20	0.0	0.0	0.0	chr1	943527	943548	(248012874)	+	(T)n	Simple_repeat	1	22	(0)	1192
15	7.6	3.6	0.0	chr1	944499	944526	(248011896)	+	(CAGCC)n	Simple_repeat	1	29	(0)	1193
2156	12.6	0.3	0.0	chr1	1859017	1859317	(247097105)	C	AluSz	SINE/Alu	(6)	306	5	2483
1386	23.6	10.9	6.3	chr1	1859318	1859401	(247097021)	+	MER119	DNA/hAT-Charlie	412	478	(105)	2482
387	10.4	30.8	4.2	chr1	1859402	1859497	(247096925)	+	AluJo	SINE/Alu	1	133	(179)	2484
183	34.1	1.1	3.2	chr1	1896044	1896137	(247060285)	+	OldhAT1	DNA/hAT-Ac	2083	2174	(674)	2576
12	26.1	6.2	4.8	chr1	2052425	2052521	(246903901)	+	(CCTT)n	Simple_repeat	1	103	(0)	2819
13	28.5	1.3	5.3	chr1	2052537	2052611	(246903811)	+	(CTCCCTC)n	Simple_repeat	1	76	(0)	2820
12	17.5	0.0	5.6	chr1	2208344	2208379	(246748043)	+	(CCCT)n	Simple_repeat	1	36	(0)	3003
20	10.8	0.0	0.0	chr1	2230964	2230993	(246725429)	+	(TG)n	Simple_repeat	1	30	(0)	3037
15	19.6	0.0	0.0	chr1	2305130	2305158	(246651264)	+	(CA)n	Simple_repeat	1	29	(0)	3106
180	39.2	0.4	1.7	chr1	3321269	3322241	(245634181)	+	(TG)n	Simple_repeat	1	977	(0)	3910
13	23.3	0.0	2.4	chr1	3352487	3352528	(245603894)	+	(CTTTC)n	Simple_repeat	1	42	(0)	3934
627	26.2	2.4	0.0	chr1	3429066	3429267	(245527155)	+	MLT1C	LTR/ERVL-MaLR	257	463	(4)	3986
15	25.3	3.4	2.5	chr1	3717314	3717377	(245239045)	+	G-rich	Low_complexity	1	64	(0)	4267
2106	10.2	2.9	2.3	chr1	3719937	3720215	(245236207)	C	AluSx1	SINE/Alu	(33)	279	1	4268
269	35.0	13.2	0.8	chr1	5980352	5980590	(242975832)	C	L2a	LINE/L2	(418)	3001	2729	7513
212	32.4	7.5	0.9	chr1	6204853	6204964	(242751458)	C	L2b	LINE/L2	(15)	3360	3241	7830
253	20.2	17.4	3.5	chr1	6477360	6477472	(242478950)	C	MamRep564	Unknown	(130)	227	96	8292
488	29.9	17.3	0.8	chr1	6491749	6492004	(242464418)	C	L3	LINE/CR1	(7)	4092	3786	8317
452	27.1	7.0	2.8	chr1	6497843	6498089	(242458333)	C	L1ME3A	LINE/L1	(4)	6169	5912	8329
186	27.9	4.5	5.5	chr1	6520308	6520398	(242436024)	C	OldhAT1	DNA/hAT-Ac	(731)	2117	2028	8370
12	22.1	0.0	0.0	chr1	6581962	6581993	(242374429)	+	G-rich	Low_complexity	1	32	(0)	8496
4092	8.5	1.8	0.2	chr1	8122631	8123171	(240833251)	C	MER41A	LTR/ERV1	(4)	550	1	10968
1749	26.2	8.3	6.9	chr1	8671176	8671988	(240284434)	+	Charlie17	DNA/hAT-Charlie	1537	2391	(525)	12030
706	28.7	7.6	5.3	chr1	8822715	8823111	(240133311)	+	AmnSINE1	SINE/5S-Deu-L2	144	550	(25)	12318
11	20.1	2.9	0.0	chr1	8873709	8873742	(240082680)	+	G-rich	Low_complexity	1	35	(0)	12435
1054	32.1	7.4	7.0	chr1	8963111	8963548	(239992874)	+	L2	LINE/L2	884	1308	(2111)	12643
2413	17.3	4.4	4.2	chr1	9798201	9798726	(239157696)	+	L1MB5	LINE/L1	5607	6133	(41)	14400
329	24.9	6.9	0.7	chr1	9824910	9825024	(239131398)	C	MIRb	SINE/MIR	(92)	176	51	14456
433	28.9	14.7	2.4	chr1	9825948	9826156	(239130266)	+	MIRb	SINE/MIR	12	250	(12)	14457
12	13.3	9.3	2.1	chr1	10033001	10033043	(238923379)	+	G-rich	Low_complexity	1	47	(0)	14941
628	25.6	8.2	1.0	chr1	10045893	10046261	(238910161)	C	MLT1J	LTR/ERVL-MaLR	(30)	482	71	14974
1179	23.8	14.9	4.0	chr1	10185787	10186264	(238770158)	+	L2a	LINE/L2	2884	3407	(19)	15274
202	14.6	4.7	0.0	chr1	11667538	11667578	(237288844)	C	MIR	SINE/MIR	(179)	83	41	18199
1379	25.7	11.3	0.6	chr1	11689850	11690291	(237266131)	+	L2a	LINE/L2	2916	3424	(2)	18243
576	31.2	2.6	5.2	chr1	11738553	11738785	(237217637)	C	MIRb	SINE/MIR	(39)	229	3	18354
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
381	19.6	16.0	0.4	chr1	11908990	11909143	(237047279)	C	MLT1J	LTR/ERVL-MaLR	(345)	167	1	18708
1684	16.6	3.5	1.0	chr1	12539620	12539921	(236416501)	C	AluJr	SINE/Alu	(0)	312	3	19946
481	23.5	4.3	12.0	chr1	12539922	12539985	(236416437)	+	MLT1H1	LTR/ERVL-MaLR	492	545	(4)	19945
18	19.8	0.0	4.0	chr1	12618036	12618085	(236338337)	+	(CGCT)n	Simple_repeat	1	50	(0)	20096
13	29.7	2.3	5.6	chr1	13749236	13749322	(235207100)	+	(CGC)n	Simple_repeat	1	89	(0)	21986
23	25.8	1.2	3.5	chr1	13749494	13749577	(235206845)	+	(GCCC)n	Simple_repeat	1	85	(0)	21987
494	26.1	0.0	3.6	chr1	14594104	14594242	(234362180)	+	MER94	DNA/hAT-Blackjack	1	134	(0)	23481
28	16.6	3.3	0.0	chr1	14598733	14598793	(234357629)	+	(CTC)n	Simple_repeat	1	63	(0)	23491
13	16.7	7.5	0.0	chr1	14598768	14598807	(234357615)	+	(CCG)n	Simple_repeat	1	43	(0)	23492
12	3.8	11.1	0.0	chr1	14947285	14947311	(234009111)	+	(GATG)n	Simple_repeat	1	30	(0)	24224
538	18.1	11.4	11.9	chr1	14955908	14956101	(234000321)	C	MER53	DNA/hAT	(0)	193	1	24245
1000	25.3	18.5	1.3	chr1	15196902	15197374	(233759048)	C	MLT1K	LTR/ERVL-MaLR	(10)	585	13	24759
354	26.2	0.0	0.0	chr1	15459756	15459835	(233496587)	+	MER96B	DNA/hAT-Tip100	3	82	(335)	25304
755	17.2	2.3	0.0	chr1	15459836	15459963	(233496459)	+	FLAM_A	SINE/Alu	1	131	(11)	25305
261	24.6	0.0	0.0	chr1	15460016	15460072	(233496350)	C	AluSz6	SINE/Alu	(13)	299	243	25306
279	32.2	4.0	1.6	chr1	15460088	15460210	(233496212)	C	MIRb	SINE/MIR	(91)	177	52	25307
12	31.0	0.0	1.9	chr1	15524014	15524066	(233432356)	+	G-rich	Low_complexity	1	53	(0)	25466
2385	20.6	3.4	1.3	chr1	15596411	15596873	(233359549)	+	MER21C	LTR/ERVL	358	830	(108)	25632
1723	14.9	2.0	5.8	chr1	15963829	15964137	(232992285)	+	AluJo	SINE/Alu	6	302	(10)	26411
549	26.9	7.9	5.4	chr1	15964138	15964278	(232992144)	+	L1ME3F	LINE/L1	1778	1928	(5175)	26410
472	31.4	5.5	3.8	chr1	16123696	16124012	(232832410)	+	MIRb	SINE/MIR	17	262	(6)	26738
193	32.9	6.8	2.9	chr1	16151110	16151253	(232805169)	C	MIR3	SINE/MIR	(74)	156	1	26794
2416	8.3	0.0	0.6	chr1	16154472	16154783	(232801639)	+	AluSq2	SINE/Alu	1	310	(3)	26798
497	24.8	9.8	9.0	chr1	16164128	16164371	(232792051)	+	L2a	LINE/L2	3179	3424	(2)	26821
623	24.9	3.9	13.2	chr1	16199663	16200092	(232756330)	+	L2b	LINE/L2	2799	3191	(235)	26920
1480	12.2	16.3	1.2	chr1	16275727	16275981	(232680441)	+	AluSx	SINE/Alu	1	301	(11)	27081
265	34.1	8.0	3.6	chr1	16488663	16488962	(232467460)	+	L2c	LINE/L2	2997	3308	(79)	27605
32	11.8	2.9	2.9	chr1	16499333	16499400	(232457022)	+	(GGCCGG)n	Simple_repeat	1	70	(0)	27637
2358	10.0	0.0	0.0	chr1	16620824	16621124	(232335298)	C	AluSc8	SINE/Alu	(10)	301	1	27833
293	37.7	1.4	0.0	chr1	16621175	16621312	(232335110)	C	MER91B	DNA/hAT-Tip100	(50)	140	1	27834
304	30.7	1.7	0.9	chr1	16904653	16904767	(232051655)	+	Charlie4a	DNA/hAT-Charlie	385	500	(8)	28227
386	30.3	11.6	5.9	chr1	17121462	17121647	(231834775)	C	MIR	SINE/MIR	(0)	262	65	28725
254	26.1	8.2	1.5	chr1	17552175	17552309	(231404113)	+	MIRc	SINE/MIR	3	155	(113)	29713
1866	16.4	0.0	4.6	chr1	17716106	17716429	(231239993)	+	AluJr	SINE/Alu	1	309	(3)	30057
307	25.9	4.0	16.1	chr1	18973311	18973540	(229982882)	+	L2c	LINE/L2	2935	3135	(252)	32817
270	28.6	16.5	1.7	chr1	20725447	20725677	(228230745)	C	L2b	LINE/L2	(80)	3295	3024	36430
647	30.7	7.5	5.3	chr1	21304346	21304574	(227651848)	+	Charlie8	DNA/hAT-Charlie	155	386	(2042)	37617
795	21.1	7.3	6.2	chr1	21304577	21304818	(227651604)	+	L1ME2	LINE/L1	5919	6163	(1)	37620
354	32.2	7.9	2.9	chr1	21334877	21335116	(227621306)	+	L2	LINE/L2	2745	2997	(422)	37696
319	25.0	0.0	3.5	chr1	21335828	21335914	(227620508)	C	MIR3	SINE/MIR	(54)	154	71	37698
613	24.0	18.5	0.7	chr1	21534881	21535122	(227421300)	+	L2a	LINE/L2	3139	3423	(3)	38106
412	32.2	6.9	2.9	chr1	21569858	21570158	(227386264)	+	L2b	LINE/L2	2941	3277	(110)	38206
14	10.4	6.2	0.0	chr1	21591155	21591160	(227365262)	+	(AATGAT)n	Simple_repeat	1	33	(0)	38251
13	13.7	0.0	0.0	chr1	21591161	21591185	(227365237)	+	(TAA)n	Simple_repeat	1	25	(0)	38252
1985	8.3	0.0	4.0	chr1	22451392	22451668	(226504754)	+	AluSq	SINE/Alu	40	305	(8)	40206
14	4.0	3.6	3.5	chr1	22673605	22673632	(226282790)	+	(CTCTC)n	Simple_repeat	1	29	(0)	40649
210	32.5	7.9	0.0	chr1	22826807	22826923	(226129499)	+	L2b	LINE/L2	3230	3356	(19)	41029
224	22.9	7.9	1.4	chr1	23212102	23212172	(225744250)	+	L2b	LINE/L2	3007	3082	(305)	41886
913	18.2	3.3	0.0	chr1	23352332	23352479	(225603943)	+	AluJr	SINE/Alu	137	289	(23)	42213
220	29.1	5.5	3.7	chr1	23403929	23404035	(225552387)	+	MamRTE1	LINE/RTE-BovB	1016	1124	(2688)	42329
271	24.4	1.3	3.7	chr1	23528195	23528275	(225428147)	+	MIR3	SINE/MIR	20	98	(110)	42647
939	8.3	0.0	0.8	chr1	23528943	23529063	(225427359)	+	AluJo	SINE/Alu	13	132	(180)	42649
247	28.0	3.9	0.0	chr1	23555538	23555612	(225400810)	C	MIRb	SINE/MIR	(57)	211	134	42732
294	29.5	6.2	11.4	chr1	23555708	23555948	(225400474)	+	MIRb	SINE/MIR	2	232	(36)	42733
1660	10.4	12.5	0.8	chr1	23564549	23564816	(225391606)	C	AluSz	SINE/Alu	(8)	304	1	42750
440	28.6	22.4	0.7	chr1	23591202	23591490	(225364932)	+	L2a	LINE/L2	3032	3401	(25)	42817
380	26.7	8.8	11.7	chr1	23718425	23718743	(225237679)	C	L2a	LINE/L2	(123)	3264	2954	43185
3517	14.8	1.6	1.8	chr1	23772675	23773244	(225183178)	C	Tigger7	DNA/TcMar-Tigger	(1913)	578	10	43329
376	34.4	2.2	0.0	chr1	23773280	23773410	(225183012)	C	MIR	SINE/MIR	(29)	233	100	43330
227	29.8	1.0	14.1	chr1	24009419	24009539	(224946883)	C	L2b	LINE/L2	(0)	3387	3283	43909
717	29.9	15.9	2.1	chr1	24043209	24043690	(224912732)	+	L2a	LINE/L2	2710	3256	(170)	44000
1808	14.4	7.0	0.7	chr1	24504176	24504467	(224451955)	C	AluJb	SINE/Alu	(0)	312	1	45046
863	18.4	4.3	3.8	chr1	24725230	24725415	(224231007)	C	MIR	SINE/MIR	(74)	188	2	45578
21	4.0	0.0	0.0	chr1	24736309	24736334	(224220088)	+	(AG)n	Simple_repeat	1	26	(0)	45612
18	30.9	1.9	0.0	chr1	24736334	24736385	(224220037)	+	(GT)n	Simple_repeat	1	53	(0)	45613
227	40.0	0.0	0.0	chr1	24736432	24736506	(224219916)	+	MIR3	SINE/MIR	16	90	(118)	45614
1830	24.0	6.2	1.1	chr1	24741915	24742377	(224214045)	C	L2a	LINE/L2	(7)	3419	2932	45637
13	0.0	0.0	0.0	chr1	24929788	24929804	(224026618)	+	(GCC)n	Simple_repeat	1	17	(0)	46009
1710	15.8	0.7	6.1	chr1	25139701	25140029	(223816393)	C	AluJr	SINE/Alu	(1)	311	1	46456
491	29.4	10.2	3.6	chr1	25140043	25140261	(223816161)	C	MIRb	SINE/MIR	(0)	268	34	46457
716	14.5	6.8	0.0	chr1	25204879	25205002	(223751420)	C	MER5A	DNA/hAT-Charlie	(56)	133	1	46598
3735	15.8	11.5	1.2	chr1	25232782	25233512	(223722910)	+	LTR8B	LTR/ERV1	2	817	(3)	46664
1649	22.9	12.0	3.0	chr1	25355817	25356605	(223599817)	+	L2a	LINE/L2	2486	3421	(5)	46957
457	16.1	13.2	2.6	chr1	25774347	25774461	(223181961)	C	MIRc	SINE/MIR	(112)	156	28	47803
667	21.6	6.7	1.2	chr1	25774574	25774742	(223181680)	C	MIRb	SINE/MIR	(35)	233	55	47804
255	31.6	6.1	2.7	chr1	25892427	25892555	(223063867)	+	MIR3	SINE/MIR	33	170	(98)	48044
241	32.0	10.3	0.0	chr1	26035535	26035656	(222920766)	+	L2c	LINE/L2	3030	3165	(222)	48399
323	25.9	2.4	1.2	chr1	26081538	26081619	(222874803)	C	MIRc	SINE/MIR	(170)	98	16	48513
197	31.0	3.3	0.0	chr1	26470773	26470830	(222485592)	C	MER131	DNA?	(154)	61	2	49428
16	24.1	0.0	2.2	chr1	26697154	26697199	(222259223)	+	(CCT)n	Simple_repeat	1	46	(0)	50006
13	14.2	3.2	0.0	chr1	26697262	26697292	(222259130)	+	(CCCCAC)n	Simple_repeat	1	32	(0)	50007
219	30.0	1.2	3.6	chr1	26787534	26787616	(222168806)	C	L2b	LINE/L2	(19)	3356	3276	50166
937	12.6	0.0	2.2	chr1	26861745	26861879	(222094543)	+	FLAM_C	SINE/Alu	1	132	(11)	50322
252	30.9	20.2	1.8	chr1	27095897	27096061	(221860361)	+	LTR33	LTR/ERVL	101	303	(212)	50915
13	10.1	5.9	2.8	chr1	27122850	27122883	(221833539)	+	G-rich	Low_complexity	1	36	(0)	50979
21	4.0	0.0	0.0	chr1	27496836	27496861	(221459561)	+	(TC)n	Simple_repeat	1	26	(0)	51876
211	24.0	0.0	0.0	chr1	27496959	27497013	(221459409)	+	L2a	LINE/L2	3036	3090	(285)	51877
13	0.0	0.0	0.0	chr1	27575174	27575190	(221381232)	+	(CCG)n	Simple_repeat	1	17	(0)	52049
188	21.2	7.0	0.6	chr1	27576188	27576246	(221380176)	+	MIR3	SINE/MIR	117	177	(85)	52051
231	23.8	5.6	6.7	chr1	27576264	27576353	(221380069)	+	MIR3	SINE/MIR	79	167	(41)	52052
21	15.3	1.8	5.2	chr1	27603927	27603983	(221352439)	+	(TCCC)n	Simple_repeat	1	58	(0)	52103
19	22.0	6.9	4.8	chr1	27604061	27604176	(221352246)	+	(CCTCGC)n	Simple_repeat	1	124	(0)	52104
246	25.0	12.4	2.4	chr1	27650813	27650935	(221305487)	C	LTR16E1	LTR/ERVL	(32)	506	370	52217
230	35.1	0.0	2.5	chr1	27934791	27934869	(221021553)	+	L2c	LINE/L2	3123	3199	(176)	52885
1573	26.7	12.4	2.6	chr1	27956621	27957726	(220998696)	C	L2a	LINE/L2	(1)	3425	2189	52949
211	31.2	6.0	6.0	chr1	28517593	28517742	(220438680)	+	L2	LINE/L2	2814	2963	(456)	54410
386	7.4	0.0	1.8	chr1	28747554	28747608	(220208814)	C	AluY	SINE/Alu	(4)	297	244	55039
814	9.2	0.0	0.0	chr1	28747609	28747717	(220208705)	C	AluY	SINE/Alu	(202)	109	1	55039
267	27.8	3.2	0.0	chr1	29459548	29459637	(219496785)	C	MIR	SINE/MIR	(70)	192	100	56649
351	29.1	8.5	3.2	chr1	30782659	30782814	(218173608)	C	MIR3	SINE/MIR	(0)	208	44	59056
17	17.3	4.2	2.0	chr1	30915100	30915147	(218041275)	+	GA-rich	Low_complexity	1	50	(0)	59379
19	20.2	1.9	1.9	chr1	31239829	31239881	(217716541)	+	(GCGCGGA)n	Simple_repeat	1	54	(0)	60222
15	16.9	0.0	0.0	chr1	31239862	31239894	(217716528)	+	(AGCGC)n	Simple_repeat	1	33	(0)	60223
19	17.9	2.4	8.3	chr1	31239969	31240050	(217716372)	+	G-rich	Low_complexity	1	84	(0)	60224
869	24.4	3.5	1.3	chr1	31240054	31240277	(217716145)	+	MIRb	SINE/MIR	3	231	(37)	60225
346	32.4	7.7	5.7	chr1	31666239	31666608	(217289814)	+	L2a	LINE/L2	2705	3082	(337)	61122
396	32.4	14.1	2.1	chr1	31666681	31667005	(217289417)	+	L2a	LINE/L2	3057	3426	(0)	61122
629	31.0	8.3	0.5	chr1	31751891	31752124	(217204298)	C	MIRb	SINE/MIR	(8)	260	1	61258
750	18.6	2.2	0.6	chr1	31783352	31783529	(217172893)	+	L1MA7	LINE/L1	6111	6291	(0)	61308
243	20.9	7.4	0.0	chr1	31788876	31788957	(217167465)	C	MIRc	SINE/MIR	(54)	176	83	61315
438	25.8	5.0	3.0	chr1	31935484	31935635	(217020787)	+	MIRb	SINE/MIR	3	144	(118)	61644
16	4.5	4.3	0.0	chr1	32343455	32343477	(216612945)	+	(CT)n	Simple_repeat	1	24	(0)	62666
22	13.1	5.7	1.8	chr1	32343631	32343683	(216612739)	+	(TTTC)n	Simple_repeat	1	56	(0)	62667
17	22.7	1.9	1.9	chr1	32754890	32754942	(216201480)	+	(CCCCCG)n	Simple_repeat	1	54	(0)	63660
12	11.1	0.0	8.6	chr1	32973105	32973139	(215983283)	+	(GCCCCC)n	Simple_repeat	1	35	(0)	64134
347	29.5	12.8	2.6	chr1	33118494	33118723	(215837699)	C	L2b	LINE/L2	(457)	2962	2706	64477
1114	18.4	0.9	1.8	chr1	33153390	33153610	(215802812)	+	MER20	DNA/hAT-Charlie	1	219	(0)	64555
525	26.8	11.8	3.0	chr1	33182274	33182542	(215773880)	+	Charlie16a	DNA/hAT-Charlie	47	342	(0)	64627
2256	10.1	0.0	0.0	chr1	33263414	33263710	(215692712)	C	AluSx	SINE/Alu	(15)	297	1	64809
379	33.1	2.5	1.9	chr1	35079020	35079179	(213877243)	C	MIR	SINE/MIR	(87)	175	15	67987
1784	9.4	3.5	0.0	chr1	35642608	35642852	(213313570)	+	AluSx3	SINE/Alu	54	307	(4)	69126
15	10.3	3.0	2.9	chr1	36136770	36136802	(212819620)	+	(CCTC)n	Simple_repeat	1	34	(0)	70207
351	30.0	5.9	1.6	chr1	36223857	36224071	(212732351)	C	MIRc	SINE/MIR	(9)	259	29	70423
7043	15.9	6.1	3.6	chr1	36400551	36401780	(212554642)	C	LTR2752	LTR/ERV1	(0)	1263	1	70791
506	31.2	4.5	1.5	chr1	36842722	36842916	(212113506)	C	MIRb	SINE/MIR	(65)	203	3	71669
208	20.2	3.3	1.1	chr1	37177330	37177415	(211779007)	C	L2a	LINE/L2	(317)	3109	3021	72251
12	8.1	3.6	3.5	chr1	38006427	38006454	(210949968)	+	GA-rich	Low_complexity	1	29	(0)	73901
354	32.2	2.8	5.0	chr1	38785349	38785567	(210170855)	C	MamRep434	DNA/TcMar-Tigger	(154)	272	59	75329
732	23.3	10.4	4.9	chr1	38785727	38786230	(210170192)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	1	75330
636	34.6	9.1	8.1	chr1	38986189	38986774	(209969648)	+	L2c	LINE/L2	2709	3362	(13)	75792
14	23.4	6.8	2.5	chr1	39408963	39408984	(209547438)	+	(TCGTCC)n	Simple_repeat	23	79	(0)	76677
14	14.1	7.7	0.0	chr1	39409005	39409043	(209547379)	+	(GGCGC)n	Simple_repeat	1	42	(0)	76679
12	19.7	2.3	4.4	chr1	39409058	39409101	(209547321)	+	(AGCC)n	Simple_repeat	1	45	(0)	76680
15	16.9	0.0	0.0	chr1	39491773	39491805	(209464617)	+	(AGCGTC)n	Simple_repeat	1	33	(0)	76794
837	15.8	2.7	7.1	chr1	39568282	39568405	(209388017)	+	MER5A	DNA/hAT-Charlie	71	189	(0)	76940
13	23.1	1.8	5.3	chr1	40373648	40373703	(208582719)	+	G-rich	Low_complexity	1	57	(0)	78695
1855	11.3	9.8	0.0	chr1	40379556	40379830	(208576592)	C	AluSx1	SINE/Alu	(6)	306	2	78705
13	8.1	0.0	6.7	chr1	43069931	43069960	(205886462)	+	(GGCCA)n	Simple_repeat	1	30	(0)	83716
214	28.8	3.0	1.5	chr1	43070098	43070164	(205886258)	+	MIR3	SINE/MIR	138	205	(3)	83717
38	0.0	2.6	0.0	chr1	43453835	43453873	(205502549)	+	(GGCGGCG)n	Simple_repeat	1	40	(0)	84327
13	13.2	6.1	0.0	chr1	44031405	44031437	(204924985)	+	(GCCGC)n	Simple_repeat	1	35	(0)	85307
207	21.2	0.0	0.0	chr1	44032159	44032201	(204924221)	+	MIRc	SINE/MIR	115	157	(51)	85308
437	31.9	8.5	0.6	chr1	44036804	44036986	(204919436)	C	MIRb	SINE/MIR	(34)	234	36	85311
2237	14.6	6.1	3.1	chr1	44275857	44276272	(204680150)	C	MSTB1	LTR/ERVL-MaLR	(3)	429	1	85771
294	24.8	9.5	2.8	chr1	44328236	44328343	(204628079)	C	MIRc	SINE/MIR	(36)	232	117	85829
723	17.8	1.4	4.6	chr1	44328362	44328514	(204627908)	+	MER5A	DNA/hAT-Charlie	42	189	(0)	85830
30	21.0	0.0	0.0	chr1	44405166	44405226	(204551196)	+	(TG)n	Simple_repeat	1	61	(0)	85972
16	14.2	0.0	0.0	chr1	44405661	44405691	(204550731)	+	(GGACTG)n	Simple_repeat	1	31	(0)	85974
13	25.4	0.0	4.0	chr1	44406210	44406259	(204550163)	+	G-rich	Low_complexity	1	50	(0)	85975
15	18.0	5.6	3.5	chr1	44602941	44602994	(204353428)	+	(CCT)n	Simple_repeat	1	57	(0)	86353
17	38.9	0.0	1.2	chr1	44618254	44618335	(204338087)	+	(CA)n	Simple_repeat	1	82	(0)	86381
518	20.2	1.8	6.0	chr1	44732195	44732310	(204224112)	+	MER39	LTR/ERV1	361	471	(236)	86592
2173	7.2	1.4	0.3	chr1	44732313	44732602	(204223820)	C	AluY	SINE/Alu	(17)	294	2	86593
2314	8.2	0.3	0.0	chr1	44818905	44819195	(204137227)	+	AluSc8	SINE/Alu	1	292	(19)	86769
228	26.7	3.2	0.0	chr1	46203085	46203144	(202753278)	C	L2c	LINE/L2	(5)	3370	3309	89544
320	33.7	4.1	1.6	chr1	46298715	46298871	(202657551)	+	L2c	LINE/L2	2901	3077	(342)	89746
366	31.7	3.4	2.7	chr1	46522311	46522456	(202433966)	+	MIRb	SINE/MIR	73	219	(49)	90190
917	18.3	12.4	7.6	chr1	46691190	46691426	(202264996)	C	MLT1H2	LTR/ERVL-MaLR	(4)	485	236	90487
2569	21.5	7.0	5.2	chr1	46691965	46692715	(202263707)	C	L1ME1	LINE/L1	(6)	6173	5408	90489
736	20.0	6.9	8.1	chr1	46719502	46719614	(202236808)	C	L2a	LINE/L2	(0)	3426	3316	90532
232	30.1	8.2	8.2	chr1	47448832	47448990	(201507432)	+	MIR3	SINE/MIR	15	173	(35)	91613
23	15.8	2.0	0.0	chr1	47997587	47997635	(200958787)	+	(CGCT)n	Simple_repeat	1	50	(0)	92702
20	14.5	0.0	5.9	chr1	47997697	47997748	(200958674)	+	(CCTCC)n	Simple_repeat	1	48	(0)	92703
728	32.3	1.8	0.0	chr1	48529367	48529583	(200426839)	C	MIRb	SINE/MIR	(47)	221	1	93456
13	23.3	0.0	0.0	chr1	51236363	51236397	(197720025)	+	(GCA)n	Simple_repeat	1	35	(0)	98248
182	31.8	1.6	0.0	chr1	51264444	51264506	(197691916)	C	MIR3	SINE/MIR	(11)	197	134	98325
262	33.8	12.5	0.2	chr1	51331741	51332014	(197624408)	C	L2b	LINE/L2	(115)	3272	2968	98456
253	29.3	1.2	1.2	chr1	51332022	51332104	(197624318)	+	L2b	LINE/L2	3009	3091	(284)	98457
249	15.6	5.9	1.5	chr1	51332127	51332189	(197624233)	C	Arthur1C	DNA/hAT-Tip100	(20)	343	278	98458
400	13.8	0.0	0.0	chr1	51332190	51332247	(197624175)	+	Tigger4b	DNA/TcMar-Tigger	1	58	(303)	98459
15	14.1	1.7	10.2	chr1	51519284	51519341	(197437081)	+	G-rich	Low_complexity	1	59	(0)	98833
2328	17.3	11.8	4.2	chr1	51622406	51622925	(197333497)	C	MLT1F1	LTR/ERVL-MaLR	(4)	565	1	99119
800	22.9	5.9	6.3	chr1	51637078	51637210	(197319212)	+	MIR	SINE/MIR	14	149	(113)	99154
1967	11.6	6.1	0.0	chr1	51637211	51637503	(197318919)	+	AluSq	SINE/Alu	2	313	(0)	99155
301	28.7	3.6	1.8	chr1	51875196	51875305	(197081117)	C	Charlie15a	DNA/hAT-Charlie	(4)	220	109	99618
197	29.2	6.5	1.4	chr1	51875327	51875399	(197081023)	C	MIR3	SINE/MIR	(49)	159	83	99619
12	23.2	0.0	4.5	chr1	51878751	51878794	(197077628)	+	(CCCTCCG)n	Simple_repeat	1	44	(0)	99630
588	28.7	6.9	5.7	chr1	51957424	51957667	(196998755)	+	MIRb	SINE/MIR	7	253	(15)	99825
361	27.2	7.5	1.8	chr1	52663205	52663370	(196293052)	C	MIR1_Amn	SINE/MIR	(51)	179	1	101392
708	29.9	10.2	3.0	chr1	53125972	53126409	(195830013)	C	MamRep137	DNA/TcMar-Tigger	(36)	474	2	102488
555	26.6	4.6	2.4	chr1	53295656	53295867	(195660555)	C	MER103C	DNA/hAT-Charlie	(80)	217	1	102817
256	28.8	2.4	0.0	chr1	53295876	53295955	(195660467)	C	MIR3	SINE/MIR	(56)	152	71	102818
17	20.5	1.6	6.2	chr1	53328160	53328222	(195628200)	+	(CCT)n	Simple_repeat	1	64	(0)	102876
246	27.4	5.6	2.9	chr1	53328347	53328485	(195627937)	C	L2c	LINE/L2	(222)	3165	3023	102877
27	0.0	0.0	0.0	chr1	54284104	54284129	(194672293)	+	(T)n	Simple_repeat	1	26	(0)	104795
625	14.6	12.0	0.0	chr1	54284131	54284233	(194672189)	C	AluJr	SINE/Alu	(195)	117	1	104796
359	28.1	0.0	1.9	chr1	54285871	54285975	(194670447)	+	MIR3	SINE/MIR	78	180	(28)	104803
30	0.0	0.0	0.0	chr1	54407750	54407777	(194548645)	+	(T)n	Simple_repeat	1	28	(0)	105002
2287	11.5	1.0	0.0	chr1	54493177	54493480	(194462942)	+	AluSx	SINE/Alu	1	307	(5)	105212
486	36.1	3.1	4.1	chr1	54493486	54493927	(194462495)	+	L2c	LINE/L2	2918	3364	(11)	105213
1489	21.2	10.1	2.9	chr1	54995228	54995963	(193960459)	C	L2a	LINE/L2	(49)	3377	2587	106317
14	15.4	9.8	3.0	chr1	57620695	57620755	(191335667)	+	(AGCAGAG)n	Simple_repeat	1	67	(0)	111186
12	0.0	0.0	5.0	chr1	57620748	57620767	(191335655)	+	(AGG)n	Simple_repeat	1	20	(0)	111187
13	22.5	2.8	6.8	chr1	57620756	57620765	(191335657)	+	(AGCAGG)n	Simple_repeat	1	73	(0)	111188
425	29.8	4.4	2.6	chr1	59078420	59078574	(189877848)	+	MIRb	SINE/MIR	40	197	(71)	114146
417	30.6	8.5	5.0	chr1	59354641	59355188	(189601234)	C	L2a	LINE/L2	(5)	3421	2772	114727
1292	34.1	3.3	3.4	chr1	59831163	59831882	(189124540)	C	L1ME1	LINE/L1	(5626)	774	63	115515
15	19.2	4.1	2.0	chr1	61050196	61050245	(187906177)	+	(CCCTCT)n	Simple_repeat	1	51	(0)	117591
13	9.7	0.0	0.0	chr1	63774051	63774072	(185182350)	+	(GCC)n	Simple_repeat	1	22	(0)	122681
313	33.2	1.9	11.1	chr1	64223655	64223888	(184732534)	C	L2c	LINE/L2	(150)	3237	3026	123502
2214	13.3	10.3	2.3	chr1	64507909	64508301	(184448121)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	124018
13	9.8	0.0	0.0	chr1	65002691	65002712	(183953710)	+	(CGG)n	Simple_repeat	1	22	(0)	124874
19	0.0	0.0	0.0	chr1	65003014	65003034	(183953388)	+	(T)n	Simple_repeat	1	21	(0)	124875
23	15.3	0.0	5.4	chr1	65066726	65066781	(183889641)	+	(TCC)n	Simple_repeat	1	56	(0)	125013
18	21.5	0.0	0.0	chr1	65148145	65148187	(183808235)	+	GA-rich	Low_complexity	1	43	(0)	125212
12	22.0	2.7	0.0	chr1	65148891	65148927	(183807495)	+	(CCGTACC)n	Simple_repeat	1	38	(0)	125213
435	29.1	10.0	3.3	chr1	65173876	65173998	(183782424)	C	LTR85c	LTR/Gypsy?	(300)	523	388	125270
323	29.6	6.1	2.9	chr1	65470868	65471041	(183485381)	C	MARNA	DNA/TcMar-Mariner	(273)	313	134	125833
18	22.1	2.1	0.0	chr1	67833185	67833232	(181123190)	+	(CTTC)n	Simple_repeat	1	49	(0)	129656
16	24.3	3.3	1.6	chr1	67833273	67833332	(181123090)	+	(CGCCG)n	Simple_repeat	1	62	(0)	129657
18	34.0	0.0	0.0	chr1	68232582	68232644	(180723778)	+	(CCTT)n	Simple_repeat	1	63	(0)	130268
2264	17.1	2.6	1.7	chr1	76239342	76239763	(172716659)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	141149
250	17.8	0.0	0.0	chr1	80054081	80054125	(168902297)	+	HERVL18-int	LTR/ERVL	5946	5990	(57)	146672
2237	14.6	2.2	0.6	chr1	80054238	80054588	(168901834)	+	LTR18A	LTR/ERVL	1	357	(0)	146674
13	18.9	2.8	0.0	chr1	81238032	81238072	(167718350)	+	(TTTGTT)n	Simple_repeat	1	42	(0)	148175
24	10.8	0.0	0.0	chr1	81801412	81801451	(167154971)	+	(TCTC)n	Simple_repeat	1	40	(0)	149030
594	25.7	10.3	0.0	chr1	84103590	84103764	(164852658)	+	MLT1G	LTR/ERVL-MaLR	397	591	(0)	152069
13	23.3	2.5	0.0	chr1	84690281	84690320	(164266102)	+	(CGCC)n	Simple_repeat	1	41	(0)	152919
18	7.5	0.0	0.0	chr1	84893245	84893272	(164063150)	+	(GCCCC)n	Simple_repeat	1	28	(0)	153270
21	29.4	0.0	0.0	chr1	85201169	85201234	(163755188)	+	(TCG)n	Simple_repeat	1	66	(0)	153784
25964	3.7	0.1	0.3	chr1	85641867	85648021	(163308401)	+	L1PA3	LINE/L1	7	6152	(3)	154506
209	33.3	0.0	0.0	chr1	86779408	86779473	(162176949)	C	L2b	LINE/L2	(214)	3161	3096	156085
190	31.6	7.9	2.5	chr1	87115449	87115568	(161840854)	C	MamTip2	DNA/hAT-Tip100	(156)	149	23	156609
16	16.9	8.3	3.9	chr1	87331365	87331436	(161624986)	+	(CTCCCGT)n	Simple_repeat	1	78	(0)	156912
15	15.5	0.0	5.0	chr1	87331556	87331595	(161624827)	+	G-rich	Low_complexity	1	40	(0)	156913
12	20.4	5.6	3.5	chr1	88684485	88684538	(160271884)	+	(CTCTCCC)n	Simple_repeat	1	57	(0)	158816
556	27.1	3.2	2.6	chr1	89709194	89709348	(159247074)	+	MIRc	SINE/MIR	8	163	(105)	160223
245	19.3	3.3	1.7	chr1	89710162	89710231	(159246191)	+	MIRc	SINE/MIR	159	222	(46)	160223
1514	28.4	11.5	3.0	chr1	91894032	91894785	(157061637)	+	L2a	LINE/L2	1437	2271	(1148)	163428
2346	7.8	0.0	0.0	chr1	91894786	91895068	(157061354)	C	AluSc8	SINE/Alu	(27)	284	2	163429
13	9.7	0.0	0.0	chr1	93180359	93180380	(155776042)	+	(GGC)n	Simple_repeat	1	22	(0)	165855
329	30.6	1.5	3.6	chr1	93565956	93566094	(155390328)	+	L2	LINE/L2	2729	2864	(555)	166502
14	15.4	6.7	2.1	chr1	93680930	93680974	(155275448)	+	(CCTTC)n	Simple_repeat	1	48	(0)	166665
29	0.0	0.0	0.0	chr1	93847897	93847923	(155108499)	+	(GCG)n	Simple_repeat	1	27	(0)	166926
305	28.0	3.3	2.5	chr1	93848110	93848230	(155108192)	C	MER5A	DNA/hAT-Charlie	(16)	173	52	166927
13	8.3	0.0	6.7	chr1	94783666	94783695	(154172727)	+	(AGCC)n	Simple_repeat	1	30	(0)	168303
13	23.7	1.9	3.7	chr1	94927275	94927327	(154029095)	+	(CCCGCC)n	Simple_repeat	1	54	(0)	168517
839	28.3	4.8	0.0	chr1	100324801	100325037	(148631385)	C	MIR	SINE/MIR	(2)	260	12	176392
12	12.6	3.7	0.0	chr1	107056667	107056693	(141899729)	+	(CCGCG)n	Simple_repeat	1	28	(0)	184892
22	16.6	0.0	2.0	chr1	107140111	107140159	(141816263)	+	(AGCAGC)n	Simple_repeat	1	49	(0)	185027
14	8.7	0.0	3.7	chr1	108595617	108595643	(140360779)	+	(AGGG)n	Simple_repeat	1	27	(0)	186976
14	8.7	0.0	3.7	chr1	108595707	108595733	(140360689)	+	(AGGG)n	Simple_repeat	1	27	(0)	186976
13	9.6	0.0	0.0	chr1	108595755	108595777	(140360645)	+	(GGAG)n	Simple_repeat	1	23	(0)	186977
2715	19.6	5.5	7.2	chr1	108750530	108751352	(140205070)	C	MER21C	LTR/ERVL	(33)	905	6	187263
2223	11.2	0.3	0.6	chr1	109100807	109101119	(139855303)	C	AluJb	SINE/Alu	(0)	312	1	187986
29	18.2	1.6	0.0	chr1	109484573	109484634	(139471788)	+	(TCCA)n	Simple_repeat	1	63	(0)	188669
35	8.8	0.0	0.0	chr1	109910719	109910766	(139045656)	+	(GT)n	Simple_repeat	1	48	(0)	189268
16	27.0	0.0	5.8	chr1	110034688	110034756	(138921666)	+	(GCC)n	Simple_repeat	1	69	(0)	189456
16	21.9	0.0	6.7	chr1	110211381	110211440	(138744982)	+	(CCGCCT)n	Simple_repeat	1	60	(0)	189743
14	19.9	1.5	8.7	chr1	112396195	112396262	(136560160)	+	(GCGGA)n	Simple_repeat	1	69	(0)	193030
227	25.0	2.4	1.2	chr1	112906403	112906483	(136049939)	+	MIRc	SINE/MIR	166	247	(21)	194028
228	32.8	5.6	2.5	chr1	114105620	114105741	(134850681)	C	MIRc	SINE/MIR	(45)	223	98	196067
19	12.6	4.4	2.1	chr1	116909989	116910033	(132046389)	+	GA-rich	Low_complexity	1	47	(0)	200486
299	29.6	4.3	4.3	chr1	143721075	143721212	(105235210)	C	Charlie4a	DNA/hAT-Charlie	(8)	500	363	208225
356	30.3	9.5	3.8	chr1	145733612	145734009	(103222413)	+	L2	LINE/L2	2047	2469	(950)	211434
1344	19.3	5.5	1.4	chr1	146035370	146035649	(102920773)	C	AluJb	SINE/Alu	(14)	298	7	211987
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
2117	9.9	5.2	0.0	chr1	147085159	147085451	(101870971)	C	AluSx	SINE/Alu	(3)	309	1	213628
405	28.7	2.4	0.0	chr1	147085458	147085579	(101870843)	C	Charlie4a	DNA/hAT-Charlie	(3)	505	381	213629
20	16.6	6.8	3.9	chr1	147541295	147541367	(101415055)	+	GA-rich	Low_complexity	1	78	(0)	214260
368	31.5	0.7	0.7	chr1	148402185	148402328	(100554094)	+	Charlie4a	DNA/hAT-Charlie	362	505	(3)	215661
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
13	22.8	0.0	8.3	chr1	148951945	148952004	(100004418)	+	(GGCGG)n	Simple_repeat	1	60	(0)	216508
2195	7.8	0.0	6.3	chr1	149938634	149938952	(99017470)	+	AluSq2	SINE/Alu	5	303	(10)	218015
28	0.0	0.0	0.0	chr1	150364656	150364681	(98591741)	+	(CCG)n	Simple_repeat	1	26	(0)	218877
1623	17.7	5.1	1.4	chr1	150392583	150392864	(98563558)	+	AluJr	SINE/Alu	13	305	(7)	218950
2263	3.8	2.4	3.4	chr1	150515965	150516257	(98440165)	+	AluSg7	SINE/Alu	1	290	(19)	219233
44	3.7	3.6	0.0	chr1	150579759	150579814	(98376608)	+	(GGCCGG)n	Simple_repeat	1	58	(0)	219361
17	25.7	0.0	0.0	chr1	151282307	151282352	(97674070)	+	(GCG)n	Simple_repeat	1	46	(0)	220903
467	31.3	10.7	2.4	chr1	151370040	151370245	(97586177)	+	MIRb	SINE/MIR	5	229	(39)	221064
207	33.3	2.2	2.9	chr1	151370386	151370517	(97585905)	+	MIR	SINE/MIR	24	153	(55)	221065
655	31.7	8.4	4.6	chr1	151608253	151608677	(97347745)	+	L2c	LINE/L2	2906	3330	(57)	221587
4940	12.9	4.8	1.5	chr1	153122742	153123450	(95832972)	+	L1PBa	LINE/L1	327	1067	(5796)	223629
12	11.1	3.2	3.1	chr1	153549373	153549403	(95407019)	+	(CCACTT)n	Simple_repeat	1	32	(0)	224265
358	26.0	2.8	0.9	chr1	153698435	153698539	(95257883)	C	MIRc	SINE/MIR	(0)	268	162	224565
19	25.9	0.0	4.5	chr1	153958837	153958903	(94997519)	+	GA-rich	Low_complexity	1	67	(0)	225135
1986	9.9	0.0	4.5	chr1	154608330	154608641	(94347781)	C	AluSz	SINE/Alu	(14)	298	1	226476
30	3.1	0.0	0.0	chr1	155000642	155000674	(93955748)	+	(CCCCCCG)n	Simple_repeat	1	33	(0)	227185
15	7.6	0.0	6.2	chr1	155001128	155001159	(93955263)	+	(GAGG)n	Simple_repeat	1	32	(0)	227186
17	23.2	0.0	2.1	chr1	155017543	155017589	(93938833)	+	(GCC)n	Simple_repeat	1	47	(0)	227202
24	30.1	0.0	3.9	chr1	155051198	155051301	(93905121)	+	G-rich	Low_complexity	1	104	(0)	227264
27	18.9	1.7	0.0	chr1	155078945	155079004	(93877418)	+	(GCT)n	Simple_repeat	1	61	(0)	227304
288	32.4	12.9	1.6	chr1	155147609	155147856	(93808566)	C	L2c	LINE/L2	(191)	3196	2917	227451
20	22.8	1.8	0.0	chr1	155208685	155208740	(93747682)	+	(CCCCGC)n	Simple_repeat	1	57	(0)	227541
265	32.2	3.4	3.4	chr1	155325989	155326107	(93630315)	+	L2	LINE/L2	2783	2901	(518)	227740
32	13.5	0.0	3.2	chr1	155562416	155562477	(93393945)	+	(GGC)n	Simple_repeat	1	62	(0)	228300
14	16.7	0.0	5.3	chr1	155688320	155688357	(93268065)	+	(GGC)n	Simple_repeat	1	38	(0)	228557
401	28.1	11.7	2.9	chr1	155941017	155941230	(93015192)	C	MIRc	SINE/MIR	(41)	227	3	229152
223	21.8	14.7	5.3	chr1	156054379	156054527	(92901895)	+	MIRc	SINE/MIR	99	268	(0)	229384
11	13.2	5.7	2.7	chr1	156054978	156055012	(92901410)	+	(CGAGCGG)n	Simple_repeat	1	37	(0)	229385
594	28.8	3.0	2.5	chr1	156106986	156107188	(92849234)	+	MIRc	SINE/MIR	20	223	(45)	229497
17	18.4	0.0	4.3	chr1	156501041	156501087	(92455335)	+	G-rich	Low_complexity	1	47	(0)	230239
14	4.9	0.0	0.0	chr1	156501142	156501162	(92455260)	+	(CCGC)n	Simple_repeat	1	21	(0)	230240
230	34.0	1.0	2.9	chr1	156690377	156690479	(92265943)	+	L3b	LINE/CR1	4986	5086	(146)	230581
17	17.2	0.0	2.4	chr1	156804639	156804679	(92151743)	+	(CCTC)n	Simple_repeat	1	41	(0)	230798
2015	14.1	0.3	0.0	chr1	157273000	157273297	(91683125)	C	Tigger3b	DNA/TcMar-Tigger	(1)	1230	932	231518
2644	11.0	3.8	6.5	chr1	157273298	157273792	(91682630)	C	LTR21A	LTR/ERV1	(0)	481	1	231519
2655	15.0	3.1	3.9	chr1	157273793	157274117	(91682305)	C	HERVFH21-int	LTR/ERV1	(0)	6529	6204	231519
12	18.5	4.3	4.1	chr1	158025909	158025955	(90930467)	+	G-rich	Low_complexity	1	49	(0)	232537
324	33.5	10.0	5.7	chr1	159920836	159921082	(89035340)	C	L2c	LINE/L2	(20)	3367	3109	234961
13	21.9	1.9	5.6	chr1	159945550	159945602	(89010820)	+	(CTCCG)n	Simple_repeat	1	54	(0)	234978
17	20.4	1.9	3.6	chr1	160400510	160400563	(88555859)	+	(CCCCCG)n	Simple_repeat	1	55	(0)	235700
1579	14.5	2.8	2.1	chr1	160978553	160978597	(87977825)	+	MER34C2	LTR/ERV1	417	459	(96)	236607
1764	17.1	0.7	1.0	chr1	160978655	160978952	(87977470)	+	AluJb	SINE/Alu	4	300	(12)	236609
465	30.4	12.8	1.1	chr1	161133306	161133568	(87822854)	C	L2	LINE/L2	(462)	2957	2660	236932
205	32.6	2.3	2.3	chr1	161750401	161750488	(87205934)	C	L2c	LINE/L2	(62)	3325	3238	238034
29	0.0	0.0	0.0	chr1	162069751	162069777	(86886645)	+	(CCGCCA)n	Simple_repeat	1	27	(0)	238552
553	32.8	6.2	6.0	chr1	162146208	162146710	(86809712)	C	L1MEb	LINE/L1	(5486)	584	81	238658
475	25.6	12.0	4.2	chr1	162207400	162207636	(86748786)	+	MIRb	SINE/MIR	4	261	(7)	238747
14	20.9	4.5	0.0	chr1	164651557	164651600	(84304822)	+	GA-rich	Low_complexity	1	46	(0)	242446
16	20.6	0.0	4.2	chr1	165376796	165376843	(83579579)	+	(CCTC)n	Simple_repeat	1	48	(0)	243522
12	8.4	0.0	6.9	chr1	165631569	165631597	(83324825)	+	(CCTT)n	Simple_repeat	1	29	(0)	243994
12	24.1	0.0	2.4	chr1	166839354	166839394	(82117028)	+	(GGCGCC)n	Simple_repeat	1	41	(0)	245775
398	19.6	20.3	2.3	chr1	166876656	166876832	(82079590)	+	L2a	LINE/L2	3208	3424	(2)	245817
2301	10.3	1.0	0.0	chr1	167263238	167263529	(81692893)	+	AluSq2	SINE/Alu	1	295	(18)	246440
190	33.3	1.5	0.0	chr1	167553987	167554052	(81402370)	C	MIRc	SINE/MIR	(124)	144	78	246883
2048	7.2	5.8	4.6	chr1	167716307	167716611	(81239811)	C	AluSx1	SINE/Alu	(3)	309	1	247183
188	28.2	1.3	4.9	chr1	168137392	168137473	(80818949)	C	L2b	LINE/L2	(1)	3374	3296	247861
276	21.7	17.0	3.0	chr1	168179549	168179695	(80776727)	C	L2c	LINE/L2	(38)	3349	3196	247956
346	25.5	18.5	3.7	chr1	168623497	168623648	(80332774)	+	MIRc	SINE/MIR	6	175	(55)	248661
13	17.7	5.3	0.0	chr1	169105812	169105849	(79850573)	+	(GCAGGA)n	Simple_repeat	1	40	(0)	249447
678	19.9	0.8	19.3	chr1	171507036	171507112	(77449310)	C	L1MEc	LINE/L1	(5654)	746	688	252864
555	19.6	12.2	1.0	chr1	171507113	171507214	(77449208)	+	FLAM_A	SINE/Alu	1	115	(27)	252867
262	30.9	8.4	1.3	chr1	171742512	171742665	(77213757)	C	MIR3	SINE/MIR	(11)	197	32	253261
17	29.0	0.0	1.7	chr1	172533154	172533213	(76423209)	+	(GGC)n	Simple_repeat	1	60	(0)	254353
13	13.2	0.0	0.0	chr1	172533420	172533444	(76422978)	+	(GAA)n	Simple_repeat	1	25	(0)	254354
14	23.4	2.1	2.1	chr1	174159974	174160020	(74796402)	+	(TGC)n	Simple_repeat	1	48	(0)	256811
31	3.1	0.0	0.0	chr1	174799759	174799791	(74156631)	+	(GCA)n	Simple_repeat	1	33	(0)	257708
14	33.3	1.4	1.4	chr1	176207201	176207269	(72749153)	+	(CCG)n	Simple_repeat	1	70	(0)	259874
20	16.9	5.7	0.0	chr1	177182107	177182159	(71774263)	+	(CCCTC)n	Simple_repeat	1	56	(0)	261308
994	31.7	5.0	3.0	chr1	178625686	178626111	(70330311)	+	L4_B_Mam	LINE/RTE-X	3859	4293	(648)	263362
287	29.1	3.7	0.0	chr1	180256873	180256975	(68699447)	+	MIRb	SINE/MIR	92	198	(70)	266112
12	17.5	3.1	0.0	chr1	180881855	180881886	(68074536)	+	A-rich	Low_complexity	1	33	(0)	267112
310	32.3	19.1	5.2	chr1	182028926	182029560	(66926862)	+	L2b	LINE/L2	2539	3298	(77)	268744
313	25.3	4.0	3.0	chr1	182604884	182604993	(66351429)	C	MIR	SINE/MIR	(98)	164	61	269730
11	19.1	2.1	6.2	chr1	182615102	182615148	(66341274)	+	(CGGCCG)n	Simple_repeat	1	48	(0)	269753
267	22.6	16.0	0.0	chr1	182615673	182615756	(66340666)	C	MIR	SINE/MIR	(30)	232	133	269754
309	22.2	0.0	0.0	chr1	182615747	182615809	(66340613)	C	MIR	SINE/MIR	(188)	74	12	269754
236	26.7	8.8	5.2	chr1	182615816	182615969	(66340453)	C	L2a	LINE/L2	(41)	3385	3226	269755
233	32.2	8.7	2.5	chr1	183069880	183069997	(65886425)	C	L2c	LINE/L2	(280)	3107	2982	270528
3484	24.8	11.0	4.9	chr1	183093165	183094575	(65861847)	+	L2a	LINE/L2	1889	3425	(1)	270566
2166	13.2	0.7	0.0	chr1	183493576	183493879	(65462543)	C	AluSx	SINE/Alu	(6)	306	1	271226
1468	23.4	7.9	7.2	chr1	183493880	183493963	(65462459)	C	L1MEc	LINE/L1	(3545)	2774	2683	271224
12	22.4	3.9	3.8	chr1	184387016	184387066	(64569356)	+	(CCCT)n	Simple_repeat	1	53	(0)	272567
1892	19.3	6.4	2.3	chr1	184404290	184404677	(64551745)	C	MLT1A1	LTR/ERVL-MaLR	(3)	405	1	272600
927	24.7	17.2	1.3	chr1	184419456	184420037	(64536385)	C	L2a	LINE/L2	(0)	3426	2738	272624
447	28.6	9.9	2.5	chr1	184755473	184755676	(64200746)	C	MIRb	SINE/MIR	(40)	228	8	273161
1048	24.3	10.8	4.3	chr1	184936433	184936896	(64019526)	C	MLT1D	LTR/ERVL-MaLR	(6)	499	2	273457
6336	17.5	4.2	2.3	chr1	193115476	193116605	(55839817)	+	L1MCa	LINE/L1	23	1178	(5330)	284386
16	25.5	0.0	3.6	chr1	193122096	193122150	(55834272)	+	GA-rich	Low_complexity	1	55	(0)	284394
16	18.3	2.1	4.2	chr1	193122142	193122188	(55834234)	+	(GGC)n	Simple_repeat	1	48	(0)	284395
239	36.3	9.5	4.5	chr1	197448495	197448803	(51507619)	+	L2c	LINE/L2	2935	3260	(127)	289950
329	31.0	11.2	5.2	chr1	200221579	200221879	(48734543)	+	L2b	LINE/L2	2818	3135	(240)	293815
13	16.7	4.8	2.3	chr1	200483909	200483950	(48472472)	+	(TCTTGC)n	Simple_repeat	1	44	(0)	294341
421	26.6	1.8	3.5	chr1	200738476	200738588	(48217834)	+	MIRb	SINE/MIR	155	265	(3)	294912
27	20.2	5.2	3.0	chr1	200738767	200738862	(48217560)	+	G-rich	Low_complexity	1	101	(0)	294913
341	28.5	11.1	7.2	chr1	200778876	200779083	(48177339)	+	MLT1M	LTR/ERVL-MaLR	172	388	(284)	294994
398	28.2	0.0	1.6	chr1	200779111	200779250	(48177172)	C	L1ME4a	LINE/L1	(257)	5867	5727	294995
17	16.5	0.0	8.8	chr1	201023734	201023790	(47932632)	+	(CCCGC)n	Simple_repeat	1	57	(0)	295380
329	28.6	3.8	7.2	chr1	201309567	201309732	(47646690)	C	MamRTE1	LINE/RTE-BovB	(1)	3811	3652	295814
810	23.1	3.9	2.5	chr1	201720585	201720788	(47235634)	+	MIR	SINE/MIR	56	262	(0)	296530
398	28.1	5.4	6.5	chr1	201758833	201759095	(47197327)	+	MIR	SINE/MIR	3	262	(0)	296588
13	18.3	2.6	2.5	chr1	201916656	201916694	(47039728)	+	G-rich	Low_complexity	1	40	(0)	296832
12	20.3	6.7	0.0	chr1	201947123	201947167	(47009255)	+	(AGATAG)n	Simple_repeat	1	48	(0)	296897
189	31.2	6.8	5.7	chr1	202113560	202113807	(46842615)	+	L2a	LINE/L2	2972	3222	(165)	297312
285	29.2	2.1	1.4	chr1	203118081	203118190	(45838232)	+	MIR	SINE/MIR	108	215	(53)	299080
604	23.7	3.9	3.4	chr1	203267878	203268056	(45688366)	+	LTR41B	LTR/ERVL	471	650	(108)	299315
13716	13.6	2.9	3.8	chr1	203912742	203913623	(45042799)	+	Tigger2	DNA/TcMar-Tigger	1	883	(1835)	300585
22	23.5	7.4	3.0	chr1	204151969	204152074	(44804348)	+	(CGGCCCG)n	Simple_repeat	1	135	(11)	301083
2264	9.1	0.7	0.3	chr1	204413644	204413939	(44542483)	C	AluSc8	SINE/Alu	(13)	298	2	301497
23	16.8	0.0	8.3	chr1	204494845	204494916	(44461506)	+	(CCTCC)n	Simple_repeat	1	72	(0)	301631
16	9.7	0.0	0.0	chr1	204495395	204495416	(44461006)	+	(A)n	Simple_repeat	1	22	(0)	301632
429	32.6	6.2	6.2	chr1	205109833	205110027	(43846395)	C	L3	LINE/CR1	(56)	4043	3845	302792
197	29.2	15.9	0.9	chr1	205348845	205348951	(43607471)	C	L3b	LINE/CR1	(197)	5035	4910	303264
17	22.6	1.8	3.5	chr1	205450323	205450378	(43506044)	+	(TCCC)n	Simple_repeat	1	57	(0)	303453
1982	14.8	4.3	2.9	chr1	205647367	205647668	(43308754)	C	MLT1A0	LTR/ERVL-MaLR	(37)	328	19	303837
13	8.5	4.0	0.0	chr1	206471277	206471301	(42485121)	+	(GGAGG)n	Simple_repeat	1	26	(0)	305147
616	30.4	2.7	4.0	chr1	206495205	206495430	(42460992)	+	MIRb	SINE/MIR	40	262	(6)	305186
17	13.4	0.0	0.0	chr1	206672990	206673022	(42283400)	+	(ATTATG)n	Simple_repeat	1	33	(0)	305495
25	19.3	0.0	0.0	chr1	211259429	211259481	(37696941)	+	(CCT)n	Simple_repeat	1	53	(0)	312389
15	18.4	2.1	4.2	chr1	211259610	211259656	(37696766)	+	(CGGCAG)n	Simple_repeat	1	48	(0)	312390
14	4.8	0.0	4.2	chr1	211259634	211259657	(37696765)	+	(CGG)n	Simple_repeat	1	24	(0)	312391
1127	29.9	12.8	0.0	chr1	211783754	211784290	(37172132)	C	L2a	LINE/L2	(0)	3426	2798	313369
283	22.6	1.2	2.3	chr1	211829493	211829578	(37126844)	C	UCON89	DNA/hAT?	(25)	217	133	313465
9291	7.9	14.5	0.4	chr1	211889365	211890718	(37065704)	+	LTR12C	LTR/ERV1	3	1579	(0)	313558
22	20.9	0.0	0.0	chr1	212567134	212567174	(36389248)	+	(T)n	Simple_repeat	1	41	(0)	314770
21	7.7	0.0	0.0	chr1	213987549	213987576	(34968846)	+	(A)n	Simple_repeat	1	28	(0)	317037
12	17.6	3.1	0.0	chr1	213989528	213989559	(34966863)	+	GA-rich	Low_complexity	1	33	(0)	317042
622	35.1	1.3	2.4	chr1	214439734	214440110	(34516312)	C	CR1_Mam	LINE/CR1	(612)	1592	1220	317695
434	27.9	0.0	7.3	chr1	214440150	214440300	(34516122)	+	MIR3	SINE/MIR	62	201	(7)	317696
44	10.2	0.0	0.0	chr1	219927639	219927701	(29028721)	+	(A)n	Simple_repeat	1	63	(0)	325338
23	15.5	2.2	0.0	chr1	220300500	220300544	(28655878)	+	(AGC)n	Simple_repeat	1	46	(0)	326003
367	32.8	7.2	6.2	chr1	220745953	220746626	(28209796)	+	L2c	LINE/L2	2499	3214	(161)	326673
22	16.2	5.5	0.0	chr1	220880215	220880269	(28076153)	+	(CAGCAA)n	Simple_repeat	1	58	(0)	326860
14	8.1	3.9	0.0	chr1	221742866	221742891	(27213531)	+	(CGCC)n	Simple_repeat	1	27	(0)	328101
291	31.7	10.1	3.0	chr1	222801780	222801945	(26154477)	+	MamTip2	DNA/hAT-Tip100	123	301	(4)	329703
2391	9.3	0.0	1.6	chr1	222825494	222825804	(26130618)	C	AluSx1	SINE/Alu	(5)	307	2	329750
1784	18.5	0.0	0.7	chr1	222825907	222826203	(26130219)	C	AluJo	SINE/Alu	(17)	295	1	329751
1638	17.3	11.5	0.3	chr1	223001526	223001849	(25954573)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	330032
1084	24.0	10.0	3.3	chr1	223001850	223002071	(25954351)	C	Kanga2_a	DNA/TcMar-Tc2	(339)	549	317	330031
388	32.9	16.2	3.0	chr1	223040289	223040754	(25915668)	C	L2a	LINE/L2	(32)	3394	2867	330082
2309	12.6	0.0	0.0	chr1	223040755	223041064	(25915358)	C	AluSz	SINE/Alu	(2)	310	1	330083
18	0.0	0.0	0.0	chr1	223363361	223363382	(25593040)	+	(TGC)n	Simple_repeat	1	22	(0)	330583
341	27.4	4.0	1.0	chr1	223706619	223706714	(25249708)	+	MIRb	SINE/MIR	116	214	(54)	331073
19	20.6	3.0	4.3	chr1	223712887	223712965	(25243457)	+	(GCGG)n	Simple_repeat	1	77	(0)	331090
413	32.5	10.3	0.5	chr1	223839173	223839364	(25117058)	+	MIRb	SINE/MIR	22	234	(34)	331305
35	2.5	2.4	0.0	chr1	224204729	224204769	(24751653)	+	(CAATATATTC)n	Simple_repeat	1	42	(0)	332037
360	34.2	12.9	1.5	chr1	224317312	224317572	(24638850)	C	L2c	LINE/L2	(116)	3271	2977	332318
195	34.9	0.0	1.5	chr1	224317608	224317674	(24638748)	C	L2c	LINE/L2	(556)	2863	2798	332318
30	6.3	3.9	1.9	chr1	224434205	224434256	(24522166)	+	(GGA)n	Simple_repeat	1	54	(0)	332549
20	8.8	0.0	5.0	chr1	224503038	224503077	(24453345)	+	(GGGA)n	Simple_repeat	1	40	(0)	332678
23	21.6	0.0	0.0	chr1	224616317	224616327	(24340095)	+	(GCAGCG)n	Simple_repeat	1	21	(42)	332883
21	10.0	0.0	0.0	chr1	224616328	224616360	(24340062)	+	(GGC)n	Simple_repeat	1	33	(0)	332884
269	30.2	9.4	0.0	chr1	225423696	225423801	(23532621)	+	L2a	LINE/L2	3287	3403	(23)	333954
18	20.0	1.8	3.6	chr1	225428084	225428138	(23528284)	+	(CGCCT)n	Simple_repeat	1	56	(0)	333958
3239	16.1	5.7	0.2	chr1	225462619	225463184	(23493238)	+	LTR26	LTR/ERV1	5	603	(0)	334009
12	12.6	3.7	0.0	chr1	225463501	225463527	(23492895)	+	G-rich	Low_complexity	1	28	(0)	334010
18	20.3	0.0	0.0	chr1	225534398	225534433	(23421989)	+	(T)n	Simple_repeat	1	36	(0)	334105
2992	17.9	8.9	4.8	chr1	225614359	225614834	(23341588)	C	MER21C	LTR/ERVL	(365)	573	1	334231
726	25.2	14.2	5.2	chr1	225700877	225701240	(23255182)	C	MLT1L	LTR/ERVL-MaLR	(14)	596	195	334410
476	32.4	6.7	2.9	chr1	225710807	225711051	(23245371)	C	L2c	LINE/L2	(0)	3387	3133	334430
254	23.4	10.1	2.7	chr1	225711108	225711217	(23245205)	+	MER5B	DNA/hAT-Charlie	5	123	(55)	334431
567	31.0	12.3	2.9	chr1	225818247	225818555	(23137867)	C	L2b	LINE/L2	(0)	3375	3034	334634
901	25.5	6.0	0.8	chr1	226041351	226041587	(22914835)	+	MIR	SINE/MIR	13	262	(0)	335079
1185	10.7	4.5	0.0	chr1	226100350	226100517	(22855905)	C	AluSg4	SINE/Alu	(1)	309	134	335208
347	10.9	0.0	0.0	chr1	226100518	226100572	(22855850)	+	Alu	SINE/Alu	245	299	(2)	335209
1694	25.1	6.6	6.3	chr1	226107501	226108147	(22848275)	+	L2a	LINE/L2	2298	2946	(473)	335221
1309	15.1	2.1	15.7	chr1	226108908	226109078	(22847344)	C	AluJr	SINE/Alu	(183)	129	10	335231
1124	22.8	16.5	4.3	chr1	226109093	226109510	(22846912)	+	L2a	LINE/L2	2948	3426	(0)	335221
2181	7.8	0.0	1.1	chr1	226123000	226123282	(22833140)	C	AluSx1	SINE/Alu	(22)	290	11	335250
200	27.9	2.4	13.5	chr1	226182626	226182684	(22773738)	+	L2	LINE/L2	2895	2951	(468)	335376
1317	16.8	7.9	1.2	chr1	226401714	226401981	(22554441)	+	L1MC1	LINE/L1	6037	6303	(30)	335827
1566	15.0	5.1	1.1	chr1	226408353	226408632	(22547790)	C	AluJr	SINE/Alu	(20)	292	1	335835
586	27.9	1.3	0.0	chr1	226943704	226943850	(22012572)	C	L1ME1	LINE/L1	(23)	6156	6008	336732
18	5.7	0.0	10.9	chr1	226944088	226944133	(22012289)	+	G-rich	Low_complexity	1	46	(0)	336733
13	21.7	0.0	0.0	chr1	227318187	227318218	(21638204)	+	(GCG)n	Simple_repeat	1	32	(0)	337282
14	12.7	0.0	0.0	chr1	227947529	227947554	(21008868)	+	(ACG)n	Simple_repeat	1	26	(0)	338087
594	26.4	16.2	8.0	chr1	228460443	228461226	(20495196)	C	Charlie2b	DNA/hAT-Charlie	(16)	2766	1907	338745
2188	8.2	0.7	1.0	chr1	228486230	228486535	(20469887)	+	AluSg	SINE/Alu	1	305	(5)	338796
1499	23.2	6.6	8.5	chr1	228501092	228501759	(20454663)	C	MER77B	LTR/ERVL	(6)	694	41	338819
1341	19.2	7.7	1.3	chr1	228501816	228502121	(20454301)	+	MLT1A0	LTR/ERVL-MaLR	3	329	(36)	338820
216	27.4	3.1	0.0	chr1	228783388	228783449	(20172973)	+	MIR	SINE/MIR	20	83	(179)	339186
235	31.2	4.0	2.7	chr1	228970249	228970396	(19986026)	+	L2b	LINE/L2	2936	3085	(290)	339478
2181	15.9	5.1	1.9	chr1	229121933	229122349	(19834073)	+	MSTB1	LTR/ERVL-MaLR	2	432	(0)	339729
28	0.0	12.5	0.0	chr1	229342108	229342155	(19614267)	+	(CCGCGTCCT)n	Simple_repeat	1	54	(0)	340085
15915	14.7	2.0	5.0	chr1	230178587	230179930	(18776492)	C	L1MC1	LINE/L1	(1)	6507	5195	341513
15	9.9	0.0	7.9	chr1	230754112	230754149	(18202273)	+	G-rich	Low_complexity	1	38	(0)	342359
12	17.9	3.1	0.0	chr1	231039984	231040015	(17916407)	+	(CGCCCG)n	Simple_repeat	1	33	(0)	342810
13	13.5	0.0	7.9	chr1	231162081	231162118	(17794304)	+	G-rich	Low_complexity	1	38	(0)	343022
2409	7.4	0.0	1.7	chr1	231340081	231340378	(17616044)	+	AluY	SINE/Alu	1	293	(18)	343325
404	30.4	8.5	0.6	chr1	231340381	231340542	(17615880)	C	MIRc	SINE/MIR	(50)	218	43	343326
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
25099	7.0	0.3	0.9	chr1	231646102	231652225	(17304197)	C	L1HS	LINE/L1	(99)	6229	174	343868
473	25.0	6.8	10.3	chr1	232776593	232776703	(16179719)	C	L1ME4c	LINE/L1	(702)	5422	5346	345413
272	29.1	18.8	1.7	chr1	232776717	232776957	(16179465)	+	MLT1J	LTR/ERVL-MaLR	75	366	(146)	345415
181	36.4	5.7	1.5	chr1	233241942	233242008	(15714414)	C	Tigger19b	DNA/TcMar-Tigger	(329)	221	152	346088
2047	20.0	3.9	1.6	chr1	234505222	234505673	(14450749)	+	MLT1C	LTR/ERVL-MaLR	5	467	(0)	347985
916	11.9	0.8	0.0	chr1	234554703	234554828	(14401594)	+	AluJr4	SINE/Alu	7	133	(179)	348079
17	4.0	0.0	3.6	chr1	234606150	234606177	(14350245)	+	(AAACA)n	Simple_repeat	1	28	(0)	348160
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
390	30.7	6.8	3.5	chr1	234885103	234885301	(14071121)	+	MLT1H	LTR/ERVL-MaLR	107	312	(237)	348604
594	27.6	20.0	2.0	chr1	235411759	235412157	(13544265)	+	L2	LINE/L2	1723	2211	(1208)	349695
13	22.5	3.6	3.5	chr1	235504156	235504218	(13452204)	+	(CGCAGG)n	Simple_repeat	1	63	(0)	349877
2012	20.4	0.4	11.0	chr1	235608350	235608673	(13347749)	C	L1MB7	LINE/L1	(18)	6166	5887	350097
16	3.8	0.0	6.5	chr1	236065203	236065233	(12891189)	+	(AGGGG)n	Simple_repeat	1	31	(0)	350914
5002	14.9	8.1	0.8	chr1	236301050	236301882	(12654540)	+	LTR1D1	LTR/ERV1	1	899	(0)	351343
13	21.9	2.3	2.2	chr1	236395330	236395373	(12561049)	+	(TCCCGGC)n	Simple_repeat	1	45	(0)	351538
15	26.9	0.0	2.1	chr1	236395443	236395497	(12560925)	+	GA-rich	Low_complexity	1	53	(0)	351539
830	11.1	0.0	0.0	chr1	236472534	236472641	(12483781)	C	AluSx3	SINE/Alu	(17)	294	187	351708
535	23.0	8.4	1.9	chr1	236472688	236472842	(12483580)	C	MIRb	SINE/MIR	(17)	251	86	351709
289	36.8	7.8	2.4	chr1	236693496	236693918	(12262504)	+	L2	LINE/L2	2479	2926	(493)	352114
14	14.6	0.0	3.1	chr1	240091763	240091794	(8864628)	+	(GCG)n	Simple_repeat	1	32	(0)	357135
17	21.6	2.1	0.0	chr1	240091879	240091926	(8864496)	+	(AGCCGC)n	Simple_repeat	1	49	(0)	357136
33	12.3	0.0	0.0	chr1	240092724	240092785	(8863637)	+	(GCA)n	Simple_repeat	1	62	(0)	357138
1085	14.9	1.2	0.0	chr1	240653199	240653366	(8303056)	C	MER58B	DNA/hAT-Charlie	(0)	341	172	358021
16	15.3	2.0	6.0	chr1	244048506	244048554	(4907868)	+	GA-rich	Low_complexity	1	50	(0)	363520
1793	16.7	7.6	0.0	chr1	244665526	244665854	(4290568)	+	MLT2D	LTR/ERVL	1	356	(58)	364526
1258	27.2	12.4	2.2	chr1	244665908	244666449	(4289973)	+	L2c	LINE/L2	1187	1791	(1628)	364527
30	0.0	0.0	0.0	chr1	244863396	244863421	(4093001)	+	(AC)n	Simple_repeat	1	26	(0)	364910
17	20.4	2.1	2.1	chr1	244863617	244863663	(4092759)	+	(CCG)n	Simple_repeat	1	48	(0)	364911
14	31.3	0.0	0.0	chr1	244863779	244863829	(4092593)	+	(GCT)n	Simple_repeat	1	51	(0)	364912
24	23.7	4.7	1.1	chr1	244864370	244864458	(4091964)	+	(GGCTGC)n	Simple_repeat	1	92	(0)	364914
13	18.0	7.7	1.8	chr1	244969866	244969917	(3986505)	+	G-rich	Low_complexity	1	56	(0)	365185
684	23.5	4.8	0.0	chr1	248905786	248905964	(50458)	C	MER5A	DNA/hAT-Charlie	(0)	189	2	370978
1408	24.2	6.2	6.6	chr10	6162408	6163053	(127634369)	C	L1MC4	LINE/L1	(796)	7246	6700	379016
723	21.1	8.1	2.5	chr10	6819525	6819723	(126977699)	C	MER76	LTR/ERVL	(104)	587	377	380109
231	34.3	10.3	1.4	chr10	7589908	7590253	(126207169)	+	L2c	LINE/L2	2186	2565	(854)	381268
14	22.8	0.0	4.4	chr10	11165375	11165419	(122632003)	+	(CTC)n	Simple_repeat	1	45	(0)	386566
14	12.5	0.0	0.0	chr10	11165846	11165871	(122631551)	+	(CCCG)n	Simple_repeat	1	26	(0)	386567
724	28.0	20.2	2.0	chr10	11373558	11373743	(122423679)	+	L2a	LINE/L2	2525	2761	(658)	386785
236	23.5	13.0	15.8	chr10	11373793	11374014	(122423408)	+	L2a	LINE/L2	2995	3209	(217)	386785
19	0.0	9.7	0.0	chr10	11611514	11611544	(122185878)	+	(CGG)n	Simple_repeat	1	34	(0)	387153
2098	10.3	6.2	3.5	chr10	12347537	12347674	(121449748)	C	L1PB4	LINE/L1	(227)	5929	5800	388743
14	4.9	0.0	0.0	chr10	12349652	12349672	(121447750)	+	(GCG)n	Simple_repeat	1	21	(0)	388746
375	25.5	8.1	4.3	chr10	12632258	12632495	(121164927)	C	L2a	LINE/L2	(297)	3129	2869	389307
2020	18.4	2.7	5.8	chr10	13079205	13079874	(120717548)	+	HERVIP10FH-int	LTR/ERV1	4	829	(4273)	390064
373	29.7	7.1	14.6	chr10	13349618	13350063	(120447359)	C	L2	LINE/L2	(801)	2618	2209	390597
253	19.7	2.9	4.3	chr10	14648360	14648428	(119148994)	C	UCON25	Unknown	(116)	159	92	392807
711	9.9	0.0	2.2	chr10	14878087	14878177	(118919245)	+	AluJb	SINE/Alu	200	288	(24)	393216
199	26.0	13.5	0.0	chr10	14960106	14960201	(118837221)	C	MIR3	SINE/MIR	(34)	174	64	393370
13	15.5	4.1	5.9	chr10	15097302	15097350	(118700072)	+	(GCGAG)n	Simple_repeat	1	51	(0)	393620
1347	32.3	3.4	0.8	chr10	15856844	15857383	(117940039)	+	L2a	LINE/L2	2650	3205	(221)	394901
18	0.0	0.0	0.0	chr10	17616645	17616664	(116180758)	+	(A)n	Simple_repeat	1	20	(0)	397751
14	10.7	0.0	5.9	chr10	21527274	21527307	(112270115)	+	G-rich	Low_complexity	1	34	(0)	403873
