2198	11.0	0.7	1.3	chr1	1016061	1016360	(247940062)	C	AluSx1	SINE/Alu	(14)	298	1	1282
258	32.2	0.0	1.1	chr1	2038281	2038368	(246918054)	C	ERVL-E-int	LTR/ERVL	(5219)	448	362	2796
1183	27.6	10.3	2.2	chr1	2038526	2039015	(246917407)	C	LTR16E1	LTR/ERVL	(0)	538	5	2800
12	13.5	0.0	9.8	chr1	3604320	3604360	(245352062)	+	(GCAGG)n	Simple_repeat	1	41	(0)	4141
873	26.2	10.2	2.0	chr1	3878726	3879320	(245077102)	C	L1MEi	LINE/L1	(5288)	1815	1149	4497
1090	21.4	11.5	2.6	chr1	3879376	3879715	(245076707)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	4501
84	30.3	1.6	1.9	chr1	5879778	5879901	(243076521)	+	(CA)n	Simple_repeat	1	124	(0)	7391
181	20.4	1.8	10.0	chr1	6570787	6570846	(242385576)	+	L3	LINE/CR1	4038	4092	(7)	8482
658	25.3	10.7	8.2	chr1	9723470	9723950	(239232472)	C	MLT1H	LTR/ERVL-MaLR	(1)	548	14	14248
12	13.3	9.3	2.1	chr1	10033001	10033043	(238923379)	+	G-rich	Low_complexity	1	47	(0)	14941
481	25.1	9.4	8.3	chr1	12539435	12539619	(236416803)	+	MLT1H1	LTR/ERVL-MaLR	302	496	(59)	19945
1684	16.6	3.5	1.0	chr1	12539620	12539921	(236416501)	C	AluJr	SINE/Alu	(0)	312	3	19946
497	29.2	15.3	7.5	chr1	13971026	13971451	(234984971)	C	MLT1H	LTR/ERVL-MaLR	(84)	465	1	22357
3974	5.5	3.5	0.0	chr1	14973300	14973794	(233982628)	C	LTR10D	LTR/ERV1	(0)	513	1	24275
480	27.4	0.8	3.0	chr1	14973795	14973843	(233982579)	C	L2a	LINE/L2	(80)	3346	3298	24274
1726	22.1	7.8	1.8	chr1	14973848	14974339	(233982083)	C	MLT1H1	LTR/ERVL-MaLR	(4)	551	3	24276
572	30.1	18.8	2.5	chr1	17711090	17711529	(231244893)	+	MLT1H1	LTR/ERVL-MaLR	4	531	(24)	30047
870	28.7	5.7	3.7	chr1	17711643	17712072	(231244350)	+	MLT1K	LTR/ERVL-MaLR	146	584	(11)	30048
993	25.2	5.3	10.9	chr1	18489581	18490056	(230466366)	+	MLT1H	LTR/ERVL-MaLR	102	549	(0)	31765
422	26.2	7.0	10.5	chr1	18490057	18490218	(230466204)	C	MIRb	SINE/MIR	(89)	179	24	31766
628	27.4	20.6	2.8	chr1	19300252	19300544	(229655878)	+	MLT1G3	LTR/ERVL-MaLR	139	525	(54)	33392
3599	18.8	4.3	2.1	chr1	19300565	19301036	(229655386)	C	L1MB8	LINE/L1	(37)	6141	5664	33393
1239	22.9	12.8	5.2	chr1	20571312	20571757	(228384665)	+	MLT1H2	LTR/ERVL-MaLR	1	485	(4)	36078
444	26.4	1.9	12.3	chr1	20571758	20571864	(228384558)	+	MIRc	SINE/MIR	170	268	(0)	36076
1279	25.4	8.5	4.3	chr1	22373046	22373564	(226582858)	+	MLT1H1	LTR/ERVL-MaLR	1	537	(11)	40017
284	31.7	10.1	0.6	chr1	22373675	22373836	(226582586)	+	MIR3	SINE/MIR	15	193	(15)	40018
426	34.9	0.7	0.7	chr1	22719613	22719759	(226236663)	+	MIR3	SINE/MIR	46	192	(16)	40766
940	28.4	12.0	1.5	chr1	22719854	22720261	(226236161)	C	MLT1H1	LTR/ERVL-MaLR	(23)	532	76	40767
996	28.3	7.3	2.5	chr1	25598750	25599217	(223357205)	+	MLT1G3	LTR/ERVL-MaLR	1	548	(7)	47473
26	30.8	4.0	1.5	chr1	25599327	25599350	(223357072)	+	GA-rich	Low_complexity	1	23	(0)	47474
2153	14.3	1.6	0.0	chr1	25599351	25599658	(223356764)	+	AluSq	SINE/Alu	1	313	(0)	47475
2134	12.4	1.0	0.7	chr1	28094058	28094355	(220862067)	+	AluSz6	SINE/Alu	2	300	(12)	53222
1758	23.9	10.5	1.4	chr1	28094474	28094974	(220861448)	C	MLT1H1	LTR/ERVL-MaLR	(3)	552	1	53223
565	25.7	6.2	0.7	chr1	34190666	34190818	(214765604)	+	MIR	SINE/MIR	2	163	(99)	66390
591	20.9	3.5	0.7	chr1	34190819	34190958	(214765464)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	406	66391
249	19.2	1.9	0.0	chr1	34191047	34191098	(214765324)	C	MLT1H	LTR/ERVL-MaLR	(274)	275	223	66391
6431	3.1	0.3	0.0	chr1	36758726	36759470	(212196952)	+	L1PA4	LINE/L1	5409	6155	(0)	71518
1562	27.5	4.3	4.2	chr1	36759471	36759955	(212196467)	C	MLT1H1	LTR/ERVL-MaLR	(58)	497	1	71517
1196	24.1	13.0	5.8	chr1	39673270	39673811	(209282611)	+	MLT1H1	LTR/ERVL-MaLR	7	554	(1)	77179
484	24.0	6.0	3.4	chr1	39673895	39674071	(209282351)	+	MLT1K	LTR/ERVL-MaLR	147	328	(344)	77180
516	29.5	5.5	4.4	chr1	40876191	40876442	(208079980)	+	MIR	SINE/MIR	2	256	(6)	79704
589	22.9	4.8	7.7	chr1	40876511	40876704	(208079718)	+	MLT1H2	LTR/ERVL-MaLR	287	474	(15)	79705
14	4.9	0.0	0.0	chr1	47514245	47514265	(201442157)	+	(GGGA)n	Simple_repeat	1	21	(0)	91757
570	22.8	11.8	0.6	chr1	47514278	47514460	(201441962)	+	MLT1H1	LTR/ERVL-MaLR	258	448	(107)	91758
811	24.6	10.1	8.7	chr1	47526146	47526283	(201430139)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	404	91786
1774	23.3	9.8	7.0	chr1	47526284	47526814	(201429608)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	91787
1162	28.5	10.8	1.8	chr1	47729539	47729977	(201226445)	+	MLT1H1	LTR/ERVL-MaLR	73	555	(0)	92197
2378	10.4	0.0	0.0	chr1	54539930	54540237	(194416185)	+	AluSc	SINE/Alu	1	308	(1)	105328
232	23.3	0.0	0.0	chr1	54540249	54540308	(194416114)	+	L1M5	LINE/L1	5760	5819	(354)	105329
721	22.1	0.7	0.0	chr1	54540317	54540452	(194415970)	+	FLAM_C	SINE/Alu	1	137	(6)	105330
2124	11.5	0.0	0.3	chr1	54667460	54667754	(194288668)	C	AluSq2	SINE/Alu	(18)	295	2	105614
1412	12.9	0.0	12.2	chr1	54667755	54667929	(194288493)	+	AluJr4	SINE/Alu	122	262	(50)	105613
907	25.8	9.8	8.4	chr1	54667930	54668326	(194288096)	C	MLT1H2	LTR/ERVL-MaLR	(66)	423	1	105612
10836	7.4	2.2	2.5	chr1	58285056	58287337	(190669085)	+	L1PA10	LINE/L1	3890	6167	(1)	112541
641	25.0	15.6	1.9	chr1	58287344	58287741	(190668681)	C	MLT1G1	LTR/ERVL-MaLR	(47)	501	48	112542
566	18.7	6.8	0.0	chr1	59101441	59101563	(189854859)	+	L1MC4a	LINE/L1	5618	5749	(2133)	114200
1387	22.7	11.2	3.4	chr1	59101602	59102042	(189854380)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	54	114202
702	25.1	11.4	10.2	chr1	60421839	60422210	(188534212)	+	MLT1H	LTR/ERVL-MaLR	97	473	(76)	116531
562	27.7	9.0	1.0	chr1	60422280	60422483	(188533939)	C	MamRep1527	LTR	(31)	938	717	116532
1101	23.0	6.2	7.7	chr1	62097377	62097753	(186858669)	+	MLT1H	LTR/ERVL-MaLR	146	516	(33)	119482
242	22.2	1.8	0.0	chr1	62097933	62097986	(186858436)	C	MIR3	SINE/MIR	(3)	205	151	119483
2174	12.8	0.0	5.5	chr1	62097987	62098078	(186858344)	+	AluSz6	SINE/Alu	1	88	(224)	119484
1290	26.4	7.6	1.6	chr1	62880051	62880509	(186075913)	C	MLT1H2	LTR/ERVL-MaLR	(4)	545	3	120965
1140	22.7	10.4	3.6	chr1	63362905	63363347	(185593075)	+	MLT1H2	LTR/ERVL-MaLR	1	545	(4)	121936
2271	8.9	2.4	0.7	chr1	63363431	63363712	(185592710)	C	AluYc	SINE/Alu	(10)	289	3	121937
498	35.0	4.9	4.1	chr1	63715124	63715367	(185241055)	C	L2b	LINE/L2	(1)	3374	3129	122556
1070	26.6	11.7	3.7	chr1	63715427	63715785	(185240637)	C	MLT1H1	LTR/ERVL-MaLR	(8)	547	148	122557
2387	8.6	1.3	0.0	chr1	63715786	63716088	(185240334)	+	AluSp	SINE/Alu	1	307	(6)	122558
2753	8.3	0.3	5.1	chr1	65129669	65129706	(183826716)	C	THE1C	LTR/ERVL-MaLR	(344)	31	1	125161
440	22.1	0.9	0.9	chr1	65129929	65130033	(183826389)	C	MER5B	DNA/hAT-Charlie	(73)	105	1	125163
558	29.8	5.4	5.4	chr1	70502852	70503110	(178453312)	+	MIRb	SINE/MIR	10	268	(0)	133542
578	30.5	7.3	5.3	chr1	83918637	83918917	(165037505)	+	L1MEg2	LINE/L1	1	287	(6165)	151812
414	29.1	14.0	4.2	chr1	83918921	83919228	(165037194)	+	MLT1H1	LTR/ERVL-MaLR	187	514	(65)	151813
40	0.0	0.0	0.0	chr1	83919260	83919293	(165037129)	+	(GT)n	Simple_repeat	1	34	(0)	151814
533	31.1	7.5	2.9	chr1	86858081	86858484	(162097938)	+	L2b	LINE/L2	2924	3368	(58)	156234
2113	25.1	4.2	1.2	chr1	87215407	87215915	(161740507)	+	MLT1H1	LTR/ERVL-MaLR	29	553	(2)	156739
802	27.0	2.5	10.5	chr1	87490838	87491226	(161465196)	C	MLT1H1-int	LTR/ERVL-MaLR	(1048)	361	5	157132
1983	24.9	3.0	0.6	chr1	87491231	87491743	(161464679)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	30	157132
857	27.9	8.4	5.0	chr1	90280040	90280607	(158675815)	C	MLT1H1	LTR/ERVL-MaLR	(6)	549	1	161077
1103	26.3	15.7	2.6	chr1	110319103	110319604	(138636818)	+	MLT1H1	LTR/ERVL-MaLR	8	543	(12)	189919
246	25.8	9.1	10.2	chr1	110319704	110319880	(138636542)	+	L2c	LINE/L2	2744	2918	(501)	189920
211	32.3	0.0	1.5	chr1	115668265	115668330	(133288092)	C	MIRb	SINE/MIR	(14)	254	190	198520
617	30.4	9.5	5.8	chr1	115668539	115668995	(133287427)	C	MLT1H	LTR/ERVL-MaLR	(8)	541	29	198521
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
635	16.0	5.0	0.0	chr1	149006266	149006392	(99950030)	C	MLT1H2	LTR/ERVL-MaLR	(0)	548	373	216578
566	25.4	0.7	2.1	chr1	152652271	152652411	(96304011)	+	MLT1H	LTR/ERVL-MaLR	45	183	(366)	223023
299	19.8	2.4	12.0	chr1	152652425	152652516	(96303906)	+	MLT1H	LTR/ERVL-MaLR	256	338	(211)	223023
500	31.8	15.6	1.7	chr1	152652653	152652951	(96303471)	C	L1MEg1	LINE/L1	(5738)	714	373	223017
545	29.6	5.4	3.4	chr1	154776144	154776377	(94180045)	+	MIRc	SINE/MIR	25	263	(5)	226761
251	28.9	7.1	15.2	chr1	154776579	154776759	(94179663)	+	L2b	LINE/L2	3101	3277	(110)	226762
399	22.2	1.0	0.4	chr1	154778907	154779004	(94177418)	+	MLT1H	LTR/ERVL-MaLR	85	160	(329)	226766
681	15.5	13.8	2.7	chr1	154779073	154779258	(94177164)	+	MLT1H	LTR/ERVL-MaLR	340	549	(0)	226766
2173	24.1	5.6	2.2	chr1	157149605	157150140	(91806282)	+	MLT1H1	LTR/ERVL-MaLR	1	555	(0)	231336
2044	15.3	0.0	0.7	chr1	160844693	160845000	(88111422)	+	AluSz6	SINE/Alu	1	306	(6)	236359
1993	25.1	4.9	1.1	chr1	160845001	160845187	(88111235)	+	MLT1H	LTR/ERVL-MaLR	348	544	(5)	236358
1448	23.8	7.6	8.9	chr1	160845203	160845574	(88110848)	+	L1ME3	LINE/L1	1439	1815	(4925)	236357
530	25.0	3.3	5.1	chr1	162074434	162074589	(86881833)	C	MIR3	SINE/MIR	(20)	188	36	238560
1050	26.1	14.0	5.7	chr1	162074596	162075102	(86881320)	C	MLT1G1	LTR/ERVL-MaLR	(1)	578	23	238561
1421	28.1	6.6	2.3	chr1	165312423	165312903	(83643519)	+	MLT1G1	LTR/ERVL-MaLR	75	577	(2)	243439
4014	29.5	2.5	3.5	chr1	168886893	168888550	(80067872)	+	L1PBa	LINE/L1	3	1644	(5219)	249102
6181	16.7	4.6	0.9	chr1	168888518	168891308	(80065114)	+	L1PBb	LINE/L1	720	3616	(3299)	249103
1752	27.0	6.2	2.2	chr1	169061973	169062486	(79893936)	+	MLT1H1	LTR/ERVL-MaLR	1	592	(3)	249370
1360	25.3	11.8	4.7	chr1	178964668	178965136	(69991286)	+	MLT1H1	LTR/ERVL-MaLR	36	542	(13)	263915
22	22.6	1.8	0.0	chr1	178965189	178965243	(69991179)	+	(TTCC)n	Simple_repeat	1	56	(0)	263916
228	15.9	11.3	3.1	chr1	178965272	178965336	(69991086)	C	L2-3_Crp	LINE/L2	(48)	2048	1978	263917
1398	29.9	2.8	0.5	chr1	187038081	187038463	(61917959)	C	MLT1H1	LTR/ERVL-MaLR	(163)	392	1	276467
393	25.6	4.0	7.7	chr1	189186744	189186925	(59769497)	+	MLT1H2	LTR/ERVL-MaLR	296	470	(19)	279234
279	38.5	2.1	3.4	chr1	189186994	189187141	(59769281)	+	L2c	LINE/L2	3083	3228	(159)	279235
603	27.0	1.7	0.6	chr1	190928230	190928408	(58028014)	C	MLT1H2-int	LTR/ERVL-MaLR	(1227)	182	2	281518
759	23.0	1.7	1.1	chr1	190928418	190928593	(58027829)	C	MLT1H2	LTR/ERVL-MaLR	(8)	481	305	281518
428	35.8	9.4	2.1	chr1	190928585	190928821	(58027601)	C	MLT1H2	LTR/ERVL-MaLR	(215)	334	79	281518
985	26.9	13.4	4.4	chr1	198374105	198374606	(50581816)	+	MLT1H1	LTR/ERVL-MaLR	2	555	(0)	291116
260	34.0	0.9	0.0	chr1	198374648	198374753	(50581669)	+	UCON2	DNA?	399	505	(80)	291117
345	33.5	10.6	0.6	chr1	202077627	202077868	(46878554)	C	L2c	LINE/L2	(42)	3345	3075	297204
2300	7.8	3.0	0.3	chr1	202077944	202078239	(46878183)	C	AluSq	SINE/Alu	(9)	304	1	297213
2191	21.4	6.4	0.8	chr1	202677236	202677724	(46278698)	+	MLT1G1	LTR/ERVL-MaLR	39	556	(23)	298299
253	16.4	0.0	15.1	chr1	202677833	202677918	(46278504)	+	L1ME3G	LINE/L1	830	902	(22)	298300
15	18.5	1.8	7.0	chr1	203650633	203650688	(45305734)	+	G-rich	Low_complexity	1	57	(0)	300037
1150	24.4	6.8	15.9	chr1	212143237	212143681	(36812741)	C	MLT1H2	LTR/ERVL-MaLR	(4)	485	91	313973
2499	7.6	0.0	0.3	chr1	212633933	212634234	(36322188)	C	AluY	SINE/Alu	(10)	301	1	314881
239	24.3	12.3	0.0	chr1	212634235	212634279	(36322143)	+	Charlie18a	DNA/hAT-Charlie	283	330	(12)	314880
1573	28.1	6.4	1.4	chr1	212634410	212634892	(36321530)	C	MLT1H1	LTR/ERVL-MaLR	(93)	462	1	314882
825	30.0	6.0	5.1	chr1	214103885	214104430	(34851992)	C	MLT1G3	LTR/ERVL-MaLR	(9)	560	13	317185
246	16.9	3.3	0.0	chr1	217186565	217186623	(31769799)	C	L1ME4b	LINE/L1	(5)	887	827	321365
610	27.5	11.1	6.3	chr1	217186633	217186966	(31769456)	+	MLT1G1	LTR/ERVL-MaLR	213	564	(15)	321366
239	18.2	0.0	4.3	chr1	217186961	217187006	(31769416)	C	LTR23	LTR/ERV1	(72)	365	322	321367
332	16.2	4.2	0.0	chr1	217187043	217187110	(31769312)	C	L1ME4b	LINE/L1	(694)	198	128	321365
1123	25.5	10.4	6.5	chr1	218176268	218176837	(30779585)	+	MLT1G3	LTR/ERVL-MaLR	1	595	(0)	322790
901	24.6	14.1	4.7	chr1	218967352	218967735	(29988687)	C	MLT1H	LTR/ERVL-MaLR	(1)	548	123	324000
2518	8.5	0.0	0.0	chr1	221236478	221236783	(27719639)	C	AluY	SINE/Alu	(5)	306	1	327366
698	24.4	1.7	2.3	chr1	221236788	221236963	(27719459)	+	MLT1H	LTR/ERVL-MaLR	372	546	(3)	327365
696	26.8	2.3	0.0	chr1	221236968	221237176	(27719246)	C	L1M5	LINE/L1	(363)	5761	5548	327367
1204	27.6	9.2	6.7	chr1	226817180	226817577	(22138845)	C	MLT1H1	LTR/ERVL-MaLR	(1)	554	127	336532
1788	14.5	5.9	4.6	chr1	226817578	226817880	(22138542)	C	AluSz6	SINE/Alu	(5)	307	1	336533
1803	23.0	8.6	4.2	chr1	227333466	227333941	(21622481)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	51	337324
531	30.7	8.5	6.7	chr1	228224847	228225352	(20731070)	C	MLT1H1	LTR/ERVL-MaLR	(8)	547	32	338465
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
1154	24.8	10.7	2.5	chr1	230852799	230853255	(18103167)	+	MLT1H	LTR/ERVL-MaLR	6	547	(2)	342513
1170	23.1	4.8	3.1	chr1	232409454	232409907	(16546515)	+	MLT1H2	LTR/ERVL-MaLR	79	545	(4)	344930
234	33.1	5.5	3.8	chr1	232894271	232894430	(16061992)	+	MamRTE1	LINE/RTE-BovB	2889	3051	(761)	345600
1163	24.0	10.1	5.1	chr1	232894512	232895025	(16061397)	C	MLT1H	LTR/ERVL-MaLR	(3)	546	4	345601
2099	13.3	0.0	0.0	chr1	233957533	233957825	(14998597)	+	AluSq2	SINE/Alu	1	293	(20)	347164
422	26.5	6.6	8.5	chr1	233957826	233957969	(14998453)	C	MLT1H2	LTR/ERVL-MaLR	(55)	494	321	347163
1696	18.5	0.0	4.0	chr1	234345025	234345322	(14611100)	+	AluJr	SINE/Alu	5	290	(22)	347705
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
2282	11.8	0.7	0.0	chr1	242667749	242668052	(6288370)	C	AluSg	SINE/Alu	(3)	307	2	361331
13	17.8	5.3	0.0	chr1	242668055	242668092	(6288330)	+	(TGTATA)n	Simple_repeat	1	40	(0)	361332
868	24.2	16.2	2.2	chr1	242668099	242668542	(6287880)	+	MLT1H	LTR/ERVL-MaLR	18	549	(0)	361333
724	11.7	1.0	0.0	chr1	246932453	246932555	(2023867)	C	AluSx3	SINE/Alu	(2)	309	206	368364
263	35.8	2.6	1.9	chr10	1972208	1972469	(131824953)	C	MLT1H2-int	LTR/ERVL-MaLR	(1125)	284	21	373137
541	23.3	10.1	8.6	chr10	1972490	1972790	(131824632)	C	MLT1H2	LTR/ERVL-MaLR	(2)	487	182	373137
696	29.6	10.8	4.2	chr10	2858545	2858992	(130938430)	C	MLT1H2	LTR/ERVL-MaLR	(8)	481	1	374282
377	32.3	1.5	0.0	chr10	2860077	2860206	(130937216)	C	MLT1H2-int	LTR/ERVL-MaLR	(1275)	134	3	374282
899	26.4	10.5	5.4	chr10	2860222	2860681	(130936741)	C	MLT1H2	LTR/ERVL-MaLR	(3)	486	1	374282
415	27.5	8.4	4.8	chr10	3565869	3566221	(130231201)	+	MLT1H2	LTR/ERVL-MaLR	80	513	(36)	375260
346	33.8	6.6	8.6	chr10	5492111	5492343	(128305079)	+	L1ME4a	LINE/L1	5782	6009	(115)	377831
201	31.8	1.8	2.6	chr10	5492486	5492598	(128304824)	C	MIR1_Amn	SINE/MIR	(78)	152	41	377832
618	12.1	2.1	1.1	chr10	7647232	7647323	(126150099)	+	MER58A	DNA/hAT-Charlie	42	134	(90)	381357
906	23.7	6.5	0.0	chr10	7647344	7647588	(126149834)	+	MLT1H1	LTR/ERVL-MaLR	294	555	(0)	381358
264	17.9	0.0	0.0	chr10	7647589	7647626	(126149796)	+	MER102b	DNA/hAT-Charlie	302	339	(2)	381359
631	23.1	12.2	5.6	chr10	7951227	7951690	(125845732)	C	MLT1H2	LTR/ERVL-MaLR	(16)	473	12	381888
415	28.0	16.6	1.4	chr10	13397058	13397271	(120400151)	+	L2	LINE/L2	2306	2558	(861)	390720
289	22.0	0.0	0.0	chr10	13397329	13397387	(120400035)	C	MER45C	DNA/hAT-Tip100	(353)	600	542	390721
477	25.0	3.6	0.0	chr10	13397456	13397563	(120399859)	C	L2a	LINE/L2	(17)	3409	3298	390722
1979	25.6	4.8	2.3	chr10	13910035	13910557	(119886865)	+	MLT1H	LTR/ERVL-MaLR	13	549	(0)	391596
726	24.2	9.5	3.5	chr10	20307449	20307698	(113489724)	+	MIR	SINE/MIR	7	268	(0)	401906
1512	24.1	15.5	2.9	chr10	20307716	20307957	(113489465)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	243	401907
2900	1.0	0.0	0.0	chr10	20307958	20308260	(113489162)	C	AluY	SINE/Alu	(8)	303	1	401908
620	29.6	1.6	0.5	chr10	22636716	22636902	(111160520)	+	MLT1H2	LTR/ERVL-MaLR	1	189	(300)	405538
404	18.5	15.3	1.4	chr10	22636896	22637038	(111160384)	+	MLT1H2	LTR/ERVL-MaLR	305	533	(46)	405538
2440	23.6	6.7	0.4	chr10	29209644	29210157	(104587265)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	416501
360	30.5	1.2	5.2	chr10	29210158	29210246	(104587176)	+	MIR	SINE/MIR	163	245	(17)	416500
1552	23.8	7.6	2.9	chr10	29931993	29932363	(103865059)	+	MLT1H2	LTR/ERVL-MaLR	58	459	(30)	417741
2152	11.3	0.0	0.0	chr10	29932364	29932645	(103864777)	C	AluSg	SINE/Alu	(10)	300	19	417742
1272	26.1	7.2	1.6	chr10	31675868	31676295	(102121127)	C	MLT1H1	LTR/ERVL-MaLR	(79)	516	1	420590
1374	26.3	9.5	0.9	chr10	33396343	33396803	(100400619)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	45	423194
1203	18.4	5.9	2.9	chr10	34796188	34796433	(99000989)	+	MLT1H1	LTR/ERVL-MaLR	289	542	(13)	425286
702	28.8	11.7	5.2	chr10	47239238	47239699	(86557723)	+	MLT1G3	LTR/ERVL-MaLR	36	531	(24)	438921
199	29.4	17.9	7.5	chr10	51880825	51880997	(81916425)	C	L2b	LINE/L2	(1)	3386	3192	445531
318	35.2	9.1	1.2	chr10	51881069	51881229	(81916193)	C	L2b	LINE/L2	(340)	3079	2905	445531
1013	23.5	10.7	5.7	chr10	51881237	51881678	(81915744)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	83	445532
16	11.5	0.0	8.9	chr10	52666840	52666884	(81130538)	+	A-rich	Low_complexity	1	45	(0)	446606
1822	26.3	4.3	0.4	chr10	52666992	52667442	(81129980)	C	MLT1H1	LTR/ERVL-MaLR	(1)	554	86	446607
2231	11.2	1.0	0.0	chr10	69443961	69444255	(64353167)	+	AluSg4	SINE/Alu	2	299	(11)	471615
980	27.4	17.9	1.8	chr10	69444264	69444725	(64352697)	C	MLT1H	LTR/ERVL-MaLR	(5)	550	3	471616
1115	22.9	9.3	18.8	chr10	69795361	69795903	(64001519)	+	MLT1H2	LTR/ERVL-MaLR	4	489	(0)	472278
273	24.7	0.0	2.7	chr10	70333412	70333486	(63463936)	C	MLT1H2	LTR/ERVL-MaLR	(64)	425	353	473221
2083	23.7	5.9	0.8	chr10	70384665	70385174	(63412248)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	12	473340
517	27.3	2.0	3.2	chr10	70745449	70745603	(63051819)	C	L1ME4b	LINE/L1	(0)	892	740	474045
1120	23.9	14.0	5.0	chr10	70745641	70746137	(63051285)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	474046
1871	21.6	6.8	0.7	chr10	71742753	71743268	(62054154)	C	MLT1H	LTR/ERVL-MaLR	(2)	558	7	475824
986	29.4	9.1	6.1	chr10	72046337	72046912	(61750510)	C	MLT1H1	LTR/ERVL-MaLR	(0)	595	1	476427
2109	10.6	1.0	1.0	chr10	73975079	73975371	(59822051)	+	AluSq2	SINE/Alu	2	294	(19)	480294
947	25.9	10.6	11.3	chr10	73975372	73975698	(59821724)	+	MLT1H1	LTR/ERVL-MaLR	239	553	(2)	480293
1177	25.9	10.5	4.7	chr10	76038788	76039236	(57758186)	C	MLT1H2	LTR/ERVL-MaLR	(8)	481	4	483973
1229	24.3	11.5	2.4	chr10	79337873	79338370	(54459052)	C	MLT1G3	LTR/ERVL-MaLR	(1)	594	1	489449
2068	12.8	0.3	1.4	chr10	80576768	80577064	(53220358)	C	AluSz	SINE/Alu	(16)	296	3	491452
633	21.8	7.8	7.9	chr10	80577065	80577423	(53219999)	+	MLT1H1	LTR/ERVL-MaLR	176	554	(41)	491451
2568	6.6	0.0	0.0	chr10	80577424	80577725	(53219697)	C	AluY	SINE/Alu	(9)	302	1	491453
315	21.7	5.5	0.0	chr10	84541656	84541724	(49255698)	+	MLT1H2	LTR/ERVL-MaLR	80	152	(337)	497006
1337	27.0	8.8	7.2	chr10	97944555	97945057	(35852365)	+	MLT1H1	LTR/ERVL-MaLR	1	518	(37)	519058
815	24.3	9.3	10.1	chr10	104510696	104511171	(29286251)	C	MLT1H2	LTR/ERVL-MaLR	(1)	488	17	530827
243	27.8	0.0	6.5	chr10	112847813	112847889	(20949533)	C	L2b	LINE/L2	(0)	3375	3304	543303
646	16.8	2.2	5.1	chr10	112847953	112848090	(20949332)	+	MLT1H2	LTR/ERVL-MaLR	356	489	(0)	543304
1868	22.4	2.0	8.3	chr10	113571067	113571642	(20225780)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	11	544548
886	22.8	10.3	1.1	chr10	115017908	115018267	(18779155)	+	L2a	LINE/L2	2777	3193	(233)	546949
1401	24.3	11.9	2.7	chr10	115018276	115018847	(18778575)	C	MLT1G	LTR/ERVL-MaLR	(0)	595	1	546950
10340	24.1	5.4	2.9	chr10	115417708	115420039	(18377383)	+	L1MA6	LINE/L1	1776	4175	(3387)	547418
1086	27.1	9.3	2.1	chr10	117144853	117145338	(16652084)	+	MLT1G1	LTR/ERVL-MaLR	12	579	(0)	549946
535	27.4	1.4	0.7	chr10	117145340	117145486	(16651936)	C	MIRb	SINE/MIR	(118)	150	3	549945
569	21.1	8.4	2.6	chr10	117654064	117654219	(16143203)	C	MIR3	SINE/MIR	(6)	202	37	550825
1011	22.7	6.3	10.5	chr10	117654242	117654659	(16142763)	C	MLT1H2	LTR/ERVL-MaLR	(6)	483	85	550826
1278	30.0	6.9	2.6	chr10	121618996	121619525	(12177897)	C	MLT1H1	LTR/ERVL-MaLR	(1)	554	1	557417
