13	16.7	4.8	2.3	chr1	1000441	1000482	(247955940)	+	G-rich	Low_complexity	1	44	(0)	1255
372	23.5	7.5	0.7	chr1	1422514	1422650	(247533772)	C	LTR75	LTR/ERVL	(294)	268	122	1721
3836	13.6	5.4	0.8	chr1	1422773	1423374	(247533048)	+	MER41B	LTR/ERV1	4	634	(0)	1722
15	20.2	10.0	3.0	chr1	1435466	1435555	(247520867)	+	(GTGC)n	Simple_repeat	1	99	(0)	1739
16	12.8	2.9	0.0	chr1	1435597	1435630	(247520792)	+	G-rich	Low_complexity	1	35	(0)	1740
19	14.9	0.0	0.0	chr1	1435695	1435731	(247520691)	+	(CGAG)n	Simple_repeat	1	37	(0)	1741
2016	12.1	2.3	1.7	chr1	1448773	1449070	(247507352)	C	AluSc8	SINE/Alu	(10)	301	2	1761
850	23.1	4.3	1.5	chr1	1449072	1449730	(247506692)	C	HERVIP10F-int	LTR/ERV1	(5834)	1903	734	1762
8217	5.2	2.0	0.5	chr1	1504966	1505957	(247450465)	C	LTR13	LTR/ERVK	(0)	1007	1	1868
13	17.1	2.3	4.5	chr1	1615445	1615487	(247340935)	+	G-rich	Low_complexity	1	44	(0)	2066
859	35.4	8.1	1.9	chr1	1960338	1961114	(246995308)	+	L1MEd	LINE/L1	197	1025	(6061)	2668
397	11.6	14.8	0.0	chr1	1989071	1989156	(246967266)	+	LTR18B	LTR/ERVL	1	101	(244)	2705
1412	13.7	11.8	0.9	chr1	1989143	1989459	(246966963)	+	LTR18B	LTR/ERVL	232	587	(27)	2705
2208	14.0	0.0	0.0	chr1	1995977	1996284	(246960138)	C	AluSx	SINE/Alu	(4)	308	1	2724
2111	14.5	11.2	1.6	chr1	2624743	2625128	(246331294)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3409
22	16.8	2.4	0.0	chr1	3314568	3314609	(245641813)	+	(TC)n	Simple_repeat	1	43	(0)	3902
12	8.8	4.2	0.0	chr1	3314702	3314725	(245641697)	+	(TCC)n	Simple_repeat	1	25	(0)	3903
2482	8.9	3.9	2.5	chr1	3575496	3575853	(245380569)	C	THE1B	LTR/ERVL-MaLR	(1)	363	1	4119
249	34.1	3.7	8.1	chr1	3775045	3775208	(245181214)	+	MIRc	SINE/MIR	9	162	(46)	4335
16	3.3	0.0	10.0	chr1	3796670	3796691	(245159731)	+	(GGGTG)n	Simple_repeat	1	19	(0)	4362
4056	13.3	0.5	8.9	chr1	3796692	3797417	(245159005)	C	MER4A	LTR/ERV1	(0)	664	1	4363
8224	6.0	1.4	0.5	chr1	3805933	3806930	(245149492)	C	LTR13	LTR/ERVK	(0)	1007	1	4376
91	4.9	0.9	0.9	chr1	3908355	3908462	(245047960)	+	(TC)n	Simple_repeat	1	109	(0)	4542
35	2.5	0.0	0.0	chr1	3908463	3908503	(245047919)	+	(AC)n	Simple_repeat	1	41	(0)	4543
673	18.2	8.1	1.2	chr1	3908504	3908664	(245047758)	C	MER77B	LTR/ERVL	(1)	699	527	4544
66	5.3	1.3	0.0	chr1	4778572	4778649	(244177773)	+	(TC)n	Simple_repeat	1	79	(0)	5803
1547	14.2	12.5	0.4	chr1	5131423	5131683	(243824739)	+	AluSx	SINE/Alu	1	297	(15)	6302
1753	17.3	2.5	12.5	chr1	5131684	5131714	(243824708)	+	MLT1A	LTR/ERVL-MaLR	164	175	(199)	6301
30	3.5	0.0	0.0	chr1	5131715	5131744	(243824678)	+	(TC)n	Simple_repeat	1	30	(0)	6303
1753	17.3	2.5	12.5	chr1	5131745	5131962	(243824460)	+	MLT1A	LTR/ERVL-MaLR	176	370	(4)	6301
49	6.0	2.9	0.0	chr1	5652992	5653060	(243303362)	+	(AG)n	Simple_repeat	1	71	(0)	7046
37	0.0	0.0	0.0	chr1	5688387	5688418	(243268004)	+	(TG)n	Simple_repeat	1	32	(0)	7094
20	0.0	0.0	0.0	chr1	5688421	5688442	(243267980)	+	(AG)n	Simple_repeat	1	22	(0)	7095
28	21.9	0.0	3.8	chr1	6554193	6554272	(242402150)	+	G-rich	Low_complexity	1	80	(0)	8454
11810	21.5	2.7	3.5	chr1	6568483	6570024	(242386398)	C	HERVFH21-int	LTR/ERV1	(5011)	1518	48	8471
31	0.0	0.0	0.0	chr1	6570025	6570051	(242386371)	+	(GA)n	Simple_repeat	1	27	(0)	8480
2295	19.4	3.5	4.9	chr1	6570052	6570109	(242386313)	C	HERVFH21-int	LTR/ERV1	(6482)	47	1	8471
636	13.8	2.7	4.0	chr1	6570110	6570283	(242386139)	C	LTR21B	LTR/ERV1	(0)	481	306	8471
12	13.7	0.0	0.0	chr1	7961691	7961714	(240994708)	+	(GCGT)n	Simple_repeat	1	24	(0)	10655
29	23.2	2.9	0.0	chr1	8169782	8169850	(240786572)	+	GA-rich	Low_complexity	1	71	(0)	11072
47	23.3	2.4	1.6	chr1	8746812	8746937	(240209485)	+	GA-rich	Low_complexity	1	129	(0)	12168
2430	5.9	3.4	0.0	chr1	8747013	8747300	(240209122)	C	AluY	SINE/Alu	(13)	298	1	12169
32	16.9	2.7	1.3	chr1	9234699	9234773	(239721649)	+	(CCCCGC)n	Simple_repeat	1	77	(0)	13219
16	18.9	0.0	0.0	chr1	9251877	9251906	(239704516)	+	(T)n	Simple_repeat	1	30	(0)	13246
278	31.9	7.8	0.8	chr1	9251974	9252093	(239704329)	+	MIRc	SINE/MIR	115	243	(25)	13247
32	4.9	0.0	0.0	chr1	9309262	9309301	(239647121)	+	(GA)n	Simple_repeat	1	40	(0)	13343
38	0.0	0.0	0.0	chr1	9309302	9309334	(239647088)	+	(GT)n	Simple_repeat	1	33	(0)	13344
1355	14.4	0.0	0.5	chr1	9309338	9309532	(239646890)	C	AluJr	SINE/Alu	(32)	280	87	13345
2415	6.6	1.0	0.7	chr1	9626623	9626924	(239329498)	+	AluSx	SINE/Alu	1	303	(9)	14015
395	23.1	5.3	0.0	chr1	9629569	9629676	(239326746)	+	MIRb	SINE/MIR	87	200	(68)	14021
2258	14.2	2.5	10.2	chr1	9763901	9764106	(239192316)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	221	14320
37	2.9	0.0	0.0	chr1	9764107	9764142	(239192280)	+	(AG)n	Simple_repeat	1	36	(0)	14321
546	24.3	13.2	0.7	chr1	9929833	9929977	(239026445)	+	MIR3	SINE/MIR	32	197	(11)	14655
2148	13.9	0.0	0.0	chr1	9950811	9951104	(239005318)	+	AluSz	SINE/Alu	5	298	(14)	14703
42	21.4	0.0	0.0	chr1	10194431	10194516	(238761906)	+	GA-rich	Low_complexity	1	86	(0)	15299
72	23.0	1.2	0.0	chr1	10699942	10700113	(238256309)	+	(GAGACA)n	Simple_repeat	1	174	(0)	16230
34	0.0	0.0	0.0	chr1	10700081	10700117	(238256305)	+	(AC)n	Simple_repeat	1	37	(0)	16231
30	7.8	0.0	0.0	chr1	10702946	10702986	(238253436)	+	(GA)n	Simple_repeat	1	41	(0)	16234
23	16.1	2.4	1.2	chr1	10734651	10734701	(238221721)	+	GA-rich	Low_complexity	1	51	(0)	16275
575	29.6	6.5	14.0	chr1	11321535	11321765	(237634657)	C	L2c	LINE/L2	(137)	3250	3020	17450
20	0.0	0.0	0.0	chr1	11321769	11321790	(237634632)	+	(CT)n	Simple_repeat	1	22	(0)	17453
255	11.8	2.1	1.3	chr1	11741551	11741609	(237214813)	+	MIR1_Amn	SINE/MIR	106	162	(106)	18357
1010	16.4	7.4	0.6	chr1	11741584	11741806	(237214616)	+	MIR	SINE/MIR	14	246	(16)	18361
19	17.3	2.6	0.0	chr1	11749229	11749267	(237207155)	+	(CT)n	Simple_repeat	1	40	(0)	18376
1818	15.3	0.3	6.2	chr1	11797293	11797612	(237158810)	C	AluJr	SINE/Alu	(11)	301	1	18475
269	30.6	0.0	1.2	chr1	11797752	11797837	(237158585)	+	L3	LINE/CR1	4008	4092	(7)	18473
666	15.7	14.2	0.0	chr1	11798281	11798395	(237158027)	C	AluJo	SINE/Alu	(177)	135	2	18476
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
52	0.0	0.0	0.0	chr1	11909549	11909596	(237046826)	+	(GCCCCGCCGT)n	Simple_repeat	1	48	(0)	18710
768	7.9	0.0	5.0	chr1	11909807	11909926	(237046496)	C	U5	snRNA	(1)	115	2	18711
12	23.8	3.0	5.9	chr1	11926473	11926538	(237029884)	+	G-rich	Low_complexity	1	68	(0)	18748
465	20.5	2.4	13.5	chr1	12075463	12075654	(236880768)	C	MLT1D	LTR/ERVL-MaLR	(274)	231	62	19088
2388	13.1	11.9	3.2	chr1	12075725	12076087	(236880335)	+	LTR19A	LTR/ERV1	1	405	(81)	19100
34	9.1	0.0	0.0	chr1	12105528	12105574	(236850848)	+	(CT)n	Simple_repeat	1	47	(0)	19170
22	0.0	0.0	0.0	chr1	12105575	12105598	(236850824)	+	(AC)n	Simple_repeat	1	24	(0)	19171
2363	10.7	0.0	0.3	chr1	12105656	12105963	(236850459)	+	AluSq2	SINE/Alu	1	307	(6)	19172
1066	9.0	0.0	0.0	chr1	12113341	12113473	(236842949)	C	AluSz	SINE/Alu	(179)	133	1	19190
160	16.9	0.0	0.0	chr1	12113485	12113768	(236842654)	+	GA-rich	Low_complexity	1	284	(0)	19191
545	25.4	8.1	2.5	chr1	12113770	12113996	(236842426)	C	MLT1G3	LTR/ERVL-MaLR	(345)	234	1	19189
26	0.0	0.0	0.0	chr1	12162958	12162982	(236793440)	+	(CATT)n	Simple_repeat	1	25	(0)	19295
19	4.3	0.0	0.0	chr1	12408318	12408341	(236548081)	+	(AG)n	Simple_repeat	1	24	(0)	19749
1978	13.4	1.4	0.4	chr1	12408387	12408663	(236547759)	C	AluJb	SINE/Alu	(31)	281	2	19750
3380	13.8	2.3	0.9	chr1	12657427	12657987	(236298435)	C	MER41E	LTR/ERV1	(0)	595	27	20189
114	12.6	2.0	1.4	chr1	12658001	12658203	(236298219)	+	(CTTT)n	Simple_repeat	1	207	(0)	20190
23	16.3	0.0	3.8	chr1	12658206	12658258	(236298164)	+	(CCCT)n	Simple_repeat	1	53	(0)	20191
