1989	11.6	0.3	3.3	chr1	2280087	2280388	(246676034)	+	AluSg4	SINE/Alu	1	293	(17)	3089
1079	26.4	12.2	0.5	chr1	3054708	3055091	(245901331)	+	L1MB4	LINE/L1	5746	6180	(0)	3703
1960	15.8	0.0	1.3	chr1	6052140	6052442	(242903980)	+	AluJb	SINE/Alu	1	299	(13)	7616
851	10.5	7.9	0.0	chr1	6052769	6052920	(242903502)	C	MER53	DNA/hAT	(28)	165	1	7617
5256	21.4	1.9	1.1	chr1	7399484	7400790	(241555632)	C	L1MA6	LINE/L1	(4175)	3391	2097	9803
6663	18.6	17.2	4.8	chr1	7877887	7878594	(241077828)	+	L1MA4A	LINE/L1	2548	3249	(3960)	10461
762	15.1	0.0	0.8	chr1	24847790	24847908	(224108514)	C	AluJr	SINE/Alu	(194)	118	1	45851
18	6.3	6.1	0.0	chr1	26111180	26111212	(222845210)	+	(GCC)n	Simple_repeat	1	35	(0)	48598
334	27.0	7.4	0.9	chr1	27644108	27644219	(221312203)	+	MIR3	SINE/MIR	44	161	(47)	52204
482	26.0	9.3	1.2	chr1	31416042	31416251	(217540171)	+	MIR	SINE/MIR	28	252	(16)	60638
226	33.0	4.1	1.1	chr1	31416272	31416366	(217540056)	C	MIRb	SINE/MIR	(166)	102	5	60636
431	20.1	1.3	2.1	chr1	31416373	31416478	(217539944)	C	MIR3	SINE/MIR	(122)	146	41	60639
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
2196	10.7	0.3	1.6	chr1	32815068	32815375	(216141047)	+	AluSq2	SINE/Alu	1	304	(9)	63799
2111	17.0	4.3	0.2	chr1	32815508	32815827	(216140595)	+	L1MB7	LINE/L1	5728	6064	(120)	63800
1856	19.6	1.4	0.0	chr1	35222940	35223292	(213733130)	C	Arthur1C	DNA/hAT-Tip100	(2)	361	4	68294
785	13.5	8.9	10.0	chr1	35223327	35223496	(213732926)	C	AluJb	SINE/Alu	(8)	304	137	68295
212	18.0	5.7	0.0	chr1	36149927	36149976	(212806446)	C	L2a	LINE/L2	(5)	3421	3369	70236
182	33.3	0.0	0.0	chr1	36385410	36385460	(212570962)	+	MIRb	SINE/MIR	55	105	(163)	70746
642	29.3	14.6	3.5	chr1	40339850	40340418	(208616004)	+	L2b	LINE/L2	2122	2764	(655)	78625
34	0.0	0.0	0.0	chr1	40374597	40374625	(208581797)	+	(GT)n	Simple_repeat	1	29	(0)	78696
16	9.4	10.6	1.9	chr1	40374626	40374672	(208581750)	+	GA-rich	Low_complexity	1	52	(0)	78697
1125	22.7	4.7	1.9	chr1	40612126	40612240	(208344182)	C	MER2	DNA/TcMar-Tigger	(220)	125	2	79172
277	20.0	3.4	2.3	chr1	40612244	40612330	(208344092)	C	L1ME2	LINE/L1	(609)	5835	5748	79171
1151	27.0	5.1	5.7	chr1	40612331	40612802	(208343620)	+	LTR41B	LTR/ERVL	1	469	(289)	79174
17	5.0	0.0	0.0	chr1	41240742	41240762	(207715660)	+	(T)n	Simple_repeat	1	21	(0)	80408
232	27.7	21.7	1.4	chr1	41240912	41241050	(207715372)	+	L3	LINE/CR1	3638	3812	(287)	80409
235	34.6	3.1	7.5	chr1	41241080	41241279	(207715143)	+	L3	LINE/CR1	3905	4095	(4)	80409
24174	9.8	2.7	1.2	chr1	41964112	41966472	(206989950)	+	L1PA10	LINE/L1	3	2415	(3938)	81740
11392	19.4	4.2	4.4	chr1	42712990	42714269	(206242153)	C	L1MA4A	LINE/L1	(3535)	4024	2789	83010
464	32.7	8.0	8.3	chr1	42727197	42727700	(206228722)	+	L1MEg	LINE/L1	35	536	(5548)	83046
292	27.4	0.0	0.0	chr1	44708407	44708468	(204247954)	C	L2a	LINE/L2	(5)	3421	3360	86533
182	34.4	8.4	5.1	chr1	44708492	44708629	(204247793)	C	L2	LINE/L2	(2800)	619	477	86534
351	27.3	16.4	3.1	chr1	44708743	44708969	(204247453)	+	L2	LINE/L2	1546	1808	(1611)	86535
235	11.6	4.4	0.0	chr1	44708980	44709022	(204247400)	+	L1MC5a	LINE/L1	2329	2373	(404)	86536
291	27.2	17.3	1.6	chr1	44709062	44709304	(204247118)	+	L2	LINE/L2	2006	2294	(1125)	86535
2103	12.6	1.7	0.0	chr1	45311406	45311699	(203644723)	+	AluSx	SINE/Alu	1	299	(13)	87719
13361	10.7	5.6	3.7	chr1	45311700	45312079	(203644343)	+	MER4-int	LTR/ERV1	5525	5896	(702)	87712
7424	11.8	1.8	2.8	chr1	50619057	50619909	(198336513)	C	L1PA16	LINE/L1	(3818)	2665	1825	97135
17941	14.3	1.8	2.3	chr1	50766699	50769768	(198186654)	+	L1PA15	LINE/L1	1515	4584	(2182)	97413
2255	25.5	7.0	0.8	chr1	51153673	51155113	(197801309)	+	L1MA9	LINE/L1	1277	2766	(4241)	98049
2113	12.1	1.9	3.2	chr1	51155114	51155428	(197800994)	+	AluSx	SINE/Alu	1	311	(1)	98051
362	30.5	18.1	0.0	chr1	56457055	56457221	(192499201)	+	MIRb	SINE/MIR	5	208	(60)	108870
17498	15.9	3.8	1.0	chr1	57682374	57684946	(191271476)	+	L1PA16	LINE/L1	7	2672	(3811)	111324
14850	18.0	3.8	2.2	chr1	59790936	59796757	(189159665)	+	L1MA5	LINE/L1	1796	7711	(8)	115465
10588	17.1	4.4	9.7	chr1	60186060	60187494	(188768928)	+	L1MC1	LINE/L1	375	1830	(4678)	116145
2397	3.1	0.3	0.0	chr1	60187495	60187782	(188768640)	C	L1PA4	LINE/L1	(0)	6155	5867	116147
415	30.9	12.0	6.1	chr1	61292735	61293195	(187663227)	C	LTR85a	LTR/Gypsy?	(5)	697	206	117916
208	34.3	11.8	0.9	chr1	61293349	61293454	(187662968)	C	L2c	LINE/L2	(299)	3088	2970	117915
2512	5.2	0.0	0.0	chr1	62211684	62211972	(186744450)	+	AluY	SINE/Alu	1	289	(22)	119749
701	14.8	3.4	0.9	chr1	62212136	62212250	(186744172)	+	AluJb	SINE/Alu	16	133	(179)	119750
2567	23.1	8.8	3.0	chr1	63289099	63290203	(185666219)	+	L1M1	LINE/L1	2640	3801	(3761)	121765
1171	24.0	17.4	1.0	chr1	63433679	63434095	(185522327)	C	L2a	LINE/L2	(0)	3426	2927	122066
1492	21.5	0.6	11.3	chr1	65582139	65582537	(183373885)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	205	125998
871	28.6	9.9	2.4	chr1	65582538	65582910	(183373512)	+	L2	LINE/L2	1478	1881	(1538)	125997
586	30.2	7.6	8.1	chr1	65849515	65849935	(183106487)	C	LTR41	LTR/ERVL	(349)	419	1	126371
14449	16.6	3.1	4.6	chr1	68609254	68612736	(180343686)	C	L1M2	LINE/L1	(1112)	6450	3041	130890
35	0.0	0.0	0.0	chr1	72282595	72282627	(176673795)	+	(T)n	Simple_repeat	1	33	(0)	136018
18	14.1	8.3	0.0	chr1	72282717	72282764	(176673658)	+	(CCTCC)n	Simple_repeat	1	52	(0)	136019
16	18.8	2.8	8.2	chr1	72282765	72282787	(176673635)	+	(CCT)n	Simple_repeat	1	73	(0)	136020
28	17.9	3.7	3.6	chr1	72282853	72282933	(176673489)	+	(GGC)n	Simple_repeat	1	84	(0)	136021
32	7.4	0.0	0.0	chr1	72282939	72282981	(176673441)	+	(CAG)n	Simple_repeat	1	43	(0)	136022
28	25.9	0.0	0.0	chr1	72283089	72283162	(176673260)	+	A-rich	Low_complexity	1	74	(0)	136023
17077	16.3	2.4	1.9	chr1	73241220	73246196	(175710226)	+	L1PA16	LINE/L1	1478	6494	(9)	137149
8666	22.0	3.3	3.7	chr1	76742107	76746307	(172210115)	C	L1MB1	LINE/L1	(2120)	5439	1596	141861
42	0.0	0.0	2.3	chr1	77219712	77219754	(171736668)	+	(TTAT)n	Simple_repeat	1	43	(0)	142523
12	22.1	0.0	0.0	chr1	77281649	77281680	(171674742)	+	(GTGTGT)n	Simple_repeat	1	32	(0)	142614
12	20.6	1.7	8.3	chr1	77281880	77281938	(171674484)	+	(GCGCG)n	Simple_repeat	1	60	(0)	142615
38	0.0	0.0	0.0	chr1	78132666	78132698	(170823724)	+	(TG)n	Simple_repeat	1	33	(0)	144156
14335	15.6	5.2	11.1	chr1	80259758	80262699	(168693723)	+	L1PA16	LINE/L1	2	2726	(4127)	146950
52	2.1	0.0	0.0	chr1	80262700	80262748	(168693674)	+	(CA)n	Simple_repeat	1	49	(0)	146951
14335	14.0	1.8	2.5	chr1	80262749	80264101	(168692321)	+	L1PA16	LINE/L1	2727	4090	(2759)	146950
6493	23.6	7.5	2.0	chr1	80548236	80550318	(168406104)	+	L1MB7	LINE/L1	29	2288	(5229)	147343
6530	21.8	1.4	3.4	chr1	80613733	80616215	(168340207)	C	L1PA15-16	LINE/L1	(2543)	4306	1878	147424
5435	19.5	2.9	1.7	chr1	81397675	81398943	(167557479)	C	L1MA5	LINE/L1	(3355)	4783	3510	148394
12426	18.1	4.9	1.4	chr1	84331736	84336296	(164620126)	C	L1PA15	LINE/L1	(7)	6778	2025	152368
2591	7.1	0.0	2.3	chr1	84949357	84949664	(164006758)	+	AluY	SINE/Alu	1	301	(10)	153361
4623	21.8	10.3	3.5	chr1	84949665	84950171	(164006251)	+	L1M2	LINE/L1	2735	3395	(4171)	153359
2119	9.4	5.1	0.0	chr1	86903602	86903878	(162052544)	C	AluSc	SINE/Alu	(16)	293	2	156320
344	31.9	11.6	1.8	chr1	89112997	89113213	(159843209)	+	MIRb	SINE/MIR	28	268	(0)	159511
12	14.4	6.2	0.0	chr1	90721146	90721177	(158235245)	+	GA-rich	Low_complexity	1	34	(0)	161682
490	25.4	15.5	0.0	chr1	90792980	90793153	(158163269)	+	MIRb	SINE/MIR	12	216	(52)	161793
454	34.0	7.1	4.9	chr1	90993970	90994315	(157962107)	+	MLT1K	LTR/ERVL-MaLR	127	480	(115)	162072
3645	26.9	6.8	3.4	chr1	92652716	92655559	(156300863)	+	L1PB4	LINE/L1	284	2768	(4085)	164829
6876	19.4	4.0	6.0	chr1	92655557	92655828	(156300594)	+	L1PB4	LINE/L1	2906	3179	(3670)	164829
9980	21.0	3.0	5.6	chr1	96859364	96863817	(152092605)	C	L1MA4A	LINE/L1	(2934)	4628	358	171261
1162	32.9	7.7	3.2	chr1	104169960	104170861	(144785561)	C	L2a	LINE/L2	(0)	3426	2482	181388
2478	22.2	4.8	2.9	chr1	108140141	108141356	(140815066)	+	L1MB2	LINE/L1	1812	3057	(3581)	186423
2088	8.1	6.2	0.0	chr1	108879553	108879823	(140076599)	+	AluSg	SINE/Alu	1	289	(21)	187487
230	33.0	6.9	4.0	chr1	108879893	108880092	(140076330)	+	L2b	LINE/L2	2960	3162	(225)	187488
1308	28.0	14.9	4.3	chr1	111618846	111619510	(137336912)	+	L2a	LINE/L2	2646	3426	(0)	191796
884	23.5	7.9	2.6	chr1	115441215	115441441	(133514981)	C	MIR	SINE/MIR	(0)	262	23	198180
250	29.7	4.7	1.0	chr1	115441545	115441646	(133514776)	+	MLT1K	LTR/ERVL-MaLR	148	253	(342)	198181
17790	17.9	3.4	2.8	chr1	116086200	116093539	(132862883)	C	L1PB3	LINE/L1	(369)	6554	85	199144
250	26.9	18.2	0.0	chr1	116408123	116408230	(132548192)	+	L2c	LINE/L2	3256	3387	(0)	199634
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1290	7.3	0.0	0.6	chr1	144551779	144551943	(104404479)	C	U1	snRNA	(1)	164	1	209607
12	27.2	2.3	0.0	chr1	151993623	151993666	(96962756)	+	(CCCGC)n	Simple_repeat	1	45	(0)	222236
6074	17.7	1.8	2.6	chr1	152488643	152489298	(96467124)	C	L1M2	LINE/L1	(3706)	3856	3221	222851
4282	9.0	0.8	0.0	chr1	152489276	152489878	(96466544)	C	L1P3	LINE/L1	(1254)	4892	4285	222853
321	6.4	8.1	1.1	chr1	154713961	154714648	(94241774)	+	(GT)n	Simple_repeat	1	744	(0)	226654
2233	10.5	1.6	0.0	chr1	154715156	154715461	(94240961)	+	AluSq2	SINE/Alu	1	311	(2)	226655
2378	8.3	1.0	0.0	chr1	154998728	154999029	(93957393)	C	AluSp	SINE/Alu	(7)	306	2	227184
223	21.8	14.7	5.3	chr1	156054379	156054527	(92901895)	+	MIRc	SINE/MIR	99	268	(0)	229384
891	19.1	8.6	1.2	chr1	156520811	156521059	(92435363)	C	MER5C	DNA/hAT-Charlie	(6)	307	39	230279
3105	7.8	0.7	13.0	chr1	159662970	159663486	(89292936)	C	MLT2A2	LTR/ERVL	(0)	453	1	234565
7066	19.2	2.4	1.3	chr1	159663487	159665315	(89291107)	C	L1MA4	LINE/L1	(4469)	3096	1239	234563
2506	8.4	0.0	0.0	chr1	159890748	159891058	(89065364)	C	AluSx1	SINE/Alu	(1)	311	1	234904
333	29.7	3.5	4.3	chr1	160963606	160963721	(87992701)	+	MIRb	SINE/MIR	102	216	(52)	236559
4601	24.2	3.8	3.1	chr1	163631433	163633474	(85322948)	C	L1M2	LINE/L1	(3210)	3649	1600	241037
447	28.9	17.6	0.4	chr1	167634115	167634354	(81322068)	+	L2c	LINE/L2	3098	3387	(0)	247037
35	0.0	0.0	0.0	chr1	167634942	167634971	(81321451)	+	(GT)n	Simple_repeat	1	30	(0)	247038
308	22.4	12.7	14.3	chr1	167936971	167937179	(81019243)	C	L1MDb	LINE/L1	(5653)	756	552	247570
346	25.5	18.5	3.7	chr1	168623497	168623648	(80332774)	+	MIRc	SINE/MIR	6	175	(55)	248661
27558	2.7	0.0	0.0	chr1	169251562	169257591	(79698831)	C	L1PA2	LINE/L1	(2)	6153	124	249701
1471	18.5	1.0	1.3	chr1	169257597	169257902	(79698520)	C	L1PB3	LINE/L1	(4122)	2741	2437	249700
1688	4.9	0.0	3.5	chr1	169550129	169550359	(79406063)	C	L1PA5	LINE/L1	(0)	6154	5932	250097
2917	14.9	7.3	0.4	chr1	169896411	169896908	(79059514)	+	MER54A	LTR/ERVL	367	901	(0)	250601
257	20.8	11.1	0.0	chr1	169897001	169897072	(79059350)	+	MLT1J	LTR/ERVL-MaLR	100	180	(332)	250602
20	0.0	0.0	0.0	chr1	171486108	171486129	(77470293)	+	(T)n	Simple_repeat	1	22	(0)	252820
17833	9.6	1.6	1.1	chr1	173258173	173262595	(75693827)	+	L1PA10	LINE/L1	4	4445	(1886)	255347
17079	17.0	1.3	2.5	chr1	173616741	173619545	(75336877)	+	L1PA11	LINE/L1	13	4388	(3753)	255862
2485	13.4	2.3	5.0	chr1	174231528	174231967	(74724455)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	256932
10018	9.3	3.0	0.0	chr1	174652320	174653725	(74302697)	C	L1PA7	LINE/L1	(5009)	1452	4	257475
53	0.0	0.0	0.0	chr1	175029654	175029698	(73926724)	+	(CA)n	Simple_repeat	1	45	(0)	258117
67	0.0	5.6	0.0	chr1	175030000	175030070	(73926352)	+	(AC)n	Simple_repeat	1	75	(0)	258118
6254	29.2	6.2	4.8	chr1	175805718	175807587	(73148835)	C	MER110-int	LTR/ERV1	(679)	3968	2089	259234
7833	16.6	3.7	2.2	chr1	179405531	179407217	(69549205)	C	L1M2	LINE/L1	(2639)	4923	3188	264795
2312	11.7	0.3	0.0	chr1	179407218	179407524	(69548898)	C	AluSc	SINE/Alu	(1)	308	1	264797
258	25.4	0.0	0.0	chr1	179586108	179586166	(69370256)	C	HAL1ME	LINE/L1	(2285)	180	122	265037
20	0.0	0.0	0.0	chr1	179586177	179586198	(69370224)	+	(A)n	Simple_repeat	1	22	(0)	265038
26	16.7	3.3	0.0	chr1	179586273	179586332	(69370090)	+	(TCGGCGC)n	Simple_repeat	1	62	(0)	265039
1872	14.2	3.0	3.0	chr1	182068634	182068935	(66887487)	+	AluJo	SINE/Alu	1	302	(10)	268793
25	16.8	3.1	3.0	chr1	182068954	182069018	(66887404)	+	GA-rich	Low_complexity	1	67	(0)	268794
441	33.6	17.1	3.0	chr1	182107178	182107840	(66848582)	+	L2c	LINE/L2	2437	3204	(183)	268852
18	9.8	3.0	0.0	chr1	183635467	183635499	(65320923)	+	(GGGCT)n	Simple_repeat	1	34	(0)	271449
1790	13.7	3.8	2.0	chr1	184559653	184559907	(64396515)	C	AluJb	SINE/Alu	(43)	269	10	272841
1097	13.5	0.0	0.0	chr1	184559911	184560051	(64396371)	C	AluJo	SINE/Alu	(171)	141	1	272842
234	16.7	0.0	2.3	chr1	184560052	184560094	(64396328)	+	MSTA	LTR/ERVL-MaLR	387	428	(0)	272838
386	33.8	3.8	8.0	chr1	187659551	187659949	(61296473)	+	L2a	LINE/L2	3018	3426	(0)	277330
30	0.0	0.0	0.0	chr1	188069425	188069452	(60886970)	+	(T)n	Simple_repeat	1	28	(0)	277826
9960	24.4	3.0	6.8	chr1	188069453	188072491	(60883931)	C	L1MA4A	LINE/L1	(3914)	2931	10	277821
20700	10.7	2.1	1.9	chr1	189512661	189519057	(59437365)	+	L1PA10	LINE/L1	2	6479	(4)	279653
6922	17.3	3.3	0.8	chr1	196038707	196040160	(52916262)	C	L1MA5	LINE/L1	(2501)	4344	2853	288147
4285	21.8	5.5	1.1	chr1	196040156	196041278	(52915144)	C	L1MA5	LINE/L1	(4231)	2618	1444	288147
16495	18.2	5.7	1.0	chr1	198213262	198215368	(50741054)	+	L1PB3	LINE/L1	713	2942	(3974)	290933
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
204	27.3	2.5	3.8	chr1	206118112	206118191	(42838231)	C	MIRc	SINE/MIR	(135)	133	55	304604
5537	19.2	1.6	7.4	chr1	210760168	210760566	(38195856)	+	L1PA17	LINE/L1	2427	2781	(4154)	311628
2004	13.7	5.8	7.3	chr1	210760567	210760936	(38195486)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	311630
1518	15.9	1.4	8.4	chr1	211526224	211526334	(37430088)	+	AluJo	SINE/Alu	194	300	(12)	312864
7244	16.8	4.5	4.4	chr1	211867182	211869061	(37087361)	C	L1MC1	LINE/L1	(4122)	2567	354	313514
4308	15.7	2.9	0.9	chr1	212769084	212770265	(36186157)	+	L1MA3	LINE/L1	2780	3984	(3578)	315097
12	25.3	1.6	6.2	chr1	213015515	213015577	(35940845)	+	(GCCC)n	Simple_repeat	1	64	(0)	315577
27	16.8	0.0	1.8	chr1	213984710	213984766	(34971656)	+	(GGTGGT)n	Simple_repeat	1	57	(0)	317034
254	33.0	8.1	6.1	chr1	214058365	214058784	(34897638)	C	L2c	LINE/L2	(0)	3387	2958	317116
12867	15.8	1.4	0.9	chr1	222169641	222173393	(26783029)	+	L1PA16	LINE/L1	1	3659	(3190)	328752
452	28.3	2.3	0.8	chr1	222425709	222425836	(26530586)	C	MIRc	SINE/MIR	(103)	165	36	329103
7472	17.6	1.9	4.8	chr1	222425842	222427278	(26529144)	+	L1PB3	LINE/L1	2486	3885	(2964)	329104
4296	11.1	1.1	0.8	chr1	223209477	223210084	(25746338)	+	LTR71B	LTR/ERV1	1	610	(0)	330397
1581	10.5	0.5	0.0	chr1	224263830	224264039	(24692383)	+	AluSx	SINE/Alu	97	307	(5)	332181
578	22.4	1.3	7.3	chr1	224264149	224264244	(24692178)	+	MLT1H1	LTR/ERVL-MaLR	402	494	(61)	332182
2086	11.8	2.3	1.4	chr1	224264245	224264540	(24691882)	C	AluSx1	SINE/Alu	(13)	299	1	332183
3856	22.9	1.8	2.5	chr1	225347667	225348858	(23607564)	+	L1M4c	LINE/L1	801	1864	(4520)	333829
254	33.5	14.1	4.4	chr1	225549831	225550416	(23406006)	+	L2c	LINE/L2	2668	3349	(38)	334126
309	17.4	2.2	6.7	chr1	227227750	227227869	(21728553)	+	L1M5	LINE/L1	4234	4346	(1800)	337125
383	23.1	12.4	1.5	chr1	227227871	227228006	(21728416)	C	L1MEg	LINE/L1	(3430)	2716	2564	337126
1531	11.2	1.6	3.9	chr1	227228004	227228263	(21728159)	+	L1PA10	LINE/L1	5881	6134	(34)	337127
4597	16.5	3.3	0.7	chr1	227228252	227229691	(21726731)	C	L1MB7	LINE/L1	(250)	5934	4457	337128
11986	16.0	10.0	4.2	chr1	227245591	227246918	(21709504)	+	L1MA2	LINE/L1	741	2204	(5361)	337150
1912	25.9	7.2	1.4	chr1	228385644	228386518	(20569904)	+	L1M2	LINE/L1	1893	2620	(4229)	338627
1337	14.4	4.1	0.0	chr1	228386521	228386798	(20569624)	+	L1M2	LINE/L1	3188	3477	(3365)	338627
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
563	22.5	0.0	1.6	chr1	228647911	228648032	(20308390)	C	5S	rRNA	(1)	120	1	338982
39	20.2	0.0	4.0	chr1	228687910	228688009	(20268413)	+	(CCTT)n	Simple_repeat	1	100	(0)	339049
701	16.4	0.0	1.6	chr1	229232016	229232139	(19724283)	C	MER61D	LTR/ERV1	(266)	235	114	339904
349	18.1	1.1	1.4	chr1	229232132	229232221	(19724201)	C	LTR27B	LTR/ERV1	(554)	82	1	339905
1062	28.8	7.9	2.6	chr1	229232294	229232760	(19723662)	C	MLT1J	LTR/ERVL-MaLR	(8)	504	11	339906
12	20.7	5.1	0.0	chr1	230090522	230090560	(18865862)	+	GA-rich	Low_complexity	1	41	(0)	341399
635	22.2	3.5	0.0	chr1	230459095	230459261	(18497161)	C	L1ME2	LINE/L1	(441)	5723	5551	341912
667	21.5	9.1	1.5	chr1	230459278	230459480	(18496942)	C	L2a	LINE/L2	(6)	3420	3201	341914
17	19.5	0.0	0.0	chr1	230459531	230459561	(18496861)	+	A-rich	Low_complexity	1	31	(0)	341915
207	28.3	7.0	0.0	chr1	230459595	230459647	(18496775)	C	L2	LINE/L2	(1385)	2034	1978	341916
676	25.0	8.1	4.0	chr1	230459742	230459966	(18496456)	+	MIRb	SINE/MIR	34	268	(0)	341917
26	3.1	3.0	0.0	chr1	232690928	232690960	(16265462)	+	(TTCTT)n	Simple_repeat	1	34	(0)	345269
1777	25.9	9.2	2.5	chr1	234009729	234010617	(14945805)	+	L1MA7	LINE/L1	2754	3670	(3895)	347239
332	30.8	5.5	0.0	chr1	234525879	234525982	(14430440)	C	L1ME4a	LINE/L1	(4)	6120	6011	348033
255	34.1	8.9	6.6	chr1	234526019	234526091	(14430331)	+	MIRc	SINE/MIR	65	153	(115)	348034
2158	10.7	1.0	0.0	chr1	234526092	234526382	(14430040)	C	AluSz	SINE/Alu	(18)	294	1	348035
55	0.0	0.0	0.0	chr1	234545000	234545046	(14411376)	+	(GT)n	Simple_repeat	1	47	(0)	348059
2426	8.1	0.0	0.7	chr1	235505383	235505689	(13450733)	C	AluSx1	SINE/Alu	(7)	305	1	349878
262	28.7	1.8	6.9	chr1	235852206	235852321	(13104101)	C	Tigger16b	DNA/TcMar-Tigger	(178)	158	49	350484
2392	13.4	0.0	0.0	chr1	235872014	235872319	(13084103)	+	AluSx	SINE/Alu	1	306	(6)	350523
3132	18.3	6.4	5.6	chr1	235872320	235872649	(13083773)	C	MER39	LTR/ERV1	(122)	585	267	350522
2233	10.3	2.1	0.3	chr1	235872650	235872931	(13083491)	+	AluSz	SINE/Alu	12	298	(14)	350524
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
2638	21.2	6.0	6.0	chr1	236257525	236258604	(12697818)	+	L1M3de	LINE/L1	1174	2138	(4596)	351258
2137	14.1	0.0	0.7	chr1	236258605	236258909	(12697513)	+	AluSz	SINE/Alu	1	303	(9)	351261
884	22.8	2.5	0.0	chr1	238124901	238125093	(10831329)	+	L1MC4	LINE/L1	6812	7009	(1033)	354243
547	31.1	3.3	0.5	chr1	238125121	238125327	(10831095)	C	L1MC4a	LINE/L1	(2288)	5594	5382	354242
1472	24.0	6.2	11.5	chr1	240010232	240010824	(8945598)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	356989
418	33.7	8.6	7.1	chr1	240010849	240011283	(8945139)	+	L2b	LINE/L2	2934	3375	(0)	356990
4916	15.8	5.8	1.4	chr1	241777718	241779348	(7177074)	C	L1MCa	LINE/L1	(3198)	3123	1393	359815
17856	15.6	2.1	2.2	chr1	243580042	243583170	(5373252)	+	L1PA16	LINE/L1	4	3145	(3704)	362779
382	22.9	3.5	0.0	chr1	243946692	243946774	(5009648)	C	Arthur1B	DNA/hAT-Tip100	(1127)	98	13	363356
3576	25.2	5.6	2.3	chr1	244546239	244547950	(4408472)	+	L1M1	LINE/L1	1897	3712	(3850)	364336
6914	13.3	4.3	0.6	chr10	798816	800596	(132996826)	+	L1PA15-16	LINE/L1	2418	4365	(2478)	371852
1082	12.3	0.5	4.6	chr10	1002314	1002509	(132794913)	C	L1M2a	LINE/L1	(3723)	3441	3254	372155
9190	20.2	7.5	2.5	chr10	1002497	1005131	(132792291)	C	L1M2a	LINE/L1	(4178)	2990	193	372155
2029	12.7	0.3	1.3	chr10	1508499	1508805	(132288617)	+	AluSx1	SINE/Alu	2	305	(7)	372658
2819	19.6	5.1	7.9	chr10	3372209	3372608	(130424814)	C	LTR8B	LTR/ERV1	(362)	458	40	375002
16	0.0	0.0	0.0	chr10	3372668	3372684	(130424738)	+	(A)n	Simple_repeat	1	17	(0)	375004
4326	24.8	5.0	1.4	chr10	5087673	5090283	(128707139)	C	L1PA15-16	LINE/L1	(2853)	3996	1263	377289
1759	17.6	3.0	0.0	chr10	5601087	5601376	(128196046)	+	AluJr	SINE/Alu	1	299	(13)	377981
7519	20.9	6.6	4.3	chr10	11350453	11351319	(122446103)	C	MER66-int	LTR/ERV1	(5100)	1576	717	386744
204	28.2	2.7	5.3	chr10	11824931	11825005	(121972417)	C	L2b	LINE/L2	(0)	3375	3303	387593
1917	20.6	4.8	0.2	chr10	12624245	12624677	(121172745)	C	L1MB1	LINE/L1	(2)	6166	5713	389290
2303	11.4	0.0	0.0	chr10	13262786	13263083	(120534339)	C	AluSx	SINE/Alu	(14)	298	1	390408
414	36.3	10.7	1.3	chr10	17199565	17199868	(116597554)	C	L2	LINE/L2	(437)	2982	2647	396957
3798	21.5	7.9	4.8	chr10	21113853	21116171	(112681251)	C	L1ME1	LINE/L1	(2938)	3381	940	402983
2233	11.8	0.3	0.0	chr10	22020347	22020642	(111776780)	+	AluSp	SINE/Alu	1	297	(16)	404693
4495	15.6	3.7	2.5	chr10	22020643	22020692	(111776730)	+	L1MB3	LINE/L1	6314	6355	(1)	404688
550	27.7	5.8	0.5	chr10	22020750	22020945	(111776477)	C	Charlie7	DNA/hAT-Charlie	(2346)	266	60	404694
1102	32.8	14.6	4.6	chr10	22020970	22021138	(111776284)	C	L2	LINE/L2	(1197)	2222	2054	404695
2031	14.3	0.3	0.7	chr10	22021139	22021438	(111775984)	+	AluJo	SINE/Alu	3	301	(11)	404696
231	25.0	12.7	2.0	chr10	23427289	23427386	(110370036)	C	MLT1N2	LTR/ERVL-MaLR	(3)	559	450	406870
9840	20.6	5.8	5.6	chr10	23630314	23632143	(110165279)	+	L1M4	LINE/L1	18	1885	(5632)	407229
1192	24.2	17.7	1.2	chr10	26405229	26405558	(107391864)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	411576
339	34.4	11.0	4.2	chr10	26405560	26405820	(107391602)	C	L1ME3G	LINE/L1	(1276)	4870	4590	411573
1747	14.8	0.4	1.8	chr10	29956833	29957110	(103840312)	C	AluJr	SINE/Alu	(20)	292	19	417792
3729	27.1	3.9	4.8	chr10	31466922	31468036	(102329386)	+	L1PB4	LINE/L1	4	1108	(5827)	420340
10585	18.2	4.1	1.3	chr10	31475230	31479037	(102318385)	+	L1PB4	LINE/L1	2175	6925	(0)	420340
2285	10.8	0.3	1.3	chr10	35688897	35689031	(98108391)	+	AluSx1	SINE/Alu	1	136	(176)	426944
2249	12.3	0.0	0.0	chr10	35689032	35689341	(98108081)	+	AluSq	SINE/Alu	1	310	(3)	426945
1036	14.8	3.9	0.0	chr10	42619070	42619265	(91178157)	+	L1MB4	LINE/L1	7	210	(6397)	432297
2332	24.1	3.6	5.2	chr10	42619266	42619931	(91177491)	+	L1MB4	LINE/L1	1887	2561	(5059)	432297
183	27.4	1.9	0.0	chr10	42757601	42757651	(91039771)	+	L2b	LINE/L2	3293	3344	(31)	432505
12027	20.2	3.4	2.7	chr10	46239732	46244977	(87552445)	+	L1M2	LINE/L1	358	5730	(1832)	437389
16462	17.4	1.9	1.4	chr10	47594269	47598422	(86199000)	+	L1PA17	LINE/L1	1745	5922	(993)	439406
13	0.0	0.0	0.0	chr10	49815572	49815588	(83981834)	+	(AAC)n	Simple_repeat	1	17	(0)	442361
399	17.1	1.2	0.0	chr10	49815630	49815711	(83981711)	C	L1MC1	LINE/L1	(4614)	2019	1937	442356
448	26.9	5.2	2.0	chr10	51027951	51028098	(82769324)	+	Eulor2A	DNA?	47	199	(109)	444249
11315	20.9	3.5	2.1	chr10	52005419	52010471	(81786951)	+	L1PA14	LINE/L1	810	5940	(752)	445706
3051	26.0	5.7	2.4	chr10	55184098	55185164	(78612258)	+	BLACKJACK	DNA/hAT-Blackjack	421	1524	(1445)	449835
15360	17.2	5.7	1.1	chr10	58534382	58539543	(75257879)	+	L1PB4	LINE/L1	1456	6925	(0)	454310
512	31.9	4.6	5.3	chr10	68135708	68135992	(65661430)	C	L2a	LINE/L2	(3)	3423	3141	468586
2231	11.6	0.0	0.0	chr10	68563683	68563976	(65233446)	C	AluSx	SINE/Alu	(13)	299	6	469551
342	31.7	4.0	4.6	chr10	69237763	69237914	(64559508)	+	MIRc	SINE/MIR	4	154	(114)	471168
11472	24.1	6.5	4.3	chr10	74717519	74718915	(59078507)	C	L1MA8	LINE/L1	(3785)	2941	1408	481666
17089	15.0	3.7	1.3	chr10	76500876	76506002	(57291420)	C	L1PA16	LINE/L1	(10)	6493	1239	484573
726	20.8	8.8	8.0	chr10	77717076	77717099	(56080323)	C	MIR	SINE/MIR	(24)	238	220	486470
2533	12.9	3.2	2.6	chr10	77717100	77717528	(56079894)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	486471
16489	17.6	3.1	5.4	chr10	78322204	78329277	(55468145)	C	L1MA4A	LINE/L1	(34)	7688	790	487609
240	37.4	5.5	1.7	chr10	81018987	81019160	(52778262)	C	L2c	LINE/L2	(94)	3293	3113	492045
1087	18.5	3.6	0.0	chr10	81019226	81019436	(52777986)	+	MER20	DNA/hAT-Charlie	1	219	(0)	492046
22	17.2	0.0	0.0	chr10	81019454	81019492	(52777930)	+	A-rich	Low_complexity	1	39	(0)	492047
14	13.6	7.1	2.2	chr10	81019507	81019548	(52777874)	+	(TTA)n	Simple_repeat	1	45	(0)	492048
3406	24.2	5.5	5.2	chr10	82913243	82915344	(50882078)	C	L1MCa	LINE/L1	(4366)	2279	1	494680
3991	26.9	4.1	5.3	chr10	83773898	83775583	(50021839)	+	L1M2	LINE/L1	1138	2707	(4146)	495842
1754	19.9	0.3	1.3	chr10	83775584	83775889	(50021533)	+	AluSx	SINE/Alu	5	307	(5)	495844
