374	26.9	14.3	2.1	chr1	3601496	3601685	(245354737)	C	MER20	DNA/hAT-Charlie	(0)	219	3	4139
12	13.8	11.9	3.0	chr1	6199328	6199386	(242757036)	+	G-rich	Low_complexity	1	66	(0)	7812
485	26.5	15.9	5.2	chr1	7046939	7047280	(241909142)	+	MLT1I	LTR/ERVL-MaLR	29	407	(4)	9319
218	38.4	1.6	1.6	chr1	7047316	7047442	(241908980)	C	L2c	LINE/L2	(230)	3157	3031	9318
12	23.1	3.7	3.6	chr1	16613393	16613446	(232342976)	+	(CCGCGCC)n	Simple_repeat	1	56	(0)	27819
16	7.0	3.1	3.0	chr1	16613537	16613568	(232342854)	+	(CCTGCG)n	Simple_repeat	1	33	(0)	27820
2240	9.7	3.9	0.0	chr1	16624670	16624969	(232331453)	+	AluSz	SINE/Alu	1	312	(0)	27844
521	26.1	4.4	3.1	chr1	19865530	19865793	(229090629)	C	MLT1J1	LTR/ERVL-MaLR	(0)	444	53	34669
18	14.0	0.0	0.0	chr1	19865874	19865905	(229090517)	+	(ATC)n	Simple_repeat	1	32	(0)	34670
15	18.2	0.0	4.9	chr1	19882621	19882661	(229073761)	+	(GCG)n	Simple_repeat	1	41	(0)	34717
265	19.4	10.7	1.3	chr1	19882997	19883098	(229073324)	C	L2b	LINE/L2	(186)	3201	3083	34718
14	18.4	2.7	0.0	chr1	27392530	27392566	(221563856)	+	(GCCGC)n	Simple_repeat	1	38	(0)	51639
21	4.0	0.0	0.0	chr1	27496836	27496861	(221459561)	+	(TC)n	Simple_repeat	1	26	(0)	51876
211	24.0	0.0	0.0	chr1	27496959	27497013	(221459409)	+	L2a	LINE/L2	3036	3090	(285)	51877
296	31.8	13.0	1.9	chr1	31943970	31944126	(217012296)	+	MIRb	SINE/MIR	1	177	(91)	61669
328	23.1	2.9	12.4	chr1	34823501	34823653	(214132769)	+	MIRb	SINE/MIR	131	268	(0)	67475
971	27.4	11.2	5.0	chr1	34823667	34824085	(214132337)	+	MLT1J2	LTR/ERVL-MaLR	1	448	(0)	67476
306	27.1	7.6	6.1	chr1	35062671	35062851	(213893571)	C	MLT1N2	LTR/ERVL-MaLR	(14)	548	365	67948
673	21.8	7.0	6.3	chr1	35062889	35063122	(213893300)	C	MLT1J1	LTR/ERVL-MaLR	(4)	444	158	67949
1046	17.9	0.0	1.2	chr1	35063123	35063290	(213893132)	C	AluJr	SINE/Alu	(10)	302	137	67950
1722	17.9	2.3	1.3	chr1	35063295	35063601	(213892821)	C	AluJr	SINE/Alu	(1)	311	2	67951
31	0.0	0.0	0.0	chr1	35370339	35370367	(213586055)	+	(T)n	Simple_repeat	1	29	(0)	68660
21	10.8	0.0	0.0	chr1	35370720	35370749	(213585673)	+	(T)n	Simple_repeat	1	30	(0)	68661
252	36.2	11.2	3.7	chr1	37514970	37515379	(211441043)	+	L2	LINE/L2	2428	2872	(547)	72895
608	29.9	6.7	3.0	chr1	37515397	37515627	(211440795)	+	MIR	SINE/MIR	3	242	(20)	72896
15	29.0	1.3	3.9	chr1	39408603	39408678	(209547744)	+	G-rich	Low_complexity	1	77	(0)	76676
1897	14.5	4.0	1.0	chr1	40703208	40703497	(208252925)	+	AluJb	SINE/Alu	1	299	(13)	79359
379	29.5	3.9	6.0	chr1	40703498	40703625	(208252797)	+	MER102c	DNA/hAT-Charlie	132	256	(75)	79358
517	22.5	16.3	2.2	chr1	40703796	40704011	(208252411)	C	MIRb	SINE/MIR	(15)	253	12	79360
234	23.1	1.0	11.9	chr1	45339770	45339887	(203616535)	+	L2c	LINE/L2	3059	3163	(212)	87767
2366	4.4	2.1	0.0	chr1	46340062	46340361	(202616061)	C	AluYf1	SINE/Alu	(0)	311	1	89842
281	19.1	0.0	0.0	chr1	46340363	46340409	(202616013)	C	Arthur1C	DNA/hAT-Tip100	(316)	47	1	89843
294	31.4	12.4	5.5	chr1	46340413	46340614	(202615808)	+	L2b	LINE/L2	3009	3226	(149)	89844
859	28.7	10.0	4.4	chr1	52697872	52697999	(196258423)	+	L2a	LINE/L2	3247	3371	(55)	101487
13	8.1	3.9	0.0	chr1	52698361	52698386	(196258036)	+	(GGCGG)n	Simple_repeat	1	27	(0)	101495
19	6.2	0.0	7.5	chr1	53945826	53945865	(195010557)	+	(GCCCC)n	Simple_repeat	1	40	(0)	104098
331	26.5	20.9	0.0	chr1	54973101	54973251	(193983171)	C	MIR3	SINE/MIR	(12)	196	6	106256
1246	28.7	8.6	2.9	chr1	55422058	55422473	(193533949)	+	MLT1J1	LTR/ERVL-MaLR	3	444	(0)	107078
202	33.9	3.8	1.6	chr1	56578168	56578296	(192378126)	+	MIRb	SINE/MIR	117	248	(20)	109119
214	16.7	6.7	0.0	chr1	56578267	56578308	(192378114)	+	L2c	LINE/L2	3334	3378	(9)	109120
21	3.5	0.0	0.0	chr1	56578777	56578805	(192377617)	+	(CGGCG)n	Simple_repeat	1	29	(0)	109121
1614	26.6	3.5	1.0	chr1	63697245	63697632	(185258790)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	51	122521
225	23.7	10.6	9.5	chr1	63697635	63697718	(185258704)	+	L2b	LINE/L2	3287	3371	(4)	122522
192	21.9	0.0	2.4	chr1	63897592	63897633	(185058789)	C	L2a	LINE/L2	(9)	3417	3377	122906
480	24.6	7.3	0.0	chr1	63897633	63897746	(185058676)	+	L2a	LINE/L2	3299	3421	(5)	122907
809	26.0	7.0	1.7	chr1	63897758	63897988	(185058434)	C	MLT1J1	LTR/ERVL-MaLR	(2)	442	199	122908
377	26.2	3.9	2.4	chr1	63898185	63898309	(185058113)	+	L2c	LINE/L2	3253	3379	(8)	122909
17	7.9	0.0	0.0	chr1	65147483	65147509	(183808913)	+	(GGAGT)n	Simple_repeat	1	27	(0)	125211
375	23.8	6.1	0.0	chr1	67634276	67634380	(181322042)	+	MIRc	SINE/MIR	45	155	(113)	129304
30	0.0	0.0	0.0	chr1	67634955	67635004	(181321418)	+	(GT)n	Simple_repeat	1	50	(0)	129305
15	25.6	0.0	0.0	chr1	70221199	70221232	(178735190)	+	GA-rich	Low_complexity	1	34	(0)	133041
22	11.7	1.9	5.7	chr1	70221460	70221511	(178734911)	+	(GCG)n	Simple_repeat	1	53	(0)	133042
20	22.2	0.0	0.0	chr1	70221683	70221729	(178734693)	+	(GCG)n	Simple_repeat	1	47	(0)	133043
644	25.1	1.8	0.0	chr1	74733574	74733736	(174222686)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	139079
5735	18.5	7.6	2.5	chr1	77596253	77598044	(171358378)	+	L1MC3	LINE/L1	5887	7860	(22)	143163
971	22.6	8.5	6.7	chr1	80991016	80991371	(167965051)	+	MLT1J1	LTR/ERVL-MaLR	21	383	(61)	147840
278	22.2	4.0	0.0	chr1	85521521	85521592	(163434830)	+	Chap1_Mam	DNA/hAT-Charlie	13	87	(255)	154290
441	34.2	7.7	8.0	chr1	85521596	85521965	(163434457)	+	L2c	LINE/L2	3003	3387	(0)	154291
1247	15.8	0.0	0.6	chr1	93330050	93330232	(155626190)	C	AluJr	SINE/Alu	(129)	183	2	166125
262	26.0	6.1	0.0	chr1	93330332	93330408	(155626014)	+	MLT1J2	LTR/ERVL-MaLR	244	325	(123)	166126
324	37.1	5.7	2.8	chr1	93330587	93330908	(155625514)	C	Mam_R4	LINE/Dong-R4	(576)	3233	2902	166127
907	30.8	5.7	2.5	chr1	93716516	93716908	(155239514)	C	LTR16C	LTR/ERVL	(0)	489	84	166735
1692	22.8	9.7	0.9	chr1	93716961	93717394	(155239028)	+	MLT1H	LTR/ERVL-MaLR	71	546	(3)	166736
2118	10.5	2.2	6.2	chr1	94046161	94046485	(154909937)	+	AluSx	SINE/Alu	1	312	(0)	167205
920	15.4	7.8	1.3	chr1	100895397	100895552	(148060870)	+	AluJb	SINE/Alu	137	303	(9)	177179
632	27.9	14.1	6.4	chr1	111754741	111755081	(137201341)	C	L2a	LINE/L2	(2)	3424	3064	192020
209	27.7	6.7	0.0	chr1	111755063	111755145	(137201277)	C	L2a	LINE/L2	(941)	2478	2390	192020
18	9.4	0.0	5.3	chr1	111755146	111755183	(137201239)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	192021
292	29.2	1.4	0.0	chr1	111755188	111755259	(137201163)	C	L2a	LINE/L2	(1018)	2401	2329	192020
15	26.3	0.0	0.0	chr1	112956340	112956376	(136000046)	+	(CG)n	Simple_repeat	1	37	(0)	194126
320	26.3	7.7	0.7	chr1	112956706	112956908	(135999514)	+	MIR	SINE/MIR	17	237	(31)	194127
13	11.6	2.2	8.7	chr1	113390176	113390220	(135566202)	+	(CCCCT)n	Simple_repeat	1	46	(0)	194976
15	26.0	3.3	1.6	chr1	115641931	115641991	(133314431)	+	(GGCAGC)n	Simple_repeat	1	63	(0)	198481
13	4.8	4.5	0.0	chr1	115641973	115641994	(133314428)	+	(GCG)n	Simple_repeat	1	23	(0)	198482
13	22.3	4.3	5.5	chr1	115642016	115642085	(133314337)	+	(CGCGGAC)n	Simple_repeat	1	73	(0)	198483
30	4.8	5.7	4.0	chr1	125151026	125151095	(123805327)	+	(GATTCCATTC)n	Simple_repeat	1	74	(0)	207451
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
449	35.1	6.0	6.6	chr1	145541050	145541351	(103415071)	C	L2c	LINE/L2	(0)	3387	3088	211139
285	23.6	4.0	0.0	chr1	145541423	145541494	(103414928)	C	Chap1_Mam	DNA/hAT-Charlie	(255)	87	13	211140
952	28.2	5.5	7.2	chr1	150604929	150605065	(98351357)	C	LTR78	LTR/ERV1	(904)	400	269	219439
12	13.9	11.9	3.0	chr1	152048316	152048374	(96908048)	+	(GGCTGT)n	Simple_repeat	1	66	(0)	222321
12	17.5	3.1	0.0	chr1	153958498	153958529	(94997893)	+	(CTCC)n	Simple_repeat	1	33	(0)	225133
16	24.8	0.0	3.6	chr1	153958537	153958592	(94997830)	+	(GCCGCC)n	Simple_repeat	1	56	(0)	225134
27	5.6	0.0	2.6	chr1	155562800	155562838	(93393584)	+	(CCT)n	Simple_repeat	1	39	(0)	228301
18	31.1	1.2	2.3	chr1	155562840	155562848	(93393574)	+	(CCCCCG)n	Simple_repeat	1	22	(65)	228302
23	17.6	0.0	3.6	chr1	155562849	155562903	(93393519)	+	(CCG)n	Simple_repeat	1	55	(0)	228303
18	31.1	1.2	2.3	chr1	155562904	155562925	(93393497)	+	(CCCCCG)n	Simple_repeat	23	87	(0)	228302
459	23.5	7.1	11.4	chr1	156516859	156517154	(92439268)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	169	230269
2394	10.1	0.3	0.0	chr1	156517157	156517462	(92438960)	C	AluSq2	SINE/Alu	(6)	307	1	230270
13	21.9	1.9	5.6	chr1	159945550	159945602	(89010820)	+	(CTCCG)n	Simple_repeat	1	54	(0)	234978
697	32.7	6.7	2.8	chr1	164432580	164432968	(84523454)	+	MLT1J2	LTR/ERVL-MaLR	59	446	(2)	242087
501	32.3	6.0	0.5	chr1	164432987	164433176	(84523246)	C	L3	LINE/CR1	(107)	3992	3792	242088
12	15.1	0.0	9.1	chr1	165630442	165630485	(83325937)	+	(CCCCCG)n	Simple_repeat	1	44	(0)	243993
2168	23.9	7.9	1.1	chr1	172653016	172653535	(76302887)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	1	254518
30	0.0	0.0	0.0	chr1	179002439	179002466	(69953956)	+	(AAAACA)n	Simple_repeat	1	28	(0)	263973
27	24.7	2.5	4.9	chr1	179229712	179229831	(69726591)	+	(CCCGCCC)n	Simple_repeat	1	123	(0)	264401
2123	12.7	0.0	1.9	chr1	179877259	179877566	(69078856)	+	AluJr	SINE/Alu	1	302	(10)	265459
13	18.3	0.0	3.0	chr1	185734404	185734436	(63221986)	+	(GGC)n	Simple_repeat	1	33	(0)	274707
468	28.8	9.7	9.7	chr1	196206833	196207163	(52749259)	C	MLT1I	LTR/ERVL-MaLR	(10)	401	71	288361
2376	11.3	0.0	0.0	chr1	200510993	200511302	(48445120)	+	AluSq2	SINE/Alu	3	312	(1)	294414
1582	22.9	11.9	0.8	chr1	200511318	200511713	(48444709)	+	MLT1J2	LTR/ERVL-MaLR	1	446	(2)	294415
2513	8.4	0.0	0.0	chr1	200511750	200512060	(48444362)	+	AluY	SINE/Alu	1	311	(0)	294416
1081	24.1	3.9	7.8	chr1	202991527	202991873	(45964549)	+	MLT1I	LTR/ERVL-MaLR	73	405	(6)	298874
251	26.6	5.8	2.2	chr1	203267177	203267329	(45689093)	C	L1MC4	LINE/L1	(630)	1859	1692	299310
518	21.7	6.2	0.0	chr1	203267392	203267511	(45688911)	+	LTR41B	LTR/ERVL	69	196	(505)	299315
17	17.3	5.3	4.2	chr1	206556820	206556878	(42399544)	+	G-rich	Low_complexity	1	59	(0)	305297
1033	19.5	13.3	2.4	chr1	206864613	206864906	(42091516)	+	MER96B	DNA/hAT-Tip100	85	415	(2)	305828
687	24.9	7.1	4.9	chr1	213014842	213015145	(35941277)	+	MER113A	DNA/hAT-Charlie	3	313	(1)	315576
12	25.3	1.6	6.2	chr1	213015515	213015577	(35940845)	+	(GCCC)n	Simple_repeat	1	64	(0)	315577
21	7.7	0.0	0.0	chr1	213987549	213987576	(34968846)	+	(A)n	Simple_repeat	1	28	(0)	317037
22	15.2	0.0	2.2	chr1	213987703	213987748	(34968674)	+	G-rich	Low_complexity	1	46	(0)	317038
61	25.9	3.3	2.3	chr1	213988061	213988073	(34968349)	+	(CTCTT)n	Simple_repeat	1	33	(186)	317039
24	22.4	8.4	3.5	chr1	213988074	213988204	(34968218)	+	(TCT)n	Simple_repeat	1	142	(0)	317040
61	25.9	3.3	2.3	chr1	213988205	213988272	(34968150)	+	(CTCTT)n	Simple_repeat	34	219	(0)	317039
229	34.6	3.0	4.7	chr1	223738574	223738743	(25217679)	C	L4_B_Mam	LINE/RTE-X	(1897)	3044	2878	331140
276	26.3	8.1	0.0	chr1	223738950	223739063	(25217359)	C	LTR33	LTR/ERVL	(390)	125	2	331141
773	31.1	13.5	4.6	chr1	223739071	223739182	(25217240)	C	L4_B_Mam	LINE/RTE-X	(3026)	1915	1799	331140
17	19.6	6.7	3.8	chr1	223845956	223846030	(25110392)	+	(CCGCG)n	Simple_repeat	1	80	(0)	331314
326	17.7	0.0	0.0	chr1	223846635	223846696	(25109726)	+	L1MB4	LINE/L1	6118	6179	(1)	331315
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
14	35.6	0.0	0.0	chr1	224506251	224506287	(24450135)	+	(ACACAC)n	Simple_repeat	1	54	(0)	332686
18	12.1	0.0	0.0	chr1	224506261	224506288	(24450134)	+	(GC)n	Simple_repeat	1	28	(0)	332687
15	0.0	0.0	0.0	chr1	224506288	224506304	(24450118)	+	(CA)n	Simple_repeat	1	17	(0)	332688
12	8.1	3.6	3.5	chr1	225652654	225652681	(23303741)	+	(CCCGC)n	Simple_repeat	1	29	(0)	334306
14	22.2	0.0	2.6	chr1	225652948	225652986	(23303436)	+	(CCT)n	Simple_repeat	1	39	(0)	334307
1811	17.3	0.7	2.0	chr1	226096587	226096887	(22859535)	+	AluJr	SINE/Alu	2	298	(14)	335199
629	26.8	8.2	6.5	chr1	226097056	226097318	(22859104)	C	MLT1I	LTR/ERVL-MaLR	(2)	409	142	335200
3477	15.2	14.8	3.1	chr1	226097330	226097526	(22858896)	C	MER4CL34	LTR/ERV1	(0)	765	588	335201
1309	15.1	2.1	15.7	chr1	226108908	226109078	(22847344)	C	AluJr	SINE/Alu	(183)	129	10	335231
1124	22.8	16.5	4.3	chr1	226109093	226109510	(22846912)	+	L2a	LINE/L2	2948	3426	(0)	335221
385	32.8	10.3	7.4	chr1	227046270	227046690	(21909732)	C	HAL1	LINE/L1	(1783)	724	290	336845
19	21.8	5.6	1.3	chr1	227318062	227318132	(21638290)	+	(GCCGC)n	Simple_repeat	1	75	(0)	337281
13	21.7	0.0	0.0	chr1	227318187	227318218	(21638204)	+	(GCG)n	Simple_repeat	1	32	(0)	337282
13	29.9	2.0	0.0	chr1	227318360	227318409	(21638013)	+	(CCTCT)n	Simple_repeat	1	51	(0)	337283
22	24.8	1.3	2.6	chr1	227318505	227318579	(21637843)	+	(CCCCCG)n	Simple_repeat	1	76	(0)	337284
469	27.6	2.6	1.1	chr1	228319299	228320321	(20636101)	+	(CATC)n	Simple_repeat	1	1038	(0)	338547
22	19.8	3.5	0.0	chr1	228487322	228487379	(20469043)	+	(TCCCCG)n	Simple_repeat	1	60	(0)	338797
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
563	22.5	0.0	1.6	chr1	228647911	228648032	(20308390)	C	5S	rRNA	(1)	120	1	338982
15	21.3	9.3	0.0	chr1	228735308	228735361	(20221061)	+	(CG)n	Simple_repeat	1	59	(0)	339120
18	10.0	0.0	2.9	chr1	228735416	228735449	(20220973)	+	(CCCG)n	Simple_repeat	1	34	(0)	339121
639	25.3	1.7	3.4	chr1	229757071	229757246	(19199176)	C	MLT1J2	LTR/ERVL-MaLR	(5)	443	271	340847
1000	24.4	13.9	3.0	chr1	229757264	229757596	(19198826)	C	MLT1J2	LTR/ERVL-MaLR	(58)	390	16	340848
1068	30.9	0.8	2.8	chr1	229757616	229758002	(19198420)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	134	340849
15	9.9	0.0	7.9	chr1	230754112	230754149	(18202273)	+	G-rich	Low_complexity	1	38	(0)	342359
12	17.9	3.1	0.0	chr1	231039984	231040015	(17916407)	+	(CGCCCG)n	Simple_repeat	1	33	(0)	342810
474	26.9	8.6	0.0	chr1	234125238	234125408	(14831014)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	225	347395
247	21.3	0.0	0.0	chr1	234125402	234125448	(14830974)	C	MLT1I	LTR/ERVL-MaLR	(279)	132	86	347395
196	28.4	1.6	12.8	chr1	234125946	234126086	(14830336)	+	MIR	SINE/MIR	67	191	(71)	347396
12	19.3	0.0	5.1	chr1	234600126	234600164	(14356258)	+	G-rich	Low_complexity	1	39	(0)	348157
37	15.3	0.0	1.4	chr1	234600189	234600258	(14356164)	+	(GCCCC)n	Simple_repeat	1	70	(0)	348158
958	15.8	0.6	1.8	chr1	236063641	236063804	(12892618)	+	FRAM	SINE/Alu	1	162	(14)	350911
284	14.6	3.5	0.0	chr1	236063806	236063860	(12892562)	+	Charlie4a	DNA/hAT-Charlie	430	486	(22)	350912
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
1644	24.8	8.3	1.1	chr10	610024	610589	(133186833)	+	L1MA4	LINE/L1	5690	6300	(0)	371680
439	32.4	8.6	4.4	chr10	2872396	2872982	(130924440)	C	L2a	LINE/L2	(1)	3425	2817	374296
2222	9.2	4.2	0.0	chr10	6303534	6303828	(127493594)	+	AluSg	SINE/Alu	2	309	(1)	379282
335	29.5	14.0	2.1	chr10	6303858	6304051	(127493371)	+	MLT1J2	LTR/ERVL-MaLR	111	331	(117)	379283
2081	6.1	0.0	0.0	chr10	7311977	7312238	(126485184)	+	L1PA5	LINE/L1	5892	6153	(1)	380817
170	17.8	0.0	0.0	chr10	7722947	7723256	(126074166)	+	(GAGTG)n	Simple_repeat	1	310	(0)	381495
12	21.1	2.5	2.4	chr10	7723283	7723322	(126074100)	+	GA-rich	Low_complexity	1	41	(0)	381496
239	28.9	12.3	3.6	chr10	13055913	13056052	(120741370)	+	LTR91	LTR/ERVL	24	177	(22)	390025
1166	26.5	9.4	1.4	chr10	13056088	13056447	(120740975)	C	MLT1J1	LTR/ERVL-MaLR	(44)	400	9	390026
316	14.1	9.6	2.7	chr10	14385196	14385333	(119412089)	+	MLT1J2	LTR/ERVL-MaLR	1	147	(365)	392365
376	23.7	5.9	8.1	chr10	14385407	14385621	(119411801)	+	MLT1J2	LTR/ERVL-MaLR	236	447	(1)	392365
230	33.0	9.6	3.0	chr10	14385631	14385880	(119411542)	+	L2b	LINE/L2	3144	3426	(0)	392364
17	4.3	0.0	0.0	chr10	21506632	21506655	(112290767)	+	(GTTT)n	Simple_repeat	1	24	(0)	403847
242	25.7	0.0	0.0	chr10	23039996	23040069	(110757353)	+	L1ME3G	LINE/L1	1	74	(850)	406164
365	24.2	10.5	4.9	chr10	23040094	23040275	(110757147)	C	MLT1J1	LTR/ERVL-MaLR	(33)	415	203	406165
15	25.6	0.0	0.0	chr10	25175005	25175046	(108622376)	+	(AGC)n	Simple_repeat	1	42	(0)	409842
578	17.2	0.3	2.2	chr10	29927416	29927546	(103869876)	C	L1PA16	LINE/L1	(122)	6034	5913	417731
375	26.6	2.7	2.7	chr10	29927554	29927665	(103869757)	+	MLT1J1	LTR/ERVL-MaLR	66	177	(267)	417732
195	25.0	7.1	0.0	chr10	33479038	33479089	(100318333)	C	Tigger19b	DNA/TcMar-Tigger	(370)	180	125	423318
1963	13.2	4.2	0.0	chr10	33479232	33479504	(100317918)	C	AluSz	SINE/Alu	(27)	285	1	423319
299	22.8	20.9	4.5	chr10	35332395	35332592	(98464830)	+	Charlie15b	DNA/hAT-Charlie	823	1061	(0)	426444
245	25.4	9.5	0.0	chr10	35611829	35611895	(98185527)	C	MLT1J1	LTR/ERVL-MaLR	(114)	334	261	426817
410	23.4	15.1	1.4	chr10	35611940	35612082	(98185340)	C	MLT1J1	LTR/ERVL-MaLR	(275)	169	4	426817
406	28.5	4.4	0.8	chr10	37858188	37858318	(95939104)	+	MIRb	SINE/MIR	118	253	(15)	430157
515	23.5	2.5	1.7	chr10	47203111	47203227	(86594195)	C	MLT1I	LTR/ERVL-MaLR	(49)	362	245	438859
2524	22.6	2.5	0.4	chr10	47203284	47203839	(86593583)	+	MLT1F1	LTR/ERVL-MaLR	1	568	(1)	438860
28	28.8	7.3	0.0	chr10	47383888	47384023	(86413399)	+	GA-rich	Low_complexity	1	146	(0)	439114
239	22.8	3.4	0.0	chr10	67793354	67793410	(66004012)	+	MIRb	SINE/MIR	188	246	(22)	467900
569	3.2	0.0	0.0	chr10	68472182	68472243	(65325179)	C	AluYa5	SINE/Alu	(99)	212	151	469298
20	0.0	0.0	0.0	chr10	69507652	69507673	(64289749)	+	(T)n	Simple_repeat	1	22	(0)	471747
14	19.7	4.2	2.0	chr10	69507674	69507697	(64289725)	+	(TGTTT)n	Simple_repeat	3	50	(0)	471748
523	16.8	11.6	0.0	chr10	72038508	72038613	(61758809)	C	LTR40a	LTR/ERVL	(398)	121	2	476407
218	25.5	6.7	5.8	chr10	72038618	72038721	(61758701)	C	MIRc	SINE/MIR	(128)	140	36	476409
307	31.1	1.1	0.0	chr10	72038818	72038907	(61758515)	+	Tigger16a	DNA/TcMar-Tigger	860	950	(7)	476410
19	15.9	3.9	1.9	chr10	74825912	74825962	(58971460)	+	G-rich	Low_complexity	1	53	(0)	481942
14	18.2	0.0	0.0	chr10	74826033	74826063	(58971359)	+	(CGCG)n	Simple_repeat	1	31	(0)	481943
1892	14.6	2.0	3.2	chr10	75081034	75081167	(58716255)	C	AluJo	SINE/Alu	(186)	126	1	482383
399	22.3	2.1	0.0	chr10	75081383	75081476	(58715946)	C	LTR33	LTR/ERVL	(64)	451	356	482385
628	21.7	3.7	7.5	chr10	75081499	75081697	(58715725)	+	MLT1J	LTR/ERVL-MaLR	292	482	(30)	482386
926	27.2	12.5	1.4	chr10	75081728	75082089	(58715333)	C	L2b	LINE/L2	(424)	2995	2588	482382
2533	12.9	3.2	2.6	chr10	77717100	77717528	(56079894)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	486471
726	20.8	8.8	8.0	chr10	77717529	77717728	(56079694)	C	MIR	SINE/MIR	(43)	219	12	486470
543	28.3	5.9	4.4	chr10	78163096	78163346	(55634076)	+	MLT1I	LTR/ERVL-MaLR	128	382	(29)	487296
1246	24.8	11.0	1.0	chr10	91779056	91779438	(42017984)	+	MLT1J1	LTR/ERVL-MaLR	1	426	(18)	507836
209	26.2	16.3	1.0	chr10	96587309	96587412	(37210010)	+	MIRc	SINE/MIR	84	206	(62)	516222