852	27.5	14.0	5.4	chr10	123385512	123385963	(10411459)	C	MLT1H	LTR/ERVL-MaLR	(15)	474	15	560224
543	34.5	5.7	2.0	chr10	123718316	123718617	(10078805)	+	MLT1K	LTR/ERVL-MaLR	26	339	(256)	560799
815	24.0	6.1	9.3	chr10	123718633	123718986	(10078436)	C	MLT1H2	LTR/ERVL-MaLR	(8)	481	140	560800
2722	21.7	1.9	1.0	chr10	123719003	123719700	(10077722)	C	L1ME1	LINE/L1	(253)	5926	5214	560801
821	31.8	10.9	2.2	chr10	125326464	125326922	(8470500)	+	MLT1H1	LTR/ERVL-MaLR	3	506	(49)	563344
526	19.4	18.2	0.0	chr10	125326923	125327061	(8470361)	C	MER96	DNA/hAT-Tip100	(0)	175	6	563345
1266	25.6	11.6	4.1	chr10	125537963	125538472	(8258950)	C	MLT1H1	LTR/ERVL-MaLR	(2)	553	1	563659
2152	13.5	2.8	3.1	chr10	128147113	128147472	(5649950)	+	THE1B	LTR/ERVL-MaLR	2	360	(4)	567079
1289	24.4	4.9	11.1	chr10	128233520	128234040	(5563382)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	3	567198
2372	11.8	16.7	0.9	chr10	130227526	130227953	(3569469)	C	MER87B	LTR/ERV1	(0)	509	1	569284
1048	20.1	5.1	12.5	chr10	130227954	130228231	(3569191)	+	MLT1G3	LTR/ERVL-MaLR	245	488	(1)	569283
444	25.8	5.2	9.5	chr10	131707030	131707388	(2090034)	+	MLT1H	LTR/ERVL-MaLR	66	533	(16)	570848
64	32.3	0.5	0.0	chr10	131732405	131732607	(2064815)	+	(CACA)n	Simple_repeat	1	204	(0)	570870
513	21.9	2.5	9.9	chr10	131732659	131732893	(2064529)	+	MLT1H	LTR/ERVL-MaLR	272	548	(1)	570871
228	33.6	7.6	4.6	chr10	131885724	131885876	(1911546)	C	MIRc	SINE/MIR	(1)	267	110	571036
694	26.1	21.1	0.7	chr10	131964495	131965053	(1832369)	C	L1MC4a	LINE/L1	(1298)	6584	5899	571128
247	28.4	12.4	8.4	chr10	131965227	131965441	(1831981)	C	MLT1G3	LTR/ERVL-MaLR	(296)	299	75	571129
411	28.9	9.6	7.7	chr10	132384628	132384976	(1412446)	C	MLT1H1	LTR/ERVL-MaLR	(1)	554	199	571599
339	25.1	18.4	1.0	chr10	132939154	132939354	(858068)	C	L2c	LINE/L2	(223)	3164	2921	572060
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
318	29.1	7.8	3.5	chr11	2557243	2557413	(132529209)	+	L1MC	LINE/L1	2427	2605	(3541)	575924
454	30.3	3.3	0.0	chr11	2557474	2557618	(132529004)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	430	575925
594	26.6	6.8	3.9	chr11	2999473	2999907	(132086715)	+	MLT1H2	LTR/ERVL-MaLR	45	549	(0)	576416
1042	26.1	6.0	5.2	chr11	14927256	14927655	(120158967)	C	MLT1H	LTR/ERVL-MaLR	(8)	541	139	594705
1160	25.6	11.1	3.3	chr11	15303879	15304366	(119782256)	+	MLT1H	LTR/ERVL-MaLR	7	537	(12)	595284
320	34.7	1.8	5.1	chr11	15556306	15556413	(119530209)	C	HAL1ME	LINE/L1	(1385)	1080	978	595697
1751	21.4	5.7	0.3	chr11	15556867	15557251	(119529371)	+	MLT1A1	LTR/ERVL-MaLR	1	407	(1)	595699
976	23.2	10.7	3.8	chr11	15636617	15637034	(119449588)	C	MLT1H	LTR/ERVL-MaLR	(18)	531	1	595850
531	27.1	6.5	3.1	chr11	21301869	21302062	(113784560)	C	MIRb	SINE/MIR	(65)	203	3	605274
889	26.7	3.8	1.7	chr11	21302063	21302489	(113784133)	C	MLT1H2	LTR/ERVL-MaLR	(0)	548	93	605275
1009	29.3	5.4	2.1	chr11	27009988	27010453	(108076169)	+	MLT1H2	LTR/ERVL-MaLR	3	489	(0)	613290
514	28.0	9.3	2.3	chr11	27010472	27010690	(108075932)	+	L2a	LINE/L2	3189	3424	(2)	613291
939	27.7	10.4	7.8	chr11	27160565	27161125	(107925497)	+	MLT1H1	LTR/ERVL-MaLR	1	577	(2)	613489
817	25.6	10.8	8.9	chr11	27949640	27950133	(107136489)	C	MLT1H1	LTR/ERVL-MaLR	(2)	553	50	614829
2263	27.6	8.8	3.7	chr11	33593448	33594121	(101492501)	C	L2a	LINE/L2	(611)	2808	2074	623773
1212	27.0	3.0	8.4	chr11	33594252	33594704	(101491918)	C	MLT1H2	LTR/ERVL-MaLR	(4)	485	58	623775
675	24.7	10.1	11.5	chr11	34022103	34022583	(101064039)	+	MLT1H1	LTR/ERVL-MaLR	3	480	(75)	624538
1379	9.4	0.0	0.0	chr11	34022584	34022753	(101063869)	C	AluSx	SINE/Alu	(16)	296	127	624539
11	16.4	5.9	0.0	chr11	35932152	35932185	(99154437)	+	(TGAGAA)n	Simple_repeat	1	36	(0)	627582
330	27.1	8.2	5.9	chr11	35932302	35932631	(99153991)	C	MLT1H2	LTR/ERVL-MaLR	(164)	385	19	627583
25	21.4	0.0	0.0	chr11	36309951	36310005	(98776617)	+	(CCA)n	Simple_repeat	1	55	(0)	628227
737	24.5	10.0	4.9	chr11	43353738	43354198	(91732424)	+	MLT1H2	LTR/ERVL-MaLR	38	545	(4)	638326
189	9.1	0.0	8.3	chr11	43354210	43354245	(91732377)	C	MamTip2	DNA/hAT-Tip100	(88)	217	185	638327
1453	29.0	6.8	6.2	chr11	43456482	43458002	(91628620)	+	L1MC5	LINE/L1	11	2641	(4909)	638488
293	25.2	11.2	6.9	chr11	43458044	43458188	(91628434)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	398	638489
398	26.1	12.3	6.6	chr11	43458323	43458535	(91628087)	C	MLT1H	LTR/ERVL-MaLR	(288)	267	41	638489
1136	26.7	4.3	4.7	chr11	44460571	44461014	(90625608)	C	LTR33	LTR/ERVL	(73)	442	1	640157
935	24.7	7.8	5.0	chr11	44461064	44461562	(90625060)	C	MLT1G	LTR/ERVL-MaLR	(36)	533	7	640158
1729	22.4	12.1	5.1	chr11	44626507	44627013	(90459609)	+	MLT1H	LTR/ERVL-MaLR	1	547	(2)	640505
746	27.1	1.5	6.7	chr11	44627026	44627290	(90459332)	C	MIRb	SINE/MIR	(1)	267	19	640506
249	21.1	6.2	6.2	chr11	45287268	45287363	(89799259)	+	L2c	LINE/L2	2286	2381	(1038)	641814
606	26.6	9.2	5.9	chr11	45287402	45287797	(89798825)	C	MLT1H2	LTR/ERVL-MaLR	(2)	577	184	641815
1584	23.9	12.8	1.7	chr11	45292129	45292592	(89794030)	+	MLT1H	LTR/ERVL-MaLR	2	524	(25)	641827
251	20.5	10.4	4.3	chr11	45292608	45292724	(89793898)	+	MIR	SINE/MIR	138	262	(0)	641823
463	26.3	8.5	20.7	chr11	46526284	46526810	(88559812)	+	MLT1H2	LTR/ERVL-MaLR	20	476	(13)	644104
1344	27.0	8.8	3.3	chr11	57273289	57273778	(77812844)	+	MLT1H1	LTR/ERVL-MaLR	36	555	(0)	653381
315	27.9	5.5	2.8	chr11	61198886	61198992	(73887630)	+	MIRc	SINE/MIR	48	157	(111)	659693
1508	22.8	9.8	8.0	chr11	61199246	61199783	(73886839)	C	MLT1F2	LTR/ERVL-MaLR	(11)	549	1	659694
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
937	15.8	0.0	0.0	chr11	64173492	64173624	(70912998)	C	FLAM_C	SINE/Alu	(10)	133	1	665113
250	15.0	11.1	0.0	chr11	64173625	64173704	(70912918)	C	MamRep1151	LTR?	(355)	354	265	665114
445	24.7	8.8	3.9	chr11	64173717	64173970	(70912652)	C	MLT1H2	LTR/ERVL-MaLR	(0)	579	256	665115
245	32.1	5.8	0.0	chr11	64179036	64179116	(70907506)	C	L2b	LINE/L2	(0)	3375	3290	665127
1516	24.7	7.8	2.9	chr11	64179304	64179824	(70906798)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	7	665128
2167	8.8	6.1	1.0	chr11	66979047	66979342	(68107280)	+	AluSq2	SINE/Alu	2	313	(0)	670628
817	30.5	8.5	4.5	chr11	66979343	66979599	(68107023)	+	MLT1H1	LTR/ERVL-MaLR	244	520	(35)	670627
1359	18.8	2.8	0.7	chr11	66979600	66979878	(68106744)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	183	670629
1153	27.0	9.1	2.2	chr11	69473334	69473791	(65612831)	+	MLT1H	LTR/ERVL-MaLR	52	544	(5)	675150
778	22.4	5.1	3.6	chr11	69734452	69734701	(65351921)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	302	675605
20	0.0	6.7	0.0	chr11	69734718	69734747	(65351875)	+	(TCAT)n	Simple_repeat	1	32	(0)	675606
34	0.0	0.0	0.0	chr11	69734748	69734776	(65351846)	+	(TC)n	Simple_repeat	1	29	(0)	675607
2282	10.5	0.3	0.0	chr11	73627422	73627716	(61458906)	C	AluSx1	SINE/Alu	(15)	297	2	682278
1195	23.7	2.5	12.1	chr11	73627717	73628174	(61458448)	C	MLT1H	LTR/ERVL-MaLR	(69)	480	60	682277
1583	23.8	6.9	0.8	chr11	75703006	75703479	(59383143)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	686595
387	25.8	17.7	0.0	chr11	76625443	76625609	(58461013)	C	MIR	SINE/MIR	(12)	250	48	688350
1262	27.3	10.7	5.3	chr11	76625730	76626275	(58460347)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	1	688351
2309	8.8	0.7	1.0	chr11	86293683	86293978	(48792644)	+	AluSq2	SINE/Alu	1	295	(18)	705316
1649	22.9	11.0	0.6	chr11	86294011	86294490	(48792132)	C	MLT1H	LTR/ERVL-MaLR	(6)	543	8	705317
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
2315	10.8	0.3	1.0	chr11	102137877	102138183	(32948439)	C	AluSg	SINE/Alu	(4)	306	2	727453
417	25.6	15.3	5.1	chr11	102138213	102138557	(32948065)	C	MLT1H	LTR/ERVL-MaLR	(6)	549	152	727454
781	30.7	12.6	0.9	chr11	110778484	110778911	(24307711)	C	L2a	LINE/L2	(5)	3421	2937	740318
1660	23.4	7.4	4.4	chr11	110778915	110779437	(24307185)	+	MLT1H1	LTR/ERVL-MaLR	1	540	(15)	740319
24	6.1	2.9	0.0	chr11	110779447	110779480	(24307142)	+	(AG)n	Simple_repeat	1	35	(0)	740320
351	37.6	0.6	3.8	chr11	110779595	110779779	(24306843)	C	L1M2	LINE/L1	(1920)	4223	4045	740321
974	28.0	9.6	7.5	chr11	112666341	112666877	(22419745)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	1	743474
436	27.7	0.0	0.0	chr11	114191871	114191964	(20894658)	C	L2a	LINE/L2	(564)	2855	2762	745868
677	28.8	11.9	4.5	chr11	114191965	114192458	(20894164)	C	MLT1H	LTR/ERVL-MaLR	(13)	536	1	745878
2034	24.5	6.2	1.1	chr11	114907625	114908145	(20178477)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	746886
865	26.3	4.5	12.7	chr11	118700360	118700777	(16385845)	+	MLT1H	LTR/ERVL-MaLR	103	491	(58)	753382
1948	15.9	0.0	0.7	chr11	118700778	118701099	(16385523)	C	AluJb	SINE/Alu	(0)	312	2	753384
2172	13.9	8.2	1.3	chr11	130174552	130174937	(4911685)	+	LTR62	LTR/ERVL	2	416	(293)	771476
912	25.1	20.0	5.2	chr12	4833137	4833599	(128441710)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	786151
8391	2.0	1.0	0.1	chr12	7212991	7214729	(126060580)	+	L1PA3	LINE/L1	4405	6155	(0)	790101
6171	19.6	9.0	3.7	chr12	12384282	12384685	(120890624)	C	L1ME1	LINE/L1	(1363)	1216	800	798065
478	18.8	13.6	0.8	chr12	12384712	12384845	(120890464)	C	MLT1F1	LTR/ERVL-MaLR	(52)	517	364	798071
1743	31.4	5.9	4.0	chr12	12384901	12385511	(120889798)	C	L1ME1	LINE/L1	(1769)	810	171	798065
615	26.5	9.2	13.3	chr12	15938931	15939418	(117335891)	+	MLT1H2	LTR/ERVL-MaLR	22	487	(2)	803553
4683	24.8	7.3	3.5	chr12	15939422	15940342	(117334967)	C	BLACKJACK	DNA/hAT-Blackjack	(868)	2101	1152	803552
1750	23.4	5.5	1.6	chr12	16619711	16620097	(116655212)	C	MLT1H2	LTR/ERVL-MaLR	(84)	405	3	804494
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
1468	24.5	5.9	2.1	chr12	30154068	30154537	(103120772)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	14	823340
1185	22.9	4.4	0.3	chr12	32287120	32287421	(100987888)	+	Charlie4a	DNA/hAT-Charlie	17	331	(177)	827201
693	26.2	13.2	8.2	chr12	32287422	32287531	(100987778)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	427	827202
2515	7.9	0.0	0.3	chr12	32287532	32287836	(100987473)	C	AluY	SINE/Alu	(7)	304	1	827203
860	25.2	7.5	4.2	chr12	41988802	41989250	(91286059)	C	MLT1H2	LTR/ERVL-MaLR	(9)	540	87	835803
2451	11.1	0.3	0.0	chr12	50467971	50468277	(82807032)	C	AluSg	SINE/Alu	(2)	308	1	849304
323	25.1	10.3	9.8	chr12	50468278	50468294	(82807015)	C	HAL1	LINE/L1	(173)	2334	2334	849303
2600	6.3	0.3	1.3	chr12	50468295	50468596	(82806713)	C	AluY	SINE/Alu	(12)	299	1	849305
5868	22.8	1.8	4.5	chr12	56497590	56499117	(76776192)	C	HERVK13-int	LTR/ERVK	(5669)	2447	963	859648
219	18.8	2.0	2.0	chr12	57538043	57538091	(75737218)	C	MIRb	SINE/MIR	(2)	266	218	861482
35	0.0	0.0	0.0	chr12	65511164	65511195	(67764114)	+	(TCC)n	Simple_repeat	1	32	(0)	872891
904	26.9	11.5	4.0	chr12	68022119	68022612	(65252697)	+	MLT1H	LTR/ERVL-MaLR	17	547	(2)	876759
567	23.4	8.9	4.2	chr12	77736303	77736516	(55538793)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	265	891217
2210	23.2	9.0	0.2	chr12	89734189	89734693	(43540616)	+	MLT1H1	LTR/ERVL-MaLR	2	555	(0)	907509
191	32.0	1.3	4.9	chr12	89734722	89734803	(43540506)	C	L2a	LINE/L2	(38)	3388	3310	907510
2163	20.8	0.5	5.7	chr12	89734804	89735242	(43540067)	C	MLT2B1	LTR/ERVL	(0)	520	105	907511
696	25.4	11.6	6.9	chr12	92583862	92584221	(40691088)	+	MLT1H	LTR/ERVL-MaLR	95	533	(16)	911791
699	23.1	5.9	13.5	chr12	93710021	93710333	(39564976)	C	MLT1H2	LTR/ERVL-MaLR	(35)	454	163	914001
2450	10.0	0.3	0.0	chr12	93710334	93710644	(39564665)	C	AluSx	SINE/Alu	(0)	312	1	914002
1877	21.1	1.6	0.6	chr12	94039190	94039563	(39235746)	C	MLT2D	LTR/ERVL	(42)	514	4	914550
888	25.2	2.3	1.2	chr12	94039564	94039752	(39235557)	+	MLT1H1	LTR/ERVL-MaLR	385	577	(2)	914549
388	31.2	5.3	0.8	chr12	94039914	94040105	(39235204)	+	MIRc	SINE/MIR	50	248	(20)	914551
1581	26.2	7.5	6.0	chr12	96176348	96176883	(37098426)	+	MLT1H	LTR/ERVL-MaLR	5	549	(0)	918613
441	30.9	2.2	11.0	chr12	96176884	96176921	(37098388)	+	MIR3	SINE/MIR	174	203	(5)	918611
1317	21.9	9.4	2.7	chr12	97956994	97957438	(35317871)	+	MLT1H	LTR/ERVL-MaLR	72	549	(0)	921440
203	22.7	0.0	2.2	chr12	97957441	97957485	(35317824)	C	L2a	LINE/L2	(1099)	2320	2277	921439
964	21.1	1.2	1.0	chr12	97957504	97957769	(35317540)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	287	921441
361	18.1	1.2	2.4	chr12	101959573	101959657	(31315652)	C	MIR	SINE/MIR	(48)	214	131	928350
1209	23.9	12.2	9.7	chr12	101959689	101960215	(31315094)	C	MLT1G1	LTR/ERVL-MaLR	(8)	571	1	928351
848	19.1	9.2	7.0	chr12	103842913	103843073	(29432236)	C	MER2	DNA/TcMar-Tigger	(147)	198	3	931392
242	19.1	6.8	1.4	chr12	107347210	107347278	(25928031)	C	L2a	LINE/L2	(7)	3419	3347	937923
19	12.0	0.0	2.6	chr12	107347279	107347324	(25927985)	+	(ATATAA)n	Simple_repeat	1	44	(0)	937924
589	24.6	17.7	5.6	chr12	107347354	107347856	(25927453)	C	MLT1G1	LTR/ERVL-MaLR	(2)	577	1	937925
281	26.3	23.8	4.4	chr12	107389290	107389500	(25885809)	C	MIRb	SINE/MIR	(1)	261	2	938029
586	26.5	7.8	1.3	chr12	107389579	107389824	(25885485)	C	MLT1H2	LTR/ERVL-MaLR	(0)	555	289	938030
52	2.1	0.0	0.0	chr12	107389835	107389883	(25885426)	+	(TG)n	Simple_repeat	1	49	(0)	938031
1498	17.6	4.9	2.0	chr12	110111962	110112145	(23163164)	C	AluJb	SINE/Alu	(119)	193	1	944061
921	22.8	7.7	10.8	chr12	110112148	110112561	(23162748)	+	MLT1H2	LTR/ERVL-MaLR	68	480	(9)	944063
489	23.3	9.1	3.9	chr12	110112562	110112574	(23162735)	C	MER112	DNA/hAT-Charlie	(94)	167	158	944064
2413	10.3	0.3	1.0	chr12	110112575	110112884	(23162425)	+	AluSz	SINE/Alu	1	308	(4)	944065
1499	21.2	4.2	0.7	chr12	110971232	110971526	(22303783)	C	MLT1H1	LTR/ERVL-MaLR	(2)	553	248	946023
370	26.5	1.0	1.0	chr12	110971526	110971624	(22303685)	C	MLT1H1	LTR/ERVL-MaLR	(488)	103	5	946023
916	31.4	8.5	11.7	chr12	111304479	111305246	(21970063)	C	MamGypLTR3a	LTR/Gypsy	(2)	979	239	946756
369	21.8	6.8	0.9	chr12	112171549	112171659	(21103650)	C	L1MC4a	LINE/L1	(1)	7881	7764	948620
2438	7.5	0.3	0.0	chr12	112171911	112172202	(21103107)	C	AluSp	SINE/Alu	(20)	293	1	948621
1814	15.7	1.0	3.1	chr12	112288346	112288639	(20986670)	+	AluJr	SINE/Alu	6	293	(19)	948848
1862	22.9	8.2	4.5	chr12	112288640	112288962	(20986347)	+	MLT1H2	LTR/ERVL-MaLR	132	489	(0)	948846
15	5.6	0.0	0.0	chr12	112506437	112506455	(20768854)	+	(T)n	Simple_repeat	1	19	(0)	949388
485	24.4	14.7	6.6	chr12	112506600	112506946	(20768363)	C	MLT1H	LTR/ERVL-MaLR	(16)	533	154	949389
52	0.0	0.0	0.0	chr12	112506947	112506993	(20768316)	+	(TGA)n	Simple_repeat	1	47	(0)	949390
399	21.4	5.3	3.7	chr12	112755451	112755620	(20519689)	+	MLT1H2	LTR/ERVL-MaLR	52	217	(272)	950028
1333	13.5	3.9	1.8	chr12	112755965	112756191	(20519118)	+	L1MA5	LINE/L1	6008	6239	(61)	950029
969	24.4	3.7	10.3	chr12	112851922	112852322	(20422987)	C	MLT1H2	LTR/ERVL-MaLR	(0)	549	152	950245
303	29.7	0.8	9.9	chr12	113751428	113751569	(19523740)	C	MER5A	DNA/hAT-Charlie	(6)	183	55	952411
995	23.7	16.8	5.8	chr12	113751602	113752080	(19523229)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	14	952412
345	23.5	15.0	0.0	chr12	114026783	114026901	(19248408)	C	L2a	LINE/L2	(5)	3421	3282	953013
1191	24.7	9.8	3.6	chr12	114026902	114027367	(19247942)	C	MLT1H2	LTR/ERVL-MaLR	(14)	535	14	953014
1581	22.0	10.6	1.2	chr12	114292882	114293308	(18982001)	+	MLT1H	LTR/ERVL-MaLR	5	476	(73)	953407
1051	25.0	0.4	1.6	chr12	114293476	114293723	(18981586)	C	MIR	SINE/MIR	(0)	262	18	953408
1905	27.1	8.1	1.5	chr12	114963383	114963554	(18311755)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	362	954981
1155	22.7	1.8	0.0	chr12	114963555	114963774	(18311535)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	954982
348	8.9	1.8	0.0	chr12	115134372	115134427	(18140882)	+	L1MA5A	LINE/L1	6238	6294	(3)	955352
317	22.9	0.0	1.4	chr12	115134436	115134506	(18140803)	C	MLT1H2	LTR/ERVL-MaLR	(61)	428	359	955349
1721	29.6	4.7	3.3	chr12	117843492	117844061	(15431248)	+	LTR33C	LTR/ERVL	48	625	(4)	961194
629	23.0	8.0	7.5	chr12	117844130	117844363	(15430946)	+	MLT1H2	LTR/ERVL-MaLR	260	517	(78)	961195
2960	15.1	3.0	6.9	chr12	117844364	117844864	(15430445)	+	LTR45C	LTR/ERV1	1	480	(59)	961196
500	30.4	6.4	2.4	chr12	117917805	117918054	(15357255)	+	MER102c	DNA/hAT-Charlie	3	278	(2150)	961394
669	27.9	8.5	1.1	chr12	119151308	119151492	(14123817)	+	MIRb	SINE/MIR	41	240	(28)	964100
2032	21.4	12.1	0.6	chr12	119151537	119152012	(14123297)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	12	964101
677	29.1	6.4	3.8	chr12	120836117	120836596	(12438713)	+	MLT1H	LTR/ERVL-MaLR	21	506	(73)	967943
1206	26.2	2.6	6.8	chr12	120836597	120837038	(12438271)	+	L1MD2	LINE/L1	5924	6346	(13)	967944
790	27.9	11.3	4.1	chr12	121158174	121158682	(12116627)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	6	968716
370	25.2	1.4	11.5	chr12	121815089	121815144	(11460165)	C	MER3	DNA/hAT-Charlie	(0)	209	160	970370
876	15.9	0.0	0.0	chr12	121815145	121815270	(11460039)	+	FLAM_C	SINE/Alu	1	126	(17)	970371
2064	26.9	2.1	0.3	chr12	124113383	124113875	(9161434)	+	MLT1H1	LTR/ERVL-MaLR	12	525	(54)	975480
2320	8.1	0.3	0.0	chr12	124113876	124114160	(9161149)	C	AluY	SINE/Alu	(25)	286	1	975481
1203	23.4	16.1	4.4	chr12	124666677	124667181	(8608128)	+	MLT1G1	LTR/ERVL-MaLR	2	577	(2)	976530
1698	24.9	7.0	4.1	chr12	124757129	124757659	(8517650)	+	MLT1H	LTR/ERVL-MaLR	3	549	(0)	976762
238	33.6	8.6	6.2	chr12	124757761	124758033	(8517276)	C	L2c	LINE/L2	(83)	3304	3025	976763
689	24.1	17.6	11.4	chr12	128827589	128828043	(4447266)	+	MLT1H2	LTR/ERVL-MaLR	1	489	(0)	983936
459	32.2	1.1	4.3	chr12	128828044	128828154	(4447155)	+	MER102c	DNA/hAT-Charlie	153	262	(69)	983935
332	27.2	11.1	4.5	chr12	128828155	128828331	(4446978)	+	MER3	DNA/hAT-Charlie	20	209	(0)	983937
1020	31.6	2.6	5.7	chr12	129680635	129681144	(3594165)	C	LTR33A	LTR/ERVL	(8)	512	19	985471
1840	27.6	3.1	2.9	chr12	129681234	129681779	(3593530)	C	MLT1H1	LTR/ERVL-MaLR	(8)	547	1	985472
1129	20.1	8.7	8.7	chr12	129765600	129765864	(3509445)	+	LTR37A	LTR/ERV1	168	426	(0)	985614
797	30.1	5.4	1.8	chr12	129765917	129766258	(3509051)	+	MLT1I	LTR/ERVL-MaLR	15	369	(42)	985616
2158	12.3	0.0	2.9	chr12	130848657	130848946	(2426363)	+	AluSx1	SINE/Alu	1	285	(27)	987318
43	0.0	0.0	0.0	chr12	130848947	130848985	(2426324)	+	(AAAT)n	Simple_repeat	1	39	(0)	987319
2158	12.3	0.0	2.9	chr12	130848986	130849004	(2426305)	+	AluSx1	SINE/Alu	286	301	(11)	987318
858	17.6	2.5	7.4	chr12	130849017	130849148	(2426161)	+	MLT1H2	LTR/ERVL-MaLR	286	408	(81)	987320
2767	11.3	6.5	1.1	chr12	130849149	130849411	(2425898)	C	MER4C	LTR/ERV1	(0)	465	179	987321
586	25.0	4.4	3.9	chr12	131234012	131234215	(2041094)	+	MLT1H1	LTR/ERVL-MaLR	333	537	(18)	987890
575	24.1	2.5	5.9	chr12	131430255	131430457	(1844852)	C	MLT1H2	LTR/ERVL-MaLR	(4)	485	290	988106
719	27.9	14.1	0.5	chr12	132208410	132208819	(1066490)	+	MLT1H	LTR/ERVL-MaLR	75	549	(0)	989215
311	26.0	6.6	0.0	chr12	132374443	132374569	(900740)	C	MLT1H	LTR/ERVL-MaLR	(13)	536	401	989389
314	21.2	9.0	8.3	chr12	132611704	132611847	(663462)	C	MLT1H2	LTR/ERVL-MaLR	(24)	465	321	989665
517	28.1	13.0	8.6	chr12	132611837	132612195	(663114)	C	MLT1F1	LTR/ERVL-MaLR	(109)	460	84	989666
745	22.2	7.8	2.8	chr13	21001339	21001739	(93362589)	+	MLT1H2	LTR/ERVL-MaLR	18	432	(57)	995288
1066	12.0	0.0	0.0	chr13	21001744	21001885	(93362443)	+	AluSc8	SINE/Alu	147	288	(23)	995289
18693	16.5	4.3	2.2	chr13	40812799	40816859	(73547469)	+	L1PA16	LINE/L1	829	5395	(2746)	1024760
926	26.9	11.4	5.0	chr13	46159869	46160392	(68203936)	+	MLT1G1	LTR/ERVL-MaLR	18	579	(0)	1033438
225	20.4	2.0	0.0	chr13	46504025	46504073	(67860255)	+	L1M4	LINE/L1	4188	4237	(1909)	1034012
552	25.6	13.0	2.9	chr13	46504154	46504394	(67859934)	C	MLT1H1	LTR/ERVL-MaLR	(30)	525	257	1034013
503	24.6	0.8	0.0	chr13	57554020	57554137	(56810191)	C	MLT1H2	LTR/ERVL-MaLR	(2)	487	369	1049720
402	22.5	0.0	0.0	chr13	57554220	57554290	(56810038)	C	AluJr	SINE/Alu	(233)	79	9	1049721
4033	18.8	13.4	4.5	chr13	65812405	65813329	(48550999)	+	LTR28	LTR/ERV1	1	1020	(0)	1060247
1595	11.6	3.2	1.2	chr13	66539279	66539522	(47824806)	+	THE1C	LTR/ERVL-MaLR	1	249	(126)	1061166
625	19.7	0.7	10.1	chr13	66539555	66539712	(47824616)	+	MLT1H	LTR/ERVL-MaLR	405	547	(2)	1061167
6480	14.9	1.6	0.4	chr13	69119385	69120437	(45243891)	+	L1PB1	LINE/L1	4	1069	(5794)	1064382
1128	18.9	2.1	0.4	chr13	77487384	77487611	(36876717)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	134	1076279