22772	15.2	5.7	2.9	chr10	84637241	84639360	(49158062)	+	L1PA8	LINE/L1	639	2836	(3310)	497148
2345	12.2	2.8	11.3	chr10	87581797	87581888	(46215534)	C	MSTC	LTR/ERVL-MaLR	(331)	97	1	501490
188	31.6	1.3	9.5	chr10	87582018	87582101	(46215321)	+	L3	LINE/CR1	452	528	(3571)	501492
185	26.7	6.2	2.2	chr10	96514271	96514362	(37283060)	+	MIR	SINE/MIR	10	105	(157)	516114
18386	14.2	2.2	0.6	chr10	98663410	98669897	(35127525)	+	L1PA16	LINE/L1	1	6634	(0)	520319
17817	14.2	2.7	1.1	chr10	99043520	99047618	(34749804)	+	L1PA16	LINE/L1	3130	7292	(849)	520861
5572	19.5	3.3	5.6	chr10	103531820	103532920	(30264502)	C	L1MA5	LINE/L1	(3624)	3938	2871	529138
16	11.3	5.0	2.4	chr10	103547691	103547738	(30249684)	+	(TGTGAG)n	Simple_repeat	1	49	(0)	529182
536	22.8	2.4	2.9	chr10	109801870	109802085	(23995337)	+	L1ME2	LINE/L1	2938	3161	(2985)	538435
16849	15.0	2.9	0.6	chr10	109802091	109806294	(23991128)	+	L1PA15	LINE/L1	2391	6690	(2)	538437
13315	17.9	4.5	5.8	chr10	111323397	111325418	(22472004)	+	L1PB4	LINE/L1	2514	4658	(2191)	540931
1803	18.5	7.4	9.2	chr10	114074970	114075160	(19722262)	C	L1ME1	LINE/L1	(587)	5592	5384	545345
985	18.2	4.6	2.3	chr10	114075240	114075453	(19721969)	+	MER20	DNA/hAT-Charlie	1	219	(0)	545350
193	18.6	18.9	1.1	chr10	118047180	118047266	(15750156)	+	L2b	LINE/L2	3266	3371	(4)	551478
452	26.9	4.5	1.7	chr10	118047407	118047580	(15749842)	+	MIR3	SINE/MIR	7	185	(23)	551479
204	26.3	7.5	9.2	chr10	119655524	119655632	(14141790)	C	L3	LINE/CR1	(1594)	2505	2399	554328
7520	22.6	2.5	3.9	chr10	121004053	121007693	(12789729)	C	L1PA15-16	LINE/L1	(2110)	4736	1263	556495
2181	12.7	0.0	1.9	chr10	122359237	122359552	(11437870)	+	AluSz	SINE/Alu	1	310	(2)	558747
3028	26.0	11.9	11.4	chr10	122359553	122359667	(11437755)	+	L1MDa	LINE/L1	1935	2052	(4581)	558745
3116	19.6	5.6	4.1	chr10	122359671	122359930	(11437492)	+	L1MD2	LINE/L1	5447	5708	(651)	558748
1595	27.1	6.8	7.8	chr10	123823069	123823956	(9973466)	+	HAL1	LINE/L1	1599	2477	(30)	560951
35	0.0	0.0	0.0	chr10	124792505	124792537	(9004885)	+	(TTTGT)n	Simple_repeat	1	33	(0)	562471
2296	5.1	0.3	2.7	chr10	124792538	124792693	(9004729)	C	AluSp	SINE/Alu	(28)	285	134	562472
460	21.8	6.0	0.0	chr10	126220548	126220657	(7576765)	C	MER53	DNA/hAT	(75)	118	2	564572
4052	18.5	4.2	0.6	chr10	131639916	131641266	(2156156)	+	L1PA15-16	LINE/L1	2304	3691	(3158)	570774
984	28.4	4.6	2.1	chr10	133157282	133157706	(639716)	+	Charlie2b	DNA/hAT-Charlie	2347	2782	(0)	572208
14	14.6	5.0	2.4	chr10	133157877	133157916	(639506)	+	GA-rich	Low_complexity	1	42	(0)	572209
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
1460	21.1	3.2	1.1	chr11	483442	483806	(134602816)	C	L1M4	LINE/L1	(2122)	4024	3652	573446
1351	27.8	8.3	2.5	chr11	483864	484431	(134602191)	C	L1MC3	LINE/L1	(493)	7292	6689	573445
1409	31.0	7.5	3.2	chr11	628048	628757	(134457865)	C	L1MB3	LINE/L1	(114)	6069	5327	573647
1355	18.6	3.1	0.0	chr11	739451	739730	(134346892)	C	L1MB3	LINE/L1	(76)	6107	5819	573857
1994	9.8	0.0	0.8	chr11	739731	739994	(134346628)	C	AluSg	SINE/Alu	(2)	308	47	573865
277	32.1	2.8	0.0	chr11	2289354	2289459	(132797163)	C	L1MEh	LINE/L1	(2079)	156	48	575631
238	29.1	5.5	0.0	chr11	2289495	2289580	(132797042)	C	L2	LINE/L2	(609)	2810	2720	575640
1639	18.4	2.2	1.6	chr11	2289650	2289969	(132796653)	+	L1MB3	LINE/L1	5862	6183	(0)	575641
643	28.2	0.0	0.6	chr11	5495001	5495171	(129591451)	+	L1M1	LINE/L1	1357	1526	(5970)	580071
1530	21.8	6.7	2.1	chr11	5495167	5495923	(129590699)	+	L1M1	LINE/L1	2943	3743	(3816)	580071
13558	21.8	5.1	1.8	chr11	7411155	7413746	(127672876)	C	L1MA4A	LINE/L1	(3998)	3118	22	582629
11	20.5	5.1	0.0	chr11	9461144	9461182	(125625440)	+	(CGGCTC)n	Simple_repeat	1	41	(0)	585847
640	27.6	6.0	2.7	chr11	9528619	9528867	(125557755)	C	MIRc	SINE/MIR	(18)	250	2	586015
16	0.0	0.0	0.0	chr11	9528986	9529002	(125557620)	+	(A)n	Simple_repeat	1	17	(0)	586016
2372	10.8	0.0	0.0	chr11	10079966	10080270	(125006352)	+	AluSq	SINE/Alu	1	305	(8)	587015
13596	20.8	3.5	2.2	chr11	10080271	10081476	(125005146)	+	L1M2	LINE/L1	2475	3744	(3105)	587014
6666	16.2	4.2	1.5	chr11	15399302	15402030	(119684592)	C	L1PA3	LINE/L1	(0)	6858	1968	595448
20956	11.9	2.3	1.3	chr11	16628650	16633177	(118453445)	C	L1PA16	LINE/L1	(1526)	5323	734	597253
3488	22.8	2.6	0.6	chr11	16889625	16890574	(118196048)	+	L1PA15-16	LINE/L1	2154	3113	(3736)	597640
291	26.2	8.5	9.5	chr11	20019537	20019894	(115066728)	C	L2-3_Crp	LINE/L2	(970)	1126	773	603230
2189	12.8	0.7	0.0	chr11	33045073	33045370	(102041252)	+	AluJb	SINE/Alu	1	300	(12)	622705
1064	15.5	2.3	1.7	chr11	33045371	33045544	(102041078)	+	AluJb	SINE/Alu	134	308	(4)	622706
1895	21.8	23.7	0.8	chr11	33327090	33327736	(101758886)	+	L1MC4	LINE/L1	7238	8041	(1)	623305
347	25.8	9.3	2.8	chr11	33907165	33907328	(101179294)	C	MIRc	SINE/MIR	(58)	210	39	624264
182	34.6	0.0	0.0	chr11	33907313	33907364	(101179258)	+	LFSINE_Vert	SINE/tRNA	244	295	(164)	624265
698	24.0	6.4	6.5	chr11	33907432	33907677	(101178945)	+	MIR	SINE/MIR	2	241	(21)	624266
14	14.6	0.0	3.1	chr11	34357915	34357946	(100728676)	+	(GGC)n	Simple_repeat	1	32	(0)	625127
13	20.1	0.0	7.5	chr11	34357947	34357967	(100728655)	+	(GGAGGC)n	Simple_repeat	1	53	(0)	625128
25	21.4	0.0	0.0	chr11	36309951	36310005	(98776617)	+	(CCA)n	Simple_repeat	1	55	(0)	628227
1377	23.8	5.8	11.8	chr11	44014117	44014692	(91071930)	C	MLT1F	LTR/ERVL-MaLR	(6)	542	4	639403
406	28.6	15.2	5.7	chr11	44095044	44095444	(90991178)	C	L1ME4b	LINE/L1	(2138)	5744	5554	639565
17636	13.7	3.0	0.9	chr11	44155321	44158345	(90928277)	C	L1MA3	LINE/L1	(4006)	3559	470	639651
449	29.2	5.5	4.7	chr11	58524847	58525101	(76561521)	C	MARNA	DNA/TcMar-Mariner	(75)	511	255	655615
3516	24.3	4.0	4.6	chr11	60635504	60636237	(74450385)	+	L1PB4	LINE/L1	2211	2943	(3910)	658607
301	27.6	7.2	3.7	chr11	61793081	61793242	(73293380)	+	MIRb	SINE/MIR	15	182	(86)	660848
1346	13.7	19.9	0.0	chr11	61936401	61936641	(73149981)	C	AluSz6	SINE/Alu	(11)	301	1	661117
7432	18.1	2.9	10.3	chr11	61936642	61937319	(73149303)	+	L1M4	LINE/L1	1742	2362	(5155)	661114
2330	8.4	0.3	0.3	chr11	62336902	62337198	(72749424)	C	AluSp	SINE/Alu	(16)	297	1	661866
19577	12.1	3.4	1.7	chr11	63320933	63326604	(71760018)	+	L1PA8	LINE/L1	719	6485	(2)	663609
707	30.2	2.1	0.0	chr11	67385610	67385847	(67700775)	+	L2a	LINE/L2	3017	3259	(167)	671548
1818	14.8	3.6	0.4	chr11	67385848	67386117	(67700505)	C	AluJb	SINE/Alu	(33)	279	1	671549
1108	19.8	8.6	1.9	chr11	68024426	68024749	(67061873)	C	L1M2	LINE/L1	(4031)	2818	2471	672639
637	25.8	18.2	0.0	chr11	68024755	68025033	(67061589)	C	L1MD3	LINE/L1	(755)	7127	6776	672638
269	24.8	1.9	6.5	chr11	69232145	69232252	(65854370)	C	MIRc	SINE/MIR	(85)	183	81	674752
1636	20.0	7.3	2.5	chr11	69232325	69232765	(65853857)	+	MLT1C	LTR/ERVL-MaLR	1	464	(3)	674753
2002	21.0	4.4	3.4	chr11	70022707	70023200	(65063422)	+	MLT1D	LTR/ERVL-MaLR	1	499	(6)	676147
227	29.0	6.1	0.0	chr11	70023309	70023370	(65063252)	C	L2b	LINE/L2	(64)	3311	3246	676148
2128	11.2	2.7	0.0	chr11	70220491	70220777	(64865845)	+	AluSx1	SINE/Alu	1	295	(17)	676459
2241	10.7	3.3	13.0	chr11	70220788	70221138	(64865484)	+	L1P4a	LINE/L1	2017	2354	(4149)	676460
1591	16.4	5.5	1.4	chr11	70221139	70221419	(64865203)	+	AluJo	SINE/Alu	2	294	(18)	676461
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
1870	11.4	1.5	0.7	chr11	72081141	72081413	(63005209)	+	AluJb	SINE/Alu	1	275	(37)	679310
2167	12.3	0.3	0.3	chr11	73009214	73009505	(62077117)	+	AluSz	SINE/Alu	1	292	(20)	681016
7394	19.6	5.7	5.0	chr11	73009569	73011968	(62074654)	C	L1M2	LINE/L1	(4261)	2588	2	681017
12581	18.4	2.5	1.4	chr11	76941574	76947179	(58139443)	C	L1M2a1	LINE/L1	(1418)	6144	455	688974
1648	19.1	1.2	0.0	chr11	77249430	77249743	(57836879)	+	L1MCa	LINE/L1	1	318	(6190)	689497
4021	16.8	2.8	11.3	chr11	77249747	77250088	(57836534)	C	L1M2a	LINE/L1	(3067)	4495	4256	689498
2517	6.8	0.0	0.0	chr11	77546623	77546916	(57539706)	+	AluSg	SINE/Alu	5	298	(12)	690133
195	23.5	0.0	0.0	chr11	77547005	77547055	(57539567)	+	L2a	LINE/L2	3375	3425	(1)	690134
18	0.0	0.0	0.0	chr11	77547059	77547081	(57539541)	+	(ATGG)n	Simple_repeat	1	23	(0)	690135
226	9.8	0.0	0.0	chr11	77547167	77547207	(57539415)	C	L1MA3	LINE/L1	(0)	6305	6265	690136
47	25.2	0.0	4.3	chr11	77547209	77547392	(57539230)	+	(TCCC)n	Simple_repeat	1	176	(0)	690137
1416	17.6	10.6	0.0	chr11	77547393	77547636	(57538986)	C	AluJb	SINE/Alu	(39)	273	1	690138
2025	21.7	1.9	0.6	chr11	81012043	81012679	(54073943)	+	L1M2	LINE/L1	2761	3245	(4018)	696763
10415	16.5	3.4	0.7	chr11	87207740	87211125	(47875497)	+	L1P4a	LINE/L1	1279	4739	(2027)	706803
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
17736	14.7	1.8	2.1	chr11	94423045	94428581	(40658041)	+	L1PA16	LINE/L1	2	5519	(964)	717093
1557	28.9	10.0	1.6	chr11	94738558	94739134	(40347488)	C	L2	LINE/L2	(2126)	1293	653	717597
12	25.1	3.2	4.7	chr11	95067557	95067618	(40019004)	+	(GGC)n	Simple_repeat	1	64	(0)	718067
8266	21.3	6.9	3.5	chr11	95618331	95621443	(39465179)	+	L1M2	LINE/L1	997	3189	(3656)	718922
19744	11.7	2.7	0.6	chr11	96519517	96521068	(38565554)	C	L1PA13	LINE/L1	(3106)	3660	2078	720222
12811	17.1	4.9	14.1	chr11	102071314	102072466	(33014156)	C	L1M2	LINE/L1	(3890)	3675	2594	727321
12815	23.4	5.5	4.0	chr11	102358469	102359954	(32726668)	C	L1MA9	LINE/L1	(3494)	4065	2521	727811
14839	17.5	5.8	1.8	chr11	107104872	107109430	(27977192)	+	L1PB3	LINE/L1	1548	6366	(557)	734442
2008	15.8	0.3	0.0	chr11	109262525	109262822	(25823800)	C	AluSx	SINE/Alu	(13)	299	1	738090
1803	29.1	7.1	4.3	chr11	109262823	109263434	(25823188)	C	L1MA10	LINE/L1	(5335)	2182	1555	738084
24431	8.0	1.3	1.1	chr11	112432121	112434594	(22652028)	C	L1PA10	LINE/L1	(2952)	3379	900	743124
301	26.5	0.0	1.4	chr11	113663125	113663193	(21423429)	+	MER115	DNA/hAT-Tip100	1	68	(625)	744947
2245	28.5	2.2	0.0	chr11	113663193	113663684	(21422938)	+	FordPrefect	DNA/hAT-Tip100	100	602	(1081)	744948
422	29.2	3.9	5.0	chr11	115923831	115924010	(19162612)	C	MIRb	SINE/MIR	(14)	254	77	748429
13	22.1	0.0	0.0	chr11	117614517	117614548	(17472074)	+	(CTC)n	Simple_repeat	1	32	(0)	751444
405	33.2	0.4	6.7	chr11	117614563	117614736	(17471886)	C	MIRc	SINE/MIR	(71)	197	32	751445
12	20.0	0.0	0.0	chr11	118205682	118205710	(16880912)	+	(TCT)n	Simple_repeat	1	29	(0)	752499
12	10.6	2.9	5.7	chr11	125626315	125626348	(9460274)	+	(TGGAAT)n	Simple_repeat	1	35	(0)	764863
19033	14.3	3.4	1.5	chr11	129558638	129563350	(5523272)	+	L1P4d	LINE/L1	1573	6419	(516)	770483
1111	19.3	15.3	0.9	chr11	129897722	129898036	(5188586)	C	L1MCa	LINE/L1	(4660)	1848	1519	770961
6727	16.5	6.2	3.4	chr11	129898016	129898335	(5188287)	C	L1MCa	LINE/L1	(5110)	1398	1051	770961
2168	11.9	0.0	1.0	chr11	134057672	134057973	(1028649)	C	AluSx1	SINE/Alu	(13)	299	1	776731
875	27.0	14.4	9.7	chr11	134057974	134058301	(1028321)	C	L1MEd	LINE/L1	(5988)	1098	736	776729
250	33.7	3.3	1.8	chr11	134227657	134227785	(858837)	+	MIRb	SINE/MIR	65	206	(62)	776967
224	33.5	7.6	3.4	chr11	134228038	134228218	(858404)	C	Tigger19b	DNA/TcMar-Tigger	(2)	548	443	776968
1156	24.9	0.8	0.8	chr12	1680863	1681113	(131594196)	+	MIR	SINE/MIR	12	262	(0)	781082
2176	22.5	12.2	4.5	chr12	2050902	2051965	(131223344)	C	L2a	LINE/L2	(0)	3426	2251	781622
14	12.7	0.0	7.5	chr12	2052290	2052329	(131222980)	+	(CTCCC)n	Simple_repeat	1	40	(0)	781623
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
485	34.4	6.5	8.9	chr12	3801567	3802026	(129473283)	+	L2c	LINE/L2	2930	3377	(10)	784438
17	20.9	0.0	2.2	chr12	6323565	6323610	(126951699)	+	(CAGGAA)n	Simple_repeat	1	46	(0)	788477
181	27.3	0.0	3.5	chr12	6323757	6323813	(126951496)	+	L2b	LINE/L2	3307	3361	(14)	788478
2110	7.1	3.3	1.7	chr12	6568946	6569239	(126706070)	+	AluSc	SINE/Alu	2	300	(9)	788955
622	12.9	3.0	12.2	chr12	6569281	6569427	(126705882)	C	AluJr4	SINE/Alu	(179)	133	1	788956
9356	12.0	2.2	0.1	chr12	8827452	8828801	(124446508)	C	L1MA3	LINE/L1	(5270)	2295	918	792954
2566	16.4	1.1	1.4	chr12	8828799	8829244	(124446065)	C	L1MA3	LINE/L1	(7105)	460	16	792954
1963	26.6	6.4	7.5	chr12	10380421	10381221	(122894088)	+	L1M2	LINE/L1	1	776	(6433)	795171
1969	16.6	2.8	2.8	chr12	10381206	10381627	(122893682)	+	L1M2	LINE/L1	2759	3180	(4029)	795171
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
4021	24.4	4.6	4.7	chr12	17464820	17466045	(115809264)	+	L1M4	LINE/L1	24	1247	(6270)	805547
2603	25.3	7.1	4.4	chr12	17922170	17923030	(115352279)	+	L1PB4	LINE/L1	3189	4086	(4056)	806023
3522	12.2	0.0	2.7	chr12	19787682	19788281	(113487028)	C	L1PA16	LINE/L1	(3988)	2865	2282	808747
4188	17.1	1.2	4.0	chr12	21215092	21215942	(112059367)	C	L1PA16	LINE/L1	(1904)	4242	3416	810512
24	20.6	0.0	5.4	chr12	21501481	21501554	(111773755)	+	(TCTCCGA)n	Simple_repeat	1	74	(0)	810844
715	17.6	3.8	3.2	chr12	22725689	22725846	(110549463)	C	MER5A	DNA/hAT-Charlie	(29)	160	2	812576
227	33.3	1.3	0.0	chr12	22725908	22725985	(110549324)	C	MLT1J2	LTR/ERVL-MaLR	(285)	163	85	812577
8527	20.7	2.3	1.4	chr12	23375155	23378011	(109897298)	+	L1PA17	LINE/L1	345	3015	(3904)	813513
16	21.6	0.0	0.0	chr12	25691974	25692005	(107583304)	+	A-rich	Low_complexity	1	32	(0)	816833
1610	16.1	11.8	1.2	chr12	26088380	26088705	(107186604)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	817483
13	6.5	8.8	2.7	chr12	26088800	26088833	(107186476)	+	(TTTTAG)n	Simple_repeat	1	37	(0)	817484
477	30.8	10.1	4.5	chr12	29164031	29164145	(104111164)	+	MIR	SINE/MIR	150	262	(0)	822004
660	24.0	3.9	1.2	chr12	31959044	31959216	(101316093)	+	MER5A	DNA/hAT-Charlie	12	189	(0)	826461
12	20.9	0.0	4.8	chr12	31959362	31959403	(101315906)	+	(CTGGTC)n	Simple_repeat	1	42	(0)	826462
17	16.4	0.0	4.4	chr12	31959530	31959574	(101315735)	+	G-rich	Low_complexity	1	45	(0)	826463
4203	16.2	4.2	2.8	chr12	34225472	34226240	(99049069)	C	L1M2	LINE/L1	(3517)	4045	3253	829945
3801	16.1	3.5	2.4	chr12	38132548	38133328	(95141981)	+	L1M2	LINE/L1	3253	4044	(3518)	830720
3169	14.1	1.1	2.7	chr12	41413115	41413674	(91861635)	+	L1MA5A	LINE/L1	5741	6291	(6)	835013
5470	12.4	0.6	1.1	chr12	41413691	41414548	(91860761)	C	L1PA15-16	LINE/L1	(3874)	2975	2122	835014
21764	8.9	1.9	0.5	chr12	42938557	42944142	(90331167)	C	L1PA10	LINE/L1	(46)	6307	638	837409
20238	15.7	1.0	1.1	chr12	46047926	46051284	(87224025)	+	L1PA16	LINE/L1	1	2914	(3939)	841769
205	36.4	18.9	0.7	chr12	49375303	49375595	(83899714)	C	MamRTE1	LINE/RTE-BovB	(11)	3801	3443	847063
1695	15.6	6.8	0.4	chr12	49375815	49376089	(83899220)	C	AluJb	SINE/Alu	(18)	294	1	847064
523	21.5	13.7	5.4	chr12	51271180	51271346	(82003963)	+	MIR	SINE/MIR	80	262	(0)	850997
1933	11.1	2.5	0.0	chr12	51271661	51271930	(82003379)	+	AluSq2	SINE/Alu	29	305	(8)	850998
10398	21.5	4.2	1.3	chr12	54837798	54840949	(78434360)	C	L1PB3	LINE/L1	(3892)	2971	650	857030
6675	12.6	5.4	11.2	chr12	54992092	54993403	(78281906)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	1	857221
1913	14.8	3.9	2.0	chr12	54993623	54993927	(78281382)	C	AluJo	SINE/Alu	(1)	311	1	857222
2799	5.2	0.0	0.0	chr12	62932629	62932934	(70342375)	C	AluSp	SINE/Alu	(7)	306	1	868715
240	23.9	2.2	2.2	chr12	64679408	64679497	(68595812)	C	L1MC4a	LINE/L1	(1)	7881	7792	871614
15106	16.2	3.8	1.4	chr12	67337993	67339849	(65935460)	C	L1MA4A	LINE/L1	(3735)	3827	1932	875752
6039	14.3	5.3	2.3	chr12	68298654	68301255	(64974054)	+	L1PBa	LINE/L1	1179	3861	(3054)	877150
330	26.9	3.7	0.0	chr12	68733736	68733813	(64541496)	C	MamSINE1	SINE/tRNA-RTE	(204)	86	6	877973
1782	16.3	0.3	6.9	chr12	68733989	68734307	(64541002)	+	AluJo	SINE/Alu	1	298	(14)	877974
24	19.3	0.0	0.0	chr12	68808591	68808643	(64466666)	+	(GGCTCGG)n	Simple_repeat	1	53	(0)	878136
11630	19.8	5.3	1.1	chr12	69522238	69523860	(63751449)	C	L1PREC2	LINE/L1	(2457)	4309	2484	879445
5265	20.0	11.0	3.5	chr12	69523860	69525121	(63750188)	C	L1PREC2	LINE/L1	(5405)	1380	13	879445
2127	14.3	0.3	0.0	chr12	70008288	70008587	(63266722)	+	AluSz	SINE/Alu	1	301	(11)	880251
13763	18.2	2.1	1.5	chr12	70008588	70009948	(63265361)	+	L1M2	LINE/L1	3066	4460	(3102)	880249
13980	16.8	5.2	2.1	chr12	71859911	71863096	(61412213)	C	L1MA5	LINE/L1	(1142)	6420	3116	882999
2560	8.8	0.0	0.0	chr12	71863097	71863404	(61411905)	+	AluY	SINE/Alu	1	308	(3)	883004
21542	10.0	1.7	2.6	chr12	74066601	74072174	(59203135)	+	L1PA10	LINE/L1	840	6353	(0)	885778
5352	24.5	3.6	1.9	chr12	75435899	75438581	(57836728)	C	L1PA15-16	LINE/L1	(3607)	3308	765	887537
15909	18.2	3.2	3.8	chr12	79276694	79281674	(53993635)	+	L1PB3	LINE/L1	1934	6870	(0)	893300
3694	24.6	6.2	3.3	chr12	79953906	79956439	(53318870)	C	L1M3a	LINE/L1	(3802)	2574	356	894320
289	26.1	10.7	2.9	chr12	81246294	81246431	(52028878)	C	L1MDa	LINE/L1	(6221)	412	263	896162
5411	8.5	0.4	0.1	chr12	84575379	84576131	(48699178)	+	L1PA10	LINE/L1	1724	2478	(4005)	900449
15	15.2	2.0	7.7	chr12	85280157	85280207	(47995102)	+	(TCCC)n	Simple_repeat	1	52	(0)	901404
11995	21.7	4.1	0.9	chr12	86483826	86486376	(46788933)	+	L1P4a	LINE/L1	7	2653	(3830)	903033
51	0.0	0.0	0.0	chr12	86486377	86486420	(46788889)	+	(CA)n	Simple_repeat	1	44	(0)	903034
5052	20.3	2.2	2.0	chr12	88212395	88213808	(45061501)	+	L1M2	LINE/L1	2373	3724	(3838)	905205
4776	22.4	3.6	5.7	chr12	88394024	88395662	(44879647)	+	L1PB4	LINE/L1	1769	3407	(3442)	905452
11745	19.9	2.0	3.0	chr12	88705109	88708697	(44566612)	C	L1PB4	LINE/L1	(1141)	5705	1946	905878
12814	10.2	0.7	1.9	chr12	91556483	91560849	(41714460)	+	L1P3	LINE/L1	1	4349	(2112)	910096
14	20.4	3.7	3.6	chr12	92146392	92146445	(41128864)	+	(GTGCG)n	Simple_repeat	1	56	(0)	911016
13	18.9	4.5	2.2	chr12	93571265	93571308	(39704001)	+	(CGGCG)n	Simple_repeat	1	46	(0)	913737
16	8.2	0.0	0.0	chr12	93591426	93591451	(39683858)	+	(TGTC)n	Simple_repeat	1	26	(0)	913772
1071	28.6	5.0	6.2	chr12	93591999	93592606	(39682703)	C	L1ME4b	LINE/L1	(18)	874	291	913773
8699	17.4	6.0	5.2	chr12	95501733	95501979	(37773330)	C	L1M4c	LINE/L1	(4475)	1909	1653	917353
2078	15.3	0.0	4.6	chr12	95501980	95502305	(37773004)	C	AluJb	SINE/Alu	(1)	311	1	917356
18940	14.1	2.2	1.5	chr12	99618365	99625407	(33649902)	+	L1PA17	LINE/L1	2	6867	(2)	924133
14665	17.1	2.4	1.2	chr12	103565930	103570866	(29704443)	+	L1PA17	LINE/L1	2042	6919	(16)	930875
1378	18.1	8.0	6.3	chr12	103815187	103815437	(29459872)	+	L1MB7	LINE/L1	5815	6068	(116)	931340
1858	16.9	0.0	0.0	chr12	103815438	103815721	(29459588)	C	AluJo	SINE/Alu	(28)	284	1	931341
481	27.6	10.2	9.6	chr12	105064492	105064772	(28210537)	C	L2c	LINE/L2	(20)	3367	3085	933761
238	30.0	17.0	3.7	chr12	105064783	105065000	(28210309)	+	L2c	LINE/L2	2924	3176	(211)	933762
243	19.8	19.8	0.0	chr12	107310052	107310132	(25965177)	C	L2c	LINE/L2	(0)	3387	3287	937845
364	34.9	3.0	8.6	chr12	107310284	107310562	(25964747)	C	L2c	LINE/L2	(0)	3387	3125	937846
3583	14.4	5.1	6.3	chr12	110155612	110156500	(23118809)	C	L1M4c	LINE/L1	(3682)	3185	2238	944157
2293	14.2	0.0	0.0	chr12	110156501	110156796	(23118513)	C	AluSz	SINE/Alu	(16)	296	1	944160
975	32.1	7.3	3.9	chr12	112664717	112665228	(20610081)	+	LTR16E1	LTR/ERVL	5	535	(3)	949808
13	15.7	8.1	4.5	chr12	114684550	114684611	(18590698)	+	(GAGGCAG)n	Simple_repeat	1	67	(0)	954268
1903	13.6	3.2	2.9	chr12	116798562	116798871	(16476438)	C	AluSz	SINE/Alu	(1)	311	1	958958
2056	22.5	6.5	2.2	chr12	116798892	116799433	(16475876)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	61	958959
40	19.0	6.6	6.2	chr12	117876643	117876803	(15398506)	+	(AT)n	Simple_repeat	1	159	(0)	961276
2122	7.6	2.7	1.0	chr12	120292321	120292608	(12982701)	+	AluSg4	SINE/Alu	1	293	(17)	966632
1996	14.4	0.0	3.3	chr12	121909315	121909620	(11365689)	C	AluJo	SINE/Alu	(15)	297	2	970657
565	29.8	9.4	4.2	chr12	121909723	121910076	(11365233)	C	L1ME4b	LINE/L1	(317)	575	202	970658
14	12.7	0.0	0.0	chr12	123879172	123879197	(9396112)	+	(TCTG)n	Simple_repeat	1	26	(0)	975119
1776	16.7	0.3	0.3	chr12	124608264	124608545	(8666764)	C	AluJb	SINE/Alu	(30)	282	1	976393
962	23.1	9.2	12.4	chr12	124608546	124608852	(8666457)	C	L1MC3	LINE/L1	(130)	7655	7343	976392
2347	10.3	0.0	0.7	chr12	130858792	130859093	(2416216)	+	AluSx1	SINE/Alu	1	300	(12)	987346
339	29.0	2.7	3.7	chr12	130859095	130859284	(2416025)	+	L1ME4b	LINE/L1	356	543	(349)	987347
20	26.5	3.1	0.0	chr12	130859473	130859530	(2415779)	+	(AT)n	Simple_repeat	1	59	(0)	987348
842	14.4	0.0	1.5	chr12	132827789	132827920	(447389)	+	FLAM_C	SINE/Alu	4	133	(10)	989999
234	31.1	12.3	2.9	chr12	132828029	132828217	(447092)	+	L2b	LINE/L2	2993	3209	(217)	990000
22	3.8	0.0	0.0	chr12	133081345	133081371	(193938)	+	(AT)n	Simple_repeat	1	27	(0)	990481
577	12.5	7.5	5.8	chr12	133081374	133081477	(193832)	C	AluJr4	SINE/Alu	(14)	298	193	990482
16183	19.8	2.3	1.7	chr12	133173974	133177908	(97401)	+	L1PB4	LINE/L1	1149	5327	(1518)	990646
22	17.2	3.8	0.0	chr13	21477020	21477072	(92887256)	+	A-rich	Low_complexity	1	55	(0)	996176
716	21.8	10.9	1.6	chr13	21477080	21477335	(92886993)	C	LTR50	LTR/ERVL	(506)	289	7	996175
424	22.0	6.0	2.1	chr13	21477344	21477487	(92886841)	C	L1M5	LINE/L1	(301)	5822	5673	996177
4961	14.2	3.0	0.3	chr13	24575565	24576655	(89787673)	C	L1MA4A	LINE/L1	(3761)	3801	2682	1000470
3951	17.6	4.9	3.5	chr13	27208651	27208989	(87155339)	+	L1M4	LINE/L1	1546	1898	(5619)	1004520
1627	18.2	3.4	0.7	chr13	27208990	27209274	(87155054)	C	AluJb	SINE/Alu	(19)	293	1	1004524
3951	17.6	4.9	3.5	chr13	27209275	27209775	(87154553)	+	L1M4	LINE/L1	1899	2399	(5118)	1004520
228	28.2	4.9	4.9	chr13	28336244	28336325	(86028003)	C	UCON62	DNA?	(95)	82	1	1006576
319	25.4	0.0	4.3	chr13	31485326	31485395	(82878933)	C	MLT1J	LTR/ERVL-MaLR	(119)	329	263	1011378
369	22.9	9.9	0.0	chr13	31485752	31485860	(82878468)	C	MLT1J	LTR/ERVL-MaLR	(389)	123	3	1011378
16285	18.3	2.1	0.9	chr13	35369918	35373331	(78990997)	C	L1M2	LINE/L1	(3387)	4175	722	1017062
67	0.0	0.0	0.0	chr13	35476297	35476355	(78887973)	+	(CTG)n	Simple_repeat	1	59	(0)	1017168
16	22.0	2.3	2.2	chr13	35476620	35476663	(78887665)	+	(GT)n	Simple_repeat	1	45	(0)	1017169
14442	13.3	1.7	4.3	chr13	37157956	37161058	(77203270)	C	L1PA16	LINE/L1	(1446)	5403	2380	1019643
18693	16.5	4.3	2.2	chr13	40812799	40816859	(73547469)	+	L1PA16	LINE/L1	829	5395	(2746)	1024760
2367	21.2	5.1	0.5	chr13	41924876	41925569	(72438759)	+	L1MA9	LINE/L1	2621	3394	(4172)	1026559
3534	13.1	1.7	0.5	chr13	42445029	42445618	(71918710)	+	L1PA15-16	LINE/L1	2089	2685	(4168)	1027383
331	7.0	0.0	0.0	chr13	42445620	42445662	(71918666)	+	HY3	scRNA	1	43	(58)	1027384
346	10.2	0.0	0.0	chr13	42445663	42445711	(71918617)	+	L1PA15-16	LINE/L1	2675	2723	(4130)	1027383
1897	15.1	6.4	1.1	chr13	42445712	42446066	(71918262)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1027385
13267	17.2	8.0	2.7	chr13	44526763	44530984	(69833344)	+	L1MC2	LINE/L1	1527	6049	(713)	1030439
2628	7.0	0.3	1.3	chr13	48095346	48095659	(66268669)	C	AluY	SINE/Alu	(0)	311	1	1036247
2118	29.8	6.7	2.0	chr13	48779755	48780556	(65583772)	C	ERVL-E-int	LTR/ERVL	(509)	5158	4317	1037324
5731	18.5	7.1	3.9	chr13	48780559	48781989	(65582339)	C	L1PBb	LINE/L1	(3887)	2969	1485	1037325
43	0.0	0.0	0.0	chr13	49897904	49897942	(64466386)	+	(TTAT)n	Simple_repeat	1	39	(0)	1039269
2282	7.2	0.0	4.9	chr13	52194731	52195035	(62169293)	C	AluSx3	SINE/Alu	(21)	290	1	1042755
2813	18.9	1.8	4.0	chr13	52534659	52535671	(61828657)	+	L1M2	LINE/L1	3052	4036	(3526)	1043255
2267	8.7	0.0	3.5	chr13	52616906	52617215	(61747113)	+	AluSg	SINE/Alu	3	301	(9)	1043372
3330	26.2	2.6	3.8	chr13	54287752	54288925	(60075403)	C	L1PB3	LINE/L1	(3604)	3258	2051	1045710
19033	13.9	1.8	1.2	chr13	58455099	58459509	(55904819)	+	L1PA16	LINE/L1	2424	6863	(6)	1050772
17936	12.6	3.7	4.5	chr13	60666090	60670229	(53694099)	C	L1PA16	LINE/L1	(341)	6528	2412	1053840
2143	12.8	1.4	0.0	chr13	60670230	60670519	(53693809)	C	AluSx1	SINE/Alu	(18)	294	1	1053842
6961	17.9	8.6	7.7	chr13	61765292	61767029	(52597299)	C	MER52A	LTR/ERV1	(0)	1755	1	1055165
17442	17.3	1.9	3.8	chr13	62508644	62513010	(51851318)	C	L1PA16	LINE/L1	(1686)	4797	551	1056092
5494	26.1	8.0	1.7	chr13	63273917	63278549	(51085779)	+	L1M2	LINE/L1	241	6498	(517)	1057049
1337	28.6	10.7	4.4	chr13	63465913	63466306	(50898022)	+	L1M4c	LINE/L1	1335	1734	(4650)	1057316
