741	27.4	2.8	2.1	chr1	3978735	3979014	(244977408)	C	L2a	LINE/L2	(2816)	603	322	4656
1221	21.2	6.7	0.6	chr1	4451401	4451722	(244504700)	C	MER89	LTR/ERV1	(9)	550	208	5350
1729	28.1	8.6	3.3	chr1	4953003	4953943	(244002479)	+	L1MEd	LINE/L1	738	1733	(5370)	6033
2199	22.3	2.2	7.5	chr1	5370656	5371241	(243585181)	+	MLT2B3	LTR/ERVL	1	554	(0)	6653
1930	19.7	8.8	2.3	chr1	5371242	5371463	(243584959)	+	MER89	LTR/ERV1	314	559	(0)	6652
212	31.8	13.6	0.8	chr1	9169764	9170057	(239786365)	+	L2c	LINE/L2	3017	3365	(10)	13080
1917	11.7	8.2	0.0	chr1	10217334	10217615	(238738807)	C	AluSx1	SINE/Alu	(4)	308	2	15355
1124	26.1	5.0	6.5	chr1	10217616	10217989	(238738433)	+	L2a	LINE/L2	3044	3421	(5)	15354
2261	10.5	1.0	0.0	chr1	16728032	16728327	(232228095)	+	AluSz	SINE/Alu	1	299	(13)	28016
4846	11.0	3.9	3.2	chr1	23223386	23224529	(225731893)	C	MER11A	LTR/ERVK	(0)	1266	1	41921
236	16.8	5.9	15.9	chr1	25390341	25390453	(223565969)	C	L1MEd	LINE/L1	(6258)	828	728	47040
194	28.2	0.0	0.0	chr1	25390463	25390501	(223565921)	C	MIRb	SINE/MIR	(183)	85	47	47039
2349	8.6	0.0	0.7	chr1	27082127	27082427	(221873995)	C	AluSc5	SINE/Alu	(8)	301	3	50884
2721	21.2	8.9	4.5	chr1	27082428	27082598	(221873824)	C	L1ME3B	LINE/L1	(837)	5309	5116	50880
2264	10.6	0.0	0.0	chr1	27082644	27082936	(221873486)	C	AluSg4	SINE/Alu	(17)	293	1	50885
493	25.8	0.0	2.4	chr1	27573216	27573342	(221383080)	C	MIR3	SINE/MIR	(4)	204	81	52046
2080	11.4	3.1	0.0	chr1	30673200	30673480	(218282942)	+	AluSc5	SINE/Alu	1	290	(19)	58827
1997	26.4	7.6	5.8	chr1	30673572	30674738	(218281684)	+	L1ME4b	LINE/L1	761	1971	(4271)	58826
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
514	25.8	1.1	7.5	chr1	31604196	31604401	(217352021)	C	L1MEd	LINE/L1	(6181)	922	722	60990
1068	31.2	5.1	3.7	chr1	31604393	31604903	(217351519)	C	L1M5	LINE/L1	(1160)	4986	4466	60998
2305	9.9	0.0	0.3	chr1	32023970	32024263	(216932159)	+	AluSx1	SINE/Alu	1	293	(19)	61896
3900	13.1	7.5	2.2	chr1	32458578	32459477	(216496945)	+	MER11A	LTR/ERVK	152	1266	(0)	62888
783	27.5	4.0	6.6	chr1	34582054	34582388	(214374034)	+	L1MEd	LINE/L1	585	910	(6176)	67023
594	31.9	9.0	0.4	chr1	34582390	34582769	(214373653)	C	L2a	LINE/L2	(222)	3204	2796	67022
249	33.6	6.2	0.0	chr1	36582689	36582810	(212373612)	+	L3b	LINE/CR1	4947	5076	(156)	71181
318	31.4	7.9	2.3	chr1	36582870	36583110	(212373312)	C	L1ME3G	LINE/L1	(0)	924	729	71182
361	30.2	3.2	0.8	chr1	40802826	40802945	(208153477)	C	MIRc	SINE/MIR	(106)	162	40	79536
751	28.7	13.3	5.9	chr1	41313387	41313570	(207642852)	C	HAL1ME	LINE/L1	(1762)	703	492	80556
1509	22.8	7.6	11.1	chr1	41313571	41314074	(207642348)	C	MLT1H2	LTR/ERVL-MaLR	(4)	485	1	80557
671	22.0	1.2	0.6	chr1	50406064	50406223	(198550199)	C	Zaphod3	DNA/hAT-Tip100	(1389)	1234	1074	96715
1880	20.7	2.4	1.0	chr1	50406204	50406613	(198549809)	C	Zaphod3	DNA/hAT-Tip100	(1950)	673	258	96715
17	8.3	3.9	0.0	chr1	50959622	50959647	(197996775)	+	(CA)n	Simple_repeat	1	27	(0)	97703
21	9.2	0.0	2.7	chr1	50959881	50959917	(197996505)	+	(CCG)n	Simple_repeat	1	37	(0)	97704
369	26.3	9.3	0.4	chr1	53131492	53131681	(195824741)	+	L2c	LINE/L2	3190	3375	(0)	102498
1401	30.7	13.9	1.4	chr1	53131680	53132563	(195823859)	C	L2a	LINE/L2	(0)	3426	2441	102499
218	29.4	9.2	6.3	chr1	53325741	53325867	(195630555)	+	L2c	LINE/L2	3255	3385	(2)	102872
15	13.2	3.0	0.0	chr1	53326264	53326308	(195630114)	+	G-rich	Low_complexity	1	46	(0)	102873
207	27.1	1.7	1.6	chr1	55605592	55605652	(193350770)	+	L2b	LINE/L2	3021	3080	(307)	107404
235	37.0	1.0	3.9	chr1	55605946	55606049	(193350373)	C	L2c	LINE/L2	(39)	3348	3248	107405
1456	27.8	9.6	4.3	chr1	56748788	56749725	(192206697)	C	L1MEd	LINE/L1	(5402)	1701	709	109426
14	19.4	2.3	2.3	chr1	58546475	58546517	(190409905)	+	(TCCCC)n	Simple_repeat	1	44	(0)	113060
27614	2.4	0.1	0.0	chr1	60640013	60646037	(188310385)	+	L1PA2	LINE/L1	125	6155	(0)	116878
27	19.4	3.1	0.0	chr1	61077349	61077413	(187879009)	+	(AGCG)n	Simple_repeat	1	67	(0)	117645
512	36.5	9.0	6.2	chr1	62823161	62824008	(186132414)	+	L2c	LINE/L2	2358	3262	(125)	120882
19445	10.6	3.4	1.4	chr1	63383583	63385184	(185571238)	C	L1MA3	LINE/L1	(47)	7677	5853	121986
574	36.5	7.8	0.5	chr1	66365870	66366238	(182590184)	+	L3b	LINE/CR1	4673	5070	(162)	127111
3302	19.2	3.8	1.9	chr1	66852937	66853562	(182102860)	C	MER73	LTR/ERVL	(0)	644	7	127867
389	23.3	7.7	0.8	chr1	68081570	68081701	(180874721)	C	MIR	SINE/MIR	(24)	184	33	130058
237	21.3	9.6	6.0	chr1	68081717	68081826	(180874596)	C	MIRc	SINE/MIR	(107)	123	11	130059
2122	7.2	2.3	3.0	chr1	68252890	68253191	(180703231)	C	L1PA7	LINE/L1	(0)	6154	5855	130320
412	31.5	9.3	6.7	chr1	68253192	68253609	(180702813)	+	L1MD	LINE/L1	4532	4961	(1185)	130321
251	30.8	3.7	4.3	chr1	70056852	70057014	(178899408)	C	L2-3_Crp	LINE/L2	(1179)	917	756	132805
2645	17.8	3.6	1.6	chr1	70440759	70440974	(178515448)	C	MER89	LTR/ERV1	(0)	559	338	133438
1925	17.1	8.9	5.8	chr1	70440975	70441409	(178515013)	C	LTR47A	LTR/ERVL	(0)	452	3	133439
1584	32.5	6.5	7.0	chr1	77429870	77430868	(171525554)	C	L2a	LINE/L2	(440)	2979	1986	142869
15612	14.4	5.0	2.5	chr1	77607937	77613060	(171343362)	+	L1MA9	LINE/L1	2430	7693	(38)	143172
1670	31.2	6.3	7.3	chr1	79382857	79384161	(169572261)	C	L1MEd	LINE/L1	(5777)	1309	18	145814
2231	26.7	9.5	2.9	chr1	85620757	85621664	(163334758)	+	L1MEd	LINE/L1	158	1118	(5968)	154473
834	19.6	0.0	2.0	chr1	85671319	85671466	(163284956)	+	AluJo	SINE/Alu	148	292	(20)	154545
2146	13.0	0.3	0.3	chr1	88701949	88702256	(160254166)	C	AluSx	SINE/Alu	(2)	310	3	158844
383	28.5	13.1	0.0	chr1	90050734	90050912	(158905510)	+	Tigger13a	DNA/TcMar-Tigger	88	293	(478)	160772
224	26.6	15.3	0.0	chr1	90051044	90051137	(158905285)	C	MamTip2	DNA/hAT-Tip100	(89)	216	106	160773
793	24.2	15.5	2.5	chr1	90785090	90785403	(158171019)	+	L2a	LINE/L2	3065	3426	(0)	161777
1838	17.2	0.0	3.8	chr1	92609874	92610186	(156346236)	C	AluJo	SINE/Alu	(11)	301	1	164776
857	26.8	17.4	8.0	chr1	92610315	92610851	(156345571)	+	L1MEd	LINE/L1	620	1225	(5861)	164777
2389	10.0	0.3	0.0	chr1	92914488	92914787	(156041635)	+	AluSx1	SINE/Alu	1	301	(11)	165345
2265	19.5	4.4	8.8	chr1	92950978	92951633	(156004789)	+	MLT1E2	LTR/ERVL-MaLR	1	626	(1)	165408
7198	6.7	13.9	3.1	chr1	93479027	93480151	(155476271)	C	MER11A	LTR/ERVK	(0)	1266	1	166380
6187	12.3	14.0	1.5	chr1	93833029	93834103	(155122319)	C	MER11B	LTR/ERVK	(4)	1232	1	166907
488	5.5	0.0	14.1	chr1	93847573	93847657	(155108765)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	166925
29	0.0	0.0	0.0	chr1	93847897	93847923	(155108499)	+	(GCG)n	Simple_repeat	1	27	(0)	166926
305	28.0	3.3	2.5	chr1	93848110	93848230	(155108192)	C	MER5A	DNA/hAT-Charlie	(16)	173	52	166927
95	1.0	2.0	1.0	chr1	101258580	101258678	(147697744)	+	(TCTT)n	Simple_repeat	1	101	(0)	177765
11	9.1	2.3	11.1	chr1	101259318	101259361	(147697061)	+	(ACACAT)n	Simple_repeat	1	45	(0)	177766
5409	13.6	14.5	2.0	chr1	102497384	102498462	(146457960)	+	MER11B	LTR/ERVK	1	1236	(0)	179383
4128	9.8	2.9	7.5	chr1	105351145	105352231	(143604191)	+	MER11A	LTR/ERVK	1	1266	(0)	182751
464	34.3	4.4	0.0	chr1	109157419	109157590	(139798832)	C	MER91A	DNA/hAT-Tip100	(14)	182	3	188133
235	27.5	2.8	0.0	chr1	109157596	109157664	(139798758)	C	MIR	SINE/MIR	(91)	171	101	188134
4754	8.6	1.8	1.9	chr1	109708621	109709643	(139246779)	+	MER11A	LTR/ERVK	1	1266	(0)	188981
20240	15.9	2.9	0.6	chr1	110902717	110906134	(138050288)	+	L1M1	LINE/L1	16	3514	(4051)	190883
10331	13.0	4.7	1.1	chr1	111099615	111102942	(137853480)	C	L1PBa1	LINE/L1	(3113)	3749	255	191101
1224	31.6	7.8	4.2	chr1	111806577	111807216	(137149206)	+	L1MEg	LINE/L1	2	682	(5402)	192107
2139	16.2	0.3	2.5	chr1	111807217	111807395	(137149027)	+	Tigger3a	DNA/TcMar-Tigger	2	180	(168)	192108
486	9.0	0.0	1.5	chr1	112991613	112991679	(135964743)	+	AluSz6	SINE/Alu	244	309	(3)	194219
2392	9.3	0.0	0.3	chr1	112992096	112992395	(135964027)	+	AluSx1	SINE/Alu	1	299	(13)	194220
255	30.7	13.3	0.7	chr1	113369965	113370115	(135586307)	+	L2	LINE/L2	2226	2398	(1021)	194932
1446	29.4	6.5	1.5	chr1	113370131	113370610	(135585812)	C	LTR33	LTR/ERVL	(0)	515	10	194933
191	29.0	3.9	5.3	chr1	113370625	113370755	(135585667)	+	L2	LINE/L2	2411	2539	(880)	194932
19523	13.1	6.1	3.8	chr1	113626217	113631419	(135325003)	C	L1MA3	LINE/L1	(2254)	5311	4	195291
260	23.9	12.7	4.1	chr1	116625576	116625697	(132330725)	C	L2	LINE/L2	(596)	2823	2690	199998
1134	29.7	6.7	5.1	chr1	117730611	117731587	(131224835)	+	L1M5	LINE/L1	3341	4334	(1812)	201725
231	31.0	0.0	0.0	chr1	117731633	117731719	(131224703)	+	L1ME5	LINE/L1	6094	6180	(14)	201732
705	30.7	9.2	3.6	chr1	117731744	117732186	(131224236)	C	L2	LINE/L2	(1543)	1876	1407	201733
215	25.0	0.0	7.7	chr1	119920564	119920641	(129035781)	+	L2b	LINE/L2	2913	2984	(403)	204739
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
24	15.6	1.1	0.0	chr1	148522481	148522534	(100433888)	+	G-rich	Low_complexity	1	54	(0)	215837
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
53	0.0	0.0	0.0	chr1	150807081	150807125	(98149297)	+	(CA)n	Simple_repeat	1	45	(0)	219872
479	28.1	6.2	3.3	chr1	151099678	151099904	(97856518)	+	MIR	SINE/MIR	2	227	(41)	220502
17	14.3	4.9	6.2	chr1	153963672	153963732	(94992690)	+	(GAGCGG)n	Simple_repeat	1	64	(0)	225138
530	26.1	9.6	6.0	chr1	156097419	156097618	(92858804)	C	MIRb	SINE/MIR	(19)	249	42	229473
15	5.6	0.0	0.0	chr1	156959925	156959943	(91996479)	+	(C)n	Simple_repeat	1	19	(0)	231034
248	29.2	3.0	3.0	chr1	160745413	160745511	(88210911)	+	MIR	SINE/MIR	10	108	(154)	236195
222	30.9	12.5	5.3	chr1	160745536	160745561	(88210861)	+	MIRb	SINE/MIR	119	140	(128)	236196
1135	22.9	0.5	0.0	chr1	160745562	160745784	(88210638)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	236197
24	22.7	2.2	5.4	chr1	162168650	162168739	(86787683)	+	(TCTT)n	Simple_repeat	1	92	(0)	238694
187	21.1	3.4	9.5	chr1	162350080	162350142	(86606280)	C	UCON71_Crp	Unknown	(73)	204	146	238993
678	21.4	6.7	1.6	chr1	162350653	162350837	(86605585)	C	L1MA9	LINE/L1	(147)	6165	5971	238994
5608	15.4	2.1	3.2	chr1	163041217	163043224	(85913198)	C	L1MA10	LINE/L1	(2)	6332	4334	240157
1975	20.4	0.5	0.3	chr1	165026190	165026573	(83929849)	C	MER89	LTR/ERV1	(0)	559	175	242991
474	34.3	9.9	0.3	chr1	165181418	165181701	(83774721)	+	L1MEd	LINE/L1	512	825	(6261)	243228
450	31.5	0.6	0.6	chr1	170530081	170530243	(78426179)	+	L1MEd	LINE/L1	613	775	(6311)	251431
1469	16.8	2.2	8.9	chr1	170994773	170994923	(77961499)	+	Ricksha_c	DNA/MULE-MuDR	1895	2048	(0)	252063
660	15.4	14.4	0.7	chr1	174829908	174830051	(74126371)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	323	257754
2353	10.7	0.0	0.0	chr1	174830476	174830774	(74125648)	C	AluSx	SINE/Alu	(11)	301	3	257755
3688	11.4	7.4	2.8	chr1	178207899	178208963	(70747459)	+	MER11A	LTR/ERVK	1	1236	(0)	262752
4548	7.1	2.8	1.5	chr1	182045245	182046257	(66910165)	C	MER11A	LTR/ERVK	(0)	1266	1	268763
18	23.7	0.0	6.8	chr1	183472319	183472363	(65484059)	+	(CCCTCT)n	Simple_repeat	1	70	(0)	271188
17	18.8	0.0	0.0	chr1	183472364	183472394	(65484028)	+	(C)n	Simple_repeat	1	31	(0)	271189
305	32.5	0.8	2.4	chr1	184871805	184871930	(64084492)	+	L1ME3D	LINE/L1	426	549	(6554)	273368
2698	26.0	7.0	6.4	chr1	184871947	184872423	(64083999)	+	L1ME3D	LINE/L1	603	1113	(5990)	273368
736	16.8	4.3	0.0	chr1	185290441	185290595	(63665827)	+	L1MA8	LINE/L1	6124	6285	(6)	274029
2502	4.4	4.6	0.0	chr1	185664663	185664955	(63291467)	+	AluY	SINE/Alu	1	307	(4)	274599
87	4.4	0.0	0.0	chr1	185665076	185665170	(63291252)	+	(CTTC)n	Simple_repeat	1	95	(0)	274600
2541	28.0	14.3	2.5	chr1	185750269	185751897	(63204525)	C	L1MEd	LINE/L1	(3437)	2709	878	274731
382	32.6	7.2	4.2	chr1	185751898	185752086	(63204336)	C	L1MEd	LINE/L1	(6291)	812	618	274731
1153	29.6	7.4	3.0	chr1	187081150	187081658	(61874764)	C	L2a	LINE/L2	(4)	3422	2889	276527
49	14.9	5.9	1.6	chr1	187081781	187081899	(61874523)	+	(CCTT)n	Simple_repeat	1	126	(0)	276528
479	29.7	0.0	0.0	chr1	193474153	193474270	(55482152)	C	ERV3-16A3_I-int	LTR/ERVL	(4376)	850	733	284916
443	33.0	6.6	0.5	chr1	193474375	193474587	(55481835)	+	LTR16	LTR/ERVL	208	434	(4)	284917
552	26.0	16.0	1.0	chr1	193474596	193474797	(55481625)	+	L2	LINE/L2	2089	2326	(1093)	284918
1798	18.9	2.0	6.4	chr1	196535611	196535984	(52420438)	C	LTR18A	LTR/ERVL	(0)	357	1	288783
509	21.6	0.0	0.0	chr1	196535986	196536087	(52420335)	C	HERVL18-int	LTR/ERVL	(0)	6047	5946	288783
285	24.1	1.7	0.0	chr1	196536088	196536145	(52420277)	C	HERVL18-int	LTR/ERVL	(780)	5267	5209	288783
15688	14.1	2.9	1.5	chr1	197204969	197209313	(51747109)	C	L1PB1	LINE/L1	(1705)	5157	708	289616
35	2.8	0.0	0.0	chr1	197250518	197250554	(51705868)	+	(TTACA)n	Simple_repeat	1	37	(0)	289663
626	26.3	6.5	4.9	chr1	199626982	199627225	(49329197)	C	LTR48	LTR/ERV1	(11)	633	386	292781
1014	20.6	14.9	3.3	chr1	199627242	199627542	(49328880)	C	LTR48	LTR/ERV1	(445)	342	1	292781
627	33.8	9.1	6.2	chr1	202597166	202597898	(46358524)	C	L2c	LINE/L2	(18)	3357	2595	298153
360	28.2	11.6	2.4	chr1	202597910	202598163	(46358259)	+	L2c	LINE/L2	3067	3385	(2)	298154
753	20.4	10.4	12.7	chr1	203905937	203906086	(45050336)	C	MLT1B	LTR/ERVL-MaLR	(211)	179	22	300566
273	19.4	1.5	1.5	chr1	203906220	203906287	(45050135)	+	SVA_B	Retroposon/SVA	125	192	(1191)	300568
490	9.8	0.0	0.0	chr1	203906228	203906288	(45050134)	C	AluJo	SINE/Alu	(251)	61	1	300569
274	35.3	5.3	10.5	chr1	203906291	203906746	(45049676)	C	L1MEd	LINE/L1	(6337)	749	319	300570
427	27.4	9.5	7.3	chr1	204934944	204935230	(44021192)	C	L2c	LINE/L2	(35)	3352	3059	302541
1602	20.8	7.4	0.0	chr1	204935263	204935598	(44020824)	C	MER89	LTR/ERV1	(0)	559	197	302542
280	23.2	3.5	0.0	chr1	204935572	204935653	(44020769)	C	MER89	LTR/ERV1	(470)	89	5	302542
581	22.6	5.6	1.2	chr1	205907772	205907941	(43048481)	C	L1M4b	LINE/L1	(6673)	194	17	304250
332	13.8	0.0	1.7	chr1	205907939	205907997	(43048425)	+	L1M2c	LINE/L1	502	559	(6230)	304251
1380	15.9	4.5	0.8	chr1	205908032	205908291	(43048131)	C	MLT1A0	LTR/ERVL-MaLR	(84)	281	12	304252
1913	15.1	0.7	2.0	chr1	212942511	212942814	(36013608)	C	AluJr	SINE/Alu	(12)	300	1	315479
1100	29.5	6.0	4.4	chr1	212942821	212943228	(36013194)	C	L1MEd	LINE/L1	(6286)	817	403	315475
1829	16.6	2.6	8.9	chr1	220685683	220685974	(28270448)	+	MLT1B	LTR/ERVL-MaLR	111	390	(0)	326582
922	27.0	9.5	12.5	chr1	220685975	220686218	(28270204)	+	LTR67B	LTR/ERVL	316	559	(61)	326581
1491	16.3	12.6	4.2	chr1	220686264	220686596	(28269826)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	326584
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
582	27.7	0.0	2.4	chr1	227369104	227369273	(21587149)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	337393
20	7.8	0.0	0.0	chr1	228528635	228528661	(20427761)	+	(A)n	Simple_repeat	1	27	(0)	338861
717	17.9	0.2	1.0	chr1	228529192	228531637	(20424785)	+	HSAT4	Satellite/centr	1	2427	(5)	338862
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
1884	27.9	5.9	5.7	chr1	229192799	229193612	(19762810)	+	Charlie7	DNA/hAT-Charlie	346	1161	(1451)	339821
1395	29.9	7.5	2.0	chr1	229845053	229845850	(19110572)	C	L1MEd	LINE/L1	(5783)	1320	476	341001
16	18.6	6.1	0.0	chr1	230426471	230426519	(18529903)	+	G-rich	Low_complexity	1	52	(0)	341849
9847	19.0	5.2	0.8	chr1	230810497	230813638	(18142784)	C	L1MB4	LINE/L1	(2)	6351	3068	342451
3405	18.4	7.6	5.8	chr1	230813620	230814251	(18142171)	C	L1MB4	LINE/L1	(4745)	1655	1016	342451
12	11.6	3.3	3.2	chr1	231810371	231810400	(17146022)	+	(CTTT)n	Simple_repeat	1	31	(0)	344101
3061	16.8	2.2	1.1	chr1	231810486	231811033	(17145389)	C	MER89	LTR/ERV1	(0)	559	6	344102
11349	10.1	1.1	0.8	chr1	232611288	232612862	(16343560)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	345159
2454	13.8	1.0	0.0	chr1	233347508	233347899	(15608523)	+	L1PA16	LINE/L1	5767	6162	(4)	346248
2628	23.4	2.0	2.1	chr1	233347971	233348715	(15607707)	C	L1MB8	LINE/L1	(1)	6177	5434	346249
426	24.2	6.4	3.0	chr1	234476104	234476269	(14480153)	+	L1MCc	LINE/L1	1528	1699	(5429)	347925
1010	28.2	13.5	0.8	chr1	234476262	234476744	(14479678)	+	HAL1	LINE/L1	1636	2189	(318)	347922
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
1874	15.2	1.3	3.8	chr1	236219739	236220053	(12736369)	+	AluJr	SINE/Alu	1	307	(5)	351191
184	23.1	0.0	0.0	chr1	236390908	236390946	(12565476)	+	MIR	SINE/MIR	66	104	(158)	351528
1117	13.8	0.0	0.0	chr1	236390960	236391111	(12565311)	C	AluSc	SINE/Alu	(24)	285	134	351529
354	32.2	8.8	4.0	chr1	236391182	236391333	(12565089)	C	MLT1K	LTR/ERVL-MaLR	(387)	208	49	351530
2079	18.9	7.4	1.4	chr1	238485152	238485817	(10470605)	C	MER61-int	LTR/ERV1	(4440)	777	1	354769
2284	16.4	1.9	2.5	chr1	239112587	239113052	(9843370)	C	MER89	LTR/ERV1	(0)	559	1	355628
1738	21.1	0.0	1.0	chr1	240005762	240006060	(8950362)	+	AluJb	SINE/Alu	1	296	(16)	356981
864	24.5	7.9	1.3	chr1	240006096	240006401	(8950021)	+	MLT1J2	LTR/ERVL-MaLR	2	329	(119)	356982
441	22.1	1.9	0.0	chr1	240844070	240844173	(8112249)	C	L1MC4	LINE/L1	(7)	8035	7930	358350
1844	18.1	0.0	1.0	chr1	243244461	243244774	(5711648)	+	AluJb	SINE/Alu	1	311	(1)	362282
884	25.5	6.1	1.8	chr1	244557607	244557938	(4398484)	C	L1MEf	LINE/L1	(4907)	1753	1407	364354
898	21.1	0.0	0.0	chr1	244557962	244558113	(4398309)	C	AluJr	SINE/Alu	(23)	289	138	364355
1769	7.5	0.0	3.8	chr1	244558139	244558377	(4398045)	C	AluSq	SINE/Alu	(11)	302	73	364356
324	26.8	0.0	0.0	chr1	245225999	245226080	(3730342)	C	MIRb	SINE/MIR	(14)	254	173	365690
2354	7.9	0.3	1.0	chr1	245226459	245226762	(3729660)	C	AluSp	SINE/Alu	(11)	302	1	365691
625	32.7	8.4	4.5	chr1	245663393	245663815	(3292607)	C	L1MEd	LINE/L1	(6228)	875	435	366371
1705	26.6	12.4	6.0	chr1	245769015	245769774	(3186648)	+	L1MC5a	LINE/L1	1779	2467	(310)	366502
291	33.1	9.5	7.4	chr10	4054883	4055326	(129742096)	+	L1MEd	LINE/L1	363	816	(6287)	375975
2081	6.1	0.0	0.0	chr10	7311977	7312238	(126485184)	+	L1PA5	LINE/L1	5892	6153	(1)	380817
1846	15.0	2.4	1.8	chr10	7885943	7886228	(125911194)	C	AluJb	SINE/Alu	(24)	288	1	381787
12	13.1	2.7	5.3	chr10	8161841	8161877	(125635545)	+	GA-rich	Low_complexity	1	38	(0)	382248
16	17.3	2.6	0.0	chr10	8533577	8533615	(125263807)	+	A-rich	Low_complexity	1	40	(0)	382936
1111	22.3	2.9	2.1	chr10	9393307	9393585	(124403837)	+	MER89	LTR/ERV1	279	559	(0)	384213
2253	11.7	0.7	0.3	chr10	9393627	9393935	(124403487)	+	AluSq2	SINE/Alu	1	310	(3)	384214
239	28.4	14.4	4.9	chr10	10834540	10834702	(122962720)	C	MIRb	SINE/MIR	(79)	189	9	386170
2183	9.7	1.1	0.0	chr10	12038101	12038378	(121759044)	+	AluSx1	SINE/Alu	1	281	(31)	388005
631	35.6	6.0	4.2	chr10	14829923	14830303	(118967119)	C	L1MEd	LINE/L1	(6311)	775	387	393144
491	36.5	6.7	6.0	chr10	14830326	14830563	(118966859)	C	L1MEd	LINE/L1	(6238)	848	604	393146
2494	9.0	0.0	0.0	chr10	14830564	14830874	(118966548)	+	AluSq2	SINE/Alu	1	311	(2)	393147
4511	10.0	2.7	2.3	chr10	16222566	16223580	(117573842)	C	MER11A	LTR/ERVK	(1)	1265	1	395413
1519	12.4	0.0	0.0	chr10	17779514	17779706	(116017716)	C	AluSz	SINE/Alu	(115)	197	5	398013
476	31.8	0.7	0.0	chr10	19169150	19169297	(114628125)	+	MER46C	DNA/TcMar-Tigger	190	338	(0)	400205
684	33.6	5.2	4.7	chr10	21449331	21449776	(112347646)	+	L1MEd	LINE/L1	319	783	(6303)	403728
2441	8.1	0.3	0.0	chr10	21449777	21450074	(112347348)	+	AluSp	SINE/Alu	2	300	(13)	403729
2252	25.4	10.0	4.1	chr10	21570375	21571654	(112225768)	C	L1MEc	LINE/L1	(4993)	1407	44	403960
484	34.2	8.4	5.4	chr10	22356696	22357380	(111440042)	+	L2c	LINE/L2	2626	3332	(55)	405148
1053	31.0	6.4	0.0	chr10	23819119	23819528	(109977894)	+	MLT1J	LTR/ERVL-MaLR	1	438	(74)	407497
26	10.1	1.6	6.5	chr10	31319141	31319201	(102478221)	+	G-rich	Low_complexity	1	62	(0)	420164
18	17.8	2.2	2.1	chr10	31319443	31319488	(102477934)	+	(CCG)n	Simple_repeat	1	47	(0)	420165
16	26.5	1.6	3.2	chr10	31319540	31319601	(102477821)	+	(CCG)n	Simple_repeat	1	63	(0)	420165
2305	13.1	0.0	0.0	chr10	32254741	32255053	(101542369)	C	AluSq10	SINE/Alu	(0)	313	1	421666
255	19.2	3.7	16.1	chr10	32255054	32255080	(101542342)	C	MER5A1	DNA/hAT-Charlie	(90)	76	50	421665
940	25.4	2.3	1.7	chr10	32255115	32255410	(101542012)	C	L1MC4a	LINE/L1	(2)	7880	7583	421667
346	22.2	16.1	0.0	chr10	34296840	34296938	(99500484)	+	FLAM_A	SINE/Alu	5	122	(20)	424528
13	17.4	0.0	2.9	chr10	34296939	34296972	(99500450)	+	(CCAA)n	Simple_repeat	1	34	(0)	424529
1665	17.0	6.2	0.0	chr10	34297041	34297310	(99500112)	+	AluJo	SINE/Alu	3	290	(22)	424530
5540	21.1	9.0	4.0	chr10	35438612	35440349	(98357073)	C	L1MDa	LINE/L1	(4409)	2224	146	426592
2892	16.4	5.4	0.4	chr10	38251710	38252240	(95545182)	C	MER89	LTR/ERV1	(0)	559	1	430736
761	26.9	23.0	2.3	chr10	42818425	42819278	(90978144)	C	L2	LINE/L2	(709)	2710	1609	432597
1554	28.7	11.6	3.3	chr10	44025362	44027243	(89770179)	+	L1MEd	LINE/L1	291	2412	(3734)	434403
302	25.0	8.9	0.0	chr10	48736192	48736283	(85061139)	C	MLT1J1	LTR/ERVL-MaLR	(0)	444	344	440959
456	25.5	6.4	3.0	chr10	48736320	48736485	(85060937)	C	MLT1J1	LTR/ERVL-MaLR	(205)	239	68	440959
3701	20.5	5.6	2.3	chr10	49589880	49591237	(84206185)	C	L1M4c	LINE/L1	(2739)	3643	2197	442063
366	40.0	5.2	3.2	chr10	50362172	50362455	(83434967)	+	L1MEd	LINE/L1	55	344	(6742)	443236
372	31.5	12.3	2.5	chr10	50362475	50362715	(83434707)	+	L1MEd	LINE/L1	503	770	(6316)	443236
1344	28.9	6.9	10.7	chr10	50452678	50453412	(83344010)	+	L1ME4a	LINE/L1	282	971	(6132)	443374
26	0.0	0.0	0.0	chr10	50453413	50453437	(83343985)	+	(AAAAT)n	Simple_repeat	1	25	(0)	443375
1344	28.9	6.9	10.7	chr10	50453438	50453697	(83343725)	+	L1ME4a	LINE/L1	972	1236	(5867)	443374
2249	17.8	1.3	5.6	chr10	52400580	52400883	(81396539)	C	MER65C	LTR/ERV1	(159)	302	1	446229
421	37.0	8.6	7.3	chr10	52400884	52401074	(81396348)	+	L3	LINE/CR1	3891	4079	(20)	446227
40	0.0	0.0	0.0	chr10	52401085	52401118	(81396304)	+	(AC)n	Simple_repeat	1	34	(0)	446231
19	12.8	0.0	0.0	chr10	59709884	59709917	(74087505)	+	(AGG)n	Simple_repeat	1	34	(0)	455972
13	27.4	0.0	6.2	chr10	59709957	59710020	(74087402)	+	(CCCGG)n	Simple_repeat	1	64	(0)	455973
23	11.4	0.0	0.0	chr10	59906294	59906331	(73891091)	+	(CCG)n	Simple_repeat	1	38	(0)	456271
11650	15.3	3.7	3.5	chr10	59921581	59923756	(73873666)	+	L1M4c	LINE/L1	24	2202	(4182)	456299
4449	10.4	9.8	2.3	chr10	64240636	64241678	(69555744)	+	MER11A	LTR/ERVK	1	1232	(4)	463076
252	31.8	4.5	2.7	chr10	67076266	67076375	(66721047)	C	MIR3	SINE/MIR	(11)	197	86	467006
34	24.0	2.1	5.6	chr10	67884874	67885014	(65912408)	+	(CGGCGG)n	Simple_repeat	1	144	(0)	468131
20	24.9	1.8	0.0	chr10	67885083	67885139	(65912283)	+	(ACG)n	Simple_repeat	1	58	(0)	468132
19	14.2	0.0	0.0	chr10	67885479	67885509	(65911913)	+	(T)n	Simple_repeat	1	31	(0)	468133
1706	10.0	14.4	0.4	chr10	72268397	72268646	(61528776)	+	AluSc	SINE/Alu	1	291	(18)	476909
776	16.8	0.0	0.8	chr10	72268647	72268765	(61528657)	C	AluJr	SINE/Alu	(194)	118	1	476910
761	13.9	0.7	3.5	chr10	72268805	72268946	(61528476)	+	L1MB5	LINE/L1	6004	6141	(33)	476911
83	4.6	0.0	0.0	chr10	72268956	72269046	(61528376)	+	(CCTT)n	Simple_repeat	1	91	(0)	476912
230	6.9	0.0	0.0	chr10	72269047	72269075	(61528347)	+	Alu	SINE/Alu	160	188	(114)	476913
312	18.0	6.2	1.6	chr10	72269060	72269120	(61528302)	+	FLAM_A	SINE/Alu	69	132	(10)	476914
1573	25.9	7.1	4.3	chr10	75573111	75573639	(58223783)	C	L1MEd	LINE/L1	(5636)	1450	908	483309
230	16.7	2.0	0.0	chr10	75573733	75573780	(58223642)	C	L1MEd	LINE/L1	(6339)	747	699	483309
360	34.6	10.3	3.9	chr10	75573949	75574354	(58223068)	C	L1MEd	LINE/L1	(6596)	490	56	483309
1753	30.3	6.0	2.5	chr10	77571032	77571705	(56225717)	C	L1MEd	LINE/L1	(6119)	967	269	486175
696	31.8	9.0	5.6	chr10	83070158	83070673	(50726749)	C	L1MEd	LINE/L1	(5957)	1129	595	494911
1362	27.2	8.7	1.2	chr10	83770412	83770838	(50026584)	+	L1MDb	LINE/L1	96	557	(5852)	495839
2615	19.5	1.9	1.2	chr10	83770880	83771440	(50025982)	+	L1MDb	LINE/L1	653	1217	(5192)	495839
2971	6.5	3.6	12.8	chr10	85035744	85036113	(48761309)	+	MLT2A1	LTR/ERVL	1	386	(58)	497637
33	0.0	3.1	0.0	chr10	85036114	85036145	(48761277)	+	(AT)n	Simple_repeat	1	33	(0)	497638
2971	6.5	3.6	12.8	chr10	85036146	85036265	(48761157)	+	MLT2A1	LTR/ERVL	387	444	(0)	497637
1409	13.6	1.3	0.0	chr10	85036267	85036486	(48760936)	+	L1PA16	LINE/L1	5942	6164	(2)	497636
4392	15.3	2.1	2.0	chr10	85036487	85037232	(48760190)	+	MER49	LTR/ERV1	14	760	(163)	497639
2000	13.4	0.0	0.0	chr10	92115177	92115451	(41681971)	C	AluSg	SINE/Alu	(35)	275	1	508410
3311	12.0	3.1	0.3	chr10	93811181	93811968	(39985454)	+	L1MB1	LINE/L1	5014	5829	(339)	511842
374	17.4	3.2	2.1	chr10	97203034	97203127	(36594295)	+	L1MB2	LINE/L1	6074	6168	(3)	517452
1073	25.8	12.3	1.6	chr10	97203402	97203771	(36593651)	+	MLT1L	LTR/ERVL-MaLR	187	601	(9)	517453
1860	14.1	0.7	2.1	chr10	99657904	99658186	(34139236)	+	AluJo	SINE/Alu	1	279	(33)	521874
1353	19.5	4.9	10.7	chr10	99658187	99658314	(34139108)	+	MER89	LTR/ERV1	434	546	(13)	521873
395	32.5	10.5	1.4	chr10	99658335	99658652	(34138770)	C	L2b	LINE/L2	(0)	3426	3039	521875
857	29.2	6.2	0.9	chr10	99852294	99852780	(33944642)	C	L1ME3Cz	LINE/L1	(6267)	836	97	522208
