2198	11.0	0.7	1.3	chr1	1016061	1016360	(247940062)	C	AluSx1	SINE/Alu	(14)	298	1	1282
1063	10.4	0.0	0.0	chr1	1016361	1016495	(247939927)	C	AluSz	SINE/Alu	(176)	136	2	1283
33	21.2	2.9	6.4	chr1	1909165	1909300	(247047122)	+	G-rich	Low_complexity	1	140	(0)	2604
1997	9.9	2.5	1.1	chr1	2120323	2120595	(246835827)	C	AluSq2	SINE/Alu	(36)	277	1	2901
586	30.6	13.4	3.5	chr1	2120596	2120836	(246835586)	C	L1MEg	LINE/L1	(5020)	1222	948	2893
236	34.4	10.3	0.8	chr1	3678750	3678881	(245277541)	+	MER5A	DNA/hAT-Charlie	44	189	(0)	4229
2221	10.3	0.0	1.3	chr1	6561430	6561729	(242394693)	+	AluYh3	SINE/Alu	1	296	(15)	8473
6639	25.1	0.4	1.8	chr1	6561730	6561831	(242394591)	C	HERVFH21-int	LTR/ERV1	(551)	7885	7790	8471
2472	11.3	25.7	0.4	chr1	6561832	6562169	(242394253)	C	LTR14B	LTR/ERVK	(1)	607	115	8474
1520	20.4	1.5	0.4	chr1	6682646	6682915	(242273507)	+	AluJb	SINE/Alu	1	273	(39)	8666
2398	9.5	0.3	0.0	chr1	9010346	9010651	(239945771)	C	AluSq	SINE/Alu	(0)	313	7	12745
2341	11.0	0.0	0.7	chr1	9189071	9189379	(239767043)	+	AluSz	SINE/Alu	1	307	(5)	13121
2177	14.7	0.0	0.0	chr1	9764359	9764664	(239191758)	+	AluSz	SINE/Alu	5	310	(2)	14322
2258	14.2	2.5	10.2	chr1	9764665	9764709	(239191713)	C	MSTB1	LTR/ERVL-MaLR	(393)	39	1	14320
37	36.6	2.0	7.0	chr1	11337340	11337516	(237618906)	+	(AT)n	Simple_repeat	192	413	(0)	17483
2803	4.7	0.0	0.6	chr1	13659235	13659577	(235296845)	+	LTR14A	LTR/ERVK	4	344	(0)	21829
281	24.3	11.2	7.6	chr1	13728203	13728378	(235228044)	C	L2b	LINE/L2	(48)	3378	3206	21957
254	31.7	2.9	1.9	chr1	15421930	15422032	(233534390)	C	MIRb	SINE/MIR	(10)	258	155	25215
767	20.3	4.7	11.4	chr1	15422037	15422085	(233534337)	C	MER20	DNA/hAT-Charlie	(0)	219	172	25216
22	14.5	3.5	3.4	chr1	16187769	16187825	(232768597)	+	(CCCTGC)n	Simple_repeat	1	59	(0)	26888
24	22.9	0.0	0.0	chr1	16188005	16188060	(232768362)	+	(ATG)n	Simple_repeat	1	56	(0)	26889
510	34.9	4.5	1.0	chr1	16188109	16188290	(232768132)	+	MIRb	SINE/MIR	17	205	(63)	26890
237	20.0	3.9	0.0	chr1	16207348	16207397	(232749025)	C	L2c	LINE/L2	(0)	3387	3336	26930
1535	0.0	0.0	0.0	chr1	16514122	16514285	(232442137)	C	U1	snRNA	(1)	164	1	27677
320	32.9	4.7	1.4	chr1	17212600	17212744	(231743678)	+	L3	LINE/CR1	3849	3998	(101)	28927
307	19.4	6.5	2.7	chr1	17213110	17213183	(231743239)	+	MIRc	SINE/MIR	78	154	(114)	28928
2779	4.4	0.0	6.3	chr1	17301715	17302081	(231654341)	+	LTR14A	LTR/ERVK	1	344	(0)	29119
1725	13.8	2.0	1.7	chr1	17302088	17302381	(231654041)	+	MSTA	LTR/ERVL-MaLR	134	428	(0)	29120
292	35.3	5.7	1.5	chr1	20324137	20324271	(228632151)	C	L2b	LINE/L2	(20)	3355	3215	35524
473	24.2	10.5	1.4	chr1	20404260	20404409	(228552013)	C	L2a	LINE/L2	(0)	3426	3204	35705
1316	25.2	7.8	6.5	chr1	20561640	20562106	(228394316)	+	MLT1K	LTR/ERVL-MaLR	48	533	(62)	36051
2247	10.2	0.0	1.0	chr1	20562107	20562401	(228394021)	+	AluSx3	SINE/Alu	1	292	(19)	36052
430	26.1	6.8	3.0	chr1	21288754	21288963	(227667459)	+	MIRb	SINE/MIR	16	221	(41)	37579
568	23.1	2.2	0.7	chr1	21354974	21355108	(227601314)	C	MIRb	SINE/MIR	(111)	157	21	37743
245	22.9	0.0	12.5	chr1	21355205	21355246	(227601176)	+	MIR3	SINE/MIR	85	124	(84)	37744
1820	15.6	2.1	1.0	chr1	21355247	21355564	(227600858)	C	AluJb	SINE/Alu	(0)	312	6	37745
2136	20.0	14.3	1.6	chr1	22787757	22788201	(226168221)	C	MLT1F2	LTR/ERVL-MaLR	(63)	497	1	40937
232	32.1	6.4	4.4	chr1	23013680	23013816	(225942606)	C	MIR1_Amn	SINE/MIR	(90)	140	1	41456
318	28.0	0.0	3.6	chr1	23014196	23014306	(225942116)	C	MIRb	SINE/MIR	(0)	268	162	41457
1127	30.2	12.5	2.3	chr1	23476378	23476835	(225479587)	+	L2b	LINE/L2	2555	3075	(344)	42509
1875	14.5	2.3	1.0	chr1	24813721	24814016	(224142406)	C	AluJb	SINE/Alu	(12)	300	1	45804
746	26.8	5.9	1.3	chr1	25997358	25997584	(222958838)	C	MIRc	SINE/MIR	(1)	267	30	48307
321	29.8	11.9	1.1	chr1	26023723	26023912	(222932510)	C	MIRb	SINE/MIR	(16)	252	32	48377
201	32.4	4.2	0.0	chr1	26024037	26024104	(222932318)	+	L3b	LINE/CR1	4975	5045	(187)	48378
239	29.7	12.8	0.3	chr1	26922336	26922456	(222033966)	+	MIRc	SINE/MIR	13	149	(81)	50463
219	29.8	5.0	0.0	chr1	27489499	27489592	(221466830)	C	MIR3	SINE/MIR	(25)	183	85	51852
441	18.6	1.1	1.1	chr1	27489639	27489725	(221466697)	C	MIR3	SINE/MIR	(61)	147	61	51853
13	21.7	0.0	2.6	chr1	27551917	27551955	(221404467)	+	(GGCGTG)n	Simple_repeat	1	39	(0)	52015
314	22.1	17.5	4.6	chr1	28144893	28145046	(220811376)	+	MIR3	SINE/MIR	20	205	(3)	53366
447	12.7	6.6	0.0	chr1	28412957	28413027	(220543395)	+	MER1B	DNA/hAT-Charlie	57	132	(207)	54136
725	6.9	2.9	0.0	chr1	28413031	28413132	(220543290)	+	MER1B	DNA/hAT-Charlie	235	339	(0)	54137
398	24.5	11.5	2.8	chr1	28805789	28805931	(220150491)	C	MIR	SINE/MIR	(93)	169	13	55187
640	29.8	3.2	3.2	chr1	28806092	28806162	(220150260)	C	L2	LINE/L2	(648)	2771	2701	55188
2016	12.2	0.0	0.0	chr1	28806163	28806448	(220149974)	+	AluSx	SINE/Alu	21	306	(6)	55189
622	26.4	3.5	1.0	chr1	29156443	29156637	(219799785)	C	MIR	SINE/MIR	(32)	230	31	56046
3654	9.9	0.4	5.2	chr1	29156731	29157306	(219799116)	C	LTR14	LTR/ERVK	(0)	548	1	56047
2021	13.2	0.7	1.9	chr1	29680475	29680784	(219275638)	C	AluSp	SINE/Alu	(7)	306	1	57078
542	30.6	5.7	10.0	chr1	29707856	29708334	(219248088)	+	L2b	LINE/L2	2919	3375	(0)	57130
8085	7.3	1.0	0.0	chr1	30155101	30157037	(218799385)	C	L1PA7	LINE/L1	(5)	6149	4196	57944
258	3.0	0.0	0.0	chr1	30157039	30157071	(218799351)	+	L1PA7	LINE/L1	4125	4157	(1989)	57944
20	3.7	0.0	0.0	chr1	30157204	30157231	(218799191)	+	(AAAC)n	Simple_repeat	1	28	(0)	57945
588	33.2	8.1	1.8	chr1	30157473	30158017	(218798405)	+	L1ME3G	LINE/L1	5341	5809	(315)	57946
4113	18.3	1.3	5.0	chr1	30206636	30207933	(218748489)	+	HERVH-int	LTR/ERV1	3357	4719	(1935)	58024
1684	13.0	0.0	0.0	chr1	30207924	30208184	(218748238)	+	HERVH-int	LTR/ERV1	5756	6016	(1697)	58024
3959	10.4	0.3	5.2	chr1	30481517	30482153	(218474269)	+	LTR14B	LTR/ERVK	3	608	(0)	58483
214	34.5	5.1	4.5	chr1	30482154	30482268	(218474154)	+	L2b	LINE/L2	3203	3320	(55)	58484
2370	18.3	5.9	0.0	chr1	30482269	30482711	(218473711)	+	MER70A	LTR/ERVL	2	472	(0)	58485
189	30.6	5.9	2.6	chr1	31152305	31152418	(217804004)	+	L2a	LINE/L2	2916	3033	(393)	59964
816	21.2	16.7	1.1	chr1	31152483	31152744	(217803678)	C	MLT1K	LTR/ERVL-MaLR	(281)	314	4	59968
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
518	26.8	2.9	10.5	chr1	31541650	31541907	(217414515)	+	L2b	LINE/L2	2972	3209	(166)	60875
3193	8.0	0.2	0.2	chr1	31816327	31816779	(217139643)	C	L1PREC2	LINE/L1	(2)	6158	5706	61366
718	16.2	1.3	1.3	chr1	32401810	32401885	(216554537)	+	MER63D	DNA/hAT-Blackjack	138	213	(848)	62794
14	27.3	0.0	3.6	chr1	33181241	33181328	(215775094)	+	G-rich	Low_complexity	1	84	(0)	64626
1712	6.3	0.5	0.0	chr1	33612683	33612888	(215343534)	C	AluY	SINE/Alu	(13)	298	92	65390
26889	14.4	4.6	2.4	chr1	35132579	35137611	(213818811)	C	HERVH-int	LTR/ERV1	(2564)	5149	1	68105
311	29.7	10.4	2.5	chr1	35640283	35640441	(213315981)	C	MIR	SINE/MIR	(26)	236	64	69123
2092	10.1	1.0	0.3	chr1	35640928	35641213	(213315209)	+	AluSp	SINE/Alu	20	307	(6)	69124
290	28.4	0.0	0.0	chr1	36112393	36112466	(212843956)	C	MER91A	DNA/hAT-Tip100	(121)	75	2	70156
196	30.0	0.0	0.0	chr1	36112583	36112642	(212843780)	+	L2b	LINE/L2	3309	3368	(7)	70157
396	30.3	0.7	7.7	chr1	36112739	36112906	(212843516)	C	MER5A1	DNA/hAT-Charlie	(0)	166	11	70158
1440	26.8	8.3	3.0	chr1	36317958	36318484	(212637938)	C	L2	LINE/L2	(616)	2803	2247	70639
1231	35.1	8.7	4.2	chr1	38587005	38587444	(210368978)	C	MamGyp-int	LTR/Gypsy	(1858)	3245	2789	74962
2046	15.6	0.3	0.0	chr1	38587445	38587751	(210368671)	+	AluJb	SINE/Alu	1	308	(4)	74963
194	29.1	11.9	4.7	chr1	40981115	40981262	(207975160)	+	L2b	LINE/L2	3214	3373	(2)	79993
509	33.7	2.2	0.6	chr1	41476606	41476784	(207479638)	C	MER115	DNA/hAT-Tip100	(503)	190	9	80885
13	17.4	5.3	5.0	chr1	42334856	42334912	(206621510)	+	(AGGCCCC)n	Simple_repeat	1	60	(0)	82309
2528	9.5	1.0	0.0	chr1	43163335	43163638	(205792784)	+	AluSz	SINE/Alu	1	307	(5)	83881
444	27.4	3.0	1.4	chr1	43163747	43163920	(205792502)	+	HAL1	LINE/L1	1629	1853	(612)	83880
18	7.4	0.0	3.2	chr1	43903439	43903469	(205052953)	+	(CCT)n	Simple_repeat	1	31	(0)	85125
475	33.0	4.5	3.2	chr1	43903741	43903959	(205052463)	+	MIRb	SINE/MIR	2	223	(45)	85126
17	23.8	3.9	0.0	chr1	44138208	44138258	(204818164)	+	GA-rich	Low_complexity	1	53	(0)	85529
555	23.1	4.5	10.6	chr1	44227771	44227959	(204728463)	+	MIR	SINE/MIR	48	224	(38)	85706
1710	24.8	5.9	2.3	chr1	44874149	44874658	(204081764)	C	HAL1	LINE/L1	(435)	2072	1518	86890
1781	15.8	2.4	0.0	chr1	45001559	45001843	(203954579)	C	AluJb	SINE/Alu	(16)	296	5	87188
1296	26.5	4.6	0.6	chr1	45974814	45975166	(202981256)	C	L2	LINE/L2	(2588)	831	464	89118
16	16.3	0.0	2.8	chr1	47438097	47438132	(201518290)	+	(GCG)n	Simple_repeat	1	36	(0)	91599
26	32.6	3.8	1.4	chr1	47756854	47756986	(201199436)	+	(CT)n	Simple_repeat	1	138	(0)	92249
18	19.4	2.0	2.0	chr1	47757177	47757225	(201199197)	+	(AACAA)n	Simple_repeat	1	50	(0)	92250
13	19.2	2.2	4.3	chr1	50023922	50023966	(198932456)	+	(GGCGGCA)n	Simple_repeat	1	46	(0)	95990
14	22.9	2.9	5.7	chr1	50023967	50023987	(198932435)	+	G-rich	Low_complexity	3	70	(0)	95991
2091	23.6	15.9	1.5	chr1	50215167	50215969	(198740453)	+	L2	LINE/L2	759	1699	(1720)	96342
292	29.6	5.8	7.9	chr1	50215975	50216417	(198740005)	+	L2-3_Crp	LINE/L2	529	961	(1135)	96343
2075	15.6	1.1	1.6	chr1	51825831	51826194	(197130228)	+	MLT1A0	LTR/ERVL-MaLR	2	363	(2)	99507
2342	10.6	0.0	0.0	chr1	54040151	54040452	(194915970)	C	AluSx	SINE/Alu	(10)	302	1	104284
210	36.5	0.0	0.9	chr1	54122701	54122808	(194833614)	+	MIRc	SINE/MIR	15	121	(147)	104457
553	23.8	18.1	3.9	chr1	54219806	54220059	(194736363)	C	L1MC5a	LINE/L1	(2272)	505	364	104696
1604	22.0	2.1	1.9	chr1	57518539	57518955	(191437467)	+	LTR52	LTR/ERVL	1	418	(3)	110992
325	31.6	6.9	12.6	chr1	57518956	57519013	(191437409)	+	L2a	LINE/L2	3264	3314	(112)	110991
628	23.0	8.9	5.5	chr1	57519154	57519374	(191437048)	C	MIR	SINE/MIR	(28)	234	2	110993
1366	26.1	6.2	2.7	chr1	59060856	59061293	(189895129)	+	LTR16B2	LTR/ERVL	1	454	(8)	114105
964	17.4	5.2	1.6	chr1	59061334	59061520	(189894902)	+	MLT1A0	LTR/ERVL-MaLR	1	194	(171)	114106
231	25.4	4.3	0.0	chr1	59061780	59061846	(189894576)	C	MER91A	DNA/hAT-Tip100	(122)	74	5	114107
238	26.0	2.7	5.2	chr1	59511675	59511751	(189444671)	+	MER91C	DNA/hAT-Tip100	31	105	(35)	114999
15	19.2	4.1	2.0	chr1	61050196	61050245	(187906177)	+	(CCCTCT)n	Simple_repeat	1	51	(0)	117591
37	4.1	5.9	0.0	chr1	61082673	61082723	(187873699)	+	(TC)n	Simple_repeat	1	54	(0)	117650
15	18.9	6.2	0.0	chr1	61082727	61082774	(187873648)	+	(CACGCA)n	Simple_repeat	1	51	(0)	117651
20	24.2	0.0	5.3	chr1	61082849	61082923	(187873499)	+	G-rich	Low_complexity	1	75	(0)	117652
22	22.4	0.0	0.0	chr1	61082925	61082980	(187873442)	+	(GT)n	Simple_repeat	1	56	(0)	117653
23089	6.0	1.8	0.2	chr1	62180580	62183445	(186772977)	C	HERVK14-int	LTR/ERVK	(3184)	2912	1	119662
2721	5.8	0.3	0.3	chr1	62183446	62183789	(186772633)	C	LTR14A	LTR/ERVK	(0)	344	1	119662
28	40.0	2.7	0.7	chr1	62275816	62275962	(186680460)	+	GA-rich	Low_complexity	1	151	(0)	119887
311	32.9	17.4	3.6	chr1	62276057	62276277	(186680145)	C	L3	LINE/CR1	(148)	3951	3694	119888
13	8.9	0.0	3.9	chr1	62311498	62311523	(186644899)	+	(TCC)n	Simple_repeat	1	26	(0)	119967
12	22.5	2.7	0.0	chr1	63322195	63322231	(185634191)	+	G-rich	Low_complexity	1	38	(0)	121838
11	21.5	8.2	0.0	chr1	63322267	63322315	(185634107)	+	(CCCACG)n	Simple_repeat	1	53	(0)	121839
13	13.2	0.0	0.0	chr1	63322293	63322317	(185634105)	+	(CACC)n	Simple_repeat	1	25	(0)	121840
299	26.2	12.9	9.2	chr1	63679564	63679748	(185276674)	C	MIRc	SINE/MIR	(10)	198	6	122471
2441	14.7	3.2	2.1	chr1	63679751	63680175	(185276247)	+	MSTB1	LTR/ERVL-MaLR	3	432	(0)	122472
985	32.5	5.6	4.3	chr1	64225264	64225825	(184730597)	C	L2	LINE/L2	(361)	3058	2489	123508
2710	20.1	2.9	3.3	chr1	64225832	64226532	(184729890)	+	L1ME2	LINE/L1	5465	6162	(2)	123509
266	18.8	0.9	0.0	chr1	64745611	64745674	(184210748)	C	MIR1_Amn	SINE/MIR	(89)	141	70	124433
309	28.2	9.4	4.5	chr1	65002361	65002589	(183953833)	+	MIRb	SINE/MIR	8	251	(17)	124873
13	9.8	0.0	0.0	chr1	65002691	65002712	(183953710)	+	(CGG)n	Simple_repeat	1	22	(0)	124874
440	27.9	3.6	2.2	chr1	65264372	65264509	(183691913)	+	L2b	LINE/L2	3258	3386	(1)	125459
7868	17.6	2.9	1.9	chr1	69943989	69946329	(179010093)	C	L1MB1	LINE/L1	(23)	6643	4289	132661
1891	22.1	3.3	0.7	chr1	70457467	70457913	(178498509)	C	MER65C	LTR/ERV1	(0)	461	3	133475
296	22.3	3.0	5.2	chr1	74714814	74714924	(174241498)	C	L2a	LINE/L2	(0)	3426	3278	139053
13000	6.3	0.1	0.2	chr1	74742798	74744488	(174211934)	C	HERV9-int	LTR/ERV1	(2421)	2953	1265	139090
1537	23.2	1.7	1.0	chr1	75071476	75071971	(173884451)	C	MLT2F	LTR/ERVL	(119)	544	1	139499
2734	5.3	0.6	0.0	chr1	75354349	75354690	(173601732)	+	LTR14A	LTR/ERVK	1	344	(0)	139847
2264	17.1	2.6	1.7	chr1	76239342	76239763	(172716659)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	141149
221	23.9	0.0	0.0	chr1	76488562	76488607	(172467815)	+	L2a	LINE/L2	3381	3426	(0)	141514
423	32.1	12.4	2.8	chr1	76845136	76845426	(172110996)	C	L1MEd	LINE/L1	(6513)	573	251	142032
443	25.3	14.7	4.9	chr1	77058153	77058272	(171898150)	+	MIR	SINE/MIR	18	160	(102)	142303
2458	13.0	3.5	2.4	chr1	77058273	77058698	(171897724)	+	MSTB1	LTR/ERVL-MaLR	1	431	(1)	142304
4330	20.1	6.5	4.7	chr1	77241620	77242912	(171713510)	C	MER31-int	LTR/ERV1	(960)	5371	2968	142563
1833	18.9	5.4	1.6	chr1	77242914	77243284	(171713138)	C	MSTB	LTR/ERVL-MaLR	(0)	426	41	142566
35	11.7	2.8	2.7	chr1	77243285	77243355	(171713067)	+	(TTTC)n	Simple_repeat	1	73	(0)	142567
2654	4.7	0.3	0.0	chr1	77270357	77270657	(171685765)	C	AluYk4	SINE/Alu	(8)	303	2	142597
266	32.8	1.6	7.8	chr1	77270659	77270787	(171685635)	C	LTR78B	LTR/ERV1	(917)	379	259	142598
2239	17.2	5.2	0.0	chr1	77525329	77525729	(171430693)	C	MSTB	LTR/ERVL-MaLR	(0)	426	4	143038
3354	19.3	4.3	3.6	chr1	77525730	77526067	(171430355)	C	L1MB3	LINE/L1	(1275)	4871	4531	143034
298	37.5	2.0	1.4	chr1	77540380	77540525	(171415897)	C	MER117	DNA/hAT-Charlie	(32)	165	19	143065
269	27.7	1.2	4.6	chr1	77540802	77540888	(171415534)	C	SVA_A	Retroposon/SVA	(1174)	213	130	143066
344	34.0	16.4	0.0	chr1	81312879	81313072	(167643350)	+	MIRb	SINE/MIR	4	235	(33)	148271
1061	26.7	14.2	2.0	chr1	83653185	83653783	(165302639)	+	LTR50	LTR/ERVL	1	684	(111)	151453
12	7.7	3.2	6.2	chr1	83858995	83859025	(165097397)	+	(ATTA)n	Simple_repeat	1	32	(0)	151742
758	25.8	1.7	5.0	chr1	84833589	84833829	(164122593)	+	MIR	SINE/MIR	6	238	(24)	153177
290	25.6	13.2	0.8	chr1	85028702	85028827	(163927595)	+	MIR	SINE/MIR	112	255	(7)	153478
198	29.2	0.0	1.5	chr1	85079206	85079281	(163877141)	C	L2c	LINE/L2	(10)	3416	3330	153570
296	35.7	6.6	3.2	chr1	86800011	86800230	(162156192)	+	L2c	LINE/L2	2956	3187	(200)	156126
651	25.0	11.7	10.2	chr1	86800231	86800573	(162155849)	+	MLT1O	LTR/ERVL-MaLR	1	349	(193)	156127
344	32.6	4.8	1.1	chr1	87616327	87616506	(161339916)	+	MLT1L	LTR/ERVL-MaLR	420	606	(4)	157298
2070	26.2	5.3	5.5	chr1	90109786	90110598	(158845824)	C	L1ME4b	LINE/L1	(5)	887	77	160870
273	26.3	10.5	4.8	chr1	91655449	91655636	(157300786)	+	L2-1_AMi	LINE/L2	471	670	(565)	163055
305	25.3	0.0	0.0	chr1	91655641	91655731	(157300691)	+	L2	LINE/L2	2643	2733	(686)	163054
344	28.2	0.0	8.3	chr1	91655917	91656036	(157300386)	C	ERV3-16A3_I-int	LTR/ERVL	(3921)	1075	966	163056
1441	21.2	11.3	5.4	chr1	91656045	91656548	(157299874)	+	MLT1E1A	LTR/ERVL-MaLR	11	680	(0)	163057
1095	12.1	0.0	0.0	chr1	92085591	92085731	(156870691)	+	AluSx3	SINE/Alu	143	283	(28)	163859
1841	16.9	0.3	3.3	chr1	92085747	92085819	(156870603)	+	AluJb	SINE/Alu	1	74	(238)	163860
3618	10.8	5.1	3.2	chr1	92085820	92086413	(156870009)	C	LTR14B	LTR/ERVK	(0)	608	3	163861
1597	16.0	0.4	2.3	chr1	92710101	92710356	(156246066)	+	AluJb	SINE/Alu	41	291	(21)	164917
10736	9.5	5.0	0.3	chr1	93242516	93244021	(155712401)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	165978
257	30.6	4.5	19.4	chr1	94140663	94140697	(154815725)	+	MIRb	SINE/MIR	26	58	(210)	167346
1225	18.4	16.1	0.0	chr1	94140698	94140947	(154815475)	C	AluJr4	SINE/Alu	(13)	299	2	167347
257	30.6	4.5	19.4	chr1	94140948	94141199	(154815223)	+	MIRb	SINE/MIR	59	268	(0)	167346
3265	13.9	4.9	0.4	chr1	94562312	94562816	(154393606)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	167971
16	8.5	0.0	0.0	chr1	94926230	94926254	(154030168)	+	(AGC)n	Simple_repeat	1	25	(0)	168515
4645	4.8	3.8	0.3	chr1	95167440	95168023	(153788399)	+	LTR14B	LTR/ERVK	4	608	(0)	168956
382	23.6	11.2	4.1	chr1	95168126	95168291	(153788131)	C	MIRb	SINE/MIR	(68)	200	22	168957
21433	9.9	3.5	0.9	chr1	95737200	95743135	(153213287)	C	L1PB1	LINE/L1	(1)	6866	625	169756
1052	13.8	5.0	0.5	chr1	95743128	95743316	(153213106)	C	L1PB1	LINE/L1	(6663)	200	3	169756
287	34.4	8.4	6.0	chr1	95743333	95743584	(153212838)	C	L2a	LINE/L2	(245)	3181	2911	169755
1240	29.6	13.6	1.1	chr1	95743600	95744156	(153212266)	C	L2a	LINE/L2	(633)	2786	2149	169755
451	30.7	7.8	1.3	chr1	99280173	99280402	(149676020)	+	MIR	SINE/MIR	14	253	(9)	174631
2363	20.9	8.4	4.6	chr1	102099235	102099932	(146856490)	+	LTR8A	LTR/ERV1	1	727	(0)	178884
3106	22.5	3.7	2.8	chr1	102099933	102100451	(146855971)	+	LTR49-int	LTR/ERV1	2185	2658	(3673)	178882
2162	12.4	0.3	0.0	chr1	102811343	102811641	(146144781)	C	AluSz	SINE/Alu	(6)	306	7	179801
2973	15.6	2.1	6.8	chr1	102811642	102811952	(146144470)	C	LTR26	LTR/ERV1	(294)	309	1	179800
7226	17.3	2.9	1.0	chr1	104991439	104992790	(143963632)	+	Tigger2	DNA/TcMar-Tigger	38	1416	(1302)	182316
1680	18.1	12.4	0.5	chr1	105849147	105849523	(143106899)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	183336
2424	9.4	2.2	0.3	chr1	106421382	106421733	(142534689)	+	L1PA10	LINE/L1	5794	6152	(16)	184012
213	26.8	14.0	1.1	chr1	107871368	107871454	(141084968)	C	L3b	LINE/CR1	(139)	5093	4994	186002
462	30.4	12.7	6.0	chr1	108583442	108583642	(140372780)	C	L1ME4a	LINE/L1	(231)	5893	5698	186952
322	35.9	7.5	2.6	chr1	108583893	108584270	(140372152)	C	L2	LINE/L2	(1281)	2138	1741	186954
17	13.8	0.0	2.9	chr1	108692549	108692583	(140263839)	+	(CCCT)n	Simple_repeat	1	35	(0)	187164
17	19.2	2.0	2.0	chr1	108692627	108692691	(140263731)	+	(GCAGCA)n	Simple_repeat	1	65	(0)	187165
22	15.5	0.0	2.2	chr1	112249507	112249552	(136706870)	+	(CCACCC)n	Simple_repeat	1	46	(0)	192781
15	5.6	0.0	0.0	chr1	112905801	112905819	(136050603)	+	(T)n	Simple_repeat	1	19	(0)	194026
384	25.3	18.8	5.2	chr1	113759675	113759907	(135196515)	+	L2b	LINE/L2	3104	3375	(0)	195473
4026	12.0	5.7	0.1	chr1	115258108	115258756	(133697666)	+	LTR8B	LTR/ERV1	126	812	(8)	197925
209	24.1	7.8	5.7	chr1	115258757	115258844	(133697578)	C	L2a	LINE/L2	(240)	3186	3097	197926
524	32.0	17.4	0.3	chr1	115258841	115259163	(133697259)	+	L3	LINE/CR1	2449	2838	(1261)	197927
13	22.3	4.3	5.5	chr1	115642016	115642085	(133314337)	+	(CGCGGAC)n	Simple_repeat	1	73	(0)	198483
287	28.1	2.0	6.8	chr1	116499357	116499459	(132456963)	+	MARNA	DNA/TcMar-Mariner	74	171	(415)	199797
492	24.3	8.2	1.1	chr1	116887223	116887301	(132069121)	C	MIRc	SINE/MIR	(3)	265	174	200437
2258	15.8	5.2	2.4	chr1	116887302	116887715	(132068707)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	200438
500	33.8	4.0	4.7	chr1	117605016	117605270	(131351152)	C	MIR	SINE/MIR	(9)	253	1	201570
826	19.8	3.2	9.8	chr1	118602564	118602798	(130353624)	+	MER90a	LTR/ERV1	72	290	(324)	202962
1802	17.2	5.2	0.3	chr1	118602812	118603144	(130353278)	+	MLT1A	LTR/ERVL-MaLR	14	363	(11)	202963
1241	23.4	9.7	0.0	chr1	118603152	118603450	(130352972)	+	MER90a	LTR/ERV1	284	614	(0)	202962
201	22.7	5.7	1.5	chr1	119229454	119229520	(129726902)	C	MER91C	DNA/hAT-Tip100	(35)	105	36	203789
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1502	1.2	0.0	0.0	chr1	145465617	145465780	(103490642)	C	U1	snRNA	(1)	164	1	210998
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
7071	6.8	1.5	2.3	chr1	147232476	147234111	(101722311)	+	SVA_D	Retroposon/SVA	6	1386	(0)	213827
1549	12.6	4.3	0.4	chr1	147234109	147234356	(101722066)	+	LTR14B	LTR/ERVK	351	608	(0)	213826
306	20.6	3.9	1.4	chr1	147234460	147234533	(101721889)	+	MLT1D	LTR/ERVL-MaLR	3	78	(427)	213828
1505	0.6	0.0	0.0	chr1	148038753	148038916	(100917506)	C	U1	snRNA	(1)	164	1	215030
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
2228	8.9	0.3	0.0	chr1	148335176	148335467	(100620955)	C	AluSx	SINE/Alu	(19)	293	1	215517
12	20.4	2.4	2.4	chr1	151071222	151071262	(97885160)	+	G-rich	Low_complexity	1	42	(0)	220420
2341	7.6	0.0	5.8	chr1	151071444	151071771	(97884651)	C	AluSx	SINE/Alu	(3)	309	1	220421
261	34.2	9.4	7.9	chr1	151846050	151847013	(97109409)	+	L2c	LINE/L2	2315	3411	(15)	221974
2884	13.7	5.5	1.5	chr1	151907955	151908832	(97047590)	+	MER61-int	LTR/ERV1	247	1272	(3945)	222090
13	4.5	0.0	7.4	chr1	151945813	151945839	(97010583)	+	(AACA)n	Simple_repeat	1	27	(0)	222171
2256	20.5	1.6	0.7	chr1	152148950	152149371	(96807051)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	222447
22363	9.1	2.8	0.1	chr1	152527277	152531291	(96425131)	C	L1PREC2	LINE/L1	(1)	8154	4027	222920
4886	25.1	7.2	4.3	chr1	152531292	152531388	(96425034)	C	L1MC5a	LINE/L1	(259)	2518	2425	222919
2725	6.4	0.6	0.0	chr1	152531389	152531730	(96424692)	C	LTR14A	LTR/ERVK	(0)	344	1	222921
4886	25.1	7.2	4.3	chr1	152531731	152533370	(96423052)	C	L1MC5a	LINE/L1	(353)	2424	725	222919
1960	9.4	1.4	18.7	chr1	152618834	152619250	(96337172)	C	LTR14B	LTR/ERVK	(0)	608	1	222987
254	31.6	11.6	5.5	chr1	152734059	152734276	(96222146)	C	MIRb	SINE/MIR	(11)	257	25	223142
15	22.0	8.3	1.5	chr1	152734322	152734346	(96222076)	+	(CT)n	Simple_repeat	1	27	(0)	223143
2242	11.7	0.0	0.0	chr1	152734347	152734645	(96221777)	C	AluSg	SINE/Alu	(7)	303	5	223144
340	24.7	13.4	0.0	chr1	154198691	154198787	(94757635)	+	MER102c	DNA/hAT-Charlie	217	328	(3)	225655
222	31.0	8.3	2.9	chr1	154198789	154198891	(94757531)	C	MIR3	SINE/MIR	(63)	145	37	225656
4291	7.7	5.1	0.2	chr1	154908104	154908678	(94047744)	+	LTR14B	LTR/ERVK	4	608	(0)	227013
500	19.5	2.3	3.0	chr1	155140262	155140393	(93816029)	+	L1M1	LINE/L1	325	455	(7110)	227424
15	17.7	0.0	0.0	chr1	155140823	155140854	(93815568)	+	(ATTC)n	Simple_repeat	1	32	(0)	227425
3270	24.1	1.2	4.5	chr1	155622390	155623035	(93333387)	C	HERV17-int	LTR/ERV1	(0)	8626	7979	228462
4079	10.5	1.3	6.0	chr1	155623036	155623673	(93332749)	C	LTR14B	LTR/ERVK	(0)	608	1	228463
14	16.7	0.0	5.3	chr1	155688320	155688357	(93268065)	+	(GGC)n	Simple_repeat	1	38	(0)	228557
16	13.3	0.0	5.4	chr1	155688680	155688722	(93267700)	+	(CCT)n	Simple_repeat	1	40	(0)	228558
13	10.5	6.5	0.0	chr1	156421760	156421790	(92534632)	+	(CGGCTC)n	Simple_repeat	1	33	(0)	230116
251	27.8	4.4	3.6	chr1	157156416	157156527	(91799895)	+	MIR3	SINE/MIR	90	202	(6)	231347
1046	26.9	17.3	4.5	chr1	157189763	157190466	(91765956)	C	L2	LINE/L2	(536)	2883	2019	231404
1473	18.7	7.4	1.8	chr1	157306852	157307194	(91649228)	+	THE1D	LTR/ERVL-MaLR	15	378	(3)	231555
4991	13.2	6.3	0.4	chr1	160079616	160080414	(88876008)	+	L1MC1	LINE/L1	5483	6332	(1)	235201
518	27.6	7.1	1.3	chr1	160080429	160080586	(88875836)	+	MIRb	SINE/MIR	40	207	(61)	235202
14	12.4	2.4	7.1	chr1	160205260	160205300	(88751122)	+	(TCC)n	Simple_repeat	1	42	(0)	235408
15	14.7	5.0	6.3	chr1	160405620	160405679	(88550743)	+	G-rich	Low_complexity	1	63	(0)	235706
2625	19.2	2.7	3.9	chr1	160971573	160972137	(87984285)	C	MER74A	LTR/ERVL	(0)	558	1	236587
2414	5.7	0.7	2.0	chr1	161154490	161154788	(87801634)	C	AluSc	SINE/Alu	(14)	295	1	236990
37077	8.2	1.9	1.6	chr1	161252714	161256595	(87699827)	+	HERV9NC-int	LTR/ERV1	801	5224	(894)	237157
9974	6.9	9.6	3.4	chr1	162432972	162434448	(86521974)	+	LTR12C	LTR/ERV1	2	1579	(0)	239116
338	0.0	2.2	0.0	chr1	162941197	162941241	(86015181)	+	MADE1	DNA/TcMar-Mariner	1	46	(34)	239990
12	13.9	0.0	0.0	chr1	163561706	163561729	(85394693)	+	(CTTT)n	Simple_repeat	1	24	(0)	240946
2012	17.0	2.5	0.3	chr1	164447566	164447919	(84508503)	C	MSTB	LTR/ERVL-MaLR	(64)	362	1	242118
8760	18.0	2.5	2.9	chr1	164447920	164449575	(84506847)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	2	242118
2096	12.0	3.9	3.2	chr1	165328991	165329368	(83627054)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	243464
16	0.0	0.0	0.0	chr1	166975020	166975037	(81981385)	+	(TC)n	Simple_repeat	1	18	(0)	245956
27	8.6	0.0	0.0	chr1	166975037	166975073	(81981349)	+	(CA)n	Simple_repeat	1	37	(0)	245957
184	29.8	0.0	0.0	chr1	167662975	167663021	(81293401)	C	MIR3	SINE/MIR	(34)	174	128	247090
844	24.2	5.5	7.6	chr1	167699240	167699699	(81256723)	C	MLT1C	LTR/ERVL-MaLR	(20)	485	34	247155
702	35.4	6.4	3.1	chr1	167699704	167700123	(81256299)	+	L2b	LINE/L2	2941	3375	(0)	247156
188	28.2	1.3	4.9	chr1	168137392	168137473	(80818949)	C	L2b	LINE/L2	(1)	3374	3296	247861
4042	7.2	2.8	1.4	chr1	168457166	168457732	(80498690)	+	LTR14C	LTR/ERVK	12	586	(1)	248437
105	15.2	1.4	1.8	chr1	168457733	168457864	(80498558)	+	(TCTT)n	Simple_repeat	1	215	(0)	248438
346	25.5	18.5	3.7	chr1	168623497	168623648	(80332774)	+	MIRc	SINE/MIR	6	175	(55)	248661
1069	26.8	9.2	2.7	chr1	169824002	169824366	(79132056)	+	L2a	LINE/L2	1344	1734	(1685)	250513
233	30.8	8.1	5.3	chr1	169824367	169824798	(79131624)	+	L2-3_Crp	LINE/L2	553	997	(1099)	250514
22	0.0	0.0	0.0	chr1	170159422	170159445	(78796977)	+	(T)n	Simple_repeat	1	24	(0)	250939
484	29.0	9.7	0.5	chr1	170159517	170159723	(78796699)	C	L1M6B	LINE/L1	(2231)	234	3	250937
22684	8.9	1.1	1.0	chr1	170451717	170456048	(78500374)	C	L1PA7	LINE/L1	(0)	6469	2170	251338
2128	15.4	0.3	0.0	chr1	171626071	171626381	(77330041)	C	AluJr	SINE/Alu	(0)	312	1	253040
1166	13.9	21.6	3.4	chr1	173863025	173863261	(75093161)	+	AluSg7	SINE/Alu	1	292	(17)	256235
410	29.2	3.3	1.3	chr1	178934060	178934208	(70022214)	+	MIRb	SINE/MIR	108	259	(9)	263854
2175	11.3	2.7	0.0	chr1	179333559	179333849	(69622573)	+	AluSp	SINE/Alu	1	299	(14)	264654
1980	19.5	8.5	2.2	chr1	179334075	179334568	(69621854)	C	LTR64	LTR/ERV1	(0)	528	1	264655
2221	12.0	1.0	0.0	chr1	179388974	179389272	(69567150)	C	AluSx	SINE/Alu	(10)	302	1	264768
660	28.0	13.6	3.8	chr1	179389273	179389460	(69566962)	C	L1MEd	LINE/L1	(6217)	869	632	264766
250	29.1	7.6	2.5	chr1	179389661	179389822	(69566600)	C	L1MEd	LINE/L1	(6914)	172	2	264766
14	9.6	0.0	0.0	chr1	179882205	179882227	(69074195)	+	(TCC)n	Simple_repeat	1	23	(0)	265466
2779	12.2	2.5	2.5	chr1	180734178	180734621	(68221801)	C	LOR1a	LTR/ERV1	(0)	497	54	266873
250	27.1	3.2	10.1	chr1	180734749	180734916	(68221506)	C	L2c	LINE/L2	(1260)	2159	2004	266866
276	28.7	7.4	1.1	chr1	181185171	181185258	(67771164)	+	L2b	LINE/L2	3279	3372	(3)	267618
418	30.4	14.6	7.1	chr1	181185262	181185601	(67770821)	C	L2c	LINE/L2	(62)	3325	2956	267617
373	26.3	3.9	2.2	chr1	181345662	181345819	(67610603)	C	MIR3	SINE/MIR	(23)	185	32	267841
2405	11.4	0.0	0.0	chr1	183326094	183326401	(65630021)	+	AluSx	SINE/Alu	1	308	(4)	270933
454	34.4	4.3	8.7	chr1	183326402	183326614	(65629808)	C	L2a	LINE/L2	(230)	3196	2975	270932
303	28.0	20.5	0.0	chr1	183326642	183326877	(65629545)	C	L2a	LINE/L2	(543)	2876	2580	270932
2515	11.8	5.6	4.7	chr1	183787629	183788054	(65168368)	+	MSTB1	LTR/ERVL-MaLR	1	430	(2)	271646
2245	13.6	0.0	0.0	chr1	185131859	185132167	(63824255)	+	AluSz	SINE/Alu	1	309	(3)	273804
1929	28.5	13.8	11.0	chr1	185132168	185132235	(63824187)	+	HAL1	LINE/L1	1299	1347	(1160)	273802
2230	12.8	0.0	0.3	chr1	185132236	185132548	(63823874)	+	AluSz	SINE/Alu	1	312	(0)	273805
1411	4.0	1.7	0.0	chr1	186879846	186880019	(62076403)	C	L1PA5	LINE/L1	(6)	6148	5972	276245
16381	11.2	3.1	1.3	chr1	191003585	191007248	(57949174)	C	L1MA1	LINE/L1	(0)	6302	2574	281612
18	0.0	4.3	0.0	chr1	199929746	199929768	(49026654)	+	(TC)n	Simple_repeat	1	24	(0)	293252
982	29.3	6.6	2.5	chr1	199954621	199955026	(49001396)	C	LTR33	LTR/ERVL	(85)	430	7	293323
1618	14.4	4.9	7.5	chr1	200680456	200680747	(48275675)	+	AluSx	SINE/Alu	1	284	(28)	294788
17	0.0	0.0	0.0	chr1	200680749	200680769	(48275653)	+	(TAA)n	Simple_repeat	1	21	(0)	294789
591	30.1	8.0	5.5	chr1	200680770	200681184	(48275238)	+	L2	LINE/L2	1323	1748	(1671)	294790
16	18.9	0.0	0.0	chr1	200866981	200867010	(48089412)	+	(C)n	Simple_repeat	1	30	(0)	295124
204	22.8	5.0	1.7	chr1	200867065	200867122	(48089300)	C	MIR1_Amn	SINE/MIR	(147)	83	24	295125
30	15.9	1.5	2.9	chr1	201023446	201023512	(47932910)	+	(GGC)n	Simple_repeat	1	68	(0)	295379
645	24.0	5.4	5.4	chr1	201927747	201927868	(47028554)	+	MER105	DNA/hAT-Charlie	1	128	(75)	296859
2051	18.4	6.3	1.6	chr1	201927869	201928244	(47028178)	+	MSTD	LTR/ERVL-MaLR	1	395	(1)	296860
221	23.4	7.2	0.0	chr1	202109104	202109180	(46847242)	C	MIR3	SINE/MIR	(16)	192	110	297302
369	23.4	10.1	3.9	chr1	202220821	202220848	(46735574)	+	L1MA7	LINE/L1	6127	6168	(123)	297514
37	9.9	0.0	0.0	chr1	202220849	202220902	(46735520)	+	(AC)n	Simple_repeat	1	54	(0)	297515
470	20.0	0.0	0.0	chr1	202220903	202221002	(46735420)	+	L1MA9	LINE/L1	6173	6272	(40)	297516
469	28.5	7.5	2.1	chr1	202223960	202224149	(46732273)	C	MIRb	SINE/MIR	(48)	220	20	297519
247	24.1	0.0	0.0	chr1	202236638	202236691	(46719731)	+	L2b	LINE/L2	3313	3366	(9)	297540
2148	14.1	4.2	0.7	chr1	202389949	202390362	(46566060)	+	L1MB8	LINE/L1	4650	5078	(1068)	297829
316	25.2	2.5	5.7	chr1	202469876	202469997	(46486425)	+	Charlie4z	DNA/hAT-Charlie	48	165	(2)	297971
749	6.8	0.0	3.7	chr1	202692991	202693097	(46263325)	C	L1PB1	LINE/L1	(1)	6150	6048	298322
305	21.4	16.3	0.0	chr1	203455697	203455799	(45500623)	C	MIRc	SINE/MIR	(31)	237	115	299631
803	24.7	3.1	2.7	chr1	203455929	203456153	(45500269)	C	MER102b	DNA/hAT-Charlie	(107)	234	9	299632
247	34.0	2.8	3.5	chr1	204087532	204087712	(44868710)	+	MIR1_Amn	SINE/MIR	33	214	(16)	300955
533	26.1	7.2	3.5	chr1	204763277	204763502	(44192920)	C	MIRb	SINE/MIR	(8)	260	26	302211
366	33.6	8.3	5.1	chr1	204853051	204853307	(44103115)	C	Tigger19a	DNA/TcMar-Tigger	(13)	310	45	302403
13	16.2	0.0	0.0	chr1	205272883	205272910	(43683512)	+	(TATT)n	Simple_repeat	1	28	(0)	303106
3075	13.0	6.6	9.8	chr1	205857564	205858176	(43098246)	+	LTR14B	LTR/ERVK	15	606	(2)	304214
24718	8.4	2.0	0.1	chr1	205858179	205862406	(43094016)	+	HERVK14-int	LTR/ERVK	1	4310	(1786)	304214
1695	18.6	4.9	12.1	chr1	206616344	206616549	(42339873)	+	L1MC3	LINE/L1	5839	6023	(1762)	305403
2558	6.6	3.2	0.3	chr1	206616550	206616883	(42339539)	+	LTR14A	LTR/ERVK	1	344	(0)	305405
1533	12.8	7.2	0.0	chr1	206616884	206617126	(42339296)	+	L1MC3	LINE/L1	5928	6189	(144)	305403
3093	12.8	8.9	4.8	chr1	206778948	206779513	(42176909)	+	LTR14B	LTR/ERVK	17	608	(0)	305685
523	34.7	4.2	7.9	chr1	206779519	206779856	(42176566)	+	L2b	LINE/L2	2701	3035	(384)	305683
285	26.8	0.0	0.0	chr1	207051819	207051889	(41904533)	+	L2a	LINE/L2	3355	3425	(1)	306128
17774	10.6	1.3	1.8	chr1	207745200	207747909	(41208513)	+	HUERS-P3b-int	LTR/ERV1	4713	7409	(9)	307095
4036	12.9	1.7	0.3	chr1	207747920	207748554	(41207868)	+	LTR9B	LTR/ERV1	1	644	(0)	307095
440	35.2	8.0	8.4	chr1	209748206	209748670	(39207752)	+	L2c	LINE/L2	2924	3386	(1)	310137
426	30.1	5.2	2.1	chr1	209861281	209861467	(39094955)	C	MIRb	SINE/MIR	(7)	261	69	310296
338	29.1	2.6	5.7	chr1	210361718	210361874	(38594548)	+	L2c	LINE/L2	2260	2411	(1008)	311043
1914	15.3	2.0	2.3	chr1	211138359	211138658	(37817764)	C	AluJr	SINE/Alu	(12)	300	2	312156
308	38.2	4.6	5.2	chr1	211138659	211138873	(37817549)	+	L2	LINE/L2	437	648	(2771)	312155
226	24.8	17.0	1.8	chr1	212711615	212711689	(36244733)	C	L1ME3G	LINE/L1	(103)	821	727	315012
213	32.2	0.0	1.7	chr1	212711696	212711755	(36244667)	+	L2c	LINE/L2	3260	3318	(69)	315009
320	23.6	5.3	0.0	chr1	212711807	212711895	(36244527)	C	MIR	SINE/MIR	(125)	137	44	315014
687	24.9	7.1	4.9	chr1	213014842	213015145	(35941277)	+	MER113A	DNA/hAT-Charlie	3	313	(1)	315576
12	25.3	1.6	6.2	chr1	213015515	213015577	(35940845)	+	(GCCC)n	Simple_repeat	1	64	(0)	315577
2066	13.5	5.9	8.8	chr1	213034843	213035247	(35921175)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	63	315604
1807	16.4	2.6	2.3	chr1	213035248	213035557	(35920865)	C	AluJb	SINE/Alu	(1)	311	1	315605
2066	13.5	5.9	8.8	chr1	213035558	213035605	(35920817)	C	MSTB2	LTR/ERVL-MaLR	(395)	62	18	315604
6174	13.0	4.3	1.3	chr1	213211912	213213582	(35742840)	C	L1MC1	LINE/L1	(0)	6333	4621	315885
2284	11.1	0.3	0.0	chr1	213354936	213355233	(35601189)	+	AluSx	SINE/Alu	1	299	(13)	316106
6055	13.0	1.4	0.2	chr1	213872295	213873191	(35083231)	+	Tigger1	DNA/TcMar-Tigger	32	939	(1479)	316867
2784	14.7	2.1	0.4	chr1	213873187	213873651	(35082771)	+	Tigger1	DNA/TcMar-Tigger	1946	2418	(0)	316868
359	36.4	6.8	4.1	chr1	216144934	216145374	(32811048)	C	MLT1O	LTR/ERVL-MaLR	(54)	488	35	320010
3458	5.8	0.0	0.7	chr1	216145601	216146051	(32810371)	+	LTR7	LTR/ERV1	1	448	(2)	320011
253	27.7	3.8	1.9	chr1	219639552	219639654	(29316768)	+	L1ME4b	LINE/L1	324	428	(464)	324903
592	31.6	8.0	4.1	chr1	222247880	222248314	(26708108)	+	LTR33	LTR/ERVL	4	456	(59)	328846
186	23.9	7.8	4.0	chr1	222248323	222248396	(26708026)	+	L2	LINE/L2	1462	1538	(1881)	328847
736	28.6	7.8	4.2	chr1	222590352	222590708	(26365714)	+	L3	LINE/CR1	3606	3976	(123)	329390
2013	11.6	1.0	2.4	chr1	222590769	222591062	(26365360)	+	AluJb	SINE/Alu	1	290	(22)	329391
28	0.0	0.0	0.0	chr1	223052352	223052378	(25904044)	+	(AGAC)n	Simple_repeat	1	27	(0)	330105
303	20.9	22.5	0.0	chr1	223052910	223052995	(25903427)	C	MIR3	SINE/MIR	(14)	194	84	330106
261	25.4	0.0	0.0	chr1	223300851	223300905	(25655517)	C	MIR3	SINE/MIR	(36)	172	118	330494
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
5024	23.5	10.3	2.9	chr1	224072485	224073639	(24882783)	+	HAL1	LINE/L1	1246	2483	(24)	331722
2403	16.4	7.0	0.0	chr1	224073649	224074044	(24882378)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	331727
334	28.8	9.5	1.1	chr1	225391509	225391768	(23564654)	C	L2	LINE/L2	(703)	2716	2433	333911
24	13.0	0.0	0.0	chr1	225566241	225566283	(23390139)	+	(TTGT)n	Simple_repeat	1	43	(0)	334147
2382	9.4	0.0	0.7	chr1	225770073	225770379	(23186043)	C	AluSp	SINE/Alu	(3)	310	6	334553
2487	8.2	0.0	0.0	chr1	225800309	225800612	(23155810)	+	AluY	SINE/Alu	1	304	(7)	334601
8552	10.6	0.8	2.1	chr1	225800613	225800788	(23155634)	C	HERVK14-int	LTR/ERVK	(5916)	180	3	334598
3165	12.7	6.9	8.6	chr1	225800789	225801391	(23155031)	C	LTR14B	LTR/ERVK	(0)	608	17	334598
203	32.5	2.4	0.0	chr1	225825408	225825487	(23130935)	+	L3b	LINE/CR1	4798	4879	(353)	334644
1889	11.4	9.4	4.2	chr1	226272595	226273002	(22683420)	+	LTR14B	LTR/ERVK	7	608	(0)	335578
641	15.5	0.0	1.9	chr1	226273003	226273107	(22683315)	C	AluJb	SINE/Alu	(208)	104	2	335577
385	21.1	5.2	8.7	chr1	226273109	226273256	(22683166)	C	L1M4a2	LINE/L1	(88)	2568	2429	335579
2152	15.1	9.2	0.5	chr1	227091240	227091624	(21864798)	+	MSTB	LTR/ERVL-MaLR	1	422	(4)	336901
5275	22.8	7.6	2.8	chr1	227579131	227580326	(21376096)	C	L1PA13	LINE/L1	(5527)	1258	1	337670
49718	5.6	0.6	0.5	chr1	227625558	227631559	(21324863)	C	HERV17-int	LTR/ERV1	(1078)	7548	1537	337721
12	27.8	0.0	5.3	chr1	227737682	227737738	(21218684)	+	GA-rich	Low_complexity	1	57	(0)	337834
2511	8.0	9.9	0.4	chr1	228536832	228537276	(20419146)	+	LTR14B	LTR/ERVK	1	608	(0)	338866
669	17.8	0.6	0.0	chr1	228537285	228539116	(20417306)	+	HSAT4	Satellite/centr	1	1843	(5)	338867
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
18	24.5	0.0	0.0	chr1	228646795	228646837	(20309585)	+	(CA)n	Simple_repeat	1	43	(0)	338981
2101	13.2	0.0	0.0	chr1	228860238	228860518	(20095904)	C	AluSg	SINE/Alu	(29)	281	1	339312
254	18.0	1.9	0.0	chr1	228860727	228860790	(20095632)	+	MER4CL34	LTR/ERV1	433	483	(282)	339313
4709	15.2	3.4	1.0	chr1	229195138	229196103	(19760319)	+	L1MB8	LINE/L1	5187	6178	(0)	339827
529	15.1	7.0	0.0	chr1	229344696	229344788	(19611634)	C	MLT1H2	LTR/ERVL-MaLR	(1)	488	389	340090
2377	15.7	3.0	1.0	chr1	229344852	229345268	(19611154)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	340091
302	28.6	7.8	1.6	chr1	229556824	229556944	(19399478)	C	L2b	LINE/L2	(0)	3375	3247	340495
221	32.5	0.9	5.0	chr1	229557306	229557425	(19398997)	+	L2c	LINE/L2	3272	3386	(1)	340496
366	19.7	0.0	0.0	chr1	229759077	229759137	(19197285)	C	MER45A	DNA/hAT-Tip100	(0)	178	118	340850
699	24.9	10.3	2.2	chr1	229759166	229759286	(19197136)	C	MLT2F	LTR/ERVL	(372)	291	147	340851
33	0.0	0.0	0.0	chr1	229759287	229759314	(19197108)	+	(TG)n	Simple_repeat	1	28	(0)	340852
699	24.9	10.3	2.2	chr1	229759315	229759459	(19196963)	C	MLT2F	LTR/ERVL	(517)	146	1	340851
250	29.1	5.9	8.0	chr1	229759460	229759595	(19196827)	C	MLT1J-int	LTR/ERVL-MaLR	(1134)	253	121	340849
1599	16.8	8.3	0.3	chr1	230088110	230088432	(18867990)	C	L1MB2	LINE/L1	(9)	6162	5812	341394
1676	17.8	5.4	3.8	chr1	230088437	230088536	(18867886)	C	L1MB5	LINE/L1	(0)	6174	6076	341395
4824	14.1	6.2	1.8	chr1	230187340	230188107	(18768315)	C	LTR1E	LTR/ERV1	(0)	804	1	341521
396	15.7	5.7	0.0	chr1	230852361	230852443	(18103979)	+	L1MB3	LINE/L1	5953	6040	(143)	342511
592	16.4	0.0	4.1	chr1	230852444	230852564	(18103858)	+	L1MA7	LINE/L1	6171	6286	(5)	342512
797	14.4	0.0	0.0	chr1	230852579	230852710	(18103712)	+	L1MB3	LINE/L1	6050	6181	(2)	342511
526	32.8	3.3	2.2	chr1	232184909	232185179	(16771243)	C	UCON28b	Unknown	(62)	513	240	344628
2732	4.7	0.0	4.1	chr1	232597396	232597715	(16358707)	+	AluY	SINE/Alu	1	307	(4)	345133
4787	12.7	6.3	0.4	chr1	232773205	232773979	(16182443)	+	LTR1B	LTR/ERV1	1	824	(0)	345402
2291	16.9	2.6	1.9	chr1	232877594	232878015	(16078407)	+	MSTB1	LTR/ERVL-MaLR	4	428	(4)	345576
218	36.0	11.9	4.0	chr1	233599900	233600855	(15355567)	+	L2	LINE/L2	175	1216	(2203)	346647
1854	25.6	7.2	1.5	chr1	233610659	233611181	(15345241)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	1	346661
4590	7.0	0.0	4.1	chr1	233611186	233611797	(15344625)	C	LTR14C	LTR/ERVK	(0)	587	1	346662
2332	16.2	3.0	2.3	chr1	234037052	234037480	(14918942)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	347271
1115	27.8	8.4	4.9	chr1	234037481	234037872	(14918550)	C	L2a	LINE/L2	(49)	3377	2963	347270
343	31.9	2.6	5.5	chr1	234558218	234558419	(14398003)	+	MIRb	SINE/MIR	73	268	(0)	348087
204	28.3	0.0	0.0	chr1	235820053	235820105	(13136317)	C	L2c	LINE/L2	(0)	3387	3335	350440
2153	16.0	0.0	0.3	chr1	235820358	235820670	(13135752)	C	AluJb	SINE/Alu	(0)	312	1	350441
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
1600	18.6	11.8	3.0	chr1	236977208	236977578	(11978844)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	352577
419	27.6	3.0	3.7	chr1	237870811	237870990	(11085432)	C	MLT1G	LTR/ERVL-MaLR	(308)	287	77	353904
4437	16.9	5.9	1.6	chr1	238746025	238746874	(10209548)	+	MER52-int	LTR/ERV1	1	888	(6203)	355119
12061	8.9	0.4	0.2	chr1	239979013	239980586	(8975836)	+	THE1B-int	LTR/ERVL-MaLR	4	1580	(0)	356941
466	34.9	6.4	1.4	chr1	240830140	240830360	(8126062)	+	LTR81A	LTR/Gypsy	668	900	(450)	358323
262	36.2	1.5	5.3	chr1	240830397	240830603	(8125819)	+	LTR81C	LTR/Gypsy	781	979	(174)	358325
320	18.5	1.5	0.0	chr1	240830651	240830715	(8125707)	+	LTR81A	LTR/Gypsy	1253	1318	(32)	358326
4850	17.0	5.7	0.8	chr1	240857226	240857738	(8098684)	C	L1MC2	LINE/L1	(14)	6330	5800	358369
2830	8.3	0.8	0.0	chr1	240857739	240858110	(8098312)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	358370
1611	17.4	0.0	1.4	chr1	244461823	244462103	(4494319)	C	AluJr	SINE/Alu	(21)	291	15	364218
3940	26.5	9.7	11.0	chr1	244779902	244781181	(4175241)	+	L2a	LINE/L2	869	2188	(1231)	364747
15	3.6	6.5	3.0	chr1	244835195	244835233	(4121189)	+	(GGGCTG)n	Simple_repeat	1	40	(0)	364892
239	26.0	9.6	2.8	chr1	247112595	247112701	(1843721)	+	MIRb	SINE/MIR	122	236	(32)	368666
6441	9.5	0.7	1.1	chr1	248104922	248105330	(851092)	C	L1PA8	LINE/L1	(0)	6172	5766	370085
3862	11.1	0.7	4.9	chr1	248105331	248105963	(850459)	C	LTR14B	LTR/ERVK	(0)	608	3	370086
35	29.2	0.9	1.8	chr10	84099	84211	(133713211)	+	(CA)n	Simple_repeat	1	114	(0)	371110
32	26.3	0.0	2.2	chr10	84383	84472	(133712950)	+	(CA)n	Simple_repeat	1	90	(0)	371111
256	30.9	2.3	0.8	chr10	517218	517344	(133280078)	C	MER104	DNA/TcMar-Tc2	(6)	175	47	371587
1630	17.3	3.3	0.0	chr10	961606	961923	(132835499)	C	MSTB1	LTR/ERVL-MaLR	(103)	329	1	372084
889	19.2	5.3	5.3	chr10	961929	962010	(132835412)	C	MLT1B	LTR/ERVL-MaLR	(163)	227	146	372083
2355	10.5	0.0	1.3	chr10	962011	962323	(132835099)	+	AluSp	SINE/Alu	1	309	(4)	372085
1094	18.0	3.2	0.0	chr10	1364519	1364729	(132432693)	+	MER2	DNA/TcMar-Tigger	1	218	(127)	372515
2258	17.9	6.7	2.6	chr10	1364739	1364871	(132432551)	+	Tigger1	DNA/TcMar-Tigger	29	162	(2256)	372516
2391	9.3	0.3	0.0	chr10	1364872	1365171	(132432251)	C	AluSx1	SINE/Alu	(11)	301	1	372517
462	28.8	4.6	0.7	chr10	3193500	3193646	(130603776)	+	MLT1K	LTR/ERVL-MaLR	166	318	(277)	374753
201	31.8	1.8	2.6	chr10	5492486	5492598	(128304824)	C	MIR1_Amn	SINE/MIR	(78)	152	41	377832
1711	14.1	9.4	0.0	chr10	5691896	5692164	(128105258)	+	AluSz	SINE/Alu	1	297	(15)	378139
187	18.8	4.0	7.7	chr10	5890683	5890734	(127906688)	+	MIRc	SINE/MIR	60	109	(159)	378517
852	17.3	1.8	0.0	chr10	6075265	6075426	(127721996)	C	L1MC1	LINE/L1	(0)	6333	6169	378854
2120	13.3	8.2	3.7	chr10	7883775	7884180	(125913242)	C	MSTC	LTR/ERVL-MaLR	(2)	426	1	381783
4960	22.7	6.2	2.1	chr10	7884181	7884392	(125913030)	C	L1MC4	LINE/L1	(1017)	7025	6817	381782
5331	14.5	2.7	6.5	chr10	10670427	10670888	(123126534)	C	L1MC1	LINE/L1	(9)	6499	6041	385936
2073	12.2	1.7	0.0	chr10	12127110	12127403	(121670019)	+	AluSz	SINE/Alu	1	299	(13)	388247
917	16.0	1.8	4.0	chr10	12127581	12127755	(121669667)	C	AluJo	SINE/Alu	(57)	255	85	388248
478	21.2	1.7	2.6	chr10	14050250	14050386	(119747036)	C	MIR	SINE/MIR	(34)	234	100	391830
2648	21.6	9.3	0.3	chr10	14050443	14051124	(119746298)	+	MER21C	LTR/ERVL	7	855	(83)	391831
275	29.3	5.0	6.3	chr10	15293359	15293500	(118503922)	C	L2a	LINE/L2	(10)	3416	3277	393999
213	26.7	0.0	9.6	chr10	15293749	15293831	(118503591)	C	L2a	LINE/L2	(200)	3175	3101	393999
236	30.6	10.6	9.1	chr10	15293856	15294096	(118503326)	+	MLT1N2	LTR/ERVL-MaLR	72	316	(246)	394000
294	28.1	1.7	2.3	chr10	16835294	16835393	(116962029)	C	MIR3	SINE/MIR	(36)	172	77	396458
12	22.1	0.0	0.0	chr10	17229093	17229124	(116568298)	+	(GGCCCA)n	Simple_repeat	1	32	(0)	397005
1772	14.2	0.7	5.1	chr10	17437174	17437469	(116359953)	C	AluJr	SINE/Alu	(27)	285	3	397377
61	0.0	0.0	0.0	chr10	17437611	17437665	(116359757)	+	(TTCC)n	Simple_repeat	1	55	(0)	397378
28	2.4	2.2	4.3	chr10	17437668	17437691	(116359731)	+	(TCTCTT)n	Simple_repeat	1	23	(0)	397379
38	4.7	0.0	0.0	chr10	17437692	17437736	(116359686)	+	(CCTTCCCTT)n	Simple_repeat	1	45	(0)	397380
28	2.4	2.2	4.3	chr10	17437737	17437759	(116359663)	+	(TCTCTT)n	Simple_repeat	5	27	(0)	397381
2061	11.3	0.0	0.0	chr10	17437764	17438028	(116359394)	C	AluSx4	SINE/Alu	(45)	265	1	397382
2427	12.8	7.4	1.4	chr10	20509311	20509739	(113287683)	+	MSTB2	LTR/ERVL-MaLR	1	457	(0)	402164
2181	17.3	2.3	2.9	chr10	21040356	21040673	(112756749)	C	MSTB	LTR/ERVL-MaLR	(73)	353	41	402884
1896	12.0	1.4	2.8	chr10	21040674	21040686	(112756736)	C	L1PA15	LINE/L1	(0)	6165	6153	402886
2150	14.2	13.7	0.5	chr10	21040687	21041055	(112756367)	+	MSTA	LTR/ERVL-MaLR	4	428	(0)	402887
1984	17.5	9.3	0.8	chr10	25823985	25824375	(107973047)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	410746
1973	9.5	2.3	18.2	chr10	26997607	26998017	(106799405)	+	LTR14A	LTR/ERVK	1	344	(0)	412681
20855	16.0	4.1	2.2	chr10	26998018	26999995	(106797427)	C	PRIMA4-int	LTR/ERV1	(5891)	2379	348	412674
1810	20.5	15.3	5.2	chr10	27583488	27584047	(106213375)	+	MLT1E2	LTR/ERVL-MaLR	1	627	(0)	413684
481	36.5	3.8	8.1	chr10	27889794	27889997	(105907425)	C	L2	LINE/L2	(2067)	1352	1158	414140
366	6.8	6.3	0.0	chr10	27889998	27890056	(105907366)	+	L1PB4	LINE/L1	6093	6155	(1)	414141
13	25.0	0.0	0.0	chr10	28303080	28303117	(105494305)	+	(GGCGG)n	Simple_repeat	1	38	(0)	414798
2454	12.0	1.6	0.8	chr10	28908094	28908470	(104888952)	+	THE1D	LTR/ERVL-MaLR	1	380	(1)	415955
667	31.2	12.2	4.1	chr10	30514933	30515543	(103281879)	+	ERV3-16A3_I-int	LTR/ERVL	693	1359	(3867)	418875
2224	16.9	4.2	3.3	chr10	30816147	30816452	(102980970)	C	MSTB	LTR/ERVL-MaLR	(114)	312	1	419415
4365	17.9	5.1	4.0	chr10	33344443	33345333	(100452089)	C	MER54A	LTR/ERVL	(0)	901	1	423112
2157	25.4	8.9	8.3	chr10	34512095	34513278	(99284144)	C	L1MC5	LINE/L1	(734)	8570	7379	424832
24	15.5	2.0	0.0	chr10	34814822	34814871	(98982551)	+	(CCCGCC)n	Simple_repeat	1	51	(0)	425323
16	27.3	1.6	3.2	chr10	34814996	34815057	(98982365)	+	(GCC)n	Simple_repeat	1	63	(0)	425324
3220	15.2	3.8	0.6	chr10	35887797	35888419	(97909003)	C	LTR27	LTR/ERV1	(0)	636	3	427260
4350	23.1	7.4	6.1	chr10	38158754	38159646	(95637776)	C	L1MC4a	LINE/L1	(10)	7872	6959	430624
1979	9.2	1.5	18.1	chr10	38159647	38160060	(95637362)	C	LTR14A	LTR/ERVK	(0)	344	1	430625
4350	23.1	7.4	6.1	chr10	38160061	38160762	(95636660)	C	L1MC4a	LINE/L1	(924)	6958	6254	430624
38	10.4	0.0	0.0	chr10	42165831	42165892	(91631530)	+	(GAATG)n	Simple_repeat	1	62	(0)	431764
85	9.6	1.3	1.3	chr10	42165959	42166108	(91631314)	+	(GGAAT)n	Simple_repeat	1	152	(0)	431765
24	22.5	5.1	2.9	chr10	43203182	43203279	(90594143)	+	(CCCTGCC)n	Simple_repeat	1	103	(0)	433077
297	23.6	7.7	7.3	chr10	43284777	43284928	(90512494)	+	MIR3	SINE/MIR	17	178	(52)	433184
918	22.8	2.7	0.0	chr10	44530246	44530495	(89266927)	+	L1M3	LINE/L1	2617	2873	(3267)	434932
236	6.1	0.0	0.0	chr10	44530511	44530543	(89266879)	C	MSTB	LTR/ERVL-MaLR	(321)	136	104	434931
1982	21.6	4.7	2.2	chr10	44530547	44531270	(89266152)	C	L1MB5	LINE/L1	(3794)	3048	1999	434929
495	29.8	13.1	3.5	chr10	44640020	44640561	(89156861)	+	L1ME3C	LINE/L1	5389	5994	(129)	435054
319	36.9	3.0	0.5	chr10	44640680	44640875	(89156547)	+	LTR33A	LTR/ERVL	307	507	(13)	435055
2664	6.8	1.2	0.0	chr10	45818019	45818358	(87979064)	C	LTR14A	LTR/ERVK	(0)	344	1	436653
1856	23.9	6.4	6.0	chr10	46059115	46059768	(87737654)	C	MER67B	LTR/ERV1	(0)	661	5	437112
2423	7.1	0.0	4.3	chr10	46059772	46060117	(87737305)	C	AluY	SINE/Alu	(0)	311	1	437113
2771	5.9	1.2	0.0	chr10	46094952	46095291	(87702131)	+	LTR14A	LTR/ERVK	1	344	(0)	437191
2694	5.8	0.3	0.0	chr10	46269530	46269872	(87527550)	+	LTR14A	LTR/ERVK	1	344	(0)	437419
13	24.3	0.0	2.4	chr10	46548360	46548400	(87249022)	+	(CTCC)n	Simple_repeat	1	41	(0)	437843
190	30.9	15.4	0.8	chr10	47255286	47255412	(86542010)	C	L3	LINE/CR1	(160)	3939	3791	438941
253	33.3	2.9	4.7	chr10	47255729	47255835	(86541587)	+	MIR1_Amn	SINE/MIR	125	229	(1)	438942
336	29.8	12.0	1.6	chr10	48195374	48195774	(85601648)	+	L1MC5	LINE/L1	5341	5563	(561)	440219
2111	9.9	0.3	17.9	chr10	48585059	48585476	(85211946)	+	LTR14A	LTR/ERVK	1	344	(0)	440751
2153	14.1	6.1	2.0	chr10	49334742	49335133	(84462289)	C	MSTA	LTR/ERVL-MaLR	(19)	409	1	441761
413	23.4	0.2	7.1	chr10	49335185	49335315	(84462107)	+	MLT1H1	LTR/ERVL-MaLR	428	554	(1)	441759
2512	10.3	0.0	0.0	chr10	49540026	49540337	(84257085)	C	AluSq2	SINE/Alu	(0)	313	2	441991
259	20.9	14.8	0.0	chr10	49540540	49540625	(84256797)	C	LTR33	LTR/ERVL	(23)	492	392	441992
716	9.0	0.8	14.7	chr10	49540638	49540780	(84256642)	+	MLT1B	LTR/ERVL-MaLR	1	123	(267)	441993
598	27.0	7.8	3.1	chr10	49540915	49540971	(84256451)	+	MER63A	DNA/hAT-Blackjack	5	63	(147)	441994
7303	17.3	6.2	2.2	chr10	50141175	50143096	(83654326)	+	L1MB8	LINE/L1	4162	6168	(10)	442923
36	0.0	0.0	0.0	chr10	50991311	50991343	(82806079)	+	(GCC)n	Simple_repeat	1	33	(0)	444194
300	32.7	6.4	15.2	chr10	51399478	51400097	(82397325)	+	MLT1N2	LTR/ERVL-MaLR	1	562	(0)	444791
2202	18.6	5.3	5.7	chr10	52018687	52018914	(81778508)	C	MER67D	LTR/ERV1	(4)	510	263	445718
1753	18.1	9.5	1.0	chr10	52018915	52019309	(81778113)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	445719
2202	18.6	5.3	5.7	chr10	52019310	52019587	(81777835)	C	MER67D	LTR/ERV1	(252)	262	6	445718
1254	22.5	11.3	6.2	chr10	52683283	52683718	(81113704)	C	LTR37B	LTR/ERV1	(0)	468	8	446634
2356	28.6	8.8	2.2	chr10	52697544	52698511	(81098911)	+	L2a	LINE/L2	1354	2392	(1027)	446663
693	17.0	0.0	0.0	chr10	53881990	53882101	(79915321)	C	AluSx	SINE/Alu	(12)	300	189	448172
2639	5.8	0.3	0.3	chr10	53882125	53882468	(79914954)	+	LTR14A	LTR/ERVK	1	344	(0)	448173
1485	9.9	0.0	0.5	chr10	53882470	53882662	(79914760)	C	AluSx	SINE/Alu	(120)	192	1	448172
12	18.7	3.6	6.9	chr10	58980236	58980291	(74817131)	+	G-rich	Low_complexity	1	58	(0)	454881
1804	16.4	0.0	4.9	chr10	60730150	60730454	(73066968)	C	AluJo	SINE/Alu	(19)	293	4	457507
665	25.4	11.0	4.1	chr10	62273205	62273475	(71523947)	+	Charlie2a	DNA/hAT-Charlie	33	324	(2537)	459814
2192	10.9	0.7	0.0	chr10	62273476	62273758	(71523664)	+	AluSx1	SINE/Alu	1	285	(27)	459815
1999	14.1	0.9	1.8	chr10	65570387	65570726	(68226696)	+	MER61A	LTR/ERV1	1	337	(4)	464914
1677	23.0	4.2	7.1	chr10	65570727	65571292	(68226130)	+	MER61-int	LTR/ERV1	1	549	(4668)	464914
2064	14.9	2.1	0.3	chr10	65890591	65890961	(67906461)	+	L1MA8	LINE/L1	5911	6288	(3)	465356
913	29.0	6.4	1.8	chr10	66985320	66985659	(66811763)	C	LTR33	LTR/ERVL	(146)	369	13	466871
2719	20.7	4.7	3.8	chr10	68867277	68868120	(64929302)	C	HERVK9-int	LTR/ERVK	(5237)	859	7	470317
3020	12.6	5.3	0.0	chr10	68868125	68868584	(64928838)	C	MER9a3	LTR/ERVK	(0)	512	27	470317
4846	19.0	7.3	4.5	chr10	69534999	69535607	(64261815)	+	L1MC5	LINE/L1	2086	2529	(462)	471794
188	33.9	2.7	5.2	chr10	69535679	69535793	(64261629)	+	L2b	LINE/L2	3263	3374	(1)	471799
2389	10.8	0.0	0.0	chr10	70100610	70100916	(63696506)	C	AluSz6	SINE/Alu	(5)	307	1	472750
2322	16.1	6.3	2.0	chr10	70100922	70101028	(63696394)	C	L1MB5	LINE/L1	(38)	6136	6035	472751
4792	6.4	2.0	0.2	chr10	70101029	70101625	(63695797)	C	LTR14B	LTR/ERVK	(0)	608	1	472752
6158	23.9	4.9	2.1	chr10	71113492	71115574	(62681848)	+	L1MEc	LINE/L1	3513	5660	(692)	474662
2508	15.9	3.8	0.2	chr10	71115575	71115985	(62681437)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	474678
3045	13.9	6.8	5.2	chr10	71955167	71955757	(61841665)	+	LTR14B	LTR/ERVK	8	608	(0)	476256
30563	8.8	1.8	0.9	chr10	71955758	71955958	(61841464)	+	HERVK14-int	LTR/ERVK	1	184	(5912)	476256
6278	11.4	1.2	2.3	chr10	71955959	71956922	(61840500)	+	LTR13_	LTR/ERVK	1	954	(0)	476257
13	21.9	0.0	2.6	chr10	74824875	74824913	(58972509)	+	(CCCCTCC)n	Simple_repeat	1	39	(0)	481940
24	31.9	1.0	1.9	chr10	74826673	74826776	(58970646)	+	(GGC)n	Simple_repeat	1	105	(0)	481944
518	23.9	0.8	0.8	chr10	77525602	77525719	(56271703)	+	MIR3	SINE/MIR	87	204	(4)	486093
1088	30.8	6.0	4.8	chr10	77525777	77526336	(56271086)	+	MLT1L	LTR/ERVL-MaLR	41	607	(3)	486094
2231	12.7	6.0	0.6	chr10	77755875	77756217	(56041205)	+	L1M2	LINE/L1	5119	5490	(807)	486533
26	0.0	0.0	0.0	chr10	77756218	77756242	(56041180)	+	(AAAT)n	Simple_repeat	1	25	(0)	486537
2231	11.5	6.2	0.5	chr10	77756243	77756393	(56041029)	+	L1M2	LINE/L1	5491	5641	(656)	486533
1603	14.4	11.1	3.4	chr10	77756391	77756832	(56040590)	+	L1M3f	LINE/L1	1648	2123	(4442)	486538
647	20.3	2.9	0.0	chr10	78145120	78145252	(55652170)	+	UCON19	Unknown	91	227	(151)	487263
1169	32.3	8.6	2.9	chr10	79885774	79886822	(53910600)	C	L2a	LINE/L2	(0)	3426	2295	490287
875	17.1	1.7	2.2	chr10	79886823	79887001	(53910421)	C	L1ME3A	LINE/L1	(0)	6173	5996	490288
497	24.8	4.6	1.6	chr10	79887009	79887135	(53910287)	+	L1ME3A	LINE/L1	5883	6013	(160)	490289
2097	8.8	0.6	17.6	chr10	80108676	80109090	(53688332)	+	LTR14A	LTR/ERVK	1	344	(0)	490655
817	9.8	18.0	0.0	chr10	80109093	80109215	(53688207)	C	AluSg	SINE/Alu	(160)	150	1	490656
241	30.6	15.6	6.4	chr10	80109333	80109422	(53688000)	+	MIR3	SINE/MIR	20	115	(153)	490657
2011	10.0	8.8	10.4	chr10	80367225	80367640	(53429782)	C	LTR14B	LTR/ERVK	(0)	608	1	491095
334	24.5	3.9	8.4	chr10	83764626	83764732	(50032690)	+	MER65D	LTR/ERV1	2	103	(428)	495834
424	28.5	8.3	5.1	chr10	83764753	83765122	(50032300)	+	MER65D	LTR/ERV1	66	473	(0)	495834
21242	10.2	1.3	2.0	chr10	84409747	84412530	(49384892)	C	L1PA11	LINE/L1	(0)	6359	3606	496830