2202	11.1	0.7	1.3	chr13	63466307	63466612	(50897716)	+	AluSc5	SINE/Alu	1	304	(5)	1057317
11368	17.2	0.9	2.5	chr13	65053913	65055319	(49309009)	+	L1P4a	LINE/L1	1982	3373	(3110)	1059274
11368	17.9	1.9	2.9	chr13	65056091	65057998	(49306330)	+	L1P4a	LINE/L1	3554	5443	(1040)	1059274
350	30.4	0.0	3.4	chr13	65058084	65058202	(49306126)	C	LTR16A	LTR/ERVL	(319)	132	18	1059277
4927	24.2	2.2	2.1	chr13	65314622	65316701	(49047627)	+	L1PA15-16	LINE/L1	1598	3445	(3470)	1059641
14579	17.0	5.0	1.7	chr13	65547597	65553309	(48811019)	C	L1PA13	LINE/L1	(8)	6775	874	1059951
1731	27.1	2.8	12.2	chr13	66095889	66096687	(48267641)	+	MLT1D-int	LTR/ERVL-MaLR	108	1033	(456)	1060609
38	0.0	0.0	0.0	chr13	66491386	66491418	(47872910)	+	(TG)n	Simple_repeat	1	33	(0)	1061085
1615	19.2	2.8	0.0	chr13	66935075	66935355	(47428973)	C	AluJb	SINE/Alu	(23)	289	1	1061642
904	33.0	1.8	0.9	chr13	67063013	67063348	(47300980)	C	MLT1I	LTR/ERVL-MaLR	(6)	405	67	1061815
421	26.6	4.2	5.4	chr13	67063363	67063529	(47300799)	C	MIRb	SINE/MIR	(8)	260	96	1061816
829	21.5	0.6	0.0	chr13	67221916	67222073	(47142255)	+	MER5A	DNA/hAT-Charlie	2	160	(29)	1062002
2746	23.7	5.6	0.4	chr13	69087020	69087831	(45276497)	+	L1MC	LINE/L1	2598	3454	(2692)	1064343
908	23.5	5.0	0.9	chr13	69087834	69088065	(45276263)	+	MLT1A0	LTR/ERVL-MaLR	124	365	(0)	1064344
487	17.5	0.9	1.7	chr13	69088116	69088231	(45276097)	C	L1MEg	LINE/L1	(2872)	3274	3160	1064345
15766	17.5	3.9	1.3	chr13	69209734	69214609	(45149719)	C	L1PA16	LINE/L1	(9)	6625	1615	1064522
188	37.1	0.0	0.0	chr13	69299110	69299179	(45065149)	C	L2c	LINE/L2	(54)	3333	3264	1064620
195	34.7	7.8	2.5	chr13	70172595	70172715	(44191613)	+	Penelope1_Vert	LINE/Penelope	877	1004	(83)	1065788
197	37.6	0.0	4.4	chr13	70172765	70172878	(44191450)	C	L2b	LINE/L2	(4)	3371	3263	1065789
8134	18.8	6.3	1.8	chr13	71052881	71056193	(43308135)	C	L1MA4A	LINE/L1	(2914)	4291	706	1066964
16	20.0	0.0	2.4	chr13	71360710	71360725	(43003603)	+	(TATTT)n	Simple_repeat	4	42	(0)	1067355
262	32.4	2.1	8.9	chr13	79770237	79770439	(34593889)	C	HAL1	LINE/L1	(700)	1807	1619	1079402
8889	21.3	5.0	2.7	chr13	79970627	79974921	(34389407)	C	L1PA17	LINE/L1	(2337)	4578	343	1079622
23	30.7	2.1	1.0	chr13	83083492	83083534	(31280794)	+	(TA)n	Simple_repeat	1	43	(0)	1083563
2621	10.7	9.3	0.0	chr13	83083535	83083975	(31280353)	+	LTR19A	LTR/ERV1	1	486	(0)	1083564
11718	16.2	2.1	2.7	chr13	84151768	84153473	(30210855)	C	L1PA15-16	LINE/L1	(3107)	3742	2041	1084872
3156	11.9	7.8	0.0	chr13	84645549	84646045	(29718283)	C	MER66C	LTR/ERV1	(14)	541	3	1085511
238	33.7	5.5	1.9	chr13	84760784	84760889	(29603439)	C	MER91C	DNA/hAT-Tip100	(0)	140	31	1085661
207	28.8	7.6	0.0	chr13	85175053	85175125	(29189203)	C	MIR	SINE/MIR	(54)	208	130	1086201
416	32.3	5.1	11.4	chr13	87842378	87842692	(26521636)	+	LTR41	LTR/ERVL	2	295	(473)	1089547
1308	29.9	6.0	3.4	chr13	87842708	87843209	(26521119)	+	LTR41	LTR/ERVL	225	740	(28)	1089548
77	9.2	5.4	1.9	chr13	89497332	89497478	(24866850)	+	GA-rich	Low_complexity	1	155	(0)	1091684
214	26.8	10.1	2.5	chr13	89497515	89497644	(24866684)	C	L2c	LINE/L2	(248)	3139	2995	1091685
1883	31.2	9.8	2.5	chr13	90447072	90447787	(23916541)	+	MER45C	DNA/hAT-Tip100	179	952	(1)	1092938
1107	35.2	12.1	1.8	chr13	90447800	90448945	(23915383)	+	L2a	LINE/L2	1987	3276	(150)	1092939
75	9.4	3.4	0.0	chr13	91384777	91384893	(22979435)	+	(GA)n	Simple_repeat	1	121	(0)	1094173
1891	18.4	1.6	4.0	chr13	93047241	93047739	(21316589)	C	L1PA15-16	LINE/L1	(3605)	3257	2767	1096363
1028	9.8	0.0	1.5	chr13	93047743	93047875	(21316453)	C	AluSz	SINE/Alu	(181)	131	1	1096364
1625	19.2	3.5	3.4	chr13	93047883	93048378	(21315950)	C	L1PA15-16	LINE/L1	(4114)	2752	2102	1096363
2265	10.8	0.3	0.3	chr13	95303419	95303715	(19060613)	+	AluSq	SINE/Alu	1	297	(16)	1099760
918	17.5	0.0	7.2	chr13	95303716	95303737	(19060591)	+	AluJr4	SINE/Alu	240	258	(54)	1099759
779	16.7	0.0	0.0	chr13	95303740	95303859	(19060469)	+	AluJo	SINE/Alu	18	137	(175)	1099761
1714	16.8	2.1	0.3	chr13	95303862	95304147	(19060181)	+	AluJr	SINE/Alu	5	295	(17)	1099762
331	18.4	10.3	1.1	chr13	95304157	95304244	(19060084)	+	L1MC5a	LINE/L1	2655	2751	(26)	1099763
7839	6.8	0.2	0.2	chr13	95316840	95317805	(19046523)	+	LTR13A	LTR/ERVK	1	966	(0)	1099802
3705	23.5	6.7	2.5	chr13	95696959	95698656	(18665672)	C	L1PA15-16	LINE/L1	(3947)	2918	1268	1100537
15395	17.0	6.9	1.0	chr13	95958614	95962772	(18401556)	+	L1MA4A	LINE/L1	718	5132	(2430)	1100915
181	20.8	0.0	14.3	chr13	96089578	96089633	(18274695)	+	L2b	LINE/L2	3320	3367	(8)	1101085
14547	20.6	7.8	0.7	chr13	96600361	96602164	(17762164)	C	L1PB3	LINE/L1	(3689)	3226	1251	1101835
4912	22.4	5.0	1.0	chr13	96661199	96662497	(17701831)	C	L1PA15-16	LINE/L1	(3559)	3290	1926	1101907
301	27.9	1.1	2.3	chr13	98173436	98173523	(16190805)	+	Charlie19a	DNA/hAT-Charlie	14	100	(286)	1104238
249	15.2	0.0	0.0	chr13	98174076	98174121	(16190207)	+	L1ME4a	LINE/L1	5960	6005	(119)	1104239
10259	16.7	5.3	3.3	chr13	102811031	102811530	(11552798)	C	L1M4c	LINE/L1	(4450)	2400	1908	1111309
700	27.1	12.3	10.7	chr13	111604028	111605065	(2759263)	C	HAL1	LINE/L1	(383)	2124	1068	1122713
1401	21.8	10.0	0.5	chr13	112714768	112715173	(1649155)	C	L1MB3	LINE/L1	(3)	6180	5732	1123861
2098	23.7	4.1	7.8	chr13	114004203	114005208	(359120)	+	L1PB4	LINE/L1	5125	6081	(75)	1125191
11	21.1	8.2	0.0	chr13	114132494	114132542	(231786)	+	(CGCGCC)n	Simple_repeat	1	53	(0)	1125266
6007	17.0	3.4	0.9	chr14	24596309	24598301	(82445417)	C	L1M2	LINE/L1	(1632)	5933	2975	1134425
16	17.5	2.6	0.0	chr14	25050232	25050270	(81993448)	+	G-rich	Low_complexity	1	40	(0)	1135009
704	23.8	14.0	2.3	chr14	25050577	25050834	(81992884)	C	MER102b	DNA/hAT-Charlie	(8)	333	41	1135010
10772	20.6	4.5	2.3	chr14	28388813	28391402	(78652316)	C	L1PB4	LINE/L1	(2381)	4468	1863	1139210
3109	25.9	6.5	5.1	chr14	29262208	29264140	(77779578)	C	L1MC3	LINE/L1	(4629)	2122	75	1140269
2910	9.4	16.5	0.6	chr14	31982128	31982637	(75061081)	+	THE1C-int	LTR/ERVL-MaLR	1	591	(1040)	1144474
10065	15.5	0.8	1.1	chr14	31982652	31983650	(75060068)	C	L1PA16	LINE/L1	(4030)	2604	1609	1144471
1508	10.0	1.9	0.0	chr14	35290995	35291204	(71752514)	C	AluJr	SINE/Alu	(14)	298	85	1149729
2599	4.6	0.0	1.0	chr14	35291213	35291519	(71752199)	C	AluY	SINE/Alu	(7)	304	1	1149730
2167	12.5	0.0	1.4	chr14	35458019	35458313	(71585405)	C	AluSz	SINE/Alu	(21)	291	1	1150071
2028	24.0	3.2	6.2	chr14	35458314	35458756	(71584962)	C	L1M2a	LINE/L1	(4347)	3218	2812	1150065
1655	25.4	1.2	0.5	chr14	35458754	35459165	(71584553)	+	L1M2a	LINE/L1	1131	1545	(5623)	1150072
15446	12.0	2.1	0.7	chr14	36035325	36037704	(71006014)	+	Tigger1	DNA/TcMar-Tigger	5	2418	(0)	1151050
1490	24.0	5.7	8.8	chr14	36037705	36037947	(71005771)	C	L1M3b	LINE/L1	(4425)	3140	2917	1151047
1391	28.9	1.9	0.2	chr14	36037935	36038392	(71005326)	C	L1M3b	LINE/L1	(4873)	2623	2158	1151047
14	0.0	0.0	0.0	chr14	36320608	36320625	(70723093)	+	(CCA)n	Simple_repeat	1	18	(0)	1151418
1896	15.2	3.0	1.8	chr14	39338960	39339294	(67704424)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	1155594
9039	3.5	0.4	0.2	chr14	41540396	41541464	(65502254)	C	MER11C	LTR/ERVK	(0)	1071	1	1158222
9809	21.3	3.1	5.2	chr14	41541465	41544240	(65499478)	C	L1PA16	LINE/L1	(4145)	2790	4	1158219
4430	22.7	4.3	4.0	chr14	44455908	44457170	(62586548)	+	L1M2	LINE/L1	2036	3318	(4248)	1161783
1525	22.4	0.0	3.4	chr14	44457171	44457491	(62586227)	+	AluJr	SINE/Alu	1	310	(2)	1161784
7491	18.1	1.6	1.4	chr14	46780880	46783463	(60260255)	+	L1P4a	LINE/L1	1130	3549	(3217)	1164713
16	16.9	0.0	0.0	chr14	49892575	49892601	(57151117)	+	A-rich	Low_complexity	1	27	(0)	1168853
12625	14.5	3.0	5.4	chr14	50569433	50570374	(56473344)	C	L1ME3Cz	LINE/L1	(4395)	1988	1057	1170170
4691	25.1	6.3	2.5	chr14	51259520	51261732	(55781986)	C	L1MA7	LINE/L1	(3894)	3752	1768	1171201
3372	24.1	3.9	2.7	chr14	54823528	54824883	(52218835)	+	L1M4c	LINE/L1	2007	3337	(4228)	1176501
11786	15.6	1.1	2.1	chr14	60049176	60049991	(46993727)	C	L1PA11	LINE/L1	(3943)	4220	3415	1184502
12	20.4	4.1	3.9	chr14	60721600	60721648	(46322070)	+	G-rich	Low_complexity	1	51	(0)	1185455
343	33.3	1.9	3.4	chr14	65961293	65961500	(41082218)	+	L2a	LINE/L2	3213	3417	(9)	1193953
2904	24.5	4.5	5.0	chr14	67033578	67034209	(40009509)	+	L1MB2	LINE/L1	1478	2127	(4519)	1195361
15556	12.2	2.3	7.4	chr14	67844814	67845385	(39198333)	C	L1PA16	LINE/L1	(3755)	3011	2479	1196816
2148	12.9	0.0	0.0	chr14	67845386	67845665	(39198053)	+	AluJb	SINE/Alu	1	280	(32)	1196820
6973	17.4	3.4	3.0	chr14	67848316	67849270	(39194448)	C	L1PA15-16	LINE/L1	(3729)	3120	2144	1196821
229	22.2	9.1	8.2	chr14	69610978	69611075	(37432643)	+	MER5A	DNA/hAT-Charlie	44	142	(47)	1199887
182	27.7	6.7	6.7	chr14	69611092	69611180	(37432538)	C	L3	LINE/CR1	(3359)	740	652	1199888
14	18.8	0.0	5.0	chr14	69611256	69611295	(37432423)	+	(AAT)n	Simple_repeat	1	40	(0)	1199889
13	17.4	0.0	2.9	chr14	69880165	69880198	(37163520)	+	G-rich	Low_complexity	1	34	(0)	1200350
541	17.0	9.7	0.0	chr14	73233077	73233188	(33810530)	+	MER63A	DNA/hAT-Blackjack	4	127	(83)	1205796
187	29.6	2.7	2.7	chr14	73233215	73233287	(33810431)	C	MamRTE1	LINE/RTE-BovB	(1780)	2032	1960	1205797
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
1704	20.4	0.3	0.0	chr14	77418530	77418828	(29624890)	C	AluJo	SINE/Alu	(12)	300	1	1214171
3790	23.8	7.2	4.1	chr14	77418829	77419060	(29624658)	C	L1MB2	LINE/L1	(4482)	1902	1659	1214163
2334	11.6	0.0	0.3	chr14	77419061	77419371	(29624347)	C	AluSq2	SINE/Alu	(2)	311	2	1214172
13	13.2	0.0	0.0	chr14	81388957	81388981	(25654737)	+	(CTC)n	Simple_repeat	1	25	(0)	1220547
2117	19.4	5.6	0.2	chr14	91761879	91762281	(15281437)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1236277
2709	25.0	1.9	2.8	chr14	91762282	91762567	(15281151)	+	L1PB4	LINE/L1	3167	3454	(4115)	1236273
2946	12.0	1.9	1.2	chr14	91762577	91763174	(15280544)	C	MER4E	LTR/ERV1	(0)	766	1	1236278
377	26.0	3.3	0.6	chr14	92311186	92311293	(14732425)	C	MIR3	SINE/MIR	(123)	145	38	1237324
591	25.4	0.9	0.9	chr14	92425392	92425605	(14618113)	C	MER89	LTR/ERV1	(245)	314	3	1237531
401	28.6	2.1	0.0	chr14	92425608	92425698	(14618020)	+	MIR3	SINE/MIR	63	155	(53)	1237536
12404	13.6	6.2	1.3	chr14	92590681	92592122	(14451596)	+	L1MCa	LINE/L1	512	2035	(4473)	1237842
959	26.3	9.8	5.8	chr14	96045789	96046240	(10997478)	C	MLT1H1	LTR/ERVL-MaLR	(40)	515	44	1244151
400	31.3	0.0	0.9	chr14	98624832	98624947	(8418771)	+	MIRc	SINE/MIR	40	154	(114)	1248681
784	31.7	11.4	3.9	chr14	99547956	99548674	(7495044)	+	L1ME3Cz	LINE/L1	21	574	(423)	1250181
364	33.5	19.5	0.0	chr14	99632215	99632453	(7411265)	C	L3	LINE/CR1	(3)	4096	3800	1250322
324	35.2	11.7	0.7	chr14	99632488	99632852	(7410866)	C	L3b	LINE/CR1	(515)	3584	3215	1250323
397	7.2	0.2	0.0	chr14	99927754	99928248	(7115470)	+	(GTG)n	Simple_repeat	1	496	(0)	1250850
17	26.8	0.0	0.0	chr14	100969072	100969120	(6074598)	+	(ATAA)n	Simple_repeat	1	49	(0)	1252630
405	27.3	2.2	5.9	chr14	106806658	106806697	(237021)	+	MER89-int	LTR/ERV1	2822	2851	(3950)	1261089
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
2465	11.4	0.0	0.0	chr15	34049889	34050187	(67941002)	C	AluSx1	SINE/Alu	(13)	299	1	1282190
23357	9.6	1.0	1.5	chr15	34050188	34053017	(67938172)	+	L1PA11	LINE/L1	3267	6096	(1485)	1282184
23	18.4	2.0	0.0	chr15	41116161	41116210	(60874979)	+	(GGC)n	Simple_repeat	1	51	(0)	1292535
254	22.6	6.1	8.8	chr15	45022455	45022556	(56968633)	+	MER5A1	DNA/hAT-Charlie	11	109	(57)	1299948
2047	4.7	4.9	0.0	chr15	45022727	45022979	(56968210)	+	AluY	SINE/Alu	1	266	(45)	1299949
22285	8.8	2.1	1.9	chr15	52164655	52167387	(49823802)	+	L1PA11	LINE/L1	1102	3883	(2448)	1310842
19774	13.7	2.3	1.3	chr15	53935529	53939787	(48051402)	+	L1PA10	LINE/L1	10	4254	(2207)	1313523
10595	15.4	3.2	2.8	chr15	55554498	55555521	(46435668)	+	L1PA10	LINE/L1	3109	4153	(4010)	1315772
1400	1.3	0.0	0.0	chr15	55555522	55555680	(46435509)	+	L1PA4	LINE/L1	5991	6149	(6)	1315776
2043	16.2	2.3	2.8	chr15	58423067	58423584	(43567605)	+	MLT2A2	LTR/ERVL	1	517	(44)	1320140
15	12.6	0.0	0.0	chr15	66702697	66702723	(35288466)	+	(TTTC)n	Simple_repeat	1	27	(0)	1335299
2251	11.2	0.0	1.3	chr15	68270679	68270983	(33720206)	+	AluSx	SINE/Alu	1	301	(11)	1338046
253	25.9	1.7	1.4	chr15	68271080	68271167	(33720022)	+	MIR	SINE/MIR	79	174	(94)	1338047
1098	28.7	6.0	1.5	chr15	68271191	68271650	(33719539)	+	L1ME4a	LINE/L1	5520	6001	(123)	1338042
369	34.6	11.5	0.7	chr15	68668325	68668612	(33322577)	C	L2a	LINE/L2	(79)	3347	3025	1338797
311	30.9	4.1	0.0	chr15	68668632	68668725	(33322464)	C	L2a	LINE/L2	(485)	2934	2837	1338797
1950	10.4	0.4	0.0	chr15	68668797	68669047	(33322142)	+	AluSp	SINE/Alu	1	252	(61)	1338798
17	5.0	0.0	0.0	chr15	68843881	68843901	(33147288)	+	(CA)n	Simple_repeat	1	21	(0)	1339162
326	28.1	15.4	1.3	chr15	68844089	68844288	(33146901)	C	LTR33B	LTR/ERVL	(284)	219	24	1339163
10867	16.1	7.6	2.2	chr15	69222807	69224932	(32766257)	C	L1MB3	LINE/L1	(4113)	2271	22	1339825
236	21.7	6.2	0.0	chr15	69414047	69414106	(32577083)	+	MLT1L	LTR/ERVL-MaLR	474	537	(73)	1340178
233	40.8	9.2	0.4	chr15	70132005	70132233	(31858956)	C	L3	LINE/CR1	(239)	3860	3610	1341528
1951	27.7	4.2	1.4	chr15	70324571	70325120	(31666069)	+	MLT1K	LTR/ERVL-MaLR	6	571	(24)	1341946
2363	10.7	0.0	0.3	chr15	70829130	70829438	(31161751)	C	AluSc8	SINE/Alu	(3)	308	1	1342818
499	18.2	0.0	14.3	chr15	70829439	70829496	(31161693)	+	MER5B	DNA/hAT-Charlie	119	172	(6)	1342816
451	28.6	14.7	0.5	chr15	70829564	70829756	(31161433)	C	MIRc	SINE/MIR	(22)	246	22	1342819
990	21.9	1.9	1.4	chr15	71281301	71281513	(30709676)	+	Tigger12c	DNA/TcMar-Tigger	521	734	(0)	1343485
265	25.3	13.9	0.0	chr15	74889212	74889298	(27101891)	C	MIRb	SINE/MIR	(66)	202	102	1349708
951	24.8	9.7	5.6	chr15	74889338	74889909	(27101280)	+	L2a	LINE/L2	2817	3426	(0)	1349709
255	34.5	2.6	7.4	chr15	75841153	75841274	(26149915)	+	L2c	LINE/L2	3268	3383	(4)	1351609
416	20.2	5.7	0.0	chr15	75841650	75841748	(26149441)	+	Charlie4z	DNA/hAT-Charlie	39	143	(24)	1351615
1144	27.0	11.2	3.0	chr15	78456989	78457784	(23533405)	C	HAL1	LINE/L1	(329)	2178	1412	1355943
619	29.7	10.8	1.7	chr15	80113208	80113443	(21877746)	C	MER102b	DNA/hAT-Charlie	(80)	261	2	1359011
17093	13.3	1.4	6.8	chr15	81212772	81214198	(20776991)	C	L1P4a	LINE/L1	(2890)	3593	2218	1360914
14339	17.4	1.2	0.5	chr15	81214205	81216591	(20774598)	C	L1P4a	LINE/L1	(4102)	2591	1	1360918
738	28.1	0.7	0.3	chr15	81841488	81841679	(20149510)	C	MIRb	SINE/MIR	(19)	249	58	1361891
530	30.3	15.8	0.0	chr15	81841989	81842206	(20148983)	+	MIRb	SINE/MIR	7	265	(3)	1361892
10113	16.0	6.6	2.1	chr15	81920472	81922680	(20068509)	+	L1M4c	LINE/L1	423	2739	(3643)	1362030
8737	20.2	8.3	5.3	chr15	82604516	82605756	(19385433)	+	L1M4	LINE/L1	1540	2784	(4083)	1363125
5910	12.4	0.3	1.0	chr15	83165825	83166570	(18824619)	+	L1PA16	LINE/L1	2057	2798	(4055)	1364174
2289	13.0	8.2	4.2	chr15	83166571	83166980	(18824209)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1364175
180	32.4	5.2	10.5	chr15	85168688	85168849	(16822340)	+	MER5A	DNA/hAT-Charlie	19	171	(18)	1367351
184	34.2	8.8	0.0	chr15	85168824	85168896	(16822293)	C	MIR	SINE/MIR	(78)	184	105	1367352
9269	16.1	5.8	1.7	chr15	91079161	91080521	(10910668)	C	L1MC1	LINE/L1	(4575)	1933	502	1377667
969	26.8	10.2	0.3	chr15	92377124	92377460	(9613729)	+	LTR16A	LTR/ERVL	1	374	(77)	1379771
3531	22.1	2.6	5.6	chr15	93196149	93196968	(8794221)	C	L1ME3G	LINE/L1	(6719)	798	4	1381181
1014	33.4	11.6	2.4	chr15	93438125	93438995	(8552194)	+	LTR78	LTR/ERV1	307	1264	(40)	1381654
6036	19.7	3.3	3.1	chr15	94130897	94133308	(7857881)	C	L1PB4	LINE/L1	(2699)	4216	1796	1382679
6940	16.2	0.7	2.7	chr15	94907967	94909621	(7081568)	C	L1PA16	LINE/L1	(2852)	3997	2386	1383681
6940	19.5	1.7	0.8	chr15	94909627	94911181	(7080008)	C	L1PA16	LINE/L1	(5385)	1468	9	1383681
449	26.0	17.6	0.6	chr15	96308723	96308896	(5682293)	+	MIRb	SINE/MIR	2	211	(57)	1385706
14	25.7	2.2	0.0	chr15	96776135	96776180	(5215009)	+	(CCTT)n	Simple_repeat	1	47	(0)	1386341
16	17.5	5.5	3.5	chr15	99565477	99565531	(2425658)	+	(GGC)n	Simple_repeat	1	58	(0)	1390313
206	31.3	5.7	0.0	chr15	101491600	101491698	(499491)	+	MIRc	SINE/MIR	14	118	(150)	1392853
2079	29.4	9.7	8.3	chr15	101718324	101719467	(271722)	+	MLT1J2-int	LTR/ERVL-MaLR	233	1387	(0)	1393172
462	28.8	7.4	5.0	chr15	101719468	101719829	(271360)	+	MLT1J2	LTR/ERVL-MaLR	1	331	(117)	1393172
725	20.0	10.4	0.0	chr15	101719857	101720011	(271178)	C	MER5A	DNA/hAT-Charlie	(16)	173	1	1393174
21	17.8	3.9	0.0	chr16	340024	340075	(89998270)	+	(TTC)n	Simple_repeat	1	54	(0)	1394610
464	31.2	4.2	0.5	chr16	1025755	1025960	(89312385)	C	MER2	DNA/TcMar-Tigger	(130)	215	2	1395420
2354	22.8	5.7	3.5	chr16	2802897	2804020	(87534325)	C	L1M4	LINE/L1	(3755)	3251	1910	1397936
258	26.9	0.0	0.0	chr16	2804123	2804174	(87534171)	C	MIRc	SINE/MIR	(104)	164	113	1397953
2777	27.1	3.5	3.2	chr16	3423879	3424604	(86913741)	C	L1MA9	LINE/L1	(5061)	2544	1754	1399136
241	31.1	0.0	0.0	chr16	10918678	10918751	(79419594)	+	MIRc	SINE/MIR	92	167	(63)	1414560
188	27.0	13.8	2.0	chr16	14633510	14633611	(75704734)	C	MIRc	SINE/MIR	(114)	154	39	1422540
12565	16.1	3.2	1.5	chr16	17052152	17054546	(73283799)	C	L1PA16	LINE/L1	(3756)	2727	294	1428217
715	29.3	19.1	0.0	chr16	20763126	20763624	(69574721)	C	L2a	LINE/L2	(0)	3426	2808	1436430
1088	27.2	6.9	1.8	chr16	21522954	21523338	(68815007)	+	L1MB5	LINE/L1	5747	6152	(22)	1438061
466	8.6	0.0	5.8	chr16	24042063	24042148	(66296197)	C	L1PA13	LINE/L1	(2)	6161	6081	1443741
184	17.9	9.3	0.0	chr16	24042343	24042381	(66295964)	C	MIR3	SINE/MIR	(83)	125	83	1443742
1377	25.5	14.6	2.8	chr16	27191387	27191911	(63146434)	+	MLT1K	LTR/ERVL-MaLR	7	595	(0)	1450588
23	10.9	0.0	2.4	chr16	29691994	29692035	(60646310)	+	(GTGTGC)n	Simple_repeat	1	42	(0)	1456321
37	0.0	2.6	0.0	chr16	29692249	29692286	(60646059)	+	(TTAT)n	Simple_repeat	1	39	(0)	1456322
2181	4.3	5.4	0.3	chr16	29692299	29692580	(60645765)	+	AluY	SINE/Alu	1	297	(14)	1456323
1913	11.5	7.8	0.7	chr16	29774010	29774296	(60564049)	+	AluSg	SINE/Alu	2	310	(0)	1456543
308	24.3	0.0	9.8	chr16	29774343	29774465	(60563880)	+	LTR85a	LTR/Gypsy?	590	700	(2)	1456544
196	26.1	0.0	0.0	chr16	30921896	30921941	(59416404)	C	MIR3	SINE/MIR	(0)	208	163	1459203
333	27.1	7.0	10.7	chr16	30921952	30922100	(59416245)	C	MIRb	SINE/MIR	(30)	238	96	1459204
2301	6.9	0.3	0.3	chr16	31117090	31117369	(59220976)	+	AluSc	SINE/Alu	1	280	(29)	1459638
34	0.0	0.0	0.0	chr16	31117370	31117401	(59220944)	+	(AAAT)n	Simple_repeat	1	32	(0)	1459639
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
2244	8.4	4.7	0.0	chr16	46786799	46787082	(43551263)	+	AluSq2	SINE/Alu	1	298	(15)	1466048
1724	26.3	15.0	4.3	chr16	46787083	46787323	(43551022)	+	L1MA8	LINE/L1	2004	2269	(4465)	1466047
2173	11.2	2.2	2.2	chr16	46787324	46787634	(43550711)	+	AluSz6	SINE/Alu	1	311	(1)	1466049
579	29.9	9.4	0.2	chr16	50578044	50578418	(39759927)	C	MLT1J2	LTR/ERVL-MaLR	(65)	383	1	1472777
10639	16.2	3.9	0.3	chr16	52245750	52248782	(38089563)	+	L1P4a	LINE/L1	1	3615	(3300)	1475716
13056	10.8	1.1	1.9	chr16	54661371	54665244	(35673101)	+	L1P3	LINE/L1	11	3892	(2569)	1479930
1995	12.5	1.1	0.0	chr16	55018354	55018632	(35319713)	+	AluSq2	SINE/Alu	17	298	(15)	1480588
210	35.5	0.8	8.2	chr16	55018708	55018842	(35319503)	C	MIRb	SINE/MIR	(114)	154	30	1480589
330	21.4	3.9	0.7	chr16	55019355	55020205	(35318140)	+	(CA)n	Simple_repeat	1	884	(0)	1480590
230	34.6	0.9	0.9	chr16	58331265	58331369	(32006976)	C	L2c	LINE/L2	(2)	3385	3281	1486881
239	25.0	1.4	2.7	chr16	58331635	58331708	(32006637)	C	MER5B	DNA/hAT-Charlie	(60)	118	46	1486882
2489	17.4	4.7	2.6	chr16	58359663	58360320	(31978025)	C	L1M1	LINE/L1	(3752)	3807	3163	1486928
15540	15.6	2.9	1.6	chr16	58360317	58362898	(31975447)	C	L1M1	LINE/L1	(4948)	2617	1	1486928
17434	16.9	3.3	1.7	chr16	60133608	60138976	(30199369)	C	L1PA17	LINE/L1	(1)	6934	1509	1489827
2335	10.0	0.0	0.0	chr16	66545544	66545842	(23792503)	+	AluSx	SINE/Alu	3	301	(11)	1499939
1205	21.6	6.9	5.0	chr16	66545843	66546028	(23792317)	+	L1MB7	LINE/L1	5877	6068	(116)	1499938
1493	16.4	0.0	0.0	chr16	66546033	66546258	(23792087)	+	AluJb	SINE/Alu	86	311	(1)	1499940
450	12.3	9.3	3.5	chr16	66546259	66546388	(23791957)	+	L1MB7	LINE/L1	6058	6184	(0)	1499938
184	29.3	3.3	4.9	chr16	67783579	67783639	(22554706)	+	L3	LINE/CR1	4023	4082	(17)	1502336
2802	24.1	10.1	1.2	chr16	72456266	72457950	(17880395)	C	L1MA10	LINE/L1	(3267)	3377	1440	1511480
19759	8.3	4.4	2.0	chr16	72730673	72736869	(17601476)	C	L1PA10	LINE/L1	(3)	6350	5	1511922
30	3.4	0.0	0.0	chr16	73036137	73036166	(17302179)	+	(CT)n	Simple_repeat	1	30	(0)	1512312
22	22.2	2.9	6.7	chr16	73036557	73036658	(17301687)	+	G-rich	Low_complexity	1	105	(0)	1512313
721	26.3	10.0	1.4	chr16	74695887	74696299	(15642046)	+	MLT1J2	LTR/ERVL-MaLR	4	428	(20)	1515244
17707	9.4	4.0	1.6	chr16	74808559	74811250	(15527095)	+	MER4-int	LTR/ERV1	3837	6596	(2)	1515489
3379	8.9	5.1	0.0	chr16	74811257	74811704	(15526641)	+	MER4A1	LTR/ERV1	1	472	(0)	1515489
8448	14.1	2.3	1.1	chr16	76186904	76188612	(14149733)	+	L1P4a	LINE/L1	1197	2935	(3548)	1518038
7253	17.0	1.8	0.9	chr16	76740525	76742246	(13596099)	+	L1P4a	LINE/L1	1242	2981	(3785)	1518790
1984	16.9	3.5	6.1	chr16	77335138	77335659	(13002686)	+	L1MA3	LINE/L1	5798	6305	(0)	1519644
879	22.2	4.3	1.8	chr16	80101155	80101379	(10236966)	C	L5	LINE/RTE-X	(8)	2257	2027	1524729
1052	24.7	18.6	2.6	chr16	80101566	80101947	(10236398)	+	LTR16C	LTR/ERVL	29	485	(4)	1524730
13396	13.1	2.9	2.2	chr16	81974832	81976733	(8361612)	+	L1PA16	LINE/L1	1992	3903	(2946)	1528421
525	11.4	0.0	0.0	chr16	83575916	83575994	(6762351)	C	L1MB5	LINE/L1	(0)	6174	6096	1531245
4024	19.6	5.2	2.8	chr16	83575995	83576972	(6761373)	C	L1MB5	LINE/L1	(7)	6167	5178	1531246
727	28.6	8.4	5.1	chr16	84878238	84878573	(5459772)	C	L1ME1	LINE/L1	(70)	6109	5765	1533743
1844	8.6	5.2	2.9	chr17	917162	917440	(82340001)	C	AluSx3	SINE/Alu	(17)	294	9	1546033
12	29.0	0.0	2.1	chr17	917801	917848	(82339593)	+	A-rich	Low_complexity	1	48	(0)	1546034
434	32.3	7.8	5.4	chr17	1113023	1113261	(82144180)	C	L2b	LINE/L2	(4)	3371	3127	1546370
2408	6.3	0.3	1.0	chr17	1258956	1259256	(81998185)	C	AluSx1	SINE/Alu	(13)	299	1	1546709
1623	11.1	5.9	6.2	chr17	1259671	1259976	(81997465)	+	AluY	SINE/Alu	2	306	(5)	1546710
1230	23.9	7.2	5.5	chr17	2892124	2892333	(80365108)	C	HAL1	LINE/L1	(1018)	1489	1272	1550192
930	30.8	5.0	6.5	chr17	2892341	2892848	(80364593)	C	MLT1G	LTR/ERVL-MaLR	(51)	540	39	1550196
255	31.2	10.3	0.0	chr17	3673876	3673971	(79583470)	C	MIR3	SINE/MIR	(11)	197	91	1551487
1063	33.6	4.4	6.4	chr17	3722526	3723277	(79534164)	C	L2a	LINE/L2	(319)	3107	2371	1551580
14	24.1	0.0	0.0	chr17	7990074	7990112	(75267329)	+	G-rich	Low_complexity	1	39	(0)	1559894
266	22.7	0.0	4.3	chr17	8808942	8809010	(74448431)	+	L1M6B	LINE/L1	75	140	(229)	1561510
2010	22.6	2.5	0.0	chr17	8809060	8809493	(74447948)	+	L1PA15-16	LINE/L1	2445	2889	(3964)	1561511
1224	14.2	0.0	7.1	chr17	8809499	8809709	(74447732)	+	AluJb	SINE/Alu	2	197	(115)	1561512
2613	4.9	1.0	0.0	chr17	8966166	8966470	(74290971)	C	AluSc	SINE/Alu	(1)	308	1	1561791
356	24.2	0.0	3.2	chr17	15073704	15073797	(68183644)	C	UCON29	DNA/PiggyBac?	(20)	419	329	1572481
2418	24.2	4.0	3.7	chr17	15532102	15532724	(67724717)	C	L1M4	LINE/L1	(6878)	639	15	1573220
1106	14.0	0.0	0.0	chr17	16386580	16386743	(66870698)	+	AluJr	SINE/Alu	139	302	(10)	1574869
338	15.5	0.0	6.6	chr17	16387027	16387102	(66870339)	+	AluJb	SINE/Alu	231	301	(1)	1574863
3777	18.5	2.9	2.1	chr17	17048563	17049328	(66208113)	+	L1MB5	LINE/L1	5365	6136	(38)	1576025
786	25.9	17.1	2.8	chr17	18094186	18094688	(65162753)	C	L2a	LINE/L2	(0)	3426	2842	1577944
2516	23.8	3.7	3.8	chr17	18810944	18811569	(64445872)	+	L1M4	LINE/L1	15	639	(6878)	1579176
2145	12.0	0.0	0.7	chr17	21154026	21154324	(62103117)	+	AluSq2	SINE/Alu	1	297	(16)	1583770
16200	13.2	4.9	4.1	chr17	21154325	21156324	(62101117)	+	L1MC1	LINE/L1	1520	3521	(2800)	1583765
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
12	11.1	3.2	3.1	chr17	29331154	29331184	(53926257)	+	A-rich	Low_complexity	1	32	(0)	1590392
