30	0.0	10.9	0.0	chr1	791053	791098	(248165324)	+	(GGAATG)n	Simple_repeat	1	51	(0)	1026
1159	22.5	6.1	7.5	chr1	1106022	1106603	(247849819)	+	L1ME2	LINE/L1	5535	5898	(458)	1367
9434	10.3	11.6	2.6	chr1	1106614	1108045	(247848377)	+	LTR12C	LTR/ERV1	2	1579	(0)	1368
14	15.6	6.7	2.1	chr1	1778558	1778602	(247177820)	+	G-rich	Low_complexity	1	48	(0)	2331
33	21.2	2.9	6.4	chr1	1909165	1909300	(247047122)	+	G-rich	Low_complexity	1	140	(0)	2604
32	0.0	0.0	0.0	chr1	2199392	2199421	(246757001)	+	(CCCAG)n	Simple_repeat	1	30	(0)	2989
8424	12.3	13.8	2.0	chr1	2813099	2814487	(246141935)	+	LTR12C	LTR/ERV1	2	1579	(0)	3473
14	19.0	4.8	0.0	chr1	3491331	3491372	(245465050)	+	(GCACCCG)n	Simple_repeat	1	44	(0)	4058
1312	26.5	5.5	4.2	chr1	3931848	3932322	(245024100)	+	LTR40A1	LTR/ERVL	1	552	(32)	4581
422	36.0	2.5	4.0	chr1	3932325	3932573	(245023849)	+	HERVL40-int	LTR/ERVL	46	290	(5240)	4582
760	28.4	17.8	4.0	chr1	3968661	3969080	(244987342)	C	LTR16E2	LTR/ERVL	(25)	543	33	4646
18	14.4	7.5	0.0	chr1	6041776	6041815	(242914607)	+	(CT)n	Simple_repeat	1	43	(0)	7605
11	36.5	0.0	0.0	chr1	6471686	6471744	(242484678)	+	(CCCCGC)n	Simple_repeat	1	59	(0)	8282
6639	25.1	0.4	1.8	chr1	6561730	6561831	(242394591)	C	HERVFH21-int	LTR/ERV1	(551)	7885	7790	8471
2472	11.3	25.7	0.4	chr1	6561832	6562169	(242394253)	C	LTR14B	LTR/ERVK	(1)	607	115	8474
2701	18.6	6.4	9.9	chr1	7200037	7200870	(241755552)	C	L1MC4	LINE/L1	(0)	8042	7241	9532
13998	18.0	4.3	3.3	chr1	7200876	7203817	(241752605)	C	L1MB7	LINE/L1	(1)	6183	3184	9533
2398	9.5	0.3	0.0	chr1	9010346	9010651	(239945771)	C	AluSq	SINE/Alu	(0)	313	7	12745
2584	12.1	3.5	0.5	chr1	9087530	9087918	(239868504)	+	HERVFH19-int	LTR/ERV1	1	401	(7318)	12923
2341	11.0	0.0	0.7	chr1	9189071	9189379	(239767043)	+	AluSz	SINE/Alu	1	307	(5)	13121
2177	14.7	0.0	0.0	chr1	9764359	9764664	(239191758)	+	AluSz	SINE/Alu	5	310	(2)	14322
2258	14.2	2.5	10.2	chr1	9764665	9764709	(239191713)	C	MSTB1	LTR/ERVL-MaLR	(393)	39	1	14320
12	13.3	9.3	2.1	chr1	10033001	10033043	(238923379)	+	G-rich	Low_complexity	1	47	(0)	14941
2251	15.2	0.6	0.0	chr1	10224841	10225176	(238731246)	C	MER1B	DNA/hAT-Charlie	(0)	339	2	15375
1117	18.2	10.0	3.6	chr1	10225204	10225483	(238730939)	+	AluJb	SINE/Alu	1	300	(12)	15376
8848	6.3	19.6	0.1	chr1	10425656	10426924	(238529498)	C	LTR12C	LTR/ERV1	(0)	1579	2	15771
15	20.4	0.0	2.4	chr1	10475135	10475175	(238481247)	+	(GCCCC)n	Simple_repeat	1	41	(0)	15885
353	35.0	11.0	1.5	chr1	10928567	10928763	(238027659)	C	MLT1N2	LTR/ERVL-MaLR	(78)	484	267	16637
726	27.6	0.0	1.7	chr1	10928820	10928996	(238027426)	C	MLT1N2	LTR/ERVL-MaLR	(388)	174	1	16637
1574	23.1	2.5	1.1	chr1	12077260	12077613	(236878809)	+	MLT1E2	LTR/ERVL-MaLR	107	465	(162)	19103
261	28.0	9.8	2.5	chr1	12077617	12077814	(236878608)	C	L2b	LINE/L2	(202)	3173	2960	19104
1846	18.9	18.1	3.0	chr1	12249761	12250225	(236706197)	C	MER21C	LTR/ERVL	(10)	928	393	19491
2287	17.6	2.8	1.0	chr1	12684768	12685185	(236271237)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	20241
371	27.6	11.7	1.8	chr1	13466689	13466930	(235489492)	C	L2a	LINE/L2	(188)	3187	2921	21447
2803	4.7	0.0	0.6	chr1	13659235	13659577	(235296845)	+	LTR14A	LTR/ERVK	4	344	(0)	21829
11602	10.7	1.2	0.1	chr1	13855068	13856679	(235099743)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	22143
2589	12.0	1.9	9.0	chr1	14530421	14530802	(234425620)	+	MSTB	LTR/ERVL-MaLR	2	383	(43)	23354
313	26.5	10.4	8.1	chr1	14702256	14702326	(234254096)	+	Charlie4z	DNA/hAT-Charlie	1	88	(79)	23684
206	17.6	2.9	0.0	chr1	14806804	14806837	(234149585)	C	MIR	SINE/MIR	(189)	73	39	23894
622	27.4	13.6	8.0	chr1	14806882	14807432	(234148990)	+	LTR67B	LTR/ERVL	25	611	(9)	23895
1000	25.3	18.5	1.3	chr1	15196902	15197374	(233759048)	C	MLT1K	LTR/ERVL-MaLR	(10)	585	13	24759
1781	12.8	0.3	1.7	chr1	15459163	15459450	(233496972)	C	AluJo	SINE/Alu	(15)	297	14	25302
309	26.4	2.1	0.0	chr1	15459464	15459554	(233496868)	C	MamRep564	Unknown	(200)	157	65	25303
24	22.9	0.0	0.0	chr1	16188005	16188060	(232768362)	+	(ATG)n	Simple_repeat	1	56	(0)	26889
264	9.1	0.0	0.0	chr1	16506444	16506476	(232449946)	C	U1	snRNA	(0)	165	133	27657
1606	22.1	11.8	6.0	chr1	16506477	16507011	(232449411)	C	LTR4	LTR/ERV1	(0)	596	27	27658
1535	0.0	0.0	0.0	chr1	16514122	16514285	(232442137)	C	U1	snRNA	(1)	164	1	27677
544	29.8	4.8	1.7	chr1	16605694	16605874	(232350548)	+	MLT1F-int	LTR/ERVL-MaLR	1077	1263	(226)	27805
552	17.0	3.6	0.0	chr1	16605875	16605980	(232350442)	+	L1MC2	LINE/L1	5461	5570	(2215)	27806
1541	0.0	0.0	0.0	chr1	16666785	16666948	(232289474)	C	U1	snRNA	(1)	164	1	27917
597	5.4	0.0	0.0	chr1	16727285	16727358	(232229064)	+	tRNA-Gly-GGG	tRNA	1	74	(0)	28015
1544	0.0	0.0	0.0	chr1	16740516	16740679	(232215743)	+	U1	snRNA	1	164	(1)	28035
644	1.4	0.0	0.0	chr1	16861921	16861991	(232094431)	+	tRNA-Gly-GGG	tRNA	1	71	(3)	28145
1541	0.0	0.0	0.0	chr1	16895980	16896143	(232060279)	+	U1	snRNA	1	164	(1)	28204
1328	19.8	6.2	5.9	chr1	16905464	16905857	(232050565)	+	LTR4	LTR/ERV1	200	596	(0)	28228
424	26.2	6.4	3.7	chr1	17012090	17012262	(231944160)	+	MIRb	SINE/MIR	25	207	(61)	28482
1300	9.5	0.6	0.0	chr1	17012264	17012431	(231943991)	+	AluSp	SINE/Alu	136	304	(9)	28483
2779	4.4	0.0	6.3	chr1	17301715	17302081	(231654341)	+	LTR14A	LTR/ERVK	1	344	(0)	29119
1725	13.8	2.0	1.7	chr1	17302088	17302381	(231654041)	+	MSTA	LTR/ERVL-MaLR	134	428	(0)	29120
199	29.4	1.4	6.8	chr1	17494292	17494364	(231462058)	+	L2a	LINE/L2	3298	3366	(21)	29546
288	27.6	10.0	1.1	chr1	17494547	17494713	(231461709)	+	MIRb	SINE/MIR	31	223	(45)	29548
434	29.2	2.0	0.2	chr1	17569030	17569163	(231387259)	+	MIRc	SINE/MIR	37	174	(88)	29760
204	34.7	3.1	0.0	chr1	18146344	18146438	(230809984)	+	MIR1_Amn	SINE/MIR	22	119	(111)	31027
3306	12.0	2.2	0.2	chr1	18189362	18189852	(230766570)	C	MER1A	DNA/hAT-Charlie	(0)	529	29	31125
3800	10.7	2.7	0.8	chr1	18827547	18828063	(230128359)	+	MER1A	DNA/hAT-Charlie	1	527	(2)	32507
1268	22.6	9.6	4.2	chr1	19035153	19035586	(229920836)	+	MLT1C	LTR/ERVL-MaLR	2	461	(6)	32973
672	22.8	6.9	0.0	chr1	19035591	19035752	(229920670)	+	MER45A	DNA/hAT-Tip100	5	178	(0)	32974
11	3.8	6.5	6.1	chr1	19311939	19311969	(229644453)	+	(GGCGC)n	Simple_repeat	1	33	(0)	33409
38123	6.3	0.2	0.5	chr1	19542502	19547188	(229409234)	+	HERVK9-int	LTR/ERVK	1349	6021	(0)	33889
3457	18.5	1.4	7.6	chr1	19828088	19828645	(229127777)	C	L1MB4	LINE/L1	(39)	6141	5605	34588
4136	7.4	0.6	2.0	chr1	19926887	19927423	(229028999)	C	LTR14	LTR/ERVK	(19)	529	1	34784
11969	24.9	3.4	1.8	chr1	19927433	19930516	(229025906)	C	HERVK14C-int	LTR/ERVK	(25)	7409	4275	34784
968	32.2	4.7	4.5	chr1	20236301	20236808	(228719614)	+	MLT1K	LTR/ERVL-MaLR	1	509	(86)	35336
292	35.3	5.7	1.5	chr1	20324137	20324271	(228632151)	C	L2b	LINE/L2	(20)	3355	3215	35524
473	24.2	10.5	1.4	chr1	20404260	20404409	(228552013)	C	L2a	LINE/L2	(0)	3426	3204	35705
1316	25.2	7.8	6.5	chr1	20561640	20562106	(228394316)	+	MLT1K	LTR/ERVL-MaLR	48	533	(62)	36051
21	21.1	0.0	3.5	chr1	20633486	20633543	(228322879)	+	(CGG)n	Simple_repeat	1	58	(0)	36239
3907	11.0	0.4	1.3	chr1	20667069	20667602	(228288820)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	36295
422	32.0	7.0	3.9	chr1	20733138	20733345	(228223077)	+	MIRb	SINE/MIR	46	260	(8)	36439
410	26.9	10.2	0.7	chr1	21195039	21195188	(227761234)	C	MIRc	SINE/MIR	(100)	168	3	37357
430	26.1	6.8	3.0	chr1	21288754	21288963	(227667459)	+	MIRb	SINE/MIR	16	221	(41)	37579
568	23.1	2.2	0.7	chr1	21354974	21355108	(227601314)	C	MIRb	SINE/MIR	(111)	157	21	37743
245	22.9	0.0	12.5	chr1	21355205	21355246	(227601176)	+	MIR3	SINE/MIR	85	124	(84)	37744
1820	15.6	2.1	1.0	chr1	21355247	21355564	(227600858)	C	AluJb	SINE/Alu	(0)	312	6	37745
2414	9.0	0.0	0.0	chr1	22256561	22256860	(226699562)	+	AluSc8	SINE/Alu	1	300	(11)	39751
478	28.4	3.4	2.4	chr1	22717809	22718049	(226238373)	+	MIR	SINE/MIR	21	261	(1)	40761
2136	20.0	14.3	1.6	chr1	22787757	22788201	(226168221)	C	MLT1F2	LTR/ERVL-MaLR	(63)	497	1	40937
318	28.0	0.0	3.6	chr1	23014196	23014306	(225942116)	C	MIRb	SINE/MIR	(0)	268	162	41457
1127	30.2	12.5	2.3	chr1	23476378	23476835	(225479587)	+	L2b	LINE/L2	2555	3075	(344)	42509
204	22.2	3.6	0.0	chr1	24090601	24090654	(224865768)	+	L2c	LINE/L2	3270	3325	(62)	44107
290	20.0	1.6	0.0	chr1	24489783	24489833	(224466589)	+	LTR50	LTR/ERVL	552	603	(192)	45000
5952	16.1	13.9	0.7	chr1	24489834	24491064	(224465358)	+	LTR12E	LTR/ERV1	1	1317	(5)	45011
1927	12.4	1.4	3.1	chr1	24565616	24565810	(224390612)	C	AluJb	SINE/Alu	(27)	285	95	45177
2226	14.3	1.1	1.6	chr1	24565811	24566186	(224390236)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	45178
2512	7.1	0.0	0.0	chr1	24685157	24685452	(224270970)	+	AluSx3	SINE/Alu	1	296	(15)	45455
1875	14.5	2.3	1.0	chr1	24813721	24814016	(224142406)	C	AluJb	SINE/Alu	(12)	300	1	45804
8443	9.4	3.0	3.2	chr1	24891494	24892825	(224063597)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	252	45953
1821	13.6	7.6	0.0	chr1	25828301	25828579	(223127843)	+	AluSx	SINE/Alu	1	302	(10)	47907
562	33.9	9.5	4.2	chr1	25958150	25958577	(222997845)	+	Tigger15a	DNA/TcMar-Tigger	9	461	(254)	48214
2394	7.1	0.0	0.0	chr1	26272618	26272928	(222683494)	C	AluSq2	SINE/Alu	(0)	313	1	48966
354	34.8	5.1	3.4	chr1	26273002	26273269	(222683153)	C	L2c	LINE/L2	(665)	2754	2482	48965
234	35.3	9.9	3.8	chr1	26321367	26321631	(222634791)	+	L2c	LINE/L2	3063	3345	(42)	49060
239	29.7	12.8	0.3	chr1	26922336	26922456	(222033966)	+	MIRc	SINE/MIR	13	149	(81)	50463
441	18.6	1.1	1.1	chr1	27489639	27489725	(221466697)	C	MIR3	SINE/MIR	(61)	147	61	51853
13	21.7	0.0	2.6	chr1	27551917	27551955	(221404467)	+	(GGCGTG)n	Simple_repeat	1	39	(0)	52015
14	22.2	5.8	0.0	chr1	27672284	27672335	(221284087)	+	(TCTGCAC)n	Simple_repeat	1	55	(0)	52273
294	25.4	0.0	0.0	chr1	28286931	28286985	(220669437)	C	Charlie15b	DNA/hAT-Charlie	(1005)	56	2	53761
1134	25.4	12.0	5.2	chr1	28287000	28287385	(220669037)	+	LTR16	LTR/ERVL	1	416	(22)	53762
640	29.8	3.2	3.2	chr1	28806092	28806162	(220150260)	C	L2	LINE/L2	(648)	2771	2701	55188
3654	9.9	0.4	5.2	chr1	29156731	29157306	(219799116)	C	LTR14	LTR/ERVK	(0)	548	1	56047
302	27.6	7.9	0.9	chr1	29191003	29191108	(219765314)	+	L2c	LINE/L2	3027	3140	(247)	56105
1242	11.1	0.0	0.0	chr1	29191311	29191472	(219764950)	C	AluSc8	SINE/Alu	(19)	292	131	56120
542	30.6	5.7	10.0	chr1	29707856	29708334	(219248088)	+	L2b	LINE/L2	2919	3375	(0)	57130
192	30.8	4.5	3.6	chr1	30034933	30035043	(218921379)	C	MIRb	SINE/MIR	(71)	197	86	57718
502	28.7	1.7	6.0	chr1	30035153	30035337	(218921085)	C	MIRc	SINE/MIR	(40)	228	52	57719
1221	23.8	2.0	1.0	chr1	30088801	30089102	(218867320)	C	ORSL-2a	DNA/hAT-Tip100	(10)	332	28	57823
20	3.7	0.0	0.0	chr1	30157204	30157231	(218799191)	+	(AAAC)n	Simple_repeat	1	28	(0)	57945
4113	18.3	1.3	5.0	chr1	30206636	30207933	(218748489)	+	HERVH-int	LTR/ERV1	3357	4719	(1935)	58024
1684	13.0	0.0	0.0	chr1	30207924	30208184	(218748238)	+	HERVH-int	LTR/ERV1	5756	6016	(1697)	58024
366	30.8	3.6	3.2	chr1	30480604	30480824	(218475598)	+	MIRb	SINE/MIR	9	230	(38)	58479
34	2.9	0.0	0.0	chr1	30480861	30480896	(218475526)	+	(TGA)n	Simple_repeat	1	36	(0)	58480
1654	18.0	8.6	5.6	chr1	30480925	30480962	(218475460)	C	MLT2D	LTR/ERVL	(7)	407	378	58481
50	4.0	0.0	0.0	chr1	30480963	30481014	(218475408)	+	(TG)n	Simple_repeat	1	52	(0)	58482
3179	12.6	2.5	6.6	chr1	30491123	30491666	(218464756)	C	MER1A	DNA/hAT-Charlie	(8)	521	1	58506
505	19.0	25.6	0.0	chr1	30778294	30778456	(218177966)	+	MIR	SINE/MIR	21	239	(23)	59041
668	25.7	7.2	2.1	chr1	31712840	31713085	(217243337)	+	MIR	SINE/MIR	18	268	(0)	61195
285	27.3	0.0	0.0	chr1	31713151	31713227	(217243195)	C	MamRep564	Unknown	(198)	159	83	61196
3193	8.0	0.2	0.2	chr1	31816327	31816779	(217139643)	C	L1PREC2	LINE/L1	(2)	6158	5706	61366
1591	11.2	0.0	0.0	chr1	32272022	32272226	(216684196)	+	AluSz	SINE/Alu	21	225	(87)	62484
424	26.6	2.6	0.9	chr1	32291676	32291811	(216664611)	+	MIR3	SINE/MIR	37	170	(38)	62538
718	16.2	1.3	1.3	chr1	32401810	32401885	(216554537)	+	MER63D	DNA/hAT-Blackjack	138	213	(848)	62794
29811	16.3	3.8	3.9	chr1	32416762	32419222	(216537200)	+	HUERS-P3b-int	LTR/ERV1	2707	5222	(2196)	62818
14	27.3	0.0	3.6	chr1	33181241	33181328	(215775094)	+	G-rich	Low_complexity	1	84	(0)	64626
238	30.2	5.0	10.3	chr1	34521501	34521587	(214434835)	C	MIRb	SINE/MIR	(162)	106	22	66938
926	21.7	2.1	0.0	chr1	34521588	34521771	(214434651)	C	MER5A	DNA/hAT-Charlie	(0)	189	2	66939
238	30.2	5.0	10.3	chr1	34521772	34521790	(214434632)	C	MIRb	SINE/MIR	(247)	21	6	66938
352	26.1	0.0	1.1	chr1	34521784	34521872	(214434550)	+	L3	LINE/CR1	3937	4024	(75)	66940
26889	14.4	4.6	2.4	chr1	35132579	35137611	(213818811)	C	HERVH-int	LTR/ERV1	(2564)	5149	1	68105
196	30.0	0.0	0.0	chr1	36112583	36112642	(212843780)	+	L2b	LINE/L2	3309	3368	(7)	70157
396	30.3	0.7	7.7	chr1	36112739	36112906	(212843516)	C	MER5A1	DNA/hAT-Charlie	(0)	166	11	70158
1924	13.5	2.1	1.0	chr1	36115785	36116072	(212840350)	+	AluJr	SINE/Alu	6	296	(16)	70160
2372	8.4	0.7	0.0	chr1	36249194	36249490	(212706932)	C	AluY	SINE/Alu	(12)	299	1	70491
247	29.3	13.3	10.9	chr1	36249491	36249685	(212706737)	C	L2c	LINE/L2	(73)	3314	3085	70489
3450	10.9	1.2	0.0	chr1	36621168	36621651	(212334771)	C	MER1A	DNA/hAT-Charlie	(0)	529	40	71253
244	38.0	2.7	4.0	chr1	36863301	36863448	(212092974)	+	L2c	LINE/L2	2769	2914	(505)	71700
290	31.8	7.4	6.9	chr1	36863523	36863821	(212092601)	+	L2c	LINE/L2	2977	3266	(109)	71700
11	15.1	2.4	7.0	chr1	37476624	37476665	(211479757)	+	(CCAGCCC)n	Simple_repeat	1	43	(0)	72814
2171	13.2	2.2	5.8	chr1	38356127	38356342	(210600080)	+	THE1B	LTR/ERVL-MaLR	165	364	(0)	74550
1231	35.1	8.7	4.2	chr1	38587005	38587444	(210368978)	C	MamGyp-int	LTR/Gypsy	(1858)	3245	2789	74962
184	32.6	4.0	2.1	chr1	38818454	38818550	(210137872)	+	MIRb	SINE/MIR	86	184	(84)	75385
2359	8.7	0.7	0.0	chr1	40489855	40490164	(208466258)	C	AluSc	SINE/Alu	(0)	309	2	78915
2623	11.9	7.3	3.7	chr1	40490165	40490353	(208466069)	C	MSTB	LTR/ERVL-MaLR	(238)	188	2	78914
509	33.7	2.2	0.6	chr1	41476606	41476784	(207479638)	C	MER115	DNA/hAT-Tip100	(503)	190	9	80885
1107	24.7	5.3	2.7	chr1	42028787	42029117	(206927305)	C	MER102a	DNA/hAT-Charlie	(1)	340	1	81827
189	32.3	5.7	11.4	chr1	42165016	42165260	(206791162)	C	L2b	LINE/L2	(186)	3189	2960	82033
454	29.1	0.9	10.9	chr1	42165304	42165542	(206790880)	+	MIRb	SINE/MIR	54	268	(0)	82034
13	17.4	5.3	5.0	chr1	42334856	42334912	(206621510)	+	(AGGCCCC)n	Simple_repeat	1	60	(0)	82309
3743	24.8	3.2	5.7	chr1	42857723	42859436	(206096986)	+	HERVH-int	LTR/ERV1	590	2265	(4389)	83289
2884	11.6	7.0	0.0	chr1	42859447	42859884	(206096538)	+	LTR7C	LTR/ERV1	1	471	(0)	83290
444	27.4	3.0	1.4	chr1	43163747	43163920	(205792502)	+	HAL1	LINE/L1	1629	1853	(612)	83880
885	14.2	0.0	0.8	chr1	43304101	43304234	(205652188)	C	FLAM_C	SINE/Alu	(10)	133	1	84119
181	33.9	14.1	0.0	chr1	43304420	43304590	(205651832)	C	L2	LINE/L2	(1417)	2002	1804	84117
2448	7.9	0.3	0.0	chr1	43568018	43568320	(205388102)	+	AluSx1	SINE/Alu	5	308	(4)	84510
18	7.4	0.0	3.2	chr1	43903439	43903469	(205052953)	+	(CCT)n	Simple_repeat	1	31	(0)	85125
2717	26.1	7.4	4.2	chr1	44072018	44072408	(204884014)	C	L2	LINE/L2	(704)	2715	2298	85372
1632	15.6	8.0	0.3	chr1	44072409	44072525	(204883897)	+	AluJr	SINE/Alu	1	121	(191)	85373
12	27.5	4.3	2.8	chr1	44138102	44138170	(204818252)	+	G-rich	Low_complexity	1	72	(0)	85528
17	23.8	3.9	0.0	chr1	44138208	44138258	(204818164)	+	GA-rich	Low_complexity	1	53	(0)	85529
1710	24.8	5.9	2.3	chr1	44874149	44874658	(204081764)	C	HAL1	LINE/L1	(435)	2072	1518	86890
1781	15.8	2.4	0.0	chr1	45001559	45001843	(203954579)	C	AluJb	SINE/Alu	(16)	296	5	87188
8498	18.3	3.9	1.2	chr1	45235789	45237204	(203719218)	+	MSTB-int	LTR/ERVL-MaLR	193	1651	(0)	87570
2380	14.2	1.6	11.1	chr1	45237205	45237673	(203718749)	+	MSTB	LTR/ERVL-MaLR	1	424	(2)	87570
729	16.4	4.5	0.8	chr1	45493366	45493493	(203462929)	+	AluJo	SINE/Alu	1	133	(179)	88155
1149	23.6	8.1	13.9	chr1	45800388	45800982	(203155440)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	4	88812
3651	12.2	0.4	1.3	chr1	45969351	45969884	(202986538)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	89110
1296	26.5	4.6	0.6	chr1	45974814	45975166	(202981256)	C	L2	LINE/L2	(2588)	831	464	89118
290	29.8	6.5	6.8	chr1	46206138	46206340	(202750082)	+	MIRc	SINE/MIR	2	193	(15)	89547
17	21.5	2.0	1.9	chr1	46533437	46533504	(202422918)	+	G-rich	Low_complexity	1	68	(0)	90204
16	16.3	0.0	2.8	chr1	47438097	47438132	(201518290)	+	(GCG)n	Simple_repeat	1	36	(0)	91599
479	29.3	17.2	5.0	chr1	47503413	47504128	(201452294)	C	L2	LINE/L2	(674)	2745	1906	91733
2298	11.3	0.3	0.3	chr1	47504129	47504430	(201451992)	C	AluSz	SINE/Alu	(10)	302	1	91734
26	32.6	3.8	1.4	chr1	47756854	47756986	(201199436)	+	(CT)n	Simple_repeat	1	138	(0)	92249
18	19.4	2.0	2.0	chr1	47757177	47757225	(201199197)	+	(AACAA)n	Simple_repeat	1	50	(0)	92250
2266	15.5	3.3	3.5	chr1	48287055	48287408	(200669014)	C	MSTA	LTR/ERVL-MaLR	(62)	366	1	93128
2365	14.6	3.6	1.5	chr1	48287410	48287819	(200668603)	+	MSTB	LTR/ERVL-MaLR	8	426	(0)	93130
2162	12.0	0.7	0.3	chr1	49066272	49066563	(199889859)	+	AluSc8	SINE/Alu	1	293	(18)	94550
13	19.2	2.2	4.3	chr1	50023922	50023966	(198932456)	+	(GGCGGCA)n	Simple_repeat	1	46	(0)	95990
14	22.9	2.9	5.7	chr1	50023967	50023987	(198932435)	+	G-rich	Low_complexity	3	70	(0)	95991
2091	23.6	15.9	1.5	chr1	50215167	50215969	(198740453)	+	L2	LINE/L2	759	1699	(1720)	96342
2853	13.0	1.4	0.0	chr1	50831867	50832273	(198124149)	+	MER1A	DNA/hAT-Charlie	117	529	(0)	97509
2075	15.6	1.1	1.6	chr1	51825831	51826194	(197130228)	+	MLT1A0	LTR/ERVL-MaLR	2	363	(2)	99507
1832	15.9	0.3	5.5	chr1	52545840	52546165	(196410257)	+	AluJb	SINE/Alu	1	309	(3)	101078
524	30.3	3.1	10.1	chr1	52588317	52588632	(196367790)	C	L2c	LINE/L2	(10)	3377	3085	101183
431	28.2	4.9	3.1	chr1	52588639	52588799	(196367623)	+	L2c	LINE/L2	2997	3160	(227)	101184
210	26.7	3.2	1.6	chr1	53413762	53413822	(195542600)	C	L2a	LINE/L2	(50)	3337	3276	103053
221	28.7	0.0	13.4	chr1	53682251	53682399	(195274023)	C	L2b	LINE/L2	(1)	3374	3246	103544
272	34.2	9.0	10.2	chr1	55124853	55125256	(193831166)	+	L2c	LINE/L2	2945	3343	(44)	106512
250	27.5	2.4	0.0	chr1	55524560	55524639	(193431783)	+	MIR3	SINE/MIR	103	184	(24)	107259
535	23.1	14.6	1.3	chr1	55930719	55930955	(193025467)	C	ORSL	DNA/hAT-Tip100	(0)	275	2	107898
637	28.8	1.0	5.5	chr1	57263027	57263120	(191693302)	+	MIRb	SINE/MIR	68	158	(110)	110460
324	12.8	0.0	0.0	chr1	58047340	58047386	(190909036)	C	MER33	DNA/hAT-Charlie	(259)	65	25	112068
540	36.1	3.2	0.0	chr1	58613549	58613817	(190342605)	+	HUERS-P1-int	LTR/ERV1	5985	6262	(1)	113185
3605	15.7	2.8	2.8	chr1	58613820	58614421	(190342001)	+	LTR26	LTR/ERV1	2	603	(0)	113185
629	28.6	14.3	6.5	chr1	58644563	58645082	(190311340)	+	LTR67B	LTR/ERVL	57	618	(2)	113239
964	17.4	5.2	1.6	chr1	59061334	59061520	(189894902)	+	MLT1A0	LTR/ERVL-MaLR	1	194	(171)	114106
1278	11.6	3.6	0.0	chr1	59444277	59444492	(189511930)	C	L1MA5A	LINE/L1	(1)	6296	6073	114887
308	8.7	0.0	0.0	chr1	59444513	59444558	(189511864)	+	L1MA5A	LINE/L1	6074	6119	(178)	114888
1942	14.4	0.0	0.6	chr1	59444559	59444872	(189511550)	+	MER1B	DNA/hAT-Charlie	28	339	(0)	114889
321	29.8	16.4	1.2	chr1	59685879	59686250	(189270172)	C	L4_C_Mam	LINE/RTE-X	(211)	4927	4279	115271
23089	6.0	1.8	0.2	chr1	62180580	62183445	(186772977)	C	HERVK14-int	LTR/ERVK	(3184)	2912	1	119662
2721	5.8	0.3	0.3	chr1	62183446	62183789	(186772633)	C	LTR14A	LTR/ERVK	(0)	344	1	119662
28	40.0	2.7	0.7	chr1	62275816	62275962	(186680460)	+	GA-rich	Low_complexity	1	151	(0)	119887
311	32.9	17.4	3.6	chr1	62276057	62276277	(186680145)	C	L3	LINE/CR1	(148)	3951	3694	119888
2342	9.3	0.0	0.7	chr1	62305310	62305610	(186650812)	C	AluSx1	SINE/Alu	(13)	299	1	119950
326	30.3	0.0	3.5	chr1	62305820	62305932	(186650490)	C	MIRb	SINE/MIR	(52)	216	108	119951
12	22.5	2.7	0.0	chr1	63322195	63322231	(185634191)	+	G-rich	Low_complexity	1	38	(0)	121838
11	21.5	8.2	0.0	chr1	63322267	63322315	(185634107)	+	(CCCACG)n	Simple_repeat	1	53	(0)	121839
13	13.2	0.0	0.0	chr1	63322293	63322317	(185634105)	+	(CACC)n	Simple_repeat	1	25	(0)	121840
299	26.2	12.9	9.2	chr1	63679564	63679748	(185276674)	C	MIRc	SINE/MIR	(10)	198	6	122471
2441	14.7	3.2	2.1	chr1	63679751	63680175	(185276247)	+	MSTB1	LTR/ERVL-MaLR	3	432	(0)	122472
3900	10.0	0.8	0.0	chr1	63814366	63814877	(185141545)	C	MER1A	DNA/hAT-Charlie	(0)	529	14	122759
911	28.6	7.9	1.2	chr1	63954163	63954494	(185001928)	C	MLT1J	LTR/ERVL-MaLR	(156)	356	1	123009
266	18.8	0.9	0.0	chr1	64745611	64745674	(184210748)	C	MIR1_Amn	SINE/MIR	(89)	141	70	124433
13	9.8	0.0	0.0	chr1	65002691	65002712	(183953710)	+	(CGG)n	Simple_repeat	1	22	(0)	124874
1623	25.7	6.9	7.4	chr1	66386415	66387414	(182569008)	+	L1ME4a	LINE/L1	1070	2064	(4336)	127138
484	27.8	10.5	1.4	chr1	67890529	67890736	(181065686)	C	MIRc	SINE/MIR	(22)	246	18	129769
291	37.9	2.4	4.7	chr1	68363254	68363552	(180592870)	C	L2c	LINE/L2	(78)	3309	3018	130548
227	34.0	2.5	9.0	chr1	68363609	68363863	(180592559)	C	L2c	LINE/L2	(499)	2920	2683	130548
7868	17.6	2.9	1.9	chr1	69943989	69946329	(179010093)	C	L1MB1	LINE/L1	(23)	6643	4289	132661
13000	6.3	0.1	0.2	chr1	74742798	74744488	(174211934)	C	HERV9-int	LTR/ERV1	(2421)	2953	1265	139090
1537	23.2	1.7	1.0	chr1	75071476	75071971	(173884451)	C	MLT2F	LTR/ERVL	(119)	544	1	139499
2734	5.3	0.6	0.0	chr1	75354349	75354690	(173601732)	+	LTR14A	LTR/ERVK	1	344	(0)	139847
2264	17.1	2.6	1.7	chr1	76239342	76239763	(172716659)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	141149
1833	18.9	5.4	1.6	chr1	77242914	77243284	(171713138)	C	MSTB	LTR/ERVL-MaLR	(0)	426	41	142566
35	11.7	2.8	2.7	chr1	77243285	77243355	(171713067)	+	(TTTC)n	Simple_repeat	1	73	(0)	142567
1335	19.8	0.0	2.2	chr1	77243359	77243590	(171712832)	C	AluSx3	SINE/Alu	(2)	309	83	142568
2654	4.7	0.3	0.0	chr1	77270357	77270657	(171685765)	C	AluYk4	SINE/Alu	(8)	303	2	142597
266	32.8	1.6	7.8	chr1	77270659	77270787	(171685635)	C	LTR78B	LTR/ERV1	(917)	379	259	142598
298	37.5	2.0	1.4	chr1	77540380	77540525	(171415897)	C	MER117	DNA/hAT-Charlie	(32)	165	19	143065
1213	24.6	2.2	12.8	chr1	80100776	80101371	(168855051)	+	HERV35I-int	LTR/ERV1	3341	3872	(3046)	146730
3136	19.6	6.5	2.6	chr1	80101434	80102517	(168853905)	+	MER57A-int	LTR/ERV1	1635	2573	(2550)	146728
6287	25.2	6.1	2.2	chr1	80606021	80607684	(168348738)	+	MSTD-int	LTR/ERVL-MaLR	2	1735	(0)	147417
1221	27.1	2.3	4.2	chr1	80607685	80608088	(168348334)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	147417
9568	7.2	12.0	0.4	chr1	81177784	81179177	(167777245)	C	LTR12C	LTR/ERV1	(0)	1579	2	148096
344	34.0	16.4	0.0	chr1	81312879	81313072	(167643350)	+	MIRb	SINE/MIR	4	235	(33)	148271
667	33.2	6.0	9.0	chr1	83232708	83233048	(165723374)	C	MLT1I-int	LTR/ERVL-MaLR	(587)	800	483	150899
479	29.6	8.6	4.9	chr1	83233123	83233446	(165722976)	C	MLT1I-int	LTR/ERVL-MaLR	(1049)	338	2	150899
1061	26.7	14.2	2.0	chr1	83653185	83653783	(165302639)	+	LTR50	LTR/ERVL	1	684	(111)	151453
12	7.7	3.2	6.2	chr1	83858995	83859025	(165097397)	+	(ATTA)n	Simple_repeat	1	32	(0)	151742
2711	18.2	5.3	3.3	chr1	84206362	84206912	(164749510)	C	MER68	LTR/ERVL	(0)	563	1	152193
6324	10.6	14.0	1.8	chr1	84287017	84288098	(164668324)	+	MER11B	LTR/ERVK	1	1236	(0)	152315
3859	11.7	0.9	0.9	chr1	84778622	84779149	(164177273)	+	MER1A	DNA/hAT-Charlie	1	528	(1)	153066
422	24.4	9.2	0.0	chr1	84833358	84833476	(164122946)	+	MIRb	SINE/MIR	79	209	(59)	153176
758	25.8	1.7	5.0	chr1	84833589	84833829	(164122593)	+	MIR	SINE/MIR	6	238	(24)	153177
3752	10.3	0.9	1.1	chr1	84898552	84899080	(164057342)	C	MER1A	DNA/hAT-Charlie	(1)	528	1	153281
290	25.6	13.2	0.8	chr1	85028702	85028827	(163927595)	+	MIR	SINE/MIR	112	255	(7)	153478
1874	18.4	5.8	4.8	chr1	85650537	85650993	(163305429)	C	MSTA1	LTR/ERVL-MaLR	(3)	462	1	154509
2100	12.3	0.0	5.4	chr1	86228317	86228633	(162727789)	C	AluSz	SINE/Alu	(12)	300	1	155319
10822	11.8	2.0	0.4	chr1	86376886	86378486	(162577936)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	4	155517
445	22.3	1.0	1.0	chr1	86587362	86587465	(162368957)	+	LTR45B	LTR/ERV1	24	127	(362)	155819
753	15.9	4.7	7.4	chr1	86587532	86587726	(162368696)	+	LTR45B	LTR/ERV1	322	521	(4)	155819
10004	10.9	4.5	3.1	chr1	87012594	87014151	(161942271)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	156479
344	32.6	4.8	1.1	chr1	87616327	87616506	(161339916)	+	MLT1L	LTR/ERVL-MaLR	420	606	(4)	157298
2206	11.3	0.0	0.3	chr1	90855667	90855967	(158100455)	C	AluSq	SINE/Alu	(13)	300	1	161865
3277	0.6	0.0	0.0	chr1	91387229	91387590	(157568832)	C	LSU-rRNA_Hsa	rRNA	(540)	4495	4134	162636
344	28.2	0.0	8.3	chr1	91655917	91656036	(157300386)	C	ERV3-16A3_I-int	LTR/ERVL	(3921)	1075	966	163056
1441	21.2	11.3	5.4	chr1	91656045	91656548	(157299874)	+	MLT1E1A	LTR/ERVL-MaLR	11	680	(0)	163057
17	20.1	0.0	0.0	chr1	91886295	91886334	(157070088)	+	(CCCCCTC)n	Simple_repeat	1	40	(0)	163409
416	29.7	6.3	2.6	chr1	92087575	92087726	(156868696)	C	L2c	LINE/L2	(69)	3318	3161	163862
5107	13.8	3.7	1.0	chr1	92153371	92153869	(156802553)	C	L1MB1	LINE/L1	(1)	6809	6289	163984
2638	14.1	1.4	0.9	chr1	92153870	92154293	(156802129)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	163985
1597	16.0	0.4	2.3	chr1	92710101	92710356	(156246066)	+	AluJb	SINE/Alu	41	291	(21)	164917
1437	18.0	17.3	8.4	chr1	92747740	92748092	(156208330)	C	MLT1C	LTR/ERVL-MaLR	(58)	409	1	164972
309	29.1	0.0	0.0	chr1	92748115	92748205	(156208217)	+	MLT1G3	LTR/ERVL-MaLR	82	172	(407)	164974
10736	9.5	5.0	0.3	chr1	93242516	93244021	(155712401)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	165978
538	30.6	14.0	3.6	chr1	93980693	93981024	(154975398)	C	MLT1J	LTR/ERVL-MaLR	(133)	379	8	167113
2448	8.5	5.1	2.8	chr1	94140293	94140656	(154815766)	+	THE1C	LTR/ERVL-MaLR	3	375	(0)	167345
257	30.6	4.5	19.4	chr1	94140663	94140697	(154815725)	+	MIRb	SINE/MIR	26	58	(210)	167346
1225	18.4	16.1	0.0	chr1	94140698	94140947	(154815475)	C	AluJr4	SINE/Alu	(13)	299	2	167347
3265	13.9	4.9	0.4	chr1	94562312	94562816	(154393606)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	167971
3127	8.7	2.0	0.9	chr1	94572384	94572826	(154383596)	C	LTR7	LTR/ERV1	(2)	448	1	167978
3148	15.2	4.2	4.5	chr1	94572827	94573488	(154382934)	C	L1M4	LINE/L1	(5531)	1986	1327	167977
4645	4.8	3.8	0.3	chr1	95167440	95168023	(153788399)	+	LTR14B	LTR/ERVK	4	608	(0)	168956
287	34.4	8.4	6.0	chr1	95743333	95743584	(153212838)	C	L2a	LINE/L2	(245)	3181	2911	169755
1240	29.6	13.6	1.1	chr1	95743600	95744156	(153212266)	C	L2a	LINE/L2	(633)	2786	2149	169755
11051	11.3	2.2	0.1	chr1	101039940	101041529	(147914893)	C	MSTA-int	LTR/ERVL-MaLR	(6)	1625	1	177391
7226	17.3	2.9	1.0	chr1	104991439	104992790	(143963632)	+	Tigger2	DNA/TcMar-Tigger	38	1416	(1302)	182316
6301	7.8	1.8	0.6	chr1	107869654	107870642	(141085780)	C	L1PB1	LINE/L1	(1)	6150	5148	186000
213	26.8	14.0	1.1	chr1	107871368	107871454	(141084968)	C	L3b	LINE/CR1	(139)	5093	4994	186002
7750	6.4	0.2	0.2	chr1	108517445	108518412	(140438010)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	186859
20852	11.7	0.9	2.1	chr1	108518413	108521195	(140435227)	C	L1PA8	LINE/L1	(3669)	2792	8	186858
322	35.9	7.5	2.6	chr1	108583893	108584270	(140372152)	C	L2	LINE/L2	(1281)	2138	1741	186954
447	33.3	4.8	0.0	chr1	110251725	110251922	(138704500)	C	MIRc	SINE/MIR	(59)	209	2	189801
487	31.9	4.6	1.4	chr1	110474045	110474254	(138482168)	+	L2c	LINE/L2	3133	3349	(38)	190217
343	25.5	8.5	2.6	chr1	110474450	110474570	(138481852)	C	L2a	LINE/L2	(16)	3410	3231	190218
12	23.7	4.6	4.4	chr1	112715463	112715527	(136240895)	+	(CCCCGG)n	Simple_repeat	1	68	(0)	193631
195	25.9	5.5	1.2	chr1	113072597	113072682	(135883740)	C	L2c	LINE/L2	(11)	3376	3287	194421
3562	11.9	1.7	0.9	chr1	113745490	113746014	(135210408)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	195448
21	21.8	0.0	0.0	chr1	113783455	113783497	(135172925)	+	A-rich	Low_complexity	1	43	(0)	195506
539	27.4	17.6	2.0	chr1	113783542	113783894	(135172528)	+	MLT1J	LTR/ERVL-MaLR	42	461	(51)	195507
254	29.0	2.5	12.8	chr1	117155765	117156037	(131800385)	+	L2c	LINE/L2	3101	3344	(43)	200840
249	21.7	8.4	6.5	chr1	117650884	117651048	(131305374)	C	LTR85a	LTR/Gypsy?	(352)	432	263	201614
2310	10.4	4.2	0.0	chr1	117821693	117822010	(131134412)	C	LTR18C	LTR/ERVL	(13)	332	1	201836
438	32.6	0.0	4.3	chr1	117822012	117822152	(131134270)	+	MER5A	DNA/hAT-Charlie	55	189	(0)	201837
407	30.3	5.3	4.2	chr1	118185498	118185738	(130770684)	C	L3	LINE/CR1	(71)	4028	3785	202420
826	19.8	3.2	9.8	chr1	118602564	118602798	(130353624)	+	MER90a	LTR/ERV1	72	290	(324)	202962
1802	17.2	5.2	0.3	chr1	118602812	118603144	(130353278)	+	MLT1A	LTR/ERVL-MaLR	14	363	(11)	202963
201	22.7	5.7	1.5	chr1	119229454	119229520	(129726902)	C	MER91C	DNA/hAT-Tip100	(35)	105	36	203789
992	27.8	11.4	3.6	chr1	119299009	119299452	(129656970)	+	MLT1G1	LTR/ERVL-MaLR	97	579	(0)	203923
16074	8.1	5.0	0.8	chr1	119485737	119489123	(129467299)	C	LTR19-int	LTR/ERV1	(2052)	3534	1	204160
1046	28.4	8.0	2.1	chr1	120368141	120368748	(128587674)	+	Charlie7	DNA/hAT-Charlie	44	690	(1922)	205439
1524	0.0	0.0	0.0	chr1	143729407	143729570	(105226852)	C	U1	snRNA	(1)	164	1	208249
1258	28.1	8.2	2.1	chr1	144510261	144510867	(104445555)	C	Charlie7	DNA/hAT-Charlie	(1922)	690	44	209520
1490	0.6	0.0	0.0	chr1	144560666	144560829	(104395593)	C	U1	snRNA	(1)	164	1	209628
1502	1.2	0.0	0.0	chr1	145465617	145465780	(103490642)	C	U1	snRNA	(1)	164	1	210998
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
1267	27.5	8.8	2.8	chr1	146423019	146423625	(102532797)	+	Charlie7	DNA/hAT-Charlie	44	690	(1922)	212633
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
1549	12.6	4.3	0.4	chr1	147234109	147234356	(101722066)	+	LTR14B	LTR/ERVK	351	608	(0)	213826
1439	14.9	5.1	1.3	chr1	147246993	147247230	(101709192)	C	L1MD1	LINE/L1	(3169)	3368	3124	213845
2542	14.0	2.5	3.7	chr1	147247231	147247667	(101708755)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	213846
1781	19.2	6.8	0.9	chr1	147396278	147396702	(101559720)	C	L1MD1	LINE/L1	(1790)	4747	4296	214025
2129	18.3	4.9	0.5	chr1	147396703	147397109	(101559313)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	214027
1505	0.6	0.0	0.0	chr1	148038753	148038916	(100917506)	C	U1	snRNA	(1)	164	1	215030
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
1388	3.7	0.0	0.0	chr1	148362370	148362533	(100593889)	C	U1	snRNA	(1)	164	1	215562
253	9.1	0.0	0.0	chr1	148385275	148385307	(100571115)	C	U1	snRNA	(0)	165	133	215614
1748	19.5	12.8	7.2	chr1	148385308	148385822	(100570600)	C	LTR4	LTR/ERV1	(0)	596	49	215615
1305	27.6	8.7	2.6	chr1	149149198	149149804	(99806618)	C	Charlie7	DNA/hAT-Charlie	(1922)	690	44	216756
18	21.8	4.5	2.9	chr1	149390509	149390575	(99565847)	+	(GGC)n	Simple_repeat	1	70	(0)	217148
15	19.8	8.6	0.0	chr1	149390631	149390688	(99565734)	+	(GGCGGA)n	Simple_repeat	1	63	(0)	217149
12	20.4	2.4	2.4	chr1	151071222	151071262	(97885160)	+	G-rich	Low_complexity	1	42	(0)	220420
261	34.2	9.4	7.9	chr1	151846050	151847013	(97109409)	+	L2c	LINE/L2	2315	3411	(15)	221974
13	4.5	0.0	7.4	chr1	151945813	151945839	(97010583)	+	(AACA)n	Simple_repeat	1	27	(0)	222171
2256	20.5	1.6	0.7	chr1	152148950	152149371	(96807051)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	222447
4886	25.1	7.2	4.3	chr1	152531292	152531388	(96425034)	C	L1MC5a	LINE/L1	(259)	2518	2425	222919
2725	6.4	0.6	0.0	chr1	152531389	152531730	(96424692)	C	LTR14A	LTR/ERVK	(0)	344	1	222921
1960	9.4	1.4	18.7	chr1	152618834	152619250	(96337172)	C	LTR14B	LTR/ERVK	(0)	608	1	222987
254	31.6	11.6	5.5	chr1	152734059	152734276	(96222146)	C	MIRb	SINE/MIR	(11)	257	25	223142
15	22.0	8.3	1.5	chr1	152734322	152734346	(96222076)	+	(CT)n	Simple_repeat	1	27	(0)	223143
2242	11.7	0.0	0.0	chr1	152734347	152734645	(96221777)	C	AluSg	SINE/Alu	(7)	303	5	223144
358	26.0	2.8	0.9	chr1	153698435	153698539	(95257883)	C	MIRc	SINE/MIR	(0)	268	162	224565
669	17.2	2.0	0.2	chr1	154295734	154295883	(94660539)	+	L1M4a1	LINE/L1	1631	1779	(800)	225844
1610	10.5	0.0	22.4	chr1	154295884	154296085	(94660337)	+	AluSz6	SINE/Alu	1	133	(179)	225857
563	30.2	5.0	10.0	chr1	154887861	154888313	(94068109)	+	L2b	LINE/L2	2820	3225	(150)	226963
4291	7.7	5.1	0.2	chr1	154908104	154908678	(94047744)	+	LTR14B	LTR/ERVK	4	608	(0)	227013
227	21.8	1.8	8.3	chr1	155622322	155622381	(93334041)	C	LTR12F	LTR/ERV1	(463)	56	1	228462
3270	24.1	1.2	4.5	chr1	155622390	155623035	(93333387)	C	HERV17-int	LTR/ERV1	(0)	8626	7979	228462
4079	10.5	1.3	6.0	chr1	155623036	155623673	(93332749)	C	LTR14B	LTR/ERVK	(0)	608	1	228463
469	22.8	9.3	0.0	chr1	156746426	156746552	(92209870)	C	MIR3	SINE/MIR	(31)	177	38	230671
13	21.7	7.5	0.0	chr1	157154705	157154715	(91801707)	+	(TCTCCCC)n	Simple_repeat	1	55	(0)	231345
14	21.1	0.0	2.5	chr1	157154716	157154755	(91801667)	+	(CCCTCT)n	Simple_repeat	1	40	(0)	231346
1473	18.7	7.4	1.8	chr1	157306852	157307194	(91649228)	+	THE1D	LTR/ERVL-MaLR	15	378	(3)	231555
2224	16.7	2.5	6.5	chr1	157433733	157434239	(91522183)	+	LTR19A	LTR/ERV1	1	486	(0)	231711
7031	11.3	2.2	1.3	chr1	157434240	157435233	(91521189)	+	LTR19-int	LTR/ERV1	1	1003	(4583)	231711
4991	13.2	6.3	0.4	chr1	160079616	160080414	(88876008)	+	L1MC1	LINE/L1	5483	6332	(1)	235201
518	27.6	7.1	1.3	chr1	160080429	160080586	(88875836)	+	MIRb	SINE/MIR	40	207	(61)	235202
17	20.4	1.9	3.6	chr1	160400510	160400563	(88555859)	+	(CCCCCG)n	Simple_repeat	1	55	(0)	235700
7163	9.5	0.3	1.6	chr1	160913142	160914118	(88042304)	+	LTR5_Hs	LTR/ERVK	1	964	(4)	236465
2478	12.4	3.1	0.3	chr1	160914138	160914509	(88041913)	C	MER57B1	LTR/ERV1	(18)	383	1	236466
2078	14.0	0.3	1.3	chr1	160921392	160921698	(88034724)	+	AluSx	SINE/Alu	1	304	(8)	236474
11439	10.0	1.1	0.5	chr1	160921699	160922772	(88033650)	+	THE1B-int	LTR/ERVL-MaLR	497	1580	(0)	236473
2625	19.2	2.7	3.9	chr1	160971573	160972137	(87984285)	C	MER74A	LTR/ERVL	(0)	558	1	236587
71	1.6	0.0	0.0	chr1	161097673	161097737	(87858685)	+	(TC)n	Simple_repeat	1	65	(0)	236861
38	4.3	0.0	2.0	chr1	161097738	161097777	(87858645)	+	(TG)n	Simple_repeat	2	41	(0)	236862
20	0.0	0.0	0.0	chr1	161225920	161225941	(87730481)	+	(T)n	Simple_repeat	1	22	(0)	237108
663	1.3	0.0	0.0	chr1	161448240	161448314	(87508108)	C	tRNA-Asp-GAY	tRNA	(0)	75	1	237553
30	18.5	0.0	0.0	chr1	161451826	161451897	(87504525)	+	(CA)n	Simple_repeat	1	72	(0)	237561
663	1.3	0.0	0.0	chr1	161455621	161455695	(87500727)	C	tRNA-Asp-GAY	tRNA	(0)	75	1	237568
640	0.0	0.0	0.0	chr1	161462019	161462090	(87494332)	C	tRNA-Glu-GAG_	tRNA	(3)	72	1	237582
663	1.3	0.0	0.0	chr1	161470412	161470486	(87485936)	C	tRNA-Asp-GAY	tRNA	(0)	75	1	237599
30605	6.4	0.4	0.4	chr1	161473230	161478266	(87478156)	+	HERV9NC-int	LTR/ERV1	40	5284	(834)	237606
1224	20.4	2.3	10.2	chr1	162616770	162617029	(86339393)	C	L1M4	LINE/L1	(5534)	2102	1808	239485
5003	23.0	4.9	1.1	chr1	162617036	162618182	(86338240)	C	L1M4	LINE/L1	(6307)	1572	380	239485
12	13.9	0.0	0.0	chr1	163561706	163561729	(85394693)	+	(CTTT)n	Simple_repeat	1	24	(0)	240946
12047	9.9	2.4	0.0	chr1	165079034	165080571	(83875851)	+	THE1B-int	LTR/ERVL-MaLR	1	1576	(4)	243083
2096	12.0	3.9	3.2	chr1	165328991	165329368	(83627054)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	243464
13355	14.8	4.5	2.3	chr1	167146217	167147736	(81808686)	C	L1M4c	LINE/L1	(3925)	2459	923	246214
844	24.2	5.5	7.6	chr1	167699240	167699699	(81256723)	C	MLT1C	LTR/ERVL-MaLR	(20)	485	34	247155
188	28.2	1.3	4.9	chr1	168137392	168137473	(80818949)	C	L2b	LINE/L2	(1)	3374	3296	247861
4042	7.2	2.8	1.4	chr1	168457166	168457732	(80498690)	+	LTR14C	LTR/ERVK	12	586	(1)	248437
105	15.2	1.4	1.8	chr1	168457733	168457864	(80498558)	+	(TCTT)n	Simple_repeat	1	215	(0)	248438
346	25.5	18.5	3.7	chr1	168623497	168623648	(80332774)	+	MIRc	SINE/MIR	6	175	(55)	248661
10742	7.0	12.6	0.1	chr1	169661034	169662412	(79294010)	+	LTR12C	LTR/ERV1	3	1579	(0)	250267
5877	19.8	5.9	4.3	chr1	170043147	170044539	(78911883)	+	MER4B-int	LTR/ERV1	3553	4968	(1790)	250797
5973	21.3	6.6	2.2	chr1	170043560	170044881	(78911541)	+	MER21-int	LTR/ERVL	1054	2437	(1754)	250798
22	0.0	0.0	0.0	chr1	170159422	170159445	(78796977)	+	(T)n	Simple_repeat	1	24	(0)	250939
484	29.0	9.7	0.5	chr1	170159517	170159723	(78796699)	C	L1M6B	LINE/L1	(2231)	234	3	250937
22684	8.9	1.1	1.0	chr1	170451717	170456048	(78500374)	C	L1PA7	LINE/L1	(0)	6469	2170	251338
11602	9.4	1.2	1.8	chr1	170601144	170602732	(78353690)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	251528
9243	12.7	8.4	2.0	chr1	172813699	172815220	(76141202)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	254729
524	31.7	10.8	6.8	chr1	173020918	173021679	(75934743)	+	L2	LINE/L2	1815	2610	(809)	255009
12	27.6	0.0	0.0	chr1	174022435	174022473	(74933949)	+	GA-rich	Low_complexity	1	39	(0)	256539
6246	17.9	4.5	0.0	chr1	177792273	177793350	(71163072)	C	LTR28C	LTR/ERV1	(0)	1129	1	262097
1853	9.8	2.6	1.1	chr1	178118211	178118478	(70837944)	C	Charlie3	DNA/hAT-Charlie	(0)	2706	2435	262611
16597	9.0	0.4	1.1	chr1	178118475	178118856	(70837566)	C	Charlie3	DNA/hAT-Charlie	(470)	2236	1866	262611
3188	11.2	8.7	2.0	chr1	178361634	178362125	(70594297)	C	MER1A	DNA/hAT-Charlie	(1)	528	1	262975
410	29.2	3.3	1.3	chr1	178934060	178934208	(70022214)	+	MIRb	SINE/MIR	108	259	(9)	263854
221	33.3	0.0	0.0	chr1	179091571	179091633	(69864789)	C	L2c	LINE/L2	(25)	3362	3300	264125
1745	17.9	2.0	1.7	chr1	179271892	179272188	(69684234)	+	AluJo	SINE/Alu	2	299	(13)	264513
327	25.0	13.3	4.3	chr1	179272189	179272300	(69684122)	+	Charlie16a	DNA/hAT-Charlie	213	342	(0)	264512
2175	11.3	2.7	0.0	chr1	179333559	179333849	(69622573)	+	AluSp	SINE/Alu	1	299	(14)	264654
1980	19.5	8.5	2.2	chr1	179334075	179334568	(69621854)	C	LTR64	LTR/ERV1	(0)	528	1	264655
660	28.0	13.6	3.8	chr1	179389273	179389460	(69566962)	C	L1MEd	LINE/L1	(6217)	869	632	264766
250	29.1	7.6	2.5	chr1	179389661	179389822	(69566600)	C	L1MEd	LINE/L1	(6914)	172	2	264766
1655	33.4	7.2	3.7	chr1	179584506	179585324	(69371098)	+	ERVL-B4-int	LTR/ERVL	1678	2529	(3185)	265034
3094	16.1	3.0	5.3	chr1	179826977	179827473	(69128949)	C	L1MB3	LINE/L1	(2)	6181	5680	265371
295	12.7	1.8	5.2	chr1	180369145	180369202	(68587220)	C	MER115	DNA/hAT-Tip100	(0)	693	638	266270
431	37.9	1.2	3.6	chr1	180369198	180369364	(68587058)	C	MER115	DNA/hAT-Tip100	(270)	423	261	266270
2046	15.7	0.0	4.0	chr1	180437948	180438299	(68518123)	+	MER1B	DNA/hAT-Charlie	2	339	(0)	266362
2779	12.2	2.5	2.5	chr1	180734178	180734621	(68221801)	C	LOR1a	LTR/ERV1	(0)	497	54	266873
250	27.1	3.2	10.1	chr1	180734749	180734916	(68221506)	C	L2c	LINE/L2	(1260)	2159	2004	266866
109	0.0	6.0	0.0	chr1	181023029	181023145	(67933277)	+	(TC)n	Simple_repeat	1	124	(0)	267309
276	28.7	7.4	1.1	chr1	181185171	181185258	(67771164)	+	L2b	LINE/L2	3279	3372	(3)	267618
418	30.4	14.6	7.1	chr1	181185262	181185601	(67770821)	C	L2c	LINE/L2	(62)	3325	2956	267617
1824	12.9	0.3	7.1	chr1	183286082	183286391	(65670031)	C	AluJb	SINE/Alu	(23)	289	1	270855
2405	11.4	0.0	0.0	chr1	183326094	183326401	(65630021)	+	AluSx	SINE/Alu	1	308	(4)	270933
454	34.4	4.3	8.7	chr1	183326402	183326614	(65629808)	C	L2a	LINE/L2	(230)	3196	2975	270932
289	22.8	5.9	5.2	chr1	184608125	184608258	(64348164)	+	L1ME3Cz	LINE/L1	855	989	(8)	272922
2245	13.6	0.0	0.0	chr1	185131859	185132167	(63824255)	+	AluSz	SINE/Alu	1	309	(3)	273804
1929	28.5	13.8	11.0	chr1	185132168	185132235	(63824187)	+	HAL1	LINE/L1	1299	1347	(1160)	273802
2230	12.8	0.0	0.3	chr1	185132236	185132548	(63823874)	+	AluSz	SINE/Alu	1	312	(0)	273805
434	33.6	7.7	9.1	chr1	186503922	186504556	(62451866)	C	L2c	LINE/L2	(0)	3387	2766	275698
3186	12.3	4.5	1.9	chr1	186903429	186903943	(62052479)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	276281
456	35.9	0.8	3.8	chr1	190499585	190499845	(58456577)	+	L1MEg	LINE/L1	6	258	(5826)	280981
674	19.7	0.0	4.5	chr1	190499867	190499999	(58456423)	+	MER1A	DNA/hAT-Charlie	3	129	(400)	280982
2460	13.2	3.2	1.3	chr1	190500001	190500391	(58456031)	+	MER1A	DNA/hAT-Charlie	131	529	(0)	280983
8885	4.8	16.7	0.1	chr1	191731632	191732946	(57223476)	+	LTR12C	LTR/ERV1	3	1579	(0)	282509
5700	10.6	2.5	0.5	chr1	193224901	193225245	(55731177)	C	L1PB1	LINE/L1	(4)	6147	5793	284555
597	30.5	4.6	2.6	chr1	198806231	198806381	(50150041)	C	MIR	SINE/MIR	(40)	222	67	291705
733	20.2	4.1	1.6	chr1	199007676	199007866	(49948556)	+	LTR41	LTR/ERVL	573	768	(0)	291948
5561	9.6	2.6	0.4	chr1	199532935	199533695	(49422727)	+	THE1B-int	LTR/ERVL-MaLR	2	779	(801)	292637
366	10.8	5.8	1.5	chr1	199533692	199533757	(49422665)	+	THE1B	LTR/ERVL-MaLR	307	375	(0)	292637
18	0.0	4.3	0.0	chr1	199929746	199929768	(49026654)	+	(TC)n	Simple_repeat	1	24	(0)	293252
30	15.9	1.5	2.9	chr1	201023446	201023512	(47932910)	+	(GGC)n	Simple_repeat	1	68	(0)	295379
1500	16.6	8.6	1.8	chr1	202081763	202082045	(46874377)	+	AluJo	SINE/Alu	3	306	(6)	297227
295	11.9	28.8	1.2	chr1	202082049	202082133	(46874289)	+	MER39	LTR/ERV1	590	707	(0)	297228
326	24.4	14.8	0.6	chr1	202082134	202082306	(46874116)	C	L2a	LINE/L2	(376)	3043	2842	297220
221	23.4	7.2	0.0	chr1	202109104	202109180	(46847242)	C	MIR3	SINE/MIR	(16)	192	110	297302
991	25.4	10.8	0.0	chr1	202207612	202207843	(46748579)	+	MIR	SINE/MIR	3	262	(0)	297481
469	28.5	7.5	2.1	chr1	202223960	202224149	(46732273)	C	MIRb	SINE/MIR	(48)	220	20	297519
247	24.1	0.0	0.0	chr1	202236638	202236691	(46719731)	+	L2b	LINE/L2	3313	3366	(9)	297540
2148	14.1	4.2	0.7	chr1	202389949	202390362	(46566060)	+	L1MB8	LINE/L1	4650	5078	(1068)	297829
749	6.8	0.0	3.7	chr1	202692991	202693097	(46263325)	C	L1PB1	LINE/L1	(1)	6150	6048	298322
222	28.8	11.1	0.9	chr1	203142580	203142684	(45813738)	C	MIR3	SINE/MIR	(89)	119	3	299121
1158	19.5	7.9	8.1	chr1	203143090	203143446	(45812976)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	19	299122
207	18.6	2.3	0.0	chr1	203287568	203287610	(45668812)	+	L3b	LINE/CR1	4940	4983	(249)	299354
803	24.7	3.1	2.7	chr1	203455929	203456153	(45500269)	C	MER102b	DNA/hAT-Charlie	(107)	234	9	299632
761	27.8	3.4	7.1	chr1	203539898	203540350	(45416072)	C	MLT1J1	LTR/ERVL-MaLR	(8)	436	1	299789
247	34.0	2.8	3.5	chr1	204087532	204087712	(44868710)	+	MIR1_Amn	SINE/MIR	33	214	(16)	300955
286	27.0	0.9	5.0	chr1	204115353	204115473	(44840949)	+	MER5B	DNA/hAT-Charlie	40	155	(23)	301015
16	0.0	0.0	0.0	chr1	204115476	204115492	(44840930)	+	(T)n	Simple_repeat	1	17	(0)	301016
19	0.0	0.0	0.0	chr1	204115493	204115513	(44840909)	+	(A)n	Simple_repeat	1	21	(0)	301017
589	33.3	0.4	11.3	chr1	204115584	204115657	(44840765)	C	MIRb	SINE/MIR	(10)	258	202	301018
26	0.0	0.0	0.0	chr1	204115658	204115682	(44840740)	+	(T)n	Simple_repeat	1	25	(0)	301019
2079	11.5	1.4	0.0	chr1	204115688	204115965	(44840457)	C	AluSz	SINE/Alu	(30)	282	1	301020
4881	13.2	0.1	1.1	chr1	204169282	204170036	(44786386)	+	MER49	LTR/ERV1	1	748	(175)	301117
398	18.2	2.2	2.2	chr1	204170049	204170138	(44786284)	+	LOR1-int	LTR/ERV1	1997	2086	(5036)	301118
679	29.3	5.8	5.7	chr1	204170227	204170737	(44785685)	+	LOR1-int	LTR/ERV1	7169	7604	(516)	301118
10571	10.6	3.2	2.7	chr1	205155693	205156793	(43799629)	+	THE1C-int	LTR/ERVL-MaLR	496	1579	(1)	302894
3637	11.5	4.7	0.2	chr1	205498078	205498582	(43457840)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	303560
3075	13.0	6.6	9.8	chr1	205857564	205858176	(43098246)	+	LTR14B	LTR/ERVK	15	606	(2)	304214
2558	6.6	3.2	0.3	chr1	206616550	206616883	(42339539)	+	LTR14A	LTR/ERVK	1	344	(0)	305405
1533	12.8	7.2	0.0	chr1	206616884	206617126	(42339296)	+	L1MC3	LINE/L1	5928	6189	(144)	305403
3093	12.8	8.9	4.8	chr1	206778948	206779513	(42176909)	+	LTR14B	LTR/ERVK	17	608	(0)	305685
2502	24.5	2.1	7.8	chr1	206877994	206878711	(42077711)	+	LTR8	LTR/ERV1	16	691	(0)	305853
2870	24.4	6.0	6.1	chr1	206878714	206879746	(42076676)	+	L1MEg	LINE/L1	377	1408	(4676)	305852
17774	10.6	1.3	1.8	chr1	207745200	207747909	(41208513)	+	HUERS-P3b-int	LTR/ERV1	4713	7409	(9)	307095
4036	12.9	1.7	0.3	chr1	207747920	207748554	(41207868)	+	LTR9B	LTR/ERV1	1	644	(0)	307095
426	30.1	5.2	2.1	chr1	209861281	209861467	(39094955)	C	MIRb	SINE/MIR	(7)	261	69	310296
3586	8.9	10.4	4.2	chr1	211025540	211026105	(37930317)	+	LTR14B	LTR/ERVK	4	608	(0)	312012
2633	23.4	8.7	6.0	chr1	211026117	211027323	(37929099)	+	L1MD1	LINE/L1	7	1395	(5245)	312013
308	38.2	4.6	5.2	chr1	211138659	211138873	(37817549)	+	L2	LINE/L2	437	648	(2771)	312155
305	20.8	24.2	3.9	chr1	211695820	211695949	(37260473)	C	MIRb	SINE/MIR	(91)	171	7	313204
213	32.2	0.0	1.7	chr1	212711696	212711755	(36244667)	+	L2c	LINE/L2	3260	3318	(69)	315009
320	23.6	5.3	0.0	chr1	212711807	212711895	(36244527)	C	MIR	SINE/MIR	(125)	137	44	315014
6174	13.0	4.3	1.3	chr1	213211912	213213582	(35742840)	C	L1MC1	LINE/L1	(0)	6333	4621	315885
423	26.9	3.5	9.9	chr1	213337714	213337956	(35618466)	C	L2a	LINE/L2	(0)	3426	3200	316070
2284	11.1	0.3	0.0	chr1	213354936	213355233	(35601189)	+	AluSx	SINE/Alu	1	299	(13)	316106
2784	14.7	2.1	0.4	chr1	213873187	213873651	(35082771)	+	Tigger1	DNA/TcMar-Tigger	1946	2418	(0)	316868
7821	19.1	5.1	3.1	chr1	214714025	214715635	(34240787)	C	L1MD1	LINE/L1	(4705)	1928	19	318085
359	36.4	6.8	4.1	chr1	216144934	216145374	(32811048)	C	MLT1O	LTR/ERVL-MaLR	(54)	488	35	320010
273	31.9	1.7	3.4	chr1	221755823	221755939	(27200483)	+	Charlie10a	DNA/hAT-Charlie	5	119	(161)	328121
736	28.6	7.8	4.2	chr1	222590352	222590708	(26365714)	+	L3	LINE/CR1	3606	3976	(123)	329390
1209	22.7	18.2	1.3	chr1	222790857	222791311	(26165111)	C	LTR50	LTR/ERVL	(232)	563	15	329679
217	26.8	18.1	3.8	chr1	222791322	222791453	(26164969)	C	L2c	LINE/L2	(563)	2856	2702	329676
252	25.5	16.9	3.7	chr1	223049363	223049525	(25906897)	C	L2b	LINE/L2	(110)	3265	3077	330099
261	25.4	0.0	0.0	chr1	223300851	223300905	(25655517)	C	MIR3	SINE/MIR	(36)	172	118	330494
3442	19.9	5.8	1.6	chr1	223436633	223437420	(25519002)	C	MER21C	LTR/ERVL	(16)	922	10	330687
2308	10.4	4.2	1.9	chr1	223486813	223487184	(25469238)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	330761
24	23.9	0.0	0.0	chr1	223487196	223487252	(25469170)	+	G-rich	Low_complexity	1	57	(0)	330762
2234	11.4	0.7	0.0	chr1	223777761	223778050	(25178372)	+	AluSz6	SINE/Alu	1	292	(20)	331201
5024	23.5	10.3	2.9	chr1	224072485	224073639	(24882783)	+	HAL1	LINE/L1	1246	2483	(24)	331722
2403	16.4	7.0	0.0	chr1	224073649	224074044	(24882378)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	331727
2234	13.0	0.7	0.0	chr1	224170915	224171222	(24785200)	C	AluSq2	SINE/Alu	(1)	312	3	331944
1886	17.0	3.3	4.4	chr1	224171228	224171494	(24784928)	C	L1M4b	LINE/L1	(4630)	2237	1970	331945
2405	6.8	0.0	0.0	chr1	224171495	224171800	(24784622)	C	AluY	SINE/Alu	(0)	311	1	331946
35	2.5	2.4	0.0	chr1	224204729	224204769	(24751653)	+	(CAATATATTC)n	Simple_repeat	1	42	(0)	332037
8954	1.1	0.0	0.0	chr1	224339831	224340798	(24615624)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	332377
229	33.3	1.2	1.2	chr1	224542758	224542842	(24413580)	+	L2b	LINE/L2	2751	2835	(584)	332758
1369	27.4	5.9	10.2	chr1	224542843	224543606	(24412816)	+	MER21C	LTR/ERVL	3	821	(117)	332759
3619	11.1	4.2	0.0	chr1	224560402	224560908	(24395514)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	332787
1365	24.9	5.2	0.0	chr1	224561480	224561829	(24394593)	+	LTR16B1	LTR/ERVL	112	480	(0)	332788
23	21.6	0.0	0.0	chr1	224616317	224616327	(24340095)	+	(GCAGCG)n	Simple_repeat	1	21	(42)	332883
21	10.0	0.0	0.0	chr1	224616328	224616360	(24340062)	+	(GGC)n	Simple_repeat	1	33	(0)	332884
23	21.6	0.0	0.0	chr1	224616361	224616379	(24340043)	+	(GCAGCG)n	Simple_repeat	22	63	(0)	332883
386	27.4	0.9	0.0	chr1	224624002	224624114	(24332308)	C	L1ME3Cz	LINE/L1	(21)	976	863	332893
2048	11.9	7.6	1.9	chr1	224786984	224787342	(24169080)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	333159
8101	13.9	0.8	1.8	chr1	224840922	224842660	(24113762)	C	HERVH-int	LTR/ERV1	(1290)	5364	3492	333244
5946	21.4	8.9	6.5	chr1	224914000	224916480	(24039942)	+	LTR49-int	LTR/ERV1	2741	5288	(1043)	333357
9883	8.8	3.4	0.2	chr1	225176897	225178206	(23778216)	+	THE1B-int	LTR/ERVL-MaLR	1	1353	(227)	333647
3354	20.1	8.3	5.5	chr1	225280625	225281058	(23675364)	+	L1M4a2	LINE/L1	1634	2088	(568)	333745
24	13.0	0.0	0.0	chr1	225566241	225566283	(23390139)	+	(TTGT)n	Simple_repeat	1	43	(0)	334147
2242	11.4	11.1	3.8	chr1	225774782	225775174	(23181248)	+	MSTA	LTR/ERVL-MaLR	3	427	(1)	334561
3165	12.7	6.9	8.6	chr1	225800789	225801391	(23155031)	C	LTR14B	LTR/ERVK	(0)	608	17	334598
203	32.5	2.4	0.0	chr1	225825408	225825487	(23130935)	+	L3b	LINE/CR1	4798	4879	(353)	334644
602	14.7	0.0	0.0	chr1	226054791	226054885	(22901537)	+	MER53	DNA/hAT	1	95	(98)	335110
483	14.9	1.1	1.1	chr1	226054809	226054896	(22901526)	C	MER53	DNA/hAT	(9)	184	97	335111
1889	11.4	9.4	4.2	chr1	226272595	226273002	(22683420)	+	LTR14B	LTR/ERVK	7	608	(0)	335578
641	15.5	0.0	1.9	chr1	226273003	226273107	(22683315)	C	AluJb	SINE/Alu	(208)	104	2	335577
411	30.9	5.8	4.4	chr1	226449848	226450050	(22506372)	C	MLT1K	LTR/ERVL-MaLR	(241)	354	149	335928
44	0.0	0.0	0.0	chr1	226711406	226711443	(22244979)	+	(AG)n	Simple_repeat	1	38	(0)	336323
26	3.0	2.9	0.0	chr1	226711444	226711477	(22244945)	+	(TG)n	Simple_repeat	1	35	(0)	336324
2326	16.9	8.0	1.3	chr1	226822632	226823099	(22133323)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	4	336540
285	27.2	8.1	2.6	chr1	226823100	226823210	(22133212)	C	MamRep605	LTR?	(37)	812	695	336541
927	9.7	0.0	0.0	chr1	226823913	226824025	(22132397)	C	AluSc8	SINE/Alu	(61)	250	138	336543
385	28.1	7.2	1.0	chr1	226824026	226824219	(22132203)	C	LTR16B2	LTR/ERVL	(48)	414	208	336544
229	33.3	0.0	0.0	chr1	226824268	226824339	(22132083)	C	LTR16B2	LTR/ERVL	(388)	74	3	336544
3003	23.2	7.8	4.3	chr1	226971574	226972083	(21984339)	C	L1MEg	LINE/L1	(4673)	1742	1255	336763
2152	15.1	9.2	0.5	chr1	227091240	227091624	(21864798)	+	MSTB	LTR/ERVL-MaLR	1	422	(4)	336901
1650	8.1	3.0	0.0	chr1	227234805	227235027	(21721395)	+	MER30	DNA/hAT-Charlie	1	230	(0)	337136
953	9.1	0.0	0.8	chr1	227561181	227561302	(21395120)	+	5S	rRNA	1	121	(0)	337645
18	10.5	0.0	0.0	chr1	227561510	227561540	(21394882)	+	(CGGGG)n	Simple_repeat	1	31	(0)	337646
2224	18.6	3.2	2.1	chr1	227564047	227564512	(21391910)	C	MER57E3	LTR/ERV1	(16)	471	1	337651
5275	22.8	7.6	2.8	chr1	227579131	227580326	(21376096)	C	L1PA13	LINE/L1	(5527)	1258	1	337670
49718	5.6	0.6	0.5	chr1	227625558	227631559	(21324863)	C	HERV17-int	LTR/ERV1	(1078)	7548	1537	337721
2647	14.4	5.2	7.3	chr1	227719181	227719674	(21236748)	+	LTR2B	LTR/ERV1	1	483	(0)	337815
637	16.3	5.3	2.7	chr1	227719675	227719895	(21236527)	C	HERVIP10FH-int	LTR/ERV1	(4204)	898	672	337816
12	27.8	0.0	5.3	chr1	227737682	227737738	(21218684)	+	GA-rich	Low_complexity	1	57	(0)	337834
11799	8.7	0.9	0.2	chr1	227813273	227814789	(21141633)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	53	337922
2080	9.1	3.4	0.7	chr1	228100350	228100634	(20855788)	+	AluSq2	SINE/Alu	5	297	(16)	338288
2096	21.0	7.3	0.8	chr1	228190627	228191126	(20765296)	C	L1MB3	LINE/L1	(2)	6181	5647	338413
529	19.6	0.0	0.0	chr1	228199136	228199232	(20757190)	C	L1M4b	LINE/L1	(4711)	2156	2060	338431
2854	22.7	10.5	4.9	chr1	228199219	228200342	(20756080)	C	L1M4b	LINE/L1	(5012)	1855	661	338431
250	25.6	2.4	5.8	chr1	228227252	228227338	(20729084)	+	MIRb	SINE/MIR	123	206	(62)	338470
1576	18.8	6.6	2.3	chr1	228227544	228227892	(20728530)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	338471
1279	25.5	4.1	1.7	chr1	228242185	228242655	(20713767)	+	L1MEd	LINE/L1	1157	1639	(5447)	338488
30	33.8	0.0	0.0	chr1	228556762	228556856	(20399566)	+	(CA)n	Simple_repeat	1	95	(0)	338875
60	32.1	1.7	0.8	chr1	228556868	228557108	(20399314)	+	GA-rich	Low_complexity	1	245	(0)	338876
60	32.2	1.7	0.8	chr1	228608850	228609090	(20347332)	+	GA-rich	Low_complexity	1	245	(0)	338881
60	32.2	1.7	0.8	chr1	228611091	228611331	(20345091)	+	GA-rich	Low_complexity	1	245	(0)	338887
2327	9.1	0.0	0.0	chr1	228612191	228612497	(20343925)	+	AluY	SINE/Alu	1	307	(4)	338889
1125	0.0	0.0	0.0	chr1	228612507	228612627	(20343795)	C	5S	rRNA	(0)	121	1	338890
60	32.2	1.7	0.8	chr1	228613332	228613572	(20342850)	+	GA-rich	Low_complexity	1	245	(0)	338893
60	32.2	1.7	0.8	chr1	228615573	228615813	(20340609)	+	GA-rich	Low_complexity	1	245	(0)	338899
1125	0.0	0.0	0.0	chr1	228616989	228617109	(20339313)	C	5S	rRNA	(0)	121	1	338902
13	23.7	1.9	3.7	chr1	228617181	228617239	(20339183)	+	(GCCCGCG)n	Simple_repeat	1	57	(0)	338903
60	32.2	1.7	0.8	chr1	228617814	228618054	(20338368)	+	GA-rich	Low_complexity	1	245	(0)	338905
60	32.2	1.7	0.8	chr1	228620045	228620285	(20336137)	+	GA-rich	Low_complexity	1	245	(0)	338911
63	31.5	1.7	0.8	chr1	228622248	228622488	(20333934)	+	GA-rich	Low_complexity	1	245	(0)	338916
2327	9.1	0.0	0.0	chr1	228623349	228623655	(20332767)	+	AluY	SINE/Alu	1	307	(4)	338918
1125	0.0	0.0	0.0	chr1	228623665	228623785	(20332637)	C	5S	rRNA	(0)	121	1	338919
13	23.7	1.9	3.7	chr1	228623857	228623915	(20332507)	+	(GCCCGCG)n	Simple_repeat	1	57	(0)	338920
60	32.2	1.7	0.8	chr1	228624490	228624730	(20331692)	+	GA-rich	Low_complexity	1	245	(0)	338922
60	32.2	1.7	0.8	chr1	228626730	228626970	(20329452)	+	GA-rich	Low_complexity	1	245	(0)	338928
12	10.7	6.7	0.0	chr1	228627619	228627648	(20328774)	+	(GGCGGA)n	Simple_repeat	1	32	(0)	338929
2327	9.1	0.0	0.0	chr1	228627830	228628136	(20328286)	+	AluY	SINE/Alu	1	307	(4)	338930
13	23.7	1.9	3.7	chr1	228628338	228628396	(20328026)	+	(GCCCGCG)n	Simple_repeat	1	57	(0)	338932
60	32.2	1.7	0.8	chr1	228628971	228629211	(20327211)	+	GA-rich	Low_complexity	1	245	(0)	338934
60	32.2	1.7	0.8	chr1	228631213	228631453	(20324969)	+	GA-rich	Low_complexity	1	245	(0)	338940
1125	0.0	0.0	0.0	chr1	228632629	228632749	(20323673)	C	5S	rRNA	(0)	121	1	338943
13	23.7	1.9	3.7	chr1	228632821	228632879	(20323543)	+	(GCCCGCG)n	Simple_repeat	1	57	(0)	338944
48	27.7	0.0	0.0	chr1	228633320	228633442	(20322980)	+	(CA)n	Simple_repeat	1	123	(0)	338945
63	31.5	1.7	0.8	chr1	228633454	228633694	(20322728)	+	GA-rich	Low_complexity	1	245	(0)	338946
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
2327	9.1	0.0	0.0	chr1	228636778	228637084	(20319338)	+	AluY	SINE/Alu	1	307	(4)	338954
60	32.2	1.7	0.8	chr1	228637919	228638159	(20318263)	+	GA-rich	Low_complexity	1	245	(0)	338958
60	32.2	1.7	0.8	chr1	228640150	228640390	(20316032)	+	GA-rich	Low_complexity	1	245	(0)	338964
60	32.2	1.7	0.8	chr1	228642391	228642631	(20313791)	+	GA-rich	Low_complexity	1	245	(0)	338970
60	32.2	1.7	0.8	chr1	228644622	228644862	(20311560)	+	GA-rich	Low_complexity	1	245	(0)	338976
2327	9.1	0.0	0.0	chr1	228645722	228646028	(20310394)	+	AluY	SINE/Alu	1	307	(4)	338978
1091	28.9	8.6	7.2	chr1	228996157	228996692	(19959730)	+	MLT1G	LTR/ERVL-MaLR	2	587	(8)	339526
1235	15.8	3.6	6.0	chr1	229121724	229121932	(19834490)	+	MER44A	DNA/TcMar-Tigger	57	257	(82)	339728
2181	15.9	5.1	1.9	chr1	229121933	229122349	(19834073)	+	MSTB1	LTR/ERVL-MaLR	2	432	(0)	339729
4709	15.2	3.4	1.0	chr1	229195138	229196103	(19760319)	+	L1MB8	LINE/L1	5187	6178	(0)	339827
41	24.7	5.6	3.4	chr1	229271387	229271584	(19684838)	+	(GGCGCGG)n	Simple_repeat	1	209	(0)	339986
529	15.1	7.0	0.0	chr1	229344696	229344788	(19611634)	C	MLT1H2	LTR/ERVL-MaLR	(1)	488	389	340090
2377	15.7	3.0	1.0	chr1	229344852	229345268	(19611154)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	340091
221	32.5	0.9	5.0	chr1	229557306	229557425	(19398997)	+	L2c	LINE/L2	3272	3386	(1)	340496
366	19.7	0.0	0.0	chr1	229759077	229759137	(19197285)	C	MER45A	DNA/hAT-Tip100	(0)	178	118	340850
699	24.9	10.3	2.2	chr1	229759166	229759286	(19197136)	C	MLT2F	LTR/ERVL	(372)	291	147	340851
33	0.0	0.0	0.0	chr1	229759287	229759314	(19197108)	+	(TG)n	Simple_repeat	1	28	(0)	340852
699	24.9	10.3	2.2	chr1	229759315	229759459	(19196963)	C	MLT2F	LTR/ERVL	(517)	146	1	340851
1599	16.8	8.3	0.3	chr1	230088110	230088432	(18867990)	C	L1MB2	LINE/L1	(9)	6162	5812	341394
4824	14.1	6.2	1.8	chr1	230187340	230188107	(18768315)	C	LTR1E	LTR/ERV1	(0)	804	1	341521
396	15.7	5.7	0.0	chr1	230852361	230852443	(18103979)	+	L1MB3	LINE/L1	5953	6040	(143)	342511
592	16.4	0.0	4.1	chr1	230852444	230852564	(18103858)	+	L1MA7	LINE/L1	6171	6286	(5)	342512
24	6.8	0.0	0.0	chr1	231626638	231626668	(17329754)	+	(GT)n	Simple_repeat	1	31	(0)	343832
15	0.0	0.0	0.0	chr1	231626668	231626684	(17329738)	+	(GC)n	Simple_repeat	1	17	(0)	343833
11334	8.7	1.1	0.0	chr1	231685767	231687234	(17269188)	C	THE1A-int	LTR/ERVL-MaLR	(96)	1484	1	343922
2732	4.7	0.0	4.1	chr1	232597396	232597715	(16358707)	+	AluY	SINE/Alu	1	307	(4)	345133
348	31.0	3.3	3.3	chr1	232682181	232682360	(16274062)	C	MARNA	DNA/TcMar-Mariner	(41)	545	366	345254
4787	12.7	6.3	0.4	chr1	232773205	232773979	(16182443)	+	LTR1B	LTR/ERV1	1	824	(0)	345402
2291	16.9	2.6	1.9	chr1	232877594	232878015	(16078407)	+	MSTB1	LTR/ERVL-MaLR	4	428	(4)	345576
2701	8.0	0.8	0.3	chr1	232923080	232923432	(16032990)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	345644
1854	25.6	7.2	1.5	chr1	233610659	233611181	(15345241)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	1	346661
4590	7.0	0.0	4.1	chr1	233611186	233611797	(15344625)	C	LTR14C	LTR/ERVK	(0)	587	1	346662
217	36.2	6.2	2.6	chr1	233664309	233664464	(15291958)	C	L3	LINE/CR1	(351)	3748	3587	346731
273	23.8	7.0	1.2	chr1	233664520	233664600	(15291822)	C	Charlie4z	DNA/hAT-Charlie	(1)	166	81	346732
2332	16.2	3.0	2.3	chr1	234037052	234037480	(14918942)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	347271
1115	27.8	8.4	4.9	chr1	234037481	234037872	(14918550)	C	L2a	LINE/L2	(49)	3377	2963	347270
3594	10.4	4.2	2.3	chr1	234839709	234840227	(14116195)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	348523
257	37.9	2.5	0.7	chr1	234866731	234866884	(14089538)	+	LTR88c	LTR/Gypsy?	142	298	(564)	348568
2680	14.5	11.3	3.9	chr1	235589033	235589593	(13366829)	+	LTR18B	LTR/ERVL	1	608	(6)	350050
208	26.5	12.5	5.8	chr1	235992919	235993022	(12963400)	C	MIR3	SINE/MIR	(15)	193	82	350774
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
441	31.1	10.0	5.6	chr1	236452128	236452319	(12504103)	C	LTR78B	LTR/ERV1	(903)	393	193	351659
750	19.3	0.0	0.0	chr1	237445070	237445188	(11511234)	+	FLAM_A	SINE/Alu	4	122	(20)	353325
342	29.1	13.8	3.2	chr1	237864922	237865198	(11091224)	+	LTR79	LTR/ERVL	33	343	(184)	353892
560	31.5	0.7	0.7	chr1	237870578	237870724	(11085698)	C	MLT1G	LTR/ERVL-MaLR	(7)	584	438	353904
419	27.6	3.0	3.7	chr1	237870811	237870990	(11085432)	C	MLT1G	LTR/ERVL-MaLR	(308)	287	77	353904
4437	16.9	5.9	1.6	chr1	238746025	238746874	(10209548)	+	MER52-int	LTR/ERV1	1	888	(6203)	355119
510	33.3	10.1	5.4	chr1	239700906	239701387	(9255035)	C	L3	LINE/CR1	(482)	3617	3111	356531
12061	8.9	0.4	0.2	chr1	239979013	239980586	(8975836)	+	THE1B-int	LTR/ERVL-MaLR	4	1580	(0)	356941
529	30.0	15.9	1.4	chr1	240117734	240118171	(8838251)	C	L2a	LINE/L2	(0)	3426	2895	357178
1769	17.4	3.0	1.9	chr1	240118172	240118540	(8837882)	C	MER83C	LTR/ERV1	(0)	373	1	357179
4204	20.9	5.6	1.8	chr1	240225288	240226646	(8729776)	+	L1M4b	LINE/L1	1221	2922	(594)	357335
1913	17.6	0.3	0.3	chr1	240448861	240449156	(8507266)	+	AluJb	SINE/Alu	1	296	(16)	357643
466	34.9	6.4	1.4	chr1	240830140	240830360	(8126062)	+	LTR81A	LTR/Gypsy	668	900	(450)	358323
262	36.2	1.5	5.3	chr1	240830397	240830603	(8125819)	+	LTR81C	LTR/Gypsy	781	979	(174)	358325
373	18.3	10.9	0.0	chr1	241281919	241282000	(7674422)	+	Tigger2	DNA/TcMar-Tigger	2574	2665	(53)	359064
1779	15.4	0.7	2.2	chr1	241282013	241282324	(7674098)	C	L1PA16	LINE/L1	(29)	6137	5831	359065
8043	20.6	3.2	0.5	chr1	242043984	242045546	(6910876)	+	MSTA-int	LTR/ERVL-MaLR	1	1607	(44)	360400
231	35.8	4.5	4.5	chr1	244353577	244353731	(4602691)	C	L2c	LINE/L2	(178)	3209	3055	364040
2678	9.7	0.6	0.3	chr1	244365246	244365608	(4590814)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	364071
2482	15.0	7.1	0.2	chr1	244365609	244365672	(4590750)	C	LTR47A	LTR/ERVL	(387)	65	2	364070
1611	17.4	0.0	1.4	chr1	244461823	244462103	(4494319)	C	AluJr	SINE/Alu	(21)	291	15	364218
2218	13.2	4.8	5.5	chr1	244735240	244735398	(4221024)	+	LTR23	LTR/ERV1	283	434	(3)	364640
3982	9.6	3.0	1.1	chr1	244735453	244736010	(4220412)	+	MER61E	LTR/ERV1	1	569	(0)	364644
5342	11.3	4.9	1.2	chr1	244765456	244765830	(4190592)	C	L1M1	LINE/L1	(3000)	4565	4189	364715
2040	10.1	1.8	0.4	chr1	244765831	244766106	(4190316)	C	AluSc	SINE/Alu	(6)	303	24	364720
3940	26.5	9.7	11.0	chr1	244779902	244781181	(4175241)	+	L2a	LINE/L2	869	2188	(1231)	364747
6441	9.5	0.7	1.1	chr1	248104922	248105330	(851092)	C	L1PA8	LINE/L1	(0)	6172	5766	370085
3862	11.1	0.7	4.9	chr1	248105331	248105963	(850459)	C	LTR14B	LTR/ERVK	(0)	608	3	370086
35	29.2	0.9	1.8	chr10	84099	84211	(133713211)	+	(CA)n	Simple_repeat	1	114	(0)	371110
32	26.3	0.0	2.2	chr10	84383	84472	(133712950)	+	(CA)n	Simple_repeat	1	90	(0)	371111
4518	7.0	3.9	0.2	chr10	373466	374050	(133423372)	+	LTR14B	LTR/ERVK	1	608	(0)	371482
1630	17.3	3.3	0.0	chr10	961606	961923	(132835499)	C	MSTB1	LTR/ERVL-MaLR	(103)	329	1	372084
1094	18.0	3.2	0.0	chr10	1364519	1364729	(132432693)	+	MER2	DNA/TcMar-Tigger	1	218	(127)	372515
2258	17.9	6.7	2.6	chr10	1364739	1364871	(132432551)	+	Tigger1	DNA/TcMar-Tigger	29	162	(2256)	372516
2391	9.3	0.3	0.0	chr10	1364872	1365171	(132432251)	C	AluSx1	SINE/Alu	(11)	301	1	372517
4380	8.1	4.0	0.3	chr10	1414228	1414810	(132382612)	+	LTR14B	LTR/ERVK	4	608	(0)	372553
201	26.3	3.2	0.6	chr10	1414813	1415321	(132382101)	+	(GATG)n	Simple_repeat	1	522	(0)	372554
892	26.3	2.3	8.9	chr10	3313570	3313940	(130483482)	+	L1MD3	LINE/L1	7035	7380	(615)	374923
3109	18.3	13.6	7.1	chr10	3361206	3361983	(130435439)	+	THE1B-int	LTR/ERVL-MaLR	3	839	(812)	374989
1026	11.8	0.0	1.4	chr10	3361980	3362125	(130435297)	+	THE1B	LTR/ERVL-MaLR	221	364	(0)	374990
201	31.8	1.8	2.6	chr10	5492486	5492598	(128304824)	C	MIR1_Amn	SINE/MIR	(78)	152	41	377832
794	16.7	2.7	0.0	chr10	5534132	5534275	(128263147)	+	MER45A	DNA/hAT-Tip100	31	178	(0)	377882
1711	14.1	9.4	0.0	chr10	5691896	5692164	(128105258)	+	AluSz	SINE/Alu	1	297	(15)	378139
2252	10.6	0.3	1.0	chr10	5906963	5907264	(127890158)	C	AluSz	SINE/Alu	(12)	300	1	378540
865	21.3	0.6	1.7	chr10	5991569	5991740	(127805682)	C	MER45A	DNA/hAT-Tip100	(8)	170	1	378698
511	23.0	11.7	2.9	chr10	5991749	5992071	(127805351)	+	L1MEf	LINE/L1	1198	1751	(5286)	378699
890	23.6	3.2	1.4	chr10	7309921	7310135	(126487287)	C	MER20	DNA/hAT-Charlie	(0)	219	1	380814
3707	11.9	0.0	4.9	chr10	7377304	7377859	(126419563)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	380921
2332	11.4	0.0	0.0	chr10	7572772	7573077	(126224345)	C	AluSq	SINE/Alu	(7)	306	1	381236
1838	13.4	0.0	0.0	chr10	8733123	8733376	(125064046)	+	AluSq2	SINE/Alu	3	256	(57)	383253
1725	22.3	4.4	3.3	chr10	10656926	10657375	(123140047)	+	L1MB7	LINE/L1	5652	6106	(78)	385917
383	9.8	0.0	0.0	chr10	10657405	10657455	(123139967)	C	MADE1	DNA/TcMar-Mariner	(28)	52	2	385919
774	29.5	11.5	3.1	chr10	10789231	10789769	(123007653)	C	L1ME4a	LINE/L1	(195)	5929	5340	386108
809	32.2	7.6	3.4	chr10	10802852	10803568	(122993854)	+	L2a	LINE/L2	2412	3174	(252)	386122
2073	12.2	1.7	0.0	chr10	12127110	12127403	(121670019)	+	AluSz	SINE/Alu	1	299	(13)	388247
917	16.0	1.8	4.0	chr10	12127581	12127755	(121669667)	C	AluJo	SINE/Alu	(57)	255	85	388248
448	24.7	29.7	1.2	chr10	12127991	12128331	(121669091)	+	MLT1G3	LTR/ERVL-MaLR	1	450	(145)	388249
804	25.2	3.2	0.9	chr10	12930611	12930822	(120866600)	+	MER20	DNA/hAT-Charlie	1	217	(2)	389817
1906	15.2	0.3	1.3	chr10	12933455	12933757	(120863665)	C	AluSz6	SINE/Alu	(12)	300	1	389824
10617	15.1	3.9	2.1	chr10	12933758	12934804	(120862618)	C	L1MCa	LINE/L1	(2802)	3519	2456	389821