2600	6.2	1.4	0.3	chr10	84412531	84412870	(49384552)	C	LTR14A	LTR/ERVK	(0)	344	1	496831
21242	14.6	3.5	2.0	chr10	84412871	84416401	(49381021)	C	L1PA11	LINE/L1	(2726)	3605	4	496830
2014	11.9	1.8	17.6	chr10	84684448	84684856	(49112566)	+	LTR14B	LTR/ERVK	2	608	(0)	497209
409	31.7	1.8	3.0	chr10	86632679	86632847	(47164575)	C	Charlie17a	DNA/hAT-Charlie	(4)	213	47	499898
417	30.5	3.4	2.8	chr10	87851437	87851581	(45945841)	+	MIR3	SINE/MIR	40	185	(23)	501910
442	25.4	6.2	3.2	chr10	88811204	88811329	(44986093)	C	MIRb	SINE/MIR	(37)	231	102	503401
210	34.0	3.0	1.0	chr10	88811361	88811458	(44985964)	C	MIRb	SINE/MIR	(3)	265	166	503402
3042	30.1	7.6	2.1	chr10	89155820	89157079	(44640343)	C	L2	LINE/L2	(753)	2666	1332	503955
241	33.0	4.8	2.5	chr10	89260283	89260403	(44537019)	C	L2b	LINE/L2	(8)	3367	3244	504114
181	23.5	3.4	10.5	chr10	89261058	89261152	(44536270)	C	L2c	LINE/L2	(1)	3386	3299	504115
5662	14.1	1.5	0.1	chr10	89299640	89300561	(44496861)	+	L1MA4A	LINE/L1	5363	6297	(6)	504172
615	33.8	7.6	5.7	chr10	90438333	90438768	(43358654)	C	L2c	LINE/L2	(19)	3368	2924	505853
20	3.3	3.2	0.0	chr10	91162295	91162325	(42635097)	+	(GGTGG)n	Simple_repeat	1	32	(0)	506907
55	3.7	0.0	0.0	chr10	91609148	91609203	(42188219)	+	(TC)n	Simple_repeat	1	56	(0)	507574
278	8.9	2.2	0.0	chr10	91708076	91708120	(42089302)	+	MLT2B4	LTR/ERVL	1	46	(510)	507735
374	30.3	8.0	4.4	chr10	91708124	91708461	(42088961)	C	L1ME4a	LINE/L1	(6234)	869	519	507729
554	36.8	6.1	6.8	chr10	91708520	91708918	(42088504)	C	L1ME4a	LINE/L1	(6679)	424	29	507729
885	28.4	2.0	5.4	chr10	91899437	91899749	(41897673)	+	LTR16B1	LTR/ERVL	13	314	(166)	508047
247	32.7	11.6	0.9	chr10	91899878	91899985	(41897437)	C	L3b	LINE/CR1	(426)	3673	3553	508044
575	33.5	7.7	4.9	chr10	92627377	92627987	(41169435)	C	HAL1	LINE/L1	(1351)	1156	495	509551
303	25.7	0.0	0.0	chr10	92628069	92628138	(41169284)	+	MER20	DNA/hAT-Charlie	18	87	(132)	509552
419	18.4	10.3	0.0	chr10	92628133	92628219	(41169203)	+	MER20	DNA/hAT-Charlie	123	219	(0)	509553
521	20.1	11.0	1.9	chr10	94080795	94080951	(39716471)	C	L1ME3Cz	LINE/L1	(8)	989	817	512341
518	25.8	7.2	3.8	chr10	94081022	94081500	(39715922)	C	L1ME3G	LINE/L1	(697)	227	6	512333
1564	19.9	13.6	1.2	chr10	95456247	95456592	(38340830)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	514299
610	31.4	9.1	9.6	chr10	96425294	96427791	(37369631)	C	L1ME4b	LINE/L1	(1457)	4757	2271	515937
2706	5.9	0.6	0.0	chr10	96787069	96787405	(37010017)	+	LTR14A	LTR/ERVK	6	344	(0)	516682
271	20.2	2.4	2.4	chr10	96787406	96787446	(37009976)	C	FLAM_C	SINE/Alu	(260)	41	1	516683
627	28.3	2.3	2.6	chr10	96787452	96787716	(37009706)	C	L1ME3G	LINE/L1	(320)	604	341	516684
2428	12.0	5.7	1.5	chr10	97219007	97219412	(36578010)	+	Tigger2a	DNA/TcMar-Tigger	11	434	(0)	517497
2191	11.4	0.3	0.0	chr10	97342474	97342770	(36454652)	C	AluSz	SINE/Alu	(14)	298	1	517764
335	35.5	11.1	5.7	chr10	101013260	101013573	(32783849)	C	L2b	LINE/L2	(5)	3370	3038	524327
3342	22.2	4.3	3.5	chr10	103180735	103181209	(30616213)	+	L1ME1	LINE/L1	5688	6173	(6)	528350
675	17.4	0.0	6.5	chr10	103181212	103181349	(30616073)	+	FLAM_C	SINE/Alu	2	130	(13)	528359
2364	10.1	0.0	0.0	chr10	103847657	103847952	(29949470)	+	AluSz6	SINE/Alu	1	296	(16)	529762
22	16.6	2.1	0.0	chr10	103848195	103848241	(29949181)	+	(TCC)n	Simple_repeat	1	48	(0)	529763
2156	21.3	16.1	3.2	chr10	103983439	103984127	(29813295)	+	LTR50	LTR/ERVL	1	795	(0)	530025
273	22.7	15.1	11.3	chr10	103984128	103984172	(29813250)	+	MIR	SINE/MIR	180	224	(38)	530024
270	25.4	1.6	0.0	chr10	104046995	104047057	(29750365)	C	Charlie4z	DNA/hAT-Charlie	(0)	167	104	530099
1775	24.6	6.8	3.4	chr10	104139064	104139935	(29657487)	+	L1MCa	LINE/L1	1652	2613	(4409)	530223
616	30.4	6.4	8.0	chr10	104155576	104155911	(29641511)	C	L2a	LINE/L2	(172)	3254	2925	530256
316	26.5	8.6	2.7	chr10	104156038	104156223	(29641199)	+	L1MC4	LINE/L1	419	616	(5599)	530257
21	17.2	3.9	0.0	chr10	106809120	106809171	(26988251)	+	(TTTTGT)n	Simple_repeat	1	54	(0)	534310
15	7.2	0.0	8.6	chr10	106809208	106809242	(26988180)	+	(AAT)n	Simple_repeat	1	35	(0)	534311
1886	16.2	3.6	2.2	chr10	107004305	107004663	(26792759)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	534620
14	24.1	0.0	0.0	chr10	107004851	107004889	(26792533)	+	(GTGTGT)n	Simple_repeat	1	39	(0)	534621
317	25.5	1.1	1.1	chr10	107005069	107005163	(26792259)	+	L1ME4a	LINE/L1	5631	5725	(399)	534622
436	25.6	5.0	5.6	chr10	107095381	107095660	(26701762)	+	MamGypLTR2c	LTR/Gypsy	632	1039	(29)	534777
1332	26.7	9.9	5.5	chr10	110330313	110330645	(23466777)	C	L2a	LINE/L2	(620)	2799	2452	539274
2669	6.2	1.2	0.3	chr10	110330646	110330986	(23466436)	+	LTR14A	LTR/ERVK	1	344	(0)	539276
1332	26.7	9.9	5.5	chr10	110330987	110331064	(23466358)	C	L2a	LINE/L2	(968)	2451	2374	539274
1216	16.3	0.8	5.0	chr10	110331081	110331270	(23466152)	C	MLT1B	LTR/ERVL-MaLR	(48)	342	163	539277
314	19.8	11.3	16.5	chr10	110883531	110883718	(22913704)	C	L1MC5	LINE/L1	(4)	9300	9124	540319
15	16.9	6.2	2.0	chr10	110883802	110883849	(22913573)	+	(GTAT)n	Simple_repeat	1	51	(0)	540320
1452	19.5	1.5	4.0	chr10	110883999	110884271	(22913151)	+	Tigger7	DNA/TcMar-Tigger	2	267	(2224)	540321
12	20.3	2.9	0.0	chr10	111128886	111128920	(22668502)	+	(TCCCCCC)n	Simple_repeat	1	36	(0)	540646
423	31.6	12.0	5.9	chr10	111457623	111458012	(22339410)	C	L2c	LINE/L2	(47)	3340	2924	541148
36	0.0	0.0	0.0	chr10	111458100	111458130	(22339292)	+	(GT)n	Simple_repeat	1	31	(0)	541149
2230	13.2	8.2	0.3	chr10	111481213	111481539	(22315883)	C	LTR18A	LTR/ERVL	(0)	357	3	541187
282	22.9	3.2	0.0	chr10	112120448	112120508	(21676914)	+	MLT1K	LTR/ERVL-MaLR	533	595	(0)	542167
3853	8.6	8.4	3.6	chr10	112226488	112227065	(21570357)	C	LTR14B	LTR/ERVK	(0)	608	1	542316
504	21.2	14.3	2.2	chr10	112249038	112249220	(21548202)	C	Charlie23a	DNA/hAT-Charlie	(116)	223	15	542347
254	34.3	3.7	0.9	chr10	112249267	112249372	(21548050)	C	MIR1_Amn	SINE/MIR	(102)	128	20	542348
345	32.8	10.4	0.0	chr10	112308561	112308749	(21488673)	C	MIR	SINE/MIR	(0)	262	52	542441
4546	26.5	5.8	4.6	chr10	113213339	113214402	(20583020)	C	L1ME4a	LINE/L1	(3246)	2900	1823	543902
2378	17.9	1.6	4.1	chr10	113214403	113214844	(20582578)	+	MSTB1	LTR/ERVL-MaLR	2	432	(0)	543925
246	35.1	1.1	0.0	chr10	113970792	113970885	(19826537)	+	MIR3	SINE/MIR	90	184	(24)	545167
21	15.9	0.0	0.0	chr10	114173880	114173921	(19623501)	+	(CTCGCC)n	Simple_repeat	1	42	(0)	545512
270	29.1	12.0	0.8	chr10	117690673	117690790	(16106632)	+	MIR	SINE/MIR	2	134	(128)	550903
667	29.8	4.2	6.8	chr10	120489534	120489828	(13307594)	C	MER102b	DNA/hAT-Charlie	(48)	293	7	555736
2155	11.9	4.3	0.0	chr10	121389485	121389820	(12407602)	+	L1MB3	LINE/L1	5578	5928	(255)	557079
1980	14.8	4.0	3.4	chr10	121389821	121390171	(12407251)	+	MLT1A0	LTR/ERVL-MaLR	1	353	(12)	557080
16	0.0	0.0	0.0	chr10	121734679	121734696	(12062726)	+	(A)n	Simple_repeat	1	18	(0)	557639
1170	3.8	0.0	0.0	chr10	121987615	121987745	(11809677)	C	AluSg4	SINE/Alu	(179)	131	1	558087
1819	16.6	9.8	1.1	chr10	121987746	121988099	(11809323)	+	LTR8B	LTR/ERV1	427	814	(6)	558086
1446	21.8	14.7	0.5	chr10	122499069	122499493	(11297929)	+	MER45C	DNA/hAT-Tip100	458	953	(0)	558971
350	26.5	4.1	0.0	chr10	122499494	122499610	(11297812)	+	L2	LINE/L2	1005	1126	(2293)	558969
3039	11.6	9.3	6.0	chr10	122763331	122763901	(11033521)	C	LTR14B	LTR/ERVK	(0)	608	17	559307
12	15.3	3.5	0.0	chr10	124179124	124179152	(9618270)	+	A-rich	Low_complexity	1	30	(0)	561482
1548	23.6	10.7	5.1	chr10	124179588	124180038	(9617384)	C	FordPrefect_a	DNA/hAT-Tip100	(25)	483	5	561483
16	15.7	10.4	3.5	chr10	125141568	125141644	(8655778)	+	(CAGAAGCA)n	Simple_repeat	1	85	(0)	563029
2077	27.4	6.5	2.7	chr10	125885745	125886441	(7910981)	+	L2a	LINE/L2	2614	3340	(86)	564143
1636	19.7	2.4	1.4	chr10	125917802	125918095	(7879327)	+	AluJo	SINE/Alu	2	298	(14)	564212
1265	13.4	1.5	9.3	chr10	125918096	125918275	(7879147)	+	L1MB3	LINE/L1	5974	6143	(40)	564208
2261	11.4	0.0	0.0	chr10	126002031	126002329	(7795093)	+	AluSx3	SINE/Alu	1	299	(12)	564327
575	30.6	5.7	6.3	chr10	126002639	126003237	(7794185)	C	L1MC4	LINE/L1	(0)	8042	7799	564328
2343	20.6	8.2	1.3	chr10	126120174	126120772	(7676650)	C	LTR48B	LTR/ERV1	(0)	644	1	564456
272	11.2	9.6	2.7	chr10	126120865	126121582	(7675840)	+	(AT)n	Simple_repeat	1	767	(0)	564457
623	32.3	0.4	7.6	chr10	126376856	126377015	(7420407)	C	MIR	SINE/MIR	(18)	244	89	564768
490	22.9	2.8	0.0	chr10	126377016	126377120	(7420302)	C	MER81	DNA/hAT-Blackjack	(2)	112	5	564769
623	32.3	0.4	7.6	chr10	126377121	126377210	(7420212)	C	MIR	SINE/MIR	(174)	88	12	564768
3386	7.9	4.9	1.1	chr10	126377222	126377654	(7419768)	C	MLT2A2	LTR/ERVL	(2)	451	2	564770
17	26.8	0.0	0.0	chr10	128174571	128174611	(5622811)	+	GA-rich	Low_complexity	1	41	(0)	567120
4613	6.2	4.0	0.3	chr10	128174685	128175270	(5622152)	C	LTR14B	LTR/ERVK	(0)	608	1	567121
985	24.6	12.8	7.2	chr10	128363173	128363605	(5433817)	+	MLT1C	LTR/ERVL-MaLR	7	467	(0)	567340
414	19.6	7.8	0.9	chr10	130189445	130189552	(3607870)	C	MER115	DNA/hAT-Tip100	(69)	624	509	569235
247	20.9	5.6	0.0	chr10	130891427	130891493	(2905929)	+	L1MD3	LINE/L1	7925	7995	(0)	570017
879	29.4	5.2	0.8	chr10	131824765	131825224	(1972198)	C	LTR53	LTR/ERVL	(0)	519	17	570982
275	27.0	0.0	0.4	chr10	131890209	131890912	(1906510)	+	(AC)n	Simple_repeat	1	704	(0)	571043
850	24.4	15.9	0.0	chr10	131891119	131891541	(1905881)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	571044
6251	12.5	0.9	2.0	chr10	132261251	132261482	(1535940)	+	L1PA16	LINE/L1	4258	4486	(1660)	571457
203	38.2	3.7	0.6	chr10	132936796	132936953	(860469)	+	L2	LINE/L2	2322	2484	(935)	572059
30	7.5	0.0	0.0	chr10	132965825	132965867	(831555)	+	(GTGTTTACAT)n	Simple_repeat	1	43	(0)	572085
660	14.3	9.5	0.0	chr10	133342841	133342945	(454477)	+	AluJo	SINE/Alu	1	116	(196)	572414
531	29.8	27.3	1.5	chr10	133342947	133343453	(453969)	C	L1M4a2	LINE/L1	(1604)	1052	393	572415
3831	10.2	2.0	6.3	chr10	133603540	133604156	(193266)	+	LTR14B	LTR/ERVK	16	605	(3)	572682
643	19.3	0.0	0.0	chr10	133604160	133604268	(193154)	+	HERVK14-int	LTR/ERVK	1	109	(5987)	572682
29197	10.0	1.2	0.1	chr10	133604269	133608205	(189217)	+	HERVK14-int	LTR/ERVK	1163	5143	(953)	572682
3631	10.7	2.7	6.4	chr10	133609355	133609963	(187459)	+	LTR14B	LTR/ERVK	17	602	(6)	572683
7795	7.3	0.5	1.4	chr10	133609964	133610941	(186481)	+	LTR5A	LTR/ERVK	1	969	(64)	572684
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
12	12.6	0.0	3.6	chr11	551097	551124	(134535498)	+	(CCTCC)n	Simple_repeat	1	28	(0)	573554
14	23.3	6.8	2.5	chr11	694230	694303	(134392319)	+	G-rich	Low_complexity	1	79	(0)	573780
2490	8.1	0.0	0.0	chr11	841618	841924	(134244698)	+	AluSx	SINE/Alu	2	308	(4)	574011
1632	19.2	0.7	3.1	chr11	841925	842047	(134244575)	C	AluJb	SINE/Alu	(188)	124	1	574010
13	28.7	0.0	0.0	chr11	1017643	1017684	(134068938)	+	(TGG)n	Simple_repeat	1	42	(0)	574242
655	23.8	17.6	1.0	chr11	1353797	1354103	(133732519)	+	MLT1A0	LTR/ERVL-MaLR	3	374	(16)	574517
2285	10.3	0.7	0.0	chr11	1978472	1978773	(133107849)	+	AluSp	SINE/Alu	3	306	(7)	575303
2294	13.6	11.7	0.3	chr11	2486548	2486924	(132599698)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	575856
745	25.9	9.1	1.6	chr11	2857536	2857849	(132228773)	+	MER34C2	LTR/ERV1	216	555	(0)	576216
1642	14.9	5.4	0.0	chr11	2918718	2918978	(132167644)	C	AluJb	SINE/Alu	(20)	292	17	576312
369	24.3	7.7	1.7	chr11	2919059	2919230	(132167392)	C	MLT1K	LTR/ERVL-MaLR	(245)	350	168	576313
19	0.0	0.0	0.0	chr11	5011616	5011636	(130074986)	+	(A)n	Simple_repeat	1	21	(0)	579504
384	20.3	0.0	0.0	chr11	6203158	6203231	(128883391)	C	L1PB4	LINE/L1	(0)	6156	6083	580950
630	26.9	13.9	4.1	chr11	6577309	6577599	(128509023)	+	LTR81C	LTR/Gypsy	827	1150	(3)	581529
181	20.5	0.0	0.0	chr11	9381125	9381163	(125705459)	C	L2b	LINE/L2	(12)	3375	3337	585662
2419	10.7	0.7	0.0	chr11	9392667	9392965	(125693657)	+	AluSz6	SINE/Alu	1	301	(11)	585697
232	30.2	3.0	1.0	chr11	9393075	9393171	(125693451)	C	L2	LINE/L2	(971)	2448	2350	585698
650	30.1	13.0	4.0	chr11	10366413	10366492	(124720130)	C	L1M5	LINE/L1	(2459)	3687	3593	587450
1586	24.5	9.9	1.4	chr11	10428801	10429242	(124657380)	C	LTR33	LTR/ERVL	(31)	484	1	587545
1587	21.0	9.6	6.8	chr11	11970478	11970963	(123115659)	+	MLT1D	LTR/ERVL-MaLR	3	503	(2)	590011
649	31.4	5.3	2.5	chr11	13062548	13062822	(122023800)	+	L2	LINE/L2	2	284	(3135)	591750
817	25.6	8.8	2.9	chr11	13062828	13063105	(122023517)	+	L2a	LINE/L2	3125	3420	(6)	591751
389	22.9	3.5	0.0	chr11	13667822	13667930	(121418692)	C	L1ME3	LINE/L1	(45)	6117	6005	592644
318	16.4	1.6	3.2	chr11	15722720	15722782	(119363840)	+	L2a	LINE/L2	3301	3362	(64)	596003
1287	26.9	10.8	0.3	chr11	15722906	15723278	(119363344)	C	LTR16A	LTR/ERVL	(0)	451	35	596004
1998	16.7	7.2	0.0	chr11	16684788	16685158	(118401464)	C	MSTA	LTR/ERVL-MaLR	(28)	400	1	597296
8381	17.3	4.8	3.1	chr11	16685159	16686779	(118399843)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1651	1	597296
521	29.8	8.4	2.4	chr11	17402761	17402973	(117683649)	+	MIRb	SINE/MIR	3	229	(39)	598680
349	25.0	0.0	8.7	chr11	17722388	17722514	(117364108)	C	MER5B	DNA/hAT-Charlie	(59)	119	4	599205
662	29.2	9.4	4.1	chr11	18192933	18193275	(116893347)	C	LTR33	LTR/ERVL	(10)	505	143	600033
250	32.2	11.2	6.2	chr11	19937799	19938152	(115148470)	C	L2c	LINE/L2	(79)	3308	2935	603095
582	29.9	5.9	2.1	chr11	19938314	19938638	(115147984)	C	MER102b	DNA/hAT-Charlie	(2)	339	2	603096
311	33.4	5.0	8.1	chr11	20272414	20272831	(114813791)	+	L2a	LINE/L2	3003	3426	(0)	603643
717	19.8	5.8	11.9	chr11	22893158	22893358	(112193264)	+	MER20	DNA/hAT-Charlie	32	219	(0)	607597
21681	7.0	0.4	0.4	chr11	28157125	28159885	(106926737)	+	HERVL-int	LTR/ERVL	2893	5654	(0)	615135
220	34.9	10.9	4.4	chr11	30388663	30388935	(104697687)	+	L2c	LINE/L2	3051	3343	(44)	618390
43	2.3	2.2	0.0	chr11	30584342	30584386	(104502236)	+	(AC)n	Simple_repeat	1	46	(0)	618700
536	24.8	4.7	5.7	chr11	31186717	31187030	(103899592)	+	LTR16D	LTR/ERVL	259	651	(0)	619607
425	16.2	12.1	0.0	chr11	31187149	31187228	(103899394)	+	L2a	LINE/L2	3334	3424	(2)	619608
1544	17.6	0.7	6.2	chr11	31515374	31515663	(103570959)	+	AluJo	SINE/Alu	9	282	(30)	620077
758	29.1	11.2	4.3	chr11	31754071	31754587	(103332035)	+	L2a	LINE/L2	2638	3192	(234)	620390
30	14.9	1.4	4.1	chr11	36149834	36149905	(98936717)	+	(CTCATGA)n	Simple_repeat	1	73	(0)	627946
38	0.0	0.0	0.0	chr11	36165945	36165979	(98920643)	+	(CCTC)n	Simple_repeat	1	35	(0)	627976
27	15.6	0.0	4.8	chr11	36165980	36166042	(98920580)	+	(TCCT)n	Simple_repeat	1	63	(0)	627977
25	21.4	0.0	0.0	chr11	36309951	36310005	(98776617)	+	(CCA)n	Simple_repeat	1	55	(0)	628227
1558	17.7	3.4	0.0	chr11	37748198	37748514	(97338108)	+	L1MA3	LINE/L1	4103	4430	(3135)	630290
1914	12.6	0.9	17.4	chr11	37748521	37748933	(97337689)	C	LTR14B	LTR/ERVK	(0)	608	1	630291
4207	8.6	3.8	0.3	chr11	41164691	41165274	(93921348)	+	LTR14B	LTR/ERVK	4	608	(0)	635007
6021	16.2	3.0	4.8	chr11	41165275	41165335	(93921287)	C	Tigger3b	DNA/TcMar-Tigger	(1165)	66	12	635002
6772	8.1	1.2	7.6	chr11	41304229	41305921	(93780701)	+	SVA_F	Retroposon/SVA	389	1375	(0)	635215
985	12.5	0.0	17.9	chr11	41305799	41306022	(93780600)	+	LTR5_Hs	LTR/ERVK	694	877	(91)	635216
18	4.8	0.0	0.0	chr11	41306023	41306044	(93780578)	+	(A)n	Simple_repeat	1	22	(0)	635217
505	20.2	0.0	0.0	chr11	41306046	41306144	(93780478)	C	MER96B	DNA/hAT-Tip100	(305)	112	14	635218
316	34.2	4.0	3.2	chr11	44382818	44383065	(90703557)	+	LTR103b_Mam	LTR/ERV1?	292	541	(7)	640017
618	13.2	10.1	0.9	chr11	45815639	45815767	(89270855)	C	MSTA1	LTR/ERVL-MaLR	(281)	147	1	642830
224	21.5	3.1	6.0	chr11	45918586	45918696	(89167926)	+	MIR3	SINE/MIR	86	185	(23)	643018
15	13.1	0.0	5.4	chr11	45919075	45919111	(89167511)	+	(TTTTAA)n	Simple_repeat	1	37	(0)	643019
19	10.4	0.0	0.0	chr11	46120986	46121016	(88965606)	+	(GAG)n	Simple_repeat	1	31	(0)	643311
21	8.9	2.8	0.0	chr11	46121048	46121083	(88965539)	+	(GCT)n	Simple_repeat	1	37	(0)	643312
13	5.0	0.0	4.3	chr11	46121133	46121155	(88965467)	+	(CCT)n	Simple_repeat	1	23	(0)	643313
37	4.3	4.2	0.0	chr11	46121156	46121203	(88965419)	+	(CT)n	Simple_repeat	1	50	(0)	643314
16	21.7	0.0	0.0	chr11	46121236	46121267	(88965355)	+	G-rich	Low_complexity	1	32	(0)	643315
13	8.9	0.0	3.9	chr11	46121400	46121425	(88965197)	+	(CAG)n	Simple_repeat	1	26	(0)	643316
21	25.1	4.2	3.0	chr11	46121485	46121519	(88965103)	+	(CGCCCG)n	Simple_repeat	1	94	(0)	643317
26	7.9	7.3	1.7	chr11	46121520	46121574	(88965048)	+	(CCG)n	Simple_repeat	1	59	(0)	643318
509	27.7	2.3	1.9	chr11	46355456	46355627	(88730995)	C	MIRc	SINE/MIR	(55)	213	41	643828
2402	8.3	0.7	0.0	chr11	46355744	46356044	(88730578)	C	AluSp	SINE/Alu	(10)	303	1	643829
1708	15.8	6.4	2.4	chr11	47121803	47122091	(87964531)	+	AluJo	SINE/Alu	1	304	(8)	645287
33	0.0	0.0	0.0	chr11	47122092	47122119	(87964503)	+	(AT)n	Simple_repeat	1	28	(0)	645288
13	19.2	0.0	0.0	chr11	47122473	47122502	(87964120)	+	(CCTG)n	Simple_repeat	1	30	(0)	645289
819	16.7	2.7	8.9	chr11	55575816	55576051	(79510571)	C	MER4B-int	LTR/ERV1	(4539)	2219	1999	651125
2922	13.9	5.4	9.4	chr11	55576053	55576655	(79509967)	C	LTR14B	LTR/ERVK	(0)	608	32	651126
12	20.2	0.0	6.7	chr11	57326841	57326885	(77759737)	+	(TTACTT)n	Simple_repeat	1	45	(0)	653467
190	28.3	3.2	0.0	chr11	57396194	57396253	(77690369)	C	MIR3	SINE/MIR	(18)	190	129	653601
460	30.6	3.2	5.8	chr11	57396659	57396915	(77689707)	+	L2a	LINE/L2	3125	3374	(52)	653602
891	18.1	0.0	0.0	chr11	59771235	59771367	(75315255)	+	AluJb	SINE/Alu	140	272	(40)	657417
19	18.9	0.0	0.0	chr11	59771386	59771421	(75315201)	+	(C)n	Simple_repeat	1	36	(0)	657418
277	9.5	0.0	0.0	chr11	61689465	61689506	(73397116)	+	MIRc	SINE/MIR	94	135	(133)	660693
5726	22.1	8.6	8.3	chr11	61994930	61995583	(73091039)	C	L1MC5	LINE/L1	(1988)	7316	6615	661222
18	27.6	3.9	2.5	chr11	62471829	62471936	(72614686)	+	GA-rich	Low_complexity	1	109	(0)	662166
542	28.6	7.9	1.2	chr11	62605377	62605542	(72481080)	+	MamRep38	DNA/hAT	103	280	(15)	662391
625	29.9	13.6	2.1	chr11	62889212	62889536	(72197086)	C	L2a	LINE/L2	(2)	3424	3057	663048
865	23.3	16.6	1.6	chr11	62889665	62890031	(72196591)	C	MER77B	LTR/ERVL	(23)	677	245	663049
12	28.9	0.0	3.7	chr11	63614513	63614566	(71472056)	+	(CCCGGC)n	Simple_repeat	1	54	(0)	664007
474	19.6	6.7	0.0	chr11	63829835	63829946	(71256676)	+	L2b	LINE/L2	3249	3368	(7)	664496
1975	17.2	7.1	0.5	chr11	63921887	63922254	(71164368)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	664651
1111	29.3	7.7	0.3	chr11	64180853	64181225	(70905397)	C	L2b	LINE/L2	(793)	2626	2224	665127
33	0.0	0.0	0.0	chr11	64330315	64330345	(70756277)	+	(ACAAA)n	Simple_repeat	1	31	(0)	665400
14	25.3	3.4	5.4	chr11	64330346	64330418	(70756204)	+	(GGAGT)n	Simple_repeat	4	75	(0)	665401
660	29.1	2.3	5.4	chr11	64330564	64330684	(70755938)	+	MIR	SINE/MIR	41	162	(100)	665402
2135	31.0	5.6	4.2	chr11	64456477	64457540	(70629082)	+	ERV3-16A3_I-int	LTR/ERVL	3700	4786	(440)	665651
13	21.4	2.6	0.0	chr11	64864543	64864580	(70222042)	+	(AGCCCGC)n	Simple_repeat	1	39	(0)	666358
615	25.9	9.5	5.1	chr11	65486691	65486909	(69599713)	+	MIRb	SINE/MIR	30	265	(3)	667645
384	29.0	4.3	3.1	chr11	65486974	65487133	(69599489)	C	MIR3	SINE/MIR	(6)	202	41	667646
230	34.5	9.6	0.0	chr11	65487241	65487382	(69599240)	C	MIRc	SINE/MIR	(22)	246	90	667647
893	21.9	3.8	2.4	chr11	65775063	65775272	(69311350)	+	L1M5	LINE/L1	5579	5791	(403)	668161
487	24.5	10.3	9.6	chr11	65775372	65775785	(69310837)	+	LTR67B	LTR/ERVL	97	617	(3)	668162
688	3.9	0.0	0.0	chr11	65938748	65938825	(69147797)	C	AluSz	SINE/Alu	(234)	78	1	668486
323	21.7	11.7	2.8	chr11	65938828	65938936	(69147686)	+	LTR78	LTR/ERV1	1071	1190	(114)	668487
309	31.8	12.5	0.0	chr11	66328573	66328698	(68757924)	C	L2a	LINE/L2	(2)	3424	3281	669254
4154	14.0	5.2	5.4	chr11	66942419	66942730	(68143892)	+	L1MB3	LINE/L1	5831	6142	(41)	670534
2406	7.4	0.0	0.3	chr11	67094614	67094911	(67991711)	+	AluY	SINE/Alu	1	297	(14)	670940
381	29.1	3.6	5.5	chr11	68256181	68256380	(66830242)	C	L1MC5a	LINE/L1	(3)	2774	2579	673083
8095	17.2	2.3	3.4	chr11	68303793	68305073	(66781549)	+	MSTA-int	LTR/ERVL-MaLR	375	1651	(0)	673178
2173	16.5	7.7	2.5	chr11	68305074	68305436	(66781186)	+	MSTA	LTR/ERVL-MaLR	1	393	(35)	673178
1454	20.1	12.8	3.5	chr11	69164878	69165420	(65921202)	+	MER77	LTR/ERVL	2	679	(21)	674621
12	20.9	0.0	2.8	chr11	69165432	69165467	(65921155)	+	(TTCCTC)n	Simple_repeat	1	36	(0)	674622
319	35.1	5.0	3.1	chr11	69165470	69165663	(65920959)	C	L1ME4b	LINE/L1	(48)	844	647	674623
250	22.5	1.9	0.0	chr11	70118302	70118361	(64968261)	C	L2b	LINE/L2	(0)	3387	3326	676294
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
20	28.7	2.7	0.0	chr11	72758941	72759064	(62327558)	+	(GTGTAT)n	Simple_repeat	1	127	(0)	680529
70	0.0	0.0	0.0	chr11	73142812	73142871	(61943751)	+	(GT)n	Simple_repeat	1	60	(0)	681263
1779	15.1	0.0	6.3	chr11	73938622	73938794	(61147828)	+	AluJb	SINE/Alu	135	299	(13)	683080
3859	9.7	2.3	6.7	chr11	73938890	73939521	(61147101)	C	LTR14B	LTR/ERVK	(0)	608	5	683082
21322	9.7	1.9	0.2	chr11	73943577	73946851	(61139771)	C	HERVK14-int	LTR/ERVK	(2732)	3364	1	683083
3503	12.4	1.0	5.8	chr11	73946852	73947474	(61139148)	C	LTR14B	LTR/ERVK	(0)	608	16	683083
6387	13.1	9.3	0.3	chr11	74826505	74827592	(60259030)	C	THE1D-int	LTR/ERVL-MaLR	(1)	1630	435	684895
332	28.6	15.1	4.7	chr11	76149931	76150231	(58936391)	C	L2a	LINE/L2	(1407)	2012	1675	687414
333	29.7	11.2	5.2	chr11	76159892	76160083	(58926539)	C	MIRc	SINE/MIR	(20)	248	44	687427
225	33.0	11.1	0.0	chr11	76170936	76171023	(58915599)	C	MIR3	SINE/MIR	(87)	175	77	687445
1395	24.6	3.4	4.2	chr11	76489905	76490257	(58596365)	C	L1MEc	LINE/L1	(3925)	2475	2134	688113
683	22.7	9.3	7.2	chr11	76490258	76490466	(58596156)	C	MER20	DNA/hAT-Charlie	(1)	218	5	688115
1395	24.6	3.3	4.2	chr11	76490467	76490690	(58595932)	C	L1MEc	LINE/L1	(4267)	2133	1907	688113
4447	14.1	2.8	1.8	chr11	76605467	76606173	(58480449)	+	MER50	LTR/ERV1	1	714	(20)	688317
520	29.2	15.1	10.7	chr11	76606181	76606813	(58479809)	+	L2a	LINE/L2	2025	2776	(643)	688318
378	31.5	7.7	5.4	chr11	76823811	76824040	(58262582)	+	MIRc	SINE/MIR	7	235	(27)	688741
329	30.6	16.8	2.6	chr11	76824101	76824394	(58262228)	C	L2b	LINE/L2	(2)	3373	3020	688742
288	29.3	7.2	5.7	chr11	77197188	77197310	(57889312)	+	L2c	LINE/L2	3261	3385	(2)	689424
12	18.3	5.4	0.0	chr11	77473468	77473504	(57613118)	+	(CCCCA)n	Simple_repeat	1	39	(0)	689964
13	8.9	0.0	3.9	chr11	77473569	77473594	(57613028)	+	(CTC)n	Simple_repeat	1	26	(0)	689965
19	23.4	6.7	2.1	chr11	77473720	77473808	(57612814)	+	G-rich	Low_complexity	1	95	(0)	689966
578	13.6	12.0	0.1	chr11	77788789	77788896	(57297726)	+	L1M2	LINE/L1	719	827	(6739)	690603
414	22.9	1.3	0.0	chr11	77788904	77789011	(57297611)	+	FLAM_C	SINE/Alu	13	122	(11)	690604
4739	25.5	5.8	4.4	chr11	77789034	77790099	(57296523)	+	L1M2	LINE/L1	822	1921	(5645)	690603
1998	18.1	2.8	7.2	chr11	78454243	78454624	(56631998)	+	MSTB	LTR/ERVL-MaLR	1	391	(35)	692049
300	31.6	2.9	7.4	chr11	78813234	78813489	(56273133)	+	L2c	LINE/L2	3053	3296	(91)	692702
247	25.4	8.1	0.0	chr11	83104795	83104908	(51981714)	C	L1ME3B	LINE/L1	(0)	6173	6050	700045
542	10.8	2.4	0.0	chr11	83104911	83104993	(51981629)	+	LSU-rRNA_Hsa	rRNA	4950	5034	(1)	700046
1993	24.7	10.9	3.0	chr11	83105027	83106477	(51980145)	C	L1ME3B	LINE/L1	(176)	6066	4475	700045
212	37.7	0.0	2.5	chr11	84894972	84895050	(50191572)	+	MIR3	SINE/MIR	34	110	(158)	703081
12016	16.1	4.0	2.5	chr11	85565345	85566416	(49520206)	C	L1MB7	LINE/L1	(20)	6662	5563	704034
1443	21.2	7.1	1.2	chr11	85566417	85566759	(49519863)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	704035
12016	17.9	4.8	1.3	chr11	85566760	85568014	(49518608)	C	L1MB7	LINE/L1	(1082)	5562	4265	704034
318	20.6	14.9	0.0	chr11	86291609	86291705	(48794917)	+	MER58B	DNA/hAT-Charlie	228	341	(0)	705308
28	10.6	0.0	0.0	chr11	86291906	86291946	(48794676)	+	(A)n	Simple_repeat	1	41	(0)	705309
506	28.3	0.8	0.0	chr11	86292207	86292326	(48794296)	C	L2a	LINE/L2	(6)	3420	3300	705310
2490	14.0	4.2	1.4	chr11	87176066	87176485	(47910137)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	706753
272	25.4	1.7	0.0	chr11	87925332	87925390	(47161232)	C	L2a	LINE/L2	(0)	3426	3367	707834
448	32.9	6.3	1.8	chr11	87925694	87925919	(47160703)	+	L3	LINE/CR1	3846	4082	(17)	707835
4240	6.7	4.1	0.5	chr11	90455348	90455930	(44630692)	+	LTR14B	LTR/ERVK	4	608	(0)	711472
9430	10.8	3.3	1.9	chr11	90455931	90456410	(44630212)	+	L1PA16	LINE/L1	4802	5278	(868)	711471
592	29.4	0.8	3.5	chr11	92463328	92463584	(42623038)	+	MIR	SINE/MIR	1	250	(12)	714195
248	31.4	4.2	2.1	chr11	92463601	92463740	(42622882)	C	MER5A	DNA/hAT-Charlie	(23)	166	24	714196
362	36.4	5.5	5.1	chr11	92463784	92464020	(42622602)	+	MIRb	SINE/MIR	23	260	(8)	714197
1912	24.7	12.5	0.9	chr11	93340089	93340885	(41745737)	C	L2a	LINE/L2	(102)	3324	2407	715456
2121	8.1	8.0	2.8	chr11	93571485	93571767	(41514855)	+	AluSc8	SINE/Alu	1	299	(12)	715781
192	35.4	6.3	6.3	chr11	93571768	93571781	(41514841)	C	L2b	LINE/L2	(224)	3202	3189	715780
451	30.1	7.0	4.0	chr11	93571856	93572132	(41514490)	C	L2b	LINE/L2	(411)	3008	2723	715780
912	16.8	6.0	3.1	chr11	93572134	93572331	(41514291)	+	L1MC1	LINE/L1	5481	5685	(477)	715782
271	17.6	7.3	0.3	chr11	94090980	94091064	(40995558)	+	MamGypLTR1d	LTR/Gypsy	696	796	(17)	716672
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18	7.6	0.0	0.0	chr11	94543836	94543863	(40542759)	+	(CTCC)n	Simple_repeat	1	28	(0)	717311
2272	15.9	6.4	1.5	chr11	96434955	96435357	(38651265)	C	MSTB	LTR/ERVL-MaLR	(2)	424	1	720113
5341	15.1	3.9	1.5	chr11	96435358	96436442	(38650180)	C	L1MA8	LINE/L1	(493)	5798	4700	720112
881	34.5	1.2	1.0	chr11	96494427	96494836	(38591786)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	1	720190
974	34.5	3.2	5.3	chr11	96494838	96495385	(38591237)	C	MLT1I-int	LTR/ERVL-MaLR	(1)	1386	851	720190
226	28.6	3.1	0.0	chr11	102864419	102864481	(32222141)	C	MIRc	SINE/MIR	(202)	66	2	728573
235	37.9	8.7	5.2	chr11	109173531	109173839	(25912783)	C	L2b	LINE/L2	(1)	3374	3054	737985
400	29.0	11.7	1.6	chr11	110357260	110357477	(24729145)	C	MIRc	SINE/MIR	(19)	249	5	739708
21	20.9	0.0	0.0	chr11	110357703	110357742	(24728880)	+	(T)n	Simple_repeat	1	40	(0)	739709
237	29.0	13.4	4.4	chr11	112523247	112523517	(22563105)	+	L3	LINE/CR1	3668	3966	(133)	743259
13	16.7	4.8	2.3	chr11	113687686	113687727	(21398895)	+	GA-rich	Low_complexity	1	44	(0)	744991
12	12.1	0.0	11.1	chr11	113687945	113687989	(21398633)	+	(CCTCTC)n	Simple_repeat	1	45	(0)	744992
1368	21.8	2.3	0.7	chr11	115530042	115530346	(19556276)	C	L1MB4	LINE/L1	(1)	6179	5870	747767
484	33.3	4.0	6.0	chr11	116061129	116061380	(19025242)	+	MIRc	SINE/MIR	19	265	(3)	748633
370	33.1	4.4	0.0	chr11	117743063	117743192	(17343430)	C	L2b	LINE/L2	(22)	3353	3218	751687
211	29.4	3.2	2.1	chr11	117866431	117866524	(17220098)	C	Tigger19a	DNA/TcMar-Tigger	(63)	260	166	751878
3040	12.4	1.6	0.4	chr11	118498569	118499047	(16587575)	C	L1MC1	LINE/L1	(17)	6316	5832	753017
28	0.0	0.0	0.0	chr11	119018676	119018701	(16067921)	+	(GGA)n	Simple_repeat	1	26	(0)	754099
489	26.4	8.9	7.8	chr11	119606569	119607106	(15479516)	C	LTR48B	LTR/ERV1	(11)	633	10	755169
213	25.9	17.6	3.6	chr11	120324915	120325026	(14761596)	+	L2b	LINE/L2	3268	3420	(6)	756367
20	25.3	0.0	0.0	chr11	120325238	120325300	(14761322)	+	(CCTCCG)n	Simple_repeat	1	63	(0)	756368
2108	23.1	4.2	0.4	chr11	124175360	124175923	(10910699)	+	L1MB7	LINE/L1	5614	6175	(9)	762661
2958	20.3	6.6	2.7	chr11	129143290	129143992	(5942630)	+	MER44C	DNA/TcMar-Tigger	2	733	(0)	769889
1268	20.2	15.9	1.3	chr11	129580116	129580426	(5506196)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	770514
214	34.5	10.5	3.2	chr11	129695506	129695628	(5390994)	C	MamTip2	DNA/hAT-Tip100	(164)	141	9	770677
2294	11.1	0.0	1.3	chr11	130085168	130085483	(5001139)	+	AluSx1	SINE/Alu	1	312	(0)	771346
3762	12.6	6.7	4.0	chr11	130085484	130085615	(5001007)	+	L1M3	LINE/L1	3505	3632	(2508)	771345
4211	16.8	9.9	1.2	chr11	130085601	130087077	(4999545)	C	L1MB4	LINE/L1	(30)	6150	4526	771347
804	28.1	15.5	1.4	chr11	133259824	133260558	(1826064)	C	L2a	LINE/L2	(0)	3426	2565	775697
275	14.1	3.0	0.0	chr11	134840171	134840234	(246388)	C	L1MA9	LINE/L1	(288)	6024	5959	777720
300	12.5	3.0	0.0	chr11	134840231	134840294	(246328)	C	L1MA9	LINE/L1	(288)	6024	5959	777720
1267	14.9	3.9	0.0	chr11	134840291	134840511	(246111)	C	L1MA9	LINE/L1	(288)	6024	5795	777721
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
364	25.0	10.8	2.8	chr12	22078	22221	(133253088)	+	MIR	SINE/MIR	46	202	(60)	778095
193	21.1	1.9	7.1	chr12	153433	153488	(133121821)	C	L3	LINE/CR1	(33)	4066	4014	778313
336	29.0	8.8	1.4	chr12	806084	806230	(132469079)	C	MIRc	SINE/MIR	(1)	267	109	779513
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
356	32.0	4.9	8.3	chr12	2768157	2768397	(130506912)	+	L2c	LINE/L2	3071	3307	(80)	782615
200	13.2	2.6	2.6	chr12	2768385	2768423	(130506886)	+	L2c	LINE/L2	3269	3307	(80)	782616
189	15.8	2.6	2.6	chr12	2768432	2768470	(130506839)	+	L2c	LINE/L2	3269	3307	(80)	782616
270	25.4	2.6	10.2	chr12	2768479	2768605	(130506704)	+	L2c	LINE/L2	3269	3385	(2)	782617
11	18.1	2.4	4.8	chr12	3181969	3182009	(130093300)	+	(TGTGCTG)n	Simple_repeat	1	42	(0)	783467
12	26.4	1.7	4.9	chr12	3182423	3182482	(130092827)	+	(CTCTTT)n	Simple_repeat	1	61	(0)	783468
567	18.7	9.2	3.5	chr12	3343011	3343047	(129932262)	C	MER5A	DNA/hAT-Charlie	(143)	46	11	783689
236	10.5	0.0	5.0	chr12	3343053	3343092	(129932217)	+	L3	LINE/CR1	4054	4091	(8)	783691
13	24.6	5.1	1.6	chr12	3366601	3366659	(129908650)	+	(CCCCT)n	Simple_repeat	1	62	(0)	783739
500	27.9	33.4	3.8	chr12	4030307	4030742	(129244567)	C	L2c	LINE/L2	(47)	3340	2766	784811
15	10.8	3.3	0.0	chr12	4031250	4031279	(129244030)	+	(CCGC)n	Simple_repeat	1	31	(0)	784812
21	22.5	1.7	1.6	chr12	6612945	6613004	(126662305)	+	(CCCT)n	Simple_repeat	1	61	(0)	789028
11	17.4	0.0	5.6	chr12	6613660	6613695	(126661614)	+	(CCCACT)n	Simple_repeat	1	36	(0)	789029
1636	19.5	4.4	2.5	chr12	7838397	7838749	(125436560)	+	MLT1B-int	LTR/ERVL-MaLR	1371	1730	(5)	791168
2100	15.7	3.4	1.6	chr12	7838756	7839136	(125436173)	+	MLT1B	LTR/ERVL-MaLR	1	388	(2)	791168
508	20.7	2.1	6.7	chr12	8247053	8247202	(125028107)	+	MLT1C	LTR/ERVL-MaLR	41	183	(284)	791983
716	11.9	0.0	2.0	chr12	8247206	8247306	(125028003)	+	AluJr	SINE/Alu	1	99	(213)	791984
3769	18.6	7.1	1.8	chr12	9678841	9679617	(123595692)	C	L1MC1	LINE/L1	(4267)	2241	1435	794166
309	22.4	5.5	0.0	chr12	9679622	9679706	(123595603)	+	L1MC2	LINE/L1	6246	6335	(9)	794172
3853	8.1	8.6	1.2	chr12	10136725	10137284	(123138025)	+	LTR14B	LTR/ERVK	4	608	(0)	794782
1127	13.5	4.7	0.0	chr12	10137285	10137447	(123137862)	+	AluJb	SINE/Alu	129	299	(13)	794783
3994	14.0	2.3	0.5	chr12	10360930	10361561	(122913748)	C	LTR9B	LTR/ERV1	(0)	644	1	795146
14	22.7	2.0	3.9	chr12	11500684	11500733	(121774576)	+	(GCC)n	Simple_repeat	1	51	(0)	796566
626	30.3	6.8	0.1	chr12	13043888	13044132	(120231177)	C	MIRb	SINE/MIR	(2)	266	1	799299
300	22.6	5.1	4.1	chr12	13044135	13044231	(120231078)	C	MIRb	SINE/MIR	(69)	199	102	799300
3452	23.4	1.6	0.4	chr12	14220389	14221108	(119054201)	+	HERV17-int	LTR/ERV1	7898	8626	(0)	800977
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
2225	7.8	0.0	9.9	chr12	19578992	19579323	(113695986)	+	AluSq2	SINE/Alu	1	299	(14)	808453
317	26.5	1.6	13.0	chr12	19579324	19579484	(113695825)	C	HAL1ME	LINE/L1	(52)	2413	2273	808452
28	0.0	0.0	0.0	chr12	22195435	22195461	(111079848)	+	(TTGTT)n	Simple_repeat	1	27	(0)	811755
816	16.1	1.4	0.0	chr12	22195468	22195604	(111079705)	C	U1	snRNA	(0)	165	27	811756
1946	16.5	5.8	7.9	chr12	23161695	23162136	(110113173)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	813243
7794	18.9	4.9	5.1	chr12	23162137	23163101	(110112208)	C	L1MB7	LINE/L1	(1753)	4393	3482	813240
431	30.8	5.4	0.0	chr12	24546646	24546804	(108728505)	+	Zaphod3	DNA/hAT-Tip100	9	176	(2447)	815057
267	23.2	10.4	11.5	chr12	24546926	24547178	(108728131)	+	HAL1	LINE/L1	2036	2286	(221)	815058
203	29.3	0.0	0.0	chr12	24959775	24959832	(108315477)	+	L2	LINE/L2	859	916	(2503)	815717
196	30.8	0.0	1.5	chr12	24959834	24959899	(108315410)	+	MER5A	DNA/hAT-Charlie	57	121	(68)	815718
16060	13.1	0.9	2.4	chr12	24960054	24960982	(108314327)	+	L1M1	LINE/L1	13	921	(6644)	815719
445	31.3	10.0	4.7	chr12	25279701	25280059	(107995250)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	216	816255
710	29.4	13.6	1.2	chr12	25738336	25738571	(107536738)	C	L2a	LINE/L2	(236)	3190	2914	816904
502	25.5	5.3	1.2	chr12	26053507	26053669	(107221640)	C	MER103C	DNA/hAT-Charlie	(90)	207	38	817430
1883	9.4	1.8	2.5	chr12	26294513	26294794	(106980515)	C	L1MA2	LINE/L1	(9)	6295	6016	817770
500	35.6	3.3	2.2	chr12	26294831	26295008	(106980301)	+	ERV3-16A3_I-int	LTR/ERVL	4289	4468	(758)	817768
642	25.9	0.0	5.4	chr12	26295062	26295228	(106980081)	C	MER105	DNA/hAT-Charlie	(39)	164	7	817771
314	17.6	0.0	0.0	chr12	26382834	26382884	(106892425)	+	MSTB	LTR/ERVL-MaLR	1	51	(375)	817895
198	14.7	0.0	0.0	chr12	26382903	26382936	(106892373)	C	MIRc	SINE/MIR	(113)	155	122	817896
2615	15.8	3.5	0.7	chr12	26382937	26383350	(106891959)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	817897
17	33.0	0.0	1.8	chr12	26937983	26938039	(106337270)	+	(GC)n	Simple_repeat	1	57	(0)	818728
2639	15.2	4.5	1.2	chr12	30597587	30597998	(102677311)	C	MSTA	LTR/ERVL-MaLR	(0)	428	3	823921
748	11.2	0.0	0.0	chr12	31728025	31728122	(101547187)	C	AluJo	SINE/Alu	(176)	136	39	825909
894	23.4	3.1	2.4	chr12	31728301	31728554	(101546755)	C	MIR	SINE/MIR	(0)	262	7	825910
2212	13.8	5.2	0.3	chr12	32932644	32933005	(100342304)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	828380
15	19.7	0.0	0.0	chr12	32933019	32933047	(100342262)	+	G-rich	Low_complexity	1	29	(0)	828381
761	30.1	9.2	10.5	chr12	33817793	33818642	(99456667)	C	L1PA13	LINE/L1	(5376)	1409	449	829498
419	7.5	0.0	0.0	chr12	33818644	33818695	(99456614)	C	THE1B	LTR/ERVL-MaLR	(0)	364	313	829499
2501	8.3	11.5	3.7	chr12	33818696	33819142	(99456167)	C	LTR14B	LTR/ERVK	(0)	608	1	829500
3338	10.9	3.7	8.1	chr12	34048042	34048661	(99226648)	+	LTR14B	LTR/ERVK	17	608	(0)	829767
15200	10.8	3.0	2.9	chr12	34048662	34053131	(99222178)	+	L1PB1	LINE/L1	777	6375	(492)	829766
3301	11.4	3.7	8.2	chr12	38343949	38344569	(94930740)	+	LTR14B	LTR/ERVK	17	608	(0)	830994
8111	12.1	1.8	0.8	chr12	38344570	38346545	(94928764)	+	L1PB1	LINE/L1	777	2782	(4081)	830993
2205	19.8	6.1	1.2	chr12	40954558	40955068	(92320241)	C	MER77B	LTR/ERVL	(5)	695	158	834423
4517	7.4	3.8	0.3	chr12	45175840	45176426	(88098883)	+	LTR14B	LTR/ERVK	1	608	(0)	840436
20	24.9	0.0	0.0	chr12	45176436	45176487	(88098822)	+	A-rich	Low_complexity	1	52	(0)	840437
13	18.9	0.0	0.0	chr12	45216357	45216386	(88058923)	+	GA-rich	Low_complexity	1	30	(0)	840513
6482	17.8	3.7	1.7	chr12	46084706	46087362	(87187947)	C	MER83B-int	LTR/ERV1	(17)	4863	12	841816
13	20.9	0.0	0.0	chr12	47737115	47737147	(85538162)	+	(GCCCCT)n	Simple_repeat	1	33	(0)	844116
15	5.5	0.0	0.0	chr12	47737170	47737188	(85538121)	+	(CT)n	Simple_repeat	1	19	(0)	844117
12	21.4	2.9	8.3	chr12	47791804	47791873	(85483436)	+	(CCCCT)n	Simple_repeat	1	72	(0)	844200
548	31.2	6.6	1.0	chr12	47884265	47884465	(85390844)	C	MIRb	SINE/MIR	(22)	246	34	844369
309	34.1	2.9	0.7	chr12	47884510	47884645	(85390664)	C	MIR	SINE/MIR	(27)	235	97	844370
19	14.5	0.0	0.0	chr12	51239466	51239496	(82035813)	+	(A)n	Simple_repeat	1	31	(0)	850917
2461	6.7	0.0	0.3	chr12	51239497	51239794	(82035515)	+	AluSx1	SINE/Alu	1	297	(15)	850918
234	32.6	1.5	8.8	chr12	51336310	51336361	(81938948)	+	L2c	LINE/L2	2348	2401	(1018)	851155
1841	11.3	6.0	0.3	chr12	51336362	51336643	(81938666)	+	AluSx	SINE/Alu	1	299	(13)	851156
1130	18.2	7.3	0.0	chr12	51992991	51993232	(81282077)	C	L1MA9	LINE/L1	(0)	6312	6052	852277
2434	8.0	0.0	1.6	chr12	51993484	51993796	(81281513)	+	AluSc	SINE/Alu	2	309	(0)	852278
231	33.8	8.3	0.9	chr12	52261600	52261832	(81013477)	C	L2c	LINE/L2	(225)	3162	2911	852714
893	21.6	7.0	0.7	chr12	52713251	52713520	(80561789)	C	ORSL-2b	DNA/hAT-Tip100	(43)	465	178	853317
344	26.1	2.1	0.0	chr12	53169622	53169713	(80105596)	C	L1ME3G	LINE/L1	(588)	336	243	854202
2229	10.2	0.0	2.0	chr12	53426680	53426982	(79848327)	C	AluSz	SINE/Alu	(15)	297	1	854733
17	0.0	0.0	0.0	chr12	53426983	53427001	(79848308)	+	(A)n	Simple_repeat	1	19	(0)	854734
399	24.6	15.2	4.6	chr12	53427041	53427257	(79848052)	C	L2a	LINE/L2	(0)	3426	3183	854735
2073	10.8	1.4	0.4	chr12	53427394	53427702	(79847607)	C	AluSz	SINE/Alu	(0)	312	1	854736
14	16.9	3.0	0.0	chr12	55927235	55927267	(77348042)	+	GA-rich	Low_complexity	1	34	(0)	858553
20	17.4	0.0	2.1	chr12	57430479	57430525	(75844784)	+	(CCGCCCC)n	Simple_repeat	1	47	(0)	861299
17	28.0	1.5	1.5	chr12	57430640	57430705	(75844604)	+	(CGCC)n	Simple_repeat	1	67	(0)	861300
13	18.8	2.2	4.3	chr12	62848899	62848944	(70426365)	+	G-rich	Low_complexity	1	47	(0)	868575
5198	14.2	0.4	1.4	chr12	63398371	63399086	(69876223)	+	HERVL18-int	LTR/ERVL	2720	3437	(2610)	869361
4019	9.7	1.5	6.9	chr12	63399087	63399727	(69875582)	C	LTR14B	LTR/ERVK	(0)	608	3	869362
296	25.0	6.1	2.1	chr12	64666752	64666845	(68608464)	+	L2a	LINE/L2	3322	3419	(7)	871589
14	31.3	0.0	0.0	chr12	65169808	65169858	(68105451)	+	(CGG)n	Simple_repeat	1	51	(0)	872393
12	24.0	4.8	3.1	chr12	65170235	65170296	(68105013)	+	G-rich	Low_complexity	1	65	(0)	872394
389	33.3	9.6	3.1	chr12	65309671	65310002	(67965307)	C	L2c	LINE/L2	(223)	3164	2795	872625
499	25.3	7.1	3.1	chr12	65310023	65310185	(67965124)	+	MamRep1879	DNA/hAT-Tip100?	1	170	(46)	872626
194	37.1	2.4	0.8	chr12	65310293	65310417	(67964892)	C	L2c	LINE/L2	(712)	2707	2581	872625
19	17.9	0.0	0.0	chr12	65629952	65629990	(67645319)	+	(ACAC)n	Simple_repeat	1	39	(0)	873075
576	25.3	7.7	10.5	chr12	65630010	65630332	(67644977)	C	L2a	LINE/L2	(338)	3081	2769	873073
2291	15.5	2.8	6.0	chr12	66266006	66266492	(67008817)	C	L1MA4	LINE/L1	(0)	6300	5830	874092
1443	23.1	5.6	4.0	chr12	66266493	66266668	(67008641)	+	MER54B	LTR/ERVL	221	414	(487)	874091
23	3.5	0.0	3.2	chr12	66266686	66266716	(67008593)	+	(GT)n	Simple_repeat	1	31	(0)	874093
2181	11.5	0.3	0.3	chr12	68573801	68574095	(64701214)	C	AluSx	SINE/Alu	(17)	295	1	877628
24	19.3	0.0	0.0	chr12	68808591	68808643	(64466666)	+	(GGCTCGG)n	Simple_repeat	1	53	(0)	878136
1022	20.2	13.0	0.3	chr12	69012639	69012921	(64262388)	C	LTR54B	LTR/ERV1	(2)	496	173	878510
402	7.7	0.0	0.0	chr12	69012920	69012971	(64262338)	C	LTR54B	LTR/ERV1	(446)	52	1	878510
2709	15.2	2.8	0.2	chr12	69012975	69013389	(64261920)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	878511
299	32.4	0.0	3.7	chr12	69065827	69065935	(64209374)	C	L1ME4c	LINE/L1	(60)	770	666	878611
5802	17.2	4.1	1.0	chr12	69298110	69299230	(63976079)	+	MSTB-int	LTR/ERVL-MaLR	494	1651	(0)	879030
2282	16.1	2.6	4.2	chr12	69299231	69299620	(63975689)	+	MSTB	LTR/ERVL-MaLR	1	399	(27)	879030
1925	15.3	3.5	10.2	chr12	71727990	71728448	(61546861)	C	MSTA	LTR/ERVL-MaLR	(1)	427	1	882755
656	31.4	4.9	4.1	chr12	71728449	71729200	(61546109)	+	L1M4	LINE/L1	4008	4774	(1440)	882744
2286	25.6	1.4	3.1	chr12	74230415	74230937	(59044372)	+	MLT2B3	LTR/ERVL	1	514	(40)	885960
3288	11.8	6.6	5.3	chr12	76240345	76240928	(57034381)	+	LTR14B	LTR/ERVK	17	608	(0)	888922
2970	15.8	4.2	2.1	chr12	78292762	78293279	(54982030)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	891942
1763	19.5	1.1	4.0	chr12	82643670	82644048	(50631261)	C	MSTB	LTR/ERVL-MaLR	(0)	426	59	898030
912	30.5	4.4	0.7	chr12	82644041	82644347	(50630962)	+	MLT1F	LTR/ERVL-MaLR	135	453	(95)	898031
8868	22.7	4.8	2.2	chr12	84228707	84231752	(49043557)	C	L1M1	LINE/L1	(4739)	2826	10	900019
11591	10.4	1.5	0.0	chr12	86036211	86037927	(47237382)	C	L1PA7	LINE/L1	(1890)	4571	2829	902439
2478	8.6	10.1	0.4	chr12	86037929	86038371	(47236938)	C	LTR14B	LTR/ERVK	(1)	607	1	902440
834	31.6	14.7	1.1	chr12	87249933	87250396	(46024913)	C	L2a	LINE/L2	(702)	2717	2180	903967
1199	34.8	6.8	5.3	chr12	87250553	87251499	(46023810)	+	LTR78	LTR/ERV1	281	1242	(62)	903968
7452	12.6	2.6	2.9	chr12	89767974	89769143	(43506166)	C	ERVL-B4-int	LTR/ERVL	(0)	5714	4549	907558
22167	15.1	2.2	2.1	chr12	89769142	89771604	(43503705)	C	ERVL-B4-int	LTR/ERVL	(2052)	3662	1244	907558
1570	18.2	7.9	0.0	chr12	91026950	91027262	(42248047)	C	MLT1A1	LTR/ERVL-MaLR	(2)	406	67	909372
1687	17.7	7.5	2.0	chr12	91027264	91027429	(42247880)	C	Tigger4b	DNA/TcMar-Tigger	(0)	361	188	909373
2150	17.3	5.1	0.5	chr12	91027430	91027841	(42247468)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	909374
582	24.8	1.8	8.9	chr12	92113001	92113166	(41162143)	C	MIR	SINE/MIR	(64)	198	46	910958
605	23.2	8.2	5.8	chr12	92113618	92114034	(41161275)	C	L1MEg	LINE/L1	(3806)	2513	2077	910960
4909	7.7	0.8	1.3	chr12	93451242	93451877	(39823432)	C	LTR10E	LTR/ERV1	(0)	633	1	913459
326	27.1	11.3	0.6	chr12	93451886	93452048	(39823261)	+	L2c	LINE/L2	3185	3339	(36)	913460
1720	13.4	0.0	19.1	chr12	93452115	93452486	(39822823)	C	AluJo	SINE/Alu	(11)	301	1	913461
2260	11.5	6.3	0.6	chr12	94082766	94083124	(39192185)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	914627
517	26.8	7.2	10.2	chr12	94083125	94083219	(39192090)	+	MER102a	DNA/hAT-Charlie	176	264	(66)	914626
2047	16.1	8.4	2.0	chr12	94083245	94083644	(39191665)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	914628
204	28.4	5.0	8.7	chr12	95943038	95943141	(37332168)	+	MIRb	SINE/MIR	71	170	(98)	918160
1883	16.2	12.2	0.0	chr12	96036748	96037123	(37238186)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	918302
411	31.9	18.2	5.8	chr12	96037124	96037692	(37237617)	C	L2c	LINE/L2	(932)	2487	1824	918301
2170	14.4	8.6	9.9	chr12	100132277	100132664	(33142645)	+	MSTB2	LTR/ERVL-MaLR	2	408	(49)	924943
516	32.4	8.1	2.5	chr12	103575203	103575481	(29699828)	C	MamGypLTR3	LTR/Gypsy	(0)	894	599	930887
294	31.4	1.7	0.8	chr12	103575587	103575705	(29699604)	C	MamGypLTR3	LTR/Gypsy	(456)	438	319	930887
680	21.2	9.6	2.2	chr12	103650703	103650885	(29624424)	C	L1ME3A	LINE/L1	(1)	6172	5975	931018
984	25.8	14.2	3.5	chr12	104903082	104903440	(28371869)	+	L2a	LINE/L2	2597	3008	(411)	933477
15	21.6	3.5	3.4	chr12	105330920	105330976	(27944333)	+	(GCGCGG)n	Simple_repeat	1	59	(0)	934182
343	21.1	27.9	0.0	chr12	107209387	107209534	(26065775)	C	MER5C1	DNA/hAT-Charlie	(0)	263	72	937641
258	23.3	0.0	0.0	chr12	107209655	107209697	(26065612)	C	MER63B	DNA/hAT-Blackjack	(0)	436	394	937642
5142	6.3	17.4	2.6	chr12	107209703	107210402	(26064907)	+	LTR12	LTR/ERV1	1	826	(0)	937643
1097	25.9	6.4	4.1	chr12	107239528	107239986	(26035323)	C	MLT1J	LTR/ERVL-MaLR	(42)	470	1	937702
734	31.4	7.7	9.2	chr12	107240163	107240533	(26034776)	+	MLT1N2	LTR/ERVL-MaLR	1	365	(197)	937703
339	34.4	7.6	1.5	chr12	107932129	107932326	(25342983)	+	MIRb	SINE/MIR	7	217	(51)	939096
555	30.6	1.5	2.5	chr12	107932371	107932568	(25342741)	+	MIRb	SINE/MIR	34	229	(39)	939097
2808	9.8	0.8	0.8	chr12	107990050	107990450	(25284859)	C	MER57B1	LTR/ERV1	(0)	401	1	939219
48	25.1	3.9	2.7	chr12	108597458	108597635	(24677674)	+	(CA)n	Simple_repeat	1	185	(0)	940623
20	15.8	5.9	1.9	chr12	108597822	108597872	(24677437)	+	(CA)n	Simple_repeat	1	54	(0)	940624
293	30.5	8.4	5.1	chr12	109704440	109704577	(23570732)	C	Charlie15a	DNA/hAT-Charlie	(30)	194	52	943125
425	32.9	5.9	0.7	chr12	109704599	109704742	(23570567)	+	MIR3	SINE/MIR	18	169	(39)	943126
17	14.9	2.7	0.0	chr12	112381470	112381506	(20893803)	+	(AACAA)n	Simple_repeat	1	38	(0)	949062
12	9.7	0.0	0.0	chr12	112381753	112381774	(20893535)	+	(GGAG)n	Simple_repeat	1	22	(0)	949063
14	25.4	3.0	4.4	chr12	112418853	112418936	(20856373)	+	(GGC)n	Simple_repeat	1	82	(0)	949170
310	27.6	9.7	3.5	chr12	113724489	113724661	(19550648)	C	L2a	LINE/L2	(13)	3413	3229	952333
445	29.1	0.7	0.0	chr12	113724713	113724846	(19550463)	C	MIR3	SINE/MIR	(41)	167	33	952334
384	34.4	7.5	4.6	chr12	114815096	114815354	(18459955)	+	MamTip2	DNA/hAT-Tip100	31	297	(8)	954618
2994	21.2	5.4	2.7	chr12	114860148	114860763	(18414546)	C	L1ME1	LINE/L1	(1)	6178	5544	954743
21	7.5	0.0	0.0	chr12	116429812	116429839	(16845470)	+	(A)n	Simple_repeat	1	28	(0)	958027
1752	16.5	5.6	1.4	chr12	116532278	116532568	(16742741)	+	AluJr	SINE/Alu	6	309	(3)	958304
295	20.6	0.0	3.2	chr12	116532569	116532581	(16742728)	+	AluJo	SINE/Alu	144	204	(108)	958305
228	27.7	5.9	3.5	chr12	116532619	116532734	(16742575)	C	L2a	LINE/L2	(618)	2801	2683	958297
753	29.7	0.9	5.9	chr12	117683793	117684028	(15591281)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	960849
383	31.7	7.5	9.1	chr12	117684098	117684382	(15590927)	+	L2b	LINE/L2	3076	3355	(20)	960850
1923	15.1	0.0	0.7	chr12	119661156	119661447	(13613862)	C	AluSz6	SINE/Alu	(17)	295	6	965279
2226	20.1	3.9	7.2	chr12	119661448	119661560	(13613749)	C	L1MB5	LINE/L1	(477)	5766	5661	965278
628	31.5	11.1	3.6	chr12	119661691	119661883	(13613426)	C	LTR16C	LTR/ERVL	(37)	452	266	965280
2223	9.1	1.3	0.3	chr12	120291111	120291406	(12983903)	+	AluSq	SINE/Alu	8	306	(7)	966630
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
1272	15.9	11.5	0.8	chr12	120470470	120470733	(12804576)	C	AluJb	SINE/Alu	(15)	297	2	967153
425	26.0	16.1	0.1	chr12	120971402	120971572	(12303737)	+	MIRb	SINE/MIR	1	206	(62)	968256
1518	24.6	4.3	2.3	chr12	120971871	120972303	(12303006)	+	MER119	DNA/hAT-Charlie	56	497	(86)	968257
1879	15.3	3.0	0.3	chr12	121455431	121455724	(11819585)	+	AluJr	SINE/Alu	2	303	(9)	969412
259	25.4	0.0	0.0	chr12	121455870	121455924	(11819385)	C	MER46C	DNA/TcMar-Tigger	(283)	55	1	969413
1894	13.8	0.3	6.7	chr12	121503285	121503611	(11771698)	C	AluJo	SINE/Alu	(6)	306	1	969549
30	0.0	0.0	0.0	chr12	121590899	121590926	(11684383)	+	(T)n	Simple_repeat	1	28	(0)	969746
569	22.1	14.1	0.0	chr12	121663912	121664069	(11611240)	+	MLT1K	LTR/ERVL-MaLR	71	254	(341)	969981
375	23.0	28.2	2.8	chr12	121664113	121664293	(11611016)	+	MLT1K	LTR/ERVL-MaLR	368	594	(1)	969981
223	21.1	30.0	0.0	chr12	121664348	121664465	(11610844)	C	L2b	LINE/L2	(199)	3188	3024	969982
1586	8.8	2.9	0.0	chr12	121664478	121664682	(11610627)	+	AluSx1	SINE/Alu	2	212	(100)	969983
2193	10.9	1.3	0.3	chr12	123517413	123517715	(9757594)	C	AluSz6	SINE/Alu	(0)	312	7	974289
392	23.3	7.2	0.0	chr12	123517742	123517831	(9757478)	+	MER33	DNA/hAT-Charlie	7	103	(221)	974290
1942	16.7	1.9	7.3	chr12	123517832	123518221	(9757088)	+	L1MB3	LINE/L1	5749	6133	(50)	974291
1875	14.6	2.0	1.0	chr12	123518222	123518515	(9756794)	+	AluJr	SINE/Alu	1	297	(15)	974292
212	35.8	10.2	0.0	chr12	123534618	123534810	(9740499)	+	L2c	LINE/L2	3120	3334	(53)	974336
1269	27.7	9.9	2.5	chr12	123571335	123571727	(9703582)	+	MLT1J2	LTR/ERVL-MaLR	10	434	(14)	974436
436	27.0	12.8	5.4	chr12	123571729	123571896	(9703413)	C	MLT1J1	LTR/ERVL-MaLR	(1)	410	211	974437
257	33.3	8.0	2.0	chr12	123891412	123891564	(9383745)	C	L2a	LINE/L2	(1017)	2402	2240	975139
2235	22.4	7.5	1.9	chr12	123891717	123892127	(9383182)	C	MER68	LTR/ERVL	(2)	561	143	975143
2754	11.8	4.7	0.0	chr12	123892128	123892532	(9382777)	C	MSTA	LTR/ERVL-MaLR	(2)	426	2	975144
3120	22.7	1.2	0.8	chr12	123919436	123920074	(9355235)	C	L1MB7	LINE/L1	(1)	6183	5542	975183
367	30.8	2.9	4.3	chr12	124766900	124767106	(8508203)	C	MamRep4096	DNA/hAT-Tip100	(220)	206	3	976784
192	27.2	6.6	0.9	chr12	124767272	124767377	(8507932)	C	L2b	LINE/L2	(0)	3387	3241	976785
183	25.9	3.6	0.0	chr12	124767412	124767465	(8507844)	+	MIR1_Amn	SINE/MIR	94	149	(81)	976786
2528	6.5	0.0	0.3	chr12	124937196	124937505	(8337804)	+	AluY	SINE/Alu	1	309	(2)	977196
3949	25.7	0.7	2.6	chr12	124937514	124938486	(8336823)	+	HERVIP10FH-int	LTR/ERV1	4146	5100	(2)	977197
4301	10.5	1.3	4.9	chr12	125725160	125725788	(7549521)	+	LTR14B	LTR/ERVK	3	608	(0)	978636
556	25.3	15.3	4.0	chr12	128930192	128930463	(4344846)	+	MER113	DNA/hAT-Charlie	107	414	(107)	984167
302	27.3	7.5	0.0	chr12	128930439	128930537	(4344772)	+	MER113	DNA/hAT-Charlie	410	516	(5)	984168
664	28.9	9.4	0.4	chr12	130064694	130064926	(3210383)	C	MIR	SINE/MIR	(3)	259	4	986114
3354	16.5	4.0	3.1	chr12	130515198	130515702	(2759607)	C	L1MB3	LINE/L1	(7)	6176	5665	986772
347	31.6	10.6	6.6	chr12	130832718	130833140	(2442169)	+	L2b	LINE/L2	2913	3354	(21)	987282
12	10.0	0.0	0.0	chr12	130833155	130833176	(2442133)	+	(AATG)n	Simple_repeat	1	22	(0)	987283
2359	10.5	1.7	0.6	chr12	130847017	130847369	(2427940)	C	L1PA13	LINE/L1	(0)	6163	5807	987314
1861	16.1	0.3	0.3	chr12	130847596	130847893	(2427416)	C	AluJb	SINE/Alu	(8)	304	7	987315
1912	18.3	0.8	1.9	chr12	130923331	130923698	(2351611)	+	MLT1A0	LTR/ERVL-MaLR	1	364	(1)	987480
791	25.5	4.8	8.8	chr12	131210305	131210738	(2064571)	+	MLT1J1	LTR/ERVL-MaLR	9	424	(20)	987858
298	29.1	11.7	0.0	chr12	131858400	131858588	(1416721)	C	L2a	LINE/L2	(528)	2891	2678	988703
393	14.1	0.0	0.0	chr12	132189953	132190016	(1085293)	+	L1PA6	LINE/L1	6091	6154	(0)	989189
268	28.1	3.3	0.0	chr12	132190020	132190108	(1085201)	C	L1MD3	LINE/L1	(5)	7990	7899	989190
361	26.4	5.5	0.0	chr12	132190290	132190410	(1084899)	C	L1M5	LINE/L1	(697)	5747	5620	989191
816	25.2	4.6	4.4	chr12	132445743	132446081	(829228)	+	LTR8	LTR/ERV1	1	425	(395)	989466
1565	19.4	5.8	1.9	chr12	132446333	132446699	(828610)	+	LTR8	LTR/ERV1	310	691	(0)	989467
510	19.7	4.1	0.0	chr12	132868701	132868817	(406492)	+	L1MB7	LINE/L1	5909	6030	(154)	990066
233	20.0	0.0	3.2	chr12	132868795	132868856	(406453)	+	L1MB8	LINE/L1	5971	6030	(148)	990069
233	20.0	0.0	3.2	chr12	132868834	132868895	(406414)	+	L1MB8	LINE/L1	5971	6030	(148)	990069
233	20.0	0.0	3.2	chr12	132868873	132868934	(406375)	+	L1MB8	LINE/L1	5971	6030	(148)	990069
241	17.0	0.0	3.6	chr12	132868951	132869005	(406304)	+	L1MB8	LINE/L1	5971	6023	(155)	990069
248	18.3	0.0	3.2	chr12	132868990	132869051	(406258)	+	L1MB8	LINE/L1	5971	6030	(148)	990069
233	20.0	0.0	3.2	chr12	132869029	132869090	(406219)	+	L1MB8	LINE/L1	5971	6030	(148)	990069
233	20.0	0.0	3.2	chr12	132869068	132869129	(406180)	+	L1MB8	LINE/L1	5971	6030	(148)	990069
233	20.0	0.0	3.2	chr12	132869107	132869168	(406141)	+	L1MB8	LINE/L1	5971	6030	(148)	990069
233	20.0	0.0	3.2	chr12	132869146	132869207	(406102)	+	L1MB8	LINE/L1	5971	6030	(148)	990069
570	24.4	1.9	11.4	chr12	132869185	132869411	(405898)	+	L1MB8	LINE/L1	5971	6175	(3)	990070
497	31.7	10.4	2.5	chr12	133002135	133002496	(272813)	+	L2c	LINE/L2	2469	2862	(557)	990331
363	26.0	0.0	0.0	chr12	133123261	133123333	(151976)	+	L2a	LINE/L2	3333	3405	(21)	990551
1573	18.6	6.3	1.1	chr12	133123443	133123727	(151582)	+	AluJr	SINE/Alu	1	301	(11)	990552
767	26.8	8.3	6.0	chr12	133219669	133220116	(55193)	+	L1ME1	LINE/L1	5544	6002	(177)	990712
3680	13.6	0.5	5.2	chr13	19409947	19410567	(94953761)	+	LTR14B	LTR/ERVK	17	608	(0)	992389
504	16.1	0.9	4.3	chr13	20606909	20607025	(93757303)	+	L1MDa	LINE/L1	3841	3953	(2584)	994562
332	33.1	3.1	1.9	chr13	20678034	20678193	(93686135)	C	L2	LINE/L2	(1370)	2049	1888	994691
3815	7.2	0.4	4.4	chr13	20678247	20678766	(93685562)	C	MER9B	LTR/ERVK	(0)	499	1	994692
3547	16.9	4.0	4.4	chr13	20683985	20684907	(93679421)	C	HERVK9-int	LTR/ERVK	(5198)	898	1	994693
3887	7.0	0.4	1.4	chr13	20684908	20685411	(93678917)	C	MER9B	LTR/ERVK	(0)	499	1	994693
17	0.0	0.0	0.0	chr13	22551498	22551516	(91812812)	+	(AC)n	Simple_repeat	1	19	(0)	997604
1887	9.5	1.7	18.2	chr13	22551550	22551962	(91812366)	C	LTR14A	LTR/ERVK	(0)	344	1	997605
854	7.9	0.0	1.7	chr13	24518749	24518864	(89845464)	C	L1PA6	LINE/L1	(0)	6154	6041	1000417
1674	16.3	2.0	1.7	chr13	24518865	24519163	(89845165)	C	LTR14B	LTR/ERVK	(1)	607	308	1000418
4005	11.8	11.1	19.5	chr13	26343117	26343891	(88020437)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	553	1003120
2920	13.2	3.0	0.6	chr13	26343892	26344372	(88019956)	C	L1PA16	LINE/L1	(0)	6166	5674	1003121
1950	17.0	0.8	8.4	chr13	26482500	26482657	(87881671)	C	MLT1B	LTR/ERVL-MaLR	(239)	151	5	1003325