2872	24.0	7.7	7.8	chr17	30413574	30414293	(52843148)	C	L2a	LINE/L2	(1)	3425	2730	1592537
20	11.6	0.0	0.0	chr17	30970177	30970205	(52287236)	+	(T)n	Simple_repeat	1	29	(0)	1593735
446	20.2	5.3	2.4	chr17	30970446	30970572	(52286869)	+	MER5B	DNA/hAT-Charlie	9	139	(39)	1593736
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
1192	13.5	9.6	0.5	chr17	34171143	34171351	(49086090)	C	MER30	DNA/hAT-Charlie	(0)	230	1	1600003
235	30.8	13.1	4.0	chr17	34171407	34171558	(49085883)	C	MamGypLTR3a	LTR/Gypsy	(254)	727	560	1600002
17801	16.6	2.8	3.8	chr17	36049654	36050703	(47206738)	+	L1PA17	LINE/L1	2606	3616	(3299)	1603323
201	24.9	17.5	0.0	chr17	37828545	37828669	(45428772)	C	MIRb	SINE/MIR	(101)	167	12	1606625
2903	16.7	3.0	7.0	chr17	38390101	38390640	(44866801)	C	L1MB7	LINE/L1	(1171)	4975	4461	1607767
61	0.0	0.0	0.0	chr17	38390641	38390695	(44866746)	+	(TTCC)n	Simple_repeat	1	55	(0)	1607773
1553	18.6	4.8	1.7	chr17	38390696	38390996	(44866445)	C	AluJb	SINE/Alu	(1)	311	1	1607774
5105	24.4	6.2	4.3	chr17	41386023	41386966	(41870475)	C	L1M3d	LINE/L1	(4498)	1886	951	1613544
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
2296	13.2	0.0	0.0	chr17	46279173	46279483	(36977958)	C	AluSx1	SINE/Alu	(1)	311	1	1623767
1873	17.7	2.2	0.0	chr17	46279490	46279794	(36977647)	C	AluJb	SINE/Alu	(0)	312	1	1623768
641	28.6	14.8	9.7	chr17	46279795	46280090	(36977351)	C	HAL1ME	LINE/L1	(427)	2080	1745	1623762
261	31.5	12.6	3.2	chr17	49383764	49384142	(33873299)	+	L2c	LINE/L2	2952	3408	(18)	1629841
1099	24.9	8.5	5.0	chr17	50755635	50756122	(32501319)	+	L1ME3D	LINE/L1	5558	6054	(119)	1632371
401	7.6	1.7	0.0	chr17	55442206	55442269	(27815172)	C	MER66B	LTR/ERV1	(142)	344	295	1639647
1280	25.0	4.3	7.8	chr17	55442442	55442853	(27814588)	C	LTR16A	LTR/ERVL	(50)	401	5	1639648
15	22.2	4.3	0.0	chr17	57256609	57256655	(26000786)	+	GA-rich	Low_complexity	1	49	(0)	1642980
16	18.1	2.1	4.1	chr17	60623315	60623362	(22634079)	+	(TAAT)n	Simple_repeat	1	49	(0)	1649685
3660	16.1	6.0	3.6	chr17	60739641	60740142	(22517299)	C	L1MCa	LINE/L1	(4682)	1826	1324	1649960
13119	19.5	4.1	2.2	chr17	61632798	61634916	(21622525)	C	L1MA4	LINE/L1	(1669)	5890	3697	1651367
4046	20.6	2.3	2.3	chr17	61634926	61636167	(21621274)	C	L1MA4	LINE/L1	(4459)	3106	1864	1651367
1977	14.6	0.0	2.6	chr17	62111386	62111687	(21145754)	C	AluSq2	SINE/Alu	(19)	294	1	1652287
16	5.3	0.0	0.0	chr17	62111773	62111792	(21145649)	+	(A)n	Simple_repeat	1	20	(0)	1652288
419	31.0	8.3	0.5	chr17	63894060	63894247	(19363194)	+	MER102b	DNA/hAT-Charlie	74	277	(64)	1655545
2182	13.6	0.0	0.7	chr17	64649560	64649853	(18607588)	+	AluSz	SINE/Alu	1	292	(20)	1656992
4105	24.7	4.3	2.2	chr17	66022733	66023865	(17233576)	+	L1M2	LINE/L1	1762	2916	(4029)	1659576
15	0.0	0.0	5.0	chr17	66393409	66393428	(16864013)	+	(AC)n	Simple_repeat	1	20	(0)	1660204
29	0.0	0.0	0.0	chr17	66393642	66393666	(16863775)	+	(GT)n	Simple_repeat	1	25	(0)	1660205
1051	26.7	13.6	1.7	chr17	66927183	66927974	(16329467)	+	L1ME4b	LINE/L1	2	888	(4)	1661070
2004	14.5	2.6	0.0	chr17	66927979	66928282	(16329159)	+	AluSz	SINE/Alu	1	312	(0)	1661071
1027	20.8	4.8	0.0	chr17	73228009	73228205	(10029236)	C	MER3	DNA/hAT-Charlie	(0)	209	3	1671893
5357	16.7	5.0	4.5	chr17	74295414	74296160	(8961281)	C	L1M4	LINE/L1	(6220)	1297	560	1673866
746	25.2	0.0	0.0	chr17	74296194	74296324	(8961117)	+	FLAM_C	SINE/Alu	2	132	(11)	1673875
2191	6.5	6.7	0.0	chr17	74747996	74748273	(8509168)	+	AluSx	SINE/Alu	1	298	(14)	1674750
15	17.8	6.7	0.0	chr17	74748450	74748494	(8508947)	+	(CGCCG)n	Simple_repeat	1	48	(0)	1674751
1856	15.7	0.0	3.3	chr17	76373310	76373609	(6883832)	+	AluJo	SINE/Alu	12	301	(11)	1677933
698	7.5	0.0	1.1	chr17	76373613	76373707	(6883734)	+	AluSx	SINE/Alu	210	303	(9)	1677929
2298	9.5	0.3	0.0	chr17	76374031	76374324	(6883117)	C	AluSq	SINE/Alu	(18)	295	1	1677934
1232	22.5	5.1	0.0	chr17	77074506	77074767	(6182674)	+	MER58B	DNA/hAT-Charlie	9	284	(57)	1679380
273	7.7	0.0	2.5	chr17	77074756	77074795	(6182646)	+	MER58D	DNA/hAT-Charlie	348	386	(0)	1679381
247	24.2	0.0	3.1	chr17	77075131	77075194	(6182247)	C	MIRb	SINE/MIR	(189)	79	18	1679382
1821	13.9	3.4	0.3	chr17	77075245	77075532	(6181909)	+	AluJo	SINE/Alu	1	297	(15)	1679383
23	9.7	0.0	0.0	chr17	77388811	77388843	(5868598)	+	(T)n	Simple_repeat	1	33	(0)	1679976
1903	31.4	8.5	4.9	chr17	78558837	78560236	(4697205)	+	L2a	LINE/L2	1974	3426	(0)	1682038
2308	9.9	0.3	1.3	chr17	78890204	78890505	(4366936)	C	AluSx	SINE/Alu	(13)	299	1	1682637
949	28.7	5.0	10.2	chr17	79886544	79887071	(3370370)	C	L2a	LINE/L2	(7)	3419	2921	1684108
2479	8.7	0.0	0.0	chr17	79994412	79994723	(3262718)	C	AluSq10	SINE/Alu	(1)	312	1	1684261
1868	13.5	2.6	1.0	chr17	80830745	80831041	(2426400)	C	AluJb	SINE/Alu	(6)	306	5	1685584
121	22.7	0.4	8.2	chr17	80929972	80930312	(2327129)	+	(CTCAG)n	Simple_repeat	1	313	(0)	1685673
32	10.5	0.0	6.5	chr17	80930313	80930405	(2327036)	+	(CAGCT)n	Simple_repeat	1	93	(0)	1685674
121	22.7	0.4	8.2	chr17	80930406	80930537	(2326904)	+	(CTCAG)n	Simple_repeat	4	127	(0)	1685675
2231	10.8	0.3	1.6	chr17	81497672	81497977	(1759464)	+	AluSz	SINE/Alu	1	302	(10)	1686318
1161	20.9	5.4	0.7	chr17	81497990	81498273	(1759168)	+	L1MB2	LINE/L1	5825	6122	(49)	1686319
623	28.8	12.3	4.3	chr17	82308004	82308257	(949184)	C	L1MEh	LINE/L1	(403)	1832	1587	1687463
2086	11.3	2.0	2.0	chr17	82308258	82308557	(948884)	+	AluSz	SINE/Alu	2	301	(11)	1687464
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1050	24.9	6.4	3.8	chr17	83015464	83015611	(241830)	+	L1ME3B	LINE/L1	5830	5982	(260)	1688480
1768	16.5	3.6	1.5	chr17	83015612	83015938	(241503)	+	MER1B	DNA/hAT-Charlie	4	337	(2)	1688482
1050	24.9	6.4	3.8	chr17	83015939	83016182	(241259)	+	L1ME3B	LINE/L1	5983	6233	(9)	1688480
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
2005	9.5	3.1	7.9	chr18	655683	656029	(79717256)	+	MER4B	LTR/ERV1	1	580	(320)	1690189
2074	10.4	0.0	0.0	chr18	3298491	3298749	(77074536)	C	AluSg	SINE/Alu	(17)	293	35	1694112
16799	16.4	2.1	2.5	chr18	3298750	3300419	(77072866)	+	L1PB3	LINE/L1	2493	4223	(2639)	1694111
19296	14.7	2.2	0.7	chr18	6581929	6587158	(73786127)	+	L1PA16	LINE/L1	5	5333	(1150)	1698756
6674	20.2	3.8	1.3	chr18	7993035	7994265	(72379020)	+	L1MA4	LINE/L1	2605	3876	(3686)	1700850
9611	21.3	6.4	4.4	chr18	9231844	9232847	(71140438)	C	L1MA4A	LINE/L1	(3788)	3774	2732	1702671
686	18.3	2.3	0.2	chr18	11943428	11943571	(68429714)	+	MLT1F1	LTR/ERVL-MaLR	1	144	(411)	1706637
259	16.0	2.0	0.0	chr18	11943585	11943634	(68429651)	+	MLT1F1	LTR/ERVL-MaLR	248	298	(271)	1706637
646	17.2	18.8	2.9	chr18	11943652	11943691	(68429594)	+	MLT1F1	LTR/ERVL-MaLR	339	387	(161)	1706637
4012	15.7	4.1	4.4	chr18	11943692	11944422	(68428863)	C	LTR1F1	LTR/ERV1	(0)	729	1	1706638
4026	19.1	5.2	3.0	chr18	12802497	12804008	(67569277)	+	L1MA6	LINE/L1	2638	4185	(3377)	1708153
3942	18.5	4.8	0.7	chr18	21754246	21754946	(58618339)	+	MER44C	DNA/TcMar-Tigger	1	731	(2)	1713252
386	23.7	1.7	11.3	chr18	21755243	21755334	(58617951)	+	Tigger16b	DNA/TcMar-Tigger	193	285	(51)	1713253
2320	9.3	5.1	0.0	chr18	21755335	21755614	(58617671)	C	AluSg	SINE/Alu	(15)	295	1	1713254
11713	13.9	6.2	1.4	chr18	21873675	21874221	(58499064)	+	L1MA4	LINE/L1	4502	5070	(2492)	1713449
2050	11.5	7.2	1.4	chr18	21874222	21874574	(58498711)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1713450
11713	13.9	6.2	1.4	chr18	21874575	21874757	(58498528)	+	L1MA4	LINE/L1	5071	5255	(2307)	1713449
2017	19.3	7.0	0.2	chr18	21874758	21875183	(58498102)	C	LTR32	LTR/ERVL	(0)	457	1	1713451
30	8.1	0.0	0.0	chr18	22547377	22547415	(57825870)	+	(GT)n	Simple_repeat	1	39	(0)	1714695
7069	21.8	6.7	7.2	chr18	22652254	22653842	(57719443)	C	L1MB7	LINE/L1	(4012)	2388	777	1714836
15715	13.4	4.8	1.9	chr18	22658064	22662517	(57710768)	+	L1PA3	LINE/L1	2989	7561	(0)	1714843
510	25.3	13.5	2.1	chr18	23926884	23927073	(56446212)	C	MIR	SINE/MIR	(17)	245	31	1717073
186	27.4	0.0	16.7	chr18	23927096	23927162	(56446123)	C	MIR	SINE/MIR	(10)	252	190	1717074
2135	13.1	0.7	0.0	chr18	23927163	23927468	(56445817)	C	AluSx1	SINE/Alu	(4)	308	1	1717075
13	4.7	4.5	0.0	chr18	24271698	24271719	(56101566)	+	(CCT)n	Simple_repeat	1	23	(0)	1717613
1153	29.7	8.7	1.8	chr18	24680349	24680862	(55692423)	+	MLT1H1	LTR/ERVL-MaLR	1	553	(2)	1718332
1287	27.7	7.6	4.2	chr18	25503363	25503935	(54869350)	C	MLT2F	LTR/ERVL	(69)	594	1	1719422
45	6.0	0.0	0.0	chr18	25504018	25504069	(54869216)	+	(TC)n	Simple_repeat	1	52	(0)	1719423
2254	9.6	0.0	1.0	chr18	26271642	26271943	(54101342)	+	AluSx1	SINE/Alu	1	299	(13)	1720635
1240	14.7	4.6	1.5	chr18	26271944	26272182	(54101103)	C	MER61B	LTR/ERV1	(73)	354	15	1720636
1212	18.3	6.0	0.0	chr18	26272206	26272424	(54100861)	C	MER1B	DNA/hAT-Charlie	(106)	233	1	1720637
10297	15.4	3.4	1.7	chr18	27708582	27709806	(52663479)	C	L1PA16	LINE/L1	(3237)	3246	2015	1722773
22	12.8	0.0	0.0	chr18	27955747	27955780	(52417505)	+	(T)n	Simple_repeat	1	34	(0)	1723114
18945	16.5	4.3	1.3	chr18	28436235	28441961	(51931324)	C	L1PA16	LINE/L1	(1404)	5445	1	1723714
5028	23.9	5.8	4.2	chr18	29328578	29330422	(51042863)	C	L1M4b	LINE/L1	(4064)	2803	929	1724927
13426	11.2	0.7	1.1	chr18	31289928	31292177	(49081108)	C	L1PA10	LINE/L1	(2001)	4330	2091	1727488
308	34.8	2.2	6.2	chr18	31292215	31292407	(49080878)	C	LTR88b	LTR/Gypsy?	(584)	253	69	1727489
36	0.0	0.0	2.6	chr18	31943294	31943331	(48429954)	+	(GCGGGG)n	Simple_repeat	1	38	(0)	1728480
4710	21.6	4.3	4.8	chr18	33531864	33533843	(46839442)	+	L1PA17	LINE/L1	1453	3393	(3456)	1730859
19012	14.3	2.9	2.0	chr18	37015163	37020107	(43353178)	C	L1PA16	LINE/L1	(1155)	5694	716	1735514
357	25.6	10.7	0.8	chr18	38077202	38077434	(42295851)	+	L2a	LINE/L2	3095	3417	(9)	1736900
256	32.1	4.1	3.5	chr18	38077447	38077591	(42295694)	+	MLT1K	LTR/ERVL-MaLR	448	593	(2)	1736899
202	26.0	17.4	1.0	chr18	38077613	38077713	(42295572)	C	MIR1_Amn	SINE/MIR	(107)	123	3	1736901
2148	12.7	0.0	0.0	chr18	38077759	38078069	(42295216)	C	AluSq2	SINE/Alu	(0)	313	1	1736902
7491	21.9	3.9	2.1	chr18	40302344	40303756	(40069529)	C	L1PA17	LINE/L1	(3296)	3619	2210	1739828
9679	22.0	4.5	3.5	chr18	40973564	40977360	(39395925)	C	L1MA4A	LINE/L1	(3246)	4316	373	1740750
11087	21.1	5.8	4.0	chr18	58653560	58655472	(21717813)	C	L1M2	LINE/L1	(2687)	4172	2103	1767601
1553	31.8	8.9	4.1	chr18	58655567	58655983	(21717302)	+	LTR78	LTR/ERV1	525	941	(363)	1767607
2576	13.3	5.5	0.2	chr18	61982506	61982934	(18390351)	C	MSTB2	LTR/ERVL-MaLR	(4)	453	1	1772751
1186	25.9	9.4	4.1	chr18	61982935	61983055	(18390230)	C	L1MEi	LINE/L1	(860)	1352	1218	1772748
536	23.5	8.0	0.0	chr18	61983114	61983262	(18390023)	C	MER58C	DNA/hAT-Charlie	(2)	213	52	1772752
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
197	27.6	0.0	3.3	chr19	343796	343855	(58273761)	C	MIRc	SINE/MIR	(47)	221	164	1796767
325	29.3	0.0	0.0	chr19	344012	344086	(58273530)	+	MER46C	DNA/TcMar-Tigger	264	338	(0)	1796768
19	21.2	0.0	2.0	chr19	344397	344447	(58273169)	+	G-rich	Low_complexity	1	51	(0)	1796769
35	30.5	2.5	3.1	chr19	1826378	1826536	(56791080)	+	G-rich	Low_complexity	1	163	(0)	1799583
1874	15.0	0.0	4.2	chr19	2582969	2583105	(56034511)	C	AluJo	SINE/Alu	(182)	130	1	1801157
416	29.6	8.5	6.5	chr19	2583106	2583222	(56034394)	+	L1ME4a	LINE/L1	5465	5578	(546)	1801156
2432	8.1	0.0	0.0	chr19	4147074	4147371	(54470245)	+	AluSc8	SINE/Alu	1	298	(13)	1804870
2357	9.0	0.3	0.3	chr19	4147596	4147896	(54469720)	+	AluSq2	SINE/Alu	1	301	(12)	1804871
950	29.1	4.2	4.0	chr19	4186833	4187130	(54430486)	C	L2a	LINE/L2	(18)	3408	3106	1804974
5530	18.0	5.2	1.4	chr19	6170441	6172496	(52445120)	C	L1PA15-16	LINE/L1	(3192)	3723	1608	1809605
10846	18.9	8.1	6.7	chr19	7756060	7756533	(50861083)	C	L1M2	LINE/L1	(3890)	3675	3203	1813655
2569	10.5	0.8	0.8	chr19	7756534	7756908	(50860708)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1813659
592	20.7	7.8	3.8	chr19	8356160	8356353	(50261263)	+	L1MC4	LINE/L1	7390	7569	(473)	1815115
1055	16.1	0.0	0.0	chr19	8356358	8356512	(50261104)	+	AluJb	SINE/Alu	134	288	(24)	1815116
16	20.6	0.0	5.9	chr19	8367671	8367721	(50249895)	+	(CCTC)n	Simple_repeat	1	51	(0)	1815153
26	0.0	0.0	0.0	chr19	8367798	8367822	(50249794)	+	(TCAT)n	Simple_repeat	1	25	(0)	1815154
1294	8.5	0.0	3.4	chr19	8367834	8368010	(50249606)	C	AluSx1	SINE/Alu	(15)	297	127	1815155
251	16.7	0.0	0.0	chr19	9786321	9786362	(48831254)	+	MLT1H	LTR/ERVL-MaLR	508	549	(0)	1818105
18	0.0	0.0	0.0	chr19	15331873	15331895	(43285721)	+	(TCC)n	Simple_repeat	1	23	(0)	1831589
2400	10.6	0.0	0.0	chr19	17037638	17037949	(41579667)	+	AluSx1	SINE/Alu	1	312	(0)	1835357
235	17.3	28.8	0.9	chr19	18323652	18323756	(40293860)	C	L2a	LINE/L2	(15)	3411	3266	1838618
1006	22.9	2.8	9.7	chr19	18323760	18324061	(40293555)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	169	1838619
1047	8.8	0.0	0.0	chr19	18324062	18324198	(40293418)	C	FLAM_C	SINE/Alu	(6)	137	1	1838620
3956	10.5	2.0	0.0	chr19	19996249	19996830	(38620786)	+	L1PB1	LINE/L1	5558	6151	(0)	1841930
182	18.9	10.2	3.6	chr19	19996834	19996888	(38620728)	C	MIR3	SINE/MIR	(41)	167	109	1841931
18	12.2	0.0	0.0	chr19	19996975	19997001	(38620615)	+	(CA)n	Simple_repeat	1	27	(0)	1841932
7281	21.3	4.5	3.5	chr19	28633449	28635422	(29982194)	+	L1PA15-16	LINE/L1	1721	3487	(3827)	1849072
3976	26.3	3.2	1.8	chr19	28781244	28783951	(29833665)	C	L1PA15-16	LINE/L1	(3418)	3497	762	1849220
17941	7.8	2.4	1.5	chr19	29552350	29557417	(29060199)	+	L1PA10	LINE/L1	79	5202	(1129)	1850404
11525	20.0	5.9	3.4	chr19	29998053	29999703	(28617913)	C	L1MB2	LINE/L1	(3219)	3425	1640	1851281
1854	20.8	17.1	0.5	chr19	32755048	32755699	(25861917)	C	L1ME1	LINE/L1	(280)	5899	5107	1855439
14380	17.1	6.4	4.2	chr19	33851149	33852039	(24765577)	+	L1M2	LINE/L1	1992	2871	(3978)	1857417
3758	20.6	9.2	3.8	chr19	34749433	34750580	(23867036)	+	L1M4c	LINE/L1	551	1766	(4618)	1859075
3938	19.3	5.6	1.0	chr19	34750581	34751348	(23866268)	+	HERVL74-int	LTR/ERVL	1224	2028	(3657)	1859076
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
26	23.7	3.8	3.6	chr19	36272210	36272218	(22345398)	+	(CTGTCT)n	Simple_repeat	67	110	(0)	1862255
4129	16.8	3.0	0.1	chr19	40044108	40045323	(18572293)	+	L1M2	LINE/L1	2786	4035	(3527)	1870156
22	3.8	0.0	0.0	chr19	41261986	41262012	(17355604)	+	(CA)n	Simple_repeat	1	27	(0)	1873025
2006	21.3	4.6	1.5	chr19	41592931	41593808	(17023808)	C	L1PBa	LINE/L1	(3604)	3961	2995	1873623
1492	15.6	0.0	1.3	chr19	41593809	41594045	(17023571)	+	AluJb	SINE/Alu	58	291	(21)	1873624
4739	19.4	8.5	7.7	chr19	44255301	44256661	(14360955)	+	L1M4	LINE/L1	1058	2459	(5161)	1878450
497	24.7	7.2	3.1	chr19	44304576	44304734	(14312882)	C	MIR	SINE/MIR	(36)	226	61	1878535
1654	23.2	9.7	7.3	chr19	44493548	44494081	(14123535)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	1878820
15	24.5	2.0	2.0	chr19	47875202	47875251	(10742365)	+	GA-rich	Low_complexity	1	51	(0)	1887296
12	8.6	0.0	6.9	chr19	47875296	47875324	(10742292)	+	GA-rich	Low_complexity	1	29	(0)	1887296
2038	14.8	0.0	0.0	chr19	47875356	47875638	(10741978)	+	AluJb	SINE/Alu	1	283	(29)	1887297
32	2.9	0.0	0.0	chr19	47875639	47875673	(10741943)	+	(AAAAC)n	Simple_repeat	1	35	(0)	1887298
780	8.7	0.7	0.0	chr19	48834341	48835779	(9781837)	C	MSR1	Satellite	(26)	1448	1	1889737
4267	15.9	0.8	4.1	chr19	50135484	50135964	(8481652)	C	L1P4	LINE/L1	(2469)	3677	3219	1892740
1885	14.3	2.4	0.9	chr19	50135965	50136288	(8481328)	+	L1PB1	LINE/L1	5822	6150	(1)	1892741
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
1843	11.9	5.0	1.1	chr19	51927851	51928009	(6689607)	C	AluJr	SINE/Alu	(13)	299	143	1896500
2381	9.1	1.0	0.3	chr19	53851365	53851673	(4765943)	+	AluSx1	SINE/Alu	1	311	(1)	1900425
488	30.0	13.8	5.7	chr19	53851674	53851957	(4765659)	C	L1M5	LINE/L1	(1059)	5087	4763	1900424
353	34.2	8.3	1.3	chr19	53851959	53852192	(4765424)	+	L2a	LINE/L2	2942	3193	(233)	1900426
840	23.5	2.6	0.5	chr19	54590782	54590969	(4026647)	+	LTR42	LTR/ERVL	3	194	(301)	1902023
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
6821	12.9	2.5	0.5	chr19	56331889	56333626	(2283990)	C	L1PA16	LINE/L1	(3209)	3640	1864	1905637
1491	27.2	6.8	3.8	chr2	8559057	8559465	(233634064)	+	L1MA9	LINE/L1	1718	2140	(5377)	1921563
19121	13.2	2.8	1.3	chr2	8951505	8955619	(233237910)	C	L1PA16	LINE/L1	(2574)	4275	10	1922086
18392	15.4	1.9	1.3	chr2	11035232	11039052	(231154477)	C	L1PB3	LINE/L1	(576)	6308	2366	1925910
569	20.4	5.0	0.0	chr2	11039060	11039191	(231154338)	+	L1MB8	LINE/L1	6028	6166	(12)	1925913
255	28.4	10.1	2.5	chr2	11112348	11112466	(231081063)	C	Charlie4z	DNA/hAT-Charlie	(18)	149	21	1926041
370	36.1	4.8	0.0	chr2	11112505	11112684	(231080845)	+	L3	LINE/CR1	3670	3858	(241)	1926042
30	0.0	5.7	0.0	chr2	18414083	18414117	(223779412)	+	(TCTT)n	Simple_repeat	1	37	(0)	1937420
6867	20.6	8.2	7.1	chr2	18672728	18675103	(223518426)	C	L1PB3	LINE/L1	(2272)	4587	1977	1937790
2740	4.6	0.0	0.0	chr2	23724762	23725066	(218468463)	+	AluY	SINE/Alu	1	305	(6)	1944733
4141	22.2	7.0	1.6	chr2	23725067	23725810	(218467719)	+	L1MEf	LINE/L1	1760	2569	(4071)	1944726
13239	13.0	2.6	0.7	chr2	24611588	24613886	(217579643)	C	L1PA15-16	LINE/L1	(3658)	3191	844	1946443
1109	20.8	3.2	3.2	chr2	26942206	26942453	(215251076)	C	MLT1B	LTR/ERVL-MaLR	(142)	248	1	1950926
9786	18.6	2.3	1.9	chr2	27693232	27693705	(214499824)	C	L1PBa	LINE/L1	(3935)	2927	2426	1952273
3278	15.3	4.0	1.1	chr2	29108065	29108598	(213084931)	C	MER44B	DNA/TcMar-Tigger	(0)	550	1	1954812
2084	10.1	5.2	1.7	chr2	32364243	32364540	(209828989)	C	AluSx3	SINE/Alu	(2)	309	1	1960167
16	5.3	0.0	0.0	chr2	32364759	32364778	(209828751)	+	(T)n	Simple_repeat	1	20	(0)	1960168
4206	15.4	3.0	2.2	chr2	38700252	38701030	(203492499)	C	L1M2	LINE/L1	(3518)	4044	3253	1969764
2455	10.0	0.0	0.0	chr2	38870598	38870908	(203322621)	+	AluSc8	SINE/Alu	1	311	(0)	1970152
5240	19.9	18.8	3.9	chr2	38870909	38871493	(203322036)	+	L1M4b	LINE/L1	2187	2854	(4013)	1970151
194	32.8	9.4	0.8	chr2	39075281	39075397	(203118132)	C	L2	LINE/L2	(876)	2543	2416	1970487
13	9.3	0.0	0.0	chr2	39075466	39075488	(203118041)	+	(AAAG)n	Simple_repeat	1	23	(0)	1970488
270	26.7	2.6	5.1	chr2	39075506	39075584	(203117945)	C	SVA_E	Retroposon/SVA	(1175)	207	131	1970489
612	24.6	0.0	0.0	chr2	39075528	39075641	(203117888)	+	FLAM_A	SINE/Alu	6	119	(23)	1970490
584	22.7	9.9	2.5	chr2	39075661	39075976	(203117553)	+	L1ME3D	LINE/L1	3174	3515	(2631)	1970491
5180	22.1	5.3	7.4	chr2	39599301	39599687	(202593842)	+	Arthur1	DNA/hAT-Tip100	1068	1418	(2529)	1971475
1537	22.4	9.4	2.4	chr2	39599706	39600245	(202593284)	+	Arthur1	DNA/hAT-Tip100	3366	3947	(0)	1971477
9609	19.0	3.1	1.0	chr2	39834442	39837127	(202356402)	C	L1PA15-16	LINE/L1	(1779)	5070	2324	1971798
973	26.0	5.3	1.7	chr2	42795808	42796128	(199397401)	+	MLT1H	LTR/ERVL-MaLR	1	344	(235)	1976328
423	27.5	0.0	0.2	chr2	42796229	42796355	(199397174)	+	MER113A	DNA/hAT-Charlie	201	313	(1)	1976329
201	34.4	4.0	4.0	chr2	42796388	42796487	(199397042)	+	L2b	LINE/L2	3257	3356	(19)	1976330
3963	24.3	6.9	4.6	chr2	44463772	44465315	(197728214)	+	L1MA5A	LINE/L1	799	2256	(4128)	1979261
4327	21.4	6.8	2.4	chr2	48006629	48007728	(194185801)	C	HAL1M8	LINE/L1	(458)	2533	1381	1985229
7645	11.1	3.2	7.9	chr2	53717492	53718688	(188474841)	+	L1PA16	LINE/L1	1640	2851	(3998)	1993015
256	12.2	0.0	0.0	chr2	53718689	53718729	(188474800)	+	U5	snRNA	12	52	(64)	1993016
1474	14.2	5.6	5.6	chr2	54715743	54716048	(187477481)	C	L1MB8	LINE/L1	(1)	6177	5872	1994725
1528	10.4	0.0	0.0	chr2	54716051	54716270	(187477259)	C	AluSx1	SINE/Alu	(0)	312	91	1994726
1468	15.8	4.0	4.6	chr2	59841544	59841867	(182351662)	C	MER33	DNA/hAT-Charlie	(0)	324	3	2001648
12329	19.8	4.2	0.5	chr2	63103189	63107084	(179086445)	C	L1MA4A	LINE/L1	(2686)	4876	727	2007442
15069	18.6	2.9	1.2	chr2	63454516	63455413	(178738116)	+	L1MA4A	LINE/L1	2763	3678	(3968)	2007890
2356	33.1	10.3	1.4	chr2	64861059	64862355	(177331174)	+	L2a	LINE/L2	671	2096	(1323)	2010077
16	5.3	0.0	0.0	chr2	66070944	66070963	(176122566)	+	(T)n	Simple_repeat	1	20	(0)	2012321
14892	23.6	5.5	1.9	chr2	67540873	67543047	(174650482)	C	L1PB3	LINE/L1	(3941)	2922	661	2014231
12752	13.6	4.2	1.3	chr2	67582666	67583688	(174609841)	+	L1PA15-16	LINE/L1	1874	2920	(3929)	2014288
2634	17.4	4.7	4.6	chr2	68359472	68360379	(173833150)	C	L1MC3	LINE/L1	(177)	7608	6636	2015499
190	27.0	7.9	6.9	chr2	69139144	69139318	(173054211)	+	L2c	LINE/L2	3020	3196	(191)	2016576
225	33.3	5.6	1.5	chr2	69741254	69741390	(172452139)	C	L2c	LINE/L2	(4)	3383	3241	2017655
343	23.7	0.0	5.8	chr2	69895366	69895468	(172298061)	+	MIRb	SINE/MIR	136	232	(36)	2017958
488	30.0	12.9	1.9	chr2	70103171	70103438	(172090091)	C	L1M5	LINE/L1	(549)	5575	5274	2018384
1099	7.0	3.4	0.0	chr2	70103454	70103596	(172089933)	C	AluSx1	SINE/Alu	(39)	273	126	2018385
378	27.4	3.1	1.6	chr2	70647615	70647740	(171545789)	C	MIR	SINE/MIR	(127)	135	8	2019410
231	20.4	0.0	3.9	chr2	70648160	70648210	(171545319)	C	L1MD	LINE/L1	(3425)	2721	2673	2019411
4017	17.8	4.8	0.5	chr2	72665263	72666476	(169527053)	+	L1PA16	LINE/L1	1884	3161	(3322)	2022352
13462	17.3	3.1	2.7	chr2	75240774	75243077	(166950452)	+	L1P4a	LINE/L1	5	2310	(4193)	2026682
2222	8.3	1.0	3.6	chr2	75243078	75243378	(166950151)	+	AluSc8	SINE/Alu	1	293	(18)	2026683
1110	14.9	1.1	0.6	chr2	75646162	75646336	(166547193)	+	AluJr	SINE/Alu	119	294	(18)	2027297
14625	22.8	3.2	1.4	chr2	83416987	83421919	(158771610)	+	L1PB4	LINE/L1	1096	5876	(973)	2037643
8018	11.9	3.2	0.6	chr2	84362080	84364658	(157828871)	+	L1PB2	LINE/L1	3279	8144	(2)	2038881
17	12.3	2.7	2.6	chr2	85354466	85354502	(156839027)	+	(CAG)n	Simple_repeat	1	38	(0)	2040586
8141	22.4	6.0	3.5	chr2	88147109	88149838	(154043691)	+	L1MA5	LINE/L1	588	3804	(3758)	2045377
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
6764	2.6	0.0	0.2	chr2	95823541	95824353	(146369176)	+	L1PA2	LINE/L1	2852	3662	(2484)	2051257
6342	18.5	2.8	6.1	chr2	95824350	95826979	(146366550)	C	L1PA10	LINE/L1	(4162)	3457	1128	2051255
616	15.3	8.3	0.0	chr2	97664455	97664565	(144528964)	C	FLAM_A	SINE/Alu	(10)	132	12	2053940
8600	19.2	7.3	2.1	chr2	99229739	99230675	(142962854)	+	L1PA15-16	LINE/L1	2163	3475	(3374)	2056107
703	33.6	8.9	5.7	chr2	100177911	100178128	(142015401)	+	ERVL-B4-int	LTR/ERVL	1712	1932	(3735)	2057505
2811	15.0	9.1	0.6	chr2	100178129	100178619	(142014910)	+	MER66C	LTR/ERV1	1	537	(18)	2057508
1596	20.9	3.9	5.9	chr2	102216287	102217290	(139976239)	C	L1M1	LINE/L1	(3735)	3827	2834	2060793
28958	11.2	4.5	3.6	chr2	108437451	108441245	(133752284)	C	LOR1-int	LTR/ERV1	(2056)	6064	1993	2069239
720	13.8	2.9	4.3	chr2	108786254	108786391	(133407138)	C	FLAM_A	SINE/Alu	(6)	136	1	2069806
3521	16.3	0.6	2.5	chr2	109083145	109083779	(133109750)	C	L1MB3	LINE/L1	(33)	6150	5528	2070248
285	32.4	4.0	6.5	chr2	109275800	109275954	(132917575)	+	LFSINE_Vert	SINE/tRNA	3	153	(306)	2070529
1348	19.6	2.7	2.0	chr2	113583264	113583560	(128609969)	C	L1MB3	LINE/L1	(2)	6181	5883	2077015
13	15.4	2.5	4.9	chr2	113583676	113583715	(128609814)	+	G-rich	Low_complexity	1	41	(0)	2077016
8098	18.9	10.1	10.9	chr2	118932105	118932858	(123260671)	C	L1M4c	LINE/L1	(4137)	2231	1532	2084463
777	18.7	0.8	0.0	chr2	118932859	118932981	(123260548)	C	FLAM_A	SINE/Alu	(18)	124	1	2084466
8098	18.9	10.1	10.9	chr2	118932982	118934420	(123259109)	C	L1M4c	LINE/L1	(4853)	1531	29	2084463
3662	7.7	0.2	0.2	chr2	119568346	119568826	(122624703)	C	L1PA10	LINE/L1	(20)	6148	5662	2085592
6909	13.0	4.3	1.9	chr2	119568800	119569126	(122624403)	C	L1MCa	LINE/L1	(4724)	1784	1456	2085593
925	22.1	2.4	6.5	chr2	124804490	124804808	(117388721)	+	MLT1A	LTR/ERVL-MaLR	60	384	(6)	2093744
27837	11.6	5.4	3.6	chr2	133874734	133878689	(108314840)	C	HUERS-P1-int	LTR/ERV1	(2228)	4035	2	2106588
1357	22.1	5.3	7.3	chr2	135139869	135140400	(107053129)	C	L1ME3	LINE/L1	(179)	5994	5500	2108525
2966	19.4	3.1	2.2	chr2	135140409	135140956	(107052573)	C	MER68	LTR/ERVL	(10)	553	1	2108528
7071	19.5	11.1	2.1	chr2	135140957	135141225	(107052304)	C	L1ME3	LINE/L1	(677)	5496	5202	2108525
7508	21.3	2.6	1.9	chr2	136477230	136481236	(105712293)	C	L1M2a1	LINE/L1	(2469)	4643	1	2110758