2060	16.3	3.6	2.9	chr13	77487612	77488027	(36876301)	+	MER57F	LTR/ERV1	1	419	(16)	1076280
2120	8.4	0.0	0.0	chr13	93965168	93965429	(20398899)	+	AluY	SINE/Alu	39	300	(11)	1097622
1024	31.0	4.7	4.3	chr13	93965441	93965902	(20398426)	+	MLT1H	LTR/ERVL-MaLR	71	534	(15)	1097623
2172	25.1	4.7	0.2	chr13	94726245	94726774	(19637554)	+	MLT1H1	LTR/ERVL-MaLR	1	555	(0)	1098800
1608	20.5	8.6	4.2	chr13	97784310	97784805	(16579523)	+	MLT1A0	LTR/ERVL-MaLR	13	478	(71)	1103471
493	26.6	11.7	5.1	chr13	98934205	98934561	(15429767)	+	MLT1H2	LTR/ERVL-MaLR	145	554	(1)	1105437
362	29.7	8.6	0.0	chr13	102940644	102940771	(11423557)	C	MIRb	SINE/MIR	(3)	265	126	1111510
468	24.2	15.2	0.0	chr13	102940790	102941080	(11423248)	+	MLT1F	LTR/ERVL-MaLR	215	546	(2)	1111511
231	35.6	7.3	3.0	chr13	111568834	111569080	(2795248)	+	L2c	LINE/L2	3097	3349	(26)	1122670
305	17.1	7.9	1.2	chr13	111569240	111569322	(2795006)	C	MLT1H2	LTR/ERVL-MaLR	(74)	415	327	1122671
244	24.1	1.2	2.5	chr13	111569290	111569370	(2794958)	C	MLT1H2	LTR/ERVL-MaLR	(124)	445	366	1122671
235	29.9	7.3	6.8	chr13	111569419	111569594	(2794734)	C	MLT1H2	LTR/ERVL-MaLR	(319)	236	60	1122671
2003	25.5	5.3	1.7	chr14	21149920	21150441	(85893277)	C	MLT1H1	LTR/ERVL-MaLR	(2)	553	12	1129192
20	14.0	0.0	0.0	chr14	22598341	22598372	(84445346)	+	(CT)n	Simple_repeat	1	32	(0)	1131386
16	35.7	2.5	3.2	chr14	26597952	26597985	(80445733)	+	(CGC)n	Simple_repeat	1	124	(0)	1137002
26	23.9	2.3	2.2	chr14	26597986	26598072	(80445646)	+	(CGCTGC)n	Simple_repeat	1	89	(0)	1137003
27	22.9	0.9	7.1	chr14	26598275	26598385	(80445333)	+	G-rich	Low_complexity	1	112	(0)	1137004
434	27.9	4.1	10.1	chr14	33220946	33221367	(73822351)	C	MLT1H	LTR/ERVL-MaLR	(7)	542	60	1146127
1932	25.4	8.5	2.3	chr14	37053952	37054470	(69989248)	+	MLT1H1	LTR/ERVL-MaLR	2	555	(0)	1152400
614	21.1	7.9	12.6	chr14	37054475	37054713	(69989005)	+	MLT1H1-int	LTR/ERVL-MaLR	5	231	(1178)	1152400
2146	21.4	5.8	1.8	chr14	49480914	49481423	(57562295)	+	MLT1H	LTR/ERVL-MaLR	16	547	(2)	1167988
247	28.7	3.1	2.1	chr14	50020047	50020142	(57023576)	C	Charlie15a	DNA/hAT-Charlie	(33)	191	95	1169110
1029	25.8	9.5	5.5	chr14	50020294	50020785	(57022933)	C	MLT1H	LTR/ERVL-MaLR	(35)	514	1	1169111
487	28.2	6.7	12.0	chr14	57470702	57471192	(49572526)	+	MLT1H2	LTR/ERVL-MaLR	20	482	(7)	1180809
2669	14.8	10.0	0.4	chr14	65158961	65159420	(41884298)	+	MLT2B2	LTR/ERVL	7	515	(0)	1192546
1066	25.0	10.6	5.8	chr14	66178039	66178522	(40865196)	C	MLT1H1	LTR/ERVL-MaLR	(16)	539	30	1194247
1001	18.2	1.6	0.6	chr14	69945496	69945677	(37098041)	+	MLT1H2	LTR/ERVL-MaLR	306	489	(0)	1200435
1402	26.8	7.0	5.8	chr14	69950850	69951384	(37092334)	C	MLT1H1	LTR/ERVL-MaLR	(11)	544	3	1200446
1463	25.5	9.6	4.9	chr14	71748309	71748681	(35295037)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	177	1203263
1862	12.4	0.0	0.4	chr14	71748682	71748930	(35294788)	C	AluSz	SINE/Alu	(64)	248	1	1203264
711	30.6	9.7	5.9	chr14	76126196	76126682	(30917036)	+	MLT1H1	LTR/ERVL-MaLR	31	545	(10)	1211658
2317	11.0	1.0	0.0	chr14	77055659	77055967	(29987751)	+	AluSx1	SINE/Alu	1	312	(0)	1213521
1420	23.3	12.5	1.8	chr14	77055982	77056379	(29987339)	C	MLT1H1	LTR/ERVL-MaLR	(37)	518	72	1213522
2346	19.6	7.2	0.0	chr14	77267763	77268212	(29775506)	+	MLT1H2	LTR/ERVL-MaLR	1	485	(4)	1213917
236	33.8	1.4	13.6	chr14	77268213	77268302	(29775416)	C	L2b	LINE/L2	(123)	3264	3180	1213916
214	27.3	6.4	2.2	chr14	77268270	77268359	(29775359)	C	MIRc	SINE/MIR	(129)	139	46	1213913
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
18766	16.5	2.4	4.8	chr14	81233437	81234145	(25809573)	+	ERVL-B4-int	LTR/ERVL	2732	3441	(2273)	1220324
440	34.6	14.0	2.6	chr14	89303087	89303507	(17740211)	+	L2c	LINE/L2	2910	3386	(1)	1231825
4248	10.8	7.4	3.0	chr14	90760985	90761678	(16282040)	+	LTR8A	LTR/ERV1	1	727	(0)	1234418
2381	6.6	0.3	2.0	chr14	91161069	91161369	(15882349)	C	AluY	SINE/Alu	(15)	296	1	1235199
1242	21.5	9.1	5.2	chr14	91161371	91161776	(15881942)	C	MLT1H2	LTR/ERVL-MaLR	(24)	465	31	1235200
1025	26.4	7.5	4.0	chr14	92192511	92192984	(14850734)	+	MLT1H1	LTR/ERVL-MaLR	1	461	(108)	1237071
323	32.7	6.8	2.4	chr14	92193039	92193248	(14850470)	+	L1ME4a	LINE/L1	5895	6114	(10)	1237072
435	30.0	5.9	0.1	chr14	92566996	92567148	(14476570)	+	MIR3	SINE/MIR	2	160	(48)	1237799
1100	23.8	8.6	5.8	chr14	92567261	92567724	(14475994)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	72	1237800
2178	23.0	5.8	6.8	chr14	92597965	92598524	(14445194)	+	MLT1H1	LTR/ERVL-MaLR	1	554	(1)	1237858
685	29.9	3.1	4.0	chr14	92598525	92598678	(14445040)	C	MIR	SINE/MIR	(108)	154	2	1237857
1188	20.6	6.0	4.8	chr14	92976163	92976245	(14067473)	+	MLT2B4	LTR/ERVL	335	464	(92)	1238586
256	29.8	3.1	1.1	chr14	92976246	92976340	(14067378)	+	MLT1H1	LTR/ERVL-MaLR	29	125	(444)	1238588
281	25.6	2.3	1.1	chr14	92976370	92976531	(14067187)	+	MLT1H1	LTR/ERVL-MaLR	185	437	(52)	1238588
274	32.6	7.2	2.1	chr14	92976621	92976764	(14066954)	C	MIR	SINE/MIR	(0)	262	111	1238589
396	24.5	3.7	12.6	chr14	93852860	93853097	(13190621)	+	MLT1H	LTR/ERVL-MaLR	138	353	(196)	1240139
538	27.4	9.2	2.6	chr14	93853173	93853421	(13190297)	C	MLT1J	LTR/ERVL-MaLR	(115)	329	63	1240138
2789	9.7	2.0	0.3	chr14	93853422	93853804	(13189914)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	1240140
630	26.6	10.3	11.9	chr14	94444816	94445310	(12598408)	+	MLT1G	LTR/ERVL-MaLR	46	594	(1)	1241143
493	31.3	1.6	1.1	chr14	94557471	94557651	(12486067)	+	MLT1F	LTR/ERVL-MaLR	362	543	(5)	1241324
1041	27.4	10.5	6.5	chr14	94735487	94735994	(12307724)	+	MLT1H1	LTR/ERVL-MaLR	25	555	(0)	1241699
193	19.7	8.9	3.2	chr14	94736000	94736062	(12307656)	C	L2b	LINE/L2	(54)	3333	3267	1241696
1049	19.5	0.6	0.0	chr14	94736200	94736373	(12307345)	C	AluJb	SINE/Alu	(18)	294	120	1241700
427	24.4	11.6	7.9	chr14	94853799	94854198	(12189520)	+	MLT1H	LTR/ERVL-MaLR	62	489	(0)	1241978
504	25.0	7.3	1.3	chr14	95828561	95828714	(11215004)	C	MIR	SINE/MIR	(14)	248	85	1243787
522	23.5	13.0	6.6	chr14	95828716	95829052	(11214666)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	130	1243788
191	38.5	5.8	2.3	chr14	96271440	96271572	(10772146)	C	L2	LINE/L2	(515)	2904	2767	1244586
851	15.6	5.3	1.8	chr14	96271576	96271738	(10771980)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	381	1244587
2159	10.7	4.3	0.0	chr14	96271829	96272118	(10771600)	+	AluSg	SINE/Alu	1	303	(7)	1244588
1342	24.9	4.6	4.3	chr14	97017483	97017979	(10025739)	+	MLT1H1	LTR/ERVL-MaLR	1	549	(6)	1245916
320	28.4	4.5	1.6	chr14	97018029	97018157	(10025561)	+	L2c	LINE/L2	3245	3377	(10)	1245915
239	25.8	9.5	6.1	chr14	97461782	97461913	(9581805)	C	MIRb	SINE/MIR	(107)	161	25	1246760
1367	25.0	10.6	0.8	chr14	97461924	97462390	(9581328)	+	MLT1H1	LTR/ERVL-MaLR	4	586	(9)	1246761
630	26.9	8.5	1.4	chr14	99080301	99080732	(7962986)	+	MLT1G3	LTR/ERVL-MaLR	2	576	(3)	1249467
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
425	26.4	7.2	4.9	chr14	101573125	101573327	(5470391)	C	L2a	LINE/L2	(0)	3426	3219	1253337
1028	27.5	7.5	1.2	chr14	101573339	101573869	(5469849)	C	MLT1G3	LTR/ERVL-MaLR	(7)	572	3	1253338
1625	26.6	6.2	5.5	chr14	102793791	102794173	(4249545)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	166	1255705
730	26.5	6.2	5.3	chr14	103217388	103217862	(3825856)	+	MLT1H2	LTR/ERVL-MaLR	75	549	(0)	1256383
664	27.7	5.9	9.3	chr14	103217863	103218304	(3825414)	+	L1MEg	LINE/L1	298	723	(5361)	1256384
4772	20.1	5.0	0.4	chr14	104352094	104352530	(2691188)	C	L1MA9	LINE/L1	(891)	5421	4958	1258338
249	20.0	0.0	3.2	chr14	104352531	104352592	(2691126)	C	MLT1H1-int	LTR/ERVL-MaLR	(1344)	65	6	1258337
620	25.8	8.0	4.1	chr14	104352598	104353071	(2690647)	C	MLT1H1	LTR/ERVL-MaLR	(0)	579	3	1258337
628	25.3	7.6	1.6	chr14	104658369	104658553	(2385165)	+	MLT1G1	LTR/ERVL-MaLR	374	570	(9)	1258664
225	30.4	0.0	0.0	chr14	104999357	104999412	(2044306)	+	MLT1H1	LTR/ERVL-MaLR	207	262	(293)	1259072
661	25.1	9.1	0.3	chr14	104999690	104999981	(2043737)	+	L1MEf	LINE/L1	3660	3979	(2962)	1259065
320	30.3	2.7	7.2	chr14	105117820	105117972	(1925746)	+	MLT1H	LTR/ERVL-MaLR	1	146	(409)	1259286
671	22.4	8.7	0.1	chr14	105118100	105118297	(1925421)	+	MLT1H	LTR/ERVL-MaLR	335	559	(1)	1259286
1315	21.2	8.6	7.9	chr15	31211187	31211627	(70779562)	+	MLT1H2	LTR/ERVL-MaLR	3	446	(43)	1278283
627	22.2	2.8	5.8	chr15	31211645	31211869	(70779320)	+	L1MC5	LINE/L1	9082	9299	(5)	1278279
1738	27.2	6.6	1.9	chr15	60885056	60885575	(41105614)	+	MLT1H1	LTR/ERVL-MaLR	1	546	(9)	1324479
758	24.5	18.4	8.3	chr15	64900985	64901411	(37089778)	+	MLT1H1	LTR/ERVL-MaLR	1	487	(68)	1331466
2144	9.5	0.0	0.3	chr15	64901412	64901705	(37089484)	C	AluSc5	SINE/Alu	(16)	293	1	1331467
1064	20.6	0.0	0.0	chr15	66275135	66275304	(35715885)	+	FAM	SINE/Alu	1	170	(15)	1334332
322	8.0	0.0	0.0	chr15	66275306	66275355	(35715834)	+	L1MB2	LINE/L1	6115	6164	(7)	1334328
693	17.3	0.0	0.8	chr15	66275416	66275543	(35715646)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	363	1334333
1396	26.4	9.0	5.2	chr15	68356549	68357104	(33634085)	+	MLT1G1	LTR/ERVL-MaLR	1	579	(0)	1338190
189	33.7	8.2	10.6	chr15	69067957	69068231	(32922958)	+	L2c	LINE/L2	3110	3377	(10)	1339557
607	27.5	5.7	10.2	chr15	69068235	69068808	(32922381)	C	MLT1H1	LTR/ERVL-MaLR	(2)	553	4	1339558
378	22.8	18.1	1.4	chr15	85104956	85105102	(16886087)	C	L2a	LINE/L2	(118)	3308	3132	1367259
181	33.7	1.1	1.1	chr15	85105416	85105508	(16885681)	+	MIRb	SINE/MIR	93	185	(83)	1367260
20	10.6	7.3	5.5	chr15	99798192	99798259	(2192930)	+	(GAGCAGA)n	Simple_repeat	1	73	(0)	1390631
312	27.6	9.8	3.1	chr16	882296	882618	(89455727)	+	MLT1H	LTR/ERVL-MaLR	108	417	(72)	1395308
273	28.6	12.5	0.0	chr16	883362	883466	(89454879)	+	MLT1H	LTR/ERVL-MaLR	370	489	(0)	1395308
184	31.0	2.7	0.0	chr16	2861160	2861230	(87477115)	C	MamTip2	DNA/hAT-Tip100	(158)	147	75	1398043
182	32.5	5.7	3.5	chr16	2861233	2861318	(87477027)	C	L2c	LINE/L2	(0)	3387	3300	1398044
353	27.6	1.1	0.0	chr16	2861321	2861407	(87476938)	C	L2a	LINE/L2	(1)	3425	3338	1398045
3295	14.5	1.4	5.9	chr16	2861444	2861816	(87476529)	+	L1PB4	LINE/L1	5552	5913	(243)	1398046
456	27.0	8.1	2.0	chr16	5938492	5938642	(84399703)	+	MLT1H	LTR/ERVL-MaLR	14	174	(375)	1404302
825	17.5	1.4	0.7	chr16	5938763	5938906	(84399439)	+	MLT1H	LTR/ERVL-MaLR	377	521	(28)	1404303
749	26.1	9.8	7.5	chr16	8596356	8596905	(81741440)	+	MLT1G1	LTR/ERVL-MaLR	16	579	(0)	1409373
273	33.1	4.0	0.8	chr16	8596929	8597050	(81741295)	+	L2a	LINE/L2	2740	2865	(554)	1409372
1837	20.6	9.5	1.8	chr16	10562414	10562700	(79775645)	+	MLT1H	LTR/ERVL-MaLR	236	548	(1)	1413717
232	32.6	12.0	0.0	chr16	10562710	10562804	(79775541)	+	L2c	LINE/L2	3273	3380	(7)	1413719
585	21.1	0.0	0.0	chr16	12394336	12394439	(77943906)	+	MIR	SINE/MIR	2	105	(157)	1417845
580	21.1	8.1	3.9	chr16	12394445	12394702	(77943643)	C	MLT1H2	LTR/ERVL-MaLR	(6)	549	257	1417846
378	26.9	14.7	5.7	chr16	16083785	16083993	(74254352)	C	MLT1H	LTR/ERVL-MaLR	(285)	264	34	1426048
193	39.0	11.1	1.7	chr16	17034271	17034442	(73303903)	C	L2b	LINE/L2	(255)	3120	2931	1428190
666	26.2	4.5	7.2	chr16	17034563	17035022	(73303323)	C	MLT1H1	LTR/ERVL-MaLR	(8)	547	80	1428191
1101	28.3	9.9	6.5	chr16	17421288	17421839	(72916506)	+	MLT1G1	LTR/ERVL-MaLR	2	574	(5)	1429054
830	25.8	8.5	5.0	chr16	18591519	18591899	(71746446)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	75	1431451
853	28.2	9.8	6.1	chr16	20039806	20040327	(70298018)	+	MLT1F	LTR/ERVL-MaLR	1	543	(5)	1434980
1656	25.0	4.8	4.3	chr16	21064010	21064513	(69273832)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	1437063
1246	27.8	7.1	5.8	chr16	23709373	23709903	(66628442)	+	MLT1H	LTR/ERVL-MaLR	12	549	(0)	1442908
1370	24.2	8.6	3.9	chr16	23854313	23854790	(66483555)	C	MLT1H	LTR/ERVL-MaLR	(3)	546	1	1443291
366	28.8	10.9	0.6	chr16	23894349	23894505	(66443840)	C	L1ME4a	LINE/L1	(475)	5649	5475	1443397
470	24.8	11.9	0.7	chr16	23894557	23894698	(66443647)	+	MLT1H2	LTR/ERVL-MaLR	284	443	(46)	1443399
249	27.6	11.7	8.4	chr16	23894789	23895416	(66442929)	C	L1MD	LINE/L1	(2374)	3772	3122	1443400
240	25.4	0.0	1.7	chr16	25163781	25163840	(65174505)	C	L1ME3G	LINE/L1	(2219)	558	500	1446344
246	17.2	1.7	3.3	chr16	25163856	25163915	(65174430)	C	MLT1H	LTR/ERVL-MaLR	(91)	458	400	1446345
903	26.9	10.7	4.4	chr16	25163928	25164355	(65173990)	C	MLT1H	LTR/ERVL-MaLR	(91)	458	1	1446346
1546	23.6	11.7	3.0	chr16	29136109	29136605	(61201740)	+	MLT1F	LTR/ERVL-MaLR	3	548	(0)	1455250
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
377	20.6	0.0	0.0	chr16	34063794	34063861	(56274484)	+	AluYj4	SINE/Alu	224	291	(20)	1463563
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
1675	25.4	7.5	3.3	chr16	48145433	48145945	(42192400)	+	MLT1H	LTR/ERVL-MaLR	12	547	(2)	1468194
678	21.1	5.6	0.0	chr16	48145947	48146098	(42192247)	+	MIR	SINE/MIR	88	248	(14)	1468195
408	25.6	14.6	0.8	chr16	51009655	51009784	(39328561)	+	MIR	SINE/MIR	112	262	(0)	1473586
702	26.4	4.7	7.4	chr16	51009899	51010115	(39328230)	C	MLT1H2	LTR/ERVL-MaLR	(0)	548	302	1473587
1536	21.5	13.5	3.6	chr16	51298637	51299129	(39039216)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	1474104
728	29.9	13.9	2.3	chr16	51299164	51299512	(39038833)	C	MLT1I	LTR/ERVL-MaLR	(12)	399	4	1474105
3027	22.3	1.4	6.7	chr16	53428870	53429599	(36908746)	+	LTR8	LTR/ERV1	1	691	(0)	1477832
402	24.4	2.6	8.8	chr16	53429712	53429877	(36908468)	C	MLT1G1	LTR/ERVL-MaLR	(64)	515	308	1477833
356	14.1	3.0	1.5	chr16	53429888	53429952	(36908393)	+	MER67B	LTR/ERV1	1	66	(595)	1477834
225	30.5	7.9	2.8	chr16	55225912	55226019	(35112326)	C	LTR88c	LTR/Gypsy?	(545)	292	179	1481016
1012	25.1	14.3	3.8	chr16	55226026	55226505	(35111840)	C	MLT1H1	LTR/ERVL-MaLR	(5)	550	12	1481017
679	24.6	4.2	0.6	chr16	56837801	56838006	(33500339)	C	L1ME3Cz	LINE/L1	(646)	351	168	1483804
904	26.1	10.5	5.1	chr16	58217313	58217842	(32120503)	+	MLT1G1	LTR/ERVL-MaLR	1	563	(6)	1486657
2214	11.5	0.0	0.3	chr16	58217952	58218246	(32120099)	+	AluSq2	SINE/Alu	1	294	(19)	1486658
627	23.0	3.1	13.5	chr16	58768277	58768566	(31569779)	C	MLT1H2	LTR/ERVL-MaLR	(58)	491	192	1487816
1847	17.2	0.3	0.0	chr16	58768567	58768869	(31569476)	C	AluJr	SINE/Alu	(8)	304	1	1487817
16	9.3	0.0	0.0	chr16	66171675	66171697	(24166648)	+	(T)n	Simple_repeat	1	23	(0)	1499221
16	9.6	0.0	0.0	chr16	66171877	66171899	(24166446)	+	(TG)n	Simple_repeat	1	23	(0)	1499222
1718	18.1	0.7	2.3	chr16	68622563	68622861	(21715484)	+	AluJo	SINE/Alu	1	294	(18)	1503914
68	0.0	0.0	0.0	chr16	68622876	68622933	(21715412)	+	(CA)n	Simple_repeat	1	58	(0)	1503915
783	21.6	4.0	2.1	chr16	68622950	68623196	(21715149)	+	MLT1H	LTR/ERVL-MaLR	273	549	(0)	1503912
262	19.6	4.9	5.8	chr16	68623181	68623219	(21715126)	+	Arthur1	DNA/hAT-Tip100	652	689	(3258)	1503916
2056	13.0	1.0	2.2	chr16	68623220	68623535	(21714810)	C	AluSx1	SINE/Alu	(0)	312	1	1503917
798	27.2	8.4	6.8	chr16	73123196	73123654	(17214691)	+	MLT1H	LTR/ERVL-MaLR	1	514	(35)	1512469
2061	19.4	1.4	0.0	chr16	73123672	73124031	(17214314)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1512470
2151	8.0	5.9	0.4	chr16	73820099	73820372	(16517973)	C	AluY	SINE/Alu	(21)	290	1	1513591
1064	27.7	9.0	9.1	chr16	73820373	73820760	(16517585)	+	MLT1G1	LTR/ERVL-MaLR	201	579	(0)	1513590
1366	25.7	3.2	6.4	chr16	74203213	74203596	(16134749)	+	MLT1H	LTR/ERVL-MaLR	14	434	(115)	1514184
2408	11.0	0.0	0.0	chr16	74203597	74203906	(16134439)	+	AluSx	SINE/Alu	1	310	(2)	1514185
1366	25.4	3.2	6.7	chr16	74203907	74204031	(16134314)	+	MLT1H	LTR/ERVL-MaLR	435	549	(0)	1514184
1609	22.6	4.7	5.8	chr16	74291647	74292115	(16046230)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	26	1514358
855	27.4	12.3	6.2	chr16	75038096	75038626	(15299719)	C	MLT1G1	LTR/ERVL-MaLR	(7)	572	1	1515992
2073	22.7	6.3	3.0	chr16	78272054	78272589	(12065756)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	1	1521444
324	32.1	10.5	6.2	chr16	79370619	79370917	(10967428)	+	L2b	LINE/L2	2559	2863	(556)	1523418
1949	24.7	5.9	1.9	chr16	79370918	79371449	(10966896)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	1	1523419
2091	26.3	8.5	0.6	chr16	80096885	80097415	(10240930)	+	MLT1G1	LTR/ERVL-MaLR	1	577	(2)	1524724
470	21.9	11.1	5.9	chr16	80097416	80097480	(10240865)	+	L2	LINE/L2	2903	2960	(459)	1524723
795	28.9	5.3	8.5	chr16	80226289	80226820	(10111525)	+	MLT1H	LTR/ERVL-MaLR	36	549	(0)	1524931
2048	29.4	8.8	1.6	chr16	80226821	80227730	(10110615)	+	MLT1H-int	LTR/ERVL-MaLR	1	981	(428)	1524931
580	25.4	8.5	5.6	chr16	81231167	81231651	(9106694)	+	MLT1H2	LTR/ERVL-MaLR	4	542	(7)	1526827
431	29.0	2.8	3.0	chr16	81399670	81399944	(8938401)	C	MER102a	DNA/hAT-Charlie	(2019)	409	141	1527164
650	16.8	8.9	2.0	chr16	81400032	81400214	(8938131)	+	MLT1H	LTR/ERVL-MaLR	366	569	(0)	1527165
381	22.6	7.8	13.7	chr16	81400216	81400420	(8937925)	+	L2a	LINE/L2	3235	3426	(0)	1527163
1732	23.8	9.6	6.3	chr16	84254914	84255469	(6082876)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	16	1532441
189	25.0	2.6	11.6	chr16	86160803	86160888	(4177457)	C	MIR3	SINE/MIR	(94)	174	91	1536156
415	21.2	3.9	2.9	chr16	86161140	86161241	(4177104)	+	MIRb	SINE/MIR	117	219	(49)	1536157
279	33.1	9.1	0.6	chr16	86355777	86355958	(3982387)	+	L1ME4a	LINE/L1	5898	6096	(28)	1536500
900	29.3	4.9	5.7	chr16	86356010	86356360	(3981985)	C	MLT1H	LTR/ERVL-MaLR	(192)	357	10	1536501
2254	19.6	4.1	1.5	chr16	86446941	86447395	(3890950)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	1536683
1059	28.7	8.7	5.2	chr16	86447396	86447890	(3890455)	C	MLT1G3	LTR/ERVL-MaLR	(71)	524	1	1536682
657	34.1	0.4	0.8	chr16	86460827	86461077	(3877268)	+	MIR	SINE/MIR	8	257	(5)	1536710
780	24.5	12.3	1.6	chr16	86461147	86461598	(3876747)	C	MLT1G1	LTR/ERVL-MaLR	(34)	561	3	1536711
638	26.6	8.6	4.5	chr16	86489395	86489812	(3848533)	+	MLT1H2	LTR/ERVL-MaLR	124	579	(0)	1536758
206	34.9	7.2	0.0	chr16	86647543	86647671	(3690674)	+	L3	LINE/CR1	3816	3954	(145)	1537004
574	26.9	11.4	2.6	chr16	86647705	86648115	(3690230)	C	MLT1G1	LTR/ERVL-MaLR	(56)	539	89	1537005
264	28.2	10.7	3.6	chr16	86921333	86921521	(3416824)	+	MIRc	SINE/MIR	29	230	(38)	1537472
856	29.1	15.7	0.8	chr16	86974019	86974402	(3363943)	+	MLT1H1	LTR/ERVL-MaLR	13	464	(91)	1537572
1093	23.5	6.1	0.0	chr16	86974556	86974832	(3363513)	+	MER58B	DNA/hAT-Charlie	47	341	(0)	1537573
1632	26.1	5.5	1.7	chr16	87190078	87190553	(3147792)	+	MLT1H1	LTR/ERVL-MaLR	1	495	(60)	1537976
1213	25.5	7.4	15.8	chr16	87190609	87191427	(3146918)	+	MER20B	DNA/hAT-Charlie	7	753	(30)	1537977
455	31.0	5.4	1.4	chr16	87532887	87533072	(2805273)	+	MIRb	SINE/MIR	5	201	(67)	1538603
618	27.6	6.1	8.1	chr16	87533234	87533553	(2804792)	C	MLT1H	LTR/ERVL-MaLR	(93)	456	144	1538604
2840	21.0	11.2	8.5	chr16	87533555	87533863	(2804482)	C	MER21C	LTR/ERVL	(4)	934	639	1538605
608	29.2	8.9	6.7	chr16	87803246	87803675	(2534670)	+	MLT1H1	LTR/ERVL-MaLR	110	549	(6)	1539105
1594	24.7	11.2	2.2	chr16	88096476	88096971	(2241374)	+	MLT1F	LTR/ERVL-MaLR	3	548	(0)	1539533
247	27.4	2.1	6.9	chr16	88096984	88097085	(2241260)	C	CR1_Mam	LINE/CR1	(294)	1910	1814	1539536
1003	28.7	5.2	2.0	chr16	88286990	88287563	(2050782)	C	L1ME3F	LINE/L1	(212)	6031	5436	1539772
371	31.4	0.4	0.0	chr16	89913906	89915002	(423343)	+	(TG)n	Simple_repeat	1	1101	(0)	1542074
1169	24.2	11.1	0.6	chr17	1413278	1413630	(81843811)	+	MLT1H	LTR/ERVL-MaLR	153	547	(2)	1547066
1945	15.2	0.0	0.0	chr17	1413638	1413798	(81843643)	C	AluSx	SINE/Alu	(18)	294	134	1547068
2596	19.3	3.8	4.4	chr17	1969357	1969745	(81287696)	+	MER89	LTR/ERV1	158	559	(0)	1548191
330	22.0	7.2	18.8	chr17	1969746	1969934	(81287507)	C	MLT1H	LTR/ERVL-MaLR	(19)	470	303	1548190
2291	11.9	0.7	0.3	chr17	1970010	1970319	(81287122)	C	AluSx	SINE/Alu	(0)	312	2	1548193
1024	23.0	14.5	4.4	chr17	3759734	3760146	(79497295)	+	MLT1H2	LTR/ERVL-MaLR	23	484	(5)	1551657
2282	12.1	0.3	0.0	chr17	5605241	5605546	(77651895)	C	AluSx1	SINE/Alu	(5)	307	1	1555449
600	25.2	9.5	5.2	chr17	5605547	5605941	(77651500)	C	MLT1H	LTR/ERVL-MaLR	(4)	545	46	1555450
1961	16.0	0.3	2.2	chr17	5605942	5606254	(77651187)	+	AluJb	SINE/Alu	1	307	(5)	1555451
2022	23.4	9.2	0.8	chr17	5955534	5956063	(77301378)	+	MLT1G1	LTR/ERVL-MaLR	1	579	(0)	1556127
450	24.8	2.4	4.7	chr17	5956064	5956166	(77301275)	C	MIRc	SINE/MIR	(154)	114	12	1556126
197	29.5	1.3	8.2	chr17	5956140	5956224	(77301217)	+	L2b	LINE/L2	3282	3360	(15)	1556128