5524	12.5	5.6	0.6	chr10	99946411	99947565	(33849857)	+	L1PA17	LINE/L1	4789	6014	(152)	522373
26	0.0	0.0	0.0	chr10	99947566	99947590	(33849832)	+	(GGAG)n	Simple_repeat	1	25	(0)	522374
5524	11.8	4.7	0.9	chr10	99947591	99947741	(33849681)	+	L1PA17	LINE/L1	6015	6162	(4)	522373
792	34.7	8.8	4.3	chr10	100374124	100374725	(33422697)	C	L2	LINE/L2	(531)	2888	2256	523228
1756	11.1	1.9	13.6	chr10	102557296	102557647	(31239775)	+	AluJb	SINE/Alu	1	310	(2)	527173
480	29.4	9.8	4.2	chr10	102557648	102557866	(31239556)	C	MLT1K	LTR/ERVL-MaLR	(68)	527	291	527172
2169	13.0	0.3	2.2	chr10	102557886	102558201	(31239221)	C	AluSx	SINE/Alu	(2)	310	1	527174
4064	26.6	10.4	2.4	chr10	104411208	104412193	(29385229)	C	L1MEd	LINE/L1	(6050)	1053	20	530666
15	8.9	0.0	0.0	chr10	110511484	110511507	(23285915)	+	(GTT)n	Simple_repeat	1	24	(0)	539659
808	33.5	8.3	3.9	chr10	110931810	110932611	(22864811)	C	L2c	LINE/L2	(5)	3382	2546	540384
375	29.4	6.8	10.7	chr10	110932594	110932874	(22864548)	+	L2c	LINE/L2	3088	3370	(5)	540385
296	23.1	8.2	7.1	chr10	111156940	111157023	(22640399)	C	MER5A	DNA/hAT-Charlie	(94)	95	11	540685
27	33.4	0.0	0.0	chr10	113160360	113160457	(20636965)	+	(TTTT)n	Simple_repeat	1	98	(0)	543843
15	19.3	2.3	2.3	chr10	114077710	114077752	(19719670)	+	GA-rich	Low_complexity	1	44	(0)	545355
1379	31.7	5.8	7.2	chr10	118749092	118750044	(15047378)	+	ERVL-E-int	LTR/ERVL	1260	2271	(3396)	552534
36	30.7	5.6	0.0	chr10	121330530	121330689	(12466733)	+	(TCTC)n	Simple_repeat	1	169	(0)	556985
36	5.3	0.0	0.0	chr10	121330690	121330729	(12466693)	+	(CA)n	Simple_repeat	1	40	(0)	556986
5624	8.1	8.8	4.0	chr10	124795637	124796282	(9001140)	C	L1MA1	LINE/L1	(239)	6063	5375	562480
2077	27.4	6.5	2.7	chr10	125885745	125886441	(7910981)	+	L2a	LINE/L2	2614	3340	(86)	564143
16	22.7	0.0	0.0	chr10	125896669	125896709	(7900713)	+	G-rich	Low_complexity	1	41	(0)	564165
2566	6.7	0.0	1.9	chr10	125904844	125905159	(7892263)	+	AluY	SINE/Alu	1	310	(1)	564181
693	8.8	21.1	4.0	chr10	125905170	125905294	(7892128)	+	FAM	SINE/Alu	20	171	(14)	564182
528	22.7	7.4	0.6	chr10	125905314	125905490	(7891932)	C	L1MEg	LINE/L1	(2550)	3596	3407	564180
231	23.5	6.9	1.2	chr10	125905712	125905793	(7891629)	C	L1M5	LINE/L1	(2474)	3672	3586	564183
518	11.8	0.0	0.0	chr10	125905796	125905863	(7891559)	+	FAM	SINE/Alu	20	87	(98)	564184
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
886	33.9	3.4	1.3	chr11	1701308	1701705	(133384917)	+	L1MEd	LINE/L1	359	765	(6338)	574953
347	15.2	8.1	3.7	chr11	1701783	1701864	(133384758)	C	L1MD2	LINE/L1	(5988)	559	474	574954
485	27.9	15.4	0.8	chr11	1701861	1702120	(133384502)	+	L1MEd	LINE/L1	1686	1990	(4252)	574953
5401	15.1	6.7	0.9	chr11	2640569	2642486	(132444136)	C	L1MA4A	LINE/L1	(0)	7006	4957	576011
18	7.5	0.0	0.0	chr11	8018401	8018428	(127068194)	+	(CCCCA)n	Simple_repeat	1	28	(0)	583389
1230	0.8	0.0	0.0	chr11	8304522	8304653	(126781969)	+	AluYb8	SINE/Alu	179	310	(8)	583805
403	35.6	2.4	2.4	chr11	8304659	8304822	(126781800)	+	L1MEd	LINE/L1	587	750	(6336)	583803
1180	26.6	11.0	3.6	chr11	8304823	8305430	(126781192)	+	L1MEd	LINE/L1	1118	1782	(5304)	583803
254	32.9	4.1	0.0	chr11	9131135	9131274	(125955348)	+	L2	LINE/L2	2564	2709	(710)	585057
232	36.2	1.6	0.0	chr11	9131310	9131436	(125955186)	+	L2	LINE/L2	2805	2933	(486)	585057
817	23.5	9.4	4.8	chr11	9131440	9131712	(125954910)	C	ERV3-16A3_I-int	LTR/ERVL	(2551)	2675	2389	585058
6864	7.9	17.7	0.5	chr11	9451739	9452785	(125633837)	C	MER11A	LTR/ERVK	(0)	1266	1	585830
469	30.0	9.9	0.8	chr11	10670093	10670331	(124416291)	C	L5	LINE/RTE-X	(35)	2230	1968	587897
1927	14.2	0.0	1.7	chr11	12129715	12130010	(122956612)	C	AluJr	SINE/Alu	(19)	293	3	590291
13	12.5	0.0	3.6	chr11	12130292	12130319	(122956303)	+	GA-rich	Low_complexity	1	28	(0)	590292
12	19.5	2.9	0.0	chr11	12130370	12130404	(122956218)	+	(GCAGAGG)n	Simple_repeat	1	36	(0)	590293
276	25.3	1.1	7.5	chr11	12130565	12130658	(122955964)	C	L2c	LINE/L2	(11)	3376	3289	590294
279	25.3	7.8	1.2	chr11	12376591	12376674	(122709948)	C	MLT1M	LTR/ERVL-MaLR	(495)	177	88	590685
13	30.3	4.0	1.3	chr11	16607821	16607894	(118478728)	+	(CAGG)n	Simple_repeat	1	77	(0)	597238
2013	13.4	0.0	2.9	chr11	17417745	17418057	(117668565)	C	AluJo	SINE/Alu	(8)	304	1	598707
665	24.8	11.5	3.0	chr11	17418058	17418247	(117668375)	C	MIR	SINE/MIR	(60)	202	4	598706
884	32.3	9.5	3.3	chr11	19641266	19642051	(115444571)	+	L2a	LINE/L2	2574	3426	(0)	602586
14	15.6	0.0	0.0	chr11	25935913	25935941	(109150681)	+	A-rich	Low_complexity	1	29	(0)	611721
1982	13.2	4.7	1.4	chr11	25936126	25936493	(109150129)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	611722
5622	12.0	17.7	0.8	chr11	27135407	27136456	(107950166)	+	MER11A	LTR/ERVK	1	1266	(0)	613459
138	14.3	0.0	0.0	chr11	29724626	29724851	(105361771)	+	(GAGAGA)n	Simple_repeat	1	226	(0)	617439
1011	16.9	6.7	2.5	chr11	29724852	29725077	(105361545)	C	THE1C	LTR/ERVL-MaLR	(182)	250	1	617440
201	29.8	1.7	0.0	chr11	35923162	35923218	(99163404)	+	L2b	LINE/L2	3302	3359	(16)	627561
334	32.3	11.5	2.3	chr11	43866897	43867289	(91219333)	C	L1MEd	LINE/L1	(6110)	976	543	639109
13	22.7	3.6	3.5	chr11	43867296	43867350	(91219272)	+	(TTGT)n	Simple_repeat	1	57	(0)	639110
1506	20.7	3.3	2.9	chr11	45825202	45825655	(89260967)	+	MER89	LTR/ERV1	2	555	(4)	642859
2383	11.2	0.0	0.6	chr11	45825658	45825971	(89260651)	C	AluSx	SINE/Alu	(0)	312	1	642860
12	9.7	0.0	0.0	chr11	57460556	57460577	(77626045)	+	(ACGG)n	Simple_repeat	1	22	(0)	653751
19	22.2	0.0	0.0	chr11	57460625	57460671	(77625951)	+	(CGCCC)n	Simple_repeat	1	47	(0)	653752
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
283	36.7	12.6	3.7	chr11	64032919	64033292	(71053330)	+	L2b	LINE/L2	2940	3351	(24)	664885
17	10.4	0.0	3.0	chr11	64760086	64760118	(70326504)	+	(AGGAG)n	Simple_repeat	1	33	(0)	666171
577	29.1	6.7	10.0	chr11	68963642	68964031	(66122591)	+	MLT1K	LTR/ERVL-MaLR	123	498	(97)	674309
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
439	32.6	3.7	1.6	chr11	71467277	71467460	(63619162)	+	L1MEd	LINE/L1	595	782	(6321)	678310
535	21.6	4.0	6.7	chr11	78472958	78473019	(56613603)	C	L1MEd	LINE/L1	(5137)	1949	1896	692089
1111	13.2	0.0	1.3	chr11	78473020	78473178	(56613444)	+	AluJo	SINE/Alu	137	293	(19)	692090
535	21.6	4.0	6.7	chr11	78473179	78473294	(56613328)	C	L1MEd	LINE/L1	(5191)	1895	1776	692089
993	31.3	4.5	7.1	chr11	78473325	78473846	(56612776)	C	L1MEd	LINE/L1	(6257)	829	322	692089
17	5.0	0.0	0.0	chr11	79297923	79297943	(55788679)	+	(T)n	Simple_repeat	1	21	(0)	693643
2460	9.6	10.3	1.5	chr11	86109132	86109521	(48977101)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	704939
42	2.4	0.0	0.0	chr11	86109743	86109785	(48976837)	+	(CCCTGC)n	Simple_repeat	1	43	(0)	704940
455	7.2	0.0	4.3	chr11	86109791	86109906	(48976716)	+	SVA_C	Retroposon/SVA	1	111	(1273)	704941
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18	7.6	0.0	0.0	chr11	94543836	94543863	(40542759)	+	(CTCC)n	Simple_repeat	1	28	(0)	717311
15	20.5	0.0	2.4	chr11	94544397	94544437	(40542185)	+	(CAGCGG)n	Simple_repeat	1	41	(0)	717312
4341	23.0	7.1	5.2	chr11	94611934	94613775	(40472847)	C	L1MA9	LINE/L1	(3359)	4203	2304	717413
20	16.6	4.2	0.0	chr11	96343173	96343220	(38743402)	+	GA-rich	Low_complexity	1	50	(0)	720005
12	25.8	1.9	3.6	chr11	96343386	96343439	(38743183)	+	(AGCTC)n	Simple_repeat	1	55	(0)	720006
353	35.1	14.2	3.6	chr11	99959034	99959530	(35127092)	+	L2	LINE/L2	1130	1687	(1732)	724469
743	32.0	12.8	6.0	chr11	101579179	101580103	(33506519)	C	L1MEd	LINE/L1	(6077)	1009	14	726576
12815	16.8	4.8	5.0	chr11	102354508	102356195	(32730427)	C	L1MA9	LINE/L1	(546)	7185	5473	727811
1263	27.4	2.2	0.6	chr11	106166703	106167054	(28919568)	C	LTR16B1	LTR/ERVL	(8)	472	115	733200
1134	23.2	2.6	0.3	chr11	106167069	106167367	(28919255)	+	LTR8B	LTR/ERV1	392	820	(0)	733201
3509	13.6	2.5	0.3	chr11	106167573	106168149	(28918473)	C	LTR49	LTR/ERV1	(2)	593	4	733202
732	29.3	2.9	2.9	chr11	112552156	112552394	(22534228)	+	MIRb	SINE/MIR	20	258	(10)	743300
18	18.5	4.1	0.0	chr11	119664663	119664711	(15421911)	+	G-rich	Low_complexity	1	51	(0)	755272
18	3.5	0.0	6.1	chr11	120409508	120409540	(14677082)	+	(TTTC)n	Simple_repeat	1	33	(0)	756504
791	28.6	1.7	2.9	chr11	123262700	123262865	(11823757)	+	MIRb	SINE/MIR	33	198	(70)	761198
1933	16.7	20.8	0.7	chr11	123262866	123263310	(11823312)	C	MER89	LTR/ERV1	(0)	559	2	761199
791	28.6	1.7	2.9	chr11	123263311	123263381	(11823241)	+	MIRb	SINE/MIR	199	267	(1)	761198
16688	16.9	1.4	3.7	chr11	124688917	124689504	(10397118)	+	L1MA4A	LINE/L1	5445	6030	(815)	763410
1888	13.4	9.6	0.3	chr11	124689505	124689787	(10396835)	+	AluJb	SINE/Alu	1	312	(0)	763417
16688	16.9	0.4	2.9	chr11	124689788	124690525	(10396097)	+	L1MA4A	LINE/L1	6031	6753	(252)	763410
1029	16.7	14.0	10.9	chr11	125525332	125525366	(9561256)	+	LTR48	LTR/ERV1	4	35	(752)	764682
2152	11.1	5.8	1.1	chr11	125525367	125525729	(9560893)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	764683
1029	16.7	14.0	10.9	chr11	125525730	125525874	(9560748)	+	LTR48	LTR/ERV1	36	202	(585)	764682
803	30.0	9.5	2.1	chr11	127717425	127717989	(7368633)	+	L1ME3E	LINE/L1	537	1147	(5956)	767929
329	25.7	6.5	10.6	chr11	127847984	127848096	(7238526)	C	MER5B	DNA/hAT-Charlie	(1)	188	81	768117
550	23.6	1.6	0.8	chr11	127848109	127848232	(7238390)	+	MER5A	DNA/hAT-Charlie	24	148	(41)	768118
258	19.4	3.1	4.6	chr11	127848227	127848291	(7238331)	C	MER5A	DNA/hAT-Charlie	(30)	159	96	768119
23	16.6	6.6	0.0	chr11	130434673	130434733	(4651889)	+	(CTCG)n	Simple_repeat	1	65	(0)	771915
1552	27.8	14.1	3.4	chr11	134697845	134698846	(387776)	C	L1ME1	LINE/L1	(56)	6123	4985	777547
1201	27.1	6.0	4.3	chr11	134699210	134699698	(386924)	+	ERV3-16A3_I-int	LTR/ERVL	3637	4134	(1092)	777549
248	8.8	0.0	0.0	chr11	134936068	134936101	(150521)	+	MER107	DNA/hAT-Charlie	1	34	(166)	777841
265	5.9	0.0	0.0	chr11	134936108	134936141	(150481)	+	MER107	DNA/hAT-Charlie	1	34	(166)	777841
265	5.9	0.0	0.0	chr11	134936148	134936181	(150441)	+	MER107	DNA/hAT-Charlie	1	34	(166)	777841
367	6.5	0.0	0.0	chr11	134936188	134936233	(150389)	+	MER107	DNA/hAT-Charlie	1	46	(154)	777841
205	32.5	6.4	4.9	chr12	570263	570385	(132704924)	+	L3b	LINE/CR1	5089	5213	(19)	778980
18	3.2	2.8	5.4	chr12	570670	570705	(132704604)	+	(GCCCTG)n	Simple_repeat	1	37	(0)	778981
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
327	34.1	1.5	0.8	chr12	2256139	2256271	(131019038)	+	MER5A	DNA/hAT-Charlie	51	184	(5)	781931
2149	12.1	0.7	0.0	chr12	17097227	17097508	(116177801)	C	AluSx	SINE/Alu	(24)	288	5	805103
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
3482	16.9	4.5	1.5	chr12	22143457	22144128	(111131181)	+	L1M1	LINE/L1	16	708	(6857)	811688
6118	10.1	3.0	5.2	chr12	22144130	22144221	(111131088)	+	L1M1	LINE/L1	2110	2191	(5374)	811688
2259	12.0	0.0	1.3	chr12	22144222	22144537	(111130772)	C	AluSx1	SINE/Alu	(0)	312	1	811689
1976	12.9	2.4	2.4	chr12	22915906	22916246	(110359063)	+	THE1D	LTR/ERVL-MaLR	1	341	(40)	812877
1717	26.2	14.4	2.6	chr12	25729921	25730605	(107544704)	+	L2a	LINE/L2	1193	1971	(1448)	816898
2795	24.8	5.6	2.3	chr12	26761807	26762820	(106512489)	+	L1M2	LINE/L1	2195	3388	(4178)	818425
271	25.1	15.8	3.6	chr12	29242793	29242919	(104032390)	+	MIRb	SINE/MIR	11	160	(108)	822111
2590	18.3	2.5	1.1	chr12	29242922	29243469	(104031840)	C	MER89	LTR/ERV1	(0)	559	4	822112
344	24.9	2.8	3.8	chr12	29719039	29719170	(103556139)	+	Kanga1c	DNA/TcMar-Tc2	642	729	(0)	822762
375	34.0	9.9	3.1	chr12	29719174	29719559	(103555750)	C	L1MEd	LINE/L1	(6268)	818	404	822763
262	33.6	5.6	4.0	chr12	29741484	29741607	(103533702)	C	MIR3	SINE/MIR	(64)	144	19	822798
3820	8.0	1.8	1.8	chr12	31947577	31948245	(101327064)	+	MER11A	LTR/ERVK	1	737	(499)	826434
6890	16.9	6.5	3.4	chr12	42414334	42415063	(90860246)	C	L1PB3	LINE/L1	(1538)	4608	4126	836589
380	36.1	12.7	4.4	chr12	42415058	42415161	(90860148)	C	L1PB3	LINE/L1	(6574)	529	430	836589
2375	9.1	0.0	0.7	chr12	42415162	42415470	(90859839)	C	AluSg7	SINE/Alu	(2)	307	1	836597
229	25.5	0.0	0.0	chr12	42971144	42971194	(90304115)	C	MERX	DNA/TcMar-Tigger	(398)	358	308	837452
1412	27.4	5.6	7.1	chr12	42971196	42972195	(90303114)	+	L1MEd	LINE/L1	804	1787	(5489)	837451
566	35.1	8.4	6.4	chr12	43096836	43097288	(90178021)	+	L2b	LINE/L2	2913	3375	(0)	837607
2565	13.3	4.2	0.2	chr12	48605175	48605268	(84670041)	C	MSTA	LTR/ERVL-MaLR	(2)	426	333	845401
26	0.0	2.6	5.1	chr12	48605269	48605306	(84670003)	+	(CACAGTTC)n	Simple_repeat	1	39	(0)	845402
2565	13.3	4.2	0.2	chr12	48605307	48605618	(84669691)	C	MSTA	LTR/ERVL-MaLR	(96)	332	4	845401
10194	15.3	1.6	0.6	chr12	48605621	48607233	(84668076)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	845401
1828	14.3	6.1	0.6	chr12	50842484	50842841	(82432468)	C	MER31A	LTR/ERV1	(0)	485	107	850117
300	29.2	14.4	4.3	chr12	52903183	52903368	(80371941)	C	MIRb	SINE/MIR	(32)	236	29	853626
13	8.5	4.0	0.0	chr12	54017052	54017076	(79258233)	+	(GGGGA)n	Simple_repeat	1	26	(0)	855759
26	18.7	1.6	1.6	chr12	54017343	54017405	(79257904)	+	GA-rich	Low_complexity	1	64	(0)	855760
13	14.8	0.0	3.1	chr12	54161856	54161887	(79113422)	+	G-rich	Low_complexity	1	32	(0)	855963
12	15.8	2.6	5.0	chr12	54555806	54555844	(78719465)	+	(CTCCCTT)n	Simple_repeat	1	40	(0)	856645
20	24.6	6.0	1.1	chr12	56104552	56104639	(77170670)	+	(CTCG)n	Simple_repeat	1	92	(0)	858918
3814	4.8	1.7	1.2	chr12	56852742	56853102	(76422207)	+	MER11A	LTR/ERVK	1	463	(803)	860373
2655	8.4	0.0	0.0	chr12	56853103	56853411	(76421898)	C	AluY	SINE/Alu	(2)	309	1	860374
2083	11.8	14.9	1.1	chr12	63809508	63809875	(69465434)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	869962
5898	14.1	6.3	3.2	chr12	63809876	63810328	(69464981)	+	Tigger3b	DNA/TcMar-Tigger	298	776	(455)	869961
2559	7.7	0.0	0.3	chr12	63853023	63853320	(69421989)	C	AluSq2	SINE/Alu	(16)	297	1	870052
394	19.9	5.8	8.8	chr12	63853384	63853543	(69421766)	+	L1ME4a	LINE/L1	5734	5888	(236)	870053
202	20.8	11.7	0.0	chr12	63853589	63853641	(69421668)	C	MIRb	SINE/MIR	(6)	262	203	870054
1747	22.6	9.7	3.1	chr12	64075522	64075943	(69199366)	C	Kanga2_a	DNA/TcMar-Tc2	(324)	564	116	870461
1626	27.3	8.7	5.0	chr12	64076111	64076653	(69198656)	+	L1ME3A	LINE/L1	622	1194	(5048)	870463
16044	13.7	1.4	1.9	chr12	66407257	66408196	(66867113)	+	L1MA2	LINE/L1	1	944	(6621)	874363
23348	12.4	2.1	0.9	chr12	66553491	66558160	(66717149)	+	L1MA3	LINE/L1	15	4758	(2807)	874553
1643	22.9	3.4	7.3	chr12	69199000	69199462	(64075847)	C	MLT1J1	LTR/ERVL-MaLR	(0)	444	1	878885
663	22.9	4.9	4.9	chr12	69480630	69480914	(63794395)	C	L1MEd	LINE/L1	(6112)	974	690	879373
920	18.0	7.0	4.7	chr12	69481020	69481281	(63794028)	C	L1MC4	LINE/L1	(1)	8041	7776	879377
313	28.9	2.8	3.9	chr12	70287435	70287671	(62987638)	C	L1MEd	LINE/L1	(3280)	2866	2574	880682
441	32.7	2.5	0.7	chr12	70287854	70288007	(62987302)	C	L1MEd	LINE/L1	(6420)	683	527	880682
2275	11.2	0.0	1.9	chr12	70288137	70288449	(62986860)	C	AluSq2	SINE/Alu	(6)	307	1	880683
13	0.0	5.0	0.0	chr12	70366024	70366043	(62909266)	+	(TTA)n	Simple_repeat	1	21	(0)	880780
27	3.3	0.0	0.0	chr12	70366181	70366211	(62909098)	+	(GGGCG)n	Simple_repeat	1	31	(0)	880781
13	18.1	2.0	6.0	chr12	70366380	70366428	(62908881)	+	(GGCGG)n	Simple_repeat	1	50	(0)	880782
21	28.2	0.0	3.8	chr12	70366626	70366704	(62908605)	+	(GCG)n	Simple_repeat	1	79	(0)	880783
152	23.6	1.3	2.0	chr12	71135182	71135572	(62139737)	+	GA-rich	Low_complexity	1	396	(0)	881905
11092	9.8	1.6	2.9	chr12	72070306	72071906	(61203403)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	883324
3290	19.8	16.7	7.1	chr12	73645234	73646245	(59629064)	C	LTR28C	LTR/ERV1	(0)	1129	1	885221
16500	16.7	2.4	5.0	chr12	82619350	82620682	(50654627)	+	L1M1	LINE/L1	733	2076	(5489)	898005
17791	17.1	5.1	1.6	chr12	83704763	83708935	(49566374)	+	L1M1	LINE/L1	9	4326	(3239)	899372
1297	26.0	5.7	0.9	chr12	87541226	87541574	(45733735)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	8	904365
22167	15.1	2.2	2.1	chr12	89769142	89771604	(43503705)	C	ERVL-B4-int	LTR/ERVL	(2052)	3662	1244	907558
642	18.7	0.9	0.0	chr12	89960354	89960460	(43314849)	+	MER81	DNA/hAT-Blackjack	3	110	(4)	907840
1418	31.6	6.9	2.0	chr12	102276350	102277235	(30998074)	C	L1ME3Cz	LINE/L1	(5705)	1398	467	928804
3015	26.7	9.9	4.8	chr12	103830297	103831072	(29444237)	C	L1MEd	LINE/L1	(4833)	1582	728	931371
2128	12.2	7.1	1.4	chr12	103831073	103831431	(29443878)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	931373
11	34.9	1.4	1.4	chr12	105084548	105084617	(28190692)	+	(GCCCGCC)n	Simple_repeat	1	71	(0)	933802
281	33.8	7.7	5.7	chr12	106753171	106753524	(26521785)	+	L2b	LINE/L2	2927	3288	(87)	936783
6151	18.2	2.8	0.6	chr12	109042634	109043843	(24231466)	+	L1MB3	LINE/L1	4015	5252	(888)	941614
1650	19.1	10.3	12.2	chr12	109341207	109341435	(23933874)	C	Zaphod3	DNA/hAT-Tip100	(584)	2039	1827	942333
2577	20.5	2.0	1.1	chr12	109341436	109341988	(23933321)	C	MER89	LTR/ERV1	(1)	558	1	942335
2222	26.9	5.2	4.8	chr12	112959490	112960404	(20314905)	C	L1ME3	LINE/L1	(5790)	1313	395	950469
1316	27.2	10.4	5.0	chr12	113122623	113123383	(20151926)	C	L1MEd	LINE/L1	(5682)	1404	617	950843
1597	23.7	8.8	0.5	chr12	114080489	114080924	(19194385)	+	MER68	LTR/ERVL	88	563	(0)	953078
1632	18.3	7.1	1.2	chr12	116280815	116281157	(16994152)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	957637
1162	24.5	30.0	3.1	chr12	116281158	116281689	(16993620)	+	L1ME4b	LINE/L1	154	845	(47)	957635
1163	27.6	12.3	4.4	chr12	117088781	117090260	(16185049)	+	L1MEd	LINE/L1	83	1722	(5381)	959543
1108	22.3	12.2	8.4	chr12	117960271	117960735	(15314574)	+	MLT1H2	LTR/ERVL-MaLR	1	485	(4)	961496
444	35.7	11.7	2.2	chr12	117994553	117994921	(15280388)	+	L2b	LINE/L2	2965	3373	(2)	961586
530	27.0	25.2	0.8	chr12	117995046	117995408	(15279901)	C	L1MEd	LINE/L1	(6151)	935	478	961587
1744	17.7	3.5	1.3	chr12	117995447	117995548	(15279761)	+	AluJb	SINE/Alu	1	102	(210)	961588
19	11.1	0.0	0.0	chr12	121026178	121026206	(12249103)	+	(GA)n	Simple_repeat	1	29	(0)	968411
1279	23.0	19.0	2.9	chr12	121026376	121026569	(12248740)	C	LTR16C	LTR/ERVL	(0)	489	274	968412
2119	13.4	0.3	0.3	chr12	121026570	121026868	(12248441)	+	AluSx1	SINE/Alu	1	299	(13)	968413
761	22.7	0.0	3.8	chr12	122018183	122018342	(11256967)	C	MER63A	DNA/hAT-Blackjack	(0)	210	57	970910
559	31.2	11.3	2.3	chr12	122018430	122018773	(11256536)	+	L1MEg	LINE/L1	509	925	(5300)	970911
589	23.3	7.6	2.2	chr12	122018827	122019024	(11256285)	C	MER102a	DNA/hAT-Charlie	(2)	328	116	970912
15	5.5	0.0	0.0	chr12	122969172	122969190	(10306119)	+	(C)n	Simple_repeat	1	19	(0)	973073
1020	9.3	3.0	1.2	chr12	122969292	122969455	(10305854)	+	L1MB8	LINE/L1	6007	6173	(5)	973074
953	31.6	6.6	2.3	chr12	124157019	124157815	(9117494)	C	L2a	LINE/L2	(0)	3426	2526	975577
1492	21.4	2.2	2.0	chr12	124476918	124477110	(8798199)	+	L1MB5	LINE/L1	5816	6007	(167)	976124
2740	9.7	1.3	0.3	chr12	124477111	124477481	(8797828)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	976126
250	27.0	7.1	0.3	chr12	124538866	124538991	(8736318)	C	MIRb	SINE/MIR	(79)	183	47	976239
13	28.9	1.4	5.3	chr12	124539231	124539304	(8736005)	+	(CACT)n	Simple_repeat	1	75	(0)	976240
13	22.5	2.0	3.9	chr12	124539282	124539331	(8735978)	+	(CACTCA)n	Simple_repeat	1	51	(0)	976241
2130	9.8	0.8	0.4	chr12	127958747	127959012	(5316297)	+	AluSg	SINE/Alu	40	306	(4)	982346
791	32.5	9.7	5.3	chr12	127959013	127959182	(5316127)	C	MLT1D	LTR/ERVL-MaLR	(457)	170	1	982345
328	31.2	0.9	3.5	chr12	127959234	127959346	(5315963)	C	MamGypLTR3a	LTR/Gypsy	(631)	350	241	982347
564	30.7	3.9	2.8	chr12	127959408	127959689	(5315620)	+	MLT1J	LTR/ERVL-MaLR	228	512	(0)	982348
1286	22.6	9.2	0.0	chr12	128092449	128092863	(5182446)	+	MER89	LTR/ERV1	1	559	(0)	982573
249	28.9	5.3	0.0	chr12	128092864	128092953	(5182356)	+	MIR	SINE/MIR	147	241	(21)	982572
1174	9.6	3.5	0.0	chr12	128092991	128093156	(5182153)	C	MER30	DNA/hAT-Charlie	(0)	230	59	982574
267	33.9	7.6	7.1	chr12	129620998	129621247	(3654062)	+	L2	LINE/L2	2814	3078	(341)	985368
972	26.2	12.0	5.0	chr12	130669931	130670308	(2605001)	+	MLT1D	LTR/ERVL-MaLR	46	453	(52)	987013
245	27.5	1.0	11.7	chr12	130670414	130670541	(2604768)	+	L2a	LINE/L2	3000	3117	(309)	987014
1991	13.4	4.6	0.0	chr12	130670764	130671053	(2604256)	C	AluSx1	SINE/Alu	(2)	310	7	987015
16	23.9	0.0	8.6	chr12	133037457	133037537	(237772)	+	G-rich	Low_complexity	1	81	(0)	990398
846	23.9	14.0	5.5	chr13	21749705	21750192	(92614136)	C	L1MEd	LINE/L1	(5872)	1214	679	996618
554	32.1	13.7	2.0	chr13	21750270	21750551	(92613777)	C	L1MEd	LINE/L1	(6564)	522	193	996618
17	4.3	0.0	0.0	chr13	27917607	27917630	(86446698)	+	(TAA)n	Simple_repeat	1	24	(0)	1005746
1497	19.6	21.4	9.3	chr13	30659689	30660460	(83703868)	C	MER52C	LTR/ERV1	(0)	1278	211	1010151
331	32.9	7.6	5.0	chr13	31001639	31001757	(83362571)	C	MIR3	SINE/MIR	(21)	187	64	1010715
332	29.1	10.1	7.7	chr13	32647581	32648029	(81716299)	C	L1MEg	LINE/L1	(5211)	1031	532	1013160
2356	18.7	1.4	2.0	chr13	34138272	34138774	(80225554)	+	MER89	LTR/ERV1	1	500	(59)	1015359
2872	15.2	3.4	4.4	chr13	35758872	35759434	(78604894)	+	MER89	LTR/ERV1	3	559	(0)	1017613
27	8.8	0.0	0.0	chr13	36157345	36157381	(78206947)	+	(A)n	Simple_repeat	1	37	(0)	1018138
11186	10.5	1.8	0.0	chr13	37836267	37837815	(76526513)	+	THE1B-int	LTR/ERVL-MaLR	1	1578	(2)	1020506
1958	19.4	4.2	1.8	chr13	39229526	39229883	(75134445)	+	MLT2D	LTR/ERVL	6	366	(48)	1022344
54	0.0	0.0	0.0	chr13	39229884	39229929	(75134399)	+	(AC)n	Simple_repeat	1	46	(0)	1022345
1958	19.4	4.2	1.8	chr13	39229930	39229969	(75134359)	+	MLT2D	LTR/ERVL	367	413	(1)	1022344
1223	17.7	17.1	6.5	chr13	41151571	41152092	(73212236)	+	LTR29	LTR/ERV1	1	616	(6)	1025349
345	16.8	0.0	1.9	chr13	41152094	41152170	(73212158)	+	MER4-int	LTR/ERV1	3690	3750	(3168)	1025348
1339	21.2	15.8	7.3	chr13	41152174	41152655	(73211673)	C	LTR8B	LTR/ERV1	(20)	800	270	1025350
1696	28.6	13.3	3.3	chr13	42391229	42392767	(71971561)	C	L1MEi	LINE/L1	(661)	1804	1	1027300
263	34.3	8.5	3.5	chr13	43636908	43637052	(70727276)	+	MIR3	SINE/MIR	19	171	(37)	1029133
14231	15.8	4.4	1.9	chr13	43821524	43824016	(70540312)	C	L1M1	LINE/L1	(4955)	2610	15	1029388
25	13.7	0.0	0.0	chr13	45812662	45812701	(68551627)	+	(AC)n	Simple_repeat	1	40	(0)	1032875
1067	15.7	0.0	0.0	chr13	49787508	49787673	(64576655)	C	AluSz6	SINE/Alu	(13)	299	134	1039037
2553	6.5	0.0	0.0	chr13	49787674	49787979	(64576349)	C	AluSx	SINE/Alu	(6)	306	1	1039038
16	0.0	0.0	0.0	chr13	51304205	51304222	(63060106)	+	(GA)n	Simple_repeat	1	18	(0)	1041363
397	29.0	5.1	3.0	chr13	51304314	51304448	(63059880)	C	MER63A	DNA/hAT-Blackjack	(48)	162	25	1041364
4380	7.8	0.2	0.0	chr13	51304539	51305091	(63059237)	+	MER41A	LTR/ERV1	1	554	(0)	1041365
4101	24.9	12.3	5.5	chr13	51871852	51873494	(62490834)	+	HAL1	LINE/L1	567	2336	(171)	1042234
337	25.3	7.5	0.0	chr13	51873496	51873582	(62490746)	C	MER5A	DNA/hAT-Charlie	(0)	189	96	1042239
390	36.5	2.3	2.3	chr13	51873583	51873798	(62490530)	+	L2c	LINE/L2	2983	3198	(189)	1042240
1662	23.9	8.0	2.0	chr13	56463272	56464029	(57900299)	C	L1MEc	LINE/L1	(4645)	1770	827	1048369
2301	7.8	1.3	3.3	chr13	56464030	56464335	(57899993)	C	AluY	SINE/Alu	(10)	301	2	1048372
410	23.4	3.3	7.0	chr13	56464336	56464389	(57899939)	C	L1MEc	LINE/L1	(5574)	826	779	1048369
279	16.4	3.5	1.8	chr13	56464428	56464483	(57899845)	+	MER20	DNA/hAT-Charlie	163	219	(0)	1048373
368	26.0	2.0	0.0	chr13	56464485	56464584	(57899744)	+	L1MEc	LINE/L1	645	746	(5654)	1048374
2270	11.2	0.0	0.3	chr13	60253476	60253771	(54110557)	+	AluSc8	SINE/Alu	1	295	(16)	1053242
6585	6.7	1.4	0.2	chr13	60253772	60254980	(54109348)	+	L1PA6	LINE/L1	4933	6153	(1)	1053241
6961	17.9	8.6	7.7	chr13	61765292	61767029	(52597299)	C	MER52A	LTR/ERV1	(0)	1755	1	1055165
2231	6.8	0.0	2.2	chr13	61823644	61823921	(52540407)	C	AluYj4	SINE/Alu	(0)	311	40	1055244
11198	10.7	0.8	0.1	chr13	61877868	61879435	(52484893)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1055307
8180	14.2	4.4	8.7	chr13	62045425	62047076	(52317252)	C	LTR12C	LTR/ERV1	(0)	1579	3	1055532
4868	17.1	8.5	1.8	chr13	62099586	62100493	(52263835)	+	LTR1D	LTR/ERV1	1	975	(0)	1055583
5050	12.2	3.8	3.8	chr13	62115189	62116025	(52248303)	+	LTR1A2	LTR/ERV1	1	837	(0)	1055598
3785	24.5	2.6	2.6	chr13	62348977	62350378	(52013950)	+	L1PA10	LINE/L1	1	2728	(4891)	1055908
2529	10.5	2.8	1.4	chr13	62367952	62368310	(51996018)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1055923
330	34.8	4.8	3.3	chr13	62368319	62368502	(51995826)	C	MIRb	SINE/MIR	(78)	190	4	1055921
3228	27.7	6.3	5.5	chr13	62886911	62888198	(51476130)	C	L1PA13	LINE/L1	(5378)	1407	16	1056563
5644	18.9	2.8	1.7	chr13	63367175	63368291	(50996037)	C	LTR28C	LTR/ERV1	(0)	1129	1	1057166
4779	20.6	10.2	5.7	chr13	63511282	63512484	(50851844)	+	LTR2752	LTR/ERV1	1	1263	(0)	1057382
603	33.2	3.6	2.4	chr13	63565639	63565885	(50798443)	C	MIR	SINE/MIR	(11)	251	2	1057455
7864	19.8	10.6	0.4	chr13	63565890	63567465	(50796863)	+	MER52A	LTR/ERV1	1	1755	(0)	1057456