12	36.1	0.0	2.6	chr10	21534011	21534087	(112263335)	+	(CCCGCG)n	Simple_repeat	1	77	(0)	403878
326	27.3	19.4	2.8	chr10	22084390	22084675	(111712747)	C	L2c	LINE/L2	(1389)	2030	1686	404767
12	24.6	3.6	3.5	chr10	22713358	22713413	(111084009)	+	(CCGC)n	Simple_repeat	1	58	(0)	405676
2339	14.7	5.2	0.0	chr10	23121136	23121515	(110675907)	C	MSTA	LTR/ERVL-MaLR	(27)	401	1	406305
13	9.8	9.1	0.0	chr10	24416003	24416035	(109381387)	+	(GCAGGCT)n	Simple_repeat	1	36	(0)	408459
723	30.3	8.2	4.6	chr10	24696603	24697121	(109100301)	+	HERV16-int	LTR/ERVL	988	1526	(3700)	408911
16	3.5	3.0	5.9	chr10	24723960	24723992	(109073430)	+	(CCTCC)n	Simple_repeat	1	34	(0)	408956
15	18.9	2.2	4.3	chr10	26860996	26861041	(106936381)	+	(CCT)n	Simple_repeat	1	47	(0)	412439
1451	7.9	0.0	0.0	chr10	27154563	27154739	(106642683)	C	AluSx1	SINE/Alu	(5)	307	131	412952
2386	6.6	0.0	6.2	chr10	27156003	27156322	(106641100)	C	AluY	SINE/Alu	(10)	301	2	412955
851	15.3	0.7	3.5	chr10	27241586	27241729	(106555693)	+	FLAM_C	SINE/Alu	1	140	(3)	413146
31	5.9	0.0	0.0	chr10	27243093	27243128	(106554294)	+	(CA)n	Simple_repeat	1	36	(0)	413148
18	0.0	0.0	0.0	chr10	27714010	27714029	(106083393)	+	(A)n	Simple_repeat	1	20	(0)	413888
4208	11.3	4.8	0.2	chr10	28385954	28386556	(105410866)	+	MER41B	LTR/ERV1	2	633	(1)	414975
462	21.9	9.5	1.7	chr10	29646017	29646132	(104151290)	+	L2a	LINE/L2	3299	3424	(2)	417192
11	24.1	0.0	0.0	chr10	30434680	30434713	(103362709)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	418706
18	17.8	2.2	2.1	chr10	31319443	31319488	(102477934)	+	(CCG)n	Simple_repeat	1	47	(0)	420165
16	26.5	1.6	3.2	chr10	31319540	31319601	(102477821)	+	(CCG)n	Simple_repeat	1	63	(0)	420165
243	17.2	24.4	7.0	chr10	31929554	31929653	(101867769)	+	MIRc	SINE/MIR	10	132	(136)	420991
13	4.3	3.9	3.7	chr10	32347086	32347114	(101450308)	+	(CCGCT)n	Simple_repeat	1	29	(0)	421822
457	33.0	12.2	2.9	chr10	33660424	33661013	(100136409)	+	L2a	LINE/L2	2732	3398	(28)	423589
199	26.6	16.9	2.7	chr10	34809452	34809598	(98987824)	C	L2c	LINE/L2	(193)	3194	3023	425316
24	15.5	2.0	0.0	chr10	34814822	34814871	(98982551)	+	(CCCGCC)n	Simple_repeat	1	51	(0)	425323
2497	14.7	2.4	1.2	chr10	34920955	34921375	(98876047)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	7	425584
2200	11.6	0.3	3.5	chr10	35412570	35412888	(98384534)	+	AluSx	SINE/Alu	2	310	(2)	426553
1553	21.5	2.1	6.0	chr10	35822287	35822722	(97974700)	+	MLT1F	LTR/ERVL-MaLR	130	548	(0)	427156
646	24.1	15.0	4.8	chr10	42926763	42927106	(90870316)	+	LTR16A1	LTR/ERVL	1	409	(47)	432765
11	19.9	5.3	5.0	chr10	43076490	43076546	(90720876)	+	(CCCGCCT)n	Simple_repeat	1	60	(0)	432926
305	20.0	4.5	4.5	chr10	43397593	43397681	(90399741)	+	L1MC5	LINE/L1	7444	7532	(1772)	433411
1132	17.3	3.0	0.7	chr10	43418047	43418377	(90379045)	+	MER74C	LTR/ERVL	13	430	(128)	433460
1697	12.2	5.8	1.4	chr10	43420660	43420938	(90376484)	C	AluJo	SINE/Alu	(20)	292	1	433468
1473	24.9	14.8	2.7	chr10	44865190	44865960	(88931462)	+	L1MEc	LINE/L1	48	927	(5473)	435328
14	4.0	7.7	0.0	chr10	50420434	50420459	(83376963)	+	(TCA)n	Simple_repeat	1	28	(0)	443325
16	0.0	0.0	0.0	chr10	52652994	52653011	(81144411)	+	(A)n	Simple_repeat	1	18	(0)	446580
3814	16.6	5.2	0.3	chr10	53664561	53665235	(80132187)	C	MER50	LTR/ERV1	(24)	710	1	447886
27728	2.5	0.0	0.1	chr10	55601876	55607910	(78189512)	+	L1PA3	LINE/L1	124	6154	(1)	450394
284	29.7	2.6	0.0	chr10	59908015	59908088	(73889334)	+	UCON2	DNA?	400	475	(110)	456272
26	0.0	0.0	0.0	chr10	60141562	60141586	(73655836)	+	(T)n	Simple_repeat	1	25	(0)	456642
15	22.2	7.7	0.0	chr10	60944059	60944110	(72853312)	+	(GC)n	Simple_repeat	1	56	(0)	457856
239	28.4	20.0	1.1	chr10	61855869	61856116	(71941306)	C	L2a	LINE/L2	(258)	3168	2846	459163
410	33.9	10.2	10.9	chr10	61923188	61923535	(71873887)	+	L2b	LINE/L2	3030	3374	(1)	459285
203	20.0	19.5	2.1	chr10	61923588	61923684	(71873738)	+	L2b	LINE/L2	3231	3348	(27)	459286
13	26.3	0.0	2.1	chr10	62051038	62051084	(71746338)	+	(TCTTTT)n	Simple_repeat	1	47	(0)	459478
16	4.5	0.0	0.0	chr10	63466140	63466162	(70331260)	+	(GGC)n	Simple_repeat	1	23	(0)	461841
1999	14.1	0.9	1.8	chr10	65570387	65570726	(68226696)	+	MER61A	LTR/ERV1	1	337	(4)	464914
185	36.9	11.1	4.3	chr10	67606538	67606721	(66190701)	C	MIR1_Amn	SINE/MIR	(30)	200	3	467659
226	31.0	7.2	2.7	chr10	68204918	68205063	(65592359)	+	L2b	LINE/L2	3007	3159	(216)	468712
2285	10.5	0.0	0.7	chr10	68412988	68413293	(65384129)	C	AluSq2	SINE/Alu	(4)	309	6	469147
17	24.9	1.9	0.0	chr10	68560198	68560249	(65237173)	+	G-rich	Low_complexity	1	53	(0)	469546
303	24.7	0.9	16.4	chr10	68827043	68827142	(64970280)	C	MIR3	SINE/MIR	(174)	94	3	470234
18	29.1	4.1	1.3	chr10	69406720	69406792	(64390630)	+	(TC)n	Simple_repeat	1	76	(0)	471532
439	28.9	13.6	1.9	chr10	69636516	69636723	(64160699)	C	MIR	SINE/MIR	(14)	248	13	471969
489	23.7	7.8	0.0	chr10	69758388	69758505	(64038917)	+	MIRb	SINE/MIR	54	181	(87)	472205
288	36.1	6.8	3.1	chr10	69812852	69813145	(63984277)	+	L2a	LINE/L2	3081	3425	(1)	472307
224	34.0	12.6	0.9	chr10	70169947	70170157	(63627265)	+	MIRc	SINE/MIR	26	264	(4)	472878
226	24.6	14.9	2.6	chr10	70267424	70267538	(63529884)	C	MIRb	SINE/MIR	(69)	199	67	473074
401	28.2	4.4	8.9	chr10	70685505	70685695	(63111727)	C	MIR3	SINE/MIR	(26)	182	1	473952
13	24.9	1.0	3.1	chr10	71319183	71319233	(62478189)	+	G-rich	Low_complexity	1	49	(0)	474994
12	16.5	5.9	0.0	chr10	71319274	71319307	(62478115)	+	(GCG)n	Simple_repeat	1	36	(0)	474995
15	24.8	7.0	0.0	chr10	71319440	71319517	(62477905)	+	(TC)n	Simple_repeat	1	83	(0)	474996
912	18.1	8.3	1.8	chr10	72030761	72030985	(61766437)	C	MER67A	LTR/ERV1	(196)	347	107	476392
180	29.0	11.5	1.0	chr10	72031081	72031181	(61766241)	+	MIRc	SINE/MIR	84	196	(72)	476393
12	28.0	1.6	4.8	chr10	72096181	72096242	(61701180)	+	GA-rich	Low_complexity	1	63	(0)	476519
431	17.2	3.9	2.9	chr10	72320176	72320277	(61477145)	+	MIRb	SINE/MIR	97	199	(69)	477043
1042	16.2	0.0	0.0	chr10	72320291	72320450	(61476972)	+	AluJb	SINE/Alu	139	298	(14)	477044
246	29.6	8.8	2.3	chr10	72320812	72320939	(61476483)	+	MIRc	SINE/MIR	85	221	(47)	477045
1608	9.8	3.1	4.9	chr10	72364016	72364281	(61433141)	C	AluSc8	SINE/Alu	(16)	295	35	477118
1934	12.9	1.0	0.7	chr10	72800190	72800494	(60996928)	+	Tigger4	DNA/TcMar-Tigger	2424	2729	(2)	478064
19	11.7	0.0	0.0	chr10	73095523	73095550	(60701872)	+	(A)n	Simple_repeat	1	28	(0)	478599
16	19.1	4.0	1.9	chr10	73246748	73246797	(60550625)	+	(GTTCTCT)n	Simple_repeat	1	52	(0)	478920
2258	12.5	0.6	0.6	chr10	75393577	75393888	(58403534)	+	AluSz	SINE/Alu	1	312	(0)	483038
588	20.2	9.0	2.1	chr10	75393889	75393901	(58403521)	+	L1MC5	LINE/L1	9293	9304	(0)	483037
231	31.1	10.5	0.8	chr10	75393945	75394064	(58403358)	+	MER5B	DNA/hAT-Charlie	46	178	(0)	483039
384	26.1	1.3	10.5	chr10	75394065	75394155	(58403267)	+	MIR	SINE/MIR	65	142	(120)	483040
14	21.1	2.6	0.0	chr10	75400233	75400270	(58397152)	+	(CCG)n	Simple_repeat	1	39	(0)	483050
20	24.1	3.6	0.0	chr10	75402683	75402737	(58394685)	+	GA-rich	Low_complexity	1	57	(0)	483056
13	13.2	0.0	0.0	chr10	75403419	75403443	(58393979)	+	(GAGG)n	Simple_repeat	1	25	(0)	483057
217	18.8	11.1	0.0	chr10	78043580	78043627	(55753795)	C	L2b	LINE/L2	(19)	3356	3303	487051
13	19.0	0.0	5.0	chr10	78303451	78303490	(55493932)	+	(CCGC)n	Simple_repeat	1	40	(0)	487572
205	28.2	12.2	0.5	chr10	78584325	78584429	(55212993)	C	L2c	LINE/L2	(266)	3121	3000	488080
26	24.4	5.0	1.9	chr10	79069020	79069120	(54728302)	+	(AGCG)n	Simple_repeat	1	106	(0)	489000
17	24.4	0.0	2.0	chr10	79070492	79070541	(54726881)	+	G-rich	Low_complexity	1	50	(0)	489003
25	22.8	1.3	2.6	chr10	79070825	79070899	(54726523)	+	(CCTC)n	Simple_repeat	1	76	(0)	489004
79	4.9	0.0	0.0	chr10	79114457	79114541	(54682881)	+	(GT)n	Simple_repeat	1	85	(0)	489081
14	11.2	3.5	0.0	chr10	79114544	79114578	(54682844)	+	(GGAG)n	Simple_repeat	1	36	(0)	489082
549	19.5	12.1	0.6	chr10	79116875	79117049	(54680373)	C	MLT1H2	LTR/ERVL-MaLR	(6)	483	286	489088
480	25.4	3.6	4.1	chr10	79117140	79117330	(54680092)	C	MLT1H2	LTR/ERVL-MaLR	(315)	234	1	489088
268	27.8	6.4	3.5	chr10	79152025	79152158	(54645264)	+	MIR3	SINE/MIR	27	158	(50)	489150
14	19.5	5.4	3.4	chr10	79157620	79157675	(54639747)	+	(CTGGCC)n	Simple_repeat	1	59	(0)	489161
22	20.9	4.8	5.5	chr10	79242947	79243050	(54554372)	+	G-rich	Low_complexity	1	109	(0)	489320
876	24.9	7.1	0.3	chr10	79336763	79337052	(54460370)	+	ERV3-16A3_LTR	LTR/ERVL	103	413	(9)	489445
16	28.8	0.0	0.0	chr10	79445059	79445109	(54352313)	+	(GCCAG)n	Simple_repeat	1	51	(0)	489638
20	9.4	3.9	5.7	chr10	79445563	79445613	(54351809)	+	(CCGCTG)n	Simple_repeat	1	53	(0)	489639
291	22.7	8.4	1.8	chr10	79938940	79939073	(53858349)	+	MIR3	SINE/MIR	2	151	(79)	490363
13	22.6	4.2	2.0	chr10	84194610	84194657	(49602765)	+	(CCG)n	Simple_repeat	1	50	(0)	496470
3622	15.7	8.4	3.1	chr10	84567801	84568125	(49229297)	+	LTR48	LTR/ERV1	1	349	(438)	497050
12	12.2	3.7	0.0	chr10	86668410	86668436	(47128986)	+	(GGCA)n	Simple_repeat	1	28	(0)	499941
438	23.0	7.3	0.8	chr10	86682015	86682141	(47115281)	C	MIRc	SINE/MIR	(123)	145	10	499955
254	28.1	10.1	1.1	chr10	86770496	86770585	(47026837)	+	LTR78B	LTR/ERV1	770	868	(428)	500114
494	28.5	15.5	2.9	chr10	86770628	86770869	(47026553)	+	LTR78B	LTR/ERV1	997	1274	(22)	500114
209	30.1	13.3	2.0	chr10	87659195	87659340	(46138082)	+	MIRb	SINE/MIR	14	178	(90)	501618
420	30.9	12.1	2.7	chr10	87764486	87764598	(46032824)	+	L1ME4b	LINE/L1	4913	5026	(1120)	501781
986	24.6	12.1	9.2	chr10	87764606	87765179	(46032243)	+	L1MC5	LINE/L1	8606	9198	(106)	501795
6271	12.9	9.1	0.9	chr10	87845092	87846218	(45951204)	C	Tigger3b	DNA/TcMar-Tigger	(1)	1230	2	501903
1757	12.3	16.6	1.9	chr10	87921990	87922353	(45875069)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	502003
186	23.7	0.0	0.0	chr10	89252186	89252223	(44545199)	+	MIRb	SINE/MIR	203	240	(28)	504103
557	27.9	4.3	0.9	chr10	91380994	91381217	(42416205)	+	MamRep605	LTR?	425	656	(193)	507236
291	34.2	10.6	5.2	chr10	91414423	91414860	(42382562)	C	L2c	LINE/L2	(8)	3379	2916	507291
29	6.1	0.0	0.0	chr10	91909576	91909609	(41887813)	+	(TC)n	Simple_repeat	1	34	(0)	508070
13	19.4	8.3	0.0	chr10	92700190	92700237	(41097185)	+	(CTTTCC)n	Simple_repeat	1	52	(0)	509687
1560	11.5	0.4	10.0	chr10	93495867	93496145	(40301277)	+	AluJr	SINE/Alu	25	276	(36)	511237
15	19.8	0.0	4.5	chr10	93994009	93994052	(39803370)	+	(GCG)n	Simple_repeat	1	44	(0)	512167
26369	4.9	0.9	0.9	chr10	94159623	94165478	(39631944)	C	L1PA4	LINE/L1	(3)	6152	297	512477
756	10.2	0.0	0.0	chr10	94165464	94165561	(39631861)	C	L1PA4	LINE/L1	(6057)	98	1	512477
16	26.4	2.8	2.7	chr10	95291011	95291081	(38506341)	+	G-rich	Low_complexity	1	73	(0)	514030
477	25.1	8.2	4.0	chr10	96044847	96045020	(37752402)	+	MIR	SINE/MIR	60	241	(21)	515319
11	17.2	7.7	0.0	chr10	96720027	96720065	(37077357)	+	(TCGCCTC)n	Simple_repeat	1	42	(0)	516502
469	26.9	7.2	3.3	chr10	97291984	97292163	(36505259)	C	MIRb	SINE/MIR	(10)	252	68	517638
15	31.5	3.4	4.9	chr10	97713625	97713743	(36083679)	+	GA-rich	Low_complexity	1	123	(0)	518570
350	20.0	14.8	0.9	chr10	97715447	97715562	(36081860)	C	MER103C	DNA/hAT-Charlie	(54)	243	109	518572
400	33.6	15.0	2.4	chr10	97898175	97898814	(35898608)	C	L2b	LINE/L2	(5)	3370	2630	518980
15	11.6	0.0	0.0	chr10	98259306	98259333	(35538089)	+	(GGAGG)n	Simple_repeat	1	28	(0)	519606
12	20.1	7.5	1.8	chr10	99329299	99329351	(34468071)	+	(CTCCGG)n	Simple_repeat	1	57	(0)	521275
18	14.0	0.0	0.0	chr10	99329390	99329421	(34468001)	+	(GGC)n	Simple_repeat	1	32	(0)	521276
11	27.7	0.0	2.2	chr10	99329484	99329528	(34467894)	+	(CCCCGGC)n	Simple_repeat	1	45	(0)	521277
240	31.2	9.0	4.7	chr10	99431457	99431604	(34365818)	+	L2c	LINE/L2	3047	3201	(186)	521450
191	19.6	9.7	5.1	chr10	100009443	100009501	(33787921)	+	MIR3	SINE/MIR	131	192	(16)	522510
14	13.8	0.0	5.6	chr10	100744304	100744339	(33053083)	+	G-rich	Low_complexity	1	36	(0)	523904
12	14.9	0.0	10.6	chr10	100744988	100745034	(33052388)	+	GA-rich	Low_complexity	1	47	(0)	523905
15	24.3	1.8	3.5	chr10	101131171	101131227	(32666195)	+	(CCCTC)n	Simple_repeat	1	58	(0)	524524
62	20.7	5.4	0.6	chr10	101229292	101229457	(32567965)	+	(TC)n	Simple_repeat	1	175	(0)	524695
13	21.1	4.5	5.7	chr10	101230283	101230349	(32567073)	+	(CCGGCT)n	Simple_repeat	1	70	(0)	524696
17	25.6	3.3	0.0	chr10	101292609	101292668	(32504754)	+	(GCACGC)n	Simple_repeat	1	62	(0)	524824
24	25.3	4.6	2.6	chr10	101293156	101293263	(32504159)	+	(CTCTCC)n	Simple_repeat	1	113	(0)	524828
19	4.0	0.0	0.0	chr10	101694598	101694623	(32102799)	+	(CCT)n	Simple_repeat	1	26	(0)	525477
1946	11.9	3.2	1.3	chr10	101815991	101816293	(31981129)	+	AluSx3	SINE/Alu	2	310	(1)	525731
1087	14.9	2.3	1.7	chr10	102056615	102056789	(31740633)	C	AluJb	SINE/Alu	(0)	312	137	526189
2401	9.0	0.3	0.3	chr10	102056797	102057107	(31740315)	C	AluSx	SINE/Alu	(1)	311	1	526190
17	11.3	0.0	0.0	chr10	102115079	102115107	(31682315)	+	(AGGG)n	Simple_repeat	1	29	(0)	526322
22	25.9	4.3	0.0	chr10	102117843	102117911	(31679511)	+	(TG)n	Simple_repeat	1	72	(0)	526327
19	14.1	2.6	0.0	chr10	102118013	102118051	(31679371)	+	(CAGG)n	Simple_repeat	1	40	(0)	526328
13	31.4	1.4	2.8	chr10	102120569	102120638	(31676784)	+	G-rich	Low_complexity	1	71	(0)	526332
241	20.4	0.0	0.0	chr10	102420649	102420697	(31376725)	C	L2a	LINE/L2	(0)	3426	3378	526881
33	8.9	0.0	2.0	chr10	102432858	102432908	(31364514)	+	(TC)n	Simple_repeat	1	51	(0)	526899
12	15.3	3.5	0.0	chr10	102642298	102642326	(31155096)	+	(CGCCC)n	Simple_repeat	1	30	(0)	527306
20	6.7	0.0	3.0	chr10	102714290	102714322	(31083100)	+	(CCT)n	Simple_repeat	1	33	(0)	527438
36	20.6	3.5	3.4	chr10	102743955	102744068	(31053354)	+	GA-rich	Low_complexity	1	118	(0)	527500
453	26.6	7.2	1.9	chr10	103542675	103542831	(30254591)	+	MIRb	SINE/MIR	76	241	(27)	529172
392	25.9	22.6	0.0	chr10	103703897	103704054	(30093368)	+	MIR	SINE/MIR	44	247	(15)	529465
226	28.0	20.2	1.3	chr10	103761859	103762010	(30035412)	+	MIRb	SINE/MIR	63	250	(18)	529589
600	26.4	2.3	4.0	chr10	103839410	103839583	(29957839)	C	MIR	SINE/MIR	(12)	250	80	529745
308	27.4	7.9	2.5	chr10	103918661	103918780	(29878642)	+	MamRep4096	DNA/hAT-Tip100	3	129	(297)	529891
221	23.4	18.1	3.3	chr10	104340181	104340330	(29457092)	+	L2c	LINE/L2	2911	3087	(300)	530553
34	11.4	0.0	0.0	chr10	110005975	110006032	(23791390)	+	(GCT)n	Simple_repeat	1	58	(0)	538774
14	30.7	0.0	0.0	chr10	110008207	110008254	(23789168)	+	(GGC)n	Simple_repeat	1	48	(0)	538775
1296	17.4	20.3	0.0	chr10	110068325	110068599	(23728823)	+	MER2	DNA/TcMar-Tigger	1	345	(0)	538867
361	32.2	10.6	8.4	chr10	110431602	110432352	(23365070)	C	L2b	LINE/L2	(25)	3350	2570	539497
13	0.0	5.0	0.0	chr10	110648984	110649003	(23148419)	+	(GAA)n	Simple_repeat	1	21	(0)	539929
2411	12.4	8.0	2.7	chr10	110806285	110806647	(22990775)	C	MSTA	LTR/ERVL-MaLR	(33)	395	1	540187
506	24.8	10.3	0.6	chr10	110874057	110874276	(22923146)	+	MIRb	SINE/MIR	18	268	(0)	540305
402	29.9	5.0	1.5	chr10	112447638	112447773	(21349649)	+	MIRb	SINE/MIR	6	146	(122)	542694
16	25.6	3.4	1.6	chr10	112951983	112952041	(20845381)	+	(CTCT)n	Simple_repeat	1	61	(0)	543552
240	27.9	7.5	1.1	chr10	113047915	113048001	(20749421)	C	MER103C	DNA/hAT-Charlie	(1)	296	204	543707
426	23.4	1.8	0.9	chr10	113047926	113048037	(20749385)	+	MER103C	DNA/hAT-Charlie	29	141	(156)	543708
381	31.8	7.6	7.9	chr10	113299993	113300320	(20497102)	C	L2b	LINE/L2	(25)	3350	3024	544084
310	29.2	0.0	2.5	chr10	113680752	113680871	(20116551)	+	MIR	SINE/MIR	43	158	(50)	544718
12	17.2	4.9	2.3	chr10	114043807	114043847	(19753575)	+	G-rich	Low_complexity	1	43	(0)	545302
34	10.4	4.8	0.0	chr10	114043898	114043960	(19753462)	+	(GCAGCG)n	Simple_repeat	1	66	(0)	545303
30	23.6	0.0	1.3	chr10	114043961	114043974	(19753448)	+	(GCG)n	Simple_repeat	1	77	(0)	545304
1600	25.1	6.5	0.5	chr10	114515588	114516019	(19281403)	+	MLT1C	LTR/ERVL-MaLR	1	460	(7)	546054
13	21.5	4.7	0.0	chr10	115092788	115092830	(18704592)	+	GA-rich	Low_complexity	1	45	(0)	547067
14	4.3	0.0	7.1	chr10	115093817	115093844	(18703578)	+	(CGG)n	Simple_repeat	1	28	(0)	547070
489	26.9	14.0	0.5	chr10	116053789	116054001	(17743421)	+	MIRb	SINE/MIR	32	267	(1)	548234
528	25.9	15.1	0.0	chr10	117364578	117364751	(16432671)	C	L2a	LINE/L2	(286)	3140	2936	550320
405	20.6	12.3	1.8	chr10	117449186	117449294	(16348128)	+	MIR3	SINE/MIR	41	162	(46)	550490
31	3.9	5.3	3.3	chr10	117541603	117541659	(16255763)	+	(ATA)n	Simple_repeat	1	60	(0)	550653
42	6.0	0.0	0.0	chr10	117542914	117542966	(16254456)	+	(A)n	Simple_repeat	1	53	(0)	550655
25	12.3	4.1	6.6	chr10	117543061	117543152	(16254270)	+	(CTTTC)n	Simple_repeat	1	89	(0)	550656
2587	13.2	5.0	0.2	chr10	118914335	118914736	(14882686)	C	MSTA	LTR/ERVL-MaLR	(0)	428	7	552831
16	24.1	1.8	3.5	chr10	119029967	119030023	(14767399)	+	(GCG)n	Simple_repeat	1	58	(0)	553071
16	23.3	0.0	0.0	chr10	119030023	119030062	(14767360)	+	(CTC)n	Simple_repeat	1	40	(0)	553072
21	12.1	0.0	0.0	chr10	119030110	119030145	(14767277)	+	(CGA)n	Simple_repeat	1	36	(0)	553073
322	25.0	16.1	0.0	chr10	119166723	119166826	(14630596)	+	L2b	LINE/L2	3084	3207	(168)	553372
475	28.6	14.5	7.0	chr10	119166926	119167543	(14629879)	+	L2a	LINE/L2	2745	3424	(2)	553373
12	19.3	4.7	2.2	chr10	119207493	119207535	(14589887)	+	(GCGCCT)n	Simple_repeat	1	45	(0)	553463
22	24.7	2.8	5.5	chr10	119207598	119207639	(14589783)	+	GA-rich	Low_complexity	1	76	(33)	553464
19	21.6	0.0	0.0	chr10	119207640	119207687	(14589735)	+	G-rich	Low_complexity	1	48	(0)	553465
1409	18.3	19.8	3.2	chr10	119241732	119242204	(14555218)	C	MER34A	LTR/ERV1	(0)	571	1	553538
1438	16.0	13.7	3.4	chr10	119786558	119786819	(14010603)	C	AluJo	SINE/Alu	(19)	293	1	554602
15	4.1	4.0	0.0	chr10	120979824	120979848	(12817574)	+	(CCCGC)n	Simple_repeat	1	26	(0)	556460
2933	19.9	4.5	4.3	chr10	121324899	121325469	(12471953)	+	L1MC3	LINE/L1	7109	7677	(108)	556972
370	26.2	2.4	5.8	chr10	124614235	124614398	(9183024)	C	MIR3	SINE/MIR	(8)	200	47	562227
488	25.9	14.9	2.1	chr10	124671107	124671531	(9125891)	+	LTR50	LTR/ERVL	216	795	(0)	562286
12	4.3	8.3	0.0	chr10	125161036	125161059	(8636363)	+	(TCGC)n	Simple_repeat	1	26	(0)	563053
1042	30.7	4.7	0.8	chr10	125584987	125585338	(8212084)	C	LTR16D1	LTR/ERVL	(0)	675	310	563732
280	23.9	12.4	4.9	chr10	125633499	125633661	(8163761)	C	L1ME4c	LINE/L1	(39)	791	615	563809
382	26.4	14.0	0.7	chr10	126222346	126222494	(7574928)	+	MIRb	SINE/MIR	75	246	(22)	564575
15	18.7	0.0	8.6	chr10	128324328	128324385	(5473037)	+	(CCTCTGA)n	Simple_repeat	1	58	(0)	567302
35	22.0	5.2	4.3	chr10	132307987	132308140	(1489282)	+	G-rich	Low_complexity	1	162	(0)	571500
226	26.1	9.5	4.3	chr11	749559	749698	(134336924)	C	Charlie4z	DNA/hAT-Charlie	(4)	163	16	573887
475	23.8	12.2	1.9	chr11	762435	762588	(134324034)	C	L1ME1	LINE/L1	(455)	5723	5552	573907
2527	5.6	0.0	0.3	chr11	857401	857702	(134228920)	C	AluY	SINE/Alu	(10)	301	1	574026
17	9.1	5.7	0.0	chr11	2138179	2138213	(132948409)	+	(CCGGCC)n	Simple_repeat	1	37	(0)	575475
19	36.4	2.2	0.0	chr11	2138516	2138606	(132948016)	+	GA-rich	Low_complexity	1	93	(0)	575476
14	23.9	0.0	7.9	chr11	3165324	3165386	(131921236)	+	GA-rich	Low_complexity	1	63	(0)	576656
358	37.5	3.3	3.3	chr11	3169332	3169571	(131917051)	C	MIRb	SINE/MIR	(14)	254	15	576663
2017	8.6	10.0	0.0	chr11	3643267	3643546	(131443076)	+	AluSq4	SINE/Alu	1	311	(0)	577376
429	31.9	4.2	3.6	chr11	6612778	6612969	(128473653)	C	L2c	LINE/L2	(12)	3375	3183	581579
449	34.3	4.8	0.5	chr11	6612979	6613200	(128473422)	C	MIRb	SINE/MIR	(10)	252	14	581580
13	18.1	0.0	3.0	chr11	6647350	6647382	(128439240)	+	GA-rich	Low_complexity	1	33	(0)	581604
563	31.5	8.8	7.7	chr11	8728574	8728900	(126357722)	+	L2c	LINE/L2	3056	3386	(1)	584390
640	27.6	6.0	2.7	chr11	9528619	9528867	(125557755)	C	MIRc	SINE/MIR	(18)	250	2	586015
839	22.0	8.6	10.2	chr11	9748224	9748577	(125338045)	C	LTR41	LTR/ERVL	(18)	750	340	586487
668	18.2	12.9	2.8	chr11	9748602	9748782	(125337840)	C	LTR41	LTR/ERVL	(499)	202	1	586487
945	28.6	10.4	4.7	chr11	11876445	11876958	(123209664)	C	MLT1H1	LTR/ERVL-MaLR	(8)	547	1	589888
2551	20.5	2.5	0.9	chr11	12065920	12066461	(123020161)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	8	590174
413	28.1	13.2	2.3	chr11	12799546	12799760	(122286862)	C	MIRc	SINE/MIR	(24)	244	3	591347
23521	10.1	1.9	4.6	chr11	13990408	13993017	(121093605)	C	L1PA7	LINE/L1	(3831)	2630	1	593146
2460	27.9	11.0	0.8	chr11	14309342	14310567	(120776055)	C	L2a	LINE/L2	(3)	3423	2052	593654
13	30.3	4.0	1.3	chr11	16607821	16607894	(118478728)	+	(CAGG)n	Simple_repeat	1	77	(0)	597238
16	21.4	0.0	5.6	chr11	16925889	16925942	(118160680)	+	G-rich	Low_complexity	1	54	(0)	597709
453	31.0	13.9	2.0	chr11	17015243	17015538	(118071084)	+	L2a	LINE/L2	3083	3419	(7)	597891
359	28.0	2.7	1.8	chr11	17429024	17429132	(117657490)	C	MIRb	SINE/MIR	(8)	260	151	598724
420	33.4	12.4	4.8	chr11	17723447	17724083	(117362539)	C	L2c	LINE/L2	(5)	3382	2686	599208
335	34.2	5.1	5.0	chr11	17768182	17768484	(117318138)	C	L2b	LINE/L2	(208)	3167	2856	599289
1275	24.8	13.8	3.1	chr11	20249333	20249945	(114836677)	+	Tigger15a	DNA/TcMar-Tigger	11	699	(16)	603591
20	3.9	0.0	0.0	chr11	22194097	22194123	(112892499)	+	(GCT)n	Simple_repeat	1	27	(0)	606582
236	32.4	0.7	8.1	chr11	27202075	27202222	(107884400)	+	AmnSINE1	SINE/5S-Deu-L2	224	360	(215)	613572
17	0.0	0.0	0.0	chr11	30488860	30488878	(104597744)	+	(AC)n	Simple_repeat	1	19	(0)	618544
43	2.3	2.2	0.0	chr11	30584342	30584386	(104502236)	+	(AC)n	Simple_repeat	1	46	(0)	618700
11	17.5	0.0	5.6	chr11	30584705	30584740	(104501882)	+	(CCCGAG)n	Simple_repeat	1	36	(0)	618701
19	0.0	3.3	3.2	chr11	33257658	33257687	(101828935)	+	(AGC)n	Simple_repeat	1	31	(0)	623168
320	32.2	9.0	2.8	chr11	35791573	35791910	(99294712)	+	L2c	LINE/L2	2965	3383	(4)	627322
38	0.0	0.0	0.0	chr11	36165945	36165979	(98920643)	+	(CCTC)n	Simple_repeat	1	35	(0)	627976
27	15.6	0.0	4.8	chr11	36165980	36166042	(98920580)	+	(TCCT)n	Simple_repeat	1	63	(0)	627977
1029	26.9	11.1	3.1	chr11	36500006	36500736	(98585886)	C	L2a	LINE/L2	(1)	3425	2623	628534
15	19.9	3.5	5.1	chr11	43942623	43942679	(91143943)	+	(GGC)n	Simple_repeat	1	59	(0)	639240
12	21.9	3.9	3.8	chr11	43943176	43943226	(91143396)	+	(GCA)n	Simple_repeat	1	53	(0)	639241
13	17.9	2.4	4.7	chr11	45665021	45665062	(89421560)	+	(CGC)n	Simple_repeat	1	43	(0)	642546
14	30.9	1.5	1.5	chr11	45665098	45665162	(89421460)	+	(CCGCGC)n	Simple_repeat	1	66	(0)	642547
466	38.7	4.9	4.3	chr11	45845919	45846264	(89240358)	C	L2b	LINE/L2	(14)	3361	3014	642907
466	28.6	6.6	1.2	chr11	45847863	45848040	(89238582)	C	MIRc	SINE/MIR	(33)	235	60	642910
26	8.9	0.0	0.0	chr11	46120123	46120158	(88966464)	+	(AC)n	Simple_repeat	1	36	(0)	643307
15	16.0	2.9	0.0	chr11	46120543	46120577	(88966045)	+	G-rich	Low_complexity	1	36	(0)	643308
28	24.9	5.9	0.9	chr11	46120810	46120911	(88965711)	+	GA-rich	Low_complexity	1	108	(0)	643310
19	10.4	0.0	0.0	chr11	46120986	46121016	(88965606)	+	(GAG)n	Simple_repeat	1	31	(0)	643311
21	8.9	2.8	0.0	chr11	46121048	46121083	(88965539)	+	(GCT)n	Simple_repeat	1	37	(0)	643312
13	10.4	4.5	11.6	chr11	46122043	46122108	(88964514)	+	(CCGGCAG)n	Simple_repeat	1	69	(0)	643321
14	10.4	3.0	2.9	chr11	46388026	46388058	(88698564)	+	(TCCTCT)n	Simple_repeat	1	34	(0)	643871
13	20.9	0.0	4.8	chr11	47269595	47269636	(87816986)	+	(GCGCC)n	Simple_repeat	1	42	(0)	645590
1736	18.2	6.9	6.2	chr11	49339379	49339764	(85746858)	+	MLT1A1	LTR/ERVL-MaLR	3	391	(17)	648885
15	28.1	0.0	0.0	chr11	57324343	57324389	(77762233)	+	GA-rich	Low_complexity	1	47	(0)	653463
20	9.1	5.3	2.5	chr11	57761887	57761924	(77324698)	+	GA-rich	Low_complexity	1	40	(0)	654424
799	14.2	1.6	0.0	chr11	59549189	59549308	(75537314)	C	AluJo	SINE/Alu	(190)	122	1	656942
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
328	30.9	6.0	0.0	chr11	60843379	60843472	(74243150)	C	MIRc	SINE/MIR	(56)	212	113	658980
266	30.4	9.4	7.3	chr11	61361149	61361272	(73725350)	C	MIR3	SINE/MIR	(52)	156	30	660001
326	31.0	3.1	13.2	chr11	61767272	61767520	(73319102)	C	MIRb	SINE/MIR	(6)	262	40	660814
12	24.4	0.0	0.0	chr11	62553215	62553248	(72533374)	+	GA-rich	Low_complexity	1	34	(0)	662297
2375	9.6	0.0	0.0	chr11	62640552	62640853	(72445769)	+	AluY	SINE/Alu	1	302	(9)	662454
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
1808	12.8	0.0	5.4	chr11	62857427	62857723	(72228899)	+	AluJb	SINE/Alu	30	310	(2)	662966
790	13.5	0.8	4.8	chr11	62862373	62862498	(72224124)	+	AluJr	SINE/Alu	5	125	(187)	662978
194	25.0	3.7	0.0	chr11	63938108	63938159	(71148463)	C	MER5B	DNA/hAT-Charlie	(34)	144	91	664692
15	23.4	1.8	5.2	chr11	63938999	63939055	(71147567)	+	(GCC)n	Simple_repeat	1	58	(0)	664694
336	30.5	1.0	0.0	chr11	63962039	63962133	(71124489)	C	MIR1_Amn	SINE/MIR	(62)	168	73	664736
311	30.2	3.6	5.9	chr11	64284961	64285124	(70801498)	+	MIRb	SINE/MIR	100	268	(0)	665322
431	31.0	7.0	2.0	chr11	64688952	64689169	(70397453)	+	MIRc	SINE/MIR	22	249	(19)	666045
1354	18.2	2.7	1.0	chr11	64917999	64918287	(70168335)	+	MER58B	DNA/hAT-Charlie	48	341	(0)	666433
1820	12.1	10.0	0.4	chr11	64918359	64918630	(70167992)	C	AluSx	SINE/Alu	(11)	301	1	666434
280	23.8	20.6	3.4	chr11	65133717	65133886	(69952736)	C	MIRc	SINE/MIR	(70)	198	2	666903
181	34.9	0.0	0.0	chr11	65150706	65150771	(69935851)	C	MIRc	SINE/MIR	(130)	138	73	666943
29	21.7	1.1	5.3	chr11	65181833	65181926	(69904696)	+	GA-rich	Low_complexity	1	95	(0)	667023
513	28.2	14.3	0.6	chr11	65382621	65383056	(69703566)	+	L2b	LINE/L2	2847	3374	(1)	667450
18	0.0	3.9	0.0	chr11	65421803	65421828	(69664794)	+	(AAAT)n	Simple_repeat	1	27	(0)	667511
13	20.8	2.1	4.1	chr11	65540193	65540240	(69546382)	+	(CGGCCC)n	Simple_repeat	1	49	(0)	667739
12	15.7	2.6	5.0	chr11	65888566	65888604	(69198018)	+	G-rich	Low_complexity	1	40	(0)	668355
321	32.7	6.7	2.9	chr11	65892042	65892189	(69194433)	C	MIRc	SINE/MIR	(77)	191	34	668361
3559	23.4	9.0	9.9	chr11	66151311	66151950	(68934672)	+	L1M4a2	LINE/L1	319	1342	(1314)	668933
205	27.3	2.5	10.5	chr11	66330236	66330321	(68756301)	C	L2b	LINE/L2	(1)	3374	3296	669259
1896	8.1	0.0	13.2	chr11	66372449	66372781	(68713841)	C	AluSx	SINE/Alu	(23)	289	1	669345
233	26.9	8.1	6.6	chr11	66372782	66372811	(68713811)	C	ORSL-2b	DNA/hAT-Tip100	(263)	245	216	669344
211	40.0	1.0	0.0	chr11	66372818	66372917	(68713705)	+	L2b	LINE/L2	3224	3324	(51)	669346
320	27.6	5.9	0.8	chr11	66373373	66373500	(68713122)	C	L2c	LINE/L2	(296)	3091	2957	669348
304	31.1	15.2	3.9	chr11	66549075	66549435	(68537187)	+	L2c	LINE/L2	2913	3321	(66)	669764
2351	10.4	0.3	0.0	chr11	66549450	66549757	(68536865)	+	AluSp	SINE/Alu	1	309	(4)	669765
188	32.7	1.8	0.0	chr11	67081891	67081945	(68004677)	+	MIRb	SINE/MIR	35	90	(178)	670897
401	28.0	11.8	6.3	chr11	67436475	67436928	(67649694)	+	L2a	LINE/L2	2873	3380	(7)	671640
2233	11.1	1.7	0.6	chr11	67582666	67583019	(67503603)	+	L1PA11	LINE/L1	5807	6164	(10)	671934
1909	17.1	1.9	6.5	chr11	67731221	67735527	(67351095)	+	SATR2	Satellite	1	4110	(45)	672154
198	23.5	1.6	7.7	chr11	68147332	68147415	(66939207)	+	MIRc	SINE/MIR	43	118	(144)	672872
11	16.9	2.9	2.8	chr11	68839232	68839266	(66247356)	+	(CCGCCG)n	Simple_repeat	1	36	(0)	674056
17	0.0	4.0	0.0	chr11	69700767	69700791	(65385831)	+	(CCAGG)n	Simple_repeat	1	26	(0)	675530
14	31.5	1.6	1.5	chr11	69818160	69818223	(65268399)	+	(GGC)n	Simple_repeat	1	65	(0)	675772
367	32.7	8.4	6.4	chr11	70397654	70398136	(64688486)	+	L2c	LINE/L2	2821	3316	(71)	676802
227	33.8	4.8	4.8	chr11	72670006	72670235	(62416387)	+	L2b	LINE/L2	2923	3152	(223)	680381
185	25.9	10.0	0.0	chr11	72735707	72735760	(62350862)	+	OldhAT1	DNA/hAT-Ac	2536	2595	(253)	680489
337	31.4	8.1	1.2	chr11	72813752	72813912	(62272710)	+	L2c	LINE/L2	2975	3150	(237)	680655
309	30.6	7.6	2.2	chr11	73313734	73313870	(61772752)	+	MIRc	SINE/MIR	46	190	(78)	681609
263	29.0	0.8	10.3	chr11	73315283	73315428	(61771194)	C	MIR3	SINE/MIR	(74)	134	3	681613
1222	31.4	6.6	3.8	chr11	73466622	73467227	(61619395)	+	L1MEd	LINE/L1	5	628	(6458)	681904
250	29.4	1.0	8.1	chr11	73625960	73626031	(61460591)	C	MamTip3	DNA/hAT-Tip100	(1)	499	435	682271
314	26.6	3.1	2.1	chr11	73983760	73983855	(61102767)	C	MIRc	SINE/MIR	(90)	178	82	683166
336	27.1	5.1	2.3	chr11	75313701	75313832	(59772790)	C	MIRb	SINE/MIR	(68)	200	65	685762
34	2.8	0.0	0.0	chr11	75815232	75815268	(59271354)	+	(CAGCGGCGG)n	Simple_repeat	1	37	(0)	686819
1212	25.5	15.2	1.4	chr11	76185416	76185924	(58900698)	+	L2	LINE/L2	2095	2686	(733)	687472
245	30.1	2.0	1.2	chr11	76313604	76313741	(58772881)	C	MIR	SINE/MIR	(42)	188	39	687758
193	33.8	8.4	5.8	chr11	76313716	76313853	(58772769)	+	MIR1_Amn	SINE/MIR	18	159	(71)	687759
326	22.8	9.5	0.1	chr11	76380362	76380479	(58706143)	C	MIR3	SINE/MIR	(45)	163	41	687897
17	0.0	0.0	0.0	chr11	78416780	78416798	(56669824)	+	(A)n	Simple_repeat	1	19	(0)	691987
543	27.2	3.2	7.2	chr11	82900866	82901127	(52185495)	C	MIRb	SINE/MIR	(3)	265	15	699672
12	16.2	7.0	2.2	chr11	82901319	82901361	(52185261)	+	(CCTC)n	Simple_repeat	1	46	(0)	699673
7688	13.2	6.5	1.1	chr11	82921879	82923072	(52163550)	C	L1PB1	LINE/L1	(4227)	2636	1397	699699
14	22.6	3.8	1.8	chr11	92224914	92224966	(42861656)	+	(CCTCT)n	Simple_repeat	1	55	(0)	713864
13	8.1	3.9	0.0	chr11	92226891	92226916	(42859706)	+	(CCTCT)n	Simple_repeat	1	27	(0)	713866
2246	15.8	1.6	0.0	chr11	92329180	92329553	(42757069)	+	MSTB1	LTR/ERVL-MaLR	20	399	(33)	713999
685	23.3	9.0	0.0	chr11	96277947	96278118	(38808504)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	719908
354	34.9	4.0	8.7	chr11	96278409	96278694	(38807928)	C	L2c	LINE/L2	(67)	3320	3049	719909
3863	26.4	3.5	3.0	chr11	100752080	100754040	(34332582)	C	L1PBa	LINE/L1	(5219)	1644	3	725452
14	17.9	0.0	4.8	chr11	103109529	103109570	(31977052)	+	(CTTCCCC)n	Simple_repeat	1	42	(0)	729012
244	15.0	0.0	0.0	chr11	107856936	107856975	(27229647)	C	MIR	SINE/MIR	(133)	129	90	735675
21	6.8	0.0	0.0	chr11	107857022	107857052	(27229570)	+	(AGGA)n	Simple_repeat	1	31	(0)	735676
249	14.6	9.4	0.0	chr11	107857061	107857108	(27229514)	C	MIR1_Amn	SINE/MIR	(94)	136	84	735677
23	11.5	0.0	0.0	chr11	107857109	107857147	(27229475)	+	(AAGG)n	Simple_repeat	1	39	(0)	735678
238	15.4	0.0	0.0	chr11	107857148	107857186	(27229436)	C	MIR	SINE/MIR	(134)	128	90	735679
192	31.4	0.0	0.0	chr11	108008683	108008733	(27077889)	C	L2c	LINE/L2	(7)	3380	3330	736036
12	29.8	1.4	5.3	chr11	108872813	108872886	(26213736)	+	(TTCCCT)n	Simple_repeat	1	75	(0)	737520
2011	17.2	6.5	0.2	chr11	110076257	110076657	(25009965)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	739234
189	12.9	0.0	3.1	chr11	113457811	113457842	(21628780)	+	MamRTE1	LINE/RTE-BovB	3621	3651	(161)	744574
2735	14.7	9.7	0.2	chr11	113665122	113665578	(21421044)	+	LTR10B	LTR/ERV1	1	505	(0)	744952
562	29.9	5.8	10.7	chr11	114044067	114044486	(21042136)	C	L2a	LINE/L2	(1)	3425	3028	745661
16	9.1	0.0	3.9	chr11	114162872	114162897	(20923725)	+	(TC)n	Simple_repeat	1	26	(0)	745822
5713	13.9	2.5	1.3	chr11	115400728	115401326	(19685296)	+	L1MC1	LINE/L1	5375	5976	(357)	747586
365	31.5	4.4	0.0	chr11	115695629	115695758	(19390864)	C	L3b	LINE/CR1	(187)	5045	4910	748097
19	5.7	4.9	4.7	chr11	115695900	115695940	(19390682)	+	(CTCCT)n	Simple_repeat	1	43	(0)	748098
15	11.3	4.1	3.9	chr11	118152814	118152857	(16933765)	+	G-rich	Low_complexity	1	44	(0)	752413
19	26.2	2.1	5.2	chr11	118152876	118152946	(16933676)	+	(GGAGCA)n	Simple_repeat	1	96	(0)	752414
19	18.3	1.9	3.7	chr11	118152901	118152953	(16933669)	+	GA-rich	Low_complexity	1	54	(0)	752415
12	0.0	4.3	4.2	chr11	118152947	118152969	(16933653)	+	(GAGC)n	Simple_repeat	1	24	(0)	752416
13	7.0	6.2	2.9	chr11	118634880	118634911	(16451711)	+	(CTCGCC)n	Simple_repeat	1	34	(0)	753264
13	18.5	2.6	2.5	chr11	118635059	118635097	(16451525)	+	(CCCCCGG)n	Simple_repeat	1	40	(0)	753265
12	21.0	5.9	1.9	chr11	118910433	118910483	(16176139)	+	(CCAGCC)n	Simple_repeat	1	54	(0)	753852
12	18.8	2.6	2.6	chr11	118910595	118910632	(16175990)	+	(CCGCCC)n	Simple_repeat	1	39	(0)	753853
667	31.8	5.5	0.4	chr11	118917308	118917550	(16169072)	C	MIR	SINE/MIR	(4)	258	3	753859
13	22.8	2.4	0.0	chr11	118922150	118922190	(16164432)	+	GA-rich	Low_complexity	1	42	(0)	753864
16	19.4	2.6	8.9	chr11	118925732	118925808	(16160814)	+	(GGC)n	Simple_repeat	1	79	(0)	753868
14	17.6	0.0	6.7	chr11	118929552	118929596	(16157026)	+	(TCCCCC)n	Simple_repeat	1	45	(0)	753878
402	27.7	8.5	9.4	chr11	120068110	120068300	(15018322)	+	MLT1M	LTR/ERVL-MaLR	137	325	(347)	755923
639	27.4	9.0	2.9	chr11	120281734	120281974	(14804648)	+	MIRb	SINE/MIR	6	268	(0)	756282
15	19.1	0.0	2.6	chr11	121466951	121466988	(13619634)	+	A-rich	Low_complexity	1	38	(0)	758163
24	25.7	4.4	3.4	chr11	122882875	122882987	(12203635)	+	(GGC)n	Simple_repeat	1	118	(0)	760399
23	14.5	2.2	0.0	chr11	123195311	123195356	(11891266)	+	(CCCT)n	Simple_repeat	1	47	(0)	761047
802	32.4	9.3	1.4	chr11	124812770	124813117	(10273505)	+	L2	LINE/L2	145	522	(2897)	763596
1721	28.2	8.7	1.8	chr11	124813122	124813775	(10272847)	+	L2	LINE/L2	1170	1872	(1547)	763596
24	10.0	2.2	2.2	chr11	125164817	125164861	(9921761)	+	(GGC)n	Simple_repeat	1	46	(0)	764077
23	26.4	2.9	3.8	chr11	125164926	125165028	(9921594)	+	GA-rich	Low_complexity	1	106	(0)	764078
1142	17.7	2.1	2.9	chr11	126061939	126062182	(9024440)	C	UCON89	DNA/hAT?	(0)	242	1	765433
304	37.6	3.7	1.3	chr11	126113638	126113796	(8972826)	+	MIRb	SINE/MIR	63	225	(43)	765533
15	18.8	5.0	4.8	chr11	126114785	126114844	(8971778)	+	(GGT)n	Simple_repeat	1	63	(0)	765535
15	14.9	3.3	7.9	chr11	126155048	126155108	(8931514)	+	A-rich	Low_complexity	1	63	(0)	765607
642	31.3	7.5	5.9	chr11	128576688	128577145	(6509477)	+	L2c	LINE/L2	2922	3387	(0)	769093
18	18.3	1.6	6.2	chr11	134037391	134037453	(1049169)	+	G-rich	Low_complexity	1	64	(0)	776694
353	24.1	3.5	1.8	chr11	134037532	134037645	(1048977)	C	MIR3	SINE/MIR	(6)	202	87	776695
467	32.9	16.1	2.7	chr12	202196	202489	(133072820)	+	L2b	LINE/L2	3035	3375	(0)	778379
1617	19.4	2.6	5.3	chr12	804971	805363	(132469946)	C	L1MB3	LINE/L1	(364)	5816	5435	779510
820	24.5	13.9	1.9	chr12	963844	964285	(132311024)	C	L2a	LINE/L2	(196)	3230	2734	779791
27	0.0	3.5	0.0	chr12	990356	990384	(132284925)	+	(AAAACAA)n	Simple_repeat	1	30	(0)	779866
357	31.6	4.9	5.7	chr12	2017685	2017932	(131257377)	+	UCON29	DNA/PiggyBac?	100	345	(94)	781569
136	23.5	0.9	0.9	chr12	2194096	2194426	(131080883)	+	(CCT)n	Simple_repeat	1	334	(0)	781841
34	22.3	1.8	4.3	chr12	2959209	2959321	(130315988)	+	(CCCCG)n	Simple_repeat	1	115	(0)	783020
12	4.7	0.0	7.7	chr12	2959345	2959370	(130315939)	+	(CTCC)n	Simple_repeat	1	26	(0)	783021
20	21.7	4.3	5.1	chr12	2959652	2959745	(130315564)	+	(TCGCTCC)n	Simple_repeat	1	98	(0)	783022
17	3.4	6.7	0.0	chr12	2959797	2959826	(130315483)	+	(CTCCG)n	Simple_repeat	1	32	(0)	783023
19	13.8	6.0	1.9	chr12	4269331	4269380	(129005929)	+	(CCG)n	Simple_repeat	1	53	(0)	785266
17	10.0	8.9	2.0	chr12	4275448	4275492	(128999817)	+	(CTC)n	Simple_repeat	1	49	(0)	785271
231	21.6	0.0	0.0	chr12	5518615	5518665	(127756644)	+	MER96B	DNA/hAT-Tip100	186	236	(181)	787144
734	24.6	4.9	0.5	chr12	5518753	5518948	(127756361)	C	LTR33	LTR/ERVL	(298)	217	13	787145
1327	19.9	7.0	9.5	chr12	6263770	6264086	(127011223)	+	MLT2D	LTR/ERVL	115	414	(0)	788337
19	27.0	4.0	3.9	chr12	6342045	6342144	(126933165)	+	GA-rich	Low_complexity	1	104	(0)	788509
2124	12.8	1.6	0.0	chr12	6411237	6411534	(126863775)	C	AluSx1	SINE/Alu	(9)	303	1	788660
267	29.0	16.9	1.2	chr12	6471272	6471435	(126803874)	+	L2	LINE/L2	2440	2634	(785)	788778
12	16.3	2.8	2.7	chr12	6556140	6556175	(126719134)	+	G-rich	Low_complexity	1	37	(0)	788936
15	19.6	5.1	2.0	chr12	6764579	6764639	(126510670)	+	GA-rich	Low_complexity	1	62	(0)	789348
34	19.1	1.3	1.2	chr12	6821734	6821812	(126453497)	+	G-rich	Low_complexity	1	80	(0)	789474
13	16.3	0.0	5.3	chr12	6852108	6852145	(126423164)	+	GA-rich	Low_complexity	1	38	(0)	789515
13	19.6	0.0	0.0	chr12	6852831	6852860	(126422449)	+	G-rich	Low_complexity	1	30	(0)	789516
393	27.4	12.7	0.0	chr12	6890867	6890990	(126384319)	C	MIRb	SINE/MIR	(70)	198	57	789581
619	26.0	0.0	5.2	chr12	6961639	6961792	(126313517)	C	MIR	SINE/MIR	(101)	161	16	789703
12	33.2	0.0	1.7	chr12	8698023	8698080	(124577229)	+	G-rich	Low_complexity	1	58	(0)	792747
3800	20.1	1.2	7.5	chr12	10354138	10354830	(122920479)	C	L1PA10	LINE/L1	(5264)	1089	452	795130
277	17.4	13.1	0.0	chr12	10354837	10354922	(122920387)	+	L1MDb	LINE/L1	1081	1179	(5230)	795132
6126	12.2	8.2	2.6	chr12	10363812	10364665	(122910644)	+	HERV15-int	LTR/ERV1	1	891	(7844)	795150
13	20.0	0.0	2.8	chr12	12611924	12611959	(120663350)	+	GA-rich	Low_complexity	1	36	(0)	798443
15	11.3	6.9	0.0	chr12	12885252	12885280	(120390029)	+	GA-rich	Low_complexity	1	31	(0)	798994
13	20.2	4.3	2.0	chr12	12892048	12892094	(120383215)	+	G-rich	Low_complexity	1	49	(0)	799009
310	28.0	11.9	4.8	chr12	12900339	12900462	(120374847)	C	MIR3	SINE/MIR	(16)	192	59	799029
28	13.3	5.9	1.4	chr12	12900519	12900586	(120374723)	+	(CTTCCT)n	Simple_repeat	1	72	(0)	799030
421	29.6	15.3	4.0	chr12	13258574	13259023	(120016286)	+	LTR89	LTR/ERVL?	366	875	(4)	799600
738	19.0	9.2	0.6	chr12	15706172	15706340	(117568969)	+	MER61A	LTR/ERV1	1	185	(156)	803162
247	24.4	12.8	2.4	chr12	18483921	18484004	(114791305)	C	MLT1H	LTR/ERVL-MaLR	(122)	289	196	806687
25	22.0	1.4	2.7	chr12	19439621	19439692	(113835617)	+	GA-rich	Low_complexity	1	73	(0)	808199
13018	15.1	8.5	3.8	chr12	19481779	19483618	(113791691)	C	L1PB2	LINE/L1	(4878)	1985	2	808267
17	26.9	3.9	2.5	chr12	20368450	20368526	(112906783)	+	(TCCT)n	Simple_repeat	1	80	(0)	809554
2180	11.3	1.6	1.0	chr12	21438130	21438438	(111836871)	C	AluSx1	SINE/Alu	(1)	311	1	810768
253	26.8	0.0	2.7	chr12	21529219	21529291	(111746018)	+	MER5A	DNA/hAT-Charlie	114	184	(5)	810880
63	4.6	0.0	0.0	chr12	23949732	23949798	(109325511)	+	(CT)n	Simple_repeat	1	67	(0)	814234
15	29.1	5.1	0.0	chr12	23949799	23949824	(109325485)	+	(TC)n	Simple_repeat	2	29	(0)	814235
12	19.6	0.0	0.0	chr12	24561719	24561747	(108713562)	+	G-rich	Low_complexity	1	29	(0)	815077
12	19.3	4.7	2.2	chr12	24562109	24562151	(108713158)	+	(CCACCTC)n	Simple_repeat	1	45	(0)	815078
16	11.2	7.1	4.4	chr12	26126103	26126144	(107149165)	+	(CG)n	Simple_repeat	1	45	(0)	817541
328	31.5	2.0	5.9	chr12	27337464	27337615	(105937694)	+	L2c	LINE/L2	2996	3141	(246)	819401
300	15.4	1.5	5.8	chr12	29156718	29156786	(104118523)	+	MER5A	DNA/hAT-Charlie	61	126	(63)	821993
13	16.4	0.0	7.5	chr12	29783878	29783917	(103491392)	+	(CCG)n	Simple_repeat	1	40	(0)	822853
1070	7.2	5.0	2.5	chr12	30134613	30134769	(103140540)	C	AluSx	SINE/Alu	(151)	161	1	823313
300	35.0	6.2	6.9	chr12	30755000	30755260	(102520049)	+	L1M4b	LINE/L1	291	549	(6318)	824130
407	35.0	10.6	8.4	chr12	31117578	31118801	(102156508)	C	L1MDa	LINE/L1	(5629)	1004	402	824695
358	33.8	13.8	0.9	chr12	31361930	31362144	(101913165)	C	MIRb	SINE/MIR	(14)	254	8	825105
12	24.2	4.5	0.0	chr12	31362973	31363016	(101912293)	+	(TGCA)n	Simple_repeat	1	46	(0)	825107
12	20.9	0.0	4.8	chr12	31959362	31959403	(101315906)	+	(CTGGTC)n	Simple_repeat	1	42	(0)	826462
13	25.4	0.0	2.3	chr12	32106755	32106798	(101168511)	+	(CCCCCCG)n	Simple_repeat	1	44	(0)	826842
13	20.6	4.9	4.7	chr12	32106869	32106959	(101168350)	+	(GCGAGCC)n	Simple_repeat	1	91	(0)	826843
1199	2.8	0.0	0.0	chr12	32309780	32309923	(100965386)	C	L1PA5	LINE/L1	(0)	6154	6011	827246
180	20.7	3.3	9.4	chr12	40017179	40017242	(93258067)	C	L2a	LINE/L2	(12)	3414	3355	833182
18466	15.1	1.3	1.2	chr12	40817502	40820062	(92455247)	C	L1PA10	LINE/L1	(3824)	2637	59	834220
15	8.8	0.0	0.0	chr12	41738250	41738273	(91537036)	+	(AAT)n	Simple_repeat	1	24	(0)	835439
255	24.8	11.4	2.7	chr12	42143402	42143513	(91131796)	C	Tigger19b	DNA/TcMar-Tigger	(218)	332	210	836068
13	18.9	0.0	0.0	chr12	42589114	42589143	(90686166)	+	(CCTCG)n	Simple_repeat	1	30	(0)	836900
245	31.6	7.2	3.0	chr12	43653867	43654065	(89621244)	+	L2c	LINE/L2	2558	2765	(654)	838345
907	22.6	2.0	0.5	chr12	43654131	43654330	(89620979)	+	MER63A	DNA/hAT-Blackjack	1	203	(7)	838346
12	16.5	0.0	0.0	chr12	43835773	43835799	(89439510)	+	(CGGCC)n	Simple_repeat	1	27	(0)	838633
21	12.2	0.0	0.0	chr12	44911982	44912017	(88363292)	+	(TAAA)n	Simple_repeat	1	36	(0)	840067
15	27.1	3.1	1.5	chr12	45729941	45730004	(87545305)	+	G-rich	Low_complexity	1	66	(0)	841282
406	29.7	12.0	3.5	chr12	46266442	46266766	(87008543)	+	L2a	LINE/L2	3044	3376	(11)	842051
288	34.1	3.0	4.7	chr12	46385465	46385734	(86889575)	+	L2c	LINE/L2	3146	3373	(2)	842186
30	7.5	5.1	1.6	chr12	47080788	47080846	(86194463)	+	(CT)n	Simple_repeat	1	62	(0)	843081
12	18.3	2.4	2.4	chr12	47080847	47080861	(86194448)	+	(TTCTCTC)n	Simple_repeat	6	19	(0)	843082
21	8.7	3.6	6.9	chr12	47905049	47905104	(85370205)	+	(GCCCC)n	Simple_repeat	1	58	(0)	844402
193	18.2	2.2	2.2	chr12	48002631	48002675	(85272634)	+	MER5B	DNA/hAT-Charlie	121	165	(13)	844524
198	24.0	9.6	6.2	chr12	48029741	48029820	(85245489)	+	OldhAT1	DNA/hAT-Ac	1322	1404	(1444)	844572
14	15.7	5.5	5.2	chr12	48029924	48029978	(85245331)	+	GA-rich	Low_complexity	1	58	(0)	844573
350	24.9	6.0	14.4	chr12	49093058	49093259	(84182050)	+	MIRc	SINE/MIR	9	192	(16)	846378
974	10.6	1.5	0.0	chr12	49093274	49093405	(84181904)	+	AluJo	SINE/Alu	1	134	(178)	846379
1563	27.9	5.8	4.7	chr12	49279706	49280048	(83995261)	+	MLT1L	LTR/ERVL-MaLR	5	354	(256)	846857
13	11.2	0.0	6.1	chr12	49346358	49346390	(83928919)	+	(CTCCCC)n	Simple_repeat	1	33	(0)	847003
14	24.2	5.1	3.7	chr12	49346391	49346434	(83928875)	+	(TCTCCCC)n	Simple_repeat	2	82	(0)	847004
229	20.5	4.3	6.4	chr12	49825623	49825716	(83449593)	C	L3b	LINE/CR1	(153)	5079	4988	847874
1136	22.5	7.9	4.2	chr12	50247163	50247599	(83027710)	+	MLT1G1	LTR/ERVL-MaLR	10	513	(66)	848753
273	30.4	6.1	3.4	chr12	50275618	50275825	(82999484)	C	L2c	LINE/L2	(246)	3141	2928	848825
446	24.5	11.1	3.2	chr12	51270841	51271022	(82004287)	+	MIRb	SINE/MIR	5	202	(6)	850996
419	31.6	8.1	10.8	chr12	51371382	51371515	(81903794)	+	L2	LINE/L2	2942	3073	(346)	851224
20	16.4	0.0	5.7	chr12	51391449	51391501	(81883808)	+	GA-rich	Low_complexity	1	53	(0)	851261
616	24.3	15.4	0.8	chr12	51823269	51823529	(81451780)	C	L4_A_Mam	LINE/RTE-X	(142)	4848	4543	851953
209	30.1	6.7	3.2	chr12	51951201	51951358	(81323951)	C	L2	LINE/L2	(619)	2800	2637	852207
16	21.9	4.7	0.0	chr12	52037162	52037204	(81238105)	+	(GC)n	Simple_repeat	1	45	(0)	852349
405	27.2	9.8	0.0	chr12	52879836	52879982	(80395327)	+	MER91A	DNA/hAT-Tip100	31	193	(3)	853569
12	12.2	3.7	0.0	chr12	52907323	52907349	(80367960)	+	G-rich	Low_complexity	1	28	(0)	853633
241	33.0	5.9	0.0	chr12	53079716	53079827	(80195482)	C	MIRb	SINE/MIR	(15)	253	135	854016
2292	10.7	0.0	0.7	chr12	53250848	53251157	(80024152)	C	AluSx1	SINE/Alu	(4)	308	1	854340
680	28.2	11.0	6.6	chr12	53251158	53251415	(80023894)	C	L2a	LINE/L2	(284)	3142	2831	854337
482	25.0	5.7	0.9	chr12	53251548	53251701	(80023608)	C	MIRc	SINE/MIR	(103)	165	2	854342
12	14.9	8.1	0.0	chr12	53371096	53371132	(79904177)	+	(CTCCT)n	Simple_repeat	1	40	(0)	854609
476	30.6	5.5	5.1	chr12	53440997	53441251	(79834058)	C	L2	LINE/L2	(673)	2746	2491	854769
14	18.2	0.0	0.0	chr12	53452109	53452139	(79823170)	+	(CAG)n	Simple_repeat	1	31	(0)	854795
24	16.6	3.7	0.0	chr12	53499492	53499545	(79775764)	+	(CCT)n	Simple_repeat	1	56	(0)	854871
35	28.4	2.6	3.8	chr12	53965694	53965848	(79309461)	+	A-rich	Low_complexity	1	159	(0)	855717
17	18.4	0.0	0.0	chr12	53973817	53973853	(79301456)	+	(GGCGGA)n	Simple_repeat	1	37	(0)	855721
17	12.9	4.3	4.2	chr12	54002022	54002067	(79273242)	+	GA-rich	Low_complexity	1	48	(0)	855742
17	22.0	2.3	0.0	chr12	54032808	54032851	(79242458)	+	(TCCC)n	Simple_repeat	1	45	(0)	855768
16	8.3	0.0	0.0	chr12	54037581	54037606	(79237703)	+	(AAAT)n	Simple_repeat	1	26	(0)	855772
13	8.8	0.0	3.9	chr12	54040373	54040398	(79234911)	+	(CCTC)n	Simple_repeat	1	26	(0)	855773
18	11.9	3.9	5.7	chr12	54053685	54053735	(79221574)	+	(ACC)n	Simple_repeat	1	53	(0)	855784
17	16.0	0.0	7.0	chr12	54082554	54082566	(79192743)	+	G-rich	Low_complexity	1	12	(0)	855838
587	20.1	15.0	0.0	chr12	54148014	54148172	(79127137)	C	MIRb	SINE/MIR	(46)	222	36	855941
20	13.0	0.0	0.0	chr12	54419093	54419127	(78856182)	+	(GCA)n	Simple_repeat	1	35	(0)	856408
17	29.1	0.0	1.7	chr12	54419128	54419146	(78856163)	+	(GGCGGC)n	Simple_repeat	5	58	(0)	856409
25	24.2	1.2	3.6	chr12	54549560	54549642	(78725667)	+	(CGG)n	Simple_repeat	1	84	(0)	856639
12	15.8	2.6	5.0	chr12	54555806	54555844	(78719465)	+	(CTCCCTT)n	Simple_repeat	1	40	(0)	856645
12	25.8	5.5	0.0	chr12	55681762	55681816	(77593493)	+	(TCCTGC)n	Simple_repeat	1	58	(0)	858068
13	10.0	9.1	0.0	chr12	55930939	55930971	(77344338)	+	(GTAT)n	Simple_repeat	1	36	(0)	858557
19	27.9	2.5	2.4	chr12	56080060	56080082	(77195227)	+	(CTCC)n	Simple_repeat	1	32	(50)	858883
18	8.7	0.0	0.0	chr12	56080083	56080107	(77195202)	+	(CT)n	Simple_repeat	1	25	(0)	858884
19	27.9	2.5	2.4	chr12	56080108	56080141	(77195168)	+	(CTCC)n	Simple_repeat	33	82	(0)	858883
377	33.1	31.3	3.0	chr12	56140663	56141015	(77134294)	C	L2a	LINE/L2	(566)	2853	2397	858958
15	11.5	0.0	3.2	chr12	56221859	56221889	(77053420)	+	(GGGAA)n	Simple_repeat	1	31	(0)	859117
15	0.0	0.0	4.3	chr12	56266850	56266872	(77008437)	+	(CCTT)n	Simple_repeat	1	23	(0)	859192
187	29.8	5.0	5.0	chr12	56291617	56291715	(76983594)	C	L3	LINE/CR1	(650)	3449	3351	859242
1665	13.2	6.7	2.8	chr12	56689295	56689581	(76585728)	+	AluSx	SINE/Alu	1	299	(13)	860043
27	0.0	0.0	0.0	chr12	56751967	56751992	(76523317)	+	(T)n	Simple_repeat	1	26	(0)	860184
1021	29.0	8.1	0.5	chr12	57196363	57196831	(76078478)	C	L2a	LINE/L2	(762)	2657	2041	860844
14	14.9	2.4	4.8	chr12	57222343	57222383	(76052926)	+	(CCTGCC)n	Simple_repeat	1	42	(0)	860870
15	24.6	0.0	0.0	chr12	57431143	57431185	(75844124)	+	(CGCACG)n	Simple_repeat	1	43	(0)	861303
12	11.9	2.3	8.9	chr12	57520866	57520909	(75754400)	+	G-rich	Low_complexity	1	45	(0)	861460
11	34.6	2.9	0.0	chr12	57547085	57547153	(75728156)	+	G-rich	Low_complexity	1	71	(0)	861491
13	12.5	0.0	0.0	chr12	57633134	57633159	(75642150)	+	(CGCAG)n	Simple_repeat	1	26	(0)	861598
440	20.9	2.6	3.5	chr12	57865070	57865183	(75410126)	C	L2a	LINE/L2	(2)	3424	3312	861950
15	20.4	0.0	2.4	chr12	58920321	58920361	(74354948)	+	(CGCTCG)n	Simple_repeat	1	41	(0)	863390
386	22.5	0.0	2.9	chr12	62466227	62466331	(70808978)	C	L2a	LINE/L2	(486)	2933	2832	867970
408	32.3	1.5	0.0	chr12	62860906	62861035	(70414274)	C	MIRc	SINE/MIR	(21)	247	116	868603
273	32.5	12.8	2.8	chr12	62861087	62861304	(70414005)	+	MIRb	SINE/MIR	2	244	(24)	868604
894	26.2	10.9	12.9	chr12	63065983	63066555	(70208754)	+	MLT1G	LTR/ERVL-MaLR	32	591	(0)	868917
21	17.9	1.8	3.6	chr12	63844633	63844687	(69430622)	+	(TCC)n	Simple_repeat	1	56	(0)	870033
2317	8.8	1.3	0.7	chr12	64408112	64408407	(68866902)	C	AluSz	SINE/Alu	(14)	298	1	871085
367	25.9	9.5	2.5	chr12	64451139	64451273	(68824036)	C	MIRb	SINE/MIR	(109)	159	9	871145
1041	18.9	0.0	0.0	chr12	64634148	64634316	(68640993)	C	HSMAR2	DNA/TcMar-Mariner	(801)	501	333	871520
732	15.5	6.5	0.0	chr12	64634347	64634462	(68640847)	C	AluJo	SINE/Alu	(187)	125	2	871521
1031	9.4	3.2	0.0	chr12	64634464	64634612	(68640697)	C	HSMAR2	DNA/TcMar-Mariner	(964)	338	185	871520
1677	16.9	7.7	2.2	chr12	64656810	64657007	(68618302)	+	L1MB3	LINE/L1	5807	6023	(160)	871567
21	16.0	0.0	0.0	chr12	64781684	64781718	(68493591)	+	(T)n	Simple_repeat	1	35	(0)	871799
17	12.0	2.6	2.6	chr12	64824593	64824630	(68450679)	+	(CGCT)n	Simple_repeat	1	39	(0)	871866
16	13.6	2.2	6.4	chr12	65121355	65121400	(68153909)	+	GA-rich	Low_complexity	1	47	(0)	872296
29	3.2	0.0	0.0	chr12	65278805	65278836	(67996473)	+	(CTCTGC)n	Simple_repeat	1	32	(0)	872575
1312	30.5	0.3	3.6	chr12	65300649	65301036	(67974273)	C	MLT1I	LTR/ERVL-MaLR	(35)	376	2	872613
36	2.9	0.0	0.0	chr12	65533360	65533394	(67741915)	+	(CT)n	Simple_repeat	1	35	(0)	872929
19	17.9	0.0	0.0	chr12	65629952	65629990	(67645319)	+	(ACAC)n	Simple_repeat	1	39	(0)	873075
576	25.3	7.7	10.5	chr12	65630010	65630332	(67644977)	C	L2a	LINE/L2	(338)	3081	2769	873073
67	0.0	1.6	0.0	chr12	65824709	65824769	(67450540)	+	(TC)n	Simple_repeat	1	62	(0)	873413
1469	25.1	1.0	1.2	chr12	66066225	66066631	(67208678)	+	AmnSINE1	SINE/5S-Deu-L2	5	410	(165)	873753
629	28.4	6.0	2.0	chr12	66584741	66584995	(66690314)	+	L2	LINE/L2	1345	1610	(1809)	874585
13	19.5	0.0	2.7	chr12	66585031	66585067	(66690242)	+	(TTTTA)n	Simple_repeat	1	37	(0)	874586
212	38.0	7.1	6.1	chr12	67280614	67280893	(65994416)	C	Tigger19b	DNA/TcMar-Tigger	(85)	465	183	875670
745	14.5	7.5	0.0	chr12	67280959	67281082	(65994227)	+	AluSx	SINE/Alu	1	134	(178)	875671
23623	11.9	0.9	2.8	chr12	68244918	68247161	(65028148)	C	MER83A-int	LTR/ERV1	(2122)	2163	12	877065
619	21.0	2.7	7.0	chr12	68406546	68406705	(64868604)	C	MLT1L	LTR/ERVL-MaLR	(73)	537	320	877312
13	12.8	2.6	5.1	chr12	70242939	70242976	(63032333)	+	(GGAGTGA)n	Simple_repeat	1	39	(0)	880614
27	6.1	0.0	0.0	chr12	70242991	70243025	(63032284)	+	(AACACA)n	Simple_repeat	1	35	(0)	880615
337	35.6	3.2	4.9	chr12	71475365	71475714	(61799595)	+	L2c	LINE/L2	2813	3152	(235)	882354
37	8.1	0.0	0.0	chr12	76031137	76031188	(57244121)	+	(TGC)n	Simple_repeat	1	52	(0)	888509
17	16.9	2.0	3.9	chr12	76084621	76084670	(57190639)	+	(GCGGCA)n	Simple_repeat	1	51	(0)	888581
1264	12.5	0.6	0.0	chr12	76880744	76880919	(56394390)	+	AluSx	SINE/Alu	134	310	(2)	889999
12	19.5	7.1	3.3	chr12	77324876	77324931	(55950378)	+	(CGCGCT)n	Simple_repeat	1	60	(0)	890694
16	12.1	11.1	0.0	chr12	77324940	77324984	(55950325)	+	(GGC)n	Simple_repeat	1	50	(0)	890695
13	20.8	0.0	0.0	chr12	79934521	79934553	(53340756)	+	(CCCT)n	Simple_repeat	1	33	(0)	894280
1323	29.6	8.9	0.7	chr12	80778023	80778485	(52496824)	+	MLT1H	LTR/ERVL-MaLR	12	516	(33)	895466
237	34.7	9.8	1.7	chr12	80933376	80933609	(52341700)	+	L2c	LINE/L2	3038	3276	(111)	895713
812	28.7	17.1	2.5	chr12	80933594	80934032	(52341277)	+	L2a	LINE/L2	2911	3426	(0)	895714
27	21.2	1.5	0.0	chr12	81759340	81759404	(51515905)	+	(CTC)n	Simple_repeat	1	66	(0)	896826
561	28.6	13.5	0.9	chr12	82359291	82359625	(50915684)	C	L2	LINE/L2	(357)	3062	2679	897654