2073	23.1	9.1	0.8	chr17	5973484	5973989	(77283452)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	4	1556158
1123	25.5	5.3	6.7	chr17	7117424	7117898	(76139543)	+	MLT1H	LTR/ERVL-MaLR	82	549	(0)	1558261
1392	29.2	5.5	9.7	chr17	7117916	7118272	(76139169)	C	L1ME5	LINE/L1	(212)	5982	5653	1558260
382	28.4	10.2	5.6	chr17	8586950	8587340	(74670101)	+	MLT1H2	LTR/ERVL-MaLR	73	483	(6)	1561039
1309	32.8	10.4	3.4	chr17	8587405	8588699	(74668742)	+	L2b	LINE/L2	1433	2828	(591)	1561040
1684	25.1	9.4	2.5	chr17	8656506	8656955	(74600486)	+	MLT1H1	LTR/ERVL-MaLR	1	498	(57)	1561180
1876	14.9	1.3	0.3	chr17	8656956	8657251	(74600190)	+	AluJr4	SINE/Alu	1	299	(13)	1561181
694	26.9	10.6	8.0	chr17	10193422	10193946	(73063495)	+	MLT1F	LTR/ERVL-MaLR	1	540	(8)	1564236
18	12.2	0.0	0.0	chr17	11869690	11869716	(71387725)	+	(AC)n	Simple_repeat	1	27	(0)	1567164
1664	27.8	7.5	1.9	chr17	11869769	11870286	(71387155)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	7	1567165
988	28.9	12.9	3.0	chr17	13538860	13539297	(69718144)	C	MLT1H1	LTR/ERVL-MaLR	(7)	548	61	1569936
742	27.5	9.1	6.4	chr17	14010513	14010972	(69246469)	C	MLT1H2	LTR/ERVL-MaLR	(38)	451	12	1570749
799	24.5	13.1	14.0	chr17	14354639	14355132	(68902309)	+	MLT1H2	LTR/ERVL-MaLR	1	489	(0)	1571282
273	30.9	4.0	10.7	chr17	14355133	14355366	(68902075)	+	L2c	LINE/L2	3165	3386	(1)	1571281
1046	24.4	13.1	5.4	chr17	19338505	19338951	(63918490)	+	MLT1H2	LTR/ERVL-MaLR	3	489	(0)	1580424
1513	29.3	10.0	2.5	chr17	19338952	19339547	(63917894)	C	MLT1J2-int	LTR/ERVL-MaLR	(728)	659	14	1580423
303	23.9	4.0	12.3	chr17	20993908	20994126	(62263315)	C	MLT1H2	LTR/ERVL-MaLR	(38)	451	252	1583452
771	27.4	16.1	0.7	chr17	21308912	21309326	(61948115)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	65	1584048
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
2223	13.8	0.0	0.0	chr17	28927829	28928124	(54329317)	+	AluSz	SINE/Alu	1	296	(16)	1589619
1179	25.6	11.6	5.6	chr17	28928125	28928367	(54329074)	+	MLT1H1	LTR/ERVL-MaLR	293	552	(3)	1589618
1666	12.1	2.6	0.0	chr17	28928555	28928777	(54328664)	+	AluSq2	SINE/Alu	56	284	(29)	1589620
333	25.7	0.0	9.0	chr17	29583179	29583289	(53674152)	C	MIR3	SINE/MIR	(47)	161	61	1590963
182	34.9	16.8	1.3	chr17	29583670	29583820	(53673621)	C	MIRb	SINE/MIR	(21)	247	69	1590964
227	29.7	1.5	0.0	chr17	32142119	32142182	(51115259)	C	L2b	LINE/L2	(62)	3313	3249	1596166
222	26.1	16.2	9.3	chr17	32142187	32142283	(51115158)	+	MIR3	SINE/MIR	60	164	(44)	1596167
56	0.0	0.0	0.0	chr17	32142452	32142501	(51114940)	+	(CCG)n	Simple_repeat	1	50	(0)	1596168
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
849	32.0	11.1	2.1	chr17	34045835	34046307	(49211134)	+	MLT1H1	LTR/ERVL-MaLR	35	555	(0)	1599785
2028	10.3	0.0	5.8	chr17	35222146	35222455	(48034986)	+	AluSq2	SINE/Alu	1	292	(21)	1601946
1061	26.4	10.5	5.9	chr17	35222456	35222751	(48034690)	+	MLT1H1	LTR/ERVL-MaLR	236	542	(13)	1601945
385	22.9	0.3	0.2	chr17	35222762	35222848	(48034593)	+	MLT1H1-int	LTR/ERVL-MaLR	2	89	(1400)	1601945
262	32.4	0.0	0.0	chr17	35222849	35222916	(48034525)	C	MIRb	SINE/MIR	(154)	114	47	1601947
471	30.3	11.7	1.4	chr17	41550015	41550235	(41707206)	+	MIRb	SINE/MIR	22	268	(0)	1613796
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
18	31.7	0.0	6.7	chr17	44213905	44214023	(39043418)	+	(CCCT)n	Simple_repeat	1	119	(0)	1619452
191	31.5	6.6	5.2	chr17	44214145	44214278	(39043163)	C	MIR3	SINE/MIR	(15)	193	58	1619453
378	30.8	9.1	3.4	chr17	44214314	44214488	(39042953)	C	MIR3	SINE/MIR	(17)	191	6	1619454
20	16.4	0.0	0.0	chr17	48960663	48960696	(34296745)	+	(T)n	Simple_repeat	1	34	(0)	1628926
876	12.2	0.8	0.8	chr17	50822521	50822651	(32434790)	C	FLAM_C	SINE/Alu	(12)	131	1	1632537
859	27.8	9.4	14.8	chr17	50822656	50823229	(32434212)	C	MLT1H1	LTR/ERVL-MaLR	(13)	542	3	1632538
2099	10.3	1.0	1.4	chr17	56744530	56744820	(26512621)	+	AluSx	SINE/Alu	2	291	(21)	1641878
2591	23.0	1.6	2.3	chr17	56744821	56745306	(26512135)	C	MLT1H1	LTR/ERVL-MaLR	(62)	493	3	1641877
1059	27.1	2.5	3.7	chr17	57817339	57817660	(25439781)	+	ERV3-16A3_I-int	LTR/ERVL	2768	3085	(2141)	1643898
335	32.5	5.6	6.6	chr17	59619923	59620103	(23637338)	+	L1MDb	LINE/L1	582	760	(5649)	1647644
2530	19.8	4.3	4.1	chr17	60566377	60566912	(22690529)	+	MLT1F	LTR/ERVL-MaLR	10	546	(2)	1649543
685	28.4	12.5	6.4	chr17	65738858	65739312	(17518129)	+	MLT1H	LTR/ERVL-MaLR	1	515	(34)	1659205
1570	25.2	4.2	3.1	chr17	68589022	68589442	(14667999)	+	MLT1H	LTR/ERVL-MaLR	117	542	(7)	1664458
842	17.9	8.6	11.8	chr17	73066141	73066419	(10191022)	+	MLT1H2	LTR/ERVL-MaLR	194	462	(27)	1671553
412	32.0	4.6	5.0	chr17	73066433	73066652	(10190789)	+	MLT1K	LTR/ERVL-MaLR	9	227	(368)	1671554
562	25.0	0.7	2.0	chr17	73453033	73453179	(9804262)	+	MLT1H	LTR/ERVL-MaLR	26	170	(379)	1672348
619	24.3	2.7	4.2	chr17	73453208	73453370	(9804071)	+	MLT1H	LTR/ERVL-MaLR	348	510	(39)	1672348
2217	13.1	0.3	0.3	chr17	73453371	73453676	(9803765)	C	AluSx	SINE/Alu	(6)	306	1	1672349
852	25.3	16.6	2.9	chr17	73682027	73682358	(9575083)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	156	1672771
1991	13.3	0.4	0.0	chr17	75056936	75057251	(8200190)	C	AluSx	SINE/Alu	(0)	312	3	1675256
489	28.7	7.7	7.0	chr17	77875947	77876308	(5381133)	+	MLT1G3	LTR/ERVL-MaLR	149	533	(46)	1680800
2151	23.6	9.9	0.4	chr17	78950664	78951185	(4306256)	+	MLT1G1	LTR/ERVL-MaLR	1	577	(2)	1682746
880	18.2	3.4	0.0	chr17	78951218	78951360	(4306081)	C	AluJo	SINE/Alu	(18)	294	147	1682747
293	28.5	12.2	0.8	chr17	80829391	80829521	(2427920)	C	Charlie8	DNA/hAT-Charlie	(2256)	172	25	1685583
1203	7.5	0.0	0.0	chr17	81711642	81711827	(1545614)	C	AluSx	SINE/Alu	(0)	312	136	1686674
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
202	25.9	11.5	0.0	chr18	2895315	2895399	(77477886)	C	L2c	LINE/L2	(224)	3163	3068	1693445
825	25.4	5.5	7.3	chr18	2895401	2895805	(77477480)	C	MLT1H2	LTR/ERVL-MaLR	(0)	549	139	1693446
15	9.6	2.6	5.1	chr18	3389942	3389992	(76983293)	+	A-rich	Low_complexity	1	49	(0)	1694296
480	25.0	12.6	3.9	chr18	3390061	3390396	(76982889)	C	MLT1H2	LTR/ERVL-MaLR	(0)	595	197	1694297
270	28.2	11.0	1.5	chr18	3390416	3390613	(76982672)	C	HAL1ME	LINE/L1	(2138)	327	109	1694295
246	28.9	4.0	0.0	chr18	6446052	6446148	(73927137)	C	MamGypLTR1d	LTR/Gypsy	(612)	201	101	1698562
785	26.8	6.5	11.3	chr18	8896017	8896518	(71476767)	+	MLT1H2	LTR/ERVL-MaLR	14	489	(0)	1702068
2008	22.1	14.1	5.6	chr18	22008663	22009256	(58364029)	+	MLT2F	LTR/ERVL	3	655	(8)	1713730
1109	27.1	8.0	7.0	chr18	22009332	22009815	(58363470)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	1	1713731
2505	7.3	0.3	0.0	chr18	23706797	23707098	(56666187)	+	AluSp	SINE/Alu	1	303	(10)	1716731
1065	24.0	7.2	6.0	chr18	23707099	23707517	(56665768)	C	MLT1H2	LTR/ERVL-MaLR	(69)	486	32	1716730
296	30.0	11.1	7.7	chr18	26843666	26843829	(53529456)	C	MLT1L	LTR/ERVL-MaLR	(104)	506	315	1721594
1335	24.8	5.3	7.8	chr18	26843844	26844404	(53528881)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	4	1721597
625	26.0	0.6	1.3	chr18	30874647	30874802	(49498483)	C	MLT1H1	LTR/ERVL-MaLR	(13)	542	388	1726899
2123	12.1	1.3	0.0	chr18	30874848	30875153	(49498132)	+	LTR43B	LTR/ERV1	1	310	(262)	1726900
693	32.5	5.6	3.4	chr18	35239269	35239653	(45133632)	+	MLT1H	LTR/ERVL-MaLR	154	547	(2)	1733037
2213	11.2	0.0	2.3	chr18	37359847	37360151	(43013134)	C	AluSx	SINE/Alu	(13)	299	2	1735943
454	25.8	15.2	3.5	chr18	37360469	37360665	(43012620)	C	MIR	SINE/MIR	(19)	243	20	1735944
712	26.4	6.8	8.5	chr18	37590246	37590684	(42782601)	+	MLT1H	LTR/ERVL-MaLR	97	545	(4)	1736258
451	33.7	3.6	3.6	chr18	39893407	39893600	(40479685)	+	MLT1H	LTR/ERVL-MaLR	93	286	(263)	1739312
638	23.9	1.3	2.3	chr18	39893645	39893819	(40479466)	+	MLT1H	LTR/ERVL-MaLR	377	591	(0)	1739312
1231	23.6	11.0	4.8	chr18	50588094	50588551	(29784734)	C	MLT1H1	LTR/ERVL-MaLR	(14)	541	52	1755383
756	27.1	7.9	7.1	chr18	53709980	53710415	(26662870)	+	MLT1H2	LTR/ERVL-MaLR	76	489	(0)	1760196
3911	22.9	5.7	2.6	chr18	55200996	55202268	(25171017)	+	Charlie2a	DNA/hAT-Charlie	1478	2799	(62)	1762380
954	25.1	13.0	5.4	chr18	55202269	55202769	(25170516)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	5	1762381
976	31.2	4.8	5.6	chr18	55517080	55517564	(24855721)	+	MLT1H2	LTR/ERVL-MaLR	1	481	(8)	1762776
185	32.3	5.8	4.4	chr18	55517573	55517708	(24855577)	C	L2a	LINE/L2	(793)	2626	2489	1762775
801	30.4	7.0	2.7	chr18	56203924	56204362	(24168923)	+	MLT1G1	LTR/ERVL-MaLR	119	577	(2)	1763755
1408	23.8	5.0	0.3	chr18	59630405	59630729	(20742556)	C	MLT1H1	LTR/ERVL-MaLR	(26)	529	189	1769233
1798	24.6	6.6	3.6	chr18	70338978	70339505	(10033780)	C	MLT1H1	LTR/ERVL-MaLR	(10)	545	1	1784430
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
1992	11.9	1.4	1.0	chr19	1542370	1542662	(57074954)	C	AluSq2	SINE/Alu	(19)	294	1	1798976
288	31.8	1.6	0.8	chr19	1542670	1542796	(57074820)	C	MamRep1527	LTR	(486)	483	356	1798977
184	20.0	0.0	4.3	chr19	1542901	1542947	(57074669)	C	MIRc	SINE/MIR	(103)	165	121	1798978
2525	7.8	0.0	0.0	chr19	1932151	1932457	(56685159)	C	AluY	SINE/Alu	(4)	307	1	1799786
12	19.5	7.1	3.3	chr19	1932541	1932596	(56685020)	+	(GGCAG)n	Simple_repeat	1	60	(0)	1799787
362	30.1	3.1	4.6	chr19	1932963	1933014	(56684602)	C	MLT1H1	LTR/ERVL-MaLR	(286)	263	219	1799788
2389	8.6	1.0	0.3	chr19	2023896	2024199	(56593417)	+	AluY	SINE/Alu	1	306	(5)	1799977
1849	12.2	0.7	5.2	chr19	2024200	2024380	(56593236)	+	AluSz	SINE/Alu	137	311	(1)	1799976
405	15.3	2.2	0.0	chr19	2024472	2024554	(56593062)	+	MLT1H1	LTR/ERVL-MaLR	412	501	(54)	1799973
1095	18.7	0.5	0.0	chr19	2024555	2024763	(56592853)	+	LTR26D	LTR/ERV1	1	210	(394)	1799978
2246	9.2	0.7	0.7	chr19	2024765	2025056	(56592560)	+	AluSc8	SINE/Alu	1	292	(19)	1799979
1175	21.6	12.6	7.2	chr19	3273132	3273601	(55344015)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	51	1802805
227	22.2	0.0	0.0	chr19	3673982	3674026	(54943590)	+	MLT1H	LTR/ERVL-MaLR	136	180	(369)	1803746
440	23.5	10.5	1.9	chr19	3674185	3674340	(54943276)	+	MLT1H	LTR/ERVL-MaLR	379	549	(0)	1803746
538	9.6	0.0	2.7	chr19	3674341	3674413	(54943203)	C	AluSx3	SINE/Alu	(75)	236	166	1803747
501	8.1	0.0	0.0	chr19	3674416	3674477	(54943139)	C	AluSx3	SINE/Alu	(75)	236	175	1803748
288	34.0	0.0	0.0	chr19	3684354	3684459	(54933157)	+	MLT1H1	LTR/ERVL-MaLR	39	144	(411)	1803774
233	28.2	0.0	5.5	chr19	3684588	3684696	(54932920)	+	MLT1H1	LTR/ERVL-MaLR	368	470	(19)	1803774
1059	27.1	6.1	3.8	chr19	5983563	5984054	(52633562)	+	MLT1G	LTR/ERVL-MaLR	1	569	(0)	1809219
324	26.8	9.9	1.1	chr19	5984088	5984223	(52633393)	C	L2a	LINE/L2	(77)	3349	3189	1809220
763	24.2	4.1	11.8	chr19	7125924	7126345	(51491271)	+	MLT1H	LTR/ERVL-MaLR	74	461	(88)	1812055
1074	30.9	7.5	2.8	chr19	8642389	8642854	(49974762)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	60	1815803
227	27.3	4.9	8.3	chr19	9584766	9584849	(49032767)	C	SVA_F	Retroposon/SVA	(910)	465	385	1817699
620	19.5	0.4	0.1	chr19	9584795	9584916	(49032700)	+	FLAM_C	SINE/Alu	5	129	(173)	1817700
798	29.3	7.3	2.6	chr19	11067322	11067757	(47549859)	+	MLT1G	LTR/ERVL-MaLR	43	549	(0)	1821337
620	26.2	7.1	7.0	chr19	13629953	13630341	(44987275)	+	MLT1H	LTR/ERVL-MaLR	6	538	(17)	1827321
1136	18.1	4.2	0.0	chr19	13630342	13630546	(44987070)	+	MLT2B2	LTR/ERVL	1	214	(301)	1827322
1920	17.6	0.7	0.0	chr19	13704721	13705016	(44912600)	+	AluJo	SINE/Alu	2	299	(13)	1827547
17	19.3	2.0	1.9	chr19	13705017	13705039	(44912577)	+	GA-rich	Low_complexity	14	36	(0)	1827548
31	0.0	0.0	0.0	chr19	13705040	13705068	(44912548)	+	(AGGG)n	Simple_repeat	1	29	(0)	1827549
16	13.3	3.5	6.7	chr19	13705069	13705086	(44912530)	+	GA-rich	Low_complexity	39	55	(0)	1827550
424	21.9	1.2	0.0	chr19	13705280	13705361	(44912255)	+	LTR16C	LTR/ERVL	162	244	(245)	1827551
728	19.6	3.4	0.7	chr19	13705367	13705510	(44912106)	+	MLT1H2	LTR/ERVL-MaLR	340	487	(2)	1827552
32	30.7	1.9	9.1	chr19	14564295	14564670	(44052946)	+	(CCCGC)n	Simple_repeat	1	383	(0)	1829809
699	23.5	0.6	1.2	chr19	14669911	14670078	(43947538)	+	L1PA17	LINE/L1	5988	6154	(12)	1830113
554	28.8	8.7	5.3	chr19	14670084	14670535	(43947081)	C	MLT1G	LTR/ERVL-MaLR	(65)	484	14	1830109
2207	15.0	4.7	4.7	chr19	15143899	15144325	(43473291)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	1831215
1086	34.7	1.8	4.2	chr19	15144326	15144357	(43473259)	+	L1M3b	LINE/L1	1700	1725	(5771)	1831214
1348	29.8	2.1	5.0	chr19	15144475	15145053	(43472563)	+	L1M3b	LINE/L1	2142	2703	(4793)	1831214
2381	8.1	0.3	0.0	chr19	15558399	15558694	(43058922)	+	AluSp	SINE/Alu	1	297	(16)	1832101
597	25.0	3.6	1.8	chr19	15558766	15558928	(43058688)	C	MLT1G1	LTR/ERVL-MaLR	(68)	511	346	1832102
359	16.5	0.9	0.0	chr19	15558931	15559001	(43058615)	C	FLAM_C	SINE/Alu	(74)	59	5	1832103
2153	15.3	0.0	1.0	chr19	15559014	15559326	(43058290)	C	AluSz6	SINE/Alu	(2)	310	1	1832104
218	17.5	0.0	0.0	chr19	19051035	19051074	(39566542)	+	L2c	LINE/L2	3346	3385	(2)	1840159
359	21.1	17.4	1.5	chr19	19051156	19051285	(39566331)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	335	1840160
48	0.0	0.0	0.0	chr19	19051376	19051416	(39566200)	+	(TG)n	Simple_repeat	1	41	(0)	1840161
566	24.3	14.6	1.8	chr19	19179867	19180147	(39437469)	+	MLT1H	LTR/ERVL-MaLR	227	549	(0)	1840435
212	22.9	5.6	3.1	chr19	19180199	19180288	(39437328)	C	MIR	SINE/MIR	(68)	140	49	1840436
5930	5.5	0.4	0.0	chr19	29558884	29559613	(29058003)	+	L1PA7	LINE/L1	5413	6145	(9)	1850406
180	20.9	2.3	10.4	chr19	29559660	29559707	(29057909)	C	L3b	LINE/CR1	(113)	5119	5076	1850407
1067	26.7	6.9	4.4	chr19	29559823	29560229	(29057387)	C	MLT1H2	LTR/ERVL-MaLR	(7)	482	65	1850408
1067	26.0	10.0	6.3	chr19	29867900	29868312	(28749304)	+	MLT1H	LTR/ERVL-MaLR	99	545	(4)	1851029
389	20.0	0.0	0.0	chr19	29868319	29868388	(28749228)	C	MIR	SINE/MIR	(115)	147	78	1851032
1104	28.5	6.6	12.5	chr19	29868409	29868797	(28748819)	+	Tigger18a	DNA/TcMar-Tigger	76	441	(411)	1851033
1061	24.0	1.0	1.7	chr19	29903792	29904083	(28713533)	C	L1M5	LINE/L1	(2465)	3681	3392	1851102
274	21.6	1.3	0.0	chr19	29904071	29904144	(28713472)	C	L1M5	LINE/L1	(2867)	3279	3205	1851102
283	17.6	8.5	1.6	chr19	29904249	29904345	(28713271)	+	MLT1H	LTR/ERVL-MaLR	375	549	(0)	1851103
268	12.8	6.0	0.0	chr19	29904350	29904396	(28713220)	C	L1ME4b	LINE/L1	(355)	537	488	1851104
1012	24.1	14.4	5.4	chr19	32530610	32531105	(26086511)	+	MLT1H	LTR/ERVL-MaLR	1	548	(1)	1854955
928	15.7	2.4	0.1	chr19	34973115	34973285	(23644331)	C	MLT1E3	LTR/ERVL-MaLR	(8)	616	372	1859418
550	22.0	2.8	3.4	chr19	34973392	34973537	(23644079)	+	MER5A1	DNA/hAT-Charlie	1	145	(21)	1859419
783	18.9	1.8	6.1	chr19	34973560	34973603	(23644013)	C	MER5B	DNA/hAT-Charlie	(0)	178	143	1859420
56	0.0	0.0	0.0	chr19	34973604	34973651	(23643965)	+	(GT)n	Simple_repeat	1	48	(0)	1859421
2231	8.5	0.3	0.0	chr19	34973652	34973934	(23643682)	C	AluSx1	SINE/Alu	(28)	284	1	1859422
800	20.1	1.2	0.0	chr19	35164428	35164591	(23453025)	C	MLT1H	LTR/ERVL-MaLR	(10)	539	374	1859851
700	23.9	9.2	0.5	chr19	35164721	35164939	(23452677)	C	L2a	LINE/L2	(0)	3426	3187	1859852
1940	22.5	12.8	2.1	chr19	35166424	35166908	(23450708)	C	MLT1H	LTR/ERVL-MaLR	(3)	546	2	1859855
481	14.7	0.3	0.0	chr19	35925435	35925528	(22692088)	+	FLAM_C	SINE/Alu	2	65	(68)	1861477
763	23.7	11.6	2.6	chr19	35925482	35925794	(22691822)	+	MLT1F	LTR/ERVL-MaLR	284	595	(0)	1861478
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
26	23.7	3.8	3.6	chr19	36272210	36272218	(22345398)	+	(CTGTCT)n	Simple_repeat	67	110	(0)	1862255
768	26.2	8.2	3.5	chr19	37935448	37935908	(20681708)	C	MLT1H2	LTR/ERVL-MaLR	(6)	543	24	1865416
927	24.5	15.5	6.4	chr19	39809207	39809656	(18807960)	+	MLT1G1	LTR/ERVL-MaLR	81	578	(1)	1869667
778	14.0	0.0	8.1	chr19	43695924	43696059	(14921557)	+	FLAM_C	SINE/Alu	2	126	(17)	1877458
1173	29.1	11.5	2.6	chr19	43696118	43696582	(14921034)	C	MLT1H	LTR/ERVL-MaLR	(37)	512	1	1877459
2037	13.0	2.7	0.0	chr19	43708379	43708670	(14908946)	+	AluSx1	SINE/Alu	1	300	(12)	1877495
604	18.3	6.5	11.8	chr19	43708671	43708817	(14908799)	+	MER96B	DNA/hAT-Tip100	275	414	(3)	1877494
679	22.2	9.5	6.7	chr19	43708862	43709224	(14908392)	C	MLT1H2	LTR/ERVL-MaLR	(102)	447	80	1877496
1502	24.0	4.9	13.3	chr19	46289915	46290476	(12327140)	+	MLT1G1	LTR/ERVL-MaLR	1	512	(67)	1883298
2154	13.4	0.0	0.7	chr19	46290561	46290867	(12326749)	+	AluSz6	SINE/Alu	1	305	(7)	1883299
289	28.3	14.6	4.0	chr19	46510992	46511315	(12106301)	C	L2a	LINE/L2	(140)	3286	2838	1883870
439	22.8	10.9	7.2	chr19	46511329	46511635	(12105981)	C	MLT1H	LTR/ERVL-MaLR	(7)	548	220	1883877
1412	10.1	38.0	6.6	chr19	46511636	46511857	(12105759)	+	MER57A1	LTR/ERV1	1	282	(150)	1883878
944	23.6	14.2	7.7	chr19	47892220	47892697	(10724919)	+	LTR27D	LTR/ERV1	147	781	(63)	1887341
612	17.7	8.1	0.0	chr19	48526872	48527018	(10090598)	C	MER3	DNA/hAT-Charlie	(6)	203	44	1888958
1044	26.7	7.6	6.5	chr19	48527139	48527321	(10090295)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	307	1888959
2210	10.5	0.0	0.7	chr19	48527322	48527616	(10090000)	C	AluSx3	SINE/Alu	(18)	293	1	1888960
843	27.8	10.9	10.6	chr19	48711032	48711551	(9906065)	+	MLT1H1	LTR/ERVL-MaLR	1	529	(26)	1889444
1882	14.3	0.4	2.1	chr19	48711556	48711739	(9905877)	C	AluSx1	SINE/Alu	(0)	312	134	1889445
1852	15.1	0.3	1.1	chr19	48940572	48940855	(9676761)	+	AluSz6	SINE/Alu	1	282	(30)	1890021
851	9.8	0.8	0.8	chr19	48940857	48940979	(9676637)	C	AluJo	SINE/Alu	(188)	124	2	1890022
883	25.1	12.3	3.2	chr19	48941008	48941381	(9676235)	C	MLT1H	LTR/ERVL-MaLR	(37)	512	100	1890023
2013	9.9	7.8	0.0	chr19	49476865	49477146	(9140470)	+	AluSx1	SINE/Alu	1	306	(6)	1891171
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
673	14.1	1.2	2.0	chr19	51704496	51705028	(6912588)	+	MSR1	Satellite	1	528	(2)	1896078
1059	32.2	5.2	0.2	chr19	54084067	54084464	(4533152)	+	MLT1J	LTR/ERVL-MaLR	59	477	(35)	1901025
1100	26.9	11.1	7.7	chr19	54084470	54084839	(4532777)	C	MLT1H1	LTR/ERVL-MaLR	(1)	554	169	1901026
2280	11.3	0.0	2.2	chr19	54084840	54085158	(4532458)	+	AluSx	SINE/Alu	1	312	(0)	1901027
1111	22.6	16.9	2.7	chr19	54355487	54355931	(4261685)	+	MLT1F	LTR/ERVL-MaLR	1	521	(27)	1901549
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
662	24.1	10.9	5.3	chr19	56258663	56259170	(2358446)	+	MLT1G1	LTR/ERVL-MaLR	11	563	(6)	1905476
977	27.1	15.2	2.2	chr2	6143906	6144357	(236049172)	C	MLT1H	LTR/ERVL-MaLR	(25)	524	4	1918081
459	27.1	11.7	0.0	chr2	11867707	11867850	(230325679)	C	MIR	SINE/MIR	(11)	251	89	1927382
1027	23.6	10.9	7.0	chr2	11867898	11868384	(230325145)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	1927383
1342	27.0	7.4	3.2	chr2	15584860	15585387	(226608142)	+	MLT1H1	LTR/ERVL-MaLR	3	554	(1)	1932967
238	32.1	6.9	4.1	chr2	15585390	15585558	(226607971)	C	L2c	LINE/L2	(304)	3083	2910	1932968
1086	25.1	7.5	4.7	chr2	19697171	19697677	(222495852)	C	MLT1G1	LTR/ERVL-MaLR	(2)	547	3	1939171
806	24.1	13.8	2.6	chr2	20356092	20356481	(221837048)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	73	1940209
7777	3.4	0.0	0.0	chr2	23440148	23441490	(218752039)	+	L1PA3	LINE/L1	4811	6153	(2)	1944382
1335	22.5	4.4	6.0	chr2	23441525	23441923	(218751606)	C	MLT1G1	LTR/ERVL-MaLR	(37)	542	95	1944383
13	13.5	6.1	0.0	chr2	25043728	25043760	(217149769)	+	(TATG)n	Simple_repeat	1	35	(0)	1947190
2520	6.5	0.0	0.7	chr2	27169579	27169884	(215023645)	+	AluSx	SINE/Alu	1	304	(8)	1951303
265	24.1	0.0	0.0	chr2	27169885	27169938	(215023591)	+	L1MEd	LINE/L1	5681	5735	(429)	1951299
587	20.3	7.7	0.0	chr2	27169954	27170096	(215023433)	+	LTR50	LTR/ERVL	59	213	(582)	1951304
346	25.6	4.3	4.3	chr2	27170149	27170190	(215023339)	+	LTR50	LTR/ERVL	326	373	(422)	1951304
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
1149	24.0	21.9	8.8	chr2	39967840	39968352	(202225177)	+	MLT1G1	LTR/ERVL-MaLR	1	579	(0)	1971981
491	28.0	6.9	1.7	chr2	39968353	39968530	(202224999)	C	L1ME4a	LINE/L1	(451)	5673	5486	1971980
806	25.4	12.9	6.4	chr2	42076372	42076838	(200116691)	+	MLT1G3	LTR/ERVL-MaLR	93	594	(1)	1974906
1814	22.1	5.5	8.0	chr2	43119375	43119876	(199073653)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	1	1976909
1563	25.6	7.6	2.7	chr2	43525267	43525763	(198667766)	+	MLT1H1	LTR/ERVL-MaLR	1	535	(60)	1977636
618	18.2	4.8	4.2	chr2	44780552	44780717	(197412812)	+	MLT1H2	LTR/ERVL-MaLR	381	547	(2)	1979737
1739	25.6	5.7	6.1	chr2	65627901	65628461	(176565068)	+	MLT1G1	LTR/ERVL-MaLR	1	559	(20)	2011661