14	14.7	0.0	3.1	chr10	13100170	13100201	(120697221)	+	(GCC)n	Simple_repeat	1	32	(0)	390109
2648	21.6	9.3	0.3	chr10	14050443	14051124	(119746298)	+	MER21C	LTR/ERVL	7	855	(83)	391831
213	26.7	0.0	9.6	chr10	15293749	15293831	(118503591)	C	L2a	LINE/L2	(200)	3175	3101	393999
236	30.6	10.6	9.1	chr10	15293856	15294096	(118503326)	+	MLT1N2	LTR/ERVL-MaLR	72	316	(246)	394000
941	29.3	6.2	2.5	chr10	16365994	16366074	(117431348)	C	MLT1L	LTR/ERVL-MaLR	(93)	517	432	395668
616	21.6	0.9	0.0	chr10	16366075	16366185	(117431237)	+	MER81	DNA/hAT-Blackjack	3	114	(0)	395669
941	29.3	6.2	2.5	chr10	16366186	16366509	(117430913)	C	MLT1L	LTR/ERVL-MaLR	(179)	431	96	395668
446	17.5	1.2	0.0	chr10	16427766	16427845	(117369577)	C	MLT1J	LTR/ERVL-MaLR	(360)	152	72	395797
384	27.8	10.4	3.4	chr10	16427873	16428051	(117369371)	C	MIRc	SINE/MIR	(73)	195	3	395798
6480	18.5	1.0	0.1	chr10	16822215	16823330	(116974092)	+	MSTB-int	LTR/ERVL-MaLR	1	1126	(525)	396435
1772	14.2	0.7	5.1	chr10	17437174	17437469	(116359953)	C	AluJr	SINE/Alu	(27)	285	3	397377
61	0.0	0.0	0.0	chr10	17437611	17437665	(116359757)	+	(TTCC)n	Simple_repeat	1	55	(0)	397378
28	2.4	2.2	4.3	chr10	17437668	17437691	(116359731)	+	(TCTCTT)n	Simple_repeat	1	23	(0)	397379
38	4.7	0.0	0.0	chr10	17437692	17437736	(116359686)	+	(CCTTCCCTT)n	Simple_repeat	1	45	(0)	397380
413	29.9	0.0	2.1	chr10	17756636	17756775	(116040647)	C	MIRb	SINE/MIR	(131)	137	1	397972
2181	17.3	2.3	2.9	chr10	21040356	21040673	(112756749)	C	MSTB	LTR/ERVL-MaLR	(73)	353	41	402884
1896	12.0	1.4	2.8	chr10	21040674	21040686	(112756736)	C	L1PA15	LINE/L1	(0)	6165	6153	402886
2150	14.2	13.7	0.5	chr10	21040687	21041055	(112756367)	+	MSTA	LTR/ERVL-MaLR	4	428	(0)	402887
6592	24.1	8.0	5.2	chr10	22178522	22179814	(111617608)	+	L1ME1	LINE/L1	3622	4955	(1364)	404883
2334	13.4	7.0	2.2	chr10	22179815	22180225	(111617197)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	404888
891	21.7	13.0	2.5	chr10	22422045	22422318	(111375104)	+	ERV3-16A3_I-int	LTR/ERVL	953	1259	(3737)	405240
610	22.4	8.6	0.5	chr10	22555200	22555401	(111242021)	+	MIR	SINE/MIR	15	234	(28)	405437
3931	10.8	0.8	1.1	chr10	22691926	22692451	(111104971)	C	MER1A	DNA/hAT-Charlie	(1)	528	5	405638
11168	10.1	1.3	2.5	chr10	22908111	22909710	(110887712)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	405977
210	17.2	0.0	0.0	chr10	25076031	25076073	(108721349)	+	MIRc	SINE/MIR	118	162	(68)	409658
1185	11.8	0.0	2.4	chr10	25076191	25076359	(108721063)	C	AluSx	SINE/Alu	(11)	301	137	409659
1984	17.5	9.3	0.8	chr10	25823985	25824375	(107973047)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	410746
1973	9.5	2.3	18.2	chr10	26997607	26998017	(106799405)	+	LTR14A	LTR/ERVK	1	344	(0)	412681
20855	16.0	4.1	2.2	chr10	26998018	26999995	(106797427)	C	PRIMA4-int	LTR/ERV1	(5891)	2379	348	412674
16581	8.8	0.8	1.4	chr10	27899016	27903737	(105893685)	+	L1P3	LINE/L1	8	4743	(1718)	414163
2454	12.0	1.6	0.8	chr10	28908094	28908470	(104888952)	+	THE1D	LTR/ERVL-MaLR	1	380	(1)	415955
800	18.9	0.0	0.0	chr10	30313264	30313390	(103484032)	C	FLAM_A	SINE/Alu	(12)	130	4	418452
3837	10.2	0.2	0.9	chr10	30483529	30484061	(103313361)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	418790
667	31.2	12.2	4.1	chr10	30514933	30515543	(103281879)	+	ERV3-16A3_I-int	LTR/ERVL	693	1359	(3867)	418875
455	28.4	10.8	4.3	chr10	30541900	30542201	(103255221)	C	L3	LINE/CR1	(84)	4015	3692	418937
3431	13.2	3.6	0.0	chr10	30623396	30623903	(103173519)	+	MER1A	DNA/hAT-Charlie	3	529	(0)	419111
1951	17.1	7.3	0.3	chr10	30761335	30761669	(103035753)	C	MSTB	LTR/ERVL-MaLR	(63)	363	2	419328
872	22.6	6.4	5.6	chr10	30761670	30761831	(103035591)	+	MLT1A0	LTR/ERVL-MaLR	134	300	(65)	419327
2224	16.9	4.2	3.3	chr10	30816147	30816452	(102980970)	C	MSTB	LTR/ERVL-MaLR	(114)	312	1	419415
2345	9.0	0.3	0.3	chr10	31032772	31033070	(102764352)	C	AluSc	SINE/Alu	(10)	299	1	419724
11351	11.8	1.3	0.7	chr10	32097851	32099470	(101697952)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	421317
2215	35.3	7.0	2.3	chr10	32751007	32752236	(101045186)	C	ERVL-E-int	LTR/ERVL	(384)	5283	3991	422299
24771	6.6	0.6	0.8	chr10	32912177	32918355	(100879067)	+	L1PA5	LINE/L1	4	6153	(1)	422464
4365	17.9	5.1	4.0	chr10	33344443	33345333	(100452089)	C	MER54A	LTR/ERVL	(0)	901	1	423112
8304	7.7	10.6	0.1	chr10	33479736	33481029	(100316393)	C	LTR12C	LTR/ERV1	(145)	1434	3	423320
2157	25.4	8.9	8.3	chr10	34512095	34513278	(99284144)	C	L1MC5	LINE/L1	(734)	8570	7379	424832
5540	21.1	9.0	4.0	chr10	35438612	35440349	(98357073)	C	L1MDa	LINE/L1	(4409)	2224	146	426592
17036	18.6	4.3	2.5	chr10	37321404	37322828	(96474594)	+	HUERS-P3-int	LTR/ERV1	1	1477	(7442)	429390
4350	23.1	7.4	6.1	chr10	38158754	38159646	(95637776)	C	L1MC4a	LINE/L1	(10)	7872	6959	430624
1979	9.2	1.5	18.1	chr10	38159647	38160060	(95637362)	C	LTR14A	LTR/ERVK	(0)	344	1	430625
948	25.1	5.7	10.2	chr10	38385732	38386210	(95411212)	+	MLT1E	LTR/ERVL-MaLR	198	653	(0)	430944
180	35.6	0.0	0.0	chr10	43048648	43048706	(90748716)	+	L2a	LINE/L2	3342	3400	(26)	432896
297	23.6	7.7	7.3	chr10	43284777	43284928	(90512494)	+	MIR3	SINE/MIR	17	178	(52)	433184
918	22.8	2.7	0.0	chr10	44530246	44530495	(89266927)	+	L1M3	LINE/L1	2617	2873	(3267)	434932
236	6.1	0.0	0.0	chr10	44530511	44530543	(89266879)	C	MSTB	LTR/ERVL-MaLR	(321)	136	104	434931
1982	21.6	4.7	2.2	chr10	44530547	44531270	(89266152)	C	L1MB5	LINE/L1	(3794)	3048	1999	434929
495	29.8	13.1	3.5	chr10	44640020	44640561	(89156861)	+	L1ME3C	LINE/L1	5389	5994	(129)	435054
319	36.9	3.0	0.5	chr10	44640680	44640875	(89156547)	+	LTR33A	LTR/ERVL	307	507	(13)	435055
4834	18.9	4.5	5.0	chr10	44666038	44667867	(89129555)	C	LTR2752	LTR/ERV1	(0)	1263	8	435088
267	34.9	2.7	0.9	chr10	44858023	44858132	(88939290)	C	MIRc	SINE/MIR	(27)	241	130	435318
2664	6.8	1.2	0.0	chr10	45818019	45818358	(87979064)	C	LTR14A	LTR/ERVK	(0)	344	1	436653
1856	23.9	6.4	6.0	chr10	46059115	46059768	(87737654)	C	MER67B	LTR/ERV1	(0)	661	5	437112
2771	5.9	1.2	0.0	chr10	46094952	46095291	(87702131)	+	LTR14A	LTR/ERVK	1	344	(0)	437191
2694	5.8	0.3	0.0	chr10	46269530	46269872	(87527550)	+	LTR14A	LTR/ERVK	1	344	(0)	437419
590	27.6	0.6	1.6	chr10	46398650	46398833	(87398589)	+	L1ME2	LINE/L1	5748	5929	(235)	437609
13	24.3	0.0	2.4	chr10	46548360	46548400	(87249022)	+	(CTCC)n	Simple_repeat	1	41	(0)	437843
183	29.4	8.3	7.0	chr10	46561552	46561752	(87235670)	C	L2c	LINE/L2	(4)	3383	3180	437866
1042	27.0	10.0	1.4	chr10	46561825	46562252	(87235170)	+	MLT1J	LTR/ERVL-MaLR	4	472	(40)	437867
269	22.8	8.2	3.8	chr10	47194811	47194915	(86602507)	+	MIR1_Amn	SINE/MIR	64	173	(57)	438848
190	30.9	15.4	0.8	chr10	47255286	47255412	(86542010)	C	L3	LINE/CR1	(160)	3939	3791	438941
9766	12.0	5.7	1.4	chr10	47386884	47387712	(86409710)	C	THE1C-int	LTR/ERVL-MaLR	(722)	909	3	439117
2050	24.4	7.1	5.9	chr10	47395808	47396849	(86400573)	C	L1MB4	LINE/L1	(5245)	1362	206	439122
6125	14.8	1.9	0.6	chr10	47396850	47397838	(86399584)	C	LTR5B	LTR/ERVK	(0)	1002	1	439126
2111	9.9	0.3	17.9	chr10	48585059	48585476	(85211946)	+	LTR14A	LTR/ERVK	1	344	(0)	440751
391	30.6	6.6	4.7	chr10	48608276	48608467	(85188955)	+	MER91A	DNA/hAT-Tip100	1	196	(0)	440781
2153	14.1	6.1	2.0	chr10	49334742	49335133	(84462289)	C	MSTA	LTR/ERVL-MaLR	(19)	409	1	441761
413	23.4	0.2	7.1	chr10	49335185	49335315	(84462107)	+	MLT1H1	LTR/ERVL-MaLR	428	554	(1)	441759
259	20.9	14.8	0.0	chr10	49540540	49540625	(84256797)	C	LTR33	LTR/ERVL	(23)	492	392	441992
716	9.0	0.8	14.7	chr10	49540638	49540780	(84256642)	+	MLT1B	LTR/ERVL-MaLR	1	123	(267)	441993
7065	17.7	6.2	2.2	chr10	50036279	50038199	(83759223)	C	L1MB8	LINE/L1	(10)	6168	4162	442761
7303	17.3	6.2	2.2	chr10	50141175	50143096	(83654326)	+	L1MB8	LINE/L1	4162	6168	(10)	442923
300	32.7	6.4	15.2	chr10	51399478	51400097	(82397325)	+	MLT1N2	LTR/ERVL-MaLR	1	562	(0)	444791
3895	20.2	11.2	1.5	chr10	51515717	51516590	(82280832)	C	LTR28B	LTR/ERV1	(4)	970	1	444936
1753	18.1	9.5	1.0	chr10	52018915	52019309	(81778113)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	445719
2202	18.6	5.3	5.7	chr10	52019310	52019587	(81777835)	C	MER67D	LTR/ERV1	(252)	262	6	445718
11414	10.3	0.7	0.2	chr10	52580930	52582501	(81214921)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	446488
1254	22.5	11.3	6.2	chr10	52683283	52683718	(81113704)	C	LTR37B	LTR/ERV1	(0)	468	8	446634
2639	5.8	0.3	0.3	chr10	53882125	53882468	(79914954)	+	LTR14A	LTR/ERVK	1	344	(0)	448173
1485	9.9	0.0	0.5	chr10	53882470	53882662	(79914760)	C	AluSx	SINE/Alu	(120)	192	1	448172
3518	13.2	3.6	7.3	chr10	56370291	56370992	(77426430)	+	LTR76	LTR/ERV1	1	675	(0)	451363
413	11.7	0.0	0.0	chr10	56370996	56371055	(77426367)	+	AluJo	SINE/Alu	242	301	(11)	451364
2313	27.1	6.6	8.4	chr10	56371056	56371610	(77425812)	C	L1MB7	LINE/L1	(508)	5673	5037	451361
3571	11.4	1.0	0.0	chr10	58328051	58328541	(75468881)	C	MER1A	DNA/hAT-Charlie	(0)	529	34	453975
1901	17.9	2.2	0.3	chr10	58604756	58605113	(75192309)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	454394
1605	27.8	10.3	5.6	chr10	58605208	58605511	(75191911)	C	HAL1	LINE/L1	(16)	2491	2139	454395
1641	15.8	8.3	2.2	chr10	58850250	58850566	(74946856)	+	MER1B	DNA/hAT-Charlie	1	338	(1)	454690
6007	12.5	1.6	5.8	chr10	58850567	58850837	(74946585)	+	L1MC1	LINE/L1	5252	5486	(847)	454688
12	18.7	3.6	6.9	chr10	58980236	58980291	(74817131)	+	G-rich	Low_complexity	1	58	(0)	454881
1804	16.4	0.0	4.9	chr10	60730150	60730454	(73066968)	C	AluJo	SINE/Alu	(19)	293	4	457507
9381	8.0	14.1	1.2	chr10	61040491	61041861	(72755561)	+	LTR12C	LTR/ERV1	3	1579	(0)	457991
665	25.4	11.0	4.1	chr10	62273205	62273475	(71523947)	+	Charlie2a	DNA/hAT-Charlie	33	324	(2537)	459814
2192	10.9	0.7	0.0	chr10	62273476	62273758	(71523664)	+	AluSx1	SINE/Alu	1	285	(27)	459815
7107	17.4	4.7	1.9	chr10	62465387	62466613	(71330809)	+	LTR2752	LTR/ERV1	1	1263	(0)	460112
870	26.5	7.1	5.2	chr10	63642945	63643370	(70154052)	C	LTR16	LTR/ERVL	(0)	438	4	462154
197	32.8	1.5	0.0	chr10	63643412	63643478	(70153944)	C	MIRc	SINE/MIR	(122)	146	79	462155
375	34.4	6.2	1.6	chr10	63643494	63643676	(70153746)	C	MIRb	SINE/MIR	(68)	200	9	462156
1677	23.0	4.2	7.1	chr10	65570727	65571292	(68226130)	+	MER61-int	LTR/ERV1	1	549	(4668)	464914
13	8.5	4.0	0.0	chr10	67766721	67766745	(66030677)	+	(AAGA)n	Simple_repeat	1	26	(0)	467837
276	28.8	8.0	0.9	chr10	67766775	67766879	(66030543)	C	MLT1L	LTR/ERVL-MaLR	(153)	457	345	467835
2719	20.7	4.7	3.8	chr10	68867277	68868120	(64929302)	C	HERVK9-int	LTR/ERVK	(5237)	859	7	470317
3020	12.6	5.3	0.0	chr10	68868125	68868584	(64928838)	C	MER9a3	LTR/ERVK	(0)	512	27	470317
2187	28.6	5.8	5.6	chr10	69585879	69586807	(64210615)	+	ERV3-16A3_I-int	LTR/ERVL	4250	5180	(46)	471889
2322	16.1	6.3	2.0	chr10	70100922	70101028	(63696394)	C	L1MB5	LINE/L1	(38)	6136	6035	472751
4792	6.4	2.0	0.2	chr10	70101029	70101625	(63695797)	C	LTR14B	LTR/ERVK	(0)	608	1	472752
319	19.8	8.5	1.1	chr10	70412082	70412168	(63385254)	+	MLT1L	LTR/ERVL-MaLR	183	276	(334)	473417
2302	16.5	1.4	0.0	chr10	70648593	70648944	(63148478)	+	LTR18A	LTR/ERVL	1	357	(0)	473882
2466	18.1	5.6	0.7	chr10	70806424	70806867	(62990555)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	474137
2358	13.4	3.6	0.0	chr10	70910254	70910657	(62886765)	C	MSTB	LTR/ERVL-MaLR	(0)	426	8	474315
6158	23.9	4.9	2.1	chr10	71113492	71115574	(62681848)	+	L1MEc	LINE/L1	3513	5660	(692)	474662
2508	15.9	3.8	0.2	chr10	71115575	71115985	(62681437)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	474678
7335	10.9	7.1	2.4	chr10	71916717	71918318	(61879104)	C	PABL_A-int	LTR/ERV1	(804)	4211	2545	476190
254	34.2	7.2	3.0	chr10	71972821	71973052	(61824370)	+	L2c	LINE/L2	3117	3387	(0)	476271
20	12.6	2.9	0.0	chr10	73096009	73096043	(60701379)	+	GA-rich	Low_complexity	1	36	(0)	478601
410	31.9	11.7	1.3	chr10	74761172	74761328	(59036094)	C	MLT1J2	LTR/ERVL-MaLR	(170)	278	98	481767
2349	8.0	1.0	1.0	chr10	74761399	74761700	(59035722)	C	AluSp	SINE/Alu	(11)	302	1	481769
16240	9.5	4.0	2.7	chr10	74777652	74778494	(59018928)	+	PRIMA41-int	LTR/ERV1	1171	2029	(5727)	481801
3450	12.7	5.0	6.0	chr10	74778495	74779114	(59018308)	+	LTR18B	LTR/ERVL	1	614	(0)	481804
492	31.1	9.0	5.6	chr10	75591764	75592205	(58205217)	C	L2a	LINE/L2	(19)	3407	2941	483329
287	31.5	7.0	11.8	chr10	77306121	77306469	(56490953)	C	L2b	LINE/L2	(10)	3365	3035	485676
357	36.6	2.3	4.0	chr10	77306547	77306771	(56490651)	C	L2b	LINE/L2	(515)	2904	2684	485676
2231	11.5	6.2	0.5	chr10	77756243	77756393	(56041029)	+	L1M2	LINE/L1	5491	5641	(656)	486533
1603	14.4	11.1	3.4	chr10	77756391	77756832	(56040590)	+	L1M3f	LINE/L1	1648	2123	(4442)	486538
836	15.5	0.0	0.6	chr10	77963782	77963937	(55833485)	C	L1MB8	LINE/L1	(0)	6178	6024	486912
3432	12.3	0.4	2.2	chr10	77963941	77964439	(55832983)	+	Charlie3	DNA/hAT-Charlie	1	490	(2216)	486913
647	20.3	2.9	0.0	chr10	78145120	78145252	(55652170)	+	UCON19	Unknown	91	227	(151)	487263
386	28.5	30.9	9.0	chr10	78379214	78379459	(55417963)	C	MLT1L	LTR/ERVL-MaLR	(207)	403	105	487689
360	32.1	2.8	2.1	chr10	78567066	78567208	(55230214)	+	MIR3	SINE/MIR	36	179	(29)	488046
996	25.8	8.9	6.2	chr10	79319465	79319902	(54477520)	+	LTR16A1	LTR/ERVL	6	456	(0)	489416
241	35.3	4.4	3.5	chr10	79399515	79399644	(54397778)	C	MIR3	SINE/MIR	(61)	169	33	489543
1169	32.3	8.6	2.9	chr10	79885774	79886822	(53910600)	C	L2a	LINE/L2	(0)	3426	2295	490287
875	17.1	1.7	2.2	chr10	79886823	79887001	(53910421)	C	L1ME3A	LINE/L1	(0)	6173	5996	490288
497	24.8	4.6	1.6	chr10	79887009	79887135	(53910287)	+	L1ME3A	LINE/L1	5883	6013	(160)	490289
3061	24.6	3.8	0.9	chr10	79952544	79953188	(53844234)	C	L1PA17	LINE/L1	(6209)	664	1	490375
516	27.4	22.1	1.9	chr10	80160570	80161591	(53635831)	+	L2a	LINE/L2	2113	3426	(0)	490769
1883	15.3	1.4	0.0	chr10	80372382	80372669	(53424753)	+	AluJr	SINE/Alu	11	302	(10)	491103
649	23.5	2.3	3.4	chr10	80372706	80372881	(53424541)	C	MIRb	SINE/MIR	(20)	248	75	491104
369	27.0	10.3	6.5	chr10	80612360	80612573	(53184849)	C	MLT1H	LTR/ERVL-MaLR	(164)	385	163	491511
2361	15.6	6.6	0.0	chr10	80614129	80614525	(53182897)	C	MSTB	LTR/ERVL-MaLR	(0)	426	2	491514
220	36.8	9.8	9.4	chr10	80614526	80614650	(53182772)	+	L3	LINE/CR1	3852	3976	(123)	491513
2673	6.7	0.0	0.6	chr10	80709979	80710323	(53087099)	+	LTR14A	LTR/ERVK	1	343	(1)	491664
2114	13.8	0.3	0.0	chr10	80710324	80710621	(53086801)	C	AluSz	SINE/Alu	(9)	303	5	491665
11716	6.8	0.8	0.7	chr10	84168503	84170027	(49627395)	C	Harlequin-int	LTR/ERV1	(2018)	4878	3352	496428
21242	10.2	1.3	2.0	chr10	84409747	84412530	(49384892)	C	L1PA11	LINE/L1	(0)	6359	3606	496830
2600	6.2	1.4	0.3	chr10	84412531	84412870	(49384552)	C	LTR14A	LTR/ERVK	(0)	344	1	496831
11006	5.5	0.3	0.4	chr10	84527035	84528360	(49269062)	C	HERV17-int	LTR/ERV1	(4872)	3754	2430	496994
2014	11.9	1.8	17.6	chr10	84684448	84684856	(49112566)	+	LTR14B	LTR/ERVK	2	608	(0)	497209
510	32.2	11.3	1.7	chr10	86213701	86214219	(47583203)	+	L2c	LINE/L2	2345	2919	(500)	499151
4258	8.9	0.5	0.0	chr10	86598773	86599323	(47198099)	C	MER41A	LTR/ERV1	(0)	554	1	499832
1765	18.4	1.0	1.0	chr10	87872995	87873293	(45924129)	+	AluJo	SINE/Alu	1	299	(13)	501945
299	33.5	6.7	11.6	chr10	87873294	87873405	(45924017)	+	MIRb	SINE/MIR	65	180	(88)	501944
181	20.0	0.0	0.0	chr10	88258058	88258097	(45539325)	+	MIR3	SINE/MIR	96	135	(73)	502591
21	17.9	0.0	6.2	chr10	88301810	88301873	(45495549)	+	A-rich	Low_complexity	1	64	(0)	502655
396	29.3	4.3	2.5	chr10	88302007	88302167	(45495255)	C	MIR	SINE/MIR	(10)	252	89	502656
3768	22.9	3.1	3.5	chr10	89102428	89103024	(44694398)	C	L1M4	LINE/L1	(6922)	595	6	503862
482	31.9	2.8	8.4	chr10	89165222	89165488	(44631934)	+	MIRb	SINE/MIR	2	253	(15)	503972
5662	14.1	1.5	0.1	chr10	89299640	89300561	(44496861)	+	L1MA4A	LINE/L1	5363	6297	(6)	504172
428	30.5	5.8	2.8	chr10	89920105	89920286	(43877136)	+	MER5A	DNA/hAT-Charlie	2	189	(0)	505171
615	33.8	7.6	5.7	chr10	90438333	90438768	(43358654)	C	L2c	LINE/L2	(19)	3368	2924	505853
13	13.0	0.0	9.8	chr10	91220793	91220833	(42576589)	+	(CGG)n	Simple_repeat	1	41	(0)	506998
1333	15.0	0.0	10.5	chr10	91672984	91673250	(42124172)	C	AluJr	SINE/Alu	(69)	243	5	507679
517	15.5	0.0	0.0	chr10	91673253	91673336	(42124086)	C	MER5A	DNA/hAT-Charlie	(76)	113	30	507678
374	30.3	8.0	4.4	chr10	91708124	91708461	(42088961)	C	L1ME4a	LINE/L1	(6234)	869	519	507729
21485	12.1	5.0	1.6	chr10	91790419	91792006	(42005416)	+	L1MA3	LINE/L1	3046	4759	(2806)	507855
3524	7.4	5.1	0.2	chr10	92591083	92591570	(41205852)	+	LTR10D	LTR/ERV1	1	513	(0)	509465
575	33.5	7.7	4.9	chr10	92627377	92627987	(41169435)	C	HAL1	LINE/L1	(1351)	1156	495	509551
1108	27.4	10.4	1.8	chr10	93032607	93033278	(40764144)	C	L2a	LINE/L2	(1)	3425	2698	510341
2482	16.4	2.4	3.0	chr10	93157591	93157950	(40639472)	+	MSTB	LTR/ERVL-MaLR	1	369	(57)	510557
1782	18.5	12.9	0.6	chr10	94424741	94425105	(39372317)	C	MER54A	LTR/ERVL	(484)	417	1	512965
2205	10.6	0.0	0.4	chr10	94437318	94437591	(39359831)	C	AluY	SINE/Alu	(4)	307	35	512989
3856	21.8	5.0	2.5	chr10	94437592	94437991	(39359431)	C	L1ME3F	LINE/L1	(5907)	1610	1209	512986
1564	19.9	13.6	1.2	chr10	95456247	95456592	(38340830)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	514299
462	24.0	7.3	3.2	chr10	96312285	96312536	(37484886)	+	MLT1H1	LTR/ERVL-MaLR	41	341	(214)	515744
610	31.4	9.1	9.6	chr10	96425294	96427791	(37369631)	C	L1ME4b	LINE/L1	(1457)	4757	2271	515937
437	10.4	1.5	1.5	chr10	96602631	96602698	(37194724)	+	MER5A1	DNA/hAT-Charlie	1	68	(98)	516251
2706	5.9	0.6	0.0	chr10	96787069	96787405	(37010017)	+	LTR14A	LTR/ERVK	6	344	(0)	516682
271	20.2	2.4	2.4	chr10	96787406	96787446	(37009976)	C	FLAM_C	SINE/Alu	(260)	41	1	516683
18	25.0	4.0	3.8	chr10	96832884	96832959	(36964463)	+	(CG)n	Simple_repeat	1	79	(0)	516804
11	16.5	5.9	0.0	chr10	96832966	96832999	(36964423)	+	(GAGGTG)n	Simple_repeat	1	36	(0)	516805
2428	12.0	5.7	1.5	chr10	97219007	97219412	(36578010)	+	Tigger2a	DNA/TcMar-Tigger	11	434	(0)	517497
3298	10.9	2.7	0.2	chr10	97439300	97439775	(36357647)	+	MER1A	DNA/hAT-Charlie	42	529	(0)	517992
196	27.3	3.5	3.5	chr10	97705220	97705276	(36092146)	C	MIR	SINE/MIR	(192)	70	14	518540
1183	10.4	3.5	0.5	chr10	97705447	97705640	(36091782)	+	MLT2B4	LTR/ERVL	1	200	(356)	518548
53	0.0	0.0	0.0	chr10	97840249	97840293	(35957129)	+	(AG)n	Simple_repeat	1	45	(0)	518854
267	26.8	19.2	1.2	chr10	99395057	99395222	(34402200)	C	MIRb	SINE/MIR	(0)	268	66	521391
1894	11.8	1.2	0.0	chr10	100017953	100018206	(33779216)	C	AluSz	SINE/Alu	(16)	296	40	522536
316	28.4	14.4	0.0	chr10	100018283	100018377	(33779045)	+	MLT1K	LTR/ERVL-MaLR	145	255	(340)	522537
480	28.5	13.1	2.6	chr10	100018398	100018409	(33779013)	+	MLT1K	LTR/ERVL-MaLR	310	317	(278)	522537
2457	13.1	14.5	0.0	chr10	100018410	100018845	(33778577)	+	LTR54	LTR/ERV1	1	510	(0)	522538
499	36.7	9.3	2.6	chr10	100128756	100129099	(33668323)	C	L2	LINE/L2	(1904)	1515	1133	522802
1660	14.1	5.6	3.3	chr10	100129115	100129413	(33668009)	C	AluJo	SINE/Alu	(6)	306	1	522804
2395	9.9	0.0	0.0	chr10	100406027	100406330	(33391092)	+	AluSq2	SINE/Alu	1	304	(9)	523296
335	35.5	11.1	5.7	chr10	101013260	101013573	(32783849)	C	L2b	LINE/L2	(5)	3370	3038	524327
1735	11.5	13.5	0.0	chr10	101836266	101836535	(31960887)	C	AluSz6	SINE/Alu	(0)	312	1	525764
358	22.6	8.7	0.0	chr10	102837802	102837885	(30959537)	C	AluSc	SINE/Alu	(14)	295	204	527694
2229	9.2	0.0	3.8	chr10	102855749	102856062	(30941360)	C	AluSx1	SINE/Alu	(10)	302	1	527725
710	24.4	11.8	3.7	chr10	102856063	102856122	(30941300)	C	L2a	LINE/L2	(237)	3189	3126	527724
1655	24.9	3.9	8.1	chr10	102856126	102856270	(30941152)	+	Tigger13a	DNA/TcMar-Tigger	75	212	(559)	527726
675	17.4	0.0	6.5	chr10	103181212	103181349	(30616073)	+	FLAM_C	SINE/Alu	2	130	(13)	528359
2364	10.1	0.0	0.0	chr10	103847657	103847952	(29949470)	+	AluSz6	SINE/Alu	1	296	(16)	529762
22	16.6	2.1	0.0	chr10	103848195	103848241	(29949181)	+	(TCC)n	Simple_repeat	1	48	(0)	529763
1775	24.6	6.8	3.4	chr10	104139064	104139935	(29657487)	+	L1MCa	LINE/L1	1652	2613	(4409)	530223
3329	14.7	1.3	4.2	chr10	104496669	104497313	(29300109)	C	MER4D1	LTR/ERV1	(25)	875	279	530798
11327	9.6	0.9	1.1	chr10	110048332	110049605	(23747817)	+	THE1B-int	LTR/ERVL-MaLR	1	1281	(299)	538837
676	29.6	3.6	5.1	chr10	110454545	110454857	(23342565)	+	MLT1I	LTR/ERVL-MaLR	104	411	(0)	539547
314	19.8	11.3	16.5	chr10	110883531	110883718	(22913704)	C	L1MC5	LINE/L1	(4)	9300	9124	540319
15	16.9	6.2	2.0	chr10	110883802	110883849	(22913573)	+	(GTAT)n	Simple_repeat	1	51	(0)	540320
423	31.6	12.0	5.9	chr10	111457623	111458012	(22339410)	C	L2c	LINE/L2	(47)	3340	2924	541148
2230	13.2	8.2	0.3	chr10	111481213	111481539	(22315883)	C	LTR18A	LTR/ERVL	(0)	357	3	541187
3853	8.6	8.4	3.6	chr10	112226488	112227065	(21570357)	C	LTR14B	LTR/ERVK	(0)	608	1	542316
504	21.2	14.3	2.2	chr10	112249038	112249220	(21548202)	C	Charlie23a	DNA/hAT-Charlie	(116)	223	15	542347
254	34.3	3.7	0.9	chr10	112249267	112249372	(21548050)	C	MIR1_Amn	SINE/MIR	(102)	128	20	542348
4546	26.5	5.8	4.6	chr10	113213339	113214402	(20583020)	C	L1ME4a	LINE/L1	(3246)	2900	1823	543902
2378	17.9	1.6	4.1	chr10	113214403	113214844	(20582578)	+	MSTB1	LTR/ERVL-MaLR	2	432	(0)	543925
306	17.6	15.0	1.2	chr10	113287720	113287805	(20509617)	+	MER103C	DNA/hAT-Charlie	66	165	(132)	544061
21	15.9	0.0	0.0	chr10	114173880	114173921	(19623501)	+	(CTCGCC)n	Simple_repeat	1	42	(0)	545512
180	29.6	13.5	4.9	chr10	114254537	114254678	(19542744)	+	L2b	LINE/L2	3211	3366	(9)	545626
16	23.9	2.0	0.0	chr10	114357522	114357570	(19439852)	+	(TGCAATA)n	Simple_repeat	1	50	(0)	545806
2371	11.9	0.0	0.0	chr10	118142926	118143236	(15654186)	+	AluSz	SINE/Alu	2	312	(0)	551613
2094	22.3	4.5	1.5	chr10	118363761	118364292	(15433130)	C	MER74A	LTR/ERVL	(0)	558	10	551926
12189	8.2	0.9	0.8	chr10	119434219	119435796	(14361626)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	553888
4155	25.3	12.8	2.9	chr10	120195417	120197076	(13600346)	C	L1MA4A	LINE/L1	(5474)	1735	1	555274
1019	30.9	5.7	2.4	chr10	120432023	120432477	(13364945)	+	LTR16C	LTR/ERVL	19	489	(0)	555644
401	35.5	13.6	1.6	chr10	121050842	121051214	(12746208)	+	L2b	LINE/L2	2763	3191	(184)	556564
423	32.0	7.1	2.5	chr10	121242862	121243101	(12554321)	C	MamGypsy2-I	LTR/Gypsy	(2)	4164	3913	556850
2155	11.9	4.3	0.0	chr10	121389485	121389820	(12407602)	+	L1MB3	LINE/L1	5578	5928	(255)	557079
1980	14.8	4.0	3.4	chr10	121389821	121390171	(12407251)	+	MLT1A0	LTR/ERVL-MaLR	1	353	(12)	557080
382	30.7	4.8	0.7	chr10	121715779	121715919	(12081503)	+	L1ME3B	LINE/L1	6027	6173	(69)	557597
2358	9.7	6.2	1.9	chr10	121716004	121716372	(12081050)	C	MER4B	LTR/ERV1	(224)	386	1	557599
16	0.0	0.0	0.0	chr10	121734679	121734696	(12062726)	+	(A)n	Simple_repeat	1	18	(0)	557639
436	25.4	9.2	6.3	chr10	122054168	122054356	(11743066)	C	MamGypLTR3	LTR/Gypsy	(213)	681	487	558230
1446	21.8	14.7	0.5	chr10	122499069	122499493	(11297929)	+	MER45C	DNA/hAT-Tip100	458	953	(0)	558971
45	7.3	0.0	0.0	chr10	122647119	122647177	(11150245)	+	(CATT)n	Simple_repeat	1	59	(0)	559141
33	21.2	6.7	2.4	chr10	122679413	122679531	(11117891)	+	(TA)n	Simple_repeat	1	127	(0)	559173
3039	11.6	9.3	6.0	chr10	122763331	122763901	(11033521)	C	LTR14B	LTR/ERVK	(0)	608	17	559307
634	28.3	16.6	1.3	chr10	125521812	125522194	(8275228)	C	L2a	LINE/L2	(0)	3426	2974	563635
429	27.4	5.9	2.2	chr10	125534978	125535156	(8262266)	C	MER58A	DNA/hAT-Charlie	(0)	224	39	563655
2343	20.6	8.2	1.3	chr10	126120174	126120772	(7676650)	C	LTR48B	LTR/ERV1	(0)	644	1	564456
3576	12.2	1.9	0.8	chr10	126267241	126267762	(7529660)	C	MER1A	DNA/hAT-Charlie	(0)	529	2	564635
522	26.4	8.0	1.4	chr10	126372322	126372532	(7424890)	C	MIRc	SINE/MIR	(40)	228	3	564763
490	22.9	2.8	0.0	chr10	126377016	126377120	(7420302)	C	MER81	DNA/hAT-Blackjack	(2)	112	5	564769
623	32.3	0.4	7.6	chr10	126377121	126377210	(7420212)	C	MIR	SINE/MIR	(174)	88	12	564768
3386	7.9	4.9	1.1	chr10	126377222	126377654	(7419768)	C	MLT2A2	LTR/ERVL	(2)	451	2	564770
261	22.8	3.6	4.8	chr10	128292002	128292084	(5505338)	C	LTR85a	LTR/Gypsy?	(583)	119	38	567263
985	24.6	12.8	7.2	chr10	128363173	128363605	(5433817)	+	MLT1C	LTR/ERVL-MaLR	7	467	(0)	567340
1800	18.4	8.0	2.1	chr10	129178561	129178994	(4618428)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	568215
1778	24.5	6.0	8.2	chr10	129320282	129321033	(4476389)	C	L1ME1	LINE/L1	(11)	6168	5435	568383
489	25.2	9.3	2.0	chr10	129497475	129497624	(4299798)	C	L1MC4a	LINE/L1	(7)	7875	7714	568572
4207	22.2	5.3	1.2	chr10	129497626	129497652	(4299770)	C	L1MC4a	LINE/L1	(263)	7619	7598	568572
1809	19.6	1.9	0.0	chr10	129497653	129498009	(4299413)	+	MLT1A0	LTR/ERVL-MaLR	1	364	(1)	568573
194	22.4	0.0	0.0	chr10	130110276	130110324	(3687098)	+	L2b	LINE/L2	3309	3357	(18)	569114
414	19.6	7.8	0.9	chr10	130189445	130189552	(3607870)	C	MER115	DNA/hAT-Tip100	(69)	624	509	569235
307	32.8	2.4	0.2	chr10	131202001	131202147	(2595275)	C	L1ME4c	LINE/L1	(423)	407	284	570322
879	29.4	5.2	0.8	chr10	131824765	131825224	(1972198)	C	LTR53	LTR/ERVL	(0)	519	17	570982
850	24.4	15.9	0.0	chr10	131891119	131891541	(1905881)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	571044
1532	13.6	2.0	2.3	chr10	132007010	132007266	(1790156)	C	LTR8	LTR/ERV1	(0)	691	436	571204
2068	12.4	1.1	0.0	chr10	132007273	132007554	(1789868)	C	AluSz	SINE/Alu	(17)	295	11	571205
15	23.9	1.9	1.9	chr10	132458712	132458763	(1338659)	+	(CCCGCGC)n	Simple_repeat	1	53	(0)	571654
203	38.2	3.7	0.6	chr10	132936796	132936953	(860469)	+	L2	LINE/L2	2322	2484	(935)	572059
531	29.8	27.3	1.5	chr10	133342947	133343453	(453969)	C	L1M4a2	LINE/L1	(1604)	1052	393	572415
3831	10.2	2.0	6.3	chr10	133603540	133604156	(193266)	+	LTR14B	LTR/ERVK	16	605	(3)	572682
643	19.3	0.0	0.0	chr10	133604160	133604268	(193154)	+	HERVK14-int	LTR/ERVK	1	109	(5987)	572682
3631	10.7	2.7	6.4	chr10	133609355	133609963	(187459)	+	LTR14B	LTR/ERVK	17	602	(6)	572683
7795	7.3	0.5	1.4	chr10	133609964	133610941	(186481)	+	LTR5A	LTR/ERVK	1	969	(64)	572684
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
979	10.5	0.3	0.6	chr10	133761839	133765381	(32041)	+	BSR/Beta	Satellite	1	3530	(0)	572824
15	14.4	0.0	0.0	chr11	332563	332586	(134754036)	+	(A)n	Simple_repeat	1	24	(0)	573263
374	31.9	10.4	1.9	chr11	332587	333120	(134753502)	+	MLT1I-int	LTR/ERVL-MaLR	698	1349	(38)	573259
14	23.3	6.8	2.5	chr11	694230	694303	(134392319)	+	G-rich	Low_complexity	1	79	(0)	573780
1019	30.9	7.5	1.4	chr11	1360002	1360912	(133725710)	C	ERVL-E-int	LTR/ERVL	(1313)	4354	3468	574528
1230	29.8	7.1	0.6	chr11	1361084	1361559	(133725063)	C	ERVL-E-int	LTR/ERVL	(2280)	3387	2879	574528
315	34.3	26.3	2.1	chr11	2116462	2116797	(132969825)	C	L2	LINE/L2	(815)	2604	2187	575451
2084	25.7	5.0	8.1	chr11	2116853	2117235	(132969387)	C	L1MEf	LINE/L1	(4772)	1428	1083	575452
1226	25.6	1.6	10.2	chr11	8374338	8374747	(126711875)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	583910
181	20.5	0.0	0.0	chr11	9381125	9381163	(125705459)	C	L2b	LINE/L2	(12)	3375	3337	585662
2419	10.7	0.7	0.0	chr11	9392667	9392965	(125693657)	+	AluSz6	SINE/Alu	1	301	(11)	585697
232	30.2	3.0	1.0	chr11	9393075	9393171	(125693451)	C	L2	LINE/L2	(971)	2448	2350	585698
881	20.9	3.7	2.8	chr11	9974244	9974460	(125112162)	C	MER20	DNA/hAT-Charlie	(0)	219	1	586869
1586	24.5	9.9	1.4	chr11	10428801	10429242	(124657380)	C	LTR33	LTR/ERVL	(31)	484	1	587545
14	11.8	7.7	2.4	chr11	10898346	10898384	(124188238)	+	GA-rich	Low_complexity	1	42	(0)	588337
649	31.4	5.3	2.5	chr11	13062548	13062822	(122023800)	+	L2	LINE/L2	2	284	(3135)	591750
1287	26.9	10.8	0.3	chr11	15722906	15723278	(119363344)	C	LTR16A	LTR/ERVL	(0)	451	35	596004
406	34.3	5.8	4.1	chr11	15769592	15770186	(119316436)	+	MamGypLTR2b	LTR/Gypsy	258	920	(2)	596091
3158	11.3	3.5	0.2	chr11	16741557	16742027	(118344595)	+	MER1A	DNA/hAT-Charlie	1	510	(19)	597387
30298	19.9	2.3	3.8	chr11	17370374	17376380	(117710242)	+	HUERS-P3-int	LTR/ERV1	1	5912	(3007)	598650
662	29.2	9.4	4.1	chr11	18192933	18193275	(116893347)	C	LTR33	LTR/ERVL	(10)	505	143	600033
2363	16.0	6.3	0.0	chr11	19101159	19101559	(115985063)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	601611
582	29.9	5.9	2.1	chr11	19938314	19938638	(115147984)	C	MER102b	DNA/hAT-Charlie	(2)	339	2	603096
311	33.4	5.0	8.1	chr11	20272414	20272831	(114813791)	+	L2a	LINE/L2	3003	3426	(0)	603643
4299	7.0	3.8	0.3	chr11	24229484	24230070	(110856552)	+	LTR14B	LTR/ERVK	1	608	(0)	609383
445	33.8	3.1	0.6	chr11	24230072	24230229	(110856393)	C	LTR16C	LTR/ERVL	(302)	187	26	609384
3303	14.9	1.3	4.4	chr11	27809098	27809524	(107277098)	C	MER1A	DNA/hAT-Charlie	(0)	529	98	614565
2118	15.1	0.0	0.3	chr11	27809525	27809835	(107276787)	+	AluSz6	SINE/Alu	1	310	(2)	614566
21681	7.0	0.4	0.4	chr11	28157125	28159885	(106926737)	+	HERVL-int	LTR/ERVL	2893	5654	(0)	615135
43	2.3	2.2	0.0	chr11	30584342	30584386	(104502236)	+	(AC)n	Simple_repeat	1	46	(0)	618700
536	24.8	4.7	5.7	chr11	31186717	31187030	(103899592)	+	LTR16D	LTR/ERVL	259	651	(0)	619607
425	16.2	12.1	0.0	chr11	31187149	31187228	(103899394)	+	L2a	LINE/L2	3334	3424	(2)	619608
758	29.1	11.2	4.3	chr11	31754071	31754587	(103332035)	+	L2a	LINE/L2	2638	3192	(234)	620390
2180	11.9	5.5	7.5	chr11	32607766	32608137	(102478485)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	621945
11957	8.7	4.5	0.6	chr11	32608138	32609655	(102476967)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	621945
3981	9.7	2.7	3.0	chr11	33045670	33046263	(102040359)	C	LTR14B	LTR/ERVK	(0)	608	17	622707
27	15.6	0.0	4.8	chr11	36165980	36166042	(98920580)	+	(TCCT)n	Simple_repeat	1	63	(0)	627977
406	20.0	1.1	4.3	chr11	36186816	36186909	(98899713)	+	L1ME2	LINE/L1	6071	6161	(3)	628003
373	29.7	5.0	5.6	chr11	36244867	36245315	(98841307)	C	MLT1J	LTR/ERVL-MaLR	(0)	610	104	628110
251	23.2	0.0	1.8	chr11	36245277	36245333	(98841289)	C	LTR67B	LTR/ERVL	(499)	121	66	628111
8779	17.6	2.7	1.3	chr11	36580785	36582412	(98504210)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1	628634
1117	25.2	3.9	3.2	chr11	37393802	37394259	(97692363)	C	L1M4a1	LINE/L1	(3)	2653	2167	629806
3314	15.2	2.1	10.1	chr11	37394377	37395099	(97691523)	C	LTR76	LTR/ERV1	(11)	664	1	629808
1558	17.7	3.4	0.0	chr11	37748198	37748514	(97338108)	+	L1MA3	LINE/L1	4103	4430	(3135)	630290
1914	12.6	0.9	17.4	chr11	37748521	37748933	(97337689)	C	LTR14B	LTR/ERVK	(0)	608	1	630291
4207	8.6	3.8	0.3	chr11	41164691	41165274	(93921348)	+	LTR14B	LTR/ERVK	4	608	(0)	635007
6021	16.2	3.0	4.8	chr11	41165275	41165335	(93921287)	C	Tigger3b	DNA/TcMar-Tigger	(1165)	66	12	635002
3133	10.2	8.0	0.2	chr11	43784348	43784498	(91302124)	C	LTR2C	LTR/ERV1	(310)	191	2	638996
2161	21.1	12.9	1.1	chr11	43784499	43785206	(91301416)	C	HERVE-int	LTR/ERV1	(2)	7811	7020	638996
537	27.2	14.2	6.0	chr11	43940659	43940865	(91145757)	+	L2a	LINE/L2	2883	3107	(319)	639230
719	23.7	3.0	8.6	chr11	43940901	43941145	(91145477)	+	MIR	SINE/MIR	29	259	(3)	639237
2572	15.5	3.4	0.7	chr11	45465663	45466098	(89620524)	+	MER83	LTR/ERV1	1	448	(0)	642163
618	13.2	10.1	0.9	chr11	45815639	45815767	(89270855)	C	MSTA1	LTR/ERVL-MaLR	(281)	147	1	642830
16	21.7	0.0	0.0	chr11	46121236	46121267	(88965355)	+	G-rich	Low_complexity	1	32	(0)	643315
13	8.9	0.0	3.9	chr11	46121400	46121425	(88965197)	+	(CAG)n	Simple_repeat	1	26	(0)	643316
21	25.1	4.2	3.0	chr11	46121485	46121519	(88965103)	+	(CGCCCG)n	Simple_repeat	1	94	(0)	643317
26	7.9	7.3	1.7	chr11	46121520	46121574	(88965048)	+	(CCG)n	Simple_repeat	1	59	(0)	643318
3604	10.6	8.2	3.0	chr11	47875605	47876570	(87210052)	C	MER11A	LTR/ERVK	(89)	1147	1	646961
2922	13.9	5.4	9.4	chr11	55576053	55576655	(79509967)	C	LTR14B	LTR/ERVK	(0)	608	32	651126
1837	19.4	1.9	4.3	chr11	57298974	57299248	(77787374)	+	MLT1A0	LTR/ERVL-MaLR	94	363	(2)	653428
669	23.0	5.2	0.0	chr11	57299293	57299457	(77787165)	+	MLT1J2	LTR/ERVL-MaLR	244	417	(31)	653430
17	15.6	0.0	0.0	chr11	61610370	61610398	(73476224)	+	(AC)n	Simple_repeat	1	29	(0)	660498
542	28.6	7.9	1.2	chr11	62605377	62605542	(72481080)	+	MamRep38	DNA/hAT	103	280	(15)	662391
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
12	28.9	0.0	3.7	chr11	63614513	63614566	(71472056)	+	(CCCGGC)n	Simple_repeat	1	54	(0)	664007
1975	17.2	7.1	0.5	chr11	63921887	63922254	(71164368)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	664651
893	21.9	3.8	2.4	chr11	65775063	65775272	(69311350)	+	L1M5	LINE/L1	5579	5791	(403)	668161
47	0.0	0.0	0.0	chr11	65938566	65938605	(69148017)	+	(AC)n	Simple_repeat	1	40	(0)	668485
688	3.9	0.0	0.0	chr11	65938748	65938825	(69147797)	C	AluSz	SINE/Alu	(234)	78	1	668486
323	21.7	11.7	2.8	chr11	65938828	65938936	(69147686)	+	LTR78	LTR/ERV1	1071	1190	(114)	668487
309	31.8	12.5	0.0	chr11	66328573	66328698	(68757924)	C	L2a	LINE/L2	(2)	3424	3281	669254
2206	17.0	0.0	0.3	chr11	67757165	67757507	(67329115)	+	LTR1A1	LTR/ERV1	1	342	(457)	672192
381	29.1	3.6	5.5	chr11	68256181	68256380	(66830242)	C	L1MC5a	LINE/L1	(3)	2774	2579	673083
794	23.9	5.3	2.7	chr11	69245438	69245772	(65840850)	C	L2a	LINE/L2	(184)	3242	2902	674773
465	20.3	5.5	7.4	chr11	69439573	69439721	(65646901)	+	MLT1C	LTR/ERVL-MaLR	65	210	(257)	675096
870	25.7	1.9	4.8	chr11	69439844	69440113	(65646509)	+	MLT1C	LTR/ERVL-MaLR	191	452	(15)	675096
213	32.1	2.4	0.0	chr11	69455771	69455851	(65630771)	+	MIRb	SINE/MIR	35	117	(151)	675126
669	24.2	0.6	0.0	chr11	69455852	69456008	(65630614)	+	MER5A1	DNA/hAT-Charlie	2	159	(7)	675127
184	24.1	2.5	10.8	chr11	69456018	69456092	(65630530)	+	MIRb	SINE/MIR	106	187	(21)	675126
442	25.3	3.7	3.7	chr11	70191444	70191607	(64895015)	C	Charlie18a	DNA/hAT-Charlie	(15)	327	164	676403
1170	14.5	2.4	2.0	chr11	70449285	70449510	(64637112)	+	L1MB5	LINE/L1	5935	6142	(32)	676872
34	3.0	0.0	0.0	chr11	70449729	70449762	(64636860)	+	(TG)n	Simple_repeat	1	34	(0)	676873
253	32.3	7.1	7.6	chr11	71934227	71934397	(63152225)	C	L2c	LINE/L2	(35)	3352	3183	679004
15	0.0	4.5	0.0	chr11	71934503	71934524	(63152098)	+	(GTTT)n	Simple_repeat	1	23	(0)	679005
70	0.0	0.0	0.0	chr11	73142812	73142871	(61943751)	+	(GT)n	Simple_repeat	1	60	(0)	681263
3859	9.7	2.3	6.7	chr11	73938890	73939521	(61147101)	C	LTR14B	LTR/ERVK	(0)	608	5	683082
21322	9.7	1.9	0.2	chr11	73943577	73946851	(61139771)	C	HERVK14-int	LTR/ERVK	(2732)	3364	1	683083
3503	12.4	1.0	5.8	chr11	73946852	73947474	(61139148)	C	LTR14B	LTR/ERVK	(0)	608	16	683083
264	31.7	11.7	2.8	chr11	75160281	75160489	(59926133)	+	MIRb	SINE/MIR	18	241	(27)	685446
332	28.6	15.1	4.7	chr11	76149931	76150231	(58936391)	C	L2a	LINE/L2	(1407)	2012	1675	687414
926	22.8	0.0	0.0	chr11	76227418	76227584	(58859038)	+	AluJb	SINE/Alu	138	304	(8)	687566
741	24.3	8.6	1.8	chr11	76227630	76227855	(58858767)	+	L2a	LINE/L2	3184	3426	(0)	687565
4447	14.1	2.8	1.8	chr11	76605467	76606173	(58480449)	+	MER50	LTR/ERV1	1	714	(20)	688317
520	29.2	15.1	10.7	chr11	76606181	76606813	(58479809)	+	L2a	LINE/L2	2025	2776	(643)	688318
378	31.5	7.7	5.4	chr11	76823811	76824040	(58262582)	+	MIRc	SINE/MIR	7	235	(27)	688741
329	30.6	16.8	2.6	chr11	76824101	76824394	(58262228)	C	L2b	LINE/L2	(2)	3373	3020	688742
288	29.3	7.2	5.7	chr11	77197188	77197310	(57889312)	+	L2c	LINE/L2	3261	3385	(2)	689424
4739	25.5	5.8	4.4	chr11	77789034	77790099	(57296523)	+	L1M2	LINE/L1	822	1921	(5645)	690603
14	16.4	2.9	0.0	chr11	77815068	77815101	(57271521)	+	(GGAAGT)n	Simple_repeat	1	35	(0)	690653
2834	14.0	0.5	0.5	chr11	77833226	77833635	(57252987)	C	MER1A	DNA/hAT-Charlie	(119)	410	1	690689
1998	18.1	2.8	7.2	chr11	78454243	78454624	(56631998)	+	MSTB	LTR/ERVL-MaLR	1	391	(35)	692049
288	30.4	2.2	3.6	chr11	79308629	79308768	(55777854)	C	MIR3	SINE/MIR	(62)	146	9	693663
429	29.6	5.9	1.2	chr11	79308764	79308924	(55777698)	+	MIRc	SINE/MIR	73	241	(27)	693664
598	23.4	2.0	4.0	chr11	79529052	79529202	(55557420)	C	Zaphod3	DNA/hAT-Tip100	(2449)	174	27	694135
47	26.8	0.8	0.0	chr11	79532129	79532257	(55554365)	+	(TGTG)n	Simple_repeat	1	130	(0)	694140
220	24.4	0.0	0.0	chr11	79932622	79932666	(55153956)	+	MIR	SINE/MIR	130	174	(88)	694873
308	36.8	4.3	0.0	chr11	79932698	79932830	(55153792)	C	MIR3	SINE/MIR	(67)	141	3	694874
247	25.4	8.1	0.0	chr11	83104795	83104908	(51981714)	C	L1ME3B	LINE/L1	(0)	6173	6050	700045
542	10.8	2.4	0.0	chr11	83104911	83104993	(51981629)	+	LSU-rRNA_Hsa	rRNA	4950	5034	(1)	700046
1993	24.7	10.9	3.0	chr11	83105027	83106477	(51980145)	C	L1ME3B	LINE/L1	(176)	6066	4475	700045
1273	24.0	14.8	1.3	chr11	86503261	86503649	(48582973)	+	LTR16A	LTR/ERVL	1	451	(0)	705671
2490	14.0	4.2	1.4	chr11	87176066	87176485	(47910137)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	706753
4240	6.7	4.1	0.5	chr11	90455348	90455930	(44630692)	+	LTR14B	LTR/ERVK	4	608	(0)	711472
9430	10.8	3.3	1.9	chr11	90455931	90456410	(44630212)	+	L1PA16	LINE/L1	4802	5278	(868)	711471
521	23.4	0.8	0.0	chr11	91517874	91517997	(43568625)	C	MER74A	LTR/ERVL	(137)	421	297	712863
1635	24.0	4.2	7.2	chr11	92402762	92402942	(42683680)	+	L1MCb	LINE/L1	1546	1708	(5043)	714109
592	29.4	0.8	3.5	chr11	92463328	92463584	(42623038)	+	MIR	SINE/MIR	1	250	(12)	714195
248	31.4	4.2	2.1	chr11	92463601	92463740	(42622882)	C	MER5A	DNA/hAT-Charlie	(23)	166	24	714196
2121	8.1	8.0	2.8	chr11	93571485	93571767	(41514855)	+	AluSc8	SINE/Alu	1	299	(12)	715781
192	35.4	6.3	6.3	chr11	93571768	93571781	(41514841)	C	L2b	LINE/L2	(224)	3202	3189	715780
451	30.1	7.0	4.0	chr11	93571856	93572132	(41514490)	C	L2b	LINE/L2	(411)	3008	2723	715780
3664	18.7	8.6	5.0	chr11	93993736	93994220	(41092402)	+	LOR1-int	LTR/ERV1	938	1779	(7)	716531
271	17.6	7.3	0.3	chr11	94090980	94091064	(40995558)	+	MamGypLTR1d	LTR/Gypsy	696	796	(17)	716672
977	30.9	7.0	7.2	chr11	94281592	94282034	(40804588)	C	MLT1J1	LTR/ERVL-MaLR	(2)	442	1	716911
18	7.6	0.0	0.0	chr11	94543836	94543863	(40542759)	+	(CTCC)n	Simple_repeat	1	28	(0)	717311
2659	13.6	6.9	3.2	chr11	94826368	94826801	(40259821)	C	MSTB2	LTR/ERVL-MaLR	(2)	455	5	717727
483	30.9	6.4	7.1	chr11	94826802	94826838	(40259784)	C	L3	LINE/CR1	(275)	3824	3789	717725
2272	15.9	6.4	1.5	chr11	96434955	96435357	(38651265)	C	MSTB	LTR/ERVL-MaLR	(2)	424	1	720113
5341	15.1	3.9	1.5	chr11	96435358	96436442	(38650180)	C	L1MA8	LINE/L1	(493)	5798	4700	720112
881	34.5	1.2	1.0	chr11	96494427	96494836	(38591786)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	1	720190
39856	12.7	1.3	0.8	chr11	96500352	96506568	(38580054)	+	LTR46-int	LTR/ERV1	658	8177	(449)	720202
4389	6.0	4.3	3.0	chr11	98733288	98733887	(36352735)	+	LTR14B	LTR/ERVK	1	608	(0)	722895
2010	14.0	3.2	3.3	chr11	98733888	98733989	(36352633)	+	LTR28	LTR/ERV1	255	342	(678)	722894
226	28.6	3.1	0.0	chr11	102864419	102864481	(32222141)	C	MIRc	SINE/MIR	(202)	66	2	728573
2131	18.8	5.2	0.2	chr11	104043551	104043955	(31042667)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	730279
2731	12.2	4.2	2.6	chr11	106230092	106230586	(28856036)	+	LTR10B2	LTR/ERV1	1	503	(0)	733283
844	32.8	10.4	4.3	chr11	107756132	107757123	(27329499)	C	L1MEh	LINE/L1	(1169)	1066	8	735438
12	29.8	1.4	5.3	chr11	108872813	108872886	(26213736)	+	(TTCCCT)n	Simple_repeat	1	75	(0)	737520
235	37.9	8.7	5.2	chr11	109173531	109173839	(25912783)	C	L2b	LINE/L2	(1)	3374	3054	737985
237	29.0	13.4	4.4	chr11	112523247	112523517	(22563105)	+	L3	LINE/CR1	3668	3966	(133)	743259
363	31.9	5.2	2.1	chr11	113488859	113489044	(21597578)	+	MLT1M	LTR/ERVL-MaLR	229	420	(252)	744626
8570	12.0	1.4	0.4	chr11	113619100	113620387	(21466235)	+	HSMAR2	DNA/TcMar-Mariner	1	1301	(1)	744882
13	16.7	4.8	2.3	chr11	113687686	113687727	(21398895)	+	GA-rich	Low_complexity	1	44	(0)	744991
12	12.1	0.0	11.1	chr11	113687945	113687989	(21398633)	+	(CCTCTC)n	Simple_repeat	1	45	(0)	744992
484	33.3	4.0	6.0	chr11	116061129	116061380	(19025242)	+	MIRc	SINE/MIR	19	265	(3)	748633
211	29.4	3.2	2.1	chr11	117866431	117866524	(17220098)	C	Tigger19a	DNA/TcMar-Tigger	(63)	260	166	751878
3040	12.4	1.6	0.4	chr11	118498569	118499047	(16587575)	C	L1MC1	LINE/L1	(17)	6316	5832	753017
865	26.3	4.5	12.7	chr11	118700360	118700777	(16385845)	+	MLT1H	LTR/ERVL-MaLR	103	491	(58)	753382
1948	15.9	0.0	0.7	chr11	118700778	118701099	(16385523)	C	AluJb	SINE/Alu	(0)	312	2	753384
489	26.4	8.9	7.8	chr11	119606569	119607106	(15479516)	C	LTR48B	LTR/ERV1	(11)	633	10	755169
20	25.3	0.0	0.0	chr11	120325238	120325300	(14761322)	+	(CCTCCG)n	Simple_repeat	1	63	(0)	756368
1752	11.4	11.7	4.8	chr11	121236524	121236926	(13849696)	+	LTR14B	LTR/ERVK	3	607	(1)	757816
5090	6.5	1.1	0.4	chr11	121236928	121237620	(13849002)	+	HERVK14-int	LTR/ERVK	1	698	(5398)	757816
1080	24.1	11.5	3.7	chr11	130587065	130587391	(4499231)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	240	772136
312	5.4	0.0	0.0	chr11	130587401	130587437	(4499185)	C	MLT1H2	LTR/ERVL-MaLR	(15)	490	454	772137
2465	27.3	4.6	3.0	chr11	130587438	130588330	(4498292)	C	ERV3-16A3_I-int	LTR/ERVL	(1903)	3323	2573	772138
804	28.1	15.5	1.4	chr11	133259824	133260558	(1826064)	C	L2a	LINE/L2	(0)	3426	2565	775697
2316	17.6	2.9	3.5	chr12	988484	988943	(132286366)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	779864
2359	11.4	8.0	0.8	chr12	1198588	1198967	(132076342)	C	MSTA	LTR/ERVL-MaLR	(0)	428	19	780281
625	13.1	2.2	0.2	chr12	1198947	1199059	(132076250)	C	MSTA	LTR/ERVL-MaLR	(242)	133	11	780281
649	10.8	2.2	0.2	chr12	1199034	1199146	(132076163)	C	MSTA	LTR/ERVL-MaLR	(242)	133	11	780281
646	10.8	2.2	0.2	chr12	1199121	1199233	(132076076)	C	MSTA	LTR/ERVL-MaLR	(242)	133	11	780281
764	11.0	1.4	0.4	chr12	1199208	1199333	(132075976)	C	MSTA	LTR/ERVL-MaLR	(242)	133	1	780281
17	17.9	2.7	7.9	chr12	1594790	1594863	(131680446)	+	(GCGCCC)n	Simple_repeat	1	76	(0)	780921
350	26.1	12.7	2.1	chr12	2081909	2082049	(131193260)	C	MIR	SINE/MIR	(0)	262	105	781668
290	35.2	4.6	1.6	chr12	2082126	2082252	(131193057)	C	MIRb	SINE/MIR	(135)	133	3	781669
293	28.9	9.3	4.0	chr12	2365928	2366129	(130909180)	+	L1ME4a	LINE/L1	1724	1937	(4559)	782105
378	25.3	22.8	0.7	chr12	2366141	2366287	(130909022)	+	MIRb	SINE/MIR	26	214	(54)	782106
230	22.4	10.4	9.7	chr12	3203141	3203311	(130071998)	+	L2a	LINE/L2	3190	3426	(0)	783497
9810	11.9	4.9	3.8	chr12	3405385	3406943	(129868366)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	4	783798
15	10.8	3.3	0.0	chr12	4031250	4031279	(129244030)	+	(CCGC)n	Simple_repeat	1	31	(0)	784812
307	31.7	2.8	0.9	chr12	4165563	4165667	(129109642)	+	MamTip2	DNA/hAT-Tip100	111	217	(88)	785076
194	28.1	11.0	2.4	chr12	4579277	4579303	(128696006)	C	L2a	LINE/L2	(130)	3257	3231	785737
14	0.0	11.5	0.0	chr12	4579306	4579331	(128695978)	+	(ATAA)n	Simple_repeat	1	29	(0)	785739
216	27.4	1.4	3.3	chr12	4579547	4579631	(128695678)	C	L2a	LINE/L2	(313)	3113	3029	785737
1414	27.5	5.0	2.6	chr12	4786644	4787072	(128488237)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	9	786071
2353	22.7	4.3	7.2	chr12	5779508	5780317	(127494992)	+	L1MC4	LINE/L1	7221	8006	(36)	787514
370	23.7	12.6	4.9	chr12	6058260	6058437	(127216872)	C	MIR3	SINE/MIR	(31)	199	9	787934
1829	17.8	0.0	1.3	chr12	6134669	6134966	(127140343)	+	AluJb	SINE/Alu	11	304	(8)	788078
1450	25.2	7.9	5.1	chr12	6134967	6135228	(127140081)	+	L1ME3Cz	LINE/L1	732	996	(1)	788061
1907	10.5	0.0	3.5	chr12	7168047	7168331	(126106978)	C	AluSx1	SINE/Alu	(2)	310	36	790046
1523	15.6	4.1	5.0	chr12	7168332	7168505	(126106804)	C	MER66-int	LTR/ERV1	(2616)	4060	3880	790045
5662	16.7	5.2	1.0	chr12	7168489	7169948	(126105361)	+	MER66-int	LTR/ERV1	647	2169	(4507)	790047
1636	19.5	4.4	2.5	chr12	7838397	7838749	(125436560)	+	MLT1B-int	LTR/ERVL-MaLR	1371	1730	(5)	791168
2100	15.7	3.4	1.6	chr12	7838756	7839136	(125436173)	+	MLT1B	LTR/ERVL-MaLR	1	388	(2)	791168
3769	18.6	7.1	1.8	chr12	9678841	9679617	(123595692)	C	L1MC1	LINE/L1	(4267)	2241	1435	794166
309	22.4	5.5	0.0	chr12	9679622	9679706	(123595603)	+	L1MC2	LINE/L1	6246	6335	(9)	794172
567	25.0	13.2	0.5	chr12	10088493	10088697	(123186612)	C	Tigger11a	DNA/TcMar-Tigger	(245)	490	256	794710
3853	8.1	8.6	1.2	chr12	10136725	10137284	(123138025)	+	LTR14B	LTR/ERVK	4	608	(0)	794782
1127	13.5	4.7	0.0	chr12	10137285	10137447	(123137862)	+	AluJb	SINE/Alu	129	299	(13)	794783
3994	14.0	2.3	0.5	chr12	10360930	10361561	(122913748)	C	LTR9B	LTR/ERV1	(0)	644	1	795146
3402	11.0	5.5	0.2	chr12	12347015	12347515	(120927794)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	798000
331	31.5	12.2	1.4	chr12	12735311	12735631	(120539678)	C	L2c	LINE/L2	(179)	3208	2842	798663
3452	23.4	1.6	0.4	chr12	14220389	14221108	(119054201)	+	HERV17-int	LTR/ERV1	7898	8626	(0)	800977
2225	7.8	0.0	9.9	chr12	19578992	19579323	(113695986)	+	AluSq2	SINE/Alu	1	299	(14)	808453
317	26.5	1.6	13.0	chr12	19579324	19579484	(113695825)	C	HAL1ME	LINE/L1	(52)	2413	2273	808452
1470	25.8	4.6	7.4	chr12	19579493	19579888	(113695421)	+	MLT1G1	LTR/ERVL-MaLR	1	388	(191)	808454
1439	10.7	0.0	1.0	chr12	21233718	21233924	(112041385)	C	HUERS-P1-int	LTR/ERV1	(6053)	210	6	810537
3904	15.4	1.2	7.3	chr12	21233930	21234666	(112040643)	C	LTR8	LTR/ERV1	(0)	691	1	810537
1946	16.5	5.8	7.9	chr12	23161695	23162136	(110113173)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	813243
7794	18.9	4.9	5.1	chr12	23162137	23163101	(110112208)	C	L1MB7	LINE/L1	(1753)	4393	3482	813240
3756	12.4	0.4	0.0	chr12	23490117	23490642	(109784667)	+	MER1A	DNA/hAT-Charlie	2	529	(0)	813647
431	30.8	5.4	0.0	chr12	24546646	24546804	(108728505)	+	Zaphod3	DNA/hAT-Tip100	9	176	(2447)	815057
267	23.2	10.4	11.5	chr12	24546926	24547178	(108728131)	+	HAL1	LINE/L1	2036	2286	(221)	815058
16060	13.1	0.9	2.4	chr12	24960054	24960982	(108314327)	+	L1M1	LINE/L1	13	921	(6644)	815719
445	31.3	10.0	4.7	chr12	25279701	25280059	(107995250)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	216	816255
2255	25.9	9.9	7.3	chr12	25720084	25721935	(107553374)	+	L1MC5a	LINE/L1	707	2761	(16)	816882
502	25.5	5.3	1.2	chr12	26053507	26053669	(107221640)	C	MER103C	DNA/hAT-Charlie	(90)	207	38	817430
1883	9.4	1.8	2.5	chr12	26294513	26294794	(106980515)	C	L1MA2	LINE/L1	(9)	6295	6016	817770
198	14.7	0.0	0.0	chr12	26382903	26382936	(106892373)	C	MIRc	SINE/MIR	(113)	155	122	817896
2615	15.8	3.5	0.7	chr12	26382937	26383350	(106891959)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	817897
17	33.0	0.0	1.8	chr12	26937983	26938039	(106337270)	+	(GC)n	Simple_repeat	1	57	(0)	818728
1690	20.7	4.3	2.8	chr12	27827877	27828264	(105447045)	C	MLT1F1-int	LTR/ERVL-MaLR	(1095)	394	1	820216
334	31.0	5.2	2.7	chr12	27828302	27828450	(105446859)	C	MIRb	SINE/MIR	(112)	156	4	820223
1948	27.7	6.0	3.9	chr12	28177105	28177819	(105097490)	+	ERV3-16A3_I-int	LTR/ERVL	1059	1788	(3438)	820722
1604	14.1	12.3	6.2	chr12	28177820	28178175	(105097134)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	820723
2275	27.9	7.1	4.1	chr12	28454125	28455005	(104820304)	C	L1M3d	LINE/L1	(4978)	913	4	821090
342	33.9	17.8	1.5	chr12	29644752	29645094	(103630215)	+	L2b	LINE/L2	2935	3341	(46)	822636
2639	15.2	4.5	1.2	chr12	30597587	30597998	(102677311)	C	MSTA	LTR/ERVL-MaLR	(0)	428	3	823921
285	23.9	6.6	1.4	chr12	31626834	31626905	(101648404)	+	MIR3	SINE/MIR	133	208	(0)	825663
748	11.2	0.0	0.0	chr12	31728025	31728122	(101547187)	C	AluJo	SINE/Alu	(176)	136	39	825909
894	23.4	3.1	2.4	chr12	31728301	31728554	(101546755)	C	MIR	SINE/MIR	(0)	262	7	825910
603	27.8	20.9	4.4	chr12	32698166	32698600	(100576709)	+	LTR33	LTR/ERVL	9	515	(0)	827965
2212	13.8	5.2	0.3	chr12	32932644	32933005	(100342304)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	828380
15	19.7	0.0	0.0	chr12	32933019	32933047	(100342262)	+	G-rich	Low_complexity	1	29	(0)	828381
9556	7.5	9.5	0.3	chr12	33033050	33034496	(100240813)	C	LTR12C	LTR/ERV1	(10)	1569	3	828548
419	7.5	0.0	0.0	chr12	33818644	33818695	(99456614)	C	THE1B	LTR/ERVL-MaLR	(0)	364	313	829499
2501	8.3	11.5	3.7	chr12	33818696	33819142	(99456167)	C	LTR14B	LTR/ERVK	(0)	608	1	829500
3338	10.9	3.7	8.1	chr12	34048042	34048661	(99226648)	+	LTR14B	LTR/ERVK	17	608	(0)	829767
15200	10.8	3.0	2.9	chr12	34048662	34053131	(99222178)	+	L1PB1	LINE/L1	777	6375	(492)	829766
785	22.9	6.1	1.7	chr12	34286134	34288829	(98986480)	+	GSATII	Satellite/centr	1	3252	(1458)	830049
419	24.2	9.5	3.6	chr12	34356600	34359520	(98915789)	C	GSATII	Satellite/centr	(6)	3093	1	830086
437	24.9	8.3	3.7	chr12	34369327	34373431	(98901878)	C	GSATII	Satellite/centr	(7)	4294	1	830094
364	26.4	10.0	3.3	chr12	34384051	34385488	(98889821)	C	GSATII	Satellite/centr	(65)	1534	1	830101
475	25.2	9.0	3.7	chr12	34389653	34392639	(98882670)	+	GSATII	Satellite/centr	1	3145	(9)	830106
390	26.3	9.6	4.4	chr12	34394718	34396248	(98879061)	+	GSATII	Satellite/centr	1	1611	(4)	830109
546	24.9	9.5	4.8	chr12	34405316	34406246	(98869063)	+	GSATII	Satellite/centr	2116	3136	(4)	830113
371	27.0	7.8	4.2	chr12	34406941	34407335	(98867974)	+	GSATII	Satellite/centr	1	409	(4)	830115
302	27.2	11.0	3.7	chr12	34597666	34597950	(98677359)	+	GSATII	Satellite/centr	1	305	(7)	830146
1061	30.6	9.4	0.4	chr12	37435248	37435703	(95839606)	C	LTR16E1	LTR/ERVL	(15)	523	23	830244
3301	11.4	3.7	8.2	chr12	38343949	38344569	(94930740)	+	LTR14B	LTR/ERVK	17	608	(0)	830994
8111	12.1	1.8	0.8	chr12	38344570	38346545	(94928764)	+	L1PB1	LINE/L1	777	2782	(4081)	830993
1751	20.1	2.7	0.0	chr12	38948231	38948559	(94326750)	C	MLT1A0	LTR/ERVL-MaLR	(2)	363	26	831753
8028	8.6	0.6	0.1	chr12	39054295	39055360	(94219949)	+	MER11C	LTR/ERVK	1	1071	(0)	831887
2555	16.5	3.0	0.0	chr12	39114154	39114566	(94160743)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	831977
271	23.3	2.7	1.4	chr12	39173741	39173814	(94101495)	+	MLT1K	LTR/ERVL-MaLR	485	559	(36)	832073
2205	19.8	6.1	1.2	chr12	40954558	40955068	(92320241)	C	MER77B	LTR/ERVL	(5)	695	158	834423
712	27.0	4.9	7.1	chr12	41373976	41374349	(91900960)	C	LTR35B	LTR/ERV1	(11)	594	230	834971
4517	7.4	3.8	0.3	chr12	45175840	45176426	(88098883)	+	LTR14B	LTR/ERVK	1	608	(0)	840436
20	24.9	0.0	0.0	chr12	45176436	45176487	(88098822)	+	A-rich	Low_complexity	1	52	(0)	840437
15	29.2	2.9	1.4	chr12	45729041	45729108	(87546201)	+	(GGCA)n	Simple_repeat	1	70	(0)	841278
6482	17.8	3.7	1.7	chr12	46084706	46087362	(87187947)	C	MER83B-int	LTR/ERV1	(17)	4863	12	841816
193	28.1	3.4	0.0	chr12	46468863	46468919	(86806390)	C	L2a	LINE/L2	(1)	3425	3367	842326
6665	12.3	0.8	0.3	chr12	47516394	47517395	(85757914)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	625	843802
13	20.9	0.0	0.0	chr12	47737115	47737147	(85538162)	+	(GCCCCT)n	Simple_repeat	1	33	(0)	844116
15	5.5	0.0	0.0	chr12	47737170	47737188	(85538121)	+	(CT)n	Simple_repeat	1	19	(0)	844117
12	21.4	2.9	8.3	chr12	47791804	47791873	(85483436)	+	(CCCCT)n	Simple_repeat	1	72	(0)	844200
548	31.2	6.6	1.0	chr12	47884265	47884465	(85390844)	C	MIRb	SINE/MIR	(22)	246	34	844369
309	34.1	2.9	0.7	chr12	47884510	47884645	(85390664)	C	MIR	SINE/MIR	(27)	235	97	844370
717	29.3	17.7	5.3	chr12	48109879	48110439	(85164870)	C	L2b	LINE/L2	(5)	3370	2752	844717
6987	18.4	4.2	1.8	chr12	50915174	50916840	(82358469)	+	MER61-int	LTR/ERV1	100	1848	(5340)	850227
441	33.1	9.6	4.5	chr12	51247741	51248075	(82027234)	C	L2b	LINE/L2	(12)	3363	3010	850929
234	32.6	1.5	8.8	chr12	51336310	51336361	(81938948)	+	L2c	LINE/L2	2348	2401	(1018)	851155
1841	11.3	6.0	0.3	chr12	51336362	51336643	(81938666)	+	AluSx	SINE/Alu	1	299	(13)	851156
893	21.6	7.0	0.7	chr12	52713251	52713520	(80561789)	C	ORSL-2b	DNA/hAT-Tip100	(43)	465	178	853317
948	18.6	0.0	0.0	chr12	52713967	52714127	(80561182)	C	FRAM	SINE/Alu	(13)	163	3	853318
344	26.1	2.1	0.0	chr12	53169622	53169713	(80105596)	C	L1ME3G	LINE/L1	(588)	336	243	854202
399	24.6	15.2	4.6	chr12	53427041	53427257	(79848052)	C	L2a	LINE/L2	(0)	3426	3183	854735
1579	15.7	7.7	4.3	chr12	55049715	55050041	(78225268)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	857311
6618	10.0	14.3	1.5	chr12	56653406	56654480	(76620829)	+	MER11B	LTR/ERVK	1	1236	(0)	859963
2055	15.7	0.0	0.0	chr12	57454140	57454433	(75820876)	+	AluJo	SINE/Alu	6	299	(13)	861359
12	5.6	0.0	0.0	chr12	57454604	57454622	(75820687)	+	(CAC)n	Simple_repeat	1	19	(0)	861360
7304	7.2	0.9	1.2	chr12	59108214	59109184	(74166125)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	863680
244	16.3	6.5	0.0	chr12	59109227	59109269	(74166040)	+	Zaphod2	DNA/hAT-Tip100	3470	3515	(9)	863681
502	33.9	4.1	3.3	chr12	62518302	62518504	(70756805)	C	MIR	SINE/MIR	(53)	209	3	868053
11112	10.2	2.4	0.1	chr12	63178807	63180350	(70094959)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	869085
5198	14.2	0.4	1.4	chr12	63398371	63399086	(69876223)	+	HERVL18-int	LTR/ERVL	2720	3437	(2610)	869361
4019	9.7	1.5	6.9	chr12	63399087	63399727	(69875582)	C	LTR14B	LTR/ERVK	(0)	608	3	869362
296	25.0	6.1	2.1	chr12	64666752	64666845	(68608464)	+	L2a	LINE/L2	3322	3419	(7)	871589
499	25.3	7.1	3.1	chr12	65310023	65310185	(67965124)	+	MamRep1879	DNA/hAT-Tip100?	1	170	(46)	872626
194	37.1	2.4	0.8	chr12	65310293	65310417	(67964892)	C	L2c	LINE/L2	(712)	2707	2581	872625
576	25.3	7.7	10.5	chr12	65630010	65630332	(67644977)	C	L2a	LINE/L2	(338)	3081	2769	873073
11434	6.1	4.8	3.3	chr12	65744177	65745729	(67529580)	+	LTR12C	LTR/ERV1	3	1579	(0)	873263
2491	6.7	0.0	0.7	chr12	66170196	66170494	(67104815)	C	AluSc8	SINE/Alu	(14)	297	1	873920
1443	23.1	5.6	4.0	chr12	66266493	66266668	(67008641)	+	MER54B	LTR/ERVL	221	414	(487)	874091
23	3.5	0.0	3.2	chr12	66266686	66266716	(67008593)	+	(GT)n	Simple_repeat	1	31	(0)	874093
2242	16.6	7.0	0.0	chr12	66502470	66502867	(66772442)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	874469
276	31.2	7.1	6.5	chr12	66749134	66749287	(66526022)	+	L2c	LINE/L2	3231	3385	(2)	874837
403	27.6	9.4	3.0	chr12	66787900	66788097	(66487212)	+	MLT1K	LTR/ERVL-MaLR	21	232	(363)	874904
2020	17.4	7.3	2.5	chr12	66945351	66945756	(66329553)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	875141
424	23.9	10.0	1.7	chr12	66945804	66945922	(66329387)	C	LTR85b	LTR/Gypsy?	(52)	732	603	875142
1370	13.4	0.4	0.0	chr12	67150924	67151154	(66124155)	C	L1MA2	LINE/L1	(10)	6294	6063	875492
510	31.4	1.5	3.4	chr12	67151158	67151424	(66123885)	C	L1MEg	LINE/L1	(4953)	1247	986	875491
3080	25.0	6.2	5.6	chr12	67371767	67372862	(65902447)	C	L1MEg	LINE/L1	(4501)	3049	1946	875810
750	27.2	7.8	2.3	chr12	68040349	68040588	(65234721)	+	MIR	SINE/MIR	3	268	(0)	876788
2970	28.8	8.7	3.5	chr12	68187414	68188605	(65086704)	C	L2	LINE/L2	(2155)	1264	5	876988
4201	7.3	4.9	3.0	chr12	68209155	68209750	(65065559)	C	LTR14B	LTR/ERVK	(0)	608	1	877019
662	26.6	7.3	0.9	chr12	68487944	68488174	(64787135)	+	MIRc	SINE/MIR	15	261	(7)	877469
2480	7.9	0.3	0.0	chr12	68488353	68488656	(64786653)	C	AluSc8	SINE/Alu	(6)	305	1	877470
1022	20.2	13.0	0.3	chr12	69012639	69012921	(64262388)	C	LTR54B	LTR/ERV1	(2)	496	173	878510
402	7.7	0.0	0.0	chr12	69012920	69012971	(64262338)	C	LTR54B	LTR/ERV1	(446)	52	1	878510
2709	15.2	2.8	0.2	chr12	69012975	69013389	(64261920)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	878511
2111	12.7	0.0	3.8	chr12	70153784	70154097	(63121212)	C	AluSx3	SINE/Alu	(9)	302	1	880471
4079	12.8	3.5	6.7	chr12	70154098	70154682	(63120627)	C	LTR8	LTR/ERV1	(114)	577	1	880470
968	28.9	3.1	4.0	chr12	71650742	71651027	(61624282)	+	L2a	LINE/L2	2762	3050	(369)	882623
730	24.6	5.3	0.0	chr12	71651028	71651206	(61624103)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	882624
968	28.9	12.0	3.6	chr12	71651207	71651533	(61623776)	+	L2a	LINE/L2	3051	3425	(1)	882623
1925	15.3	3.5	10.2	chr12	71727990	71728448	(61546861)	C	MSTA	LTR/ERVL-MaLR	(1)	427	1	882755
2286	25.6	1.4	3.1	chr12	74230415	74230937	(59044372)	+	MLT2B3	LTR/ERVL	1	514	(40)	885960
5657	15.8	2.9	2.8	chr12	75457666	75458735	(57816574)	C	MER11C	LTR/ERVK	(0)	1071	1	887563
2534	15.8	2.8	2.2	chr12	75538017	75538668	(57736641)	+	MER50	LTR/ERV1	1	711	(23)	887700
81	30.8	1.4	0.3	chr12	76030576	76030858	(57244451)	+	(TGCGGC)n	Simple_repeat	1	287	(0)	888508
1665	17.5	9.4	3.2	chr12	76202754	76203101	(57072208)	C	MER57E1	LTR/ERV1	(0)	372	1	888838
3288	11.8	6.6	5.3	chr12	76240345	76240928	(57034381)	+	LTR14B	LTR/ERVK	17	608	(0)	888922
2127	15.0	0.0	0.0	chr12	79605792	79606097	(53669212)	+	AluSz6	SINE/Alu	1	306	(6)	893728
999	21.3	13.4	9.5	chr12	79606098	79606365	(53668944)	+	L1MB7	LINE/L1	5894	6167	(17)	893727
2051	16.9	0.0	0.0	chr12	79721096	79721391	(53553918)	C	AluJb	SINE/Alu	(16)	296	1	893946
359	31.9	10.7	11.3	chr12	79721392	79721684	(53553625)	+	L2b	LINE/L2	3071	3361	(14)	893947
498	33.6	10.6	4.3	chr12	80059916	80060469	(53214840)	C	L2a	LINE/L2	(4)	3422	2832	894502
1763	19.5	1.1	4.0	chr12	82643670	82644048	(50631261)	C	MSTB	LTR/ERVL-MaLR	(0)	426	59	898030
912	30.5	4.4	0.7	chr12	82644041	82644347	(50630962)	+	MLT1F	LTR/ERVL-MaLR	135	453	(95)	898031
11591	10.4	1.5	0.0	chr12	86036211	86037927	(47237382)	C	L1PA7	LINE/L1	(1890)	4571	2829	902439
2478	8.6	10.1	0.4	chr12	86037929	86038371	(47236938)	C	LTR14B	LTR/ERVK	(1)	607	1	902440
4250	6.3	6.1	0.2	chr12	86555373	86555941	(46719368)	+	LTR14B	LTR/ERVK	4	608	(0)	903116
834	31.6	14.7	1.1	chr12	87249933	87250396	(46024913)	C	L2a	LINE/L2	(702)	2717	2180	903967
1199	34.8	6.8	5.3	chr12	87250553	87251499	(46023810)	+	LTR78	LTR/ERV1	281	1242	(62)	903968
1396	26.1	12.6	4.2	chr12	89343031	89343558	(43931751)	+	MLT1G1	LTR/ERVL-MaLR	1	579	(0)	906875
15	24.7	0.0	2.2	chr12	89352704	89352748	(43922561)	+	GA-rich	Low_complexity	1	45	(0)	906881
2038	19.1	7.2	0.0	chr12	89715578	89715974	(43559335)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	907481
22167	15.1	2.2	2.1	chr12	89769142	89771604	(43503705)	C	ERVL-B4-int	LTR/ERVL	(2052)	3662	1244	907558
4417	14.5	0.8	1.4	chr12	90148137	90148296	(43127013)	+	MER50	LTR/ERV1	557	711	(23)	908116
1334	20.2	5.2	6.2	chr12	90148300	90148685	(43126624)	+	MER39	LTR/ERV1	325	706	(1)	908118
2724	15.1	1.9	0.7	chr12	93173045	93173471	(40101838)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	912877
678	32.3	5.0	7.8	chr12	93173472	93174015	(40101294)	C	L2c	LINE/L2	(352)	3067	2536	912872
517	26.8	7.2	10.2	chr12	94083125	94083219	(39192090)	+	MER102a	DNA/hAT-Charlie	176	264	(66)	914626
2047	16.1	8.4	2.0	chr12	94083245	94083644	(39191665)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	914628
536	21.0	6.8	4.2	chr12	94221115	94221258	(39054051)	+	L2a	LINE/L2	3279	3426	(0)	914886
1581	30.9	12.6	2.9	chr12	94490061	94490479	(38784830)	+	L2a	LINE/L2	2724	3179	(247)	915272
848	18.8	2.0	0.0	chr12	95446294	95446437	(37828872)	C	HERVK22-int	LTR/ERVK	(4364)	2473	2327	917256
2748	7.2	0.0	0.0	chr12	95456102	95456448	(37818861)	C	HERV9N-int	LTR/ERV1	(2440)	2934	2588	917260
187	35.9	6.4	7.5	chr12	95551438	95551690	(37723619)	+	L2b	LINE/L2	3107	3356	(19)	917440
204	28.4	5.0	8.7	chr12	95943038	95943141	(37332168)	+	MIRb	SINE/MIR	71	170	(98)	918160
1883	16.2	12.2	0.0	chr12	96036748	96037123	(37238186)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	918302
411	31.9	18.2	5.8	chr12	96037124	96037692	(37237617)	C	L2c	LINE/L2	(932)	2487	1824	918301
253	28.3	6.4	15.2	chr12	96906710	96907005	(36368304)	+	L2b	LINE/L2	3139	3396	(30)	919870
2170	14.4	8.6	9.9	chr12	100132277	100132664	(33142645)	+	MSTB2	LTR/ERVL-MaLR	2	408	(49)	924943
2319	15.1	7.2	1.4	chr12	100582022	100582464	(32692845)	C	LTR7C	LTR/ERV1	(0)	471	1	925860
622	25.3	15.7	0.0	chr12	101832036	101832229	(31443080)	C	MIR	SINE/MIR	(1)	261	32	928033
690	12.4	4.5	12.4	chr12	101832318	101832462	(31442847)	+	FLAM_C	SINE/Alu	1	133	(10)	928034
6162	16.4	1.0	0.2	chr12	101866278	101867244	(31408065)	+	LTR1D	LTR/ERV1	1	975	(0)	928133
667	26.0	7.8	1.5	chr12	102633372	102633548	(30641761)	C	MIR3	SINE/MIR	(3)	205	15	929355
733	30.2	6.5	4.7	chr12	102910655	102910925	(30364384)	+	MER45C	DNA/hAT-Tip100	99	368	(585)	929835
516	32.4	8.1	2.5	chr12	103575203	103575481	(29699828)	C	MamGypLTR3	LTR/Gypsy	(0)	894	599	930887
680	21.2	9.6	2.2	chr12	103650703	103650885	(29624424)	C	L1ME3A	LINE/L1	(1)	6172	5975	931018
2273	12.0	0.0	0.0	chr12	103865954	103866261	(29409048)	+	AluSx1	SINE/Alu	1	308	(4)	931431
229	27.6	4.8	0.0	chr12	104408754	104408851	(28866458)	C	MIRc	SINE/MIR	(126)	142	40	932506
984	25.8	14.2	3.5	chr12	104903082	104903440	(28371869)	+	L2a	LINE/L2	2597	3008	(411)	933477
4256	15.6	7.2	1.4	chr12	104956707	104957546	(28317763)	+	L1MB7	LINE/L1	5293	6184	(0)	933574
343	21.1	27.9	0.0	chr12	107209387	107209534	(26065775)	C	MER5C1	DNA/hAT-Charlie	(0)	263	72	937641
258	23.3	0.0	0.0	chr12	107209655	107209697	(26065612)	C	MER63B	DNA/hAT-Blackjack	(0)	436	394	937642
734	31.4	7.7	9.2	chr12	107240163	107240533	(26034776)	+	MLT1N2	LTR/ERVL-MaLR	1	365	(197)	937703
219	30.2	7.9	2.5	chr12	107411674	107411792	(25863517)	C	L3	LINE/CR1	(3267)	832	707	938085
777	17.8	10.8	0.0	chr12	107486044	107486217	(25789092)	+	MSTB2	LTR/ERVL-MaLR	1	195	(262)	938258
1406	27.1	12.4	3.2	chr12	107592162	107592900	(25682409)	+	L1ME3E	LINE/L1	5365	6180	(62)	938505
7050	8.4	14.1	10.3	chr12	107864194	107865394	(25409915)	+	LTR12D	LTR/ERV1	1	1254	(0)	938983
48	25.1	3.9	2.7	chr12	108597458	108597635	(24677674)	+	(CA)n	Simple_repeat	1	185	(0)	940623
26	6.3	0.0	0.0	chr12	109714197	109714230	(23561079)	+	(CCG)n	Simple_repeat	1	34	(0)	943153
764	22.7	13.4	5.1	chr12	110102154	110102548	(23172761)	C	MLT1L	LTR/ERVL-MaLR	(29)	581	149	944033
2223	13.8	0.0	0.0	chr12	110843514	110843817	(22431492)	C	AluJo	SINE/Alu	(7)	305	2	945700
192	19.6	9.7	0.0	chr12	111244444	111244499	(22030810)	+	MIR3	SINE/MIR	40	101	(107)	946604
802	22.8	1.2	0.0	chr12	111244503	111244673	(22030636)	C	L1PA7	LINE/L1	(512)	8792	8620	946598
2125	13.3	0.0	0.3	chr12	111463794	111464087	(21811222)	C	AluSx	SINE/Alu	(19)	293	1	947141
14	25.4	3.0	4.4	chr12	112418853	112418936	(20856373)	+	(GGC)n	Simple_repeat	1	82	(0)	949170
310	27.6	9.7	3.5	chr12	113724489	113724661	(19550648)	C	L2a	LINE/L2	(13)	3413	3229	952333
445	29.1	0.7	0.0	chr12	113724713	113724846	(19550463)	C	MIR3	SINE/MIR	(41)	167	33	952334
3586	12.7	0.2	4.0	chr12	114585548	114585914	(18689395)	C	MER1A	DNA/hAT-Charlie	(0)	529	184	954031
2326	10.4	0.3	0.0	chr12	114585915	114586213	(18689096)	+	AluSx	SINE/Alu	1	300	(12)	954032
2994	21.2	5.4	2.7	chr12	114860148	114860763	(18414546)	C	L1ME1	LINE/L1	(1)	6178	5544	954743
1594	25.5	6.2	6.2	chr12	115877105	115877664	(17397645)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	956976
2206	10.0	0.0	5.9	chr12	116429435	116429755	(16845554)	+	AluSp	SINE/Alu	1	302	(11)	958026
21	7.5	0.0	0.0	chr12	116429812	116429839	(16845470)	+	(A)n	Simple_repeat	1	28	(0)	958027
15	10.1	2.9	2.9	chr12	116460068	116460101	(16815208)	+	GA-rich	Low_complexity	1	35	(0)	958110
228	27.7	5.9	3.5	chr12	116532619	116532734	(16742575)	C	L2a	LINE/L2	(618)	2801	2683	958297
272	21.2	1.5	1.5	chr12	116907160	116907226	(16368083)	+	MLT1D	LTR/ERVL-MaLR	493	559	(3)	959250
265	31.9	6.8	1.4	chr12	116907341	116907480	(16367829)	C	MIRb	SINE/MIR	(1)	267	120	959255
753	29.7	0.9	5.9	chr12	117683793	117684028	(15591281)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	960849
383	31.7	7.5	9.1	chr12	117684098	117684382	(15590927)	+	L2b	LINE/L2	3076	3355	(20)	960850
440	25.8	16.1	7.2	chr12	117965050	117965408	(15309901)	+	MLT1J	LTR/ERVL-MaLR	108	504	(8)	961497
457	22.5	3.4	3.8	chr12	120620244	120620395	(12654914)	C	MIRb	SINE/MIR	(99)	163	20	967524
702	29.2	7.5	0.7	chr12	121032453	121032738	(12242571)	+	LTR16C	LTR/ERVL	162	468	(21)	968426
1879	15.3	3.0	0.3	chr12	121455431	121455724	(11819585)	+	AluJr	SINE/Alu	2	303	(9)	969412
259	25.4	0.0	0.0	chr12	121455870	121455924	(11819385)	C	MER46C	DNA/TcMar-Tigger	(283)	55	1	969413
1894	13.8	0.3	6.7	chr12	121503285	121503611	(11771698)	C	AluJo	SINE/Alu	(6)	306	1	969549
375	23.0	28.2	2.8	chr12	121664113	121664293	(11611016)	+	MLT1K	LTR/ERVL-MaLR	368	594	(1)	969981