1457	11.9	8.4	0.0	chr1	12696654	12696872	(236259550)	+	Tigger7	DNA/TcMar-Tigger	263	501	(1990)	20272
1053	19.0	4.3	6.4	chr1	12696865	12697128	(236259294)	C	MSTD	LTR/ERVL-MaLR	(137)	259	2	20273
37	0.0	0.0	0.0	chr1	13945680	13945711	(235010711)	+	(TG)n	Simple_repeat	1	32	(0)	22296
23	0.0	0.0	0.0	chr1	13945712	13945736	(235010686)	+	(AG)n	Simple_repeat	1	25	(0)	22297
2269	12.5	3.3	2.2	chr1	14477045	14477404	(234479018)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	23255
49	5.8	0.0	0.0	chr1	14477426	14477480	(234478942)	+	(CT)n	Simple_repeat	1	55	(0)	23256
779	15.8	7.6	0.6	chr1	14557584	14557619	(234398803)	C	MLT2B4	LTR/ERVL	(0)	556	521	23409
54	1.9	1.9	0.0	chr1	14557620	14557673	(234398749)	+	(GT)n	Simple_repeat	1	55	(0)	23410
779	15.8	7.6	0.6	chr1	14557674	14557795	(234398627)	C	MLT2B4	LTR/ERVL	(36)	520	386	23409
342	31.9	2.5	0.0	chr1	14817233	14817348	(234139074)	+	L2a	LINE/L2	3296	3414	(12)	23919
282	28.8	10.1	0.0	chr1	14817346	14817425	(234138997)	C	L2c	LINE/L2	(0)	3387	3299	23920
377	20.6	1.4	0.0	chr1	14817520	14817587	(234138835)	+	L2a	LINE/L2	3344	3412	(14)	23921
257	33.9	4.4	1.8	chr1	14892116	14892226	(234064196)	+	LFSINE_Vert	SINE/tRNA	344	457	(2)	24100
27	20.6	3.0	1.5	chr1	14892369	14892434	(234063988)	+	(TC)n	Simple_repeat	1	68	(0)	24101
64	29.3	3.5	2.4	chr1	15101098	15101385	(233855037)	+	(TTCTCT)n	Simple_repeat	1	298	(0)	24542
2682	13.8	2.5	0.2	chr1	15244826	15245247	(233711175)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	24854
1942	13.7	14.7	3.4	chr1	15245962	15246339	(233710083)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	24857
285	33.2	9.7	3.2	chr1	15345869	15346176	(233610246)	C	L3	LINE/CR1	(76)	4023	3694	25057
24	11.7	0.0	0.0	chr1	15417547	15417583	(233538839)	+	(CT)n	Simple_repeat	1	37	(0)	25205
15	29.2	0.0	3.4	chr1	15617497	15617555	(233338867)	+	G-rich	Low_complexity	1	59	(0)	25685
16	10.4	3.2	0.0	chr1	15617534	15617564	(233338858)	+	(GAGC)n	Simple_repeat	1	32	(0)	25686
21	13.9	0.0	2.3	chr1	15617628	15617670	(233338752)	+	G-rich	Low_complexity	1	43	(0)	25687
13	26.2	0.0	8.1	chr1	16176324	16176397	(232780025)	+	(TCTATT)n	Simple_repeat	1	74	(0)	26856
38	4.9	0.0	0.0	chr1	16512479	16512520	(232443902)	+	(GA)n	Simple_repeat	1	42	(0)	27672
1535	0.0	0.0	0.0	chr1	16514122	16514285	(232442137)	C	U1	snRNA	(1)	164	1	27677
6364	9.4	2.2	4.5	chr1	16640120	16640578	(232315844)	+	L1MA2	LINE/L1	5147	5609	(695)	27878
2352	11.0	0.0	0.0	chr1	16640579	16640886	(232315536)	+	AluSq	SINE/Alu	4	311	(2)	27879
2348	8.6	0.0	2.2	chr1	16640887	16641199	(232315223)	+	AluY	SINE/Alu	1	306	(5)	27880
1541	0.0	0.0	0.0	chr1	16895980	16896143	(232060279)	+	U1	snRNA	1	164	(1)	28204
508	29.9	5.3	8.7	chr1	16903668	16904000	(232052422)	+	LTR23-int	LTR/ERV1	4727	5047	(76)	28224
2329	4.2	0.3	1.4	chr1	16904026	16904310	(232052112)	C	AluYc3	SINE/Alu	(18)	282	1	28225
1328	19.8	6.2	5.9	chr1	16905464	16905857	(232050565)	+	LTR4	LTR/ERV1	200	596	(0)	28228
2779	4.4	0.0	6.3	chr1	17301715	17302081	(231654341)	+	LTR14A	LTR/ERVK	1	344	(0)	29119
1725	13.8	2.0	1.7	chr1	17302088	17302381	(231654041)	+	MSTA	LTR/ERVL-MaLR	134	428	(0)	29120
584	33.0	11.8	4.7	chr1	17440310	17440738	(231515684)	C	L2c	LINE/L2	(1)	3386	2923	29387
47	13.1	6.4	0.0	chr1	18205102	18205195	(230751227)	+	GA-rich	Low_complexity	1	100	(0)	31156
238	23.9	5.8	2.6	chr1	18205203	18205318	(230751104)	+	L1ME4a	LINE/L1	5995	6114	(10)	31157
158	28.7	1.7	1.3	chr1	18384909	18385429	(230570993)	+	GA-rich	Low_complexity	1	530	(0)	31518
2912	20.4	2.6	5.7	chr1	18421927	18422180	(230534242)	+	LTR49-int	LTR/ERV1	181	429	(7778)	31615
3179	14.4	6.5	12.3	chr1	18422181	18422855	(230533567)	+	MER41B	LTR/ERV1	2	634	(0)	31617
4506	16.1	6.3	1.3	chr1	18503919	18504847	(230451575)	+	L1MB7	LINE/L1	5175	6145	(39)	31797
2139	14.1	2.9	1.9	chr1	18504848	18505224	(230451198)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	31803
213	36.0	3.9	1.0	chr1	18895109	18895209	(230061213)	C	L2c	LINE/L2	(0)	3387	3284	32643
185	24.1	8.5	3.6	chr1	18895235	18895290	(230061132)	C	MIRc	SINE/MIR	(193)	75	17	32644
16	9.3	0.0	0.0	chr1	18906898	18906920	(230049502)	+	(TC)n	Simple_repeat	1	23	(0)	32668
27	9.8	0.0	0.0	chr1	19315709	19315752	(229640670)	+	(TCTC)n	Simple_repeat	1	44	(0)	33415
254	28.9	14.7	1.1	chr1	19315805	19315986	(229640436)	+	MIR	SINE/MIR	4	214	(48)	33416
297	21.6	4.1	15.2	chr1	19486581	19486599	(229469823)	C	L2a	LINE/L2	(143)	3244	3225	33727
20	10.7	0.0	0.0	chr1	19486686	19486715	(229469707)	+	(TC)n	Simple_repeat	1	30	(0)	33729
183	23.7	0.0	0.0	chr1	19486871	19486908	(229469514)	C	L2c	LINE/L2	(75)	3312	3275	33730
1048	22.3	5.9	5.1	chr1	19877909	19878129	(229078293)	+	LTR43B	LTR/ERV1	235	473	(99)	34704
4262	9.8	2.8	0.0	chr1	19878130	19878724	(229077698)	C	LTR9	LTR/ERV1	(0)	612	1	34706
403	32.7	3.9	5.7	chr1	20184609	20184871	(228771551)	C	L2c	LINE/L2	(1763)	1656	1399	35257
1832	13.4	6.2	2.0	chr1	20184872	20185163	(228771259)	+	AluJb	SINE/Alu	1	305	(7)	35260
193	28.0	14.5	4.1	chr1	20661974	20662096	(228294326)	+	MIR1_Amn	SINE/MIR	21	158	(72)	36285
3439	16.6	4.1	0.5	chr1	20964619	20965222	(227991200)	+	MER73	LTR/ERVL	1	627	(17)	36880
3255	15.4	3.0	4.9	chr1	21791392	21791926	(227164496)	C	MER41B	LTR/ERV1	(37)	597	73	38679
2017	9.4	0.0	0.4	chr1	21791927	21792182	(227164240)	+	AluY	SINE/Alu	1	255	(56)	38680
3255	15.4	3.0	4.9	chr1	21792183	21792255	(227164167)	C	MER41B	LTR/ERV1	(562)	72	1	38679
425	28.2	6.4	2.4	chr1	21866242	21866452	(227089970)	+	MLT1K	LTR/ERVL-MaLR	15	234	(361)	38841
336	28.8	3.6	2.2	chr1	21866537	21866671	(227089751)	+	MLT1K	LTR/ERVL-MaLR	453	589	(6)	38841
398	25.0	14.9	2.6	chr1	21915631	21915650	(227040772)	C	MIRb	SINE/MIR	(48)	220	202	38946
714	20.9	8.6	9.9	chr1	21915651	21915768	(227040654)	+	MER3	DNA/hAT-Charlie	1	133	(76)	38947
57	0.0	0.0	0.0	chr1	22254161	22254209	(226702213)	+	(GT)n	Simple_repeat	1	49	(0)	39745
44	9.1	2.8	1.4	chr1	22254210	22254281	(226702141)	+	(AG)n	Simple_repeat	1	74	(0)	39746
244	32.4	6.9	1.8	chr1	22254311	22254420	(226702002)	C	MIR3	SINE/MIR	(50)	158	43	39747
41	29.5	2.5	5.0	chr1	22342488	22342722	(226613700)	+	(AGAGAC)n	Simple_repeat	1	241	(0)	39943
399	31.7	0.0	1.4	chr1	22819040	22819183	(226137239)	+	MIR3	SINE/MIR	53	194	(14)	41012
53	0.0	0.0	0.0	chr1	22819206	22819250	(226137172)	+	(TC)n	Simple_repeat	1	45	(0)	41013
613	29.3	10.8	8.5	chr1	22873194	22873570	(226082852)	C	MLT1H	LTR/ERVL-MaLR	(127)	422	36	41142
910	26.5	15.9	3.4	chr1	22873586	22873964	(226082458)	C	MLT1J	LTR/ERVL-MaLR	(48)	464	30	41143
346	23.1	7.0	3.3	chr1	23256478	23256603	(225699819)	C	MIR3	SINE/MIR	(60)	148	25	42022
192	26.9	3.6	13.6	chr1	23256534	23256658	(225699764)	+	L2b	LINE/L2	3246	3357	(18)	42023
33	5.1	0.0	0.0	chr1	23256729	23256769	(225699653)	+	(CT)n	Simple_repeat	1	41	(0)	42024
9374	4.3	1.4	17.7	chr1	23256771	23258418	(225698004)	+	SVA_C	Retroposon/SVA	1	1377	(7)	42025
285	19.1	4.2	1.4	chr1	23558779	23558847	(225397575)	+	MIRc	SINE/MIR	65	135	(133)	42737
222	15.5	0.0	0.0	chr1	24085054	24085425	(224870997)	+	(ATGG)n	Simple_repeat	1	372	(0)	44098
2281	12.2	0.0	0.0	chr1	24192235	24192545	(224763877)	+	AluSq	SINE/Alu	1	311	(2)	44339
20	0.0	0.0	0.0	chr1	24192584	24192605	(224763817)	+	(TG)n	Simple_repeat	1	22	(0)	44340
34	7.2	0.0	0.0	chr1	24192605	24192649	(224763773)	+	(GA)n	Simple_repeat	1	45	(0)	44341
2027	10.5	5.2	1.7	chr1	24194592	24194885	(224761537)	C	AluSx	SINE/Alu	(7)	305	1	44348
33	3.1	0.0	0.0	chr1	24194913	24194945	(224761477)	+	(GT)n	Simple_repeat	1	33	(0)	44349