657	21.9	2.5	0.0	chr13	27479433	27479587	(86884741)	C	LTR33A_	LTR/ERVL	(2)	529	371	1005022
241	28.2	0.0	0.0	chr13	27479738	27479808	(86884520)	C	LTR33A_	LTR/ERVL	(456)	75	5	1005022
15	25.7	2.6	5.1	chr13	27830431	27830506	(86533822)	+	(TTGT)n	Simple_repeat	1	78	(0)	1005580
971	17.7	3.7	1.3	chr13	28635441	28635598	(85728730)	+	AluJo	SINE/Alu	137	298	(14)	1007080
1196	17.7	1.2	9.0	chr13	28635599	28635720	(85728608)	+	L1MC2	LINE/L1	6237	6338	(6)	1007079
239	24.0	10.3	4.6	chr13	28635724	28635832	(85728496)	C	Charlie29a	DNA/hAT-Charlie	(573)	146	31	1007078
326	37.4	6.8	0.6	chr13	28635887	28636053	(85728275)	+	L3	LINE/CR1	3920	4097	(2)	1007077
2406	9.1	0.0	0.0	chr13	29367940	29368237	(84996091)	C	AluYk4	SINE/Alu	(13)	298	1	1008053
1481	13.4	4.4	0.4	chr13	29368373	29368634	(84995694)	+	L1MA4A	LINE/L1	6026	6298	(5)	1008054
11	22.2	0.0	6.4	chr13	29911797	29911843	(84452485)	+	G-rich	Low_complexity	1	47	(0)	1008819
413	30.2	8.9	11.1	chr13	30690778	30691138	(83673190)	+	LTR78B	LTR/ERV1	742	1114	(182)	1010208
1998	12.4	0.0	3.1	chr13	30691139	30691454	(83672874)	C	AluSx1	SINE/Alu	(0)	312	1	1010209
279	20.0	0.0	1.8	chr13	30778828	30778883	(83585445)	+	L2a	LINE/L2	2072	2126	(1293)	1010373
1813	19.6	8.7	3.9	chr13	30778932	30779344	(83584984)	+	MSTB2	LTR/ERVL-MaLR	23	457	(0)	1010374
1584	21.6	3.8	1.4	chr13	31108671	31109026	(83255302)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1010893
237	33.0	8.7	2.5	chr13	31109200	31109317	(83255011)	C	L2b	LINE/L2	(5)	3370	3245	1010894
221	30.6	9.8	1.8	chr13	31109380	31109492	(83254836)	+	L2b	LINE/L2	3039	3161	(214)	1010895
261	28.0	6.0	11.3	chr13	31165362	31165574	(83198754)	+	L2b	LINE/L2	2964	3164	(211)	1010965
394	26.8	3.5	5.2	chr13	31165582	31165754	(83198574)	+	MLT1L	LTR/ERVL-MaLR	84	253	(342)	1010966
2356	10.1	4.7	1.4	chr13	31356085	31356436	(83007892)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1011189
217	28.4	11.9	1.3	chr13	35506721	35506795	(78857533)	C	MIRb	SINE/MIR	(159)	109	26	1017210
299	32.8	9.0	0.0	chr13	35506819	35506949	(78857379)	C	L3	LINE/CR1	(1)	4098	3955	1017211
2232	24.1	8.9	4.7	chr13	35506998	35507740	(78856588)	+	L2	LINE/L2	1906	2682	(737)	1017212
3983	11.4	1.1	2.0	chr13	37090226	37090778	(77273550)	+	LTR14	LTR/ERVK	1	548	(0)	1019537
654	33.3	10.6	1.2	chr13	37090807	37091149	(77273179)	+	Charlie17b	DNA/hAT-Charlie	14	392	(812)	1019538
491	28.2	12.2	3.5	chr13	40403979	40404239	(73960089)	+	LTR81A	LTR/Gypsy	26	312	(1038)	1024064
425	29.9	6.2	1.6	chr13	40404452	40404696	(73959632)	+	LTR81A	LTR/Gypsy	645	901	(492)	1024064
401	32.8	6.6	0.5	chr13	41528556	41528754	(72835574)	+	L1M7	LINE/L1	317	528	(5690)	1025991
609	32.7	11.9	5.4	chr13	41528936	41530142	(72834186)	+	L1ME4b	LINE/L1	3651	4946	(1200)	1025993
2367	21.2	5.1	0.5	chr13	41924876	41925569	(72438759)	+	L1MA9	LINE/L1	2621	3394	(4172)	1026559
4145	13.1	1.7	5.3	chr13	42674925	42675641	(71688687)	C	LTR8	LTR/ERV1	(0)	691	1	1027719
7724	7.4	1.7	1.4	chr13	43040544	43041509	(71322819)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	1028317
1650	27.4	18.1	3.0	chr13	43229304	43230495	(71133833)	C	L2a	LINE/L2	(262)	3164	1757	1028595
11	27.6	0.0	0.0	chr13	43786271	43786309	(70578019)	+	G-rich	Low_complexity	1	39	(0)	1029332
334	23.9	1.7	7.4	chr13	44145156	44145277	(70219051)	C	L2c	LINE/L2	(0)	3387	3273	1029845
1889	18.1	0.0	1.0	chr13	44168819	44169132	(70195196)	+	AluJb	SINE/Alu	1	311	(1)	1029878
13502	14.0	2.9	6.2	chr13	44169133	44170672	(70193656)	C	L1M1	LINE/L1	(3211)	4351	3027	1029877
284	30.9	3.2	1.3	chr13	44193987	44194137	(70170191)	+	L2c	LINE/L2	2057	2210	(1209)	1029903
4058	15.3	1.9	2.7	chr13	44726599	44727295	(69637033)	+	LTR8	LTR/ERV1	1	691	(0)	1030842
2767	14.2	5.7	4.9	chr13	44727326	44727364	(69636964)	C	MER21A	LTR/ERVL	(22)	909	872	1030843
5320	6.4	3.0	0.0	chr13	44727365	44728034	(69636294)	+	LTR8	LTR/ERV1	1	691	(0)	1030844
1404	14.4	0.7	15.8	chr13	45418796	45419150	(68945178)	+	AluSx1	SINE/Alu	2	302	(10)	1032248
9206	11.5	2.6	0.1	chr13	45805011	45806734	(68557594)	+	L1PA16	LINE/L1	4408	6165	(1)	1032864
22	17.0	6.4	3.6	chr13	46211849	46211926	(68152402)	+	(GCCTC)n	Simple_repeat	1	83	(0)	1033525
1778	11.7	10.8	2.6	chr13	46932419	46932819	(67431509)	C	LTR14B	LTR/ERVK	(0)	608	1	1034646
2516	12.8	4.3	7.0	chr13	48031312	48031765	(66332563)	C	LTR59	LTR/ERV1	(2)	595	155	1036147
488	16.9	2.4	0.0	chr13	48031770	48031852	(66332476)	C	Alu	SINE/Alu	(8)	303	219	1036148
4322	6.7	7.1	3.8	chr13	48031853	48032439	(66331889)	C	LTR14B	LTR/ERVK	(0)	608	1	1036149
22	12.4	2.2	2.1	chr13	48233085	48233141	(66131187)	+	(CCCCGC)n	Simple_repeat	1	57	(0)	1036514
2172	11.5	0.3	0.3	chr13	48487077	48487362	(65876966)	C	AluSx3	SINE/Alu	(25)	286	1	1036894
1241	19.4	9.0	5.7	chr13	48487363	48487580	(65876748)	C	MSTA1	LTR/ERVL-MaLR	(246)	219	1	1036893
6238	12.4	3.3	0.5	chr13	48487611	48488734	(65875594)	+	L1MC1	LINE/L1	5188	6333	(0)	1036895
2241	14.6	11.7	0.8	chr13	48825321	48825700	(65538628)	C	MSTA	LTR/ERVL-MaLR	(1)	427	1	1037402
11162	12.2	3.9	0.9	chr13	48825701	48827281	(65537047)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	1037402
16332	17.6	6.1	4.6	chr13	48867527	48871312	(65493016)	C	HERVH-int	LTR/ERV1	(2693)	5020	1172	1037477
31	18.1	0.0	0.0	chr13	49652611	49652666	(64711662)	+	G-rich	Low_complexity	1	56	(0)	1038780
601	21.9	6.1	0.8	chr13	50225598	50225721	(64138607)	C	L2a	LINE/L2	(4)	3422	3292	1039796
251	28.6	14.7	1.2	chr13	52129297	52129466	(62234862)	C	MIRb	SINE/MIR	(33)	235	39	1042631
257	33.3	5.6	1.7	chr13	52448044	52448162	(61916166)	C	L2c	LINE/L2	(2)	3385	3262	1043127
2234	13.8	6.3	1.9	chr13	54320404	54320780	(60043548)	+	MSTB	LTR/ERVL-MaLR	1	395	(31)	1045745
3515	12.6	4.7	2.6	chr13	55874032	55874610	(58489718)	+	LTR14B	LTR/ERVK	17	608	(0)	1047699
32563	11.9	3.0	2.3	chr13	55874611	55879759	(58484569)	C	HERVP71A-int	LTR/ERV1	(2405)	5185	1	1047698
604	27.2	12.3	0.9	chr13	59187240	59187469	(55176859)	+	MIR	SINE/MIR	3	262	(0)	1051713
2137	12.8	0.0	0.0	chr13	60088640	60088921	(54275407)	C	AluSz	SINE/Alu	(30)	282	1	1052969
2162	17.5	6.1	1.0	chr13	61606501	61606904	(52757424)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1054982
8204	19.4	2.8	1.8	chr13	61606910	61607015	(52757313)	C	MSTB-int	LTR/ERVL-MaLR	(6)	1645	1540	1054982
2292	14.7	3.5	7.7	chr13	61607016	61607523	(52756805)	+	LTR19A	LTR/ERV1	1	486	(0)	1054983
1361	27.9	5.4	0.5	chr13	61846022	61846389	(52517939)	C	MLT1E1A	LTR/ERVL-MaLR	(9)	671	285	1055270
348	23.7	14.5	1.7	chr13	61846415	61846534	(52517794)	C	MLT1E1A	LTR/ERVL-MaLR	(515)	138	1	1055270
10972	18.8	3.9	2.3	chr13	62757707	62761085	(51603243)	+	L1MA9	LINE/L1	2881	6310	(2)	1056398
12	11.6	3.3	3.2	chr13	63261349	63261378	(51102950)	+	A-rich	Low_complexity	1	31	(0)	1057035
200	39.3	12.7	0.7	chr13	63261387	63261683	(51102645)	+	L2	LINE/L2	2490	2827	(592)	1057034
4779	20.6	10.2	5.7	chr13	63511282	63512484	(50851844)	+	LTR2752	LTR/ERV1	1	1263	(0)	1057382
958	16.1	6.7	3.7	chr13	63537163	63537407	(50826921)	+	L1M3e	LINE/L1	5297	5549	(1554)	1057407
846	21.8	1.9	7.8	chr13	63537374	63537592	(50826736)	+	L1MC1	LINE/L1	6121	6326	(7)	1057408
995	22.2	1.3	2.1	chr13	63537609	63537843	(50826485)	+	L1MC3	LINE/L1	7461	7693	(92)	1057409
15223	10.0	2.8	1.1	chr13	64119798	64121618	(50242710)	C	L1PA5	LINE/L1	(4320)	1864	4	1058147
5895	15.0	0.5	2.1	chr13	64133790	64135075	(50229253)	C	L1PB1	LINE/L1	(2772)	3374	2140	1058163
968	32.6	10.2	7.4	chr13	66007965	66009201	(48355127)	+	ERVL-E-int	LTR/ERVL	1356	2738	(3019)	1060515
8304	10.2	13.8	2.4	chr13	66009202	66010503	(48353825)	+	LTR12C	LTR/ERV1	3	1491	(88)	1060516
1800	21.6	6.7	4.6	chr13	66224563	66225061	(48139267)	C	MER67D	LTR/ERV1	(4)	510	1	1060777
466	28.2	11.7	5.8	chr13	66225062	66225158	(48139170)	+	MER20B	DNA/hAT-Charlie	152	276	(507)	1060776
2358	14.7	6.7	1.5	chr13	66225159	66225567	(48138761)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1060778
334	39.6	4.5	1.9	chr13	67043129	67043491	(47320837)	C	L2c	LINE/L2	(528)	2891	2519	1061789
232	27.8	3.2	0.0	chr13	67043644	67043733	(47320595)	C	MLT1L	LTR/ERVL-MaLR	(49)	561	469	1061790
2253	13.2	0.0	0.0	chr13	67243286	67243588	(47120740)	C	AluSx	SINE/Alu	(9)	303	1	1062019
1573	21.7	2.8	2.8	chr13	67243755	67244110	(47120218)	+	MLT1A0	LTR/ERVL-MaLR	10	365	(0)	1062020
320	31.1	1.5	3.6	chr13	67331390	67331526	(47032802)	C	MLT1N2	LTR/ERVL-MaLR	(13)	549	416	1062145
3012	16.1	6.2	14.9	chr13	67643325	67644168	(46720160)	C	LTR60B	LTR/ERV1	(0)	765	1	1062525
439	32.2	6.8	4.1	chr13	67710372	67710614	(46653714)	C	MIRb	SINE/MIR	(8)	260	8	1062607
239	34.0	4.0	4.0	chr13	67710608	67710757	(46653571)	C	L2	LINE/L2	(1344)	2075	1926	1062604
3799	18.4	2.8	0.6	chr13	68273019	68273713	(46090615)	C	MER50	LTR/ERV1	(23)	711	1	1063328
4538	18.7	2.9	1.5	chr13	70294944	70296393	(44067935)	+	L1MB1	LINE/L1	4663	6145	(23)	1065949
21	30.4	2.6	0.0	chr13	71864950	71865025	(42499303)	+	GA-rich	Low_complexity	1	78	(0)	1068013
16	33.7	0.0	0.0	chr13	71865169	71865221	(42499107)	+	(CA)n	Simple_repeat	1	53	(0)	1068014
1279	25.4	8.6	4.0	chr13	72430755	72431184	(41933144)	C	L2a	LINE/L2	(0)	3426	2975	1068774
16	8.3	0.0	0.0	chr13	72431273	72431298	(41933030)	+	(AGGG)n	Simple_repeat	1	26	(0)	1068775
712	30.2	3.4	5.4	chr13	72498894	72499101	(41865227)	+	L2	LINE/L2	19	219	(3200)	1068868
2193	10.3	1.7	0.3	chr13	72499102	72499393	(41864935)	C	AluSc	SINE/Alu	(13)	296	1	1068869
1387	22.3	9.4	2.1	chr13	73439478	73439908	(40924420)	C	MLT1D	LTR/ERVL-MaLR	(9)	496	31	1070558
2318	14.6	4.1	1.3	chr13	73646556	73646936	(40717392)	+	MSTB1	LTR/ERVL-MaLR	41	432	(0)	1070873
349	33.8	4.0	5.7	chr13	73744186	73744414	(40619914)	+	MIRc	SINE/MIR	4	228	(40)	1071021
1220	31.2	11.8	2.1	chr13	73884831	73885505	(40478823)	+	L2	LINE/L2	2017	2765	(654)	1071219
380	33.6	2.1	2.1	chr13	73885539	73885681	(40478647)	C	L2a	LINE/L2	(236)	3190	3048	1071215
335	27.3	0.0	3.3	chr13	73885899	73885989	(40478339)	C	L2a	LINE/L2	(811)	2608	2521	1071215
198	22.9	9.0	1.6	chr13	74035975	74036036	(40328292)	C	MIR3	SINE/MIR	(132)	76	10	1071399
289	27.7	10.5	0.8	chr13	74040216	74040335	(40323993)	C	L2a	LINE/L2	(5)	3421	3289	1071406
5945	17.3	5.0	0.9	chr13	74456349	74457337	(39906991)	+	L1MC2	LINE/L1	5317	6336	(8)	1071965
742	15.9	6.3	0.0	chr13	74457340	74457502	(39906826)	+	L1MB8	LINE/L1	1484	1657	(5860)	1071962
2242	17.9	2.8	1.0	chr13	75100732	75101149	(39263179)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1072838
1336	27.8	6.2	2.6	chr13	75184801	75185444	(39178884)	+	L1MD2	LINE/L1	290	1069	(5471)	1072945
1169	29.4	9.0	2.6	chr13	75931073	75931714	(38432614)	+	HAL1	LINE/L1	54	740	(1767)	1074074
11621	9.7	0.9	0.2	chr13	76727175	76728740	(37635588)	+	THE1A-int	LTR/ERVL-MaLR	1	1577	(3)	1075138
2469	10.5	0.6	2.8	chr13	76728744	76729106	(37635222)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1075138
804	28.1	9.3	4.5	chr13	76807664	76808040	(37556288)	+	MLT1J2	LTR/ERVL-MaLR	2	398	(50)	1075257
2444	13.9	5.6	0.0	chr13	76808075	76808477	(37555851)	+	MSTA	LTR/ERVL-MaLR	1	427	(1)	1075258
590	25.5	0.6	1.2	chr13	76969426	76969588	(37394740)	C	L2a	LINE/L2	(1)	3425	3264	1075519
543	30.3	6.0	3.1	chr13	76969612	76969839	(37394489)	+	LTR86A2	LTR/ERVL	64	298	(210)	1075520
1215	6.7	0.0	0.0	chr13	76979902	76980051	(37384277)	+	L1PA8	LINE/L1	6007	6156	(16)	1075543
26	0.0	0.0	3.3	chr13	76980053	76980082	(37384246)	+	(AAAAT)n	Simple_repeat	1	30	(0)	1075544
18	10.5	0.0	0.0	chr13	79481622	79481652	(34882676)	+	(TTTGT)n	Simple_repeat	1	31	(0)	1079007
2393	13.6	4.4	3.5	chr13	79751900	79752327	(34612001)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1079379
15	5.6	0.0	0.0	chr13	80096706	80096724	(34267604)	+	(A)n	Simple_repeat	1	19	(0)	1079765
1131	18.1	2.9	1.7	chr13	84850548	84850788	(29513540)	C	L1MB3	LINE/L1	(8)	6175	5932	1085771
888	15.4	0.2	0.2	chr13	84850789	84850931	(29513397)	C	L1PA15	LINE/L1	(29)	6137	5995	1085770
631	9.7	1.1	0.0	chr13	84850929	84851021	(29513307)	+	L1PA15	LINE/L1	5870	5963	(202)	1085770
7686	17.9	6.1	4.8	chr13	84868406	84869528	(29494800)	C	MER4-int	LTR/ERV1	(710)	5888	4755	1085794
1433	8.8	2.0	0.0	chr13	84869543	84869736	(29494592)	+	LTR14C	LTR/ERVK	390	587	(0)	1085796
17836	5.5	0.4	0.1	chr13	84869737	84871933	(29492395)	+	HERVK14C-int	LTR/ERVK	1	2202	(5232)	1085796
35931	6.4	0.6	0.5	chr13	84873737	84876707	(29487621)	+	HERVK14C-int	LTR/ERVK	4378	7434	(0)	1085796
803	21.7	1.1	4.5	chr13	84876708	84876736	(29487592)	C	MER4-int	LTR/ERV1	(2885)	5235	5214	1085798
4719	5.3	0.7	0.2	chr13	84876737	84877320	(29487008)	+	LTR14C	LTR/ERVK	1	587	(0)	1085799
7029	20.1	10.6	3.2	chr13	84961053	84962668	(29401660)	C	MER52A	LTR/ERV1	(1)	1754	4	1085922
3329	24.5	2.5	3.1	chr13	85093884	85094828	(29269500)	+	LTR53-int	LTR/ERVL	2134	3555	(1)	1086089
2022	11.3	9.2	4.9	chr13	87355329	87355744	(27008584)	C	LTR14B	LTR/ERVK	(0)	608	1	1088910
299	29.6	8.3	7.7	chr13	87508081	87508278	(26856050)	C	L2c	LINE/L2	(4)	3422	3191	1089093
3020	14.6	8.8	1.4	chr13	90002218	90002781	(24361547)	+	MER4B	LTR/ERV1	1	610	(0)	1092383
2378	17.9	9.2	8.7	chr13	90002782	90003426	(24360902)	C	LTR8A	LTR/ERV1	(64)	663	1	1092382
298	25.7	10.7	0.0	chr13	91216284	91216392	(23147936)	+	Charlie15a	DNA/hAT-Charlie	102	223	(1)	1093944
5038	18.1	6.7	2.2	chr13	92188789	92191791	(22172537)	+	L1MC1	LINE/L1	3	2676	(3645)	1095269
272	9.1	0.0	4.3	chr13	93039395	93039440	(21324888)	+	LTR14B	LTR/ERVK	3	46	(562)	1096358
2032	11.5	10.6	3.5	chr13	93039429	93039797	(21324531)	+	LTR14B	LTR/ERVK	211	608	(0)	1096358
5538	7.2	2.7	0.8	chr13	93039798	93040549	(21323779)	+	HERVK14-int	LTR/ERVK	1	767	(5329)	1096358
294	21.4	8.0	4.6	chr13	93249894	93250001	(21114327)	C	LTR81B	LTR/Gypsy	(56)	1337	1226	1096633
1926	13.6	15.9	0.6	chr13	93588497	93588858	(20775470)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1097088
18	0.0	0.0	0.0	chr13	94962775	94962794	(19401534)	+	(T)n	Simple_repeat	1	20	(0)	1099177
230	27.1	10.1	3.6	chr13	94962844	94962954	(19401374)	C	L2c	LINE/L2	(1)	3386	3268	1099178
212	34.8	10.8	2.2	chr13	94978572	94978706	(19385622)	+	MIRb	SINE/MIR	3	150	(118)	1099197
1729	19.0	5.3	5.7	chr13	96020828	96021285	(18343043)	C	LTR40c	LTR/ERVL	(9)	456	1	1100994
1067	27.2	1.6	7.7	chr13	97582289	97582626	(16781702)	C	Arthur1B	DNA/hAT-Tip100	(908)	317	1	1103218
182	14.3	0.0	0.0	chr13	97582627	97582661	(16781667)	+	L2a	LINE/L2	3392	3426	(0)	1103219
248	29.9	9.3	1.7	chr13	98272603	98272721	(16091607)	+	MER117	DNA/hAT-Charlie	30	158	(39)	1104413
1627	19.1	5.2	3.6	chr13	98272926	98273576	(16090752)	C	MER49	LTR/ERV1	(0)	903	1	1104414
14	12.6	5.7	0.0	chr13	98576055	98576089	(15788239)	+	(GTCCCGG)n	Simple_repeat	1	37	(0)	1104829
12	14.6	0.0	5.9	chr13	98576268	98576301	(15788027)	+	(CCCG)n	Simple_repeat	1	34	(0)	1104830
2256	14.7	8.6	0.5	chr13	98724895	98725291	(15639037)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1105152
1691	15.7	14.2	0.0	chr13	99403880	99404243	(14960085)	C	MSTB	LTR/ERVL-MaLR	(0)	426	3	1106187
588	24.7	2.0	1.3	chr13	109421269	109421453	(4942875)	C	L1PA17	LINE/L1	(1)	6165	5969	1120032
17	18.5	0.0	0.0	chr13	111467969	111467999	(2896329)	+	GA-rich	Low_complexity	1	31	(0)	1122562
462	15.4	6.3	0.6	chr13	111620881	111621933	(2742395)	+	(TG)n	Simple_repeat	1	1119	(0)	1122737
2233	10.3	0.0	0.0	chr13	112129279	112129580	(2234748)	+	AluSc8	SINE/Alu	1	302	(9)	1123206
3341	21.9	2.5	1.1	chr13	112129581	112130086	(2234242)	+	L1MA7	LINE/L1	5779	6290	(1)	1123205
2951	0.0	0.0	0.0	chr13	112578278	112578586	(1785742)	+	AluYk12	SINE/Alu	1	309	(2)	1123649
4587	5.0	4.1	2.2	chr13	112578587	112578877	(1785451)	+	LTR14B	LTR/ERVK	309	608	(0)	1123648
751	22.5	9.8	1.5	chr13	112578878	112579100	(1785228)	+	L1MEf	LINE/L1	5382	5629	(908)	1123643
785	22.3	7.4	0.0	chr13	112971936	112972110	(1392218)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1124106
13	15.6	2.0	7.8	chr13	113296931	113296980	(1067348)	+	(CTTCCT)n	Simple_repeat	1	51	(0)	1124474
2358	4.0	0.7	0.0	chr13	113363228	113363503	(1000825)	C	AluSx3	SINE/Alu	(32)	279	2	1124587
530	27.9	10.3	0.5	chr13	113774010	113774218	(590110)	C	L1MC5	LINE/L1	(0)	9304	9073	1125019
281	17.4	4.3	3.2	chr13	113774499	113775247	(589081)	+	(CACACAC)n	Simple_repeat	1	781	(0)	1125020
2310	12.4	0.0	0.3	chr14	18677780	18678069	(88365649)	C	AluSx1	SINE/Alu	(23)	289	1	1126045
26	0.0	0.0	0.0	chr14	18678070	18678094	(88365624)	+	(T)n	Simple_repeat	1	25	(0)	1126046
254	24.5	9.7	5.6	chr14	18678199	18678306	(88365412)	+	MIR	SINE/MIR	81	193	(69)	1126047
967	27.2	8.1	6.7	chr14	18678523	18678828	(88364890)	+	L1ME4b	LINE/L1	3	173	(719)	1126048
13	20.1	0.0	2.8	chr14	23352904	23352939	(83690779)	+	(TCCCC)n	Simple_repeat	1	36	(0)	1132748
271	34.3	4.7	5.9	chr14	23353158	23353309	(83690409)	C	L2c	LINE/L2	(0)	3387	3238	1132749
14	24.3	1.5	6.1	chr14	28766590	28766596	(78277122)	+	(GCGG)n	Simple_repeat	1	61	(0)	1139686
12	21.8	1.9	5.6	chr14	28766597	28766649	(78277069)	+	G-rich	Low_complexity	1	54	(0)	1139687
835	33.2	11.9	3.2	chr14	29929709	29930487	(77113231)	C	L2a	LINE/L2	(13)	3413	2576	1141166
17	22.0	0.0	5.2	chr14	32077144	32077212	(74966506)	+	G-rich	Low_complexity	1	65	(0)	1144639
13	21.4	2.1	4.2	chr14	32077304	32077356	(74966362)	+	GA-rich	Low_complexity	1	51	(0)	1144640
15	17.7	0.0	0.0	chr14	32077370	32077401	(74966317)	+	(CGC)n	Simple_repeat	1	32	(0)	1144641
2147	11.3	2.3	0.3	chr14	32992873	32993172	(74050546)	+	AluSq2	SINE/Alu	1	306	(7)	1145861
310	31.9	9.1	6.0	chr14	32993173	32993301	(74050417)	C	L2	LINE/L2	(960)	2459	2330	1145860
484	29.2	5.2	8.2	chr14	33785864	33786143	(73257575)	C	MLT1L	LTR/ERVL-MaLR	(229)	381	111	1146744
325	14.8	1.8	0.0	chr14	34383927	34383980	(72659738)	+	MER5A1	DNA/hAT-Charlie	51	105	(61)	1147702
303	32.7	4.3	1.8	chr14	34384072	34384183	(72659535)	+	L2c	LINE/L2	3273	3387	(0)	1147703
474	30.2	4.7	0.0	chr14	34683140	34683301	(72360417)	C	MIRb	SINE/MIR	(36)	232	63	1148414
327	18.2	9.1	3.5	chr14	34933617	34933730	(72109988)	C	L1ME3E	LINE/L1	(0)	6242	6122	1148974
865	12.6	3.8	0.0	chr14	34933744	34933870	(72109848)	+	AluJo	SINE/Alu	5	136	(176)	1148975
2059	13.2	3.6	0.0	chr14	34933871	34934166	(72109552)	+	AluSc	SINE/Alu	1	307	(2)	1148976
3578	20.6	10.1	4.5	chr14	35814176	35814436	(71229282)	C	Charlie1a	DNA/hAT-Charlie	(208)	1247	969	1150669
1365	14.1	4.3	1.4	chr14	35814437	35814659	(71229059)	C	L1PA16	LINE/L1	(9)	6157	5928	1150670
3578	20.6	10.1	4.5	chr14	35814660	35814947	(71228771)	C	Charlie1a	DNA/hAT-Charlie	(487)	968	652	1150669
882	28.9	11.0	1.9	chr14	36128696	36129154	(70914564)	+	LTR33	LTR/ERVL	2	503	(12)	1151192
1038	20.9	1.3	9.4	chr14	36129155	36129408	(70914310)	+	LTR16A1	LTR/ERVL	1	233	(223)	1151193
585	29.6	10.8	0.6	chr14	36129411	36129757	(70913961)	+	L1ME3Cz	LINE/L1	4689	5075	(1071)	1151194
14	19.1	0.0	2.6	chr14	37591932	37591969	(69451749)	+	(GCTCCC)n	Simple_repeat	1	38	(0)	1153166
2578	7.2	6.7	0.3	chr14	38461728	38462103	(68581615)	C	L1PA11	LINE/L1	(3)	6171	5770	1154279
1348	17.8	4.0	0.0	chr14	39534136	39534373	(67509345)	+	MER31A	LTR/ERV1	152	399	(86)	1155856
2813	12.9	6.5	0.0	chr14	39534374	39534823	(67508895)	C	MER9a3	LTR/ERVK	(0)	512	32	1155857
274	28.9	5.1	7.9	chr14	41416952	41417154	(65626564)	+	MLT1J-int	LTR/ERVL-MaLR	460	656	(731)	1158052
330	31.6	4.2	0.0	chr14	41417316	41417429	(65626289)	+	MLT1J-int	LTR/ERVL-MaLR	807	925	(462)	1158052
28	23.1	0.0	3.7	chr14	44897468	44897548	(62146170)	+	(GGC)n	Simple_repeat	1	81	(0)	1162310
828	10.6	0.0	0.0	chr14	45271927	45272039	(61771679)	C	L1MC1	LINE/L1	(17)	6316	6204	1162964
16	10.0	0.0	0.0	chr14	45272163	45272184	(61771534)	+	(T)n	Simple_repeat	1	22	(0)	1162965
2208	17.2	1.6	5.3	chr14	47339365	47339813	(59703905)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1165461
969	28.7	6.8	4.7	chr14	48435051	48435165	(58608553)	C	L1MEg	LINE/L1	(4109)	2133	2013	1166744
1885	19.6	6.6	2.5	chr14	48435166	48435573	(58608145)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1166748
337	31.0	4.9	0.0	chr14	51581307	51581422	(55462296)	C	L2c	LINE/L2	(0)	3387	3266	1171685
13	25.5	3.1	7.1	chr14	53946722	53946817	(53096901)	+	G-rich	Low_complexity	1	99	(0)	1175250
54	0.0	0.0	0.0	chr14	54344373	54344418	(52699300)	+	(AC)n	Simple_repeat	1	46	(0)	1175794
1309	23.6	7.6	8.7	chr14	54344420	54345253	(52698465)	+	L2a	LINE/L2	2587	3426	(0)	1175795
50	33.1	1.9	1.4	chr14	55372527	55372737	(51670981)	+	(CTCC)n	Simple_repeat	1	215	(0)	1177563
1253	29.8	13.2	4.5	chr14	59467460	59468106	(47575612)	+	L2c	LINE/L2	2126	2853	(566)	1183745
2476	9.2	0.0	1.9	chr14	61807125	61807439	(45236279)	C	AluSc5	SINE/Alu	(0)	309	1	1187102
286	36.2	6.1	1.0	chr14	62410927	62411127	(44632591)	+	MLT1K	LTR/ERVL-MaLR	382	593	(2)	1187870
23	25.5	4.3	2.1	chr14	63728076	63728168	(43315550)	+	(GCCGC)n	Simple_repeat	1	97	(0)	1189892
22	6.7	0.0	0.0	chr14	64503857	64503888	(42539830)	+	(GTGC)n	Simple_repeat	1	32	(0)	1191408
13	9.3	0.0	0.0	chr14	64503883	64503905	(42539813)	+	(GCCC)n	Simple_repeat	1	23	(0)	1191409
30	5.5	0.0	0.0	chr14	68548294	68548331	(38495387)	+	(GCCCA)n	Simple_repeat	1	38	(0)	1197866
312	13.1	0.0	0.0	chr14	68844264	68844324	(38199394)	C	L1MA4	LINE/L1	(0)	6300	6240	1198345
690	20.2	0.8	0.0	chr14	68844364	68844487	(38199231)	C	FLAM_C	SINE/Alu	(18)	125	1	1198346
3353	14.5	4.3	1.2	chr14	68844489	68845078	(38198640)	C	L1MA4	LINE/L1	(46)	6254	5644	1198345
3015	16.4	3.3	4.9	chr14	68923681	68924294	(38119424)	+	L1MB3	LINE/L1	5570	6173	(10)	1198491
208	36.2	2.3	7.6	chr14	68924494	68924678	(38119040)	C	L2c	LINE/L2	(497)	2922	2748	1198489
8247	7.9	15.5	14.6	chr14	70255024	70256182	(36787536)	+	LTR12C	LTR/ERV1	446	1579	(0)	1200924
16	0.0	0.0	0.0	chr14	70735367	70735383	(36308335)	+	(T)n	Simple_repeat	1	17	(0)	1201645
1606	16.0	16.4	5.0	chr14	71989910	71990311	(35053407)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	1203622
2272	17.4	3.4	0.2	chr14	73422491	73422888	(33620830)	C	MSTB	LTR/ERVL-MaLR	(15)	411	1	1206225
16	0.0	0.0	0.0	chr14	73422909	73422925	(33620793)	+	(A)n	Simple_repeat	1	17	(0)	1206226
378	28.5	17.2	3.5	chr14	73422944	73423143	(33620575)	C	MIRc	SINE/MIR	(33)	235	3	1206227
288	32.4	11.7	6.9	chr14	73940370	73940744	(33102974)	+	L2b	LINE/L2	2975	3369	(6)	1207431
277	26.3	1.3	3.8	chr14	74573240	74573318	(32470400)	+	MIRb	SINE/MIR	113	189	(79)	1208760
1338	26.4	15.5	0.7	chr14	74573325	74573759	(32469959)	+	LTR33	LTR/ERVL	1	511	(4)	1208761
1881	17.7	0.0	0.0	chr14	75880925	75881212	(31162506)	C	AluJb	SINE/Alu	(23)	289	2	1211240
2422	13.8	6.3	3.0	chr14	77071629	77072069	(29971649)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	1213553
13	28.1	4.7	0.0	chr14	77235448	77235511	(29808207)	+	G-rich	Low_complexity	1	67	(0)	1213871
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
2331	5.5	9.7	0.0	chr14	79736538	79736846	(27306872)	C	LTR14A	LTR/ERVK	(0)	344	3	1218248
2284	15.0	4.5	2.4	chr14	81317041	81317381	(25726337)	C	MSTB	LTR/ERVL-MaLR	(71)	355	6	1220447
1779	24.8	8.6	5.8	chr14	87673793	87673948	(19369770)	C	L1MC3	LINE/L1	(217)	7568	7399	1229316
1701	15.9	4.1	0.0	chr14	87673949	87674274	(19369444)	C	L1MC1	LINE/L1	(0)	6333	5994	1229318
1779	24.8	8.6	5.8	chr14	87674275	87674798	(19368920)	C	L1MC3	LINE/L1	(387)	7398	6850	1229316
975	28.0	5.8	2.8	chr14	89773560	89773959	(17269759)	+	MLT2F	LTR/ERVL	1	413	(250)	1232705
6359	9.2	4.9	3.7	chr14	91556531	91558390	(15485328)	C	SVA_D	Retroposon/SVA	(1)	1385	8	1235941
39	0.0	0.0	0.0	chr14	91558396	91558431	(15485287)	+	(GGGAGA)n	Simple_repeat	1	36	(0)	1235942
24448	7.3	0.7	0.4	chr14	91558433	91560849	(15482869)	+	L1PA10	LINE/L1	2024	4446	(1885)	1235939
12	13.1	2.7	5.3	chr14	91836330	91836366	(15207352)	+	(CGCCGG)n	Simple_repeat	1	38	(0)	1236377
178	10.8	0.6	4.0	chr14	92179132	92179450	(14864268)	+	GA-rich	Low_complexity	3	310	(0)	1237040
200	17.1	0.0	0.0	chr14	92179461	92179495	(14864223)	C	MIRb	SINE/MIR	(185)	83	49	1237041
17	19.1	7.2	2.7	chr14	92179641	92179709	(14864009)	+	GA-rich	Low_complexity	1	74	(0)	1237042
2784	12.2	1.2	0.9	chr14	92243804	92244234	(14799484)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	1237171
4175	22.4	11.2	2.5	chr14	92244235	92245592	(14798126)	C	MSTB1-int	LTR/ERVL-MaLR	(0)	1580	49	1237171
971	27.1	8.3	13.8	chr14	92536966	92537627	(14506091)	C	L1ME4b	LINE/L1	(3)	889	267	1237731
920	25.8	3.2	2.2	chr14	92902440	92902716	(14141002)	C	LTR16E1	LTR/ERVL	(2)	536	257	1238476
2381	9.3	0.3	0.0	chr14	93112438	93112737	(13930981)	C	AluSc8	SINE/Alu	(10)	301	1	1238814
241	33.2	7.7	4.5	chr14	94126497	94126783	(12916935)	+	L2c	LINE/L2	3054	3350	(37)	1240668
2277	16.1	5.2	0.5	chr14	94126811	94127216	(12916502)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1240669
360	35.6	2.2	0.0	chr14	95753145	95753321	(11290397)	+	MIRb	SINE/MIR	11	191	(77)	1243649
5732	9.3	2.2	0.9	chr14	96073350	96074204	(10969514)	+	L1PA11	LINE/L1	5307	6172	(2)	1244202
9044	22.0	3.8	5.2	chr14	96074201	96076515	(10967203)	C	L1ME1	LINE/L1	(1015)	5716	3462	1244201
1835	14.2	1.0	3.3	chr14	96233032	96233333	(10810385)	C	AluJb	SINE/Alu	(17)	295	1	1244506
439	23.4	7.9	4.1	chr14	96233334	96233439	(10810279)	C	MER39	LTR/ERV1	(165)	542	422	1244505
321	30.7	0.0	0.0	chr14	96233536	96233623	(10810095)	C	MER34	LTR/ERV1	(446)	96	9	1244507
862	25.7	11.0	4.8	chr14	96795450	96795927	(10247791)	C	LTR33	LTR/ERVL	(4)	511	1	1245546
273	33.3	8.5	4.5	chr14	97052962	97053240	(9990478)	C	L2b	LINE/L2	(70)	3317	3000	1245984
1029	23.2	4.6	0.4	chr14	97429788	97430016	(9613702)	C	MLT1A1	LTR/ERVL-MaLR	(169)	239	1	1246701
1405	23.4	3.5	1.2	chr14	97719105	97719442	(9324276)	C	MLT1A0	LTR/ERVL-MaLR	(19)	346	1	1247164
1834	20.7	1.6	0.0	chr14	97719443	97719799	(9323919)	C	MLT1A0-int	LTR/ERVL-MaLR	(0)	1735	1373	1247164
3089	18.8	4.1	0.2	chr14	98804572	98805156	(8238562)	+	L1MB3	LINE/L1	5575	6183	(0)	1248975
228	16.9	6.6	9.0	chr14	100154394	100154471	(6889247)	+	MIR3	SINE/MIR	65	144	(86)	1251288
427	29.8	11.8	2.6	chr14	100221769	100222210	(6821508)	C	L2c	LINE/L2	(97)	3290	2803	1251465
851	27.5	17.0	1.5	chr14	100222311	100222772	(6820946)	C	LTR67B	LTR/ERVL	(31)	589	42	1251466
1271	10.1	2.6	0.0	chr14	100876578	100876766	(6166952)	C	L1PB1	LINE/L1	(1)	6150	5957	1252512
3493	19.3	4.7	2.4	chr14	101339029	101340019	(5703699)	C	MER49	LTR/ERV1	(10)	913	1	1253016
308	15.4	4.4	0.0	chr14	101947757	101947821	(5095897)	C	Charlie4z	DNA/hAT-Charlie	(98)	69	2	1253923
483	18.2	6.7	3.1	chr14	102524748	102524877	(4518841)	+	MLT1M	LTR/ERVL-MaLR	121	255	(417)	1255087
191	31.9	1.4	1.4	chr14	102925712	102925781	(4117937)	C	L2b	LINE/L2	(0)	3375	3306	1255909
2719	13.9	7.9	7.5	chr14	103169999	103170589	(3873129)	+	LTR14B	LTR/ERVK	15	608	(0)	1256306
8626	9.9	0.0	0.1	chr14	103170590	103171789	(3871929)	+	HERVK14-int	LTR/ERVK	1	1199	(4897)	1256306
209	20.0	0.0	0.0	chr14	104150629	104150668	(2893050)	+	MIR3	SINE/MIR	115	154	(54)	1258145
3349	18.0	4.3	2.1	chr14	104259500	104260156	(2783562)	+	L1MCa	LINE/L1	2	673	(5835)	1258239
1922	26.5	8.1	3.8	chr14	104625967	104626343	(2417375)	+	L1MC4a	LINE/L1	5640	6055	(1895)	1258600
2209	13.8	8.7	2.5	chr14	104626344	104626744	(2416974)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1258615
13	13.2	6.1	0.0	chr14	104882458	104882490	(2161228)	+	(CAGG)n	Simple_repeat	1	35	(0)	1258962
18	23.5	4.1	2.6	chr14	106790430	106790502	(253216)	+	A-rich	Low_complexity	1	76	(0)	1261072
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
246	35.1	13.3	2.3	chr15	25413729	25414215	(76576974)	+	L2	LINE/L2	1974	2522	(897)	1269960
188	36.2	3.2	1.3	chr15	27832273	27832426	(74158763)	+	L2	LINE/L2	2727	2883	(536)	1273110
1939	11.9	5.7	1.1	chr15	27832831	27833115	(74158074)	C	AluSx	SINE/Alu	(13)	299	1	1273111
2364	9.7	0.0	0.0	chr15	29015977	29016285	(72974904)	+	AluSc5	SINE/Alu	1	309	(0)	1274875
55	25.1	1.7	3.8	chr15	32936615	32936794	(69054395)	+	GA-rich	Low_complexity	1	183	(0)	1280603
2208	12.7	3.8	0.6	chr15	35435414	35435747	(66555442)	+	MER61C	LTR/ERV1	84	428	(0)	1284353
566	25.9	1.8	7.8	chr15	35435748	35435927	(66555262)	+	HUERS-P3b-int	LTR/ERV1	2	170	(5047)	1284353
311	27.1	0.0	2.3	chr15	35436098	35436184	(66555005)	+	HUERS-P3b-int	LTR/ERV1	272	356	(4861)	1284353
4018	10.9	9.3	1.1	chr15	38523296	38523955	(63467234)	+	Tigger3b	DNA/TcMar-Tigger	487	1206	(25)	1288454
440	33.4	11.5	4.6	chr15	38524091	38524103	(63467086)	C	L2	LINE/L2	(1043)	2376	2365	1288452
787	16.7	0.0	9.0	chr15	38524104	38524248	(63466941)	+	FLAM_C	SINE/Alu	1	132	(1)	1288455
440	33.4	11.5	4.6	chr15	38524249	38524890	(63466299)	C	L2	LINE/L2	(1055)	2364	1670	1288452
10797	8.7	7.2	0.3	chr15	40013786	40015255	(61975934)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1290527
646	28.4	4.0	0.6	chr15	40039382	40039609	(61951580)	+	MIR	SINE/MIR	28	262	(0)	1290566
18	17.8	0.0	0.0	chr15	40807703	40807740	(61183449)	+	G-rich	Low_complexity	1	38	(0)	1291968
538	27.1	13.7	0.5	chr15	40807895	40808104	(61183085)	+	MIRc	SINE/MIR	4	240	(28)	1291969
655	29.3	4.3	2.8	chr15	50271471	50271719	(51719470)	C	MIRb	SINE/MIR	(14)	254	2	1307393
11	13.2	5.7	2.7	chr15	50271857	50271891	(51719298)	+	A-rich	Low_complexity	1	37	(0)	1307394
2580	8.5	11.0	0.7	chr15	51282244	51282688	(50708501)	+	LTR14B	LTR/ERVK	1	608	(0)	1309325
6243	5.8	1.0	0.1	chr15	51282689	51283461	(50707728)	+	HERVK14-int	LTR/ERVK	1	780	(5316)	1309325
516	33.5	1.6	1.6	chr15	57095868	57096049	(44895140)	C	MIRc	SINE/MIR	(84)	184	3	1318145
2722	19.3	15.3	1.2	chr15	58270015	58270659	(43720530)	+	LTR41B	LTR/ERVL	6	757	(1)	1319877
1692	13.6	13.0	1.7	chr15	58558470	58558769	(43432420)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1320391
16	23.0	0.0	0.0	chr15	59992351	59992388	(41998801)	+	GA-rich	Low_complexity	1	38	(0)	1323092
12	8.8	4.2	0.0	chr15	60759292	60759315	(41231874)	+	(ACAT)n	Simple_repeat	1	25	(0)	1324282
2271	12.4	0.3	0.6	chr15	61651780	61652093	(40339096)	C	AluSp	SINE/Alu	(0)	313	1	1325683
412	25.0	9.3	5.5	chr15	61937758	61937805	(40053384)	+	MIRb	SINE/MIR	127	173	(95)	1326111
286	30.1	16.2	7.5	chr15	61937916	61938597	(40052592)	+	MamRep1527	LTR	4	756	(213)	1326113
12050	7.5	0.6	0.7	chr15	62216526	62216710	(39774479)	C	HERVK14-int	LTR/ERVK	(5911)	185	2	1326530
2231	7.9	0.6	17.4	chr15	62216712	62217124	(39774065)	C	LTR14A	LTR/ERVK	(1)	343	1	1326530
3976	12.9	0.5	4.4	chr15	62269578	62270210	(39720979)	C	LTR14B	LTR/ERVK	(0)	608	1	1326606
2286	10.3	0.3	0.3	chr15	63932184	63932494	(38058695)	+	AluSp	SINE/Alu	1	311	(2)	1329418
17	4.0	0.0	3.6	chr15	63932531	63932558	(38058631)	+	(TTTA)n	Simple_repeat	1	28	(0)	1329419
608	28.8	4.3	3.0	chr15	63932782	63933078	(38058111)	C	L1ME3E	LINE/L1	(293)	5949	5649	1329420
1793	11.4	2.7	5.0	chr15	64951271	64955041	(37036148)	+	(TTC)n	Simple_repeat	1	3874	(0)	1331580
8463	10.8	11.0	1.7	chr15	65300211	65301637	(36689552)	C	LTR12C	LTR/ERV1	(0)	1579	3	1332337
46	0.0	0.0	0.0	chr15	65368161	65368199	(36622990)	+	(CA)n	Simple_repeat	1	39	(0)	1332471
1553	13.4	1.3	11.9	chr15	66082517	66082690	(35908499)	+	AluSx	SINE/Alu	134	300	(12)	1333952
188	26.9	3.1	13.1	chr15	66356305	66356411	(35634778)	C	L2c	LINE/L2	(1)	3386	3291	1334509
1436	13.6	6.6	9.0	chr15	66356914	66357223	(35633966)	C	AluJb	SINE/Alu	(9)	303	2	1334510
12	10.3	6.1	2.9	chr15	66766185	66766217	(35224972)	+	G-rich	Low_complexity	1	35	(0)	1335414
508	24.6	10.5	2.7	chr15	66766355	66766541	(35224648)	+	MIRb	SINE/MIR	17	220	(48)	1335415
456	27.2	12.2	0.6	chr15	66901414	66901594	(35089595)	C	MIR	SINE/MIR	(11)	251	47	1335673
19	19.5	3.1	8.1	chr15	68818107	68818202	(33172987)	+	(CCGCGCC)n	Simple_repeat	1	99	(0)	1339116
13	19.4	0.0	2.7	chr15	68818487	68818523	(33172666)	+	(GCCCCC)n	Simple_repeat	1	37	(0)	1339117
23	12.4	0.0	0.0	chr15	69129061	69129095	(32862094)	+	(AG)n	Simple_repeat	1	35	(0)	1339685
1035	24.9	6.4	2.0	chr15	69321255	69321611	(32669578)	C	L1MC5	LINE/L1	(1)	9303	8930	1339994
133	11.3	0.9	0.5	chr15	69322683	69322885	(32668304)	+	(AAG)n	Simple_repeat	1	204	(0)	1339998
595	32.6	4.4	5.2	chr15	70809010	70809239	(31181950)	+	MIRb	SINE/MIR	18	245	(23)	1342782
310	30.8	6.2	2.9	chr15	71698108	71698289	(30292900)	C	L2c	LINE/L2	(3)	3372	3190	1344190
1587	20.2	2.1	1.2	chr15	71698304	71698633	(30292556)	+	L1M2	LINE/L1	5459	5791	(509)	1344191
717	26.5	20.0	3.2	chr15	71791534	71791720	(30199469)	C	L2a	LINE/L2	(0)	3426	3237	1344373
1738	16.8	0.7	3.0	chr15	71791721	71792024	(30199165)	+	AluJo	SINE/Alu	14	310	(2)	1344374
717	26.5	20.0	3.2	chr15	71792025	71792238	(30198951)	C	L2a	LINE/L2	(190)	3236	2942	1344373
317	28.8	0.0	0.0	chr15	71792420	71792499	(30198690)	+	L1ME4c	LINE/L1	343	422	(408)	1344375
337	28.9	5.5	4.6	chr15	71792502	71792697	(30198492)	+	Charlie29a	DNA/hAT-Charlie	30	227	(492)	1344376
21	10.8	0.0	0.0	chr15	72208426	72208455	(29782734)	+	(A)n	Simple_repeat	1	30	(0)	1345076
952	19.6	5.6	1.4	chr15	72721997	72722203	(29268986)	C	MER58A	DNA/hAT-Charlie	(0)	224	9	1345999
1549	19.7	12.1	9.3	chr15	72894775	72895389	(29095800)	C	L1ME1	LINE/L1	(23)	6156	5522	1346277
8121	9.8	15.2	0.7	chr15	73731363	73732696	(28258493)	C	LTR12C	LTR/ERV1	(0)	1579	17	1347622
12	13.9	0.0	0.0	chr15	74128630	74128653	(27862536)	+	(GAAA)n	Simple_repeat	1	24	(0)	1348309
248	30.5	9.9	1.3	chr15	74599214	74599369	(27391820)	C	MLT1O	LTR/ERVL-MaLR	(279)	263	93	1349164
19	3.8	0.0	0.0	chr15	74784388	74784422	(27206767)	+	(TTTTA)n	Simple_repeat	1	35	(0)	1349519
2413	9.1	0.0	0.0	chr15	74872131	74872428	(27118761)	+	AluSx	SINE/Alu	1	298	(14)	1349664
951	24.8	9.7	5.6	chr15	74889338	74889909	(27101280)	+	L2a	LINE/L2	2817	3426	(0)	1349709
10215	5.6	12.7	0.7	chr15	75115126	75116511	(26874678)	C	LTR12C	LTR/ERV1	(0)	1579	2	1350210
1248	12.1	0.0	2.8	chr15	75307446	75307610	(26683579)	+	AluSg4	SINE/Alu	131	295	(15)	1350533
659	17.1	3.7	0.0	chr15	75307927	75308055	(26683134)	+	MER94	DNA/hAT-Blackjack	1	134	(0)	1350535
375	24.1	6.1	0.0	chr15	75335581	75335688	(26655501)	+	L1ME3A	LINE/L1	6043	6157	(16)	1350597
428	32.9	2.8	2.8	chr15	75346838	75347068	(26644121)	+	L2b	LINE/L2	2866	3093	(282)	1350628
18	26.4	0.0	7.7	chr15	75651962	75651990	(26339199)	+	(TCCTCT)n	Simple_repeat	1	68	(23)	1351308
18	20.3	3.7	1.8	chr15	75651991	75651996	(26339193)	+	(TCTT)n	Simple_repeat	1	10	(46)	1351309
16	13.2	0.0	0.0	chr15	75651997	75652021	(26339168)	+	(T)n	Simple_repeat	1	25	(0)	1351310
18	20.3	3.7	1.8	chr15	75652022	75652044	(26339145)	+	(TCTT)n	Simple_repeat	11	56	(0)	1351309
18	26.4	0.0	7.7	chr15	75652045	75652052	(26339137)	+	(TCCTCT)n	Simple_repeat	69	91	(0)	1351308
479	25.0	0.9	0.0	chr15	75652069	75652176	(26339013)	+	MIR3	SINE/MIR	45	153	(55)	1351311
2522	6.1	0.0	0.0	chr15	75741001	75741296	(26249893)	+	AluY	SINE/Alu	1	296	(15)	1351439
2680	25.7	5.3	2.7	chr15	76002171	76003363	(25987826)	+	L1MEg	LINE/L1	3125	4347	(3107)	1351855
1952	9.0	0.3	23.3	chr15	76269234	76269680	(25721509)	+	LTR14A	LTR/ERVK	1	344	(0)	1352289
473	15.9	5.7	0.0	chr15	76269681	76269803	(25721386)	+	L1MEf	LINE/L1	4678	4805	(2130)	1352274
1030	16.6	11.1	4.0	chr15	76269788	76270158	(25721031)	+	L1MEf	LINE/L1	5974	6373	(866)	1352274
12	10.3	6.1	2.9	chr15	76515273	76515305	(25475884)	+	(GAGT)n	Simple_repeat	1	35	(0)	1352696
6139	22.4	3.5	6.5	chr15	76552312	76554785	(25436404)	+	L1PA15	LINE/L1	1388	3832	(4323)	1352759
2060	11.0	14.6	0.9	chr15	78712785	78713208	(23277981)	+	LTR14B	LTR/ERVK	1	608	(0)	1356465
2543	26.8	7.2	3.3	chr15	78713223	78714272	(23276917)	C	HAL1	LINE/L1	(110)	2397	1304	1356466
231	35.5	0.0	0.0	chr15	79332413	79332488	(22658701)	C	L1MEj	LINE/L1	(2081)	79	4	1357687
921	34.4	10.7	2.4	chr15	79332641	79333446	(22657743)	+	L4_B_Mam	LINE/RTE-X	1343	2223	(2718)	1357688
16	15.9	0.0	0.0	chr15	79569992	79570019	(22421170)	+	A-rich	Low_complexity	1	28	(0)	1358047
12	27.4	0.0	0.0	chr15	79570121	79570157	(22421032)	+	GA-rich	Low_complexity	1	37	(0)	1358048
418	28.2	5.5	1.8	chr15	79590235	79590442	(22400747)	C	MER102c	DNA/hAT-Charlie	(73)	258	64	1358072
190	17.4	9.8	0.0	chr15	80906494	80906539	(21084650)	+	MIR3	SINE/MIR	95	145	(63)	1360323
2375	8.8	1.0	0.0	chr15	80907281	80907587	(21083602)	+	AluSx1	SINE/Alu	1	310	(2)	1360324
221	20.8	0.0	2.0	chr15	80923283	80923331	(21067858)	+	L3	LINE/CR1	2101	2148	(1951)	1360358
1720	16.2	2.0	2.7	chr15	81102386	81102681	(20888508)	+	AluJo	SINE/Alu	1	294	(18)	1360713
582	21.2	13.6	0.0	chr15	81195991	81196136	(20795053)	C	MER5A	DNA/hAT-Charlie	(4)	185	17	1360888
272	33.6	6.8	0.7	chr15	81385834	81385971	(20605218)	C	MIR3	SINE/MIR	(4)	204	58	1361200
1896	24.5	3.6	7.0	chr15	81394618	81395340	(20595849)	+	MER77B	LTR/ERVL	11	743	(188)	1361210
407	35.5	6.0	2.4	chr15	81838323	81838815	(20152374)	+	L1M6	LINE/L1	4341	4863	(1537)	1361880
1073	19.2	17.4	11.3	chr15	81838816	81839178	(20152011)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	1361885
285	22.1	4.2	7.4	chr15	81949533	81949632	(20041557)	+	MIR3	SINE/MIR	87	182	(26)	1362082
2126	9.6	2.8	0.4	chr15	82921016	82921295	(19069894)	+	AluSx	SINE/Alu	4	290	(22)	1363680
477	32.4	2.8	9.4	chr15	82921663	82922003	(19069186)	C	HAL1ME	LINE/L1	(2139)	326	9	1363677
2166	13.6	0.0	0.3	chr15	84624074	84624381	(17366808)	+	AluSx1	SINE/Alu	6	312	(0)	1366292
305	25.2	20.1	0.8	chr15	84841405	84841528	(17149661)	+	MIRb	SINE/MIR	35	188	(80)	1366740
4482	24.6	7.2	2.5	chr15	87574553	87576459	(14414730)	+	L1ME1	LINE/L1	4152	6160	(19)	1370990
21	20.3	3.7	1.8	chr15	88375580	88375633	(13615556)	+	(TC)n	Simple_repeat	1	56	(0)	1372278
64	22.9	1.8	1.7	chr15	88375813	88375983	(13615206)	+	(CTTC)n	Simple_repeat	1	174	(0)	1372279
34	3.0	0.0	0.0	chr15	88716917	88716950	(13274239)	+	(CT)n	Simple_repeat	1	34	(0)	1372888
2789	13.6	3.8	1.4	chr15	88996858	88997370	(12993819)	+	MER4E	LTR/ERV1	73	766	(0)	1373414
3098	11.8	3.4	0.6	chr15	88997375	88997861	(12993328)	+	MER39B	LTR/ERV1	1	501	(152)	1373417
4193	9.4	1.3	4.9	chr15	89067063	89067690	(12923499)	C	LTR14B	LTR/ERVK	(0)	608	4	1373573
249	23.2	4.7	5.8	chr15	89088986	89089072	(12902117)	+	L3	LINE/CR1	3819	3904	(195)	1373631
15	10.7	0.0	5.9	chr15	89359170	89359203	(12631986)	+	(CCTC)n	Simple_repeat	1	34	(0)	1374096
21	16.6	0.0	0.0	chr15	89417149	89417189	(12574000)	+	(GTAT)n	Simple_repeat	1	41	(0)	1374165
255	25.8	2.5	1.4	chr15	89417561	89417649	(12573540)	+	MIRc	SINE/MIR	30	123	(145)	1374166
620	25.0	9.2	3.7	chr15	90184398	90184613	(11806576)	C	MIRb	SINE/MIR	(0)	268	40	1375845
12	14.3	3.0	2.9	chr15	90184785	90184817	(11806372)	+	G-rich	Low_complexity	1	34	(0)	1375846
13	11.3	7.5	2.3	chr15	90184818	90184823	(11806366)	+	(TGGCCGG)n	Simple_repeat	2	43	(0)	1375847
20	14.5	0.0	0.0	chr15	90184875	90184912	(11806277)	+	(GGGCG)n	Simple_repeat	1	38	(0)	1375848
5149	13.6	5.8	3.3	chr15	90450364	90451224	(11539965)	C	L1MA4	LINE/L1	(523)	5777	4896	1376389
1836	18.7	7.7	14.2	chr15	90451225	90451716	(11539473)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	1376391
3281	14.9	0.7	5.0	chr15	90451717	90451832	(11539357)	C	L1MA4	LINE/L1	(1248)	4895	4787	1376389
273	31.9	2.1	1.1	chr15	90646773	90646867	(11344322)	+	L2c	LINE/L2	3273	3368	(19)	1376774
2096	22.2	13.6	3.3	chr15	90735913	90736254	(11254935)	+	L1MC4a	LINE/L1	5284	5656	(2226)	1376987
1883	15.5	2.6	0.7	chr15	90736255	90736558	(11254631)	C	AluJr	SINE/Alu	(2)	310	1	1376993
10804	7.7	6.7	1.3	chr15	90825338	90826830	(11164359)	+	LTR12C	LTR/ERV1	2	1579	(0)	1377181
2533	4.8	0.0	4.8	chr15	91784172	91784497	(10206692)	C	AluY	SINE/Alu	(0)	311	1	1378857
277	26.0	7.4	13.8	chr15	91784498	91784569	(10206620)	C	MIRb	SINE/MIR	(114)	154	87	1378856
192	31.9	0.0	0.0	chr15	91784537	91784583	(10206606)	C	MIR3	SINE/MIR	(77)	131	85	1378858
225	31.2	7.0	4.6	chr15	93030243	93030437	(8960752)	C	L2a	LINE/L2	(27)	3399	3200	1380902
226	35.0	6.8	0.0	chr15	93030513	93030635	(8960554)	+	MIRb	SINE/MIR	1	132	(136)	1380903
201	37.1	6.1	0.8	chr15	93830983	93831107	(8160082)	C	L2a	LINE/L2	(5)	3421	3290	1382197
2029	13.8	2.1	5.3	chr15	96477178	96477574	(5513615)	C	L1MA9	LINE/L1	(532)	5780	5397	1385935
18	17.3	0.0	0.0	chr15	96901033	96901071	(5090118)	+	(TGAGGA)n	Simple_repeat	1	39	(0)	1386509
343	38.5	1.9	0.0	chr15	96901096	96901251	(5089938)	C	MIR	SINE/MIR	(101)	161	3	1386510
230	33.8	0.0	0.0	chr15	96901528	96901595	(5089594)	+	L4_C_Mam	LINE/RTE-X	4870	4937	(201)	1386511
1159	30.3	8.5	2.8	chr15	98354860	98355745	(3635444)	+	HAL1	LINE/L1	844	1784	(723)	1388502
605	29.7	7.7	0.0	chr15	98355761	98356023	(3635166)	+	L2a	LINE/L2	2761	3045	(374)	1388506
1710	18.2	6.2	3.5	chr15	98446363	98446418	(3544771)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	341	1388655
1158	33.2	7.2	6.7	chr15	99095687	99096797	(2894392)	+	HERV16-int	LTR/ERVL	257	1395	(3601)	1389615
32	3.2	0.0	0.0	chr15	99199448	99199479	(2791710)	+	(GT)n	Simple_repeat	1	32	(0)	1389765
329	13.0	0.0	0.0	chr15	99199480	99199525	(2791664)	+	MLT2C2	LTR/ERVL	518	563	(0)	1389763
27	17.8	3.3	5.3	chr15	99251399	99251489	(2739700)	+	(CCGCC)n	Simple_repeat	1	94	(0)	1389847
3612	10.7	3.0	0.2	chr15	99275849	99276362	(2714827)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1389893
2008	12.9	9.4	4.2	chr15	99725153	99725560	(2265629)	+	LTR14B	LTR/ERVK	7	608	(0)	1390506
577	25.5	6.7	6.2	chr15	100380955	100381116	(1610073)	+	LTR50	LTR/ERVL	1	166	(629)	1391381
2202	7.6	0.3	17.9	chr15	100381117	100381534	(1609655)	+	LTR14A	LTR/ERVK	1	344	(0)	1391382
577	28.2	8.9	5.9	chr15	100381535	100381622	(1609567)	+	LTR50	LTR/ERVL	162	268	(263)	1391381
10072	12.8	8.2	0.6	chr15	100424280	100425785	(1565404)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	1391435
281	27.7	11.4	2.0	chr15	101235944	101236094	(755095)	C	L2a	LINE/L2	(5)	3421	3255	1392512
1907	15.2	4.4	10.1	chr15	101236236	101236539	(754650)	+	THE1B	LTR/ERVL-MaLR	1	300	(64)	1392513
2360	7.9	0.0	1.3	chr15	101236540	101236844	(754345)	+	AluYm1	SINE/Alu	1	301	(10)	1392514
967	19.8	10.7	9.2	chr15	101567523	101567914	(423275)	C	MER54B	LTR/ERVL	(450)	451	59	1392954
24	9.9	8.1	6.2	chr15	101766319	101766392	(224797)	+	(CT)n	Simple_repeat	1	80	(0)	1393237
1979	16.3	10.6	0.3	chr15	101857159	101857540	(133649)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1393369
3841	13.7	2.4	0.7	chr16	10059	11142	(90327203)	C	TAR1	Satellite/telo	(43)	1103	1	1394056
2236	9.5	4.5	0.0	chr16	387487	387780	(89950565)	+	AluSx3	SINE/Alu	1	308	(3)	1394662
6184	14.3	3.4	0.6	chr16	387824	388797	(89949548)	C	LTR5B	LTR/ERVK	(0)	1002	1	1394663
17	24.5	0.0	7.7	chr16	914760	914837	(89423508)	+	(TCCC)n	Simple_repeat	1	78	(0)	1395327
1850	19.0	6.1	5.9	chr16	1056155	1056612	(89281733)	C	LTR1E	LTR/ERV1	(0)	804	346	1395450
14	20.7	2.6	0.0	chr16	1056626	1056664	(89281681)	+	G-rich	Low_complexity	1	40	(0)	1395451
248	11.9	0.0	0.0	chr16	1056666	1056724	(89281621)	C	LTR1D1	LTR/ERV1	(501)	398	340	1395452
20	26.3	3.3	3.2	chr16	1056738	1056828	(89281517)	+	G-rich	Low_complexity	1	94	(0)	1395453
1800	20.3	1.7	2.0	chr16	1056831	1057237	(89281108)	C	LTR1E	LTR/ERV1	(398)	406	1	1395454
16	14.4	0.0	0.0	chr16	1106608	1106638	(89231707)	+	(CCCCTC)n	Simple_repeat	1	31	(0)	1395501
1748	26.3	4.8	2.6	chr16	1483708	1484259	(88854086)	+	L1MB7	LINE/L1	5600	6169	(15)	1395984
2033	13.6	0.0	2.3	chr16	1484260	1484569	(88853776)	C	AluJb	SINE/Alu	(9)	303	1	1395987
1859	11.2	0.4	1.5	chr16	1723006	1723307	(88615038)	C	AluSx	SINE/Alu	(0)	312	28	1396317
399	2.3	0.0	0.0	chr16	1723308	1723351	(88614994)	+	AluSx3	SINE/Alu	183	226	(85)	1396318
409	9.3	0.0	1.9	chr16	1723350	1723403	(88614942)	C	AluSx3	SINE/Alu	(184)	127	75	1396319
1023	17.2	0.0	1.1	chr16	1723443	1723618	(88614727)	+	AluJb	SINE/Alu	108	281	(31)	1396311
30	0.0	0.0	0.0	chr16	1723620	1723648	(88614697)	+	(AAAAC)n	Simple_repeat	1	29	(0)	1396320
236	31.8	0.0	0.0	chr16	1723697	1723762	(88614583)	+	MIRb	SINE/MIR	125	190	(78)	1396321
12	24.1	0.0	2.4	chr16	2234786	2234826	(88103519)	+	G-rich	Low_complexity	1	41	(0)	1397082
1677	24.3	11.7	5.6	chr16	2372249	2372584	(87965761)	+	Tigger13a	DNA/TcMar-Tigger	12	377	(394)	1397306
298	23.1	3.0	0.0	chr16	2423446	2423510	(87914835)	+	MIR	SINE/MIR	175	241	(21)	1397424
1603	11.7	12.4	0.0	chr16	2999480	2999751	(87338594)	C	AluSz6	SINE/Alu	(0)	312	1	1398314
33	0.0	0.0	0.0	chr16	3065512	3065542	(87272803)	+	(TCTGTC)n	Simple_repeat	1	31	(0)	1398436
2117	12.4	0.7	0.7	chr16	3961166	3961471	(86376874)	+	AluJb	SINE/Alu	1	306	(6)	1400165
2291	12.0	0.0	0.0	chr16	3961744	3962052	(86376293)	+	AluSz6	SINE/Alu	1	309	(3)	1400166
21	6.7	0.0	2.9	chr16	4293973	4294006	(86044339)	+	(CAG)n	Simple_repeat	1	34	(0)	1400871
208	31.8	10.6	0.0	chr16	4344861	4344970	(85993375)	C	L2c	LINE/L2	(244)	3143	3021	1400976
838	18.0	13.1	3.6	chr16	4537089	4537336	(85801009)	+	L1ME2z	LINE/L1	6159	6433	(11)	1401336
249	35.4	2.2	1.7	chr16	4537600	4537777	(85800568)	C	MER5A	DNA/hAT-Charlie	(4)	185	7	1401337
308	15.4	9.3	2.5	chr16	4616820	4616899	(85721446)	+	FRAM	SINE/Alu	5	91	(42)	1401533
27	0.0	0.0	5.7	chr16	4992232	4992266	(85346079)	+	(TTTCT)n	Simple_repeat	1	35	(0)	1402327
287	31.4	10.6	2.5	chr16	7906235	7906355	(82431990)	+	L2b	LINE/L2	3082	3213	(174)	1407936
189	30.8	0.0	3.0	chr16	8905980	8906046	(81432299)	+	MIRb	SINE/MIR	134	198	(70)	1410082
362	28.7	6.8	2.6	chr16	10976432	10976585	(79361760)	+	L1ME4a	LINE/L1	5960	6120	(4)	1414690
212	22.0	4.8	1.7	chr16	12120324	12120383	(78217962)	+	AmnSINE1	SINE/5S-Deu-L2	508	569	(6)	1417290
343	35.7	5.5	0.0	chr16	12758212	12758382	(77579963)	C	MIRb	SINE/MIR	(63)	205	25	1418556
181	25.6	4.3	15.9	chr16	12758381	12758487	(77579858)	C	L2c	LINE/L2	(24)	3363	3270	1418557
2059	12.4	0.7	0.3	chr16	13985169	13985459	(76352886)	+	AluSz	SINE/Alu	1	292	(20)	1421245
1740	17.5	1.3	0.3	chr16	14294057	14294359	(76043986)	+	AluJb	SINE/Alu	1	306	(6)	1421792
1999	11.7	0.0	0.0	chr16	14294539	14294820	(76043525)	+	AluSx	SINE/Alu	1	282	(30)	1421793
229	27.4	9.3	0.0	chr16	15428273	15428418	(74909927)	C	L1ME4a	LINE/L1	(5)	6119	5959	1424379
1020	14.8	2.8	0.6	chr16	18219448	18219624	(72118721)	+	MSTB1	LTR/ERVL-MaLR	2	182	(244)	1430764
15	5.6	0.0	0.0	chr16	18219625	18219643	(72118702)	+	(GT)n	Simple_repeat	1	19	(0)	1430765
1169	12.4	0.0	0.0	chr16	18219644	18219796	(72118549)	C	AluSx1	SINE/Alu	(26)	286	134	1430766
1662	24.0	2.9	2.9	chr16	19163743	19164218	(71174127)	C	Charlie4a	DNA/hAT-Charlie	(0)	508	33	1432863
311	30.9	3.8	7.4	chr16	19164241	19164429	(71173916)	+	L2c	LINE/L2	3110	3291	(96)	1432862
1860	13.0	9.7	4.8	chr16	20641357	20641770	(69696575)	+	LTR14B	LTR/ERVK	1	608	(0)	1436246
6078	9.8	0.0	0.2	chr16	20641771	20642589	(69695756)	+	HERVK14-int	LTR/ERVK	1	817	(5279)	1436246
1875	12.9	9.4	4.3	chr16	20647740	20648152	(69690193)	+	LTR14B	LTR/ERVK	1	608	(0)	1436254
1242	15.5	7.2	1.2	chr16	20648153	20648399	(69689946)	+	LTR49	LTR/ERV1	183	520	(383)	1436253
2923	12.7	5.0	7.2	chr16	20716266	20716874	(69621471)	+	LTR14B	LTR/ERVK	14	608	(0)	1436360
1025	27.2	14.3	4.2	chr16	20716929	20717472	(69620873)	C	MLT1L	LTR/ERVL-MaLR	(2)	608	1	1436361
15	23.1	1.9	3.6	chr16	21599621	21599674	(68738671)	+	(GGC)n	Simple_repeat	1	55	(0)	1438246
2697	25.4	10.1	8.9	chr16	23127778	23128919	(67209426)	+	L1MC5a	LINE/L1	947	1960	(817)	1441476
388	36.5	4.8	5.8	chr16	23138591	23139055	(67199290)	+	L2b	LINE/L2	2916	3375	(0)	1441499
330	21.3	13.9	11.0	chr16	23596815	23596927	(66741418)	+	HAL1b	LINE/L1	1747	1843	(578)	1442649
2690	13.0	16.3	3.9	chr16	23596928	23597462	(66740883)	C	LTR18B	LTR/ERVL	(0)	614	1	1442650
2252	9.6	1.0	0.0	chr16	23677898	23678190	(66660155)	+	AluSz	SINE/Alu	1	296	(16)	1442841
239	27.4	14.7	3.8	chr16	23678191	23678252	(66660093)	C	MER102b	DNA/hAT-Charlie	(271)	70	9	1442840
591	22.6	0.0	4.6	chr16	23678377	23678529	(66659816)	C	MER5A1	DNA/hAT-Charlie	(2)	164	19	1442842
2511	10.7	0.6	2.5	chr16	23788117	23788331	(66550014)	C	MER41E	LTR/ERV1	(387)	208	1	1443130
221	21.6	0.0	1.9	chr16	23788506	23788557	(66549788)	+	MIR	SINE/MIR	207	257	(5)	1443132
255	22.7	0.0	2.9	chr16	23788607	23788674	(66549671)	+	MER5A1	DNA/hAT-Charlie	101	166	(0)	1443133
989	28.2	9.0	9.6	chr16	23788796	23789356	(66548989)	+	MLT1L	LTR/ERVL-MaLR	38	594	(16)	1443134
592	24.5	9.2	3.2	chr16	23853187	23853549	(66484796)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	20	1443289
626	29.5	7.5	2.5	chr16	24510387	24510626	(65827719)	C	MLT1K	LTR/ERVL-MaLR	(340)	255	3	1444879
435	26.2	11.1	0.6	chr16	25341265	25341433	(64996912)	C	L2b	LINE/L2	(683)	2736	2548	1446796
255	20.0	3.5	0.0	chr16	25341451	25341505	(64996840)	C	MER5A	DNA/hAT-Charlie	(0)	189	133	1446801
442	22.3	0.8	12.8	chr16	25341557	25341705	(64996640)	C	L1MDa	LINE/L1	(5007)	1626	1496	1446802
1459	20.4	12.0	4.7	chr16	25341707	25342113	(64996232)	C	L1MDa	LINE/L1	(6173)	460	20	1446802
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
1035	26.0	6.4	0.3	chr16	26643594	26643886	(63694459)	C	LTR16C	LTR/ERVL	(0)	489	178	1449391
12	17.9	0.0	5.6	chr16	26644084	26644119	(63694226)	+	(CTCC)n	Simple_repeat	1	36	(0)	1449392
319	32.6	11.7	0.8	chr16	27154774	27155033	(63183312)	+	LTR86A2	LTR/ERVL	175	466	(42)	1450486
16	25.8	0.0	0.0	chr16	27155035	27155072	(63183273)	+	(TG)n	Simple_repeat	1	38	(0)	1450487
580	13.3	0.0	3.1	chr16	27155305	27155402	(63182943)	+	AluJr4	SINE/Alu	49	143	(169)	1450488
17	22.1	1.4	6.8	chr16	28495535	28495606	(61842739)	+	GA-rich	Low_complexity	1	73	(0)	1453680
215	27.7	15.1	1.0	chr16	29791036	29791137	(60547208)	+	MIR1_Amn	SINE/MIR	39	157	(73)	1456580
12	25.5	3.8	1.8	chr16	29926074	29926126	(60412219)	+	(GCGCCCT)n	Simple_repeat	1	55	(0)	1456879
11	24.4	0.0	0.0	chr16	29974030	29974063	(60364282)	+	G-rich	Low_complexity	1	34	(0)	1457008
26	0.0	0.0	0.0	chr16	30076007	30076031	(60262314)	+	(GCG)n	Simple_repeat	1	25	(0)	1457216
2706	15.8	0.9	4.8	chr16	30153900	30153987	(60184358)	+	L1MB1	LINE/L1	5777	5865	(303)	1457389
2449	15.4	1.2	1.6	chr16	30153988	30154415	(60183930)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1457404
1775	16.1	0.3	4.4	chr16	30377235	30377404	(59960941)	+	AluJr	SINE/Alu	139	304	(8)	1457877
14	21.2	4.5	0.0	chr16	30377710	30377753	(59960592)	+	G-rich	Low_complexity	1	46	(0)	1457879
237	33.8	10.5	8.2	chr16	30522252	30522641	(59815704)	+	L2b	LINE/L2	2974	3373	(2)	1458278
12089	16.4	1.7	2.9	chr16	30544918	30546615	(59791730)	C	HERVFH21-int	LTR/ERV1	(4215)	2314	656	1458305
19	0.0	0.0	0.0	chr16	30698719	30698742	(59639603)	+	(GAGC)n	Simple_repeat	1	24	(0)	1458688
380	23.9	7.4	6.1	chr16	30813968	30814115	(59524230)	C	MIR3	SINE/MIR	(23)	185	33	1458924
13	22.6	0.0	0.0	chr16	30896871	30896906	(59441439)	+	G-rich	Low_complexity	1	36	(0)	1459128
2280	9.2	0.0	0.0	chr16	30913976	30914282	(59424063)	C	AluSz	SINE/Alu	(0)	312	1	1459179
450	22.1	4.4	4.4	chr16	30914478	30914511	(59423834)	+	MIRb	SINE/MIR	38	72	(196)	1459180
344	30.3	12.0	2.2	chr16	31495764	31495898	(58842447)	+	MIR	SINE/MIR	107	256	(6)	1460428
2917	11.9	7.9	10.3	chr16	31659961	31660570	(58677775)	+	LTR14B	LTR/ERVK	15	608	(0)	1460671
38731	15.2	1.2	0.7	chr16	31660571	31667607	(58670738)	+	HERVK14-int	LTR/ERVK	1	7359	(75)	1460671
3207	12.1	6.2	10.1	chr16	31667777	31668393	(58669952)	+	LTR14B	LTR/ERVK	17	608	(0)	1460673
16473	15.6	3.6	1.0	chr16	31668397	31671576	(58666769)	C	L1P4e	LINE/L1	(910)	5763	2498	1460674
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
377	20.6	0.0	0.0	chr16	34063794	34063861	(56274484)	+	AluYj4	SINE/Alu	224	291	(20)	1463563
318	21.8	0.0	0.0	chr16	34066270	34066324	(56272021)	+	AluYj4	SINE/Alu	224	278	(33)	1463572
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
338	14.9	0.0	0.0	chr16	34085515	34085561	(56252784)	C	AluYj4	SINE/Alu	(39)	272	226	1463590
49	10.2	1.2	0.0	chr16	34085562	34085645	(56252700)	+	(CCATT)n	Simple_repeat	1	85	(0)	1463591
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
237	28.0	14.5	2.5	chr16	46686973	46687093	(43651252)	+	MIRb	SINE/MIR	131	268	(0)	1465818
14	8.2	3.9	0.0	chr16	46831050	46831075	(43507270)	+	(CCGC)n	Simple_repeat	1	27	(0)	1466114