600	30.3	12.1	7.9	chr10	97726499	97726853	(36070569)	C	MLT1J2	LTR/ERVL-MaLR	(16)	432	61	518603
283	30.6	13.9	5.2	chr10	101048629	101048886	(32748536)	+	L2b	LINE/L2	3137	3387	(0)	524380
209	26.5	9.6	4.0	chr10	101048974	101049126	(32748296)	+	L2b	LINE/L2	3202	3336	(39)	524381
413	31.2	10.3	0.6	chr10	101049134	101049291	(32748131)	C	MIR3	SINE/MIR	(33)	175	1	524382
13	14.2	3.2	0.0	chr10	101354262	101354292	(32443130)	+	(GGCGCT)n	Simple_repeat	1	32	(0)	524954
192	31.8	4.5	1.2	chr10	103781084	103781169	(30016253)	+	L2c	LINE/L2	3230	3318	(69)	529628
1007	27.2	13.8	0.0	chr10	103781206	103781550	(30015872)	+	MLT1J2	LTR/ERVL-MaLR	49	448	(0)	529629
16	21.7	0.0	0.0	chr10	119079980	119080011	(14717411)	+	A-rich	Low_complexity	1	32	(0)	553159
16	8.3	0.0	0.0	chr10	119658178	119658203	(14139219)	+	(TGAA)n	Simple_repeat	1	26	(0)	554331
388	30.1	4.0	6.7	chr10	119658666	119658843	(14138579)	+	MIRb	SINE/MIR	41	213	(55)	554332
39	0.0	0.0	0.0	chr10	122980724	122980759	(10816663)	+	(GCGGG)n	Simple_repeat	1	36	(0)	559574
857	26.7	4.4	2.8	chr10	122980993	122981118	(10816304)	C	MamRep137	DNA/TcMar-Tigger	(23)	487	353	559575
296	37.1	2.3	2.9	chr10	124674325	124674499	(9122923)	C	MIR	SINE/MIR	(1)	261	88	562291
452	29.4	14.3	3.9	chr10	125131621	125131900	(8665522)	C	MLT1J2	LTR/ERVL-MaLR	(22)	426	113	563016
1002	26.9	7.8	1.8	chr10	125231212	125231537	(8565885)	+	Helitron3Na_Mam	RC/Helitron	6	352	(134)	563184
690	20.6	1.9	0.0	chr10	125231683	125231837	(8565585)	C	MER5A1	DNA/hAT-Charlie	(0)	166	9	563185
377	7.3	0.8	7.5	chr10	126251444	126252320	(7545102)	+	(GGAT)n	Simple_repeat	1	884	(0)	564615
2927	17.3	5.2	2.2	chr10	126252321	126252818	(7544604)	C	MLT2B3	LTR/ERVL	(38)	516	2	564614
39	4.6	0.0	0.0	chr10	129949992	129950036	(3847386)	+	(AGGAGGG)n	Simple_repeat	1	45	(0)	568916
13	18.6	2.6	0.0	chr10	129950037	129950070	(3847352)	+	G-rich	Low_complexity	4	38	(0)	568917
2544	28.1	8.7	3.1	chr10	132854648	132857343	(940079)	C	L1MB5	LINE/L1	(3311)	3008	264	571991
612	20.6	3.5	0.0	chr10	132857369	132857504	(939918)	C	L1MB5	LINE/L1	(6224)	176	36	571991
279	28.6	6.0	1.6	chr10	133359955	133360082	(437340)	+	Charlie22a	DNA/hAT-Charlie	60	193	(298)	572436
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
17	29.1	4.9	2.8	chr11	1736337	1736438	(133350184)	+	(TGGA)n	Simple_repeat	1	107	(0)	575019
12	19.3	7.1	0.0	chr11	1736461	1736502	(133350120)	+	GA-rich	Low_complexity	1	45	(0)	575020
127	20.4	6.9	0.7	chr11	1736511	1736889	(133349733)	+	(GAATG)n	Satellite	1	405	(0)	575021
392	25.2	0.7	0.4	chr11	2106412	2107376	(132979246)	+	(GATG)n	Simple_repeat	1	972	(0)	575437
1118	29.1	14.4	4.2	chr11	6604474	6605505	(128481117)	C	L2c	LINE/L2	(209)	3178	2021	581572
15	6.7	6.1	2.9	chr11	11816263	11816295	(123270327)	+	(CATT)n	Simple_repeat	1	35	(0)	589780
295	34.8	0.0	0.0	chr11	11816305	11816393	(123270229)	+	MIR	SINE/MIR	5	93	(169)	589781
786	26.7	6.6	8.1	chr11	11816394	11816776	(123269846)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	35	589782
945	28.6	10.4	4.7	chr11	11876445	11876958	(123209664)	C	MLT1H1	LTR/ERVL-MaLR	(8)	547	1	589888
3720	18.3	8.3	5.4	chr11	15034491	15035648	(120050974)	C	MER52C	LTR/ERV1	(0)	1278	2	594845
283	28.8	36.4	0.0	chr11	15035709	15035877	(120050745)	+	MIR	SINE/MIR	8	252	(10)	594846
15	19.4	3.5	5.0	chr11	17276711	17276768	(117809854)	+	(GGCG)n	Simple_repeat	1	60	(0)	598473
310	25.2	19.5	4.1	chr11	18115297	18115391	(116971231)	+	MIR	SINE/MIR	2	101	(161)	599932
55	0.0	1.8	1.8	chr11	18115392	18115446	(116971176)	+	(TG)n	Simple_repeat	1	56	(0)	599933
310	25.2	19.5	4.1	chr11	18115447	18115569	(116971053)	+	MIR	SINE/MIR	102	261	(1)	599932
458	24.1	7.9	0.0	chr11	18321821	18321936	(116764686)	C	L2b	LINE/L2	(0)	3375	3250	600254
13	13.7	0.0	0.0	chr11	18322761	18322785	(116763837)	+	(GCGG)n	Simple_repeat	1	25	(0)	600255
11	14.8	4.9	4.7	chr11	20610324	20610364	(114476258)	+	(GGAGCTGG)n	Simple_repeat	1	43	(0)	604219
2363	10.9	0.3	0.0	chr11	33065270	33065562	(102021060)	C	AluSq2	SINE/Alu	(19)	294	1	622753
296	29.2	15.2	6.0	chr11	33065563	33065640	(102020982)	C	MIRb	SINE/MIR	(168)	100	2	622752
993	27.1	6.2	7.2	chr11	35249010	35249575	(99837047)	+	L1ME3F	LINE/L1	5672	6231	(12)	626466
12	35.1	1.4	1.4	chr11	35663487	35663556	(99423066)	+	GA-rich	Low_complexity	1	71	(0)	627135
372	28.8	2.7	2.7	chr11	43950695	43950844	(91135778)	+	MLT1J2	LTR/ERVL-MaLR	251	400	(48)	639257
2317	28.4	7.7	7.2	chr11	43950892	43951721	(91134901)	+	MLT1J2-int	LTR/ERVL-MaLR	1	868	(519)	639257
513	27.8	11.8	3.5	chr11	44732838	44733154	(90353468)	C	MLT1J1	LTR/ERVL-MaLR	(31)	413	67	640730
2406	4.0	3.0	2.3	chr11	59549924	59550225	(75536397)	C	AluY	SINE/Alu	(7)	304	1	656944
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
13	21.9	2.3	2.2	chr11	60906383	60906426	(74180196)	+	(GGCGCCG)n	Simple_repeat	1	45	(0)	659081
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
2427	22.4	2.7	7.7	chr11	61473481	61473588	(73613034)	+	MLT2B4	LTR/ERVL	474	556	(0)	660255
1016	27.5	15.2	12.4	chr11	61473589	61473639	(73612983)	C	MLT1J1-int	LTR/ERVL-MaLR	(724)	663	609	660251
478	23.2	7.9	6.8	chr11	61473647	61473808	(73612814)	C	MLT1J1	LTR/ERVL-MaLR	(22)	426	263	660251
288	23.2	13.7	1.2	chr11	61473867	61473949	(73612673)	C	MLT1J1	LTR/ERVL-MaLR	(288)	160	66	660251
568	32.1	4.3	1.6	chr11	61473951	61474197	(73612425)	C	MIR	SINE/MIR	(1)	261	8	660257
782	17.5	0.6	0.1	chr11	64113363	64114790	(70971832)	+	(TGGA)n	Simple_repeat	1	1437	(0)	665019
334	34.8	15.6	2.9	chr11	66886197	66886850	(68199772)	C	L2	LINE/L2	(337)	3082	2331	670420
1102	28.1	11.5	2.9	chr11	66887058	66887739	(68198883)	+	HAL1	LINE/L1	595	1342	(1165)	670421
1708	24.2	4.5	2.3	chr11	69174651	69175082	(65911540)	C	MLT1J2	LTR/ERVL-MaLR	(2)	446	5	674644
536	27.7	3.8	2.5	chr11	69688232	69688309	(65398313)	C	L1ME4b	LINE/L1	(201)	691	612	675498
449	22.2	3.8	3.8	chr11	69688311	69688441	(65398181)	C	MLT1B	LTR/ERVL-MaLR	(28)	383	253	675500
628	24.0	13.0	0.3	chr11	69688533	69688862	(65397760)	C	L1MC5a	LINE/L1	(0)	2777	2400	675501
358	27.0	3.8	3.8	chr11	69689548	69689678	(65396944)	C	MLT1B	LTR/ERVL-MaLR	(28)	383	253	675505
677	24.3	13.5	0.3	chr11	69689777	69690090	(65396532)	C	L1MC5a	LINE/L1	(0)	2777	2416	675506
256	20.8	6.1	0.0	chr11	69929337	69929413	(65157209)	+	MLT1J2	LTR/ERVL-MaLR	21	102	(346)	675972
748	24.7	9.3	1.9	chr11	69929436	69929703	(65156919)	+	MLT1J2	LTR/ERVL-MaLR	156	445	(3)	675972
316	33.5	18.5	0.0	chr11	69929710	69929894	(65156728)	C	MIRb	SINE/MIR	(8)	260	34	675973
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
12	27.7	0.0	0.0	chr11	95789478	95789516	(39297106)	+	(TCC)n	Simple_repeat	1	39	(0)	719160
14	20.9	4.3	2.0	chr11	102110476	102110522	(32976100)	+	GA-rich	Low_complexity	1	49	(0)	727405
18	21.2	4.8	1.5	chr11	102110645	102110706	(32975916)	+	(GGAGGC)n	Simple_repeat	1	65	(0)	727406
12	16.8	0.0	5.4	chr11	107591030	107591066	(27495556)	+	(CCGCGC)n	Simple_repeat	1	37	(0)	735149
14	17.5	2.4	2.4	chr11	107591296	107591336	(27495286)	+	(GAGCGCG)n	Simple_repeat	1	42	(0)	735150
20	8.9	5.7	5.4	chr11	107858872	107858924	(27227698)	+	(CGCT)n	Simple_repeat	1	56	(0)	735683
17	14.4	0.0	4.8	chr11	110092915	110092956	(24993666)	+	(GCGG)n	Simple_repeat	1	42	(0)	739265
2288	13.0	4.7	6.1	chr11	110376986	110377394	(24709228)	C	MER57B2	LTR/ERV1	(0)	403	1	739759
1397	15.9	2.4	3.1	chr11	113031930	113032187	(22054435)	C	AluJo	SINE/Alu	(3)	309	54	744001
234	34.5	0.7	8.8	chr11	113032188	113032257	(22054365)	C	MIRb	SINE/MIR	(132)	136	77	743998
342	24.1	24.2	3.7	chr11	113032380	113032620	(22054002)	C	MLT1J2	LTR/ERVL-MaLR	(124)	324	19	744002
2245	28.5	2.2	0.0	chr11	113663193	113663684	(21422938)	+	FordPrefect	DNA/hAT-Tip100	100	602	(1081)	744948
4019	23.7	5.5	1.1	chr11	113663695	113664595	(21422027)	+	FordPrefect	DNA/hAT-Tip100	659	1601	(82)	744949
1149	25.4	6.6	1.2	chr11	117741197	117741538	(17345084)	+	MLT1J1	LTR/ERVL-MaLR	71	432	(12)	751683
16	19.4	2.6	8.9	chr11	118925732	118925808	(16160814)	+	(GGC)n	Simple_repeat	1	79	(0)	753868
14	25.2	3.5	1.7	chr11	119729178	119729235	(15357387)	+	(CGCTCT)n	Simple_repeat	1	60	(0)	755357
13	14.3	3.0	2.9	chr11	123358621	123358653	(11727969)	+	(TCC)n	Simple_repeat	1	34	(0)	761389
17	13.0	7.1	0.0	chr11	128522439	128522480	(6564142)	+	G-rich	Low_complexity	1	45	(0)	769017
2958	20.3	6.6	2.7	chr11	129143290	129143992	(5942630)	+	MER44C	DNA/TcMar-Tigger	2	733	(0)	769889
227	28.3	22.4	3.2	chr11	129948617	129948773	(5137849)	C	L3	LINE/CR1	(237)	3862	3667	771038
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
327	34.1	1.5	0.8	chr12	2256139	2256271	(131019038)	+	MER5A	DNA/hAT-Charlie	51	184	(5)	781931
37	5.0	0.0	0.0	chr12	4379195	4379235	(128896074)	+	(AC)n	Simple_repeat	1	41	(0)	785423
2130	7.6	4.0	0.0	chr12	6568652	6568942	(126706367)	+	AluSq	SINE/Alu	1	303	(10)	788954
11	21.7	7.3	1.7	chr12	12725648	12725702	(120549607)	+	(CCTCGCG)n	Simple_repeat	1	59	(0)	798636
406	23.5	5.3	8.5	chr12	13044887	13045063	(120230246)	C	MIRc	SINE/MIR	(81)	187	17	799301
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
57	1.9	0.0	0.0	chr12	24563496	24563548	(108711761)	+	(CA)n	Simple_repeat	1	53	(0)	815083
14	17.2	5.1	0.0	chr12	26833308	26833320	(106441989)	+	G-rich	Low_complexity	1	23	(39)	818547
13	8.4	0.0	3.7	chr12	26833321	26833347	(106441962)	+	(GGGGC)n	Simple_repeat	1	27	(0)	818548
14	17.2	5.1	0.0	chr12	26833348	26833366	(106441943)	+	G-rich	Low_complexity	24	62	(0)	818547
21	0.0	0.0	0.0	chr12	27525514	27525536	(105749773)	+	(A)n	Simple_repeat	1	23	(0)	819697
6356	11.7	2.3	2.2	chr12	30850965	30851917	(102423392)	+	LTR13_	LTR/ERVK	1	954	(0)	824284
13	25.4	0.0	2.3	chr12	32106755	32106798	(101168511)	+	(CCCCCCG)n	Simple_repeat	1	44	(0)	826842
13	20.6	4.9	4.7	chr12	32106869	32106959	(101168350)	+	(GCGAGCC)n	Simple_repeat	1	91	(0)	826843
15	19.9	2.0	3.9	chr12	32107220	32107269	(101168040)	+	(CTTTCC)n	Simple_repeat	1	51	(0)	826844
489	27.2	6.7	2.5	chr12	41882121	41882320	(91392989)	C	MLT1H	LTR/ERVL-MaLR	(222)	327	119	835630
13	20.9	0.0	0.0	chr12	47737115	47737147	(85538162)	+	(GCCCCT)n	Simple_repeat	1	33	(0)	844116
15	5.5	0.0	0.0	chr12	47737170	47737188	(85538121)	+	(CT)n	Simple_repeat	1	19	(0)	844117
15	22.3	0.0	2.3	chr12	47737538	47737581	(85537728)	+	(CCAGCT)n	Simple_repeat	1	44	(0)	844118
20	22.6	0.0	0.0	chr12	48119197	48119243	(85156066)	+	GA-rich	Low_complexity	1	47	(0)	844727
13	12.7	2.6	5.1	chr12	51391968	51392005	(81883304)	+	(AGCCCGG)n	Simple_repeat	1	39	(0)	851262
300	29.2	14.4	4.3	chr12	52903183	52903368	(80371941)	C	MIRb	SINE/MIR	(32)	236	29	853626
40	2.3	0.0	2.2	chr12	52903845	52903890	(80371419)	+	(CCACC)n	Simple_repeat	1	46	(0)	853627
17	24.2	3.5	0.0	chr12	53079186	53079243	(80196066)	+	(GCCCAGG)n	Simple_repeat	1	60	(0)	854015
24	16.6	3.7	0.0	chr12	53499492	53499545	(79775764)	+	(CCT)n	Simple_repeat	1	56	(0)	854871
12	5.6	0.0	0.0	chr12	57454604	57454622	(75820687)	+	(CAC)n	Simple_repeat	1	19	(0)	861360
525	32.4	7.4	6.2	chr12	65066155	65066539	(68208770)	+	MLT1J2	LTR/ERVL-MaLR	59	448	(0)	872215
30	20.2	2.3	3.4	chr12	67648632	67648717	(65626592)	+	(GGC)n	Simple_repeat	1	88	(0)	876221
18	32.7	1.5	0.0	chr12	67648690	67648757	(65626552)	+	(GC)n	Simple_repeat	1	69	(0)	876222
276	29.9	6.7	6.7	chr12	71263039	71263203	(62012106)	C	MLT1J	LTR/ERVL-MaLR	(16)	496	332	882063
281	30.2	9.7	2.8	chr12	71263236	71263378	(62011931)	C	MLT1J	LTR/ERVL-MaLR	(289)	223	70	882063
12	13.9	0.0	0.0	chr12	76084480	76084503	(57190806)	+	(TCCC)n	Simple_repeat	1	24	(0)	888580
17	16.9	2.0	3.9	chr12	76084621	76084670	(57190639)	+	(GCGGCA)n	Simple_repeat	1	51	(0)	888581
16	16.5	0.0	0.0	chr12	78863812	78863838	(54411471)	+	A-rich	Low_complexity	1	27	(0)	892738
15	21.8	0.0	0.0	chr12	89708841	89708877	(43566432)	+	(GGC)n	Simple_repeat	1	37	(0)	907474
27	23.0	1.4	1.4	chr12	89709271	89709343	(43565966)	+	(CGC)n	Simple_repeat	1	74	(0)	907475
617	25.0	3.5	2.0	chr12	90101308	90101507	(43173802)	C	UCON76	Unknown	(10)	231	29	908058
949	24.6	4.8	0.4	chr12	96091682	96091918	(37183391)	C	MLT1J2-int	LTR/ERVL-MaLR	(1138)	249	2	918412
1283	22.8	12.6	0.8	chr12	96091954	96092311	(37182998)	C	MLT1J2	LTR/ERVL-MaLR	(36)	412	7	918412
2455	18.8	10.4	0.4	chr12	103925325	103925810	(29349499)	+	MLT1F	LTR/ERVL-MaLR	1	540	(8)	931549
554	18.3	3.4	0.0	chr12	106956654	106956768	(26318541)	C	MamRep1879	DNA/hAT-Tip100?	(90)	126	8	937154
1240	26.2	7.6	1.7	chr12	110804507	110804914	(22470395)	+	MLT1J2	LTR/ERVL-MaLR	2	435	(13)	945586
2681	5.2	0.0	0.0	chr12	110804962	110805266	(22470043)	C	AluY	SINE/Alu	(6)	305	1	945587
365	34.8	8.5	1.7	chr12	111233611	111233841	(22041468)	C	MIRb	SINE/MIR	(7)	261	14	946573
632	26.1	4.6	5.4	chr12	111233861	111234164	(22041145)	C	MLT1J2	LTR/ERVL-MaLR	(83)	365	4	946574
977	15.7	4.2	6.0	chr12	111629804	111629929	(21645380)	+	MLT1B	LTR/ERVL-MaLR	82	213	(177)	947541
654	22.7	1.4	12.8	chr12	111629980	111630123	(21645186)	C	MLT1H	LTR/ERVL-MaLR	(228)	321	187	947543
2269	10.7	2.6	0.0	chr12	111630124	111630422	(21644887)	+	AluSz	SINE/Alu	2	308	(4)	947544
228	23.3	1.4	6.4	chr12	113152924	113153001	(20122308)	C	Charlie8	DNA/hAT-Charlie	(3)	2425	2352	950919
275	26.2	1.4	19.0	chr12	113153532	113153605	(20121704)	C	MIRb	SINE/MIR	(6)	262	207	950920
2020	8.4	0.7	2.8	chr12	113153606	113153891	(20121418)	C	AluJb	SINE/Alu	(24)	288	9	950921
288	25.0	20.5	3.8	chr12	113877480	113877612	(19397697)	+	MLT1J2	LTR/ERVL-MaLR	288	448	(0)	952671
274	31.1	2.4	2.4	chr12	115194386	115194510	(18080799)	C	L2b	LINE/L2	(299)	3076	2952	955490
216	30.6	16.1	0.0	chr12	115512839	115513067	(17762242)	+	L2a	LINE/L2	2110	2382	(1037)	956180
809	24.6	3.8	0.6	chr12	115513080	115513259	(17762050)	C	MLT1J2	LTR/ERVL-MaLR	(7)	441	256	956181
735	24.2	4.4	0.0	chr12	115513275	115513427	(17761882)	+	MER20	DNA/hAT-Charlie	37	196	(23)	956182
868	26.8	8.6	2.2	chr12	116391122	116391438	(16883871)	+	MLT1J2	LTR/ERVL-MaLR	110	448	(0)	957916
672	16.3	0.0	0.0	chr12	116391449	116391546	(16883763)	C	FRAM	SINE/Alu	(60)	116	19	957917
333	23.1	4.1	2.2	chr12	116391619	116391721	(16883588)	+	L2b	LINE/L2	3275	3387	(0)	957918
18	3.9	3.7	0.0	chr12	116545182	116545208	(16730101)	+	(ATA)n	Simple_repeat	1	28	(0)	958337
570	30.9	2.9	0.5	chr12	116545322	116545526	(16729783)	+	MamRep137	DNA/TcMar-Tigger	237	446	(64)	958338
1738	16.7	4.2	0.3	chr12	116545547	116545840	(16729469)	C	AluSz6	SINE/Alu	(6)	306	1	958339
1832	15.3	0.0	3.9	chr12	116628282	116628589	(16646720)	C	AluJr	SINE/Alu	(16)	296	1	958566
767	32.5	9.9	2.2	chr12	116628667	116629113	(16646196)	+	L2a	LINE/L2	2942	3426	(0)	958567
14	14.6	0.0	3.1	chr12	116910931	116910962	(16364347)	+	(GCG)n	Simple_repeat	1	32	(0)	959265
15	16.6	0.0	2.8	chr12	116911069	116911104	(16364205)	+	(GGCGCA)n	Simple_repeat	1	36	(0)	959266
12	16.8	7.5	0.0	chr12	116911368	116911407	(16363902)	+	(CGCCCC)n	Simple_repeat	1	43	(0)	959267
348	26.8	20.7	5.7	chr12	117875661	117875977	(15399332)	+	L2a	LINE/L2	3039	3415	(11)	961275
1528	16.0	0.7	9.1	chr12	118135522	118135736	(15139573)	C	AluJo	SINE/Alu	(113)	199	1	961945
343	17.5	1.7	0.0	chr12	118135834	118135890	(15139419)	C	LSU-rRNA_Hsa	rRNA	(2344)	2691	2634	961947
243	17.5	0.0	0.0	chr12	119630146	119630185	(13645124)	C	MER58B	DNA/hAT-Charlie	(73)	268	229	965199
472	11.4	1.4	0.0	chr12	119630186	119630255	(13645054)	C	MSTA	LTR/ERVL-MaLR	(0)	428	358	965208
229	23.3	1.6	1.6	chr12	119630316	119630376	(13644933)	C	MLT1I	LTR/ERVL-MaLR	(121)	323	263	965209
1248	16.1	5.0	5.4	chr12	119630396	119630618	(13644691)	C	MER58A	DNA/hAT-Charlie	(0)	224	3	965210
513	18.9	5.9	1.2	chr12	120994509	120995889	(12279420)	+	(TCCAC)n	Simple_repeat	1	1462	(0)	968329
16	23.9	2.9	4.2	chr12	122078733	122078801	(11196508)	+	(CGCCG)n	Simple_repeat	1	71	(0)	971060
234	34.5	2.7	2.1	chr12	124240383	124240527	(9034782)	C	L2c	LINE/L2	(482)	2937	2792	975740
1038	25.1	12.4	3.6	chr12	124240546	124240934	(9034375)	+	MLT1J2	LTR/ERVL-MaLR	3	430	(18)	975741
864	24.8	3.7	6.4	chr12	124283871	124284309	(8991000)	+	Tigger18a	DNA/TcMar-Tigger	426	852	(0)	975832
1236	22.7	18.3	2.9	chr12	124284481	124284857	(8990452)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	1	975833
269	17.0	1.9	0.0	chr12	124745566	124745621	(8529688)	+	L2a	LINE/L2	3331	3426	(0)	976732
24	13.0	0.0	0.0	chr12	124745718	124745759	(8529550)	+	(GAAT)n	Simple_repeat	1	42	(0)	976733
452	24.7	0.0	0.0	chr12	124786658	124786750	(8488559)	+	MLT1J2	LTR/ERVL-MaLR	44	136	(312)	976828
359	29.7	7.8	0.0	chr12	124786794	124786911	(8488398)	+	MLT1J2	LTR/ERVL-MaLR	253	380	(68)	976828
23	6.9	8.7	0.0	chr12	124786979	124787024	(8488285)	+	(AATAA)n	Simple_repeat	1	50	(0)	976829
1526	29.3	5.2	0.0	chr12	124829147	124829734	(8445575)	+	L2a	LINE/L2	2537	3163	(263)	976925
354	27.5	2.7	0.9	chr12	124829738	124829847	(8445462)	C	L2a	LINE/L2	(1)	3425	3314	976926
2414	9.4	0.7	0.0	chr12	124889563	124889860	(8385449)	+	AluSx1	SINE/Alu	1	300	(12)	977073
647	27.3	10.8	5.0	chr12	124889889	124890331	(8384978)	C	MLT1J	LTR/ERVL-MaLR	(7)	505	34	977074
2465	5.8	2.3	0.0	chr12	124890334	124890627	(8384682)	+	AluSg7	SINE/Alu	1	301	(8)	977075
626	25.2	6.7	10.4	chr12	124979389	124979684	(8295625)	+	L1ME3D	LINE/L1	5704	6006	(236)	977287
644	26.3	1.5	2.5	chr12	124979687	124979885	(8295424)	+	MLT1J2	LTR/ERVL-MaLR	251	447	(1)	977289
240	29.8	13.0	0.0	chr12	124979975	124980068	(8295241)	C	MIRb	SINE/MIR	(46)	222	115	977290
2251	13.1	11.0	0.0	chr12	130921277	130921657	(2353652)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	987477
311	5.4	0.0	0.0	chr12	130921661	130921697	(2353612)	C	MSTA	LTR/ERVL-MaLR	(391)	37	1	987478
443	28.9	10.4	4.2	chr12	130921779	130922085	(2353224)	C	MLT1J2	LTR/ERVL-MaLR	(38)	410	71	987476
545	18.0	4.5	3.0	chr12	131026657	131026788	(2248521)	C	MER20	DNA/hAT-Charlie	(55)	164	31	987653
719	27.9	14.1	0.5	chr12	132208410	132208819	(1066490)	+	MLT1H	LTR/ERVL-MaLR	75	549	(0)	989215
348	23.5	1.1	0.5	chr12	132518212	132519013	(756296)	+	(ATCC)n	Simple_repeat	1	811	(0)	989556
22	16.3	0.0	0.0	chr12	132618225	132618260	(657049)	+	A-rich	Low_complexity	1	36	(0)	989681
1468	17.5	4.2	4.9	chr13	21137678	21137963	(93226365)	+	AluJb	SINE/Alu	1	284	(28)	995594
2197	24.9	10.3	8.9	chr13	21137966	21138007	(93226321)	C	L1ME3B	LINE/L1	(49)	6193	6154	995595
2290	7.9	0.3	2.3	chr13	21138008	21138310	(93226018)	+	AluSg7	SINE/Alu	1	297	(12)	995596
13	11.8	7.7	2.4	chr13	21458926	21458964	(92905364)	+	(GCGTCCG)n	Simple_repeat	1	42	(0)	996140
24	30.0	1.8	2.6	chr13	21459329	21459439	(92904889)	+	(CCCCCCG)n	Simple_repeat	1	113	(0)	996141
31	19.1	3.9	0.0	chr13	26254168	26254244	(88110084)	+	(TGAG)n	Simple_repeat	1	80	(0)	1002972