1943	22.1	8.0	2.7	chr13	64333866	64334562	(50029766)	+	LTR27D	LTR/ERV1	139	1073	(4)	1058409
852	29.7	9.1	4.8	chr13	64521851	64522397	(49841931)	C	L1MEh	LINE/L1	(631)	1604	1042	1058637
2425	18.6	7.8	8.7	chr13	64522398	64522997	(49841331)	C	LTR27B	LTR/ERV1	(0)	594	1	1058638
852	29.7	9.1	4.8	chr13	64522998	64523160	(49841168)	C	L1MEh	LINE/L1	(1194)	1041	860	1058637
2657	15.1	1.4	0.5	chr13	64737578	64738002	(49626326)	+	MER57A1	LTR/ERV1	1	429	(3)	1058927
5338	13.4	1.1	0.4	chr13	64738006	64738804	(49625524)	+	MER57-int	LTR/ERV1	1	805	(6732)	1058927
257	27.3	11.5	1.8	chr13	65034257	65034420	(49329908)	C	MER52A	LTR/ERV1	(2)	1753	1572	1059252
17	31.6	4.0	5.1	chr13	65174254	65174404	(49189924)	+	(CTTTTC)n	Simple_repeat	1	157	(0)	1059438
4945	11.9	3.6	1.1	chr13	65330371	65331186	(49033142)	C	LTR1A2	LTR/ERV1	(0)	837	1	1059669
37	33.5	3.1	3.4	chr13	65331187	65331252	(49033076)	+	(AT)n	Simple_repeat	2	69	(0)	1059670
1327	23.2	11.3	7.7	chr13	65582118	65582704	(48781624)	+	LTR36	LTR/ERV1	1	611	(0)	1059984
1951	19.6	2.3	1.8	chr13	65582705	65582792	(48781536)	+	MER57B1	LTR/ERV1	315	399	(2)	1059983
13	12.0	0.0	3.5	chr13	65633159	65633187	(48731141)	+	(TTGT)n	Simple_repeat	1	29	(0)	1060058
568	36.0	7.4	0.3	chr13	65648564	65648889	(48715439)	+	LTR33	LTR/ERVL	6	356	(159)	1060079
1892	26.1	4.7	3.1	chr13	65838434	65838891	(48525437)	C	MER90a	LTR/ERV1	(141)	473	1	1060277
2153	12.8	0.6	0.6	chr13	66123778	66124089	(48240239)	C	AluSx	SINE/Alu	(0)	312	1	1060649
638	23.8	6.0	1.9	chr13	66124091	66124296	(48240032)	C	L1ME2	LINE/L1	(41)	6123	5909	1060650
11168	11.4	0.4	0.4	chr13	66276459	66278038	(48086290)	+	THE1B-int	LTR/ERVL-MaLR	2	1580	(0)	1060833
353	27.4	0.0	0.0	chr13	67709639	67709722	(46654606)	+	MER89	LTR/ERV1	1	84	(475)	1062605
1387	22.5	6.5	3.5	chr13	67709701	67710041	(46654287)	+	MER89	LTR/ERV1	197	548	(11)	1062605
331	28.5	7.8	4.1	chr13	67710109	67710280	(46654048)	+	MER90a	LTR/ERV1	436	614	(0)	1062606
1926	21.6	3.9	1.6	chr13	67912018	67914966	(46449362)	C	SATR2	Satellite	(168)	2609	1	1062863
25	19.9	0.0	0.0	chr13	68047908	68047954	(46316374)	+	(T)n	Simple_repeat	1	47	(0)	1063029
10836	11.8	0.2	2.9	chr13	68224216	68225834	(46138494)	C	THE1B-int	LTR/ERVL-MaLR	(5)	1575	1	1063264
1820	18.2	0.0	0.0	chr13	68987621	68987925	(45376403)	C	AluSz6	SINE/Alu	(0)	312	1	1064219
4411	11.9	2.1	3.9	chr13	69659864	69660883	(44703445)	+	MER11A	LTR/ERVK	1	1266	(0)	1065062
633	31.6	4.9	5.3	chr13	70203162	70203757	(44160571)	+	L1ME3D	LINE/L1	5468	6080	(162)	1065828
1042	25.5	12.0	0.9	chr13	70203758	70204074	(44160254)	+	LTR18A	LTR/ERVL	1	357	(0)	1065829
293	28.8	2.1	8.9	chr13	70204075	70204191	(44160137)	+	L1ME3D	LINE/L1	6073	6123	(0)	1065828
1600	18.0	8.0	11.0	chr13	70560171	70560650	(43803678)	+	MSTA1	LTR/ERVL-MaLR	2	465	(0)	1066296
13	18.4	1.7	8.5	chr13	71087423	71087480	(43276848)	+	(AATA)n	Simple_repeat	1	59	(0)	1067002
5533	10.1	6.5	10.1	chr13	71087486	71088728	(43275600)	+	LTR12C	LTR/ERV1	439	1579	(0)	1067003
548	10.3	0.0	0.0	chr13	72329690	72329767	(42034561)	C	MADE1	DNA/TcMar-Mariner	(0)	80	3	1068645
1965	17.7	4.7	3.2	chr13	72329768	72330115	(42034213)	C	MLT1A1	LTR/ERVL-MaLR	(53)	355	1	1068644
274	27.6	10.1	4.1	chr13	72534851	72534971	(41829357)	C	MIR1_Amn	SINE/MIR	(84)	146	18	1068911
15	10.6	6.8	4.3	chr13	73075957	73076000	(41288328)	+	A-rich	Low_complexity	1	47	(0)	1069866
2308	11.7	3.2	0.0	chr13	73640116	73640414	(40723914)	+	AluSz6	SINE/Alu	1	309	(3)	1070872
424	12.1	8.3	0.0	chr13	73640462	73640527	(40723801)	+	MSTB1	LTR/ERVL-MaLR	1	72	(360)	1070873
27928	2.6	0.1	0.1	chr13	73640528	73646551	(40717777)	+	L1PA2	LINE/L1	136	6155	(0)	1070874
6452	20.2	10.9	2.9	chr13	74413306	74414829	(39949499)	+	MER52A	LTR/ERV1	1	1755	(0)	1071916
7250	7.5	13.9	1.1	chr13	75183162	75184263	(39180065)	+	MER11A	LTR/ERVK	1	1266	(0)	1072947
440	18.4	6.4	0.0	chr13	76052157	76052259	(38312069)	+	L1MA9	LINE/L1	6171	6280	(32)	1074248
15	19.4	4.1	2.0	chr13	76052297	76052313	(38312015)	+	(ACAGAG)n	Simple_repeat	1	50	(0)	1074249
17	14.2	3.2	0.0	chr13	76052314	76052344	(38311984)	+	GA-rich	Low_complexity	1	32	(0)	1074250
8506	10.6	12.3	2.0	chr13	76189948	76191358	(38172970)	+	LTR12C	LTR/ERV1	2	1578	(1)	1074402
232	27.9	4.8	2.5	chr13	76271685	76271765	(38092563)	C	MIR3	SINE/MIR	(6)	202	120	1074504
939	12.4	10.6	0.0	chr13	76271807	76271983	(38092345)	+	L1PB1	LINE/L1	3	200	(6663)	1074505
10024	14.7	4.7	0.9	chr13	76271963	76275663	(38088665)	+	L1PB1	LINE/L1	811	4708	(2154)	1074505
1495	21.1	0.7	2.3	chr13	76314497	76314806	(38049522)	C	MER61A	LTR/ERV1	(36)	305	1	1074555
28	14.4	0.0	0.0	chr13	76314857	76314902	(38049426)	+	(A)n	Simple_repeat	1	46	(0)	1074556
32	0.0	0.0	0.0	chr13	76315019	76315048	(38049280)	+	(TTAT)n	Simple_repeat	1	30	(0)	1074557
2015	15.1	0.7	0.0	chr13	76414130	76414421	(37949907)	C	AluSz	SINE/Alu	(18)	294	1	1074694
459	35.8	8.6	3.4	chr13	76414422	76414506	(37949822)	C	L1MEg	LINE/L1	(5396)	846	764	1074692
6979	7.6	15.2	2.5	chr13	77109706	77110805	(37253523)	+	MER11A	LTR/ERVK	1	1266	(0)	1075718
2403	8.5	0.0	2.5	chr13	77301133	77301449	(37062879)	+	AluSz	SINE/Alu	1	309	(3)	1075994
17	7.9	0.0	0.0	chr13	77699235	77699261	(36665067)	+	(TTAT)n	Simple_repeat	1	27	(0)	1076571
7778	20.8	8.5	3.1	chr13	77866933	77868726	(36495602)	+	L1M4b	LINE/L1	12	1912	(4955)	1076779
16	21.2	0.0	7.0	chr13	77868897	77868953	(36495375)	+	(TGAC)n	Simple_repeat	1	57	(0)	1076780
1070	27.3	9.2	3.6	chr13	78532203	78532764	(35831564)	+	HAL1	LINE/L1	1911	2507	(0)	1077674
593	14.3	5.9	3.1	chr13	78611304	78611401	(35752927)	+	AluJb	SINE/Alu	201	301	(11)	1077769
327	30.8	13.8	1.9	chr13	78611497	78611655	(35752673)	+	MIRb	SINE/MIR	20	200	(68)	1077770
2596	26.9	3.9	8.1	chr13	80392321	80392506	(33971822)	C	L1M4	LINE/L1	(1786)	4360	4179	1080292
49	9.8	6.5	2.6	chr13	80392509	80392615	(33971713)	+	(TCCT)n	Simple_repeat	1	114	(0)	1080295
1180	24.3	3.8	2.3	chr13	80392616	80393002	(33971326)	C	L1MD	LINE/L1	(1985)	4161	3769	1080296
566	33.1	4.3	4.3	chr13	80920111	80920413	(33443915)	+	LTR67B	LTR/ERVL	9	311	(309)	1080891
59	12.2	2.8	0.9	chr13	81965610	81965718	(32398610)	+	(TCCT)n	Simple_repeat	1	112	(0)	1082175
1585	21.5	1.0	1.0	chr13	81965719	81966025	(32398303)	C	AluJo	SINE/Alu	(5)	307	1	1082176
4487	8.7	3.9	1.9	chr13	82317183	82318183	(32046145)	C	MER11A	LTR/ERVK	(0)	1266	1	1082614
768	23.3	2.2	4.4	chr13	82318189	82318417	(32045911)	C	L1MC3	LINE/L1	(1445)	6340	6117	1082613
7292	10.2	8.8	1.6	chr13	83516768	83517929	(30846399)	+	LTR12D	LTR/ERV1	1	1254	(0)	1084079
684	33.6	6.2	2.5	chr13	83675012	83675337	(30688991)	+	LTR16C	LTR/ERVL	72	410	(79)	1084266
8023	5.1	0.0	0.1	chr13	83675422	83676387	(30687941)	C	LTR13A	LTR/ERVK	(0)	966	2	1084267
1826	13.8	6.6	7.3	chr13	84027622	84028005	(30336323)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1084704
1769	26.3	0.4	10.2	chr13	84463351	84463646	(29900682)	+	MLT2B3	LTR/ERVL	141	406	(264)	1085272
2676	5.5	0.0	0.0	chr13	84463647	84463956	(29900372)	C	AluY	SINE/Alu	(1)	310	1	1085273
7364	12.9	13.9	3.2	chr13	85204732	85206134	(29158194)	+	LTR12C	LTR/ERV1	3	1579	(0)	1086229
3454	15.5	4.5	0.2	chr13	89130210	89130804	(25233524)	+	LTR77	LTR/ERV1	1	622	(0)	1091199
5066	9.6	1.0	0.3	chr13	89130839	89131559	(25232769)	+	L1PA10	LINE/L1	5440	6165	(3)	1091200
4294	14.8	1.6	5.3	chr13	90603110	90603866	(23760462)	C	LTR1F1	LTR/ERV1	(0)	729	1	1093125
219	36.3	5.3	0.0	chr13	93038582	93038705	(21325623)	+	MIRb	SINE/MIR	120	250	(18)	1096356
2351	18.8	8.3	1.2	chr13	94545251	94545761	(19818567)	+	MER89	LTR/ERV1	5	555	(4)	1098489
2345	18.3	6.8	2.6	chr13	94545913	94546498	(19817830)	+	MER67B	LTR/ERV1	1	658	(3)	1098490
4073	6.5	7.6	1.1	chr13	95669666	95670601	(18693727)	C	MER11A	LTR/ERVK	(0)	1266	1	1100516
10486	15.8	3.1	1.6	chr13	95670602	95672310	(18692018)	C	L1M1	LINE/L1	(5818)	1747	13	1100515
3080	15.8	4.7	0.0	chr13	97583689	97584221	(16780107)	C	MER89	LTR/ERV1	(0)	559	1	1103221
1104	21.3	9.8	9.1	chr13	99830822	99831296	(14533032)	+	MLT1D	LTR/ERVL-MaLR	27	505	(0)	1106908
2823	19.6	1.2	1.2	chr13	100720278	100720836	(13643492)	+	MER89	LTR/ERV1	1	559	(0)	1108390
138	26.3	1.5	0.8	chr13	113152581	113152974	(1211354)	+	GA-rich	Low_complexity	1	400	(0)	1124251
11	16.9	2.9	2.8	chr13	113490128	113490162	(874166)	+	(ACAGCT)n	Simple_repeat	1	36	(0)	1124762
15	27.3	1.4	4.2	chr13	113490353	113490423	(873905)	+	(CCCCGG)n	Simple_repeat	1	72	(0)	1124763
2176	18.0	1.0	4.7	chr14	20679562	20679963	(86363755)	+	MLT1B	LTR/ERVL-MaLR	4	390	(0)	1128454
242	24.1	0.0	0.0	chr14	20679964	20680017	(86363701)	+	L1MEg	LINE/L1	1215	1268	(4957)	1128451
380	16.9	7.8	1.4	chr14	20680127	20680198	(86363520)	C	MLT1N2	LTR/ERVL-MaLR	(381)	181	105	1128455
2407	11.2	1.0	0.0	chr14	33887381	33887684	(73156034)	+	AluY	SINE/Alu	1	307	(4)	1146867
1000	27.9	9.4	6.5	chr14	33887685	33887889	(73155829)	+	LTR16A1	LTR/ERVL	235	446	(10)	1146866
7446	19.2	2.9	2.8	chr14	37833074	37835237	(69208481)	C	L1MA4	LINE/L1	(3461)	4101	1932	1153461
21007	12.1	3.4	1.6	chr14	39462349	39469921	(67573797)	C	L1MA3	LINE/L1	(0)	7724	15	1155775
432	31.5	10.8	2.2	chr14	43786857	43787244	(63256474)	C	L1ME3A	LINE/L1	(5783)	1320	898	1160882
2038	13.1	0.0	0.0	chr14	43787383	43787656	(63256062)	C	AluSx1	SINE/Alu	(36)	276	3	1160892
299	33.2	14.0	6.7	chr14	47342879	47343220	(59700498)	+	LTR104_Mam	LTR/Gypsy	1101	1471	(38)	1165465
607	21.4	11.4	5.6	chr14	52816995	52817315	(54226403)	C	L1MEd	LINE/L1	(5024)	2079	1738	1173587
539	30.6	4.7	5.4	chr14	52817406	52817702	(54226016)	C	L1MEd	LINE/L1	(6331)	772	478	1173587
2538	9.5	0.0	0.3	chr14	55528921	55529225	(51514493)	C	AluSz	SINE/Alu	(8)	304	1	1177872
2410	28.4	14.1	5.0	chr14	55529226	55530290	(51513428)	+	L1MEd	LINE/L1	507	1711	(5375)	1177870
470	28.6	9.9	2.6	chr14	56130186	56130409	(50913309)	C	MIRb	SINE/MIR	(10)	258	16	1178839
15	20.0	0.0	0.0	chr14	56130427	56130455	(50913263)	+	(T)n	Simple_repeat	1	29	(0)	1178840
1591	26.7	2.8	7.9	chr14	58113449	58114241	(48929477)	C	L1ME3D	LINE/L1	(5776)	1327	577	1181639
2498	13.8	10.7	0.5	chr14	60309919	60310354	(46733364)	C	MER66B	LTR/ERV1	(0)	486	1	1184870
2431	7.9	0.3	0.0	chr14	60318477	60318768	(46724950)	+	AluY	SINE/Alu	1	293	(18)	1184881
768	18.8	0.0	9.7	chr14	60318769	60318860	(46724858)	C	MER3	DNA/hAT-Charlie	(80)	129	42	1184880
2209	11.8	9.1	4.7	chr14	60318861	60319268	(46724450)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1184882
311	28.9	4.3	2.8	chr14	61832738	61833057	(45210661)	C	L1MEd	LINE/L1	(6061)	1042	691	1187145
2394	8.6	2.6	0.0	chr14	61833282	61833584	(45210134)	C	AluSp	SINE/Alu	(2)	311	1	1187147
2145	12.6	1.6	1.0	chr14	69009042	69009351	(38034367)	+	AluSz	SINE/Alu	1	312	(0)	1198679
1285	28.7	9.8	9.0	chr14	69009352	69009752	(38033966)	+	L1MEd	LINE/L1	574	963	(6123)	1198678
311	28.9	11.3	1.3	chr14	71758770	71758920	(35284798)	C	MER96	DNA/hAT-Tip100	(0)	175	8	1203279
280	25.5	16.7	1.8	chr14	71758923	71759034	(35284684)	C	MER102a	DNA/hAT-Charlie	(83)	247	116	1203280
203	27.3	5.2	0.0	chr14	72103939	72103993	(34939725)	+	MIR	SINE/MIR	184	241	(21)	1203808
650	22.4	5.4	4.4	chr14	72104305	72104579	(34939139)	C	Charlie29a	DNA/hAT-Charlie	(0)	719	442	1203809
1470	16.6	1.5	2.5	chr14	73561977	73562185	(33481533)	+	L1MB3	LINE/L1	5829	6020	(151)	1206561
3592	11.9	7.1	3.7	chr14	73562186	73563261	(33480457)	+	MER11A	LTR/ERVK	1	1232	(4)	1206565
265	32.7	1.2	0.5	chr14	74632125	74632216	(32411502)	+	MIR3	SINE/MIR	85	184	(46)	1208873
283	21.9	2.7	0.0	chr14	74632326	74632398	(32411320)	+	MLT1K	LTR/ERVL-MaLR	21	95	(500)	1208874
1110	18.1	1.4	7.7	chr14	76569161	76569394	(30474324)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1212493
1127	31.2	6.7	11.2	chr14	76569395	76569782	(30473936)	+	L1MEd	LINE/L1	427	791	(6295)	1212491
508	14.8	0.0	0.0	chr14	76569783	76569870	(30473848)	+	L1MB7	LINE/L1	6090	6177	(7)	1212494
1127	31.2	6.7	11.2	chr14	76569871	76569927	(30473791)	+	L1MEd	LINE/L1	792	843	(6243)	1212491
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
16	9.6	2.7	5.3	chr14	81220663	81220699	(25823019)	+	GA-rich	Low_complexity	1	38	(0)	1220300
14	17.1	7.1	3.3	chr14	81220829	81220884	(25822834)	+	(CCGCTG)n	Simple_repeat	1	60	(0)	1220301
432	33.7	10.2	2.5	chr14	89760262	89761244	(17282474)	C	L2b	LINE/L2	(463)	2956	1890	1232673
445	37.4	10.7	5.9	chr14	89890601	89891282	(17152436)	+	L1ME3F	LINE/L1	61	779	(6324)	1232914
84	6.4	5.3	0.0	chr14	90829464	90829595	(16214123)	+	(AGAA)n	Simple_repeat	1	139	(0)	1234551
276	30.6	9.7	0.8	chr14	90829653	90829774	(16213944)	+	MLT1N2	LTR/ERVL-MaLR	45	178	(384)	1234552
503	20.1	17.1	3.2	chr14	90829869	90830058	(16213660)	+	MLT1N2	LTR/ERVL-MaLR	328	549	(13)	1234552
268	29.1	11.8	2.3	chr14	91374401	91374615	(15669103)	C	L2a	LINE/L2	(149)	3277	3040	1235589
569	25.5	1.9	1.3	chr14	91374799	91374953	(15668765)	+	MER117	DNA/hAT-Charlie	17	172	(25)	1235590
234	24.1	3.6	0.0	chr14	93594031	93594084	(13449634)	+	BLACKJACK	DNA/hAT-Blackjack	2	57	(2912)	1239708
350	13.7	1.4	6.4	chr14	93594173	93594250	(13449468)	+	MER5A	DNA/hAT-Charlie	48	121	(68)	1239709
360	26.1	7.3	0.0	chr14	99029955	99030069	(8013649)	+	ERV3-16A3_I-int	LTR/ERVL	3686	3809	(1417)	1249373
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
274	29.0	3.1	3.1	chr14	99648033	99648128	(7395590)	C	L2c	LINE/L2	(2)	3373	3278	1250357
2737	23.8	5.2	4.5	chr14	99976341	99976772	(7066946)	C	L1ME3B	LINE/L1	(5281)	961	531	1250932
347	24.1	0.0	0.0	chr14	99976911	99976989	(7066729)	C	L1ME3B	LINE/L1	(5974)	268	190	1250932
339	33.0	9.3	2.0	chr15	20281615	20281916	(81709273)	+	L1MEg	LINE/L1	46	363	(6723)	1263102
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
1092	14.2	0.0	2.5	chr15	29184933	29185094	(72806095)	+	AluJb	SINE/Alu	140	297	(15)	1275074
323	5.4	0.0	0.0	chr15	29185161	29185197	(72805992)	C	AluSp	SINE/Alu	(212)	101	65	1275075
295	28.2	2.3	0.0	chr15	29185413	29185497	(72805692)	C	L1ME1	LINE/L1	(11)	6168	6082	1275076
2319	9.0	0.0	0.0	chr15	29185566	29185854	(72805335)	C	AluSx1	SINE/Alu	(16)	296	8	1275077
2137	15.5	3.5	0.3	chr15	34825536	34825898	(67165291)	+	MER89	LTR/ERV1	183	557	(2)	1283451
2699	4.8	0.0	0.3	chr15	36459947	36460256	(65530933)	+	AluY	SINE/Alu	1	309	(2)	1285678
338	31.9	2.9	1.8	chr15	36460482	36460650	(65530539)	C	MER5B	DNA/hAT-Charlie	(0)	178	8	1285679
18	20.3	3.7	1.8	chr15	41828609	41828662	(60162527)	+	(TTTC)n	Simple_repeat	1	56	(0)	1294147
615	11.6	0.0	1.2	chr15	43910515	43910600	(58080589)	+	AluYe5	SINE/Alu	224	308	(2)	1297864
850	25.9	5.4	0.8	chr15	43910721	43910969	(58080220)	C	MIR	SINE/MIR	(0)	262	2	1297865
2250	12.8	0.0	0.0	chr15	45798086	45798389	(56192800)	C	AluSx1	SINE/Alu	(8)	304	1	1301385
1116	29.8	11.5	6.7	chr15	45798390	45798403	(56192786)	C	L1MEd	LINE/L1	(6173)	913	902	1301384
37	0.0	0.0	0.0	chr15	45798404	45798437	(56192752)	+	(T)n	Simple_repeat	1	34	(0)	1301386
1116	29.8	11.5	6.7	chr15	45798438	45799066	(56192123)	C	L1MEd	LINE/L1	(6185)	901	239	1301384
20356	14.9	3.2	4.8	chr15	51524333	51525369	(50465820)	+	L1MA2	LINE/L1	13	1036	(6529)	1309654
307	13.0	0.0	0.0	chr15	51525370	51525415	(50465774)	+	U6	snRNA	1	46	(61)	1309655
20356	14.9	3.2	4.8	chr15	51525416	51527446	(50463743)	+	L1MA2	LINE/L1	1037	3044	(4521)	1309654
3531	15.8	5.8	2.3	chr15	55572007	55572891	(46418298)	+	L1M3	LINE/L1	4567	5487	(825)	1315797
663	24.2	34.8	2.5	chr15	55764371	55764670	(46226519)	C	MLT1J2	LTR/ERVL-MaLR	(0)	444	38	1316140
2086	14.1	0.3	0.3	chr15	55764673	55764977	(46226212)	+	AluSz6	SINE/Alu	1	305	(7)	1316141
305	31.2	4.5	4.5	chr15	59314146	59314346	(42676843)	+	MIRc	SINE/MIR	45	245	(23)	1321817
2509	5.6	2.2	0.0	chr15	65529537	65529842	(36461347)	+	AluSp	SINE/Alu	1	313	(0)	1332844
815	17.8	8.6	7.7	chr15	65529843	65529979	(36461210)	C	MER3	DNA/hAT-Charlie	(64)	145	1	1332843
276	26.7	13.0	7.4	chr15	65530012	65530187	(36461002)	+	L2b	LINE/L2	3183	3408	(18)	1332845
4129	18.9	9.5	2.8	chr15	68045308	68046851	(33944338)	+	MER52D	LTR/ERV1	10	1755	(0)	1337644
2414	7.6	0.3	0.3	chr15	69063244	69063545	(32927644)	+	AluY	SINE/Alu	1	302	(9)	1339547
11	19.2	0.0	7.1	chr15	69063573	69063614	(32927575)	+	(TTCCTC)n	Simple_repeat	1	42	(0)	1339548
13	23.6	1.9	3.7	chr15	69063817	69063869	(32927320)	+	(AGGCCAG)n	Simple_repeat	1	54	(0)	1339549
1702	17.6	0.3	2.0	chr15	69368776	69369070	(32622119)	C	AluJo	SINE/Alu	(22)	290	1	1340090
664	24.9	13.5	1.8	chr15	69369071	69369115	(32622074)	C	L1MEd	LINE/L1	(6170)	933	889	1340080
380	25.9	13.8	0.0	chr15	69369116	69369227	(32621962)	C	L1MEd	LINE/L1	(6247)	856	727	1340080
2193	12.3	0.0	1.0	chr15	69369254	69369554	(32621635)	+	AluSx	SINE/Alu	1	298	(14)	1340091
3883	26.2	8.2	5.8	chr15	70593496	70595757	(31395432)	C	L1MEd	LINE/L1	(3460)	2859	504	1342433
20	3.2	2.9	2.9	chr15	72060389	72060422	(29930767)	+	(AAAATA)n	Simple_repeat	1	35	(0)	1344828
13520	17.7	2.1	0.5	chr15	72060424	72062737	(29928452)	+	L1M1	LINE/L1	172	2523	(5042)	1344829
471	21.7	1.1	0.0	chr15	75487499	75487590	(26503599)	C	L2a	LINE/L2	(0)	3426	3334	1350890
1118	24.1	13.0	11.6	chr15	75487838	75488003	(26503186)	+	Kanga2_a	DNA/TcMar-Tc2	2	170	(718)	1350891
2348	10.4	0.0	0.0	chr15	75488004	75488311	(26502878)	+	AluSq2	SINE/Alu	6	313	(0)	1350892
360	28.6	2.6	8.1	chr15	78130923	78131082	(23860107)	C	MIR	SINE/MIR	(25)	183	33	1355266
15	25.5	6.0	4.8	chr15	78131221	78131337	(23859852)	+	(CCGCGGC)n	Simple_repeat	1	124	(0)	1355267
1703	23.1	5.0	1.8	chr15	78526184	78526672	(23464517)	C	L2a	LINE/L2	(0)	3426	2922	1356101
246	29.8	14.5	0.8	chr15	78526701	78526825	(23464364)	+	MIRc	SINE/MIR	121	265	(3)	1356102
381	16.1	0.0	0.0	chr15	78526938	78526993	(23464196)	+	MSTA	LTR/ERVL-MaLR	145	200	(228)	1356103
2342	9.0	0.0	3.2	chr15	78526994	78527305	(23463884)	+	AluSx	SINE/Alu	1	302	(10)	1356104
2125	18.7	12.0	1.2	chr15	79478957	79479453	(22511736)	C	MER74A	LTR/ERVL	(0)	558	1	1357908
336	23.0	8.3	9.0	chr15	79479454	79479500	(22511689)	C	MIR	SINE/MIR	(211)	51	13	1357907
189	30.0	0.0	0.0	chr15	81420556	81420605	(20570584)	C	L2a	LINE/L2	(10)	3416	3367	1361256
645	27.7	10.3	5.5	chr15	81420607	81421004	(20570185)	C	MLT1L	LTR/ERVL-MaLR	(3)	607	189	1361257
22	18.5	4.1	0.0	chr15	82675128	82675176	(19316013)	+	(CT)n	Simple_repeat	1	51	(0)	1363254
6204	11.4	15.9	3.9	chr15	85164295	85165402	(16825787)	+	MER11A	LTR/ERVK	1	1266	(0)	1367343
485	25.6	3.0	5.8	chr15	85513443	85513691	(16477498)	C	L1MC4	LINE/L1	(36)	8006	7771	1367923
1980	26.4	4.5	3.9	chr15	85513709	85514600	(16476589)	C	L1MC4	LINE/L1	(400)	7642	6746	1367923
394	31.4	23.0	6.5	chr15	85696647	85697267	(16293922)	+	L1MEd	LINE/L1	13	765	(6321)	1368202
2504	7.4	0.0	0.0	chr15	85697289	85697584	(16293605)	+	AluSg	SINE/Alu	1	296	(14)	1368203
987	30.9	6.5	1.4	chr15	93696165	93696854	(8294335)	+	L1MEg	LINE/L1	635	1361	(5742)	1382025
572	31.6	10.9	3.7	chr15	94465933	94466475	(7524714)	C	L1MEd	LINE/L1	(5988)	1115	529	1383073
375	29.5	8.0	1.3	chr15	96314035	96314185	(5677004)	C	MIR3	SINE/MIR	(43)	165	4	1385710
2033	16.8	0.3	0.3	chr15	97661635	97661943	(4329246)	+	AluJb	SINE/Alu	1	309	(3)	1387483
1199	30.5	3.5	3.1	chr15	97662022	97662441	(4328748)	C	LTR16A1	LTR/ERVL	(33)	423	2	1387484
220	11.1	0.0	7.7	chr15	98438552	98438590	(3552599)	C	Penelope1_Vert	LINE/Penelope	(247)	840	805	1388647
904	27.9	10.4	4.8	chr15	99657933	99658799	(2332390)	+	L1ME3B	LINE/L1	630	1526	(5577)	1390428
1526	29.3	5.4	1.6	chr15	100695366	100696111	(1295078)	C	L1MEd	LINE/L1	(5853)	1233	458	1391809
244	26.5	8.4	0.0	chr15	101295783	101295880	(695309)	C	L1ME3	LINE/L1	(19)	6154	6048	1392606
6634	10.8	2.8	0.3	chr15	101596517	101597617	(393572)	C	L1PB1	LINE/L1	(4546)	2317	1193	1392991
2679	10.5	0.5	1.1	chr15	101625184	101625559	(365630)	C	THE1C	LTR/ERVL-MaLR	(1)	374	1	1393029
1180	26.9	3.7	1.8	chr15	101625933	101626440	(364749)	+	L1MDa	LINE/L1	749	1295	(5252)	1393028
341	32.9	7.5	0.6	chr16	1039683	1039844	(89298501)	C	MIR	SINE/MIR	(79)	183	10	1395433
254	23.4	0.0	0.0	chr16	1039970	1040016	(89298329)	C	MIRc	SINE/MIR	(142)	126	80	1395434
14	15.2	0.0	7.1	chr16	1766538	1766579	(88571766)	+	(GCCAGA)n	Simple_repeat	1	42	(0)	1396369
440	25.8	8.5	1.1	chr16	1812619	1812802	(88525543)	+	L1M5	LINE/L1	5022	5220	(926)	1396419
261	33.8	2.1	2.1	chr16	1812906	1813050	(88525295)	+	L1M5	LINE/L1	5505	5649	(530)	1396419
1680	20.9	10.0	0.0	chr16	1813056	1813443	(88524902)	+	MSTB1	LTR/ERVL-MaLR	2	432	(0)	1396420
735	29.5	3.2	0.0	chr16	9047371	9047580	(81290765)	C	MIRc	SINE/MIR	(31)	237	21	1410441
4371	18.1	4.1	9.6	chr16	15913899	15914519	(74423826)	C	L1MB5	LINE/L1	(676)	5498	4900	1425569
1208	12.6	0.0	4.7	chr16	16553973	16554162	(73784183)	C	AluSz6	SINE/Alu	(0)	312	132	1427113
1123	30.2	0.8	2.5	chr16	16554165	16554571	(73783774)	C	L1ME3F	LINE/L1	(6113)	990	591	1427104
1064	30.7	0.8	2.5	chr16	18157902	18158308	(72180037)	+	L1MEd	LINE/L1	574	973	(6113)	1430621
695	36.0	5.7	7.3	chr16	20960729	20961156	(69377189)	+	L1MEd	LINE/L1	366	790	(6296)	1436816
1742	15.0	3.6	7.2	chr16	20961163	20961291	(69377054)	+	MLT1B	LTR/ERVL-MaLR	1	120	(270)	1436819
1723	6.5	0.0	0.0	chr16	20961292	20961507	(69376838)	+	L1PA5	LINE/L1	5939	6154	(0)	1436820
2009	12.5	2.4	0.0	chr16	21021630	21021916	(69316429)	+	AluSz	SINE/Alu	3	296	(16)	1436971
7142	8.6	3.7	0.1	chr16	21636947	21637915	(68700430)	C	LTR12D	LTR/ERV1	(272)	982	1	1438292
188	33.0	7.3	4.4	chr16	26113972	26114196	(64224149)	C	L2b	LINE/L2	(220)	3155	2924	1448389
2130	10.7	1.6	0.0	chr16	30148842	30149141	(60189204)	+	AluY	SINE/Alu	6	310	(1)	1457390
4347	16.8	4.0	1.7	chr16	30149142	30149845	(60188500)	+	L1MB1	LINE/L1	3512	4239	(1907)	1457389
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
304	35.8	10.2	4.5	chr16	33572050	33572315	(56766030)	C	L1MEd	LINE/L1	(6239)	847	565	1462832
261	32.9	9.1	2.0	chr16	33572503	33572803	(56765542)	C	L1MEd	LINE/L1	(6723)	363	46	1462832
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
259	34.4	0.8	5.9	chr16	47711750	47711885	(42626460)	+	MIRc	SINE/MIR	23	151	(117)	1467537
15	25.2	4.3	0.0	chr16	49316627	49316673	(41021672)	+	GA-rich	Low_complexity	1	49	(0)	1470319
525	29.8	2.5	5.6	chr16	49316855	49317106	(41021239)	C	L1MEh	LINE/L1	(23)	2442	2199	1470320
221	36.4	0.0	6.8	chr16	51514313	51514430	(38823915)	C	L2a	LINE/L2	(541)	2878	2769	1474486
427	25.2	1.6	3.9	chr16	51514519	51514646	(38823699)	C	L1MEd	LINE/L1	(6338)	748	624	1474488
636	26.1	6.9	3.3	chr16	51514687	51514896	(38823449)	C	LTR79	LTR/ERVL	(1)	526	309	1474489
5937	12.8	14.4	1.5	chr16	53384166	53385236	(36953109)	+	MER11B	LTR/ERVK	1	1232	(4)	1477755
1397	21.0	8.9	1.7	chr16	56752167	56752519	(33585826)	+	L1MC5	LINE/L1	6914	7294	(2010)	1483681
553	23.2	31.0	0.3	chr16	56862857	56863150	(33475195)	C	LTR16A	LTR/ERVL	(17)	434	40	1483843
1729	14.4	5.5	0.4	chr16	62323819	62324132	(28014213)	C	THE1D	LTR/ERVL-MaLR	(0)	381	50	1493260
2572	6.0	0.0	0.7	chr16	71211359	71211660	(19126685)	+	AluY	SINE/Alu	1	300	(11)	1509276
512	34.2	2.0	4.6	chr16	71211661	71211963	(19126382)	+	L1ME3B	LINE/L1	634	961	(5281)	1509273
1213	24.5	6.8	8.3	chr16	71211959	71212478	(19125867)	+	L1MC4	LINE/L1	7530	8041	(1)	1509277
420	34.8	10.3	5.1	chr16	71586674	71587085	(18751260)	C	L2b	LINE/L2	(8)	3367	2932	1509959
243	31.4	6.2	3.7	chr16	73600862	73600970	(16737375)	+	L2b	LINE/L2	3250	3361	(14)	1513246
781	13.0	4.7	0.0	chr16	75648731	75648853	(14689492)	C	FLAM_C	SINE/Alu	(14)	129	1	1517226
1669	16.8	0.3	2.3	chr16	75648862	75649165	(14689180)	C	AluJr	SINE/Alu	(13)	299	2	1517227
2587	5.0	0.0	0.3	chr16	80898627	80898927	(9439418)	C	AluY	SINE/Alu	(11)	300	1	1526086
1674	14.3	3.5	6.5	chr16	80898928	80899077	(9439268)	C	AluJb	SINE/Alu	(167)	145	1	1526085
1661	7.8	0.0	0.0	chr16	80899291	80899507	(9438838)	C	L1PA8	LINE/L1	(6)	6166	5950	1526087
699	28.8	6.2	1.6	chr16	80924107	80924350	(9413995)	C	L2a	LINE/L2	(235)	3191	2936	1526152
297	24.4	6.5	4.2	chr16	81417260	81417379	(8920966)	+	MER5B	DNA/hAT-Charlie	1	123	(55)	1527215
505	17.8	5.0	17.8	chr16	81417430	81417547	(8920798)	+	MER5A1	DNA/hAT-Charlie	1	102	(64)	1527216
2285	11.2	0.3	1.6	chr16	81417548	81417859	(8920486)	C	AluSx	SINE/Alu	(2)	310	3	1527217
28	0.0	0.0	0.0	chr16	84783780	84783806	(5554539)	+	(TTTG)n	Simple_repeat	1	27	(0)	1533555
2256	13.6	3.7	2.4	chr16	85413748	85414117	(4924228)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1534786
802	25.5	4.4	2.4	chr16	86040659	86040997	(4297348)	C	MLT1G	LTR/ERVL-MaLR	(187)	392	1	1535927
300	16.5	9.2	0.0	chr16	88472663	88472741	(1865604)	C	L1MB4	LINE/L1	(0)	6180	6094	1540008
15	11.3	7.9	0.0	chr17	2853230	2853267	(80404174)	+	G-rich	Low_complexity	1	41	(0)	1550108
585	27.8	6.0	1.4	chr17	5529670	5529954	(77727487)	C	L1MEd	LINE/L1	(6140)	946	648	1555319
492	30.0	7.5	2.5	chr17	5529986	5530224	(77727217)	+	LTR33	LTR/ERVL	264	515	(0)	1555321
12606	16.3	11.3	2.2	chr17	6965224	6966019	(76291422)	+	L1M4a2	LINE/L1	4513	5500	(812)	1557982
262	32.7	2.6	0.9	chr17	7370778	7370888	(75886553)	+	L1MEd	LINE/L1	560	672	(6414)	1558712