20	15.9	0.0	0.0	chr16	46831259	46831293	(43507052)	+	(GC)n	Simple_repeat	1	35	(0)	1466115
2833	21.1	9.4	2.7	chr16	47747599	47748512	(42589833)	C	L1MEc	LINE/L1	(5365)	1035	55	1467587
325	31.0	7.0	7.3	chr16	48092569	48092934	(42245411)	C	L2a	LINE/L2	(2)	3424	3010	1468115
233	31.7	16.3	4.8	chr16	48092979	48093020	(42245325)	+	L2a	LINE/L2	2830	2866	(553)	1468116
942	19.2	6.5	1.0	chr16	48093021	48093225	(42245120)	+	MER20	DNA/hAT-Charlie	1	217	(2)	1468117
1951	11.2	3.9	0.0	chr16	48164450	48164718	(42173627)	+	AluSq	SINE/Alu	1	280	(33)	1468238
32	0.0	0.0	0.0	chr16	48164720	48164749	(42173596)	+	(TCCC)n	Simple_repeat	1	30	(0)	1468239
17	5.0	0.0	0.0	chr16	48164767	48164787	(42173558)	+	(AT)n	Simple_repeat	1	21	(0)	1468240
456	24.7	6.9	5.9	chr16	48448584	48448785	(41889560)	C	Charlie18a	DNA/hAT-Charlie	(11)	331	128	1468818
1637	19.8	0.3	0.7	chr16	48449254	48449546	(41888799)	+	AluJo	SINE/Alu	11	302	(10)	1468819
223	26.0	0.0	6.1	chr16	49272701	49272782	(41065563)	C	L2c	LINE/L2	(60)	3327	3251	1470261
405	26.2	4.7	2.4	chr16	49272950	49273074	(41065271)	C	L2a	LINE/L2	(0)	3426	3299	1470262
476	24.8	4.2	0.0	chr16	49552215	49552346	(40785999)	+	MIR3	SINE/MIR	37	175	(55)	1470716
240	19.8	13.5	2.0	chr16	49953415	49953512	(40384833)	C	MER113	DNA/hAT-Charlie	(134)	387	277	1471454
1935	14.8	0.3	7.0	chr16	50658968	50659298	(39679047)	+	AluJr	SINE/Alu	1	309	(3)	1472935
279	34.0	8.1	0.6	chr16	50659309	50659637	(39678708)	C	L2	LINE/L2	(475)	2944	2589	1472936
1465	23.1	7.3	8.5	chr16	50659916	50660112	(39678233)	+	MLT1C	LTR/ERVL-MaLR	1	186	(281)	1472937
530	18.2	0.0	1.0	chr16	50733242	50733341	(39605004)	+	AluSx	SINE/Alu	213	311	(1)	1473080
1836	20.3	7.8	1.9	chr16	51640030	51640460	(38697885)	C	MLT1C	LTR/ERVL-MaLR	(8)	459	1	1474715
342	28.9	11.8	0.7	chr16	51640546	51640695	(38697650)	+	LTR33	LTR/ERVL	243	411	(104)	1474717
440	25.2	0.0	10.3	chr16	51640807	51640918	(38697427)	C	MER5A1	DNA/hAT-Charlie	(7)	159	55	1474718
2555	10.5	0.8	0.6	chr16	51640919	51641272	(38697073)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1474719
659	28.1	28.6	4.5	chr16	53095583	53095991	(37242354)	C	L1ME3F	LINE/L1	(327)	5916	5415	1477218
885	19.6	2.4	2.4	chr16	53096057	53096224	(37242121)	C	AluJb	SINE/Alu	(11)	301	134	1477220
182	24.3	0.0	0.0	chr16	53096288	53096324	(37242021)	+	L2c	LINE/L2	3313	3349	(38)	1477221
294	5.6	0.0	0.0	chr16	53096368	53096403	(37241942)	C	MADE1	DNA/TcMar-Mariner	(0)	80	45	1477222
1964	16.6	0.7	0.0	chr16	53475214	53475514	(36862831)	C	AluSz6	SINE/Alu	(8)	304	2	1477914
10714	16.4	7.2	8.3	chr16	53475515	53475835	(36862510)	C	L1MB5	LINE/L1	(2860)	4146	3884	1477910
413	29.2	2.3	5.1	chr16	54349648	54349784	(35988561)	+	MIRc	SINE/MIR	14	146	(122)	1479372
2374	15.4	7.0	0.5	chr16	54349816	54350213	(35988132)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1479373
2144	11.0	1.0	3.2	chr16	54523573	54523881	(35814464)	+	AluSx3	SINE/Alu	2	303	(8)	1479684
514	34.2	5.7	3.1	chr16	56729488	56729879	(33608466)	+	L2b	LINE/L2	2952	3354	(21)	1483651
15	3.8	0.0	9.1	chr16	56730007	56730039	(33608306)	+	(GCCCC)n	Simple_repeat	1	33	(0)	1483652
195	29.5	12.8	0.0	chr16	57530531	57530625	(32807720)	+	L2c	LINE/L2	1419	1527	(1892)	1485257
2207	13.2	0.6	0.3	chr16	58487239	58487549	(31850796)	+	AluSz	SINE/Alu	1	312	(0)	1487217
385	37.0	2.6	0.5	chr16	66368612	66368796	(23969549)	C	MIRb	SINE/MIR	(59)	209	21	1499593
183	25.4	2.9	4.3	chr16	66369027	66369096	(23969249)	+	MIR1_Amn	SINE/MIR	85	153	(77)	1499594
185	29.7	5.9	8.3	chr16	66369064	66369184	(23969161)	C	L3	LINE/CR1	(2301)	1798	1681	1499595
235	15.8	0.0	0.0	chr16	66369372	66369409	(23968936)	C	L2b	LINE/L2	(17)	3358	3321	1499596
623	21.4	12.5	0.0	chr16	66369376	66369543	(23968802)	C	MIRb	SINE/MIR	(17)	251	60	1499597
216	22.9	9.8	1.2	chr16	67108993	67109076	(23229269)	+	MIRb	SINE/MIR	96	187	(81)	1501115
1918	12.7	0.0	0.4	chr16	68175567	68175833	(22162512)	C	AluSz6	SINE/Alu	(19)	293	28	1503087
479	22.8	18.4	7.8	chr16	68175865	68175983	(22162362)	C	L1ME3E	LINE/L1	(71)	6171	6019	1503088
2239	10.0	0.3	0.0	chr16	68175984	68176274	(22162071)	C	AluSg4	SINE/Alu	(17)	293	2	1503089
2293	8.9	2.7	0.0	chr16	70707795	70708086	(19630259)	C	AluSx1	SINE/Alu	(9)	303	4	1508521
2170	14.2	0.3	0.0	chr16	72914710	72915020	(17423325)	+	AluSz	SINE/Alu	1	312	(0)	1512144
20	6.5	0.0	2.9	chr16	73096162	73096195	(17242150)	+	(CTGC)n	Simple_repeat	1	34	(0)	1512405
15719	14.4	3.1	4.0	chr16	75435212	75436389	(14901956)	+	Tigger17	DNA/TcMar-Tigger	1200	2379	(294)	1516787
808	10.9	0.0	0.0	chr16	77375205	77375305	(12963040)	C	AluSx	SINE/Alu	(195)	117	17	1519723
436	12.9	0.0	0.0	chr16	77375332	77375393	(12962952)	+	AluYk2	SINE/Alu	232	293	(18)	1519724
205	28.7	4.7	8.2	chr16	78708786	78708895	(11629450)	+	L2b	LINE/L2	3264	3369	(6)	1522239
2053	10.6	0.0	0.0	chr16	79220010	79220274	(11118071)	+	AluSx1	SINE/Alu	37	301	(11)	1523146
201	31.4	2.8	0.0	chr16	80072040	80072109	(10266236)	C	MIRb	SINE/MIR	(190)	78	7	1524687
323	34.0	3.6	6.2	chr16	82085432	82085544	(8252801)	C	MIRb	SINE/MIR	(152)	110	1	1528609
1090	25.1	13.5	0.6	chr16	84538423	84538938	(5799407)	+	L1ME3A	LINE/L1	5585	6169	(4)	1533015
1943	11.5	3.4	0.3	chr16	85024995	85025280	(5313065)	+	AluSz	SINE/Alu	1	295	(17)	1534045
1295	26.9	8.7	6.1	chr16	85025281	85025429	(5312916)	+	MLT1K	LTR/ERVL-MaLR	372	534	(61)	1534044
2124	7.5	0.0	0.4	chr16	85025430	85025707	(5312638)	C	AluSc	SINE/Alu	(32)	277	1	1534046
915	12.7	0.0	0.8	chr16	85115299	85115424	(5222921)	+	AluSz	SINE/Alu	1	125	(187)	1534204
723	31.4	6.4	3.8	chr16	85227795	85228329	(5110016)	C	L2b	LINE/L2	(0)	3375	2830	1534438
262	29.5	6.4	1.1	chr16	85269043	85269131	(5069214)	C	MIRb	SINE/MIR	(86)	182	89	1534529
2195	11.9	0.0	0.3	chr16	86140584	86140867	(4197478)	C	AluSx	SINE/Alu	(28)	284	1	1536120
2157	18.4	2.8	3.5	chr16	86140868	86141063	(4197282)	C	MSTB	LTR/ERVL-MaLR	(238)	188	1	1536118
344	32.9	5.7	0.7	chr16	86141072	86141221	(4197124)	C	MIRb	SINE/MIR	(28)	240	83	1536121
389	29.6	7.2	1.9	chr16	87077232	87077441	(3260904)	C	MIR	SINE/MIR	(27)	235	14	1537750
272	24.6	4.5	2.3	chr16	87583668	87583796	(2754549)	C	LTR16C	LTR/ERVL	(0)	489	358	1538720
289	21.1	4.1	0.0	chr16	87583883	87583953	(2754392)	C	LTR16C	LTR/ERVL	(274)	215	142	1538720
20	0.0	0.0	0.0	chr16	88786114	88786135	(1552210)	+	(A)n	Simple_repeat	1	22	(0)	1540424
2093	8.1	1.0	6.2	chr16	88786141	88786287	(1552058)	+	AluSq2	SINE/Alu	4	136	(177)	1540425
17	9.7	2.9	2.8	chr16	89187990	89188024	(1150321)	+	G-rich	Low_complexity	1	36	(0)	1540885
328	5.7	1.2	3.4	chr17	113094	113583	(83143858)	+	(ACCCTA)n	Simple_repeat	1	496	(0)	1544650
950	19.3	0.6	0.0	chr17	166479	166644	(83090797)	+	THE1B	LTR/ERVL-MaLR	1	167	(197)	1544722
239	23.5	1.4	4.2	chr17	1550856	1550926	(81706515)	C	L2b	LINE/L2	(649)	2770	2702	1547347
2111	12.7	0.0	3.1	chr17	1551274	1551595	(81705846)	C	AluJr	SINE/Alu	(0)	312	1	1547349
644	33.3	14.0	3.8	chr17	1830274	1830765	(81426676)	+	L2a	LINE/L2	1721	2290	(1129)	1547919
2395	10.2	0.0	0.0	chr17	2014550	2014852	(81242589)	+	AluSx	SINE/Alu	1	303	(9)	1548304
402	34.2	8.1	3.7	chr17	2014853	2014946	(81242495)	C	L2c	LINE/L2	(372)	3015	2920	1548303
15	29.9	4.1	0.0	chr17	2399596	2399668	(80857773)	+	(GGCCCG)n	Simple_repeat	1	76	(0)	1549021
209	31.2	6.0	4.6	chr17	3479276	3479406	(79778035)	C	L2c	LINE/L2	(868)	2551	2419	1551090
422	26.7	6.7	4.3	chr17	3479407	3479594	(79777847)	C	MLT1J	LTR/ERVL-MaLR	(13)	499	307	1551094
13	18.9	0.0	0.0	chr17	3755133	3755162	(79502279)	+	(CGC)n	Simple_repeat	1	30	(0)	1551644
476	25.7	13.4	0.4	chr17	3935302	3935528	(79321913)	+	MLT1K	LTR/ERVL-MaLR	1	261	(334)	1552034
2431	7.2	0.0	0.0	chr17	3935536	3935826	(79321615)	C	AluSx1	SINE/Alu	(10)	302	12	1552035
1765	19.7	2.4	21.6	chr17	3993897	3994465	(79262976)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	1552160
6878	19.1	3.0	6.7	chr17	3994466	3995297	(79262144)	C	L1M4b	LINE/L1	(1656)	5344	4653	1552159
1017	28.1	6.8	10.3	chr17	4561162	4561528	(78695913)	+	L1ME3A	LINE/L1	5696	6048	(125)	1553302
200	26.1	11.9	0.0	chr17	4719940	4720058	(78537383)	C	L2a	LINE/L2	(457)	2962	2828	1553601
12	12.8	8.8	0.0	chr17	4948398	4948431	(78309010)	+	(GCT)n	Simple_repeat	1	37	(0)	1554112
189	21.1	7.3	0.0	chr17	5541525	5541562	(77715879)	C	MIR	SINE/MIR	(77)	185	145	1555350
331	30.8	15.2	4.8	chr17	7946109	7946360	(75311081)	C	MLT1M	LTR/ERVL-MaLR	(21)	651	369	1559786
2925	13.9	5.0	2.1	chr17	8338305	8338827	(74918614)	+	LTR45C	LTR/ERV1	1	539	(0)	1560596
1683	16.6	3.3	2.6	chr17	8338828	8339032	(74918409)	C	MSTB1	LTR/ERVL-MaLR	(228)	204	3	1560595
3301	11.4	5.2	9.5	chr17	11659302	11659922	(71597519)	+	LTR14B	LTR/ERVK	16	608	(0)	1566833
2981	26.0	5.2	5.6	chr17	11659928	11660315	(71597126)	C	L1ME2	LINE/L1	(2818)	3328	2926	1566832
1404	30.8	7.9	3.4	chr17	13026750	13027548	(70229893)	C	L2c	LINE/L2	(528)	2891	2054	1569061
1582	19.1	6.7	2.0	chr17	13922774	13923115	(69334326)	+	MER52-int	LTR/ERV1	214	572	(2516)	1570598
25119	16.6	2.6	2.6	chr17	13923154	13924130	(69333311)	+	MER52-int	LTR/ERV1	540	1562	(5529)	1570598
941	28.7	12.0	0.5	chr17	14218395	14218776	(69038665)	C	L1MC5a	LINE/L1	(1081)	1696	1265	1571065
12	12.6	0.0	3.6	chr17	15737792	15737819	(67519622)	+	(ATGGC)n	Simple_repeat	1	28	(0)	1573585
408	25.4	8.2	9.2	chr17	15746624	15746786	(67510655)	C	MLT1F-int	LTR/ERVL-MaLR	(91)	1398	1251	1573591
2870	11.6	6.8	11.5	chr17	15746799	15747423	(67510018)	C	LTR14B	LTR/ERVK	(0)	608	16	1573592
363	31.6	10.5	0.6	chr17	15894594	15894765	(67362676)	C	L2	LINE/L2	(730)	2689	2499	1573846
2206	6.7	6.3	0.3	chr17	16315680	16315994	(66941447)	C	AluSx4	SINE/Alu	(0)	310	2	1574680
551	26.1	24.1	0.0	chr17	17281616	17281799	(65975642)	+	MIR	SINE/MIR	29	256	(6)	1576335
2250	11.9	0.0	0.7	chr17	17900250	17900551	(65356890)	+	AluSz	SINE/Alu	13	312	(0)	1577537
257	38.0	7.1	2.5	chr17	17922314	17922533	(65334908)	C	L2	LINE/L2	(481)	2938	2705	1577577
614	25.2	13.1	1.8	chr17	17922534	17922755	(65334686)	+	MIR	SINE/MIR	1	251	(11)	1577578
41	9.7	1.5	0.0	chr17	18039406	18039471	(65217970)	+	(GT)n	Simple_repeat	1	67	(0)	1577827
1832	16.0	1.0	2.7	chr17	18085984	18086277	(65171164)	+	AluJb	SINE/Alu	2	290	(22)	1577921
535	26.3	7.2	8.9	chr17	18086278	18086370	(65171071)	C	L1MC4	LINE/L1	(600)	7442	7350	1577911
1798	14.7	4.9	0.7	chr17	18086374	18086665	(65170776)	+	AluJb	SINE/Alu	1	305	(7)	1577922
443	7.3	0.0	0.0	chr17	18086684	18086738	(65170703)	C	AluJo	SINE/Alu	(18)	294	240	1577923
22	13.0	0.0	0.0	chr17	18677906	18677939	(64579502)	+	(A)n	Simple_repeat	1	34	(0)	1578924
2126	11.4	0.0	0.0	chr17	19303825	19304123	(63953318)	+	AluSg	SINE/Alu	3	301	(9)	1580387
10236	13.3	1.6	1.2	chr17	19442425	19444001	(63813440)	+	MSTA-int	LTR/ERVL-MaLR	47	1631	(0)	1580610
2255	12.2	11.9	2.6	chr17	19444002	19444315	(63813126)	+	MSTA	LTR/ERVL-MaLR	1	362	(66)	1580610
2401	10.2	0.3	0.0	chr17	19444316	19444619	(63812822)	C	AluSq2	SINE/Alu	(8)	305	1	1580612
1499	19.8	6.0	3.5	chr17	19492232	19492571	(63764870)	+	MSTD	LTR/ERVL-MaLR	1	349	(47)	1580709
12	18.8	2.6	2.6	chr17	19867221	19867258	(63390183)	+	(GCGGCTC)n	Simple_repeat	1	39	(0)	1581428
2358	7.7	2.0	8.4	chr17	20563122	20563488	(62693953)	C	LTR14A	LTR/ERVK	(1)	343	1	1582686
2332	10.8	0.0	0.0	chr17	20908013	20908299	(62349142)	+	AluSg	SINE/Alu	7	293	(17)	1583314
447	23.5	2.9	1.9	chr17	21545684	21545787	(61711654)	+	MSTB	LTR/ERVL-MaLR	98	202	(224)	1584430
279	27.2	1.1	3.2	chr17	21545793	21545887	(61711554)	+	L2c	LINE/L2	3295	3387	(0)	1584431
2387	30.5	5.1	4.4	chr17	21678460	21686980	(61570461)	C	SST1	Satellite/centr	(27)	8578	1	1584644
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26935986	26936392	(56321049)	+	(GAATG)n	Satellite	1	409	(0)	1585984
1545	18.6	0.5	0.9	chr17	26937237	26937936	(56319505)	+	(GAATG)n	Satellite	5	705	(0)	1585990
395	19.4	1.6	0.0	chr17	26937941	26938002	(56319439)	+	AluSc	SINE/Alu	223	285	(24)	1585991
1545	18.6	0.5	0.9	chr17	26938006	26938444	(56318997)	+	(GAATG)n	Satellite	3	440	(0)	1585992
1276	24.4	0.4	0.0	chr17	27274530	27274804	(55982637)	+	ERVL-E-int	LTR/ERVL	4957	5232	(435)	1586426
515	12.1	1.1	15.7	chr17	27274801	27274847	(55982594)	+	ERVL-B4-int	LTR/ERVL	4439	4479	(1188)	1586427
2094	12.4	0.3	4.3	chr17	27274848	27275170	(55982271)	C	AluSx1	SINE/Alu	(1)	311	2	1586428
2796	15.0	5.4	0.0	chr17	27702160	27702611	(55554830)	+	MER9a3	LTR/ERVK	33	510	(2)	1587251
1180	16.8	2.0	1.0	chr17	27702614	27702815	(55554626)	+	AluSq2	SINE/Alu	109	312	(1)	1587252
846	20.6	4.5	1.1	chr17	28221311	28221460	(55035981)	+	L2a	LINE/L2	3268	3420	(6)	1588298
1818	18.0	0.6	4.7	chr17	28266198	28266558	(54990883)	+	HERV-Fc1_LTR1	LTR/ERV1	1	346	(0)	1588360
2048	14.1	4.7	3.6	chr17	30803512	30803871	(52453570)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1593307
314	29.5	4.7	3.2	chr17	33946502	33946627	(49310814)	C	L2c	LINE/L2	(0)	3375	3248	1599612
1820	18.6	0.7	0.0	chr17	34303510	34303784	(48953657)	+	AluJb	SINE/Alu	1	277	(35)	1600173
3986	8.7	0.8	0.0	chr17	34303786	34304280	(48953161)	C	MER9B	LTR/ERVK	(0)	499	1	1600174
350	35.8	3.8	0.0	chr17	34565703	34565853	(48691588)	C	MIR3	SINE/MIR	(11)	197	41	1600657
16	0.0	0.0	0.0	chr17	34854017	34854037	(48403404)	+	(ATAA)n	Simple_repeat	1	21	(0)	1601207
201	30.0	3.8	5.4	chr17	35120054	35120243	(48137198)	C	L2b	LINE/L2	(27)	3399	3217	1601737
302	28.9	15.8	2.3	chr17	35929807	35930024	(47327417)	+	MIRb	SINE/MIR	2	265	(3)	1603091
210	26.4	0.0	8.6	chr17	35930388	35930445	(47326996)	C	OldhAT1	DNA/hAT-Ac	(131)	2717	2665	1603092
610	27.0	3.1	1.9	chr17	38847927	38848085	(44409356)	+	AluJr4	SINE/Alu	140	300	(12)	1608725
1857	15.0	2.4	0.0	chr17	38848245	38848530	(44408911)	C	AluSx	SINE/Alu	(17)	295	3	1608726
4351	12.1	1.4	4.1	chr17	39014173	39014879	(44242562)	+	LTR8	LTR/ERV1	1	688	(3)	1609127
838	9.1	11.2	1.4	chr17	39014880	39014984	(44242457)	+	MER21A	LTR/ERVL	42	161	(770)	1609126
13	22.7	2.3	2.3	chr17	39401721	39401763	(43855678)	+	(GGC)n	Simple_repeat	1	44	(0)	1610001
2416	9.4	0.0	0.0	chr17	39963572	39963870	(43293571)	+	AluSq2	SINE/Alu	1	299	(14)	1611088
542	29.9	11.5	2.8	chr17	39963950	39964266	(43293175)	C	L2c	LINE/L2	(0)	3387	3040	1611089
14	12.4	5.7	0.0	chr17	40072900	40072934	(43184507)	+	(CCCCAGT)n	Simple_repeat	1	37	(0)	1611302
374	27.8	3.8	1.9	chr17	40073322	40073448	(43183993)	+	MIR	SINE/MIR	24	147	(83)	1611303
2172	22.4	2.6	4.4	chr17	40531534	40532051	(42725390)	+	MLT1F2	LTR/ERVL-MaLR	53	560	(0)	1612252
156	23.5	2.0	2.4	chr17	41651910	41652352	(41605089)	+	(AC)n	Simple_repeat	1	452	(0)	1613961
1989	9.4	0.0	1.8	chr17	41687511	41687786	(41569655)	+	AluSx1	SINE/Alu	22	292	(20)	1614053
525	25.0	13.8	7.1	chr17	41687787	41688013	(41569428)	+	MER102a	DNA/hAT-Charlie	77	330	(0)	1614052
187	25.0	0.0	0.0	chr17	41801851	41801898	(41455543)	C	MIR3	SINE/MIR	(60)	148	101	1614330
248	8.3	7.7	2.0	chr17	41801951	41801999	(41455442)	C	L2b	LINE/L2	(0)	3375	3324	1614331
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
562	22.5	4.2	3.6	chr17	43391957	43392122	(39865319)	C	MER45C	DNA/hAT-Tip100	(85)	868	702	1617700
459	25.9	1.8	0.0	chr17	43392177	43392288	(39865153)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	1617701
15	29.9	0.0	0.0	chr17	44138450	44138488	(39118953)	+	(CA)n	Simple_repeat	1	39	(0)	1619307
976	18.9	0.0	0.0	chr17	44138608	44138782	(39118659)	C	MER3	DNA/hAT-Charlie	(34)	175	1	1619308
16	23.3	0.0	0.0	chr17	44308206	44308240	(38949201)	+	G-rich	Low_complexity	1	35	(0)	1619669
17	10.8	0.0	0.0	chr17	44308345	44308374	(38949067)	+	(CGAGG)n	Simple_repeat	1	30	(0)	1619670
12	13.9	9.8	3.6	chr17	44599684	44599734	(38657707)	+	GA-rich	Low_complexity	1	56	(0)	1620294
1948	17.8	1.3	0.0	chr17	45390921	45391224	(37866217)	+	AluJb	SINE/Alu	1	308	(4)	1621956
1222	20.3	2.7	11.2	chr17	45391225	45391282	(37866159)	+	L1MB7	LINE/L1	5819	5865	(319)	1621953
236	30.7	16.0	2.1	chr17	45391289	45391524	(37865917)	C	L2c	LINE/L2	(108)	3267	2993	1621946
2085	18.1	5.6	1.2	chr17	45731121	45731529	(37525912)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1622677
945	23.8	3.3	1.8	chr17	45855154	45855419	(37402022)	+	MLT1D	LTR/ERVL-MaLR	196	493	(12)	1622911
433	16.8	13.6	0.0	chr17	45948996	45949090	(37308351)	C	L1MB7	LINE/L1	(0)	6184	6075	1623100
379	20.8	14.3	0.3	chr17	46120616	46120825	(37136616)	C	L1MC2	LINE/L1	(8)	6336	6067	1623411
12	31.3	0.0	0.0	chr17	47324096	47324142	(35933299)	+	G-rich	Low_complexity	1	47	(0)	1625797
42	20.9	2.0	6.7	chr17	47719171	47719329	(35538112)	+	GA-rich	Low_complexity	1	151	(0)	1626600
1653	9.5	4.8	10.2	chr17	48434869	48435153	(34822288)	+	AluJr	SINE/Alu	29	297	(15)	1627834
260	24.6	15.6	0.0	chr17	49300193	49300257	(33957184)	C	MER20B	DNA/hAT-Charlie	(608)	175	99	1629642
436	31.5	0.6	3.5	chr17	49951578	49951748	(33305693)	C	MIRc	SINE/MIR	(12)	256	91	1630875
215	32.4	0.0	2.9	chr17	49975048	49975117	(33282324)	+	MIR3	SINE/MIR	31	98	(170)	1630916
1701	30.6	17.2	2.2	chr17	50282966	50284664	(32972777)	+	L2	LINE/L2	846	2853	(566)	1631458
691	25.4	0.0	9.2	chr17	50475738	50475930	(32781511)	C	L1MB8	LINE/L1	(48)	6130	5946	1631854
594	25.9	9.8	2.5	chr17	50476466	50476629	(32780812)	C	MIRb	SINE/MIR	(35)	233	53	1631856
14	17.1	1.6	9.4	chr17	50866466	50866528	(32390913)	+	(CCCCGG)n	Simple_repeat	1	64	(0)	1632611
2294	20.2	17.2	0.7	chr17	51391823	51392382	(31865059)	C	MLT2F	LTR/ERVL	(9)	654	1	1633690
1692	19.6	3.6	3.6	chr17	51539627	51540013	(31717428)	C	MER96B	DNA/hAT-Tip100	(1)	416	30	1633972
436	30.5	8.1	2.2	chr17	51540021	51540288	(31717153)	+	LTR88a	LTR/Gypsy?	188	472	(344)	1633973
302	33.9	3.5	4.3	chr17	54973158	54973274	(28284167)	C	MIR3	SINE/MIR	(77)	131	16	1638852
14	4.5	4.3	0.0	chr17	54973307	54973329	(28284112)	+	(ACA)n	Simple_repeat	1	24	(0)	1638853
16	12.7	0.0	5.3	chr17	55265690	55265727	(27991714)	+	(CCCCG)n	Simple_repeat	1	38	(0)	1639348
27	0.0	0.0	0.0	chr17	56595032	56595057	(26662384)	+	(T)n	Simple_repeat	1	26	(0)	1641538
3682	13.4	2.3	2.0	chr17	56820066	56820668	(26436773)	C	MER6A	DNA/TcMar-Tigger	(0)	605	1	1642043
513	28.6	0.8	0.9	chr17	57043012	57043158	(26214283)	+	MER77	LTR/ERVL	422	603	(1)	1642511
621	21.8	13.8	2.1	chr17	57135193	57135384	(26122057)	+	MIR	SINE/MIR	45	262	(0)	1642714
1247	28.9	3.6	4.5	chr17	58052778	58053309	(25204132)	+	L2	LINE/L2	1172	1698	(1721)	1644361
272	34.1	6.8	4.4	chr17	58053310	58053784	(25203657)	+	L2-3_Crp	LINE/L2	522	1008	(1088)	1644362
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
25	22.6	2.8	6.4	chr17	60392137	60392243	(22865198)	+	(CTC)n	Simple_repeat	1	110	(0)	1649144
404	30.9	26.0	2.1	chr17	61326085	61326819	(21930622)	C	L2c	LINE/L2	(91)	3296	2349	1650878
234	30.1	15.4	1.6	chr17	64137135	64137270	(19120171)	C	L2c	LINE/L2	(229)	3158	3001	1655970
2394	10.8	0.0	0.0	chr17	64137449	64137754	(19119687)	C	AluSz	SINE/Alu	(5)	307	2	1655973
1544	12.9	0.0	0.5	chr17	64920550	64920766	(18336675)	C	AluSz	SINE/Alu	(96)	216	1	1657596
1254	18.5	14.0	0.7	chr17	64920771	64921042	(18336399)	C	MER21B	LTR/ERVL	(554)	314	1	1657597
299	23.4	5.5	9.3	chr17	64921116	64921266	(18336175)	C	MER20B	DNA/hAT-Charlie	(638)	145	1	1657598
11	23.3	0.0	8.5	chr17	65693238	65693296	(17564145)	+	(CCCTGCC)n	Simple_repeat	1	59	(0)	1659139
377	35.3	1.6	1.1	chr17	66937552	66937740	(16319701)	+	L2	LINE/L2	2617	2806	(613)	1661098
180	27.1	10.6	0.0	chr17	66937829	66937887	(16319554)	+	L2c	LINE/L2	3317	3382	(5)	1661099
2371	11.1	3.3	0.8	chr17	66938098	66938452	(16318989)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1661100
15	14.8	2.4	4.8	chr17	68512499	68512539	(14744902)	+	(CGC)n	Simple_repeat	1	42	(0)	1664337
614	30.3	8.7	1.9	chr17	68714521	68714795	(14542646)	+	LTR81C	LTR/Gypsy	122	420	(930)	1664685
681	31.4	9.2	5.1	chr17	68715054	68715623	(14541818)	+	LTR81C	LTR/Gypsy	544	1139	(14)	1664685
3959	29.9	8.4	2.5	chr17	71969409	71971539	(11285902)	C	L2a	LINE/L2	(809)	2610	334	1669608
2182	15.4	3.5	4.9	chr17	72682373	72682561	(10574880)	+	Tigger2a	DNA/TcMar-Tigger	262	431	(3)	1670818
1363	20.5	14.3	6.3	chr17	72985777	72986203	(10271238)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	1671371
252	20.0	1.8	1.8	chr17	72986385	72986440	(10271001)	+	MER5A1	DNA/hAT-Charlie	51	106	(60)	1671372
627	23.1	1.4	0.7	chr17	72986572	72986715	(10270726)	+	MER5A1	DNA/hAT-Charlie	21	165	(1)	1671373
60	0.0	0.0	0.0	chr17	73310744	73310794	(9946647)	+	(CA)n	Simple_repeat	1	51	(0)	1672050
21	8.8	0.0	4.9	chr17	73732189	73732229	(9525212)	+	(AAAAT)n	Simple_repeat	1	41	(0)	1672858
2282	16.3	4.7	0.0	chr17	74064095	74064500	(9192941)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1673430
356	35.2	9.5	1.4	chr17	74064520	74064732	(9192709)	C	MIRc	SINE/MIR	(25)	243	12	1673431
911	20.5	3.3	2.1	chr17	74184985	74185223	(9072218)	C	MER5C	DNA/hAT-Charlie	(67)	246	5	1673644
1909	14.2	1.3	4.4	chr17	75368527	75368843	(7888598)	C	AluJb	SINE/Alu	(3)	309	3	1675966
1806	16.1	3.6	0.3	chr17	75411657	75411947	(7845494)	+	AluJb	SINE/Alu	1	301	(11)	1676059
277	34.1	11.0	4.5	chr17	75411948	75412117	(7845324)	+	L2c	LINE/L2	3203	3386	(1)	1676058
749	18.1	10.1	4.9	chr17	75585595	75585723	(7671718)	C	L1MA4	LINE/L1	(7)	6293	6144	1676421
2657	6.2	2.3	0.3	chr17	75585724	75586060	(7671381)	C	LTR14A	LTR/ERVK	(0)	344	1	1676422
749	18.1	10.1	4.9	chr17	75586061	75586174	(7671267)	C	L1MA4	LINE/L1	(157)	6143	6036	1676421
13	19.6	2.9	0.0	chr17	75844445	75844479	(7412962)	+	G-rich	Low_complexity	1	36	(0)	1676867
21	9.5	0.0	0.0	chr17	75844781	75844814	(7412627)	+	(GTGGG)n	Simple_repeat	1	34	(0)	1676868
356	38.2	7.6	0.8	chr17	76013283	76013810	(7243631)	+	L2a	LINE/L2	2245	2811	(608)	1677228
195	29.5	7.6	0.0	chr17	76014097	76014184	(7243257)	+	L2a	LINE/L2	3273	3409	(17)	1677228
2468	7.2	0.0	0.3	chr17	76029083	76029387	(7228054)	C	AluSx1	SINE/Alu	(5)	307	4	1677251
906	25.3	5.6	0.8	chr17	76554769	76554903	(6702538)	+	MIR	SINE/MIR	12	155	(107)	1678268
4174	8.2	1.3	0.9	chr17	76554904	76555040	(6702401)	C	MER41A	LTR/ERV1	(0)	554	417	1678269
2654	9.1	8.7	4.2	chr17	76611085	76611511	(6645930)	C	LTR7	LTR/ERV1	(2)	448	1	1678381
461	25.8	8.6	2.3	chr17	76611587	76611717	(6645724)	+	L2a	LINE/L2	3282	3421	(5)	1678382
1261	19.0	2.8	2.4	chr17	76611726	76611978	(6645463)	+	AluJb	SINE/Alu	9	262	(50)	1678383
2394	10.0	0.0	0.0	chr17	76788863	76789162	(6468279)	+	AluSx	SINE/Alu	4	303	(9)	1678754
3459	15.3	2.1	0.4	chr17	76789163	76789725	(6467716)	C	MER50	LTR/ERV1	(161)	573	1	1678755
428	32.2	0.7	1.4	chr17	77020876	77021020	(6236421)	C	MIR	SINE/MIR	(1)	261	118	1679260
2516	13.5	1.2	3.4	chr17	77021033	77021468	(6235973)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	1679261
238	23.8	0.0	16.5	chr17	77234120	77234240	(6023201)	C	L2a	LINE/L2	(469)	2950	2850	1679690
2093	12.1	0.3	1.3	chr17	78034055	78034352	(5223089)	C	AluSq2	SINE/Alu	(14)	299	5	1681092
510	7.8	0.0	0.0	chr17	78101967	78102030	(5155411)	C	THE1B	LTR/ERVL-MaLR	(300)	64	1	1681203
1024	4.7	7.2	0.0	chr17	78254012	78254140	(5003301)	C	MER85	DNA/PiggyBac	(0)	139	1	1681497
13	8.4	0.0	3.7	chr17	78590269	78590295	(4667146)	+	(CCCCA)n	Simple_repeat	1	27	(0)	1682080
561	22.9	15.1	0.0	chr17	78590306	78590462	(4666979)	+	MER5A	DNA/hAT-Charlie	5	189	(0)	1682081
2380	9.7	0.0	0.0	chr17	78739937	78740235	(4517206)	C	AluSx1	SINE/Alu	(13)	299	1	1682354
441	23.1	0.8	9.7	chr17	78740371	78740514	(4516927)	C	MLT1M	LTR/ERVL-MaLR	(349)	323	193	1682355
280	38.8	1.0	0.0	chr17	78993146	78993243	(4264198)	+	L2b	LINE/L2	3276	3374	(1)	1682830
13	8.9	16.7	0.0	chr17	79181618	79181665	(4075776)	+	(GCCACT)n	Simple_repeat	1	56	(0)	1683092
50	2.2	0.0	0.0	chr17	79181963	79182009	(4075432)	+	(AC)n	Simple_repeat	1	47	(0)	1683093
12	17.0	2.2	6.5	chr17	79384115	79384159	(3873282)	+	G-rich	Low_complexity	1	46	(0)	1683359
3212	23.2	5.2	1.4	chr17	79907611	79908468	(3348973)	C	MER45B	DNA/hAT-Tip100	(42)	998	107	1684153
1804	22.4	5.8	3.0	chr17	79990580	79991086	(3266355)	C	L1MB3	LINE/L1	(5)	6178	5657	1684256
563	26.8	0.6	4.3	chr17	80303029	80303192	(2954249)	C	L2a	LINE/L2	(0)	3426	3269	1684851
2289	9.4	1.0	3.4	chr17	80303554	80303873	(2953568)	C	AluSz6	SINE/Alu	(0)	312	1	1684852
2781	13.2	2.7	11.0	chr17	80976198	80976385	(2281056)	+	L1MB5	LINE/L1	5294	5481	(693)	1685717
2362	14.3	1.9	17.6	chr17	82176011	82176716	(1080725)	+	LTR14B	LTR/ERVK	15	607	(1)	1687271
1471	6.3	8.1	3.3	chr17	82176718	82176962	(1080479)	+	MER4-int	LTR/ERV1	217	474	(6124)	1687270
223	22.1	8.4	0.0	chr17	82213768	82213873	(1043568)	+	L2a	LINE/L2	2971	3090	(336)	1687346
152	20.1	1.9	3.6	chr17	82293107	82293531	(963910)	+	G-rich	Low_complexity	1	417	(0)	1687437
419	29.1	9.7	3.0	chr17	82743634	82743835	(513606)	C	MIR	SINE/MIR	(37)	225	9	1688181
61	24.2	1.3	10.3	chr17	82750769	82751153	(506288)	+	(CCCTTC)n	Simple_repeat	1	390	(0)	1688194
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
1045	26.0	9.3	2.9	chr18	3162119	3162569	(77210716)	+	MER74B	LTR/ERVL	66	548	(74)	1693884
326	26.2	7.5	5.9	chr18	3409640	3409809	(76963476)	+	HAL1ME	LINE/L1	2273	2445	(20)	1694344
440	17.7	1.2	0.0	chr18	5899148	5899226	(74474059)	C	MER53	DNA/hAT	(96)	97	18	1697839
393	4.9	22.8	0.0	chr18	8004657	8004717	(72368568)	C	MADE1	DNA/TcMar-Mariner	(0)	80	2	1700858
18	28.9	0.0	0.0	chr18	8697022	8697071	(71676214)	+	(TT)n	Simple_repeat	1	50	(0)	1701796
241	17.9	10.9	0.0	chr18	8697076	8697198	(71676087)	+	Zaphod	DNA/hAT-Tip100	697	834	(3197)	1701797
13	25.4	0.0	2.3	chr18	8706420	8706463	(71666822)	+	(CCCGCAG)n	Simple_repeat	1	44	(0)	1701820
13	10.8	3.1	3.0	chr18	9895369	9895400	(70477885)	+	(AGTCCA)n	Simple_repeat	1	33	(0)	1703829
7456	7.3	1.6	2.5	chr18	15343747	15344757	(65028528)	C	LTR5B	LTR/ERVK	(0)	1002	1	1711503
4271	17.6	4.0	2.1	chr18	21088530	21088582	(59284703)	+	L1MDa	LINE/L1	3431	3480	(3057)	1711881
1793	18.2	4.2	1.8	chr18	21088598	21088995	(59284290)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	1711883
937	16.9	14.1	4.3	chr18	22223402	22223611	(58149674)	+	L1MC1	LINE/L1	6098	6331	(2)	1714178
1825	16.4	9.9	2.3	chr18	24550146	24550543	(55822742)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1718149
2698	13.3	4.2	1.4	chr18	24790465	24790882	(55582403)	+	MSTB1	LTR/ERVL-MaLR	3	432	(0)	1718467
2925	18.8	6.6	6.6	chr18	24964129	24964810	(55408475)	C	LTR8A	LTR/ERV1	(12)	715	34	1718748
798	25.0	1.2	12.7	chr18	24964858	24965010	(55408275)	+	MIR	SINE/MIR	10	157	(105)	1718749
245	26.0	0.0	16.1	chr18	25606819	25606905	(54766380)	C	L2c	LINE/L2	(24)	3363	3291	1719562
7336	21.5	12.6	3.1	chr18	26442425	26444672	(53928613)	C	L1MEc	LINE/L1	(2850)	3469	915	1720925
1977	11.7	0.7	7.5	chr18	26699274	26699580	(53673705)	+	AluJo	SINE/Alu	1	286	(26)	1721376
407	25.3	5.8	2.2	chr18	28039413	28039552	(52333733)	C	MIRc	SINE/MIR	(51)	217	67	1723229
181	36.3	6.2	2.1	chr18	29060004	29060096	(51313189)	C	L2c	LINE/L2	(13)	3374	3278	1724544
12	16.8	0.0	0.0	chr18	29060168	29060194	(51313091)	+	(CCTC)n	Simple_repeat	1	27	(0)	1724545
2923	13.7	6.4	9.9	chr18	30044443	30045057	(50328228)	+	LTR14B	LTR/ERVK	17	608	(0)	1725802
553	32.1	2.5	3.5	chr18	33660062	33660264	(46713021)	+	MIRb	SINE/MIR	20	220	(48)	1730998
23	15.2	3.1	4.5	chr18	34224917	34224929	(46148356)	+	(CCCCT)n	Simple_repeat	1	29	(40)	1731667
13	21.5	4.7	0.0	chr18	34224930	34224972	(46148313)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	1731668
23	15.2	3.1	4.5	chr18	34224973	34224987	(46148298)	+	(CCCCT)n	Simple_repeat	30	69	(0)	1731667
13	17.6	2.5	2.4	chr18	34225082	34225121	(46148164)	+	(GCAGGCT)n	Simple_repeat	1	41	(0)	1731669
14	24.6	0.0	3.9	chr18	34225331	34225382	(46147903)	+	(TCCCCCT)n	Simple_repeat	1	52	(0)	1731670
1981	17.3	8.9	1.5	chr18	34286795	34287188	(46086097)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1731740
8001	18.4	4.9	3.7	chr18	34287189	34288819	(46084466)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1	1731740
25	8.6	0.0	2.6	chr18	34493213	34493251	(45880034)	+	(TG)n	Simple_repeat	1	39	(0)	1732026
13	15.8	2.7	2.6	chr18	34493261	34493297	(45879988)	+	GA-rich	Low_complexity	1	38	(0)	1732027
939	21.7	12.2	0.0	chr18	35235741	35235970	(45137315)	C	MIR	SINE/MIR	(0)	262	1	1733032
36	31.0	4.1	2.5	chr18	35514069	35514265	(44859020)	+	(ACATAC)n	Simple_repeat	1	200	(0)	1733421
253	17.4	0.0	4.2	chr18	35580690	35580761	(44792524)	C	MLT1N2	LTR/ERVL-MaLR	(13)	549	481	1733544
3377	18.2	1.2	4.1	chr18	35730023	35730685	(44642600)	+	MER73	LTR/ERVL	1	644	(0)	1733736
1372	18.1	13.7	3.9	chr18	36303966	36304449	(44068836)	+	L1MC5	LINE/L1	8764	9302	(2)	1734622
533	24.7	8.9	1.7	chr18	36407716	36407892	(43965393)	+	MIR	SINE/MIR	2	192	(70)	1734758
16	19.6	2.9	0.0	chr18	37435352	37435386	(42937899)	+	(TG)n	Simple_repeat	1	36	(0)	1736042
396	24.2	9.2	0.8	chr18	37611928	37612056	(42761229)	+	MIR	SINE/MIR	122	262	(0)	1736297
14	0.0	4.8	0.0	chr18	38427600	38427649	(41945636)	+	(AGGA)n	Simple_repeat	1	52	(0)	1737373
277	27.2	14.5	5.4	chr18	45590090	45590249	(34783036)	C	MIR3	SINE/MIR	(37)	171	2	1747146
241	35.8	0.0	1.2	chr18	45590358	45590439	(34782846)	+	LFSINE_Vert	SINE/tRNA	116	196	(263)	1747147
16137	11.1	2.9	1.4	chr18	45806325	45810512	(34562773)	+	L1PBa1	LINE/L1	251	4503	(2359)	1747462
252	26.4	16.2	1.5	chr18	46235150	46235280	(34138005)	C	Tigger19b	DNA/TcMar-Tigger	(47)	503	350	1748299
2693	13.9	4.2	0.2	chr18	47767549	47767987	(32605298)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	1750769
2538	15.2	4.2	4.0	chr18	47767988	47768424	(32604861)	+	L1MD	LINE/L1	5144	5608	(634)	1750760
1694	21.9	3.6	2.4	chr18	50355622	50356137	(30017148)	+	L1M4	LINE/L1	2423	2956	(3688)	1754996
2858	13.8	2.0	3.7	chr18	50356138	50356602	(30016683)	+	MSTB2	LTR/ERVL-MaLR	1	457	(0)	1754999
337	34.9	3.1	5.3	chr18	51012257	51012519	(29360766)	C	MLT1K	LTR/ERVL-MaLR	(6)	589	333	1756203
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
1482	18.8	7.4	2.4	chr18	62058906	62059198	(18314087)	+	AluJb	SINE/Alu	1	309	(3)	1772874
12389	17.2	3.1	1.8	chr18	70156793	70162379	(10210906)	+	L1PA16	LINE/L1	926	6629	(157)	1784133
4384	12.2	6.4	6.9	chr18	70262784	70263621	(10109664)	+	THE1B-int	LTR/ERVL-MaLR	1	833	(747)	1784291
4479	7.4	4.0	0.0	chr18	77238997	77239577	(3133708)	+	LTR14B	LTR/ERVK	4	608	(0)	1793257
872	25.4	3.8	3.2	chr18	79052557	79052898	(1320387)	+	HAL1	LINE/L1	50	393	(2114)	1795113
521	31.8	6.9	3.2	chr18	79053050	79053426	(1319859)	+	HAL1	LINE/L1	700	1091	(1416)	1795113
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
1720	19.1	7.2	0.0	chr18	79677260	79677620	(695665)	C	MER57B2	LTR/ERV1	(0)	403	15	1795683
226	31.2	3.8	0.0	chr18	79677628	79677704	(695581)	C	HAL1M8	LINE/L1	(2808)	183	104	1795684
2621	4.3	0.0	0.0	chr18	79966867	79967165	(406120)	+	AluY	SINE/Alu	1	299	(12)	1795950
207	30.9	1.4	0.0	chr19	292432	292499	(58325117)	C	MIR	SINE/MIR	(167)	95	27	1796698
379	20.4	2.1	0.0	chr19	560172	560264	(58057352)	C	LTR10B2	LTR/ERV1	(0)	503	409	1797152
314	22.9	3.2	2.1	chr19	560296	560419	(58057197)	C	LTR10B2	LTR/ERV1	(217)	416	205	1797152
2394	9.7	0.2	8.2	chr19	560496	560534	(58057082)	C	HERVIP10B3-int	LTR/ERV1	(0)	7603	7572	1797153
2411	6.9	0.0	1.0	chr19	560535	560838	(58056778)	C	AluY	SINE/Alu	(10)	301	1	1797154
1766	10.4	7.8	5.9	chr19	781781	781918	(57835698)	+	AluSx	SINE/Alu	146	293	(19)	1797599
244	35.8	3.4	0.9	chr19	925385	925516	(57692100)	C	MIRc	SINE/MIR	(106)	162	25	1797903
34	0.0	0.0	0.0	chr19	929482	929512	(57688104)	+	(GTG)n	Simple_repeat	1	31	(0)	1797907
15	24.6	1.9	1.9	chr19	1028682	1028743	(57588873)	+	G-rich	Low_complexity	1	62	(0)	1798104
2023	9.5	3.8	0.7	chr19	1038591	1038873	(57578743)	C	AluSq	SINE/Alu	(21)	292	1	1798124
194	27.9	9.7	6.0	chr19	1039302	1039450	(57578166)	+	L2c	LINE/L2	3002	3156	(231)	1798125
2460	7.9	0.0	0.3	chr19	1247129	1247432	(57370184)	C	AluSc	SINE/Alu	(6)	303	1	1798459
197	36.8	2.2	3.6	chr19	1247433	1247533	(57370083)	+	L2c	LINE/L2	3078	3176	(211)	1798457
194	28.3	14.0	4.2	chr19	1298135	1298230	(57319386)	C	MIR3	SINE/MIR	(86)	122	16	1798514
190	31.9	0.0	0.0	chr19	1503797	1503843	(57113773)	+	L2a	LINE/L2	3377	3423	(3)	1798893
184	26.5	17.0	1.9	chr19	1503894	1504047	(57113569)	C	MIR3	SINE/MIR	(18)	190	9	1798894
2203	9.9	0.0	0.0	chr19	1624116	1624398	(56993218)	+	AluSc	SINE/Alu	1	283	(26)	1799160
14	18.8	0.0	0.0	chr19	1624400	1624430	(56993186)	+	(ACA)n	Simple_repeat	1	31	(0)	1799161
816	26.4	9.9	3.4	chr19	1624596	1624853	(56992763)	+	Tigger17	DNA/TcMar-Tigger	1	285	(2388)	1799162
221	31.4	8.1	2.8	chr19	2497228	2497368	(56120248)	C	MIR3	SINE/MIR	(58)	150	2	1800941
1028	22.6	1.6	0.8	chr19	2497408	2497657	(56119959)	C	MLT1D	LTR/ERVL-MaLR	(1)	504	253	1800942
2126	25.3	6.1	0.7	chr19	2614312	2614926	(56002690)	C	L1MB5	LINE/L1	(10)	6164	5520	1801243
1278	16.9	7.0	0.0	chr19	2824715	2824992	(55792624)	C	L1MB3	LINE/L1	(21)	6162	5864	1801721
1958	15.2	0.0	0.3	chr19	2825004	2825313	(55792303)	C	AluSz6	SINE/Alu	(0)	312	1	1801722
12	23.3	4.4	0.0	chr19	2926365	2926409	(55691207)	+	(CCACGG)n	Simple_repeat	1	47	(0)	1801931
251	17.7	2.5	12.2	chr19	2943278	2943367	(55674249)	+	MER92B	LTR/ERV1	542	622	(14)	1801967
711	23.4	20.1	3.5	chr19	2943377	2943696	(55673920)	+	MER92A	LTR/ERV1	1	398	(14)	1801969
306	25.2	13.7	0.9	chr19	4131134	4131241	(54486375)	+	L1M5	LINE/L1	5560	5683	(559)	1804812
380	27.1	8.3	0.0	chr19	4131247	4131390	(54486226)	+	L1ME3F	LINE/L1	5705	5861	(382)	1804813
622	17.6	0.0	1.9	chr19	4131392	4131499	(54486117)	+	FLAM_A	SINE/Alu	25	130	(12)	1804814
1828	12.5	9.8	1.1	chr19	4236373	4236543	(54381073)	+	AluSx1	SINE/Alu	136	307	(5)	1805115
16	16.4	0.0	0.0	chr19	4343754	4343787	(54273829)	+	(GGACGA)n	Simple_repeat	1	34	(0)	1805403
28	27.4	0.0	3.9	chr19	4343803	4343905	(54273711)	+	G-rich	Low_complexity	1	103	(0)	1805404
2240	11.2	0.7	0.3	chr19	4571937	4572240	(54045376)	C	AluSx	SINE/Alu	(7)	305	1	1805899
315	31.2	7.8	1.0	chr19	4851623	4851933	(53765683)	C	L2	LINE/L2	(435)	2984	2651	1806670
1329	23.6	6.7	1.5	chr19	5354366	5354825	(53262791)	C	L2a	LINE/L2	(289)	3137	2644	1807743
239	24.1	0.0	3.3	chr19	5503985	5504044	(53113572)	C	MIRb	SINE/MIR	(91)	177	120	1808175
732	27.8	2.4	1.4	chr19	5504093	5504387	(53113229)	+	L2a	LINE/L2	2565	2862	(557)	1808176
2673	24.5	14.6	1.8	chr19	5632229	5632734	(52984882)	C	L1MC4	LINE/L1	(2)	8040	7445	1808493
128	29.0	1.7	0.7	chr19	6529393	6529813	(52087803)	+	GA-rich	Low_complexity	1	428	(0)	1810494
192	26.3	1.3	5.9	chr19	6586929	6587548	(52030068)	+	GA-rich	Low_complexity	110	754	(0)	1810652
2203	22.3	7.1	1.3	chr19	6587557	6587714	(52029902)	+	MER54A	LTR/ERVL	334	512	(389)	1810655
1630	13.9	1.4	2.8	chr19	6587715	6588001	(52029615)	C	AluJr	SINE/Alu	(17)	295	13	1810656
1743	23.1	2.5	2.3	chr19	7743450	7743884	(50873732)	+	MER74A	LTR/ERVL	123	558	(0)	1813629
33559	12.2	1.3	0.8	chr19	9454393	9459482	(49158134)	+	HERVK9-int	LTR/ERVK	1	4889	(1132)	1817462
1456	13.3	20.3	2.6	chr19	9459486	9459987	(49157629)	C	LTR14B	LTR/ERVK	(0)	608	16	1817463
2895	13.8	6.5	0.0	chr19	9462120	9462598	(49155018)	+	MER9a3	LTR/ERVK	1	512	(0)	1817462
930	31.2	2.9	7.3	chr19	9933856	9934065	(48683551)	+	L2a	LINE/L2	3202	3386	(1)	1818492
915	30.4	3.6	12.4	chr19	9939565	9939991	(48677625)	+	LTR33A	LTR/ERVL	22	403	(117)	1818504
5329	25.6	3.4	4.1	chr19	10030209	10031775	(48585841)	C	HERVH-int	LTR/ERV1	(3725)	2804	1518	1818732
2474	7.1	0.0	0.0	chr19	10223206	10223500	(48394116)	+	AluY	SINE/Alu	2	296	(15)	1819203
408	28.4	5.4	4.5	chr19	10223508	10223728	(48393888)	C	MamRep38	DNA/hAT	(69)	226	4	1819204
353	19.3	1.2	5.7	chr19	10544505	10544592	(48073024)	+	MIR	SINE/MIR	81	164	(98)	1820057
240	27.2	3.6	0.0	chr19	10864884	10864964	(47752652)	C	L2b	LINE/L2	(1020)	2399	2316	1820864
2358	8.6	1.6	0.0	chr19	10865144	10865446	(47752170)	C	AluSx1	SINE/Alu	(4)	308	1	1820872
2073	12.4	0.0	0.3	chr19	10882535	10882842	(47734774)	C	AluSz	SINE/Alu	(0)	312	1	1820920
4363	13.5	0.9	0.1	chr19	11621892	11622560	(46995056)	C	HERVK3-int	LTR/ERVK	(1885)	5317	4644	1822816
3239	11.1	6.9	8.0	chr19	12450589	12451187	(46166429)	+	LTR14B	LTR/ERVK	17	608	(0)	1824469
9115	9.8	0.2	0.0	chr19	12451188	12452383	(46165233)	+	HERVK14-int	LTR/ERVK	1	1199	(4897)	1824469
2379	9.0	0.3	0.0	chr19	12917660	12917958	(45699658)	C	AluSp	SINE/Alu	(13)	300	1	1825526
794	21.7	6.5	0.0	chr19	12917972	12918128	(45699488)	+	AluJb	SINE/Alu	131	298	(14)	1825527
2079	9.1	2.8	0.7	chr19	13227932	13228207	(45389409)	C	AluJo	SINE/Alu	(30)	282	1	1826194
15	15.8	5.4	7.7	chr19	13228302	13228375	(45389241)	+	G-rich	Low_complexity	1	78	(0)	1826195
10810	25.0	2.0	3.5	chr19	15829642	15834725	(42782891)	+	HERVH-int	LTR/ERV1	791	5453	(2260)	1832598
290	25.2	2.9	0.0	chr19	16628871	16628969	(41988647)	C	MER20	DNA/hAT-Charlie	(3)	216	115	1834294
1698	19.7	0.3	0.3	chr19	16952396	16952690	(41664926)	+	AluJb	SINE/Alu	1	295	(17)	1835149
23	20.3	1.4	5.4	chr19	17538747	17538819	(41078797)	+	GA-rich	Low_complexity	1	74	(0)	1836641
239	33.3	14.3	1.4	chr19	17538831	17538976	(41078640)	+	MER91A	DNA/hAT-Tip100	1	168	(28)	1836642
2242	10.1	0.3	0.3	chr19	17614010	17614306	(41003310)	C	AluSx1	SINE/Alu	(15)	297	1	1836834
2285	10.7	0.0	0.0	chr19	18305625	18305922	(40311694)	+	AluSz	SINE/Alu	1	298	(14)	1838585
306	35.6	5.7	0.6	chr19	18416486	18416841	(40200775)	+	L2c	LINE/L2	2798	3187	(188)	1838866
22	8.6	0.0	2.6	chr19	18611652	18611690	(40005926)	+	(GGGAG)n	Simple_repeat	1	39	(0)	1839221
270	28.7	5.0	2.1	chr19	19430092	19430187	(39187429)	C	MER58A	DNA/hAT-Charlie	(88)	136	38	1840976
13	7.7	0.0	9.1	chr19	19430245	19430277	(39187339)	+	(CCAG)n	Simple_repeat	1	33	(0)	1840977
13	21.8	0.0	0.0	chr19	19635600	19635632	(38981984)	+	(TGCCC)n	Simple_repeat	1	33	(0)	1841344
1456	19.1	9.6	9.2	chr19	19975539	19975825	(38641791)	+	MSTB1	LTR/ERVL-MaLR	1	292	(140)	1841904
2809	4.7	1.4	0.0	chr19	19975826	19976164	(38641452)	C	LTR14A	LTR/ERVK	(0)	344	1	1841905
1456	19.1	9.6	9.2	chr19	19976165	19976302	(38641314)	+	MSTB1	LTR/ERVL-MaLR	293	428	(4)	1841904
1645	13.8	4.9	0.4	chr19	20272908	20273139	(38344477)	+	AluSg	SINE/Alu	1	243	(67)	1842379
2961	14.6	5.1	8.5	chr19	20273140	20273754	(38343862)	C	LTR14B	LTR/ERVK	(0)	608	16	1842380
11174	11.0	0.4	1.4	chr19	20320047	20321730	(38295886)	C	HERVK14-int	LTR/ERVK	(4428)	1668	1	1842455
2735	15.6	3.4	8.0	chr19	20321731	20322352	(38295264)	C	LTR14B	LTR/ERVK	(0)	608	17	1842455
6196	7.8	0.2	1.0	chr19	20469213	20470077	(38147539)	C	HERVL66-int	LTR/ERVL	(2891)	1438	581	1842693
2731	14.5	3.7	9.9	chr19	20470078	20470711	(38146905)	C	LTR14B	LTR/ERVK	(0)	608	16	1842694
4210	6.5	5.9	0.7	chr19	20709728	20710303	(37907313)	C	LTR14B	LTR/ERVK	(0)	608	1	1843029
3090	12.9	0.6	0.0	chr19	21077237	21077716	(37539900)	+	MSTA-int	LTR/ERVL-MaLR	1149	1631	(0)	1843486
289	15.7	0.0	0.0	chr19	21077717	21077767	(37539849)	+	MSTA	LTR/ERVL-MaLR	1	51	(377)	1843486
336	31.4	2.4	2.4	chr19	29584045	29584168	(29033448)	+	L1MEd	LINE/L1	1979	2102	(4984)	1850443
457	27.3	1.7	6.5	chr19	29584227	29584410	(29033206)	C	LTR16A2	LTR/ERVL	(69)	426	252	1850444
798	24.9	18.5	0.6	chr19	29617976	29618294	(28999322)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	2	1850495
1811	11.3	0.0	0.4	chr19	29716868	29717115	(28900501)	+	AluSx	SINE/Alu	2	248	(64)	1850685
1321	10.7	0.0	0.0	chr19	30617135	30617321	(28000295)	C	L1PB1	LINE/L1	(0)	6151	5965	1852108
2275	9.2	0.0	0.0	chr19	30617334	30617649	(27999967)	C	AluY	SINE/Alu	(0)	311	1	1852109
18	17.5	2.1	2.1	chr19	30959896	30959942	(27657674)	+	(CTTC)n	Simple_repeat	1	48	(0)	1852516
345	33.0	0.0	1.8	chr19	30959960	30960070	(27657546)	C	MIR	SINE/MIR	(6)	256	148	1852517
1923	14.5	0.3	4.1	chr19	32673872	32674188	(25943428)	+	AluJr	SINE/Alu	8	312	(0)	1855282
262	33.0	2.2	6.9	chr19	32967572	32967810	(25649806)	C	L2c	LINE/L2	(170)	3217	2997	1855832
1018	21.1	1.2	0.8	chr19	33911369	33911621	(24705995)	C	L1M5	LINE/L1	(901)	5543	5290	1857532
1323	15.4	0.5	1.9	chr19	33911639	33911846	(24705770)	C	AluJr	SINE/Alu	(106)	206	2	1857533
670	23.1	3.2	5.4	chr19	33911861	33911958	(24705658)	C	L1MC	LINE/L1	(1198)	4948	4851	1857534
1302	21.0	3.3	0.0	chr19	33938417	33938711	(24678905)	C	L1MB3	LINE/L1	(30)	6153	5849	1857583
276	27.1	11.9	4.0	chr19	33938723	33938822	(24678794)	C	MIRc	SINE/MIR	(63)	205	97	1857584
928	15.7	2.4	0.1	chr19	34973115	34973285	(23644331)	C	MLT1E3	LTR/ERVL-MaLR	(8)	616	372	1859418
550	22.0	2.8	3.4	chr19	34973392	34973537	(23644079)	+	MER5A1	DNA/hAT-Charlie	1	145	(21)	1859419
783	18.9	1.8	6.1	chr19	34973560	34973603	(23644013)	C	MER5B	DNA/hAT-Charlie	(0)	178	143	1859420
56	0.0	0.0	0.0	chr19	34973604	34973651	(23643965)	+	(GT)n	Simple_repeat	1	48	(0)	1859421
19	4.3	0.0	0.0	chr19	35138555	35138578	(23479038)	+	(GT)n	Simple_repeat	1	24	(0)	1859801
17	18.6	0.0	0.0	chr19	35138747	35138783	(23478833)	+	G-rich	Low_complexity	1	37	(0)	1859802
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
12	13.6	7.3	5.1	chr19	36498248	36498258	(22119358)	+	A-rich	Low_complexity	1	12	(0)	1862658
2193	10.4	0.3	0.0	chr19	36498259	36498548	(22119068)	+	AluSz	SINE/Alu	1	312	(0)	1862659
4287	15.4	10.1	1.9	chr19	36799599	36800393	(21817223)	+	LTR5B	LTR/ERVK	1	868	(134)	1863283
2518	8.7	0.0	0.0	chr19	36800401	36800710	(21816906)	C	AluSg	SINE/Alu	(0)	310	1	1863284
2540	8.4	0.0	0.0	chr19	36909528	36909836	(21707780)	+	AluSg	SINE/Alu	2	310	(0)	1863498
1269	29.8	7.2	5.2	chr19	36909837	36910008	(21707608)	+	HAL1	LINE/L1	2179	2375	(132)	1863497
2539	7.1	0.0	0.0	chr19	36910088	36910384	(21707232)	C	AluSq	SINE/Alu	(16)	297	1	1863499
728	19.2	1.9	0.6	chr19	37328923	37329079	(21288537)	+	MER5A	DNA/hAT-Charlie	10	168	(21)	1864248
720	19.6	8.6	0.7	chr19	38338729	38338867	(20278749)	+	AluJb	SINE/Alu	131	281	(31)	1866440
15	4.7	0.0	0.0	chr19	38338873	38338894	(20278722)	+	(TTAA)n	Simple_repeat	1	22	(0)	1866441
3707	7.0	4.9	2.8	chr19	38338918	38339494	(20278122)	C	LTR14B	LTR/ERVK	(0)	608	19	1866442
2251	7.3	0.7	1.3	chr19	38832884	38833185	(19784431)	+	AluY	SINE/Alu	1	300	(11)	1867548
1160	28.7	7.1	3.1	chr19	39161424	39161959	(19455657)	+	L2a	LINE/L2	2605	3180	(246)	1868424
373	16.4	0.7	0.4	chr19	39766053	39766125	(18851491)	C	FLAM_C	SINE/Alu	(80)	53	1	1869568
321	22.8	16.7	0.0	chr19	40190598	40190768	(18426848)	+	MIR	SINE/MIR	41	261	(7)	1870439
1502	21.5	16.0	1.3	chr19	40229389	40229935	(18387681)	C	L1MC3	LINE/L1	(67)	7718	7076	1870542
25	19.6	1.5	2.9	chr19	40348828	40348895	(18268721)	+	(TATAATA)n	Simple_repeat	1	69	(0)	1870837
382	32.6	3.1	2.1	chr19	40355702	40355850	(18261766)	C	L2b	LINE/L2	(0)	3426	3226	1870859
364	36.3	8.5	1.6	chr19	40356111	40356362	(18261254)	C	L2b	LINE/L2	(339)	3080	2810	1870859
245	30.7	0.1	1.1	chr19	40434245	40434336	(18183280)	+	MIRc	SINE/MIR	83	176	(86)	1871051
2325	6.2	2.7	0.0	chr19	40434442	40434729	(18182887)	C	AluSg	SINE/Alu	(14)	296	1	1871052
552	18.9	15.4	0.0	chr19	40465100	40465231	(18152385)	+	MIR	SINE/MIR	12	167	(95)	1871150
16	0.0	0.0	0.0	chr19	41859443	41859460	(16758156)	+	(T)n	Simple_repeat	1	18	(0)	1874069
17	16.5	4.1	2.0	chr19	42269438	42269486	(16348130)	+	G-rich	Low_complexity	1	51	(0)	1874929
725	28.9	6.9	2.4	chr19	44140935	44141225	(14476391)	+	L2	LINE/L2	468	772	(2647)	1878265
194	31.7	9.6	0.8	chr19	44141949	44142072	(14475544)	+	MIR	SINE/MIR	104	239	(23)	1878266
1192	10.6	0.3	0.0	chr19	44456469	44457877	(14159739)	C	ACRO1	Satellite/acro	(55)	1412	1	1878760
13	24.2	2.3	0.0	chr19	45153862	45153905	(13463711)	+	(GAGAGGC)n	Simple_repeat	1	45	(0)	1880571
12	31.2	1.9	0.0	chr19	45153906	45153912	(13463704)	+	(GGCGA)n	Simple_repeat	2	53	(0)	1880572
12	23.0	6.7	5.2	chr19	45154019	45154108	(13463508)	+	(GGCAGA)n	Simple_repeat	1	96	(0)	1880573
676	19.5	17.3	0.0	chr19	45154241	45154450	(13463166)	+	L2b	LINE/L2	3118	3371	(4)	1880574
47	20.0	4.3	2.8	chr19	46402192	46402329	(12215287)	+	GA-rich	Low_complexity	1	144	(0)	1883567
445	23.5	0.0	1.0	chr19	46402441	46402539	(12215077)	+	MLT1H	LTR/ERVL-MaLR	57	154	(395)	1883568
315	25.6	0.0	2.4	chr19	46402545	46402628	(12214988)	+	L2a	LINE/L2	2813	2894	(525)	1883569
767	25.6	2.5	0.5	chr19	46402642	46402837	(12214779)	C	MER3	DNA/hAT-Charlie	(5)	204	5	1883570
2103	7.9	0.7	6.9	chr19	46416109	46416289	(12201327)	+	AluSx	SINE/Alu	136	297	(15)	1883603
408	31.6	3.6	5.1	chr19	46416290	46416337	(12201279)	+	L2a	LINE/L2	2852	2898	(521)	1883602
15	18.6	2.1	4.2	chr19	46416659	46416705	(12200911)	+	(GGCGGA)n	Simple_repeat	1	48	(0)	1883605
2002	12.1	7.4	0.3	chr19	47242603	47242892	(11374724)	C	AluSq	SINE/Alu	(1)	312	1	1885630
30	29.3	0.8	5.3	chr19	47242925	47243056	(11374560)	+	(TG)n	Simple_repeat	1	133	(0)	1885631
34	21.6	3.3	0.0	chr19	47243283	47243373	(11374243)	+	(CCCGC)n	Simple_repeat	1	94	(0)	1885632
798	27.2	4.1	0.9	chr19	47277663	47277765	(11339851)	+	MIR	SINE/MIR	116	223	(39)	1885717
1267	11.6	22.8	0.0	chr19	47278160	47278392	(11339224)	C	AluSx1	SINE/Alu	(10)	302	1	1885721
439	25.1	5.0	5.0	chr19	47427349	47427570	(11190046)	+	LTR33	LTR/ERVL	280	501	(14)	1886141
284	32.2	12.2	5.3	chr19	47427626	47427907	(11189709)	+	L2	LINE/L2	2658	2961	(458)	1886142
4388	15.8	0.8	4.9	chr19	47910261	47910636	(10706980)	+	L1P4	LINE/L1	2855	3214	(2932)	1887394
15	8.8	4.2	0.0	chr19	48395300	48395323	(10222293)	+	(CT)n	Simple_repeat	1	25	(0)	1888655
15	7.0	2.9	5.7	chr19	49155536	49155569	(9462047)	+	(TCC)n	Simple_repeat	1	35	(0)	1890485
22	7.2	0.0	0.0	chr19	49161253	49161281	(9456335)	+	(TG)n	Simple_repeat	1	29	(0)	1890494
2164	14.9	8.7	6.7	chr19	49190846	49191195	(9426421)	C	MSTB	LTR/ERVL-MaLR	(0)	426	55	1890561
2059	14.5	0.7	0.7	chr19	49191196	49191505	(9426111)	C	AluSz	SINE/Alu	(2)	310	1	1890562
2221	12.0	0.0	0.3	chr19	49452714	49453021	(9164595)	C	AluSx	SINE/Alu	(5)	307	1	1891124
679	12.0	1.1	1.1	chr19	49713082	49713405	(8904211)	+	MSR1	Satellite	1	323	(0)	1891747
3323	11.1	5.3	6.1	chr19	49723099	49723692	(8893924)	+	LTR14B	LTR/ERVK	19	605	(3)	1891778
447	5.7	0.0	0.0	chr19	49723693	49723745	(8893871)	+	AluSx	SINE/Alu	84	136	(176)	1891779
1138	14.4	0.0	0.6	chr19	49723746	49723905	(8893711)	+	AluSx3	SINE/Alu	136	295	(16)	1891780
548	28.7	10.0	4.8	chr19	50031474	50031803	(8585813)	+	L2c	LINE/L2	3039	3387	(0)	1892463
519	35.3	4.2	1.4	chr19	50031827	50032105	(8585511)	+	L2b	LINE/L2	3077	3363	(12)	1892464
879	28.7	19.2	0.6	chr19	50384708	50385389	(8232227)	C	L2a	LINE/L2	(24)	3402	2482	1893387
2456	6.4	0.0	0.3	chr19	51071598	51071893	(7545723)	C	AluSc8	SINE/Alu	(16)	295	1	1894959
270	27.9	1.4	0.0	chr19	51072032	51072099	(7545517)	+	L1M5	LINE/L1	5731	5799	(395)	1894954
481	26.1	7.8	2.5	chr19	51072100	51072256	(7545360)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	1894960
1223	13.2	0.0	0.0	chr19	51121155	51121320	(7496296)	C	AluSx1	SINE/Alu	(11)	301	136	1895049
1703	11.7	0.0	0.8	chr19	51397104	51397350	(7220266)	C	AluSx1	SINE/Alu	(9)	303	59	1895545
3801	10.6	1.4	4.7	chr19	51397351	51397964	(7219652)	C	LTR14B	LTR/ERVK	(13)	595	3	1895546
290	26.2	3.6	0.0	chr19	51480732	51480811	(7136805)	C	MLT1E1	LTR/ERVL-MaLR	(569)	85	3	1895711
303	32.6	6.7	1.6	chr19	51480840	51481023	(7136593)	+	MIRb	SINE/MIR	20	213	(55)	1895712
2123	20.4	11.9	9.9	chr19	51898134	51898630	(6718986)	C	MER21C	LTR/ERVL	(43)	895	355	1896443
2204	11.9	0.0	1.3	chr19	51898631	51898940	(6718676)	+	AluSc	SINE/Alu	1	306	(3)	1896444
350	7.1	34.6	0.0	chr19	52135762	52135846	(6481770)	+	Tigger2	DNA/TcMar-Tigger	1400	1529	(1189)	1896844
2054	14.5	0.0	0.3	chr19	52135847	52136142	(6481474)	+	AluSz6	SINE/Alu	1	295	(17)	1896845
3358	17.6	2.2	11.7	chr19	52136159	52136199	(6481417)	+	L1MA9	LINE/L1	5324	5360	(952)	1896846
1775	10.4	11.3	0.4	chr19	52136200	52136458	(6481158)	+	AluSq2	SINE/Alu	2	292	(21)	1896847
12	19.6	0.0	5.1	chr19	52190438	52190476	(6427140)	+	(GGCTGG)n	Simple_repeat	1	39	(0)	1896965
1136	10.5	0.0	0.0	chr19	52922033	52922175	(5695441)	+	AluSx	SINE/Alu	1	143	(169)	1898469
3442	12.6	3.2	5.9	chr19	53443340	53443774	(5173842)	C	LTR14B	LTR/ERVK	(0)	608	186	1899362
6245	13.3	2.1	0.6	chr19	53443775	53444761	(5172855)	+	LTR5B	LTR/ERVK	1	1002	(0)	1899363
2256	11.0	2.8	4.4	chr19	53480827	53481312	(5136304)	C	LTR14B	LTR/ERVK	(2)	606	17	1899429
901	26.1	3.7	8.2	chr19	53889254	53889519	(4728097)	+	L2a	LINE/L2	3160	3425	(1)	1900515
677	12.9	0.6	0.4	chr19	54172108	54172694	(4444922)	+	MSR1	Satellite	1	587	(0)	1901229
14	26.9	1.8	1.8	chr19	54231443	54231497	(4386119)	+	(TATGTC)n	Simple_repeat	1	56	(0)	1901353
485	27.3	7.0	7.0	chr19	54665539	54665782	(3951834)	+	MIRb	SINE/MIR	14	257	(11)	1902125
20	14.4	0.0	2.4	chr19	54665858	54665898	(3951718)	+	(CTC)n	Simple_repeat	1	41	(0)	1902126
31	22.5	6.0	1.6	chr19	55466127	55466206	(3151410)	+	(TCTA)n	Simple_repeat	1	84	(0)	1903786
230	27.7	0.0	4.1	chr19	55648720	55648817	(2968799)	+	MSR1	Satellite	1	94	(17)	1904231
13	34.3	1.6	0.0	chr19	55654291	55654353	(2963263)	+	(TCCCCT)n	Simple_repeat	1	64	(0)	1904235
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
232	22.8	8.9	0.0	chr19	55709408	55709499	(2908117)	C	L1MC5a	LINE/L1	(48)	2729	2629	1904333
347	32.2	17.8	0.0	chr19	55709548	55709820	(2907796)	+	L2a	LINE/L2	1894	2225	(1194)	1904334
1214	20.1	8.9	4.3	chr19	56252323	56252644	(2364972)	C	LTR52	LTR/ERVL	(4)	417	80	1905467
462	26.9	10.4	3.2	chr19	56252868	56253117	(2364499)	C	LTR41B	LTR/ERVL	(488)	270	1	1905468
16	29.5	0.0	4.8	chr19	56404926	56404988	(2212628)	+	(TG)n	Simple_repeat	1	63	(0)	1905747
196	34.5	13.0	1.1	chr19	56538018	56538193	(2079423)	C	L2a	LINE/L2	(270)	3156	2957	1905961
506	25.4	0.7	2.7	chr19	56885548	56885693	(1731923)	+	Charlie2a	DNA/hAT-Charlie	180	322	(2539)	1906661
3193	12.3	6.6	9.5	chr19	57903856	57904466	(713150)	+	LTR14B	LTR/ERVK	17	608	(0)	1908520
854	17.1	0.0	0.0	chr19	58304156	58304284	(313332)	C	FLAM_C	SINE/Alu	(14)	129	1	1909306
13	21.7	4.7	6.7	chr19	58408437	58408521	(209095)	+	(CAACGCC)n	Simple_repeat	1	89	(0)	1909481
1064	27.5	1.4	2.1	chr2	109138	109419	(242084110)	C	L1MA4A	LINE/L1	(6362)	487	208	1910917
30	8.9	2.0	0.0	chr2	109672	109720	(242083809)	+	(AAGG)n	Simple_repeat	1	50	(0)	1910919
389	28.9	13.2	4.0	chr2	365614	366092	(241827437)	C	L2	LINE/L2	(734)	2685	2156	1911182
180	26.1	0.0	0.0	chr2	1744860	1744905	(240448624)	C	MIR	SINE/MIR	(10)	252	207	1912473
438	28.9	13.6	2.0	chr2	3146404	3146604	(239046925)	+	MIR	SINE/MIR	35	262	(0)	1914128
12	22.2	0.0	7.4	chr2	8685541	8685594	(233507935)	+	(CCCCGG)n	Simple_repeat	1	54	(0)	1921733
359	19.1	6.8	0.8	chr2	10282808	10282929	(231910600)	C	LTR16D1	LTR/ERVL	(27)	648	482	1924510
536	27.3	1.8	0.6	chr2	10301387	10301552	(231891977)	+	MLT1J1	LTR/ERVL-MaLR	1	168	(276)	1924543
441	33.9	6.3	1.2	chr2	10375559	10375800	(231817729)	+	MIR	SINE/MIR	2	256	(6)	1924660
682	31.6	3.1	1.9	chr2	10452193	10452515	(231741014)	+	MARNA	DNA/TcMar-Mariner	231	557	(29)	1924780
2112	11.2	0.0	1.3	chr2	10452695	10452997	(231740532)	C	AluSz6	SINE/Alu	(13)	299	1	1924781
15	5.6	0.0	0.0	chr2	11481612	11481630	(230711899)	+	(AG)n	Simple_repeat	1	19	(0)	1926722
16	10.0	6.1	0.0	chr2	11481631	11481642	(230711887)	+	A-rich	Low_complexity	3	35	(0)	1926723
515	30.6	13.0	0.6	chr2	11590408	11590767	(230602762)	+	L2a	LINE/L2	2960	3344	(43)	1926927
493	36.2	10.1	1.1	chr2	11711523	11711874	(230481655)	+	L2c	LINE/L2	2469	2855	(564)	1927141
541	32.7	6.4	5.8	chr2	11712109	11712556	(230480973)	+	L2c	LINE/L2	2919	3391	(35)	1927141
223	20.5	17.0	0.0	chr2	11747916	11747993	(230445536)	+	MIR1_Amn	SINE/MIR	22	115	(115)	1927199
720	17.6	4.2	5.9	chr2	15287404	15287572	(226905957)	+	MER20	DNA/hAT-Charlie	1	166	(53)	1932479
334	20.1	2.5	0.0	chr2	16069435	16069508	(226124021)	C	L2b	LINE/L2	(1)	3425	3318	1933881
1203	19.2	9.9	3.4	chr2	20098548	20098689	(222094840)	C	Charlie1b	DNA/hAT-Charlie	(34)	489	339	1939749
14	9.0	4.9	7.0	chr2	20134233	20134273	(222059256)	+	GA-rich	Low_complexity	1	43	(0)	1939819
2073	20.4	15.5	5.3	chr2	20275166	20275963	(221917566)	+	L1MC5a	LINE/L1	1562	2456	(321)	1940057