281	29.1	11.6	1.7	chr13	30870056	30870253	(83494075)	+	MIRc	SINE/MIR	19	234	(34)	1010521
252	36.4	7.7	6.0	chr13	32177866	32178131	(82186197)	C	L2b	LINE/L2	(4)	3371	3101	1012400
12	15.7	2.6	5.0	chr13	41311487	41311525	(73052803)	+	(CCTG)n	Simple_repeat	1	40	(0)	1025640
2041	18.8	3.2	5.6	chr13	41427055	41431198	(72933130)	+	SATR2	Satellite	1	4047	(47)	1025852
914	21.2	8.2	4.7	chr13	42058619	42059011	(72305317)	+	MLT1J2	LTR/ERVL-MaLR	4	448	(0)	1026782
226	31.5	2.1	3.2	chr13	42059016	42059110	(72305218)	+	MIRb	SINE/MIR	114	207	(61)	1026783
15	13.7	0.0	0.0	chr13	44227392	44227415	(70136913)	+	(T)n	Simple_repeat	1	24	(0)	1029959
728	24.4	2.3	1.1	chr13	44227442	44227615	(70136713)	C	MLT1J2	LTR/ERVL-MaLR	(8)	440	265	1029960
1090	19.3	2.8	0.5	chr13	44227623	44227835	(70136493)	+	MER20	DNA/hAT-Charlie	2	219	(0)	1029961
23	20.5	4.4	4.2	chr13	49220073	49220163	(65144165)	+	G-rich	Low_complexity	1	95	(0)	1037997
14	23.7	1.9	3.6	chr13	49220195	49220248	(65144080)	+	(GCGCA)n	Simple_repeat	1	55	(0)	1037998
2128	12.1	2.0	0.0	chr13	49606702	49606998	(64757330)	+	AluSz6	SINE/Alu	5	307	(5)	1038681
320	20.7	0.0	0.6	chr13	49607090	49607172	(64757156)	+	MLT1J	LTR/ERVL-MaLR	242	367	(145)	1038682
491	28.9	5.0	2.8	chr13	51117777	51118109	(63246219)	C	MLT1J	LTR/ERVL-MaLR	(64)	448	75	1041103
16	9.7	0.0	0.0	chr13	66666428	66666449	(47697879)	+	(T)n	Simple_repeat	1	22	(0)	1061311
3614	17.5	17.8	5.7	chr13	67415684	67416618	(46947710)	+	LTR27E	LTR/ERV1	1	1073	(4)	1062246
490	28.1	11.6	4.8	chr13	67416619	67416874	(46947454)	+	L1MEi	LINE/L1	1108	1390	(822)	1062245
7865	7.0	19.8	0.2	chr13	68170797	68172063	(46192265)	+	LTR12C	LTR/ERV1	3	1579	(0)	1063192
337	36.0	2.1	4.5	chr13	70980582	70980779	(43383549)	C	LTR78	LTR/ERV1	(915)	389	197	1066861
14	17.5	6.7	0.0	chr13	77698193	77698264	(36666064)	+	G-rich	Low_complexity	1	76	(0)	1076569
12	21.9	1.9	5.6	chr13	77698385	77698437	(36665891)	+	G-rich	Low_complexity	1	54	(0)	1076570
328	35.5	0.9	0.9	chr13	77751438	77751548	(36612780)	+	L2b	LINE/L2	3253	3363	(12)	1076622
646	23.8	4.0	2.3	chr13	83276866	83277037	(31087291)	+	MER61-int	LTR/ERV1	235	409	(4808)	1083795
13	13.4	6.1	0.0	chr13	97141833	97141865	(17222463)	+	(CAGAGG)n	Simple_repeat	1	35	(0)	1102578
494	31.2	3.1	0.5	chr13	112645674	112645863	(1718465)	+	MLT1C	LTR/ERVL-MaLR	263	457	(10)	1123763
1426	25.4	0.6	1.2	chr13	113470053	113470390	(893938)	+	Tigger3a	DNA/TcMar-Tigger	10	345	(3)	1124734
254	24.0	1.9	0.9	chr13	113470393	113470497	(893831)	+	L1MC5a	LINE/L1	1054	1159	(1832)	1124730
2190	11.6	4.0	0.0	chr14	21191465	21191756	(85851962)	+	AluSq	SINE/Alu	1	304	(9)	1129251
3953	21.9	6.8	8.6	chr14	21191757	21191933	(85851785)	+	L1ME3	LINE/L1	961	1130	(5503)	1129250
6733	20.8	9.8	3.7	chr14	21191934	21193578	(85850140)	+	MER52A	LTR/ERV1	1	1755	(0)	1129252
33	0.0	2.9	0.0	chr14	23301251	23301285	(83742433)	+	(CCCCCACG)n	Simple_repeat	1	36	(0)	1132658
13	23.2	7.5	1.4	chr14	23301599	23301665	(83742053)	+	(GGAAGGC)n	Simple_repeat	1	72	(0)	1132659
49	3.0	2.7	4.0	chr14	23551653	23551726	(83491992)	+	(CCT)n	Simple_repeat	1	76	(0)	1133023
14	24.3	1.5	6.1	chr14	28766590	28766596	(78277122)	+	(GCGG)n	Simple_repeat	1	61	(0)	1139686
12	21.8	1.9	5.6	chr14	28766597	28766649	(78277069)	+	G-rich	Low_complexity	1	54	(0)	1139687
251	24.7	14.4	0.0	chr14	32224779	32224867	(74818851)	C	MER94	DNA/hAT-Blackjack	(26)	108	5	1144865
310	29.6	3.4	0.0	chr14	32225143	32225284	(74818434)	C	X6A_LINE	LINE/CR1	(13)	1067	921	1144866
669	24.6	8.5	3.0	chr14	32326862	32327062	(74716656)	C	MLT1J2	LTR/ERVL-MaLR	(29)	419	207	1144995
1090	20.5	25.4	1.5	chr14	34981805	34982265	(72061453)	+	LTR36	LTR/ERV1	1	609	(2)	1149087
17	25.0	0.0	4.8	chr14	35534484	35534545	(71509173)	+	G-rich	Low_complexity	1	62	(0)	1150210
23	10.4	0.0	4.4	chr14	50231658	50231702	(56812016)	+	(CGG)n	Simple_repeat	1	45	(0)	1169572
1888	6.3	0.9	0.0	chr14	54396425	54396645	(52647073)	+	AluSp	SINE/Alu	77	299	(14)	1175876
13	28.0	0.0	6.8	chr14	65412838	65412910	(41630808)	+	(CCCTC)n	Simple_repeat	1	73	(0)	1193135
30	0.0	0.0	0.0	chr14	70809057	70809084	(36234634)	+	(CCT)n	Simple_repeat	1	28	(0)	1201774
13	4.8	4.5	0.0	chr14	70809112	70809133	(36234585)	+	(CGG)n	Simple_repeat	1	23	(0)	1201775
16	11.2	0.0	3.2	chr14	70809198	70809228	(36234490)	+	(GCC)n	Simple_repeat	1	31	(0)	1201776
373	25.2	1.9	0.0	chr14	72800253	72800355	(34243363)	+	MER102c	DNA/hAT-Charlie	226	330	(1)	1204840
348	31.9	3.2	2.5	chr14	76546715	76546836	(30496882)	+	L2b	LINE/L2	3250	3372	(3)	1212430
15	7.2	3.2	3.1	chr14	76547189	76547219	(30496499)	+	(GGAGAA)n	Simple_repeat	1	32	(0)	1212431
19	20.6	4.2	4.0	chr14	76761491	76761562	(30282156)	+	(GGC)n	Simple_repeat	1	75	(0)	1212905
890	9.4	4.9	0.0	chr14	77080066	77080182	(29963536)	+	AluSz6	SINE/Alu	175	297	(15)	1213573
327	23.6	8.7	0.5	chr14	77080276	77080390	(29963328)	+	MLT1J2	LTR/ERVL-MaLR	253	374	(70)	1213572
297	28.6	0.0	4.1	chr14	77080497	77080569	(29963149)	C	FordPrefect	DNA/hAT-Tip100	(0)	1683	1614	1213574
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
879	10.7	0.0	7.1	chr14	91118836	91118975	(15924743)	+	FLAM_C	SINE/Alu	1	130	(13)	1235095
437	23.8	6.1	7.7	chr14	91119037	91119218	(15924500)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	334	1235096
199	37.4	11.2	5.0	chr14	91119401	91119632	(15924086)	+	L2	LINE/L2	2037	2282	(1137)	1235097
39	24.7	0.8	3.2	chr14	93332834	93332955	(13710763)	+	(CCG)n	Simple_repeat	1	123	(0)	1239313
16	27.8	0.0	3.1	chr14	93788691	93788754	(13254964)	+	G-rich	Low_complexity	1	64	(0)	1240008
14	15.9	0.0	0.0	chr14	93789096	93789123	(13254595)	+	(CCG)n	Simple_repeat	1	28	(0)	1240009
24	13.1	5.4	5.1	chr14	94174232	94174305	(12869413)	+	(CCCCG)n	Simple_repeat	1	78	(0)	1240752
12	0.0	0.0	5.0	chr14	94174472	94174491	(12869227)	+	(CCG)n	Simple_repeat	1	20	(0)	1240753
284	14.4	5.4	0.2	chr14	94590958	94591535	(12452183)	+	(TCCAC)n	Simple_repeat	1	609	(0)	1241387
215	22.1	16.5	1.1	chr14	95442522	95442608	(11601110)	C	MER5A	DNA/hAT-Charlie	(40)	149	47	1243033
525	28.3	2.4	5.5	chr14	95442798	95443014	(11600704)	+	L2a	LINE/L2	3215	3424	(2)	1243034
187	21.4	0.0	3.5	chr14	101073691	101073748	(5969970)	C	MIR3	SINE/MIR	(71)	137	82	1252711
629	23.9	9.0	9.6	chr14	101357663	101357976	(5685742)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	236	1253038
354	19.3	4.6	2.4	chr14	101357963	101358047	(5685671)	C	MLT1H	LTR/ERVL-MaLR	(227)	322	236	1253038
344	13.6	0.0	1.7	chr14	101358034	101358093	(5685625)	C	MLT1H	LTR/ERVL-MaLR	(227)	322	264	1253038
743	23.6	13.1	0.5	chr14	101358105	101358337	(5685381)	C	MLT1H	LTR/ERVL-MaLR	(227)	322	16	1253039
308	15.4	4.4	0.0	chr14	101947757	101947821	(5095897)	C	Charlie4z	DNA/hAT-Charlie	(98)	69	2	1253923
4331	15.3	6.0	3.1	chr14	103284255	103285130	(3758588)	+	MER4D	LTR/ERV1	1	903	(0)	1256486
2469	14.7	5.5	0.5	chr15	31135553	31135962	(70855227)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1278150
837	29.7	10.8	2.4	chr15	36524260	36524556	(65466633)	+	MLT1J2	LTR/ERVL-MaLR	5	329	(119)	1285771
13	12.1	8.3	0.0	chr15	52679168	52679203	(49311986)	+	(CCGCT)n	Simple_repeat	1	39	(0)	1311700
406	28.6	4.8	0.7	chr15	63458305	63458445	(38532744)	+	MLT1J1	LTR/ERVL-MaLR	1	147	(297)	1328606
305	28.9	3.7	3.7	chr15	63458513	63458620	(38532569)	+	MLT1J1	LTR/ERVL-MaLR	265	372	(76)	1328606
16	17.0	3.4	4.9	chr15	64460651	64460687	(37530502)	+	(GGCGG)n	Simple_repeat	1	34	(0)	1330440
28	3.3	0.0	0.0	chr15	64460688	64460718	(37530471)	+	(GAGCCG)n	Simple_repeat	1	31	(0)	1330441
16	17.0	3.4	4.9	chr15	64460719	64460739	(37530450)	+	(GGCGG)n	Simple_repeat	5	27	(0)	1330442
12	24.5	0.0	2.4	chr15	64702915	64702955	(37288234)	+	G-rich	Low_complexity	1	41	(0)	1330987
15997	10.6	2.6	3.0	chr15	65538007	65539112	(36452077)	+	Tigger1	DNA/TcMar-Tigger	1303	2418	(0)	1332855
2178	24.9	11.6	4.0	chr15	65539113	65539210	(36451979)	+	L1ME3Cz	LINE/L1	167	266	(731)	1332854
15	21.5	0.0	4.3	chr15	67024405	67024451	(34966738)	+	A-rich	Low_complexity	1	47	(0)	1335907
303	30.2	8.7	3.3	chr15	67840842	67840961	(34150228)	C	MIRb	SINE/MIR	(105)	163	37	1337204
31	0.0	0.0	0.0	chr15	67840964	67840992	(34150197)	+	(T)n	Simple_repeat	1	29	(0)	1337205
203	33.6	6.6	2.6	chr15	67841097	67841212	(34149977)	C	L2c	LINE/L2	(1)	3386	3266	1337206
20	3.1	6.1	0.0	chr15	68818036	68818068	(33173121)	+	(AAAT)n	Simple_repeat	1	35	(0)	1339115
19	19.5	3.1	8.1	chr15	68818107	68818202	(33172987)	+	(CCGCGCC)n	Simple_repeat	1	99	(0)	1339116
13	19.4	0.0	2.7	chr15	68818487	68818523	(33172666)	+	(GCCCCC)n	Simple_repeat	1	37	(0)	1339117
296	20.0	6.6	0.0	chr15	69072079	69072163	(32919026)	+	L1ME3G	LINE/L1	200	290	(634)	1339570
712	28.1	10.7	8.0	chr15	69072189	69072641	(32918548)	C	MLT1J	LTR/ERVL-MaLR	(45)	467	1	1339571
684	33.7	7.4	3.2	chr15	69382049	69382364	(32608825)	+	L3	LINE/CR1	3460	3790	(309)	1340113
663	25.1	10.2	0.9	chr15	70416269	70416489	(31574700)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	205	1342107
662	26.8	4.3	10.0	chr15	70429179	70429547	(31561642)	+	MLT1J2	LTR/ERVL-MaLR	100	446	(2)	1342131
1789	22.1	8.1	5.9	chr15	71021512	71022006	(30969183)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	41	1343103
2813	26.2	6.4	2.0	chr15	71022049	71022091	(30969098)	+	L1MEd	LINE/L1	2148	2181	(3965)	1343100
2278	12.2	0.0	0.0	chr15	71022092	71022395	(30968794)	+	AluSx	SINE/Alu	2	305	(7)	1343104
19	6.3	2.9	2.8	chr15	72474428	72474462	(29516727)	+	(CCCT)n	Simple_repeat	1	36	(0)	1345546
21	19.5	3.3	1.6	chr15	72474519	72474578	(29516611)	+	(CGGAGC)n	Simple_repeat	1	62	(0)	1345547
25	27.0	1.0	4.0	chr15	72474642	72474752	(29516437)	+	(GGACGA)n	Simple_repeat	1	107	(0)	1345548
471	26.1	3.5	6.2	chr15	72884991	72885166	(29106023)	C	MLT1J1	LTR/ERVL-MaLR	(14)	430	260	1346260
14	23.4	3.0	5.8	chr15	73052019	73052085	(28939104)	+	GA-rich	Low_complexity	1	69	(0)	1346523
22	23.7	5.8	0.0	chr15	73052219	73052287	(28938902)	+	(GC)n	Simple_repeat	1	73	(0)	1346524
28	0.0	0.0	3.2	chr15	73052293	73052323	(28938866)	+	(CCCGCC)n	Simple_repeat	1	31	(0)	1346525
16	13.2	0.0	0.0	chr15	73052406	73052430	(28938759)	+	(C)n	Simple_repeat	1	25	(0)	1346526
12	16.5	5.9	0.0	chr15	73052443	73052476	(28938713)	+	(CTCCC)n	Simple_repeat	1	36	(0)	1346527
19	17.9	1.9	3.6	chr15	73052520	73052573	(28938616)	+	G-rich	Low_complexity	1	55	(0)	1346528
13	10.5	6.5	0.0	chr15	73052629	73052659	(28938530)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	1346529
21	15.4	4.8	6.9	chr15	73052747	73052829	(28938360)	+	G-rich	Low_complexity	1	87	(0)	1346530
26	23.2	1.6	0.8	chr15	74136550	74136624	(27854565)	+	G-rich	Low_complexity	1	75	(0)	1348315
13	11.6	3.6	0.0	chr15	75579312	75579339	(26411850)	+	G-rich	Low_complexity	1	29	(0)	1351123
21	24.8	2.7	1.3	chr15	75579480	75579552	(26411637)	+	G-rich	Low_complexity	1	75	(0)	1351124
19	13.2	0.0	6.4	chr15	76335895	76335943	(25655246)	+	A-rich	Low_complexity	1	45	(0)	1352419
25	27.4	0.0	2.4	chr15	76335943	76336024	(25655165)	+	GA-rich	Low_complexity	1	82	(0)	1352420
13	25.9	4.0	3.9	chr15	76931545	76931618	(25059571)	+	(CGCCG)n	Simple_repeat	1	77	(0)	1353249
226	28.6	8.7	4.5	chr15	77581451	77581538	(24409651)	+	MIR3	SINE/MIR	92	183	(25)	1354293
1480	31.4	5.1	3.1	chr15	77682875	77683848	(24307341)	+	L1ME3G	LINE/L1	1	782	(142)	1354459
13	15.8	0.0	7.3	chr15	79923094	79923134	(22068055)	+	(CCGCC)n	Simple_repeat	1	41	(0)	1358601
54	1.8	1.8	0.0	chr15	80153168	80153224	(21837965)	+	(GGAGT)n	Simple_repeat	1	58	(0)	1359073
213	20.5	14.3	2.5	chr15	80153278	80153357	(21837832)	+	MIR	SINE/MIR	41	131	(131)	1359074
269	29.9	0.0	0.0	chr15	81393099	81393165	(20598024)	+	MLT1J2	LTR/ERVL-MaLR	263	329	(119)	1361209
474	23.3	7.0	2.4	chr15	82843735	82843857	(19147332)	+	L1ME4a	LINE/L1	5494	5622	(502)	1363555
726	29.3	4.6	8.1	chr15	82843868	82844250	(19146939)	C	MLT1I	LTR/ERVL-MaLR	(13)	398	30	1363560
331	27.5	5.1	0.8	chr15	82844263	82844394	(19146795)	+	L1ME4a	LINE/L1	5618	5755	(369)	1363555
21	22.1	1.7	1.6	chr15	84981671	84981730	(17009459)	+	(GGCGGC)n	Simple_repeat	1	61	(0)	1367057
239	39.0	10.1	0.5	chr15	85831772	85831959	(16159230)	C	MIRb	SINE/MIR	(27)	241	34	1368443
1208	23.5	5.5	5.8	chr15	89040911	89041343	(12949846)	+	MLT1H2	LTR/ERVL-MaLR	32	463	(26)	1373524
2102	20.7	7.3	1.6	chr15	91104117	91104607	(10886582)	C	MLT1H	LTR/ERVL-MaLR	(26)	523	3	1377708
421	22.8	4.6	5.1	chr15	98609563	98609738	(3381451)	+	MER5B	DNA/hAT-Charlie	1	175	(3)	1388930
272	22.8	0.0	8.9	chr15	98609994	98610094	(3381095)	+	L1ME3A	LINE/L1	6060	6151	(22)	1388931
423	30.1	9.6	1.6	chr15	100702925	100703174	(1288015)	C	MLT1I	LTR/ERVL-MaLR	(69)	342	71	1391823
24	9.9	8.1	6.2	chr15	101766319	101766392	(224797)	+	(CT)n	Simple_repeat	1	80	(0)	1393237
328	35.3	8.8	0.0	chr16	1002490	1002707	(89335638)	+	L1MB7	LINE/L1	5737	5975	(209)	1395397
261	34.3	3.6	5.6	chr16	1002724	1002865	(89335480)	+	L1MB7	LINE/L1	6028	6166	(8)	1395397
293	19.4	4.0	0.0	chr16	1025186	1025257	(89313088)	C	MER2	DNA/TcMar-Tigger	(3)	342	268	1395420
1055	8.0	3.9	2.8	chr16	1032545	1034717	(89303628)	+	(ATCC)n	Simple_repeat	1	2258	(0)	1395429
28	34.0	1.5	0.8	chr16	1983983	1984112	(88354233)	+	(CCGGCC)n	Simple_repeat	1	132	(0)	1396745
2051	16.1	0.0	1.9	chr16	3033499	3033815	(87304530)	+	AluJb	SINE/Alu	1	311	(1)	1398362
318	31.4	14.6	8.1	chr16	3033816	3034070	(87304275)	C	L2b	LINE/L2	(846)	2573	2257	1398360
269	32.7	4.5	0.0	chr16	3034084	3034190	(87304155)	+	MIR	SINE/MIR	151	262	(0)	1398363
2522	7.3	0.0	0.6	chr16	3842683	3843015	(86495330)	+	AluSq	SINE/Alu	1	313	(0)	1399894
189	20.0	10.3	1.4	chr16	3843147	3843217	(86495128)	+	MIR	SINE/MIR	4	81	(181)	1399895
1928	10.9	7.8	0.0	chr16	9052586	9052870	(81285475)	C	AluSq	SINE/Alu	(4)	309	1	1410458
19	9.1	2.9	0.0	chr16	9052955	9052990	(81285355)	+	(CAAAAA)n	Simple_repeat	1	37	(0)	1410459
552	25.5	11.9	4.4	chr16	9052996	9053356	(81284989)	C	MLT1J2	LTR/ERVL-MaLR	(36)	412	20	1410460
337	19.4	5.1	1.4	chr16	9068421	9068503	(81269842)	+	MLT1J1	LTR/ERVL-MaLR	72	157	(287)	1410507
267	21.7	1.8	1.2	chr16	9068536	9068620	(81269725)	+	MLT1J1	LTR/ERVL-MaLR	269	367	(145)	1410507
20	0.0	0.0	0.0	chr16	9068735	9068756	(81269589)	+	(TA)n	Simple_repeat	1	22	(0)	1410508
803	21.9	19.8	0.4	chr16	11440241	11440492	(78897853)	+	MLT1J2	LTR/ERVL-MaLR	15	327	(121)	1415679
236	18.9	10.2	5.4	chr16	12624401	12624456	(77713889)	+	MLT1I	LTR/ERVL-MaLR	349	407	(4)	1418268
1484	17.6	3.3	4.2	chr16	12624501	12624807	(77713538)	C	AluJb	SINE/Alu	(7)	305	2	1418269
632	20.8	16.0	6.2	chr16	17288519	17288925	(73049420)	+	MLT1H	LTR/ERVL-MaLR	46	526	(23)	1428756
2345	8.3	0.7	0.7	chr16	18790551	18790839	(71547506)	C	AluSc	SINE/Alu	(14)	295	7	1431958
706	22.7	10.3	3.4	chr16	21277731	21277967	(69060378)	+	MIRb	SINE/MIR	1	260	(8)	1437563
14	21.3	0.0	0.0	chr16	21277998	21278030	(69060315)	+	(CCT)n	Simple_repeat	1	33	(0)	1437564
13	22.5	2.0	3.9	chr16	21278385	21278434	(69059911)	+	(CCCCG)n	Simple_repeat	1	51	(0)	1437565
780	13.1	3.0	1.5	chr16	21300547	21300678	(69037667)	+	LTR57	LTR/ERVL	270	403	(8)	1437613
401	11.8	4.2	0.0	chr16	21300682	21300749	(69037596)	C	LTR41B	LTR/ERVL	(581)	177	107	1437614
1254	23.9	8.6	0.0	chr16	25212970	25213266	(65125079)	+	MLT1J2	LTR/ERVL-MaLR	1	325	(123)	1446485
2167	11.1	0.0	0.0	chr16	25213319	25213598	(65124747)	C	AluSg	SINE/Alu	(29)	281	2	1446486
857	27.0	14.9	0.6	chr16	27182139	27182466	(63155879)	+	MLT1J2	LTR/ERVL-MaLR	39	421	(27)	1450564
16	18.9	2.4	0.0	chr16	28212035	28212076	(62126269)	+	G-rich	Low_complexity	1	43	(0)	1452865
190	16.5	22.9	2.1	chr16	28212245	28212337	(62126008)	C	L2a	LINE/L2	(3)	3423	3306	1452866
190	27.1	11.4	0.0	chr16	28212334	28212403	(62125942)	C	L2b	LINE/L2	(0)	3375	3297	1452867
1194	19.1	16.9	0.4	chr16	28212503	28212753	(62125592)	C	AluJo	SINE/Alu	(10)	302	2	1452868
261	28.2	3.7	0.0	chr16	28262643	28262720	(62075625)	+	L4_B_Mam	LINE/RTE-X	4461	4541	(400)	1453035
1127	25.9	10.7	2.3	chr16	28262777	28263127	(62075218)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	65	1453036
490	25.4	0.2	0.0	chr16	29270124	29270449	(61067896)	+	(TGGA)n	Simple_repeat	1	327	(0)	1455435
41	0.0	0.0	0.0	chr16	29270450	29270484	(61067861)	+	(AT)n	Simple_repeat	1	35	(0)	1455436
490	25.4	0.2	0.0	chr16	29270485	29271294	(61067051)	+	(TGGA)n	Simple_repeat	4	814	(0)	1455437
241	36.5	10.1	1.2	chr16	29943960	29944266	(60394079)	C	L2c	LINE/L2	(609)	2810	2471	1456923
1935	16.5	0.3	0.7	chr16	29944267	29944569	(60393776)	+	AluJb	SINE/Alu	1	302	(10)	1456932
197	30.6	1.4	2.7	chr16	30084094	30084167	(60254178)	C	MIR3	SINE/MIR	(127)	81	9	1457230
30	25.3	2.6	4.2	chr16	30084196	30084311	(60254034)	+	(CA)n	Simple_repeat	1	119	(0)	1457231
13	22.4	0.0	4.4	chr16	30650822	30650866	(59687479)	+	G-rich	Low_complexity	1	45	(0)	1458569
1445	15.7	4.4	9.3	chr16	31092767	31093079	(59245266)	+	AluSg	SINE/Alu	5	301	(9)	1459581
17	15.9	0.0	0.0	chr16	31093270	31093304	(59245041)	+	G-rich	Low_complexity	1	35	(0)	1459582
12	20.5	0.0	2.8	chr16	31179819	31179854	(59158491)	+	(CCCCCG)n	Simple_repeat	1	36	(0)	1459794
16	0.0	0.0	0.0	chr16	31873639	31873656	(58464689)	+	(A)n	Simple_repeat	1	18	(0)	1460887
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
377	20.6	0.0	0.0	chr16	34063794	34063861	(56274484)	+	AluYj4	SINE/Alu	224	291	(20)	1463563
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
25	22.8	2.5	2.4	chr16	50153139	50153218	(40185127)	+	G-rich	Low_complexity	1	82	(0)	1471932
43	4.3	0.0	0.0	chr16	50153489	50153536	(40184809)	+	(AGC)n	Simple_repeat	1	48	(0)	1471933
41	20.1	4.9	1.6	chr16	50153741	50153867	(40184478)	+	(CAGCGG)n	Simple_repeat	1	131	(0)	1471934
13	9.8	0.0	0.0	chr16	50153948	50153969	(40184376)	+	(CAA)n	Simple_repeat	1	22	(0)	1471935
806	28.9	12.8	2.2	chr16	51382597	51382953	(38955392)	C	MLT1J1	LTR/ERVL-MaLR	(6)	438	39	1474251
453	25.7	5.0	4.5	chr16	51501125	51501303	(38837042)	+	MLT1J2	LTR/ERVL-MaLR	232	411	(37)	1474457
569	30.9	8.0	4.3	chr16	51647494	51647932	(38690413)	C	MLT1J1	LTR/ERVL-MaLR	(2)	442	1	1474728
385	37.4	0.9	6.1	chr16	54518402	54518646	(35819699)	C	MIRb	SINE/MIR	(8)	260	29	1479676
1490	21.8	2.9	10.2	chr16	54518719	54519199	(35819146)	C	MLT1J2	LTR/ERVL-MaLR	(3)	445	1	1479677
278	25.3	14.2	3.2	chr16	55297114	55297207	(35041138)	C	MIR3	SINE/MIR	(52)	156	51	1481160
452	35.6	6.9	6.9	chr16	55297281	55297464	(35040881)	C	MLT1K	LTR/ERVL-MaLR	(75)	520	343	1481163
2517	9.6	1.7	0.6	chr16	55297465	55297822	(35040523)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	1481164
733	26.0	2.5	1.0	chr16	56310717	56310910	(34027435)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	252	1482878