24	12.2	0.0	0.0	chr1	24194946	24194981	(224761441)	+	(AG)n	Simple_repeat	1	36	(0)	44350
1957	15.1	3.7	4.2	chr1	24195070	24195450	(224760972)	C	Tigger2a	DNA/TcMar-Tigger	(51)	383	5	44351
1765	12.3	2.9	4.6	chr1	24427974	24428258	(224528164)	+	AluJb	SINE/Alu	11	290	(22)	44872
53	0.0	0.0	0.0	chr1	24428259	24428303	(224528119)	+	(AG)n	Simple_repeat	1	45	(0)	44873
3578	13.0	4.3	4.6	chr1	24428304	24428781	(224527641)	+	MER39B	LTR/ERV1	178	652	(1)	44871
23	6.5	3.0	0.0	chr1	24552305	24552337	(224404085)	+	(CT)n	Simple_repeat	1	34	(0)	45150
21	4.0	0.0	0.0	chr1	24736309	24736334	(224220088)	+	(AG)n	Simple_repeat	1	26	(0)	45612
18	30.9	1.9	0.0	chr1	24736334	24736385	(224220037)	+	(GT)n	Simple_repeat	1	53	(0)	45613
227	40.0	0.0	0.0	chr1	24736432	24736506	(224219916)	+	MIR3	SINE/MIR	16	90	(118)	45614
3735	15.8	11.5	1.2	chr1	25232782	25233512	(223722910)	+	LTR8B	LTR/ERV1	2	817	(3)	46664
954	19.5	13.7	3.1	chr1	25240620	25240880	(223715542)	+	AluJr	SINE/Alu	1	293	(19)	46683
53	0.0	2.0	0.0	chr1	25357529	25357577	(223598845)	+	(GT)n	Simple_repeat	1	50	(0)	46958
47	0.0	0.0	0.0	chr1	25357610	25357649	(223598773)	+	(GT)n	Simple_repeat	1	40	(0)	46958
2231	8.8	0.3	0.3	chr1	25357652	25357936	(223598486)	C	AluSx3	SINE/Alu	(26)	285	1	46959
50	0.0	0.0	0.0	chr1	25819388	25819430	(223136992)	+	(GT)n	Simple_repeat	1	43	(0)	47891
230	28.7	8.5	1.8	chr1	25821143	25821252	(223135170)	C	L2	LINE/L2	(531)	2888	2771	47893
184	23.6	15.4	0.0	chr1	25859934	25859988	(223096434)	+	MIRc	SINE/MIR	34	98	(170)	47962
192	25.4	9.2	1.7	chr1	25859997	25860056	(223096366)	+	MIRc	SINE/MIR	189	253	(15)	47962
1110	16.6	0.0	0.0	chr1	26082459	26082621	(222873801)	+	FRAM	SINE/Alu	2	164	(12)	48516
677	25.1	2.4	9.8	chr1	26082622	26082677	(222873745)	+	MIRb	SINE/MIR	204	254	(14)	48515
1561	13.8	4.2	1.6	chr1	26082678	26082703	(222873719)	C	AluJr	SINE/Alu	(12)	300	275	48517
53	2.0	0.0	0.0	chr1	26082704	26082753	(222873669)	+	(CT)n	Simple_repeat	1	50	(0)	48518
1561	13.8	4.2	1.6	chr1	26082754	26082980	(222873442)	C	AluJr	SINE/Alu	(48)	264	40	48517
15	19.1	0.0	6.4	chr1	26111803	26111849	(222844573)	+	(CGG)n	Simple_repeat	1	47	(0)	48599
220	24.5	2.0	0.0	chr1	26124778	26124826	(222831596)	C	L2a	LINE/L2	(1)	3425	3376	48620
190	36.1	1.4	0.0	chr1	26124937	26124958	(222831464)	+	MIRb	SINE/MIR	189	260	(7)	48621
235	20.7	0.6	0.0	chr1	26124959	26125007	(222831415)	+	L2a	LINE/L2	3325	3414	(12)	48622
1718	18.2	0.7	1.0	chr1	26128456	26128746	(222827676)	+	AluJb	SINE/Alu	1	290	(22)	48630
37	23.2	0.0	0.0	chr1	26128747	26128827	(222827595)	+	(CA)n	Simple_repeat	1	81	(0)	48631
675	23.5	12.2	3.5	chr1	26128828	26129087	(222827335)	+	L1MEc	LINE/L1	417	702	(5698)	48628
2170	5.2	0.0	0.0	chr1	26233203	26233453	(222722969)	C	AluSc5	SINE/Alu	(58)	251	1	48877
216	24.4	5.8	5.8	chr1	26233470	26233556	(222722866)	+	MamTip2	DNA/hAT-Tip100	86	172	(133)	48878
2109	8.0	0.0	1.4	chr1	26359492	26359766	(222596656)	C	AluSc	SINE/Alu	(0)	309	39	49148
25	0.0	0.0	0.0	chr1	26359822	26359849	(222596573)	+	(CT)n	Simple_repeat	1	28	(0)	49149
43	0.0	0.0	0.0	chr1	26359850	26359886	(222596536)	+	(CA)n	Simple_repeat	1	37	(0)	49150
673	22.0	0.7	1.4	chr1	26517700	26517842	(222438580)	C	MLT1B	LTR/ERVL-MaLR	(43)	347	206	49563
970	20.5	5.4	0.0	chr1	26517916	26518125	(222438297)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	144	49564
70	0.0	0.0	0.0	chr1	26868249	26868308	(222088114)	+	(TC)n	Simple_repeat	1	60	(0)	50334
1955	13.2	2.9	6.0	chr1	26868321	26868639	(222087783)	C	AluJb	SINE/Alu	(1)	311	3	50335
29	0.0	0.0	0.0	chr1	26870307	26870331	(222086091)	+	(TC)n	Simple_repeat	1	25	(0)	50341
452	28.5	10.1	4.3	chr1	26870446	26870632	(222085790)	C	MIRb	SINE/MIR	(39)	229	31	50342
21	18.1	0.0	0.0	chr1	27235357	27235394	(221721028)	+	(TC)n	Simple_repeat	1	38	(0)	51289
50	0.0	0.0	0.0	chr1	27235395	27235437	(221720985)	+	(TG)n	Simple_repeat	1	43	(0)	51290
21	4.0	0.0	0.0	chr1	27496836	27496861	(221459561)	+	(TC)n	Simple_repeat	1	26	(0)	51876
211	24.0	0.0	0.0	chr1	27496959	27497013	(221459409)	+	L2a	LINE/L2	3036	3090	(285)	51877
16	8.3	0.0	0.0	chr1	27529236	27529261	(221427161)	+	(CCTC)n	Simple_repeat	1	26	(0)	51968
27	24.1	5.0	1.0	chr1	27603753	27603859	(221352563)	+	(CTCT)n	Simple_repeat	1	111	(0)	52102
21	15.3	1.8	5.2	chr1	27603927	27603983	(221352439)	+	(TCCC)n	Simple_repeat	1	58	(0)	52103
19	22.0	6.9	4.8	chr1	27604061	27604176	(221352246)	+	(CCTCGC)n	Simple_repeat	1	124	(0)	52104
1645	9.9	3.5	0.0	chr1	27630353	27630473	(221325949)	+	MER30	DNA/hAT-Charlie	101	229	(1)	52163
12	21.3	2.5	2.4	chr1	27630560	27630582	(221325840)	+	GA-rich	Low_complexity	1	41	(0)	52165
15	0.0	0.0	0.0	chr1	27630583	27630599	(221325823)	+	(GA)n	Simple_repeat	1	17	(0)	52166
253	22.6	14.2	1.7	chr1	27630743	27630859	(221325563)	+	MamRep605	LTR?	601	734	(115)	52167
19	22.1	1.8	1.8	chr1	27636687	27636718	(221319704)	+	GA-rich	Low_complexity	1	32	(0)	52177
29	0.0	0.0	0.0	chr1	27636719	27636743	(221319679)	+	(GT)n	Simple_repeat	1	25	(0)	52178
19	22.1	1.8	1.8	chr1	27636744	27636765	(221319657)	+	GA-rich	Low_complexity	33	54	(0)	52179
294	32.9	4.4	8.8	chr1	27666856	27667095	(221289327)	+	LTR103_Mam	LTR/ERV1?	74	302	(173)	52261
1551	17.4	1.8	4.3	chr1	27667128	27667409	(221289013)	+	AluJo	SINE/Alu	7	281	(31)	52262
14	22.2	5.8	0.0	chr1	27672284	27672335	(221284087)	+	(TCTGCAC)n	Simple_repeat	1	55	(0)	52273
371	32.7	5.3	1.8	chr1	27858305	27858469	(221097953)	C	MIRb	SINE/MIR	(48)	220	50	52686
3743	13.4	5.2	8.3	chr1	28132684	28133082	(220823340)	+	LTR8A	LTR/ERV1	1	386	(341)	53334
2015	16.4	1.0	0.6	chr1	28133083	28133393	(220823029)	C	AluJo	SINE/Alu	(0)	312	1	53335
849	18.2	0.0	0.0	chr1	28191453	28191584	(220764838)	+	FLAM_C	SINE/Alu	2	133	(10)	53503
35	0.0	0.0	0.0	chr1	28191587	28191616	(220764806)	+	(AG)n	Simple_repeat	1	30	(0)	53504
344	20.3	0.0	0.0	chr1	28233144	28233202	(220723220)	C	L1MB5	LINE/L1	(0)	6174	6116	53606
2570	4.2	0.3	0.7	chr1	28329281	28329587	(220626835)	C	AluSp	SINE/Alu	(7)	306	1	53911
1314	14.9	12.9	0.0	chr1	28510357	28510605	(220445817)	+	AluSc	SINE/Alu	2	287	(22)	54383
227	30.6	16.7	3.4	chr1	28516537	28516713	(220439709)	+	MIR	SINE/MIR	76	268	(0)	54406
17	7.8	0.0	6.5	chr1	28516753	28516783	(220439639)	+	(AG)n	Simple_repeat	1	31	(0)	54407
1567	9.5	0.0	0.0	chr1	28516924	28517134	(220439288)	+	AluSq2	SINE/Alu	86	296	(17)	54408
269	33.2	7.4	3.6	chr1	28599020	28599340	(220357082)	+	L2c	LINE/L2	2760	3141	(246)	54634
414	23.3	13.4	0.0	chr1	28599367	28599482	(220356940)	+	MIRb	SINE/MIR	25	158	(110)	54635
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
726	20.8	4.2	12.6	chr1	28846258	28846452	(220109970)	C	MLT1A	LTR/ERVL-MaLR	(13)	415	184	55302
2088	8.5	0.0	0.0	chr1	28846453	28846711	(220109711)	+	AluSx1	SINE/Alu	53	311	(1)	55303
473	24.5	6.8	4.4	chr1	28902755	28902912	(220053510)	+	MIRc	SINE/MIR	20	181	(87)	55455
869	25.4	3.4	2.2	chr1	28902914	28903142	(220053280)	+	MIRb	SINE/MIR	2	233	(35)	55456
333	29.6	15.4	1.5	chr1	29183178	29183451	(219772971)	C	L1MC5	LINE/L1	(2013)	7291	6973	56094
838	20.8	13.1	0.9	chr1	29183482	29183837	(219772585)	C	L1ME4b	LINE/L1	(619)	273	1	56093
423	30.0	6.7	4.0	chr1	29350055	29350332	(219606090)	C	MLT1L	LTR/ERVL-MaLR	(259)	351	73	56435
1822	24.1	12.6	1.7	chr1	29793094	29793740	(219162682)	+	LTR41B	LTR/ERVL	17	744	(14)	57302
555	32.0	4.3	7.4	chr1	30085239	30085713	(218870709)	C	L2b	LINE/L2	(0)	3375	2916	57815
2324	13.0	2.8	0.3	chr1	30401568	30401922	(218554500)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	58358
54	5.2	0.0	0.0	chr1	30401938	30401997	(218554425)	+	(TC)n	Simple_repeat	1	60	(0)	58359