4169	8.6	4.8	0.3	chr2	22550878	22551458	(219642071)	+	LTR14B	LTR/ERVK	1	608	(0)	1943206
1025	19.5	3.9	7.7	chr2	23180853	23180997	(219012532)	+	L1MEf	LINE/L1	1960	2093	(4149)	1944051
2128	16.0	7.5	0.8	chr2	23180998	23181394	(219012135)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1944056
774	24.1	9.7	2.2	chr2	23732329	23732596	(218460933)	+	L1ME3B	LINE/L1	5944	6233	(9)	1944744
814	28.1	5.4	0.4	chr2	23732837	23733083	(218460446)	+	MIR	SINE/MIR	2	261	(1)	1944745
1661	18.2	7.0	9.1	chr2	24543028	24543480	(217650049)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	15	1946341
936	32.7	9.9	4.9	chr2	24543512	24544419	(217649110)	C	L2c	LINE/L2	(92)	3295	2247	1946342
324	28.5	15.8	5.3	chr2	25141830	25142018	(217051511)	+	L1ME4a	LINE/L1	5741	5947	(177)	1947380
1287	16.1	5.0	11.5	chr2	25142019	25142160	(217051369)	+	AluJo	SINE/Alu	2	131	(181)	1947381
2411	9.4	0.7	0.0	chr2	25363088	25363395	(216830134)	+	AluSg	SINE/Alu	1	310	(0)	1947805
1096	29.6	10.0	3.9	chr2	25547589	25548469	(216645060)	C	L1MEh	LINE/L1	(2417)	3729	2789	1948118
1199	25.2	5.0	1.7	chr2	25548481	25548872	(216644657)	C	L2a	LINE/L2	(303)	3123	2716	1948119
2745	21.8	9.6	2.0	chr2	25832618	25833316	(216360213)	+	L1MD2	LINE/L1	5966	6723	(27)	1948646
12	23.9	0.0	2.4	chr2	26173529	26173569	(216019960)	+	(ACAGGC)n	Simple_repeat	1	41	(0)	1949478
294	33.0	2.9	0.0	chr2	27351675	27351774	(214841755)	C	LTR67B	LTR/ERVL	(460)	160	58	1951645
216	32.3	16.8	1.5	chr2	27351926	27352267	(214841262)	+	L2	LINE/L2	879	1283	(2136)	1951646
766	23.2	10.4	1.7	chr2	28750539	28750775	(213442754)	+	MIR	SINE/MIR	3	262	(0)	1954157
208	34.4	8.1	0.8	chr2	28750979	28751104	(213442425)	C	L2c	LINE/L2	(45)	3342	3207	1954158
296	30.1	6.2	10.9	chr2	30449999	30450218	(211743311)	C	L2c	LINE/L2	(0)	3387	3179	1957036
1964	18.4	4.8	2.4	chr2	30502371	30502821	(211690708)	C	L1MB8	LINE/L1	(16)	6162	5701	1957144
15	5.6	0.0	0.0	chr2	30798920	30798938	(211394591)	+	(TG)n	Simple_repeat	1	19	(0)	1957562
24	30.8	2.0	5.9	chr2	30799076	30799224	(211394305)	+	A-rich	Low_complexity	1	152	(0)	1957563
595	31.8	6.6	2.0	chr2	31735568	31735811	(210457718)	C	MIR	SINE/MIR	(5)	257	2	1958821
2576	13.8	3.3	0.2	chr2	32034220	32034632	(210158897)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1959358
1143	27.1	7.1	4.7	chr2	32034633	32034715	(210158814)	+	L1MEc	LINE/L1	955	1052	(5817)	1959357
12	21.7	0.0	0.0	chr2	32039562	32039593	(210153936)	+	(CCCCGA)n	Simple_repeat	1	32	(0)	1959375
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
3998	22.9	8.6	3.5	chr2	35033748	35035285	(207158244)	C	MER52A	LTR/ERV1	(0)	1755	1	1964330
2070	12.0	6.7	1.7	chr2	39845042	39845397	(202348132)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1971819
251	24.4	3.4	4.4	chr2	39845721	39845810	(202347719)	+	LTR81AB	LTR/Gypsy	1075	1163	(187)	1971817
4121	6.4	6.9	3.4	chr2	41209969	41210554	(200982975)	+	LTR14B	LTR/ERVK	1	608	(0)	1973665
990	13.7	4.8	5.2	chr2	41210555	41210586	(200982943)	C	L1MA6	LINE/L1	(941)	5202	5171	1973664
15	21.3	0.0	2.5	chr2	43160068	43160107	(199033422)	+	(CCT)n	Simple_repeat	1	40	(0)	1977003
2334	9.1	0.0	0.0	chr2	43160123	43160419	(199033110)	C	AluSc8	SINE/Alu	(14)	297	1	1977004
704	15.3	0.0	0.0	chr2	46492276	46492386	(195701143)	C	AluJb	SINE/Alu	(0)	312	202	1982341
202	22.9	2.0	0.0	chr2	46720679	46720726	(195472803)	C	MIR3	SINE/MIR	(48)	160	112	1982695
18	4.2	0.0	0.0	chr2	47002982	47003006	(195190523)	+	(TGC)n	Simple_repeat	1	25	(0)	1983231
18	7.5	0.0	0.0	chr2	47186656	47186683	(195006846)	+	(TGC)n	Simple_repeat	1	28	(0)	1983501
723	19.6	1.3	5.1	chr2	47768493	47768650	(194424879)	+	FAM	SINE/Alu	7	158	(27)	1984758
3336	21.3	8.2	3.0	chr2	48047084	48047211	(194146318)	+	ERVL-E-int	LTR/ERVL	5540	5667	(0)	1985287
2363	20.0	14.9	0.9	chr2	48047216	48047467	(194146062)	+	MLT2F	LTR/ERVL	5	316	(347)	1985287
54	3.7	0.0	0.0	chr2	48047468	48047522	(194146007)	+	(GT)n	Simple_repeat	1	55	(0)	1985290
2363	20.0	14.9	0.9	chr2	48047523	48047835	(194145694)	+	MLT2F	LTR/ERVL	317	663	(0)	1985287
24	12.3	2.3	0.0	chr2	48440801	48440844	(193752685)	+	(GGC)n	Simple_repeat	1	45	(0)	1985972
21694	8.3	0.6	0.2	chr2	53663033	53667679	(188525850)	+	L1PA7	LINE/L1	1511	6153	(1)	1992939
865	29.4	6.6	6.6	chr2	55482193	55482632	(186710897)	C	MLT1K	LTR/ERVL-MaLR	(10)	585	146	1995982
836	19.9	0.0	0.0	chr2	55482706	55482836	(186710693)	+	FLAM_C	SINE/Alu	1	131	(12)	1995983
463	26.4	3.7	1.3	chr2	58969042	58969198	(183224331)	+	Tigger16a	DNA/TcMar-Tigger	797	957	(0)	2000504
2508	6.6	0.7	0.0	chr2	61764884	61765188	(180428341)	C	AluSx	SINE/Alu	(5)	307	1	2005141
1470	17.6	7.2	0.0	chr2	62402128	62402445	(179791084)	+	L1MC4a	LINE/L1	7548	7871	(11)	2006459
2268	10.6	0.0	0.0	chr2	63021772	63022064	(179171465)	C	AluSx3	SINE/Alu	(17)	294	2	2007333
8967	13.0	6.5	1.2	chr2	63986102	63988443	(178205086)	C	L1MA3	LINE/L1	(118)	6187	3708	2008640
17	9.1	0.0	0.0	chr2	64018742	64018765	(178174764)	+	(A)n	Simple_repeat	1	24	(0)	2008680
16	21.0	4.7	3.0	chr2	64019027	64019090	(178174439)	+	(CGGCGCC)n	Simple_repeat	1	67	(0)	2008681
21	29.5	2.6	0.0	chr2	64019220	64019297	(178174232)	+	(CCG)n	Simple_repeat	1	80	(0)	2008682
13	7.5	3.1	6.1	chr2	64019442	64019473	(178174056)	+	(GCCGG)n	Simple_repeat	1	33	(0)	2008683
252	31.2	19.3	2.7	chr2	65465771	65466136	(176727393)	C	L2b	LINE/L2	(22)	3353	2913	2011307
233	26.2	7.0	10.1	chr2	65466158	65466218	(176727311)	C	MER5B	DNA/hAT-Charlie	(62)	116	63	2011308
2250	9.9	0.3	3.5	chr2	65466219	65466532	(176726997)	C	AluSx	SINE/Alu	(8)	304	1	2011309
839	17.6	2.1	1.4	chr2	67451913	67452054	(174741475)	C	FRAM	SINE/Alu	(33)	143	1	2014110
948	30.7	5.4	0.9	chr2	67452144	67452478	(174741051)	+	L2	LINE/L2	1817	2167	(1252)	2014111
2354	11.4	0.3	0.0	chr2	67452482	67452787	(174740742)	C	AluSp	SINE/Alu	(6)	307	1	2014112
1334	23.5	11.7	1.1	chr2	68823189	68823806	(173369723)	C	L2a	LINE/L2	(0)	3426	2722	2016130
250	28.6	7.9	0.0	chr2	68823816	68823920	(173369609)	C	MamRep434	DNA/TcMar-Tigger	(221)	205	92	2016131
14	14.1	0.0	3.0	chr2	70302019	70302051	(171891478)	+	(CCGCG)n	Simple_repeat	1	33	(0)	2018832
1061	20.5	12.6	7.7	chr2	70302275	70302362	(171891167)	C	L1ME2	LINE/L1	(0)	6179	6067	2018833
2753	13.4	6.8	7.0	chr2	70405043	70405571	(171787958)	+	LTR14B	LTR/ERVK	17	544	(64)	2019047
14417	7.3	1.8	2.3	chr2	70405572	70406569	(171786960)	+	L1PB1	LINE/L1	4086	5088	(1774)	2019046
41	0.0	0.0	0.0	chr2	72451655	72451689	(169741840)	+	(TG)n	Simple_repeat	1	35	(0)	2022044
219	23.1	1.9	1.9	chr2	72841365	72841417	(169352112)	+	L2c	LINE/L2	3259	3311	(76)	2022663
9534	9.1	10.5	0.1	chr2	77590309	77591721	(164601808)	+	LTR12C	LTR/ERV1	3	1579	(0)	2029864
3789	10.5	0.8	0.0	chr2	84470246	84470759	(157722770)	C	MER41A	LTR/ERV1	(0)	554	37	2039033
2216	7.7	9.6	4.4	chr2	84470760	84471171	(157722358)	C	LTR14B	LTR/ERVK	(0)	608	1	2039034
42370	5.8	2.0	0.2	chr2	84471381	84477034	(157716495)	C	HERVK14-int	LTR/ERVK	(195)	5901	1	2039036
1919	8.6	10.7	4.8	chr2	84477047	84477426	(157716103)	C	LTR14B	LTR/ERVK	(30)	578	1	2039036
24	15.5	0.0	0.0	chr2	85014703	85014747	(157178782)	+	(GCGT)n	Simple_repeat	1	45	(0)	2039931
740	10.6	0.0	2.1	chr2	85014748	85014841	(157178688)	C	AluJo	SINE/Alu	(188)	124	33	2039932
184	22.2	0.0	2.2	chr2	85148468	85148513	(157045016)	+	MIR1_Amn	SINE/MIR	116	160	(70)	2040210
359	18.5	1.5	0.0	chr2	85156814	85156878	(157036651)	+	MER20	DNA/hAT-Charlie	6	71	(148)	2040224
846	16.6	3.5	4.1	chr2	85156889	85157058	(157036471)	+	MER20	DNA/hAT-Charlie	51	219	(0)	2040225
17	29.5	1.7	1.6	chr2	85157062	85157121	(157036408)	+	(TA)n	Simple_repeat	1	61	(0)	2040226
431	25.6	5.0	1.7	chr2	85157122	85157295	(157036234)	C	MIR3	SINE/MIR	(27)	181	3	2040227
1804	24.7	6.7	12.0	chr2	85913712	85913787	(156279742)	+	MER21C	LTR/ERVL	752	825	(113)	2041728
289	18.5	23.4	7.4	chr2	85913963	85914125	(156279404)	C	LTR88b	LTR/Gypsy?	(0)	837	641	2041731
1159	26.1	12.4	4.5	chr2	85914168	85914194	(156279335)	+	LTR33	LTR/ERVL	1	27	(488)	2041732
2300	16.8	0.8	3.9	chr2	85914195	85914603	(156278926)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2041733
4211	14.1	2.2	0.4	chr2	85939392	85940140	(156253389)	+	L1M4	LINE/L1	4666	5431	(743)	2041787
1184	22.1	10.8	2.7	chr2	85940140	85940506	(156253023)	+	L1M5	LINE/L1	4838	5237	(909)	2041788
3770	25.9	8.5	7.2	chr2	86185188	86186320	(156007209)	+	MLT1G3-int	LTR/ERVL-MaLR	330	1488	(1)	2042199
1361	27.4	5.3	1.7	chr2	86186329	86186758	(156006771)	+	MLT1G3	LTR/ERVL-MaLR	18	454	(115)	2042199
299	32.1	7.5	1.2	chr2	88201054	88201214	(153992315)	C	LTR16A	LTR/ERVL	(248)	203	32	2045468
2331	11.6	0.0	0.3	chr2	88540715	88541024	(153652505)	+	AluSq2	SINE/Alu	5	313	(0)	2046245
2821	13.3	4.9	0.0	chr2	88541035	88541462	(153652067)	C	MSTB2	LTR/ERVL-MaLR	(5)	452	3	2046246
820	13.2	0.8	2.9	chr2	88541484	88541619	(153651910)	+	AluJo	SINE/Alu	1	133	(179)	2046247
4564	7.9	3.8	0.5	chr2	89225178	89225762	(152967767)	C	LTR14B	LTR/ERVK	(0)	608	4	2047135
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
344	30.7	7.0	1.0	chr2	95327080	95327327	(146866202)	C	ERVL-B4-int	LTR/ERVL	(3958)	1696	1423	2050514
46	23.8	0.9	0.0	chr2	95327362	95327475	(146866054)	+	(CACACA)n	Simple_repeat	1	115	(0)	2050515
15	22.9	2.0	2.0	chr2	96265749	96265817	(145927712)	+	G-rich	Low_complexity	1	69	(0)	2051856
18	22.1	2.1	0.0	chr2	96266002	96266048	(145927481)	+	(TCC)n	Simple_repeat	1	48	(0)	2051857
240	30.3	7.8	5.5	chr2	96969607	96969777	(145223752)	C	L2c	LINE/L2	(2)	3385	3180	2053090
13	4.1	8.0	0.0	chr2	96970006	96970030	(145223499)	+	(AAC)n	Simple_repeat	1	27	(0)	2053091
2197	14.5	2.4	5.1	chr2	98466919	98467347	(143726182)	C	MSTB1	LTR/ERVL-MaLR	(2)	430	14	2055055
12	18.3	4.3	4.1	chr2	98730510	98730556	(143462973)	+	(GCCCCT)n	Simple_repeat	1	49	(0)	2055398
17	26.3	3.0	1.5	chr2	98730782	98730847	(143462682)	+	(CGCCCC)n	Simple_repeat	1	68	(0)	2055399
2307	6.2	0.0	1.4	chr2	101719730	101720017	(140473512)	+	AluSg7	SINE/Alu	1	284	(25)	2060123
14	18.3	2.7	0.0	chr2	102736724	102736760	(139456769)	+	(TCCTGTC)n	Simple_repeat	1	38	(0)	2061466
17	13.9	5.0	0.0	chr2	104430078	104430117	(137763412)	+	A-rich	Low_complexity	1	42	(0)	2063530
1183	19.7	12.2	0.0	chr2	105202659	105202968	(136990561)	+	MER97a	DNA/hAT-Tip100	534	886	(4)	2064565
479	26.4	4.0	0.7	chr2	105202974	105203118	(136990411)	C	L2a	LINE/L2	(1405)	2014	1865	2064556
243	22.4	9.7	3.0	chr2	105203141	105203207	(136990322)	+	AluJr	SINE/Alu	54	125	(187)	2064566
1682	16.8	0.3	1.8	chr2	105203229	105203513	(136990016)	+	AluJo	SINE/Alu	20	300	(12)	2064567
3849	10.7	1.7	5.1	chr2	105989643	105990255	(136203274)	+	LTR14B	LTR/ERVK	17	608	(0)	2065757
9170	9.1	0.1	0.2	chr2	105990256	105991451	(136202078)	+	HERVK14-int	LTR/ERVK	1	1195	(4901)	2065757
3914	11.8	1.1	4.9	chr2	105994179	105994810	(136198719)	+	LTR14B	LTR/ERVK	1	608	(0)	2065759
1084	26.8	9.6	6.3	chr2	105994813	105995254	(136198275)	+	MER21C	LTR/ERVL	374	831	(107)	2065756
2081	11.3	1.0	4.2	chr2	106241473	106241618	(135951911)	+	AluSc	SINE/Alu	1	144	(165)	2066071
4086	10.5	1.3	4.9	chr2	106241619	106242247	(135951282)	C	LTR14B	LTR/ERVK	(0)	608	3	2066072
2166	11.2	0.0	4.2	chr2	107909022	107909167	(134284362)	+	AluSc	SINE/Alu	1	144	(165)	2068563
3934	11.4	1.3	4.9	chr2	107909168	107909796	(134283733)	C	LTR14B	LTR/ERVK	(0)	608	3	2068564
14	8.3	0.0	3.6	chr2	107941743	107941770	(134251759)	+	(AATAA)n	Simple_repeat	1	28	(0)	2068604
330	36.2	5.9	6.8	chr2	107941780	107942173	(134251356)	+	L2c	LINE/L2	2998	3387	(0)	2068605
185	31.1	6.2	3.2	chr2	108450016	108450108	(133743421)	+	MIR3	SINE/MIR	111	206	(2)	2069254
1317	23.2	8.8	2.8	chr2	108835779	108836141	(133357388)	C	MSTD	LTR/ERVL-MaLR	(8)	388	2	2069888
2487	16.6	2.6	0.7	chr2	108836143	108836592	(133356937)	C	L1MB2	LINE/L1	(147)	6024	5566	2069887
1854	15.9	0.6	3.4	chr2	108842018	108842337	(133351192)	C	AluJr	SINE/Alu	(0)	312	2	2069897
1972	23.2	5.9	2.9	chr2	108842338	108842843	(133350686)	C	MER54A	LTR/ERVL	(172)	472	1	2069898
3021	20.0	5.4	6.5	chr2	110167110	110167916	(132025613)	+	MER21C	LTR/ERVL	9	898	(40)	2071835
415	17.1	1.4	0.0	chr2	110167934	110168003	(132025526)	+	MER33	DNA/hAT-Charlie	254	324	(0)	2071836
282	21.9	3.0	0.0	chr2	111679213	111679276	(130514253)	+	L2a	LINE/L2	3309	3374	(52)	2073859
1723	14.0	4.6	0.4	chr2	118015013	118015283	(124178246)	+	AluJb	SINE/Alu	4	286	(26)	2083041
20	22.4	1.3	5.3	chr2	118185529	118185603	(124007926)	+	G-rich	Low_complexity	1	76	(0)	2083311
347	22.4	14.1	6.6	chr2	118818946	118819141	(123374388)	C	MamRep1879	DNA/hAT-Tip100?	(0)	216	4	2084302
1264	23.7	14.2	1.8	chr2	119696435	119696885	(122496644)	C	L2a	LINE/L2	(1)	3425	2910	2085781
277	32.9	0.0	0.0	chr2	119737615	119737690	(122455839)	C	MER5B	DNA/hAT-Charlie	(102)	76	1	2085870
244	27.1	20.4	0.0	chr2	120262887	120263030	(121930499)	C	MIR3	SINE/MIR	(50)	218	36	2086670
1607	16.2	4.7	0.3	chr2	120263173	120263455	(121930074)	C	AluJb	SINE/Alu	(14)	298	3	2086671
261	28.9	20.0	1.6	chr2	120274758	120275066	(121918463)	C	L1MEd	LINE/L1	(6164)	922	543	2086700
519	28.6	13.2	10.5	chr2	120275078	120275424	(121918105)	C	L1MEd	LINE/L1	(6606)	480	100	2086700
265	29.2	1.4	0.0	chr2	120365506	120365577	(121827952)	+	MIR	SINE/MIR	115	187	(75)	2086839
249	24.4	0.0	11.3	chr2	120730335	120730358	(121463171)	+	L2c	LINE/L2	3302	3325	(62)	2087483
2205	8.3	0.0	2.2	chr2	120730359	120730670	(121462859)	C	AluSq4	SINE/Alu	(5)	306	2	2087484
516	28.4	5.3	4.9	chr2	120815688	120815931	(121377598)	C	MLT2F	LTR/ERVL	(2)	661	417	2087602
809	28.4	10.5	2.1	chr2	121047591	121047964	(121145565)	+	MLT1I	LTR/ERVL-MaLR	3	411	(0)	2087957
3163	14.5	7.3	6.9	chr2	121215521	121215657	(120977872)	+	L1MB3	LINE/L1	5828	5997	(186)	2088289
1890	15.8	9.4	0.5	chr2	121215658	121216044	(120977485)	+	MSTB	LTR/ERVL-MaLR	1	425	(1)	2088291
226	20.8	2.0	7.7	chr2	121891552	121891603	(120301926)	C	MLT1O	LTR/ERVL-MaLR	(223)	319	271	2089546
3769	18.3	7.5	2.6	chr2	127403772	127404662	(114788867)	+	L1MC4a	LINE/L1	6742	7679	(203)	2097387
581	26.6	6.9	14.9	chr2	127404878	127405319	(114788210)	C	MLT1L	LTR/ERVL-MaLR	(205)	405	2	2097388
15	11.7	0.0	0.0	chr2	127637668	127637695	(114555834)	+	(ACCCC)n	Simple_repeat	1	28	(0)	2097755
21	15.5	5.9	0.0	chr2	127637878	127637928	(114555601)	+	(CTTC)n	Simple_repeat	1	54	(0)	2097756
14	24.6	5.1	1.6	chr2	128027166	128027224	(114166305)	+	(CGG)n	Simple_repeat	1	62	(0)	2098507
5359	15.5	3.9	0.6	chr2	129718301	129719647	(112473882)	+	L1MA7	LINE/L1	4786	6181	(110)	2100768
510	6.3	0.0	0.0	chr2	129719648	129719710	(112473819)	+	AluSp	SINE/Alu	243	305	(8)	2100769
1987	13.2	1.6	0.3	chr2	130253318	130253621	(111939908)	C	AluSq2	SINE/Alu	(5)	308	1	2101570
2026	12.6	0.2	0.1	chr2	131637203	131637643	(110555886)	C	L1P2	LINE/L1	(3745)	2574	2149	2103560
1127	11.6	0.3	0.0	chr2	132286523	132287784	(109905745)	C	ACRO1	Satellite/acro	(55)	1265	1	2104358
1917	13.8	2.4	0.0	chr2	134917500	134917790	(107275739)	C	AluJr	SINE/Alu	(14)	298	1	2108146
849	24.3	11.8	0.7	chr2	134999325	134999602	(107193927)	C	MER5C	DNA/hAT-Charlie	(0)	313	1	2108264
6865	16.5	4.7	2.1	chr2	135072211	135074671	(107118858)	C	MER83B-int	LTR/ERV1	(173)	4707	12	2108414
11	29.4	3.7	0.0	chr2	135565634	135565687	(106627842)	+	A-rich	Low_complexity	1	56	(0)	2109221
16	13.2	0.0	0.0	chr2	135565708	135565732	(106627797)	+	(T)n	Simple_repeat	1	25	(0)	2109222
2209	5.3	12.8	0.0	chr2	135565786	135566085	(106627444)	C	LTR14A	LTR/ERVK	(0)	344	1	2109223
3123	18.1	9.7	0.3	chr2	135887320	135887945	(106305584)	C	MER76	LTR/ERVL	(0)	691	1	2109805
1079	28.1	5.5	4.8	chr2	135887946	135888101	(106305428)	C	ERV3-16A3_I-int	LTR/ERVL	(890)	4336	4174	2109802
2121	8.0	1.5	18.1	chr2	135888102	135888515	(106305014)	C	LTR14A	LTR/ERVK	(0)	344	1	2109806
718	26.4	7.6	5.0	chr2	135888516	135888641	(106304888)	C	ERV3-16A3_I-int	LTR/ERVL	(1053)	4173	4050	2109802
2359	13.3	1.3	0.8	chr2	144167425	144167803	(98025726)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2121025
25	22.5	2.9	1.4	chr2	144516344	144516412	(97677117)	+	(TC)n	Simple_repeat	1	71	(0)	2121493
2083	16.7	1.9	8.0	chr2	145273728	145274164	(96919365)	C	MSTB	LTR/ERVL-MaLR	(2)	424	15	2122470
2850	28.4	6.4	4.4	chr2	145274189	145275292	(96918237)	+	L1ME1	LINE/L1	2911	4065	(2254)	2122467
1747	18.7	0.0	1.6	chr2	148613520	148613824	(93579705)	+	AluJr4	SINE/Alu	1	300	(12)	2126877
462	28.9	15.0	6.0	chr2	148613825	148613978	(93579551)	+	MLT1M	LTR/ERVL-MaLR	106	283	(389)	2126876
2058	17.6	7.9	2.2	chr2	148613979	148614385	(93579144)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	2126878
695	14.4	5.3	0.8	chr2	149342194	149342319	(92851210)	C	MSTB	LTR/ERVL-MaLR	(294)	132	1	2127942
1750	17.0	7.8	2.4	chr2	150799222	150799595	(91393934)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2129884
227	33.3	8.3	1.0	chr2	154953729	154953828	(87239701)	C	L2a	LINE/L2	(44)	3382	3275	2135611
15	31.1	1.4	2.7	chr2	158407003	158407074	(83786455)	+	(TCTCTC)n	Simple_repeat	1	73	(0)	2140106
604	32.2	10.2	7.5	chr2	158720084	158720859	(83472670)	C	LTR85c	LTR/Gypsy?	(13)	810	11	2140458
259	27.3	10.0	1.0	chr2	159214186	159214285	(82979244)	C	Charlie15b	DNA/hAT-Charlie	(920)	141	32	2141266
255	24.7	13.1	6.3	chr2	159214290	159214418	(82979111)	C	MIR3	SINE/MIR	(53)	155	15	2141268
200	27.2	5.8	4.7	chr2	160113605	160113689	(82079840)	C	MER5A	DNA/hAT-Charlie	(24)	165	69	2142642
2029	16.2	3.0	2.5	chr2	160983963	160984323	(81209206)	+	THE1B	LTR/ERVL-MaLR	1	363	(1)	2143808
501	30.8	13.8	7.0	chr2	160984324	160984687	(81208842)	+	L2c	LINE/L2	2992	3380	(7)	2143807
22060	8.8	1.0	2.2	chr2	161010002	161016450	(81177079)	+	L1PA7	LINE/L1	6	6469	(0)	2143843
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
477	31.2	6.5	2.6	chr2	161692425	161692691	(80500838)	+	MamRep605	LTR?	19	296	(553)	2144745
662	15.7	0.0	0.0	chr2	167662335	167662442	(74531087)	C	L1MC1	LINE/L1	(18)	6315	6208	2152496
1226	25.7	8.6	1.2	chr2	167662527	167662936	(74530593)	+	L2a	LINE/L2	2699	3142	(284)	2152497
1585	17.7	7.9	4.8	chr2	167716327	167717064	(74476465)	C	L1MDa	LINE/L1	(3640)	2897	2128	2152555
439	23.3	3.0	1.5	chr2	169345498	169345628	(72847901)	+	L1MD2	LINE/L1	6015	6147	(212)	2154810
16	0.0	0.0	0.0	chr2	169345755	169345771	(72847758)	+	(A)n	Simple_repeat	1	17	(0)	2154811
30	0.0	0.0	0.0	chr2	169345859	169345887	(72847642)	+	(AAAAC)n	Simple_repeat	1	29	(0)	2154812
359	33.7	9.4	6.5	chr2	169886639	169886959	(72306570)	C	L3	LINE/CR1	(550)	3549	3219	2155813
219	30.0	4.1	0.0	chr2	169886962	169887031	(72306498)	C	L3	LINE/CR1	(1013)	3086	3014	2155813
541	30.9	12.4	1.7	chr2	172028027	172028474	(70165055)	C	L2a	LINE/L2	(94)	3332	2835	2159487
219	33.3	2.7	3.6	chr2	172822503	172822614	(69370915)	+	AmnSINE1	SINE/5S-Deu-L2	17	127	(448)	2160738
363	29.1	4.2	6.7	chr2	174062292	174062486	(68131043)	C	MLT1L	LTR/ERVL-MaLR	(300)	310	121	2162652
1222	12.5	4.6	2.8	chr2	174190984	174191238	(68002291)	+	L1MA8	LINE/L1	6015	6274	(17)	2162841
1874	14.5	0.3	5.2	chr2	174191439	174191762	(68001767)	C	AluJr	SINE/Alu	(4)	308	1	2162842
19	16.5	2.0	3.9	chr2	174332446	174332496	(67861033)	+	G-rich	Low_complexity	1	52	(0)	2163099
31	7.3	3.2	4.6	chr2	174332970	174333032	(67860497)	+	(CTTCT)n	Simple_repeat	1	65	(0)	2163100
16	21.6	0.0	0.0	chr2	176108170	176108201	(66085328)	+	G-rich	Low_complexity	1	32	(0)	2165668
18	16.9	0.0	5.8	chr2	177212582	177212633	(64980896)	+	(CGCCCGC)n	Simple_repeat	1	52	(0)	2167291
2093	17.3	7.5	2.5	chr2	177407306	177407709	(64785820)	C	MSTA	LTR/ERVL-MaLR	(0)	428	3	2167627
1389	20.8	6.0	2.8	chr2	177407793	177408080	(64785449)	C	AluJr4	SINE/Alu	(13)	299	2	2167628
482	30.8	4.0	0.6	chr2	177545833	177546002	(64647527)	C	MIRb	SINE/MIR	(84)	184	9	2167774
3707	8.1	8.6	4.3	chr2	177546092	177546669	(64646860)	C	LTR14B	LTR/ERVK	(0)	608	4	2167775
2917	1.6	0.0	0.0	chr2	179836509	179836817	(62356712)	C	AluYb8	SINE/Alu	(9)	309	1	2170699
2415	10.0	0.0	1.0	chr2	181401597	181401905	(60791624)	+	AluSx	SINE/Alu	1	306	(6)	2172697
635	36.3	1.9	0.3	chr2	181689659	181690020	(60503509)	+	ERVL-B4-int	LTR/ERVL	866	1233	(4434)	2173008
882	31.1	6.2	0.8	chr2	181690370	181690738	(60502791)	+	ERVL-B4-int	LTR/ERVL	1727	2116	(3598)	2173008
226	25.8	0.0	0.0	chr2	182122635	182122696	(60070833)	+	L1MC5a	LINE/L1	2557	2618	(159)	2173547
250	23.2	0.0	0.0	chr2	182122770	182122825	(60070704)	C	L1MC5a	LINE/L1	(478)	2299	2244	2173548
16256	7.4	0.5	0.4	chr2	182122863	182124304	(60069225)	C	L1PA7	LINE/L1	(7)	6147	4697	2173549
6177	13.5	2.6	1.4	chr2	182695706	182696805	(59496724)	+	L1MC1	LINE/L1	5188	6333	(0)	2174347
708	32.3	10.9	5.7	chr2	187077697	187078739	(55114790)	C	LTR78	LTR/ERV1	(0)	1304	200	2179939
2528	16.4	1.2	0.7	chr2	188378449	188378865	(53814664)	C	MSTB1	LTR/ERVL-MaLR	(13)	419	1	2181592
2235	7.7	2.7	0.3	chr2	189503146	189503430	(52690099)	C	AluSc8	SINE/Alu	(19)	292	1	2182929
1129	29.6	7.0	1.1	chr2	189673196	189673667	(52519862)	+	L2b	LINE/L2	1998	2499	(920)	2183193
635	34.8	8.8	3.0	chr2	189673841	189674276	(52519253)	+	L2b	LINE/L2	2912	3375	(0)	2183193
494	28.4	13.1	1.3	chr2	190972061	190972295	(51221234)	+	MIRb	SINE/MIR	2	268	(0)	2185182
20	11.6	0.0	0.0	chr2	190972718	190972746	(51220783)	+	(T)n	Simple_repeat	1	29	(0)	2185183
4828	13.8	0.8	0.5	chr2	194366379	194367140	(47826389)	+	L1PA16	LINE/L1	5400	6163	(3)	2189586
4012	10.9	0.5	4.1	chr2	194367168	194367798	(47825731)	C	LTR14B	LTR/ERVK	(0)	608	1	2189587
260	28.3	7.0	7.8	chr2	196205197	196205311	(45988218)	C	MIR1_Amn	SINE/MIR	(83)	147	28	2192053
490	26.1	4.7	3.0	chr2	196205645	196205810	(45987719)	C	MER5A	DNA/hAT-Charlie	(13)	176	8	2192054
217	28.1	7.2	2.9	chr2	196205876	196206003	(45987526)	C	MIR	SINE/MIR	(35)	195	58	2192055
391	25.2	5.4	1.6	chr2	197478557	197478681	(44714848)	+	MLT1L	LTR/ERVL-MaLR	461	590	(20)	2194122
849	23.5	3.2	0.5	chr2	197478683	197478896	(44714633)	C	HAL1	LINE/L1	(624)	1883	1664	2194123
2240	8.0	2.4	0.3	chr2	197478897	197479185	(44714344)	C	AluSx3	SINE/Alu	(14)	297	3	2194124
11145	10.3	1.0	1.1	chr2	197590543	197592121	(44601408)	C	LTR12C	LTR/ERV1	(0)	1579	3	2194333
468	30.1	8.1	6.3	chr2	198210244	198210605	(43982924)	C	HAL1	LINE/L1	(121)	2386	2005	2195191
853	20.8	5.3	13.6	chr2	200161407	200161769	(42031760)	C	MER21B	LTR/ERVL	(485)	453	25	2197910
2862	0.7	0.0	0.0	chr2	200795971	200796273	(41397256)	+	AluYa5	SINE/Alu	1	303	(8)	2198870
1761	19.7	0.0	9.0	chr2	200796274	200796588	(41396941)	+	MLT1A0	LTR/ERVL-MaLR	85	365	(0)	2198869
1153	24.9	8.1	7.9	chr2	202866067	202866119	(39327410)	+	L1MEc	LINE/L1	4996	5041	(1278)	2202812
2226	13.0	13.0	0.3	chr2	202866120	202866489	(39327040)	+	MSTB1	LTR/ERVL-MaLR	5	428	(4)	2202827
1153	24.9	8.1	7.9	chr2	202866490	202866665	(39326864)	+	L1MEc	LINE/L1	5042	5210	(1109)	2202812
2227	18.8	3.7	1.4	chr2	205841604	205842025	(36351504)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2207472
9869	20.1	7.5	7.3	chr2	205842026	205842351	(36351178)	+	L1MB4	LINE/L1	5830	6152	(854)	2207470
255	18.6	1.5	0.0	chr2	207636249	207636316	(34557213)	C	MIRb	SINE/MIR	(90)	178	106	2210364
2101	14.1	0.0	0.3	chr2	207636482	207636794	(34556735)	+	AluJo	SINE/Alu	1	312	(0)	2210365
12	27.2	5.3	0.0	chr2	207924881	207924937	(34268592)	+	GA-rich	Low_complexity	1	60	(0)	2210963
21	10.8	0.0	0.0	chr2	207925130	207925159	(34268370)	+	(T)n	Simple_repeat	1	30	(0)	2210964
183	25.0	26.2	0.0	chr2	207925451	207925554	(34267975)	C	MIR	SINE/MIR	(1)	261	121	2210965
403	20.7	13.0	5.4	chr2	208175305	208175328	(34018201)	+	Charlie30a	DNA/hAT-Charlie	652	675	(116)	2211471
378	34.8	2.9	1.2	chr2	208265687	208265903	(33927626)	C	MIR	SINE/MIR	(23)	239	26	2211619
3958	11.6	0.5	4.9	chr2	213660440	213661073	(28532456)	+	LTR14B	LTR/ERVK	3	608	(0)	2218510
2342	11.4	0.0	0.0	chr2	215840526	215840806	(26352723)	C	AluSx1	SINE/Alu	(31)	281	1	2221712
11	24.4	0.0	0.0	chr2	215840944	215840977	(26352552)	+	A-rich	Low_complexity	1	34	(0)	2221713
14	15.1	5.4	0.0	chr2	215841091	215841130	(26352399)	+	(TTTTG)n	Simple_repeat	1	42	(0)	2221714
579	30.9	3.7	9.8	chr2	218185725	218186195	(24007334)	+	L2a	LINE/L2	2976	3417	(9)	2225590
16	26.3	0.0	1.9	chr2	221374932	221374984	(20818545)	+	A-rich	Low_complexity	1	53	(0)	2230980
717	34.2	9.0	0.9	chr2	221375025	221375475	(20818054)	C	L2	LINE/L2	(671)	2748	2258	2230981
944	31.9	4.1	4.4	chr2	222177788	222178050	(20015479)	C	L2a	LINE/L2	(333)	3093	2861	2232228
31	3.3	0.0	0.0	chr2	222178051	222178081	(20015448)	+	(AC)n	Simple_repeat	1	31	(0)	2232229
944	32.3	5.6	12.0	chr2	222178082	222178561	(20014968)	C	L2a	LINE/L2	(559)	2860	2400	2232228
1909	19.0	0.0	4.8	chr2	222193652	222194044	(19999485)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	2232266
551	28.4	13.5	3.6	chr2	222194087	222194528	(19999001)	+	LTR33	LTR/ERVL	23	509	(6)	2232267
3044	14.7	5.1	0.2	chr2	222810252	222810788	(19382741)	+	L1MC1	LINE/L1	5760	6324	(9)	2233247
255	17.9	0.0	0.0	chr2	223716722	223716760	(18476769)	+	tRNA-Ile-ATA	tRNA	1	39	(38)	2234703
2485	14.2	11.3	3.3	chr2	223716791	223717307	(18476222)	+	LTR6A	LTR/ERV1	1	564	(0)	2234704
2303	11.6	0.6	1.8	chr2	224636440	224636781	(17556748)	+	MER1B	DNA/hAT-Charlie	2	339	(0)	2236276
322	23.8	1.0	10.6	chr2	224636782	224636847	(17556682)	C	MLT1L	LTR/ERVL-MaLR	(54)	556	492	2236275
1771	14.2	0.3	5.5	chr2	224664127	224664437	(17529092)	C	AluJo	SINE/Alu	(17)	295	1	2236329
773	33.3	2.6	0.8	chr2	224664593	224664858	(17528671)	C	MER115	DNA/hAT-Tip100	(422)	271	1	2236328
239	32.2	3.2	0.8	chr2	230684461	230684582	(11508947)	C	MLT1J	LTR/ERVL-MaLR	(250)	194	70	2245518
46	0.0	0.0	0.0	chr2	230684601	230684642	(11508887)	+	(TAGT)n	Simple_repeat	1	42	(0)	2245520
704	19.8	0.8	0.0	chr2	230684643	230684763	(11508766)	C	FLAM_A	SINE/Alu	(20)	122	1	2245521
277	32.6	5.3	3.3	chr2	230684820	230685003	(11508526)	+	L2a	LINE/L2	3239	3426	(0)	2245522
43	0.0	0.0	0.0	chr2	230987475	230987513	(11206016)	+	(CAGGGC)n	Simple_repeat	1	39	(0)	2246024
327	28.8	4.3	1.5	chr2	231549300	231549433	(10644096)	+	L2c	LINE/L2	3250	3387	(0)	2247104
304	29.4	8.5	1.6	chr2	231549761	231549881	(10643648)	+	HAL1ME	LINE/L1	2334	2463	(2)	2247106
185	29.8	3.4	0.0	chr2	231612392	231612448	(10581081)	+	MIRc	SINE/MIR	201	259	(9)	2247263
2137	8.4	8.3	0.0	chr2	231622050	231622335	(10571194)	C	AluSx1	SINE/Alu	(0)	312	1	2247281
363	20.9	3.2	0.0	chr2	231832547	231832635	(10360894)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
331	23.9	2.1	0.0	chr2	231832636	231832725	(10360804)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
360	23.2	2.0	2.0	chr2	231832753	231832853	(10360676)	+	MER20	DNA/hAT-Charlie	119	219	(0)	2247713
12	21.2	3.6	5.3	chr2	232363699	232363753	(9829776)	+	(CAGCTCC)n	Simple_repeat	1	57	(0)	2248537
1817	19.9	12.5	3.5	chr2	234865207	234865664	(7327865)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2252677
181	9.7	0.0	8.8	chr2	234865875	234865908	(7327621)	+	L3	LINE/CR1	1868	1898	(2201)	2252678
17	8.8	0.0	0.0	chr2	234968372	234968395	(7225134)	+	(T)n	Simple_repeat	1	24	(0)	2252849
308	38.8	7.7	1.5	chr2	234968410	234968676	(7224853)	C	L1M5	LINE/L1	(3310)	2836	2552	2252850
433	33.8	2.8	3.6	chr2	237434933	237435181	(4758348)	C	L2c	LINE/L2	(224)	3163	2917	2256345
2551	11.7	1.4	6.0	chr2	237786779	237787243	(4406286)	+	LTR14B	LTR/ERVK	166	608	(0)	2256839
1491	11.6	1.4	0.0	chr2	237787244	237787450	(4406079)	C	AluSx	SINE/Alu	(102)	210	1	2256838
400	27.6	17.3	2.5	chr2	238587241	238587485	(3606044)	C	L2a	LINE/L2	(26)	3400	3112	2258000
184	28.9	15.9	1.1	chr2	240968518	240968608	(1224921)	C	MIRc	SINE/MIR	(119)	149	43	2260550
188	26.8	6.5	4.4	chr2	241002652	241002741	(1190788)	C	MIRc	SINE/MIR	(76)	192	101	2260575
206	31.1	6.7	3.7	chr2	241002918	241003104	(1190425)	+	L2c	LINE/L2	2669	2861	(558)	2260576
2823	30.4	13.2	8.5	chr2	241018046	241019840	(1173689)	C	HERVL40-int	LTR/ERVL	(411)	5119	3245	2260592
568	26.7	10.8	0.0	chr2	241019846	241020010	(1173519)	C	MER58A	DNA/hAT-Charlie	(3)	221	37	2260594
308	31.6	11.2	1.4	chr2	241147646	241147854	(1045675)	+	HAL1ME	LINE/L1	2085	2316	(149)	2260739
1966	23.1	0.2	0.1	chr20	60221	63215	(64380952)	+	(ATTCC)n	Simple_repeat	2	3000	(0)	2262201
2123	5.5	6.3	3.1	chr20	818790	819081	(63625086)	C	AluY	SINE/Alu	(9)	302	1	2263795
76	21.7	2.2	0.5	chr20	819239	819417	(63624750)	+	(TCTC)n	Simple_repeat	1	182	(0)	2263796
412	27.6	13.7	0.9	chr20	1042851	1043067	(63401100)	C	MIRb	SINE/MIR	(6)	262	5	2264309
1046	25.7	7.8	1.1	chr20	1043269	1043615	(63400552)	C	LTR16	LTR/ERVL	(2)	436	65	2264310
547	26.4	2.2	12.8	chr20	1276388	1276661	(63167506)	+	MIRb	SINE/MIR	7	254	(14)	2264739
598	27.0	6.5	3.1	chr20	2673594	2673815	(61770352)	+	HERVL40-int	LTR/ERVL	1377	1606	(3924)	2267401
2292	10.4	0.0	0.0	chr20	2673871	2674168	(61769999)	+	AluSg	SINE/Alu	1	298	(12)	2267403
14	0.0	4.8	0.0	chr20	2814911	2814931	(61629236)	+	(CAG)n	Simple_repeat	1	22	(0)	2267644
2544	15.3	3.3	1.4	chr20	3273344	3273761	(61170406)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2268549
2506	7.0	0.0	0.0	chr20	3854887	3855184	(60588983)	C	AluSc	SINE/Alu	(7)	302	5	2269650
2296	21.3	6.3	1.0	chr20	3855190	3855764	(60588403)	C	HAL1M8	LINE/L1	(2283)	708	102	2269651
478	23.4	1.6	0.6	chr20	3871875	3872009	(60572158)	C	MIR	SINE/MIR	(0)	268	130	2269684
1872	17.2	0.7	0.0	chr20	3872158	3872441	(60571726)	+	AluJr4	SINE/Alu	1	286	(26)	2269685
549	17.8	3.3	0.8	chr20	4674030	4674148	(59770019)	+	MER3	DNA/hAT-Charlie	70	191	(18)	2271133
244	21.2	16.9	3.3	chr20	4674167	4674288	(59769879)	+	L5	LINE/RTE-X	2047	2188	(77)	2271134
276	37.0	4.9	1.7	chr20	4674329	4674504	(59769663)	+	MamSINE1	SINE/tRNA-RTE	70	251	(39)	2271135
2263	10.0	0.3	0.7	chr20	5603012	5603301	(58840866)	+	AluSg4	SINE/Alu	1	289	(21)	2272836
306	32.6	14.9	6.8	chr20	5603302	5603565	(58840602)	C	L2b	LINE/L2	(98)	3277	2973	2272834
259	20.0	0.0	0.0	chr20	8945447	8945491	(55498676)	+	L2b	LINE/L2	3312	3356	(19)	2278098
325	28.6	7.3	2.2	chr20	8945494	8945635	(55498532)	C	L2a	LINE/L2	(0)	3426	3253	2278099
547	28.8	23.7	4.0	chr20	10343471	10343874	(54100293)	+	LTR16C	LTR/ERVL	6	489	(0)	2280371
555	26.1	9.8	6.7	chr20	11791392	11791646	(52652521)	C	LTR16A1	LTR/ERVL	(190)	266	3	2282492
3131	16.1	4.8	4.6	chr20	11791707	11792313	(52651854)	+	LTR35	LTR/ERV1	1	608	(0)	2282493
2462	9.1	0.7	0.0	chr20	13395690	13395998	(51048169)	C	AluSc8	SINE/Alu	(0)	311	1	2284798
1097	24.6	15.3	5.9	chr20	16067188	16067697	(48376470)	+	MLT1G1	LTR/ERVL-MaLR	1	567	(12)	2288823
501	23.0	7.9	0.0	chr20	17505257	17505430	(46938737)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	2290984
441	21.5	5.1	1.5	chr20	17505737	17505868	(46938299)	+	MER5A	DNA/hAT-Charlie	3	139	(50)	2290985
964	26.6	12.5	2.2	chr20	17505924	17506356	(46937811)	+	MLT1E2	LTR/ERVL-MaLR	115	607	(73)	2290986
229	18.6	7.8	13.2	chr20	18674858	18674904	(45769263)	C	Helitron3Na_Mam	RC/Helitron	(339)	147	98	2293082
1964	21.2	13.7	1.5	chr20	18674905	18675382	(45768785)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	1	2293083
42	7.7	6.7	3.2	chr20	19758154	19758242	(44685925)	+	(CCT)n	Simple_repeat	1	95	(0)	2294579
14	20.5	0.0	2.4	chr20	19758513	19758553	(44685614)	+	G-rich	Low_complexity	1	41	(0)	2294580
2506	15.8	3.1	3.5	chr20	20313692	20314104	(44130063)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	50	2295473
1718	18.0	0.0	2.6	chr20	20314105	20314409	(44129758)	+	AluJb	SINE/Alu	4	300	(12)	2295474
1372	19.5	2.8	0.0	chr20	22627583	22627859	(41816308)	+	MLT2B1	LTR/ERVL	1	285	(235)	2298667
322	19.8	2.9	12.2	chr20	22627911	22628025	(41816142)	C	L1ME3E	LINE/L1	(1405)	4741	4638	2298661
2205	14.6	5.0	0.6	chr20	22982403	22982766	(41461401)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2299090
2497	24.5	4.1	5.4	chr20	25233806	25233837	(39210330)	C	L1ME2	LINE/L1	(0)	6164	6134	2301876
7870	6.8	0.5	0.2	chr20	25233838	25234802	(39209365)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2301877
1747	15.3	13.1	3.6	chr20	25364256	25364642	(39079525)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	4	2302039
19	11.7	0.0	0.0	chr20	25697252	25697279	(38746888)	+	(T)n	Simple_repeat	1	28	(0)	2302618
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
24	25.8	0.0	2.6	chr20	30290568	30290644	(34153523)	+	G-rich	Low_complexity	1	77	(0)	2304833
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
24	25.2	2.7	1.3	chr20	31514352	31514424	(32929743)	+	(GC)n	Simple_repeat	1	75	(0)	2306155
226	29.5	0.0	0.0	chr20	31607784	31607844	(32836323)	C	MIR3	SINE/MIR	(57)	151	91	2306394
185	29.7	1.5	0.0	chr20	32036733	32036796	(32407371)	C	L3	LINE/CR1	(107)	3992	3928	2307480
2038	13.2	0.7	0.0	chr20	32325656	32325966	(32118201)	C	AluSq	SINE/Alu	(0)	313	1	2308221
395	29.8	2.7	2.2	chr20	32359380	32359561	(32084606)	C	MER5A	DNA/hAT-Charlie	(0)	189	7	2308301
449	34.0	7.3	0.0	chr20	33671961	33672151	(30772016)	+	MIRb	SINE/MIR	25	230	(38)	2311311
16	24.5	0.0	0.0	chr20	33748877	33748919	(30695248)	+	(CTCT)n	Simple_repeat	1	43	(0)	2311503
432	35.2	10.8	0.2	chr20	33772425	33772797	(30671370)	C	L2c	LINE/L2	(44)	3343	2913	2311569
185	28.0	2.0	0.0	chr20	35269256	35269305	(29174862)	C	MIRb	SINE/MIR	(167)	101	51	2314919
1936	11.7	6.2	0.0	chr20	36556996	36557268	(27886899)	+	AluSx1	SINE/Alu	1	291	(21)	2317881
910	24.6	14.9	0.5	chr20	40390641	40391018	(24053149)	C	MLT2F	LTR/ERVL	(230)	433	1	2325678
263	38.4	1.8	0.9	chr20	43970039	43970143	(20474024)	C	L2b	LINE/L2	(17)	3358	3253	2332368
573	31.6	9.7	3.3	chr20	44075260	44075834	(20368333)	C	L2b	LINE/L2	(139)	3287	2668	2332586
1633	20.7	4.0	2.5	chr20	44076153	44076518	(20367649)	+	MLT1A	LTR/ERVL-MaLR	1	372	(2)	2332588
351	16.4	0.0	2.9	chr20	45465721	45465789	(18978378)	C	MLT1N2	LTR/ERVL-MaLR	(17)	545	479	2335717
229	23.5	9.0	2.4	chr20	45465797	45465879	(18978288)	+	MLT1C	LTR/ERVL-MaLR	474	562	(0)	2335710
259	23.7	3.8	1.3	chr20	45466113	45466189	(18977978)	C	MLT1K	LTR/ERVL-MaLR	(497)	98	20	2335718
2392	16.2	6.4	1.0	chr20	45640002	45640400	(18803767)	C	MSTB	LTR/ERVL-MaLR	(2)	424	3	2336017
8133	16.8	5.7	2.2	chr20	45640401	45640442	(18803725)	C	L1MA8	LINE/L1	(2424)	5138	5097	2336015
2652	13.7	2.4	0.9	chr20	46697885	46698303	(17745864)	C	MSTB	LTR/ERVL-MaLR	(0)	426	2	2338248
755	21.3	3.2	8.7	chr20	46698319	46698430	(17745737)	C	MLT1D	LTR/ERVL-MaLR	(287)	218	113	2338246
2343	9.4	0.0	0.7	chr20	47235423	47235720	(17208447)	+	AluSx	SINE/Alu	1	296	(16)	2339550
299	24.2	2.9	0.0	chr20	47236053	47236118	(17208049)	+	MamRep137	DNA/TcMar-Tigger	421	488	(22)	2339551
11	21.8	5.4	6.4	chr20	48921544	48921617	(15522550)	+	(CCCTTCG)n	Simple_repeat	1	78	(0)	2343219
20	0.0	0.0	0.0	chr20	49699368	49699389	(14744778)	+	(A)n	Simple_repeat	1	22	(0)	2345071
2143	18.2	6.6	13.1	chr20	49699487	49699648	(14744519)	C	MER44B	DNA/TcMar-Tigger	(0)	550	396	2345072
461	27.4	4.8	8.7	chr20	50169704	50169811	(14274356)	+	MIRb	SINE/MIR	41	154	(114)	2346259
232	17.4	15.1	0.0	chr20	50980607	50980670	(13463497)	+	MIR3	SINE/MIR	82	157	(73)	2348140
302	29.9	10.3	4.3	chr20	50980671	50981136	(13463031)	C	L2a	LINE/L2	(1)	3374	2870	2348141
18	20.4	0.0	3.6	chr20	51370047	51370084	(13074083)	+	(TTCA)n	Simple_repeat	1	36	(0)	2349010
2201	11.9	0.0	0.3	chr20	51370085	51370379	(13073788)	C	AluSx	SINE/Alu	(18)	294	1	2349011
678	17.4	11.5	1.8	chr20	51661933	51662096	(12782071)	+	MER20	DNA/hAT-Charlie	7	188	(31)	2349602
294	23.7	5.9	8.6	chr20	51662188	51662266	(12781901)	C	MER96B	DNA/hAT-Tip100	(238)	179	101	2349603
2897	26.4	7.8	8.3	chr20	52212101	52212783	(12231384)	C	HAL1	LINE/L1	(1683)	824	159	2351015
396	32.1	9.3	5.8	chr20	54133698	54134091	(10310076)	C	L2a	LINE/L2	(1)	3425	3017	2355121
291	32.0	3.4	5.5	chr20	54134076	54134257	(10309910)	C	L2	LINE/L2	(339)	3080	2903	2355122
906	27.8	15.5	1.2	chr20	54134318	54134419	(10309748)	+	L2a	LINE/L2	1075	1182	(2237)	2355123
2899	12.4	6.0	0.0	chr20	56224820	56225270	(8218897)	+	MER9a3	LTR/ERVK	33	512	(0)	2358625
334	26.6	0.0	0.0	chr20	56225271	56225349	(8218818)	C	MLT1E2	LTR/ERVL-MaLR	(404)	101	23	2358624
1255	23.2	10.3	0.8	chr20	56707729	56708106	(7736061)	C	MLT1C	LTR/ERVL-MaLR	(49)	418	1	2359665
13	18.3	5.4	0.0	chr20	56925242	56925278	(7518889)	+	(GCG)n	Simple_repeat	1	39	(0)	2360189
182	26.5	0.0	3.9	chr20	57244005	57244055	(7200112)	+	MIR	SINE/MIR	126	174	(88)	2360826
602	28.6	1.7	0.0	chr20	57244092	57244266	(7199901)	C	MER5A	DNA/hAT-Charlie	(8)	181	4	2360827
373	29.4	3.8	3.8	chr20	57689963	57690093	(6754074)	C	MIRb	SINE/MIR	(16)	252	122	2361599
255	32.2	11.4	4.6	chr20	58554509	58554910	(5889257)	C	L2a	LINE/L2	(2)	3424	2936	2363125
18	15.0	11.6	1.3	chr20	58891914	58891939	(5552228)	+	(GCGCC)n	Simple_repeat	1	76	(0)	2363589
15	17.0	2.4	2.3	chr20	58891940	58891981	(5552186)	+	(CCCGCCC)n	Simple_repeat	1	43	(0)	2363590
28	17.8	0.0	0.0	chr20	58892124	58892174	(5551993)	+	(TC)n	Simple_repeat	1	51	(0)	2363591
701	30.0	11.4	5.6	chr20	59405090	59405502	(5038665)	C	L2b	LINE/L2	(2)	3373	2934	2364409
345	29.4	1.0	0.0	chr20	62166059	62166160	(2278007)	C	MER63A	DNA/hAT-Blackjack	(70)	140	38	2368212
468	22.3	16.4	0.9	chr20	62448535	62448760	(1995407)	C	LTR16A1	LTR/ERVL	(14)	442	175	2368583
1142	23.0	0.4	0.2	chr21	5328933	5329957	(41380026)	+	(TGGAA)n	Simple_repeat	2	1031	(0)	2371010
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
797	22.4	0.5	0.1	chr21	8229975	8230765	(38479218)	+	(TCTC)n	Simple_repeat	2	795	(0)	2373327
446	20.9	0.1	6.5	chr21	8230776	8230919	(38479064)	+	MER39B	LTR/ERV1	298	454	(253)	2373328
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
15708	0.1	0.0	0.0	chr21	8436876	8438744	(38271239)	+	SSU-rRNA_Hsa	rRNA	1	1869	(0)	2373613
13	8.1	3.6	3.5	chr21	8438766	8438793	(38271190)	+	(CCG)n	Simple_repeat	1	29	(0)	2373614
12	18.8	2.6	2.6	chr21	8438825	8438862	(38271121)	+	(CGCGTG)n	Simple_repeat	1	39	(0)	2373615
16	8.3	0.0	0.0	chr21	8438857	8438882	(38271101)	+	(CGTT)n	Simple_repeat	1	26	(0)	2373616
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
785	22.6	0.5	0.1	chr21	8455261	8456884	(38253099)	+	(TCTC)n	Simple_repeat	1	1629	(0)	2373669
560	22.7	0.5	0.2	chr21	8464121	8465014	(38244969)	+	(CTCT)n	Simple_repeat	1	897	(0)	2373686
53	2.0	0.0	0.0	chr21	8465015	8465064	(38244919)	+	(GT)n	Simple_repeat	1	50	(0)	2373687
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
800	10.7	0.6	0.5	chr21	9096388	9100565	(37609418)	+	CER	Satellite	1	4180	(0)	2374227
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
1263	30.4	12.1	1.4	chr21	9257066	9257711	(37452272)	C	L2	LINE/L2	(1779)	1640	916	2374355
355	21.0	6.9	0.0	chr21	9257924	9258004	(37451979)	+	MER21C	LTR/ERVL	30	116	(822)	2374357
490	25.4	1.5	5.0	chr21	9258040	9258180	(37451803)	+	MER21C	LTR/ERVL	99	234	(634)	2374357
1574	22.3	7.7	4.1	chr21	9258166	9258605	(37451378)	+	MER21C	LTR/ERVL	457	913	(25)	2374357
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
41	2.5	0.0	0.0	chr21	9820677	9820716	(36889267)	+	(AC)n	Simple_repeat	1	40	(0)	2374901
1751	29.7	4.9	6.1	chr21	9820724	9822018	(36887965)	C	SST1	Satellite/centr	(1)	1562	284	2374902
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
2858	23.9	5.7	1.3	chr21	9949132	9949759	(36760224)	C	LTR25-int	LTR/ERV1	(353)	4864	4206	2375068
864	20.7	7.5	13.0	chr21	9949759	9950262	(36759721)	C	MER52-int	LTR/ERV1	(6205)	886	195	2375066
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
5929	13.6	4.5	2.0	chr21	10363290	10364171	(36345812)	C	L1MA2	LINE/L1	(1820)	4326	3409	2375401
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
12	5.6	0.0	0.0	chr21	17612698	17612716	(29097267)	+	(CCG)n	Simple_repeat	1	19	(0)	2381936
1291	16.8	5.7	8.9	chr21	21964370	21964573	(24745410)	+	L1MA7	LINE/L1	5957	6134	(157)	2387700
2727	5.0	0.3	0.0	chr21	21964574	21964912	(24745071)	C	LTR14A	LTR/ERVK	(4)	340	1	2387701
1291	16.8	5.7	8.9	chr21	21964913	21965054	(24744929)	+	L1MA7	LINE/L1	6135	6291	(0)	2387700
241	30.1	14.0	5.1	chr21	26737274	26737448	(19972535)	+	L2b	LINE/L2	2658	2850	(569)	2394419
352	32.6	8.0	10.5	chr21	26737510	26737865	(19972118)	+	L2b	LINE/L2	2914	3267	(120)	2394419
1701	23.4	4.2	1.9	chr21	26981692	26982175	(19727808)	+	L1MC3	LINE/L1	6891	7386	(399)	2394748
585	22.0	0.0	4.5	chr21	31082707	31082839	(15627144)	C	MER5A1	DNA/hAT-Charlie	(34)	132	6	2400729
3960	8.7	23.9	0.0	chr21	31083043	31083671	(15626312)	C	LTR12	LTR/ERV1	(0)	826	1	2400730
20	0.0	0.0	0.0	chr21	31398159	31398180	(15311803)	+	(A)n	Simple_repeat	1	22	(0)	2401252
12	11.9	0.0	6.5	chr21	31558175	31558205	(15151778)	+	(GCGCA)n	Simple_repeat	1	31	(0)	2401593
2276	13.4	4.9	3.3	chr21	33011707	33012131	(13697852)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	2404160
309	29.2	7.0	12.9	chr21	33839079	33839503	(12870480)	C	L2a	LINE/L2	(1)	3425	3028	2405693
474	31.9	3.7	0.3	chr21	37564796	37564960	(9145023)	C	MIRb	SINE/MIR	(92)	176	4	2411793
461	25.3	14.2	2.4	chr21	39108788	39109034	(7600949)	+	MLT1J2	LTR/ERVL-MaLR	24	304	(144)	2414020
16	24.9	0.0	0.0	chr21	39387664	39387701	(7322282)	+	(CC)n	Simple_repeat	1	38	(0)	2414498
275	15.9	0.3	6.0	chr21	39554891	39554957	(7155026)	+	AluJb	SINE/Alu	73	133	(169)	2414797
242	23.7	7.3	0.0	chr21	41549796	41549871	(5160112)	C	MER92B	LTR/ERV1	(10)	626	545	2417618
232	16.7	0.0	4.0	chr21	41550009	41550058	(5159925)	C	MER31B	LTR/ERV1	(56)	410	363	2417619
234	17.8	2.2	0.0	chr21	41550027	41550071	(5159912)	C	MER92B	LTR/ERV1	(46)	590	545	2417618
1253	18.2	4.7	4.1	chr21	42037594	42037908	(4672075)	+	L1MB8	LINE/L1	5860	6176	(2)	2418350
1594	19.0	5.0	1.1	chr21	42278356	42278723	(4431260)	+	MLT1B	LTR/ERVL-MaLR	1	383	(7)	2418678
220	17.9	8.2	0.0	chr21	42347930	42347985	(4361998)	+	MIR3	SINE/MIR	90	150	(58)	2418757
2546	14.9	2.4	3.0	chr21	42481018	42481446	(4228537)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2418938
1366	17.0	9.4	7.1	chr21	43903009	43903049	(2806934)	C	MLT1A0	LTR/ERVL-MaLR	(333)	32	3	2421016
2022	17.8	4.5	1.5	chr21	43903050	43903421	(2806562)	+	L1MB3	LINE/L1	5790	6175	(8)	2421015
6971	7.7	5.5	0.3	chr21	44282860	44283777	(2426206)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2421577
1133	24.7	8.1	0.0	chr21	44836551	44836902	(1873081)	+	MLT1B	LTR/ERVL-MaLR	1	383	(7)	2422221
799	31.5	2.1	4.0	chr21	45004606	45004930	(1705053)	C	L1MB7	LINE/L1	(246)	5938	5619	2422397
2063	19.6	4.9	0.0	chr21	45004931	45005334	(1704649)	+	MSTB	LTR/ERVL-MaLR	1	425	(1)	2422398
1718	18.5	2.5	0.0	chr21	45111294	45111612	(1598371)	C	L1MC1	LINE/L1	(2)	6331	6005	2422537
279	21.0	0.0	1.6	chr21	45556445	45556507	(1153476)	C	MER102c	DNA/hAT-Charlie	(196)	135	74	2422927
18	10.0	0.0	2.9	chr21	45590977	45591011	(1118972)	+	(GAGGCG)n	Simple_repeat	1	35	(0)	2422969
294	19.4	6.9	1.1	chr21	45591254	45592117	(1117866)	+	(CA)n	Simple_repeat	1	924	(0)	2422970
732	14.7	0.0	0.0	chr21	45646453	45646568	(1063415)	C	MSTC	LTR/ERVL-MaLR	(0)	428	313	2423038
1147	9.9	6.2	2.1	chr21	45646569	45646754	(1063229)	C	MSTC	LTR/ERVL-MaLR	(234)	194	1	2423038
405	23.5	0.0	3.8	chr21	46063574	46063679	(646304)	C	Tigger5b	DNA/TcMar-Tigger	(0)	472	371	2423464
545	17.9	3.1	0.0	chr21	46063719	46063813	(646170)	C	MER57C2	LTR/ERV1	(287)	98	1	2423463
561	26.3	9.9	3.2	chr21	46628446	46628749	(81234)	C	MLT1E1A	LTR/ERVL-MaLR	(210)	470	49	2424199
610	29.9	7.3	3.9	chr21	46628756	46629114	(80869)	+	LTR52	LTR/ERVL	35	406	(15)	2424200
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
3134	12.3	0.8	0.0	chr22	11930604	11931100	(38887368)	+	L1PA13	LINE/L1	5175	5675	(1091)	2425549
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
3286	14.2	1.4	4.9	chr22	16651289	16651902	(34166566)	C	LTR14B	LTR/ERVK	(0)	608	17	2427643
4186	9.2	1.5	4.5	chr22	16982752	16983376	(33835092)	+	LTR14B	LTR/ERVK	3	608	(0)	2428049
9868	13.5	4.7	5.0	chr22	16983377	16984459	(33834009)	+	L1M2	LINE/L1	4586	5653	(647)	2428048
243	30.7	12.6	4.6	chr22	17268902	17269075	(33549393)	+	L3	LINE/CR1	3733	3922	(177)	2428609
13	15.5	9.3	0.0	chr22	17269109	17269151	(33549317)	+	(GCAGGT)n	Simple_repeat	1	47	(0)	2428610
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
693	25.7	7.0	4.4	chr22	18920649	18921078	(31897390)	+	MLT1G3	LTR/ERVL-MaLR	73	572	(7)	2431203
1284	16.4	0.0	5.5	chr22	18933193	18933272	(31885196)	C	AluJr4	SINE/Alu	(100)	212	142	2431215
2395	9.6	0.0	0.0	chr22	18933273	18933575	(31884893)	C	AluSq	SINE/Alu	(10)	303	1	2431216
14712	12.1	2.3	2.2	chr22	19604284	19604499	(31213969)	C	Tigger1	DNA/TcMar-Tigger	(2199)	219	1	2432294
288	25.7	6.6	8.1	chr22	19604516	19604638	(31213830)	C	MIR	SINE/MIR	(77)	185	65	2432293
487	25.0	9.8	0.0	chr22	19855963	19856118	(30962350)	+	L5	LINE/RTE-X	2078	2250	(15)	2432614
2511	15.5	9.6	0.9	chr22	19856407	19856509	(30961959)	+	Tigger3	DNA/TcMar-Tigger	2530	2572	(457)	2432615
2286	10.0	0.0	1.3	chr22	19856510	19856810	(30961658)	+	AluSz	SINE/Alu	1	297	(15)	2432616
14	27.2	1.5	4.4	chr22	19987244	19987310	(30831158)	+	G-rich	Low_complexity	1	68	(0)	2432769
1855	16.1	0.0	1.7	chr22	20129929	20130220	(30688248)	+	AluJb	SINE/Alu	1	287	(25)	2432940
599	28.2	20.3	4.2	chr22	20305183	20305612	(30512856)	C	MLT1G3	LTR/ERVL-MaLR	(7)	572	73	2433096
1153	11.0	0.7	0.0	chr22	20338381	20338535	(30479933)	+	AluYm1	SINE/Alu	13	168	(143)	2433146
51	2.3	11.4	0.0	chr22	20338573	20338660	(30479808)	+	(AT)n	Simple_repeat	1	98	(0)	2433147
16	15.8	0.0	2.7	chr22	21735482	21735518	(29082950)	+	(GCCC)n	Simple_repeat	1	37	(0)	2435784
15	17.2	2.0	5.8	chr22	21735618	21735668	(29082800)	+	(CGCCCCG)n	Simple_repeat	1	52	(0)	2435785
194	24.2	10.1	1.6	chr22	21837406	21837468	(28981000)	C	L2	LINE/L2	(1111)	2308	2240	2436013
2339	10.2	0.0	0.0	chr22	21940193	21940485	(28877983)	+	AluSx4	SINE/Alu	1	293	(17)	2436253
1969	18.6	11.8	5.1	chr22	21940486	21940733	(28877735)	+	MLT1C	LTR/ERVL-MaLR	182	464	(3)	2436252
1724	16.8	0.3	5.1	chr22	21940898	21941213	(28877255)	C	AluJr	SINE/Alu	(11)	301	1	2436254
751	29.8	7.3	3.0	chr22	21997644	21998072	(28820396)	+	LTR16B2	LTR/ERVL	1	449	(13)	2436336
635	25.4	6.7	7.3	chr22	21998075	21998375	(28820093)	+	MER34	LTR/ERV1	1	502	(205)	2436337
18	7.5	3.6	0.0	chr22	21998398	21998425	(28820043)	+	(TA)n	Simple_repeat	1	29	(0)	2436338
18	0.0	0.0	0.0	chr22	21998425	21998444	(28820024)	+	(TG)n	Simple_repeat	1	20	(0)	2436339
44	11.8	1.4	0.0	chr22	21998444	21998517	(28819951)	+	(GAGA)n	Simple_repeat	1	75	(0)	2436340
221	28.4	1.9	8.1	chr22	22557441	22557551	(28260917)	C	MIRc	SINE/MIR	(120)	148	45	2437078
10658	7.1	6.4	0.7	chr22	23016097	23017584	(27800884)	C	LTR12C	LTR/ERV1	(0)	1579	2	2437657
4303	21.4	4.2	4.2	chr22	23228562	23229792	(27588676)	C	L1MEf	LINE/L1	(4676)	1957	727	2437979
430	34.2	6.2	5.3	chr22	23229950	23230329	(27588139)	C	L1MEf	LINE/L1	(6248)	385	2	2437979
511	25.3	9.7	5.3	chr22	23567206	23567393	(27251075)	C	L2a	LINE/L2	(37)	3389	3193	2438500
489	32.4	14.8	3.8	chr22	24478756	24479342	(26339126)	+	L2	LINE/L2	2189	2851	(568)	2440110
6569	12.4	1.2	1.0	chr22	24630446	24631411	(26187057)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2440379
198	28.4	9.4	0.8	chr22	25376807	25376923	(25441545)	+	L2a	LINE/L2	3274	3401	(25)	2442077
2304	10.7	0.7	0.0	chr22	25735319	25735627	(25082841)	C	AluSp	SINE/Alu	(2)	311	1	2442735
364	31.9	5.7	0.9	chr22	25735697	25735914	(25082554)	+	LTR33	LTR/ERVL	64	292	(223)	2442736
475	26.7	5.3	2.7	chr22	25735929	25736030	(25082438)	+	LTR33	LTR/ERVL	326	430	(85)	2442736
2384	8.9	0.3	0.0	chr22	25755204	25755505	(25062963)	C	AluSp	SINE/Alu	(10)	303	1	2442783
2124	17.5	3.3	3.5	chr22	25755536	25755892	(25062576)	+	MSTB	LTR/ERVL-MaLR	1	359	(67)	2442784
2162	11.0	3.5	0.3	chr22	25755893	25756193	(25062275)	C	AluY	SINE/Alu	(0)	311	1	2442785
2429	10.2	0.0	0.6	chr22	25943707	25944021	(24874447)	C	AluSq2	SINE/Alu	(0)	313	1	2443212
321	29.3	4.1	8.7	chr22	25944022	25944131	(24874337)	+	L2a	LINE/L2	3101	3211	(176)	2443211
2341	8.8	0.3	0.0	chr22	25944568	25944864	(24873604)	+	AluSx4	SINE/Alu	1	298	(12)	2443213
2258	7.4	0.4	0.0	chr22	25999683	25999952	(24818516)	C	AluSx4	SINE/Alu	(39)	271	1	2443353
190	27.5	5.5	0.0	chr22	26000125	26000193	(24818275)	C	L2b	LINE/L2	(50)	3325	3253	2443354
310	32.8	4.5	12.0	chr22	27359155	27359650	(23458818)	C	L2b	LINE/L2	(72)	3303	2843	2446527
17990	14.7	3.5	1.3	chr22	27359788	27361441	(23457027)	C	L1MC1	LINE/L1	(0)	6508	4817	2446528
21	24.4	5.1	1.2	chr22	27919212	27919290	(22899178)	+	(GCC)n	Simple_repeat	1	83	(0)	2447727
393	25.6	16.8	1.2	chr22	27975851	27976020	(22842448)	C	L1MEd	LINE/L1	(2923)	3223	3022	2447831
422	26.7	1.6	0.8	chr22	28112971	28113091	(22705377)	+	MIRb	SINE/MIR	147	268	(0)	2447989
2180	12.6	0.0	0.0	chr22	28828923	28829216	(21989252)	C	AluSx1	SINE/Alu	(18)	294	1	2449316
518	19.1	0.0	0.0	chr22	28829377	28829481	(21988987)	C	Charlie18a	DNA/hAT-Charlie	(168)	174	70	2449317
11	14.6	7.5	2.3	chr22	30387669	30387708	(20430760)	+	(GGAGCA)n	Simple_repeat	1	43	(0)	2452492
217	30.2	1.1	4.4	chr22	30445418	30445507	(20372961)	C	MIR	SINE/MIR	(2)	260	174	2452624
442	27.1	8.8	1.8	chr22	30445722	30445890	(20372578)	+	MIRb	SINE/MIR	87	268	(0)	2452625
12	17.6	0.0	5.6	chr22	30635629	30635664	(20182804)	+	G-rich	Low_complexity	1	36	(0)	2453063
19	16.8	0.0	0.0	chr22	30635690	30635695	(20182773)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	2453064
15	17.6	0.0	0.0	chr22	30635696	30635727	(20182741)	+	(GGC)n	Simple_repeat	1	32	(0)	2453065
23	19.2	7.5	3.0	chr22	30694801	30694894	(20123574)	+	(CGCGCGC)n	Simple_repeat	1	101	(0)	2453199
31	6.0	0.0	6.7	chr22	30968842	30968901	(19849567)	+	(GCC)n	Simple_repeat	1	60	(0)	2453682
188	19.2	7.1	5.5	chr22	30969992	30970046	(19848422)	+	MIRc	SINE/MIR	213	268	(0)	2453685
250	28.2	1.4	4.0	chr22	30970060	30970094	(19848374)	C	MIR3	SINE/MIR	(24)	184	152	2453686
336	22.7	4.9	14.0	chr22	30970095	30970273	(19848195)	+	Charlie4z	DNA/hAT-Charlie	4	165	(2)	2453687
250	28.2	1.4	4.0	chr22	30970274	30970311	(19848157)	C	MIR3	SINE/MIR	(57)	151	113	2453686
1955	15.1	1.7	0.3	chr22	31540584	31540875	(19277593)	C	AluSz	SINE/Alu	(15)	297	2	2455040
1071	27.5	9.9	10.6	chr22	31540876	31541443	(19277025)	C	HAL1	LINE/L1	(1893)	614	6	2455036
1245	13.2	2.4	1.4	chr22	32144717	32144924	(18673544)	+	L1PA10	LINE/L1	5959	6168	(0)	2456444
995	22.9	1.9	3.8	chr22	32144929	32145191	(18673277)	+	L1MB7	LINE/L1	5927	6184	(0)	2456445
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
12	20.6	2.4	2.4	chr22	35257999	35258039	(15560429)	+	(GGCTGC)n	Simple_repeat	1	42	(0)	2462580
1329	22.1	4.4	3.1	chr22	35403840	35404128	(15414340)	+	AluJr	SINE/Alu	7	299	(13)	2462913
409	27.1	1.4	5.7	chr22	35589210	35589397	(15229071)	C	MIRc	SINE/MIR	(29)	233	64	2463374
981	23.7	1.1	3.8	chr22	35589613	35589650	(15228818)	C	L1MB8	LINE/L1	(25)	6153	6122	2463375
28	3.3	0.0	0.0	chr22	37427363	37427393	(13391075)	+	(GTGTGA)n	Simple_repeat	1	31	(0)	2467204
14	28.6	5.1	1.2	chr22	37427395	37427435	(13391033)	+	(GCGTGT)n	Simple_repeat	1	80	(0)	2467205
16	23.3	0.0	0.0	chr22	37427436	37427470	(13390998)	+	(GT)n	Simple_repeat	1	35	(0)	2467206
17	20.6	4.0	0.0	chr22	37427473	37427522	(13390946)	+	(CGCCGC)n	Simple_repeat	1	52	(0)	2467207
1152	14.8	8.6	3.3	chr22	37602223	37602432	(13216036)	C	AluJb	SINE/Alu	(80)	232	11	2467635
332	26.3	19.5	2.6	chr22	37602508	37602698	(13215770)	+	MIRb	SINE/MIR	29	259	(9)	2467636
1196	12.7	2.5	6.8	chr22	37602878	37603039	(13215429)	C	AluJr	SINE/Alu	(12)	300	146	2467637
39	0.0	4.7	0.0	chr22	37661332	37661374	(13157094)	+	(GTGTG)n	Simple_repeat	1	45	(0)	2467757
327	23.9	14.8	0.9	chr22	37661632	37661741	(13156727)	+	L2a	LINE/L2	3297	3424	(2)	2467758
2082	15.2	0.0	0.0	chr22	37883632	37883928	(12934540)	+	AluSz6	SINE/Alu	1	297	(15)	2468313
2123	15.7	5.3	7.2	chr22	37883943	37884458	(12934010)	C	L1MB7	LINE/L1	(60)	6124	5619	2468314
329	32.0	2.0	0.0	chr22	38000216	38000312	(12818156)	C	MIR3	SINE/MIR	(6)	202	104	2468589
19	8.3	0.0	0.0	chr22	38397518	38397543	(12420925)	+	(A)n	Simple_repeat	1	26	(0)	2469394
210	24.6	11.4	0.9	chr22	38452181	38452339	(12366129)	C	MIR1_Amn	SINE/MIR	(24)	206	22	2469531