832	23.1	1.1	5.6	chr17	7370895	7371089	(75886352)	+	AluJr	SINE/Alu	122	307	(5)	1558713
240	28.4	8.2	0.0	chr17	7371093	7371226	(75886215)	+	L1MEd	LINE/L1	681	826	(6260)	1558712
2345	9.7	0.0	1.3	chr17	7371242	7371552	(75885889)	+	AluY	SINE/Alu	1	307	(4)	1558714
12	13.7	0.0	0.0	chr17	7898533	7898556	(75358885)	+	(AAG)n	Simple_repeat	1	24	(0)	1559725
243	36.4	7.3	11.3	chr17	8793343	8793503	(74463938)	+	L2c	LINE/L2	3097	3264	(123)	1561477
43	4.2	2.0	0.0	chr17	8793504	8793552	(74463889)	+	(GT)n	Simple_repeat	1	50	(0)	1561479
243	36.4	7.3	11.3	chr17	8793553	8793641	(74463800)	+	L2c	LINE/L2	3265	3349	(38)	1561477
870	20.1	11.2	0.0	chr17	9037024	9037252	(74220189)	C	L1ME3A	LINE/L1	(50)	6123	5866	1561948
829	32.0	6.1	4.7	chr17	9037249	9037763	(74219678)	C	L1MEd	LINE/L1	(6237)	849	327	1561949
744	26.6	11.9	5.2	chr17	9037775	9038208	(74219233)	+	L2a	LINE/L2	2715	3186	(240)	1561950
1905	14.6	0.3	2.3	chr17	9735361	9735668	(73521773)	C	AluJo	SINE/Alu	(10)	302	1	1563294
735	19.1	0.8	0.8	chr17	13750914	13751045	(69506396)	+	MER58A	DNA/hAT-Charlie	1	132	(92)	1570285
3140	14.9	3.5	0.4	chr17	13751099	13751598	(69505843)	+	LTR72	LTR/ERV1	4	519	(0)	1570286
248	34.2	2.5	0.0	chr17	13751645	13751723	(69505718)	C	L2a	LINE/L2	(5)	3421	3341	1570287
233	32.2	0.0	0.0	chr17	15022433	15022491	(68234950)	+	MLT1K	LTR/ERVL-MaLR	129	187	(408)	1572397
822	18.7	0.8	0.0	chr17	15022531	15022653	(68234788)	+	FLAM_A	SINE/Alu	2	125	(17)	1572398
259	25.8	12.4	2.4	chr17	15023061	15023183	(68234258)	+	Tigger15a	DNA/TcMar-Tigger	471	607	(108)	1572399
238	30.8	0.0	7.1	chr17	19363230	19363313	(63894128)	C	MIR3	SINE/MIR	(22)	186	109	1580462
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26938006	26938444	(56318997)	+	(GAATG)n	Satellite	3	440	(0)	1585992
289	20.0	1.6	0.0	chr17	26963408	26963467	(56293974)	C	MIR3	SINE/MIR	(53)	155	95	1586030
41	32.5	0.0	0.0	chr17	29293893	29294029	(53963412)	+	(TGG)n	Simple_repeat	1	137	(0)	1590288
19	20.9	1.3	6.6	chr17	32341902	32341976	(50915465)	+	G-rich	Low_complexity	1	76	(0)	1596597
18	22.1	7.5	3.0	chr17	32341977	32341991	(50915450)	+	(GGCCG)n	Simple_repeat	5	101	(0)	1596598
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
789	36.1	3.0	0.8	chr17	36834948	36835332	(46422109)	+	L1MEd	LINE/L1	451	844	(6242)	1604746
626	26.7	5.1	5.0	chr17	36835350	36835694	(46421747)	C	L2a	LINE/L2	(214)	3161	2811	1604745
13	20.2	0.0	2.7	chr17	42659145	42659181	(40598260)	+	(CTCCC)n	Simple_repeat	1	37	(0)	1616103
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
444	27.2	8.9	1.3	chr17	44124298	44124542	(39132899)	+	L1M5	LINE/L1	5558	5823	(301)	1619261
24	8.6	0.0	2.5	chr17	47734430	47734469	(35522972)	+	(GTG)n	Simple_repeat	1	40	(0)	1626627
19	20.2	0.0	2.1	chr17	48544632	48544678	(34712763)	+	(CGG)n	Simple_repeat	1	47	(0)	1628079
554	24.7	10.3	4.2	chr17	49708479	49708668	(33548773)	+	MIRc	SINE/MIR	61	263	(5)	1630437
1649	15.2	6.3	1.1	chr17	51049105	51049374	(32208067)	+	AluJr	SINE/Alu	9	293	(19)	1632984
1520	16.9	0.0	1.3	chr17	51049394	51049629	(32207812)	+	AluJr	SINE/Alu	1	233	(79)	1632985
12	10.4	6.1	2.9	chr17	59332934	59332966	(23924475)	+	(TTCC)n	Simple_repeat	1	35	(0)	1647028
1990	26.6	17.9	5.0	chr17	61980212	61980768	(21276673)	+	L2a	LINE/L2	2114	2797	(622)	1652006
13	19.6	2.9	0.0	chr17	63939860	63939894	(19317547)	+	GA-rich	Low_complexity	1	36	(0)	1655620
828	15.5	0.0	0.0	chr17	64211865	64211980	(19045461)	+	AluJo	SINE/Alu	1	116	(196)	1656094
2410	7.3	0.0	1.3	chr17	64316087	64316386	(18941055)	+	AluSx	SINE/Alu	1	296	(16)	1656312
894	16.2	0.0	0.0	chr17	64316387	64316522	(18940919)	+	FLAM_C	SINE/Alu	1	136	(7)	1656313
242	24.6	4.7	0.0	chr17	64316687	64316747	(18940694)	C	MIR3	SINE/MIR	(2)	206	143	1656314
1399	26.4	4.2	2.5	chr17	64316753	64316898	(18940543)	+	MLT1C	LTR/ERVL-MaLR	6	158	(309)	1656315
2353	6.5	0.0	1.0	chr17	65372610	65372917	(17884524)	C	AluY	SINE/Alu	(0)	311	1	1658532
2645	5.1	0.0	1.0	chr17	68029145	68029458	(15227983)	+	AluY	SINE/Alu	1	311	(0)	1663369
1298	19.6	3.0	18.5	chr17	68029459	68029652	(15227789)	C	MSTB	LTR/ERVL-MaLR	(242)	184	1	1663367
1010	28.9	10.8	2.4	chr17	68029653	68029967	(15227474)	C	ERVL-E-int	LTR/ERVL	(2008)	3659	3300	1663366
259	24.5	14.3	5.9	chr17	68146643	68146849	(15110592)	+	L1ME3G	LINE/L1	618	807	(117)	1663621
1947	16.7	0.3	1.0	chr17	68146909	68147219	(15110222)	+	AluJb	SINE/Alu	1	309	(3)	1663622
2015	13.2	6.6	1.1	chr17	69932459	69932818	(13324623)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1666536
743	18.9	3.0	0.8	chr17	70072298	70072429	(13185012)	+	AluJo	SINE/Alu	2	136	(176)	1666759
1102	16.8	9.2	0.5	chr17	70704733	70704941	(12552500)	C	MSTA	LTR/ERVL-MaLR	(0)	428	200	1667679
994	20.1	2.1	0.0	chr17	70704942	70705130	(12552311)	+	LTR53	LTR/ERVL	320	512	(7)	1667680
2420	20.1	9.3	2.1	chr17	73145710	73146227	(10111214)	+	MER89	LTR/ERV1	1	559	(0)	1671737
1528	21.1	4.1	6.0	chr17	73146228	73146252	(10111189)	C	MLT1C	LTR/ERVL-MaLR	(359)	108	91	1671736
2024	11.9	2.4	2.4	chr17	73146253	73146576	(10110865)	C	AluSx1	SINE/Alu	(0)	312	2	1671738
285	26.5	13.6	2.9	chr17	76447992	76448096	(6809345)	C	MIR3	SINE/MIR	(60)	148	31	1678048
2359	8.8	0.0	0.7	chr17	76464800	76465096	(6792345)	C	AluSq2	SINE/Alu	(18)	295	1	1678087
2067	12.3	2.7	0.3	chr17	76465345	76465636	(6791805)	C	AluJr	SINE/Alu	(13)	299	1	1678088
2573	19.3	5.6	3.0	chr17	77027284	77027821	(6229620)	+	MLT1F1	LTR/ERVL-MaLR	17	569	(0)	1679271
2542	4.7	0.0	0.3	chr17	78293574	78293873	(4963568)	C	AluY	SINE/Alu	(12)	299	1	1681585
2156	10.3	0.0	4.5	chr17	78293874	78294019	(4963422)	C	AluSx	SINE/Alu	(170)	142	1	1681584
1903	31.4	8.5	4.9	chr17	78558837	78560236	(4697205)	+	L2a	LINE/L2	1974	3426	(0)	1682038
1204	17.2	18.3	4.4	chr17	80160436	80160954	(3096487)	C	LTR36	LTR/ERV1	(12)	599	6	1684561
1657	23.8	8.8	3.8	chr17	80160979	80161041	(3096400)	C	LTR49-int	LTR/ERV1	(3985)	2346	2287	1684552
1380	23.9	10.8	6.9	chr17	80161042	80161432	(3096009)	C	MER66D	LTR/ERV1	(0)	484	80	1684562
1870	17.1	0.0	3.2	chr17	80161433	80161772	(3095669)	C	AluJb	SINE/Alu	(0)	312	3	1684563
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
200	2.8	7.2	2.7	chr18	4510685	4511029	(75862256)	+	(GTG)n	Simple_repeat	1	370	(0)	1696090
306	31.5	13.8	5.6	chr18	5295087	5295338	(75077947)	C	L1M4b	LINE/L1	(6188)	679	404	1697043
378	32.4	9.6	2.2	chr18	10087876	10088058	(70285227)	+	MLT1H	LTR/ERVL-MaLR	27	224	(325)	1704112
316	19.7	20.6	2.7	chr18	10088098	10088294	(70284991)	+	MLT1H	LTR/ERVL-MaLR	225	545	(4)	1704112
1539	31.8	8.6	4.9	chr18	13518034	13519283	(66854002)	C	L1MEd	LINE/L1	(5792)	1294	3	1709182
25816	5.7	0.2	0.0	chr18	22885396	22891520	(57481765)	+	L1PA5	LINE/L1	11	6149	(5)	1715159
13	9.7	0.0	0.0	chr18	23453296	23453317	(56919968)	+	(CGC)n	Simple_repeat	1	22	(0)	1716229
2180	17.8	2.6	4.0	chr18	28207960	28208386	(52164899)	+	MSTB	LTR/ERVL-MaLR	1	421	(5)	1723460
1360	13.2	5.5	0.8	chr18	28208392	28208650	(52164635)	+	MSTB-int	LTR/ERVL-MaLR	1	272	(1379)	1723460
392	11.0	6.4	0.0	chr18	29995252	29995324	(50377961)	C	L1M1	LINE/L1	(3006)	3140	3063	1725741
743	12.2	1.8	0.0	chr18	29995331	29995437	(50377848)	C	AluSz6	SINE/Alu	(3)	309	201	1725742
4349	17.6	0.7	1.1	chr18	29995442	29996155	(50377130)	+	L1M1	LINE/L1	253	963	(6602)	1725740
2546	12.5	4.7	0.2	chr18	32428309	32428717	(47944568)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1729340
2384	19.7	1.6	3.7	chr18	34069679	34070029	(46303256)	+	MER89	LTR/ERV1	59	411	(148)	1731473
2502	5.5	0.0	0.0	chr18	34070030	34070318	(46302967)	C	AluYc	SINE/Alu	(10)	289	1	1731474
2384	19.7	1.6	3.7	chr18	34070319	34070478	(46302807)	+	MER89	LTR/ERV1	412	559	(0)	1731473
815	30.9	6.5	2.5	chr18	34070481	34070965	(46302320)	+	L1MEf	LINE/L1	1375	1880	(4362)	1731475
1154	23.0	10.2	4.0	chr18	35195187	35195608	(45177677)	C	MER65C	LTR/ERV1	(10)	451	1	1732981
487	8.8	0.0	0.0	chr18	35195609	35195688	(45177597)	C	MER2	DNA/TcMar-Tigger	(130)	215	136	1732979
1346	27.4	14.4	0.9	chr18	36328113	36329052	(44044233)	C	L2a	LINE/L2	(50)	3376	2264	1734649
12	7.2	6.5	3.0	chr18	36865876	36865906	(43507379)	+	(TCTGGC)n	Simple_repeat	1	33	(0)	1735311
2327	9.8	0.0	0.0	chr18	37300229	37300524	(43072761)	C	AluSx1	SINE/Alu	(16)	296	1	1735867
474	26.0	12.0	1.7	chr18	37418553	37418724	(42954561)	+	MIRc	SINE/MIR	19	210	(58)	1736024
3965	9.0	5.9	3.7	chr18	49808450	49809479	(30563806)	C	MER11A	LTR/ERVK	(0)	1266	1	1754243
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
2324	8.3	2.2	2.9	chr18	62449184	62449497	(17923788)	C	AluSx1	SINE/Alu	(0)	312	1	1773473
994	26.1	4.2	3.8	chr18	62449498	62449861	(17923424)	C	L1MEd	LINE/L1	(6138)	948	574	1773472
2660	13.3	3.4	1.4	chr18	62449992	62450424	(17922861)	C	MER65A	LTR/ERV1	(3)	442	1	1773474
234	29.1	6.0	2.6	chr18	65023964	65024076	(15349209)	C	MLT2F	LTR/ERVL	(544)	119	3	1777191
303	33.9	5.9	0.9	chr18	65024352	65024464	(15348821)	C	L1MEd	LINE/L1	(6705)	398	280	1777187
1920	12.2	4.9	0.0	chr18	65024493	65024763	(15348522)	+	AluSc	SINE/Alu	9	293	(16)	1777192
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
715	25.4	8.5	6.6	chr19	737491	738101	(57879515)	C	L2a	LINE/L2	(188)	3238	2592	1797493
1073	8.0	0.0	0.7	chr19	738109	738245	(57879371)	+	AluSz	SINE/Alu	1	136	(176)	1797494
1965	8.0	0.0	0.0	chr19	1142450	1142688	(57474928)	+	AluSx	SINE/Alu	53	291	(21)	1798282
219	32.8	0.0	0.0	chr19	2719719	2719782	(55897834)	+	MIR3	SINE/MIR	84	147	(61)	1801526
842	27.7	15.1	4.2	chr19	2983201	2983942	(55633674)	C	L2a	LINE/L2	(2)	3424	2570	1802087
2187	11.7	1.0	0.0	chr19	2984470	2984767	(55632849)	C	AluSx	SINE/Alu	(11)	301	1	1802088
519	23.1	1.7	1.7	chr19	3185311	3185429	(55432187)	C	L2a	LINE/L2	(0)	3426	3308	1802593
42	30.4	5.0	1.3	chr19	3366345	3366566	(55251050)	+	G-rich	Low_complexity	1	233	(0)	1803067
12	9.8	0.0	11.9	chr19	3366593	3366634	(55250982)	+	(GCCC)n	Simple_repeat	1	42	(0)	1803068
2406	9.1	0.0	0.3	chr19	3922735	3923043	(54694573)	C	AluY	SINE/Alu	(2)	309	2	1804353
689	28.2	14.5	2.0	chr19	3923094	3923393	(54694223)	+	L1MEd	LINE/L1	517	860	(6226)	1804354
431	21.8	0.7	0.3	chr19	3923404	3924316	(54693300)	+	(ATGG)n	Simple_repeat	1	919	(0)	1804355
2261	13.4	0.0	0.6	chr19	5403722	5404035	(53213581)	+	AluSx	SINE/Alu	1	312	(0)	1807888
16	3.2	5.6	5.3	chr19	5404039	5404104	(53213512)	+	(AAAGA)n	Simple_repeat	1	66	(0)	1807889
22	28.0	4.7	0.0	chr19	5404105	5404120	(53213496)	+	GA-rich	Low_complexity	4	89	(0)	1807890
910	11.9	0.0	0.0	chr19	5561597	5561714	(53055902)	C	AluSc	SINE/Alu	(6)	303	186	1808354
305	24.8	2.7	0.9	chr19	5561789	5561897	(53055719)	C	MIR3	SINE/MIR	(52)	156	47	1808355
1407	18.0	0.4	0.8	chr19	6929946	6930186	(51687430)	C	LTR9A1	LTR/ERV1	(488)	240	1	1811588
237	30.9	5.3	8.0	chr19	6930355	6930446	(51687170)	C	L1MEd	LINE/L1	(6320)	766	679	1811589
2343	11.7	1.9	10.1	chr19	6930447	6930635	(51686981)	C	L1MA3	LINE/L1	(0)	6305	6138	1811590
233	27.1	0.0	0.0	chr19	8881054	8881101	(49736515)	+	MER117	DNA/hAT-Charlie	114	161	(36)	1816308
291	27.3	15.4	1.6	chr19	9363738	9363983	(49253633)	C	L1MEd	LINE/L1	(1886)	4260	3975	1817312
817	15.0	7.0	0.6	chr19	9363985	9364145	(49253471)	C	L1MB7	LINE/L1	(9)	6175	6004	1817313
7697	7.8	1.3	0.1	chr19	9364148	9365239	(49252377)	C	HERVH-int	LTR/ERV1	(400)	7313	6209	1817314
1431	10.5	0.5	0.0	chr19	10570573	10570750	(48046866)	+	AluSc8	SINE/Alu	133	311	(0)	1820120
559	24.7	4.4	0.0	chr19	10570770	10570943	(48046673)	C	L2a	LINE/L2	(267)	3159	2978	1820122
1374	4.6	2.3	1.2	chr19	10570994	10571166	(48046450)	C	AluYk3	SINE/Alu	(1)	310	136	1820123
254	23.3	4.0	0.0	chr19	14005528	14005600	(44612016)	C	MIR1_Amn	SINE/MIR	(62)	168	93	1828310
23	5.8	2.8	0.0	chr19	16467517	16467553	(42150063)	+	(AAAAAC)n	Simple_repeat	1	38	(0)	1833990
403	31.2	3.8	0.0	chr19	16467805	16467932	(42149684)	+	MIRc	SINE/MIR	21	153	(115)	1833991
182	34.9	1.2	5.7	chr19	18941598	18941685	(39675931)	+	L2	LINE/L2	493	576	(2843)	1839876
183	20.0	2.8	0.0	chr19	18941735	18941769	(39675847)	+	L2b	LINE/L2	3324	3359	(16)	1839877
2204	10.9	0.7	1.0	chr19	19118447	19118748	(39498868)	C	AluSx	SINE/Alu	(11)	301	1	1840294
2013	13.1	2.2	2.9	chr19	19119141	19119452	(39498164)	C	AluSz	SINE/Alu	(2)	310	1	1840295
227	35.5	4.2	3.7	chr19	19214940	19215103	(39402513)	+	MIR3	SINE/MIR	3	167	(41)	1840517
44	18.2	3.2	0.0	chr19	28317481	28317573	(30300043)	+	(CA)n	Simple_repeat	1	96	(0)	1848576
2216	10.3	0.0	0.7	chr19	28317603	28317904	(30299712)	C	AluSx1	SINE/Alu	(2)	310	11	1848577
1451	20.1	3.9	2.8	chr19	31491970	31492328	(27125288)	C	MLT1A0	LTR/ERVL-MaLR	(2)	363	1	1853309
446	21.3	23.3	0.6	chr19	32337557	32337712	(26279904)	C	MIR	SINE/MIR	(14)	248	47	1854624
302	30.5	5.4	5.9	chr19	32337918	32338076	(26279540)	C	L2a	LINE/L2	(1)	3425	3215	1854625
2334	8.5	0.3	2.5	chr19	32569640	32569958	(26047658)	C	AluSx1	SINE/Alu	(0)	312	1	1855061
1913	8.9	1.5	2.6	chr19	33146048	33146318	(25471298)	+	AluSp	SINE/Alu	40	307	(6)	1856284
90	4.0	1.9	0.0	chr19	33146433	33146536	(25471080)	+	(TTCC)n	Simple_repeat	1	106	(0)	1856285
2069	10.7	2.4	0.0	chr19	33146537	33146816	(25470800)	C	AluSx	SINE/Alu	(24)	288	2	1856286
181	23.8	4.5	0.0	chr19	33374490	33374531	(25243085)	+	L2	LINE/L2	1258	1301	(2118)	1856708
264	34.4	8.1	4.7	chr19	35801628	35801926	(22815690)	+	L1MEd	LINE/L1	301	610	(6476)	1861172
348	21.2	1.5	0.0	chr19	35801967	35802032	(22815584)	+	L1MEd	LINE/L1	699	765	(6321)	1861172
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
1267	16.4	12.5	5.5	chr19	38861231	38861360	(19756256)	C	AluJr	SINE/Alu	(12)	300	140	1867603
125	4.2	5.6	6.2	chr19	38861361	38861665	(19755951)	+	(TA)n	Simple_repeat	1	322	(0)	1867604
9320	19.9	4.6	0.7	chr19	39562608	39563397	(19054219)	C	L1M1	LINE/L1	(5797)	1768	942	1869352
2703	23.8	4.5	3.0	chr19	39563418	39564105	(19053511)	C	L1M1	LINE/L1	(6853)	712	15	1869352
213	32.4	2.8	1.9	chr19	40433754	40433860	(18183756)	C	L2a	LINE/L2	(198)	3177	3070	1871042
15	14.7	0.0	0.0	chr19	40433948	40433977	(18183639)	+	(GGGA)n	Simple_repeat	1	30	(0)	1871050
17	23.1	0.0	0.0	chr19	40440867	40440902	(18176714)	+	A-rich	Low_complexity	1	36	(0)	1871072
11	17.4	0.0	5.6	chr19	43503931	43503966	(15113650)	+	(CTGCCT)n	Simple_repeat	1	36	(0)	1876955
950	30.0	6.7	0.8	chr19	43691838	43692190	(14925426)	+	L1MEd	LINE/L1	561	935	(6151)	1877446
1215	13.4	0.2	0.0	chr19	44410766	44412174	(14205442)	+	ACRO1	Satellite/acro	1	1411	(0)	1878697
2180	13.0	0.0	0.3	chr19	45378724	45379024	(13238592)	C	AluSq2	SINE/Alu	(13)	300	1	1881149
462	29.2	2.1	2.1	chr19	45379025	45379213	(13238403)	+	L1MEd	LINE/L1	690	878	(6208)	1881150
2211	11.8	2.5	0.3	chr19	45379237	45379542	(13238074)	+	AluSq2	SINE/Alu	1	313	(0)	1881151
2061	15.9	0.0	0.0	chr19	45390917	45391212	(13226404)	+	AluSz	SINE/Alu	2	297	(15)	1881181
27	13.1	5.4	5.1	chr19	45391213	45391270	(13226346)	+	GA-rich	Low_complexity	16	74	(0)	1881182
813	24.2	13.1	1.2	chr19	45391471	45391813	(13225803)	+	MLT1J	LTR/ERVL-MaLR	82	471	(41)	1881183
583	27.9	9.2	2.3	chr19	45571797	45572101	(13045515)	C	L1MEd	LINE/L1	(6055)	1031	704	1881669
22	13.0	0.0	0.0	chr19	45572102	45572135	(13045481)	+	(TA)n	Simple_repeat	1	34	(0)	1881670
475	2.0	0.0	0.0	chr19	45572136	45572186	(13045430)	C	AluSp	SINE/Alu	(181)	132	82	1881671
293	14.2	0.8	6.0	chr19	45572188	45572845	(13044771)	+	(AT)n	Simple_repeat	1	663	(0)	1881672
117	0.0	0.0	0.0	chr19	46389363	46389461	(12228155)	+	(AC)n	Simple_repeat	1	99	(0)	1883532
572	25.8	7.8	2.6	chr19	46389573	46389767	(12227849)	C	L1MC5	LINE/L1	(421)	8883	8678	1883530
12	29.1	0.0	6.9	chr19	46389807	46389878	(12227738)	+	(CCCTCC)n	Simple_repeat	1	72	(0)	1883533
18	21.3	3.2	3.1	chr19	46389909	46389971	(12227645)	+	(TCTCTG)n	Simple_repeat	1	65	(0)	1883534
839	24.7	17.6	5.6	chr19	46655093	46655329	(11962287)	+	L2a	LINE/L2	2968	3265	(161)	1884211
13	25.1	2.0	2.0	chr19	48715697	48715745	(9901871)	+	(GGCCGA)n	Simple_repeat	1	50	(0)	1889454
181	27.7	6.7	8.9	chr19	49404377	49404499	(9213117)	+	L2c	LINE/L2	3033	3152	(235)	1891042
258	23.5	20.9	1.0	chr19	49404662	49404764	(9212852)	+	MIRb	SINE/MIR	32	160	(108)	1891043
368	33.8	7.0	1.8	chr19	49422761	49422923	(9194693)	+	L2b	LINE/L2	3204	3375	(0)	1891074
12	17.0	2.9	2.8	chr19	49528017	49528051	(9089565)	+	(GCGGA)n	Simple_repeat	1	36	(0)	1891302
1204	30.4	8.1	1.7	chr19	49783866	49784145	(8833471)	+	L1MEd	LINE/L1	477	767	(6319)	1891937
2420	8.9	0.3	1.6	chr19	49784146	49784461	(8833155)	+	AluSx	SINE/Alu	1	312	(0)	1891938
335	28.7	3.8	12.9	chr19	50288646	50288877	(8328739)	C	L2b	LINE/L2	(70)	3305	3096	1893197
923	30.5	2.7	1.4	chr19	50288878	50289243	(8328373)	+	L1MEd	LINE/L1	460	830	(6256)	1893198
3706	4.8	1.9	5.2	chr19	52923622	52924121	(5693495)	+	LTR2B	LTR/ERV1	1	483	(0)	1898470
367	33.1	2.0	0.7	chr19	53915550	53915695	(4701921)	+	MIRb	SINE/MIR	46	193	(75)	1900569
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
816	15.7	0.0	0.0	chr19	57975130	57975244	(642372)	+	AluSx3	SINE/Alu	134	248	(63)	1908647
204	24.9	30.3	1.8	chr19	57975265	57975592	(642024)	C	L2	LINE/L2	(2886)	533	69	1908631
2025	13.3	0.3	1.3	chr19	58092772	58093072	(524544)	C	AluJr	SINE/Alu	(10)	302	5	1908855
180	32.2	7.2	3.2	chr2	487162	487254	(241706275)	C	L3	LINE/CR1	(998)	3101	3005	1911296
2567	3.0	0.0	0.0	chr2	3586757	3587056	(238606473)	+	AluY	SINE/Alu	1	300	(11)	1914700
482	23.8	11.3	4.1	chr2	3587057	3587147	(238606382)	+	Arthur1B	DNA/hAT-Tip100	151	260	(965)	1914699
916	16.1	4.4	0.6	chr2	3587148	3587322	(238606207)	C	MER20	DNA/hAT-Charlie	(1)	218	37	1914701
1666	15.3	6.5	3.1	chr2	5151784	5152107	(237041422)	C	MER1B	DNA/hAT-Charlie	(0)	339	4	1916699
4684	25.1	8.8	5.7	chr2	5152108	5153057	(237040472)	C	L1MB8	LINE/L1	(1617)	1822	867	1916697
2228	11.7	5.8	1.4	chr2	7800137	7800500	(234393029)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1920449
55	16.3	6.8	1.3	chr2	8681665	8681812	(233511717)	+	(CCCTCCT)n	Simple_repeat	1	158	(0)	1921728
581	30.9	8.8	2.2	chr2	9339279	9339500	(232854029)	+	MIRb	SINE/MIR	3	240	(28)	1922788
542	25.3	12.1	0.6	chr2	9860784	9860958	(232332571)	C	L2a	LINE/L2	(1429)	1990	1793	1923791
26798	4.6	0.3	0.1	chr2	9860963	9867093	(232326436)	+	L1PA4	LINE/L1	2	6149	(6)	1923797
1509	27.5	12.7	5.6	chr2	12290247	12291146	(229902383)	C	L1MEd	LINE/L1	(5393)	1693	698	1928056
270	35.3	7.3	1.6	chr2	12291369	12291624	(229901905)	C	L2	LINE/L2	(812)	2607	2336	1928058
472	28.1	3.7	1.9	chr2	18382241	18382450	(223811079)	+	L1MEd	LINE/L1	2138	2351	(3795)	1937375
694	34.1	3.1	2.2	chr2	18382453	18382896	(223810633)	+	L1MEc	LINE/L1	33	480	(5920)	1937376
453	25.2	8.9	1.4	chr2	23918847	23918991	(218274538)	+	MIRb	SINE/MIR	96	252	(16)	1945096
803	18.4	0.0	0.0	chr2	23919061	23919185	(218274344)	+	AluJr	SINE/Alu	1	125	(187)	1945097
1838	16.0	3.1	0.0	chr2	23919272	23919552	(218273977)	+	AluJb	SINE/Alu	1	290	(22)	1945098
844	30.9	9.9	3.1	chr2	24832814	24833730	(217359799)	+	L2a	LINE/L2	2586	3426	(0)	1946794
394	21.9	5.0	4.6	chr2	24833729	24833885	(217359644)	C	MIRc	SINE/MIR	(69)	199	39	1946795
476	26.0	24.5	1.8	chr2	28292478	28292801	(213900728)	C	MLT1L	LTR/ERVL-MaLR	(12)	598	201	1953319
1267	23.0	12.4	9.0	chr2	30711628	30712222	(211481307)	+	LTR41C	LTR/ERVL	1	623	(78)	1957451
14	16.9	6.2	2.0	chr2	31770630	31770677	(210422852)	+	(TATATCT)n	Simple_repeat	1	51	(0)	1958864
689	17.5	29.7	0.6	chr2	31770767	31770941	(210422588)	C	MER89	LTR/ERV1	(0)	559	334	1958865
389	21.9	12.3	8.6	chr2	31770930	31771069	(210422460)	C	MLT1C	LTR/ERVL-MaLR	(321)	146	1	1958866
359	20.0	3.1	0.0	chr2	31771071	31771165	(210422364)	+	L1MB8	LINE/L1	6079	6176	(2)	1958867
1734	16.8	2.8	3.1	chr2	32442871	32443196	(209750333)	C	MER44A	DNA/TcMar-Tigger	(4)	335	11	1960326
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
322	29.2	8.5	5.3	chr2	36611478	36611705	(205581824)	+	LTR78B	LTR/ERV1	468	703	(593)	1966246
1455	28.2	9.8	9.6	chr2	44909652	44910186	(197283343)	+	L1MEd	LINE/L1	342	922	(6181)	1979938
514	9.2	2.6	0.0	chr2	44910187	44910262	(197283267)	+	BC200	scRNA	2	79	(121)	1979942
1455	28.2	9.8	9.6	chr2	44910263	44910617	(197282912)	+	L1MEd	LINE/L1	923	1309	(5794)	1979938
16	18.9	0.0	0.0	chr2	47344983	47345018	(194848511)	+	A-rich	Low_complexity	1	36	(0)	1983862
2060	12.6	0.0	0.0	chr2	47729706	47729983	(194463546)	+	AluSx	SINE/Alu	7	284	(28)	1984663
32	0.0	0.0	0.0	chr2	47729984	47730013	(194463516)	+	(AAT)n	Simple_repeat	1	30	(0)	1984664
2086	25.4	5.1	4.8	chr2	47730014	47730348	(194463181)	C	LTR26	LTR/ERV1	(243)	360	2	1984662
2454	21.4	3.4	3.4	chr2	47730349	47730528	(194463001)	C	L1ME1	LINE/L1	(1306)	4840	4657	1984654
14	29.1	0.0	3.6	chr2	55903761	55903816	(186289713)	+	(ATAC)n	Simple_repeat	1	56	(0)	1996736
12	4.7	0.0	7.7	chr2	55904163	55904188	(186289341)	+	(GTG)n	Simple_repeat	1	26	(0)	1996737
3362	28.5	10.4	2.8	chr2	55944442	55946408	(186247121)	C	L1ME3A	LINE/L1	(4940)	2163	29	1996788
1027	38.8	2.4	0.2	chr2	56665759	56666213	(185527316)	+	MER115	DNA/hAT-Tip100	225	689	(4)	1997681
2496	7.7	0.0	0.0	chr2	61127991	61128289	(181065240)	+	AluSc8	SINE/Alu	1	299	(12)	2003718
4453	12.0	10.2	13.2	chr2	61128290	61128374	(181065155)	+	L1M4b	LINE/L1	2079	2158	(4709)	2003717
1768	15.5	0.0	4.0	chr2	61128375	61128497	(181065032)	+	AluJr	SINE/Alu	3	125	(187)	2003719
2317	9.8	0.0	0.3	chr2	61128498	61128793	(181064736)	C	AluSq	SINE/Alu	(18)	295	1	2003720
3503	26.8	7.9	2.7	chr2	63747119	63748633	(178444896)	C	L1MEd	LINE/L1	(809)	5337	3740	2008266
599	34.8	4.7	2.1	chr2	63748604	63749035	(178444494)	C	L1MEd	LINE/L1	(6181)	922	479	2008266
15	20.0	0.0	2.4	chr2	64875815	64875856	(177317673)	+	A-rich	Low_complexity	1	42	(0)	2010110
482	6.9	0.0	0.0	chr2	64875963	64876020	(177317509)	C	LSU-rRNA_Hsa	rRNA	(3069)	1966	1909	2010111
230	19.7	8.4	1.3	chr2	64876040	64876116	(177317413)	+	MER58C	DNA/hAT-Charlie	74	156	(59)	2010112
227	28.8	0.0	0.0	chr2	65281881	65281939	(176911590)	C	MER103C	DNA/hAT-Charlie	(133)	164	106	2010964
66	33.2	2.5	0.0	chr2	65281946	65282190	(176911339)	+	(TC)n	Simple_repeat	1	251	(0)	2010965
192	23.5	13.3	4.5	chr2	65282231	65282319	(176911210)	+	MIR3	SINE/MIR	43	140	(68)	2010966
1917	14.2	7.2	2.3	chr2	65470952	65471296	(176722233)	+	MLT1A0	LTR/ERVL-MaLR	3	365	(0)	2011322
1891	15.1	2.4	0.0	chr2	65471563	65471847	(176721682)	+	AluJr4	SINE/Alu	1	292	(20)	2011323
475	23.4	2.7	0.0	chr2	65472328	65472434	(176721095)	C	LTR37B	LTR/ERV1	(358)	110	1	2011326
411	20.8	5.3	7.4	chr2	65472595	65472729	(176720800)	C	MIRb	SINE/MIR	(21)	247	116	2011327
348	27.2	3.7	1.9	chr2	65472744	65472848	(176720681)	+	Charlie17a	DNA/hAT-Charlie	1	107	(110)	2011328
225	31.9	15.1	3.0	chr2	68206595	68206791	(173986738)	+	L2b	LINE/L2	3103	3330	(57)	2015234
406	26.0	6.6	0.8	chr2	68732699	68732826	(173460703)	+	MLT1H2	LTR/ERVL-MaLR	62	197	(292)	2016013
1418	17.0	3.2	9.6	chr2	70319067	70319357	(171874172)	C	MER89	LTR/ERV1	(1)	558	276	2018879
2129	13.5	0.0	0.0	chr2	70319358	70319660	(171873869)	+	AluSx1	SINE/Alu	1	303	(9)	2018880
1733	26.3	10.1	0.6	chr2	71629010	71629663	(170563866)	C	L1MEd	LINE/L1	(5854)	1422	700	2020935
464	26.3	5.9	1.1	chr2	71629663	71629839	(170563690)	C	L1MEd	LINE/L1	(6890)	386	201	2020935
836	25.9	12.2	7.1	chr2	72696406	72696894	(169496635)	+	MLT1H	LTR/ERVL-MaLR	13	489	(0)	2022399
1724	23.9	9.9	8.1	chr2	73152578	73153580	(169039949)	+	L1MC5a	LINE/L1	2033	2985	(6)	2023205
1360	30.1	6.3	2.1	chr2	75132281	75133084	(167060445)	C	L1MEd	LINE/L1	(1112)	1123	281	2026544
548	27.8	10.2	12.5	chr2	76088383	76088863	(166104666)	C	MLT1J	LTR/ERVL-MaLR	(41)	471	3	2027907
435	37.4	7.6	4.4	chr2	76943627	76944034	(165249495)	+	L2c	LINE/L2	2372	2793	(626)	2029002
469	32.3	13.2	4.8	chr2	76944095	76944530	(165248999)	+	L2c	LINE/L2	2910	3387	(0)	2029002
591	29.9	14.2	3.1	chr2	78941830	78942409	(163251120)	+	L1ME3D	LINE/L1	499	1153	(5950)	2031660
759	18.0	0.8	0.0	chr2	85564084	85564205	(156629324)	C	FLAM_C	SINE/Alu	(20)	123	1	2041037
1793	14.4	7.0	16.8	chr2	85564206	85564453	(156629076)	+	L1MC2	LINE/L1	5920	6174	(170)	2041036
2424	8.2	0.0	0.3	chr2	85564454	85564758	(156628771)	C	AluSq2	SINE/Alu	(8)	305	2	2041038
2329	10.3	0.0	1.3	chr2	85991739	85992049	(156201480)	C	AluSz	SINE/Alu	(5)	307	1	2041884
2358	10.0	0.0	0.0	chr2	85992304	85992602	(156200927)	+	AluSq2	SINE/Alu	1	299	(14)	2041885
2403	11.6	0.0	1.0	chr2	86692236	86692545	(155500984)	+	AluSx4	SINE/Alu	1	307	(3)	2043059
8999	23.6	5.0	4.1	chr2	86692546	86692619	(155500910)	+	L1ME1	LINE/L1	3787	3847	(2299)	2043058
1778	18.9	0.7	3.5	chr2	86692620	86692936	(155500593)	+	AluJb	SINE/Alu	1	308	(4)	2043060
8999	23.6	5.0	4.1	chr2	86692937	86694379	(155499150)	+	L1ME1	LINE/L1	3848	5305	(841)	2043058
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
53	29.8	2.6	0.5	chr2	96971180	96971369	(145222160)	+	(TCTC)n	Simple_repeat	1	195	(0)	2053094
3434	18.8	3.1	6.8	chr2	98976971	98977853	(143215676)	+	L1M4b	LINE/L1	3124	3967	(3039)	2055735
24897	4.9	0.3	0.8	chr2	98977836	98984013	(143209516)	+	L1PA4	LINE/L1	5	6149	(6)	2055739
255	28.9	15.6	3.4	chr2	100339501	100339618	(141853911)	+	L2b	LINE/L2	3238	3372	(3)	2057740