15	15.2	2.0	7.7	chr12	85280157	85280207	(47995102)	+	(TCCC)n	Simple_repeat	1	52	(0)	901404
15	29.4	1.6	1.5	chr12	85280565	85280628	(47994681)	+	(GGAAGGT)n	Simple_repeat	1	65	(0)	901405
2267	17.4	3.6	0.2	chr12	88150041	88150448	(45124861)	C	MSTA	LTR/ERVL-MaLR	(3)	425	3	905139
15	24.7	0.0	2.2	chr12	89352704	89352748	(43922561)	+	GA-rich	Low_complexity	1	45	(0)	906881
307	30.6	6.6	3.4	chr12	89510476	89510681	(43764628)	C	L1MEc	LINE/L1	(6101)	299	87	907139
950	25.9	12.4	4.0	chr12	89544709	89545134	(43730175)	C	LTR33	LTR/ERVL	(19)	496	30	907211
354	28.9	10.2	4.1	chr12	89663616	89663882	(43611427)	+	L2	LINE/L2	1902	2186	(1233)	907401
15	27.7	0.0	4.5	chr12	93570274	93570339	(39704970)	+	G-rich	Low_complexity	1	66	(0)	913736
192	23.1	4.4	3.0	chr12	94616489	94616555	(38658754)	C	L2c	LINE/L2	(0)	3426	3338	915510
14	6.8	9.7	0.0	chr12	94650569	94650599	(38624710)	+	(CCG)n	Simple_repeat	1	34	(0)	915567
348	21.7	1.2	1.2	chr12	94710987	94711070	(38564239)	+	MLT1K	LTR/ERVL-MaLR	358	441	(154)	915686
347	22.8	2.3	15.3	chr12	94711187	94711336	(38563973)	+	MLT1K	LTR/ERVL-MaLR	459	588	(7)	915686
2605	13.6	3.7	1.7	chr12	95428465	95428884	(37846425)	C	MSTB1	LTR/ERVL-MaLR	(2)	430	2	917215
204	28.4	5.0	8.7	chr12	95943038	95943141	(37332168)	+	MIRb	SINE/MIR	71	170	(98)	918160
602	33.5	5.7	2.9	chr12	96315635	96315941	(36959368)	+	L1MEd	LINE/L1	69	384	(6702)	918841
28158	1.3	0.2	0.2	chr12	96315943	96321971	(36953338)	+	L1PA2	LINE/L1	124	6154	(1)	918842
1010	26.1	19.8	3.8	chr12	98425847	98426320	(34848989)	C	LTR105_Mam	LTR/ERVL	(44)	556	6	922182
23	13.8	0.0	0.0	chr12	98457029	98457068	(34818241)	+	(CAG)n	Simple_repeat	1	40	(0)	922247
20	22.1	0.0	4.8	chr12	99984569	99984631	(33290678)	+	GA-rich	Low_complexity	1	63	(0)	924662
14	4.1	3.7	3.6	chr12	100574695	100574729	(32700580)	+	(CAAA)n	Simple_repeat	1	35	(0)	925853
14	20.8	8.8	1.4	chr12	101699689	101699756	(31575553)	+	(TATTACA)n	Simple_repeat	1	74	(0)	927784
278	28.9	17.7	1.9	chr12	101699815	101700022	(31575287)	+	MIRc	SINE/MIR	2	249	(19)	927785
565	31.6	7.4	4.2	chr12	101810559	101810961	(31464348)	C	L2a	LINE/L2	(12)	3414	2998	927980
351	19.8	5.1	12.7	chr12	101810962	101811111	(31464198)	+	MLT1H	LTR/ERVL-MaLR	172	309	(240)	927981
15	14.8	1.9	7.5	chr12	101877701	101877752	(31397557)	+	(GCGCCCG)n	Simple_repeat	1	53	(0)	928161
962	24.1	4.6	9.2	chr12	101881502	101881913	(31393396)	+	L2a	LINE/L2	2935	3326	(100)	928171
34	24.0	3.4	5.2	chr12	103841045	103841158	(29434151)	+	(CCG)n	Simple_repeat	1	161	(0)	931388
16	22.2	3.9	1.9	chr12	103841159	103841209	(29434100)	+	(CTG)n	Simple_repeat	1	53	(0)	931389
42	20.4	2.2	5.0	chr12	104138230	104138383	(29136926)	+	(GCCCC)n	Simple_repeat	1	149	(0)	931921
1452	22.3	14.7	2.6	chr12	104142640	104143105	(29132204)	+	L2a	LINE/L2	2893	3425	(1)	931926
195	26.1	15.6	3.0	chr12	104219410	104219476	(29055833)	C	L2b	LINE/L2	(23)	3352	3276	932110
15	17.8	3.6	5.2	chr12	104669194	104669249	(28606060)	+	(CCTCC)n	Simple_repeat	1	58	(0)	933058
6577	15.4	2.7	1.5	chr12	104923385	104923789	(28351520)	+	L1M1	LINE/L1	4458	4884	(2678)	933503
1895	26.1	13.3	1.8	chr12	104923792	104924463	(28350846)	+	L1ME3B	LINE/L1	4951	5691	(551)	933508
12	8.9	2.2	10.9	chr12	104957749	104957793	(28317516)	+	(CACCAT)n	Simple_repeat	1	46	(0)	933575
193	26.2	13.7	0.9	chr12	106358283	106358390	(26916919)	C	MIR1_Amn	SINE/MIR	(84)	146	23	936113
554	18.3	3.4	0.0	chr12	106956654	106956768	(26318541)	C	MamRep1879	DNA/hAT-Tip100?	(90)	126	8	937154
257	10.8	0.0	0.0	chr12	107645698	107645734	(25629575)	+	L2c	LINE/L2	3337	3373	(14)	938610
259	32.3	6.6	0.0	chr12	108631982	108632080	(24643229)	+	MIRb	SINE/MIR	86	191	(77)	940712
4579	21.8	8.2	6.1	chr12	108672063	108672599	(24602710)	+	HAL1M8	LINE/L1	1547	2074	(917)	940770
22	18.9	4.3	2.7	chr12	109291552	109291621	(23983688)	+	(CTCTCC)n	Simple_repeat	1	73	(0)	942211
346	29.2	5.8	2.5	chr12	109306236	109306423	(23968886)	C	MIR	SINE/MIR	(49)	219	23	942254
452	24.6	12.3	2.1	chr12	109604893	109605037	(23670272)	C	MIRb	SINE/MIR	(94)	174	13	942840
1345	20.5	10.8	3.6	chr12	109610499	109610918	(23664391)	C	MLT1C	LTR/ERVL-MaLR	(13)	454	1	942862
26	6.3	0.0	0.0	chr12	109714197	109714230	(23561079)	+	(CCG)n	Simple_repeat	1	34	(0)	943153
12	5.6	0.0	0.0	chr12	109996273	109996291	(23279018)	+	(GGC)n	Simple_repeat	1	19	(0)	943774
267	28.4	14.1	0.8	chr12	110273343	110273459	(23001850)	C	L2c	LINE/L2	(228)	3159	3025	944399
13	24.4	0.0	4.3	chr12	110281353	110281399	(22993910)	+	(CGCCC)n	Simple_repeat	1	47	(0)	944414
357	24.4	8.4	6.3	chr12	110314580	110314754	(22960555)	+	MIR	SINE/MIR	84	262	(0)	944484
267	23.3	0.0	0.0	chr12	110501338	110501397	(22773912)	C	Charlie4z	DNA/hAT-Charlie	(63)	104	45	944881
209	29.9	11.8	0.0	chr12	110885606	110885739	(22389570)	+	L2b	LINE/L2	3036	3187	(188)	945803
1305	17.4	9.7	6.8	chr12	111534855	111535135	(21740174)	+	AluJo	SINE/Alu	3	292	(20)	947278
4826	14.3	6.6	5.7	chr12	112010307	112011300	(21264009)	C	MER52C	LTR/ERV1	(0)	1278	276	948296
233	28.2	3.7	7.2	chr12	112084276	112084386	(21190923)	C	L2a	LINE/L2	(13)	3413	3307	948430
513	18.5	3.8	0.1	chr12	112404628	112404737	(20870572)	+	FLAM_C	SINE/Alu	1	212	(90)	949130
228	23.3	1.4	6.4	chr12	113152924	113153001	(20122308)	C	Charlie8	DNA/hAT-Charlie	(3)	2425	2352	950919
37	20.0	1.2	0.0	chr12	114684052	114684132	(18591177)	+	GA-rich	Low_complexity	1	82	(0)	954267
531	28.8	13.3	4.0	chr12	116127706	116128030	(17147279)	+	L2	LINE/L2	2722	3081	(338)	957394
4565	20.7	8.3	4.1	chr12	116170901	116171207	(17104102)	C	Charlie1a	DNA/hAT-Charlie	(1155)	300	1	957460
568	25.3	11.2	7.1	chr12	116346616	116346938	(16928371)	+	L1ME4c	LINE/L1	123	460	(370)	957799
418	19.0	7.9	6.5	chr12	116346971	116347094	(16928215)	+	MER58C	DNA/hAT-Charlie	5	130	(85)	957800
763	24.5	15.5	7.0	chr12	116383579	116383732	(16891577)	+	MLT1C	LTR/ERVL-MaLR	7	170	(297)	957894
996	16.1	1.3	0.0	chr12	116389848	116389996	(16885313)	+	AluSx3	SINE/Alu	136	286	(25)	957912
332	24.8	6.7	10.1	chr12	116509037	116509175	(16766134)	+	MIRb	SINE/MIR	55	188	(80)	958245
24	6.5	0.0	0.0	chr12	116658843	116658874	(16616435)	+	(CT)n	Simple_repeat	1	32	(0)	958631
263	28.8	4.1	2.5	chr12	116958650	116958770	(16316539)	C	L2c	LINE/L2	(178)	3209	3087	959343
352	30.1	7.5	4.8	chr12	117048046	117048254	(16227055)	C	MIRb	SINE/MIR	(14)	254	40	959447
276	25.6	9.4	1.0	chr12	117685786	117685905	(15589404)	+	MIRc	SINE/MIR	2	146	(84)	960851
33	16.5	1.1	6.5	chr12	117968829	117968920	(15306389)	+	(TGC)n	Simple_repeat	1	93	(0)	961512
13	18.8	0.0	5.0	chr12	117968993	117969032	(15306277)	+	G-rich	Low_complexity	1	40	(0)	961513
14	25.6	1.7	3.3	chr12	118104038	118104096	(15171213)	+	(GCCGG)n	Simple_repeat	1	60	(0)	961850
2291	9.0	0.0	1.3	chr12	118131760	118132070	(15143239)	C	AluSx1	SINE/Alu	(5)	307	1	961933
343	17.5	1.7	0.0	chr12	118135834	118135890	(15139419)	C	LSU-rRNA_Hsa	rRNA	(2344)	2691	2634	961947
474	25.6	11.3	1.1	chr12	119940787	119940960	(13334349)	+	Chap1_Mam	DNA/hAT-Charlie	43	236	(106)	965870
15	27.2	1.6	3.2	chr12	120116778	120116838	(13158471)	+	(CCT)n	Simple_repeat	1	62	(0)	966262
12	17.3	0.0	5.6	chr12	120235974	120236009	(13039300)	+	(CCAG)n	Simple_repeat	1	36	(0)	966491
232	28.6	10.5	5.5	chr12	120241935	120242097	(13033212)	C	L2	LINE/L2	(787)	2632	2461	966505
2162	7.9	2.4	0.0	chr12	120584161	120584440	(12690869)	C	AluSx1	SINE/Alu	(24)	288	2	967438
2378	5.3	0.0	3.7	chr12	120637242	120637563	(12637746)	C	AluYm1	SINE/Alu	(1)	310	1	967569
1095	25.5	10.3	6.5	chr12	120637564	120637804	(12637505)	+	L2a	LINE/L2	2930	3186	(240)	967568
335	32.5	10.0	8.2	chr12	121203332	121203576	(12071733)	C	MLT1O	LTR/ERVL-MaLR	(15)	527	278	968842
540	28.0	8.7	0.5	chr12	121203588	121203777	(12071532)	C	MLT1O	LTR/ERVL-MaLR	(303)	239	33	968842
1704	11.7	8.4	2.1	chr12	121209781	121209899	(12065410)	C	AluJr	SINE/Alu	(174)	138	1	968857
1901	13.1	0.3	1.4	chr12	121210498	121210794	(12064515)	+	AluJr	SINE/Alu	1	294	(18)	968859
12	28.7	0.0	0.0	chr12	121580126	121580167	(11695142)	+	A-rich	Low_complexity	1	42	(0)	969720
366	33.5	6.7	7.1	chr12	121610118	121610196	(11665113)	C	L2	LINE/L2	(790)	2629	2558	969812
237	32.8	4.9	0.8	chr12	121798105	121798221	(11477088)	+	MIRb	SINE/MIR	5	126	(142)	970347
562	21.1	6.0	5.5	chr12	121798983	121799163	(11476146)	+	MER5A	DNA/hAT-Charlie	8	189	(0)	970348
1859	13.4	5.2	0.7	chr12	122501193	122501483	(10773826)	+	AluJr	SINE/Alu	1	305	(7)	972005
2729	2.3	0.0	1.6	chr12	122774808	122775116	(10500193)	+	AluY	SINE/Alu	1	304	(7)	972650
446	30.2	15.1	2.6	chr12	124010621	124011001	(9264308)	C	L2c	LINE/L2	(9)	3378	2942	975295
212	37.1	8.8	6.3	chr12	124289186	124289548	(8985761)	+	Tigger19b	DNA/TcMar-Tigger	92	464	(86)	975846
17	13.1	0.0	0.0	chr12	124518202	124518227	(8757082)	+	(A)n	Simple_repeat	1	26	(0)	976196
15	4.3	4.2	0.0	chr12	124528125	124528148	(8747161)	+	(ACC)n	Simple_repeat	1	25	(0)	976217
16	19.5	5.3	3.3	chr12	124916598	124916654	(8358655)	+	GA-rich	Low_complexity	1	60	(0)	977140
256	28.6	7.7	3.2	chr12	124939171	124939339	(8335970)	+	MIRb	SINE/MIR	78	256	(6)	977199
460	27.6	5.6	3.2	chr12	124994842	124994998	(8280311)	+	MIRb	SINE/MIR	34	194	(74)	977335
347	31.6	10.6	6.6	chr12	130832718	130833140	(2442169)	+	L2b	LINE/L2	2913	3354	(21)	987282
237	33.5	9.8	3.0	chr12	132083857	132084056	(1191253)	+	L2b	LINE/L2	3109	3323	(52)	989054
404	22.1	8.3	2.5	chr12	132600347	132600504	(674805)	C	MLT1A	LTR/ERVL-MaLR	(206)	168	1	989645
19	11.0	2.4	2.4	chr13	19863432	19863472	(94500856)	+	(CTCCGC)n	Simple_repeat	1	42	(0)	993246
16	15.3	2.0	6.0	chr13	20127770	20127818	(94236510)	+	(TGAGG)n	Simple_repeat	1	50	(0)	993808
293	30.9	8.2	6.7	chr13	20159165	20159344	(94204984)	C	L2b	LINE/L2	(15)	3360	3178	993857
964	5.2	22.1	0.0	chr13	20159353	20159486	(94204842)	+	AluYh3	SINE/Alu	140	311	(0)	993858
1298	11.5	0.6	0.0	chr13	20476205	20476378	(93887950)	+	AluSx	SINE/Alu	132	306	(6)	994304
3003	9.1	6.2	1.6	chr13	23426661	23426921	(90937407)	C	MER4A1	LTR/ERV1	(185)	287	2	998825
18	10.5	0.0	0.0	chr13	25047466	25047496	(89316832)	+	(GGGA)n	Simple_repeat	1	31	(0)	1001212
31	19.1	3.9	0.0	chr13	26254168	26254244	(88110084)	+	(TGAG)n	Simple_repeat	1	80	(0)	1002972
4241	18.9	7.3	3.2	chr13	27151800	27152642	(87211686)	+	L1MB8	LINE/L1	6148	7032	(6)	1004400
364	36.1	4.7	0.5	chr13	27195293	27195498	(87168830)	+	L3b	LINE/CR1	4718	4932	(300)	1004496
198	26.2	3.2	0.0	chr13	27426267	27426327	(86938001)	C	L2a	LINE/L2	(4)	3422	3360	1004936
2100	22.2	5.9	10.3	chr13	27572936	27573558	(86790770)	+	L1M4	LINE/L1	3	596	(6921)	1005178
19	0.0	0.0	0.0	chr13	27620497	27620520	(86743808)	+	(CGC)n	Simple_repeat	1	24	(0)	1005251
606	24.4	1.2	3.0	chr13	27770891	27771059	(86593269)	C	MIRb	SINE/MIR	(74)	194	29	1005485
22	21.7	4.6	0.0	chr13	27969177	27969189	(86395139)	+	(TCCC)n	Simple_repeat	1	67	(0)	1005830
18	15.5	7.8	0.0	chr13	27969190	27969240	(86395088)	+	(CCTTCCT)n	Simple_repeat	1	55	(0)	1005831
14	18.4	2.7	0.0	chr13	28139237	28139273	(86225055)	+	(CCTCCTT)n	Simple_repeat	1	38	(0)	1006221
21969	12.1	2.2	1.3	chr13	28688078	28694338	(85669990)	C	L1PA7	LINE/L1	(0)	6339	12	1007171
15	0.0	0.0	0.0	chr13	29849785	29849803	(84514525)	+	(CGT)n	Simple_repeat	1	19	(0)	1008713
18	7.8	0.0	0.0	chr13	29850579	29850605	(84513723)	+	(GGC)n	Simple_repeat	1	27	(0)	1008715
655	18.9	15.9	1.1	chr13	30619846	30620027	(83744301)	+	MER20	DNA/hAT-Charlie	1	214	(5)	1010081
1497	19.6	21.4	9.3	chr13	30659689	30660460	(83703868)	C	MER52C	LTR/ERV1	(0)	1278	211	1010151
32	5.3	0.0	0.0	chr13	34942512	34942550	(79421778)	+	(GCAGCG)n	Simple_repeat	1	39	(0)	1016528
12	7.7	3.2	6.2	chr13	34943295	34943325	(79421003)	+	(CTCCT)n	Simple_repeat	1	32	(0)	1016533
1730	25.7	10.1	5.2	chr13	34967879	34968534	(79395794)	C	MER21C	LTR/ERVL	(124)	814	123	1016578
2599	32.3	8.6	1.5	chr13	38384831	38386269	(75978059)	C	L2a	LINE/L2	(0)	3426	1872	1021183
281	34.9	11.7	5.4	chr13	39578826	39579245	(74785083)	C	L2b	LINE/L2	(189)	3186	2737	1022831
18	21.6	2.1	0.0	chr13	39603217	39603264	(74761064)	+	(CCTCC)n	Simple_repeat	1	49	(0)	1022860
31	22.4	3.5	0.0	chr13	39603861	39603958	(74760370)	+	(TCTCTC)n	Simple_repeat	1	101	(0)	1022861
2384	5.0	0.0	0.0	chr13	40663993	40664271	(73700057)	+	AluSc5	SINE/Alu	1	279	(30)	1024464
1946	25.1	2.5	3.3	chr13	41541292	41541811	(72822517)	+	Zaphod3	DNA/hAT-Tip100	1	516	(2107)	1026005
773	18.8	0.6	1.2	chr13	41699864	41700030	(72664298)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	1026241
96	0.0	0.0	0.0	chr13	42049053	42049137	(72315191)	+	(GGGAAGGCG)n	Simple_repeat	1	85	(0)	1026763
4813	10.7	4.4	9.5	chr13	43054751	43055573	(71308755)	+	LTR19C	LTR/ERV1	1	779	(0)	1028336
10189	13.9	5.7	3.4	chr13	43056899	43059152	(71305176)	C	L1PB1	LINE/L1	(4349)	2514	3	1028332
11	27.6	0.0	0.0	chr13	43786271	43786309	(70578019)	+	G-rich	Low_complexity	1	39	(0)	1029332
379	31.2	3.2	6.3	chr13	44480988	44481305	(69883023)	C	L2	LINE/L2	(1154)	2265	1958	1030366
11	33.5	0.0	4.2	chr13	44575830	44575901	(69788427)	+	(GGAGGC)n	Simple_repeat	1	72	(0)	1030511
473	29.7	4.1	0.0	chr13	45219164	45219296	(69145032)	C	MIRb	SINE/MIR	(52)	178	37	1031820
346	31.9	6.6	2.9	chr13	45781989	45782162	(68582166)	+	Plat_L3	LINE/CR1	3127	3307	(279)	1032822
22	17.0	6.4	3.6	chr13	46211849	46211926	(68152402)	+	(GCCTC)n	Simple_repeat	1	83	(0)	1033525
13	19.7	0.0	6.5	chr13	49936438	49936483	(64427845)	+	G-rich	Low_complexity	1	46	(0)	1039354
19	18.2	0.0	7.7	chr13	50124589	50124653	(64239675)	+	(CTCCCCC)n	Simple_repeat	1	65	(0)	1039667
298	28.4	13.4	6.1	chr13	50698460	50698673	(63665655)	+	L2c	LINE/L2	3108	3339	(48)	1040510
25	31.9	0.0	6.5	chr13	51451818	51451970	(62912358)	+	G-rich	Low_complexity	1	153	(0)	1041598
14	28.3	0.0	5.6	chr13	51452898	51452968	(62911360)	+	(GGAGTGG)n	Simple_repeat	1	71	(0)	1041603
718	24.0	9.3	1.0	chr13	51636520	51636725	(62727603)	C	LTR108d_Mam	LTR/ERVL	(2)	542	318	1041907
350	30.7	2.4	3.8	chr13	51764314	51764523	(62599805)	C	L2b	LINE/L2	(194)	3181	2975	1042067
17016	12.4	2.2	2.6	chr13	57784177	57788027	(56576301)	C	L1PA10	LINE/L1	(2629)	3832	10	1049979
2537	11.0	6.3	0.5	chr13	58699136	58699538	(55664790)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1051090
212	25.2	16.1	5.7	chr13	59658681	59658785	(54705543)	+	MIR3	SINE/MIR	91	208	(0)	1052397
2361	8.2	1.0	0.0	chr13	64076291	64076581	(50287747)	C	AluSx	SINE/Alu	(18)	294	1	1058101
423	17.3	0.0	0.0	chr13	64076597	64076671	(50287657)	C	MER50-int	LTR/ERV1	(5454)	1751	1677	1058102
2972	23.3	4.1	8.1	chr13	64076673	64076778	(50287550)	C	MER52A	LTR/ERV1	(647)	1108	1004	1058103
6732	4.6	25.7	8.5	chr13	64076779	64078059	(50286269)	C	LTR12C	LTR/ERV1	(0)	1579	3	1058104
63	5.7	0.0	0.0	chr13	71866281	71866354	(42497974)	+	(GCT)n	Simple_repeat	1	74	(0)	1068016
1384	28.6	6.8	11.7	chr13	72800610	72801231	(41563097)	C	L2a	LINE/L2	(4)	3422	2810	1069364
230	19.4	3.1	11.4	chr13	75437801	75437870	(38926458)	C	MER135	DNA	(15)	213	150	1073325
19	13.9	3.9	3.8	chr13	75482400	75482450	(38881878)	+	(TCCT)n	Simple_repeat	1	53	(0)	1073409
6021	14.9	11.4	0.2	chr13	79393528	79394632	(34969696)	+	MER50-int	LTR/ERV1	1	1231	(5974)	1078857
13	16.4	2.9	0.0	chr13	94597181	94597197	(19767131)	+	(TTA)n	Simple_repeat	1	17	(0)	1098577
781	27.3	19.8	1.3	chr13	94597251	94597643	(19766685)	+	L2a	LINE/L2	2943	3426	(0)	1098578
255	36.8	5.3	1.5	chr13	95289351	95289528	(19074800)	+	MIRb	SINE/MIR	13	188	(74)	1099719
18	3.0	2.4	9.3	chr13	96090805	96090846	(18273482)	+	(CCG)n	Simple_repeat	1	43	(0)	1101086
12	20.6	2.9	0.0	chr13	96090998	96091031	(18273297)	+	(GCCC)n	Simple_repeat	1	35	(0)	1101087
787	20.6	1.9	0.0	chr13	98445717	98445876	(15918452)	C	MLT1C	LTR/ERVL-MaLR	(289)	178	16	1104670
4815	8.5	3.0	0.0	chr13	98485110	98485779	(15878549)	C	LTR8	LTR/ERV1	(0)	691	1	1104710
32	22.2	1.8	4.5	chr13	99606510	99606661	(14757667)	+	G-rich	Low_complexity	1	147	(0)	1106537
256	29.4	7.8	6.3	chr13	100392906	100393032	(13971296)	C	MIRc	SINE/MIR	(135)	133	2	1107893
549	28.3	5.6	1.0	chr13	102592225	102592513	(11771815)	C	LTR16B2	LTR/ERVL	(94)	368	66	1111008
1323	22.7	13.1	0.5	chr13	110445966	110446398	(3917930)	C	LTR53B	LTR/ERVL	(35)	498	3	1121260
31	17.3	4.0	4.8	chr13	110561742	110561853	(3802475)	+	(CGCCCC)n	Simple_repeat	1	111	(0)	1121399
1540	18.3	9.3	0.3	chr13	110600335	110600674	(3763654)	C	MLT2D	LTR/ERVL	(40)	374	1	1121481
27	0.0	2.9	2.9	chr13	110600877	110600910	(3763418)	+	(TGTTGCTT)n	Simple_repeat	1	35	(0)	1121483
336	30.6	0.0	1.0	chr13	110726824	110726922	(3637406)	C	MIR3	SINE/MIR	(48)	160	63	1121652
26	10.9	4.6	4.4	chr13	112072661	112072725	(2291603)	+	(CTCC)n	Simple_repeat	1	68	(0)	1123134
18	16.6	5.2	3.3	chr13	112603829	112603886	(1760442)	+	G-rich	Low_complexity	1	61	(0)	1123681
517	27.1	7.1	0.0	chr13	112694142	112694285	(1670043)	+	MIR	SINE/MIR	65	219	(43)	1123843
268	23.3	10.4	0.8	chr13	113489458	113489578	(874750)	+	L2	LINE/L2	2073	2206	(1213)	1124761
11	16.9	2.9	2.8	chr13	113490128	113490162	(874166)	+	(ACAGCT)n	Simple_repeat	1	36	(0)	1124762
12	24.0	1.6	6.5	chr13	113491013	113491073	(873255)	+	(GGCGG)n	Simple_repeat	1	62	(0)	1124764
1174	21.7	13.9	1.2	chr13	113550458	113550814	(813514)	C	MLT1A1	LTR/ERVL-MaLR	(12)	396	1	1124841
15	26.3	5.5	3.1	chr13	113584448	113584538	(779790)	+	(CGCACG)n	Simple_repeat	1	96	(0)	1124892
16	21.4	2.3	0.0	chr13	113584581	113584623	(779705)	+	GA-rich	Low_complexity	1	44	(0)	1124893
17	10.3	0.0	3.0	chr13	113861684	113861716	(502612)	+	(CCTGCC)n	Simple_repeat	1	33	(0)	1125061
544	0.0	0.0	22.3	chr14	20663192	20663285	(86380433)	C	tRNA-Tyr-TAC	tRNA	(3)	73	1	1128422
2159	10.0	2.4	4.9	chr14	20682388	20682735	(86360983)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1128458
644	1.4	0.0	0.0	chr14	20684016	20684089	(86359629)	+	tRNA-Pro-CCA	tRNA	1	74	(1)	1128460
16	19.4	2.4	0.0	chr14	20971438	20971478	(86072240)	+	(CTCC)n	Simple_repeat	1	42	(0)	1128895
20	21.2	3.5	5.7	chr14	21070606	21070690	(85973028)	+	(TCC)n	Simple_repeat	1	88	(0)	1129044
12	8.1	3.6	3.5	chr14	21070690	21070717	(85973001)	+	(CTGTC)n	Simple_repeat	1	29	(0)	1129045
12	16.6	4.5	4.3	chr14	21094270	21094313	(85949405)	+	G-rich	Low_complexity	1	46	(0)	1129073
31	11.1	5.6	2.6	chr14	21098418	21098489	(85945229)	+	(CCCGGC)n	Simple_repeat	1	76	(0)	1129081
291	19.6	0.0	0.0	chr14	21098728	21098778	(85944940)	C	Plat_L3	LINE/CR1	(23)	3563	3513	1129083
3953	21.9	6.8	8.6	chr14	21191757	21191933	(85851785)	+	L1ME3	LINE/L1	961	1130	(5503)	1129250
6733	20.8	9.8	3.7	chr14	21191934	21193578	(85850140)	+	MER52A	LTR/ERV1	1	1755	(0)	1129252
4354	11.5	1.1	0.5	chr14	21308566	21309205	(85734513)	C	LTR9B	LTR/ERV1	(0)	644	1	1129498
782	22.5	4.5	0.0	chr14	21699232	21699400	(85344318)	+	L1MB5	LINE/L1	5861	6037	(137)	1130262
9907	13.4	5.3	2.5	chr14	21699435	21702281	(85341437)	+	L1PBa	LINE/L1	538	3507	(3355)	1130265
2404	7.8	0.0	0.3	chr14	22559796	22560090	(84483628)	+	AluSx1	SINE/Alu	2	295	(17)	1131307
1126	19.4	17.2	4.6	chr14	22788723	22789030	(84254688)	+	L1ME3A	LINE/L1	5820	6169	(4)	1131704
424	27.0	12.1	0.2	chr14	23052892	23053043	(83990675)	+	MIR	SINE/MIR	28	194	(74)	1132230
307	20.4	22.8	1.0	chr14	23053072	23053170	(83990548)	+	MIR	SINE/MIR	64	190	(72)	1132231
15	16.9	4.0	3.9	chr14	23183710	23183759	(83859959)	+	(CCCTCCT)n	Simple_repeat	1	52	(0)	1132424
12	13.9	6.2	0.0	chr14	23551460	23551491	(83492227)	+	(CCCT)n	Simple_repeat	1	34	(0)	1133022
13	0.0	0.0	0.0	chr14	24079912	24079928	(82963790)	+	(TGG)n	Simple_repeat	1	17	(0)	1133715
24	18.7	0.0	0.0	chr14	24080025	24080068	(82963650)	+	(TC)n	Simple_repeat	1	44	(0)	1133716
23	26.1	1.1	3.4	chr14	24135929	24136015	(82907703)	+	(GGAGGCG)n	Simple_repeat	1	88	(0)	1133803
185	34.8	1.7	4.2	chr14	24242824	24242943	(82800775)	+	MIRc	SINE/MIR	56	172	(96)	1133958
31	12.3	0.0	0.0	chr14	24366548	24366593	(82677125)	+	(A)n	Simple_repeat	1	46	(0)	1134157
21	0.0	3.1	3.0	chr14	28766883	28766914	(78276804)	+	(GCT)n	Simple_repeat	1	33	(0)	1139688
19	24.7	0.0	1.8	chr14	28766917	28766942	(78276776)	+	GA-rich	Low_complexity	1	53	(0)	1139689
18	12.0	0.0	0.0	chr14	28766943	28766969	(78276749)	+	(G)n	Simple_repeat	1	27	(0)	1139690
13	35.4	2.1	2.1	chr14	28767705	28767797	(78275921)	+	(GGACGG)n	Simple_repeat	1	95	(0)	1139695
35	0.0	0.0	0.0	chr14	32934320	32934349	(74109369)	+	(GT)n	Simple_repeat	1	30	(0)	1145775
13	17.6	0.0	2.9	chr14	34873685	34873718	(72170000)	+	(CCCTTC)n	Simple_repeat	1	34	(0)	1148820
28	0.0	0.0	0.0	chr14	36553779	36553808	(70489910)	+	(A)n	Simple_repeat	1	30	(0)	1151762
1087	20.8	0.5	0.0	chr14	36553913	36554114	(70489604)	C	MER3	DNA/hAT-Charlie	(0)	209	7	1151763
14	13.2	2.9	2.8	chr14	37591276	37591310	(69452408)	+	(GGTTT)n	Simple_repeat	1	36	(0)	1153165
14	19.1	0.0	2.6	chr14	37591932	37591969	(69451749)	+	(GCTCCC)n	Simple_repeat	1	38	(0)	1153166
20	25.8	0.0	4.3	chr14	49767563	49767632	(57276086)	+	(CGG)n	Simple_repeat	1	70	(0)	1168591
440	29.7	5.6	6.4	chr14	49850058	49850107	(57193611)	C	MIR	SINE/MIR	(6)	256	207	1168754
30	20.0	1.0	6.7	chr14	50830712	50830815	(56212903)	+	(CCCCGC)n	Simple_repeat	1	105	(0)	1170531
459	23.9	6.1	0.0	chr14	53151497	53151634	(53892084)	C	MIR	SINE/MIR	(30)	232	86	1174113
662	18.8	17.6	1.2	chr14	54512511	54512752	(52530966)	+	LTR50	LTR/ERVL	9	298	(497)	1176043
21	6.5	0.0	2.9	chr14	54567028	54567061	(52476657)	+	(GGA)n	Simple_repeat	1	34	(0)	1176155
12	11.5	3.3	3.2	chr14	54568121	54568150	(52475568)	+	(GCC)n	Simple_repeat	1	31	(0)	1176157
12	23.1	3.7	3.6	chr14	54568185	54568238	(52475480)	+	(GGCCA)n	Simple_repeat	1	56	(0)	1176158
658	30.7	8.4	3.3	chr14	58682340	58682781	(48360937)	C	L2c	LINE/L2	(1)	3425	2814	1182640
21	22.7	2.9	2.8	chr14	59870814	59870883	(47172835)	+	(CTC)n	Simple_repeat	1	72	(0)	1184293
13	24.6	3.5	3.4	chr14	59870849	59870905	(47172813)	+	(GCT)n	Simple_repeat	1	59	(0)	1184294
22	17.3	0.0	0.0	chr14	60646608	60646646	(46397072)	+	A-rich	Low_complexity	1	39	(0)	1185328
20	24.3	2.6	2.6	chr14	60649205	60649280	(46394438)	+	G-rich	Low_complexity	1	78	(0)	1185329
25	21.0	5.5	3.1	chr14	60724092	60724182	(46319536)	+	(CCTC)n	Simple_repeat	1	96	(0)	1185459
522	28.4	7.6	0.9	chr14	61438008	61438227	(45605491)	C	MIR	SINE/MIR	(26)	236	1	1186509
1511	15.4	0.0	8.6	chr14	61519321	61519408	(45524310)	C	AluJo	SINE/Alu	(188)	124	45	1186625
1655	28.6	8.8	5.5	chr14	61602386	61603208	(45440510)	+	L1MEg1	LINE/L1	3	783	(5452)	1186753
17	31.6	2.7	0.0	chr14	63045482	63045555	(43998163)	+	(CTG)n	Simple_repeat	1	76	(0)	1188630
219	32.7	5.2	1.8	chr14	63678755	63678866	(43364852)	+	L2c	LINE/L2	2934	3049	(338)	1189784
2422	8.4	0.7	0.0	chr14	63678871	63679167	(43364551)	C	AluSq2	SINE/Alu	(14)	299	1	1189785
2034	15.4	0.0	0.3	chr14	64509088	64509393	(42534325)	+	AluJb	SINE/Alu	1	305	(7)	1191416
25	16.5	1.8	1.8	chr14	67241340	67241395	(39802323)	+	(GGC)n	Simple_repeat	1	57	(0)	1195681
12	11.5	3.3	3.2	chr14	67241593	67241622	(39802096)	+	(GCGG)n	Simple_repeat	1	31	(0)	1195682
15	8.5	0.0	0.0	chr14	67620277	67620301	(39423417)	+	(GAGG)n	Simple_repeat	1	25	(0)	1196435
1133	12.0	17.9	7.1	chr14	67675227	67675493	(39368225)	+	AluJo	SINE/Alu	1	302	(10)	1196534
12	3.8	6.5	6.1	chr14	68793489	68793519	(38250199)	+	(GTT)n	Simple_repeat	1	33	(0)	1198273
204	31.5	0.0	0.0	chr14	70359196	70359249	(36684469)	+	MIRb	SINE/MIR	117	170	(98)	1201066
15	4.1	4.0	0.0	chr14	70642540	70642564	(36401154)	+	(GCCGC)n	Simple_repeat	1	26	(0)	1201470
16	0.0	0.0	0.0	chr14	70735367	70735383	(36308335)	+	(T)n	Simple_repeat	1	17	(0)	1201645
120	26.7	6.7	0.8	chr14	70822242	70822735	(36220983)	+	(CT)n	Simple_repeat	1	527	(0)	1201805
2220	16.2	5.6	0.5	chr14	71383499	71383902	(35659816)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1202726
1294	16.0	9.6	1.5	chr14	71607532	71607798	(35435920)	C	LTR48	LTR/ERV1	(496)	291	1	1203087
618	20.6	11.2	5.7	chr14	73644241	73644467	(33399251)	C	L1M5	LINE/L1	(436)	5688	5448	1206758
302	21.2	7.2	10.3	chr14	73852551	73852603	(33191115)	C	L2a	LINE/L2	(65)	3361	3310	1207230
882	27.2	14.5	8.4	chr14	74301928	74302614	(32741104)	+	L1ME5	LINE/L1	5419	6187	(7)	1208197
13	14.5	3.2	0.0	chr14	74492777	74492807	(32550911)	+	A-rich	Low_complexity	1	32	(0)	1208641
200	27.6	1.7	0.0	chr14	75294969	75295026	(31748692)	+	L2c	LINE/L2	3323	3381	(6)	1210141
12	22.6	3.1	6.1	chr14	75428647	75428710	(31615008)	+	(GGTGGA)n	Simple_repeat	1	66	(0)	1210445
1680	13.6	7.6	1.6	chr14	76785057	76785378	(30258340)	+	L1MA4	LINE/L1	5958	6300	(0)	1212936
1066	30.2	11.0	1.2	chr14	76848624	76849139	(30194579)	C	L2a	LINE/L2	(1534)	1885	1313	1213039
2085	11.9	0.0	1.7	chr14	76849155	76849456	(30194262)	C	AluSz	SINE/Alu	(15)	297	1	1213056
19	17.2	0.0	0.0	chr14	76919829	76919861	(30123857)	+	A-rich	Low_complexity	1	33	(0)	1213203
14	24.1	2.1	2.1	chr14	76919936	76919982	(30123736)	+	(GCG)n	Simple_repeat	1	48	(0)	1213204
22	22.3	3.9	5.6	chr14	76947454	76947571	(30096147)	+	(TGCCCC)n	Simple_repeat	1	115	(0)	1213267
322	27.5	15.6	1.1	chr14	76956108	76956287	(30087431)	C	L2a	LINE/L2	(541)	2878	2668	1213288
31	0.0	0.0	0.0	chr14	77027305	77027333	(30016385)	+	(GCG)n	Simple_repeat	1	29	(0)	1213464
58	4.8	0.0	0.0	chr14	77027419	77027483	(30016235)	+	(TGC)n	Simple_repeat	1	65	(0)	1213465
23	17.4	0.0	0.0	chr14	77027487	77027531	(30016187)	+	(CGC)n	Simple_repeat	1	45	(0)	1213466
12	8.0	0.0	9.4	chr14	77028867	77028898	(30014820)	+	(CCCCT)n	Simple_repeat	1	32	(0)	1213467
12	13.9	0.0	0.0	chr14	77616616	77616639	(29427079)	+	(GGC)n	Simple_repeat	1	24	(0)	1214576
13	13.1	0.0	0.0	chr14	79279599	79279623	(27764095)	+	(GCT)n	Simple_repeat	1	25	(0)	1217536
339	32.5	21.1	1.3	chr14	81385719	81386108	(25657610)	C	L2a	LINE/L2	(1)	3425	2938	1220544
277	30.0	1.7	3.5	chr14	89284312	89284419	(17759299)	C	MIR3	SINE/MIR	(115)	153	48	1231794
24	15.7	0.0	6.2	chr14	89417243	89417319	(17626399)	+	GA-rich	Low_complexity	1	72	(0)	1232039
230	27.3	0.0	0.0	chr14	89576659	89576713	(17467005)	+	UCON15	Unknown	89	143	(204)	1232331
16	21.6	4.2	0.0	chr14	89576748	89576795	(17466923)	+	(CCTC)n	Simple_repeat	1	50	(0)	1232332
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
15	21.9	0.0	6.7	chr14	90397289	90397295	(16646423)	+	(TTTTTTG)n	Simple_repeat	1	13	(47)	1233835
16	3.4	6.2	2.9	chr14	90397296	90397327	(16646391)	+	(TTGT)n	Simple_repeat	1	34	(0)	1233836
195	31.6	13.7	2.8	chr14	91065114	91065295	(15978423)	C	L2c	LINE/L2	(1936)	1483	1279	1234942
268	29.1	11.8	2.3	chr14	91374401	91374615	(15669103)	C	L2a	LINE/L2	(149)	3277	3040	1235589
218	38.5	0.9	0.0	chr14	96054146	96054249	(10989469)	C	L3	LINE/CR1	(67)	4032	3928	1244164
1266	11.6	22.6	0.0	chr14	96742286	96742518	(10301200)	C	AluSx1	SINE/Alu	(11)	301	1	1245420
33	21.7	3.3	1.1	chr14	96742519	96742541	(10301177)	+	(TCTC)n	Simple_repeat	1	24	(0)	1245421
12	19.9	0.0	0.0	chr14	96978705	96978733	(10064985)	+	(TTAT)n	Simple_repeat	1	29	(0)	1245847
299	30.0	2.9	11.9	chr14	98892351	98892577	(8151141)	+	MIR	SINE/MIR	44	249	(13)	1249129
11	10.6	0.0	10.5	chr14	99271098	99271135	(7772583)	+	(CCCCAG)n	Simple_repeat	1	38	(0)	1249753
48	15.6	1.1	0.0	chr14	99274710	99274797	(7768921)	+	(CCT)n	Simple_repeat	1	89	(0)	1249761
380	29.1	9.9	3.4	chr14	99467942	99468119	(7575599)	C	MIRb	SINE/MIR	(23)	245	55	1250078
19	13.1	8.0	0.0	chr14	99523174	99523223	(7520495)	+	G-rich	Low_complexity	1	54	(0)	1250149
185	36.1	1.6	0.0	chr14	99546171	99546231	(7497487)	C	L2b	LINE/L2	(5)	3370	3309	1250180
758	27.8	15.5	0.4	chr14	99605510	99606066	(7437652)	C	L2a	LINE/L2	(3)	3423	2759	1250261
292	31.9	4.2	0.0	chr14	99946120	99946232	(7097486)	C	L1MC5a	LINE/L1	(169)	2608	2491	1250876
1965	12.7	0.3	8.1	chr14	100023197	100023371	(7020347)	C	AluSx1	SINE/Alu	(6)	306	137	1251030
1511	26.0	9.3	4.1	chr14	100024712	100025645	(7018073)	+	L2a	LINE/L2	2352	3348	(78)	1251034
184	28.6	5.0	4.3	chr14	100212939	100213077	(6830641)	C	L2c	LINE/L2	(230)	3157	3018	1251444
12	16.6	0.0	0.0	chr14	100213199	100213225	(6830493)	+	G-rich	Low_complexity	1	27	(0)	1251445
1904	14.6	4.2	0.0	chr14	100293838	100294131	(6749587)	+	AluSz	SINE/Alu	1	307	(5)	1251609
243	26.7	3.2	0.0	chr14	100294561	100294620	(6749098)	C	MIRc	SINE/MIR	(114)	154	93	1251610
15	30.4	0.0	0.0	chr14	100376199	100376250	(6667468)	+	(TCCC)n	Simple_repeat	1	52	(0)	1251757
262	30.9	6.2	1.2	chr14	100546144	100546283	(6497435)	+	MIRb	SINE/MIR	10	158	(110)	1252035
14	36.6	5.3	1.7	chr14	101565270	101565382	(5478336)	+	(TCTC)n	Simple_repeat	1	119	(0)	1253319
518	25.3	15.0	4.4	chr14	101905762	101906056	(5137662)	+	L2a	LINE/L2	3041	3376	(50)	1253846
483	18.2	6.7	3.1	chr14	102524748	102524877	(4518841)	+	MLT1M	LTR/ERVL-MaLR	121	255	(417)	1255087
2585	11.8	4.3	4.8	chr14	103402658	103403120	(3640598)	C	MER65C	LTR/ERV1	(0)	461	1	1256753
18	0.0	0.0	3.9	chr14	103521142	103521167	(3522551)	+	(CCT)n	Simple_repeat	1	26	(0)	1256987
784	11.9	1.5	3.7	chr14	103528850	103528983	(3514735)	C	AluJo	SINE/Alu	(181)	131	1	1256995
387	21.6	5.7	3.3	chr14	103607157	103607276	(3436442)	+	MLT1C	LTR/ERVL-MaLR	338	460	(7)	1257143
261	29.9	6.5	5.4	chr14	103837355	103837520	(3206198)	+	L2	LINE/L2	2434	2601	(818)	1257609
19	35.3	0.0	0.0	chr14	103837536	103837612	(3206106)	+	(CACA)n	Simple_repeat	1	77	(0)	1257610
699	21.2	2.7	1.6	chr14	104078003	104078184	(2965534)	+	LTR41C	LTR/ERVL	2	185	(516)	1258068
336	24.4	10.3	7.1	chr14	104078215	104078439	(2965279)	+	LTR41C	LTR/ERVL	363	595	(106)	1258068
227	31.3	0.0	0.0	chr14	104275599	104275665	(2768053)	+	MLT1I	LTR/ERVL-MaLR	73	139	(272)	1258253
12	20.3	6.7	0.0	chr14	104865760	104865804	(2177914)	+	(CCCCGG)n	Simple_repeat	1	48	(0)	1258950
17	18.7	1.4	9.5	chr14	104865851	104865923	(2177795)	+	(CCT)n	Simple_repeat	1	74	(0)	1258951
702	24.6	16.1	2.2	chr14	105173373	105173899	(1869819)	+	MLT1E1	LTR/ERVL-MaLR	5	620	(33)	1259351
311	20.4	4.4	6.8	chr15	20407760	20407901	(81583288)	+	MLT1H1	LTR/ERVL-MaLR	415	565	(26)	1263292
13	16.3	0.0	5.3	chr15	28884401	28884438	(73106751)	+	G-rich	Low_complexity	1	38	(0)	1274694
625	26.6	9.6	0.7	chr15	35186444	35186719	(66804470)	+	Tigger13a	DNA/TcMar-Tigger	3	305	(466)	1284074
46	18.7	0.0	0.0	chr15	37100238	37100328	(64890861)	+	(TCTC)n	Simple_repeat	1	91	(0)	1286510
16	3.8	0.0	6.5	chr15	37102776	37102806	(64888383)	+	(AAAAG)n	Simple_repeat	1	31	(0)	1286520
54	0.0	0.0	0.0	chr15	38251698	38251743	(63739446)	+	(AC)n	Simple_repeat	1	46	(0)	1288012
12	18.4	5.4	0.0	chr15	38251927	38251963	(63739226)	+	(GGAGCAC)n	Simple_repeat	1	39	(0)	1288013
181	7.1	0.0	0.0	chr15	40334134	40334161	(61657028)	+	L2b	LINE/L2	3339	3366	(9)	1291023
18	17.2	4.7	4.5	chr15	40441291	40441354	(61549835)	+	GA-rich	Low_complexity	1	67	(0)	1291195
13	0.0	5.0	0.0	chr15	40441422	40441441	(61549748)	+	(GGAC)n	Simple_repeat	1	21	(0)	1291196
1845	22.4	8.6	0.0	chr15	40477697	40478121	(61513068)	C	LTR16B1	LTR/ERVL	(2)	478	14	1291248
220	18.4	11.6	5.0	chr15	40764817	40764896	(61226293)	+	MIR3	SINE/MIR	98	183	(25)	1291883
13	16.9	4.5	4.3	chr15	40927824	40927867	(61063322)	+	(CCA)n	Simple_repeat	1	46	(0)	1292210
195	33.9	12.2	3.2	chr15	41492887	41493072	(60498117)	C	MIRc	SINE/MIR	(17)	251	47	1293493
224	28.4	0.0	10.8	chr15	41493063	41493145	(60498044)	C	MIR3	SINE/MIR	(54)	154	81	1293494
19	7.2	0.0	0.0	chr15	41564509	41564537	(60426652)	+	(GGGA)n	Simple_repeat	1	29	(0)	1293653
632	30.1	6.1	1.3	chr15	42483595	42483989	(59507200)	+	L2b	LINE/L2	2825	3235	(152)	1295192
15	25.2	1.7	3.3	chr15	42737122	42737181	(59254008)	+	(GGCGGC)n	Simple_repeat	1	61	(0)	1295667
245	22.7	18.2	1.1	chr15	43798762	43798883	(58192306)	C	MIR	SINE/MIR	(111)	157	12	1297649
20	8.6	5.4	0.0	chr15	47717493	47717529	(54273660)	+	(TGC)n	Simple_repeat	1	39	(0)	1303776
225	28.2	4.1	1.4	chr15	47727818	47727889	(54263300)	+	CR1-13_AMi	LINE/CR1	511	584	(140)	1303794
188	25.0	7.2	5.9	chr15	48890363	48890430	(53100759)	C	L3	LINE/CR1	(6)	4093	4025	1305482
12	5.5	0.0	0.0	chr15	50686568	50686586	(51304603)	+	(CTC)n	Simple_repeat	1	19	(0)	1308294
18	17.9	0.0	4.2	chr15	51094767	51094814	(50896375)	+	(GCGCCCC)n	Simple_repeat	1	48	(0)	1309038
30	15.3	1.7	0.0	chr15	55993613	55993670	(45997519)	+	GA-rich	Low_complexity	1	59	(0)	1316534
13	15.7	0.0	7.3	chr15	58038731	58038771	(43952418)	+	(TGGTAA)n	Simple_repeat	1	41	(0)	1319529
14	30.1	2.4	4.7	chr15	58749733	58749815	(43241374)	+	(CCTT)n	Simple_repeat	1	85	(0)	1320717
13	5.3	0.0	0.0	chr15	58772051	58772070	(43219119)	+	(AGG)n	Simple_repeat	1	20	(0)	1320769
2147	11.5	2.4	0.3	chr15	59704403	59704689	(42286500)	C	AluSx3	SINE/Alu	(17)	294	2	1322600
14	4.5	0.0	4.0	chr15	59997380	59997404	(41993785)	+	(CTTT)n	Simple_repeat	1	25	(0)	1323095
16	25.4	1.7	3.3	chr15	60004161	60004220	(41986969)	+	(CCT)n	Simple_repeat	1	61	(0)	1323102
290	29.7	2.8	8.6	chr15	60396904	60397054	(41594135)	C	MIRc	SINE/MIR	(1)	267	126	1323704
26	22.4	5.1	4.0	chr15	61228962	61229049	(40762140)	+	(CGCCGCC)n	Simple_repeat	44	163	(0)	1324990
20	11.6	0.0	8.9	chr15	63042597	63042652	(38948537)	+	G-rich	Low_complexity	1	56	(0)	1327869
13	21.5	2.9	7.1	chr15	63042762	63042829	(38948360)	+	(CCGCCG)n	Simple_repeat	1	70	(0)	1327870
236	25.6	3.7	0.0	chr15	63195429	63195506	(38795683)	C	UCON86	LINE/L2	(281)	401	321	1328145
770	11.1	1.7	0.0	chr15	63382162	63382278	(38608911)	C	LTR8	LTR/ERV1	(0)	691	573	1328439
2178	13.2	1.0	0.0	chr15	63382280	63382582	(38608607)	C	AluSx	SINE/Alu	(5)	307	2	1328440
339	32.3	7.1	3.5	chr15	63465435	63465691	(38525498)	+	L1ME4c	LINE/L1	85	351	(479)	1328616
447	27.9	8.2	1.1	chr15	63478389	63478569	(38512620)	C	LTR78	LTR/ERV1	(743)	561	367	1328649
1001	25.9	2.7	7.3	chr15	63479744	63480059	(38511130)	C	LTR101_Mam	LTR/ERVL	(483)	346	46	1328652
3808	22.7	8.9	5.8	chr15	63519065	63520554	(38470635)	C	L1MC4	LINE/L1	(148)	7847	6213	1328734
410	29.2	15.5	3.7	chr15	64149496	64149861	(37841328)	C	L2b	LINE/L2	(234)	3141	2740	1329855
1219	23.8	18.7	0.6	chr15	65082506	65083067	(36908122)	+	L2a	LINE/L2	2745	3418	(8)	1331848
20	11.0	4.9	2.3	chr15	65368869	65368909	(36622280)	+	GA-rich	Low_complexity	1	43	(0)	1332472
239	35.5	6.1	0.7	chr15	65368926	65369064	(36622125)	C	L2c	LINE/L2	(14)	3373	3227	1332473
13	26.2	3.7	5.9	chr15	65377693	65377700	(36613489)	+	(CGG)n	Simple_repeat	1	12	(73)	1332490
20	10.1	0.0	0.0	chr15	65377701	65377732	(36613457)	+	(GCA)n	Simple_repeat	1	32	(0)	1332491
13	26.2	3.7	5.9	chr15	65377733	65377774	(36613415)	+	(CGG)n	Simple_repeat	13	85	(0)	1332490
304	12.2	0.0	0.0	chr15	65414950	65414990	(36576199)	C	Alu	SINE/Alu	(91)	42	2	1332569
189	28.3	0.0	7.0	chr15	65787811	65787867	(36203322)	+	L2c	LINE/L2	3298	3350	(37)	1333337
407	28.8	4.6	2.7	chr15	65824176	65824325	(36166864)	C	MIRb	SINE/MIR	(112)	156	4	1333414
491	19.9	16.9	4.3	chr15	65824397	65824606	(36166583)	+	MIRc	SINE/MIR	3	244	(24)	1333415
223	29.3	5.7	7.9	chr15	66567121	66567246	(35423943)	+	L2c	LINE/L2	3257	3379	(8)	1334956
12	22.4	2.7	0.0	chr15	66701480	66701516	(35289673)	+	(CCGG)n	Simple_repeat	1	38	(0)	1335296
17	20.9	0.0	5.5	chr15	66702311	66702366	(35288823)	+	(GAGC)n	Simple_repeat	1	52	(0)	1335298
197	27.2	4.7	1.5	chr15	66775443	66775554	(35215635)	C	MIR3	SINE/MIR	(32)	198	82	1335428
980	18.3	4.0	0.5	chr15	66851494	66851713	(35139476)	C	L1MC5	LINE/L1	(9)	9295	9068	1335580
198	11.4	0.0	2.8	chr15	66851714	66851749	(35139440)	C	L2	LINE/L2	(774)	2645	2611	1335581
17	3.7	6.7	3.1	chr15	67147148	67147177	(34844012)	+	(GA)n	Simple_repeat	1	32	(0)	1336157
579	31.8	9.2	10.3	chr15	67813271	67813708	(34177481)	+	L2c	LINE/L2	2942	3386	(1)	1337167
16	19.2	0.0	9.4	chr15	67823594	67823657	(34167532)	+	(CCG)n	Simple_repeat	1	64	(0)	1337184
13	13.1	0.0	7.7	chr15	67968242	67968280	(34022909)	+	(CAGAGG)n	Simple_repeat	1	39	(0)	1337479
1045	19.1	8.6	1.5	chr15	67999313	67999516	(33991673)	C	AluJr	SINE/Alu	(92)	220	1	1337552
309	31.6	9.2	6.7	chr15	68073407	68073704	(33917485)	C	L2c	LINE/L2	(59)	3328	3023	1337695
500	29.4	20.7	1.4	chr15	68073750	68074232	(33916957)	C	L2c	LINE/L2	(545)	2874	2275	1337695
217	25.5	9.7	3.3	chr15	68228593	68228753	(33762436)	+	L2b	LINE/L2	3032	3198	(177)	1337959
253	25.9	1.7	1.4	chr15	68271080	68271167	(33720022)	+	MIR	SINE/MIR	79	174	(94)	1338047
1098	28.7	6.0	1.5	chr15	68271191	68271650	(33719539)	+	L1ME4a	LINE/L1	5520	6001	(123)	1338042
18	3.8	0.0	3.5	chr15	68578895	68578923	(33412266)	+	(TCC)n	Simple_repeat	1	29	(0)	1338603
16	33.4	1.3	1.3	chr15	68578935	68579011	(33412178)	+	(TCCC)n	Simple_repeat	1	78	(0)	1338604
13	19.4	0.0	2.7	chr15	68818487	68818523	(33172666)	+	(GCCCCC)n	Simple_repeat	1	37	(0)	1339117
11	31.8	1.9	0.0	chr15	68818933	68818986	(33172203)	+	(CCCGCC)n	Simple_repeat	1	55	(0)	1339119
13	31.8	4.7	3.6	chr15	68843154	68843260	(33147929)	+	A-rich	Low_complexity	1	112	(0)	1339159
3327	13.9	4.1	11.8	chr15	68991613	68992346	(32998843)	C	LTR76	LTR/ERV1	(0)	675	1	1339417
557	29.0	10.2	4.0	chr15	69088413	69088660	(32902529)	+	MLT1K	LTR/ERVL-MaLR	331	595	(0)	1339599
501	23.4	7.6	4.9	chr15	69090531	69090703	(32900486)	+	L2a	LINE/L2	3192	3416	(10)	1339604
303	26.0	0.0	6.3	chr15	69143826	69143936	(32847253)	C	MIRb	SINE/MIR	(0)	268	165	1339719
332	33.3	11.3	4.3	chr15	70089095	70089423	(31901766)	+	L2c	LINE/L2	3029	3383	(4)	1341452
17	20.2	2.0	2.0	chr15	70097428	70097476	(31893713)	+	(CTGCCG)n	Simple_repeat	1	50	(0)	1341463
11	11.2	6.9	0.0	chr15	70099568	70099596	(31891593)	+	(TCCCCC)n	Simple_repeat	1	31	(0)	1341465
324	30.0	10.4	3.7	chr15	70100887	70101073	(31890116)	C	MIRb	SINE/MIR	(20)	248	48	1341467
43	31.7	3.2	0.0	chr15	70162164	70162249	(31828940)	+	(TGAGAG)n	Simple_repeat	2	192	(0)	1341595
608	32.8	6.6	5.9	chr15	70256256	70256614	(31734575)	C	L2c	LINE/L2	(19)	3368	3010	1341803
226	33.6	8.0	5.7	chr15	70348012	70348465	(31642724)	+	LTR16E1	LTR/ERVL	42	506	(32)	1341987
299	26.9	3.6	6.9	chr15	70425657	70425772	(31565417)	+	MER91C	DNA/hAT-Tip100	1	112	(28)	1342123
3028	15.7	3.6	2.4	chr15	70569030	70569578	(31421611)	C	MER68	LTR/ERVL	(7)	556	1	1342389
12	20.5	6.7	0.0	chr15	70750462	70750506	(31240683)	+	(GCTCTTT)n	Simple_repeat	1	48	(0)	1342672
16	13.2	0.0	0.0	chr15	73052406	73052430	(28938759)	+	(C)n	Simple_repeat	1	25	(0)	1346526
12	16.5	5.9	0.0	chr15	73052443	73052476	(28938713)	+	(CTCCC)n	Simple_repeat	1	36	(0)	1346527
19	17.9	1.9	3.6	chr15	73052520	73052573	(28938616)	+	G-rich	Low_complexity	1	55	(0)	1346528
319	26.3	0.0	2.6	chr15	73755659	73755736	(28235453)	C	MIRb	SINE/MIR	(2)	266	191	1347664
677	16.9	1.2	2.4	chr15	73755737	73755879	(28235310)	C	L1MB3	LINE/L1	(160)	6023	5887	1347665
467	33.9	15.5	2.4	chr15	73755898	73756356	(28234833)	+	L3	LINE/CR1	3305	3834	(265)	1347666
16	19.4	1.7	6.6	chr15	73924656	73924716	(28066473)	+	(TCCC)n	Simple_repeat	1	58	(0)	1347950
195	36.2	3.1	2.3	chr15	74177845	74177974	(27813215)	+	MamSINE1	SINE/tRNA-RTE	9	139	(151)	1348393
245	23.1	0.0	0.0	chr15	74196280	74196331	(27794858)	C	L2a	LINE/L2	(0)	3426	3375	1348429
402	20.5	16.5	3.0	chr15	74228227	74228423	(27762766)	+	MIR	SINE/MIR	15	245	(23)	1348487
204	30.0	6.8	0.0	chr15	74228477	74228586	(27762603)	C	L2c	LINE/L2	(327)	3060	2943	1348486
1268	24.3	11.3	5.9	chr15	74490026	74490757	(27500432)	+	L2a	LINE/L2	2645	3426	(0)	1348922
308	32.1	1.2	2.9	chr15	74781356	74781528	(27209661)	+	L2c	LINE/L2	2899	3068	(351)	1349515
312	33.3	5.4	3.0	chr15	74781572	74781769	(27209420)	+	L2c	LINE/L2	3185	3387	(0)	1349515
189	26.9	25.8	2.0	chr15	74835244	74835440	(27155749)	C	MIRb	SINE/MIR	(6)	262	3	1349608
951	24.8	9.7	5.6	chr15	74889338	74889909	(27101280)	+	L2a	LINE/L2	2817	3426	(0)	1349709
184	33.3	0.0	6.0	chr15	74890362	74890428	(27100761)	C	L2	LINE/L2	(3334)	85	23	1349710
2172	10.0	3.6	0.0	chr15	74905423	74905712	(27085477)	C	AluSx1	SINE/Alu	(11)	301	1	1349731
420	30.8	1.6	6.3	chr15	75176799	75177007	(26814182)	C	MIRc	SINE/MIR	(78)	190	1	1350345
1520	17.4	9.4	0.4	chr15	75177134	75177403	(26813786)	C	AluJr	SINE/Alu	(15)	297	1	1350346
13	11.6	3.6	0.0	chr15	75579312	75579339	(26411850)	+	G-rich	Low_complexity	1	29	(0)	1351123
216	30.3	1.3	0.0	chr15	75842893	75842968	(26148221)	C	L2a	LINE/L2	(676)	2743	2667	1351618
12	34.4	2.6	1.2	chr15	75843554	75843631	(26147558)	+	(CGGCCC)n	Simple_repeat	1	80	(0)	1351619
18	12.5	0.0	2.7	chr15	76206907	76206945	(25784244)	+	(TTTGTTT)n	Simple_repeat	1	37	(0)	1352188
431	28.7	7.4	9.5	chr15	76313642	76313945	(25677244)	+	LTR88b	LTR/Gypsy?	197	493	(344)	1352371
378	28.2	21.8	2.7	chr15	77072154	77072525	(24918664)	C	L2a	LINE/L2	(0)	3426	2964	1353490
12	31.1	1.8	0.0	chr15	77819965	77820019	(24171170)	+	(CTCTCC)n	Simple_repeat	1	56	(0)	1354732
568	29.7	1.1	0.0	chr15	78035655	78035839	(23955350)	+	L1ME4b	LINE/L1	366	552	(340)	1355073
250	29.9	20.5	1.0	chr15	78149002	78149099	(23842090)	+	L2a	LINE/L2	3285	3406	(20)	1355307
451	32.2	5.6	0.0	chr15	78150174	78150325	(23840864)	C	MIR3	SINE/MIR	(18)	190	30	1355316
2076	10.9	0.0	0.3	chr15	78418564	78418882	(23572307)	C	AluSx1	SINE/Alu	(0)	312	1	1355851
16	9.6	0.0	0.0	chr15	78438919	78438941	(23552248)	+	(A)n	Simple_repeat	1	23	(0)	1355903
382	20.5	22.7	3.6	chr15	78874971	78875218	(23115971)	+	Charlie4a	DNA/hAT-Charlie	191	499	(9)	1356792
2044	9.4	0.3	5.8	chr15	78875491	78875799	(23115390)	+	AluSx1	SINE/Alu	5	296	(16)	1356793
314	26.1	10.7	0.0	chr15	80747474	80747565	(21243624)	+	L4_A_Mam	LINE/RTE-X	225	327	(4663)	1360039
6520	13.1	3.9	0.1	chr15	80772743	80773766	(21217423)	+	Tigger2b_Pri	DNA/TcMar-Tigger	5	1068	(0)	1360089
1368	13.6	0.5	0.0	chr15	80884914	80885126	(21106063)	C	L1PA10	LINE/L1	(5)	6163	5950	1360285
811	27.5	4.5	1.9	chr15	81498376	81498754	(20492435)	+	L2a	LINE/L2	2854	3240	(186)	1361374
339	25.5	10.5	2.7	chr15	81950771	81950919	(20040270)	+	Charlie18a	DNA/hAT-Charlie	68	229	(113)	1362087
494	31.7	11.2	0.5	chr15	81950920	81951103	(20040086)	+	MIRb	SINE/MIR	42	247	(21)	1362088
22	14.2	0.0	0.0	chr15	82045632	82045670	(19945519)	+	(CCG)n	Simple_repeat	1	39	(0)	1362234
12	4.2	0.0	10.0	chr15	82047140	82047169	(19944020)	+	(CGCCC)n	Simple_repeat	1	30	(0)	1362238
341	14.3	0.0	1.8	chr15	83067477	83067533	(18923656)	C	MER5A	DNA/hAT-Charlie	(75)	114	59	1363979
401	25.5	16.5	5.8	chr15	83448181	83448438	(18542751)	C	L2b	LINE/L2	(73)	3314	3024	1364648
49	0.0	0.0	0.0	chr15	84571275	84571316	(17419873)	+	(GT)n	Simple_repeat	1	42	(0)	1366185
23	23.6	4.7	3.6	chr15	88255788	88255893	(13735296)	+	G-rich	Low_complexity	1	111	(0)	1372056
469	24.4	7.0	9.6	chr15	88614741	88614864	(13376325)	+	MER5B	DNA/hAT-Charlie	7	124	(54)	1372685
1587	21.4	9.2	6.4	chr15	89254220	89254556	(12736633)	+	L1MC4	LINE/L1	6738	7077	(965)	1373918
47	0.0	0.0	0.0	chr15	89389119	89389158	(12602031)	+	(GT)n	Simple_repeat	1	40	(0)	1374128
13	11.2	6.7	0.0	chr15	89441357	89441386	(12549803)	+	G-rich	Low_complexity	1	32	(0)	1374216
12	15.7	7.3	5.1	chr15	89441421	89441475	(12549714)	+	(GGTCAG)n	Simple_repeat	1	59	(0)	1374217
575	28.2	6.5	3.5	chr15	89898376	89898629	(12092560)	C	MER103C	DNA/hAT-Charlie	(0)	297	36	1375109
242	22.2	3.6	0.0	chr15	89913142	89913195	(12077994)	C	L4_A_Mam	LINE/RTE-X	(929)	4061	4006	1375133
30	17.3	4.6	0.0	chr15	90001395	90001459	(11989730)	+	GA-rich	Low_complexity	1	68	(0)	1375387
19	20.4	3.5	1.7	chr15	90001459	90001516	(11989673)	+	(GCGG)n	Simple_repeat	1	60	(0)	1375388
27	16.9	1.2	7.1	chr15	90001460	90001478	(11989711)	+	G-rich	Low_complexity	1	85	(0)	1375389
265	33.2	6.6	2.3	chr15	90106709	90106924	(11884265)	C	L2	LINE/L2	(723)	2696	2471	1375610
214	33.7	0.0	6.7	chr15	90207320	90207424	(11783765)	C	L3	LINE/CR1	(1348)	2751	2654	1375895
310	28.3	6.5	3.7	chr15	90207514	90207659	(11783530)	C	MIRc	SINE/MIR	(62)	146	2	1375896
1529	21.4	2.6	1.6	chr15	90861352	90861726	(11129463)	+	Charlie29a	DNA/hAT-Charlie	166	544	(175)	1377266
983	7.9	0.0	5.8	chr15	90955578	90955716	(11035473)	+	FLAM_C	SINE/Alu	3	133	(10)	1377406
284	26.3	18.9	0.0	chr15	90955774	90955872	(11035317)	+	L2c	LINE/L2	3266	3387	(0)	1377407
12	21.7	0.0	4.9	chr15	90994724	90994764	(10996425)	+	(TGGCC)n	Simple_repeat	1	41	(0)	1377487
215	30.1	11.6	8.2	chr15	91021613	91021927	(10969262)	+	L2c	LINE/L2	3029	3355	(32)	1377542
71	27.5	0.8	3.9	chr15	96331043	96331299	(5659890)	+	(GGC)n	Simple_repeat	1	259	(0)	1385727
478	25.9	3.0	4.7	chr15	98775307	98775476	(3215713)	+	MER5B	DNA/hAT-Charlie	12	178	(0)	1389152
561	23.9	7.4	0.6	chr15	98779385	98779548	(3211641)	C	MIR	SINE/MIR	(10)	252	77	1389158
391	28.6	5.1	3.1	chr15	99486862	99487052	(2504137)	C	MamGypLTR2c	LTR/Gypsy	(0)	1068	874	1390191
2009	11.8	0.0	0.7	chr15	101293952	101294255	(696934)	+	AluSp	SINE/Alu	1	302	(11)	1392605
244	26.5	8.4	0.0	chr15	101295783	101295880	(695309)	C	L1ME3	LINE/L1	(19)	6154	6048	1392606
1889	25.1	8.9	3.5	chr15	101295903	101296655	(694534)	C	L1ME3	LINE/L1	(167)	5995	5168	1392606
1342	13.7	4.4	6.0	chr16	97259	97491	(90240854)	C	AluJb	SINE/Alu	(16)	296	68	1394165
14	10.8	6.5	0.0	chr16	185404	185434	(90152911)	+	G-rich	Low_complexity	1	33	(0)	1394320
11	24.0	4.5	0.0	chr16	186023	186066	(90152279)	+	(ACGGAC)n	Simple_repeat	1	46	(0)	1394321
13	25.8	4.7	4.5	chr16	636269	636353	(89701992)	+	(CCGCGG)n	Simple_repeat	1	89	(0)	1395036
17	10.8	7.5	0.0	chr16	1048671	1048710	(89289635)	+	G-rich	Low_complexity	1	43	(0)	1395442
1850	19.0	6.1	5.9	chr16	1056155	1056612	(89281733)	C	LTR1E	LTR/ERV1	(0)	804	346	1395450
13	23.0	3.6	3.5	chr16	1199805	1199860	(89138485)	+	(TGCCCCT)n	Simple_repeat	1	58	(0)	1395584
35	32.2	2.2	3.2	chr16	1200036	1200220	(89138125)	+	(TGACCC)n	Simple_repeat	1	189	(0)	1395585
15	19.4	2.4	0.0	chr16	1722269	1722309	(88616036)	+	(CTGCCTC)n	Simple_repeat	1	42	(0)	1396314
274	34.4	8.6	0.8	chr16	1960842	1960970	(88377375)	+	MIRb	SINE/MIR	120	259	(9)	1396719
547	17.9	20.9	2.6	chr16	2205007	2205161	(88133184)	+	MER53	DNA/hAT	3	193	(0)	1397036
2133	5.5	0.7	10.9	chr16	2269110	2269439	(88068906)	C	AluSx3	SINE/Alu	(15)	296	1	1397132
188	29.3	10.7	0.0	chr16	2470755	2470829	(87867516)	C	MIRb	SINE/MIR	(165)	103	20	1397489
232	37.6	6.4	1.9	chr16	2774816	2775024	(87563321)	+	MIRb	SINE/MIR	28	246	(22)	1397900
426	15.7	0.0	0.0	chr16	3152609	3152678	(87185667)	C	tRNA-Pro-CCY	tRNA	(4)	71	2	1398602
15	20.2	2.0	4.0	chr16	3188533	3188581	(87149764)	+	G-rich	Low_complexity	1	50	(0)	1398694
2421	6.3	1.0	0.3	chr16	3263367	3263666	(87074679)	C	AluSx4	SINE/Alu	(8)	302	1	1398853
204	27.9	9.0	0.0	chr16	3263872	3263932	(87074413)	+	MIRc	SINE/MIR	82	148	(120)	1398854
217	31.4	14.5	5.0	chr16	3264843	3265003	(87073342)	C	L2a	LINE/L2	(1)	3425	3208	1398855
1734	14.6	5.3	2.7	chr16	4217253	4217546	(86120799)	C	AluJo	SINE/Alu	(6)	306	5	1400689
317	37.9	0.8	0.0	chr16	4217584	4217715	(86120630)	+	MIRc	SINE/MIR	68	200	(68)	1400690
315	30.7	16.7	0.0	chr16	8862478	8862796	(81475549)	C	L2a	LINE/L2	(129)	3297	2915	1409996
1879	9.9	6.3	2.2	chr16	8884803	8885075	(81453270)	+	AluSz	SINE/Alu	1	285	(27)	1410062
15	7.8	0.0	6.5	chr16	9091355	9091385	(81246960)	+	(CTC)n	Simple_repeat	1	31	(0)	1410574
1481	22.3	12.1	1.8	chr16	11390626	11391119	(78947226)	+	MER68	LTR/ERVL	12	563	(0)	1415566
306	34.9	4.7	2.1	chr16	11405291	11405569	(78932776)	C	L2c	LINE/L2	(2)	3385	3018	1415596
345	22.7	6.0	6.8	chr16	19886270	19886387	(70451958)	+	L2a	LINE/L2	3304	3420	(6)	1434582
14	21.4	4.6	4.4	chr16	20869033	20869097	(69469248)	+	G-rich	Low_complexity	1	68	(0)	1436629
780	13.1	3.0	1.5	chr16	21300547	21300678	(69037667)	+	LTR57	LTR/ERVL	270	403	(8)	1437613
401	11.8	4.2	0.0	chr16	21300682	21300749	(69037596)	C	LTR41B	LTR/ERVL	(581)	177	107	1437614
15	23.1	1.9	3.6	chr16	21599621	21599674	(68738671)	+	(GGC)n	Simple_repeat	1	55	(0)	1438246
975	27.1	16.1	3.7	chr16	22006873	22007647	(68330698)	+	L2a	LINE/L2	2507	3419	(7)	1439103
12	29.2	4.8	0.0	chr16	22374339	22374400	(67963945)	+	(CCCTCCG)n	Simple_repeat	1	65	(0)	1439921
1967	14.1	3.2	1.3	chr16	22727706	22728015	(67610330)	+	Tigger3a	DNA/TcMar-Tigger	1	316	(32)	1440698
543	27.4	11.6	1.0	chr16	22728037	22728259	(67610086)	C	L2a	LINE/L2	(333)	3093	2844	1440699
46	7.6	0.0	0.0	chr16	23409065	23409121	(66929224)	+	(GT)n	Simple_repeat	1	57	(0)	1442203
277	26.7	17.8	2.7	chr16	24538807	24538991	(65799354)	C	MIR	SINE/MIR	(17)	245	27	1444970
249	18.5	1.8	0.0	chr16	24538994	24539047	(65799298)	+	MIRb	SINE/MIR	199	253	(15)	1444969
2253	10.4	0.3	0.0	chr16	25110961	25111269	(65227076)	C	AluSx1	SINE/Alu	(2)	310	1	1446225
1627	15.3	5.5	1.3	chr16	25148833	25149129	(65189216)	C	LTR35	LTR/ERV1	(22)	586	276	1446304
28	27.9	0.0	0.0	chr16	29815725	29815797	(60522548)	+	GA-rich	Low_complexity	1	73	(0)	1456621
13	27.2	3.1	3.0	chr16	29816950	29817014	(60521331)	+	GA-rich	Low_complexity	1	67	(0)	1456622
13	16.8	0.0	5.4	chr16	29899618	29899654	(60438691)	+	GA-rich	Low_complexity	1	37	(0)	1456816
12	25.5	3.8	1.8	chr16	29926074	29926126	(60412219)	+	(GCGCCCT)n	Simple_repeat	1	55	(0)	1456879
241	36.5	10.1	1.2	chr16	29943960	29944266	(60394079)	C	L2c	LINE/L2	(609)	2810	2471	1456923
293	33.0	12.7	3.3	chr16	29992341	29992553	(60345792)	C	MLT1K	LTR/ERVL-MaLR	(64)	531	296	1457031
183	25.5	0.0	2.1	chr16	29995016	29995063	(60343282)	+	L2b	LINE/L2	3328	3374	(1)	1457034
295	30.2	12.1	3.6	chr16	30053643	30053838	(60284507)	C	L2b	LINE/L2	(213)	3162	2948	1457167
17	22.0	1.8	3.5	chr16	30064328	30064383	(60273962)	+	G-rich	Low_complexity	1	57	(0)	1457196
229	33.3	18.4	0.0	chr16	30178643	30178810	(60159535)	C	MIRb	SINE/MIR	(35)	233	28	1457472
24	20.8	0.0	1.8	chr16	30335132	30335188	(60003157)	+	GA-rich	Low_complexity	1	57	(0)	1457788
16	19.9	0.0	0.0	chr16	30335313	30335347	(60002998)	+	GA-rich	Low_complexity	1	35	(0)	1457789
11	19.2	9.1	1.7	chr16	30400368	30400422	(59937923)	+	(CCCGGACA)n	Simple_repeat	1	60	(0)	1457932
13	22.4	0.0	4.4	chr16	30650822	30650866	(59687479)	+	G-rich	Low_complexity	1	45	(0)	1458569
798	30.9	5.9	5.5	chr16	31006393	31006830	(59331515)	C	L2a	LINE/L2	(0)	3426	2987	1459373
1649	15.4	0.0	2.3	chr16	31051984	31052243	(59286102)	C	AluJr4	SINE/Alu	(54)	258	5	1459498
242	28.7	10.5	1.1	chr16	31052246	31052340	(59286005)	C	MLT1J	LTR/ERVL-MaLR	(153)	359	255	1459496
655	31.6	4.5	0.0	chr16	31052361	31052572	(59285773)	C	MLT1J	LTR/ERVL-MaLR	(290)	222	1	1459496
221	26.4	5.3	4.0	chr16	46883797	46883871	(43454474)	C	MIRb	SINE/MIR	(73)	195	120	1466255