1226	22.2	4.2	5.3	chr22	40070720	40071057	(10747411)	C	MER46C	DNA/TcMar-Tigger	(1)	337	4	2472829
261	32.3	9.5	4.2	chr22	40510585	40510843	(10307625)	C	L2c	LINE/L2	(6)	3381	3108	2473698
1811	16.3	2.7	0.7	chr22	40655188	40655475	(10162993)	+	AluJb	SINE/Alu	1	294	(18)	2474023
14	25.3	1.8	3.6	chr22	41092589	41092643	(9725825)	+	GA-rich	Low_complexity	1	56	(0)	2475140
12	21.7	0.0	0.0	chr22	41092658	41092689	(9725779)	+	(GGCCG)n	Simple_repeat	1	32	(0)	2475141
15	13.5	0.0	10.0	chr22	41448444	41448493	(9369975)	+	(CCCCCT)n	Simple_repeat	1	50	(0)	2475930
12	18.4	7.7	0.0	chr22	41448469	41448507	(9369961)	+	(CCTTC)n	Simple_repeat	1	42	(0)	2475931
427	23.7	16.6	6.4	chr22	41448756	41448895	(9369573)	+	MIRb	SINE/MIR	56	212	(56)	2475932
762	29.7	8.2	3.8	chr22	41617839	41618082	(9200386)	+	L2a	LINE/L2	2935	3185	(241)	2476337
2351	8.6	0.3	0.0	chr22	41618083	41618374	(9200094)	+	AluSz	SINE/Alu	3	295	(17)	2476338
1333	19.0	16.4	1.6	chr22	43868171	43868614	(6949854)	C	LTR49	LTR/ERV1	(72)	523	1	2480907
2221	12.3	0.0	0.7	chr22	44072435	44072742	(6745726)	C	AluSz	SINE/Alu	(6)	306	1	2481316
737	22.4	7.8	14.2	chr22	44624469	44624812	(6193656)	+	MLT1B	LTR/ERVL-MaLR	45	364	(26)	2482305
17	22.3	1.8	3.5	chr22	45240724	45240779	(5577689)	+	(CGG)n	Simple_repeat	1	57	(0)	2483503
1885	11.3	0.8	0.0	chr22	45267752	45268007	(5550461)	C	AluJo	SINE/Alu	(4)	308	51	2483576
15	10.0	2.9	2.9	chr22	45309983	45310022	(5508446)	+	(CGCTCT)n	Simple_repeat	1	40	(0)	2483679
28	0.0	0.0	0.0	chr22	46587641	46587667	(4230801)	+	(GTCCT)n	Simple_repeat	1	27	(0)	2485774
292	32.7	10.2	2.6	chr22	46954171	46954368	(3864100)	+	MIRb	SINE/MIR	31	241	(27)	2486280
1205	31.1	12.7	4.8	chr22	48131357	48132075	(2686393)	+	L2	LINE/L2	1761	2562	(857)	2487852
349	31.0	10.0	2.4	chr22	48639310	48639484	(2178984)	C	L3b	LINE/CR1	(731)	3368	3223	2488460
12	24.1	3.5	3.4	chr22	49020116	49020172	(1798296)	+	(CACCCT)n	Simple_repeat	1	59	(0)	2488889
302	27.4	3.4	1.7	chr22	49020367	49020481	(1797987)	C	L1MC5	LINE/L1	(1668)	7636	7520	2488890
34	36.0	0.0	4.0	chr22	49970634	49970807	(847661)	+	(GT)n	Simple_repeat	1	174	(0)	2490008
1988	20.1	10.4	2.9	chr22	50204644	50205302	(613166)	+	L1MB1	LINE/L1	5490	6134	(49)	2490327
1598	15.5	8.1	1.4	chr22	50205303	50205579	(612889)	+	AluJo	SINE/Alu	1	297	(15)	2490328
435	30.4	4.8	1.8	chr3	8629445	8629639	(189665920)	C	MIR3	SINE/MIR	(6)	202	2	2505702
345	35.4	5.9	3.0	chr3	9258763	9259123	(189036436)	+	L2a	LINE/L2	2671	3042	(377)	2506842
1533	15.3	0.7	9.5	chr3	9259280	9259606	(189035953)	C	AluJo	SINE/Alu	(13)	299	2	2506843
23	19.7	1.9	1.8	chr3	9769207	9769260	(188526299)	+	(AC)n	Simple_repeat	1	55	(0)	2507908
381	29.0	7.9	6.1	chr3	11044203	11044301	(187251258)	C	MIRb	SINE/MIR	(15)	253	147	2510634
2212	14.4	8.7	0.0	chr3	11044302	11044690	(187250869)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2510635
13	13.2	0.0	0.0	chr3	12229248	12229272	(186066287)	+	(CCA)n	Simple_repeat	1	25	(0)	2512896
2056	15.3	0.7	0.0	chr3	12298827	12299133	(185996426)	C	AluJb	SINE/Alu	(3)	309	1	2513025
390	25.5	7.0	0.9	chr3	12299155	12299261	(185996298)	C	L2a	LINE/L2	(4)	3422	3309	2513026
13	29.7	1.4	4.2	chr3	12299452	12299481	(185996078)	+	(TTATA)n	Simple_repeat	1	70	(0)	2513027
16	17.5	2.6	0.0	chr3	12299482	12299520	(185996039)	+	(ATATATT)n	Simple_repeat	1	40	(0)	2513028
61	33.2	1.4	0.9	chr3	13816680	13816901	(184478658)	+	(CATC)n	Simple_repeat	1	225	(0)	2515961
285	31.8	0.0	0.0	chr3	14635198	14635281	(183660278)	C	MER117	DNA/hAT-Charlie	(0)	197	114	2517369
257	16.1	17.2	1.0	chr3	14635282	14635373	(183660186)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	461	2517370
4506	7.0	3.8	0.2	chr3	15364053	15364635	(182930924)	+	LTR14B	LTR/ERVK	4	608	(0)	2518675
2144	9.9	0.0	0.0	chr3	15364636	15364907	(182930652)	C	AluSx1	SINE/Alu	(40)	272	1	2518676
18	10.7	0.0	3.0	chr3	18445289	18445321	(179850238)	+	(GCC)n	Simple_repeat	1	33	(0)	2523293
13	21.8	2.6	0.0	chr3	18445552	18445589	(179849970)	+	(CTTGTTG)n	Simple_repeat	1	39	(0)	2523294
2109	10.2	7.5	0.0	chr3	23179214	23179496	(175116063)	C	AluSp	SINE/Alu	(6)	307	2	2529792
685	25.2	5.9	0.7	chr3	23179611	23179815	(175115744)	+	MIR	SINE/MIR	24	233	(29)	2529793
1992	12.5	3.5	4.4	chr3	23754337	23754552	(174541007)	C	L1MB3	LINE/L1	(134)	6049	5838	2530695
1637	16.9	1.3	7.1	chr3	23754561	23754886	(174540673)	C	AluJb	SINE/Alu	(4)	308	2	2530697
305	24.2	0.0	0.0	chr3	23754888	23754949	(174540610)	+	MER5A1	DNA/hAT-Charlie	103	164	(2)	2530698
1501	22.8	7.1	1.1	chr3	24684760	24685131	(173610428)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2532247
719	27.8	7.8	0.0	chr3	25073397	25073619	(173221940)	+	MER103C	DNA/hAT-Charlie	8	249	(48)	2532839
345	25.4	11.6	3.0	chr3	28241156	28241289	(170054270)	+	L2a	LINE/L2	3279	3425	(1)	2537505
4349	7.5	3.5	0.8	chr3	30103712	30104303	(168191256)	C	LTR14B	LTR/ERVK	(0)	608	1	2540069
2082	7.7	1.7	18.2	chr3	32102178	32102590	(166192969)	+	LTR14A	LTR/ERVK	1	344	(0)	2543208
20	16.4	0.0	0.0	chr3	32102688	32102721	(166192838)	+	A-rich	Low_complexity	1	34	(0)	2543209
837	17.6	0.0	0.0	chr3	32102731	32102855	(166192704)	+	AluJr	SINE/Alu	1	125	(187)	2543210
27	14.0	2.1	0.0	chr3	33948409	33948455	(164347104)	+	(CA)n	Simple_repeat	1	48	(0)	2546730
24035	12.0	2.3	2.2	chr3	37410320	37412626	(160882933)	C	L1MA3	LINE/L1	(5219)	2346	14	2551515
18	23.1	4.0	3.8	chr3	37452044	37452119	(160843440)	+	(CGC)n	Simple_repeat	1	79	(0)	2551605
2272	11.0	0.7	0.0	chr3	39759922	39760212	(158535347)	C	AluSx1	SINE/Alu	(19)	293	1	2554992
1090	19.3	38.5	0.3	chr3	39760266	39760650	(158534909)	C	L1ME2	LINE/L1	(14)	6150	5606	2554993
722	20.0	10.1	2.3	chr3	40308962	40309135	(157986424)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2555736
6201	19.1	5.7	1.0	chr3	40786893	40788135	(157507424)	+	MSTB-int	LTR/ERVL-MaLR	346	1651	(0)	2556567
2175	15.9	6.5	0.8	chr3	40788146	40788538	(157507021)	+	MSTB	LTR/ERVL-MaLR	6	422	(4)	2556567
494	25.9	1.3	0.0	chr3	41291568	41291714	(157003845)	+	L1ME3C	LINE/L1	5718	5866	(257)	2557278
476	21.0	6.5	5.4	chr3	41291713	41291826	(157003733)	+	L1ME3C	LINE/L1	6006	6121	(52)	2557278
2674	6.2	0.0	1.0	chr3	41291827	41292132	(157003427)	C	AluY	SINE/Alu	(8)	303	1	2557279
474	32.1	7.4	0.6	chr3	43044481	43044643	(155250916)	C	MIRb	SINE/MIR	(56)	212	38	2560057
440	22.1	11.2	5.1	chr3	43044647	43044822	(155250737)	+	MER58B	DNA/hAT-Charlie	3	190	(151)	2560058
3211	12.2	5.6	8.2	chr3	43044823	43045431	(155250128)	C	LTR14B	LTR/ERVK	(0)	608	17	2560059
7434	8.2	0.8	0.2	chr3	43258305	43259266	(155036293)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2560374
2423	6.8	1.7	0.0	chr3	43690061	43690354	(154605205)	C	AluSp	SINE/Alu	(14)	299	1	2560994
226	33.6	4.2	0.0	chr3	45007047	45007159	(153288400)	+	Charlie13b	DNA/hAT-Charlie	395	512	(0)	2563040
605	16.7	10.0	3.6	chr3	45996067	45996234	(152299325)	+	MER33	DNA/hAT-Charlie	34	213	(111)	2564747
227	34.4	11.2	0.5	chr3	46695272	46695455	(151600104)	+	MIRc	SINE/MIR	9	214	(54)	2565799
1910	17.3	0.0	0.3	chr3	47266363	47266663	(151028896)	+	AluJr	SINE/Alu	2	301	(11)	2566800
398	20.6	3.8	2.7	chr3	47266697	47266822	(151028737)	C	MIRb	SINE/MIR	(15)	253	135	2566801
300	36.3	3.4	2.3	chr3	48507801	48507975	(149787584)	+	MLT1N2	LTR/ERVL-MaLR	353	529	(33)	2569471
1136	17.1	0.0	0.0	chr3	48623593	48623762	(149671797)	+	AluJb	SINE/Alu	132	301	(11)	2569630
1151	28.3	9.3	3.5	chr3	48899105	48899581	(149395978)	C	L2a	LINE/L2	(0)	3426	2904	2570221
47	2.2	0.0	0.0	chr3	49673796	49673842	(148621717)	+	(CTCACG)n	Simple_repeat	1	47	(0)	2571786
1367	28.1	6.1	3.5	chr3	49925835	49926432	(148369127)	+	L2a	LINE/L2	2639	3269	(157)	2572198
192	34.6	3.6	0.0	chr3	50415075	50415155	(147880404)	C	MIRc	SINE/MIR	(74)	194	111	2573009
372	31.1	5.7	2.6	chr3	51974749	51974900	(146320659)	C	MIR	SINE/MIR	(0)	262	106	2575246
248	24.2	20.1	0.7	chr3	52313843	52313976	(145981583)	C	MIR1_Amn	SINE/MIR	(82)	186	22	2575749
827	31.5	13.2	9.2	chr3	52341872	52343131	(145952428)	C	L2a	LINE/L2	(50)	3376	2045	2575795
27	0.0	0.0	0.0	chr3	53156625	53156650	(145138909)	+	(GGCGG)n	Simple_repeat	1	26	(0)	2577103
423	22.1	10.3	1.2	chr3	53785638	53785794	(144509765)	C	MIRb	SINE/MIR	(4)	258	93	2578082
263	35.0	3.3	4.8	chr3	53786077	53786325	(144509234)	+	UCON29	DNA/PiggyBac?	175	419	(20)	2578083
197	35.8	6.4	2.4	chr3	54556629	54556794	(143738765)	+	L3	LINE/CR1	2250	2422	(1677)	2579222
532	23.1	1.5	0.0	chr3	57020364	57020493	(141275066)	+	MLT1K	LTR/ERVL-MaLR	6	137	(458)	2583187
752	27.8	9.2	3.0	chr3	57020515	57020851	(141274708)	+	MLT1K	LTR/ERVL-MaLR	213	572	(23)	2583187
190	36.2	9.4	0.0	chr3	58651500	58651615	(139643944)	+	L2b	LINE/L2	3239	3366	(9)	2586438
2032	13.9	0.7	0.0	chr3	61394561	61394840	(136900719)	+	AluSz	SINE/Alu	24	305	(7)	2590483
26919	3.9	0.2	0.1	chr3	61395092	61399418	(136896141)	+	L1PA4	LINE/L1	1499	6155	(0)	2590484
2740	16.4	15.6	2.4	chr3	61697246	61697925	(136597634)	+	LTR48	LTR/ERV1	1	787	(0)	2591078
17	4.9	0.0	0.0	chr3	61804680	61804700	(136490859)	+	(A)n	Simple_repeat	1	21	(0)	2591259
12	4.9	0.0	4.3	chr3	65701988	65702010	(132593549)	+	(TTAT)n	Simple_repeat	1	23	(0)	2597853
1987	24.8	6.2	1.4	chr3	65828630	65829214	(132466345)	+	MLT1E2	LTR/ERVL-MaLR	13	627	(0)	2598089
1753	18.3	4.4	0.6	chr3	65829297	65829647	(132465912)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	2598090
2196	16.5	5.1	2.4	chr3	66974755	66975170	(131320389)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2600171
194	30.1	2.8	1.0	chr3	66975202	66975305	(131320254)	C	L2c	LINE/L2	(508)	2911	2806	2600165
229	29.9	3.1	4.9	chr3	71434672	71434833	(126860726)	+	L1ME3Cz	LINE/L1	790	948	(49)	2607226
1998	20.8	3.3	10.1	chr3	71590170	71590726	(126704833)	+	L1MC4a	LINE/L1	6536	7053	(829)	2607467
329	21.8	0.0	0.0	chr3	76724260	76724314	(121571245)	+	AluYj4	SINE/Alu	228	282	(29)	2615942
16	0.0	0.0	0.0	chr3	79768206	79768222	(118527337)	+	(A)n	Simple_repeat	1	17	(0)	2619897
3245	23.0	3.0	0.1	chr3	83588261	83588914	(114706645)	C	L1MA5A	LINE/L1	(6104)	685	13	2624754
702	27.9	5.0	0.3	chr3	83588893	83589176	(114706383)	C	L1MA4	LINE/L1	(3907)	3658	3361	2624752
49	14.8	0.0	0.0	chr3	86988641	86988718	(111306841)	+	(A)n	Simple_repeat	1	78	(0)	2628962
2057	20.9	2.4	2.4	chr3	87949851	87950307	(110345252)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	2630158
295	34.4	9.6	9.6	chr3	89056870	89057120	(109238439)	+	MIRb	SINE/MIR	10	260	(8)	2631564
21861	9.4	1.0	0.2	chr3	89073987	89078067	(109217492)	+	L1PA7	LINE/L1	2040	6142	(12)	2631587
3957	17.4	3.8	0.6	chr3	95946608	95947488	(102348071)	C	L1MA6	LINE/L1	(2635)	4927	4019	2636107
2839	14.7	4.2	9.7	chr3	95947489	95948114	(102347445)	C	LTR14B	LTR/ERVK	(0)	608	19	2636109
2841	6.2	0.3	0.0	chr3	97071369	97071722	(101223837)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2637360
1767	11.6	2.3	0.7	chr3	97071732	97072027	(101223532)	C	L1PB1	LINE/L1	(4)	6147	5847	2637361
1387	8.9	3.8	0.5	chr3	97072028	97072230	(101223329)	+	L1PB1	LINE/L1	5627	5836	(315)	2637361
4517	9.8	1.6	0.3	chr3	99776580	99777203	(98518356)	C	MER41B	LTR/ERV1	(0)	634	3	2640691
3708	20.3	10.6	2.2	chr3	101310590	101310730	(96984829)	+	L1ME2z	LINE/L1	6291	6441	(3)	2642846
188	33.0	8.8	8.3	chr3	101310823	101311014	(96984545)	+	MamTip2	DNA/hAT-Tip100	8	200	(105)	2642850
695	23.0	7.4	1.1	chr3	101311016	101311219	(96984340)	+	L1M4b	LINE/L1	4	185	(6682)	2642851
5717	18.9	7.0	2.3	chr3	101311206	101313127	(96982432)	+	L1MB8	LINE/L1	4128	6177	(1)	2642852
29	0.0	0.0	0.0	chr3	101513214	101513245	(96782314)	+	(A)n	Simple_repeat	1	32	(0)	2643091
606	29.2	8.2	11.4	chr3	105500862	105501414	(92794145)	+	Tigger15a	DNA/TcMar-Tigger	19	552	(163)	2648357
3870	15.5	3.8	4.2	chr3	106396888	106397557	(91898002)	C	MER4D0	LTR/ERV1	(62)	810	137	2649471
2778	15.0	5.9	9.7	chr3	111054795	111055413	(87240146)	+	LTR14B	LTR/ERVK	15	608	(0)	2656027
284	25.9	8.2	3.5	chr3	111055434	111055549	(87240010)	C	L2	LINE/L2	(1882)	1537	1416	2656028
354	33.9	4.6	0.0	chr3	112377552	112377675	(85917884)	C	MIRb	SINE/MIR	(32)	236	107	2657741
2248	15.6	2.7	0.2	chr3	112377759	112378151	(85917408)	+	MSTB1	LTR/ERVL-MaLR	30	432	(0)	2657742
36	25.1	2.9	0.9	chr3	113211709	113211813	(85083746)	+	(CA)n	Simple_repeat	1	108	(0)	2658908
20	25.1	3.1	5.0	chr3	113212133	113212230	(85083329)	+	G-rich	Low_complexity	1	101	(0)	2658909
312	33.8	15.7	4.3	chr3	115648456	115649062	(82646497)	C	L2	LINE/L2	(841)	2578	1875	2662396
70	26.2	1.1	0.6	chr3	116819575	116819754	(81475805)	+	(AT)n	Simple_repeat	1	182	(0)	2664013
2430	16.8	0.2	3.6	chr3	116819766	116820209	(81475350)	C	Tigger2a	DNA/TcMar-Tigger	(5)	429	1	2664014
433	28.7	4.6	3.6	chr3	122532418	122532612	(75762947)	+	MamGypLTR2c	LTR/Gypsy	845	1041	(27)	2672154
710	32.5	11.9	3.1	chr3	122532647	122533554	(75762005)	C	L2c	LINE/L2	(153)	3234	2239	2672151
2206	14.0	9.3	1.8	chr3	122572926	122573324	(75722235)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2672239
628	28.4	2.5	5.2	chr3	123907731	123907925	(74387634)	C	L1M7	LINE/L1	(5916)	302	105	2674480
1530	17.2	0.8	3.1	chr3	124643493	124643753	(73651806)	C	AluJr	SINE/Alu	(23)	289	35	2675646
559	24.5	1.5	2.6	chr3	124643771	124643935	(73651624)	C	L1MA9	LINE/L1	(2)	6289	6132	2675647
18007	15.4	3.5	2.8	chr3	126244030	126247093	(72048466)	C	HUERS-P2-int	LTR/ERV1	(1)	3087	2	2678295
2130	14.8	7.0	0.0	chr3	126686844	126687202	(71608357)	C	MSTB	LTR/ERVL-MaLR	(0)	426	41	2678940
6182	8.8	2.8	0.5	chr3	126687230	126687583	(71607976)	C	L1PB1	LINE/L1	(1)	6866	6497	2678941
415	28.8	12.6	0.9	chr3	127064833	127065049	(71230510)	C	LTR102_Mam	LTR/ERVL	(281)	570	325	2679453
698	20.0	1.8	10.1	chr3	128007391	128007737	(70287822)	C	MER33	DNA/hAT-Charlie	(105)	219	41	2681040
764	28.4	7.0	4.6	chr3	128007751	128007998	(70287561)	C	L1M5	LINE/L1	(446)	5748	5491	2681041
2353	6.5	3.0	0.0	chr3	128007999	128008163	(70287396)	C	AluY	SINE/Alu	(11)	300	136	2681042
22	16.3	1.7	4.9	chr3	128247763	128247822	(70047737)	+	GA-rich	Low_complexity	1	61	(0)	2681462
632	28.8	2.4	8.4	chr3	128588913	128589193	(69706366)	+	MamRep4096	DNA/hAT-Tip100	78	336	(90)	2681994
6161	13.3	2.3	3.4	chr3	128589213	128590243	(69705316)	C	L1MC1	LINE/L1	(0)	6333	5305	2681996
304	29.9	16.9	1.1	chr3	128618271	128618449	(69677110)	C	MIR	SINE/MIR	(29)	233	21	2682054
3860	11.2	2.5	5.1	chr3	128920573	128921195	(69374364)	+	LTR14B	LTR/ERVK	3	608	(0)	2682687
1165	11.3	1.7	0.0	chr3	128921196	128921372	(69374187)	+	HERVK14-int	LTR/ERVK	1	180	(5916)	2682687
8565	7.2	1.2	1.1	chr3	128921368	128922058	(69373501)	+	HERVK14-int	LTR/ERVK	1289	1989	(4107)	2682687
2181	10.2	0.3	1.1	chr3	128924433	128924746	(69370813)	C	AluSp	SINE/Alu	(0)	313	1	2682691
4116	11.0	0.7	6.5	chr3	128924747	128925079	(69370480)	+	LTR14B	LTR/ERVK	277	607	(1)	2682690
1410	20.1	7.2	6.3	chr3	128925081	128925114	(69370445)	+	L1MEg	LINE/L1	1028	1050	(5192)	2682685
2222	14.2	0.3	3.4	chr3	128925115	128925463	(69370096)	C	MER1B	DNA/hAT-Charlie	(1)	338	1	2682692
715	24.7	1.4	5.0	chr3	128941777	128941983	(69353576)	C	L1ME3G	LINE/L1	(3169)	2977	2770	2682716
2148	22.5	10.6	1.6	chr3	128942011	128942664	(69352895)	C	MER77B	LTR/ERVL	(149)	782	1	2682729
3080	15.7	5.0	4.1	chr3	129756925	129757538	(68538021)	+	MER73	LTR/ERVL	1	623	(21)	2684342
35939	6.1	0.2	0.3	chr3	129902413	129906802	(68388757)	+	HERVK9-int	LTR/ERVK	1637	6021	(0)	2684629
2158	12.8	0.0	0.7	chr3	131556092	131556387	(66739172)	+	AluSz6	SINE/Alu	1	294	(18)	2687080
2356	12.1	0.0	0.0	chr3	131923423	131923729	(66371830)	+	AluSz	SINE/Alu	1	307	(5)	2687668
661	18.6	17.0	3.1	chr3	133718593	133718753	(64576806)	C	MER5A	DNA/hAT-Charlie	(0)	189	2	2690433
15915	12.1	2.1	2.5	chr3	134040388	134042885	(64252674)	+	MER101-int	LTR/ERV1	409	2896	(3743)	2690839
295	20.3	3.9	1.3	chr3	134064044	134064118	(64231441)	+	MIR3	SINE/MIR	108	184	(24)	2690872
275	25.5	13.4	0.0	chr3	134064408	134064503	(64231056)	C	MIR3	SINE/MIR	(25)	183	77	2690873
567	26.5	7.9	1.4	chr3	134064524	134064737	(64230822)	C	L1ME1	LINE/L1	(6)	6173	5945	2690874
2238	16.5	6.0	3.6	chr3	134260917	134261337	(64034222)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2691158
4839	27.3	12.2	5.7	chr3	134261338	134261703	(64033856)	C	HAL1	LINE/L1	(2120)	387	4	2691153
20	4.3	0.0	0.0	chr3	134464150	134464173	(63831386)	+	(A)n	Simple_repeat	1	24	(0)	2691509
2772	11.6	6.5	10.6	chr3	136457036	136457660	(61837899)	+	LTR14B	LTR/ERVK	11	608	(0)	2694432
889	23.7	7.2	13.6	chr3	136457662	136457813	(61837746)	+	L1MA4	LINE/L1	3021	3177	(4388)	2694433
871	15.3	2.3	0.8	chr3	136457814	136457944	(61837615)	+	AluJo	SINE/Alu	1	133	(179)	2694434
2213	18.2	3.1	1.0	chr3	136533387	136533791	(61761768)	C	MSTB	LTR/ERVL-MaLR	(12)	414	1	2694540
5888	15.2	2.8	3.3	chr3	136533792	136535381	(61760178)	+	L1MA4A	LINE/L1	4549	6145	(158)	2694539
1795	18.1	2.7	5.5	chr3	138611371	138611544	(59684015)	C	L1MB4	LINE/L1	(1)	6179	6006	2697795
2316	17.2	2.8	2.8	chr3	138611545	138611975	(59683584)	+	MSTB1	LTR/ERVL-MaLR	1	431	(1)	2697796
2053	24.5	3.0	10.1	chr3	138611976	138612096	(59683463)	C	L1MA9	LINE/L1	(306)	6006	5884	2697797
42	4.3	0.0	0.0	chr3	138916148	138916195	(59379364)	+	(CAGCCCA)n	Simple_repeat	1	48	(0)	2698511
306	28.5	10.5	0.0	chr3	139473256	139473392	(58822167)	+	Tigger12c	DNA/TcMar-Tigger	47	199	(535)	2699375
243	35.5	4.0	2.9	chr3	140363716	140363889	(57931670)	C	L2a	LINE/L2	(543)	2876	2701	2700735
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
677	33.3	2.1	9.9	chr3	143375266	143375738	(54919821)	+	MLT1H	LTR/ERVL-MaLR	1	435	(114)	2705590
233	33.3	0.0	1.1	chr3	144256048	144256138	(54039421)	C	HAL1ME	LINE/L1	(2274)	191	102	2706849
814	30.1	0.5	0.5	chr3	144368956	144369179	(53926380)	+	L1PA13	LINE/L1	504	727	(6059)	2706965
6309	22.2	1.6	2.1	chr3	144369176	144372056	(53923503)	+	L1PA13	LINE/L1	955	3753	(3013)	2706965
2052	19.1	4.0	0.7	chr3	148024043	148024454	(50271105)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2711576
481	11.8	0.0	0.0	chr3	149419839	149419906	(48875653)	+	MER5A	DNA/hAT-Charlie	122	189	(0)	2713554
1013	27.8	10.1	3.0	chr3	149419911	149420073	(48875486)	+	MLT1B	LTR/ERVL-MaLR	3	182	(285)	2713555
838	14.8	2.3	0.0	chr3	149420074	149420201	(48875358)	+	AluJr	SINE/Alu	1	131	(181)	2713556
1013	27.8	10.1	3.0	chr3	149420202	149420222	(48875337)	+	MLT1B	LTR/ERVL-MaLR	183	214	(253)	2713555
2033	10.5	1.1	0.0	chr3	149420223	149420480	(48875079)	+	AluSp	SINE/Alu	1	261	(52)	2713557
2261	13.9	8.5	3.2	chr3	149857843	149858274	(48437285)	+	MSTB2	LTR/ERVL-MaLR	1	457	(0)	2714329
333	20.8	6.2	13.1	chr3	150721212	150721287	(47574272)	+	MIR	SINE/MIR	181	262	(0)	2715727
287	20.0	3.4	3.4	chr3	150721309	150721396	(47574163)	C	MamRep564	Unknown	(157)	200	113	2715729
2112	9.3	0.0	0.0	chr3	152963734	152963990	(45331569)	C	AluSq2	SINE/Alu	(56)	257	1	2718929
490	23.4	21.9	5.9	chr3	152964020	152964292	(45331267)	C	MER21C	LTR/ERVL	(595)	343	15	2718930
1999	19.1	1.8	4.2	chr3	152992907	152993207	(45302352)	C	MLT2B3	LTR/ERVL	(252)	418	117	2718966
260	33.7	1.0	0.0	chr3	152993474	152993571	(45301988)	+	LTR33	LTR/ERVL	376	474	(41)	2718969
2482	14.3	5.2	2.7	chr3	153816129	153816573	(44478986)	+	MSTB2	LTR/ERVL-MaLR	1	457	(0)	2720288
13	0.0	0.0	0.0	chr3	154122402	154122418	(44173141)	+	(CGC)n	Simple_repeat	1	17	(0)	2720753
6844	21.1	4.7	3.2	chr3	154941998	154944330	(43351229)	+	L1MA5A	LINE/L1	3112	5398	(2167)	2721803
4501	5.9	2.5	1.6	chr3	154944331	154944911	(43350648)	C	LTR14C	LTR/ERVK	(0)	587	1	2721805
1400	15.5	3.3	5.4	chr3	155805476	155805753	(42489806)	+	AluJr	SINE/Alu	38	309	(3)	2723033
583	9.6	6.0	1.1	chr3	155861234	155861328	(42434231)	C	L1PB1	LINE/L1	(0)	6151	6052	2723170
2273	21.7	1.8	1.4	chr3	155861329	155861823	(42433736)	C	L1ME1	LINE/L1	(67)	6112	5616	2723166
467	25.0	6.3	4.5	chr3	156318322	156318522	(41977037)	C	MER102a	DNA/hAT-Charlie	(1)	329	125	2723853
1038	26.1	13.9	2.3	chr3	156634782	156635461	(41660098)	+	L2a	LINE/L2	2649	3426	(0)	2724332
796	26.8	11.3	3.0	chr3	156808025	156808363	(41487196)	C	LTR79	LTR/ERVL	(153)	374	4	2724591
425	23.4	4.3	1.8	chr3	157903722	157903834	(40391725)	C	MLT1H2	LTR/ERVL-MaLR	(303)	186	71	2726099
2611	13.1	3.0	0.5	chr3	157903851	157904265	(40391294)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2726100
2657	6.5	13.8	0.3	chr3	159022112	159022556	(39273003)	+	LTR14B	LTR/ERVK	1	608	(0)	2727637
13854	13.7	2.2	4.2	chr3	159022558	159026946	(39268613)	C	L1PA16	LINE/L1	(1974)	4875	576	2727636
255	31.4	14.8	3.7	chr3	159238483	159238750	(39056809)	C	L2c	LINE/L2	(0)	3387	3085	2727960
18586	9.2	1.1	0.7	chr3	160243755	160245169	(38050390)	+	L1PBa	LINE/L1	4286	5712	(1150)	2729508
1627	11.1	14.4	2.6	chr3	160245170	160245287	(38050272)	C	LTR14B	LTR/ERVK	(0)	608	477	2729512
45	4.1	0.0	0.0	chr3	160245288	160245338	(38050221)	+	(GGAGGCTGC)n	Simple_repeat	1	51	(0)	2729513
1627	11.7	12.3	5.8	chr3	160245339	160245620	(38049939)	C	LTR14B	LTR/ERVK	(132)	476	2	2729512
491	30.0	1.0	0.2	chr3	160883699	160883830	(37411729)	+	MIRb	SINE/MIR	3	140	(128)	2730514
1997	9.3	9.0	10.6	chr3	162598531	162598946	(35696613)	+	LTR14B	LTR/ERVK	1	608	(0)	2732796
2046	25.3	1.1	0.4	chr3	162598948	162599502	(35696057)	+	L1MB7	LINE/L1	5259	5817	(361)	2732795
2423	16.3	2.8	0.2	chr3	162634411	162634821	(35660738)	C	MSTB	LTR/ERVL-MaLR	(4)	422	1	2732844
554	28.7	6.9	4.6	chr3	162634822	162634849	(35660710)	+	LTR33	LTR/ERVL	177	202	(313)	2732843
253	33.0	8.0	3.5	chr3	162634872	162635097	(35660462)	+	LTR33	LTR/ERVL	259	495	(20)	2732843
3829	12.0	1.0	5.1	chr3	163689139	163689770	(34605789)	+	LTR14B	LTR/ERVK	3	608	(0)	2734083
354	27.0	13.3	3.5	chr3	163689771	163689895	(34605664)	+	L1ME3	LINE/L1	3092	3217	(2929)	2734082
294	35.2	3.8	2.2	chr3	164791311	164791493	(33504066)	+	LTR78	LTR/ERV1	698	883	(421)	2735374
3115	12.1	6.6	8.9	chr3	165388247	165388855	(32906704)	C	LTR14B	LTR/ERVK	(0)	608	15	2736164
5417	23.2	6.5	6.7	chr3	167318888	167321201	(30974358)	+	L1MC4a	LINE/L1	5431	7882	(0)	2738540
420	33.2	3.5	3.5	chr3	169172783	169172982	(29122577)	+	MIRc	SINE/MIR	68	267	(1)	2741018
222	34.2	0.0	2.7	chr3	169299476	169299550	(28996009)	+	MIRc	SINE/MIR	49	121	(147)	2741176
443	31.3	0.7	0.7	chr3	169687917	169688064	(28607495)	+	MER5B	DNA/hAT-Charlie	3	150	(28)	2741672
2305	8.5	2.6	0.7	chr3	170359314	170359619	(27935940)	+	AluSx	SINE/Alu	1	312	(0)	2742892
2964	21.4	8.3	8.1	chr3	170787662	170787974	(27507585)	+	L1ME2z	LINE/L1	5321	5650	(794)	2743591
2137	19.7	4.6	8.0	chr3	170787975	170788498	(27507061)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	2743594
3155	18.4	4.4	2.4	chr3	172676152	172676776	(25618783)	+	LTR9B	LTR/ERV1	7	644	(0)	2746488
1917	10.9	10.7	7.3	chr3	172719014	172719432	(25576127)	+	LTR14B	LTR/ERVK	1	608	(0)	2746577
6222	7.6	1.2	1.3	chr3	172719433	172719967	(25575592)	+	HERVK14-int	LTR/ERVK	1	540	(5556)	2746577
13	5.2	0.0	0.0	chr3	173400247	173400266	(24895293)	+	(TTA)n	Simple_repeat	1	20	(0)	2747511
1269	25.5	9.1	5.3	chr3	177130173	177130675	(21164884)	+	L1ME4b	LINE/L1	340	864	(28)	2752628
783	17.1	0.0	1.6	chr3	177130879	177131007	(21164552)	+	FLAM_A	SINE/Alu	1	127	(15)	2752631
476	25.3	5.7	6.2	chr3	183517212	183517336	(14778223)	+	Charlie23a	DNA/hAT-Charlie	213	337	(2)	2762814
472	26.8	13.7	2.1	chr3	186998850	186999036	(11296523)	C	MIRb	SINE/MIR	(50)	218	7	2769404
203	30.6	3.0	4.8	chr3	186999225	186999327	(11296232)	+	MIRb	SINE/MIR	154	254	(14)	2769405
1647	24.4	12.8	3.5	chr3	190952624	190952696	(7342863)	+	L1ME1	LINE/L1	1812	1904	(4496)	2775879
4459	6.0	4.0	0.3	chr3	190952697	190953281	(7342278)	C	LTR14B	LTR/ERVK	(1)	607	1	2775884
180	33.7	5.5	3.7	chr3	194768612	194768719	(3526840)	C	L2b	LINE/L2	(0)	3375	3266	2781815
182	32.3	4.8	4.8	chr3	194768931	194769034	(3526525)	C	L3	LINE/CR1	(15)	4084	3981	2781816
308	32.9	3.5	0.7	chr3	196144476	196144613	(2150946)	+	L2c	LINE/L2	3049	3190	(197)	2784334
232	23.1	17.1	0.0	chr3	196287008	196287117	(2008442)	C	MIR3	SINE/MIR	(50)	158	20	2784658
210	25.9	18.2	2.6	chr3	196658419	196658533	(1637026)	C	MIR	SINE/MIR	(113)	149	13	2785490
2272	9.1	0.0	1.3	chr3	196658684	196658991	(1636568)	+	AluSx	SINE/Alu	1	304	(8)	2785491
5397	23.7	4.2	5.0	chr3	197246810	197248473	(1047086)	C	HERVIP10F-int	LTR/ERV1	(6038)	1565	1	2786575
1280	26.3	12.2	2.3	chr3	197730138	197730573	(564986)	+	MLT1K	LTR/ERVL-MaLR	19	503	(92)	2787415
2235	3.4	0.0	0.8	chr3	197730584	197730848	(564711)	C	LTR14A	LTR/ERVK	(78)	266	4	2787416
83	33.9	2.5	1.5	chr4	660817	661213	(189553342)	+	(TGGA)n	Simple_repeat	1	407	(0)	2789377
395	23.7	1.4	3.4	chr4	727059	727223	(189487332)	C	L1M5	LINE/L1	(534)	5825	5662	2789455
2025	12.5	0.4	0.4	chr4	727234	727538	(189487017)	C	AluSc8	SINE/Alu	(0)	311	2	2789456
2622	26.2	12.2	1.4	chr4	1486343	1486950	(188727605)	+	L2a	LINE/L2	1944	2630	(789)	2790242
19	18.9	10.1	3.3	chr4	1579168	1579276	(188635279)	+	(GCCCCT)n	Simple_repeat	1	120	(0)	2790314
291	28.9	13.3	1.3	chr4	1579509	1579666	(188634889)	+	MIRb	SINE/MIR	20	199	(69)	2790315
11	9.5	11.8	0.0	chr4	2073332	2073365	(188141190)	+	(CCCTCAC)n	Simple_repeat	1	38	(0)	2791054
201	31.9	1.4	0.0	chr4	4641562	4641633	(185572922)	C	MIR	SINE/MIR	(123)	139	67	2795133
2553	5.1	0.0	0.3	chr4	6185366	6185659	(184028896)	+	AluY	SINE/Alu	1	293	(18)	2797900
635	26.7	2.7	3.2	chr4	6185660	6185780	(184028775)	C	MER5A	DNA/hAT-Charlie	(62)	127	2	2797899
423	16.5	6.0	0.0	chr4	6951763	6951873	(183262682)	C	L1ME3	LINE/L1	(2573)	3573	3446	2799370
3720	12.5	1.1	2.2	chr4	8441729	8442282	(181772273)	C	LTR14	LTR/ERVK	(0)	548	1	2801753
1999	15.6	5.8	1.1	chr4	15078607	15078982	(175135573)	+	L1MB1	LINE/L1	6471	6865	(5)	2812043
354	29.9	0.0	10.7	chr4	15458478	15458608	(174755947)	+	L2c	LINE/L2	3271	3387	(0)	2812696
211	36.4	1.5	0.0	chr4	15458672	15458737	(174755818)	C	MIR	SINE/MIR	(173)	89	23	2812697
434	32.0	11.4	2.7	chr4	16916987	16917297	(173297258)	+	L2b	LINE/L2	2831	3163	(212)	2815203
229	30.8	4.0	2.4	chr4	17681032	17681154	(172533401)	C	MIRc	SINE/MIR	(14)	254	130	2816713
190	32.0	9.4	1.6	chr4	17681281	17681407	(172533148)	C	MIR1_Amn	SINE/MIR	(92)	138	1	2816714
480	30.8	2.0	1.4	chr4	19603531	19603678	(170610877)	C	MIR	SINE/MIR	(7)	255	107	2819772
1243	25.8	6.7	4.8	chr4	19603687	19604167	(170610388)	C	MLT1D	LTR/ERVL-MaLR	(8)	497	7	2819773
1998	7.3	1.2	18.1	chr4	27662390	27662804	(162551751)	+	LTR14A	LTR/ERVK	1	344	(0)	2832932
1015	31.0	10.8	1.8	chr4	33516006	33516458	(156698097)	C	MLT1E3	LTR/ERVL-MaLR	(2)	678	180	2840883
3973	11.3	0.5	4.9	chr4	33516510	33517140	(156697415)	C	LTR14B	LTR/ERVK	(0)	608	6	2840884
14	11.7	8.1	0.0	chr4	37826624	37826660	(152387895)	+	(CTCCGC)n	Simple_repeat	1	40	(0)	2846764
13	19.6	0.0	0.0	chr4	39365944	39365973	(150848582)	+	(CCTT)n	Simple_repeat	1	30	(0)	2849468
236	32.5	10.7	1.7	chr4	42481391	42481509	(147733046)	C	MIR3	SINE/MIR	(27)	181	51	2855696
311	22.9	4.7	9.6	chr4	42481700	42481834	(147732721)	+	Charlie4z	DNA/hAT-Charlie	21	148	(19)	2855697
2316	8.5	0.3	8.3	chr4	43472457	43472828	(146741727)	+	LTR14A	LTR/ERVK	1	342	(2)	2857020
18789	16.4	3.5	0.9	chr4	43472831	43477399	(146737156)	C	L1M1	LINE/L1	(2864)	4701	13	2857022
2794	13.3	7.1	9.5	chr4	45640290	45640897	(144573658)	+	LTR14B	LTR/ERVK	17	608	(0)	2859791
314	27.0	7.5	0.7	chr4	45640933	45641081	(144573474)	C	L1MC4	LINE/L1	(5276)	939	780	2859786
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
2651	10.8	5.1	3.1	chr4	54921368	54921786	(135292769)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2870103
409	30.7	2.3	0.0	chr4	56466864	56466990	(133747565)	C	MIRc	SINE/MIR	(102)	166	37	2872653
15	13.7	0.0	5.6	chr4	56908351	56908386	(133306169)	+	(CGG)n	Simple_repeat	1	36	(0)	2873605
1981	11.4	0.0	6.3	chr4	57627625	57627956	(132586599)	+	AluYm1	SINE/Alu	15	311	(0)	2874736
3795	9.4	3.6	5.0	chr4	63521085	63521699	(126692856)	+	LTR14B	LTR/ERVK	3	608	(0)	2882094
9752	18.8	3.0	3.3	chr4	63521700	63522141	(126692414)	+	L1MCa	LINE/L1	4714	5146	(1175)	2882090
5975	13.4	1.7	1.1	chr4	68281479	68282426	(121932129)	C	LTR5_Hs	LTR/ERVK	(14)	954	1	2888128
222	32.6	10.8	1.4	chr4	72988434	72988710	(117225845)	+	L2c	LINE/L2	1588	1893	(1526)	2894191
285	24.7	3.0	2.0	chr4	72988753	72988851	(117225704)	+	L2-3_Crp	LINE/L2	728	827	(1269)	2894192
373	31.7	13.9	1.8	chr4	72988944	72989283	(117225272)	+	L2c	LINE/L2	2145	2532	(887)	2894191
11910	10.3	1.5	2.2	chr4	73544153	73547515	(116667040)	+	L1P3	LINE/L1	1	3378	(3083)	2895045
419	26.4	4.9	11.7	chr4	75514833	75515141	(114699414)	C	L2c	LINE/L2	(5)	3382	3096	2897554
1237	18.0	15.4	0.8	chr4	75882538	75882792	(114331763)	C	AluJr4	SINE/Alu	(13)	299	1	2898301
994	25.5	12.6	14.1	chr4	76220843	76221335	(113993220)	+	LTR105_Mam	LTR/ERVL	13	513	(87)	2898922
5130	11.7	1.3	0.4	chr4	76225298	76226055	(113988500)	C	L1PB1	LINE/L1	(1896)	4966	4202	2898931
3268	13.1	3.5	9.3	chr4	76226056	76226687	(113987868)	C	LTR14B	LTR/ERVK	(0)	608	15	2898932
16	4.5	0.0	0.0	chr4	77994798	77994820	(112219735)	+	(AACA)n	Simple_repeat	1	23	(0)	2901533
13	19.2	0.0	0.0	chr4	77994821	77994827	(112219728)	+	(AACC)n	Simple_repeat	1	30	(0)	2901534
448	9.8	7.5	5.4	chr4	78418468	78418559	(111795996)	+	AluJr	SINE/Alu	203	296	(16)	2902120
18	17.4	7.4	1.7	chr4	82107498	82107576	(108106979)	+	GA-rich	Low_complexity	1	83	(0)	2907116
16	0.0	0.0	0.0	chr4	82107838	82107854	(108106701)	+	(A)n	Simple_repeat	1	17	(0)	2907117
561	14.1	0.0	0.0	chr4	85170565	85170663	(105043892)	+	L1MA5A	LINE/L1	6196	6294	(3)	2912194
1045	25.0	10.8	6.2	chr4	85170739	85171341	(105043214)	+	L1ME3E	LINE/L1	5473	6118	(125)	2912195
2311	13.1	8.9	0.5	chr4	86388992	86389383	(103825172)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2913766
332	34.4	0.0	0.0	chr4	86389587	86389676	(103824879)	+	MER20B	DNA/hAT-Charlie	114	203	(580)	2913767
472	30.4	3.7	3.7	chr4	86389698	86389912	(103824643)	+	MER20B	DNA/hAT-Charlie	291	505	(278)	2913768
1924	16.9	3.8	4.0	chr4	86833710	86834025	(103380530)	C	L1MB7	LINE/L1	(16)	6168	5859	2914427
2155	17.2	7.7	0.5	chr4	86834026	86834422	(103380133)	+	MSTB1	LTR/ERVL-MaLR	5	432	(0)	2914428
1971	11.7	10.4	4.2	chr4	87402106	87402513	(102812042)	C	LTR14B	LTR/ERVK	(0)	608	1	2915452
42000	6.5	2.3	0.4	chr4	87402711	87408386	(102806169)	C	HERVK14-int	LTR/ERVK	(199)	5897	1	2915453
2084	9.7	10.2	4.2	chr4	87408387	87408795	(102805760)	C	LTR14B	LTR/ERVK	(0)	608	1	2915453
228	35.1	1.6	2.0	chr4	88591428	88591563	(101622992)	+	MamTip2	DNA/hAT-Tip100	4	151	(154)	2917429
500	28.6	20.5	2.2	chr4	88653132	88653956	(101560599)	C	L2b	LINE/L2	(3)	3372	2370	2917512
16	23.3	2.2	0.0	chr4	89307845	89307889	(100906666)	+	(GCC)n	Simple_repeat	1	46	(0)	2918454
19	14.8	0.0	2.5	chr4	89308014	89308053	(100906502)	+	(GGC)n	Simple_repeat	1	40	(0)	2918455
30	3.5	0.0	0.0	chr4	90128488	90128517	(100086038)	+	(TG)n	Simple_repeat	1	30	(0)	2919580
6528	21.2	2.4	2.0	chr4	90569374	90571767	(99642788)	+	L1PA17	LINE/L1	83	1703	(5232)	2920118
20097	14.9	3.0	1.3	chr4	90795318	90800116	(99414439)	C	L1PA13	LINE/L1	(1822)	4944	41	2920395
661	26.0	9.9	6.2	chr4	93458287	93458528	(96756027)	C	MLT1G3	LTR/ERVL-MaLR	(110)	485	234	2923673
190	35.9	10.9	4.3	chr4	94914525	94914806	(95299749)	C	L2b	LINE/L2	(2291)	1128	826	2925746
4244	28.6	13.7	7.2	chr4	95257136	95257203	(94957352)	+	L2	LINE/L2	2830	2894	(525)	2926173
1273	19.5	0.4	0.9	chr4	95257204	95257429	(94957126)	+	AluJb	SINE/Alu	84	308	(4)	2926178
3605	5.2	0.5	0.0	chr4	96930539	96930978	(93283577)	+	MLT2A1	LTR/ERVL	1	442	(2)	2928295
1508	26.0	7.0	7.4	chr4	97088454	97089010	(93125545)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	6	2928502
2141	13.9	0.0	0.0	chr4	97769931	97770231	(92444324)	+	AluSx1	SINE/Alu	3	303	(9)	2929321
1113	28.4	15.6	5.8	chr4	97770232	97771022	(92443533)	C	L2a	LINE/L2	(174)	3252	2337	2929320
2709	25.8	10.6	12.2	chr4	97978677	97979604	(92234951)	+	MLT1H1-int	LTR/ERVL-MaLR	352	1292	(117)	2929532
247	26.1	3.1	4.6	chr4	98516441	98516578	(91697977)	+	MLT1O	LTR/ERVL-MaLR	401	599	(11)	2930265
2612	15.6	0.4	4.2	chr4	98516579	98517052	(91697503)	+	MSTB2	LTR/ERVL-MaLR	1	456	(1)	2930266
2604	10.7	6.8	7.7	chr4	99801090	99801711	(90412844)	C	MER4B	LTR/ERV1	(0)	900	4	2932134
228	32.5	2.4	3.1	chr4	101293037	101293163	(88921392)	+	Tigger16b	DNA/TcMar-Tigger	148	273	(63)	2934162
13	20.7	2.1	4.1	chr4	102827165	102827212	(87387343)	+	(CGCGCC)n	Simple_repeat	1	49	(0)	2936199
1746	17.4	0.6	11.5	chr4	104946907	104947315	(85267240)	+	MLT1A0	LTR/ERVL-MaLR	1	364	(1)	2938850
2389	16.2	4.2	1.2	chr4	105718185	105718597	(84495958)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2939899
1245	20.1	2.0	0.7	chr4	106397081	106397371	(83817184)	+	L1M4c	LINE/L1	1010	1304	(5080)	2940776
1915	22.7	7.5	3.1	chr4	106397335	106397820	(83816735)	C	L1M4c	LINE/L1	(5858)	526	18	2940774
2499	7.3	10.2	1.7	chr4	107328005	107328454	(82886101)	+	LTR14B	LTR/ERVK	1	608	(0)	2941935
42716	5.7	1.0	0.4	chr4	107328455	107333874	(82880681)	+	HERVK14-int	LTR/ERVK	1	5465	(631)	2941935
2316	8.7	13.8	0.8	chr4	107334346	107334793	(82879762)	+	LTR14B	LTR/ERVK	1	608	(0)	2941937
7703	20.4	4.0	1.4	chr4	107334795	107336566	(82877989)	C	L1PA15-16	LINE/L1	(2136)	4713	2892	2941933
1669	17.1	4.6	2.1	chr4	107702013	107702395	(82512160)	+	L1M4	LINE/L1	5327	5719	(465)	2942406
9427	15.4	3.3	3.6	chr4	107702395	107704670	(82509885)	C	L1MA8	LINE/L1	(185)	7525	5254	2942407
364	31.5	4.5	0.0	chr4	108363238	108363364	(81851191)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	430	2943362
1347	27.2	8.2	1.9	chr4	109774121	109774658	(80439897)	C	L2a	LINE/L2	(8)	3418	2844	2945524
347	29.1	0.0	0.0	chr4	109774666	109774751	(80439804)	C	L2a	LINE/L2	(1190)	2229	2144	2945524
1095	25.3	13.0	2.0	chr4	111690603	111690897	(78523658)	+	LTR16B	LTR/ERVL	1	332	(131)	2948120
2230	20.0	4.3	1.1	chr4	112473487	112474008	(77740547)	+	MER74A	LTR/ERVL	20	558	(0)	2949234
1263	23.6	8.0	3.3	chr4	112474019	112474605	(77739950)	C	L1MEc	LINE/L1	(3802)	2517	1905	2949230
5384	13.8	0.3	1.0	chr4	112493061	112493567	(77720988)	+	L1PA16	LINE/L1	5654	6155	(11)	2949249
15	14.4	0.0	0.0	chr4	112493569	112493592	(77720963)	+	(AT)n	Simple_repeat	1	24	(0)	2949252
451	36.8	4.7	4.1	chr4	113993448	113993762	(76220793)	C	MER115	DNA/hAT-Tip100	(146)	547	231	2951540
15386	19.5	2.4	1.6	chr4	114251554	114258231	(75956324)	+	L1PA17	LINE/L1	343	6919	(16)	2951855
455	29.9	11.5	1.7	chr4	122921914	122922148	(67292407)	C	MIRb	SINE/MIR	(1)	267	7	2963233
796	32.2	4.9	2.2	chr4	128601304	128601662	(61612893)	C	MamRTE1	LINE/RTE-BovB	(331)	3481	3113	2970966
4685	6.0	0.8	0.0	chr4	129080873	129081454	(61133101)	+	LTR14C	LTR/ERVK	1	587	(0)	2971728
2092	12.2	11.9	2.6	chr4	129081455	129081745	(61132810)	C	MSTA	LTR/ERVL-MaLR	(89)	339	1	2971727
5640	18.8	7.3	0.9	chr4	135194021	135195151	(55019404)	+	MSTB-int	LTR/ERVL-MaLR	443	1651	(0)	2978990
2116	15.9	8.2	0.0	chr4	135195152	135195542	(55019013)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2978990
618	28.4	21.5	4.3	chr4	138894570	138894992	(51319563)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	10	2983515
12	18.3	0.0	3.0	chr4	138895180	138895212	(51319343)	+	(TCTTT)n	Simple_repeat	1	33	(0)	2983516
917	21.5	4.8	9.5	chr4	139214206	139214488	(51000067)	C	MLT1B	LTR/ERVL-MaLR	(121)	269	1	2984188
280	25.8	0.0	0.0	chr4	139214497	139214558	(50999997)	C	L1M5	LINE/L1	(658)	5584	5523	2984189
2366	10.8	0.0	0.0	chr4	139433094	139433390	(50781165)	C	AluSx	SINE/Alu	(15)	297	1	2984630
3370	17.1	0.7	1.7	chr4	139433418	139433491	(50781064)	C	L1M1	LINE/L1	(6955)	610	539	2984627
2526	7.3	0.0	0.0	chr4	139433492	139433792	(50780763)	+	AluSg7	SINE/Alu	1	301	(8)	2984631
317	34.1	2.1	1.4	chr4	139764482	139764621	(50449934)	+	MIRc	SINE/MIR	88	228	(40)	2985215
1751	16.6	0.6	3.3	chr4	139876009	139876339	(50338216)	+	MER33	DNA/hAT-Charlie	3	324	(0)	2985388
508	26.1	14.5	2.8	chr4	141449530	141449742	(48764813)	C	L2a	LINE/L2	(0)	3426	3185	2987693
539	29.6	9.3	2.6	chr4	141449795	141450023	(48764532)	C	MLT1J	LTR/ERVL-MaLR	(262)	250	5	2987694
18	4.8	0.0	0.0	chr4	147547840	147547861	(42666694)	+	(T)n	Simple_repeat	1	22	(0)	2995751
1913	17.7	0.0	0.0	chr4	147547875	147548174	(42666381)	C	AluJb	SINE/Alu	(12)	300	1	2995752
369	29.4	4.2	2.2	chr4	148089347	148089485	(42125070)	+	MIR	SINE/MIR	113	254	(8)	2996678
261	24.7	7.9	2.1	chr4	148109305	148109399	(42105156)	+	L2a	LINE/L2	3326	3426	(0)	2996701
20	16.0	0.0	0.0	chr4	149164732	149164766	(41049789)	+	(AC)n	Simple_repeat	1	35	(0)	2998058
2965	22.5	4.0	5.3	chr4	153047502	153048041	(37166514)	C	L1ME3	LINE/L1	(253)	5909	5343	3003934
989	13.6	0.0	0.0	chr4	153048042	153048188	(37166367)	+	MSTB2	LTR/ERVL-MaLR	1	147	(310)	3003936
5583	11.8	2.4	0.9	chr4	153048190	153049046	(37165509)	C	L1PA16	LINE/L1	(0)	6166	5297	3003937
779	25.3	3.2	0.0	chr4	153206127	153206308	(37008247)	C	MER21C	LTR/ERVL	(105)	833	646	3004227
9754	19.2	9.6	2.4	chr4	153332665	153333590	(36880965)	+	L1MD2	LINE/L1	5326	6349	(10)	3004444
800	21.8	11.8	2.6	chr4	153333651	153333918	(36880637)	+	MER2	DNA/TcMar-Tigger	2	297	(48)	3004449
3866	6.9	1.0	0.2	chr4	153688368	153688872	(36525683)	C	MER9a3	LTR/ERVK	(0)	512	4	3005064
33703	5.8	0.3	0.2	chr4	153688875	153693253	(36521302)	C	HERVK9-int	LTR/ERVK	(0)	6021	1638	3005064
6832	9.8	1.4	1.8	chr4	153694537	153696580	(36517975)	C	L1MA3	LINE/L1	(0)	6305	4271	3005065
2506	9.5	2.1	2.9	chr4	156838728	156838836	(33375719)	+	THE1C	LTR/ERVL-MaLR	1	107	(268)	3009317
2015	7.3	0.3	23.3	chr4	156838837	156839283	(33375272)	C	LTR14A	LTR/ERVK	(0)	344	1	3009318
867	17.0	1.4	1.4	chr4	164528649	164528795	(25685760)	+	AluJr	SINE/Alu	137	283	(29)	3019538
50	5.4	0.0	0.0	chr4	164528796	164528854	(25685701)	+	(AAAT)n	Simple_repeat	1	59	(0)	3019539
204	29.2	0.0	2.0	chr4	164528975	164529023	(25685532)	+	L2b	LINE/L2	3303	3350	(25)	3019540
2392	10.6	0.3	0.0	chr4	164855773	164856075	(25358480)	C	AluSx1	SINE/Alu	(8)	304	1	3020027
1033	20.6	14.2	11.8	chr4	166568646	166569042	(23645513)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	3022528
2563	24.2	15.8	3.2	chr4	166569043	166569410	(23645145)	C	L1MC4a	LINE/L1	(539)	7343	6870	3022527
2292	15.7	4.4	0.0	chr4	166918734	166919146	(23295409)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3022945
66	0.0	0.0	0.0	chr4	168816818	168816873	(21397682)	+	(GT)n	Simple_repeat	1	56	(0)	3025384
15	20.5	3.5	8.0	chr4	173168705	173168789	(17045766)	+	G-rich	Low_complexity	1	88	(0)	3031238
246	33.1	7.9	7.9	chr4	173265958	173265975	(16948580)	C	MIR3	SINE/MIR	(3)	205	193	3031374
2180	14.4	0.0	0.6	chr4	173265976	173266287	(16948268)	+	AluSz6	SINE/Alu	1	310	(2)	3031375
246	31.3	13.7	2.9	chr4	173266288	173266458	(16948097)	C	MIR3	SINE/MIR	(16)	192	8	3031374
548	21.8	4.3	0.0	chr4	177079641	177079774	(13134781)	+	MIR	SINE/MIR	122	268	(0)	3036403
2254	14.4	5.2	5.6	chr4	177400366	177400793	(12813762)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3036873
8667	13.3	1.2	1.2	chr4	178644881	178646615	(11567940)	C	L1MA3	LINE/L1	(63)	6242	4492	3038470
4028	10.1	3.8	0.2	chr4	178646616	178647198	(11567357)	C	LTR14B	LTR/ERVK	(0)	608	4	3038471
270	37.6	6.7	3.9	chr4	180116834	180117193	(10097362)	+	L2c	LINE/L2	2920	3290	(97)	3040347
1255	15.8	7.0	0.4	chr4	181129187	181129428	(9085127)	C	THE1C	LTR/ERVL-MaLR	(2)	373	115	3041680
3487	8.9	8.6	1.8	chr4	181129431	181129991	(9084564)	C	LTR14B	LTR/ERVK	(0)	608	6	3041681
417	13.7	6.3	2.1	chr4	182809967	182810572	(7403983)	+	(AC)n	Simple_repeat	1	628	(0)	3043918
2463	16.1	4.8	0.0	chr4	183788421	183788855	(6425700)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	3045617
936	26.8	1.2	1.6	chr4	183788856	183789044	(6425511)	+	MIR	SINE/MIR	74	262	(0)	3045616
17	12.3	0.0	5.1	chr4	183905199	183905237	(6309318)	+	(CCCAGG)n	Simple_repeat	1	39	(0)	3045775
345	28.1	7.2	1.7	chr4	184294212	184294368	(5920187)	+	MIRb	SINE/MIR	26	182	(86)	3046319
2683	21.4	1.5	0.4	chr4	184294382	184294916	(5919639)	+	MER74A	LTR/ERVL	6	546	(12)	3046320
2155	8.8	10.0	3.0	chr4	184909081	184909485	(5305070)	C	LTR14B	LTR/ERVK	(0)	608	1	3047370
912	18.3	4.4	0.0	chr4	184933618	184933770	(5280785)	C	AluJb	SINE/Alu	(16)	296	137	3047405
1339	23.9	15.6	4.9	chr4	186141572	186142450	(4072105)	+	MLT1H1-int	LTR/ERVL-MaLR	332	1487	(2)	3049268
2501	6.8	6.4	2.1	chr4	186364096	186364424	(3850131)	+	LTR14A	LTR/ERVK	1	344	(0)	3049561
1667	29.6	13.6	1.9	chr4	186364440	186365382	(3849173)	+	L2	LINE/L2	947	2016	(1403)	3049562
799	30.7	2.6	0.3	chr4	186832042	186832374	(3382181)	+	ERVL-E-int	LTR/ERVL	3622	3962	(1264)	3050209
1580	31.7	6.8	4.5	chr4	186832371	186833270	(3381285)	+	ERVL-E-int	LTR/ERVL	4117	5159	(598)	3050209
1602	17.3	4.5	0.9	chr4	188098202	188098522	(2116033)	C	MLT1A0	LTR/ERVL-MaLR	(32)	333	1	3052006
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
21	28.2	1.0	5.0	chr5	53534	53639	(181484620)	+	G-rich	Low_complexity	1	101	(0)	3055017
17	29.7	0.0	2.9	chr5	53889	53957	(181484302)	+	G-rich	Low_complexity	1	69	(0)	3055018
211	34.9	0.0	0.0	chr5	2760049	2760114	(178778145)	+	L2a	LINE/L2	3361	3426	(0)	3057617
602	25.0	1.2	7.9	chr5	6593123	6593160	(174945099)	C	MIR	SINE/MIR	(28)	234	204	3062075
4313	7.1	5.1	0.2	chr5	6593161	6593738	(174944521)	C	LTR14B	LTR/ERVK	(0)	608	1	3062076
2123	14.2	1.5	2.2	chr5	7354428	7354831	(174183428)	C	L1MC1	LINE/L1	(276)	6057	5657	3063050
3552	12.2	1.0	4.7	chr5	7354832	7355453	(174182806)	C	LTR14B	LTR/ERVK	(0)	608	10	3063051
4930	21.0	6.2	2.5	chr5	14081706	14082427	(167455832)	C	Charlie1a	DNA/hAT-Charlie	(698)	757	3	3071749
973	28.1	4.9	1.4	chr5	14082483	14082778	(167455481)	C	LTR16C	LTR/ERVL	(4)	485	179	3071753
478	29.6	2.1	9.8	chr5	14082810	14083192	(167455067)	+	L2a	LINE/L2	3038	3426	(0)	3071754
1602	19.2	6.4	6.4	chr5	17136034	17136439	(164401820)	C	MLT1A1	LTR/ERVL-MaLR	(2)	406	1	3076295
1606	19.9	5.4	6.4	chr5	23039992	23040383	(158497876)	+	MLT1B	LTR/ERVL-MaLR	1	388	(2)	3084233
13679	9.8	0.9	0.7	chr5	24305267	24308071	(157230188)	C	L1PA7	LINE/L1	(1)	6153	3347	3085925
2674	5.1	2.6	0.0	chr5	24308072	24308406	(157229853)	C	LTR14A	LTR/ERVK	(0)	344	1	3085926
558	33.4	7.9	4.3	chr5	26761038	26761428	(154776831)	+	L2	LINE/L2	246	651	(2768)	3088958
2219	18.1	1.5	4.5	chr5	27510063	27510322	(154027937)	+	L1MA9	LINE/L1	5837	6087	(225)	3090007
781	17.7	3.7	0.0	chr5	27510323	27510452	(154027807)	C	FLAM_C	SINE/Alu	(8)	135	1	3090008
2219	18.1	1.5	4.5	chr5	27510453	27510678	(154027581)	+	L1MA9	LINE/L1	6088	6308	(4)	3090007
3861	10.2	2.0	4.6	chr5	27964476	27965081	(153573178)	+	LTR14B	LTR/ERVK	19	608	(0)	3090569
346	16.9	0.0	0.0	chr5	27965083	27965141	(153573118)	C	L1PREC2	LINE/L1	(6717)	68	10	3090567
2461	11.7	0.2	2.5	chr5	28547612	28548117	(152990142)	+	LTR14B	LTR/ERVK	3	608	(0)	3091282
10455	4.3	0.5	0.3	chr5	31395307	31396628	(150141631)	C	HERV17-int	LTR/ERV1	(4872)	3754	2430	3094872
2530	3.8	0.7	0.3	chr5	31557354	31557646	(149980613)	+	AluY	SINE/Alu	1	294	(17)	3095112
2455	8.0	0.0	0.3	chr5	31557845	31558146	(149980113)	+	AluSx3	SINE/Alu	2	302	(9)	3095113
2410	4.4	0.4	0.0	chr5	32175493	32175793	(149362466)	C	AluY	SINE/Alu	(0)	311	6	3096325
1839	16.1	0.0	1.6	chr5	32217468	32217777	(149320482)	C	AluJr	SINE/Alu	(7)	305	1	3096427
439	30.5	8.4	6.4	chr5	32671791	32672005	(148866254)	C	ERVL-E-int	LTR/ERVL	(3200)	2467	2244	3097303
2741	5.6	1.8	0.0	chr5	32672006	32672343	(148865916)	C	LTR14A	LTR/ERVK	(0)	344	1	3097304
282	24.0	2.6	1.3	chr5	33033651	33033726	(148504533)	C	LTR33	LTR/ERVL	(0)	515	439	3097786
348	30.3	5.2	3.9	chr5	33033811	33034014	(148504245)	C	LTR33	LTR/ERVL	(252)	268	76	3097786
1615	12.5	0.7	9.1	chr5	34653528	34653823	(146884436)	+	AluJb	SINE/Alu	4	274	(38)	3100169
29	15.3	5.2	2.5	chr5	34653824	34653855	(146884404)	+	A-rich	Low_complexity	1	33	(0)	3100170
27	0.0	0.0	0.0	chr5	34653856	34653881	(146884378)	+	(AAGG)n	Simple_repeat	1	26	(0)	3100171
24	10.3	5.8	7.6	chr5	34653882	34653927	(146884332)	+	A-rich	Low_complexity	37	84	(0)	3100172
2177	17.2	5.2	0.2	chr5	35294903	35295311	(146242948)	C	MSTB1	LTR/ERVL-MaLR	(12)	420	2	3101216
281	26.0	5.7	4.8	chr5	35295425	35295529	(146242730)	C	L1ME2	LINE/L1	(120)	6122	6017	3101217
1337	21.5	4.3	0.7	chr5	35617351	35617638	(145920621)	C	AluSx3	SINE/Alu	(11)	300	2	3101644
9713	16.0	1.1	0.4	chr5	39065448	39067086	(142471173)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1651	1	3107035
4062	10.5	0.7	4.4	chr5	42099748	42100377	(139437882)	+	LTR14B	LTR/ERVK	3	608	(0)	3111219
14635	18.1	4.2	2.3	chr5	42100378	42100435	(139437824)	C	L1PREC2	LINE/L1	(1100)	7041	6976	3111218
26	0.0	0.0	0.0	chr5	42100436	42100460	(139437799)	+	(T)n	Simple_repeat	1	25	(0)	3111220
14635	18.1	4.2	2.3	chr5	42100461	42100822	(139437437)	C	L1PREC2	LINE/L1	(1166)	6975	6592	3111218
549	34.3	5.0	0.8	chr5	51138955	51139221	(130399038)	C	L2a	LINE/L2	(33)	3393	3115	3117388
353	32.3	12.4	1.0	chr5	51139335	51139534	(130398725)	C	L2a	LINE/L2	(420)	2999	2774	3117388
3712	24.6	8.4	5.3	chr5	53771091	53773073	(127765186)	+	L1M1	LINE/L1	460	3079	(4486)	3120706
365	19.1	28.5	0.5	chr5	54304206	54304377	(127233882)	+	MIR	SINE/MIR	18	260	(8)	3121521
834	26.1	14.9	1.6	chr5	55423163	55423733	(126114526)	C	L2a	LINE/L2	(0)	3426	2661	3123212
224	32.6	4.3	0.0	chr5	57692676	57692764	(123845495)	+	L3b	LINE/CR1	5066	5158	(74)	3127122
460	25.6	8.0	6.9	chr5	61370431	61370762	(120167497)	C	L1ME4c	LINE/L1	(179)	651	316	3132170
21	0.0	0.0	0.0	chr5	62143529	62143551	(119394708)	+	(T)n	Simple_repeat	1	23	(0)	3133252
2033	14.2	1.9	1.6	chr5	64772344	64772654	(116765605)	+	AluSx	SINE/Alu	1	312	(0)	3136888
2430	8.9	0.0	0.0	chr5	64772658	64772949	(116765310)	+	AluSx3	SINE/Alu	3	294	(17)	3136889
253	29.4	13.1	4.8	chr5	66143636	66143760	(115394499)	+	L2c	LINE/L2	3290	3426	(0)	3139014
13	17.0	3.0	0.0	chr5	66144345	66144377	(115393882)	+	G-rich	Low_complexity	1	34	(0)	3139018
17	18.3	0.0	0.0	chr5	66144385	66144421	(115393838)	+	(CGGCTT)n	Simple_repeat	1	37	(0)	3139019
2281	13.4	2.1	1.3	chr5	67068234	67068611	(114469648)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3140329
22	3.3	0.0	3.0	chr5	67910526	67910558	(113627701)	+	(CAAA)n	Simple_repeat	1	33	(0)	3141389
617	30.6	7.7	0.4	chr5	67910973	67911202	(113627057)	C	MIR	SINE/MIR	(2)	260	13	3141390
248	28.6	2.1	3.2	chr5	68689500	68689593	(112848666)	+	MIR3	SINE/MIR	63	155	(53)	3142609
204	28.9	0.0	0.0	chr5	68689797	68689841	(112848418)	+	MIR3	SINE/MIR	144	188	(20)	3142609
382	28.3	5.5	1.7	chr5	69189834	69190009	(112348250)	+	MIRb	SINE/MIR	45	227	(41)	3143460
2190	16.1	1.5	3.5	chr5	69468612	69469011	(112069248)	C	LOR1b	LTR/ERV1	(0)	461	70	3144118
2269	17.1	1.6	1.8	chr5	69469156	69469512	(112068747)	+	MSTB	LTR/ERVL-MaLR	1	362	(64)	3144119
2049	18.0	3.5	3.0	chr5	72264436	72264894	(109273365)	+	MLT1C	LTR/ERVL-MaLR	3	463	(4)	3148710
2188	21.8	7.4	3.3	chr5	73144802	73145131	(108393128)	C	MLT1F1	LTR/ERVL-MaLR	(225)	344	1	3150072
298	23.9	7.1	1.1	chr5	73145372	73145464	(108392795)	C	MER5A	DNA/hAT-Charlie	(47)	142	44	3150074
188	26.5	2.0	2.0	chr5	73145488	73145537	(108392722)	C	OldhAT1	DNA/hAT-Ac	(2584)	264	215	3150075
1441	26.3	7.2	1.8	chr5	76310043	76310603	(105227656)	C	L2a	LINE/L2	(1)	3425	2811	3154797
238	19.0	0.0	1.7	chr5	76310636	76310694	(105227565)	C	L2a	LINE/L2	(737)	2682	2625	3154797
397	29.8	5.5	4.1	chr5	78896271	78896538	(102641721)	+	MamGypLTR2b	LTR/Gypsy	521	920	(2)	3158750
740	22.3	11.6	0.0	chr5	78896772	78897000	(102641259)	C	MER20B	DNA/hAT-Charlie	(6)	777	519	3158751
310	35.0	10.8	2.6	chr5	78945673	78946054	(102592205)	+	L2c	LINE/L2	2921	3337	(50)	3158816
404	30.4	2.0	3.9	chr5	81963841	81963994	(99574265)	C	MIRc	SINE/MIR	(100)	168	18	3163920
1956	18.6	3.5	4.5	chr5	82918629	82919090	(98619169)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	3165293
2305	10.6	2.2	1.4	chr5	84297198	84297502	(97240757)	+	L1PA10	LINE/L1	5309	5619	(549)	3167061
4164	7.3	3.8	2.4	chr5	84297504	84298094	(97240165)	C	LTR14B	LTR/ERVK	(2)	606	7	3167063
652	19.7	8.2	3.9	chr5	84630513	84630782	(96907477)	C	MSTB	LTR/ERVL-MaLR	(48)	378	59	3167523
1083	36.7	8.2	6.3	chr5	85085182	85086622	(96451637)	+	L2a	LINE/L2	757	2226	(1193)	3168100
1263	22.1	7.6	0.0	chr5	86617105	86617407	(94920852)	C	MER90	LTR/ERV1	(242)	333	6	3170029
12	5.0	0.0	4.3	chr5	86617668	86617690	(94920569)	+	(AAGA)n	Simple_repeat	1	23	(0)	3170030
17	28.8	1.6	1.6	chr5	87267811	87267873	(94270386)	+	(CTCC)n	Simple_repeat	1	64	(0)	3170894
11	32.9	0.0	0.0	chr5	87267989	87268037	(94270222)	+	(GCAGCG)n	Simple_repeat	1	49	(0)	3170895
858	28.1	15.3	8.5	chr5	87457160	87457335	(94080924)	+	LTR16E1	LTR/ERVL	2	170	(368)	3171157
30	3.1	0.0	0.0	chr5	87457336	87457368	(94080891)	+	(TATCTA)n	Simple_repeat	1	33	(0)	3171158
858	28.1	15.3	8.5	chr5	87457369	87457674	(94080585)	+	LTR16E1	LTR/ERVL	171	523	(15)	3171157
2159	25.8	11.5	9.6	chr5	87521326	87522246	(94016013)	+	L1MEj	LINE/L1	654	1562	(598)	3171212
2651	6.5	1.2	0.0	chr5	88380384	88380723	(93157536)	+	LTR14A	LTR/ERVK	1	344	(0)	3172253
10796	13.1	0.6	0.5	chr5	92318738	92320366	(89217893)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	3177323
370	32.1	7.3	0.7	chr5	93155207	93155347	(88382912)	C	L2a	LINE/L2	(5)	3421	3271	3178336
30	17.5	1.7	0.0	chr5	93603773	93603830	(87934429)	+	(CA)n	Simple_repeat	1	59	(0)	3178851
13	24.1	0.0	2.4	chr5	93604322	93604362	(87933897)	+	G-rich	Low_complexity	1	41	(0)	3178852
17	31.4	1.4	1.4	chr5	95961739	95961810	(85576449)	+	(GCC)n	Simple_repeat	1	73	(0)	3181912
17	16.2	0.0	4.4	chr5	95961875	95961919	(85576340)	+	(CCGCCC)n	Simple_repeat	1	45	(0)	3181913
1247	30.4	7.4	3.2	chr5	96189435	96190186	(85348073)	C	HAL1ME	LINE/L1	(1001)	1464	679	3182241
2449	18.3	12.9	1.3	chr5	96402184	96402793	(85135466)	+	MER76	LTR/ERVL	1	691	(0)	3182512
2614	5.7	0.0	0.0	chr5	102606950	102607247	(78931012)	+	AluYm1	SINE/Alu	4	301	(10)	3190341
761	24.0	0.6	1.2	chr5	102607314	102607486	(78930773)	C	MIR	SINE/MIR	(42)	220	49	3190342
5100	14.0	2.9	0.2	chr5	104921194	104922028	(76616231)	C	Tigger1	DNA/TcMar-Tigger	(402)	2016	1159	3193242
2031	18.1	7.5	0.0	chr5	104922029	104922420	(76615839)	+	MSTB	LTR/ERVL-MaLR	1	424	(2)	3193243
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
470	31.7	1.2	1.2	chr5	111695177	111695345	(69842914)	+	MIRb	SINE/MIR	100	268	(0)	3201774
15	17.5	0.0	0.0	chr5	111695347	111695379	(69842880)	+	(TTATTG)n	Simple_repeat	1	33	(0)	3201775
1975	25.3	6.8	3.9	chr5	112500103	112500748	(69037511)	C	L1ME2	LINE/L1	(7)	6157	5492	3202856
323	28.0	2.0	4.7	chr5	113583179	113583328	(67954931)	+	L1MC5a	LINE/L1	2493	2638	(139)	3204500
667	23.0	5.8	8.9	chr5	113583372	113583475	(67954784)	C	L1MC5a	LINE/L1	(478)	2299	2206	3204501
12460	16.1	5.0	3.1	chr5	113882701	113885030	(67653229)	C	L1MB3	LINE/L1	(3822)	2560	181	3204868
12	20.0	5.0	0.0	chr5	115262801	115262840	(66275419)	+	(CCGCTCA)n	Simple_repeat	1	42	(0)	3206534
9813	15.8	1.3	0.7	chr5	115564717	115566356	(65971903)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	3206975
236	16.3	3.9	0.0	chr5	115566357	115566405	(65971854)	+	MSTB	LTR/ERVL-MaLR	1	51	(377)	3206975
1380	18.8	15.8	1.3	chr5	115566429	115566746	(65971513)	+	MSTB	LTR/ERVL-MaLR	39	411	(17)	3206975
788	27.6	5.2	2.9	chr5	117522615	117522877	(64015382)	+	MLT1E1A	LTR/ERVL-MaLR	27	380	(300)	3209715
2652	6.4	0.6	0.0	chr5	117522878	117523219	(64015040)	+	LTR14A	LTR/ERVK	1	344	(0)	3209716
788	29.8	2.6	3.6	chr5	117523220	117523439	(64014820)	+	MLT1E1A	LTR/ERVL-MaLR	381	596	(84)	3209715
775	24.3	21.2	3.3	chr5	124583479	124583858	(56954401)	C	LTR16A1	LTR/ERVL	(0)	495	41	3218830
6099	14.3	5.1	2.9	chr5	125053889	125054253	(56484006)	C	Tigger3b	DNA/TcMar-Tigger	(10)	1221	845	3219562
3152	14.3	4.9	2.1	chr5	125054254	125054767	(56483492)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	3219563
2008	15.1	7.7	0.3	chr5	127207136	127207508	(54330751)	+	MSTA	LTR/ERVL-MaLR	26	428	(0)	3222535
5398	18.2	3.9	2.5	chr5	130642484	130643196	(50895063)	C	L1MA2	LINE/L1	(6530)	1035	304	3226777