1059	29.8	7.8	1.9	chr2	65628476	65628968	(176564561)	+	L1M5	LINE/L1	4957	5481	(713)	2011659
1407	23.5	12.6	3.9	chr2	73186064	73186228	(169007301)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	420	2023276
981	20.7	0.0	0.0	chr2	73186229	73186402	(169007127)	+	MER45A	DNA/hAT-Tip100	1	174	(4)	2023277
1407	23.5	12.6	3.9	chr2	73186403	73186777	(169006752)	C	MLT1G3	LTR/ERVL-MaLR	(176)	419	1	2023276
927	25.3	5.9	4.5	chr2	74766651	74767085	(167426444)	+	MLT1F	LTR/ERVL-MaLR	90	530	(18)	2025921
1928	23.8	4.3	0.4	chr2	85747723	85748211	(156445318)	C	L2a	LINE/L2	(1)	3425	2917	2041430
794	24.3	11.2	8.1	chr2	85748235	85748690	(156444839)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	18	2041431
306	26.9	15.4	3.4	chr2	86368135	86368338	(155825191)	C	MIRb	SINE/MIR	(29)	239	7	2042555
26	0.0	0.0	0.0	chr2	86368499	86368526	(155825003)	+	(A)n	Simple_repeat	1	28	(0)	2042556
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
2122	12.8	0.0	0.0	chr2	97729946	97730242	(144463287)	+	AluSq2	SINE/Alu	2	298	(15)	2054066
727	24.4	7.4	12.2	chr2	97730243	97730673	(144462856)	C	MLT1H2	LTR/ERVL-MaLR	(59)	490	78	2054065
376	27.1	14.6	1.1	chr2	108229967	108230149	(133963380)	C	ERV3-16A3_I-int	LTR/ERVL	(2157)	3069	2858	2068957
194	28.1	14.2	1.9	chr2	108230176	108230280	(133963249)	C	OldhAT1	DNA/hAT-Ac	(2491)	357	238	2068958
1641	26.8	6.8	8.8	chr2	108230283	108231186	(133962343)	C	ERV3-16A3_I-int	LTR/ERVL	(2527)	2699	1790	2068957
648	26.1	4.9	8.5	chr2	118355679	118356008	(123837521)	+	MLT1H2	LTR/ERVL-MaLR	193	548	(1)	2083593
1888	26.9	8.6	4.9	chr2	118356018	118357023	(123836506)	+	MLT1H2-int	LTR/ERVL-MaLR	11	1170	(319)	2083593
918	24.0	11.9	11.8	chr2	120658035	120658578	(121534951)	+	MLT1H1	LTR/ERVL-MaLR	4	555	(0)	2087358
30	12.2	3.0	2.9	chr2	132285375	132285440	(109908089)	+	GA-rich	Low_complexity	1	68	(0)	2104356
883	22.2	3.9	10.7	chr2	132285454	132285825	(109907704)	+	L1MB8	LINE/L1	5797	6135	(43)	2104357
7653	7.8	2.8	1.6	chr2	142652828	142654708	(99538821)	C	L1PA7	LINE/L1	(3)	6151	4241	2119074
1723	20.0	9.1	7.0	chr2	149164865	149165375	(93028154)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	2127706
380	19.8	9.0	1.2	chr2	152752329	152752410	(89441119)	+	AluJb	SINE/Alu	81	169	(133)	2132882
3692	10.5	8.3	0.7	chr2	152752421	152753020	(89440509)	C	MER51C	LTR/ERV1	(10)	630	1	2132883
1031	13.4	0.6	2.8	chr2	156523997	156524172	(85669357)	C	L1PA17	LINE/L1	(19)	6147	5976	2137606
1004	26.1	10.6	4.4	chr2	156524279	156524728	(85668801)	C	MLT1H1	LTR/ERVL-MaLR	(10)	545	65	2137607
839	24.3	6.8	11.5	chr2	160429757	160430320	(81763209)	+	MLT1H2	LTR/ERVL-MaLR	1	549	(0)	2143066
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
345	30.8	8.9	3.7	chr2	168244431	168244673	(73948856)	+	UCON2	DNA?	124	380	(205)	2153268
1040	23.4	9.4	5.4	chr2	168272183	168272671	(73920858)	+	MLT1H	LTR/ERVL-MaLR	1	540	(9)	2153320
387	33.8	9.3	1.9	chr2	170313155	170313362	(71880167)	+	MIRb	SINE/MIR	37	261	(7)	2156430
271	31.9	8.1	7.8	chr2	172343964	172344221	(69849308)	+	L2c	LINE/L2	3077	3335	(52)	2160016
893	24.6	4.2	3.5	chr2	172344234	172344554	(69848975)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	206	2160017
2093	25.5	5.7	2.3	chr2	172416738	172417263	(69776266)	C	MLT1H1	LTR/ERVL-MaLR	(10)	545	1	2160136
1998	22.7	5.9	2.2	chr2	173816515	173817005	(68376524)	C	MLT1H1	LTR/ERVL-MaLR	(45)	510	1	2162222
34	21.8	0.0	2.5	chr2	174076760	174076838	(68116691)	+	(TA)n	Simple_repeat	1	79	(0)	2162675
726	25.0	15.7	6.4	chr2	174655899	174656334	(67537195)	+	MLT1H2	LTR/ERVL-MaLR	1	484	(5)	2163635
2281	16.4	3.2	0.8	chr2	179758195	179758592	(62434937)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2170596
611	28.2	14.1	6.4	chr2	179758593	179758918	(62434611)	+	MLT1H	LTR/ERVL-MaLR	134	499	(50)	2170595
243	40.9	7.0	1.6	chr2	179758953	179759141	(62434388)	+	L2b	LINE/L2	2930	3129	(246)	2170597
673	26.0	10.4	6.7	chr2	190838721	190838978	(51354551)	C	MLT1H	LTR/ERVL-MaLR	(85)	464	184	2184996
301	26.4	5.4	0.0	chr2	197858546	197858632	(44334897)	+	Arthur1C	DNA/hAT-Tip100	268	359	(4)	2194679
1371	27.2	6.8	2.8	chr2	197858690	197859174	(44334355)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	2	2194680
738	20.4	11.9	0.4	chr2	198184324	198184554	(44008975)	C	MLT1F	LTR/ERVL-MaLR	(4)	544	284	2195156
712	21.7	5.7	2.4	chr2	198184555	198184889	(44008640)	+	MER31B	LTR/ERV1	1	510	(4)	2195157
18	12.2	6.4	2.0	chr2	199911313	199911359	(42282170)	+	(CGCCGGC)n	Simple_repeat	1	50	(0)	2197519
13	29.3	0.0	0.0	chr2	199911453	199911494	(42282035)	+	(GCT)n	Simple_repeat	1	42	(0)	2197520
2456	21.4	0.8	2.2	chr2	207423857	207424352	(34769177)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	1	2209984
1354	23.5	15.2	5.7	chr2	217715330	217715822	(24477707)	+	MLT1H	LTR/ERVL-MaLR	2	541	(8)	2224837
255	22.4	5.6	4.5	chr2	217715842	217715930	(24477599)	C	L3	LINE/CR1	(261)	3838	3749	2224838
13	20.9	0.0	0.0	chr2	219507199	219507231	(22686298)	+	(TCCC)n	Simple_repeat	1	33	(0)	2228047
730	26.6	9.0	1.3	chr2	220012073	220012308	(22181221)	+	MLT1H1	LTR/ERVL-MaLR	290	545	(10)	2228869
18	21.9	1.9	3.8	chr2	220012321	220012372	(22181157)	+	(AT)n	Simple_repeat	1	53	(0)	2228870
1139	22.6	0.0	0.0	chr2	220012378	220012572	(22180957)	+	MER58A	DNA/hAT-Charlie	9	203	(21)	2228871
24	12.1	2.2	0.0	chr2	222866739	222866744	(19326785)	+	(GCCCC)n	Simple_repeat	1	45	(0)	2233372
30	5.5	0.0	0.0	chr2	222866745	222866782	(19326747)	+	(C)n	Simple_repeat	1	38	(0)	2233373
1180	27.2	11.5	2.4	chr2	223503666	223504162	(18689367)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	2	2234322
12	20.9	0.0	7.8	chr2	223837325	223837375	(18356154)	+	(GGCCC)n	Simple_repeat	1	51	(0)	2234958
49	20.2	3.3	5.9	chr2	223837625	223837804	(18355725)	+	(CCT)n	Simple_repeat	1	186	(0)	2234959
2423	8.3	0.3	0.0	chr2	228522753	228523042	(13670487)	+	AluY	SINE/Alu	1	291	(20)	2242196
443	29.7	4.6	2.4	chr2	228523069	228523237	(13670292)	C	MLT1H2	LTR/ERVL-MaLR	(23)	526	354	2242197
701	29.1	2.9	1.9	chr2	228523283	228523489	(13670040)	C	MLT1H2	LTR/ERVL-MaLR	(280)	209	1	2242197
189	34.6	5.9	1.6	chr2	228523623	228523751	(13669778)	C	L3	LINE/CR1	(826)	3273	3139	2242198
1972	27.8	4.2	2.2	chr2	229193009	229193552	(12999977)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	1	2243165
843	20.1	0.0	0.0	chr2	232859291	232859429	(9334100)	C	FLAM_A	SINE/Alu	(3)	139	1	2249462
1055	22.3	9.7	8.4	chr2	232859541	232860099	(9333430)	C	MLT1G1	LTR/ERVL-MaLR	(19)	529	5	2249463
401	36.4	0.0	0.0	chr2	234166209	234166348	(8027181)	+	L3	LINE/CR1	3854	3993	(106)	2251481
1229	24.2	7.3	5.1	chr2	234166353	234166871	(8026658)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	1	2251482
1875	22.1	11.8	6.8	chr2	236463698	236464227	(5729302)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	2255039
13	18.8	3.2	7.7	chr2	237874082	237874144	(4319385)	+	(CCAGG)n	Simple_repeat	1	65	(0)	2256978
336	27.1	2.5	0.0	chr2	237874419	237874536	(4318993)	+	MLT1N2	LTR/ERVL-MaLR	438	558	(4)	2256979
384	23.9	4.1	1.9	chr2	238125960	238127216	(4066313)	+	(TCTGTG)n	Simple_repeat	1	1309	(0)	2257395
1556	28.4	8.3	2.0	chr2	238576061	238576769	(3616760)	+	L2b	LINE/L2	1836	2593	(826)	2257984
659	20.2	13.5	6.0	chr2	238576774	238577057	(3616472)	C	MLT1H1	LTR/ERVL-MaLR	(9)	539	240	2257986
256	22.6	0.0	0.0	chr2	238577061	238577113	(3616416)	C	MLT1H1	LTR/ERVL-MaLR	(502)	53	1	2257986
529	21.9	16.5	3.0	chr2	238577113	238577310	(3616219)	C	MLT1H1-int	LTR/ERVL-MaLR	(0)	1409	1180	2257986
530	29.7	8.9	10.0	chr2	238838789	238839218	(3354311)	+	MLT1H	LTR/ERVL-MaLR	116	540	(9)	2258299
277	31.9	7.8	5.5	chr2	238839225	238839494	(3354035)	C	L2a	LINE/L2	(304)	3122	2830	2258300
2080	24.5	11.9	1.6	chr2	238839504	238840293	(3353236)	C	L1MC5a	LINE/L1	(1358)	1419	1252	2258301
205	27.4	11.0	0.0	chr20	1334388	1334460	(63109707)	+	MIRc	SINE/MIR	119	200	(68)	2264833
1960	24.1	4.5	3.8	chr20	2053692	2054192	(62389975)	C	MLT1G1	LTR/ERVL-MaLR	(2)	577	73	2266182
2342	11.0	0.0	0.0	chr20	2404642	2404940	(62039227)	C	AluSq2	SINE/Alu	(14)	299	1	2266902
855	21.1	12.9	8.8	chr20	2404991	2405361	(62038806)	C	MLT1H	LTR/ERVL-MaLR	(53)	496	1	2266903
624	27.8	1.1	1.1	chr20	4548411	4548588	(59895579)	C	MIR	SINE/MIR	(0)	262	85	2270911
1867	23.0	5.7	1.2	chr20	4548589	4549094	(59895073)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	20	2270912
217	37.6	7.4	0.0	chr20	5637951	5638075	(58806092)	+	L2c	LINE/L2	1191	1325	(2094)	2272923
516	22.7	8.9	0.6	chr20	5638118	5638281	(58805886)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	391	2272924
33	2.9	0.0	0.0	chr20	5638315	5638349	(58805818)	+	(CTC)n	Simple_repeat	1	35	(0)	2272925
1703	14.4	2.4	5.3	chr20	5638366	5638664	(58805503)	C	AluJr	SINE/Alu	(22)	290	1	2272926
424	20.9	17.1	9.6	chr20	8313184	8313431	(56130736)	C	MLT1H	LTR/ERVL-MaLR	(13)	536	207	2277066
340	31.6	0.0	8.8	chr20	8313444	8313568	(56130599)	C	MLT1H	LTR/ERVL-MaLR	(335)	154	41	2277066
2267	22.1	3.3	0.2	chr20	9131687	9132157	(55312010)	+	MLT1H2	LTR/ERVL-MaLR	3	488	(1)	2278439
23	3.7	0.0	0.0	chr20	9132281	9132308	(55311859)	+	(TG)n	Simple_repeat	1	28	(0)	2278440
1119	25.2	7.1	4.9	chr20	9139204	9139696	(55304471)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	75	2278451
1730	25.9	6.1	3.5	chr20	11031389	11031901	(53412266)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	23	2281434
568	27.1	8.0	3.1	chr20	11440068	11440353	(53003814)	C	L1MC4	LINE/L1	(290)	7752	7452	2281995
1718	26.9	6.7	0.4	chr20	11440354	11440813	(53003354)	C	MLT1H	LTR/ERVL-MaLR	(48)	501	11	2282001
814	23.6	9.7	6.0	chr20	11697158	11697504	(52746663)	C	LTR16A2	LTR/ERVL	(0)	495	135	2282343
1540	24.8	5.4	9.0	chr20	11697741	11697953	(52746214)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	344	2282344
2191	9.4	2.7	0.3	chr20	11697954	11698240	(52745927)	+	AluSp	SINE/Alu	11	304	(9)	2282345
590	18.6	18.8	1.7	chr20	11846289	11846468	(52597699)	C	MLT1H	LTR/ERVL-MaLR	(71)	478	261	2282598
537	26.5	0.8	0.0	chr20	11846488	11846619	(52597548)	C	MLT1H	LTR/ERVL-MaLR	(337)	212	80	2282598
772	24.2	4.8	7.7	chr20	11846632	11846976	(52597191)	+	MLT1H	LTR/ERVL-MaLR	171	547	(2)	2282599
1457	26.6	9.5	1.1	chr20	12407064	12407527	(52036640)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	41	2283406
1475	24.2	7.8	5.4	chr20	13226439	13226937	(51217230)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	38	2284574
2196	20.5	10.6	2.8	chr20	16674031	16674561	(47769606)	+	MLT1G1	LTR/ERVL-MaLR	1	577	(2)	2289752
974	25.7	14.2	4.0	chr20	17739415	17739885	(46704282)	+	MLT1H	LTR/ERVL-MaLR	23	549	(0)	2291376
840	24.2	16.1	8.7	chr20	17890180	17890709	(46553458)	+	MLT1G1	LTR/ERVL-MaLR	1	577	(2)	2291684
358	25.5	2.1	7.8	chr20	17890710	17890746	(46553421)	+	MIR	SINE/MIR	70	103	(159)	2291683
1600	22.0	7.5	1.1	chr20	17931399	17931774	(46512393)	+	MLT1H	LTR/ERVL-MaLR	67	447	(102)	2291781
2108	10.2	1.6	3.5	chr20	17931775	17932087	(46512080)	+	AluY	SINE/Alu	1	307	(4)	2291782
18	26.0	3.1	1.5	chr20	18021767	18021830	(46422337)	+	G-rich	Low_complexity	1	66	(0)	2291941
857	29.1	6.7	11.4	chr20	18401397	18401981	(46042186)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	1	2292609
239	32.4	11.5	0.0	chr20	18738064	18738171	(45705996)	+	L2a	LINE/L2	3300	3421	(5)	2293161
269	33.1	2.4	0.0	chr20	18738188	18738308	(45705859)	+	MIRb	SINE/MIR	2	125	(143)	2293162
292	22.9	16.2	0.0	chr20	18796376	18796458	(45647709)	+	MLT1H	LTR/ERVL-MaLR	64	162	(327)	2293242
830	16.9	0.7	0.0	chr20	18796596	18796731	(45647436)	+	MLT1H	LTR/ERVL-MaLR	400	536	(13)	2293242
1661	27.6	4.7	0.2	chr20	18839245	18839691	(45604476)	+	MLT1H	LTR/ERVL-MaLR	12	479	(70)	2293327
404	35.1	4.6	2.2	chr20	19745359	19745673	(44698494)	+	L1M6	LINE/L1	1370	1692	(4804)	2294568
1150	22.6	6.6	4.6	chr20	19745676	19746210	(44697957)	C	MLT1H2	LTR/ERVL-MaLR	(1)	548	1	2294569
285	7.5	0.0	0.0	chr20	20456488	20456527	(43987640)	+	MLT1H	LTR/ERVL-MaLR	115	154	(395)	2295633
247	12.9	17.7	9.7	chr20	20456678	20456780	(43987387)	+	MLT1H	LTR/ERVL-MaLR	304	416	(73)	2295633
268	22.3	16.1	0.0	chr20	23299776	23299869	(41144298)	C	MLT1H1	LTR/ERVL-MaLR	(5)	484	373	2299512
935	13.2	3.9	2.8	chr20	23299959	23300137	(41144030)	+	MLT1C	LTR/ERVL-MaLR	1	181	(286)	2299513
800	18.8	5.8	4.4	chr20	24546308	24546513	(39897654)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	341	2301052
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
327	23.9	4.3	13.4	chr20	32088739	32088852	(32355315)	C	MIR	SINE/MIR	(0)	262	163	2307628
1865	21.4	9.0	0.7	chr20	32088853	32089298	(32354869)	C	MLT1H2	LTR/ERVL-MaLR	(2)	487	1	2307629
203	17.9	4.9	0.0	chr20	35955503	35955541	(28488626)	+	MIR	SINE/MIR	156	196	(66)	2316479
441	25.2	5.9	3.0	chr20	35955587	35955717	(28488450)	+	MIRb	SINE/MIR	98	232	(36)	2316480
29	0.0	0.0	0.0	chr20	35955764	35955790	(28488377)	+	(TTTTGT)n	Simple_repeat	1	27	(0)	2316481
1699	9.1	0.0	0.5	chr20	35955801	35956020	(28488147)	C	AluSx1	SINE/Alu	(93)	219	1	2316482
1914	18.5	0.3	0.3	chr20	37491940	37492247	(26951920)	+	AluJb	SINE/Alu	1	308	(4)	2320142
956	27.5	12.1	6.2	chr20	37492248	37492710	(26951457)	C	MLT1G1	LTR/ERVL-MaLR	(66)	513	13	2320141
1389	22.6	6.6	11.0	chr20	38787956	38788446	(25655721)	C	MLT1H2	LTR/ERVL-MaLR	(7)	482	15	2322872
1020	21.8	1.8	3.8	chr20	40008168	40008525	(24435642)	+	MLT1H2	LTR/ERVL-MaLR	200	555	(0)	2325074
773	22.0	2.5	3.0	chr20	40486429	40486625	(23957542)	+	MLT1H	LTR/ERVL-MaLR	354	549	(0)	2325875
249	22.9	0.9	10.3	chr20	40486668	40486784	(23957383)	C	L1ME4a	LINE/L1	(77)	6047	5942	2325876
1675	21.0	16.7	0.7	chr20	41910647	41911077	(22533090)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	36	2328328
1723	20.5	8.9	2.4	chr20	43830682	43831129	(20613038)	+	MLT1G3	LTR/ERVL-MaLR	3	490	(89)	2332074
1899	17.6	0.7	0.3	chr20	43831170	43831465	(20612702)	+	AluJb	SINE/Alu	1	297	(15)	2332075
1351	4.8	0.0	0.0	chr20	44020313	44020478	(20423689)	+	L1PA8	LINE/L1	6006	6171	(1)	2332483
583	25.3	3.1	0.0	chr20	44020596	44020753	(20423414)	+	MER5A	DNA/hAT-Charlie	4	166	(23)	2332484
1076	23.1	6.3	4.3	chr20	44057663	44057987	(20386180)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	218	2332564
598	29.9	9.7	3.5	chr20	44268408	44268908	(20175259)	C	L2c	LINE/L2	(1)	3386	2833	2333056
576	22.1	1.8	6.3	chr20	44268912	44269085	(20175082)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	384	2333057
377	30.5	1.7	5.6	chr20	44269173	44269297	(20174870)	C	L2c	LINE/L2	(1)	3386	3267	2333058
183	11.1	0.0	0.0	chr20	44912932	44912958	(19531209)	C	MIRc	SINE/MIR	(29)	239	213	2334642
1567	24.6	11.1	5.5	chr20	44913040	44913413	(19530754)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	162	2334643
1789	10.8	7.5	5.2	chr20	44913414	44913700	(19530467)	C	AluSg	SINE/Alu	(16)	294	1	2334644
2686	17.9	2.4	0.0	chr20	46670367	46670806	(17773361)	+	MLT1H2	LTR/ERVL-MaLR	17	467	(22)	2338172
1969	25.1	7.8	0.4	chr20	46672542	46673040	(17771127)	+	MLT1H1	LTR/ERVL-MaLR	1	539	(16)	2338177
281	26.7	10.4	4.0	chr20	46673045	46673169	(17770998)	+	MIR	SINE/MIR	66	203	(65)	2338178
563	26.6	13.8	3.6	chr20	46720453	46720788	(17723379)	C	Charlie21a	DNA/hAT-Charlie	(758)	455	80	2338308
555	21.1	1.7	0.0	chr20	46720865	46720978	(17723189)	C	MLT1H2	LTR/ERVL-MaLR	(6)	483	368	2338309
475	28.9	4.7	5.1	chr20	46721051	46721280	(17722887)	C	MLT1H2	LTR/ERVL-MaLR	(347)	244	1	2338309
216	37.5	1.9	2.8	chr20	46721281	46721387	(17722780)	C	MIR1_Amn	SINE/MIR	(106)	124	19	2338310
580	29.2	10.2	0.0	chr20	47044663	47044847	(17399320)	C	MIR	SINE/MIR	(10)	252	47	2339081
1164	26.7	6.5	4.9	chr20	47045034	47045538	(17398629)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	2339082
1744	17.4	1.7	1.3	chr20	48908540	48908837	(15535330)	+	AluJr	SINE/Alu	1	299	(13)	2343180
805	26.1	11.6	6.9	chr20	48908838	48909200	(15534967)	+	MLT1H1	LTR/ERVL-MaLR	165	555	(0)	2343179
291	35.7	1.9	3.1	chr20	48909328	48909486	(15534681)	+	MLT1N2	LTR/ERVL-MaLR	133	289	(273)	2343181
2370	11.4	0.7	0.0	chr20	52625653	52625959	(11818208)	+	AluSc	SINE/Alu	1	309	(0)	2351873
1202	24.5	10.8	8.6	chr20	52626010	52626485	(11817682)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	107	2351874
2062	15.0	0.0	1.0	chr20	53533783	53534071	(10910096)	C	AluSz6	SINE/Alu	(23)	289	2	2353685
343	27.4	0.0	0.0	chr20	53534073	53534145	(10910022)	+	MLT1F1	LTR/ERVL-MaLR	98	170	(399)	2353683
302	16.9	1.4	11.2	chr20	53534227	53534306	(10909861)	+	MLT1H2	LTR/ERVL-MaLR	372	443	(46)	2353687
276	28.9	2.4	2.4	chr20	53534308	53534392	(10909775)	C	L2b	LINE/L2	(204)	3171	3087	2353688
1250	24.0	8.0	0.9	chr20	56798530	56798994	(7645173)	+	MLT1H	LTR/ERVL-MaLR	1	541	(8)	2359892
203	31.9	6.7	7.1	chr20	56798995	56799190	(7644977)	C	L2c	LINE/L2	(980)	2439	2245	2359888
779	26.8	12.0	9.7	chr20	57206975	57207508	(7236659)	+	MLT1H	LTR/ERVL-MaLR	2	549	(0)	2360771
242	25.8	7.6	1.0	chr20	57207516	57207613	(7236554)	+	L1ME4b	LINE/L1	455	559	(333)	2360772
16	18.8	4.0	1.9	chr20	57431985	57432034	(7012133)	+	G-rich	Low_complexity	1	52	(0)	2361168
375	19.1	7.9	9.5	chr20	57432161	57432224	(7011943)	+	MER45A	DNA/hAT-Tip100	32	102	(76)	2361169
2115	11.3	4.3	0.3	chr20	57432225	57432517	(7011650)	C	AluSz	SINE/Alu	(7)	305	1	2361170
904	27.5	7.4	4.0	chr20	58115286	58115501	(6328666)	+	MER58B	DNA/hAT-Charlie	110	339	(2)	2362425
390	35.1	1.1	4.1	chr20	58115666	58115860	(6328307)	+	MIRb	SINE/MIR	4	200	(68)	2362427
15	5.5	0.0	0.0	chr20	58115949	58115967	(6328200)	+	(AG)n	Simple_repeat	1	19	(0)	2362428
6452	21.6	9.7	10.5	chr20	58116014	58117987	(6326180)	+	L1MC3	LINE/L1	2	1881	(4627)	2362429
884	25.6	16.6	4.3	chr20	58184157	58184576	(6259591)	C	MLT1H1	LTR/ERVL-MaLR	(42)	513	32	2362542
2625	20.3	8.6	3.5	chr20	58381960	58382222	(6061945)	+	MER77B	LTR/ERVL	408	689	(11)	2362837
417	16.9	2.3	6.3	chr20	58382238	58382380	(6061787)	+	MLT1G3	LTR/ERVL-MaLR	374	541	(28)	2362836
317	26.3	12.2	0.7	chr20	58382426	58382563	(6061604)	+	L1MEd	LINE/L1	705	860	(6226)	2362834
894	25.7	13.4	2.7	chr20	58382567	58383159	(6061008)	+	LTR50	LTR/ERVL	7	518	(2)	2362839
1619	31.3	7.8	0.4	chr20	61240885	61241394	(3202773)	C	MLT1H1	LTR/ERVL-MaLR	(4)	551	1	2367127
759	19.1	4.4	0.0	chr20	63628567	63628697	(815470)	+	FLAM_C	SINE/Alu	1	137	(6)	2369787
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
797	22.4	0.5	0.1	chr21	8229975	8230765	(38479218)	+	(TCTC)n	Simple_repeat	2	795	(0)	2373327
446	20.9	0.1	6.5	chr21	8230776	8230919	(38479064)	+	MER39B	LTR/ERV1	298	454	(253)	2373328
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
4267	17.6	2.5	2.2	chr21	9371294	9372433	(37337550)	C	L1PA16	LINE/L1	(1)	6165	5026	2374477
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
480	21.9	10.6	5.4	chr21	14435501	14435685	(32274298)	C	MLT1H1	LTR/ERVL-MaLR	(6)	563	314	2377820
62	13.5	0.0	0.0	chr21	14435747	14435844	(32274139)	+	(GT)n	Simple_repeat	1	98	(0)	2377821
846	31.5	1.8	1.8	chr21	26874038	26874379	(19835604)	C	L1M5	LINE/L1	(901)	5245	4904	2394617
13	10.0	9.1	0.0	chr21	26874442	26874474	(19835509)	+	A-rich	Low_complexity	1	36	(0)	2394618
837	28.0	10.8	6.5	chr21	26874481	26874942	(19835041)	C	MLT1H1	LTR/ERVL-MaLR	(57)	498	15	2394619
346	30.3	3.2	0.0	chr21	28785522	28785710	(17924273)	+	MLT1H	LTR/ERVL-MaLR	73	316	(233)	2397252
304	25.3	1.3	0.0	chr21	28785746	28785820	(17924163)	+	MLT1H	LTR/ERVL-MaLR	398	473	(76)	2397252
249	36.1	4.4	1.8	chr21	28786019	28786128	(17923855)	+	L2c	LINE/L2	3274	3386	(1)	2397253
510	26.9	4.1	6.6	chr21	29827730	29827975	(16882008)	C	MLT1H2	LTR/ERVL-MaLR	(4)	545	302	2398913
38	2.8	0.0	0.0	chr21	29827976	29828012	(16881971)	+	(TC)n	Simple_repeat	1	37	(0)	2398914
503	28.8	6.2	9.6	chr21	29828013	29828298	(16881685)	C	MLT1H2	LTR/ERVL-MaLR	(236)	313	1	2398913
1587	22.5	14.4	1.9	chr21	36609691	36610202	(10099781)	+	MLT1H1	LTR/ERVL-MaLR	1	555	(0)	2410196
746	26.7	9.0	7.8	chr21	37183481	37183933	(9526050)	C	MLT1H	LTR/ERVL-MaLR	(12)	537	25	2411140
792	27.1	15.8	1.6	chr21	41637931	41638313	(5071670)	C	L2a	LINE/L2	(1)	3425	2978	2417779
669	27.6	5.8	9.3	chr21	41638333	41638786	(5071197)	C	MLT1H	LTR/ERVL-MaLR	(23)	526	50	2417780
319	29.2	7.0	2.1	chr21	43948948	43949136	(2760847)	C	L1M5	LINE/L1	(1324)	4822	4624	2421081
826	31.7	11.2	1.5	chr21	43949196	43949656	(2760327)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	39	2421082