20	9.8	0.0	0.0	chr1	30401999	30402031	(218554391)	+	(CCCT)n	Simple_repeat	1	33	(0)	58360
34	24.9	3.8	0.9	chr1	30727879	30727984	(218228438)	+	(TCTC)n	Simple_repeat	1	110	(0)	58929
970	24.3	2.3	2.3	chr1	30756373	30756636	(218199786)	C	MIR	SINE/MIR	(4)	258	2	58992
242	28.4	1.1	4.3	chr1	30756720	30756811	(218199611)	+	L3b	LINE/CR1	4990	5078	(154)	58991
182	30.6	0.0	0.0	chr1	30756942	30756990	(218199432)	C	MIR3	SINE/MIR	(104)	104	56	58993
667	27.5	4.6	11.8	chr1	30778486	30778840	(218177582)	+	MLT1K	LTR/ERVL-MaLR	101	428	(167)	59042
428	26.7	5.0	0.2	chr1	30778961	30779093	(218177329)	C	MIR	SINE/MIR	(42)	166	28	59043
1682	17.5	0.0	7.0	chr1	31119834	31119997	(217836425)	+	AluJb	SINE/Alu	140	297	(15)	59863
56	0.0	0.0	0.0	chr1	31120078	31120125	(217836297)	+	(CA)n	Simple_repeat	1	48	(0)	59866
231	20.9	3.4	16.5	chr1	31120173	31120275	(217836147)	C	MamGypLTR3a	LTR/Gypsy	(882)	99	11	59867
1907	12.5	7.4	2.8	chr1	31302586	31302946	(217653476)	C	THE1D	LTR/ERVL-MaLR	(0)	381	3	60370
31	0.0	0.0	0.0	chr1	31334304	31334337	(217622085)	+	(TC)n	Simple_repeat	1	34	(0)	60447
61	0.0	0.0	0.0	chr1	31334338	31334389	(217622033)	+	(TG)n	Simple_repeat	1	52	(0)	60448
3002	20.6	7.7	5.1	chr1	31469343	31469737	(217486685)	C	HERVIP10F-int	LTR/ERV1	(4807)	2796	2393	60732
26	35.9	0.0	0.9	chr1	31469806	31469913	(217486509)	+	(TCCCTT)n	Simple_repeat	1	108	(0)	60735
2570	23.0	0.3	2.0	chr1	31469971	31470600	(217485822)	C	HERVIP10F-int	LTR/ERV1	(5561)	2042	1403	60732
26	18.6	1.8	1.7	chr1	31580030	31580086	(217376336)	+	(TG)n	Simple_repeat	1	58	(0)	60942
100	4.0	0.0	0.0	chr1	31580163	31580265	(217376157)	+	(CT)n	Simple_repeat	1	103	(0)	60943
243	20.9	7.4	0.0	chr1	31788876	31788957	(217167465)	C	MIRc	SINE/MIR	(54)	176	83	61315
253	26.7	17.8	0.8	chr1	31842669	31842789	(217113633)	C	LTR88b	LTR/Gypsy?	(652)	185	40	61442
265	22.6	1.6	4.6	chr1	31842878	31842942	(217113480)	+	LTR88c	LTR/Gypsy?	668	730	(132)	61443
46	0.0	0.0	0.0	chr1	31842946	31842984	(217113438)	+	(CT)n	Simple_repeat	1	39	(0)	61444
218	26.1	8.4	0.0	chr1	31843002	31843066	(217113356)	C	L2a	LINE/L2	(0)	3375	3305	61445
596	25.0	5.8	0.0	chr1	31843071	31843234	(217113188)	+	MER91A	DNA/hAT-Tip100	23	196	(0)	61446
354	18.2	3.6	5.4	chr1	31843235	31843326	(217113096)	C	L2a	LINE/L2	(63)	3324	3222	61445
181	28.7	6.0	5.0	chr1	31880287	31880385	(217076037)	C	MIR1_Amn	SINE/MIR	(127)	103	4	61542
30	17.0	3.3	0.0	chr1	31880484	31880543	(217075879)	+	GA-rich	Low_complexity	1	62	(0)	61543
366	24.5	18.1	5.5	chr1	31943718	31943925	(217012497)	+	MIRb	SINE/MIR	14	256	(6)	61668
296	31.8	13.0	1.9	chr1	31943970	31944126	(217012296)	+	MIRb	SINE/MIR	1	177	(91)	61669
1623	13.5	6.0	5.1	chr1	31945033	31945127	(217011295)	C	MER2	DNA/TcMar-Tigger	(5)	340	256	61670
2262	9.2	0.4	0.0	chr1	31955659	31955939	(217000483)	+	AluSp	SINE/Alu	2	283	(30)	61707
35	0.0	0.0	0.0	chr1	31955940	31955972	(217000450)	+	(ATAA)n	Simple_repeat	1	33	(0)	61708
45	4.8	1.4	4.1	chr1	31958216	31958287	(216998135)	+	(TTTC)n	Simple_repeat	1	73	(0)	61714
29	10.9	1.9	1.9	chr1	31958289	31958341	(216998081)	+	(CCTT)n	Simple_repeat	1	54	(0)	61715
2006	13.9	0.0	0.0	chr1	31958342	31958615	(216997807)	C	AluJb	SINE/Alu	(38)	274	1	61716
1332	10.6	0.0	1.1	chr1	31961484	31961663	(216994759)	C	AluSx	SINE/Alu	(28)	284	107	61726
262	20.2	11.6	2.3	chr1	32200155	32200240	(216756182)	+	MIR	SINE/MIR	132	226	(36)	62300
18	16.8	2.5	0.0	chr1	32200281	32200320	(216756102)	+	(CTG)n	Simple_repeat	1	41	(0)	62301
22	11.8	2.7	0.0	chr1	32200326	32200362	(216756060)	+	(TC)n	Simple_repeat	1	38	(0)	62302
255	31.2	4.1	0.0	chr1	32235852	32235944	(216720478)	+	L2c	LINE/L2	1951	2047	(1372)	62363
187	27.4	4.6	1.6	chr1	32235945	32236007	(216720415)	+	L2c	LINE/L2	2837	2901	(518)	62363
1712	18.2	0.7	0.7	chr1	32236065	32236351	(216720071)	+	Tigger7	DNA/TcMar-Tigger	12	298	(2193)	62364
53	3.8	0.0	0.0	chr1	32251890	32251943	(216704479)	+	(GA)n	Simple_repeat	1	54	(0)	62406
1608	16.9	5.7	0.0	chr1	32272307	32272573	(216683849)	+	AluJo	SINE/Alu	1	283	(29)	62486
78	5.0	0.0	0.0	chr1	32272574	32272657	(216683765)	+	(AG)n	Simple_repeat	1	84	(0)	62487
391	31.4	0.7	7.3	chr1	32272658	32272749	(216683673)	C	L2c	LINE/L2	(313)	3074	2989	62485
225	28.2	1.0	1.0	chr1	32272759	32273434	(216682988)	+	(TG)n	Simple_repeat	1	683	(0)	62488
475	37.4	10.3	3.0	chr1	32390925	32391079	(216565343)	C	L2c	LINE/L2	(1046)	2373	2194	62764
243	28.8	2.6	2.6	chr1	32391107	32391220	(216565202)	C	L2-1_AMi	LINE/L2	(991)	244	131	62768
6250	13.3	3.1	2.2	chr1	32448198	32449195	(216507227)	+	LTR13	LTR/ERVK	1	1007	(0)	62858
555	31.2	17.1	3.2	chr1	32536598	32537393	(216419029)	+	L2a	LINE/L2	2481	3399	(27)	63096
17	26.6	2.6	3.8	chr1	32754386	32754462	(216201960)	+	(ACAC)n	Simple_repeat	1	79	(0)	63658
16	35.1	0.0	1.5	chr1	32754532	32754597	(216201825)	+	(AC)n	Simple_repeat	1	66	(0)	63659
9211	20.1	5.6	6.1	chr1	32923851	32926332	(216030090)	C	HERVS71-int	LTR/ERV1	(6507)	2471	4	64043
525	26.8	11.8	3.0	chr1	33182274	33182542	(215773880)	+	Charlie16a	DNA/hAT-Charlie	47	342	(0)	64627
41	0.0	0.0	0.0	chr1	33182601	33182635	(215773787)	+	(TG)n	Simple_repeat	1	35	(0)	64628
228	28.7	8.0	2.0	chr1	33182698	33182850	(215773572)	C	L2b	LINE/L2	(291)	3096	2934	64623
37	0.0	0.0	0.0	chr1	33455914	33455945	(215500477)	+	(AG)n	Simple_repeat	1	32	(0)	65138
26	15.5	1.6	3.2	chr1	33458770	33458830	(215497592)	+	(ACAC)n	Simple_repeat	1	62	(0)	65145
2053	28.4	5.5	5.9	chr1	33458866	33459129	(215497293)	C	L2	LINE/L2	(339)	3080	2815	65146
2046	12.0	0.0	3.1	chr1	33459130	33459462	(215496960)	C	AluSz6	SINE/Alu	(0)	312	1	65147
1005	24.4	4.3	9.1	chr1	33783238	33783431	(215172991)	+	MLT1B	LTR/ERVL-MaLR	1	185	(205)	65659
51	0.0	0.0	0.0	chr1	33783432	33783475	(215172947)	+	(TC)n	Simple_repeat	1	44	(0)	65660
1005	24.4	4.3	9.1	chr1	33783476	33783619	(215172803)	+	MLT1B	LTR/ERVL-MaLR	186	322	(68)	65659
46	0.0	0.0	0.0	chr1	34169597	34169635	(214786787)	+	(GA)n	Simple_repeat	1	39	(0)	66337
1808	17.7	2.6	3.6	chr1	34845893	34846278	(214110144)	+	MLT1B	LTR/ERVL-MaLR	9	390	(0)	67529
39	32.2	0.0	0.0	chr1	35192740	35192869	(213763553)	+	(GCG)n	Simple_repeat	1	130	(0)	68203
17	27.0	2.9	1.4	chr1	35192969	35193037	(213763385)	+	(CCGCCA)n	Simple_repeat	1	70	(0)	68204
3196	21.1	4.7	8.3	chr1	35278720	35280084	(213676338)	C	MLT1C-int	LTR/ERVL-MaLR	(103)	1386	44	68443
73	26.1	1.8	2.7	chr1	35280086	35280306	(213676116)	+	(TTTC)n	Simple_repeat	1	225	(0)	68445
810	18.4	0.0	0.0	chr1	35280313	35280437	(213675985)	C	AluJb	SINE/Alu	(187)	125	1	68446
2358	18.5	5.1	5.8	chr1	35765490	35765994	(213190428)	+	L1MC5	LINE/L1	8313	8811	(493)	69404
2325	10.0	0.3	0.3	chr1	35765995	35766294	(213190128)	C	AluSx	SINE/Alu	(12)	300	1	69405
188	33.3	4.9	0.0	chr1	35930475	35930552	(213025870)	C	L2	LINE/L2	(528)	2891	2810	69780
19	11.5	2.5	2.4	chr1	36157018	36157057	(212799365)	+	GA-rich	Low_complexity	1	41	(0)	70249
13	34.7	0.0	0.0	chr1	36157095	36157152	(212799270)	+	G-rich	Low_complexity	1	58	(0)	70250
51	2.1	0.0	0.0	chr1	36161864	36161911	(212794511)	+	(TG)n	Simple_repeat	1	48	(0)	70258
22	13.9	6.1	0.0	chr1	36968190	36968220	(211988202)	+	(CT)n	Simple_repeat	1	33	(0)	71866
54	0.0	0.0	0.0	chr1	36968221	36968266	(211988156)	+	(GT)n	Simple_repeat	1	46	(0)	71867
22	13.9	6.1	0.0	chr1	36968267	36968283	(211988139)	+	(CT)n	Simple_repeat	2	19	(0)	71868
38	2.8	0.0	0.0	chr1	37021092	37021128	(211935294)	+	(GT)n	Simple_repeat	1	37	(0)	71964
23	0.0	0.0	0.0	chr1	37021129	37021153	(211935269)	+	(AG)n	Simple_repeat	1	25	(0)	71965