2876	13.2	5.7	0.6	chr5	130643197	130643682	(50894577)	C	MER9a3	LTR/ERVK	(0)	512	1	3226783
13	14.5	7.7	1.2	chr5	132076235	132076274	(49461985)	+	G-rich	Low_complexity	1	42	(0)	3228890
757	26.7	6.5	1.0	chr5	133233940	133234143	(48304116)	C	MER58A	DNA/hAT-Charlie	(0)	224	9	3230731
1993	14.2	6.8	3.1	chr5	133279151	133279476	(48258783)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	3230784
1036	25.8	11.4	4.7	chr5	133279724	133280146	(48258113)	+	MLT1C	LTR/ERVL-MaLR	6	460	(7)	3230785
554	25.8	9.8	4.2	chr5	133734597	133734904	(47803355)	C	L1M6	LINE/L1	(4913)	1583	1257	3231325
2213	11.1	0.0	0.3	chr5	133735183	133735479	(47802780)	+	AluSc5	SINE/Alu	1	296	(13)	3231328
977	30.4	8.7	3.1	chr5	133920608	133921126	(47617133)	+	L1MC4	LINE/L1	6806	7356	(686)	3231582
207	36.3	5.2	4.5	chr5	134112131	134112398	(47425861)	+	L2b	LINE/L2	3080	3349	(26)	3231961
649	30.1	4.2	7.4	chr5	134140161	134140558	(47397701)	C	L2b	LINE/L2	(8)	3418	2980	3231991
276	27.6	5.6	3.6	chr5	134467347	134467395	(47070864)	+	MER103C	DNA/hAT-Charlie	65	115	(182)	3232625
1929	14.9	1.7	1.0	chr5	134467396	134467684	(47070575)	+	AluJb	SINE/Alu	21	311	(1)	3232626
2331	7.1	0.0	5.5	chr5	134737990	134738315	(46799944)	C	AluSg	SINE/Alu	(2)	308	1	3233228
455	26.8	13.3	4.0	chr5	134874873	134875108	(46663151)	C	MIRb	SINE/MIR	(7)	255	7	3233564
338	29.4	6.9	0.6	chr5	137220410	137220573	(44317686)	C	MIR	SINE/MIR	(7)	255	81	3236666
187	27.9	3.2	0.0	chr5	137220645	137220705	(44317554)	+	L2c	LINE/L2	3281	3343	(44)	3236667
313	31.6	10.0	2.7	chr5	137889006	137889194	(43649065)	+	MIRb	SINE/MIR	2	211	(57)	3237696
481	22.4	0.8	2.4	chr5	138036107	138036231	(43502028)	+	MER91B	DNA/hAT-Tip100	25	213	(3311)	3237967
1000	25.6	13.2	0.7	chr5	138036322	138036620	(43501639)	C	LTR78	LTR/ERV1	(768)	536	195	3237966
456	22.9	3.7	0.0	chr5	138696412	138696516	(42841743)	C	MIRb	SINE/MIR	(65)	203	95	3239382
483	34.6	4.1	9.5	chr5	139438640	139438977	(42099282)	+	L2b	LINE/L2	3054	3372	(3)	3240767
16	15.2	4.2	4.0	chr5	139439151	139439198	(42099061)	+	G-rich	Low_complexity	1	50	(0)	3240768
393	25.6	5.0	3.8	chr5	139700115	139700233	(41838026)	+	MLT1K	LTR/ERVL-MaLR	151	287	(308)	3241328
2138	10.2	0.3	0.3	chr5	139713797	139714118	(41824141)	C	AluSx	SINE/Alu	(0)	312	1	3241356
17	34.5	1.1	3.3	chr5	139752434	139752522	(41785737)	+	(AC)n	Simple_repeat	1	90	(0)	3241447
28	34.2	0.8	2.4	chr5	139752627	139752752	(41785507)	+	(CA)n	Simple_repeat	1	127	(0)	3241448
19	18.9	0.0	0.0	chr5	140108723	140108758	(41429501)	+	A-rich	Low_complexity	1	36	(0)	3242042
19	4.5	0.0	0.0	chr5	140546676	140546698	(40991561)	+	(A)n	Simple_repeat	1	23	(0)	3242805
2035	12.8	0.0	0.4	chr5	140546943	140547208	(40991051)	C	AluSz	SINE/Alu	(47)	265	1	3242806
191	32.2	5.1	10.8	chr5	142285634	142285800	(39252459)	C	L2a	LINE/L2	(43)	3344	3188	3245637
496	23.8	13.1	0.6	chr5	142285903	142286075	(39252184)	C	L1ME4b	LINE/L1	(0)	892	695	3245643
1014	32.4	14.2	2.0	chr5	143634235	143634838	(37903421)	+	L3	LINE/CR1	3309	3998	(101)	3248009
3846	8.1	8.4	4.0	chr5	145726914	145727493	(35810766)	C	LTR14B	LTR/ERVK	(0)	608	1	3251182
1550	8.3	0.0	0.5	chr5	145729527	145729745	(35808514)	C	HERVK14-int	LTR/ERVK	(5878)	218	1	3251186
3613	7.6	13.3	1.3	chr5	145729746	145730279	(35807980)	C	LTR14B	LTR/ERVK	(0)	608	1	3251186
483	28.5	4.5	5.3	chr5	145975732	145975965	(35562294)	+	MIR	SINE/MIR	21	247	(15)	3251632
10790	21.9	5.3	4.9	chr5	149397469	149398353	(32139906)	C	Ricksha	DNA/MULE-MuDR	(2186)	1060	1	3257638
649	27.2	3.9	5.9	chr5	149637040	149637247	(31901012)	C	MER102c	DNA/hAT-Charlie	(16)	315	103	3258187
2173	10.8	0.3	1.4	chr5	149637248	149637262	(31900997)	C	AluSx	SINE/Alu	(18)	294	281	3258188
38	0.0	0.0	0.0	chr5	149637263	149637297	(31900962)	+	(TTA)n	Simple_repeat	1	35	(0)	3258189
269	30.0	8.5	4.1	chr5	149656647	149656792	(31881467)	C	MamGypLTR3	LTR/Gypsy	(133)	761	609	3258240
24858	12.0	1.0	1.4	chr5	150991474	150991831	(30546428)	C	LTR46-int	LTR/ERV1	(3575)	3410	3057	3260937
2358	12.0	2.4	0.0	chr5	150991830	150992196	(30546063)	C	LTR46-int	LTR/ERV1	(4700)	2285	1910	3260937
2582	13.8	1.3	0.7	chr5	150992196	150992655	(30545604)	C	LTR46-int	LTR/ERV1	(5700)	1285	823	3260937
3475	13.9	0.9	0.4	chr5	150992754	150993310	(30544949)	C	LTR46-int	LTR/ERV1	(6425)	560	1	3260937
202	24.2	4.3	15.6	chr5	151182915	151183100	(30355159)	C	MIR3	SINE/MIR	(3)	205	42	3261334
3495	20.7	9.6	3.3	chr5	152951393	152953186	(28585073)	+	L1MB7	LINE/L1	4714	6681	(1)	3264451
244	31.9	7.1	1.4	chr5	154478557	154478722	(27059537)	C	MIR3	SINE/MIR	(8)	200	27	3267234
2327	6.7	3.4	0.0	chr5	154682189	154682471	(26855788)	C	AluSx	SINE/Alu	(19)	293	1	3267768
494	28.2	14.3	4.7	chr5	157144038	157144357	(24393902)	+	L2a	LINE/L2	2559	2914	(505)	3272137
643	30.8	6.2	9.5	chr5	157144363	157144446	(24393813)	+	L2a	LINE/L2	3016	3106	(320)	3272137
2355	6.0	0.0	0.4	chr5	157144447	157144759	(24393500)	C	AluY	SINE/Alu	(0)	311	2	3272147
1867	15.2	0.0	3.1	chr5	158347682	158347970	(23190289)	+	AluJb	SINE/Alu	1	280	(32)	3274436
229	33.5	7.2	1.9	chr5	158348035	158348192	(23190067)	+	MER5B	DNA/hAT-Charlie	1	167	(11)	3274437
293	33.0	14.2	3.6	chr5	159107138	159107438	(22430821)	+	L2c	LINE/L2	3002	3359	(28)	3275559
18	3.6	3.2	3.1	chr5	159208191	159208221	(22330038)	+	(AGC)n	Simple_repeat	1	32	(0)	3275706
3011	12.6	5.4	11.1	chr5	161498586	161499217	(20039042)	+	LTR14B	LTR/ERVK	15	608	(0)	3279819
2220	13.3	0.0	0.0	chr5	168397142	168397442	(13140817)	C	AluSx1	SINE/Alu	(11)	301	1	3289953
437	26.0	10.2	3.5	chr5	168397443	168397624	(13140635)	C	L1ME4a	LINE/L1	(196)	5928	5729	3289952
24	17.8	5.3	0.0	chr5	168418039	168418095	(13120164)	+	(TC)n	Simple_repeat	1	60	(0)	3290002
200	30.0	8.2	1.1	chr5	168418350	168418440	(13119819)	C	MER5B	DNA/hAT-Charlie	(62)	116	19	3290003
665	27.6	4.8	4.0	chr5	169008822	169009047	(12529212)	C	MIR	SINE/MIR	(0)	262	35	3291098
967	27.4	10.6	1.5	chr5	169629545	169629993	(11908266)	C	Charlie8	DNA/hAT-Charlie	(1951)	477	13	3292094
446	18.3	3.5	0.0	chr5	170744798	170744879	(10793380)	+	MER45A	DNA/hAT-Tip100	60	144	(34)	3294228
1902	13.0	1.4	0.3	chr5	170744929	170745212	(10793047)	C	AluJb	SINE/Alu	(25)	287	1	3294229
48	24.2	1.3	3.9	chr5	171495275	171495428	(10042831)	+	GA-rich	Low_complexity	1	156	(0)	3295423
214	31.1	9.7	0.0	chr5	171823605	171823707	(9714552)	+	MIRb	SINE/MIR	46	159	(109)	3296110
215	23.5	5.6	0.0	chr5	172437963	172438021	(9100238)	C	L2b	LINE/L2	(0)	3426	3324	3297433
679	33.0	4.7	1.1	chr5	172438111	172438459	(9099800)	+	L2c	LINE/L2	3020	3381	(6)	3297434
2354	9.4	0.0	3.1	chr5	172780629	172780948	(8757311)	+	AluY	SINE/Alu	1	310	(1)	3298177
498	25.6	5.3	6.1	chr5	172781009	172781129	(8757130)	+	L1MC5a	LINE/L1	19	135	(2642)	3298178
2401	9.8	0.3	0.0	chr5	172781130	172781434	(8756825)	C	AluSx1	SINE/Alu	(6)	306	1	3298179
2355	9.8	0.0	0.0	chr5	173048783	173049079	(8489180)	C	AluSx	SINE/Alu	(15)	297	1	3298825
3773	11.7	2.2	5.3	chr5	173049080	173049199	(8489060)	C	LTR26D	LTR/ERV1	(480)	124	2	3298823
1041	26.7	6.5	2.4	chr5	173639142	173639552	(7898707)	C	LTR16	LTR/ERVL	(0)	438	10	3299961
1671	17.7	1.7	0.7	chr5	173847473	173847760	(7690499)	+	AluJb	SINE/Alu	16	306	(6)	3300425
2341	15.4	5.4	1.9	chr5	173847761	173847922	(7690337)	C	MSTB	LTR/ERVL-MaLR	(256)	170	2	3300424
345	29.0	8.0	6.8	chr5	174693462	174693609	(6844650)	C	MIRb	SINE/MIR	(15)	253	104	3302027
22	0.0	0.0	0.0	chr5	174750902	174750925	(6787334)	+	(A)n	Simple_repeat	1	24	(0)	3302154
3441	13.0	6.0	0.8	chr5	175005882	175006494	(6531765)	+	L1MA8	LINE/L1	5644	6290	(1)	3302629
488	30.0	10.4	4.9	chr5	175037771	175038178	(6500081)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	20	3302692
14	11.6	4.9	4.7	chr5	175872624	175872664	(5665595)	+	(CTCCC)n	Simple_repeat	1	43	(0)	3304316
1735	16.4	10.1	0.6	chr5	176257332	176257679	(5280580)	C	MSTA	LTR/ERVL-MaLR	(27)	401	14	3304904
2380	12.0	0.0	0.0	chr5	176586187	176586495	(4951764)	C	AluSz	SINE/Alu	(3)	309	1	3305608
271	24.2	4.7	0.0	chr5	176586496	176586581	(4951678)	+	MIR3	SINE/MIR	39	133	(75)	3305607
591	29.3	11.2	0.0	chr5	176641926	176642140	(4896119)	C	MIR	SINE/MIR	(6)	256	15	3305727
266	30.0	3.2	0.0	chr5	176642257	176642346	(4895913)	C	Charlie8	DNA/hAT-Charlie	(2275)	153	61	3305728
674	13.4	7.3	4.2	chr5	176642359	176642477	(4895782)	+	AluJo	SINE/Alu	3	125	(187)	3305729
12	13.9	0.0	0.0	chr5	177456202	177456225	(4082034)	+	(GGGA)n	Simple_repeat	1	24	(0)	3307454
309	27.8	7.3	0.0	chr5	177497934	177498058	(4040201)	+	MIRb	SINE/MIR	114	259	(9)	3307531
227	28.1	0.0	0.0	chr5	177654493	177654556	(3883703)	+	L1M5	LINE/L1	4628	4691	(1455)	3307796
1733	15.8	11.4	0.7	chr5	177654594	177654941	(3883318)	+	MSTA	LTR/ERVL-MaLR	14	401	(27)	3307798
2415	7.7	0.3	0.0	chr5	178154155	178154451	(3383808)	C	AluSp	SINE/Alu	(15)	298	1	3308662
494	13.5	0.0	1.4	chr5	178247976	178248049	(3290210)	+	AluYh7	SINE/Alu	212	284	(27)	3308863
1849	18.8	7.1	0.5	chr5	178448437	178448805	(3089454)	C	MSTD	LTR/ERVL-MaLR	(1)	395	1	3309191
566	14.9	1.9	1.0	chr5	178448833	178448934	(3089325)	+	MLT1A1	LTR/ERVL-MaLR	264	366	(42)	3309190
2328	8.6	3.2	0.7	chr5	178489952	178490255	(3048004)	+	AluSq	SINE/Alu	1	312	(1)	3309266
2500	19.5	1.3	5.0	chr5	178490256	178490584	(3047675)	+	L1MB3	LINE/L1	5819	6136	(47)	3309265
1122	16.5	5.0	2.1	chr5	178490587	178490780	(3047479)	+	AluJr	SINE/Alu	87	286	(26)	3309267
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
869	23.2	9.8	1.4	chr5	178598004	178598173	(2940086)	C	L1MC5a	LINE/L1	(603)	2174	1989	3309458
1880	13.6	9.9	1.7	chr5	178598174	178598517	(2939742)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3309459
15	13.9	0.0	0.0	chr5	178627215	178627238	(2911021)	+	(C)n	Simple_repeat	1	24	(0)	3309511
2149	17.1	7.5	3.0	chr5	178741575	178742009	(2796250)	C	MSTB2	LTR/ERVL-MaLR	(1)	456	1	3309732
2825	12.1	8.2	14.9	chr5	178742158	178742799	(2795460)	C	LTR14B	LTR/ERVK	(0)	608	14	3309733
3361	11.6	0.5	20.2	chr5	178908836	178909593	(2628666)	+	LTR14B	LTR/ERVK	1	608	(0)	3310045
12	16.3	0.0	7.5	chr5	178909756	178909795	(2628464)	+	(CCTTC)n	Simple_repeat	1	40	(0)	3310046
12	13.2	5.7	2.7	chr5	179807154	179807188	(1731071)	+	(GCG)n	Simple_repeat	1	37	(0)	3311615
2487	7.4	0.0	0.0	chr5	179807641	179807950	(1730309)	C	AluSx4	SINE/Alu	(0)	310	1	3311616
306	21.5	3.7	0.0	chr5	180113913	180113991	(1424268)	C	L2b	LINE/L2	(178)	3197	3116	3312102
1201	19.9	5.2	0.4	chr5	180587983	180588255	(950004)	+	LTR47A	LTR/ERVL	163	452	(0)	3312955
333	30.3	4.0	1.4	chr5	180830360	180830506	(707753)	+	MLT1D	LTR/ERVL-MaLR	248	398	(114)	3313309
271	21.2	6.3	8.5	chr5	181045691	181045819	(492440)	C	MamRep38	DNA/hAT	(36)	259	134	3313561
2130	4.3	0.7	2.5	chr5	181262211	181262489	(275770)	C	AluY	SINE/Alu	(7)	304	31	3313945
2203	11.7	0.7	0.3	chr6	3588233	3588532	(167217447)	+	AluSz	SINE/Alu	1	301	(11)	3319134
750	14.2	0.0	10.8	chr6	3588862	3589009	(167216970)	+	FLAM_A	SINE/Alu	1	132	(10)	3319135
749	28.6	1.3	1.3	chr6	3589015	3589251	(167216728)	C	MER103C	DNA/hAT-Charlie	(54)	243	7	3319136
1017	26.5	15.3	2.9	chr6	3747107	3747909	(167058070)	+	L2a	LINE/L2	2451	3423	(3)	3319350
1411	23.3	8.8	2.6	chr6	4182177	4182912	(166623067)	C	L1ME4a	LINE/L1	(461)	5712	4925	3320080
18	12.2	0.0	0.0	chr6	5714071	5714097	(165091882)	+	(TG)n	Simple_repeat	1	27	(0)	3322438
230	30.2	2.5	0.0	chr6	7942374	7942489	(162863490)	C	L1ME3G	LINE/L1	(9)	915	797	3325928
335	37.3	5.5	2.6	chr6	7942545	7942775	(162863204)	C	MIRc	SINE/MIR	(9)	259	22	3325929
449	22.2	9.0	3.4	chr6	10146821	10146997	(160658982)	C	L1M6	LINE/L1	(5467)	1029	842	3329013
17	16.4	1.9	5.6	chr6	10147020	10147072	(160658907)	+	(CCCTCCA)n	Simple_repeat	1	54	(0)	3329014
262	25.0	12.3	2.0	chr6	10147127	10147201	(160658778)	C	L1M6	LINE/L1	(5962)	534	457	3329013
26	0.0	0.0	0.0	chr6	10147202	10147226	(160658753)	+	(GTTTT)n	Simple_repeat	1	25	(0)	3329015
262	25.0	12.3	2.0	chr6	10147227	10147252	(160658727)	C	L1M6	LINE/L1	(6040)	456	421	3329013
413	27.5	0.6	5.3	chr6	10147268	10147436	(160658543)	+	L1M6	LINE/L1	1597	1757	(4739)	3329009
17	15.3	0.0	0.0	chr6	10413860	10413888	(160392091)	+	A-rich	Low_complexity	1	29	(0)	3329452
247	25.0	5.2	5.2	chr6	10887637	10887771	(159918208)	C	MER5B	DNA/hAT-Charlie	(30)	148	14	3330390
12	17.7	3.1	0.0	chr6	11224604	11224635	(159581344)	+	A-rich	Low_complexity	1	33	(0)	3330915
2522	22.4	3.9	4.1	chr6	14098314	14098857	(156707122)	C	L1MC4a	LINE/L1	(1937)	5945	5410	3335466
341	27.2	10.9	0.0	chr6	14742696	14742809	(156063170)	+	MLT1L	LTR/ERVL-MaLR	141	268	(342)	3336480
3963	18.1	1.3	8.8	chr6	14938609	14939414	(155866565)	C	L1MC3	LINE/L1	(251)	7534	6761	3336810
510	25.5	3.6	9.2	chr6	14939415	14939621	(155866358)	C	Tigger12A	DNA/TcMar-Tigger	(527)	292	98	3336813
1052	23.4	5.7	8.4	chr6	15553766	15554253	(155251726)	+	MER39	LTR/ERV1	1	628	(79)	3338064
18	20.1	0.0	9.3	chr6	15662681	15662755	(155143224)	+	(GGCGG)n	Simple_repeat	1	75	(0)	3338218
15	30.9	1.4	1.4	chr6	15662984	15663052	(155142927)	+	(CCGGCC)n	Simple_repeat	1	70	(0)	3338219
2590	16.4	8.4	1.7	chr6	15842306	15842784	(154963195)	C	MLT2B4	LTR/ERVL	(42)	514	1	3338537
781	19.1	0.7	0.0	chr6	16017836	16017971	(154788008)	+	MER5A1	DNA/hAT-Charlie	7	143	(23)	3338846
2292	12.0	0.0	2.0	chr6	16017999	16018299	(154787680)	+	AluSx3	SINE/Alu	1	295	(16)	3338847
474	34.7	3.5	2.0	chr6	16311106	16311358	(154494621)	C	MIRb	SINE/MIR	(8)	260	4	3339314
199	24.0	15.0	4.0	chr6	16311458	16311557	(154494422)	C	OldhAT1	DNA/hAT-Ac	(2106)	742	630	3339315
3389	19.7	1.0	0.8	chr6	17358236	17358849	(153447130)	+	MSTB1-int	LTR/ERVL-MaLR	1037	1651	(0)	3341004
2483	11.9	6.7	0.7	chr6	17358850	17359255	(153446724)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3341004
13584	14.0	3.5	3.3	chr6	17682943	17683857	(153122122)	C	Tigger1	DNA/TcMar-Tigger	(588)	1830	955	3341581
1959	16.7	8.8	1.3	chr6	17683858	17684245	(153121734)	+	MSTB	LTR/ERVL-MaLR	5	424	(2)	3341583
414	26.8	14.0	3.2	chr6	19730909	19731066	(151074913)	+	MIRb	SINE/MIR	36	213	(55)	3344837
246	33.6	2.5	5.7	chr6	19731113	19731235	(151074744)	C	L3	LINE/CR1	(456)	3643	3525	3344838
4212	15.1	2.4	1.4	chr6	19731280	19731997	(151073982)	+	MER44C	DNA/TcMar-Tigger	9	733	(0)	3344839
426	29.0	13.5	1.6	chr6	20291001	20291189	(150514790)	C	MIRb	SINE/MIR	(40)	228	14	3345757
22	9.9	4.4	2.1	chr6	20402350	20402394	(150403585)	+	(GCC)n	Simple_repeat	1	47	(0)	3345986
16	21.3	0.0	2.2	chr6	20403564	20403608	(150402371)	+	G-rich	Low_complexity	1	45	(0)	3345988
26	26.9	1.2	1.1	chr6	20403657	20403742	(150402237)	+	(CGCCCC)n	Simple_repeat	1	87	(0)	3345989
12	8.8	10.5	2.4	chr6	20403887	20403924	(150402055)	+	(GTTGAGCG)n	Simple_repeat	1	42	(0)	3345990
255	18.6	9.2	0.0	chr6	20811286	20811344	(149994635)	+	LTR65	LTR/ERV1	321	385	(284)	3346658
1813	25.4	6.7	5.5	chr6	20811418	20811824	(149994155)	C	L1MC5a	LINE/L1	(415)	2362	1944	3346659
3043	19.5	12.2	3.7	chr6	21703222	21704099	(149101880)	+	L1MC5	LINE/L1	8342	9295	(9)	3348138
191	30.4	0.0	0.0	chr6	21801676	21801721	(149004258)	C	MER5B	DNA/hAT-Charlie	(132)	46	1	3348333
1585	15.8	5.3	2.2	chr6	21925717	21925989	(148879990)	+	AluJb	SINE/Alu	7	288	(24)	3348549
1706	18.4	12.0	0.3	chr6	22181231	22181606	(148624373)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3348931
2020	13.7	0.0	2.0	chr6	22181614	22181925	(148624054)	C	AluSx	SINE/Alu	(0)	312	1	3348932
3629	7.4	10.6	0.4	chr6	23898736	23899278	(146906701)	+	LTR14B	LTR/ERVK	4	608	(0)	3351126
3621	21.9	11.3	4.0	chr6	23899279	23899585	(146906394)	C	L1MC3	LINE/L1	(2460)	3861	3540	3351122
2520	15.8	1.4	1.6	chr6	25197853	25198276	(145607703)	+	MSTB	LTR/ERVL-MaLR	1	423	(3)	3353231
2398	12.8	4.2	2.4	chr6	26335642	26336065	(144469914)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	3355048
181	32.0	4.0	6.7	chr6	26336066	26336169	(144469810)	C	MIR	SINE/MIR	(8)	254	154	3355049
3867	11.0	0.4	2.1	chr6	27195722	27196279	(143609700)	+	LTR14	LTR/ERVK	1	548	(0)	3356439
8661	24.1	6.0	3.3	chr6	27208956	27209753	(143596226)	+	ERVL-E-int	LTR/ERVL	2894	3647	(2020)	3356472
747	1.2	0.0	0.0	chr6	27209849	27209931	(143596048)	+	tRNA-Ser-TCG	tRNA	1	83	(2)	3356475
3146	11.3	6.6	9.3	chr6	27352348	27352969	(143453010)	+	LTR14B	LTR/ERVK	5	608	(0)	3356757
14358	15.4	3.7	1.2	chr6	27352970	27354979	(143451000)	+	L1MA4	LINE/L1	4779	6824	(178)	3356755
1345	22.6	1.4	2.7	chr6	27556293	27556592	(143249387)	C	MER90a	LTR/ERV1	(0)	614	319	3357108
2236	10.1	0.0	1.3	chr6	27556828	27557135	(143248844)	C	AluSz	SINE/Alu	(8)	304	1	3357109
305	30.5	14.8	2.1	chr6	27742912	27743152	(143062827)	+	L1ME5	LINE/L1	5621	5897	(297)	3357504
11	28.5	4.2	2.7	chr6	27743155	27743225	(143062754)	+	A-rich	Low_complexity	1	74	(0)	3357505
465	20.7	9.9	11.0	chr6	28252985	28253147	(142552832)	+	MIR	SINE/MIR	78	238	(24)	3358333
12	19.9	2.3	4.4	chr6	28267225	28267268	(142538711)	+	G-rich	Low_complexity	1	45	(0)	3358358
1377	25.4	7.9	4.8	chr6	28267429	28268047	(142537932)	C	L2a	LINE/L2	(245)	3181	2544	3358359
628	4.0	0.0	0.0	chr6	28607156	28607230	(142198749)	+	tRNA-Ala-GCY_	tRNA	1	75	(0)	3358903
645	15.1	11.3	0.8	chr6	30577577	30577695	(140228284)	+	FLAM_C	SINE/Alu	1	133	(10)	3361834
21	14.5	0.0	0.0	chr6	30577876	30577913	(140228066)	+	(AGC)n	Simple_repeat	1	38	(0)	3361835
12	25.2	2.4	0.0	chr6	30602733	30602774	(140203205)	+	(AACTCCC)n	Simple_repeat	1	43	(0)	3361886
3315	32.5	4.6	4.7	chr6	30990000	30991151	(139814828)	+	ERVL47-int	LTR/ERVL	10	1190	(4056)	3362607
1535	19.4	1.1	1.8	chr6	31245821	31246098	(139559881)	C	AluJb	SINE/Alu	(30)	282	7	3363090
3832	21.6	1.6	3.4	chr6	31246099	31246550	(139559429)	C	ERVL-B4-int	LTR/ERVL	(421)	5293	4846	3363088
288	26.0	7.1	0.0	chr6	31418416	31418519	(139387460)	C	MER5A1	DNA/hAT-Charlie	(29)	137	26	3363299
16	0.0	0.0	0.0	chr6	31418520	31418537	(139387442)	+	(GT)n	Simple_repeat	1	18	(0)	3363300
713	20.9	0.0	1.6	chr6	31418551	31418679	(139387300)	C	AluJb	SINE/Alu	(30)	282	156	3363301
13	23.6	0.0	0.0	chr6	32154637	32154671	(138651308)	+	(CTG)n	Simple_repeat	1	35	(0)	3364477
16118	6.4	0.3	1.6	chr6	33355102	33355241	(137450738)	C	Harlequin-int	LTR/ERV1	(4726)	2170	2035	3366266
1693	12.1	16.1	0.0	chr6	33355251	33355586	(137450393)	+	LTR14B	LTR/ERVK	216	606	(2)	3366271
1130	13.1	0.0	2.2	chr6	33355588	33355766	(137450213)	C	HERVIP10FH-int	LTR/ERV1	(4927)	175	1	3366272
3349	9.1	7.8	0.4	chr6	33355767	33356239	(137449740)	C	LTR10F	LTR/ERV1	(0)	511	1	3366272
1143	15.9	11.9	0.0	chr6	34610496	34610703	(136195276)	+	Tigger4a	DNA/TcMar-Tigger	1	236	(0)	3368748
187	26.5	8.1	0.0	chr6	35216280	35216347	(135589632)	C	L2b	LINE/L2	(45)	3330	3257	3369929
660	20.4	0.0	0.0	chr6	36301134	36301236	(134504743)	C	AluJb	SINE/Alu	(25)	287	185	3372199
307	31.4	12.5	4.1	chr6	36301253	36301727	(134504252)	+	L2b	LINE/L2	2788	3302	(73)	3372200
389	13.4	2.9	0.0	chr6	36360492	36360558	(134445421)	+	L3	LINE/CR1	3941	4009	(90)	3372327
13	28.9	0.0	0.0	chr6	37433291	37433332	(133372647)	+	(GGC)n	Simple_repeat	1	42	(0)	3374686
13	27.1	0.0	3.9	chr6	37433376	37433427	(133372552)	+	(GCGG)n	Simple_repeat	1	52	(0)	3374687
13	22.8	0.0	6.2	chr6	37654644	37654691	(133151288)	+	G-rich	Low_complexity	1	48	(0)	3375073
431	25.7	5.0	3.2	chr6	38162506	38162662	(132643317)	+	MER5B	DNA/hAT-Charlie	3	162	(16)	3375988
2523	13.1	5.7	13.5	chr6	38709772	38710388	(132095591)	+	LTR14B	LTR/ERVK	17	562	(25)	3376840
1088	24.7	3.8	6.1	chr6	38710596	38710923	(132095056)	+	MER11D	LTR/ERVK	103	422	(475)	3376841
181	11.1	0.0	0.0	chr6	39066725	39066751	(131739228)	C	L3b	LINE/CR1	(201)	5031	5005	3377413
229	23.8	5.0	7.2	chr6	39066896	39066989	(131738990)	+	L2c	LINE/L2	3300	3383	(4)	3377411
476	28.8	6.4	2.1	chr6	39067027	39067264	(131738715)	C	L1ME3C	LINE/L1	(63)	6179	5931	3377414
307	26.2	3.6	0.9	chr6	40932806	40932913	(129873066)	+	MIR3	SINE/MIR	50	160	(48)	3380326
11	21.6	7.3	1.7	chr6	41734213	41734267	(129071712)	+	(GGCCAGC)n	Simple_repeat	1	59	(0)	3381713
2486	7.5	0.0	0.7	chr6	42709050	42709355	(128096624)	+	AluSx3	SINE/Alu	2	305	(6)	3383833
533	30.6	5.3	1.8	chr6	42709440	42709602	(128096377)	C	L2a	LINE/L2	(0)	3426	3258	3383834
1807	12.7	3.3	3.3	chr6	42891299	42891605	(127914374)	C	AluSz	SINE/Alu	(5)	307	1	3384285
2641	10.5	5.1	1.6	chr6	43290049	43290483	(127515496)	C	Tigger2	DNA/TcMar-Tigger	(1)	2717	2267	3385073
407	16.4	0.0	0.0	chr6	43290468	43290534	(127515445)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(999)	69	3	3385074
515	20.4	1.6	0.7	chr6	43290699	43290835	(127515144)	+	FLAM_C	SINE/Alu	21	217	(85)	3385075
12	20.2	2.9	0.0	chr6	43456003	43456036	(127349943)	+	(CTC)n	Simple_repeat	1	35	(0)	3385386
13	16.3	2.8	2.7	chr6	43456099	43456134	(127349845)	+	(CCACC)n	Simple_repeat	1	37	(0)	3385387
302	35.1	4.4	1.9	chr6	43848650	43848803	(126957176)	C	MIRb	SINE/MIR	(52)	216	59	3386123
255	28.7	0.0	7.3	chr6	43850842	43850950	(126955029)	+	MIRc	SINE/MIR	116	216	(52)	3386130
296	35.4	7.9	3.5	chr6	44257918	44258265	(126547714)	+	L2a	LINE/L2	2984	3348	(78)	3386859
41	4.4	0.0	0.0	chr6	44712527	44712573	(126093406)	+	(AGCAGGGAGG)n	Simple_repeat	1	47	(0)	3387667
4447	15.9	3.2	4.7	chr6	45680947	45681516	(125124463)	+	L1MB3	LINE/L1	5641	6181	(2)	3388989
695	25.4	13.0	3.0	chr6	45710484	45710718	(125095261)	+	MamRep564	Unknown	95	356	(1)	3389041
14	13.8	2.9	2.8	chr6	52664740	52664774	(118141205)	+	(TCCC)n	Simple_repeat	1	36	(0)	3398909
338	34.0	1.6	1.6	chr6	53617242	53617366	(117188613)	+	L2c	LINE/L2	3199	3347	(40)	3400457
28	0.0	0.0	0.0	chr6	53617807	53617833	(117188146)	+	(TTTG)n	Simple_repeat	1	27	(0)	3400458
2235	14.2	5.5	1.7	chr6	63378464	63378878	(107427101)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	3410389
190	38.7	2.1	1.1	chr6	63378883	63378976	(107427003)	C	L2	LINE/L2	(512)	2907	2813	3410390
820	32.8	6.6	2.2	chr6	71160910	71161315	(99644664)	C	MamGypLTR1d	LTR/Gypsy	(0)	813	389	3420191
2201	16.1	0.8	2.4	chr6	77358415	77358797	(93447182)	+	THE1D	LTR/ERVL-MaLR	5	381	(0)	3428714
2055	11.0	9.3	4.4	chr6	78854118	78854531	(91951448)	+	LTR14B	LTR/ERVK	1	608	(0)	3430477
21995	6.9	0.9	0.9	chr6	78854532	78857411	(91948568)	+	HERVK14-int	LTR/ERVK	1	2882	(3214)	3430477
2125	9.6	9.4	4.4	chr6	78858334	78858747	(91947232)	+	LTR14B	LTR/ERVK	1	608	(0)	3430479
900	10.5	6.5	4.0	chr6	78858750	78858787	(91947192)	C	AluSx	SINE/Alu	(159)	153	121	3430476
8797	1.0	0.0	0.0	chr6	78858788	78859755	(91946224)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3430480
582	25.7	2.2	0.0	chr6	83065327	83065462	(87740517)	C	MER5A1	DNA/hAT-Charlie	(0)	166	28	3436011
3980	11.0	1.0	4.6	chr6	86146710	86147338	(84658641)	+	LTR14B	LTR/ERVK	3	608	(0)	3439954
358	28.2	20.3	1.1	chr6	86147438	86147616	(84658363)	+	MLT1J1	LTR/ERVL-MaLR	15	236	(212)	3439955
43	0.0	0.0	0.0	chr6	87912265	87912303	(82893676)	+	(AAAT)n	Simple_repeat	1	39	(0)	3442433
13	27.2	2.2	6.5	chr6	87923143	87923232	(82882747)	+	(CCCTGCC)n	Simple_repeat	1	92	(0)	3442445
236	11.8	0.0	0.0	chr6	88881186	88881219	(81924760)	+	Charlie2b	DNA/hAT-Charlie	1846	1879	(903)	3443718
883	27.6	5.7	2.8	chr6	88881214	88881571	(81924408)	C	Charlie2a	DNA/hAT-Charlie	(1021)	1840	1472	3443719
20	11.6	0.0	0.0	chr6	90218492	90218526	(80587453)	+	(T)n	Simple_repeat	1	35	(0)	3446049
18026	7.8	0.6	0.3	chr6	91591715	91594967	(79211012)	+	L1PA6	LINE/L1	2887	6153	(1)	3447888
16763	17.9	2.5	3.4	chr6	92301111	92303642	(78502337)	+	L1MA1	LINE/L1	16	2553	(5012)	3448757
2249	9.8	0.0	0.0	chr6	94914017	94914292	(75891687)	C	AluSx1	SINE/Alu	(36)	276	1	3451879
1037	31.6	11.6	1.7	chr6	94914293	94914840	(75891139)	+	L2a	LINE/L2	2797	3426	(0)	3451877
1726	18.3	3.5	13.6	chr6	95520642	95520909	(75285070)	+	MER65C	LTR/ERV1	203	461	(0)	3452571
34	0.0	0.0	0.0	chr6	95521076	95521106	(75284873)	+	(TGT)n	Simple_repeat	1	31	(0)	3452573
226	20.7	8.4	2.2	chr6	96679834	96679922	(74126057)	C	HAL1	LINE/L1	(2330)	177	83	3454000
181	8.0	0.0	0.0	chr6	96680259	96680283	(74125696)	+	L2	LINE/L2	2820	2844	(575)	3454001
253	22.5	1.9	9.7	chr6	98922782	98922894	(71883085)	+	Charlie18a	DNA/hAT-Charlie	191	294	(48)	3456876
390	28.6	15.0	6.1	chr6	98923009	98923364	(71882615)	+	LTR16A1	LTR/ERVL	78	493	(2)	3456877
347	35.2	11.3	0.5	chr6	99344009	99344205	(71461774)	+	MIRb	SINE/MIR	20	240	(28)	3457457
732	6.2	45.9	3.6	chr6	99394273	99394485	(71411494)	C	AluSx	SINE/Alu	(9)	303	1	3457559
938	6.2	7.2	2.3	chr6	104306997	104307128	(66498851)	+	MER85	DNA/PiggyBac	1	139	(0)	3463785
6885	17.9	5.5	2.2	chr6	104404711	104406223	(66399756)	+	L1MA9	LINE/L1	4745	6302	(10)	3463919
215	11.9	2.9	2.8	chr6	104424026	104424441	(66381538)	+	GA-rich	Low_complexity	1	428	(0)	3463944
542	23.8	5.2	2.6	chr6	104424757	104424907	(66381072)	C	MLT1J	LTR/ERVL-MaLR	(8)	554	400	3463945
228	30.0	1.1	3.2	chr6	104424827	104424919	(66381060)	C	LTR67B	LTR/ERVL	(76)	544	454	3463946
1444	30.9	5.1	1.4	chr6	105051742	105052281	(65753698)	C	L2a	LINE/L2	(0)	3426	2860	3464863
1572	21.8	7.6	0.9	chr6	105052282	105052614	(65753365)	C	MSTD	LTR/ERVL-MaLR	(0)	396	40	3464864
3332	24.6	7.6	2.3	chr6	105052622	105053382	(65752597)	C	L1MEf	LINE/L1	(2727)	3592	2757	3464865
4393	13.2	0.4	5.8	chr6	106858397	106859126	(63946853)	+	LTR8	LTR/ERV1	1	691	(0)	3467643
1843	21.0	5.9	0.8	chr6	106859149	106859547	(63946432)	+	MLT1C	LTR/ERVL-MaLR	38	458	(9)	3467644
2260	13.1	0.0	1.0	chr6	107437240	107437551	(63368428)	+	AluSz6	SINE/Alu	1	309	(3)	3468854
1005	20.4	5.4	5.8	chr6	107437556	107437795	(63368184)	C	MER8	DNA/TcMar-Tigger	(0)	239	1	3468855
364	35.3	0.5	2.4	chr6	107437877	107438088	(63367891)	+	ERVL-E-int	LTR/ERVL	1278	1485	(4182)	3468856
2722	5.3	1.2	0.0	chr6	107990629	107990968	(62815011)	+	LTR14A	LTR/ERVK	1	344	(0)	3469739
4068	5.5	2.7	0.8	chr6	107991070	107991580	(62814399)	+	HERV1_LTRa	LTR/ERV1	1	521	(0)	3469740
1646	24.4	5.9	1.8	chr6	108571385	108571822	(62234157)	+	MLT1C	LTR/ERVL-MaLR	7	463	(4)	3470850
320	29.9	17.5	6.0	chr6	109495548	109496084	(61309895)	+	L2c	LINE/L2	1283	1894	(1525)	3472265
557	26.8	22.8	3.2	chr6	110191457	110191796	(60614183)	C	L2a	LINE/L2	(91)	3335	2910	3473275
15	22.1	0.0	2.3	chr6	110476631	110476674	(60329305)	+	(CGCCC)n	Simple_repeat	1	44	(0)	3473710
2899	12.3	4.0	0.2	chr6	110617020	110617500	(60188479)	+	MER39B	LTR/ERV1	1	500	(153)	3473962
3579	14.1	0.6	0.0	chr6	110699888	110700412	(60105567)	+	MER1A	DNA/hAT-Charlie	1	528	(1)	3474120
13	10.0	0.0	0.0	chr6	110875023	110875044	(59930935)	+	(GCG)n	Simple_repeat	1	22	(0)	3474524
15	27.4	0.0	0.0	chr6	111259600	111259647	(59546332)	+	(AGGCGG)n	Simple_repeat	1	48	(0)	3475317
456	22.7	4.3	2.1	chr6	111259722	111259858	(59546121)	+	MIRc	SINE/MIR	15	156	(74)	3475318
1983	22.5	8.1	0.9	chr6	111689390	111689937	(59116042)	+	L1ME3	LINE/L1	5572	6162	(0)	3476060
508	28.6	11.1	4.4	chr6	111912496	111912904	(58893075)	C	L1ME4a	LINE/L1	(209)	5915	5476	3476356
3873	14.2	2.5	5.1	chr6	111912938	111913746	(58892233)	C	L1MB3	LINE/L1	(7)	6176	5389	3476357
2906	24.4	8.8	2.7	chr6	112024156	112025051	(58780928)	+	L2a	LINE/L2	2426	3426	(0)	3476534
37	21.7	0.0	0.0	chr6	112254337	112254409	(58551570)	+	(CT)n	Simple_repeat	1	73	(0)	3476842
9190	5.9	13.1	4.9	chr6	112688514	112689954	(58116025)	C	LTR12C	LTR/ERV1	(0)	1579	3	3477444
1249	26.0	9.1	1.0	chr6	112701116	112701507	(58104472)	C	LTR16A	LTR/ERVL	(1)	450	24	3477463
210	36.8	1.3	0.0	chr6	112701511	112701586	(58104393)	C	L2a	LINE/L2	(536)	2883	2807	3477462
642	31.1	10.9	3.0	chr6	113964639	113964999	(56840980)	+	L2	LINE/L2	2290	2682	(737)	3479413
2188	15.2	7.3	3.9	chr6	114430604	114431042	(56374937)	+	MSTB2	LTR/ERVL-MaLR	3	457	(0)	3480117
5056	15.0	2.5	1.3	chr6	115622888	115624040	(55181939)	+	L1PB4	LINE/L1	4992	6154	(2)	3481515
1887	26.8	5.4	3.0	chr6	115624061	115625008	(55180971)	C	L1ME3B	LINE/L1	(3267)	3970	2988	3481514
1629	20.7	4.1	1.4	chr6	116677860	116678142	(54127837)	C	MLT1A0	LTR/ERVL-MaLR	(68)	297	1	3482926
2536	8.1	0.0	0.0	chr6	117233693	117234001	(53571978)	C	AluSx3	SINE/Alu	(2)	309	1	3483637
21	4.0	0.0	0.0	chr6	117265268	117265293	(53540686)	+	(TC)n	Simple_repeat	1	26	(0)	3483668
16	20.0	4.3	0.0	chr6	117265452	117265497	(53540482)	+	(CCCCCG)n	Simple_repeat	1	48	(0)	3483669
696	28.3	1.8	1.4	chr6	117944940	117945170	(52860809)	C	L2a	LINE/L2	(3)	3423	3146	3484520
44990	10.6	0.9	0.5	chr6	118617801	118624278	(52181701)	+	HERV30-int	LTR/ERV1	3	6502	(1755)	3485403
2186	14.2	10.2	0.0	chr6	118792191	118792571	(52013408)	C	MSTB	LTR/ERVL-MaLR	(2)	424	1	3485698
435	31.8	6.3	0.4	chr6	118792622	118792832	(52013147)	+	MIR	SINE/MIR	2	226	(42)	3485699
2296	28.2	9.9	7.0	chr6	119073402	119074650	(51731329)	+	LTR78	LTR/ERV1	3	1292	(12)	3486082
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
406	24.2	14.7	2.6	chr6	119353383	119353573	(51452406)	C	Tigger16a	DNA/TcMar-Tigger	(6)	951	734	3486496
909	29.3	12.2	0.3	chr6	119646364	119646715	(51159264)	C	LTR33	LTR/ERVL	(115)	400	1	3486836
180	32.4	7.3	5.6	chr6	121118944	121119051	(49686928)	+	L2c	LINE/L2	3033	3142	(245)	3488579
14	10.3	5.9	2.8	chr6	121540343	121540376	(49265603)	+	(TTG)n	Simple_repeat	1	36	(0)	3489189
1610	16.4	3.0	4.9	chr6	121540404	121540707	(49265272)	+	AluJr	SINE/Alu	1	298	(14)	3489190
18	22.1	0.0	0.0	chr6	124961901	124961943	(45844036)	+	(GTGC)n	Simple_repeat	1	43	(0)	3493631
2473	20.1	6.5	9.9	chr6	125838613	125839108	(44966871)	C	MER21C	LTR/ERVL	(86)	852	354	3494901
2154	12.9	0.3	0.3	chr6	125839109	125839417	(44966562)	C	AluSz	SINE/Alu	(3)	309	1	3494902
2253	18.1	5.4	0.0	chr6	126872957	126873360	(43932619)	+	MSTB	LTR/ERVL-MaLR	1	414	(12)	3496129
735	15.1	0.0	0.0	chr6	127276037	127276142	(43529837)	+	AluJr4	SINE/Alu	162	267	(45)	3496663
17	18.2	0.0	0.0	chr6	127276150	127276180	(43529799)	+	(GT)n	Simple_repeat	1	31	(0)	3496664
16	5.2	0.0	0.0	chr6	127276172	127276191	(43529788)	+	(GA)n	Simple_repeat	1	20	(0)	3496665
18	21.6	0.0	0.0	chr6	127276181	127276190	(43529789)	+	(GAGT)n	Simple_repeat	4	44	(0)	3496666
192	34.1	4.8	0.7	chr6	127276250	127276388	(43529591)	C	L2c	LINE/L2	(697)	2722	2578	3496662
227	37.5	12.2	0.3	chr6	127276470	127276838	(43529141)	C	L2c	LINE/L2	(2179)	1240	822	3496662
2867	14.7	3.2	8.2	chr6	127397276	127397899	(43408080)	+	LTR14B	LTR/ERVK	17	608	(0)	3496845
3214	13.7	0.4	0.4	chr6	127397900	127398413	(43407566)	+	MER41B	LTR/ERV1	121	634	(0)	3496844
40	35.8	4.6	1.1	chr6	129608951	129609212	(41196767)	+	GA-rich	Low_complexity	1	274	(0)	3499675
8809	16.6	2.5	5.6	chr6	131141516	131143221	(39662758)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	3501910
2066	17.9	6.8	0.5	chr6	131143222	131143620	(39662359)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3501910
2873	20.2	5.3	5.0	chr6	131197433	131197751	(39608228)	C	L1MEc	LINE/L1	(5081)	1319	1001	3502001
2542	8.1	27.1	0.9	chr6	131197752	131198198	(39607781)	C	LTR14B	LTR/ERVK	(0)	608	1	3502002
538	23.3	2.3	0.8	chr6	131935129	131935257	(38870722)	+	FLAM_A	SINE/Alu	2	132	(10)	3503138
2531	13.8	2.1	6.7	chr6	131935258	131935307	(38870672)	+	L1MCa	LINE/L1	2377	2425	(4083)	3503136
754	21.7	3.2	0.0	chr6	131935312	131935463	(38870516)	C	L1MCa	LINE/L1	(5961)	547	391	3503135
918	32.1	7.5	2.0	chr6	133366035	133366485	(37439494)	C	L2a	LINE/L2	(669)	2750	2273	3505141
30	0.0	0.0	0.0	chr6	133952134	133952162	(36853817)	+	(GGCGT)n	Simple_repeat	1	29	(0)	3505928
3590	26.8	13.1	2.6	chr6	133994742	133995690	(36810289)	C	L2a	LINE/L2	(1120)	2299	1255	3505986
1306	21.4	6.1	1.9	chr6	134600435	134600810	(36205169)	+	L1ME1	LINE/L1	5583	5975	(204)	3507163
2591	4.3	5.2	0.0	chr6	134600811	134601136	(36204843)	C	LTR14A	LTR/ERVK	(0)	344	1	3507164
709	4.5	11.3	6.0	chr6	134601140	134601256	(36204723)	C	HERVK14-int	LTR/ERVK	(0)	6096	5973	3507164
1969	13.6	4.4	0.3	chr6	134604735	134605080	(36200899)	C	HERVK14-int	LTR/ERVK	(5735)	361	1	3507166
2753	5.5	0.3	0.0	chr6	134605081	134605423	(36200556)	C	LTR14A	LTR/ERVK	(0)	344	1	3507166
1316	29.8	14.4	3.3	chr6	135222596	135223074	(35582905)	+	L2	LINE/L2	1282	1828	(1591)	3508145
1534	14.6	0.8	4.6	chr6	135223075	135223335	(35582644)	C	AluJb	SINE/Alu	(0)	312	62	3508146
1316	29.8	14.4	3.3	chr6	135223336	135224085	(35581894)	+	L2	LINE/L2	1829	2670	(749)	3508145
388	25.4	2.7	0.0	chr6	135521176	135521285	(35284694)	C	L1MB8	LINE/L1	(2)	6176	6064	3508581
417	25.4	13.1	4.6	chr6	135673933	135674126	(35131853)	+	Charlie15a	DNA/hAT-Charlie	1	213	(11)	3508769
368	38.9	3.7	5.4	chr6	135674128	135674461	(35131518)	+	L2c	LINE/L2	2661	2988	(431)	3508770
2285	11.1	3.3	2.5	chr6	135930025	135930385	(34875594)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3509144
311	32.3	7.8	4.2	chr6	135930386	135930663	(34875316)	C	L2	LINE/L2	(567)	2852	2563	3509143
392	29.3	17.1	5.8	chr6	136284683	136285232	(34520747)	C	L2a	LINE/L2	(25)	3401	2767	3509614
774	20.6	13.0	0.0	chr6	136423202	136423395	(34382584)	+	MIRb	SINE/MIR	36	258	(10)	3509865
15	5.5	0.0	0.0	chr6	136423726	136423744	(34382235)	+	(A)n	Simple_repeat	1	19	(0)	3509866
1912	16.9	0.3	0.7	chr6	136720783	136721078	(34084901)	C	AluJr	SINE/Alu	(17)	295	1	3510335
304	31.2	12.4	2.4	chr6	136721189	136721434	(34084545)	+	L1MC	LINE/L1	3045	3318	(2828)	3510336
370	25.0	11.5	2.7	chr6	137832755	137832865	(32973114)	C	L2b	LINE/L2	(9)	3366	3245	3512057
195	27.0	0.0	6.0	chr6	138184302	138184368	(32621611)	+	MIRc	SINE/MIR	172	234	(34)	3512585
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
7435	4.2	0.5	0.7	chr6	139363370	139364320	(31441659)	+	L1PA6	LINE/L1	5206	6154	(0)	3514542
15	0.0	0.0	0.0	chr6	139776523	139776539	(31029440)	+	(TG)n	Simple_repeat	1	17	(0)	3515206
3041	18.0	6.0	3.7	chr6	140897539	140898219	(29907760)	C	MER61-int	LTR/ERV1	(4518)	699	2	3516606
1252	19.8	7.9	2.8	chr6	140898220	140898542	(29907437)	C	MER61A	LTR/ERV1	(0)	341	1	3516606
365	32.9	12.9	1.3	chr6	142378329	142378485	(28427494)	+	MamTip2	DNA/hAT-Tip100	33	210	(95)	3518438
228	35.0	12.0	2.2	chr6	142378675	142379033	(28426946)	+	L2	LINE/L2	1913	2311	(1108)	3518439
271	24.4	8.5	5.5	chr6	142716083	142716173	(28089806)	+	MIRb	SINE/MIR	20	113	(155)	3518879
2445	14.4	3.6	0.0	chr6	142716179	142716582	(28089397)	+	MSTB1	LTR/ERVL-MaLR	1	419	(13)	3518880
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
524	27.0	7.8	8.8	chr6	143879022	143879386	(26926593)	C	HAL1	LINE/L1	(2112)	395	35	3520536
2291	10.1	0.7	0.3	chr6	147576143	147576438	(23229541)	C	AluSx	SINE/Alu	(15)	297	1	3525585
394	22.8	3.2	1.1	chr6	147576637	147576729	(23229250)	C	MIR	SINE/MIR	(71)	191	97	3525586
458	28.2	5.4	12.5	chr6	147951446	147951575	(22854404)	C	LTR81A	LTR/Gypsy	(1216)	134	22	3526135
309	28.5	7.1	1.4	chr6	147951764	147951909	(22854070)	C	MER103C	DNA/hAT-Charlie	(7)	290	136	3526137
14	8.0	3.5	3.3	chr6	148747761	148747789	(22058190)	+	(CGC)n	Simple_repeat	1	30	(0)	3527385
1780	15.7	4.2	0.3	chr6	150292694	150292993	(20512986)	+	MSTB	LTR/ERVL-MaLR	4	315	(111)	3529987
724	11.9	0.0	2.7	chr6	150293165	150293276	(20512703)	+	MSTB	LTR/ERVL-MaLR	324	432	(0)	3529987
195	34.8	8.5	2.4	chr6	150309695	150309859	(20496120)	C	L2c	LINE/L2	(116)	3271	3096	3530014
1572	13.9	6.5	14.8	chr6	150309862	150310233	(20495746)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	3530015
342	29.7	11.8	1.9	chr6	150380549	150380754	(20425225)	C	LTR85b	LTR/Gypsy?	(36)	748	520	3530130
182	30.5	5.0	2.1	chr6	150492910	150493006	(20312973)	+	MIR3	SINE/MIR	59	158	(50)	3530295
4562	18.1	6.0	0.9	chr6	150560014	150560865	(20245114)	+	MER54A	LTR/ERVL	1	898	(3)	3530419
27	11.2	0.0	0.0	chr6	150788862	150788901	(20017078)	+	(CA)n	Simple_repeat	1	40	(0)	3530750
13	27.4	0.0	4.0	chr6	150788902	150788910	(20017069)	+	(GCAC)n	Simple_repeat	2	50	(0)	3530751
3364	17.9	5.1	3.4	chr6	151605253	151605902	(19200077)	C	L1M3f	LINE/L1	(4649)	679	20	3532325
2309	13.0	0.0	0.0	chr6	151605903	151606201	(19199778)	C	AluSx	SINE/Alu	(13)	299	1	3532327
325	37.0	5.4	6.4	chr6	154206429	154207177	(16598802)	C	L2c	LINE/L2	(0)	3387	2655	3535948
15	22.4	6.2	1.5	chr6	154231202	154231265	(16574714)	+	A-rich	Low_complexity	1	68	(0)	3535986
1529	24.6	11.3	1.7	chr6	154231273	154231996	(16573983)	+	L1MC5a	LINE/L1	255	1057	(1720)	3535987
409	28.7	2.9	0.0	chr6	154537390	154537525	(16268454)	+	hAT-N1_Mam	DNA/hAT-Tip100?	112	251	(89)	3536572
4535	6.3	6.4	0.5	chr6	156421184	156421755	(14384224)	C	LTR14B	LTR/ERVK	(0)	608	1	3539422
13	23.2	3.9	1.9	chr6	156883476	156883527	(13922452)	+	(CCTTT)n	Simple_repeat	1	54	(0)	3540140
51	29.6	4.2	1.8	chr6	158040160	158040374	(12765605)	+	(TG)n	Simple_repeat	1	224	(0)	3541856
4393	5.1	5.0	1.7	chr6	158405277	158405852	(12400127)	C	LTR14B	LTR/ERVK	(0)	608	13	3542481
2439	6.9	0.0	1.6	chr6	158995590	158995894	(11810085)	C	AluY	SINE/Alu	(7)	304	5	3543503
1575	17.8	10.6	9.3	chr6	158995895	158996093	(11809886)	C	MLT1D	LTR/ERVL-MaLR	(321)	184	8	3543502
2303	16.0	6.3	0.5	chr6	159623796	159624196	(11181783)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3544329
4230	16.7	4.1	2.7	chr6	160732359	160733195	(10072784)	C	MER21C	LTR/ERVL	(2)	936	1	3545724
386	33.7	11.8	3.6	chr6	161064360	161064722	(9741257)	C	L1ME3Cz	LINE/L1	(1169)	4977	4581	3546171
2056	20.1	1.6	0.7	chr6	161064844	161065278	(9740701)	C	MER54A	LTR/ERVL	(460)	441	3	3546178
336	28.1	5.4	8.1	chr6	161763262	161763470	(9042509)	+	MLT1O	LTR/ERVL-MaLR	330	532	(10)	3547184
202	30.1	12.8	1.6	chr6	166562566	166562690	(4243289)	C	L2b	LINE/L2	(4)	3371	3231	3553401
2089	11.9	0.6	1.0	chr6	167330276	167330587	(3475392)	+	AluSq2	SINE/Alu	1	311	(2)	3554295
573	21.5	12.4	1.2	chr6	168289602	168289766	(2516213)	+	MLT1H2	LTR/ERVL-MaLR	304	489	(0)	3555336
388	35.6	4.6	3.7	chr6	168614431	168615747	(2190232)	+	TAR1	Satellite/telo	1	1328	(552)	3555632
2155	17.4	4.0	1.2	chr6	169034228	169034641	(1771338)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3556069
2220	14.6	3.8	4.9	chr6	169095561	169095991	(1709988)	C	MSTA	LTR/ERVL-MaLR	(0)	428	3	3556129
1689	27.9	9.2	1.7	chr6	169096041	169097076	(1708903)	C	L1ME1	LINE/L1	(62)	6117	4996	3556130
10100	15.9	2.0	2.9	chr6	169272940	169273494	(1532485)	+	MER57A-int	LTR/ERV1	3188	3742	(2445)	3556292
1895	17.5	9.1	0.0	chr6	169273495	169273883	(1532096)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3556293
5008	4.6	4.0	0.3	chr6	169476050	169476635	(1329344)	+	LTR14B	LTR/ERVK	1	608	(0)	3556489
862	31.0	14.3	5.1	chr6	169476636	169477298	(1328681)	C	L1M5	LINE/L1	(1668)	4478	3687	3556487
370	18.7	0.0	0.0	chr6	169638905	169638979	(1167000)	C	L1PA16	LINE/L1	(6)	6160	6086	3556694
11	10.2	2.7	7.9	chr6	170032568	170032604	(773375)	+	(GAGCAG)n	Simple_repeat	1	38	(0)	3557079
14	24.0	0.0	0.0	chr7	455720	455758	(158890215)	+	(GCCC)n	Simple_repeat	1	39	(0)	3558370
291	23.2	3.5	4.7	chr7	745388	745473	(158600500)	C	PRIMA4-int	LTR/ERV1	(7681)	589	505	3558824
19	49.2	0.0	1.4	chr7	745542	745689	(158600284)	+	(CA)n	Simple_repeat	1	148	(0)	3558825
2239	11.3	0.0	0.0	chr7	1426282	1426572	(157919401)	+	AluSx	SINE/Alu	3	293	(19)	3559898
16	14.5	9.2	4.8	chr7	1640786	1640867	(157705106)	+	(CAGCCCCAG)n	Simple_repeat	1	85	(0)	3560231
249	31.6	7.4	11.1	chr7	1641357	1641751	(157704222)	+	L2b	LINE/L2	2966	3344	(31)	3560232
2214	11.1	0.3	1.3	chr7	2351906	2352211	(156993762)	C	AluSz	SINE/Alu	(9)	303	1	3561241
322	24.0	8.0	0.9	chr7	2352214	2352314	(156993659)	C	MLT1C	LTR/ERVL-MaLR	(283)	184	76	3561242
722	16.4	14.7	8.9	chr7	2352315	2352549	(156993424)	+	MER44A	DNA/TcMar-Tigger	1	251	(88)	3561243
18	36.6	4.2	0.8	chr7	3043373	3043491	(156302482)	+	GA-rich	Low_complexity	1	124	(0)	3562546
850	20.1	7.7	0.0	chr7	4028081	4028249	(155317724)	+	MER5A	DNA/hAT-Charlie	3	185	(4)	3564150
194	30.4	14.5	2.6	chr7	4028261	4028375	(155317598)	+	L3	LINE/CR1	379	509	(3590)	3564151
268	24.2	22.0	1.6	chr7	4028440	4028565	(155317408)	+	L3	LINE/CR1	787	945	(3154)	3564151
247	20.0	1.8	0.0	chr7	4028725	4028779	(155317194)	+	L4_A_Mam	LINE/RTE-X	1761	1816	(3174)	3564152
943	25.3	9.8	10.7	chr7	5743276	5743740	(153602233)	+	L1ME3G	LINE/L1	349	795	(129)	3567699
1235	26.4	11.2	5.6	chr7	5743747	5744424	(153601549)	+	L1MEg	LINE/L1	475	1195	(5047)	3567702
1806	18.0	11.6	0.5	chr7	7925787	7926161	(151419812)	+	MSTB	LTR/ERVL-MaLR	5	426	(0)	3571811
13	4.1	0.0	9.7	chr7	8261747	8261777	(151084196)	+	(GGTG)n	Simple_repeat	1	31	(0)	3572278
12	16.0	0.0	3.3	chr7	8262052	8262081	(151083892)	+	(CCCGC)n	Simple_repeat	1	30	(0)	3572279
394	25.3	6.4	8.7	chr7	13950825	13950899	(145395074)	+	Charlie8	DNA/hAT-Charlie	77	152	(2276)	3579398
50	0.0	0.0	0.0	chr7	13950900	13950942	(145395031)	+	(AC)n	Simple_repeat	1	43	(0)	3579399
394	22.8	7.1	12.1	chr7	13950943	13951135	(145394838)	+	Charlie8	DNA/hAT-Charlie	126	307	(24)	3579398
183	28.6	13.4	0.0	chr7	13951278	13951296	(145394677)	C	MIRb	SINE/MIR	(154)	114	83	3579400
775	24.8	4.7	2.4	chr7	13951297	13951503	(145394470)	+	MIR	SINE/MIR	2	213	(49)	3579401
411	33.2	8.1	1.4	chr7	14999232	14999429	(144346544)	+	L2	LINE/L2	1902	2112	(1307)	3580704
2113	17.8	1.6	2.8	chr7	14999430	14999862	(144346111)	+	MSTB1	LTR/ERVL-MaLR	1	428	(4)	3580706
1607	18.2	10.1	1.6	chr7	16748586	16748965	(142597008)	+	MER54A	LTR/ERVL	1	416	(485)	3582971
219	33.6	8.1	3.6	chr7	20599160	20599406	(138746567)	+	MIRb	SINE/MIR	2	260	(8)	3587970
1640	21.9	1.5	5.4	chr7	21727754	21728159	(137617814)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3589650
1679	19.9	2.5	8.1	chr7	21728174	21728237	(137617736)	C	MLT1B-int	LTR/ERVL-MaLR	(14)	1357	1299	3589650
2286	9.5	0.0	0.3	chr7	21728238	21728558	(137617415)	C	AluSx1	SINE/Alu	(0)	312	1	3589651
51	0.0	2.0	0.0	chr7	21804078	21804127	(137541846)	+	(GTTTT)n	Simple_repeat	1	51	(0)	3589757
2082	17.6	5.4	3.4	chr7	21822102	21822518	(137523455)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3589777
5505	15.8	4.5	1.2	chr7	21822519	21822957	(137523016)	C	L1MA4	LINE/L1	(536)	5764	5297	3589776
8339	12.1	10.5	7.6	chr7	22090160	22091687	(137254286)	+	LTR12C	LTR/ERV1	3	1579	(0)	3590192
447	29.6	3.8	4.3	chr7	22782981	22783167	(136562806)	+	MIRb	SINE/MIR	19	204	(64)	3591197
2428	8.3	0.0	0.0	chr7	22870916	22871216	(136474757)	+	AluSg	SINE/Alu	2	302	(8)	3591372
418	27.1	6.5	1.6	chr7	22871436	22871626	(136474347)	C	MIR	SINE/MIR	(3)	259	59	3591373
25	20.2	2.5	3.7	chr7	22871641	22871719	(136474254)	+	(TCTA)n	Simple_repeat	1	81	(0)	3591374
2017	21.7	2.0	1.8	chr7	22908672	22909093	(136436880)	+	MER77	LTR/ERVL	1	459	(145)	3591442
2353	14.8	6.8	0.0	chr7	22909094	22909492	(136436481)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3591443
2202	7.4	0.0	0.7	chr7	23642008	23642291	(135703682)	C	AluSc8	SINE/Alu	(8)	303	22	3592774
1555	13.9	9.6	3.2	chr7	24568129	24568351	(134777622)	C	MER44A	DNA/TcMar-Tigger	(85)	254	5	3594099
4049	15.0	4.8	1.4	chr7	24882125	24883074	(134462899)	C	L1PB4	LINE/L1	(12)	6144	5146	3594524
251	38.4	8.6	3.0	chr7	25455651	25455988	(133889985)	+	L2b	LINE/L2	3015	3373	(2)	3595458
442	30.2	6.7	0.6	chr7	25648378	25648560	(133697413)	C	MamRep137	DNA/TcMar-Tigger	(1)	509	315	3595742
1331	18.0	13.2	0.0	chr7	26082433	26082716	(133263257)	+	MER58B	DNA/hAT-Charlie	1	327	(14)	3596381
330	29.6	18.1	3.6	chr7	26357464	26358077	(132987896)	C	L2b	LINE/L2	(499)	2920	2198	3596929
2279	16.8	4.2	0.0	chr7	27618634	27619043	(131726930)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3598739
7831	19.2	2.0	2.9	chr7	27619044	27620039	(131725934)	+	L1M2	LINE/L1	2030	3038	(4528)	3598738
2086	10.7	5.5	0.7	chr7	27661319	27661609	(131684364)	+	AluJb	SINE/Alu	1	306	(6)	3598811
204	36.4	2.5	4.5	chr7	28431737	28431961	(130914012)	C	L2b	LINE/L2	(353)	3066	2838	3600054
20	7.8	0.0	0.0	chr7	28431983	28432009	(130913964)	+	(T)n	Simple_repeat	1	27	(0)	3600058
2635	10.8	3.3	0.6	chr7	28444927	28445280	(130900693)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3600076
2846	5.5	0.0	0.0	chr7	28445541	28445850	(130900123)	C	AluY	SINE/Alu	(1)	310	1	3600077
385	28.0	6.0	2.6	chr7	28858938	28859100	(130486873)	C	MIR	SINE/MIR	(79)	183	6	3600681
479	29.4	5.9	11.4	chr7	29812316	29812780	(129533193)	C	MLT1J	LTR/ERVL-MaLR	(73)	439	2	3602162
1871	17.6	13.1	0.2	chr7	30181343	30181740	(129164233)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	3602750
3994	11.1	0.5	5.0	chr7	31946201	31946835	(127399138)	+	LTR14B	LTR/ERVK	3	608	(0)	3605414
2164	23.7	1.9	4.3	chr7	31946836	31947206	(127398767)	C	L1MCa	LINE/L1	(5673)	1078	636	3605413
1890	20.5	4.9	0.3	chr7	33721758	33722105	(125623868)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	3608267
473	28.9	13.0	4.5	chr7	35733439	35733684	(123612289)	C	L2b	LINE/L2	(0)	3375	3106	3611119
410	32.1	12.3	6.1	chr7	35733683	35734268	(123611705)	C	L2c	LINE/L2	(0)	3387	2763	3611120
1149	14.8	0.0	0.0	chr7	36389365	36389526	(122956447)	C	AluJb	SINE/Alu	(14)	298	137	3612221
2416	17.2	1.7	1.0	chr7	37106206	37106610	(122239363)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3613283
12226	12.6	1.5	2.3	chr7	38659802	38660384	(120685589)	+	L1PA16	LINE/L1	906	1469	(5384)	3615457
1717	16.8	2.1	0.7	chr7	38660385	38660670	(120685303)	C	AluJr	SINE/Alu	(22)	290	1	3615458
585	28.6	4.3	3.6	chr7	39329981	39330256	(120015717)	C	HAL1	LINE/L1	(5)	2502	2225	3616377
369	26.6	13.1	0.6	chr7	39330392	39330565	(120015408)	C	HAL1ME	LINE/L1	(288)	2177	1979	3616378
2469	6.4	7.0	0.0	chr7	39903728	39904057	(119441916)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3617382
10989	15.2	5.1	6.5	chr7	39904058	39904637	(119441336)	+	L1MCa	LINE/L1	593	1147	(5361)	3617380
16	20.8	4.3	2.1	chr7	42264861	42264914	(117081059)	+	GA-rich	Low_complexity	1	55	(0)	3620988
20176	17.2	3.0	3.3	chr7	42950142	42950476	(116395497)	+	ERV24B_Prim-int	LTR/ERV1	3105	3456	(4157)	3621888
2040	14.2	11.2	1.3	chr7	42950477	42950861	(116395112)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3621891
2575	23.6	9.7	4.9	chr7	43633765	43635049	(115710924)	C	L1MDa	LINE/L1	(4996)	1637	34	3622900
1045	31.4	4.8	3.2	chr7	47086090	47086644	(112259329)	+	LTR84a	LTR/ERVL	30	620	(141)	3628092
12	3.5	13.8	0.0	chr7	50277539	50277567	(109068406)	+	(CTTCCT)n	Simple_repeat	1	33	(0)	3632196
104	25.1	3.4	3.0	chr7	52413879	52414233	(106931740)	+	A-rich	Low_complexity	1	367	(0)	3634874
605	25.7	9.2	0.0	chr7	55361733	55361950	(103984023)	C	MER88	LTR/ERVL	(78)	386	147	3638521
2372	17.3	4.0	3.2	chr7	55361952	55361984	(103983989)	C	MER31A	LTR/ERV1	(10)	475	446	3638522
1730	17.1	18.2	0.0	chr7	55361985	55362330	(103983643)	C	MSTC	LTR/ERVL-MaLR	(1)	427	5	3638523
2883	19.2	4.1	5.1	chr7	55873363	55873784	(103472189)	+	MER92-int	LTR/ERV1	3180	3602	(1616)	3639401
2451	8.4	1.8	0.0	chr7	55873785	55874118	(103471855)	C	LTR14A	LTR/ERVK	(0)	344	5	3639403
2883	19.2	4.1	5.1	chr7	55874119	55874204	(103471769)	+	MER92-int	LTR/ERV1	3603	3689	(1529)	3639401
2499	8.4	0.3	0.0	chr7	55951348	55951657	(103394316)	+	AluSz	SINE/Alu	1	311	(1)	3639567
285	26.0	7.6	0.0	chr7	55952299	55952371	(103393602)	C	MIRb	SINE/MIR	(79)	189	111	3639568
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
1851	23.7	2.5	0.5	chr7	64536259	64536656	(94809317)	C	MSTB	LTR/ERVL-MaLR	(20)	406	1	3646394
483	28.9	2.0	7.5	chr7	64536657	64536788	(94809185)	+	L1MB2	LINE/L1	2860	2977	(3399)	3646380
332	25.0	6.4	6.4	chr7	65086592	65086732	(94259241)	C	Charlie4z	DNA/hAT-Charlie	(10)	157	17	3647237
326	27.6	3.5	11.1	chr7	65395353	65395482	(93950491)	C	L1MB2	LINE/L1	(3405)	2977	2860	3647778
924	24.0	0.0	0.0	chr7	65395483	65395674	(93950299)	+	MSTB	LTR/ERVL-MaLR	1	192	(234)	3647783
578	26.3	3.5	1.8	chr7	65395681	65395909	(93950064)	C	L1MB2	LINE/L1	(3694)	2682	2451	3647778
1465	20.1	1.4	1.4	chr7	65395910	65396188	(93949785)	C	AluJb	SINE/Alu	(10)	302	24	3647784
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
84	11.5	0.0	0.0	chr7	65489745	65489886	(93856087)	+	(CCATT)n	Simple_repeat	1	142	(0)	3647902
383	14.3	3.1	0.0	chr7	65489887	65489949	(93856024)	C	AluYj4	SINE/Alu	(22)	289	225	3647903
85	11.3	0.7	0.6	chr7	65489965	65490119	(93855854)	+	(TTCCA)n	Simple_repeat	1	156	(0)	3647904
48	19.0	0.9	2.6	chr7	65490120	65490168	(93855805)	+	(CTCCA)n	Simple_repeat	1	48	(0)	3647905
1572	23.8	11.6	1.4	chr7	66228936	66229117	(93116856)	C	L1ME1	LINE/L1	(1658)	6127	5895	3649574
2467	6.9	0.7	0.0	chr7	66229118	66229408	(93116565)	C	AluY	SINE/Alu	(17)	294	2	3649575
2428	13.5	2.6	6.1	chr7	66342501	66342942	(93003031)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3649781
3180	20.0	4.4	6.7	chr7	66342943	66343246	(93002727)	+	L1MCb	LINE/L1	502	796	(5249)	3649780
1523	19.9	6.9	3.4	chr7	66725182	66725560	(92620413)	C	L1MB8	LINE/L1	(3)	6175	5783	3650679
2096	13.9	0.0	2.2	chr7	68027823	68028139	(91317834)	+	AluJb	SINE/Alu	1	310	(2)	3653569
344	31.3	6.2	2.4	chr7	71048246	71048415	(88297558)	C	MER5B	DNA/hAT-Charlie	(1)	177	1	3659378
573	22.8	8.3	8.6	chr7	71073705	71073838	(88272135)	+	L1MC4a	LINE/L1	5945	6093	(1789)	3659418
2869	3.8	0.6	0.0	chr7	71073839	71074180	(88271793)	+	LTR14A	LTR/ERVK	1	344	(0)	3659419
573	22.8	8.3	8.6	chr7	71074181	71074323	(88271650)	+	L1MC4a	LINE/L1	6094	6220	(1662)	3659418
2305	14.8	6.7	3.0	chr7	72459878	72460281	(86885692)	C	MSTB	LTR/ERVL-MaLR	(6)	420	1	3662365
749	23.2	15.0	6.5	chr7	72828500	72828723	(86517250)	+	L1MC5a	LINE/L1	2371	2625	(152)	3663155
1193	15.1	0.6	0.6	chr7	74279340	74279518	(85066455)	C	AluSz6	SINE/Alu	(10)	302	124	3666660
1097	18.8	0.5	0.0	chr7	74279824	74280025	(85065948)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	188	3666661
36	0.0	0.0	0.0	chr7	75639563	75639593	(83706380)	+	(GT)n	Simple_repeat	1	31	(0)	3670121
635	12.9	2.3	0.3	chr7	76303268	76303404	(83042569)	+	FLAM_C	SINE/Alu	22	166	(0)	3671828
227	25.7	8.6	0.0	chr7	76317773	76317846	(83028127)	+	MIRb	SINE/MIR	129	209	(59)	3671860
12	21.8	0.0	6.2	chr7	76796256	76796303	(82549670)	+	(TCTCCT)n	Simple_repeat	1	48	(0)	3672763
875	29.8	12.2	5.8	chr7	77469158	77469475	(81876498)	+	L2	LINE/L2	2318	2641	(778)	3673822
709	21.7	16.5	3.9	chr7	77469476	77469811	(81876162)	+	MLT1B	LTR/ERVL-MaLR	4	390	(0)	3673823
875	29.8	12.2	5.8	chr7	77469812	77470098	(81875875)	+	L2	LINE/L2	2642	2967	(452)	3673822
1364	19.9	1.5	3.2	chr7	80509841	80510183	(78835790)	C	L1MA8	LINE/L1	(2)	6289	5953	3678300
1897	14.6	7.7	2.6	chr7	80532813	80533157	(78812816)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3678327
2059	9.9	9.6	4.4	chr7	80533159	80533570	(78812403)	C	LTR14B	LTR/ERVK	(0)	608	3	3678328
1860	19.3	6.5	1.8	chr7	81672992	81673434	(77672539)	+	MSTA1	LTR/ERVL-MaLR	1	465	(0)	3679827
4136	7.9	3.8	0.5	chr7	83263382	83263966	(76082007)	+	LTR14B	LTR/ERVK	4	608	(0)	3682034
696	30.5	7.6	5.8	chr7	84372801	84373176	(74972797)	+	MLT1H	LTR/ERVL-MaLR	2	384	(165)	3683469
277	26.9	6.9	0.0	chr7	86281992	86282099	(73063874)	+	L1ME3A	LINE/L1	4781	4896	(1250)	3685767
2516	14.3	7.3	3.1	chr7	86282103	86282708	(73063265)	C	LTR12C	LTR/ERV1	(944)	635	3	3685768
748	15.0	17.7	0.7	chr7	92447150	92447303	(66898670)	+	MER53	DNA/hAT	3	188	(5)	3693907
225	0.0	0.0	0.0	chr7	92447312	92447336	(66898637)	+	Charlie1b	DNA/hAT-Charlie	495	519	(4)	3693908
404	21.1	7.6	0.9	chr7	92527571	92527680	(66818293)	+	MER94B	DNA/hAT-Blackjack	8	125	(8)	3694021
25	7.3	4.3	4.1	chr7	92778911	92778957	(66567016)	+	(AT)n	Simple_repeat	1	49	(0)	3694403
969	29.9	7.7	2.9	chr7	93156573	93156992	(66188981)	+	LTR16E2	LTR/ERVL	93	534	(34)	3694883
13	16.0	0.0	3.2	chr7	94656131	94656161	(64689812)	+	(CTCCC)n	Simple_repeat	1	31	(0)	3696936
180	32.9	6.4	2.7	chr7	99099328	99099402	(60246571)	+	L2b	LINE/L2	3277	3354	(21)	3703960
1820	18.9	7.2	7.8	chr7	99099543	99099977	(60245996)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3703961
8244	16.4	4.8	3.1	chr7	99114265	99115311	(60230662)	+	L1M4	LINE/L1	2730	3807	(2837)	3703987
1690	18.0	5.9	0.3	chr7	99115312	99115600	(60230373)	+	AluJb	SINE/Alu	1	306	(6)	3703989
2242	11.8	0.0	0.0	chr7	99158868	99159163	(60186810)	C	AluSx	SINE/Alu	(15)	297	2	3704073
818	23.9	10.2	4.8	chr7	99159164	99159197	(60186776)	C	HAL1	LINE/L1	(1478)	1029	997	3704069