211	33.7	3.9	0.0	chr21	45618965	45619062	(1090921)	+	L2c	LINE/L2	3284	3385	(2)	2423006
305	26.1	6.9	4.3	chr21	45619262	45619445	(1090538)	C	MLT1G	LTR/ERVL-MaLR	(0)	489	301	2423007
3273	17.6	2.8	8.0	chr21	45619448	45620175	(1089808)	C	LTR8	LTR/ERV1	(2)	689	1	2423008
1500	27.4	7.3	1.7	chr21	46090136	46090631	(619352)	+	MLT1H	LTR/ERVL-MaLR	2	549	(0)	2423498
399	20.7	1.4	1.2	chr21	46090632	46091503	(618480)	+	(GATGGT)n	Simple_repeat	1	884	(0)	2423499
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
302	19.6	1.8	0.0	chr22	11916982	11917037	(38901431)	+	MSTA-int	LTR/ERVL-MaLR	959	1015	(616)	2425531
978	18.8	15.3	2.7	chr22	11916991	11917268	(38901200)	C	THE1D-int	LTR/ERVL-MaLR	(407)	1224	907	2425532
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
28	3.0	2.9	0.0	chr22	23180571	23180604	(27637864)	+	(GGC)n	Simple_repeat	1	35	(0)	2437897
17104	15.8	4.6	1.4	chr22	24738175	24739768	(26078700)	+	L1M1	LINE/L1	1379	3069	(4496)	2440556
1806	24.7	6.3	3.1	chr22	24927033	24927491	(25890977)	C	MLT1H	LTR/ERVL-MaLR	(13)	536	58	2441005
686	26.1	6.7	3.3	chr22	26818001	26818301	(24000167)	C	MLT1H	LTR/ERVL-MaLR	(4)	545	234	2445244
449	27.0	7.5	9.3	chr22	27427449	27427652	(23390816)	C	MLT1H1	LTR/ERVL-MaLR	(7)	572	373	2446668
49	13.9	1.1	0.0	chr22	27427668	27427754	(23390714)	+	(TCTC)n	Simple_repeat	1	88	(0)	2446669
484	34.3	9.0	2.4	chr22	27492095	27492581	(23325887)	C	L2a	LINE/L2	(185)	3241	2717	2446810
994	26.0	6.7	7.5	chr22	27492663	27493141	(23325327)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	75	2446811
1840	19.7	19.6	1.1	chr22	27604458	27604924	(23213544)	+	MLT1G1	LTR/ERVL-MaLR	5	579	(0)	2447078
326	27.4	9.1	3.8	chr22	27604925	27604983	(23213485)	C	L2b	LINE/L2	(150)	3276	3220	2447077
2386	11.2	0.0	0.0	chr22	27604984	27605294	(23213174)	+	AluSc8	SINE/Alu	1	311	(0)	2447079
931	27.6	13.3	0.6	chr22	27676242	27676601	(23141867)	C	L1ME3	LINE/L1	(0)	6162	5750	2447272
1695	24.0	7.5	0.1	chr22	27676605	27677073	(23141395)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	3	2447273
1984	15.6	0.0	1.9	chr22	28955033	28955346	(21863122)	C	AluJo	SINE/Alu	(4)	308	1	2449632
360	25.4	6.1	1.4	chr22	28955380	28955519	(21862949)	C	MER113A	DNA/hAT-Charlie	(164)	150	4	2449629
1885	13.7	1.7	3.3	chr22	29846059	29846358	(20972110)	+	AluJo	SINE/Alu	6	300	(12)	2451477
1060	20.4	5.0	2.8	chr22	29846373	29846670	(20971798)	C	MLT1H2	LTR/ERVL-MaLR	(0)	555	246	2451478
1087	16.3	8.8	0.0	chr22	29846671	29846866	(20971602)	+	MER20	DNA/hAT-Charlie	1	215	(4)	2451479
674	22.7	4.2	1.6	chr22	32517479	32517666	(18300802)	+	MER53	DNA/hAT	1	193	(0)	2457116
1329	24.5	3.1	3.8	chr22	32517667	32517811	(18300657)	+	MLT1H	LTR/ERVL-MaLR	415	558	(2)	2457115
898	28.0	8.6	1.6	chr22	32915308	32915874	(17902594)	C	L2a	LINE/L2	(39)	3387	2762	2457980
1057	24.8	17.2	1.9	chr22	32915878	32916358	(17902110)	+	MLT1G	LTR/ERVL-MaLR	3	572	(19)	2457981
226	32.1	14.5	0.9	chr22	32916375	32916487	(17901981)	C	MIRc	SINE/MIR	(117)	151	21	2457982
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
751	28.1	10.4	2.5	chr22	34858944	34859093	(15959375)	+	L2a	LINE/L2	2577	2730	(689)	2461740
1890	22.8	9.7	0.4	chr22	34859094	34859591	(15958877)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	2461741
633	28.1	13.3	1.7	chr22	39226166	39226601	(11591867)	+	MLT1H1	LTR/ERVL-MaLR	4	504	(65)	2471158
1036	26.0	17.5	6.2	chr22	44137478	44137965	(6680503)	C	MLT1H	LTR/ERVL-MaLR	(0)	595	41	2481421
1586	23.0	5.8	4.3	chr22	46187770	46188266	(4630202)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	2485152
337	33.6	7.3	0.0	chr22	46531580	46531719	(4286749)	+	MIRb	SINE/MIR	1	151	(117)	2485678
12	17.7	5.0	2.4	chr22	46531834	46531873	(4286595)	+	(GGT)n	Simple_repeat	1	42	(0)	2485679
807	24.8	14.0	5.2	chr22	46552971	46553392	(4265076)	+	MLT1H2	LTR/ERVL-MaLR	20	484	(5)	2485708
1785	23.1	8.7	2.7	chr22	47333587	47334101	(3484367)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	2486729
15	14.5	3.9	5.7	chr22	48832524	48832574	(1985894)	+	(AATTTAT)n	Simple_repeat	1	53	(0)	2488659
226	29.9	6.7	2.0	chr22	48832665	48832763	(1985705)	C	MLT1G3	LTR/ERVL-MaLR	(14)	475	372	2488660
480	26.8	10.2	1.8	chr22	48832773	48832943	(1985525)	C	MLT1G3	LTR/ERVL-MaLR	(177)	418	232	2488660
224	25.5	3.8	0.0	chr3	4739555	4739605	(193555954)	C	MIRc	SINE/MIR	(135)	133	81	2499521
1000	28.3	11.9	4.1	chr3	4739661	4740169	(193555390)	C	MLT1G1	LTR/ERVL-MaLR	(7)	572	19	2499522
844	23.0	7.0	0.5	chr3	8424357	8424557	(189871002)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	335	2505323
241	26.3	16.1	4.8	chr3	8424644	8424747	(189870812)	+	MIRb	SINE/MIR	117	234	(34)	2505324
1129	26.1	9.6	3.0	chr3	9119555	9119993	(189175566)	+	MLT1H1	LTR/ERVL-MaLR	18	488	(67)	2506531
470	27.7	9.5	3.6	chr3	9120038	9120227	(189175332)	+	L2b	LINE/L2	3197	3387	(0)	2506530
229	28.4	12.8	4.1	chr3	9120201	9120321	(189175238)	C	L2c	LINE/L2	(138)	3249	3117	2506532
2370	11.1	0.0	0.0	chr3	9298770	9299075	(188996484)	+	AluSx1	SINE/Alu	1	306	(6)	2506921
2314	11.0	0.7	0.0	chr3	9299081	9299389	(188996170)	+	AluSc8	SINE/Alu	1	311	(0)	2506922
561	18.3	2.4	0.8	chr3	9299470	9299590	(188995969)	+	MLT1H2	LTR/ERVL-MaLR	367	489	(0)	2506920
2192	10.7	1.7	0.0	chr3	9299628	9299917	(188995642)	+	AluSx	SINE/Alu	1	295	(17)	2506923
17	10.4	7.0	2.2	chr3	9769950	9769992	(188525567)	+	(GGCTC)n	Simple_repeat	1	46	(0)	2507909
309	26.2	9.3	0.0	chr3	9770151	9770257	(188525302)	C	MIRb	SINE/MIR	(118)	150	33	2507910
2417	20.9	7.7	1.0	chr3	10371028	10371535	(187924024)	+	MLT1H	LTR/ERVL-MaLR	2	546	(3)	2509277
1234	24.5	5.4	1.1	chr3	13269792	13270292	(185025267)	+	MLT1H1	LTR/ERVL-MaLR	1	587	(8)	2514941
271	33.6	0.9	5.3	chr3	13270332	13270444	(185025115)	C	L2c	LINE/L2	(0)	3387	3280	2514942
1037	24.1	7.0	2.8	chr3	16524298	16524899	(181770660)	C	MLT1G3	LTR/ERVL-MaLR	(0)	591	1	2520645
504	24.6	7.6	9.2	chr3	16554127	16554472	(181741087)	+	MLT1H	LTR/ERVL-MaLR	66	569	(0)	2520695
259	26.4	7.5	0.0	chr3	17078120	17078206	(181217353)	C	MLT1M	LTR/ERVL-MaLR	(484)	188	95	2521374
938	20.4	3.6	1.1	chr3	17078215	17078456	(181217103)	C	MLT1H2	LTR/ERVL-MaLR	(0)	555	282	2521375
222	31.4	13.6	0.0	chr3	17078463	17078564	(181216995)	C	L3	LINE/CR1	(606)	3493	3376	2521376
938	15.0	0.0	1.5	chr3	23869609	23869741	(174425818)	+	FLAM_C	SINE/Alu	3	133	(10)	2530922
250	31.8	10.0	5.0	chr3	23869742	23869845	(174425714)	C	LTR16C	LTR/ERVL	(134)	355	247	2530921
435	25.9	14.6	8.6	chr3	23869884	23870431	(174425128)	C	MLT1F1	LTR/ERVL-MaLR	(0)	591	1	2530923
954	22.1	16.9	7.9	chr3	24293925	24294416	(174001143)	+	MLT1H	LTR/ERVL-MaLR	1	545	(4)	2531647
403	29.1	9.0	5.9	chr3	24294441	24294761	(174000798)	+	MLT1L	LTR/ERVL-MaLR	197	528	(82)	2531648
620	28.9	9.2	10.6	chr3	27011740	27012321	(171283238)	C	MLT1G	LTR/ERVL-MaLR	(24)	531	1	2535475
1711	24.9	10.3	0.0	chr3	28066849	28067333	(170228226)	+	MLT1H	LTR/ERVL-MaLR	1	541	(8)	2537236
2962	26.2	9.8	10.4	chr3	28214185	28215455	(170080104)	C	MLT1H1-int	LTR/ERVL-MaLR	(136)	1273	6	2537465
1858	26.6	4.3	2.1	chr3	28215453	28215963	(170079596)	C	MLT1H1	LTR/ERVL-MaLR	(12)	543	18	2537465
932	33.2	6.7	2.6	chr3	29081825	29082282	(169213277)	+	MLT1H2	LTR/ERVL-MaLR	2	479	(10)	2538683
575	27.9	15.0	5.9	chr3	31696989	31697429	(166598130)	+	MLT1H2	LTR/ERVL-MaLR	2	489	(0)	2542477
1171	27.3	11.4	3.8	chr3	32236225	32236730	(166058829)	+	MLT1H1	LTR/ERVL-MaLR	6	555	(0)	2543491
585	21.1	9.0	2.8	chr3	32236733	32236908	(166058651)	+	MER46C	DNA/TcMar-Tigger	144	331	(7)	2543492
1358	23.9	9.5	1.5	chr3	37400476	37400814	(160894745)	C	MLT1H	LTR/ERVL-MaLR	(48)	501	133	2551509
2284	20.2	6.5	1.6	chr3	37463254	37463751	(160831808)	C	MLT1H	LTR/ERVL-MaLR	(13)	536	13	2551620
2508	13.6	4.3	4.0	chr3	37463848	37464110	(160831449)	C	MER65A	LTR/ERV1	(0)	445	181	2551621
1835	16.0	2.2	2.9	chr3	40845660	40845971	(157449588)	+	AluJr	SINE/Alu	1	310	(2)	2556669
695	26.4	16.1	5.7	chr3	40845972	40845994	(157449565)	+	MLT1H	LTR/ERVL-MaLR	314	340	(209)	2556668
33	5.2	0.0	0.0	chr3	40845995	40846034	(157449525)	+	(CACACA)n	Simple_repeat	1	40	(0)	2556670
695	26.4	16.1	5.7	chr3	40846035	40846215	(157449344)	+	MLT1H	LTR/ERVL-MaLR	341	549	(0)	2556668
514	29.9	1.6	2.3	chr3	40846216	40846430	(157449129)	C	MIRb	SINE/MIR	(54)	214	1	2556671
1370	23.9	15.0	2.9	chr3	41125175	41125652	(157169907)	+	MLT1H	LTR/ERVL-MaLR	4	549	(0)	2557060
1902	21.9	7.1	3.9	chr3	42432298	42432762	(155862797)	+	MLT1H1	LTR/ERVL-MaLR	27	507	(48)	2559097
266	25.7	11.6	6.4	chr3	42432944	42433130	(155862429)	C	MamGypLTR1d	LTR/Gypsy	(604)	199	2	2559094
1287	23.8	8.5	9.4	chr3	46007967	46008499	(152287060)	+	MLT1H1	LTR/ERVL-MaLR	28	555	(0)	2564766
882	21.8	7.0	1.9	chr3	46008534	46008780	(152286779)	+	MLT1G3	LTR/ERVL-MaLR	1	242	(349)	2564767
495	12.2	18.2	0.0	chr3	46102152	46102250	(152193309)	C	MLT1G	LTR/ERVL-MaLR	(7)	482	369	2564916
1004	29.9	11.1	2.5	chr3	46102223	46102358	(152193201)	C	MLT1G	LTR/ERVL-MaLR	(103)	452	292	2564916
70	0.0	2.9	0.0	chr3	46102359	46102427	(152193132)	+	(ATCT)n	Simple_repeat	1	71	(0)	2564917
1004	29.3	11.3	2.2	chr3	46102428	46102708	(152192851)	C	MLT1G	LTR/ERVL-MaLR	(279)	312	3	2564916
28	0.0	0.0	0.0	chr3	55954082	55954112	(142341447)	+	(A)n	Simple_repeat	1	31	(0)	2581289
2402	7.1	1.4	0.3	chr3	56594405	56594698	(141700861)	+	AluY	SINE/Alu	1	297	(14)	2582403
244	32.8	0.0	0.0	chr3	56594842	56594905	(141700654)	C	L2b	LINE/L2	(2)	3373	3310	2582404
661	27.3	8.4	2.8	chr3	66116292	66116780	(132178779)	C	MLT1H2	LTR/ERVL-MaLR	(1)	554	1	2598716
2030	19.1	8.9	4.6	chr3	69700676	69700941	(128594618)	+	MLT1H2	LTR/ERVL-MaLR	8	283	(206)	2604650
945	16.8	0.0	0.0	chr3	69700950	69701074	(128594485)	C	AluJr	SINE/Alu	(187)	125	1	2604651
2030	19.1	8.9	4.6	chr3	69701075	69701267	(128594292)	+	MLT1H2	LTR/ERVL-MaLR	284	489	(0)	2604650
249	35.0	0.0	0.0	chr3	69701268	69701347	(128594212)	C	L2	LINE/L2	(995)	2424	2345	2604652
309	33.0	9.9	0.6	chr3	69701343	69701516	(128594043)	+	L2c	LINE/L2	3190	3381	(6)	2604653
960	25.7	7.1	4.8	chr3	71161167	71161640	(127133919)	C	MLT1H	LTR/ERVL-MaLR	(4)	545	4	2606802
1324	22.5	6.5	5.8	chr3	72192375	72192886	(126102673)	+	MLT1H1	LTR/ERVL-MaLR	1	595	(0)	2608670
1908	22.5	10.0	1.6	chr3	72257557	72258057	(126037502)	+	MLT1H	LTR/ERVL-MaLR	1	548	(1)	2608802
231	33.3	0.0	0.0	chr3	72258160	72258219	(126037340)	C	MIRc	SINE/MIR	(164)	104	45	2608803
940	26.0	6.2	8.1	chr3	72325592	72326124	(125969435)	C	MLT1G	LTR/ERVL-MaLR	(13)	542	10	2608950
590	24.9	13.1	3.6	chr3	72732569	72732905	(125562654)	+	MLT1H2	LTR/ERVL-MaLR	66	439	(50)	2609835
14	7.8	3.5	3.3	chr3	72733054	72733082	(125562477)	+	(AGG)n	Simple_repeat	1	30	(0)	2609836
806	24.2	11.9	3.2	chr3	72735195	72735569	(125559990)	C	MLT1H2	LTR/ERVL-MaLR	(12)	477	66	2609844
1395	29.5	3.7	1.7	chr3	75647835	75648337	(122647222)	C	BSR/Beta	Satellite	(50)	513	1	2614538
793	25.3	1.9	3.4	chr3	75648391	75649756	(122645803)	C	BSR/Beta	Satellite	(2)	1346	1	2614538
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
1771	25.4	6.0	5.5	chr3	94307627	94308066	(103987493)	C	MLT1H	LTR/ERVL-MaLR	(4)	545	97	2634137
359	23.3	12.1	5.4	chr3	107103745	107104109	(91191450)	+	MLT1H	LTR/ERVL-MaLR	152	533	(16)	2650374
577	19.7	11.0	9.1	chr3	108146228	108146450	(90149109)	+	MLT1H2	LTR/ERVL-MaLR	282	549	(6)	2651902
522	28.1	7.0	13.5	chr3	108146457	108146901	(90148658)	C	LTR16C	LTR/ERVL	(9)	486	74	2651903
372	26.3	5.6	1.7	chr3	111775107	111775226	(86520333)	C	MIR	SINE/MIR	(34)	228	104	2656907
1718	22.9	3.3	2.9	chr3	113037950	113038395	(85257164)	+	MER39	LTR/ERV1	260	707	(0)	2658615
784	27.1	6.3	7.6	chr3	113038403	113039047	(85256512)	C	MLT1H	LTR/ERVL-MaLR	(0)	595	1	2658616
940	23.0	10.9	11.2	chr3	118596994	118597482	(79698077)	+	MLT1H2	LTR/ERVL-MaLR	1	487	(2)	2666388
520	17.8	1.0	0.0	chr3	118597486	118597586	(79697973)	+	LTR33C	LTR/ERVL	526	627	(2)	2666389
293	29.7	4.1	4.1	chr3	119241130	119241252	(79054307)	C	MIRb	SINE/MIR	(47)	221	99	2667269
2002	20.4	9.8	5.0	chr3	119640994	119641485	(78654074)	+	L1ME3A	LINE/L1	5309	5829	(344)	2667930
510	23.2	9.9	6.2	chr3	119641511	119641748	(78653811)	+	MLT1F1	LTR/ERVL-MaLR	312	579	(0)	2667932
735	17.5	10.6	4.5	chr3	119641751	119641972	(78653587)	+	MamRep1151	LTR?	392	628	(81)	2667933
1070	24.2	10.2	7.8	chr3	119801621	119802144	(78493415)	C	MLT1H1	LTR/ERVL-MaLR	(2)	553	20	2668197
1457	23.4	9.6	3.4	chr3	127751202	127751709	(70543850)	+	MLT1H	LTR/ERVL-MaLR	4	546	(3)	2680601
289	17.8	21.1	1.9	chr3	130278561	130278663	(68016896)	C	MLT1G3-int	LTR/ERVL-MaLR	(945)	464	337	2685263
716	13.9	5.4	0.0	chr3	130278676	130278797	(68016762)	+	MLT1H	LTR/ERVL-MaLR	393	521	(28)	2685269
311	25.6	0.0	6.0	chr3	130278875	130278957	(68016602)	+	L1ME3D	LINE/L1	2412	2489	(3657)	2685270
3262	20.9	8.6	3.1	chr3	135301929	135302702	(62992857)	C	MER21C	LTR/ERVL	(16)	922	9	2692671
24	15.8	0.0	3.8	chr3	141051386	141051438	(57244121)	+	(GGC)n	Simple_repeat	1	53	(0)	2701695
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
2320	26.1	5.8	2.3	chr3	143203927	143204495	(55091064)	+	MLT1G	LTR/ERVL-MaLR	2	591	(0)	2705343
1521	19.3	5.3	1.4	chr3	143784758	143785104	(54510455)	+	MLT1A0	LTR/ERVL-MaLR	5	365	(0)	2706153
1347	25.0	5.8	10.2	chr3	143785105	143785646	(54509913)	+	MLT1H	LTR/ERVL-MaLR	30	549	(0)	2706152
1740	24.7	5.7	5.1	chr3	150076301	150076786	(48218773)	+	MLT1H2	LTR/ERVL-MaLR	1	489	(0)	2714637
589	30.4	5.8	3.8	chr3	150076787	150076816	(48218743)	+	MIR	SINE/MIR	235	262	(0)	2714636
1774	19.1	5.4	1.9	chr3	151023993	151024366	(47271193)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	1	2716201
729	26.1	15.2	5.2	chr3	151024389	151024852	(47270707)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	37	2716202
407	29.7	5.3	3.5	chr3	158719940	158720154	(39575405)	C	MIR	SINE/MIR	(6)	262	48	2727179
43	2.5	0.0	0.0	chr3	158720234	158720274	(39575285)	+	(GT)n	Simple_repeat	1	41	(0)	2727180
22	0.0	0.0	0.0	chr3	158720275	158720298	(39575261)	+	(AG)n	Simple_repeat	1	24	(0)	2727181
1018	18.6	2.9	1.2	chr3	158720395	158720634	(39574925)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	224	2727182
843	28.0	11.2	3.2	chr3	171882110	171882619	(26412940)	+	MLT1H1	LTR/ERVL-MaLR	1	591	(0)	2745235
311	30.0	11.3	0.0	chr3	171882661	171882770	(26412789)	C	MIRc	SINE/MIR	(128)	140	17	2745236
211	38.5	9.6	0.6	chr3	176071823	176072002	(22223557)	+	L2c	LINE/L2	2987	3184	(203)	2751200
841	31.5	11.8	4.8	chr3	176072017	176072513	(22223046)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	12	2751201
998	28.0	6.5	7.7	chr3	176902607	176903151	(21392408)	C	MLT1H	LTR/ERVL-MaLR	(1)	548	11	2752258
1201	28.6	6.3	4.8	chr3	193908156	193908642	(4386917)	+	MLT1H	LTR/ERVL-MaLR	1	537	(12)	2780211
199	28.9	2.6	14.8	chr3	193908720	193908942	(4386617)	C	L3	LINE/CR1	(142)	3957	3763	2780212
1047	23.9	9.7	7.7	chr3	194154124	194154618	(4140941)	+	MLT1H1	LTR/ERVL-MaLR	3	508	(47)	2780637
1227	27.0	6.4	1.3	chr3	194154636	194155058	(4140501)	C	MER110A	LTR/ERV1	(21)	593	39	2780638
1905	8.7	9.0	1.8	chr4	3065235	3065511	(187149044)	C	AluSx3	SINE/Alu	(7)	304	6	2792704
2007	18.7	5.8	0.5	chr4	3065545	3065937	(187148618)	C	MER47B	DNA/TcMar-Tigger	(2)	416	2	2792705
1181	28.3	7.7	2.8	chr4	3667075	3667568	(186546987)	+	MLT1H	LTR/ERVL-MaLR	26	545	(4)	2793449
25	12.3	1.7	5.0	chr4	3667624	3667682	(186546873)	+	GA-rich	Low_complexity	1	60	(0)	2793450
2564	15.5	2.8	0.2	chr4	3849629	3850042	(186364513)	C	MSTB	LTR/ERVL-MaLR	(1)	425	1	2793710
714	26.7	12.3	1.1	chr4	3850043	3850422	(186364133)	+	MLT1H2	LTR/ERVL-MaLR	107	552	(3)	2793709
472	24.7	3.6	3.6	chr4	4746263	4746455	(185468100)	C	Charlie15b	DNA/hAT-Charlie	(818)	243	51	2795386
845	25.9	14.7	4.0	chr4	4746551	4747004	(185467551)	C	MLT1H	LTR/ERVL-MaLR	(17)	532	22	2795387
563	22.2	16.5	3.6	chr4	5330414	5330747	(184883808)	C	MLT1H2	LTR/ERVL-MaLR	(24)	555	186	2796395
1478	26.0	5.3	5.0	chr4	5940584	5941126	(184273429)	+	MLT1H	LTR/ERVL-MaLR	2	546	(3)	2797455
747	31.6	1.0	1.1	chr4	5941166	5941431	(184273124)	C	MIR	SINE/MIR	(1)	261	2	2797456
1773	27.3	3.3	0.0	chr4	6551471	6551968	(183662587)	+	MLT1H1	LTR/ERVL-MaLR	38	552	(3)	2798590
660	25.5	4.9	7.1	chr4	6629553	6629765	(183584790)	+	MLT1H1	LTR/ERVL-MaLR	309	519	(36)	2798772
1756	16.4	0.3	0.7	chr4	6629766	6630058	(183584497)	+	AluJb	SINE/Alu	1	292	(20)	2798773
617	18.2	13.9	1.0	chr4	6852621	6852824	(183361731)	C	MLT1H2	LTR/ERVL-MaLR	(13)	542	308	2799207
287	21.7	4.6	0.0	chr4	6852915	6852997	(183361558)	C	MLT1H2	LTR/ERVL-MaLR	(396)	93	7	2799207
290	27.8	2.2	4.3	chr4	6853010	6853103	(183361452)	+	HAL1	LINE/L1	450	541	(1966)	2799208
415	20.1	16.4	8.1	chr4	7683113	7683323	(182531232)	C	MLT1H	LTR/ERVL-MaLR	(14)	535	304	2800538
412	29.0	9.6	3.2	chr4	7683330	7683610	(182530945)	C	MLT1H	LTR/ERVL-MaLR	(102)	447	147	2800539
205	29.4	0.0	0.0	chr4	7737620	7737670	(182476885)	C	MIRc	SINE/MIR	(28)	240	190	2800615
766	30.3	9.0	0.6	chr4	7737695	7738123	(182476432)	C	MLT1G3	LTR/ERVL-MaLR	(5)	574	92	2800616
13	16.4	2.8	2.7	chr4	9860164	9860199	(180354356)	+	(CCCT)n	Simple_repeat	1	37	(0)	2803767
599	29.4	8.8	4.2	chr4	13184112	13184427	(177030128)	+	MLT1G1	LTR/ERVL-MaLR	181	479	(100)	2808928
519	11.4	1.2	0.0	chr4	13184428	13184506	(177030049)	C	MADE1	DNA/TcMar-Mariner	(0)	80	1	2808931
808	29.2	14.4	3.9	chr4	24408431	24408918	(165805637)	+	MLT1F1	LTR/ERVL-MaLR	14	561	(8)	2827072
612	24.4	6.8	1.4	chr4	24408930	24409137	(165805418)	+	L1MC5	LINE/L1	9076	9295	(9)	2827073
867	24.3	8.5	7.6	chr4	24914322	24914763	(165299792)	+	MLT1H	LTR/ERVL-MaLR	80	545	(4)	2827978
392	33.1	0.0	3.5	chr4	24919934	24920074	(165294481)	C	MIR3	SINE/MIR	(60)	148	13	2827985
977	25.1	10.3	10.8	chr4	24920110	24920696	(165293859)	C	MLT1H1	LTR/ERVL-MaLR	(2)	577	1	2827986
713	23.5	5.2	3.5	chr4	24933535	24933763	(165280792)	C	L2a	LINE/L2	(0)	3426	3194	2828007
1091	26.4	8.2	8.4	chr4	24933764	24934131	(165280424)	C	MLT1H	LTR/ERVL-MaLR	(4)	545	184	2828008
947	22.7	11.4	5.1	chr4	25078409	25078740	(165135815)	+	MLT1H2	LTR/ERVL-MaLR	73	445	(104)	2828247
1854	15.5	6.0	3.7	chr4	25078741	25079095	(165135460)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2828248
748	23.1	10.0	7.6	chr4	26033469	26034005	(164180550)	C	MLT1H	LTR/ERVL-MaLR	(6)	543	4	2830253
750	31.8	7.4	3.8	chr4	26147794	26147892	(164066663)	C	L2b	LINE/L2	(660)	2759	2667	2830468
785	19.3	6.9	1.1	chr4	26147893	26148070	(164066485)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2830471
750	31.8	7.4	3.8	chr4	26148071	26148633	(164065922)	C	L2b	LINE/L2	(753)	2666	2072	2830468
7489	25.4	4.4	2.6	chr4	32621426	32623322	(157591233)	C	LTR53-int	LTR/ERVL	(239)	3317	969	2839697
845	28.1	9.5	7.7	chr4	37252466	37252971	(152961584)	C	MLT1H	LTR/ERVL-MaLR	(4)	545	30	2845890
1446	23.3	19.1	2.1	chr4	41826442	41826940	(148387615)	+	LTR50	LTR/ERVL	43	652	(143)	2854686
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
725	32.0	6.5	1.9	chr4	49492234	49492555	(140722000)	+	MLT1G1	LTR/ERVL-MaLR	208	545	(34)	2865153
764	28.8	7.4	6.3	chr4	53868338	53868763	(136345792)	+	MLT1H2	LTR/ERVL-MaLR	36	466	(23)	2868346
564	26.2	11.7	5.2	chr4	54419772	54420154	(135794401)	+	MLT1H2	LTR/ERVL-MaLR	63	473	(16)	2869273
641	29.1	7.0	3.5	chr4	57295133	57295411	(132919144)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	261	2874300
25708	5.5	0.7	0.6	chr4	57295412	57299054	(132915501)	C	L1PA5	LINE/L1	(0)	6154	2496	2874301
1533	18.6	20.8	6.0	chr4	67398023	67398473	(122816082)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	13	2886865
233	36.7	6.4	2.1	chr4	73620948	73621111	(116593444)	C	MER5B	DNA/hAT-Charlie	(0)	189	7	2895137
854	26.5	10.7	8.2	chr4	74061302	74061753	(116152802)	+	MLT1H	LTR/ERVL-MaLR	9	516	(33)	2895665
13	25.8	0.0	0.0	chr4	74099043	74099079	(116115476)	+	(CAG)n	Simple_repeat	1	37	(0)	2895705
35	31.1	2.4	0.8	chr4	94000276	94000400	(96214155)	+	GA-rich	Low_complexity	1	128	(0)	2924362
642	29.0	8.7	10.8	chr4	94000401	94000582	(96213973)	C	MLT1G	LTR/ERVL-MaLR	(27)	552	375	2924363
1103	14.1	1.0	2.5	chr4	94000583	94000779	(96213776)	C	L1PA16	LINE/L1	(9)	6157	5964	2924364
664	27.9	10.5	4.7	chr4	94000780	94001132	(96213423)	C	MLT1G	LTR/ERVL-MaLR	(205)	374	29	2924363
805	26.0	2.1	1.3	chr4	100292076	100292305	(89922250)	+	L2a	LINE/L2	1507	1738	(1681)	2932870
706	24.7	4.2	5.0	chr4	110919299	110919537	(79295018)	C	MLT1H-int	LTR/ERVL-MaLR	(1171)	238	2	2947256