55	0.0	0.0	0.0	chr1	37190720	37190766	(211765656)	+	(CT)n	Simple_repeat	1	47	(0)	72269
323	35.8	5.2	3.7	chr1	37363838	37364109	(211592313)	C	L2b	LINE/L2	(248)	3127	2854	72586
54	2.0	0.0	0.0	chr1	37364167	37364217	(211592205)	+	(AC)n	Simple_repeat	1	51	(0)	72587
26	3.1	0.0	0.0	chr1	37364218	37364248	(211592174)	+	(AG)n	Simple_repeat	1	31	(0)	72588
890	19.9	8.7	7.3	chr1	37441909	37442238	(211514184)	+	LTR37B	LTR/ERV1	134	468	(0)	72739
292	23.4	0.9	0.1	chr1	37442350	37443025	(211513397)	+	(CTCT)n	Simple_repeat	1	682	(0)	72740
1638	23.0	8.4	2.5	chr1	37472794	37473367	(211483055)	+	L1ME3D	LINE/L1	5630	6239	(3)	72807
16	5.2	0.0	0.0	chr1	37473492	37473511	(211482911)	+	(TC)n	Simple_repeat	1	20	(0)	72808
26	8.9	0.0	0.0	chr1	37473507	37473542	(211482880)	+	(CA)n	Simple_repeat	1	36	(0)	72809
1942	14.3	7.7	2.4	chr1	38011667	38012045	(210944377)	C	MER34C2	LTR/ERV1	(154)	401	1	73915
2126	6.2	3.9	1.5	chr1	38012049	38012347	(210944075)	C	AluSg	SINE/Alu	(0)	310	1	73916
42	4.7	0.0	0.0	chr1	38040457	38040501	(210915921)	+	(GT)n	Simple_repeat	1	45	(0)	73962
27	0.0	0.0	0.0	chr1	38040502	38040531	(210915891)	+	(AG)n	Simple_repeat	1	30	(0)	73963
36	18.4	0.0	0.0	chr1	38068765	38068828	(210887594)	+	(GT)n	Simple_repeat	1	64	(0)	74020
24	5.9	0.0	5.1	chr1	38068833	38068871	(210887551)	+	(GA)n	Simple_repeat	1	39	(0)	74021
28	8.1	7.4	1.7	chr1	39025885	39025938	(209930484)	+	(CT)n	Simple_repeat	1	58	(0)	75885
1846	14.9	0.4	2.1	chr1	39025943	39026230	(209930192)	C	AluJb	SINE/Alu	(29)	283	1	75886
53	0.0	0.0	0.0	chr1	39186171	39186215	(209770207)	+	(TC)n	Simple_repeat	1	45	(0)	76255
29	0.0	0.0	0.0	chr1	39186216	39186247	(209770175)	+	(GT)n	Simple_repeat	1	32	(0)	76256
1275	6.8	1.2	1.2	chr1	39186269	39186430	(209769992)	C	AluSc5	SINE/Alu	(13)	296	135	76257
532	28.3	8.9	1.6	chr1	39193571	39193757	(209762665)	C	MIRb	SINE/MIR	(23)	245	44	76277
30	3.5	0.0	0.0	chr1	39193781	39193810	(209762612)	+	(AG)n	Simple_repeat	1	30	(0)	76278
2159	10.4	4.2	0.0	chr1	39193836	39194132	(209762290)	C	AluSq	SINE/Alu	(3)	310	1	76279
33	2.6	5.0	0.0	chr1	39696546	39696585	(209259837)	+	(TC)n	Simple_repeat	1	42	(0)	77223
328	27.9	4.5	3.9	chr1	39994730	39994868	(208961554)	C	MLT1O	LTR/ERVL-MaLR	(217)	325	185	77878
42	0.0	0.0	0.0	chr1	39994869	39994904	(208961518)	+	(TG)n	Simple_repeat	1	36	(0)	77879
328	27.9	4.5	3.9	chr1	39994905	39994917	(208961505)	C	MLT1O	LTR/ERVL-MaLR	(358)	184	172	77878
1132	32.1	8.0	5.6	chr1	40029623	40029939	(208926483)	+	L2b	LINE/L2	2335	2646	(773)	77967
2442	9.0	0.3	0.0	chr1	40029940	40030249	(208926173)	C	AluSp	SINE/Alu	(1)	312	2	77971
681	32.5	1.5	0.5	chr1	40059793	40059984	(208896438)	C	MIR3	SINE/MIR	(12)	196	3	78038
801	25.2	7.2	1.1	chr1	40383012	40383454	(208572968)	C	LTR33A	LTR/ERVL	(0)	520	12	78711
411	29.9	10.7	7.3	chr1	40400032	40400708	(208555714)	C	L2b	LINE/L2	(211)	3164	2444	78731
708	33.9	13.6	3.9	chr1	40809258	40809782	(208146640)	+	L2	LINE/L2	2261	2847	(572)	79548
2429	5.8	1.7	0.0	chr1	40809783	40810073	(208146349)	+	AluSx1	SINE/Alu	1	296	(16)	79550
306	28.9	7.4	2.2	chr1	40863588	40863762	(208092660)	C	MIRc	SINE/MIR	(2)	228	41	79663
637	17.0	0.0	0.0	chr1	40864036	40864129	(208092293)	C	AluJr	SINE/Alu	(218)	94	1	79664
47	0.0	2.3	0.0	chr1	41394160	41394203	(207562219)	+	(AG)n	Simple_repeat	1	45	(0)	80727
33	9.2	3.5	0.0	chr1	41854108	41854165	(207102257)	+	(TC)n	Simple_repeat	1	60	(0)	81575
2069	18.9	3.7	4.5	chr1	41897631	41897806	(207058616)	C	MER31A	LTR/ERV1	(308)	177	1	81641
57	1.9	0.0	0.0	chr1	41897929	41897981	(207058441)	+	(GA)n	Simple_repeat	1	53	(0)	81643
43	0.0	0.0	0.0	chr1	42819171	42819207	(206137215)	+	(GT)n	Simple_repeat	1	37	(0)	83219
235	29.9	0.0	1.3	chr1	42959104	42959181	(205997241)	+	MIR3	SINE/MIR	77	153	(55)	83431
440	25.0	1.9	0.0	chr1	42959265	42959368	(205997054)	+	MIR	SINE/MIR	132	237	(25)	83431
370	27.7	7.7	4.8	chr1	42967416	42967599	(205988823)	+	MIR3	SINE/MIR	3	187	(21)	83454
696	13.8	0.0	4.9	chr1	44091823	44091945	(204864477)	+	AluJo	SINE/Alu	195	311	(1)	85419
35	0.0	0.0	0.0	chr1	44091962	44091991	(204864431)	+	(CT)n	Simple_repeat	1	30	(0)	85420
16	0.0	0.0	0.0	chr1	44092033	44092049	(204864373)	+	(A)n	Simple_repeat	1	17	(0)	85421
2222	9.2	0.3	1.4	chr1	44092061	44092354	(204864068)	+	AluSp	SINE/Alu	1	291	(22)	85422
2160	10.4	4.8	0.0	chr1	44100117	44100287	(204856135)	+	AluSz	SINE/Alu	132	312	(0)	85443
980	21.9	4.4	18.0	chr1	44100288	44100589	(204855833)	+	L1MC4a	LINE/L1	6007	6309	(1573)	85439
346	22.0	14.8	4.5	chr1	44213112	44213244	(204743178)	C	MIRb	SINE/MIR	(34)	234	86	85684
56	0.0	0.0	0.0	chr1	44502053	44502100	(204454322)	+	(AC)n	Simple_repeat	1	48	(0)	86148
21	0.0	0.0	0.0	chr1	44502135	44502157	(204454265)	+	(TC)n	Simple_repeat	1	23	(0)	86149
36	8.2	1.9	0.0	chr1	44502158	44502209	(204454213)	+	(CA)n	Simple_repeat	1	53	(0)	86150
246	35.1	0.0	13.2	chr1	44597133	44597345	(204359077)	C	MIR	SINE/MIR	(46)	216	32	86342
50	0.0	0.0	0.0	chr1	44597469	44597511	(204358911)	+	(CA)n	Simple_repeat	1	43	(0)	86343
14	14.7	0.0	8.9	chr1	44597515	44597559	(204358863)	+	(CCTC)n	Simple_repeat	1	45	(0)	86344
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
837	16.1	0.0	0.8	chr1	44722273	44722402	(204234020)	+	FLAM_C	SINE/Alu	3	131	(12)	86567
1001	16.8	11.2	0.0	chr1	44730709	44730899	(204225523)	+	AluSx4	SINE/Alu	7	221	(89)	86588
632	17.4	0.0	0.9	chr1	44731055	44731170	(204225252)	C	U5	snRNA	(1)	115	1	86589
30	0.0	0.0	0.0	chr1	44791205	44791230	(204165192)	+	(AG)n	Simple_repeat	1	26	(0)	86716
31	3.3	0.0	0.0	chr1	44791233	44791263	(204165159)	+	(TG)n	Simple_repeat	1	31	(0)	86717
581	20.9	3.5	0.0	chr1	44819555	44819664	(204136758)	C	AluSx3	SINE/Alu	(17)	294	181	86770
757	24.1	2.4	0.6	chr1	44819664	44819825	(204136597)	C	AluSx	SINE/Alu	(35)	277	113	86771
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
2284	12.5	1.2	2.9	chr1	45411263	45411607	(203544815)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	87942
3740	13.7	15.2	0.7	chr1	45411608	45411867	(203544555)	+	LTR8B	LTR/ERV1	525	808	(12)	87941
449	15.6	1.3	1.3	chr1	45411878	45411955	(203544467)	C	AluJb	SINE/Alu	(234)	78	1	87940
220	17.4	4.2	0.0	chr1	45687561	45687606	(203268816)	C	MIR3	SINE/MIR	(80)	128	81	88537
1244	25.0	16.4	2.0	chr1	46148231	46148683	(202807739)	C	MLT1K	LTR/ERVL-MaLR	(1)	594	64	89433
40	0.0	0.0	0.0	chr1	46148744	46148777	(202807645)	+	(GA)n	Simple_repeat	1	34	(0)	89434
3233	14.5	4.3	8.2	chr1	46148862	46149139	(202807283)	+	MER41B	LTR/ERV1	7	283	(351)	89435
16	37.8	1.7	2.5	chr1	46453232	46453350	(202503072)	+	G-rich	Low_complexity	1	121	(0)	90078
2066	21.7	5.8	7.1	chr1	46481959	46482533	(202473889)	+	MLT1F1	LTR/ERVL-MaLR	1	567	(2)	90127
2270	12.2	0.0	1.3	chr1	46484514	46484824	(202471598)	+	AluSx1	SINE/Alu	1	307	(5)	90129
39	0.0	2.7	0.0	chr1	47179099	47179135	(201777287)	+	(TC)n	Simple_repeat	1	38	(0)	91048
16	25.8	0.0	0.0	chr1	47229392	47229429	(201726993)	+	GA-rich	Low_complexity	1	38	(0)	91123
16	15.3	6.4	4.0	chr1	47239354	47239400	(201717022)	+	(TC)n	Simple_repeat	1	50	(0)	91142
196	21.7	9.1	3.2	chr1	47614916	47614977	(201341445)	+	MIRb	SINE/MIR	202	267	(1)	91963
24	6.9	0.0	0.0	chr1	47615101	47615131	(201341291)	+	(GT)n	Simple_repeat	1	31	(0)	91964
21	8.8	2.5	4.9	chr1	47615131	47615170	(201341252)	+	GA-rich	Low_complexity	1	41	(0)	91965
3341	16.5	2.1	2.6	chr1	50884562	50885240	(198071182)	C	L1M1	LINE/L1	(2297)	5268	4594	97588
242	15.4	1.9	5.5	chr1	50885240	50885294	(198071128)	C	L1M1	LINE/L1	(3595)	3970	3918	97588
16	0.0	0.0	0.0	chr1	50885296	50885313	(198071109)	+	(TC)n	Simple_repeat	1	18	(0)	97589