1156	13.2	0.0	0.6	chr7	99159202	99159368	(60186605)	+	AluJr	SINE/Alu	137	302	(10)	3704074
1559	25.6	6.4	5.8	chr7	99159457	99160011	(60185962)	C	L1MC5	LINE/L1	(2)	9302	8738	3704075
2221	17.6	7.5	0.5	chr7	99931637	99932059	(59413914)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	3	3705518
1619	20.7	2.2	1.0	chr7	99932060	99932326	(59413647)	+	MLT1A0	LTR/ERVL-MaLR	93	365	(0)	3705515
1416	24.1	12.5	8.6	chr7	105603289	105603459	(53742514)	+	MER50	LTR/ERV1	565	734	(0)	3716222
1121	17.6	5.5	4.2	chr7	105603460	105603590	(53742383)	C	AluJb	SINE/Alu	(96)	216	85	3716221
192	26.1	14.7	1.9	chr7	105603676	105603835	(53742138)	+	L2b	LINE/L2	2775	2958	(461)	3716219
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
3059	23.6	6.1	1.4	chr7	106735380	106736643	(52609330)	C	L1M4c	LINE/L1	(4341)	2043	796	3717977
803	33.9	6.6	3.8	chr7	108668724	108669242	(50676731)	+	L2a	LINE/L2	2573	3101	(274)	3720874
230	29.8	0.9	7.3	chr7	117238337	117238459	(42107514)	C	MamGypLTR1a	LTR/Gypsy	(19)	784	670	3732272
244	32.3	7.5	0.8	chr7	117238799	117238923	(42107050)	C	MamGypLTR1a	LTR/Gypsy	(638)	146	13	3732272
1170	24.1	3.7	1.5	chr7	120843348	120843780	(38502193)	+	MER74A	LTR/ERVL	74	558	(0)	3736891
14	12.5	0.0	0.0	chr7	120857964	120857989	(38487984)	+	(CCG)n	Simple_repeat	1	26	(0)	3736916
18	4.8	0.0	0.0	chr7	120857994	120858015	(38487958)	+	(A)n	Simple_repeat	1	22	(0)	3736917
3716	17.3	10.5	0.3	chr7	126644927	126645662	(32700311)	+	LTR8B	LTR/ERV1	1	820	(0)	3744695
515	32.9	13.0	3.4	chr7	127357978	127358599	(31987374)	+	L2c	LINE/L2	2265	2955	(464)	3745626
229	32.8	1.7	0.0	chr7	127578734	127578791	(31767182)	+	MIRc	SINE/MIR	22	80	(188)	3745948
812	23.8	8.3	7.5	chr7	128142225	128142570	(31203403)	+	HAL1	LINE/L1	680	1028	(1479)	3746683
243	33.8	1.2	0.0	chr7	128142573	128142652	(31203321)	+	L1MEh	LINE/L1	9	89	(2146)	3746684
1154	27.1	12.1	8.3	chr7	128142747	128143524	(31202449)	+	L1MEh	LINE/L1	322	1132	(1103)	3746684
2133	11.9	1.4	0.0	chr7	128284639	128284931	(31061042)	+	AluSx	SINE/Alu	1	297	(15)	3746956
18	20.1	5.1	1.6	chr7	128830223	128830281	(30515692)	+	(CGCGG)n	Simple_repeat	1	62	(0)	3748031
14	16.6	2.3	4.4	chr7	128830388	128830431	(30515542)	+	(CCCGG)n	Simple_repeat	1	45	(0)	3748032
12	21.0	5.1	0.0	chr7	128830473	128830511	(30515462)	+	(GCCGC)n	Simple_repeat	1	41	(0)	3748033
33	9.6	0.0	0.0	chr7	130273579	130273624	(29072349)	+	(AC)n	Simple_repeat	1	46	(0)	3750882
27	8.2	0.0	0.0	chr7	130273663	130273701	(29072272)	+	(T)n	Simple_repeat	1	39	(0)	3750883
2074	10.7	0.0	4.9	chr7	131043497	131043804	(28302169)	+	AluSz	SINE/Alu	1	293	(19)	3752025
2559	15.3	1.9	1.6	chr7	131338804	131339236	(28006737)	+	Tigger2a	DNA/TcMar-Tigger	1	434	(0)	3752624
2125	12.4	2.0	0.0	chr7	131339423	131339712	(28006261)	+	AluSz	SINE/Alu	1	296	(16)	3752625
478	29.9	7.2	7.5	chr7	132561249	132561274	(26784699)	+	L2c	LINE/L2	3108	3134	(253)	3754575
1618	12.2	1.0	1.0	chr7	132561275	132564422	(26781551)	+	(CCT)n	Simple_repeat	1	3179	(0)	3754576
6480	18.9	2.6	3.7	chr7	133831310	133832807	(25513166)	C	L1MC3	LINE/L1	(655)	7130	5650	3756543
1682	15.7	1.9	1.6	chr7	134804797	134805114	(24540859)	C	LTR8	LTR/ERV1	(0)	691	373	3758066
1130	27.6	7.4	3.3	chr7	134805115	134805683	(24540290)	C	HAL1	LINE/L1	(1136)	1371	778	3758065
4306	8.2	5.0	0.3	chr7	135276317	135276893	(24069080)	C	LTR14B	LTR/ERVK	(0)	608	4	3758680
1691	5.6	1.0	0.0	chr7	136037583	136037780	(23308193)	C	AluY	SINE/Alu	(15)	296	97	3760028
781	18.3	2.0	11.2	chr7	136037781	136037940	(23308033)	C	MSTB	LTR/ERVL-MaLR	(230)	196	51	3760027
2318	8.8	2.6	0.0	chr7	136037941	136038234	(23307739)	C	AluSq	SINE/Alu	(11)	302	1	3760029
3393	26.6	14.0	0.4	chr7	136259161	136260368	(23085605)	C	Arthur1	DNA/hAT-Tip100	(2503)	1444	62	3760369
17	12.5	0.0	5.1	chr7	136260413	136260451	(23085522)	+	(TCTT)n	Simple_repeat	1	39	(0)	3760370
1906	10.2	9.1	4.6	chr7	136260544	136260957	(23085016)	C	LTR14B	LTR/ERVK	(0)	608	3	3760371
5181	6.8	0.3	0.1	chr7	136263699	136264395	(23081578)	C	HERVK14-int	LTR/ERVK	(5398)	698	1	3760372
2351	9.7	5.1	2.7	chr7	136264396	136264819	(23081154)	C	LTR14B	LTR/ERVK	(0)	608	1	3760372
1703	16.1	3.0	1.4	chr7	138314625	138314915	(21031058)	+	AluJo	SINE/Alu	1	296	(16)	3763357
2588	18.4	6.5	0.2	chr7	138314926	138315414	(21030559)	C	MER21B	LTR/ERVL	(23)	845	324	3763339
2134	12.9	0.0	0.3	chr7	138315422	138315716	(21030257)	C	AluSz	SINE/Alu	(18)	294	1	3763358
2781	3.9	1.2	0.3	chr7	138339205	138339537	(21006436)	+	LTR14A	LTR/ERVK	9	344	(0)	3763399
31349	6.3	0.6	0.4	chr7	138339538	138343412	(21002561)	+	HERVK14-int	LTR/ERVK	1	3883	(2213)	3763399
780	4.5	11.3	5.2	chr7	138345392	138345507	(21000466)	+	HERVK14-int	LTR/ERVK	5962	6085	(11)	3763399
2777	5.9	1.2	0.0	chr7	138345520	138345859	(21000114)	+	LTR14A	LTR/ERVK	1	344	(0)	3763402
979	25.6	4.6	3.1	chr7	138345860	138346229	(20999744)	C	MLT1H1	LTR/ERVL-MaLR	(204)	387	9	3763397
16	20.5	0.0	0.0	chr7	138460183	138460221	(20885752)	+	G-rich	Low_complexity	1	39	(0)	3763674
14	16.1	0.0	0.0	chr7	138460459	138460486	(20885487)	+	GA-rich	Low_complexity	1	28	(0)	3763675
239	27.3	6.9	10.4	chr7	138955059	138955193	(20390780)	C	L2c	LINE/L2	(5)	3382	3253	3764611
6179	23.4	5.2	5.8	chr7	139114381	139116488	(20229485)	C	ERV3-16A3_I-int	LTR/ERVL	(1534)	3692	1600	3764950
1198	28.6	5.9	2.3	chr7	139229241	139229816	(20116157)	+	Charlie9	DNA/hAT-Charlie	2155	2752	(5)	3765157
225	27.4	1.9	0.0	chr7	139229855	139229905	(20116068)	C	MER102b	DNA/hAT-Charlie	(289)	52	1	3765158
485	21.2	5.7	0.8	chr7	139861655	139861787	(19484186)	C	L1MC5	LINE/L1	(940)	8364	8225	3766321
331	15.6	3.8	1.3	chr7	139861796	139861873	(19484100)	C	MLT1D	LTR/ERVL-MaLR	(106)	399	320	3766322
804	29.5	19.8	1.1	chr7	139862010	139862760	(19483213)	C	L2	LINE/L2	(860)	2559	1634	3766323
2191	11.8	0.0	0.0	chr7	140538819	140539123	(18806850)	C	AluSz	SINE/Alu	(7)	305	1	3767710
199	33.8	0.0	1.5	chr7	140539285	140539350	(18806623)	C	MIR3	SINE/MIR	(4)	204	140	3767711
312	30.3	13.4	2.1	chr7	141450763	141450907	(17895066)	C	MIRb	SINE/MIR	(59)	209	46	3769301
3483	7.6	12.9	1.7	chr7	145171529	145172064	(14173909)	+	LTR14B	LTR/ERVK	4	608	(0)	3774278
489	18.2	2.5	17.6	chr7	145172065	145172219	(14173754)	+	MER112	DNA/hAT-Charlie	31	160	(101)	3774277
442	29.0	4.0	5.1	chr7	146635722	146635899	(12710074)	+	MamTip3	DNA/hAT-Tip100	322	497	(3)	3776187
701	26.0	1.8	7.2	chr7	146636091	146636326	(12709647)	+	L1ME1	LINE/L1	5938	6160	(19)	3776188
658	25.0	11.6	5.6	chr7	148262801	148262969	(11083004)	C	MER90	LTR/ERV1	(390)	185	5	3778485
26	2.6	4.9	2.3	chr7	149091051	149091091	(10254882)	+	(CAGGGA)n	Simple_repeat	1	43	(0)	3780003
2370	6.8	6.1	0.3	chr7	149612728	149613051	(9732922)	+	LTR14A	LTR/ERVK	1	344	(0)	3780936
641	5.4	0.0	0.0	chr7	149613063	149613136	(9732837)	C	tRNA-Cys-TGY	tRNA	(1)	74	1	3780937
531	29.9	6.6	3.2	chr7	149874463	149874652	(9471321)	+	MIRb	SINE/MIR	72	268	(0)	3781259
700	27.7	9.7	0.0	chr7	150069065	150069324	(9276649)	C	Charlie4a	DNA/hAT-Charlie	(220)	288	1	3781520
599	30.5	5.4	4.4	chr7	150456782	150456950	(8889023)	+	L1ME3Cz	LINE/L1	4933	5106	(1040)	3782101
3070	12.6	5.3	0.4	chr7	150456951	150457437	(8888536)	C	MER9a3	LTR/ERVK	(0)	512	1	3782106
1662	21.2	13.0	3.6	chr7	150561073	150561601	(8784372)	C	LTR14C	LTR/ERVK	(0)	587	2	3782204
17	14.7	5.2	4.9	chr7	150947790	150947847	(8398126)	+	(CCCCGG)n	Simple_repeat	1	61	(0)	3782698
328	26.2	4.6	1.5	chr7	150948216	150948353	(8397620)	C	L2c	LINE/L2	(208)	3179	3028	3782699
220	32.1	9.6	2.0	chr7	151173824	151174074	(8171899)	+	L2b	LINE/L2	2413	2684	(735)	3783002
230	21.1	1.3	9.5	chr7	151174112	151174195	(8171778)	+	L2b	LINE/L2	3084	3160	(215)	3783002
223	32.5	9.6	0.0	chr7	151200821	151200971	(8145002)	C	MIR3	SINE/MIR	(12)	196	30	3783045
944	23.9	14.8	8.9	chr7	151547781	151548159	(7797814)	C	L1MC5	LINE/L1	(229)	9075	8663	3783639
1079	19.6	10.3	0.0	chr7	151777339	151777609	(7568364)	+	MSTB1	LTR/ERVL-MaLR	1	302	(130)	3784030
3894	17.1	7.9	0.5	chr7	151777610	151778363	(7567610)	+	LTR8B	LTR/ERV1	1	814	(6)	3784031
18	23.4	4.0	3.9	chr7	151877458	151877532	(7468441)	+	(CGC)n	Simple_repeat	1	78	(0)	3784167
20	0.0	0.0	6.1	chr7	151877792	151877824	(7468149)	+	(CCACC)n	Simple_repeat	1	33	(0)	3784168
1448	16.2	7.7	0.0	chr7	152278010	152278262	(7067711)	+	MSTA	LTR/ERVL-MaLR	1	274	(154)	3784796
1344	10.1	0.0	1.1	chr7	152278269	152278447	(7067526)	C	AluSg4	SINE/Alu	(2)	308	132	3784797
889	15.1	3.3	0.7	chr7	152278448	152278594	(7067379)	+	MSTA	LTR/ERVL-MaLR	267	417	(9)	3784796
778	32.0	8.9	2.8	chr7	152361981	152362443	(6983530)	C	L2a	LINE/L2	(31)	3395	2885	3784944
1013	13.2	7.8	0.0	chr7	155220723	155220911	(4125062)	C	MSTA	LTR/ERVL-MaLR	(223)	205	1	3789368
486	20.3	9.2	1.4	chr7	156639458	156639597	(2706376)	+	L1MEc	LINE/L1	37	188	(6212)	3791164
16	3.6	6.5	3.0	chr7	157003946	157003977	(2341996)	+	(GGA)n	Simple_repeat	1	33	(0)	3791698
3979	16.3	3.0	3.8	chr7	157447325	157448009	(1897964)	C	L1MB3	LINE/L1	(10)	6173	5483	3792485
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
524	28.9	8.0	0.9	chr7	159290662	159290895	(55078)	C	MIR	SINE/MIR	(8)	254	2	3794288
181	30.1	11.0	2.7	chr7	159290907	159290981	(54992)	+	L2	LINE/L2	99	180	(3239)	3794289
1253	22.4	8.0	3.9	chr8	896496	896853	(144241783)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3795284
190	33.0	8.5	0.0	chr8	1339609	1339705	(143798931)	C	MIRb	SINE/MIR	(45)	223	118	3795660
194	32.5	10.9	0.0	chr8	1797067	1797180	(143341456)	+	L2	LINE/L2	1819	1946	(1473)	3796110
331	33.3	11.8	1.3	chr8	1797337	1797713	(143340923)	+	L2	LINE/L2	2255	2676	(743)	3796110
819	21.6	6.6	0.2	chr8	2246998	2247264	(142891372)	C	MLT2B2	LTR/ERVL	(0)	567	229	3796613
877	24.2	4.7	8.4	chr8	2472261	2472610	(142666026)	+	MLT2B2	LTR/ERVL	221	554	(0)	3796839
1813	14.5	7.6	7.2	chr8	7837935	7838398	(137300238)	+	MER4B	LTR/ERV1	1	714	(186)	3803836
2271	12.8	0.0	0.6	chr8	7838399	7838711	(137299925)	+	AluSz	SINE/Alu	2	312	(0)	3803837
289	27.1	5.1	0.0	chr8	9555421	9555524	(135583112)	C	MIRb	SINE/MIR	(15)	253	130	3806713
2002	19.9	6.6	0.2	chr8	9981706	9982103	(135156533)	C	MSTB	LTR/ERVL-MaLR	(0)	426	2	3807388
431	30.6	2.3	3.4	chr8	9982118	9982293	(135156343)	+	LTR67B	LTR/ERVL	1	174	(446)	3807389
16	18.6	6.1	0.0	chr8	10054373	10054421	(135084215)	+	(CCGCCCG)n	Simple_repeat	1	52	(0)	3807508
13	25.6	5.5	2.6	chr8	10054401	10054473	(135084163)	+	(CCGCTG)n	Simple_repeat	1	77	(0)	3807509
519	20.8	7.8	4.9	chr8	10162248	10162409	(134976227)	+	MLT1A0	LTR/ERVL-MaLR	84	250	(115)	3807663
402	27.3	7.8	2.5	chr8	10162701	10162858	(134975778)	C	MIRb	SINE/MIR	(45)	223	57	3807664
2195	15.1	5.1	7.7	chr8	11171392	11171770	(133966866)	+	MSTB1	LTR/ERVL-MaLR	1	394	(38)	3809197
475	34.5	10.7	2.6	chr8	11979289	11979717	(133158919)	C	L2	LINE/L2	(821)	2598	2131	3810495
399	20.2	7.7	0.0	chr8	11979768	11979851	(133158785)	+	THE1D	LTR/ERVL-MaLR	1	91	(290)	3810496
507	34.9	5.0	1.7	chr8	11979857	11980145	(133158491)	C	L2	LINE/L2	(567)	2852	2554	3810497
335	32.8	7.8	3.2	chr8	11980185	11980430	(133158206)	C	L2	LINE/L2	(2873)	546	289	3810497
4012	9.5	4.6	0.3	chr8	16499343	16499921	(128638715)	+	LTR14B	LTR/ERVK	4	608	(0)	3816843
572	22.4	0.0	7.5	chr8	16499922	16500000	(128638636)	C	L1MA7	LINE/L1	(91)	6200	6130	3816842
1210	19.7	1.6	0.0	chr8	17906954	17907202	(127231434)	+	MER58B	DNA/hAT-Charlie	79	331	(10)	3818927
364	21.3	2.6	11.7	chr8	17907211	17907444	(127231192)	C	LTR14A	LTR/ERVK	(46)	298	181	3818928
1321	14.2	0.0	0.0	chr8	18125016	18125234	(127013402)	C	AluSx	SINE/Alu	(0)	312	100	3819218
1953	16.3	1.9	1.1	chr8	18125238	18125596	(127013040)	C	MSTB	LTR/ERVL-MaLR	(61)	365	4	3819219
2242	9.3	0.3	3.5	chr8	18125678	18125987	(127012649)	C	AluSx1	SINE/Alu	(12)	300	1	3819220
5225	18.0	7.5	1.7	chr8	19228555	19229513	(125909123)	C	LTR28	LTR/ERV1	(0)	1020	1	3820872
2357	9.2	0.3	0.0	chr8	22954850	22955143	(122183493)	+	AluSz	SINE/Alu	1	295	(17)	3827102
634	23.2	5.3	2.4	chr8	22955144	22955266	(122183370)	+	L1M5	LINE/L1	5195	5329	(833)	3827101
599	18.3	8.6	9.1	chr8	23720293	23720382	(121418254)	C	L2a	LINE/L2	(1340)	2079	1989	3828403
31	18.9	2.9	1.4	chr8	23720795	23720864	(121417772)	+	(TC)n	Simple_repeat	1	72	(0)	3828407
845	23.1	5.0	9.7	chr8	26350704	26350871	(118787765)	C	L1M5	LINE/L1	(766)	5396	5231	3832591
808	16.4	0.0	2.2	chr8	26350872	26351005	(118787631)	+	FLAM_C	SINE/Alu	3	133	(10)	3832594
845	23.0	5.0	9.7	chr8	26351006	26351217	(118787419)	C	L1M5	LINE/L1	(916)	5230	5036	3832591
3529	8.0	5.4	16.7	chr8	28090517	28090664	(117047972)	+	LTR66	LTR/ERVL	430	610	(0)	3835534
2583	10.0	3.8	7.7	chr8	28090665	28090899	(117047737)	C	MER4D1	LTR/ERV1	(200)	700	480	3835532
4449	7.2	3.8	0.2	chr8	35931386	35931971	(109206665)	C	LTR14B	LTR/ERVK	(0)	608	1	3848226
3035	12.4	5.2	0.0	chr8	38095130	38095580	(107043056)	+	MER9a3	LTR/ERVK	37	512	(0)	3851625
2512	9.0	1.9	0.6	chr8	38095581	38095939	(107042697)	+	THE1C-int	LTR/ERVL-MaLR	1217	1580	(0)	3851623
646	22.1	3.9	0.0	chr8	38230926	38231097	(106907539)	C	AluJr	SINE/Alu	(14)	298	120	3851936
1613	16.5	1.1	4.8	chr8	38857247	38857562	(106281074)	C	AluJo	SINE/Alu	(0)	312	1	3853071
265	37.5	9.3	0.6	chr8	41324572	41324748	(103813888)	C	MIRb	SINE/MIR	(15)	253	60	3856805
404	20.8	13.3	7.1	chr8	41603547	41603624	(103535012)	C	MER5B	DNA/hAT-Charlie	(62)	116	24	3857320
528	27.9	10.0	3.1	chr8	41603634	41603892	(103534744)	+	MLT1G3	LTR/ERVL-MaLR	131	409	(186)	3857322
31	0.0	0.0	0.0	chr8	41603897	41603925	(103534711)	+	(GAAT)n	Simple_repeat	1	29	(0)	3857323
3396	11.9	9.6	3.4	chr8	43565163	43565729	(101572907)	+	LTR14B	LTR/ERVK	3	608	(0)	3860619
1217	18.7	1.8	2.8	chr8	43565730	43567839	(101570797)	C	GSATX	Satellite/centr	(47)	2087	1	3860620
773	32.4	6.3	2.0	chr8	49209629	49210034	(95928602)	C	LTR16A	LTR/ERVL	(16)	435	11	3864163
34513	8.5	2.3	1.9	chr8	49427552	49435007	(95703629)	+	HERV9-int	LTR/ERV1	1	8436	(0)	3864428
1358	24.5	11.1	4.3	chr8	55906947	55907556	(89231080)	+	L1ME2	LINE/L1	5476	6143	(21)	3873174
1958	13.7	0.4	0.0	chr8	55907589	55907866	(89230770)	+	AluJo	SINE/Alu	5	283	(29)	3873175
19	28.7	0.0	1.5	chr8	55907868	55907932	(89230704)	+	(ATAA)n	Simple_repeat	1	65	(0)	3873176
1902	14.5	0.0	4.3	chr8	56507995	56508319	(88630317)	+	AluJb	SINE/Alu	2	312	(0)	3874029
2441	27.5	18.7	1.5	chr8	56688187	56689526	(88449110)	C	L2a	LINE/L2	(696)	2723	1100	3874294
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
18	18.6	4.3	2.1	chr8	57542618	57542663	(87595973)	+	(TA)n	Simple_repeat	1	48	(0)	3875466
2459	20.2	3.1	1.9	chr8	58202884	58203417	(86935219)	+	MLT2B3	LTR/ERVL	13	553	(1)	3876285
12292	21.4	4.6	1.2	chr8	58211499	58215848	(86922788)	+	L1M2	LINE/L1	2	4561	(2287)	3876291
213	26.6	0.0	2.1	chr8	58318791	58318844	(86819792)	+	L2c	LINE/L2	3236	3315	(72)	3876427
12	16.6	4.5	4.3	chr8	58318916	58318959	(86819677)	+	(AATTAT)n	Simple_repeat	1	46	(0)	3876428
290	22.7	11.1	0.0	chr8	58576838	58576925	(86561711)	C	Charlie17a	DNA/hAT-Charlie	(32)	185	87	3876789
3060	12.2	5.4	8.8	chr8	60499319	60499918	(84638718)	+	LTR14B	LTR/ERVK	17	594	(14)	3879250
280	30.6	7.5	0.0	chr8	60499901	60499998	(84638638)	+	MLT1H2	LTR/ERVL-MaLR	54	159	(330)	3879252
556	28.4	12.1	2.5	chr8	60500017	60500236	(84638400)	+	MLT1G1	LTR/ERVL-MaLR	231	470	(109)	3879253
410	26.9	0.0	0.9	chr8	60528201	60528305	(84610331)	+	MIRc	SINE/MIR	53	156	(112)	3879318
853	13.6	0.8	2.3	chr8	60528743	60528874	(84609762)	C	AluJr	SINE/Alu	(181)	131	2	3879319
6204	11.3	4.0	0.8	chr8	63145648	63146610	(81992026)	C	HERVH48-int	LTR/ERV1	(5215)	1439	445	3882802
29	0.0	0.0	0.0	chr8	67343821	67343847	(77794789)	+	(GCG)n	Simple_repeat	1	27	(0)	3889097
17	24.9	1.2	6.2	chr8	67343866	67343945	(77794691)	+	(CGCGG)n	Simple_repeat	1	81	(0)	3889098
823	13.8	1.9	8.4	chr8	73117155	73117320	(72021316)	+	MER20	DNA/hAT-Charlie	1	155	(64)	3897463
736	21.2	8.1	0.0	chr8	73126586	73126745	(72011891)	+	MER5A	DNA/hAT-Charlie	1	174	(15)	3897480
1871	22.2	4.4	4.0	chr8	73126746	73127243	(72011393)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	6	3897481
269	33.8	4.4	1.5	chr8	73363168	73363299	(71775337)	C	MIRb	SINE/MIR	(81)	187	52	3897862
3352	11.9	6.8	9.3	chr8	73679916	73679978	(71458658)	+	L1PB1	LINE/L1	358	411	(6452)	3898326
27	0.0	0.0	0.0	chr8	73679979	73680004	(71458632)	+	(T)n	Simple_repeat	1	26	(0)	3898328
3352	11.9	6.8	9.3	chr8	73680005	73680295	(71458341)	+	L1PB1	LINE/L1	412	678	(6185)	3898326
22024	9.2	2.6	0.5	chr8	73680297	73684907	(71453729)	+	L1PB1	LINE/L1	1442	6163	(704)	3898326
4495	16.0	2.9	1.5	chr8	74173855	74174404	(70964232)	C	LTR8B	LTR/ERV1	(16)	804	243	3899313
4137	23.7	9.3	5.8	chr8	74328487	74330893	(70807743)	+	ERV3-16A3_I-int	LTR/ERVL	2727	5221	(5)	3899522
1138	27.5	11.7	0.0	chr8	74581435	74581889	(70556747)	+	LTR33	LTR/ERVL	1	515	(0)	3899847
2263	23.2	3.0	0.6	chr8	75322924	75323562	(69815074)	+	L1MC4a	LINE/L1	7128	7796	(86)	3900804
262	25.8	1.5	0.0	chr8	79612463	79612528	(65526108)	C	MADE2	DNA/TcMar-Mariner	(0)	80	14	3906217
3237	15.8	2.0	7.3	chr8	79786202	79786841	(65351795)	C	MER6A	DNA/TcMar-Tigger	(0)	605	1	3906512
579	26.2	9.0	2.8	chr8	80330308	80330484	(64808152)	C	MIR	SINE/MIR	(71)	191	3	3907540
812	18.1	0.0	0.7	chr8	81589277	81589414	(63549222)	+	AluJo	SINE/Alu	3	139	(173)	3909468
417	33.5	6.4	1.1	chr8	81589551	81589728	(63548908)	C	LTR78B	LTR/ERV1	(834)	462	275	3909469
3602	10.2	1.5	2.0	chr8	82206226	82206776	(62931860)	+	LTR14	LTR/ERVK	1	548	(0)	3910345
386	38.0	2.5	3.5	chr8	82206777	82206918	(62931718)	C	MIRb	SINE/MIR	(97)	171	32	3910344
1411	24.5	6.6	5.6	chr8	82206926	82207374	(62931262)	C	MLT1D	LTR/ERVL-MaLR	(33)	472	19	3910346
14517	15.3	1.5	1.8	chr8	88456209	88459863	(56678773)	+	L1PA12	LINE/L1	1	4479	(3662)	3918649
1849	18.2	6.5	2.0	chr8	92136035	92136478	(53002158)	C	MSTA1	LTR/ERVL-MaLR	(0)	465	1	3923475
925	20.4	1.1	0.0	chr8	92601854	92602029	(52536607)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	3924042
15	13.9	0.0	0.0	chr8	92875189	92875212	(52263424)	+	(CA)n	Simple_repeat	1	24	(0)	3924436
304	32.7	3.2	2.9	chr8	92875240	92875501	(52263135)	+	L1MC4	LINE/L1	4102	4365	(1843)	3924433
953	24.0	9.2	2.5	chr8	93259727	93260162	(51878474)	C	MLT1D	LTR/ERVL-MaLR	(7)	498	1	3924935
1757	13.2	5.3	3.4	chr8	93640733	93641027	(51497609)	+	AluJr	SINE/Alu	1	301	(11)	3925529
2046	15.4	7.6	0.3	chr8	93660983	93661372	(51477264)	+	MSTA	LTR/ERVL-MaLR	8	428	(0)	3925567
12	12.0	3.7	0.0	chr8	94474885	94474911	(50663725)	+	(CCTC)n	Simple_repeat	1	28	(0)	3926895
1408	21.3	8.1	0.9	chr8	95894655	95895093	(49243543)	C	MLT2F	LTR/ERVL	(141)	522	1	3929440
2334	27.7	7.2	5.6	chr8	96735582	96736564	(48402072)	C	ERV3-16A3_I-int	LTR/ERVL	(1347)	3879	2880	3930744
2240	7.5	3.8	0.0	chr8	97821056	97821334	(47317302)	+	AluY	SINE/Alu	1	290	(21)	3932525
2934	11.4	11.0	7.0	chr8	97821343	97821909	(47316727)	C	LTR14B	LTR/ERVK	(0)	608	17	3932526
13	21.3	0.0	0.0	chr8	99012974	99013006	(46125630)	+	(GCCGCA)n	Simple_repeat	1	33	(0)	3934592
2190	11.9	0.3	0.3	chr8	100475237	100475539	(44663097)	C	AluSx1	SINE/Alu	(9)	303	1	3936858
1851	22.8	3.9	3.7	chr8	100475540	100475602	(44663034)	+	MLT1D	LTR/ERVL-MaLR	443	505	(0)	3936857
199	18.8	8.0	6.8	chr8	100475945	100476018	(44662618)	+	MamRTE1	LINE/RTE-BovB	2475	2549	(1263)	3936859
1634	28.6	12.4	10.6	chr8	101098228	101099222	(44039414)	+	L2a	LINE/L2	620	1635	(1784)	3938141
2563	6.6	0.0	2.2	chr8	101473894	101474210	(43664426)	C	AluSx	SINE/Alu	(2)	310	1	3938822
887	14.4	0.8	0.0	chr8	102730951	102731082	(42407554)	C	AluJb	SINE/Alu	(179)	133	1	3940994
1441	25.6	8.6	2.2	chr8	102731086	102731672	(42406964)	+	L2a	LINE/L2	2795	3417	(9)	3940992
484	27.8	11.0	6.9	chr8	108739527	108739814	(36398822)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	246	3949810
2012	8.1	8.5	4.9	chr8	108739815	108740225	(36398411)	C	LTR14B	LTR/ERVK	(2)	606	1	3949811
2238	14.4	0.3	1.0	chr8	117846103	117846407	(27292229)	C	AluSz6	SINE/Alu	(9)	303	1	3962249
620	29.3	3.9	0.0	chr8	118060257	118060454	(27078182)	+	MER102b	DNA/hAT-Charlie	1	206	(135)	3962639
483	30.3	9.2	4.0	chr8	121391450	121391676	(23746960)	+	L4_A_Mam	LINE/RTE-X	4647	4886	(104)	3968169
1074	23.0	13.8	7.0	chr8	121391712	121391985	(23746651)	+	MLT1C	LTR/ERVL-MaLR	1	291	(176)	3968170
5005	5.1	0.2	0.8	chr8	121391986	121392617	(23746019)	+	L1PA8	LINE/L1	5543	6170	(2)	3968171
3854	20.0	5.0	0.8	chr8	123172164	123172678	(21965958)	+	MER45B	DNA/hAT-Tip100	1	548	(492)	3971317
1821	17.6	1.6	1.4	chr8	123193603	123193965	(21944671)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	2	3971363
321	27.1	13.2	1.9	chr8	123193966	123193995	(21944641)	C	L1ME4a	LINE/L1	(169)	5955	5918	3971362
336	21.9	0.0	0.0	chr8	124272140	124272203	(20866433)	C	MER91C	DNA/hAT-Tip100	(76)	64	1	3973421
203	29.1	11.8	2.4	chr8	127760772	127760888	(17377748)	+	L2a	LINE/L2	2974	3093	(282)	3980017
276	29.2	2.2	1.1	chr8	127761007	127761096	(17377540)	+	MER5A	DNA/hAT-Charlie	69	159	(30)	3980018
508	24.7	13.7	5.6	chr8	127761178	127761317	(17377319)	C	MIR	SINE/MIR	(5)	257	100	3980019
327	33.2	5.2	2.7	chr8	129932731	129932990	(15205646)	+	HERVL40-int	LTR/ERVL	17	283	(5247)	3983976
1521	26.6	8.2	4.9	chr8	129933021	129933594	(15205042)	+	HERVL40-int	LTR/ERVL	916	1527	(4003)	3983976
854	28.4	14.2	3.1	chr8	130446551	130447004	(14691632)	+	LTR16E1	LTR/ERVL	16	528	(10)	3985045
741	25.4	0.6	1.1	chr8	130513815	130513993	(14624643)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	3985231
443	30.9	3.6	1.2	chr8	130600826	130600989	(14537647)	C	MIRb	SINE/MIR	(50)	218	51	3985413
548	25.9	17.3	8.3	chr8	131939821	131940241	(13198395)	C	L2a	LINE/L2	(48)	3378	2912	3987663
1109	17.9	2.5	7.8	chr8	132227362	132227616	(12911020)	+	MLT1B	LTR/ERVL-MaLR	150	390	(0)	3988161
246	26.0	4.0	6.8	chr8	132227881	132227983	(12910653)	C	MIRb	SINE/MIR	(81)	187	88	3988162
16583	9.6	1.1	0.2	chr8	133795805	133798920	(11339716)	+	L1PA8A	LINE/L1	2978	6119	(12)	3991216
1035	8.9	6.0	2.5	chr8	133798939	133799112	(11339524)	+	THE1D	LTR/ERVL-MaLR	200	381	(0)	3991215
212	37.2	0.0	0.0	chr8	133799114	133799191	(11339445)	+	L2c	LINE/L2	3266	3343	(44)	3991214
4595	14.1	1.8	0.6	chr8	137012519	137013221	(8125415)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	869	3996541
3088	6.2	7.3	0.0	chr8	137013222	137013641	(8124995)	C	LTR14B	LTR/ERVK	(1)	607	155	3996542
3934	20.6	3.1	3.5	chr8	139574459	139575294	(5563342)	+	MER54A	LTR/ERVL	2	834	(67)	4000553
1828	9.7	1.2	0.4	chr8	140610281	140610518	(4528118)	C	AluSx1	SINE/Alu	(72)	240	1	4002259
232	14.6	0.0	4.0	chr8	140611055	140611104	(4527532)	+	Charlie1	DNA/hAT-Charlie	2	49	(2732)	4002260
1169	28.4	14.4	6.6	chr8	140611118	140611326	(4527310)	+	Charlie1a	DNA/hAT-Charlie	111	329	(1126)	4002261
221	33.2	16.1	3.6	chr8	140787866	140788087	(4350549)	+	L2b	LINE/L2	3110	3364	(11)	4002592
274	29.6	3.0	1.2	chr8	141641253	141641413	(3497223)	C	LTR16D	LTR/ERVL	(9)	642	479	4003923
214	32.9	4.0	2.7	chr8	141641803	141641949	(3496687)	C	L2b	LINE/L2	(170)	3205	3057	4003924
1768	30.4	5.0	5.1	chr8	141887982	141889587	(3249049)	+	L1ME3Cz	LINE/L1	4037	5636	(666)	4004264
769	25.6	1.7	0.4	chr8	141889611	141889838	(3248798)	C	MER20B	DNA/hAT-Charlie	(31)	752	522	4004265
530	28.4	8.9	3.9	chr8	142631863	142632096	(2506540)	C	MLT1F2	LTR/ERVL-MaLR	(20)	540	294	4005122
37	0.0	0.0	0.0	chr8	142632098	142632129	(2506507)	+	(AC)n	Simple_repeat	1	32	(0)	4005123
16	0.0	0.0	0.0	chr8	143431850	143431866	(1706770)	+	(A)n	Simple_repeat	1	17	(0)	4006207
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
2487	25.8	7.6	1.7	chr8	143773977	143775321	(1363315)	+	L1MD2	LINE/L1	4911	6354	(5)	4006652
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
1834	17.6	3.0	0.0	chr8	144643185	144643479	(495157)	+	AluJb	SINE/Alu	6	309	(3)	4007856
2106	11.3	0.3	0.0	chr8	144692749	144693058	(445578)	C	AluSq2	SINE/Alu	(0)	313	1	4007931
2222	11.1	1.7	0.3	chr8	144735104	144735400	(403236)	+	AluSx	SINE/Alu	1	301	(11)	4008009
1936	14.2	4.3	10.4	chr8	144779123	144779595	(359041)	+	LTR14B	LTR/ERVK	166	608	(0)	4008086
839	14.3	5.4	0.7	chr8	144779596	144779736	(358900)	C	AluJb	SINE/Alu	(164)	148	1	4008085
200	24.7	12.9	0.0	chr8	144847841	144847921	(290715)	C	L2c	LINE/L2	(35)	3340	3248	4008196
1678	25.0	6.5	5.1	chr8	144926269	144926934	(211702)	+	L1MC4a	LINE/L1	6153	6828	(1054)	4008322
27602	5.5	0.2	0.1	chr8	145028836	145032160	(106476)	+	HERVK14C-int	LTR/ERVK	4106	7434	(0)	4008437
4562	6.1	4.8	0.0	chr8	145032161	145032719	(105917)	+	LTR14C	LTR/ERVK	1	587	(0)	4008437
589	23.9	9.4	2.4	chr9	905062	905228	(137489489)	C	Zaphod3	DNA/hAT-Tip100	(2443)	180	1	4009983
1980	27.5	1.4	3.0	chr9	2483220	2483863	(135910854)	+	L1MC4	LINE/L1	6462	7095	(947)	4012172
198	18.6	0.0	2.3	chr9	3090167	3090210	(135304507)	C	L2	LINE/L2	(637)	2782	2740	4013133
2129	12.2	0.3	2.8	chr9	3090756	3091075	(135303642)	C	AluSq	SINE/Alu	(0)	313	2	4013134
210	28.1	4.1	0.0	chr9	3527354	3527433	(134867284)	+	MIR3	SINE/MIR	76	155	(53)	4013736
426	21.2	11.3	0.8	chr9	3527462	3527580	(134867137)	C	MIRb	SINE/MIR	(18)	250	118	4013737
2247	17.7	5.6	1.7	chr9	7844832	7845240	(130549477)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	4020315
1910	29.5	1.7	1.0	chr9	12378182	12378767	(126015950)	+	MER90a	LTR/ERV1	1	590	(24)	4026172
1297	29.1	6.5	2.5	chr9	12378796	12379364	(126015353)	C	L1MEf	LINE/L1	(3859)	2782	2169	4026171
2180	17.3	4.9	0.7	chr9	12808859	12809266	(125585451)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	4026760
8120	19.1	7.5	7.3	chr9	12809267	12810528	(125584189)	C	L1MCa	LINE/L1	(5285)	1223	11	4026758
24	12.1	0.0	0.0	chr9	16689108	16689143	(121705574)	+	(AC)n	Simple_repeat	1	36	(0)	4032241
22	0.0	0.0	0.0	chr9	16689164	16689187	(121705530)	+	(A)n	Simple_repeat	1	24	(0)	4032242
3803	7.5	1.0	0.6	chr9	20170214	20170734	(118223983)	C	LTR10G	LTR/ERV1	(0)	523	1	4037491
300	28.7	11.3	4.8	chr9	21774620	21774784	(116619933)	C	L2a	LINE/L2	(0)	3426	3250	4039685
4424	31.3	9.0	7.9	chr9	21774868	21775298	(116619419)	C	L2a	LINE/L2	(368)	3051	2587	4039685
1875	26.5	9.7	8.7	chr9	22230333	22230671	(116164046)	+	L1PA10	LINE/L1	548	903	(5450)	4040295
807	7.8	12.2	0.0	chr9	22230657	22230785	(116163932)	+	L1PA11	LINE/L1	1936	2082	(4271)	4040299
2094	9.1	9.6	4.3	chr9	22230786	22231197	(116163520)	C	LTR14B	LTR/ERVK	(0)	608	1	4040300
21154	11.5	1.7	3.4	chr9	22231202	22235610	(116159107)	+	L1PA11	LINE/L1	2079	6359	(0)	4040299
349	29.3	9.1	1.6	chr9	27526680	27527031	(110867686)	+	L1ME3G	LINE/L1	5286	5587	(537)	4047307
2053	12.5	0.3	1.7	chr9	32557163	32557459	(105837258)	C	AluSz6	SINE/Alu	(10)	302	10	4053846
2351	9.5	1.0	0.0	chr9	32557471	32557776	(105836941)	C	AluSq4	SINE/Alu	(2)	309	1	4053847
12171	8.8	0.5	0.0	chr9	33339528	33341100	(105053617)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4055240
605	23.1	11.0	0.0	chr9	33511237	33511422	(104883295)	C	L1M5	LINE/L1	(1890)	4256	4048	4055590
395	24.4	7.5	2.3	chr9	34404141	34404316	(103990401)	+	L1ME3G	LINE/L1	513	698	(226)	4057376
23	13.6	0.0	5.6	chr9	34596955	34597008	(103797709)	+	G-rich	Low_complexity	1	54	(0)	4057655
326	34.0	3.3	3.3	chr9	34984004	34984155	(103410562)	+	MIRc	SINE/MIR	108	259	(9)	4058202
523	27.3	7.3	6.8	chr9	36892733	36893101	(101501616)	+	L1ME4b	LINE/L1	512	882	(10)	4061650
9938	10.9	3.9	6.6	chr9	37563321	37564947	(100829770)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	4062940
2306	12.1	7.1	0.3	chr9	37564948	37565302	(100829415)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4062940
11	24.4	4.0	1.9	chr9	38069374	38069423	(100325294)	+	(GGCCCGG)n	Simple_repeat	1	52	(0)	4063872
1798	16.2	13.8	2.6	chr9	38182282	38182661	(100212056)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	4	4064098
1536	19.3	1.1	4.6	chr9	38182662	38182996	(100211721)	C	L1MB8	LINE/L1	(40)	6138	5816	4064097
347	20.2	9.9	1.8	chr9	38559845	38559955	(99834762)	C	MSTA	LTR/ERVL-MaLR	(250)	178	58	4064810
13	16.4	0.0	5.3	chr9	38559960	38559997	(99834720)	+	(CCCCCCA)n	Simple_repeat	1	38	(0)	4064811
361	24.7	1.0	0.0	chr9	38560001	38560097	(99834620)	C	MSTA	LTR/ERVL-MaLR	(328)	100	3	4064810
6230	21.6	4.1	1.9	chr9	38560097	38561663	(99833054)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	28	4064810
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
2707	27.2	7.3	5.5	chr9	61855698	61856977	(76537740)	+	SST1	Satellite/centr	263	1561	(2)	4072475
15	5.6	0.0	0.0	chr9	61856982	61857000	(76537717)	+	(TG)n	Simple_repeat	1	19	(0)	4072477
23	25.6	1.7	0.0	chr9	61857000	61857059	(76537658)	+	(TC)n	Simple_repeat	1	61	(0)	4072478
1951	29.4	5.2	6.5	chr9	61857061	61858378	(76536339)	+	SST1	Satellite/centr	262	1562	(1)	4072479
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
966	32.3	8.0	4.6	chr9	69648667	69649429	(68745288)	+	L2	LINE/L2	2213	3003	(416)	4081896
1841	14.7	15.9	0.3	chr9	69685490	69685850	(68708867)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4081954
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
253	26.1	0.0	0.0	chr9	70038639	70038703	(68356014)	+	MER102a	DNA/hAT-Charlie	90	154	(176)	4082516
1730	20.1	1.6	0.6	chr9	70621968	70622328	(67772389)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	4083491
1244	9.5	14.0	1.8	chr9	75163812	75164036	(63230681)	+	LTR14B	LTR/ERVK	17	273	(335)	4090654
1120	12.1	2.5	1.9	chr9	75164100	75164323	(63230394)	+	LTR14B	LTR/ERVK	411	608	(0)	4090655
1586	22.5	10.8	0.4	chr9	77296711	77297249	(61097468)	C	L1MEc	LINE/L1	(2543)	3776	3175	4094095
1304	20.9	3.2	6.4	chr9	77297297	77297654	(61097063)	C	L1MEc	LINE/L1	(6021)	379	34	4094095
949	19.4	4.3	0.5	chr9	79358066	79358267	(59036450)	+	MER6B	DNA/TcMar-Tigger	1	210	(0)	4097127
413	25.0	3.3	3.3	chr9	79761888	79762007	(58632710)	+	L2c	LINE/L2	3268	3387	(0)	4097715
300	29.0	5.8	0.0	chr9	79762102	79762232	(58632485)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	374	4097716
322	32.5	10.9	0.9	chr9	79762464	79762693	(58632024)	+	MLT1J	LTR/ERVL-MaLR	238	493	(19)	4097717
1499	30.5	4.5	2.4	chr9	82525683	82526337	(55868380)	+	HERV16-int	LTR/ERVL	1	669	(4327)	4101584
1839	36.2	1.5	2.6	chr9	82526388	82527268	(55867449)	+	ERVL-E-int	LTR/ERVL	2720	3590	(2077)	4101585
2344	17.8	1.9	1.2	chr9	85070568	85070988	(53323729)	C	MSTB	LTR/ERVL-MaLR	(2)	424	1	4105669
234	33.7	8.4	3.3	chr9	86602587	86602767	(51791950)	+	MIR3	SINE/MIR	12	202	(6)	4108157
516	10.5	4.5	9.5	chr9	86603024	86603139	(51791578)	+	MLT2B4	LTR/ERVL	5	114	(442)	4108158
1793	16.1	4.4	3.3	chr9	87227630	87227963	(51166754)	+	MER44A	DNA/TcMar-Tigger	1	338	(1)	4109134
3082	19.0	1.5	3.9	chr9	88267196	88267694	(50127023)	+	L1MA7	LINE/L1	5809	6291	(0)	4110788
4610	15.0	2.0	3.6	chr9	89516828	89517064	(48877653)	C	L1PA15	LINE/L1	(1)	6164	5935	4112587
40	0.0	0.0	0.0	chr9	89517065	89517101	(48877616)	+	(ATTT)n	Simple_repeat	1	37	(0)	4112588
716	28.9	4.1	4.1	chr9	89757645	89757958	(48636759)	C	MLT1J2	LTR/ERVL-MaLR	(71)	377	64	4112924
30	16.2	0.0	0.0	chr9	90455730	90455785	(47938932)	+	(TATT)n	Simple_repeat	1	56	(0)	4113845
525	33.9	6.1	3.0	chr9	90455960	90456120	(47938597)	C	L2a	LINE/L2	(5)	3421	3256	4113846
327	32.4	11.3	4.6	chr9	90483562	90483902	(47910815)	+	L2a	LINE/L2	1998	2374	(1045)	4113889
344	26.0	10.6	7.1	chr9	90484239	90484420	(47910297)	+	L2a	LINE/L2	3210	3398	(28)	4113889
995	17.5	6.4	0.5	chr9	91913740	91913946	(46480771)	+	L1MB3	LINE/L1	5915	6134	(49)	4115904
2416	22.5	4.0	2.7	chr9	92191613	92191949	(46202768)	C	L1MC3	LINE/L1	(1941)	5844	5499	4116321
10333	9.7	1.8	7.4	chr9	92545064	92546735	(45847982)	+	LTR12C	LTR/ERV1	3	1579	(0)	4116890
212	35.6	3.2	0.0	chr9	93956519	93956608	(44438109)	+	MIRb	SINE/MIR	104	196	(72)	4118818
284	17.2	3.3	0.0	chr9	95729601	95729658	(42665059)	C	MER58A	DNA/hAT-Charlie	(1)	223	164	4121645
2736	14.4	14.4	1.8	chr9	95729664	95730177	(42664540)	+	LTR12	LTR/ERV1	1	590	(236)	4121646
229	18.8	5.5	2.8	chr9	95779008	95779078	(42615639)	C	UCON55	DNA/TcMar-Tigger	(64)	128	56	4121733
507	24.0	19.6	0.8	chr9	97009126	97009389	(41385328)	+	L1M5	LINE/L1	3319	3644	(2502)	4123843
1919	16.3	6.1	8.3	chr9	97009391	97009571	(41385146)	+	MSTB	LTR/ERVL-MaLR	2	164	(262)	4123844
1395	13.1	11.2	0.0	chr9	97009572	97009792	(41384925)	C	AluSz	SINE/Alu	(9)	303	55	4123845
1695	19.3	1.9	0.7	chr9	98685684	98685988	(39708729)	C	AluJr4	SINE/Alu	(3)	309	1	4127004
523	36.4	7.2	4.6	chr9	99608048	99608565	(38786152)	C	L2b	LINE/L2	(0)	3426	2816	4128789
3974	7.2	5.3	0.2	chr9	101123434	101124003	(37270714)	C	LTR14B	LTR/ERVK	(0)	608	8	4131207
5032	7.8	1.1	0.1	chr9	101126585	101127275	(37267442)	C	HERVK14-int	LTR/ERVK	(5398)	698	1	4131207
4229	8.9	3.8	0.2	chr9	101127276	101127858	(37266859)	C	LTR14B	LTR/ERVK	(0)	608	4	4131207
3654	17.3	3.4	6.5	chr9	103131375	103132163	(35262554)	C	MER61-int	LTR/ERV1	(4452)	765	2	4133948
1533	24.3	7.4	0.0	chr9	107275034	107275473	(31119244)	+	L2a	LINE/L2	2578	3052	(367)	4140344
2363	8.2	0.3	0.0	chr9	107490655	107490957	(30903760)	C	AluSz	SINE/Alu	(0)	312	9	4140836
980	27.3	17.4	3.4	chr9	110241654	110242335	(28152382)	+	L2a	LINE/L2	1947	2731	(688)	4145931
2456	8.0	0.0	0.0	chr9	110242336	110242635	(28152082)	+	AluSq2	SINE/Alu	1	300	(13)	4145934
222	23.7	0.0	3.3	chr9	110255316	110255376	(28139341)	C	L2a	LINE/L2	(7)	3419	3361	4145954
35	24.5	3.9	2.2	chr9	112333644	112333773	(26060944)	+	(CGCCCC)n	Simple_repeat	1	135	(0)	4149607
2834	17.6	9.7	3.2	chr9	112594261	112594999	(25799718)	C	L1MB7	LINE/L1	(16)	6168	5377	4150165
955	34.0	4.7	2.7	chr9	113062933	113063595	(25331122)	+	L1MA9	LINE/L1	5622	6298	(14)	4150944
2126	8.2	2.3	3.6	chr9	113339729	113340034	(25054683)	C	AluSx	SINE/Alu	(10)	302	1	4151455
11	24.1	0.0	0.0	chr9	113876980	113877013	(24517704)	+	A-rich	Low_complexity	1	34	(0)	4152559
27	0.0	4.8	4.5	chr9	120203172	120203213	(18191504)	+	(TGTGTGCTG)n	Simple_repeat	1	44	(0)	4164575
399	22.1	2.8	0.9	chr9	121540243	121540347	(16854370)	+	LTR107_Mam	LTR	464	570	(0)	4167207
432	28.7	4.4	0.0	chr9	121540358	121540486	(16854231)	C	L4_A_Mam	LINE/RTE-X	(195)	4795	4661	4167210
1137	15.1	0.5	1.6	chr9	121540697	121540888	(16853829)	+	AluJb	SINE/Alu	107	296	(16)	4167211
30	0.0	0.0	0.0	chr9	123679393	123679420	(14715297)	+	(CTCAGC)n	Simple_repeat	1	28	(0)	4171128
2513	6.6	0.0	0.3	chr9	124815975	124816279	(13578438)	+	AluY	SINE/Alu	1	304	(7)	4173294
414	29.4	6.2	12.2	chr9	124816346	124816679	(13578038)	C	MER113	DNA/hAT-Charlie	(3)	518	208	4173295
1772	16.3	0.7	1.4	chr9	125186464	125186745	(13207972)	+	AluJr	SINE/Alu	1	280	(32)	4174084
274	27.9	12.0	1.2	chr9	125467016	125467178	(12927539)	C	MER5A	DNA/hAT-Charlie	(5)	184	2	4174733
1911	17.2	1.5	8.1	chr9	126798884	126799318	(11595399)	C	MLT1A1	LTR/ERVL-MaLR	(2)	406	1	4177086
437	29.2	9.6	4.0	chr9	126799319	126799440	(11595277)	C	L1M5	LINE/L1	(3512)	2634	2487	4177081
213	18.2	17.8	4.3	chr9	127447080	127447171	(10947546)	C	MER5B	DNA/hAT-Charlie	(0)	178	72	4178228
338	35.7	4.8	0.0	chr9	127529166	127529305	(10865412)	+	MIR	SINE/MIR	23	169	(93)	4178414
2277	10.2	1.3	0.3	chr9	127529358	127529662	(10865055)	+	AluSx1	SINE/Alu	2	309	(3)	4178415
22	10.1	0.0	0.0	chr9	127877388	127877451	(10517266)	+	(AC)n	Simple_repeat	1	64	(0)	4179226
17	10.7	0.0	0.0	chr9	127877746	127877775	(10516942)	+	(AGGG)n	Simple_repeat	1	30	(0)	4179227
347	33.3	6.7	1.6	chr9	127877885	127878067	(10516650)	C	MIRc	SINE/MIR	(12)	256	64	4179228
183	35.1	1.8	4.3	chr9	127897588	127897703	(10497014)	C	MIR3	SINE/MIR	(48)	160	48	4179278
729	22.1	1.7	0.2	chr9	127897919	127898088	(10496629)	+	MIR	SINE/MIR	38	214	(54)	4179279
578	27.3	10.1	0.0	chr9	127921496	127921682	(10473035)	+	MIRb	SINE/MIR	26	233	(35)	4179339
13	25.1	3.9	4.9	chr9	128552302	128552379	(9842338)	+	(CCCTCGC)n	Simple_repeat	1	81	(0)	4180816
13	22.6	0.0	4.4	chr9	129111640	129111684	(9283033)	+	(GGCGG)n	Simple_repeat	1	45	(0)	4182105
11	20.8	0.0	2.9	chr9	129112091	129112125	(9282592)	+	(CCTCCT)n	Simple_repeat	1	35	(0)	4182106
2167	17.6	6.3	5.0	chr9	129259333	129259829	(9134888)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	2	4182438
400	33.3	5.8	3.6	chr9	129260270	129260490	(9134227)	+	L2b	LINE/L2	3130	3355	(20)	4182439
1172	13.7	0.0	0.0	chr9	129292797	129292957	(9101760)	+	AluSx	SINE/Alu	134	294	(18)	4182509
616	16.3	5.4	0.7	chr9	129292958	129293099	(9101618)	C	L1MC4a	LINE/L1	(10)	7872	7724	4182510
1243	26.5	7.9	2.8	chr9	129293101	129293341	(9101376)	C	L1MD2	LINE/L1	(217)	6142	5885	4182511
2119	12.5	0.0	0.6	chr9	129511788	129512100	(8882617)	C	AluSz	SINE/Alu	(0)	312	2	4183009
324	31.7	11.2	3.4	chr9	130086582	130086787	(8307930)	C	MIRb	SINE/MIR	(42)	226	3	4184299
232	21.3	2.6	10.7	chr9	130086999	130087035	(8307682)	+	MIRc	SINE/MIR	74	111	(157)	4184300
2044	16.6	0.0	0.0	chr9	130087036	130087337	(8307380)	C	AluJo	SINE/Alu	(10)	302	1	4184301
1703	19.9	1.8	2.3	chr9	130308742	130309133	(8085584)	+	L1MB3	LINE/L1	5794	6183	(0)	4184758
2293	12.8	0.0	0.3	chr9	130309232	130309544	(8085173)	+	AluSx	SINE/Alu	1	312	(0)	4184759
222	27.3	0.0	0.0	chr9	131678998	131679052	(6715665)	+	L3b	LINE/CR1	4830	4884	(348)	4187470
3622	6.6	1.5	0.4	chr9	133418464	133418920	(4975797)	C	LTR2	LTR/ERV1	(0)	463	2	4190542
359	28.3	0.9	1.7	chr9	134896994	134897108	(3497609)	+	MER5B	DNA/hAT-Charlie	2	115	(63)	4192515
70	21.4	5.8	0.0	chr9	135069437	135069641	(3325076)	+	G-rich	Low_complexity	1	217	(0)	4192725
27	3.5	0.0	0.0	chr9	136012653	136012682	(2382035)	+	(T)n	Simple_repeat	1	30	(0)	4193920
218	34.5	9.8	5.0	chr9	136130730	136130970	(2263747)	+	L2b	LINE/L2	3027	3280	(95)	4194066
27	0.0	6.1	0.0	chr9	136545985	136546017	(1848700)	+	(CGCGCCC)n	Simple_repeat	1	35	(0)	4194481
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
2263	9.3	0.0	0.0	chr9	137467629	137467917	(926800)	+	AluSz6	SINE/Alu	14	302	(10)	4195660
370	30.4	1.9	8.4	chr9	137468222	137468447	(926270)	+	L1MEg	LINE/L1	690	900	(5342)	4195661
48	3.9	0.0	0.0	chr9	137502686	137502738	(891979)	+	(GGGGGACGC)n	Simple_repeat	1	53	(0)	4195703
425	25.0	14.9	3.0	chr9	137502816	137503079	(891638)	+	L1MC5	LINE/L1	8995	9295	(9)	4195704
260	29.6	12.2	2.7	chr9	137750442	137750678	(644039)	+	L1M5	LINE/L1	4402	4648	(1498)	4196108
511	23.6	2.3	0.0	chr9	137750989	137751115	(643602)	+	L1MB7	LINE/L1	6055	6184	(0)	4196115
2240	12.9	0.0	0.0	chrX	13443716	13444017	(142596878)	+	AluJb	SINE/Alu	1	302	(10)	4381183
663	27.5	1.2	0.6	chrX	15731077	15731237	(140309658)	C	MER117	DNA/hAT-Charlie	(30)	167	6	4384859
4358	6.4	4.9	2.7	chrX	15731289	15731882	(140309013)	C	LTR14B	LTR/ERVK	(0)	608	1	4384860
622	18.4	17.1	0.7	chrX	24253647	24253783	(131787112)	+	MER5A1	DNA/hAT-Charlie	2	165	(1)	4399156
244	35.9	11.4	4.8	chrX	24859090	24859668	(131181227)	+	L2c	LINE/L2	2668	3314	(73)	4400244
898	30.9	6.2	6.0	chrX	31685612	31686096	(124354799)	+	LTR16C	LTR/ERVL	1	486	(3)	4410186
4326	10.4	2.8	10.2	chrX	40806725	40807472	(115233423)	C	LTR8	LTR/ERV1	(0)	691	1	4423112
17	12.3	0.0	5.1	chrX	41335055	41335093	(114705802)	+	G-rich	Low_complexity	1	39	(0)	4424167
4164	15.2	2.8	0.3	chrX	41480325	41481017	(114559878)	+	MER50	LTR/ERV1	1	711	(23)	4424505
416	13.8	0.0	0.0	chrX	41481019	41481083	(114559812)	+	Alu	SINE/Alu	234	298	(13)	4424506
472	32.6	7.7	2.7	chrX	41481470	41481765	(114559130)	C	LTR104_Mam	LTR/Gypsy	(274)	1235	924	4424507
5122	16.6	0.7	3.2	chrX	45545949	45546881	(110494014)	+	THE1D-int	LTR/ERVL-MaLR	719	1627	(4)	4430913
3916	17.0	0.9	2.5	chrX	45546870	45547481	(110493414)	C	MSTA-int	LTR/ERVL-MaLR	(908)	743	133	4430912
280	19.4	10.0	0.0	chrX	45783603	45783674	(110257221)	C	MER102c	DNA/hAT-Charlie	(136)	195	116	4431202
257	39.2	1.0	0.0	chrX	45783758	45783854	(110257041)	+	L2b	LINE/L2	3278	3375	(0)	4431203
2125	15.8	1.9	10.9	chrX	46551624	46552186	(109488709)	C	MER4D	LTR/ERV1	(268)	635	1	4432346
227	15.9	2.2	0.0	chrX	46552193	46552236	(109488659)	+	L1MC	LINE/L1	5189	5233	(913)	4432347
17	11.3	5.0	2.4	chrX	46912446	46912485	(109128410)	+	(CCG)n	Simple_repeat	1	42	(0)	4433040
15072	9.9	3.1	2.5	chrX	46942043	46944304	(109096591)	C	L1PA16	LINE/L1	(815)	5331	3041	4433094
488	28.4	18.2	3.0	chrX	47204845	47205181	(108835714)	C	L2a	LINE/L2	(1)	3425	3026	4433600
319	23.4	4.1	2.1	chrX	47205201	47205296	(108835599)	C	L2a	LINE/L2	(540)	2879	2782	4433600
324	27.3	9.5	4.7	chrX	47579313	47579482	(108461413)	+	MIRb	SINE/MIR	9	189	(79)	4434465
8369	21.3	4.3	2.5	chrX	47925143	47926508	(108114387)	C	L1ME1	LINE/L1	(11)	6168	4765	4435027
1818	16.4	0.0	0.0	chrX	49345995	49346281	(106694614)	C	AluSx	SINE/Alu	(25)	287	1	4437942
247	16.4	0.0	8.3	chrX	50075268	50075327	(105965568)	C	MamRep1879	DNA/hAT-Tip100?	(34)	182	128	4438818
26	2.8	5.4	0.0	chrX	50075373	50075409	(105965486)	+	(TGTATATA)n	Simple_repeat	1	39	(0)	4438819
434	26.7	0.0	4.1	chrX	50075460	50075580	(105965315)	C	MamRep1879	DNA/hAT-Tip100?	(86)	130	15	4438818
279	30.5	1.6	10.7	chrX	51811998	51812140	(104228755)	C	L2b	LINE/L2	(121)	3254	3125	4441153
311	0.0	0.0	0.0	chrX	51812141	51812177	(104228718)	+	L1PA4	LINE/L1	6111	6147	(8)	4441156
28	0.0	0.0	0.0	chrX	51812178	51812204	(104228691)	+	(AAAT)n	Simple_repeat	1	27	(0)	4441157
279	32.9	1.3	10.4	chrX	51812205	51812255	(104228640)	C	L2b	LINE/L2	(260)	3127	3078	4441153
2939	15.7	2.2	2.9	chrX	51812415	51812966	(104227929)	C	L1MB7	LINE/L1	(185)	6497	5950	4441158
305	37.9	7.3	1.3	chrX	53281744	53281973	(102758922)	C	MIRb	SINE/MIR	(23)	245	1	4443385
330	27.6	11.0	0.0	chrX	53282261	53282365	(102758530)	C	MIR3	SINE/MIR	(62)	146	29	4443386
2186	13.4	0.3	2.3	chrX	54932305	54932609	(101108286)	+	AluJr	SINE/Alu	1	299	(13)	4446535
448	30.5	10.0	3.6	chrX	54932649	54932927	(101107968)	C	L2	LINE/L2	(2395)	1024	726	4446536
8317	20.1	6.5	1.9	chrX	55324111	55327746	(100713149)	C	L1MD1	LINE/L1	(2623)	3914	8	4447019
14	17.3	5.1	0.0	chrX	56794390	56794428	(99246467)	+	(AACAA)n	Simple_repeat	1	41	(0)	4448544
13	11.1	3.2	3.1	chrX	69107348	69107378	(86933517)	+	(CCT)n	Simple_repeat	1	32	(0)	4457563
17	16.3	0.0	9.8	chrX	69107686	69107746	(86933149)	+	(CCCTC)n	Simple_repeat	1	61	(0)	4457564
576	27.1	1.4	0.0	chrX	69322604	69322747	(86718148)	+	MIR	SINE/MIR	39	184	(78)	4458036
4185	25.0	1.9	2.4	chrX	69669905	69671599	(86369296)	C	L1MA9	LINE/L1	(4161)	3405	1774	4458557
993	22.1	0.0	3.2	chrX	69671613	69671864	(86369031)	C	L1MA9	LINE/L1	(6923)	643	400	4458557
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
2934	9.4	1.4	0.5	chrX	74179751	74180188	(81860707)	+	HERVK3-int	LTR/ERVK	2414	2855	(4347)	4465236
1389	7.9	0.0	0.0	chrX	74180192	74180380	(81860515)	+	HERVK3-int	LTR/ERVK	4078	4266	(2936)	4465236
4156	11.5	0.8	0.1	chrX	74180380	74181040	(81859855)	+	HERVK3-int	LTR/ERVK	4644	5308	(1894)	4465236
23618	12.7	3.1	2.6	chrX	75964498	75968551	(80072344)	C	HERVH48-int	LTR/ERV1	(1395)	5259	1186	4467137
5147	14.1	1.8	0.2	chrX	75968542	75969401	(80071494)	C	HERVH48-int	LTR/ERV1	(5780)	874	1	4467137
1399	18.7	3.4	10.4	chrX	83065638	83066020	(72974875)	C	MLT2B3	LTR/ERVL	(195)	359	5	4474493
2822	3.8	0.0	1.4	chrX	83066021	83066369	(72974526)	C	LTR14A	LTR/ERVK	(0)	344	1	4474494
1757	11.9	0.7	11.6	chrX	84309206	84309532	(71731363)	+	AluSx1	SINE/Alu	5	295	(17)	4475809
19098	12.7	3.1	1.3	chrX	84309534	84316657	(71724238)	+	L1MA1	LINE/L1	508	7721	(0)	4475810
2238	15.5	7.6	0.5	chrX	85215949	85216349	(70824546)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	4476788
1819	20.6	2.7	5.3	chrX	85216350	85216676	(70824219)	C	MLT1E1A	LTR/ERVL-MaLR	(85)	595	279	4476787
9834	6.8	11.8	0.0	chrX	88745500	88746890	(67294005)	C	LTR12C	LTR/ERV1	(0)	1579	3	4480626
2650	7.8	0.0	0.0	chrX	93965801	93966144	(62074751)	+	LTR14A	LTR/ERVK	1	344	(0)	4486294
3033	24.1	3.8	5.0	chrX	93966145	93966765	(62074130)	C	L1PA17	LINE/L1	(6147)	706	78	4486286
1082	8.0	0.0	0.0	chrX	101183121	101183245	(54857650)	C	AluSx3	SINE/Alu	(11)	300	176	4495569
3025	4.4	0.3	0.0	chrX	101183246	101183588	(54857307)	C	LTR14A	LTR/ERVK	(0)	344	1	4495570
46543	4.7	0.7	0.2	chrX	101184005	101189531	(54851364)	C	HERVK14-int	LTR/ERVK	(544)	5552	1	4495572
2910	5.3	1.2	0.0	chrX	101189532	101189871	(54851024)	C	LTR14A	LTR/ERVK	(0)	344	1	4495572
1263	8.6	0.0	8.6	chrX	101189873	101190047	(54850848)	C	AluSg	SINE/Alu	(128)	182	23	4495574
17	15.9	0.0	0.0	chrX	101190058	101190092	(54850803)	+	(ATTTT)n	Simple_repeat	1	35	(0)	4495575
1955	15.4	4.1	1.7	chrX	101190100	101190455	(54850440)	C	L1MA6	LINE/L1	(0)	6300	5936	4495576
1037	23.1	4.4	9.8	chrX	104045867	104046254	(51994641)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	23	4499479
2098	12.4	0.0	0.7	chrX	104046258	104046565	(51994330)	+	MER1A	DNA/hAT-Charlie	224	529	(0)	4499481
2184	15.2	10.9	0.7	chrX	104851676	104852085	(51188810)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	4500775
2559	14.3	1.8	0.9	chrX	104852126	104852562	(51188333)	C	MER65A	LTR/ERV1	(4)	441	1	4500776
346	34.0	14.2	1.9	chrX	112688053	112688316	(43352579)	C	L2	LINE/L2	(954)	2465	2164	4511752
381	28.4	2.2	0.0	chrX	114362743	114362830	(41678065)	C	L2b	LINE/L2	(4)	3371	3282	4513981
457	35.5	8.4	2.3	chrX	114362970	114363574	(41677321)	C	L2b	LINE/L2	(456)	2963	2319	4513981
1177	6.4	3.7	0.6	chrX	114391694	114391851	(41649044)	+	L1PA4	LINE/L1	5977	6139	(16)	4514022
2135	13.0	0.3	0.7	chrX	115546916	115547214	(40493681)	+	AluSz6	SINE/Alu	1	298	(14)	4515721
60	24.8	1.1	3.3	chrX	115547215	115547394	(40493501)	+	GA-rich	Low_complexity	1	182	(0)	4515722
1736	15.3	0.4	0.8	chrX	115547396	115547663	(40493232)	C	AluJr4	SINE/Alu	(35)	277	11	4515723
5065	20.7	8.9	4.0	chrX	118292528	118293073	(37747822)	+	L1MDa	LINE/L1	1181	1801	(4832)	4518918
2919	4.2	2.9	0.0	chrX	118293074	118293407	(37747488)	C	LTR14A	LTR/ERVK	(0)	344	1	4518920
835	6.5	10.2	4.7	chrX	118293411	118293539	(37747356)	C	HERVK14-int	LTR/ERVK	(0)	6096	5960	4518920
369	18.0	0.0	1.6	chrX	118293540	118293601	(37747294)	C	MER41C	LTR/ERV1	(460)	61	1	4518921
46141	5.1	0.8	0.3	chrX	118294872	118300392	(37740503)	C	HERVK14-int	LTR/ERVK	(544)	5552	1	4518920
3090	4.1	0.0	0.0	chrX	118300393	118300736	(37740159)	C	LTR14A	LTR/ERVK	(0)	344	1	4518920
2700	5.4	2.3	0.0	chrX	119033940	119034275	(37006620)	+	LTR14A	LTR/ERVK	1	344	(0)	4520344
2022	14.3	0.7	5.0	chrX	119704710	119705031	(36335864)	+	AluJr	SINE/Alu	5	312	(0)	4521619
2353	29.7	9.1	5.8	chrX	119705032	119705911	(36334984)	C	L2c	LINE/L2	(410)	3009	2077	4521618
368	28.6	0.0	0.0	chrX	120479311	120479401	(35561494)	C	MER5B	DNA/hAT-Charlie	(87)	91	1	4523005
403	26.5	8.1	5.0	chrX	120479434	120479612	(35561283)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	4523006
4459	26.2	9.6	6.1	chrX	123502503	123504514	(32536381)	+	ERV3-16A3_I-int	LTR/ERVL	95	2333	(3321)	4526854
2223	6.7	0.0	2.8	chrX	123846210	123846524	(32194371)	+	AluYj4	SINE/Alu	5	311	(0)	4527499
2750	14.9	11.9	9.4	chrX	123846525	123846912	(32193983)	+	LTR8B	LTR/ERV1	210	654	(166)	4527500
767	12.2	19.6	0.0	chrX	123846913	123847043	(32193852)	+	AluSx3	SINE/Alu	136	298	(13)	4527501
1979	19.0	7.3	0.2	chrX	125950117	125950512	(30090383)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	4530619
18	5.1	1.9	11.3	chrX	129742363	129742414	(26298481)	+	(CCCT)n	Simple_repeat	1	53	(0)	4535215
20	24.5	1.6	1.5	chrX	129742415	129742425	(26298470)	+	(CCCCT)n	Simple_repeat	2	65	(0)	4535216
260	30.3	11.1	0.7	chrX	130120375	130120527	(25920368)	+	MamSINE1	SINE/tRNA-RTE	98	268	(22)	4535992
312	26.2	1.8	4.5	chrX	131300398	131300509	(24740386)	+	UCON105	Unknown	107	215	(58)	4537869
232	19.6	0.0	2.1	chrX	131300625	131300671	(24740224)	+	UCON105	Unknown	222	267	(6)	4537869
260	28.5	17.0	4.2	chrX	132223639	132223870	(23817025)	C	L2a	LINE/L2	(0)	3426	3093	4539087
568	28.6	10.1	1.7	chrX	132223969	132224200	(23816695)	+	MIR	SINE/MIR	17	261	(1)	4539088
881	17.0	1.4	6.4	chrX	133106583	133106802	(22934093)	+	L1MEf	LINE/L1	3578	3786	(2360)	4540339
934	16.9	1.3	1.9	chrX	133106820	133106979	(22933916)	+	AluJr	SINE/Alu	16	174	(138)	4540347
695	8.0	0.0	2.0	chrX	133106980	133107081	(22933814)	C	MSTB	LTR/ERVL-MaLR	(326)	100	1	4540348
673	30.5	1.8	1.8	chrX	133107116	133107342	(22933553)	+	ERVL-E-int	LTR/ERVL	3407	3633	(2034)	4540349
2225	11.6	0.0	0.0	chrX	133976648	133976923	(22063972)	+	AluSx1	SINE/Alu	13	288	(24)	4541893
43	0.0	0.0	0.0	chrX	133976928	133976966	(22063929)	+	(AATA)n	Simple_repeat	1	39	(0)	4541894
2337	11.6	2.5	0.3	chrX	134280647	134281000	(21759895)	+	THE1C-int	LTR/ERVL-MaLR	1270	1631	(0)	4542385
2272	13.4	0.5	4.6	chrX	134281001	134281391	(21759504)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4542385
232	28.1	0.0	0.0	chrX	134604500	134604563	(21436332)	C	Helitron2Na_Mam	RC?/Helitron?	(74)	250	187	4543032
269	29.3	10.8	3.3	chrX	134991415	134991678	(21049217)	+	HAL1	LINE/L1	745	1078	(1387)	4543791
18	21.6	2.1	0.0	chrX	135022461	135022508	(21018387)	+	(GCGCT)n	Simple_repeat	1	49	(0)	4543827
194	26.1	14.2	5.0	chrX	136209697	136209817	(19831078)	+	MIRb	SINE/MIR	11	144	(124)	4545590
21	9.5	0.0	0.0	chrX	136209830	136209863	(19831032)	+	(TTTCT)n	Simple_repeat	1	34	(0)	4545591
291	31.4	0.7	1.9	chrX	136884928	136885083	(19155812)	C	L2	LINE/L2	(575)	2844	2691	4546782
15	15.3	0.0	5.0	chrX	139205571	139205610	(16835285)	+	(CCACCC)n	Simple_repeat	1	40	(0)	4550363
103	28.0	3.4	0.6	chrX	139205825	139206144	(16834751)	+	GA-rich	Low_complexity	1	331	(0)	4550364
2797	11.9	3.0	0.9	chrX	141002791	141003240	(15037655)	C	LTR46	LTR/ERV1	(0)	460	1	4553136
2234	15.3	0.8	1.6	chrX	143468031	143468408	(12572487)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4556603
10322	12.6	2.8	0.5	chrX	143468414	143469951	(12570944)	C	THE1C-int	LTR/ERVL-MaLR	(5)	1575	1	4556603
273	31.9	11.4	4.7	chrX	150650896	150651066	(5389829)	+	L2c	LINE/L2	2977	3160	(227)	4566237
826	21.8	1.4	5.0	chrX	150845233	150845454	(5195441)	+	L1MB5	LINE/L1	5961	6174	(0)	4566550
45	2.4	0.0	0.0	chrX	151079956	151079998	(4960897)	+	(GT)n	Simple_repeat	1	43	(0)	4567085
27	5.2	0.0	4.5	chrX	151385933	151385976	(4654919)	+	(TCCT)n	Simple_repeat	1	44	(0)	4567546
214	34.3	9.7	2.3	chrX	151386304	151386488	(4654407)	C	L2b	LINE/L2	(182)	3193	2998	4567547
637	27.0	6.5	0.0	chrX	151585214	151585387	(4455508)	+	MIR	SINE/MIR	39	224	(38)	4567847
250	29.9	12.4	1.7	chrX	151585409	151585588	(4455307)	C	L2a	LINE/L2	(558)	2861	2660	4567846
243	14.3	5.4	5.4	chrX	153046700	153046773	(2994122)	C	HAL1ME	LINE/L1	(1222)	1243	1170	4569775
687	28.9	2.1	2.1	chrX	153471168	153471361	(2569534)	+	MIR	SINE/MIR	68	261	(1)	4570314
988	23.3	3.5	9.3	chrX	153742462	153742826	(2298069)	C	MLT1B	LTR/ERVL-MaLR	(41)	349	7	4570677
73	1.4	0.0	2.6	chrX	153859457	153859534	(2181361)	+	(AAGG)n	Simple_repeat	1	78	(0)	4570850
360	25.2	8.3	0.9	chrX	153859600	153859711	(2181184)	C	MLT1C	LTR/ERVL-MaLR	(391)	121	1	4570842
544	27.6	19.4	2.4	chrX	153859725	153860218	(2180677)	C	L2	LINE/L2	(1505)	1914	1317	4570851
1435	14.9	0.0	1.4	chrX	153860229	153860450	(2180445)	+	AluJr4	SINE/Alu	1	219	(93)	4570852
2443	11.7	1.3	0.8	chrX	154914930	154915307	(1125588)	C	THE1D	LTR/ERVL-MaLR	(0)	381	2	4572608
10234	14.2	3.8	1.1	chrX	154915309	154917303	(1123592)	C	L1MA4	LINE/L1	(1475)	6087	4039	4572605
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
75	7.6	0.0	0.0	chrY	10687986	10688083	(46539332)	+	(ATTCC)n	Simple_repeat	1	98	(0)	4588000
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
314	22.4	2.9	0.0	chrY	10950282	10950348	(46277067)	C	AluYj4	SINE/Alu	(18)	293	225	4588504
235	26.3	10.9	0.0	chrY	10950303	10950359	(46277056)	+	SVA_A	Retroposon/SVA	332	395	(992)	4588505
4917	25.0	0.5	0.3	chrY	10950360	10951162	(46276253)	+	(TCCAC)n	Simple_repeat	1	804	(0)	4588506
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
338	21.0	6.9	0.0	chrY	11281975	11282055	(45945360)	C	MER21C	LTR/ERVL	(822)	116	30	4589057
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
10957	28.1	0.5	0.1	chrY	26643208	26653351	(30574064)	+	(AATGG)n	Simple_repeat	1	10181	(0)	4607159
10957	28.2	0.5	0.1	chrY	26653859	26659290	(30568125)	+	(AATGG)n	Simple_repeat	5	5454	(0)	4607165