2402	10.1	0.0	0.0	chr16	58648877	58649183	(31689162)	+	AluSx1	SINE/Alu	1	307	(5)	1487537
474	23.0	21.9	2.8	chr16	58649184	58649271	(31689074)	C	MER45A	DNA/hAT-Tip100	(77)	101	1	1487536
2527	6.3	0.0	0.0	chr16	58649326	58649625	(31688720)	C	AluYm1	SINE/Alu	(11)	300	1	1487538
2185	13.5	0.7	0.3	chr16	68040079	68040382	(22297963)	C	AluSx1	SINE/Alu	(7)	305	1	1502817
1970	10.8	2.2	0.8	chr16	68040950	68041217	(22297128)	+	AluSx3	SINE/Alu	2	273	(38)	1502818
18	0.0	0.0	0.0	chr16	73070711	73070730	(17267615)	+	(TC)n	Simple_repeat	1	20	(0)	1512351
21	0.0	0.0	0.0	chr16	73070916	73070938	(17267407)	+	(GC)n	Simple_repeat	1	23	(0)	1512352
640	31.2	7.5	6.7	chr16	83670270	83670640	(6667705)	C	MLT1J2	LTR/ERVL-MaLR	(2)	446	73	1531386
243	29.7	9.9	0.0	chr16	87167196	87167286	(3171059)	+	MLT1J2	LTR/ERVL-MaLR	24	124	(320)	1537926
580	23.2	12.2	4.4	chr16	87167305	87167529	(3170816)	+	MLT1J2	LTR/ERVL-MaLR	204	448	(0)	1537926
491	29.9	8.4	12.3	chr16	87580664	87580891	(2757454)	+	Kanga2_a	DNA/TcMar-Tc2	439	684	(204)	1538713
772	27.1	8.5	0.3	chr16	87580988	87581291	(2757054)	C	MLT1J2	LTR/ERVL-MaLR	(117)	331	1	1538716
560	23.1	15.4	3.1	chr16	89001687	89002074	(1336271)	C	MLT1D	LTR/ERVL-MaLR	(7)	460	36	1540685
44	0.0	0.0	0.0	chr16	89426530	89426567	(911778)	+	(CA)n	Simple_repeat	1	38	(0)	1541239
6393	10.2	3.8	1.1	chr16	89640740	89641667	(696678)	C	LTR13_	LTR/ERVK	(0)	954	1	1541593
2176	13.5	0.0	0.0	chr16	89867588	89867884	(470461)	C	AluSx1	SINE/Alu	(15)	297	1	1541999
2181	11.8	0.3	0.0	chr17	2484496	2484791	(80772650)	C	AluSq2	SINE/Alu	(14)	299	3	1549206
3187	12.7	4.5	1.8	chr17	2484986	2485499	(80771942)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1549207
1914	11.9	2.0	0.0	chr17	4389547	4389839	(78867602)	C	AluSx	SINE/Alu	(12)	300	2	1552940
287	32.9	10.3	2.8	chr17	4730608	4730857	(78526584)	+	L2	LINE/L2	2795	3065	(354)	1553635
1913	9.8	1.8	0.0	chr17	4730911	4731186	(78526255)	+	AluSx1	SINE/Alu	15	295	(17)	1553636
697	26.4	3.0	0.8	chr17	7174610	7176778	(76080663)	+	(CA)n	Simple_repeat	1	2233	(0)	1558389
779	1.2	0.0	0.0	chr17	8138878	8138962	(75118479)	C	tRNA-Ser-TCG	tRNA	(0)	85	1	1560170
13	0.0	14.3	0.0	chr17	8139020	8139047	(75118394)	+	(CCGGCT)n	Simple_repeat	1	32	(0)	1560171
906	28.8	7.1	3.1	chr17	13550245	13550634	(69706807)	+	MLT1J1	LTR/ERVL-MaLR	3	409	(35)	1569954
329	24.7	8.2	9.3	chr17	13550636	13550707	(69706734)	C	MER96B	DNA/hAT-Tip100	(0)	417	351	1569955
32	0.0	3.0	0.0	chr17	13550708	13550740	(69706701)	+	(AAC)n	Simple_repeat	1	34	(0)	1569956
329	24.7	8.2	9.3	chr17	13550741	13550786	(69706655)	C	MER96B	DNA/hAT-Tip100	(67)	350	299	1569955
2364	9.6	0.3	0.0	chr17	16868578	16868879	(66388562)	+	AluSx1	SINE/Alu	1	303	(9)	1575691
395	26.7	12.1	5.9	chr17	16868925	16869163	(66388278)	C	MLT1J	LTR/ERVL-MaLR	(46)	466	211	1575692
1245	13.9	5.1	9.0	chr17	16869191	16869435	(66388006)	C	AluJr	SINE/Alu	(77)	235	1	1575693
1548	25.5	8.9	0.9	chr17	21126195	21126741	(62130700)	C	L1M5	LINE/L1	(854)	5292	4698	1583713
953	30.3	12.4	3.4	chr17	21330209	21330851	(61926590)	+	MLT1J2-int	LTR/ERVL-MaLR	666	1374	(13)	1584083
406	27.5	6.6	1.5	chr17	21331070	21331255	(61926186)	+	MLT1J2	LTR/ERVL-MaLR	263	444	(0)	1584083
2485	8.4	0.0	0.0	chr17	21331302	21331611	(61925830)	C	AluSq10	SINE/Alu	(3)	310	1	1584084
2272	8.8	0.0	0.0	chr17	21756449	21756732	(61500709)	+	AluSq10	SINE/Alu	1	284	(29)	1584758
35	0.0	2.8	0.0	chr17	21756733	21756768	(61500673)	+	(AAAAT)n	Simple_repeat	1	37	(0)	1584759
488	30.7	8.0	6.2	chr17	21756815	21757164	(61500277)	C	MLT1H1	LTR/ERVL-MaLR	(0)	448	71	1584760
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
354	19.1	1.6	0.0	chr17	26879386	26879448	(56377993)	+	AluYj4	SINE/Alu	224	287	(24)	1585979
14076	21.5	0.2	0.1	chr17	26879448	26880125	(56377316)	+	(TGGAA)n	Simple_repeat	1	678	(0)	1585980
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26935986	26936392	(56321049)	+	(GAATG)n	Satellite	1	409	(0)	1585984
1545	18.6	0.5	0.9	chr17	26937237	26937936	(56319505)	+	(GAATG)n	Satellite	5	705	(0)	1585990
395	19.4	1.6	0.0	chr17	26937941	26938002	(56319439)	+	AluSc	SINE/Alu	223	285	(24)	1585991
1545	18.6	0.5	0.9	chr17	26938006	26938444	(56318997)	+	(GAATG)n	Satellite	3	440	(0)	1585992
13	4.3	3.9	3.7	chr17	29180178	29180203	(54077238)	+	(AGG)n	Simple_repeat	1	27	(0)	1590036
17	13.9	0.0	6.7	chr17	29180394	29180438	(54077003)	+	(AGCGC)n	Simple_repeat	1	45	(0)	1590037
18	18.9	3.5	3.3	chr17	29293713	29293774	(53963667)	+	(CCCCATC)n	Simple_repeat	1	62	(0)	1590287
41	32.5	0.0	0.0	chr17	29293893	29294029	(53963412)	+	(TGG)n	Simple_repeat	1	137	(0)	1590288
23	18.9	3.5	5.6	chr17	31095059	31095145	(52162296)	+	(CCCCCT)n	Simple_repeat	1	90	(0)	1593994
21	6.7	0.0	0.0	chr17	31095479	31095510	(52161931)	+	(GGAAG)n	Simple_repeat	1	32	(0)	1593995
12	30.2	7.3	0.0	chr17	31095511	31095557	(52161884)	+	GA-rich	Low_complexity	4	88	(0)	1593996
478	29.8	4.7	1.6	chr17	31448811	31448994	(51808447)	+	MIRb	SINE/MIR	22	211	(57)	1594592
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
771	23.9	2.8	0.0	chr17	36077251	36077426	(47180015)	C	MER5A	DNA/hAT-Charlie	(0)	189	9	1603363
270	29.4	5.8	1.3	chr17	36077441	36077651	(47179790)	C	MLT1I	LTR/ERVL-MaLR	(119)	329	63	1603364
12	20.7	4.3	2.1	chr17	36722506	36722551	(46534890)	+	G-rich	Low_complexity	1	48	(0)	1604499
12	16.8	2.8	2.7	chr17	37359157	37359192	(45898249)	+	(CCCGCC)n	Simple_repeat	1	37	(0)	1605676
19	6.2	5.9	0.0	chr17	37359406	37359439	(45898002)	+	(GGGC)n	Simple_repeat	1	36	(0)	1605677
454	30.4	9.0	6.8	chr17	38663107	38663530	(44593911)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	15	1608304
2518	6.4	0.0	0.0	chr17	39199335	39199631	(44057810)	C	AluSz	SINE/Alu	(15)	297	1	1609532
181	33.0	5.1	7.4	chr17	39199668	39199788	(44057653)	C	L2a	LINE/L2	(0)	3426	3309	1609533
17	24.6	2.3	0.0	chr17	39461509	39461552	(43795889)	+	(GT)n	Simple_repeat	1	45	(0)	1610148
28	19.9	2.6	2.5	chr17	41865324	41865401	(41392040)	+	(GCC)n	Simple_repeat	1	80	(0)	1614463
22	14.9	0.0	0.0	chr17	41865834	41865870	(41391571)	+	(T)n	Simple_repeat	1	37	(0)	1614464
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
12	31.5	1.8	0.0	chr17	44830311	44830365	(38427076)	+	G-rich	Low_complexity	1	56	(0)	1620809
647	23.7	5.5	0.0	chr17	45321391	45321529	(37935912)	+	MER63B	DNA/hAT-Blackjack	290	436	(0)	1621790
418	22.5	15.2	0.0	chr17	45675632	45675764	(37581677)	C	MIRb	SINE/MIR	(43)	219	57	1622569
326	20.9	6.5	1.2	chr17	45675803	45675930	(37581511)	C	MLT1J2	LTR/ERVL-MaLR	(41)	471	269	1622570
966	20.4	7.8	1.0	chr17	45675945	45676147	(37581294)	C	MER58A	DNA/hAT-Charlie	(2)	222	5	1622571
394	27.1	1.6	0.0	chr17	47649133	47649257	(35608184)	+	MIR3	SINE/MIR	61	182	(26)	1626487
1768	15.3	0.0	2.7	chr17	47888224	47888523	(35368918)	C	AluSx3	SINE/Alu	(18)	293	2	1626892
250	29.0	2.5	1.3	chr17	47888572	47888673	(35368768)	+	MIR3	SINE/MIR	59	161	(107)	1626893
12	29.9	4.6	0.0	chr17	48586185	48586249	(34671192)	+	GA-rich	Low_complexity	1	68	(0)	1628121
29	20.6	0.0	1.6	chr17	49678022	49678084	(33579357)	+	(AC)n	Simple_repeat	1	63	(0)	1630372
12	19.9	0.0	0.0	chr17	49707873	49707901	(33549540)	+	(CGG)n	Simple_repeat	1	29	(0)	1630436
320	32.3	7.8	1.7	chr17	58692985	58693195	(24564246)	C	MIRb	SINE/MIR	(14)	254	31	1645544
4129	16.0	1.1	3.9	chr17	58786314	58786724	(24470717)	C	MER44C	DNA/TcMar-Tigger	(338)	395	1	1645771
204	27.6	17.0	7.3	chr17	59564987	59565123	(23692318)	C	L2a	LINE/L2	(10)	3416	3264	1647534
208	18.8	4.1	0.0	chr17	59565188	59565236	(23692205)	+	MIRc	SINE/MIR	61	108	(100)	1647535
3395	25.7	8.3	1.1	chr17	60037040	60038031	(23219410)	C	L1MD2	LINE/L1	(5514)	1126	54	1648461
409	28.0	10.0	2.9	chr17	63849712	63850066	(19407375)	C	L2a	LINE/L2	(51)	3375	3000	1655453
1031	23.0	12.6	7.5	chr17	64032046	64032436	(19225005)	+	MLT1H	LTR/ERVL-MaLR	1	441	(48)	1655799
28	0.0	0.0	0.0	chr17	64032437	64032463	(19224978)	+	(TTTG)n	Simple_repeat	1	27	(0)	1655800
816	28.9	6.0	3.1	chr17	66524922	66525210	(16732231)	+	MLT1H	LTR/ERVL-MaLR	13	310	(239)	1660412
1010	17.5	3.2	0.0	chr17	73580507	73580689	(9676752)	+	MER45R	DNA/hAT-Tip100	1	189	(1392)	1672587
450	26.8	1.6	2.3	chr17	73580678	73580718	(9676723)	+	MER45B	DNA/hAT-Tip100	910	950	(90)	1672588
777	19.9	8.5	6.5	chr17	73580719	73580905	(9676536)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	44	1672589
1113	28.6	6.5	5.4	chr17	74392943	74393385	(8864056)	+	MLT1J2	LTR/ERVL-MaLR	1	448	(0)	1674067
625	24.3	5.5	0.5	chr17	74454492	74454698	(8802743)	C	MER20	DNA/hAT-Charlie	(0)	219	2	1674186
471	27.3	3.6	0.6	chr17	77233458	77233619	(6023822)	C	L2a	LINE/L2	(308)	3118	2952	1679690
299	31.2	6.1	10.7	chr17	77233707	77233997	(6023444)	+	MLT1J2	LTR/ERVL-MaLR	135	448	(0)	1679691
600	27.2	14.1	7.2	chr17	77948711	77949071	(5308370)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	59	1680943
2526	7.5	0.0	0.0	chr17	78788157	78788462	(4468979)	C	AluSc	SINE/Alu	(3)	306	1	1682459
29	0.0	0.0	0.0	chr17	81222297	81222323	(2035118)	+	(CTGACC)n	Simple_repeat	1	27	(0)	1686007
406	26.6	0.0	1.7	chr17	81472162	81472276	(1785165)	+	MLT1K	LTR/ERVL-MaLR	153	265	(330)	1686275
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
2213	11.1	1.0	0.0	chr17	82586620	82586916	(670525)	+	AluSp	SINE/Alu	1	300	(13)	1687926
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
2207	10.6	0.3	1.3	chr18	2660473	2660773	(77712512)	C	AluSq2	SINE/Alu	(11)	302	5	1693049
3579	7.9	1.5	0.0	chr18	2660883	2661350	(77711935)	+	L1PA8	LINE/L1	5697	6171	(1)	1693050
17	18.7	2.5	8.6	chr18	21704672	21704750	(58668535)	+	G-rich	Low_complexity	1	81	(0)	1713147
400	34.3	9.6	0.6	chr18	23144544	23144722	(57228563)	C	MIRb	SINE/MIR	(46)	222	26	1715700
2058	13.3	0.6	4.6	chr18	23277136	23277505	(57095780)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1715914
848	19.8	18.6	2.5	chr18	23277506	23277590	(57095695)	C	MLT1H	LTR/ERVL-MaLR	(219)	330	246	1715913
792	20.4	11.0	6.3	chr18	23277595	23277917	(57095368)	C	MER31B	LTR/ERV1	(4)	510	1	1715915
1080	21.0	16.0	6.7	chr18	24485215	24485664	(55887621)	+	MLT1H	LTR/ERVL-MaLR	46	545	(4)	1718044
931	28.7	9.1	0.9	chr18	25874710	25875050	(54498235)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	77	1719943
452	20.4	6.0	5.7	chr18	27169924	27170112	(53203173)	+	L1ME3D	LINE/L1	5872	6068	(174)	1722043
814	28.6	7.2	4.2	chr18	27170183	27170489	(53202796)	+	MLT1J2	LTR/ERVL-MaLR	125	441	(7)	1722044
368	28.7	1.0	0.0	chr18	27170494	27170594	(53202691)	+	L1ME3D	LINE/L1	6088	6189	(53)	1722043
24	22.9	2.7	1.3	chr18	28176821	28176893	(52196392)	+	(GCGGC)n	Simple_repeat	1	75	(0)	1723415
15	17.1	2.4	2.4	chr18	28176906	28176946	(52196339)	+	(CCCCG)n	Simple_repeat	1	42	(0)	1723416
15	14.7	6.2	2.0	chr18	28177023	28177057	(52196228)	+	GA-rich	Low_complexity	1	37	(0)	1723417
28	0.0	0.0	0.0	chr18	28177058	28177083	(52196202)	+	(GGC)n	Simple_repeat	1	26	(0)	1723418
15	14.7	6.2	2.0	chr18	28177084	28177095	(52196190)	+	GA-rich	Low_complexity	38	49	(0)	1723419
12	30.1	0.0	3.5	chr18	28177146	28177202	(52196083)	+	(CCCCGCT)n	Simple_repeat	1	57	(0)	1723420
477	31.2	6.8	0.5	chr18	31497179	31497371	(48875914)	C	MIRb	SINE/MIR	(8)	260	55	1727743
26	24.3	0.7	8.7	chr18	31498127	31498195	(48875090)	+	G-rich	Low_complexity	1	105	(33)	1727744
17	9.6	8.3	3.9	chr18	31498196	31498243	(48875042)	+	(CGG)n	Simple_repeat	1	52	(0)	1727745
26	24.3	0.7	8.7	chr18	31498244	31498263	(48875022)	+	G-rich	Low_complexity	106	138	(0)	1727744
876	26.6	12.2	3.7	chr18	32734140	32734514	(47638771)	+	MLT1I	LTR/ERVL-MaLR	1	411	(0)	1729806
16	30.8	1.5	2.9	chr18	34224768	34224834	(46148451)	+	(TG)n	Simple_repeat	1	68	(0)	1731666
23	15.2	3.1	4.5	chr18	34224917	34224929	(46148356)	+	(CCCCT)n	Simple_repeat	1	29	(40)	1731667
13	21.5	4.7	0.0	chr18	34224930	34224972	(46148313)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	1731668
23	15.2	3.1	4.5	chr18	34224973	34224987	(46148298)	+	(CCCCT)n	Simple_repeat	30	69	(0)	1731667
297	34.2	10.4	4.8	chr18	34626881	34627089	(45746196)	+	MamSINE1	SINE/tRNA-RTE	1	222	(68)	1732198
1049	29.2	8.3	2.3	chr18	36353746	36354131	(44019154)	C	MLT1J2	LTR/ERVL-MaLR	(17)	431	21	1734682
205	18.6	0.3	0.0	chr18	46546273	46546655	(33826630)	+	(CATTC)n	Satellite	1	384	(0)	1748842
542	27.7	21.2	1.0	chr18	48621060	48621457	(31751828)	C	L2a	LINE/L2	(2)	3424	2925	1752205
526	29.6	13.7	1.0	chr18	48621469	48621857	(31751428)	C	L2a	LINE/L2	(1161)	2258	1813	1752205
14	6.8	9.7	0.0	chr18	48902043	48902073	(31471212)	+	(GCAG)n	Simple_repeat	1	34	(0)	1752634
273	30.7	1.1	1.1	chr18	51204570	51204658	(29168627)	C	Charlie4z	DNA/hAT-Charlie	(62)	105	17	1756530
628	17.2	11.4	0.0	chr18	51204684	51204799	(29168486)	+	MLT1J1	LTR/ERVL-MaLR	9	139	(305)	1756531
366	33.2	7.4	4.9	chr18	51204834	51205058	(29168227)	+	MLT1J1	LTR/ERVL-MaLR	208	438	(10)	1756531
312	29.1	4.5	0.8	chr18	58290881	58291012	(22082273)	C	MLT1I	LTR/ERVL-MaLR	(25)	419	246	1767080
374	31.9	4.8	4.2	chr18	58291260	58291426	(22081859)	C	MLT1I	LTR/ERVL-MaLR	(230)	181	14	1767080
229	30.0	9.8	2.6	chr18	58419440	58419552	(21953733)	+	L2b	LINE/L2	3254	3375	(0)	1767211
470	15.4	0.2	0.4	chr18	58419553	58420358	(21952927)	+	(GGAT)n	Simple_repeat	1	808	(0)	1767212
864	25.5	10.9	5.9	chr18	58601381	58601867	(21771418)	+	MLT1H	LTR/ERVL-MaLR	12	525	(24)	1767511
781	24.7	2.1	0.5	chr18	58601868	58602058	(21771227)	C	MER20	DNA/hAT-Charlie	(1)	218	25	1767512
1714	26.6	9.7	9.3	chr18	74617198	74618378	(5754907)	C	L1MC4	LINE/L1	(138)	7904	6719	1790144
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
1111	19.1	0.5	0.0	chr19	442151	444212	(58173404)	+	(TGGA)n	Simple_repeat	1	2072	(0)	1796915
1003	24.5	1.3	0.1	chr19	464958	467296	(58150320)	+	(GGAT)n	Simple_repeat	1	2369	(0)	1796963
246	35.7	2.1	0.9	chr19	816045	817070	(57800546)	+	(CACC)n	Simple_repeat	1	1048	(0)	1797650
247	32.6	0.0	0.0	chr19	1028116	1028201	(57589415)	C	MIRc	SINE/MIR	(140)	128	43	1798103
15	24.6	1.9	1.9	chr19	1028682	1028743	(57588873)	+	G-rich	Low_complexity	1	62	(0)	1798104
535	21.8	0.7	0.4	chr19	1549368	1550492	(57067124)	+	(ATCC)n	Simple_repeat	1	1133	(0)	1799001
509	28.3	1.8	1.5	chr19	1716744	1718327	(56899289)	+	(ATGG)n	Simple_repeat	1	1612	(0)	1799376
405	15.3	2.2	0.0	chr19	2024472	2024554	(56593062)	+	MLT1H1	LTR/ERVL-MaLR	412	501	(54)	1799973
1095	18.7	0.5	0.0	chr19	2024555	2024763	(56592853)	+	LTR26D	LTR/ERV1	1	210	(394)	1799978
1717	16.0	6.3	0.4	chr19	2385587	2385867	(56231749)	+	AluJb	SINE/Alu	1	299	(13)	1800675
2057	11.5	1.4	0.7	chr19	2997048	2997333	(55620283)	+	AluSx	SINE/Alu	2	289	(23)	1802125
413	22.2	1.0	0.8	chr19	3322257	3323187	(55294429)	+	(TGGA)n	Simple_repeat	1	940	(0)	1802928
339	21.6	2.4	0.7	chr19	3776208	3776999	(54840617)	+	(TGGA)n	Simple_repeat	1	811	(0)	1804005
431	21.8	0.7	0.3	chr19	3923404	3924316	(54693300)	+	(ATGG)n	Simple_repeat	1	919	(0)	1804355
1021	27.6	9.7	3.8	chr19	4139518	4140150	(54477466)	C	L2a	LINE/L2	(238)	3188	2499	1804841
2093	10.5	3.6	0.7	chr19	4140152	4140447	(54477169)	+	AluSx1	SINE/Alu	1	305	(7)	1804845
525	21.0	2.7	0.2	chr19	4334372	4335564	(54282052)	+	(CCAT)n	Simple_repeat	1	1225	(0)	1805380
615	24.6	1.7	0.6	chr19	4602191	4603634	(54013982)	+	(GGAT)n	Simple_repeat	1	1459	(0)	1805978
184	25.9	5.8	5.8	chr19	5680276	5680361	(52937255)	+	MIR3	SINE/MIR	86	171	(37)	1808576
11	24.2	2.6	0.0	chr19	5720827	5720865	(52896751)	+	G-rich	Low_complexity	1	40	(0)	1808644
2563	4.0	0.0	1.3	chr19	5720998	5721301	(52896315)	C	AluY	SINE/Alu	(11)	300	1	1808645
954	26.3	15.0	3.4	chr19	6680369	6680754	(51936862)	+	MLT1J1	LTR/ERVL-MaLR	2	440	(4)	1810897
732	25.1	6.3	1.0	chr19	7104273	7104497	(51513119)	C	LTR16	LTR/ERVL	(220)	231	1	1812006
1915	12.6	0.0	7.5	chr19	10503658	10503991	(48113625)	C	AluJr	SINE/Alu	(1)	311	3	1819921
1574	20.2	4.0	9.9	chr19	11814743	11814993	(46802623)	C	LTR10B1	LTR/ERV1	(0)	547	295	1823182
844	23.1	14.3	2.1	chr19	12440152	12440636	(46176980)	+	LTR26E	LTR/ERV1	1	622	(0)	1824454
2193	8.4	2.0	1.7	chr19	12441380	12441676	(46175940)	C	AluSg	SINE/Alu	(11)	299	2	1824455
11	19.5	3.9	5.6	chr19	12484382	12484433	(46133183)	+	G-rich	Low_complexity	1	54	(0)	1824522
1018	24.0	3.7	6.2	chr19	13401518	13401844	(45215772)	+	MLT1J1	LTR/ERVL-MaLR	63	355	(89)	1826662
839	18.2	0.0	0.0	chr19	13401845	13401976	(45215640)	C	AluJo	SINE/Alu	(180)	132	1	1826663
1018	24.2	5.0	9.9	chr19	13401977	13402074	(45215542)	+	MLT1J1	LTR/ERVL-MaLR	356	444	(0)	1826662
269	19.7	1.6	1.6	chr19	13706210	13706271	(44911345)	+	MLT1J2	LTR/ERVL-MaLR	67	128	(320)	1827554
245	30.4	15.8	0.0	chr19	13706387	13706498	(44911118)	+	MLT1J2	LTR/ERVL-MaLR	283	415	(29)	1827554
316	27.3	10.4	5.0	chr19	13706528	13706708	(44910908)	C	LTR84b	LTR/ERVL	(499)	262	71	1827555
11	24.1	0.0	0.0	chr19	13826303	13826336	(44791280)	+	(GGCTGA)n	Simple_repeat	1	34	(0)	1827910
1934	12.9	0.3	6.4	chr19	14052590	14052915	(44564701)	+	AluJr	SINE/Alu	7	312	(0)	1828459
626	25.2	16.5	3.8	chr19	14052924	14053274	(44564342)	+	MLT1J2	LTR/ERVL-MaLR	74	448	(0)	1828460
2013	9.0	1.7	5.7	chr19	17225717	17226016	(41391600)	+	AluSz	SINE/Alu	1	288	(24)	1835790
602	21.1	4.9	1.9	chr19	17411993	17412151	(41205465)	+	MER20	DNA/hAT-Charlie	56	219	(0)	1836270
446	21.8	0.8	0.2	chr19	18083629	18084269	(40533347)	+	(CCAT)n	Simple_repeat	4	647	(0)	1838046
231	17.5	1.6	0.0	chr19	18084279	18084341	(40533275)	C	L1ME2z	LINE/L1	(126)	6318	6255	1838047
446	21.8	0.8	0.2	chr19	18084349	18084781	(40532835)	+	(CCAT)n	Simple_repeat	4	438	(0)	1838048
202	28.0	9.4	5.3	chr19	19203083	19203214	(39414402)	+	MIRb	SINE/MIR	34	171	(97)	1840488
19794	13.2	4.8	1.3	chr19	21946631	21950488	(36667128)	+	LTR25-int	LTR/ERV1	1	4127	(3061)	1844728
3683	17.6	3.0	2.1	chr19	29687597	29687914	(28929702)	C	L1MB7	LINE/L1	(1)	6183	5876	1850638
2241	10.5	1.0	0.0	chr19	29687915	29688210	(28929406)	C	AluSz	SINE/Alu	(13)	299	1	1850639
1233	20.9	3.6	1.8	chr19	29690947	29691219	(28926397)	C	MLT1A	LTR/ERVL-MaLR	(7)	367	90	1850644
2157	11.4	1.9	5.7	chr19	29691227	29691437	(28926179)	C	THE1B	LTR/ERVL-MaLR	(6)	358	159	1850645
411	23.5	0.0	8.5	chr19	33373111	33373240	(25244376)	+	SVA_E	Retroposon/SVA	194	312	(1070)	1856705
767	12.5	0.0	0.9	chr19	33373142	33373253	(25244363)	C	AluJo	SINE/Alu	(196)	116	6	1856706
321	29.9	5.0	0.7	chr19	35608260	35608394	(23009222)	+	L2b	LINE/L2	3021	3161	(265)	1860762
672	24.8	13.6	3.5	chr19	35608431	35608660	(23008956)	+	MLT1J2	LTR/ERVL-MaLR	65	321	(127)	1860763
838	26.6	12.5	0.7	chr19	36128478	36128765	(22488851)	+	LTR10B	LTR/ERV1	179	505	(0)	1861928
397	31.3	5.0	1.4	chr19	36837749	36837962	(21779654)	+	L2	LINE/L2	1826	2047	(1372)	1863351
41	2.6	0.0	0.0	chr19	36838107	36838146	(21779470)	+	(CA)n	Simple_repeat	1	40	(0)	1863352