41	10.3	1.3	3.8	chr16	49700885	49700963	(40637382)	+	G-rich	Low_complexity	1	80	(0)	1470954
483	27.3	6.2	0.0	chr16	50021603	50021752	(40316593)	C	MamTip3	DNA/hAT-Tip100	(119)	381	222	1471625
183	27.7	4.4	5.8	chr16	50021795	50021863	(40316482)	+	L2b	LINE/L2	3286	3353	(22)	1471626
401	23.5	1.3	8.6	chr16	50359777	50359939	(39978406)	C	L2c	LINE/L2	(215)	3172	3022	1472303
14	18.3	2.7	0.0	chr16	53099565	53099601	(37238744)	+	(TCCTTCC)n	Simple_repeat	1	38	(0)	1477231
958	23.6	23.4	3.2	chr16	53651202	53651831	(36686514)	+	L2a	LINE/L2	2565	3379	(47)	1478203
643	25.6	14.1	8.9	chr16	54244158	54244585	(36093760)	C	LTR33	LTR/ERVL	(47)	468	15	1479148
24	23.2	7.4	2.3	chr16	54286378	54286498	(36051847)	+	(CGCTCCT)n	Simple_repeat	1	130	(0)	1479233
38	18.6	4.7	1.8	chr16	56425421	56425448	(33912897)	+	(CGCTGC)n	Simple_repeat	1	40	(72)	1483025
17	13.9	0.0	0.0	chr16	56425449	56425480	(33912865)	+	(GCCGG)n	Simple_repeat	1	32	(0)	1483026
38	18.6	4.7	1.8	chr16	56425481	56425527	(33912818)	+	(CGCTGC)n	Simple_repeat	41	112	(0)	1483025
13	9.8	0.0	0.0	chr16	57186403	57186424	(33151921)	+	(CGC)n	Simple_repeat	1	22	(0)	1484533
523	27.2	9.0	0.8	chr16	57349484	57349739	(32988606)	+	L1ME4b	LINE/L1	369	647	(245)	1484883
84	20.2	3.2	1.8	chr16	57349765	57349980	(32988365)	+	(CTTC)n	Simple_repeat	1	223	(0)	1484884
13	10.7	6.7	0.0	chr16	58027757	58027786	(32310559)	+	(CCTGC)n	Simple_repeat	1	32	(0)	1486287
544	27.2	10.4	4.9	chr16	66460775	66461018	(23877327)	+	MIR	SINE/MIR	1	259	(3)	1499783
15	17.2	2.4	2.4	chr16	66552529	66552569	(23785776)	+	(GCGCGT)n	Simple_repeat	1	42	(0)	1499952
32	32.4	1.4	2.7	chr16	66604020	66604163	(23734182)	+	(TG)n	Simple_repeat	1	146	(0)	1500045
1781	8.1	0.8	0.0	chr16	66876453	66876687	(23461658)	+	AluY	SINE/Alu	62	298	(13)	1500604
1970	10.6	6.3	3.5	chr16	66876688	66876840	(23461505)	C	THE1D	LTR/ERVL-MaLR	(220)	161	1	1500603
191	31.8	9.3	1.1	chr16	67175751	67175839	(23162506)	C	MIR3	SINE/MIR	(67)	141	45	1501219
78	0.0	0.0	0.0	chr16	67176055	67176120	(23162225)	+	(GT)n	Simple_repeat	1	66	(0)	1501220
185	30.7	10.6	2.9	chr16	67400482	67400585	(22937760)	+	MIRb	SINE/MIR	41	153	(115)	1501566
196	23.4	18.1	1.3	chr16	68265393	68265470	(22072875)	C	L2b	LINE/L2	(10)	3365	3272	1503256
15	8.7	0.0	0.0	chr16	68704586	68704610	(21633735)	+	(AGGG)n	Simple_repeat	1	25	(0)	1504108
223	30.7	11.9	3.5	chr16	68704723	68704773	(21633572)	C	MIRb	SINE/MIR	(89)	179	130	1504109
16	31.3	1.4	1.4	chr16	69106518	69106590	(21231755)	+	(CCCCCTC)n	Simple_repeat	1	74	(0)	1505104
341	27.7	8.7	0.7	chr16	69476936	69477084	(20861261)	+	MLT1L	LTR/ERVL-MaLR	143	304	(306)	1505882
744	19.2	10.0	1.5	chr16	69477104	69477304	(20861041)	+	MLT1L	LTR/ERVL-MaLR	389	608	(2)	1505882
14	5.0	0.0	0.0	chr16	69565978	69565998	(20772347)	+	(GCG)n	Simple_repeat	1	21	(0)	1506105
17	19.3	2.0	3.9	chr16	70686106	70686156	(19652189)	+	GA-rich	Low_complexity	1	52	(0)	1508508
636	2.7	0.0	0.0	chr16	70779036	70779109	(19559236)	C	tRNA-Gly-GGY	tRNA	(0)	74	1	1508603
835	13.8	0.0	0.0	chr16	72093009	72093124	(18245221)	C	FLAM_A	SINE/Alu	(16)	126	11	1510969
18	20.7	4.2	4.0	chr16	74606844	74606915	(15731430)	+	(TGCTGA)n	Simple_repeat	1	75	(0)	1515037
13	18.9	2.8	0.0	chr16	74607177	74607212	(15731133)	+	(GCCCC)n	Simple_repeat	1	37	(0)	1515038
441	27.5	17.9	0.0	chr16	75305483	75305675	(15032670)	+	MIR	SINE/MIR	13	247	(15)	1516502
330	20.2	5.0	7.3	chr16	75420944	75421036	(14917309)	+	L1ME4b	LINE/L1	65	157	(735)	1516750
2186	13.9	0.6	0.3	chr16	75421037	75421376	(14916969)	+	MER61A	LTR/ERV1	1	341	(0)	1516751
16	15.3	2.0	6.0	chr16	77212374	77212422	(13125923)	+	G-rich	Low_complexity	1	50	(0)	1519452
277	25.6	2.8	2.8	chr16	80569868	80570008	(9768337)	C	MER112	DNA/hAT-Charlie	(23)	238	98	1525524
12	23.1	2.0	4.0	chr16	81445623	81445671	(8892674)	+	G-rich	Low_complexity	1	50	(0)	1527290
875	24.7	2.3	4.8	chr16	84616767	84617034	(5721311)	C	L1ME3	LINE/L1	(30)	6132	5872	1533212
276	31.6	8.6	0.9	chr16	84633647	84633860	(5704485)	C	LTR33	LTR/ERVL	(6)	509	278	1533255
240	33.3	11.3	0.0	chr16	84839358	84839498	(5498847)	+	MIRb	SINE/MIR	65	223	(45)	1533673
417	25.4	2.0	0.0	chr16	85174541	85174655	(5163690)	C	L2a	LINE/L2	(3)	3423	3262	1534328
362	33.5	4.5	10.5	chr16	85227142	85227602	(5110743)	C	L2c	LINE/L2	(18)	3408	2963	1534437
723	31.4	6.4	3.8	chr16	85227795	85228329	(5110016)	C	L2b	LINE/L2	(0)	3375	2830	1534438
306	30.5	7.9	9.4	chr16	85351047	85351137	(4987208)	C	MIR	SINE/MIR	(118)	144	60	1534690
359	26.4	0.0	0.0	chr16	85351155	85351241	(4987104)	C	MLT1J1	LTR/ERVL-MaLR	(354)	90	4	1534692
991	20.3	2.3	4.1	chr16	85461162	85461382	(4876963)	C	MER20	DNA/hAT-Charlie	(2)	217	1	1534885
297	27.0	4.7	0.0	chr16	85522552	85522660	(4815685)	C	MIR1_Amn	SINE/MIR	(65)	203	79	1535002
18	8.8	2.5	4.9	chr16	85555105	85555144	(4783201)	+	(GCC)n	Simple_repeat	1	41	(0)	1535054
12	14.9	8.1	0.0	chr16	86510202	86510238	(3828107)	+	(CGGCCT)n	Simple_repeat	1	40	(0)	1536781
14	29.0	3.2	1.6	chr16	86510251	86510312	(3828033)	+	G-rich	Low_complexity	1	64	(0)	1536782
14	13.0	5.9	0.0	chr16	86510351	86510384	(3827961)	+	G-rich	Low_complexity	1	36	(0)	1536782
1082	36.0	0.8	0.0	chr16	88518219	88521140	(1817205)	+	(GGTG)n	Simple_repeat	2	2947	(0)	1540059
1340	28.1	11.4	1.8	chr16	89084457	89085055	(1253290)	C	Charlie1a	DNA/hAT-Charlie	(412)	1043	380	1540778
1535	24.1	8.1	0.8	chr16	89327638	89328570	(1009775)	+	L1MD2	LINE/L1	4978	5879	(480)	1541082
260	38.0	1.8	0.0	chr16	89374503	89374664	(963681)	+	MER105	DNA/hAT-Charlie	20	184	(19)	1541159
719	11.3	0.9	0.8	chr16	89817057	89817172	(521173)	+	FLAM_C	SINE/Alu	6	117	(16)	1541909
541	17.5	11.0	0.0	chr16	89817898	89817994	(520351)	+	AluYc3	SINE/Alu	177	285	(15)	1541911
423	27.3	3.2	0.0	chr16	89817996	89818116	(520229)	+	L1MEf	LINE/L1	998	1122	(4923)	1541912
189	30.8	3.0	0.0	chr17	950176	950240	(82307201)	C	OldhAT1	DNA/hAT-Ac	(2327)	521	455	1546099
280	30.8	10.9	3.4	chr17	1267599	1267776	(81989665)	+	L2b	LINE/L2	2933	3125	(250)	1546736
2255	9.5	0.0	0.0	chr17	1267778	1268071	(81989370)	+	AluSx1	SINE/Alu	1	294	(18)	1546737
1252	26.2	6.8	4.5	chr17	1463282	1463812	(81793629)	+	MLT1K	LTR/ERVL-MaLR	34	577	(18)	1547193
18	12.2	0.0	0.0	chr17	1999681	1999707	(81257734)	+	(CA)n	Simple_repeat	1	27	(0)	1548263
13	12.5	0.0	0.0	chr17	1999865	1999890	(81257551)	+	(CCTCT)n	Simple_repeat	1	26	(0)	1548264
12	23.9	6.0	0.0	chr17	2023849	2023898	(81233543)	+	(GCCGCA)n	Simple_repeat	1	53	(0)	1548314
13	29.8	0.0	0.0	chr17	2392861	2392905	(80864536)	+	G-rich	Low_complexity	1	45	(0)	1549013
17	19.6	0.0	5.8	chr17	2400961	2401012	(80856429)	+	(CTCC)n	Simple_repeat	1	52	(0)	1549024
3187	12.7	4.5	1.8	chr17	2484986	2485499	(80771942)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1549207
874	24.9	10.3	4.4	chr17	2923711	2924167	(80333274)	C	HAL1b	LINE/L1	(27)	2394	1908	1550261
468	33.6	8.5	0.9	chr17	3888400	3888627	(79368814)	+	MIR	SINE/MIR	16	262	(0)	1551942
244	31.4	17.0	1.1	chr17	3890666	3890852	(79366589)	+	L2b	LINE/L2	2940	3162	(213)	1551945
1291	28.2	3.6	2.1	chr17	3891167	3891601	(79365840)	C	L2a	LINE/L2	(13)	3413	2972	1551947
12	23.1	0.0	4.5	chr17	3893402	3893445	(79363996)	+	(GGCGA)n	Simple_repeat	1	44	(0)	1551951
476	25.7	13.4	0.4	chr17	3935302	3935528	(79321913)	+	MLT1K	LTR/ERVL-MaLR	1	261	(334)	1552034
14	8.2	3.9	0.0	chr17	4142924	4142949	(79114492)	+	(GCC)n	Simple_repeat	1	27	(0)	1552422
313	31.4	9.9	1.7	chr17	4161183	4161302	(79096139)	C	L2b	LINE/L2	(2)	3373	3243	1552457
250	27.0	18.5	0.6	chr17	4318472	4318635	(78938806)	+	MLT1K	LTR/ERVL-MaLR	383	582	(13)	1552749
386	25.0	13.5	2.2	chr17	4332429	4332612	(78924829)	+	L2a	LINE/L2	2756	2963	(456)	1552778
374	29.2	22.6	2.2	chr17	4332699	4333059	(78924382)	+	L2a	LINE/L2	2971	3426	(0)	1552778
589	7.0	0.0	0.0	chr17	4709598	4709668	(78547773)	+	AluSz6	SINE/Alu	242	312	(0)	1553586
189	33.5	10.3	7.3	chr17	4709672	4709916	(78547525)	+	L2b	LINE/L2	3095	3347	(28)	1553587
200	26.1	11.9	0.0	chr17	4719940	4720058	(78537383)	C	L2a	LINE/L2	(457)	2962	2828	1553601
287	32.9	10.3	2.8	chr17	4730608	4730857	(78526584)	+	L2	LINE/L2	2795	3065	(354)	1553635
1913	9.8	1.8	0.0	chr17	4730911	4731186	(78526255)	+	AluSx1	SINE/Alu	15	295	(17)	1553636
1422	30.6	5.8	6.4	chr17	4753762	4754180	(78503261)	+	L2	LINE/L2	212	609	(2810)	1553690
1684	15.7	6.9	2.0	chr17	7135632	7135873	(76121568)	+	L1MB3	LINE/L1	5815	6059	(124)	1558303
2480	6.8	0.0	1.3	chr17	7135874	7136182	(76121259)	+	AluSc	SINE/Alu	1	305	(4)	1558304
28	4.2	0.0	8.6	chr17	7239501	7239558	(76017883)	+	(CCT)n	Simple_repeat	1	58	(0)	1558484
13	16.3	2.1	6.1	chr17	7239559	7239572	(76017869)	+	(GCC)n	Simple_repeat	1	15	(0)	1558485
11	22.0	2.2	4.3	chr17	7573782	7573827	(75683614)	+	(GCGAGG)n	Simple_repeat	1	47	(0)	1559097
41	33.8	1.1	2.1	chr17	7614701	7614891	(75642550)	+	(GCC)n	Simple_repeat	1	193	(0)	1559153
18	4.5	0.0	0.0	chr17	7838448	7838470	(75418971)	+	(CA)n	Simple_repeat	1	23	(0)	1559623
436	25.2	3.7	1.5	chr17	7865185	7865317	(75392124)	C	MIR	SINE/MIR	(62)	200	65	1559652
630	20.0	37.0	1.1	chr17	7865398	7865751	(75391690)	C	MLT1G1	LTR/ERVL-MaLR	(70)	509	3	1559653
22	12.4	11.1	1.4	chr17	8123338	8123400	(75134041)	+	(TC)n	Simple_repeat	1	70	(0)	1560135
15	20.4	7.7	3.6	chr17	8123401	8123415	(75134026)	+	(TCTCG)n	Simple_repeat	1	84	(0)	1560136
239	36.3	0.8	1.6	chr17	8185825	8185950	(75071491)	+	MER5B	DNA/hAT-Charlie	54	178	(0)	1560262
15	31.5	0.0	1.6	chr17	8435787	8435850	(74821591)	+	(CCCGC)n	Simple_repeat	1	64	(0)	1560832
630	24.4	7.5	0.5	chr17	9569169	9569353	(73688088)	C	L2a	LINE/L2	(38)	3388	3190	1562960
233	33.6	11.8	0.8	chr17	14297844	14297963	(68959478)	C	MIR3	SINE/MIR	(6)	202	68	1571197
13	19.6	0.0	0.0	chr17	14301327	14301356	(68956085)	+	(GCC)n	Simple_repeat	1	30	(0)	1571199
199	25.4	2.7	5.3	chr17	17041315	17041389	(66216052)	+	L2a	LINE/L2	3124	3196	(230)	1576012
5150	13.9	6.7	1.8	chr17	17300814	17301774	(65955667)	+	MER52D	LTR/ERV1	564	1575	(548)	1576393
17	17.5	2.6	0.0	chr17	17681398	17681436	(65576005)	+	(CCGC)n	Simple_repeat	1	40	(0)	1577150
349	32.3	13.2	3.4	chr17	17685600	17686175	(65571266)	+	L2b	LINE/L2	2713	3364	(11)	1577158
306	16.7	1.0	12.7	chr17	17710824	17710933	(65546508)	C	MIR3	SINE/MIR	(86)	122	26	1577209
19	24.3	2.8	2.7	chr17	17752330	17752400	(65505041)	+	(GGCGG)n	Simple_repeat	1	73	(0)	1577284
21	31.9	1.5	0.0	chr17	17783970	17784035	(65473406)	+	(CT)n	Simple_repeat	1	67	(0)	1577348
210	32.3	0.0	2.9	chr17	17784059	17784160	(65473281)	C	UCON71_Crp	Unknown	(0)	277	179	1577349
230	33.6	8.3	1.8	chr17	17826163	17826274	(65431167)	+	L3	LINE/CR1	3884	4003	(96)	1577414
261	28.4	14.3	3.0	chr17	17828105	17828307	(65429134)	+	L2c	LINE/L2	2911	3140	(247)	1577419
279	29.9	4.0	11.1	chr17	17837347	17837508	(65419933)	+	MIRb	SINE/MIR	37	186	(82)	1577446
324	26.4	11.7	0.0	chr17	17838596	17838701	(65418740)	+	MIRb	SINE/MIR	37	156	(112)	1577448
202	13.9	0.0	0.0	chr17	17849371	17849406	(65408035)	+	L2b	LINE/L2	3313	3348	(27)	1577457
188	27.6	2.6	6.2	chr17	17850271	17850351	(65407090)	C	MamRTE1	LINE/RTE-BovB	(3165)	647	570	1577459
196	30.7	4.3	0.0	chr17	18038688	18038775	(65218666)	+	MIR3	SINE/MIR	75	166	(42)	1577826
34	13.2	0.0	0.0	chr17	18184331	18184388	(65073053)	+	(GCCGCC)n	Simple_repeat	1	58	(0)	1578112
239	33.4	4.3	3.3	chr17	18224981	18225198	(65032243)	C	L2b	LINE/L2	(257)	3130	2919	1578192
232	30.8	8.4	5.5	chr17	18855557	18855776	(64401665)	C	L2a	LINE/L2	(14)	3412	3186	1579267
283	24.5	11.7	9.0	chr17	18855953	18856118	(64401323)	C	MLT1K	LTR/ERVL-MaLR	(24)	571	401	1579268
253	25.6	10.6	7.0	chr17	18856137	18856308	(64401133)	C	MLT1K	LTR/ERVL-MaLR	(266)	329	151	1579268
15	15.4	2.6	2.6	chr17	18967338	18967375	(64290066)	+	GA-rich	Low_complexity	1	39	(0)	1579524
190	28.0	2.1	8.8	chr17	18967452	18967553	(64289888)	C	L2	LINE/L2	(348)	3071	2977	1579525
2016	0.5	0.0	0.0	chr17	19063920	19064136	(64193305)	C	U3	snRNA	(0)	217	1	1579728
1631	12.8	2.2	2.5	chr17	19111856	19112129	(64145312)	+	AluSx	SINE/Alu	1	273	(39)	1579880
2548	12.2	8.4	2.7	chr17	19646653	19647241	(63610200)	C	MER4-int	LTR/ERV1	(5912)	686	1	1581021
481	26.5	8.9	2.9	chr17	19647784	19648024	(63609417)	C	L2a	LINE/L2	(1123)	2296	2040	1581017
368	20.4	4.8	1.9	chr17	19649313	19649469	(63607972)	C	L1M5	LINE/L1	(809)	5385	5219	1581023
2522	8.5	0.7	0.7	chr17	20921888	20922192	(62335249)	+	AluSp	SINE/Alu	2	306	(7)	1583338
15	13.3	0.0	5.4	chr17	20922202	20922238	(62335203)	+	A-rich	Low_complexity	1	37	(0)	1583339
496	24.6	2.2	0.7	chr17	20922239	20922373	(62335068)	+	MLT1-int	LTR/ERVL-MaLR	599	735	(636)	1583336
482	16.7	14.7	1.8	chr17	21098909	21099073	(62158368)	+	L1ME3	LINE/L1	5853	6042	(120)	1583654
774	24.7	17.6	0.8	chr17	21361374	21361874	(61895567)	+	L2a	LINE/L2	2801	3424	(2)	1584147
13	12.2	8.3	0.0	chr17	28371488	28371523	(54885918)	+	G-rich	Low_complexity	1	39	(0)	1588527
667	27.1	3.5	2.5	chr17	28599570	28599766	(54657675)	C	MIR	SINE/MIR	(2)	260	62	1588986
11	29.8	1.6	3.2	chr17	28812417	28812477	(54444964)	+	(CCCCAGC)n	Simple_repeat	1	62	(0)	1589377
1311	18.8	11.0	2.9	chr17	28899537	28899711	(54357730)	+	L2a	LINE/L2	2862	3052	(367)	1589585
477	30.9	10.0	3.1	chr17	28901943	28902451	(54354990)	+	L2b	LINE/L2	2661	3214	(161)	1589591
16	21.9	3.3	0.0	chr17	28949300	28949355	(54308086)	+	G-rich	Low_complexity	1	57	(0)	1589654
275	33.6	0.0	0.9	chr17	29042850	29042963	(54214478)	+	Eulor8	DNA/TcMar?	381	493	(69)	1589828
12	8.8	4.2	0.0	chr17	29099908	29099931	(54157510)	+	(GAG)n	Simple_repeat	1	25	(0)	1589906
12	17.9	0.0	5.6	chr17	29100005	29100040	(54157401)	+	A-rich	Low_complexity	1	36	(0)	1589907
220	29.6	0.0	0.7	chr17	29177036	29177115	(54080326)	+	MIRc	SINE/MIR	61	141	(127)	1590033
325	30.3	10.9	3.7	chr17	29592177	29592337	(53665104)	C	MIRb	SINE/MIR	(73)	195	22	1590974
17	26.2	4.4	0.0	chr17	29930067	29930134	(53327307)	+	(GGAGCGG)n	Simple_repeat	1	71	(0)	1591636
12	7.7	3.2	6.2	chr17	30231900	30231930	(53025511)	+	GA-rich	Low_complexity	1	32	(0)	1592199
1297	16.1	18.4	1.8	chr17	31007826	31008104	(52249337)	C	MER44A	DNA/TcMar-Tigger	(3)	336	1	1593820
21	6.7	0.0	0.0	chr17	31095479	31095510	(52161931)	+	(GGAAG)n	Simple_repeat	1	32	(0)	1593995
12	30.2	7.3	0.0	chr17	31095511	31095557	(52161884)	+	GA-rich	Low_complexity	4	88	(0)	1593996
325	14.4	24.0	2.8	chr17	31385680	31385822	(51871619)	C	L2c	LINE/L2	(178)	3209	3027	1594466
257	11.1	0.0	0.0	chr17	31385874	31385909	(51871532)	+	MIR	SINE/MIR	216	251	(11)	1594467
17	13.7	0.0	0.0	chr17	31549981	31550012	(51707429)	+	(CGGGGC)n	Simple_repeat	1	32	(0)	1594798
646	0.0	0.0	0.0	chr17	31550074	31550145	(51707296)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1594799
21	24.8	0.0	1.7	chr17	31937083	31937140	(51320301)	+	(CCTTC)n	Simple_repeat	1	58	(0)	1595692
269	34.3	4.8	0.0	chr17	32262107	32262205	(50995236)	+	L2b	LINE/L2	3265	3368	(7)	1596429
308	32.3	8.1	6.5	chr17	32298401	32298632	(50958809)	+	MIRc	SINE/MIR	2	237	(31)	1596494
12	17.5	3.1	0.0	chr17	32298929	32298960	(50958481)	+	(GAGGT)n	Simple_repeat	1	33	(0)	1596495
16	0.0	0.0	0.0	chr17	32299047	32299063	(50958378)	+	(T)n	Simple_repeat	1	17	(0)	1596496
306	20.7	4.4	4.6	chr17	32498351	32498466	(50758975)	+	MIRb	SINE/MIR	12	126	(104)	1596922
554	27.2	6.6	2.8	chr17	33942342	33942532	(49314909)	C	MIR3	SINE/MIR	(10)	198	2	1599604
304	30.4	7.0	2.1	chr17	34612463	34612647	(48644794)	+	MIR3	SINE/MIR	23	229	(39)	1600739
702	25.6	10.6	0.5	chr17	34982003	34982214	(48275227)	C	MIR	SINE/MIR	(0)	262	27	1601464
1573	15.6	0.7	4.3	chr17	35142541	35142842	(48114599)	C	AluJr	SINE/Alu	(21)	291	1	1601791
652	20.2	3.5	5.1	chr17	35243779	35243955	(48013486)	C	PrimLTR79	LTR/ERV1	(1)	502	329	1601983
263	36.7	1.4	0.7	chr17	35257313	35257452	(47999989)	+	MamRep605	LTR?	670	810	(39)	1602004
13	8.7	4.0	0.0	chr17	35373878	35373902	(47883539)	+	(CTAT)n	Simple_repeat	1	26	(0)	1602150
18	23.6	0.0	0.0	chr17	35587383	35587428	(47670013)	+	(CCCGCC)n	Simple_repeat	1	46	(0)	1602448
2410	8.9	0.0	2.2	chr17	38845087	38845284	(44412157)	C	AluSg4	SINE/Alu	(0)	310	135	1608714
2406	6.7	0.0	1.0	chr17	38845285	38845584	(44411857)	C	AluY	SINE/Alu	(14)	297	1	1608715
641	2.7	0.0	0.0	chr17	39154490	39154562	(44102879)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609433
224	19.2	1.4	6.4	chr17	39232470	39232547	(44024894)	C	L2c	LINE/L2	(297)	3090	3017	1609586
21	14.4	0.0	0.0	chr17	40059874	40059912	(43197529)	+	(GGGA)n	Simple_repeat	1	39	(0)	1611283
96	24.6	2.0	0.0	chr17	40069072	40069316	(43188125)	+	(CTCT)n	Simple_repeat	1	250	(0)	1611300
278	32.4	3.6	0.9	chr17	40113907	40114015	(43143426)	C	MIR3	SINE/MIR	(1)	207	96	1611369
16	13.7	0.0	2.9	chr17	40121986	40122019	(43135422)	+	(GGC)n	Simple_repeat	1	34	(0)	1611391
51	19.4	2.6	0.8	chr17	40124316	40124432	(43133009)	+	(TCTC)n	Simple_repeat	1	120	(0)	1611397
216	27.0	0.0	3.1	chr17	40307917	40307981	(42949460)	C	MIR1_Amn	SINE/MIR	(79)	151	89	1611812
12	7.0	5.9	5.6	chr17	40344045	40344078	(42913363)	+	(CCTG)n	Simple_repeat	1	36	(0)	1611857
691	26.0	5.3	0.1	chr17	40490705	40490921	(42766520)	+	MIRb	SINE/MIR	9	248	(14)	1612157
195	33.7	4.5	1.1	chr17	40499491	40499577	(42757864)	C	MIR3	SINE/MIR	(84)	124	35	1612181
13	13.2	6.7	4.2	chr17	41777682	41777726	(41479715)	+	(AGGCTG)n	Simple_repeat	1	48	(0)	1614274
399	22.6	2.0	2.8	chr17	41793587	41793709	(41463732)	C	MIR3	SINE/MIR	(132)	136	14	1614307
239	28.3	21.0	0.0	chr17	41965982	41966154	(41291287)	+	MIRb	SINE/MIR	35	253	(15)	1614686
1857	11.3	6.3	0.3	chr17	41970399	41970680	(41286761)	C	AluSx1	SINE/Alu	(12)	300	1	1614690
19	26.6	4.0	3.8	chr17	42276228	42276328	(40981113)	+	(GCTC)n	Simple_repeat	1	105	(0)	1615285
430	28.7	0.8	1.6	chr17	42536759	42536882	(40720559)	+	MIRb	SINE/MIR	67	189	(79)	1615846
13	20.2	0.0	2.7	chr17	42659145	42659181	(40598260)	+	(CTCCC)n	Simple_repeat	1	37	(0)	1616103
13	33.2	0.0	1.8	chr17	42676646	42676701	(40580740)	+	GA-rich	Low_complexity	1	56	(0)	1616131
393	26.7	4.8	11.3	chr17	42678934	42679136	(40578305)	C	L3	LINE/CR1	(25)	4074	3886	1616136
12	19.7	0.0	0.0	chr17	42679606	42679634	(40577807)	+	(GGC)n	Simple_repeat	1	29	(0)	1616139
2171	8.0	0.0	3.5	chr17	42824490	42824803	(40432638)	+	AluSx	SINE/Alu	4	306	(6)	1616424
2601	5.1	0.3	0.6	chr17	42964834	42965144	(40292297)	+	AluSx1	SINE/Alu	2	311	(1)	1616765
14	7.8	0.0	6.5	chr17	43022419	43022449	(40234992)	+	(GGGCG)n	Simple_repeat	1	31	(0)	1616899
384	34.8	4.7	0.6	chr17	43033559	43033720	(40223721)	+	MIRc	SINE/MIR	18	186	(82)	1616918
371	30.8	10.1	2.4	chr17	43368998	43369416	(39888025)	C	L2	LINE/L2	(422)	2997	2543	1617637
381	30.2	6.5	11.8	chr17	43388857	43389213	(39868228)	+	L2c	LINE/L2	3050	3386	(1)	1617686
188	20.9	2.3	0.0	chr17	43562811	43562853	(39694588)	C	L3b	LINE/CR1	(216)	5016	4973	1618109
24	23.2	7.1	0.9	chr17	43833195	43833205	(39424236)	+	(GCG)n	Simple_repeat	1	102	(0)	1618679
20	27.4	1.2	3.5	chr17	43833206	43833289	(39424152)	+	G-rich	Low_complexity	1	85	(0)	1618680
13	33.2	0.0	0.0	chr17	44087101	44087153	(39170288)	+	(ACAC)n	Simple_repeat	1	53	(0)	1619200
893	15.9	4.3	0.6	chr17	44185849	44186005	(39071436)	C	AluJr	SINE/Alu	(13)	299	137	1619417
2371	5.0	0.7	1.3	chr17	44186038	44186335	(39071106)	+	AluSp	SINE/Alu	1	296	(17)	1619418
346	32.4	0.0	0.9	chr17	44361704	44361812	(38895629)	C	MIRb	SINE/MIR	(58)	210	103	1619782
1951	14.8	0.3	2.6	chr17	44493055	44493359	(38764082)	C	AluSx	SINE/Alu	(13)	299	2	1620057
12	13.9	9.8	3.6	chr17	44599684	44599734	(38657707)	+	GA-rich	Low_complexity	1	56	(0)	1620294
2025	15.1	1.3	0.0	chr17	44603631	44603929	(38653512)	C	AluJr	SINE/Alu	(9)	303	1	1620302
476	18.6	1.0	2.9	chr17	44690379	44690483	(38566958)	C	MIRb	SINE/MIR	(36)	232	130	1620502
2080	15.6	0.0	0.0	chr17	44923766	44924073	(38333368)	+	AluSz	SINE/Alu	1	308	(4)	1620995
472	27.6	2.8	2.2	chr17	44924118	44924295	(38333146)	C	MamRep434	DNA/TcMar-Tigger	(178)	248	70	1620996
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
322	17.9	0.0	0.0	chr17	45176236	45176291	(38081150)	C	MIRc	SINE/MIR	(130)	138	83	1621493
15	23.3	0.0	0.0	chr17	45228978	45229017	(38028424)	+	GA-rich	Low_complexity	1	40	(0)	1621646
14	19.5	0.0	6.4	chr17	46979291	46979337	(36278104)	+	(CCGCC)n	Simple_repeat	1	47	(0)	1625087
184	35.8	4.0	0.0	chr17	46979486	46979580	(36277861)	C	L3b	LINE/CR1	(152)	5080	4982	1625088
6357	26.6	6.9	7.0	chr17	47065564	47068369	(36189072)	C	HERVIP10FH-int	LTR/ERV1	(259)	4843	2041	1625273
191	30.8	0.0	6.0	chr17	47275960	47276042	(35981399)	+	X9_LINE	LINE/L1	820	897	(39)	1625712
25	23.2	1.2	3.7	chr17	47649892	47649972	(35607469)	+	(TCCC)n	Simple_repeat	1	82	(0)	1626488
504	31.3	0.0	0.7	chr17	47873476	47873610	(35383831)	+	MIR3	SINE/MIR	10	143	(65)	1626866
12	19.4	0.0	5.1	chr17	47987679	47987717	(35269724)	+	(CTCC)n	Simple_repeat	1	39	(0)	1627065
229	29.3	0.0	0.0	chr17	48024509	48024566	(35232875)	+	MIRb	SINE/MIR	120	177	(91)	1627148
253	35.5	6.1	2.7	chr17	48145761	48145870	(35111571)	C	LFSINE_Vert	SINE/tRNA	(103)	356	243	1627384
509	22.6	2.4	6.8	chr17	48145939	48146071	(35111370)	+	Charlie4z	DNA/hAT-Charlie	21	147	(20)	1627385
397	31.8	10.5	0.7	chr17	48495683	48495837	(34761604)	+	MIR3	SINE/MIR	32	203	(5)	1627986
674	15.6	9.3	2.0	chr17	48495840	48495989	(34761452)	+	L1MA10	LINE/L1	6169	6330	(4)	1627987
17	13.3	4.7	2.2	chr17	48603475	48603517	(34653924)	+	(TTTTC)n	Simple_repeat	1	45	(0)	1628132
13	16.1	5.7	0.0	chr17	48612063	48612097	(34645344)	+	(GCCTG)n	Simple_repeat	1	37	(0)	1628142
16	20.9	1.1	10.1	chr17	48625316	48625427	(34632014)	+	(CCGGCCC)n	Simple_repeat	1	101	(0)	1628155
13	28.3	1.8	1.7	chr17	48647332	48647388	(34610053)	+	G-rich	Low_complexity	1	58	(0)	1628177
94	7.2	4.1	0.0	chr17	48728854	48728999	(34528442)	+	(TC)n	Simple_repeat	1	152	(0)	1628367
12	24.0	4.5	0.0	chr17	48729085	48729128	(34528313)	+	GA-rich	Low_complexity	1	46	(0)	1628368
16	14.2	0.0	0.0	chr17	48972489	48972519	(34284922)	+	(CACCCC)n	Simple_repeat	1	31	(0)	1628950
290	26.3	2.6	6.6	chr17	49260777	49260898	(33996543)	C	MIR3	SINE/MIR	(1)	207	91	1629560
13	12.0	3.7	0.0	chr17	49361350	49361376	(33896065)	+	GA-rich	Low_complexity	1	28	(0)	1629783
12	7.2	2.9	8.3	chr17	49362226	49362260	(33895181)	+	GA-rich	Low_complexity	1	36	(0)	1629784
16	16.4	4.9	0.0	chr17	49362245	49362285	(33895156)	+	(GCGC)n	Simple_repeat	1	43	(0)	1629785
12	28.7	0.0	2.1	chr17	49362266	49362313	(33895128)	+	(CGCCCC)n	Simple_repeat	1	48	(0)	1629786
309	33.1	4.3	8.2	chr17	49565351	49565788	(33691653)	C	L1M4b	LINE/L1	(886)	6120	5701	1630169
628	27.2	14.4	2.9	chr17	49565951	49566367	(33691074)	C	L2c	LINE/L2	(0)	3387	2915	1630170
671	28.3	5.5	5.8	chr17	49757631	49757956	(33499485)	C	Tigger19b	DNA/TcMar-Tigger	(17)	533	209	1630511
16	22.0	2.0	2.0	chr17	50151187	50151236	(33106205)	+	(CCCTC)n	Simple_repeat	1	51	(0)	1631242
212	28.6	20.0	0.0	chr17	50178605	50178716	(33078725)	+	MIRb	SINE/MIR	50	189	(79)	1631288
1701	30.6	17.2	2.2	chr17	50282966	50284664	(32972777)	+	L2	LINE/L2	846	2853	(566)	1631458
222	34.6	12.2	3.4	chr17	50480366	50480574	(32776867)	C	L2c	LINE/L2	(111)	3276	3047	1631868
231	29.3	11.9	0.8	chr17	50480614	50480747	(32776694)	C	L2c	LINE/L2	(460)	2959	2809	1631868
828	11.8	0.0	0.8	chr17	50695087	50695205	(32562236)	+	AluJr	SINE/Alu	1	118	(194)	1632260
357	25.7	4.1	8.1	chr17	50905752	50905914	(32351527)	+	MIR3	SINE/MIR	5	176	(92)	1632702
489	25.6	12.2	3.4	chr17	51121167	51121344	(32136097)	C	MIRc	SINE/MIR	(18)	250	55	1633163
13	25.2	2.7	6.5	chr17	55421817	55421891	(27835550)	+	(GGTCG)n	Simple_repeat	1	77	(0)	1639592
28	16.9	4.7	3.4	chr17	55421919	55422003	(27835438)	+	(CCTCCCG)n	Simple_repeat	1	89	(0)	1639593
18	14.9	0.0	2.6	chr17	56593716	56593754	(26663687)	+	(CGC)n	Simple_repeat	1	39	(0)	1641537
200	23.1	4.4	4.4	chr17	57098175	57098242	(26159199)	+	UCON71_Crp	Unknown	179	246	(31)	1642644
14	17.2	2.4	2.4	chr17	57131184	57131224	(26126217)	+	(CCACCCC)n	Simple_repeat	1	42	(0)	1642708
295	21.0	11.5	1.0	chr17	57131265	57131365	(26126076)	+	MER5A1	DNA/hAT-Charlie	52	164	(2)	1642709
600	31.0	7.9	2.7	chr17	57948588	57948885	(25308556)	C	L3b	LINE/CR1	(14)	5218	4904	1644180
15	19.1	5.3	3.3	chr17	58084143	58084199	(25173242)	+	(GGCC)n	Simple_repeat	1	60	(0)	1644418
210	35.4	9.9	0.8	chr17	58219485	58219612	(25037829)	C	MIR1_Amn	SINE/MIR	(87)	143	3	1644658
240	41.8	5.9	1.3	chr17	58387991	58388218	(24869223)	C	MamRTE1	LINE/RTE-BovB	(2798)	1014	776	1644916
335	32.5	5.6	6.6	chr17	59619923	59620103	(23637338)	+	L1MDb	LINE/L1	582	760	(5649)	1647644
18	19.3	6.4	0.0	chr17	59964739	59964785	(23292656)	+	(GC)n	Simple_repeat	1	50	(0)	1648327
597	30.8	10.1	4.1	chr17	60077024	60077413	(23180028)	C	L2c	LINE/L2	(25)	3362	2947	1648529
270	30.9	16.7	0.0	chr17	60077448	60077667	(23179774)	C	L1ME3G	LINE/L1	(70)	854	591	1648530
25	22.6	2.8	6.4	chr17	60392137	60392243	(22865198)	+	(CTC)n	Simple_repeat	1	110	(0)	1649144
185	32.6	9.5	2.3	chr17	61150188	61150275	(22107166)	+	LFSINE_Vert	SINE/tRNA	341	435	(24)	1650581
18	10.7	0.0	0.0	chr17	61240105	61240134	(22017307)	+	(CAG)n	Simple_repeat	1	30	(0)	1650727
488	28.5	18.7	0.5	chr17	61240135	61240345	(22017096)	C	MIRb	SINE/MIR	(7)	261	11	1650728
355	32.1	8.2	1.4	chr17	61504789	61504892	(21752549)	+	L2	LINE/L2	2479	2594	(825)	1651153
312	31.4	4.1	1.4	chr17	61505018	61505159	(21752282)	+	LTR85b	LTR/Gypsy?	1	146	(638)	1651155
28	22.5	1.5	8.2	chr17	62627530	62627662	(20629779)	+	(CCCCCT)n	Simple_repeat	1	135	(0)	1653391
13	15.9	0.0	0.0	chr17	63475211	63475238	(19782203)	+	(CTCTT)n	Simple_repeat	1	28	(0)	1654783
12	24.4	3.2	4.6	chr17	63476878	63476940	(19780501)	+	(CCCAGC)n	Simple_repeat	1	65	(0)	1654786
369	32.4	12.7	1.8	chr17	63550930	63551146	(19706295)	C	MIRb	SINE/MIR	(22)	246	3	1654904
11	14.8	4.9	4.7	chr17	63741930	63741970	(19515471)	+	(GGCCGC)n	Simple_repeat	1	43	(0)	1655272
2499	6.4	0.0	0.6	chr17	63742648	63742959	(19514482)	+	AluY	SINE/Alu	1	310	(1)	1655273
14	7.0	0.0	10.5	chr17	63826976	63827013	(19430428)	+	(TTCCAC)n	Simple_repeat	1	38	(0)	1655423
2391	6.7	1.0	0.3	chr17	63843361	63843659	(19413782)	+	AluSq2	SINE/Alu	9	309	(4)	1655442
602	35.8	12.6	4.2	chr17	64694224	64694629	(18562812)	+	L3b	LINE/CR1	3356	3737	(362)	1657110
9929	19.7	8.0	2.3	chr17	65022034	65023974	(18233467)	+	Cheshire	DNA/hAT-Charlie	1	2031	(389)	1657788
394	18.2	9.3	0.0	chr17	65071863	65071950	(18185491)	C	MER3	DNA/hAT-Charlie	(47)	162	66	1657896
344	34.7	2.9	6.7	chr17	65175471	65175649	(18081792)	+	L2b	LINE/L2	3194	3365	(10)	1658140
16	25.7	3.2	1.6	chr17	65175685	65175746	(18081695)	+	(CCTTTC)n	Simple_repeat	1	64	(0)	1658141
578	15.1	12.6	15.7	chr17	65175796	65175992	(18081449)	+	MER53	DNA/hAT	4	193	(0)	1658142
12	21.5	4.4	2.1	chr17	65561628	65561672	(17695769)	+	(CGCCG)n	Simple_repeat	1	47	(0)	1658890
279	32.2	13.5	5.2	chr17	65586705	65587276	(17670165)	C	L2b	LINE/L2	(40)	3335	2708	1658947
2210	11.7	0.3	0.0	chr17	66347942	66348241	(16909200)	C	AluSx	SINE/Alu	(11)	301	1	1660138
271	34.2	12.2	2.9	chr17	66348568	66348841	(16908600)	C	Tigger19a	DNA/TcMar-Tigger	(16)	307	5	1660139
385	31.4	12.1	0.6	chr17	66509020	66509134	(16748307)	C	MLT1H2	LTR/ERVL-MaLR	(290)	199	63	1660382
23	14.6	4.7	3.0	chr17	67245234	67245297	(16012144)	+	(CCTCCCG)n	Simple_repeat	1	67	(0)	1661589
14	28.1	3.0	1.5	chr17	67378017	67378082	(15879359)	+	(GCGCGCC)n	Simple_repeat	1	68	(0)	1661912
12	15.8	0.0	3.3	chr17	67378210	67378239	(15879202)	+	(CCGGC)n	Simple_repeat	1	30	(0)	1661913
550	35.3	12.7	3.9	chr17	68089884	68090289	(15167152)	C	L3b	LINE/CR1	(447)	4785	4409	1663510
17	14.0	0.0	0.0	chr17	69417784	69417815	(13839626)	+	(GGAG)n	Simple_repeat	1	32	(0)	1665728
17	3.3	2.9	5.6	chr17	70171247	70171281	(13086160)	+	(TCCCCC)n	Simple_repeat	1	36	(0)	1666899
14	18.9	2.8	0.0	chr17	72030586	72030621	(11226820)	+	G-rich	Low_complexity	1	37	(0)	1669700
22	3.8	0.0	0.0	chr17	72125896	72125922	(11131519)	+	(TG)n	Simple_repeat	1	27	(0)	1669842
256	30.9	3.6	0.0	chr17	72597739	72597819	(10659622)	+	MIR	SINE/MIR	171	254	(8)	1670663
362	20.8	0.0	0.0	chr17	72597923	72597994	(10659447)	C	MER3	DNA/hAT-Charlie	(137)	72	1	1670664
428	14.0	17.7	0.0	chr17	73092080	73092186	(10165255)	+	MER5A1	DNA/hAT-Charlie	1	130	(36)	1671604
566	20.3	3.7	6.0	chr17	73284052	73284219	(9973222)	+	MER53	DNA/hAT	29	192	(1)	1671997
206	26.4	7.1	9.0	chr17	73376908	73377007	(9880434)	+	MIR3	SINE/MIR	49	146	(62)	1672191
659	26.5	7.3	6.0	chr17	73480837	73481206	(9776235)	+	LTR85c	LTR/Gypsy?	235	725	(98)	1672407
864	21.2	0.0	11.7	chr17	73588005	73588090	(9669351)	+	MER5A	DNA/hAT-Charlie	1	75	(114)	1672602
2270	9.2	0.3	4.6	chr17	73588091	73588416	(9669025)	+	AluSp	SINE/Alu	1	312	(1)	1672603
18	14.9	0.0	7.7	chr17	74203455	74203506	(9053935)	+	GA-rich	Low_complexity	1	52	(0)	1673684
2208	9.8	5.1	0.0	chr17	74989643	74989937	(8267504)	C	AluSx	SINE/Alu	(0)	312	2	1675132
2103	11.4	0.3	0.0	chr17	75008097	75008395	(8249046)	+	AluSz6	SINE/Alu	1	300	(12)	1675172
452	25.9	10.1	10.5	chr17	75031638	75031756	(8225685)	+	MIR	SINE/MIR	14	146	(116)	1675209
2401	8.4	0.3	0.0	chr17	75312337	75312645	(7944796)	C	AluSp	SINE/Alu	(3)	310	1	1675844
1550	15.1	7.4	1.1	chr17	75312780	75313058	(7944383)	C	AluJb	SINE/Alu	(14)	298	1	1675845
682	26.5	9.2	9.0	chr17	75406183	75406593	(7850848)	C	L2c	LINE/L2	(46)	3341	2930	1676045
16	9.1	5.4	2.6	chr17	75765228	75765264	(7492177)	+	(CCCGC)n	Simple_repeat	1	39	(0)	1676725
27	0.0	0.0	0.0	chr17	75809085	75809110	(7448331)	+	(GGCGGG)n	Simple_repeat	1	26	(0)	1676818
14	18.3	2.7	0.0	chr17	75979188	75979224	(7278217)	+	(CCCGG)n	Simple_repeat	1	38	(0)	1677148
328	20.8	2.5	1.3	chr17	76268230	76268307	(6989134)	C	MIR3	SINE/MIR	(48)	160	82	1677703
2422	9.2	0.0	0.3	chr17	76268732	76269034	(6988407)	C	AluSx1	SINE/Alu	(10)	302	1	1677705
12	28.6	0.0	5.0	chr17	76353621	76353680	(6903761)	+	G-rich	Low_complexity	1	60	(0)	1677879
187	29.8	7.7	3.5	chr17	76422464	76422550	(6834891)	C	L2b	LINE/L2	(2)	3373	3283	1677991
427	24.0	12.1	5.9	chr17	76422638	76422890	(6834551)	+	L2a	LINE/L2	3092	3356	(31)	1677992
973	16.1	4.7	0.0	chr17	76465853	76466014	(6791427)	C	AluJb	SINE/Alu	(7)	305	136	1678089
12	13.0	4.9	9.4	chr17	76467980	76468040	(6789401)	+	(CCTCCCCA)n	Simple_repeat	1	64	(0)	1678093
1060	17.8	1.9	5.3	chr17	76500154	76500378	(6757063)	C	MER20	DNA/hAT-Charlie	(0)	219	3	1678146
12	23.7	2.5	0.0	chr17	76540905	76540944	(6716497)	+	(TCCCCT)n	Simple_repeat	1	41	(0)	1678238
242	29.9	1.3	0.0	chr17	76969746	76969822	(6287619)	C	Tigger4	DNA/TcMar-Tigger	(620)	2111	2034	1679133
12	18.1	0.0	3.0	chr17	77374837	77374869	(5882572)	+	GA-rich	Low_complexity	1	33	(0)	1679960
245	26.1	1.5	0.0	chr17	77433064	77433128	(5824313)	C	MLT1L	LTR/ERVL-MaLR	(10)	600	535	1680039
2372	5.7	0.0	0.0	chr17	77467984	77468297	(5789144)	+	AluYm1	SINE/Alu	1	311	(0)	1680093
642	20.9	10.5	2.1	chr17	77694583	77694881	(5562560)	+	LTR16B	LTR/ERVL	142	478	(2)	1680481
59	20.2	3.5	5.2	chr17	77735900	77736102	(5521339)	+	G-rich	Low_complexity	1	210	(0)	1680552
346	29.4	7.7	8.6	chr17	77736121	77736317	(5521124)	+	MIR3	SINE/MIR	8	202	(6)	1680553
608	16.3	5.1	0.8	chr17	78197475	78197604	(5059837)	+	MLT1A1	LTR/ERVL-MaLR	273	408	(0)	1681376
286	33.9	5.0	1.1	chr17	78197651	78197841	(5059600)	C	L2	LINE/L2	(646)	2773	2575	1681377
20	26.2	4.4	4.2	chr17	78353008	78353058	(4904383)	+	(GCGGCC)n	Simple_repeat	23	118	(0)	1681715
14	14.2	3.2	0.0	chr17	78353182	78353212	(4904229)	+	(CGCC)n	Simple_repeat	1	32	(0)	1681717
334	29.9	11.5	8.4	chr17	79658912	79659280	(3598161)	C	MLT1I	LTR/ERVL-MaLR	(11)	400	19	1683716
17	35.2	0.0	0.0	chr17	79797777	79797804	(3459637)	+	(CCCCCGC)n	Simple_repeat	2	75	(0)	1683953
377	23.1	30.5	2.6	chr17	81491897	81492090	(1765351)	+	MLT1F1	LTR/ERVL-MaLR	310	569	(0)	1686301
11	14.8	4.9	4.7	chr17	82273465	82273505	(983936)	+	(CTCCGG)n	Simple_repeat	1	43	(0)	1687397
4947	18.2	2.2	2.3	chr17	82289835	82290658	(966783)	C	MER49	LTR/ERV1	(0)	923	96	1687430
1221	27.2	11.8	3.4	chr17	82366895	82367746	(889695)	C	L1MEg	LINE/L1	(4367)	2670	1738	1687532
1685	7.4	2.8	0.0	chr17	82367747	82367988	(889453)	C	LTR71B	LTR/ERV1	(0)	610	362	1687533
39	4.5	0.0	0.0	chr17	82424826	82424871	(832570)	+	(AGAAGGTTAG)n	Simple_repeat	1	46	(0)	1687616
14	12.6	0.0	7.5	chr18	3448257	3448296	(76924989)	+	(CCTCCTC)n	Simple_repeat	1	40	(0)	1694436
14	18.7	5.0	4.8	chr18	3450196	3450255	(76923030)	+	GA-rich	Low_complexity	1	63	(0)	1694439
211	23.2	2.8	4.2	chr18	5893012	5893083	(74480202)	+	L3b	LINE/CR1	4062	4132	(1100)	1697831
3264	4.6	9.9	0.0	chr18	9113534	9113950	(71259335)	+	LTR2	LTR/ERV1	1	463	(0)	1702488
390	28.8	47.0	2.0	chr18	9113951	9114170	(71259115)	C	LTR40b	LTR/ERVL	(191)	328	2	1702487
185	31.0	18.8	3.8	chr18	11849829	11850120	(68523165)	C	L2c	LINE/L2	(8)	3379	3034	1706451
1222	25.2	1.9	0.0	chr18	12408609	12408914	(67964371)	+	L1PB4	LINE/L1	5845	6156	(0)	1707391
2121	11.5	0.9	10.6	chr18	12679229	12679606	(67693679)	+	MER61A	LTR/ERV1	1	341	(0)	1707916
16	24.9	0.0	2.0	chr18	12944827	12944875	(67428410)	+	(CAG)n	Simple_repeat	1	49	(0)	1708425
328	24.3	10.5	4.9	chr18	12945036	12945178	(67428107)	+	LTR33A	LTR/ERVL	315	466	(54)	1708426
13	8.8	0.0	3.9	chr18	21991048	21991073	(58382212)	+	(AGGG)n	Simple_repeat	1	26	(0)	1713692
22	18.8	5.1	3.7	chr18	22169335	22169412	(58203873)	+	(CTCCC)n	Simple_repeat	1	82	(0)	1714086
182	22.0	2.0	2.0	chr18	23994680	23994730	(56378555)	+	OldhAT1	DNA/hAT-Ac	725	775	(2073)	1717172
15	0.0	0.0	0.0	chr18	23994740	23994758	(56378527)	+	(AGC)n	Simple_repeat	1	19	(0)	1717173
436	22.6	7.8	0.0	chr18	23994788	23994893	(56378392)	C	MER5B	DNA/hAT-Charlie	(14)	164	50	1717174
14	15.9	2.9	0.0	chr18	25350311	25350345	(55022940)	+	G-rich	Low_complexity	1	36	(0)	1719207
14	11.7	0.0	3.3	chr18	28178573	28178602	(52194683)	+	(TTGTT)n	Simple_repeat	1	30	(0)	1723421
223	31.9	4.1	2.1	chr18	28584942	28585037	(51788248)	C	MamSINE1	SINE/tRNA-RTE	(111)	179	82	1723924
14	23.1	2.1	2.1	chr18	31684330	31684376	(48688909)	+	GA-rich	Low_complexity	1	48	(0)	1728039
30	15.2	1.6	1.6	chr18	32770282	32770342	(47602943)	+	(GCT)n	Simple_repeat	1	62	(0)	1729864
17	32.4	2.9	0.0	chr18	33578113	33578181	(46795104)	+	(GC)n	Simple_repeat	1	71	(0)	1730902
14	11.1	0.0	6.1	chr18	34222908	34222940	(46150345)	+	(CCCT)n	Simple_repeat	1	33	(0)	1731665
513	25.2	3.7	0.0	chr18	35583179	35583333	(44789952)	+	MER5A1	DNA/hAT-Charlie	2	162	(4)	1733551
588	30.6	13.5	1.6	chr18	35610227	35610538	(44762747)	+	L2a	LINE/L2	3059	3413	(13)	1733582
1669	16.7	5.0	3.0	chr18	39800102	39800435	(40572850)	C	MER61A	LTR/ERV1	(0)	341	1	1739189
201	31.3	4.2	5.8	chr18	45627391	45627638	(34745647)	C	L2c	LINE/L2	(83)	3343	3050	1747202
1381	29.2	3.9	1.1	chr18	46324475	46324944	(34048341)	C	MLT1J	LTR/ERVL-MaLR	(28)	484	1	1748454
183	32.2	8.7	7.3	chr18	48172951	48173074	(32200211)	+	MIR3	SINE/MIR	70	195	(13)	1751459
15	22.0	2.0	2.0	chr18	48539845	48539893	(31833392)	+	G-rich	Low_complexity	1	50	(0)	1752079
1945	14.6	3.5	6.4	chr18	49252246	49252591	(31120694)	C	THE1D	LTR/ERVL-MaLR	(33)	348	1	1753180
526	23.9	3.2	0.2	chr18	49464510	49464642	(30908643)	+	MIRb	SINE/MIR	13	152	(56)	1753574
1755	16.3	1.7	1.0	chr18	49520617	49520910	(30852375)	C	AluJb	SINE/Alu	(15)	297	2	1753705
23	22.3	0.0	1.7	chr18	50281424	50281482	(30091803)	+	(CCT)n	Simple_repeat	1	59	(0)	1754897
11	17.3	0.0	5.6	chr18	50878852	50878887	(29494398)	+	(CTCCAC)n	Simple_repeat	1	36	(0)	1755929
204	35.0	0.0	0.0	chr18	55413197	55413276	(24960009)	C	Tigger19a	DNA/TcMar-Tigger	(38)	285	206	1762635
11	13.2	5.7	2.7	chr18	58603526	58603560	(21769725)	+	(CTTCCC)n	Simple_repeat	1	37	(0)	1767515
1987	11.9	2.3	0.0	chr18	58634868	58635162	(21738123)	C	L1PA11	LINE/L1	(2)	6172	5871	1767576
2280	10.7	12.4	1.1	chr18	59056196	59056574	(21316711)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1768366
1576	27.0	13.1	1.3	chr18	59079429	59080033	(21293252)	C	ERVL-E-int	LTR/ERVL	(1648)	4019	3333	1768413
317	29.5	1.3	0.0	chr18	59847171	59847248	(20526037)	+	MamRep4096	DNA/hAT-Tip100	325	403	(23)	1769618
13	24.3	0.0	8.1	chr18	62715590	62715651	(17657634)	+	(CCG)n	Simple_repeat	1	62	(0)	1773932
1596	14.5	10.3	0.8	chr18	70286172	70286433	(10086852)	C	AluJr	SINE/Alu	(22)	290	1	1784344
23	22.1	0.0	0.0	chr18	79394058	79394110	(979175)	+	GA-rich	Low_complexity	1	53	(0)	1795468
240	27.8	9.1	0.0	chr19	290274	290363	(58327253)	+	MIR	SINE/MIR	154	252	(10)	1796696
352	23.1	4.4	0.9	chr19	550342	550450	(58067166)	C	L1MB7	LINE/L1	(0)	6184	6072	1797123
999	17.8	9.8	1.5	chr19	571083	571344	(58046272)	+	LTR10B	LTR/ERV1	16	301	(204)	1797172
1132	13.0	12.8	0.4	chr19	571377	571615	(58046001)	C	HERVIP10B3-int	LTR/ERV1	(7313)	290	18	1797168
14	27.5	0.0	4.8	chr19	917233	917294	(57700322)	+	G-rich	Low_complexity	1	62	(0)	1797887
2320	9.9	0.3	0.0	chr19	924389	924691	(57692925)	C	AluSx	SINE/Alu	(8)	304	1	1797901
213	31.2	0.0	0.0	chr19	925015	925078	(57692538)	+	MIR	SINE/MIR	108	171	(91)	1797902
244	35.8	3.4	0.9	chr19	925385	925516	(57692100)	C	MIRc	SINE/MIR	(106)	162	25	1797903
284	25.3	3.2	0.0	chr19	977263	977353	(57640263)	+	L2b	LINE/L2	3017	3110	(265)	1798014
194	27.9	9.7	6.0	chr19	1039302	1039450	(57578166)	+	L2c	LINE/L2	3002	3156	(231)	1798125
2316	7.2	0.0	6.3	chr19	1240660	1240991	(57376625)	C	AluSx1	SINE/Alu	(1)	311	1	1798450
575	14.7	1.6	10.1	chr19	1241392	1241549	(57376067)	C	FLAM_C	SINE/Alu	(90)	212	7	1798452
12	22.4	1.9	5.7	chr19	1248809	1248860	(57368756)	+	(GCCCC)n	Simple_repeat	1	53	(0)	1798465
12	13.9	6.2	0.0	chr19	1249461	1249492	(57368124)	+	(GCCCGC)n	Simple_repeat	1	34	(0)	1798466
14	4.1	3.7	3.6	chr19	1253269	1253295	(57364321)	+	(CCCT)n	Simple_repeat	1	28	(0)	1798468
12	31.3	0.0	0.0	chr19	1257139	1257182	(57360434)	+	(GCA)n	Simple_repeat	1	44	(0)	1798471
241	18.1	10.8	5.7	chr19	1292406	1292493	(57325123)	C	L2b	LINE/L2	(1)	3374	3282	1798508
315	26.3	18.9	0.0	chr19	1292546	1292743	(57324873)	C	L2b	LINE/L2	(339)	3080	2837	1798508
13	22.0	4.1	2.0	chr19	1314389	1314437	(57303179)	+	G-rich	Low_complexity	1	51	(0)	1798551
1411	16.7	0.7	13.2	chr19	1314518	1314859	(57302757)	C	AluJb	SINE/Alu	(12)	300	2	1798552
249	29.3	0.0	0.0	chr19	1357944	1358001	(57259615)	C	Tigger19b	DNA/TcMar-Tigger	(332)	218	161	1798674
220	26.5	18.3	4.5	chr19	1450788	1450941	(57166675)	C	L2b	LINE/L2	(180)	3195	3016	1798803
211	35.7	0.0	0.0	chr19	1454123	1454206	(57163410)	+	MIRc	SINE/MIR	84	167	(101)	1798806
249	21.0	3.6	8.0	chr19	1747795	1747882	(56869734)	+	L2c	LINE/L2	3066	3149	(238)	1799452
19	4.3	0.0	0.0	chr19	1755184	1755207	(56862409)	+	(TG)n	Simple_repeat	1	24	(0)	1799459
221	29.2	6.2	2.4	chr19	1768175	1768420	(56849196)	C	L2a	LINE/L2	(214)	3212	2957	1799477
210	30.0	4.1	0.0	chr19	1768480	1768549	(56849067)	C	MIR3	SINE/MIR	(68)	140	68	1799478
1488	12.7	17.9	0.0	chr19	1814148	1814399	(56803217)	+	AluSz	SINE/Alu	2	308	(4)	1799568
12	19.8	2.3	4.4	chr19	1853415	1853458	(56764158)	+	(AGGCC)n	Simple_repeat	1	45	(0)	1799628
2034	6.8	8.3	0.0	chr19	1897324	1897588	(56720028)	C	AluY	SINE/Alu	(20)	291	3	1799708
2442	6.0	0.0	0.7	chr19	2029016	2029313	(56588303)	C	AluY	SINE/Alu	(15)	296	1	1799996
236	28.6	7.1	0.0	chr19	2162772	2162862	(56454754)	C	MIR1_Amn	SINE/MIR	(79)	151	54	1800267
998	5.2	0.0	0.0	chr19	2162915	2163048	(56454568)	+	LTR8	LTR/ERV1	1	134	(557)	1800268
488	16.8	7.0	2.5	chr19	2266869	2266990	(56350626)	+	MER20	DNA/hAT-Charlie	5	132	(87)	1800434
1892	11.0	2.9	7.6	chr19	2787052	2787198	(55830418)	C	AluSx1	SINE/Alu	(166)	146	1	1801658
186	28.6	11.6	1.2	chr19	2976687	2976771	(55640845)	+	L2b	LINE/L2	2978	3072	(303)	1802073
187	29.9	11.6	1.8	chr19	3003260	3003355	(55614261)	C	MIRc	SINE/MIR	(100)	168	60	1802144
15	21.2	0.0	4.3	chr19	3036342	3036388	(55581228)	+	(CTCC)n	Simple_repeat	1	47	(0)	1802227
191	30.0	0.0	0.0	chr19	3036691	3036740	(55580876)	+	MIR3	SINE/MIR	110	159	(49)	1802228
13	20.4	0.0	4.7	chr19	3046720	3046762	(55570854)	+	G-rich	Low_complexity	1	43	(0)	1802257
28	20.5	5.4	2.0	chr19	3971044	3971136	(54646480)	+	(GCC)n	Simple_repeat	1	98	(0)	1804459
345	9.1	14.4	0.0	chr19	4052850	4052926	(54564690)	+	L2a	LINE/L2	3031	3120	(306)	1804630
327	17.5	3.1	0.0	chr19	4052939	4053001	(54564615)	+	L2a	LINE/L2	3357	3421	(5)	1804630
267	25.6	3.5	0.0	chr19	4173320	4173409	(54444207)	C	MIR3	SINE/MIR	(53)	155	64	1804947
1426	19.9	10.1	3.9	chr19	5042528	5042872	(53574744)	C	MSTA	LTR/ERVL-MaLR	(35)	393	15	1807128
1534	17.6	0.4	4.0	chr19	5047012	5047284	(53570332)	+	AluJb	SINE/Alu	1	263	(49)	1807138
355	18.6	9.5	0.0	chr19	5309205	5309290	(53308326)	+	MIRc	SINE/MIR	53	147	(121)	1807621
13	0.0	0.0	0.0	chr19	5805941	5805957	(52811659)	+	(CGC)n	Simple_repeat	1	17	(0)	1808890
299	33.5	10.4	5.0	chr19	5968780	5969140	(52648476)	C	L2b	LINE/L2	(19)	3356	2974	1809185
1310	28.7	11.9	2.7	chr19	8396325	8397353	(50220263)	C	L2a	LINE/L2	(1)	3425	2263	1815209
304	31.3	10.6	5.1	chr19	8515257	8515589	(50102027)	C	L2a	LINE/L2	(264)	3162	2811	1815456
17	31.5	2.6	0.0	chr19	8609153	8609230	(50008386)	+	(TGTGTG)n	Simple_repeat	1	80	(0)	1815704
29	0.0	0.0	0.0	chr19	8609235	8609259	(50008357)	+	(TG)n	Simple_repeat	1	25	(0)	1815705
13	15.9	2.7	2.6	chr19	10404825	10404861	(48212755)	+	(TCCCCC)n	Simple_repeat	1	38	(0)	1819651
677	26.8	5.3	0.5	chr19	10690379	10690577	(47927039)	+	MER20	DNA/hAT-Charlie	3	211	(8)	1820428
13	17.0	0.0	5.4	chr19	11139033	11139069	(47478547)	+	G-rich	Low_complexity	1	37	(0)	1821544
710	26.2	4.5	0.0	chr19	11143436	11143626	(47473990)	+	MER20	DNA/hAT-Charlie	20	219	(0)	1821559
213	26.9	16.8	4.8	chr19	11156071	11156195	(47461421)	C	L2a	LINE/L2	(24)	3402	3260	1821597
14	16.7	2.9	0.0	chr19	11197889	11197922	(47419694)	+	G-rich	Low_complexity	1	35	(0)	1821708
236	26.9	0.0	0.0	chr19	11344712	11344763	(47272853)	+	MER91A	DNA/hAT-Tip100	1	52	(144)	1822104
304	22.9	0.0	0.0	chr19	11384508	11384568	(47233048)	+	MIRc	SINE/MIR	85	145	(123)	1822184
1503	14.5	6.8	7.3	chr19	11693948	11694290	(46923326)	+	THE1D	LTR/ERVL-MaLR	41	381	(0)	1822952
212	20.8	8.9	4.0	chr19	12730133	12730207	(45887409)	+	L2b	LINE/L2	3061	3139	(287)	1825094
363	23.2	5.3	3.4	chr19	12730254	12730381	(45887235)	+	L2b	LINE/L2	3266	3424	(2)	1825094
1163	13.5	4.2	5.0	chr19	12733412	12733630	(45883986)	C	MER20	DNA/hAT-Charlie	(0)	219	3	1825104
313	29.9	5.6	0.8	chr19	12733634	12733751	(45883865)	C	MIRb	SINE/MIR	(20)	248	125	1825105
245	27.9	0.0	1.6	chr19	13116869	13116930	(45500686)	C	MIRb	SINE/MIR	(93)	175	115	1825904
12	7.5	6.7	3.1	chr19	13163845	13163874	(45453742)	+	(GCCCT)n	Simple_repeat	1	32	(0)	1826010
869	14.6	0.5	11.9	chr19	13848584	13848801	(44768815)	C	MER53	DNA/hAT	(0)	193	1	1827949
877	15.6	0.7	0.7	chr19	13854420	13854560	(44763056)	C	AluSx	SINE/Alu	(171)	141	1	1827967
1678	18.3	0.3	2.7	chr19	13854561	13854721	(44762895)	C	AluJo	SINE/Alu	(18)	294	134	1827968
2041	4.7	8.2	0.0	chr19	13854722	13855007	(44762609)	C	AluY	SINE/Alu	(0)	311	1	1827969
1833	14.6	0.7	3.4	chr19	14002999	14003292	(44614324)	C	AluSz	SINE/Alu	(26)	286	1	1828306
12	29.7	1.8	1.8	chr19	14075209	14075263	(44542353)	+	(CCCGG)n	Simple_repeat	1	56	(0)	1828508
15	32.9	0.0	0.0	chr19	14090475	14090531	(44527085)	+	(CCC)n	Simple_repeat	1	57	(0)	1828548
18	0.0	0.0	0.0	chr19	14090582	14090601	(44527015)	+	(A)n	Simple_repeat	1	20	(0)	1828549
32	17.2	1.7	0.0	chr19	14090601	14090660	(44526956)	+	GA-rich	Low_complexity	1	61	(0)	1828550
15	21.8	0.0	0.0	chr19	14090671	14090707	(44526909)	+	(CACA)n	Simple_repeat	1	37	(0)	1828551
12	29.5	2.0	0.0	chr19	14249450	14249499	(44368117)	+	(CCCCCT)n	Simple_repeat	1	51	(0)	1828950
773	26.6	2.3	3.6	chr19	14519980	14520201	(44097415)	+	MIR	SINE/MIR	23	241	(21)	1829703
28	23.7	4.8	5.2	chr19	14690058	14690206	(43927410)	+	(GCGCG)n	Simple_repeat	1	148	(0)	1830169
213	23.2	7.9	5.8	chr19	15222997	15223083	(43394533)	+	L2c	LINE/L2	3108	3196	(191)	1831420
14	5.0	0.0	0.0	chr19	15223174	15223194	(43394422)	+	(ATGA)n	Simple_repeat	1	21	(0)	1831421
229	16.7	0.0	0.0	chr19	15223195	15223230	(43394386)	C	tRNA-Gly-GGG	tRNA	(38)	36	1	1831422
257	30.5	5.5	0.5	chr19	15556249	15556393	(43061223)	+	MIRb	SINE/MIR	36	187	(43)	1832094
265	29.1	18.0	1.2	chr19	16223610	16223849	(42393767)	C	L1MEf	LINE/L1	(6196)	351	63	1833420
767	31.2	7.5	0.9	chr19	16825339	16825687	(41791929)	+	L2b	LINE/L2	2612	2985	(434)	1834905
231	36.2	6.1	2.5	chr19	17333841	17334044	(41283572)	+	L2c	LINE/L2	2916	3127	(260)	1836047
659	26.1	10.0	1.0	chr19	17334054	17334254	(41283362)	C	MIR	SINE/MIR	(6)	256	36	1836048
2276	13.1	0.0	0.0	chr19	17412255	17412566	(41205050)	C	AluSz	SINE/Alu	(0)	312	1	1836271
990	27.7	6.2	10.1	chr19	17412653	17413217	(41204399)	C	LTR34	LTR/ERV1	(150)	549	40	1836272
289	27.4	13.1	1.7	chr19	17489425	17489539	(41128077)	C	MIRb	SINE/MIR	(16)	252	123	1836496
1845	17.9	1.0	0.3	chr19	17507653	17507943	(41109673)	C	AluJo	SINE/Alu	(17)	295	3	1836545
1081	17.3	6.7	8.1	chr19	17507958	17508228	(41109388)	C	MER44B	DNA/TcMar-Tigger	(284)	266	1	1836542
14	20.7	2.6	0.0	chr19	17687300	17687338	(40930278)	+	(CTCC)n	Simple_repeat	1	40	(0)	1837007
513	31.2	9.4	4.2	chr19	17835395	17835730	(40781886)	+	L2c	LINE/L2	2824	3175	(212)	1837398
240	34.5	2.9	7.8	chr19	17843966	17844182	(40773434)	+	L2c	LINE/L2	2970	3175	(212)	1837415
12	22.7	0.0	2.6	chr19	17872063	17872100	(40745516)	+	(GACA)n	Simple_repeat	1	38	(0)	1837490
1610	15.8	4.9	0.4	chr19	17953661	17953914	(40663702)	+	AluJb	SINE/Alu	2	267	(45)	1837703
2002	8.0	4.3	1.5	chr19	18057886	18058159	(40559457)	+	AluSq2	SINE/Alu	14	295	(18)	1837970
199	25.8	0.0	0.0	chr19	18292062	18292123	(40325493)	C	L2b	LINE/L2	(298)	3077	3016	1838554
16	24.4	1.6	4.7	chr19	18323042	18323104	(40294512)	+	(CGC)n	Simple_repeat	1	64	(0)	1838616
370	24.7	1.1	0.0	chr19	18328556	18328648	(40288968)	+	MLT1K	LTR/ERVL-MaLR	171	264	(331)	1838633
1974	14.1	1.7	1.7	chr19	18329216	18329514	(40288102)	+	AluJo	SINE/Alu	1	299	(13)	1838634
881	18.0	0.6	1.9	chr19	18416317	18416477	(40201139)	C	AluJb	SINE/Alu	(17)	295	137	1838865
306	35.6	5.7	0.6	chr19	18416486	18416841	(40200775)	+	L2c	LINE/L2	2798	3187	(188)	1838866
20	24.7	1.8	0.0	chr19	18419440	18419496	(40198120)	+	(GCC)n	Simple_repeat	1	58	(0)	1838870
752	30.7	14.2	1.6	chr19	18608688	18609322	(40008294)	+	L2b	LINE/L2	2441	3164	(211)	1839216
205	27.9	8.1	0.0	chr19	19062681	19062748	(39554868)	C	MIRc	SINE/MIR	(105)	163	90	1840176
2388	15.8	3.9	5.1	chr19	21506127	21506179	(37111437)	C	MER57E3	LTR/ERV1	(0)	487	441	1844140
1934	12.1	7.9	0.7	chr19	21506180	21506461	(37111155)	+	AluSx1	SINE/Alu	1	304	(8)	1844141
1833	12.1	3.1	4.7	chr19	23273428	23273725	(35343891)	+	AluSz	SINE/Alu	1	293	(19)	1846448
2208	20.3	2.7	2.9	chr19	23273726	23273754	(35343862)	+	MER57E3	LTR/ERV1	459	481	(6)	1846447
7281	9.8	2.3	1.1	chr19	28294697	28296097	(30321519)	C	L1MA3	LINE/L1	(0)	6305	4890	1848543
440	32.4	10.8	0.8	chr19	28597032	28597246	(30020370)	+	MIR	SINE/MIR	1	246	(22)	1849033
13	31.8	0.0	1.8	chr19	29526522	29526578	(29091038)	+	(GCCCCC)n	Simple_repeat	1	57	(0)	1850369
221	35.4	13.6	2.9	chr19	29845601	29846056	(28771560)	+	L2	LINE/L2	2333	2845	(574)	1850976
716	27.8	12.1	2.6	chr19	29879080	29879459	(28738157)	+	MLT1K	LTR/ERVL-MaLR	62	482	(113)	1851054
12	11.5	10.0	2.3	chr19	30227662	30227701	(28389915)	+	(GCGA)n	Simple_repeat	1	44	(0)	1851577
19	4.0	0.0	0.0	chr19	30227737	30227762	(28389854)	+	(GCC)n	Simple_repeat	1	26	(0)	1851578
17	21.1	0.0	2.2	chr19	30229107	30229152	(28388464)	+	(GTGT)n	Simple_repeat	1	46	(0)	1851582
23	24.4	1.1	6.2	chr19	30666354	30666448	(27951168)	+	(TCCC)n	Simple_repeat	1	96	(0)	1852165
23	24.9	1.7	0.0	chr19	31316751	31316808	(27300808)	+	GA-rich	Low_complexity	1	59	(0)	1853038
15	17.9	0.0	4.8	chr19	31349277	31349318	(27268298)	+	G-rich	Low_complexity	1	42	(0)	1853080
39	18.5	1.0	4.0	chr19	31349425	31349523	(27268093)	+	GA-rich	Low_complexity	1	100	(0)	1853081
4338	15.2	1.2	3.0	chr19	32392867	32393645	(26223971)	+	LTR60B	LTR/ERV1	1	765	(0)	1854709
2078	13.4	0.0	2.0	chr19	32393646	32393784	(26223832)	+	AluJb	SINE/Alu	167	301	(11)	1854708
22	28.2	1.4	1.4	chr19	32746890	32746959	(25870657)	+	GA-rich	Low_complexity	1	71	(0)	1855423
1688	18.6	6.5	0.3	chr19	32966835	32967125	(25650491)	C	AluJr	SINE/Alu	(2)	310	1	1855831
1384	17.2	13.2	8.8	chr19	33078040	33078314	(25539302)	C	LTR24	LTR/ERV1	(112)	355	28	1856115
763	15.8	0.8	0.0	chr19	33078315	33078434	(25539182)	+	AluJr	SINE/Alu	136	256	(56)	1856117
245	27.9	17.9	3.0	chr19	33143855	33144090	(25473526)	C	MamGypLTR3	LTR/Gypsy	(4)	890	612	1856278
514	29.3	11.8	7.8	chr19	33160554	33160886	(25456730)	C	L2b	LINE/L2	(46)	3329	2982	1856322
2296	11.2	0.0	0.6	chr19	33160889	33161202	(25456414)	+	AluSx	SINE/Alu	1	312	(0)	1856323
12	18.0	10.0	0.0	chr19	33302503	33302552	(25315064)	+	(CGCCCG)n	Simple_repeat	1	55	(0)	1856556
25	26.9	3.8	1.8	chr19	33795641	33795746	(24821870)	+	GA-rich	Low_complexity	1	110	(0)	1857330
31	20.7	5.2	5.0	chr19	33796639	33796772	(24820844)	+	GA-rich	Low_complexity	1	141	(0)	1857332
12	23.8	2.2	2.1	chr19	34134452	34134497	(24483119)	+	G-rich	Low_complexity	1	47	(0)	1857971
1953	11.5	8.8	0.0	chr19	34318760	34319037	(24298579)	+	AluSx	SINE/Alu	1	305	(7)	1858404
552	29.3	9.5	0.8	chr19	34319038	34319158	(24298458)	+	Tigger13a	DNA/TcMar-Tigger	513	642	(129)	1858403
200	29.8	12.9	0.8	chr19	34349422	34349543	(24268073)	+	MIRb	SINE/MIR	21	159	(109)	1858464
854	32.0	11.4	3.0	chr19	34962755	34963409	(23654207)	+	L2	LINE/L2	2366	3082	(337)	1859399
992	25.9	12.2	3.9	chr19	34998637	34999371	(23618245)	C	L2b	LINE/L2	(115)	3260	2454	1859478
17	29.1	3.1	1.5	chr19	35000120	35000184	(23617432)	+	(TC)n	Simple_repeat	1	67	(0)	1859480
559	25.2	8.2	6.5	chr19	35027806	35028063	(23589553)	+	MIR	SINE/MIR	11	258	(4)	1859544
489	29.4	9.2	2.7	chr19	35029573	35029907	(23587709)	C	L2a	LINE/L2	(158)	3268	2910	1859546
231	28.1	0.0	0.0	chr19	35044516	35044579	(23573037)	C	MamRep564	Unknown	(79)	278	215	1859580
338	31.5	4.0	5.8	chr19	35141669	35141878	(23475738)	C	L2b	LINE/L2	(10)	3377	3192	1859805
19	15.3	4.5	0.0	chr19	35142793	35142836	(23474780)	+	GA-rich	Low_complexity	1	46	(0)	1859807