450	29.5	10.0	1.0	chr12	121782009	121782329	(11492980)	C	L1MC4	LINE/L1	(0)	8042	7692	970319
316	29.9	2.0	5.3	chr12	122155946	122156097	(11119212)	C	MIRb	SINE/MIR	(26)	242	96	971192
10471	5.7	11.7	0.4	chr12	122675765	122677162	(10598147)	C	LTR12C	LTR/ERV1	(0)	1579	3	972412
572	25.8	0.7	1.2	chr12	122974375	122974556	(10300753)	+	MIR	SINE/MIR	29	204	(26)	973092
8321	13.0	6.5	1.1	chr12	123247964	123248418	(10026891)	C	L1PBa1	LINE/L1	(4016)	2847	2349	973619
8788	12.8	11.4	1.0	chr12	123248419	123249827	(10025482)	C	LTR12C	LTR/ERV1	(2)	1577	3	973624
1942	16.7	1.9	7.3	chr12	123517832	123518221	(9757088)	+	L1MB3	LINE/L1	5749	6133	(50)	974291
212	35.8	10.2	0.0	chr12	123534618	123534810	(9740499)	+	L2c	LINE/L2	3120	3334	(53)	974336
1269	27.7	9.9	2.5	chr12	123571335	123571727	(9703582)	+	MLT1J2	LTR/ERVL-MaLR	10	434	(14)	974436
2235	22.4	7.5	1.9	chr12	123891717	123892127	(9383182)	C	MER68	LTR/ERVL	(2)	561	143	975143
264	30.4	1.0	1.9	chr12	124264241	124264344	(9010965)	C	MER5B	DNA/hAT-Charlie	(70)	108	6	975790
615	23.5	0.7	1.3	chr12	124273788	124273942	(9001367)	C	MLT1H	LTR/ERVL-MaLR	(276)	273	120	975810
904	21.6	9.3	2.9	chr12	124707860	124708131	(8567178)	+	MLT1J	LTR/ERVL-MaLR	5	295	(217)	976629
367	30.8	2.9	4.3	chr12	124766900	124767106	(8508203)	C	MamRep4096	DNA/hAT-Tip100	(220)	206	3	976784
3949	25.7	0.7	2.6	chr12	124937514	124938486	(8336823)	+	HERVIP10FH-int	LTR/ERV1	4146	5100	(2)	977197
4301	10.5	1.3	4.9	chr12	125725160	125725788	(7549521)	+	LTR14B	LTR/ERVK	3	608	(0)	978636
2124	23.5	2.5	5.9	chr12	128718067	128718640	(4556669)	+	MLT2B3	LTR/ERVL	1	554	(0)	983717
2262	17.3	2.6	6.5	chr12	128718653	128718876	(4556433)	C	MSTA	LTR/ERVL-MaLR	(0)	428	204	983718
3495	7.6	0.0	0.2	chr12	128718877	128719337	(4555972)	C	L1PA8	LINE/L1	(0)	6172	5713	983719
302	27.3	7.5	0.0	chr12	128930439	128930537	(4344772)	+	MER113	DNA/hAT-Charlie	410	516	(5)	984168
1861	16.1	0.3	0.3	chr12	130847596	130847893	(2427416)	C	AluJb	SINE/Alu	(8)	304	7	987315
1912	18.3	0.8	1.9	chr12	130923331	130923698	(2351611)	+	MLT1A0	LTR/ERVL-MaLR	1	364	(1)	987480
3983	11.2	0.6	0.0	chr12	130969275	130969800	(2305509)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	987568
895	31.7	9.5	0.9	chr12	131242804	131243264	(2032045)	C	MLT1J	LTR/ERVL-MaLR	(7)	505	1	987903
268	28.1	3.3	0.0	chr12	132190020	132190108	(1085201)	C	L1MD3	LINE/L1	(5)	7990	7899	989190
361	26.4	5.5	0.0	chr12	132190290	132190410	(1084899)	C	L1M5	LINE/L1	(697)	5747	5620	989191
1565	19.4	5.8	1.9	chr12	132446333	132446699	(828610)	+	LTR8	LTR/ERV1	310	691	(0)	989467
233	20.0	0.0	3.2	chr12	132869068	132869129	(406180)	+	L1MB8	LINE/L1	5971	6030	(148)	990069
233	20.0	0.0	3.2	chr12	132869107	132869168	(406141)	+	L1MB8	LINE/L1	5971	6030	(148)	990069
233	20.0	0.0	3.2	chr12	132869146	132869207	(406102)	+	L1MB8	LINE/L1	5971	6030	(148)	990069
570	24.4	1.9	11.4	chr12	132869185	132869411	(405898)	+	L1MB8	LINE/L1	5971	6175	(3)	990070
1461	22.5	3.0	7.1	chr12	132884498	132884804	(390505)	+	MLT1A	LTR/ERVL-MaLR	9	315	(59)	990103
2206	13.1	0.0	1.0	chr12	132884805	132885118	(390191)	+	AluSz	SINE/Alu	1	311	(1)	990104
3642	11.1	1.5	2.7	chr12	132949016	132949570	(325739)	+	LTR14	LTR/ERVK	1	548	(0)	990223
4125	12.7	3.6	5.0	chr12	132998465	132999156	(276153)	C	LTR49-int	LTR/ERV1	(1292)	5466	4835	990323
256	19.7	7.0	0.0	chr12	133109403	133109468	(165841)	+	ERVL-E-int	LTR/ERVL	1584	1654	(4060)	990523
444	22.7	16.7	0.5	chr12	133109595	133109789	(165520)	+	L1MEg	LINE/L1	1347	1579	(4505)	990524
363	26.0	0.0	0.0	chr12	133123261	133123333	(151976)	+	L2a	LINE/L2	3333	3405	(21)	990551
1573	18.6	6.3	1.1	chr12	133123443	133123727	(151582)	+	AluJr	SINE/Alu	1	301	(11)	990552
2953	16.9	0.9	6.0	chr12	133161772	133162523	(112786)	+	L1M2	LINE/L1	1	548	(6301)	990620
767	26.8	8.3	6.0	chr12	133219669	133220116	(55193)	+	L1ME1	LINE/L1	5544	6002	(177)	990712
1780	12.2	0.0	5.4	chr13	18212273	18212550	(96151778)	+	AluSc8	SINE/Alu	13	275	(36)	990835
147	14.9	7.9	1.9	chr13	18212560	18212954	(96151374)	+	(TA)n	Simple_repeat	1	418	(0)	990836
3680	13.6	0.5	5.2	chr13	19409947	19410567	(94953761)	+	LTR14B	LTR/ERVK	17	608	(0)	992389
272	10.7	11.1	0.0	chr13	20272710	20272765	(94091563)	C	Alu	SINE/Alu	(0)	166	104	994005
3815	7.2	0.4	4.4	chr13	20678247	20678766	(93685562)	C	MER9B	LTR/ERVK	(0)	499	1	994692
3547	16.9	4.0	4.4	chr13	20683985	20684907	(93679421)	C	HERVK9-int	LTR/ERVK	(5198)	898	1	994693
3887	7.0	0.4	1.4	chr13	20684908	20685411	(93678917)	C	MER9B	LTR/ERVK	(0)	499	1	994693
230	34.5	9.0	2.5	chr13	21692457	21692652	(92671676)	+	MIRb	SINE/MIR	22	231	(37)	996533
9705	12.1	6.0	1.5	chr13	21943930	21945436	(92418892)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	1	996870
1887	9.5	1.7	18.2	chr13	22551550	22551962	(91812366)	C	LTR14A	LTR/ERVK	(0)	344	1	997605
9690	8.6	10.5	2.1	chr13	22899527	22900969	(91463359)	C	LTR12C	LTR/ERV1	(0)	1579	3	998079
824	19.6	3.1	0.1	chr13	22963000	22963196	(91401132)	+	L1M4	LINE/L1	5262	5467	(687)	998145
324	26.9	7.8	3.2	chr13	23436682	23436804	(90927524)	C	LTR90A	LTR	(184)	792	664	998840
854	7.9	0.0	1.7	chr13	24518749	24518864	(89845464)	C	L1PA6	LINE/L1	(0)	6154	6041	1000417
1674	16.3	2.0	1.7	chr13	24518865	24519163	(89845165)	C	LTR14B	LTR/ERVK	(1)	607	308	1000418
360	27.8	7.5	6.1	chr13	25152857	25153120	(89211208)	C	LTR16A1	LTR/ERVL	(0)	456	189	1001386
3159	9.6	6.7	1.1	chr13	25427101	25427551	(88936777)	+	MER1A	DNA/hAT-Charlie	51	528	(1)	1001838
1189	25.6	6.2	6.5	chr13	26628531	26629144	(87735184)	C	ERV3-16A3_I-int	LTR/ERVL	(366)	4860	4249	1003570
1388	27.4	9.7	3.2	chr13	26629191	26629975	(87734353)	C	ERV3-16A3_I-int	LTR/ERVL	(1379)	3847	3006	1003570
657	21.9	2.5	0.0	chr13	27479433	27479587	(86884741)	C	LTR33A_	LTR/ERVL	(2)	529	371	1005022
241	28.2	0.0	0.0	chr13	27479738	27479808	(86884520)	C	LTR33A_	LTR/ERVL	(456)	75	5	1005022
971	17.7	3.7	1.3	chr13	28635441	28635598	(85728730)	+	AluJo	SINE/Alu	137	298	(14)	1007080
1196	17.7	1.2	9.0	chr13	28635599	28635720	(85728608)	+	L1MC2	LINE/L1	6237	6338	(6)	1007079
239	24.0	10.3	4.6	chr13	28635724	28635832	(85728496)	C	Charlie29a	DNA/hAT-Charlie	(573)	146	31	1007078
2406	9.1	0.0	0.0	chr13	29367940	29368237	(84996091)	C	AluYk4	SINE/Alu	(13)	298	1	1008053
11	22.2	0.0	6.4	chr13	29911797	29911843	(84452485)	+	G-rich	Low_complexity	1	47	(0)	1008819
1683	15.2	7.2	7.5	chr13	30414692	30415067	(83949261)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1009656
279	20.0	0.0	1.8	chr13	30778828	30778883	(83585445)	+	L2a	LINE/L2	2072	2126	(1293)	1010373
1813	19.6	8.7	3.9	chr13	30778932	30779344	(83584984)	+	MSTB2	LTR/ERVL-MaLR	23	457	(0)	1010374
330	30.3	34.2	0.0	chr13	32120139	32120314	(82244014)	C	MIRb	SINE/MIR	(18)	250	13	1012316
5493	11.4	1.7	3.0	chr13	32120469	32120658	(82243670)	C	L1PB1	LINE/L1	(0)	6151	5974	1012317
2813	11.5	0.0	9.2	chr13	33467000	33467539	(80896789)	C	MER1A	DNA/hAT-Charlie	(138)	391	1	1014346
1960	15.9	3.5	3.2	chr13	33602621	33602958	(80761370)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1014527
2364	17.0	2.8	4.5	chr13	33602959	33603399	(80760929)	+	LOR1b	LTR/ERV1	27	461	(0)	1014526
2188	12.4	5.0	0.9	chr13	34953761	34954085	(79410243)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1016547
1960	15.1	4.1	2.9	chr13	34954086	34954291	(79410037)	+	MER2	DNA/TcMar-Tigger	140	345	(0)	1016546
299	32.8	9.0	0.0	chr13	35506819	35506949	(78857379)	C	L3	LINE/CR1	(1)	4098	3955	1017211
2232	24.1	8.9	4.7	chr13	35506998	35507740	(78856588)	+	L2	LINE/L2	1906	2682	(737)	1017212
18	0.0	0.0	0.0	chr13	36131374	36131396	(78232932)	+	(GGC)n	Simple_repeat	1	23	(0)	1018106
17	10.5	3.2	0.0	chr13	36131433	36131463	(78232865)	+	(CCT)n	Simple_repeat	1	32	(0)	1018107
453	24.1	8.5	3.0	chr13	37056808	37056974	(77307354)	C	MER5B	DNA/hAT-Charlie	(0)	178	2	1019471
1917	16.2	2.6	2.3	chr13	37057017	37057324	(77307004)	+	AluJb	SINE/Alu	1	309	(3)	1019472
3983	11.4	1.1	2.0	chr13	37090226	37090778	(77273550)	+	LTR14	LTR/ERVK	1	548	(0)	1019537
654	33.3	10.6	1.2	chr13	37090807	37091149	(77273179)	+	Charlie17b	DNA/hAT-Charlie	14	392	(812)	1019538
1769	20.6	0.3	7.2	chr13	37144372	37144790	(77219538)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	1019630
844	30.4	6.4	4.0	chr13	37144791	37145583	(77218745)	+	ERV3-16A3_I-int	LTR/ERVL	1890	2819	(2848)	1019625
2522	9.1	0.7	0.3	chr13	40570031	40570338	(73793990)	+	AluSc	SINE/Alu	1	309	(0)	1024327
3841	13.3	2.2	13.5	chr13	41148180	41148942	(73215386)	+	LTR76	LTR/ERV1	1	675	(0)	1025343
1137	17.6	0.0	5.8	chr13	41148943	41149024	(73215304)	+	AluJo	SINE/Alu	214	294	(18)	1025342
749	18.6	1.3	6.6	chr13	41149030	41149196	(73215132)	C	L1MD	LINE/L1	(2037)	4109	3952	1025337
3310	13.0	1.8	2.9	chr13	41308714	41309192	(73055136)	C	L1PA15	LINE/L1	(0)	6165	5691	1025635
401	32.8	6.6	0.5	chr13	41528556	41528754	(72835574)	+	L1M7	LINE/L1	317	528	(5690)	1025991
609	32.7	11.9	5.4	chr13	41528936	41530142	(72834186)	+	L1ME4b	LINE/L1	3651	4946	(1200)	1025993
2367	21.2	5.1	0.5	chr13	41924876	41925569	(72438759)	+	L1MA9	LINE/L1	2621	3394	(4172)	1026559
3475	12.2	2.8	0.0	chr13	41937155	41937644	(72426684)	C	MER1A	DNA/hAT-Charlie	(0)	529	26	1026573
2390	11.5	13.8	0.2	chr13	42270319	42270738	(72093590)	+	LTR19A	LTR/ERV1	1	486	(0)	1027114
459	34.7	9.2	1.2	chr13	42270739	42270925	(72093403)	+	L2a	LINE/L2	2939	3158	(268)	1027113
4145	13.1	1.7	5.3	chr13	42674925	42675641	(71688687)	C	LTR8	LTR/ERV1	(0)	691	1	1027719
3109	17.3	2.2	0.0	chr13	42792069	42792297	(71572031)	C	L1PA17	LINE/L1	(379)	5787	5559	1027902
2475	24.4	3.8	0.0	chr13	42792298	42792935	(71571393)	C	L1ME1	LINE/L1	(66)	6113	5451	1027904
7724	7.4	1.7	1.4	chr13	43040544	43041509	(71322819)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	1028317
313	35.4	4.3	6.1	chr13	43354775	43355036	(71009292)	+	L2c	LINE/L2	3012	3268	(119)	1028749
11	27.6	0.0	0.0	chr13	43786271	43786309	(70578019)	+	G-rich	Low_complexity	1	39	(0)	1029332
320	30.6	2.1	8.8	chr13	43984661	43984864	(70379464)	+	LTR103_Mam	LTR/ERV1?	259	448	(27)	1029618
334	23.9	1.7	7.4	chr13	44145156	44145277	(70219051)	C	L2c	LINE/L2	(0)	3387	3273	1029845
1889	18.1	0.0	1.0	chr13	44168819	44169132	(70195196)	+	AluJb	SINE/Alu	1	311	(1)	1029878
2074	14.8	0.3	0.0	chr13	44691537	44691840	(69672488)	+	AluSx1	SINE/Alu	2	306	(6)	1030763
2097	18.5	6.5	9.7	chr13	44691841	44691896	(69672432)	+	Arthur1	DNA/hAT-Tip100	3901	3947	(0)	1030761
4058	15.3	1.9	2.7	chr13	44726599	44727295	(69637033)	+	LTR8	LTR/ERV1	1	691	(0)	1030842
4670	7.5	4.7	4.2	chr13	45133289	45133959	(69230369)	+	LTR76	LTR/ERV1	1	675	(0)	1031660
1714	25.0	10.7	8.0	chr13	45133960	45134070	(69230258)	C	L2a	LINE/L2	(2401)	1018	904	1031654
1404	14.4	0.7	15.8	chr13	45418796	45419150	(68945178)	+	AluSx1	SINE/Alu	2	302	(10)	1032248
9206	11.5	2.6	0.1	chr13	45805011	45806734	(68557594)	+	L1PA16	LINE/L1	4408	6165	(1)	1032864
22228	9.9	1.3	0.8	chr13	46214629	46220929	(68143399)	C	L1PA8A	LINE/L1	(1)	6445	144	1033529
1778	11.7	10.8	2.6	chr13	46932419	46932819	(67431509)	C	LTR14B	LTR/ERVK	(0)	608	1	1034646
488	16.9	2.4	0.0	chr13	48031770	48031852	(66332476)	C	Alu	SINE/Alu	(8)	303	219	1036148
4322	6.7	7.1	3.8	chr13	48031853	48032439	(66331889)	C	LTR14B	LTR/ERVK	(0)	608	1	1036149
1241	19.4	9.0	5.7	chr13	48487363	48487580	(65876748)	C	MSTA1	LTR/ERVL-MaLR	(246)	219	1	1036893
6238	12.4	3.3	0.5	chr13	48487611	48488734	(65875594)	+	L1MC1	LINE/L1	5188	6333	(0)	1036895
1803	18.3	5.1	0.6	chr13	48866146	48866480	(65497848)	+	MLT1A0	LTR/ERVL-MaLR	15	365	(0)	1037475
16332	17.6	6.1	4.6	chr13	48867527	48871312	(65493016)	C	HERVH-int	LTR/ERV1	(2693)	5020	1172	1037477
383	27.8	10.4	2.2	chr13	50227310	50227482	(64136846)	C	MIR3	SINE/MIR	(5)	203	16	1039800
221	29.0	0.9	0.0	chr13	50227701	50227763	(64136565)	C	MIR3	SINE/MIR	(88)	142	78	1039801
864	18.8	5.8	1.8	chr13	51849938	51850102	(62514226)	+	AluJr	SINE/Alu	5	176	(136)	1042198
12065	8.9	0.2	0.1	chr13	52015829	52017405	(62346923)	+	THE1A-int	LTR/ERVL-MaLR	2	1580	(0)	1042431
11201	8.4	3.1	1.3	chr13	52814234	52815781	(61548547)	C	LTR12C	LTR/ERV1	(0)	1579	3	1043720
2234	13.8	6.3	1.9	chr13	54320404	54320780	(60043548)	+	MSTB	LTR/ERVL-MaLR	1	395	(31)	1045745
26446	7.1	1.2	0.8	chr13	54702255	54706382	(59657946)	+	HERV9NC-int	LTR/ERV1	1622	5224	(894)	1046248
1721	10.0	2.2	9.2	chr13	61862982	61863317	(52501011)	C	LTR14A	LTR/ERVK	(0)	344	54	1055292
2708	24.3	6.9	3.2	chr13	64206412	64207397	(50156931)	C	LTR2752	LTR/ERV1	(1)	1076	1	1058245
334	39.6	4.5	1.9	chr13	67043129	67043491	(47320837)	C	L2c	LINE/L2	(528)	2891	2519	1061789
232	27.8	3.2	0.0	chr13	67043644	67043733	(47320595)	C	MLT1L	LTR/ERVL-MaLR	(49)	561	469	1061790
21	30.4	2.6	0.0	chr13	71864950	71865025	(42499303)	+	GA-rich	Low_complexity	1	78	(0)	1068013
16	33.7	0.0	0.0	chr13	71865169	71865221	(42499107)	+	(CA)n	Simple_repeat	1	53	(0)	1068014
1849	17.7	8.0	0.0	chr13	72739835	72740190	(41624138)	C	MER54A	LTR/ERVL	(475)	426	40	1069260
349	33.8	4.0	5.7	chr13	73744186	73744414	(40619914)	+	MIRc	SINE/MIR	4	228	(40)	1071021
289	27.7	10.5	0.8	chr13	74040216	74040335	(40323993)	C	L2a	LINE/L2	(5)	3421	3289	1071406
5945	17.3	5.0	0.9	chr13	74456349	74457337	(39906991)	+	L1MC2	LINE/L1	5317	6336	(8)	1071965
742	15.9	6.3	0.0	chr13	74457340	74457502	(39906826)	+	L1MB8	LINE/L1	1484	1657	(5860)	1071962
6972	15.6	0.5	0.2	chr13	74750170	74751303	(39613025)	+	LTR57-int	LTR/ERVL	3882	5019	(324)	1072365
1336	27.8	6.2	2.6	chr13	75184801	75185444	(39178884)	+	L1MD2	LINE/L1	290	1069	(5471)	1072945
590	25.5	0.6	1.2	chr13	76969426	76969588	(37394740)	C	L2a	LINE/L2	(1)	3425	3264	1075519
2324	11.9	6.2	0.0	chr13	77511625	77511959	(36852369)	+	LTR18A	LTR/ERVL	1	357	(0)	1076325
2376	9.1	0.0	2.8	chr13	77511960	77512176	(36852152)	+	AluSz	SINE/Alu	101	311	(1)	1076324
2393	13.6	4.4	3.5	chr13	79751900	79752327	(34612001)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1079379
15	5.6	0.0	0.0	chr13	80096706	80096724	(34267604)	+	(A)n	Simple_repeat	1	19	(0)	1079765
10568	6.8	10.9	0.1	chr13	80355363	80356770	(34007558)	+	LTR12C	LTR/ERV1	2	1579	(0)	1080232
7029	20.1	10.6	3.2	chr13	84961053	84962668	(29401660)	C	MER52A	LTR/ERV1	(1)	1754	4	1085922
3329	24.5	2.5	3.1	chr13	85093884	85094828	(29269500)	+	LTR53-int	LTR/ERVL	2134	3555	(1)	1086089
2022	11.3	9.2	4.9	chr13	87355329	87355744	(27008584)	C	LTR14B	LTR/ERVK	(0)	608	1	1088910
2032	11.5	10.6	3.5	chr13	93039429	93039797	(21324531)	+	LTR14B	LTR/ERVK	211	608	(0)	1096358
5538	7.2	2.7	0.8	chr13	93039798	93040549	(21323779)	+	HERVK14-int	LTR/ERVK	1	767	(5329)	1096358
294	21.4	8.0	4.6	chr13	93249894	93250001	(21114327)	C	LTR81B	LTR/Gypsy	(56)	1337	1226	1096633
18	0.0	0.0	0.0	chr13	94962775	94962794	(19401534)	+	(T)n	Simple_repeat	1	20	(0)	1099177
1710	21.6	4.3	2.2	chr13	95168819	95169273	(19195055)	+	MLT1C	LTR/ERVL-MaLR	3	467	(0)	1099505
2349	10.4	0.3	0.0	chr13	95237914	95238220	(19126108)	+	AluSz	SINE/Alu	2	309	(3)	1099614
241	32.0	2.8	1.0	chr13	95238345	95238448	(19125880)	C	MER5B	DNA/hAT-Charlie	(10)	168	63	1099615
1729	19.0	5.3	5.7	chr13	96020828	96021285	(18343043)	C	LTR40c	LTR/ERVL	(9)	456	1	1100994
827	28.4	17.4	1.9	chr13	96190536	96190962	(18173366)	C	L2a	LINE/L2	(7)	3419	2913	1101263
456	38.3	19.4	5.0	chr13	96191030	96191754	(18172574)	+	L2b	LINE/L2	2543	3375	(0)	1101261
2971	23.0	6.3	0.5	chr13	96402458	96403244	(17961084)	C	L1ME2	LINE/L1	(41)	6123	5288	1101567
1067	27.2	1.6	7.7	chr13	97582289	97582626	(16781702)	C	Arthur1B	DNA/hAT-Tip100	(908)	317	1	1103218
182	14.3	0.0	0.0	chr13	97582627	97582661	(16781667)	+	L2a	LINE/L2	3392	3426	(0)	1103219
248	29.9	9.3	1.7	chr13	98272603	98272721	(16091607)	+	MER117	DNA/hAT-Charlie	30	158	(39)	1104413
14	12.6	5.7	0.0	chr13	98576055	98576089	(15788239)	+	(GTCCCGG)n	Simple_repeat	1	37	(0)	1104829
12	14.6	0.0	5.9	chr13	98576268	98576301	(15788027)	+	(CCCG)n	Simple_repeat	1	34	(0)	1104830
2256	14.7	8.6	0.5	chr13	98724895	98725291	(15639037)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1105152
507	17.6	8.5	0.0	chr13	98742024	98742142	(15622186)	+	LTR75	LTR/ERVL	26	155	(407)	1105174
1080	26.6	13.0	2.1	chr13	98873407	98873836	(15490492)	+	MLT1J	LTR/ERVL-MaLR	14	497	(15)	1105334
248	30.5	4.8	0.0	chr13	98879173	98879290	(15485038)	+	LTR81A	LTR/Gypsy	907	1030	(320)	1105344
1795	20.2	13.6	2.5	chr13	99042742	99043224	(15321104)	+	LTR55	LTR/ERVL?	2	546	(2)	1105601
6598	18.2	3.8	1.1	chr13	99508924	99510380	(14853948)	C	MSTA-int	LTR/ERVL-MaLR	(17)	1563	1	1106372
1104	21.3	9.8	9.1	chr13	99830822	99831296	(14533032)	+	MLT1D	LTR/ERVL-MaLR	27	505	(0)	1106908
5122	14.8	2.0	5.6	chr13	100050878	100051712	(14312616)	C	MER4D	LTR/ERV1	(97)	806	1	1107287
15	9.2	8.6	0.0	chr13	100051826	100051860	(14312468)	+	(TATG)n	Simple_repeat	1	38	(0)	1107290
588	24.7	2.0	1.3	chr13	109421269	109421453	(4942875)	C	L1PA17	LINE/L1	(1)	6165	5969	1120032
13	6.4	2.5	9.8	chr13	110132768	110132807	(4231521)	+	(GGAGCCA)n	Simple_repeat	1	41	(0)	1120937
10206	12.1	8.0	0.3	chr13	111989973	111991475	(2372853)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	1123038
3515	10.0	1.6	1.8	chr13	112085517	112086026	(2278302)	C	MER1A	DNA/hAT-Charlie	(0)	529	21	1123150
3341	21.9	2.5	1.1	chr13	112129581	112130086	(2234242)	+	L1MA7	LINE/L1	5779	6290	(1)	1123205
4587	5.0	4.1	2.2	chr13	112578587	112578877	(1785451)	+	LTR14B	LTR/ERVK	309	608	(0)	1123648
751	22.5	9.8	1.5	chr13	112578878	112579100	(1785228)	+	L1MEf	LINE/L1	5382	5629	(908)	1123643
4987	16.0	5.6	4.3	chr13	112659237	112659868	(1704460)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(50)	1018	178	1123789
1401	21.8	10.0	0.5	chr13	112714768	112715173	(1649155)	C	L1MB3	LINE/L1	(3)	6180	5732	1123861
326	35.6	13.2	3.3	chr13	112849679	112849861	(1514467)	C	L2c	LINE/L2	(0)	3387	3172	1123991
13	15.6	2.0	7.8	chr13	113296931	113296980	(1067348)	+	(CTTCCT)n	Simple_repeat	1	51	(0)	1124474
281	17.4	4.3	3.2	chr13	113774499	113775247	(589081)	+	(CACACAC)n	Simple_repeat	1	781	(0)	1125020
254	24.5	9.7	5.6	chr14	18678199	18678306	(88365412)	+	MIR	SINE/MIR	81	193	(69)	1126047
967	27.2	8.1	6.7	chr14	18678523	18678828	(88364890)	+	L1ME4b	LINE/L1	3	173	(719)	1126048
876	26.7	5.5	9.1	chr14	18877005	18877296	(88166422)	+	L1ME4b	LINE/L1	3	131	(761)	1126151
2198	14.6	11.2	13.9	chr14	19349650	19350238	(87693480)	+	LTR4	LTR/ERV1	26	596	(0)	1126723
1639	19.8	1.0	2.8	chr14	19350282	19350599	(87693119)	C	AluJo	SINE/Alu	(0)	312	1	1126724
183	19.1	0.0	14.6	chr14	20613590	20613644	(86430074)	C	OldhAT1	DNA/hAT-Ac	(1703)	1145	1099	1128343
624	2.7	0.0	0.0	chr14	20613790	20613862	(86429856)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	1128344
17	19.0	1.6	6.5	chr14	24369166	24369226	(82674492)	+	(CCCCAG)n	Simple_repeat	1	62	(0)	1134159
1688	25.3	3.0	7.1	chr14	24705182	24705780	(82337938)	+	MLT1H1	LTR/ERVL-MaLR	4	564	(15)	1134559
14	24.3	1.5	6.1	chr14	28766590	28766596	(78277122)	+	(GCGG)n	Simple_repeat	1	61	(0)	1139686
12	21.8	1.9	5.6	chr14	28766597	28766649	(78277069)	+	G-rich	Low_complexity	1	54	(0)	1139687
699	25.4	9.3	0.0	chr14	30010480	30010644	(77033074)	+	Charlie17a	DNA/hAT-Charlie	35	216	(1)	1141276
10338	11.5	6.0	2.6	chr14	31329205	31329712	(75714006)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1053	1143424
2398	12.1	0.0	0.0	chr14	31329713	31330010	(75713708)	C	AluSg	SINE/Alu	(12)	298	1	1143426
2125	14.0	4.5	0.8	chr14	31750810	31751176	(75292542)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1144130
11028	11.2	3.4	0.2	chr14	31751181	31752755	(75290963)	C	THE1D-int	LTR/ERVL-MaLR	(4)	1627	1	1144131
1501	8.2	0.0	0.0	chr14	31961230	31961411	(75082307)	C	AluSc8	SINE/Alu	(13)	298	117	1144451
1165	15.1	3.1	0.0	chr14	31961415	31961600	(75082118)	C	MSTB	LTR/ERVL-MaLR	(234)	192	1	1144449
319	32.0	10.1	0.0	chr14	31961603	31961727	(75081991)	+	L3	LINE/CR1	2911	3049	(1050)	1144447
10065	18.3	1.2	1.6	chr14	31983947	31985258	(75058460)	C	L1PA16	LINE/L1	(5026)	1608	163	1144471
377	21.4	3.9	2.0	chr14	32161658	32161757	(74881961)	+	MLT1F	LTR/ERVL-MaLR	3	104	(444)	1144759
2147	11.3	2.3	0.3	chr14	32992873	32993172	(74050546)	+	AluSq2	SINE/Alu	1	306	(7)	1145861
310	31.9	9.1	6.0	chr14	32993173	32993301	(74050417)	C	L2	LINE/L2	(960)	2459	2330	1145860
1570	16.8	3.2	1.7	chr14	33443579	33443966	(73599752)	C	MER54B	LTR/ERVL	(491)	410	4	1146373
484	29.2	5.2	8.2	chr14	33785864	33786143	(73257575)	C	MLT1L	LTR/ERVL-MaLR	(229)	381	111	1146744
1544	0.0	0.0	0.0	chr14	34546714	34546877	(72496841)	+	U1	snRNA	1	164	(1)	1148059
1544	0.0	0.0	0.0	chr14	34556226	34556389	(72487329)	C	U1	snRNA	(1)	164	1	1148082
3578	20.6	10.1	4.5	chr14	35814176	35814436	(71229282)	C	Charlie1a	DNA/hAT-Charlie	(208)	1247	969	1150669
1365	14.1	4.3	1.4	chr14	35814437	35814659	(71229059)	C	L1PA16	LINE/L1	(9)	6157	5928	1150670
3578	20.6	10.1	4.5	chr14	35814660	35814947	(71228771)	C	Charlie1a	DNA/hAT-Charlie	(487)	968	652	1150669
882	28.9	11.0	1.9	chr14	36128696	36129154	(70914564)	+	LTR33	LTR/ERVL	2	503	(12)	1151192
1038	20.9	1.3	9.4	chr14	36129155	36129408	(70914310)	+	LTR16A1	LTR/ERVL	1	233	(223)	1151193
585	29.6	10.8	0.6	chr14	36129411	36129757	(70913961)	+	L1ME3Cz	LINE/L1	4689	5075	(1071)	1151194
214	35.5	6.0	0.9	chr14	36224281	36224391	(70819327)	C	MIRb	SINE/MIR	(1)	267	151	1151289
197	29.1	3.7	7.1	chr14	36224417	36224501	(70819217)	C	L2a	LINE/L2	(3)	3423	3342	1151290
14	19.1	0.0	2.6	chr14	37591932	37591969	(69451749)	+	(GCTCCC)n	Simple_repeat	1	38	(0)	1153166
2578	7.2	6.7	0.3	chr14	38461728	38462103	(68581615)	C	L1PA11	LINE/L1	(3)	6171	5770	1154279
4897	26.4	3.3	1.7	chr14	38616686	38618989	(68424729)	+	L1PA15-16	LINE/L1	25	1872	(5290)	1154460
11240	8.3	2.2	2.2	chr14	39140955	39142148	(67901570)	C	THE1A-int	LTR/ERVL-MaLR	(5)	1575	365	1155210
1348	17.8	4.0	0.0	chr14	39534136	39534373	(67509345)	+	MER31A	LTR/ERV1	152	399	(86)	1155856
2813	12.9	6.5	0.0	chr14	39534374	39534823	(67508895)	C	MER9a3	LTR/ERVK	(0)	512	32	1155857
28	23.1	0.0	3.7	chr14	44897468	44897548	(62146170)	+	(GGC)n	Simple_repeat	1	81	(0)	1162310
828	10.6	0.0	0.0	chr14	45271927	45272039	(61771679)	C	L1MC1	LINE/L1	(17)	6316	6204	1162964
4658	22.4	10.1	8.8	chr14	51468341	51468917	(55574801)	C	L1ME1	LINE/L1	(1719)	4427	3852	1171517
13	25.5	3.1	7.1	chr14	53946722	53946817	(53096901)	+	G-rich	Low_complexity	1	99	(0)	1175250
54	0.0	0.0	0.0	chr14	54344373	54344418	(52699300)	+	(AC)n	Simple_repeat	1	46	(0)	1175794
1309	23.6	7.6	8.7	chr14	54344420	54345253	(52698465)	+	L2a	LINE/L2	2587	3426	(0)	1175795
2095	13.9	1.6	0.7	chr14	54597585	54597886	(52445832)	C	AluJb	SINE/Alu	(7)	305	1	1176201
15	13.4	2.9	2.8	chr14	55051679	55051713	(51992005)	+	(GCT)n	Simple_repeat	1	36	(0)	1176946
50	33.1	1.9	1.4	chr14	55372527	55372737	(51670981)	+	(CTCC)n	Simple_repeat	1	215	(0)	1177563
9032	10.8	10.2	1.9	chr14	58833756	58835200	(48208518)	+	LTR12C	LTR/ERV1	2	1579	(0)	1182877
433	29.1	2.5	0.8	chr14	58835252	58835369	(48208349)	+	MIRb	SINE/MIR	139	258	(10)	1182878
1253	29.8	13.2	4.5	chr14	59467460	59468106	(47575612)	+	L2c	LINE/L2	2126	2853	(566)	1183745
2450	27.4	6.8	2.8	chr14	60958133	60958622	(46085096)	C	L1M1	LINE/L1	(4524)	3041	2531	1185802
11137	10.9	2.0	1.5	chr14	61373903	61375447	(45668271)	C	MSTA-int	LTR/ERVL-MaLR	(85)	1546	1	1186425
652	32.0	8.8	4.1	chr14	61558066	61558276	(45485442)	+	L3	LINE/CR1	3792	4015	(84)	1186672
388	28.8	4.6	0.0	chr14	65107454	65107578	(41936140)	C	LTR33	LTR/ERVL	(2)	513	383	1192425
230	23.2	4.2	5.5	chr14	65107807	65107879	(41935839)	C	LTR16D2	LTR/ERVL	(273)	299	228	1192426
2096	17.0	5.9	1.0	chr14	67917181	67917583	(39126135)	C	MSTA	LTR/ERVL-MaLR	(4)	424	1	1196943
1315	26.5	4.5	4.5	chr14	67917584	67917870	(39125848)	C	L2a	LINE/L2	(713)	2706	2409	1196942
30	5.5	0.0	0.0	chr14	68548294	68548331	(38495387)	+	(GCCCA)n	Simple_repeat	1	38	(0)	1197866
1184	25.6	2.4	0.6	chr14	68581171	68581505	(38462213)	+	MER47B	DNA/TcMar-Tigger	31	418	(0)	1197924
312	13.1	0.0	0.0	chr14	68844264	68844324	(38199394)	C	L1MA4	LINE/L1	(0)	6300	6240	1198345
208	36.2	2.3	7.6	chr14	68924494	68924678	(38119040)	C	L2c	LINE/L2	(497)	2922	2748	1198489
8247	7.9	15.5	14.6	chr14	70255024	70256182	(36787536)	+	LTR12C	LTR/ERV1	446	1579	(0)	1200924
10937	16.9	2.9	1.5	chr14	70496422	70498643	(36545075)	+	L1PA12	LINE/L1	5	2820	(4161)	1201270
11444	9.6	3.5	1.8	chr14	70537061	70538797	(36504921)	+	LTR19-int	LTR/ERV1	1	1768	(3818)	1201312
7168	21.1	4.5	3.1	chr14	70566992	70570112	(36473606)	+	L1PA17	LINE/L1	568	3565	(3350)	1201344
16	0.0	0.0	0.0	chr14	70735367	70735383	(36308335)	+	(T)n	Simple_repeat	1	17	(0)	1201645
10459	11.1	3.8	0.4	chr14	70943153	70944673	(36099045)	+	THE1C-int	LTR/ERVL-MaLR	1	1574	(6)	1202016
2251	12.2	0.0	0.0	chr14	71120277	71120579	(35923139)	+	AluSq2	SINE/Alu	2	304	(9)	1202229
4315	26.9	10.6	6.7	chr14	71132407	71134206	(35909512)	C	ERV3-16A3_I-int	LTR/ERVL	(540)	4686	2808	1202238
10388	12.0	3.0	1.6	chr14	71268585	71270141	(35773577)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	1202515
3735	13.6	6.1	0.3	chr14	71328779	71329427	(35714291)	C	L1MB2	LINE/L1	(7)	6164	5476	1202631
1606	16.0	16.4	5.0	chr14	71989910	71990311	(35053407)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	1203622
2272	17.4	3.4	0.2	chr14	73422491	73422888	(33620830)	C	MSTB	LTR/ERVL-MaLR	(15)	411	1	1206225
16	0.0	0.0	0.0	chr14	73422909	73422925	(33620793)	+	(A)n	Simple_repeat	1	17	(0)	1206226
378	28.5	17.2	3.5	chr14	73422944	73423143	(33620575)	C	MIRc	SINE/MIR	(33)	235	3	1206227
2218	9.9	3.2	0.0	chr14	73538696	73539010	(33504708)	+	AluSq2	SINE/Alu	1	313	(0)	1206509
14	15.6	4.4	8.4	chr14	73539181	73539248	(33504470)	+	(TGCTGCC)n	Simple_repeat	1	71	(0)	1206510
4885	11.3	9.1	3.5	chr14	73589719	73590989	(33452729)	C	LTR12C	LTR/ERV1	(20)	1234	1	1206632
288	32.4	11.7	6.9	chr14	73940370	73940744	(33102974)	+	L2b	LINE/L2	2975	3369	(6)	1207431
438	25.9	9.2	0.6	chr14	74401806	74401964	(32641754)	+	MIR3	SINE/MIR	27	200	(8)	1208460
498	28.3	4.2	4.2	chr14	74402156	74402347	(32641371)	+	MamRep38	DNA/hAT	104	295	(0)	1208461
277	26.3	1.3	3.8	chr14	74573240	74573318	(32470400)	+	MIRb	SINE/MIR	113	189	(79)	1208760
1338	26.4	15.5	0.7	chr14	74573325	74573759	(32469959)	+	LTR33	LTR/ERVL	1	511	(4)	1208761
2476	15.7	0.5	1.0	chr14	75347031	75347428	(31696290)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1210267
290	32.5	10.3	0.6	chr14	75347437	75347603	(31696115)	C	L4_C_Mam	LINE/RTE-X	(4069)	1069	885	1210263
579	15.5	0.0	6.8	chr14	75551657	75551759	(31491959)	+	AluJo	SINE/Alu	205	300	(12)	1210685
2331	5.5	9.7	0.0	chr14	79736538	79736846	(27306872)	C	LTR14A	LTR/ERVK	(0)	344	3	1218248
2284	15.0	4.5	2.4	chr14	81317041	81317381	(25726337)	C	MSTB	LTR/ERVL-MaLR	(71)	355	6	1220447
2666	15.8	1.4	1.4	chr14	81328599	81329028	(25714690)	+	MSTB1	LTR/ERVL-MaLR	1	430	(2)	1220467
2033	19.5	1.4	6.6	chr14	87594033	87594488	(19449230)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1229213
1779	24.8	8.6	5.8	chr14	87673793	87673948	(19369770)	C	L1MC3	LINE/L1	(217)	7568	7399	1229316
1701	15.9	4.1	0.0	chr14	87673949	87674274	(19369444)	C	L1MC1	LINE/L1	(0)	6333	5994	1229318
2322	25.5	2.4	4.7	chr14	88807608	88808413	(18235305)	+	L1MCc	LINE/L1	649	1435	(4988)	1230991
525	6.8	1.4	0.0	chr14	88808415	88808487	(18235231)	+	MLT2B1	LTR/ERVL	1	74	(441)	1230992
251	27.1	10.1	7.6	chr14	90557287	90557470	(16486248)	+	MIR3	SINE/MIR	17	205	(3)	1234140
918	28.0	4.4	2.1	chr14	91907099	91907454	(15136264)	+	MLT1J	LTR/ERVL-MaLR	63	444	(0)	1236510
2076	14.9	0.0	2.8	chr14	92176123	92176443	(14867275)	C	AluJb	SINE/Alu	(0)	312	1	1237034
275	27.3	11.0	2.4	chr14	92176445	92176568	(14867150)	+	L3	LINE/CR1	3607	3742	(357)	1237032
17	19.1	7.2	2.7	chr14	92179641	92179709	(14864009)	+	GA-rich	Low_complexity	1	74	(0)	1237042
4175	22.4	11.2	2.5	chr14	92244235	92245592	(14798126)	C	MSTB1-int	LTR/ERVL-MaLR	(0)	1580	49	1237171
2076	10.4	0.7	7.6	chr14	92359296	92359611	(14684107)	+	AluSx3	SINE/Alu	3	296	(15)	1237418
846	26.2	14.7	6.2	chr14	92359622	92359914	(14683804)	C	L1ME3B	LINE/L1	(28)	6214	5905	1237419
971	27.1	8.3	13.8	chr14	92536966	92537627	(14506091)	C	L1ME4b	LINE/L1	(3)	889	267	1237731
1860	9.4	0.4	8.5	chr14	92537635	92537824	(14505894)	C	AluSx	SINE/Alu	(0)	312	143	1237732
671	26.9	15.8	1.7	chr14	92552528	92552943	(14490775)	+	L2a	LINE/L2	2923	3408	(18)	1237767
241	33.2	7.7	4.5	chr14	94126497	94126783	(12916935)	+	L2c	LINE/L2	3054	3350	(37)	1240668
2277	16.1	5.2	0.5	chr14	94126811	94127216	(12916502)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1240669
1724	11.6	2.6	0.3	chr14	94716414	94716750	(12326968)	+	MER1A	DNA/hAT-Charlie	16	402	(127)	1241645
22	23.1	5.6	2.1	chr14	94716751	94716756	(12326962)	+	(TATATCA)n	Simple_repeat	1	32	(63)	1241646
18	21.2	5.3	3.8	chr14	94716757	94716832	(12326886)	+	(ATATC)n	Simple_repeat	1	80	(0)	1241647
2625	20.8	2.3	2.3	chr14	95246767	95246852	(11796866)	+	MER74A	LTR/ERVL	482	558	(0)	1242660
360	35.6	2.2	0.0	chr14	95753145	95753321	(11290397)	+	MIRb	SINE/MIR	11	191	(77)	1243649
5732	9.3	2.2	0.9	chr14	96073350	96074204	(10969514)	+	L1PA11	LINE/L1	5307	6172	(2)	1244202
1835	14.2	1.0	3.3	chr14	96233032	96233333	(10810385)	C	AluJb	SINE/Alu	(17)	295	1	1244506
439	23.4	7.9	4.1	chr14	96233334	96233439	(10810279)	C	MER39	LTR/ERV1	(165)	542	422	1244505
3086	19.0	9.7	7.5	chr14	97000001	97001139	(10042579)	C	MER52C	LTR/ERV1	(440)	1683	326	1245884
231	32.9	14.4	0.0	chr14	97047985	97048121	(9995597)	C	MIR3	SINE/MIR	(3)	205	46	1245971
180	40.5	1.3	0.0	chr14	97048089	97048162	(9995556)	C	MIR1_Amn	SINE/MIR	(147)	83	9	1245972
1090	20.2	11.2	7.7	chr14	97048165	97048475	(9995243)	+	MER58B	DNA/hAT-Charlie	19	341	(0)	1245973
273	33.3	8.5	4.5	chr14	97052962	97053240	(9990478)	C	L2b	LINE/L2	(70)	3317	3000	1245984
1029	23.2	4.6	0.4	chr14	97429788	97430016	(9613702)	C	MLT1A1	LTR/ERVL-MaLR	(169)	239	1	1246701
1405	23.4	3.5	1.2	chr14	97719105	97719442	(9324276)	C	MLT1A0	LTR/ERVL-MaLR	(19)	346	1	1247164
1834	20.7	1.6	0.0	chr14	97719443	97719799	(9323919)	C	MLT1A0-int	LTR/ERVL-MaLR	(0)	1735	1373	1247164
3089	18.8	4.1	0.2	chr14	98804572	98805156	(8238562)	+	L1MB3	LINE/L1	5575	6183	(0)	1248975
504	25.8	10.6	1.9	chr14	98913155	98913390	(8130328)	+	MIR	SINE/MIR	5	230	(0)	1249178
364	33.1	9.1	1.7	chr14	99027665	99027836	(8015882)	C	MIRc	SINE/MIR	(39)	229	44	1249369
415	29.2	2.8	6.8	chr14	99782197	99782366	(7261352)	+	MIRb	SINE/MIR	6	173	(95)	1250622
217	27.6	4.5	6.2	chr14	99782425	99782536	(7261182)	+	L2c	LINE/L2	3264	3373	(14)	1250623
248	27.3	0.0	3.8	chr14	100155176	100155255	(6888463)	+	Tigger16a	DNA/TcMar-Tigger	126	202	(755)	1251289
851	27.5	17.0	1.5	chr14	100222311	100222772	(6820946)	C	LTR67B	LTR/ERVL	(31)	589	42	1251466
1492	24.7	6.2	1.7	chr14	100422020	100422500	(6621218)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	76	1251838
2188	21.4	20.3	0.7	chr14	100645427	100646041	(6397677)	C	LTR41	LTR/ERVL	(0)	768	2	1252207
3153	7.9	4.5	0.2	chr14	100763214	100763655	(6280063)	C	MER1A	DNA/hAT-Charlie	(0)	529	68	1252368
3493	19.3	4.7	2.4	chr14	101339029	101340019	(5703699)	C	MER49	LTR/ERV1	(10)	913	1	1253016
1919	15.5	0.3	0.3	chr14	101773702	101773992	(5269726)	C	AluJr	SINE/Alu	(19)	293	3	1253631
419	28.5	11.2	13.7	chr14	101773993	101774130	(5269588)	C	L2a	LINE/L2	(530)	2889	2722	1253630
688	20.3	5.2	0.0	chr14	101813295	101813422	(5230296)	C	MER58A	DNA/hAT-Charlie	(86)	138	4	1253689
483	18.2	6.7	3.1	chr14	102524748	102524877	(4518841)	+	MLT1M	LTR/ERVL-MaLR	121	255	(417)	1255087
1260	17.4	10.5	1.8	chr14	102819665	102819950	(4223768)	C	MER46C	DNA/TcMar-Tigger	(24)	314	1	1255767
181	27.3	11.5	0.0	chr14	102819953	102820029	(4223689)	C	L2b	LINE/L2	(21)	3354	3268	1255768
404	11.9	0.0	0.0	chr14	103014818	103014876	(4028842)	+	AluSz6	SINE/Alu	244	302	(10)	1256037
427	22.9	9.1	3.4	chr14	103319439	103319614	(3724104)	C	MER112	DNA/hAT-Charlie	(6)	255	69	1256553
810	23.2	4.2	1.0	chr14	103319621	103319829	(3723889)	+	L1MC1	LINE/L1	6098	6313	(20)	1256554
2180	9.8	0.0	0.3	chr14	103319850	103320146	(3723572)	C	AluSq2	SINE/Alu	(17)	296	1	1256555
214	19.6	8.2	5.1	chr14	103855889	103855947	(3187771)	+	L2c	LINE/L2	3331	3409	(17)	1257654
3349	18.0	4.3	2.1	chr14	104259500	104260156	(2783562)	+	L1MCa	LINE/L1	2	673	(5835)	1258239
3717	22.9	10.6	1.8	chr14	104329579	104330330	(2713388)	+	MLT1H-int	LTR/ERVL-MaLR	339	1162	(247)	1258302
6552	13.2	3.5	0.6	chr14	104330331	104331505	(2712213)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1208	1258305
1497	20.4	6.7	4.1	chr14	104380075	104380438	(2663280)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	1258369
576	33.4	7.2	4.4	chr14	104380439	104380559	(2663159)	+	L1MEc	LINE/L1	586	700	(5700)	1258368
1922	26.5	8.1	3.8	chr14	104625967	104626343	(2417375)	+	L1MC4a	LINE/L1	5640	6055	(1895)	1258600
2209	13.8	8.7	2.5	chr14	104626344	104626744	(2416974)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1258615
22	16.2	2.0	2.0	chr14	104677815	104677864	(2365854)	+	(CCT)n	Simple_repeat	1	51	(0)	1258705
13	13.2	6.1	0.0	chr14	104882458	104882490	(2161228)	+	(CAGG)n	Simple_repeat	1	35	(0)	1258962
1212	23.3	10.7	0.9	chr14	105043504	105043849	(1999869)	+	LTR40a	LTR/ERVL	132	515	(4)	1259155
21	5.0	7.0	2.2	chr14	105415231	105415273	(1628445)	+	(CGCGGGG)n	Simple_repeat	1	46	(0)	1259656
1559	8.2	0.0	0.5	chr14	105431168	105431363	(1612355)	C	AluSx1	SINE/Alu	(117)	195	1	1259685
388	20.6	7.4	0.0	chr14	105431368	105431493	(1612225)	+	L1MD	LINE/L1	3199	3334	(2812)	1259686
857	21.2	0.5	7.6	chr14	105431494	105431617	(1612101)	+	Cheshire	DNA/hAT-Charlie	1170	1288	(1132)	1259687
2259	12.7	0.0	0.0	chr14	105431618	105431925	(1611793)	C	AluSx	SINE/Alu	(4)	308	1	1259688
18	23.5	4.1	2.6	chr14	106790430	106790502	(253216)	+	A-rich	Low_complexity	1	76	(0)	1261072
246	35.1	13.3	2.3	chr15	25413729	25414215	(76576974)	+	L2	LINE/L2	1974	2522	(897)	1269960
2364	9.7	0.0	0.0	chr15	29015977	29016285	(72974904)	+	AluSc5	SINE/Alu	1	309	(0)	1274875
3536	13.1	1.7	0.2	chr15	29780064	29780584	(72210605)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	1276002
2208	12.7	3.8	0.6	chr15	35435414	35435747	(66555442)	+	MER61C	LTR/ERV1	84	428	(0)	1284353
566	25.9	1.8	7.8	chr15	35435748	35435927	(66555262)	+	HUERS-P3b-int	LTR/ERV1	2	170	(5047)	1284353
1304	22.8	4.0	3.8	chr15	38307269	38307641	(63683548)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	1288107
4018	10.9	9.3	1.1	chr15	38523296	38523955	(63467234)	+	Tigger3b	DNA/TcMar-Tigger	487	1206	(25)	1288454
440	33.4	11.5	4.6	chr15	38524091	38524103	(63467086)	C	L2	LINE/L2	(1043)	2376	2365	1288452
2277	11.0	1.4	2.4	chr15	39226458	39226830	(62764359)	+	THE1C	LTR/ERVL-MaLR	1	369	(6)	1289414
3662	16.2	7.1	1.9	chr15	39226869	39227591	(62763598)	C	MER21C	LTR/ERVL	(175)	763	1	1289413
2178	16.1	8.2	0.3	chr15	39836207	39836598	(62154591)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1290247
10797	8.7	7.2	0.3	chr15	40013786	40015255	(61975934)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1290527
646	28.4	4.0	0.6	chr15	40039382	40039609	(61951580)	+	MIR	SINE/MIR	28	262	(0)	1290566
18	10.5	0.0	0.0	chr15	41496357	41496387	(60494802)	+	(CTGC)n	Simple_repeat	1	31	(0)	1293497
152	6.7	0.0	0.5	chr15	44288396	44288599	(57702590)	+	(GAGA)n	Simple_repeat	1	204	(0)	1298571
63138	4.2	0.4	0.2	chr15	45235064	45242440	(56748749)	C	HERVK14C-int	LTR/ERVK	(0)	7434	47	1300294
680	14.4	1.6	4.5	chr15	45242441	45242486	(56748703)	C	AluSx	SINE/Alu	(183)	129	89	1300295
4884	5.5	0.2	0.2	chr15	45242487	45243073	(56748116)	C	LTR14C	LTR/ERVK	(0)	587	1	1300296
305	32.0	7.4	3.0	chr15	45454929	45455160	(56536029)	C	LTR101_Mam	LTR/ERVL	(537)	292	50	1300694
6323	23.3	1.0	1.9	chr15	49225624	49226525	(52764664)	C	L1P4a	LINE/L1	(5596)	907	7	1305992
655	29.3	4.3	2.8	chr15	50271471	50271719	(51719470)	C	MIRb	SINE/MIR	(14)	254	2	1307393
2580	8.5	11.0	0.7	chr15	51282244	51282688	(50708501)	+	LTR14B	LTR/ERVK	1	608	(0)	1309325
6243	5.8	1.0	0.1	chr15	51282689	51283461	(50707728)	+	HERVK14-int	LTR/ERVK	1	780	(5316)	1309325
334	27.5	19.8	0.0	chr15	55825373	55825510	(46165679)	+	MIRb	SINE/MIR	81	252	(16)	1316272
188	28.4	5.8	3.6	chr15	55825682	55825765	(46165424)	C	L2c	LINE/L2	(59)	3328	3243	1316273
4481	6.9	4.0	0.0	chr15	58113244	58113824	(43877365)	C	LTR14B	LTR/ERVK	(0)	608	4	1319642
616	26.0	2.4	4.0	chr15	58124609	58124924	(43866265)	C	MLT2F	LTR/ERVL	(259)	404	46	1319664
2722	19.3	15.3	1.2	chr15	58270015	58270659	(43720530)	+	LTR41B	LTR/ERVL	6	757	(1)	1319877
3142	12.8	5.1	2.7	chr15	58413341	58413852	(43577337)	+	MER1A	DNA/hAT-Charlie	1	525	(4)	1320122
1692	13.6	13.0	1.7	chr15	58558470	58558769	(43432420)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1320391
6880	9.3	2.4	1.1	chr15	58833342	58834296	(43156893)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	1320919
1893	19.7	9.0	6.7	chr15	58957173	58957436	(43033753)	C	MLT1F	LTR/ERVL-MaLR	(70)	478	204	1321156
1082	18.1	3.7	7.9	chr15	58957437	58957664	(43033525)	C	MER20	DNA/hAT-Charlie	(1)	218	1	1321158
1893	19.7	9.0	6.7	chr15	58957665	58957861	(43033328)	C	MLT1F	LTR/ERVL-MaLR	(345)	203	2	1321156
3317	12.8	3.8	1.4	chr15	59016708	59017223	(42973966)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1321305
16	23.0	0.0	0.0	chr15	59992351	59992388	(41998801)	+	GA-rich	Low_complexity	1	38	(0)	1323092
2973	19.7	12.6	4.0	chr15	60061295	60062041	(41929148)	+	LTR8B	LTR/ERV1	1	820	(0)	1323191
225	22.2	12.9	0.0	chr15	60758164	60758217	(41232972)	+	L2b	LINE/L2	3293	3354	(21)	1324277
1056	27.4	4.8	5.7	chr15	60758357	60758774	(41232415)	C	CR1_Mam	LINE/CR1	(1210)	994	581	1324280
12	8.8	4.2	0.0	chr15	60759292	60759315	(41231874)	+	(ACAT)n	Simple_repeat	1	25	(0)	1324282
286	30.1	16.2	7.5	chr15	61937916	61938597	(40052592)	+	MamRep1527	LTR	4	756	(213)	1326113
12050	7.5	0.6	0.7	chr15	62216526	62216710	(39774479)	C	HERVK14-int	LTR/ERVK	(5911)	185	2	1326530
2231	7.9	0.6	17.4	chr15	62216712	62217124	(39774065)	C	LTR14A	LTR/ERVK	(1)	343	1	1326530
3976	12.9	0.5	4.4	chr15	62269578	62270210	(39720979)	C	LTR14B	LTR/ERVK	(0)	608	1	1326606
222	35.1	0.0	0.0	chr15	62906720	62906796	(39084393)	C	L2b	LINE/L2	(185)	3190	3114	1327599
17	4.0	0.0	3.6	chr15	63932531	63932558	(38058631)	+	(TTTA)n	Simple_repeat	1	28	(0)	1329419
608	28.8	4.3	3.0	chr15	63932782	63933078	(38058111)	C	L1ME3E	LINE/L1	(293)	5949	5649	1329420
8463	10.8	11.0	1.7	chr15	65300211	65301637	(36689552)	C	LTR12C	LTR/ERV1	(0)	1579	3	1332337
329	31.2	11.4	0.8	chr15	65517022	65517261	(36473928)	+	MIRc	SINE/MIR	10	260	(8)	1332810
815	17.8	8.6	7.7	chr15	65529843	65529979	(36461210)	C	MER3	DNA/hAT-Charlie	(64)	145	1	1332843
276	26.7	13.0	7.4	chr15	65530012	65530187	(36461002)	+	L2b	LINE/L2	3183	3408	(18)	1332845
1553	13.4	1.3	11.9	chr15	66082517	66082690	(35908499)	+	AluSx	SINE/Alu	134	300	(12)	1333952
12	10.3	6.1	2.9	chr15	66766185	66766217	(35224972)	+	G-rich	Low_complexity	1	35	(0)	1335414
230	20.1	1.9	6.1	chr15	67106836	67106907	(34884282)	C	UCON132b	DNA/hAT-Tip100	(1)	147	89	1336085
269	23.4	2.9	3.0	chr15	67107067	67107155	(34884034)	+	L2a	LINE/L2	3290	3425	(1)	1336086
624	17.1	16.4	3.7	chr15	67198364	67198527	(34792662)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	1336234
1985	16.4	0.0	2.5	chr15	67514979	67515296	(34475893)	+	AluJb	SINE/Alu	2	311	(1)	1336739
522	23.4	6.0	8.1	chr15	67515325	67515547	(34475642)	C	L1ME3A	LINE/L1	(38)	6135	5918	1336738
1044	11.7	6.3	4.8	chr15	67515549	67515736	(34475453)	+	AluJo	SINE/Alu	96	286	(26)	1336740
714	30.4	12.9	2.8	chr15	67926699	67927087	(34064102)	+	MLT1J	LTR/ERVL-MaLR	77	510	(2)	1337398
294	31.9	10.1	0.6	chr15	67932960	67933120	(34058069)	+	ERV3-16A3_I-int	LTR/ERVL	12	189	(4807)	1337413
226	19.7	1.4	10.1	chr15	67933156	67933234	(34057955)	+	MER34A	LTR/ERV1	67	138	(433)	1337414
1551	20.4	13.3	1.6	chr15	67933209	67933637	(34057552)	+	MER39	LTR/ERV1	221	707	(0)	1337415
2541	13.7	2.6	1.2	chr15	67973971	67974390	(34016799)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1337497
14	25.1	2.1	0.0	chr15	68229352	68229398	(33761791)	+	(CGCCC)n	Simple_repeat	1	48	(0)	1337960
660	23.3	13.8	1.9	chr15	68438324	68438533	(33552656)	C	MIRb	SINE/MIR	(10)	258	20	1338342
194	25.0	25.7	0.0	chr15	68438575	68438710	(33552479)	C	L2b	LINE/L2	(151)	3236	3054	1338334
202	21.3	3.8	10.7	chr15	68616370	68616453	(33374736)	C	MIR1_Amn	SINE/MIR	(67)	163	86	1338675
397	27.8	13.4	2.1	chr15	68616970	68617160	(33374029)	C	MIRb	SINE/MIR	(50)	218	3	1338676
3356	10.3	6.9	0.4	chr15	69007652	69008127	(32983062)	+	LTR10F	LTR/ERV1	1	509	(2)	1339435
25192	12.9	6.4	6.1	chr15	69008128	69008631	(32982558)	C	MER57A-int	LTR/ERV1	(4450)	1737	1321	1339433
14	15.9	2.9	0.0	chr15	69067159	69067193	(32923996)	+	(CCACTTG)n	Simple_repeat	1	36	(0)	1339556
302	35.3	9.7	4.7	chr15	69148341	69148723	(32842466)	C	L2c	LINE/L2	(74)	3313	2910	1339726
1909	27.7	8.4	2.4	chr15	69157652	69158242	(32832947)	+	MER115	DNA/hAT-Tip100	52	681	(12)	1339738
1035	24.9	6.4	2.0	chr15	69321255	69321611	(32669578)	C	L1MC5	LINE/L1	(1)	9303	8930	1339994
240	14.2	0.0	0.0	chr15	69709473	69709514	(32281675)	+	MIRc	SINE/MIR	107	148	(60)	1340760
430	23.9	5.0	0.0	chr15	70003072	70003184	(31988005)	+	LTR67B	LTR/ERVL	76	194	(426)	1341302
272	34.3	7.7	0.8	chr15	70269943	70270163	(31721026)	+	MIRb	SINE/MIR	19	261	(7)	1341827
191	19.4	0.0	0.0	chr15	70270285	70270320	(31720869)	C	MIRc	SINE/MIR	(16)	252	217	1341828
247	33.3	10.7	1.4	chr15	70488396	70488614	(31502575)	C	MIRc	SINE/MIR	(8)	260	19	1342243
11019	8.1	3.4	1.0	chr15	70586192	70587730	(31403459)	C	LTR12C	LTR/ERV1	(0)	1579	3	1342428
310	30.8	6.2	2.9	chr15	71698108	71698289	(30292900)	C	L2c	LINE/L2	(3)	3372	3190	1344190
952	19.6	5.6	1.4	chr15	72721997	72722203	(29268986)	C	MER58A	DNA/hAT-Charlie	(0)	224	9	1345999
20	6.8	0.0	0.0	chr15	73026688	73026718	(28964471)	+	(TTTGA)n	Simple_repeat	1	31	(0)	1346481
1943	15.7	0.0	0.7	chr15	73027010	73027303	(28963886)	C	AluJb	SINE/Alu	(20)	292	1	1346482
2463	13.2	6.1	0.2	chr15	73181406	73181808	(28809381)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1346737
8121	9.8	15.2	0.7	chr15	73731363	73732696	(28258493)	C	LTR12C	LTR/ERV1	(0)	1579	17	1347622
2406	7.7	0.7	0.0	chr15	74776302	74776598	(27214591)	+	AluSg	SINE/Alu	1	299	(11)	1349506
330	23.3	10.7	3.3	chr15	74776599	74776646	(27214543)	C	MIR3	SINE/MIR	(154)	76	23	1349505
200	33.6	2.7	6.1	chr15	74783412	74783525	(27207664)	C	MIR3	SINE/MIR	(25)	183	74	1349518
2413	9.1	0.0	0.0	chr15	74872131	74872428	(27118761)	+	AluSx	SINE/Alu	1	298	(14)	1349664
6174	16.0	7.2	0.5	chr15	74882141	74883193	(27107996)	C	LTR28C	LTR/ERV1	(0)	1129	1	1349693
951	24.8	9.7	5.6	chr15	74889338	74889909	(27101280)	+	L2a	LINE/L2	2817	3426	(0)	1349709
10215	5.6	12.7	0.7	chr15	75115126	75116511	(26874678)	C	LTR12C	LTR/ERV1	(0)	1579	2	1350210
18	26.4	0.0	7.7	chr15	75651962	75651990	(26339199)	+	(TCCTCT)n	Simple_repeat	1	68	(23)	1351308
313	33.0	7.0	6.1	chr15	75713456	75713652	(26277537)	C	MIRc	SINE/MIR	(68)	200	2	1351392
2522	6.1	0.0	0.0	chr15	75741001	75741296	(26249893)	+	AluY	SINE/Alu	1	296	(15)	1351439
2680	25.7	5.3	2.7	chr15	76002171	76003363	(25987826)	+	L1MEg	LINE/L1	3125	4347	(3107)	1351855
1952	9.0	0.3	23.3	chr15	76269234	76269680	(25721509)	+	LTR14A	LTR/ERVK	1	344	(0)	1352289
473	15.9	5.7	0.0	chr15	76269681	76269803	(25721386)	+	L1MEf	LINE/L1	4678	4805	(2130)	1352274
6139	22.4	3.5	6.5	chr15	76552312	76554785	(25436404)	+	L1PA15	LINE/L1	1388	3832	(4323)	1352759
10012	11.4	7.6	0.3	chr15	77235190	77236699	(24754490)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	1353742
2060	11.0	14.6	0.9	chr15	78712785	78713208	(23277981)	+	LTR14B	LTR/ERVK	1	608	(0)	1356465
2543	26.8	7.2	3.3	chr15	78713223	78714272	(23276917)	C	HAL1	LINE/L1	(110)	2397	1304	1356466
372	24.4	1.1	1.1	chr15	79179268	79179354	(22811835)	+	MIRc	SINE/MIR	99	185	(83)	1357393
12	27.4	0.0	0.0	chr15	79570121	79570157	(22421032)	+	GA-rich	Low_complexity	1	37	(0)	1358048
943	29.4	14.3	0.8	chr15	80377814	80378714	(21612475)	C	L2a	LINE/L2	(0)	3426	2371	1359437
239	30.4	0.0	0.0	chr15	80660202	80660257	(21330932)	C	MLT1K	LTR/ERVL-MaLR	(488)	184	129	1359874
2007	11.4	1.0	5.6	chr15	81012326	81012631	(20978558)	C	AluSg	SINE/Alu	(17)	293	2	1360533
211	28.2	11.3	0.0	chr15	81012884	81012993	(20978196)	+	L2c	LINE/L2	3263	3386	(1)	1360534
1720	16.2	2.0	2.7	chr15	81102386	81102681	(20888508)	+	AluJo	SINE/Alu	1	294	(18)	1360713
2551	15.7	5.9	0.5	chr15	81235190	81235592	(20755597)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1360958
1073	19.2	17.4	11.3	chr15	81838816	81839178	(20152011)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	1361885
2515	9.0	0.0	0.7	chr15	81948996	81949295	(20041894)	+	AluSx	SINE/Alu	1	298	(14)	1362081
285	22.1	4.2	7.4	chr15	81949533	81949632	(20041557)	+	MIR3	SINE/MIR	87	182	(26)	1362082
232	31.0	8.1	0.9	chr15	82330240	82330353	(19660836)	C	L2a	LINE/L2	(22)	3404	3282	1362716
2126	9.6	2.8	0.4	chr15	82921016	82921295	(19069894)	+	AluSx	SINE/Alu	4	290	(22)	1363680
271	34.0	14.0	2.1	chr15	83551906	83552193	(18438996)	+	L2c	LINE/L2	3034	3361	(26)	1364793
309	28.3	8.3	0.5	chr15	83552277	83552490	(18438699)	C	L1MEi	LINE/L1	(3124)	3022	2787	1364795
11551	8.7	1.1	0.8	chr15	83756589	83758162	(18233027)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1365091
2166	13.6	0.0	0.3	chr15	84624074	84624381	(17366808)	+	AluSx1	SINE/Alu	6	312	(0)	1366292
2320	11.4	1.0	0.0	chr15	85172079	85172386	(16818803)	+	AluSc8	SINE/Alu	1	311	(0)	1367361
232	31.0	8.1	0.9	chr15	85259657	85259770	(16731419)	+	L2b	LINE/L2	3282	3404	(22)	1367490
20065	13.0	6.2	2.1	chr15	85447378	85454630	(16536559)	C	L1PA14	LINE/L1	(9)	8147	2	1367830
275	27.5	19.7	0.9	chr15	85548173	85548303	(16442886)	+	MIRb	SINE/MIR	8	170	(60)	1367966
14	25.4	3.1	3.0	chr15	88546596	88546659	(13444530)	+	(GCCCCT)n	Simple_repeat	1	66	(0)	1372570
12	21.6	0.0	0.0	chr15	88879001	88879032	(13112157)	+	(GCGGTG)n	Simple_repeat	1	32	(0)	1373171
194	34.9	0.0	0.0	chr15	89346861	89346926	(12644263)	C	MIR3	SINE/MIR	(19)	189	124	1374067
620	25.0	9.2	3.7	chr15	90184398	90184613	(11806576)	C	MIRb	SINE/MIR	(0)	268	40	1375845
12	14.3	3.0	2.9	chr15	90184785	90184817	(11806372)	+	G-rich	Low_complexity	1	34	(0)	1375846
13	11.3	7.5	2.3	chr15	90184818	90184823	(11806366)	+	(TGGCCGG)n	Simple_repeat	2	43	(0)	1375847
1836	18.7	7.7	14.2	chr15	90451225	90451716	(11539473)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	1376391
273	31.9	2.1	1.1	chr15	90646773	90646867	(11344322)	+	L2c	LINE/L2	3273	3368	(19)	1376774
2096	22.2	13.6	3.3	chr15	90735913	90736254	(11254935)	+	L1MC4a	LINE/L1	5284	5656	(2226)	1376987
1883	15.5	2.6	0.7	chr15	90736255	90736558	(11254631)	C	AluJr	SINE/Alu	(2)	310	1	1376993
10804	7.7	6.7	1.3	chr15	90825338	90826830	(11164359)	+	LTR12C	LTR/ERV1	2	1579	(0)	1377181
192	31.9	0.0	0.0	chr15	91784537	91784583	(10206606)	C	MIR3	SINE/MIR	(77)	131	85	1378858
264	34.2	5.5	5.5	chr15	92079238	92079305	(9911884)	C	MIRc	SINE/MIR	(28)	240	174	1379336
1660	20.4	5.6	3.9	chr15	92079306	92079688	(9911501)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	1379337
187	26.1	0.0	4.2	chr15	95982269	95982316	(6008873)	+	MIRb	SINE/MIR	221	266	(2)	1385212
2029	13.8	2.1	5.3	chr15	96477178	96477574	(5513615)	C	L1MA9	LINE/L1	(532)	5780	5397	1385935
230	33.8	0.0	0.0	chr15	96901528	96901595	(5089594)	+	L4_C_Mam	LINE/RTE-X	4870	4937	(201)	1386511
1158	33.2	7.2	6.7	chr15	99095687	99096797	(2894392)	+	HERV16-int	LTR/ERVL	257	1395	(3601)	1389615
3612	10.7	3.0	0.2	chr15	99275849	99276362	(2714827)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1389893
7560	4.5	8.8	1.9	chr15	99596832	99597827	(2393362)	+	MER11C	LTR/ERVK	1	1071	(0)	1390346
2008	12.9	9.4	4.2	chr15	99725153	99725560	(2265629)	+	LTR14B	LTR/ERVK	7	608	(0)	1390506
1948	28.9	12.9	5.0	chr15	99952289	99953086	(2038103)	C	LTR78	LTR/ERV1	(42)	1262	415	1390845
1209	20.9	7.0	6.0	chr15	99953087	99953468	(2037721)	+	MLT1B	LTR/ERVL-MaLR	1	386	(4)	1390846
2202	7.6	0.3	17.9	chr15	100381117	100381534	(1609655)	+	LTR14A	LTR/ERVK	1	344	(0)	1391382
577	28.2	8.9	5.9	chr15	100381535	100381622	(1609567)	+	LTR50	LTR/ERVL	162	268	(263)	1391381
10072	12.8	8.2	0.6	chr15	100424280	100425785	(1565404)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	1391435
216	25.0	10.0	2.7	chr15	100877540	100877613	(1113576)	+	MIR1_Amn	SINE/MIR	90	169	(61)	1392044
482	24.7	14.8	3.8	chr15	101232499	101232814	(758375)	+	L1M5	LINE/L1	5004	5360	(786)	1392510
1907	15.2	4.4	10.1	chr15	101236236	101236539	(754650)	+	THE1B	LTR/ERVL-MaLR	1	300	(64)	1392513
941	25.6	7.2	2.7	chr15	101538902	101539218	(451971)	+	MLT1G1	LTR/ERVL-MaLR	3	307	(262)	1392917
2727	25.1	7.6	3.9	chr15	101547089	101548196	(442993)	+	L1MEg	LINE/L1	531	1781	(4461)	1392925
967	19.8	10.7	9.2	chr15	101567523	101567914	(423275)	C	MER54B	LTR/ERVL	(450)	451	59	1392954
3841	13.7	2.4	0.7	chr16	10059	11142	(90327203)	C	TAR1	Satellite/telo	(43)	1103	1	1394056
6184	14.3	3.4	0.6	chr16	387824	388797	(89949548)	C	LTR5B	LTR/ERVK	(0)	1002	1	1394663
1157	17.5	0.0	6.3	chr16	605073	605235	(89733110)	+	AluJo	SINE/Alu	143	293	(19)	1395004
458	24.3	0.1	1.5	chr16	605236	605371	(89732974)	C	L1ME2	LINE/L1	(601)	5578	5447	1395002
296	24.3	5.5	1.9	chr16	605342	605446	(89732899)	C	L1ME2z	LINE/L1	(0)	6334	6226	1395006
246	25.2	8.9	0.8	chr16	852190	852285	(89486060)	+	L1MB8	LINE/L1	5912	6006	(178)	1395285
2088	21.6	10.6	0.5	chr16	1358210	1358860	(88979485)	C	L1MB3	LINE/L1	(89)	6094	5332	1395783
1748	26.3	4.8	2.6	chr16	1483708	1484259	(88854086)	+	L1MB7	LINE/L1	5600	6169	(15)	1395984
30	0.0	0.0	0.0	chr16	1723620	1723648	(88614697)	+	(AAAAC)n	Simple_repeat	1	29	(0)	1396320
236	31.8	0.0	0.0	chr16	1723697	1723762	(88614583)	+	MIRb	SINE/MIR	125	190	(78)	1396321
258	28.9	14.3	0.0	chr16	3029102	3029215	(87309130)	C	L2c	LINE/L2	(227)	3160	3028	1398355
629	4.1	0.0	0.0	chr16	3152900	3152972	(87185373)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1398603
2117	12.4	0.7	0.7	chr16	3961166	3961471	(86376874)	+	AluJb	SINE/Alu	1	306	(6)	1400165
227	32.5	0.8	10.0	chr16	4223687	4223750	(86114595)	+	MER5A	DNA/hAT-Charlie	128	187	(2)	1400702
249	35.4	2.2	1.7	chr16	4537600	4537777	(85800568)	C	MER5A	DNA/hAT-Charlie	(4)	185	7	1401337
27	0.0	0.0	5.7	chr16	4992232	4992266	(85346079)	+	(TTTCT)n	Simple_repeat	1	35	(0)	1402327
289	26.7	10.0	0.3	chr16	6446574	6446703	(83891642)	+	MIRb	SINE/MIR	61	204	(64)	1405295
287	31.4	10.6	2.5	chr16	7906235	7906355	(82431990)	+	L2b	LINE/L2	3082	3213	(174)	1407936
189	30.8	0.0	3.0	chr16	8905980	8906046	(81432299)	+	MIRb	SINE/MIR	134	198	(70)	1410082
3175	7.3	6.6	0.0	chr16	10417952	10418417	(79919928)	C	MER9a3	LTR/ERVK	(13)	499	1	1413457
6515	4.6	0.5	0.2	chr16	10418418	10419244	(79919101)	C	HERVK9-int	LTR/ERVK	(0)	6021	5193	1413457
665	17.6	0.7	11.5	chr16	11022295	11022459	(79315886)	C	AluJr	SINE/Alu	(137)	175	29	1414769
12	4.3	8.3	0.0	chr16	11256035	11256058	(79082287)	+	(CCCT)n	Simple_repeat	1	26	(0)	1415250
316	30.9	4.8	4.8	chr16	12290626	12290771	(78047574)	+	MLT1J2	LTR/ERVL-MaLR	1	146	(302)	1417627
2405	9.7	0.0	0.0	chr16	12809935	12810244	(77528101)	C	AluYh3	SINE/Alu	(1)	310	1	1418674
1496	17.0	2.0	8.0	chr16	12810245	12810487	(77527858)	+	LTR8	LTR/ERV1	448	691	(0)	1418673
1020	14.8	2.8	0.6	chr16	18219448	18219624	(72118721)	+	MSTB1	LTR/ERVL-MaLR	2	182	(244)	1430764
15	5.6	0.0	0.0	chr16	18219625	18219643	(72118702)	+	(GT)n	Simple_repeat	1	19	(0)	1430765
1169	12.4	0.0	0.0	chr16	18219644	18219796	(72118549)	C	AluSx1	SINE/Alu	(26)	286	134	1430766
2271	9.1	0.3	0.0	chr16	19010168	19010452	(71327893)	C	AluSq2	SINE/Alu	(26)	287	2	1432444
495	15.2	13.8	2.6	chr16	19010453	19010567	(71327778)	C	MLT1J1	LTR/ERVL-MaLR	(66)	382	253	1432445
1587	21.3	4.4	1.1	chr16	19078956	19079307	(71259038)	+	MLT1A0	LTR/ERVL-MaLR	1	364	(1)	1432636
1662	24.0	2.9	2.9	chr16	19163743	19164218	(71174127)	C	Charlie4a	DNA/hAT-Charlie	(0)	508	33	1432863
311	30.9	3.8	7.4	chr16	19164241	19164429	(71173916)	+	L2c	LINE/L2	3110	3291	(96)	1432862
2689	20.2	3.6	6.2	chr16	19225438	19226013	(71112332)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	1433029
2566	15.8	2.6	1.5	chr16	19237368	19237822	(71100523)	+	MER66B	LTR/ERV1	27	486	(0)	1433058
438	30.2	20.7	1.6	chr16	19237867	19238189	(71100156)	C	L2b	LINE/L2	(427)	2992	2592	1433044
1860	13.0	9.7	4.8	chr16	20641357	20641770	(69696575)	+	LTR14B	LTR/ERVK	1	608	(0)	1436246
6078	9.8	0.0	0.2	chr16	20641771	20642589	(69695756)	+	HERVK14-int	LTR/ERVK	1	817	(5279)	1436246
1875	12.9	9.4	4.3	chr16	20647740	20648152	(69690193)	+	LTR14B	LTR/ERVK	1	608	(0)	1436254
2945	12.8	9.3	5.9	chr16	20662969	20663540	(69674805)	+	LTR14B	LTR/ERVK	16	608	(0)	1436268
234	38.2	3.8	0.7	chr16	20663563	20663715	(69674630)	+	MLT1O	LTR/ERVL-MaLR	210	367	(175)	1436269
2923	12.7	5.0	7.2	chr16	20716266	20716874	(69621471)	+	LTR14B	LTR/ERVK	14	608	(0)	1436360
3280	10.8	10.4	0.6	chr16	21182195	21182671	(69155674)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1437362
2232	12.1	0.7	0.3	chr16	21566447	21566753	(68771592)	+	AluSx	SINE/Alu	1	308	(4)	1438163
454	22.7	3.5	7.6	chr16	21566754	21566797	(68771548)	C	MLT1K	LTR/ERVL-MaLR	(67)	528	482	1438162
370	32.9	8.6	4.1	chr16	21566852	21567117	(68771228)	C	MLT1K	LTR/ERVL-MaLR	(217)	378	100	1438162
15	23.1	1.9	3.6	chr16	21599621	21599674	(68738671)	+	(GGC)n	Simple_repeat	1	55	(0)	1438246
388	36.5	4.8	5.8	chr16	23138591	23139055	(67199290)	+	L2b	LINE/L2	2916	3375	(0)	1441499
12	29.9	0.0	5.9	chr16	23596346	23596413	(66741932)	+	(CGG)n	Simple_repeat	1	68	(0)	1442647
2690	13.0	16.3	3.9	chr16	23596928	23597462	(66740883)	C	LTR18B	LTR/ERVL	(0)	614	1	1442650
239	27.4	14.7	3.8	chr16	23678191	23678252	(66660093)	C	MER102b	DNA/hAT-Charlie	(271)	70	9	1442840
591	22.6	0.0	4.6	chr16	23678377	23678529	(66659816)	C	MER5A1	DNA/hAT-Charlie	(2)	164	19	1442842
2511	10.7	0.6	2.5	chr16	23788117	23788331	(66550014)	C	MER41E	LTR/ERV1	(387)	208	1	1443130
221	21.6	0.0	1.9	chr16	23788506	23788557	(66549788)	+	MIR	SINE/MIR	207	257	(5)	1443132
592	24.5	9.2	3.2	chr16	23853187	23853549	(66484796)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	20	1443289
2258	12.9	2.2	3.5	chr16	24357254	24357412	(65980933)	C	THE1B	LTR/ERVL-MaLR	(208)	156	1	1444484
626	29.5	7.5	2.5	chr16	24510387	24510626	(65827719)	C	MLT1K	LTR/ERVL-MaLR	(340)	255	3	1444879
442	22.3	0.8	12.8	chr16	25341557	25341705	(64996640)	C	L1MDa	LINE/L1	(5007)	1626	1496	1446802
1459	20.4	12.0	4.7	chr16	25341707	25342113	(64996232)	C	L1MDa	LINE/L1	(6173)	460	20	1446802
580	13.3	0.0	3.1	chr16	27155305	27155402	(63182943)	+	AluJr4	SINE/Alu	49	143	(169)	1450488
13	28.3	1.3	5.3	chr16	29455717	29455791	(60882554)	+	(CCCGGCC)n	Simple_repeat	1	76	(0)	1455763
1618	18.1	1.0	1.3	chr16	29460142	29460444	(60877901)	C	AluJr	SINE/Alu	(8)	304	3	1455771
12	25.5	3.8	1.8	chr16	29926074	29926126	(60412219)	+	(GCGCCCT)n	Simple_repeat	1	55	(0)	1456879
11	24.4	0.0	0.0	chr16	29974030	29974063	(60364282)	+	G-rich	Low_complexity	1	34	(0)	1457008
11	25.0	3.6	3.5	chr16	30063842	30063897	(60274448)	+	G-rich	Low_complexity	1	58	(0)	1457195
2706	15.8	0.9	4.8	chr16	30153900	30153987	(60184358)	+	L1MB1	LINE/L1	5777	5865	(303)	1457389
2449	15.4	1.2	1.6	chr16	30153988	30154415	(60183930)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1457404
13	28.3	1.3	5.3	chr16	30195059	30195133	(60143212)	+	(CCCGGCC)n	Simple_repeat	1	76	(0)	1457501
1774	18.6	1.0	1.3	chr16	30199480	30199786	(60138559)	C	AluJr	SINE/Alu	(4)	308	3	1457509
14	21.2	4.5	0.0	chr16	30377710	30377753	(59960592)	+	G-rich	Low_complexity	1	46	(0)	1457879
253	35.3	13.5	6.5	chr16	30408369	30408553	(59929792)	C	L2b	LINE/L2	(29)	3346	3147	1457957
509	27.5	16.4	0.0	chr16	30408579	30408771	(59929574)	C	MIR	SINE/MIR	(0)	262	32	1457958
529	31.6	4.9	5.5	chr16	30772335	30772662	(59565683)	C	L2b	LINE/L2	(20)	3355	3030	1458830
1861	20.6	16.4	3.9	chr16	30839354	30839894	(59498451)	+	MLT1E3	LTR/ERVL-MaLR	1	622	(2)	1458992
464	33.0	2.6	1.6	chr16	30941809	30941996	(59396349)	C	MIRc	SINE/MIR	(61)	207	18	1459254
2917	11.9	7.9	10.3	chr16	31659961	31660570	(58677775)	+	LTR14B	LTR/ERVK	15	608	(0)	1460671
38731	15.2	1.2	0.7	chr16	31660571	31667607	(58670738)	+	HERVK14-int	LTR/ERVK	1	7359	(75)	1460671
3207	12.1	6.2	10.1	chr16	31667777	31668393	(58669952)	+	LTR14B	LTR/ERVK	17	608	(0)	1460673
16473	15.6	3.6	1.0	chr16	31668397	31671576	(58666769)	C	L1P4e	LINE/L1	(910)	5763	2498	1460674
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
27	2.3	8.9	0.0	chr16	34454071	34454115	(55884230)	+	(GAATGGAATC)n	Simple_repeat	1	49	(0)	1463879
28	2.6	0.0	6.7	chr16	34725483	34725527	(55612818)	+	(ATTCCATTCG)n	Simple_repeat	1	45	(0)	1464069
29	2.5	0.0	6.5	chr16	34726984	34727029	(55611316)	+	(GATTCCATTC)n	Simple_repeat	1	46	(0)	1464070
27	2.3	8.9	0.0	chr16	34894487	34894531	(55443814)	+	(ATTCCATTCG)n	Simple_repeat	1	49	(0)	1464229
237	28.0	14.5	2.5	chr16	46686973	46687093	(43651252)	+	MIRb	SINE/MIR	131	268	(0)	1465818
14	8.2	3.9	0.0	chr16	46831050	46831075	(43507270)	+	(CCGC)n	Simple_repeat	1	27	(0)	1466114
1181	22.6	11.4	2.1	chr16	46850605	46850929	(43487416)	+	ERV3-16A3_LTR	LTR/ERVL	48	406	(16)	1466162
2833	21.1	9.4	2.7	chr16	47747599	47748512	(42589833)	C	L1MEc	LINE/L1	(5365)	1035	55	1467587
325	31.0	7.0	7.3	chr16	48092569	48092934	(42245411)	C	L2a	LINE/L2	(2)	3424	3010	1468115
456	24.7	6.9	5.9	chr16	48448584	48448785	(41889560)	C	Charlie18a	DNA/hAT-Charlie	(11)	331	128	1468818
3608	16.4	2.8	7.8	chr16	48589763	48590491	(41747854)	+	LTR8	LTR/ERV1	1	691	(0)	1469062
223	26.0	0.0	6.1	chr16	49272701	49272782	(41065563)	C	L2c	LINE/L2	(60)	3327	3251	1470261
405	26.2	4.7	2.4	chr16	49272950	49273074	(41065271)	C	L2a	LINE/L2	(0)	3426	3299	1470262
476	24.8	4.2	0.0	chr16	49552215	49552346	(40785999)	+	MIR3	SINE/MIR	37	175	(55)	1470716
342	28.9	11.8	0.7	chr16	51640546	51640695	(38697650)	+	LTR33	LTR/ERVL	243	411	(104)	1474717
440	25.2	0.0	10.3	chr16	51640807	51640918	(38697427)	C	MER5A1	DNA/hAT-Charlie	(7)	159	55	1474718
418	33.2	12.7	3.9	chr16	52956267	52956668	(37381677)	C	L2a	LINE/L2	(386)	3001	2560	1476879
730	12.1	0.8	0.0	chr16	52956672	52956787	(37381558)	+	L1MB3	LINE/L1	5446	5562	(609)	1476880
12241	7.8	0.9	0.1	chr16	53073870	53075436	(37262909)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1477168
1964	16.6	0.7	0.0	chr16	53475214	53475514	(36862831)	C	AluSz6	SINE/Alu	(8)	304	2	1477914
10714	16.4	7.2	8.3	chr16	53475515	53475835	(36862510)	C	L1MB5	LINE/L1	(2860)	4146	3884	1477910
413	29.2	2.3	5.1	chr16	54349648	54349784	(35988561)	+	MIRc	SINE/MIR	14	146	(122)	1479372
2374	15.4	7.0	0.5	chr16	54349816	54350213	(35988132)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1479373
406	25.3	8.7	0.0	chr16	54397347	54397465	(35940880)	C	MIRc	SINE/MIR	(108)	160	27	1479464
2144	11.0	1.0	3.2	chr16	54523573	54523881	(35814464)	+	AluSx3	SINE/Alu	2	303	(8)	1479684
29	31.6	1.6	2.3	chr16	56558420	56558432	(33779913)	+	GA-rich	Low_complexity	40	126	(0)	1483282
307	30.8	5.8	6.0	chr16	57317155	57317467	(33020878)	C	L2c	LINE/L2	(46)	3329	3025	1484816
902	24.1	2.1	6.9	chr16	57317493	57317623	(33020722)	+	MIR	SINE/MIR	2	129	(133)	1484817
1143	29.2	6.8	1.4	chr16	57341848	57342267	(32996078)	+	MLT1J2	LTR/ERVL-MaLR	5	448	(0)	1484867
3481	11.3	2.6	0.0	chr16	57489073	57489587	(32848758)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	1485158
195	29.5	12.8	0.0	chr16	57530531	57530625	(32807720)	+	L2c	LINE/L2	1419	1527	(1892)	1485257
183	25.4	2.9	4.3	chr16	66369027	66369096	(23969249)	+	MIR1_Amn	SINE/MIR	85	153	(77)	1499594
185	29.7	5.9	8.3	chr16	66369064	66369184	(23969161)	C	L3	LINE/CR1	(2301)	1798	1681	1499595
342	32.8	7.6	5.5	chr16	67834041	67834221	(22504124)	+	MIRb	SINE/MIR	84	268	(0)	1502444
1918	12.7	0.0	0.4	chr16	68175567	68175833	(22162512)	C	AluSz6	SINE/Alu	(19)	293	28	1503087
479	22.8	18.4	7.8	chr16	68175865	68175983	(22162362)	C	L1ME3E	LINE/L1	(71)	6171	6019	1503088
2239	10.0	0.3	0.0	chr16	68175984	68176274	(22162071)	C	AluSg4	SINE/Alu	(17)	293	2	1503089
2183	13.2	0.7	0.0	chr16	69812162	69812464	(20525881)	C	AluSx1	SINE/Alu	(7)	305	1	1506641
1045	16.0	2.3	1.2	chr16	69812478	69812646	(20525699)	C	AluJb	SINE/Alu	(13)	299	129	1506642
1779	7.6	0.0	0.0	chr16	70145225	70145435	(20192910)	C	AluSg	SINE/Alu	(99)	211	1	1507333
1550	24.1	8.0	1.7	chr16	72775148	72775709	(17562636)	C	L1M8	LINE/L1	(1391)	964	347	1511978
20	6.5	0.0	2.9	chr16	73096162	73096195	(17242150)	+	(CTGC)n	Simple_repeat	1	34	(0)	1512405
2969	14.5	0.2	0.0	chr16	73162084	73162511	(17175834)	+	MER1A	DNA/hAT-Charlie	1	429	(100)	1512552
1717	8.1	0.9	0.0	chr16	74335685	74335895	(16002450)	+	AluSx1	SINE/Alu	1	213	(99)	1514453
1926	18.0	8.5	3.4	chr16	74835496	74835736	(15502609)	C	MLT1D	LTR/ERVL-MaLR	(46)	459	195	1515537
15719	14.4	3.1	4.0	chr16	75435212	75436389	(14901956)	+	Tigger17	DNA/TcMar-Tigger	1200	2379	(294)	1516787
808	10.9	0.0	0.0	chr16	77375205	77375305	(12963040)	C	AluSx	SINE/Alu	(195)	117	17	1519723
329	30.6	6.0	5.3	chr16	78669099	78669364	(11668981)	C	LTR67B	LTR/ERVL	(285)	335	68	1522153
922	20.1	1.5	2.9	chr16	78669381	78669585	(11668760)	+	MER20	DNA/hAT-Charlie	14	215	(4)	1522154
3611	13.6	0.9	0.0	chr16	79386085	79386608	(10951737)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	1523447
201	31.4	2.8	0.0	chr16	80072040	80072109	(10266236)	C	MIRb	SINE/MIR	(190)	78	7	1524687
27	17.7	0.0	1.7	chr16	81779195	81779253	(8559092)	+	(GGCGG)n	Simple_repeat	1	59	(0)	1528023
729	24.3	12.1	0.0	chr16	83701895	83702083	(6636262)	+	MIR	SINE/MIR	48	262	(0)	1531446
1090	25.1	13.5	0.6	chr16	84538423	84538938	(5799407)	+	L1ME3A	LINE/L1	5585	6169	(4)	1533015
654	24.8	4.8	1.9	chr16	84854086	84854308	(5484037)	+	MIR	SINE/MIR	15	241	(21)	1533705
284	29.5	4.8	8.0	chr16	85052666	85052816	(5285529)	C	L3b	LINE/CR1	(497)	4735	4590	1534098
2291	7.5	1.6	0.3	chr16	85052881	85053188	(5285157)	C	AluSx1	SINE/Alu	(0)	312	1	1534099
723	31.4	6.4	3.8	chr16	85227795	85228329	(5110016)	C	L2b	LINE/L2	(0)	3375	2830	1534438
358	29.9	2.5	4.2	chr16	85241164	85241325	(5097020)	+	MIRb	SINE/MIR	66	233	(35)	1534469
530	30.1	0.6	0.0	chr16	85241391	85241546	(5096799)	+	MER63B	DNA/hAT-Blackjack	278	434	(2)	1534470
262	29.5	6.4	1.1	chr16	85269043	85269131	(5069214)	C	MIRb	SINE/MIR	(86)	182	89	1534529
2390	8.9	0.0	0.3	chr16	85282022	85282324	(5056021)	C	AluSc	SINE/Alu	(6)	303	2	1534549
230	21.9	2.4	1.2	chr16	85400250	85400915	(4937430)	+	(TG)n	Simple_repeat	1	674	(0)	1534780
2195	11.9	0.0	0.3	chr16	86140584	86140867	(4197478)	C	AluSx	SINE/Alu	(28)	284	1	1536120
2157	18.4	2.8	3.5	chr16	86140868	86141063	(4197282)	C	MSTB	LTR/ERVL-MaLR	(238)	188	1	1536118
344	32.9	5.7	0.7	chr16	86141072	86141221	(4197124)	C	MIRb	SINE/MIR	(28)	240	83	1536121
535	29.5	17.5	4.5	chr16	86416821	86417310	(3921035)	C	LTR67B	LTR/ERVL	(30)	590	24	1536621
742	26.6	2.4	1.0	chr16	87657747	87657955	(2680390)	C	MLT1J	LTR/ERVL-MaLR	(298)	214	3	1538862
278	30.2	4.2	0.0	chr16	87664742	87664863	(2673482)	C	MIRb	SINE/MIR	(89)	179	52	1538878
20	0.0	0.0	0.0	chr16	88786114	88786135	(1552210)	+	(A)n	Simple_repeat	1	22	(0)	1540424
17	9.7	2.9	2.8	chr16	89187990	89188024	(1150321)	+	G-rich	Low_complexity	1	36	(0)	1540885
3293	14.1	3.0	0.2	chr16	90088763	90089339	(249006)	+	L1MA2	LINE/L1	5711	6304	(0)	1542349
950	19.3	0.6	0.0	chr17	166479	166644	(83090797)	+	THE1B	LTR/ERVL-MaLR	1	167	(197)	1544722
239	23.5	1.4	4.2	chr17	1550856	1550926	(81706515)	C	L2b	LINE/L2	(649)	2770	2702	1547347
1722	16.2	0.3	4.3	chr17	1835155	1835456	(81421985)	C	AluJr	SINE/Alu	(22)	290	1	1547932
2181	10.4	2.3	0.6	chr17	1835457	1835793	(81421648)	C	HSMAR2	DNA/TcMar-Mariner	(958)	344	2	1547933