200	21.1	13.6	0.0	chr19	38267287	38267343	(20350273)	C	L2a	LINE/L2	(1883)	1536	1471	1866265
1399	26.2	19.7	0.1	chr19	38267372	38268154	(20349462)	C	L2a	LINE/L2	(2200)	1219	246	1866265
272	29.1	13.0	1.5	chr19	42219825	42219960	(16397656)	C	MIRb	SINE/MIR	(18)	250	97	1874830
617	19.8	0.8	0.0	chr19	43181754	43181869	(15435747)	C	L1MCa	LINE/L1	(6391)	117	1	1876352
1913	21.2	4.5	7.2	chr19	43182008	43182757	(15434859)	+	LTR8B	LTR/ERV1	20	818	(2)	1876354
2297	8.0	1.7	0.0	chr19	43200584	43200869	(15416747)	C	AluY	SINE/Alu	(20)	291	1	1876377
394	21.0	15.2	0.0	chr19	43200870	43200969	(15416647)	C	L1MCa	LINE/L1	(6390)	118	1	1876376
3302	19.7	8.2	4.2	chr19	43201101	43201872	(15415744)	+	LTR8B	LTR/ERV1	13	818	(2)	1876378
276	27.6	7.0	4.6	chr19	46413580	46413731	(12203885)	C	LTR104_Mam	LTR/Gypsy	(698)	811	656	1883596
2449	7.3	0.0	1.0	chr19	47261737	47262037	(11355579)	+	AluSq2	SINE/Alu	2	299	(14)	1885689
384	31.5	9.5	6.2	chr19	47262051	47262210	(11355406)	C	MLT1J	LTR/ERVL-MaLR	(11)	437	288	1885690
2337	11.8	0.0	0.0	chr19	47262211	47262516	(11355100)	C	AluSz6	SINE/Alu	(6)	306	1	1885691
2412	7.2	0.0	2.3	chr19	47355567	47355873	(11261743)	+	AluY	SINE/Alu	1	300	(11)	1885960
489	28.1	4.7	1.2	chr19	47355874	47356004	(11261612)	C	MLT1J2	LTR/ERVL-MaLR	(47)	401	263	1885959
1311	16.4	2.3	0.0	chr19	47356011	47356224	(11261392)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1885961
1239	17.1	2.3	0.0	chr19	47357449	47357659	(11259957)	+	MER20	DNA/hAT-Charlie	4	219	(0)	1885966
372	28.6	4.8	0.0	chr19	47357660	47357757	(11259859)	+	MLT1J2	LTR/ERVL-MaLR	257	359	(89)	1885967
380	21.9	2.4	0.0	chr19	47358225	47358306	(11259310)	C	MIR	SINE/MIR	(162)	100	17	1885968
4238	11.4	5.7	3.4	chr19	48107461	48108186	(10509430)	+	LTR13	LTR/ERVK	261	1003	(4)	1887964
659	19.8	9.5	1.2	chr19	48405558	48405721	(10211895)	+	MER104	DNA/TcMar-Tc2	1	179	(2)	1888675
204	36.1	5.5	3.7	chr19	48405722	48405736	(10211880)	+	MIRc	SINE/MIR	226	239	(29)	1888674
277	28.6	10.9	3.3	chr19	48405743	48405894	(10211722)	C	MLT1J	LTR/ERVL-MaLR	(29)	483	319	1888676
25	12.8	3.9	0.0	chr19	48716738	48716788	(9900828)	+	GA-rich	Low_complexity	1	53	(0)	1889456
362	24.4	9.8	0.0	chr19	49493245	49493400	(9124216)	+	L1M4	LINE/L1	5104	5282	(864)	1891212
2460	9.3	0.0	0.0	chr19	49493401	49493712	(9123904)	+	AluSx1	SINE/Alu	1	312	(0)	1891213
12	11.7	10.8	0.0	chr19	49513504	49513540	(9104076)	+	(GCAG)n	Simple_repeat	1	41	(0)	1891261
30	35.6	2.2	0.0	chr19	49513652	49513789	(9103827)	+	(CT)n	Simple_repeat	1	141	(0)	1891262
950	21.1	0.5	1.9	chr19	49532976	49533183	(9084433)	C	MIR	SINE/MIR	(44)	218	14	1891316
34	23.8	0.0	5.3	chr19	49746667	49746780	(8870836)	+	(CTCCTG)n	Simple_repeat	1	114	(0)	1891842
455	23.3	6.8	0.0	chr19	50158494	50158643	(8458973)	C	ORSL-2a	DNA/hAT-Tip100	(80)	262	102	1892806
640	25.2	15.4	1.2	chr19	50158690	50159016	(8458600)	+	MLT1J1	LTR/ERVL-MaLR	38	434	(14)	1892807
447	14.3	0.0	0.0	chr19	55363436	55363505	(3254111)	+	Alu	SINE/Alu	221	290	(21)	1903581
1533	8.1	14.0	0.0	chr19	55363639	55363847	(3253769)	C	AluSp	SINE/Alu	(70)	243	1	1903582
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
19	15.9	2.4	0.0	chr19	56595157	56595198	(2022418)	+	(GCTCG)n	Simple_repeat	1	43	(0)	1906049
545	34.4	4.6	0.3	chr19	57279572	57279886	(1337730)	+	L2a	LINE/L2	2201	2529	(890)	1907552
474	29.4	9.5	4.2	chr2	3160815	3161173	(239032356)	C	MLT1J2	LTR/ERVL-MaLR	(0)	444	66	1914142
1142	28.3	11.0	1.5	chr2	4353906	4354641	(237838888)	+	L1MCc	LINE/L1	935	1832	(5296)	1915632
593	23.9	10.8	9.6	chr2	4354646	4354927	(237838602)	+	LTR41	LTR/ERVL	3	288	(480)	1915635
1363	22.4	14.5	2.1	chr2	9817685	9818192	(232375337)	+	L1ME3A	LINE/L1	5592	6235	(7)	1923705
449	26.4	8.8	0.0	chr2	9818224	9818378	(232375151)	+	MLT1J2	LTR/ERVL-MaLR	215	384	(64)	1923706
17	10.3	0.0	5.6	chr2	9818408	9818443	(232375086)	+	GA-rich	Low_complexity	1	36	(0)	1923707
581	29.9	9.3	5.0	chr2	11145553	11145851	(231047678)	+	MLT1J2	LTR/ERVL-MaLR	37	349	(99)	1926111
236	30.3	8.1	4.3	chr2	11145908	11146086	(231047443)	C	MIRc	SINE/MIR	(52)	216	22	1926112
422	30.6	8.4	3.1	chr2	20093494	20093719	(222099810)	C	MamGypLTR1a	LTR/Gypsy	(151)	633	395	1939742
14	4.9	0.0	0.0	chr2	20291075	20291095	(221902434)	+	(AAT)n	Simple_repeat	1	21	(0)	1940073
815	21.6	1.7	2.2	chr2	23678375	23678554	(218514975)	+	MLT1H	LTR/ERVL-MaLR	189	367	(182)	1944685
2601	14.0	6.9	0.5	chr2	23678614	23679058	(218514471)	+	L1MB2	LINE/L1	5696	6171	(0)	1944686
353	25.2	11.5	9.7	chr2	25101092	25101354	(217092175)	C	MLT1J	LTR/ERVL-MaLR	(38)	474	136	1947302
20	13.8	0.0	7.3	chr2	27429023	27429077	(214764452)	+	G-rich	Low_complexity	1	55	(0)	1951815
25	16.9	4.3	2.7	chr2	28392701	28392770	(213800759)	+	(CCT)n	Simple_repeat	1	73	(0)	1953484
25	27.4	4.2	0.0	chr2	28392892	28392933	(213800596)	+	(CGAG)n	Simple_repeat	1	71	(29)	1953485
23	11.2	0.0	0.0	chr2	28392934	28392972	(213800557)	+	(GAGAGA)n	Simple_repeat	1	39	(0)	1953486
25	27.4	4.2	0.0	chr2	28392973	28392987	(213800542)	+	(CGAG)n	Simple_repeat	72	100	(0)	1953485
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
530	31.1	10.4	4.6	chr2	44247886	44248328	(197945201)	C	MLT1J2	LTR/ERVL-MaLR	(4)	444	1	1978890
268	21.2	18.7	0.0	chr2	44248329	44248440	(197945089)	+	Helitron3Na_Mam	RC/Helitron	180	317	(169)	1978891
3266	21.1	3.9	5.5	chr2	44248441	44248595	(197944934)	+	L1ME2z	LINE/L1	5436	5592	(852)	1978892
17	4.9	0.0	0.0	chr2	46915807	46915865	(195277664)	+	(C)n	Simple_repeat	1	59	(0)	1983050
211	17.1	0.0	0.0	chr2	54331167	54331201	(187862328)	C	MIRb	SINE/MIR	(12)	256	222	1994183
892	25.7	16.4	1.0	chr2	54331220	54331605	(187861924)	+	L2a	LINE/L2	2548	3004	(415)	1994184
23	26.6	1.2	2.4	chr2	54456068	54456153	(187737376)	+	G-rich	Low_complexity	1	85	(0)	1994401
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
611	20.4	6.4	5.2	chr2	60427867	60428021	(181765508)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	292	2002445
12	4.5	4.0	3.9	chr2	61694637	61694661	(180498868)	+	(AGG)n	Simple_repeat	1	26	(0)	2004961
13	20.4	0.0	2.8	chr2	61694805	61694840	(180498689)	+	G-rich	Low_complexity	1	36	(0)	2004962
654	29.2	12.4	1.9	chr2	70575863	70576180	(171617349)	+	MLT1J1	LTR/ERVL-MaLR	65	420	(24)	2019313
495	25.9	6.2	0.6	chr2	70871902	70872068	(171321461)	+	MIRb	SINE/MIR	4	180	(88)	2019756
410	31.7	1.6	0.8	chr2	70900986	70901106	(171292423)	C	L2b	LINE/L2	(2)	3373	3252	2019792
361	34.3	9.5	0.7	chr2	74148358	74148636	(168044893)	C	L2	LINE/L2	(589)	2830	2525	2024871
993	17.6	0.0	0.6	chr2	74197984	74198148	(167995381)	C	AluJb	SINE/Alu	(6)	306	143	2024985
314	12.7	1.8	0.0	chr2	74198162	74198216	(167995313)	C	L1MC4	LINE/L1	(868)	7174	7119	2024984
290	15.7	1.8	2.8	chr2	74198223	74198296	(167995233)	+	L2a	LINE/L2	3313	3426	(0)	2024986
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
338	29.5	5.7	8.6	chr2	98465558	98465651	(143727878)	C	MIRb	SINE/MIR	(82)	186	94	2055051
2453	10.6	0.0	0.0	chr2	98466034	98466345	(143727184)	C	AluSz	SINE/Alu	(0)	312	1	2055053
937	29.8	4.8	2.4	chr2	101188967	101189376	(141004153)	+	MLT1J1	LTR/ERVL-MaLR	4	423	(21)	2059135
3947	14.1	7.5	0.6	chr2	101189474	101190115	(141003414)	+	MER21B	LTR/ERVL	1	690	(178)	2059136
648	30.6	3.5	9.6	chr2	104036721	104037114	(138156415)	C	MLT1I	LTR/ERVL-MaLR	(3)	408	40	2062993
2488	6.0	3.0	1.7	chr2	108533411	108533709	(133659820)	C	AluSp	SINE/Alu	(10)	303	1	2069391
48	25.5	2.9	4.7	chr2	108534262	108534469	(133659060)	+	(CGCCC)n	Simple_repeat	1	214	(0)	2069392
2169	10.5	0.0	4.8	chr2	112632304	112632616	(129560913)	C	AluSc	SINE/Alu	(11)	298	1	2075457
609	26.5	11.6	4.2	chr2	117753791	117754101	(124439428)	+	MLT1I	LTR/ERVL-MaLR	9	345	(66)	2082724
1589	17.8	4.7	0.9	chr2	117754104	117754432	(124439097)	C	L1ME2z	LINE/L1	(1)	6443	6102	2082725
378	25.0	8.9	1.4	chr2	118856131	118856276	(123337253)	+	MIR3	SINE/MIR	34	191	(17)	2084340
902	30.4	13.0	2.8	chr2	120424170	120424664	(121768865)	+	MLT1H1	LTR/ERVL-MaLR	3	555	(0)	2086942
526	25.4	8.9	3.6	chr2	120424687	120424878	(121768651)	C	MIRb	SINE/MIR	(64)	204	2	2086943
23	22.1	2.9	1.4	chr2	127107093	127107162	(115086367)	+	(GAGC)n	Simple_repeat	1	72	(0)	2096882
362	25.0	13.2	1.8	chr2	127107731	127107844	(115085685)	C	MIR	SINE/MIR	(0)	262	134	2096883
2276	9.7	0.0	0.3	chr2	131150295	131150611	(111042918)	C	AluY	SINE/Alu	(0)	311	1	2102924
484	20.8	1.9	1.9	chr2	131150613	131150715	(111042814)	C	MLT1J2	LTR/ERVL-MaLR	(66)	382	280	2102925
1000	30.1	3.7	1.6	chr2	134094882	134095279	(108098250)	C	MLT1I	LTR/ERVL-MaLR	(2)	409	3	2106920
1147	30.9	6.0	0.3	chr2	149694816	149695192	(92498337)	C	MLT1J2	LTR/ERVL-MaLR	(6)	442	43	2128422
233	20.0	3.0	8.4	chr2	151948284	151948354	(90245175)	+	L1P2	LINE/L1	546	612	(5572)	2131606
894	30.2	5.4	4.7	chr2	157917759	157918165	(84275364)	+	MLT1J2	LTR/ERVL-MaLR	3	412	(36)	2139443
371	16.7	9.1	5.3	chr2	157918264	157918358	(84275171)	+	MamGypLTR1b	LTR/Gypsy	627	725	(57)	2139444
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
21	19.6	2.5	6.2	chr2	171160204	171160282	(71033247)	+	G-rich	Low_complexity	1	81	(0)	2157910
578	28.0	9.2	4.8	chr2	175230377	175230624	(66962905)	+	MLT1J1	LTR/ERVL-MaLR	69	328	(116)	2164517
12	19.7	4.7	2.2	chr2	183037942	183037984	(59155545)	+	(CCCGC)n	Simple_repeat	1	45	(0)	2174822
19	23.7	2.5	4.8	chr2	183038303	183038383	(59155146)	+	(CAGCCCC)n	Simple_repeat	1	83	(0)	2174823
26	0.0	0.0	0.0	chr2	183038418	183038442	(59155087)	+	(GGC)n	Simple_repeat	1	25	(0)	2174824
16	15.2	2.0	6.0	chr2	183038554	183038602	(59154927)	+	(GGCCCT)n	Simple_repeat	1	50	(0)	2174825
1122	27.0	9.2	1.6	chr2	197230634	197231013	(44962516)	C	MLT1J2	LTR/ERVL-MaLR	(4)	444	33	2193607
18	12.2	6.4	2.0	chr2	199911313	199911359	(42282170)	+	(CGCCGGC)n	Simple_repeat	1	50	(0)	2197519
13	29.3	0.0	0.0	chr2	199911453	199911494	(42282035)	+	(GCT)n	Simple_repeat	1	42	(0)	2197520
2466	14.1	8.8	1.3	chr2	207394695	207395169	(34798360)	C	LTR44	LTR/ERV1	(5)	514	1	2209933
469	32.3	6.2	2.1	chr2	207395258	207395491	(34798038)	+	MLT1J2	LTR/ERVL-MaLR	201	444	(4)	2209934
873	27.7	12.1	1.0	chr2	207395495	207395899	(34797630)	C	L2a	LINE/L2	(520)	2899	2444	2209932
231	35.1	8.7	2.9	chr2	219003334	219003506	(23190023)	C	MIRb	SINE/MIR	(31)	237	54	2227184
13	16.2	4.4	4.3	chr2	219160852	219160896	(23032633)	+	G-rich	Low_complexity	1	47	(0)	2227435
184	25.0	13.6	8.4	chr2	219160993	219161158	(23032371)	+	MIR3	SINE/MIR	10	185	(23)	2227436
1718	15.7	2.6	1.6	chr2	219685183	219685512	(22508017)	+	MER61B	LTR/ERV1	1	427	(0)	2228329
43	0.0	0.0	0.0	chr2	230987475	230987513	(11206016)	+	(CAGGGC)n	Simple_repeat	1	39	(0)	2246024
263	32.1	9.3	6.6	chr2	231961034	231961334	(10232195)	+	L2c	LINE/L2	3034	3386	(1)	2247971
1260	23.9	8.9	5.9	chr2	232973404	232973861	(9219668)	+	MLT1H	LTR/ERVL-MaLR	77	549	(0)	2249650
186	11.7	1.2	2.4	chr2	234544585	234544910	(7648619)	+	GA-rich	Low_complexity	1	330	(0)	2252149
212	29.6	15.2	1.4	chr2	234545216	234545362	(7648167)	+	Tigger19a	DNA/TcMar-Tigger	86	256	(67)	2252150
49	2.1	0.0	0.0	chr2	238125768	238125816	(4067713)	+	(TGGAG)n	Simple_repeat	1	49	(0)	2257394
384	23.9	4.1	1.9	chr2	238125960	238127216	(4066313)	+	(TCTGTG)n	Simple_repeat	1	1309	(0)	2257395
332	34.2	0.0	0.9	chr2	239006540	239006651	(3186878)	+	L2b	LINE/L2	3238	3348	(27)	2258495
1146	28.4	7.8	2.0	chr2	239006652	239007096	(3186433)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	40	2258496
478	23.1	4.0	0.4	chr2	240984530	240985845	(1207684)	+	(CACA)n	Simple_repeat	1	1368	(0)	2260561
305	28.7	3.5	0.0	chr2	241887325	241887453	(306076)	C	MLT1J1	LTR/ERVL-MaLR	(212)	236	98	2261818
20	0.0	0.0	0.0	chr2	241887493	241887514	(306015)	+	(CT)n	Simple_repeat	1	22	(0)	2261819
11	16.9	2.9	2.8	chr2	241887524	241887558	(305971)	+	(CCCCCA)n	Simple_repeat	1	36	(0)	2261820
1209	16.2	11.1	0.7	chr2	241940084	241940382	(253147)	+	LTR48B	LTR/ERV1	300	633	(11)	2261873
1630	26.3	2.3	3.4	chr20	289030	289474	(64154693)	+	MLT1J2	LTR/ERVL-MaLR	1	440	(8)	2262568
724	26.4	1.1	3.7	chr20	738618	738806	(63705361)	+	MIR	SINE/MIR	77	260	(2)	2263648
494	28.1	3.2	0.0	chr20	738823	738975	(63705192)	+	MIR	SINE/MIR	51	208	(54)	2263649
861	24.4	12.2	2.8	chr20	1047265	1047546	(63396621)	+	MLT1J2	LTR/ERVL-MaLR	69	380	(68)	2264320
759	29.9	17.7	1.0	chr20	1047582	1047993	(63396174)	C	L2a	LINE/L2	(343)	3076	2581	2264319
7704	18.8	5.7	1.6	chr20	2244607	2246848	(62197319)	C	MER68-int	LTR/ERVL	(24)	2966	601	2266571
2176	11.7	0.0	0.7	chr20	2549901	2550199	(61893968)	+	AluSx	SINE/Alu	1	297	(15)	2267161
1024	15.4	0.0	1.2	chr20	2550213	2550374	(61893793)	+	AluJb	SINE/Alu	147	306	(6)	2267162
13257	16.6	5.3	3.8	chr20	2550377	2551976	(61892191)	C	L1MC2	LINE/L1	(68)	6451	4824	2267160
14	24.4	0.0	2.2	chr20	2652173	2652218	(61791949)	+	G-rich	Low_complexity	1	46	(0)	2267366
420	31.5	17.1	2.2	chr20	3744486	3744852	(60699315)	+	L2	LINE/L2	2637	3069	(350)	2269424
651	20.6	2.1	1.4	chr20	4142077	4142219	(60301948)	+	MLT1J1	LTR/ERVL-MaLR	3	146	(298)	2270228
373	29.0	8.7	0.3	chr20	4142237	4142459	(60301708)	+	MLT1J1	LTR/ERVL-MaLR	206	444	(0)	2270228
504	16.8	2.7	0.0	chr20	11880756	11880862	(52563305)	+	MLT1H2	LTR/ERVL-MaLR	45	154	(335)	2282664
467	14.1	0.0	0.0	chr20	11880874	11880951	(52563216)	C	MLT1H	LTR/ERVL-MaLR	(246)	303	226	2282665
364	20.0	1.5	0.0	chr20	11880946	11881010	(52563157)	+	MLT1H2	LTR/ERVL-MaLR	285	350	(199)	2282664
408	22.7	9.8	5.8	chr20	11881161	11881366	(52562801)	+	Helitron1Nb_Mam	RC/Helitron	596	810	(306)	2282662
21	3.7	0.0	0.0	chr20	21511809	21511836	(42932331)	+	(ATA)n	Simple_repeat	1	28	(0)	2297200
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
181	28.4	9.3	0.0	chr20	36835379	36835466	(27608701)	C	MIR3	SINE/MIR	(4)	204	108	2318571
15	7.8	3.7	0.0	chr20	36835845	36835871	(27608296)	+	(CCG)n	Simple_repeat	1	28	(0)	2318572
497	26.9	13.6	2.2	chr20	43456858	43457085	(20987082)	+	L2	LINE/L2	2086	2343	(1076)	2331217
371	21.8	1.1	1.1	chr20	43901302	43901389	(20542778)	+	MLT1J2	LTR/ERVL-MaLR	61	148	(296)	2332223
392	29.1	2.2	5.9	chr20	43901420	43901605	(20542562)	+	MLT1J2	LTR/ERVL-MaLR	262	440	(8)	2332223
818	19.4	5.6	0.6	chr20	44736027	44736197	(19707970)	C	Zaphod3	DNA/hAT-Tip100	(2443)	180	1	2334219
751	28.7	12.2	2.1	chr20	44736275	44736562	(19707605)	C	MLT1J2	LTR/ERVL-MaLR	(127)	321	1	2334220
338	22.6	7.3	4.0	chr20	45341826	45341943	(19102224)	+	MIR3	SINE/MIR	16	141	(67)	2335436
18	12.1	6.4	2.0	chr20	45348465	45348511	(19095656)	+	(CCGGCC)n	Simple_repeat	1	50	(0)	2335450
341	23.2	4.7	0.0	chr20	45348676	45348757	(19095410)	C	MIR3	SINE/MIR	(34)	174	89	2335451
2409	6.3	1.3	2.0	chr20	46405606	46405908	(18038259)	+	AluSx1	SINE/Alu	1	301	(11)	2337607
242	31.4	9.3	4.0	chr20	46405909	46406043	(18038124)	C	L2b	LINE/L2	(608)	2811	2665	2337606
1196	26.6	7.4	3.1	chr20	47004419	47004833	(17439334)	C	MLT1J2	LTR/ERVL-MaLR	(10)	438	5	2338979
318	24.3	11.2	4.6	chr20	47503402	47503509	(16940658)	C	L1ME4b	LINE/L1	(42)	850	735	2340298
840	28.9	9.7	0.7	chr20	48173021	48173320	(16270847)	+	MLT1J2	LTR/ERVL-MaLR	1	330	(118)	2341595
492	23.7	2.0	0.0	chr20	48173388	48173484	(16270683)	+	MER81	DNA/hAT-Blackjack	16	114	(0)	2341596
226	23.3	0.0	0.0	chr20	48173485	48173526	(16270641)	+	MLT1J2	LTR/ERVL-MaLR	401	442	(6)	2341595
550	9.8	0.0	8.9	chr20	49674604	49674704	(14769463)	+	FLAM_C	SINE/Alu	42	133	(0)	2345029
191	32.3	1.6	0.0	chr20	49915961	49916022	(14528145)	C	MIRc	SINE/MIR	(119)	149	87	2345602
1222	12.4	0.0	0.0	chr20	50450926	50451103	(13993064)	C	L1MB7	LINE/L1	(12)	6172	5995	2346966
1023	23.2	3.5	6.5	chr20	50451104	50451426	(13992741)	+	MLT1G3	LTR/ERVL-MaLR	265	577	(18)	2346967
246	32.9	3.9	0.1	chr20	50451442	50451523	(13992644)	C	MIRc	SINE/MIR	(176)	92	9	2346968
19	19.2	5.5	1.7	chr20	50731396	50731450	(13712717)	+	(GC)n	Simple_repeat	1	58	(0)	2347595
922	23.1	0.9	6.9	chr20	51488335	51488566	(12955601)	C	MER20	DNA/hAT-Charlie	(0)	219	2	2349230
17	20.6	6.0	2.8	chr20	53127007	53127083	(11317084)	+	A-rich	Low_complexity	1	79	(0)	2352836
660	26.5	1.3	0.0	chr20	57745379	57745525	(6698642)	C	MER45A	DNA/hAT-Tip100	(27)	151	3	2361713
200	13.9	2.7	0.0	chr20	57745526	57745561	(6698606)	+	MIR1_Amn	SINE/MIR	115	151	(79)	2361714
992	21.5	2.7	8.3	chr20	57745564	57745618	(6698549)	C	MER33	DNA/hAT-Charlie	(28)	296	242	2361715
1792	16.7	6.4	0.7	chr20	57745619	57745912	(6698255)	+	AluJb	SINE/Alu	1	312	(0)	2361716
189	29.2	1.5	3.0	chr20	59042085	59042151	(5402016)	C	MIR3	SINE/MIR	(97)	111	46	2363833
319	17.5	0.0	0.0	chr20	63575107	63575163	(869004)	+	MLT1H2	LTR/ERVL-MaLR	429	485	(4)	2369714
1480	17.1	0.7	10.4	chr20	63575559	63575885	(868282)	C	AluJb	SINE/Alu	(17)	295	1	2369715
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
2828	18.2	1.6	1.8	chr21	7942700	7957766	(38752217)	+	(CATTC)n	Satellite	1	15309	(0)	2373121
125	23.0	0.0	0.7	chr21	7957768	7958048	(38751935)	+	(ACTCC)n	Simple_repeat	1	281	(0)	2373122
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
381	17.5	1.6	0.0	chr21	9248617	9248679	(37461304)	+	AluYj4	SINE/Alu	224	287	(24)	2374342
312	21.5	5.8	0.0	chr21	9248928	9248992	(37460991)	+	AluJb	SINE/Alu	225	293	(19)	2374343
76	18.0	0.0	0.0	chr21	9248994	9249134	(37460849)	+	(AATGG)n	Simple_repeat	1	141	(0)	2374344
4238	21.9	5.2	2.3	chr21	9341202	9342463	(37367520)	C	MER52A	LTR/ERV1	(0)	1755	1	2374438
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
1092	12.5	0.7	0.0	chr21	14046975	14047126	(32662857)	+	AluSp	SINE/Alu	138	290	(23)	2377285
46	6.5	0.0	2.9	chr21	14047139	14047207	(32662776)	+	(GAGTG)n	Simple_repeat	1	69	(0)	2377286
2348	21.5	5.2	3.3	chr21	14047210	14047543	(32662440)	+	L1MCa	LINE/L1	1095	1526	(5602)	2377284
13	10.5	6.5	0.0	chr21	25608098	25608128	(21101855)	+	(TAGTA)n	Simple_repeat	1	33	(0)	2392719
480	18.2	4.8	0.0	chr21	25608143	25608241	(21101742)	+	L2a	LINE/L2	3323	3426	(0)	2392720
216	25.8	6.1	5.1	chr21	32004241	32004338	(14705645)	C	MIR3	SINE/MIR	(108)	100	2	2402479
351	30.5	6.8	3.7	chr21	32004353	32004683	(14705300)	C	MLT1J2	LTR/ERVL-MaLR	(14)	434	66	2402480
822	31.0	7.7	6.2	chr21	32030745	32030876	(14679107)	C	LTR33	LTR/ERVL	(32)	483	348	2402534
2419	16.2	2.8	0.5	chr21	32030877	32031292	(14678691)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2402535
152	2.8	0.0	0.0	chr21	32771844	32771990	(13937993)	+	(GA)n	Simple_repeat	1	147	(0)	2403728
13	16.3	2.8	2.7	chr21	33948350	33948385	(12761598)	+	(CTCCC)n	Simple_repeat	1	37	(0)	2405868
1502	24.4	7.8	1.7	chr21	34300978	34301385	(12408598)	C	MLT1J1	LTR/ERVL-MaLR	(0)	444	10	2406404
737	23.8	10.2	10.7	chr21	36578115	36578588	(10131395)	+	MLT1H2	LTR/ERVL-MaLR	9	484	(5)	2410128