1239	30.4	5.3	5.7	chr19	35150417	35151086	(23466530)	C	L2a	LINE/L2	(167)	3259	2556	1859824
235	23.1	4.4	0.0	chr19	35214504	35214568	(23403048)	+	MLT1K	LTR/ERVL-MaLR	88	155	(440)	1859956
574	24.5	17.3	0.0	chr19	35247509	35247821	(23369795)	C	L2a	LINE/L2	(241)	3185	2797	1860019
13	14.5	3.8	7.3	chr19	35645097	35645149	(22972467)	+	(GCCCCAA)n	Simple_repeat	1	55	(0)	1860832
14	16.9	0.0	2.9	chr19	35702827	35702861	(22914755)	+	(AGTGGA)n	Simple_repeat	1	35	(0)	1861017
807	29.4	12.6	1.2	chr19	35781424	35781852	(22835764)	C	L2a	LINE/L2	(17)	3409	2832	1861140
243	23.7	9.5	3.8	chr19	35820006	35820057	(22797559)	+	L2	LINE/L2	2339	2396	(1023)	1861233
62	0.0	0.0	0.0	chr19	35820058	35820110	(22797506)	+	(AC)n	Simple_repeat	1	53	(0)	1861234
243	23.7	9.5	3.8	chr19	35820111	35820136	(22797480)	+	L2	LINE/L2	2397	2422	(997)	1861233
368	26.9	4.4	0.0	chr19	35820143	35820272	(22797344)	+	MER20B	DNA/hAT-Charlie	7	142	(641)	1861235
13	14.8	2.4	4.8	chr19	35995120	35995160	(22622456)	+	(GAGGCGG)n	Simple_repeat	1	42	(0)	1861643
838	26.6	12.5	0.7	chr19	36128478	36128765	(22488851)	+	LTR10B	LTR/ERV1	179	505	(0)	1861928
21	9.8	0.0	0.0	chr19	36141039	36141071	(22476545)	+	(GGC)n	Simple_repeat	1	33	(0)	1861963
19	21.8	5.0	1.6	chr19	36604933	36604992	(22012624)	+	(CA)n	Simple_repeat	1	63	(0)	1862875
312	32.2	10.0	3.8	chr19	37907541	37907884	(20709732)	+	MIRb	SINE/MIR	1	266	(2)	1865342
1093	21.5	18.2	2.1	chr19	37933150	37933572	(20684044)	+	L2a	LINE/L2	2921	3426	(0)	1865413
1025	30.0	12.2	1.2	chr19	38197397	38198336	(20419280)	+	L2a	LINE/L2	2189	3282	(144)	1866092
967	18.1	3.4	7.0	chr19	38316237	38316451	(20301165)	+	AluJo	SINE/Alu	14	220	(92)	1866379
230	13.6	26.4	0.0	chr19	38390786	38390866	(20226750)	+	L2	LINE/L2	2817	2926	(493)	1866557
18	8.5	0.0	0.0	chr19	38667333	38667357	(19950259)	+	(TG)n	Simple_repeat	1	25	(0)	1867209
466	24.0	4.6	4.0	chr19	38868758	38868909	(19748707)	+	L2a	LINE/L2	3028	3180	(246)	1867626
825	27.4	18.7	1.3	chr19	39160288	39160720	(19456896)	C	L2a	LINE/L2	(0)	3426	2902	1868419
1721	13.3	1.6	0.4	chr19	39204588	39204842	(19412774)	+	AluJo	SINE/Alu	11	268	(44)	1868522
248	36.5	14.1	1.6	chr19	39340884	39341633	(19275983)	+	L2	LINE/L2	2092	2950	(469)	1868894
60	24.3	4.3	4.1	chr19	39342375	39342630	(19274986)	+	(CGG)n	Simple_repeat	1	267	(0)	1868896
1429	24.8	11.8	2.7	chr19	39410929	39411768	(19205848)	+	L2a	LINE/L2	2485	3426	(0)	1869014
13	18.1	5.6	6.7	chr19	39413694	39413764	(19203852)	+	(CCTCCGC)n	Simple_repeat	1	75	(0)	1869016
897	6.2	0.8	9.7	chr19	40403960	40404103	(18213513)	C	AluJo	SINE/Alu	(181)	131	1	1870961
13	29.6	0.0	0.0	chr19	40425604	40425648	(18191968)	+	(CGG)n	Simple_repeat	1	45	(0)	1871022
330	31.7	13.1	5.1	chr19	40426326	40426521	(18191095)	+	MIRb	SINE/MIR	54	267	(1)	1871023
415	30.1	5.8	4.0	chr19	40426517	40426717	(18190899)	+	MIR	SINE/MIR	11	215	(47)	1871024
213	32.4	2.8	1.9	chr19	40433754	40433860	(18183756)	C	L2a	LINE/L2	(198)	3177	3070	1871042
15	14.7	0.0	0.0	chr19	40433948	40433977	(18183639)	+	(GGGA)n	Simple_repeat	1	30	(0)	1871050
759	28.1	14.1	2.9	chr19	40492053	40492719	(18124897)	C	L2a	LINE/L2	(182)	3193	2443	1871224
243	32.7	3.2	1.7	chr19	40598566	40598696	(18018920)	C	MIR3	SINE/MIR	(136)	132	2	1871499
273	26.9	7.1	0.0	chr19	40974631	40974708	(17642908)	+	MIR	SINE/MIR	179	262	(0)	1872341
189	30.8	1.1	10.8	chr19	40974810	40974911	(17642705)	+	MIRb	SINE/MIR	50	141	(127)	1872342
651	25.9	3.2	8.8	chr19	41189553	41189814	(17427802)	C	L2	LINE/L2	(610)	2809	2563	1872832
23	18.7	0.0	0.0	chr19	41352982	41353030	(17264586)	+	(CAGCAG)n	Simple_repeat	1	49	(0)	1873223
18	20.0	3.8	1.8	chr19	41353639	41353691	(17263925)	+	(TCC)n	Simple_repeat	1	55	(0)	1873224
417	28.4	3.5	0.0	chr19	42034557	42034665	(16582951)	C	L2a	LINE/L2	(0)	3426	3314	1874426
13	4.5	0.0	7.4	chr19	42075887	42075913	(16541703)	+	(GGA)n	Simple_repeat	1	27	(0)	1874519
22	12.0	4.4	0.0	chr19	42313328	42313372	(16304244)	+	(GCCGGA)n	Simple_repeat	1	47	(0)	1875003
19	11.5	2.5	2.4	chr19	42313400	42313439	(16304177)	+	(GCT)n	Simple_repeat	1	41	(0)	1875004
2294	12.2	0.0	0.0	chr19	42382490	42382792	(16234824)	C	AluSq2	SINE/Alu	(10)	303	1	1875161
1655	27.9	10.8	1.7	chr19	42382793	42383540	(16234076)	C	L2a	LINE/L2	(237)	3189	2363	1875160
27	23.1	4.0	5.4	chr19	43354471	43354595	(15263021)	+	(TCCC)n	Simple_repeat	1	130	(0)	1876573
13	19.1	5.1	4.8	chr19	43504874	43504884	(15112732)	+	(GCCCCG)n	Simple_repeat	1	61	(0)	1876956
14	16.1	2.1	6.2	chr19	43504885	43504931	(15112685)	+	(GGCCC)n	Simple_repeat	1	48	(0)	1876957
844	21.3	18.2	1.3	chr19	43555234	43555551	(15062065)	+	LTR50	LTR/ERVL	1	384	(411)	1877087
636	23.0	24.4	1.5	chr19	43610499	43610665	(15006951)	+	L2a	LINE/L2	3222	3422	(4)	1877230
364	32.8	5.8	7.7	chr19	43610694	43611204	(15006412)	+	L2c	LINE/L2	2938	3307	(80)	1877232
568	26.6	8.2	0.6	chr19	43643454	43643623	(14973993)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	408	1877305
494	17.1	1.9	4.5	chr19	43643669	43643778	(14973838)	+	MLT1C	LTR/ERVL-MaLR	1	107	(360)	1877306
326	26.2	4.8	0.0	chr19	43670624	43670703	(14946913)	+	L2a	LINE/L2	3340	3423	(3)	1877382
1565	7.2	4.2	2.4	chr19	43670766	43670973	(14946643)	+	AluSc	SINE/Alu	97	308	(1)	1877383
1015	30.1	8.9	1.4	chr19	43672110	43672553	(14945063)	C	L2a	LINE/L2	(3)	3423	2943	1877389
402	24.8	7.5	8.6	chr19	43934794	43934956	(14682660)	C	MIR	SINE/MIR	(40)	222	62	1877949
530	27.9	23.4	2.3	chr19	44002277	44002540	(14615076)	+	L2	LINE/L2	459	778	(2641)	1878040
725	28.9	6.9	2.4	chr19	44140935	44141225	(14476391)	+	L2	LINE/L2	468	772	(2647)	1878265
355	25.6	8.8	0.6	chr19	44165401	44165557	(14452059)	+	MIR	SINE/MIR	61	231	(31)	1878310
2309	5.2	2.2	0.0	chr19	44211889	44212159	(14405457)	C	AluSx4	SINE/Alu	(5)	305	29	1878384
564	27.8	10.2	2.1	chr19	44260893	44261127	(14356489)	C	MIR	SINE/MIR	(0)	262	7	1878457
1927	13.1	4.3	0.7	chr19	44261163	44261453	(14356163)	+	AluJo	SINE/Alu	5	306	(6)	1878458
11	25.1	2.2	2.2	chr19	44753586	44753630	(13863986)	+	(ACCGGC)n	Simple_repeat	1	46	(0)	1879532
2375	9.6	0.3	0.0	chr19	45116912	45117212	(13500404)	C	AluSq	SINE/Alu	(11)	302	1	1880504
285	32.9	5.3	11.2	chr19	45117213	45117398	(13500218)	C	L2c	LINE/L2	(246)	3141	2949	1880503
827	25.3	3.1	10.1	chr19	45424217	45424524	(13193092)	C	L2b	LINE/L2	(0)	3375	3090	1881264
493	26.8	4.3	3.5	chr19	45424530	45424908	(13192708)	C	L1ME3G	LINE/L1	(769)	5377	5059	1881265
25	27.4	0.0	1.3	chr19	45886057	45886132	(12731484)	+	(GCC)n	Simple_repeat	1	76	(0)	1882486
255	31.5	6.7	1.8	chr19	45886406	45886518	(12731098)	+	MIR	SINE/MIR	34	152	(110)	1882487
445	23.5	0.0	1.0	chr19	46402441	46402539	(12215077)	+	MLT1H	LTR/ERVL-MaLR	57	154	(395)	1883568
315	25.6	0.0	2.4	chr19	46402545	46402628	(12214988)	+	L2a	LINE/L2	2813	2894	(525)	1883569
948	25.2	10.2	2.5	chr19	46766476	46767066	(11850550)	C	L2a	LINE/L2	(203)	3223	2573	1884482
1760	16.7	3.6	1.4	chr19	46783512	46783805	(11833811)	+	AluJb	SINE/Alu	1	301	(11)	1884534
12	22.4	0.0	6.4	chr19	47130933	47130979	(11486637)	+	GA-rich	Low_complexity	1	47	(0)	1885344
13	15.2	2.5	4.9	chr19	47230400	47230439	(11387177)	+	(GCCC)n	Simple_repeat	1	41	(0)	1885599
44	2.4	0.0	0.0	chr19	47241347	47241388	(11376228)	+	(CA)n	Simple_repeat	1	42	(0)	1885627
1857	15.2	3.3	0.0	chr19	47289273	47289569	(11328047)	C	AluSz6	SINE/Alu	(4)	308	2	1885763
2593	15.0	0.2	2.7	chr19	47289570	47289947	(11327669)	C	MER66B	LTR/ERV1	(86)	400	27	1885762
191	29.7	9.0	0.9	chr19	47648427	47648538	(10969078)	C	L2a	LINE/L2	(107)	3319	3198	1886682
552	9.2	1.3	0.0	chr19	47648591	47648666	(10968950)	+	AluSq10	SINE/Alu	1	77	(236)	1886683
2007	12.4	0.3	3.4	chr19	47648667	47648852	(10968764)	C	AluSz	SINE/Alu	(0)	312	137	1886684
188	27.8	1.8	0.0	chr19	48372895	48372948	(10244668)	C	MIRb	SINE/MIR	(52)	216	162	1888601
236	25.9	0.0	0.0	chr19	48372982	48373035	(10244581)	C	MIR	SINE/MIR	(10)	252	199	1888602
16	21.2	0.0	4.3	chr19	48393737	48393783	(10223833)	+	(GCC)n	Simple_repeat	1	47	(0)	1888650
460	22.1	1.9	0.0	chr19	48569968	48570071	(10047545)	C	MLT1D	LTR/ERVL-MaLR	(399)	106	1	1889097
811	28.9	3.6	6.4	chr19	48570073	48570172	(10047444)	C	L1ME1	LINE/L1	(251)	5928	5829	1889098
2383	9.5	0.3	0.0	chr19	48570173	48570478	(10047138)	C	AluSq2	SINE/Alu	(6)	307	1	1889099
18	11.7	8.0	3.7	chr19	48645813	48645862	(9971754)	+	(CT)n	Simple_repeat	1	54	(0)	1889271
245	24.0	1.3	2.6	chr19	48933823	48933899	(9683717)	C	MSR1	Satellite	(35)	76	1	1890003
913	27.4	10.5	3.2	chr19	49084893	49085054	(9532562)	+	L2a	LINE/L2	3262	3426	(0)	1890340
17	27.6	1.9	0.0	chr19	49802408	49802461	(8815155)	+	(CTCC)n	Simple_repeat	1	55	(0)	1891978
13	22.7	4.3	0.0	chr19	50203332	50203377	(8414239)	+	(CCTCGCG)n	Simple_repeat	1	48	(0)	1892963
12	28.1	1.7	3.3	chr19	50500436	50500494	(8117122)	+	(TCCCCC)n	Simple_repeat	1	60	(0)	1893651
189	35.2	7.8	3.6	chr19	50556523	50556743	(8060873)	+	L2a	LINE/L2	3194	3424	(2)	1893780
319	26.1	4.8	0.8	chr19	50564216	50564335	(8053281)	C	Charlie8	DNA/hAT-Charlie	(2290)	138	14	1893801
13	17.4	0.0	2.9	chr19	50564383	50564416	(8053200)	+	(GCAG)n	Simple_repeat	1	34	(0)	1893802
6999	15.3	4.4	2.4	chr19	50843093	50845117	(7772499)	C	L1PBa	LINE/L1	(4545)	2318	2	1894449
721	27.3	8.8	0.0	chr19	51021025	51021211	(7596405)	+	MER3	DNA/hAT-Charlie	1	205	(4)	1894833
919	31.0	8.2	6.8	chr19	51091945	51092875	(7524741)	+	L2b	LINE/L2	2490	3421	(5)	1894998
415	32.0	11.1	3.9	chr19	51688155	51688544	(6929072)	+	L2c	LINE/L2	2917	3338	(49)	1896047
87	27.5	4.3	2.6	chr19	51688644	51689110	(6928506)	+	GA-rich	Low_complexity	1	475	(0)	1896048
480	21.4	2.8	0.0	chr19	52943094	52943196	(5674420)	+	FLAM_A	SINE/Alu	3	108	(34)	1898517
214	32.0	1.0	4.8	chr19	53977759	53977863	(4639753)	C	MIR3	SINE/MIR	(23)	185	85	1900727
849	8.3	0.0	0.0	chr19	55167170	55167277	(3450339)	+	U13	snRNA	1	108	(0)	1903141
239	29.1	12.2	0.0	chr19	55301150	55301235	(3316381)	+	L2c	LINE/L2	3290	3387	(0)	1903430
485	28.9	0.7	0.7	chr19	55301342	55301484	(3316132)	+	MIR	SINE/MIR	55	197	(65)	1903431
17	12.0	2.6	2.6	chr19	55370503	55370540	(3247076)	+	G-rich	Low_complexity	1	39	(0)	1903598
589	10.8	7.6	0.1	chr19	55448013	55449159	(3168457)	+	(AC)n	Simple_repeat	1	1234	(0)	1903759
722	26.9	12.6	4.0	chr19	55462351	55462659	(3154957)	+	L2a	LINE/L2	2857	3213	(213)	1903781
12	13.2	9.3	2.1	chr19	55580979	55581021	(3036595)	+	G-rich	Low_complexity	1	47	(0)	1904074
19	23.5	0.0	4.6	chr19	55624644	55624708	(2992908)	+	G-rich	Low_complexity	1	65	(0)	1904169
327	32.4	5.8	0.7	chr19	55647453	55647598	(2970018)	C	MIRb	SINE/MIR	(0)	268	115	1904230
358	27.0	12.5	3.5	chr19	55673227	55673487	(2944129)	C	L1MC5a	LINE/L1	(351)	2426	2139	1904269
238	31.0	15.5	0.6	chr19	58519001	58519159	(98457)	+	L2	LINE/L2	2650	2836	(583)	1909663
180	25.0	5.5	3.7	chr2	568323	568376	(241625153)	+	L3	LINE/CR1	2674	2728	(1371)	1911368
399	11.5	14.5	6.2	chr2	10120423	10120535	(232072994)	+	FLAM_C	SINE/Alu	12	135	(8)	1924224
12	27.0	0.0	2.2	chr2	10733774	10733819	(231459710)	+	(CTTGGTG)n	Simple_repeat	1	46	(0)	1925362
13	15.3	2.5	4.9	chr2	20614886	20614925	(221578604)	+	(CCAGGAG)n	Simple_repeat	1	41	(0)	1940641
17	22.1	0.0	0.0	chr2	23926681	23926722	(218266807)	+	(CCCAGG)n	Simple_repeat	1	42	(0)	1945109
12	17.4	0.0	8.7	chr2	23926821	23926866	(218266663)	+	(GGCC)n	Simple_repeat	1	46	(0)	1945110
205	29.9	9.4	8.3	chr2	24048795	24048962	(218144567)	+	L2c	LINE/L2	3208	3377	(10)	1945408
1382	10.2	0.0	6.6	chr2	24049165	24049390	(218144139)	+	AluJo	SINE/Alu	94	304	(8)	1945409
17	5.0	0.0	0.0	chr2	24490481	24490501	(217703028)	+	(A)n	Simple_repeat	1	21	(0)	1946254
13	20.1	2.2	4.3	chr2	24490502	24490518	(217703011)	+	GA-rich	Low_complexity	15	45	(0)	1946255
191	27.6	8.4	4.4	chr2	24490668	24490826	(217702703)	C	MIR3	SINE/MIR	(42)	166	1	1946256
19	22.1	0.0	0.0	chr2	24490925	24490971	(217702558)	+	G-rich	Low_complexity	1	47	(0)	1946257
844	30.9	9.9	3.1	chr2	24832814	24833730	(217359799)	+	L2a	LINE/L2	2586	3426	(0)	1946794
359	28.6	3.1	8.7	chr2	25010410	25010485	(217183044)	C	L1ME4a	LINE/L1	(2)	6122	6053	1947119
365	32.4	14.7	1.4	chr2	26346835	26347041	(215846488)	+	MIRb	SINE/MIR	16	254	(14)	1949792
3253	20.9	9.7	5.9	chr2	26377644	26378215	(215815314)	C	L1M4a1	LINE/L1	(1325)	1752	872	1949855
12	0.0	0.0	5.0	chr2	26847947	26847966	(215345563)	+	(GGC)n	Simple_repeat	1	20	(0)	1950752
40	4.8	0.0	0.0	chr2	27720178	27720220	(214473309)	+	(GT)n	Simple_repeat	1	43	(0)	1952346
25	16.9	4.3	2.7	chr2	28392701	28392770	(213800759)	+	(CCT)n	Simple_repeat	1	73	(0)	1953484
13	17.5	1.6	10.8	chr2	28393615	28393678	(213799851)	+	(GCG)n	Simple_repeat	1	65	(0)	1953487
12	19.8	7.9	4.9	chr2	30231338	30231413	(211962116)	+	(CGCAGC)n	Simple_repeat	1	82	(0)	1956612
28	16.9	0.0	0.0	chr2	31138378	31138430	(211055099)	+	(CGC)n	Simple_repeat	1	53	(0)	1958026
22	23.4	1.6	1.6	chr2	32357248	32357347	(209836182)	+	(GGC)n	Simple_repeat	1	100	(0)	1960156
303	27.7	8.6	3.0	chr2	33590277	33590440	(208603089)	+	Tigger15a	DNA/TcMar-Tigger	155	328	(387)	1962224
923	27.3	14.6	1.7	chr2	37230511	37231021	(204962508)	+	L2a	LINE/L2	2735	3337	(89)	1967374
14	22.0	0.0	4.3	chr2	37344954	37344999	(204848530)	+	(GGCCCC)n	Simple_repeat	1	46	(0)	1967578
367	23.8	10.3	2.8	chr2	37828161	37828268	(204365261)	C	UCON55	DNA/TcMar-Tigger	(71)	121	5	1968302
608	28.3	3.6	4.4	chr2	38095457	38095707	(204097822)	C	MIRb	SINE/MIR	(6)	262	14	1968680
2413	8.6	0.3	0.6	chr2	38383464	38383777	(203809752)	+	AluSp	SINE/Alu	1	313	(0)	1969112
307	34.2	15.1	6.2	chr2	38440845	38441246	(203752283)	C	L2b	LINE/L2	(1)	3374	2931	1969229
27	19.5	3.1	5.9	chr2	39437114	39437211	(202756318)	+	(CGC)n	Simple_repeat	1	101	(0)	1971190
16	18.8	2.3	2.2	chr2	39437296	39437339	(202756190)	+	(CTC)n	Simple_repeat	1	45	(0)	1971191
398	29.5	4.5	3.2	chr2	41909647	41909800	(200283729)	C	LTR78	LTR/ERV1	(181)	1123	968	1974627
377	27.4	11.7	2.8	chr2	41909849	41910066	(200283463)	C	LTR78	LTR/ERV1	(1057)	247	8	1974627
13	23.0	0.0	2.6	chr2	43225378	43225415	(198968114)	+	(CTG)n	Simple_repeat	1	38	(0)	1977141
13	17.9	0.0	9.4	chr2	45009295	45009347	(197184182)	+	(AAGCCC)n	Simple_repeat	1	53	(0)	1980087
17	25.1	5.1	2.4	chr2	45009363	45009441	(197184088)	+	(CGCT)n	Simple_repeat	1	83	(0)	1980088
348	8.9	0.0	0.0	chr2	46662756	46662800	(195530729)	+	L4_B_Mam	LINE/RTE-X	4894	4938	(3)	1982612
331	30.6	10.6	1.8	chr2	46847188	46847350	(195346179)	C	MIR3	SINE/MIR	(27)	181	3	1982926
544	23.9	9.9	0.6	chr2	46872189	46872344	(195321185)	+	MLT1I	LTR/ERVL-MaLR	7	178	(233)	1982968
18	14.2	10.6	0.0	chr2	47906280	47906326	(194287203)	+	(TC)n	Simple_repeat	1	52	(0)	1985046
16	8.5	4.9	4.7	chr2	48314620	48314660	(193878869)	+	G-rich	Low_complexity	1	43	(0)	1985747
14	23.3	0.0	2.4	chr2	48314663	48314704	(193878825)	+	(TGC)n	Simple_repeat	1	42	(0)	1985748
23	26.6	1.2	2.4	chr2	54456068	54456153	(187737376)	+	G-rich	Low_complexity	1	85	(0)	1994401
302	32.2	11.2	3.1	chr2	54490717	54491130	(187702399)	C	L2c	LINE/L2	(222)	3165	2704	1994459
56	20.4	1.4	2.8	chr2	55269449	55269589	(186923940)	+	(TTTC)n	Simple_repeat	1	143	(0)	1995600
180	17.6	0.0	2.9	chr2	55843154	55843188	(186350341)	C	OldhAT1	DNA/hAT-Ac	(2217)	631	598	1996653
16	19.5	3.5	5.0	chr2	60555237	60555305	(181638224)	+	(CCG)n	Simple_repeat	1	67	(0)	2002585
789	28.5	11.4	2.7	chr2	61792410	61792737	(180400792)	C	LTR105_Mam	LTR/ERVL	(202)	398	39	2005195
18	22.0	0.0	5.2	chr2	64653805	64653862	(177539667)	+	(GGC)n	Simple_repeat	1	58	(0)	2009702
15	29.0	1.7	1.6	chr2	64770853	64770912	(177422617)	+	(CAG)n	Simple_repeat	1	61	(0)	2009908
23	19.1	0.0	0.0	chr2	65129922	65129969	(177063560)	+	(GCC)n	Simple_repeat	1	48	(0)	2010632
252	31.2	19.3	2.7	chr2	65465771	65466136	(176727393)	C	L2b	LINE/L2	(22)	3353	2913	2011307
19	12.8	0.0	0.0	chr2	66574855	66574888	(175618641)	+	(GCA)n	Simple_repeat	1	34	(0)	2012926
13	0.0	5.0	0.0	chr2	68829206	68829225	(173364304)	+	(TTG)n	Simple_repeat	1	21	(0)	2016137
4560	21.3	6.9	3.7	chr2	69774640	69775458	(172418071)	C	MER21-int	LTR/ERVL	(3214)	977	123	2017734
462	24.2	12.9	4.4	chr2	69775548	69775772	(172417757)	C	LTR35B	LTR/ERV1	(93)	512	266	2017738
1895	24.2	4.9	3.5	chr2	70119051	70119488	(172074041)	C	L2a	LINE/L2	(148)	3278	2821	2018428
741	27.2	7.4	0.6	chr2	70122871	70123109	(172070420)	C	MIRc	SINE/MIR	(0)	268	25	2018439
12	25.6	2.6	0.0	chr2	72145617	72145655	(170047874)	+	(TCTTT)n	Simple_repeat	1	40	(0)	2021631
729	14.6	3.8	1.3	chr2	73981617	73981769	(168211760)	C	MER5A	DNA/hAT-Charlie	(32)	157	1	2024571
255	34.1	11.7	4.0	chr2	74000305	74000603	(168192926)	C	L2c	LINE/L2	(46)	3341	3017	2024608
231	20.9	14.9	2.3	chr2	74001279	74001401	(168192128)	+	MIR3	SINE/MIR	3	150	(118)	2024610
282	23.2	14.7	3.9	chr2	74001413	74001555	(168191974)	C	MIR	SINE/MIR	(46)	222	59	2024611
4873	12.3	2.8	0.1	chr2	74187899	74188644	(168004885)	+	LTR27C	LTR/ERV1	2	767	(0)	2024957
16	7.5	0.0	3.3	chr2	84905594	84905623	(157287906)	+	(GGCGG)n	Simple_repeat	1	30	(0)	2039635
255	31.7	1.0	2.9	chr2	84959944	84960047	(157233482)	C	MER5B	DNA/hAT-Charlie	(2)	176	75	2039779
1086	14.3	1.8	3.0	chr2	84960189	84960356	(157233173)	C	AluJb	SINE/Alu	(10)	302	137	2039780
17	12.3	2.7	2.6	chr2	85354466	85354502	(156839027)	+	(CAG)n	Simple_repeat	1	38	(0)	2040586
16	14.2	0.0	0.0	chr2	85612145	85612175	(156581354)	+	(TCGGG)n	Simple_repeat	1	31	(0)	2041126
19	14.4	0.0	0.0	chr2	85612207	85612237	(156581292)	+	(T)n	Simple_repeat	1	31	(0)	2041127
2534	4.1	1.0	0.0	chr2	85615638	85615929	(156577600)	C	AluSp	SINE/Alu	(18)	295	1	2041140
284	26.3	8.3	2.2	chr2	86808329	86808464	(155385065)	C	MIR3	SINE/MIR	(8)	200	56	2043241
360	32.9	3.1	3.1	chr2	95334295	95334454	(146859075)	C	MIRc	SINE/MIR	(25)	243	84	2050528
2370	14.3	4.4	2.6	chr2	96386525	96386948	(145806581)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	2052050
248	34.6	12.4	1.9	chr2	98734989	98735147	(143458382)	C	L2b	LINE/L2	(82)	3293	3116	2055407
34	3.0	0.0	0.0	chr2	99882056	99882089	(142311440)	+	(TC)n	Simple_repeat	1	34	(0)	2057106
824	15.2	8.6	0.0	chr2	101252312	101252449	(140941080)	C	AluJr	SINE/Alu	(25)	287	137	2059270
19	16.9	8.8	1.4	chr2	104852476	104852543	(137340986)	+	(GGCTGCG)n	Simple_repeat	1	74	(0)	2064060
30	14.0	2.6	5.0	chr2	104853225	104853302	(137340227)	+	GA-rich	Low_complexity	1	80	(0)	2064063
597	25.5	4.8	0.6	chr2	111896692	111896849	(130296680)	C	L2a	LINE/L2	(267)	3159	2995	2074215
12	25.4	3.8	1.8	chr2	112138660	112138712	(130054817)	+	(TGCTCC)n	Simple_repeat	1	55	(0)	2074606
546	31.7	11.3	3.4	chr2	113407501	113407991	(128785538)	+	L2a	LINE/L2	2869	3401	(25)	2076738
23	8.1	2.6	0.0	chr2	119224346	119224384	(122969145)	+	(GGGCAG)n	Simple_repeat	1	40	(0)	2084940
19	0.0	0.0	0.0	chr2	119760872	119760892	(122432637)	+	(A)n	Simple_repeat	1	21	(0)	2085919
300	33.0	12.6	3.9	chr2	120014388	120014853	(122178676)	C	L2a	LINE/L2	(38)	3388	2881	2086316
23	10.0	0.0	0.0	chr2	120348223	120348255	(121845274)	+	(A)n	Simple_repeat	1	33	(0)	2086809
42	29.9	6.6	1.5	chr2	120741358	120741652	(121451877)	+	(CTCT)n	Simple_repeat	1	309	(0)	2087497
548	31.6	9.9	4.7	chr2	120875668	120876059	(121317470)	+	L1ME4a	LINE/L1	4573	4992	(1154)	2087692
454	24.1	8.8	3.3	chr2	120884445	120884594	(121308935)	+	OldhAT1	DNA/hAT-Ac	694	852	(1996)	2087703
2063	12.8	0.0	5.6	chr2	121254504	121254824	(120938705)	+	AluSx	SINE/Alu	2	304	(8)	2088355
948	29.9	4.2	0.6	chr2	121286774	121287119	(120906410)	+	LTR16A	LTR/ERVL	54	412	(39)	2088429
408	32.4	5.6	10.0	chr2	122005700	122006120	(120187409)	C	L2c	LINE/L2	(80)	3346	2986	2089772
258	36.1	1.8	0.9	chr2	122006139	122006247	(120187282)	C	L2c	LINE/L2	(527)	2892	2783	2089772
2635	12.3	4.9	0.0	chr2	127359574	127359980	(114833549)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2097304
1922	14.3	8.7	0.7	chr2	127527075	127527554	(114665975)	+	MER92C	LTR/ERV1	8	590	(0)	2097595
180	33.3	0.0	0.0	chr2	127860113	127860157	(114333372)	C	MIRb	SINE/MIR	(181)	87	43	2098149
757	18.4	13.8	1.4	chr2	130391863	130392083	(111801446)	C	Charlie5	DNA/hAT-Charlie	(0)	2624	2372	2101762
42	13.6	2.3	2.3	chr2	144520396	144520481	(97673048)	+	(CCTC)n	Simple_repeat	1	88	(0)	2121497
15	13.7	0.0	0.0	chr2	144524562	144524585	(97668944)	+	(G)n	Simple_repeat	1	24	(0)	2121500
637	22.1	0.0	1.5	chr2	144547006	144547138	(97646391)	+	MER94B	DNA/hAT-Blackjack	3	133	(0)	2121541
870	28.6	10.6	0.3	chr2	144550744	144551055	(97642474)	C	L2a	LINE/L2	(13)	3413	3066	2121550
8647	16.6	2.3	0.4	chr2	144551056	144552454	(97641075)	C	ERVL-int	LTR/ERVL	(1658)	4099	2674	2121551
1378	13.7	0.9	1.4	chr2	152091437	152091648	(90101881)	+	AluSx	SINE/Alu	85	295	(17)	2131842
735	22.7	2.8	0.0	chr2	152091665	152091836	(90101693)	+	LTR33A_	LTR/ERVL	1	177	(354)	2131843
770	25.9	14.7	1.9	chr2	152925926	152926511	(89267018)	+	LTR50	LTR/ERVL	1	795	(0)	2133163
28	0.0	0.0	0.0	chr2	157257987	157258012	(84935517)	+	(CTG)n	Simple_repeat	1	26	(0)	2138502
12	4.7	4.5	0.0	chr2	157839070	157839091	(84354438)	+	(TTTA)n	Simple_repeat	1	23	(0)	2139263
359	27.6	9.2	4.0	chr2	158743880	158744053	(83449476)	C	MLT1L	LTR/ERVL-MaLR	(256)	354	171	2140492
16	0.0	5.0	0.0	chr2	159616568	159616587	(82576942)	+	(TC)n	Simple_repeat	1	21	(0)	2141865
12	16.9	2.9	2.8	chr2	159712267	159712301	(82481228)	+	(GCCA)n	Simple_repeat	1	36	(0)	2142019
17	21.5	0.0	3.9	chr2	160408042	160408093	(81785436)	+	G-rich	Low_complexity	1	52	(0)	2143039
27	19.3	5.8	2.2	chr2	161238802	161238888	(80954641)	+	(CCCT)n	Simple_repeat	1	92	(0)	2144146
15	30.4	2.5	2.4	chr2	163348534	163348613	(78844916)	+	(CTGCTT)n	Simple_repeat	1	82	(0)	2146828
24	6.6	0.0	0.0	chr2	166376221	166376252	(75817277)	+	(GT)n	Simple_repeat	1	32	(0)	2150941
18	18.9	4.2	0.0	chr2	166494277	166494324	(75699205)	+	(TCTCC)n	Simple_repeat	1	50	(0)	2151109
12	24.9	3.6	3.5	chr2	166494325	166494332	(75699197)	+	(TCCCC)n	Simple_repeat	1	58	(0)	2151110
17	26.2	4.0	2.5	chr2	168247582	168247671	(73945858)	+	GA-rich	Low_complexity	1	91	(0)	2153275
17	11.3	2.4	4.7	chr2	168247729	168247770	(73945759)	+	(CCGCTC)n	Simple_repeat	1	43	(0)	2153276
13261	17.4	2.7	2.8	chr2	169714794	169717187	(72476342)	C	HERVL18-int	LTR/ERVL	(3595)	2452	2	2155456
316	20.2	8.1	2.5	chr2	172095918	172095998	(70097531)	+	Charlie4z	DNA/hAT-Charlie	82	167	(0)	2159587
16	23.5	5.5	2.6	chr2	173965785	173965857	(68227672)	+	(GCTGCC)n	Simple_repeat	1	77	(0)	2162466
14	16.2	0.0	0.0	chr2	173965834	173965861	(68227668)	+	(GCT)n	Simple_repeat	1	28	(0)	2162467
479	28.1	15.3	1.8	chr2	174023917	174024253	(68169276)	+	LTR33	LTR/ERVL	112	502	(13)	2162588
15	33.7	1.3	1.3	chr2	174337823	174337898	(67855631)	+	(CACACG)n	Simple_repeat	1	77	(0)	2163105
320	30.0	5.6	5.6	chr2	175309862	175310041	(66883488)	+	AmnSINE1	SINE/5S-Deu-L2	16	195	(380)	2164623
18	28.0	2.9	4.7	chr2	176092724	176092826	(66100703)	+	GA-rich	Low_complexity	1	106	(0)	2165652
25	15.8	6.9	1.3	chr2	176092850	176092924	(66100605)	+	G-rich	Low_complexity	1	79	(0)	2165653
20	16.4	5.9	4.2	chr2	176106847	176106915	(66086614)	+	(TCC)n	Simple_repeat	1	70	(0)	2165664
19	20.9	0.0	0.0	chr2	176130686	176130734	(66062795)	+	(CCT)n	Simple_repeat	1	49	(0)	2165688
405	30.8	1.9	3.7	chr2	176748015	176748176	(65445353)	C	L2a	LINE/L2	(0)	3426	3268	2166586
2312	18.6	4.0	0.9	chr2	176955740	176956200	(65237329)	C	MER70B	LTR/ERVL	(102)	476	1	2166866
16	20.7	4.1	7.9	chr2	179861032	179861128	(62332401)	+	G-rich	Low_complexity	1	101	(0)	2170734
287	29.5	6.7	7.3	chr2	180632648	180632826	(61560703)	C	L2a	LINE/L2	(254)	3121	2944	2171715
13	16.2	0.0	0.0	chr2	181656652	181656679	(60536850)	+	G-rich	Low_complexity	1	28	(0)	2172979
735	23.3	18.3	7.4	chr2	183010118	183010559	(59182970)	+	MLT1H	LTR/ERVL-MaLR	47	579	(0)	2174777
18	3.7	3.6	0.0	chr2	187554546	187554574	(54638955)	+	(TCTT)n	Simple_repeat	1	30	(0)	2180521
194	35.2	7.7	2.7	chr2	189465446	189465556	(52727973)	C	MIR3	SINE/MIR	(64)	144	28	2182867
543	28.2	7.4	0.0	chr2	189465666	189465828	(52727701)	C	MIRb	SINE/MIR	(1)	267	92	2182868
13	14.0	4.7	4.4	chr2	189580477	189580519	(52613010)	+	(GCTGCT)n	Simple_repeat	1	45	(0)	2183042
210	32.5	2.4	1.2	chr2	189762931	189763011	(52430518)	C	MIRb	SINE/MIR	(151)	117	36	2183331
23	33.4	0.0	2.2	chr2	196325161	196325250	(45868279)	+	GA-rich	Low_complexity	1	90	(0)	2192226
13	25.0	2.0	2.0	chr2	196593698	196593746	(45599783)	+	(GGCTGA)n	Simple_repeat	1	50	(0)	2192635
186	32.8	12.8	4.8	chr2	196783619	196783890	(45409639)	+	L2c	LINE/L2	3051	3347	(40)	2192900
17	15.9	0.0	0.0	chr2	197310728	197310762	(44882767)	+	(CCTCCT)n	Simple_repeat	1	35	(0)	2193752
14	11.8	7.7	2.4	chr2	199457621	199457659	(42735870)	+	GA-rich	Low_complexity	1	42	(0)	2196846
2651	20.4	10.0	2.2	chr2	200765523	200766193	(41427336)	C	MER21C	LTR/ERVL	(88)	850	122	2198810
2113	7.5	0.4	2.9	chr2	200888517	200888797	(41304732)	C	AluSx	SINE/Alu	(10)	302	29	2199070
443	33.7	10.7	2.7	chr2	201041315	201041726	(41151803)	+	L2a	LINE/L2	2904	3357	(69)	2199375
12	19.8	4.7	2.2	chr2	201807808	201807850	(40385679)	+	(CTTTCCC)n	Simple_repeat	1	45	(0)	2200620
16	22.1	8.0	1.2	chr2	202376124	202376198	(39817331)	+	(CGGCGC)n	Simple_repeat	1	81	(0)	2201854
22	3.5	0.0	0.0	chr2	202376172	202376200	(39817329)	+	(CCG)n	Simple_repeat	1	29	(0)	2201855
18	29.1	1.4	2.7	chr2	202376240	202376327	(39817202)	+	(GGC)n	Simple_repeat	1	86	(0)	2201856
1019	27.5	12.2	3.4	chr2	206431520	206431709	(35761820)	C	LTR16A	LTR/ERVL	(0)	451	225	2208618
483	15.4	22.8	0.0	chr2	206431710	206431858	(35761671)	C	MER53	DNA/hAT	(0)	193	1	2208619
20	17.6	2.2	0.0	chr2	207163398	207163442	(35030087)	+	GA-rich	Low_complexity	1	46	(0)	2209616
17	23.9	5.6	0.0	chr2	207165736	207165789	(35027740)	+	GA-rich	Low_complexity	1	57	(0)	2209617
15	27.2	0.0	0.0	chr2	207166071	207166112	(35027417)	+	(TCC)n	Simple_repeat	1	42	(0)	2209619
500	20.9	13.9	9.7	chr2	207926154	207926381	(34267148)	C	MER102b	DNA/hAT-Charlie	(2172)	256	27	2210966
797	31.7	1.8	1.8	chr2	212523861	212524133	(29669396)	C	L3	LINE/CR1	(138)	3961	3689	2217063
19	18.8	2.0	2.0	chr2	214809689	214809738	(27383791)	+	(GGCGG)n	Simple_repeat	1	51	(0)	2220126
23	20.3	5.3	1.3	chr2	215436150	215436224	(26757305)	+	(CCCG)n	Simple_repeat	1	79	(0)	2221075
4360	16.6	1.9	3.0	chr2	216114477	216115267	(26078262)	+	MER50C	LTR/ERV1	1	782	(0)	2222208
15	14.9	3.3	7.9	chr2	216339295	216339355	(25854174)	+	(TCTCTCC)n	Simple_repeat	1	63	(0)	2222559
1003	31.8	3.0	6.4	chr2	217436093	217436670	(24756859)	+	LTR81C	LTR/Gypsy	38	595	(558)	2224392
227	22.1	18.1	0.0	chr2	218287171	218287238	(23906291)	C	MIR3	SINE/MIR	(14)	194	112	2225773
13	14.6	0.0	8.9	chr2	218857638	218857682	(23335847)	+	G-rich	Low_complexity	1	45	(0)	2226933
13	20.8	4.3	2.1	chr2	219486494	219486539	(22706990)	+	GA-rich	Low_complexity	1	48	(0)	2228019
33	15.2	0.0	1.7	chr2	221205040	221205099	(20988430)	+	(TA)n	Simple_repeat	1	60	(0)	2230702
657	17.8	8.5	0.0	chr2	223780169	223780286	(18413243)	C	AluJb	SINE/Alu	(59)	253	125	2234830
465	32.4	6.8	4.6	chr2	226673582	226673840	(15519689)	+	MIRc	SINE/MIR	4	268	(0)	2239288
13	22.4	0.0	4.4	chr2	226799274	226799318	(15394211)	+	(CGCCACC)n	Simple_repeat	1	45	(0)	2239466
33	7.2	0.0	0.0	chr2	226799349	226799392	(15394137)	+	(GCT)n	Simple_repeat	1	44	(0)	2239467
317	30.7	14.9	6.8	chr2	227164586	227164910	(15028619)	+	L1M4b	LINE/L1	317	672	(6195)	2240010
27	0.0	2.6	5.0	chr2	229714596	229714634	(12478895)	+	(GCGGG)n	Simple_repeat	1	40	(0)	2243977
14	11.0	7.0	4.3	chr2	229901797	229901839	(12291690)	+	GA-rich	Low_complexity	1	46	(0)	2244277
259	30.6	11.1	3.4	chr2	229901842	229901990	(12291539)	+	MLT1L	LTR/ERVL-MaLR	2	163	(447)	2244278
390	29.6	14.9	0.0	chr2	231245129	231245317	(10948212)	C	L4_A_Mam	LINE/RTE-X	(2373)	2617	2396	2246497
551	21.0	4.0	2.5	chr2	231245355	231245476	(10948053)	+	LSU-rRNA_Hsa	rRNA	4909	5032	(3)	2246502
468	35.1	6.9	5.2	chr2	231245783	231246182	(10947347)	C	L4_A_Mam	LINE/RTE-X	(2622)	2368	1962	2246497
14	16.9	0.0	2.9	chr2	231666540	231666574	(10526955)	+	G-rich	Low_complexity	1	35	(0)	2247403
318	28.5	12.3	4.4	chr2	232890858	232891264	(9302265)	+	L2c	LINE/L2	2934	3366	(9)	2249503
55	0.0	0.0	0.0	chr2	232988037	232988083	(9205446)	+	(GT)n	Simple_repeat	1	47	(0)	2249674
240	28.4	1.3	0.0	chr2	236661189	236661262	(5532267)	+	MER63D	DNA/hAT-Blackjack	4	78	(983)	2255307
478	21.2	0.0	0.0	chr2	236661261	236661345	(5532184)	+	MER63B	DNA/hAT-Blackjack	303	387	(49)	2255308
388	16.4	0.0	0.0	chr2	237675001	237675073	(4518456)	+	LTR50	LTR/ERVL	211	283	(512)	2256703
186	17.9	0.0	0.0	chr20	330603	330641	(64113526)	+	MIR3	SINE/MIR	81	119	(89)	2262676
380	35.2	11.1	3.2	chr20	378060	378373	(64065794)	+	L2a	LINE/L2	3047	3388	(38)	2262806
197	32.5	13.6	0.0	chr20	378453	378566	(64065601)	+	MIRb	SINE/MIR	67	198	(70)	2262807
12	23.6	0.0	4.5	chr20	382016	382059	(64062108)	+	G-rich	Low_complexity	1	44	(0)	2262815
2101	15.7	8.5	3.7	chr20	415676	416078	(64028089)	C	MSTA	LTR/ERVL-MaLR	(0)	428	5	2262895
13	18.4	5.7	3.6	chr20	462515	462567	(63981600)	+	(CCGCGGC)n	Simple_repeat	1	56	(0)	2262991
192	26.9	20.0	6.3	chr20	462725	462835	(63981332)	+	MIR	SINE/MIR	118	247	(15)	2262992
258	28.1	0.0	0.9	chr20	833352	833435	(63610732)	C	MIR3	SINE/MIR	(149)	119	40	2263836
21	22.0	5.6	5.3	chr20	1391731	1391838	(63052329)	+	GA-rich	Low_complexity	1	114	(0)	2264921
8082	17.9	5.2	5.7	chr20	1800028	1801002	(62643165)	+	L1MC3	LINE/L1	6553	7583	(620)	2265603
577	21.0	4.1	5.3	chr20	1801009	1801179	(62642988)	C	L1MC3	LINE/L1	(396)	7389	7221	2265620
2339	6.5	4.0	0.0	chr20	1900092	1900383	(62543784)	C	AluSp	SINE/Alu	(4)	309	6	2265858
180	31.7	10.7	10.7	chr20	2746908	2747010	(61697157)	C	MIRc	SINE/MIR	(28)	240	132	2267525
16	19.2	0.0	0.0	chr20	2821823	2821852	(61622315)	+	(T)n	Simple_repeat	1	30	(0)	2267651
24	24.7	1.4	1.4	chr20	3112122	3112192	(61331975)	+	G-rich	Low_complexity	1	72	(0)	2268229
2544	15.3	3.3	1.4	chr20	3273344	3273761	(61170406)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2268549
19	23.3	3.3	0.0	chr20	3407968	3408027	(61036140)	+	(CCCGG)n	Simple_repeat	1	62	(0)	2268793
218	21.6	8.9	1.9	chr20	3676058	3676109	(60768058)	+	MIR	SINE/MIR	195	250	(12)	2269293
420	31.5	17.1	2.2	chr20	3744486	3744852	(60699315)	+	L2	LINE/L2	2637	3069	(350)	2269424
1217	32.2	12.5	4.5	chr20	4150062	4150824	(60293343)	+	L2b	LINE/L2	1708	2535	(884)	2270253
14	20.2	1.7	6.8	chr20	4172526	4172583	(60271584)	+	GA-rich	Low_complexity	1	59	(0)	2270293
905	28.3	18.1	0.8	chr20	4697254	4697935	(59746232)	C	L2a	LINE/L2	(0)	3426	2581	2271170
18	13.7	2.4	2.3	chr20	4823488	4823529	(59620638)	+	(CCCT)n	Simple_repeat	1	43	(0)	2271388
12	22.8	4.8	0.0	chr20	4823639	4823680	(59620487)	+	(CCTCC)n	Simple_repeat	1	44	(0)	2271389
83	2.5	0.0	0.0	chr20	10034876	10034957	(54409210)	+	(GGCGGA)n	Simple_repeat	1	82	(0)	2279873
47	0.0	0.0	0.0	chr20	10217312	10217351	(54226816)	+	(TG)n	Simple_repeat	1	40	(0)	2280181
16	17.5	2.1	2.0	chr20	10217352	10217390	(54226777)	+	G-rich	Low_complexity	9	47	(0)	2280182
677	25.6	10.1	1.6	chr20	10611280	10611533	(53832634)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	318	2280813
24	27.4	2.1	3.1	chr20	10673536	10673629	(53770538)	+	(CGC)n	Simple_repeat	1	96	(0)	2280873
233	31.0	3.4	6.6	chr20	13638297	13638479	(50805688)	+	L2	LINE/L2	2081	2257	(1162)	2285133
19	22.7	0.0	0.0	chr20	20212278	20212318	(44231849)	+	(CT)n	Simple_repeat	1	41	(0)	2295337
13	3.7	0.0	11.4	chr20	23421480	23421514	(41022653)	+	(CGCAGG)n	Simple_repeat	1	35	(0)	2299690
13	27.4	0.0	2.2	chr20	23637427	23637472	(40806695)	+	(CCAGG)n	Simple_repeat	1	46	(0)	2299952
2289	20.5	8.3	8.7	chr20	25252388	25253129	(39191038)	C	MER21C	LTR/ERVL	(97)	841	1	2301902
28296	12.4	1.6	1.3	chr20	25397922	25400931	(39043236)	C	HERVK3-int	LTR/ERVK	(2946)	4256	1217	2302106
24	25.8	0.0	2.6	chr20	30290568	30290644	(34153523)	+	G-rich	Low_complexity	1	77	(0)	2304833
14	13.4	6.1	0.0	chr20	31573028	31573060	(32871107)	+	GA-rich	Low_complexity	1	35	(0)	2306294
420	23.5	1.7	8.6	chr20	32256525	32256710	(32187457)	C	L4_A_Mam	LINE/RTE-X	(3)	4987	4815	2308021
474	30.4	4.2	1.2	chr20	32256726	32256888	(32187279)	C	L3	LINE/CR1	(14)	4085	3918	2308022
46	27.1	2.6	6.6	chr20	32483590	32483856	(31960311)	+	GA-rich	Low_complexity	1	274	(0)	2308513
255	33.7	10.5	3.6	chr20	32562423	32562616	(31881551)	+	L2b	LINE/L2	2988	3196	(179)	2308682
11	30.3	0.0	2.0	chr20	32583176	32583225	(31860942)	+	(GCCGCCC)n	Simple_repeat	1	50	(0)	2308732
13	16.3	2.8	2.7	chr20	32584311	32584346	(31859821)	+	(GCCCG)n	Simple_repeat	1	37	(0)	2308737
22	28.1	0.0	0.0	chr20	32585320	32585396	(31858771)	+	(CTC)n	Simple_repeat	1	77	(0)	2308742
1038	13.6	1.2	1.2	chr20	32624233	32624394	(31819773)	C	AluSx1	SINE/Alu	(16)	296	135	2308853
228	22.2	0.0	14.3	chr20	32665590	32665673	(31778494)	C	MER33	DNA/hAT-Charlie	(0)	324	253	2308957
369	37.0	9.8	2.8	chr20	33833247	33833708	(30610459)	+	L2	LINE/L2	2483	2980	(439)	2311723
2204	10.3	3.0	0.3	chr20	34390761	34391052	(30053115)	C	AluSq2	SINE/Alu	(13)	300	1	2312994
355	26.0	2.0	2.9	chr20	34952856	34952958	(29491209)	C	Charlie22a	DNA/hAT-Charlie	(46)	445	344	2314214
895	26.8	11.6	2.7	chr20	35069957	35070268	(29373899)	+	MLT1G1	LTR/ERVL-MaLR	213	565	(14)	2314445
15	26.6	0.0	0.0	chr20	35171904	35171948	(29272219)	+	GA-rich	Low_complexity	1	45	(0)	2314694
1522	13.8	13.8	2.2	chr20	35250593	35250901	(29193266)	C	MSTA	LTR/ERVL-MaLR	(33)	395	40	2314879
503	28.7	7.6	5.1	chr20	35467793	35467943	(28976224)	+	L2c	LINE/L2	2972	3122	(265)	2315354
996	25.4	13.8	2.6	chr20	36051234	36051650	(28392517)	C	L2a	LINE/L2	(0)	3426	2956	2316727
2103	9.3	0.0	0.0	chr20	36156947	36157235	(28286932)	+	AluSc	SINE/Alu	4	292	(17)	2316980
13	31.4	2.8	1.4	chr20	36745817	36745888	(27698279)	+	(GGCGG)n	Simple_repeat	1	74	(0)	2318339
1741	15.0	0.3	7.2	chr20	36836644	36836793	(27607374)	C	AluJr	SINE/Alu	(179)	133	2	2318573
456	25.9	5.3	6.5	chr20	36847023	36847259	(27596908)	C	MIRb	SINE/MIR	(9)	259	8	2318607
346	30.1	18.1	4.2	chr20	36847267	36847554	(27596613)	+	L2b	LINE/L2	3039	3375	(0)	2318608
20	13.4	0.0	4.4	chr20	36863794	36863838	(27580329)	+	GA-rich	Low_complexity	1	45	(0)	2318641
14	10.5	6.5	0.0	chr20	36863902	36863932	(27580235)	+	(CCT)n	Simple_repeat	1	33	(0)	2318642
28	18.4	0.9	9.7	chr20	37345991	37346102	(27098065)	+	(TCC)n	Simple_repeat	1	113	(0)	2319802
12	13.0	11.9	0.0	chr20	37346084	37346125	(27098042)	+	(CTCTCT)n	Simple_repeat	1	47	(0)	2319803
1263	14.5	14.8	5.5	chr20	37693423	37693714	(26750453)	C	MER33	DNA/hAT-Charlie	(0)	324	1	2320608
270	23.8	1.2	4.5	chr20	37693715	37693753	(26750414)	+	MIRc	SINE/MIR	114	152	(116)	2320607
270	33.7	10.5	4.8	chr20	38049807	38050139	(26394028)	+	L2c	LINE/L2	2879	3237	(150)	2321318
519	33.6	3.1	6.0	chr20	38196132	38196400	(26247767)	C	L2b	LINE/L2	(2)	3373	3113	2321607
15	33.2	1.2	2.4	chr20	40688903	40688984	(23755183)	+	(CGGAG)n	Simple_repeat	1	83	(0)	2326251
393	32.3	10.2	2.4	chr20	41008137	41008627	(23435540)	+	L2b	LINE/L2	2686	3221	(154)	2326879
1209	18.1	9.6	5.2	chr20	41008699	41008753	(23435414)	C	MER33	DNA/hAT-Charlie	(0)	324	273	2326880
20	25.5	3.2	1.5	chr20	41029779	41029841	(23414326)	+	(TC)n	Simple_repeat	1	65	(0)	2326932
751	28.3	8.6	2.5	chr20	41524784	41525222	(22918945)	C	HAL1ME	LINE/L1	(1321)	1144	677	2327666
1138	16.4	3.3	4.2	chr20	44016472	44016688	(20427479)	C	MER20	DNA/hAT-Charlie	(0)	219	5	2332472
335	32.8	1.6	3.9	chr20	44016689	44016794	(20427373)	+	L2c	LINE/L2	3043	3150	(237)	2332471
698	23.3	2.2	1.1	chr20	44016809	44016986	(20427181)	+	MER96B	DNA/hAT-Tip100	3	182	(235)	2332473
869	26.9	5.7	6.4	chr20	44090097	44090517	(20353650)	+	MLT1H2	LTR/ERVL-MaLR	72	489	(0)	2332618
189	30.6	0.0	0.0	chr20	44649501	44649549	(19794618)	C	MIR3	SINE/MIR	(65)	143	95	2333988
186	24.7	8.0	12.9	chr20	44649585	44649677	(19794490)	+	MIRc	SINE/MIR	141	228	(40)	2333989
2358	10.9	0.0	0.0	chr20	44649731	44650034	(19794133)	C	AluYh3	SINE/Alu	(7)	304	1	2333990
1298	24.7	5.7	1.6	chr20	44652277	44652712	(19791455)	+	L1ME3F	LINE/L1	5631	6085	(158)	2333995
240	21.5	15.6	0.0	chr20	44728975	44729039	(19715128)	C	LTR33A	LTR/ERVL	(48)	483	407	2334200
630	29.9	8.1	0.4	chr20	44729068	44729329	(19714838)	C	LTR33A	LTR/ERVL	(161)	359	76	2334200
14	13.9	2.2	6.5	chr20	44885524	44885568	(19558599)	+	(CCCTGC)n	Simple_repeat	1	46	(0)	2334594
402	32.0	7.3	7.1	chr20	44941697	44942130	(19502037)	+	L2a	LINE/L2	2932	3426	(0)	2334708
455	34.8	11.7	1.9	chr20	44961429	44961844	(19482323)	+	L2c	LINE/L2	2920	3381	(6)	2334747
199	28.2	8.2	3.7	chr20	44961852	44961932	(19482235)	+	L2b	LINE/L2	3195	3279	(96)	2334748
226	28.2	5.3	0.0	chr20	45972689	45972785	(18471382)	C	MIR3	SINE/MIR	(97)	171	63	2336666
947	33.2	8.5	4.4	chr20	46033462	46034511	(18409656)	+	L2c	LINE/L2	2272	3387	(0)	2336825
352	24.9	18.1	7.2	chr20	46088828	46089104	(18355063)	+	MER113A	DNA/hAT-Charlie	1	314	(0)	2336898
405	29.6	7.0	4.2	chr20	46243948	46244113	(18200054)	+	MIRb	SINE/MIR	63	233	(35)	2337270
12	13.9	0.0	0.0	chr20	47359222	47359245	(17084922)	+	(CCTC)n	Simple_repeat	1	24	(0)	2339810
20	19.0	0.0	6.6	chr20	47501914	47501974	(16942193)	+	(GCG)n	Simple_repeat	1	61	(0)	2340296
1136	17.8	3.2	0.9	chr20	47989886	47990095	(16454072)	C	MER20	DNA/hAT-Charlie	(3)	216	2	2341248
604	26.2	9.9	0.0	chr20	48487483	48487673	(15956494)	+	L2a	LINE/L2	3198	3409	(17)	2342203
237	29.6	2.2	10.6	chr20	48502235	48502385	(15941782)	+	MLT2B4	LTR/ERVL	285	422	(134)	2342236
2201	16.1	15.6	1.1	chr20	49281111	49281576	(15162591)	C	LTR10B1	LTR/ERV1	(0)	547	2	2344009
1922	19.0	19.2	0.5	chr20	49287071	49287514	(15156653)	C	LTR10B1	LTR/ERV1	(0)	547	1	2344011
312	22.5	2.7	0.0	chr20	49382128	49382198	(15061969)	C	MIR3	SINE/MIR	(73)	135	63	2344274
1445	22.6	13.9	2.5	chr20	49470767	49471452	(14972715)	C	L2a	LINE/L2	(0)	3426	2641	2344512
534	29.7	6.9	4.2	chr20	49569476	49569884	(14874283)	+	L2a	LINE/L2	2879	3294	(132)	2344762
1639	18.0	2.8	1.1	chr20	49665137	49665419	(14778748)	+	AluJr4	SINE/Alu	2	289	(23)	2345007
14	22.7	1.8	5.2	chr20	50113046	50113102	(14331065)	+	(CCCCGG)n	Simple_repeat	1	58	(0)	2346105
475	27.8	4.4	1.4	chr20	50115485	50115637	(14328530)	+	MIRb	SINE/MIR	31	194	(74)	2346114
331	20.9	8.9	1.8	chr20	50115691	50115806	(14328361)	C	MIR	SINE/MIR	(0)	230	109	2346115
627	24.2	7.1	3.4	chr20	50172109	50172377	(14271790)	C	LTR33A	LTR/ERVL	(0)	520	241	2346266
463	25.7	35.2	1.8	chr20	50172373	50172756	(14271411)	+	LTR33A_	LTR/ERVL	13	527	(4)	2346267
1023	23.2	3.5	6.5	chr20	50451104	50451426	(13992741)	+	MLT1G3	LTR/ERVL-MaLR	265	577	(18)	2346967
246	32.9	3.9	0.1	chr20	50451442	50451523	(13992644)	C	MIRc	SINE/MIR	(176)	92	9	2346968
19	19.2	5.5	1.7	chr20	50731396	50731450	(13712717)	+	(GC)n	Simple_repeat	1	58	(0)	2347595
265	21.2	1.7	8.5	chr20	50981708	50981836	(13462331)	C	MER113B	DNA/hAT-Charlie	(89)	213	94	2348142
408	31.2	5.9	3.7	chr20	51828907	51829297	(12614870)	+	L2a	LINE/L2	2877	3207	(168)	2350011
77	25.2	4.0	3.2	chr20	52049612	52049742	(12394425)	+	(CCTTCT)n	Simple_repeat	1	136	(0)	2350629
297	32.6	6.0	0.7	chr20	52193933	52194074	(12250093)	C	L2a	LINE/L2	(263)	3163	3014	2350972
270	30.6	7.5	2.4	chr20	52194132	52194295	(12249872)	+	L2a	LINE/L2	3017	3189	(237)	2350973
351	29.1	17.7	3.9	chr20	53599271	53599653	(10844514)	C	L2a	LINE/L2	(42)	3384	2938	2353824
635	27.8	6.0	7.9	chr20	53610070	53610460	(10833707)	+	L1ME4c	LINE/L1	272	654	(176)	2353853
355	23.9	13.7	4.1	chr20	56359556	56359825	(8084342)	+	MER113	DNA/hAT-Charlie	176	475	(46)	2358878
1433	18.9	17.4	3.5	chr20	56948521	56948798	(7495369)	+	MLT1A1	LTR/ERVL-MaLR	2	345	(63)	2360239
18	17.9	0.0	4.2	chr20	62136866	62136913	(2307254)	+	(TTTCTT)n	Simple_repeat	1	48	(0)	2368184
16	4.5	0.0	0.0	chr20	62137116	62137138	(2307029)	+	(AGC)n	Simple_repeat	1	23	(0)	2368185
18	26.9	0.0	5.1	chr20	62652003	62652080	(1792087)	+	(CCCACC)n	Simple_repeat	1	78	(0)	2368794
19	19.2	0.0	0.0	chr20	62652215	62652250	(1791917)	+	(TG)n	Simple_repeat	1	36	(0)	2368795
193	43.2	0.0	1.0	chr20	62704611	62704706	(1739461)	C	MamRTE1	LINE/RTE-BovB	(3593)	219	125	2368854
2275	9.4	1.0	0.0	chr20	62794891	62795188	(1648979)	+	AluSx1	SINE/Alu	1	301	(11)	2368960
724	24.8	9.3	3.5	chr20	62795189	62795343	(1648824)	C	L1MB7	LINE/L1	(155)	6029	5874	2368959
853	27.6	5.2	0.0	chr20	62838170	62838497	(1605670)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	1	2368996
19	10.8	1.6	9.7	chr20	63235360	63235420	(1208747)	+	G-rich	Low_complexity	1	62	(0)	2369406
2313	8.9	0.0	4.9	chr20	63624135	63624461	(819706)	+	AluSx1	SINE/Alu	1	311	(1)	2369779
841	15.3	10.0	4.5	chr20	63657150	63657395	(786772)	C	THE1D	LTR/ERVL-MaLR	(120)	261	1	2369858
11	24.1	0.0	0.0	chr20	63740465	63740498	(703669)	+	(GGACGG)n	Simple_repeat	1	34	(0)	2369965
13	20.1	0.0	2.8	chr20	63978950	63978985	(465182)	+	(TCCG)n	Simple_repeat	1	36	(0)	2370320
261	8.8	0.0	0.0	chr21	17512330	17512363	(29197620)	C	Alu	SINE/Alu	(111)	190	157	2381774
467	23.3	4.0	2.4	chr21	26138157	26138279	(20571704)	+	L1MC5a	LINE/L1	2581	2705	(72)	2393555
24	15.8	1.7	3.3	chr21	28885363	28885422	(17824561)	+	(CATGCG)n	Simple_repeat	1	61	(0)	2397390
1030	29.4	17.3	1.6	chr21	29017645	29018592	(17691391)	C	L2a	LINE/L2	(183)	3243	2130	2397608
1726	11.4	33.9	0.9	chr21	29074836	29075155	(17634828)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2397700
11	20.7	5.1	0.0	chr21	29299293	29299331	(17410652)	+	(GCCCGCG)n	Simple_repeat	1	41	(0)	2398094
18	14.7	4.3	2.0	chr21	31344320	31344366	(15365617)	+	(CCTC)n	Simple_repeat	1	49	(0)	2401151
183	13.5	5.1	0.0	chr21	31471367	31471403	(15238580)	+	MIRc	SINE/MIR	171	209	(59)	2401413
2219	10.6	0.3	0.0	chr21	31471588	31471870	(15238113)	+	AluSp	SINE/Alu	1	284	(29)	2401414
1862	16.8	12.0	1.6	chr21	31524118	31524498	(15185485)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2401532
12	21.2	6.8	3.2	chr21	31555950	31556008	(15153975)	+	GA-rich	Low_complexity	1	63	(0)	2401590
574	28.9	5.5	1.9	chr21	31557385	31557596	(15152387)	C	MIR	SINE/MIR	(30)	232	13	2401592
13	8.9	10.5	2.4	chr21	31558695	31558732	(15151251)	+	(CCT)n	Simple_repeat	1	42	(0)	2401594
12	16.6	4.5	4.3	chr21	31872932	31872975	(14837008)	+	(CTCCGCCA)n	Simple_repeat	1	46	(0)	2402248
2415	9.1	0.0	0.0	chr21	31933503	31933800	(14776183)	+	AluSx	SINE/Alu	1	298	(14)	2402362
320	25.8	6.4	7.0	chr21	32653642	32653783	(14056200)	C	MIRc	SINE/MIR	(117)	151	11	2403560
11	16.7	5.9	0.0	chr21	32703108	32703141	(14006842)	+	(GCCTTCT)n	Simple_repeat	1	36	(0)	2403632
15	19.2	1.9	5.6	chr21	33109839	33109891	(13600092)	+	(CCTCC)n	Simple_repeat	1	54	(0)	2404327
282	29.7	8.8	1.3	chr21	33122048	33122204	(13587779)	C	MLT1M	LTR/ERVL-MaLR	(287)	385	216	2404344
16	17.2	7.4	1.7	chr21	33230305	33230358	(13479625)	+	(TCC)n	Simple_repeat	1	58	(0)	2404551
14	28.2	4.7	0.0	chr21	33230359	33230368	(13479615)	+	(TCCCTC)n	Simple_repeat	1	67	(0)	2404552
33	22.6	1.6	6.2	chr21	33642406	33642532	(13067451)	+	G-rich	Low_complexity	1	129	(0)	2405359
278	29.2	0.9	0.0	chr21	33650993	33651105	(13058878)	+	L2a	LINE/L2	3302	3415	(11)	2405378
1458	8.6	0.0	0.0	chr21	33678738	33678912	(13031071)	C	AluSx	SINE/Alu	(36)	276	102	2405437
13	16.3	2.8	2.7	chr21	33948350	33948385	(12761598)	+	(CTCCC)n	Simple_repeat	1	37	(0)	2405868
370	30.9	8.7	0.0	chr21	33971596	33971721	(12738262)	+	MIRb	SINE/MIR	4	141	(127)	2405913
1957	20.5	5.8	2.7	chr21	33971722	33972208	(12737775)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	2405914
254	7.8	9.5	2.5	chr21	33985074	33985631	(12724352)	+	(AC)n	Simple_repeat	1	611	(0)	2405938
2088	17.0	3.0	2.2	chr21	33985759	33986215	(12723768)	C	MLT1C	LTR/ERVL-MaLR	(6)	461	1	2405939
705	13.6	11.4	4.8	chr21	34199501	34199647	(12510336)	+	AluJb	SINE/Alu	144	301	(11)	2406261
329	34.2	9.9	1.6	chr21	34846475	34846671	(11863312)	C	MIR3	SINE/MIR	(1)	207	3	2407247
14	20.9	3.2	6.2	chr21	34888816	34888877	(11821106)	+	(CGC)n	Simple_repeat	1	64	(0)	2407309
1893	23.3	1.3	10.4	chr21	35745760	35746057	(10963926)	C	MER41G	LTR/ERV1	(38)	557	296	2408581
2986	15.8	3.7	6.1	chr21	36097785	36098036	(10611947)	+	MER4B-int	LTR/ERV1	4599	4840	(1918)	2409130
1011	18.3	0.0	0.0	chr21	36098042	36098210	(10611773)	C	THE1D	LTR/ERVL-MaLR	(0)	381	213	2409137
1021	11.2	5.4	1.2	chr21	36136163	36136322	(10573661)	+	AluSx	SINE/Alu	130	296	(16)	2409206
858	24.6	11.4	2.7	chr21	36161999	36162201	(10547782)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	139	2409267
1903	16.2	2.7	0.0	chr21	36162202	36162485	(10547498)	C	AluJb	SINE/Alu	(19)	293	2	2409268
457	30.4	7.3	2.4	chr21	36500848	36501056	(10208927)	C	MIRb	SINE/MIR	(3)	265	46	2410003
18	20.9	0.0	0.0	chr21	36699025	36699068	(10010915)	+	(CCGCCC)n	Simple_repeat	1	44	(0)	2410355
238	27.5	1.4	0.0	chr21	36967418	36967486	(9742497)	C	L4_A_Mam	LINE/RTE-X	(182)	4808	4739	2410752
713	26.9	8.1	5.1	chr21	36974015	36974393	(9735590)	C	LTR33A_	LTR/ERVL	(108)	423	15	2410770
2169	15.3	9.3	0.2	chr21	37145599	37145991	(9563992)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2411080
3456	16.1	9.9	11.6	chr21	37145992	37146155	(9563828)	+	L1MB7	LINE/L1	5617	5823	(360)	2411079
408	31.0	4.4	2.5	chr21	37258211	37258412	(9451571)	+	LTR51	LTR/ERV1	228	433	(238)	2411248
13	21.7	0.0	0.0	chr21	37366867	37366898	(9343085)	+	(GGC)n	Simple_repeat	1	32	(0)	2411469
27	23.2	0.0	0.0	chr21	37366986	37367047	(9342936)	+	(GCT)n	Simple_repeat	1	62	(0)	2411470
1230	20.5	4.0	0.4	chr21	37375874	37376113	(9333870)	+	LTR1F1	LTR/ERV1	67	315	(414)	2411488
541	25.7	0.0	2.8	chr21	37451641	37451784	(9258199)	+	Tigger3c	DNA/TcMar-Tigger	454	593	(9)	2411623
474	31.9	3.7	0.3	chr21	37564796	37564960	(9145023)	C	MIRb	SINE/MIR	(92)	176	4	2411793
836	27.0	12.3	3.1	chr21	38798222	38798611	(7911372)	C	L2a	LINE/L2	(4)	3422	2992	2413532
436	23.0	3.4	0.0	chr21	38798675	38798787	(7911196)	C	L2a	LINE/L2	(530)	2889	2773	2413532
60	22.7	2.3	5.4	chr21	38805637	38805854	(7904129)	+	(CCCCT)n	Simple_repeat	1	223	(0)	2413543
28	3.3	0.0	0.0	chr21	38805860	38805890	(7904093)	+	(TCCCTCC)n	Simple_repeat	1	31	(0)	2413544
1735	21.8	10.7	0.9	chr21	38987515	38987935	(7722048)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	2413821
18	9.7	3.0	0.0	chr21	39183299	39183331	(7526652)	+	(CCT)n	Simple_repeat	1	34	(0)	2414124
750	29.8	10.0	1.8	chr21	39320042	39320325	(7389658)	+	LTR33	LTR/ERVL	33	342	(173)	2414348
18	18.4	2.3	0.0	chr21	39348737	39348779	(7361204)	+	(CGCC)n	Simple_repeat	1	44	(0)	2414409
2483	17.0	3.2	3.4	chr21	39401610	39402079	(7307904)	+	Tigger1	DNA/TcMar-Tigger	1	469	(1949)	2414527
1435	28.1	4.1	0.8	chr21	39444580	39445075	(7264908)	C	L2	LINE/L2	(648)	2771	2259	2414609
23	13.0	0.0	0.0	chr21	41420268	41420309	(5289674)	+	(GCGGGC)n	Simple_repeat	1	42	(0)	2417419
772	18.6	3.1	6.0	chr21	41678981	41679180	(5030803)	+	MLT1H	LTR/ERVL-MaLR	1	194	(355)	2417845
189	28.6	10.6	4.5	chr21	41679215	41679302	(5030681)	C	MIRb	SINE/MIR	(143)	125	32	2417846
2288	8.2	0.0	2.2	chr21	41783093	41783407	(4926576)	C	AluSx	SINE/Alu	(4)	308	1	2417995
24	13.9	3.4	3.3	chr21	42258613	42258671	(4451312)	+	(TCCA)n	Simple_repeat	1	61	(0)	2418658
225	20.9	21.4	2.6	chr21	42516320	42516432	(4193551)	+	MIRc	SINE/MIR	70	209	(59)	2418992
2916	18.7	6.6	3.7	chr21	42524753	42525562	(4184421)	+	MER21C	LTR/ERVL	3	933	(5)	2419003
390	29.4	8.7	3.5	chr21	42673098	42673271	(4036712)	C	MIRb	SINE/MIR	(74)	194	12	2419165
34842	11.6	3.3	2.9	chr21	42922766	42924948	(3785035)	C	HERVH48-int	LTR/ERV1	(4147)	2507	256	2419570
8795	13.3	10.0	2.6	chr21	42977844	42978028	(3731955)	C	Tigger1	DNA/TcMar-Tigger	(1605)	813	642	2419665
1931	13.4	4.5	0.0	chr21	42978029	42978304	(3731679)	C	AluSz	SINE/Alu	(23)	289	1	2419667
17	9.9	0.0	5.6	chr21	43606425	43606460	(3103523)	+	GA-rich	Low_complexity	1	36	(0)	2420491
1601	19.0	0.0	3.5	chr21	43608688	43608998	(3100985)	+	AluJo	SINE/Alu	9	308	(4)	2420494
5739	12.8	0.4	2.9	chr21	43608999	43609444	(3100539)	+	L1PA17	LINE/L1	5729	6157	(9)	2420492
2511	6.8	0.7	0.0	chr21	43660282	43660591	(3049392)	+	AluSp	SINE/Alu	1	312	(1)	2420582
255	30.8	11.5	2.1	chr21	43660696	43660842	(3049141)	C	L2c	LINE/L2	(326)	3061	2900	2420583
14	18.2	0.0	0.0	chr21	43728590	43728620	(2981363)	+	(TGTC)n	Simple_repeat	1	31	(0)	2420708
12	10.4	6.1	2.9	chr21	43729052	43729084	(2980899)	+	(GCCC)n	Simple_repeat	1	35	(0)	2420709
2830	8.1	1.6	0.3	chr21	43771602	43771971	(2938012)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2420771
17	12.6	2.9	0.0	chr21	43776445	43776479	(2933504)	+	G-rich	Low_complexity	1	36	(0)	2420779
2123	13.4	0.7	1.6	chr21	43857616	43857928	(2852055)	+	AluSq2	SINE/Alu	2	311	(2)	2420936
12753	13.3	0.8	2.4	chr21	43893111	43894066	(2815917)	C	Tigger1	DNA/TcMar-Tigger	(1451)	967	15	2420995
858	25.3	6.5	9.6	chr21	43913847	43914177	(2795806)	C	Charlie1a	DNA/hAT-Charlie	(91)	1364	1042	2421033
1681	13.0	2.3	8.4	chr21	44011439	44011761	(2698222)	+	AluJb	SINE/Alu	1	303	(9)	2421179
890	26.5	6.2	5.0	chr21	44021634	44021951	(2688032)	+	MLT1A	LTR/ERVL-MaLR	1	322	(52)	2421200
18	13.6	4.9	0.0	chr21	44299576	44299616	(2410367)	+	G-rich	Low_complexity	1	43	(0)	2421590
1133	24.7	8.1	0.0	chr21	44836551	44836902	(1873081)	+	MLT1B	LTR/ERVL-MaLR	1	383	(7)	2422221
234	24.4	3.7	1.3	chr21	45322479	45322557	(1387426)	C	L1M7	LINE/L1	(3996)	2222	2142	2422742
351	26.2	9.3	1.5	chr21	45333691	45333888	(1376095)	+	L2a	LINE/L2	2958	3172	(254)	2422753
14	7.2	6.9	0.0	chr21	45349976	45350004	(1359979)	+	(GTGCGT)n	Simple_repeat	1	31	(0)	2422771
288	15.4	13.0	2.6	chr21	46253743	46253819	(456164)	+	MSTA	LTR/ERVL-MaLR	114	215	(213)	2423675
281	16.3	7.1	0.9	chr21	46253862	46253939	(456044)	+	THE1D	LTR/ERVL-MaLR	114	192	(183)	2423676
20	9.7	0.0	2.8	chr21	46295476	46295511	(414472)	+	(CCT)n	Simple_repeat	1	36	(0)	2423745
13	4.1	8.0	0.0	chr21	46325382	46325406	(384577)	+	(GGAG)n	Simple_repeat	1	27	(0)	2423814
22589	12.3	2.2	0.6	chr21	46585548	46587567	(122416)	+	L1PB1	LINE/L1	1098	3260	(3602)	2424159
1927	14.6	2.7	0.3	chr22	16604675	16604962	(34213506)	C	AluSx	SINE/Alu	(16)	296	2	2427589
12	22.7	0.0	0.0	chr22	16718087	16718118	(34100350)	+	(CTTTC)n	Simple_repeat	1	32	(0)	2427720
888	25.3	17.4	2.3	chr22	19422301	19422710	(31395758)	+	L2a	LINE/L2	2650	3121	(305)	2431976