2395	10.2	0.0	0.0	chr17	2014550	2014852	(81242589)	+	AluSx	SINE/Alu	1	303	(9)	1548304
402	34.2	8.1	3.7	chr17	2014853	2014946	(81242495)	C	L2c	LINE/L2	(372)	3015	2920	1548303
3187	12.7	4.5	1.8	chr17	2484986	2485499	(80771942)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1549207
353	30.1	5.5	0.0	chr17	2786212	2786314	(80471127)	C	MIR3	SINE/MIR	(68)	140	32	1549946
422	26.7	6.7	4.3	chr17	3479407	3479594	(79777847)	C	MLT1J	LTR/ERVL-MaLR	(13)	499	307	1551094
476	25.7	13.4	0.4	chr17	3935302	3935528	(79321913)	+	MLT1K	LTR/ERVL-MaLR	1	261	(334)	1552034
2431	7.2	0.0	0.0	chr17	3935536	3935826	(79321615)	C	AluSx1	SINE/Alu	(10)	302	12	1552035
954	20.0	3.7	7.1	chr17	3952891	3953055	(79304386)	+	MER20	DNA/hAT-Charlie	55	218	(1)	1552068
18	16.5	4.4	5.6	chr17	3953203	3953271	(79304170)	+	G-rich	Low_complexity	1	68	(0)	1552070
1765	19.7	2.4	21.6	chr17	3993897	3994465	(79262976)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	1552160
189	21.1	7.3	0.0	chr17	5541525	5541562	(77715879)	C	MIR	SINE/MIR	(77)	185	145	1555350
3367	9.1	11.9	1.3	chr17	5809318	5809849	(77447592)	+	LTR4	LTR/ERV1	1	596	(0)	1555850
2406	8.2	1.0	0.0	chr17	8247306	8247608	(75009833)	C	AluSz	SINE/Alu	(6)	306	1	1560402
2925	13.9	5.0	2.1	chr17	8338305	8338827	(74918614)	+	LTR45C	LTR/ERV1	1	539	(0)	1560596
1683	16.6	3.3	2.6	chr17	8338828	8339032	(74918409)	C	MSTB1	LTR/ERVL-MaLR	(228)	204	3	1560595
1843	18.6	5.2	4.2	chr17	8927707	8928115	(74329326)	+	MSTB1	LTR/ERVL-MaLR	17	419	(13)	1561731
211	33.7	13.8	0.6	chr17	9211096	9211277	(74046164)	+	L2	LINE/L2	2871	3080	(339)	1562257
2536	14.1	14.7	3.1	chr17	9588079	9588619	(73668822)	+	LTR18B	LTR/ERVL	1	614	(0)	1562998
829	27.1	8.4	0.0	chr17	9908981	9909242	(73348199)	+	L2a	LINE/L2	2488	2773	(646)	1563664
1654	22.1	11.1	4.3	chr17	10092594	10093062	(73164379)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	1564018
2124	7.9	7.4	0.0	chr17	10093297	10093573	(73163868)	+	AluSc	SINE/Alu	2	300	(9)	1564019
696	29.8	3.8	0.4	chr17	10716602	10716827	(72540614)	C	L1MEg	LINE/L1	(1136)	5183	4950	1565134
3301	11.4	5.2	9.5	chr17	11659302	11659922	(71597519)	+	LTR14B	LTR/ERVK	16	608	(0)	1566833
2981	26.0	5.2	5.6	chr17	11659928	11660315	(71597126)	C	L1ME2	LINE/L1	(2818)	3328	2926	1566832
184	26.9	3.7	0.0	chr17	12427594	12427645	(70829796)	C	L2b	LINE/L2	(13)	3362	3309	1568052
13	8.1	3.6	3.5	chr17	12427788	12427815	(70829626)	+	(GTT)n	Simple_repeat	1	29	(0)	1568053
12	9.7	0.0	0.0	chr17	12789487	12789508	(70467933)	+	(GCCA)n	Simple_repeat	1	22	(0)	1568663
1404	30.8	7.9	3.4	chr17	13026750	13027548	(70229893)	C	L2c	LINE/L2	(528)	2891	2054	1569061
2736	5.1	0.0	0.0	chr17	13470439	13470749	(69786692)	+	AluYf1	SINE/Alu	1	311	(0)	1569833
2127	12.6	0.3	0.0	chr17	13470998	13471282	(69786159)	C	AluSz	SINE/Alu	(21)	291	6	1569834
9487	16.4	3.1	0.2	chr17	13480143	13481726	(69775715)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	1569848
1220	23.4	7.3	3.7	chr17	13573698	13574052	(69683389)	+	MLT1A	LTR/ERVL-MaLR	5	373	(1)	1569991
2572	12.6	2.8	5.3	chr17	14036518	14036909	(69220532)	C	MSTA	LTR/ERVL-MaLR	(37)	391	1	1570791
941	28.7	12.0	0.5	chr17	14218395	14218776	(69038665)	C	L1MC5a	LINE/L1	(1081)	1696	1265	1571065
2554	15.3	4.9	1.2	chr17	14569354	14569763	(68687678)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1571678
9910	16.3	0.6	4.2	chr17	14569764	14571129	(68686312)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	343	1571678
1641	21.9	15.2	4.8	chr17	15436803	15437491	(67819950)	+	LTR50	LTR/ERVL	15	788	(7)	1573043
408	25.4	8.2	9.2	chr17	15746624	15746786	(67510655)	C	MLT1F-int	LTR/ERVL-MaLR	(91)	1398	1251	1573591
2870	11.6	6.8	11.5	chr17	15746799	15747423	(67510018)	C	LTR14B	LTR/ERVK	(0)	608	16	1573592
11618	9.5	1.3	0.0	chr17	16114362	16115919	(67141522)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	1574234
306	16.7	1.0	12.7	chr17	17710824	17710933	(65546508)	C	MIR3	SINE/MIR	(86)	122	26	1577209
2250	11.9	0.0	0.7	chr17	17900250	17900551	(65356890)	+	AluSz	SINE/Alu	13	312	(0)	1577537
2844	19.2	10.7	1.8	chr17	17958670	17959343	(65298098)	+	MER21B	LTR/ERVL	1	741	(127)	1577660
41	9.7	1.5	0.0	chr17	18039406	18039471	(65217970)	+	(GT)n	Simple_repeat	1	67	(0)	1577827
1832	16.0	1.0	2.7	chr17	18085984	18086277	(65171164)	+	AluJb	SINE/Alu	2	290	(22)	1577921
535	26.3	7.2	8.9	chr17	18086278	18086370	(65171071)	C	L1MC4	LINE/L1	(600)	7442	7350	1577911
1798	14.7	4.9	0.7	chr17	18086374	18086665	(65170776)	+	AluJb	SINE/Alu	1	305	(7)	1577922
17	14.5	2.0	5.8	chr17	18261395	18261445	(64995996)	+	(CCTGGCA)n	Simple_repeat	1	52	(0)	1578240
22	13.0	0.0	0.0	chr17	18677906	18677939	(64579502)	+	(A)n	Simple_repeat	1	34	(0)	1578924
2311	16.4	3.8	4.0	chr17	18745865	18746290	(64511151)	C	MSTB1	LTR/ERVL-MaLR	(7)	425	1	1579047
430	24.7	12.3	1.9	chr17	19031591	19031798	(64225643)	C	MIR	SINE/MIR	(0)	230	5	1579645
316	28.8	14.0	0.7	chr17	19263133	19263286	(63994155)	C	MLT1I	LTR/ERVL-MaLR	(212)	199	22	1580303
10236	13.3	1.6	1.2	chr17	19442425	19444001	(63813440)	+	MSTA-int	LTR/ERVL-MaLR	47	1631	(0)	1580610
2255	12.2	11.9	2.6	chr17	19444002	19444315	(63813126)	+	MSTA	LTR/ERVL-MaLR	1	362	(66)	1580610
1499	19.8	6.0	3.5	chr17	19492232	19492571	(63764870)	+	MSTD	LTR/ERVL-MaLR	1	349	(47)	1580709
9879	10.7	6.0	3.1	chr17	19653342	19654872	(63602569)	C	LTR12C	LTR/ERV1	(0)	1579	2	1581033
2887	12.7	11.8	2.1	chr17	20059140	20059500	(63197941)	C	MER1A	DNA/hAT-Charlie	(118)	411	1	1581864
5796	15.1	4.5	0.9	chr17	20201799	20202824	(63054617)	+	Tigger2b_Pri	DNA/TcMar-Tigger	3	1067	(1)	1582137
475	29.8	7.8	0.0	chr17	20254322	20254499	(63002942)	+	MIR	SINE/MIR	49	241	(21)	1582210
2358	7.7	2.0	8.4	chr17	20563122	20563488	(62693953)	C	LTR14A	LTR/ERVK	(1)	343	1	1582686
469	23.7	12.3	0.0	chr17	21294799	21294933	(61962508)	C	MIR	SINE/MIR	(87)	175	22	1584024
291	35.0	7.2	1.0	chr17	21295063	21295258	(61962183)	C	L2b	LINE/L2	(248)	3127	2919	1584025
1920	16.8	0.0	0.0	chr17	21306796	21307081	(61950360)	C	AluJo	SINE/Alu	(22)	290	5	1584043
2041	21.2	9.2	3.6	chr17	21307082	21307356	(61950085)	C	MER21C	LTR/ERVL	(558)	380	10	1584041
212	19.0	0.3	7.4	chr17	21360636	21360696	(61896745)	+	MIR1_Amn	SINE/MIR	122	180	(88)	1584145
2387	30.5	5.1	4.4	chr17	21678460	21686980	(61570461)	C	SST1	Satellite/centr	(27)	8578	1	1584644
1496	26.5	9.7	0.4	chr17	22362669	22363126	(60894315)	+	LTR16E1	LTR/ERVL	16	520	(18)	1585387
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26936464	26936920	(56320521)	+	(GAATG)n	Satellite	3	459	(0)	1585986
288	22.2	4.5	0.0	chr17	26936921	26936983	(56320458)	+	AluYj4	SINE/Alu	224	289	(22)	1585987
1545	18.6	0.5	0.9	chr17	26938538	26939277	(56318164)	+	(GAATG)n	Satellite	3	736	(0)	1585994
437	12.7	3.1	0.0	chr17	26939289	26939351	(56318090)	+	AluSz6	SINE/Alu	225	289	(23)	1585995
1545	18.6	0.5	0.9	chr17	26939351	26939821	(56317620)	+	(GAATG)n	Satellite	4	474	(0)	1585996
377	19.1	1.6	0.0	chr17	26939822	26939884	(56317557)	+	AluYj4	SINE/Alu	224	287	(24)	1585997
1545	18.6	0.5	0.9	chr17	26939888	26940398	(56317043)	+	(GAATG)n	Satellite	3	514	(0)	1585998
301	22.2	3.1	0.0	chr17	26940399	26940461	(56316980)	+	AluYj4	SINE/Alu	224	288	(23)	1585999
1545	18.6	0.5	0.9	chr17	26940461	26941027	(56316414)	+	(GAATG)n	Satellite	4	569	(0)	1586000
289	25.4	15.0	0.9	chr17	27380834	27380956	(55876485)	C	L2b	LINE/L2	(2)	3424	3247	1586665
231	30.1	3.1	0.0	chr17	27497410	27497502	(55759939)	+	MER113	DNA/hAT-Charlie	73	168	(353)	1586906
246	15.8	7.8	1.6	chr17	27497642	27497761	(55759680)	+	MER113A	DNA/hAT-Charlie	186	266	(36)	1586907
3459	10.0	7.4	0.4	chr17	27554329	27554820	(55702621)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1587030
4243	17.1	2.7	4.1	chr17	27694961	27695819	(55561622)	C	MER11A	LTR/ERVK	(0)	1071	225	1587250
2796	15.0	5.4	0.0	chr17	27702160	27702611	(55554830)	+	MER9a3	LTR/ERVK	33	510	(2)	1587251
24234	8.9	2.2	0.6	chr17	27712449	27717775	(55539666)	+	HERV9-int	LTR/ERV1	29	5634	(2802)	1587276
846	20.6	4.5	1.1	chr17	28221311	28221460	(55035981)	+	L2a	LINE/L2	3268	3420	(6)	1588298
6860	10.5	13.8	1.6	chr17	28261720	28262802	(54994639)	+	MER11B	LTR/ERVK	1	1236	(0)	1588356
1818	18.0	0.6	4.7	chr17	28266198	28266558	(54990883)	+	HERV-Fc1_LTR1	LTR/ERV1	1	346	(0)	1588360
1814	17.5	0.9	5.0	chr17	28267554	28267914	(54989527)	+	HERV-Fc1_LTR1	LTR/ERV1	1	346	(0)	1588362
367	24.2	13.9	0.0	chr17	28525512	28525610	(54731831)	+	MIRb	SINE/MIR	86	200	(68)	1588852
2552	5.9	0.0	0.0	chr17	30139743	30140032	(53117409)	+	AluY	SINE/Alu	1	290	(21)	1592018
1033	18.2	12.7	6.2	chr17	30140033	30140415	(53117026)	+	Charlie1b	DNA/hAT-Charlie	108	523	(0)	1592017
334	16.7	2.4	1.1	chr17	30594330	30594435	(52663006)	C	AluY	SINE/Alu	(0)	301	237	1592811
5636	13.9	1.6	1.5	chr17	30594444	30595338	(52662103)	C	LTR5B	LTR/ERVK	(0)	1002	101	1592812
2048	14.1	4.7	3.6	chr17	30803512	30803871	(52453570)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1593307
2104	9.7	4.8	0.0	chr17	30986216	30986493	(52270948)	C	AluSg4	SINE/Alu	(17)	293	2	1593755
553	33.6	5.6	15.4	chr17	30986494	30986599	(52270842)	+	L2b	LINE/L2	3284	3375	(0)	1593754
683	26.6	8.2	0.0	chr17	30986642	30986844	(52270597)	+	MIRc	SINE/MIR	46	266	(2)	1593756
3277	10.6	9.1	1.4	chr17	31025589	31026075	(52231366)	C	MER1A	DNA/hAT-Charlie	(0)	529	2	1593847
25035	6.4	3.0	0.1	chr17	31634266	31638526	(51618915)	+	HERVK9-int	LTR/ERVK	1637	6021	(0)	1594984
3926	5.9	3.7	0.0	chr17	31638527	31639019	(51618422)	+	MER9a3	LTR/ERVK	1	512	(0)	1594984
314	29.5	4.7	3.2	chr17	33946502	33946627	(49310814)	C	L2c	LINE/L2	(0)	3375	3248	1599612
3986	8.7	0.8	0.0	chr17	34303786	34304280	(48953161)	C	MER9B	LTR/ERVK	(0)	499	1	1600174
16	0.0	0.0	0.0	chr17	34854017	34854037	(48403404)	+	(ATAA)n	Simple_repeat	1	21	(0)	1601207
201	30.0	3.8	5.4	chr17	35120054	35120243	(48137198)	C	L2b	LINE/L2	(27)	3399	3217	1601737
16895	8.9	1.9	0.7	chr17	35298075	35298368	(47959073)	+	LTR19-int	LTR/ERV1	1	329	(5257)	1602055
50	3.7	1.8	0.0	chr17	35298369	35298423	(47959018)	+	(CT)n	Simple_repeat	1	56	(0)	1602056
16895	8.8	5.5	0.7	chr17	35298424	35300398	(47957043)	+	LTR19-int	LTR/ERV1	330	2368	(3218)	1602055
610	27.0	3.1	1.9	chr17	38847927	38848085	(44409356)	+	AluJr4	SINE/Alu	140	300	(12)	1608725
1857	15.0	2.4	0.0	chr17	38848245	38848530	(44408911)	C	AluSx	SINE/Alu	(17)	295	3	1608726
4351	12.1	1.4	4.1	chr17	39014173	39014879	(44242562)	+	LTR8	LTR/ERV1	1	688	(3)	1609127
641	2.7	0.0	0.0	chr17	39154490	39154562	(44102879)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609433
183	30.6	5.8	3.9	chr17	39687546	39687647	(43569794)	+	L2c	LINE/L2	3284	3387	(0)	1610580
1526	21.5	9.6	3.3	chr17	39820634	39821323	(43436118)	+	MER21B	LTR/ERVL	99	878	(60)	1610833
2416	9.4	0.0	0.0	chr17	39963572	39963870	(43293571)	+	AluSq2	SINE/Alu	1	299	(14)	1611088
542	29.9	11.5	2.8	chr17	39963950	39964266	(43293175)	C	L2c	LINE/L2	(0)	3387	3040	1611089
12	23.3	4.4	0.0	chr17	39980700	39980744	(43276697)	+	(TCCTCCA)n	Simple_repeat	1	47	(0)	1611118
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
187	25.0	0.0	0.0	chr17	41801851	41801898	(41455543)	C	MIR3	SINE/MIR	(60)	148	101	1614330
1097	13.2	0.0	0.0	chr17	42019127	42019277	(41238164)	+	AluJo	SINE/Alu	137	287	(25)	1614784
18	0.0	4.0	0.0	chr17	42019281	42019305	(41238136)	+	(CAA)n	Simple_repeat	1	26	(0)	1614785
206	29.0	19.0	0.0	chr17	42019316	42019439	(41238002)	+	L2b	LINE/L2	2711	2863	(556)	1614783
305	32.6	6.4	2.2	chr17	42019699	42019833	(41237608)	+	L2b	LINE/L2	3233	3373	(2)	1614783
3868	11.2	0.0	1.5	chr17	42290860	42291392	(40966049)	C	MER1A	DNA/hAT-Charlie	(4)	525	1	1615311
2585	17.4	2.3	0.0	chr17	42870396	42870900	(40386541)	C	L1MC4a	LINE/L1	(741)	7141	6625	1616513
324	25.3	1.2	0.0	chr17	42870902	42870980	(40386461)	+	MIR	SINE/MIR	183	262	(0)	1616514
13	14.8	3.9	7.4	chr17	42871709	42871760	(40385681)	+	(TGTC)n	Simple_repeat	1	54	(0)	1616516
441	29.2	13.8	8.0	chr17	42871763	42871979	(40385462)	+	MIR	SINE/MIR	8	230	(32)	1616517
1764	0.0	0.0	0.0	chr17	43251833	43252019	(40005422)	C	U2	snRNA	(1)	187	1	1617408
980	21.3	8.3	5.0	chr17	43255091	43255451	(40001990)	C	ERV3-16A3_I-int	LTR/ERVL	(197)	5029	4656	1617416
318	20.1	9.1	1.5	chr17	43272629	43272830	(39984611)	+	HERVIP10FH-int	LTR/ERV1	820	1038	(4064)	1617463
1153	21.3	8.3	4.5	chr17	43288119	43288477	(39968964)	C	ERV3-16A3_I-int	LTR/ERVL	(197)	5029	4656	1617504
7985	10.8	0.6	4.6	chr17	43319366	43320150	(39937291)	C	THE1B-int	LTR/ERVL-MaLR	(298)	1282	501	1617594
562	22.5	4.2	3.6	chr17	43391957	43392122	(39865319)	C	MER45C	DNA/hAT-Tip100	(85)	868	702	1617700
459	25.9	1.8	0.0	chr17	43392177	43392288	(39865153)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	1617701
15	29.9	0.0	0.0	chr17	44138450	44138488	(39118953)	+	(CA)n	Simple_repeat	1	39	(0)	1619307
976	18.9	0.0	0.0	chr17	44138608	44138782	(39118659)	C	MER3	DNA/hAT-Charlie	(34)	175	1	1619308
12	13.9	9.8	3.6	chr17	44599684	44599734	(38657707)	+	GA-rich	Low_complexity	1	56	(0)	1620294
203	38.8	2.0	3.0	chr17	45035689	45035789	(38221652)	C	MIR1_Amn	SINE/MIR	(79)	151	52	1621216
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
322	17.9	0.0	0.0	chr17	45176236	45176291	(38081150)	C	MIRc	SINE/MIR	(130)	138	83	1621493
433	16.8	13.6	0.0	chr17	45948996	45949090	(37308351)	C	L1MB7	LINE/L1	(0)	6184	6075	1623100
3498	10.9	4.5	2.7	chr17	46705721	46706138	(36551303)	+	MER1A	DNA/hAT-Charlie	1	435	(94)	1624592
12	31.3	0.0	0.0	chr17	47324096	47324142	(35933299)	+	G-rich	Low_complexity	1	47	(0)	1625797
42	20.9	2.0	6.7	chr17	47719171	47719329	(35538112)	+	GA-rich	Low_complexity	1	151	(0)	1626600
1653	9.5	4.8	10.2	chr17	48434869	48435153	(34822288)	+	AluJr	SINE/Alu	29	297	(15)	1627834
27	0.0	0.0	0.0	chr17	48636528	48636553	(34620888)	+	(T)n	Simple_repeat	1	26	(0)	1628167
18248	8.0	4.3	4.4	chr17	49127004	49129523	(34127918)	C	LTR19-int	LTR/ERV1	(3059)	2527	1	1629264
3047	6.9	10.1	0.7	chr17	49129524	49129963	(34127478)	C	LTR19A	LTR/ERV1	(0)	486	1	1629264
26	0.0	0.0	0.0	chr17	49230741	49230765	(34026676)	+	(GGAGCC)n	Simple_repeat	1	25	(0)	1629472
19	4.0	3.9	0.0	chr17	49515375	49515400	(33742041)	+	(AC)n	Simple_repeat	1	27	(0)	1630080
15	0.0	0.0	0.0	chr17	49515400	49515416	(33742025)	+	(AG)n	Simple_repeat	1	17	(0)	1630081
12	21.5	4.4	2.1	chr17	49515437	49515481	(33741960)	+	(GCAG)n	Simple_repeat	1	47	(0)	1630082
14	27.1	0.0	0.0	chr17	49515586	49515629	(33741812)	+	(CCTGAG)n	Simple_repeat	1	44	(0)	1630083
436	31.5	0.6	3.5	chr17	49951578	49951748	(33305693)	C	MIRc	SINE/MIR	(12)	256	91	1630875
215	32.4	0.0	2.9	chr17	49975048	49975117	(33282324)	+	MIR3	SINE/MIR	31	98	(170)	1630916
2128	14.0	8.1	0.8	chr17	50052575	50052964	(33204477)	C	LTR52	LTR/ERVL	(0)	421	1	1631078
1701	30.6	17.2	2.2	chr17	50282966	50284664	(32972777)	+	L2	LINE/L2	846	2853	(566)	1631458
12	27.1	0.0	2.2	chr17	50560616	50560661	(32696780)	+	(GGCGCGC)n	Simple_repeat	1	46	(0)	1632032
13	3.0	10.0	6.8	chr17	50560724	50560763	(32696678)	+	(GCTC)n	Simple_repeat	1	44	(0)	1632033
25	26.4	0.0	1.4	chr17	50560762	50560835	(32696606)	+	(CGG)n	Simple_repeat	1	74	(0)	1632034
2294	20.2	17.2	0.7	chr17	51391823	51392382	(31865059)	C	MLT2F	LTR/ERVL	(9)	654	1	1633690
971	21.6	15.0	4.4	chr17	51461578	51462198	(31795243)	+	LTR50	LTR/ERVL	1	795	(0)	1633829
1692	19.6	3.6	3.6	chr17	51539627	51540013	(31717428)	C	MER96B	DNA/hAT-Tip100	(1)	416	30	1633972
436	30.5	8.1	2.2	chr17	51540021	51540288	(31717153)	+	LTR88a	LTR/Gypsy?	188	472	(344)	1633973
311	24.2	7.1	6.8	chr17	51746310	51746475	(31510966)	C	MIRb	SINE/MIR	(47)	161	2	1634329
266	30.8	14.8	2.3	chr17	51764246	51764524	(31492917)	+	L2c	LINE/L2	3082	3374	(1)	1634365
3049	15.4	1.9	3.3	chr17	53197375	53197973	(30059468)	C	L1PA16	LINE/L1	(3)	6163	5574	1636418
1056	25.0	15.3	3.2	chr17	55247753	55248153	(28009288)	+	MLT1J	LTR/ERVL-MaLR	1	458	(54)	1639312
2116	10.3	0.0	5.0	chr17	55526159	55526458	(27730983)	C	AluSx	SINE/Alu	(27)	285	1	1639796
343	27.1	0.2	0.4	chr17	55526466	55526556	(27730885)	C	MIR	SINE/MIR	(70)	160	73	1639797
288	26.6	10.0	3.6	chr17	57586986	57587153	(25670288)	C	MER5A	DNA/hAT-Charlie	(9)	180	1	1643502
1383	28.6	11.6	0.0	chr17	57634690	57635109	(25622332)	C	MLT1J	LTR/ERVL-MaLR	(37)	475	1	1643575
330	36.8	12.7	2.1	chr17	57660486	57660865	(25596576)	C	L2c	LINE/L2	(44)	3343	2918	1643615
1247	28.9	3.6	4.5	chr17	58052778	58053309	(25204132)	+	L2	LINE/L2	1172	1698	(1721)	1644361
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
2490	10.3	0.3	0.0	chr17	61241995	61242294	(22015147)	+	AluSp	SINE/Alu	1	301	(12)	1650732
488	29.6	7.5	10.7	chr17	62660289	62660940	(20596501)	+	L1MEb	LINE/L1	340	802	(5398)	1653467
422	35.3	7.8	0.0	chr17	62661068	62661302	(20596139)	C	L2a	LINE/L2	(351)	3068	2814	1653459
292	27.2	5.8	3.6	chr17	62708587	62708670	(20548771)	C	L2a	LINE/L2	(21)	3405	3320	1653555
2623	19.3	7.0	6.6	chr17	63204136	63204483	(20052958)	+	L1MB4	LINE/L1	4278	4627	(1513)	1654417
13	21.5	0.0	4.8	chr17	63842651	63842692	(19414749)	+	(CCCGC)n	Simple_repeat	1	42	(0)	1655439
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
234	30.1	15.4	1.6	chr17	64137135	64137270	(19120171)	C	L2c	LINE/L2	(229)	3158	3001	1655970
2394	10.8	0.0	0.0	chr17	64137449	64137754	(19119687)	C	AluSz	SINE/Alu	(5)	307	2	1655973
1254	18.5	14.0	0.7	chr17	64920771	64921042	(18336399)	C	MER21B	LTR/ERVL	(554)	314	1	1657597
299	23.4	5.5	9.3	chr17	64921116	64921266	(18336175)	C	MER20B	DNA/hAT-Charlie	(638)	145	1	1657598
11	23.3	0.0	8.5	chr17	65693238	65693296	(17564145)	+	(CCCTGCC)n	Simple_repeat	1	59	(0)	1659139
768	24.5	2.9	7.7	chr17	66580611	66580897	(16676544)	C	L1ME3A	LINE/L1	(0)	6173	5901	1660494
913	26.0	7.9	7.7	chr17	66614863	66615367	(16642074)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	5	1660543
367	29.5	1.6	1.6	chr17	68162029	68162152	(15095289)	+	MLT1K	LTR/ERVL-MaLR	463	586	(9)	1663645
9367	7.8	14.7	0.7	chr17	68207675	68209028	(15048413)	+	LTR12C	LTR/ERV1	3	1578	(1)	1663744
244	26.9	14.7	0.0	chr17	68510465	68510557	(14746884)	C	MIRb	SINE/MIR	(121)	147	39	1664335
681	31.4	9.2	5.1	chr17	68715054	68715623	(14541818)	+	LTR81C	LTR/Gypsy	544	1139	(14)	1664685
3496	12.6	3.6	0.0	chr17	69299937	69300444	(13956997)	C	MER1A	DNA/hAT-Charlie	(1)	528	2	1665501
3687	10.9	1.3	0.4	chr17	69328236	69328759	(13928682)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	1665541
1617	27.6	6.1	6.6	chr17	69857804	69858708	(13398733)	C	L1MEg2	LINE/L1	(1979)	5475	4576	1666423
31	3.3	0.0	0.0	chr17	69858765	69858795	(13398646)	+	(TG)n	Simple_repeat	1	31	(0)	1666424
28	14.9	0.0	0.0	chr17	69858797	69858848	(13398593)	+	(AGAGAG)n	Simple_repeat	1	52	(0)	1666425
11433	10.5	0.5	0.2	chr17	70983531	70985106	(12272335)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1668096
2024	16.0	2.2	3.0	chr17	70985112	70985472	(12271969)	C	THE1B	LTR/ERVL-MaLR	(5)	359	2	1668096
215	31.1	8.1	0.8	chr17	71071946	71072066	(12185375)	C	MIR3	SINE/MIR	(80)	128	2	1668224
2207	28.5	8.3	3.0	chr17	71942963	71943880	(11313561)	+	ERV3-16A3_I-int	LTR/ERVL	7	973	(4023)	1669563
429	30.7	7.9	1.2	chr17	72322593	72322757	(10934684)	C	MIR	SINE/MIR	(79)	183	7	1670178
366	19.2	6.0	0.0	chr17	72322903	72322980	(10934461)	+	MLT1K	LTR/ERVL-MaLR	150	232	(363)	1670179
252	20.0	1.8	1.8	chr17	72986385	72986440	(10271001)	+	MER5A1	DNA/hAT-Charlie	51	106	(60)	1671372
627	23.1	1.4	0.7	chr17	72986572	72986715	(10270726)	+	MER5A1	DNA/hAT-Charlie	21	165	(1)	1671373
248	31.9	5.4	8.7	chr17	73177560	73177731	(10079710)	+	MamRTE1	LINE/RTE-BovB	111	276	(3536)	1671794
210	35.2	9.7	9.3	chr17	73177567	73177760	(10079681)	+	MamSINE1	SINE/tRNA-RTE	96	290	(0)	1671795
265	27.1	10.1	8.9	chr17	73474271	73474416	(9783025)	C	MIRb	SINE/MIR	(75)	193	46	1672393
2282	16.3	4.7	0.0	chr17	74064095	74064500	(9192941)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1673430
911	20.5	3.3	2.1	chr17	74184985	74185223	(9072218)	C	MER5C	DNA/hAT-Charlie	(67)	246	5	1673644
21	10.2	4.8	0.0	chr17	74334736	74334779	(8922662)	+	(AGAAAC)n	Simple_repeat	1	46	(0)	1673962
233	34.7	5.5	9.0	chr17	74457575	74457707	(8799734)	+	L2c	LINE/L2	3256	3383	(4)	1674191
203	31.6	4.8	1.2	chr17	75124765	75124844	(8132597)	+	MIR	SINE/MIR	91	173	(89)	1675404
1806	16.1	3.6	0.3	chr17	75411657	75411947	(7845494)	+	AluJb	SINE/Alu	1	301	(11)	1676059
277	34.1	11.0	4.5	chr17	75411948	75412117	(7845324)	+	L2c	LINE/L2	3203	3386	(1)	1676058
749	18.1	10.1	4.9	chr17	75585595	75585723	(7671718)	C	L1MA4	LINE/L1	(7)	6293	6144	1676421
2657	6.2	2.3	0.3	chr17	75585724	75586060	(7671381)	C	LTR14A	LTR/ERVK	(0)	344	1	1676422
16	9.1	5.4	2.6	chr17	75765228	75765264	(7492177)	+	(CCCGC)n	Simple_repeat	1	39	(0)	1676725
13	19.6	2.9	0.0	chr17	75844445	75844479	(7412962)	+	G-rich	Low_complexity	1	36	(0)	1676867
2110	13.2	0.0	0.7	chr17	75980055	75980364	(7277077)	+	AluJb	SINE/Alu	1	308	(4)	1677149
356	38.2	7.6	0.8	chr17	76013283	76013810	(7243631)	+	L2a	LINE/L2	2245	2811	(608)	1677228
2468	7.2	0.0	0.3	chr17	76029083	76029387	(7228054)	C	AluSx1	SINE/Alu	(5)	307	4	1677251
328	20.8	2.5	1.3	chr17	76268230	76268307	(6989134)	C	MIR3	SINE/MIR	(48)	160	82	1677703
906	25.3	5.6	0.8	chr17	76554769	76554903	(6702538)	+	MIR	SINE/MIR	12	155	(107)	1678268
2400	20.4	2.5	3.0	chr17	76588647	76589061	(6668380)	C	LTR40a	LTR/ERVL	(0)	519	106	1678334
2394	10.0	0.0	0.0	chr17	76788863	76789162	(6468279)	+	AluSx	SINE/Alu	4	303	(9)	1678754
3459	15.3	2.1	0.4	chr17	76789163	76789725	(6467716)	C	MER50	LTR/ERV1	(161)	573	1	1678755
3078	12.5	3.8	1.6	chr17	76894957	76895468	(6361973)	+	MER1A	DNA/hAT-Charlie	6	529	(0)	1678986
428	32.2	0.7	1.4	chr17	77020876	77021020	(6236421)	C	MIR	SINE/MIR	(1)	261	118	1679260
2516	13.5	1.2	3.4	chr17	77021033	77021468	(6235973)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	1679261
28	19.5	3.9	1.2	chr17	77141276	77141353	(6116088)	+	(CCCCCGC)n	Simple_repeat	1	81	(0)	1679538
7240	11.8	14.9	5.0	chr17	77525209	77526621	(5730820)	C	LTR12C	LTR/ERV1	(0)	1579	3	1680184
202	28.6	7.5	1.0	chr17	77559910	77560008	(5697433)	+	L2c	LINE/L2	3278	3383	(4)	1680241
184	23.9	0.0	2.1	chr17	78270802	78270848	(4986593)	C	MIR	SINE/MIR	(37)	225	180	1681534
320	22.8	14.4	1.9	chr17	78270838	78270940	(4986501)	+	L2b	LINE/L2	3258	3375	(0)	1681535
412	29.9	1.2	3.6	chr17	78583269	78583385	(4674056)	C	MLT1J	LTR/ERVL-MaLR	(313)	199	63	1682066
2388	16.4	1.4	7.1	chr17	78583386	78583586	(4673855)	+	MSTB	LTR/ERVL-MaLR	1	199	(227)	1682067
2182	14.5	0.0	0.0	chr17	78583587	78583897	(4673544)	+	AluSz	SINE/Alu	1	311	(1)	1682068
2380	9.7	0.0	0.0	chr17	78739937	78740235	(4517206)	C	AluSx1	SINE/Alu	(13)	299	1	1682354
441	23.1	0.8	9.7	chr17	78740371	78740514	(4516927)	C	MLT1M	LTR/ERVL-MaLR	(349)	323	193	1682355
2435	10.3	0.0	0.0	chr17	79753026	79753337	(3504104)	+	AluSx1	SINE/Alu	1	312	(0)	1683878
2083	14.1	0.0	0.7	chr17	79753571	79753876	(3503565)	+	AluSz6	SINE/Alu	1	304	(8)	1683879
1310	23.1	3.1	4.1	chr17	79860947	79861060	(3396381)	+	MLT1C	LTR/ERVL-MaLR	53	160	(307)	1684051
1804	22.4	5.8	3.0	chr17	79990580	79991086	(3266355)	C	L1MB3	LINE/L1	(5)	6178	5657	1684256
2577	7.2	0.0	0.0	chr17	81973152	81973458	(1283983)	+	AluY	SINE/Alu	3	309	(2)	1686991
766	26.4	1.7	2.8	chr17	81973459	81973722	(1283719)	+	L1MC4	LINE/L1	6576	6859	(1183)	1686989
2362	14.3	1.9	17.6	chr17	82176011	82176716	(1080725)	+	LTR14B	LTR/ERVK	15	607	(1)	1687271
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
603	27.2	4.7	3.2	chr18	3004598	3004848	(77368437)	C	MamRep137	DNA/TcMar-Tigger	(55)	455	201	1693583
1045	26.0	9.3	2.9	chr18	3162119	3162569	(77210716)	+	MER74B	LTR/ERVL	66	548	(74)	1693884
25	22.4	7.0	2.5	chr18	5543320	5543433	(74829852)	+	(GCGCCGC)n	Simple_repeat	1	122	(0)	1697365
393	4.9	22.8	0.0	chr18	8004657	8004717	(72368568)	C	MADE1	DNA/TcMar-Mariner	(0)	80	2	1700858
224	28.3	17.0	0.8	chr18	8138222	8138349	(72234936)	+	L2a	LINE/L2	61	213	(3206)	1701003
802	29.6	8.1	1.2	chr18	8138470	8138870	(72234415)	+	L2a	LINE/L2	1398	1828	(1591)	1701003
3855	13.9	1.8	1.3	chr18	9409488	9410522	(70962763)	C	L1M4	LINE/L1	(3542)	3102	1991	1702973
297	25.4	6.6	11.6	chr18	9410523	9410651	(70962634)	C	MLT1K	LTR/ERVL-MaLR	(18)	577	456	1702974
226	28.8	5.9	2.4	chr18	9410737	9410818	(70962467)	C	MLT1K	LTR/ERVL-MaLR	(282)	313	229	1702974
291	35.8	1.0	0.0	chr18	9828289	9828383	(70544902)	C	MER117	DNA/hAT-Charlie	(60)	137	42	1703717
1922	14.8	14.7	0.8	chr18	12764135	12764502	(67608783)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1708090
1083	25.5	2.7	6.6	chr18	12765183	12765530	(67607755)	+	MLT1A	LTR/ERVL-MaLR	40	373	(1)	1708093
7456	7.3	1.6	2.5	chr18	15343747	15344757	(65028528)	C	LTR5B	LTR/ERVK	(0)	1002	1	1711503
4271	17.6	4.0	2.1	chr18	21088530	21088582	(59284703)	+	L1MDa	LINE/L1	3431	3480	(3057)	1711881
1793	18.2	4.2	1.8	chr18	21088598	21088995	(59284290)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	1711883
937	16.9	14.1	4.3	chr18	22223402	22223611	(58149674)	+	L1MC1	LINE/L1	6098	6331	(2)	1714178
3730	12.4	3.8	0.0	chr18	22686475	22686983	(57686302)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	1714875
2317	11.8	0.0	0.3	chr18	23492778	23493090	(56880195)	+	AluSz	SINE/Alu	1	312	(0)	1716315
917	21.2	6.6	20.0	chr18	23493193	23493438	(56879847)	C	MSTC	LTR/ERVL-MaLR	(0)	428	210	1716316
198	27.6	7.2	0.8	chr18	23740615	23740731	(56632554)	+	L3	LINE/CR1	3740	3864	(235)	1716793
2698	13.3	4.2	1.4	chr18	24790465	24790882	(55582403)	+	MSTB1	LTR/ERVL-MaLR	3	432	(0)	1718467
2925	18.8	6.6	6.6	chr18	24964129	24964810	(55408475)	C	LTR8A	LTR/ERV1	(12)	715	34	1718748
7336	21.5	12.6	3.1	chr18	26442425	26444672	(53928613)	C	L1MEc	LINE/L1	(2850)	3469	915	1720925
1977	11.7	0.7	7.5	chr18	26699274	26699580	(53673705)	+	AluJo	SINE/Alu	1	286	(26)	1721376
2923	13.7	6.4	9.9	chr18	30044443	30045057	(50328228)	+	LTR14B	LTR/ERVK	17	608	(0)	1725802
13	6.5	8.8	2.7	chr18	30828661	30828694	(49544591)	+	A-rich	Low_complexity	1	37	(0)	1726852
9521	12.4	5.1	4.2	chr18	32951635	32952772	(47420513)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	494	1730114
66	0.0	0.0	0.0	chr18	33440286	33440344	(46932941)	+	(GGGGACTG)n	Simple_repeat	1	59	(0)	1730734
1134	19.6	1.4	0.4	chr18	33567689	33567964	(46805321)	+	L1ME1	LINE/L1	1290	1568	(4832)	1730892
13	21.5	4.7	0.0	chr18	34224930	34224972	(46148313)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	1731668
23	15.2	3.1	4.5	chr18	34224973	34224987	(46148298)	+	(CCCCT)n	Simple_repeat	30	69	(0)	1731667
13	17.6	2.5	2.4	chr18	34225082	34225121	(46148164)	+	(GCAGGCT)n	Simple_repeat	1	41	(0)	1731669
18734	13.6	2.8	5.8	chr18	34299761	34307732	(46065553)	+	L1MA3	LINE/L1	16	7724	(0)	1731759
3377	18.2	1.2	4.1	chr18	35730023	35730685	(44642600)	+	MER73	LTR/ERVL	1	644	(0)	1733736
695	27.2	17.5	0.9	chr18	42520412	42520749	(37852536)	+	LFSINE_Vert	SINE/tRNA	36	441	(18)	1742954
224	31.4	6.3	0.0	chr18	45509898	45510015	(34863270)	C	MIR3	SINE/MIR	(18)	190	65	1747013
241	35.8	0.0	1.2	chr18	45590358	45590439	(34782846)	+	LFSINE_Vert	SINE/tRNA	116	196	(263)	1747147
16137	11.1	2.9	1.4	chr18	45806325	45810512	(34562773)	+	L1PBa1	LINE/L1	251	4503	(2359)	1747462
1040	16.1	3.7	2.8	chr18	46722585	46722801	(33650484)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1749144
270	22.8	7.5	6.8	chr18	46722814	46722945	(33650340)	+	HAL1	LINE/L1	788	920	(1587)	1749143
19	29.0	0.0	2.8	chr18	46962857	46962927	(33410358)	+	(CCG)n	Simple_repeat	1	71	(0)	1749558
19	29.0	0.0	2.8	chr18	47028291	47028361	(33344924)	+	(CCG)n	Simple_repeat	1	71	(0)	1749581
2693	13.9	4.2	0.2	chr18	47767549	47767987	(32605298)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	1750769
2538	15.2	4.2	4.0	chr18	47767988	47768424	(32604861)	+	L1MD	LINE/L1	5144	5608	(634)	1750760
223	26.4	12.1	7.0	chr18	47971662	47971743	(32401542)	C	L2a	LINE/L2	(0)	3426	3343	1751090
3576	4.2	1.1	0.2	chr18	47971744	47972178	(32401107)	C	L1PA10	LINE/L1	(1)	6167	5729	1751091
16	11.1	0.0	0.0	chr18	48410449	48410477	(31962808)	+	(CCCCG)n	Simple_repeat	1	29	(0)	1751864
14	6.8	9.7	0.0	chr18	48902043	48902073	(31471212)	+	(GCAG)n	Simple_repeat	1	34	(0)	1752634
3287	12.1	2.0	0.0	chr18	49148841	49149318	(31223967)	C	MER1A	DNA/hAT-Charlie	(19)	510	23	1753031
19	18.4	4.1	0.0	chr18	49658318	49658366	(30714919)	+	(TATA)n	Simple_repeat	1	51	(0)	1753993
274	28.7	3.2	10.3	chr18	49658410	49658545	(30714740)	+	L2a	LINE/L2	2929	3054	(365)	1753984
1956	25.4	2.3	0.9	chr18	49658555	49659079	(30714206)	C	MLT1F	LTR/ERVL-MaLR	(7)	541	10	1753994
295	25.6	9.4	10.4	chr18	49670876	49670904	(30702381)	C	MIR3	SINE/MIR	(11)	197	174	1754016
1930	18.3	1.1	1.9	chr18	49670905	49671272	(30702013)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1754017
20	10.1	0.0	0.0	chr18	51196765	51196796	(29176489)	+	(CCG)n	Simple_repeat	1	32	(0)	1756515
35	27.0	0.9	0.9	chr18	51196911	51197018	(29176267)	+	(TCCTCC)n	Simple_repeat	1	109	(0)	1756516
18	0.0	0.0	0.0	chr18	51243784	51243803	(29129482)	+	(TG)n	Simple_repeat	1	20	(0)	1756606
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
3365	13.3	2.1	0.2	chr18	54770173	54770690	(25602595)	+	MER1A	DNA/hAT-Charlie	1	528	(1)	1761736
304	28.8	6.9	4.1	chr18	55905729	55905910	(24467375)	C	L2a	LINE/L2	(10)	3416	3205	1763356
5227	24.0	7.0	4.3	chr18	56800691	56802350	(23570935)	C	L1MC4	LINE/L1	(1046)	6996	5285	1764667
1290	12.3	4.7	0.5	chr18	57820504	57820707	(22552578)	+	L1MB3	LINE/L1	5784	5996	(187)	1766248
3017	8.5	3.0	0.0	chr18	57820742	57821130	(22552155)	+	MER1A	DNA/hAT-Charlie	129	529	(0)	1766249
361	34.1	2.9	2.3	chr18	58166542	58166715	(22206570)	C	MIR3	SINE/MIR	(16)	192	18	1766914
198	23.1	3.7	11.4	chr18	58166646	58166733	(22206552)	+	MamTip2	DNA/hAT-Tip100	41	121	(184)	1766915
486	29.9	10.6	2.0	chr18	59919510	59919958	(20453327)	+	L2a	LINE/L2	2541	3386	(40)	1769787
2150	10.4	0.3	2.3	chr18	59920021	59920327	(20452958)	C	AluSz	SINE/Alu	(11)	301	1	1769788
208	32.9	2.1	1.8	chr18	62186367	62186485	(18186800)	+	MIR3	SINE/MIR	108	232	(36)	1773093
1532	16.0	10.8	0.3	chr18	62943525	62943806	(17429479)	C	MSTB	LTR/ERVL-MaLR	(111)	315	1	1774312
3377	11.6	2.6	0.2	chr18	63092663	63093154	(17280131)	+	MER1A	DNA/hAT-Charlie	20	523	(6)	1774548
393	29.2	3.1	8.0	chr18	63258339	63258539	(17114746)	+	HAL1ME	LINE/L1	2275	2465	(0)	1774782
296	38.0	0.0	0.0	chr18	63258778	63258877	(17114408)	+	Tigger19b	DNA/TcMar-Tigger	450	549	(1)	1774783
9332	13.1	4.4	1.8	chr18	65121632	65123169	(15250116)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	1777338
4384	12.2	6.4	6.9	chr18	70262784	70263621	(10109664)	+	THE1B-int	LTR/ERVL-MaLR	1	833	(747)	1784291
1903	17.6	6.9	0.3	chr18	70334246	70334582	(10038703)	+	MLT1A0	LTR/ERVL-MaLR	5	365	(0)	1784421
1474	22.2	8.3	0.3	chr18	77159302	77159635	(3213650)	+	MLT1A0	LTR/ERVL-MaLR	1	363	(2)	1793144
12	10.3	6.1	2.9	chr18	78766904	78766936	(1606349)	+	(TCCTC)n	Simple_repeat	1	35	(0)	1794861
1720	19.1	7.2	0.0	chr18	79677260	79677620	(695665)	C	MER57B2	LTR/ERV1	(0)	403	15	1795683
11208	10.4	1.0	1.3	chr18	80000940	80001968	(371317)	+	THE1B-int	LTR/ERVL-MaLR	558	1580	(0)	1796011
11534	13.3	2.9	2.2	chr18	80021997	80023821	(349464)	C	LTR25-int	LTR/ERV1	(4813)	2375	539	1796043
14	29.1	2.3	4.5	chr19	663354	663439	(57954177)	+	G-rich	Low_complexity	1	88	(0)	1797315
268	24.9	21.5	0.0	chr19	663475	663667	(57953949)	+	L2a	LINE/L2	2922	3167	(259)	1797316
244	35.8	3.4	0.9	chr19	925385	925516	(57692100)	C	MIRc	SINE/MIR	(106)	162	25	1797903
34	0.0	0.0	0.0	chr19	929482	929512	(57688104)	+	(GTG)n	Simple_repeat	1	31	(0)	1797907
2582	6.1	0.6	0.0	chr19	966178	966488	(57651128)	+	AluSp	SINE/Alu	1	313	(0)	1797985
15	24.6	1.9	1.9	chr19	1028682	1028743	(57588873)	+	G-rich	Low_complexity	1	62	(0)	1798104
2460	7.9	0.0	0.3	chr19	1247129	1247432	(57370184)	C	AluSc	SINE/Alu	(6)	303	1	1798459
197	36.8	2.2	3.6	chr19	1247433	1247533	(57370083)	+	L2c	LINE/L2	3078	3176	(211)	1798457
307	25.0	19.4	0.0	chr19	1445568	1445671	(57171945)	+	L2c	LINE/L2	3288	3423	(3)	1798791
12	18.3	5.4	0.0	chr19	1469370	1469406	(57148210)	+	(CGCCC)n	Simple_repeat	1	39	(0)	1798828
816	26.4	9.9	3.4	chr19	1624596	1624853	(56992763)	+	Tigger17	DNA/TcMar-Tigger	1	285	(2388)	1799162
12	19.8	2.3	4.4	chr19	1853415	1853458	(56764158)	+	(AGGCC)n	Simple_repeat	1	45	(0)	1799628
195	30.0	7.7	0.0	chr19	2309669	2309728	(56307888)	C	MIRc	SINE/MIR	(112)	156	92	1800521
221	31.4	8.1	2.8	chr19	2497228	2497368	(56120248)	C	MIR3	SINE/MIR	(58)	150	2	1800941
1028	22.6	1.6	0.8	chr19	2497408	2497657	(56119959)	C	MLT1D	LTR/ERVL-MaLR	(1)	504	253	1800942
513	26.5	0.0	2.9	chr19	2631446	2631585	(55986031)	C	MER58A	DNA/hAT-Charlie	(80)	144	9	1801291
330	18.4	0.0	5.0	chr19	2631587	2631666	(55985950)	C	MER58A	DNA/hAT-Charlie	(140)	84	9	1801292
319	15.9	0.0	4.5	chr19	2631668	2631733	(55985883)	C	MER58A	DNA/hAT-Charlie	(140)	84	22	1801292
215	36.5	0.0	5.9	chr19	3074362	3074463	(55543153)	+	MIR3	SINE/MIR	50	145	(63)	1802332
1040	29.7	5.4	4.1	chr19	3146579	3147223	(55470393)	+	L2a	LINE/L2	2603	3262	(164)	1802507
416	23.9	3.9	1.4	chr19	3244226	3245438	(55372178)	+	(TG)n	Simple_repeat	1	1260	(0)	1802728
819	28.8	15.2	0.9	chr19	3692407	3693099	(54924517)	+	L2a	LINE/L2	2485	3304	(122)	1803795
306	25.2	13.7	0.9	chr19	4131134	4131241	(54486375)	+	L1M5	LINE/L1	5560	5683	(559)	1804812
380	27.1	8.3	0.0	chr19	4131247	4131390	(54486226)	+	L1ME3F	LINE/L1	5705	5861	(382)	1804813
16	16.4	0.0	0.0	chr19	4343754	4343787	(54273829)	+	(GGACGA)n	Simple_repeat	1	34	(0)	1805403
28	27.4	0.0	3.9	chr19	4343803	4343905	(54273711)	+	G-rich	Low_complexity	1	103	(0)	1805404
1684	25.8	14.2	0.9	chr19	4350073	4351097	(54266519)	C	L2a	LINE/L2	(256)	3170	1964	1805419
23	26.0	1.3	1.3	chr19	4400558	4400634	(54216982)	+	(CGCCCG)n	Simple_repeat	1	77	(0)	1805510
2398	7.7	0.7	0.0	chr19	4435081	4435377	(54182239)	C	AluYc	SINE/Alu	(0)	299	1	1805579
2240	11.2	0.7	0.3	chr19	4571937	4572240	(54045376)	C	AluSx	SINE/Alu	(7)	305	1	1805899
1948	14.9	1.4	1.4	chr19	4656944	4657239	(53960377)	+	AluJb	SINE/Alu	1	296	(16)	1806133
2272	12.2	0.0	0.0	chr19	4786889	4787191	(53830425)	+	AluSc	SINE/Alu	1	303	(6)	1806470
618	30.6	0.0	7.3	chr19	4787192	4787356	(53830260)	C	MER63C	DNA/hAT-Blackjack	(643)	287	139	1806469
2325	9.8	0.0	0.0	chr19	4787381	4787687	(53829929)	C	AluSx1	SINE/Alu	(5)	307	1	1806471
231	22.2	0.0	1.8	chr19	4838261	4838315	(53779301)	+	MLT1A1	LTR/ERVL-MaLR	355	408	(0)	1806625
315	31.2	7.8	1.0	chr19	4851623	4851933	(53765683)	C	L2	LINE/L2	(435)	2984	2651	1806670
28017	7.6	1.3	1.3	chr19	5159634	5165376	(53452240)	C	HERV9-int	LTR/ERV1	(3458)	4978	29	1807255
1040	23.4	5.8	0.4	chr19	5170244	5170722	(53446894)	C	L2a	LINE/L2	(254)	3172	2659	1807269
1329	23.6	6.7	1.5	chr19	5354366	5354825	(53262791)	C	L2a	LINE/L2	(289)	3137	2644	1807743
2283	11.4	0.0	0.0	chr19	5377274	5377570	(53240046)	+	AluSx1	SINE/Alu	1	297	(15)	1807812
1161	26.7	1.4	3.0	chr19	5377571	5377801	(53239815)	C	L2a	LINE/L2	(530)	2889	2658	1807810
732	27.8	2.4	1.4	chr19	5504093	5504387	(53113229)	+	L2a	LINE/L2	2565	2862	(557)	1808176
499	32.2	15.5	6.8	chr19	5515759	5516344	(53101272)	C	MamGypLTR3a	LTR/Gypsy	(119)	862	217	1808211
583	28.6	21.0	0.3	chr19	5536013	5536321	(53081295)	C	L2b	LINE/L2	(1)	3374	2985	1808287
2673	24.5	14.6	1.8	chr19	5632229	5632734	(52984882)	C	L1MC4	LINE/L1	(2)	8040	7445	1808493
3217	9.5	1.2	5.0	chr19	5775677	5775948	(52841668)	C	LTR3B_	LTR/ERVK	(232)	267	1	1808823
128	29.0	1.7	0.7	chr19	6529393	6529813	(52087803)	+	GA-rich	Low_complexity	1	428	(0)	1810494
192	26.3	1.3	5.9	chr19	6586929	6587548	(52030068)	+	GA-rich	Low_complexity	110	754	(0)	1810652
2203	22.3	7.1	1.3	chr19	6587557	6587714	(52029902)	+	MER54A	LTR/ERVL	334	512	(389)	1810655
1630	13.9	1.4	2.8	chr19	6587715	6588001	(52029615)	C	AluJr	SINE/Alu	(17)	295	13	1810656
362	16.6	2.3	0.0	chr19	6669613	6669686	(51947930)	C	MIR3	SINE/MIR	(91)	171	89	1810867
47	2.3	0.0	0.0	chr19	6669738	6669782	(51947834)	+	(AC)n	Simple_repeat	1	45	(0)	1810868
912	19.5	0.5	6.2	chr19	7069950	7070173	(51547443)	+	MER20	DNA/hAT-Charlie	9	219	(0)	1811931
60	1.8	0.0	0.0	chr19	7081151	7081206	(51536410)	+	(GT)n	Simple_repeat	1	56	(0)	1811951
3808	12.9	0.0	0.2	chr19	7170001	7170526	(51447090)	+	MER1A	DNA/hAT-Charlie	1	525	(4)	1812173
1668	17.3	2.5	1.1	chr19	7279706	7279983	(51337633)	+	AluJb	SINE/Alu	14	295	(17)	1812496
9609	10.8	7.5	3.8	chr19	7756911	7758476	(50859140)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	1813660
2417	8.1	0.0	0.7	chr19	8806417	8806714	(49810902)	+	AluSc	SINE/Alu	1	296	(13)	1816156
949	23.8	4.8	9.7	chr19	8806715	8806974	(49810642)	C	L1MEg	LINE/L1	(4653)	2190	1947	1816155
380	24.3	5.5	0.7	chr19	8806958	8807111	(49810505)	C	L1MEg	LINE/L1	(5329)	1514	1409	1816155
2069	17.3	10.1	5.9	chr19	9407960	9408385	(49209231)	+	MER73	LTR/ERVL	104	569	(75)	1817380
2307	18.8	5.4	1.6	chr19	9430563	9431064	(49186552)	+	MER73	LTR/ERVL	27	548	(96)	1817415
33559	12.2	1.3	0.8	chr19	9454393	9459482	(49158134)	+	HERVK9-int	LTR/ERVK	1	4889	(1132)	1817462
1456	13.3	20.3	2.6	chr19	9459486	9459987	(49157629)	C	LTR14B	LTR/ERVK	(0)	608	16	1817463
2895	13.8	6.5	0.0	chr19	9462120	9462598	(49155018)	+	MER9a3	LTR/ERVK	1	512	(0)	1817462
5329	25.6	3.4	4.1	chr19	10030209	10031775	(48585841)	C	HERVH-int	LTR/ERV1	(3725)	2804	1518	1818732
408	28.4	5.4	4.5	chr19	10223508	10223728	(48393888)	C	MamRep38	DNA/hAT	(69)	226	4	1819204
316	32.3	2.9	2.9	chr19	10702319	10702455	(47915161)	+	MIRb	SINE/MIR	74	210	(58)	1820457
240	27.2	3.6	0.0	chr19	10864884	10864964	(47752652)	C	L2b	LINE/L2	(1020)	2399	2316	1820864
2358	8.6	1.6	0.0	chr19	10865144	10865446	(47752170)	C	AluSx1	SINE/Alu	(4)	308	1	1820872
204	29.2	13.3	4.0	chr19	10888324	10888504	(47729112)	+	MIR1_Amn	SINE/MIR	33	224	(38)	1820934
236	26.9	0.0	0.0	chr19	11344712	11344763	(47272853)	+	MER91A	DNA/hAT-Tip100	1	52	(144)	1822104
25	18.8	0.0	0.0	chr19	11344796	11344846	(47272770)	+	(CTCCC)n	Simple_repeat	1	51	(0)	1822105
222	23.7	4.8	6.3	chr19	11455786	11455848	(47161768)	+	L2c	LINE/L2	3326	3387	(0)	1822374
196	24.7	5.8	4.7	chr19	11455965	11456049	(47161567)	+	L2b	LINE/L2	3007	3092	(283)	1822375
2575	21.3	5.6	0.2	chr19	11821833	11822388	(46795228)	C	MER54A	LTR/ERVL	(313)	588	1	1823199
2494	22.0	5.8	0.2	chr19	11895206	11895760	(46721856)	C	MER54A	LTR/ERVL	(313)	588	1	1823340
661	15.2	0.0	0.0	chr19	11988309	11988407	(46629209)	+	AluSx	SINE/Alu	1	99	(213)	1823530
6408	10.7	2.8	1.2	chr19	11988415	11989352	(46628264)	C	LTR13_	LTR/ERVK	(0)	954	1	1823531
2213	12.6	0.0	1.3	chr19	12175186	12175494	(46442122)	C	AluSx	SINE/Alu	(7)	305	1	1823953
2811	20.2	4.5	5.6	chr19	12175496	12176188	(46441428)	C	L1MC1	LINE/L1	(8)	6325	5641	1823954
4674	8.4	4.7	5.5	chr19	12229912	12230556	(46387060)	C	LTR19-int	LTR/ERV1	(4624)	962	308	1824044
1065	10.1	0.7	1.3	chr19	12230551	12230700	(46386916)	C	LTR19-int	LTR/ERV1	(5437)	149	1	1824044
2407	10.5	13.8	0.0	chr19	12230701	12231119	(46386497)	C	LTR19A	LTR/ERV1	(0)	486	1	1824044
3239	11.1	6.9	8.0	chr19	12450589	12451187	(46166429)	+	LTR14B	LTR/ERVK	17	608	(0)	1824469
9115	9.8	0.2	0.0	chr19	12451188	12452383	(46165233)	+	HERVK14-int	LTR/ERVK	1	1199	(4897)	1824469
1322	21.8	3.3	8.8	chr19	12525674	12526060	(46091556)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1824614
1472	18.7	7.2	2.1	chr19	12526065	12526392	(46091224)	C	MLT1A0-int	LTR/ERVL-MaLR	(4)	1731	1386	1824614
794	21.7	6.5	0.0	chr19	12917972	12918128	(45699488)	+	AluJb	SINE/Alu	131	298	(14)	1825527
439	25.0	8.4	0.8	chr19	15438212	15438332	(43179284)	+	L2b	LINE/L2	3245	3375	(0)	1831800
10810	25.0	2.0	3.5	chr19	15829642	15834725	(42782891)	+	HERVH-int	LTR/ERV1	791	5453	(2260)	1832598
3442	14.1	0.6	2.8	chr19	15938272	15938812	(42678804)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	1832812
20	3.2	2.9	2.9	chr19	16062108	16062144	(42555472)	+	(CACCA)n	Simple_repeat	1	37	(0)	1833030
212	29.9	1.8	7.0	chr19	16062182	16062296	(42555320)	+	L2c	LINE/L2	3075	3183	(204)	1833031
2270	8.3	1.0	2.0	chr19	16062324	16062623	(42554993)	+	AluSx	SINE/Alu	1	297	(15)	1833032
290	25.2	2.9	0.0	chr19	16628871	16628969	(41988647)	C	MER20	DNA/hAT-Charlie	(3)	216	115	1834294
4297	10.7	3.1	2.7	chr19	16881719	16882390	(41735226)	+	LTR76	LTR/ERV1	1	675	(0)	1835005
497	23.0	0.9	0.0	chr19	17496188	17496300	(41121316)	+	MIR	SINE/MIR	30	143	(119)	1836516
239	33.3	14.3	1.4	chr19	17538831	17538976	(41078640)	+	MER91A	DNA/hAT-Tip100	1	168	(28)	1836642
462	30.7	8.0	4.9	chr19	17850193	17850517	(40767099)	C	L2b	LINE/L2	(54)	3321	2986	1837435
2285	10.7	0.0	0.0	chr19	18305625	18305922	(40311694)	+	AluSz	SINE/Alu	1	298	(14)	1838585
306	35.6	5.7	0.6	chr19	18416486	18416841	(40200775)	+	L2c	LINE/L2	2798	3187	(188)	1838866
270	28.7	5.0	2.1	chr19	19430092	19430187	(39187429)	C	MER58A	DNA/hAT-Charlie	(88)	136	38	1840976
2809	4.7	1.4	0.0	chr19	19975826	19976164	(38641452)	C	LTR14A	LTR/ERVK	(0)	344	1	1841905
1645	13.8	4.9	0.4	chr19	20272908	20273139	(38344477)	+	AluSg	SINE/Alu	1	243	(67)	1842379
2961	14.6	5.1	8.5	chr19	20273140	20273754	(38343862)	C	LTR14B	LTR/ERVK	(0)	608	16	1842380
2735	15.6	3.4	8.0	chr19	20321731	20322352	(38295264)	C	LTR14B	LTR/ERVK	(0)	608	17	1842455
6196	7.8	0.2	1.0	chr19	20469213	20470077	(38147539)	C	HERVL66-int	LTR/ERVL	(2891)	1438	581	1842693
2731	14.5	3.7	9.9	chr19	20470078	20470711	(38146905)	C	LTR14B	LTR/ERVK	(0)	608	16	1842694
4210	6.5	5.9	0.7	chr19	20709728	20710303	(37907313)	C	LTR14B	LTR/ERVK	(0)	608	1	1843029
3090	12.9	0.6	0.0	chr19	21077237	21077716	(37539900)	+	MSTA-int	LTR/ERVL-MaLR	1149	1631	(0)	1843486
289	15.7	0.0	0.0	chr19	21077717	21077767	(37539849)	+	MSTA	LTR/ERVL-MaLR	1	51	(377)	1843486
2629	3.9	0.0	0.7	chr19	21503983	21504294	(37113322)	C	AluY	SINE/Alu	(0)	311	1	1844136
3831	13.1	8.3	5.4	chr19	21519107	21519758	(37097858)	+	LTR76	LTR/ERV1	3	675	(0)	1844159
15058	16.2	2.5	3.3	chr19	21519759	21519849	(37097767)	C	L1PREC2	LINE/L1	(3566)	2580	2482	1844153
3379	13.6	1.8	5.5	chr19	23876578	23877146	(34740470)	C	LTR14	LTR/ERVK	(0)	548	1	1847308
967	21.2	0.6	0.5	chr19	27731023	27733277	(30884339)	C	ALR/Alpha	Satellite/centr	(40)	2256	1	1847870
7970	5.6	0.8	1.3	chr19	27801831	27802842	(30814774)	C	LTR13	LTR/ERVK	(0)	1007	1	1847934
799	33.8	5.2	1.6	chr19	28187414	28187843	(30429773)	C	MLT1K	LTR/ERVL-MaLR	(127)	468	23	1848395
26	0.0	0.0	0.0	chr19	28216260	28216284	(30401332)	+	(TGTTTT)n	Simple_repeat	1	25	(0)	1848434
16	4.5	0.0	0.0	chr19	28216399	28216421	(30401195)	+	(ACA)n	Simple_repeat	1	23	(0)	1848435
1655	16.2	1.5	1.9	chr19	28480728	28480992	(30136624)	C	AluJb	SINE/Alu	(48)	264	1	1848838
12670	12.0	3.3	1.4	chr19	28525895	28528650	(30088966)	+	PABL_A-int	LTR/ERV1	2332	5944	(2)	1848916
266	31.1	1.9	1.0	chr19	28868861	28868964	(29748652)	+	L2a	LINE/L2	3096	3200	(226)	1849355
2209	23.0	7.4	4.6	chr19	29138758	29139495	(29478121)	+	LTR8B	LTR/ERV1	16	813	(7)	1849794
1571	27.6	8.1	5.8	chr19	29171866	29172323	(29445293)	+	L1MEf	LINE/L1	1683	2061	(5272)	1849852
1772	18.3	0.8	8.6	chr19	29172324	29172717	(29444899)	+	MLT1A0	LTR/ERVL-MaLR	3	365	(0)	1849853
496	27.9	9.7	0.0	chr19	29329842	29329981	(29287635)	C	MIRb	SINE/MIR	(27)	241	87	1850089
896	20.2	3.9	5.4	chr19	29511689	29514831	(29102785)	+	GA-rich	Low_complexity	1	3266	(0)	1850347
336	31.4	2.4	2.4	chr19	29584045	29584168	(29033448)	+	L1MEd	LINE/L1	1979	2102	(4984)	1850443
457	27.3	1.7	6.5	chr19	29584227	29584410	(29033206)	C	LTR16A2	LTR/ERVL	(69)	426	252	1850444
1432	15.4	0.0	0.0	chr19	29689189	29689396	(28928220)	C	AluJr	SINE/Alu	(103)	209	2	1850641
1077	26.7	1.1	8.9	chr19	29689397	29689525	(28928091)	C	L1MB7	LINE/L1	(1152)	4994	4866	1850638
868	30.3	8.7	5.8	chr19	29689532	29690008	(28927608)	C	L2a	LINE/L2	(1604)	1815	1318	1850634
17	4.0	0.0	3.6	chr19	29694704	29694731	(28922885)	+	(GGCCT)n	Simple_repeat	1	28	(0)	1850651
1811	11.3	0.0	0.4	chr19	29716868	29717115	(28900501)	+	AluSx	SINE/Alu	2	248	(64)	1850685
274	21.6	1.3	0.0	chr19	29904071	29904144	(28713472)	C	L1M5	LINE/L1	(2867)	3279	3205	1851102
283	17.6	8.5	1.6	chr19	29904249	29904345	(28713271)	+	MLT1H	LTR/ERVL-MaLR	375	549	(0)	1851103
1990	13.7	7.0	4.0	chr19	29938158	29938531	(28679085)	C	MSTB	LTR/ERVL-MaLR	(40)	386	1	1851197
199	31.4	5.5	1.1	chr19	29938537	29938623	(28678993)	+	L2b	LINE/L2	3247	3337	(38)	1851198
16	3.0	4.9	7.0	chr19	29938641	29938678	(28678938)	+	(AAT)n	Simple_repeat	1	37	(0)	1851199
248	30.8	2.2	14.5	chr19	29967718	29967869	(28649747)	+	MIRc	SINE/MIR	2	134	(134)	1851242
2508	22.1	1.8	1.4	chr19	30082231	30082785	(28534831)	C	MER74A	LTR/ERVL	(0)	558	2	1851365
2391	19.5	2.6	0.0	chr19	30164260	30164674	(28452942)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1851492
15	4.8	0.0	0.0	chr19	30226674	30226695	(28390921)	+	(AAAT)n	Simple_repeat	1	22	(0)	1851576
466	32.0	13.8	3.9	chr19	30637020	30637507	(27980109)	C	LTR78	LTR/ERV1	(619)	685	142	1852138
3723	18.7	7.8	1.2	chr19	30928041	30928804	(27688812)	+	LTR8B	LTR/ERV1	2	820	(0)	1852463
777	24.4	5.7	0.0	chr19	31013689	31013885	(27603731)	C	MER121	DNA/hAT?	(155)	246	38	1852602
255	32.5	5.0	4.0	chr19	31501707	31501893	(27115723)	+	MIRb	SINE/MIR	10	196	(72)	1853328
1010	18.2	1.1	0.0	chr19	32013514	32013700	(26603916)	+	L1MC4a	LINE/L1	7691	7879	(3)	1854072
462	31.4	12.8	7.3	chr19	32135764	32136368	(26481248)	C	L2b	LINE/L2	(836)	2583	1943	1854271
919	25.3	0.7	4.3	chr19	32249399	32249679	(26367937)	+	Charlie29a	DNA/hAT-Charlie	330	600	(119)	1854469
1923	14.5	0.3	4.1	chr19	32673872	32674188	(25943428)	+	AluJr	SINE/Alu	8	312	(0)	1855282
2174	11.5	0.4	0.0	chr19	32950277	32950554	(25667062)	+	AluSp	SINE/Alu	1	279	(34)	1855794
1286	26.9	10.4	3.9	chr19	32950599	32951162	(25666454)	+	L1ME3A	LINE/L1	5569	6173	(0)	1855795
262	33.0	2.2	6.9	chr19	32967572	32967810	(25649806)	C	L2c	LINE/L2	(170)	3217	2997	1855832
245	27.9	17.9	3.0	chr19	33143855	33144090	(25473526)	C	MamGypLTR3	LTR/Gypsy	(4)	890	612	1856278
2431	8.1	0.0	0.0	chr19	33144203	33144499	(25473117)	C	AluSx	SINE/Alu	(15)	297	1	1856279
3884	11.7	0.2	0.2	chr19	33159690	33160218	(25457398)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	1856321
3598	9.3	6.4	0.0	chr19	33164748	33165241	(25452375)	C	MER1A	DNA/hAT-Charlie	(0)	529	2	1856332
12	18.0	10.0	0.0	chr19	33302503	33302552	(25315064)	+	(CGCCCG)n	Simple_repeat	1	55	(0)	1856556
2033	12.5	0.7	0.0	chr19	33618691	33618978	(24998638)	C	AluSz6	SINE/Alu	(22)	290	1	1857055
715	27.5	19.6	3.0	chr19	33619236	33619565	(24998051)	C	LTR84a	LTR/ERVL	(363)	398	1	1857056
2893	33.1	6.6	6.8	chr19	33742649	33743293	(24874323)	C	HERV16-int	LTR/ERVL	(3255)	1741	1130	1857247
12	18.1	0.0	3.0	chr19	33781135	33781167	(24836449)	+	(TTTTAC)n	Simple_repeat	1	33	(0)	1857299
25	26.9	3.8	1.8	chr19	33795641	33795746	(24821870)	+	GA-rich	Low_complexity	1	110	(0)	1857330
1302	21.0	3.3	0.0	chr19	33938417	33938711	(24678905)	C	L1MB3	LINE/L1	(30)	6153	5849	1857583
276	27.1	11.9	4.0	chr19	33938723	33938822	(24678794)	C	MIRc	SINE/MIR	(63)	205	97	1857584
2425	15.7	5.3	1.4	chr19	33945984	33946159	(24671457)	+	MSTB1	LTR/ERVL-MaLR	1	181	(251)	1857597
1668	10.8	8.2	2.9	chr19	33946160	33946400	(24671216)	+	AluSx1	SINE/Alu	58	312	(0)	1857598
206	23.1	4.4	11.0	chr19	33972799	33972838	(24644778)	+	L2b	LINE/L2	3307	3347	(28)	1857642
2455	15.3	3.2	3.9	chr19	33972839	33973273	(24644343)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1857643
345	26.9	11.1	6.6	chr19	34120689	34121038	(24496578)	+	L1M4b	LINE/L1	3469	3836	(3170)	1857919
785	31.3	10.0	1.2	chr19	34121039	34121455	(24496161)	+	L1MEf	LINE/L1	17	474	(5949)	1857940
3144	9.5	12.8	1.3	chr19	34479508	34479974	(24137642)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1858730
2120	13.4	0.0	0.3	chr19	34508077	34508374	(24109242)	C	AluSx1	SINE/Alu	(15)	297	1	1858780
280	33.6	2.7	0.7	chr19	34595019	34595165	(24022451)	+	L1MEg	LINE/L1	856	1005	(5079)	1858887
3792	9.8	1.6	2.5	chr19	34595166	34595718	(24021898)	C	LTR14	LTR/ERVK	(0)	548	1	1858888
2942	21.3	3.8	6.8	chr19	34606929	34607891	(24009725)	C	L1MA4A	LINE/L1	(181)	6122	5198	1858902
17	0.0	0.0	0.0	chr19	34677161	34677179	(23940437)	+	(A)n	Simple_repeat	1	19	(0)	1858988
271	30.5	15.5	4.1	chr19	34688017	34688187	(23929429)	+	MIR	SINE/MIR	31	224	(38)	1859001
3845	10.1	10.4	0.3	chr19	34711792	34712390	(23905226)	+	LTR9C	LTR/ERV1	1	666	(0)	1859028
6051	11.2	14.5	2.4	chr19	34965025	34966107	(23651509)	+	MER11B	LTR/ERVK	1	1236	(0)	1859404
928	15.7	2.4	0.1	chr19	34973115	34973285	(23644331)	C	MLT1E3	LTR/ERVL-MaLR	(8)	616	372	1859418
550	22.0	2.8	3.4	chr19	34973392	34973537	(23644079)	+	MER5A1	DNA/hAT-Charlie	1	145	(21)	1859419
973	31.8	4.5	5.7	chr19	35055948	35056437	(23561179)	+	L2a	LINE/L2	2925	3408	(18)	1859610
218	20.7	4.9	0.0	chr19	35056460	35056517	(23561099)	C	L2	LINE/L2	(595)	2824	2764	1859611
374	31.2	6.2	2.3	chr19	35056627	35056807	(23560809)	+	L2b	LINE/L2	3214	3425	(1)	1859612
1120	22.9	7.1	8.1	chr19	35216987	35217370	(23400246)	+	MLT1H	LTR/ERVL-MaLR	170	549	(0)	1859962
1538	18.6	6.7	8.9	chr19	35217514	35217896	(23399720)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	1859964
1496	17.8	13.3	0.4	chr19	35375155	35375423	(23242193)	+	AluJo	SINE/Alu	1	309	(3)	1860272
93	3.1	2.0	4.7	chr19	35375426	35375571	(23242045)	+	(AAGA)n	Simple_repeat	1	149	(0)	1860273
804	13.1	3.2	2.5	chr19	35375591	35375712	(23241904)	+	AluJb	SINE/Alu	187	309	(3)	1860274
2290	11.9	0.0	0.6	chr19	35385662	35385973	(23231643)	C	AluSx1	SINE/Alu	(2)	310	1	1860296
11223	11.9	4.9	3.8	chr19	35385974	35386125	(23231491)	C	LOR1-int	LTR/ERV1	(5987)	2133	2001	1860294
2184	11.0	0.0	0.0	chr19	35386126	35386453	(23231163)	C	AluSx	SINE/Alu	(0)	312	5	1860297
689	28.1	3.0	10.5	chr19	35431154	35431681	(23185935)	+	L2b	LINE/L2	2811	3294	(81)	1860399
427	30.2	14.6	0.0	chr19	35701639	35701820	(22915796)	+	MIR	SINE/MIR	50	262	(0)	1861015
2454	9.3	0.0	0.0	chr19	35701851	35702162	(22915454)	C	AluSx1	SINE/Alu	(0)	312	1	1861016
196	27.4	4.8	4.2	chr19	35757164	35757360	(22860256)	C	MIRc	SINE/MIR	(13)	255	3	1861078
1827	13.5	4.3	0.0	chr19	35859763	35860028	(22757588)	+	AluSx	SINE/Alu	1	278	(34)	1861323
800	9.7	0.0	23.7	chr19	35947304	35947510	(22670106)	+	AluJr	SINE/Alu	140	297	(15)	1861521
49	0.0	0.0	0.0	chr19	35947598	35947639	(22669977)	+	(GT)n	Simple_repeat	1	42	(0)	1861522
1868	8.6	7.9	0.0	chr19	35947640	35947894	(22669722)	C	AluSc8	SINE/Alu	(34)	277	1	1861523
2023	10.9	0.4	0.7	chr19	36070146	36070419	(22547197)	C	AluSx1	SINE/Alu	(0)	312	40	1861805
757	33.1	10.8	4.5	chr19	36070670	36070925	(22546691)	C	Kanga11a	DNA/TcMar-Tc2	(439)	531	244	1861806
1925	9.9	0.4	5.4	chr19	36238830	36239127	(22378489)	+	MER1B	DNA/hAT-Charlie	57	339	(0)	1862201
12679	0.5	0.1	2.1	chr19	36272948	36274541	(22343075)	+	SST1	Satellite/centr	1	1563	(0)	1862257
12766	0.4	0.0	2.1	chr19	36275489	36277084	(22340532)	+	SST1	Satellite/centr	1	1563	(0)	1862260
35	25.0	0.0	2.1	chr19	36277085	36277177	(22340439)	+	(GT)n	Simple_repeat	1	93	(0)	1862261
11819	0.6	0.1	2.1	chr19	36278044	36279637	(22337979)	+	SST1	Satellite/centr	1	1563	(0)	1862263
11863	0.4	0.1	2.1	chr19	36280578	36282171	(22335445)	+	SST1	Satellite/centr	1	1563	(0)	1862266
35	25.0	0.0	2.1	chr19	36282172	36282264	(22335352)	+	(GT)n	Simple_repeat	1	93	(0)	1862267
11913	0.4	0.0	2.1	chr19	36283115	36284710	(22332906)	+	SST1	Satellite/centr	1	1563	(0)	1862269
36	22.3	1.1	2.1	chr19	36287242	36287333	(22330283)	+	(GT)n	Simple_repeat	1	93	(0)	1862273
56	3.5	0.0	1.6	chr19	36287344	36287404	(22330212)	+	(TC)n	Simple_repeat	1	61	(0)	1862274
11933	0.3	0.0	2.1	chr19	36300840	36302435	(22315181)	+	SST1	Satellite/centr	1	1563	(0)	1862290
11845	0.5	0.1	2.1	chr19	36303372	36304965	(22312651)	+	SST1	Satellite/centr	1	1563	(0)	1862293
718	21.9	1.7	0.6	chr19	36316150	36316319	(22301297)	C	MER5A	DNA/hAT-Charlie	(8)	181	10	1862309
2146	13.0	0.7	0.0	chr19	36413131	36413423	(22204193)	+	AluSx1	SINE/Alu	1	295	(17)	1862492
564	29.1	4.4	1.9	chr19	36413424	36413565	(22204051)	+	L1ME4a	LINE/L1	5721	5869	(255)	1862491
2751	22.0	4.0	5.8	chr19	36562219	36562491	(22055125)	+	MLT1A1-int	LTR/ERVL-MaLR	1476	1735	(0)	1862791
1433	14.0	18.4	4.0	chr19	36562499	36562553	(22055063)	+	MLT1A1	LTR/ERVL-MaLR	21	86	(322)	1862791
2395	7.0	2.0	0.7	chr19	36562554	36562853	(22054763)	+	AluY	SINE/Alu	1	304	(7)	1862794
985	19.0	7.1	11.5	chr19	36602346	36602564	(22015052)	C	MER58B	DNA/hAT-Charlie	(130)	211	1	1862870
2403	8.2	0.3	0.7	chr19	36602647	36602950	(22014666)	+	AluSp	SINE/Alu	1	303	(10)	1862873
18	19.3	2.3	2.3	chr19	36605646	36605688	(22011928)	+	(CG)n	Simple_repeat	1	44	(0)	1862877
2254	8.6	0.4	0.0	chr19	36721733	36722040	(21895576)	C	AluSg	SINE/Alu	(0)	310	2	1863106
1659	15.3	11.6	22.1	chr19	36771094	36771715	(21845901)	C	LTR25	LTR/ERV1	(64)	780	356	1863212
4287	15.4	10.1	1.9	chr19	36799599	36800393	(21817223)	+	LTR5B	LTR/ERVK	1	868	(134)	1863283
2518	8.7	0.0	0.0	chr19	36800401	36800710	(21816906)	C	AluSg	SINE/Alu	(0)	310	1	1863284
1085	31.9	9.0	4.7	chr19	36837059	36837697	(21779919)	+	L2	LINE/L2	185	853	(2566)	1863351
397	31.3	5.0	1.4	chr19	36837749	36837962	(21779654)	+	L2	LINE/L2	1826	2047	(1372)	1863351
1896	12.9	0.4	0.0	chr19	36888802	36889056	(21728560)	C	AluSx1	SINE/Alu	(41)	271	16	1863466
6786	17.9	3.0	0.4	chr19	36889065	36890559	(21727057)	C	L1P4	LINE/L1	(2262)	3884	2350	1863467
1269	29.8	7.2	5.2	chr19	36909837	36910008	(21707608)	+	HAL1	LINE/L1	2179	2375	(132)	1863497
2539	7.1	0.0	0.0	chr19	36910088	36910384	(21707232)	C	AluSq	SINE/Alu	(16)	297	1	1863499
759	29.3	11.8	3.4	chr19	37037368	37037717	(21579899)	+	LTR16E1	LTR/ERVL	16	398	(140)	1863745
949	24.6	3.8	0.7	chr19	37217404	37217682	(21399934)	C	L1MB7	LINE/L1	(0)	6184	5897	1864045
3554	13.2	6.8	0.9	chr19	37252394	37252974	(21364642)	C	LTR5B	LTR/ERVK	(0)	1002	385	1864122
341	30.3	6.4	3.5	chr19	37254113	37254338	(21363278)	+	Charlie4a	DNA/hAT-Charlie	79	311	(197)	1864126
821	21.3	1.7	0.6	chr19	37262293	37262462	(21355154)	+	MER5A	DNA/hAT-Charlie	10	181	(8)	1864140
12407	2.4	0.1	2.0	chr19	37268624	37270188	(21347428)	C	SST1	Satellite/centr	(28)	1535	1	1864148
11453	1.9	0.0	2.1	chr19	37281251	37282846	(21334770)	C	SST1	Satellite/centr	(0)	1563	1	1864166
11481	2.0	0.0	2.1	chr19	37286300	37287895	(21329721)	C	SST1	Satellite/centr	(0)	1563	1	1864174
11512	1.7	0.0	2.1	chr19	37288824	37290419	(21327197)	C	SST1	Satellite/centr	(0)	1563	1	1864177
11497	1.7	0.1	2.1	chr19	37291350	37292944	(21324672)	C	SST1	Satellite/centr	(0)	1563	1	1864181
32	25.9	4.5	3.7	chr19	37293674	37293684	(21323932)	+	(ACAG)n	Simple_repeat	1	25	(139)	1864182
49	16.0	1.1	1.1	chr19	37293685	37293776	(21323840)	+	GA-rich	Low_complexity	1	93	(0)	1864183
32	25.9	4.5	3.7	chr19	37293777	37293830	(21323786)	+	(ACAG)n	Simple_repeat	26	164	(0)	1864182
37	21.9	2.2	1.1	chr19	37293783	37293874	(21323742)	+	(CA)n	Simple_repeat	1	94	(0)	1864184
11497	1.7	0.1	2.1	chr19	37296401	37297995	(21319621)	C	SST1	Satellite/centr	(0)	1563	1	1864189
11489	1.9	0.0	2.1	chr19	37301466	37303061	(21314555)	C	SST1	Satellite/centr	(0)	1563	1	1864196
2827	24.4	6.6	4.3	chr19	37341937	37342409	(21275207)	C	MLT1H2-int	LTR/ERVL-MaLR	(595)	814	294	1864270
11	20.5	5.1	0.0	chr19	37371221	37371259	(21246357)	+	G-rich	Low_complexity	1	41	(0)	1864324
20	12.0	8.8	2.7	chr19	37501688	37501744	(21115872)	+	A-rich	Low_complexity	1	61	(0)	1864553
6111	13.4	3.3	0.5	chr19	37501745	37502718	(21114898)	C	LTR5B	LTR/ERVK	(0)	1002	1	1864554
34	30.9	3.5	4.5	chr19	38335927	38336107	(20281509)	+	G-rich	Low_complexity	1	179	(0)	1866434
15	4.7	0.0	0.0	chr19	38338873	38338894	(20278722)	+	(TTAA)n	Simple_repeat	1	22	(0)	1866441
3707	7.0	4.9	2.8	chr19	38338918	38339494	(20278122)	C	LTR14B	LTR/ERVK	(0)	608	19	1866442
261	30.9	9.6	0.0	chr19	38366152	38366274	(20251342)	C	MIRc	SINE/MIR	(116)	152	17	1866507
307	29.1	16.4	0.9	chr19	38366397	38366618	(20250998)	C	L2b	LINE/L2	(417)	3002	2740	1866499
2251	7.3	0.7	1.3	chr19	38832884	38833185	(19784431)	+	AluY	SINE/Alu	1	300	(11)	1867548
284	27.9	1.1	2.3	chr19	38996346	38996433	(19621183)	C	MLT1L	LTR/ERVL-MaLR	(331)	181	71	1867953
1975	13.2	0.0	3.6	chr19	39187197	39187310	(19430306)	C	AluJb	SINE/Alu	(177)	135	22	1868478
12	21.0	5.9	1.9	chr19	39187316	39187366	(19430250)	+	(TCTCTG)n	Simple_repeat	1	54	(0)	1868480
2177	15.3	2.6	2.3	chr19	39291377	39291763	(19325853)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	45	1868765
1944	7.9	8.0	0.4	chr19	39291765	39292042	(19325574)	C	AluSx	SINE/Alu	(11)	301	1	1868766
619	12.7	1.0	2.1	chr19	39403058	39403506	(19214110)	C	MSR1	Satellite	(0)	444	1	1869004
7602	5.9	1.9	3.1	chr19	39479462	39480441	(19137175)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	1869167
187	37.0	0.0	1.4	chr19	40219654	40219727	(18397889)	C	L2b	LINE/L2	(78)	3297	3225	1870520
453	33.0	4.9	0.9	chr19	40219783	40219999	(18397617)	+	MIR	SINE/MIR	36	261	(1)	1870521
1502	21.5	16.0	1.3	chr19	40229389	40229935	(18387681)	C	L1MC3	LINE/L1	(67)	7718	7076	1870542
184	29.2	0.0	0.0	chr19	40277822	40277869	(18339747)	+	L2a	LINE/L2	3365	3412	(14)	1870637
25	19.6	1.5	2.9	chr19	40348828	40348895	(18268721)	+	(TATAATA)n	Simple_repeat	1	69	(0)	1870837
364	36.3	8.5	1.6	chr19	40356111	40356362	(18261254)	C	L2b	LINE/L2	(339)	3080	2810	1870859
213	32.4	2.8	1.9	chr19	40433754	40433860	(18183756)	C	L2a	LINE/L2	(198)	3177	3070	1871042
15	14.7	0.0	0.0	chr19	40433948	40433977	(18183639)	+	(GGGA)n	Simple_repeat	1	30	(0)	1871050
552	18.9	15.4	0.0	chr19	40465100	40465231	(18152385)	+	MIR	SINE/MIR	12	167	(95)	1871150
227	21.7	0.0	0.0	chr19	40646353	40646398	(17971218)	C	MLT1K	LTR/ERVL-MaLR	(19)	523	478	1871603
956	7.4	0.0	0.0	chr19	40646400	40646521	(17971095)	+	AluSx3	SINE/Alu	185	306	(5)	1871604
429	29.0	7.7	4.4	chr19	40875237	40875463	(17742153)	+	MIRb	SINE/MIR	34	268	(0)	1872144
4491	9.5	1.0	0.0	chr19	40954173	40954753	(17662863)	+	LTR14C	LTR/ERVK	1	587	(0)	1872319
20069	7.1	1.3	0.1	chr19	40954754	40957267	(17660349)	+	HERVK14C-int	LTR/ERVK	1	2544	(4890)	1872319
200	31.1	10.4	1.0	chr19	42018873	42018976	(16598640)	+	L2c	LINE/L2	3273	3387	(0)	1874386
612	23.1	11.8	1.1	chr19	42378108	42378387	(16239229)	C	LTR33A_	LTR/ERVL	(4)	527	214	1875149
14	24.2	2.3	0.0	chr19	43533433	43533476	(15084140)	+	(GGCAGC)n	Simple_repeat	1	45	(0)	1877038
314	24.8	16.9	0.0	chr19	43670360	43670472	(14947144)	+	MIR	SINE/MIR	17	152	(110)	1877380
287	21.4	13.2	0.0	chr19	43670480	43670591	(14947025)	+	L1MC5a	LINE/L1	2446	2574	(203)	1877381
950	30.0	6.7	0.8	chr19	43691838	43692190	(14925426)	+	L1MEd	LINE/L1	561	935	(6151)	1877446
3024	12.3	1.8	0.0	chr19	43857537	43857967	(14759649)	+	MER1A	DNA/hAT-Charlie	1	439	(90)	1877831
828	23.1	5.3	0.1	chr19	43903649	43903860	(14713756)	+	L1MDa	LINE/L1	823	1004	(5629)	1877890
1982	14.0	2.2	4.0	chr19	43903861	43904233	(14713383)	+	MLT1B	LTR/ERVL-MaLR	1	366	(24)	1877891
11674	12.0	1.6	0.4	chr19	43946602	43949374	(14668242)	C	L1PA13	LINE/L1	(2936)	3830	1043	1877965
5842	17.3	0.7	4.2	chr19	43959836	43960999	(14656617)	+	MSTB-int	LTR/ERVL-MaLR	1	1123	(528)	1877984
2470	7.5	0.3	0.3	chr19	44110606	44110913	(14506703)	C	AluSg4	SINE/Alu	(2)	308	1	1878219
1939	26.5	7.1	2.8	chr19	44110914	44111136	(14506480)	+	ERVL-B4-int	LTR/ERVL	3311	3553	(2161)	1878218
1043	18.4	15.1	13.5	chr19	44161722	44161879	(14455737)	+	MER1B	DNA/hAT-Charlie	1	199	(140)	1878301
2148	10.9	0.0	0.0	chr19	44161880	44162155	(14455461)	+	AluSq2	SINE/Alu	2	277	(36)	1878302
2394	5.9	1.0	0.0	chr19	44501074	44501363	(14116253)	C	AluSq2	SINE/Alu	(2)	311	19	1878831
1108	29.7	4.3	6.2	chr19	44501364	44501849	(14115767)	+	L2a	LINE/L2	2952	3425	(1)	1878830
745	27.4	2.1	8.4	chr19	44714597	44714847	(13902769)	C	MLT1J	LTR/ERVL-MaLR	(52)	460	226	1879413
640	29.6	1.4	1.4	chr19	44714893	44715108	(13902508)	C	MLT1J	LTR/ERVL-MaLR	(295)	217	2	1879413
1558	22.5	3.8	8.3	chr19	46030406	46030861	(12586755)	+	L1MD2	LINE/L1	5922	6359	(0)	1882868
3254	14.0	1.1	5.9	chr19	46030892	46031467	(12586149)	+	LTR14	LTR/ERVK	1	548	(0)	1882870
445	23.5	0.0	1.0	chr19	46402441	46402539	(12215077)	+	MLT1H	LTR/ERVL-MaLR	57	154	(395)	1883568
276	27.6	7.0	4.6	chr19	46413580	46413731	(12203885)	C	LTR104_Mam	LTR/Gypsy	(698)	811	656	1883596
15	18.6	2.1	4.2	chr19	46416659	46416705	(12200911)	+	(GGCGGA)n	Simple_repeat	1	48	(0)	1883605
300	32.9	10.0	3.7	chr19	47008491	47008705	(11608911)	+	L2b	LINE/L2	2941	3170	(205)	1885048
30	29.3	0.8	5.3	chr19	47242925	47243056	(11374560)	+	(TG)n	Simple_repeat	1	133	(0)	1885631
798	27.2	4.1	0.9	chr19	47277663	47277765	(11339851)	+	MIR	SINE/MIR	116	223	(39)	1885717
1742	13.6	9.9	0.0	chr19	47907895	47908166	(10709450)	C	AluSx1	SINE/Alu	(10)	302	1	1887384
1338	24.2	7.3	4.7	chr19	48524128	48524487	(10093129)	+	MLT1G1	LTR/ERVL-MaLR	3	372	(207)	1888949
753	27.6	2.8	4.6	chr19	48524487	48524868	(10092748)	+	MLT1G1	LTR/ERVL-MaLR	247	589	(6)	1888950
2395	8.7	0.0	0.0	chr19	48601483	48601781	(10015835)	+	AluSx1	SINE/Alu	1	299	(13)	1889189
564	25.2	7.6	0.0	chr19	48675609	48675767	(9941849)	C	MER45A	DNA/hAT-Tip100	(4)	174	3	1889343
2164	14.9	8.7	6.7	chr19	49190846	49191195	(9426421)	C	MSTB	LTR/ERVL-MaLR	(0)	426	55	1890561
2059	14.5	0.7	0.7	chr19	49191196	49191505	(9426111)	C	AluSz	SINE/Alu	(2)	310	1	1890562
1119	13.1	0.0	0.0	chr19	49431962	49432121	(9185495)	C	AluJr	SINE/Alu	(16)	296	137	1891088
2221	12.0	0.0	0.3	chr19	49452714	49453021	(9164595)	C	AluSx	SINE/Alu	(5)	307	1	1891124
3323	11.1	5.3	6.1	chr19	49723099	49723692	(8893924)	+	LTR14B	LTR/ERVK	19	605	(3)	1891778
447	5.7	0.0	0.0	chr19	49723693	49723745	(8893871)	+	AluSx	SINE/Alu	84	136	(176)	1891779
548	28.7	10.0	4.8	chr19	50031474	50031803	(8585813)	+	L2c	LINE/L2	3039	3387	(0)	1892463
519	35.3	4.2	1.4	chr19	50031827	50032105	(8585511)	+	L2b	LINE/L2	3077	3363	(12)	1892464
387	24.9	11.5	4.5	chr19	50092779	50092980	(8524636)	C	L2a	LINE/L2	(151)	3275	3058	1892610
362	25.6	11.0	5.1	chr19	50098116	50098329	(8519287)	C	L2a	LINE/L2	(151)	3275	3048	1892626
2436	8.7	0.0	0.0	chr19	50098333	50098632	(8518984)	+	AluSg	SINE/Alu	6	305	(5)	1892627
362	25.6	11.0	5.1	chr19	50101181	50101394	(8516222)	C	L2a	LINE/L2	(151)	3275	3048	1892637
387	24.9	11.5	4.5	chr19	50107304	50107505	(8510111)	C	L2a	LINE/L2	(151)	3275	3058	1892657
387	24.9	11.5	4.5	chr19	50123364	50123565	(8494051)	C	L2a	LINE/L2	(151)	3275	3058	1892705
13	6.7	5.7	5.4	chr19	50723360	50723394	(7894222)	+	GA-rich	Low_complexity	1	37	(0)	1894167
2456	6.4	0.0	0.3	chr19	51071598	51071893	(7545723)	C	AluSc8	SINE/Alu	(16)	295	1	1894959
270	27.9	1.4	0.0	chr19	51072032	51072099	(7545517)	+	L1M5	LINE/L1	5731	5799	(395)	1894954
481	26.1	7.8	2.5	chr19	51072100	51072256	(7545360)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	1894960
1703	11.7	0.0	0.8	chr19	51397104	51397350	(7220266)	C	AluSx1	SINE/Alu	(9)	303	59	1895545
3801	10.6	1.4	4.7	chr19	51397351	51397964	(7219652)	C	LTR14B	LTR/ERVK	(13)	595	3	1895546
290	26.2	3.6	0.0	chr19	51480732	51480811	(7136805)	C	MLT1E1	LTR/ERVL-MaLR	(569)	85	3	1895711
303	32.6	6.7	1.6	chr19	51480840	51481023	(7136593)	+	MIRb	SINE/MIR	20	213	(55)	1895712
15477	10.8	2.6	0.3	chr19	51976454	51978688	(6638928)	+	HERVK3-int	LTR/ERVK	1	2288	(4914)	1896586
16531	11.5	0.6	0.3	chr19	51978687	51981020	(6636596)	+	HERVK3-int	LTR/ERVK	4863	7202	(0)	1896586
2054	14.5	0.0	0.3	chr19	52135847	52136142	(6481474)	+	AluSz6	SINE/Alu	1	295	(17)	1896845
3358	17.6	2.2	11.7	chr19	52136159	52136199	(6481417)	+	L1MA9	LINE/L1	5324	5360	(952)	1896846
1775	10.4	11.3	0.4	chr19	52136200	52136458	(6481158)	+	AluSq2	SINE/Alu	2	292	(21)	1896847
12	19.6	0.0	5.1	chr19	52190438	52190476	(6427140)	+	(GGCTGG)n	Simple_repeat	1	39	(0)	1896965
35219	12.8	1.3	1.2	chr19	52305120	52307502	(6310114)	C	HERVK9-int	LTR/ERVK	(3868)	2153	1	1897211