1107	24.9	5.2	4.7	chr2	100465696	100466100	(141727429)	C	MER74B	LTR/ERVL	(138)	484	78	2057919
11	24.1	0.0	0.0	chr2	104055140	104055173	(138138356)	+	GA-rich	Low_complexity	1	34	(0)	2063015
26	22.2	0.0	0.0	chr2	104055175	104055228	(138138301)	+	(CA)n	Simple_repeat	1	54	(0)	2063016
33	31.6	1.5	0.8	chr2	104854134	104854263	(137339266)	+	GA-rich	Low_complexity	1	132	(0)	2064065
1574	15.4	0.8	1.5	chr2	106892776	106893045	(135300484)	+	MER89	LTR/ERV1	292	559	(0)	2067138
1093	18.2	0.8	2.8	chr2	108117565	108117731	(134075798)	+	L1MB7	LINE/L1	5926	6091	(87)	2068807
1984	22.7	11.1	0.4	chr2	108117732	108118230	(134075299)	C	MER89	LTR/ERV1	(0)	559	1	2068808
431	27.3	4.8	0.7	chr2	111633596	111633735	(130559794)	+	LTR78B	LTR/ERV1	697	842	(454)	2073790
1348	19.6	2.7	2.0	chr2	113583264	113583560	(128609969)	C	L1MB3	LINE/L1	(2)	6181	5883	2077015
13	15.4	2.5	4.9	chr2	113583676	113583715	(128609814)	+	G-rich	Low_complexity	1	41	(0)	2077016
746	23.4	12.7	3.8	chr2	113904462	113904883	(128288646)	C	L1M5	LINE/L1	(384)	5794	5312	2077604
12	9.5	0.0	4.0	chr2	113904885	113904909	(128288620)	+	(TTCC)n	Simple_repeat	1	25	(0)	2077605
261	32.5	10.6	1.7	chr2	115822870	115823220	(126370309)	C	L1MEd	LINE/L1	(6062)	1041	656	2080309
1175	33.4	4.7	5.1	chr2	127578414	127579281	(114614248)	+	L1MEg	LINE/L1	400	1264	(4978)	2097691
1603	19.3	0.0	0.0	chr2	132688742	132689005	(109504524)	+	AluJb	SINE/Alu	39	302	(10)	2104927
19749	15.8	2.2	1.2	chr2	133031032	133032686	(109160843)	+	L1MA1	LINE/L1	21	1677	(5888)	2105410
1962	14.3	11.9	2.6	chr2	133032687	133033073	(109160456)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2105411
4763	7.1	2.6	1.5	chr2	135177139	135178156	(107015373)	C	MER11A	LTR/ERVK	(0)	1266	2	2108572
20912	13.6	3.5	1.1	chr2	146699532	146704310	(95489219)	+	L1MA1	LINE/L1	16	4928	(2637)	2124233
60	11.1	2.6	2.6	chr2	148805626	148805785	(93387744)	+	(CCT)n	Simple_repeat	1	160	(0)	2127163
2419	21.2	9.5	10.6	chr2	148805787	148805874	(93387655)	C	L1M4	LINE/L1	(5930)	1690	1602	2127164
2480	15.9	2.8	0.5	chr2	148805875	148806292	(93387237)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2127165
2419	21.2	9.5	10.6	chr2	148806293	148806420	(93387109)	C	L1M4	LINE/L1	(6019)	1601	1484	2127164
1018	24.8	5.7	6.8	chr2	151388700	151389143	(90804386)	+	L2a	LINE/L2	2855	3286	(140)	2130801
3562	14.3	0.8	0.2	chr2	155330528	155331114	(86862415)	+	L1PA10	LINE/L1	1436	2026	(4327)	2136062
2241	4.2	0.0	5.2	chr2	155331115	155331419	(86862110)	C	L1PA4	LINE/L1	(0)	6155	5867	2136063
814	31.1	24.0	3.1	chr2	157000989	157001795	(85191734)	C	L2a	LINE/L2	(1)	3425	2437	2138179
364	33.2	5.4	2.2	chr2	157001899	157002199	(85191330)	C	L1MEg	LINE/L1	(6249)	837	522	2138180
331	26.8	7.4	6.1	chr2	157534643	157534789	(84658740)	+	L1ME3E	LINE/L1	98	246	(6857)	2138860
1861	14.6	4.7	0.7	chr2	157534875	157535162	(84658367)	+	AluJr	SINE/Alu	2	301	(11)	2138861
303	27.7	6.3	0.6	chr2	157535310	157535487	(84658042)	+	L1ME3E	LINE/L1	702	890	(6213)	2138860
1864	24.2	10.6	2.2	chr2	159270172	159271605	(82921924)	+	L1ME3B	LINE/L1	4407	6069	(104)	2141348
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
619	18.6	0.5	0.0	chr2	161281902	161282139	(80911390)	+	ACRO1	Satellite/acro	1	239	(5)	2144211
1383	11.7	2.0	2.4	chr2	161282665	161282869	(80910660)	+	AluSx1	SINE/Alu	106	309	(3)	2144212
2383	12.9	0.3	0.0	chr2	162089063	162089364	(80104165)	C	AluSx1	SINE/Alu	(9)	303	1	2145215
484	19.1	0.0	0.0	chr2	162089386	162089474	(80104055)	+	MER89	LTR/ERV1	1	89	(470)	2145216
1334	21.1	4.5	0.0	chr2	162089491	162089769	(80103760)	+	MER89	LTR/ERV1	268	559	(0)	2145216
401	30.3	6.2	0.0	chr2	168225921	168226072	(73967457)	+	MLT1M	LTR/ERVL-MaLR	242	403	(269)	2153246
30	27.3	1.9	3.8	chr2	169363051	169363176	(72830353)	+	A-rich	Low_complexity	1	123	(0)	2154845
15	22.4	4.2	0.0	chr2	169363150	169363197	(72830332)	+	GA-rich	Low_complexity	1	50	(0)	2154846
12589	15.9	3.2	2.2	chr2	174892589	174894760	(67298769)	+	L1MB2	LINE/L1	3846	6019	(385)	2163962
2342	16.6	15.7	6.0	chr2	175062734	175063283	(67130246)	C	LTR18B	LTR/ERVL	(0)	614	2	2164260
1500	28.9	8.8	4.6	chr2	176252893	176253532	(65939997)	+	L1MEd	LINE/L1	158	837	(6266)	2165848
2479	8.1	0.0	0.0	chr2	176253533	176253828	(65939701)	C	AluSq2	SINE/Alu	(17)	296	1	2165849
911	29.1	7.7	5.2	chr2	180177776	180178268	(62015261)	+	MLT1H1	LTR/ERVL-MaLR	1	579	(0)	2171160
1785	20.6	3.0	0.3	chr2	188078229	188078579	(54114950)	+	MER89	LTR/ERV1	199	559	(0)	2181184
797	21.6	4.3	0.0	chr2	191545211	191545386	(50648143)	+	MER5A	DNA/hAT-Charlie	6	189	(0)	2186023
1258	28.1	10.3	9.6	chr2	197150596	197151409	(45042120)	+	L1MEd	LINE/L1	33	853	(6233)	2193467
969	22.2	1.9	1.5	chr2	201245541	201245671	(40947858)	C	MER76-int	LTR/ERVL	(5139)	1050	921	2199818
858	23.1	2.8	7.5	chr2	201245796	201245857	(40947672)	C	L1MDa	LINE/L1	(6299)	334	280	2199820
2521	6.9	1.3	0.0	chr2	201245858	201246163	(40947366)	C	AluSp	SINE/Alu	(3)	310	1	2199821
12	17.6	5.0	2.4	chr2	201794202	201794241	(40399288)	+	(TTTC)n	Simple_repeat	1	42	(0)	2200592
245	29.4	1.3	0.0	chr2	201794354	201794450	(40399079)	C	Tigger16a	DNA/TcMar-Tigger	(34)	899	800	2200593
2072	16.8	2.3	5.7	chr2	202931272	202931500	(39262029)	+	Tigger2a	DNA/TcMar-Tigger	204	434	(0)	2202960
9243	16.8	9.9	0.7	chr2	202931501	202931888	(39261641)	C	L1M2a	LINE/L1	(5133)	2035	1537	2202958
2209	13.3	0.0	0.9	chr2	203301912	203302226	(38891303)	C	AluSz	SINE/Alu	(0)	312	1	2203725
1625	19.4	0.3	1.4	chr2	203302249	203302537	(38890992)	+	AluJb	SINE/Alu	1	286	(26)	2203726
15	21.7	7.3	1.7	chr2	203302545	203302599	(38890930)	+	(AT)n	Simple_repeat	1	59	(0)	2203727
2073	14.3	1.0	0.0	chr2	203302691	203302990	(38890539)	C	AluSg	SINE/Alu	(7)	303	1	2203728
1342	25.4	13.4	2.2	chr2	208430865	208431359	(33762170)	C	L1MEd	LINE/L1	(5728)	1548	977	2211848
237	29.6	0.0	0.0	chr2	208431480	208431533	(33761996)	+	MERX	DNA/TcMar-Tigger	307	360	(396)	2211852
386	34.0	11.0	7.1	chr2	208431559	208432021	(33761508)	C	L1MEd	LINE/L1	(6601)	675	193	2211848
4584	16.9	5.6	5.3	chr2	211306284	211306748	(30886781)	+	L1MC3	LINE/L1	7288	7778	(7)	2215419
243	32.9	0.0	0.0	chr2	211306920	211306989	(30886540)	+	MIR	SINE/MIR	193	262	(0)	2215421
2092	31.2	9.8	3.9	chr2	211307133	211308352	(30885177)	C	ERVL-E-int	LTR/ERVL	(3619)	2048	750	2215422
2109	29.7	8.1	4.4	chr2	218837164	218838850	(23354679)	+	L1ME3A	LINE/L1	174	1923	(4319)	2226897
2490	10.3	0.7	0.0	chr2	222947269	222947578	(19245951)	C	AluSx1	SINE/Alu	(0)	312	1	2233481
2254	9.2	1.4	0.0	chr2	224858377	224858659	(17334870)	+	AluSg	SINE/Alu	1	287	(23)	2236658
550	19.4	8.9	8.9	chr2	227206373	227206395	(14987134)	C	MER5B	DNA/hAT-Charlie	(139)	39	21	2240070
620	21.9	1.3	4.4	chr2	227206581	227206738	(14986791)	+	MER5A1	DNA/hAT-Charlie	10	162	(4)	2240072
425	26.4	12.9	5.2	chr2	227206800	227206991	(14986538)	C	MIRb	SINE/MIR	(58)	210	2	2240073
232	25.9	8.1	6.5	chr2	231940806	231940974	(10252555)	+	LTR104_Mam	LTR/Gypsy	746	917	(592)	2247930
192	32.8	0.0	0.0	chr2	232076287	232076344	(10117185)	+	MIRb	SINE/MIR	5	62	(206)	2248147
1061	21.5	8.3	1.1	chr2	232076367	232076800	(10116729)	C	L1M5	LINE/L1	(664)	5578	5077	2248148
1785	16.2	0.0	4.5	chr2	235879648	235879961	(6313568)	+	AluJo	SINE/Alu	6	305	(7)	2254217
16	15.8	10.8	2.4	chr2	236402367	236402440	(5791089)	+	(TTTCAGC)n	Simple_repeat	1	82	(0)	2254954
2807	29.1	9.5	4.1	chr2	238749793	238751545	(3441984)	+	L1MEd	LINE/L1	68	1925	(5178)	2258193
1382	27.0	7.9	8.5	chr2	239409136	239409875	(2783654)	+	L1ME1	LINE/L1	365	1099	(6004)	2258878
2360	10.0	0.0	0.0	chr2	240927651	240927949	(1265580)	C	AluSx	SINE/Alu	(12)	300	2	2260519
1326	31.9	7.2	3.4	chr2	240927950	240928315	(1265214)	C	L1MEd	LINE/L1	(6208)	878	514	2260518
349	34.2	1.3	1.1	chr20	1688169	1688354	(62755813)	C	MIR	SINE/MIR	(0)	268	79	2265420
2414	7.6	0.3	0.0	chr20	3528089	3528378	(60915789)	+	AluSg7	SINE/Alu	1	291	(18)	2269049
2097	13.3	7.8	0.3	chr20	3528379	3528733	(60915434)	+	L1PA15	LINE/L1	5777	6160	(5)	2269050
1957	24.3	10.8	3.5	chr20	3528734	3528811	(60915356)	+	L1ME2	LINE/L1	5324	5397	(767)	2269046
1941	16.3	0.0	2.3	chr20	4943386	4943691	(59500476)	+	AluJb	SINE/Alu	1	299	(13)	2271605
563	29.0	7.9	2.9	chr20	4943703	4944069	(59500098)	+	L1ME2	LINE/L1	5672	6070	(103)	2271594
5825	24.7	6.6	2.3	chr20	8172663	8174766	(56269401)	+	L1MD2	LINE/L1	138	2341	(4292)	2276853
13	16.5	0.0	0.0	chr20	18611841	18611867	(45832300)	+	(TTA)n	Simple_repeat	1	27	(0)	2292974
181	31.6	6.0	1.2	chr20	20713476	20713555	(43730612)	C	MIRb	SINE/MIR	(163)	105	22	2295952
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
8063	19.7	6.6	2.5	chr20	28563436	28564716	(35879451)	C	LTR53-int	LTR/ERVL	(127)	3202	1859	2303595
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
40	30.7	2.7	2.1	chr20	30815139	30815324	(33628843)	+	GA-rich	Low_complexity	1	191	(0)	2305476
636	34.9	6.8	8.7	chr20	31374448	31375137	(33069030)	C	L1MEd	LINE/L1	(6261)	825	157	2305805
17	13.3	7.8	1.8	chr20	31869841	31869891	(32574276)	+	GA-rich	Low_complexity	1	55	(0)	2307057
1336	16.0	9.7	5.1	chr20	33422498	33422772	(31021395)	+	AluJb	SINE/Alu	1	289	(23)	2310674
497	27.5	8.3	2.9	chr20	33422872	33423111	(31021056)	+	L2b	LINE/L2	3112	3365	(10)	2310675
17	15.8	2.3	2.2	chr20	36051058	36051101	(28393066)	+	(GGAGTGG)n	Simple_repeat	1	45	(0)	2316726
996	25.4	13.8	2.6	chr20	36051234	36051650	(28392517)	C	L2a	LINE/L2	(0)	3426	2956	2316727
481	23.0	10.3	0.7	chr20	37474108	37474247	(26969920)	+	L1ME4b	LINE/L1	726	880	(12)	2320107
184	19.2	16.1	0.0	chr20	38233508	38233559	(26210608)	C	MIR1_Amn	SINE/MIR	(81)	149	88	2321694
2172	13.6	7.4	1.6	chr20	38233810	38234176	(26209991)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	2321695
279	30.1	7.8	2.1	chr20	43883496	43883688	(20560479)	+	L1MEd	LINE/L1	2387	2591	(3555)	2332185
2874	23.5	4.6	4.2	chr20	43883703	43883938	(20560229)	C	HAL1	LINE/L1	(1063)	1444	1192	2332187
26	0.0	3.5	0.0	chr20	43883939	43883967	(20560200)	+	(GTTTT)n	Simple_repeat	1	30	(0)	2332188
2874	23.5	4.6	4.2	chr20	43883968	43884246	(20559921)	C	HAL1	LINE/L1	(1316)	1191	918	2332187
662	27.5	8.6	1.7	chr20	49560547	49561028	(14883139)	C	L2a	LINE/L2	(197)	3229	2695	2344731
238	35.4	9.7	5.0	chr20	52753737	52754275	(11689892)	+	L1MEd	LINE/L1	251	817	(6269)	2352135
1631	24.4	9.5	2.8	chr20	52754416	52754885	(11689282)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	61	2352136
523	22.6	1.5	6.6	chr20	57892190	57892326	(6551841)	C	FLAM_C	SINE/Alu	(11)	132	3	2362003
1168	22.2	5.6	6.2	chr20	57892327	57892394	(6551773)	C	MLT2B4	LTR/ERVL	(482)	74	8	2362002
3443	14.8	2.1	0.0	chr20	60138573	60139132	(4305035)	C	LTR43B	LTR/ERV1	(0)	572	1	2365547
5846	16.8	2.1	1.5	chr20	60419733	60420754	(4023413)	C	L1PB3	LINE/L1	(5100)	1835	714	2365956
1236	30.3	1.3	3.2	chr20	60420721	60421184	(4022983)	C	L1PBa	LINE/L1	(5224)	1639	1185	2365960
240	28.6	0.0	1.4	chr20	62120584	62120654	(2323513)	+	MIRb	SINE/MIR	106	175	(93)	2368173
8206	5.6	1.7	0.1	chr20	62873549	62874539	(1569628)	+	LTR13	LTR/ERVK	1	1007	(0)	2369061
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
1247	22.8	0.6	0.2	chr21	8232546	8235312	(38474671)	+	(TCTC)n	Simple_repeat	1	2784	(0)	2373335
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8464121	8465014	(38244969)	+	(CTCT)n	Simple_repeat	1	897	(0)	2373686
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
381	17.5	1.6	0.0	chr21	9248617	9248679	(37461304)	+	AluYj4	SINE/Alu	224	287	(24)	2374342
355	21.0	6.9	0.0	chr21	9257924	9258004	(37451979)	+	MER21C	LTR/ERVL	30	116	(822)	2374357
490	25.4	1.5	5.0	chr21	9258040	9258180	(37451803)	+	MER21C	LTR/ERVL	99	234	(634)	2374357
1574	22.3	7.7	4.1	chr21	9258166	9258605	(37451378)	+	MER21C	LTR/ERVL	457	913	(25)	2374357
1683	29.2	6.3	6.8	chr21	9810881	9812152	(36897831)	C	SST1	Satellite/centr	(14)	1549	284	2374881
19	33.9	0.0	1.2	chr21	9812172	9812228	(36897755)	+	(GACA)n	Simple_repeat	1	86	(0)	2374882
18	10.4	0.0	0.0	chr21	9812229	9812259	(36897724)	+	(ACACAC)n	Simple_repeat	1	31	(0)	2374883
1892	29.2	5.1	6.4	chr21	9812264	9813560	(36896423)	C	SST1	Satellite/centr	(1)	1562	284	2374884
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
23	9.8	0.0	0.0	chr21	9823504	9823536	(36886447)	+	(AC)n	Simple_repeat	1	33	(0)	2374907
1930	29.2	5.4	6.1	chr21	9823541	9824851	(36885132)	C	SST1	Satellite/centr	(1)	1562	262	2374908
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
471	27.5	6.0	1.2	chr21	10330456	10330628	(36379355)	C	ERVL-E-int	LTR/ERVL	(648)	5019	4838	2375365
2550	22.2	7.3	5.9	chr21	10437796	10437925	(36272058)	C	Charlie1a	DNA/hAT-Charlie	(562)	893	773	2375560
1864	12.6	7.4	0.0	chr21	10437926	10438202	(36271781)	C	AluSz	SINE/Alu	(3)	309	11	2375563
15821	15.7	5.1	4.5	chr21	15895685	15899136	(30810847)	+	L1MA2	LINE/L1	342	4170	(3392)	2379766
577	23.9	2.2	0.0	chr21	22731899	22732032	(23977951)	C	MER89	LTR/ERV1	(52)	507	371	2388709
1118	24.4	2.7	0.3	chr21	22732036	22732327	(23977656)	C	MER89	LTR/ERV1	(0)	559	261	2388710
1593	23.0	2.5	3.3	chr21	24284567	24284880	(22425103)	C	MER89	LTR/ERV1	(0)	559	244	2390904
2195	13.4	0.0	0.0	chr21	24284881	24285186	(22424797)	+	AluSp	SINE/Alu	1	306	(7)	2390905
385	25.4	26.8	2.6	chr21	28991945	28992380	(17717603)	C	L2a	LINE/L2	(6)	3420	2818	2397560
2622	16.3	7.9	2.1	chr21	29379406	29379931	(17330052)	+	MER89	LTR/ERV1	1	559	(0)	2398213
2260	13.6	4.1	5.3	chr21	32009745	32010139	(14699844)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	2402491
1728	20.6	5.1	2.1	chr21	32010154	32010376	(14699607)	C	MER89	LTR/ERV1	(0)	559	337	2402492
2544	15.1	5.4	0.5	chr21	32010377	32010783	(14699200)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2402493
21	13.5	0.0	0.0	chr21	33931952	33931984	(12777999)	+	(A)n	Simple_repeat	1	33	(0)	2405836
2338	9.5	0.7	0.0	chr21	34214753	34215048	(12494935)	C	AluSx1	SINE/Alu	(14)	298	1	2406284
996	29.3	6.7	8.3	chr21	34215049	34215563	(12494420)	C	L1MEd	LINE/L1	(6223)	880	385	2406281
2130	11.9	1.3	0.0	chr21	37579027	37579320	(9130663)	C	AluSc	SINE/Alu	(10)	299	2	2411823
1274	28.2	4.6	5.9	chr21	37579321	37579542	(9130441)	C	L1MEf	LINE/L1	(5480)	1557	1119	2411822
674	21.2	1.4	2.7	chr21	37667693	37667842	(9042141)	C	MER20	DNA/hAT-Charlie	(71)	148	1	2411944
322	24.3	1.8	5.3	chr21	38293324	38293436	(8416547)	C	MLT1I	LTR/ERVL-MaLR	(268)	143	35	2412841
2009	29.3	10.1	3.9	chr21	45249994	45251501	(1458482)	C	L1MEd	LINE/L1	(5193)	1893	220	2422683
806	14.8	0.8	0.0	chr21	45641629	45641750	(1068233)	C	FLAM_C	SINE/Alu	(20)	123	1	2423028
3076	15.8	1.1	0.9	chr22	10721335	10730387	(40088081)	+	(TCCATTCCAT)n	Simple_repeat	1	9151	(0)	2424547
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
1118	10.7	0.3	0.1	chr22	11814559	11816405	(39002063)	C	ACRO1	Satellite/acro	(55)	1851	1	2425389
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1249	21.0	6.5	1.2	chr22	11896731	11897053	(38921415)	C	L1MB8	LINE/L1	(5)	6173	5833	2425507
2301	14.0	7.0	0.5	chr22	11897054	11897465	(38921003)	C	MER61C	LTR/ERV1	(0)	428	4	2425508
2418	19.8	5.0	4.4	chr22	11897468	11898516	(38919952)	C	L1MB8	LINE/L1	(342)	5836	4777	2425507
4350	21.7	5.9	6.8	chr22	12123513	12123579	(38694889)	C	L1MB2	LINE/L1	(1768)	4372	4363	2425703
1977	15.7	0.0	4.9	chr22	12123580	12123903	(38694565)	C	AluSx1	SINE/Alu	(4)	308	1	2425706
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
3245	10.9	5.1	2.6	chr22	16562712	16568485	(34249983)	+	(CAAGCCAGC)n	Simple_repeat	4	6010	(0)	2427524
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
12	13.9	0.0	8.1	chr22	19122076	19122112	(31696356)	+	(CCCCG)n	Simple_repeat	1	37	(0)	2431479
19	18.5	6.3	1.5	chr22	19122417	19122479	(31695989)	+	(GCCGC)n	Simple_repeat	1	67	(0)	2431480
2162	9.6	4.6	0.0	chr22	20033924	20034215	(30784253)	+	AluSp	SINE/Alu	1	306	(7)	2432818
350	32.2	10.3	4.9	chr22	20034216	20034501	(30783967)	C	L1MEg	LINE/L1	(5303)	781	474	2432817
19	11.6	0.0	0.0	chr22	21017720	21017748	(29800720)	+	(AC)n	Simple_repeat	1	29	(0)	2434403
532	30.8	1.7	1.7	chr22	21018167	21018341	(29800127)	C	MIRb	SINE/MIR	(24)	244	70	2434404
559	30.2	1.7	1.7	chr22	21042065	21042236	(29776232)	+	MIRb	SINE/MIR	73	244	(24)	2434445
3770	10.0	1.5	2.7	chr22	22458902	22459455	(28359013)	+	LTR10B1	LTR/ERV1	1	547	(0)	2436870
1094	17.7	5.1	2.4	chr22	24502894	24503102	(26315366)	C	AluJr	SINE/Alu	(12)	300	86	2440155
3411	24.5	9.0	0.4	chr22	24503111	24503446	(26315022)	C	HAL1	LINE/L1	(423)	2084	1700	2440154
4984	13.5	2.6	0.9	chr22	24503447	24504225	(26314243)	+	MER54B	LTR/ERVL	1	793	(0)	2440156
201	24.4	3.7	2.5	chr22	25133986	25134065	(25684403)	C	MIR3	SINE/MIR	(47)	161	81	2441562
16	5.3	0.0	0.0	chr22	25134374	25134393	(25684075)	+	(GT)n	Simple_repeat	1	20	(0)	2441566
2235	12.1	1.3	0.0	chr22	25333317	25333623	(25484845)	C	AluSx	SINE/Alu	(0)	312	2	2442016
2197	9.2	0.0	2.0	chr22	25399480	25399784	(25418684)	+	AluY	SINE/Alu	1	299	(12)	2442120
478	33.5	2.3	3.6	chr22	28488720	28488942	(22329526)	+	L1MEd	LINE/L1	561	780	(6306)	2448582
1965	16.6	0.0	1.3	chr22	28489002	28489315	(22329153)	+	AluJr	SINE/Alu	1	310	(2)	2448583
17	8.8	0.0	0.0	chr22	28903233	28903256	(21915212)	+	(CA)n	Simple_repeat	1	24	(0)	2449533
10421	9.4	1.3	0.9	chr22	32704054	32706269	(18112199)	C	L1PREC2	LINE/L1	(0)	6160	3943	2457540
1066	28.5	0.6	0.6	chr22	32706262	32706582	(18111886)	+	L1MEc	LINE/L1	1480	1800	(4615)	2457537
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
1092	27.8	7.8	1.0	chr22	33377725	33378204	(17440264)	C	L1MEd	LINE/L1	(5981)	1105	591	2458934
16	22.1	2.1	0.0	chr22	33816241	33816270	(17002198)	+	(GCAG)n	Simple_repeat	1	30	(0)	2459831
1873	19.0	4.4	0.3	chr22	33816271	33816618	(17001850)	C	MLT1A0	LTR/ERVL-MaLR	(2)	363	1	2459832
16	22.1	2.1	0.0	chr22	33816619	33816635	(17001833)	+	(GCAG)n	Simple_repeat	3	20	(0)	2459833
257	15.6	0.0	0.0	chr22	33816644	33816688	(17001780)	C	HAL1b	LINE/L1	(178)	2243	2199	2459834
56	1.6	0.0	5.5	chr22	33816690	33816762	(17001706)	+	(AGAC)n	Simple_repeat	1	73	(0)	2459835
13	18.0	0.0	2.9	chr22	35767211	35767244	(15051224)	+	A-rich	Low_complexity	1	34	(0)	2463699
1223	25.4	2.4	0.3	chr22	36535168	36535542	(14282926)	C	L1MEd	LINE/L1	(6041)	1045	663	2465277
812	22.3	0.5	6.9	chr22	36535553	36535629	(14282839)	+	MER5A	DNA/hAT-Charlie	1	77	(112)	2465278
2163	9.2	2.0	0.0	chr22	36535630	36535922	(14282546)	+	AluSg	SINE/Alu	1	299	(11)	2465279
453	20.5	3.5	1.8	chr22	36902066	36902179	(13916289)	C	MLT1L	LTR/ERVL-MaLR	(376)	234	119	2466091
380	25.6	0.0	0.8	chr22	36902249	36902370	(13916098)	C	L1MEd	LINE/L1	(6265)	821	701	2466092
294	33.3	4.5	0.7	chr22	36902452	36902602	(13915866)	+	LTR101_Mam	LTR/ERVL	496	652	(177)	2466093
863	16.3	1.3	5.0	chr22	36978441	36978601	(13839867)	C	MER45A	DNA/hAT-Tip100	(19)	159	5	2466233
1423	19.6	3.3	1.2	chr22	37113519	37113848	(13704620)	+	MLT1C	LTR/ERVL-MaLR	131	467	(0)	2466535
410	28.5	6.2	5.0	chr22	37114169	37114327	(13704141)	+	L2a	LINE/L2	3266	3426	(0)	2466536
16	36.3	1.1	3.2	chr22	38455693	38455785	(12362683)	+	(CT)n	Simple_repeat	1	94	(0)	2469533
15	18.1	3.1	7.5	chr22	38455805	38455879	(12362589)	+	(CGGCCC)n	Simple_repeat	1	71	(0)	2469534
14	23.1	0.0	6.9	chr22	38455963	38456020	(12362448)	+	(CCGC)n	Simple_repeat	1	58	(0)	2469535
356	34.3	16.3	4.1	chr22	39739319	39739564	(11078904)	+	L1MEd	LINE/L1	478	759	(6327)	2472247
367	20.7	7.2	7.2	chr22	39739652	39739718	(11078750)	+	L1M5	LINE/L1	2906	2968	(3178)	2472248
3458	14.9	5.8	0.7	chr22	39739719	39740307	(11078161)	+	L1MB7	LINE/L1	5549	6169	(15)	2472249
2441	8.2	0.3	0.0	chr22	40747848	40748150	(10070318)	C	AluSp	SINE/Alu	(9)	304	1	2474264
2270	18.1	7.0	8.2	chr22	40748151	40748191	(10070277)	C	MER21B	LTR/ERVL	(552)	316	275	2474262
3940	11.4	3.1	1.6	chr22	40748192	40748225	(10070243)	+	LTR24C	LTR/ERV1	1	30	(605)	2474265
4881	19.2	3.3	5.4	chr22	40748226	40749325	(10069143)	+	LTR27E	LTR/ERV1	1	1077	(0)	2474266
2103	14.7	0.7	1.6	chr22	40784492	40784805	(10033663)	+	AluJr	SINE/Alu	2	312	(0)	2474345
1710	13.9	12.2	3.1	chr22	40784825	40785101	(10033367)	+	MER57B2	LTR/ERV1	52	371	(32)	2474346
20	19.4	1.2	8.3	chr22	41381289	41381371	(9437097)	+	(CCCGC)n	Simple_repeat	1	84	(0)	2475778
7682	18.6	9.9	2.3	chr22	42032932	42034227	(8784241)	C	MER52A	LTR/ERV1	(0)	1755	316	2477304
2211	10.3	2.2	1.9	chr22	43034270	43034403	(7784065)	+	AluSz	SINE/Alu	2	134	(178)	2479426
455	18.8	2.0	4.0	chr22	44192922	44193021	(6625447)	C	MLT1F1	LTR/ERVL-MaLR	(108)	461	364	2481518
273	31.6	1.7	2.6	chr22	44446458	44446574	(6371894)	+	L1MEd	LINE/L1	452	567	(6519)	2481969
898	26.0	0.4	2.1	chr22	44446650	44446860	(6371608)	+	L1MEd	LINE/L1	689	897	(6189)	2481969
1922	18.7	0.3	0.0	chr22	44446861	44447165	(6371303)	+	AluJr	SINE/Alu	1	306	(6)	2481970
21	4.0	0.0	0.0	chr22	45062847	45062872	(5755596)	+	(CA)n	Simple_repeat	1	26	(0)	2483152
61	0.0	0.0	0.0	chr22	45063003	45063057	(5755411)	+	(ATTTT)n	Simple_repeat	1	55	(0)	2483153
1081	13.2	0.0	0.0	chr22	45063058	45063208	(5755260)	C	AluSx	SINE/Alu	(28)	284	134	2483154
12	12.8	5.6	2.6	chr22	48667348	48667383	(2151085)	+	(GGCAGGA)n	Simple_repeat	1	38	(0)	2488479
12	16.6	0.0	0.0	chr22	48958969	48958995	(1859473)	+	(ATGAG)n	Simple_repeat	1	27	(0)	2488818
830	31.0	13.2	2.7	chr3	1100072	1101168	(197194391)	C	L1MEd	LINE/L1	(5361)	1725	497	2493910
29	17.9	3.8	2.4	chr3	4493401	4493479	(193802080)	+	GA-rich	Low_complexity	1	82	(0)	2499109
2452	18.8	6.1	1.3	chr3	5638684	5639211	(192656348)	C	MER89	LTR/ERV1	(0)	559	5	2501115
704	28.8	5.6	2.2	chr3	14529557	14529918	(183765641)	C	L1MEd	LINE/L1	(6120)	966	592	2517126
876	30.5	7.0	6.5	chr3	14530012	14530411	(183765148)	C	L1MEd	LINE/L1	(6535)	551	150	2517126
846	24.0	1.7	1.1	chr3	16221833	16222009	(182073550)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	2520174
1853	27.1	6.0	6.0	chr3	16222010	16222223	(182073336)	+	L1MEd	LINE/L1	546	767	(6319)	2520173
1961	28.2	9.0	7.7	chr3	17724395	17725677	(180569882)	C	L1MEd	LINE/L1	(5592)	1494	174	2522270
581	32.4	8.2	3.3	chr3	24607478	24607946	(173687613)	C	L1M4	LINE/L1	(852)	5294	4798	2532145
3086	26.3	2.8	3.6	chr3	25648391	25648575	(172646984)	+	L1MB2	LINE/L1	801	866	(5518)	2533609
706	22.8	2.9	0.0	chr3	25870179	25870345	(172425214)	C	L1ME1	LINE/L1	(20)	6159	5988	2533961
422	31.4	7.7	10.5	chr3	25870444	25871033	(172424526)	C	L1MEd	LINE/L1	(6224)	862	291	2533962
22262	15.6	4.6	3.3	chr3	27687764	27693771	(170601788)	+	L1MA1	LINE/L1	11	6412	(1153)	2536603
294	30.5	7.8	3.5	chr3	28597464	28597660	(169697899)	C	MLT1L	LTR/ERVL-MaLR	(207)	403	198	2537981
22	23.2	6.0	2.2	chr3	28598034	28598117	(169697442)	+	(GT)n	Simple_repeat	1	89	(0)	2537982
15	19.6	8.2	1.5	chr3	29280643	29280703	(169014856)	+	(CCTT)n	Simple_repeat	1	66	(0)	2538963
180	19.1	0.0	4.5	chr3	29280827	29280870	(169014689)	C	MamRTE1	LINE/RTE-BovB	(437)	3375	3334	2538964
11480	10.2	0.2	0.9	chr3	31605728	31607318	(166688241)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2542353
1899	25.3	11.4	0.8	chr3	32423988	32424505	(165871054)	C	MLT1G3	LTR/ERVL-MaLR	(15)	580	1	2543864
242	34.6	7.0	3.0	chr3	36843859	36844022	(161451537)	+	Charlie11	DNA/hAT-Charlie	81	251	(1945)	2550492
1568	28.7	8.0	1.7	chr3	37827671	37828874	(160466685)	C	L1MEd	LINE/L1	(4427)	1988	652	2552133
2422	29.1	6.9	3.9	chr3	38593364	38594284	(159701275)	C	L1ME3C	LINE/L1	(5978)	1125	842	2553268
1866	15.9	0.3	1.4	chr3	38594285	38594580	(159700979)	C	AluJo	SINE/Alu	(19)	293	1	2553270
2422	27.7	10.1	3.6	chr3	38594581	38595233	(159700326)	C	L1ME3C	LINE/L1	(6262)	841	148	2553268
610	26.9	21.5	2.2	chr3	43796122	43796488	(154499071)	C	LTR16A	LTR/ERVL	(6)	445	7	2561179
516	35.7	8.6	2.7	chr3	46398045	46398533	(151897026)	+	L1MEd	LINE/L1	361	881	(6205)	2565331
242	40.6	1.6	0.0	chr3	46398535	46398657	(151896902)	C	HAL1b	LINE/L1	(1992)	429	305	2565332
450	35.0	0.8	2.5	chr3	46721552	46721794	(151573765)	+	L1MEd	LINE/L1	560	798	(6288)	2565831
253	21.2	9.6	2.6	chr3	46721830	46721945	(151573614)	+	L1ME3E	LINE/L1	6118	6242	(0)	2565833
1749	13.1	2.8	3.4	chr3	48291394	48291684	(150003875)	C	AluJb	SINE/Alu	(23)	289	1	2569106
3484	10.0	3.2	0.2	chr3	53945884	53946365	(144349194)	+	LOR1a	LTR/ERV1	1	497	(0)	2578286
2665	19.6	5.0	2.0	chr3	53946366	53946454	(144349105)	C	MamRep1151	LTR?	(621)	88	4	2578285
1306	29.8	10.9	4.7	chr3	58986362	58987143	(139308416)	+	L1MEd	LINE/L1	256	1091	(6012)	2586876
478	16.2	10.3	3.7	chr3	58987175	58987309	(139308250)	+	L1MEd	LINE/L1	1845	1989	(5114)	2586876
2227	19.3	5.9	0.7	chr3	59146298	59147260	(139148299)	C	L1M4c	LINE/L1	(715)	5701	4536	2587090
1285	21.2	1.3	0.4	chr3	59622757	59622993	(138672566)	C	MER8	DNA/TcMar-Tigger	(0)	239	1	2587773
497	29.5	8.7	4.4	chr3	59622994	59623197	(138672362)	C	L1MEd	LINE/L1	(6136)	967	746	2587772
2041	21.2	6.1	0.2	chr3	66524055	66524489	(131771070)	+	MLT1C	LTR/ERVL-MaLR	6	467	(0)	2599331
1314	20.6	7.8	4.1	chr3	66524490	66524689	(131770870)	C	MER89	LTR/ERV1	(66)	493	296	2599332