4659	12.5	3.4	0.7	chr1	50885326	50886389	(198070033)	C	L1M1	LINE/L1	(3631)	3934	2839	97588
181	35.1	3.8	1.3	chr1	51341878	51342030	(197614392)	C	L3	LINE/CR1	(5)	4094	3938	98485
249	28.6	14.9	4.2	chr1	51342139	51342328	(197614094)	+	MamTip2	DNA/hAT-Tip100	8	221	(84)	98486
2478	9.4	0.0	0.0	chr1	51429644	51429950	(197526472)	C	AluSx1	SINE/Alu	(5)	307	1	98643
2016	11.3	5.3	0.0	chr1	51605702	51605984	(197350438)	+	AluSg	SINE/Alu	2	300	(10)	99081
30	9.8	1.6	4.8	chr1	51605985	51606052	(197350370)	+	A-rich	Low_complexity	1	65	(0)	99082
224	31.0	1.1	4.4	chr1	51606120	51606210	(197350212)	C	L2c	LINE/L2	(688)	2731	2644	99079
259	26.7	9.4	5.6	chr1	51648707	51648849	(197307573)	+	MIR1_Amn	SINE/MIR	68	216	(14)	99177
1565	19.2	3.5	2.6	chr1	51693100	51693406	(197263016)	+	AluJo	SINE/Alu	3	312	(0)	99283
257	31.3	8.0	8.0	chr1	51963965	51964467	(196991955)	+	L2-3_Crp	LINE/L2	586	1088	(1008)	99837
1485	23.7	4.7	3.3	chr1	51964507	51964930	(196991492)	+	L2b	LINE/L2	2379	2808	(611)	99836
214	28.3	2.0	3.9	chr1	52112090	52112192	(196844230)	+	L2b	LINE/L2	3326	3426	(0)	100203
31	0.0	0.0	0.0	chr1	52112350	52112376	(196844046)	+	(TC)n	Simple_repeat	1	27	(0)	100205
789	12.9	2.3	3.0	chr1	52112394	52112525	(196843897)	C	FLAM_A	SINE/Alu	(11)	131	1	100206
30	6.1	0.0	0.0	chr1	52140781	52140815	(196815607)	+	(AC)n	Simple_repeat	1	35	(0)	100276
24	17.2	2.2	0.0	chr1	52140816	52140861	(196815561)	+	GA-rich	Low_complexity	1	47	(0)	100277
12	18.7	4.3	4.2	chr1	52366414	52366459	(196589963)	+	(CTCG)n	Simple_repeat	1	48	(0)	100700
18	19.4	9.5	2.5	chr1	52568190	52568263	(196388159)	+	(TC)n	Simple_repeat	1	81	(0)	101130
226	20.0	0.0	0.0	chr1	53220412	53220456	(195735966)	+	L1M1	LINE/L1	1015	1059	(6506)	102673
364	29.1	4.1	0.8	chr1	53350087	53350204	(195606218)	+	MIRc	SINE/MIR	45	166	(102)	102937
210	26.0	0.0	8.3	chr1	53350234	53350342	(195606080)	+	L2c	LINE/L2	2917	3016	(371)	102938
8300	5.0	0.7	0.9	chr1	53360543	53361551	(195594871)	C	LTR13	LTR/ERVK	(0)	1007	1	102964
23	20.1	0.0	3.3	chr1	53458002	53458062	(195498360)	+	G-rich	Low_complexity	1	61	(0)	103122
51	2.1	0.0	0.0	chr1	53458063	53458110	(195498312)	+	(GA)n	Simple_repeat	1	48	(0)	103123
2531	7.7	0.0	0.3	chr1	53458154	53458466	(195497956)	+	AluSx1	SINE/Alu	1	312	(0)	103124
35	0.0	0.0	0.0	chr1	53869132	53869161	(195087261)	+	(TC)n	Simple_repeat	1	30	(0)	103928
26	0.0	0.0	0.0	chr1	53869162	53869190	(195087232)	+	(AC)n	Simple_repeat	1	29	(0)	103929
15	0.0	0.0	0.0	chr1	53869331	53869347	(195087075)	+	(TG)n	Simple_repeat	1	17	(0)	103930
831	25.9	4.6	1.1	chr1	53869350	53869606	(195086816)	C	MIR	SINE/MIR	(0)	262	3	103931
366	32.8	10.6	3.8	chr1	54409151	54409467	(194546955)	+	L2c	LINE/L2	3034	3374	(13)	105004
669	22.2	1.9	0.7	chr1	54459215	54459368	(194497054)	+	LTR16A	LTR/ERVL	254	409	(29)	105117
477	27.0	10.6	2.8	chr1	54459432	54459648	(194496774)	+	L2a	LINE/L2	3191	3426	(0)	105116
551	32.9	9.2	4.2	chr1	54651188	54651695	(194304727)	C	L2b	LINE/L2	(13)	3362	2826	105572
21	0.0	0.0	0.0	chr1	54651788	54651810	(194304612)	+	(CT)n	Simple_repeat	1	23	(0)	105573
31	3.3	0.0	0.0	chr1	54651811	54651841	(194304581)	+	(TG)n	Simple_repeat	1	31	(0)	105574
81	3.6	6.0	0.0	chr1	54736151	54736266	(194220156)	+	(GA)n	Simple_repeat	1	123	(0)	105782
281	25.8	14.3	1.5	chr1	54736267	54736357	(194220065)	C	L1MC4	LINE/L1	(1430)	6612	6503	105780
2025	16.4	0.3	0.3	chr1	54736358	54736669	(194219753)	C	AluJb	SINE/Alu	(0)	312	1	105783
45	0.0	2.4	0.0	chr1	55245415	55245456	(193710966)	+	(GT)n	Simple_repeat	1	43	(0)	106705
25	3.4	0.0	0.0	chr1	55245457	55245486	(193710936)	+	(AG)n	Simple_repeat	1	30	(0)	106706
561	25.4	12.0	0.5	chr1	57227273	57227478	(191728944)	C	L2a	LINE/L2	(4)	3422	3190	110392
2088	15.3	0.3	1.0	chr1	57227508	57227519	(191728903)	C	AluJb	SINE/Alu	(7)	305	294	110393
50	0.0	0.0	0.0	chr1	57227520	57227562	(191728860)	+	(TG)n	Simple_repeat	1	43	(0)	110394
2088	15.3	0.3	1.0	chr1	57227563	57227856	(191728566)	C	AluJb	SINE/Alu	(19)	293	1	110393
1867	17.7	1.5	14.3	chr1	58433380	58433596	(190522826)	C	MSTD	LTR/ERVL-MaLR	(0)	396	217	112860
41	5.7	1.8	1.7	chr1	58433597	58433653	(190522769)	+	(GT)n	Simple_repeat	1	58	(0)	112861
1867	17.7	1.5	14.3	chr1	58433654	58433890	(190522532)	C	MSTD	LTR/ERVL-MaLR	(180)	216	1	112860
2314	9.9	0.7	0.0	chr1	58648243	58648524	(190307898)	+	AluSz	SINE/Alu	1	284	(28)	113247
65	0.0	0.0	0.0	chr1	58648525	58648579	(190307843)	+	(AC)n	Simple_repeat	1	55	(0)	113248
33	0.0	0.0	0.0	chr1	58648580	58648615	(190307807)	+	(GA)n	Simple_repeat	1	36	(0)	113249
376	30.5	17.6	3.1	chr1	58648616	58648872	(190307550)	+	HAL1	LINE/L1	350	651	(1856)	113246
390	31.7	4.3	0.5	chr1	58899474	58899676	(190056746)	C	MIRc	SINE/MIR	(32)	236	26	113772
43	2.5	0.0	0.0	chr1	59016636	59016676	(189939746)	+	(CT)n	Simple_repeat	1	41	(0)	114009
1255	13.1	0.0	0.0	chr1	59016707	59016882	(189939540)	+	AluSx	SINE/Alu	137	312	(0)	114010
23	5.7	2.6	2.5	chr1	59297041	59297079	(189659343)	+	(CCT)n	Simple_repeat	1	40	(0)	114621
19	0.0	4.2	0.0	chr1	60572035	60572058	(188384364)	+	(GT)n	Simple_repeat	1	25	(0)	116759
52	8.9	0.0	0.0	chr1	60572058	60572129	(188384293)	+	(GA)n	Simple_repeat	1	72	(0)	116760
30	14.7	0.0	0.0	chr1	60936465	60936518	(188019904)	+	(GAGA)n	Simple_repeat	1	54	(0)	117377
27	19.4	3.1	0.0	chr1	61077349	61077413	(187879009)	+	(AGCG)n	Simple_repeat	1	67	(0)	117645
37	4.1	5.9	0.0	chr1	61082673	61082723	(187873699)	+	(TC)n	Simple_repeat	1	54	(0)	117650
15	18.9	6.2	0.0	chr1	61082727	61082774	(187873648)	+	(CACGCA)n	Simple_repeat	1	51	(0)	117651
62	5.8	0.0	0.0	chr1	61393239	61393311	(187563111)	+	(CTCTCT)n	Simple_repeat	1	73	(0)	118077
991	32.5	1.5	4.2	chr1	61393344	61393767	(187562655)	C	MLT1K	LTR/ERVL-MaLR	(177)	418	7	118078
1932	18.5	0.7	0.0	chr1	61394827	61395128	(187561294)	+	AluSz	SINE/Alu	1	304	(8)	118083
78	6.6	3.6	0.0	chr1	61588982	61589093	(187367329)	+	(TC)n	Simple_repeat	1	116	(0)	118399
470	22.9	13.4	14.4	chr1	61812071	61812315	(187144107)	C	L1MEg	LINE/L1	(5328)	2005	1753	118906
60	12.9	2.0	0.0	chr1	61812334	61812434	(187143988)	+	(GA)n	Simple_repeat	1	103	(0)	118908
33	8.3	3.9	0.0	chr1	61812434	61812484	(187143938)	+	(GT)n	Simple_repeat	1	53	(0)	118909
2212	12.8	0.0	0.0	chr1	61812567	61812863	(187143559)	+	AluSx1	SINE/Alu	1	297	(15)	118910
426	25.8	10.8	9.6	chr1	62621963	62622243	(186334179)	+	MLT1H	LTR/ERVL-MaLR	42	354	(195)	120536
42	7.0	1.6	1.6	chr1	62735819	62735880	(186220542)	+	(TC)n	Simple_repeat	1	63	(0)	120737
1776	23.7	6.7	0.0	chr1	63681458	63681875	(185274547)	+	MLT2B1	LTR/ERVL	1	448	(72)	122476
30	0.0	0.0	0.0	chr1	63681876	63681901	(185274521)	+	(CT)n	Simple_repeat	1	26	(0)	122477
62	4.8	0.0	0.0	chr1	63681903	63681968	(185274454)	+	(GT)n	Simple_repeat	1	66	(0)	122478
681	24.0	12.9	1.0	chr1	63681969	63681999	(185274423)	+	MLT2B1	LTR/ERVL	522	552	(2)	122476
778	33.7	12.3	1.2	chr1	63682003	63682451	(185273971)	+	L2a	LINE/L2	2498	3013	(406)	122475
219	39.4	1.0	0.0	chr1	64902448	64902546	(184053876)	C	L2b	LINE/L2	(10)	3365	3266	124685
38	0.0	0.0	0.0	chr1	64902552	64902584	(184053838)	+	(GA)n	Simple_repeat	1	33	(0)	124686
26	0.0	0.0	0.0	chr1	64902585	64902611	(184053811)	+	(TG)n	Simple_repeat	2	28	(0)	124687
18	0.0	4.3	0.0	chr1	65231336	65231358	(183725064)	+	(TG)n	Simple_repeat	1	24	(0)	125377
31	0.0	0.0	0.0	chr1	65234513	65234539	(183721883)	+	(TC)n	Simple_repeat	1	27	(0)	125385
865	23.1	5.2	11.6	chr1	65293098	65293493	(183662929)	C	MLT1B	LTR/ERVL-MaLR	(6)	384	16	125518
29	7.4	2.3	0.0	chr1	66749996	66750021	(182206401)	+	(TC)n	Simple_repeat	1	26	(0)	127707