3823	8.7	0.4	0.0	chr19	52307503	52307999	(6309617)	C	MER9B	LTR/ERVK	(0)	499	1	1897211
1777	18.5	0.0	1.0	chr19	52688177	52688473	(5929143)	C	AluJb	SINE/Alu	(18)	294	1	1897969
13	11.4	0.0	6.2	chr19	52690544	52690575	(5927041)	+	G-rich	Low_complexity	1	32	(0)	1897973
3442	12.6	3.2	5.9	chr19	53443340	53443774	(5173842)	C	LTR14B	LTR/ERVK	(0)	608	186	1899362
2256	11.0	2.8	4.4	chr19	53480827	53481312	(5136304)	C	LTR14B	LTR/ERVK	(2)	606	17	1899429
20	14.4	0.0	2.4	chr19	54665858	54665898	(3951718)	+	(CTC)n	Simple_repeat	1	41	(0)	1902126
655	6.5	1.7	0.0	chr19	55437789	55438177	(3179439)	+	MSR1	Satellite	1	395	(0)	1903737
31	22.5	6.0	1.6	chr19	55466127	55466206	(3151410)	+	(TCTA)n	Simple_repeat	1	84	(0)	1903786
232	22.8	8.9	0.0	chr19	55709408	55709499	(2908117)	C	L1MC5a	LINE/L1	(48)	2729	2629	1904333
347	32.2	17.8	0.0	chr19	55709548	55709820	(2907796)	+	L2a	LINE/L2	1894	2225	(1194)	1904334
462	26.9	10.4	3.2	chr19	56252868	56253117	(2364499)	C	LTR41B	LTR/ERVL	(488)	270	1	1905468
196	34.5	13.0	1.1	chr19	56538018	56538193	(2079423)	C	L2a	LINE/L2	(270)	3156	2957	1905961
506	25.4	0.7	2.7	chr19	56885548	56885693	(1731923)	+	Charlie2a	DNA/hAT-Charlie	180	322	(2539)	1906661
1725	21.3	7.2	1.1	chr19	57063213	57063592	(1554024)	+	MLT2F	LTR/ERVL	189	593	(70)	1907085
31543	14.0	4.2	2.1	chr19	57564659	57567399	(1050217)	C	LTR25-int	LTR/ERV1	(3703)	3485	633	1907989
2442	9.2	0.0	0.0	chr19	57626039	57626342	(991274)	+	AluY	SINE/Alu	1	304	(7)	1908063
2129	20.7	8.9	3.3	chr19	57705774	57706150	(911466)	C	LTR53	LTR/ERVL	(101)	418	1	1908189
3193	12.3	6.6	9.5	chr19	57903856	57904466	(713150)	+	LTR14B	LTR/ERVK	17	608	(0)	1908520
3085	17.9	4.8	6.9	chr19	57915507	57916213	(701403)	+	LTR8	LTR/ERV1	1	691	(0)	1908539
854	17.1	0.0	0.0	chr19	58304156	58304284	(313332)	C	FLAM_C	SINE/Alu	(14)	129	1	1909306
1064	27.5	1.4	2.1	chr2	109138	109419	(242084110)	C	L1MA4A	LINE/L1	(6362)	487	208	1910917
1121	24.4	11.0	2.7	chr2	368638	368972	(241824557)	C	MLT1A1	LTR/ERVL-MaLR	(12)	396	29	1911187
8496	18.2	3.9	4.5	chr2	368975	369689	(241823840)	C	L1M3	LINE/L1	(841)	5299	4551	1911188
438	28.9	13.6	2.0	chr2	3146404	3146604	(239046925)	+	MIR	SINE/MIR	35	262	(0)	1914128
1099	28.1	8.0	2.0	chr2	5637484	5638090	(236555439)	+	Charlie7	DNA/hAT-Charlie	44	690	(1922)	1917376
32544	20.9	1.9	1.6	chr2	6838364	6846789	(235346740)	C	HUERS-P3-int	LTR/ERV1	(224)	8695	262	1919104
273	24.5	8.9	1.0	chr2	9857075	9857177	(232336352)	C	L2a	LINE/L2	(236)	3190	3079	1923791
458	17.5	2.8	5.5	chr2	9857180	9857288	(232336241)	+	MER5A1	DNA/hAT-Charlie	61	166	(0)	1923792
359	19.1	6.8	0.8	chr2	10282808	10282929	(231910600)	C	LTR16D1	LTR/ERVL	(27)	648	482	1924510
536	27.3	1.8	0.6	chr2	10301387	10301552	(231891977)	+	MLT1J1	LTR/ERVL-MaLR	1	168	(276)	1924543
441	33.9	6.3	1.2	chr2	10375559	10375800	(231817729)	+	MIR	SINE/MIR	2	256	(6)	1924660
682	31.6	3.1	1.9	chr2	10452193	10452515	(231741014)	+	MARNA	DNA/TcMar-Mariner	231	557	(29)	1924780
2112	11.2	0.0	1.3	chr2	10452695	10452997	(231740532)	C	AluSz6	SINE/Alu	(13)	299	1	1924781
187	38.2	3.5	2.6	chr2	10865851	10865963	(231327566)	+	L3	LINE/CR1	3631	3744	(355)	1925627
2348	20.5	6.5	0.0	chr2	11128164	11128656	(231064873)	+	MER68	LTR/ERVL	36	562	(1)	1926071
569	29.2	11.0	1.2	chr2	11128695	11128947	(231064582)	+	L1ME4c	LINE/L1	269	549	(281)	1926072
720	17.6	4.2	5.9	chr2	15287404	15287572	(226905957)	+	MER20	DNA/hAT-Charlie	1	166	(53)	1932479
277	23.9	0.0	6.6	chr2	15748411	15748486	(226445043)	C	MIR3	SINE/MIR	(100)	108	38	1933237
421	23.3	5.2	2.9	chr2	16394557	16395617	(225797912)	+	(CA)n	Simple_repeat	1	1117	(0)	1934452
582	30.6	5.8	3.9	chr2	18741411	18741665	(223451864)	+	MIR	SINE/MIR	9	268	(0)	1937872
9284	16.4	0.8	1.7	chr2	19150003	19151640	(223041889)	C	MSTA-int	LTR/ERVL-MaLR	(8)	1623	1	1938454
14	9.0	4.9	7.0	chr2	20134233	20134273	(222059256)	+	GA-rich	Low_complexity	1	43	(0)	1939819
263	29.2	10.4	0.7	chr2	20217522	20217659	(221975870)	C	MIRc	SINE/MIR	(115)	153	1	1939949
2073	20.4	15.5	5.3	chr2	20275166	20275963	(221917566)	+	L1MC5a	LINE/L1	1562	2456	(321)	1940057
13	4.3	0.0	7.1	chr2	20406921	20406948	(221786581)	+	(CTTTT)n	Simple_repeat	1	28	(0)	1940318
28	5.9	0.0	0.0	chr2	20406949	20406984	(221786545)	+	(CCTT)n	Simple_repeat	1	36	(0)	1940319
742	22.1	0.8	0.0	chr2	20406986	20407116	(221786413)	C	FLAM_A	SINE/Alu	(10)	132	1	1940320
4169	8.6	4.8	0.3	chr2	22550878	22551458	(219642071)	+	LTR14B	LTR/ERVK	1	608	(0)	1943206
1661	18.2	7.0	9.1	chr2	24543028	24543480	(217650049)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	15	1946341
324	28.5	15.8	5.3	chr2	25141830	25142018	(217051511)	+	L1ME4a	LINE/L1	5741	5947	(177)	1947380
1199	25.2	5.0	1.7	chr2	25548481	25548872	(216644657)	C	L2a	LINE/L2	(303)	3123	2716	1948119
2745	21.8	9.6	2.0	chr2	25832618	25833316	(216360213)	+	L1MD2	LINE/L1	5966	6723	(27)	1948646
2447	9.3	0.0	0.6	chr2	26006233	26006545	(216186984)	C	AluSq2	SINE/Alu	(2)	311	1	1949108
539	26.6	15.6	1.3	chr2	26006547	26006771	(216186758)	C	MLT1K	LTR/ERVL-MaLR	(322)	273	11	1949106
922	29.6	9.9	5.4	chr2	26649816	26650841	(215542688)	C	L2b	LINE/L2	(0)	3375	2279	1950312
1832	13.7	4.9	2.0	chr2	27064289	27064587	(215128942)	C	AluJb	SINE/Alu	(3)	309	2	1951120
294	33.0	2.9	0.0	chr2	27351675	27351774	(214841755)	C	LTR67B	LTR/ERVL	(460)	160	58	1951645
216	32.3	16.8	1.5	chr2	27351926	27352267	(214841262)	+	L2	LINE/L2	879	1283	(2136)	1951646
3078	11.0	4.5	0.2	chr2	28949416	28949878	(213243651)	C	MER1A	DNA/hAT-Charlie	(9)	520	37	1954540
296	30.1	6.2	10.9	chr2	30449999	30450218	(211743311)	C	L2c	LINE/L2	(0)	3387	3179	1957036
1964	18.4	4.8	2.4	chr2	30502371	30502821	(211690708)	C	L1MB8	LINE/L1	(16)	6162	5701	1957144
15	5.6	0.0	0.0	chr2	30798920	30798938	(211394591)	+	(TG)n	Simple_repeat	1	19	(0)	1957562
2576	13.8	3.3	0.2	chr2	32034220	32034632	(210158897)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1959358
1143	27.1	7.1	4.7	chr2	32034633	32034715	(210158814)	+	L1MEc	LINE/L1	955	1052	(5817)	1959357
12	21.7	0.0	0.0	chr2	32039562	32039593	(210153936)	+	(CCCCGA)n	Simple_repeat	1	32	(0)	1959375
22	23.4	1.6	1.6	chr2	32357248	32357347	(209836182)	+	(GGC)n	Simple_repeat	1	100	(0)	1960156
240	33.9	3.2	3.2	chr2	33313762	33313886	(208879643)	C	L2c	LINE/L2	(13)	3374	3250	1961766
1923	16.6	2.1	4.3	chr2	33495194	33495540	(208697989)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	1962058
3998	22.9	8.6	3.5	chr2	35033748	35035285	(207158244)	C	MER52A	LTR/ERV1	(0)	1755	1	1964330
198	31.0	6.0	6.3	chr2	36445320	36445605	(205747924)	+	L2c	LINE/L2	3044	3328	(59)	1966065
3018	19.2	15.4	4.6	chr2	38739320	38740026	(203453503)	+	L1M4a2	LINE/L1	1344	2140	(516)	1969867
4121	6.4	6.9	3.4	chr2	41209969	41210554	(200982975)	+	LTR14B	LTR/ERVK	1	608	(0)	1973665
990	13.7	4.8	5.2	chr2	41210555	41210586	(200982943)	C	L1MA6	LINE/L1	(941)	5202	5171	1973664
398	29.5	4.5	3.2	chr2	41909647	41909800	(200283729)	C	LTR78	LTR/ERV1	(181)	1123	968	1974627
377	27.4	11.7	2.8	chr2	41909849	41910066	(200283463)	C	LTR78	LTR/ERV1	(1057)	247	8	1974627
1307	19.9	3.3	0.4	chr2	42358007	42358269	(199835260)	C	L1M4	LINE/L1	(544)	5640	5370	1975387
1289	26.5	10.9	2.8	chr2	43020122	43020590	(199172939)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	1	1976725
15	21.3	0.0	2.5	chr2	43160068	43160107	(199033422)	+	(CCT)n	Simple_repeat	1	40	(0)	1977003
704	15.3	0.0	0.0	chr2	46492276	46492386	(195701143)	C	AluJb	SINE/Alu	(0)	312	202	1982341
202	22.9	2.0	0.0	chr2	46720679	46720726	(195472803)	C	MIR3	SINE/MIR	(48)	160	112	1982695
333	32.7	1.7	0.0	chr2	46835823	46835935	(195357594)	+	MIRb	SINE/MIR	124	238	(30)	1982900
230	20.8	2.0	0.0	chr2	46836046	46836107	(195357422)	C	MIRb	SINE/MIR	(101)	167	105	1982901
18	7.5	0.0	0.0	chr2	47186656	47186683	(195006846)	+	(TGC)n	Simple_repeat	1	28	(0)	1983501
37663	16.4	2.0	3.6	chr2	47583174	47591063	(194602466)	C	HERVH-int	LTR/ERV1	(0)	7713	1	1984363
2363	20.0	14.9	0.9	chr2	48047216	48047467	(194146062)	+	MLT2F	LTR/ERVL	5	316	(347)	1985287
54	3.7	0.0	0.0	chr2	48047468	48047522	(194146007)	+	(GT)n	Simple_repeat	1	55	(0)	1985290
14	22.5	0.0	0.0	chr2	48860490	48860525	(193333004)	+	(GAAT)n	Simple_repeat	1	36	(0)	1986643
21694	8.3	0.6	0.2	chr2	53663033	53667679	(188525850)	+	L1PA7	LINE/L1	1511	6153	(1)	1992939
5110	16.5	4.8	1.5	chr2	53708469	53709414	(188484115)	+	MSTA-int	LTR/ERVL-MaLR	1	979	(672)	1993003
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
865	29.4	6.6	6.6	chr2	55482193	55482632	(186710897)	C	MLT1K	LTR/ERVL-MaLR	(10)	585	146	1995982
342	29.9	10.1	4.4	chr2	64831714	64831919	(177361610)	C	LFSINE_Vert	SINE/tRNA	(166)	293	75	2010021
17320	14.2	0.3	1.4	chr2	64888438	64891023	(177302506)	C	HERVE-int	LTR/ERV1	(2717)	5096	2541	2010142
627	25.0	9.2	1.8	chr2	65325397	65325567	(176867962)	+	MIR3	SINE/MIR	12	196	(12)	2011062
252	31.2	19.3	2.7	chr2	65465771	65466136	(176727393)	C	L2b	LINE/L2	(22)	3353	2913	2011307
233	26.2	7.0	10.1	chr2	65466158	65466218	(176727311)	C	MER5B	DNA/hAT-Charlie	(62)	116	63	2011308
2250	9.9	0.3	3.5	chr2	65466219	65466532	(176726997)	C	AluSx	SINE/Alu	(8)	304	1	2011309
1192	16.2	0.0	0.0	chr2	66085182	66085379	(176108150)	+	L1PB1	LINE/L1	3	200	(6663)	2012349
531	14.5	11.7	0.7	chr2	66085412	66085538	(176107991)	+	L1PB1	LINE/L1	647	773	(6090)	2012349
2707	12.2	3.4	2.6	chr2	66085547	66086008	(176107521)	+	L1PB1	LINE/L1	723	1188	(5675)	2012349
839	17.6	2.1	1.4	chr2	67451913	67452054	(174741475)	C	FRAM	SINE/Alu	(33)	143	1	2014110
948	30.7	5.4	0.9	chr2	67452144	67452478	(174741051)	+	L2	LINE/L2	1817	2167	(1252)	2014111
626	33.0	4.8	8.4	chr2	67832718	67833176	(174360353)	C	MLT1O	LTR/ERVL-MaLR	(0)	542	111	2014609
1148	30.4	7.9	9.4	chr2	67893304	67894115	(174299414)	C	LTR81B	LTR/Gypsy	(18)	1375	585	2014712
32	3.2	0.0	0.0	chr2	67894116	67894147	(174299382)	+	(CA)n	Simple_repeat	1	32	(0)	2014713
1148	30.4	7.9	9.4	chr2	67894148	67894447	(174299082)	C	LTR81B	LTR/Gypsy	(809)	584	282	2014712
2753	13.4	6.8	7.0	chr2	70405043	70405571	(171787958)	+	LTR14B	LTR/ERVK	17	544	(64)	2019047
41	0.0	0.0	0.0	chr2	72451655	72451689	(169741840)	+	(TG)n	Simple_repeat	1	35	(0)	2022044
6222	18.6	4.5	1.4	chr2	73639095	73639850	(168553679)	+	MSTB-int	LTR/ERVL-MaLR	885	1650	(1)	2023977
184	28.6	14.4	0.8	chr2	73737577	73737696	(168455833)	+	MIR3	SINE/MIR	30	168	(40)	2024107
9534	9.1	10.5	0.1	chr2	77590309	77591721	(164601808)	+	LTR12C	LTR/ERV1	3	1579	(0)	2029864
2467	5.8	2.0	0.0	chr2	79597193	79597485	(162596044)	+	AluY	SINE/Alu	3	301	(10)	2032514
6256	13.9	2.0	2.4	chr2	79597612	79599288	(162594241)	C	L1MC1	LINE/L1	(0)	6333	4666	2032515
3789	10.5	0.8	0.0	chr2	84470246	84470759	(157722770)	C	MER41A	LTR/ERV1	(0)	554	37	2039033
2216	7.7	9.6	4.4	chr2	84470760	84471171	(157722358)	C	LTR14B	LTR/ERVK	(0)	608	1	2039034
42370	5.8	2.0	0.2	chr2	84471381	84477034	(157716495)	C	HERVK14-int	LTR/ERVK	(195)	5901	1	2039036
1919	8.6	10.7	4.8	chr2	84477047	84477426	(157716103)	C	LTR14B	LTR/ERVK	(30)	578	1	2039036
222	26.1	10.7	1.1	chr2	84479479	84479571	(157713958)	C	UCON132b	DNA/hAT-Tip100	(45)	103	1	2039039
184	22.2	0.0	2.2	chr2	85148468	85148513	(157045016)	+	MIR1_Amn	SINE/MIR	116	160	(70)	2040210
1804	24.7	6.7	12.0	chr2	85913712	85913787	(156279742)	+	MER21C	LTR/ERVL	752	825	(113)	2041728
289	18.5	23.4	7.4	chr2	85913963	85914125	(156279404)	C	LTR88b	LTR/Gypsy?	(0)	837	641	2041731
299	32.1	7.5	1.2	chr2	88201054	88201214	(153992315)	C	LTR16A	LTR/ERVL	(248)	203	32	2045468
2821	13.3	4.9	0.0	chr2	88541035	88541462	(153652067)	C	MSTB2	LTR/ERVL-MaLR	(5)	452	3	2046246
820	13.2	0.8	2.9	chr2	88541484	88541619	(153651910)	+	AluJo	SINE/Alu	1	133	(179)	2046247
1219	25.8	8.4	4.5	chr2	89224959	89225177	(152968352)	C	LTR55	LTR/ERVL?	(11)	537	301	2047134
4564	7.9	3.8	0.5	chr2	89225178	89225762	(152967767)	C	LTR14B	LTR/ERVK	(0)	608	4	2047135
29	5.4	0.0	8.7	chr2	89786705	89786773	(152406756)	+	(GATTCCATTC)n	Simple_repeat	1	69	(0)	2047587
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
4197	8.6	3.8	0.5	chr2	89956687	89957271	(152236258)	+	LTR14B	LTR/ERVK	4	608	(0)	2047766
1038	26.1	8.6	4.3	chr2	89957272	89957488	(152236041)	+	LTR55	LTR/ERVL?	294	537	(11)	2047765
344	30.7	7.0	1.0	chr2	95327080	95327327	(146866202)	C	ERVL-B4-int	LTR/ERVL	(3958)	1696	1423	2050514
46	23.8	0.9	0.0	chr2	95327362	95327475	(146866054)	+	(CACACA)n	Simple_repeat	1	115	(0)	2050515
4551	8.3	0.0	0.0	chr2	97964921	97965507	(144228022)	+	LTR14C	LTR/ERVK	1	587	(0)	2054333
2197	14.5	2.4	5.1	chr2	98466919	98467347	(143726182)	C	MSTB1	LTR/ERVL-MaLR	(2)	430	14	2055055
12	18.3	4.3	4.1	chr2	98730510	98730556	(143462973)	+	(GCCCCT)n	Simple_repeat	1	49	(0)	2055398
202	36.1	4.0	1.0	chr2	100389218	100389315	(141804214)	+	MIR	SINE/MIR	3	103	(159)	2057812
2172	13.9	0.0	0.0	chr2	100389380	100389689	(141803840)	+	AluSx	SINE/Alu	1	310	(2)	2057813
56	0.0	0.0	0.0	chr2	100621150	100621197	(141572332)	+	(CA)n	Simple_repeat	1	48	(0)	2058236
16	5.2	0.0	0.0	chr2	100621203	100621222	(141572307)	+	(TC)n	Simple_repeat	1	20	(0)	2058237
12082	8.8	0.4	0.1	chr2	101169758	101171333	(141022196)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2059101
442	16.7	0.0	0.0	chr2	102034010	102034075	(140159454)	C	LTR79	LTR/ERVL	(133)	394	329	2060540
2501	10.3	3.4	4.1	chr2	102373768	102374182	(139819347)	+	MER1A	DNA/hAT-Charlie	118	529	(0)	2060999
4382	9.0	3.3	3.1	chr2	102801239	102801912	(139391617)	C	LTR76	LTR/ERV1	(0)	675	1	2061561
5706	25.1	5.3	5.2	chr2	105131314	105131658	(137061871)	C	ERV3-16A3_I-int	LTR/ERVL	(2881)	2345	1986	2064442
4709	18.9	1.4	1.3	chr2	105131682	105132557	(137060972)	+	L1MB4	LINE/L1	4158	5045	(1101)	2064445
3857	9.3	0.8	1.5	chr2	105650823	105651355	(136542174)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2065289
3849	10.7	1.7	5.1	chr2	105989643	105990255	(136203274)	+	LTR14B	LTR/ERVK	17	608	(0)	2065757
9170	9.1	0.1	0.2	chr2	105990256	105991451	(136202078)	+	HERVK14-int	LTR/ERVK	1	1195	(4901)	2065757
3914	11.8	1.1	4.9	chr2	105994179	105994810	(136198719)	+	LTR14B	LTR/ERVK	1	608	(0)	2065759
1084	26.8	9.6	6.3	chr2	105994813	105995254	(136198275)	+	MER21C	LTR/ERVL	374	831	(107)	2065756
2081	11.3	1.0	4.2	chr2	106241473	106241618	(135951911)	+	AluSc	SINE/Alu	1	144	(165)	2066071
4086	10.5	1.3	4.9	chr2	106241619	106242247	(135951282)	C	LTR14B	LTR/ERVK	(0)	608	3	2066072
3167	12.4	0.9	1.3	chr2	106558106	106558561	(135634968)	+	MER1A	DNA/hAT-Charlie	37	490	(39)	2066677
2166	11.2	0.0	4.2	chr2	107909022	107909167	(134284362)	+	AluSc	SINE/Alu	1	144	(165)	2068563
3934	11.4	1.3	4.9	chr2	107909168	107909796	(134283733)	C	LTR14B	LTR/ERVK	(0)	608	3	2068564
330	36.2	5.9	6.8	chr2	107941780	107942173	(134251356)	+	L2c	LINE/L2	2998	3387	(0)	2068605
1317	23.2	8.8	2.8	chr2	108835779	108836141	(133357388)	C	MSTD	LTR/ERVL-MaLR	(8)	388	2	2069888
2487	16.6	2.6	0.7	chr2	108836143	108836592	(133356937)	C	L1MB2	LINE/L1	(147)	6024	5566	2069887
1854	15.9	0.6	3.4	chr2	108842018	108842337	(133351192)	C	AluJr	SINE/Alu	(0)	312	2	2069897
1972	23.2	5.9	2.9	chr2	108842338	108842843	(133350686)	C	MER54A	LTR/ERVL	(172)	472	1	2069898
4542	6.5	4.0	0.3	chr2	109972433	109973018	(132220511)	C	LTR14B	LTR/ERVK	(0)	608	1	2071606
4493	6.3	4.0	0.3	chr2	110270396	110270981	(131922548)	C	LTR14B	LTR/ERVK	(0)	608	1	2071972
4515	6.2	4.0	0.3	chr2	110398473	110399058	(131794471)	+	LTR14B	LTR/ERVK	1	608	(0)	2072115
1579	18.5	10.6	0.6	chr2	110752752	110752959	(131440570)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	318	2072662
2387	15.7	4.5	3.3	chr2	110752960	110753380	(131440149)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2072663
5056	18.8	1.6	5.0	chr2	110774366	110776439	(131417090)	+	L1MB3	LINE/L1	4172	6168	(15)	2072699
1695	32.2	13.8	1.7	chr2	111181990	111183543	(131009986)	+	L2a	LINE/L2	880	2651	(768)	2073187
460	30.7	4.8	5.4	chr2	112483216	112483511	(129710018)	C	MLT1J	LTR/ERVL-MaLR	(197)	315	22	2075172
546	31.7	11.3	3.4	chr2	113407501	113407991	(128785538)	+	L2a	LINE/L2	2869	3401	(25)	2076738
14	10.1	6.2	0.0	chr2	113889918	113889949	(128303580)	+	G-rich	Low_complexity	1	34	(0)	2077575
17	11.7	0.0	8.9	chr2	113890006	113890050	(128303479)	+	GA-rich	Low_complexity	1	45	(0)	2077576
12	11.9	0.0	6.5	chr2	113890041	113890071	(128303458)	+	G-rich	Low_complexity	1	31	(0)	2077577
20	22.4	1.3	5.3	chr2	118185529	118185603	(124007926)	+	G-rich	Low_complexity	1	76	(0)	2083311
547	27.0	7.5	3.0	chr2	119599644	119599896	(122593633)	+	L2a	LINE/L2	3091	3408	(18)	2085631
236	12.2	7.5	0.0	chr2	119600130	119600178	(122593351)	C	L2a	LINE/L2	(110)	3316	3264	2085632
1264	23.7	14.2	1.8	chr2	119696435	119696885	(122496644)	C	L2a	LINE/L2	(1)	3425	2910	2085781
244	27.1	20.4	0.0	chr2	120262887	120263030	(121930499)	C	MIR3	SINE/MIR	(50)	218	36	2086670
1607	16.2	4.7	0.3	chr2	120263173	120263455	(121930074)	C	AluJb	SINE/Alu	(14)	298	3	2086671
265	29.2	1.4	0.0	chr2	120365506	120365577	(121827952)	+	MIR	SINE/MIR	115	187	(75)	2086839
809	28.4	10.5	2.1	chr2	121047591	121047964	(121145565)	+	MLT1I	LTR/ERVL-MaLR	3	411	(0)	2087957
604	26.5	2.1	2.1	chr2	121291597	121291789	(120901740)	+	L1MD3	LINE/L1	7798	7990	(5)	2088441
74	2.8	0.0	0.0	chr2	121292006	121292077	(120901452)	+	(CT)n	Simple_repeat	1	72	(0)	2088442
15	11.7	0.0	0.0	chr2	127637668	127637695	(114555834)	+	(ACCCC)n	Simple_repeat	1	28	(0)	2097755
21	15.5	5.9	0.0	chr2	127637878	127637928	(114555601)	+	(CTTC)n	Simple_repeat	1	54	(0)	2097756
390	27.7	4.7	3.4	chr2	129154338	129154483	(113039046)	+	MLT1I	LTR/ERVL-MaLR	31	178	(233)	2100118
625	16.8	0.0	0.0	chr2	129154484	129154584	(113038945)	C	AluSx3	SINE/Alu	(6)	305	205	2100119
5359	15.5	3.9	0.6	chr2	129718301	129719647	(112473882)	+	L1MA7	LINE/L1	4786	6181	(110)	2100768
2524	7.6	0.0	0.0	chr2	130240833	130241135	(111952394)	C	AluYj4	SINE/Alu	(8)	303	1	2101553
276	18.9	19.5	0.0	chr2	130241164	130241258	(111952271)	+	L2c	LINE/L2	3264	3381	(6)	2101554
296	30.5	9.0	8.7	chr2	130241296	130241582	(111951947)	C	L3	LINE/CR1	(654)	3445	3158	2101555
1987	13.2	1.6	0.3	chr2	130253318	130253621	(111939908)	C	AluSq2	SINE/Alu	(5)	308	1	2101570
1711	18.9	1.0	2.8	chr2	131668454	131668771	(110524758)	+	AluJb	SINE/Alu	1	312	(0)	2103591
1966	14.4	11.2	14.1	chr2	131668815	131669404	(110524125)	C	LTR4	LTR/ERV1	(0)	596	26	2103592
3896	14.8	4.7	0.4	chr2	133353472	133354151	(108839378)	+	LTR1B0	LTR/ERV1	1	710	(32)	2105823
1445	18.5	9.4	0.4	chr2	133983342	133983622	(108209907)	C	AluJb	SINE/Alu	(3)	309	1	2106746
1080	8.9	3.1	6.5	chr2	133983623	133983723	(108209806)	C	MSTB	LTR/ERVL-MaLR	(57)	369	264	2106745
594	13.5	1.0	1.0	chr2	133983723	133983819	(108209710)	C	MSTB	LTR/ERVL-MaLR	(329)	97	1	2106745
1107	21.1	4.7	18.6	chr2	134660897	134661374	(107532155)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	2107709
1917	13.8	2.4	0.0	chr2	134917500	134917790	(107275739)	C	AluJr	SINE/Alu	(14)	298	1	2108146
6865	16.5	4.7	2.1	chr2	135072211	135074671	(107118858)	C	MER83B-int	LTR/ERV1	(173)	4707	12	2108414
2209	5.3	12.8	0.0	chr2	135565786	135566085	(106627444)	C	LTR14A	LTR/ERVK	(0)	344	1	2109223
1079	28.1	5.5	4.8	chr2	135887946	135888101	(106305428)	C	ERV3-16A3_I-int	LTR/ERVL	(890)	4336	4174	2109802
2121	8.0	1.5	18.1	chr2	135888102	135888515	(106305014)	C	LTR14A	LTR/ERVK	(0)	344	1	2109806
2054	15.3	11.2	0.5	chr2	139217598	139217979	(102975550)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2114539
2016	32.8	7.3	5.1	chr2	142461989	142463752	(99729777)	C	HERV16-int	LTR/ERVL	(3087)	1909	38	2118828
9994	12.4	3.2	1.9	chr2	144253323	144254139	(97939390)	+	THE1C-int	LTR/ERVL-MaLR	1	854	(726)	2121153
2342	11.9	0.0	0.0	chr2	144254140	144254450	(97939079)	+	AluSx1	SINE/Alu	1	311	(1)	2121154
2083	16.7	1.9	8.0	chr2	145273728	145274164	(96919365)	C	MSTB	LTR/ERVL-MaLR	(2)	424	15	2122470
2290	13.1	5.1	0.0	chr2	148259546	148259882	(93933647)	C	LTR18A	LTR/ERVL	(2)	355	1	2126382
4200	13.2	1.0	1.6	chr2	148259886	148260562	(93932967)	C	Tigger1	DNA/TcMar-Tigger	(169)	2249	1577	2126381
462	28.9	15.0	6.0	chr2	148613825	148613978	(93579551)	+	MLT1M	LTR/ERVL-MaLR	106	283	(389)	2126876
2058	17.6	7.9	2.2	chr2	148613979	148614385	(93579144)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	2126878
230	27.9	11.9	0.0	chr2	149148280	149148383	(93045146)	+	L3b	LINE/CR1	4737	4854	(378)	2127681
257	28.7	2.1	1.1	chr2	149148477	149148571	(93044958)	C	Charlie4z	DNA/hAT-Charlie	(4)	163	68	2127682
695	14.4	5.3	0.8	chr2	149342194	149342319	(92851210)	C	MSTB	LTR/ERVL-MaLR	(294)	132	1	2127942
2137	9.0	0.7	4.0	chr2	149537812	149538111	(92655418)	+	AluSx	SINE/Alu	18	307	(5)	2128200
1750	17.0	7.8	2.4	chr2	150799222	150799595	(91393934)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2129884
9977	12.2	4.6	1.2	chr2	152058256	152059781	(90133748)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	2131779
2277	9.5	2.6	0.7	chr2	152172587	152172890	(90020639)	+	AluSz	SINE/Alu	1	310	(2)	2131987
227	33.3	8.3	1.0	chr2	154953729	154953828	(87239701)	C	L2a	LINE/L2	(44)	3382	3275	2135611
1289	28.9	7.9	2.2	chr2	158346114	158346612	(83846917)	+	LTR33A_	LTR/ERVL	1	530	(1)	2140036
604	32.2	10.2	7.5	chr2	158720084	158720859	(83472670)	C	LTR85c	LTR/Gypsy?	(13)	810	11	2140458
463	29.2	5.0	2.8	chr2	158727506	158727681	(83465848)	+	MIRb	SINE/MIR	28	207	(61)	2140465
487	30.2	10.7	4.2	chr2	158727682	158728013	(83465516)	C	MLT1K	LTR/ERVL-MaLR	(68)	527	172	2140466
259	34.2	7.0	0.0	chr2	158987656	158987775	(83205754)	+	MIRb	SINE/MIR	26	154	(114)	2140942
255	24.7	13.1	6.3	chr2	159214290	159214418	(82979111)	C	MIR3	SINE/MIR	(53)	155	15	2141268
6947	6.9	0.7	0.2	chr2	159724691	159725652	(82467877)	C	L1PA5	LINE/L1	(8)	6146	5183	2142041
343	28.3	8.2	2.5	chr2	159725627	159725822	(82467707)	C	HAL1	LINE/L1	(1508)	999	792	2142040
2029	16.2	3.0	2.5	chr2	160983963	160984323	(81209206)	+	THE1B	LTR/ERVL-MaLR	1	363	(1)	2143808
501	30.8	13.8	7.0	chr2	160984324	160984687	(81208842)	+	L2c	LINE/L2	2992	3380	(7)	2143807
22060	8.8	1.0	2.2	chr2	161010002	161016450	(81177079)	+	L1PA7	LINE/L1	6	6469	(0)	2143843
477	31.2	6.5	2.6	chr2	161692425	161692691	(80500838)	+	MamRep605	LTR?	19	296	(553)	2144745
187	13.5	5.1	2.6	chr2	163246195	163246232	(78947297)	+	AmnSINE1	SINE/5S-Deu-L2	510	548	(27)	2146701
9297	11.7	7.5	5.9	chr2	165590892	165592492	(76601037)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	2149856
359	33.7	9.4	6.5	chr2	169886639	169886959	(72306570)	C	L3	LINE/CR1	(550)	3549	3219	2155813
5155	19.8	7.7	4.9	chr2	170749163	170749646	(71443883)	+	L1MEc	LINE/L1	878	1375	(5025)	2157168
2378	12.5	3.7	0.5	chr2	170749647	170750015	(71443514)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2157169
8066	13.9	10.4	3.4	chr2	170914443	170915905	(71277624)	C	LTR12C	LTR/ERV1	(1)	1578	2	2157471
388	10.7	7.6	24.2	chr2	171277271	171277431	(70916098)	+	L1MEc	LINE/L1	1022	1153	(5247)	2158172
1805	20.0	7.6	1.6	chr2	171631165	171631606	(70561923)	+	LTR76	LTR/ERV1	205	675	(0)	2158788
1565	16.8	10.7	5.5	chr2	171631607	171631677	(70561852)	+	MER4CL34	LTR/ERV1	350	429	(336)	2158787
2246	12.2	0.0	3.6	chr2	171631678	171631980	(70561549)	C	AluSx	SINE/Alu	(20)	292	1	2158789
541	30.9	12.4	1.7	chr2	172028027	172028474	(70165055)	C	L2a	LINE/L2	(94)	3332	2835	2159487
10001	8.5	6.2	0.5	chr2	172802600	172804094	(69389435)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2160717
1909	12.1	4.4	2.1	chr2	173184627	173184916	(69008613)	+	AluSz6	SINE/Alu	1	297	(15)	2161261
11702	11.5	1.6	3.2	chr2	173592373	173594030	(68599499)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	2161900
1222	12.5	4.6	2.8	chr2	174190984	174191238	(68002291)	+	L1MA8	LINE/L1	6015	6274	(17)	2162841
1874	14.5	0.3	5.2	chr2	174191439	174191762	(68001767)	C	AluJr	SINE/Alu	(4)	308	1	2162842
382	28.1	6.2	1.6	chr2	174761112	174761234	(67432295)	+	Tigger16b	DNA/TcMar-Tigger	204	332	(4)	2163805
1534	14.4	0.0	11.4	chr2	174761316	174761613	(67431916)	C	AluJb	SINE/Alu	(47)	265	2	2163806
3883	9.8	0.2	3.3	chr2	174934008	174934553	(67258976)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2164033
2093	17.3	7.5	2.5	chr2	177407306	177407709	(64785820)	C	MSTA	LTR/ERVL-MaLR	(0)	428	3	2167627
3707	8.1	8.6	4.3	chr2	177546092	177546669	(64646860)	C	LTR14B	LTR/ERVK	(0)	608	4	2167775
2436	28.6	14.2	2.4	chr2	179833655	179835140	(62358389)	+	L1MC4a	LINE/L1	6103	7776	(266)	2170696
213	38.1	7.8	0.0	chr2	180119945	180120062	(62073467)	+	L2c	LINE/L2	3025	3152	(235)	2171076
561	22.9	2.9	8.1	chr2	180120106	180120290	(62073239)	+	MER5B	DNA/hAT-Charlie	4	178	(0)	2171077
468	35.3	11.8	5.9	chr2	180626987	180627698	(61565831)	+	L2b	LINE/L2	1322	2069	(1350)	2171708
226	25.8	0.0	0.0	chr2	182122635	182122696	(60070833)	+	L1MC5a	LINE/L1	2557	2618	(159)	2173547
250	23.2	0.0	0.0	chr2	182122770	182122825	(60070704)	C	L1MC5a	LINE/L1	(478)	2299	2244	2173548
16256	7.4	0.5	0.4	chr2	182122863	182124304	(60069225)	C	L1PA7	LINE/L1	(7)	6147	4697	2173549
10979	10.5	2.5	0.2	chr2	182375153	182376695	(59816834)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2173871
6177	13.5	2.6	1.4	chr2	182695706	182696805	(59496724)	+	L1MC1	LINE/L1	5188	6333	(0)	2174347
1876	16.7	2.7	0.3	chr2	182949520	182949813	(59243716)	+	AluJb	SINE/Alu	1	301	(11)	2174677
368	33.7	18.0	0.8	chr2	182949827	182950188	(59243341)	C	L2a	LINE/L2	(0)	3426	2989	2174678
11353	9.6	1.1	0.1	chr2	183153246	183154806	(59038723)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	4	2175025
2528	16.4	1.2	0.7	chr2	188378449	188378865	(53814664)	C	MSTB1	LTR/ERVL-MaLR	(13)	419	1	2181592
1129	29.6	7.0	1.1	chr2	189673196	189673667	(52519862)	+	L2b	LINE/L2	1998	2499	(920)	2183193
635	34.8	8.8	3.0	chr2	189673841	189674276	(52519253)	+	L2b	LINE/L2	2912	3375	(0)	2183193
4012	10.9	0.5	4.1	chr2	194367168	194367798	(47825731)	C	LTR14B	LTR/ERVK	(0)	608	1	2189587
2090	12.8	2.7	0.0	chr2	197050970	197051259	(45142270)	C	AluJb	SINE/Alu	(13)	299	2	2193322
11145	10.3	1.0	1.1	chr2	197590543	197592121	(44601408)	C	LTR12C	LTR/ERV1	(0)	1579	3	2194333
9747	11.4	3.7	5.3	chr2	198156854	198158461	(44035068)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2195120
468	30.1	8.1	6.3	chr2	198210244	198210605	(43982924)	C	HAL1	LINE/L1	(121)	2386	2005	2195191
452	26.5	20.3	3.6	chr2	199399438	199399508	(42794021)	C	MIRb	SINE/MIR	(14)	254	169	2196770
2151	12.9	7.9	3.0	chr2	199399509	199399914	(42793615)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2196771
2319	14.0	12.8	0.0	chr2	199833978	199834384	(42359145)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	2197402
225	26.0	19.0	5.0	chr2	199834549	199834750	(42358779)	+	LTR79	LTR/ERVL	285	521	(6)	2197403
853	20.8	5.3	13.6	chr2	200161407	200161769	(42031760)	C	MER21B	LTR/ERVL	(485)	453	25	2197910
322	25.0	5.7	0.0	chr2	200889152	200889251	(41304278)	C	MER94	DNA/hAT-Blackjack	(6)	128	23	2199071
325	22.0	7.1	0.0	chr2	202119504	202119594	(40073935)	C	Charlie15a	DNA/hAT-Charlie	(21)	203	106	2201245
1934	15.4	0.3	2.3	chr2	202119721	202119814	(40073715)	+	AluJb	SINE/Alu	1	94	(218)	2201246
3675	11.8	0.4	2.6	chr2	204064173	204064713	(38128816)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	2205079
7556	17.0	5.8	4.9	chr2	204222439	204224094	(37969435)	C	MER52D	LTR/ERV1	(0)	2123	1	2205318
12195	8.5	0.1	0.1	chr2	204412320	204413899	(37779630)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2205590
865	26.2	3.0	6.8	chr2	206253846	206254156	(35939373)	C	MER74A	LTR/ERVL	(29)	529	231	2208332
255	18.6	1.5	0.0	chr2	207636249	207636316	(34557213)	C	MIRb	SINE/MIR	(90)	178	106	2210364
2368	10.9	0.0	0.0	chr2	207676390	207676700	(34516829)	+	AluSx1	SINE/Alu	2	312	(0)	2210460
18	4.0	0.0	0.0	chr2	207676703	207676728	(34516801)	+	(AGAAA)n	Simple_repeat	1	26	(0)	2210461
3958	11.6	0.5	4.9	chr2	213660440	213661073	(28532456)	+	LTR14B	LTR/ERVK	3	608	(0)	2218510
2342	11.4	0.0	0.0	chr2	215840526	215840806	(26352723)	C	AluSx1	SINE/Alu	(31)	281	1	2221712
11	24.4	0.0	0.0	chr2	215840944	215840977	(26352552)	+	A-rich	Low_complexity	1	34	(0)	2221713
439	25.9	4.1	5.4	chr2	216575577	216575723	(25617806)	+	L2	LINE/L2	2321	2465	(954)	2223011
3557	14.4	2.6	0.4	chr2	217288393	217288909	(24904620)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2224179
1121	26.0	1.1	6.0	chr2	219660756	219661123	(22532406)	+	L2a	LINE/L2	3061	3410	(16)	2228279
201	28.1	0.0	1.7	chr2	219661139	219661196	(22532333)	C	MIRb	SINE/MIR	(2)	266	210	2228286
447	26.6	10.1	6.1	chr2	219661146	219661199	(22532330)	C	L2a	LINE/L2	(10)	3416	3364	2228287
2148	23.6	8.2	13.5	chr2	219661200	219661916	(22531613)	C	LTR76	LTR/ERV1	(0)	675	1	2228288
10121	11.8	3.1	3.8	chr2	220925551	220927139	(21266390)	C	THE1B-int	LTR/ERVL-MaLR	(2)	1578	1	2230272
16	26.3	0.0	1.9	chr2	221374932	221374984	(20818545)	+	A-rich	Low_complexity	1	53	(0)	2230980
717	34.2	9.0	0.9	chr2	221375025	221375475	(20818054)	C	L2	LINE/L2	(671)	2748	2258	2230981
551	28.4	13.5	3.6	chr2	222194087	222194528	(19999001)	+	LTR33	LTR/ERVL	23	509	(6)	2232267
3044	14.7	5.1	0.2	chr2	222810252	222810788	(19382741)	+	L1MC1	LINE/L1	5760	6324	(9)	2233247
255	17.9	0.0	0.0	chr2	223716722	223716760	(18476769)	+	tRNA-Ile-ATA	tRNA	1	39	(38)	2234703
2485	14.2	11.3	3.3	chr2	223716791	223717307	(18476222)	+	LTR6A	LTR/ERV1	1	564	(0)	2234704
1205	17.0	0.9	4.1	chr2	224389852	224390072	(17803457)	+	MER20	DNA/hAT-Charlie	1	214	(5)	2235835
2303	11.6	0.6	1.8	chr2	224636440	224636781	(17556748)	+	MER1B	DNA/hAT-Charlie	2	339	(0)	2236276
322	23.8	1.0	10.6	chr2	224636782	224636847	(17556682)	C	MLT1L	LTR/ERVL-MaLR	(54)	556	492	2236275
773	33.3	2.6	0.8	chr2	224664593	224664858	(17528671)	C	MER115	DNA/hAT-Tip100	(422)	271	1	2236328
2282	12.0	0.0	0.0	chr2	227682299	227682607	(14510922)	C	AluSx1	SINE/Alu	(3)	309	1	2240907
3411	12.9	1.7	2.8	chr2	227682608	227683015	(14510514)	C	MER1A	DNA/hAT-Charlie	(112)	417	3	2240906
277	32.6	5.3	3.3	chr2	230684820	230685003	(11508526)	+	L2a	LINE/L2	3239	3426	(0)	2245522
43	0.0	0.0	0.0	chr2	230987475	230987513	(11206016)	+	(CAGGGC)n	Simple_repeat	1	39	(0)	2246024
343	28.0	5.7	2.9	chr2	231017141	231017276	(11176253)	C	MLT1K	LTR/ERVL-MaLR	(2)	593	454	2246075
1817	24.9	3.2	2.4	chr2	231902383	231902881	(10290648)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	2247872
2350	11.8	0.0	0.9	chr2	231903067	231903381	(10290148)	C	AluSx1	SINE/Alu	(0)	312	1	2247873
306	24.6	8.3	0.0	chr2	234252413	234252534	(7940995)	+	L2a	LINE/L2	3271	3403	(23)	2251643
634	27.3	0.6	4.9	chr2	234471661	234471780	(7721749)	C	MER45A	DNA/hAT-Tip100	(1)	177	64	2252026
1603	23.8	1.9	7.8	chr2	234471781	234472029	(7721500)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	235	2252027
20	6.9	0.0	0.0	chr2	234496974	234497004	(7696525)	+	(GCTCCC)n	Simple_repeat	1	31	(0)	2252077
38	27.5	1.7	5.0	chr2	234497099	234497275	(7696254)	+	(CCCCG)n	Simple_repeat	1	180	(0)	2252078
10503	11.3	5.1	0.3	chr2	234696615	234698118	(7495411)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2252388
2895	23.7	5.2	4.3	chr2	236235994	236236559	(5956970)	+	L1ME1	LINE/L1	5775	6351	(1)	2254706
241	27.8	8.5	2.7	chr2	237421795	237421905	(4771624)	+	HAL1	LINE/L1	276	393	(2114)	2256324
433	33.8	2.8	3.6	chr2	237434933	237435181	(4758348)	C	L2c	LINE/L2	(224)	3163	2917	2256345
4008	9.9	0.6	0.9	chr2	237637985	237638515	(4555014)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2256638
2551	11.7	1.4	6.0	chr2	237786779	237787243	(4406286)	+	LTR14B	LTR/ERVK	166	608	(0)	2256839
1491	11.6	1.4	0.0	chr2	237787244	237787450	(4406079)	C	AluSx	SINE/Alu	(102)	210	1	2256838
400	27.6	17.3	2.5	chr2	238587241	238587485	(3606044)	C	L2a	LINE/L2	(26)	3400	3112	2258000
4362	11.5	1.9	4.3	chr2	239917169	239917860	(2275669)	+	LTR76	LTR/ERV1	1	675	(0)	2259470
3116	20.9	6.8	1.7	chr2	240427777	240429196	(1764333)	C	L1MB5	LINE/L1	(8)	6166	4669	2260043
2863	15.7	6.4	0.2	chr2	240854231	240854696	(1338833)	C	LOR1a	LTR/ERV1	(0)	497	1	2260466
197	36.1	3.0	1.0	chr2	240854704	240854801	(1338728)	C	MIRc	SINE/MIR	(59)	209	110	2260467
2823	30.4	13.2	8.5	chr2	241018046	241019840	(1173689)	C	HERVL40-int	LTR/ERVL	(411)	5119	3245	2260592
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
308	31.6	11.2	1.4	chr2	241147646	241147854	(1045675)	+	HAL1ME	LINE/L1	2085	2316	(149)	2260739
102	36.9	0.9	0.5	chr2	242064382	242064819	(128710)	+	(CA)n	Simple_repeat	1	442	(0)	2262017
8334	16.6	4.3	3.3	chr20	745330	746581	(63697586)	+	L1M4b	LINE/L1	1559	2843	(4024)	2263665
2123	5.5	6.3	3.1	chr20	818790	819081	(63625086)	C	AluY	SINE/Alu	(9)	302	1	2263795
76	21.7	2.2	0.5	chr20	819239	819417	(63624750)	+	(TCTC)n	Simple_repeat	1	182	(0)	2263796
780	17.2	15.8	0.0	chr20	856821	857012	(63587155)	C	L2a	LINE/L2	(0)	3426	3199	2263894
689	30.2	0.5	2.3	chr20	978177	978396	(63465771)	+	MIR	SINE/MIR	41	256	(6)	2264150
412	27.6	13.7	0.9	chr20	1042851	1043067	(63401100)	C	MIRb	SINE/MIR	(6)	262	5	2264309
547	26.4	2.2	12.8	chr20	1276388	1276661	(63167506)	+	MIRb	SINE/MIR	7	254	(14)	2264739
13	19.9	2.3	4.4	chr20	1392999	1393042	(63051125)	+	(GGC)n	Simple_repeat	1	45	(0)	2264924
16	26.7	2.9	4.3	chr20	1393093	1393160	(63051007)	+	(GC)n	Simple_repeat	1	70	(0)	2264925
1851	20.4	5.8	4.7	chr20	1421357	1421871	(63022296)	+	Charlie1b	DNA/hAT-Charlie	1	521	(2)	2264974
850	27.5	11.1	1.3	chr20	1422777	1423156	(63021011)	+	L2a	LINE/L2	3005	3426	(0)	2264977
491	25.4	12.6	0.6	chr20	1423158	1423525	(63020642)	C	L2b	LINE/L2	(167)	3259	2846	2264976
2025	13.5	0.7	0.7	chr20	2122050	2122346	(62321821)	+	AluSz	SINE/Alu	1	297	(15)	2266318
598	27.0	6.5	3.1	chr20	2673594	2673815	(61770352)	+	HERVL40-int	LTR/ERVL	1377	1606	(3924)	2267401
14	0.0	4.8	0.0	chr20	2814911	2814931	(61629236)	+	(CAG)n	Simple_repeat	1	22	(0)	2267644
2296	21.3	6.3	1.0	chr20	3855190	3855764	(60588403)	C	HAL1M8	LINE/L1	(2283)	708	102	2269651
478	23.4	1.6	0.6	chr20	3871875	3872009	(60572158)	C	MIR	SINE/MIR	(0)	268	130	2269684
1872	17.2	0.7	0.0	chr20	3872158	3872441	(60571726)	+	AluJr4	SINE/Alu	1	286	(26)	2269685
1286	20.1	27.6	3.1	chr20	3874374	3874819	(60569348)	C	MER89	LTR/ERV1	(0)	559	3	2269690
640	21.5	0.8	0.8	chr20	4037816	4037937	(60406230)	C	MLT1D	LTR/ERVL-MaLR	(383)	122	1	2269998
27	18.6	1.8	0.0	chr20	4038092	4038146	(60406021)	+	(TG)n	Simple_repeat	1	56	(0)	2269999
1768	12.2	9.6	0.0	chr20	4673223	4673475	(59770692)	C	AluSg	SINE/Alu	(30)	280	1	2271131
1628	26.9	4.1	1.3	chr20	4673541	4674014	(59770153)	C	MER74B	LTR/ERVL	(75)	547	60	2271132
244	21.2	16.9	3.3	chr20	4674167	4674288	(59769879)	+	L5	LINE/RTE-X	2047	2188	(77)	2271134
276	37.0	4.9	1.7	chr20	4674329	4674504	(59769663)	+	MamSINE1	SINE/tRNA-RTE	70	251	(39)	2271135
2087	15.0	9.5	3.6	chr20	5188602	5189017	(59255150)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	15	2272191
306	32.6	14.9	6.8	chr20	5603302	5603565	(58840602)	C	L2b	LINE/L2	(98)	3277	2973	2272834
459	26.8	15.3	3.4	chr20	9190568	9190768	(55253399)	C	L2a	LINE/L2	(744)	2675	2435	2278521
532	28.2	3.7	0.6	chr20	9190793	9190949	(55253218)	C	MIRb	SINE/MIR	(82)	186	25	2278526
547	28.8	23.7	4.0	chr20	10343471	10343874	(54100293)	+	LTR16C	LTR/ERVL	6	489	(0)	2280371
9530	8.4	1.2	0.5	chr20	10363262	10364537	(54079630)	+	HSMAR1	DNA/TcMar-Mariner	2	1287	(0)	2280420
1364	20.8	8.0	3.0	chr20	10364538	10364990	(54079177)	+	L1ME3A	LINE/L1	5589	6101	(61)	2280419
669	16.1	2.7	2.0	chr20	11125176	11125321	(53318846)	+	MER121	DNA/hAT?	54	200	(201)	2281568
1145	24.3	5.5	5.4	chr20	11401088	11401544	(53042623)	+	MER39	LTR/ERV1	1	671	(36)	2281950
422	29.1	14.2	1.6	chr20	11554526	11554909	(52889258)	+	LTR16A2	LTR/ERVL	57	491	(4)	2282140
435	24.8	5.0	5.1	chr20	13261450	13261538	(51182629)	C	MLT1H2	LTR/ERVL-MaLR	(406)	83	1	2284624
236	28.7	3.8	1.0	chr20	13261544	13261645	(51182522)	C	MIRc	SINE/MIR	(152)	116	12	2284626
271	31.8	3.7	4.4	chr20	15487281	15487415	(48956752)	+	MamGypsy2-I	LTR/Gypsy	436	569	(3597)	2287976
1097	24.6	15.3	5.9	chr20	16067188	16067697	(48376470)	+	MLT1G1	LTR/ERVL-MaLR	1	567	(12)	2288823
903	15.8	1.4	0.0	chr20	18631216	18631361	(45812806)	C	MER45A	DNA/hAT-Tip100	(0)	178	31	2293015
618	26.6	3.9	9.1	chr20	18793954	18794451	(45649716)	+	MLT2F	LTR/ERVL	5	663	(0)	2293236
1661	27.6	4.7	0.2	chr20	18839245	18839691	(45604476)	+	MLT1H	LTR/ERVL-MaLR	12	479	(70)	2293327
717	20.0	3.7	0.0	chr20	20015003	20015157	(44429010)	C	MIR	SINE/MIR	(5)	257	97	2295057
7237	13.5	1.4	4.5	chr20	20130305	20131293	(44312874)	C	L1MA4	LINE/L1	(4345)	2220	1239	2295224
2506	15.8	3.1	3.5	chr20	20313692	20314104	(44130063)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	50	2295473
1718	18.0	0.0	2.6	chr20	20314105	20314409	(44129758)	+	AluJb	SINE/Alu	4	300	(12)	2295474
367	24.8	9.4	3.3	chr20	20328912	20329061	(44115106)	+	MER90a	LTR/ERV1	454	613	(1)	2295497
227	31.0	6.5	2.7	chr20	20333829	20333977	(44110190)	C	L4_A_Mam	LINE/RTE-X	(794)	4196	4042	2295505
322	19.8	2.9	12.2	chr20	22627911	22628025	(41816142)	C	L1ME3E	LINE/L1	(1405)	4741	4638	2298661
1029	14.0	3.1	3.6	chr20	22986288	22986480	(41457687)	+	MER53	DNA/hAT	1	192	(1)	2299095
23	15.6	6.0	0.0	chr20	22986486	22986535	(41457632)	+	(GT)n	Simple_repeat	1	53	(0)	2299096
3160	22.2	14.2	7.6	chr20	24140877	24141820	(40302347)	C	LTR28	LTR/ERV1	(4)	1016	1	2300543
18	22.0	0.0	0.0	chr20	24791190	24791226	(39652941)	+	(T)n	Simple_repeat	1	37	(0)	2301345
28296	12.4	1.6	1.3	chr20	25402413	25402759	(39041408)	C	HERVK3-int	LTR/ERVK	(6845)	357	15	2302106
3143	11.4	0.6	3.6	chr20	25402773	25403271	(39040896)	C	LTR3A	LTR/ERVK	(0)	484	1	2302111
7024	15.1	2.3	1.7	chr20	25853807	25855190	(38588977)	C	SST1	Satellite/centr	(170)	1393	1	2302853
1081	29.7	9.4	0.4	chr20	26269604	26270059	(38174108)	+	LTR16E1	LTR/ERVL	23	523	(15)	2303523
269	28.6	12.5	5.2	chr20	31517426	31517713	(32926454)	C	L2b	LINE/L2	(10)	3365	3054	2306158
1632	16.1	14.1	2.4	chr20	31572153	31572317	(32871850)	C	Tigger2a	DNA/TcMar-Tigger	(257)	177	2	2306290
257	21.6	11.7	0.0	chr20	31572327	31572418	(32871749)	C	MIR	SINE/MIR	(73)	195	96	2306293
403	33.1	9.3	0.6	chr20	31720606	31720772	(32723395)	C	MIRb	SINE/MIR	(28)	240	58	2306713
2038	13.2	0.7	0.0	chr20	32325656	32325966	(32118201)	C	AluSq	SINE/Alu	(0)	313	1	2308221
395	29.8	2.7	2.2	chr20	32359380	32359561	(32084606)	C	MER5A	DNA/hAT-Charlie	(0)	189	7	2308301
521	20.7	3.9	20.5	chr20	33401624	33401937	(31042230)	+	MER33	DNA/hAT-Charlie	14	267	(57)	2310618
16	24.5	0.0	0.0	chr20	33748877	33748919	(30695248)	+	(CTCT)n	Simple_repeat	1	43	(0)	2311503
432	35.2	10.8	0.2	chr20	33772425	33772797	(30671370)	C	L2c	LINE/L2	(44)	3343	2913	2311569
21	26.9	2.1	4.1	chr20	33811326	33811395	(30632772)	+	(GCGGAG)n	Simple_repeat	1	69	(0)	2311672
33	2.8	0.0	0.0	chr20	33811396	33811431	(30632736)	+	(GAGCC)n	Simple_repeat	1	36	(0)	2311673
667	28.2	3.1	10.7	chr20	33967782	33968023	(30476144)	+	MLT1N2	LTR/ERVL-MaLR	6	228	(334)	2312031
2034	12.9	0.0	1.1	chr20	33968027	33968304	(30475863)	+	AluSz	SINE/Alu	2	276	(36)	2312032
228	26.5	0.0	0.0	chr20	35215346	35215394	(29228773)	+	L2c	LINE/L2	3117	3165	(222)	2314792
334	25.1	20.1	1.1	chr20	35215620	35215796	(29228371)	+	MIRb	SINE/MIR	23	241	(27)	2314793
2559	6.5	0.0	1.0	chr20	35647029	35647336	(28796831)	+	AluSq10	SINE/Alu	1	305	(8)	2315743
572	13.6	3.7	0.0	chr20	35647337	35647430	(28796737)	C	U6	snRNA	(8)	99	2	2315744
1936	11.7	6.2	0.0	chr20	36556996	36557268	(27886899)	+	AluSx1	SINE/Alu	1	291	(21)	2317881
4234	8.1	0.6	0.2	chr20	37293083	37293603	(27150564)	C	MER1A	DNA/hAT-Charlie	(2)	527	5	2319683
3453	14.6	1.8	1.8	chr20	37968865	37969437	(26474730)	C	L1PB1	LINE/L1	(5670)	1193	621	2321169
7589	14.7	6.4	8.7	chr20	38029007	38029691	(26414476)	+	L1MDa	LINE/L1	3077	3734	(2803)	2321277
2142	12.5	17.5	0.3	chr20	38029692	38030045	(26414122)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2321284
492	28.6	11.5	1.3	chr20	38156120	38156346	(26287821)	+	MIRb	SINE/MIR	4	256	(12)	2321508
706	32.1	2.6	2.6	chr20	38243015	38243318	(26200849)	+	MamGypLTR3a	LTR/Gypsy	678	981	(0)	2321713
741	25.9	5.5	1.8	chr20	38291495	38291722	(26152445)	+	MIR	SINE/MIR	16	252	(10)	2321833
386	30.7	0.7	2.0	chr20	38626325	38626477	(25817690)	+	MER5A	DNA/hAT-Charlie	1	151	(38)	2322501
1879	24.1	5.7	2.1	chr20	38651081	38651551	(25792616)	C	LTR16C	LTR/ERVL	(0)	489	1	2322560
2211	14.5	0.7	0.0	chr20	40309030	40309333	(24134834)	+	AluSz	SINE/Alu	1	306	(6)	2325536
2154	18.5	5.0	7.0	chr20	40309334	40309515	(24134652)	+	L1MC2	LINE/L1	6185	6336	(8)	2325535
910	24.6	14.9	0.5	chr20	40390641	40391018	(24053149)	C	MLT2F	LTR/ERVL	(230)	433	1	2325678
188	39.2	0.0	0.0	chr20	43832513	43832586	(20611581)	C	MIRb	SINE/MIR	(107)	161	88	2332077
758	26.2	5.2	11.2	chr20	43868097	43868189	(20575978)	+	MLT1B	LTR/ERVL-MaLR	19	102	(306)	2332165
2182	13.1	3.9	0.0	chr20	43868190	43868539	(20575628)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2332166
263	38.4	1.8	0.9	chr20	43970039	43970143	(20474024)	C	L2b	LINE/L2	(17)	3358	3253	2332368
573	31.6	9.7	3.3	chr20	44075260	44075834	(20368333)	C	L2b	LINE/L2	(139)	3287	2668	2332586
17	8.1	7.3	2.3	chr20	44531882	44531922	(19912245)	+	G-rich	Low_complexity	1	44	(0)	2333726
21608	6.4	0.9	0.3	chr20	45139878	45142525	(19301642)	C	HERVL-int	LTR/ERVL	(2989)	2665	1	2335102
439	25.6	7.4	0.1	chr20	45294095	45294254	(19149913)	+	MIRb	SINE/MIR	15	185	(77)	2335323
3544	13.0	1.3	4.2	chr20	45294692	45295236	(19148931)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	2335327
1157	24.2	12.6	1.5	chr20	45445606	45446221	(18997946)	C	L2a	LINE/L2	(0)	3426	2708	2335658
259	23.7	3.8	1.3	chr20	45466113	45466189	(18977978)	C	MLT1K	LTR/ERVL-MaLR	(497)	98	20	2335718
310	36.3	9.4	2.8	chr20	46158756	46158973	(18285194)	C	MIRb	SINE/MIR	(26)	242	9	2337061
3055	12.1	12.1	0.6	chr20	47853088	47853555	(16590612)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2340984
1153	21.7	14.5	5.2	chr20	47854897	47855342	(16588825)	C	LTR55	LTR/ERVL?	(10)	538	51	2340989
586	27.4	1.8	5.2	chr20	47948639	47948683	(16495484)	+	L2a	LINE/L2	2764	2803	(616)	2341169
3552	11.0	0.2	2.5	chr20	47992898	47993420	(16450747)	C	MER61E	LTR/ERV1	(58)	511	1	2341250
563	29.8	9.1	3.5	chr20	48003916	48004225	(16439942)	C	MLT1K	LTR/ERVL-MaLR	(257)	338	10	2341272
941	24.1	11.2	5.1	chr20	48276611	48276964	(16167203)	C	LTR33	LTR/ERVL	(3)	512	129	2341800
11	21.8	5.4	6.4	chr20	48921544	48921617	(15522550)	+	(CCCTTCG)n	Simple_repeat	1	78	(0)	2343219
549	26.9	3.4	6.7	chr20	50050378	50050586	(14393581)	C	L2a	LINE/L2	(22)	3404	3148	2345959
2179	12.7	0.7	0.0	chr20	50073799	50074105	(14370062)	C	AluSx	SINE/Alu	(3)	309	1	2346028
735	28.5	12.0	0.3	chr20	50109769	50110010	(14334157)	C	MamRep137	DNA/TcMar-Tigger	(112)	398	115	2346102
461	27.4	4.8	8.7	chr20	50169704	50169811	(14274356)	+	MIRb	SINE/MIR	41	154	(114)	2346259
1078	30.4	4.1	9.0	chr20	50199628	50200140	(14244027)	+	MLT1J	LTR/ERVL-MaLR	26	512	(0)	2346342
850	17.3	0.0	0.8	chr20	50426863	50426995	(14017172)	C	AluJo	SINE/Alu	(180)	132	1	2346895
348	31.3	2.6	5.1	chr20	50427022	50427179	(14016988)	C	MLT1L	LTR/ERVL-MaLR	(335)	275	122	2346893
335	29.8	11.2	7.1	chr20	50794681	50794850	(13649317)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	2347757
18	20.4	0.0	3.6	chr20	51370047	51370084	(13074083)	+	(TTCA)n	Simple_repeat	1	36	(0)	2349010
2201	11.9	0.0	0.3	chr20	51370085	51370379	(13073788)	C	AluSx	SINE/Alu	(18)	294	1	2349011
516	28.7	19.2	3.4	chr20	51865501	51865822	(12578345)	+	L2	LINE/L2	2284	2679	(740)	2350108
2897	26.4	7.8	8.3	chr20	52212101	52212783	(12231384)	C	HAL1	LINE/L1	(1683)	824	159	2351015
181	27.8	19.1	1.1	chr20	53608734	53608922	(10835245)	+	MIR	SINE/MIR	21	251	(11)	2353852
2771	7.7	0.6	0.0	chr20	53911026	53911378	(10532789)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2354650
396	32.1	9.3	5.8	chr20	54133698	54134091	(10310076)	C	L2a	LINE/L2	(1)	3425	3017	2355121
291	32.0	3.4	5.5	chr20	54134076	54134257	(10309910)	C	L2	LINE/L2	(339)	3080	2903	2355122
906	27.8	15.5	1.2	chr20	54134318	54134419	(10309748)	+	L2a	LINE/L2	1075	1182	(2237)	2355123
2899	12.4	6.0	0.0	chr20	56224820	56225270	(8218897)	+	MER9a3	LTR/ERVK	33	512	(0)	2358625
334	26.6	0.0	0.0	chr20	56225271	56225349	(8218818)	C	MLT1E2	LTR/ERVL-MaLR	(404)	101	23	2358624
1255	23.2	10.3	0.8	chr20	56707729	56708106	(7736061)	C	MLT1C	LTR/ERVL-MaLR	(49)	418	1	2359665
1001	25.3	4.2	5.0	chr20	56987272	56987708	(7456459)	C	L1ME3G	LINE/L1	(325)	599	167	2360315
182	26.5	0.0	3.9	chr20	57244005	57244055	(7200112)	+	MIR	SINE/MIR	126	174	(88)	2360826
602	28.6	1.7	0.0	chr20	57244092	57244266	(7199901)	C	MER5A	DNA/hAT-Charlie	(8)	181	4	2360827
373	29.4	3.8	3.8	chr20	57689963	57690093	(6754074)	C	MIRb	SINE/MIR	(16)	252	122	2361599
670	28.1	11.3	2.3	chr20	57775488	57775833	(6668334)	C	L1ME5	LINE/L1	(191)	6003	5623	2361778
2413	24.2	6.2	5.8	chr20	58201657	58202416	(6241751)	+	L1MB7	LINE/L1	5397	6166	(18)	2362580
255	32.2	11.4	4.6	chr20	58554509	58554910	(5889257)	C	L2a	LINE/L2	(2)	3424	2936	2363125
18	15.0	11.6	1.3	chr20	58891914	58891939	(5552228)	+	(GCGCC)n	Simple_repeat	1	76	(0)	2363589
15	17.0	2.4	2.3	chr20	58891940	58891981	(5552186)	+	(CCCGCCC)n	Simple_repeat	1	43	(0)	2363590
28	17.8	0.0	0.0	chr20	58892124	58892174	(5551993)	+	(TC)n	Simple_repeat	1	51	(0)	2363591
460	30.0	8.2	2.1	chr20	59138511	59138704	(5305463)	+	MLT1I	LTR/ERVL-MaLR	1	207	(204)	2363988
1610	22.9	18.6	1.4	chr20	60810359	60810932	(3633235)	C	MLT1E	LTR/ERVL-MaLR	(0)	680	8	2366494
219	27.6	9.5	0.0	chr20	62505035	62505110	(1939057)	C	L2c	LINE/L2	(28)	3359	3276	2368641
984	29.4	4.5	1.7	chr20	62572082	62572617	(1871550)	C	L1MC5	LINE/L1	(10)	2981	2554	2368707
1960	13.6	2.0	1.7	chr21	6129309	6129603	(40580380)	C	AluJb	SINE/Alu	(12)	300	5	2371560
2070	28.9	2.5	6.8	chr21	6129604	6130187	(40579796)	C	L1ME1	LINE/L1	(842)	5337	4778	2371559
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
2828	18.2	1.6	1.8	chr21	7942700	7957766	(38752217)	+	(CATTC)n	Satellite	1	15309	(0)	2373121
285	27.6	2.8	10.5	chr21	8205786	8206586	(38503397)	+	FordPrefect	DNA/hAT-Tip100	218	955	(728)	2373266
12	20.8	0.0	2.9	chr21	8206869	8206903	(38503080)	+	(CCG)n	Simple_repeat	1	35	(0)	2373267
16721	0.1	0.0	0.0	chr21	8209631	8211499	(38498484)	+	SSU-rRNA_Hsa	rRNA	1	1869	(0)	2373269
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
62	1.7	0.0	0.0	chr21	8222330	8222389	(38487594)	+	(TTCC)n	Simple_repeat	1	60	(0)	2373297
316	25.2	0.9	9.0	chr21	8222430	8222551	(38487432)	C	AluJb	SINE/Alu	(71)	231	120	2373298
66	0.0	0.0	0.0	chr21	8222572	8222627	(38487356)	+	(GT)n	Simple_repeat	1	56	(0)	2373299
385	20.4	2.0	0.0	chr21	8222947	8223054	(38486929)	C	AluJb	SINE/Alu	(175)	127	15	2373298
1584	14.5	0.4	0.4	chr21	8223156	8223396	(38486587)	C	AluSp	SINE/Alu	(4)	309	69	2373303
51	0.0	0.0	0.0	chr21	8224496	8224539	(38485444)	+	(TC)n	Simple_repeat	1	44	(0)	2373306
529	18.9	6.8	3.1	chr21	8225005	8225131	(38484852)	+	AluJb	SINE/Alu	130	261	(51)	2373308
29	26.2	0.9	4.5	chr21	8225165	8225210	(38484773)	+	(TTTTC)n	Simple_repeat	1	46	(0)	2373309
47	0.0	0.0	0.0	chr21	8225211	8225253	(38484730)	+	(TTTC)n	Simple_repeat	1	43	(0)	2373310
29	26.2	0.9	4.5	chr21	8225254	8225316	(38484667)	+	(TTTTC)n	Simple_repeat	2	60	(0)	2373311
51	4.3	4.2	0.0	chr21	8226956	8227026	(38482957)	+	(GA)n	Simple_repeat	1	74	(0)	2373320
1770	13.9	4.3	1.7	chr21	8227120	8227414	(38482569)	C	AluSz	SINE/Alu	(0)	312	10	2373321
797	22.4	0.5	0.1	chr21	8228115	8229742	(38480241)	+	(TCTC)n	Simple_repeat	1	1633	(0)	2373325
255	24.7	1.7	0.4	chr21	8229744	8229975	(38480008)	C	HERVIP10FH-int	LTR/ERV1	(4089)	1013	779	2373326
797	22.4	0.5	0.1	chr21	8229975	8230765	(38479218)	+	(TCTC)n	Simple_repeat	2	795	(0)	2373327
1247	22.8	0.6	0.2	chr21	8232546	8235312	(38474671)	+	(TCTC)n	Simple_repeat	1	2784	(0)	2373335
244	32.7	0.0	2.6	chr21	8238165	8238277	(38471706)	C	L1MD	LINE/L1	(585)	5774	5665	2373342
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
208	30.1	5.7	2.4	chr21	8242607	8242691	(38467292)	C	OldhAT1	DNA/hAT-Ac	(843)	2005	1918	2373347
612	18.1	0.0	13.2	chr21	8243691	8243856	(38466127)	+	AluJb	SINE/Alu	137	280	(32)	2373349
28	0.0	0.0	0.0	chr21	8243858	8243884	(38466099)	+	(CAGG)n	Simple_repeat	1	27	(0)	2373350
2071	12.8	0.3	0.0	chr21	8243955	8244252	(38465731)	C	AluSp	SINE/Alu	(14)	299	1	2373351
2395	8.6	0.0	1.6	chr21	8244260	8244314	(38465669)	C	AluY	SINE/Alu	(0)	311	284	2373352
45	2.0	0.0	3.6	chr21	8244315	8244369	(38465614)	+	(TATT)n	Simple_repeat	1	55	(0)	2373353
2395	8.6	0.0	1.6	chr21	8244370	8244652	(38465331)	C	AluY	SINE/Alu	(28)	283	1	2373352
23	7.9	2.4	0.0	chr21	8244653	8244668	(38465315)	+	(TTTA)n	Simple_repeat	2	17	(0)	2373354
610	12.5	10.7	2.5	chr21	8244716	8244835	(38465148)	C	FLAM_C	SINE/Alu	(10)	133	3	2373355
1878	11.0	2.0	3.9	chr21	8246147	8246456	(38463527)	+	AluSg4	SINE/Alu	1	304	(6)	2373360
2318	10.4	0.0	1.3	chr21	8247000	8247290	(38462693)	C	AluSp	SINE/Alu	(21)	292	2	2373363
50	0.0	0.0	0.0	chr21	8247291	8247333	(38462650)	+	(CT)n	Simple_repeat	1	43	(0)	2373365
20	13.7	6.9	0.0	chr21	8247334	8247354	(38462629)	+	(TTGCC)n	Simple_repeat	1	25	(0)	2373366
18	13.2	0.0	0.0	chr21	8247355	8247366	(38462617)	+	(GCTT)n	Simple_repeat	1	33	(0)	2373367
391	33.4	8.5	4.6	chr21	8247367	8247898	(38462085)	C	L1MC4	LINE/L1	(1206)	1369	827	2373368
89	22.6	2.4	2.3	chr21	8248531	8248781	(38461202)	+	(TTTC)n	Simple_repeat	1	257	(0)	2373370
15277	0.5	0.4	0.1	chr21	8253842	8255704	(38454279)	+	SSU-rRNA_Hsa	rRNA	1	1869	(0)	2373378
21300	0.4	1.7	0.6	chr21	8258109	8258957	(38451026)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373390
21300	0.4	1.7	0.6	chr21	8259002	8260971	(38449012)	+	LSU-rRNA_Hsa	rRNA	878	2852	(2183)	2373390
89	22.6	2.4	2.3	chr21	8387387	8387637	(38322346)	+	(TTTC)n	Simple_repeat	1	257	(0)	2373489
15725	0.1	0.0	0.0	chr21	8392666	8394534	(38315449)	+	SSU-rRNA_Hsa	rRNA	1	1869	(0)	2373499
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
67	1.6	0.0	0.0	chr21	8404787	8404848	(38305135)	+	(AC)n	Simple_repeat	1	62	(0)	2373525
13	13.1	0.0	0.0	chr21	8404970	8404994	(38304989)	+	(TCCT)n	Simple_repeat	1	25	(0)	2373526
330	33.6	0.0	0.9	chr21	8405064	8405170	(38304813)	+	AluJb	SINE/Alu	152	257	(55)	2373527
62	1.7	0.0	0.0	chr21	8405329	8405388	(38304595)	+	(TTCC)n	Simple_repeat	1	60	(0)	2373528
316	25.2	0.9	9.0	chr21	8405429	8405550	(38304433)	C	AluJb	SINE/Alu	(71)	231	120	2373529
816	26.5	0.0	6.3	chr21	8409679	8409948	(38300035)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373550
51	4.3	4.2	0.0	chr21	8409955	8410025	(38299958)	+	(GA)n	Simple_repeat	1	74	(0)	2373551
1583	14.2	0.0	4.2	chr21	8410727	8410955	(38299028)	+	AluSx1	SINE/Alu	64	289	(23)	2373554
986	23.4	0.5	0.3	chr21	8411114	8413351	(38296632)	+	(TCTC)n	Simple_repeat	1	2248	(0)	2373556
28	0.0	0.0	0.0	chr21	8414641	8414667	(38295316)	+	(TAAC)n	Simple_repeat	1	27	(0)	2373561
1583	14.2	0.0	4.2	chr21	8414763	8414991	(38294992)	+	AluSx1	SINE/Alu	64	289	(23)	2373562
957	23.1	0.7	0.2	chr21	8415138	8417312	(38292671)	+	(TCTC)n	Simple_repeat	1	2191	(0)	2373564
1238	13.4	0.0	3.0	chr21	8418003	8418204	(38291779)	+	AluSx1	SINE/Alu	95	290	(22)	2373568
114	18.9	0.9	0.0	chr21	8419559	8419780	(38290203)	+	(CT)n	Simple_repeat	1	224	(0)	2373572
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
828	16.3	0.0	0.0	chr21	8422117	8422239	(38287744)	C	AluSx3	SINE/Alu	(9)	302	180	2373578
208	30.1	5.7	2.4	chr21	8425631	8425715	(38284268)	C	OldhAT1	DNA/hAT-Ac	(843)	2005	1918	2373582
612	18.1	0.0	13.2	chr21	8426715	8426880	(38283103)	+	AluJb	SINE/Alu	137	280	(32)	2373584
1878	11.0	2.0	3.9	chr21	8429171	8429480	(38280503)	+	AluSg4	SINE/Alu	1	304	(6)	2373595
391	33.4	8.5	4.6	chr21	8430391	8430922	(38279061)	C	L1MC4	LINE/L1	(1206)	1369	827	2373603
2003	14.4	0.0	2.2	chr21	8430923	8431242	(38278741)	C	AluSp	SINE/Alu	(0)	313	1	2373604
89	22.6	2.4	2.3	chr21	8431555	8431805	(38278178)	+	(TTTC)n	Simple_repeat	1	257	(0)	2373605
14	18.8	0.0	0.0	chr21	8433598	8433628	(38276355)	+	(GCCG)n	Simple_repeat	1	31	(0)	2373610
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
152	15.4	0.0	0.0	chr21	8447861	8448171	(38261812)	+	(TCTC)n	Simple_repeat	1	311	(0)	2373632
67	1.6	0.0	0.0	chr21	8448994	8449055	(38260928)	+	(AC)n	Simple_repeat	1	62	(0)	2373638
13	13.1	0.0	0.0	chr21	8449177	8449201	(38260782)	+	(TCCT)n	Simple_repeat	1	25	(0)	2373639
62	1.7	0.0	0.0	chr21	8449536	8449595	(38260388)	+	(TTCC)n	Simple_repeat	1	60	(0)	2373641
316	25.2	0.9	9.0	chr21	8449636	8449757	(38260226)	C	AluJb	SINE/Alu	(71)	231	120	2373642
1584	14.5	0.4	0.4	chr21	8450342	8450582	(38259401)	C	AluSp	SINE/Alu	(4)	309	69	2373647
37	0.0	0.0	0.0	chr21	8451682	8451713	(38258270)	+	(TC)n	Simple_repeat	1	32	(0)	2373650
882	19.8	13.0	6.1	chr21	8452628	8452782	(38257201)	C	AluJr	SINE/Alu	(26)	286	137	2373657
2099	14.7	0.3	0.0	chr21	8452783	8453088	(38256895)	C	AluSp	SINE/Alu	(6)	307	1	2373658
15	0.0	0.0	0.0	chr21	8453786	8453804	(38256179)	+	(CAC)n	Simple_repeat	1	19	(0)	2373662
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
785	22.6	0.5	0.1	chr21	8455261	8456884	(38253099)	+	(TCTC)n	Simple_repeat	1	1629	(0)	2373669
785	22.6	0.5	0.1	chr21	8457117	8457903	(38252080)	+	(TCTC)n	Simple_repeat	2	791	(0)	2373671
860	22.5	0.5	0.2	chr21	8459700	8461464	(38248519)	+	(TCTC)n	Simple_repeat	1	1773	(0)	2373679
311	33.3	9.7	0.6	chr21	8461465	8461633	(38248350)	C	L1MEg	LINE/L1	(5029)	1055	870	2373680
860	22.5	0.5	0.2	chr21	8461640	8462268	(38247715)	+	(TCTC)n	Simple_repeat	4	633	(0)	2373681
1238	13.4	0.0	3.0	chr21	8462566	8462767	(38247216)	+	AluSx1	SINE/Alu	95	290	(22)	2373683
244	32.7	0.0	2.6	chr21	8465772	8465884	(38244099)	C	L1MD	LINE/L1	(585)	5774	5665	2373689
973	13.3	14.2	3.3	chr21	8466700	8466880	(38243103)	C	AluSc8	SINE/Alu	(9)	302	99	2373690
612	18.1	0.0	13.2	chr21	8471276	8471441	(38238542)	+	AluJb	SINE/Alu	137	280	(32)	2373695
2071	12.8	0.3	0.0	chr21	8471540	8471837	(38238146)	C	AluSp	SINE/Alu	(14)	299	1	2373697
864	20.7	7.5	13.0	chr21	9949759	9950262	(36759721)	C	MER52-int	LTR/ERV1	(6205)	886	195	2375066
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
7492	7.4	1.4	2.7	chr21	13023725	13024739	(33685244)	+	LTR5B	LTR/ERVK	1	1002	(0)	2375926
1291	16.8	5.7	8.9	chr21	21964370	21964573	(24745410)	+	L1MA7	LINE/L1	5957	6134	(157)	2387700
2727	5.0	0.3	0.0	chr21	21964574	21964912	(24745071)	C	LTR14A	LTR/ERVK	(4)	340	1	2387701
2366	8.7	0.0	0.3	chr21	26172514	26172813	(20537170)	+	AluSx	SINE/Alu	1	299	(13)	2393609
774	19.6	1.2	9.7	chr21	26172814	26172927	(20537056)	C	MER45A	DNA/hAT-Tip100	(68)	110	1	2393608
2314	2.7	0.0	0.0	chr21	26172964	26173221	(20536762)	+	AluY	SINE/Alu	37	294	(17)	2393610
241	30.1	14.0	5.1	chr21	26737274	26737448	(19972535)	+	L2b	LINE/L2	2658	2850	(569)	2394419
352	32.6	8.0	10.5	chr21	26737510	26737865	(19972118)	+	L2b	LINE/L2	2914	3267	(120)	2394419
383	31.4	1.3	3.1	chr21	26799371	26799531	(19910452)	+	Charlie4z	DNA/hAT-Charlie	2	159	(8)	2394525
1701	23.4	4.2	1.9	chr21	26981692	26982175	(19727808)	+	L1MC3	LINE/L1	6891	7386	(399)	2394748
585	22.0	0.0	4.5	chr21	31082707	31082839	(15627144)	C	MER5A1	DNA/hAT-Charlie	(34)	132	6	2400729
20	0.0	0.0	0.0	chr21	31398159	31398180	(15311803)	+	(A)n	Simple_repeat	1	22	(0)	2401252
12	11.9	0.0	6.5	chr21	31558175	31558205	(15151778)	+	(GCGCA)n	Simple_repeat	1	31	(0)	2401593
1660	12.2	2.5	1.4	chr21	31589057	31589331	(15120652)	+	MER65A	LTR/ERV1	168	445	(0)	2401665
294	13.0	2.1	0.0	chr21	31589332	31589377	(15120606)	+	MLT1A0	LTR/ERVL-MaLR	101	147	(218)	2401663
2224	9.9	0.7	1.6	chr21	31589388	31589691	(15120292)	+	AluSx	SINE/Alu	1	301	(11)	2401668
3551	13.7	0.2	2.4	chr21	31596114	31596653	(15113330)	+	MER1A	DNA/hAT-Charlie	1	528	(1)	2401685
3708	12.3	1.3	0.0	chr21	31790315	31790836	(14919147)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2402091
3812	10.0	0.8	0.6	chr21	32104428	32104931	(14605052)	+	MER1A	DNA/hAT-Charlie	25	529	(0)	2402666
5740	11.8	1.0	0.5	chr21	32452314	32453108	(14256875)	C	LTR1A1	LTR/ERV1	(0)	799	1	2403228
1886	24.3	14.4	0.5	chr21	32898323	32898963	(13811020)	+	LTR50	LTR/ERVL	1	745	(50)	2403960
2276	13.4	4.9	3.3	chr21	33011707	33012131	(13697852)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	2404160
312	33.6	5.3	3.7	chr21	33056852	33057092	(13652891)	C	L2a	LINE/L2	(264)	3162	2918	2404226
19	0.0	0.0	0.0	chr21	33057141	33057161	(13652822)	+	(CT)n	Simple_repeat	1	21	(0)	2404227
2483	15.3	1.9	3.5	chr21	33161390	33161617	(13548366)	+	MSTB	LTR/ERVL-MaLR	1	223	(203)	2404411
1783	11.6	4.8	4.1	chr21	33161618	33161910	(13548073)	C	AluSz6	SINE/Alu	(16)	296	2	2404412
226	26.7	3.7	3.7	chr21	33240055	33240158	(13469825)	+	LTR33	LTR/ERVL	334	437	(78)	2404570
390	26.8	8.6	3.0	chr21	33703642	33703772	(13006211)	+	L1ME4a	LINE/L1	5970	6108	(16)	2405489
309	29.2	7.0	12.9	chr21	33839079	33839503	(12870480)	C	L2a	LINE/L2	(1)	3425	3028	2405693
1728	20.8	8.8	2.5	chr21	35281667	35282101	(11427882)	+	MLT1C	LTR/ERVL-MaLR	2	466	(1)	2407884
583	28.1	2.3	1.2	chr21	35740514	35740686	(10969297)	C	MLT1J	LTR/ERVL-MaLR	(333)	179	5	2408570
321	32.6	4.8	1.4	chr21	36623935	36624074	(10085909)	C	LTR88c	LTR/Gypsy?	(697)	165	21	2410207
306	26.4	18.4	0.8	chr21	36802264	36802393	(9907590)	C	MLT1J2	LTR/ERVL-MaLR	(264)	184	27	2410482
385	31.1	6.8	4.8	chr21	36802439	36802668	(9907315)	C	MIRc	SINE/MIR	(17)	251	17	2410483
241	31.4	0.0	1.4	chr21	36910928	36910998	(9798985)	C	MamGypLTR3a	LTR/Gypsy	(433)	548	479	2410650
258	29.5	11.3	5.9	chr21	37159092	37159497	(9550486)	+	L2a	LINE/L2	2962	3425	(1)	2411100
3733	25.1	6.5	3.8	chr21	37348195	37349613	(9360370)	C	L1MEg	LINE/L1	(4218)	3332	795	2411435
474	31.9	3.7	0.3	chr21	37564796	37564960	(9145023)	C	MIRb	SINE/MIR	(92)	176	4	2411793
1562	17.9	5.3	2.7	chr21	38223659	38224025	(8485958)	C	L1MB8	LINE/L1	(1)	7037	6661	2412759
1516	20.3	5.0	3.9	chr21	38224043	38224444	(8485539)	C	LTR76	LTR/ERV1	(0)	675	214	2412760
9711	13.6	1.7	0.8	chr21	38227979	38229403	(8480580)	C	HERV3-int	LTR/ERV1	(6987)	1439	2	2412761
1428	21.9	5.0	3.9	chr21	38229404	38229805	(8480178)	C	LTR76	LTR/ERV1	(0)	675	214	2412761
1485	21.2	3.4	3.9	chr21	38747242	38747318	(7962665)	+	Tigger6b	DNA/TcMar-Tigger	1199	1272	(325)	2413433
2518	13.6	4.5	1.2	chr21	38747319	38747728	(7962255)	C	MSTA	LTR/ERVL-MaLR	(4)	424	1	2413434
461	25.3	14.2	2.4	chr21	39108788	39109034	(7600949)	+	MLT1J2	LTR/ERVL-MaLR	24	304	(144)	2414020
229	24.2	0.0	4.3	chr21	39610828	39610896	(7099087)	+	L2a	LINE/L2	3018	3083	(343)	2414893
414	26.1	9.5	2.5	chr21	41182539	41182695	(5527288)	+	MER4B-int	LTR/ERV1	6395	6563	(195)	2417086
9317	25.5	8.5	6.6	chr21	41182714	41186600	(5523383)	C	MER66-int	LTR/ERV1	(2709)	3967	1	2417085
2207	15.3	6.2	1.2	chr21	41228375	41228784	(5481199)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2417146
1060	27.7	19.6	2.2	chr21	41228785	41229142	(5480841)	C	MER20B	DNA/hAT-Charlie	(359)	424	2	2417145
10259	14.5	2.7	0.6	chr21	41333682	41335297	(5374686)	+	MSTA-int	LTR/ERVL-MaLR	1	1651	(0)	2417279
232	16.7	0.0	4.0	chr21	41550009	41550058	(5159925)	C	MER31B	LTR/ERV1	(56)	410	363	2417619
234	17.8	2.2	0.0	chr21	41550027	41550071	(5159912)	C	MER92B	LTR/ERV1	(46)	590	545	2417618
232	16.7	0.0	4.0	chr21	41550077	41550126	(5159857)	C	MER31B	LTR/ERV1	(56)	410	363	2417620
234	17.8	2.2	0.0	chr21	41550095	41550139	(5159844)	C	MER92B	LTR/ERV1	(46)	590	545	2417618
11818	9.5	0.4	1.4	chr21	41995116	41996711	(4713272)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2418280
1253	18.2	4.7	4.1	chr21	42037594	42037908	(4672075)	+	L1MB8	LINE/L1	5860	6176	(2)	2418350
220	17.9	8.2	0.0	chr21	42347930	42347985	(4361998)	+	MIR3	SINE/MIR	90	150	(58)	2418757
203	30.2	7.4	0.0	chr21	42405732	42405794	(4304189)	C	L2b	LINE/L2	(64)	3311	3244	2418833
2546	14.9	2.4	3.0	chr21	42481018	42481446	(4228537)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2418938
34842	11.6	3.3	2.9	chr21	42922766	42924948	(3785035)	C	HERVH48-int	LTR/ERV1	(4147)	2507	256	2419570
2051	28.4	3.8	7.7	chr21	43408081	43408662	(3301321)	+	L1ME1	LINE/L1	4778	5337	(842)	2420245
1960	13.6	2.0	1.7	chr21	43408663	43408957	(3301026)	+	AluJb	SINE/Alu	5	300	(12)	2420249
2749	13.7	0.2	5.8	chr21	43849308	43849788	(2860195)	C	MER41B	LTR/ERV1	(180)	454	1	2420921
2022	17.8	4.5	1.5	chr21	43903050	43903421	(2806562)	+	L1MB3	LINE/L1	5790	6175	(8)	2421015
6971	7.7	5.5	0.3	chr21	44282860	44283777	(2426206)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2421577
3575	12.4	1.3	2.4	chr21	44374331	44374865	(2335118)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2421671
164	30.6	2.3	1.1	chr21	44381380	44381624	(2328359)	+	(GATA)n	Simple_repeat	1	249	(0)	2421678
1014	23.3	1.5	1.0	chr21	44522938	44525437	(2184546)	+	(AGTC)n	Simple_repeat	1	2538	(0)	2421848
3025	29.2	7.9	8.7	chr21	44828950	44830047	(1879936)	+	L1MEf	LINE/L1	27	1223	(5416)	2422206
799	31.5	2.1	4.0	chr21	45004606	45004930	(1705053)	C	L1MB7	LINE/L1	(246)	5938	5619	2422397
2063	19.6	4.9	0.0	chr21	45004931	45005334	(1704649)	+	MSTB	LTR/ERVL-MaLR	1	425	(1)	2422398
1718	18.5	2.5	0.0	chr21	45111294	45111612	(1598371)	C	L1MC1	LINE/L1	(2)	6331	6005	2422537
2266	11.4	0.0	0.0	chr21	45400847	45401143	(1308840)	+	AluY	SINE/Alu	1	297	(14)	2422831
764	30.8	3.8	5.8	chr21	45401159	45401776	(1308207)	C	L1MEc	LINE/L1	(4919)	1589	985	2422826
406	15.9	6.5	2.2	chr21	45500063	45501126	(1208857)	+	(GT)n	Simple_repeat	1	1109	(0)	2422895
279	21.0	0.0	1.6	chr21	45556445	45556507	(1153476)	C	MER102c	DNA/hAT-Charlie	(196)	135	74	2422927
294	19.4	6.9	1.1	chr21	45591254	45592117	(1117866)	+	(CA)n	Simple_repeat	1	924	(0)	2422970
3273	17.6	2.8	8.0	chr21	45619448	45620175	(1089808)	C	LTR8	LTR/ERV1	(2)	689	1	2423008
11180	13.2	1.2	0.9	chr21	45964110	45965735	(744248)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	2423373
212	33.6	2.5	2.5	chr21	46029440	46029561	(680422)	+	MIR3	SINE/MIR	3	124	(84)	2423434
458	21.7	13.7	0.6	chr21	46029668	46029825	(680158)	+	L1MEi	LINE/L1	1339	1520	(692)	2423435
545	17.9	3.1	0.0	chr21	46063719	46063813	(646170)	C	MER57C2	LTR/ERV1	(287)	98	1	2423463
293	27.1	9.0	1.6	chr21	46299760	46299883	(410100)	+	MER115	DNA/hAT-Tip100	112	245	(448)	2423753
4462	9.1	4.2	3.2	chr21	46448533	46449316	(260667)	C	MER11A	LTR/ERVK	(0)	1266	316	2423965
13	12.6	0.0	3.6	chr21	46567393	46567420	(142563)	+	(TGG)n	Simple_repeat	1	28	(0)	2424140
561	26.3	9.9	3.2	chr21	46628446	46628749	(81234)	C	MLT1E1A	LTR/ERVL-MaLR	(210)	470	49	2424199
610	29.9	7.3	3.9	chr21	46628756	46629114	(80869)	+	LTR52	LTR/ERVL	35	406	(15)	2424200
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
922	26.9	5.7	8.8	chr22	15599628	15599919	(35218549)	+	L1ME4b	LINE/L1	3	142	(750)	2426571
29	2.5	0.0	6.5	chr22	16262324	16262369	(34556099)	+	(GATTCCATTC)n	Simple_repeat	1	46	(0)	2427195
29	2.5	0.0	6.5	chr22	16336632	16336677	(34481791)	+	(GATTCCATTC)n	Simple_repeat	1	46	(0)	2427221
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
14189	23.7	2.0	1.3	chr22	16375985	16377216	(34441252)	+	(GGAAT)n	Simple_repeat	2	1250	(0)	2427243
3286	14.2	1.4	4.9	chr22	16651289	16651902	(34166566)	C	LTR14B	LTR/ERVK	(0)	608	17	2427643
243	30.7	12.6	4.6	chr22	17268902	17269075	(33549393)	+	L3	LINE/CR1	3733	3922	(177)	2428609
13	15.5	9.3	0.0	chr22	17269109	17269151	(33549317)	+	(GCAGGT)n	Simple_repeat	1	47	(0)	2428610
183	27.5	9.9	3.2	chr22	18068357	18068450	(32750018)	C	L2c	LINE/L2	(560)	2859	2759	2430157
15	5.5	0.0	0.0	chr22	18068490	18068508	(32749960)	+	(CT)n	Simple_repeat	1	19	(0)	2430163
248	12.9	3.9	2.6	chr22	18891846	18892362	(31926106)	+	(TATAATA)n	Simple_repeat	1	537	(0)	2431165
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
2437	11.9	19.3	13.8	chr22	19316621	19316963	(31501505)	+	LTR76	LTR/ERV1	232	675	(0)	2431792