252	23.2	6.8	0.0	chr4	110919539	110919607	(79294948)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	476	2947256
729	26.7	9.3	8.3	chr4	110919702	110920040	(79294515)	C	MLT1H	LTR/ERVL-MaLR	(104)	445	103	2947256
836	25.4	5.1	0.1	chr4	111221446	111221647	(78992908)	C	MLT1H2	LTR/ERVL-MaLR	(15)	540	287	2947589
520	22.7	5.7	0.8	chr4	111221693	111221825	(78992730)	C	MLT1H2	LTR/ERVL-MaLR	(337)	212	73	2947589
1904	25.3	4.7	0.6	chr4	123580796	123581268	(66633287)	+	MLT1H1	LTR/ERVL-MaLR	44	536	(19)	2964216
5181	12.7	2.4	0.4	chr4	124926810	124927586	(65286969)	C	LTR1B1	LTR/ERV1	(0)	818	26	2965924
2153	12.7	0.7	0.0	chr4	139440616	139440906	(50773649)	C	AluSx1	SINE/Alu	(15)	297	5	2984640
1543	26.3	8.2	1.5	chr4	139440931	139441386	(50773169)	C	MLT1H	LTR/ERVL-MaLR	(49)	500	12	2984641
1229	24.6	5.6	1.4	chr4	140571419	140571908	(49642647)	+	MLT1G	LTR/ERVL-MaLR	1	595	(0)	2986420
2396	8.4	0.0	0.0	chr4	144878635	144878918	(45335637)	+	AluSp	SINE/Alu	1	284	(29)	2992147
1661	24.9	4.2	3.4	chr4	144878919	144879135	(45335420)	+	MLT1H	LTR/ERVL-MaLR	334	550	(5)	2992146
439	27.9	1.9	7.8	chr4	144879215	144879381	(45335174)	+	Charlie4z	DNA/hAT-Charlie	2	158	(9)	2992148
634	23.6	20.9	8.0	chr4	146232193	146232666	(43981889)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	5	2994032
692	25.1	5.0	8.7	chr4	147465319	147465771	(42748784)	+	MLT1H	LTR/ERVL-MaLR	56	549	(0)	2995640
1970	21.9	6.5	2.3	chr4	165428517	165428998	(24785557)	C	MLT1D	LTR/ERVL-MaLR	(1)	504	1	3021075
595	24.7	0.0	3.2	chr4	165429045	165429199	(24785356)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	400	3021076
742	24.6	10.6	3.1	chr4	169044807	169045032	(21169523)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	335	3025699
363	28.3	1.9	4.5	chr4	169045092	169045202	(21169353)	C	MLT1G1	LTR/ERVL-MaLR	(449)	120	13	3025699
1859	16.8	0.0	1.6	chr4	169045285	169045594	(21168961)	+	AluJr	SINE/Alu	3	307	(5)	3025700
1132	21.7	10.4	4.0	chr4	183702360	183702746	(6511809)	+	L1ME3C	LINE/L1	5701	6119	(4)	3045453
400	25.2	2.5	2.5	chr4	184832979	184833100	(5381455)	C	MER104	DNA/TcMar-Tc2	(0)	181	60	3047236
903	23.5	7.6	7.8	chr4	184833103	184833479	(5381076)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	128	3047237
1264	17.1	1.0	8.2	chr4	187414291	187414609	(2799946)	C	L1MC3	LINE/L1	(7)	7778	7483	3050943
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
23124	11.8	1.4	0.0	chr4	190108264	190111540	(103015)	C	HERVK-int	LTR/ERVK	(1208)	6328	3007	3054628
261	23.3	0.0	0.0	chr4	190111624	190111683	(102872)	C	HERVK-int	LTR/ERVK	(6716)	718	659	3054629
1729	17.1	1.4	0.3	chr4	190111667	190111959	(102596)	C	HERVK-int	LTR/ERVK	(6840)	696	401	3054629
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
2101	13.2	1.3	0.0	chr5	2534024	2534319	(179003940)	+	AluSx1	SINE/Alu	1	300	(12)	3057388
1703	24.0	7.6	6.4	chr5	2534320	2534785	(179003474)	C	MLT1H1	LTR/ERVL-MaLR	(67)	488	16	3057387
735	29.5	10.3	3.1	chr5	13933962	13934447	(167603812)	+	MLT1G1	LTR/ERVL-MaLR	47	571	(8)	3071494
275	33.9	4.6	2.4	chr5	13934508	13934634	(167603625)	C	L2c	LINE/L2	(1480)	1939	1810	3071488
254	27.2	8.9	2.1	chr5	14090951	14091044	(167447215)	+	MLT1H	LTR/ERVL-MaLR	432	532	(17)	3071767
2361	10.2	0.0	0.6	chr5	14091057	14091371	(167446888)	+	AluSq2	SINE/Alu	1	313	(0)	3071768
982	30.5	11.4	2.7	chr5	21657020	21657504	(159880755)	+	MLT1H1	LTR/ERVL-MaLR	20	552	(3)	3082305
338	21.5	14.0	8.2	chr5	23302401	23302767	(158235492)	+	MLT1H	LTR/ERVL-MaLR	152	544	(4)	3084576
745	29.4	10.3	6.8	chr5	26617021	26617531	(154920728)	+	MLT1H	LTR/ERVL-MaLR	13	543	(6)	3088764
2246	9.5	0.7	1.3	chr5	26617622	26617925	(154920334)	+	AluSc8	SINE/Alu	1	302	(9)	3088765
1062	26.2	7.7	5.8	chr5	39357742	39358223	(142180036)	+	MLT1G1	LTR/ERVL-MaLR	73	564	(15)	3107436
698	28.8	10.2	7.6	chr5	39358246	39358703	(142179556)	C	L2a	LINE/L2	(284)	3142	2686	3107435
1274	23.6	9.5	6.2	chr5	55294786	55295233	(126243026)	+	MLT1H2	LTR/ERVL-MaLR	26	489	(0)	3123021
992	26.2	30.8	1.0	chr5	56862045	56862449	(124675810)	C	MLT1H2	LTR/ERVL-MaLR	(49)	530	1	3125673
1305	23.3	10.1	1.1	chr5	61231665	61232130	(120306129)	+	MLT1H1	LTR/ERVL-MaLR	1	555	(0)	3131953
542	26.6	15.1	9.1	chr5	83360524	83360907	(98177352)	+	MLT1H	LTR/ERVL-MaLR	138	548	(1)	3165857
417	31.9	21.4	0.0	chr5	83361016	83361206	(98177053)	+	MIRb	SINE/MIR	26	268	(0)	3165858
829	20.3	0.7	0.0	chr5	83643457	83643594	(97894665)	+	MER45A	DNA/hAT-Tip100	1	139	(39)	3166218
891	15.2	0.0	0.0	chr5	83643620	83643751	(97894508)	C	FLAM_C	SINE/Alu	(11)	132	1	3166219
19	0.0	0.0	0.0	chr5	95702216	95702236	(85836023)	+	(AC)n	Simple_repeat	1	21	(0)	3181541
335	31.2	10.4	1.4	chr5	95702395	95702534	(85835725)	C	MIRb	SINE/MIR	(89)	179	26	3181542
1752	19.6	0.0	1.6	chr5	95702594	95702904	(85835355)	+	AluJr4	SINE/Alu	1	306	(6)	3181543
614	28.6	8.4	7.8	chr5	100465206	100465697	(81072562)	+	MLT1H	LTR/ERVL-MaLR	1	547	(2)	3187764
4338	12.6	1.4	2.4	chr5	106535043	106535532	(75002727)	C	L1PA13	LINE/L1	(19)	6144	5656	3195260
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
462	27.1	5.2	9.2	chr5	115355706	115356269	(66181990)	+	MLT1H2	LTR/ERVL-MaLR	1	548	(1)	3206681
394	24.0	6.7	0.0	chr5	115356292	115356416	(66181843)	C	MLT1N2	LTR/ERVL-MaLR	(25)	537	404	3206682
775	30.2	7.5	5.6	chr5	122315059	122315525	(59222734)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	73	3215738
933	25.2	8.8	1.2	chr5	126833921	126834173	(54704086)	C	MLT1H2	LTR/ERVL-MaLR	(12)	477	204	3222071
1643	12.8	0.4	0.4	chr5	126834198	126834431	(54703828)	C	AluSc	SINE/Alu	(3)	306	73	3222072
2042	25.7	4.5	4.3	chr5	133431241	133431794	(48106465)	+	MLT1H1	LTR/ERVL-MaLR	1	555	(0)	3230952
322	25.0	8.2	4.9	chr5	133431795	133431824	(48106435)	C	MER117	DNA/hAT-Charlie	(165)	32	1	3230951
12	17.2	4.9	2.3	chr5	134226811	134226851	(47311408)	+	(GCCTCGC)n	Simple_repeat	1	43	(0)	3232122
2104	20.2	7.8	0.0	chr5	136205397	136205847	(45332412)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	1	3235373
2438	21.7	6.5	0.4	chr5	137586577	137587094	(43951165)	+	MLT1H1	LTR/ERVL-MaLR	2	553	(2)	3237178
640	31.1	15.0	0.8	chr5	137587102	137587597	(43950662)	C	L2c	LINE/L2	(559)	2860	2282	3237177
1724	17.6	2.1	1.4	chr5	139593627	139593915	(41944344)	C	AluJr4	SINE/Alu	(21)	291	1	3241132
1797	16.8	0.0	1.7	chr5	151202074	151202365	(30335894)	+	AluJo	SINE/Alu	1	287	(25)	3261371
661	23.8	5.1	13.0	chr5	151202384	151202659	(30335600)	+	MER102b	DNA/hAT-Charlie	88	340	(1)	3261372
210	27.7	12.2	5.6	chr5	154392121	154392227	(27146032)	+	L2c	LINE/L2	3014	3128	(247)	3267056
292	32.6	0.0	1.1	chr5	154392278	154392367	(27145892)	+	L2c	LINE/L2	3286	3374	(13)	3267056
292	25.2	19.2	0.7	chr5	154392496	154392635	(27145624)	+	MIRc	SINE/MIR	91	262	(6)	3267057
266	28.8	4.8	0.0	chr5	158293225	158293304	(23244955)	+	MIRc	SINE/MIR	124	207	(61)	3274357
1243	25.4	5.6	6.8	chr5	158293335	158293819	(23244440)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	71	3274361
719	28.6	16.5	5.2	chr5	159547207	159547509	(21990750)	+	MLT1G	LTR/ERVL-MaLR	1	315	(264)	3276321
37	9.5	0.0	0.0	chr5	159547536	159547591	(21990668)	+	(GAGA)n	Simple_repeat	1	56	(0)	3276322
439	24.6	0.8	4.2	chr5	159547615	159547740	(21990519)	+	MLT1G	LTR/ERVL-MaLR	393	629	(51)	3276321
436	27.4	6.8	5.3	chr5	159751394	159751646	(21786613)	+	MLT1H	LTR/ERVL-MaLR	61	354	(195)	3276651
509	23.6	0.9	0.0	chr5	159751661	159751766	(21786493)	+	MLT1H	LTR/ERVL-MaLR	411	517	(32)	3276651
495	26.1	7.8	6.0	chr5	165273743	165273942	(16264317)	C	MLT1H2	LTR/ERVL-MaLR	(2)	487	284	3285098
349	32.6	7.7	2.1	chr5	165273962	165274187	(16264072)	C	MLT1H2	LTR/ERVL-MaLR	(278)	301	66	3285098
377	27.3	2.6	2.6	chr5	170059259	170059371	(11478888)	C	MIRb	SINE/MIR	(33)	235	123	3292902
402	30.4	2.5	9.8	chr5	170059493	170059747	(11478512)	+	L2a	LINE/L2	3191	3426	(0)	3292903
1647	24.1	3.1	3.7	chr5	171506316	171506771	(10031488)	C	ERV3-16A3_I-int	LTR/ERVL	(2204)	3022	2570	3295454
994	26.1	12.1	4.2	chr5	173180190	173180689	(8357570)	+	MLT1G3	LTR/ERVL-MaLR	9	595	(0)	3299103
417	16.1	8.2	5.1	chr5	173180758	173180875	(8357384)	C	L1ME4a	LINE/L1	(0)	6124	6003	3299104
276	23.9	9.8	0.0	chr5	173848921	173849012	(7689247)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	461	3300428
1141	28.8	11.6	2.0	chr5	173849068	173849549	(7688710)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	3	3300429
2091	18.4	5.8	1.8	chr5	174997908	174998356	(6539903)	C	MER110A	LTR/ERV1	(0)	468	1	3302612
465	33.3	1.0	11.1	chr5	174998357	174998409	(6539850)	C	L2a	LINE/L2	(499)	2920	2868	3302610
647	26.5	13.5	5.6	chr5	174998419	174998738	(6539521)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	201	3302613
1179	6.6	0.7	0.0	chr5	174998772	174998907	(6539352)	C	AluYa8	SINE/Alu	(19)	291	155	3302614
341	28.4	7.1	6.3	chr5	175714026	175714341	(5823918)	C	MLT1H	LTR/ERVL-MaLR	(16)	553	91	3303983
16	25.1	1.7	3.3	chr5	177134341	177134400	(4403859)	+	(GCG)n	Simple_repeat	1	61	(0)	3306743
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
233	28.8	7.5	0.0	chr5	179574936	179575046	(1963213)	C	HAL1ME	LINE/L1	(0)	2465	2346	3311121
275	24.7	9.3	1.0	chr5	179575177	179575274	(1962985)	C	MLT1G	LTR/ERVL-MaLR	(11)	478	372	3311122
851	28.4	5.7	2.5	chr5	179575255	179575693	(1962566)	C	MLT1G	LTR/ERVL-MaLR	(111)	437	1	3311122
2989	27.2	4.0	1.5	chr5	180924375	180926021	(612238)	+	L1M3b	LINE/L1	2033	3399	(4166)	3313436
1554	27.9	7.6	3.8	chr6	1495929	1496435	(169309544)	+	MLT1H1	LTR/ERVL-MaLR	28	555	(0)	3316206
2126	16.6	2.6	0.0	chr6	1496449	1496822	(169309157)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	7	3316207
469	26.6	0.0	2.4	chr6	2254681	2254807	(168551172)	+	MLT1L	LTR/ERVL-MaLR	128	251	(359)	3317181
1333	27.1	5.6	3.8	chr6	2254922	2255406	(168550573)	C	MLT1H1	LTR/ERVL-MaLR	(83)	472	13	3317182
783	26.4	11.9	1.7	chr6	2263928	2264312	(168541667)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	98	3317195
647	26.3	11.2	3.1	chr6	3714698	3715147	(167090832)	+	MLT1H2	LTR/ERVL-MaLR	6	549	(0)	3319318
766	29.6	9.8	7.5	chr6	3865209	3865782	(166940197)	+	MLT1G3	LTR/ERVL-MaLR	1	589	(6)	3319559
424	28.9	4.8	0.0	chr6	3865788	3865927	(166940052)	C	L1ME4c	LINE/L1	(549)	5575	5451	3319560
2339	9.8	0.3	0.0	chr6	3865930	3866226	(166939753)	+	AluSx4	SINE/Alu	1	298	(12)	3319561
1877	23.0	10.7	0.8	chr6	5014264	5014750	(165791229)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	9	3321360
704	26.8	10.5	13.8	chr6	6329578	6330141	(164475838)	+	MLT1G1	LTR/ERVL-MaLR	6	591	(0)	3323263
190	36.7	3.2	4.3	chr6	8269075	8269168	(162536811)	+	MamSINE1	SINE/tRNA-RTE	113	205	(85)	3326478
1129	22.2	9.3	7.2	chr6	8269176	8269398	(162536581)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	346	3326479
2189	20.4	4.4	4.0	chr6	8269399	8269899	(162536080)	+	MLT1D	LTR/ERVL-MaLR	1	503	(2)	3326480
877	35.0	4.3	3.7	chr6	18678899	18679384	(152126595)	+	MLT1H1	LTR/ERVL-MaLR	40	528	(27)	3343433
266	31.0	24.0	0.0	chr6	18679399	18679585	(152126394)	C	MamGypsy2-I	LTR/Gypsy	(182)	3984	3739	3343432
23	14.7	2.2	0.0	chr6	24720260	24720304	(146085675)	+	(GGC)n	Simple_repeat	1	46	(0)	3352413
15	13.9	0.0	2.9	chr6	24720504	24720537	(146085442)	+	A-rich	Low_complexity	1	34	(0)	3352414
524	26.3	1.1	7.4	chr6	27023610	27023798	(143782181)	+	MLT1H	LTR/ERVL-MaLR	115	291	(258)	3356159
318	26.3	4.1	7.1	chr6	27023842	27023968	(143782011)	+	MLT1H	LTR/ERVL-MaLR	421	543	(6)	3356159
2206	10.8	0.0	0.0	chr6	31200792	31201068	(139604911)	+	AluSg	SINE/Alu	2	278	(32)	3363007
21	3.7	3.6	0.0	chr6	31201078	31201105	(139604874)	+	(AT)n	Simple_repeat	1	29	(0)	3363008
338	15.2	4.3	1.5	chr6	31201106	31201172	(139604807)	C	MLT1G1	LTR/ERVL-MaLR	(57)	432	364	3363009
1018	23.7	10.1	3.5	chr6	31201144	31201576	(139604403)	C	MLT1G1	LTR/ERVL-MaLR	(100)	479	15	3363009
690	29.5	7.4	0.8	chr6	34385429	34385682	(136420297)	C	Tigger13a	DNA/TcMar-Tigger	(128)	643	370	3368260
2046	14.6	0.3	0.3	chr6	34385683	34385983	(136419996)	C	AluSz6	SINE/Alu	(11)	301	1	3368261
690	28.3	48.5	5.3	chr6	34385984	34386173	(136419806)	C	Tigger13a	DNA/TcMar-Tigger	(402)	369	97	3368260
2512	6.8	0.0	0.3	chr6	34502459	34502765	(136303214)	C	AluY	SINE/Alu	(5)	306	1	3368562
1070	24.6	4.8	13.7	chr6	34502766	34502925	(136303054)	+	MLT1H2	LTR/ERVL-MaLR	348	488	(1)	3368561
297	26.3	3.1	1.0	chr6	34502927	34503022	(136302957)	+	MER5A	DNA/hAT-Charlie	92	189	(0)	3368563
1425	14.5	0.0	2.6	chr6	34503072	34503298	(136302681)	+	AluJo	SINE/Alu	92	312	(0)	3368564
238	29.7	10.6	2.9	chr6	39194896	39194999	(131610980)	+	L2c	LINE/L2	3205	3317	(70)	3377628
391	23.3	11.8	3.6	chr6	39195083	39195561	(131610418)	+	MLT1H2	LTR/ERVL-MaLR	1	548	(0)	3377629
747	25.7	11.3	5.2	chr6	41419250	41419713	(129386266)	+	MLT1H	LTR/ERVL-MaLR	1	593	(2)	3381118
285	23.7	1.8	15.0	chr6	41419716	41419869	(129386110)	C	MIRc	SINE/MIR	(103)	165	33	3381119
1629	18.6	0.0	6.5	chr6	42519574	42519722	(128286257)	C	AluJr	SINE/Alu	(169)	143	1	3383427
1124	26.2	8.2	7.5	chr6	42519846	42520397	(128285582)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	3	3383429
1934	23.5	5.5	3.0	chr6	43459832	43460357	(127345622)	+	MLT1H	LTR/ERVL-MaLR	8	547	(2)	3385399
4584	25.5	10.8	3.1	chr6	43460404	43460563	(127345416)	+	L2a	LINE/L2	898	1052	(2367)	3385398
2686	14.4	4.4	0.5	chr6	52694089	52694527	(118111452)	+	LTR32	LTR/ERVL	1	457	(0)	3398960
727	18.6	15.3	8.3	chr6	52694528	52694635	(118111344)	+	MLT1H1	LTR/ERVL-MaLR	309	421	(68)	3398959
1820	21.5	11.3	5.2	chr6	52694816	52695220	(118110759)	+	L1MC5	LINE/L1	8028	8462	(842)	3398961
40	0.0	0.0	0.0	chr6	60651188	60651224	(110154755)	+	(T)n	Simple_repeat	1	37	(0)	3407439
710	26.1	10.1	4.9	chr6	99238915	99239387	(71566592)	+	MLT1H	LTR/ERVL-MaLR	3	541	(8)	3457298
209	21.1	3.4	1.7	chr6	99521599	99521656	(71284323)	C	MIR3	SINE/MIR	(60)	148	90	3457776
1189	23.8	8.8	11.1	chr6	107682955	107683515	(63122464)	+	MLT1H	LTR/ERVL-MaLR	3	549	(0)	3469211
468	34.2	7.2	7.6	chr6	107683518	107683817	(63122162)	+	LTR16E2	LTR/ERVL	125	427	(141)	3469212
2378	17.3	9.6	11.2	chr6	112145074	112145698	(58660281)	+	LTR18B	LTR/ERVL	1	614	(0)	3476689
484	29.9	7.6	3.8	chr6	115568821	115569084	(55236895)	+	MLT1H	LTR/ERVL-MaLR	1	275	(274)	3481441
385	23.3	11.6	5.2	chr6	115569162	115569297	(55236682)	+	MLT1H	LTR/ERVL-MaLR	367	549	(0)	3481441
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
872	29.3	3.2	6.7	chr6	124779607	124779964	(46026015)	+	MLT1H	LTR/ERVL-MaLR	203	547	(2)	3493400
693	24.8	4.5	7.2	chr6	124779969	124780246	(46025733)	+	L1ME2	LINE/L1	5782	6051	(113)	3493401
745	27.2	9.5	3.7	chr6	126373439	126373891	(44432088)	C	MLT1H2	LTR/ERVL-MaLR	(14)	535	73	3495584
1672	21.9	6.5	8.2	chr6	134779167	134779590	(36026389)	+	MLT1H	LTR/ERVL-MaLR	72	494	(55)	3507454
2281	9.9	0.3	0.0	chr6	134779591	134779884	(36026095)	C	AluSp	SINE/Alu	(15)	298	4	3507455
25	16.6	0.0	2.0	chr6	136861858	136861906	(33944073)	+	(AT)n	Simple_repeat	1	49	(0)	3510601
42	2.0	5.9	0.0	chr6	136862020	136862070	(33943909)	+	(TA)n	Simple_repeat	1	54	(0)	3510602
2007	13.4	0.0	4.6	chr6	136862072	136862377	(33943602)	C	AluSz6	SINE/Alu	(20)	292	1	3510603
250	21.3	7.6	1.6	chr6	137017163	137017224	(33788755)	+	MLT1H2	LTR/ERVL-MaLR	1	66	(482)	3510852
655	23.7	10.0	3.3	chr6	137017303	137017619	(33788360)	+	MLT1H2	LTR/ERVL-MaLR	211	555	(0)	3510852
378	14.1	6.6	0.0	chr6	138648285	138648355	(32157624)	C	MER58B	DNA/hAT-Charlie	(105)	236	161	3513278
290	25.1	4.8	6.7	chr6	138648358	138648558	(32157421)	C	MLT1G1	LTR/ERVL-MaLR	(52)	527	251	3513279
190	35.1	13.4	1.4	chr6	143203872	143204093	(27601886)	C	L2	LINE/L2	(1442)	1977	1725	3519527
1225	24.2	5.8	8.7	chr6	143204114	143204678	(27601301)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	8	3519528
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
514	37.2	7.1	5.6	chr6	143791856	143792370	(27013609)	C	L1MEd	LINE/L1	(6556)	547	25	3520424
1887	26.4	3.7	2.8	chr6	143792473	143793006	(27012973)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	17	3520427
792	27.7	15.2	3.7	chr6	148054302	148054811	(22751168)	C	MLT1G3	LTR/ERVL-MaLR	(0)	579	1	3526271
1505	19.3	6.7	6.9	chr6	150704709	150705097	(20100882)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	1	3530615
577	26.8	20.1	1.1	chr6	157029411	157029896	(13776083)	C	L2a	LINE/L2	(0)	3426	2822	3540334
1170	26.3	6.7	1.4	chr6	157030036	157030459	(13775520)	C	MLT1H	LTR/ERVL-MaLR	(43)	506	59	3540335
665	28.2	5.1	4.0	chr6	164291346	164291754	(6514225)	C	MLT1G1	LTR/ERVL-MaLR	(35)	544	93	3550580
180	15.8	0.0	5.0	chr6	169789394	169789433	(1016546)	+	MER5A	DNA/hAT-Charlie	133	170	(19)	3556857
382	27.9	6.8	3.2	chr6	170127305	170127489	(678490)	+	MLT1F	LTR/ERVL-MaLR	265	456	(93)	3557168
233	36.9	6.2	1.4	chr6	170127564	170127841	(678138)	+	L1ME4c	LINE/L1	202	493	(337)	3557171
333	27.9	2.8	6.8	chr7	102759	102955	(159243018)	+	L1MB7	LINE/L1	2498	2682	(3464)	3557959
598	30.1	10.5	1.7	chr7	575065	575531	(158770442)	C	MLT1F1	LTR/ERVL-MaLR	(39)	530	18	3558525
245	29.1	5.6	4.3	chr7	962600	962739	(158383234)	+	MLT1H2	LTR/ERVL-MaLR	343	484	(5)	3559123
1051	25.6	9.9	3.8	chr7	1402066	1402538	(157943435)	+	MLT1G1	LTR/ERVL-MaLR	7	475	(14)	3559849
368	26.1	25.8	1.5	chr7	1588792	1588945	(157757028)	C	LTR16C	LTR/ERVL	(102)	387	194	3560131
1461	21.4	4.6	1.0	chr7	1589122	1589485	(157756488)	C	MLT1H1	LTR/ERVL-MaLR	(66)	489	151	3560133
251	29.7	5.9	0.0	chr7	1729584	1729694	(157616279)	C	MLT1H1	LTR/ERVL-MaLR	(418)	137	20	3560390
337	24.6	0.8	16.3	chr7	2856961	2857101	(156488872)	+	MLT1H2	LTR/ERVL-MaLR	431	549	(0)	3562132
2055	12.5	0.7	1.3	chr7	2857103	2857407	(156488566)	C	AluSx	SINE/Alu	(9)	303	1	3562133
949	26.5	11.1	2.9	chr7	3075976	3076464	(156269509)	+	MLT1F	LTR/ERVL-MaLR	8	541	(7)	3562621
300	26.7	6.5	0.0	chr7	3076484	3076584	(156269389)	+	MER102c	DNA/hAT-Charlie	222	329	(2)	3562622
2385	23.7	3.6	0.0	chr7	3236048	3236582	(156109391)	+	MLT1H1	LTR/ERVL-MaLR	1	555	(0)	3562953
731	15.9	7.9	0.0	chr7	5437504	5437654	(153908319)	C	MER63B	DNA/hAT-Blackjack	(37)	399	236	3567028
402	27.9	5.5	2.3	chr7	5437649	5437824	(153908149)	+	MLT1F1	LTR/ERVL-MaLR	385	566	(3)	3567029
710	26.6	15.6	3.5	chr7	13715400	13715841	(145630132)	+	MLT1G1	LTR/ERVL-MaLR	1	549	(0)	3579088
439	26.1	6.3	2.2	chr7	13715848	13715984	(145629989)	+	MLT1G1-int	LTR/ERVL-MaLR	17	159	(1250)	3579088
895	16.4	6.5	3.2	chr7	22578419	22578640	(136767333)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	298	3590871
18	10.8	3.3	0.0	chr7	22578657	22578686	(136767287)	+	(CT)n	Simple_repeat	1	31	(0)	3590872
2401	22.2	6.3	3.4	chr7	24761033	24761252	(134584721)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	341	3594337
2181	15.0	1.4	3.2	chr7	24761253	24761624	(134584349)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3594338
267	29.5	1.3	2.5	chr7	28163943	28164022	(131181951)	+	MLT1H	LTR/ERVL-MaLR	81	159	(330)	3599597
401	24.5	0.0	7.0	chr7	28164180	28164293	(131181680)	+	MLT1H	LTR/ERVL-MaLR	424	529	(20)	3599597
15	11.5	7.9	0.0	chr7	28408943	28408980	(130936993)	+	(CCCCTA)n	Simple_repeat	1	41	(0)	3600023
21	3.0	0.0	7.5	chr7	28409184	28409223	(130936750)	+	(GCGGG)n	Simple_repeat	1	40	(0)	3600024
1017	27.5	8.5	8.3	chr7	36108057	36108516	(123237457)	+	MLT1H2	LTR/ERVL-MaLR	1	461	(28)	3611755
1052	23.5	10.0	8.3	chr7	36148560	36148991	(123196982)	C	MLT1H2	LTR/ERVL-MaLR	(49)	440	1	3611814
2338	19.3	4.2	4.0	chr7	36395117	36395618	(122950355)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	3612230
1248	23.0	10.4	4.2	chr7	36395619	36396032	(122949941)	C	MLT1H	LTR/ERVL-MaLR	(45)	504	16	3612229
347	28.4	8.0	17.6	chr7	38632566	38633111	(120712862)	+	MLT1H2	LTR/ERVL-MaLR	1	489	(0)	3615417
382	32.0	0.0	0.0	chr7	38633142	38633244	(120712729)	C	MER81	DNA/hAT-Blackjack	(0)	114	12	3615418
344	19.5	7.8	2.2	chr7	39259946	39261103	(120084870)	+	(AC)n	Simple_repeat	1	1248	(0)	3616275
797	25.0	4.8	1.2	chr7	39261452	39261695	(120084278)	C	MIR	SINE/MIR	(3)	259	10	3616276
1761	14.8	2.6	4.8	chr7	43929454	43929630	(115416343)	+	AluJr	SINE/Alu	128	303	(9)	3623468
793	23.7	0.6	0.0	chr7	43929638	43929814	(115416159)	+	MER45A	DNA/hAT-Tip100	1	178	(0)	3623470
326	30.9	9.3	0.0	chr7	44819483	44819618	(114526355)	+	MIR	SINE/MIR	26	175	(87)	3624955
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
3215	9.4	1.7	0.9	chr7	69126322	69126780	(90219193)	+	L1PA11	LINE/L1	5712	6174	(0)	3655974