214	20.0	5.7	0.0	chr21	36578611	36578660	(10131323)	C	MIR	SINE/MIR	(1)	261	209	2410129
381	24.5	9.9	7.8	chr21	39144475	39144865	(7565118)	+	MLT1H2	LTR/ERVL-MaLR	67	621	(6)	2414072
886	24.1	10.4	5.0	chr21	39144854	39145115	(7564868)	+	MLT1J2	LTR/ERVL-MaLR	168	445	(3)	2414073
2347	10.4	0.0	0.0	chr21	42915246	42915543	(3794440)	+	AluY	SINE/Alu	1	298	(13)	2419563
483	23.1	1.7	1.7	chr21	42915550	42915668	(3794315)	C	LTR23	LTR/ERV1	(26)	411	293	2419564
334	12.5	5.1	0.0	chr21	42915674	42915729	(3794254)	C	FRAM	SINE/Alu	(12)	164	106	2419565
1892	15.5	1.0	1.0	chr21	42915733	42916035	(3793948)	C	AluSz	SINE/Alu	(9)	303	1	2419566
565	28.5	5.8	3.0	chr21	42992953	42993187	(3716796)	C	MLT1G3	LTR/ERVL-MaLR	(322)	269	28	2419701
273	31.9	1.1	0.0	chr21	44757831	44757924	(1952059)	+	L1MEf	LINE/L1	555	649	(6437)	2422123
463	25.0	6.0	3.7	chr21	44758017	44758178	(1951805)	+	MLT1I	LTR/ERVL-MaLR	244	409	(2)	2422124
371	37.8	0.6	2.2	chr21	45797155	45799130	(910853)	+	(TGGA)n	Simple_repeat	1	1988	(0)	2423208
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
1762	18.7	0.3	1.0	chr22	12192015	12192313	(38626155)	C	AluJb	SINE/Alu	(14)	298	2	2425799
3808	20.6	5.7	8.8	chr22	12192314	12192727	(38625741)	C	LTR49-int	LTR/ERV1	(1791)	4540	4283	2425797
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
27	0.0	0.0	0.0	chr22	16912360	16912385	(33906083)	+	(TTGT)n	Simple_repeat	1	26	(0)	2427982
2217	11.8	0.7	0.0	chr22	16912529	16912825	(33905643)	C	AluSx	SINE/Alu	(9)	303	5	2427983
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
113	29.2	1.3	4.4	chr22	20496137	20496610	(30321858)	+	(TCCC)n	Simple_repeat	1	480	(0)	2433428
12	24.1	0.0	0.0	chr22	21103248	21103281	(29715187)	+	(TTCTG)n	Simple_repeat	1	34	(0)	2434576
10658	7.1	6.4	0.7	chr22	23016097	23017584	(27800884)	C	LTR12C	LTR/ERV1	(0)	1579	2	2437657
198	28.9	14.2	3.1	chr22	24725970	24726162	(26092306)	+	L2a	LINE/L2	3199	3416	(10)	2440538
364	26.7	19.3	2.2	chr22	25008545	25008724	(25809744)	+	MIRb	SINE/MIR	34	251	(17)	2441234
2218	11.0	0.0	0.0	chr22	25009254	25009564	(25808904)	C	AluSx1	SINE/Alu	(0)	312	1	2441235
483	26.3	5.5	7.1	chr22	25487107	25487207	(25331261)	+	L2a	LINE/L2	3330	3426	(0)	2442310
358	27.1	0.3	0.6	chr22	25487213	25488121	(25330347)	+	(GATG)n	Simple_repeat	1	912	(0)	2442312
1031	30.0	6.3	2.7	chr22	25541373	25541786	(25276682)	+	MLT1J2	LTR/ERVL-MaLR	19	448	(0)	2442447
724	31.0	7.4	9.5	chr22	25541951	25542474	(25275994)	+	MLT1K	LTR/ERVL-MaLR	66	577	(18)	2442448
13	25.3	2.3	0.0	chr22	26590116	26590158	(24228310)	+	G-rich	Low_complexity	1	44	(0)	2444695
15	7.8	0.0	3.5	chr22	26590191	26590219	(24228249)	+	(GCCCC)n	Simple_repeat	1	29	(0)	2444696
307	31.9	11.5	5.2	chr22	26775967	26776330	(24042138)	C	MLT1I	LTR/ERVL-MaLR	(3)	408	19	2445142
1182	26.9	5.7	2.4	chr22	27688108	27688480	(23129988)	+	MLT1J2	LTR/ERVL-MaLR	63	448	(0)	2447296
19	18.5	2.0	1.9	chr22	28800537	28800587	(22017881)	+	(CGCGC)n	Simple_repeat	1	52	(0)	2449229
743	7.7	0.0	0.0	chr22	28801003	28801093	(22017375)	+	AluSx3	SINE/Alu	211	301	(10)	2449230
617	12.6	0.0	3.2	chr22	28801286	28801380	(22017088)	C	FLAM_C	SINE/Alu	(9)	134	43	2449231
2392	6.8	1.3	0.0	chr22	28801386	28801692	(22016776)	C	AluSc8	SINE/Alu	(0)	311	1	2449232
15	0.0	0.0	0.0	chr22	28883651	28883669	(21934799)	+	(GCC)n	Simple_repeat	1	19	(0)	2449492
46	14.8	0.0	1.2	chr22	28883804	28883887	(21934581)	+	(GCC)n	Simple_repeat	1	84	(0)	2449493
240	22.4	1.7	1.7	chr22	29369672	29369730	(21448738)	+	L2a	LINE/L2	3367	3425	(1)	2450406
423	32.1	2.5	2.5	chr22	30667091	30667253	(20151215)	C	MIRc	SINE/MIR	(29)	239	77	2453137
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
1157	27.3	8.6	8.2	chr22	33477127	33477877	(17340591)	+	LTR84b	LTR/ERVL	3	761	(0)	2459154
726	27.0	7.4	0.9	chr22	35556211	35556438	(15262030)	C	MIRb	SINE/MIR	(3)	265	22	2463287
547	31.8	5.8	4.7	chr22	35556619	35556933	(15261535)	C	MLT1J2	LTR/ERVL-MaLR	(125)	323	37	2463288
11	14.8	4.9	4.7	chr22	35836276	35836316	(14982152)	+	A-rich	Low_complexity	1	43	(0)	2463822
875	27.4	7.2	4.8	chr22	36038056	36038302	(14780166)	+	MLT1J2	LTR/ERVL-MaLR	74	337	(111)	2464200
2329	7.9	1.7	0.0	chr22	36038303	36038592	(14779876)	+	AluSx	SINE/Alu	1	295	(17)	2464201
211	31.2	8.1	5.3	chr22	37163682	37163813	(13654655)	C	MamSINE1	SINE/tRNA-RTE	(144)	146	11	2466646
245	29.7	6.8	4.2	chr22	37525269	37525412	(13293056)	+	MIR3	SINE/MIR	17	164	(44)	2467430
12	16.6	0.0	0.0	chr22	37525647	37525673	(13292795)	+	(CCAC)n	Simple_repeat	1	27	(0)	2467431
201	25.8	1.6	1.6	chr22	37525778	37525840	(13292628)	+	MIRb	SINE/MIR	178	240	(28)	2467432
430	30.2	2.6	2.0	chr22	37525855	37526006	(13292462)	C	MIR	SINE/MIR	(3)	259	107	2467433
39	0.0	4.7	0.0	chr22	37661332	37661374	(13157094)	+	(GTGTG)n	Simple_repeat	1	45	(0)	2467757
327	23.9	14.8	0.9	chr22	37661632	37661741	(13156727)	+	L2a	LINE/L2	3297	3424	(2)	2467758
1266	13.2	0.0	1.6	chr22	37661893	37662115	(13156353)	C	AluSx1	SINE/Alu	(0)	312	127	2467759
313	35.2	0.8	3.0	chr22	37954040	37954171	(12864297)	C	L2c	LINE/L2	(6)	3381	3253	2468495
972	27.5	11.8	2.1	chr22	38882189	38882691	(11935777)	C	L2a	LINE/L2	(7)	3419	2854	2470461
49	25.8	8.6	0.8	chr22	38923660	38923880	(11894588)	+	(TCTC)n	Simple_repeat	1	240	(0)	2470541
519	29.8	4.8	3.2	chr22	38923940	38924185	(11894283)	+	MLT1K	LTR/ERVL-MaLR	186	435	(160)	2470542
233	29.2	0.0	0.0	chr22	38924220	38924284	(11894184)	+	MLT1K	LTR/ERVL-MaLR	524	588	(7)	2470542
2170	10.8	0.3	0.0	chr22	41048338	41048625	(9769843)	+	AluSz	SINE/Alu	8	296	(16)	2475008
12	18.4	7.7	0.0	chr22	41448469	41448507	(9369961)	+	(CCTTC)n	Simple_repeat	1	42	(0)	2475931
427	23.7	16.6	6.4	chr22	41448756	41448895	(9369573)	+	MIRb	SINE/MIR	56	212	(56)	2475932
2098	11.9	2.9	0.3	chr22	41667185	41667487	(9150981)	+	AluSx1	SINE/Alu	1	311	(1)	2476466
30	7.7	0.0	0.0	chr22	41667807	41667848	(9150620)	+	(ATTT)n	Simple_repeat	1	42	(0)	2476467
201	19.7	15.5	0.0	chr22	42080263	42080333	(8738135)	+	MIRc	SINE/MIR	154	237	(31)	2477383
350	28.3	0.0	3.8	chr22	42365876	42365996	(8452472)	C	MIRc	SINE/MIR	(71)	159	50	2477893
620	26.7	4.8	3.7	chr22	42620168	42620403	(8198065)	C	MIRc	SINE/MIR	(28)	240	6	2478508
677	32.0	4.7	1.9	chr22	42620740	42621051	(8197417)	+	L4_A_Mam	LINE/RTE-X	4668	4988	(2)	2478509
2409	5.0	0.0	1.0	chr22	42935933	42936232	(7882236)	+	AluY	SINE/Alu	2	298	(13)	2479218
193	27.8	15.9	1.1	chr22	42936404	42936494	(7881974)	+	MIR3	SINE/MIR	88	194	(14)	2479219
384	22.9	2.5	9.9	chr22	44548004	44548094	(6270374)	C	L2b	LINE/L2	(266)	3109	3026	2482168
284	19.7	1.6	0.0	chr22	44548155	44548215	(6270253)	+	MLT1J2	LTR/ERVL-MaLR	77	138	(310)	2482170
14	0.0	0.0	4.5	chr22	44548240	44548261	(6270207)	+	(CTC)n	Simple_repeat	1	22	(0)	2482171
2382	8.6	0.7	0.0	chr22	44548374	44548675	(6269793)	+	AluSp	SINE/Alu	1	304	(9)	2482172
505	21.7	5.3	5.3	chr22	45069039	45069189	(5749279)	C	MLT1J1	LTR/ERVL-MaLR	(7)	437	287	2483173
46	4.1	0.0	0.0	chr22	45269255	45269305	(5549163)	+	(GGCGGG)n	Simple_repeat	1	51	(0)	2483578
258	31.8	12.8	3.4	chr22	45269343	45269638	(5548830)	+	L2c	LINE/L2	2961	3288	(87)	2483566
12	24.3	0.0	0.0	chr22	46310290	46310323	(4508145)	+	GA-rich	Low_complexity	1	34	(0)	2485353
2229	21.1	7.7	3.6	chr22	46310326	46310648	(4507820)	+	L1MB7	LINE/L1	5504	5859	(325)	2485354
13	13.2	2.6	5.1	chr22	46552217	46552254	(4266214)	+	(GCCCA)n	Simple_repeat	1	39	(0)	2485706
1271	20.7	16.9	0.9	chr22	46552334	46552766	(4265702)	+	MLT1H	LTR/ERVL-MaLR	34	549	(0)	2485707
267	28.9	15.2	2.9	chr22	46907785	46908258	(3910210)	C	L2a	LINE/L2	(225)	3201	2649	2486215
5243	17.4	7.1	7.8	chr22	48285256	48287076	(2531392)	+	L1MC2	LINE/L1	4969	6752	(10)	2488056
658	21.6	18.7	1.9	chr3	10773136	10773343	(187522216)	+	MIR	SINE/MIR	1	251	(11)	2510100
486	25.9	7.5	1.3	chr3	10773396	10773544	(187522015)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	290	2510101
1128	23.3	18.4	2.5	chr3	12706372	12706736	(185588823)	C	LTR16	LTR/ERVL	(2)	436	1	2513892
42	18.7	4.2	2.4	chr3	12706819	12706919	(185588640)	+	(TCTT)n	Simple_repeat	1	103	(0)	2513893
1752	17.8	3.5	2.6	chr3	12706920	12707228	(185588331)	C	AluJr	SINE/Alu	(0)	312	1	2513894
1636	22.8	9.7	9.5	chr3	13244993	13245485	(185050074)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	47	2514887
31	30.4	6.4	0.0	chr3	13895363	13895535	(184400024)	+	(GAGCG)n	Simple_repeat	1	184	(0)	2516116
33	5.1	0.0	0.0	chr3	13895541	13895581	(184399978)	+	(GGAGCCGAGC)n	Simple_repeat	1	41	(0)	2516117
1724	21.1	5.3	0.0	chr3	14319721	14320095	(183975464)	+	MLT1J2	LTR/ERVL-MaLR	38	433	(15)	2516677
29	16.4	1.6	1.6	chr3	15332284	15332346	(182963213)	+	(TCC)n	Simple_repeat	1	64	(0)	2518597
13	11.9	0.0	6.2	chr3	15332634	15332665	(182962894)	+	(CCCGC)n	Simple_repeat	1	32	(0)	2518598
775	31.7	9.7	1.6	chr3	15343292	15343679	(182951880)	+	MLT1J1	LTR/ERVL-MaLR	1	423	(21)	2518625
240	15.2	4.2	0.0	chr3	15343711	15343756	(182951803)	C	Tigger18a	DNA/TcMar-Tigger	(803)	49	2	2518618
488	31.9	9.1	3.6	chr3	15343762	15344011	(182951548)	+	L3	LINE/CR1	2958	3222	(877)	2518615
443	29.0	2.3	2.3	chr3	17150842	17151014	(181144545)	+	MLT1J1	LTR/ERVL-MaLR	272	444	(0)	2521484
282	8.9	0.0	0.0	chr3	17151052	17151096	(181144463)	+	MER112	DNA/hAT-Charlie	210	254	(7)	2521485
15	19.6	8.2	1.5	chr3	29280643	29280703	(169014856)	+	(CCTT)n	Simple_repeat	1	66	(0)	2538963
180	19.1	0.0	4.5	chr3	29280827	29280870	(169014689)	C	MamRTE1	LINE/RTE-BovB	(437)	3375	3334	2538964
49	27.8	0.0	0.0	chr3	29281115	29281236	(169014323)	+	(TTTT)n	Simple_repeat	1	122	(0)	2538965
2210	12.0	0.3	0.0	chr3	32899753	32900052	(165395507)	+	AluSg	SINE/Alu	1	301	(9)	2544896
330	24.1	7.8	0.0	chr3	32900153	32900235	(165395324)	+	MER8	DNA/TcMar-Tigger	63	152	(87)	2544897
238	20.2	11.3	6.0	chr3	32900280	32900379	(165395180)	+	MER8	DNA/TcMar-Tigger	134	239	(0)	2544898
902	15.6	10.7	1.5	chr3	32900584	32900801	(165394758)	+	L1MA4	LINE/L1	6073	6304	(1)	2544899
1178	23.9	6.1	3.4	chr3	38355588	38355907	(159939652)	+	MLT1J1	LTR/ERVL-MaLR	69	397	(47)	2552920
2388	9.4	0.0	0.3	chr3	38355969	38356277	(159939282)	+	AluY	SINE/Alu	1	308	(3)	2552921
263	29.0	16.9	0.0	chr3	44729869	44730030	(153565529)	+	MIRc	SINE/MIR	24	218	(50)	2562571
449	34.7	5.2	8.0	chr3	47541733	47542193	(150753366)	+	L3	LINE/CR1	3650	4096	(3)	2567401
47	2.2	0.0	0.0	chr3	49673796	49673842	(148621717)	+	(CTCACG)n	Simple_repeat	1	47	(0)	2571786
790	31.4	1.3	1.7	chr3	56430938	56431167	(141864392)	+	MIRb	SINE/MIR	26	254	(14)	2582111
235	26.9	0.0	0.0	chr3	56431123	56431174	(141864385)	+	L2b	LINE/L2	3313	3364	(11)	2582112
12	11.9	10.8	0.0	chr3	56431176	56431212	(141864347)	+	(TAGCAA)n	Simple_repeat	1	41	(0)	2582113
394	22.3	3.8	4.8	chr3	56431424	56431617	(141863942)	+	MLT1I	LTR/ERVL-MaLR	239	444	(4)	2582114
256	24.4	21.1	3.7	chr3	57164069	57164204	(141131355)	C	MIRb	SINE/MIR	(82)	186	21	2583443
16	21.6	1.7	5.0	chr3	69013317	69013375	(129282184)	+	G-rich	Low_complexity	1	60	(0)	2603323
1062	32.9	3.8	2.9	chr3	70229430	70229848	(128065711)	+	MLT1J2	LTR/ERVL-MaLR	2	424	(24)	2605516
1139	25.9	6.2	0.6	chr3	71363696	71364014	(126931545)	+	MLT1J2	LTR/ERVL-MaLR	1	338	(110)	2607117
464	6.0	0.0	0.0	chr3	71364075	71364124	(126931435)	C	AluSc8	SINE/Alu	(132)	179	130	2607118
775	23.6	9.0	3.6	chr3	72253826	72254030	(126041529)	+	MLT1H	LTR/ERVL-MaLR	1	223	(326)	2608796
34	0.0	0.0	0.0	chr3	72254031	72254059	(126041500)	+	(CT)n	Simple_repeat	1	29	(0)	2608797
775	23.6	9.0	3.6	chr3	72254060	72254073	(126041486)	+	MLT1H	LTR/ERVL-MaLR	224	233	(316)	2608796
870	25.7	1.7	10.7	chr3	72254107	72254359	(126041200)	+	MLT1H	LTR/ERVL-MaLR	216	445	(104)	2608796
250	34.6	8.7	2.2	chr3	78995402	78995584	(119299975)	+	L2	LINE/L2	2654	2849	(570)	2618905
1738	10.6	0.0	0.0	chr3	100068624	100068850	(98226709)	C	AluSx1	SINE/Alu	(8)	304	78	2641131
18	23.9	0.0	2.2	chr3	107522822	107522867	(90772692)	+	(TG)n	Simple_repeat	1	46	(0)	2651000
31	0.0	0.0	0.0	chr3	107523219	107523247	(90772312)	+	(GCG)n	Simple_repeat	1	29	(0)	2651001
15	24.9	1.9	1.8	chr3	112086265	112086318	(86209241)	+	(CCGCT)n	Simple_repeat	1	55	(0)	2657367
767	26.8	12.7	8.4	chr3	125095496	125095878	(73199681)	+	MLT1J2	LTR/ERVL-MaLR	47	448	(0)	2676426
1334	29.6	8.3	2.1	chr3	125095917	125096514	(73199045)	+	L2a	LINE/L2	2789	3426	(0)	2676425
850	17.2	5.4	1.7	chr3	129211530	129211706	(69083853)	+	L1MB4	LINE/L1	5997	6180	(0)	2683296
262	32.0	6.1	4.1	chr3	129212117	129212276	(69083283)	+	MIR3	SINE/MIR	26	187	(21)	2683298
1177	33.0	11.4	4.1	chr3	138390829	138391436	(59904123)	C	L1MEi	LINE/L1	(2677)	3537	2856	2697457
14	14.1	0.0	3.0	chr3	155870486	155870520	(42425039)	+	G-rich	Low_complexity	1	33	(0)	2723194
14	28.2	0.0	4.6	chr3	155870798	155870862	(42424697)	+	(CCGTC)n	Simple_repeat	1	65	(0)	2723195
12	17.5	3.1	0.0	chr3	155870839	155870870	(42424689)	+	(CCGGCC)n	Simple_repeat	1	33	(0)	2723196
263	33.2	8.1	7.7	chr3	156535434	156535903	(41759656)	+	L2	LINE/L2	2282	2753	(666)	2724171
376	30.1	0.0	1.0	chr3	158801546	158801649	(39493910)	+	L2c	LINE/L2	3266	3368	(19)	2727326
44	0.0	0.0	0.0	chr3	160756753	160756790	(37538769)	+	(GT)n	Simple_repeat	1	38	(0)	2730313
19	31.2	1.7	6.6	chr3	169025482	169025600	(29269959)	+	(TA)n	Simple_repeat	1	121	(0)	2740844
266	21.5	3.1	5.0	chr3	169025607	169025746	(29269813)	C	MLT1H	LTR/ERVL-MaLR	(0)	579	444	2740845
280	27.4	5.3	11.4	chr3	169025714	169025853	(29269706)	C	MLT1H	LTR/ERVL-MaLR	(229)	320	190	2740845
254	20.2	11.9	0.0	chr3	169025915	169026003	(29269556)	+	L1ME4a	LINE/L1	6012	6112	(12)	2740843
478	34.3	11.1	2.6	chr3	169031093	169031553	(29264006)	+	L2c	LINE/L2	1823	2327	(1092)	2740849
21	0.0	0.0	0.0	chr3	169031582	169031604	(29263955)	+	(A)n	Simple_repeat	1	23	(0)	2740853
428	30.8	7.9	7.9	chr3	169031624	169032015	(29263544)	C	MLT1J1	LTR/ERVL-MaLR	(52)	392	1	2740854
15	12.6	0.0	0.0	chr3	172129992	172130018	(26165541)	+	(GAGG)n	Simple_repeat	1	27	(0)	2745651
13	16.1	2.5	4.9	chr3	182364969	182365008	(15930551)	+	G-rich	Low_complexity	1	41	(0)	2760930
364	23.4	9.9	1.5	chr3	188197888	188198017	(10097542)	+	MIRc	SINE/MIR	3	144	(124)	2771466
4095	15.4	3.6	1.3	chr3	194928677	194929381	(3366178)	+	MER50	LTR/ERV1	1	722	(12)	2782087
17	16.2	3.9	3.7	chr4	1856653	1856704	(188357851)	+	(CTGCGCT)n	Simple_repeat	1	54	(0)	2790697
236	23.1	0.3	3.1	chr4	2793977	2794056	(187420499)	+	MIR1_Amn	SINE/MIR	93	171	(97)	2792251
316	21.2	16.3	1.7	chr4	3201824	3201938	(187012617)	C	MER5C	DNA/hAT-Charlie	(91)	222	88	2792924
1649	20.6	1.0	1.0	chr4	3543853	3544162	(186670393)	+	AluJo	SINE/Alu	1	310	(2)	2793271
330	29.9	1.1	0.0	chr4	3544562	3544648	(186669907)	C	MIRb	SINE/MIR	(94)	174	87	2793272
740	30.2	9.1	2.3	chr4	4777717	4778062	(185436493)	+	L3	LINE/CR1	3726	4097	(2)	2795438
1279	26.1	9.7	0.8	chr4	4778090	4778483	(185436072)	C	MLT1J2	LTR/ERVL-MaLR	(3)	445	13	2795439
385	25.2	3.7	5.5	chr4	4778522	4778630	(185435925)	C	L2c	LINE/L2	(0)	3387	3281	2795440
382	11.9	3.3	0.0	chr4	6582688	6582746	(183631809)	C	AluJr	SINE/Alu	(187)	125	65	2798660
12	7.9	11.4	4.1	chr4	6582801	6582844	(183631711)	+	(CCCCTCA)n	Simple_repeat	1	49	(0)	2798661
621	28.1	3.6	8.7	chr4	6582942	6583296	(183631259)	C	MLT1J2	LTR/ERVL-MaLR	(50)	398	63	2798662
552	25.7	0.6	6.4	chr4	6583297	6583483	(183631072)	C	MLT1J	LTR/ERVL-MaLR	(334)	178	3	2798663
433	30.0	7.0	10.5	chr4	7492905	7493332	(182721223)	C	MLT1J1	LTR/ERVL-MaLR	(10)	434	23	2800222
44	27.4	1.6	0.0	chr4	13627443	13627570	(176586985)	+	(CGG)n	Simple_repeat	1	130	(0)	2809599
644	26.6	7.9	5.9	chr4	16159965	16160396	(174054159)	C	MLT1J2	LTR/ERVL-MaLR	(51)	461	9	2813895
13	23.9	0.0	2.4	chr4	18021876	18021916	(172192639)	+	(CTCCC)n	Simple_repeat	1	41	(0)	2817244
202	32.4	3.9	0.0	chr4	26320446	26320519	(163894036)	+	L2b	LINE/L2	3298	3374	(1)	2830849
10453	7.1	4.8	5.2	chr4	31996207	31997789	(158216766)	+	LTR12C	LTR/ERV1	3	1579	(0)	2838855
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
524	28.2	18.2	3.3	chr4	56181013	56181408	(134033147)	C	L2a	LINE/L2	(20)	3406	2939	2872183
596	25.1	4.7	1.7	chr4	72031637	72031829	(118182726)	C	MIR	SINE/MIR	(1)	261	63	2892989
361	0.0	0.0	0.0	chr4	78551312	78551352	(111663203)	+	MADE1	DNA/TcMar-Mariner	40	80	(0)	2902298
240	22.0	0.0	0.0	chr4	78551371	78551420	(111663135)	+	MIR	SINE/MIR	203	252	(10)	2902297
214	36.3	5.6	1.0	chr4	78551428	78551530	(111663025)	+	L2c	LINE/L2	3261	3368	(19)	2902299
12	15.9	5.7	0.0	chr4	78551707	78551741	(111662814)	+	(GGAGGCA)n	Simple_repeat	1	37	(0)	2902300
1782	24.3	9.3	5.5	chr4	83039025	83039551	(107175004)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	2908729
1086	26.5	9.0	6.0	chr4	83039552	83039635	(107174920)	C	L1MEg	LINE/L1	(4932)	1244	1166	2908728
13	12.2	7.9	2.4	chr4	84583041	84583078	(105631477)	+	(TCC)n	Simple_repeat	1	41	(0)	2911314
23	31.3	5.2	0.7	chr4	88379171	88379305	(101835250)	+	G-rich	Low_complexity	1	142	(0)	2917064
258	25.0	0.0	5.9	chr4	95556634	95556735	(94657820)	+	MLT1H	LTR/ERVL-MaLR	438	533	(16)	2926567
240	34.6	6.9	7.5	chr4	95556798	95557075	(94657480)	C	L2c	LINE/L2	(60)	3327	3052	2926568
25	18.8	2.9	1.4	chr4	107824859	107824926	(82389629)	+	G-rich	Low_complexity	1	70	(0)	2942568
2092	12.1	0.0	0.0	chr4	109571304	109571611	(80642944)	C	AluSx	SINE/Alu	(0)	312	2	2945204
500	24.8	16.6	4.3	chr4	109571680	109571991	(80642564)	C	MLT1J1	LTR/ERVL-MaLR	(127)	317	1	2945205
27	3.5	0.0	0.0	chr4	110199042	110199071	(80015484)	+	(CCACCC)n	Simple_repeat	1	30	(0)	2946149
27	19.9	3.5	3.4	chr4	110636976	110637061	(79577494)	+	(TCTC)n	Simple_repeat	1	89	(0)	2946880
833	25.0	2.1	5.7	chr4	111993049	111993345	(78221210)	+	UCON84	Unknown	148	433	(294)	2948519
759	30.8	11.4	2.0	chr4	113044137	113044477	(77170078)	C	MLT1J2	LTR/ERVL-MaLR	(4)	444	68	2950312
18	0.0	0.0	0.0	chr4	122153160	122153179	(68061376)	+	(T)n	Simple_repeat	1	20	(0)	2962146
198	28.3	5.2	7.1	chr4	123549540	123549638	(66664917)	+	X9_LINE	LINE/L1	698	794	(142)	2964166
690	25.1	5.8	6.5	chr4	123549789	123550065	(66664490)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	236	2964167
1331	10.8	0.0	0.0	chr4	123550066	123550223	(66664332)	+	AluSp	SINE/Alu	137	294	(19)	2964168
886	15.2	18.7	2.2	chr4	128387527	128387708	(61826847)	C	MER20	DNA/hAT-Charlie	(0)	219	1	2970676
15	8.8	0.0	0.0	chr4	133152406	133152429	(57062126)	+	(TGC)n	Simple_repeat	1	24	(0)	2976653
311	25.3	4.6	0.0	chr4	139955852	139955934	(50258621)	+	MLT1J1	LTR/ERVL-MaLR	247	333	(111)	2985498
597	26.6	9.4	4.3	chr4	139956055	139956286	(50258269)	+	MIRc	SINE/MIR	24	268	(0)	2985505
30	18.1	0.0	0.0	chr4	142405125	142405180	(47809375)	+	GA-rich	Low_complexity	1	56	(0)	2988908
592	31.5	5.5	5.5	chr4	145287323	145287722	(44926833)	C	MLT1J2	LTR/ERVL-MaLR	(22)	426	27	2992690