2647	15.0	3.7	8.0	chr22	19316967	19317023	(31501445)	C	L1MC2	LINE/L1	(370)	5974	5924	2431794
2286	12.2	0.0	0.0	chr22	19317024	19317327	(31501141)	+	AluSz	SINE/Alu	5	308	(4)	2431795
288	25.7	6.6	8.1	chr22	19604516	19604638	(31213830)	C	MIR	SINE/MIR	(77)	185	65	2432293
269	33.0	7.1	3.0	chr22	19789334	19789536	(31028932)	+	L1M7	LINE/L1	115	326	(5985)	2432543
1969	18.6	11.8	5.1	chr22	21940486	21940733	(28877735)	+	MLT1C	LTR/ERVL-MaLR	182	464	(3)	2436252
1724	16.8	0.3	5.1	chr22	21940898	21941213	(28877255)	C	AluJr	SINE/Alu	(11)	301	1	2436254
635	25.4	6.7	7.3	chr22	21998075	21998375	(28820093)	+	MER34	LTR/ERV1	1	502	(205)	2436337
221	28.4	1.9	8.1	chr22	22557441	22557551	(28260917)	C	MIRc	SINE/MIR	(120)	148	45	2437078
10658	7.1	6.4	0.7	chr22	23016097	23017584	(27800884)	C	LTR12C	LTR/ERV1	(0)	1579	2	2437657
4303	21.4	4.2	4.2	chr22	23228562	23229792	(27588676)	C	L1MEf	LINE/L1	(4676)	1957	727	2437979
2970	13.7	6.3	8.6	chr22	23928600	23929213	(26889255)	+	LTR14B	LTR/ERVK	10	608	(0)	2439223
6569	12.4	1.2	1.0	chr22	24630446	24631411	(26187057)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2440379
2253	11.0	0.3	1.3	chr22	25476184	25476491	(25341977)	C	AluSp	SINE/Alu	(8)	305	1	2442285
364	31.9	5.7	0.9	chr22	25735697	25735914	(25082554)	+	LTR33	LTR/ERVL	64	292	(223)	2442736
475	26.7	5.3	2.7	chr22	25735929	25736030	(25082438)	+	LTR33	LTR/ERVL	326	430	(85)	2442736
2124	17.5	3.3	3.5	chr22	25755536	25755892	(25062576)	+	MSTB	LTR/ERVL-MaLR	1	359	(67)	2442784
323	35.4	6.3	5.0	chr22	25766547	25766766	(25051702)	C	L2b	LINE/L2	(219)	3156	2934	2442809
2341	8.8	0.3	0.0	chr22	25944568	25944864	(24873604)	+	AluSx4	SINE/Alu	1	298	(12)	2443213
190	27.5	5.5	0.0	chr22	26000125	26000193	(24818275)	C	L2b	LINE/L2	(50)	3325	3253	2443354
237	22.0	1.7	1.7	chr22	26479792	26479851	(24338617)	C	L2b	LINE/L2	(0)	3375	3316	2444418
3250	15.6	3.2	0.2	chr22	26700089	26700601	(24117867)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	2444963
572	24.5	7.9	0.4	chr22	26817394	26817577	(24000891)	C	MIR	SINE/MIR	(58)	210	8	2445242
702	28.0	5.8	3.0	chr22	26817738	26817969	(24000499)	+	MIRb	SINE/MIR	22	260	(8)	2445243
755	28.9	4.4	5.0	chr22	27335182	27335313	(23483155)	+	MLT1I	LTR/ERVL-MaLR	132	264	(147)	2446487
17990	14.7	3.5	1.3	chr22	27359788	27361441	(23457027)	C	L1MC1	LINE/L1	(0)	6508	4817	2446528
339	34.9	2.3	3.0	chr22	27702373	27702505	(23115963)	+	MIRc	SINE/MIR	1	132	(136)	2447331
393	25.6	16.8	1.2	chr22	27975851	27976020	(22842448)	C	L1MEd	LINE/L1	(2923)	3223	3022	2447831
244	26.2	9.8	0.2	chr22	28019974	28020075	(22798393)	C	MIRc	SINE/MIR	(94)	174	60	2447873
422	26.7	1.6	0.8	chr22	28112971	28113091	(22705377)	+	MIRb	SINE/MIR	147	268	(0)	2447989
23851	6.4	0.7	0.3	chr22	28191324	28197439	(22621029)	+	L1PA4	LINE/L1	21	6155	(0)	2448114
518	19.1	0.0	0.0	chr22	28829377	28829481	(21988987)	C	Charlie18a	DNA/hAT-Charlie	(168)	174	70	2449317
13	23.5	3.3	4.8	chr22	29154521	29154580	(21663888)	+	(CCG)n	Simple_repeat	1	62	(0)	2449982
701	16.4	8.3	0.0	chr22	29154717	29154838	(21663630)	+	FLAM_A	SINE/Alu	1	133	(9)	2449983
3024	11.8	9.7	2.2	chr22	29168806	29169240	(21649228)	+	LTR45C	LTR/ERV1	2	483	(56)	2450020
2361	9.4	0.7	0.0	chr22	29169241	29169537	(21648931)	+	AluSx1	SINE/Alu	1	299	(13)	2450021
11	21.8	0.0	4.9	chr22	29233489	29233529	(21584939)	+	A-rich	Low_complexity	1	41	(0)	2450170
11	14.6	7.5	2.3	chr22	30387669	30387708	(20430760)	+	(GGAGCA)n	Simple_repeat	1	43	(0)	2452492
1386	20.9	4.5	0.0	chr22	30391005	30391319	(20427149)	C	ERVL-E-int	LTR/ERVL	(1161)	4506	4177	2452502
217	30.2	1.1	4.4	chr22	30445418	30445507	(20372961)	C	MIR	SINE/MIR	(2)	260	174	2452624
442	27.1	8.8	1.8	chr22	30445722	30445890	(20372578)	+	MIRb	SINE/MIR	87	268	(0)	2452625
12	17.6	0.0	5.6	chr22	30635629	30635664	(20182804)	+	G-rich	Low_complexity	1	36	(0)	2453063
31	6.0	0.0	6.7	chr22	30968842	30968901	(19849567)	+	(GCC)n	Simple_repeat	1	60	(0)	2453682
250	28.2	1.4	4.0	chr22	30970060	30970094	(19848374)	C	MIR3	SINE/MIR	(24)	184	152	2453686
336	22.7	4.9	14.0	chr22	30970095	30970273	(19848195)	+	Charlie4z	DNA/hAT-Charlie	4	165	(2)	2453687
13	20.5	2.6	0.0	chr22	30972668	30972706	(19845762)	+	(TTTTCTG)n	Simple_repeat	1	40	(0)	2453689
1237	16.9	2.2	1.8	chr22	30978674	30978896	(19839572)	+	MLT1K	LTR/ERVL-MaLR	372	595	(0)	2453693
1238	23.2	9.5	1.3	chr22	32127535	32127919	(18690549)	+	MER83B-int	LTR/ERV1	2892	3311	(1569)	2456421
533	10.1	0.0	0.0	chr22	32127926	32127994	(18690474)	+	MER41B	LTR/ERV1	566	634	(0)	2456422
789	22.1	10.0	0.0	chr22	33905380	33905614	(16912854)	C	Charlie2b	DNA/hAT-Charlie	(40)	2742	2482	2460024
896	25.1	9.7	12.2	chr22	33905627	33905847	(16912621)	C	Charlie2b	DNA/hAT-Charlie	(2332)	450	217	2460025
2286	10.2	0.0	0.0	chr22	33905848	33906142	(16912326)	+	AluSx1	SINE/Alu	1	295	(17)	2460026
244	24.3	1.3	2.6	chr22	33917939	33918014	(16900454)	C	UCON6	Unknown	(91)	346	272	2460043
751	29.7	5.8	0.4	chr22	35548169	35548398	(15270070)	+	MIR	SINE/MIR	7	249	(13)	2463272
2092	13.6	2.0	0.0	chr22	36406364	36406657	(14411811)	C	AluSx1	SINE/Alu	(12)	300	1	2464943
20	14.0	0.0	2.4	chr22	36406781	36406821	(14411647)	+	(TAA)n	Simple_repeat	1	41	(0)	2464944
28	3.3	0.0	0.0	chr22	37427363	37427393	(13391075)	+	(GTGTGA)n	Simple_repeat	1	31	(0)	2467204
14	28.6	5.1	1.2	chr22	37427395	37427435	(13391033)	+	(GCGTGT)n	Simple_repeat	1	80	(0)	2467205
16	23.3	0.0	0.0	chr22	37427436	37427470	(13390998)	+	(GT)n	Simple_repeat	1	35	(0)	2467206
17	20.6	4.0	0.0	chr22	37427473	37427522	(13390946)	+	(CGCCGC)n	Simple_repeat	1	52	(0)	2467207
2123	15.7	5.3	7.2	chr22	37883943	37884458	(12934010)	C	L1MB7	LINE/L1	(60)	6124	5619	2468314
19	8.3	0.0	0.0	chr22	38397518	38397543	(12420925)	+	(A)n	Simple_repeat	1	26	(0)	2469394
210	24.6	11.4	0.9	chr22	38452181	38452339	(12366129)	C	MIR1_Amn	SINE/MIR	(24)	206	22	2469531
3452	12.4	3.0	3.2	chr22	38683059	38683584	(12134884)	C	MER1A	DNA/hAT-Charlie	(4)	525	1	2470105
47	0.0	0.0	0.0	chr22	38805217	38805259	(12013209)	+	(AAAT)n	Simple_repeat	1	43	(0)	2470313
2116	12.3	0.0	1.9	chr22	38805260	38805281	(12013187)	+	AluSx	SINE/Alu	283	304	(8)	2470312
1439	24.2	5.0	5.2	chr22	38805282	38805673	(12012795)	C	MLT1D	LTR/ERVL-MaLR	(103)	402	18	2470311
2461	12.5	3.6	7.1	chr22	38984265	38984782	(11833686)	C	LTR61	LTR/ERV1	(0)	559	61	2470653
2675	24.9	11.7	4.2	chr22	40443301	40444180	(10374288)	+	L1MDa	LINE/L1	16	1059	(5574)	2473562
1915	18.6	9.2	1.3	chr22	40444182	40444633	(10373835)	+	L1MDa	LINE/L1	1377	1867	(4766)	2473562
261	32.3	9.5	4.2	chr22	40510585	40510843	(10307625)	C	L2c	LINE/L2	(6)	3381	3108	2473698
468	27.2	17.8	3.1	chr22	40654509	40654732	(10163736)	+	MIRc	SINE/MIR	1	264	(4)	2474021
1811	16.3	2.7	0.7	chr22	40655188	40655475	(10162993)	+	AluJb	SINE/Alu	1	294	(18)	2474023
762	29.7	8.2	3.8	chr22	41617839	41618082	(9200386)	+	L2a	LINE/L2	2935	3185	(241)	2476337
14	20.1	2.5	0.0	chr22	41969497	41969536	(8848932)	+	(GGCCTGG)n	Simple_repeat	1	41	(0)	2477175
237	29.5	13.2	0.9	chr22	43497303	43497415	(7321053)	C	MLT1K	LTR/ERVL-MaLR	(12)	583	455	2480348
9374	18.8	4.4	2.4	chr22	43702277	43706163	(7112305)	+	L1M3b	LINE/L1	1218	4869	(2693)	2480649
2221	12.3	0.0	0.7	chr22	44072435	44072742	(6745726)	C	AluSz	SINE/Alu	(6)	306	1	2481316
5470	19.4	3.1	2.3	chr22	44419357	44420522	(6397946)	C	L1MC3	LINE/L1	(1125)	6660	5486	2481923
461	28.2	14.5	8.6	chr22	45134379	45134855	(5683613)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	1	2483329
277	32.9	9.1	2.2	chr22	45261175	45261376	(5557092)	+	MIRc	SINE/MIR	13	221	(47)	2483563
14	11.1	3.5	0.0	chr22	45977172	45977200	(4841268)	+	(GCGA)n	Simple_repeat	1	30	(0)	2484822
25	20.8	5.1	1.2	chr22	45977219	45977297	(4841171)	+	(CCTC)n	Simple_repeat	1	83	(0)	2484823
2146	24.8	9.1	2.0	chr22	46009636	46010183	(4808285)	+	MLT1G	LTR/ERVL-MaLR	1	591	(0)	2484870
452	26.8	3.2	3.2	chr22	46055667	46055851	(4762617)	C	MER33	DNA/hAT-Charlie	(22)	302	118	2484965
17	3.4	6.2	2.9	chr22	46577385	46577416	(4241052)	+	(GCC)n	Simple_repeat	1	34	(0)	2485760
28	0.0	0.0	0.0	chr22	46587641	46587667	(4230801)	+	(GTCCT)n	Simple_repeat	1	27	(0)	2485774
522	29.1	2.3	1.7	chr22	47251254	47251428	(3567040)	+	MIR	SINE/MIR	76	251	(11)	2486596
425	26.2	2.4	1.6	chr22	47251447	47251570	(3566898)	C	MLT1B	LTR/ERVL-MaLR	(12)	378	254	2486597
1205	31.1	12.7	4.8	chr22	48131357	48132075	(2686393)	+	L2	LINE/L2	1761	2562	(857)	2487852
12	24.1	3.5	3.4	chr22	49020116	49020172	(1798296)	+	(CACCCT)n	Simple_repeat	1	59	(0)	2488889
428	26.4	10.1	0.8	chr22	49550886	49551011	(1267457)	C	MLT1H	LTR/ERVL-MaLR	(8)	541	403	2489507
281	26.1	9.1	0.8	chr22	49551085	49551215	(1267253)	C	MLT1H	LTR/ERVL-MaLR	(368)	181	39	2489507
312	27.8	1.0	1.6	chr22	49551255	49551365	(1267103)	+	L2a	LINE/L2	3217	3333	(93)	2489506
6919	13.5	3.7	0.3	chr22	49766981	49768136	(1050332)	C	L1M3f	LINE/L1	(4132)	1196	1	2489732
243	24.6	0.0	4.0	chr22	49832792	49832867	(985601)	C	L1MC4a	LINE/L1	(1283)	6599	6527	2489795
4935	14.0	3.7	2.9	chr22	49869816	49870864	(947604)	C	L1PA16	LINE/L1	(9)	6157	5113	2489879
1988	20.1	10.4	2.9	chr22	50204644	50205302	(613166)	+	L1MB1	LINE/L1	5490	6134	(49)	2490327
316	2.6	0.0	0.0	chr22	50643696	50643734	(174734)	C	LTR8	LTR/ERV1	(368)	323	285	2491012
282	2.6	0.0	9.3	chr22	50643735	50643777	(174691)	C	LTR8	LTR/ERV1	(368)	323	285	2491012
306	5.1	0.0	0.0	chr22	50643778	50643816	(174652)	C	LTR8	LTR/ERV1	(368)	323	285	2491012
341	0.0	0.0	0.0	chr22	50643817	50643855	(174613)	C	LTR8	LTR/ERV1	(368)	323	285	2491012
341	0.0	0.0	0.0	chr22	50643856	50643894	(174574)	C	LTR8	LTR/ERV1	(368)	323	285	2491012
316	2.6	0.0	0.0	chr22	50643895	50643933	(174535)	C	LTR8	LTR/ERV1	(368)	323	285	2491012
341	0.0	0.0	0.0	chr22	50643934	50643972	(174496)	C	LTR8	LTR/ERV1	(368)	323	285	2491012
255	3.2	0.0	0.0	chr22	50643985	50644015	(174453)	C	LTR8	LTR/ERV1	(376)	315	285	2491012
181	32.3	1.5	0.0	chr3	1275559	1275623	(197019936)	+	L2	LINE/L2	2276	2341	(1078)	2494195
1915	13.9	0.4	0.0	chr3	1275629	1275901	(197019658)	C	MER1A	DNA/hAT-Charlie	(194)	335	62	2494196
1654	9.8	0.0	0.0	chr3	4543538	4543742	(193751817)	C	AluSz	SINE/Alu	(107)	205	1	2499195
567	29.9	10.5	4.9	chr3	4543752	4544138	(193751421)	C	MLT1L	LTR/ERVL-MaLR	(4)	606	196	2499196
435	30.4	4.8	1.8	chr3	8629445	8629639	(189665920)	C	MIR3	SINE/MIR	(6)	202	2	2505702
3046	12.1	10.5	1.5	chr3	9080592	9081069	(189214490)	+	MER1A	DNA/hAT-Charlie	4	529	(0)	2506441
224	25.0	1.8	1.8	chr3	10388158	10388214	(187907345)	+	L2b	LINE/L2	3319	3375	(0)	2509306
381	29.0	7.9	6.1	chr3	11044203	11044301	(187251258)	C	MIRb	SINE/MIR	(15)	253	147	2510634
2212	14.4	8.7	0.0	chr3	11044302	11044690	(187250869)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2510635
633	30.0	6.4	7.2	chr3	11199367	11199714	(187095845)	+	L2b	LINE/L2	3020	3364	(11)	2510980
11606	8.6	1.4	1.0	chr3	11406935	11408503	(186887056)	C	THE1B-int	LTR/ERVL-MaLR	(4)	1576	1	2511411
8818	8.1	18.5	0.1	chr3	11510875	11512160	(186783399)	C	LTR12C	LTR/ERV1	(0)	1579	3	2511585
13	22.4	0.0	4.4	chr3	11719351	11719395	(186576164)	+	(GCCCC)n	Simple_repeat	1	45	(0)	2511932
1586	17.7	7.1	7.6	chr3	11774582	11774870	(186520689)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	54	2512077
13	13.2	0.0	0.0	chr3	12229248	12229272	(186066287)	+	(CCA)n	Simple_repeat	1	25	(0)	2512896
390	25.5	7.0	0.9	chr3	12299155	12299261	(185996298)	C	L2a	LINE/L2	(4)	3422	3309	2513026
3493	11.8	3.0	0.0	chr3	12562574	12563054	(185732505)	+	MER1A	DNA/hAT-Charlie	34	529	(0)	2513536
1077	17.7	0.0	0.6	chr3	12821251	12821415	(185474144)	+	AluSx	SINE/Alu	134	297	(15)	2514178
232	25.9	13.6	1.8	chr3	13599901	13600010	(184695549)	C	L2a	LINE/L2	(1096)	2323	2199	2515594
59	4.9	0.0	0.0	chr3	13600018	13600081	(184695478)	+	(AG)n	Simple_repeat	1	64	(0)	2515596
238	25.4	3.1	1.6	chr3	14124435	14124498	(184171061)	+	MIRc	SINE/MIR	88	152	(116)	2516338
10399	4.6	5.4	11.0	chr3	14293039	14294714	(184000845)	+	LTR12C	LTR/ERV1	3	1579	(0)	2516627
821	26.3	4.8	3.6	chr3	14905120	14905450	(183390109)	C	L1MCc	LINE/L1	(4704)	2333	1999	2517828
1393	26.7	7.3	5.2	chr3	14905449	14906231	(183389328)	C	L1MCc	LINE/L1	(5311)	1817	920	2517828
1235	25.2	11.4	3.9	chr3	15148622	15149136	(183146423)	+	MLT1G3	LTR/ERVL-MaLR	3	561	(34)	2518280
4506	7.0	3.8	0.2	chr3	15364053	15364635	(182930924)	+	LTR14B	LTR/ERVK	4	608	(0)	2518675
2144	9.9	0.0	0.0	chr3	15364636	15364907	(182930652)	C	AluSx1	SINE/Alu	(40)	272	1	2518676
1403	26.1	5.4	2.7	chr3	15417803	15418662	(182876897)	+	L1MCa	LINE/L1	597	1563	(5188)	2518797
2019	20.5	5.2	3.1	chr3	15838764	15839276	(182456283)	+	L1MB7	LINE/L1	6504	7034	(10)	2519480
204	35.8	6.0	2.7	chr3	15839323	15839434	(182456125)	+	L3b	LINE/CR1	4923	5038	(194)	2519483
422	16.2	2.4	0.0	chr3	16254165	16254244	(182041315)	C	MIRb	SINE/MIR	(8)	260	179	2520234
1223	25.0	7.9	2.1	chr3	18124561	18124940	(180170619)	+	MLT1I	LTR/ERVL-MaLR	1	404	(7)	2522912
180	40.0	2.6	0.0	chr3	18124943	18125092	(180170467)	C	L2c	LINE/L2	(704)	2715	2562	2522911
1004	29.1	4.7	7.0	chr3	19888926	19889365	(178406194)	+	HERVL40-int	LTR/ERVL	142	570	(4960)	2525248
1979	30.2	3.8	3.5	chr3	19889417	19889749	(178405810)	+	HERVL40-int	LTR/ERVL	567	892	(4638)	2525248
2109	10.2	7.5	0.0	chr3	23179214	23179496	(175116063)	C	AluSp	SINE/Alu	(6)	307	2	2529792
685	25.2	5.9	0.7	chr3	23179611	23179815	(175115744)	+	MIR	SINE/MIR	24	233	(29)	2529793
1166	24.3	9.9	3.8	chr3	23625147	23625514	(174670045)	C	MSTD	LTR/ERVL-MaLR	(3)	393	1	2530421
5235	25.2	8.4	10.1	chr3	23625515	23627281	(174668278)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	2	2530421
1637	16.9	1.3	7.1	chr3	23754561	23754886	(174540673)	C	AluJb	SINE/Alu	(4)	308	2	2530697
435	25.9	14.6	8.6	chr3	23869884	23870431	(174425128)	C	MLT1F1	LTR/ERVL-MaLR	(0)	591	1	2530923
719	27.8	7.8	0.0	chr3	25073397	25073619	(173221940)	+	MER103C	DNA/hAT-Charlie	8	249	(48)	2532839
393	26.3	19.8	0.0	chr3	25542780	25542969	(172752590)	C	MIR	SINE/MIR	(13)	249	13	2533475
345	25.4	11.6	3.0	chr3	28241156	28241289	(170054270)	+	L2a	LINE/L2	3279	3425	(1)	2537505
4349	7.5	3.5	0.8	chr3	30103712	30104303	(168191256)	C	LTR14B	LTR/ERVK	(0)	608	1	2540069
2082	7.7	1.7	18.2	chr3	32102178	32102590	(166192969)	+	LTR14A	LTR/ERVK	1	344	(0)	2543208
211	5.1	9.3	0.0	chr3	32195332	32195370	(166100189)	+	L3	LINE/CR1	1948	1990	(2109)	2543405
1183	26.3	11.7	2.6	chr3	32363167	32363592	(165931967)	C	MLT1J	LTR/ERVL-MaLR	(42)	470	1	2543736
9780	8.8	3.9	14.1	chr3	32902612	32904375	(165391184)	+	LTR12C	LTR/ERV1	3	1579	(0)	2544904
3753	11.4	1.9	3.0	chr3	37241698	37242231	(161053328)	C	MER1A	DNA/hAT-Charlie	(0)	529	2	2551251
400	30.5	4.7	0.0	chr3	40893967	40894130	(157401429)	+	MLT1H	LTR/ERVL-MaLR	420	591	(4)	2556729
494	25.9	1.3	0.0	chr3	41291568	41291714	(157003845)	+	L1ME3C	LINE/L1	5718	5866	(257)	2557278
476	21.0	6.5	5.4	chr3	41291713	41291826	(157003733)	+	L1ME3C	LINE/L1	6006	6121	(52)	2557278
2674	6.2	0.0	1.0	chr3	41291827	41292132	(157003427)	C	AluY	SINE/Alu	(8)	303	1	2557279
20107	10.9	7.3	0.8	chr3	41508002	41510879	(156784680)	+	L1PB1	LINE/L1	636	3753	(3109)	2557561
440	22.1	11.2	5.1	chr3	43044647	43044822	(155250737)	+	MER58B	DNA/hAT-Charlie	3	190	(151)	2560058
3211	12.2	5.6	8.2	chr3	43044823	43045431	(155250128)	C	LTR14B	LTR/ERVK	(0)	608	17	2560059
7434	8.2	0.8	0.2	chr3	43258305	43259266	(155036293)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2560374
186	34.5	6.3	3.2	chr3	43260474	43260596	(155034963)	+	L2c	LINE/L2	2723	2849	(570)	2560376
664	17.1	7.7	20.6	chr3	43260624	43260866	(155034693)	+	MER3	DNA/hAT-Charlie	1	209	(0)	2560377
1549	19.8	4.6	0.8	chr3	43798290	43798666	(154496893)	+	L1MDb	LINE/L1	959	1350	(5190)	2561184
17167	14.3	4.0	3.7	chr3	44768648	44773463	(153522096)	C	MER61-int	LTR/ERV1	(2105)	6015	193	2562645
328	20.4	5.1	3.1	chr3	44773503	44773598	(153521961)	C	LTR25-int	LTR/ERV1	(6657)	531	434	2562646
227	34.4	11.2	0.5	chr3	46695272	46695455	(151600104)	+	MIRc	SINE/MIR	9	214	(54)	2565799
398	20.6	3.8	2.7	chr3	47266697	47266822	(151028737)	C	MIRb	SINE/MIR	(15)	253	135	2566801
267	31.2	6.0	4.6	chr3	47619311	47619441	(150676118)	C	L2c	LINE/L2	(18)	3369	3237	2567556
13	21.1	2.6	0.0	chr3	48089099	48089136	(150206423)	+	(TGCGGCC)n	Simple_repeat	1	39	(0)	2568629
300	36.3	3.4	2.3	chr3	48507801	48507975	(149787584)	+	MLT1N2	LTR/ERVL-MaLR	353	529	(33)	2569471
1136	17.1	0.0	0.0	chr3	48623593	48623762	(149671797)	+	AluJb	SINE/Alu	132	301	(11)	2569630
47	2.2	0.0	0.0	chr3	49673796	49673842	(148621717)	+	(CTCACG)n	Simple_repeat	1	47	(0)	2571786
192	34.6	3.6	0.0	chr3	50415075	50415155	(147880404)	C	MIRc	SINE/MIR	(74)	194	111	2573009
8289	20.4	3.0	2.2	chr3	50912198	50914041	(147381518)	C	L1M1	LINE/L1	(5696)	1869	11	2573718
34151	6.4	0.7	0.8	chr3	51850620	51855457	(146440102)	+	HERV9N-int	LTR/ERV1	1	4741	(633)	2575062
372	31.1	5.7	2.6	chr3	51974749	51974900	(146320659)	C	MIR	SINE/MIR	(0)	262	106	2575246
827	31.5	13.2	9.2	chr3	52341872	52343131	(145952428)	C	L2a	LINE/L2	(50)	3376	2045	2575795
423	22.1	10.3	1.2	chr3	53785638	53785794	(144509765)	C	MIRb	SINE/MIR	(4)	258	93	2578082
263	35.0	3.3	4.8	chr3	53786077	53786325	(144509234)	+	UCON29	DNA/PiggyBac?	175	419	(20)	2578083
8735	2.5	0.0	0.0	chr3	53977514	53978481	(144317078)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2578337
215	23.0	1.9	0.0	chr3	56557717	56557774	(141737785)	+	L2a	LINE/L2	3328	3425	(1)	2582353
238	30.1	4.0	0.0	chr3	56557874	56557946	(141737613)	C	L2c	LINE/L2	(33)	3354	3279	2582354
10020	6.6	10.2	3.5	chr3	56718752	56720218	(141575341)	+	LTR12C	LTR/ERV1	3	1579	(0)	2582612
752	27.8	9.2	3.0	chr3	57020515	57020851	(141274708)	+	MLT1K	LTR/ERVL-MaLR	213	572	(23)	2583187
210	31.9	6.9	7.8	chr3	58526755	58526856	(139768703)	C	MIRb	SINE/MIR	(90)	178	78	2586176
190	36.2	9.4	0.0	chr3	58651500	58651615	(139643944)	+	L2b	LINE/L2	3239	3366	(9)	2586438
1942	24.8	1.5	2.9	chr3	59433033	59433690	(138861869)	+	L1M4b	LINE/L1	11	791	(6076)	2587515
1736	15.0	6.5	2.1	chr3	60780752	60781077	(137514482)	+	MER61A	LTR/ERV1	1	341	(0)	2589496
639	31.6	7.8	0.0	chr3	61118586	61118810	(137176749)	+	MIR	SINE/MIR	16	259	(3)	2590034
14	29.8	2.4	4.6	chr3	61561456	61561540	(136734019)	+	(CGCC)n	Simple_repeat	1	87	(0)	2590827
799	24.6	3.9	6.8	chr3	63234884	63235223	(135060336)	C	L1MD2	LINE/L1	(3)	6616	6287	2593690
381	24.6	1.7	3.3	chr3	64710900	64711021	(133584538)	+	MIRb	SINE/MIR	106	225	(43)	2596187
540	18.4	3.7	1.9	chr3	64711030	64711134	(133584425)	+	MER81	DNA/hAT-Blackjack	6	112	(2)	2596188
12	4.9	0.0	4.3	chr3	65701988	65702010	(132593549)	+	(TTAT)n	Simple_repeat	1	23	(0)	2597853
1753	18.3	4.4	0.6	chr3	65829297	65829647	(132465912)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	2598090
2322	12.8	3.3	0.0	chr3	67607653	67608004	(130687555)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2601077
854	22.5	1.1	0.5	chr3	69891414	69891601	(128403958)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2604987
369	27.0	2.6	0.9	chr3	69891645	69891756	(128403803)	+	MER103C	DNA/hAT-Charlie	92	205	(92)	2604988
229	29.9	3.1	4.9	chr3	71434672	71434833	(126860726)	+	L1ME3Cz	LINE/L1	790	948	(49)	2607226
878	18.3	1.1	8.8	chr3	71568430	71568621	(126726938)	+	MER45A	DNA/hAT-Tip100	1	177	(1)	2607435
1998	20.8	3.3	10.1	chr3	71590170	71590726	(126704833)	+	L1MC4a	LINE/L1	6536	7053	(829)	2607467
3704	12.8	0.0	0.2	chr3	71912472	71913001	(126382558)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2608059
30824	6.0	0.6	3.2	chr3	73154210	73159130	(125136429)	C	HERV9N-int	LTR/ERV1	(633)	4741	85	2610725
13736	7.2	1.7	0.1	chr3	75810139	75811997	(122483562)	C	HERVK14-int	LTR/ERVK	(4207)	1889	1	2614734
2011	7.4	17.4	0.0	chr3	75811998	75812281	(122483278)	C	LTR14A	LTR/ERVK	(0)	344	1	2614734
12	15.3	3.5	0.0	chr3	76632013	76632041	(121663518)	+	(TTCA)n	Simple_repeat	1	30	(0)	2615809
282	25.8	11.8	6.2	chr3	76632124	76632251	(121663308)	+	MIR3	SINE/MIR	11	146	(62)	2615810
329	21.8	0.0	0.0	chr3	76724260	76724314	(121571245)	+	AluYj4	SINE/Alu	228	282	(29)	2615942
1881	16.5	5.8	13.2	chr3	77366557	77367025	(120928534)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2616788
1608	23.3	2.5	1.7	chr3	77367026	77367079	(120928480)	+	MLT1A0	LTR/ERVL-MaLR	317	365	(0)	2616787
2019	13.5	4.0	5.9	chr3	77863264	77863650	(120431909)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	2617389
3245	23.0	3.0	0.1	chr3	83588261	83588914	(114706645)	C	L1MA5A	LINE/L1	(6104)	685	13	2624754
824	34.8	6.8	2.9	chr3	87230635	87231296	(111064263)	+	L2	LINE/L2	1814	2503	(916)	2629282
21861	9.4	1.0	0.2	chr3	89073987	89078067	(109217492)	+	L1PA7	LINE/L1	2040	6142	(12)	2631587
3957	17.4	3.8	0.6	chr3	95946608	95947488	(102348071)	C	L1MA6	LINE/L1	(2635)	4927	4019	2636107
2839	14.7	4.2	9.7	chr3	95947489	95948114	(102347445)	C	LTR14B	LTR/ERVK	(0)	608	19	2636109
1767	11.6	2.3	0.7	chr3	97071732	97072027	(101223532)	C	L1PB1	LINE/L1	(4)	6147	5847	2637361
4517	9.8	1.6	0.3	chr3	99776580	99777203	(98518356)	C	MER41B	LTR/ERV1	(0)	634	3	2640691
188	33.0	8.8	8.3	chr3	101310823	101311014	(96984545)	+	MamTip2	DNA/hAT-Tip100	8	200	(105)	2642850
695	23.0	7.4	1.1	chr3	101311016	101311219	(96984340)	+	L1M4b	LINE/L1	4	185	(6682)	2642851
5717	18.9	7.0	2.3	chr3	101311206	101313127	(96982432)	+	L1MB8	LINE/L1	4128	6177	(1)	2642852
3348	11.4	5.3	0.2	chr3	102071111	102071610	(96223949)	C	MER1A	DNA/hAT-Charlie	(0)	529	3	2644022
606	29.2	8.2	11.4	chr3	105500862	105501414	(92794145)	+	Tigger15a	DNA/TcMar-Tigger	19	552	(163)	2648357
1740	20.4	3.1	8.9	chr3	106256347	106256829	(92038730)	+	MER61-int	LTR/ERV1	19	472	(4745)	2649287
4750	12.9	6.7	2.0	chr3	107821979	107822847	(90472712)	C	MER49	LTR/ERV1	(10)	913	1	2651377
10612	11.0	3.8	0.1	chr3	110948508	110950028	(87345531)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2655914
2778	15.0	5.9	9.7	chr3	111054795	111055413	(87240146)	+	LTR14B	LTR/ERVK	15	608	(0)	2656027
354	33.9	4.6	0.0	chr3	112377552	112377675	(85917884)	C	MIRb	SINE/MIR	(32)	236	107	2657741
2248	15.6	2.7	0.2	chr3	112377759	112378151	(85917408)	+	MSTB1	LTR/ERVL-MaLR	30	432	(0)	2657742
624	26.4	10.8	8.4	chr3	112621054	112621566	(85673993)	+	MLT1H	LTR/ERVL-MaLR	1	527	(22)	2658093
20	25.1	3.1	5.0	chr3	113212133	113212230	(85083329)	+	G-rich	Low_complexity	1	101	(0)	2658909
15	13.7	7.5	0.0	chr3	113553587	113553626	(84741933)	+	A-rich	Low_complexity	1	43	(0)	2659364
2172	11.7	0.0	2.0	chr3	113553765	113554063	(84741496)	+	AluSq2	SINE/Alu	2	294	(19)	2659365
312	33.8	15.7	4.3	chr3	115648456	115649062	(82646497)	C	L2	LINE/L2	(841)	2578	1875	2662396
1393	25.3	10.9	1.0	chr3	120239661	120240071	(78055488)	C	MLT1F2	LTR/ERVL-MaLR	(103)	457	1	2668869
1162	15.4	0.6	0.5	chr3	120508011	120508220	(77787339)	+	MER50-int	LTR/ERV1	1004	1177	(3703)	2669260
6096	18.6	6.0	2.6	chr3	120508216	120509488	(77786071)	+	MER50-int	LTR/ERV1	3225	4543	(2662)	2669260
433	28.7	4.6	3.6	chr3	122532418	122532612	(75762947)	+	MamGypLTR2c	LTR/Gypsy	845	1041	(27)	2672154
710	32.5	11.9	3.1	chr3	122532647	122533554	(75762005)	C	L2c	LINE/L2	(153)	3234	2239	2672151
2206	14.0	9.3	1.8	chr3	122572926	122573324	(75722235)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2672239
3705	13.8	0.0	0.2	chr3	122629519	122630048	(75665511)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2672357
743	23.3	7.4	0.0	chr3	123630916	123631078	(74664481)	+	MER45A	DNA/hAT-Tip100	3	178	(0)	2674051
13	20.3	2.4	2.3	chr3	125595688	125595729	(72699830)	+	G-rich	Low_complexity	1	43	(0)	2677363
432	26.4	9.7	3.8	chr3	126518677	126518868	(71776691)	C	MIRb	SINE/MIR	(71)	197	2	2678714
3657	20.1	5.1	4.2	chr3	126518903	126519822	(71775737)	+	MER21C	LTR/ERVL	1	928	(10)	2678715
519	28.7	13.3	7.1	chr3	127424603	127424981	(70870578)	+	L2b	LINE/L2	2961	3366	(9)	2680009
16	17.6	3.5	5.1	chr3	127424985	127425041	(70870518)	+	GA-rich	Low_complexity	1	59	(0)	2680010
12	23.8	3.9	1.9	chr3	127425021	127425071	(70870488)	+	G-rich	Low_complexity	1	53	(0)	2680011
698	20.0	1.8	10.1	chr3	128007391	128007737	(70287822)	C	MER33	DNA/hAT-Charlie	(105)	219	41	2681040
764	28.4	7.0	4.6	chr3	128007751	128007998	(70287561)	C	L1M5	LINE/L1	(446)	5748	5491	2681041
632	28.8	2.4	8.4	chr3	128588913	128589193	(69706366)	+	MamRep4096	DNA/hAT-Tip100	78	336	(90)	2681994
6161	13.3	2.3	3.4	chr3	128589213	128590243	(69705316)	C	L1MC1	LINE/L1	(0)	6333	5305	2681996
14138	15.9	3.5	4.9	chr3	128857767	128859679	(69435880)	C	HERV3-int	LTR/ERV1	(6538)	1888	2	2682563
2833	13.0	5.8	1.5	chr3	128859680	128860156	(69435403)	C	LTR4	LTR/ERV1	(0)	596	98	2682563
3860	11.2	2.5	5.1	chr3	128920573	128921195	(69374364)	+	LTR14B	LTR/ERVK	3	608	(0)	2682687
1165	11.3	1.7	0.0	chr3	128921196	128921372	(69374187)	+	HERVK14-int	LTR/ERVK	1	180	(5916)	2682687
4116	11.0	0.7	6.5	chr3	128924747	128925079	(69370480)	+	LTR14B	LTR/ERVK	277	607	(1)	2682690
1410	20.1	7.2	6.3	chr3	128925081	128925114	(69370445)	+	L1MEg	LINE/L1	1028	1050	(5192)	2682685
2222	14.2	0.3	3.4	chr3	128925115	128925463	(69370096)	C	MER1B	DNA/hAT-Charlie	(1)	338	1	2682692
2148	22.5	10.6	1.6	chr3	128942011	128942664	(69352895)	C	MER77B	LTR/ERVL	(149)	782	1	2682729
3080	15.7	5.0	4.1	chr3	129756925	129757538	(68538021)	+	MER73	LTR/ERVL	1	623	(21)	2684342
35939	6.1	0.2	0.3	chr3	129902413	129906802	(68388757)	+	HERVK9-int	LTR/ERVK	1637	6021	(0)	2684629
22	13.0	0.0	0.0	chr3	131278542	131278575	(67016984)	+	(T)n	Simple_repeat	1	34	(0)	2686675
575	22.1	6.3	0.0	chr3	131278821	131278969	(67016590)	+	MER5A1	DNA/hAT-Charlie	1	159	(7)	2686676
661	18.6	17.0	3.1	chr3	133718593	133718753	(64576806)	C	MER5A	DNA/hAT-Charlie	(0)	189	2	2690433
15915	12.1	2.1	2.5	chr3	134040388	134042885	(64252674)	+	MER101-int	LTR/ERV1	409	2896	(3743)	2690839
275	25.5	13.4	0.0	chr3	134064408	134064503	(64231056)	C	MIR3	SINE/MIR	(25)	183	77	2690873
2238	16.5	6.0	3.6	chr3	134260917	134261337	(64034222)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2691158
4839	27.3	12.2	5.7	chr3	134261338	134261703	(64033856)	C	HAL1	LINE/L1	(2120)	387	4	2691153
2772	11.6	6.5	10.6	chr3	136457036	136457660	(61837899)	+	LTR14B	LTR/ERVK	11	608	(0)	2694432
889	23.7	7.2	13.6	chr3	136457662	136457813	(61837746)	+	L1MA4	LINE/L1	3021	3177	(4388)	2694433
1492	25.5	2.2	3.6	chr3	136695937	136696404	(61599155)	C	MER65C	LTR/ERV1	(0)	461	1	2694866
1357	16.1	6.2	2.7	chr3	136696405	136696690	(61598869)	+	L1MC1	LINE/L1	6013	6310	(23)	2694867
1795	18.1	2.7	5.5	chr3	138611371	138611544	(59684015)	C	L1MB4	LINE/L1	(1)	6179	6006	2697795
2316	17.2	2.8	2.8	chr3	138611545	138611975	(59683584)	+	MSTB1	LTR/ERVL-MaLR	1	431	(1)	2697796
306	28.5	10.5	0.0	chr3	139473256	139473392	(58822167)	+	Tigger12c	DNA/TcMar-Tigger	47	199	(535)	2699375
6309	22.2	1.6	2.1	chr3	144369176	144372056	(53923503)	+	L1PA13	LINE/L1	955	3753	(3013)	2706965
3673	11.2	1.7	1.0	chr3	146538942	146539464	(51756095)	C	MER1A	DNA/hAT-Charlie	(0)	529	3	2709698
2261	13.9	8.5	3.2	chr3	149857843	149858274	(48437285)	+	MSTB2	LTR/ERVL-MaLR	1	457	(0)	2714329
335	30.9	0.7	5.7	chr3	150202019	150202176	(48093383)	C	MLT1J	LTR/ERVL-MaLR	(252)	260	111	2714853
227	20.0	15.5	0.0	chr3	150202217	150202276	(48093283)	C	MLT1J	LTR/ERVL-MaLR	(539)	71	1	2714853
2112	9.3	0.0	0.0	chr3	152963734	152963990	(45331569)	C	AluSq2	SINE/Alu	(56)	257	1	2718929
490	23.4	21.9	5.9	chr3	152964020	152964292	(45331267)	C	MER21C	LTR/ERVL	(595)	343	15	2718930
1999	19.1	1.8	4.2	chr3	152992907	152993207	(45302352)	C	MLT2B3	LTR/ERVL	(252)	418	117	2718966
7242	25.8	6.6	2.4	chr3	153814483	153816128	(44479431)	+	L1ME2	LINE/L1	4094	5779	(558)	2720285
2482	14.3	5.2	2.7	chr3	153816129	153816573	(44478986)	+	MSTB2	LTR/ERVL-MaLR	1	457	(0)	2720288
6844	21.1	4.7	3.2	chr3	154941998	154944330	(43351229)	+	L1MA5A	LINE/L1	3112	5398	(2167)	2721803
4501	5.9	2.5	1.6	chr3	154944331	154944911	(43350648)	C	LTR14C	LTR/ERVK	(0)	587	1	2721805
9670	13.5	7.1	0.4	chr3	155051751	155053269	(43242290)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	2721970
2273	21.7	1.8	1.4	chr3	155861329	155861823	(42433736)	C	L1ME1	LINE/L1	(67)	6112	5616	2723166
4285	11.4	5.1	1.2	chr3	155953170	155953674	(42341885)	C	LTR8	LTR/ERV1	(0)	691	165	2723345
467	25.0	6.3	4.5	chr3	156318322	156318522	(41977037)	C	MER102a	DNA/hAT-Charlie	(1)	329	125	2723853
2420	10.7	1.0	0.0	chr3	156382203	156382511	(41913048)	+	AluSp	SINE/Alu	1	312	(1)	2723961
14	4.9	0.0	0.0	chr3	156382518	156382538	(41913021)	+	(AACC)n	Simple_repeat	1	21	(0)	2723962
589	31.2	11.5	0.8	chr3	156382562	156382926	(41912633)	+	MLT1I	LTR/ERVL-MaLR	1	409	(2)	2723963
406	24.3	1.9	1.0	chr3	156455856	156455959	(41839600)	C	MLT1L	LTR/ERVL-MaLR	(327)	283	179	2724066
316	35.3	3.8	1.3	chr3	156456027	156456191	(41839368)	C	MIRc	SINE/MIR	(29)	179	7	2724067
1038	26.1	13.9	2.3	chr3	156634782	156635461	(41660098)	+	L2a	LINE/L2	2649	3426	(0)	2724332
425	23.4	4.3	1.8	chr3	157903722	157903834	(40391725)	C	MLT1H2	LTR/ERVL-MaLR	(303)	186	71	2726099
2611	13.1	3.0	0.5	chr3	157903851	157904265	(40391294)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2726100
3004	12.3	0.1	7.6	chr3	158261535	158262067	(40033492)	+	MER1A	DNA/hAT-Charlie	35	463	(66)	2726563
6385	26.6	4.6	1.4	chr3	158262122	158264633	(40030926)	C	L1ME1	LINE/L1	(985)	5334	2690	2726557
13058	10.8	2.2	1.5	chr3	158500001	158504406	(39791153)	C	L1PBa1	LINE/L1	(2130)	4732	254	2726884
2657	6.5	13.8	0.3	chr3	159022112	159022556	(39273003)	+	LTR14B	LTR/ERVK	1	608	(0)	2727637
13854	13.7	2.2	4.2	chr3	159022558	159026946	(39268613)	C	L1PA16	LINE/L1	(1974)	4875	576	2727636
18586	9.2	1.1	0.7	chr3	160243755	160245169	(38050390)	+	L1PBa	LINE/L1	4286	5712	(1150)	2729508
1627	11.1	14.4	2.6	chr3	160245170	160245287	(38050272)	C	LTR14B	LTR/ERVK	(0)	608	477	2729512
45	4.1	0.0	0.0	chr3	160245288	160245338	(38050221)	+	(GGAGGCTGC)n	Simple_repeat	1	51	(0)	2729513
1627	11.7	12.3	5.8	chr3	160245339	160245620	(38049939)	C	LTR14B	LTR/ERVK	(132)	476	2	2729512
3558	12.5	1.7	0.8	chr3	160373450	160373973	(37921586)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2729695
7038	12.7	7.5	1.6	chr3	160459728	160460900	(37834659)	C	MER52C	LTR/ERV1	(0)	1278	32	2729811
2483	9.8	0.0	1.8	chr3	160460914	160461245	(37834314)	+	MER1A	DNA/hAT-Charlie	204	529	(0)	2729812
3829	12.0	1.0	5.1	chr3	163689139	163689770	(34605789)	+	LTR14B	LTR/ERVK	3	608	(0)	2734083
354	27.0	13.3	3.5	chr3	163689771	163689895	(34605664)	+	L1ME3	LINE/L1	3092	3217	(2929)	2734082
3115	12.1	6.6	8.9	chr3	165388247	165388855	(32906704)	C	LTR14B	LTR/ERVK	(0)	608	15	2736164
5417	23.2	6.5	6.7	chr3	167318888	167321201	(30974358)	+	L1MC4a	LINE/L1	5431	7882	(0)	2738540
367	21.9	4.7	0.0	chr3	168218279	168218360	(30077199)	C	MER115	DNA/hAT-Tip100	(602)	91	6	2739756
420	33.2	3.5	3.5	chr3	169172783	169172982	(29122577)	+	MIRc	SINE/MIR	68	267	(1)	2741018
443	31.3	0.7	0.7	chr3	169687917	169688064	(28607495)	+	MER5B	DNA/hAT-Charlie	3	150	(28)	2741672
2390	8.8	6.6	0.0	chr3	169813493	169813844	(28481715)	+	MER51B	LTR/ERV1	1	377	(0)	2741851
3239	11.7	0.0	10.0	chr3	169813845	169814480	(28481079)	C	LTR1A1	LTR/ERV1	(42)	795	205	2741850
2964	21.4	8.3	8.1	chr3	170787662	170787974	(27507585)	+	L1ME2z	LINE/L1	5321	5650	(794)	2743591
2137	19.7	4.6	8.0	chr3	170787975	170788498	(27507061)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	2743594
26	17.6	0.0	3.3	chr3	172039625	172039685	(26255874)	+	(GCG)n	Simple_repeat	1	61	(0)	2745520
13352	9.7	0.6	2.0	chr3	172568652	172569759	(25725800)	C	L1MA1	LINE/L1	(525)	5779	4690	2746313
2134	17.4	11.2	0.5	chr3	172569760	172570141	(25725418)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2746316
1917	10.9	10.7	7.3	chr3	172719014	172719432	(25576127)	+	LTR14B	LTR/ERVK	1	608	(0)	2746577
6222	7.6	1.2	1.3	chr3	172719433	172719967	(25575592)	+	HERVK14-int	LTR/ERVK	1	540	(5556)	2746577
2012	11.4	8.3	3.0	chr3	172724333	172724743	(25570816)	+	LTR14B	LTR/ERVK	1	607	(1)	2746582
14744	16.3	2.0	0.5	chr3	173215463	173217877	(25077682)	C	L1M1	LINE/L1	(5101)	2464	12	2747265
1757	21.0	10.1	7.0	chr3	175649938	175650520	(22645039)	+	L1MB8	LINE/L1	5575	6177	(1)	2750678
783	17.1	0.0	1.6	chr3	177130879	177131007	(21164552)	+	FLAM_A	SINE/Alu	1	127	(15)	2752631
1610	21.1	0.3	6.6	chr3	178399954	178400069	(19895490)	+	MLT1A0	LTR/ERVL-MaLR	23	138	(227)	2754634
2408	16.0	1.6	1.2	chr3	178400070	178400492	(19895067)	+	MSTB	LTR/ERVL-MaLR	1	425	(1)	2754635
638	21.6	5.8	4.1	chr3	179511847	179512015	(18783544)	+	MER3	DNA/hAT-Charlie	2	173	(36)	2756361
476	25.3	5.7	6.2	chr3	183517212	183517336	(14778223)	+	Charlie23a	DNA/hAT-Charlie	213	337	(2)	2762814
916	14.8	3.7	3.7	chr3	185475950	185476138	(12819421)	C	L1MB8	LINE/L1	(0)	6178	5990	2766449
18	0.0	0.0	0.0	chr3	185476357	185476376	(12819183)	+	(A)n	Simple_repeat	1	20	(0)	2766450
690	24.5	0.6	2.5	chr3	186371481	186371643	(11923916)	+	MER63B	DNA/hAT-Blackjack	274	433	(3)	2768233
264	23.8	1.6	0.0	chr3	186638476	186638538	(11657021)	C	MIRb	SINE/MIR	(187)	81	18	2768701
472	26.8	13.7	2.1	chr3	186998850	186999036	(11296523)	C	MIRb	SINE/MIR	(50)	218	7	2769404
469	14.4	4.9	0.0	chr3	188902651	188902747	(9392812)	+	L1MA7	LINE/L1	6189	6290	(1)	2772683
1647	24.4	12.8	3.5	chr3	190952624	190952696	(7342863)	+	L1ME1	LINE/L1	1812	1904	(4496)	2775879
4459	6.0	4.0	0.3	chr3	190952697	190953281	(7342278)	C	LTR14B	LTR/ERVK	(1)	607	1	2775884
10120	12.8	5.7	0.4	chr3	190979209	190980750	(7314809)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	2775912
1804	27.7	5.9	7.1	chr3	192552912	192553523	(5742036)	+	L1MEf	LINE/L1	1609	2199	(4216)	2778085
1018	30.8	3.3	1.9	chr3	192553503	192553910	(5741649)	+	L1MC1	LINE/L1	773	1454	(5199)	2778087
571	26.5	1.7	6.6	chr3	192553912	192554093	(5741466)	+	L1M3d	LINE/L1	186	358	(5533)	2778088
9577	15.9	2.0	0.7	chr3	193714032	193715399	(4580160)	+	MSTA-int	LTR/ERVL-MaLR	1	1395	(256)	2779882
27	17.6	6.2	3.9	chr3	194396424	194396520	(3899039)	+	GA-rich	Low_complexity	1	103	(0)	2781055
180	33.7	5.5	3.7	chr3	194768612	194768719	(3526840)	C	L2b	LINE/L2	(0)	3375	3266	2781815
9732	18.2	3.4	2.9	chr3	195409907	195410707	(2884852)	+	L1MB3	LINE/L1	4616	5449	(734)	2782865
1811	15.1	8.6	2.4	chr3	195410708	195411087	(2884472)	+	MLT1A1	LTR/ERVL-MaLR	1	406	(2)	2782869
848	17.3	4.9	0.6	chr3	195915338	195915483	(2380076)	+	AluJo	SINE/Alu	141	294	(18)	2783837
308	32.9	3.5	0.7	chr3	196144476	196144613	(2150946)	+	L2c	LINE/L2	3049	3190	(197)	2784334
887	7.4	0.0	0.0	chr3	196898634	196898741	(1396818)	+	AluY	SINE/Alu	2	109	(202)	2786008
43	23.8	4.6	1.9	chr3	196898752	196898904	(1396655)	+	(TTCGA)n	Simple_repeat	1	160	(0)	2786009
1566	6.3	0.0	0.5	chr3	196898905	196899096	(1396463)	+	AluY	SINE/Alu	109	299	(12)	2786008
5397	23.7	4.2	5.0	chr3	197246810	197248473	(1047086)	C	HERVIP10F-int	LTR/ERV1	(6038)	1565	1	2786575
15867	13.0	6.0	3.0	chr3	197564118	197564912	(730647)	+	MER4-int	LTR/ERV1	3881	4519	(2079)	2787133
1280	26.3	12.2	2.3	chr3	197730138	197730573	(564986)	+	MLT1K	LTR/ERVL-MaLR	19	503	(92)	2787415
2235	3.4	0.0	0.8	chr3	197730584	197730848	(564711)	C	LTR14A	LTR/ERVK	(78)	266	4	2787416
938	26.9	7.4	2.2	chr4	73646	74014	(190140541)	+	MER21C	LTR/ERVL	506	895	(43)	2788596
11590	10.1	0.5	1.8	chr4	202358	203838	(190010717)	+	THE1B-int	LTR/ERVL-MaLR	2	1463	(117)	2788760
9206	7.3	19.5	0.2	chr4	403252	404523	(189810032)	C	LTR12C	LTR/ERV1	(0)	1579	3	2789054
2622	26.2	12.2	1.4	chr4	1486343	1486950	(188727605)	+	L2a	LINE/L2	1944	2630	(789)	2790242
291	28.9	13.3	1.3	chr4	1579509	1579666	(188634889)	+	MIRb	SINE/MIR	20	199	(69)	2790315
11	9.5	11.8	0.0	chr4	2073332	2073365	(188141190)	+	(CCCTCAC)n	Simple_repeat	1	38	(0)	2791054
350	32.7	4.3	10.4	chr4	2868602	2868898	(187345657)	C	L2c	LINE/L2	(12)	3375	3098	2792367
1320	24.4	15.3	1.1	chr4	3297714	3298354	(186916201)	C	HAL1	LINE/L1	(611)	1896	1148	2793034
4393	14.2	4.5	3.2	chr4	4639688	4640198	(185574357)	+	L1MB3	LINE/L1	5619	6141	(42)	2795128
201	31.9	1.4	0.0	chr4	4641562	4641633	(185572922)	C	MIR	SINE/MIR	(123)	139	67	2795133
18	25.1	1.5	3.0	chr4	5578603	5578689	(184635866)	+	(TGGA)n	Simple_repeat	1	85	(0)	2796782
425	31.4	12.7	2.2	chr4	5578731	5579081	(184635474)	C	L2c	LINE/L2	(51)	3336	2941	2796783
183	13.5	0.0	25.7	chr4	5776464	5776533	(184438022)	+	MIRc	SINE/MIR	83	134	(134)	2797150
1769	31.0	4.2	8.0	chr4	5776534	5777684	(184436871)	C	L1ME3B	LINE/L1	(4964)	1278	173	2797148
2553	5.1	0.0	0.3	chr4	6185366	6185659	(184028896)	+	AluY	SINE/Alu	1	293	(18)	2797900
635	26.7	2.7	3.2	chr4	6185660	6185780	(184028775)	C	MER5A	DNA/hAT-Charlie	(62)	127	2	2797899
2306	19.3	2.9	0.2	chr4	6722630	6723092	(183491463)	C	L1MB3	LINE/L1	(0)	6183	5708	2798944
794	24.3	3.1	14.6	chr4	8678914	8679262	(181535293)	C	L1MC	LINE/L1	(820)	5326	4988	2802136
5425	12.1	4.5	0.2	chr4	9571270	9571920	(180642635)	+	L1PB1	LINE/L1	5491	6150	(1)	2803229
3430	17.6	3.8	2.5	chr4	10302085	10302983	(179911572)	C	HERVK9-int	LTR/ERVK	(5342)	679	1	2804317
3287	12.2	1.6	0.6	chr4	10302984	10303470	(179911085)	C	MER9B	LTR/ERVK	(0)	499	8	2804317
1453	20.0	3.3	0.3	chr4	11191389	11191709	(179022846)	C	L1MA9	LINE/L1	(36)	6276	5946	2805778
163	5.5	2.6	1.7	chr4	11191714	11191947	(179022608)	+	(TTTC)n	Simple_repeat	1	240	(0)	2805779
229	30.8	4.0	2.4	chr4	17681032	17681154	(172533401)	C	MIRc	SINE/MIR	(14)	254	130	2816713
190	32.0	9.4	1.6	chr4	17681281	17681407	(172533148)	C	MIR1_Amn	SINE/MIR	(92)	138	1	2816714
646	29.9	7.8	8.4	chr4	25093020	25093509	(165121046)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	124	2828287
849	17.8	0.0	0.0	chr4	25223697	25223831	(164990724)	+	FLAM_C	SINE/Alu	1	135	(8)	2828528
914	20.6	0.0	2.7	chr4	25223832	25223883	(164990672)	+	AluJr	SINE/Alu	122	173	(139)	2828529
3505	12.0	5.9	10.9	chr4	25223884	25224596	(164989959)	C	LTR76	LTR/ERV1	(0)	675	1	2828530
1134	15.2	0.0	11.4	chr4	25490772	25490898	(164723657)	+	L1PA15	LINE/L1	6047	6163	(2)	2829009
1095	10.3	8.9	3.0	chr4	25490937	25491137	(164723418)	+	L1PA16	LINE/L1	5952	6165	(1)	2829012
2467	13.8	8.9	0.3	chr4	26314417	26314807	(163899748)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2830839
568	27.2	16.6	2.8	chr4	26314808	26314865	(163899690)	C	L1ME4b	LINE/L1	(571)	321	265	2830838
555	33.3	8.5	2.8	chr4	26988141	26988453	(163226102)	C	L2c	LINE/L2	(45)	3381	3031	2831922
1998	7.3	1.2	18.1	chr4	27662390	27662804	(162551751)	+	LTR14A	LTR/ERVK	1	344	(0)	2832932
10389	11.4	3.3	0.0	chr4	31198967	31200494	(159014061)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2837747
3973	11.3	0.5	4.9	chr4	33516510	33517140	(156697415)	C	LTR14B	LTR/ERVK	(0)	608	6	2840884
728	24.9	21.1	3.0	chr4	37653621	37654050	(152560505)	+	MLT1G3	LTR/ERVL-MaLR	24	577	(2)	2846431
14	11.7	8.1	0.0	chr4	37826624	37826660	(152387895)	+	(CTCCGC)n	Simple_repeat	1	40	(0)	2846764
3277	22.9	14.8	4.3	chr4	38303005	38303987	(151910568)	C	MER52A	LTR/ERV1	(650)	1105	1	2847552
13	19.6	0.0	0.0	chr4	39365944	39365973	(150848582)	+	(CCTT)n	Simple_repeat	1	30	(0)	2849468
3336	11.7	5.3	1.0	chr4	40007329	40007830	(150206725)	C	MER1A	DNA/hAT-Charlie	(4)	525	1	2851016
236	32.5	10.7	1.7	chr4	42481391	42481509	(147733046)	C	MIR3	SINE/MIR	(27)	181	51	2855696
311	22.9	4.7	9.6	chr4	42481700	42481834	(147732721)	+	Charlie4z	DNA/hAT-Charlie	21	148	(19)	2855697
2316	8.5	0.3	8.3	chr4	43472457	43472828	(146741727)	+	LTR14A	LTR/ERVK	1	342	(2)	2857020
18789	16.4	3.5	0.9	chr4	43472831	43477399	(146737156)	C	L1M1	LINE/L1	(2864)	4701	13	2857022
2794	13.3	7.1	9.5	chr4	45640290	45640897	(144573658)	+	LTR14B	LTR/ERVK	17	608	(0)	2859791
2546	10.4	0.0	0.0	chr4	48181393	48181700	(142032855)	+	AluSg	SINE/Alu	1	308	(2)	2863423
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
5006	13.5	1.2	2.1	chr4	49156630	49157532	(141057023)	C	L1M1	LINE/L1	(1480)	4666	3772	2864890
71	10.6	0.9	0.9	chr4	49284287	49284400	(140930155)	+	(GAAG)n	Simple_repeat	1	115	(0)	2865060
1890	11.5	6.2	0.0	chr4	49511313	49511599	(140702956)	+	L1PA10	LINE/L1	5863	6168	(0)	2865177
14	13.6	0.0	5.6	chr4	49511602	49511637	(140702918)	+	A-rich	Low_complexity	1	36	(0)	2865178
5309	24.9	3.8	0.8	chr4	49574691	49575992	(140638563)	+	MSTA-int	LTR/ERVL-MaLR	28	1369	(262)	2865278
2651	10.8	5.1	3.1	chr4	54921368	54921786	(135292769)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2870103
3762	14.5	6.3	4.1	chr4	55564824	55565295	(134649260)	+	LTR8A	LTR/ERV1	1	473	(254)	2871118
11846	9.0	0.5	1.9	chr4	56827328	56828431	(133386124)	+	THE1A-int	LTR/ERVL-MaLR	498	1577	(3)	2873383
3795	9.4	3.6	5.0	chr4	63521085	63521699	(126692856)	+	LTR14B	LTR/ERVK	3	608	(0)	2882094
9752	18.8	3.0	3.3	chr4	63521700	63522141	(126692414)	+	L1MCa	LINE/L1	4714	5146	(1175)	2882090
2060	14.6	3.5	0.6	chr4	67659275	67659633	(122554922)	+	THE1D	LTR/ERVL-MaLR	1	370	(11)	2887276
5975	13.4	1.7	1.1	chr4	68281479	68282426	(121932129)	C	LTR5_Hs	LTR/ERVK	(14)	954	1	2888128
11910	10.3	1.5	2.2	chr4	73544153	73547515	(116667040)	+	L1P3	LINE/L1	1	3378	(3083)	2895045
3527	11.2	2.1	3.2	chr4	74843878	74844412	(115370143)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	2896757
2327	12.5	0.0	0.0	chr4	75745619	75745929	(114468626)	+	AluSx	SINE/Alu	2	312	(0)	2897995
431	30.1	8.0	6.2	chr4	75745979	75746417	(114468138)	C	MLT1J	LTR/ERVL-MaLR	(49)	463	16	2897996
1237	18.0	15.4	0.8	chr4	75882538	75882792	(114331763)	C	AluJr4	SINE/Alu	(13)	299	1	2898301
44103	4.2	1.0	1.9	chr4	76044458	76049791	(114164764)	C	HERV9NC-int	LTR/ERV1	(834)	5284	1	2898617
994	25.5	12.6	14.1	chr4	76220843	76221335	(113993220)	+	LTR105_Mam	LTR/ERVL	13	513	(87)	2898922
5130	11.7	1.3	0.4	chr4	76225298	76226055	(113988500)	C	L1PB1	LINE/L1	(1896)	4966	4202	2898931
3268	13.1	3.5	9.3	chr4	76226056	76226687	(113987868)	C	LTR14B	LTR/ERVK	(0)	608	15	2898932
10455	7.7	10.6	0.1	chr4	77466204	77467614	(112746941)	+	LTR12C	LTR/ERV1	3	1579	(0)	2900751
16	4.5	0.0	0.0	chr4	77994798	77994820	(112219735)	+	(AACA)n	Simple_repeat	1	23	(0)	2901533
13	19.2	0.0	0.0	chr4	77994821	77994827	(112219728)	+	(AACC)n	Simple_repeat	1	30	(0)	2901534
448	9.8	7.5	5.4	chr4	78418468	78418559	(111795996)	+	AluJr	SINE/Alu	203	296	(16)	2902120
332	28.8	2.3	11.3	chr4	79830293	79830531	(110384024)	+	L2a	LINE/L2	3209	3425	(1)	2904070
9441	8.0	12.1	0.3	chr4	80302656	80304045	(109910510)	+	LTR12C	LTR/ERV1	3	1579	(0)	2904664
1907	24.0	4.8	1.6	chr4	85014572	85015016	(105199539)	+	LTR16B	LTR/ERVL	4	463	(0)	2911986
1045	25.0	10.8	6.2	chr4	85170739	85171341	(105043214)	+	L1ME3E	LINE/L1	5473	6118	(125)	2912195
332	34.4	0.0	0.0	chr4	86389587	86389676	(103824879)	+	MER20B	DNA/hAT-Charlie	114	203	(580)	2913767
472	30.4	3.7	3.7	chr4	86389698	86389912	(103824643)	+	MER20B	DNA/hAT-Charlie	291	505	(278)	2913768
2155	17.2	7.7	0.5	chr4	86834026	86834422	(103380133)	+	MSTB1	LTR/ERVL-MaLR	5	432	(0)	2914428
1971	11.7	10.4	4.2	chr4	87402106	87402513	(102812042)	C	LTR14B	LTR/ERVK	(0)	608	1	2915452
42000	6.5	2.3	0.4	chr4	87402711	87408386	(102806169)	C	HERVK14-int	LTR/ERVK	(199)	5897	1	2915453
2084	9.7	10.2	4.2	chr4	87408387	87408795	(102805760)	C	LTR14B	LTR/ERVK	(0)	608	1	2915453
11001	9.8	0.6	6.1	chr4	87724723	87726386	(102488169)	+	THE1B-int	LTR/ERVL-MaLR	1	1572	(8)	2915972
1007	26.2	15.1	2.1	chr4	88083879	88084303	(102130252)	C	LTR16E1	LTR/ERVL	(1)	537	48	2916513
10772	6.8	4.6	10.3	chr4	88312032	88313710	(101900845)	C	LTR12C	LTR/ERV1	(0)	1579	2	2916935
826	29.4	10.8	6.0	chr4	88483923	88484994	(101729561)	C	L1MEd	LINE/L1	(5050)	1192	18	2917257
10526	13.0	1.6	2.0	chr4	89036014	89037649	(101176906)	+	MSTA-int	LTR/ERVL-MaLR	3	1631	(0)	2918037
595	14.8	0.0	0.0	chr4	89108107	89108194	(101106361)	+	HERVL18-int	LTR/ERVL	5960	6047	(0)	2918125
767	27.0	5.2	1.0	chr4	89108196	89108397	(101106158)	+	LTR18A	LTR/ERVL	1	211	(146)	2918125
421	22.5	4.4	12.7	chr4	89108384	89108553	(101106002)	+	LTR18A	LTR/ERVL	351	500	(114)	2918125
19	14.8	0.0	2.5	chr4	89308014	89308053	(100906502)	+	(GGC)n	Simple_repeat	1	40	(0)	2918455
6528	21.2	2.4	2.0	chr4	90569374	90571767	(99642788)	+	L1PA17	LINE/L1	83	1703	(5232)	2920118
20097	14.9	3.0	1.3	chr4	90795318	90800116	(99414439)	C	L1PA13	LINE/L1	(1822)	4944	41	2920395
190	35.9	10.9	4.3	chr4	94914525	94914806	(95299749)	C	L2b	LINE/L2	(2291)	1128	826	2925746
1273	19.5	0.4	0.9	chr4	95257204	95257429	(94957126)	+	AluJb	SINE/Alu	84	308	(4)	2926178
3013	11.6	12.3	0.0	chr4	95324110	95324573	(94889982)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	2926286
2141	13.9	0.0	0.0	chr4	97769931	97770231	(92444324)	+	AluSx1	SINE/Alu	3	303	(9)	2929321
1113	28.4	15.6	5.8	chr4	97770232	97771022	(92443533)	C	L2a	LINE/L2	(174)	3252	2337	2929320
2604	10.7	6.8	7.7	chr4	99801090	99801711	(90412844)	C	MER4B	LTR/ERV1	(0)	900	4	2932134
228	32.5	2.4	3.1	chr4	101293037	101293163	(88921392)	+	Tigger16b	DNA/TcMar-Tigger	148	273	(63)	2934162
33808	6.1	0.5	0.0	chr4	102235770	102239844	(87974711)	+	HERV9NC-int	LTR/ERV1	59	4153	(1965)	2935409
469	17.7	22.0	0.0	chr4	102312016	102312139	(87902416)	C	MIR	SINE/MIR	(25)	237	79	2935502
399	30.2	12.1	1.5	chr4	102312141	102312399	(87902156)	C	Tigger20a	DNA/TcMar-Tigger	(157)	816	527	2935503
2389	16.2	4.2	1.2	chr4	105718185	105718597	(84495958)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2939899
9446	12.2	6.8	1.1	chr4	106131638	106133127	(84081428)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2940407
1245	20.1	2.0	0.7	chr4	106397081	106397371	(83817184)	+	L1M4c	LINE/L1	1010	1304	(5080)	2940776
1915	22.7	7.5	3.1	chr4	106397335	106397820	(83816735)	C	L1M4c	LINE/L1	(5858)	526	18	2940774
2499	7.3	10.2	1.7	chr4	107328005	107328454	(82886101)	+	LTR14B	LTR/ERVK	1	608	(0)	2941935
42716	5.7	1.0	0.4	chr4	107328455	107333874	(82880681)	+	HERVK14-int	LTR/ERVK	1	5465	(631)	2941935
2316	8.7	13.8	0.8	chr4	107334346	107334793	(82879762)	+	LTR14B	LTR/ERVK	1	608	(0)	2941937
3413	9.6	2.7	0.0	chr4	107379534	107380032	(82834523)	+	LTR10D	LTR/ERV1	1	513	(0)	2942003
368	33.1	2.4	0.0	chr4	107511703	107511823	(82702732)	C	MIRb	SINE/MIR	(1)	267	144	2942172
1323	20.3	5.2	4.8	chr4	107678395	107678793	(82535762)	+	L1MCc	LINE/L1	69	469	(5954)	2942369
1347	27.2	8.2	1.9	chr4	109774121	109774658	(80439897)	C	L2a	LINE/L2	(8)	3418	2844	2945524
23	34.0	0.0	0.0	chr4	110586223	110586295	(79628260)	+	GA-rich	Low_complexity	1	73	(0)	2946835
1095	25.3	13.0	2.0	chr4	111690603	111690897	(78523658)	+	LTR16B	LTR/ERVL	1	332	(131)	2948120
3066	12.7	2.6	1.2	chr4	112287056	112287550	(77927005)	C	MER1A	DNA/hAT-Charlie	(27)	502	1	2948983
2230	20.0	4.3	1.1	chr4	112473487	112474008	(77740547)	+	MER74A	LTR/ERVL	20	558	(0)	2949234
5384	13.8	0.3	1.0	chr4	112493061	112493567	(77720988)	+	L1PA16	LINE/L1	5654	6155	(11)	2949249
10378	10.7	4.3	0.7	chr4	113984685	113986207	(76228348)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2951533
15386	19.5	2.4	1.6	chr4	114251554	114258231	(75956324)	+	L1PA17	LINE/L1	343	6919	(16)	2951855
3819	10.4	2.3	0.2	chr4	119636656	119637173	(70577382)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2958757
3201	10.4	9.4	0.0	chr4	122065739	122066217	(68148338)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2962026
3251	12.3	7.8	0.2	chr4	122556425	122556913	(67657642)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2962635
3808	21.4	10.5	10.9	chr4	123005729	123007402	(67207153)	C	L1MEc	LINE/L1	(4287)	2113	447	2963333
1940	14.1	5.0	1.6	chr4	124137393	124137760	(66076795)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2964917
1786	18.2	7.7	1.7	chr4	124137761	124138549	(66076006)	+	L1PB4	LINE/L1	5261	6156	(0)	2964916
3562	19.2	5.9	7.1	chr4	124140577	124141725	(66072830)	+	L1M1	LINE/L1	3388	4516	(3043)	2964923
34462	6.4	0.8	0.5	chr4	127271936	127276305	(62938250)	C	HERVK9-int	LTR/ERVK	(0)	6021	1638	2968863
3327	13.1	4.0	0.2	chr4	128132693	128133175	(62081380)	C	MER1A	DNA/hAT-Charlie	(0)	529	28	2970242
5847	11.9	14.3	2.5	chr4	128265256	128266341	(61948214)	C	MER11B	LTR/ERVK	(0)	1236	1	2970459
4685	6.0	0.8	0.0	chr4	129080873	129081454	(61133101)	+	LTR14C	LTR/ERVK	1	587	(0)	2971728
2092	12.2	11.9	2.6	chr4	129081455	129081745	(61132810)	C	MSTA	LTR/ERVL-MaLR	(89)	339	1	2971727
928	21.4	6.5	13.1	chr4	131809946	131810459	(58404096)	C	MER61-int	LTR/ERV1	(6205)	886	195	2975076
917	21.5	4.8	9.5	chr4	139214206	139214488	(51000067)	C	MLT1B	LTR/ERVL-MaLR	(121)	269	1	2984188
2366	10.8	0.0	0.0	chr4	139433094	139433390	(50781165)	C	AluSx	SINE/Alu	(15)	297	1	2984630
3370	17.1	0.7	1.7	chr4	139433418	139433491	(50781064)	C	L1M1	LINE/L1	(6955)	610	539	2984627
2526	7.3	0.0	0.0	chr4	139433492	139433792	(50780763)	+	AluSg7	SINE/Alu	1	301	(8)	2984631
317	34.1	2.1	1.4	chr4	139764482	139764621	(50449934)	+	MIRc	SINE/MIR	88	228	(40)	2985215
1751	16.6	0.6	3.3	chr4	139876009	139876339	(50338216)	+	MER33	DNA/hAT-Charlie	3	324	(0)	2985388
12	16.8	0.0	5.4	chr4	141220665	141220701	(48993854)	+	(TTCCTT)n	Simple_repeat	1	37	(0)	2987428
3265	12.2	6.8	0.4	chr4	142055750	142056244	(48158311)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2988454
778	28.7	1.4	3.7	chr4	147984252	147984548	(42230007)	C	L1PA17	LINE/L1	(6003)	870	581	2996541
5616	20.6	2.1	0.9	chr4	147984615	147986120	(42228435)	C	L1PA15-16	LINE/L1	(5434)	1715	3	2996548
261	24.7	7.9	2.1	chr4	148109305	148109399	(42105156)	+	L2a	LINE/L2	3326	3426	(0)	2996701
1863	16.1	5.6	5.8	chr4	148482417	148482792	(41731763)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2997192
2927	11.2	0.1	0.0	chr4	148482793	148483181	(41731374)	+	MER1A	DNA/hAT-Charlie	99	529	(0)	2997193
2213	13.9	0.3	0.3	chr4	152306038	152306340	(37908215)	C	AluJb	SINE/Alu	(9)	303	1	3002802
2965	22.5	4.0	5.3	chr4	153047502	153048041	(37166514)	C	L1ME3	LINE/L1	(253)	5909	5343	3003934
989	13.6	0.0	0.0	chr4	153048042	153048188	(37166367)	+	MSTB2	LTR/ERVL-MaLR	1	147	(310)	3003936
5583	11.8	2.4	0.9	chr4	153048190	153049046	(37165509)	C	L1PA16	LINE/L1	(0)	6166	5297	3003937
779	25.3	3.2	0.0	chr4	153206127	153206308	(37008247)	C	MER21C	LTR/ERVL	(105)	833	646	3004227
3866	6.9	1.0	0.2	chr4	153688368	153688872	(36525683)	C	MER9a3	LTR/ERVK	(0)	512	4	3005064
33703	5.8	0.3	0.2	chr4	153688875	153693253	(36521302)	C	HERVK9-int	LTR/ERVK	(0)	6021	1638	3005064
4579	26.2	10.6	11.6	chr4	156732193	156733488	(33481067)	+	L1MDa	LINE/L1	1005	2397	(4236)	3009180
2506	9.5	2.1	2.9	chr4	156838728	156838836	(33375719)	+	THE1C	LTR/ERVL-MaLR	1	107	(268)	3009317
2015	7.3	0.3	23.3	chr4	156838837	156839283	(33375272)	C	LTR14A	LTR/ERVK	(0)	344	1	3009318
1033	20.6	14.2	11.8	chr4	166568646	166569042	(23645513)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	3022528
2563	24.2	15.8	3.2	chr4	166569043	166569410	(23645145)	C	L1MC4a	LINE/L1	(539)	7343	6870	3022527
66	0.0	0.0	0.0	chr4	168816818	168816873	(21397682)	+	(GT)n	Simple_repeat	1	56	(0)	3025384
9547	19.9	3.9	3.8	chr4	168930523	168934109	(21280446)	+	L1M2c	LINE/L1	780	4403	(3162)	3025537
6426	16.5	7.7	5.6	chr4	173287422	173288001	(16926554)	C	LTR25-int	LTR/ERV1	(5423)	1765	1150	3031396
2254	14.4	5.2	5.6	chr4	177400366	177400793	(12813762)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3036873
8667	13.3	1.2	1.2	chr4	178644881	178646615	(11567940)	C	L1MA3	LINE/L1	(63)	6242	4492	3038470
4028	10.1	3.8	0.2	chr4	178646616	178647198	(11567357)	C	LTR14B	LTR/ERVK	(0)	608	4	3038471
270	37.6	6.7	3.9	chr4	180116834	180117193	(10097362)	+	L2c	LINE/L2	2920	3290	(97)	3040347
1255	15.8	7.0	0.4	chr4	181129187	181129428	(9085127)	C	THE1C	LTR/ERVL-MaLR	(2)	373	115	3041680
3487	8.9	8.6	1.8	chr4	181129431	181129991	(9084564)	C	LTR14B	LTR/ERVK	(0)	608	6	3041681
1243	24.8	6.5	4.1	chr4	182330111	182330592	(7883963)	C	MER39	LTR/ERV1	(0)	707	1	3043276
963	26.9	11.2	3.3	chr4	182330593	182331263	(7883292)	+	L1MEj	LINE/L1	1278	2070	(90)	3043275
327	32.8	4.6	1.6	chr4	182474696	182474884	(7739671)	C	L1M5	LINE/L1	(3691)	2524	2330	3043455
317	30.8	6.7	12.5	chr4	183196697	183197063	(7017492)	+	L2c	LINE/L2	3028	3371	(16)	3044572
2226	7.9	0.7	1.0	chr4	183363515	183363804	(6850751)	C	AluSp	SINE/Alu	(23)	290	2	3044807
2463	16.1	4.8	0.0	chr4	183788421	183788855	(6425700)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	3045617
936	26.8	1.2	1.6	chr4	183788856	183789044	(6425511)	+	MIR	SINE/MIR	74	262	(0)	3045616
17	12.3	0.0	5.1	chr4	183905199	183905237	(6309318)	+	(CCCAGG)n	Simple_repeat	1	39	(0)	3045775
2155	8.8	10.0	3.0	chr4	184909081	184909485	(5305070)	C	LTR14B	LTR/ERVK	(0)	608	1	3047370
912	18.3	4.4	0.0	chr4	184933618	184933770	(5280785)	C	AluJb	SINE/Alu	(16)	296	137	3047405
353	24.8	10.5	4.0	chr4	185106553	185106703	(5107852)	+	MIR3	SINE/MIR	24	185	(23)	3047681
17520	6.5	1.7	2.1	chr4	185327749	185330014	(4884541)	C	LTR19-int	LTR/ERV1	(3329)	2257	1	3048107
2501	6.8	6.4	2.1	chr4	186364096	186364424	(3850131)	+	LTR14A	LTR/ERVK	1	344	(0)	3049561
1667	29.6	13.6	1.9	chr4	186364440	186365382	(3849173)	+	L2	LINE/L2	947	2016	(1403)	3049562
799	30.7	2.6	0.3	chr4	186832042	186832374	(3382181)	+	ERVL-E-int	LTR/ERVL	3622	3962	(1264)	3050209
1580	31.7	6.8	4.5	chr4	186832371	186833270	(3381285)	+	ERVL-E-int	LTR/ERVL	4117	5159	(598)	3050209
1602	17.3	4.5	0.9	chr4	188098202	188098522	(2116033)	C	MLT1A0	LTR/ERVL-MaLR	(32)	333	1	3052006
3047	26.2	4.2	2.3	chr4	189235479	189236133	(978422)	C	L1P4a	LINE/L1	(5397)	2764	2099	3053615
1556	22.3	10.1	2.0	chr4	189285418	189285906	(928649)	C	LTR53B	LTR/ERVL	(0)	533	1	3053662
2323	14.2	5.5	0.5	chr4	190112160	190112541	(102014)	C	HERVK-int	LTR/ERVK	(7134)	402	1	3054629
7805	8.0	0.5	1.3	chr4	190112542	190113546	(101009)	C	LTR5B	LTR/ERVK	(0)	1002	6	3054629
4747	18.1	7.3	9.6	chr4	190119764	190122447	(92108)	+	TAR1	Satellite/telo	1	2622	(566)	3054643
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
1095	10.4	0.7	0.9	chr4	190180974	190182175	(32380)	+	BSR/Beta	Satellite	1	1199	(0)	3054653
2125	0.2	0.0	0.3	chr5	10001	11835	(181526424)	+	(TAACCC)n	Simple_repeat	1	1835	(0)	3054965
17	29.7	0.0	2.9	chr5	53889	53957	(181484302)	+	G-rich	Low_complexity	1	69	(0)	3055018
9787	17.3	6.2	3.6	chr5	450272	453302	(181084957)	C	L1M4c	LINE/L1	(3229)	3153	25	3055435
2879	26.4	4.8	1.4	chr5	949690	951555	(180586704)	C	L1MC3	LINE/L1	(4915)	1130	223	3055822
2602	20.4	6.0	8.9	chr5	1806649	1807111	(179731148)	+	L1MB3	LINE/L1	5480	5912	(271)	3056669
47	4.3	0.0	7.1	chr5	1807112	1807195	(179731064)	+	(GAGGTACTCA)n	Simple_repeat	1	84	(0)	3056670
2602	20.4	6.0	8.9	chr5	1807196	1807458	(179730801)	+	L1MB3	LINE/L1	5913	6183	(0)	3056669
1835	26.9	12.0	2.4	chr5	6352071	6353115	(175185144)	+	L1ME3A	LINE/L1	4964	6141	(32)	3061719
646	26.3	12.6	6.6	chr5	6353117	6353466	(175184793)	+	MLT1D	LTR/ERVL-MaLR	1	374	(131)	3061720
1469	18.6	2.9	11.0	chr5	6420071	6420497	(175117762)	C	MLT1B	LTR/ERVL-MaLR	(0)	505	1	3061828
602	25.0	1.2	7.9	chr5	6593123	6593160	(174945099)	C	MIR	SINE/MIR	(28)	234	204	3062075
4313	7.1	5.1	0.2	chr5	6593161	6593738	(174944521)	C	LTR14B	LTR/ERVK	(0)	608	1	3062076
2123	14.2	1.5	2.2	chr5	7354428	7354831	(174183428)	C	L1MC1	LINE/L1	(276)	6057	5657	3063050
3552	12.2	1.0	4.7	chr5	7354832	7355453	(174182806)	C	LTR14B	LTR/ERVK	(0)	608	10	3063051
544	29.0	5.8	5.5	chr5	7880765	7881056	(173657203)	C	ERV3-16A3_I-int	LTR/ERVL	(3287)	1939	1647	3063694
1869	16.0	8.0	0.5	chr5	7898882	7899265	(173638994)	C	MSTB	LTR/ERVL-MaLR	(11)	415	1	3063713
222	33.7	2.9	3.2	chr5	7899267	7899389	(173638870)	C	L2b	LINE/L2	(60)	3327	3178	3063714
6955	19.6	2.9	0.8	chr5	7907499	7909627	(173628632)	C	L1M3f	LINE/L1	(4148)	3417	1242	3063726
401	30.4	3.1	3.5	chr5	8315878	8316133	(173222126)	+	MLT1J1	LTR/ERVL-MaLR	181	435	(9)	3064205
1129	28.3	5.3	1.9	chr5	10221838	10222258	(171316001)	C	MLT1L	LTR/ERVL-MaLR	(8)	602	167	3066518
527	24.9	12.7	2.0	chr5	10240441	10240637	(171297622)	+	MIR	SINE/MIR	3	223	(39)	3066536
1477	17.8	20.7	4.1	chr5	10240647	10240713	(171297546)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	442	3066537
2382	9.4	0.3	0.3	chr5	10240714	10241021	(171297238)	+	AluSp	SINE/Alu	1	308	(5)	3066538
680	23.7	1.9	0.0	chr5	10492038	10492193	(171046066)	+	MER20	DNA/hAT-Charlie	47	205	(14)	3066982
22793	13.1	3.5	1.4	chr5	10838847	10842887	(170695372)	+	L1MA3	LINE/L1	12	4146	(3419)	3067530
1600	19.6	1.8	4.3	chr5	11008166	11008512	(170529747)	+	MLT1D	LTR/ERVL-MaLR	2	339	(166)	3067767
801	34.6	4.9	3.1	chr5	11512702	11513277	(170024982)	C	LTR101_Mam	LTR/ERVL	(111)	718	132	3068393
1643	18.4	2.9	4.5	chr5	12146419	12146747	(169391512)	C	L1MA9	LINE/L1	(0)	6312	5985	3069205
1632	16.7	17.5	1.1	chr5	12146748	12147104	(169391155)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3069206
1667	23.7	4.4	5.3	chr5	12866217	12866397	(168671862)	+	MSTA	LTR/ERVL-MaLR	1	200	(228)	3070112
2186	11.7	0.0	0.3	chr5	12866398	12866688	(168671571)	+	AluSc	SINE/Alu	1	290	(19)	3070113
16	0.0	0.0	0.0	chr5	13252600	13252619	(168285640)	+	(AAC)n	Simple_repeat	1	20	(0)	3070567
509	29.8	8.9	1.5	chr5	13252622	13252880	(168285379)	C	MLT1I-int	LTR/ERVL-MaLR	(991)	396	117	3070564
4930	21.0	6.2	2.5	chr5	14081706	14082427	(167455832)	C	Charlie1a	DNA/hAT-Charlie	(698)	757	3	3071749
973	28.1	4.9	1.4	chr5	14082483	14082778	(167455481)	C	LTR16C	LTR/ERVL	(4)	485	179	3071753
316	23.8	14.3	3.8	chr5	14561552	14561682	(166976577)	C	MIR	SINE/MIR	(0)	262	116	3072337
946	18.9	1.7	0.6	chr5	14561690	14561865	(166976394)	C	MLT1A0	LTR/ERVL-MaLR	(185)	180	3	3072338
979	26.1	5.2	4.4	chr5	14561871	14562261	(166975998)	C	MLT1G	LTR/ERVL-MaLR	(232)	359	16	3072339
208	23.9	4.3	5.6	chr5	16828015	16828085	(164710174)	+	MIR	SINE/MIR	41	110	(152)	3075603
1931	12.0	0.0	4.7	chr5	16828347	16828646	(164709613)	+	AluSx	SINE/Alu	24	309	(3)	3075604
11518	9.3	1.0	1.8	chr5	16872967	16874052	(164664207)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	493	3075691
1602	19.2	6.4	6.4	chr5	17136034	17136439	(164401820)	C	MLT1A1	LTR/ERVL-MaLR	(2)	406	1	3076295
1103	21.6	3.7	18.7	chr5	17332602	17333062	(164205197)	+	LTR23	LTR/ERV1	1	391	(46)	3076648
1198	10.7	0.0	3.6	chr5	21496065	21496232	(160042027)	C	AluSx	SINE/Alu	(12)	300	139	3082088
502	16.3	7.7	2.0	chr5	21496233	21496330	(160041929)	+	AluSz6	SINE/Alu	197	300	(12)	3082089
13679	9.8	0.9	0.7	chr5	24305267	24308071	(157230188)	C	L1PA7	LINE/L1	(1)	6153	3347	3085925
2674	5.1	2.6	0.0	chr5	24308072	24308406	(157229853)	C	LTR14A	LTR/ERVK	(0)	344	1	3085926
5426	7.2	0.3	0.1	chr5	24750431	24751127	(156787132)	C	HERVK14-int	LTR/ERVK	(5398)	698	1	3086466
4173	9.1	3.8	0.5	chr5	24751128	24751712	(156786547)	C	LTR14B	LTR/ERVK	(0)	608	4	3086466
2219	18.1	1.5	4.5	chr5	27510063	27510322	(154027937)	+	L1MA9	LINE/L1	5837	6087	(225)	3090007
781	17.7	3.7	0.0	chr5	27510323	27510452	(154027807)	C	FLAM_C	SINE/Alu	(8)	135	1	3090008
3861	10.2	2.0	4.6	chr5	27964476	27965081	(153573178)	+	LTR14B	LTR/ERVK	19	608	(0)	3090569
346	16.9	0.0	0.0	chr5	27965083	27965141	(153573118)	C	L1PREC2	LINE/L1	(6717)	68	10	3090567
10455	4.3	0.5	0.3	chr5	31395307	31396628	(150141631)	C	HERV17-int	LTR/ERV1	(4872)	3754	2430	3094872
2410	4.4	0.4	0.0	chr5	32175493	32175793	(149362466)	C	AluY	SINE/Alu	(0)	311	6	3096325
1839	16.1	0.0	1.6	chr5	32217468	32217777	(149320482)	C	AluJr	SINE/Alu	(7)	305	1	3096427
4309	9.7	1.9	0.3	chr5	32346518	32347214	(149191045)	+	MER41-int	LTR/ERV1	4091	4752	(1194)	3096659
282	24.0	2.6	1.3	chr5	33033651	33033726	(148504533)	C	LTR33	LTR/ERVL	(0)	515	439	3097786
348	30.3	5.2	3.9	chr5	33033811	33034014	(148504245)	C	LTR33	LTR/ERVL	(252)	268	76	3097786
425	17.8	0.0	12.9	chr5	33735366	33735481	(147802778)	C	MER58D	DNA/hAT-Charlie	(0)	386	286	3098805
499	23.7	1.0	0.0	chr5	33735496	33735592	(147802667)	C	MER58B	DNA/hAT-Charlie	(242)	99	2	3098806
8780	11.2	6.4	4.5	chr5	34187312	34188853	(147349406)	+	THE1B-int	LTR/ERVL-MaLR	2	1574	(6)	3099485
14693	10.4	5.5	2.9	chr5	34418322	34419913	(147118346)	+	MER4-int	LTR/ERV1	3878	5519	(1079)	3099770
1278	31.3	3.8	8.2	chr5	36707229	36707865	(144830394)	C	LTR67B	LTR/ERVL	(3)	617	10	3103225
1193	28.8	3.7	5.5	chr5	36707963	36708656	(144829603)	C	ERVL-E-int	LTR/ERVL	(122)	5545	4897	3103226
8100	8.7	1.9	1.4	chr5	37282818	37283587	(144254672)	C	THE1B-int	LTR/ERVL-MaLR	(297)	1283	497	3104154
1743	9.5	0.0	3.6	chr5	37283581	37283830	(144254429)	+	THE1-int	LTR/ERVL-MaLR	120	360	(1220)	3104156
570	20.1	3.9	18.8	chr5	37439764	37440099	(144098160)	C	L1MC5	LINE/L1	(111)	9193	8910	3104544
261	29.8	13.6	5.3	chr5	38029965	38030152	(143508107)	C	LTR78	LTR/ERV1	(1042)	262	57	3105444
576	29.9	12.3	0.7	chr5	38053157	38053436	(143484823)	+	L3	LINE/CR1	3401	3717	(382)	3105489
204	35.4	3.1	6.8	chr5	38783371	38783542	(142754717)	+	MIR3	SINE/MIR	2	159	(49)	3106667
9713	16.0	1.1	0.4	chr5	39065448	39067086	(142471173)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1651	1	3107035
1528	22.9	9.0	0.0	chr5	39335403	39335716	(142202543)	+	MER2	DNA/TcMar-Tigger	1	345	(0)	3107416
2419	21.3	9.9	6.5	chr5	39335920	39336210	(142202049)	C	Charlie2b	DNA/hAT-Charlie	(1)	2781	2483	3107417
12	23.3	0.0	0.0	chr5	40835471	40835505	(140702754)	+	(TTGCTG)n	Simple_repeat	1	35	(0)	3109515
4062	10.5	0.7	4.4	chr5	42099748	42100377	(139437882)	+	LTR14B	LTR/ERVK	3	608	(0)	3111219
14635	18.1	4.2	2.3	chr5	42100378	42100435	(139437824)	C	L1PREC2	LINE/L1	(1100)	7041	6976	3111218
1842	9.2	1.6	3.6	chr5	42993459	42993751	(138544508)	C	AluSx1	SINE/Alu	(0)	312	37	3112369
390	32.4	2.1	2.1	chr5	50548389	50548533	(130989726)	+	LTR16C	LTR/ERVL	107	251	(238)	3116634
354	23.6	0.0	7.9	chr5	50548627	50548727	(130989532)	+	LTR16C	LTR/ERVL	383	475	(14)	3116634
647	15.8	5.6	0.0	chr5	50548750	50548850	(130989409)	C	FLAM_A	SINE/Alu	(16)	126	20	3116635
233	25.9	3.3	7.2	chr5	50897964	50898088	(130640171)	C	L1ME2	LINE/L1	(137)	6042	5923	3117078
1178	22.9	12.1	4.4	chr5	50898089	50898608	(130639651)	+	MER39	LTR/ERV1	1	701	(6)	3117079
3171	11.1	11.5	0.0	chr5	50981576	50982043	(130556216)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	3117187
549	34.3	5.0	0.8	chr5	51138955	51139221	(130399038)	C	L2a	LINE/L2	(33)	3393	3115	3117388
14540	22.8	1.4	0.1	chr5	53220574	53224199	(128314060)	C	HERV30-int	LTR/ERV1	(1912)	6345	2682	3119983
3712	24.6	8.4	5.3	chr5	53771091	53773073	(127765186)	+	L1M1	LINE/L1	460	3079	(4486)	3120706
240	23.9	2.1	0.0	chr5	53823405	53823450	(127714809)	+	LTR88b	LTR/Gypsy?	791	837	(0)	3120773
977	23.8	13.8	4.7	chr5	53823622	53823961	(127714298)	+	MLT1O	LTR/ERVL-MaLR	166	541	(1)	3120774
365	19.1	28.5	0.5	chr5	54304206	54304377	(127233882)	+	MIR	SINE/MIR	18	260	(8)	3121521
834	26.1	14.9	1.6	chr5	55423163	55423733	(126114526)	C	L2a	LINE/L2	(0)	3426	2661	3123212
2329	12.3	0.3	0.0	chr5	55843499	55843879	(125694380)	C	L1MCa	LINE/L1	(3531)	2790	2409	3123967
336	30.8	10.5	3.9	chr5	56429265	56429602	(125108657)	+	MLT1L	LTR/ERVL-MaLR	165	527	(83)	3125014
1248	23.3	2.5	6.3	chr5	57046359	57046924	(124491335)	C	L1M5	LINE/L1	(1533)	4613	3984	3125976
1089	23.0	13.4	6.8	chr5	57046989	57047403	(124490856)	+	MER39	LTR/ERV1	261	707	(0)	3125979
8366	17.8	10.1	1.7	chr5	60516786	60518390	(121019869)	+	MER52A	LTR/ERV1	1	1755	(0)	3130962
343	30.0	9.1	7.0	chr5	62259836	62260007	(119278252)	C	ERV3-16A3_LTR	LTR/ERVL	(220)	202	27	3133447
1667	20.7	7.4	0.9	chr5	65119289	65119629	(116418630)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	3137396
2223	17.1	4.2	1.9	chr5	65119632	65120053	(116418206)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3137397
4664	22.8	3.0	2.6	chr5	66211773	66212957	(115325302)	C	L1MEf	LINE/L1	(4370)	2270	1076	3139097
2281	13.4	2.1	1.3	chr5	67068234	67068611	(114469648)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3140329
617	30.6	7.7	0.4	chr5	67910973	67911202	(113627057)	C	MIR	SINE/MIR	(2)	260	13	3141390
2155	8.2	0.0	0.0	chr5	68130940	68131196	(113407063)	C	AluY	SINE/Alu	(52)	259	3	3141767