20550	13.6	1.9	3.7	chr2	138790037	138795487	(103398042)	C	L1PA11	LINE/L1	(1130)	6451	11	2113960
11671	18.6	2.6	1.6	chr2	139641504	139646608	(102546921)	C	L1PA15-16	LINE/L1	(2349)	4500	13	2115073
21656	11.3	2.4	0.7	chr2	146298061	146304155	(95889374)	+	L1PB1	LINE/L1	255	6507	(360)	2123758
12	30.3	0.0	2.0	chr2	147845236	147845285	(94348244)	+	(GCT)n	Simple_repeat	1	50	(0)	2125798
15	13.9	0.0	0.0	chr2	147845343	147845366	(94348163)	+	(C)n	Simple_repeat	1	24	(0)	2125799
15145	17.0	4.0	1.9	chr2	150381265	150385680	(91807849)	C	L1PB3	LINE/L1	(1)	6922	2323	2129290
252	27.9	18.4	3.9	chr2	151980199	151980429	(90213100)	+	L2c	LINE/L2	2800	3071	(348)	2131651
214	31.4	7.5	6.8	chr2	151980455	151980587	(90212942)	+	L2c	LINE/L2	3235	3368	(19)	2131651
12	22.8	1.7	6.8	chr2	153478574	153478631	(88714898)	+	G-rich	Low_complexity	1	59	(0)	2133770
14	16.9	3.0	0.0	chr2	153478867	153478899	(88714630)	+	(GGC)n	Simple_repeat	1	34	(0)	2133771
2187	29.3	3.7	1.4	chr2	154184878	154185769	(88007760)	C	L1M4c	LINE/L1	(4512)	2657	1756	2134618
3955	17.8	2.4	1.9	chr2	157757128	157758248	(84435281)	+	L1M2	LINE/L1	2691	3820	(3742)	2139146
2911	1.9	0.0	0.0	chr2	159062686	159062999	(83130530)	+	AluYb8	SINE/Alu	1	314	(4)	2141057
640	30.0	8.4	6.2	chr2	159063000	159063256	(83130273)	C	MamRep605	LTR?	(216)	633	370	2141056
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
3516	23.6	3.6	1.3	chr2	164326063	164327508	(77866021)	C	L1PA15-16	LINE/L1	(3463)	3383	1900	2148156
429	31.3	7.0	8.2	chr2	169153851	169154167	(73039362)	C	L2c	LINE/L2	(1)	3386	3074	2154568
409	18.9	14.7	0.8	chr2	169830282	169830404	(72363125)	C	L1MC5a	LINE/L1	(2443)	334	192	2155689
393	22.1	10.2	4.1	chr2	169830410	169830603	(72362926)	C	MIR	SINE/MIR	(46)	216	12	2155690
382	29.3	10.2	2.4	chr2	180540829	180541224	(61652305)	+	LTR33C	LTR/ERVL	32	625	(4)	2171584
1714	17.6	1.5	0.8	chr2	184986722	184987152	(57206377)	+	L1M2	LINE/L1	2729	3061	(3082)	2177195
2160	17.3	5.5	0.0	chr2	184987154	184987546	(57205983)	+	MSTC	LTR/ERVL-MaLR	1	416	(12)	2177196
8921	20.4	2.5	1.5	chr2	189980744	189983771	(52209758)	C	L1PA17	LINE/L1	(3219)	3696	848	2183668
7003	20.8	3.9	2.7	chr2	194984389	194987928	(47205601)	+	L1MA4	LINE/L1	1626	7468	(0)	2190334
12	19.8	4.7	2.2	chr2	201807808	201807850	(40385679)	+	(CTTTCCC)n	Simple_repeat	1	45	(0)	2200620
13756	20.4	3.7	5.2	chr2	202583747	202584422	(39609107)	C	L1PA15-16	LINE/L1	(3935)	2914	2242	2202297
20	17.6	2.2	0.0	chr2	207163398	207163442	(35030087)	+	GA-rich	Low_complexity	1	46	(0)	2209616
5275	23.6	4.7	2.4	chr2	211503940	211505570	(30687959)	+	L1PA15-16	LINE/L1	1462	2867	(4052)	2215700
13378	20.3	5.3	1.4	chr2	213430582	213433909	(28759620)	+	L1PB4	LINE/L1	2819	6276	(1286)	2218215
316	29.6	5.3	1.6	chr2	215266224	215266350	(26927179)	+	MIRc	SINE/MIR	109	240	(28)	2220788
1745	28.1	9.7	5.0	chr2	215266653	215266951	(26926578)	+	L2	LINE/L2	2107	2452	(967)	2220789
558	29.3	7.4	0.9	chr2	216589766	216589992	(25603537)	+	MIRc	SINE/MIR	20	262	(6)	2223049
301	26.3	8.8	2.6	chr2	216809750	216809866	(25383663)	C	MIRb	SINE/MIR	(31)	237	113	2223468
976	13.2	0.0	6.9	chr2	217963762	217963920	(24229609)	+	AluJb	SINE/Alu	1	148	(164)	2225245
506	31.2	3.3	1.3	chr2	217964200	217964428	(24229101)	C	MIR	SINE/MIR	(2)	266	3	2225246
2310	8.5	0.0	2.0	chr2	219298422	219298726	(22894803)	+	AluSq	SINE/Alu	1	299	(14)	2227667
7209	25.3	5.3	8.1	chr2	219809495	219811596	(22381933)	C	L1MA8	LINE/L1	(3146)	4419	2351	2228537
2455	24.2	8.2	2.5	chr2	222937354	222939329	(19254200)	C	L1MB2	LINE/L1	(3538)	3100	1070	2233470
20	0.0	0.0	0.0	chr2	229260818	229260839	(12932690)	+	(T)n	Simple_repeat	1	22	(0)	2243276
1867	19.9	14.1	2.2	chr2	229260905	229261314	(12932215)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	2243277
838	27.4	9.9	8.8	chr2	229627886	229628453	(12565076)	+	MLT1G1	LTR/ERVL-MaLR	5	579	(0)	2243835
2549	7.9	0.0	0.0	chr2	232045671	232045974	(10147555)	C	AluSx1	SINE/Alu	(8)	304	1	2248102
1840	13.8	13.6	2.5	chr2	232045975	232046039	(10147490)	C	MLT1A1	LTR/ERVL-MaLR	(327)	81	4	2248101
623	14.7	19.9	0.0	chr2	232046307	232046435	(10147094)	+	MER5A1	DNA/hAT-Charlie	3	163	(3)	2248103
8758	18.6	3.9	3.5	chr2	233502617	233506005	(8687524)	+	L1MA6	LINE/L1	2064	5242	(2320)	2250595
205	29.4	2.3	0.0	chr2	237625898	237625982	(4567547)	+	L2b	LINE/L2	3260	3346	(29)	2256615
410	17.9	1.6	0.0	chr2	239663835	239663918	(2529611)	C	LTR16E1	LTR/ERVL	(0)	568	467	2259185
8205	19.5	7.9	1.2	chr20	116182	118082	(64326085)	+	L1PA15-16	LINE/L1	1161	2962	(3891)	2262263
955	27.1	12.9	4.4	chr20	302693	303151	(64141016)	C	LTR67B	LTR/ERVL	(116)	504	1	2262597
947	33.5	6.2	2.9	chr20	303196	303754	(64140413)	C	L2b	LINE/L2	(513)	2906	2328	2262596
646	20.6	7.4	3.6	chr20	303756	303977	(64140190)	C	MER112	DNA/hAT-Charlie	(2)	259	29	2262598
1461	26.9	5.2	1.9	chr20	1502170	1502820	(62941347)	C	L1M3c	LINE/L1	(4169)	2565	1824	2265118
788	16.5	0.0	0.0	chr20	1502822	1502936	(62941231)	C	AluJr	SINE/Alu	(20)	292	178	2265121
1267	27.4	12.3	3.3	chr20	5734584	5735040	(58709127)	+	MLT1J	LTR/ERVL-MaLR	1	504	(8)	2273165
10545	11.8	0.7	1.3	chr20	8102576	8105600	(56338567)	C	L1PA15-16	LINE/L1	(816)	6052	1506	2276765
40	9.8	1.5	0.0	chr20	8131310	8131374	(56312793)	+	(TC)n	Simple_repeat	1	66	(0)	2276797
416	14.1	0.0	0.0	chr20	8131393	8131463	(56312704)	C	L1M5	LINE/L1	(634)	5528	5458	2276798
17	13.4	2.9	0.0	chr20	8131464	8131497	(56312670)	+	(CCTC)n	Simple_repeat	1	35	(0)	2276799
22	23.8	3.7	2.9	chr20	8132151	8132248	(56311919)	+	G-rich	Low_complexity	1	98	(0)	2276800
29	30.4	4.0	0.0	chr20	10218455	10218553	(54225614)	+	(AT)n	Simple_repeat	1	103	(0)	2280185
31	23.5	0.0	0.0	chr20	10218509	10218572	(54225595)	+	(AC)n	Simple_repeat	1	64	(0)	2280186
19	21.2	6.2	0.0	chr20	10218724	10218788	(54225379)	+	(CGCCCC)n	Simple_repeat	1	69	(0)	2280187
2396	10.5	0.7	0.0	chr20	13891387	13891691	(50552476)	+	AluSc	SINE/Alu	1	307	(2)	2285593
3360	25.3	4.0	3.6	chr20	13891692	13892178	(50551989)	+	L1M4c	LINE/L1	1863	2354	(5163)	2285592
575	15.2	16.4	0.6	chr20	16742021	16742199	(47701968)	C	Kanga1d	DNA/TcMar-Tc2	(108)	501	289	2289866
501	23.1	4.9	2.2	chr20	16742165	16742374	(47701793)	C	MER5C1	DNA/hAT-Charlie	(42)	271	5	2289867
190	25.2	24.1	3.9	chr20	16742383	16742510	(47701657)	C	L2	LINE/L2	(417)	3002	2841	2289868
15	4.7	9.8	7.1	chr20	21826396	21826449	(42617718)	+	(CTGG)n	Simple_repeat	1	55	(0)	2297659
497	22.1	10.3	0.0	chr20	23235581	23235711	(41208456)	+	MamGypLTR3	LTR/Gypsy	593	738	(156)	2299412
2063	12.0	3.3	0.0	chr20	25194922	25195212	(39248955)	+	AluSx	SINE/Alu	1	301	(11)	2301830
17	12.7	0.0	0.0	chr20	25195297	25195322	(39248845)	+	(A)n	Simple_repeat	1	26	(0)	2301831
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1918	10.3	0.3	6.7	chr20	34281676	34281987	(30162180)	C	AluSx	SINE/Alu	(19)	293	2	2312678
8994	16.8	7.0	5.7	chr20	35405849	35406989	(29037178)	+	L1MB3	LINE/L1	1259	2418	(5099)	2315183
1263	14.5	14.8	5.5	chr20	37693423	37693714	(26750453)	C	MER33	DNA/hAT-Charlie	(0)	324	1	2320608
270	23.8	1.2	4.5	chr20	37693715	37693753	(26750414)	+	MIRc	SINE/MIR	114	152	(116)	2320607
5635	21.8	9.3	1.5	chr20	45233450	45236794	(19207373)	C	L1M2c	LINE/L1	(3024)	4538	784	2335207
331	28.6	1.6	2.3	chr20	47950908	47951036	(16493131)	C	MER74A	LTR/ERVL	(14)	544	417	2341175
1398	17.2	13.3	1.1	chr20	47951477	47951853	(16492314)	C	MER74A	LTR/ERVL	(127)	431	2	2341175
596	20.4	14.3	0.6	chr20	50107173	50107335	(14336832)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2346098
221	25.7	15.5	3.5	chr20	52452613	52452725	(11991442)	+	L2c	LINE/L2	3294	3422	(4)	2351540
333	27.2	11.7	0.7	chr20	52452751	52452887	(11991280)	C	LTR16A	LTR/ERVL	(297)	154	1	2351546
498	29.2	9.6	4.5	chr20	52452896	52453016	(11991151)	+	MIR	SINE/MIR	1	115	(147)	2351547
2199	9.3	7.1	7.3	chr20	52453017	52453398	(11990769)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2351548
228	22.9	22.2	0.9	chr20	52490633	52490738	(11953429)	+	L2b	LINE/L2	3263	3426	(0)	2351632
6088	5.1	0.3	2.6	chr20	52491242	52491967	(11952200)	+	L1PA7	LINE/L1	5429	6138	(16)	2351633
384	33.4	6.5	2.3	chr20	52516902	52517253	(11926914)	+	L4_C_Mam	LINE/RTE-X	4576	4943	(195)	2351671
853	36.3	1.5	0.8	chr20	52517411	52517807	(11926360)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	12	2351675
1625	21.9	9.2	3.0	chr20	53733932	53734185	(10709982)	+	MLT1C	LTR/ERVL-MaLR	196	467	(0)	2354213
243	32.6	8.8	7.8	chr20	53734186	53734570	(10709597)	C	L2a	LINE/L2	(517)	2902	2510	2354210
16	17.7	0.0	2.5	chr20	61916171	61916210	(2527957)	+	G-rich	Low_complexity	1	40	(0)	2367896
481	31.8	2.9	3.4	chr20	61916292	61916496	(2527671)	+	MIRb	SINE/MIR	54	257	(11)	2367897
22	22.6	0.0	0.0	chr20	61916507	61916558	(2527609)	+	(TCA)n	Simple_repeat	1	52	(0)	2367898
204	6.8	1.1	0.4	chr20	63049064	63049330	(1394837)	+	(CTC)n	Simple_repeat	1	270	(0)	2369225
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
797	22.4	0.5	0.1	chr21	8229975	8230765	(38479218)	+	(TCTC)n	Simple_repeat	2	795	(0)	2373327
446	20.9	0.1	6.5	chr21	8230776	8230919	(38479064)	+	MER39B	LTR/ERV1	298	454	(253)	2373328
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
1263	30.4	12.1	1.4	chr21	9257066	9257711	(37452272)	C	L2	LINE/L2	(1779)	1640	916	2374355
1683	29.2	6.3	6.8	chr21	9810881	9812152	(36897831)	C	SST1	Satellite/centr	(14)	1549	284	2374881
19	33.9	0.0	1.2	chr21	9812172	9812228	(36897755)	+	(GACA)n	Simple_repeat	1	86	(0)	2374882
18	10.4	0.0	0.0	chr21	9812229	9812259	(36897724)	+	(ACACAC)n	Simple_repeat	1	31	(0)	2374883
1892	29.2	5.1	6.4	chr21	9812264	9813560	(36896423)	C	SST1	Satellite/centr	(1)	1562	284	2374884
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
707	31.0	7.0	7.8	chr21	16326063	16326604	(30383379)	C	L2a	LINE/L2	(0)	3426	2835	2380290
2240	10.9	0.3	0.0	chr21	16326664	16326956	(30383027)	+	AluSc	SINE/Alu	1	294	(15)	2380291
203	22.7	20.0	3.3	chr21	26051647	26051737	(20658246)	C	L3	LINE/CR1	(3183)	916	807	2393426
11964	18.5	5.6	1.1	chr21	33330569	33333614	(13376369)	+	L1M2a	LINE/L1	399	3616	(3950)	2404738
1414	15.2	12.7	3.4	chr21	36968028	36968291	(9741692)	C	AluJr	SINE/Alu	(20)	292	1	2410754
517	23.9	11.3	1.6	chr21	36968414	36968604	(9741379)	+	L1MEi	LINE/L1	64	275	(1937)	2410755
432	23.5	3.8	0.0	chr21	36968741	36968842	(9741141)	C	LTR107_Mam	LTR	(238)	332	227	2410756
15821	17.0	4.6	0.8	chr21	39123106	39124235	(7585748)	+	L1M2	LINE/L1	2072	3245	(3600)	2414037
1968	27.8	8.3	3.2	chr21	39353428	39353950	(7356033)	+	L1M1	LINE/L1	2730	3270	(4295)	2414420
4395	7.2	0.3	0.3	chr21	42932808	42933394	(3776589)	+	Harlequin-int	LTR/ERV1	263	849	(6047)	2419593
2305	4.5	0.3	2.8	chr21	42933380	42933699	(3776284)	+	Harlequin-int	LTR/ERV1	1036	1347	(5549)	2419593
12	12.5	0.0	3.6	chr21	43911554	43911581	(2798402)	+	(CTGT)n	Simple_repeat	1	28	(0)	2421030
228	21.9	0.0	0.0	chr21	44364915	44364955	(2345028)	+	MER5A	DNA/hAT-Charlie	70	110	(79)	2421658
295	22.1	0.0	2.9	chr21	44496488	44496557	(2213426)	C	UCON47	Unknown	(4)	161	94	2421826
9642	16.2	1.5	1.6	chr21	44673052	44673411	(2036572)	+	L1MA4A	LINE/L1	2253	2611	(4238)	2422015
6017	21.1	2.1	8.6	chr21	44673391	44674001	(2035982)	+	L1MA4A	LINE/L1	3120	3736	(3106)	2422015
844	16.3	7.8	2.6	chr21	45460987	45461213	(1248770)	C	L1MA9	LINE/L1	(53)	6238	5996	2422869
547	14.9	1.8	0.0	chr21	45461249	45461355	(1248628)	+	L1M4c	LINE/L1	1665	1773	(4611)	2422870
760	12.6	5.5	0.3	chr21	45461637	45461789	(1248194)	C	L1MA9	LINE/L1	(171)	6003	5847	2422871
8556	16.5	4.8	0.8	chr21	45461788	45463568	(1246415)	C	L1M4c	LINE/L1	(4509)	1875	20	2422872
684	25.1	16.3	1.2	chr21	45811195	45811543	(898440)	C	MLT1E2	LTR/ERVL-MaLR	(30)	475	74	2423220
1553	27.4	13.5	10.1	chr21	45811552	45812183	(897800)	C	L1M4a1	LINE/L1	(3690)	2629	1908	2423216
27	24.4	2.2	2.2	chr21	46229094	46229183	(480800)	+	(GGTG)n	Simple_repeat	1	92	(0)	2423636
13	15.5	5.6	0.0	chr21	46229404	46229439	(480544)	+	G-rich	Low_complexity	1	38	(0)	2423637
1013	14.9	13.9	5.1	chr21	46253401	46253655	(456328)	+	MSTA	LTR/ERVL-MaLR	1	281	(147)	2423674
253	16.5	14.1	2.5	chr21	46253682	46253762	(456221)	+	MSTA	LTR/ERVL-MaLR	129	220	(208)	2423675
288	15.4	13.0	2.6	chr21	46253743	46253819	(456164)	+	MSTA	LTR/ERVL-MaLR	114	215	(213)	2423675
281	16.3	7.1	0.9	chr21	46253862	46253939	(456044)	+	THE1D	LTR/ERVL-MaLR	114	192	(183)	2423676
1367	11.4	15.4	0.8	chr21	46253918	46254182	(455801)	+	MSTA	LTR/ERVL-MaLR	118	428	(0)	2423677
6038	19.8	6.0	11.2	chr22	11064568	11067436	(39751032)	+	REP522	Satellite/telo	1	2719	(1252)	2424865
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1249	21.0	6.5	1.2	chr22	11896731	11897053	(38921415)	C	L1MB8	LINE/L1	(5)	6173	5833	2425507
2301	14.0	7.0	0.5	chr22	11897054	11897465	(38921003)	C	MER61C	LTR/ERV1	(0)	428	4	2425508
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
429	26.5	10.7	4.3	chr22	17170887	17171143	(33647325)	+	L1ME4b	LINE/L1	637	908	(1869)	2428365
665	13.6	6.1	0.8	chr22	17171204	17171328	(33647140)	C	AluJo	SINE/Alu	(179)	133	2	2428366
25015	7.1	0.3	0.3	chr22	17296835	17299769	(33518699)	C	L1PA6	LINE/L1	(3213)	3106	179	2428669
491	30.1	3.5	1.2	chr22	17931869	17932033	(32886435)	C	L2a	LINE/L2	(1)	3425	3257	2429905
184	31.7	2.4	2.4	chr22	18056525	18056608	(32761860)	C	X8_LINE	LINE/CR1	(210)	86	3	2430140
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
276	20.0	5.3	13.5	chr22	21953082	21953185	(28865283)	C	MIR	SINE/MIR	(129)	133	39	2436268
1315	23.3	6.4	1.9	chr22	21953262	21953607	(28864861)	C	MLT1D	LTR/ERVL-MaLR	(65)	440	82	2436269
960	30.9	13.2	1.1	chr22	22516321	22517005	(28301463)	+	L2a	LINE/L2	2486	3265	(161)	2436977
495	13.0	2.0	8.3	chr22	22517015	22517122	(28301346)	+	AluJr4	SINE/Alu	199	299	(13)	2436978
2905	24.4	5.4	1.9	chr22	23438445	23439614	(27378854)	C	L1ME1	LINE/L1	(116)	6561	5358	2438294
301	29.7	6.6	2.3	chr22	24270379	24270502	(26547966)	+	L2a	LINE/L2	3268	3398	(28)	2439765
15	17.0	0.0	0.0	chr22	24270700	24270732	(26547736)	+	G-rich	Low_complexity	1	33	(0)	2439766
1480	23.1	5.3	4.5	chr22	25652028	25652152	(25166316)	+	L1MEg	LINE/L1	1546	1671	(4571)	2442623
1906	6.8	1.3	0.0	chr22	25652153	25652373	(25166095)	+	AluY	SINE/Alu	1	224	(87)	2442624
402	28.4	7.7	3.1	chr22	27314030	27314189	(23504279)	+	MIRb	SINE/MIR	101	268	(0)	2446437
286	34.4	6.6	0.0	chr22	27314355	27314482	(23503986)	C	L2a	LINE/L2	(80)	3346	3210	2446436
980	22.2	5.4	0.0	chr22	27463329	27463540	(23354928)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	2446742
495	27.3	4.3	1.3	chr22	27463559	27463714	(23354754)	+	MER5A1	DNA/hAT-Charlie	6	166	(0)	2446743
379	28.1	11.1	0.0	chr22	27463760	27463887	(23354581)	C	MIR	SINE/MIR	(115)	147	4	2446744
2255	8.2	0.0	0.3	chr22	27570297	27570610	(23247858)	C	AluYm1	SINE/Alu	(0)	311	1	2446993
799	32.1	6.0	5.1	chr22	27570618	27571147	(23247321)	+	L2b	LINE/L2	2827	3353	(22)	2446994
1483	17.1	5.3	0.0	chr22	30277394	30277688	(20540780)	C	AluSz6	SINE/Alu	(0)	312	18	2452282
1703	20.9	4.6	6.6	chr22	30277689	30277762	(20540706)	+	L1MB5	LINE/L1	6118	6171	(3)	2452280
1090	26.7	9.3	5.1	chr22	30985826	30986216	(19832252)	+	MLT1J	LTR/ERVL-MaLR	92	500	(12)	2453707
657	28.7	1.1	3.2	chr22	31218112	31218298	(19600170)	C	MIRb	SINE/MIR	(30)	238	56	2454285
758	18.5	19.6	0.7	chr22	34703376	34703652	(16114816)	C	Arthur1B	DNA/hAT-Tip100	(2)	1223	882	2461507
508	34.1	3.4	6.3	chr22	37155199	37155561	(13662907)	+	L2	LINE/L2	2670	3021	(398)	2466631
289	21.3	20.6	1.3	chr22	37155545	37155650	(13662818)	C	MIRb	SINE/MIR	(118)	150	18	2466632
6635	22.5	4.7	2.0	chr22	38371601	38375710	(12442758)	C	L1M2c	LINE/L1	(3141)	4421	791	2469370
1369	18.7	6.8	1.0	chr22	38386830	38387152	(12431316)	+	L1M5	LINE/L1	5263	5602	(577)	2469385
1587	26.0	6.6	0.9	chr22	38387159	38387589	(12430879)	+	L1MCa	LINE/L1	3	459	(6049)	2469387
266	30.8	10.3	5.1	chr22	38657204	38657340	(12161128)	+	MIRc	SINE/MIR	124	268	(0)	2470030
285	33.3	10.6	1.4	chr22	38657308	38657453	(12161015)	C	MIR	SINE/MIR	(80)	188	28	2470031
5109	15.8	4.6	10.6	chr22	40945989	40946714	(9871754)	C	L1MDa	LINE/L1	(4468)	2165	1438	2474707
3172	16.8	4.6	0.2	chr22	41052563	41053100	(9765368)	C	MER68	LTR/ERVL	(0)	563	1	2475018
1208	17.6	0.8	6.1	chr22	41053103	41053159	(9765309)	C	L1MB7	LINE/L1	(2310)	4334	4285	2475011
26	0.0	0.0	0.0	chr22	41053160	41053184	(9765284)	+	(GTTTT)n	Simple_repeat	1	25	(0)	2475019
1691	16.8	3.6	1.1	chr22	41053188	41053461	(9765007)	C	AluJo	SINE/Alu	(31)	281	1	2475020
1808	12.1	4.2	2.3	chr22	42726448	42726752	(8091716)	+	LTR62	LTR/ERVL	399	709	(0)	2478786
9374	18.8	4.4	2.4	chr22	43702277	43706163	(7112305)	+	L1M3b	LINE/L1	1218	4869	(2693)	2480649
422	27.4	8.7	5.8	chr22	45317819	45318008	(5500460)	C	MLT1H2	LTR/ERVL-MaLR	(292)	197	2	2483692
10368	15.3	10.6	2.1	chr22	45826083	45827129	(4991339)	+	L1MB3	LINE/L1	998	2191	(4193)	2484615
1940	19.9	3.0	0.0	chr22	46475285	46475646	(4342822)	+	L1MB3	LINE/L1	5809	6181	(2)	2485575
218	28.5	9.3	2.8	chr22	49393807	49393947	(1424521)	C	MIRb	SINE/MIR	(83)	185	35	2489298
20	0.0	0.0	0.0	chr22	49394054	49394075	(1424393)	+	(A)n	Simple_repeat	1	22	(0)	2489299
19	18.9	0.0	0.0	chr22	49394193	49394228	(1424240)	+	GA-rich	Low_complexity	1	36	(0)	2489300
1884	15.1	0.0	6.0	chr3	4521568	4521898	(193773661)	+	AluJb	SINE/Alu	1	311	(1)	2499155
13147	19.4	11.7	10.4	chr3	11068946	11070123	(187225436)	+	LOR1-int	LTR/ERV1	2453	3626	(4494)	2510687
602	23.9	12.9	2.6	chr3	11646844	11647114	(186648445)	+	MER5C	DNA/hAT-Charlie	1	303	(10)	2511789
3124	20.2	3.2	1.5	chr3	11799638	11800886	(186494673)	+	L1M2	LINE/L1	2145	3418	(3427)	2512134
5000	19.1	3.4	1.6	chr3	14712471	14713364	(183582195)	C	L1M4	LINE/L1	(5152)	2365	1462	2517473
579	17.1	13.3	10.2	chr3	15108579	15108670	(183186889)	+	L2	LINE/L2	2476	2586	(833)	2518199
2047	13.3	0.0	1.3	chr3	15108671	15108971	(183186588)	C	AluJb	SINE/Alu	(15)	297	1	2518200
10099	18.2	4.8	1.0	chr3	16576055	16577891	(181717668)	+	L1MA4	LINE/L1	411	2319	(5247)	2520736
3108	16.0	1.8	1.1	chr3	16577881	16578140	(181717419)	+	L1MA4	LINE/L1	3050	3313	(4253)	2520736
2180	10.9	0.7	2.0	chr3	16578141	16578442	(181717117)	+	AluSg7	SINE/Alu	1	298	(11)	2520737
982	32.8	6.9	1.9	chr3	17730256	17730736	(180564823)	+	MLT1G1	LTR/ERVL-MaLR	73	579	(0)	2522279
10725	23.7	5.2	3.6	chr3	28968687	28971537	(169324022)	C	L1MA4A	LINE/L1	(3945)	2904	6	2538544
301	20.3	0.0	1.5	chr3	31982000	31982064	(166313495)	C	MER96	DNA/hAT-Tip100	(111)	64	1	2542980
4086	26.8	7.0	2.7	chr3	34457485	34461105	(163834454)	C	L1M2	LINE/L1	(2936)	3906	825	2547448
17684	14.2	4.8	4.8	chr3	35919542	35921478	(162374081)	C	L1PA16	LINE/L1	(2840)	4009	1550	2549267
15	4.7	0.0	0.0	chr3	38346826	38346847	(159948712)	+	(CGGA)n	Simple_repeat	1	22	(0)	2552903
14175	24.5	5.2	4.3	chr3	41468502	41472286	(156823273)	+	L1MA7	LINE/L1	1232	4872	(2690)	2557514
2500	22.5	6.4	3.0	chr3	42410685	42411249	(155884310)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	39	2559052
2718	14.1	6.5	7.3	chr3	42411250	42411793	(155883766)	C	LTR45C	LTR/ERV1	(0)	539	1	2559053
1646	18.3	0.6	2.4	chr3	42453788	42454118	(155841441)	C	L1PA15-16	LINE/L1	(3983)	2870	2546	2559142
13	14.1	0.0	5.7	chr3	42454119	42454153	(155841406)	+	(GGACCT)n	Simple_repeat	1	35	(0)	2559143
975	29.5	3.6	5.7	chr3	43624986	43625555	(154670004)	C	L1MEf	LINE/L1	(5801)	839	26	2560888
15	15.9	0.0	2.7	chr3	46593359	46593415	(151702144)	+	G-rich	Low_complexity	1	55	(0)	2565648
188	36.0	15.0	0.0	chr3	49694713	49694837	(148600722)	C	L3	LINE/CR1	(162)	3937	3791	2571801
8761	13.1	2.7	1.6	chr3	50847904	50849035	(147446524)	C	L1PA15-16	LINE/L1	(3613)	3236	2103	2573658
10635	19.4	5.3	2.2	chr3	51084008	51085941	(147209618)	+	L1MA4	LINE/L1	2715	4691	(2871)	2573937
14176	22.2	2.4	1.9	chr3	54400324	54403078	(143892481)	+	L1MA6	LINE/L1	1881	4345	(3214)	2579022
1139	22.8	0.8	0.0	chr3	58551610	58551859	(139743700)	C	L1PB4	LINE/L1	(4046)	2807	2556	2586219
263	18.5	1.8	0.0	chr3	58551874	58551927	(139743632)	+	LTR64	LTR/ERV1	445	499	(29)	2586230
3560	21.5	9.9	3.2	chr3	58551938	58552899	(139742660)	C	L1M3f	LINE/L1	(4286)	1042	15	2586231
15277	16.4	2.5	2.5	chr3	58779531	58783852	(139511707)	+	L1MA4A	LINE/L1	2629	6950	(772)	2586638
525	29.4	15.8	4.6	chr3	59278222	59278893	(139016666)	+	L2b	LINE/L2	2521	3286	(89)	2587289
249	36.7	9.2	0.0	chr3	61384870	61385027	(136910532)	+	MIRb	SINE/MIR	95	268	(0)	2590468
1313	22.8	11.9	2.8	chr3	61385204	61385676	(136909883)	+	L1ME4b	LINE/L1	315	836	(56)	2590469
311	29.0	4.3	3.7	chr3	61438660	61438820	(136856739)	C	MamRep434	DNA/TcMar-Tigger	(246)	180	19	2590563
259	34.4	0.0	0.0	chr3	61438958	61439047	(136856512)	+	UCON83	SINE?	10	99	(3)	2590567
12847	21.6	1.8	0.8	chr3	63370927	63374119	(134921440)	+	L1PREC2	LINE/L1	1	4023	(4132)	2593917
1526	8.3	0.4	0.4	chr3	63374117	63374346	(134921213)	C	L1PREC2	LINE/L1	(2071)	4075	3846	2593918
21913	11.5	1.2	1.0	chr3	64113991	64119387	(134176172)	+	L1PA13	LINE/L1	1378	6780	(3)	2595172
2282	7.9	0.3	2.0	chr3	69242709	69243012	(129052547)	+	AluSq4	SINE/Alu	1	299	(12)	2603760
15	5.5	0.0	0.0	chr3	71511494	71511512	(126784047)	+	(A)n	Simple_repeat	1	19	(0)	2607345
196	30.8	11.7	1.4	chr3	73366439	73366583	(124928976)	+	L2a	LINE/L2	3025	3186	(240)	2611105
661	23.5	2.2	2.2	chr3	73366723	73366905	(124928654)	C	MER5A	DNA/hAT-Charlie	(1)	188	6	2611106
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
32951	6.7	2.1	0.2	chr3	79773347	79777503	(118518056)	+	HERVE_a-int	LTR/ERV1	3	4239	(3608)	2619899
24826	5.4	0.5	0.0	chr3	79777502	79780524	(118515035)	+	HERVE_a-int	LTR/ERV1	4810	7847	(0)	2619899
4229	24.0	4.0	4.8	chr3	79815097	79817698	(118477861)	C	L1PA15-16	LINE/L1	(3631)	3284	345	2619938
380	27.4	4.4	5.0	chr3	81564847	81565007	(116730552)	C	MER5B	DNA/hAT-Charlie	(0)	178	19	2622223
8206	24.3	5.6	3.0	chr3	94548382	94550779	(103744780)	+	L1PA15	LINE/L1	1	2463	(4040)	2634443
287	7.9	0.0	0.0	chr3	94550778	94550815	(103744744)	+	L1P3	LINE/L1	5450	5487	(685)	2634444
6471	5.5	0.3	0.0	chr3	94550825	94551672	(103743887)	C	L1PA4	LINE/L1	(2936)	3210	2360	2634445
11519	12.6	1.3	1.3	chr3	94677457	94679346	(103616213)	+	L1PA10	LINE/L1	1403	3297	(3164)	2634593
9464	19.9	3.3	1.5	chr3	96929191	96930710	(101364849)	C	L1PA10	LINE/L1	(3976)	3627	2071	2637183
4892	25.4	6.6	5.3	chr3	97137907	97141873	(101153686)	+	L1PA15-16	LINE/L1	3	3952	(2963)	2637461
10590	14.9	2.2	1.5	chr3	98929635	98931658	(99363901)	+	L1PA10	LINE/L1	2393	4428	(3153)	2639642
2250	16.6	11.5	2.0	chr3	101074077	101074223	(97221336)	+	MLT1D	LTR/ERVL-MaLR	1	149	(356)	2642534
1588	20.6	8.3	0.5	chr3	101074224	101074599	(97220960)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2642535
2250	16.6	11.5	2.0	chr3	101074600	101074907	(97220652)	+	MLT1D	LTR/ERVL-MaLR	150	505	(0)	2642534
3102	17.3	9.7	2.2	chr3	101518733	101519353	(96776206)	C	L1MCa	LINE/L1	(5836)	672	1	2643103
3361	25.6	3.7	3.3	chr3	102121603	102123858	(96171701)	C	L1MA9	LINE/L1	(4057)	3051	1134	2644106
1300	22.5	7.2	0.3	chr3	102123859	102124157	(96171402)	C	L1MA9	LINE/L1	(6709)	321	1	2644106
11462	20.6	5.7	3.0	chr3	105127685	105131299	(93164260)	C	L1PA16	LINE/L1	(681)	6188	2456	2647858
6783	20.7	4.2	2.2	chr3	112590855	112593260	(85702299)	C	L1M4c	LINE/L1	(2425)	4423	1516	2658048
6620	19.6	1.6	1.4	chr3	118027362	118029318	(80266241)	C	L1MA1	LINE/L1	(1806)	5109	2657	2665694
2688	21.2	7.3	1.2	chr3	118029300	118030128	(80265431)	C	L1MA1	LINE/L1	(4551)	2365	1526	2665694
9763	19.8	6.0	2.1	chr3	119424724	119427829	(78867730)	C	L1MA7	LINE/L1	(1108)	6454	3246	2667550
28	8.1	0.0	0.0	chr3	119427830	119427869	(78867690)	+	(T)n	Simple_repeat	1	40	(0)	2667553
2715	20.5	6.2	5.4	chr3	119427870	119428813	(78866746)	C	L1MA7	LINE/L1	(4321)	3245	2278	2667550
10021	15.7	3.3	2.9	chr3	119518792	119521268	(78774291)	+	L1MA5	LINE/L1	3094	5588	(1974)	2667723
4028	25.3	5.4	9.5	chr3	120979702	120983945	(77311614)	C	L1PB4	LINE/L1	(2960)	3889	2	2669917
969	33.5	6.8	3.6	chr3	131891859	131892329	(66403230)	+	L1MA6	LINE/L1	796	1282	(6284)	2687611
5711	20.1	4.1	1.7	chr3	131892308	131894332	(66401227)	+	L1MA6	LINE/L1	2893	5021	(2538)	2687611
638	18.3	3.7	0.0	chr3	132536039	132536169	(65759390)	C	MER119	DNA/hAT-Charlie	(0)	583	448	2688589