440	28.2	16.0	7.1	chr7	69126781	69126906	(90219067)	+	MLT1H1	LTR/ERVL-MaLR	402	544	(11)	3655972
1368	21.7	11.4	2.3	chr7	73383076	73383424	(85962549)	+	MLT1H	LTR/ERVL-MaLR	165	549	(0)	3664483
1056	23.5	5.0	7.1	chr7	73383425	73383692	(85962281)	+	L1MEd	LINE/L1	1092	1375	(5711)	3664477
1035	29.4	7.0	11.6	chr7	81484132	81484758	(77861215)	+	L1M3b	LINE/L1	655	1250	(5031)	3679585
707	20.6	5.5	1.3	chr7	91338584	91338817	(68007156)	C	MLT1H2	LTR/ERVL-MaLR	(0)	555	304	3692328
261	30.5	0.6	1.8	chr7	91338914	91339076	(68006897)	C	MLT1H2	LTR/ERVL-MaLR	(323)	226	1	3692328
385	23.1	13.6	0.9	chr7	98801185	98801293	(60544680)	+	MLT1H2	LTR/ERVL-MaLR	365	489	(0)	3703433
784	31.1	8.0	4.6	chr7	101595954	101596450	(57749523)	+	MLT1G1	LTR/ERVL-MaLR	1	564	(15)	3709198
1617	12.4	1.8	8.0	chr7	101787606	101787904	(57558069)	C	AluJb	SINE/Alu	(30)	282	3	3709678
639	17.4	0.0	0.0	chr7	101787906	101788014	(57557959)	C	AluJb	SINE/Alu	(176)	136	28	3709679
2401	9.0	0.0	0.6	chr7	102618548	102618858	(56727115)	+	AluSq2	SINE/Alu	1	309	(4)	3711430
1229	18.0	6.4	1.3	chr7	102618861	102619158	(56726815)	+	L1MB2	LINE/L1	5817	6130	(41)	3711431
288	32.3	5.8	0.0	chr7	104945439	104945568	(54400405)	C	MIR3	SINE/MIR	(20)	188	51	3714875
893	27.0	11.8	7.2	chr7	110687750	110688288	(48657685)	+	MLT1G1	LTR/ERVL-MaLR	1	567	(12)	3723351
1501	28.4	7.6	1.9	chr7	113480486	113481006	(45864967)	+	MLT1H1	LTR/ERVL-MaLR	3	555	(0)	3727169
2310	24.3	8.1	4.1	chr7	113481057	113481842	(45864131)	C	L1MC4	LINE/L1	(1)	8041	7222	3727170
1283	28.2	8.5	2.0	chr7	128285889	128286394	(31059579)	C	MLT1H1	LTR/ERVL-MaLR	(13)	542	1	3746957
893	25.7	10.8	8.0	chr7	131002441	131002914	(28343059)	+	MLT1H2	LTR/ERVL-MaLR	1	489	(0)	3751950
644	26.1	15.1	2.9	chr7	140070289	140070635	(19275338)	C	L2	LINE/L2	(982)	2437	2041	3766665
1555	20.2	6.7	0.0	chr7	140070645	140070951	(19275022)	C	MLT1H2	LTR/ERVL-MaLR	(16)	473	145	3766666
706	20.4	3.3	2.0	chr7	140070963	140071112	(19274861)	C	MLT1H2-int	LTR/ERVL-MaLR	(494)	915	764	3766666
638	22.1	10.8	0.0	chr7	140283667	140283856	(19062117)	+	L2a	LINE/L2	2999	3211	(215)	3767071
890	22.3	14.1	5.1	chr7	140283924	140284358	(19061615)	+	MLT1G3	LTR/ERVL-MaLR	115	595	(0)	3767072
496	23.3	20.4	1.1	chr7	140284360	140284533	(19061440)	+	L2a	LINE/L2	3211	3426	(0)	3767071
1027	28.3	7.0	5.0	chr7	149749929	149750433	(9595540)	+	MLT1H	LTR/ERVL-MaLR	34	549	(0)	3781127
260	26.3	16.1	0.0	chr7	152519414	152519512	(6826461)	+	L2b	LINE/L2	3255	3372	(3)	3785344
2389	8.3	1.0	0.7	chr7	152519734	152520034	(6825939)	C	AluY	SINE/Alu	(8)	303	2	3785345
365	27.6	17.9	0.0	chr7	157239637	157239810	(2106163)	C	L2	LINE/L2	(1558)	1861	1650	3792110
830	19.5	0.6	9.6	chr7	157239954	157240071	(2105902)	+	MER5A	DNA/hAT-Charlie	20	137	(52)	3792112
1864	10.2	9.1	1.4	chr7	157240072	157240354	(2105619)	C	AluSz6	SINE/Alu	(5)	307	1	3792113
2394	10.3	11.7	0.5	chr7	158594718	158595097	(750876)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3793407
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
655	32.5	9.0	4.1	chr7	158971063	158971569	(374404)	+	MLT1H	LTR/ERVL-MaLR	15	548	(1)	3793965
432	26.1	9.0	1.8	chr7	158971587	158971750	(374223)	+	MER104	DNA/TcMar-Tc2	5	181	(0)	3793966
2386	4.3	1.0	0.0	chr7	159030065	159030364	(315609)	+	AluY	SINE/Alu	1	303	(8)	3794017
712	25.0	8.8	3.6	chr8	6685488	6685950	(138452686)	+	MLT1H2	LTR/ERVL-MaLR	2	537	(42)	3802441
2531	21.1	15.4	3.6	chr8	6686012	6686388	(138452248)	+	MER63C	DNA/hAT-Blackjack	8	470	(460)	3802442
3067	24.4	8.9	5.5	chr8	9749783	9750678	(135387958)	C	MLT1H-int	LTR/ERVL-MaLR	(478)	931	8	3806990
1088	23.2	10.3	4.3	chr8	9750688	9751106	(135387530)	C	MLT1H	LTR/ERVL-MaLR	(2)	487	41	3806990
892	24.1	15.5	9.7	chr8	10245414	10245927	(134892709)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	3807767
464	15.9	16.6	0.9	chr8	21511356	21511476	(123627160)	C	MLT1H2	LTR/ERVL-MaLR	(258)	321	135	3824549
609	23.8	4.5	2.9	chr8	21511559	21511731	(123626905)	+	MLT1H2	LTR/ERVL-MaLR	310	485	(4)	3824548
2219	11.9	0.7	0.0	chr8	21511774	21512068	(123626568)	+	AluSx1	SINE/Alu	1	297	(15)	3824550
924	9.4	2.5	0.0	chr8	30439899	30440015	(114698621)	+	AluJr	SINE/Alu	2	121	(191)	3839795
19	13.0	0.0	0.0	chr8	30440016	30440049	(114698587)	+	(TCAG)n	Simple_repeat	1	34	(0)	3839796
2681	15.1	13.1	5.3	chr8	30440056	30440105	(114698531)	C	L1MB2	LINE/L1	(5)	6166	6120	3839797
589	21.9	6.8	0.0	chr8	30440106	30440228	(114698408)	C	FLAM_C	SINE/Alu	(11)	132	1	3839798
2681	15.1	13.1	5.3	chr8	30440229	30440794	(114697842)	C	L1MB2	LINE/L1	(52)	6119	5486	3839797
1801	23.6	12.5	0.2	chr8	30674864	30675318	(114463318)	+	MLT1H1	LTR/ERVL-MaLR	22	540	(15)	3840174
2216	10.8	0.3	0.0	chr8	30675319	30675613	(114463023)	C	AluSq2	SINE/Alu	(17)	296	1	3840175
1613	24.5	5.4	3.2	chr8	38618103	38618575	(106520061)	+	MLT1H2	LTR/ERVL-MaLR	1	484	(5)	3852645
231	23.1	0.0	0.0	chr8	38618594	38618645	(106519991)	C	MIRc	SINE/MIR	(121)	147	96	3852644
309	31.9	6.6	3.5	chr8	52319179	52319575	(92819061)	C	L1M5	LINE/L1	(3388)	2758	2349	3867981
1065	24.8	6.5	3.3	chr8	52319591	52320104	(92818532)	C	MLT1G	LTR/ERVL-MaLR	(4)	565	4	3867983
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
1485	28.3	1.5	2.6	chr8	57214477	57215085	(87923551)	C	MER50	LTR/ERV1	(123)	611	10	3874995
48	0.0	0.0	0.0	chr8	58423080	58423122	(86715514)	+	(ATC)n	Simple_repeat	1	43	(0)	3876566
267	26.3	11.8	6.9	chr8	58423123	58423424	(86715212)	+	MLT1H	LTR/ERVL-MaLR	154	478	(71)	3876567
2618	6.5	0.0	0.0	chr8	58423425	58423734	(86714902)	C	AluY	SINE/Alu	(1)	310	1	3876568
864	28.4	9.0	9.0	chr8	79255700	79256167	(65882469)	+	MLT1H2	LTR/ERVL-MaLR	22	489	(0)	3905732
18	17.0	4.3	0.0	chr8	80868128	80868173	(64270463)	+	(TTTG)n	Simple_repeat	1	48	(0)	3908482
9953	10.6	0.1	0.7	chr8	85742400	85743923	(59394713)	C	L1P1	LINE/L1	(2125)	4021	2507	3914963
364	27.1	6.3	0.8	chr8	86348543	86348661	(58789975)	C	L2a	LINE/L2	(1)	3425	3300	3915929
481	23.1	9.9	7.5	chr8	86348796	86349030	(58789606)	C	MLT1H	LTR/ERVL-MaLR	(0)	560	173	3915930
2335	9.0	1.0	0.0	chr8	86349031	86349318	(58789318)	C	AluSx	SINE/Alu	(21)	291	1	3915931
2576	23.7	5.3	1.3	chr8	93524162	93524906	(51613730)	C	ERV3-16A3_I-int	LTR/ERVL	(1270)	3956	3181	3925339
3005	24.3	3.6	4.3	chr8	93524934	93525971	(51612665)	C	ERV3-16A3_I-int	LTR/ERVL	(2247)	2979	1950	3925339
2125	23.0	4.2	0.4	chr8	100890979	100891463	(44247173)	+	MLT1H1	LTR/ERVL-MaLR	1	504	(51)	3937735
6469	8.8	3.0	19.2	chr8	100891476	100893344	(44245292)	C	SVA_D	Retroposon/SVA	(1)	1385	221	3937736
949	22.9	8.8	1.6	chr8	102723780	102724032	(42414604)	+	MLT1H	LTR/ERVL-MaLR	218	490	(59)	3940980
1239	18.8	0.9	0.9	chr8	102724036	102724253	(42414383)	+	AluJr	SINE/Alu	4	221	(91)	3940981
896	13.0	0.8	0.0	chr8	106659136	106659258	(38479378)	C	AluJr	SINE/Alu	(188)	124	1	3946884
402	27.3	10.3	1.7	chr8	122016471	122016688	(23121948)	C	MLT1H	LTR/ERVL-MaLR	(6)	483	276	3969234
526	24.1	6.6	0.1	chr8	122016730	122016890	(23121746)	C	MLT1H	LTR/ERVL-MaLR	(327)	222	9	3969234
2127	23.1	5.9	2.5	chr8	122732643	122733165	(22405471)	+	MLT1H	LTR/ERVL-MaLR	8	549	(0)	3970428
220	28.2	0.0	14.1	chr8	122733169	122733296	(22405340)	+	MIRb	SINE/MIR	115	224	(44)	3970429
1573	18.9	3.6	2.4	chr8	123054131	123054428	(22084208)	+	MLT1H2	LTR/ERVL-MaLR	185	486	(3)	3971063
554	25.8	1.6	4.7	chr8	123585180	123585370	(21553266)	C	LTR103b_Mam	LTR/ERV1?	(78)	470	286	3972183
595	28.4	9.4	2.8	chr8	128055298	128055514	(17083122)	+	MIRb	SINE/MIR	33	265	(3)	3980695
825	24.2	10.9	4.9	chr8	128055552	128055956	(17082680)	C	MLT1H2	LTR/ERVL-MaLR	(0)	549	79	3980696
978	24.5	18.8	2.4	chr8	133167519	133167978	(11970658)	C	MLT1H1	LTR/ERVL-MaLR	(2)	553	1	3989900
419	27.2	6.4	3.8	chr8	133367303	133367523	(11771113)	C	L2a	LINE/L2	(13)	3362	3185	3990301
645	25.4	11.6	7.1	chr8	133367524	133367987	(11770649)	C	MLT1H2	LTR/ERVL-MaLR	(1)	554	32	3990302
418	24.5	7.7	9.1	chr8	135281519	135281781	(9856855)	C	MLT1G1	LTR/ERVL-MaLR	(42)	537	197	3993754
656	26.6	20.4	1.3	chr8	138366745	138367153	(6771483)	+	MLT1H	LTR/ERVL-MaLR	4	547	(2)	3998571
820	23.2	7.8	10.8	chr8	141471311	141471358	(3667278)	+	MER96B	DNA/hAT-Tip100	57	99	(318)	4003676
2664	5.2	0.0	0.0	chr8	141471359	141471667	(3666969)	+	AluY	SINE/Alu	1	309	(2)	4003677
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
14	18.8	2.2	4.3	chr9	228445	228490	(138166227)	+	(TTTATA)n	Simple_repeat	1	47	(0)	4008825
601	22.7	1.4	2.1	chr9	228567	228710	(138166007)	+	MLT1C	LTR/ERVL-MaLR	321	463	(4)	4008826
1200	26.3	3.7	5.0	chr9	228708	229194	(138165523)	C	MLT1H	LTR/ERVL-MaLR	(23)	526	1	4008827
491	31.8	3.5	2.5	chr9	13317901	13318097	(125076620)	C	MLT1I	LTR/ERVL-MaLR	(122)	289	91	4027460
588	27.9	0.6	3.9	chr9	13318146	13318324	(125076393)	C	MLT1H2	LTR/ERVL-MaLR	(32)	457	285	4027461
1317	27.8	9.7	0.5	chr9	13318375	13318992	(125075725)	+	HAL1	LINE/L1	1130	1810	(697)	4027455
1370	21.9	5.0	2.6	chr9	19533358	19533815	(118860902)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	4036512
1787	17.6	0.7	2.9	chr9	38207000	38207312	(100187405)	C	AluJb	SINE/Alu	(6)	306	1	4064152
2050	23.1	5.7	1.9	chr9	38207331	38207856	(100186861)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	1	4064153
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
1251	23.7	10.2	10.6	chr9	72102307	72102797	(66291920)	+	MLT1H2	LTR/ERVL-MaLR	1	489	(0)	4085857
311	24.4	2.5	4.9	chr9	72102994	72103075	(66291642)	C	HAL1	LINE/L1	(720)	1787	1708	4085858
681	19.1	5.5	3.4	chr9	74975304	74975563	(63419154)	+	L1MC4a	LINE/L1	7660	7839	(43)	4090303
390	16.9	3.5	0.9	chr9	74975564	74975650	(63419067)	+	LTR40b	LTR/ERVL	368	465	(0)	4090304
633	27.6	5.8	0.0	chr9	74975894	74976103	(63418614)	+	HERVL40-int	LTR/ERVL	924	1146	(4384)	4090305
257	22.7	7.6	4.0	chr9	77010434	77010534	(61384183)	C	Tigger16a	DNA/TcMar-Tigger	(91)	866	762	4093550
542	25.8	10.1	3.3	chr9	77010558	77010810	(61383907)	C	MLT1H2	LTR/ERVL-MaLR	(0)	569	302	4093551
23	25.9	1.5	1.5	chr9	77010825	77010890	(61383827)	+	(TC)n	Simple_repeat	1	67	(0)	4093552
1051	26.6	7.6	8.6	chr9	78326648	78326955	(60067762)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	246	4095603
2281	10.5	0.0	2.3	chr9	78326956	78327260	(60067457)	C	AluSg	SINE/Alu	(12)	298	1	4095604
1077	31.5	3.8	3.8	chr9	78890522	78890833	(59503884)	+	MLT1H1	LTR/ERVL-MaLR	183	496	(59)	4096414
2560	5.5	0.0	1.9	chr9	78890834	78891140	(59503577)	C	AluY	SINE/Alu	(10)	301	1	4096415
1598	28.1	6.6	1.2	chr9	80059996	80060507	(58334210)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	8	4098132
2364	10.9	0.0	0.3	chr9	83064785	83065097	(55329620)	+	AluSx1	SINE/Alu	1	312	(0)	4102321
928	26.4	10.9	7.7	chr9	83065183	83065650	(55329067)	C	MLT1H2	LTR/ERVL-MaLR	(4)	485	1	4102322
267	35.0	6.4	4.8	chr9	83382643	83382978	(55011739)	+	L2	LINE/L2	2154	2495	(924)	4102803
1400	23.4	4.3	3.7	chr9	83383013	83383362	(55011355)	+	MLT1H1	LTR/ERVL-MaLR	203	554	(1)	4102804
394	20.3	23.8	5.1	chr9	91028342	91028595	(47366122)	+	MLT1G3	LTR/ERVL-MaLR	4	323	(256)	4114594
349	22.6	1.2	0.0	chr9	91028655	91028738	(47365979)	+	MLT1G3	LTR/ERVL-MaLR	392	476	(72)	4114594
475	25.5	10.7	12.5	chr9	91150659	91150939	(47243778)	+	MLT1H2	LTR/ERVL-MaLR	227	488	(1)	4114787
17	12.8	2.9	0.0	chr9	91150989	91151022	(47243695)	+	(ACAA)n	Simple_repeat	1	35	(0)	4114792
349	27.2	16.7	4.2	chr9	91960254	91960413	(46434304)	+	L1M5	LINE/L1	5440	5637	(557)	4115984
493	24.2	12.2	1.6	chr9	91960464	91960657	(46434060)	C	MLT1H2	LTR/ERVL-MaLR	(0)	555	322	4115986
2354	9.3	0.0	0.0	chr9	91960802	91961102	(46433615)	C	AluSx3	SINE/Alu	(6)	305	5	4115987
387	31.5	5.0	5.2	chr9	94161436	94161739	(44232978)	C	L2a	LINE/L2	(9)	3417	3061	4119114
1776	24.8	9.0	4.3	chr9	96190049	96190557	(42204160)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	21	4122385
2534	7.8	0.0	0.0	chr9	126045494	126045801	(12348916)	+	AluY	SINE/Alu	1	308	(3)	4175751
935	13.2	1.1	8.9	chr9	126045802	126045923	(12348794)	C	MLT1H	LTR/ERVL-MaLR	(59)	490	374	4175750
2102	20.1	12.4	0.0	chr9	126045964	126046416	(12348301)	C	LTR53	LTR/ERVL	(2)	517	1	4175752
212	34.1	3.6	4.3	chr9	129139771	129139911	(9254806)	+	MIR3	SINE/MIR	1	140	(68)	4182167
881	18.2	0.0	0.0	chr9	129355440	129355576	(9039141)	C	FRAM	SINE/Alu	(39)	137	1	4182632
495	26.2	12.6	6.6	chr9	129355741	129356014	(9038703)	C	MLT1G	LTR/ERVL-MaLR	(5)	484	192	4182633
578	25.4	3.0	0.8	chr9	129356029	129356159	(9038558)	C	MLT1G	LTR/ERVL-MaLR	(457)	134	1	4182633
1248	28.5	5.3	5.0	chr9	129370462	129370829	(9023888)	C	L1MEd	LINE/L1	(5304)	2659	2090	4182668
245	28.3	2.1	3.2	chr9	129370835	129370929	(9023788)	+	MIR	SINE/MIR	13	106	(156)	4182671
508	23.5	6.1	5.8	chr9	129370933	129371031	(9023686)	C	MLT1H	LTR/ERVL-MaLR	(78)	501	376	4182672
1483	17.3	9.5	10.9	chr9	129371032	129371097	(9023620)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	325	4182673
1915	14.6	0.0	1.7	chr9	129371098	129371385	(9023332)	+	AluJb	SINE/Alu	2	284	(28)	4182674
686	26.5	16.1	3.3	chr9	133260155	133260602	(5134115)	+	MLT1G1	LTR/ERVL-MaLR	2	578	(1)	4190312
361	32.2	26.4	2.8	chr9	133260603	133261044	(5133673)	C	L2c	LINE/L2	(279)	3108	2561	4190313
6181	5.3	0.0	0.7	chr9	134986256	134987009	(3407708)	+	L1PA5	LINE/L1	5406	6154	(0)	4192628
656	28.5	12.0	4.8	chr9	134987010	134987233	(3407484)	+	MLT1H	LTR/ERVL-MaLR	278	499	(50)	4192627
2973	25.9	6.8	2.8	chr9	135453910	135454811	(2939906)	C	MLT1H-int	LTR/ERVL-MaLR	(468)	941	1	4193253
839	20.5	11.8	2.9	chr9	135454812	135455057	(2939660)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	279	4193253
236	31.4	6.2	2.8	chr9	135455072	135455179	(2939538)	+	MLT1M	LTR/ERVL-MaLR	131	242	(430)	4193254
269	24.7	17.0	0.0	chr9	136213661	136213753	(2180964)	+	MLT1H	LTR/ERVL-MaLR	33	144	(411)	4194154
557	22.5	2.4	3.3	chr9	136213865	136214034	(2180683)	+	MLT1H	LTR/ERVL-MaLR	322	544	(5)	4194154
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
2204	9.5	0.7	0.0	chr9	137600539	137600821	(793896)	+	AluSx1	SINE/Alu	1	285	(27)	4195853
45	0.0	0.0	0.0	chr9	137600822	137600862	(793855)	+	(AAT)n	Simple_repeat	1	41	(0)	4195854
473	12.7	4.1	10.6	chr9	137600863	137600952	(793765)	C	MLT1H2	LTR/ERVL-MaLR	(29)	460	368	4195847
2321	10.8	0.0	2.5	chr9	137601031	137601209	(793508)	C	AluSc	SINE/Alu	(1)	308	135	4195855
207	25.5	9.7	6.3	chr9	137669558	137669716	(725001)	+	L2	LINE/L2	1660	1824	(1595)	4195998
586	26.2	7.5	6.9	chrX	3572085	3572387	(152468508)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	243	4365108
451	15.1	0.0	0.0	chrX	3838792	3838864	(152202031)	C	tRNA-Ile-ATC	tRNA	(4)	73	1	4365701
1285	26.7	7.9	2.4	chrX	3951964	3952455	(152088440)	C	MLT1H	LTR/ERVL-MaLR	(21)	528	8	4365923
699	25.2	1.2	0.6	chrX	9388624	9388783	(146652112)	+	MLT1H	LTR/ERVL-MaLR	386	546	(3)	4374690
833	25.2	6.5	10.9	chrX	11889581	11890124	(144150771)	C	MLT1H2	LTR/ERVL-MaLR	(5)	550	1	4378721
495	22.9	8.6	2.3	chrX	15332849	15333022	(140707873)	+	MLT1H2	LTR/ERVL-MaLR	304	489	(0)	4384192
788	19.6	8.9	0.0	chrX	15333047	15333219	(140707676)	+	MER58A	DNA/hAT-Charlie	35	224	(0)	4384193
499	19.2	1.9	3.8	chrX	16408687	16408830	(139632065)	+	MLT1H	LTR/ERVL-MaLR	303	503	(46)	4385956
1152	30.7	1.1	0.3	chrX	16408912	16409287	(139631608)	+	BLACKJACK	DNA/hAT-Blackjack	22	400	(2569)	4385959
986	24.4	7.5	4.2	chrX	19089581	19089955	(136950940)	+	MLT1H	LTR/ERVL-MaLR	127	549	(0)	4390692
15	27.6	2.5	4.9	chrX	19089956	19090034	(136950861)	+	(CCTT)n	Simple_repeat	1	81	(0)	4390693
1197	25.2	10.4	6.5	chrX	21811899	21812441	(134228454)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	13	4394964
997	19.9	8.2	5.3	chrX	22148014	22148341	(133892554)	C	MLT1H2	LTR/ERVL-MaLR	(0)	549	185	4395574
2427	13.7	2.7	2.7	chrX	22148353	22148766	(133892129)	C	L1MA7	LINE/L1	(9)	6282	5869	4395575
2473	8.2	0.0	0.0	chrX	23697945	23698249	(132342646)	+	AluSx1	SINE/Alu	1	305	(7)	4397839
552	21.4	0.0	0.9	chrX	23698300	23698412	(132342483)	+	MLT1H2	LTR/ERVL-MaLR	298	409	(80)	4397840
16	0.0	0.0	0.0	chrX	24054531	24054548	(131986347)	+	(A)n	Simple_repeat	1	18	(0)	4398696
740	21.7	11.4	9.7	chrX	25086301	25086365	(130954530)	C	MLT1H2	LTR/ERVL-MaLR	(6)	483	415	4400601
31	3.0	0.0	0.0	chrX	25086366	25086399	(130954496)	+	(T)n	Simple_repeat	1	34	(0)	4400602
740	21.7	11.4	9.7	chrX	25086400	25086798	(130954097)	C	MLT1H2	LTR/ERVL-MaLR	(75)	414	10	4400601
205	30.0	1.6	1.6	chrX	29838646	29838706	(126202189)	+	MIRb	SINE/MIR	28	88	(180)	4407375
942	28.8	6.7	5.0	chrX	29838711	29839176	(126201719)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	4407376
856	23.4	13.0	4.4	chrX	39466574	39467059	(116573836)	+	MLT1G1	LTR/ERVL-MaLR	1	548	(0)	4420580
1046	22.8	4.0	0.0	chrX	39573995	39574231	(116466664)	+	MLT1G1	LTR/ERVL-MaLR	333	579	(0)	4420767
1410	23.3	8.8	5.7	chrX	39682854	39683326	(116357569)	+	MLT1H2	LTR/ERVL-MaLR	1	489	(0)	4420973
686	18.0	0.0	0.0	chrX	39829568	39829678	(116211217)	C	AluJr	SINE/Alu	(66)	246	136	4421269
873	25.9	10.8	7.8	chrX	39829680	39830153	(116210742)	C	MLT1H	LTR/ERVL-MaLR	(57)	492	3	4421270
1880	26.1	6.8	2.9	chrX	39913436	39913956	(116126939)	C	MLT1H1	LTR/ERVL-MaLR	(3)	552	10	4421425
1363	25.8	7.8	8.1	chrX	40285594	40286174	(115754721)	+	MLT1G1	LTR/ERVL-MaLR	1	579	(0)	4422152
1065	26.4	8.9	4.5	chrX	40389644	40390091	(115650804)	+	MLT1H	LTR/ERVL-MaLR	58	527	(22)	4422364
2384	25.5	7.2	4.2	chrX	40390113	40390364	(115650531)	C	MLT1G1-int	LTR/ERVL-MaLR	(131)	1256	1004	4422363
1957	24.1	6.5	2.8	chrX	40479740	40480273	(115560622)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	1	4422541
1178	29.9	9.6	4.6	chrX	40495450	40495971	(115544924)	+	MLT1H1	LTR/ERVL-MaLR	5	555	(0)	4422580
462	28.0	13.8	6.3	chrX	40495972	40495982	(115544913)	C	MLT1K	LTR/ERVL-MaLR	(506)	89	80	4422579
2151	13.4	3.3	3.5	chrX	40495983	40496139	(115544756)	+	MLT1A1	LTR/ERVL-MaLR	1	151	(257)	4422581
516	29.9	9.8	2.9	chrX	40963922	40964159	(115076736)	+	MIRb	SINE/MIR	3	258	(10)	4423388
1091	23.9	12.6	5.4	chrX	40964194	40964623	(115076272)	C	MLT1H1	LTR/ERVL-MaLR	(108)	447	1	4423389
553	26.4	7.3	7.5	chrX	42665940	42666452	(113374443)	+	MLT1H2	LTR/ERVL-MaLR	10	527	(22)	4426278
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
1346	27.0	6.6	6.6	chrX	44711071	44711129	(111329766)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	536	4429541
2293	11.1	0.0	0.0	chrX	44711130	44711427	(111329468)	+	AluSx	SINE/Alu	2	299	(13)	4429542
1346	27.0	6.6	6.6	chrX	44711428	44711958	(111328937)	C	MLT1G	LTR/ERVL-MaLR	(56)	535	1	4429541
27	27.0	2.2	2.1	chrX	48918331	48918422	(107122473)	+	(AC)n	Simple_repeat	1	94	(0)	4437090
239	10.3	2.5	0.0	chrX	72330117	72330155	(83710740)	+	L1MB7	LINE/L1	6145	6184	(0)	4463162
828	22.8	7.9	2.9	chrX	72330172	72330446	(83710449)	+	MLT1H	LTR/ERVL-MaLR	216	505	(44)	4463163
446	23.8	5.4	0.0	chrX	72330785	72330889	(83710006)	+	L2b	LINE/L2	3264	3374	(1)	4463164
2817	15.6	0.8	2.0	chrX	93190594	93191091	(62849804)	+	L1PB1	LINE/L1	634	1125	(5738)	4485330
727	21.8	2.5	11.1	chrX	124320142	124320358	(31720537)	C	L1ME3	LINE/L1	(7)	6155	5958	4528492
1160	24.7	10.5	4.0	chrX	124320359	124320827	(31720068)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	9	4528493
1547	20.2	11.1	0.3	chrX	124320844	124321196	(31719699)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	4528494
1684	23.9	10.4	4.4	chrX	134520972	134521429	(21519466)	+	MLT1H1	LTR/ERVL-MaLR	19	525	(30)	4542867
2306	9.2	1.3	0.3	chrX	134521430	134521732	(21519163)	C	AluSg	SINE/Alu	(3)	307	2	4542870
284	26.8	1.4	0.0	chrX	134985449	134985519	(21055376)	C	ERVL-E-int	LTR/ERVL	(4097)	1570	1499	4543768
900	27.4	13.5	1.8	chrX	134985551	134985947	(21054948)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	97	4543775
1113	25.6	9.7	2.5	chrX	137909673	137910113	(18130782)	+	MLT1H	LTR/ERVL-MaLR	74	549	(0)	4548598
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
302	22.5	1.0	1.0	chrY	10930456	10930536	(46296879)	C	FRAM	SINE/Alu	(30)	136	89	4588462
6112	24.5	0.6	0.4	chrY	10930536	10932066	(46295349)	+	(TTCCA)n	Simple_repeat	4	1537	(0)	4588463
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
388	20.6	0.0	0.0	chrY	11006516	11006583	(46220832)	C	AluYj4	SINE/Alu	(20)	291	224	4588669
259	17.8	0.0	4.3	chrY	11006543	11006589	(46220826)	+	SVA_C	Retroposon/SVA	336	380	(1004)	4588670
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057