303	27.3	25.2	0.0	chr5	68131198	68131369	(113406890)	+	L2c	LINE/L2	3092	3321	(66)	3141768
584	31.6	5.8	0.9	chr5	68131377	68131606	(113406653)	+	MIR	SINE/MIR	20	261	(1)	3141769
16	20.1	0.0	2.4	chr5	68198237	68198278	(113339981)	+	(AACAAC)n	Simple_repeat	1	42	(0)	3141905
948	23.0	10.4	6.7	chr5	68265358	68265716	(113272543)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	3141994
498	20.2	3.1	2.0	chr5	68265724	68265893	(113272366)	+	L1ME2z	LINE/L1	6307	6417	(27)	3141995
2569	16.6	2.6	0.5	chr5	68401196	68401612	(113136647)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3142197
2299	10.9	4.3	1.6	chr5	68401613	68401976	(113136283)	C	THE1D	LTR/ERVL-MaLR	(7)	374	1	3142198
1405	20.1	16.2	0.7	chr5	68932814	68933114	(112605145)	C	LTR18A	LTR/ERVL	(0)	357	1	3142932
367	19.6	0.0	0.0	chr5	68933137	68933192	(112605067)	C	Tigger3c	DNA/TcMar-Tigger	(543)	59	4	3142929
2269	17.1	1.6	1.8	chr5	69469156	69469512	(112068747)	+	MSTB	LTR/ERVL-MaLR	1	362	(64)	3144119
3853	16.9	9.6	6.4	chr5	71289263	71290389	(110247870)	C	LTR12E	LTR/ERV1	(155)	1167	1	3147251
2168	17.2	7.0	3.4	chr5	72150982	72151421	(109386838)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	3148560
315	28.0	6.6	4.7	chr5	72151423	72151661	(109386598)	+	L1ME4c	LINE/L1	599	758	(72)	3148561
2049	18.0	3.5	3.0	chr5	72264436	72264894	(109273365)	+	MLT1C	LTR/ERVL-MaLR	3	463	(4)	3148710
6142	11.5	7.6	0.3	chr5	72935108	72936334	(108601925)	+	LTR12E	LTR/ERV1	5	1322	(0)	3149720
298	23.9	7.1	1.1	chr5	73145372	73145464	(108392795)	C	MER5A	DNA/hAT-Charlie	(47)	142	44	3150074
188	26.5	2.0	2.0	chr5	73145488	73145537	(108392722)	C	OldhAT1	DNA/hAT-Ac	(2584)	264	215	3150075
18	10.6	2.2	6.4	chr5	73342081	73342126	(108196133)	+	(CAA)n	Simple_repeat	1	47	(0)	3150348
12395	7.9	0.2	0.4	chr5	74523217	74524799	(107013460)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3152099
236	38.1	8.6	0.0	chr5	76309008	76309146	(105229113)	C	L2c	LINE/L2	(219)	3168	3017	3154795
2664	5.2	0.0	0.0	chr5	76309319	76309625	(105228634)	+	AluY	SINE/Alu	1	307	(4)	3154796
12	28.4	0.0	0.0	chr5	76331650	76331688	(105206571)	+	(TCCTT)n	Simple_repeat	1	39	(0)	3154827
9887	14.7	1.9	2.8	chr5	76854185	76855822	(104682437)	+	MSTA-int	LTR/ERVL-MaLR	1	1623	(8)	3155767
236	29.8	0.9	4.2	chr5	77138086	77138204	(104400055)	C	MER94B	DNA/hAT-Blackjack	(1)	132	18	3156251
4005	10.1	0.6	0.2	chr5	77191673	77192198	(104346061)	C	MER1A	DNA/hAT-Charlie	(0)	529	2	3156353
14812	18.0	3.1	0.8	chr5	77493974	77498267	(104039992)	+	L1MB4	LINE/L1	2010	6414	(2)	3156735
206	33.3	0.0	1.6	chr5	77745681	77745741	(103792518)	+	L2a	LINE/L2	3363	3422	(4)	3157105
2134	17.1	4.7	0.3	chr5	78819912	78820298	(102717961)	+	MLT1A1	LTR/ERVL-MaLR	1	405	(3)	3158658
310	35.0	10.8	2.6	chr5	78945673	78946054	(102592205)	+	L2c	LINE/L2	2921	3337	(50)	3158816
6751	10.1	1.4	0.0	chr5	82531378	82532335	(99005924)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	608	3164772
2972	7.7	0.0	1.0	chr5	82532331	82532739	(99005520)	C	THE1B-int	LTR/ERVL-MaLR	(1107)	473	69	3164772
1956	18.6	3.5	4.5	chr5	82918629	82919090	(98619169)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	3165293
8430	13.8	3.4	0.3	chr5	83347673	83349182	(98189077)	C	MSTA-int	LTR/ERVL-MaLR	(6)	1645	14	3165845
4164	7.3	3.8	2.4	chr5	84297504	84298094	(97240165)	C	LTR14B	LTR/ERVK	(2)	606	7	3167063
652	19.7	8.2	3.9	chr5	84630513	84630782	(96907477)	C	MSTB	LTR/ERVL-MaLR	(48)	378	59	3167523
1083	36.7	8.2	6.3	chr5	85085182	85086622	(96451637)	+	L2a	LINE/L2	757	2226	(1193)	3168100
13937	19.1	2.7	2.5	chr5	86461981	86464657	(95073602)	+	HERVE-int	LTR/ERV1	2936	5617	(2196)	3169823
12	5.0	0.0	4.3	chr5	86617668	86617690	(94920569)	+	(AAGA)n	Simple_repeat	1	23	(0)	3170030
11027	11.6	1.4	0.6	chr5	87318747	87320358	(94217901)	C	MSTA-int	LTR/ERVL-MaLR	(6)	1625	1	3170978
858	28.1	15.3	8.5	chr5	87457160	87457335	(94080924)	+	LTR16E1	LTR/ERVL	2	170	(368)	3171157
30	3.1	0.0	0.0	chr5	87457336	87457368	(94080891)	+	(TATCTA)n	Simple_repeat	1	33	(0)	3171158
858	28.1	15.3	8.5	chr5	87457369	87457674	(94080585)	+	LTR16E1	LTR/ERVL	171	523	(15)	3171157
2159	25.8	11.5	9.6	chr5	87521326	87522246	(94016013)	+	L1MEj	LINE/L1	654	1562	(598)	3171212
2651	6.5	1.2	0.0	chr5	88380384	88380723	(93157536)	+	LTR14A	LTR/ERVK	1	344	(0)	3172253
268	19.6	0.0	1.8	chr5	88600862	88600918	(92937341)	+	L1MDa	LINE/L1	1880	1935	(4698)	3172566
6154	22.4	2.2	1.8	chr5	90763985	90765229	(90773030)	C	L1PA17	LINE/L1	(5612)	1261	12	3175193
10796	13.1	0.6	0.5	chr5	92318738	92320366	(89217893)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	3177323
5087	18.8	2.2	3.3	chr5	92795340	92796402	(88741857)	C	MER11C	LTR/ERVK	(0)	1071	21	3177905
2613	20.7	8.9	3.0	chr5	92929831	92930397	(88607862)	+	MER77	LTR/ERVL	1	604	(0)	3178038
1217	32.2	9.2	4.9	chr5	92930398	92930550	(88607709)	C	L2b	LINE/L2	(983)	2436	2277	3178037
31	3.3	0.0	0.0	chr5	93582772	93582802	(87955457)	+	(GT)n	Simple_repeat	1	31	(0)	3178831
30	17.5	1.7	0.0	chr5	93603773	93603830	(87934429)	+	(CA)n	Simple_repeat	1	59	(0)	3178851
20	9.2	6.0	3.8	chr5	94792668	94792717	(86745542)	+	(CAACAA)n	Simple_repeat	1	53	(0)	3180282
17	31.4	1.4	1.4	chr5	95961739	95961810	(85576449)	+	(GCC)n	Simple_repeat	1	73	(0)	3181912
4077	19.8	7.6	3.7	chr5	96101790	96102642	(85435617)	C	LTR28B	LTR/ERV1	(72)	902	1	3182138
2449	18.3	12.9	1.3	chr5	96402184	96402793	(85135466)	+	MER76	LTR/ERVL	1	691	(0)	3182512
267	20.8	11.4	0.0	chr5	96523455	96523555	(85014704)	C	LTR88c	LTR/Gypsy?	(637)	225	112	3182691
908	30.6	3.8	3.6	chr5	96523614	96524030	(85014229)	C	MLT1J	LTR/ERVL-MaLR	(90)	422	5	3182692
717	28.6	7.2	5.9	chr5	96881519	96882012	(84656247)	C	MLT1J	LTR/ERVL-MaLR	(11)	501	1	3183260
404	30.6	20.1	4.1	chr5	96893738	96894206	(84644053)	+	L2c	LINE/L2	2823	3387	(0)	3183287
2003	11.6	5.4	1.4	chr5	97085817	97086173	(84452086)	C	THE1C	LTR/ERVL-MaLR	(0)	375	4	3183565
25	7.0	2.0	4.0	chr5	97086175	97086223	(84452036)	+	(TATATAT)n	Simple_repeat	1	50	(0)	3183566
375	37.7	5.2	1.1	chr5	100838122	100838381	(80699878)	C	MER102b	DNA/hAT-Charlie	(69)	272	2	3188254
5187	23.9	2.9	0.9	chr5	101534634	101535838	(80002421)	C	LTR25-int	LTR/ERV1	(5922)	1266	37	3189014
12448	19.4	2.7	0.9	chr5	101939505	101943544	(79594715)	C	L1PA16	LINE/L1	(2358)	4125	10	3189512
2614	5.7	0.0	0.0	chr5	102606950	102607247	(78931012)	+	AluYm1	SINE/Alu	4	301	(10)	3190341
761	24.0	0.6	1.2	chr5	102607314	102607486	(78930773)	C	MIR	SINE/MIR	(42)	220	49	3190342
840	29.5	2.4	1.6	chr5	102731934	102732181	(78806078)	C	MIRb	SINE/MIR	(2)	266	17	3190485
307	30.5	7.1	0.0	chr5	103026612	103026716	(78511543)	+	L2a	LINE/L2	3314	3426	(0)	3190878
446	31.8	4.4	1.3	chr5	103281051	103281203	(78257056)	C	MER117	DNA/hAT-Charlie	(2)	195	38	3191220
9809	6.5	10.0	1.0	chr5	104928810	104930242	(76608017)	+	LTR12C	LTR/ERV1	3	1579	(0)	3193251
10922	26.0	9.3	10.0	chr5	105844036	105847113	(75691146)	+	MER66-int	LTR/ERV1	3145	6105	(571)	3194339
426	34.0	2.5	3.4	chr5	108135070	108135273	(73402986)	+	MamRep1879	DNA/hAT-Tip100?	2	203	(13)	3197230
4893	8.0	3.7	1.2	chr5	109286321	109287325	(72250934)	C	MER11A	LTR/ERVK	(0)	1266	1	3198778
18	24.6	0.0	0.0	chr5	109668950	109668992	(71869267)	+	GA-rich	Low_complexity	1	43	(0)	3199295
2094	15.1	0.3	0.0	chr5	111164005	111164302	(70373957)	+	AluSz6	SINE/Alu	3	301	(11)	3201068
1797	17.3	10.8	4.3	chr5	111164303	111164454	(70373805)	C	MSTB1	LTR/ERVL-MaLR	(280)	152	4	3201067
330	29.9	8.3	3.5	chr5	111271205	111271439	(70266820)	+	MIR	SINE/MIR	16	257	(5)	3201216
470	31.7	1.2	1.2	chr5	111695177	111695345	(69842914)	+	MIRb	SINE/MIR	100	268	(0)	3201774
36	33.8	0.7	2.0	chr5	112384682	112384827	(69153432)	+	GA-rich	Low_complexity	1	147	(0)	3202706
323	28.0	2.0	4.7	chr5	113583179	113583328	(67954931)	+	L1MC5a	LINE/L1	2493	2638	(139)	3204500
667	23.0	5.8	8.9	chr5	113583372	113583475	(67954784)	C	L1MC5a	LINE/L1	(478)	2299	2206	3204501
2408	8.6	1.0	0.0	chr5	113583476	113583779	(67954480)	C	AluSg	SINE/Alu	(1)	309	3	3204502
12460	16.1	5.0	3.1	chr5	113882701	113885030	(67653229)	C	L1MB3	LINE/L1	(3822)	2560	181	3204868
7980	18.6	10.1	0.9	chr5	115165577	115167168	(66371091)	+	MER52A	LTR/ERV1	1	1755	(0)	3206386
3167	12.9	13.0	6.1	chr5	115167169	115167819	(66370440)	C	THE1D-int	LTR/ERVL-MaLR	(875)	705	4	3206385
12	20.0	5.0	0.0	chr5	115262801	115262840	(66275419)	+	(CCGCTCA)n	Simple_repeat	1	42	(0)	3206534
1484	21.6	3.9	2.1	chr5	115438352	115438746	(66099513)	+	MER54B	LTR/ERVL	1	418	(483)	3206803
1454	9.9	22.3	0.0	chr5	115438837	115439059	(66099200)	+	AluSz	SINE/Alu	1	287	(25)	3206804
1315	30.9	8.0	2.2	chr5	115875216	115875724	(65662535)	C	LTR105_Mam	LTR/ERVL	(46)	554	14	3207416
4502	23.2	5.5	4.8	chr5	116334793	116336268	(65201991)	+	L1MA6	LINE/L1	1896	3388	(4178)	3207996
1400	24.7	10.9	1.0	chr5	116583997	116584805	(64953454)	+	L2a	LINE/L2	2519	3426	(0)	3208292
798	21.4	4.8	0.0	chr5	116955204	116955381	(64582878)	C	MER5A	DNA/hAT-Charlie	(2)	187	1	3208930
2652	6.4	0.6	0.0	chr5	117522878	117523219	(64015040)	+	LTR14A	LTR/ERVK	1	344	(0)	3209716
788	29.8	2.6	3.6	chr5	117523220	117523439	(64014820)	+	MLT1E1A	LTR/ERVL-MaLR	381	596	(84)	3209715
2726	13.8	1.6	5.7	chr5	117713347	117713854	(63824405)	+	LTR76	LTR/ERV1	187	673	(2)	3209952
2645	14.5	1.2	0.2	chr5	117713889	117714316	(63823943)	+	L1PREC2	LINE/L1	4660	5091	(1055)	3209953
1666	17.8	4.0	9.1	chr5	119064499	119064635	(62473624)	C	LTR56	LTR/ERV1	(5)	440	309	3211772
2448	7.6	0.0	0.7	chr5	122993298	122993599	(58544660)	C	AluY	SINE/Alu	(11)	300	1	3216786
1213	24.9	15.6	5.2	chr5	123304870	123305432	(58232827)	C	LTR78B	LTR/ERV1	(358)	938	306	3217201
84	19.5	1.2	0.0	chr5	123964383	123964552	(57573707)	+	(CTCT)n	Simple_repeat	1	172	(0)	3218051
1045	14.6	0.0	0.0	chr5	123964575	123964718	(57573541)	C	AluJb	SINE/Alu	(82)	230	87	3218052
775	24.3	21.2	3.3	chr5	124583479	124583858	(56954401)	C	LTR16A1	LTR/ERVL	(0)	495	41	3218830
3033	10.6	10.8	3.1	chr5	124897496	124897981	(56640278)	+	MER1A	DNA/hAT-Charlie	2	529	(0)	3219335
3656	12.1	1.7	0.0	chr5	125079106	125079625	(56458634)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	3219587
237	25.0	1.2	5.6	chr5	125123095	125123183	(56415076)	+	L1ME3C	LINE/L1	5975	6059	(64)	3219650
486	27.8	3.4	1.7	chr5	125222262	125222433	(56315826)	+	MamGypLTR1b	LTR/Gypsy	367	541	(241)	3219782
12725	14.3	1.3	0.8	chr5	126668392	126670390	(54867869)	C	HERVH-int	LTR/ERV1	(1697)	6016	4008	3221676
2008	15.1	7.7	0.3	chr5	127207136	127207508	(54330751)	+	MSTA	LTR/ERVL-MaLR	26	428	(0)	3222535
3520	11.3	4.9	0.6	chr5	128073169	128073674	(53464585)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3223702
259	32.0	5.8	4.5	chr5	128428965	128429118	(53109141)	C	LTR78	LTR/ERV1	(681)	623	468	3224126
10238	10.3	4.8	1.6	chr5	128503334	128504861	(53033398)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3224225
3686	17.1	3.4	1.0	chr5	128874720	128874906	(52663353)	+	L1MB3	LINE/L1	5457	5646	(537)	3224685
2388	16.6	3.5	1.0	chr5	128874907	128875321	(52662938)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3224686
5398	18.2	3.9	2.5	chr5	130642484	130643196	(50895063)	C	L1MA2	LINE/L1	(6530)	1035	304	3226777
2876	13.2	5.7	0.6	chr5	130643197	130643682	(50894577)	C	MER9a3	LTR/ERVK	(0)	512	1	3226783
757	26.7	6.5	1.0	chr5	133233940	133234143	(48304116)	C	MER58A	DNA/hAT-Charlie	(0)	224	9	3230731
1993	14.2	6.8	3.1	chr5	133279151	133279476	(48258783)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	3230784
977	30.4	8.7	3.1	chr5	133920608	133921126	(47617133)	+	L1MC4	LINE/L1	6806	7356	(686)	3231582
207	36.3	5.2	4.5	chr5	134112131	134112398	(47425861)	+	L2b	LINE/L2	3080	3349	(26)	3231961
649	30.1	4.2	7.4	chr5	134140161	134140558	(47397701)	C	L2b	LINE/L2	(8)	3418	2980	3231991
276	27.6	5.6	3.6	chr5	134467347	134467395	(47070864)	+	MER103C	DNA/hAT-Charlie	65	115	(182)	3232625
1929	14.9	1.7	1.0	chr5	134467396	134467684	(47070575)	+	AluJb	SINE/Alu	21	311	(1)	3232626
827	16.4	6.3	2.2	chr5	135140584	135140764	(46397495)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	3233935
10403	10.5	7.4	0.8	chr5	135523002	135524522	(46013737)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	3234418
10056	9.7	0.2	12.1	chr5	135837872	135839664	(45698595)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3234821
2104	18.0	7.5	1.0	chr5	136756510	136756907	(44781352)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3236074
4921	15.4	1.1	1.5	chr5	136756908	136757278	(44780981)	C	L1MA9	LINE/L1	(991)	5321	4946	3236073
338	29.4	6.9	0.6	chr5	137220410	137220573	(44317686)	C	MIR	SINE/MIR	(7)	255	81	3236666
187	27.9	3.2	0.0	chr5	137220645	137220705	(44317554)	+	L2c	LINE/L2	3281	3343	(44)	3236667
1000	25.6	13.2	0.7	chr5	138036322	138036620	(43501639)	C	LTR78	LTR/ERV1	(768)	536	195	3237966
456	22.9	3.7	0.0	chr5	138696412	138696516	(42841743)	C	MIRb	SINE/MIR	(65)	203	95	3239382
3596	10.4	4.2	2.1	chr5	139189161	139189557	(42348702)	+	MER1A	DNA/hAT-Charlie	1	410	(119)	3240245
2027	13.9	0.3	0.0	chr5	139189558	139189844	(42348415)	+	AluSx	SINE/Alu	19	306	(6)	3240246
2426	8.9	0.0	1.6	chr5	139257667	139257980	(42280279)	C	AluSc	SINE/Alu	(0)	309	1	3240424
12	17.5	7.7	0.0	chr5	139258128	139258166	(42280093)	+	GA-rich	Low_complexity	1	42	(0)	3240425
483	34.6	4.1	9.5	chr5	139438640	139438977	(42099282)	+	L2b	LINE/L2	3054	3372	(3)	3240767
16	15.2	4.2	4.0	chr5	139439151	139439198	(42099061)	+	G-rich	Low_complexity	1	50	(0)	3240768
570	17.9	10.9	16.7	chr5	139575092	139575306	(41962953)	+	LTR41B	LTR/ERVL	3	203	(555)	3241082
393	25.6	5.0	3.8	chr5	139700115	139700233	(41838026)	+	MLT1K	LTR/ERVL-MaLR	151	287	(308)	3241328
2138	10.2	0.3	0.3	chr5	139713797	139714118	(41824141)	C	AluSx	SINE/Alu	(0)	312	1	3241356
1823	16.3	2.0	1.4	chr5	139749714	139749833	(41788426)	+	AluJb	SINE/Alu	1	120	(192)	3241441
28	34.2	0.8	2.4	chr5	139752627	139752752	(41785507)	+	(CA)n	Simple_repeat	1	127	(0)	3241448
19	4.5	0.0	0.0	chr5	140546676	140546698	(40991561)	+	(A)n	Simple_repeat	1	23	(0)	3242805
483	31.9	8.8	3.3	chr5	141506907	141507120	(40031139)	C	MIRb	SINE/MIR	(38)	230	4	3244113
447	28.5	2.8	1.7	chr5	142088104	142088278	(39449981)	+	MamRep564	Unknown	67	243	(114)	3245224
191	32.2	5.1	10.8	chr5	142285634	142285800	(39252459)	C	L2a	LINE/L2	(43)	3344	3188	3245637
496	23.8	13.1	0.6	chr5	142285903	142286075	(39252184)	C	L1ME4b	LINE/L1	(0)	892	695	3245643
577	26.1	22.4	1.0	chr5	142398764	142399077	(39139182)	+	L2a	LINE/L2	2957	3357	(69)	3245911
1014	32.4	14.2	2.0	chr5	143634235	143634838	(37903421)	+	L3	LINE/CR1	3309	3998	(101)	3248009
3846	8.1	8.4	4.0	chr5	145726914	145727493	(35810766)	C	LTR14B	LTR/ERVK	(0)	608	1	3251182
1550	8.3	0.0	0.5	chr5	145729527	145729745	(35808514)	C	HERVK14-int	LTR/ERVK	(5878)	218	1	3251186
3613	7.6	13.3	1.3	chr5	145729746	145730279	(35807980)	C	LTR14B	LTR/ERVK	(0)	608	1	3251186
483	28.5	4.5	5.3	chr5	145975732	145975965	(35562294)	+	MIR	SINE/MIR	21	247	(15)	3251632
14	18.4	0.0	0.0	chr5	148897996	148898026	(32640233)	+	(ACC)n	Simple_repeat	1	31	(0)	3256646
230	30.3	6.3	5.3	chr5	149002278	149002371	(32535888)	+	L3	LINE/CR1	3994	4088	(11)	3256849
775	15.2	1.5	3.6	chr5	149560641	149560778	(31977481)	+	AluJb	SINE/Alu	1	135	(177)	3257997
649	27.2	3.9	5.9	chr5	149637040	149637247	(31901012)	C	MER102c	DNA/hAT-Charlie	(16)	315	103	3258187
269	30.0	8.5	4.1	chr5	149656647	149656792	(31881467)	C	MamGypLTR3	LTR/Gypsy	(133)	761	609	3258240
286	27.4	4.6	0.2	chr5	149712406	149712525	(31825734)	+	MIRb	SINE/MIR	7	134	(128)	3258355
18	11.6	2.6	2.5	chr5	150002066	150002104	(31536155)	+	(TTTTG)n	Simple_repeat	1	40	(0)	3259014
318	26.6	8.3	4.3	chr5	150075193	150075377	(31462882)	+	L2a	LINE/L2	2573	2765	(654)	3259160
971	27.9	19.3	1.7	chr5	150075363	150075770	(31462489)	+	L2a	LINE/L2	2924	3420	(6)	3259160
2582	13.8	1.3	0.7	chr5	150992196	150992655	(30545604)	C	LTR46-int	LTR/ERV1	(5700)	1285	823	3260937
561	20.5	19.9	4.8	chr5	154157205	154157465	(27380794)	C	LTR50	LTR/ERVL	(101)	694	287	3266531
290	25.0	10.1	3.3	chr5	154157479	154157598	(27380661)	C	LTR50	LTR/ERVL	(566)	229	101	3266531
2327	6.7	3.4	0.0	chr5	154682189	154682471	(26855788)	C	AluSx	SINE/Alu	(19)	293	1	3267768
2301	24.5	3.5	2.4	chr5	155025916	155026540	(26511719)	+	L1M3d	LINE/L1	10	511	(5380)	3268515
2414	10.1	1.6	0.3	chr5	155026541	155026847	(26511412)	C	AluSx	SINE/Alu	(0)	312	2	3268516
41715	6.4	0.4	2.0	chr5	157880442	157886689	(23651570)	+	HERV9NC-int	LTR/ERV1	40	6117	(1)	3273526
422	34.4	3.5	9.1	chr5	158245354	158245749	(23292510)	C	MLT1K	LTR/ERVL-MaLR	(222)	373	1	3274283
229	33.5	7.2	1.9	chr5	158348035	158348192	(23190067)	+	MER5B	DNA/hAT-Charlie	1	167	(11)	3274437
293	33.0	14.2	3.6	chr5	159107138	159107438	(22430821)	+	L2c	LINE/L2	3002	3359	(28)	3275559
1188	28.4	14.6	1.3	chr5	159491377	159491976	(22046283)	C	MER115	DNA/hAT-Tip100	(12)	681	2	3276204
12	25.9	0.0	2.3	chr5	159798828	159798870	(21739389)	+	(CCCTTCT)n	Simple_repeat	1	43	(0)	3276738
1209	22.9	12.1	12.3	chr5	160165663	160166166	(21372093)	+	MLT1K	LTR/ERVL-MaLR	4	506	(89)	3277541
3011	12.6	5.4	11.1	chr5	161498586	161499217	(20039042)	+	LTR14B	LTR/ERVK	15	608	(0)	3279819
11	9.9	5.6	5.3	chr5	163437836	163437871	(18100388)	+	(GGTGCG)n	Simple_repeat	1	38	(0)	3282556
437	26.0	10.2	3.5	chr5	168397443	168397624	(13140635)	C	L1ME4a	LINE/L1	(196)	5928	5729	3289952
200	30.0	8.2	1.1	chr5	168418350	168418440	(13119819)	C	MER5B	DNA/hAT-Charlie	(62)	116	19	3290003
12012	14.3	1.5	1.7	chr5	170645919	170648937	(10889322)	+	L1MC1	LINE/L1	3310	6327	(6)	3294026
446	18.3	3.5	0.0	chr5	170744798	170744879	(10793380)	+	MER45A	DNA/hAT-Tip100	60	144	(34)	3294228
668	31.9	6.8	4.3	chr5	171356741	171357110	(10181149)	+	ERV3-16A3_I-int	LTR/ERVL	461	840	(4156)	3295101
215	23.5	5.6	0.0	chr5	172437963	172438021	(9100238)	C	L2b	LINE/L2	(0)	3426	3324	3297433
679	33.0	4.7	1.1	chr5	172438111	172438459	(9099800)	+	L2c	LINE/L2	3020	3381	(6)	3297434
1172	33.6	15.0	1.9	chr5	172704430	172705021	(8833238)	C	L2c	LINE/L2	(801)	2618	1978	3298002
2354	9.4	0.0	3.1	chr5	172780629	172780948	(8757311)	+	AluY	SINE/Alu	1	310	(1)	3298177
2355	9.8	0.0	0.0	chr5	173048783	173049079	(8489180)	C	AluSx	SINE/Alu	(15)	297	1	3298825
3773	11.7	2.2	5.3	chr5	173049080	173049199	(8489060)	C	LTR26D	LTR/ERV1	(480)	124	2	3298823
234	22.2	4.9	6.4	chr5	173123554	173123678	(8414581)	+	Tigger15a	DNA/TcMar-Tigger	202	324	(391)	3298982
403	21.2	0.9	0.1	chr5	173284361	173285203	(8253056)	+	(CATC)n	Simple_repeat	1	851	(0)	3299341
1041	26.7	6.5	2.4	chr5	173639142	173639552	(7898707)	C	LTR16	LTR/ERVL	(0)	438	10	3299961
245	30.9	1.2	0.3	chr5	173736941	173737056	(7801203)	+	MIR1_Amn	SINE/MIR	6	129	(101)	3300170
1671	17.7	1.7	0.7	chr5	173847473	173847760	(7690499)	+	AluJb	SINE/Alu	16	306	(6)	3300425
2341	15.4	5.4	1.9	chr5	173847761	173847922	(7690337)	C	MSTB	LTR/ERVL-MaLR	(256)	170	2	3300424
308	26.1	12.5	7.8	chr5	174370479	174370607	(7167652)	C	L2c	LINE/L2	(4)	3383	3248	3301380
227	31.0	0.0	5.4	chr5	174443360	174443451	(7094808)	C	MIRc	SINE/MIR	(120)	148	62	3301514
923	27.3	6.5	1.9	chr5	174501359	174501681	(7036578)	C	MER45C	DNA/hAT-Tip100	(552)	401	13	3301603
229	26.3	8.4	8.4	chr5	174751989	174752179	(6786080)	+	MamRep4096	DNA/hAT-Tip100	22	212	(214)	3302155
488	30.0	10.4	4.9	chr5	175037771	175038178	(6500081)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	20	3302692
1410	26.8	7.0	1.4	chr5	175826834	175827347	(5710912)	C	MLT1K	LTR/ERVL-MaLR	(19)	576	32	3304221
1735	16.4	10.1	0.6	chr5	176257332	176257679	(5280580)	C	MSTA	LTR/ERVL-MaLR	(27)	401	14	3304904
2380	12.0	0.0	0.0	chr5	176586187	176586495	(4951764)	C	AluSz	SINE/Alu	(3)	309	1	3305608
271	24.2	4.7	0.0	chr5	176586496	176586581	(4951678)	+	MIR3	SINE/MIR	39	133	(75)	3305607
591	29.3	11.2	0.0	chr5	176641926	176642140	(4896119)	C	MIR	SINE/MIR	(6)	256	15	3305727
266	30.0	3.2	0.0	chr5	176642257	176642346	(4895913)	C	Charlie8	DNA/hAT-Charlie	(2275)	153	61	3305728
1103	22.0	3.3	2.5	chr5	176994226	176994559	(4543700)	+	L1M5	LINE/L1	5306	5632	(546)	3306357
2513	14.4	10.6	7.9	chr5	176994560	176995117	(4543142)	C	LTR4	LTR/ERV1	(0)	596	22	3306366
262	28.1	3.5	2.4	chr5	177452645	177452728	(4085531)	+	MIR	SINE/MIR	77	161	(101)	3307448
19	12.4	0.0	0.0	chr5	177455614	177455648	(4082611)	+	(CGGGCT)n	Simple_repeat	1	35	(0)	3307452
309	27.8	7.3	0.0	chr5	177497934	177498058	(4040201)	+	MIRb	SINE/MIR	114	259	(9)	3307531
2500	19.5	1.3	5.0	chr5	178490256	178490584	(3047675)	+	L1MB3	LINE/L1	5819	6136	(47)	3309265
869	23.2	9.8	1.4	chr5	178598004	178598173	(2940086)	C	L1MC5a	LINE/L1	(603)	2174	1989	3309458
1880	13.6	9.9	1.7	chr5	178598174	178598517	(2939742)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3309459
336	24.5	3.3	3.3	chr5	178671664	178671783	(2866476)	+	L1MEg2	LINE/L1	434	531	(5921)	3309600
363	29.5	2.8	0.0	chr5	178671834	178671938	(2866321)	+	L1MEg2	LINE/L1	418	525	(5927)	3309601
2825	12.1	8.2	14.9	chr5	178742158	178742799	(2795460)	C	LTR14B	LTR/ERVK	(0)	608	14	3309733
1897	8.7	11.1	0.0	chr5	178778035	178778299	(2759960)	+	AluSg	SINE/Alu	1	298	(12)	3309793
3361	11.6	0.5	20.2	chr5	178908836	178909593	(2628666)	+	LTR14B	LTR/ERVK	1	608	(0)	3310045
26	27.6	3.9	0.9	chr5	178992858	178992960	(2545299)	+	GA-rich	Low_complexity	1	107	(0)	3310180
1563	27.9	3.2	6.3	chr5	179995331	179995964	(1542295)	C	L1PA15-16	LINE/L1	(6236)	617	4	3311902
699	38.5	11.7	3.7	chr5	180061094	180061395	(1476864)	+	L3b	LINE/CR1	3208	3611	(488)	3312004
1465	23.9	7.1	2.9	chr5	180061396	180061838	(1476421)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	5	3312008
2176	7.3	2.7	3.6	chr5	180090667	180090969	(1447290)	C	AluSz	SINE/Alu	(12)	300	1	3312066
6213	13.6	7.5	5.7	chr5	181036874	181038112	(500147)	+	MER52C	LTR/ERV1	10	1272	(6)	3313553
727	1.2	0.0	0.0	chr5	181097474	181097555	(440704)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3313641
727	1.2	0.0	0.0	chr5	181101840	181101921	(436338)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	3313644
2130	4.3	0.7	2.5	chr5	181262211	181262489	(275770)	C	AluY	SINE/Alu	(7)	304	31	3313945
1162	28.7	8.1	7.5	chr6	226749	227426	(170578553)	C	MER21C	LTR/ERVL	(129)	809	128	3314547
4031	9.6	1.3	2.2	chr6	232175	232708	(170573271)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3314557
3524	26.5	9.2	5.9	chr6	1021938	1023065	(169782914)	C	ERV3-16A3_I-int	LTR/ERVL	(2730)	2496	1360	3315523
387	27.1	11.2	2.2	chr6	1245894	1246030	(169559949)	+	MLT1F1	LTR/ERVL-MaLR	1	146	(402)	3315829
2457	8.6	0.0	0.0	chr6	1246031	1246334	(169559645)	+	AluSg	SINE/Alu	1	304	(6)	3315830
2760	15.8	11.4	6.4	chr6	1272342	1272922	(169533057)	+	LTR18B	LTR/ERVL	1	614	(0)	3315867
490	28.7	13.3	1.5	chr6	1371204	1371408	(169434571)	+	L1M5	LINE/L1	5415	5647	(477)	3316016
264	10.4	6.6	0.6	chr6	1472676	1473177	(169332802)	+	(TAGA)n	Simple_repeat	1	535	(0)	3316164
7629	16.8	7.7	11.3	chr6	2190757	2192959	(168613020)	+	MER52D	LTR/ERV1	7	2123	(0)	3317078
684	32.8	10.9	6.0	chr6	2272485	2273172	(168532807)	+	LTR78	LTR/ERV1	1	726	(578)	3317213
929	26.3	9.1	4.3	chr6	2363700	2364069	(168441910)	+	MLT1J2	LTR/ERVL-MaLR	24	431	(17)	3317328
187	20.0	8.5	11.8	chr6	2369153	2369237	(168436742)	C	MamRTE1	LINE/RTE-BovB	(935)	2877	2796	3317340
1146	17.4	5.0	0.8	chr6	2377550	2377831	(168428148)	+	MER2	DNA/TcMar-Tigger	29	333	(12)	3317352
7034	17.9	5.5	1.3	chr6	3010256	3012202	(167793777)	+	L1M3f	LINE/L1	1240	3272	(4293)	3318254
16	0.0	0.0	0.0	chr6	3562022	3562039	(167243940)	+	(T)n	Simple_repeat	1	18	(0)	3319092
12	16.9	0.0	0.0	chr6	3562054	3562080	(167243899)	+	(TTTC)n	Simple_repeat	1	27	(0)	3319093
1017	26.5	15.3	2.9	chr6	3747107	3747909	(167058070)	+	L2a	LINE/L2	2451	3423	(3)	3319350
339	26.7	2.6	0.0	chr6	3864757	3864831	(166941148)	C	MamGypLTR3a	LTR/Gypsy	(644)	337	261	3319558
1490	21.3	3.5	0.3	chr6	4845551	4845880	(165960099)	C	MER58B	DNA/hAT-Charlie	(0)	341	1	3321130
1414	24.2	11.9	3.3	chr6	4845881	4846490	(165959489)	C	BLACKJACK	DNA/hAT-Blackjack	(1666)	1303	634	3321125
334	31.7	1.9	0.0	chr6	5030818	5030921	(165775058)	+	MER3	DNA/hAT-Charlie	1	106	(103)	3321390
3595	10.7	4.2	0.6	chr6	6584098	6584605	(164221374)	C	MER1A	DNA/hAT-Charlie	(0)	529	3	3323605
8487	13.6	6.6	9.5	chr6	7456184	7457810	(163348169)	+	LTR12C	LTR/ERV1	3	1579	(0)	3325184
10814	12.6	1.2	1.6	chr6	8345545	8347179	(162458800)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3326591
31	3.3	0.0	0.0	chr6	9130336	9130366	(161675613)	+	(TG)n	Simple_repeat	1	31	(0)	3327692
5261	23.8	3.8	1.5	chr6	9851899	9854307	(160951672)	+	L1PA15-16	LINE/L1	1359	3620	(3295)	3328616
1138	19.6	8.1	9.9	chr6	10806000	10806172	(159999807)	+	MSTB2	LTR/ERVL-MaLR	113	297	(160)	3330222
2243	8.1	3.3	1.4	chr6	10806173	10806332	(159999647)	C	AluSq2	SINE/Alu	(11)	302	137	3330223
12	17.7	3.1	0.0	chr6	11224604	11224635	(159581344)	+	A-rich	Low_complexity	1	33	(0)	3330915
7561	8.9	22.8	0.0	chr6	12017224	12018441	(158787538)	C	LTR12C	LTR/ERV1	(0)	1579	3	3332086
479	34.9	8.9	2.1	chr6	12260340	12260579	(158545400)	C	HAL1	LINE/L1	(53)	2454	2197	3332416
1414	4.3	0.0	0.0	chr6	13214056	13214219	(157591760)	+	U1	snRNA	1	164	(1)	3333886
2757	8.8	0.3	0.3	chr6	13349280	13349634	(157456345)	C	MER1A	DNA/hAT-Charlie	(0)	529	175	3334100
230	15.8	0.0	0.0	chr6	13349633	13349670	(157456309)	C	MER1A	DNA/hAT-Charlie	(491)	38	1	3334100
33368	14.7	2.6	1.2	chr6	14434560	14438711	(156367268)	+	ERVL-B4-int	LTR/ERVL	1134	5381	(333)	3336000
341	27.2	10.9	0.0	chr6	14742696	14742809	(156063170)	+	MLT1L	LTR/ERVL-MaLR	141	268	(342)	3336480
287	35.5	8.8	2.0	chr6	15384915	15385424	(155420555)	+	L2a	LINE/L2	2667	3256	(170)	3337877
15	30.9	1.4	1.4	chr6	15662984	15663052	(155142927)	+	(CCGGCC)n	Simple_repeat	1	70	(0)	3338219
781	19.1	0.7	0.0	chr6	16017836	16017971	(154788008)	+	MER5A1	DNA/hAT-Charlie	7	143	(23)	3338846
2292	12.0	0.0	2.0	chr6	16017999	16018299	(154787680)	+	AluSx3	SINE/Alu	1	295	(16)	3338847
396	34.2	12.1	2.8	chr6	16152590	16152968	(154653011)	C	L2c	LINE/L2	(61)	3326	2921	3339064
474	34.7	3.5	2.0	chr6	16311106	16311358	(154494621)	C	MIRb	SINE/MIR	(8)	260	4	3339314
199	24.0	15.0	4.0	chr6	16311458	16311557	(154494422)	C	OldhAT1	DNA/hAT-Ac	(2106)	742	630	3339315
1483	22.5	2.7	3.7	chr6	17179053	17179430	(153626549)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3340675
3389	19.7	1.0	0.8	chr6	17358236	17358849	(153447130)	+	MSTB1-int	LTR/ERVL-MaLR	1037	1651	(0)	3341004
2483	11.9	6.7	0.7	chr6	17358850	17359255	(153446724)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3341004
1270	12.2	0.0	0.0	chr6	17516430	17516617	(153289362)	+	L1PB1	LINE/L1	5962	6149	(2)	3341294
13584	14.0	3.5	3.3	chr6	17682943	17683857	(153122122)	C	Tigger1	DNA/TcMar-Tigger	(588)	1830	955	3341581
1959	16.7	8.8	1.3	chr6	17683858	17684245	(153121734)	+	MSTB	LTR/ERVL-MaLR	5	424	(2)	3341583
228	33.1	11.6	3.4	chr6	17996801	17997069	(152808910)	C	L2b	LINE/L2	(0)	3375	3082	3342210
1743	26.9	22.7	1.8	chr6	18446982	18448493	(152357486)	C	L2a	LINE/L2	(52)	3374	1430	3343083
3295	13.1	0.8	4.7	chr6	19476876	19477347	(151328632)	C	MER1A	DNA/hAT-Charlie	(64)	465	2	3344480
7632	13.2	18.0	0.9	chr6	20318738	20320042	(150485937)	+	LTR12C	LTR/ERV1	3	1579	(0)	3345811
14	23.1	2.2	2.2	chr6	20344489	20344533	(150461446)	+	(TCTTTC)n	Simple_repeat	1	46	(0)	3345860
966	19.9	1.7	0.6	chr6	20344535	20344705	(150461274)	C	AluSx	SINE/Alu	(6)	306	134	3345861
16	21.3	0.0	2.2	chr6	20403564	20403608	(150402371)	+	G-rich	Low_complexity	1	45	(0)	3345988
26	26.9	1.2	1.1	chr6	20403657	20403742	(150402237)	+	(CGCCCC)n	Simple_repeat	1	87	(0)	3345989
3363	10.1	8.2	0.0	chr6	20686222	20686704	(150119275)	+	MER1A	DNA/hAT-Charlie	4	529	(0)	3346469
255	18.6	9.2	0.0	chr6	20811286	20811344	(149994635)	+	LTR65	LTR/ERV1	321	385	(284)	3346658
510	33.0	3.5	0.9	chr6	20820307	20820526	(149985453)	C	MIR	SINE/MIR	(0)	262	37	3346672
264	34.0	2.1	0.0	chr6	20820619	20820712	(149985267)	+	MIRc	SINE/MIR	23	118	(150)	3346673
977	26.6	17.4	0.8	chr6	20820736	20821333	(149984646)	C	L2a	LINE/L2	(1)	3425	2698	3346674
3043	19.5	12.2	3.7	chr6	21703222	21704099	(149101880)	+	L1MC5	LINE/L1	8342	9295	(9)	3348138
10194	7.7	8.8	2.2	chr6	21760978	21762448	(149043531)	+	LTR12C	LTR/ERV1	3	1579	(0)	3348249
3629	7.4	10.6	0.4	chr6	23898736	23899278	(146906701)	+	LTR14B	LTR/ERVK	4	608	(0)	3351126
3621	21.9	11.3	4.0	chr6	23899279	23899585	(146906394)	C	L1MC3	LINE/L1	(2460)	3861	3540	3351122
781	18.4	0.0	0.0	chr6	24359617	24359730	(146446249)	+	AluJo	SINE/Alu	3	116	(196)	3351759
16	8.3	0.0	0.0	chr6	24359731	24359756	(146446223)	+	(GGAA)n	Simple_repeat	1	26	(0)	3351760
12	28.7	1.9	1.9	chr6	24359983	24360035	(146445944)	+	G-rich	Low_complexity	1	54	(0)	3351761
2520	15.8	1.4	1.6	chr6	25197853	25198276	(145607703)	+	MSTB	LTR/ERVL-MaLR	1	423	(3)	3353231
195	37.3	6.2	0.0	chr6	25330082	25330156	(145475823)	C	L2b	LINE/L2	(9)	3366	3287	3353471
717	26.4	3.6	8.3	chr6	25412588	25412708	(145393271)	C	MIR	SINE/MIR	(132)	130	12	3353605
269	34.2	8.4	9.4	chr6	25706611	25707091	(145098888)	+	L1MEi	LINE/L1	190	665	(1547)	3353987
33	17.2	5.5	5.2	chr6	25959592	25959701	(144846278)	+	(AC)n	Simple_repeat	1	116	(0)	3354383
624	28.6	13.6	0.9	chr6	25959776	25960103	(144845876)	C	L2a	LINE/L2	(19)	3407	3032	3354384
623	4.2	0.0	0.0	chr6	26311747	26311818	(144494161)	C	tRNA-Gln-CAA	tRNA	(3)	72	1	3354997
2398	12.8	4.2	2.4	chr6	26335642	26336065	(144469914)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	3355048
181	32.0	4.0	6.7	chr6	26336066	26336169	(144469810)	C	MIR	SINE/MIR	(8)	254	154	3355049
650	1.4	0.0	0.0	chr6	26537498	26537570	(144268409)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	3355427
10843	13.5	0.7	0.2	chr6	26942510	26944133	(143861846)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	3356068
1653	16.1	4.8	5.8	chr6	26944136	26944517	(143861462)	+	MSTA	LTR/ERVL-MaLR	3	380	(1)	3356068
3832	10.6	1.3	2.0	chr6	27187521	27188070	(143617909)	+	LTR14	LTR/ERVK	3	548	(0)	3356439
20582	9.6	0.8	3.9	chr6	27188071	27190816	(143615163)	+	HERVKC4-int	LTR/ERVK	1	2671	(2591)	3356439
14059	11.1	1.6	0.2	chr6	27192219	27194239	(143611740)	+	HERVKC4-int	LTR/ERVK	2924	4971	(291)	3356439
945	14.7	0.6	1.3	chr6	27194240	27194398	(143611581)	C	LTR13	LTR/ERVK	(0)	1007	850	3356444
5338	14.7	2.8	6.2	chr6	27194433	27195433	(143610546)	C	LTR13A	LTR/ERVK	(0)	966	1	3356445
3867	11.0	0.4	2.1	chr6	27195722	27196279	(143609700)	+	LTR14	LTR/ERVK	1	548	(0)	3356439
3146	11.3	6.6	9.3	chr6	27352348	27352969	(143453010)	+	LTR14B	LTR/ERVK	5	608	(0)	3356757
14358	15.4	3.7	1.2	chr6	27352970	27354979	(143451000)	+	L1MA4	LINE/L1	4779	6824	(178)	3356755
647	24.0	6.0	3.0	chr6	27435701	27435944	(143370035)	+	MER54A	LTR/ERVL	220	418	(483)	3356887
1345	22.6	1.4	2.7	chr6	27556293	27556592	(143249387)	C	MER90a	LTR/ERV1	(0)	614	319	3357108
1693	12.1	16.1	0.0	chr6	33355251	33355586	(137450393)	+	LTR14B	LTR/ERVK	216	606	(2)	3366271
1130	13.1	0.0	2.2	chr6	33355588	33355766	(137450213)	C	HERVIP10FH-int	LTR/ERV1	(4927)	175	1	3366272
3306	12.4	4.2	5.1	chr6	34498885	34499418	(136306561)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3368551
307	31.4	12.5	4.1	chr6	36301253	36301727	(134504252)	+	L2b	LINE/L2	2788	3302	(73)	3372200
13	22.8	0.0	6.2	chr6	37654644	37654691	(133151288)	+	G-rich	Low_complexity	1	48	(0)	3375073
428	27.1	21.1	3.5	chr6	38114822	38115108	(132690871)	C	L2a	LINE/L2	(0)	3426	3076	3375938
1203	25.0	13.4	0.8	chr6	38115183	38115624	(132690355)	C	L2a	LINE/L2	(301)	3125	2626	3375939
2523	13.1	5.7	13.5	chr6	38709772	38710388	(132095591)	+	LTR14B	LTR/ERVK	17	562	(25)	3376840
10347	17.0	3.8	1.8	chr6	38965897	38966751	(131839228)	+	L1MB7	LINE/L1	3020	3911	(2235)	3377285
181	11.1	0.0	0.0	chr6	39066725	39066751	(131739228)	C	L3b	LINE/CR1	(201)	5031	5005	3377413
229	23.8	5.0	7.2	chr6	39066896	39066989	(131738990)	+	L2c	LINE/L2	3300	3383	(4)	3377411
197	39.8	11.7	0.0	chr6	39937982	39938109	(130867870)	+	L2b	LINE/L2	3224	3368	(7)	3378793
1823	17.2	14.9	2.3	chr6	39938146	39938543	(130867436)	+	MSTB2	LTR/ERVL-MaLR	1	457	(0)	3378794
2682	10.9	2.9	3.1	chr6	39993176	39993620	(130812359)	C	HERV1_LTRe	LTR/ERV1	(0)	537	94	3378877
18096	25.1	3.4	2.1	chr6	39994399	39999033	(130806946)	C	HERV3-int	LTR/ERV1	(3833)	4593	1	3378878
2592	11.3	6.5	1.2	chr6	39999036	39999455	(130806524)	C	HERV1_LTRe	LTR/ERV1	(1)	536	93	3378878
183	34.8	0.0	2.9	chr6	40351972	40352039	(130453940)	C	MIR3	SINE/MIR	(25)	183	118	3379326
402	29.7	10.5	5.3	chr6	40401203	40401600	(130404379)	+	MLT1J2	LTR/ERVL-MaLR	26	446	(2)	3379390
22	27.9	3.1	2.0	chr6	41488815	41488912	(129317067)	+	GA-rich	Low_complexity	1	101	(0)	3381255
11	21.6	7.3	1.7	chr6	41734213	41734267	(129071712)	+	(GGCCAGC)n	Simple_repeat	1	59	(0)	3381713
1151	23.3	17.9	7.2	chr6	42199452	42199870	(128606109)	+	MLT1G3	LTR/ERVL-MaLR	79	577	(2)	3382776
5298	12.3	2.9	1.4	chr6	42316508	42317314	(128488665)	+	LTR8B	LTR/ERV1	1	820	(0)	3383000
515	20.4	1.6	0.7	chr6	43290699	43290835	(127515144)	+	FLAM_C	SINE/Alu	21	217	(85)	3385075
966	26.1	13.6	0.8	chr6	43526188	43526558	(127279421)	C	L2a	LINE/L2	(13)	3413	2988	3385504
233	31.7	3.7	0.7	chr6	43724991	43725085	(127080894)	C	MIR3	SINE/MIR	(125)	143	49	3385904
183	35.0	1.6	0.0	chr6	43725111	43725170	(127080809)	+	L2	LINE/L2	1	61	(3358)	3385905
302	35.1	4.4	1.9	chr6	43848650	43848803	(126957176)	C	MIRb	SINE/MIR	(52)	216	59	3386123
255	28.7	0.0	7.3	chr6	43850842	43850950	(126955029)	+	MIRc	SINE/MIR	116	216	(52)	3386130
2372	9.8	0.0	0.3	chr6	44376521	44376827	(126429152)	+	AluSg	SINE/Alu	2	307	(3)	3387083
910	29.4	10.8	2.1	chr6	44539774	44540194	(126265785)	+	MLT1L	LTR/ERVL-MaLR	142	603	(7)	3387361
4447	15.9	3.2	4.7	chr6	45680947	45681516	(125124463)	+	L1MB3	LINE/L1	5641	6181	(2)	3388989
14	8.4	0.0	3.7	chr6	46045361	46045387	(124760592)	+	(TTCC)n	Simple_repeat	1	27	(0)	3389623
267	19.8	11.0	6.9	chr6	46058715	46058801	(124747178)	+	LTR67B	LTR/ERVL	40	130	(490)	3389647
247	29.0	3.9	3.1	chr6	46059048	46059175	(124746804)	+	MLT1N2	LTR/ERVL-MaLR	417	545	(17)	3389648
14882	18.9	6.5	2.9	chr6	46444480	46451068	(124354911)	+	L1MA8	LINE/L1	1135	7709	(1)	3390207
330	19.5	1.3	2.5	chr6	46471773	46471851	(124334128)	+	MIR	SINE/MIR	143	220	(42)	3390238
18	4.7	0.0	0.0	chr6	46471892	46471913	(124334066)	+	(CA)n	Simple_repeat	1	22	(0)	3390239
389	33.3	8.6	2.8	chr6	46472020	46472272	(124333707)	+	Tigger16b	DNA/TcMar-Tigger	12	280	(56)	3390240
7160	8.3	17.6	0.6	chr6	46841884	46842932	(123963047)	+	MER11A	LTR/ERVK	1	1266	(0)	3390806
1054	13.2	6.8	0.0	chr6	52654411	52654615	(118151364)	+	L1MD1	LINE/L1	5117	5336	(810)	3398892
1997	15.1	11.0	0.3	chr6	52654616	52654973	(118151006)	+	MSTA	LTR/ERVL-MaLR	1	401	(27)	3398893
14	13.8	2.9	2.8	chr6	52664740	52664774	(118141205)	+	(TCCC)n	Simple_repeat	1	36	(0)	3398909
9811	14.6	1.0	5.6	chr6	52821129	52822799	(117983180)	C	MSTA-int	LTR/ERVL-MaLR	(35)	1596	3	3399132
30225	4.8	0.6	0.6	chr6	52917231	52919208	(117886771)	C	HERV17-int	LTR/ERV1	(4210)	4416	2430	3399247
236	27.4	8.6	4.5	chr6	52937467	52937600	(117868379)	+	Plat_L3	LINE/CR1	3227	3366	(220)	3399278
3209	11.6	9.1	1.2	chr6	53928380	53928866	(116877113)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	3400933
260	20.4	0.0	0.0	chr6	54020494	54020542	(116785437)	C	L4_B_Mam	LINE/RTE-X	(180)	4761	4713	3401061
252	32.0	3.2	2.4	chr6	54020634	54020758	(116785221)	+	Tigger15a	DNA/TcMar-Tigger	4	129	(586)	3401062
1282	32.3	9.6	7.6	chr6	55213419	55214319	(115591660)	+	L1MB1	LINE/L1	675	1560	(5005)	3402654
3124	13.8	1.3	0.2	chr6	55621315	55621780	(115184199)	+	MER1A	DNA/hAT-Charlie	2	472	(57)	3403147
305	27.7	4.8	4.0	chr6	55955250	55955373	(114850606)	+	LTR79	LTR/ERVL	403	527	(0)	3403571
2235	14.2	5.5	1.7	chr6	63378464	63378878	(107427101)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	3410389
190	38.7	2.1	1.1	chr6	63378883	63378976	(107427003)	C	L2	LINE/L2	(512)	2907	2813	3410390
7031	17.1	5.2	7.0	chr6	63651662	63654283	(107151696)	C	L1MA5	LINE/L1	(259)	6041	3474	3410937
2522	23.5	3.4	1.4	chr6	69706831	69707412	(101098567)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	34	3418294
2393	10.6	0.3	0.0	chr6	70588239	70588540	(100217439)	+	AluSz	SINE/Alu	1	303	(9)	3419441
13041	22.1	5.9	3.9	chr6	70713089	70715086	(100090893)	C	L1MA9	LINE/L1	(2806)	4753	2602	3419643
391	27.0	2.3	8.7	chr6	71072464	71072601	(99733378)	C	MIR3	SINE/MIR	(67)	141	13	3420090
820	32.8	6.6	2.2	chr6	71160910	71161315	(99644664)	C	MamGypLTR1d	LTR/Gypsy	(0)	813	389	3420191
2184	12.2	0.0	1.9	chr6	73538851	73539161	(97266818)	+	AluSx1	SINE/Alu	1	305	(7)	3423693
1331	10.4	0.0	0.0	chr6	73539299	73539471	(97266508)	C	AluSq2	SINE/Alu	(21)	292	120	3423694
1289	29.6	4.2	3.3	chr6	73774397	73774938	(97031041)	C	L1MEh	LINE/L1	(1670)	565	19	3424207
1564	18.8	6.8	1.2	chr6	75620301	75620644	(95185335)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3426497
2201	16.1	0.8	2.4	chr6	77358415	77358797	(93447182)	+	THE1D	LTR/ERVL-MaLR	5	381	(0)	3428714
1819	8.1	0.4	0.8	chr6	77368679	77368928	(93437051)	C	LTR1A2	LTR/ERV1	(46)	791	543	3428725
1830	14.6	4.7	0.6	chr6	77368942	77369265	(93436714)	C	LTR1A2	LTR/ERV1	(499)	338	1	3428725
2055	11.0	9.3	4.4	chr6	78854118	78854531	(91951448)	+	LTR14B	LTR/ERVK	1	608	(0)	3430477
21995	6.9	0.9	0.9	chr6	78854532	78857411	(91948568)	+	HERVK14-int	LTR/ERVK	1	2882	(3214)	3430477
21357	10.3	1.0	2.1	chr6	79135898	79139440	(91666539)	+	L1PA13	LINE/L1	2454	5984	(782)	3430837
203	25.5	7.7	6.0	chr6	79813818	79813963	(90992016)	C	MIR	SINE/MIR	(39)	191	42	3431805
2374	9.3	16.1	5.8	chr6	80446622	80447054	(90358925)	C	LTR19A	LTR/ERV1	(0)	486	1	3432616
9944	10.6	4.7	4.0	chr6	82375930	82377497	(88428482)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3435084
2641	15.8	1.8	0.0	chr6	82410095	82410524	(88395455)	C	MSTB2	LTR/ERVL-MaLR	(19)	438	1	3435135
777	27.1	5.0	0.5	chr6	82410543	82410753	(88395226)	C	MIR	SINE/MIR	(8)	254	34	3435136
2708	18.2	7.1	0.7	chr6	82902145	82902753	(87903226)	+	L1MD2	LINE/L1	5490	6140	(219)	3435775
8663	11.7	10.2	3.1	chr6	82930349	82931859	(87874120)	+	THE1C-int	LTR/ERVL-MaLR	8	1631	(0)	3435808
31	23.0	0.9	4.7	chr6	83067992	83068096	(87737883)	+	G-rich	Low_complexity	1	106	(0)	3436015
249	24.6	14.5	5.8	chr6	83093121	83093258	(87712721)	+	L2a	LINE/L2	3270	3421	(5)	3436060
288	24.5	6.1	2.1	chr6	83460637	83460778	(87345201)	+	Charlie17b	DNA/hAT-Charlie	992	1139	(65)	3436556
2050	19.5	3.3	2.4	chr6	83460724	83460806	(87345173)	+	MLT1C	LTR/ERVL-MaLR	12	89	(378)	3436557
2355	17.1	3.8	0.5	chr6	83460807	83461218	(87344761)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3436558
2038	11.5	12.3	0.0	chr6	83867684	83867996	(86937983)	+	LTR18A	LTR/ERVL	1	357	(0)	3437088
3322	20.7	4.9	2.7	chr6	84078932	84079558	(86726421)	+	L1ME2	LINE/L1	5507	6153	(11)	3437393
2499	16.0	0.9	3.7	chr6	84355086	84355521	(86450458)	+	MSTB	LTR/ERVL-MaLR	1	424	(2)	3437752
3980	11.0	1.0	4.6	chr6	86146710	86147338	(84658641)	+	LTR14B	LTR/ERVK	3	608	(0)	3439954
9349	7.8	15.2	0.1	chr6	86284002	86285339	(84520640)	C	LTR12C	LTR/ERV1	(0)	1579	3	3440092
13	27.2	2.2	6.5	chr6	87923143	87923232	(82882747)	+	(CCCTGCC)n	Simple_repeat	1	92	(0)	3442445
236	11.8	0.0	0.0	chr6	88881186	88881219	(81924760)	+	Charlie2b	DNA/hAT-Charlie	1846	1879	(903)	3443718
883	27.6	5.7	2.8	chr6	88881214	88881571	(81924408)	C	Charlie2a	DNA/hAT-Charlie	(1021)	1840	1472	3443719
274	21.9	0.0	1.5	chr6	88944751	88944815	(81861164)	C	MamGypLTR2b	LTR/Gypsy	(36)	886	823	3443831
3695	13.7	0.6	0.4	chr6	89557614	89558141	(81247838)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	3444989
20	11.6	0.0	0.0	chr6	90218492	90218526	(80587453)	+	(T)n	Simple_repeat	1	35	(0)	3446049
237	28.7	8.7	2.1	chr6	90287060	90287155	(80518824)	C	Tigger16a	DNA/TcMar-Tigger	(777)	180	78	3446156
546	23.8	14.6	4.1	chr6	90836495	90836713	(79969266)	C	MER45C	DNA/hAT-Tip100	(2)	951	706	3446927
599	29.7	17.3	1.6	chr6	90836718	90836970	(79969009)	C	MER45C	DNA/hAT-Tip100	(564)	389	89	3446927
9837	11.6	5.2	0.8	chr6	90914837	90916345	(79889634)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	3447015
18026	7.8	0.6	0.3	chr6	91591715	91594967	(79211012)	+	L1PA6	LINE/L1	2887	6153	(1)	3447888
16763	17.9	2.5	3.4	chr6	92301111	92303642	(78502337)	+	L1MA1	LINE/L1	16	2553	(5012)	3448757
10344	14.7	0.9	0.1	chr6	95420051	95421667	(75384312)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	2	3452443
226	20.7	8.4	2.2	chr6	96679834	96679922	(74126057)	C	HAL1	LINE/L1	(2330)	177	83	3454000
2130	12.5	0.0	1.6	chr6	97545395	97545704	(73260275)	C	THE1B	LTR/ERVL-MaLR	(59)	305	1	3455162
3892	19.6	4.1	2.6	chr6	97545705	97546514	(73259465)	C	L1M1	LINE/L1	(6713)	852	30	3455160
405	29.6	18.9	3.7	chr6	98790576	98790682	(72015297)	+	L4_B_Mam	LINE/RTE-X	4194	4351	(590)	3456705
1642	16.6	7.4	2.8	chr6	98790683	98791004	(72014975)	C	MER1B	DNA/hAT-Charlie	(0)	339	2	3456706
390	28.6	15.0	6.1	chr6	98923009	98923364	(71882615)	+	LTR16A1	LTR/ERVL	78	493	(2)	3456877
2265	13.6	5.0	0.0	chr6	99026112	99026450	(71779529)	C	LTR18A	LTR/ERVL	(0)	357	1	3457012
2334	10.5	4.7	3.1	chr6	99026485	99026839	(71779140)	+	THE1B	LTR/ERVL-MaLR	4	364	(0)	3457014
2833	12.5	1.8	3.3	chr6	99882146	99882260	(70923719)	C	L1MA8	LINE/L1	(3)	6288	6177	3458282
2433	15.9	3.5	0.2	chr6	99882261	99882677	(70923302)	+	MSTB1	LTR/ERVL-MaLR	1	431	(1)	3458283
6829	11.7	1.7	0.5	chr6	100815061	100816918	(69989061)	+	L1PA13	LINE/L1	4283	6158	(5)	3459506
271	22.4	13.3	0.0	chr6	100915014	100915098	(69890881)	C	MLT1I	LTR/ERVL-MaLR	(8)	440	343	3459643
277	26.8	9.3	3.0	chr6	100915127	100915226	(69890753)	C	MLT1I	LTR/ERVL-MaLR	(271)	140	34	3459643
215	11.9	2.9	2.8	chr6	104424026	104424441	(66381538)	+	GA-rich	Low_complexity	1	428	(0)	3463944
1572	21.8	7.6	0.9	chr6	105052282	105052614	(65753365)	C	MSTD	LTR/ERVL-MaLR	(0)	396	40	3464864
3332	24.6	7.6	2.3	chr6	105052622	105053382	(65752597)	C	L1MEf	LINE/L1	(2727)	3592	2757	3464865
2650	15.9	2.8	0.0	chr6	105408904	105409319	(65396660)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3465384
490	14.5	1.2	0.0	chr6	105409320	105409402	(65396577)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1651	1568	3465384
1760	19.6	0.4	1.1	chr6	105409406	105409681	(65396298)	C	AluJb	SINE/Alu	(38)	274	1	3465385
4393	13.2	0.4	5.8	chr6	106858397	106859126	(63946853)	+	LTR8	LTR/ERV1	1	691	(0)	3467643
1005	20.4	5.4	5.8	chr6	107437556	107437795	(63368184)	C	MER8	DNA/TcMar-Tigger	(0)	239	1	3468855
882	12.7	1.9	11.7	chr6	107612476	107612588	(63193391)	+	MER5A	DNA/hAT-Charlie	29	135	(54)	3469113
2290	17.2	6.0	1.5	chr6	107612589	107613066	(63192913)	C	L1MB4	LINE/L1	(0)	6180	5680	3469114
12880	13.3	4.7	2.9	chr6	107917441	107918444	(62887535)	+	Tigger1	DNA/TcMar-Tigger	433	1472	(946)	3469576
2722	5.3	1.2	0.0	chr6	107990629	107990968	(62815011)	+	LTR14A	LTR/ERVK	1	344	(0)	3469739
239	33.0	4.0	3.3	chr6	108968239	108968379	(61837600)	C	MIRc	SINE/MIR	(88)	142	4	3471449
323	31.5	8.8	6.8	chr6	109062191	109062425	(61743554)	C	L2c	LINE/L2	(223)	3152	2913	3471578
242	9.5	8.7	0.0	chr6	109062486	109062527	(61743452)	+	MER94	DNA/hAT-Blackjack	80	125	(9)	3471580
320	29.9	17.5	6.0	chr6	109495548	109496084	(61309895)	+	L2c	LINE/L2	1283	1894	(1525)	3472265
15	22.1	0.0	2.3	chr6	110476631	110476674	(60329305)	+	(CGCCC)n	Simple_repeat	1	44	(0)	3473710
2899	12.3	4.0	0.2	chr6	110617020	110617500	(60188479)	+	MER39B	LTR/ERV1	1	500	(153)	3473962
3579	14.1	0.6	0.0	chr6	110699888	110700412	(60105567)	+	MER1A	DNA/hAT-Charlie	1	528	(1)	3474120
3648	7.5	5.7	0.2	chr6	110922604	110923087	(59882892)	+	MER9a3	LTR/ERVK	1	512	(0)	3474610
2906	24.4	8.8	2.7	chr6	112024156	112025051	(58780928)	+	L2a	LINE/L2	2426	3426	(0)	3476534
37	21.7	0.0	0.0	chr6	112254337	112254409	(58551570)	+	(CT)n	Simple_repeat	1	73	(0)	3476842
23	21.0	3.3	0.0	chr6	112653900	112653917	(58152062)	+	(TATGTA)n	Simple_repeat	1	65	(0)	3477386
16	31.0	0.0	0.0	chr6	112653918	112653962	(58152017)	+	(TG)n	Simple_repeat	1	45	(0)	3477387
642	31.1	10.9	3.0	chr6	113964639	113964999	(56840980)	+	L2	LINE/L2	2290	2682	(737)	3479413
954	28.1	9.4	1.6	chr6	114146977	114147224	(56658755)	+	MLT1J1-int	LTR/ERVL-MaLR	1037	1301	(86)	3479712
575	16.1	3.8	0.5	chr6	114147278	114147413	(56658566)	+	MLT1J1	LTR/ERVL-MaLR	63	246	(266)	3479712
2188	15.2	7.3	3.9	chr6	114430604	114431042	(56374937)	+	MSTB2	LTR/ERVL-MaLR	3	457	(0)	3480117
9526	13.4	3.5	3.4	chr6	115735151	115736727	(55069252)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	3481657
2290	14.8	2.1	0.0	chr6	115736728	115737100	(55068879)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3481657
1629	20.7	4.1	1.4	chr6	116677860	116678142	(54127837)	C	MLT1A0	LTR/ERVL-MaLR	(68)	297	1	3482926
1523	30.3	11.1	5.1	chr6	116961951	116962192	(53843787)	+	L2a	LINE/L2	2015	2263	(1156)	3483292
2194	17.6	3.8	3.1	chr6	116962193	116962615	(53843364)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3483293
9948	11.7	4.2	3.8	chr6	117145224	117146796	(53659183)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3483525
2536	8.1	0.0	0.0	chr6	117233693	117234001	(53571978)	C	AluSx3	SINE/Alu	(2)	309	1	3483637
21	4.0	0.0	0.0	chr6	117265268	117265293	(53540686)	+	(TC)n	Simple_repeat	1	26	(0)	3483668
16	20.0	4.3	0.0	chr6	117265452	117265497	(53540482)	+	(CCCCCG)n	Simple_repeat	1	48	(0)	3483669
696	28.3	1.8	1.4	chr6	117944940	117945170	(52860809)	C	L2a	LINE/L2	(3)	3423	3146	3484520
188	31.5	16.4	1.4	chr6	118327213	118327357	(52478622)	+	L2b	LINE/L2	2626	2796	(623)	3485036
739	26.2	10.6	0.0	chr6	118327451	118327687	(52478292)	+	L2a	LINE/L2	3162	3426	(0)	3485037
1472	14.5	15.4	3.4	chr6	118392592	118392785	(52413194)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	176	3485129
2356	12.5	0.0	0.0	chr6	118392786	118393097	(52412882)	+	AluSx1	SINE/Alu	1	312	(0)	3485130
44990	10.6	0.9	0.5	chr6	118617801	118624278	(52181701)	+	HERV30-int	LTR/ERV1	3	6502	(1755)	3485403
2186	14.2	10.2	0.0	chr6	118792191	118792571	(52013408)	C	MSTB	LTR/ERVL-MaLR	(2)	424	1	3485698
435	31.8	6.3	0.4	chr6	118792622	118792832	(52013147)	+	MIR	SINE/MIR	2	226	(42)	3485699
1841	15.7	13.8	0.0	chr6	118936420	118936788	(51869191)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	5	3485883
1238	17.2	0.0	4.1	chr6	118936820	118936950	(51869029)	C	AluJb	SINE/Alu	(17)	295	165	3485884
2296	28.2	9.9	7.0	chr6	119073402	119074650	(51731329)	+	LTR78	LTR/ERV1	3	1292	(12)	3486082
12467	11.1	1.4	0.0	chr6	119082302	119083909	(51722070)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	2	3486089
909	29.3	12.2	0.3	chr6	119646364	119646715	(51159264)	C	LTR33	LTR/ERVL	(115)	400	1	3486836
10270	10.8	3.7	0.4	chr6	121232711	121235699	(49570280)	C	L1PB1	LINE/L1	(2989)	3873	634	3488701
14	10.3	5.9	2.8	chr6	121540343	121540376	(49265603)	+	(TTG)n	Simple_repeat	1	36	(0)	3489189
1610	16.4	3.0	4.9	chr6	121540404	121540707	(49265272)	+	AluJr	SINE/Alu	1	298	(14)	3489190
1247	27.1	6.8	1.2	chr6	123235089	123235518	(47570461)	+	HAL1M8	LINE/L1	147	602	(2389)	3491446
1611	19.2	7.4	1.2	chr6	123824944	123825285	(46980694)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3492217
251	30.6	3.2	6.2	chr6	123825286	123825345	(46980634)	+	Tigger15a	DNA/TcMar-Tigger	597	656	(59)	3492216
2034	20.1	4.4	0.0	chr6	125110884	125111292	(45694687)	+	MSTB1	LTR/ERVL-MaLR	5	432	(0)	3493867
4297	21.1	7.6	2.2	chr6	125111293	125111947	(45694032)	C	L1M2	LINE/L1	(4269)	3297	2574	3493864
3816	12.5	0.0	0.0	chr6	125217160	125217688	(45588291)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3494040
4799	14.6	1.1	4.9	chr6	126550438	126551288	(44254691)	C	LTR1B1	LTR/ERV1	(0)	818	1	3495776
2867	14.7	3.2	8.2	chr6	127397276	127397899	(43408080)	+	LTR14B	LTR/ERVK	17	608	(0)	3496845
3214	13.7	0.4	0.4	chr6	127397900	127398413	(43407566)	+	MER41B	LTR/ERV1	121	634	(0)	3496844
40	35.8	4.6	1.1	chr6	129608951	129609212	(41196767)	+	GA-rich	Low_complexity	1	274	(0)	3499675
3173	12.5	4.5	2.9	chr6	130005528	130006045	(40799934)	C	MER1A	DNA/hAT-Charlie	(0)	529	3	3500289
2873	20.2	5.3	5.0	chr6	131197433	131197751	(39608228)	C	L1MEc	LINE/L1	(5081)	1319	1001	3502001
2542	8.1	27.1	0.9	chr6	131197752	131198198	(39607781)	C	LTR14B	LTR/ERVK	(0)	608	1	3502002
225	29.3	7.9	5.4	chr6	131451536	131451683	(39354296)	+	MIRc	SINE/MIR	89	240	(28)	3502350
918	32.1	7.5	2.0	chr6	133366035	133366485	(37439494)	C	L2a	LINE/L2	(669)	2750	2273	3505141
427	32.0	9.5	0.8	chr6	133689524	133689708	(37116271)	C	ERVL-E-int	LTR/ERVL	(738)	4976	4713	3505563
2297	18.5	3.1	2.9	chr6	133689709	133690193	(37115786)	C	MER66B	LTR/ERV1	(0)	486	1	3505564
30	0.0	0.0	0.0	chr6	133952134	133952162	(36853817)	+	(GGCGT)n	Simple_repeat	1	29	(0)	3505928
3590	26.8	13.1	2.6	chr6	133994742	133995690	(36810289)	C	L2a	LINE/L2	(1120)	2299	1255	3505986
1306	21.4	6.1	1.9	chr6	134600435	134600810	(36205169)	+	L1ME1	LINE/L1	5583	5975	(204)	3507163
2591	4.3	5.2	0.0	chr6	134600811	134601136	(36204843)	C	LTR14A	LTR/ERVK	(0)	344	1	3507164
1969	13.6	4.4	0.3	chr6	134604735	134605080	(36200899)	C	HERVK14-int	LTR/ERVK	(5735)	361	1	3507166
2753	5.5	0.3	0.0	chr6	134605081	134605423	(36200556)	C	LTR14A	LTR/ERVK	(0)	344	1	3507166
180	24.1	3.3	4.9	chr6	134820871	134820931	(35985048)	+	MIR1_Amn	SINE/MIR	69	128	(102)	3507511
1534	14.6	0.8	4.6	chr6	135223075	135223335	(35582644)	C	AluJb	SINE/Alu	(0)	312	62	3508146
1316	29.8	14.4	3.3	chr6	135223336	135224085	(35581894)	+	L2	LINE/L2	1829	2670	(749)	3508145
417	25.4	13.1	4.6	chr6	135673933	135674126	(35131853)	+	Charlie15a	DNA/hAT-Charlie	1	213	(11)	3508769
2466	10.5	1.1	0.6	chr6	135763230	135763582	(35042397)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3508924
2227	20.5	10.6	4.6	chr6	135763584	135764146	(35041833)	C	L1ME1	LINE/L1	(659)	5505	4952	3508921
2285	11.1	3.3	2.5	chr6	135930025	135930385	(34875594)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3509144
311	32.3	7.8	4.2	chr6	135930386	135930663	(34875316)	C	L2	LINE/L2	(567)	2852	2563	3509143
392	29.3	17.1	5.8	chr6	136284683	136285232	(34520747)	C	L2a	LINE/L2	(25)	3401	2767	3509614
4770	10.4	2.4	3.9	chr6	136334328	136335133	(34470846)	+	LTR1A2	LTR/ERV1	44	837	(0)	3509725
803	21.2	9.8	5.5	chr6	136335147	136335475	(34470504)	C	MLT1C	LTR/ERVL-MaLR	(122)	345	1	3509724
774	20.6	13.0	0.0	chr6	136423202	136423395	(34382584)	+	MIRb	SINE/MIR	36	258	(10)	3509865
1912	16.9	0.3	0.7	chr6	136720783	136721078	(34084901)	C	AluJr	SINE/Alu	(17)	295	1	3510335
304	31.2	12.4	2.4	chr6	136721189	136721434	(34084545)	+	L1MC	LINE/L1	3045	3318	(2828)	3510336
4334	8.3	3.0	5.4	chr6	137119290	137119979	(33686000)	+	LTR76	LTR/ERV1	1	673	(2)	3511013
370	25.0	11.5	2.7	chr6	137832755	137832865	(32973114)	C	L2b	LINE/L2	(9)	3366	3245	3512057
9521	11.0	6.3	10.9	chr6	139233781	139235492	(31570487)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	3514313
1293	22.0	0.4	0.0	chr6	140623493	140623724	(30182255)	+	Tigger7	DNA/TcMar-Tigger	32	264	(2227)	3516273
595	13.9	1.0	3.8	chr6	140623723	140623827	(30182152)	+	Tigger7	DNA/TcMar-Tigger	2389	2490	(1)	3516274
704	24.7	1.2	0.0	chr6	140623828	140623988	(30181991)	+	MER58B	DNA/hAT-Charlie	178	340	(1)	3516275
3041	18.0	6.0	3.7	chr6	140897539	140898219	(29907760)	C	MER61-int	LTR/ERV1	(4518)	699	2	3516606
365	32.9	12.9	1.3	chr6	142378329	142378485	(28427494)	+	MamTip2	DNA/hAT-Tip100	33	210	(95)	3518438
271	24.4	8.5	5.5	chr6	142716083	142716173	(28089806)	+	MIRb	SINE/MIR	20	113	(155)	3518879
2445	14.4	3.6	0.0	chr6	142716179	142716582	(28089397)	+	MSTB1	LTR/ERVL-MaLR	1	419	(13)	3518880
2758	13.2	10.0	1.0	chr6	142860340	142860820	(27945159)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3519078
36756	5.2	0.4	1.1	chr6	143080446	143085197	(27720782)	C	HERV17-int	LTR/ERV1	(1479)	7147	2430	3519363
524	27.0	7.8	8.8	chr6	143879022	143879386	(26926593)	C	HAL1	LINE/L1	(2112)	395	35	3520536
5063	19.1	3.7	0.4	chr6	144058437	144059374	(26746605)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	682	3520775
2291	10.1	0.7	0.3	chr6	147576143	147576438	(23229541)	C	AluSx	SINE/Alu	(15)	297	1	3525585
394	22.8	3.2	1.1	chr6	147576637	147576729	(23229250)	C	MIR	SINE/MIR	(71)	191	97	3525586
3610	12.0	4.0	0.0	chr6	148005573	148006080	(22799899)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3526210
1594	21.9	5.1	2.5	chr6	148710231	148710591	(22095388)	C	MLT1A	LTR/ERVL-MaLR	(3)	371	1	3527326
113	4.8	0.0	1.5	chr6	148710620	148710754	(22095225)	+	(CTCCT)n	Simple_repeat	1	135	(0)	3527327
11104	10.0	0.7	1.6	chr6	149908003	149909595	(20896384)	+	THE1B-int	LTR/ERVL-MaLR	2	1580	(0)	3529385
1244	21.3	1.8	0.8	chr6	149975735	149976206	(20829773)	+	L1M4	LINE/L1	5540	6028	(829)	3529455
15	9.5	13.3	0.0	chr6	149976230	149976274	(20829705)	+	(GGAGTGT)n	Simple_repeat	1	51	(0)	3529459
735	23.2	3.4	8.7	chr6	149976278	149976588	(20829391)	+	MLT2B3	LTR/ERVL	1	294	(260)	3529460
1780	15.7	4.2	0.3	chr6	150292694	150292993	(20512986)	+	MSTB	LTR/ERVL-MaLR	4	315	(111)	3529987
195	34.8	8.5	2.4	chr6	150309695	150309859	(20496120)	C	L2c	LINE/L2	(116)	3271	3096	3530014
1572	13.9	6.5	14.8	chr6	150309862	150310233	(20495746)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	3530015
342	29.7	11.8	1.9	chr6	150380549	150380754	(20425225)	C	LTR85b	LTR/Gypsy?	(36)	748	520	3530130
4562	18.1	6.0	0.9	chr6	150560014	150560865	(20245114)	+	MER54A	LTR/ERVL	1	898	(3)	3530419
9061	12.7	7.4	3.6	chr6	153855960	153857474	(16948505)	C	LTR12C	LTR/ERV1	(0)	1579	2	3535479
325	37.0	5.4	6.4	chr6	154206429	154207177	(16598802)	C	L2c	LINE/L2	(0)	3387	2655	3535948
15	22.4	6.2	1.5	chr6	154231202	154231265	(16574714)	+	A-rich	Low_complexity	1	68	(0)	3535986
1529	24.6	11.3	1.7	chr6	154231273	154231996	(16573983)	+	L1MC5a	LINE/L1	255	1057	(1720)	3535987
1636	14.0	11.4	20.7	chr6	154286864	154287153	(16518826)	+	MSTA	LTR/ERVL-MaLR	1	224	(204)	3536086
409	28.7	2.9	0.0	chr6	154537390	154537525	(16268454)	+	hAT-N1_Mam	DNA/hAT-Tip100?	112	251	(89)	3536572
4535	6.3	6.4	0.5	chr6	156421184	156421755	(14384224)	C	LTR14B	LTR/ERVK	(0)	608	1	3539422
258	35.1	8.3	2.9	chr6	157326729	157326966	(13479013)	+	Tigger16b	DNA/TcMar-Tigger	80	331	(5)	3540723
4393	5.1	5.0	1.7	chr6	158405277	158405852	(12400127)	C	LTR14B	LTR/ERVK	(0)	608	13	3542481
1575	17.8	10.6	9.3	chr6	158995895	158996093	(11809886)	C	MLT1D	LTR/ERVL-MaLR	(321)	184	8	3543502
2303	16.0	6.3	0.5	chr6	159623796	159624196	(11181783)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3544329
1321	30.7	12.7	3.7	chr6	159631269	159632137	(11173842)	C	HAL1	LINE/L1	(1548)	959	1	3544351
1812	12.0	15.9	2.2	chr6	159828002	159828329	(10977650)	C	MSTA	LTR/ERVL-MaLR	(34)	394	1	3544661
182	39.6	0.9	0.0	chr6	159899017	159899127	(10906852)	+	MIRc	SINE/MIR	114	225	(43)	3544798
4230	16.7	4.1	2.7	chr6	160732359	160733195	(10072784)	C	MER21C	LTR/ERVL	(2)	936	1	3545724
2056	20.1	1.6	0.7	chr6	161064844	161065278	(9740701)	C	MER54A	LTR/ERVL	(460)	441	3	3546178
336	28.1	5.4	8.1	chr6	161763262	161763470	(9042509)	+	MLT1O	LTR/ERVL-MaLR	330	532	(10)	3547184
11	17.3	0.0	5.6	chr6	167720102	167720137	(3085842)	+	(CTGCCT)n	Simple_repeat	1	36	(0)	3554699
2155	17.4	4.0	1.2	chr6	169034228	169034641	(1771338)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3556069
5008	4.6	4.0	0.3	chr6	169476050	169476635	(1329344)	+	LTR14B	LTR/ERVK	1	608	(0)	3556489
862	31.0	14.3	5.1	chr6	169476636	169477298	(1328681)	C	L1M5	LINE/L1	(1668)	4478	3687	3556487
1127	7.1	0.7	0.0	chr6	169479710	169479863	(1326116)	C	L1PA13	LINE/L1	(3)	6160	6006	3556493
8763	13.3	1.1	21.8	chr6	169479864	169481858	(1324121)	+	LTR12C	LTR/ERV1	3	1579	(0)	3556494
11	10.2	2.7	7.9	chr6	170032568	170032604	(773375)	+	(GAGCAG)n	Simple_repeat	1	38	(0)	3557079
226	30.5	15.5	4.4	chr7	514088	514224	(158831749)	C	MIRb	SINE/MIR	(0)	268	114	3558439
197	36.0	6.5	3.9	chr7	618223	618326	(158727647)	+	Penelope1_Vert	LINE/Penelope	948	1054	(33)	3558595
239	36.1	5.7	1.7	chr7	618355	618588	(158727385)	C	L1ME5	LINE/L1	(111)	6083	5840	3558596
3840	19.0	1.5	9.1	chr7	624711	625724	(158720249)	+	L1MC	LINE/L1	2481	3356	(2790)	3558606
3614	21.5	6.1	2.4	chr7	701327	702418	(158643555)	+	L1ME1	LINE/L1	1287	2423	(3959)	3558751
14	17.6	0.0	0.0	chr7	726723	726754	(158619219)	+	(GGTGGC)n	Simple_repeat	1	32	(0)	3558809
2333	12.9	4.2	0.0	chr7	799140	799503	(158546470)	+	MER1A	DNA/hAT-Charlie	1	380	(149)	3558902
261	13.9	0.0	0.0	chr7	799505	799540	(158546433)	+	Alu	SINE/Alu	1	36	(97)	3558903
2200	12.5	0.0	0.0	chr7	1191439	1191735	(158154238)	C	AluSp	SINE/Alu	(16)	297	1	3559465
3358	13.6	1.3	3.0	chr7	1191736	1192161	(158153812)	+	MER1A	DNA/hAT-Charlie	112	529	(0)	3559464
765	22.4	13.5	0.1	chr7	1366016	1366267	(157979706)	C	MLT1G1	LTR/ERVL-MaLR	(281)	314	31	3559774
498	32.0	11.9	3.4	chr7	1932361	1933401	(157412572)	C	HAL1	LINE/L1	(765)	1742	607	3560635
2214	11.1	0.3	1.3	chr7	2351906	2352211	(156993762)	C	AluSz	SINE/Alu	(9)	303	1	3561241
322	24.0	8.0	0.9	chr7	2352214	2352314	(156993659)	C	MLT1C	LTR/ERVL-MaLR	(283)	184	76	3561242
722	16.4	14.7	8.9	chr7	2352315	2352549	(156993424)	+	MER44A	DNA/TcMar-Tigger	1	251	(88)	3561243
1702	15.0	4.5	1.6	chr7	2462873	2463238	(156882735)	+	L1MB3	LINE/L1	5767	6143	(40)	3561464
2337	9.6	0.0	0.7	chr7	3292048	3292348	(156053625)	+	AluSc8	SINE/Alu	1	299	(12)	3563084
3591	14.0	0.4	0.0	chr7	3712071	3712597	(155633376)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	3563708
26	6.3	0.0	0.0	chr7	4345079	4345112	(155000861)	+	(T)n	Simple_repeat	1	34	(0)	3564628
535	26.9	9.8	8.9	chr7	4345123	4345514	(155000459)	+	MLT1J	LTR/ERVL-MaLR	68	463	(49)	3564629
8364	7.7	0.8	0.0	chr7	5062223	5063284	(154282689)	C	MER11C	LTR/ERVK	(0)	1071	1	3566146
943	25.3	9.8	10.7	chr7	5743276	5743740	(153602233)	+	L1ME3G	LINE/L1	349	795	(129)	3567699
1235	26.4	11.2	5.6	chr7	5743747	5744424	(153601549)	+	L1MEg	LINE/L1	475	1195	(5047)	3567702
3677	12.9	1.5	0.4	chr7	6466479	6467001	(152878972)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3569444
2271	9.8	0.3	1.0	chr7	6627817	6628123	(152717850)	+	AluSc	SINE/Alu	1	305	(4)	3569845
1806	18.0	11.6	0.5	chr7	7925787	7926161	(151419812)	+	MSTB	LTR/ERVL-MaLR	5	426	(0)	3571811
13	4.1	0.0	9.7	chr7	8261747	8261777	(151084196)	+	(GGTG)n	Simple_repeat	1	31	(0)	3572278
12	16.0	0.0	3.3	chr7	8262052	8262081	(151083892)	+	(CCCGC)n	Simple_repeat	1	30	(0)	3572279
394	22.8	7.1	12.1	chr7	13950943	13951135	(145394838)	+	Charlie8	DNA/hAT-Charlie	126	307	(24)	3579398
1607	18.2	10.1	1.6	chr7	16748586	16748965	(142597008)	+	MER54A	LTR/ERVL	1	416	(485)	3582971
10196	12.1	6.0	0.3	chr7	20208215	20209751	(139136222)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	3587445
2624	4.7	0.0	0.3	chr7	20860658	20860956	(138485017)	C	AluY	SINE/Alu	(13)	298	1	3588389
2274	22.8	6.8	2.6	chr7	21500343	21500879	(137845094)	C	MLT1E2	LTR/ERVL-MaLR	(3)	624	64	3589373
3456	11.2	0.7	0.9	chr7	21500880	21501339	(137844634)	C	LTR71A	LTR/ERV1	(0)	459	1	3589374
1640	21.9	1.5	5.4	chr7	21727754	21728159	(137617814)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3589650
1679	19.9	2.5	8.1	chr7	21728174	21728237	(137617736)	C	MLT1B-int	LTR/ERVL-MaLR	(14)	1357	1299	3589650
2286	9.5	0.0	0.3	chr7	21728238	21728558	(137617415)	C	AluSx1	SINE/Alu	(0)	312	1	3589651
2082	17.6	5.4	3.4	chr7	21822102	21822518	(137523455)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3589777
5505	15.8	4.5	1.2	chr7	21822519	21822957	(137523016)	C	L1MA4	LINE/L1	(536)	5764	5297	3589776
407	16.8	17.9	1.0	chr7	22872135	22872236	(136473737)	C	MER91C	DNA/hAT-Tip100	(17)	123	1	3591375
2017	21.7	2.0	1.8	chr7	22908672	22909093	(136436880)	+	MER77	LTR/ERVL	1	459	(145)	3591442
2353	14.8	6.8	0.0	chr7	22909094	22909492	(136436481)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3591443
2202	7.4	0.0	0.7	chr7	23642008	23642291	(135703682)	C	AluSc8	SINE/Alu	(8)	303	22	3592774
1855	17.8	9.4	1.9	chr7	23706493	23706904	(135639069)	C	MER88	LTR/ERVL	(18)	446	1	3592873
10858	10.1	1.3	2.5	chr7	23794487	23796086	(135549887)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3592989
1555	13.9	9.6	3.2	chr7	24568129	24568351	(134777622)	C	MER44A	DNA/TcMar-Tigger	(85)	254	5	3594099
4049	15.0	4.8	1.4	chr7	24882125	24883074	(134462899)	C	L1PB4	LINE/L1	(12)	6144	5146	3594524
398	16.6	13.1	1.6	chr7	25287838	25287941	(134058032)	C	MER39	LTR/ERV1	(449)	138	5	3595219
659	24.5	2.0	0.7	chr7	25288071	25288214	(134057759)	+	MLT1C	LTR/ERVL-MaLR	322	467	(0)	3595224
204	36.4	2.5	4.5	chr7	28431737	28431961	(130914012)	C	L2b	LINE/L2	(353)	3066	2838	3600054
20	7.8	0.0	0.0	chr7	28431983	28432009	(130913964)	+	(T)n	Simple_repeat	1	27	(0)	3600058
2846	5.5	0.0	0.0	chr7	28445541	28445850	(130900123)	C	AluY	SINE/Alu	(1)	310	1	3600077
1871	17.6	13.1	0.2	chr7	30181343	30181740	(129164233)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	3602750
3994	11.1	0.5	5.0	chr7	31946201	31946835	(127399138)	+	LTR14B	LTR/ERVK	3	608	(0)	3605414
2164	23.7	1.9	4.3	chr7	31946836	31947206	(127398767)	C	L1MCa	LINE/L1	(5673)	1078	636	3605413
1939	14.6	10.2	1.7	chr7	32513196	32513605	(126832368)	+	MER4B	LTR/ERV1	1	449	(161)	3606359
5634	14.7	1.8	1.2	chr7	32513608	32514433	(126831540)	C	LTR5B	LTR/ERVK	(0)	1002	167	3606360
1890	20.5	4.9	0.3	chr7	33721758	33722105	(125623868)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	3608267
410	32.1	12.3	6.1	chr7	35733683	35734268	(123611705)	C	L2c	LINE/L2	(0)	3387	2763	3611120
1149	14.8	0.0	0.0	chr7	36389365	36389526	(122956447)	C	AluJb	SINE/Alu	(14)	298	137	3612221
2416	17.2	1.7	1.0	chr7	37106206	37106610	(122239363)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3613283
369	26.6	13.1	0.6	chr7	39330392	39330565	(120015408)	C	HAL1ME	LINE/L1	(288)	2177	1979	3616378
2469	6.4	7.0	0.0	chr7	39903728	39904057	(119441916)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3617382
10989	15.2	5.1	6.5	chr7	39904058	39904637	(119441336)	+	L1MCa	LINE/L1	593	1147	(5361)	3617380
16	20.8	4.3	2.1	chr7	42264861	42264914	(117081059)	+	GA-rich	Low_complexity	1	55	(0)	3620988
2040	14.2	11.2	1.3	chr7	42950477	42950861	(116395112)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3621891
2575	23.6	9.7	4.9	chr7	43633765	43635049	(115710924)	C	L1MDa	LINE/L1	(4996)	1637	34	3622900
11435	9.8	0.9	0.2	chr7	43716136	43717703	(115628270)	+	THE1-int	LTR/ERVL-MaLR	1	1580	(0)	3623044
26312	23.2	2.4	1.9	chr7	46463467	46469613	(112876360)	C	HUERS-P3-int	LTR/ERV1	(1961)	6958	762	3627272
1045	31.4	4.8	3.2	chr7	47086090	47086644	(112259329)	+	LTR84a	LTR/ERVL	30	620	(141)	3628092
652	18.7	3.9	0.0	chr7	47228173	47228295	(112117678)	+	L1MB3	LINE/L1	6050	6177	(6)	3628257
605	25.7	9.2	0.0	chr7	55361733	55361950	(103984023)	C	MER88	LTR/ERVL	(78)	386	147	3638521
2883	19.2	4.1	5.1	chr7	55873363	55873784	(103472189)	+	MER92-int	LTR/ERV1	3180	3602	(1616)	3639401
2451	8.4	1.8	0.0	chr7	55873785	55874118	(103471855)	C	LTR14A	LTR/ERVK	(0)	344	5	3639403
2854	4.4	1.4	0.0	chr7	56928444	56928782	(102417191)	+	LTR14A	LTR/ERVK	1	344	(0)	3641414
1496	13.8	3.0	3.0	chr7	56928783	56929044	(102416929)	+	AluSx	SINE/Alu	49	310	(2)	3641413
26	4.2	8.2	0.0	chr7	58057212	58057260	(101288713)	+	(GATTCCATTC)n	Simple_repeat	1	53	(0)	3643189
1295	15.0	0.4	3.4	chr7	63647948	63648181	(95697792)	C	AluSx	SINE/Alu	(37)	275	49	3645061
2856	4.4	1.4	0.0	chr7	63648182	63648520	(95697453)	C	LTR14A	LTR/ERVK	(0)	344	1	3645062
1851	23.7	2.5	0.5	chr7	64536259	64536656	(94809317)	C	MSTB	LTR/ERVL-MaLR	(20)	406	1	3646394
483	28.9	2.0	7.5	chr7	64536657	64536788	(94809185)	+	L1MB2	LINE/L1	2860	2977	(3399)	3646380
332	25.0	6.4	6.4	chr7	65086592	65086732	(94259241)	C	Charlie4z	DNA/hAT-Charlie	(10)	157	17	3647237