44	4.4	0.0	0.0	chr1	66750022	66750068	(182206354)	+	(TG)n	Simple_repeat	1	47	(0)	127708
29	7.4	2.3	0.0	chr1	66750069	66750085	(182206337)	+	(TC)n	Simple_repeat	1	18	(0)	127709
15	25.9	1.4	5.6	chr1	67053630	67053700	(181902722)	+	(GCCC)n	Simple_repeat	1	72	(0)	128151
1399	21.0	4.9	10.6	chr1	67637155	67637317	(181319105)	+	MLT1B	LTR/ERVL-MaLR	1	170	(220)	129309
979	12.4	0.0	0.0	chr1	67637323	67637443	(181318979)	C	AluJo	SINE/Alu	(187)	125	5	129310
1399	21.0	4.9	10.6	chr1	67637444	67637481	(181318941)	+	MLT1B	LTR/ERVL-MaLR	171	188	(202)	129309
35	0.0	0.0	0.0	chr1	67637482	67637511	(181318911)	+	(TC)n	Simple_repeat	1	30	(0)	129311
1399	21.0	4.9	10.6	chr1	67637512	67637723	(181318699)	+	MLT1B	LTR/ERVL-MaLR	189	390	(0)	129309
717	31.9	10.1	2.5	chr1	67653203	67653516	(181302906)	+	L2	LINE/L2	1395	1739	(1680)	129351
50	5.6	0.0	0.0	chr1	67653517	67653572	(181302850)	+	(TC)n	Simple_repeat	1	56	(0)	129352
717	31.9	10.1	2.5	chr1	67653573	67653688	(181302734)	+	L2	LINE/L2	1740	1860	(1559)	129351
3301	15.8	1.0	5.9	chr1	69551507	69552150	(179404272)	C	LTR9	LTR/ERV1	(0)	612	1	132170
2405	7.9	0.0	1.3	chr1	69566596	69566899	(179389523)	+	AluSq2	SINE/Alu	1	300	(13)	132179
17	4.5	0.0	4.0	chr1	69567003	69567018	(179389404)	+	(GA)n	Simple_repeat	1	16	(0)	132180
51	0.0	0.0	0.0	chr1	69567019	69567062	(179389360)	+	(GT)n	Simple_repeat	1	44	(0)	132181
427	27.5	14.1	5.4	chr1	70004431	70004655	(178951767)	C	MIR	SINE/MIR	(9)	253	13	132742
44	28.4	1.5	0.8	chr1	70004706	70004837	(178951585)	+	(TC)n	Simple_repeat	1	134	(0)	132743
12	14.1	3.0	2.9	chr1	70204699	70204731	(178751691)	+	(TCTCCC)n	Simple_repeat	1	34	(0)	133002
33	0.0	0.0	0.0	chr1	70204733	70204760	(178751662)	+	(AC)n	Simple_repeat	1	28	(0)	133003
43	2.5	0.0	0.0	chr1	70943838	70943878	(178012544)	+	(GA)n	Simple_repeat	1	41	(0)	134172
1352	27.7	10.4	2.2	chr1	71082754	71083482	(177872940)	C	L1MEf	LINE/L1	(5413)	1227	514	134386
38	0.0	0.0	0.0	chr1	71083510	71083542	(177872880)	+	(AG)n	Simple_repeat	1	33	(0)	134387
730	24.3	8.2	2.7	chr1	71083672	71083891	(177872531)	C	L1MEf	LINE/L1	(5951)	689	457	134386
2030	22.5	6.6	2.5	chr1	71083906	71084474	(177871948)	+	L1ME3A	LINE/L1	5411	6004	(169)	134388
1597	15.1	14.1	1.3	chr1	75503324	75503631	(173452791)	+	MSTA	LTR/ERVL-MaLR	75	428	(0)	140004
62	3.3	0.0	0.0	chr1	75615417	75615478	(173340944)	+	(AC)n	Simple_repeat	1	62	(0)	140184
16	5.3	0.0	0.0	chr1	75615479	75615498	(173340924)	+	(GA)n	Simple_repeat	1	20	(0)	140185
815	20.9	0.0	3.7	chr1	75784717	75784879	(173171543)	C	AluJb	SINE/Alu	(19)	293	137	140452
796	13.3	0.8	4.4	chr1	75784885	75784943	(173171479)	C	AluJo	SINE/Alu	(181)	131	78	140453
2138	18.2	12.3	10.9	chr1	75784944	75785027	(173171395)	+	LTR8	LTR/ERV1	1	75	(616)	140454
2227	5.9	3.2	0.0	chr1	75785028	75785300	(173171122)	C	AluY	SINE/Alu	(20)	291	10	140455
15314	8.1	1.6	1.4	chr1	78084631	78087069	(170869353)	C	L1PREC2	LINE/L1	(1688)	6453	4009	144068
558	26.4	11.6	1.5	chr1	84103160	84103405	(164853017)	+	MLT1G	LTR/ERVL-MaLR	1	284	(307)	152069
594	25.7	10.3	0.0	chr1	84103590	84103764	(164852658)	+	MLT1G	LTR/ERVL-MaLR	397	591	(0)	152069
61	0.0	0.0	0.0	chr1	84699748	84699799	(164256623)	+	(CA)n	Simple_repeat	1	52	(0)	152934
23	0.0	0.0	0.0	chr1	84699800	84699824	(164256598)	+	(AG)n	Simple_repeat	1	25	(0)	152935
350	28.2	9.3	0.8	chr1	85049671	85049788	(163906634)	+	MIRb	SINE/MIR	15	143	(125)	153508
20	3.6	3.2	3.1	chr1	85049810	85049840	(163906582)	+	(GA)n	Simple_repeat	1	32	(0)	153509
2495	10.8	6.6	2.7	chr1	85049842	85050290	(163906132)	C	LTR21A	LTR/ERV1	(13)	468	1	153510
2218	12.0	0.0	0.0	chr1	85278459	85278750	(163677672)	C	AluSx	SINE/Alu	(19)	293	2	153927
16	14.1	0.0	6.5	chr1	85278751	85278775	(163677647)	+	(TTAA)n	Simple_repeat	1	22	(0)	153928
698	23.0	8.0	0.5	chr1	85279066	85279262	(163677160)	C	L2a	LINE/L2	(547)	2872	2660	153924
2921	11.9	14.0	3.6	chr1	85279411	85279958	(163676464)	C	LTR18B	LTR/ERVL	(0)	614	1	153930
327	18.3	6.0	18.4	chr1	85279959	85280010	(163676412)	C	L2	LINE/L2	(702)	2717	2671	153929
13	8.8	0.0	3.9	chr1	86461422	86461447	(162494975)	+	(AAG)n	Simple_repeat	1	26	(0)	155636
2658	11.1	2.7	0.0	chr1	86461466	86461862	(162494560)	C	MER61E	LTR/ERV1	(161)	408	1	155637
13	29.5	1.4	4.2	chr1	86914936	86915006	(162041416)	+	(CCCCGCT)n	Simple_repeat	1	72	(0)	156335
1713	14.5	3.6	13.6	chr1	87203110	87203484	(161752938)	+	MER44A	DNA/TcMar-Tigger	4	339	(0)	156720
861	33.9	11.7	3.6	chr1	88557820	88558142	(160398280)	+	L2	LINE/L2	1398	1748	(1671)	158615
31	3.3	0.0	0.0	chr1	88558143	88558173	(160398249)	+	(CT)n	Simple_repeat	1	31	(0)	158616
861	33.9	11.7	3.6	chr1	88558174	88559284	(160397138)	+	L2	LINE/L2	1749	2963	(456)	158615
15	30.7	0.0	1.8	chr1	89021718	89021772	(159934650)	+	GA-rich	Low_complexity	1	55	(0)	159391
51	0.0	0.0	0.0	chr1	89021789	89021832	(159934590)	+	(GA)n	Simple_repeat	1	44	(0)	159392
41	25.2	2.7	0.0	chr1	89045526	89045637	(159910785)	+	GA-rich	Low_complexity	1	115	(0)	159427
36	16.1	8.0	0.9	chr1	89064138	89064199	(159892223)	+	GA-rich	Low_complexity	1	68	(0)	159451
49	0.0	0.0	0.0	chr1	89064200	89064241	(159892181)	+	(TG)n	Simple_repeat	1	42	(0)	159452
36	16.1	8.0	0.9	chr1	89064242	89064278	(159892144)	+	GA-rich	Low_complexity	69	106	(0)	159453
436	29.8	5.0	0.0	chr1	89896310	89896468	(159059954)	C	MIR3	SINE/MIR	(27)	181	18	160507
635	15.1	0.0	3.2	chr1	91569351	91569473	(157386949)	C	MIRb	SINE/MIR	(109)	159	41	162917
29	5.5	0.0	0.0	chr1	91569580	91569595	(157386827)	+	(GA)n	Simple_repeat	1	16	(0)	162918
31	0.0	0.0	0.0	chr1	91569596	91569622	(157386800)	+	(GT)n	Simple_repeat	1	27	(0)	162919
29	5.5	0.0	0.0	chr1	91569623	91569644	(157386778)	+	(GA)n	Simple_repeat	1	22	(0)	162920
971	19.5	1.1	0.0	chr1	91732303	91732487	(157223935)	C	MER5A	DNA/hAT-Charlie	(1)	188	2	163160
1606	14.8	0.0	2.7	chr1	92455223	92455478	(156500944)	+	AluJo	SINE/Alu	39	287	(25)	164512
68	3.0	0.0	0.0	chr1	92455481	92455547	(156500875)	+	(AG)n	Simple_repeat	1	67	(0)	164513
1159	23.5	3.7	5.0	chr1	92455548	92455694	(156500728)	C	L1M4	LINE/L1	(2445)	3701	3548	164504
1457	17.9	6.5	6.2	chr1	92455696	92456034	(156500388)	+	L1MA10	LINE/L1	5994	6333	(1)	164514
43	0.0	0.0	0.0	chr1	92478758	92478794	(156477628)	+	(AG)n	Simple_repeat	1	37	(0)	164554
2201	11.5	1.0	0.0	chr1	92478870	92479165	(156477257)	C	AluSz6	SINE/Alu	(13)	299	1	164555
1970	21.8	7.2	3.8	chr1	93710753	93711273	(155245149)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	7	166719
19	0.0	0.0	0.0	chr1	95061481	95061501	(153894921)	+	(GA)n	Simple_repeat	1	21	(0)	168778
324	33.0	9.8	1.4	chr1	95061646	95061860	(153894562)	C	MLT1O	LTR/ERVL-MaLR	(174)	368	134	168779
37	0.0	0.0	0.0	chr1	97525759	97525790	(151430632)	+	(AG)n	Simple_repeat	1	32	(0)	172152
30	14.4	0.0	0.0	chr1	97525866	97525913	(151430509)	+	(GT)n	Simple_repeat	1	48	(0)	172153
44	0.0	0.0	0.0	chr1	97525979	97526016	(151430406)	+	(GT)n	Simple_repeat	1	38	(0)	172154
2026	20.4	2.3	0.5	chr1	99372706	99372917	(149583505)	+	MSTD	LTR/ERVL-MaLR	1	217	(179)	174744
41	11.2	0.0	0.0	chr1	99372918	99372984	(149583438)	+	(CT)n	Simple_repeat	1	67	(0)	174745
2026	20.4	2.3	0.5	chr1	99372985	99373160	(149583262)	+	MSTD	LTR/ERVL-MaLR	218	395	(1)	174744
366	32.8	2.8	2.8	chr1	99558691	99558866	(149397556)	+	LTR78	LTR/ERV1	1116	1291	(13)	175003
35	8.8	0.0	0.0	chr1	99558889	99558936	(149397486)	+	(TC)n	Simple_repeat	1	48	(0)	175008
34	0.0	0.0	0.0	chr1	99577296	99577324	(149379098)	+	(CT)n	Simple_repeat	1	29	(0)	175028
28	23.4	0.0	0.0	chr1	99577325	99577385	(149379037)	+	(AC)n	Simple_repeat	1	61	(0)	175029