11	16.7	5.9	0.0	chr4	148442943	148442976	(41771579)	+	(CTCCAG)n	Simple_repeat	1	36	(0)	2997125
1677	23.6	6.5	3.7	chr4	150782301	150782789	(39431766)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	2	3000245
415	24.1	15.1	4.1	chr4	153093320	153093466	(37121089)	C	MLT1I	LTR/ERVL-MaLR	(43)	368	203	3004015
331	28.2	14.8	3.2	chr4	182542860	182543013	(7671542)	C	MIRb	SINE/MIR	(51)	217	43	3043545
46	8.7	7.2	0.0	chr4	182543127	182543237	(7671318)	+	(ATGGATGC)n	Simple_repeat	1	119	(0)	3043548
12	0.0	12.5	0.0	chr4	182543239	182543262	(7671293)	+	(AGGGA)n	Simple_repeat	1	27	(0)	3043549
969	17.3	9.3	0.0	chr4	182859905	182860089	(7354466)	+	MER3	DNA/hAT-Charlie	6	209	(0)	3043998
396	25.0	12.6	1.2	chr4	182859947	182860108	(7354447)	C	MER3	DNA/hAT-Charlie	(0)	209	27	3043999
982	24.8	0.4	2.5	chr4	182860096	182860339	(7354216)	+	MLT1J1	LTR/ERVL-MaLR	203	441	(3)	3044000
17	12.3	0.0	5.1	chr4	183905199	183905237	(6309318)	+	(CCCAGG)n	Simple_repeat	1	39	(0)	3045775
191	35.0	8.5	7.3	chr4	184893654	184893804	(5320751)	C	L2b	LINE/L2	(6)	3369	3217	3047349
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
255	25.4	2.7	0.0	chr5	10484729	10484799	(171053460)	C	MLT1O	LTR/ERVL-MaLR	(7)	588	516	3066968
361	23.8	3.5	1.2	chr5	62295921	62296005	(119242254)	C	MLT1J2	LTR/ERVL-MaLR	(120)	328	242	3133511
13	17.0	3.0	0.0	chr5	66144345	66144377	(115393882)	+	G-rich	Low_complexity	1	34	(0)	3139018
17	18.3	0.0	0.0	chr5	66144385	66144421	(115393838)	+	(CGGCTT)n	Simple_repeat	1	37	(0)	3139019
13	30.8	0.0	3.2	chr5	66144565	66144627	(115393632)	+	G-rich	Low_complexity	1	63	(0)	3139020
199	33.3	6.1	3.1	chr5	74399101	74399227	(107139032)	C	L3	LINE/CR1	(121)	3978	3848	3151917
1274	24.7	8.3	1.6	chr5	74399231	74399609	(107138650)	+	MLT1J2	LTR/ERVL-MaLR	25	431	(17)	3151918
665	28.2	4.1	12.4	chr5	77892937	77893405	(103644854)	+	MLT1J1	LTR/ERVL-MaLR	10	416	(28)	3157340
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
219	37.0	2.5	2.5	chr5	119267706	119267827	(62270432)	+	MIR1_Amn	SINE/MIR	66	187	(43)	3212075
211	27.0	0.0	6.3	chr5	119267865	119267943	(62270316)	+	L2c	LINE/L2	3314	3387	(0)	3212074
248	35.7	10.1	8.0	chr5	122493927	122494188	(59044071)	+	L2b	LINE/L2	3108	3375	(0)	3215969
1094	30.6	2.3	1.7	chr5	128713084	128713429	(52824830)	+	L2a	LINE/L2	405	752	(2667)	3224479
504	31.2	6.2	1.9	chr5	128713435	128713695	(52824564)	C	MLT1J1	LTR/ERVL-MaLR	(22)	422	150	3224480
14	12.3	2.6	5.0	chr5	132963182	132963232	(48575027)	+	(CCCGG)n	Simple_repeat	1	49	(0)	3230229
17	30.3	0.0	1.6	chr5	132963394	132963455	(48574804)	+	(GGC)n	Simple_repeat	1	62	(0)	3230230
630	21.3	7.5	5.4	chr5	135514642	135514825	(46023434)	C	MLT1J2	LTR/ERVL-MaLR	(5)	507	257	3234408
918	20.5	9.8	2.3	chr5	135514826	135515090	(46023169)	C	MER5C	DNA/hAT-Charlie	(0)	313	27	3234409
21	24.2	0.0	8.7	chr5	140639334	140639436	(40898823)	+	(GCCCC)n	Simple_repeat	1	103	(0)	3242980
475	30.3	8.6	5.0	chr5	140639952	140640288	(40897971)	+	L2b	LINE/L2	2522	2871	(548)	3242981
483	28.5	4.5	5.3	chr5	145975732	145975965	(35562294)	+	MIR	SINE/MIR	21	247	(15)	3251632
24	27.4	3.6	2.6	chr5	150486521	150486630	(31051629)	+	(GCGG)n	Simple_repeat	1	114	(0)	3260074
450	24.0	0.0	2.0	chr5	150487115	150487216	(31051043)	+	MIRc	SINE/MIR	64	163	(105)	3260075
239	27.7	6.5	8.2	chr5	150497959	150498068	(31040191)	+	Charlie4z	DNA/hAT-Charlie	39	146	(21)	3260103
649	26.5	7.8	0.8	chr5	150498150	150498389	(31039870)	+	MIR	SINE/MIR	2	259	(3)	3260104
224	34.0	8.8	1.3	chr5	150586638	150586795	(30951464)	+	L2a	LINE/L2	3256	3426	(0)	3260296
37	9.5	2.4	2.4	chr5	150587188	150587269	(30950990)	+	(ATGG)n	Simple_repeat	1	84	(0)	3260298
389	32.4	7.0	0.0	chr5	151454907	151455079	(30083180)	C	L3	LINE/CR1	(321)	3778	3593	3261900
297	32.0	0.0	12.3	chr5	151455223	151455401	(30082858)	C	L3b	LINE/CR1	(581)	3518	3383	3261902
363	27.0	23.2	1.8	chr5	163460873	163461098	(18077161)	C	L2a	LINE/L2	(14)	3412	3124	3282584
987	26.8	7.0	12.0	chr5	172605862	172606311	(8931948)	C	MLT1J2	LTR/ERVL-MaLR	(21)	427	2	3297812
46	22.0	4.1	0.0	chr5	172718507	172718627	(8819632)	+	(GATG)n	Simple_repeat	1	126	(0)	3298041
321	8.3	0.0	2.6	chr5	172718635	172719133	(8819126)	+	(TGGA)n	Simple_repeat	1	499	(0)	3298042
341	22.9	7.6	3.9	chr5	176837948	176838074	(4700185)	C	L2a	LINE/L2	(0)	3426	3295	3306091
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
12	23.3	0.0	0.0	chr5	178895967	178896001	(2642258)	+	G-rich	Low_complexity	1	35	(0)	3310021
224	31.7	7.3	3.8	chr5	179381657	179381787	(2156472)	+	MIR	SINE/MIR	16	151	(111)	3310740
728	1.2	0.0	0.0	chr5	181174044	181174125	(364134)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3313785
19	8.8	0.0	7.1	chr5	181187385	181187426	(350833)	+	(TTTTA)n	Simple_repeat	1	42	(0)	3313821
734	0.0	0.0	0.0	chr5	181187701	181187782	(350477)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	3313822
18	12.1	2.6	2.6	chr6	1390829	1390866	(169415113)	+	(CGG)n	Simple_repeat	1	39	(0)	3316042
697	18.5	0.7	0.7	chr6	3209274	3209409	(167596570)	+	MER5A1	DNA/hAT-Charlie	27	162	(4)	3318577
241	34.9	7.8	3.6	chr6	12045032	12045227	(158760752)	+	MamSINE1	SINE/tRNA-RTE	2	206	(84)	3332120
730	8.7	0.0	0.0	chr6	13615955	13616046	(157189933)	+	AluJb	SINE/Alu	202	293	(19)	3334589
200	11.3	23.2	0.0	chr6	13616084	13616136	(157189843)	+	MIRc	SINE/MIR	180	248	(20)	3334590
17	13.4	0.0	2.9	chr6	13924389	13924423	(156881556)	+	GA-rich	Low_complexity	1	35	(0)	3335168
18	19.2	2.0	2.0	chr6	13924572	13924620	(156881359)	+	(GGT)n	Simple_repeat	1	50	(0)	3335169
21	20.3	3.1	7.0	chr6	15984406	15984502	(154821477)	+	(ATATTGG)n	Simple_repeat	1	100	(0)	3338801
2032	28.1	7.2	5.5	chr6	15984572	15985895	(154820084)	+	L1MC5a	LINE/L1	7	874	(1903)	3338802
223	27.7	4.4	0.0	chr6	18596795	18596859	(152209120)	+	L3	LINE/CR1	4031	4098	(1)	3343332
377	26.7	9.8	9.9	chr6	18938649	18938900	(151867079)	C	MLT1J1	LTR/ERVL-MaLR	(70)	374	99	3343784
27	0.0	6.1	0.0	chr6	28720586	28720618	(142085361)	+	(GTTTT)n	Simple_repeat	1	35	(0)	3359089
2325	8.6	0.0	0.4	chr6	28720619	28720896	(142085083)	C	AluSc8	SINE/Alu	(33)	278	2	3359090
535	15.3	0.0	0.0	chr6	28862120	28862204	(141943775)	+	MER50	LTR/ERV1	145	229	(505)	3359351
738	27.6	10.8	7.5	chr6	31014143	31014596	(139791383)	C	HAL1	LINE/L1	(387)	2120	1650	3362657
742	25.8	7.1	0.9	chr6	31014604	31014826	(139791153)	C	MLT1J1	LTR/ERVL-MaLR	(7)	437	200	3362658
1409	26.4	4.3	3.9	chr6	31014885	31015342	(139790637)	C	MER74B	LTR/ERVL	(93)	529	70	3362659
272	33.0	13.7	3.1	chr6	33390848	33391075	(137414904)	+	MIRb	SINE/MIR	4	259	(9)	3366376
735	26.4	5.2	10.1	chr6	36671017	36671362	(134134617)	C	MLT1I	LTR/ERVL-MaLR	(14)	397	70	3373059
650	22.8	10.2	1.9	chr6	36750425	36750639	(134055340)	+	MLT1J2	LTR/ERVL-MaLR	202	436	(12)	3373210
13	28.9	0.0	0.0	chr6	37433291	37433332	(133372647)	+	(GGC)n	Simple_repeat	1	42	(0)	3374686
13	27.1	0.0	3.9	chr6	37433376	37433427	(133372552)	+	(GCGG)n	Simple_repeat	1	52	(0)	3374687
1444	22.7	10.3	2.5	chr6	37650789	37651226	(133154753)	+	MLT1J	LTR/ERVL-MaLR	6	481	(31)	3375064
635	17.0	0.0	0.0	chr6	38338098	38338203	(132467776)	C	MER44B	DNA/TcMar-Tigger	(0)	550	445	3376220
1436	16.7	0.4	0.0	chr6	38338205	38338437	(132467542)	C	MER44B	DNA/TcMar-Tigger	(317)	233	1	3376220
18	26.3	4.3	5.0	chr6	41209198	41209312	(129596667)	+	(CTCTCC)n	Simple_repeat	1	120	(0)	3380793
2276	8.6	3.9	0.7	chr6	41763015	41763315	(129042664)	+	AluSx	SINE/Alu	2	312	(0)	3381778
29	0.0	0.0	0.0	chr6	42929620	42929646	(127876333)	+	(TGC)n	Simple_repeat	1	27	(0)	3384362
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
17	12.0	2.6	2.6	chr6	82364685	82364722	(88441257)	+	(GCAGGA)n	Simple_repeat	1	39	(0)	3435072
18	23.3	0.0	0.0	chr6	82365048	82365092	(88440887)	+	(CTC)n	Simple_repeat	1	45	(0)	3435073
663	20.9	1.5	0.0	chr6	87092396	87092524	(83713455)	+	FRAM	SINE/Alu	28	158	(18)	3441046
39	19.5	8.9	0.0	chr6	87092525	87092537	(83713442)	+	GA-rich	Low_complexity	1	132	(0)	3441047
33	23.0	0.9	5.5	chr6	87092538	87092645	(83713334)	+	A-rich	Low_complexity	1	109	(0)	3441048
1814	14.7	0.0	9.1	chr6	87092739	87093078	(83712901)	C	AluJb	SINE/Alu	(3)	309	1	3441049
699	31.3	4.7	6.4	chr6	87473519	87473969	(83332010)	+	MamTip3	DNA/hAT-Tip100	58	500	(0)	3441608
31	0.0	0.0	0.0	chr6	90065271	90065299	(80740680)	+	(T)n	Simple_repeat	1	29	(0)	3445850
544	22.4	11.2	3.3	chr6	90065316	90065416	(80740563)	+	MLT1H2	LTR/ERVL-MaLR	219	332	(157)	3445849
906	19.2	10.4	1.5	chr6	90065417	90065617	(80740362)	C	MER58A	DNA/hAT-Charlie	(2)	222	2	3445851
20	11.6	0.0	0.0	chr6	90218492	90218526	(80587453)	+	(T)n	Simple_repeat	1	35	(0)	3446049
43	0.0	0.0	0.0	chr6	90218921	90218957	(80587022)	+	(GT)n	Simple_repeat	1	37	(0)	3446050
17	20.5	0.0	4.7	chr6	90218962	90219004	(80586975)	+	GA-rich	Low_complexity	1	43	(0)	3446051
12	8.0	7.4	0.0	chr6	98845843	98845869	(71960110)	+	(TCCTT)n	Simple_repeat	1	29	(0)	3456782
13	20.8	0.0	0.0	chr6	100881277	100881309	(69924670)	+	(CAGA)n	Simple_repeat	1	33	(0)	3459593
15	9.3	7.8	5.5	chr6	100881405	100881455	(69924524)	+	(CCTCCG)n	Simple_repeat	1	55	(0)	3459594
525	18.7	7.5	3.1	chr6	109082391	109082517	(61723462)	C	MIRb	SINE/MIR	(130)	138	6	3471620
3835	14.4	5.2	4.6	chr6	110530575	110531295	(60274684)	C	LTR8A	LTR/ERV1	(0)	727	2	3473805
68	0.0	0.0	0.0	chr6	111568433	111568490	(59237489)	+	(GT)n	Simple_repeat	1	58	(0)	3475844
488	11.9	1.5	0.0	chr6	111568636	111568702	(59237277)	+	AluSz	SINE/Alu	1	68	(244)	3475845
13	15.7	9.3	0.0	chr6	111568709	111568751	(59237228)	+	(ATCCATG)n	Simple_repeat	1	47	(0)	3475846
943	26.9	7.6	5.3	chr6	111870040	111870475	(58935504)	+	MLT1J2	LTR/ERVL-MaLR	2	448	(0)	3476289
20	33.8	0.9	3.5	chr6	116279178	116279291	(54526688)	+	(TCC)n	Simple_repeat	1	115	(0)	3482344
15	12.8	2.8	2.7	chr6	116279371	116279406	(54526573)	+	(CCTCAG)n	Simple_repeat	1	37	(0)	3482345
11	18.8	4.3	4.2	chr6	117482790	117482835	(53323144)	+	(CGGCGG)n	Simple_repeat	1	48	(0)	3483950
23	25.6	3.5	1.1	chr6	117482937	117483021	(53322958)	+	G-rich	Low_complexity	1	88	(0)	3483951
19	9.9	8.3	4.6	chr6	119078776	119078835	(51727144)	+	(CCGCAG)n	Simple_repeat	1	65	(0)	3486086
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
13	13.2	6.7	4.2	chr6	125956943	125956987	(44848992)	+	(GAGGCGC)n	Simple_repeat	1	48	(0)	3495078
16	11.3	4.8	4.5	chr6	128883311	128883352	(41922627)	+	(GCA)n	Simple_repeat	1	44	(0)	3498755
227	34.7	0.0	1.3	chr6	133882148	133882223	(36923756)	+	MLT1J2	LTR/ERVL-MaLR	257	331	(117)	3505822
449	33.3	0.7	2.0	chr6	144266496	144266642	(26539337)	C	MIR3	SINE/MIR	(6)	202	58	3521135
13	18.2	2.6	2.5	chr6	144285043	144285081	(26520898)	+	G-rich	Low_complexity	1	40	(0)	3521175
43	14.5	0.0	0.0	chr6	148343092	148343167	(22462812)	+	(CCGGAG)n	Simple_repeat	1	76	(0)	3526766
344	33.3	12.5	7.3	chr6	149686444	149687089	(21118890)	+	L2	LINE/L2	337	1055	(2364)	3528937
2084	27.8	6.8	3.6	chr6	150076450	150077402	(20728577)	+	L1MEd	LINE/L1	463	1389	(823)	3529623
24	21.4	3.0	1.4	chr6	151391468	151391582	(19414397)	+	(GCG)n	Simple_repeat	1	116	(0)	3531914
28	19.6	2.0	6.9	chr6	151391701	151391800	(19414179)	+	(GCC)n	Simple_repeat	1	102	(0)	3531915
357	24.1	14.6	7.2	chr6	154284409	154284685	(16521294)	+	MLT1J1	LTR/ERVL-MaLR	38	338	(106)	3536082
2302	10.6	0.0	0.0	chr6	154284721	154285012	(16520967)	+	AluSx4	SINE/Alu	2	293	(17)	3536083
281	27.5	2.4	0.0	chr6	158531515	158531594	(12274385)	+	HAL1	LINE/L1	581	662	(1845)	3542678
455	30.7	10.5	2.8	chr6	158531611	158532110	(12273869)	C	MLT1H	LTR/ERVL-MaLR	(0)	489	61	3542679
2482	13.1	2.4	0.8	chr6	160520332	160520822	(10285157)	C	LTR12E	LTR/ERV1	(823)	499	1	3545512
28	17.5	2.3	5.7	chr6	160991642	160991727	(9814252)	+	(CGC)n	Simple_repeat	1	88	(0)	3546054
829	28.3	12.0	2.3	chr6	162838172	162838562	(7967417)	C	MLT1J2	LTR/ERVL-MaLR	(14)	434	1	3548725
352	15.8	5.0	0.0	chr6	167546584	167546659	(3259320)	+	MLT1I	LTR/ERVL-MaLR	251	330	(81)	3554544
249	30.0	10.6	0.0	chr7	442479	442588	(158903385)	+	L2a	LINE/L2	3301	3423	(3)	3558349
655	7.7	5.9	1.3	chr7	442598	443926	(158902047)	+	(GGAT)n	Simple_repeat	1	1407	(0)	3558350
14	24.0	0.0	0.0	chr7	455720	455758	(158890215)	+	(GCCC)n	Simple_repeat	1	39	(0)	3558370
378	27.5	9.6	2.4	chr7	474624	474890	(158871083)	C	MLT1J1	LTR/ERVL-MaLR	(0)	444	153	3558388
15	13.3	0.0	5.4	chr7	474943	474979	(158870994)	+	(AGGC)n	Simple_repeat	1	37	(0)	3558389
12	16.0	0.0	3.3	chr7	1312318	1312347	(158033626)	+	G-rich	Low_complexity	1	30	(0)	3559670
336	27.7	9.1	0.8	chr7	1312633	1312763	(158033210)	C	MLT1J2	LTR/ERVL-MaLR	(22)	426	284	3559671
545	28.8	0.6	2.4	chr7	4114647	4114810	(155231163)	C	MLT1J2	LTR/ERVL-MaLR	(13)	435	275	3564272
466	32.2	3.9	3.6	chr7	5294365	5294693	(154051280)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	82	3566715
188	21.9	0.0	0.0	chr7	5294794	5294834	(154051139)	C	MER5A	DNA/hAT-Charlie	(120)	69	29	3566716
38	24.9	4.2	7.0	chr7	6272188	6272447	(153073526)	+	(CCCCGGC)n	Simple_repeat	1	271	(0)	3568920
13	7.6	8.5	5.9	chr7	6348517	6348563	(152997410)	+	G-rich	Low_complexity	1	51	(0)	3569142
12	18.4	5.4	0.0	chr7	6348780	6348816	(152997157)	+	(GCCGC)n	Simple_repeat	1	39	(0)	3569143
2159	7.2	1.8	0.4	chr7	6448232	6448507	(152897466)	C	AluSz	SINE/Alu	(32)	280	1	3569392
844	16.4	0.6	10.9	chr7	6448511	6448693	(152897280)	C	AluJr	SINE/Alu	(15)	297	134	3569393
1810	11.2	0.3	12.4	chr7	6448700	6449057	(152896916)	C	AluSp	SINE/Alu	(0)	313	2	3569394
6301	11.4	4.4	2.0	chr7	6516203	6517050	(152828923)	+	LTR13_	LTR/ERVK	1	880	(74)	3569561
895	16.4	6.5	3.2	chr7	22578419	22578640	(136767333)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	298	3590871
18	10.8	3.3	0.0	chr7	22578657	22578686	(136767287)	+	(CT)n	Simple_repeat	1	31	(0)	3590872
375	23.4	21.4	0.0	chr7	25894112	25894265	(133451708)	C	MIRb	SINE/MIR	(59)	209	14	3596084
1100	22.9	12.1	0.6	chr7	25894358	25894700	(133451273)	+	MLT1J2	LTR/ERVL-MaLR	46	433	(15)	3596085
234	30.2	1.1	7.5	chr7	25894798	25894890	(133451083)	+	MIR3	SINE/MIR	122	208	(0)	3596086
20	27.1	0.0	0.0	chr7	28854656	28854705	(130491268)	+	(AC)n	Simple_repeat	1	50	(0)	3600671
384	17.6	8.2	2.9	chr7	30763910	30764055	(128581918)	C	MLT1J2	LTR/ERVL-MaLR	(35)	477	258	3603634
930	16.6	3.3	2.2	chr7	30764064	30764242	(128581731)	C	MER5A	DNA/hAT-Charlie	(8)	181	1	3603635
246	29.6	6.0	0.8	chr7	32670175	32670300	(126675673)	C	L4_A_Mam	LINE/RTE-X	(415)	4575	4443	3606614
12	16.8	0.0	10.2	chr7	32943209	32943257	(126402716)	+	G-rich	Low_complexity	1	49	(0)	3607044
20	27.2	6.9	0.0	chr7	33109240	33109340	(126236633)	+	(GCTGCC)n	Simple_repeat	1	108	(0)	3607377
26	0.0	0.0	0.0	chr7	33109418	33109442	(126236531)	+	(CGG)n	Simple_repeat	1	25	(0)	3607378
344	13.1	12.8	0.0	chr7	33109717	33109777	(126236196)	C	Ricksha_0	DNA/MULE-MuDR	(251)	1482	1413	3607379
1263	11.2	0.0	0.0	chr7	33109782	33109951	(126236022)	+	AluSx1	SINE/Alu	131	300	(12)	3607380
253	31.6	7.7	7.7	chr7	38318856	38319140	(121026833)	+	L2c	LINE/L2	3054	3338	(49)	3614938
41	14.3	3.9	0.0	chr7	39085708	39085797	(120260176)	+	GA-rich	Low_complexity	1	93	(0)	3616052
3197	7.4	12.5	0.2	chr7	43810212	43810659	(115535314)	+	LTR10F	LTR/ERV1	1	511	(0)	3623225
12522	9.1	2.5	1.4	chr7	43810660	43812640	(115533333)	+	HERVIP10F-int	LTR/ERV1	1	1914	(5823)	3623225
31	18.7	4.1	3.9	chr7	44847977	44848074	(114497899)	+	(CGC)n	Simple_repeat	1	102	(0)	3625016
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
759	6.5	2.1	0.0	chr7	65269914	65270005	(94075968)	C	AluSx3	SINE/Alu	(21)	290	197	3647584
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
84	11.5	0.0	0.0	chr7	65489745	65489886	(93856087)	+	(CCATT)n	Simple_repeat	1	142	(0)	3647902
383	14.3	3.1	0.0	chr7	65489887	65489949	(93856024)	C	AluYj4	SINE/Alu	(22)	289	225	3647903
85	11.3	0.7	0.6	chr7	65489965	65490119	(93855854)	+	(TTCCA)n	Simple_repeat	1	156	(0)	3647904
48	19.0	0.9	2.6	chr7	65490120	65490168	(93855805)	+	(CTCCA)n	Simple_repeat	1	48	(0)	3647905
2893	1.9	0.0	0.0	chr7	65490169	65490477	(93855496)	C	AluYa5	SINE/Alu	(2)	309	1	3647906
1647	10.9	2.6	4.4	chr7	66681394	66681667	(92664306)	C	AluJr	SINE/Alu	(7)	305	37	3650581
824	14.4	0.8	0.8	chr7	67301858	67301989	(92043984)	+	AluJo	SINE/Alu	1	132	(180)	3651927
18	5.6	4.9	4.7	chr7	67301990	67302023	(92043950)	+	A-rich	Low_complexity	7	41	(0)	3651928
1714	17.4	3.6	1.7	chr7	67344111	67344409	(92001564)	C	AluJo	SINE/Alu	(7)	305	1	3651997
600	26.4	6.7	6.0	chr7	67344528	67344809	(92001164)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	128	3651998
3871	8.9	3.2	2.8	chr7	67344815	67345377	(92000596)	+	MER61E	LTR/ERV1	1	565	(4)	3651999
936	25.8	13.0	1.9	chr7	69198716	69199166	(90146807)	C	LTR50	LTR/ERVL	(0)	795	198	3656117
551	17.3	14.7	5.8	chr7	69199716	69199887	(90146086)	C	LTR50	LTR/ERVL	(556)	239	50	3656117
1062	18.9	19.0	3.2	chr7	69807654	69807940	(89538033)	C	MLT1F1	LTR/ERVL-MaLR	(152)	396	59	3657412
1913	10.5	7.9	2.5	chr7	69807941	69808226	(89537747)	C	AluSx	SINE/Alu	(9)	303	1	3657413
2401	5.5	0.7	0.7	chr7	71150499	71150787	(88195186)	C	AluY	SINE/Alu	(0)	311	23	3659592
727	20.3	5.4	9.8	chr7	71150788	71150821	(88195152)	+	MLT1J2	LTR/ERVL-MaLR	198	225	(219)	3659591
757	15.4	17.0	0.7	chr7	71150858	71151000	(88194973)	+	AluJr	SINE/Alu	135	305	(7)	3659593
437	23.4	11.0	2.0	chr7	71151002	71151149	(88194824)	+	MLT1J2	LTR/ERVL-MaLR	282	444	(0)	3659591
12	20.2	0.0	6.7	chr7	73738869	73738913	(85607060)	+	(CCGCC)n	Simple_repeat	1	45	(0)	3665345
225	24.7	8.8	0.0	chr7	76191583	76191655	(83154318)	C	MLT1J2	LTR/ERVL-MaLR	(7)	437	358	3671539
581	14.2	0.0	1.7	chr7	76191693	76191802	(83154171)	C	FLAM_C	SINE/Alu	(166)	136	35	3671540
899	24.9	6.7	2.8	chr7	76191800	76192084	(83153889)	C	MLT1J2	LTR/ERVL-MaLR	(87)	361	65	3671539
13	7.1	0.0	10.8	chr7	76235025	76235061	(83110912)	+	G-rich	Low_complexity	1	37	(0)	3671661
13	28.4	0.9	8.5	chr7	76235311	76235415	(83110558)	+	G-rich	Low_complexity	1	106	(0)	3671662
372	7.7	0.0	0.0	chr7	76235540	76235591	(83110382)	+	MADE1	DNA/TcMar-Mariner	1	52	(28)	3671663
888	28.8	6.1	5.4	chr7	78242063	78242469	(81103504)	+	MLT1J2	LTR/ERVL-MaLR	23	432	(16)	3675202
22	13.8	0.0	0.0	chr7	82443816	82443855	(76902118)	+	(GCGGAG)n	Simple_repeat	1	40	(0)	3680896
15	29.2	2.9	1.4	chr7	95772666	95772733	(63573240)	+	(CCG)n	Simple_repeat	1	70	(0)	3698470
12	21.7	0.0	0.0	chr7	95772813	95772844	(63573129)	+	(CCACC)n	Simple_repeat	1	32	(0)	3698471
2078	18.4	2.7	4.5	chr7	97958235	97966025	(61379948)	+	SATR2	Satellite	1	7653	(4)	3701556
19	20.1	1.1	9.9	chr7	98870017	98870106	(60475867)	+	(CGC)n	Simple_repeat	1	91	(0)	3703608
18	0.0	0.0	0.0	chr7	98870573	98870594	(60475379)	+	(TGC)n	Simple_repeat	1	22	(0)	3703609