1247	26.6	4.0	4.0	chr22	19422711	19423137	(31395331)	+	LTR16	LTR/ERVL	1	427	(11)	2431980
19	21.5	0.0	8.0	chr22	19478991	19479065	(31339403)	+	(CCGCC)n	Simple_repeat	1	75	(0)	2432066
18	10.7	4.5	4.3	chr22	19479140	19479183	(31339285)	+	(CCG)n	Simple_repeat	1	46	(0)	2432067
2071	18.5	6.7	2.8	chr22	19942683	19943183	(30875285)	C	MER67A	LTR/ERV1	(21)	522	1	2432714
818	24.7	2.9	5.3	chr22	19943187	19943365	(30875103)	C	MER31-int	LTR/ERV1	(24)	4912	4731	2432714
225	28.7	2.8	1.5	chr22	19974414	19974516	(30843952)	C	MIRc	SINE/MIR	(78)	152	53	2432764
4676	11.7	8.7	4.6	chr22	20235521	20236321	(30582147)	+	LTR1A2	LTR/ERV1	1	837	(0)	2433033
267	28.9	2.4	1.2	chr22	20410291	20410374	(30408094)	C	L1ME4a	LINE/L1	(433)	5691	5607	2433256
332	28.4	3.3	4.1	chr22	20410536	20410656	(30407812)	C	L1ME4a	LINE/L1	(695)	5429	5310	2433256
1248	19.5	11.4	0.0	chr22	20418406	20418662	(30399806)	+	7SLRNA	srpRNA	14	303	(17)	2433283
391	9.6	0.0	0.0	chr22	20418674	20418725	(30399743)	+	AluSz6	SINE/Alu	175	226	(86)	2433284
234	32.2	11.4	3.2	chr22	20437106	20437385	(30381083)	+	L2b	LINE/L2	2931	3237	(150)	2433314
735	23.0	1.7	1.7	chr22	20787414	20787590	(30030878)	C	MER105	DNA/hAT-Charlie	(1)	202	26	2433930
216	34.1	7.1	0.0	chr22	21001558	21001648	(29816820)	C	MIR	SINE/MIR	(126)	136	39	2434375
208	19.4	0.0	0.0	chr22	21045593	21045628	(29772840)	+	MIRb	SINE/MIR	16	51	(217)	2434450
276	36.6	10.8	2.5	chr22	21643165	21643486	(29174982)	C	L2c	LINE/L2	(5)	3382	3031	2435591
1421	16.9	23.9	0.6	chr22	21754450	21754789	(29063679)	C	MSTB	LTR/ERVL-MaLR	(1)	425	7	2435832
14	8.8	0.0	0.0	chr22	23219069	23219092	(27599376)	+	(ATGG)n	Simple_repeat	1	24	(0)	2437967
936	21.5	13.3	4.8	chr22	23722235	23722416	(27096052)	+	MSTB	LTR/ERVL-MaLR	55	253	(128)	2438804
417	10.1	0.0	13.2	chr22	23722417	23722507	(27095961)	+	MER4A	LTR/ERV1	1	79	(585)	2438807
212	29.3	11.5	1.6	chr22	26512712	26512836	(24305632)	+	MIR	SINE/MIR	80	218	(44)	2444474
12	23.1	5.1	3.2	chr22	26657361	26657419	(24161049)	+	G-rich	Low_complexity	1	62	(0)	2444877
13	23.2	0.0	4.4	chr22	27212578	27212622	(23605846)	+	A-rich	Low_complexity	1	45	(0)	2446213
723	25.3	4.9	0.8	chr22	27377941	27378175	(23440293)	C	MIRb	SINE/MIR	(19)	249	5	2446546
431	25.6	19.2	2.2	chr22	27913201	27913428	(22905040)	C	Tigger15a	DNA/TcMar-Tigger	(242)	473	198	2447721
25	27.8	3.2	5.5	chr22	28679779	28679936	(22138532)	+	(CGCGCCC)n	Simple_repeat	1	163	(0)	2448922
258	30.5	10.5	4.9	chr22	28750324	28750485	(22067983)	C	MIRc	SINE/MIR	(35)	173	2	2449101
301	24.2	0.0	0.0	chr22	28750509	28750570	(22067898)	+	MIR3	SINE/MIR	29	90	(118)	2449102
358	19.5	2.2	6.5	chr22	28869653	28869745	(21948723)	+	L1ME3Cz	LINE/L1	433	521	(476)	2449452
510	21.0	10.1	4.1	chr22	28869721	28869914	(21948554)	+	L1MC5a	LINE/L1	2568	2774	(3)	2449453
12	13.0	8.8	0.0	chr22	29004719	29004767	(21813701)	+	GA-rich	Low_complexity	1	53	(0)	2449717
185	26.8	1.8	0.0	chr22	29316025	29316080	(21502388)	+	MIR3	SINE/MIR	81	137	(71)	2450311
227	33.0	0.0	0.0	chr22	29553259	29553349	(21265119)	+	MER113	DNA/hAT-Charlie	431	521	(0)	2450824
242	25.1	9.8	1.5	chr22	29553838	29553941	(21264527)	+	L2a	LINE/L2	3260	3423	(3)	2450826
192	30.3	13.8	2.6	chr22	29621734	29621926	(21196542)	+	L2c	LINE/L2	2925	3142	(245)	2451014
328	30.6	1.0	3.0	chr22	29621931	29622031	(21196437)	C	MIRb	SINE/MIR	(164)	104	6	2451007
217	24.1	7.9	0.0	chr22	29733705	29733762	(21084706)	+	MIRc	SINE/MIR	87	149	(119)	2451193
298	32.4	7.1	0.0	chr22	29893006	29893110	(20925358)	+	L2a	LINE/L2	3304	3416	(10)	2451590
2282	9.7	0.3	0.0	chr22	29913751	29914049	(20904419)	C	AluSc8	SINE/Alu	(11)	300	1	2451639
2452	23.6	7.9	3.9	chr22	29914050	29914818	(20903650)	C	L1ME1	LINE/L1	(447)	5905	5090	2451638
904	17.9	2.6	2.1	chr22	30696351	30696538	(20121930)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	2453202
548	23.9	4.3	2.5	chr22	31350744	31350902	(19467566)	C	L2a	LINE/L2	(0)	3426	3265	2454559
273	32.4	9.2	1.4	chr22	31351055	31351195	(19467273)	C	HAL1b	LINE/L1	(29)	2392	2240	2454560
471	32.4	1.4	0.0	chr22	31967462	31967606	(18850862)	C	MIRb	SINE/MIR	(117)	151	5	2456051
3206	25.1	6.8	5.5	chr22	32203087	32206587	(18611881)	C	REP522	Satellite/telo	(94)	3546	1	2456556
596	27.9	10.3	0.9	chr22	35257128	35257355	(15561113)	+	MIRb	SINE/MIR	2	253	(15)	2462579
490	29.0	6.3	0.0	chr22	35355736	35355865	(15462603)	+	LTR78B	LTR/ERV1	1110	1251	(45)	2462766
12	11.3	6.9	0.0	chr22	36028709	36028737	(14789731)	+	(CCCGC)n	Simple_repeat	1	31	(0)	2464175
17	17.9	2.6	0.0	chr22	36028932	36028970	(14789498)	+	G-rich	Low_complexity	1	40	(0)	2464176
2100	11.7	2.4	0.0	chr22	36353369	36353651	(14464817)	C	AluSx1	SINE/Alu	(20)	292	3	2464807
228	35.3	8.1	0.0	chr22	36370892	36371027	(14447441)	C	MIRb	SINE/MIR	(15)	253	106	2464844
1952	16.2	2.6	3.4	chr22	36371143	36371526	(14446942)	+	MLT1B	LTR/ERVL-MaLR	1	381	(9)	2464845
456	31.7	0.0	5.3	chr22	36445352	36445521	(14372947)	+	MER117	DNA/hAT-Charlie	1	161	(36)	2465067
14	13.4	5.9	0.0	chr22	36445628	36445661	(14372807)	+	GA-rich	Low_complexity	1	36	(0)	2465068
833	14.8	12.1	6.3	chr22	36445825	36446018	(14372450)	C	MLT1A0	LTR/ERVL-MaLR	(52)	376	142	2465069
301	22.0	13.0	1.0	chr22	36451738	36451838	(14366630)	+	MER112	DNA/hAT-Charlie	146	260	(1)	2465085
547	23.2	1.6	0.0	chr22	37020459	37020583	(13797885)	C	MER63D	DNA/hAT-Blackjack	(908)	153	27	2466327
468	22.8	3.9	6.1	chr22	37346029	37346159	(13472309)	+	MIRb	SINE/MIR	107	234	(34)	2467036
351	26.6	7.2	1.5	chr22	37377176	37377305	(13441163)	C	MIR1_Amn	SINE/MIR	(66)	164	27	2467086
15	10.3	3.0	2.9	chr22	37377424	37377456	(13441012)	+	(CCT)n	Simple_repeat	1	34	(0)	2467087
228	30.1	0.0	6.1	chr22	37429012	37429110	(13389358)	+	L2c	LINE/L2	3264	3356	(31)	2467214
205	32.0	3.9	6.2	chr22	37499285	37499414	(13319054)	+	MIR1_Amn	SINE/MIR	16	142	(88)	2467370
13	4.5	0.0	7.4	chr22	37499490	37499516	(13318952)	+	(CCAC)n	Simple_repeat	1	27	(0)	2467371
253	28.6	6.7	3.8	chr22	37499601	37499732	(13318736)	+	L2b	LINE/L2	3081	3221	(166)	2467372
552	29.6	5.5	0.0	chr22	37514998	37515169	(13303299)	+	MIRb	SINE/MIR	21	202	(66)	2467406
2285	10.2	0.3	0.0	chr22	37527021	37527315	(13291153)	+	AluSx1	SINE/Alu	1	296	(16)	2467438
952	19.7	15.5	5.5	chr22	37527316	37527701	(13290767)	C	LTR54	LTR/ERV1	(41)	469	1	2467437
15	18.1	0.0	0.0	chr22	37539055	37539086	(13279382)	+	GA-rich	Low_complexity	1	32	(0)	2467473
187	22.4	10.8	6.5	chr22	37539106	37539167	(13279301)	C	L2c	LINE/L2	(30)	3357	3293	2467474
12	21.6	0.0	0.0	chr22	37639593	37639624	(13178844)	+	G-rich	Low_complexity	1	32	(0)	2467707
12	9.7	0.0	0.0	chr22	37657993	37658014	(13160454)	+	(AACC)n	Simple_repeat	1	22	(0)	2467750
11	14.0	0.0	8.1	chr22	37675389	37675425	(13143043)	+	(GGAGAT)n	Simple_repeat	1	37	(0)	2467797
16	0.0	0.0	0.0	chr22	37746216	37746232	(13072236)	+	(A)n	Simple_repeat	1	17	(0)	2467968
27	8.9	1.9	3.8	chr22	37746284	37746335	(13072133)	+	(CGG)n	Simple_repeat	1	53	(0)	2467969
477	30.2	8.0	0.0	chr22	37747689	37747860	(13070608)	C	MIRb	SINE/MIR	(32)	236	50	2467971
30	3.1	0.0	0.0	chr22	37805259	37805291	(13013177)	+	(GAGGCA)n	Simple_repeat	1	33	(0)	2468119
16	20.7	0.0	4.2	chr22	37905344	37905391	(12913077)	+	(GGCT)n	Simple_repeat	1	48	(0)	2468377
353	31.2	0.0	1.5	chr22	38148358	38148487	(12669981)	+	L1MEg	LINE/L1	1	128	(5956)	2468903
1361	29.3	4.3	6.0	chr22	38148550	38148859	(12669609)	+	L1MEg	LINE/L1	236	539	(5545)	2468903
199	28.0	4.7	4.7	chr22	38270139	38270224	(12548244)	+	L2b	LINE/L2	3030	3115	(260)	2469143
557	26.5	2.7	0.2	chr22	38270299	38270454	(12548014)	+	MIR	SINE/MIR	109	262	(0)	2469144
1716	27.3	8.5	5.0	chr22	38274683	38275089	(12543379)	+	L2a	LINE/L2	2814	3241	(185)	2469149
1564	26.4	9.2	3.5	chr22	38305329	38306243	(12512225)	+	L1ME4b	LINE/L1	10	743	(149)	2469218
420	23.4	10.0	6.3	chr22	38321066	38321317	(12497151)	+	L2a	LINE/L2	2896	3166	(260)	2469254
2304	9.9	0.0	0.3	chr22	38321320	38321622	(12496846)	C	AluSx1	SINE/Alu	(8)	304	3	2469255
21	30.2	2.1	2.0	chr22	38398893	38399009	(12419459)	+	(CGCCC)n	Simple_repeat	1	117	(0)	2469396
263	28.6	7.8	2.5	chr22	38788324	38788445	(12030023)	C	Charlie18a	DNA/hAT-Charlie	(166)	176	48	2470266
21	11.7	1.9	5.7	chr22	38788455	38788506	(12029962)	+	G-rich	Low_complexity	1	53	(0)	2470267
19	24.6	6.8	1.1	chr22	38872227	38872314	(11946154)	+	(GCGCGC)n	Simple_repeat	1	94	(0)	2470438
554	27.4	11.8	5.2	chr22	39179673	39180138	(11638330)	C	L2a	LINE/L2	(785)	2634	2134	2471062
17	25.5	1.0	8.8	chr22	39205338	39205438	(11613030)	+	(ACATGC)n	Simple_repeat	1	102	(0)	2471119
673	27.2	11.4	9.8	chr22	39341110	39341754	(11476714)	C	L1MEi	LINE/L1	(1505)	707	53	2471425
887	29.7	13.1	0.9	chr22	39490030	39490480	(11327988)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	6	2471752
452	31.1	15.5	1.6	chr22	39500997	39501307	(11317161)	+	L2	LINE/L2	2720	3081	(338)	2471782
211	33.3	7.3	6.0	chr22	39501366	39501499	(11316969)	C	MIR	SINE/MIR	(99)	163	28	2471783
980	17.1	1.9	0.0	chr22	39518474	39518631	(11299837)	C	FRAM	SINE/Alu	(15)	161	1	2471812
206	30.9	0.0	5.6	chr22	39523596	39523667	(11294801)	C	MIRb	SINE/MIR	(38)	230	163	2471817
209	24.2	3.2	10.8	chr22	39524504	39524605	(11293863)	C	MIR3	SINE/MIR	(13)	195	102	2471821
316	27.2	13.6	1.5	chr22	39524718	39524973	(11293495)	+	L2a	LINE/L2	2932	3393	(33)	2471822
958	30.9	6.7	3.5	chr22	39530754	39531056	(11287412)	C	L2a	LINE/L2	(434)	2985	2666	2471829
268	29.4	1.4	0.0	chr22	40177344	40177425	(10641043)	+	MIRc	SINE/MIR	37	129	(139)	2473081
27	18.0	0.0	0.0	chr22	40177925	40177974	(10640494)	+	GA-rich	Low_complexity	1	50	(0)	2473082
2037	25.4	3.3	3.6	chr22	40198587	40199190	(10619278)	+	L1MC4	LINE/L1	6458	7059	(983)	2473115
2105	12.0	0.7	1.0	chr22	40345621	40345928	(10472540)	C	AluSx	SINE/Alu	(4)	308	2	2473375
870	11.4	0.0	2.3	chr22	40346118	40346272	(10472196)	C	FLAM_C	SINE/Alu	(0)	143	1	2473376
2197	16.3	8.0	5.1	chr22	40412067	40412853	(10405615)	+	L1MB3	LINE/L1	5221	6137	(46)	2473511
995	17.1	27.2	0.0	chr22	40534453	40534669	(10283799)	C	AluJb	SINE/Alu	(10)	302	5	2473747
468	27.2	17.8	3.1	chr22	40654509	40654732	(10163736)	+	MIRc	SINE/MIR	1	264	(4)	2474021
199	22.2	8.0	9.0	chr22	40654808	40654896	(10163572)	C	MIRc	SINE/MIR	(145)	123	36	2474022
795	21.1	13.0	5.9	chr22	40666519	40666911	(10151557)	+	LTR56	LTR/ERV1	43	445	(0)	2474056
940	14.9	0.0	0.0	chr22	41001996	41002129	(9816339)	C	AluJb	SINE/Alu	(5)	307	174	2474867
17	9.4	2.6	5.1	chr22	41092447	41092484	(9725984)	+	(GCG)n	Simple_repeat	1	39	(0)	2475139
14	25.3	1.8	3.6	chr22	41092589	41092643	(9725825)	+	GA-rich	Low_complexity	1	56	(0)	2475140
12	21.7	0.0	0.0	chr22	41092658	41092689	(9725779)	+	(GGCCG)n	Simple_repeat	1	32	(0)	2475141
393	32.6	5.8	2.0	chr22	41355014	41355210	(9463258)	C	L2c	LINE/L2	(185)	3202	2998	2475730
20	19.4	1.2	8.3	chr22	41381289	41381371	(9437097)	+	(CCCGC)n	Simple_repeat	1	84	(0)	2475778
376	32.8	4.9	3.8	chr22	41411676	41412010	(9406458)	+	L2c	LINE/L2	2937	3346	(41)	2475851
18	17.7	0.0	0.0	chr22	41436043	41436074	(9382394)	+	A-rich	Low_complexity	1	32	(0)	2475916
15	13.5	0.0	10.0	chr22	41448444	41448493	(9369975)	+	(CCCCCT)n	Simple_repeat	1	50	(0)	2475930
12	18.4	7.7	0.0	chr22	41448469	41448507	(9369961)	+	(CCTTC)n	Simple_repeat	1	42	(0)	2475931
232	27.8	5.0	6.4	chr22	41563493	41563602	(9254866)	C	MIR3	SINE/MIR	(84)	146	35	2476206
441	28.5	4.3	8.2	chr22	41563707	41563790	(9254678)	+	MIRb	SINE/MIR	74	159	(109)	2476207
2142	13.6	0.0	1.3	chr22	41780569	41780877	(9037591)	C	AluJb	SINE/Alu	(0)	312	8	2476758
260	30.0	0.7	15.7	chr22	41780878	41780974	(9037494)	C	L2c	LINE/L2	(258)	3129	3049	2476757
1065	22.6	16.3	0.1	chr22	42072664	42073358	(8745110)	+	L2a	LINE/L2	2408	3259	(167)	2477373
293	28.4	11.8	6.9	chr22	42269010	42269153	(8549315)	C	MIR3	SINE/MIR	(78)	152	1	2477692
39	23.8	4.6	5.4	chr22	42303765	42303959	(8514509)	+	G-rich	Low_complexity	1	204	(0)	2477763
2338	11.3	0.0	0.0	chr22	42313591	42313899	(8504569)	C	AluSz	SINE/Alu	(3)	309	1	2477779
337	20.8	0.0	4.3	chr22	42313910	42314016	(8504452)	+	L2a	LINE/L2	3025	3126	(249)	2477780
203	30.7	1.1	6.4	chr22	42314007	42314100	(8504368)	+	L2a	LINE/L2	3265	3353	(22)	2477780
16	0.0	6.9	3.2	chr22	42318418	42318446	(8500022)	+	(GAG)n	Simple_repeat	1	31	(0)	2477789
202	28.1	0.0	7.2	chr22	42655723	42655791	(8162677)	C	L2c	LINE/L2	(18)	3369	3306	2478594
624	29.7	6.2	0.0	chr22	43263988	43264182	(7554286)	C	MER63A	DNA/hAT-Blackjack	(1)	209	2	2479898
316	27.9	12.0	5.5	chr22	43385994	43386156	(7432312)	+	MIRb	SINE/MIR	52	226	(42)	2480137
2350	10.6	0.0	0.0	chr22	44351447	44351749	(6466719)	+	AluSq2	SINE/Alu	1	303	(10)	2481818
20	9.8	0.0	0.0	chr22	45008890	45008922	(5809546)	+	(GTGAGT)n	Simple_repeat	1	33	(0)	2483034
2024	11.2	0.0	0.8	chr22	45229812	45230079	(5588389)	+	AluSx1	SINE/Alu	1	266	(46)	2483482
11	20.1	2.9	0.0	chr22	45230133	45230166	(5588302)	+	(ACAGCC)n	Simple_repeat	1	35	(0)	2483483
233	22.6	13.8	3.6	chr22	45538456	45538565	(5279903)	C	L1ME3G	LINE/L1	(246)	678	556	2484135
222	31.1	8.5	3.6	chr22	46075361	46075527	(4742941)	+	MIRb	SINE/MIR	2	177	(91)	2484975
16	7.8	0.0	3.5	chr22	47195964	47195992	(3622476)	+	(GGAG)n	Simple_repeat	1	29	(0)	2486518
18	11.1	2.3	4.5	chr22	49962317	49962359	(856109)	+	(CCCT)n	Simple_repeat	1	44	(0)	2490004
15	24.4	3.8	0.0	chr22	49962360	49962365	(856103)	+	(GCTCCCC)n	Simple_repeat	5	55	(0)	2490005
2148	14.7	17.8	0.0	chr22	50001993	50002388	(816080)	+	MER51E	LTR/ERV1	1	482	(0)	2490050
195	30.6	9.4	4.6	chr22	50268673	50268823	(549645)	+	L2b	LINE/L2	3033	3191	(184)	2490385
13	20.4	3.6	5.2	chr22	50271781	50271836	(546632)	+	(CCGCGG)n	Simple_repeat	1	58	(0)	2490390
24	20.2	7.4	2.0	chr22	50314497	50314595	(503873)	+	(AGGCAG)n	Simple_repeat	1	104	(0)	2490428
546	21.8	29.2	4.0	chr22	50342271	50342602	(475866)	C	LTR41	LTR/ERVL	(308)	460	5	2490487
239	16.1	6.7	0.0	chr3	4491849	4491904	(193803655)	C	MIR1_Amn	SINE/MIR	(89)	141	82	2499105
330	30.9	6.3	1.7	chr3	4491957	4492137	(193803422)	+	MIRb	SINE/MIR	25	214	(54)	2499106
16	0.0	0.0	0.0	chr3	9399828	9399844	(188895715)	+	(A)n	Simple_repeat	1	17	(0)	2507137
360	27.9	8.3	2.6	chr3	9421036	9421149	(188874410)	C	MIRc	SINE/MIR	(88)	180	60	2507168
888	30.3	11.4	3.4	chr3	9888955	9889452	(188406107)	+	L2b	LINE/L2	2798	3363	(12)	2508183
2693	20.6	3.8	0.0	chr3	10703690	10704224	(187591335)	+	MER74A	LTR/ERVL	1	556	(2)	2509945
428	24.0	4.0	1.6	chr3	11154993	11155115	(187140444)	C	MIRc	SINE/MIR	(110)	158	33	2510878
16	19.4	3.4	4.9	chr3	11995166	11995224	(186300335)	+	(CTGCAG)n	Simple_repeat	1	61	(0)	2512510
532	26.9	7.0	1.2	chr3	12483442	12483603	(185811956)	C	L2c	LINE/L2	(191)	3196	3025	2513361
265	27.7	4.3	2.6	chr3	12558868	12558983	(185736576)	C	MIR1_Amn	SINE/MIR	(32)	176	60	2513527
233	17.6	17.1	0.0	chr3	12559019	12559086	(185736473)	+	MER103C	DNA/hAT-Charlie	83	164	(133)	2513528
798	26.9	2.6	1.3	chr3	12921502	12921727	(185373832)	C	MIR	SINE/MIR	(24)	238	10	2514316
181	25.6	5.3	9.1	chr3	12921841	12921939	(185373620)	+	MIRc	SINE/MIR	99	193	(75)	2514317
490	26.2	17.3	2.4	chr3	13021409	13021619	(185273940)	C	MIR	SINE/MIR	(1)	261	13	2514494
202	14.7	0.0	0.0	chr3	13576571	13576604	(184718955)	C	L2c	LINE/L2	(232)	3155	3122	2515544
364	29.6	5.8	1.2	chr3	14289702	14289865	(184005694)	+	Charlie30a	DNA/hAT-Charlie	138	309	(482)	2516620
442	25.7	11.2	6.6	chr3	14458194	14458389	(183837170)	C	MER63A	DNA/hAT-Blackjack	(2)	208	3	2516997
16	10.8	3.3	0.0	chr3	14948240	14948269	(183347290)	+	(CTC)n	Simple_repeat	1	31	(0)	2517905
2290	13.1	3.5	5.3	chr3	15054881	15055316	(183240243)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2518089
793	15.3	0.6	1.1	chr3	15186487	15186664	(183108895)	+	L1M3	LINE/L1	3242	3418	(2722)	2518345
26453	2.3	0.1	0.1	chr3	15186666	15192699	(183102860)	+	L1PA3	LINE/L1	124	6152	(3)	2518346
3971	19.7	4.3	2.4	chr3	15775291	15776138	(182519421)	C	MER21B	LTR/ERVL	(0)	868	4	2519388
15	14.1	0.0	3.0	chr3	15859706	15859738	(182435821)	+	(CCG)n	Simple_repeat	1	33	(0)	2519514
12	18.8	2.6	2.6	chr3	16149075	16149112	(182146447)	+	(CAGCC)n	Simple_repeat	1	39	(0)	2520030
2202	16.1	2.7	0.3	chr3	16533843	16534209	(181761350)	C	MSTB1	LTR/ERVL-MaLR	(40)	392	17	2520660
312	29.1	9.0	6.5	chr3	17742106	17742322	(180553237)	+	L1MDb	LINE/L1	537	759	(5650)	2522303
18	6.4	2.7	5.3	chr3	17742520	17742559	(180553000)	+	(TCC)n	Simple_repeat	1	38	(0)	2522304
15	27.6	0.0	2.0	chr3	18424563	18424612	(179870947)	+	GA-rich	Low_complexity	1	50	(0)	2523265
14	9.6	0.0	0.0	chr3	20040191	20040213	(178255346)	+	(GGC)n	Simple_repeat	1	23	(0)	2525555
12	16.8	4.5	4.3	chr3	22893253	22893296	(175402263)	+	A-rich	Low_complexity	1	46	(0)	2529322
15008	11.2	10.3	1.0	chr3	23019620	23021447	(175274112)	+	L1PB1	LINE/L1	4	1960	(4903)	2529544
635	31.7	6.2	4.1	chr3	23735815	23736290	(174559269)	C	LTR16A2	LTR/ERVL	(4)	491	1	2530655
335	31.6	0.0	2.5	chr3	23784766	23784885	(174510674)	+	MER5A	DNA/hAT-Charlie	73	189	(0)	2530766
18	22.6	8.3	1.1	chr3	23806890	23806973	(174488586)	+	(CCTGC)n	Simple_repeat	1	91	(0)	2530814
1174	16.0	3.2	4.1	chr3	23877411	23877631	(174417928)	C	MER20	DNA/hAT-Charlie	(0)	219	1	2530936
730	25.2	19.1	1.6	chr3	23915502	23916073	(174379486)	+	L2a	LINE/L2	2731	3426	(0)	2531001
12	16.9	0.0	0.0	chr3	24494523	24494549	(173801010)	+	(CGCC)n	Simple_repeat	1	27	(0)	2531964
12	8.1	3.6	3.5	chr3	24495702	24495729	(173799830)	+	(GCCCG)n	Simple_repeat	1	29	(0)	2531968
3776	25.9	8.6	5.9	chr3	24652349	24652764	(173642795)	C	L1MEg	LINE/L1	(1747)	4399	3987	2532205
230	32.6	1.3	5.8	chr3	25790364	25790519	(172505040)	C	MIR3	SINE/MIR	(37)	171	23	2533815
180	19.1	0.0	4.5	chr3	29280827	29280870	(169014689)	C	MamRTE1	LINE/RTE-BovB	(437)	3375	3334	2538964
20	9.7	0.0	2.8	chr3	31532887	31532922	(166762637)	+	(CCT)n	Simple_repeat	1	36	(0)	2542253
17	11.2	0.0	0.0	chr3	31981315	31981343	(166314216)	+	(AGG)n	Simple_repeat	1	29	(0)	2542979
467	32.4	6.7	3.1	chr3	32037677	32037995	(166257564)	+	L1M6	LINE/L1	681	1011	(5485)	2543089
237	29.1	7.4	4.9	chr3	32501288	32501471	(165794088)	C	L2c	LINE/L2	(252)	3123	2935	2543987
2062	11.7	1.3	1.0	chr3	33114944	33115243	(165180316)	C	AluJb	SINE/Alu	(10)	302	2	2545327
10489	20.9	6.7	6.5	chr3	36362755	36365280	(161930279)	+	MER4B-int	LTR/ERV1	1851	4551	(2207)	2549794
208	29.2	5.3	0.0	chr3	39152296	39152367	(159143192)	C	L2b	LINE/L2	(541)	2878	2803	2554040
16	22.9	0.0	7.6	chr3	39152889	39152954	(159142605)	+	(TCCC)n	Simple_repeat	1	66	(0)	2554042
484	33.0	9.3	3.4	chr3	39181187	39181516	(159114043)	+	L2a	LINE/L2	3068	3422	(4)	2554103
1259	12.6	0.6	0.0	chr3	42036749	42036922	(156258637)	C	AluJr4	SINE/Alu	(10)	302	128	2558430
521	27.9	2.4	5.5	chr3	43622605	43622858	(154672701)	+	L2a	LINE/L2	2996	3241	(185)	2560883
322	26.5	10.0	6.7	chr3	43649592	43649759	(154645800)	C	MIR	SINE/MIR	(24)	184	7	2560943
427	23.5	9.7	0.0	chr3	45139327	45139428	(153156131)	C	MIRb	SINE/MIR	(151)	117	2	2563304
281	24.3	3.6	2.7	chr3	45167630	45167739	(153127820)	C	LTR33	LTR/ERVL	(0)	515	405	2563358
537	26.7	15.4	2.7	chr3	45179231	45179596	(153115963)	C	LTR16A2	LTR/ERVL	(48)	447	27	2563381
742	15.2	2.2	0.0	chr3	45597164	45597295	(152698264)	+	MER5A	DNA/hAT-Charlie	1	135	(54)	2564116
2102	13.1	1.7	0.0	chr3	46661523	46661813	(151633746)	+	AluSz	SINE/Alu	1	296	(16)	2565762
14	8.9	0.0	0.0	chr3	46882670	46882693	(151412866)	+	(GGGA)n	Simple_repeat	1	24	(0)	2566056
11	27.4	2.0	2.0	chr3	48088856	48088905	(150206654)	+	(GGAGCCG)n	Simple_repeat	1	51	(0)	2568628
15	18.9	4.8	0.0	chr3	48429479	48429520	(149866039)	+	(CCCG)n	Simple_repeat	1	44	(0)	2569300
251	25.8	21.5	0.8	chr3	48430134	48430258	(149865301)	+	MIRb	SINE/MIR	22	179	(89)	2569301
492	30.6	12.8	3.0	chr3	48738229	48738663	(149556896)	C	L2	LINE/L2	(978)	2441	1958	2569812
11	28.5	4.9	3.5	chr3	49340061	49340142	(148955417)	+	(CGCGCCG)n	Simple_repeat	1	86	(0)	2571124
13	28.0	0.0	0.0	chr3	49940171	49940213	(148355346)	+	(CGGAGG)n	Simple_repeat	1	43	(0)	2572263
16	10.0	0.0	5.6	chr3	50205204	50205239	(148090320)	+	(GGCGG)n	Simple_repeat	1	36	(0)	2572765
204	27.8	6.2	0.0	chr3	50422353	50422442	(147873117)	+	L2c	LINE/L2	3045	3140	(247)	2573018
13	12.1	5.0	4.8	chr3	50539386	50539425	(147756134)	+	GA-rich	Low_complexity	1	42	(0)	2573172
11367	17.1	1.9	1.9	chr3	50979179	50979311	(147316248)	C	L1M2	LINE/L1	(1637)	5925	5797	2573801
1855	18.2	5.9	3.1	chr3	50979312	50979725	(147315834)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2573804
15	21.0	7.2	2.7	chr3	52128284	52128352	(146167207)	+	(CAG)n	Simple_repeat	1	74	(0)	2575461
15	23.3	3.5	6.7	chr3	52278686	52278771	(146016788)	+	G-rich	Low_complexity	1	89	(0)	2575687
268	33.6	10.7	3.8	chr3	52704709	52704996	(145590563)	+	L2b	LINE/L2	3066	3375	(0)	2576321
240	30.2	11.1	2.0	chr3	53069710	53069905	(145225654)	+	L1ME3G	LINE/L1	355	570	(354)	2576946
11	21.3	2.5	2.4	chr3	53236287	53236326	(145059233)	+	(GCAGAG)n	Simple_repeat	1	41	(0)	2577257
18	14.9	0.0	0.0	chr3	55516244	55516280	(142779279)	+	(A)n	Simple_repeat	1	37	(0)	2580570
487	28.2	15.9	4.6	chr3	58215034	58215522	(140080037)	+	L2c	LINE/L2	2830	3380	(7)	2585577
18	26.3	0.0	0.0	chr3	61563128	61563178	(136732381)	+	G-rich	Low_complexity	1	51	(0)	2590830
186	30.6	2.7	2.7	chr3	61822016	61822089	(136473470)	C	MIR	SINE/MIR	(129)	133	60	2591293
14	14.6	0.0	3.1	chr3	63912111	63912142	(134383417)	+	(CGGA)n	Simple_repeat	1	32	(0)	2594888
459	31.7	6.1	6.1	chr3	63947599	63947703	(134347856)	C	MIR	SINE/MIR	(141)	121	8	2594947
1362	28.1	10.7	3.1	chr3	63947724	63948506	(134347053)	C	L2b	LINE/L2	(201)	3174	2321	2594949
3402	16.4	3.9	1.2	chr3	63976703	63977306	(134318253)	C	Tigger9b	DNA/TcMar-Tigger	(0)	624	4	2594983
283	31.9	1.6	3.7	chr3	64104171	64104359	(134191200)	C	MER126	DNA	(162)	287	103	2595156
23	21.1	2.6	3.9	chr3	64445522	64445597	(133849962)	+	(CCCT)n	Simple_repeat	1	78	(0)	2595748
22	22.9	8.4	2.6	chr3	64688372	64688478	(133607081)	+	(CT)n	Simple_repeat	1	116	(0)	2596147
344	26.7	12.3	0.7	chr3	65875764	65875899	(132419660)	C	MIRb	SINE/MIR	(0)	268	115	2598186
256	30.3	0.0	0.0	chr3	65875900	65875975	(132419584)	+	HAL1	LINE/L1	1828	1903	(604)	2598187
26	23.6	2.7	0.0	chr3	69080384	69080458	(129215101)	+	G-rich	Low_complexity	1	77	(0)	2603415
261	30.8	3.2	3.2	chr3	69237031	69237154	(129058405)	C	MIR3	SINE/MIR	(46)	162	39	2603744
303	18.5	1.5	4.4	chr3	71051237	71051304	(127244255)	+	MER131	DNA?	1	66	(149)	2606639
1304	26.2	2.7	3.8	chr3	72905438	72905886	(125389673)	C	L1ME3C	LINE/L1	(278)	5845	5402	2610171
2288	10.9	0.0	1.0	chr3	73236693	73237004	(125058555)	+	AluSc	SINE/Alu	1	309	(0)	2610876
18	27.6	1.2	4.7	chr3	77039727	77039811	(121255748)	+	(CCCCT)n	Simple_repeat	1	86	(0)	2616366
752	25.6	5.2	4.2	chr3	77197669	77197953	(121097606)	+	MLT1D	LTR/ERVL-MaLR	3	290	(215)	2616559
627	31.2	4.9	2.2	chr3	80285529	80285885	(118009674)	C	L1ME1	LINE/L1	(6003)	397	31	2620568
886	15.1	1.4	1.4	chr3	94062637	94062782	(104232777)	C	AluJr	SINE/Alu	(15)	297	152	2633773
447	22.7	3.5	0.9	chr3	94063363	94063473	(104232086)	+	L2a	LINE/L2	3313	3426	(0)	2633774
220	30.2	8.5	4.4	chr3	98523167	98523301	(99772258)	C	MIR3	SINE/MIR	(65)	143	3	2639031
16	0.0	0.0	0.0	chr3	100993561	100993578	(97301981)	+	(A)n	Simple_repeat	1	18	(0)	2642427
29	0.0	0.0	0.0	chr3	101513214	101513245	(96782314)	+	(A)n	Simple_repeat	1	32	(0)	2643091
2246	22.8	11.7	1.2	chr3	102600204	102600691	(95694868)	+	LTR1D	LTR/ERV1	321	866	(109)	2644754
12	12.6	0.0	3.6	chr3	105366332	105366359	(92929200)	+	(TCCTT)n	Simple_repeat	1	28	(0)	2648179
11	18.1	2.4	4.8	chr3	105366741	105366781	(92928778)	+	G-rich	Low_complexity	1	42	(0)	2648180
349	24.4	15.6	4.8	chr3	107429709	107429936	(90865623)	C	Charlie23a	DNA/hAT-Charlie	(75)	264	8	2650829
16	14.7	0.0	0.0	chr3	111072131	111072160	(87223399)	+	(GCT)n	Simple_repeat	1	30	(0)	2656046
2529	19.6	5.1	6.6	chr3	112302479	112303209	(85992350)	+	HERV3-int	LTR/ERV1	1	720	(8081)	2657626
16	23.3	1.9	1.9	chr3	115146880	115146931	(83148628)	+	(TCCC)n	Simple_repeat	1	53	(0)	2661717
13	26.9	1.8	3.5	chr3	115147777	115147833	(83147726)	+	(CTC)n	Simple_repeat	1	58	(0)	2661720
13	14.1	3.0	2.9	chr3	119294093	119294130	(79001429)	+	(CGG)n	Simple_repeat	1	38	(0)	2667323
17	5.4	4.3	8.3	chr3	119322570	119322615	(78972944)	+	(CTCCCAC)n	Simple_repeat	1	48	(0)	2667374
199	26.4	9.0	8.1	chr3	119468658	119468756	(78826803)	+	MIRc	SINE/MIR	34	133	(135)	2667627
622	24.5	9.2	2.5	chr3	120595854	120596055	(77699504)	C	MIRc	SINE/MIR	(39)	229	12	2669375
2206	14.0	9.3	1.8	chr3	122572926	122573324	(75722235)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2672239
462	20.0	15.1	1.5	chr3	122975513	122975649	(75319910)	+	MIRb	SINE/MIR	107	265	(3)	2672904
528	29.4	4.2	0.0	chr3	123071172	123071331	(75224228)	C	MIR3	SINE/MIR	(39)	169	3	2673100
1797	15.2	8.8	1.0	chr3	123586151	123586462	(74709097)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	2673961
13	19.6	0.0	0.0	chr3	125594658	125594687	(72700872)	+	(CTG)n	Simple_repeat	1	30	(0)	2677362
468	25.0	12.3	1.8	chr3	127591295	127591461	(70704098)	C	MIRb	SINE/MIR	(81)	187	1	2680326
207	37.4	4.2	0.9	chr3	127591485	127591600	(70703959)	+	L2b	LINE/L2	2939	3058	(317)	2680327
1052	30.8	15.7	0.3	chr3	128471819	128472405	(69823154)	+	L1ME3Cz	LINE/L1	173	866	(131)	2681780
14	10.0	2.8	5.4	chr3	128473264	128473299	(69822260)	+	(GGCAGG)n	Simple_repeat	1	37	(0)	2681783
304	29.9	16.9	1.1	chr3	128618271	128618449	(69677110)	C	MIR	SINE/MIR	(29)	233	21	2682054
583	27.9	14.9	2.0	chr3	128794804	128795048	(69500511)	C	L2a	LINE/L2	(52)	3374	3093	2682484
1393	26.6	10.3	3.3	chr3	129626157	129626685	(68668874)	+	L1ME1	LINE/L1	5607	6178	(1)	2684106
14	15.0	2.4	4.8	chr3	130517100	130517140	(67778419)	+	G-rich	Low_complexity	1	42	(0)	2685612
2478	5.4	0.3	1.3	chr3	130727225	130727522	(67568037)	C	AluYk4	SINE/Alu	(16)	295	1	2685888
439	32.4	6.3	3.7	chr3	131331110	131331404	(66964155)	C	Tigger18a	DNA/TcMar-Tigger	(549)	303	1	2686746
27419	3.7	0.2	0.2	chr3	131331471	131337625	(66957934)	+	L1PA3	LINE/L1	2	6152	(3)	2686749
21086	9.4	2.6	0.4	chr3	132849593	132855566	(65439993)	C	L1PB1	LINE/L1	(0)	6867	620	2689042
11	29.1	3.7	0.0	chr3	134364168	134364221	(63931338)	+	G-rich	Low_complexity	1	56	(0)	2691340
17	21.5	0.0	3.9	chr3	134374582	134374633	(63920926)	+	(CCTCCGC)n	Simple_repeat	1	52	(0)	2691350
402	31.3	6.1	7.3	chr3	138082423	138082670	(60212889)	+	MLT1O	LTR/ERVL-MaLR	274	518	(24)	2696921
261	20.9	5.6	8.2	chr3	138082766	138082838	(60212721)	+	MLT1J	LTR/ERVL-MaLR	110	180	(332)	2696922
298	33.0	4.2	0.0	chr3	138186353	138186467	(60109092)	C	L2c	LINE/L2	(641)	2778	2659	2697133
182	25.8	9.6	1.5	chr3	138915350	138915416	(59380143)	C	L2a	LINE/L2	(47)	3379	3307	2698510
541	21.4	10.3	0.7	chr3	140911059	140911199	(57384360)	C	LTR33A	LTR/ERVL	(306)	197	42	2701498
240	25.7	9.1	0.0	chr3	140931043	140931112	(57364447)	+	L1M6	LINE/L1	403	479	(6017)	2701530
26	13.8	4.3	4.2	chr3	142963601	142963669	(55331890)	+	(CGG)n	Simple_repeat	1	72	(0)	2704981
13	9.8	0.0	0.0	chr3	142963695	142963716	(55331843)	+	(GCC)n	Simple_repeat	1	22	(0)	2704982
198	33.3	5.3	0.0	chr3	143000695	143000766	(55294793)	+	L2b	LINE/L2	3019	3094	(281)	2705056
350	21.0	1.0	6.5	chr3	143000813	143000919	(55294640)	C	MamTip1	DNA/hAT-Tip100	(1)	266	166	2705057
12	6.9	5.9	5.6	chr3	146544852	146544885	(51750674)	+	(GGAACT)n	Simple_repeat	1	36	(0)	2709708
12	19.4	4.7	2.2	chr3	152268641	152268683	(46026876)	+	(CGGCTC)n	Simple_repeat	1	45	(0)	2717973
2571	23.9	7.8	7.3	chr3	155356672	155357465	(42938094)	C	LTR1D	LTR/ERV1	(0)	974	54	2722375
255	36.3	5.8	0.0	chr3	156819004	156819149	(41476410)	C	MLT1L	LTR/ERVL-MaLR	(335)	275	121	2724607
13	5.3	0.0	0.0	chr3	156826640	156826659	(41468900)	+	(CCT)n	Simple_repeat	1	20	(0)	2724616
18	26.9	2.3	4.5	chr3	157159577	157159663	(41135896)	+	(CCG)n	Simple_repeat	1	89	(0)	2725059
12	29.2	2.0	0.0	chr3	159764342	159764391	(38531168)	+	G-rich	Low_complexity	1	51	(0)	2728700
16	4.5	0.0	0.0	chr3	159764483	159764505	(38531054)	+	(GCA)n	Simple_repeat	1	23	(0)	2728701
12	13.8	4.4	6.4	chr3	159765903	159765947	(38529612)	+	G-rich	Low_complexity	1	47	(0)	2728703
295	28.6	19.0	1.1	chr3	160561889	160562065	(37733494)	C	MIRb	SINE/MIR	(34)	228	13	2729994
836	18.2	4.0	1.1	chr3	160562123	160562335	(37733224)	+	MER33	DNA/hAT-Charlie	2	214	(110)	2729995
14	22.4	0.0	5.8	chr3	173395247	173395298	(24900261)	+	(CAGAGG)n	Simple_repeat	1	52	(0)	2747506
13	12.6	0.0	9.5	chr3	173585477	173585518	(24710041)	+	(TCCCCT)n	Simple_repeat	1	42	(0)	2747757
389	35.0	7.1	6.8	chr3	175338897	175339221	(22956338)	+	MamRTE1	LINE/RTE-BovB	3359	3684	(128)	2750228
188	29.7	1.5	3.0	chr3	179068099	179068164	(19227395)	C	L3b	LINE/CR1	(2)	5230	5166	2755558
865	18.2	26.1	5.7	chr3	183115869	183116225	(15179334)	C	MER51E	LTR/ERV1	(25)	615	42	2762118
31	0.0	0.0	0.0	chr3	184174586	184174619	(14120940)	+	(A)n	Simple_repeat	1	34	(0)	2764151
23	20.8	0.0	1.8	chr3	184565823	184565879	(13729680)	+	(GCAGCT)n	Simple_repeat	1	57	(0)	2764915
20	28.1	0.0	1.5	chr3	184565880	184565888	(13729671)	+	(GCT)n	Simple_repeat	1	66	(0)	2764916
12	14.9	6.0	5.7	chr3	184569120	184569169	(13726390)	+	G-rich	Low_complexity	1	53	(0)	2764921
20	21.6	0.0	3.5	chr3	184569184	184569240	(13726319)	+	(GGCG)n	Simple_repeat	1	57	(0)	2764922
12	15.4	5.3	2.5	chr3	184795480	184795517	(13500042)	+	G-rich	Low_complexity	1	40	(0)	2765340
17	22.6	0.0	8.2	chr3	184795612	184795684	(13499875)	+	(CCTC)n	Simple_repeat	1	73	(0)	2765341
373	28.1	5.8	4.1	chr3	185760789	185761007	(12534552)	+	L4_A_Mam	LINE/RTE-X	4740	4962	(28)	2767035
283	34.6	1.9	0.0	chr3	187066943	187067046	(11228513)	C	MIR3	SINE/MIR	(73)	135	30	2769539
1515	31.5	1.6	4.2	chr3	187101518	187102170	(11193389)	C	L1MA7	LINE/L1	(4693)	1872	1216	2769578
36	23.5	0.0	0.0	chr3	187745323	187745401	(10550158)	+	(AGC)n	Simple_repeat	1	79	(0)	2770635
37	7.2	0.0	0.0	chr3	187750619	187750663	(10544896)	+	(AC)n	Simple_repeat	1	45	(0)	2770639
229	28.0	9.3	1.8	chr3	187750668	187750776	(10544783)	+	MIR3	SINE/MIR	48	165	(43)	2770640
2041	26.6	6.0	0.2	chr3	190972706	190973221	(7322338)	+	MLT1F1	LTR/ERVL-MaLR	1	548	(21)	2775906
184	36.5	0.0	0.0	chr3	194070556	194070629	(4224930)	+	MIR3	SINE/MIR	50	123	(85)	2780481
406	21.1	8.4	5.6	chr3	194140531	194140699	(4154860)	+	MIR3	SINE/MIR	18	185	(23)	2780608
26	13.3	2.6	7.6	chr3	194141526	194141602	(4153957)	+	(GGC)n	Simple_repeat	1	79	(0)	2780609
2396	6.0	0.0	0.0	chr3	194349779	194350101	(3945458)	C	AluSq	SINE/Alu	(0)	313	1	2780981
277	35.2	3.5	3.2	chr3	194350102	194350308	(3945251)	+	L2b	LINE/L2	3168	3374	(1)	2780980
12	15.7	2.6	5.0	chr3	195442412	195442450	(2853109)	+	GA-rich	Low_complexity	1	40	(0)	2782938
17	9.7	0.0	5.4	chr3	196740031	196740067	(1555492)	+	(TCCCC)n	Simple_repeat	1	37	(0)	2785666
17	22.6	2.7	5.3	chr3	197003012	197003085	(1292474)	+	G-rich	Low_complexity	1	76	(0)	2786205
15	25.2	0.0	3.6	chr3	197298664	197298718	(996841)	+	G-rich	Low_complexity	1	55	(0)	2786666
26	6.3	0.0	0.0	chr3	197298935	197298968	(996591)	+	(TTCA)n	Simple_repeat	1	34	(0)	2786667
273	24.3	15.0	1.5	chr3	197299251	197299363	(996196)	C	MIR3	SINE/MIR	(140)	128	4	2786668
634	25.3	21.2	0.6	chr4	782342	782655	(189431900)	+	L2a	LINE/L2	3017	3412	(14)	2789517
863	29.9	13.2	1.4	chr4	815691	816213	(189398342)	C	LTR106_Mam	LTR	(38)	670	84	2789572
181	32.5	14.0	3.9	chr4	1881813	1881991	(188332564)	C	L2b	LINE/L2	(219)	3156	2957	2790750
906	21.3	5.2	4.8	chr4	2330031	2330281	(187884274)	+	L1MB8	LINE/L1	5914	6165	(13)	2791423
1713	21.6	12.5	11.7	chr4	2363239	2363809	(187850746)	+	MER70B	LTR/ERVL	1	576	(2)	2791465
12059	9.0	0.8	0.6	chr4	2477812	2479389	(187735166)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2791626
230	24.2	0.0	1.6	chr4	3300037	3300099	(186914456)	+	MIRb	SINE/MIR	172	233	(35)	2793037
936	21.6	27.5	0.0	chr4	3655688	3655979	(186558576)	C	MER57B2	LTR/ERV1	(0)	403	1	2793436
1511	19.7	16.4	1.4	chr4	3810774	3811139	(186403416)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2793650
203	33.8	0.0	0.0	chr4	4541463	4541533	(185673022)	C	L3	LINE/CR1	(111)	3988	3918	2794907
14	35.9	0.0	0.0	chr4	4859983	4860049	(185354506)	+	(CGCGGC)n	Simple_repeat	1	67	(0)	2795609
15	21.5	6.1	0.0	chr4	5888483	5888531	(184326024)	+	GA-rich	Low_complexity	1	52	(0)	2797363
439	30.4	6.4	2.0	chr4	6469205	6469399	(183745156)	C	L2b	LINE/L2	(220)	3155	2952	2798430
243	25.9	0.0	0.0	chr4	6927195	6927248	(183287307)	C	L2c	LINE/L2	(70)	3317	3264	2799327
258	27.4	8.6	3.6	chr4	6927306	6927415	(183287140)	+	MIR	SINE/MIR	7	122	(140)	2799328
523	24.3	4.0	4.0	chr4	7073491	7073666	(183140889)	C	MLT1J	LTR/ERVL-MaLR	(32)	480	305	2799549
590	19.2	8.5	1.9	chr4	7073736	7073889	(183140666)	C	MLT1J	LTR/ERVL-MaLR	(335)	177	13	2799549
214	27.5	13.8	0.0	chr4	8267495	8267570	(181946985)	+	MIRb	SINE/MIR	105	189	(41)	2801506
198	35.2	4.1	8.8	chr4	8777391	8777720	(181436835)	C	L2b	LINE/L2	(7)	3368	3055	2802291
17	16.4	0.0	0.0	chr4	13544914	13544947	(176669608)	+	(CGG)n	Simple_repeat	1	34	(0)	2809469
22	19.5	0.0	0.0	chr4	15003113	15003159	(175211396)	+	(CCT)n	Simple_repeat	1	47	(0)	2811955
14	8.1	3.9	0.0	chr4	15003176	15003201	(175211354)	+	(AGC)n	Simple_repeat	1	27	(0)	2811956
186	35.1	5.6	7.2	chr4	19694168	19694569	(170519986)	C	OldhAT1	DNA/hAT-Ac	(1013)	1835	1441	2819896
351	33.6	13.3	0.0	chr4	22500246	22500467	(167714088)	+	MIR	SINE/MIR	19	262	(0)	2824057
883	25.6	6.7	4.5	chr4	24477876	24478346	(165736209)	+	MLT1K	LTR/ERVL-MaLR	4	551	(44)	2827193
201	21.7	15.3	0.0	chr4	25233627	25233709	(164980846)	C	L2b	LINE/L2	(76)	3299	3202	2828549
17	4.0	3.9	0.0	chr4	25233912	25233937	(164980618)	+	(GCC)n	Simple_repeat	1	27	(0)	2828550
42	0.0	0.0	0.0	chr4	30716894	30716931	(159497624)	+	(AGC)n	Simple_repeat	1	38	(0)	2837087
14	17.6	0.0	0.0	chr4	30721391	30721422	(159493133)	+	(AGCAGC)n	Simple_repeat	1	32	(0)	2837093
776	29.8	2.0	9.1	chr4	38160634	38160984	(152053571)	+	MLT1I	LTR/ERVL-MaLR	102	410	(1)	2847301
448	32.6	6.1	9.0	chr4	38160986	38161342	(152053213)	+	L2c	LINE/L2	3041	3386	(1)	2847298
2141	17.0	2.7	1.4	chr4	38816328	38816690	(151397865)	C	MSTA	LTR/ERVL-MaLR	(0)	428	61	2848463
769	22.1	1.9	0.0	chr4	39514984	39515137	(150699418)	C	AluJb	SINE/Alu	(19)	293	137	2849790
1754	12.4	8.9	4.7	chr4	39820254	39820573	(150393982)	C	THE1D	LTR/ERVL-MaLR	(33)	348	2	2850556
16	16.5	0.0	0.0	chr4	47485687	47485713	(142728842)	+	A-rich	Low_complexity	1	27	(0)	2862327
3083	27.6	9.3	4.0	chr4	55376536	55377787	(134836768)	+	L2a	LINE/L2	1805	3137	(289)	2870782
762	15.0	1.3	0.7	chr4	56392900	56393047	(133821508)	C	L1MC1	LINE/L1	(430)	5903	5755	2872533
24	31.0	0.0	0.0	chr4	56977242	56977320	(133237235)	+	(TGC)n	Simple_repeat	1	79	(0)	2873750
13	18.2	0.0	4.9	chr4	65670313	65670353	(124544202)	+	(GCTGAGG)n	Simple_repeat	1	41	(0)	2884662
12	17.7	3.1	0.0	chr4	70902282	70902313	(119312242)	+	(CCTCC)n	Simple_repeat	1	33	(0)	2891446
12	20.4	5.6	3.5	chr4	70902418	70902471	(119312084)	+	(CTCCTGT)n	Simple_repeat	1	57	(0)	2891447
458	34.2	8.7	0.8	chr4	71446483	71446727	(118767828)	+	MIRc	SINE/MIR	3	268	(0)	2892224
14	10.4	3.0	2.9	chr4	78057372	78057404	(112157151)	+	(GCGGT)n	Simple_repeat	1	34	(0)	2901638
16	13.2	0.0	0.0	chr4	80196731	80196755	(110017800)	+	(A)n	Simple_repeat	1	25	(0)	2904517
12	17.3	8.9	3.3	chr4	81030514	81030569	(109183986)	+	(TCCTCT)n	Simple_repeat	1	61	(0)	2905573
13	15.0	8.7	2.0	chr4	84499210	84499255	(105715300)	+	(CCTCT)n	Simple_repeat	1	50	(0)	2911183
18	26.4	0.0	7.9	chr4	84966704	84966736	(105247819)	+	(TCC)n	Simple_repeat	44	89	(0)	2911910
19	13.0	2.2	4.3	chr4	84966775	84966782	(105247773)	+	(CCTT)n	Simple_repeat	1	46	(0)	2911912
13	12.6	5.4	2.6	chr4	84966783	84966819	(105247736)	+	(CCTTT)n	Simple_repeat	1	39	(0)	2911913
15	23.7	9.2	2.5	chr4	88007541	88007649	(102206906)	+	(GGCGGACG)n	Simple_repeat	1	119	(0)	2916370
472	33.3	12.3	3.9	chr4	88285089	88285819	(101928736)	C	L2a	LINE/L2	(0)	3426	2612	2916879
22263	9.9	4.9	1.8	chr4	88880093	88886306	(101328249)	+	L1PB1	LINE/L1	35	6498	(369)	2917806
19	4.0	3.9	0.0	chr4	90127564	90127589	(100086966)	+	(CT)n	Simple_repeat	1	27	(0)	2919578
1493	24.8	6.0	6.2	chr4	91064258	91064808	(99149747)	C	MER68B	LTR/ERVL	(2)	562	13	2920753
1627	21.4	6.9	3.9	chr4	94850192	94850683	(95363872)	C	Charlie4a	DNA/hAT-Charlie	(0)	508	1	2925649
15	26.6	0.0	0.0	chr4	102345350	102345394	(87869161)	+	(CTGT)n	Simple_repeat	1	45	(0)	2935547
11828	12.7	4.7	3.7	chr4	102736695	102737473	(87477082)	+	L1PB1	LINE/L1	3	772	(6091)	2936075
407	30.3	9.3	2.9	chr4	102759733	102759902	(87454653)	+	MIRb	SINE/MIR	27	208	(60)	2936100
34	4.0	7.7	0.0	chr4	104494918	104494969	(85719586)	+	(TC)n	Simple_repeat	1	56	(0)	2938272
13	13.0	0.0	7.7	chr4	104495055	104495093	(85719462)	+	G-rich	Low_complexity	1	39	(0)	2938273
24	15.3	2.3	0.0	chr4	104495371	104495414	(85719141)	+	(TG)n	Simple_repeat	1	45	(0)	2938274
12	22.0	4.8	0.0	chr4	108167889	108167930	(82046625)	+	(GCGG)n	Simple_repeat	1	44	(0)	2943036
15	12.2	0.0	0.0	chr4	109302706	109302732	(80911823)	+	(GTGA)n	Simple_repeat	1	27	(0)	2944734
13	25.1	6.6	0.0	chr4	109302732	109302792	(80911763)	+	(GCGCCCG)n	Simple_repeat	1	65	(0)	2944735
11	30.4	0.0	0.0	chr4	110196409	110196452	(80018103)	+	(CCGGCC)n	Simple_repeat	1	44	(0)	2946147
430	29.1	4.6	0.4	chr4	110412311	110412541	(79802014)	C	L1MEh	LINE/L1	(1235)	1000	760	2946569
27	19.9	3.5	3.4	chr4	110636976	110637061	(79577494)	+	(TCTC)n	Simple_repeat	1	89	(0)	2946880
39	6.7	0.0	0.0	chr4	110851273	110851319	(79363236)	+	(TG)n	Simple_repeat	1	47	(0)	2947161
247	31.2	7.1	2.7	chr4	112233607	112233754	(77980801)	C	Tigger19a	DNA/TcMar-Tigger	(32)	291	137	2948896
2559	5.3	0.0	1.0	chr4	112233858	112234158	(77980397)	C	AluY	SINE/Alu	(13)	298	1	2948897
14	13.9	3.1	0.0	chr4	112514924	112514955	(77699600)	+	(CGCCCC)n	Simple_repeat	1	33	(0)	2949283
27	5.6	2.6	0.0	chr4	113116687	113116724	(77097831)	+	(CAG)n	Simple_repeat	1	39	(0)	2950416
351	20.6	12.1	12.8	chr4	113761739	113761855	(76452700)	+	L1MDb	LINE/L1	597	712	(5697)	2951248
17	12.1	5.6	0.0	chr4	115113815	115113850	(75100705)	+	(GCT)n	Simple_repeat	1	38	(0)	2952865
14	13.1	11.5	1.7	chr4	121823742	121823793	(68390762)	+	(CAGCC)n	Simple_repeat	1	58	(0)	2961635
2596	17.2	1.3	1.3	chr4	122700198	122700669	(67513886)	+	MER70A	LTR/ERVL	1	472	(0)	2962867
4252	17.1	5.9	3.2	chr4	122775712	122776580	(67437975)	C	MER54A	LTR/ERVL	(7)	894	1	2963003
19250	4.6	0.1	0.1	chr4	123000001	123004460	(67210095)	C	L1P1	LINE/L1	(1690)	4456	2	2963332
3401	20.3	7.3	0.8	chr4	123004464	123005146	(67209409)	C	L1MEc	LINE/L1	(2214)	4105	3366	2963333
34	5.6	0.0	0.0	chr4	125315055	125315092	(64899463)	+	(TG)n	Simple_repeat	1	38	(0)	2966465
13	21.9	3.5	5.0	chr4	128393637	128393694	(61820861)	+	GA-rich	Low_complexity	1	60	(0)	2970684
18	9.6	0.0	5.4	chr4	128812298	128812334	(61402221)	+	GA-rich	Low_complexity	1	37	(0)	2971409
13	16.4	0.0	5.3	chr4	139556334	139556371	(50658184)	+	(CCCTCGC)n	Simple_repeat	1	38	(0)	2984845
12	7.9	7.4	0.0	chr4	140151677	140151703	(50062852)	+	G-rich	Low_complexity	1	29	(0)	2985798
12	23.4	0.0	4.5	chr4	140151741	140151784	(50062771)	+	A-rich	Low_complexity	1	44	(0)	2985799
15	22.4	0.0	5.8	chr4	140153131	140153182	(50061373)	+	(GCC)n	Simple_repeat	1	52	(0)	2985802
345	27.8	10.1	3.2	chr4	140743352	140743507	(49471048)	C	MIRb	SINE/MIR	(54)	214	47	2986688
21	16.2	2.0	2.0	chr4	143336127	143336176	(46878379)	+	(CTCC)n	Simple_repeat	1	51	(0)	2990175
12	32.3	0.0	1.8	chr4	143336252	143336307	(46878248)	+	G-rich	Low_complexity	1	56	(0)	2990176
12	13.5	2.8	5.4	chr4	143336362	143336397	(46878158)	+	G-rich	Low_complexity	1	37	(0)	2990176
14	9.1	0.0	0.0	chr4	143336711	143336734	(46877821)	+	(GGGC)n	Simple_repeat	1	24	(0)	2990177
37	0.0	0.0	0.0	chr4	143336749	143336780	(46877775)	+	(TG)n	Simple_repeat	1	32	(0)	2990178
222	30.2	10.7	3.0	chr4	147735482	147735645	(42478910)	C	L2	LINE/L2	(421)	2998	2821	2996131
17	21.0	2.0	1.9	chr4	148444881	148444931	(41769624)	+	(CCCGCGC)n	Simple_repeat	1	52	(0)	2997128
2348	11.7	8.4	0.2	chr4	153362224	153362616	(36851939)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3004507
270	32.4	3.5	1.4	chr4	153522584	153522724	(36691831)	+	L2a	LINE/L2	3283	3426	(0)	3004830
2233	20.0	1.4	0.2	chr4	155679299	155679725	(34534830)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	3007778
642	27.5	6.3	1.2	chr4	158996518	158996771	(31217784)	C	MLT1L	LTR/ERVL-MaLR	(22)	588	321	3012195
427	32.0	0.7	0.7	chr4	158996790	158996937	(31217618)	C	MLT1L	LTR/ERVL-MaLR	(331)	279	132	3012195
22	22.7	0.0	0.0	chr4	169010176	169010221	(21204334)	+	A-rich	Low_complexity	1	46	(0)	3025634
454	32.1	0.0	2.1	chr4	169185141	169185280	(21029275)	C	L2b	LINE/L2	(1)	3374	3238	3025949
219	33.8	2.7	0.0	chr4	170089444	170089514	(20125041)	+	L2b	LINE/L2	3290	3362	(25)	3027352
350	36.8	4.9	3.4	chr4	172998488	172998808	(17215747)	+	L2	LINE/L2	1864	2189	(1230)	3030997
15	20.5	3.5	8.0	chr4	173168705	173168789	(17045766)	+	G-rich	Low_complexity	1	88	(0)	3031238
25731	4.0	0.6	0.1	chr4	173603063	173609186	(16605369)	C	L1PA4	LINE/L1	(1)	6154	7	3031857
290	28.1	5.0	2.6	chr4	182308124	182308240	(7906315)	C	MER91A	DNA/hAT-Tip100	(25)	171	52	3043243
14	3.6	6.7	3.1	chr4	183504426	183504455	(6710100)	+	(CGGAG)n	Simple_repeat	1	32	(0)	3045072
13	6.2	7.9	4.9	chr4	183797083	183797120	(6417435)	+	(GAGGTGG)n	Simple_repeat	1	41	(0)	3045633
12	15.6	3.5	0.0	chr4	183799150	183799178	(6415377)	+	(TTTTG)n	Simple_repeat	1	30	(0)	3045637
649	28.1	7.6	0.4	chr4	184343855	184344086	(5870469)	C	LTR33A	LTR/ERVL	(267)	264	15	3046410
31	17.6	2.5	2.4	chr4	184474579	184474658	(5739897)	+	(CCCTCCG)n	Simple_repeat	1	82	(0)	3046627
497	28.3	13.7	8.9	chr4	184537191	184537727	(5676828)	+	L1M6	LINE/L1	43	613	(5883)	3046748
227	30.6	4.4	9.4	chr4	185925841	185926031	(4288524)	C	L2c	LINE/L2	(176)	3211	3031	3048932
365	32.5	14.5	4.1	chr4	185926048	185926538	(4288017)	C	L2c	LINE/L2	(436)	2983	2433	3048932
21	24.4	2.9	1.4	chr5	5140251	5140319	(176397940)	+	(CCG)n	Simple_repeat	1	71	(0)	3060216
31	14.0	0.0	0.0	chr5	5422615	5422669	(176115590)	+	(GGGGC)n	Simple_repeat	1	55	(0)	3060547
332	29.6	1.1	0.0	chr5	6724894	6724981	(174813278)	C	MIR	SINE/MIR	(161)	101	13	3062235
510	25.3	3.1	3.6	chr5	10249377	10249590	(171288669)	C	MIR	SINE/MIR	(32)	236	18	3066553
17	20.7	3.5	10.0	chr5	10306359	10306474	(171231785)	+	GA-rich	Low_complexity	1	120	(0)	3066657
40	25.7	2.9	7.5	chr5	10307850	10308095	(171230164)	+	G-rich	Low_complexity	1	253	(0)	3066658
2079	11.8	10.8	3.0	chr5	10320734	10321085	(171217174)	C	MSTA	LTR/ERVL-MaLR	(33)	395	1	3066692
265	30.1	7.3	1.3	chr5	10353088	10353242	(171185017)	C	MamTip3	DNA/hAT-Tip100	(312)	188	24	3066755
2076	16.1	0.3	0.0	chr5	10584265	10584569	(170953690)	+	AluJb	SINE/Alu	2	307	(5)	3067181
13	7.2	2.9	8.3	chr5	10595175	10595209	(170943050)	+	GA-rich	Low_complexity	1	36	(0)	3067203
616	23.6	14.0	4.3	chr5	10595258	10595605	(170942654)	C	MLT1C	LTR/ERVL-MaLR	(8)	459	1	3067204
842	26.7	9.3	6.3	chr5	12895948	12896394	(168641865)	+	MLT1C	LTR/ERVL-MaLR	6	467	(0)	3070149
245	16.7	4.5	0.0	chr5	14036582	14036623	(167501636)	C	MER91A	DNA/hAT-Tip100	(11)	185	142	3071659
216	28.6	4.5	0.0	chr5	14138929	14138991	(167399268)	C	L2c	LINE/L2	(221)	3166	3101	3071852
181	31.7	11.1	3.2	chr5	14154524	14154647	(167383612)	C	MamRTE1	LINE/RTE-BovB	(3530)	282	148	3071871
5901	21.1	6.9	4.4	chr5	14155184	14156718	(167381541)	C	L1MC4	LINE/L1	(76)	7966	6390	3071872
15	5.6	0.0	0.0	chr5	14265081	14265099	(167273160)	+	(T)n	Simple_repeat	1	19	(0)	3072008
2227	10.8	0.7	0.0	chr5	16909227	16909523	(164628736)	+	AluSx3	SINE/Alu	1	299	(12)	3075755
2477	11.3	0.3	5.0	chr5	16909524	16909693	(164628566)	C	THE1B	LTR/ERVL-MaLR	(209)	155	1	3075754
2357	16.3	2.9	0.5	chr5	16909703	16910110	(164628149)	+	MSTB1	LTR/ERVL-MaLR	15	432	(0)	3075756
461	28.5	13.6	0.9	chr5	17302763	17302992	(164235267)	C	L1ME4b	LINE/L1	(227)	665	402	3076589
642	15.8	0.0	0.0	chr5	17304333	17304427	(164233832)	C	MER44B	DNA/TcMar-Tigger	(2)	548	454	3076593
713	19.7	4.1	0.0	chr5	17304429	17304570	(164233689)	C	MER44B	DNA/TcMar-Tigger	(285)	265	118	3076593
2694	12.3	3.3	0.7	chr5	17344329	17344678	(164193581)	+	MSTA	LTR/ERVL-MaLR	1	364	(64)	3076675
1242	15.8	4.0	7.3	chr5	18792015	18792248	(162746011)	C	AluJr	SINE/Alu	(66)	246	21	3078511
2111	14.3	1.7	4.1	chr5	18792249	18792613	(162745646)	+	LTR18A	LTR/ERVL	2	357	(0)	3078512
2256	11.8	11.2	0.5	chr5	31225403	31225784	(150312475)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3094623
480	23.1	2.2	4.3	chr5	32157341	32157480	(149380779)	C	MIR	SINE/MIR	(15)	247	111	3096277
969	26.4	8.9	3.5	chr5	32261284	32261762	(149276497)	+	L2a	LINE/L2	2919	3425	(1)	3096506
1009	27.3	16.5	2.0	chr5	32311620	32312100	(149226159)	+	L2a	LINE/L2	2854	3425	(1)	3096590
2014	23.4	3.2	3.5	chr5	36078749	36079756	(145458503)	C	L1PA17	LINE/L1	(4799)	2136	1227	3102260
273	32.8	3.7	1.5	chr5	36502669	36502801	(145035458)	+	AmnSINE1	SINE/5S-Deu-L2	268	403	(172)	3102913
446	28.8	0.8	0.8	chr5	36744029	36744161	(144794098)	+	MIR	SINE/MIR	2	134	(128)	3103276
267	29.0	3.4	1.0	chr5	36744489	36744589	(144793670)	C	MIRb	SINE/MIR	(101)	107	5	3103277
463	25.6	19.9	2.1	chr5	36875101	36875387	(144662872)	C	L2a	LINE/L2	(3)	3423	3073	3103484
241	26.1	4.3	1.1	chr5	36875441	36875529	(144662730)	C	L2a	LINE/L2	(509)	2910	2819	3103484
18	27.2	4.9	1.2	chr5	36876605	36876685	(144661574)	+	(CGG)n	Simple_repeat	1	85	(0)	3103485
14	13.2	2.9	2.8	chr5	36876818	36876852	(144661407)	+	(CTCC)n	Simple_repeat	1	36	(0)	3103486
279	21.9	7.9	4.5	chr5	38106805	38106938	(143431321)	+	MamTip1	DNA/hAT-Tip100	77	215	(52)	3105574
21	0.0	0.0	0.0	chr5	43122247	43122269	(138415990)	+	(T)n	Simple_repeat	1	23	(0)	3112577
2441	15.0	2.5	2.8	chr5	43560216	43560648	(137977611)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3113274
11	24.1	2.6	0.0	chr5	43603102	43603140	(137935119)	+	G-rich	Low_complexity	1	40	(0)	3113334
34	5.3	0.0	0.0	chr5	50666898	50666937	(130871322)	+	(CCT)n	Simple_repeat	1	40	(0)	3116800
14	5.0	0.0	0.0	chr5	51373992	51374012	(130164247)	+	(CTG)n	Simple_repeat	1	21	(0)	3117655
13	24.7	2.9	5.6	chr5	51378574	51378642	(130159617)	+	(CTC)n	Simple_repeat	1	71	(0)	3117657
11	24.5	2.2	2.2	chr5	51383048	51383092	(130155167)	+	(GCGCAG)n	Simple_repeat	1	46	(0)	3117660
15	12.4	0.0	7.3	chr5	51383105	51383145	(130155114)	+	GA-rich	Low_complexity	1	41	(0)	3117661
2379	15.3	3.7	1.0	chr5	54249951	54250366	(127287893)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3121424
18	22.0	2.9	4.2	chr5	55173295	55173363	(126364896)	+	(CCCCG)n	Simple_repeat	1	71	(0)	3122809
13	17.8	5.3	0.0	chr5	56816853	56816890	(124721369)	+	(TTTGGAA)n	Simple_repeat	1	40	(0)	3125611
1965	17.4	6.4	1.0	chr5	57184278	57184678	(124353581)	C	MSTB	LTR/ERVL-MaLR	(2)	424	1	3126322
1256	21.0	1.9	2.2	chr5	57494779	57495094	(124043165)	C	MLT1H	LTR/ERVL-MaLR	(228)	321	7	3126847
249	25.2	2.4	12.1	chr5	59134014	59134154	(122404105)	+	LTR16D	LTR/ERVL	397	607	(44)	3129103
41	19.5	2.0	2.0	chr5	59236769	59236868	(122301391)	+	GA-rich	Low_complexity	1	102	(0)	3129249
22	4.0	0.0	0.0	chr5	59276123	59276148	(122262111)	+	(A)n	Simple_repeat	1	26	(0)	3129312
350	35.8	12.6	3.3	chr5	59358409	59358651	(122179608)	+	MamTip2	DNA/hAT-Tip100	12	280	(25)	3129406
232	27.8	15.3	6.5	chr5	59757427	59757580	(121780679)	C	MamTip2	DNA/hAT-Tip100	(98)	207	38	3129930
10053	14.2	2.9	1.7	chr5	60683448	60685060	(120853199)	+	L1M2	LINE/L1	4545	6180	(822)	3131173
2480	22.4	2.9	8.0	chr5	62045143	62045870	(119492389)	C	LTR8	LTR/ERV1	(1)	690	1	3133132
12	18.0	8.8	4.0	chr5	62306381	62306448	(119231811)	+	(CTCCGCC)n	Simple_repeat	1	74	(0)	3133536
23	11.5	0.0	0.0	chr5	65926105	65926142	(115612117)	+	(GGAC)n	Simple_repeat	1	38	(0)	3138689
17	4.3	0.0	0.0	chr5	72107258	72107281	(109430978)	+	(TCC)n	Simple_repeat	1	24	(0)	3148506
16	21.0	4.1	5.3	chr5	72107366	72107438	(109430821)	+	(CGCGGAG)n	Simple_repeat	1	76	(0)	3148507
339	26.2	5.4	5.4	chr5	73281532	73281660	(108256599)	C	UCON62	DNA?	(36)	141	13	3150264
274	29.1	7.2	6.0	chr5	73564558	73564707	(107973552)	+	MIR3	SINE/MIR	45	196	(12)	3150714
980	28.0	6.1	1.5	chr5	73789696	73790025	(107748234)	C	LTR40a	LTR/ERVL	(106)	413	68	3151079
586	32.5	12.0	4.5	chr5	74019634	74020663	(107517596)	C	L2c	LINE/L2	(632)	2787	1670	3151381
185	31.6	2.5	1.2	chr5	74631985	74632064	(106906195)	C	MIR3	SINE/MIR	(20)	188	108	3152263
25	10.1	2.3	0.0	chr5	74640843	74640885	(106897374)	+	(AGG)n	Simple_repeat	1	44	(0)	3152271
383	23.0	3.0	1.0	chr5	76663460	76663591	(104874668)	+	Charlie9	DNA/hAT-Charlie	1	138	(123)	3155371
1402	17.7	5.5	6.2	chr5	76787040	76787424	(104750835)	+	MLT2B4	LTR/ERVL	12	525	(42)	3155609
549	26.0	3.8	4.9	chr5	76787476	76787637	(104750622)	+	L1MEb	LINE/L1	391	550	(5520)	3155610
541	25.6	2.8	2.1	chr5	76818372	76818511	(104719748)	+	MIRb	SINE/MIR	81	221	(47)	3155687
27	16.0	1.7	1.7	chr5	77852620	77852705	(103685554)	+	GA-rich	Low_complexity	1	86	(0)	3157272
21	0.0	0.0	0.0	chr5	78527364	78527386	(103010873)	+	(T)n	Simple_repeat	1	23	(0)	3158220
182	17.1	0.0	2.8	chr5	78634576	78634611	(102903648)	+	L2c	LINE/L2	3269	3303	(84)	3158357
385	24.1	12.4	2.8	chr5	78638542	78638686	(102899573)	+	MamSINE1	SINE/tRNA-RTE	22	182	(108)	3158365
403	33.2	10.4	2.3	chr5	78638751	78639101	(102899158)	+	L3	LINE/CR1	3201	3583	(516)	3158366
15	19.9	5.4	3.4	chr5	78648612	78648667	(102889592)	+	GA-rich	Low_complexity	1	59	(0)	3158377
13	18.6	4.3	4.1	chr5	78648763	78648809	(102889450)	+	GA-rich	Low_complexity	1	49	(0)	3158378
13	10.0	0.0	0.0	chr5	78985153	78985174	(102553085)	+	(CAG)n	Simple_repeat	1	22	(0)	3158885
2056	11.4	0.3	3.2	chr5	79253945	79254252	(102284007)	C	AluSx1	SINE/Alu	(9)	303	5	3159429
11870	12.9	5.0	3.9	chr5	79254262	79255148	(102283111)	C	L1M1	LINE/L1	(4522)	3043	2156	3159426
415	24.6	18.1	5.0	chr5	81144672	81144891	(100393368)	C	MIR	SINE/MIR	(5)	263	6	3162745
2172	11.3	4.6	1.0	chr5	81144959	81145251	(100393008)	+	AluSp	SINE/Alu	2	305	(8)	3162746
18042	11.9	3.9	1.1	chr5	81269746	81273081	(100265178)	+	L1PB1	LINE/L1	407	3847	(3015)	3162920