312	23.1	5.7	7.5	chr3	132536211	132536382	(65759177)	+	FRAM	SINE/Alu	33	276	(26)	2688590
249	21.4	0.0	0.0	chr3	132536437	132536478	(65759081)	C	MER119	DNA/hAT-Charlie	(540)	43	2	2688589
15044	18.2	3.1	1.2	chr3	134117545	134124506	(64171053)	C	L1PB4	LINE/L1	(7)	7118	1	2690959
13957	16.1	4.5	3.2	chr3	134500126	134505834	(63789725)	C	L1PA17	LINE/L1	(192)	7393	1708	2691565
71	8.7	0.0	0.0	chr3	136719592	136719690	(61575869)	+	(TGGG)n	Simple_repeat	1	99	(0)	2694922
15	4.7	0.0	0.0	chr3	136719691	136719712	(61575847)	+	(ATGG)n	Simple_repeat	1	22	(0)	2694923
184	25.0	16.3	2.7	chr3	136719720	136719793	(61575766)	C	MIR	SINE/MIR	(157)	105	20	2694924
2302	11.0	0.3	0.0	chr3	136719897	136720195	(61575364)	+	AluSp	SINE/Alu	3	302	(11)	2694925
236	29.2	0.0	0.0	chr3	138125606	138125677	(60169882)	C	L2a	LINE/L2	(301)	3125	3054	2697002
734	24.6	15.6	5.4	chr3	138125813	138126258	(60169301)	C	L2a	LINE/L2	(365)	3054	2555	2697002
10963	21.4	5.5	3.4	chr3	139052047	139055843	(59239716)	C	L1M2	LINE/L1	(2890)	4315	20	2698753
4373	17.4	2.1	3.1	chr3	139074263	139075182	(59220377)	+	L1MA4	LINE/L1	2810	3721	(3925)	2698778
3274	24.2	5.6	3.1	chr3	140409541	140411661	(57883898)	+	L1MA9	LINE/L1	2049	4157	(3405)	2700806
9687	11.8	5.3	1.7	chr3	140518853	140520265	(57775294)	C	L1PA10	LINE/L1	(3006)	4575	3124	2700970
2161	23.2	2.1	1.8	chr3	142061374	142061886	(56233673)	+	MLT2B3	LTR/ERVL	1	515	(39)	2703463
2024	14.0	0.7	3.2	chr3	142554640	142554953	(55740606)	+	AluJr	SINE/Alu	1	306	(6)	2704296
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
2069	11.1	2.9	2.3	chr3	143076614	143076919	(55218640)	C	AluSx3	SINE/Alu	(3)	308	1	2705154
14	26.8	3.2	6.1	chr3	143971700	143971794	(54323765)	+	(CCGCTC)n	Simple_repeat	1	98	(0)	2706423
15	16.6	0.0	0.0	chr3	143971976	143972002	(54323557)	+	(GC)n	Simple_repeat	1	27	(0)	2706424
17712	17.1	2.0	5.4	chr3	146873504	146874474	(51421085)	C	L1PA16	LINE/L1	(3752)	3097	2139	2710123
13979	20.9	2.0	1.0	chr3	147070948	147071765	(51223794)	+	L1PA17	LINE/L1	2054	3147	(3702)	2710366
396	31.2	3.9	3.4	chr3	154253336	154253514	(44042045)	+	MIRb	SINE/MIR	36	215	(53)	2720935
223	39.4	0.0	1.0	chr3	155026981	155027080	(43268479)	+	L2c	LINE/L2	2381	2479	(940)	2721929
380	28.6	10.8	5.4	chr3	155027476	155027623	(43267936)	+	L2c	LINE/L2	2977	3136	(251)	2721929
22	25.3	0.0	1.7	chr3	155676512	155676599	(42618960)	+	(CA)n	Simple_repeat	1	86	(0)	2722802
1655	18.9	2.3	0.7	chr3	155948967	155949263	(42346296)	+	AluJr	SINE/Alu	1	302	(10)	2723336
6279	23.3	4.4	5.5	chr3	161462529	161465220	(36830339)	C	L1M2	LINE/L1	(3805)	3760	361	2731385
17262	10.9	1.8	1.2	chr3	167511536	167514628	(30780931)	+	L1PA10	LINE/L1	237	3347	(2984)	2738796
9026	17.4	3.1	2.1	chr3	168461513	168463310	(29832249)	C	L1M4c	LINE/L1	(4548)	1836	21	2740114
204	34.3	2.9	6.2	chr3	171413426	171413602	(26881957)	+	L2b	LINE/L2	2988	3158	(217)	2744480
1757	21.0	10.1	7.0	chr3	175649938	175650520	(22645039)	+	L1MB8	LINE/L1	5575	6177	(1)	2750678
18137	15.9	2.7	0.6	chr3	175983989	175987507	(22308052)	C	L1PA17	LINE/L1	(1028)	7113	3536	2751097
203	35.3	17.3	3.4	chr3	185200757	185201580	(13093979)	C	L2	LINE/L2	(2052)	1367	406	2765955
343	26.2	5.3	9.3	chr3	190566098	190566236	(7729323)	+	L2a	LINE/L2	3294	3426	(0)	2775310
4583	22.9	5.5	2.4	chr3	193247630	193249369	(5046190)	C	L1MA7	LINE/L1	(3191)	4371	2580	2779176
12	4.8	4.5	0.0	chr3	193744473	193744494	(4551065)	+	(GGCA)n	Simple_repeat	1	23	(0)	2779929
8022	16.6	7.2	1.2	chr3	193952926	193955304	(4340255)	C	L1MA5	LINE/L1	(2237)	5325	2757	2780263
271	26.4	2.7	0.0	chr3	194323031	194323102	(3972457)	+	MIR3	SINE/MIR	61	134	(74)	2780935
9266	24.8	1.5	5.0	chr4	2101270	2104232	(188110323)	+	L1M2	LINE/L1	10	2867	(3982)	2791089
1468	15.6	4.1	0.0	chr4	2104235	2104516	(188110039)	C	L1M4	LINE/L1	(368)	5816	5523	2791090
1328	22.6	6.8	0.0	chr4	3650452	3650810	(186563745)	C	L1MB3	LINE/L1	(23)	6160	5776	2793429
293	34.7	3.9	0.8	chr4	3650835	3650959	(186563596)	C	L3	LINE/CR1	(90)	4009	3881	2793430
1644	12.8	5.4	6.4	chr4	4802015	4802295	(185412260)	+	AluSx1	SINE/Alu	5	282	(30)	2795492
26	3.2	0.0	2.9	chr4	4802296	4802329	(185412226)	+	(AATA)n	Simple_repeat	1	34	(0)	2795493
711	28.0	2.5	1.8	chr4	4802474	4802683	(185411872)	C	Tigger18a	DNA/TcMar-Tigger	(337)	515	304	2795494
4694	18.4	1.4	0.3	chr4	13671325	13672592	(176541963)	+	L1PA15-16	LINE/L1	2008	3290	(3559)	2809685
9291	15.2	1.9	3.6	chr4	19154837	19157137	(171057418)	C	L1PA13	LINE/L1	(3290)	3625	556	2819071
17	22.7	2.1	0.0	chr4	20304268	20304317	(169910238)	+	A-rich	Low_complexity	1	51	(0)	2820752
1183	23.5	8.5	10.0	chr4	20304410	20304900	(169909655)	+	MLT1H2	LTR/ERVL-MaLR	1	483	(6)	2820753
1472	21.5	2.2	1.4	chr4	24619820	24620396	(165594159)	C	L1MA9	LINE/L1	(3766)	2610	2025	2827408
1018	25.5	2.6	2.0	chr4	24620441	24620740	(165593815)	+	L1M1	LINE/L1	2871	3172	(4393)	2827411
2107	11.2	0.0	0.3	chr4	25988569	25988855	(164225700)	C	AluSx	SINE/Alu	(25)	287	2	2830154
1386	16.1	1.9	9.4	chr4	26328639	26328924	(163885631)	C	AluJo	SINE/Alu	(23)	289	26	2830862
2325	11.0	1.3	0.0	chr4	26328992	26329291	(163885264)	C	AluSp	SINE/Alu	(8)	305	2	2830863
2043	25.9	13.4	3.4	chr4	26341643	26342001	(163872554)	C	L2a	LINE/L2	(1361)	2058	1619	2830890
1046	19.6	0.0	0.5	chr4	26342002	26342191	(163872364)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	2830893
2043	25.9	13.4	3.4	chr4	26342192	26342231	(163872324)	C	L2a	LINE/L2	(1801)	1618	1580	2830890
16	0.0	0.0	0.0	chr4	26342266	26342283	(163872272)	+	(A)n	Simple_repeat	1	18	(0)	2830894
246	31.8	2.3	1.2	chr4	26342373	26342458	(163872097)	C	MIRc	SINE/MIR	(160)	108	22	2830895
15477	16.2	8.3	5.5	chr4	26444667	26445535	(163769020)	+	L1PB3	LINE/L1	2287	3226	(3636)	2831056
7852	24.0	8.5	5.2	chr4	30406224	30409523	(159805032)	+	L1M2	LINE/L1	901	4331	(3231)	2836669
13009	24.7	4.2	3.2	chr4	33334416	33341192	(156873363)	C	L1PB4	LINE/L1	(0)	7575	731	2840653
15	9.7	0.0	0.0	chr4	42656757	42656778	(147557777)	+	(AC)n	Simple_repeat	1	22	(0)	2855919
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
2364	19.6	5.0	4.4	chr4	49493900	49494948	(140719607)	+	L1MB8	LINE/L1	4777	5836	(342)	2865154
2241	13.0	7.3	0.5	chr4	49494958	49495361	(140719194)	+	MER61C	LTR/ERV1	11	428	(0)	2865155
2441	4.0	0.0	0.4	chr4	54232609	54232885	(135981670)	C	AluSx1	SINE/Alu	(36)	276	1	2868996
713	21.6	6.4	0.0	chr4	54927293	54927454	(135287101)	+	MER5B	DNA/hAT-Charlie	1	173	(5)	2870110
22165	8.0	0.9	0.2	chr4	55190924	55194949	(135019606)	+	L1PA8	LINE/L1	1434	5470	(702)	2870491
3912	25.4	5.1	2.1	chr4	60280463	60281087	(129933468)	C	L1M2	LINE/L1	(4181)	2987	2332	2877991
11536	19.1	2.8	1.8	chr4	63217287	63219828	(126994727)	C	L1PA11	LINE/L1	(3950)	2533	10	2881760
3159	18.2	3.3	0.2	chr4	63326945	63327642	(126886913)	C	L1P4a	LINE/L1	(3782)	2701	1980	2881887
3156	20.5	9.2	3.2	chr4	63395644	63396592	(126817963)	+	LTR27E	LTR/ERV1	1	1755	(0)	2881941
239	29.6	5.7	6.4	chr4	63396609	63396872	(126817683)	C	L1MEg	LINE/L1	(4463)	1621	1360	2881942
6354	22.8	4.8	1.9	chr4	63986307	63987561	(126226994)	+	L1PB3	LINE/L1	2463	3773	(3089)	2882643
1974	11.9	3.0	1.2	chr4	70133590	70133920	(120080635)	+	MER1B	DNA/hAT-Charlie	3	339	(0)	2890217
482	27.7	15.8	2.7	chr4	70133961	70134179	(120080376)	+	MIRb	SINE/MIR	16	268	(0)	2890218
1850	29.5	7.2	1.1	chr4	70460569	70461261	(119753294)	C	L1M2b	LINE/L1	(6471)	738	1	2890601
1646	17.0	1.0	6.9	chr4	70830146	70830462	(119384093)	+	AluJo	SINE/Alu	1	298	(14)	2891269
283	26.1	12.8	2.5	chr4	70830476	70830541	(119384014)	+	L1MC5a	LINE/L1	2347	2421	(356)	2891270
1972	14.7	0.0	1.4	chr4	70830542	70830834	(119383721)	+	AluSz	SINE/Alu	6	294	(18)	2891271
1299	25.4	5.0	5.2	chr4	74254222	74254852	(115959703)	+	L1M3e	LINE/L1	2500	3186	(4379)	2895912
10233	20.0	4.8	1.8	chr4	80824090	80826443	(109388112)	+	L1MB3	LINE/L1	19	2446	(3936)	2905289
925	13.5	0.0	0.0	chr4	82491669	82491801	(107722754)	C	FLAM_C	SINE/Alu	(10)	133	1	2907706
199	42.8	4.5	4.8	chr4	82838424	82838671	(107375884)	+	L2	LINE/L2	2678	2924	(495)	2908318
2664	10.0	10.7	0.7	chr4	83234495	83234897	(106979658)	+	LTR7	LTR/ERV1	1	448	(2)	2909132
1325	13.7	2.9	2.5	chr4	83235334	83235407	(106979148)	+	L1M2	LINE/L1	2550	2625	(4224)	2909133
2590	11.6	5.8	1.6	chr4	83235408	83235838	(106978717)	+	LTR7	LTR/ERV1	1	450	(0)	2909134
17	20.9	2.9	5.7	chr4	83334900	83334967	(106879588)	+	(CCTC)n	Simple_repeat	1	70	(0)	2909320
14296	21.0	3.5	1.8	chr4	84259244	84262148	(105952407)	+	L1PB4	LINE/L1	1377	4192	(2723)	2910883
23	31.3	5.2	0.7	chr4	88379171	88379305	(101835250)	+	G-rich	Low_complexity	1	142	(0)	2917064
2377	5.6	0.3	1.8	chr4	90533085	90533394	(99681161)	C	AluY	SINE/Alu	(0)	311	1	2920063
1409	30.8	11.0	2.7	chr4	90533395	90533705	(99680850)	C	L1M8	LINE/L1	(2005)	350	4	2920062
2959	25.2	6.9	2.7	chr4	91823962	91825963	(98388592)	C	L1MB1	LINE/L1	(3531)	4028	2001	2921572
6849	15.8	1.2	0.6	chr4	91832491	91833082	(98381473)	C	L1PA15-16	LINE/L1	(3857)	2992	2402	2921585
1705	18.7	7.1	1.2	chr4	91833083	91833401	(98381154)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	2921586
4244	28.6	13.7	7.2	chr4	95255279	95256659	(94957896)	+	L2	LINE/L2	1250	2829	(590)	2926173
20	0.0	0.0	0.0	chr4	95525597	95525618	(94688937)	+	(A)n	Simple_repeat	1	22	(0)	2926529
406	29.9	10.1	2.0	chr4	95526014	95526214	(94688341)	C	Tigger14a	DNA/TcMar-Tigger	(9)	315	97	2926530
4103	27.2	2.8	3.2	chr4	96369384	96371401	(93843154)	C	L1PA15-16	LINE/L1	(3694)	3218	923	2927593
5311	21.8	5.7	3.4	chr4	96494182	96497111	(93717444)	+	L1M2	LINE/L1	358	4338	(3224)	2927740
8690	24.9	5.2	3.0	chr4	100441101	100442841	(89771714)	C	L1MA9	LINE/L1	(3583)	3976	2219	2933053
14469	14.9	2.5	1.1	chr4	100772562	100776199	(89438356)	C	L1PA15-16	LINE/L1	(1437)	5412	1720	2933478
2985	21.8	7.8	0.1	chr4	100861780	100862746	(89351809)	C	L1PBb	LINE/L1	(3664)	3251	2202	2933604
397	21.8	10.2	6.8	chr4	102077397	102077529	(88137026)	+	MER117	DNA/hAT-Charlie	57	194	(3)	2935182
762	26.5	2.2	2.2	chr4	102201743	102201966	(88012589)	C	L1M4	LINE/L1	(7274)	243	20	2935368
15325	19.3	3.9	1.9	chr4	102704964	102709038	(87505517)	+	L1MA6	LINE/L1	719	4868	(2697)	2936033
2190	25.4	8.2	4.4	chr4	102858790	102859389	(87355166)	C	L1M3c	LINE/L1	(4171)	3395	2668	2936257
622	20.4	0.0	0.0	chr4	102859390	102859497	(87355058)	C	U13_	snRNA	(0)	108	1	2936267
4505	24.6	3.6	2.1	chr4	104352470	104354169	(85860386)	+	L1MA3	LINE/L1	1593	3137	(3775)	2938107
1730	32.1	4.6	2.0	chr4	107478728	107479360	(82735195)	+	L1M2	LINE/L1	1374	2075	(5491)	2942129
734	15.3	1.5	0.8	chr4	107479360	107479491	(82735064)	C	L1M2	LINE/L1	(5377)	1472	1340	2942130
2653	20.2	2.5	3.7	chr4	107479506	107480432	(82734123)	+	L1M2	LINE/L1	3238	4162	(3400)	2942129
4069	17.9	3.8	2.5	chr4	108547559	108547818	(81666737)	+	L1MA4A	LINE/L1	1757	2020	(4829)	2943608
14230	17.8	2.7	4.1	chr4	108547822	108549836	(81664719)	+	L1MA4A	LINE/L1	2477	4486	(2359)	2943608
343	28.9	12.2	3.8	chr4	110133996	110134257	(80080298)	C	L2a	LINE/L2	(0)	3387	3100	2946012
15386	19.5	2.4	1.6	chr4	114251554	114258231	(75956324)	+	L1PA17	LINE/L1	343	6919	(16)	2951855
18625	15.8	1.7	1.2	chr4	118045959	118051621	(72162934)	+	L1PA16	LINE/L1	1	5696	(787)	2956379
302	33.2	7.4	7.1	chr4	118835728	118836038	(71378517)	+	L1M4b	LINE/L1	210	521	(6346)	2957575
4793	25.9	6.6	5.0	chr4	122488845	122491250	(67723305)	C	L1M2	LINE/L1	(4159)	3407	402	2962542
4386	25.0	7.0	4.2	chr4	123290866	123294065	(66920490)	C	L1PB3	LINE/L1	(3568)	3347	348	2963740
660	31.0	16.2	2.4	chr4	125303747	125304116	(64910439)	C	LTR67B	LTR/ERVL	(0)	620	190	2966443
19	0.0	3.7	0.0	chr4	125304192	125304218	(64910337)	+	(AAAC)n	Simple_repeat	1	28	(0)	2966444
2047	15.1	4.9	5.6	chr4	126431002	126431430	(63783125)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	2967803
23807	10.4	3.0	0.9	chr4	127716988	127723369	(62491186)	C	L1PA10	LINE/L1	(0)	6483	12	2969448
10765	24.1	4.6	3.8	chr4	127846791	127848294	(62366261)	+	L1PA17	LINE/L1	2047	3597	(3315)	2969632
5788	21.5	5.6	3.1	chr4	128189351	128190437	(62024118)	C	L1MA4	LINE/L1	(3829)	3733	2658	2970340
5296	23.1	3.9	9.8	chr4	130647820	130650341	(59564214)	+	L1M2	LINE/L1	2311	4677	(2182)	2973683
9607	23.7	9.0	4.6	chr4	135343739	135350818	(54863737)	+	L1MA4	LINE/L1	358	7709	(10)	2979184
9156	22.8	2.8	3.4	chr4	136260086	136264421	(53950134)	+	L1PA17	LINE/L1	84	4470	(2445)	2980259
675	18.8	0.8	1.5	chr4	141133871	141134005	(49080550)	C	MER5A	DNA/hAT-Charlie	(48)	141	8	2987302
11170	21.4	4.7	2.9	chr4	141703757	141707791	(48506764)	C	L1MA6	LINE/L1	(1693)	5869	2062	2988026
10807	19.3	3.1	2.9	chr4	142945113	142947893	(47266662)	+	L1P4d	LINE/L1	4	2812	(4123)	2989605
2236	12.8	0.0	0.3	chr4	142947894	142948198	(47266357)	+	AluSx1	SINE/Alu	1	304	(8)	2989606
9126	19.2	3.3	7.3	chr4	144806296	144808578	(45405977)	+	L1MA4A	LINE/L1	940	3253	(3956)	2992065
1716	20.4	1.7	0.5	chr4	146007226	146007505	(44207050)	C	L1M2	LINE/L1	(4077)	3489	3205	2993685
1176	6.6	0.0	0.0	chr4	146007508	146007643	(44206912)	C	AluYc	SINE/Alu	(16)	283	148	2993689
974	32.3	10.9	1.2	chr4	146336325	146336728	(43877827)	C	L3	LINE/CR1	(1223)	2876	2429	2994171
19	0.0	6.9	0.0	chr4	147053786	147053814	(43160741)	+	(ACA)n	Simple_repeat	1	31	(0)	2995118
338	22.9	4.0	4.0	chr4	147054190	147054289	(43160266)	+	LTR85b	LTR/Gypsy?	685	784	(0)	2995119
487	32.1	5.6	2.1	chr4	154559232	154559419	(35655136)	C	MLT1O	LTR/ERVL-MaLR	(347)	195	1	3006215
16173	22.3	3.3	3.6	chr4	170373524	170379589	(19834966)	+	L1PA15-16	LINE/L1	67	6090	(825)	3027676
653	32.8	6.1	0.9	chr4	170476411	170476785	(19737770)	+	L2a	LINE/L2	2850	3243	(183)	3027798
12651	18.4	4.7	2.4	chr4	173624149	173628023	(16586532)	C	L1M2	LINE/L1	(2451)	5111	1144	3031863
17615	8.5	1.5	1.0	chr4	173718000	173721218	(16493337)	+	L1PA10	LINE/L1	1678	4912	(1419)	3032002
690	29.5	3.4	0.5	chr4	184535745	184535945	(5678610)	C	MIRb	SINE/MIR	(12)	256	50	3046744
636	27.2	8.4	6.6	chr4	184536137	184536439	(5678116)	C	L2a	LINE/L2	(1)	3425	3117	3046745
574	11.5	0.0	13.3	chr4	184536447	184536566	(5677989)	+	MLT2C1	LTR/ERVL	1	104	(293)	3046746
10809	16.0	2.9	1.1	chr4	187737656	187740770	(2473785)	+	L1PA15-16	LINE/L1	31	3417	(3432)	3051417
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
5740	16.8	7.9	3.2	chr5	125136	126679	(181411580)	C	L1M4c	LINE/L1	(62)	2753	706	3055073
13	28.1	3.6	4.6	chr5	558082	558165	(180980094)	+	(ACC)n	Simple_repeat	1	87	(0)	3055511
2879	26.4	4.8	1.4	chr5	949690	951555	(180586704)	C	L1MC3	LINE/L1	(4915)	1130	223	3055822
17	20.7	3.5	10.0	chr5	10306359	10306474	(171231785)	+	GA-rich	Low_complexity	1	120	(0)	3066657
338	28.8	10.2	2.0	chr5	14239518	14239704	(167298555)	C	MIRb	SINE/MIR	(48)	214	11	3071984
1057	26.7	8.2	7.0	chr5	19902184	19902710	(161635549)	+	MLT1F2	LTR/ERVL-MaLR	3	536	(33)	3079945
7477	24.6	5.9	1.3	chr5	24758440	24761229	(156777030)	C	L1PB4	LINE/L1	(1614)	5501	2578	3086471
5734	22.4	3.1	1.4	chr5	29552857	29555076	(151983183)	C	L1MA5	LINE/L1	(2377)	5185	2927	3092515
1973	13.2	3.5	0.0	chr5	32509980	32510259	(149028000)	+	AluJb	SINE/Alu	1	290	(22)	3097008
18464	11.5	1.4	2.9	chr5	43756229	43758769	(137779490)	C	L1PA11	LINE/L1	(2179)	5402	2886	3113533
3442	12.1	2.5	0.0	chr5	51146497	51147239	(130391020)	+	L1PREC2	LINE/L1	5074	5829	(331)	3117403
552	14.1	0.0	0.0	chr5	51147244	51147314	(130390945)	+	AluYk11	SINE/Alu	5	75	(236)	3117404
19098	13.5	1.6	0.5	chr5	51147316	51151599	(130386660)	+	L1PA16	LINE/L1	2530	6860	(9)	3117405
2299	23.7	0.7	1.3	chr5	57648077	57648641	(123889618)	C	L1PB4	LINE/L1	(3980)	2869	2309	3127061
26182	4.7	0.4	0.1	chr5	58536155	58542290	(122995969)	C	L1PA3	LINE/L1	(3)	6152	3	3128263
18464	14.4	1.8	0.8	chr5	62985096	62989651	(118548608)	+	L1PA16	LINE/L1	1396	5988	(515)	3134606
1913	18.0	7.5	3.5	chr5	65110991	65111469	(116426790)	C	L1MB5	LINE/L1	(5338)	2179	1681	3137381
1939	19.5	5.5	2.6	chr5	65111450	65112093	(116426166)	+	L1M4	LINE/L1	715	1413	(6104)	3137383
1603	20.4	6.6	6.8	chr5	65428942	65429421	(116108838)	+	MER39	LTR/ERV1	1	594	(113)	3137801
194	27.8	1.8	0.0	chr5	71881327	71881380	(109656879)	+	MamRTE1	LINE/RTE-BovB	3756	3810	(2)	3148195
809	28.9	4.4	6.9	chr5	81013082	81013546	(100524713)	C	L1MEb	LINE/L1	(5477)	593	141	3162573
32	20.1	7.9	0.9	chr5	81013586	81013686	(100524573)	+	(AT)n	Simple_repeat	1	109	(0)	3162574
11843	19.2	2.8	2.3	chr5	85047565	85050761	(96487498)	+	L1PA15-16	LINE/L1	7	2899	(3954)	3168058
1408	15.2	9.5	0.0	chr5	85050764	85051020	(96487239)	+	L1PA16	LINE/L1	5878	6161	(5)	3168059
551	25.0	7.0	0.0	chr5	87495214	87495333	(94042926)	C	L1M4c	LINE/L1	(5752)	561	433	3171183
6579	18.2	4.2	1.8	chr5	87495334	87497614	(94040645)	+	L1PB4	LINE/L1	2346	6495	(363)	3171188
3751	20.9	2.4	1.1	chr5	87913010	87914443	(93623816)	+	L1M2	LINE/L1	2758	4223	(3339)	3171676
22003	12.7	1.2	2.9	chr5	88586165	88592819	(92945440)	+	L1PA11	LINE/L1	13	6489	(0)	3172549
19194	11.2	1.2	0.9	chr5	92790158	92793750	(88744509)	C	L1PA13	LINE/L1	(1026)	5740	2137	3177904
15976	16.2	4.1	4.7	chr5	93973260	93975033	(87563226)	+	L1PA17	LINE/L1	2094	3804	(3111)	3179283
18464	16.6	2.5	0.8	chr5	95147385	95150123	(86388136)	C	L1PA16	LINE/L1	(3693)	2921	1	3180742
9682	25.2	4.7	2.1	chr5	97597862	97600199	(83938060)	C	L1MA7	LINE/L1	(4158)	3407	1327	3184152
2660	21.6	3.3	6.4	chr5	105603223	105604066	(75934193)	C	L1PBa	LINE/L1	(3969)	2894	2078	3194036
12744	16.6	3.3	2.1	chr5	105863510	105865910	(75672349)	+	L1PA14	LINE/L1	2718	5164	(1509)	3194359
3658	21.2	4.2	4.8	chr5	105865914	105866724	(75671535)	C	L1PBb	LINE/L1	(4163)	2753	1951	3194361
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
217	27.9	8.0	0.0	chr5	108748072	108748165	(72790094)	C	L2c	LINE/L2	(23)	3403	3276	3198087
2413	22.5	1.3	2.0	chr5	110221092	110221645	(71316614)	C	L1M2c	LINE/L1	(4171)	2678	2129	3199983
10675	19.1	6.2	1.3	chr5	111556434	111561392	(69976867)	C	L1PA8	LINE/L1	(1147)	5229	19	3201609
3125	16.6	1.3	0.2	chr5	111898674	111899284	(69638975)	+	L1M2	LINE/L1	2895	3512	(4054)	3202050
1368	21.8	0.0	1.1	chr5	111899286	111899546	(69638713)	+	AluJr4	SINE/Alu	55	312	(0)	3202051
12	13.9	0.0	0.0	chr5	115180302	115180325	(66357934)	+	(GGC)n	Simple_repeat	1	24	(0)	3206402
1899	18.5	14.2	2.1	chr5	117154824	117155308	(64382951)	+	MER101B	LTR/ERV1	1	502	(68)	3209230
361	28.1	0.0	2.5	chr5	117155335	117155444	(64382815)	C	L1ME3G	LINE/L1	(498)	5626	5535	3209231
13551	20.1	3.2	2.2	chr5	122256002	122257221	(59281038)	C	L1PB3	LINE/L1	(3623)	3292	2062	3215689
15	5.5	0.0	0.0	chr5	125201445	125201463	(56336796)	+	(A)n	Simple_repeat	1	19	(0)	3219748
252	32.5	6.8	6.3	chr5	125201978	125202284	(56335975)	+	L2a	LINE/L2	3061	3423	(3)	3219749
3958	25.0	4.1	2.9	chr5	125703934	125706710	(55831549)	+	L1M4	LINE/L1	488	3758	(2983)	3220357
404	29.1	7.2	1.4	chr5	125883577	125883719	(55654540)	+	L2a	LINE/L2	3275	3426	(0)	3220551
280	33.3	2.0	10.0	chr5	126875783	126876002	(54662257)	C	MIRb	SINE/MIR	(37)	231	30	3222125
12	17.8	7.4	3.5	chr5	127126906	127126959	(54411300)	+	(TGCT)n	Simple_repeat	1	58	(0)	3222435
703	31.4	6.5	8.3	chr5	127127247	127127365	(54410894)	C	L2c	LINE/L2	(1)	3386	3261	3222436
13	17.7	5.3	0.0	chr5	127290221	127290258	(54248001)	+	(CCACCCT)n	Simple_repeat	1	40	(0)	3222643
15	8.8	0.0	0.0	chr5	127290710	127290733	(54247526)	+	(GCA)n	Simple_repeat	1	24	(0)	3222644
16065	23.4	5.6	6.0	chr5	131928164	131929529	(49608730)	C	L1MB1	LINE/L1	(3898)	2486	1185	3228715
13654	18.4	5.9	1.1	chr5	135616819	135621080	(45917179)	C	L1MA4A	LINE/L1	(2354)	5208	718	3234566
15850	18.5	2.8	1.1	chr5	135676157	135680246	(45858013)	C	L1MA4A	LINE/L1	(2673)	4889	719	3234633
1970	11.7	3.6	1.7	chr5	137321595	137321894	(44216365)	+	AluSg7	SINE/Alu	1	306	(3)	3236801
2641	27.3	7.1	4.9	chr5	137321895	137322098	(44216161)	+	L1MB1	LINE/L1	1973	2165	(5440)	3236798
1573	16.3	2.4	0.8	chr5	137322099	137322349	(44215910)	+	AluJb	SINE/Alu	45	299	(13)	3236802
362	18.4	0.8	0.0	chr5	138685658	138685730	(42852529)	C	FLAM_C	SINE/Alu	(81)	52	2	3239352
289	31.5	3.5	1.8	chr5	138685844	138685956	(42852303)	C	MIRc	SINE/MIR	(7)	261	147	3239353
683	24.3	4.0	6.1	chr5	138685975	138686154	(42852105)	+	MLT1K	LTR/ERVL-MaLR	71	246	(349)	3239354
897	32.7	1.3	0.3	chr5	138686232	138686538	(42851721)	+	L2	LINE/L2	1338	1647	(1772)	3239355
28	0.0	0.0	0.0	chr5	142821301	142821327	(38716932)	+	(T)n	Simple_repeat	1	27	(0)	3246726
810	20.6	0.0	0.0	chr5	142821564	142821704	(38716555)	+	MER5A1	DNA/hAT-Charlie	25	165	(1)	3246727
1982	15.9	0.3	1.3	chr5	145890080	145890388	(35647871)	C	AluSz	SINE/Alu	(5)	307	2	3251482
2463	16.5	1.4	1.4	chr5	145890389	145891146	(35647113)	+	L1PA15-16	LINE/L1	2145	3220	(3629)	3251481
293	30.1	0.4	0.0	chr5	148915261	148915376	(32622883)	C	MIR3	SINE/MIR	(15)	193	82	3256680
12413	16.2	1.7	0.7	chr5	149099779	149103087	(32435172)	+	L1M2	LINE/L1	2484	5828	(1734)	3257004
26	6.1	0.0	0.0	chr5	157949188	157949221	(23589038)	+	(TTTGT)n	Simple_repeat	1	34	(0)	3273694
1429	13.5	3.2	10.9	chr5	157949224	157949526	(23588733)	C	AluJr	SINE/Alu	(33)	279	1	3273695
636	29.8	10.8	6.9	chr5	158013902	158014449	(23523810)	C	MamGypLTR3	LTR/Gypsy	(55)	839	268	3273844
5290	22.2	2.1	3.9	chr5	161003075	161004305	(20533954)	C	L1M2	LINE/L1	(3903)	3662	2470	3279048
33	0.0	0.0	0.0	chr5	164296655	164296685	(17241574)	+	(CTGC)n	Simple_repeat	1	31	(0)	3283801
317	33.3	3.4	2.7	chr5	169696836	169696983	(11841276)	+	MIR3	SINE/MIR	54	202	(6)	3292219
1056	29.2	7.1	8.8	chr5	169697086	169697588	(11840671)	C	MLT1K	LTR/ERVL-MaLR	(14)	581	88	3292220
356	33.3	2.8	0.0	chr5	171595919	171596056	(9942203)	+	MIRb	SINE/MIR	40	181	(87)	3295648
636	13.8	7.6	0.0	chr5	173052447	173052555	(8485704)	C	HY1	scRNA	(1)	118	1	3298832
2321	8.5	0.0	5.3	chr5	173052563	173052881	(8485378)	C	AluSq2	SINE/Alu	(11)	302	1	3298833
455	34.4	7.8	0.0	chr5	175379042	175379323	(6158936)	+	L1ME4b	LINE/L1	108	413	(5987)	3303331
2252	23.2	8.0	4.5	chr5	175379511	175380338	(6157921)	+	L1ME4b	LINE/L1	2836	3699	(2620)	3303331
186	27.6	17.5	6.0	chr5	177072114	177072279	(4465980)	C	MIRb	SINE/MIR	(57)	211	23	3306587
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
4025	22.8	4.8	5.6	chr5	179088190	179089573	(2448686)	C	L1MCb	LINE/L1	(5322)	1806	19	3310350
4183	17.5	4.5	3.5	chr5	181076681	181077640	(460619)	+	L1MA9	LINE/L1	4315	5017	(1126)	3313611
2601	18.7	12.0	3.7	chr5	181077629	181078036	(460223)	+	L1MC2	LINE/L1	2869	3336	(4416)	3313607
187	21.1	7.3	0.0	chr5	181100166	181100203	(438056)	+	MamRTE1	LINE/RTE-BovB	2000	2040	(1772)	3313643
702	0.0	0.0	0.0	chr5	181173650	181173724	(364535)	+	tRNA-Val-GTG	tRNA	1	75	(1)	3313784
728	1.2	0.0	0.0	chr5	181174044	181174125	(364134)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3313785
195	27.4	3.1	6.1	chr6	297105	297170	(170508809)	+	MIRc	SINE/MIR	71	134	(134)	3314657
208	28.9	11.3	6.9	chr6	297173	297332	(170508647)	C	MIR3	SINE/MIR	(3)	205	38	3314658
400	25.4	4.6	5.0	chr6	297195	297348	(170508631)	+	MIRc	SINE/MIR	79	246	(22)	3314659
2406	8.5	0.0	0.3	chr6	626599	626892	(170179087)	C	AluSx1	SINE/Alu	(19)	293	1	3315030
392	28.8	11.1	0.0	chr6	2915147	2915306	(167890673)	+	Helitron3Na_Mam	RC/Helitron	35	214	(272)	3318103
238	31.0	0.0	0.0	chr6	2968784	2968841	(167837138)	C	HAL1	LINE/L1	(1708)	799	742	3318170
12	18.6	5.4	0.0	chr6	5004047	5004083	(165801896)	+	(CGCCC)n	Simple_repeat	1	39	(0)	3321336
8824	16.7	11.2	3.3	chr6	5050065	5051672	(165754307)	+	L1M4c	LINE/L1	31	1713	(4671)	3321427
2200	15.7	4.2	4.8	chr6	5051673	5052107	(165753872)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	3321428
5261	23.8	3.8	1.5	chr6	9851899	9854307	(160951672)	+	L1PA15-16	LINE/L1	1359	3620	(3295)	3328616
13958	17.4	6.0	1.3	chr6	12268327	12271972	(158534007)	C	L1M1	LINE/L1	(999)	6563	2740	3332427
1562	18.9	1.0	3.8	chr6	12348288	12348604	(158457375)	C	AluJo	SINE/Alu	(4)	308	1	3332550
292	30.0	13.0	7.8	chr6	12348656	12348872	(158457107)	+	L2b	LINE/L2	3145	3374	(1)	3332551
914	28.3	4.8	2.0	chr6	13212278	13212358	(157593621)	+	L2a	LINE/L2	2829	2909	(510)	3333881
233	16.7	9.4	0.0	chr6	13212567	13212614	(157593365)	+	MLT1A1	LTR/ERVL-MaLR	1	53	(355)	3333883