2334	8.4	0.3	0.7	chr3	66524690	66524987	(131770572)	C	AluSp	SINE/Alu	(14)	299	3	2599333
482	32.7	3.4	4.1	chr3	73488322	73488614	(124806945)	+	L2b	LINE/L2	2917	3207	(168)	2611253
299	40.5	1.4	3.5	chr3	73742426	73742566	(124552993)	C	MER91A	DNA/hAT-Tip100	(31)	165	28	2611676
456	36.6	2.8	9.8	chr3	74990120	74990467	(123305092)	C	L2b	LINE/L2	(8)	3367	3045	2613578
6915	7.5	16.8	0.5	chr3	76315830	76316888	(121978671)	C	MER11A	LTR/ERVK	(0)	1266	1	2615377
187	35.1	6.1	4.9	chr3	81485647	81485727	(116809832)	+	MamRTE1	LINE/RTE-BovB	406	487	(3325)	2622136
14111	23.4	4.4	1.1	chr3	99170775	99174248	(99121311)	+	L1PREC2	LINE/L1	18	3863	(4292)	2639931
190	33.8	0.0	0.0	chr3	99224578	99224651	(99070908)	C	L2a	LINE/L2	(250)	3176	3103	2639985
1017	11.2	0.7	0.7	chr3	99224730	99224882	(99070677)	+	L1PB2	LINE/L1	5997	6149	(2)	2639986
2847	14.6	6.9	2.1	chr3	99419758	99420282	(98875277)	+	LTR5B	LTR/ERVK	447	998	(4)	2640231
2340	28.3	4.2	3.7	chr3	99420324	99421216	(98874343)	C	L1MCb	LINE/L1	(5145)	900	3	2640232
619	24.3	2.0	0.0	chr3	100831071	100831214	(97464345)	+	MLT1F2	LTR/ERVL-MaLR	1	147	(413)	2642233
15	14.3	10.4	1.9	chr3	105353960	105354007	(92941552)	+	GA-rich	Low_complexity	1	53	(0)	2648160
12	13.7	6.2	0.0	chr3	105354188	105354219	(92941340)	+	(GTTTG)n	Simple_repeat	1	34	(0)	2648161
12	19.4	0.0	8.2	chr3	105354346	105354394	(92941165)	+	(TCCCTC)n	Simple_repeat	1	49	(0)	2648162
1210	27.1	8.4	1.7	chr3	107491314	107492207	(90803352)	C	L1MEd	LINE/L1	(499)	1713	786	2650935
505	33.2	5.4	1.4	chr3	107492245	107492458	(90803101)	C	L1MEd	LINE/L1	(6430)	673	451	2650935
36	25.1	2.9	0.9	chr3	113211709	113211813	(85083746)	+	(CA)n	Simple_repeat	1	108	(0)	2658908
3779	26.5	6.7	6.7	chr3	113527850	113529451	(84766108)	C	MER89-int	LTR/ERV1	(5200)	1601	1	2659323
2155	19.4	13.9	0.8	chr3	113529456	113529937	(84765622)	C	MER89	LTR/ERV1	(4)	555	1	2659323
2327	9.0	3.3	0.8	chr3	113529985	113530343	(84765216)	+	L1MA2	LINE/L1	5937	6304	(0)	2659327
17	5.4	4.3	8.3	chr3	119322570	119322615	(78972944)	+	(CTCCCAC)n	Simple_repeat	1	48	(0)	2667374
12	14.7	3.3	0.0	chr3	119322765	119322794	(78972765)	+	(GCTCCT)n	Simple_repeat	1	31	(0)	2667375
1718	6.9	3.1	0.5	chr3	119638448	119638664	(78656895)	+	AluY	SINE/Alu	84	306	(5)	2667925
13	5.3	0.0	0.0	chr3	120908373	120908392	(77387167)	+	(CGC)n	Simple_repeat	1	20	(0)	2669849
24	9.5	0.0	0.0	chr3	120908416	120908449	(77387110)	+	(TG)n	Simple_repeat	1	34	(0)	2669850
25	10.6	0.0	0.0	chr3	120908449	120908489	(77387070)	+	(GAGAGA)n	Simple_repeat	1	41	(0)	2669851
13	15.9	1.4	12.3	chr3	120908723	120908794	(77386765)	+	(GCGGCG)n	Simple_repeat	1	73	(0)	2669852
26	25.8	2.5	4.8	chr3	120908767	120908887	(77386672)	+	G-rich	Low_complexity	1	124	(0)	2669853
14	12.5	0.0	0.0	chr3	122467378	122467403	(75828156)	+	(CTT)n	Simple_repeat	1	26	(0)	2672037
33	0.0	0.0	0.0	chr3	124110470	124110497	(74185062)	+	(CA)n	Simple_repeat	1	28	(0)	2674796
331	34.2	8.5	10.3	chr3	124110615	124111165	(74184394)	C	L1MEd	LINE/L1	(5538)	687	148	2674794
12	21.8	2.7	0.0	chr3	124410038	124410074	(73885485)	+	GA-rich	Low_complexity	1	38	(0)	2675250
4116	15.7	3.5	5.2	chr3	130407831	130408835	(67886724)	+	MER11C	LTR/ERVK	1	1071	(0)	2685463
444	31.5	3.5	6.8	chr3	131785241	131785564	(66509995)	+	L2a	LINE/L2	2956	3268	(158)	2687433
380	30.8	6.2	4.0	chr3	131785629	131785648	(66509911)	C	L1MEd	LINE/L1	(6326)	760	735	2687434
49	4.1	0.0	0.0	chr3	131785649	131785699	(66509860)	+	(CT)n	Simple_repeat	1	51	(0)	2687435
380	30.8	6.2	4.0	chr3	131785700	131785928	(66509631)	C	L1MEd	LINE/L1	(6352)	734	506	2687434
12083	5.3	0.7	0.1	chr3	133480708	133482992	(64812567)	+	L1PA6	LINE/L1	3835	6133	(21)	2689978
349	22.4	2.3	7.6	chr3	134037564	134037655	(64257904)	+	MIR	SINE/MIR	32	118	(144)	2690835
594	24.9	9.7	0.3	chr3	134308246	134308442	(63987117)	C	MIRb	SINE/MIR	(4)	258	47	2691257
338	11.1	2.4	8.0	chr3	134308958	134309045	(63986514)	+	Charlie7	DNA/hAT-Charlie	34	116	(2496)	2691258
293	13.9	3.8	1.9	chr3	134476189	134476249	(63819310)	+	LTR16A1	LTR/ERVL	44	105	(333)	2691535
1251	19.0	7.1	6.6	chr3	134476322	134476670	(63818889)	+	LTR16A1	LTR/ERVL	106	456	(0)	2691535
18526	10.2	4.1	4.1	chr3	138582789	138586170	(59709389)	+	L1MA2	LINE/L1	3331	6706	(859)	2697745
1312	8.8	4.0	0.0	chr3	138586171	138586340	(59709219)	C	AluSc8	SINE/Alu	(19)	292	116	2697746
7039	19.8	8.1	9.5	chr3	138767449	138769230	(59526329)	C	MER52A	LTR/ERV1	(0)	1755	1	2698100
15010	13.6	3.6	0.8	chr3	139415492	139419805	(58875754)	C	L1M1	LINE/L1	(3001)	4564	22	2699269
385	24.8	3.6	5.3	chr3	141727492	141727661	(56567898)	C	MLT1J	LTR/ERVL-MaLR	(119)	393	227	2702752
2134	8.7	3.1	0.0	chr3	141727689	141727965	(56567594)	C	AluSp	SINE/Alu	(3)	310	25	2702753
658	27.7	9.2	7.7	chr3	141802543	141802894	(56492665)	+	LTR16D2	LTR/ERVL	1	358	(214)	2702878
234	22.4	0.0	0.0	chr3	141802950	141803007	(56492552)	C	L1ME2z	LINE/L1	(11)	6433	6376	2702879
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
263	33.7	8.9	1.6	chr3	143783238	143783487	(54512072)	+	L2c	LINE/L2	2922	3191	(196)	2706148
266	23.9	6.6	0.0	chr3	143783515	143783627	(54511932)	+	L1M5	LINE/L1	5751	5871	(372)	2706149
8698	18.9	6.0	10.6	chr3	143941048	143942104	(54353455)	+	L1M2	LINE/L1	4524	5614	(698)	2706374
1166	30.2	11.1	2.4	chr3	145329624	145330648	(52964911)	C	L1ME2	LINE/L1	(1369)	5031	3907	2708192
350	34.6	10.0	6.7	chr3	146626726	146627245	(51668314)	+	L2	LINE/L2	1852	2390	(1029)	2709814
524	27.5	4.5	1.7	chr3	146976647	146976820	(51318739)	C	MIR	SINE/MIR	(72)	190	12	2710257
15	20.2	4.8	4.6	chr3	148991651	148991712	(49303847)	+	(CCG)n	Simple_repeat	1	65	(0)	2712870
15	11.5	2.3	6.8	chr3	148992096	148992138	(49303421)	+	(CGGCCC)n	Simple_repeat	1	44	(0)	2712871
1806	14.5	5.9	0.7	chr3	150598187	150598475	(47697084)	+	AluJr	SINE/Alu	1	305	(7)	2715503
356	27.9	9.8	7.1	chr3	150598476	150598566	(47696993)	+	L1MC5a	LINE/L1	8755	8855	(449)	2715502
292	27.1	2.7	0.0	chr3	150598623	150598729	(47696830)	+	MER90a	LTR/ERV1	164	273	(302)	2715504
547	14.4	17.1	8.2	chr3	150598734	150598782	(47696777)	+	LTR23	LTR/ERV1	1	52	(385)	2715505
2326	8.5	3.0	0.0	chr3	150598783	150599077	(47696482)	C	AluYm1	SINE/Alu	(6)	305	2	2715506
1560	16.8	5.3	3.0	chr3	151398718	151399048	(46896511)	C	MER44A	DNA/TcMar-Tigger	(0)	339	1	2716751
671	22.4	2.4	4.9	chr3	151399064	151399279	(46896280)	+	MIR	SINE/MIR	59	261	(1)	2716752
754	27.1	7.2	5.8	chr3	151503118	151503599	(46791960)	+	L1MEg	LINE/L1	619	1107	(5118)	2716873
25905	4.8	0.4	0.2	chr3	151509491	151515631	(46779928)	+	L1PA4	LINE/L1	1	6155	(0)	2716879
395	33.5	5.4	5.3	chr3	151778189	151778813	(46516746)	+	L1MEg	LINE/L1	780	1405	(5010)	2717255
1705	15.2	0.4	2.8	chr3	152057889	152058170	(46237389)	C	AluJr	SINE/Alu	(9)	303	29	2717657
5458	13.0	1.8	1.2	chr3	152058189	152059539	(46236020)	C	L1PA16	LINE/L1	(11)	6155	4802	2717658
19949	15.3	3.4	1.4	chr3	152502368	152506468	(45789091)	C	L1M1	LINE/L1	(3380)	4185	2	2718276
1992	25.8	4.8	5.8	chr3	154185134	154185947	(44109612)	C	MER21C	LTR/ERVL	(33)	905	9	2720841
15056	20.3	5.3	4.1	chr3	154389159	154394899	(43900660)	+	L1M3d	LINE/L1	372	6058	(696)	2721115
707	30.1	4.8	6.7	chr3	154801700	154802339	(43493220)	+	L1MEd	LINE/L1	488	1114	(5972)	2721658
223	39.4	0.0	1.0	chr3	155026981	155027080	(43268479)	+	L2c	LINE/L2	2381	2479	(940)	2721929
380	28.6	10.8	5.4	chr3	155027476	155027623	(43267936)	+	L2c	LINE/L2	2977	3136	(251)	2721929
895	24.9	15.3	7.5	chr3	156747433	156747936	(41547623)	C	MLT1L	LTR/ERVL-MaLR	(49)	561	12	2724486
804	26.7	8.6	5.2	chr3	157057214	157057672	(41237887)	C	L1MEd	LINE/L1	(4993)	2093	1618	2724905
503	31.2	9.2	9.4	chr3	157057673	157058171	(41237388)	C	L1MEd	LINE/L1	(6139)	947	450	2724905
1209	20.1	12.2	1.9	chr3	157058176	157058484	(41237075)	+	MER2	DNA/TcMar-Tigger	1	345	(0)	2724906
358	34.9	6.0	2.0	chr3	159685769	159686134	(38609425)	+	L1MEd	LINE/L1	1257	1631	(5702)	2728579
492	27.9	6.8	1.2	chr3	159686441	159686690	(38608869)	+	L1MEd	LINE/L1	1799	2063	(6131)	2728579
507	16.9	7.1	4.8	chr3	159686704	159686827	(38608732)	C	MamGypLTR2c	LTR/Gypsy	(60)	1008	882	2728580
336	29.6	16.9	4.4	chr3	159701391	159701616	(38593943)	C	L1M5	LINE/L1	(3240)	2906	2647	2728598
12	18.1	0.0	3.0	chr3	159701758	159701790	(38593769)	+	(CTTTT)n	Simple_repeat	1	33	(0)	2728599
254	22.8	23.7	2.9	chr3	159701874	159702002	(38593557)	+	MIR	SINE/MIR	2	166	(96)	2728600
722	27.1	12.7	10.8	chr3	160210792	160211246	(38084313)	+	MLT1J	LTR/ERVL-MaLR	43	507	(5)	2729465
5675	13.4	13.4	0.7	chr3	163878139	163879214	(34416345)	C	MER11B	LTR/ERVK	(2)	1234	1	2734282
18432	19.1	3.4	1.5	chr3	165766842	165769120	(32526439)	C	L1M1	LINE/L1	(5209)	2356	16	2736674
2517	10.1	0.0	0.6	chr3	165878974	165879332	(32416227)	+	L1PA8	LINE/L1	5814	6170	(2)	2736812
7389	3.2	0.0	0.0	chr3	165879804	165880718	(32414841)	C	L1PA3	LINE/L1	(2362)	3784	2870	2736813
613	34.0	7.8	1.8	chr3	184494246	184494629	(13800930)	+	L2b	LINE/L2	2951	3359	(16)	2764755
1319	9.1	0.5	1.1	chr3	184494670	184494857	(13800702)	C	MER89	LTR/ERV1	(2)	557	371	2764756
2153	12.5	0.3	0.0	chr3	184494899	184495193	(13800366)	+	AluSp	SINE/Alu	1	296	(17)	2764757
535	36.2	4.6	2.9	chr3	189606096	189606476	(8689083)	+	L1MEd	LINE/L1	441	828	(6258)	2773822
696	26.2	12.2	6.5	chr3	189606480	189606505	(8689054)	+	MLT1F2	LTR/ERVL-MaLR	3	26	(534)	2773823
1604	12.2	7.1	6.1	chr3	189606506	189606810	(8688749)	C	AluSz6	SINE/Alu	(0)	312	1	2773824
2243	20.0	2.5	1.2	chr3	191698223	191698991	(6596568)	C	L1MC4	LINE/L1	(510)	5732	4738	2776898
26	16.0	0.0	0.0	chr3	192834422	192834464	(5461095)	+	A-rich	Low_complexity	1	43	(0)	2778536
2467	7.3	0.3	0.0	chr3	192834807	192835107	(5460452)	C	AluSc	SINE/Alu	(7)	302	1	2778537
2348	10.1	0.0	0.0	chr3	194482826	194483122	(3812437)	+	AluSx3	SINE/Alu	1	297	(14)	2781187
1729	15.6	0.0	6.9	chr3	194483123	194483306	(3812253)	+	AluJr	SINE/Alu	132	298	(14)	2781186
1874	17.9	0.0	0.0	chr3	194483312	194483596	(3811963)	+	AluJb	SINE/Alu	5	289	(23)	2781188
16	18.7	6.1	0.0	chr3	195543395	195543443	(2752116)	+	(CCGCC)n	Simple_repeat	1	52	(0)	2783235
258	21.6	6.3	3.9	chr3	196199463	196199539	(2096020)	+	L1MC4	LINE/L1	6785	6863	(1179)	2784484
2850	25.6	6.9	3.0	chr3	196408539	196409643	(1885916)	C	L1MEd	LINE/L1	(5422)	1664	513	2784942
4121	21.3	5.0	0.7	chr3	196970717	196971576	(1323983)	C	MER54A	LTR/ERVL	(0)	901	3	2786138
19	13.7	0.0	8.8	chr3	197003355	197003411	(1292148)	+	G-rich	Low_complexity	1	57	(0)	2786206
318	31.3	2.1	1.3	chr4	2141062	2141231	(188073324)	+	MLT1K	LTR/ERVL-MaLR	424	594	(16)	2791144
2162	10.8	5.0	4.2	chr4	2983727	2984104	(187230451)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2792526
853	24.7	11.5	5.4	chr4	2984105	2984217	(187230338)	+	L2a	LINE/L2	3299	3422	(4)	2792525
207	30.4	0.0	1.4	chr4	2984215	2984284	(187230271)	C	MIRb	SINE/MIR	(79)	189	121	2792527
2235	9.8	0.0	0.0	chr4	8886107	8886392	(181328163)	+	AluSg	SINE/Alu	21	306	(4)	2802420
266	34.2	1.3	0.0	chr4	13677785	13677860	(176536695)	C	MIR3	SINE/MIR	(102)	106	30	2809695
2177	14.9	4.3	0.8	chr4	13677861	13678239	(176536316)	C	MER89	LTR/ERV1	(0)	559	167	2809696
4958	13.2	3.0	2.2	chr4	16458179	16458944	(173755611)	C	LTR1F	LTR/ERV1	(0)	772	1	2814358
655	13.4	0.0	0.0	chr4	22681159	22681255	(167533300)	C	AluSx	SINE/Alu	(15)	297	201	2824361
25	20.3	0.0	2.5	chr4	22681274	22681326	(167533229)	+	A-rich	Low_complexity	1	51	(0)	2824362
2505	15.2	0.5	0.3	chr4	25205195	25205584	(165008971)	+	MER89	LTR/ERV1	167	557	(2)	2828493
2283	13.2	0.7	0.0	chr4	25205746	25206048	(165008507)	C	AluSz	SINE/Alu	(7)	305	1	2828494
4843	18.6	2.4	3.3	chr4	38520005	38520460	(151694095)	+	L1MC3	LINE/L1	6804	7254	(531)	2847921
8900	16.6	4.2	2.5	chr4	39123104	39125809	(151088746)	+	L1MB5	LINE/L1	3360	6115	(59)	2849030
18789	16.4	3.5	0.9	chr4	43472831	43477399	(146737156)	C	L1M1	LINE/L1	(2864)	4701	13	2857022
431	36.2	3.5	1.8	chr4	46533249	46533588	(143680967)	+	L1MEf	LINE/L1	37	382	(6018)	2860969
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
1130	13.8	0.3	0.1	chr4	49514156	49515857	(140698698)	+	ACRO1	Satellite/acro	1	1705	(0)	2865184
406	18.9	2.2	0.5	chr4	49573746	49573848	(140640707)	+	MSTA	LTR/ERVL-MaLR	4	113	(262)	2865274
271	21.9	1.9	0.4	chr4	49573937	49574021	(140640534)	+	THE1D-int	LTR/ERVL-MaLR	959	1064	(587)	2865275
839	22.6	15.8	2.1	chr4	49573984	49574223	(140640332)	C	THE1D-int	LTR/ERVL-MaLR	(398)	1233	955	2865276
867	26.6	5.5	4.6	chr4	49574228	49574534	(140640021)	+	MSTA	LTR/ERVL-MaLR	76	385	(43)	2865274
1012	19.1	3.5	3.4	chr4	54414283	54414549	(135800006)	C	L1MC5	LINE/L1	(24)	9280	9026	2869259
621	34.0	5.3	7.3	chr4	54414616	54414784	(135799771)	C	L1MEd	LINE/L1	(6216)	870	699	2869257
26	0.0	0.0	0.0	chr4	54414785	54414809	(135799746)	+	(T)n	Simple_repeat	1	25	(0)	2869260
621	34.0	5.3	7.3	chr4	54414810	54415510	(135799045)	C	L1MEd	LINE/L1	(6388)	698	20	2869257
17	13.9	0.0	6.7	chr4	55125629	55125673	(135088882)	+	G-rich	Low_complexity	1	45	(0)	2870381
321	21.9	4.0	0.0	chr4	55352438	55352510	(134862045)	+	Charlie4a	DNA/hAT-Charlie	433	508	(0)	2870732
238	26.9	11.5	1.8	chr4	55352513	55352622	(134861933)	+	L2a	LINE/L2	3303	3424	(2)	2870733
2470	8.7	0.0	0.6	chr4	55495908	55496219	(134718336)	+	AluSx1	SINE/Alu	2	311	(1)	2870991
2442	6.5	0.7	0.7	chr4	55588866	55589158	(134625397)	C	AluY	SINE/Alu	(18)	293	1	2871166
352	35.4	6.6	2.8	chr4	55589167	55589384	(134625171)	C	L1MEd	LINE/L1	(6265)	821	595	2871167
229	35.8	1.3	6.2	chr4	57273838	57273998	(132940557)	+	LTR88a	LTR/Gypsy?	661	813	(3)	2874270
1418	19.9	13.4	0.5	chr4	62513374	62513770	(127700785)	+	MER89	LTR/ERV1	2	557	(2)	2880901
1656	18.6	7.9	6.4	chr4	62513816	62514287	(127700268)	C	MER34C2	LTR/ERV1	(36)	519	40	2880902
1319	27.4	9.8	0.8	chr4	65791855	65792236	(124422319)	+	MLT2F	LTR/ERVL	186	605	(58)	2884827
36	24.6	0.0	1.1	chr4	65792238	65792325	(124422230)	+	(TC)n	Simple_repeat	1	88	(0)	2884828
1019	35.2	8.3	6.0	chr4	65792354	65793265	(124421290)	C	L2	LINE/L2	(1491)	1928	994	2884829
10870	21.4	5.1	1.3	chr4	66075783	66079007	(124135548)	+	L1MA9	LINE/L1	3836	7195	(536)	2885179
18	20.0	2.7	4.4	chr4	73127869	73127928	(117086627)	+	A-rich	Low_complexity	1	58	(0)	2894454
351	33.3	6.2	4.3	chr4	73128095	73128282	(117086273)	C	MIRb	SINE/MIR	(64)	204	13	2894455
1322	23.4	2.0	7.0	chr4	74896442	74896929	(115317626)	C	MER89	LTR/ERV1	(0)	559	1	2896831
37	4.7	2.3	0.0	chr4	84451687	84451730	(105762825)	+	(TG)n	Simple_repeat	1	45	(0)	2911122
3411	21.8	3.7	6.1	chr4	86222784	86223651	(103990904)	+	LTR53-int	LTR/ERVL	1547	2392	(937)	2913515
1842	16.3	2.5	3.0	chr4	86223652	86224012	(103990543)	+	LTR52	LTR/ERVL	53	411	(10)	2913516
3920	7.1	0.8	0.2	chr4	86460524	86461032	(103753523)	+	MER9a3	LTR/ERVK	1	512	(0)	2913882
560	15.5	2.0	1.0	chr4	86461033	86461130	(103753425)	+	HERVK9-int	LTR/ERVK	1	99	(5922)	2913882
1337	13.5	7.1	5.8	chr4	86461142	86461432	(103753123)	C	MER4D1	LTR/ERV1	(27)	873	579	2913883
554	10.6	0.0	0.0	chr4	86461433	86461498	(103753057)	+	AluSz	SINE/Alu	1	66	(246)	2913884
4781	9.2	2.8	3.3	chr4	87417839	87418859	(102795696)	+	MER11A	LTR/ERVK	1	1266	(0)	2915476
723	28.1	4.7	3.2	chr4	88814028	88814277	(101400278)	C	MIRb	SINE/MIR	(8)	260	7	2917706
22	3.5	3.5	0.0	chr4	88814384	88814412	(101400143)	+	(GA)n	Simple_repeat	1	30	(0)	2917707
24	19.2	0.0	1.8	chr4	89837163	89837217	(100377338)	+	(TCC)n	Simple_repeat	1	55	(0)	2919194
13	18.9	2.0	6.0	chr4	89837455	89837503	(100377052)	+	(CCTCTT)n	Simple_repeat	1	50	(0)	2919195
20512	13.0	3.4	1.0	chr4	91565086	91569425	(98645130)	C	L1PA14	LINE/L1	(1178)	6963	2545	2921298
593	31.7	8.9	4.4	chr4	92626498	92627160	(97587395)	+	L1MEd	LINE/L1	420	1115	(5971)	2922519
262	38.3	3.0	9.5	chr4	93149233	93149292	(97065263)	+	L3	LINE/CR1	3652	3710	(389)	2923246
1981	15.4	0.7	0.7	chr4	93149293	93149591	(97064964)	+	AluSz	SINE/Alu	2	300	(12)	2923247
814	18.4	0.2	1.9	chr4	94367270	94367449	(95847106)	C	L1M1	LINE/L1	(7405)	160	2	2924893
357	35.7	8.2	3.0	chr4	94367431	94367696	(95846859)	+	L1MEd	LINE/L1	245	525	(6561)	2924894
1374	29.6	6.3	1.9	chr4	94367750	94368030	(95846525)	+	L1MEd	LINE/L1	619	925	(6161)	2924894
26	2.8	2.6	2.6	chr4	94368031	94368068	(95846487)	+	(AATTGTCAA)n	Simple_repeat	1	39	(0)	2924895
1374	29.6	6.3	1.9	chr4	94368069	94368591	(95845964)	+	L1MEd	LINE/L1	926	1460	(5626)	2924894
1903	11.5	1.9	0.4	chr4	94711491	94711751	(95502804)	C	AluSx1	SINE/Alu	(42)	270	6	2925425
3826	12.3	7.0	3.2	chr4	102718684	102719555	(87495000)	C	MER11A	LTR/ERVK	(0)	1266	219	2936045
2190	25.4	8.2	4.4	chr4	102858790	102859389	(87355166)	C	L1M3c	LINE/L1	(4171)	3395	2668	2936257
232	30.7	7.8	6.0	chr4	111806485	111806699	(78407856)	C	MamGypLTR1c	LTR/Gypsy	(247)	535	317	2948264
393	25.6	6.6	8.3	chr4	111806704	111806880	(78407675)	C	MamGypLTR1c	LTR/Gypsy	(578)	204	13	2948264
374	27.1	0.6	5.0	chr4	115044627	115044805	(75169750)	+	L1MEd	LINE/L1	682	852	(6234)	2952779
681	28.4	7.5	2.6	chr4	115044789	115045092	(75169463)	+	L1M5	LINE/L1	5321	5640	(602)	2952780
1222	22.4	11.1	1.1	chr4	117798649	117799013	(72415542)	+	L1MEc	LINE/L1	9	414	(5986)	2956075
1931	4.1	0.0	0.0	chr4	117799018	117799236	(72415319)	C	AluY	SINE/Alu	(7)	304	86	2956076
19	20.8	0.0	0.0	chr4	118888870	118888913	(71325642)	+	(GGC)n	Simple_repeat	1	44	(0)	2957660
1386	29.0	4.2	2.7	chr4	119746841	119747315	(70467240)	C	LTR33A_	LTR/ERVL	(49)	482	1	2958926
235	30.8	3.2	1.1	chr4	119747317	119747408	(70467147)	C	L2c	LINE/L2	(53)	3334	3241	2958927
366	31.5	7.0	6.0	chr4	121712247	121712530	(68502025)	C	MER65B	LTR/ERV1	(19)	454	156	2961441
5847	11.9	14.3	2.5	chr4	128265256	128266341	(61948214)	C	MER11B	LTR/ERVK	(0)	1236	1	2970459
22	0.0	0.0	0.0	chr4	128810451	128810474	(61404081)	+	(T)n	Simple_repeat	1	24	(0)	2971408
1334	22.6	3.1	0.6	chr4	129489934	129490245	(60724310)	+	MLT2D	LTR/ERVL	8	327	(87)	2972234
264	13.3	0.0	6.2	chr4	129490237	129490284	(60724271)	+	MLT2D	LTR/ERVL	516	560	(0)	2972234
574	23.4	15.2	2.1	chr4	129490606	129490815	(60723740)	C	MER77B	LTR/ERVL	(323)	377	125	2972235
597	35.3	7.4	5.4	chr4	131382148	131382703	(58831852)	C	L1MEd	LINE/L1	(5952)	1151	455	2974547
3122	23.4	5.6	4.3	chr4	138696120	138696953	(51517602)	+	LTR82A	LTR/ERVL	1	845	(27)	2983224
17	20.7	3.3	3.2	chr4	143184775	143184834	(47029721)	+	G-rich	Low_complexity	1	62	(0)	2989909
35	2.8	0.0	0.0	chr4	143184837	143184873	(47029682)	+	(GGCGGAGG)n	Simple_repeat	1	37	(0)	2989910
432	24.8	0.0	10.0	chr4	143624587	143624716	(46589839)	C	L2c	LINE/L2	(0)	3387	3271	2990547
501	26.3	0.8	0.0	chr4	143624715	143624832	(46589723)	+	L2a	LINE/L2	3302	3420	(6)	2990545
463	24.4	0.0	1.6	chr4	143624833	143624961	(46589594)	C	L1MEd	LINE/L1	(6271)	815	689	2990548
22	3.5	0.0	0.0	chr4	143625074	143625102	(46589453)	+	(AAC)n	Simple_repeat	1	29	(0)	2990549
1032	28.9	11.3	6.8	chr4	145605669	145607121	(44607434)	C	L1MEd	LINE/L1	(4654)	1571	3	2993153
3641	10.5	1.6	2.5	chr4	164740379	164741315	(25473240)	+	MER11A	LTR/ERVK	1	1174	(92)	3019787
41	0.0	0.0	0.0	chr4	165580382	165580416	(24634139)	+	(TG)n	Simple_repeat	1	35	(0)	3021315
11196	19.7	1.6	2.0	chr4	168351746	168354157	(21860398)	C	L1PA14	LINE/L1	(4050)	2639	1	3024684
1084	11.1	4.7	0.6	chr4	169698106	169698287	(20516268)	C	L1MA3	LINE/L1	(7)	6298	6109	3026706
228	24.6	6.2	1.6	chr4	169698300	169698361	(20516194)	C	MLT1G	LTR/ERVL-MaLR	(215)	376	312	3026705
18	19.3	2.3	2.3	chr4	169698380	169698422	(20516133)	+	(TC)n	Simple_repeat	1	44	(0)	3026707
546	25.0	20.0	1.4	chr4	169698434	169698656	(20515899)	C	MLT1G	LTR/ERVL-MaLR	(307)	284	10	3026705
19	8.5	0.0	8.9	chr4	182449092	182449136	(7765419)	+	(GCG)n	Simple_repeat	1	45	(0)	3043420
28	10.0	0.0	0.0	chr4	182449187	182449230	(7765325)	+	(GCG)n	Simple_repeat	1	44	(0)	3043420
424	37.3	2.0	2.0	chr4	183068474	183068722	(7145833)	+	L1MEd	LINE/L1	512	760	(6326)	3044331
1354	20.8	18.5	5.4	chr4	183068724	183069129	(7145426)	C	LTR16B2	LTR/ERVL	(2)	460	2	3044332
1319	25.3	6.6	1.8	chr4	183069130	183069519	(7145036)	C	ERV3-16A3_I-int	LTR/ERVL	(6)	5220	4811	3044332
14	9.3	0.0	0.0	chr4	184734032	184734054	(5480501)	+	(GCC)n	Simple_repeat	1	23	(0)	3047089
180	30.0	0.0	2.0	chr4	186660057	186660107	(3554448)	C	MIR3	SINE/MIR	(148)	60	11	3049961
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
7790	7.7	1.0	1.3	chr4	190106259	190107263	(107292)	C	LTR5B	LTR/ERVK	(0)	1002	1	3054628
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
491	31.8	14.4	3.5	chr5	6656632	6657094	(174881165)	+	L1M8	LINE/L1	726	1247	(6110)	3062139
21	16.7	2.1	0.0	chr5	10354121	10354167	(171184092)	+	G-rich	Low_complexity	1	48	(0)	3066756
3377	14.6	0.9	0.7	chr5	14115256	14115792	(167422467)	C	LTR26C	LTR/ERV1	(0)	539	2	3071805
1581	15.7	4.0	5.7	chr5	34182319	34182469	(147355790)	+	AluJo	SINE/Alu	126	275	(37)	3099474
53	0.0	2.0	0.0	chr5	34182475	34182525	(147355734)	+	(AAAT)n	Simple_repeat	1	52	(0)	3099476
578	24.0	1.7	2.8	chr5	38437511	38437686	(143100573)	C	MER5B	DNA/hAT-Charlie	(0)	178	5	3106128
1885	18.6	0.0	0.0	chr5	50713255	50713539	(130824720)	C	AluJb	SINE/Alu	(26)	286	2	3116853
17	0.0	0.0	0.0	chr5	50713540	50713552	(130824707)	+	(ATT)n	Simple_repeat	2	14	(0)	3116854
2028	19.2	4.1	4.1	chr5	50713595	50714055	(130824204)	+	MLT1D	LTR/ERVL-MaLR	1	461	(44)	3116855
1614	30.2	4.3	6.1	chr5	61248709	61249434	(120288825)	+	L1MEd	LINE/L1	100	815	(6271)	3131973
6467	7.7	2.5	1.8	chr5	61249463	61250150	(120288109)	C	L1PA10	LINE/L1	(0)	6168	5488	3131975
7988	18.7	1.5	1.4	chr5	61957741	61959196	(119579063)	C	L1M1	LINE/L1	(6095)	1470	13	3133020
2046	23.3	9.8	2.1	chr5	64688391	64688996	(116849263)	C	MER20B	DNA/hAT-Charlie	(118)	665	14	3136778
13	23.2	3.9	1.9	chr5	69094190	69094241	(112444018)	+	(GCGGCA)n	Simple_repeat	1	54	(0)	3143234
15	12.6	0.0	7.5	chr5	69094270	69094309	(112443950)	+	(CGG)n	Simple_repeat	1	40	(0)	3143235
20621	14.6	5.7	1.7	chr5	76899235	76902745	(104635514)	C	L1MA1	LINE/L1	(3890)	3675	15	3155839
5786	13.4	13.1	1.1	chr5	87048744	87049829	(94488430)	C	MER11B	LTR/ERVK	(0)	1236	1	3170563
1283	18.8	13.6	2.0	chr5	90396839	90397142	(91141117)	+	MER2	DNA/TcMar-Tigger	1	345	(0)	3174701
12	20.1	5.0	0.0	chr5	90397302	90397341	(91140918)	+	(TCTAATA)n	Simple_repeat	1	42	(0)	3174702
208	36.2	2.8	0.0	chr5	93013414	93013482	(88524777)	+	MamSINE1	SINE/tRNA-RTE	38	108	(182)	3178148
276	34.0	4.7	3.4	chr5	96795553	96795698	(84742561)	+	L1MEd	LINE/L1	264	411	(6675)	3183111
573	28.1	12.6	0.7	chr5	96795699	96795970	(84742289)	+	L1MEd	LINE/L1	560	868	(6218)	3183111
2894	1.0	0.0	0.0	chr5	100290602	100290902	(81247357)	C	AluY	SINE/Alu	(10)	301	1	3187524
11900	19.4	7.4	2.1	chr5	100290903	100292011	(81246248)	C	L1MA1	LINE/L1	(6323)	1242	7	3187517
516	33.2	2.7	5.7	chr5	105738354	105738580	(75799679)	C	L1MEg1	LINE/L1	(6005)	230	11	3194209
481	35.4	5.8	6.1	chr5	105738580	105739186	(75799073)	C	L1MEd	LINE/L1	(6218)	885	281	3194207
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
221	30.2	0.0	5.9	chr5	108386793	108386894	(73151365)	+	L2b	LINE/L2	3058	3153	(222)	3197562
1548	17.1	0.0	3.0	chr5	108387068	108387330	(73150929)	+	AluJb	SINE/Alu	36	290	(22)	3197563
1952	12.4	2.9	0.0	chr5	109401022	109401288	(72136971)	+	AluSx1	SINE/Alu	13	287	(25)	3198936
237	27.1	8.2	13.9	chr5	109401289	109401314	(72136945)	+	L1ME1	LINE/L1	2072	2082	(5046)	3198932
770	25.6	0.6	0.0	chr5	109401315	109401478	(72136781)	+	FRAM	SINE/Alu	2	166	(10)	3198937
1847	26.8	6.8	2.1	chr5	115200342	115200734	(66337525)	C	L1MC5a	LINE/L1	(163)	2614	2186	3206435
1252	12.7	10.9	0.0	chr5	115200735	115200939	(66337320)	+	MER30	DNA/hAT-Charlie	1	230	(0)	3206437
1838	18.6	8.4	1.1	chr5	116354158	116354521	(65183738)	+	MLT2B1	LTR/ERVL	2	394	(126)	3208012
59	6.3	0.0	0.0	chr5	116354525	116354592	(65183667)	+	(AC)n	Simple_repeat	1	68	(0)	3208013
1846	27.5	5.0	3.2	chr5	116354764	116355616	(65182643)	+	L1MEd	LINE/L1	877	1745	(5341)	3208014
682	16.5	1.5	1.5	chr5	117095395	117095529	(64442730)	C	MER5A1	DNA/hAT-Charlie	(1)	165	31	3209150
181	40.0	1.2	0.0	chr5	117096199	117096283	(64441976)	+	AmnSINE1	SINE/5S-Deu-L2	69	154	(421)	3209151
10996	11.4	1.6	0.9	chr5	119135881	119137493	(62400766)	+	THE1D-int	LTR/ERVL-MaLR	1	1625	(6)	3211902
1913	14.2	9.4	0.9	chr5	119137499	119137846	(62400413)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3211902
2041	26.8	9.2	1.9	chr5	119137855	119138551	(62399708)	C	L2a	LINE/L2	(411)	3008	2256	3211901
19690	10.8	2.5	1.6	chr5	119138966	119143227	(62395032)	+	L1PREC2	LINE/L1	3803	8155	(0)	3211905
356	28.4	7.4	1.7	chr5	119175882	119176177	(62362082)	C	L1MEh	LINE/L1	(1144)	1321	891	3211942
2357	9.3	4.2	1.6	chr5	125314492	125314862	(56223397)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3219889
5055	8.4	1.1	1.8	chr5	126072780	126073903	(55464356)	+	MER11A	LTR/ERVK	1	1265	(1)	3220750
397	22.5	5.6	7.9	chr5	126610040	126610203	(54928056)	+	MER106B	DNA/hAT-Charlie	899	1058	(1)	3221524
302	28.8	15.3	0.0	chr5	126827691	126827850	(54710409)	C	L2b	LINE/L2	(1159)	2260	2072	3222058
224	32.4	6.2	0.9	chr5	126827934	126828039	(54710220)	+	L2c	LINE/L2	3272	3383	(4)	3222060