193	27.2	15.0	0.8	chr5	81301263	81301388	(100236871)	+	L2b	LINE/L2	3017	3163	(212)	3162953
206	23.8	13.1	3.6	chr5	81301405	81301487	(100236772)	+	L2b	LINE/L2	3239	3330	(45)	3162953
41	13.8	3.2	3.1	chr5	81751267	81751359	(99786900)	+	(CCTC)n	Simple_repeat	1	96	(0)	3163565
16	22.3	0.0	2.3	chr5	83471655	83471698	(98066561)	+	(CCT)n	Simple_repeat	1	44	(0)	3166013
12	4.7	4.5	0.0	chr5	83473608	83473629	(98064630)	+	(AGGG)n	Simple_repeat	1	23	(0)	3166015
739	31.6	10.3	1.8	chr5	84290013	84290411	(97247848)	+	LTR16	LTR/ERVL	1	437	(1)	3167047
3545	8.1	0.2	0.2	chr5	84292760	84293218	(97245041)	C	LTR71A	LTR/ERV1	(0)	459	1	3167054
17	28.8	1.6	1.6	chr5	87267811	87267873	(94270386)	+	(CTCC)n	Simple_repeat	1	64	(0)	3170894
19	26.6	0.0	0.0	chr5	87268723	87268776	(94269483)	+	(CTG)n	Simple_repeat	1	54	(0)	3170897
49	0.0	0.0	0.0	chr5	88142197	88142238	(93396021)	+	(CA)n	Simple_repeat	1	42	(0)	3171930
201	37.5	1.1	2.2	chr5	88508841	88508930	(93029329)	+	L2c	LINE/L2	3276	3364	(23)	3172439
13	9.7	0.0	0.0	chr5	92641862	92641883	(88896376)	+	(TGT)n	Simple_repeat	1	22	(0)	3177699
248	8.6	3.6	0.2	chr5	93581669	93582088	(87956171)	+	(TC)n	Simple_repeat	1	435	(0)	3178828
17	15.2	4.3	2.1	chr5	93582091	93582136	(87956123)	+	(CCTCTC)n	Simple_repeat	1	48	(0)	3178829
17	21.0	0.0	5.5	chr5	95284055	95284109	(86254150)	+	GA-rich	Low_complexity	1	55	(0)	3180923
42	15.6	2.3	1.1	chr5	95284570	95284656	(86253603)	+	(CTC)n	Simple_repeat	1	89	(0)	3180924
22	9.5	0.0	0.0	chr5	95284666	95284699	(86253560)	+	(GCG)n	Simple_repeat	1	34	(0)	3180925
230	22.9	1.4	5.4	chr5	95555504	95555577	(85982682)	C	Charlie9	DNA/hAT-Charlie	(7)	2750	2680	3181311
311	27.0	9.1	10.2	chr5	95698559	95698793	(85839466)	+	LTR78B	LTR/ERV1	894	1125	(171)	3181533
9941	9.0	0.0	0.1	chr5	95710731	95712075	(85826184)	C	HERVS71-int	LTR/ERV1	(5742)	3236	1893	3181554
16	19.2	2.0	3.9	chr5	95731312	95731372	(85806887)	+	(GCAGCG)n	Simple_repeat	1	59	(0)	3181581
507	23.3	8.1	4.1	chr5	96745944	96746168	(84792091)	C	MIRc	SINE/MIR	(24)	244	5	3183052
270	31.9	0.0	2.1	chr5	96746197	96746292	(84791967)	C	MIRc	SINE/MIR	(28)	240	147	3183053
787	30.4	10.9	2.6	chr5	96934086	96934504	(84603755)	C	L2a	LINE/L2	(0)	3426	2969	3183365
203	28.3	1.6	1.6	chr5	96934532	96934592	(84603667)	C	L2a	LINE/L2	(526)	2893	2833	3183365
537	10.4	0.0	12.4	chr5	98770684	98770804	(82767455)	+	MER50	LTR/ERV1	499	604	(130)	3185539
15	33.0	0.0	1.8	chr5	103259272	103259326	(78278933)	+	(GC)n	Simple_repeat	1	55	(0)	3191198
13	27.9	0.0	0.0	chr5	103259393	103259435	(78278824)	+	(GCTC)n	Simple_repeat	1	43	(0)	3191199
310	22.5	10.1	0.8	chr5	104266003	104266128	(77272131)	+	MLT1G1	LTR/ERVL-MaLR	348	555	(0)	3192486
352	32.2	16.0	2.3	chr5	107487091	107487478	(74050781)	+	L2c	LINE/L2	2937	3387	(0)	3196407
21	0.0	0.0	0.0	chr5	107672507	107672529	(73865730)	+	(T)n	Simple_repeat	1	23	(0)	3196633
13	29.5	0.0	2.0	chr5	109409882	109409932	(72128327)	+	(CCT)n	Simple_repeat	1	51	(0)	3198947
1786	27.7	6.4	4.1	chr5	109468126	109468878	(72069381)	+	L1ME4b	LINE/L1	107	890	(2)	3199027
294	16.9	12.2	0.0	chr5	109469016	109469080	(72069179)	+	MER112	DNA/hAT-Charlie	1	74	(187)	3199029
474	28.7	6.7	0.0	chr5	109483289	109483469	(72054790)	+	MLT1N2	LTR/ERVL-MaLR	339	532	(30)	3199045
28	12.6	0.0	0.0	chr5	112628167	112628209	(68910050)	+	(A)n	Simple_repeat	1	43	(0)	3203027
329	21.8	2.5	3.7	chr5	112861649	112861729	(68676530)	+	MER113	DNA/hAT-Charlie	38	117	(404)	3203403
14	20.0	2.4	2.3	chr5	112922243	112922284	(68615975)	+	(GCG)n	Simple_repeat	1	43	(0)	3203525
207	29.8	16.0	5.4	chr5	113119127	113119549	(68418710)	C	L2a	LINE/L2	(14)	3412	2937	3203850
201	23.4	0.0	0.0	chr5	113212729	113212775	(68325484)	C	L2c	LINE/L2	(55)	3332	3286	3203970
13	17.0	7.5	0.0	chr5	113295040	113295079	(68243180)	+	(GCAGA)n	Simple_repeat	1	43	(0)	3204072
23	10.0	0.0	0.0	chr5	113295173	113295205	(68243054)	+	(A)n	Simple_repeat	1	33	(0)	3204073
12	20.8	0.0	2.9	chr5	115169937	115169971	(66368288)	+	G-rich	Low_complexity	1	35	(0)	3206387
13	20.3	7.8	0.0	chr5	115170211	115170261	(66367998)	+	G-rich	Low_complexity	1	55	(0)	3206388
20	19.2	3.8	0.0	chr5	115544855	115544935	(65993324)	+	G-rich	Low_complexity	1	84	(0)	3206941
193	27.5	0.0	0.0	chr5	115840968	115841007	(65697252)	+	MIR1_Amn	SINE/MIR	45	84	(146)	3207359
13	14.8	5.1	2.4	chr5	115841075	115841113	(65697146)	+	(CCTC)n	Simple_repeat	1	41	(0)	3207360
3299	29.5	3.9	5.7	chr5	117454729	117456383	(64081876)	C	L1PA17	LINE/L1	(5416)	1733	283	3209629
1692	11.7	0.0	0.0	chr5	119324091	119324304	(62213955)	+	AluSx1	SINE/Alu	99	312	(0)	3212170
57	0.0	0.0	0.0	chr5	121961699	121961747	(59576512)	+	(AC)n	Simple_repeat	1	49	(0)	3215350
13	13.2	0.0	0.0	chr5	122312220	122312244	(59226015)	+	(CGGT)n	Simple_repeat	1	25	(0)	3215736
12	28.9	0.0	0.0	chr5	122312685	122312724	(59225535)	+	(AGTAAT)n	Simple_repeat	1	40	(0)	3215737
252	30.3	0.0	6.3	chr5	122759486	122759580	(58778679)	+	L2c	LINE/L2	3256	3344	(43)	3216383
4071	27.3	7.0	7.0	chr5	123059739	123061605	(58476654)	+	HAL1	LINE/L1	13	1879	(628)	3216880
74	11.3	0.0	1.6	chr5	124679348	124679468	(56858791)	+	(TCCT)n	Simple_repeat	1	121	(0)	3218960
12	33.7	0.0	0.0	chr5	124744470	124744518	(56793741)	+	(TGC)n	Simple_repeat	1	49	(0)	3219045
17	12.5	0.0	0.0	chr5	126778227	126778260	(54759999)	+	(GC)n	Simple_repeat	1	34	(0)	3221961
280	33.3	2.0	10.0	chr5	126875783	126876002	(54662257)	C	MIRb	SINE/MIR	(37)	231	30	3222125
13	17.7	5.3	0.0	chr5	127290221	127290258	(54248001)	+	(CCACCCT)n	Simple_repeat	1	40	(0)	3222643
13	26.1	0.0	4.1	chr5	128083381	128083429	(53454830)	+	GA-rich	Low_complexity	1	49	(0)	3223722
23	17.1	0.0	0.0	chr5	129461452	129461497	(52076762)	+	(CCGCCC)n	Simple_repeat	1	46	(0)	3225348
12	18.3	2.0	7.7	chr5	132777303	132777353	(48760906)	+	(CCGCC)n	Simple_repeat	1	52	(0)	3229898
1986	14.6	0.0	0.0	chr5	132852262	132852549	(48685710)	+	AluJb	SINE/Alu	1	288	(24)	3230033
361	29.3	10.5	3.8	chr5	132852559	132852898	(48685361)	+	L2a	LINE/L2	2877	3425	(1)	3230028
295	20.6	11.0	0.0	chr5	134124972	134125044	(47413215)	+	MIRc	SINE/MIR	84	165	(103)	3231973
340	24.3	4.2	14.5	chr5	134432944	134433102	(47105157)	C	HAL1	LINE/L1	(2364)	143	2	3232559
12	18.5	3.6	6.9	chr5	134526881	134526936	(47011323)	+	(CGGCG)n	Simple_repeat	1	58	(0)	3232770
2331	7.1	0.0	5.5	chr5	134737990	134738315	(46799944)	C	AluSg	SINE/Alu	(2)	308	1	3233228
13	26.1	0.0	0.0	chr5	135034704	135034744	(46503515)	+	G-rich	Low_complexity	1	41	(0)	3233799
16	19.4	2.4	0.0	chr5	135489093	135489133	(46049126)	+	G-rich	Low_complexity	1	42	(0)	3234367
588	22.3	10.8	2.4	chr5	136075319	136075488	(45462771)	+	MER5A	DNA/hAT-Charlie	2	187	(2)	3235175
1573	26.4	7.0	8.8	chr5	136139361	136139697	(45398562)	+	L2a	LINE/L2	2443	2794	(625)	3235287
1820	16.2	0.3	5.7	chr5	136139698	136140012	(45398247)	C	AluJb	SINE/Alu	(14)	298	1	3235288
18	20.1	0.0	0.0	chr5	137753219	137753258	(43785001)	+	(CCG)n	Simple_repeat	1	40	(0)	3237461
20	17.5	5.4	1.7	chr5	137754199	137754254	(43784005)	+	GA-rich	Low_complexity	1	59	(0)	3237463
313	31.6	10.0	2.7	chr5	137889006	137889194	(43649065)	+	MIRb	SINE/MIR	2	211	(57)	3237696
13	29.8	0.0	0.0	chr5	138457445	138457489	(43080770)	+	(TGTC)n	Simple_repeat	1	45	(0)	3238903
14	12.0	0.0	3.5	chr5	138464200	138464228	(43074031)	+	GA-rich	Low_complexity	1	29	(0)	3238914
15	4.1	4.0	0.0	chr5	138465013	138465037	(43073222)	+	(AGGG)n	Simple_repeat	1	26	(0)	3238915
38	23.0	0.0	0.0	chr5	138465931	138466014	(43072245)	+	(GCA)n	Simple_repeat	1	84	(0)	3238917
232	30.7	18.5	1.2	chr5	138482603	138483011	(43055248)	C	L2c	LINE/L2	(4)	3383	2873	3238949
258	30.8	5.3	2.2	chr5	138492575	138492739	(43045520)	+	L2c	LINE/L2	3019	3190	(185)	3238971
665	9.5	5.0	0.0	chr5	138752467	138752561	(42785698)	+	AluJo	SINE/Alu	11	110	(202)	3239535
974	13.5	1.4	0.0	chr5	138752563	138752703	(42785556)	+	FRAM	SINE/Alu	18	160	(16)	3239536
283	32.7	12.0	1.0	chr5	139439598	139439804	(42098455)	+	MIRc	SINE/MIR	2	234	(34)	3240769
2641	11.5	4.7	3.1	chr5	139619873	139620221	(41918038)	C	MSTA	LTR/ERVL-MaLR	(64)	364	1	3241196
12	20.7	5.1	0.0	chr5	139660027	139660065	(41878194)	+	(GCAG)n	Simple_repeat	1	41	(0)	3241264
204	36.2	0.8	5.2	chr5	139692766	139692899	(41845360)	+	MIR3	SINE/MIR	16	143	(65)	3241316
18	4.7	0.0	0.0	chr5	139710938	139710959	(41827300)	+	(A)n	Simple_repeat	1	22	(0)	3241350
2143	11.2	0.0	0.0	chr5	139985079	139985356	(41552903)	+	AluSz	SINE/Alu	22	299	(13)	3241814
64	5.7	2.1	2.1	chr5	140042904	140042998	(41495261)	+	(TGC)n	Simple_repeat	1	97	(0)	3241898
25	26.6	2.1	2.1	chr5	140113868	140113960	(41424299)	+	G-rich	Low_complexity	1	95	(0)	3242046
61	27.6	3.0	3.6	chr5	140114062	140114330	(41423929)	+	(GGC)n	Simple_repeat	1	277	(0)	3242047
18	17.8	0.0	0.0	chr5	140115059	140115096	(41423163)	+	(AGC)n	Simple_repeat	1	38	(0)	3242048
13	18.4	0.0	0.0	chr5	140966427	140966457	(40571802)	+	(CCCCCT)n	Simple_repeat	1	31	(0)	3243428
13	4.7	0.0	4.2	chr5	142108931	142108954	(39429305)	+	(GCTC)n	Simple_repeat	1	24	(0)	3245270
558	33.5	2.0	1.4	chr5	142278959	142279181	(39259078)	+	MIR	SINE/MIR	29	256	(6)	3245624
16	0.0	0.0	0.0	chr5	142325276	142325292	(39212967)	+	(T)n	Simple_repeat	1	17	(0)	3245723
279	20.6	14.1	1.4	chr5	142325594	142325667	(39212592)	C	MamRep488	DNA/hAT-Tip100	(77)	142	58	3245724
509	31.6	20.8	7.8	chr5	142327451	142327943	(39210316)	C	L2b	LINE/L2	(30)	3345	2804	3245727
235	28.1	4.3	6.9	chr5	142357425	142357569	(39180690)	C	MIRb	SINE/MIR	(42)	226	86	3245798
288	30.4	11.4	10.8	chr5	145965659	145966293	(35571966)	C	L2b	LINE/L2	(0)	3375	2694	3251609
1142	21.5	0.0	5.8	chr5	149264419	149264709	(32273550)	+	MLT1B	LTR/ERVL-MaLR	9	282	(108)	3257330
21	15.3	2.1	5.0	chr5	149271777	149271834	(32266425)	+	G-rich	Low_complexity	1	56	(0)	3257348
23	34.1	4.3	1.8	chr5	149417372	149417533	(32120726)	+	(TCTC)n	Simple_repeat	1	169	(0)	3257691
12	22.6	0.0	2.6	chr5	149730149	149730186	(31808073)	+	(CCCCCG)n	Simple_repeat	1	38	(0)	3258409
22	20.1	4.2	2.7	chr5	149730222	149730293	(31807966)	+	(CCTC)n	Simple_repeat	1	75	(0)	3258410
17	14.8	0.0	7.7	chr5	150155041	150155092	(31383167)	+	(CTCCCCT)n	Simple_repeat	1	52	(0)	3259321
1047	26.3	14.1	2.2	chr5	150320145	150320505	(31217754)	+	MLT1I	LTR/ERVL-MaLR	1	411	(0)	3259689
888	25.4	4.4	2.8	chr5	150320506	150320523	(31217736)	C	MER113	DNA/hAT-Charlie	(457)	64	48	3259688
570	26.5	5.7	2.4	chr5	150407368	150407572	(31130687)	C	MamRep1879	DNA/hAT-Tip100?	(2)	214	3	3259859
498	26.8	14.4	0.6	chr5	150574528	150574707	(30963552)	+	MIR	SINE/MIR	54	262	(0)	3260271
323	36.4	2.1	0.9	chr5	150640418	150640650	(30897609)	C	L2c	LINE/L2	(469)	2950	2715	3260423
480	27.6	3.3	7.9	chr5	150671229	150671469	(30866790)	C	MIR	SINE/MIR	(0)	262	30	3260489
12	11.1	3.2	3.1	chr5	150778679	150778709	(30759550)	+	(GGAGCT)n	Simple_repeat	1	32	(0)	3260680
583	28.9	11.9	10.9	chr5	150782812	150783250	(30755009)	C	L2a	LINE/L2	(0)	3426	2983	3260687
294	31.2	12.5	0.7	chr5	151157894	151158048	(30380211)	C	MIR3	SINE/MIR	(3)	205	30	3261276
205	30.5	3.7	4.5	chr5	153782694	153782803	(27755456)	C	L2c	LINE/L2	(221)	3166	3058	3265882
28	34.9	2.2	3.3	chr5	154682789	154682966	(26855293)	+	(CTCCCCC)n	Simple_repeat	1	182	(0)	3267769
285	32.4	12.4	2.9	chr5	154840864	154841038	(26697221)	+	L3b	LINE/CR1	4851	5044	(188)	3268160
13	8.5	4.0	0.0	chr5	154850568	154850592	(26687667)	+	(GCT)n	Simple_repeat	1	26	(0)	3268186
197	31.4	1.9	0.9	chr5	155056718	155056823	(26481436)	C	L2b	LINE/L2	(208)	3167	3061	3268572
361	30.9	2.3	11.2	chr5	157328169	157328507	(24209752)	C	L2b	LINE/L2	(45)	3330	3023	3272515
185	22.4	1.7	4.9	chr5	157328511	157328571	(24209688)	+	MIR	SINE/MIR	145	203	(59)	3272516
197	34.5	4.3	8.3	chr5	157328649	157328841	(24209418)	C	L2b	LINE/L2	(533)	2886	2702	3272515
15	9.7	0.0	0.0	chr5	157575230	157575251	(23963008)	+	(AG)n	Simple_repeat	1	22	(0)	3272957
40	0.0	0.0	0.0	chr5	157576240	157576276	(23961983)	+	(T)n	Simple_repeat	1	37	(0)	3272958
1043	26.4	9.2	0.6	chr5	158931989	158932334	(22605925)	+	L1ME4a	LINE/L1	5461	5839	(285)	3275329
18	3.6	3.2	3.1	chr5	159208191	159208221	(22330038)	+	(AGC)n	Simple_repeat	1	32	(0)	3275706
14	9.6	0.0	0.0	chr5	159773408	159773430	(21764829)	+	(GCG)n	Simple_repeat	1	23	(0)	3276694
18	23.7	0.0	0.0	chr5	160438694	160438733	(21099526)	+	(T)n	Simple_repeat	1	40	(0)	3278157
355	29.3	5.9	3.8	chr5	160438809	160439008	(21099251)	C	MIRb	SINE/MIR	(14)	254	46	3278158
29	18.1	2.5	3.7	chr5	168291770	168291849	(13246410)	+	(GGC)n	Simple_repeat	1	82	(0)	3289721
620	22.1	12.4	3.3	chr5	171397370	171397640	(10140619)	C	L1MB8	LINE/L1	(614)	5570	5272	3295200
857	12.9	0.8	0.0	chr5	171397663	171397794	(10140465)	C	AluSz6	SINE/Alu	(178)	134	2	3295202
1761	9.8	6.0	1.4	chr5	171397800	171398086	(10140173)	C	AluSx1	SINE/Alu	(11)	301	1	3295203
325	23.7	7.0	3.1	chr5	171469566	171469661	(10068598)	+	MER124	DNA?	267	366	(31)	3295357
16	23.7	1.9	1.9	chr5	171469700	171469752	(10068507)	+	(TCCTCCT)n	Simple_repeat	1	54	(0)	3295358
12	18.1	3.1	0.0	chr5	171469728	171469759	(10068500)	+	(CTCCCC)n	Simple_repeat	1	33	(0)	3295359
214	34.8	10.1	1.1	chr5	171985100	171985288	(9552971)	+	L2c	LINE/L2	2660	2867	(552)	3296414
15	21.4	1.5	7.2	chr5	172105114	172105181	(9433078)	+	(CCCCT)n	Simple_repeat	1	69	(0)	3296684
361	26.2	0.7	6.9	chr5	172111997	172112156	(9426103)	+	L1ME3G	LINE/L1	461	610	(314)	3296699
498	24.3	1.1	3.6	chr5	172545609	172545760	(8992499)	+	MIR	SINE/MIR	90	237	(31)	3297675
437	30.1	10.1	1.2	chr5	172678288	172678539	(8859720)	+	L2a	LINE/L2	2265	2541	(878)	3297959
272	34.6	9.3	0.0	chr5	172678653	172678779	(8859480)	+	L2a	LINE/L2	2512	2651	(768)	3297959
221	31.2	1.0	9.4	chr5	172871126	172871231	(8667028)	C	L2c	LINE/L2	(162)	3213	3117	3298396
1114	28.0	9.7	1.3	chr5	172871257	172871650	(8666609)	+	L2a	LINE/L2	2969	3399	(27)	3298397
4646	16.3	4.6	3.2	chr5	173016022	173016417	(8521842)	+	MER21B	LTR/ERVL	466	862	(6)	3298749
306	21.0	0.0	1.6	chr5	173016431	173016493	(8521766)	C	MER5B	DNA/hAT-Charlie	(115)	63	2	3298751
897	23.1	2.7	2.3	chr5	173316137	173316357	(8221902)	+	MER58A	DNA/hAT-Charlie	1	222	(2)	3299405
180	36.4	5.0	5.0	chr5	174532514	174532652	(7005607)	C	MIR	SINE/MIR	(101)	161	23	3301677
21	0.0	0.0	0.0	chr5	174724414	174724436	(6813823)	+	(A)n	Simple_repeat	1	23	(0)	3302108
298	30.5	4.6	6.0	chr5	174725752	174725950	(6812309)	C	MIRc	SINE/MIR	(0)	268	73	3302110
1633	22.8	5.3	2.8	chr5	176183849	176184617	(5353642)	C	MER101-int	LTR/ERV1	(3471)	3168	2494	3304789
13	11.8	13.0	0.0	chr5	176541898	176541943	(4996316)	+	(CCAGAGCA)n	Simple_repeat	1	52	(0)	3305492
214	36.7	0.0	0.0	chr5	176543771	176543849	(4994410)	+	MIRb	SINE/MIR	117	195	(73)	3305497
450	29.1	3.2	8.5	chr5	176630697	176630861	(4907398)	+	MIRb	SINE/MIR	2	157	(111)	3305700
239	36.8	7.2	2.1	chr5	176864325	176864510	(4673749)	C	L2c	LINE/L2	(549)	2870	2675	3306133
1346	20.9	0.0	7.3	chr5	177194235	177194577	(4343682)	C	AluJb	SINE/Alu	(0)	312	6	3306908
267	35.5	10.8	0.0	chr5	177310886	177311074	(4227185)	C	L2c	LINE/L2	(155)	3232	3021	3307156
255	39.1	0.0	1.8	chr5	177402766	177402877	(4135382)	C	MIR	SINE/MIR	(43)	219	110	3307345
211	32.0	13.1	3.5	chr5	177444443	177444832	(4093427)	C	L2c	LINE/L2	(0)	3387	2919	3307429
400	23.8	11.2	0.7	chr5	177452053	177452196	(4086063)	+	L1MDa	LINE/L1	2357	2517	(4116)	3307447
14	24.3	2.0	2.0	chr5	177455933	177455982	(4082277)	+	(GCCCT)n	Simple_repeat	1	51	(0)	3307453
976	27.6	18.2	2.9	chr5	179727147	179727869	(1810390)	C	L2a	LINE/L2	(0)	3426	2570	3311468
12	24.9	5.8	0.0	chr5	179796340	179796391	(1741868)	+	(CGCGCCG)n	Simple_repeat	1	55	(0)	3311605
870	14.4	0.8	0.0	chr5	180085170	180085301	(1452958)	C	FLAM_C	SINE/Alu	(10)	133	1	3312055
551	29.3	8.4	4.0	chr5	180492444	180492863	(1045396)	C	L1MEh	LINE/L1	(1770)	465	26	3312773
2121	12.2	0.0	0.0	chr5	181098807	181099102	(439157)	C	AluSc5	SINE/Alu	(13)	296	1	3313642
187	21.1	7.3	0.0	chr5	181100166	181100203	(438056)	+	MamRTE1	LINE/RTE-BovB	2000	2040	(1772)	3313643
739	22.1	2.4	0.0	chr5	181167669	181167883	(370376)	+	L1MD2	LINE/L1	5296	5480	(762)	3313767
560	23.1	0.9	0.0	chr5	181167886	181167993	(370266)	+	FLAM_A	SINE/Alu	1	109	(33)	3313768
15	17.7	2.6	0.0	chr5	181204374	181204411	(333848)	+	G-rich	Low_complexity	1	39	(0)	3313845
796	13.4	19.9	14.8	chr5	181216926	181217208	(321051)	C	AluJr	SINE/Alu	(11)	301	1	3313879
2450	7.6	0.0	0.3	chr6	682196	682499	(170123480)	C	AluY	SINE/Alu	(8)	303	1	3315098
14	24.1	0.0	8.6	chr6	684159	684228	(170121751)	+	GA-rich	Low_complexity	1	70	(0)	3315100
1044	22.6	6.2	6.0	chr6	797852	798208	(170007771)	+	L1MB8	LINE/L1	5826	6172	(6)	3315255
99	17.5	0.0	0.0	chr6	1027672	1027849	(169778130)	+	G-rich	Low_complexity	1	178	(0)	3315528
16	5.3	0.0	0.0	chr6	1363690	1363709	(169442270)	+	(A)n	Simple_repeat	1	20	(0)	3316006
37	14.8	4.2	3.0	chr6	1382035	1382129	(169423850)	+	(GCGGAG)n	Simple_repeat	1	99	(0)	3316028
12	15.5	5.3	2.5	chr6	1388383	1388420	(169417559)	+	(CTCCCTC)n	Simple_repeat	1	40	(0)	3316035
252	31.9	4.7	5.6	chr6	1595621	1595806	(169210173)	+	Charlie2a	DNA/hAT-Charlie	30	216	(2566)	3316371
15	0.0	0.0	0.0	chr6	1597173	1597189	(169208790)	+	(AC)n	Simple_repeat	1	17	(0)	3316374
13	18.1	2.0	6.0	chr6	1607691	1607739	(169198240)	+	(GGAGGCA)n	Simple_repeat	1	50	(0)	3316385
12	30.5	3.3	0.0	chr6	1607740	1607750	(169198229)	+	G-rich	Low_complexity	1	62	(0)	3316386
11	26.4	5.6	0.0	chr6	1624316	1624369	(169181610)	+	(GCCTCCC)n	Simple_repeat	1	57	(0)	3316395
28	0.0	0.0	0.0	chr6	1624828	1624854	(169181125)	+	(T)n	Simple_repeat	1	27	(0)	3316396
2149	12.0	3.6	0.0	chr6	1810291	1810581	(168995398)	C	AluSx	SINE/Alu	(9)	303	2	3316605
14	19.0	5.0	4.8	chr6	2634350	2634409	(168171570)	+	(CCCGCAG)n	Simple_repeat	1	63	(0)	3317715
15	23.0	2.9	8.6	chr6	3118584	3118685	(167687294)	+	(GGCGG)n	Simple_repeat	1	105	(0)	3318430
28	17.7	0.0	3.2	chr6	3162495	3162557	(167643422)	+	(TCCC)n	Simple_repeat	1	63	(0)	3318495
252	31.6	8.1	7.6	chr6	3347994	3348164	(167457815)	+	L2a	LINE/L2	3179	3350	(76)	3318769
302	28.1	14.3	4.0	chr6	3438559	3438858	(167367121)	C	MamRep434	DNA/TcMar-Tigger	(3)	423	88	3318888
464	33.0	11.5	6.9	chr6	3612178	3612541	(167193438)	+	L2c	LINE/L2	2996	3378	(9)	3319162
524	21.1	6.8	2.6	chr6	3820444	3820599	(166985380)	C	MER5A1	DNA/hAT-Charlie	(3)	163	1	3319482
551	27.8	2.8	0.0	chr6	3820628	3820800	(166985179)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	3319483
718	34.6	7.3	5.4	chr6	4126265	4126802	(166679177)	C	L2b	LINE/L2	(2)	3373	2838	3320006
61	29.6	3.0	5.6	chr6	4135582	4135982	(166669997)	+	G-rich	Low_complexity	1	413	(0)	3320017
27904	2.5	0.4	0.0	chr6	4328755	4334759	(166471220)	C	L1PA3	LINE/L1	(0)	6155	125	3320287
17	9.7	2.9	2.8	chr6	5026336	5026370	(165779609)	+	G-rich	Low_complexity	1	36	(0)	3321377
17	0.0	0.0	0.0	chr6	6003588	6003608	(164802371)	+	(GGA)n	Simple_repeat	1	21	(0)	3322872
45	13.0	1.3	0.0	chr6	6006881	6006957	(164799022)	+	(AGAG)n	Simple_repeat	1	78	(0)	3322875
491	29.0	16.3	4.1	chr6	6906096	6906458	(163899521)	+	LTR33	LTR/ERVL	42	457	(58)	3324182
397	33.1	16.6	4.3	chr6	7168396	7168809	(163637170)	C	L3	LINE/CR1	(2)	4097	3623	3324708
17	4.3	0.0	0.0	chr6	7450468	7450491	(163355488)	+	(CAG)n	Simple_repeat	1	24	(0)	3325172
2145	10.0	1.1	0.0	chr6	7450594	7450914	(163355065)	C	AluSx	SINE/Alu	(0)	312	1	3325173
13	17.0	3.0	0.0	chr6	7727218	7727250	(163078729)	+	(GGCCCC)n	Simple_repeat	1	34	(0)	3325637
24	25.3	0.0	0.0	chr6	7727253	7727313	(163078666)	+	(CAG)n	Simple_repeat	1	61	(0)	3325638
1667	10.4	4.2	1.8	chr6	8934436	8934710	(161871269)	+	L1PA11	LINE/L1	5886	6167	(7)	3327411
886	18.9	4.7	7.8	chr6	9404865	9405082	(161400897)	+	MER20	DNA/hAT-Charlie	6	216	(3)	3328041
1117	20.5	4.9	3.2	chr6	10027422	10027703	(160778276)	C	Charlie5	DNA/hAT-Charlie	(2331)	293	7	3328848
504	29.3	8.5	8.3	chr6	10166859	10167185	(160638794)	+	L2a	LINE/L2	3037	3364	(62)	3329044
187	34.1	5.2	1.1	chr6	10403705	10403796	(160402183)	+	MIRb	SINE/MIR	93	188	(80)	3329444
194	25.0	1.8	1.8	chr6	10403843	10403899	(160402080)	+	MIRb	SINE/MIR	197	253	(15)	3329444
658	23.5	8.8	1.2	chr6	10613548	10613788	(160192191)	+	MER112	DNA/hAT-Charlie	1	261	(0)	3329847
308	28.8	1.8	7.5	chr6	10613817	10613936	(160192043)	C	MIR3	SINE/MIR	(85)	123	11	3329848
527	28.5	6.1	6.5	chr6	10891906	10892217	(159913762)	C	L2a	LINE/L2	(76)	3299	2986	3330399
909	15.0	0.8	1.5	chr6	11122928	11123060	(159682919)	+	AluJr	SINE/Alu	2	133	(179)	3330769
2039	12.7	1.3	0.7	chr6	11269846	11270144	(159535835)	+	AluSx	SINE/Alu	1	301	(11)	3330977
22	15.1	4.8	3.0	chr6	12009028	12009090	(158796889)	+	(GCGGAGG)n	Simple_repeat	1	66	(0)	3332068
20	10.4	0.0	0.0	chr6	13328502	13328533	(157477446)	+	(CGC)n	Simple_repeat	1	32	(0)	3334060
566	28.5	6.2	1.0	chr6	13488014	13488242	(157317737)	C	MIRb	SINE/MIR	(0)	262	14	3334350
229	29.5	11.3	1.3	chr6	13574911	13575212	(157230767)	C	L2a	LINE/L2	(689)	2730	2395	3334514
274	36.1	12.9	4.6	chr6	13614111	13614499	(157191480)	C	L2c	LINE/L2	(6)	3381	2956	3334588
483	31.9	11.9	6.3	chr6	13635852	13636160	(157169819)	C	L2c	LINE/L2	(0)	3387	3058	3334619
399	26.7	6.2	8.8	chr6	13636161	13636341	(157169638)	+	MIRc	SINE/MIR	4	179	(89)	3334620
533	32.6	2.6	7.9	chr6	13660909	13661148	(157144831)	+	L1MEi	LINE/L1	148	374	(1838)	3334654
18	19.2	2.0	2.0	chr6	13924572	13924620	(156881359)	+	(GGT)n	Simple_repeat	1	50	(0)	3335169
13	24.6	2.3	0.0	chr6	15400871	15400913	(155405066)	+	(CCTC)n	Simple_repeat	1	44	(0)	3337905
13	22.1	4.1	2.0	chr6	15551951	15551999	(155253980)	+	A-rich	Low_complexity	1	51	(0)	3338061
2057	28.4	10.4	8.2	chr6	15608366	15609318	(155196661)	C	HAL1	LINE/L1	(539)	1968	968	3338145
935	22.0	15.4	2.7	chr6	15754017	15754569	(155051410)	C	MLT2F	LTR/ERVL	(0)	663	3	3338386
2271	9.6	4.0	1.7	chr6	16726583	16726874	(154079105)	+	AluSq2	SINE/Alu	1	299	(14)	3339972
18	23.3	0.0	0.0	chr6	16760221	16760273	(154045706)	+	(CCT)n	Simple_repeat	1	53	(0)	3340013
13	8.1	3.6	3.5	chr6	16761363	16761390	(154044589)	+	(TGC)n	Simple_repeat	1	29	(0)	3340016
39	1.8	5.0	3.2	chr6	16761485	16761544	(154044435)	+	(CTC)n	Simple_repeat	1	63	(0)	3340017
2138	19.7	4.3	2.6	chr6	16770363	16770821	(154035158)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	3340027
13	15.4	5.3	2.5	chr6	17393473	17393510	(153412469)	+	(CCT)n	Simple_repeat	1	40	(0)	3341078
14	19.8	1.7	6.7	chr6	17393641	17393699	(153412280)	+	G-rich	Low_complexity	1	60	(0)	3341079
12	22.5	2.7	0.0	chr6	17687297	17687333	(153118646)	+	A-rich	Low_complexity	1	38	(0)	3341591
16	16.8	0.0	0.0	chr6	17804294	17804320	(153001659)	+	A-rich	Low_complexity	1	27	(0)	3341844
529	31.4	12.5	1.8	chr6	18118661	18118874	(152687105)	C	L3	LINE/CR1	(3672)	427	177	3342469
12	25.8	1.9	3.6	chr6	18277321	18277374	(152528605)	+	G-rich	Low_complexity	1	55	(0)	3342750
13	23.6	4.8	3.0	chr6	20212577	20212639	(150593340)	+	(CCGGC)n	Simple_repeat	1	66	(0)	3345605
16	21.3	0.0	2.2	chr6	20403564	20403608	(150402371)	+	G-rich	Low_complexity	1	45	(0)	3345988
14	0.0	8.3	0.0	chr6	21954477	21954500	(148851479)	+	(AGGC)n	Simple_repeat	1	26	(0)	3348607
12	28.7	1.9	1.9	chr6	24359983	24360035	(146445944)	+	G-rich	Low_complexity	1	54	(0)	3351761
22	0.0	0.0	0.0	chr6	24584432	24584455	(146221524)	+	(A)n	Simple_repeat	1	24	(0)	3352188
1571	16.9	2.4	2.8	chr6	24778220	24778509	(146027470)	+	AluJo	SINE/Alu	2	290	(22)	3352548
331	16.7	0.0	0.0	chr6	25362028	25362081	(145443898)	+	MSTC	LTR/ERVL-MaLR	342	395	(1)	3353523
615	27.9	2.1	1.6	chr6	25497391	25497579	(145308400)	C	LTR16A	LTR/ERVL	(0)	451	262	3353721
1827	15.2	1.4	0.7	chr6	26021059	26021347	(144784632)	+	AluSx1	SINE/Alu	1	291	(21)	3354504
491	27.6	10.6	8.2	chr6	26122929	26123343	(144682636)	C	MER101	LTR/ERV1	(36)	438	13	3354667
13	27.0	4.0	3.8	chr6	26156949	26157024	(144648955)	+	(AGCCA)n	Simple_repeat	1	79	(0)	3354735
530	26.3	14.0	3.5	chr6	26170129	26170388	(144635591)	+	L2a	LINE/L2	3129	3420	(6)	3354757
2069	10.8	0.3	3.3	chr6	26568131	26568437	(144237542)	+	AluSz6	SINE/Alu	1	298	(14)	3355490
515	2.7	0.0	19.8	chr6	26568858	26568948	(144237031)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3355491
2713	5.4	0.0	0.0	chr6	27134616	27134912	(143671067)	C	AluY	SINE/Alu	(14)	297	1	3356345
20582	9.6	0.8	3.9	chr6	27188071	27190816	(143615163)	+	HERVKC4-int	LTR/ERVK	1	2671	(2591)	3356439
21	18.4	0.0	2.0	chr6	27251567	27251617	(143554362)	+	G-rich	Low_complexity	1	51	(0)	3356580
556	23.8	7.4	1.0	chr6	27252055	27252249	(143553730)	+	MIRb	SINE/MIR	26	243	(25)	3356581
644	2.7	0.0	0.0	chr6	27275210	27275284	(143530695)	C	tRNA-Ile-ATT	tRNA	(2)	75	1	3356626
2512	6.1	0.0	9.6	chr6	27549188	27549530	(143256449)	+	AluSg	SINE/Alu	1	310	(0)	3357096
2218	25.6	10.7	2.7	chr6	27565658	27566630	(143239349)	C	FordPrefect	DNA/hAT-Tip100	(464)	1219	4	3357125
651	0.0	0.0	0.0	chr6	27592821	27592892	(143213087)	C	tRNA-Met-i	tRNA	(3)	72	1	3357179
379	12.3	0.0	0.0	chr6	27608988	27609044	(143196935)	C	LTR41	LTR/ERVL	(0)	768	712	3357215
2140	21.8	10.9	2.8	chr6	27609054	27609581	(143196398)	C	LTR41	LTR/ERVL	(178)	590	15	3357215
1009	24.6	16.1	4.0	chr6	27672796	27673090	(143132889)	+	L2	LINE/L2	1073	1426	(1993)	3357342
2117	11.6	0.7	0.0	chr6	27684096	27684397	(143121582)	C	AluSx1	SINE/Alu	(8)	304	1	3357368
648	1.4	0.0	0.0	chr6	27688188	27688261	(143117718)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	3357376
695	25.9	13.8	1.3	chr6	27771209	27771443	(143034536)	C	MLT1G1	LTR/ERVL-MaLR	(3)	576	308	3357563
1050	15.7	1.7	2.1	chr6	27771605	27771809	(143034170)	+	L1MC	LINE/L1	2252	2457	(3689)	3357564
5449	11.0	3.7	0.6	chr6	28335120	28335915	(142470064)	+	LTR25	LTR/ERV1	1	821	(23)	3358463
809	20.7	0.9	15.6	chr6	28397029	28397285	(142408694)	C	MER20	DNA/hAT-Charlie	(0)	219	1	3358560
200	39.3	1.1	0.0	chr6	32667146	32667234	(138138745)	+	MIR3	SINE/MIR	58	147	(61)	3365217
820	27.3	10.5	3.2	chr6	33570669	33571073	(137234906)	+	Charlie13a	DNA/hAT-Charlie	447	884	(630)	3366760
28	0.0	0.0	0.0	chr6	33620109	33620135	(137185844)	+	(AAAC)n	Simple_repeat	1	27	(0)	3366869
13	8.5	4.0	0.0	chr6	33620136	33620160	(137185819)	+	(ACA)n	Simple_repeat	1	26	(0)	3366870
472	33.7	2.6	4.2	chr6	33752514	33752705	(137053274)	C	MIR3	SINE/MIR	(7)	201	13	3367073
708	26.0	6.8	2.7	chr6	33752716	33752932	(137053047)	+	MIRb	SINE/MIR	28	255	(7)	3367074
1146	23.9	12.4	4.4	chr6	33976565	33977201	(136828778)	+	L2a	LINE/L2	2590	3322	(104)	3367399
29	18.3	1.6	0.0	chr6	34145564	34145625	(136660354)	+	(GAGC)n	Simple_repeat	1	63	(0)	3367713
725	19.2	4.7	4.7	chr6	34526784	34526996	(136278983)	+	ORSL-2a	DNA/hAT-Tip100	29	241	(101)	3368605
736	14.3	1.7	6.3	chr6	34611103	34611245	(136194734)	C	AluJb	SINE/Alu	(172)	130	1	3368752
37	7.2	1.7	1.6	chr6	34889502	34889561	(135916418)	+	(GGC)n	Simple_repeat	1	61	(0)	3369412
12	31.3	0.0	0.0	chr6	35259735	35259781	(135546198)	+	(GCGG)n	Simple_repeat	1	47	(0)	3369993
724	32.1	9.3	4.3	chr6	35286767	35287402	(135518577)	C	L2b	LINE/L2	(0)	3375	2695	3370060
222	26.3	7.8	5.0	chr6	35360987	35361086	(135444893)	+	OldhAT1	DNA/hAT-Ac	417	519	(2329)	3370204
416	11.6	36.6	0.8	chr6	35472563	35472684	(135333295)	+	MER53	DNA/hAT	2	192	(1)	3370452
2251	7.8	1.0	4.2	chr6	35472830	35473137	(135332842)	C	AluSc8	SINE/Alu	(13)	298	1	3370453
1768	15.2	0.0	5.5	chr6	35477839	35478148	(135327831)	C	AluJr	SINE/Alu	(11)	301	9	3370461
335	28.8	13.5	5.0	chr6	35514043	35514425	(135291554)	+	L2b	LINE/L2	2832	3234	(153)	3370527
259	35.3	11.7	2.9	chr6	35726872	35727151	(135078828)	C	L2c	LINE/L2	(58)	3329	3022	3371014
14	13.4	5.9	0.0	chr6	35728153	35728160	(135077819)	+	(CGAG)n	Simple_repeat	1	36	(0)	3371016
13	31.6	0.0	0.0	chr6	35731963	35732013	(135073966)	+	G-rich	Low_complexity	1	51	(0)	3371023
250	29.9	14.5	4.5	chr6	35732360	35732513	(135073466)	C	MIRc	SINE/MIR	(55)	213	37	3371024
4785	6.0	2.2	0.0	chr6	35739134	35739754	(135066225)	C	PABL_A	LTR/ERV1	(0)	660	26	3371036
965	23.3	13.2	12.0	chr6	35739758	35740123	(135065856)	C	MER21C	LTR/ERVL	(445)	493	123	3371035
1298	26.0	5.6	7.9	chr6	35782052	35782300	(135023679)	C	L2a	LINE/L2	(240)	3186	2930	3371135
226	35.1	8.1	3.3	chr6	36227817	36227969	(134578010)	+	L3b	LINE/CR1	4710	4870	(362)	3372034
899	20.1	2.6	0.0	chr6	36302668	36302851	(134503128)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	3372201
2375	11.1	1.1	5.0	chr6	36353627	36354005	(134451974)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3372316
346	24.5	5.1	9.5	chr6	36441359	36441540	(134364439)	+	MLT1J1	LTR/ERVL-MaLR	19	192	(219)	3372525
2038	6.5	1.2	0.4	chr6	36593295	36593541	(134212438)	C	AluSx1	SINE/Alu	(63)	249	1	3372884
1658	18.9	7.7	2.8	chr6	36595382	36595778	(134210201)	C	L1MB5	LINE/L1	(58)	6116	5699	3372885
2551	4.8	0.3	0.0	chr6	36631989	36632279	(134173700)	C	AluYe5	SINE/Alu	(18)	292	1	3372958
390	34.0	10.6	2.8	chr6	36768791	36769001	(134036978)	+	MIRb	SINE/MIR	5	231	(31)	3373247
415	25.8	9.0	0.0	chr6	37023461	37023592	(133782387)	+	Tigger19b	DNA/TcMar-Tigger	46	190	(360)	3373750
7127	13.0	5.2	3.8	chr6	37221661	37222920	(133583059)	C	MER52C	LTR/ERV1	(0)	1278	1	3374268
895	27.6	6.0	11.6	chr6	37244688	37245134	(133560845)	C	MLT1H	LTR/ERVL-MaLR	(25)	524	105	3374321
585	19.8	7.6	8.5	chr6	37321090	37321310	(133484669)	C	MIR	SINE/MIR	(37)	225	1	3374477
303	31.0	7.5	5.9	chr6	37558297	37558716	(133247263)	C	L2b	LINE/L2	(93)	3282	2808	3374896
18	15.0	0.0	7.7	chr6	37697920	37697971	(133108008)	+	(CTC)n	Simple_repeat	1	52	(0)	3375151
20	22.2	7.6	2.0	chr6	37697972	37698009	(133107970)	+	(CGCT)n	Simple_repeat	3	99	(0)	3375152
1032	16.6	2.9	0.0	chr6	37940553	37940721	(132865258)	C	MSTB	LTR/ERVL-MaLR	(48)	378	205	3375667
497	29.2	10.1	4.9	chr6	38158037	38158388	(132647591)	C	L2a	LINE/L2	(617)	2802	2423	3375981
316	25.0	3.0	0.0	chr6	38627489	38627584	(132178395)	+	L2a	LINE/L2	3283	3381	(45)	3376664
341	28.8	0.8	4.1	chr6	38627615	38627737	(132178242)	+	L1ME4b	LINE/L1	769	887	(5)	3376663
1154	25.7	12.3	0.2	chr6	38850601	38851006	(131954973)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	3377081
273	28.6	6.2	0.0	chr6	38974885	38974975	(131831004)	C	MIRb	SINE/MIR	(35)	233	137	3377292
819	28.5	8.1	2.9	chr6	39060318	39060762	(131745217)	C	LTR33	LTR/ERVL	(4)	511	42	3377402
1026	26.8	6.0	5.2	chr6	39939051	39939282	(130866697)	C	MLT1I	LTR/ERVL-MaLR	(106)	305	63	3378795
14582	24.2	4.3	2.9	chr6	40201634	40207190	(130598789)	C	L1MA9	LINE/L1	(1839)	5720	401	3379074
31	8.1	0.0	0.0	chr6	40585837	40585876	(130220103)	+	(AC)n	Simple_repeat	1	40	(0)	3379729
13	15.9	0.0	9.8	chr6	41073761	41073811	(129732168)	+	(CGCC)n	Simple_repeat	1	51	(0)	3380583
228	31.7	15.2	6.3	chr6	41074295	41074597	(129731382)	C	L2c	LINE/L2	(14)	3373	3039	3380584
1450	25.9	8.7	1.5	chr6	41444414	41444871	(129361108)	C	L2a	LINE/L2	(7)	3419	2926	3381169
29	24.1	5.8	1.6	chr6	41546257	41546376	(129259603)	+	(CTCG)n	Simple_repeat	1	127	(0)	3381373
11	21.6	7.3	1.7	chr6	41734213	41734267	(129071712)	+	(GGCCAGC)n	Simple_repeat	1	59	(0)	3381713
13	11.6	0.0	6.2	chr6	41734758	41734789	(129071190)	+	GA-rich	Low_complexity	1	32	(0)	3381714
284	25.6	10.9	0.0	chr6	42042041	42042130	(128763849)	+	MER94B	DNA/hAT-Blackjack	20	120	(13)	3382407
13	20.6	2.6	0.0	chr6	42454061	42454099	(128351880)	+	(TGTCCTC)n	Simple_repeat	1	40	(0)	3383280
1672	23.7	8.2	2.7	chr6	42556367	42556740	(128249239)	C	MLT1H	LTR/ERVL-MaLR	(155)	394	2	3383512
215	31.9	0.0	4.0	chr6	42556741	42556780	(128249199)	+	MIR1_Amn	SINE/MIR	90	129	(101)	3383514
2232	9.8	3.9	0.3	chr6	42556781	42557075	(128248904)	C	AluSx1	SINE/Alu	(6)	306	1	3383515
15	15.8	0.0	5.1	chr6	42746494	42746532	(128059447)	+	(GTGG)n	Simple_repeat	1	39	(0)	3383927
12	26.2	1.7	4.9	chr6	42746533	42746547	(128059432)	+	G-rich	Low_complexity	15	61	(0)	3383928
20	25.6	2.6	2.5	chr6	42782747	42782824	(128023155)	+	G-rich	Low_complexity	1	80	(0)	3384025
490	25.4	11.8	3.1	chr6	42879266	42879448	(127926531)	C	MIR	SINE/MIR	(0)	262	65	3384265
12	11.5	3.3	3.2	chr6	43076534	43076563	(127729416)	+	(CTG)n	Simple_repeat	1	31	(0)	3384639
1663	21.9	12.8	5.4	chr6	43389934	43390521	(127415458)	+	MER21C	LTR/ERVL	263	893	(45)	3385254
15	24.6	0.0	5.2	chr6	43770925	43770982	(127034997)	+	(AGCCG)n	Simple_repeat	1	58	(0)	3385989
23	22.1	1.7	0.0	chr6	43770967	43771024	(127034955)	+	GA-rich	Low_complexity	1	59	(0)	3385990
383	29.8	11.0	6.2	chr6	43877734	43877991	(126927988)	C	MLT1K	LTR/ERVL-MaLR	(298)	297	26	3386174
19	0.0	0.0	0.0	chr6	44257013	44257033	(126548946)	+	(CT)n	Simple_repeat	1	21	(0)	3386858
2999	19.0	9.4	4.1	chr6	45415153	45415876	(125390103)	C	LTR41	LTR/ERVL	(2)	766	1	3388610
34	19.1	5.3	3.3	chr6	45422015	45422128	(125383851)	+	(GCG)n	Simple_repeat	1	120	(0)	3388617
59	4.8	0.0	0.0	chr6	45422682	45422747	(125383232)	+	(CAG)n	Simple_repeat	1	66	(0)	3388618
259	30.5	3.1	1.0	chr6	45724651	45724746	(125081233)	+	MIRb	SINE/MIR	26	123	(145)	3389063
94	0.0	1.1	1.1	chr6	46734416	46734503	(124071476)	+	(GA)n	Simple_repeat	1	89	(0)	3390627
2324	11.0	1.0	1.0	chr6	46734541	46734849	(124071130)	+	AluSc8	SINE/Alu	1	309	(2)	3390628
184	30.6	0.0	0.0	chr6	47034549	47034610	(123771369)	C	L2a	LINE/L2	(3)	3423	3362	3391121
236	42.7	1.4	1.4	chr6	47035027	47035171	(123770808)	C	MamRTE1	LINE/RTE-BovB	(382)	3430	3286	3391122
6752	15.5	3.7	2.5	chr6	47126067	47127346	(123678633)	C	L1MCa	LINE/L1	(5201)	1307	1	3391269
358	30.4	12.6	11.1	chr6	52352754	52353105	(118452874)	+	L2c	LINE/L2	3029	3386	(1)	3398411
17	13.2	6.0	7.0	chr6	52362168	52362234	(118443745)	+	(GCTCGG)n	Simple_repeat	1	71	(0)	3398425
263	34.9	8.8	1.2	chr6	52517702	52517869	(118288110)	C	MamSINE1	SINE/tRNA-RTE	(70)	220	39	3398640
16	12.0	3.9	3.7	chr6	52877573	52877612	(117928367)	+	A-rich	Low_complexity	1	40	(0)	3399191
3908	11.2	5.1	7.5	chr6	55108229	55108988	(115696991)	+	L1PB1	LINE/L1	1	741	(6122)	3402521
18241	10.6	4.5	0.5	chr6	55108986	55114280	(115691699)	+	L1PB1	LINE/L1	1355	6867	(0)	3402521
17	25.9	3.0	1.5	chr6	56529790	56529855	(114276124)	+	A-rich	Low_complexity	1	68	(0)	3404277
539	20.4	0.0	1.1	chr6	56934036	56934128	(113871851)	C	FLAM_C	SINE/Alu	(13)	130	39	3404864
482	23.0	15.5	1.0	chr6	57199251	57199443	(113606536)	+	LTR16C	LTR/ERVL	206	431	(58)	3405274
30	30.2	2.4	2.3	chr6	68635173	68635298	(102170681)	+	(GC)n	Simple_repeat	1	129	(0)	3416917
16	15.3	2.7	0.0	chr6	68635444	68635480	(102170499)	+	A-rich	Low_complexity	1	38	(0)	3416918
22	21.5	3.2	1.5	chr6	75284852	75284927	(95521052)	+	GA-rich	Low_complexity	1	77	(0)	3425988
13094	12.7	6.5	2.9	chr6	78933631	78934431	(91871548)	C	Tigger1	DNA/TcMar-Tigger	(1580)	838	1	3430592
311	28.2	9.2	10.6	chr6	79631261	79631458	(91174521)	+	L1M4b	LINE/L1	293	487	(6380)	3431532
452	31.3	3.6	2.0	chr6	81981993	81982214	(88823765)	+	MLT1G1	LTR/ERVL-MaLR	16	197	(372)	3434485
12	15.8	0.0	3.3	chr6	83859587	83859616	(86946363)	+	(CTCC)n	Simple_repeat	1	30	(0)	3437073
3334	19.5	1.1	0.9	chr6	85360715	85361366	(85444613)	C	Tigger17a	DNA/TcMar-Tigger	(0)	654	2	3438938
13	10.4	2.9	5.6	chr6	85643759	85643793	(85162186)	+	(CGCGCC)n	Simple_repeat	1	36	(0)	3439347
1101	20.3	14.9	0.0	chr6	85675401	85675651	(85130328)	C	AluJo	SINE/Alu	(17)	295	1	3439429
13	20.0	2.0	5.8	chr6	87156134	87156184	(83649795)	+	(CGCCTC)n	Simple_repeat	1	52	(0)	3441138
748	28.1	9.9	0.7	chr6	87342618	87342893	(83463086)	C	MER110	LTR/ERV1	(0)	491	188	3441395
402	26.9	8.0	0.0	chr6	87343060	87343163	(83462816)	C	MER81	DNA/hAT-Blackjack	(0)	114	2	3441396
372	31.1	12.2	6.9	chr6	87741192	87741584	(83064395)	C	L2c	LINE/L2	(40)	3347	2931	3442113
17	19.1	7.2	2.7	chr6	88166294	88166362	(82639617)	+	(TCGCTC)n	Simple_repeat	1	74	(0)	3442790
16	18.6	1.6	7.7	chr6	89080343	89080406	(81725573)	+	(TCCCCC)n	Simple_repeat	1	65	(0)	3444133
350	32.4	5.3	1.4	chr6	89133415	89133558	(81672421)	+	LTR16E2	LTR/ERVL	335	484	(84)	3444251
883	28.6	8.0	8.0	chr6	89133557	89133955	(81672024)	+	MLT1J	LTR/ERVL-MaLR	105	503	(9)	3444252
24	13.5	0.0	0.0	chr6	89411922	89411962	(81394017)	+	(CTC)n	Simple_repeat	1	41	(0)	3444714
225	29.1	9.1	5.5	chr6	89500550	89500749	(81305230)	+	MIRc	SINE/MIR	61	268	(0)	3444903
461	29.2	4.7	2.2	chr6	90187745	90187947	(80618032)	C	MIR	SINE/MIR	(10)	252	50	3446012
12	22.1	2.5	2.4	chr6	90219447	90219486	(80586493)	+	(TCTCC)n	Simple_repeat	1	41	(0)	3446052
12	7.3	10.3	0.0	chr6	90296251	90296279	(80509700)	+	(TCGGC)n	Simple_repeat	1	32	(0)	3446170
32	3.0	0.0	0.0	chr6	90296785	90296818	(80509161)	+	(GCT)n	Simple_repeat	1	34	(0)	3446171
4604	9.1	5.6	1.2	chr6	91293311	91293970	(79512009)	C	LTR8	LTR/ERV1	(0)	691	1	3447507
908	27.3	6.2	4.5	chr6	95087477	95087810	(75718169)	C	AmnSINE2	SINE/tRNA-Deu	(18)	340	1	3452023
334	23.7	8.2	1.5	chr6	96898100	96898236	(73907743)	C	MER5B	DNA/hAT-Charlie	(28)	150	4	3454286
32	27.8	3.2	2.2	chr6	98834564	98834680	(71971299)	+	GA-rich	Low_complexity	1	118	(0)	3456774
56	8.4	0.0	0.0	chr6	98835245	98835321	(71970658)	+	(GCAGCA)n	Simple_repeat	1	77	(0)	3456777
12	8.0	7.4	0.0	chr6	98845843	98845869	(71960110)	+	(TCCTT)n	Simple_repeat	1	29	(0)	3456782
822	25.1	1.8	9.0	chr6	100300490	100300734	(70505245)	C	MER21C	LTR/ERVL	(624)	244	18	3458848
2322	12.2	0.0	0.0	chr6	100300735	100301046	(70504933)	C	AluSx1	SINE/Alu	(0)	312	1	3458849
321	34.0	7.6	5.9	chr6	101117294	101117790	(69688189)	C	MLT1N2	LTR/ERVL-MaLR	(1)	561	20	3459881
12	17.9	3.1	0.0	chr6	107116056	107116087	(63689892)	+	(CACA)n	Simple_repeat	1	33	(0)	3468220
216	25.6	27.5	3.5	chr6	107713263	107713404	(63092575)	+	MIR3	SINE/MIR	9	197	(11)	3469254
2190	13.0	0.0	0.0	chr6	107952476	107952776	(62853203)	+	AluSx1	SINE/Alu	1	301	(11)	3469646
24	23.5	3.6	2.3	chr6	107958112	107958194	(62847785)	+	(GCC)n	Simple_repeat	1	86	(0)	3469654
11	21.6	0.0	4.9	chr6	108166449	108166489	(62639490)	+	(TTCTTCC)n	Simple_repeat	1	41	(0)	3470082
835	22.2	8.2	5.4	chr6	108657884	108658107	(62147872)	+	MER8	DNA/TcMar-Tigger	1	231	(8)	3470941
181	24.6	0.0	3.4	chr6	109691574	109691632	(61114347)	+	OldhAT1	DNA/hAT-Ac	1898	1954	(894)	3472534
353	29.9	12.4	4.0	chr6	110650589	110650816	(60155163)	C	L2a	LINE/L2	(250)	3176	2931	3474027
656	23.1	3.9	7.1	chr6	111781010	111781219	(59024760)	+	MIR	SINE/MIR	59	261	(1)	3476180
12	31.3	2.6	3.8	chr6	111872300	111872376	(58933603)	+	G-rich	Low_complexity	1	79	(0)	3476291
12	16.9	2.9	2.8	chr6	111873420	111873454	(58932525)	+	(GCT)n	Simple_repeat	1	36	(0)	3476294
2454	20.0	6.3	1.3	chr6	112225476	112226016	(58579963)	C	MER97c	DNA/hAT-Tip100	(559)	570	1	3476800
259	41.2	6.0	1.5	chr6	112226032	112226302	(58579677)	+	L2c	LINE/L2	2624	2907	(512)	3476797
89	5.4	0.8	2.4	chr6	113637198	113637319	(57168660)	+	(CTTT)n	Simple_repeat	1	123	(0)	3478794
26	0.0	0.0	0.0	chr6	113970946	113970970	(56835009)	+	(CTG)n	Simple_repeat	1	25	(0)	3479422
1685	12.2	16.0	0.9	chr6	114764714	114765036	(56040943)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3480568
8109	12.5	0.8	1.0	chr6	114765037	114766154	(56039825)	C	L1PA16	LINE/L1	(962)	5184	4065	3480567
2185	17.0	10.9	3.8	chr6	116526867	116527235	(54278744)	+	MER34	LTR/ERV1	1	407	(135)	3482683
297	29.0	12.7	2.7	chr6	117072973	117073192	(53732787)	+	L2c	LINE/L2	3105	3349	(38)	3483434
16	20.0	4.3	0.0	chr6	117265452	117265497	(53540482)	+	(CCCCCG)n	Simple_repeat	1	48	(0)	3483669
305	27.8	12.9	8.8	chr6	118651557	118651749	(52154230)	C	L1M4b	LINE/L1	(6265)	602	401	3485446
2556	12.8	6.5	1.2	chr6	119060588	119060992	(51744987)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3486056
13	12.0	5.0	4.8	chr6	125749637	125749676	(45056303)	+	(AGCCGC)n	Simple_repeat	1	42	(0)	3494761
388	31.2	8.1	7.3	chr6	125844887	125845118	(44960861)	C	MIRb	SINE/MIR	(16)	252	19	3494909
182	30.1	4.6	2.4	chr6	129708920	129709004	(41096975)	C	L2a	LINE/L2	(4)	3422	3336	3499824
306	32.8	5.6	0.7	chr6	129936504	129936638	(40869341)	+	MIR3	SINE/MIR	6	147	(61)	3500170
15	31.1	4.4	2.1	chr6	130018460	130018550	(40787429)	+	(CAG)n	Simple_repeat	1	95	(0)	3500309
292	17.9	0.0	1.8	chr6	133764477	133764533	(37041446)	+	HAL1b	LINE/L1	2347	2402	(19)	3505672
28	27.7	2.2	1.1	chr6	133764553	133764642	(37041337)	+	GA-rich	Low_complexity	1	92	(0)	3505673
16	5.3	0.0	0.0	chr6	134318508	134318527	(36487452)	+	(AC)n	Simple_repeat	1	20	(0)	3506660
337	17.8	2.7	0.0	chr6	134464697	134464769	(36341210)	C	Alu	SINE/Alu	(3)	298	224	3506968
239	20.7	20.4	7.6	chr6	136230400	136230530	(34575449)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	459	3509549
393	27.8	10.9	1.9	chr6	137218071	137218228	(33587751)	+	MIR	SINE/MIR	7	180	(82)	3511129
15	4.7	0.0	0.0	chr6	138693080	138693101	(32112878)	+	(GGC)n	Simple_repeat	1	22	(0)	3513359
30	34.8	0.0	0.0	chr6	139373348	139373463	(31432516)	+	(GCC)n	Simple_repeat	1	116	(0)	3514554
248	14.6	0.0	0.0	chr6	139981966	139982006	(30823973)	+	LTR91	LTR/ERVL	88	128	(71)	3515502
1252	19.8	7.9	2.8	chr6	140898220	140898542	(29907437)	C	MER61A	LTR/ERV1	(0)	341	1	3516606
13	21.6	0.0	0.0	chr6	142944530	142944561	(27861418)	+	GA-rich	Low_complexity	1	32	(0)	3519175
19	19.3	1.5	6.0	chr6	142946358	142946423	(27859556)	+	GA-rich	Low_complexity	1	67	(0)	3519180
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
255	31.2	4.3	1.8	chr6	143513337	143513450	(27292529)	+	L2c	LINE/L2	3262	3378	(9)	3519993
216	32.5	13.3	1.6	chr6	144096522	144096589	(26709390)	+	L2c	LINE/L2	2918	2996	(391)	3520849
1726	12.7	10.2	0.3	chr6	144096590	144096897	(26709082)	+	MER2	DNA/TcMar-Tigger	4	345	(0)	3520850
17	21.5	0.0	3.9	chr6	147202754	147202805	(23603174)	+	(CTTC)n	Simple_repeat	1	52	(0)	3525090
14	5.0	0.0	0.0	chr6	147204595	147204615	(23601364)	+	(GCA)n	Simple_repeat	1	21	(0)	3525092
26	29.8	2.3	3.7	chr6	149317406	149317536	(21488443)	+	(GCC)n	Simple_repeat	1	134	(0)	3528245
2200	17.7	3.8	7.4	chr6	149403542	149403975	(21402004)	C	MSTB	LTR/ERVL-MaLR	(8)	418	1	3528382
585	24.1	22.0	0.0	chr6	149755693	149755987	(21049992)	C	L2a	LINE/L2	(2)	3424	3047	3529098
12	25.9	0.0	2.3	chr6	150007205	150007247	(20798732)	+	(TGAG)n	Simple_repeat	1	43	(0)	3529504
453	33.8	4.1	0.9	chr6	150584318	150584532	(20221447)	C	MIRc	SINE/MIR	(31)	237	16	3530450
280	29.9	2.0	1.4	chr6	150592463	150592629	(20213350)	+	MIRc	SINE/MIR	53	225	(43)	3530461
637	25.8	2.6	1.9	chr6	150592803	150592956	(20213023)	C	MER63A	DNA/hAT-Blackjack	(54)	156	2	3530462
11	26.6	5.6	2.7	chr6	150599796	150599812	(20206167)	+	G-rich	Low_complexity	1	29	(46)	3530476
15	14.9	0.0	0.0	chr6	150599813	150599842	(20206137)	+	(GGGGC)n	Simple_repeat	1	30	(0)	3530477
12	28.3	4.5	1.4	chr6	150745934	150745999	(20059980)	+	(GAGAATA)n	Simple_repeat	1	69	(0)	3530673
1078	23.6	7.7	1.5	chr6	150746014	150746344	(20059635)	C	Tigger9b	DNA/TcMar-Tigger	(271)	353	1	3530671
13	29.8	1.1	6.7	chr6	150866984	150867072	(19938907)	+	(TCCT)n	Simple_repeat	1	90	(0)	3530876
13	9.1	8.1	2.5	chr6	150867077	150867113	(19938866)	+	(TCTCCCA)n	Simple_repeat	1	40	(0)	3530877
16	31.7	0.0	1.8	chr6	151390555	151390610	(19415369)	+	GA-rich	Low_complexity	1	56	(0)	3531908
15	19.7	0.0	0.0	chr6	151390627	151390655	(19415324)	+	(GC)n	Simple_repeat	1	29	(0)	3531909
18	22.0	0.0	0.0	chr6	151390648	151390705	(19415274)	+	(AGC)n	Simple_repeat	1	58	(0)	3531910
24	21.4	3.0	1.4	chr6	151391468	151391582	(19414397)	+	(GCG)n	Simple_repeat	1	116	(0)	3531914
28	19.6	2.0	6.9	chr6	151391701	151391800	(19414179)	+	(GCC)n	Simple_repeat	1	102	(0)	3531915
226	36.3	11.2	2.9	chr6	152147484	152147866	(18658113)	+	L2b	LINE/L2	2956	3374	(1)	3533109
19	19.9	3.4	1.6	chr6	152637068	152637126	(18168853)	+	(CGCCCCG)n	Simple_repeat	1	61	(0)	3533799
438	27.6	3.5	2.4	chr6	154615686	154615852	(16190127)	+	LTR16A1	LTR/ERVL	1	169	(287)	3536707
765	31.8	9.3	0.3	chr6	155016007	155016318	(15789661)	+	L1ME3G	LINE/L1	199	541	(383)	3537479
63	22.7	2.0	3.9	chr6	156777683	156777881	(14028098)	+	(GGC)n	Simple_repeat	1	203	(0)	3539994
380	20.6	3.2	2.1	chr6	157221227	157221320	(13584659)	C	L1MC4a	LINE/L1	(0)	7882	7788	3540566
47	0.0	0.0	0.0	chr6	157989428	157989467	(12816512)	+	(AT)n	Simple_repeat	1	40	(0)	3541784
377	31.5	8.6	6.3	chr6	158041029	158041265	(12764714)	C	MIRb	SINE/MIR	(3)	265	23	3541857
195	17.6	12.1	0.0	chr6	159977589	159977639	(10828340)	+	MIR3	SINE/MIR	99	156	(52)	3544929
29	32.5	0.7	3.5	chr6	165662232	165662373	(5143606)	+	(GCC)n	Simple_repeat	1	143	(0)	3552225
14	24.7	0.0	0.0	chr6	165988310	165988348	(4817631)	+	G-rich	Low_complexity	1	39	(0)	3552639
3175	23.1	8.4	9.0	chr6	166032433	166033556	(4772423)	+	L1M4a2	LINE/L1	1	1117	(1539)	3552701
15	12.2	6.2	3.9	chr6	166862557	166862604	(3943375)	+	(TCCTCCC)n	Simple_repeat	1	51	(0)	3553712
14	8.8	7.9	2.4	chr6	166862823	166862860	(3943119)	+	G-rich	Low_complexity	1	41	(0)	3553713
12	9.2	0.0	4.0	chr6	168195527	168195551	(2610428)	+	(TCC)n	Simple_repeat	1	25	(0)	3555242
14	17.6	0.0	0.0	chr7	726723	726754	(158619219)	+	(GGTGGC)n	Simple_repeat	1	32	(0)	3558809
274	34.7	6.6	0.5	chr7	999237	999436	(158346537)	C	L1M4	LINE/L1	(1207)	4939	4727	3559175
286	26.4	4.4	0.0	chr7	1432513	1432599	(157913374)	+	MIRc	SINE/MIR	62	152	(116)	3559909
12	13.5	0.0	7.9	chr7	1815119	1815156	(157530817)	+	(CCTCCC)n	Simple_repeat	1	38	(0)	3560537
227	18.8	0.0	0.0	chr7	2758183	2758230	(156587743)	C	Charlie1b	DNA/hAT-Charlie	(92)	431	384	3561945
1544	9.8	0.0	0.5	chr7	4743880	4744083	(154601890)	C	AluSc8	SINE/Alu	(15)	296	94	3565490
1230	22.2	4.4	0.9	chr7	4744257	4744606	(154601367)	C	L1PA17	LINE/L1	(4)	6162	5800	3565491
12	14.1	3.0	2.9	chr7	4744712	4744744	(154601229)	+	(GCTCCT)n	Simple_repeat	1	34	(0)	3565492
203	25.3	13.8	0.0	chr7	5077868	5077942	(154268031)	+	L2b	LINE/L2	3263	3349	(26)	3566175
16	0.0	0.0	0.0	chr7	5423835	5423851	(153922122)	+	(A)n	Simple_repeat	1	17	(0)	3566997
13	4.1	0.0	9.7	chr7	8261747	8261777	(151084196)	+	(GGTG)n	Simple_repeat	1	31	(0)	3572278
1286	19.8	9.9	1.1	chr7	11191506	11191862	(148154111)	C	LTR37A	LTR/ERV1	(14)	412	21	3575910
1852	13.7	5.6	3.0	chr7	11191955	11192285	(148153688)	+	MER61A	LTR/ERV1	2	341	(0)	3575911
20	27.5	0.0	0.0	chr7	11832113	11832184	(147513789)	+	(GCC)n	Simple_repeat	1	72	(0)	3576681
3625	22.2	2.7	3.9	chr7	12401360	12402360	(146943613)	+	L1MB8	LINE/L1	5202	6178	(0)	3577326
23	24.8	5.1	4.0	chr7	19117129	19117246	(140228727)	+	(CGC)n	Simple_repeat	1	124	(0)	3586149
12	4.8	4.5	0.0	chr7	21028586	21028607	(138317366)	+	(AAAT)n	Simple_repeat	1	23	(0)	3588621
16	22.8	6.6	0.0	chr7	21428284	21428344	(137917629)	+	(CTCC)n	Simple_repeat	1	65	(0)	3589266
14	30.1	0.0	3.3	chr7	25862595	25862654	(133483319)	+	GA-rich	Low_complexity	1	60	(0)	3596031
15	11.9	0.0	9.1	chr7	25940999	25941042	(133404931)	+	GA-rich	Low_complexity	1	44	(0)	3596139
210	31.6	9.4	4.9	chr7	25941181	25941365	(133404608)	+	MIR	SINE/MIR	20	219	(11)	3596140
1064	24.1	2.7	2.7	chr7	25944855	25945153	(133400820)	+	LTR33	LTR/ERVL	184	482	(33)	3596152
388	29.7	8.1	2.5	chr7	26155743	26155939	(133190034)	+	MIRb	SINE/MIR	22	230	(38)	3596521
22	17.0	3.2	3.1	chr7	27156072	27156134	(132189839)	+	(CCGCGCC)n	Simple_repeat	1	65	(0)	3598069
16	18.4	7.0	1.6	chr7	27171689	27171745	(132174228)	+	A-rich	Low_complexity	1	61	(0)	3598080
11	13.2	5.7	2.7	chr7	27186727	27186761	(132159212)	+	(CACAGAG)n	Simple_repeat	1	37	(0)	3598094
52	23.8	1.4	1.4	chr7	27199827	27199967	(132146006)	+	(GCC)n	Simple_repeat	1	143	(0)	3598103
20	19.6	3.3	1.6	chr7	27200141	27200200	(132145773)	+	G-rich	Low_complexity	1	62	(0)	3598104
18	4.8	0.0	0.0	chr7	28099358	28099379	(131246594)	+	(T)n	Simple_repeat	1	22	(0)	3599487
2333	9.9	0.3	0.0	chr7	28099482	28099775	(131246198)	C	AluSp	SINE/Alu	(18)	295	1	3599488
2052	25.1	6.5	1.6	chr7	28103468	28104450	(131241523)	+	L2a	LINE/L2	2391	3426	(0)	3599494
29	21.3	1.0	6.0	chr7	28179714	28179812	(131166161)	+	(CCCCGG)n	Simple_repeat	1	100	(0)	3599622
13	0.0	0.0	0.0	chr7	28179858	28179874	(131166099)	+	(GGC)n	Simple_repeat	1	17	(0)	3599623
2983	31.5	5.7	2.0	chr7	28324200	28325174	(131020799)	+	L2a	LINE/L2	1802	2819	(600)	3599897
21	3.0	0.0	7.5	chr7	28409184	28409223	(130936750)	+	(GCGGG)n	Simple_repeat	1	40	(0)	3600024
308	28.6	14.6	10.9	chr7	28409963	28410264	(130935709)	+	L1M4b	LINE/L1	223	537	(6330)	3600026
302	32.3	6.7	4.2	chr7	28435043	28435259	(130910714)	+	MIRc	SINE/MIR	6	216	(14)	3600062
16	22.5	3.7	6.0	chr7	28685950	28686030	(130659943)	+	(GAGAGC)n	Simple_repeat	1	84	(0)	3600424
1189	26.2	6.9	4.5	chr7	29811327	29811837	(129534136)	C	L4_A_Mam	LINE/RTE-X	(19)	4971	4448	3602161
1052	29.4	15.1	1.3	chr7	30743427	30744356	(128601617)	+	L2a	LINE/L2	2089	3168	(258)	3603587
20	30.8	3.2	1.0	chr7	35801370	35801462	(123544511)	+	(GGC)n	Simple_repeat	1	96	(0)	3611239
17	33.0	0.0	3.6	chr7	35801781	35801864	(123544109)	+	(GGC)n	Simple_repeat	1	84	(0)	3611240
12	14.8	4.9	4.7	chr7	35802795	35802835	(123543138)	+	(GGT)n	Simple_repeat	1	43	(0)	3611241
339	29.2	11.5	10.8	chr7	36130411	36130771	(123215202)	C	L2c	LINE/L2	(0)	3387	3024	3611788
41	14.3	3.9	0.0	chr7	39085708	39085797	(120260176)	+	GA-rich	Low_complexity	1	93	(0)	3616052
788	4.4	0.0	0.0	chr7	39949005	39949095	(119396878)	+	AluSp	SINE/Alu	213	303	(10)	3617483
12	28.6	0.0	0.0	chr7	39950133	39950171	(119395802)	+	GA-rich	Low_complexity	1	39	(0)	3617486
38	31.7	0.0	0.8	chr7	39950746	39950875	(119395098)	+	(GCC)n	Simple_repeat	1	130	(0)	3617487
14	27.0	4.3	2.7	chr7	39951108	39951177	(119394796)	+	(GGC)n	Simple_repeat	1	73	(0)	3617489
22	26.8	1.4	1.4	chr7	39951383	39951455	(119394518)	+	(AGC)n	Simple_repeat	1	74	(0)	3617490
1141	8.0	0.7	0.0	chr7	42857434	42857600	(116488373)	+	AluSx3	SINE/Alu	174	311	(0)	3621775
378	29.6	11.9	2.2	chr7	43041056	43041283	(116304690)	C	MIRc	SINE/MIR	(14)	254	2	3622029
12	7.9	3.2	6.2	chr7	43294367	43294397	(116051576)	+	GA-rich	Low_complexity	1	32	(0)	3622425
488	25.5	12.0	1.8	chr7	43584274	43584497	(115761476)	+	MIR	SINE/MIR	13	262	(0)	3622833
8282	9.4	3.4	1.8	chr7	43813733	43815450	(115530523)	+	HERVIP10FH-int	LTR/ERV1	1	1428	(6309)	3623227
21180	6.6	1.6	0.8	chr7	43815428	43819534	(115526439)	+	HERVIP10FH-int	LTR/ERV1	687	5102	(0)	3623227
640	16.4	13.5	2.3	chr7	43823901	43824031	(115521942)	+	HERVK22-int	LTR/ERVK	612	759	(6078)	3623224