963	27.1	6.8	4.6	chr6	13212629	13213085	(157592894)	+	L2a	LINE/L2	2924	3391	(35)	3333881
7421	11.3	20.1	1.5	chr6	14017843	14019123	(156786856)	+	LTR12C	LTR/ERV1	1	1579	(0)	3335308
1239	25.0	5.2	2.7	chr6	14019152	14019488	(156786491)	C	MLT1A0	LTR/ERVL-MaLR	(15)	350	5	3335309
540	30.9	1.6	2.5	chr6	14019493	14019688	(156786291)	C	MLT1K	LTR/ERVL-MaLR	(40)	555	362	3335310
17805	17.4	2.8	1.9	chr6	15641232	15646258	(155159721)	+	L1PA17	LINE/L1	343	5162	(1753)	3338194
3178	19.5	4.9	1.9	chr6	16809597	16810746	(153995233)	C	L1MCa	LINE/L1	(4512)	2148	694	3340085
5530	19.9	3.0	1.4	chr6	18854755	18857811	(151948168)	C	L1PA17	LINE/L1	(2955)	3894	1000	3343679
13	23.6	4.8	3.0	chr6	20212577	20212639	(150593340)	+	(CCGGC)n	Simple_repeat	1	66	(0)	3345605
570	28.2	14.0	2.0	chr6	20787432	20787731	(150018248)	C	LTR82A	LTR/ERVL	(108)	764	423	3346617
379	22.9	8.6	0.0	chr6	20787842	20787937	(150018042)	+	Charlie10	DNA/hAT-Charlie	2718	2822	(0)	3346618
699	24.2	8.0	7.2	chr6	20787981	20788229	(150017750)	C	LTR82A	LTR/ERVL	(505)	367	117	3346617
14	0.0	8.3	0.0	chr6	21954477	21954500	(148851479)	+	(AGGC)n	Simple_repeat	1	26	(0)	3348607
1710	10.9	11.9	1.1	chr6	26104525	26104800	(144701179)	+	AluSz	SINE/Alu	2	311	(1)	3354639
379	25.5	11.7	3.6	chr6	26537048	26537250	(144268729)	+	L2a	LINE/L2	3181	3386	(1)	3355426
623	2.7	0.0	0.0	chr6	26743263	26743335	(144062644)	+	tRNA-Met	tRNA	1	73	(3)	3355770
2229	9.2	0.7	0.7	chr6	27672004	27672297	(143133682)	C	AluSz	SINE/Alu	(18)	294	1	3357340
692	6.0	0.0	0.0	chr6	27672448	27672531	(143133448)	C	tRNA-Ser-TCG	tRNA	(1)	84	1	3357341
4484	7.9	2.5	0.0	chr6	27792718	27793312	(143012667)	C	LTR71B	LTR/ERV1	(0)	610	1	3357601
2238	10.2	0.7	0.0	chr6	28946807	28947101	(141858878)	C	AluSp	SINE/Alu	(16)	297	1	3359521
190	35.1	3.4	7.3	chr6	28947102	28947170	(141858809)	C	MER5A	DNA/hAT-Charlie	(115)	74	5	3359520
13	6.7	9.1	2.8	chr6	33425720	33425752	(137380227)	+	GA-rich	Low_complexity	1	36	(0)	3366426
14	13.0	6.5	4.1	chr6	33425973	33426018	(137379961)	+	G-rich	Low_complexity	1	49	(0)	3366427
8884	13.6	3.4	4.9	chr6	37424575	37424944	(133381035)	C	L1M4c	LINE/L1	(4374)	3193	2844	3374662
2232	6.0	2.5	0.0	chr6	37424945	37425213	(133380766)	C	AluSq2	SINE/Alu	(9)	304	29	3374670
2210	15.7	0.3	0.0	chr6	39782127	39782471	(131023508)	C	Tigger3a	DNA/TcMar-Tigger	(1)	347	2	3378526
973	23.7	11.5	6.0	chr6	39782472	39782777	(131023202)	C	MLT1A0	LTR/ERVL-MaLR	(31)	334	3	3378525
297	27.1	3.3	3.3	chr6	40948565	40948686	(129857293)	+	MER5A	DNA/hAT-Charlie	35	156	(33)	3380361
293	24.1	2.2	16.4	chr6	40948687	40948718	(129857261)	C	MER5A1	DNA/hAT-Charlie	(18)	143	13	3380362
5340	8.0	1.0	0.3	chr6	40948967	40949659	(129856320)	+	MER4E1	LTR/ERV1	84	781	(0)	3380363
966	26.1	13.6	0.8	chr6	43526188	43526558	(127279421)	C	L2a	LINE/L2	(13)	3413	2988	3385504
2333	8.3	0.0	0.0	chr6	43720773	43721072	(127084907)	+	AluSx3	SINE/Alu	1	300	(11)	3385897
470	31.9	2.1	11.5	chr6	43721073	43721225	(127084754)	C	L2c	LINE/L2	(134)	3253	3106	3385896
1728	22.8	6.6	2.9	chr6	43721234	43721684	(127084295)	C	MLT1J	LTR/ERVL-MaLR	(7)	505	37	3385898
2147	23.9	1.4	6.5	chr6	45078379	45079025	(125726954)	C	L1M2	LINE/L1	(4170)	3396	2577	3388127
59	4.8	0.0	0.0	chr6	45422682	45422747	(125383232)	+	(CAG)n	Simple_repeat	1	66	(0)	3388618
39	4.6	0.0	0.0	chr6	45422750	45422794	(125383185)	+	(GGC)n	Simple_repeat	1	45	(0)	3388619
9894	21.4	5.2	1.8	chr6	48693861	48698690	(122107289)	+	L1P4a	LINE/L1	199	5367	(1306)	3393475
2298	9.7	0.3	0.0	chr6	49526134	49526423	(121279556)	+	AluSg	SINE/Alu	1	291	(19)	3394487
2003	14.6	0.3	0.7	chr6	53255328	53255628	(117550351)	C	AluJb	SINE/Alu	(10)	302	3	3399895
2944	1.3	0.0	0.0	chr6	56269374	56269683	(114536296)	+	AluYa5	SINE/Alu	1	310	(1)	3403964
11665	15.7	2.4	0.6	chr6	56269684	56270615	(114535364)	+	L1PA16	LINE/L1	2082	3022	(3461)	3403963
1652	25.4	10.9	1.4	chr6	56772764	56773269	(114032710)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3404596
75	1.2	4.7	0.0	chr6	71287908	71287992	(99517987)	+	(AGAAC)n	Simple_repeat	1	89	(0)	3420395
1097	7.8	0.7	0.7	chr6	71287993	71288003	(99517976)	+	AluSx	SINE/Alu	287	297	(15)	3420394
507	28.2	11.5	9.0	chr6	73339079	73339568	(97466411)	+	LTR78	LTR/ERV1	1	504	(800)	3423183
13913	22.9	5.5	3.0	chr6	76063938	76068510	(94737469)	+	L1PB4	LINE/L1	765	5323	(1592)	3427239
11442	26.4	6.9	3.4	chr6	76475975	76479546	(94326433)	+	L1PB2	LINE/L1	2	3553	(3293)	3427718
18777	16.7	4.5	2.8	chr6	77124438	77126872	(93679107)	+	L1PA16	LINE/L1	1005	3470	(3379)	3428441
1819	8.1	0.4	0.8	chr6	77368679	77368928	(93437051)	C	LTR1A2	LTR/ERV1	(46)	791	543	3428725
1830	14.6	4.7	0.6	chr6	77368942	77369265	(93436714)	C	LTR1A2	LTR/ERV1	(499)	338	1	3428725
8288	20.7	2.7	0.7	chr6	78743108	78745750	(92060229)	C	L1MA4A	LINE/L1	(3074)	4488	1787	3430355
1573	27.4	10.8	1.2	chr6	78821880	78822676	(91983303)	+	HAL1	LINE/L1	1069	1950	(557)	3430429
17	18.2	0.0	4.3	chr6	79077039	79077085	(91728894)	+	(CGAG)n	Simple_repeat	1	47	(0)	3430766
252	25.6	10.0	0.8	chr6	81246037	81246154	(89559825)	+	L1ME2	LINE/L1	3537	3666	(2480)	3433520
1536	20.9	0.9	0.9	chr6	81246178	81246506	(89559473)	C	L1PA15-16	LINE/L1	(4003)	2850	2522	3433522
3204	17.9	3.7	0.2	chr6	81246508	81247140	(89558839)	+	L1PB4	LINE/L1	5497	6152	(4)	3433523
1250	13.2	7.2	2.3	chr6	85435053	85435279	(85370700)	C	L1MA4	LINE/L1	(0)	6300	6059	3439056
4049	8.9	0.7	0.4	chr6	85435280	85435831	(85370148)	+	MER41A	LTR/ERV1	1	554	(0)	3439057
1250	13.2	7.2	2.3	chr6	85435832	85435867	(85370112)	C	L1MA4	LINE/L1	(242)	6058	6023	3439056
1138	31.1	5.3	7.0	chr6	85435868	85436364	(85369615)	+	Charlie24	DNA/hAT-Charlie	1011	1516	(934)	3439054
8737	1.5	0.0	0.0	chr6	85985705	85986769	(84819210)	+	L1PA2	LINE/L1	4311	5375	(771)	3439799
2296	26.9	5.7	0.8	chr6	85986793	85987772	(84818207)	C	L1M2	LINE/L1	(4241)	2608	1578	3439800
348	31.4	10.7	0.5	chr6	89434091	89434292	(81371687)	+	MIRb	SINE/MIR	2	226	(42)	3444763
12	19.5	7.1	3.3	chr6	96898960	96899015	(73906964)	+	(TAA)n	Simple_repeat	1	60	(0)	3454288
25	21.4	9.3	2.1	chr6	105402895	105403023	(65402956)	+	G-rich	Low_complexity	1	141	(0)	3465369
14	14.6	0.0	3.1	chr6	105403119	105403171	(65402808)	+	(CGG)n	Simple_repeat	1	51	(0)	3465370
2805	22.4	1.9	0.8	chr6	107404816	107405565	(63400414)	+	L1M2	LINE/L1	2133	2890	(3960)	3468796
15288	18.2	2.5	1.6	chr6	109211234	109213002	(61592977)	C	L1MA5	LINE/L1	(3184)	4378	2592	3471834
15623	17.9	3.4	1.4	chr6	109588368	109591845	(61214134)	C	L1PA11	LINE/L1	(774)	6075	2550	3472385
3594	10.2	0.4	0.6	chr6	109591846	109592359	(61213620)	C	MER75	DNA/PiggyBac	(0)	514	2	3472387
17351	16.0	2.5	2.0	chr6	110462247	110466911	(60339068)	+	L1PA17	LINE/L1	1719	6482	(377)	3473684
1932	19.6	4.6	4.9	chr6	111274141	111274825	(59531154)	C	L1M2	LINE/L1	(3629)	3930	2840	3475340
1674	17.6	5.3	1.4	chr6	111274907	111275195	(59530784)	C	AluJr	SINE/Alu	(0)	312	12	3475344
427	37.9	6.0	4.0	chr6	113122182	113122659	(57683320)	C	L2	LINE/L2	(1043)	2376	1889	3478002
5695	23.6	2.4	6.7	chr6	116606150	116607956	(54198023)	+	L1P4a	LINE/L1	1181	2977	(3958)	3482803
2204	11.4	0.0	1.3	chr6	116607957	116608254	(54197725)	+	AluSx3	SINE/Alu	1	294	(17)	3482805
32	26.9	0.0	3.7	chr6	116616035	116616141	(54189838)	+	(TCCC)n	Simple_repeat	1	107	(0)	3482821
17	8.2	3.9	0.0	chr6	116616124	116616149	(54189830)	+	(CA)n	Simple_repeat	1	27	(0)	3482822
14347	13.9	3.2	2.0	chr6	117346997	117351825	(53454154)	C	L1MC1	LINE/L1	(1430)	4891	1	3483757
13922	16.5	1.1	0.6	chr6	117845370	117848868	(52957111)	+	L1PA14	LINE/L1	2	3185	(3488)	3484396
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
254	22.4	0.0	0.0	chr6	120185902	120185950	(50620029)	C	L1MA7	LINE/L1	(3895)	3269	3221	3487509
2344	28.0	4.1	4.0	chr6	120185933	120186258	(50619721)	C	L1MA7	LINE/L1	(4180)	2988	2669	3487509
2303	21.3	7.2	1.2	chr6	121123299	121124142	(49681837)	C	L1M1	LINE/L1	(3554)	4008	3098	3488586
3399	25.7	4.7	2.2	chr6	121124157	121125273	(49680706)	C	L1M1	LINE/L1	(4542)	3023	1878	3488586
14455	15.9	2.1	1.4	chr6	121154810	121158822	(49647157)	C	L1P4a	LINE/L1	(1301)	5182	1139	3488612
15025	25.8	5.7	2.2	chr6	124677269	124678895	(46127084)	C	L1MB1	LINE/L1	(3925)	2713	1075	3493291
2398	9.2	0.0	0.0	chr6	125007975	125008268	(45797711)	+	AluY	SINE/Alu	1	294	(17)	3493706
1516	18.0	5.0	2.4	chr6	125008269	125008390	(45797589)	C	MER44A	DNA/TcMar-Tigger	(211)	128	1	3493705
16	0.0	0.0	0.0	chr6	125008739	125008756	(45797223)	+	(T)n	Simple_repeat	1	18	(0)	3493707
2034	20.1	4.4	0.0	chr6	125110884	125111292	(45694687)	+	MSTB1	LTR/ERVL-MaLR	5	432	(0)	3493867
4297	21.1	7.6	2.2	chr6	125111293	125111947	(45694032)	C	L1M2	LINE/L1	(4269)	3297	2574	3493864
596	34.3	13.6	2.9	chr6	125943031	125943301	(44862678)	C	L2	LINE/L2	(2479)	940	619	3495059
1782	14.1	0.4	0.0	chr6	125943302	125943550	(44862429)	+	AluSx	SINE/Alu	1	250	(62)	3495060
13656	18.7	6.3	1.3	chr6	126357907	126361291	(44444688)	C	L1P4a	LINE/L1	(1684)	4799	1120	3495571
14306	20.3	1.1	3.5	chr6	126586456	126590286	(44215693)	C	L1PB4	LINE/L1	(705)	6153	2422	3495818
708	14.2	0.0	0.0	chr6	126590287	126590392	(44215587)	C	U6	snRNA	(0)	107	2	3495820
11	28.1	0.0	5.3	chr6	127343105	127343161	(43462818)	+	(CCGCGGC)n	Simple_repeat	1	57	(0)	3496758
1416	16.3	5.9	0.6	chr6	127592874	127593152	(43212827)	C	MER61B	LTR/ERV1	(29)	398	22	3497099
555	16.7	1.9	1.9	chr6	127593137	127593240	(43212739)	C	MER61B	LTR/ERV1	(323)	104	1	3497099
5823	22.3	2.4	1.3	chr6	130296173	130298534	(40507445)	+	L1PA17	LINE/L1	288	2849	(4004)	3500737
8004	16.2	2.9	1.3	chr6	132393880	132396933	(38409046)	+	L1M2	LINE/L1	1775	4965	(2597)	3503784
1149	20.3	5.5	8.2	chr6	133060315	133060668	(37745311)	+	Tigger3a	DNA/TcMar-Tigger	3	346	(2)	3504740
30	3.4	0.0	0.0	chr6	133060671	133060700	(37745279)	+	(TG)n	Simple_repeat	1	30	(0)	3504741
2420	14.4	8.7	4.2	chr6	133060701	133061188	(37744791)	+	L1MA9	LINE/L1	5793	6311	(1)	3504739
3480	17.1	2.4	3.3	chr6	134714596	134715363	(36090616)	C	MER50	LTR/ERV1	(48)	734	2	3507353
2247	12.0	0.3	0.3	chr6	135340090	135340398	(35465581)	+	AluSx3	SINE/Alu	1	309	(2)	3508333
5992	18.1	7.1	5.9	chr6	135340399	135340640	(35465339)	+	L1MB7	LINE/L1	1930	2124	(5393)	3508331
5449	23.1	4.5	6.0	chr6	137588305	137592558	(33213421)	+	L1PB4	LINE/L1	190	4342	(2573)	3511670
4779	20.5	5.5	2.1	chr6	138176481	138177052	(32628927)	C	L1M2	LINE/L1	(4014)	2915	2323	3512576
2208	12.7	0.3	0.0	chr6	138549958	138550257	(32255722)	+	AluSx	SINE/Alu	1	301	(11)	3513140
14040	18.9	4.7	0.5	chr6	140129109	140132561	(30673418)	+	L1M2	LINE/L1	1997	5640	(1922)	3515700
6009	15.5	9.5	1.6	chr6	142206983	142207801	(28598178)	+	L1MA4	LINE/L1	1238	2134	(4431)	3518193
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
2641	17.0	7.4	0.6	chr6	144931223	144931726	(25874253)	C	MER66C	LTR/ERV1	(14)	541	1	3522081
16971	17.9	2.0	2.5	chr6	145508353	145512432	(25293547)	+	L1PA15-16	LINE/L1	1474	5518	(1331)	3522859
15809	22.8	5.2	1.9	chr6	146570267	146573205	(24232774)	+	L1MA3	LINE/L1	1107	3726	(3119)	3524216
688	25.1	4.5	1.6	chr6	148258335	148258555	(22547424)	C	MIR	SINE/MIR	(0)	262	34	3526572
22468	12.3	1.2	1.2	chr6	148583019	148587868	(22218111)	C	L1PA11	LINE/L1	(1127)	5334	543	3527150
15235	19.4	2.7	2.2	chr6	149096690	149100058	(21705921)	+	L1PB4	LINE/L1	585	3996	(3116)	3527911
1110	17.4	10.7	1.7	chr6	149138629	149138926	(21667053)	C	L1MB3	LINE/L1	(3)	6180	5853	3527961
696	26.5	7.8	0.0	chr6	149139017	149139230	(21666749)	+	MIR	SINE/MIR	23	255	(7)	3527962
1485	7.9	1.0	0.5	chr6	151561072	151561274	(19244705)	C	L1MA2	LINE/L1	(0)	6304	6101	3532254
5323	22.3	1.4	4.9	chr6	151561275	151562545	(19243434)	C	L1PA17	LINE/L1	(4072)	2847	1583	3532253
1553	16.0	5.7	1.1	chr6	154330326	154330621	(16475358)	C	AluJo	SINE/Alu	(0)	312	1	3536173
14236	15.4	2.7	1.9	chr6	154583821	154586810	(16219169)	C	L1M4c	LINE/L1	(3343)	3039	22	3536653
14701	17.6	3.2	2.9	chr6	155346695	155348127	(15457852)	C	L1PREC2	LINE/L1	(3760)	4381	2932	3538007
244	30.6	2.6	0.0	chr6	157614386	157614496	(13191483)	C	Charlie15a	DNA/hAT-Charlie	(23)	201	88	3541179
442	24.7	10.7	7.1	chr6	157614675	157614767	(13191212)	+	MER45A	DNA/hAT-Tip100	1	102	(76)	3541180
2209	12.6	0.7	0.0	chr6	157614768	157615068	(13190911)	C	AluSx1	SINE/Alu	(9)	303	1	3541181
2501	8.7	0.3	0.0	chr6	158577809	158578120	(12227859)	+	AluSp	SINE/Alu	1	313	(0)	3542773
10435	16.4	9.3	3.0	chr6	158578121	158578915	(12227064)	+	L1M4c	LINE/L1	1862	2809	(3835)	3542771
11933	18.8	1.6	2.2	chr6	159338039	159339846	(11466133)	+	L1MA4A	LINE/L1	1381	3179	(4387)	3543959
1953	16.1	0.0	0.3	chr6	159339847	159340138	(11465841)	+	AluSz	SINE/Alu	2	292	(20)	3543960
32	0.0	0.0	2.9	chr6	159340146	159340180	(11465799)	+	(AAAAC)n	Simple_repeat	1	35	(0)	3543961
17105	17.5	2.4	1.8	chr6	159340181	159341566	(11464413)	+	L1MA4A	LINE/L1	3182	4594	(2968)	3543959
7522	3.2	0.0	0.1	chr6	159402883	159403757	(11402222)	+	L1PA3	LINE/L1	5282	6155	(0)	3544023
22	0.0	0.0	0.0	chr6	159403778	159403801	(11402178)	+	(CA)n	Simple_repeat	1	24	(0)	3544024
5307	14.4	2.4	1.6	chr6	159856610	159857105	(10948874)	C	L1MA5	LINE/L1	(829)	5471	4971	3544718
5820	20.8	8.6	2.3	chr6	159857091	159858588	(10947391)	C	L1M2	LINE/L1	(4138)	2711	1111	3544722
25929	6.2	0.9	0.2	chr6	161172645	161178755	(9627224)	C	L1PA5	LINE/L1	(1)	6153	8	3546291
9716	17.9	4.1	1.0	chr6	164354841	164357792	(6448187)	C	L1PA16	LINE/L1	(1927)	4553	1499	3550672
1159	19.2	4.7	0.0	chr6	165403948	165404212	(5401767)	+	L1MA4	LINE/L1	6022	6299	(1)	3551896
326	27.7	3.5	4.2	chr6	169076599	169076741	(1729238)	+	LTR91	LTR/ERVL	12	153	(46)	3556113
2311	9.7	0.3	0.7	chr7	721365	721662	(158624311)	+	AluSp	SINE/Alu	1	297	(16)	3558800
2833	25.2	10.3	2.7	chr7	721663	722096	(158623877)	C	L1MDa	LINE/L1	(4603)	2030	1599	3558798
508	31.1	13.1	2.4	chr7	1097190	1098106	(158247867)	+	L1MC4	LINE/L1	6702	7777	(265)	3559258
252	29.7	0.0	7.5	chr7	1506915	1507034	(157838939)	C	L1MA10	LINE/L1	(0)	6334	6224	3559988
2396	6.8	0.0	2.9	chr7	1507198	1507506	(157838467)	C	AluY	SINE/Alu	(11)	300	1	3559989
244	29.7	7.6	4.8	chr7	1669460	1669625	(157676348)	+	MIR	SINE/MIR	22	192	(70)	3560286
1702	15.0	4.5	1.6	chr7	2462873	2463238	(156882735)	+	L1MB3	LINE/L1	5767	6143	(40)	3561464
1893	15.6	0.0	4.6	chr7	2463240	2463377	(156882596)	+	AluJo	SINE/Alu	2	132	(180)	3561465
3634	25.9	15.0	1.2	chr7	3399041	3400406	(155945567)	C	L1M4	LINE/L1	(5912)	1605	17	3563238
203	25.3	13.8	0.0	chr7	5077868	5077942	(154268031)	+	L2b	LINE/L2	3263	3349	(26)	3566175
16837	19.5	1.8	0.8	chr7	8312883	8314258	(151031715)	C	L1PA16	LINE/L1	(3964)	2955	1504	3572347
10514	22.0	3.7	3.2	chr7	11918340	11922319	(147423654)	+	L1M1	LINE/L1	2030	5739	(1823)	3576769
4411	19.1	4.7	3.9	chr7	13109208	13110437	(146235536)	C	MER52A	LTR/ERV1	(0)	1755	1	3578312
15809	15.4	3.7	1.2	chr7	15272133	15277026	(144068947)	C	L1PA5	LINE/L1	(0)	7322	2326	3581050
3949	23.5	7.2	3.5	chr7	15739062	15741195	(143604778)	+	L1MCa	LINE/L1	3	2381	(4279)	3581629
8797	12.0	1.8	1.8	chr7	19051916	19053707	(140292266)	+	L1PA15-16	LINE/L1	1446	3240	(3609)	3586071
654	33.8	11.3	4.8	chr7	20168338	20169320	(139176653)	C	L4_A_Mam	LINE/RTE-X	(151)	4839	3793	3587375
10620	20.8	3.8	4.6	chr7	20488498	20490054	(138855919)	+	L1M2	LINE/L1	2716	4246	(3316)	3587848
3515	26.2	2.9	1.9	chr7	22644912	22646775	(136699198)	C	L1MA9	LINE/L1	(4117)	3052	1548	3590990
2346	11.0	0.0	0.3	chr7	23742953	23743252	(135602721)	C	AluSx1	SINE/Alu	(12)	300	2	3592928
11160	19.2	3.3	2.1	chr7	23743253	23743911	(135602062)	C	L1M2	LINE/L1	(4190)	3019	2337	3592927
2540	10.1	2.7	2.7	chr7	26428681	26429055	(132916918)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3597030
1181	14.5	5.4	0.0	chr7	26429129	26429321	(132916652)	+	MER3	DNA/hAT-Charlie	1	204	(5)	3597031
16	0.0	0.0	0.0	chr7	26857155	26857171	(132488802)	+	(T)n	Simple_repeat	1	17	(0)	3597636
23	0.0	0.0	0.0	chr7	26857311	26857335	(132488638)	+	(A)n	Simple_repeat	1	25	(0)	3597637
1024	15.6	0.0	0.0	chr7	27435295	27435448	(131910525)	C	MER5A1	DNA/hAT-Charlie	(0)	166	13	3598496
283	27.9	5.9	1.8	chr7	27435474	27435586	(131910387)	C	MLT1K	LTR/ERVL-MaLR	(87)	523	406	3598497
386	32.2	5.7	3.2	chr7	27435702	27435922	(131910051)	C	MLT1K	LTR/ERVL-MaLR	(342)	253	27	3598497
14615	12.6	4.2	1.9	chr7	29905355	29907475	(129438498)	+	L1MB3	LINE/L1	18	2182	(4202)	3602314
13	8.5	4.0	0.0	chr7	31192746	31192770	(128153203)	+	(CATTT)n	Simple_repeat	1	26	(0)	3604276
10680	15.7	5.0	4.9	chr7	33614427	33616712	(125729261)	+	L1MCa	LINE/L1	15	2307	(4201)	3608112
3745	16.9	1.3	3.0	chr7	36392970	36393013	(122952960)	C	MER49	LTR/ERV1	(3)	920	876	3612226
2135	15.2	0.7	0.0	chr7	36393014	36393322	(122952651)	C	AluSz	SINE/Alu	(0)	312	2	3612227
5300	16.7	2.1	2.3	chr7	38404776	38406468	(120939505)	+	L1PA17	LINE/L1	2256	3941	(2908)	3615093
2416	28.8	4.7	3.9	chr7	39019038	39020045	(120325928)	C	HAL1ME	LINE/L1	(639)	1826	810	3615957
2400	9.9	0.0	1.3	chr7	44526742	44527055	(114818918)	+	AluSq2	SINE/Alu	1	310	(3)	3624351
8996	16.7	7.0	10.4	chr7	44527056	44527176	(114818797)	+	L1M4c	LINE/L1	1657	1767	(4617)	3624341
2431	7.7	0.7	1.3	chr7	44527177	44527486	(114818487)	+	AluSp	SINE/Alu	1	308	(5)	3624352
11552	18.0	2.7	0.6	chr7	45308397	45310354	(114035619)	C	L1M2	LINE/L1	(2875)	4687	2687	3625803
1245	13.2	13.6	0.4	chr7	48162527	48162755	(111183218)	C	MER21A	LTR/ERVL	(667)	264	1	3629567
1033	12.8	0.0	0.0	chr7	48162756	48162904	(111183069)	+	L1PA16	LINE/L1	2580	2728	(4125)	3629568
3319	10.6	11.1	1.1	chr7	48162906	48163432	(111182541)	C	LTR12	LTR/ERV1	(240)	586	1	3629569
14179	20.9	4.9	2.9	chr7	50632306	50635941	(108710032)	+	L1PB4	LINE/L1	610	4311	(2604)	3632606
30	26.1	2.4	4.0	chr7	50793486	50793608	(108552365)	+	(CGC)n	Simple_repeat	1	126	(0)	3632782
569	23.0	0.7	0.0	chr7	54978632	54978766	(104367207)	C	MER45A	DNA/hAT-Tip100	(0)	178	43	3638047
293	33.1	17.2	1.6	chr7	54978789	54979274	(104366699)	+	L2a	LINE/L2	1755	2331	(1088)	3638048
384	15.6	3.0	0.0	chr7	57489851	57489914	(101856059)	+	AluJo	SINE/Alu	225	290	(22)	3642536
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
84	11.5	0.0	0.0	chr7	65489745	65489886	(93856087)	+	(CCATT)n	Simple_repeat	1	142	(0)	3647902
248	24.4	15.5	5.9	chr7	65962442	65962559	(93383414)	C	MIRb	SINE/MIR	(37)	225	79	3648875
2202	10.0	1.0	0.0	chr7	65962592	65962882	(93383091)	+	AluSp	SINE/Alu	2	295	(18)	3648876
2249	12.3	0.0	0.0	chr7	66066564	66066872	(93279101)	+	AluSx1	SINE/Alu	2	310	(2)	3649141
5127	14.7	5.4	6.1	chr7	66066873	66067063	(93278910)	C	L1M4c	LINE/L1	(4510)	1874	1698	3649138
2425	7.4	0.7	0.0	chr7	66067064	66067360	(93278613)	C	AluSx1	SINE/Alu	(13)	299	1	3649142
28	2.6	5.1	0.0	chr7	69061740	69061778	(90284195)	+	(ATAGATATAG)n	Simple_repeat	1	41	(0)	3655841
2744	16.3	4.3	0.2	chr7	69061779	69062256	(90283717)	C	MLT2B4	LTR/ERVL	(56)	500	2	3655840
437	19.2	2.9	1.0	chr7	69062260	69062359	(90283614)	C	L1MD2	LINE/L1	(433)	5926	5825	3655842
17	0.0	0.0	0.0	chr7	70960893	70960911	(88385062)	+	(T)n	Simple_repeat	1	19	(0)	3659183
542	19.1	1.1	0.0	chr7	70960920	70961008	(88384965)	C	AluJb	SINE/Alu	(95)	217	128	3659184
504	27.4	5.8	3.2	chr7	70961101	70961292	(88384681)	+	L1MEf	LINE/L1	1478	1681	(4519)	3659185
1212	5.0	0.0	0.0	chr7	75528578	75528717	(83817256)	+	AluSc	SINE/Alu	2	141	(168)	3669849
1450	26.2	2.9	3.2	chr7	77718713	77719122	(81626851)	C	MLT1H1	LTR/ERVL-MaLR	(8)	547	139	3674356
16070	19.2	3.1	4.3	chr7	80561387	80566366	(78779607)	C	L1PA13	LINE/L1	(4)	4949	7	3678359
15680	25.0	4.6	3.2	chr7	81127572	81130212	(78215761)	C	L1PB4	LINE/L1	(3535)	3314	733	3679130
5654	12.1	3.5	4.9	chr7	82554625	82555266	(76790707)	+	L1PA15-16	LINE/L1	2240	2879	(3974)	3681087
1656	20.3	0.3	1.0	chr7	82555267	82555571	(76790402)	+	AluJo	SINE/Alu	9	311	(1)	3681088
7202	21.5	4.0	0.7	chr7	87764918	87768898	(71577075)	C	L1PA17	LINE/L1	(2610)	4971	1011	3687638
6509	10.6	1.5	3.4	chr7	87795896	87796610	(71549363)	+	L1MA2	LINE/L1	7028	7723	(0)	3687665
2837	14.7	6.2	0.8	chr7	87796615	87797148	(71548825)	+	L1M4c	LINE/L1	1543	2107	(4277)	3687668
6783	22.1	5.0	3.9	chr7	91720659	91722702	(67623271)	+	L1MA4	LINE/L1	921	3012	(4197)	3692805
15255	14.8	3.8	1.6	chr7	91722700	91724162	(67621811)	+	L1MA4	LINE/L1	3499	5000	(2205)	3692805
16036	20.1	3.2	1.8	chr7	91851256	91854449	(67491524)	+	L1PA17	LINE/L1	277	3315	(3534)	3692970
419	24.6	7.7	8.9	chr7	92736950	92737118	(66608855)	+	MIRb	SINE/MIR	44	218	(50)	3694358
418	29.4	11.9	3.7	chr7	95243641	95243865	(64102108)	+	MIRc	SINE/MIR	10	266	(2)	3697683
4018	15.6	4.1	3.3	chr7	98531095	98531639	(60814334)	C	MER4D	LTR/ERV1	(357)	546	1	3702822
1561	14.9	8.7	3.4	chr7	99616160	99616454	(59729519)	+	AluJr	SINE/Alu	1	312	(0)	3705100
218	12.8	0.0	0.0	chr7	99616469	99616507	(59729466)	+	L2c	LINE/L2	3122	3160	(227)	3705101
12	14.4	0.0	0.0	chr7	99616509	99616532	(59729441)	+	(ACAC)n	Simple_repeat	1	24	(0)	3705102
5267	22.7	15.9	6.5	chr7	115164833	115167773	(44178200)	C	L1PA15-16	LINE/L1	(1150)	5597	1986	3729342
13193	18.2	2.9	1.4	chr7	121247398	121249724	(38096249)	+	L1PA4	LINE/L1	6	2368	(4135)	3737445
24082	3.9	0.5	0.1	chr7	121249720	121253472	(38092501)	+	L1PA4	LINE/L1	2724	6489	(3)	3737445
5285	23.2	4.0	2.4	chr7	122868041	122870425	(36475548)	+	L1M3de	LINE/L1	1049	3157	(3688)	3739661
12953	18.2	7.8	0.8	chr7	123329817	123332293	(36013680)	+	L1MA4A	LINE/L1	2	2665	(4184)	3740278
6121	18.8	1.5	3.6	chr7	123332281	123332518	(36013455)	+	L1MA4A	LINE/L1	3346	3566	(3279)	3740278
1781	16.4	1.7	4.8	chr7	127575998	127576138	(31769835)	+	AluJo	SINE/Alu	1	144	(168)	3745943
2230	11.7	0.3	0.0	chr7	127576139	127576436	(31769537)	+	AluSz	SINE/Alu	1	299	(13)	3745944
6907	20.2	3.1	3.2	chr7	134465209	134466483	(24879490)	+	L1M2c	LINE/L1	2892	4179	(3383)	3757520
14184	16.6	4.5	1.1	chr7	135023194	135026244	(24319729)	+	L1P4a	LINE/L1	3	3164	(3319)	3758390
1481	19.7	0.3	7.4	chr7	135155547	135155855	(24190118)	+	AluJr4	SINE/Alu	1	287	(25)	3758525
6645	22.0	4.6	3.3	chr7	135155856	135156769	(24189204)	C	L1M2a1	LINE/L1	(4228)	2888	1967	3758524
263	25.0	3.0	0.0	chr7	135771722	135771785	(23574188)	C	MIR3	SINE/MIR	(22)	186	121	3759565
14854	19.9	3.3	1.8	chr7	136671593	136673182	(22672791)	C	L1MA5	LINE/L1	(3876)	3686	2074	3760919
641	24.0	10.7	0.8	chr7	139311400	139311634	(20034339)	+	MIRb	SINE/MIR	8	268	(0)	3765303
256	23.1	10.0	0.0	chr7	141551677	141551784	(17794189)	+	MIR3	SINE/MIR	27	146	(62)	3769473
570	34.8	11.7	3.5	chr7	141551907	141552392	(17793581)	+	L2b	LINE/L2	2407	2937	(482)	3769474
3480	30.0	8.9	3.5	chr7	145038570	145039544	(14306429)	+	HAL1	LINE/L1	1453	2496	(11)	3774095
17626	18.7	1.5	1.7	chr7	149316466	149318161	(10027812)	C	L1PA17	LINE/L1	(3707)	3208	1509	3780501
318	17.9	14.4	1.0	chr7	151513762	151513857	(7832116)	+	Charlie1a	DNA/hAT-Charlie	1086	1196	(259)	3783569
2848	18.6	6.2	0.2	chr7	151513858	151514466	(7831507)	+	L1MB8	LINE/L1	4593	5240	(906)	3783570
3147	15.7	2.8	6.5	chr7	151514467	151514764	(7831209)	+	L1MB8	LINE/L1	5441	5734	(444)	3783570
1106	24.4	11.7	1.3	chr7	151650543	151650933	(7695040)	+	Charlie1a	DNA/hAT-Charlie	2	438	(1017)	3783832
252	12.6	0.5	1.4	chr7	152712636	152713050	(6632923)	+	(CCCTC)n	Simple_repeat	1	417	(0)	3785820
868	22.6	0.0	4.3	chr7	152713055	152713240	(6632733)	C	AluJb	SINE/Alu	(0)	312	135	3785821
2291	12.0	0.7	0.0	chr7	152713248	152713555	(6632418)	C	AluSz	SINE/Alu	(2)	310	1	3785822
12145	18.8	2.4	3.0	chr7	153164398	153169048	(6176925)	C	L1PB4	LINE/L1	(327)	6532	1988	3786595
371	23.2	9.6	3.3	chr7	155124784	155124997	(4220976)	C	MLT1K	LTR/ERVL-MaLR	(330)	265	37	3789208
208	24.6	11.6	1.6	chr7	155125378	155125439	(4220534)	+	MamRTE1	LINE/RTE-BovB	1980	2048	(1764)	3789210
689	9.5	4.5	2.3	chr7	157656807	157658060	(1687913)	+	(AC)n	Simple_repeat	1	1310	(0)	3792649
557	29.4	5.0	0.8	chr7	157724229	157724478	(1621495)	+	Charlie21a	DNA/hAT-Charlie	615	875	(338)	3792699
1257	24.5	6.9	0.0	chr7	157724511	157724832	(1621141)	C	MER47A	DNA/TcMar-Tigger	(20)	346	1	3792700
11040	15.4	6.5	2.0	chr7	158117044	158118609	(1227364)	+	L1MB3	LINE/L1	838	2433	(3951)	3793005