326	27.6	3.5	11.1	chr7	65395353	65395482	(93950491)	C	L1MB2	LINE/L1	(3405)	2977	2860	3647778
924	24.0	0.0	0.0	chr7	65395483	65395674	(93950299)	+	MSTB	LTR/ERVL-MaLR	1	192	(234)	3647783
1572	23.8	11.6	1.4	chr7	66228936	66229117	(93116856)	C	L1ME1	LINE/L1	(1658)	6127	5895	3649574
2467	6.9	0.7	0.0	chr7	66229118	66229408	(93116565)	C	AluY	SINE/Alu	(17)	294	2	3649575
781	26.3	6.1	2.5	chr7	67004173	67004222	(92341751)	+	L2a	LINE/L2	2698	2744	(675)	3651308
1808	16.3	4.6	1.9	chr7	67004223	67004584	(92341389)	+	MSTB1	LTR/ERVL-MaLR	1	372	(60)	3651311
248	33.7	4.5	6.4	chr7	69343648	69343829	(90002144)	+	L2	LINE/L2	2489	2674	(745)	3656452
1932	19.9	0.5	4.9	chr7	69343830	69344220	(90001753)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3656453
271	30.4	2.3	9.2	chr7	70604601	70604785	(88741188)	C	MIR3	SINE/MIR	(5)	203	32	3658550
2869	3.8	0.6	0.0	chr7	71073839	71074180	(88271793)	+	LTR14A	LTR/ERVK	1	344	(0)	3659419
1801	16.9	4.6	1.9	chr7	72820464	72820825	(86525148)	C	MSTB1	LTR/ERVL-MaLR	(60)	372	1	3663133
765	23.3	6.8	2.8	chr7	72820852	72820875	(86525098)	C	L2a	LINE/L2	(701)	2718	2698	3663132
2191	15.0	7.2	1.2	chr7	73143212	73143617	(86202356)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	3663944
518	24.4	5.2	4.7	chr7	73143618	73143682	(86202291)	+	MLT1G3	LTR/ERVL-MaLR	109	175	(420)	3663943
875	15.8	3.2	1.3	chr7	73734687	73734838	(85611135)	C	AluJo	SINE/Alu	(21)	291	137	3665341
2146	15.6	10.9	1.3	chr7	74953002	74953391	(84392582)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	3668428
527	24.4	5.2	4.7	chr7	74953392	74953456	(84392517)	+	MLT1G3	LTR/ERVL-MaLR	109	175	(420)	3668427
403	33.1	7.2	6.8	chr7	74964010	74964424	(84381549)	+	L2c	LINE/L2	2915	3334	(41)	3668467
635	12.9	2.3	0.3	chr7	76303268	76303404	(83042569)	+	FLAM_C	SINE/Alu	22	166	(0)	3671828
12	21.8	0.0	6.2	chr7	76796256	76796303	(82549670)	+	(TCTCCT)n	Simple_repeat	1	48	(0)	3672763
709	21.7	16.5	3.9	chr7	77469476	77469811	(81876162)	+	MLT1B	LTR/ERVL-MaLR	4	390	(0)	3673823
329	26.1	6.6	3.4	chr7	80159139	80159285	(79186688)	C	LTR88c	LTR/Gypsy?	(459)	403	252	3677764
2059	9.9	9.6	4.4	chr7	80533159	80533570	(78812403)	C	LTR14B	LTR/ERVK	(0)	608	3	3678328
1860	19.3	6.5	1.8	chr7	81672992	81673434	(77672539)	+	MSTA1	LTR/ERVL-MaLR	1	465	(0)	3679827
4136	7.9	3.8	0.5	chr7	83263382	83263966	(76082007)	+	LTR14B	LTR/ERVK	4	608	(0)	3682034
462	37.7	8.4	1.2	chr7	85516625	85516944	(73829029)	+	LTR78B	LTR/ERV1	472	816	(480)	3684892
4449	23.0	8.1	0.3	chr7	85614238	85615218	(73730755)	+	L1PA13	LINE/L1	11	1074	(5711)	3685010
9796	13.6	2.9	0.7	chr7	85932121	85933665	(73412308)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	3685383
10430	9.3	3.5	5.8	chr7	87204309	87205924	(72140049)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	3686916
9706	17.8	3.5	0.8	chr7	87328262	87329677	(72016296)	C	LTR25-int	LTR/ERV1	(5427)	1761	319	3687051
969	29.9	7.7	2.9	chr7	93156573	93156992	(66188981)	+	LTR16E2	LTR/ERVL	93	534	(34)	3694883
14	17.0	3.0	0.0	chr7	94395583	94395615	(64950358)	+	(GAT)n	Simple_repeat	1	34	(0)	3696578
3152	11.0	9.3	0.0	chr7	94589492	94589971	(64756002)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	3696867
5915	21.2	5.5	5.3	chr7	96618962	96620793	(62725180)	C	L1M2a1	LINE/L1	(4473)	2094	1	3699624
330	15.0	4.8	0.0	chr7	97439706	97439783	(61906190)	+	L1MB4	LINE/L1	5755	5840	(604)	3700795
2561	10.9	2.7	0.5	chr7	97439784	97440188	(61905785)	C	LTR76	LTR/ERV1	(0)	675	262	3700798
3703	10.5	1.3	2.8	chr7	98523773	98524199	(60821774)	C	MER1A	DNA/hAT-Charlie	(0)	529	100	3702803
1820	18.9	7.2	7.8	chr7	99099543	99099977	(60245996)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3703961
8244	16.4	4.8	3.1	chr7	99114265	99115311	(60230662)	+	L1M4	LINE/L1	2730	3807	(2837)	3703987
1690	18.0	5.9	0.3	chr7	99115312	99115600	(60230373)	+	AluJb	SINE/Alu	1	306	(6)	3703989
588	24.2	4.6	4.6	chr7	100276780	100276844	(59069129)	C	MLT1G3	LTR/ERVL-MaLR	(420)	175	109	3706219
2351	15.6	8.1	0.0	chr7	100276845	100277241	(59068732)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3706222
12	24.4	4.0	1.9	chr7	100887809	100887858	(58458115)	+	(GCCCA)n	Simple_repeat	1	52	(0)	3707581
2424	7.1	8.2	0.0	chr7	102905915	102906240	(56439733)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3711923
6430	10.3	2.4	1.9	chr7	102906241	102906926	(56439047)	C	L1MA1	LINE/L1	(4298)	3267	2570	3711922
10286	6.4	12.0	0.1	chr7	103033377	103034766	(56311207)	C	LTR12C	LTR/ERV1	(0)	1579	3	3712111
273	40.8	0.0	0.0	chr7	104884441	104884543	(54461430)	+	MER5A	DNA/hAT-Charlie	87	189	(0)	3714745
2225	29.1	5.8	3.7	chr7	106079300	106079513	(53266460)	C	L1ME3F	LINE/L1	(1915)	4231	4010	3717061
534	18.1	3.7	0.9	chr7	106079540	106079645	(53266328)	C	MLT1J	LTR/ERVL-MaLR	(318)	194	86	3717064
2052	10.3	0.0	0.0	chr7	106582199	106582470	(52763503)	+	MER4A1	LTR/ERV1	201	472	(0)	3717786
3059	23.6	6.1	1.4	chr7	106735380	106736643	(52609330)	C	L1M4c	LINE/L1	(4341)	2043	796	3717977
10757	5.4	12.6	0.1	chr7	107041503	107042881	(52303092)	C	LTR12C	LTR/ERV1	(0)	1579	3	3718507
2653	8.6	0.0	0.0	chr7	108028473	108028776	(51317197)	C	AluSx1	SINE/Alu	(8)	304	1	3719993
11122	10.4	1.2	0.2	chr7	113928892	113930455	(45415518)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3727719
2633	10.1	0.0	0.0	chr7	113930456	113930810	(45415163)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3727719
230	29.8	0.9	7.3	chr7	117238337	117238459	(42107514)	C	MamGypLTR1a	LTR/Gypsy	(19)	784	670	3732272
2052	13.0	5.3	2.5	chr7	120815302	120815665	(38530308)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3736856
1170	24.1	3.7	1.5	chr7	120843348	120843780	(38502193)	+	MER74A	LTR/ERVL	74	558	(0)	3736891
359	33.1	9.3	0.0	chr7	122412994	122413129	(36932844)	+	MIRb	SINE/MIR	1	150	(118)	3739062
426	26.8	6.0	0.7	chr7	122536699	122536841	(36809132)	C	MamRep488	DNA/hAT-Tip100	(57)	162	12	3739220
1554	11.9	3.5	0.4	chr7	122536930	122537182	(36808791)	+	L1PA13	LINE/L1	5902	6162	(1)	3739221
243	33.8	1.2	0.0	chr7	128142573	128142652	(31203321)	+	L1MEh	LINE/L1	9	89	(2146)	3746684
1154	27.1	12.1	8.3	chr7	128142747	128143524	(31202449)	+	L1MEh	LINE/L1	322	1132	(1103)	3746684
3731	10.3	3.0	1.7	chr7	129118282	129118803	(30227170)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	3748532
11297	11.0	1.0	2.9	chr7	131306267	131307928	(28038045)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	3752589
2559	15.3	1.9	1.6	chr7	131338804	131339236	(28006737)	+	Tigger2a	DNA/TcMar-Tigger	1	434	(0)	3752624
732	25.3	14.7	6.7	chr7	131454529	131454858	(27891115)	+	MLT1L	LTR/ERVL-MaLR	1	361	(249)	3752840
490	22.9	22.2	0.0	chr7	131969386	131969595	(27376378)	C	LTR50	LTR/ERVL	(2)	793	524	3753755
311	14.7	9.3	0.0	chr7	131969600	131969667	(27376306)	C	MER63D	DNA/hAT-Blackjack	(845)	216	142	3753756
634	21.7	13.4	6.4	chr7	131969670	131969965	(27376008)	C	L1MD2	LINE/L1	(2)	6357	6038	3753757
243	28.7	4.2	6.5	chr7	132550027	132550149	(26795824)	+	LTR104_Mam	LTR/Gypsy	598	717	(792)	3754561
591	29.9	6.5	5.9	chr7	132550218	132550505	(26795468)	+	LTR104_Mam	LTR/Gypsy	883	1172	(337)	3754561
1582	30.2	11.7	3.6	chr7	133295212	133296171	(26049802)	C	L4_A_Mam	LINE/RTE-X	(817)	4173	3153	3755758
1682	15.7	1.9	1.6	chr7	134804797	134805114	(24540859)	C	LTR8	LTR/ERV1	(0)	691	373	3758066
1130	27.6	7.4	3.3	chr7	134805115	134805683	(24540290)	C	HAL1	LINE/L1	(1136)	1371	778	3758065
4306	8.2	5.0	0.3	chr7	135276317	135276893	(24069080)	C	LTR14B	LTR/ERVK	(0)	608	4	3758680
1691	5.6	1.0	0.0	chr7	136037583	136037780	(23308193)	C	AluY	SINE/Alu	(15)	296	97	3760028
781	18.3	2.0	11.2	chr7	136037781	136037940	(23308033)	C	MSTB	LTR/ERVL-MaLR	(230)	196	51	3760027
2318	8.8	2.6	0.0	chr7	136037941	136038234	(23307739)	C	AluSq	SINE/Alu	(11)	302	1	3760029
1906	10.2	9.1	4.6	chr7	136260544	136260957	(23085016)	C	LTR14B	LTR/ERVK	(0)	608	3	3760371
5181	6.8	0.3	0.1	chr7	136263699	136264395	(23081578)	C	HERVK14-int	LTR/ERVK	(5398)	698	1	3760372
2351	9.7	5.1	2.7	chr7	136264396	136264819	(23081154)	C	LTR14B	LTR/ERVK	(0)	608	1	3760372
2588	18.4	6.5	0.2	chr7	138314926	138315414	(21030559)	C	MER21B	LTR/ERVL	(23)	845	324	3763339
2781	3.9	1.2	0.3	chr7	138339205	138339537	(21006436)	+	LTR14A	LTR/ERVK	9	344	(0)	3763399
31349	6.3	0.6	0.4	chr7	138339538	138343412	(21002561)	+	HERVK14-int	LTR/ERVK	1	3883	(2213)	3763399
2777	5.9	1.2	0.0	chr7	138345520	138345859	(21000114)	+	LTR14A	LTR/ERVK	1	344	(0)	3763402
979	25.6	4.6	3.1	chr7	138345860	138346229	(20999744)	C	MLT1H1	LTR/ERVL-MaLR	(204)	387	9	3763397
247	32.1	6.0	3.1	chr7	138900337	138900497	(20445476)	C	CR1_Mam	LINE/CR1	(882)	1322	1157	3764515
2253	16.0	5.3	0.2	chr7	138900555	138900962	(20445011)	+	MSTB1	LTR/ERVL-MaLR	1	430	(2)	3764516
6179	23.4	5.2	5.8	chr7	139114381	139116488	(20229485)	C	ERV3-16A3_I-int	LTR/ERVL	(1534)	3692	1600	3764950
1198	28.6	5.9	2.3	chr7	139229241	139229816	(20116157)	+	Charlie9	DNA/hAT-Charlie	2155	2752	(5)	3765157
225	27.4	1.9	0.0	chr7	139229855	139229905	(20116068)	C	MER102b	DNA/hAT-Charlie	(289)	52	1	3765158
331	15.6	3.8	1.3	chr7	139861796	139861873	(19484100)	C	MLT1D	LTR/ERVL-MaLR	(106)	399	320	3766322
199	33.8	0.0	1.5	chr7	140539285	140539350	(18806623)	C	MIR3	SINE/MIR	(4)	204	140	3767711
434	28.4	9.4	3.2	chr7	141312072	141312260	(18033713)	+	L2c	LINE/L2	2278	2479	(940)	3769095
3289	16.2	4.7	3.4	chr7	141377787	141378413	(17967560)	C	L1MD3	LINE/L1	(0)	7995	7360	3769197
6905	11.0	1.2	2.2	chr7	141751126	141752103	(17593870)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3769774
507	27.8	2.7	2.3	chr7	144275972	144276192	(15069781)	C	L1ME4b	LINE/L1	(70)	822	601	3772978
558	28.2	2.7	2.3	chr7	144373444	144373664	(14972309)	+	L1ME4b	LINE/L1	601	822	(70)	3773127
3483	7.6	12.9	1.7	chr7	145171529	145172064	(14173909)	+	LTR14B	LTR/ERVK	4	608	(0)	3774278
489	18.2	2.5	17.6	chr7	145172065	145172219	(14173754)	+	MER112	DNA/hAT-Charlie	31	160	(101)	3774277
362	28.4	17.9	0.0	chr7	145997151	145997333	(13348640)	C	L2a	LINE/L2	(0)	3426	3204	3775329
790	33.2	5.0	4.5	chr7	145997465	145998001	(13347972)	C	L2a	LINE/L2	(278)	3148	2609	3775329
2370	6.8	6.1	0.3	chr7	149612728	149613051	(9732922)	+	LTR14A	LTR/ERVK	1	344	(0)	3780936
641	5.4	0.0	0.0	chr7	149613063	149613136	(9732837)	C	tRNA-Cys-TGY	tRNA	(1)	74	1	3780937
700	27.7	9.7	0.0	chr7	150069065	150069324	(9276649)	C	Charlie4a	DNA/hAT-Charlie	(220)	288	1	3781520
3070	12.6	5.3	0.4	chr7	150456951	150457437	(8888536)	C	MER9a3	LTR/ERVK	(0)	512	1	3782106
1079	19.6	10.3	0.0	chr7	151777339	151777609	(7568364)	+	MSTB1	LTR/ERVL-MaLR	1	302	(130)	3784030
18	23.4	4.0	3.9	chr7	151877458	151877532	(7468441)	+	(CGC)n	Simple_repeat	1	78	(0)	3784167
603	9.6	0.0	0.0	chr7	152733288	152733370	(6612603)	+	AluSx	SINE/Alu	2	84	(228)	3785876
3155	14.1	2.8	6.4	chr7	152733373	152733982	(6611991)	C	LTR10E	LTR/ERV1	(21)	612	22	3785877
241	27.3	6.5	5.9	chr7	154031061	154031212	(5314761)	C	LTR85c	LTR/Gypsy?	(198)	625	473	3787754
699	27.7	9.7	0.0	chr7	154031340	154031599	(5314374)	+	Charlie4a	DNA/hAT-Charlie	1	288	(220)	3787755
399	35.4	1.2	1.2	chr7	155473895	155474013	(3871960)	C	MIR	SINE/MIR	(40)	222	103	3789676
1299	25.9	4.9	1.6	chr7	155523710	155524140	(3821833)	+	MLT1C	LTR/ERVL-MaLR	6	451	(16)	3789739
486	20.3	9.2	1.4	chr7	156639458	156639597	(2706376)	+	L1MEc	LINE/L1	37	188	(6212)	3791164
11411	9.9	0.9	0.2	chr7	156860499	156862068	(2483905)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3791452
1318	27.8	6.2	0.9	chr7	157239110	157239570	(2106403)	+	L1ME3A	LINE/L1	5646	6132	(41)	3792111
3979	16.3	3.0	3.8	chr7	157447325	157448009	(1897964)	C	L1MB3	LINE/L1	(10)	6173	5483	3792485
16	0.0	3.9	3.7	chr7	158151565	158151590	(1194383)	+	(GTG)n	Simple_repeat	1	27	(0)	3793030
811	27.3	16.3	0.2	chr7	158694286	158694703	(651270)	+	L1MC4	LINE/L1	7119	7616	(426)	3793553
759	21.9	6.2	0.0	chr8	519433	519628	(144619008)	C	L1MB2	LINE/L1	(19)	6753	6545	3794901
865	16.0	25.4	0.8	chr8	519630	519874	(144618762)	C	LTR38C	LTR/ERV1	(0)	711	406	3794902
877	24.2	4.7	8.4	chr8	2472261	2472610	(142666026)	+	MLT2B2	LTR/ERVL	221	554	(0)	3796839
2415	21.9	2.5	3.3	chr8	6475178	6476072	(138662564)	C	MER54B	LTR/ERVL	(62)	839	1	3802124
712	25.0	8.8	3.6	chr8	6685488	6685950	(138452686)	+	MLT1H2	LTR/ERVL-MaLR	2	537	(42)	3802441
954	22.6	1.3	0.0	chr8	6779876	6780105	(138358531)	+	L1PB4	LINE/L1	5923	6155	(1)	3802580
12	12.0	3.7	0.0	chr8	6791427	6791453	(138347183)	+	GA-rich	Low_complexity	1	28	(0)	3802601
3844	23.9	3.6	3.3	chr8	7049240	7050466	(138088170)	C	L1M1	LINE/L1	(4159)	3406	2078	3802923
276	32.1	9.2	5.0	chr8	8155561	8155842	(136982794)	C	L2c	LINE/L2	(75)	3312	3018	3804257
1983	14.9	0.0	0.0	chr8	8432861	8433141	(136705495)	C	AluSx	SINE/Alu	(15)	297	17	3804709
477	22.8	4.9	2.9	chr8	8433174	8433313	(136705323)	+	MER5A	DNA/hAT-Charlie	47	189	(0)	3804710
23	16.3	4.2	0.0	chr8	8453548	8453595	(136685041)	+	(TA)n	Simple_repeat	1	50	(0)	3804748
2606	5.6	0.0	0.0	chr8	8453828	8454130	(136684506)	+	AluY	SINE/Alu	2	304	(7)	3804749
277	36.0	4.7	3.5	chr8	8686963	8687192	(136451444)	+	L2b	LINE/L2	3027	3259	(116)	3805153
2002	19.9	6.6	0.2	chr8	9981706	9982103	(135156533)	C	MSTB	LTR/ERVL-MaLR	(0)	426	2	3807388
431	30.6	2.3	3.4	chr8	9982118	9982293	(135156343)	+	LTR67B	LTR/ERVL	1	174	(446)	3807389
1791	20.7	0.3	0.0	chr8	10034213	10034502	(135104134)	+	AluJr	SINE/Alu	1	291	(21)	3807477
5372	12.8	3.4	3.2	chr8	10034503	10035329	(135103307)	+	L1PB3	LINE/L1	5324	6154	(0)	3807474
16	18.6	6.1	0.0	chr8	10054373	10054421	(135084215)	+	(CCGCCCG)n	Simple_repeat	1	52	(0)	3807508
13	25.6	5.5	2.6	chr8	10054401	10054473	(135084163)	+	(CCGCTG)n	Simple_repeat	1	77	(0)	3807509
2246	18.1	2.0	2.4	chr8	10089573	10090031	(135048605)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	3807563
2195	15.1	5.1	7.7	chr8	11171392	11171770	(133966866)	+	MSTB1	LTR/ERVL-MaLR	1	394	(38)	3809197
306	40.5	4.4	0.0	chr8	11717427	11717579	(133421057)	C	MIRb	SINE/MIR	(99)	169	10	3810047
9156	8.2	13.9	0.6	chr8	11794623	11795989	(133342647)	+	LTR12C	LTR/ERV1	1	1579	(0)	3810165
732	23.3	16.9	1.4	chr8	11805607	11805885	(133332751)	+	MER46C	DNA/TcMar-Tigger	8	338	(0)	3810186
1325	17.7	11.7	9.0	chr8	11807811	11808255	(133330381)	C	MER31B	LTR/ERV1	(0)	661	1	3810189
13	25.3	2.0	2.0	chr8	11808347	11808395	(133330241)	+	G-rich	Low_complexity	1	50	(0)	3810190
1096	28.7	5.5	9.2	chr8	11938627	11939448	(133199188)	+	L1MEd	LINE/L1	601	1389	(5714)	3810414
399	20.2	7.7	0.0	chr8	11979768	11979851	(133158785)	+	THE1D	LTR/ERVL-MaLR	1	91	(290)	3810496
507	34.9	5.0	1.7	chr8	11979857	11980145	(133158491)	C	L2	LINE/L2	(567)	2852	2554	3810497
212	28.3	1.6	0.0	chr8	12509811	12509870	(132628766)	+	L2	LINE/L2	3022	3082	(337)	3811131
5430	11.4	3.5	2.1	chr8	12562363	12563040	(132575596)	C	L1PB1	LINE/L1	(0)	6151	5475	3811207
1907	18.1	0.7	0.0	chr8	12594292	12594601	(132544035)	+	AluJo	SINE/Alu	1	312	(0)	3811270
2726	12.4	5.7	3.4	chr8	12594602	12594926	(132543710)	+	L1MA8	LINE/L1	5951	6288	(3)	3811269
731	28.4	6.6	5.4	chr8	12955694	12956024	(132182612)	C	LTR67B	LTR/ERVL	(13)	607	273	3811888
629	24.7	4.8	4.1	chr8	12956051	12956244	(132182392)	C	LTR67B	LTR/ERVL	(313)	190	1	3811888
199	27.1	10.1	3.6	chr8	13238879	13238989	(131899647)	C	L2b	LINE/L2	(12)	3363	3245	3812357
3938	10.5	1.0	0.5	chr8	13299862	13300444	(131838192)	+	L1PA10	LINE/L1	5571	6156	(12)	3812461
570	24.5	2.6	8.3	chr8	13300467	13300671	(131837965)	C	LTR33	LTR/ERVL	(318)	197	5	3812460
4012	9.5	4.6	0.3	chr8	16499343	16499921	(128638715)	+	LTR14B	LTR/ERVK	4	608	(0)	3816843
572	22.4	0.0	7.5	chr8	16499922	16500000	(128638636)	C	L1MA7	LINE/L1	(91)	6200	6130	3816842
10181	9.7	5.5	1.6	chr8	16759546	16761061	(128377575)	C	LTR12C	LTR/ERV1	(0)	1579	2	3817200
1210	19.7	1.6	0.0	chr8	17906954	17907202	(127231434)	+	MER58B	DNA/hAT-Charlie	79	331	(10)	3818927
364	21.3	2.6	11.7	chr8	17907211	17907444	(127231192)	C	LTR14A	LTR/ERVK	(46)	298	181	3818928
1500	24.6	1.0	3.0	chr8	18102391	18102497	(127036139)	C	L1MA9	LINE/L1	(307)	7446	7337	3819189
2192	15.3	8.6	1.5	chr8	18102498	18102894	(127035742)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3819191
1953	16.3	1.9	1.1	chr8	18125238	18125596	(127013040)	C	MSTB	LTR/ERVL-MaLR	(61)	365	4	3819219
343	23.3	14.1	1.6	chr8	18385209	18385400	(126753236)	C	L1MCa	LINE/L1	(4690)	1727	1508	3819559
621	27.4	7.2	1.1	chr8	18385464	18385813	(126752823)	C	ERV3-16A3_LTR	LTR/ERVL	(13)	409	1	3819562
935	35.6	15.4	0.9	chr8	19100577	19101649	(126036987)	C	L2	LINE/L2	(1972)	1447	192	3820649
5225	18.0	7.5	1.7	chr8	19228555	19229513	(125909123)	C	LTR28	LTR/ERV1	(0)	1020	1	3820872
3382	13.1	4.7	0.0	chr8	19393828	19394331	(125744305)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3821147
2194	16.2	5.1	1.5	chr8	19506542	19506941	(125631695)	+	MSTB1	LTR/ERVL-MaLR	15	429	(3)	3821312
214	21.0	16.2	3.1	chr8	21421782	21421845	(123716791)	+	L2c	LINE/L2	3298	3383	(4)	3824389
634	23.2	5.3	2.4	chr8	22955144	22955266	(122183370)	+	L1M5	LINE/L1	5195	5329	(833)	3827101
3396	11.9	7.8	1.0	chr8	23038818	23039310	(122099326)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3827250
246	26.0	4.0	0.0	chr8	23072643	23072715	(122065921)	C	L1MEc	LINE/L1	(6141)	259	184	3827301
637	34.2	13.0	0.3	chr8	23474005	23474347	(121664289)	C	L3	LINE/CR1	(7)	4092	3700	3827984
225	25.0	0.0	0.0	chr8	23474523	23474582	(121664054)	+	L2	LINE/L2	200	259	(3160)	3827985
310	28.7	10.9	0.0	chr8	23531340	23531461	(121607175)	+	MIRc	SINE/MIR	39	175	(93)	3828101
2233	11.2	12.2	0.6	chr8	25093206	25093545	(120045091)	+	MER1A	DNA/hAT-Charlie	145	529	(0)	3830482
2217	16.8	3.8	7.5	chr8	25711478	25711862	(119426774)	C	MSTB	LTR/ERVL-MaLR	(0)	426	58	3831549
909	16.9	0.0	0.0	chr8	25711863	25711992	(119426644)	C	AluJo	SINE/Alu	(180)	132	3	3831550
845	23.1	5.0	9.7	chr8	26350704	26350871	(118787765)	C	L1M5	LINE/L1	(766)	5396	5231	3832591
808	16.4	0.0	2.2	chr8	26350872	26351005	(118787631)	+	FLAM_C	SINE/Alu	3	133	(10)	3832594
845	23.0	5.0	9.7	chr8	26351006	26351217	(118787419)	C	L1M5	LINE/L1	(916)	5230	5036	3832591
433	30.7	5.4	0.1	chr8	27915692	27915855	(117222781)	+	MIR3	SINE/MIR	42	208	(0)	3835203
866	30.5	9.9	5.5	chr8	28004469	28004765	(117133871)	C	L3	LINE/CR1	(793)	3306	2986	3835370
3529	8.0	5.4	16.7	chr8	28090517	28090664	(117047972)	+	LTR66	LTR/ERVL	430	610	(0)	3835534
2583	10.0	3.8	7.7	chr8	28090665	28090899	(117047737)	C	MER4D1	LTR/ERV1	(200)	700	480	3835532
3484	14.0	0.9	2.6	chr8	28095883	28096417	(117042219)	+	MER1A	DNA/hAT-Charlie	4	529	(0)	3835546
3453	15.4	11.5	2.2	chr8	28226633	28227322	(116911314)	+	LTR27C	LTR/ERV1	5	767	(0)	3835735
1864	16.7	5.0	2.4	chr8	28523775	28524143	(116614493)	+	MSTD	LTR/ERVL-MaLR	18	396	(0)	3836331
1977	16.4	0.0	0.0	chr8	28669927	28670219	(116468417)	+	AluSz6	SINE/Alu	1	293	(19)	3836652
1833	16.5	12.9	5.8	chr8	28670334	28670847	(116467789)	C	MLT2B4	LTR/ERVL	(0)	556	1	3836653
2468	14.4	0.7	10.2	chr8	30026064	30026536	(115112100)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3838894
8876	18.4	3.4	2.8	chr8	30026537	30027246	(115111390)	+	L1MB5	LINE/L1	5058	5780	(864)	3838889
9476	10.1	12.3	0.1	chr8	33573724	33575106	(111563530)	+	LTR12C	LTR/ERV1	5	1579	(0)	3844793
4449	7.2	3.8	0.2	chr8	35931386	35931971	(109206665)	C	LTR14B	LTR/ERVK	(0)	608	1	3848226
4847	8.6	1.6	1.8	chr8	38022167	38023283	(107115353)	C	MER11A	LTR/ERVK	(0)	1266	1	3851461
1312	19.5	5.0	4.7	chr8	38069685	38069980	(107068656)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	161	3851583
559	16.1	17.6	10.5	chr8	38069986	38070125	(107068511)	+	AluJr	SINE/Alu	135	297	(15)	3851584
3035	12.4	5.2	0.0	chr8	38095130	38095580	(107043056)	+	MER9a3	LTR/ERVK	37	512	(0)	3851625
2512	9.0	1.9	0.6	chr8	38095581	38095939	(107042697)	+	THE1C-int	LTR/ERVL-MaLR	1217	1580	(0)	3851623
462	25.7	11.5	5.1	chr8	38924383	38924746	(106213890)	C	LTR16A2	LTR/ERVL	(52)	443	3	3853211
265	37.5	9.3	0.6	chr8	41324572	41324748	(103813888)	C	MIRb	SINE/MIR	(15)	253	60	3856805
363	34.2	0.7	7.9	chr8	41706310	41706428	(103432208)	+	MIR3	SINE/MIR	44	159	(49)	3857459
762	17.0	23.7	0.6	chr8	41706429	41706600	(103432036)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	3857460
363	34.2	0.7	7.9	chr8	41706601	41706645	(103431991)	+	MIR3	SINE/MIR	160	196	(12)	3857459
677	28.7	5.5	0.0	chr8	42119456	42119643	(103018993)	C	LTR33	LTR/ERVL	(306)	209	11	3858168
472	20.6	3.7	1.5	chr8	43124334	43124466	(102014170)	C	L1M1	LINE/L1	(4085)	3481	3346	3860154
279	18.0	3.9	0.0	chr8	43124467	43124516	(102014120)	C	5S	rRNA	(59)	62	11	3860157
3971	12.4	2.5	4.8	chr8	43124520	43125207	(102013429)	C	LTR76	LTR/ERV1	(3)	672	1	3860158
3396	11.9	9.6	3.4	chr8	43565163	43565729	(101572907)	+	LTR14B	LTR/ERVK	3	608	(0)	3860619
1217	18.7	1.8	2.8	chr8	43565730	43567839	(101570797)	C	GSATX	Satellite/centr	(47)	2087	1	3860620
1454	16.2	0.8	0.4	chr8	46373479	46391801	(98746835)	C	GSAT	Satellite/centr	(70)	18399	1	3860839
2583	16.9	4.2	2.5	chr8	52806115	52806623	(92332013)	C	LTR61	LTR/ERV1	(0)	559	42	3868711
278	22.7	12.3	1.5	chr8	53957649	53957778	(91180858)	+	MER5A	DNA/hAT-Charlie	39	184	(5)	3870207
19	3.2	0.0	5.4	chr8	53957853	53957864	(91180772)	+	(AAAAAC)n	Simple_repeat	1	11	(0)	3870208
2229	9.6	3.5	0.7	chr8	53957865	53958166	(91180470)	+	AluSx1	SINE/Alu	1	311	(1)	3870209
1358	24.5	11.1	4.3	chr8	55906947	55907556	(89231080)	+	L1ME2	LINE/L1	5476	6143	(21)	3873174
2441	27.5	18.7	1.5	chr8	56688187	56689526	(88449110)	C	L2a	LINE/L2	(696)	2723	1100	3874294
2459	20.2	3.1	1.9	chr8	58202884	58203417	(86935219)	+	MLT2B3	LTR/ERVL	13	553	(1)	3876285
213	26.6	0.0	2.1	chr8	58318791	58318844	(86819792)	+	L2c	LINE/L2	3236	3315	(72)	3876427
3060	12.2	5.4	8.8	chr8	60499319	60499918	(84638718)	+	LTR14B	LTR/ERVK	17	594	(14)	3879250
280	30.6	7.5	0.0	chr8	60499901	60499998	(84638638)	+	MLT1H2	LTR/ERVL-MaLR	54	159	(330)	3879252
6204	11.3	4.0	0.8	chr8	63145648	63146610	(81992026)	C	HERVH48-int	LTR/ERV1	(5215)	1439	445	3882802
29	0.0	0.0	0.0	chr8	67343821	67343847	(77794789)	+	(GCG)n	Simple_repeat	1	27	(0)	3889097
17	24.9	1.2	6.2	chr8	67343866	67343945	(77794691)	+	(CGCGG)n	Simple_repeat	1	81	(0)	3889098
428	29.9	8.5	1.0	chr8	69182969	69183164	(75955472)	C	L2a	LINE/L2	(259)	3167	2956	3891647
203	34.7	1.7	0.8	chr8	69183295	69183413	(75955223)	C	L2c	LINE/L2	(247)	3140	3021	3891648
333	33.7	9.4	4.0	chr8	70983999	70984320	(74154316)	C	MamGypLTR1a	LTR/Gypsy	(16)	766	426	3894604
419	31.7	8.2	5.8	chr8	70984354	70984661	(74153975)	C	MamGypLTR1a	LTR/Gypsy	(463)	321	6	3894604
214	33.7	1.0	3.9	chr8	71214343	71214444	(73924192)	+	L2c	LINE/L2	3045	3143	(244)	3894953
1033	23.2	6.8	4.6	chr8	73449183	73449553	(71689083)	C	MLT1B	LTR/ERVL-MaLR	(10)	380	1	3898003
4495	16.0	2.9	1.5	chr8	74173855	74174404	(70964232)	C	LTR8B	LTR/ERV1	(16)	804	243	3899313
4137	23.7	9.3	5.8	chr8	74328487	74330893	(70807743)	+	ERV3-16A3_I-int	LTR/ERVL	2727	5221	(5)	3899522
1138	27.5	11.7	0.0	chr8	74581435	74581889	(70556747)	+	LTR33	LTR/ERVL	1	515	(0)	3899847
2263	23.2	3.0	0.6	chr8	75322924	75323562	(69815074)	+	L1MC4a	LINE/L1	7128	7796	(86)	3900804
7097	15.7	0.7	2.1	chr8	77339477	77340660	(67797976)	+	MSTA-int	LTR/ERVL-MaLR	1	1167	(464)	3903388
3602	10.2	1.5	2.0	chr8	82206226	82206776	(62931860)	+	LTR14	LTR/ERVK	1	548	(0)	3910345
386	38.0	2.5	3.5	chr8	82206777	82206918	(62931718)	C	MIRb	SINE/MIR	(97)	171	32	3910344
2055	18.0	0.8	0.0	chr8	85657204	85657569	(59481067)	+	HSMAR2	DNA/TcMar-Mariner	6	374	(928)	3914923
2813	18.1	3.2	0.2	chr8	85657566	85658086	(59480550)	+	HSMAR2	DNA/TcMar-Mariner	543	1079	(223)	3914924
19246	9.9	0.2	0.5	chr8	85770823	85774484	(59364152)	C	L1PA5	LINE/L1	(2)	6152	2507	3915003
19215	9.9	0.2	0.5	chr8	85798291	85801952	(59336684)	C	L1PA5	LINE/L1	(2)	6152	2507	3915039
608	5.1	0.0	0.0	chr8	86065528	86065605	(59073031)	+	L1PA11	LINE/L1	6095	6172	(2)	3915429
14517	15.3	1.5	1.8	chr8	88456209	88459863	(56678773)	+	L1PA12	LINE/L1	1	4479	(3662)	3918649
925	20.4	1.1	0.0	chr8	92601854	92602029	(52536607)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	3924042
15	13.9	0.0	0.0	chr8	92875189	92875212	(52263424)	+	(CA)n	Simple_repeat	1	24	(0)	3924436
304	32.7	3.2	2.9	chr8	92875240	92875501	(52263135)	+	L1MC4	LINE/L1	4102	4365	(1843)	3924433
1757	13.2	5.3	3.4	chr8	93640733	93641027	(51497609)	+	AluJr	SINE/Alu	1	301	(11)	3925529
2046	15.4	7.6	0.3	chr8	93660983	93661372	(51477264)	+	MSTA	LTR/ERVL-MaLR	8	428	(0)	3925567
1092	24.4	3.8	5.5	chr8	93876015	93876340	(51262296)	C	MLT1B	LTR/ERVL-MaLR	(69)	321	2	3925974
12	12.0	3.7	0.0	chr8	94474885	94474911	(50663725)	+	(CCTC)n	Simple_repeat	1	28	(0)	3926895
1408	21.3	8.1	0.9	chr8	95894655	95895093	(49243543)	C	MLT2F	LTR/ERVL	(141)	522	1	3929440
2334	27.7	7.2	5.6	chr8	96735582	96736564	(48402072)	C	ERV3-16A3_I-int	LTR/ERVL	(1347)	3879	2880	3930744
2934	11.4	11.0	7.0	chr8	97821343	97821909	(47316727)	C	LTR14B	LTR/ERVK	(0)	608	17	3932526
1753	18.8	4.0	3.1	chr8	98670514	98671053	(46467583)	+	LTR27B	LTR/ERV1	1	636	(0)	3934002
2190	11.9	0.3	0.3	chr8	100475237	100475539	(44663097)	C	AluSx1	SINE/Alu	(9)	303	1	3936858
1851	22.8	3.9	3.7	chr8	100475540	100475602	(44663034)	+	MLT1D	LTR/ERVL-MaLR	443	505	(0)	3936857
1866	24.4	4.5	2.8	chr8	100580357	100580857	(44557779)	+	MLT1J	LTR/ERVL-MaLR	3	512	(0)	3937027
1634	28.6	12.4	10.6	chr8	101098228	101099222	(44039414)	+	L2a	LINE/L2	620	1635	(1784)	3938141
1441	25.6	8.6	2.2	chr8	102731086	102731672	(42406964)	+	L2a	LINE/L2	2795	3417	(9)	3940992
543	30.6	14.8	2.3	chr8	102748723	102749154	(42389482)	C	L2c	LINE/L2	(557)	2862	2368	3941030
3739	10.9	0.8	0.0	chr8	102993225	102993712	(42144924)	+	MER1A	DNA/hAT-Charlie	38	529	(0)	3941548
2455	5.7	0.0	4.4	chr8	106851963	106852278	(38286358)	C	AluY	SINE/Alu	(8)	303	2	3947172
9779	13.2	3.9	0.4	chr8	107078149	107079673	(38058963)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3947458
484	27.8	11.0	6.9	chr8	108739527	108739814	(36398822)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	246	3949810
2012	8.1	8.5	4.9	chr8	108739815	108740225	(36398411)	C	LTR14B	LTR/ERVK	(2)	606	1	3949811
290	28.1	3.3	1.1	chr8	118510534	118510623	(26628013)	+	MER91C	DNA/hAT-Tip100	26	117	(23)	3963438
10412	12.9	1.6	2.4	chr8	121841401	121843043	(23295593)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3968973
3364	9.7	4.2	2.5	chr8	122533773	122534258	(22604378)	+	MER1A	DNA/hAT-Charlie	35	529	(0)	3970038
3854	20.0	5.0	0.8	chr8	123172164	123172678	(21965958)	+	MER45B	DNA/hAT-Tip100	1	548	(492)	3971317
1821	17.6	1.6	1.4	chr8	123193603	123193965	(21944671)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	2	3971363
321	27.1	13.2	1.9	chr8	123193966	123193995	(21944641)	C	L1ME4a	LINE/L1	(169)	5955	5918	3971362
813	30.1	5.8	8.6	chr8	123829348	123829721	(21308915)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	200	3972628
336	21.9	0.0	0.0	chr8	124272140	124272203	(20866433)	C	MER91C	DNA/hAT-Tip100	(76)	64	1	3973421
385	24.2	17.0	0.0	chr8	125669731	125669862	(19468774)	C	MIRb	SINE/MIR	(73)	195	37	3976151
21	16.1	0.0	0.0	chr8	125669984	125669989	(19468647)	+	(TTTCTT)n	Simple_repeat	1	43	(0)	3976152
22	15.3	0.0	0.0	chr8	125669990	125670026	(19468610)	+	(T)n	Simple_repeat	1	37	(0)	3976153
276	29.2	2.2	1.1	chr8	127761007	127761096	(17377540)	+	MER5A	DNA/hAT-Charlie	69	159	(30)	3980018
327	33.2	5.2	2.7	chr8	129932731	129932990	(15205646)	+	HERVL40-int	LTR/ERVL	17	283	(5247)	3983976
1521	26.6	8.2	4.9	chr8	129933021	129933594	(15205042)	+	HERVL40-int	LTR/ERVL	916	1527	(4003)	3983976
854	28.4	14.2	3.1	chr8	130446551	130447004	(14691632)	+	LTR16E1	LTR/ERVL	16	528	(10)	3985045
741	25.4	0.6	1.1	chr8	130513815	130513993	(14624643)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	3985231
19	4.3	0.0	0.0	chr8	130882070	130882093	(14256543)	+	(GT)n	Simple_repeat	1	24	(0)	3985933
16	0.0	0.0	0.0	chr8	130882119	130882136	(14256500)	+	(T)n	Simple_repeat	1	18	(0)	3985934
548	25.9	17.3	8.3	chr8	131939821	131940241	(13198395)	C	L2a	LINE/L2	(48)	3378	2912	3987663
1109	17.9	2.5	7.8	chr8	132227362	132227616	(12911020)	+	MLT1B	LTR/ERVL-MaLR	150	390	(0)	3988161
16583	9.6	1.1	0.2	chr8	133795805	133798920	(11339716)	+	L1PA8A	LINE/L1	2978	6119	(12)	3991216
1035	8.9	6.0	2.5	chr8	133798939	133799112	(11339524)	+	THE1D	LTR/ERVL-MaLR	200	381	(0)	3991215
4595	14.1	1.8	0.6	chr8	137012519	137013221	(8125415)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	869	3996541
3088	6.2	7.3	0.0	chr8	137013222	137013641	(8124995)	C	LTR14B	LTR/ERVK	(1)	607	155	3996542
3934	20.6	3.1	3.5	chr8	139574459	139575294	(5563342)	+	MER54A	LTR/ERVL	2	834	(67)	4000553
10866	6.7	7.8	3.3	chr8	140489575	140491079	(4647557)	C	LTR12C	LTR/ERV1	(0)	1579	2	4002068
221	33.2	16.1	3.6	chr8	140787866	140788087	(4350549)	+	L2b	LINE/L2	3110	3364	(11)	4002592
245	31.9	3.1	0.0	chr8	141507953	141508046	(3630590)	C	MIRc	SINE/MIR	(142)	126	30	4003723
1768	30.4	5.0	5.1	chr8	141887982	141889587	(3249049)	+	L1ME3Cz	LINE/L1	4037	5636	(666)	4004264
769	25.6	1.7	0.4	chr8	141889611	141889838	(3248798)	C	MER20B	DNA/hAT-Charlie	(31)	752	522	4004265
530	28.4	8.9	3.9	chr8	142631863	142632096	(2506540)	C	MLT1F2	LTR/ERVL-MaLR	(20)	540	294	4005122
37	0.0	0.0	0.0	chr8	142632098	142632129	(2506507)	+	(AC)n	Simple_repeat	1	32	(0)	4005123
2487	25.8	7.6	1.7	chr8	143773977	143775321	(1363315)	+	L1MD2	LINE/L1	4911	6354	(5)	4006652
1936	14.2	4.3	10.4	chr8	144779123	144779595	(359041)	+	LTR14B	LTR/ERVK	166	608	(0)	4008086
839	14.3	5.4	0.7	chr8	144779596	144779736	(358900)	C	AluJb	SINE/Alu	(164)	148	1	4008085
38896	12.5	3.5	2.6	chr8	144863370	144865878	(272758)	C	LTR46-int	LTR/ERV1	(2945)	4040	1462	4008220
1678	25.0	6.5	5.1	chr8	144926269	144926934	(211702)	+	L1MC4a	LINE/L1	6153	6828	(1054)	4008322
27602	5.5	0.2	0.1	chr8	145028836	145032160	(106476)	+	HERVK14C-int	LTR/ERVK	4106	7434	(0)	4008437
4562	6.1	4.8	0.0	chr8	145032161	145032719	(105917)	+	LTR14C	LTR/ERVK	1	587	(0)	4008437
1980	27.5	1.4	3.0	chr9	2483220	2483863	(135910854)	+	L1MC4	LINE/L1	6462	7095	(947)	4012172
10547	16.2	1.6	3.8	chr9	2507468	2509632	(135885085)	C	L1MC3	LINE/L1	(17)	7768	5653	4012223
6139	10.3	1.4	2.2	chr9	2555449	2556057	(135838660)	+	L1PA12	LINE/L1	4636	5239	(907)	4012289
4275	7.6	4.1	0.3	chr9	2556058	2556639	(135838078)	C	LTR14B	LTR/ERVK	(0)	608	4	4012291
210	28.1	4.1	0.0	chr9	3527354	3527433	(134867284)	+	MIR3	SINE/MIR	76	155	(53)	4013736
5585	18.3	1.6	0.9	chr9	5408146	5409153	(132985564)	+	THE1D-int	LTR/ERVL-MaLR	52	1066	(565)	4016422
4030	21.4	4.4	4.0	chr9	6034158	6035568	(132359149)	+	L1PA13	LINE/L1	12	1567	(5218)	4017447
37184	19.1	1.2	2.1	chr9	6080644	6087331	(132307386)	+	HERVI-int	LTR/ERV1	1144	7769	(16)	4017508
2247	17.7	5.6	1.7	chr9	7844832	7845240	(130549477)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	4020315
1910	29.5	1.7	1.0	chr9	12378182	12378767	(126015950)	+	MER90a	LTR/ERV1	1	590	(24)	4026172
7404	20.6	4.8	4.5	chr9	12783852	12785961	(125608756)	C	L1MA3	LINE/L1	(5091)	2474	8	4026717
2180	17.3	4.9	0.7	chr9	12808859	12809266	(125585451)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	4026760
8120	19.1	7.5	7.3	chr9	12809267	12810528	(125584189)	C	L1MCa	LINE/L1	(5285)	1223	11	4026758
955	15.9	5.9	4.2	chr9	15970809	15971025	(122423692)	+	L1PA16	LINE/L1	5944	6164	(2)	4031293
3803	7.5	1.0	0.6	chr9	20170214	20170734	(118223983)	C	LTR10G	LTR/ERV1	(0)	523	1	4037491
399	20.3	0.0	0.0	chr9	20423462	20423530	(117971187)	+	MER2B	DNA/TcMar-Tigger	6	74	(262)	4037857
1529	15.9	11.1	1.4	chr9	20423531	20423807	(117970910)	+	AluJo	SINE/Alu	1	307	(5)	4037858
4424	31.3	9.0	7.9	chr9	21774868	21775298	(116619419)	C	L2a	LINE/L2	(368)	3051	2587	4039685
1095	28.0	9.6	4.9	chr9	21905937	21906698	(116488019)	+	L1MEd	LINE/L1	486	1287	(5799)	4039846
6361	12.4	6.1	2.8	chr9	22019879	22021844	(116372873)	C	L1PA13	LINE/L1	(19)	8139	6094	4040005
807	7.8	12.2	0.0	chr9	22230657	22230785	(116163932)	+	L1PA11	LINE/L1	1936	2082	(4271)	4040299
2094	9.1	9.6	4.3	chr9	22230786	22231197	(116163520)	C	LTR14B	LTR/ERVK	(0)	608	1	4040300
9659	5.7	12.6	3.6	chr9	27092473	27093900	(111300817)	+	LTR12C	LTR/ERV1	3	1578	(1)	4046640
12171	8.8	0.5	0.0	chr9	33339528	33341100	(105053617)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4055240
605	23.1	11.0	0.0	chr9	33511237	33511422	(104883295)	C	L1M5	LINE/L1	(1890)	4256	4048	4055590
395	24.4	7.5	2.3	chr9	34404141	34404316	(103990401)	+	L1ME3G	LINE/L1	513	698	(226)	4057376
23	13.6	0.0	5.6	chr9	34596955	34597008	(103797709)	+	G-rich	Low_complexity	1	54	(0)	4057655
14292	13.1	1.9	1.2	chr9	34853851	34857749	(103536968)	C	L1PA10	LINE/L1	(2567)	3894	8	4058023
362	34.8	6.6	5.1	chr9	36032023	36032320	(102362397)	C	MamGypLTR2b	LTR/Gypsy	(513)	555	106	4059818
523	27.3	7.3	6.8	chr9	36892733	36893101	(101501616)	+	L1ME4b	LINE/L1	512	882	(10)	4061650
235	29.5	2.1	7.8	chr9	37053848	37053950	(101340767)	+	MIRb	SINE/MIR	103	199	(69)	4061955
9938	10.9	3.9	6.6	chr9	37563321	37564947	(100829770)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	4062940
2306	12.1	7.1	0.3	chr9	37564948	37565302	(100829415)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4062940
1798	16.2	13.8	2.6	chr9	38182282	38182661	(100212056)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	4	4064098
1536	19.3	1.1	4.6	chr9	38182662	38182996	(100211721)	C	L1MB8	LINE/L1	(40)	6138	5816	4064097
347	20.2	9.9	1.8	chr9	38559845	38559955	(99834762)	C	MSTA	LTR/ERVL-MaLR	(250)	178	58	4064810
13	16.4	0.0	5.3	chr9	38559960	38559997	(99834720)	+	(CCCCCCA)n	Simple_repeat	1	38	(0)	4064811
361	24.7	1.0	0.0	chr9	38560001	38560097	(99834620)	C	MSTA	LTR/ERVL-MaLR	(328)	100	3	4064810
6230	21.6	4.1	1.9	chr9	38560097	38561663	(99833054)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	28	4064810
967	21.0	7.0	13.5	chr9	39935844	39936362	(98458355)	C	LTR25-int	LTR/ERV1	(6205)	886	195	4066809
2604	15.6	0.8	0.2	chr9	41526766	41527164	(96867553)	+	MER61D	LTR/ERV1	1	401	(100)	4068730
946	21.0	5.9	11.6	chr9	41527165	41527683	(96867034)	+	LTR25-int	LTR/ERV1	195	886	(6205)	4068731
2498	15.7	9.7	1.1	chr9	41616135	41616153	(96778564)	+	LTR22E	LTR/ERVK	1	19	(488)	4068825
3487	12.8	8.6	5.5	chr9	41616154	41616806	(96777911)	C	LTR76	LTR/ERV1	(0)	675	1	4068826
373	31.0	14.7	3.8	chr9	42282097	42282435	(96112282)	+	L2b	LINE/L2	2960	3341	(34)	4069815
2510	17.3	6.7	5.0	chr9	42300471	42301029	(96093688)	C	LTR48	LTR/ERV1	(0)	787	219	4069850
967	20.9	6.5	12.2	chr9	62314358	62314876	(76079841)	+	LTR25-int	LTR/ERV1	195	886	(6205)	4073070
966	32.3	8.0	4.6	chr9	69648667	69649429	(68745288)	+	L2	LINE/L2	2213	3003	(416)	4081896
1841	14.7	15.9	0.3	chr9	69685490	69685850	(68708867)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4081954
196	31.9	20.6	1.1	chr9	69916279	69916937	(68477780)	C	L2	LINE/L2	(339)	3080	2260	4082320
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
4227	27.8	9.4	9.8	chr9	70421948	70423141	(67971576)	+	L2a	LINE/L2	598	1924	(1495)	4083116
41	0.0	0.0	0.0	chr9	72570231	72570265	(65824452)	+	(GT)n	Simple_repeat	1	35	(0)	4086800
2262	14.2	4.9	1.2	chr9	73162912	73163325	(65231392)	C	MSTB1	LTR/ERVL-MaLR	(2)	430	1	4087689
1120	12.1	2.5	1.9	chr9	75164100	75164323	(63230394)	+	LTR14B	LTR/ERVK	411	608	(0)	4090655
5532	20.4	7.8	3.8	chr9	75164324	75168223	(63226494)	C	L1MB4	LINE/L1	(2484)	4263	6	4090651
77	8.8	0.0	0.0	chr9	76175202	76175310	(62219407)	+	(GAATG)n	Simple_repeat	1	109	(0)	4092041
20	6.9	0.0	0.0	chr9	76175311	76175341	(62219376)	+	(AGAAC)n	Simple_repeat	1	31	(0)	4092042
6066	16.9	3.0	2.0	chr9	76432666	76433782	(61960935)	+	LTR28C	LTR/ERV1	1	1129	(0)	4092534
1304	20.9	3.2	6.4	chr9	77297297	77297654	(61097063)	C	L1MEc	LINE/L1	(6021)	379	34	4094095
614	28.1	11.9	2.1	chr9	79017347	79017610	(59377107)	C	LTR16E1	LTR/ERVL	(36)	502	247	4096597
9887	11.7	4.2	5.3	chr9	79751335	79752514	(58642203)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	371	4097700
300	29.0	5.8	0.0	chr9	79762102	79762232	(58632485)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	374	4097716
1219	30.3	7.8	5.4	chr9	79981397	79982118	(58412599)	+	LTR101_Mam	LTR/ERVL	1	741	(88)	4098030
2527	23.5	5.1	3.1	chr9	81480966	81481888	(56912829)	C	L1ME3A	LINE/L1	(9)	6164	5218	4099955
512	26.3	4.3	0.0	chr9	83940623	83940778	(54453939)	C	MER102b	DNA/hAT-Charlie	(164)	177	15	4103787
2344	17.8	1.9	1.2	chr9	85070568	85070988	(53323729)	C	MSTB	LTR/ERVL-MaLR	(2)	424	1	4105669
70927	5.1	0.5	0.0	chr9	86148447	86156796	(52237921)	C	HERV9-int	LTR/ERV1	(0)	8436	49	4107408
8891	17.6	4.1	0.5	chr9	86192597	86194188	(52200529)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	4107467
2471	14.8	5.2	2.6	chr9	86194189	86194603	(52200114)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	4107467
234	33.7	8.4	3.3	chr9	86602587	86602767	(51791950)	+	MIR3	SINE/MIR	12	202	(6)	4108157
217	28.6	9.3	3.1	chr9	86605377	86605506	(51789211)	+	MIR3	SINE/MIR	67	205	(3)	4108164
2388	8.0	0.3	0.0	chr9	86738096	86738384	(51656333)	C	AluSx4	SINE/Alu	(19)	291	2	4108380
437	24.8	5.2	8.8	chr9	86738385	86738434	(51656283)	+	LTR33	LTR/ERVL	469	515	(0)	4108379
1793	16.1	4.4	3.3	chr9	87227630	87227963	(51166754)	+	MER44A	DNA/TcMar-Tigger	1	338	(1)	4109134
2456	13.8	5.4	0.2	chr9	87319313	87319718	(51074999)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4109285
689	29.0	9.5	1.5	chr9	89120278	89120715	(49274002)	+	L1ME3G	LINE/L1	1	380	(544)	4112118
6319	16.3	5.7	4.0	chr9	89120745	89121285	(49273432)	C	Ricksha	DNA/MULE-MuDR	(0)	3246	2704	4112119
516	13.9	6.1	1.0	chr9	89374539	89374649	(49020068)	+	LTR33A	LTR/ERVL	393	602	(18)	4112440
4610	15.0	2.0	3.6	chr9	89516828	89517064	(48877653)	C	L1PA15	LINE/L1	(1)	6164	5935	4112587
464	30.7	5.5	0.5	chr9	89617685	89617890	(48776827)	+	LTR33A	LTR/ERVL	63	279	(241)	4112738
30	16.2	0.0	0.0	chr9	90455730	90455785	(47938932)	+	(TATT)n	Simple_repeat	1	56	(0)	4113845
2075	17.9	5.6	0.8	chr9	91077054	91077430	(47317287)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4114667
18382	25.4	3.9	3.5	chr9	92072527	92078223	(46316494)	+	HERVH-int	LTR/ERV1	596	6213	(1500)	4116167
10333	9.7	1.8	7.4	chr9	92545064	92546735	(45847982)	+	LTR12C	LTR/ERV1	3	1579	(0)	4116890
226	27.4	19.1	0.6	chr9	93824835	93824992	(44569725)	C	MER91A	DNA/hAT-Tip100	(0)	196	3	4118613
614	21.7	11.6	1.9	chr9	95726257	95726411	(42668306)	C	MER103C	DNA/hAT-Charlie	(117)	180	9	4121640
423	27.3	8.0	1.3	chr9	95773518	95773669	(42621048)	+	MIRc	SINE/MIR	102	264	(4)	4121722
229	18.8	5.5	2.8	chr9	95779008	95779078	(42615639)	C	UCON55	DNA/TcMar-Tigger	(64)	128	56	4121733
283	31.4	16.8	2.1	chr9	95792875	95793212	(42601505)	+	L2	LINE/L2	1869	2266	(1153)	4121764
507	24.0	19.6	0.8	chr9	97009126	97009389	(41385328)	+	L1M5	LINE/L1	3319	3644	(2502)	4123843
1919	16.3	6.1	8.3	chr9	97009391	97009571	(41385146)	+	MSTB	LTR/ERVL-MaLR	2	164	(262)	4123844
1395	13.1	11.2	0.0	chr9	97009572	97009792	(41384925)	C	AluSz	SINE/Alu	(9)	303	55	4123845
3974	7.2	5.3	0.2	chr9	101123434	101124003	(37270714)	C	LTR14B	LTR/ERVK	(0)	608	8	4131207
5032	7.8	1.1	0.1	chr9	101126585	101127275	(37267442)	C	HERVK14-int	LTR/ERVK	(5398)	698	1	4131207
4229	8.9	3.8	0.2	chr9	101127276	101127858	(37266859)	C	LTR14B	LTR/ERVK	(0)	608	4	4131207
1533	24.3	7.4	0.0	chr9	107275034	107275473	(31119244)	+	L2a	LINE/L2	2578	3052	(367)	4140344
673	34.3	8.4	1.2	chr9	109560418	109560993	(28833724)	+	LTR101_Mam	LTR/ERVL	162	782	(47)	4144760
509	30.3	3.5	2.6	chr9	110087714	110087924	(28306793)	C	L2a	LINE/L2	(0)	3426	3174	4145656
4312	10.5	2.4	1.1	chr9	110088007	110088632	(28306085)	C	MER51A	LTR/ERV1	(0)	634	1	4145657
955	34.0	4.7	2.7	chr9	113062933	113063595	(25331122)	+	L1MA9	LINE/L1	5622	6298	(14)	4150944
976	34.5	1.3	3.2	chr9	113073827	113074443	(25320274)	+	L1MA7	LINE/L1	5622	6226	(65)	4150956
976	34.5	1.3	3.2	chr9	113079274	113079890	(25314827)	+	L1MA7	LINE/L1	5622	6226	(65)	4150962
961	34.7	1.3	3.2	chr9	113084716	113085332	(25309385)	+	L1MA7	LINE/L1	5622	6226	(65)	4150968
1568	23.7	9.0	5.5	chr9	113604939	113605072	(24789645)	C	MLT1J	LTR/ERVL-MaLR	(389)	123	2	4151997
283	25.0	3.5	17.6	chr9	113605135	113605183	(24789534)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	460	4151999
2021	9.1	4.2	0.7	chr9	113605184	113605457	(24789260)	+	AluSz	SINE/Alu	1	284	(28)	4152000
410	31.2	5.4	0.6	chr9	114230015	114230172	(24164545)	C	MIR	SINE/MIR	(57)	205	40	4153224
456	29.9	1.2	3.0	chr9	114915584	114915752	(23478965)	+	MIRc	SINE/MIR	59	224	(44)	4154653
480	18.8	0.0	0.0	chr9	114915783	114915862	(23478855)	C	MADE1	DNA/TcMar-Mariner	(0)	80	1	4154654
43	23.1	4.2	0.0	chr9	121473941	121473987	(16920730)	+	GA-rich	Low_complexity	1	122	(0)	4167045
35	6.2	8.6	1.3	chr9	121473988	121474057	(16920660)	+	A-rich	Low_complexity	1	76	(0)	4167046
432	28.7	4.4	0.0	chr9	121540358	121540486	(16854231)	C	L4_A_Mam	LINE/RTE-X	(195)	4795	4661	4167210
1979	24.8	16.3	3.0	chr9	123282930	123283822	(15110895)	+	L2	LINE/L2	1538	2572	(847)	4170397
3703	15.4	2.2	8.0	chr9	124070810	124071226	(14323491)	C	L1MB2	LINE/L1	(347)	5824	5441	4171839
2280	11.4	0.7	0.3	chr9	124071227	124071533	(14323184)	C	AluSq2	SINE/Alu	(5)	308	1	4171841
716	18.7	10.3	0.0	chr9	124188540	124188678	(14206039)	+	MER63B	DNA/hAT-Blackjack	282	436	(0)	4172110
1911	17.2	1.5	8.1	chr9	126798884	126799318	(11595399)	C	MLT1A1	LTR/ERVL-MaLR	(2)	406	1	4177086
437	29.2	9.6	4.0	chr9	126799319	126799440	(11595277)	C	L1M5	LINE/L1	(3512)	2634	2487	4177081
1365	32.3	8.2	6.7	chr9	127313783	127314774	(11079943)	C	LTR81C	LTR/Gypsy	(142)	1011	1	4177984
338	35.7	4.8	0.0	chr9	127529166	127529305	(10865412)	+	MIR	SINE/MIR	23	169	(93)	4178414
2277	10.2	1.3	0.3	chr9	127529358	127529662	(10865055)	+	AluSx1	SINE/Alu	2	309	(3)	4178415
2154	13.2	0.0	1.9	chr9	127657844	127658160	(10736557)	C	AluSz	SINE/Alu	(1)	311	1	4178754
17	10.7	0.0	0.0	chr9	127877746	127877775	(10516942)	+	(AGGG)n	Simple_repeat	1	30	(0)	4179227
347	33.3	6.7	1.6	chr9	127877885	127878067	(10516650)	C	MIRc	SINE/MIR	(12)	256	64	4179228
578	27.3	10.1	0.0	chr9	127921496	127921682	(10473035)	+	MIRb	SINE/MIR	26	233	(35)	4179339
11	20.8	0.0	2.9	chr9	129112091	129112125	(9282592)	+	(CCTCCT)n	Simple_repeat	1	35	(0)	4182106
1243	26.5	7.9	2.8	chr9	129293101	129293341	(9101376)	C	L1MD2	LINE/L1	(217)	6142	5885	4182511
874	12.8	0.0	0.0	chr9	129938991	129939107	(8455610)	C	AluSq2	SINE/Alu	(26)	287	171	4183938
324	31.7	11.2	3.4	chr9	130086582	130086787	(8307930)	C	MIRb	SINE/MIR	(42)	226	3	4184299
1205	22.3	5.1	1.2	chr9	130786031	130786352	(7608365)	C	MER74B	LTR/ERVL	(77)	545	211	4185794
12	16.3	7.0	2.2	chr9	130939493	130939535	(7455182)	+	(GCGTCC)n	Simple_repeat	1	46	(0)	4186048
245	36.4	0.8	3.6	chr9	130995667	130995803	(7398914)	C	MIR3	SINE/MIR	(13)	195	63	4186157
3098	14.3	5.1	5.5	chr9	131537389	131537919	(6856798)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	4187244
297	29.7	6.5	0.0	chr9	132180555	132180655	(6214062)	+	MIR3	SINE/MIR	68	175	(33)	4188378
18	21.8	0.0	0.0	chr9	132180679	132180721	(6213996)	+	GA-rich	Low_complexity	1	43	(0)	4188379
249	32.4	4.7	0.0	chr9	133972749	133972850	(4421867)	C	MIRc	SINE/MIR	(75)	193	87	4191336
12	13.3	5.7	2.7	chr9	134385676	134385710	(4009007)	+	(CCAGG)n	Simple_repeat	1	37	(0)	4191965
434	34.6	5.2	4.1	chr9	134861713	134862077	(3532640)	+	MLT1J2	LTR/ERVL-MaLR	21	389	(59)	4192479
359	28.3	0.9	1.7	chr9	134896994	134897108	(3497609)	+	MER5B	DNA/hAT-Charlie	2	115	(63)	4192515
70	21.4	5.8	0.0	chr9	135069437	135069641	(3325076)	+	G-rich	Low_complexity	1	217	(0)	4192725
626	26.6	3.2	5.7	chr9	135326537	135326763	(3067954)	C	MER96B	DNA/hAT-Tip100	(0)	417	197	4193053
2646	27.9	6.3	5.9	chr9	135569519	135570259	(2824458)	C	L1M5	LINE/L1	(2482)	3664	2946	4193385
2576	5.4	0.0	0.0	chr9	135932090	135932386	(2462331)	C	AluY	SINE/Alu	(14)	297	1	4193808
1846	9.1	6.6	0.0	chr9	136438011	136438264	(1956453)	+	AluSx1	SINE/Alu	1	272	(40)	4194377
27	0.0	6.1	0.0	chr9	136545985	136546017	(1848700)	+	(CGCGCCC)n	Simple_repeat	1	35	(0)	4194481
11824	10.8	1.2	1.2	chr9	136558806	136560122	(1834595)	+	MSTA-int	LTR/ERVL-MaLR	3	1329	(302)	4194491
14	14.1	5.8	5.5	chr9	136676199	136676250	(1718467)	+	(CCAGGC)n	Simple_repeat	1	55	(0)	4194630
2261	13.0	11.9	1.6	chr9	136751810	136752192	(1642525)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4194753
197	34.6	4.8	5.1	chr9	137068547	137068699	(1326018)	+	MIR3	SINE/MIR	33	188	(80)	4195186
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
11849	8.9	0.8	1.4	chr9	137400779	137401147	(993570)	C	THE1A-int	LTR/ERVL-MaLR	(231)	1349	982	4195585
2511	7.2	0.0	0.7	chr9	137401148	137401454	(993263)	C	AluY	SINE/Alu	(6)	305	1	4195588
2263	9.3	0.0	0.0	chr9	137467629	137467917	(926800)	+	AluSz6	SINE/Alu	14	302	(10)	4195660
8328	16.6	5.6	4.8	chr9	137944040	137945826	(448891)	C	HERV4_I-int	LTR/ERV1	(2416)	2599	522	4196362
4037	18.2	8.1	4.4	chrX	10388193	10389025	(145651870)	+	MER21B	LTR/ERVL	1	866	(2)	4376415
1282	24.1	5.6	5.4	chrX	12058016	12058475	(143982420)	C	LTR48B	LTR/ERV1	(183)	461	1	4378958
443	29.2	15.7	1.2	chrX	13419618	13419873	(142621022)	C	LTR84b	LTR/ERVL	(0)	761	462	4381131
576	25.0	5.6	0.6	chrX	14029401	14029569	(142011326)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	4382165
1415	20.6	6.6	1.5	chrX	14566519	14566919	(141473976)	+	MER54B	LTR/ERVL	1	430	(471)	4382912
4358	6.4	4.9	2.7	chrX	15731289	15731882	(140309013)	C	LTR14B	LTR/ERVK	(0)	608	1	4384860
1243	9.4	5.9	3.0	chrX	16904687	16904750	(139136145)	+	L1MA4	LINE/L1	6041	6104	(196)	4386955
2311	13.5	6.3	4.5	chrX	16904751	16904944	(139135951)	+	MSTB	LTR/ERVL-MaLR	1	197	(229)	4386956
2125	12.5	0.3	0.7	chrX	16904945	16905241	(139135654)	+	AluSx3	SINE/Alu	1	296	(15)	4386957
1100	15.7	1.1	0.0	chrX	18377652	18377823	(137663072)	+	AluJo	SINE/Alu	137	310	(2)	4389387
415	23.4	8.3	1.6	chrX	18377952	18378088	(137662807)	C	LTR50	LTR/ERVL	(506)	195	43	4389388
17	20.2	2.1	2.1	chrX	20067416	20067462	(135973433)	+	(ATC)n	Simple_repeat	1	48	(0)	4392473
878	28.6	6.7	4.8	chrX	22097196	22097629	(133943266)	C	MLT1L	LTR/ERVL-MaLR	(8)	602	72	4395479
244	35.9	11.4	4.8	chrX	24859090	24859668	(131181227)	+	L2c	LINE/L2	2668	3314	(73)	4400244
760	29.3	10.5	4.3	chrX	37932640	37933128	(118107767)	C	MLT1H1	LTR/ERVL-MaLR	(2)	553	31	4418184
799	16.5	0.6	1.9	chrX	39746926	39747086	(116293809)	C	MER124	DNA?	(12)	385	227	4421100
1581	25.8	11.0	1.7	chrX	39747183	39747718	(116293177)	+	MLT1L	LTR/ERVL-MaLR	1	592	(18)	4421101
875	27.9	2.4	7.8	chrX	39965018	39965414	(116075481)	C	MLT1J	LTR/ERVL-MaLR	(29)	483	109	4421540
286	21.9	4.0	3.0	chrX	39965357	39965455	(116075440)	C	LTR67B	LTR/ERVL	(468)	152	53	4421541
354	22.4	2.6	0.0	chrX	39971872	39971947	(116068948)	C	LTR67B	LTR/ERVL	(450)	170	93	4421552
235	24.7	3.8	2.5	chrX	39971886	39971964	(116068931)	C	MLT1N2	LTR/ERVL-MaLR	(385)	177	98	4421553
6253	9.5	1.4	0.9	chrX	40364238	40365668	(115675227)	C	L1PA16	LINE/L1	(11)	6155	4716	4422306
4326	10.4	2.8	10.2	chrX	40806725	40807472	(115233423)	C	LTR8	LTR/ERV1	(0)	691	1	4423112
1317	11.3	20.7	0.4	chrX	41330453	41330683	(114710212)	C	AluSz	SINE/Alu	(22)	290	1	4424159
272	31.7	13.9	2.1	chrX	41330687	41330876	(114710019)	C	MIRc	SINE/MIR	(43)	225	10	4424160
20	13.7	0.0	0.0	chrX	41333712	41333743	(114707152)	+	(A)n	Simple_repeat	1	32	(0)	4424166
472	32.6	7.7	2.7	chrX	41481470	41481765	(114559130)	C	LTR104_Mam	LTR/Gypsy	(274)	1235	924	4424507
965	22.8	3.6	0.0	chrX	41908816	41909030	(114131865)	C	MER58A	DNA/hAT-Charlie	(1)	223	1	4425223
936	18.6	3.2	1.1	chrX	41909047	41909231	(114131664)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	4425224
282	27.1	12.3	1.8	chrX	42028067	42028175	(114012720)	C	MIRb	SINE/MIR	(14)	254	133	4425403
260	22.2	3.1	0.0	chrX	42028298	42028360	(114012535)	C	MLT1N2	LTR/ERVL-MaLR	(366)	196	132	4425404
647	29.7	1.3	3.5	chrX	43692296	43692606	(112348289)	+	L1MEg	LINE/L1	362	665	(5419)	4427694
364	25.6	7.7	1.3	chrX	45039310	45039467	(111001428)	C	L1MEg	LINE/L1	(4671)	1413	1245	4430214
27	0.0	0.0	0.0	chrX	45039504	45039529	(111001366)	+	(T)n	Simple_repeat	1	26	(0)	4430215
5912	8.1	1.9	7.4	chrX	45039530	45040995	(110999900)	C	SVA_E	Retroposon/SVA	(20)	1362	422	4430216
5122	16.6	0.7	3.2	chrX	45545949	45546881	(110494014)	+	THE1D-int	LTR/ERVL-MaLR	719	1627	(4)	4430913
3916	17.0	0.9	2.5	chrX	45546870	45547481	(110493414)	C	MSTA-int	LTR/ERVL-MaLR	(908)	743	133	4430912
280	19.4	10.0	0.0	chrX	45783603	45783674	(110257221)	C	MER102c	DNA/hAT-Charlie	(136)	195	116	4431202
4382	14.8	3.1	0.4	chrX	46553841	46554532	(109486363)	C	MER50	LTR/ERV1	(23)	711	1	4432352
17	11.3	5.0	2.4	chrX	46912446	46912485	(109128410)	+	(CCG)n	Simple_repeat	1	42	(0)	4433040
488	28.4	18.2	3.0	chrX	47204845	47205181	(108835714)	C	L2a	LINE/L2	(1)	3425	3026	4433600
319	23.4	4.1	2.1	chrX	47205201	47205296	(108835599)	C	L2a	LINE/L2	(540)	2879	2782	4433600
26	2.8	5.4	0.0	chrX	50075373	50075409	(105965486)	+	(TGTATATA)n	Simple_repeat	1	39	(0)	4438819
434	26.7	0.0	4.1	chrX	50075460	50075580	(105965315)	C	MamRep1879	DNA/hAT-Tip100?	(86)	130	15	4438818
2746	17.0	4.1	6.5	chrX	53188674	53189133	(102851762)	+	MLT1F2	LTR/ERVL-MaLR	100	558	(2)	4443191
641	21.8	3.6	0.8	chrX	53189136	53189269	(102851626)	+	ERVL-E-int	LTR/ERVL	4068	4205	(1462)	4443195
305	37.9	7.3	1.3	chrX	53281744	53281973	(102758922)	C	MIRb	SINE/MIR	(23)	245	1	4443385
11763	9.9	0.9	2.3	chrX	53527134	53527870	(102513025)	+	THE1D-int	LTR/ERVL-MaLR	910	1631	(0)	4443958
2102	9.7	8.4	3.3	chrX	53527871	53528231	(102512664)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4443958
8317	20.1	6.5	1.9	chrX	55324111	55327746	(100713149)	C	L1MD1	LINE/L1	(2623)	3914	8	4447019
2919	21.6	6.9	1.7	chrX	56615380	56615708	(99425187)	C	LTR28C	LTR/ERV1	(84)	1045	706	4448367
3981	10.2	1.1	4.8	chrX	56615709	56616337	(99424558)	C	LTR14B	LTR/ERVK	(0)	608	3	4448368
16	0.0	0.0	0.0	chrX	56735946	56735962	(99304933)	+	(A)n	Simple_repeat	1	17	(0)	4448470
443	20.8	0.0	0.0	chrX	63466685	63466761	(92574134)	C	MER61A	LTR/ERV1	(264)	77	1	4450183
20750	11.8	2.6	1.5	chrX	63466764	63470472	(92570423)	C	MER61-int	LTR/ERV1	(1139)	6066	1396	4450183
1976	14.2	0.8	5.6	chrX	65823387	65823759	(90217136)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4452957
1169	6.5	0.6	0.0	chrX	65823760	65823928	(90216967)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1411	4452957
702	24.6	5.5	12.6	chrX	65823933	65824225	(90216670)	+	L1MEg	LINE/L1	171	441	(5794)	4452958
8834	10.9	2.0	0.0	chrX	67241885	67243128	(88797767)	+	THE1B-int	LTR/ERVL-MaLR	1	1270	(310)	4454625
606	30.9	9.8	6.3	chrX	68238098	68238674	(87802221)	C	L1M5	LINE/L1	(1119)	5027	4378	4455862
5036	13.1	0.2	9.3	chrX	68238675	68239553	(87801342)	C	LTR1A1	LTR/ERV1	(0)	799	1	4455863
467	36.9	13.4	3.3	chrX	69133237	69134248	(86906647)	+	L2	LINE/L2	1815	2945	(474)	4457614
576	27.1	1.4	0.0	chrX	69322604	69322747	(86718148)	+	MIR	SINE/MIR	39	184	(78)	4458036
2460	15.2	7.0	0.0	chrX	69332836	69333231	(86707664)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	4458059
10605	19.2	7.8	8.0	chrX	69333232	69333298	(86707597)	C	L1M4	LINE/L1	(963)	5784	5721	4458058
4185	25.0	1.9	2.4	chrX	69669905	69671599	(86369296)	C	L1MA9	LINE/L1	(4161)	3405	1774	4458557
993	22.1	0.0	3.2	chrX	69671613	69671864	(86369031)	C	L1MA9	LINE/L1	(6923)	643	400	4458557
476	20.2	16.2	0.0	chrX	71703210	71703338	(84337557)	+	L2	LINE/L2	2320	2473	(946)	4462080
466	16.7	18.0	0.0	chrX	71778241	71778354	(84262541)	C	L2	LINE/L2	(950)	2469	2331	4462193
2629	13.8	3.1	5.7	chrX	72220391	72220883	(83820012)	+	LTR19A	LTR/ERV1	7	486	(0)	4462919
51873	7.0	1.3	2.4	chrX	72220884	72222595	(83818300)	+	HERVFH19-int	LTR/ERV1	1	1703	(6016)	4462919
9569	12.5	6.2	3.9	chrX	73905284	73906794	(82134101)	+	THE1B-int	LTR/ERVL-MaLR	3	1550	(81)	4464895
23618	12.7	3.1	2.6	chrX	75964498	75968551	(80072344)	C	HERVH48-int	LTR/ERV1	(1395)	5259	1186	4467137
5147	14.1	1.8	0.2	chrX	75968542	75969401	(80071494)	C	HERVH48-int	LTR/ERV1	(5780)	874	1	4467137
16101	16.5	2.5	1.0	chrX	77467132	77469851	(78571044)	+	L1M1	LINE/L1	15	2777	(4788)	4468359
9545	18.4	5.2	1.6	chrX	79761447	79763095	(76277800)	C	L1PA15	LINE/L1	(5004)	1859	5	4471160
7937	17.4	2.4	2.0	chrX	80431820	80432633	(75608262)	C	LTR25-int	LTR/ERV1	(6367)	821	1	4471824
463	26.0	0.9	0.0	chrX	81761564	81761667	(74279228)	C	MER81	DNA/hAT-Blackjack	(1)	113	9	4473173
13453	15.6	1.2	1.0	chrX	82237349	82237473	(73803422)	C	L1PA12	LINE/L1	(5184)	2357	2239	4473673
3735	9.6	8.8	0.4	chrX	82237474	82238017	(73802878)	C	LTR4	LTR/ERV1	(2)	594	1	4473675
1399	18.7	3.4	10.4	chrX	83065638	83066020	(72974875)	C	MLT2B3	LTR/ERVL	(195)	359	5	4474493
2822	3.8	0.0	1.4	chrX	83066021	83066369	(72974526)	C	LTR14A	LTR/ERVK	(0)	344	1	4474494
1757	11.9	0.7	11.6	chrX	84309206	84309532	(71731363)	+	AluSx1	SINE/Alu	5	295	(17)	4475809
19098	12.7	3.1	1.3	chrX	84309534	84316657	(71724238)	+	L1MA1	LINE/L1	508	7721	(0)	4475810
17	5.0	0.0	0.0	chrX	84708855	84708875	(71332020)	+	(A)n	Simple_repeat	1	21	(0)	4476220
2238	15.5	7.6	0.5	chrX	85215949	85216349	(70824546)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	4476788
23311	11.7	1.8	0.6	chrX	85821002	85825814	(70215081)	+	L1PB1	LINE/L1	251	5128	(1734)	4477348
616	17.2	0.9	0.1	chrX	88481357	88481505	(67559390)	C	L1M3	LINE/L1	(367)	5807	5654	4480335
9834	6.8	11.8	0.0	chrX	88745500	88746890	(67294005)	C	LTR12C	LTR/ERV1	(0)	1579	3	4480626
40555	6.6	3.0	0.0	chrX	88842993	88848431	(67192464)	C	HERVK14-int	LTR/ERVK	(495)	5601	1	4480718
2106	10.1	10.2	2.5	chrX	88848432	88848834	(67192061)	C	LTR14B	LTR/ERVK	(0)	608	1	4480718
2650	7.8	0.0	0.0	chrX	93965801	93966144	(62074751)	+	LTR14A	LTR/ERVK	1	344	(0)	4486294
3033	24.1	3.8	5.0	chrX	93966145	93966765	(62074130)	C	L1PA17	LINE/L1	(6147)	706	78	4486286
1082	8.0	0.0	0.0	chrX	101183121	101183245	(54857650)	C	AluSx3	SINE/Alu	(11)	300	176	4495569
3025	4.4	0.3	0.0	chrX	101183246	101183588	(54857307)	C	LTR14A	LTR/ERVK	(0)	344	1	4495570
46543	4.7	0.7	0.2	chrX	101184005	101189531	(54851364)	C	HERVK14-int	LTR/ERVK	(544)	5552	1	4495572
2910	5.3	1.2	0.0	chrX	101189532	101189871	(54851024)	C	LTR14A	LTR/ERVK	(0)	344	1	4495572
5723	12.8	0.9	1.6	chrX	103118689	103119677	(52921218)	C	L1PB3	LINE/L1	(2)	6152	5163	4498084
2746	7.0	0.0	0.0	chrX	103119678	103120021	(52920874)	C	LTR14A	LTR/ERVK	(0)	344	1	4498085
259	28.7	11.8	3.0	chrX	104477046	104477214	(51563681)	C	MER5A	DNA/hAT-Charlie	(0)	189	4	4500251
1086	23.1	5.0	3.1	chrX	104966741	104967031	(51073864)	C	MER58B	DNA/hAT-Charlie	(43)	298	2	4500907
2881	28.4	6.7	4.1	chrX	104967032	104968979	(51071916)	+	L1ME3Cz	LINE/L1	2599	4620	(1526)	4500905
2430	10.0	0.0	0.0	chrX	110106374	110106673	(45934222)	C	AluSx1	SINE/Alu	(12)	300	1	4507927
2085	14.9	0.0	0.7	chrX	110904477	110904785	(45136110)	C	AluSq	SINE/Alu	(6)	307	1	4509046
5445	12.4	4.2	0.2	chrX	110904786	110905649	(45135246)	C	THE1C-int	LTR/ERVL-MaLR	(729)	902	3	4509043
281	28.6	16.7	1.5	chrX	112571159	112571360	(43469535)	+	L1ME5	LINE/L1	5833	6071	(123)	4511581
4307	15.1	1.1	2.4	chrX	113134733	113135452	(42905443)	C	MER50	LTR/ERV1	(23)	711	1	4512445
1177	6.4	3.7	0.6	chrX	114391694	114391851	(41649044)	+	L1PA4	LINE/L1	5977	6139	(16)	4514022
7519	16.7	0.3	0.2	chrX	114931813	114933001	(41107894)	C	MSTA-int	LTR/ERVL-MaLR	(1)	1630	440	4514702
11207	11.3	1.5	0.3	chrX	115203341	115204951	(40835944)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	4515086
25040	6.3	0.6	1.5	chrX	115505859	115509226	(40531669)	C	HERV9-int	LTR/ERV1	(5096)	3340	3	4515635
1736	15.3	0.4	0.8	chrX	115547396	115547663	(40493232)	C	AluJr4	SINE/Alu	(35)	277	11	4515723
31	3.0	0.0	0.0	chrX	115732929	115732962	(40307933)	+	(GGCCC)n	Simple_repeat	1	34	(0)	4516069
5065	20.7	8.9	4.0	chrX	118292528	118293073	(37747822)	+	L1MDa	LINE/L1	1181	1801	(4832)	4518918
2919	4.2	2.9	0.0	chrX	118293074	118293407	(37747488)	C	LTR14A	LTR/ERVK	(0)	344	1	4518920
3090	4.1	0.0	0.0	chrX	118300393	118300736	(37740159)	C	LTR14A	LTR/ERVK	(0)	344	1	4518920
9578	9.0	1.3	17.6	chrX	118798773	118800660	(37240235)	+	LTR12C	LTR/ERV1	2	1577	(2)	4519907
2700	5.4	2.3	0.0	chrX	119033940	119034275	(37006620)	+	LTR14A	LTR/ERVK	1	344	(0)	4520344
2022	14.3	0.7	5.0	chrX	119704710	119705031	(36335864)	+	AluJr	SINE/Alu	5	312	(0)	4521619
2353	29.7	9.1	5.8	chrX	119705032	119705911	(36334984)	C	L2c	LINE/L2	(410)	3009	2077	4521618
10264	8.0	5.1	3.8	chrX	119749839	119751393	(36289502)	C	LTR12C	LTR/ERV1	(1)	1578	3	4521744
2729	5.1	2.0	0.0	chrX	119953995	119954330	(36086565)	+	LTR14A	LTR/ERVK	2	344	(0)	4522225
14182	15.6	6.9	8.5	chrX	119954331	119954477	(36086418)	C	L1MC2	LINE/L1	(2729)	3835	3692	4522218
1085	24.9	17.3	1.1	chrX	120406644	120407087	(35633808)	C	MLT2F	LTR/ERVL	(0)	563	1	4522879
403	26.5	8.1	5.0	chrX	120479434	120479612	(35561283)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	4523006
1354	23.0	4.1	6.0	chrX	122285907	122286326	(33754569)	+	LTR56	LTR/ERV1	34	445	(0)	4525318
1085	26.2	13.3	4.8	chrX	123450600	123451218	(32589677)	C	L2a	LINE/L2	(0)	3426	2747	4526783
4459	26.2	9.6	6.1	chrX	123502503	123504514	(32536381)	+	ERV3-16A3_I-int	LTR/ERVL	95	2333	(3321)	4526854
991	9.3	7.8	4.3	chrX	125324401	125324561	(30716334)	C	AluJo	SINE/Alu	(9)	303	137	4529977
8542	13.5	10.3	1.9	chrX	125882767	125883931	(30156964)	+	THE1C-int	LTR/ERVL-MaLR	1	1306	(325)	4530556
251	31.6	8.1	2.2	chrX	129636062	129636200	(26404695)	C	MIRc	SINE/MIR	(40)	228	81	4535015
1852	15.2	3.6	1.0	chrX	130217889	130218183	(25822712)	+	AluJo	SINE/Alu	1	303	(9)	4536175
232	19.6	0.0	2.1	chrX	131300625	131300671	(24740224)	+	UCON105	Unknown	222	267	(6)	4537869
3498	14.3	2.1	0.4	chrX	131709328	131709846	(24331049)	C	MER1A	DNA/hAT-Charlie	(1)	528	1	4538377
24991	5.1	0.1	0.1	chrX	134117180	134123326	(21917569)	+	L1PA4	LINE/L1	1	6151	(4)	4542102
2337	11.6	2.5	0.3	chrX	134280647	134281000	(21759895)	+	THE1C-int	LTR/ERVL-MaLR	1270	1631	(0)	4542385
2272	13.4	0.5	4.6	chrX	134281001	134281391	(21759504)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4542385
715	28.5	4.2	5.0	chrX	135836982	135837339	(20203556)	C	LTR41	LTR/ERVL	(179)	589	235	4544942
2925	4.7	0.0	0.0	chrX	136898783	136899126	(19141769)	+	LTR14A	LTR/ERVK	1	344	(0)	4546826
2570	20.2	3.0	7.9	chrX	136899127	136899734	(19141161)	C	L1MB7	LINE/L1	(400)	5784	5196	4546824
2358	6.2	1.0	0.7	chrX	136908670	136908959	(19131936)	C	AluSx4	SINE/Alu	(13)	297	7	4546850
989	19.8	5.5	6.5	chrX	136908960	136909065	(19131830)	C	MER33	DNA/hAT-Charlie	(177)	147	35	4546848
2451	22.8	3.4	3.2	chrX	138612600	138613430	(17427465)	C	MER54A	LTR/ERVL	(2)	899	1	4549517
273	19.4	0.0	0.0	chrX	139002349	139002415	(17038480)	+	MamRep1151	LTR?	558	624	(85)	4550037
18421	16.1	2.0	0.9	chrX	139002425	139003041	(17037854)	+	L1M1	LINE/L1	496	1113	(6452)	4550038
16	15.9	0.0	0.0	chrX	139149940	139149967	(16890928)	+	(CA)n	Simple_repeat	1	28	(0)	4550281
535	27.9	5.5	3.7	chrX	139149983	139150250	(16890645)	+	Tigger15a	DNA/TcMar-Tigger	145	417	(298)	4550282
4307	12.8	1.8	0.7	chrX	139676831	139677533	(16363362)	+	MER50	LTR/ERV1	1	711	(23)	4551024
2302	17.9	10.1	2.7	chrX	141057216	141057736	(14983159)	C	LTR6A	LTR/ERV1	(0)	564	1	4553205
2302	17.9	10.1	2.7	chrX	141529676	141530196	(14510699)	+	LTR6A	LTR/ERV1	1	564	(0)	4553918
2234	15.3	0.8	1.6	chrX	143468031	143468408	(12572487)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4556603
10322	12.6	2.8	0.5	chrX	143468414	143469951	(12570944)	C	THE1C-int	LTR/ERVL-MaLR	(5)	1575	1	4556603
4710	14.1	4.9	1.9	chrX	146862451	146863326	(9177569)	C	MER4-int	LTR/ERV1	(1881)	4717	3815	4561054
306	32.9	6.2	8.3	chrX	148722522	148723191	(7317704)	+	L2c	LINE/L2	2676	3359	(16)	4563718
40735	12.3	0.7	0.3	chrX	149073916	149079939	(6960956)	+	HERVL18-int	LTR/ERVL	1	6047	(0)	4564177
217	29.9	1.3	3.8	chrX	149544763	149544842	(6496053)	+	MIRb	SINE/MIR	124	201	(67)	4564771
185	29.9	1.3	3.8	chrX	149934663	149934742	(6106153)	C	MIRb	SINE/MIR	(67)	201	124	4565172
826	21.8	1.4	5.0	chrX	150845233	150845454	(5195441)	+	L1MB5	LINE/L1	5961	6174	(0)	4566550
45	2.4	0.0	0.0	chrX	151079956	151079998	(4960897)	+	(GT)n	Simple_repeat	1	43	(0)	4567085
214	34.3	9.7	2.3	chrX	151386304	151386488	(4654407)	C	L2b	LINE/L2	(182)	3193	2998	4567547
524	32.4	8.1	6.1	chrX	151439324	151439799	(4601096)	+	L2	LINE/L2	1630	2125	(1294)	4567640
2376	17.9	3.2	0.2	chrX	151439800	151440218	(4600677)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	4567641
637	27.0	6.5	0.0	chrX	151585214	151585387	(4455508)	+	MIR	SINE/MIR	39	224	(38)	4567847
250	29.9	12.4	1.7	chrX	151585409	151585588	(4455307)	C	L2a	LINE/L2	(558)	2861	2660	4567846
6898	11.5	1.4	1.4	chrX	153049215	153050212	(2990683)	+	THE1C-int	LTR/ERVL-MaLR	583	1580	(0)	4569778
687	28.9	2.1	2.1	chrX	153471168	153471361	(2569534)	+	MIR	SINE/MIR	68	261	(1)	4570314
360	25.2	8.3	0.9	chrX	153859600	153859711	(2181184)	C	MLT1C	LTR/ERVL-MaLR	(391)	121	1	4570842
544	27.6	19.4	2.4	chrX	153859725	153860218	(2180677)	C	L2	LINE/L2	(1505)	1914	1317	4570851
2356	7.4	2.0	0.3	chrX	153923780	153924078	(2116817)	C	AluSx	SINE/Alu	(8)	304	1	4570950
4257	14.4	3.4	2.0	chrX	154708006	154708947	(1331948)	+	L1MA9	LINE/L1	6186	7148	(583)	4572294
2193	10.9	8.2	7.1	chrX	154708948	154709322	(1331573)	+	MSTA	LTR/ERVL-MaLR	1	392	(36)	4572301
7162	10.9	0.3	0.6	chrX	155983335	155983780	(57115)	+	THE1D-int	LTR/ERVL-MaLR	539	983	(648)	4574021
4241	6.2	4.8	9.2	chrX	155983781	155984418	(56477)	C	LTR14B	LTR/ERVK	(0)	608	1	4574023
1611	8.7	0.0	1.8	chrX	155986425	155986646	(54249)	C	HERVK14-int	LTR/ERVK	(5878)	218	1	4574025
4477	5.7	4.6	3.3	chrX	155986647	155987246	(53649)	C	LTR14B	LTR/ERVK	(0)	608	1	4574025
872	21.1	0.7	0.5	chrY	10648768	10649172	(46578243)	+	(CCATT)n	Simple_repeat	2	408	(0)	4587870
315	22.4	2.9	0.0	chrY	10649173	10649239	(46578176)	C	AluYj4	SINE/Alu	(18)	293	225	4587871
412	14.5	3.1	0.0	chrY	10668472	10668533	(46558882)	C	AluYj4	SINE/Alu	(24)	287	224	4587935
218	6.8	2.1	2.0	chrY	10669246	10669583	(46557832)	+	(TCCAT)n	Simple_repeat	1	345	(0)	4587940
264	22.4	0.0	0.0	chrY	10669595	10669643	(46557772)	C	AluYa8	SINE/Alu	(39)	271	223	4587941
28	0.0	0.0	0.0	chrY	10669655	10669681	(46557734)	+	(CCATT)n	Simple_repeat	1	27	(0)	4587942
73	12.0	0.0	0.0	chrY	10973565	10973692	(46253723)	+	(TCCAT)n	Simple_repeat	1	128	(0)	4588565
315	20.6	3.1	0.0	chrY	11012144	11012206	(46215209)	C	AluYj4	SINE/Alu	(23)	288	224	4588685
248	15.5	0.0	4.7	chrY	11012166	11012212	(46215203)	+	SVA_F	Retroposon/SVA	330	380	(1004)	4588686
55	32.9	1.0	0.0	chrY	11012221	11012247	(46215168)	+	(TTCCA)n	Simple_repeat	1	28	(0)	4588687
85	6.9	0.0	0.0	chrY	11012248	11012354	(46215061)	+	(CATTC)n	Simple_repeat	1	107	(0)	4588688
55	32.9	1.0	0.0	chrY	11012355	11012527	(46214888)	+	(TTCCA)n	Simple_repeat	4	177	(0)	4588689
336	24.7	0.0	0.0	chrY	11014207	11014279	(46213136)	C	AluYj4	SINE/Alu	(15)	296	224	4588696
282	16.7	0.0	4.0	chrY	11014236	11014285	(46213130)	+	SVA_C	Retroposon/SVA	333	380	(1004)	4588697
169	9.5	0.0	0.0	chrY	11014302	11014542	(46212873)	+	(CATTC)n	Satellite	1	241	(0)	4588698
276	21.9	4.5	0.0	chrY	11014543	11014606	(46212809)	C	AluSq	SINE/Alu	(22)	291	225	4588699
898	25.9	5.4	1.8	chrY	11486600	11488350	(45739065)	+	(GATTC)n	Simple_repeat	1	1823	(0)	4589332
7139	11.0	0.3	0.6	chrY	57169855	57170300	(57115)	+	THE1D-int	LTR/ERVL-MaLR	541	983	(648)	4607657
4303	6.2	4.8	9.2	chrY	57170301	57170938	(56477)	C	LTR14B	LTR/ERVK	(0)	608	1	4607659
1544	8.7	0.0	1.8	chrY	57172945	57173166	(54249)	C	HERVK14-int	LTR/ERVK	(5878)	218	1	4607661
4551	5.7	4.6	3.3	chrY	57173167	57173766	(53649)	C	LTR14B	LTR/ERVK	(0)	608	1	4607661
744	3.8	1.1	2.5	chrY	57216407	57217320	(10095)	+	(TTAGGG)n	Simple_repeat	1	924	(0)	4607726