1632	19.1	5.3	0.6	chr5	128062876	128063310	(53474949)	C	MER89	LTR/ERV1	(2)	557	1	3223679
1577	28.8	7.5	3.0	chr5	128797988	128798866	(52739393)	+	L1MEd	LINE/L1	409	1346	(4869)	3224587
862	32.6	7.6	0.9	chr5	134038006	134038498	(47499761)	C	L2a	LINE/L2	(26)	3400	2873	3231809
467	29.5	4.2	11.8	chr5	135990218	135990520	(45547739)	C	L2b	LINE/L2	(14)	3361	3096	3235065
54	1.5	2.9	2.8	chr5	135990521	135990590	(45547669)	+	(GCTGGAGGT)n	Simple_repeat	1	72	(0)	3235066
467	29.5	4.2	11.8	chr5	135990591	135990754	(45547505)	C	L2b	LINE/L2	(280)	3095	2931	3235065
13	11.9	5.0	4.8	chr5	135990949	135990988	(45547271)	+	(TGGCAG)n	Simple_repeat	1	42	(0)	3235067
21013	5.9	0.4	0.3	chr5	136942482	136947578	(44590681)	C	L1PA4	LINE/L1	(1044)	5102	1	3236312
3045	20.0	5.5	6.0	chr5	136956871	136957752	(44580507)	C	MER89-int	LTR/ERV1	(5924)	877	1	3236309
2650	18.6	2.7	2.5	chr5	136957753	136958308	(44579951)	C	MER89	LTR/ERV1	(0)	559	3	3236309
1195	26.3	11.9	1.1	chr5	137005354	137005984	(44532275)	+	L1M7	LINE/L1	751	1458	(4853)	3236376
28570	1.6	0.0	0.1	chr5	139005424	139011486	(42526773)	C	L1PA2	LINE/L1	(0)	6155	127	3239953
854	12.3	0.0	0.0	chr5	139011516	139011629	(42526630)	C	AluJr	SINE/Alu	(194)	118	5	3239954
580	28.6	3.6	3.1	chr5	139011662	139011856	(42526403)	C	L1MEd	LINE/L1	(6332)	754	559	3239950
559	24.6	1.3	1.9	chr5	139011861	139012051	(42526208)	C	L1MC5	LINE/L1	(9)	9295	9162	3239955
2395	10.0	0.0	1.0	chr5	141230941	141231239	(40307020)	C	AluSp	SINE/Alu	(17)	296	1	3243761
326	0.0	0.0	0.0	chr5	141231283	141231320	(40306939)	C	Alu	SINE/Alu	(9)	292	255	3243762
1237	26.2	7.8	4.7	chr5	141231416	141232159	(40306100)	+	L1MEd	LINE/L1	710	1478	(5608)	3243760
1991	14.5	0.7	1.3	chr5	142338698	142339000	(39199259)	+	AluJo	SINE/Alu	1	301	(11)	3245754
1099	29.4	8.7	1.5	chr5	142339001	142339330	(39198929)	C	L1MEd	LINE/L1	(6092)	994	639	3245744
1376	11.8	0.0	3.5	chr5	142339336	142339441	(39198818)	C	AluSz	SINE/Alu	(73)	239	137	3245755
2056	12.4	1.4	0.0	chr5	142339442	142339724	(39198535)	C	AluSg	SINE/Alu	(11)	299	13	3245756
795	28.9	5.7	0.7	chr5	149238520	149238818	(32299441)	+	MER102b	DNA/hAT-Charlie	2	316	(25)	3257279
289	34.7	2.9	1.6	chr5	149238895	149239098	(32299161)	+	MIRc	SINE/MIR	1	200	(8)	3257280
380	30.0	10.2	0.7	chr5	149417829	149417979	(32120280)	+	MIR3	SINE/MIR	36	202	(6)	3257692
247	30.3	1.7	7.5	chr5	149418209	149418344	(32119915)	C	MIR3	SINE/MIR	(19)	189	66	3257693
15	15.1	2.6	2.5	chr5	150843979	150844017	(30694242)	+	(AATGGTT)n	Simple_repeat	1	40	(0)	3260778
5217	13.8	15.7	3.6	chr5	151729381	151730458	(29807801)	C	MER11B	LTR/ERVK	(4)	1232	1	3262501
383	35.1	2.4	5.5	chr5	153278557	153278773	(28259486)	+	MIRb	SINE/MIR	27	236	(32)	3264987
236	24.9	10.3	4.1	chr5	156870973	156871144	(24667115)	+	L1MEd	LINE/L1	22	205	(6898)	3271518
484	28.3	9.0	8.1	chr5	156871262	156871830	(24666429)	+	L1MEd	LINE/L1	567	1141	(5962)	3271518
5050	16.9	2.3	8.3	chr5	158004695	158006382	(23531877)	C	L1MA6	LINE/L1	(0)	6312	4633	3273833
1052	22.0	11.8	7.3	chr5	163731295	163731730	(17806529)	+	MER39	LTR/ERV1	250	707	(0)	3283034
593	31.4	6.8	4.3	chr5	164162766	164163138	(17375121)	+	MLT1K	LTR/ERVL-MaLR	194	576	(19)	3283631
849	29.7	1.4	0.9	chr5	168736832	168737052	(12801207)	+	MIRb	SINE/MIR	39	260	(8)	3290675
16	20.3	0.0	0.0	chr5	168737455	168737490	(12800769)	+	(GCACAC)n	Simple_repeat	1	36	(0)	3290676
792	21.2	4.7	3.1	chr5	168737711	168737939	(12800320)	+	LTR86A1	LTR/ERVL	68	300	(213)	3290677
2304	12.2	0.0	0.3	chr5	171346921	171347232	(10191027)	+	AluSx	SINE/Alu	1	311	(1)	3295075
2330	13.4	5.2	9.5	chr5	171347233	171347642	(10190617)	C	L1MA9	LINE/L1	(899)	5241	4837	3295073
20	12.1	0.0	0.0	chr5	171555047	171555082	(9983177)	+	(GGTTTTT)n	Simple_repeat	1	36	(0)	3295562
244	28.3	8.6	9.2	chr5	173234254	173234405	(8303854)	+	Charlie4z	DNA/hAT-Charlie	12	162	(5)	3299237
745	32.9	8.9	0.6	chr5	175317922	175318260	(6219999)	+	MLT1E1A	LTR/ERVL-MaLR	42	411	(0)	3303215
707	24.7	14.5	1.1	chr5	176715207	176715492	(4822767)	C	HAL1	LINE/L1	(653)	1854	1524	3305852
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
19	8.1	0.0	0.0	chr5	178702083	178702108	(2836151)	+	(A)n	Simple_repeat	1	26	(0)	3309665
2433	9.0	0.0	0.0	chr5	178702289	178702598	(2835661)	C	AluSx4	SINE/Alu	(0)	310	1	3309666
4228	17.4	7.8	0.1	chr6	213695	214454	(170591525)	+	LTR1B	LTR/ERV1	2	824	(0)	3314527
186	26.2	13.0	2.4	chr6	214766	214847	(170591132)	+	L3	LINE/CR1	155	246	(3853)	3314528
232	35.9	6.2	2.2	chr6	551345	551529	(170254450)	+	L3b	LINE/CR1	4423	4615	(617)	3314941
1446	26.7	19.8	0.5	chr6	2268266	2268669	(168537310)	C	L2	LINE/L2	(2491)	928	376	3317201
587	13.8	3.0	26.9	chr6	2268674	2268892	(168537087)	C	MER5A1	DNA/hAT-Charlie	(1)	165	1	3317203
6140	15.0	2.2	1.8	chr6	4014066	4014356	(166791623)	+	L1M3	LINE/L1	4999	5280	(860)	3319814
1123	15.2	0.0	2.8	chr6	4014361	4014537	(166791442)	+	AluJr4	SINE/Alu	16	187	(125)	3319816
627	30.6	6.0	4.5	chr6	4443445	4443711	(166362268)	C	L1MEd	LINE/L1	(6102)	1001	720	3320438
777	22.6	3.1	0.0	chr6	4443712	4443866	(166362113)	C	AluJo	SINE/Alu	(16)	296	137	3320440
599	30.6	6.0	4.5	chr6	4443867	4443957	(166362022)	C	L1MEd	LINE/L1	(6384)	719	637	3320438
1734	30.1	9.8	4.8	chr6	6061712	6062902	(164743077)	C	L1MEd	LINE/L1	(5755)	1348	95	3322946
1097	29.8	8.9	12.2	chr6	6603442	6605145	(164200834)	+	L1MEd	LINE/L1	59	1702	(5401)	3323630
1730	18.1	1.7	0.0	chr6	10226969	10227260	(160578719)	+	AluJo	SINE/Alu	1	297	(15)	3329153
1992	26.6	6.4	5.4	chr6	10227262	10228471	(160577508)	+	L1MEd	LINE/L1	583	1805	(5298)	3329154
2260	10.9	0.3	0.0	chr6	14883592	14883894	(155922085)	+	AluSx1	SINE/Alu	2	305	(7)	3336707
344	31.4	14.9	5.5	chr6	15434932	15435389	(155370590)	C	L1MEd	LINE/L1	(6122)	964	456	3337949
335	28.7	13.4	1.1	chr6	17676579	17676754	(153129225)	+	L1MEb	LINE/L1	43	243	(6157)	3341571
2433	15.4	6.8	0.5	chr6	19875158	19875554	(150930425)	+	MSTB	LTR/ERVL-MaLR	3	426	(0)	3345039
1706	16.5	3.8	14.2	chr6	19875555	19875716	(150930263)	C	L1MC1	LINE/L1	(240)	6093	5956	3345038
1421	18.1	7.8	1.6	chr6	21608812	21609122	(149196857)	+	MER61B	LTR/ERV1	1	423	(4)	3347941
8590	8.0	17.7	0.4	chr6	21609123	21610425	(149195554)	C	LTR12C	LTR/ERV1	(0)	1579	2	3347942
9312	14.0	0.3	0.6	chr6	26257675	26259062	(144546917)	+	HERVK22-int	LTR/ERVK	81	1464	(5373)	3354904
4952	14.8	1.0	1.1	chr6	26259073	26260008	(144545971)	+	HERVK22-int	LTR/ERVK	4587	5293	(1544)	3354904
444	18.7	8.9	0.1	chr6	30101548	30101661	(140704318)	C	L1MC5a	LINE/L1	(2253)	524	413	3361071
254	23.0	10.3	2.6	chr6	35376219	35376370	(135429609)	C	L1MEi	LINE/L1	(1008)	1204	1040	3370234
306	28.9	8.1	2.9	chr6	35376355	35376600	(135429379)	C	L1MEd	LINE/L1	(6232)	854	595	3370239
834	24.2	2.1	2.9	chr6	37367128	37367370	(133438609)	C	MIR	SINE/MIR	(16)	246	6	3374566
2026	15.7	0.0	0.0	chr6	37367397	37367701	(133438278)	C	AluSx1	SINE/Alu	(5)	307	3	3374567
663	27.5	13.9	1.3	chr6	37597969	37598489	(133207490)	C	L1MEd	LINE/L1	(4886)	1339	707	3374971
288	32.4	5.2	1.4	chr6	37598521	37598542	(133207437)	C	L1MEd	LINE/L1	(6361)	725	705	3374971
5353	6.3	0.3	0.1	chr6	37598543	37599206	(133206773)	C	L1PA7	LINE/L1	(0)	6154	5490	3374972
2415	18.3	2.0	3.9	chr6	40313141	40313657	(130492322)	+	MLT2B2	LTR/ERVL	1	507	(8)	3379261
550	32.1	1.6	0.5	chr6	40313704	40313891	(130492088)	C	L1MEd	LINE/L1	(6334)	752	563	3379260
388	33.3	6.7	0.7	chr6	44578307	44578460	(126227519)	+	MIRb	SINE/MIR	14	177	(91)	3387438
656	21.7	4.7	0.0	chr6	44578572	44578732	(126227247)	C	MLT1N2	LTR/ERVL-MaLR	(13)	549	381	3387439
471	28.1	4.3	1.7	chr6	44578576	44578756	(126227223)	C	LTR67B	LTR/ERVL	(15)	605	420	3387440
677	22.5	2.7	2.1	chr6	52331738	52331882	(118474097)	+	LTR67B	LTR/ERVL	25	170	(450)	3398367
708	28.6	4.9	0.5	chr6	52331999	52332195	(118473784)	+	LTR67B	LTR/ERVL	412	617	(3)	3398367
1922	22.7	2.6	7.6	chr6	53578393	53578990	(117226989)	C	L1ME1	LINE/L1	(6)	6173	5596	3400385
20197	14.2	3.8	3.0	chr6	54438862	54441327	(116364652)	C	L1MA1	LINE/L1	(3960)	3605	1108	3401630
4862	14.8	0.8	3.1	chr6	54441329	54442141	(116363838)	C	LTR1A2	LTR/ERV1	(0)	837	44	3401632
262	31.7	1.9	8.0	chr6	61658028	61658140	(109147839)	C	L2c	LINE/L2	(0)	3387	3282	3408316
6796	10.2	1.8	2.1	chr6	64956013	64957750	(105848229)	+	L1MA2	LINE/L1	4564	6304	(0)	3412511
13054	23.6	3.2	3.4	chr6	66552977	66558900	(104247079)	C	L1PB4	LINE/L1	(2)	7573	1664	3414449
15	27.1	5.2	3.9	chr6	73248294	73248354	(97557625)	+	(TCCTCTC)n	Simple_repeat	1	62	(0)	3422962
48	4.8	4.6	0.0	chr6	73248355	73248419	(97557560)	+	(TC)n	Simple_repeat	1	68	(0)	3422963
15	27.1	5.2	3.9	chr6	73248420	73248454	(97557525)	+	(TCCTCTC)n	Simple_repeat	7	42	(0)	3422964
182	36.7	3.5	4.8	chr6	74124268	74124335	(96681644)	C	L2c	LINE/L2	(49)	3338	3273	3424627
946	29.2	9.7	2.1	chr6	74124336	74124772	(96681207)	+	LTR16B1	LTR/ERVL	5	478	(2)	3424628
292	24.7	4.3	6.3	chr6	79195958	79196052	(91609927)	C	L2c	LINE/L2	(4)	3383	3291	3430936
2063	14.7	1.1	3.2	chr6	79196091	79196462	(91609517)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3430937
683	25.3	4.6	0.0	chr6	80324197	80324362	(90481617)	+	MER5B	DNA/hAT-Charlie	4	177	(1)	3432497
254	26.6	7.4	0.9	chr6	80324381	80324494	(90481485)	C	L2	LINE/L2	(1461)	1958	1837	3432498
760	28.6	7.6	5.8	chr6	89959746	89960260	(80845719)	+	LTR33A	LTR/ERVL	1	503	(17)	3445716
10736	19.1	4.4	1.2	chr6	92507528	92510461	(78295518)	+	L1PA11	LINE/L1	1	3765	(3816)	3449014
549	29.8	0.6	5.1	chr6	102151938	102152114	(68653865)	C	MIRb	SINE/MIR	(57)	211	43	3461213
181	27.6	16.5	0.0	chr6	108141741	108141816	(62664163)	C	MIR	SINE/MIR	(119)	143	53	3470036
487	15.1	0.0	0.0	chr6	108142262	108142334	(62663645)	+	AluSx	SINE/Alu	61	133	(179)	3470037
27	0.0	0.0	0.0	chr6	113855011	113855036	(56950943)	+	(T)n	Simple_repeat	1	26	(0)	3479244
21	8.6	0.0	4.9	chr6	113855097	113855137	(56950842)	+	(CCCCG)n	Simple_repeat	1	41	(0)	3479245
17	25.1	0.0	7.4	chr6	113855186	113855266	(56950713)	+	(CCCCTC)n	Simple_repeat	1	81	(0)	3479246
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
658	24.3	6.0	2.6	chr6	119615400	119615730	(51190249)	C	L1MEd	LINE/L1	(5051)	1191	850	3486798
2382	23.7	11.6	2.2	chr6	121974511	121975296	(48830683)	C	HAL1M8	LINE/L1	(1455)	1536	647	3489824
5546	24.0	7.0	8.9	chr6	122253561	122255877	(48550102)	C	L1M3	LINE/L1	(625)	5553	3283	3490171
8100	18.7	1.9	2.0	chr6	125244860	125246499	(45559480)	C	L1PBa	LINE/L1	(5223)	1640	2	3494071
20	0.0	0.0	0.0	chr6	125301443	125301464	(45504515)	+	(AC)n	Simple_repeat	1	22	(0)	3494126
2950	17.0	2.2	1.1	chr6	130666851	130667390	(40138589)	+	MER89	LTR/ERV1	13	558	(1)	3501224
15	28.6	0.0	1.8	chr6	130667414	130667470	(40138509)	+	(TTATTTT)n	Simple_repeat	1	57	(0)	3501225
1250	20.1	10.6	1.1	chr6	130667570	130667842	(40138137)	+	AluJr	SINE/Alu	1	302	(10)	3501226
2203	13.1	0.6	1.3	chr6	132189269	132189582	(38616397)	+	AluSz	SINE/Alu	1	312	(0)	3503521
444	20.1	6.5	0.7	chr6	132189624	132189768	(38616211)	+	HAL1ME	LINE/L1	1000	1153	(1312)	3503522
1958	16.7	0.0	1.6	chr6	134102518	134102834	(36703145)	C	AluJo	SINE/Alu	(0)	312	1	3506177
2773	18.1	6.1	0.2	chr6	134102840	134103365	(36702614)	C	MER89	LTR/ERV1	(0)	559	1	3506178
13	11.6	2.2	8.7	chr6	134174939	134174983	(36630996)	+	(GCCTC)n	Simple_repeat	1	46	(0)	3506324
286	29.6	15.2	3.0	chr6	135170841	135171042	(35634937)	C	L2c	LINE/L2	(687)	2732	2502	3508066
16	32.1	1.4	0.0	chr6	138109822	138109890	(32696089)	+	A-rich	Low_complexity	1	70	(0)	3512471
628	25.3	3.0	0.0	chr6	138109938	138110099	(32695880)	C	MIR	SINE/MIR	(82)	180	14	3512472
6728	14.3	1.9	0.3	chr6	138129028	138130145	(32675834)	+	L1M1	LINE/L1	34	1169	(6396)	3512506
236	31.1	10.5	3.1	chr6	138832069	138832357	(31973622)	C	L1MEd	LINE/L1	(6046)	1040	728	3513640
6561	17.7	5.7	8.1	chr6	141076963	141078931	(29727048)	+	L1PB1	LINE/L1	258	2277	(4601)	3516821
25	9.1	0.0	0.0	chr6	142877959	142877993	(27927986)	+	(TG)n	Simple_repeat	1	35	(0)	3519093
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
24	12.0	2.1	2.0	chr6	143637326	143637373	(27168606)	+	GA-rich	Low_complexity	1	49	(0)	3520204
556	28.8	12.6	0.3	chr6	143637374	143637483	(27168496)	+	Charlie25	DNA/hAT-Charlie	578	707	(1817)	3520205
445	34.9	5.7	4.3	chr6	145551478	145551806	(25254173)	+	L1MEd	LINE/L1	406	739	(6347)	3522904
1327	27.5	10.5	2.9	chr6	145551875	145552744	(25253235)	+	L1MEd	LINE/L1	847	1790	(5296)	3522904
6236	26.0	5.2	5.2	chr6	146007867	146010228	(24795751)	C	L1ME3	LINE/L1	(5152)	2365	2	3523467
6309	8.9	1.4	0.5	chr6	146010263	146010913	(24795066)	C	L1PA14	LINE/L1	(9)	6152	5490	3523471
2500	17.2	8.4	2.3	chr6	148137477	148137999	(22667980)	C	MER89	LTR/ERV1	(1)	558	1	3526381
5265	22.0	0.7	2.8	chr6	150333485	150334582	(20471397)	C	ERVL-B4-int	LTR/ERVL	(4128)	1629	556	3530043
1754	14.1	0.6	6.9	chr6	150725539	150725888	(20080091)	C	L1M3	LINE/L1	(889)	5251	4924	3530641
2742	3.9	0.0	0.3	chr6	151372874	151373184	(19432795)	+	AluY	SINE/Alu	2	311	(0)	3531875
241	23.3	10.0	2.2	chr6	152474232	152474323	(18331656)	+	L1MEd	LINE/L1	229	328	(6948)	3533577
227	13.2	5.4	0.0	chr6	152474578	152474630	(18331349)	+	L1MEd	LINE/L1	895	950	(6326)	3533577
911	25.3	3.8	7.0	chr6	152474660	152475233	(18330746)	+	L1MEd	LINE/L1	1975	2554	(3765)	3533577
536	33.2	9.4	1.6	chr6	155319758	155320218	(15485761)	+	L2a	LINE/L2	2644	3160	(227)	3537965
15	13.9	0.0	0.0	chr6	155320298	155320321	(15485658)	+	(T)n	Simple_repeat	1	24	(0)	3537966
762	29.4	9.8	9.3	chr6	156878230	156878788	(13927191)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	1	3540134
15	26.6	0.0	4.1	chr6	157270019	157270067	(13535912)	+	(CA)n	Simple_repeat	1	49	(0)	3540643
202	23.1	3.0	1.2	chr6	157270154	157270710	(13535269)	+	(CCATCA)n	Simple_repeat	1	574	(0)	3540644
22	0.0	0.0	0.0	chr6	157277138	157277161	(13528818)	+	(GT)n	Simple_repeat	1	24	(0)	3540659
2730	27.4	14.3	3.8	chr6	157830767	157831845	(12974134)	C	L1MEd	LINE/L1	(5864)	1239	29	3541548
594	29.5	2.5	1.0	chr6	158272562	158272756	(12533223)	C	MIR	SINE/MIR	(57)	205	8	3542269
361	23.0	10.8	6.5	chr6	159441702	159441935	(11364044)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	244	3544079
358	27.9	3.7	0.0	chr6	159441999	159442127	(11363852)	C	MLT1H	LTR/ERVL-MaLR	(461)	134	1	3544079
2686	18.3	2.8	2.4	chr6	159722662	159723198	(11082781)	+	MER89	LTR/ERV1	1	539	(20)	3544498
747	19.8	8.1	4.0	chr6	159723199	159723398	(11082581)	C	L1ME1	LINE/L1	(36)	6143	5935	3544499
1109	19.0	4.7	0.9	chr6	159723410	159723596	(11082383)	C	L1MC4	LINE/L1	(1106)	6936	6748	3544500
429	29.1	2.6	1.9	chr6	163259031	163259213	(7546766)	C	MIRc	SINE/MIR	(79)	183	2	3549201
909	29.0	11.9	4.8	chr6	163592828	163593107	(7212872)	+	L1MEd	LINE/L1	490	763	(6340)	3549658
37	0.0	2.4	2.3	chr6	163593108	163593149	(7212830)	+	(TACAGA)n	Simple_repeat	1	43	(0)	3549659
909	29.0	11.9	4.8	chr6	163593150	163593639	(7212340)	+	L1MEd	LINE/L1	764	1322	(5781)	3549658
252	29.0	7.2	3.9	chr6	164815502	164815835	(5990144)	+	L1MEd	LINE/L1	887	1232	(5854)	3551212
383	24.0	10.1	2.3	chr6	164815939	164816066	(5989913)	+	MLT1I	LTR/ERVL-MaLR	73	211	(200)	3551213
1141	18.0	3.0	1.9	chr6	166108609	166108868	(4697111)	C	L1M4	LINE/L1	(807)	5339	5077	3552806
2868	26.0	4.7	1.8	chr6	166108893	166109948	(4696031)	C	L1MEf	LINE/L1	(756)	2321	888	3552807
4143	19.3	4.5	0.9	chr6	166110376	166111659	(4694320)	+	L1MB7	LINE/L1	4851	6179	(5)	3552810
706	27.8	14.2	2.0	chr6	167190900	167191261	(3614718)	C	L1MEd	LINE/L1	(5858)	1245	817	3554134
242	23.8	0.0	1.6	chr6	167191447	167191510	(3614469)	+	MERX	DNA/TcMar-Tigger	307	369	(387)	3554138
252	30.4	1.8	0.9	chr6	167191597	167191709	(3614270)	C	L1MEd	LINE/L1	(6647)	456	343	3554134
544	31.0	12.2	0.8	chr6	167363179	167363555	(3442424)	+	L1MEd	LINE/L1	31	456	(6647)	3554328
264	22.2	0.0	1.6	chr6	167363642	167363705	(3442274)	C	MERX	DNA/TcMar-Tigger	(387)	369	307	3554329
593	25.7	16.0	3.6	chr6	167363933	167364236	(3441743)	+	L1MEd	LINE/L1	871	1244	(5859)	3554328
439	32.1	2.4	1.5	chr6	167482293	167482457	(3323522)	C	MIR	SINE/MIR	(100)	162	1	3554465
5319	8.5	5.2	0.0	chr6	167482610	167483349	(3322630)	C	MER4E1	LTR/ERV1	(0)	781	1	3554466
388	35.6	4.6	3.7	chr6	168614431	168615747	(2190232)	+	TAR1	Satellite/telo	1	1328	(552)	3555632
553	35.4	8.2	2.4	chr7	1175828	1176361	(158169612)	C	ERV3-16A3_I-int	LTR/ERVL	(2364)	2632	2061	3559429
832	33.6	2.5	3.6	chr7	1176516	1176956	(158169017)	C	ERV3-16A3_I-int	LTR/ERVL	(3551)	1675	1240	3559429
2323	13.1	0.0	0.0	chr7	2674986	2675297	(156670676)	C	AluSx	SINE/Alu	(0)	312	1	3561821
378	35.3	5.5	0.0	chr7	2675317	2675489	(156670484)	C	MLT1J1	LTR/ERVL-MaLR	(265)	183	1	3561822
264	32.2	0.0	4.0	chr7	2675570	2675695	(156670278)	C	L1MEg	LINE/L1	(5463)	621	501	3561820
1960	13.7	0.0	3.0	chr7	2675751	2675870	(156670103)	+	AluJr	SINE/Alu	3	122	(190)	3561823
1968	28.0	13.0	7.1	chr7	3311725	3313126	(156032847)	+	L1MEd	LINE/L1	45	1533	(5553)	3563121
601	23.9	15.2	0.9	chr7	4978524	4978865	(154367108)	C	L1MEd	LINE/L1	(6005)	1081	682	3565969
2024	11.7	1.7	0.0	chr7	4978993	4979283	(154366690)	C	AluSz	SINE/Alu	(15)	297	2	3565970
1011	14.8	0.0	0.0	chr7	4979290	4979493	(154366480)	C	AluSq	SINE/Alu	(0)	313	136	3565971
17	13.3	7.1	0.0	chr7	6590130	6590171	(152755802)	+	(GCAG)n	Simple_repeat	1	45	(0)	3569752
1519	7.5	4.2	0.8	chr7	6590230	6590483	(152755490)	+	Charlie17b	DNA/hAT-Charlie	158	420	(784)	3569753
441	12.2	4.9	2.2	chr7	11179791	11180706	(148165267)	+	(ATATATT)n	Simple_repeat	1	961	(0)	3575882
1486	15.6	5.2	0.0	chr7	11180707	11181014	(148164959)	C	L1MB2	LINE/L1	(919)	5221	4897	3575881
1049	22.6	3.6	0.0	chr7	11758755	11758966	(147587007)	C	MER58A	DNA/hAT-Charlie	(1)	223	4	3576574
1296	32.7	11.4	2.7	chr7	11758967	11759660	(147586313)	+	L1MEd	LINE/L1	520	1307	(5779)	3576573
783	22.0	6.5	6.1	chr7	23618882	23619109	(135726864)	C	HAL1	LINE/L1	(1775)	732	504	3592730
816	6.5	0.0	3.7	chr7	23619183	23619306	(135726667)	+	L1PA10	LINE/L1	6008	6127	(47)	3592737
17300	4.2	0.3	0.0	chr7	23619590	23622468	(135723505)	C	L1PA5	LINE/L1	(8)	6146	3264	3592738
9310	21.3	8.6	2.3	chr7	24616455	24618953	(134727020)	C	L1MA5A	LINE/L1	(3780)	3782	778	3594167
226	26.3	0.0	1.3	chr7	24618951	24619027	(134726946)	C	L1M3	LINE/L1	(2869)	3271	3196	3594169
4708	11.5	4.8	0.4	chr7	25023064	25023797	(134322176)	C	L1PB3	LINE/L1	(0)	6154	5387	3594766
12024	6.7	3.3	0.0	chr7	27856048	27857574	(131488399)	C	LTR12C	LTR/ERV1	(0)	1579	1	3599147
441	30.9	11.3	0.0	chr7	30770743	30770930	(128575043)	+	MIRb	SINE/MIR	55	266	(2)	3603650
272	35.8	4.2	0.0	chr7	30771107	30771243	(128574730)	C	MIRb	SINE/MIR	(76)	192	50	3603651
11	23.9	4.5	0.0	chr7	35801027	35801070	(123544903)	+	(GAGCGG)n	Simple_repeat	1	46	(0)	3611238
20	30.8	3.2	1.0	chr7	35801370	35801462	(123544511)	+	(GGC)n	Simple_repeat	1	96	(0)	3611239
2017	16.7	0.0	0.3	chr7	44997854	44998159	(114347814)	+	AluJo	SINE/Alu	2	306	(6)	3625314
1518	14.0	8.1	0.7	chr7	44998177	44998463	(114347510)	+	MER89	LTR/ERV1	240	549	(10)	3625315
2132	17.0	0.0	6.2	chr7	45342126	45342546	(114003427)	C	MER47B	DNA/TcMar-Tigger	(12)	406	12	3625826
2759	22.7	3.5	3.6	chr7	45342558	45343752	(114002221)	+	L1MC3	LINE/L1	4836	6020	(1765)	3625825
2520	17.0	6.4	0.6	chr7	45683033	45683921	(113662052)	C	ERVL-B4-int	LTR/ERVL	(1583)	4131	3191	3626220
390	25.2	5.6	2.2	chr7	47792305	47792442	(111553531)	C	L1M7	LINE/L1	(6075)	143	1	3629090
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
1388	31.1	14.7	3.3	chr7	69261626	69261833	(90084140)	+	L2a	LINE/L2	1833	2073	(1346)	3656265
2227	11.9	0.3	0.0	chr7	69261834	69262128	(90083845)	C	AluSg	SINE/Alu	(13)	297	2	3656266
1926	16.0	0.7	0.7	chr7	69607926	69608232	(89737741)	C	AluJb	SINE/Alu	(4)	308	2	3657080
2658	17.6	1.1	15.1	chr7	72080071	72080434	(87265539)	+	LTR31	LTR/ERV1	273	617	(2)	3661563
259	25.0	8.9	0.0	chr7	72080439	72080530	(87265443)	+	L2a	LINE/L2	3321	3421	(5)	3661565
388	13.2	0.0	0.0	chr7	74530496	74530548	(84815425)	C	FLAM_A	SINE/Alu	(3)	139	87	3667316
371	15.4	0.0	0.0	chr7	74530555	74530606	(84815367)	+	7SLRNA	srpRNA	269	320	(0)	3667317
291	16.4	0.0	0.0	chr7	74530797	74530851	(84815122)	+	MIR	SINE/MIR	71	125	(137)	3667318
1494	13.0	0.5	0.5	chr7	74530867	74531081	(84814892)	+	AluJr	SINE/Alu	81	295	(17)	3667319
1847	9.5	0.0	0.0	chr7	75074130	75074360	(84271613)	C	AluSz	SINE/Alu	(81)	231	1	3668726
4435	3.7	0.2	0.0	chr7	77304654	77305135	(82040838)	C	LTR2B	LTR/ERV1	(0)	483	1	3673578
11787	10.7	3.1	0.9	chr7	77305136	77307428	(82038545)	C	L1MA5A	LINE/L1	(3910)	2954	253	3673571
1672	25.6	2.0	2.3	chr7	80681496	80681938	(78664035)	+	LTR102_Mam	LTR/ERVL	399	840	(11)	3678499
406	27.2	17.2	1.4	chr7	88524552	88524771	(70821202)	+	MIR	SINE/MIR	1	262	(0)	3688678
54	15.2	2.2	4.3	chr7	88524772	88524790	(70821183)	+	(TATAC)n	Simple_repeat	4	22	(0)	3688679
423	31.8	7.9	1.1	chr7	90402900	90403077	(68942896)	C	MIR	SINE/MIR	(52)	210	20	3691025
13	15.5	5.6	0.0	chr7	90403208	90403243	(68942730)	+	(TTTTG)n	Simple_repeat	1	38	(0)	3691026
13	22.2	5.9	1.9	chr7	95207198	95207248	(64138725)	+	GA-rich	Low_complexity	1	54	(0)	3697634
1640	29.6	12.9	8.0	chr7	96577129	96578664	(62767309)	+	L1MEd	LINE/L1	83	1711	(5375)	3699567
252	24.8	11.0	2.4	chr7	96860977	96861100	(62484873)	C	MLT1I	LTR/ERVL-MaLR	(25)	386	251	3699950
570	26.5	17.9	2.7	chr7	96861414	96861747	(62484226)	C	HAL1ME	LINE/L1	(686)	1779	1384	3699947
399	34.3	3.6	0.0	chr7	98925868	98926083	(60419890)	+	L1MEg	LINE/L1	715	938	(6165)	3703716
1096	26.3	13.3	1.2	chr7	98926105	98926692	(60419281)	+	L1MEg	LINE/L1	1075	1744	(4498)	3703716
29	10.0	5.7	4.0	chr7	105876591	105876663	(53469310)	+	G-rich	Low_complexity	1	74	(0)	3716733
17	10.3	0.0	3.0	chr7	105876749	105876781	(53469192)	+	(CGCC)n	Simple_repeat	1	33	(0)	3716734
7984	18.2	1.2	0.9	chr7	111796380	111798534	(47547439)	+	HUERS-P3-int	LTR/ERV1	822	3284	(5635)	3724857
53	7.5	0.0	0.0	chr7	113086375	113086444	(46259529)	+	(T)n	Simple_repeat	1	70	(0)	3726684
24	14.0	2.1	0.0	chr7	113086566	113086612	(46259361)	+	(GGC)n	Simple_repeat	1	48	(0)	3726685
808	29.8	8.4	0.9	chr7	113289690	113290130	(46055843)	C	L1MEd	LINE/L1	(6058)	1028	552	3726949
2339	12.3	0.0	0.0	chr7	113290136	113290445	(46055528)	+	AluSx	SINE/Alu	1	310	(2)	3726950
858	16.7	0.0	2.2	chr7	116927086	116927223	(42418750)	+	FLAM_C	SINE/Alu	1	135	(8)	3731780
12	12.5	0.0	0.0	chr7	116927224	116927241	(42418732)	+	(AAAG)n	Simple_repeat	1	18	(0)	3731781
247	24.5	16.2	0.0	chr7	116927261	116927358	(42418615)	+	MLT1J	LTR/ERVL-MaLR	351	467	(45)	3731782
449	31.1	2.8	0.6	chr7	124662417	124662594	(34683379)	+	Plat_L3	LINE/CR1	3197	3378	(208)	3742143
367	33.7	9.1	2.6	chr7	124857264	124857325	(34488648)	+	MIR	SINE/MIR	12	72	(190)	3742417
4462	16.9	8.7	0.7	chr7	124857326	124858151	(34487822)	+	LTR1D1	LTR/ERV1	2	899	(0)	3742418
529	15.6	1.0	2.0	chr7	128410770	128410867	(30935106)	+	MER47C	DNA/TcMar-Tigger	1	97	(0)	3747162
555	23.8	4.7	1.6	chr7	130341619	130341802	(29004171)	C	L1MEd	LINE/L1	(5113)	1990	1801	3751007
277	32.1	0.0	1.2	chr7	130341831	130341912	(29004061)	+	L1MEd	LINE/L1	452	532	(6554)	3751009
233	24.1	1.8	0.0	chr7	130341937	130341990	(29003983)	C	MERX	DNA/TcMar-Tigger	(395)	361	307	3751010
626	28.0	9.3	2.6	chr7	130341991	130342302	(29003671)	+	L1MEd	LINE/L1	613	947	(6139)	3751009
421	23.3	13.8	2.6	chr7	130342309	130342462	(29003511)	C	MER104	DNA/TcMar-Tc2	(1)	180	7	3751011
505	21.2	16.2	0.0	chr7	130359209	130359378	(28986595)	C	MIRc	SINE/MIR	(44)	224	22	3751041
353	31.4	8.2	13.6	chr7	132375436	132375910	(26970063)	C	L2b	LINE/L2	(1)	3386	2920	3754309
422	35.1	5.2	2.9	chr7	132375982	132376189	(26969784)	+	MIRc	SINE/MIR	54	266	(2)	3754310
326	33.1	2.1	7.9	chr7	132518137	132518339	(26827634)	+	MamSINE1	SINE/tRNA-RTE	67	257	(33)	3754515
13	25.5	0.0	9.5	chr7	134127159	134127242	(25218731)	+	A-rich	Low_complexity	1	84	(0)	3757000
6457	18.9	2.9	1.8	chr7	138132519	138134150	(21211823)	C	L1MA9	LINE/L1	(557)	7221	5505	3762952
1526	19.2	6.1	5.6	chr7	138556758	138557278	(20788695)	C	LTR4	LTR/ERV1	(0)	596	26	3763836
49084	15.0	2.7	1.4	chr7	138557290	138565603	(20780370)	C	HERV3-int	LTR/ERV1	(0)	8426	1	3763836
12	17.6	0.0	0.0	chr7	138935346	138935372	(20410601)	+	(TTTTG)n	Simple_repeat	1	27	(0)	3764574
313	27.9	1.2	0.0	chr7	139018848	139018926	(20327047)	+	MLT1I	LTR/ERVL-MaLR	61	140	(271)	3764743
624	25.3	8.6	0.0	chr7	139018961	139019130	(20326843)	+	MLT1I	LTR/ERVL-MaLR	219	404	(7)	3764743
916	29.2	8.3	2.2	chr7	142742819	142743326	(16602647)	C	L1MEd	LINE/L1	(5950)	1136	595	3770957
2017	14.3	11.7	1.1	chr7	145475345	145475725	(13870248)	+	MSTA	LTR/ERVL-MaLR	1	427	(1)	3774677
289	30.7	3.1	8.2	chr7	149239209	149239324	(10106649)	+	Tigger16b	DNA/TcMar-Tigger	195	312	(24)	3780358
15	0.0	0.0	0.0	chr7	149239672	149239690	(10106283)	+	(CGG)n	Simple_repeat	1	19	(0)	3780360
3837	26.0	8.8	7.9	chr7	149467610	149468531	(9877442)	C	L1MEd	LINE/L1	(5799)	1304	420	3780742
1374	22.0	6.4	12.2	chr7	149468532	149468981	(9876992)	+	ERV3-16A3_LTR	LTR/ERVL	1	422	(0)	3780745