19	32.9	0.0	0.0	chr7	158305367	158305435	(1040538)	+	GA-rich	Low_complexity	1	69	(0)	3793153
448	23.6	2.8	5.4	chr7	158305440	158305587	(1040386)	+	HAL1M8	LINE/L1	14	157	(2834)	3793154
7552	18.3	5.8	3.8	chr7	158305651	158306848	(1039125)	+	L1M4	LINE/L1	5	1201	(6316)	3793155
425	35.3	1.1	1.7	chr7	158535274	158535449	(810524)	+	MIRb	SINE/MIR	34	208	(60)	3793338
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
2947	11.9	1.1	0.7	chr8	653239	653668	(144484968)	+	MER57A1	LTR/ERV1	1	432	(0)	3795046
2508	23.2	4.1	2.2	chr8	653669	653860	(144484776)	+	L1MB3	LINE/L1	5792	5980	(203)	3795045
818	23.4	3.1	1.8	chr8	653870	654091	(144484545)	+	L1MB3	LINE/L1	5821	6045	(138)	3795047
5348	18.9	2.2	1.1	chr8	12782630	12783455	(132355181)	C	L1MA5	LINE/L1	(3359)	4203	3360	3811555
27	0.0	0.0	0.0	chr8	12783456	12783481	(132355155)	+	(T)n	Simple_repeat	1	26	(0)	3811558
5348	18.1	2.5	1.6	chr8	12783482	12784235	(132354401)	C	L1MA5	LINE/L1	(4207)	3359	2606	3811555
370	27.2	0.0	1.1	chr8	19055098	19055190	(126083446)	+	MLT1I	LTR/ERVL-MaLR	314	405	(6)	3820569
67	14.9	4.7	1.3	chr8	29516771	29516918	(115621718)	+	GA-rich	Low_complexity	1	155	(0)	3838059
16	16.8	0.0	0.0	chr8	29516899	29516926	(115621710)	+	A-rich	Low_complexity	1	28	(0)	3838060
6577	28.1	5.3	3.8	chr8	29909445	29912127	(115226509)	+	L1M2	LINE/L1	3	2728	(4121)	3838696
17263	8.7	0.9	0.2	chr8	29912142	29915423	(115223213)	+	L1PA8A	LINE/L1	2770	6073	(58)	3838697
12966	12.6	1.6	0.6	chr8	31510306	31513197	(113625439)	C	L1PA16	LINE/L1	(1862)	4987	2062	3841650
4404	19.7	3.5	1.3	chr8	36940194	36942348	(108196288)	+	L1MA5	LINE/L1	1672	3868	(2977)	3849604
703	24.6	14.2	9.4	chr8	37152878	37153290	(107985346)	C	LTR16	LTR/ERVL	(1)	437	2	3849907
1911	18.8	8.3	5.2	chr8	38012821	38013026	(107125610)	+	MER4-int	LTR/ERV1	1506	1707	(4891)	3851434
254	24.2	6.1	0.0	chr8	38012994	38013055	(107125581)	+	MER4-int	LTR/ERV1	2577	2642	(3689)	3851434
4437	7.8	1.8	5.1	chr8	38013084	38013774	(107124862)	C	LTR76	LTR/ERV1	(7)	668	1	3851437
2345	9.0	0.0	0.0	chr8	38013775	38014064	(107124572)	+	AluSx	SINE/Alu	19	308	(4)	3851438
44	3.5	0.0	0.0	chr8	38154458	38154507	(106984129)	+	(TTCC)n	Simple_repeat	1	50	(0)	3851759
72	4.1	0.0	0.0	chr8	38154508	38154584	(106984052)	+	(CCTC)n	Simple_repeat	1	77	(0)	3851760
2774	3.6	0.0	0.0	chr8	38361474	38361779	(106776857)	+	AluY	SINE/Alu	1	306	(5)	3852150
200	21.4	11.1	0.0	chr8	38362164	38362219	(106776417)	+	L2a	LINE/L2	3346	3408	(18)	3852151
16	5.2	0.0	0.0	chr8	38362254	38362273	(106776363)	+	(G)n	Simple_repeat	1	20	(0)	3852152
13	7.9	7.4	0.0	chr8	38466889	38466915	(106671721)	+	(CAC)n	Simple_repeat	1	29	(0)	3852333
14	7.8	0.0	6.5	chr8	38467396	38467426	(106671210)	+	(CCCAC)n	Simple_repeat	1	31	(0)	3852334
15	4.8	4.5	0.0	chr8	38467551	38467572	(106671064)	+	(AC)n	Simple_repeat	1	23	(0)	3852335
376	33.0	3.4	1.3	chr8	38626749	38626981	(106511655)	+	CR1-3_Croc	LINE/CR1	2740	2977	(628)	3852662
6779	21.1	5.0	0.9	chr8	39544803	39547944	(105590692)	C	L1PA16	LINE/L1	(2647)	5494	2330	3854001
12384	15.3	5.0	4.7	chr8	42827867	42829340	(102309296)	C	L1M4c	LINE/L1	(3940)	2444	953	3859588
3838	19.0	7.9	1.6	chr8	47054089	47055360	(98083276)	+	L1PA16	LINE/L1	6057	6851	(18)	3861416
4836	20.4	4.8	0.2	chr8	48484487	48485569	(96653067)	C	L1MB7	LINE/L1	(5201)	2316	1182	3863366
10010	18.3	4.0	4.0	chr8	49746814	49748256	(95390380)	+	L1M4c	LINE/L1	822	2270	(4114)	3864811
5084	14.3	4.3	1.1	chr8	51601088	51602462	(93536174)	C	L1PA16	LINE/L1	(3364)	3485	2063	3866986
3968	20.7	6.9	7.2	chr8	51766129	51768317	(93370319)	C	L1M4	LINE/L1	(5097)	2420	17	3867218
410	11.3	1.4	1.4	chr8	52501555	52501626	(92637010)	C	LTR43B	LTR/ERV1	(0)	765	694	3868228
963	21.1	2.8	0.8	chr8	52501710	52502000	(92636636)	C	LTR43B	LTR/ERV1	(97)	668	213	3868228
402	18.4	19.1	0.7	chr8	52587423	52587575	(92551061)	+	MER5A	DNA/hAT-Charlie	1	188	(1)	3868350
363	29.3	9.2	3.1	chr8	53878274	53878435	(91260201)	C	MIR3	SINE/MIR	(20)	188	16	3870060
12	26.9	0.0	5.5	chr8	53878783	53878837	(91259799)	+	G-rich	Low_complexity	1	55	(0)	3870061
615	22.8	4.0	0.0	chr8	53878931	53879075	(91259561)	C	MER5A1	DNA/hAT-Charlie	(15)	151	1	3870062
667	30.4	1.5	4.4	chr8	56709939	56710141	(88428495)	C	MIR	SINE/MIR	(60)	202	6	3874320
855	21.4	0.6	5.8	chr8	56710194	56710382	(88428254)	+	MER45C	DNA/hAT-Tip100	11	189	(764)	3874321
659	22.0	15.8	7.8	chr8	56710452	56710722	(88427914)	+	MER45C	DNA/hAT-Tip100	647	943	(10)	3874322
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
10037	22.5	3.1	2.6	chr8	58359464	58362183	(86776453)	+	L1MA6	LINE/L1	2016	4452	(3110)	3876477
19746	13.8	3.0	0.7	chr8	59224928	59229738	(85908898)	+	L1PA14	LINE/L1	561	5508	(2633)	3877638
12	13.7	0.0	0.0	chr8	66177114	66177137	(78961499)	+	(GCA)n	Simple_repeat	1	24	(0)	3886967
17	19.9	2.1	2.0	chr8	66177289	66177336	(78961300)	+	(CGGCTG)n	Simple_repeat	1	49	(0)	3886968
4851	14.8	10.8	5.3	chr8	68292309	68293507	(76845129)	+	MER52C	LTR/ERV1	1	1272	(6)	3890502
14690	20.1	2.5	1.1	chr8	72375157	72380202	(72758434)	+	L1PA15-16	LINE/L1	1593	6558	(367)	3896374
2505	14.6	0.7	1.6	chr8	75043616	75044047	(70094589)	+	L1PA15-16	LINE/L1	2367	2794	(4059)	3900462
7534	7.8	1.1	0.8	chr8	75056662	75057704	(70080932)	+	L1PA10	LINE/L1	1149	2194	(4159)	3900476
19	0.0	0.0	0.0	chr8	75057728	75057748	(70080888)	+	(A)n	Simple_repeat	1	21	(0)	3900477
8740	14.6	3.2	5.4	chr8	80014878	80016708	(65121928)	+	L1MCa	LINE/L1	84	1872	(4636)	3906874
11385	10.3	0.6	1.9	chr8	81165354	81167829	(63970807)	+	L1PA7	LINE/L1	6	2474	(4025)	3908910
18948	17.1	2.4	2.3	chr8	82447871	82452690	(62685946)	C	L1PA15	LINE/L1	(1414)	5352	448	3910675
1309	23.6	2.4	0.3	chr8	84572246	84572531	(60566105)	C	L1PA15-16	LINE/L1	(3947)	2906	2616	3913360
4843	21.7	1.7	1.0	chr8	88811278	88813131	(56325505)	+	L1PA17	LINE/L1	1062	2732	(4187)	3919072
22	0.0	0.0	0.0	chr8	88813159	88813182	(56325454)	+	(A)n	Simple_repeat	1	24	(0)	3919073
10706	18.2	1.2	3.0	chr8	88813183	88816108	(56322528)	+	L1PA17	LINE/L1	4018	6915	(20)	3919072
4679	22.7	4.9	2.7	chr8	89746065	89748267	(55390369)	+	L1M2	LINE/L1	1452	3522	(3323)	3920192
18	21.2	0.0	0.0	chr8	90082709	90082746	(55055890)	+	(GT)n	Simple_repeat	1	38	(0)	3920710
335	13.4	0.0	11.8	chr8	93754619	93754694	(51383942)	+	Tigger5b	DNA/TcMar-Tigger	401	467	(5)	3925741
978	8.7	0.0	0.0	chr8	93755205	93755319	(51383317)	C	AluSx	SINE/Alu	(197)	115	1	3925742
1127	23.7	13.1	2.4	chr8	94109505	94109802	(51028834)	C	MLT1F2	LTR/ERVL-MaLR	(221)	339	5	3926333
1510	23.2	12.0	3.7	chr8	95998656	95999619	(49139017)	+	L1MEc	LINE/L1	843	1897	(4503)	3929597
760	22.4	13.9	2.0	chr8	100906412	100906769	(44231867)	C	L1ME4b	LINE/L1	(253)	639	211	3937766
614	20.7	6.8	0.6	chr8	102755533	102755697	(42382939)	C	MER5B	DNA/hAT-Charlie	(0)	178	3	3941045
366	33.6	5.8	0.0	chr8	102755763	102755908	(42382728)	C	MIRb	SINE/MIR	(93)	175	21	3941046
17880	13.0	5.2	0.7	chr8	104841723	104846363	(40292273)	C	L1PA16	LINE/L1	(6)	6863	2033	3944350
20	28.3	3.6	1.2	chr8	106270272	106270354	(38868282)	+	(CGC)n	Simple_repeat	1	86	(0)	3946268
13	27.0	3.8	0.0	chr8	106270443	106270495	(38868141)	+	(GCGCCTG)n	Simple_repeat	1	55	(0)	3946269
6369	18.3	2.6	1.0	chr8	112077220	112080002	(33058634)	C	L1PB3	LINE/L1	(3286)	3629	719	3954327
2326	24.7	3.0	1.6	chr8	114057831	114059114	(31079522)	C	L1M2	LINE/L1	(3464)	3381	2075	3956886
15293	18.8	2.9	1.8	chr8	120786286	120790989	(24347647)	+	L1PB3	LINE/L1	713	5507	(1408)	3967180
234	13.5	0.0	0.0	chr8	122115690	122115726	(23022910)	+	tRNA-Tyr-TAT	tRNA	1	37	(39)	3969400
12521	19.0	3.0	3.1	chr8	122115734	122117819	(23020817)	+	L1PB4	LINE/L1	2543	4690	(2159)	3969401
233	33.1	12.3	0.6	chr8	133704119	133704276	(11434360)	+	L2c	LINE/L2	3193	3371	(16)	3991031
331	29.9	6.8	6.3	chr8	134583108	134583328	(10555308)	+	L2c	LINE/L2	3153	3387	(0)	3992530
214	30.2	5.0	2.0	chr8	134714336	134714433	(10424203)	+	L2c	LINE/L2	3253	3353	(34)	3992738
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
6145	12.7	3.6	5.1	chr8	143751666	143751954	(1386682)	C	L1M4c	LINE/L1	(4503)	1881	1587	4006607
2408	10.3	0.0	0.0	chr8	143751955	143752265	(1386371)	C	AluSx1	SINE/Alu	(1)	311	1	4006612
896	28.8	20.5	2.9	chr8	143962062	143962472	(1176164)	+	MLT1D	LTR/ERVL-MaLR	4	505	(0)	4006889
3556	24.1	3.2	6.9	chr8	143962484	143963674	(1174962)	+	MLT1D-int	LTR/ERVL-MaLR	15	1273	(98)	4006889
4401	18.2	3.4	12.3	chr8	144030659	144031453	(1107183)	C	L1MB7	LINE/L1	(4983)	2534	1758	4006988
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
2192	13.0	0.0	0.0	chr9	2973077	2973405	(135421312)	+	AluSz	SINE/Alu	4	312	(0)	4012934
4648	17.7	2.1	3.4	chr9	2973406	2973856	(135420861)	+	L1MB3	LINE/L1	1485	1924	(4460)	4012932
9546	16.8	5.7	8.9	chr9	4961373	4963269	(133431448)	C	L1MCa	LINE/L1	(4124)	1915	37	4015960
19912	12.6	2.4	0.8	chr9	5143959	5146332	(133248385)	C	L1PA13	LINE/L1	(2957)	3809	1378	4016160
548	26.3	10.0	3.9	chr9	5886405	5886610	(132508107)	C	MIR	SINE/MIR	(24)	238	19	4017194
11442	16.5	3.1	1.6	chr9	7431157	7434331	(130960386)	C	L1PA15-16	LINE/L1	(3366)	3483	714	4019719
23413	8.3	1.5	0.7	chr9	19851346	19856954	(118537763)	C	L1PA10	LINE/L1	(15)	6338	686	4036995
1024	20.8	7.1	5.5	chr9	23636894	23637183	(114757534)	C	Tigger9b	DNA/TcMar-Tigger	(0)	624	330	4042123
295	21.1	3.9	2.6	chr9	23637157	23637213	(114757504)	+	AluJb	SINE/Alu	224	282	(30)	4042124
34	0.0	0.0	0.0	chr9	23637214	23637245	(114757472)	+	(CAAC)n	Simple_repeat	1	32	(0)	4042125
295	21.1	3.9	2.6	chr9	23637246	23637263	(114757454)	+	AluJb	SINE/Alu	283	300	(12)	4042124
389	41.7	5.0	1.1	chr9	23637264	23637530	(114757187)	C	MamRTE1	LINE/RTE-BovB	(726)	3086	2809	4042126
17771	10.4	3.1	4.6	chr9	32519010	32520863	(105873854)	+	LOR1-int	LTR/ERV1	2397	4192	(3928)	4053789
740	18.0	4.5	0.0	chr9	35686529	35686656	(102708061)	+	FLAM_A	SINE/Alu	2	135	(7)	4059296
636	26.1	3.1	2.0	chr9	35686940	35687123	(102707594)	+	MIR	SINE/MIR	2	185	(83)	4059297
2694	21.7	3.9	5.0	chr9	38450267	38451851	(99942866)	C	L1MA6	LINE/L1	(3530)	4032	2452	4064631
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
13	18.9	2.8	0.0	chr9	62807627	62807662	(75587055)	+	(GGCCA)n	Simple_repeat	1	37	(0)	4073678
415	28.0	2.0	1.0	chr9	63817237	63817537	(74577180)	+	LSAU	Satellite	1	303	(172)	4074767
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
253	26.1	0.0	0.0	chr9	70038639	70038703	(68356014)	+	MER102a	DNA/hAT-Charlie	90	154	(176)	4082516
14141	19.0	3.1	2.0	chr9	73186180	73190188	(65204529)	+	L1M2	LINE/L1	2112	6168	(1037)	4087728
12874	18.4	3.3	5.0	chr9	77538374	77543885	(60850832)	C	L1MA4A	LINE/L1	(1441)	6121	718	4094430
25887	2.9	0.7	0.2	chr9	79177279	79183283	(59211434)	C	L1PA3	LINE/L1	(1)	6154	124	4096857
230	27.8	8.9	2.9	chr9	79224533	79224669	(59170048)	+	Charlie8	DNA/hAT-Charlie	86	231	(2197)	4096918
496	30.8	13.7	4.0	chr9	79597394	79597772	(58796945)	+	L2a	LINE/L2	2249	2670	(749)	4097485
3431	26.9	3.9	2.8	chr9	82434464	82435755	(55958962)	C	L1M2	LINE/L1	(3947)	3618	2289	4101473
2185	15.7	0.0	0.0	chr9	83546076	83546380	(54848337)	+	AluSz	SINE/Alu	2	306	(6)	4103077
5420	23.7	1.6	8.8	chr9	83546381	83546698	(54848019)	+	L1PA15-16	LINE/L1	2558	2877	(3976)	4103075
3452	25.5	2.9	3.6	chr9	87861379	87862650	(50532067)	C	L1M2	LINE/L1	(4152)	3414	2153	4110104
27	19.2	10.4	0.8	chr9	90642901	90643015	(47751702)	+	(CGCCCTG)n	Simple_repeat	1	127	(0)	4114122
6288	16.4	1.0	1.5	chr9	90884996	90886422	(47508295)	+	L1M2	LINE/L1	1556	2693	(4156)	4114415
12272	17.4	4.4	4.0	chr9	91199408	91202550	(47192167)	+	L1MB7	LINE/L1	204	3443	(3201)	4114859
1362	13.5	0.0	19.8	chr9	91399330	91399692	(46995025)	+	AluJb	SINE/Alu	1	291	(21)	4115159
3488	26.6	4.9	4.6	chr9	92101590	92102873	(46291844)	+	L1M2	LINE/L1	2298	3618	(3947)	4116198
4124	19.6	2.0	1.1	chr9	92991380	92992521	(45402196)	C	L1MA5A	LINE/L1	(3221)	4341	3217	4117514
2766	18.6	13.8	0.5	chr9	92992509	92993141	(45401576)	C	L1MA5A	LINE/L1	(6058)	1508	778	4117514
2859	24.5	3.6	2.0	chr9	93994900	93995644	(44399073)	C	LTR41B	LTR/ERVL	(0)	758	2	4118875
19329	21.4	4.4	2.6	chr9	94195402	94199254	(44195463)	C	L1PB3	LINE/L1	(3811)	3104	56	4119169
333	25.6	1.1	1.1	chr9	94914602	94914692	(43480025)	C	Charlie8	DNA/hAT-Charlie	(2255)	173	83	4120489
774	20.0	3.2	0.0	chr9	94914742	94914891	(43479826)	+	MER5A	DNA/hAT-Charlie	1	155	(34)	4120491
502	14.9	4.1	1.1	chr9	94914910	94915004	(43479713)	+	MER53	DNA/hAT	96	193	(0)	4120492
735	27.4	3.1	0.0	chr9	94915057	94915275	(43479442)	+	MIR	SINE/MIR	36	261	(1)	4120493
14	22.8	7.0	0.0	chr9	95510732	95510788	(42883929)	+	A-rich	Low_complexity	1	61	(0)	4121308
11	21.1	0.0	2.9	chr9	95510778	95510812	(42883905)	+	G-rich	Low_complexity	1	35	(0)	4121309
295	9.3	0.0	0.0	chr9	97519377	97519419	(40875298)	+	MER33	DNA/hAT-Charlie	75	117	(207)	4124635
232	32.2	9.6	6.2	chr9	98792103	98792486	(39602231)	+	L2b	LINE/L2	2972	3369	(6)	4127202
182	21.9	2.4	0.0	chr9	98916967	98917007	(39477710)	C	MIR3	SINE/MIR	(16)	192	151	4127494
15852	18.2	2.7	2.6	chr9	100189889	100190852	(38203865)	C	L1PB3	LINE/L1	(3480)	3435	2368	4129691
2054	15.8	1.0	0.0	chr9	100190853	100191156	(38203561)	C	AluJr	SINE/Alu	(4)	308	2	4129695
21	19.2	1.8	1.8	chr9	100427427	100427481	(37967236)	+	G-rich	Low_complexity	1	56	(0)	4130122
182	20.0	2.0	2.0	chr9	100427744	100427794	(37966923)	C	MIRb	SINE/MIR	(30)	238	188	4130123
15917	16.5	2.2	0.7	chr9	102110521	102113880	(36280837)	C	L1P4a	LINE/L1	(1756)	4858	1483	4132634
8752	6.5	0.6	16.8	chr9	102602679	102604330	(35790387)	C	SVA_B	Retroposon/SVA	(0)	1383	1	4133274
2795	14.2	0.2	4.7	chr9	102604331	102604700	(35790017)	C	L1PA13	LINE/L1	(4011)	2774	2418	4133273
13214	20.2	4.3	1.7	chr9	103771996	103776082	(34618635)	C	L1PB4	LINE/L1	(363)	7212	2999	4134797
2355	8.2	0.0	0.0	chr9	103776083	103776392	(34618325)	C	AluY	SINE/Alu	(0)	311	1	4134799
500	30.0	3.2	0.7	chr9	105700373	105700523	(32694194)	C	MIRb	SINE/MIR	(76)	192	38	4137942
227	26.6	8.4	2.7	chr9	105700624	105700735	(32693982)	C	L3	LINE/CR1	(2247)	1852	1734	4137943
292	19.1	12.7	0.0	chr9	105700817	105700918	(32693799)	C	L1ME3A	LINE/L1	(39)	6134	6015	4137944
7004	21.2	4.4	1.9	chr9	105733340	105735872	(32658845)	C	L1M2a	LINE/L1	(2381)	5178	2586	4137996
217	31.1	5.6	6.9	chr9	107884102	107884246	(30510471)	C	L2a	LINE/L2	(7)	3419	3277	4141793
3626	26.2	6.8	3.4	chr9	112478828	112479254	(25915463)	+	L1M3b	LINE/L1	2188	2608	(4241)	4149936
1865	20.2	2.2	3.8	chr9	112479312	112479682	(25915035)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	4149940
955	34.0	4.7	2.7	chr9	113062933	113063595	(25331122)	+	L1MA9	LINE/L1	5622	6298	(14)	4150944
915	26.8	11.2	3.6	chr9	113742721	113743391	(24651326)	+	L2a	LINE/L2	2654	3372	(54)	4152304
209	39.0	3.7	2.1	chr9	113743633	113743818	(24650899)	+	L3b	LINE/CR1	4383	4571	(661)	4152305
201	38.5	6.3	0.0	chr9	113743817	113743964	(24650753)	+	L3	LINE/CR1	3493	3650	(449)	4152306
194	33.3	2.8	1.4	chr9	116686928	116686997	(21707720)	C	MIR1_Amn	SINE/MIR	(80)	150	80	4157867
296	26.0	8.4	3.4	chr9	116687011	116687161	(21707556)	+	MIR3	SINE/MIR	23	175	(33)	4157868
306	35.6	4.2	1.2	chr9	120379550	120379711	(18015006)	+	MER5B	DNA/hAT-Charlie	7	173	(5)	4164923
449	24.4	6.2	2.2	chr9	120379728	120379865	(18014852)	+	MIR3	SINE/MIR	9	152	(56)	4164924
300	28.8	4.4	3.1	chr9	120379869	120380081	(18014636)	+	Charlie15b	DNA/hAT-Charlie	981	1059	(2)	4164925
17	14.9	2.0	5.9	chr9	121646487	121646536	(16748181)	+	(CCACC)n	Simple_repeat	1	51	(0)	4167454
11	16.4	5.9	0.0	chr9	121743413	121743446	(16651271)	+	(TTTTCGT)n	Simple_repeat	1	36	(0)	4167656
230	31.1	2.6	5.9	chr9	122465140	122465341	(15929376)	+	MER54B	LTR/ERVL	542	736	(57)	4169064
544	33.6	11.3	3.8	chr9	123453139	123453537	(14941180)	C	L2c	LINE/L2	(45)	3342	2910	4170721
573	25.0	2.6	3.4	chr9	124078936	124079176	(14315541)	+	MIR3	SINE/MIR	11	201	(7)	4171861
520	25.6	13.1	1.1	chr9	126788736	126788909	(11605808)	C	LTR33C	LTR/ERVL	(462)	201	4	4177058
229	27.5	10.0	5.6	chr9	126788910	126789071	(11605646)	+	L2b	LINE/L2	3032	3201	(174)	4177055
237	28.2	6.8	5.2	chr9	126789089	126789204	(11605513)	+	MER91B	DNA/hAT-Tip100	11	128	(62)	4177059
22	24.3	0.0	0.0	chr9	126789219	126789270	(11605447)	+	(TTCC)n	Simple_repeat	1	52	(0)	4177060
6101	19.2	15.9	1.9	chr9	129513812	129515315	(8879402)	+	MER52A	LTR/ERV1	1	1755	(0)	4183013
2075	19.0	6.7	6.5	chr9	130824036	130824554	(7570163)	C	MLT2B1	LTR/ERVL	(0)	520	1	4185880
375	29.9	2.8	1.4	chr9	131383043	131383181	(7011536)	+	L2c	LINE/L2	3026	3166	(221)	4186974
466	23.6	4.0	11.2	chr9	132268661	132268875	(6125842)	+	Charlie2b	DNA/hAT-Charlie	2577	2775	(7)	4188553
330	27.7	2.6	3.5	chr9	132269274	132269389	(6125328)	C	MIR	SINE/MIR	(0)	262	148	4188554
2295	11.2	0.0	0.0	chr9	132367292	132367595	(6027122)	+	AluSx1	SINE/Alu	1	304	(8)	4188758
382	23.3	7.7	4.0	chr9	132367908	132367994	(6026723)	+	FordPrefect_a	DNA/hAT-Tip100	52	143	(365)	4188759
962	27.3	5.1	10.2	chr9	132367995	132368639	(6026078)	C	PABL_B	LTR/ERV1	(0)	667	58	4188760
226	31.9	3.1	0.7	chr9	133509099	133509218	(4885499)	C	MIR1_Amn	SINE/MIR	(65)	203	82	4190701
259	34.3	1.0	1.0	chr9	134483495	134483594	(3911123)	+	MIRc	SINE/MIR	119	218	(50)	4192066
1397	24.9	2.9	0.9	chr9	135828745	135829219	(2565498)	+	L1M2	LINE/L1	1884	2690	(4159)	4193671
4360	23.0	10.0	3.2	chr9	135893810	135896730	(2497987)	+	L1MDb	LINE/L1	135	3258	(3279)	4193746
709	25.4	3.7	5.0	chr9	135984539	135984917	(2409800)	C	MLT1C	LTR/ERVL-MaLR	(16)	374	1	4193888
2093	10.6	0.3	0.7	chr9	135985031	135985314	(2409403)	+	AluSx	SINE/Alu	2	284	(28)	4193889
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
12283	19.0	3.4	1.9	chr9	138084979	138086360	(308357)	+	L1MA5	LINE/L1	2410	3784	(3778)	4196515
558	24.4	1.2	5.9	chrX	2991657	2991826	(153049069)	+	MER20	DNA/hAT-Charlie	16	177	(42)	4364008
4273	13.3	14.7	3.8	chrX	15105495	15106485	(140934410)	C	MER11B	LTR/ERVK	(11)	1225	1	4383778
5790	21.3	2.9	0.6	chrX	15106486	15108185	(140932710)	C	L1M3f	LINE/L1	(4574)	2991	1251	4383777
18691	14.8	2.7	1.4	chrX	18278179	18281429	(137759466)	+	L1PA16	LINE/L1	46	3833	(3082)	4389204
2336	10.5	0.0	0.0	chrX	24959184	24959478	(131081417)	+	AluSg	SINE/Alu	1	295	(15)	4400391
685	30.5	7.8	8.4	chrX	24959479	24959617	(131081278)	+	L2	LINE/L2	2618	2757	(662)	4400389
874	19.7	17.0	6.9	chrX	24959618	24959906	(131080989)	+	MER33	DNA/hAT-Charlie	1	324	(0)	4400392
685	30.5	7.8	8.4	chrX	24959907	24959980	(131080915)	+	L2	LINE/L2	2758	2817	(602)	4400389
12804	15.4	3.5	1.3	chrX	39083134	39085166	(116955729)	+	L1MB3	LINE/L1	551	2622	(3754)	4419985
522	22.7	18.3	3.9	chrX	40468143	40468385	(115572510)	C	MIRb	SINE/MIR	(0)	268	1	4422514
2066	11.2	4.2	3.1	chrX	40468682	40469030	(115571865)	+	L1MB3	LINE/L1	5812	6164	(19)	4422515
582	26.4	0.6	0.0	chrX	40530477	40530635	(115510260)	+	LTR16C	LTR/ERVL	330	489	(0)	4422640
791	28.8	5.0	6.4	chrX	40530649	40531071	(115509824)	C	L3b	LINE/CR1	(27)	5205	4789	4422646
5597	17.4	2.5	5.4	chrX	44203890	44206263	(111834632)	+	L1PA17	LINE/L1	1185	3460	(3113)	4428458
16181	14.6	3.3	4.9	chrX	46045776	46049091	(109991804)	+	L1MC1	LINE/L1	866	4262	(2059)	4431610
3962	9.5	7.3	2.2	chrX	46258271	46258853	(109782042)	+	MER41B	LTR/ERV1	1	615	(19)	4431857
3933	13.8	2.2	0.7	chrX	46258854	46259488	(109781407)	+	LTR9D	LTR/ERV1	2	645	(0)	4431858
188	22.5	4.8	0.0	chrX	47217597	47217636	(108823259)	+	L2a	LINE/L2	3367	3408	(18)	4433618
13	14.8	0.0	3.1	chrX	47233316	47233347	(108807548)	+	G-rich	Low_complexity	1	32	(0)	4433639
7420	15.4	5.8	2.9	chrX	51950694	51952544	(104088351)	+	L1MCa	LINE/L1	1	2096	(4412)	4441360
38	0.0	0.0	0.0	chrX	54712194	54712226	(101328669)	+	(TG)n	Simple_repeat	1	33	(0)	4446304
9228	18.7	5.0	1.4	chrX	55734262	55736385	(100304510)	C	L1PBa	LINE/L1	(2645)	4270	2058	4447451
216	38.9	0.0	2.4	chrX	64206326	64206491	(91834404)	C	MIR3	SINE/MIR	(32)	176	15	4451083
4509	20.9	5.6	2.1	chrX	68369648	68370011	(87670884)	+	L1M4	LINE/L1	1587	1978	(5642)	4456140
38	0.0	0.0	0.0	chrX	68370012	68370044	(87670851)	+	(AT)n	Simple_repeat	1	33	(0)	4456146
4509	20.9	5.6	2.1	chrX	68370045	68370214	(87670681)	+	L1M4	LINE/L1	1979	2145	(5475)	4456140
2264	12.3	0.0	3.2	chrX	68370215	68370522	(87670373)	+	AluSz	SINE/Alu	1	298	(14)	4456147
4509	20.9	5.6	2.1	chrX	68370523	68371106	(87669789)	+	L1M4	LINE/L1	2146	2750	(4870)	4456140
2244	9.8	0.7	0.3	chrX	71294637	71294932	(84745963)	+	AluSx	SINE/Alu	2	298	(14)	4461219
2290	12.1	0.0	0.0	chrX	73879643	73879948	(82160947)	C	AluSg	SINE/Alu	(4)	306	1	4464859
4725	17.6	8.2	11.5	chrX	73879949	73880573	(82160322)	+	L1PA15-16	LINE/L1	2888	3460	(3854)	4464853
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
2607	6.4	0.0	1.0	chrX	74051400	74051713	(81989182)	+	AluYm1	SINE/Alu	1	311	(0)	4465120
13715	17.4	1.7	0.6	chrX	74051714	74054521	(81986374)	+	L1PREC2	LINE/L1	3851	6687	(1454)	4465119
2445	8.5	0.3	0.0	chrX	74314475	74314779	(81726116)	C	AluSp	SINE/Alu	(7)	306	1	4465434
2061	13.2	0.0	1.0	chrX	74314978	74315273	(81725622)	+	AluJb	SINE/Alu	2	294	(18)	4465435
19603	16.2	2.1	2.7	chrX	76126476	76130360	(79910535)	+	L1PA11	LINE/L1	10	3892	(2569)	4467270
5181	20.5	2.2	1.5	chrX	76332027	76334094	(79706801)	+	L1PB4	LINE/L1	389	4154	(2695)	4467418
12931	17.8	1.5	1.6	chrX	85679653	85684089	(70356806)	C	L1MA4A	LINE/L1	(2761)	4088	1	4477239
8264	21.0	5.8	1.3	chrX	85842568	85843176	(70197719)	+	L1M2	LINE/L1	2842	3468	(4098)	4477368
79	3.7	0.0	0.0	chrX	85843182	85843264	(70197631)	+	(GGAA)n	Simple_repeat	1	83	(0)	4477371
9791	20.7	3.9	1.5	chrX	93018205	93022236	(63018659)	+	L1PA16	LINE/L1	828	4961	(3180)	4485181
22359	11.9	0.5	0.5	chrX	93493799	93495880	(62545015)	+	L1PA10	LINE/L1	498	2573	(3758)	4485684
1997	27.9	5.5	2.5	chrX	94523475	94524830	(61516065)	+	L1M4c	LINE/L1	1322	3150	(92)	4487036
2886	23.8	4.3	1.2	chrX	102681677	102683055	(53357840)	C	L1M2	LINE/L1	(4172)	3394	2097	4497503
2290	13.9	3.1	7.3	chrX	104309013	104309175	(51731720)	+	Tigger2a	DNA/TcMar-Tigger	259	423	(11)	4499947
10259	19.2	2.0	2.6	chrX	104922336	104926063	(51114832)	+	L1PA15-16	LINE/L1	1471	5130	(1785)	4500850
475	28.4	5.5	1.6	chrX	107000621	107000863	(49040032)	+	L1ME4a	LINE/L1	5714	5966	(158)	4503481
12	7.8	7.4	0.0	chrX	107484450	107484476	(48556419)	+	(CTCC)n	Simple_repeat	1	29	(0)	4504257
1779	20.0	4.7	2.3	chrX	110775579	110776383	(45264512)	C	L1MCa	LINE/L1	(3876)	2445	1584	4508881
974	20.7	3.5	0.0	chrX	110776376	110776597	(45264298)	C	L1MCa	LINE/L1	(4767)	1741	1512	4508881
1809	14.6	0.7	4.5	chrX	115689690	115689823	(40351072)	C	AluJr	SINE/Alu	(181)	131	2	4515986
2229	20.0	7.0	3.6	chrX	115689824	115690111	(40350784)	+	MER90a	LTR/ERV1	299	600	(14)	4515985
10981	18.3	4.8	2.4	chrX	121546549	121550943	(34489952)	+	L1PBb	LINE/L1	736	5261	(1654)	4524555
18359	15.7	3.9	1.1	chrX	121569706	121572818	(34468077)	+	L1MA3	LINE/L1	11	3214	(4351)	4524585
34	2.9	0.0	0.0	chrX	123657417	123657452	(32383443)	+	(TAAA)n	Simple_repeat	1	36	(0)	4527064
4581	13.5	6.0	1.6	chrX	123657453	123657960	(32382935)	+	L1ME1	LINE/L1	1385	1982	(4435)	4527063
17558	16.6	2.0	5.6	chrX	124589393	124592434	(31448461)	C	L1PA16	LINE/L1	(2467)	4382	1654	4528883
6878	21.2	4.7	4.3	chrX	126134334	126137815	(29903080)	C	L1PA17	LINE/L1	(8)	6585	1441	4530810
191	22.6	4.1	8.8	chrX	129940081	129940182	(26100713)	C	L3b	LINE/CR1	(382)	4850	4754	4535610
771	19.5	0.0	0.0	chrX	129940697	129940814	(26100081)	+	AluJr	SINE/Alu	1	118	(194)	4535611
20	0.0	0.0	0.0	chrX	129940822	129940843	(26100052)	+	(CA)n	Simple_repeat	1	22	(0)	4535612
542	27.3	4.6	5.8	chrX	129940937	129941125	(26099770)	+	MIR3	SINE/MIR	9	204	(4)	4535613
2797	11.9	3.0	0.9	chrX	141002791	141003240	(15037655)	C	LTR46	LTR/ERV1	(0)	460	1	4553136
4466	16.8	1.1	1.7	chrX	143890526	143891415	(12149480)	C	L1P4	LINE/L1	(800)	5346	4462	4557154
2934	23.9	1.9	2.9	chrX	143891414	143892651	(12148244)	+	L1PA15-16	LINE/L1	2576	4067	(2779)	4557155
1761	27.9	3.0	2.7	chrX	150324424	150324886	(5716009)	+	LTR16E1	LTR/ERVL	2	470	(68)	4565728
196	26.4	16.7	0.0	chrX	151082245	151082369	(4958526)	+	MIR3	SINE/MIR	40	189	(19)	4567087
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638