2259	8.7	3.9	0.3	chr7	98870598	98870897	(60475076)	C	AluSx1	SINE/Alu	(1)	311	1	3703610
557	25.0	13.4	10.1	chr7	99126907	99127173	(60218800)	C	MLT1I	LTR/ERVL-MaLR	(62)	349	73	3704011
492	28.9	13.4	1.7	chr7	99982623	99982918	(59363055)	C	MLT1J2	LTR/ERVL-MaLR	(66)	382	47	3705599
252	25.3	1.3	5.1	chr7	100367243	100367321	(58978652)	C	MER96B	DNA/hAT-Tip100	(341)	76	1	3706440
718	30.9	6.9	3.9	chr7	100367337	100367673	(58978300)	+	MLT1J2	LTR/ERVL-MaLR	80	427	(21)	3706441
360	29.7	14.0	1.8	chr7	101287969	101288267	(58057706)	+	MLT1J2	LTR/ERVL-MaLR	47	382	(66)	3708430
12	14.6	0.0	5.9	chr7	105531920	105531953	(53814020)	+	A-rich	Low_complexity	1	34	(0)	3716068
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
14	22.7	4.5	4.3	chr7	116672312	116672378	(42673595)	+	(GGCG)n	Simple_repeat	1	70	(0)	3731400
16	22.5	4.7	5.6	chr7	116672439	116672524	(42673449)	+	(GAGCG)n	Simple_repeat	1	90	(0)	3731401
412	31.2	13.5	2.4	chr7	128738496	128738869	(30607104)	C	L2c	LINE/L2	(48)	3339	2918	3747900
27	0.0	0.0	0.0	chr7	128739101	128739126	(30606847)	+	(GGGGCT)n	Simple_repeat	1	26	(0)	3747901
12	13.7	0.0	0.0	chr7	128783387	128783410	(30562563)	+	(CTG)n	Simple_repeat	1	24	(0)	3747962
653	0.0	0.0	0.0	chr7	128783450	128783521	(30562452)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	3747963
15	16.3	4.7	2.2	chr7	134779647	134779689	(24566284)	+	(CTGC)n	Simple_repeat	1	45	(0)	3758022
15	14.4	0.0	0.0	chr7	134891699	134891722	(24454251)	+	(T)n	Simple_repeat	1	24	(0)	3758187
21	0.0	0.0	0.0	chr7	134891746	134891768	(24454205)	+	(A)n	Simple_repeat	1	23	(0)	3758188
15	4.3	4.2	0.0	chr7	138461132	138461155	(20884818)	+	(CCG)n	Simple_repeat	1	25	(0)	3763677
12	18.7	4.3	4.2	chr7	139036021	139036066	(20309907)	+	(CGCGG)n	Simple_repeat	1	48	(0)	3764777
14	17.3	5.1	0.0	chr7	139036105	139036143	(20309830)	+	(GCCTGG)n	Simple_repeat	1	41	(0)	3764778
1246	17.6	5.2	7.3	chr7	139036415	139036455	(20309518)	+	MER33	DNA/hAT-Charlie	17	51	(273)	3764779
1756	17.9	1.9	0.3	chr7	139036456	139036762	(20309211)	C	AluJo	SINE/Alu	(0)	312	1	3764780
2135	23.2	6.3	0.4	chr7	139650543	139651049	(19694924)	+	MLT1F	LTR/ERVL-MaLR	1	539	(9)	3765983
904	24.6	9.0	2.0	chr7	140061149	140061447	(19284526)	+	MLT1J1	LTR/ERVL-MaLR	69	390	(54)	3766650
15	5.6	0.0	0.0	chr7	140061449	140061467	(19284506)	+	(AC)n	Simple_repeat	1	19	(0)	3766651
13	23.7	2.5	0.0	chr7	140061472	140061511	(19284462)	+	GA-rich	Low_complexity	1	41	(0)	3766652
1175	11.0	0.0	0.6	chr7	140533919	140534081	(18811892)	C	AluSx	SINE/Alu	(17)	295	134	3767701
4192	12.0	6.9	1.2	chr7	140672105	140672755	(18673218)	C	LTR8	LTR/ERV1	(0)	691	1	3767990
42	0.0	0.0	0.0	chr7	148339975	148340010	(11005963)	+	(GT)n	Simple_repeat	1	36	(0)	3778604
2359	5.5	3.7	0.0	chr7	148884977	148885265	(10460708)	C	AluSp	SINE/Alu	(13)	300	1	3779541
61	0.0	0.0	0.0	chr7	151875563	151875614	(7470359)	+	(GT)n	Simple_repeat	1	52	(0)	3784164
22	23.3	4.3	0.0	chr7	151876026	151876095	(7469878)	+	(CTCCC)n	Simple_repeat	1	73	(0)	3784165
1021	27.4	6.5	2.9	chr7	151990598	151990980	(7354993)	+	MLT1J1	LTR/ERVL-MaLR	39	436	(8)	3784381
15	21.5	1.5	7.2	chr7	152435690	152435757	(6910216)	+	(CTGCGG)n	Simple_repeat	1	69	(0)	3785118
22	9.5	0.0	0.0	chr7	152435838	152435871	(6910102)	+	(CCG)n	Simple_repeat	1	34	(0)	3785119
47	10.4	4.3	5.8	chr7	152436007	152436122	(6909851)	+	(GCGG)n	Simple_repeat	1	121	(0)	3785120
16	0.0	0.0	0.0	chr7	155445564	155445580	(3900393)	+	(A)n	Simple_repeat	1	17	(0)	3789649
4077	21.5	4.8	7.2	chr7	155445977	155446590	(3899383)	+	Charlie1	DNA/hAT-Charlie	1536	2169	(612)	3789650
278	28.7	2.1	2.1	chr7	155475704	155475849	(3870124)	+	MLT1J1	LTR/ERVL-MaLR	71	217	(231)	3789682
1165	25.9	9.3	1.5	chr7	155536450	155536856	(3809117)	+	MLT1J2	LTR/ERVL-MaLR	6	447	(1)	3789756
1684	25.0	9.8	6.0	chr7	155624470	155625247	(3720726)	C	L1ME3E	LINE/L1	(357)	5885	5052	3789900
741	27.2	8.3	6.1	chr7	155625254	155625547	(3720426)	C	MLT1J2	LTR/ERVL-MaLR	(4)	444	144	3789904
433	21.7	0.0	1.1	chr7	155625572	155625664	(3720309)	+	MER5A1	DNA/hAT-Charlie	43	134	(32)	3789905
1365	16.3	0.4	0.4	chr7	157142627	157142854	(2203119)	+	L1PA16	LINE/L1	5929	6156	(10)	3791942
2301	7.4	0.3	4.5	chr7	157142855	157143166	(2202807)	C	AluSp	SINE/Alu	(14)	299	1	3791943
321	24.4	16.5	5.3	chr7	157502750	157503017	(1842956)	+	MLT1J2	LTR/ERVL-MaLR	156	415	(33)	3792542
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
12	17.6	4.5	4.3	chr7	158705144	158705187	(640786)	+	GA-rich	Low_complexity	1	46	(0)	3793569
13	10.5	6.5	0.0	chr8	17497022	17497052	(127641584)	+	(CCGCC)n	Simple_repeat	1	33	(0)	3818285
281	27.7	4.0	0.0	chr8	19142272	19142390	(125996246)	+	L1M	LINE/L1	5259	5382	(741)	3820728
233	25.4	0.0	0.0	chr8	19142474	19142528	(125996108)	+	MLT1J2	LTR/ERVL-MaLR	102	156	(288)	3820729
363	22.9	8.4	8.8	chr8	19142635	19142826	(125995810)	+	MLT1J2	LTR/ERVL-MaLR	258	448	(0)	3820729
2013	25.3	6.5	0.7	chr8	19142827	19143578	(125995058)	+	L1ME3Cz	LINE/L1	134	932	(65)	3820730
1472	15.8	2.4	3.1	chr8	25127843	25128135	(120010501)	+	L1PA13	LINE/L1	14	304	(6481)	3830550
4061	18.4	5.7	1.3	chr8	25128459	25129310	(120009326)	+	L1PA13	LINE/L1	332	1223	(5562)	3830550
254	29.1	7.2	0.8	chr8	26642776	26642893	(118495743)	C	MLT1J1	LTR/ERVL-MaLR	(37)	407	282	3833096
207	33.0	9.5	2.4	chr8	26643045	26643249	(118495387)	C	L2	LINE/L2	(972)	2447	2227	3833095
13	15.9	5.7	0.0	chr8	30385041	30385075	(114753561)	+	(GCCCA)n	Simple_repeat	1	37	(0)	3839686
328	36.5	4.2	2.1	chr8	37398339	37398478	(107740158)	+	L2b	LINE/L2	3230	3372	(3)	3850254
15	23.2	0.0	2.1	chr8	38232081	38232127	(106906509)	+	G-rich	Low_complexity	1	47	(0)	3851938
531	28.3	0.0	0.0	chr8	41792883	41792995	(103345641)	C	L2b	LINE/L2	(0)	3375	3263	3857596
525	30.2	7.6	0.3	chr8	41882037	41882248	(103256388)	+	MIRc	SINE/MIR	17	247	(21)	3857774
42	2.2	2.2	0.0	chr8	42896741	42896786	(102241850)	+	(CGG)n	Simple_repeat	1	47	(0)	3859714
16	18.2	3.2	6.2	chr8	42896842	42896904	(102241732)	+	G-rich	Low_complexity	1	65	(0)	3859715
440	19.2	6.4	1.0	chr8	56069241	56069344	(89069292)	C	AluYg6	SINE/Alu	(10)	301	192	3873486
1858	10.5	0.0	0.0	chr8	56069361	56069598	(89069038)	C	AluSx	SINE/Alu	(74)	238	1	3873487
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
15	12.2	0.0	0.0	chr8	58659589	58659615	(86479021)	+	(GCT)n	Simple_repeat	1	27	(0)	3876891
12	13.7	10.0	0.0	chr8	63168653	63168692	(81969944)	+	(CGAGAGAG)n	Simple_repeat	1	44	(0)	3882838
12	5.6	0.0	0.0	chr8	63168758	63168776	(81969860)	+	(CGG)n	Simple_repeat	1	19	(0)	3882839
14	5.0	0.0	0.0	chr8	63168838	63168858	(81969778)	+	(GGC)n	Simple_repeat	1	21	(0)	3882840
27	20.0	1.3	4.0	chr8	85177479	85177553	(59961083)	+	(GCC)n	Simple_repeat	1	76	(0)	3914155
12	14.6	0.0	5.9	chr8	89902510	89902543	(55236093)	+	(CCGCC)n	Simple_repeat	1	34	(0)	3920466
22	6.5	0.0	0.0	chr8	97452740	97452772	(47685864)	+	(CATGG)n	Simple_repeat	1	33	(0)	3931742
24	20.7	1.3	5.1	chr8	97452919	97452995	(47685641)	+	A-rich	Low_complexity	1	78	(0)	3931743
22	15.0	1.4	9.3	chr8	97452921	97452994	(47685642)	+	GA-rich	Low_complexity	1	75	(0)	3931744
488	27.1	3.1	0.6	chr8	97453055	97453210	(47685426)	+	MIR3	SINE/MIR	44	203	(5)	3931745
14	19.1	0.0	6.4	chr8	97644083	97644129	(47494507)	+	(GCCCC)n	Simple_repeat	1	47	(0)	3932076
648	25.6	7.5	2.8	chr8	100667499	100667815	(44470821)	C	Charlie20a	DNA/hAT-Charlie	(257)	550	218	3937217
993	27.8	9.7	4.5	chr8	102662739	102663224	(42475412)	+	MLT1G1	LTR/ERVL-MaLR	1	514	(65)	3940841
276	20.0	0.0	0.0	chr8	102663288	102663337	(42475299)	+	MLT1H2	LTR/ERVL-MaLR	440	489	(0)	3940842
2537	7.7	0.0	0.7	chr8	102663557	102663866	(42474770)	+	AluSx1	SINE/Alu	1	308	(4)	3940843
18	3.7	3.6	0.0	chr8	108787618	108787645	(36350991)	+	(GGCGG)n	Simple_repeat	1	29	(0)	3949880
241	31.2	11.8	1.6	chr8	116839640	116839744	(28298892)	+	MIR3	SINE/MIR	13	127	(141)	3960706
534	33.2	2.9	7.5	chr8	116839745	116840102	(28298534)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	71	3960707
2064	13.8	0.7	0.3	chr8	123004484	123004788	(22133848)	+	AluJb	SINE/Alu	2	307	(5)	3970972
535	21.7	2.5	14.7	chr8	123004789	123004879	(22133757)	+	MLT1J2	LTR/ERVL-MaLR	283	357	(91)	3970971
40	0.0	4.5	0.0	chr8	123004880	123004923	(22133713)	+	(TGAT)n	Simple_repeat	1	46	(0)	3970973
2007	14.2	0.0	0.0	chr8	123004924	123005205	(22133431)	C	AluSz	SINE/Alu	(29)	283	2	3970974
753	30.4	8.1	1.7	chr8	123447905	123448266	(21690370)	+	MLT1J1	LTR/ERVL-MaLR	62	448	(0)	3971904
2166	10.2	0.0	2.3	chr8	123448331	123448635	(21690001)	+	AluSz	SINE/Alu	1	298	(14)	3971905
18	22.1	0.0	0.0	chr8	124474896	124474937	(20663699)	+	(GCC)n	Simple_repeat	1	42	(0)	3973782
18	23.0	0.0	5.9	chr8	124475020	124475087	(20663549)	+	(CCCGCC)n	Simple_repeat	1	68	(0)	3973783
15	19.9	2.5	0.0	chr8	124475055	124475094	(20663542)	+	(GCCCT)n	Simple_repeat	1	41	(0)	3973784
1657	22.2	7.7	2.1	chr8	139675814	139676231	(5462405)	+	MLT1J2	LTR/ERVL-MaLR	1	443	(5)	4000725
356	26.2	3.9	5.8	chr8	139676300	139676467	(5462169)	+	L2c	LINE/L2	3194	3382	(5)	4000726
338	22.3	13.4	0.0	chr8	140601940	140602042	(4536594)	+	MLT1J1	LTR/ERVL-MaLR	259	377	(67)	4002243
324	28.6	3.6	4.5	chr8	141547591	141547823	(3590813)	C	MLT1I	LTR/ERVL-MaLR	(64)	380	119	4003790
1078	14.0	0.2	0.5	chr8	143669231	143669438	(1469198)	C	LTR10B1	LTR/ERV1	(55)	492	240	4006487
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
226	12.1	0.0	0.0	chr8	143669745	143669777	(1468859)	+	Alu	SINE/Alu	2	34	(99)	4006490
303	13.6	4.3	2.9	chr8	143669777	143669844	(1468792)	C	MSTA	LTR/ERVL-MaLR	(175)	253	185	4006491
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
878	25.4	12.5	4.1	chr9	2127357	2127750	(136266967)	C	MLT1J1	LTR/ERVL-MaLR	(12)	432	1	4011686
269	26.7	6.5	0.0	chr9	5833509	5833594	(132561123)	C	MIRc	SINE/MIR	(49)	219	128	4017078
292	27.1	5.6	2.0	chr9	5849990	5850132	(132544585)	C	MIR3	SINE/MIR	(87)	181	31	4017117
283	20.0	0.0	3.2	chr9	5850137	5850198	(132544519)	+	MER5A1	DNA/hAT-Charlie	14	73	(93)	4017118
1824	9.8	0.4	0.0	chr9	5850202	5850435	(132544282)	+	AluSq2	SINE/Alu	79	313	(0)	4017119
1021	25.6	2.3	7.7	chr9	12595664	12596056	(125798661)	C	MLT1H	LTR/ERVL-MaLR	(42)	507	52	4026442
14	20.8	1.2	10.8	chr9	21974812	21974893	(116419824)	+	(CCG)n	Simple_repeat	1	83	(0)	4039935
13	18.8	2.6	2.6	chr9	21989989	21990026	(116404691)	+	GA-rich	Low_complexity	1	39	(0)	4039963
16	12.6	6.8	6.3	chr9	33817006	33817064	(104577653)	+	GA-rich	Low_complexity	1	63	(0)	4056030
28	2.9	2.9	0.0	chr9	33817125	33817159	(104577558)	+	(CCCT)n	Simple_repeat	1	36	(0)	4056031
11	24.4	4.0	1.9	chr9	38069374	38069423	(100325294)	+	(GGCCCGG)n	Simple_repeat	1	52	(0)	4063872
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
1359	26.5	5.7	1.0	chr9	77447528	77447931	(60946786)	C	MLT1J2	LTR/ERVL-MaLR	(2)	446	23	4094291
13	21.6	8.2	2.5	chr9	81689772	81689844	(56704873)	+	(TCTCC)n	Simple_repeat	1	79	(0)	4100306
836	31.1	7.9	1.8	chr9	87630340	87630729	(50763988)	C	MLT1J2	LTR/ERVL-MaLR	(32)	416	1	4109792
221	27.8	0.0	0.0	chr9	87630741	87630794	(50763923)	C	MIR3	SINE/MIR	(2)	206	153	4109793
3925	7.6	4.8	0.2	chr9	96347665	96348180	(42046537)	+	MER41A	LTR/ERV1	14	554	(0)	4122681
851	25.9	4.6	4.3	chr9	96348233	96348534	(42046183)	+	MLT1I	LTR/ERVL-MaLR	98	400	(11)	4122682
32	26.8	1.8	1.8	chr9	97983153	97983272	(40411445)	+	(CGCCG)n	Simple_repeat	1	120	(0)	4125544
16	19.6	2.0	3.9	chr9	97983395	97983444	(40411273)	+	(CCGC)n	Simple_repeat	1	51	(0)	4125545
16	0.0	0.0	0.0	chr9	100082388	100082405	(38312312)	+	(AT)n	Simple_repeat	1	18	(0)	4129521
332	34.8	6.5	5.1	chr9	100082479	100082543	(38312174)	+	L1M2	LINE/L1	4884	4949	(1194)	4129522
925	23.1	2.1	17.0	chr9	100082544	100082825	(38311892)	C	MER8	DNA/TcMar-Tigger	(0)	239	1	4129523
16	9.3	0.0	0.0	chr9	101791903	101791940	(36602777)	+	(CA)n	Simple_repeat	1	38	(0)	4132217
14	24.7	0.0	8.2	chr9	107489948	107490020	(30904697)	+	G-rich	Low_complexity	1	73	(0)	4140835
12	28.1	6.2	0.0	chr9	109779952	109780015	(28614702)	+	(GCGC)n	Simple_repeat	1	68	(0)	4145117
955	34.0	4.7	2.7	chr9	113062933	113063595	(25331122)	+	L1MA9	LINE/L1	5622	6298	(14)	4150944
285	36.8	2.5	0.8	chr9	113620438	113620555	(24774162)	C	MIR3	SINE/MIR	(0)	208	89	4152031
292	35.3	0.0	1.9	chr9	113669569	113669672	(24725045)	+	MIR3	SINE/MIR	28	129	(79)	4152145
1240	26.2	9.2	2.9	chr9	113669688	113670103	(24724614)	+	MLT1J2	LTR/ERVL-MaLR	1	445	(3)	4152146
528	30.7	1.8	1.0	chr9	114738774	114738969	(23655748)	+	MIR3	SINE/MIR	15	205	(3)	4154347
260	31.1	2.9	3.6	chr9	124868723	124868859	(13525858)	+	L2b	LINE/L2	3071	3206	(169)	4173428
16	15.3	0.0	5.0	chr9	124869136	124869175	(13525542)	+	(GGC)n	Simple_repeat	1	40	(0)	4173429
19	13.2	4.5	7.1	chr9	124869211	124869277	(13525440)	+	(GAGCG)n	Simple_repeat	1	70	(0)	4173430
14	30.1	3.3	3.2	chr9	127612184	127612273	(10782444)	+	(CCCCGC)n	Simple_repeat	1	93	(0)	4178642
2443	8.7	0.0	0.3	chr9	127637092	127637403	(10757314)	C	AluSp	SINE/Alu	(2)	311	1	4178705
12	12.0	3.7	0.0	chr9	128552423	128552449	(9842268)	+	G-rich	Low_complexity	1	28	(0)	4180817
13	8.5	0.0	14.0	chr9	128552779	128552828	(9841889)	+	(GGCGG)n	Simple_repeat	1	50	(0)	4180818
29	17.8	0.0	0.0	chr9	128787274	128787330	(9607387)	+	(GGC)n	Simple_repeat	1	57	(0)	4181331
14	11.6	0.0	3.3	chr9	129174722	129174751	(9219966)	+	(CTTT)n	Simple_repeat	1	30	(0)	4182240
24	11.0	4.5	5.8	chr9	129174945	129175010	(9219707)	+	G-rich	Low_complexity	1	69	(0)	4182241
16	22.6	0.0	0.0	chr9	129175064	129175096	(9219621)	+	A-rich	Low_complexity	1	33	(0)	4182242
593	29.9	7.0	6.7	chr9	129234200	129234497	(9160220)	+	MLT1I	LTR/ERVL-MaLR	113	411	(0)	4182387
1376	24.4	10.4	4.1	chr9	129317619	129318033	(9076684)	+	MLT1J2	LTR/ERVL-MaLR	1	444	(4)	4182557
242	31.2	3.6	1.5	chr9	129639677	129639789	(8754928)	+	MIRc	SINE/MIR	81	192	(76)	4183295
16	15.4	2.8	0.0	chr9	130043221	130043256	(8351461)	+	GA-rich	Low_complexity	1	37	(0)	4184177
15	23.6	5.5	0.0	chr9	130043273	130043342	(8351375)	+	(CGCCCC)n	Simple_repeat	1	73	(0)	4184178
329	20.7	7.7	0.0	chr9	134103195	134103298	(4291419)	+	MIRb	SINE/MIR	107	228	(40)	4191564
890	4.4	6.3	0.8	chr9	134103374	134104735	(4289982)	+	(ATCC)n	Simple_repeat	1	1448	(0)	4191565
2275	10.1	1.6	0.0	chr9	137286714	137287010	(1107707)	C	AluSx	SINE/Alu	(10)	302	1	4195450
2042	9.6	7.6	0.0	chr9	137287312	137287591	(1107126)	C	AluSq	SINE/Alu	(10)	303	1	4195451
670	24.7	3.4	0.5	chr9	137346609	137346807	(1047910)	C	MLT1E2-int	LTR/ERVL-MaLR	(1166)	205	1	4195523
1903	13.4	0.0	0.0	chr9	137668889	137669186	(725531)	C	AluSx	SINE/Alu	(14)	298	1	4195997
207	25.5	9.7	6.3	chr9	137669558	137669716	(725001)	+	L2	LINE/L2	1660	1824	(1595)	4195998
27	6.0	0.0	0.0	chrX	2920905	2920939	(153119956)	+	(CTAC)n	Simple_repeat	1	35	(0)	4363847
563	23.4	1.8	6.2	chrX	2920970	2921147	(153119748)	+	MER20	DNA/hAT-Charlie	48	217	(2)	4363848
617	37.5	9.5	2.1	chrX	15349051	15349526	(140691369)	+	L3	LINE/CR1	2666	3180	(919)	4384217
2372	10.7	0.0	0.0	chrX	16802810	16803117	(139237778)	C	AluSg7	SINE/Alu	(1)	308	1	4386751
2458	5.9	0.0	0.3	chrX	16803355	16803642	(139237253)	C	AluYc	SINE/Alu	(12)	287	1	4386752
284	26.4	12.2	0.0	chrX	22209517	22209645	(133831250)	C	L1ME3G	LINE/L1	(646)	351	205	4395683
702	18.0	3.5	8.7	chrX	23743552	23743611	(132297284)	C	MER5B	DNA/hAT-Charlie	(5)	173	123	4397948
2318	9.3	0.7	0.0	chrX	23743612	23743911	(132296984)	+	AluSx1	SINE/Alu	1	302	(10)	4397949
702	18.0	3.5	8.7	chrX	23743912	23744033	(132296862)	C	MER5B	DNA/hAT-Charlie	(56)	122	1	4397948
1085	16.3	7.3	3.2	chrX	39885866	39885946	(116154949)	+	L1MB3	LINE/L1	6084	6181	(2)	4421378
414	29.9	7.1	4.8	chrX	39886007	39886171	(116154724)	+	MLT1J	LTR/ERVL-MaLR	233	401	(111)	4421377
269	29.7	15.3	0.0	chrX	40471677	40471787	(115569108)	+	L2c	LINE/L2	3031	3161	(226)	4422524
816	28.1	6.8	1.6	chrX	40472294	40472321	(115568574)	C	L1ME3G	LINE/L1	(96)	828	799	4422525
919	24.4	11.6	1.3	chrX	40472322	40472699	(115568196)	+	ERV3-16A3_LTR	LTR/ERVL	1	422	(0)	4422526
298	30.0	2.9	2.9	chrX	41066997	41067099	(114973796)	+	LTR88c	LTR/Gypsy?	676	778	(84)	4423612
420	22.5	10.1	2.7	chrX	41067295	41067440	(114973455)	C	L2a	LINE/L2	(356)	3070	2913	4423613
469	23.2	15.9	0.0	chrX	46528983	46529167	(109511728)	C	MIR	SINE/MIR	(20)	242	23	4432297
242	28.1	1.5	11.7	chrX	46529305	46529388	(109511507)	C	L2c	LINE/L2	(0)	3387	3305	4432298
2388	8.8	0.0	0.0	chrX	46529389	46529685	(109511210)	+	AluSg	SINE/Alu	1	297	(13)	4432299
182	27.4	12.9	5.6	chrX	46544837	46544979	(109495916)	C	L2a	LINE/L2	(1)	3425	3271	4432333
295	27.6	5.7	0.1	chrX	46545006	46545111	(109495784)	+	MIR	SINE/MIR	63	173	(89)	4432334
1452	21.7	8.2	7.0	chrX	47384387	47384832	(108656063)	+	MER4B-int	LTR/ERV1	4545	4996	(1762)	4434017
2461	20.4	8.2	1.8	chrX	47384536	47385108	(108655787)	+	MER21-int	LTR/ERVL	1801	2413	(1778)	4434025
365	27.2	14.4	3.9	chrX	73943786	73943965	(82096930)	+	MIRc	SINE/MIR	25	226	(42)	4464969
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
488	27.6	3.8	0.0	chrX	109891168	109891294	(46149601)	+	MER91A	DNA/hAT-Tip100	28	159	(37)	4507524
17	24.1	3.3	1.6	chrX	118727424	118727483	(37313412)	+	(GCC)n	Simple_repeat	1	62	(0)	4519783
1117	10.0	1.3	0.0	chrX	119887931	119888080	(36152815)	C	AluJb	SINE/Alu	(34)	278	127	4522066
2750	14.9	11.9	9.4	chrX	123846525	123846912	(32193983)	+	LTR8B	LTR/ERV1	210	654	(166)	4527500
767	12.2	19.6	0.0	chrX	123846913	123847043	(32193852)	+	AluSx3	SINE/Alu	136	298	(13)	4527501
15	29.8	0.0	0.0	chrX	129523567	129523608	(26517287)	+	(CC)n	Simple_repeat	1	42	(0)	4534805
12	15.3	5.3	2.5	chrX	154370549	154370586	(1670309)	+	(CTGCCCA)n	Simple_repeat	1	40	(0)	4571754
13	13.2	0.0	0.0	chrX	154370687	154370711	(1670184)	+	(CCAG)n	Simple_repeat	1	25	(0)	4571755
324	20.9	5.5	6.1	chrX	155026291	155026438	(1014457)	+	Zaphod3	DNA/hAT-Tip100	1789	1935	(688)	4572784
184	29.0	4.6	0.0	chrX	155026506	155026567	(1014328)	+	L2a	LINE/L2	3355	3419	(7)	4572775
333	21.9	3.0	0.0	chrY	10663511	10663574	(46563841)	C	AluYj4	SINE/Alu	(22)	289	224	4587921
331	24.7	1.4	0.0	chrY	10677231	10677303	(46550112)	C	AluYj4	SINE/Alu	(14)	297	224	4587970
161	20.0	0.9	0.3	chrY	10677304	10677635	(46549780)	+	(ATTCC)n	Simple_repeat	1	335	(0)	4587971
125	14.9	0.5	0.5	chrY	10923567	10923784	(46303631)	+	(TCCAC)n	Simple_repeat	1	219	(0)	4588447
1259	23.0	0.4	0.6	chrY	10960982	10961612	(46265803)	+	(CATTC)n	Satellite	2	631	(0)	4588527
314	25.0	2.9	0.0	chrY	10994005	10994072	(46233343)	C	AluYa8	SINE/Alu	(18)	292	223	4588621
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
320	23.8	1.6	0.5	chrY	11031071	11031156	(46196259)	C	AluY	SINE/Alu	(9)	293	208	4588745
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157