369	31.1	11.1	0.0	chr7	149855500	149855676	(9490297)	C	LTR78	LTR/ERV1	(436)	868	670	3781246
346	32.9	1.4	1.4	chr7	149855721	149855865	(9490108)	C	LTR78	LTR/ERV1	(715)	589	445	3781246
3068	29.1	10.9	5.2	chr7	149856230	149858370	(9487603)	C	HAL1	LINE/L1	(183)	2324	48	3781247
205	35.9	4.9	4.3	chr7	151152692	151152854	(8193119)	C	L3b	LINE/CR1	(15)	5217	5054	3782966
2077	9.8	3.5	0.0	chr7	151805917	151806193	(7539780)	+	AluSx1	SINE/Alu	1	287	(25)	3784064
548	27.9	6.2	0.6	chr7	151806382	151806547	(7539426)	+	Charlie19a	DNA/hAT-Charlie	43	218	(168)	3784065
10030	9.3	10.7	1.6	chr7	151973482	151973793	(7372180)	+	THE1D-int	LTR/ERVL-MaLR	1322	1631	(0)	3784346
2206	11.1	5.5	1.4	chr7	151973794	151974158	(7371815)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3784346
844	22.3	11.7	0.0	chr7	152674851	152675047	(6670926)	+	MER58A	DNA/hAT-Charlie	1	223	(1)	3785717
731	35.4	2.5	0.3	chr7	156227249	156227596	(3118377)	+	L1MEd	LINE/L1	450	805	(6281)	3790651
489	30.6	4.0	0.0	chr7	156227623	156227792	(3118181)	C	L2	LINE/L2	(722)	2697	2521	3790652
308	31.7	7.0	5.1	chr7	157065190	157065425	(2280548)	+	MLT1O	LTR/ERVL-MaLR	137	377	(165)	3791795
1907	20.5	14.6	2.0	chr7	157099219	157099760	(2246213)	+	LTR26E	LTR/ERV1	1	622	(0)	3791850
180	15.6	0.0	0.0	chr7	157319717	157319748	(2026225)	C	L3	LINE/CR1	(142)	3957	3926	3792277
2299	12.7	0.0	0.0	chr7	157802957	157803264	(1542709)	C	AluSx1	SINE/Alu	(4)	308	1	3792756
3041	19.0	3.2	8.9	chr7	157803265	157803849	(1542124)	C	L1MB1	LINE/L1	(896)	5272	4714	3792755
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
10475	19.0	9.3	0.9	chr8	474894	477457	(144661179)	C	L1M3	LINE/L1	(894)	5246	2446	3794867
330	20.9	15.3	0.9	chr8	477500	477605	(144661031)	+	L1MC5	LINE/L1	9107	9230	(74)	3794868
779	24.4	9.7	1.9	chr8	477629	477895	(144660741)	C	MER58B	DNA/hAT-Charlie	(27)	314	25	3794869
983	16.2	2.0	8.1	chr8	6736152	6736327	(138402309)	C	L1MD3	LINE/L1	(82)	7913	7745	3802519
606	33.3	9.5	5.4	chr8	11099643	11099994	(134038642)	C	L2b	LINE/L2	(0)	3375	3008	3809096
1977	15.6	0.0	1.0	chr8	11100041	11100342	(134038294)	C	AluJb	SINE/Alu	(1)	311	13	3809097
2241	12.0	0.3	0.3	chr8	14994302	14994609	(130144027)	+	AluSq	SINE/Alu	1	308	(5)	3814763
262	27.6	4.4	2.2	chr8	14994663	14994751	(130143885)	+	L2a	LINE/L2	3336	3426	(0)	3814764
1787	17.4	0.0	5.0	chr8	19790713	19791029	(125347607)	+	AluJb	SINE/Alu	1	301	(11)	3821787
4273	10.9	3.0	0.0	chr8	19791189	19791803	(125346833)	+	MER51A	LTR/ERV1	1	634	(0)	3821788
310	21.2	2.9	0.0	chr8	29208625	29208690	(115929946)	+	MER89	LTR/ERV1	2	69	(490)	3837524
1281	25.6	2.3	0.0	chr8	29208696	29209035	(115929601)	+	MER89	LTR/ERV1	212	559	(0)	3837524
1878	12.9	8.2	3.6	chr8	30312268	30312566	(114826070)	+	THE1D	LTR/ERVL-MaLR	1	318	(63)	3839515
2906	7.3	0.0	0.0	chr8	30312567	30312921	(114825715)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3839516
703	24.6	14.2	9.4	chr8	37152878	37153290	(107985346)	C	LTR16	LTR/ERVL	(1)	437	2	3849907
655	28.4	38.0	2.6	chr8	41177646	41177933	(103960703)	C	L1MEd	LINE/L1	(6218)	868	488	3856572
1163	15.9	1.0	0.0	chr8	41753541	41753747	(103384889)	C	L1PA16	LINE/L1	(9)	6157	5949	3857531
393	34.0	6.7	3.4	chr8	41753770	41754156	(103384480)	+	L2c	LINE/L2	2918	3318	(69)	3857528
1245	24.5	11.9	2.8	chr8	41918933	41919426	(103219210)	C	L1MC5a	LINE/L1	(204)	2573	2115	3857834
789	24.2	12.6	2.7	chr8	41919426	41919451	(103219185)	C	L1ME3B	LINE/L1	(3203)	3116	3092	3857830
7427	6.2	12.9	6.0	chr8	47286939	47288110	(97850526)	C	MER11A	LTR/ERVK	(0)	1266	1	3861736
21173	14.7	4.3	1.9	chr8	48098924	48101235	(97037401)	C	L1MA2	LINE/L1	(5136)	2429	14	3862943
1969	15.2	2.2	1.3	chr8	55735070	55735378	(89403258)	+	AluJb	SINE/Alu	1	312	(0)	3872783
893	13.6	7.7	5.5	chr8	55735390	55735591	(89403045)	+	L1PA16	LINE/L1	5951	6157	(9)	3872784
1373	27.4	11.6	10.3	chr8	55757137	55758532	(89380104)	+	L1MCc	LINE/L1	44	1467	(4956)	3872839
426	30.5	11.8	6.5	chr8	57012597	57013228	(88125408)	C	L1MEd	LINE/L1	(5825)	1261	585	3874738
8101	19.6	4.5	2.4	chr8	57013229	57014945	(88123691)	C	MER52A	LTR/ERV1	(0)	1755	1	3874739
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
1485	28.3	1.5	2.6	chr8	57214477	57215085	(87923551)	C	MER50	LTR/ERV1	(123)	611	10	3874995
5805	11.3	13.8	1.5	chr8	57597202	57598283	(87540353)	+	MER11B	LTR/ERVK	1	1236	(0)	3875530
305	33.8	9.2	2.5	chr8	58401743	58402211	(86736425)	+	L2c	LINE/L2	2644	3164	(223)	3876536
9146	9.1	11.7	0.1	chr8	59761098	59762492	(85376144)	C	LTR12C	LTR/ERV1	(0)	1579	3	3878305
438	26.8	9.1	0.9	chr8	60112753	60112985	(85025651)	+	L1ME2z	LINE/L1	6189	6442	(2)	3878688
380	29.0	10.6	0.0	chr8	60112991	60113176	(85025460)	C	L1MEd	LINE/L1	(6201)	902	695	3878684
26	0.0	0.0	0.0	chr8	69832995	69833019	(75305617)	+	(CCG)n	Simple_repeat	1	25	(0)	3892657
831	28.9	13.2	1.2	chr8	71802121	71802661	(73335975)	C	L2a	LINE/L2	(4)	3422	2789	3895701
260	27.6	7.5	7.0	chr8	71802712	71802898	(73335738)	+	LTR85b	LTR/Gypsy?	258	445	(339)	3895702
298	30.0	13.7	4.5	chr8	71803177	71803441	(73335195)	C	L2c	LINE/L2	(178)	3209	2917	3895700
27506	2.6	0.3	0.0	chr8	74594236	74600252	(70538384)	C	L1PA3	LINE/L1	(2)	6153	126	3899866
447	28.4	3.1	4.3	chr8	74743808	74744039	(70394597)	+	L1MEd	LINE/L1	640	868	(6218)	3900056
1935	16.3	0.0	1.0	chr8	74990997	74991290	(70147346)	C	AluSz	SINE/Alu	(16)	296	6	3900399
1721	15.5	1.9	0.0	chr8	74991575	74991825	(70146811)	C	AluSx	SINE/Alu	(56)	256	1	3900400
331	35.7	9.8	1.1	chr8	74991829	74992089	(70146547)	+	L2c	LINE/L2	3098	3383	(4)	3900401
1226	13.7	5.9	0.0	chr8	79738180	79738369	(65400267)	C	MER3	DNA/hAT-Charlie	(0)	209	8	3906423
303	20.8	0.0	0.0	chr8	80174892	80174944	(64963692)	C	Zaphod	DNA/hAT-Tip100	(1)	4030	3978	3907154
877	15.2	4.7	6.6	chr8	80175314	80175404	(64963232)	C	MER53	DNA/hAT	(0)	193	110	3907155
417	22.4	7.0	5.9	chr8	81315798	81316029	(63822607)	C	MLT1H1	LTR/ERVL-MaLR	(54)	495	195	3909106
293	31.4	0.0	2.9	chr8	81316063	81316167	(63822469)	C	LTR38A1	LTR/ERV1	(19)	524	423	3909107
27588	2.4	0.1	0.0	chr8	81768217	81774242	(63364394)	+	L1PA2	LINE/L1	126	6155	(0)	3909762
1483	28.0	4.6	1.6	chr8	83911202	83911697	(61226939)	+	LOR1-int	LTR/ERV1	5	565	(1221)	3912434
1939	12.4	6.3	3.0	chr8	83989005	83989371	(61149265)	+	THE1D	LTR/ERVL-MaLR	2	381	(0)	3912543
9953	10.6	0.1	0.7	chr8	85742400	85743923	(59394713)	C	L1P1	LINE/L1	(2125)	4021	2507	3914963
21081	12.1	0.6	1.2	chr8	92330611	92333767	(52804869)	C	L1PA11	LINE/L1	(1110)	6471	3334	3923735
2019	13.5	6.8	1.1	chr8	92333768	92334126	(52804510)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3923737
9838	23.1	3.9	3.3	chr8	92334127	92336931	(52801705)	C	L1PA11	LINE/L1	(4270)	3333	1	3923735
359	24.0	4.8	0.0	chr8	93528460	93528559	(51610077)	C	ERV3-16A3_I-int	LTR/ERVL	(3831)	1395	1291	3925339
1685	20.1	5.7	0.3	chr8	93528561	93528924	(51609712)	C	MER89	LTR/ERV1	(1)	558	174	3925343
1720	11.6	2.3	5.0	chr8	94309840	94310168	(50828468)	C	MER50	LTR/ERV1	(0)	697	433	3926632
1450	13.3	0.9	0.0	chr8	94310163	94310387	(50828249)	C	MER50	LTR/ERV1	(505)	229	3	3926632
208	30.9	7.5	4.5	chr8	94950150	94950305	(50188331)	+	MIRc	SINE/MIR	64	224	(44)	3927880
970	26.5	5.2	8.2	chr8	94985003	94985415	(50153221)	+	MLT1L	LTR/ERVL-MaLR	84	568	(42)	3927957
21328	12.4	2.7	1.2	chr8	97475110	97482067	(47656569)	+	L1PA16	LINE/L1	6	6869	(0)	3931790
816	31.9	11.7	1.4	chr8	101036822	101037165	(44101471)	+	MLT1J	LTR/ERVL-MaLR	22	405	(107)	3938031
237	34.1	9.3	4.0	chr8	101696202	101696476	(43442160)	C	L2c	LINE/L2	(0)	3387	3097	3939194
659	18.3	0.0	0.0	chr8	102403681	102403784	(42734852)	C	AluSg7	SINE/Alu	(14)	295	192	3940248
1469	20.3	6.2	3.1	chr8	102403788	102404147	(42734489)	+	L1ME1	LINE/L1	5798	6169	(10)	3940237
1857	16.8	2.7	0.0	chr8	102669376	102669666	(42468970)	+	AluJb	SINE/Alu	1	299	(13)	3940857
264	28.4	4.9	5.7	chr8	102669804	102669926	(42468710)	+	L2c	LINE/L2	3266	3387	(0)	3940858
5584	13.1	13.8	0.4	chr8	105215897	105216944	(39921692)	+	MER11B	LTR/ERVK	1	1211	(25)	3944856
1866	24.9	10.9	5.7	chr8	106971051	106972112	(38166524)	C	L1ME3F	LINE/L1	(5292)	1811	698	3947344
1638	22.5	4.7	1.1	chr8	112708739	112709107	(32429529)	+	MER89	LTR/ERV1	175	557	(2)	3955169
10760	11.2	1.0	0.3	chr8	113768888	113770455	(31368181)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3956549
10313	11.6	4.2	0.1	chr8	116372768	116374282	(28764354)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3959936
589	29.8	6.1	5.0	chr8	120106396	120106752	(25031884)	C	L1MC4a	LINE/L1	(6109)	994	634	3966084
257	27.4	0.0	0.0	chr8	120106759	120106809	(25031827)	+	MERX	DNA/TcMar-Tigger	310	360	(396)	3966085
318	33.3	9.7	7.0	chr8	120106982	120107323	(25031313)	C	L1MC4a	LINE/L1	(6697)	406	55	3966084
1506	23.5	9.7	9.6	chr8	120215429	120215986	(24922650)	C	L2a	LINE/L2	(527)	2892	2351	3966279
864	23.2	11.0	2.2	chr8	121506413	121506685	(23631951)	+	MER74B	LTR/ERVL	323	622	(0)	3968343
351	23.8	17.7	1.1	chr8	124301159	124301341	(20837295)	+	MLT1J	LTR/ERVL-MaLR	7	226	(286)	3973480
337	30.7	8.8	3.3	chr8	137890247	137890428	(7248208)	+	L2a	LINE/L2	3205	3397	(29)	3997843
406	32.6	10.9	1.6	chr8	142564318	142564691	(2573945)	+	L1MEd	LINE/L1	734	1146	(5957)	4005053
11	33.6	0.0	0.0	chr8	143568578	143568626	(1570010)	+	(GCAGCA)n	Simple_repeat	1	49	(0)	4006348
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
1701	19.8	5.6	3.7	chr8	144837928	144838363	(300273)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	23	4008182
2287	8.6	0.0	0.0	chr8	144838662	144838962	(299674)	+	AluY	SINE/Alu	2	302	(9)	4008183
841	28.1	8.0	0.4	chr9	2254999	2255262	(136139455)	C	LTR33A_	LTR/ERVL	(0)	531	246	4011874
616	19.5	8.6	0.7	chr9	3940938	3941087	(134453630)	+	MER5A	DNA/hAT-Charlie	2	164	(25)	4014298
977	28.4	4.6	7.5	chr9	6160490	6161213	(132233504)	C	L1MEd	LINE/L1	(5691)	1395	694	4017616
14	23.3	0.0	4.1	chr9	6161305	6161353	(132233364)	+	(TGTCTT)n	Simple_repeat	1	49	(0)	4017617
399	32.3	11.6	2.5	chr9	6161369	6161694	(132233023)	C	MLT1O	LTR/ERVL-MaLR	(163)	379	24	4017618
364	27.7	1.7	11.9	chr9	14446738	14447057	(123947660)	C	L1MC5a	LINE/L1	(9)	2768	2482	4028995
865	31.7	5.0	2.5	chr9	14447085	14447573	(123947144)	C	L1ME3D	LINE/L1	(6139)	964	463	4028994
433	31.0	4.0	1.4	chr9	15402998	15403144	(122991573)	+	MamRTE1	LINE/RTE-BovB	3047	3197	(615)	4030481
232	27.0	22.7	1.6	chr9	15403160	15403287	(122991430)	C	MIR3	SINE/MIR	(21)	187	25	4030482
4896	8.8	1.8	2.0	chr9	31770537	31771654	(106623063)	+	MER11A	LTR/ERVK	1	1266	(0)	4052850
1732	15.0	6.2	0.4	chr9	33724129	33724402	(104670315)	+	AluJb	SINE/Alu	1	291	(21)	4055878
29	0.0	0.0	0.0	chr9	33724403	33724427	(104670290)	+	(AT)n	Simple_repeat	1	25	(0)	4055879
1121	30.9	8.8	3.0	chr9	33788786	33789556	(104605161)	C	L1MEd	LINE/L1	(5950)	1136	317	4055983
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
2846	29.2	5.0	5.5	chr9	61859197	61861207	(76533510)	+	SST1	Satellite/centr	1	1999	(867)	4072483
54	29.2	1.5	2.5	chr9	62801310	62801506	(75593211)	+	GA-rich	Low_complexity	1	200	(0)	4073674
415	28.0	2.0	1.0	chr9	63817237	63817537	(74577180)	+	LSAU	Satellite	1	303	(172)	4074767
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
211	33.8	2.4	0.0	chr9	70983364	70983443	(67411274)	+	L2	LINE/L2	2376	2457	(962)	4084031
2148	21.7	7.0	0.0	chr9	70983493	70984012	(67410705)	C	MER89	LTR/ERV1	(0)	559	1	4084033
12914	17.8	5.1	1.8	chr9	75262408	75264818	(63129899)	C	L1M1	LINE/L1	(5051)	2514	19	4090782
3195	25.6	11.3	6.6	chr9	75829957	75830723	(62563994)	+	HAL1	LINE/L1	873	1640	(867)	4091504
5300	24.1	8.5	5.5	chr9	75830847	75832908	(62561809)	C	Charlie2a	DNA/hAT-Charlie	(194)	2667	529	4091509
1845	30.1	5.6	1.3	chr9	76273971	76274723	(62119994)	C	L1MEd	LINE/L1	(5852)	1234	448	4092193
1448	20.0	11.4	3.7	chr9	76274749	76275096	(62119621)	C	MSTB	LTR/ERVL-MaLR	(0)	426	49	4092194
448	27.7	5.5	0.0	chr9	78004521	78004674	(60390043)	+	LTR16C	LTR/ERVL	270	432	(57)	4095113
5643	26.1	5.4	0.5	chr9	78156106	78158353	(60236364)	C	L1ME1	LINE/L1	(1923)	4396	2040	4095339
2758	18.3	3.4	0.7	chr9	79788488	79789031	(58605686)	C	MER89	LTR/ERV1	(0)	559	1	4097759
446	30.1	4.0	8.1	chr9	79929572	79929807	(58464910)	C	MIR	SINE/MIR	(36)	226	3	4097948
233	39.3	6.4	1.0	chr9	80021187	80021379	(58373338)	C	LTR88b	LTR/Gypsy?	(348)	489	286	4098082
2546	8.8	0.0	0.0	chr9	81509119	81509424	(56885293)	+	AluYk2	SINE/Alu	1	306	(5)	4100003
1428	26.2	14.0	0.9	chr9	81509434	81510015	(56884702)	+	HAL1M8	LINE/L1	4	674	(2317)	4100004
348	27.3	2.2	2.3	chr9	81510051	81510208	(56884509)	+	L1MEg	LINE/L1	1872	2028	(5058)	4100005
857	31.5	14.1	5.0	chr9	85091374	85092024	(53302693)	C	L2b	LINE/L2	(1008)	2411	1677	4105699
266	34.0	1.0	2.0	chr9	85340688	85340786	(53053931)	+	MIR3	SINE/MIR	58	155	(53)	4106073
2481	27.2	4.4	0.8	chr9	85340803	85341599	(53053118)	C	HAL1M8	LINE/L1	(2157)	834	8	4106074
2471	20.6	1.4	5.1	chr9	87393020	87393552	(51001165)	+	MER89	LTR/ERV1	1	513	(46)	4109398
759	18.2	4.3	1.3	chr9	87393603	87393758	(51000959)	+	MER5A	DNA/hAT-Charlie	27	187	(2)	4109399
19	19.9	1.8	3.5	chr9	87800014	87800069	(50594648)	+	(TCCC)n	Simple_repeat	1	57	(0)	4110016
283	30.4	11.6	1.8	chr9	89222090	89222260	(49172457)	C	MLT1J	LTR/ERVL-MaLR	(214)	298	109	4112252
17	28.4	0.0	4.1	chr9	92809484	92809556	(45585161)	+	(GGATTT)n	Simple_repeat	1	73	(0)	4117251
758	31.7	3.6	1.6	chr9	92931684	92932061	(45462656)	C	L1MEc	LINE/L1	(5993)	1029	644	4117423
707	28.8	4.2	2.0	chr9	92932058	92932404	(45462313)	C	L1MEd	LINE/L1	(6141)	945	591	4117427
803	31.4	10.8	5.3	chr9	96304136	96304962	(42089755)	C	L1MEd	LINE/L1	(6052)	1034	157	4122595
1909	23.7	6.3	1.5	chr9	98156339	98156646	(40238071)	C	L1MEd	LINE/L1	(3063)	3083	2766	4125936
619	26.2	8.7	0.5	chr9	98156664	98156874	(40237843)	C	L1MEd	LINE/L1	(6297)	806	577	4125936
303	27.9	0.0	0.0	chr9	98156938	98157016	(40237701)	C	MADE2	DNA/TcMar-Mariner	(0)	80	2	4125941
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
15	22.3	4.4	4.2	chr9	105244915	105244982	(33149735)	+	(CCCG)n	Simple_repeat	1	71	(0)	4137224
19220	15.8	2.8	1.0	chr9	108324309	108328348	(30066369)	+	L1MA1	LINE/L1	19	4134	(3431)	4142561
1063	31.2	5.5	4.1	chr9	110644153	110644637	(27750080)	+	LTR79	LTR/ERVL	22	513	(14)	4146594
2804	28.5	8.1	5.0	chr9	111291374	111292817	(27101900)	+	L1MEd	LINE/L1	95	1607	(5479)	4147624
3626	26.2	6.8	3.4	chr9	112478828	112479254	(25915463)	+	L1M3b	LINE/L1	2188	2608	(4241)	4149936
1835	17.2	13.1	1.2	chr9	120377443	120377853	(18016864)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	4164920
208	29.4	12.3	8.3	chr9	121909607	121909908	(16484809)	C	L2a	LINE/L2	(23)	3403	3037	4167920
419	29.2	2.4	1.2	chr9	121910003	121910165	(16484552)	C	MIRc	SINE/MIR	(60)	208	44	4167922
272	28.6	20.3	3.4	chr9	125730297	125730709	(12664008)	C	L2c	LINE/L2	(0)	3375	2910	4175235
1607	11.9	6.5	5.8	chr9	126189576	126189835	(12204882)	+	AluSz	SINE/Alu	1	262	(50)	4176016
1778	16.1	3.1	1.4	chr9	129090837	129091122	(9303595)	+	AluJr	SINE/Alu	1	291	(21)	4182071
364	32.5	11.0	1.2	chr9	129091133	129091254	(9303463)	+	L1MEg	LINE/L1	589	715	(5369)	4182072
1793	9.6	12.0	1.1	chr9	129091255	129091514	(9303203)	C	AluSz	SINE/Alu	(20)	292	1	4182073
364	32.5	11.0	1.2	chr9	129091515	129091539	(9303178)	+	L1MEg	LINE/L1	716	748	(5336)	4182072
1359	28.2	7.8	10.9	chr9	129939641	129939918	(8454799)	+	L1MEd	LINE/L1	527	817	(6269)	4183940
1879	16.8	0.0	2.0	chr9	129939919	129940222	(8454495)	+	AluJr4	SINE/Alu	1	298	(14)	4183941
1457	23.4	9.2	5.4	chr9	130646298	130646401	(7748316)	C	L1MCa	LINE/L1	(2375)	3946	3868	4185494
1909	14.0	14.9	4.7	chr9	130646421	130646639	(7748078)	C	MSTA	LTR/ERVL-MaLR	(0)	428	199	4185496
2491	8.1	0.0	0.0	chr9	130646640	130646947	(7747770)	C	AluSp	SINE/Alu	(5)	308	1	4185497
425	32.0	8.7	3.4	chr9	131203641	131203847	(7190870)	+	L1MEd	LINE/L1	159	377	(5865)	4186599
444	27.8	4.2	2.7	chr9	131204224	131204408	(7190309)	+	L1MEd	LINE/L1	858	1045	(6058)	4186599
2034	30.6	8.2	7.7	chr9	133501748	133503118	(4891599)	+	L1MEd	LINE/L1	281	1623	(5480)	4190690
3293	11.7	2.9	6.0	chr9	135644567	135645131	(2749586)	+	LTR10B1	LTR/ERV1	1	547	(0)	4193487
1469	30.0	6.0	3.2	chr9	135645132	135645284	(2749433)	C	L1ME4b	LINE/L1	(693)	199	43	4193485
1043	18.8	19.8	1.0	chr9	135645318	135645623	(2749094)	+	Tigger9b	DNA/TcMar-Tigger	247	624	(0)	4193488
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
277	19.4	2.7	0.0	chr9	137375815	137375886	(1018831)	+	L1MEd	LINE/L1	666	739	(6347)	4195553
1897	17.0	13.5	5.3	chr9	137375951	137376062	(1018655)	+	LTR36	LTR/ERV1	1	122	(489)	4195554
2642	5.8	0.0	0.0	chr9	137376063	137376372	(1018345)	+	AluY	SINE/Alu	1	310	(1)	4195555
12283	19.0	3.4	1.9	chr9	138084979	138086360	(308357)	+	L1MA5	LINE/L1	2410	3784	(3778)	4196515
909	30.4	8.6	2.9	chrX	9079439	9080238	(146960657)	+	L1MEd	LINE/L1	596	1445	(5641)	4374161
19726	10.8	2.6	1.8	chrX	11043632	11047734	(144993161)	C	L1MA3	LINE/L1	(0)	7724	3617	4377396
265	22.8	0.0	1.7	chrX	17096127	17096184	(138944711)	C	MERX	DNA/TcMar-Tigger	(387)	369	313	4387307
266	29.2	8.0	2.0	chrX	17096333	17096377	(138944518)	+	L1MEd	LINE/L1	818	867	(6236)	4387308
2929	0.7	0.0	0.3	chrX	17096378	17096687	(138944208)	+	AluYa5	SINE/Alu	1	309	(2)	4387309
770	26.2	6.0	1.2	chrX	18818999	18819253	(137221642)	+	L1MEd	LINE/L1	577	844	(6259)	4390211
1106	21.2	18.3	2.5	chrX	18819279	18819400	(137221495)	+	L1MEd	LINE/L1	923	1092	(6011)	4390211
2231	10.4	0.0	3.6	chrX	18819401	18819709	(137221186)	+	AluSq2	SINE/Alu	1	298	(15)	4390212
19304	14.4	3.8	2.1	chrX	21023490	21028117	(135012778)	C	L1M1	LINE/L1	(2848)	4717	15	4393979
236	28.2	8.3	1.8	chrX	22081714	22081825	(133959070)	C	MamGypLTR1d	LTR/Gypsy	(693)	120	1	4395461
18358	15.6	5.4	2.4	chrX	27418456	27421542	(128619353)	+	L1M1	LINE/L1	12	3216	(4349)	4403783
250	37.7	0.8	3.9	chrX	38969398	38969524	(117071371)	C	L2b	LINE/L2	(3)	3372	3250	4419802
15	20.9	4.5	0.0	chrX	38969680	38969723	(117071172)	+	(TTA)n	Simple_repeat	1	46	(0)	4419803
845	31.6	7.5	6.5	chrX	38969728	38970552	(117070343)	C	L1MEd	LINE/L1	(6227)	859	27	4419804
2126	30.1	10.1	4.3	chrX	39283391	39284620	(116756275)	C	L1MEd	LINE/L1	(5554)	1532	224	4420270
21511	15.5	1.9	1.6	chrX	43265802	43268319	(112772576)	C	L1MA2	LINE/L1	(5025)	2540	20	4427096
3052	21.4	2.5	3.7	chrX	43399729	43400664	(112640231)	+	L1M1	LINE/L1	12	1269	(6296)	4427260
185	21.1	1.9	5.5	chrX	43400705	43400759	(112640136)	+	L2a	LINE/L2	3366	3418	(8)	4427261
12	15.4	5.3	2.5	chrX	50872657	50872694	(105168201)	+	(ACTCCTC)n	Simple_repeat	1	40	(0)	4439983
25584	4.1	0.1	0.1	chrX	51512322	51518344	(104522551)	C	L1PA3	LINE/L1	(6)	6149	124	4440737
2221	11.1	2.7	0.0	chrX	52419251	52419539	(103621356)	+	AluSx3	SINE/Alu	1	297	(14)	4441858
3144	14.4	1.6	3.2	chrX	53340369	53340716	(102700179)	+	MER89	LTR/ERV1	221	559	(0)	4443519
1147	32.5	3.3	1.4	chrX	53340717	53340913	(102699982)	C	L2	LINE/L2	(1154)	2265	2066	4443518
4652	23.5	8.4	7.8	chrX	54942393	54943469	(101097426)	+	L1MEd	LINE/L1	465	1645	(5458)	4446545
365	27.2	14.4	3.9	chrX	73943786	73943965	(82096930)	+	MIRc	SINE/MIR	25	226	(42)	4464969
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
1913	15.3	0.7	2.0	chrX	77646641	77646941	(78393954)	+	AluJr	SINE/Alu	2	298	(14)	4468596
3626	20.9	3.9	3.7	chrX	77646942	77647437	(78393458)	+	L1M4c	LINE/L1	3238	3761	(2980)	4468590
436	21.5	11.7	2.5	chrX	77647428	77647589	(78393306)	+	L1ME2z	LINE/L1	6266	6444	(0)	4468597
2400	27.7	5.8	7.7	chrX	80223406	80224773	(75816122)	C	L1M1	LINE/L1	(5517)	2048	16	4471592
7848	11.4	0.8	0.6	chrX	85952977	85954611	(70086284)	+	L1MA2	LINE/L1	4188	5831	(473)	4477524
4339	15.9	2.5	0.5	chrX	90617466	90618314	(65422581)	C	LTR12E	LTR/ERV1	(521)	801	1	4482682
2276	11.0	0.0	0.0	chrX	96510890	96511181	(59529714)	C	AluSz	SINE/Alu	(19)	293	2	4489239
10471	7.9	5.4	3.3	chrX	96511274	96512816	(59528079)	C	LTR12C	LTR/ERV1	(0)	1579	3	4489240
2699	18.9	1.0	2.8	chrX	96662800	96663291	(59377604)	C	MER6	DNA/TcMar-Tigger	(342)	523	40	4489462
2294	8.7	1.4	0.0	chrX	96663292	96663577	(59377318)	+	AluSg	SINE/Alu	1	290	(20)	4489467
12298	15.6	2.9	1.6	chrX	100765397	100767432	(55273463)	C	L1M1	LINE/L1	(4490)	2075	13	4494790
2504	6.5	0.0	0.0	chrX	101387871	101388163	(54652732)	C	AluY	SINE/Alu	(16)	295	3	4495955
1221	32.4	4.9	2.3	chrX	101388362	101388961	(54651934)	+	L3	LINE/CR1	3047	3662	(437)	4495956
21027	15.8	2.6	0.8	chrX	101774434	101776150	(54264745)	C	L1MA1	LINE/L1	(5799)	1766	15	4496464
24564	6.4	0.8	0.3	chrX	102191059	102197200	(53843695)	C	L1PA3	LINE/L1	(0)	6155	4	4496957
282	28.1	4.3	2.2	chrX	103249050	103249187	(52791708)	C	L1ME4a	LINE/L1	(4)	6120	5980	4498349
21	13.9	0.0	0.0	chrX	103687084	103687116	(52353779)	+	(T)n	Simple_repeat	1	33	(0)	4498992
5515	13.4	4.2	2.7	chrX	106172030	106173027	(49867868)	C	Tigger3b	DNA/TcMar-Tigger	(217)	1014	2	4502456
946	19.6	0.0	0.0	chrX	107676300	107676472	(48364423)	C	MER5B	DNA/hAT-Charlie	(3)	175	3	4504624
14	18.9	0.0	2.6	chrX	107676473	107676510	(48364385)	+	(CCCCTTT)n	Simple_repeat	1	38	(0)	4504625
12	30.9	0.0	2.0	chrX	107677040	107677089	(48363806)	+	GA-rich	Low_complexity	1	50	(0)	4504626
265	28.4	7.8	4.0	chrX	107893874	107893972	(48146923)	C	L2c	LINE/L2	(1)	3386	3284	4505004
421	26.1	12.5	11.8	chrX	107894001	107894258	(48146637)	+	L2c	LINE/L2	3117	3361	(14)	4505005
1773	13.4	5.9	2.1	chrX	108930592	108930918	(47109977)	C	L1MA2	LINE/L1	(63)	6241	5902	4506351
1347	14.8	0.0	0.0	chrX	108930919	108931120	(47109775)	+	THE1D-int	LTR/ERVL-MaLR	552	753	(827)	4506352
14027	19.2	1.5	3.3	chrX	108945037	108947743	(47093152)	C	L1M1	LINE/L1	(4895)	2670	13	4506359
9929	19.8	2.7	2.1	chrX	113239195	113241094	(42799801)	C	L1MA2	LINE/L1	(5595)	1970	60	4512559
6182	14.0	2.8	0.7	chrX	114160567	114161997	(41878898)	C	L1MA4A	LINE/L1	(0)	7005	5547	4513764
5359	17.7	3.0	1.1	chrX	114161996	114162936	(41877959)	C	L1MA4A	LINE/L1	(5889)	960	1	4513764
647	28.4	2.5	1.0	chrX	114162941	114163139	(41877756)	C	LTR33B	LTR/ERVL	(28)	475	274	4513763
7824	22.3	3.6	1.3	chrX	117482976	117484594	(38556301)	+	L1M1	LINE/L1	17	1673	(5892)	4517780
642	30.0	9.2	8.0	chrX	119389858	119390321	(36650574)	+	L2	LINE/L2	378	847	(2572)	4520957
2228	10.9	1.0	0.0	chrX	119784626	119784919	(36255976)	C	AluSx	SINE/Alu	(15)	297	1	4521827
1688	23.9	2.4	0.0	chrX	126816804	126817171	(29223724)	+	MSTD	LTR/ERVL-MaLR	20	396	(0)	4531612
18397	16.1	2.7	0.8	chrX	126855395	126861382	(29179513)	+	L1MA1	LINE/L1	726	7184	(537)	4531643
573	19.4	3.6	0.7	chrX	127866393	127866527	(28174368)	C	L1P4	LINE/L1	(3359)	2784	2646	4532737
644	18.1	0.8	0.0	chrX	127866533	127866648	(28174247)	+	L1PA14	LINE/L1	426	542	(6147)	4532738
4104	18.1	2.4	3.8	chrX	127866652	127867531	(28173364)	+	MER11C	LTR/ERVK	204	1071	(0)	4532739
231	31.4	6.2	0.7	chrX	133051328	133051465	(22989430)	+	MLT1L	LTR/ERVL-MaLR	348	493	(117)	4540274
308	29.1	2.7	7.7	chrX	133051570	133051763	(22989132)	+	MLT1J	LTR/ERVL-MaLR	290	473	(39)	4540275
1093	20.2	18.2	4.9	chrX	133693766	133694156	(22346739)	+	MSTB2	LTR/ERVL-MaLR	3	457	(0)	4541429
21859	12.1	3.7	1.3	chrX	134298593	134304264	(21736631)	+	L1MA1	LINE/L1	17	5884	(1681)	4542406
15	22.2	2.0	2.0	chrX	137574557	137574605	(18466290)	+	(CCCGCG)n	Simple_repeat	1	50	(0)	4547988
21269	13.3	3.0	0.8	chrX	138410702	138415784	(17625111)	+	L1MA3	LINE/L1	13	5213	(2352)	4549269
40	12.6	1.4	1.4	chrX	139950166	139950238	(16090657)	+	(TCCT)n	Simple_repeat	1	74	(0)	4551450
430	24.4	17.0	11.6	chrX	140028195	140028426	(16012469)	+	L2c	LINE/L2	3098	3344	(31)	4551577
2300	11.3	0.0	0.7	chrX	140028767	140029076	(16011819)	C	AluSz	SINE/Alu	(0)	312	5	4551578
2933	21.1	4.1	5.7	chrX	145015499	145016143	(11024752)	+	L1MA4	LINE/L1	2	635	(4693)	4558568
19813	16.7	2.7	2.6	chrX	147866233	147868923	(8171972)	+	L1MA2	LINE/L1	22	2727	(4838)	4562536
14719	15.9	2.2	1.9	chrX	148019029	148021507	(8019388)	C	L1M1	LINE/L1	(5061)	2504	17	4562717
6265	16.0	1.6	1.6	chrX	151446717	151448744	(4592151)	+	L1PB4	LINE/L1	4133	6156	(0)	4567651
958	31.0	6.0	4.0	chrX	153618752	153619138	(2421757)	C	L1ME3E	LINE/L1	(6110)	993	583	4570480
1790	14.7	1.8	3.1	chrX	153619139	153619450	(2421445)	C	AluJo	SINE/Alu	(0)	312	1	4570490
440	20.5	15.0	3.4	chrX	153653135	153653251	(2387644)	C	FLAM_C	SINE/Alu	(10)	133	1	4570541
1115	28.3	6.9	3.2	chrX	153653267	153653883	(2387012)	+	L1MEd	LINE/L1	577	1267	(4975)	4570542
1400	17.4	3.9	2.5	chrX	153659190	153659548	(2381347)	+	L1MB7	LINE/L1	1433	1796	(783)	4570549
959	21.1	0.0	1.8	chrX	153659552	153659722	(2381173)	C	AluJb	SINE/Alu	(22)	290	123	4570557
2016	17.5	2.2	4.0	chrX	153659723	153659760	(2381135)	+	L1MB7	LINE/L1	1884	1905	(751)	4570549
1755	28.8	8.5	5.6	chrX	153731180	153732321	(2308574)	C	L1MEd	LINE/L1	(5517)	1569	387	4570661
10129	13.2	2.7	1.2	chrX	154945176	154946943	(1093952)	+	L1M2	LINE/L1	3559	5360	(783)	4572638
3404	24.3	3.2	2.2	chrX	155630006	155630941	(409954)	C	L1M1	LINE/L1	(4199)	3366	2423	4573557
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056