908	15.3	0.7	0.0	chr7	43825417	43825596	(115520377)	+	HERVK22-int	LTR/ERVK	2027	2177	(3085)	3623224
321	6.5	2.1	0.0	chr7	43825613	43825658	(115520315)	+	LTR3A	LTR/ERVK	434	480	(4)	3623230
2882	16.0	0.4	1.2	chr7	44596073	44596552	(114749421)	C	MER70B	LTR/ERVL	(102)	476	1	3624492
1880	13.2	1.0	5.0	chr7	45031570	45031871	(114314102)	C	AluJb	SINE/Alu	(22)	290	1	3625385
30	17.0	2.0	7.0	chr7	55018905	55019002	(104326971)	+	(CTC)n	Simple_repeat	1	100	(0)	3638101
251	28.2	0.0	6.0	chr7	55108914	55108996	(104236977)	C	L2a	LINE/L2	(92)	3334	3257	3638206
112	8.2	5.8	4.3	chr7	55887695	55887934	(103458039)	+	(GGC)n	Simple_repeat	1	254	(0)	3639434
69	14.7	0.8	2.2	chr7	65873235	65873367	(93472606)	+	(GGC)n	Simple_repeat	1	134	(0)	3648679
13	24.4	3.5	3.4	chr7	66628916	66628972	(92717001)	+	(CCGC)n	Simple_repeat	1	59	(0)	3650449
425	28.2	11.7	1.5	chr7	67625221	67625630	(91720343)	C	MamGypLTR3	LTR/Gypsy	(92)	889	340	3652646
1986	12.2	4.3	2.4	chr7	69503319	69503613	(89842360)	C	AluSz	SINE/Alu	(11)	301	1	3656836
1112	30.8	8.7	7.7	chr7	69503614	69503802	(89842171)	C	LTR16E2	LTR/ERVL	(354)	214	5	3656835
12	21.7	0.0	2.9	chr7	69598809	69598843	(89747130)	+	(TCTCC)n	Simple_repeat	1	35	(0)	3657062
14	19.8	0.0	2.7	chr7	69598883	69598919	(89747054)	+	(TCC)n	Simple_repeat	1	37	(0)	3657063
25	30.6	2.5	2.4	chr7	69599418	69599473	(89746500)	+	(CTCCCCT)n	Simple_repeat	1	84	(39)	3657064
12	22.8	2.5	2.4	chr7	69599474	69599513	(89746460)	+	(TTTC)n	Simple_repeat	1	41	(0)	3657065
25	30.6	2.5	2.4	chr7	69599514	69599537	(89746436)	+	(CTCCCCT)n	Simple_repeat	85	123	(0)	3657064
18	4.8	0.0	0.0	chr7	69600536	69600557	(89745416)	+	(T)n	Simple_repeat	1	22	(0)	3657069
13	13.6	9.8	0.0	chr7	69600594	69600634	(89745339)	+	G-rich	Low_complexity	1	45	(0)	3657070
221	29.0	0.0	11.5	chr7	69643589	69643701	(89702272)	+	L2b	LINE/L2	3270	3369	(6)	3657142
317	17.9	0.0	2.9	chr7	69643752	69643820	(89702153)	+	MLT1B	LTR/ERVL-MaLR	1	67	(307)	3657143
330	32.3	7.1	9.5	chr7	70133368	70133641	(89212332)	C	L2b	LINE/L2	(0)	3375	3109	3657918
279	29.0	2.0	2.0	chr7	73579108	73579209	(85766764)	C	MIRc	SINE/MIR	(60)	208	107	3664959
189	30.8	7.1	0.0	chr7	73683366	73683430	(85662543)	+	MamRTE1	LINE/RTE-BovB	857	926	(2886)	3665233
2364	9.8	0.3	0.0	chr7	74079564	74079869	(85266104)	+	AluSx1	SINE/Alu	1	307	(5)	3666135
1929	17.1	9.6	0.3	chr7	74234565	74234951	(85111022)	+	MSTB1	LTR/ERVL-MaLR	6	432	(0)	3666542
865	25.1	3.8	6.5	chr7	77519593	77519975	(81825998)	C	L2a	LINE/L2	(96)	3330	2959	3673929
2438	22.3	4.0	2.4	chr7	77520051	77520683	(81825290)	C	MER20B	DNA/hAT-Charlie	(1)	782	139	3673930
484	30.8	12.6	3.7	chr7	77542743	77543255	(81802718)	C	L2	LINE/L2	(916)	2503	1939	3673980
12	23.6	1.8	5.4	chr7	79453994	79454048	(79891925)	+	(GGAGCCG)n	Simple_repeat	1	56	(0)	3676792
290	30.8	9.5	0.0	chr7	81685028	81685160	(77660813)	+	MLT1I	LTR/ERVL-MaLR	26	172	(239)	3679848
254	32.4	9.3	6.1	chr7	81685235	81685631	(77660342)	+	L2a	LINE/L2	2881	3304	(122)	3679849
13	15.5	5.6	0.0	chr7	90403208	90403243	(68942730)	+	(TTTTG)n	Simple_repeat	1	38	(0)	3691026
539	33.8	10.8	1.7	chr7	90706431	90706782	(68639191)	C	L2b	LINE/L2	(19)	3356	2969	3691524
16	8.7	0.0	0.0	chr7	91940884	91940908	(67405065)	+	(GGC)n	Simple_repeat	1	25	(0)	3693107
17	9.0	10.2	1.9	chr7	92836604	92836652	(66509321)	+	(GGCGGAG)n	Simple_repeat	1	54	(0)	3694480
40	14.6	6.8	5.8	chr7	93053721	93053887	(66292086)	+	GA-rich	Low_complexity	1	168	(0)	3694777
4691	26.2	11.1	9.1	chr7	94888010	94889290	(64456683)	C	MER34-int	LTR/ERV1	(6903)	1304	1	3697192
51	5.4	0.0	0.0	chr7	97006052	97006110	(62339863)	+	(GCA)n	Simple_repeat	1	59	(0)	3700154
25	3.1	0.0	0.0	chr7	97006111	97006143	(62339830)	+	(CGC)n	Simple_repeat	1	33	(0)	3700155
31	3.1	0.0	0.0	chr7	97006233	97006265	(62339708)	+	(CAC)n	Simple_repeat	1	33	(0)	3700157
30	13.9	3.0	2.9	chr7	97024723	97024789	(62321184)	+	GA-rich	Low_complexity	1	69	(0)	3700172
365	26.4	11.6	9.2	chr7	97928815	97929288	(61416685)	C	L2b	LINE/L2	(11)	3364	2897	3701516
4134	16.5	7.9	13.2	chr7	98116560	98117239	(61228734)	C	L1MC3	LINE/L1	(0)	7785	7066	3701962
499	17.4	0.0	0.0	chr7	98477411	98477490	(60868483)	+	MER66B	LTR/ERV1	2	81	(405)	3702688
13	31.4	1.3	3.9	chr7	98802344	98802419	(60543554)	+	G-rich	Low_complexity	1	77	(0)	3703434
185	42.9	5.0	2.8	chr7	99398749	99399002	(59946971)	+	L3	LINE/CR1	3830	4089	(10)	3704653
236	16.7	0.0	2.0	chr7	100016761	100016809	(59329164)	+	L2a	LINE/L2	3375	3422	(4)	3705691
646	20.9	11.5	21.0	chr7	100122077	100122182	(59223791)	C	MIR	SINE/MIR	(139)	123	4	3705893
277	10.9	0.0	0.0	chr7	100149689	100149734	(59196239)	+	MADE1	DNA/TcMar-Mariner	1	46	(34)	3705968
2077	12.2	2.7	0.0	chr7	100236898	100237184	(59108789)	+	AluSx1	SINE/Alu	9	303	(9)	3706117
13	29.4	0.0	0.0	chr7	100435798	100435843	(58910130)	+	(GCCCGCC)n	Simple_repeat	1	46	(0)	3706569
29	2.2	5.9	3.7	chr7	100479256	100479306	(58866667)	+	(CTC)n	Simple_repeat	1	54	(0)	3706677
17	30.0	0.0	0.0	chr7	100479352	100479408	(58866565)	+	(CTGCTG)n	Simple_repeat	1	57	(0)	3706678
12	18.3	0.0	3.0	chr7	100603022	100603054	(58742919)	+	(CTCC)n	Simple_repeat	1	33	(0)	3706931
17	21.1	4.2	4.7	chr7	100951476	100951547	(58394426)	+	G-rich	Low_complexity	1	71	(0)	3707713
20	21.4	2.8	4.1	chr7	101085609	101085679	(58260294)	+	G-rich	Low_complexity	1	73	(0)	3707964
26	8.1	0.0	4.7	chr7	101126906	101126948	(58219025)	+	(AC)n	Simple_repeat	1	43	(0)	3708051
14	15.4	7.9	4.4	chr7	101167243	101167305	(58178668)	+	GA-rich	Low_complexity	1	68	(0)	3708144
348	28.3	0.9	6.0	chr7	101602707	101602879	(57743094)	C	MIRc	SINE/MIR	(99)	169	3	3709208
12	20.2	0.0	0.0	chr7	101729806	101729820	(57616153)	+	(GCTTTG)n	Simple_repeat	1	15	(0)	3709519
1782	14.6	1.7	2.3	chr7	101729821	101730122	(57615851)	C	AluJr	SINE/Alu	(12)	300	1	3709520
730	26.7	11.2	4.0	chr7	102061909	102062205	(57283768)	C	MLT1I	LTR/ERVL-MaLR	(18)	393	73	3710228
2130	13.0	1.0	0.0	chr7	102294027	102294327	(57051646)	C	AluJb	SINE/Alu	(8)	304	1	3710668
248	29.2	0.0	0.0	chr7	102319672	102319736	(57026237)	C	L3	LINE/CR1	(920)	3179	3115	3710727
460	32.4	6.5	1.7	chr7	102319930	102320105	(57025868)	+	MIRb	SINE/MIR	41	225	(43)	3710729
721	25.6	0.9	8.2	chr7	105270348	105270410	(54075563)	+	MIRb	SINE/MIR	22	72	(196)	3715425
1731	16.3	8.8	4.4	chr7	105358740	105359150	(53986823)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	2	3715627
2030	13.5	0.0	0.0	chr7	105359151	105359457	(53986516)	C	AluSc8	SINE/Alu	(0)	311	1	3715628
568	31.9	11.6	4.3	chr7	105805473	105805895	(53540078)	C	L2b	LINE/L2	(0)	3375	2918	3716612
29	10.0	5.7	4.0	chr7	105876591	105876663	(53469310)	+	G-rich	Low_complexity	1	74	(0)	3716733
35	25.8	2.4	5.8	chr7	106112281	106112449	(53233524)	+	G-rich	Low_complexity	1	173	(0)	3717117
401	30.6	7.2	3.0	chr7	106216910	106217359	(53128614)	C	L2a	LINE/L2	(6)	3420	2896	3717298
312	27.9	9.8	7.3	chr7	106285214	106285391	(53060582)	C	L1M4b	LINE/L1	(6487)	380	198	3717380
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
15	24.9	0.0	5.2	chr7	108456439	108456496	(50889477)	+	(CCCCGC)n	Simple_repeat	1	58	(0)	3720552
1586	22.9	6.8	2.0	chr7	114048049	114048441	(45297532)	+	MER21-int	LTR/ERVL	2	414	(3777)	3727879
26	9.7	0.0	4.2	chr7	114087607	114087654	(45258319)	+	(GCG)n	Simple_repeat	1	48	(0)	3727933
19	13.2	1.8	6.9	chr7	116526466	116526522	(42819451)	+	(TCCGCCC)n	Simple_repeat	1	58	(0)	3731165
410	27.4	9.8	5.7	chr7	116934879	116935122	(42410851)	+	MLT1J	LTR/ERVL-MaLR	107	361	(151)	3731803
312	29.5	6.5	7.9	chr7	117012718	117012857	(42333116)	C	MIRb	SINE/MIR	(130)	138	1	3731960
11	24.1	2.6	0.0	chr7	117020253	117020291	(42325682)	+	(TCCTGC)n	Simple_repeat	1	40	(0)	3731967
291	28.6	5.9	8.9	chr7	118081015	118081260	(41264713)	C	L2c	LINE/L2	(210)	3177	2940	3733420
311	29.0	10.3	8.0	chr7	120842291	120842489	(38503484)	C	L2a	LINE/L2	(2)	3424	3182	3736886
304	28.1	4.0	1.0	chr7	120842472	120842568	(38503405)	C	MIR	SINE/MIR	(139)	123	24	3736882
14	12.5	0.0	0.0	chr7	120857964	120857989	(38487984)	+	(CCG)n	Simple_repeat	1	26	(0)	3736916
18	4.8	0.0	0.0	chr7	120857994	120858015	(38487958)	+	(A)n	Simple_repeat	1	22	(0)	3736917
26	13.6	0.0	0.0	chr7	121330715	121330755	(38015218)	+	(A)n	Simple_repeat	1	41	(0)	3737526
36	2.7	0.0	0.0	chr7	124032403	124032440	(35313533)	+	(GCT)n	Simple_repeat	1	38	(0)	3741320
5514	8.7	0.8	6.1	chr7	128370540	128370657	(30975316)	+	L1MA3	LINE/L1	5663	5775	(530)	3747088
1050	14.7	2.6	5.2	chr7	128370658	128370851	(30975122)	+	L1PA10	LINE/L1	5980	6168	(0)	3747094
1463	15.4	9.8	4.3	chr7	128523103	128523382	(30822591)	C	AluJr4	SINE/Alu	(15)	297	1	3747443
196	29.7	5.1	2.6	chr7	128523385	128523460	(30822513)	+	L2c	LINE/L2	3279	3356	(31)	3747444
643	25.7	11.9	0.9	chr7	128523564	128523771	(30822202)	C	MIRb	SINE/MIR	(38)	230	1	3747445
15	18.3	2.1	4.2	chr7	129188540	129188586	(30157387)	+	(CTCCC)n	Simple_repeat	1	48	(0)	3748679
15	12.4	0.0	7.3	chr7	130901319	130901359	(28444614)	+	(TGCTCCC)n	Simple_repeat	1	41	(0)	3751800
1653	16.6	2.1	3.5	chr7	130917113	130917401	(28428572)	C	AluJo	SINE/Alu	(27)	285	1	3751822
24	24.7	1.5	0.0	chr7	131556574	131556640	(27789333)	+	(GCG)n	Simple_repeat	1	68	(0)	3753009
48	27.2	1.9	1.9	chr7	131630794	131630947	(27715026)	+	(TCCC)n	Simple_repeat	1	157	(0)	3753176
180	18.9	1.9	14.5	chr7	132066030	132066091	(27279882)	C	Penelope1_Vert	LINE/Penelope	(247)	840	787	3753883
196	28.9	5.2	1.4	chr7	132410357	132410473	(26935500)	C	MIR1_Amn	SINE/MIR	(98)	170	37	3754364
15	4.3	4.2	0.0	chr7	138461132	138461155	(20884818)	+	(CCG)n	Simple_repeat	1	25	(0)	3763677
773	20.6	7.2	2.2	chr7	139371231	139371453	(19974520)	+	hAT-N1_Mam	DNA/hAT-Tip100?	106	340	(0)	3765438
447	31.2	18.7	4.8	chr7	139623768	139624027	(19721946)	+	L2c	LINE/L2	347	659	(2760)	3765942
356	25.9	22.2	1.0	chr7	140451126	140451330	(18894643)	C	MLT1I	LTR/ERVL-MaLR	(53)	358	106	3767475
196	33.9	1.7	0.0	chr7	140506967	140507025	(18838948)	+	X7C_LINE	LINE/CR1	165	224	(12)	3767635
324	28.1	3.2	4.0	chr7	140597304	140597429	(18748544)	+	UCON60	Unknown	6	130	(7)	3767839
239	32.0	8.7	1.6	chr7	141550770	141551077	(17794896)	+	L2a	LINE/L2	2920	3251	(175)	3769472
17	21.6	5.6	0.0	chr7	143381260	143381313	(15964660)	+	(CTCC)n	Simple_repeat	1	57	(0)	3771838
371	28.8	12.0	2.9	chr7	144835294	144835497	(14510476)	C	MIRb	SINE/MIR	(23)	245	21	3773750
930	0.0	0.0	0.0	chr7	148983755	148983855	(10362118)	+	HY3	scRNA	1	101	(0)	3779765
189	31.0	9.1	4.6	chr7	148987805	148988044	(10357929)	+	L3b	LINE/CR1	2091	2342	(1757)	3779773
13	19.0	8.3	0.0	chr7	149027905	149027952	(10318021)	+	(CCCTCT)n	Simple_repeat	1	52	(0)	3779849
706	27.6	1.8	7.7	chr7	149127754	149128051	(10217922)	C	L1ME1	LINE/L1	(52)	6127	5848	3780096
576	32.4	9.9	3.2	chr7	149489294	149489682	(9856291)	C	L2a	LINE/L2	(3)	3423	2941	3780769
15	13.9	0.0	0.0	chr7	149626156	149626179	(9719794)	+	(T)n	Simple_repeat	1	24	(0)	3780953
383	27.4	11.5	0.7	chr7	149626236	149626382	(9719591)	C	Arthur1A	DNA/hAT-Tip100	(1)	176	12	3780954
227	27.9	3.6	2.5	chr7	149716639	149716719	(9629254)	+	L3	LINE/CR1	3664	3745	(354)	3781086
887	28.0	14.8	3.0	chr7	149854553	149855044	(9490929)	C	MLT1E2	LTR/ERVL-MaLR	(64)	563	2	3781245
369	31.1	11.1	0.0	chr7	149855500	149855676	(9490297)	C	LTR78	LTR/ERV1	(436)	868	670	3781246
427	32.1	2.1	1.4	chr7	150323695	150323836	(9022137)	C	MIR	SINE/MIR	(3)	259	117	3781883
822	19.3	1.6	8.7	chr7	150351690	150351896	(8994077)	+	AluJr	SINE/Alu	121	312	(0)	3781922
328	28.6	10.6	1.8	chr7	150351915	150352078	(8993895)	+	L1ME4b	LINE/L1	657	836	(56)	3781923
1073	21.9	2.8	1.6	chr7	150361527	150361777	(8984196)	+	MLT1D	LTR/ERVL-MaLR	249	502	(3)	3781933
14	24.1	1.7	4.9	chr7	150368680	150368686	(8977287)	+	(GCGGCC)n	Simple_repeat	1	16	(45)	3781957
13	13.1	2.7	5.3	chr7	150368687	150368723	(8977250)	+	(CGCCC)n	Simple_repeat	1	38	(0)	3781958
14	24.1	1.7	4.9	chr7	150368724	150368739	(8977234)	+	(GCGGCC)n	Simple_repeat	17	61	(0)	3781957
13	21.7	0.0	2.6	chr7	150379505	150379543	(8966430)	+	(GGCCGG)n	Simple_repeat	1	39	(0)	3781973
21	14.1	0.0	0.0	chr7	151059515	151059553	(8286420)	+	(CGCCCC)n	Simple_repeat	1	39	(0)	3782839
1327	18.5	14.6	3.0	chr7	151097547	151097851	(8248122)	C	MSTA	LTR/ERVL-MaLR	(64)	364	1	3782900
429	34.5	7.8	5.1	chr7	151110396	151110927	(8235046)	C	L2	LINE/L2	(407)	3012	2465	3782929
19	29.0	0.0	3.9	chr7	151251913	151251989	(8093984)	+	(GGCCC)n	Simple_repeat	1	77	(0)	3783106
498	16.9	3.0	2.5	chr7	151425977	151426142	(7919831)	+	Charlie9	DNA/hAT-Charlie	2	177	(84)	3783415
587	32.4	8.3	2.6	chr7	151426552	151426903	(7919070)	+	L4_A_Mam	LINE/RTE-X	4502	4875	(115)	3783417
300	31.3	5.2	3.8	chr7	151429110	151429242	(7916731)	C	MIR	SINE/MIR	(70)	192	58	3783421
14	9.3	0.0	0.0	chr7	151429750	151429772	(7916201)	+	(CAT)n	Simple_repeat	1	23	(0)	3783424
1269	15.6	9.1	5.9	chr7	151498352	151498607	(7847366)	+	AluJb	SINE/Alu	23	287	(25)	3783542
61	0.0	0.0	0.0	chr7	151875563	151875614	(7470359)	+	(GT)n	Simple_repeat	1	52	(0)	3784164
1434	30.2	6.5	6.1	chr7	152077259	152078209	(7267764)	+	L1MEg	LINE/L1	97	1052	(5032)	3784520
2000	13.1	4.9	0.0	chr7	152078210	152078500	(7267473)	C	AluSp	SINE/Alu	(7)	306	1	3784521
35319	18.8	4.1	4.9	chr7	154925107	154928743	(4417230)	C	ERV24B_Prim-int	LTR/ERV1	(1815)	3679	23	3788913
634	27.9	6.4	2.1	chr7	154928747	154929139	(4416834)	C	LTR48	LTR/ERV1	(296)	491	1	3788921
345	29.5	8.0	2.7	chr7	155205477	155205664	(4140309)	C	MIR	SINE/MIR	(36)	226	28	3789348
1937	23.4	11.7	6.0	chr7	156161125	156161266	(3184707)	C	MER97a	DNA/hAT-Tip100	(32)	858	732	3790564
1767	10.3	4.3	0.4	chr7	156951158	156951400	(2394573)	+	AluSx1	SINE/Alu	44	296	(16)	3791617
12	17.6	0.0	5.6	chr7	157010779	157010814	(2335159)	+	(CCGCC)n	Simple_repeat	1	36	(0)	3791706
905	10.7	0.8	0.0	chr7	159092639	159092759	(253214)	C	AluYc	SINE/Alu	(0)	299	178	3794074
255	27.2	9.6	3.2	chr8	6407246	6407431	(138731205)	C	MIRb	SINE/MIR	(0)	268	70	3802024
273	34.8	1.9	2.5	chr8	6515855	6516013	(138622623)	C	MIR3	SINE/MIR	(6)	202	45	3802176
249	25.8	3.2	4.8	chr8	6516046	6516171	(138622465)	C	Charlie19a	DNA/hAT-Charlie	(16)	370	247	3802177
2065	16.9	5.3	1.0	chr8	8297516	8297928	(136840708)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3804481
2304	10.8	0.0	1.6	chr8	11804595	11804908	(133333728)	C	AluSx1	SINE/Alu	(3)	309	1	3810182
1325	17.7	11.7	9.0	chr8	11807811	11808255	(133330381)	C	MER31B	LTR/ERV1	(0)	661	1	3810189
321	33.9	2.3	0.8	chr8	13297538	13297655	(131840981)	C	L2c	LINE/L2	(15)	3372	3226	3812453
450	28.2	7.8	5.0	chr8	15573368	15573774	(129564862)	C	LTR75B	LTR/ERVL	(0)	608	111	3815603
2063	13.8	13.1	7.5	chr8	17576149	17576601	(127562035)	C	MER51E	LTR/ERV1	(0)	482	1	3818391
315	28.6	0.9	3.5	chr8	17576794	17576909	(127561727)	+	LTR88b	LTR/Gypsy?	692	804	(33)	3818392
21	19.3	0.0	0.0	chr8	19817091	19817137	(125321499)	+	(CCCCGC)n	Simple_repeat	1	47	(0)	3821834
464	33.8	5.4	6.4	chr8	21781305	21781775	(123356861)	+	L2c	LINE/L2	2922	3387	(0)	3824998
49	17.4	4.1	1.6	chr8	21788807	21788927	(123349709)	+	(TCTC)n	Simple_repeat	1	126	(0)	3825006
29	3.2	0.0	0.0	chr8	22045403	22045434	(123093202)	+	(CCCAGC)n	Simple_repeat	1	32	(0)	3825488
14	17.2	0.0	6.7	chr8	22055693	22055708	(123082928)	+	(TCTCCCT)n	Simple_repeat	1	40	(0)	3825498
12	8.8	4.2	0.0	chr8	22055709	22055732	(123082904)	+	(CCTT)n	Simple_repeat	1	25	(0)	3825499
13	18.9	2.8	0.0	chr8	22066771	22066806	(123071830)	+	(GCGCCCA)n	Simple_repeat	1	37	(0)	3825520
441	37.1	0.5	5.0	chr8	22211210	22211430	(122927206)	C	MIRc	SINE/MIR	(39)	229	19	3825766
16	0.0	4.3	0.0	chr8	22392777	22392799	(122745837)	+	(CTCC)n	Simple_repeat	1	24	(0)	3826131
231	14.6	2.0	4.0	chr8	22392933	22392982	(122745654)	+	L2b	LINE/L2	3322	3370	(5)	3826132
356	19.3	18.8	0.2	chr8	22401182	22401276	(122737360)	C	MIR	SINE/MIR	(99)	109	3	3826144
338	23.8	9.5	0.0	chr8	22561601	22561705	(122576931)	+	MIRb	SINE/MIR	114	229	(39)	3826468
53	7.7	0.0	0.0	chr8	22692648	22692717	(122445919)	+	(TCCA)n	Simple_repeat	1	70	(0)	3826647
17	15.7	6.5	4.5	chr8	22692724	22692785	(122445851)	+	(TCC)n	Simple_repeat	1	66	(0)	3826648
20	15.0	3.6	6.1	chr8	22693671	22693727	(122444909)	+	GA-rich	Low_complexity	1	55	(0)	3826652
215	24.2	1.6	3.1	chr8	23067858	23067921	(122070715)	+	MIR3	SINE/MIR	102	167	(101)	3827292
28	0.0	0.0	0.0	chr8	23163417	23163443	(121975193)	+	(GAAC)n	Simple_repeat	1	27	(0)	3827474
12	26.3	0.0	5.5	chr8	24956547	24956601	(120182035)	+	GA-rich	Low_complexity	1	55	(0)	3830234
733	12.0	11.5	0.0	chr8	26374151	26374258	(118764378)	+	AluJo	SINE/Alu	1	122	(190)	3832624
35	0.0	5.4	0.0	chr8	26577982	26578018	(118560618)	+	(TC)n	Simple_repeat	1	39	(0)	3832986
225	26.6	8.9	6.5	chr8	26641836	26641988	(118496648)	C	UCON89	DNA/hAT?	(0)	242	86	3833093
1689	21.0	4.9	1.6	chr8	27932417	27932623	(117206013)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	176	3835234
66	17.8	6.0	4.8	chr8	28402203	28402437	(116736199)	+	GA-rich	Low_complexity	1	249	(0)	3836061
3673	13.7	4.0	1.3	chr8	28515221	28515825	(116622811)	C	MER50	LTR/ERV1	(12)	722	101	3836316
16	28.6	1.7	0.0	chr8	28890493	28890551	(116248085)	+	(CCTCCC)n	Simple_repeat	1	60	(0)	3837025
12	7.2	10.3	0.0	chr8	28890577	28890605	(116248031)	+	(CCCT)n	Simple_repeat	1	32	(0)	3837026
13	12.1	0.0	3.5	chr8	29348708	29348736	(115789900)	+	A-rich	Low_complexity	1	29	(0)	3837752
12	10.0	0.0	0.0	chr8	29848485	29848506	(115290130)	+	(TTCT)n	Simple_repeat	1	22	(0)	3838597
1024	15.0	13.8	6.5	chr8	30156019	30156121	(114982515)	C	AluJr	SINE/Alu	(177)	135	31	3839159
24	15.8	6.7	2.5	chr8	30384444	30384518	(114754118)	+	G-rich	Low_complexity	1	80	(0)	3839683
3675	24.4	12.8	3.7	chr8	30630575	30631028	(114507608)	+	Charlie2a	DNA/hAT-Charlie	180	650	(2211)	3840075
303	29.9	15.9	6.7	chr8	30812448	30812759	(114325877)	+	L1M4b	LINE/L1	207	552	(6315)	3840504
16	25.9	0.0	0.0	chr8	31033330	31033375	(114105261)	+	GA-rich	Low_complexity	1	46	(0)	3840914
1070	20.2	3.5	0.0	chr8	36888105	36888351	(108250285)	+	L1MCa	LINE/L1	1078	1333	(5418)	3849532
12	9.6	8.6	2.6	chr8	37303154	37303188	(107835448)	+	(GCAG)n	Simple_repeat	1	38	(0)	3850108
16	17.5	0.0	0.0	chr8	37452631	37452663	(107685973)	+	GA-rich	Low_complexity	1	33	(0)	3850344
377	24.8	11.8	7.1	chr8	37660666	37660834	(107477802)	C	MER5A	DNA/hAT-Charlie	(0)	189	12	3850728
281	26.9	9.9	4.6	chr8	37691429	37691580	(107447056)	C	L2c	LINE/L2	(88)	3299	3139	3850797
713	31.1	1.4	1.9	chr8	37785843	37786058	(107352578)	+	MIR	SINE/MIR	29	243	(19)	3850963
3858	9.6	0.2	3.2	chr8	37882203	37882739	(107255897)	+	MER41C	LTR/ERV1	1	521	(0)	3851138
2012	9.6	1.1	0.0	chr8	38412085	38412345	(106726291)	C	AluSz	SINE/Alu	(44)	268	5	3852244
10615	7.4	0.4	0.1	chr8	39031445	39032803	(106105833)	C	L1P2	LINE/L1	(4816)	1368	5	3853408
3959	11.9	2.6	0.5	chr8	39032807	39033453	(106105183)	C	L1MC1	LINE/L1	(1373)	4773	4113	3853407
13	19.8	0.0	6.5	chr8	41828226	41828271	(103310365)	+	(CCCCG)n	Simple_repeat	1	46	(0)	3857668
600	23.4	17.3	4.3	chr8	42022542	42022898	(103115738)	+	L1ME4b	LINE/L1	5441	5802	(2080)	3857994
338	34.1	12.4	3.0	chr8	50056514	50056746	(95081890)	+	MIR	SINE/MIR	5	262	(0)	3865186
16	14.4	0.0	0.0	chr8	56210928	56210958	(88927678)	+	(TTATT)n	Simple_repeat	1	31	(0)	3873666
40	0.0	0.0	0.0	chr8	58553556	58553592	(86585044)	+	(GGGCTG)n	Simple_repeat	1	37	(0)	3876759
25	21.4	6.3	2.0	chr8	60516807	60516901	(84621735)	+	G-rich	Low_complexity	1	101	(0)	3879292
19	20.3	4.5	2.9	chr8	60516917	60516982	(84621654)	+	(CGG)n	Simple_repeat	1	69	(0)	3879293
17	14.6	0.0	6.8	chr8	60517072	60517115	(84621521)	+	(CGG)n	Simple_repeat	1	44	(0)	3879294
55	0.0	0.0	0.0	chr8	60909368	60909414	(84229222)	+	(AC)n	Simple_repeat	1	47	(0)	3879873
12	13.7	10.0	0.0	chr8	63168653	63168692	(81969944)	+	(CGAGAGAG)n	Simple_repeat	1	44	(0)	3882838
31	32.4	0.0	0.0	chr8	64581360	64581463	(80557173)	+	(CGG)n	Simple_repeat	1	104	(0)	3884658
32	0.0	0.0	0.0	chr8	64581464	64581493	(80557143)	+	(GCA)n	Simple_repeat	1	30	(0)	3884659
17	23.1	1.7	3.3	chr8	66613144	66613202	(78525434)	+	(CCCGGC)n	Simple_repeat	1	60	(0)	3887700
14	15.6	5.6	0.0	chr8	66667191	66667226	(78471410)	+	(CACT)n	Simple_repeat	1	38	(0)	3887826
11	21.9	3.9	3.8	chr8	66667227	66667241	(78471395)	+	(CACTCA)n	Simple_repeat	1	53	(0)	3887827
24	24.6	0.0	0.0	chr8	68330773	68330826	(76807810)	+	(AC)n	Simple_repeat	1	54	(0)	3890566
13	13.1	0.0	0.0	chr8	69834860	69834884	(75303752)	+	(GTCT)n	Simple_repeat	1	25	(0)	3892661
700	24.4	3.9	4.3	chr8	69994842	69995026	(75143610)	C	MER45R	DNA/hAT-Tip100	(1308)	273	89	3893025
27	20.0	1.3	4.0	chr8	85177479	85177553	(59961083)	+	(GCC)n	Simple_repeat	1	76	(0)	3914155
12	12.0	3.7	0.0	chr8	94474885	94474911	(50663725)	+	(CCTC)n	Simple_repeat	1	28	(0)	3926895
22	26.5	3.2	3.1	chr8	96493672	96493766	(48644870)	+	GA-rich	Low_complexity	1	98	(0)	3930399
72	18.7	1.3	1.9	chr8	97736304	97736461	(47402175)	+	GA-rich	Low_complexity	1	160	(0)	3932291
424	30.3	4.3	1.3	chr8	97736531	97736679	(47401957)	C	MIRc	SINE/MIR	(55)	153	7	3932292
1452	16.6	9.3	14.2	chr8	97748894	97749301	(47389335)	C	MSTB1	LTR/ERVL-MaLR	(63)	402	17	3932336
183	35.4	3.0	3.0	chr8	100149880	100149978	(44988658)	+	MamRTE1	LINE/RTE-BovB	3276	3374	(438)	3936242
13	24.0	0.0	2.4	chr8	100953004	100953044	(44185592)	+	(GCCGG)n	Simple_repeat	1	41	(0)	3937837
576	20.6	8.8	1.9	chr8	101127046	101127203	(44011433)	+	MER5B	DNA/hAT-Charlie	7	176	(2)	3938201
12	32.5	0.0	6.3	chr8	102653750	102653828	(42484808)	+	GA-rich	Low_complexity	1	79	(0)	3940819
13	23.3	4.5	4.3	chr8	102653794	102653859	(42484777)	+	G-rich	Low_complexity	1	69	(0)	3940820
13	19.6	0.0	6.5	chr8	102654068	102654080	(42484556)	+	(GGCGG)n	Simple_repeat	1	45	(0)	3940822
14	13.7	3.1	0.0	chr8	102654081	102654112	(42484524)	+	G-rich	Low_complexity	1	33	(0)	3940823
12	30.4	1.7	1.7	chr8	102654760	102654817	(42483819)	+	(CCCACCT)n	Simple_repeat	1	59	(0)	3940825
12	12.0	3.7	0.0	chr8	102656127	102656153	(42482483)	+	(CCGCT)n	Simple_repeat	1	28	(0)	3940830
1441	25.6	8.6	2.2	chr8	102731086	102731672	(42406964)	+	L2a	LINE/L2	2795	3417	(9)	3940992
2354	9.7	1.9	1.0	chr8	102861213	102861521	(42277115)	C	AluSq10	SINE/Alu	(1)	312	1	3941250
376	27.5	5.5	0.0	chr8	103208198	103208317	(41930319)	C	MIRb	SINE/MIR	(32)	236	110	3941926
12	5.5	0.0	0.0	chr8	105318462	105318480	(39820156)	+	(GCG)n	Simple_repeat	1	19	(0)	3944978
12	16.3	0.0	10.0	chr8	109540007	109540075	(35598561)	+	(TCCGCCC)n	Simple_repeat	1	62	(0)	3950983
199	20.9	4.4	0.0	chr8	109645521	109645563	(35493073)	+	MIRc	SINE/MIR	20	64	(204)	3951140
16	18.9	0.0	0.0	chr8	115451941	115451976	(29686660)	+	(CCCACT)n	Simple_repeat	1	36	(0)	3958725
235	22.1	11.3	4.4	chr8	119874443	119874532	(25264104)	+	MIRb	SINE/MIR	101	197	(71)	3965548
247	32.7	9.2	5.0	chr8	120153860	120154097	(24984539)	C	MLT1K	LTR/ERVL-MaLR	(346)	249	1	3966180
21	14.7	0.0	0.0	chr8	122783046	122783083	(22355553)	+	(GGA)n	Simple_repeat	1	38	(0)	3970519
13	8.5	0.0	3.7	chr8	123395308	123395334	(21743302)	+	(GGGGA)n	Simple_repeat	1	27	(0)	3971767
265	31.4	17.5	0.7	chr8	123395476	123395613	(21743023)	+	MIR	SINE/MIR	20	185	(77)	3971768
611	23.6	4.6	2.9	chr8	124204537	124204706	(20933930)	C	MIRb	SINE/MIR	(19)	249	77	3973286
465	18.4	3.7	0.0	chr8	124438061	124438163	(20700473)	C	Arthur1C	DNA/hAT-Tip100	(0)	363	257	3973717
2065	33.0	6.0	6.4	chr8	124530804	124532085	(20606551)	C	ERV24_Prim-int	LTR/ERV1	(1652)	5923	4652	3973870
26	0.0	0.0	0.0	chr8	124532086	124532110	(20606526)	+	(GGA)n	Simple_repeat	1	25	(0)	3973875
2065	33.0	6.0	6.4	chr8	124532111	124532282	(20606354)	C	ERV24_Prim-int	LTR/ERV1	(2924)	4651	4487	3973870
466	28.8	4.8	1.2	chr8	125386665	125386826	(19751810)	+	MIRc	SINE/MIR	24	191	(77)	3975467
14	26.0	1.7	3.3	chr8	125430092	125430171	(19708465)	+	(CCCCTCT)n	Simple_repeat	1	78	(0)	3975579
21	14.6	0.0	0.0	chr8	125430292	125430329	(19708307)	+	(AGG)n	Simple_repeat	1	38	(0)	3975580
15	4.0	3.6	3.5	chr8	127738359	127738386	(17400250)	+	(CAG)n	Simple_repeat	1	29	(0)	3979959
331	29.3	13.5	0.5	chr8	130035276	130035474	(15103162)	+	L2a	LINE/L2	3193	3421	(5)	3984243
216	31.0	6.5	2.0	chr8	130520682	130520783	(14617853)	C	L2b	LINE/L2	(4)	3371	3265	3985245
18	13.5	2.2	4.3	chr8	133571802	133571846	(11566790)	+	(CCT)n	Simple_repeat	1	46	(0)	3990738
258	25.5	2.4	5.8	chr8	140469558	140469653	(4668983)	+	MER5A	DNA/hAT-Charlie	43	139	(50)	4002016
19	0.0	0.0	0.0	chr8	140479922	140479942	(4658694)	+	(T)n	Simple_repeat	1	21	(0)	4002037
324	29.8	12.4	4.5	chr8	141035557	141035844	(4102792)	+	L2c	LINE/L2	3003	3316	(71)	4003043
828	24.9	2.3	1.8	chr8	141257654	141257870	(3880766)	+	MER20	DNA/hAT-Charlie	2	219	(0)	4003387
18	27.9	7.0	0.0	chr8	142615396	142615481	(2523155)	+	GA-rich	Low_complexity	1	92	(0)	4005102
33	0.0	0.0	0.0	chr8	143952182	143952209	(1186427)	+	(AC)n	Simple_repeat	1	28	(0)	4006869
13	20.3	0.0	0.0	chr8	143952210	143952239	(1186397)	+	(GCAC)n	Simple_repeat	1	30	(0)	4006870
353	31.2	16.4	2.8	chr8	144079155	144079438	(1059198)	+	L2a	LINE/L2	3097	3426	(0)	4007076
3136	13.4	1.5	7.8	chr8	144369497	144369696	(768940)	C	LTR27B	LTR/ERV1	(400)	194	1	4007526
1526	18.0	2.8	1.1	chr8	144369717	144369805	(768831)	+	AluJr	SINE/Alu	12	106	(206)	4007529
343	30.1	12.3	3.2	chr8	144408174	144408393	(730243)	+	L2c	LINE/L2	2919	3161	(226)	4007586
292	36.0	6.4	3.0	chr8	144408817	144408982	(729654)	+	MIRb	SINE/MIR	2	173	(95)	4007591
17	20.1	8.8	0.0	chr8	144444100	144444173	(694463)	+	(CGGCCCC)n	Simple_repeat	1	80	(0)	4007630
13	30.2	0.0	0.0	chr8	144467711	144467755	(670881)	+	(CAG)n	Simple_repeat	1	45	(0)	4007646
25	31.3	1.7	2.5	chr8	144478236	144478354	(660282)	+	GA-rich	Low_complexity	1	121	(0)	4007652
473	29.4	10.9	7.6	chr8	144799392	144799658	(338978)	C	L2a	LINE/L2	(3)	3423	3139	4008119
330	28.1	1.0	1.0	chr9	2363674	2363777	(136030940)	+	MIRc	SINE/MIR	156	259	(9)	4012022
12	4.5	4.0	3.9	chr9	2621364	2621388	(135773329)	+	(CTG)n	Simple_repeat	1	26	(0)	4012375
14	21.1	3.3	4.8	chr9	4662147	4662206	(133732511)	+	(TCACC)n	Simple_repeat	1	62	(0)	4015435
15	12.4	2.7	2.6	chr9	4741857	4741893	(133652824)	+	(CTTCCTC)n	Simple_repeat	1	38	(0)	4015576
12	0.0	0.0	5.0	chr9	4741875	4741894	(133652823)	+	(CCT)n	Simple_repeat	1	20	(0)	4015577
12	18.9	7.1	0.0	chr9	6008236	6008277	(132386440)	+	(CTCCCC)n	Simple_repeat	1	45	(0)	4017398
14	23.6	0.0	4.1	chr9	6008355	6008403	(132386314)	+	G-rich	Low_complexity	1	49	(0)	4017399
11	22.9	1.7	6.8	chr9	8858018	8858075	(129536642)	+	(CTCCCG)n	Simple_repeat	1	59	(0)	4021668
34	5.3	0.0	0.0	chr9	8858086	8858125	(129536592)	+	(CTC)n	Simple_repeat	1	40	(0)	4021669
14	24.8	0.0	2.2	chr9	8858177	8858222	(129536495)	+	(CTTTCCT)n	Simple_repeat	1	46	(0)	4021670
519	27.9	10.1	1.2	chr9	13972320	13972482	(124422235)	+	MIR3	SINE/MIR	24	202	(6)	4028337
27	20.8	1.8	0.0	chr9	14322297	14322353	(124072364)	+	(GT)n	Simple_repeat	1	58	(0)	4028795
26	15.8	0.0	0.0	chr9	14693150	14693199	(123701518)	+	G-rich	Low_complexity	1	50	(0)	4029304
244	31.2	16.9	0.0	chr9	14908739	14908895	(123485822)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	4029617
479	31.4	6.1	4.0	chr9	18421320	18421495	(119973222)	C	MIRb	SINE/MIR	(69)	199	20	4034647
845	17.9	0.0	0.0	chr9	18979700	18979833	(119414884)	+	AluJo	SINE/Alu	142	275	(37)	4035343
238	25.0	7.1	0.0	chr9	18994667	18994770	(119399947)	+	MIR3	SINE/MIR	91	202	(6)	4035367
440	18.8	12.9	2.3	chr9	19154397	19154527	(119240190)	+	MER5A1	DNA/hAT-Charlie	1	147	(19)	4035709
14	15.4	6.7	2.1	chr9	19230372	19230416	(119164301)	+	(CCTC)n	Simple_repeat	1	48	(0)	4035923
16	15.8	2.2	4.3	chr9	19408910	19408955	(118985762)	+	(AGGCG)n	Simple_repeat	1	47	(0)	4036276
17	4.3	0.0	0.0	chr9	20622409	20622432	(117772285)	+	(CGCT)n	Simple_repeat	1	24	(0)	4038138
18	7.8	0.0	0.0	chr9	20622452	20622478	(117772239)	+	(AGC)n	Simple_repeat	1	27	(0)	4038139
15	22.0	1.7	5.1	chr9	20622547	20622604	(117772113)	+	G-rich	Low_complexity	1	59	(0)	4038140
26	31.5	4.0	2.5	chr9	20623863	20624013	(117770704)	+	(TTTCC)n	Simple_repeat	1	157	(0)	4038141
14	20.8	1.2	10.8	chr9	21974812	21974893	(116419824)	+	(CCG)n	Simple_repeat	1	83	(0)	4039935
438	34.1	3.8	0.0	chr9	26945514	26945689	(111449028)	+	L2c	LINE/L2	2683	2865	(554)	4046392
242	30.8	13.9	11.2	chr9	26945760	26946088	(111448629)	+	L2c	LINE/L2	3049	3387	(0)	4046392
1559	25.7	3.6	2.1	chr9	34158413	34158616	(104236101)	C	ERV3-16A3_I-int	LTR/ERVL	(1236)	3990	3787	4056865
1763	15.7	8.5	7.3	chr9	34158617	34159001	(104235716)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	4056866
20	6.9	0.0	0.0	chr9	35072557	35072587	(103322130)	+	(GGCAGC)n	Simple_repeat	1	31	(0)	4058317
2338	8.5	1.0	1.0	chr9	35645878	35646184	(102748533)	+	AluSq2	SINE/Alu	1	307	(6)	4059222
425	26.2	11.6	0.0	chr9	35657160	35657319	(102737398)	C	MIR	SINE/MIR	(38)	224	44	4059250
1628	10.6	2.1	0.8	chr9	35657504	35657740	(102736977)	+	AluJb	SINE/Alu	1	240	(72)	4059251
1088	22.9	12.9	3.2	chr9	35775185	35775554	(102619163)	C	LTR33A_	LTR/ERVL	(8)	523	113	4059406
18	0.0	0.0	0.0	chr9	37465989	37466008	(100928709)	+	(AC)n	Simple_repeat	1	20	(0)	4062718
271	37.4	1.1	0.0	chr9	37594595	37594723	(100799994)	+	MIR3	SINE/MIR	4	133	(97)	4062999
15	13.9	0.0	0.0	chr9	37937456	37937485	(100457232)	+	(A)n	Simple_repeat	1	30	(0)	4063679
2444	13.7	5.4	0.2	chr9	38184027	38184427	(100210290)	C	MSTB1	LTR/ERVL-MaLR	(13)	419	14	4064101
1264	20.4	6.4	3.9	chr9	38622686	38623067	(99771650)	C	L1MC	LINE/L1	(751)	5395	5004	4064899
14	17.1	11.9	0.0	chr9	68705180	68705238	(69689479)	+	(GGCAGCC)n	Simple_repeat	1	66	(0)	4080300
17	13.2	0.0	2.9	chr9	68780223	68780257	(69614460)	+	(CGG)n	Simple_repeat	1	35	(0)	4080421
188	26.4	15.5	1.8	chr9	69175135	69175300	(69219417)	+	LFSINE_Vert	SINE/tRNA	6	198	(261)	4081174
12	15.5	0.0	9.3	chr9	70419774	70419816	(67974901)	+	G-rich	Low_complexity	1	43	(0)	4083113
884	20.9	32.6	0.9	chr9	76456068	76456608	(61938109)	+	LTR50	LTR/ERVL	1	795	(0)	4092587
13	21.6	8.2	2.5	chr9	81689772	81689844	(56704873)	+	(TCTCC)n	Simple_repeat	1	79	(0)	4100306
13	9.7	9.1	0.0	chr9	83708270	83708302	(54686415)	+	(TGCGCGC)n	Simple_repeat	1	36	(0)	4103352
16	0.0	0.0	0.0	chr9	86947767	86947783	(51446934)	+	(T)n	Simple_repeat	1	17	(0)	4108707
1703	20.5	8.9	8.9	chr9	88090246	88090706	(50304011)	+	MER65C	LTR/ERV1	1	461	(0)	4110461
1333	12.4	5.0	5.0	chr9	90433726	90434023	(47960694)	+	MER1B	DNA/hAT-Charlie	1	298	(41)	4113818
27	19.2	10.4	0.8	chr9	90642901	90643015	(47751702)	+	(CGCCCTG)n	Simple_repeat	1	127	(0)	4114122
18	12.1	2.6	2.5	chr9	91817833	91817871	(46576846)	+	G-rich	Low_complexity	1	40	(0)	4115778
37	25.8	3.9	1.5	chr9	92147241	92147368	(46247349)	+	(CTTC)n	Simple_repeat	1	133	(0)	4116258
26	3.4	0.0	0.0	chr9	93955404	93955433	(44439284)	+	(CCGCC)n	Simple_repeat	1	30	(0)	4118816
14	17.2	5.1	0.0	chr9	93955457	93955495	(44439222)	+	GA-rich	Low_complexity	1	41	(0)	4118817
12	25.1	4.3	0.0	chr9	94822394	94822440	(43572277)	+	(TTTTG)n	Simple_repeat	1	49	(0)	4120333
307	41.6	0.0	1.2	chr9	94822533	94822695	(43572022)	C	L3b	LINE/CR1	(348)	4884	4724	4120334
23	3.7	0.0	0.0	chr9	95507906	95507933	(42886784)	+	(AC)n	Simple_repeat	1	28	(0)	4121303
28	24.6	0.0	0.0	chr9	95508033	95508095	(42886622)	+	(GT)n	Simple_repeat	1	63	(0)	4121304
23	29.0	3.3	5.1	chr9	95511220	95511269	(42883448)	+	(CTCC)n	Simple_repeat	1	65	(92)	4121310
12	14.6	0.0	5.9	chr9	95511270	95511303	(42883414)	+	(CCTTCG)n	Simple_repeat	1	34	(0)	4121311
23	29.0	3.3	5.1	chr9	95511304	95511371	(42883346)	+	(CTCC)n	Simple_repeat	66	157	(0)	4121310
641	30.5	17.5	1.8	chr9	96449180	96449563	(41945154)	+	L2a	LINE/L2	2427	2883	(536)	4122912
236	32.4	3.1	0.0	chr9	96449571	96449679	(41945038)	+	L2a	LINE/L2	3004	3117	(258)	4122912
200	21.1	0.0	3.7	chr9	96618329	96618382	(41776335)	C	MIRc	SINE/MIR	(31)	237	186	4123191
32	26.8	1.8	1.8	chr9	97983153	97983272	(40411445)	+	(CGCCG)n	Simple_repeat	1	120	(0)	4125544
307	31.5	6.7	1.3	chr9	98175446	98175644	(40219073)	+	MIRc	SINE/MIR	13	222	(46)	4125985
325	33.3	2.6	2.4	chr9	98192889	98193096	(40201621)	+	MIR	SINE/MIR	40	246	(22)	4126037
288	36.3	0.0	0.9	chr9	101487368	101487481	(36907236)	+	MamTip2	DNA/hAT-Tip100	107	219	(86)	4131780
29	24.3	5.2	3.5	chr9	106860928	106861063	(31533654)	+	(CTCCTTT)n	Simple_repeat	1	143	(0)	4139690
63	19.1	0.7	2.7	chr9	106863510	106863655	(31531062)	+	GA-rich	Low_complexity	1	147	(0)	4139695
85	1.3	0.0	0.0	chr9	106864040	106864116	(31530601)	+	(CT)n	Simple_repeat	1	77	(0)	4139698
238	23.1	1.9	0.0	chr9	109477500	109477551	(28917166)	C	Kanga11a	DNA/TcMar-Tc2	(913)	57	5	4144579
879	27.0	11.5	4.7	chr9	109499034	109499437	(28895280)	C	L2a	LINE/L2	(0)	3426	2992	4144626
386	23.0	9.3	5.1	chr9	109499457	109499619	(28895098)	+	L2a	LINE/L2	3208	3425	(1)	4144627
340	27.1	1.4	1.4	chr9	109742798	109742939	(28651778)	+	L1M6	LINE/L1	14	155	(6341)	4145039
697	27.9	9.3	7.9	chr9	109743014	109743456	(28651261)	+	L1M6	LINE/L1	310	759	(5737)	4145039
18	12.8	0.0	0.0	chr9	110049373	110049406	(28345311)	+	(GGCCCC)n	Simple_repeat	1	34	(0)	4145582
12	28.1	1.7	3.3	chr9	111525290	111525348	(26869369)	+	G-rich	Low_complexity	1	60	(0)	4148038
14	3.7	10.7	0.0	chr9	111525365	111525392	(26869325)	+	(GCT)n	Simple_repeat	1	31	(0)	4148039
712	21.8	1.6	10.1	chr9	111525455	111525663	(26869054)	C	MER20	DNA/hAT-Charlie	(12)	207	17	4148040
3692	15.2	6.4	1.2	chr9	112348156	112348809	(26045908)	+	MER50	LTR/ERV1	1	690	(44)	4149647
389	19.4	1.1	2.1	chr9	112348814	112348908	(26045809)	C	MER20	DNA/hAT-Charlie	(119)	100	7	4149646
418	28.8	11.4	2.4	chr9	113601984	113602150	(24792567)	+	MIR	SINE/MIR	56	239	(23)	4151989
285	36.8	2.5	0.8	chr9	113620438	113620555	(24774162)	C	MIR3	SINE/MIR	(0)	208	89	4152031
16	26.2	1.3	5.3	chr9	114611397	114611471	(23783246)	+	G-rich	Low_complexity	1	76	(0)	4154052
779	23.9	0.0	0.0	chr9	121234706	121234860	(17159857)	+	FRAM	SINE/Alu	4	158	(18)	4166566
185	25.6	17.0	1.3	chr9	121234919	121234997	(17159720)	+	Tigger19b	DNA/TcMar-Tigger	260	353	(197)	4166567
250	32.9	7.0	4.6	chr9	121287251	121287403	(17107314)	+	MIR3	SINE/MIR	2	158	(50)	4166676
21	23.9	0.0	0.0	chr9	121498867	121498911	(16895806)	+	(T)n	Simple_repeat	1	45	(0)	4167109
21	9.8	3.0	0.0	chr9	121612729	121612761	(16781956)	+	(GT)n	Simple_repeat	1	34	(0)	4167371
446	32.6	1.1	0.6	chr9	123686897	123687075	(14707642)	C	X2_LINE	LINE/CR1	(60)	1348	1169	4171141
442	28.4	20.2	0.6	chr9	123998529	123998691	(14396026)	C	MIRb	SINE/MIR	(31)	237	35	4171687
526	27.9	8.9	1.3	chr9	124010730	124010958	(14383759)	C	MIR	SINE/MIR	(13)	249	2	4171698
1041	11.9	1.4	0.0	chr9	124045007	124045149	(14349568)	C	AluSx3	SINE/Alu	(2)	309	165	4171779
16	15.3	0.0	5.0	chr9	124869136	124869175	(13525542)	+	(GGC)n	Simple_repeat	1	40	(0)	4173429
19	13.2	4.5	7.1	chr9	124869211	124869277	(13525440)	+	(GAGCG)n	Simple_repeat	1	70	(0)	4173430
280	27.4	15.2	2.6	chr9	126704686	126704887	(11689830)	C	L2c	LINE/L2	(212)	3175	2941	4176868
239	27.5	14.4	0.0	chr9	126791928	126792058	(11602659)	C	LTR33	LTR/ERVL	(355)	176	24	4177069
1833	12.7	7.1	0.4	chr9	126792114	126792389	(11602328)	+	AluSz	SINE/Alu	1	296	(16)	4177070
31	27.1	1.4	5.6	chr9	127785379	127785520	(10609197)	+	(GGC)n	Simple_repeat	1	144	(0)	4179013
251	28.6	12.7	6.5	chr9	127963747	127964128	(10430589)	C	L2c	LINE/L2	(10)	3365	2957	4179417
207	25.0	3.5	0.0	chr9	127964128	127964193	(10430524)	+	MIR3	SINE/MIR	81	152	(78)	4179418
13	25.2	0.0	7.7	chr9	127965552	127965616	(10429101)	+	(TCCC)n	Simple_repeat	1	65	(0)	4179423
1072	19.9	10.2	3.0	chr9	128056987	128057287	(10337430)	+	MER76	LTR/ERVL	314	638	(53)	4179678
1435	15.7	7.4	5.5	chr9	128159643	128159935	(10234782)	+	AluJb	SINE/Alu	1	299	(13)	4179863
454	31.6	7.3	2.3	chr9	128370643	128370866	(10023851)	+	L2a	LINE/L2	3165	3424	(2)	4180367
329	30.0	9.6	0.0	chr9	128370865	128371014	(10023703)	C	L2b	LINE/L2	(994)	2425	2260	4180346
264	30.7	7.9	6.0	chr9	128419479	128419627	(9975090)	C	MIRb	SINE/MIR	(22)	246	95	4180475
298	24.0	9.4	0.0	chr9	129072317	129072434	(9322283)	+	MIR3	SINE/MIR	18	155	(53)	4182028
11	20.8	0.0	2.9	chr9	129112091	129112125	(9282592)	+	(CCTCCT)n	Simple_repeat	1	35	(0)	4182106
2121	11.8	2.3	0.3	chr9	129114025	129114321	(9280396)	C	AluSz6	SINE/Alu	(8)	304	2	4182111
24	11.0	4.5	5.8	chr9	129174945	129175010	(9219707)	+	G-rich	Low_complexity	1	69	(0)	4182241
294	31.6	8.6	6.1	chr9	129406429	129406724	(8987993)	+	L2b	LINE/L2	3023	3326	(49)	4182743
15	8.1	0.0	3.6	chr9	129437271	129437298	(8957419)	+	(GGAG)n	Simple_repeat	1	28	(0)	4182820
15	19.1	0.0	2.6	chr9	129482062	129482099	(8912618)	+	GA-rich	Low_complexity	1	38	(0)	4182934
23	23.4	1.8	7.2	chr9	129488514	129488622	(8906095)	+	(CGCCC)n	Simple_repeat	1	111	(0)	4182952
1680	23.2	8.3	6.4	chr9	129582300	129582622	(8812095)	+	Charlie4a	DNA/hAT-Charlie	1	346	(162)	4183185
94	27.1	5.3	3.3	chr9	129602494	129602949	(8791768)	+	GA-rich	Low_complexity	1	480	(0)	4183227
57	0.0	5.1	0.0	chr9	129607459	129607517	(8787200)	+	(GT)n	Simple_repeat	1	62	(0)	4183238
15	23.6	5.5	0.0	chr9	130043273	130043342	(8351375)	+	(CGCCCC)n	Simple_repeat	1	73	(0)	4184178
59	18.8	0.6	5.1	chr9	130138405	130138560	(8256157)	+	(CCCTCC)n	Simple_repeat	1	157	(0)	4184390
382	33.0	4.1	0.9	chr9	130149098	130149311	(8245406)	C	L2c	LINE/L2	(152)	3235	3015	4184409
2107	12.9	0.3	2.9	chr9	130149348	130149656	(8245061)	C	AluSz	SINE/Alu	(11)	301	1	4184410
253	24.1	16.0	0.0	chr9	130176727	130176805	(8217912)	C	L2a	LINE/L2	(18)	3408	3315	4184480
53	15.9	8.3	0.0	chr9	130835649	130835781	(7558936)	+	(TC)n	Simple_repeat	1	144	(0)	4185898
186	36.2	0.0	4.2	chr9	130844139	130844210	(7550507)	C	L2	LINE/L2	(559)	2860	2792	4185917
278	34.6	1.7	7.2	chr9	130944705	130944953	(7449764)	+	LTR85c	LTR/Gypsy?	418	652	(171)	4186061
188	32.9	1.2	7.9	chr9	131096178	131096266	(7298451)	C	MIR	SINE/MIR	(72)	190	108	4186387
17	16.3	3.2	6.2	chr9	131097001	131097062	(7297655)	+	(CCTCCG)n	Simple_repeat	1	64	(0)	4186391
830	18.2	0.0	1.4	chr9	131097253	131097395	(7297322)	C	AluJb	SINE/Alu	(45)	267	127	4186392
439	31.0	10.0	6.4	chr9	131349905	131350280	(7044437)	C	L2b	LINE/L2	(1)	3386	2994	4186882
14	14.9	5.4	0.0	chr9	131393728	131393764	(7000953)	+	(CCCAGG)n	Simple_repeat	1	39	(0)	4187011
13	18.8	4.5	2.2	chr9	131393757	131393800	(7000917)	+	(CCTGGCT)n	Simple_repeat	1	46	(0)	4187012
2178	11.8	0.0	0.0	chr9	131813472	131813759	(6580958)	C	AluSx	SINE/Alu	(24)	288	1	4187769
1792	15.6	9.6	5.2	chr9	132054093	132054424	(6340293)	+	MSTB	LTR/ERVL-MaLR	1	362	(64)	4188135
1650	15.7	4.5	1.1	chr9	132054425	132054705	(6340012)	C	AluJb	SINE/Alu	(17)	295	5	4188136
219	29.3	7.7	0.0	chr9	132241539	132241695	(6153022)	C	L2b	LINE/L2	(271)	3104	2935	4188496
872	26.5	1.8	1.8	chr9	132667845	132668071	(5726646)	C	MIRb	SINE/MIR	(14)	254	28	4189284
12	18.1	0.0	3.0	chr9	132669623	132669655	(5725062)	+	(CCACT)n	Simple_repeat	1	33	(0)	4189288
285	31.9	13.6	1.0	chr9	133584631	133584823	(4809894)	C	L2c	LINE/L2	(160)	3215	2995	4190799
2280	7.9	0.0	4.9	chr9	134068967	134069295	(4325422)	C	AluSq2	SINE/Alu	(0)	313	1	4191480
654	27.6	9.5	1.6	chr9	134271626	134271868	(4122849)	+	MLT1E1A	LTR/ERVL-MaLR	417	680	(0)	4191822
240	29.7	17.4	2.6	chr9	134295998	134296187	(4098530)	+	L2b	LINE/L2	2969	3192	(183)	4191855
609	23.4	2.9	1.8	chr9	134296215	134296384	(4098333)	C	MLT1C	LTR/ERVL-MaLR	(295)	172	1	4191856
531	32.4	9.5	2.6	chr9	134374894	134375272	(4019445)	C	L2b	LINE/L2	(8)	3418	2960	4191953
12	10.0	0.0	0.0	chr9	136051029	136051050	(2343667)	+	(GGGA)n	Simple_repeat	1	22	(0)	4193970
269	32.4	1.4	3.4	chr9	136105815	136105961	(2288756)	+	AmnSINE1	SINE/5S-Deu-L2	329	472	(103)	4194034
186	39.8	2.4	1.6	chr9	136306889	136307013	(2087704)	+	MIRb	SINE/MIR	92	217	(51)	4194246
2249	12.9	0.0	0.0	chr9	136707636	136707945	(1686772)	+	AluSx	SINE/Alu	1	310	(2)	4194699
3741	32.8	3.9	3.7	chr9	136707946	136708531	(1686186)	+	HERVL40-int	LTR/ERVL	2441	3022	(2508)	4194690
16	31.9	1.3	1.3	chr9	136841414	136841488	(1553229)	+	(GCCCCCT)n	Simple_repeat	1	76	(0)	4194870
293	12.4	1.4	0.0	chr9	136949908	136949983	(1444734)	C	AluJb	SINE/Alu	(52)	81	1	4195039
249	33.2	3.6	4.0	chr9	137072091	137072284	(1322433)	+	L2c	LINE/L2	2958	3152	(235)	4195190
21	17.2	10.0	1.1	chr9	137300760	137300839	(1093878)	+	G-rich	Low_complexity	1	88	(0)	4195477
429	24.7	15.6	1.0	chr9	137437407	137437598	(957119)	+	MLT1D	LTR/ERVL-MaLR	278	502	(3)	4195638
845	34.4	12.6	5.0	chr9	137563556	137564358	(830359)	C	L2	LINE/L2	(1709)	1710	830	4195794
745	11.1	0.0	0.0	chr9	137594715	137594813	(799904)	+	AluYc	SINE/Alu	180	278	(21)	4195832
1102	16.4	11.9	0.5	chr9	137594884	137595091	(799626)	+	Tigger4a	DNA/TcMar-Tigger	1	235	(1)	4195833
15	14.4	6.0	3.8	chrX	11665780	11665829	(144375066)	+	(GAGCTG)n	Simple_repeat	1	53	(0)	4378397
557	28.7	13.0	3.8	chrX	16882808	16883126	(139157769)	C	LTR105_Mam	LTR/ERVL	(247)	353	1	4386896
20	3.9	0.0	0.0	chrX	18424724	18424750	(137616145)	+	(TGC)n	Simple_repeat	1	27	(0)	4389523
28	17.3	1.9	0.0	chrX	18424846	18424898	(137615997)	+	(TG)n	Simple_repeat	1	54	(0)	4389524
1797	8.6	14.9	0.4	chrX	23807823	23808079	(132232816)	+	AluSx3	SINE/Alu	1	301	(10)	4398129
2120	22.4	10.3	8.2	chrX	23979766	23980792	(132060103)	C	L1M4a2	LINE/L1	(1519)	1137	19	4398526
1308	31.1	13.6	3.0	chrX	23992357	23993505	(132047390)	+	L3	LINE/CR1	1695	2984	(1115)	4398546
1448	15.0	0.0	4.5	chrX	24081577	24081823	(131959072)	+	AluJb	SINE/Alu	67	302	(10)	4398753
1461	14.9	4.4	3.1	chrX	24081827	24082115	(131958780)	+	AluJr	SINE/Alu	5	297	(15)	4398754
1947	18.4	7.4	13.5	chrX	24242827	24243243	(131797652)	+	MLT1F2	LTR/ERVL-MaLR	168	560	(0)	4399133
17	16.8	2.5	0.0	chrX	24465283	24465322	(131575573)	+	(GCTGCT)n	Simple_repeat	1	41	(0)	4399580
2008	20.4	4.8	0.9	chrX	38400398	38400858	(117640037)	C	LTR16B1	LTR/ERVL	(0)	480	1	4418905
507	28.0	9.2	0.0	chrX	39782360	39782527	(116258368)	+	LTR50	LTR/ERVL	1	185	(610)	4421174
1180	29.9	6.3	4.5	chrX	39782570	39783393	(116257502)	C	HAL1ME	LINE/L1	(830)	1635	796	4421173
1769	22.2	5.8	1.3	chrX	39818631	39819087	(116221808)	C	LTR16B1	LTR/ERVL	(0)	480	2	4421249
1324	27.3	5.0	5.1	chrX	39985302	39985986	(116054909)	C	L2a	LINE/L2	(0)	3426	2736	4421576
12	25.1	4.3	0.0	chrX	40094702	40094748	(115946147)	+	(CGCGC)n	Simple_repeat	1	49	(0)	4421756
38	15.1	2.4	2.3	chrX	40097986	40098134	(115942761)	+	(TCCC)n	Simple_repeat	1	149	(0)	4421763
18	28.0	1.5	1.5	chrX	40098423	40098488	(115942407)	+	(GGC)n	Simple_repeat	1	67	(0)	4421764
186	33.9	0.0	0.0	chrX	40099157	40099215	(115941680)	C	L2a	LINE/L2	(8)	3418	3360	4421765
12	15.4	8.9	2.0	chrX	40099216	40099260	(115941635)	+	GA-rich	Low_complexity	1	49	(0)	4421766
16	11.2	0.0	0.0	chrX	40149149	40149177	(115891718)	+	(CTCTG)n	Simple_repeat	1	29	(0)	4421856
12	16.9	4.5	4.3	chrX	40154706	40154749	(115886146)	+	(GCAGG)n	Simple_repeat	1	46	(0)	4421861
193	32.9	10.8	1.4	chrX	40933967	40934108	(115106787)	+	MIRb	SINE/MIR	18	174	(94)	4423327
36	18.8	6.0	1.7	chrX	41276457	41276554	(114764341)	+	GA-rich	Low_complexity	1	102	(0)	4424008
1317	11.3	20.7	0.4	chrX	41330453	41330683	(114710212)	C	AluSz	SINE/Alu	(22)	290	1	4424159
272	31.7	13.9	2.1	chrX	41330687	41330876	(114710019)	C	MIRc	SINE/MIR	(43)	225	10	4424160
20	13.7	0.0	0.0	chrX	41333712	41333743	(114707152)	+	(A)n	Simple_repeat	1	32	(0)	4424166
14	21.1	0.0	8.6	chrX	41923440	41923497	(114117398)	+	(GCG)n	Simple_repeat	1	58	(0)	4425255
16	4.5	4.3	0.0	chrX	46710627	46710649	(109330246)	+	(AG)n	Simple_repeat	1	24	(0)	4432620
616	27.9	10.0	2.0	chrX	46710739	46711133	(109329762)	+	MamRep605	LTR?	360	789	(60)	4432621
327	33.0	7.6	7.0	chrX	46978322	46978693	(109062202)	C	L2c	LINE/L2	(129)	3258	2878	4433162
3183	7.1	4.0	0.5	chrX	47023111	47023548	(109017347)	C	L1PA11	LINE/L1	(1)	6173	5720	4433237
18	18.3	0.0	0.0	chrX	47233068	47233104	(108807791)	+	(GCG)n	Simple_repeat	1	37	(0)	4433638
13	14.8	0.0	3.1	chrX	47233316	47233347	(108807548)	+	G-rich	Low_complexity	1	32	(0)	4433639
259	29.0	4.1	0.0	chrX	47837048	47837140	(108203755)	C	L1ME3F	LINE/L1	(3059)	3087	2991	4434894
41	0.0	0.0	0.0	chrX	48631673	48631709	(107409186)	+	(CTG)n	Simple_repeat	1	37	(0)	4436505
15	18.1	0.0	0.0	chrX	48696543	48696574	(107344321)	+	(CCG)n	Simple_repeat	1	32	(0)	4436655
12	10.2	10.6	3.9	chrX	49101263	49101309	(106939586)	+	(ATCGACC)n	Simple_repeat	1	52	(0)	4437494
13	13.4	6.1	0.0	chrX	49200222	49200254	(106840641)	+	(GGCGC)n	Simple_repeat	1	35	(0)	4437694
49	18.9	1.0	0.0	chrX	49879887	49879988	(106160907)	+	(GCCCCG)n	Simple_repeat	1	103	(0)	4438517
25	9.4	0.0	0.0	chrX	53072711	53072753	(102968142)	+	(GA)n	Simple_repeat	1	43	(0)	4442999
677	25.6	3.1	5.8	chrX	53260726	53260953	(102779942)	C	MIRb	SINE/MIR	(4)	226	4	4443341
22	14.0	0.0	0.0	chrX	54495946	54495985	(101544910)	+	(GGGAG)n	Simple_repeat	1	40	(0)	4445932
822	32.7	7.8	1.8	chrX	54496520	54496914	(101543981)	+	L2b	LINE/L2	1099	1519	(1900)	4445933
2013	17.1	9.6	1.3	chrX	68492554	68492943	(87547952)	C	MSTA1	LTR/ERVL-MaLR	(0)	465	40	4456449
17	22.0	2.0	2.0	chrX	68647616	68647665	(87393230)	+	(TCCC)n	Simple_repeat	1	51	(0)	4456710
13	11.2	3.2	3.1	chrX	69165481	69165511	(86875384)	+	(GCG)n	Simple_repeat	1	32	(0)	4457675
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
28	20.7	4.3	3.1	chrX	74421368	74421461	(81619434)	+	GA-rich	Low_complexity	1	98	(0)	4465610
26	18.1	1.5	3.0	chrX	74421525	74421590	(81619305)	+	(GCA)n	Simple_repeat	1	67	(0)	4465611
46	32.8	0.6	0.6	chrX	74421702	74421873	(81619022)	+	(AGCCGG)n	Simple_repeat	1	173	(0)	4465612
12821	15.4	1.2	1.2	chrX	77493880	77496190	(78544705)	+	L1PA8A	LINE/L1	2	2326	(4157)	4468388
6868	19.2	7.9	1.7	chrX	107324381	107325881	(48715014)	+	MER52A	LTR/ERV1	46	1755	(0)	4503988
12	7.8	7.4	0.0	chrX	107484450	107484476	(48556419)	+	(CTCC)n	Simple_repeat	1	29	(0)	4504257
12	30.9	0.0	2.0	chrX	107677040	107677089	(48363806)	+	GA-rich	Low_complexity	1	50	(0)	4504626
605	26.1	6.8	1.0	chrX	107712932	107713134	(48327761)	+	MIRb	SINE/MIR	24	248	(20)	4504703
230	32.3	0.0	4.4	chrX	107747616	107747683	(48293212)	C	L2a	LINE/L2	(1)	3425	3361	4504749
17	16.0	0.0	0.0	chrX	107775831	107775865	(48265030)	+	(CCCT)n	Simple_repeat	1	35	(0)	4504801
24244	6.6	0.8	0.2	chrX	110229539	110232609	(45808286)	+	L1PA6	LINE/L1	180	3254	(3065)	4508111
16	10.8	0.0	3.1	chrX	118496321	118496352	(37544543)	+	(CGGAGG)n	Simple_repeat	1	32	(0)	4519351
17	24.1	3.3	1.6	chrX	118727424	118727483	(37313412)	+	(GCC)n	Simple_repeat	1	62	(0)	4519783
353	29.5	4.9	2.5	chrX	119237791	119237950	(36802945)	C	MER5B	DNA/hAT-Charlie	(4)	174	11	4520707
582	31.2	12.6	4.4	chrX	119698736	119699171	(36341724)	C	L2c	LINE/L2	(1)	3386	2910	4521601
31	0.0	3.1	0.0	chrX	119758501	119758532	(36282363)	+	(CCT)n	Simple_repeat	1	33	(0)	4521757
17	27.1	0.0	3.3	chrX	120250794	120250854	(35790041)	+	(CGG)n	Simple_repeat	1	61	(0)	4522654
16	16.0	4.5	2.2	chrX	120311471	120311514	(35729381)	+	(CCCT)n	Simple_repeat	1	46	(0)	4522745
13	14.7	3.3	0.0	chrX	120560432	120560461	(35480434)	+	GA-rich	Low_complexity	1	31	(0)	4523164
16	15.5	0.0	0.0	chrX	120560484	120560513	(35480382)	+	(CTG)n	Simple_repeat	1	30	(0)	4523165
12	23.9	0.0	2.4	chrX	120561001	120561041	(35479854)	+	G-rich	Low_complexity	1	41	(0)	4523167
18	25.3	1.6	9.4	chrX	120561550	120561674	(35479221)	+	GA-rich	Low_complexity	1	127	(0)	4523170
2260	8.0	0.3	3.3	chrX	123785537	123785838	(32255057)	+	AluSp	SINE/Alu	2	294	(19)	4527331
227	24.4	15.5	1.2	chrX	129925694	129925776	(26115119)	+	L3	LINE/CR1	3675	3771	(328)	4535590
274	16.9	13.3	0.0	chrX	132093830	132093894	(23947001)	C	MIRb	SINE/MIR	(74)	194	120	4538887
619	25.7	4.8	5.5	chrX	134536896	134537150	(21503745)	C	MLT1K	LTR/ERVL-MaLR	(327)	268	16	4542909
17	29.3	2.4	2.4	chrX	134549324	134549405	(21491490)	+	(GAGC)n	Simple_repeat	1	84	(0)	4542925
71	27.0	4.4	4.9	chrX	134796358	134796747	(21244148)	+	GA-rich	Low_complexity	1	407	(0)	4543385
18	21.6	2.1	0.0	chrX	135022461	135022508	(21018387)	+	(GCGCT)n	Simple_repeat	1	49	(0)	4543827
287	35.2	3.6	3.0	chrX	135344337	135344500	(20696395)	+	MER5A	DNA/hAT-Charlie	25	189	(0)	4544203
30	26.9	0.9	3.6	chrX	135521835	135521944	(20518951)	+	(CTC)n	Simple_repeat	1	111	(0)	4544494
36	0.0	2.7	0.0	chrX	136767835	136767871	(19273024)	+	(GCA)n	Simple_repeat	1	38	(0)	4546544
213	23.0	14.4	8.9	chrX	136768687	136768810	(19272085)	C	Tigger19b	DNA/TcMar-Tigger	(236)	314	183	4546546
19	30.8	3.2	1.0	chrX	138711423	138711515	(17329380)	+	(GGCG)n	Simple_repeat	1	96	(0)	4549625
531	34.7	5.7	5.5	chrX	140356673	140357103	(15683792)	C	L2c	LINE/L2	(108)	3279	2856	4552079
279	26.0	8.3	0.0	chrX	140434909	140434985	(15605910)	C	MIRb	SINE/MIR	(7)	261	178	4552201
189	28.6	16.9	0.0	chrX	140435108	140435205	(15605690)	C	L2b	LINE/L2	(19)	3368	3251	4552202
65	9.3	1.6	1.6	chrX	147911979	147912111	(8128784)	+	(GGC)n	Simple_repeat	1	133	(0)	4562594
13	25.1	0.0	2.3	chrX	149505177	149505220	(6535675)	+	(GCCGCA)n	Simple_repeat	1	44	(0)	4564708
39	33.6	1.3	4.2	chrX	149540045	149540280	(6500615)	+	(GCCCC)n	Simple_repeat	1	239	(0)	4564764
15	19.4	0.0	4.4	chrX	149540682	149540726	(6500169)	+	(CCCTTC)n	Simple_repeat	1	45	(0)	4564765
2951	11.6	9.0	3.0	chrX	149719916	149720386	(6320509)	+	LTR22C0	LTR/ERVK	1	502	(0)	4564966
48035	6.5	0.2	0.2	chrX	149720387	149727208	(6313687)	+	HERVK22-int	LTR/ERVK	1	6837	(0)	4564966
131	16.5	2.9	2.2	chrX	150403828	150404093	(5636802)	+	GA-rich	Low_complexity	1	267	(0)	4565850
12	18.4	5.4	0.0	chrX	153335392	153335428	(2705467)	+	(CCTCAC)n	Simple_repeat	1	39	(0)	4570129
19	8.5	2.4	4.8	chrX	153766465	153766505	(2274390)	+	(CCTC)n	Simple_repeat	1	42	(0)	4570724
277	18.5	0.0	0.0	chrX	154048795	154048848	(1992047)	C	L2a	LINE/L2	(1007)	2412	2359	4571147
194	28.0	2.6	0.0	chrX	154048911	154048985	(1991910)	C	L2a	LINE/L2	(1198)	2221	2145	4571147
350	28.4	9.0	8.5	chrX	154083486	154083662	(1957233)	+	Charlie10b	DNA/hAT-Charlie	10	187	(55)	4571226
12	15.3	5.3	2.5	chrX	154370549	154370586	(1670309)	+	(CTGCCCA)n	Simple_repeat	1	40	(0)	4571754
13	13.2	0.0	0.0	chrX	154370687	154370711	(1670184)	+	(CCAG)n	Simple_repeat	1	25	(0)	4571755
939	28.8	4.3	0.6	chrX	155057048	155057379	(983516)	C	HERVL40-int	LTR/ERVL	(2356)	3174	2830	4572832