201	30.0	4.3	6.2	chr1	100037817	100037912	(148918510)	+	MIRb	SINE/MIR	96	189	(79)	175849
1891	17.3	0.0	2.5	chr1	100130399	100130716	(148825706)	+	AluJo	SINE/Alu	1	310	(2)	176004
1148	17.0	4.9	0.0	chr1	100130749	100130960	(148825462)	C	MER58A	DNA/hAT-Charlie	(0)	224	2	176005
43	2.5	0.0	0.0	chr1	100459087	100459127	(148497295)	+	(AC)n	Simple_repeat	1	41	(0)	176615
18	8.5	0.0	0.0	chr1	100459128	100459152	(148497270)	+	(GA)n	Simple_repeat	1	25	(0)	176616
516	29.7	9.1	4.0	chr1	100459204	100459447	(148496975)	+	MIRb	SINE/MIR	2	267	(1)	176617
28	14.8	0.0	0.0	chr1	101137025	101137070	(147819352)	+	(TC)n	Simple_repeat	1	46	(0)	177547
583	20.8	4.9	2.5	chr1	101223434	101223591	(147732831)	C	MLT1F1	LTR/ERVL-MaLR	(12)	557	396	177713
104	2.0	1.0	0.0	chr1	101223673	101223773	(147732649)	+	(TC)n	Simple_repeat	1	102	(0)	177714
19	0.0	0.0	0.0	chr1	101223774	101223797	(147732625)	+	(CTC)n	Simple_repeat	1	24	(0)	177715
1555	20.2	5.2	10.4	chr1	101223818	101224249	(147732173)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	177716
11	9.1	2.3	11.1	chr1	101259318	101259361	(147697061)	+	(ACACAT)n	Simple_repeat	1	45	(0)	177766
3579	24.6	10.0	3.2	chr1	108504044	108505318	(140451104)	+	L2a	LINE/L2	1817	3194	(232)	186844
49	0.0	0.0	0.0	chr1	108505319	108505360	(140451062)	+	(AC)n	Simple_repeat	1	42	(0)	186845
1648	26.2	6.8	0.6	chr1	108505361	108505574	(140450848)	+	L2a	LINE/L2	3195	3425	(1)	186844
234	32.0	3.9	3.2	chr1	108558008	108558133	(140398289)	+	L2b	LINE/L2	1983	2109	(1310)	186915
312	28.9	8.9	2.6	chr1	108558140	108558348	(140398074)	+	L2b	LINE/L2	3198	3394	(32)	186915
282	25.5	3.8	6.4	chr1	108625570	108625678	(140330744)	+	L2	LINE/L2	1745	1850	(1569)	187037
63	0.0	0.0	0.0	chr1	108625775	108625828	(140330594)	+	(TG)n	Simple_repeat	1	54	(0)	187038
14	17.1	0.0	6.7	chr1	108699742	108699786	(140256636)	+	A-rich	Low_complexity	1	45	(0)	187170
2055	11.2	0.0	1.1	chr1	109113108	109113392	(139843030)	+	AluJb	SINE/Alu	1	282	(30)	188008
84	1.3	0.0	0.0	chr1	109113393	109113468	(139842954)	+	(AG)n	Simple_repeat	1	76	(0)	188009
367	33.3	9.5	4.9	chr1	109170391	109170813	(139785609)	C	L2c	LINE/L2	(161)	3226	2727	188157
239	34.4	4.4	5.1	chr1	109239999	109240136	(139716286)	C	MIR	SINE/MIR	(11)	251	115	188288
2185	14.1	0.0	0.0	chr1	109445981	109446284	(139510138)	+	AluSg4	SINE/Alu	6	309	(1)	188594
819	28.6	11.9	10.0	chr1	109446285	109446476	(139509946)	+	MLT1K	LTR/ERVL-MaLR	426	595	(0)	188592
2518	7.0	0.0	0.6	chr1	109494555	109494868	(139461554)	+	AluSz	SINE/Alu	1	312	(0)	188672
13	22.1	4.3	5.5	chr1	110186423	110186492	(138769930)	+	A-rich	Low_complexity	1	73	(0)	189706
20	17.4	0.0	2.4	chr1	110186665	110186705	(138769717)	+	(TC)n	Simple_repeat	1	41	(0)	189707
297	35.0	16.9	0.4	chr1	110186708	110186974	(138769448)	C	L2c	LINE/L2	(37)	3350	3031	189708
60	5.5	0.0	0.0	chr1	110620034	110620109	(138336313)	+	(GA)n	Simple_repeat	1	76	(0)	190477
192	4.7	8.4	0.0	chr1	110773773	110774080	(138182342)	+	(AG)n	Simple_repeat	1	334	(0)	190716
569	8.4	0.0	0.0	chr1	111042797	111042867	(137913555)	C	AluYi6	SINE/Alu	(15)	296	226	191043
1891	13.4	10.2	5.9	chr1	111042868	111043052	(137913370)	C	MSTA	LTR/ERVL-MaLR	(38)	390	199	191044
2316	9.3	0.0	0.0	chr1	111043053	111043341	(137913081)	C	AluSz	SINE/Alu	(23)	289	1	191045
47	2.1	2.1	0.0	chr1	111215998	111216045	(137740377)	+	(CT)n	Simple_repeat	1	49	(0)	191255
317	25.3	2.1	1.1	chr1	111224204	111224295	(137732127)	+	L1ME4b	LINE/L1	417	509	(383)	191267
17	9.1	0.0	0.0	chr1	111224401	111224424	(137731998)	+	(GT)n	Simple_repeat	1	24	(0)	191268
18	7.2	6.7	0.0	chr1	111224427	111224456	(137731966)	+	(AG)n	Simple_repeat	1	32	(0)	191269
2314	9.6	0.0	1.3	chr1	111224586	111224887	(137731535)	C	AluSp	SINE/Alu	(15)	298	1	191270
1846	15.8	9.8	1.8	chr1	111369976	111370367	(137586055)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	191423
233	27.9	0.0	0.0	chr1	111370368	111370435	(137585987)	+	L2c	LINE/L2	3320	3387	(0)	191424
672	17.0	9.4	0.0	chr1	111463340	111463474	(137492948)	C	MLT2F	LTR/ERVL	(514)	149	1	191561
15	35.9	1.4	1.3	chr1	111497644	111497717	(137458705)	+	A-rich	Low_complexity	1	75	(0)	191615
19	18.4	7.8	0.0	chr1	111497650	111497700	(137458722)	+	GA-rich	Low_complexity	1	55	(0)	191616
426	35.2	13.2	0.3	chr1	111541493	111541665	(137414757)	C	L2	LINE/L2	(953)	2466	2278	191673
43	4.5	0.0	0.0	chr1	111541666	111541711	(137414711)	+	(GA)n	Simple_repeat	1	46	(0)	191676
426	35.2	13.2	0.3	chr1	111541712	111541868	(137414554)	C	L2	LINE/L2	(1142)	2277	2087	191673
14	14.2	0.0	8.7	chr1	112322154	112322199	(136634223)	+	GA-rich	Low_complexity	1	46	(0)	192878
20	15.9	0.0	0.0	chr1	112706396	112706430	(136249992)	+	(TC)n	Simple_repeat	1	35	(0)	193618
123	0.0	0.9	0.0	chr1	112706431	112706538	(136249884)	+	(AC)n	Simple_repeat	1	109	(0)	193619
85	0.0	4.5	0.0	chr1	112881243	112881331	(136075091)	+	(TTTC)n	Simple_repeat	1	93	(0)	193973
69	1.9	9.5	0.0	chr1	112881332	112881436	(136074986)	+	(CT)n	Simple_repeat	1	115	(0)	193974
2270	9.5	0.3	0.0	chr1	112881437	112881721	(136074701)	C	AluSp	SINE/Alu	(23)	290	5	193975
2036	20.1	9.8	6.7	chr1	113217759	113218338	(135738084)	+	LTR36	LTR/ERV1	1	600	(11)	194686
13	11.6	2.2	8.7	chr1	113390176	113390220	(135566202)	+	(CCCCT)n	Simple_repeat	1	46	(0)	194976
184	13.8	0.0	0.0	chr1	113675870	113675898	(135280524)	+	MIRc	SINE/MIR	122	150	(118)	195341
41	2.2	2.1	2.0	chr1	113676032	113676079	(135280343)	+	(TC)n	Simple_repeat	1	49	(0)	195342
13	25.3	1.8	3.6	chr1	113812295	113812349	(135144073)	+	(GCCC)n	Simple_repeat	1	56	(0)	195565
24	0.0	0.0	0.0	chr1	114092312	114092338	(134864084)	+	(CT)n	Simple_repeat	1	27	(0)	196053
35	0.0	0.0	0.0	chr1	114092339	114092368	(134864054)	+	(TG)n	Simple_repeat	1	30	(0)	196054
3204	15.8	4.3	7.1	chr1	114367506	114369149	(134587273)	C	Harlequin-int	LTR/ERV1	(3752)	1350	1	196466
1186	17.8	21.8	11.7	chr1	114379984	114380421	(134576001)	+	LTR36	LTR/ERV1	123	611	(0)	196475
35	5.3	0.0	0.0	chr1	115166658	115166696	(133789726)	+	(AC)n	Simple_repeat	1	39	(0)	197782
526	25.4	3.4	0.7	chr1	115166728	115166870	(133789552)	C	MIRc	SINE/MIR	(120)	148	2	197783
282	16.4	3.2	0.0	chr1	116418187	116418247	(132538175)	C	MIRb	SINE/MIR	(35)	233	171	199658
2446	7.9	0.0	1.3	chr1	116672300	116672603	(132283819)	C	AluSx1	SINE/Alu	(12)	300	1	200079
21	0.0	0.0	0.0	chr1	116672626	116672648	(132283774)	+	(AG)n	Simple_repeat	1	23	(0)	200080
23	9.7	0.0	0.0	chr1	116757753	116757785	(132198637)	+	(AG)n	Simple_repeat	1	33	(0)	200215
1848	15.4	0.7	0.0	chr1	116757788	116758066	(132198356)	C	AluSz6	SINE/Alu	(30)	282	2	200216
40	6.2	0.0	0.0	chr1	116830699	116830749	(132125673)	+	(TC)n	Simple_repeat	1	51	(0)	200340
47	0.0	0.0	0.0	chr1	116830750	116830789	(132125633)	+	(CA)n	Simple_repeat	1	40	(0)	200341
252	23.1	1.9	0.0	chr1	116830791	116830842	(132125580)	+	LTR33	LTR/ERVL	463	515	(0)	200342
1302	23.1	9.6	4.6	chr1	116830849	116831096	(132125326)	+	L1ME3D	LINE/L1	5397	5653	(589)	200343
38	2.8	0.0	0.0	chr1	116957105	116957141	(131999281)	+	(CT)n	Simple_repeat	1	37	(0)	200547
35	5.3	0.0	0.0	chr1	116957152	116957190	(131999232)	+	(TG)n	Simple_repeat	1	39	(0)	200548
357	35.0	3.2	11.7	chr1	117648362	117648680	(131307742)	C	L2c	LINE/L2	(0)	3387	3090	201609
2528	6.4	0.0	0.0	chr1	117648681	117648993	(131307429)	+	L1PA5	LINE/L1	5842	6154	(0)	201610
54	0.0	0.0	0.0	chr1	118217914	118217959	(130738463)	+	(TG)n	Simple_repeat	1	46	(0)	202467
18	0.0	0.0	0.0	chr1	118217960	118217979	(130738443)	+	(AG)n	Simple_repeat	1	20	(0)	202468
39	8.3	6.4	0.0	chr1	118988141	118988218	(129968204)	+	(TC)n	Simple_repeat	1	83	(0)	203448
14	19.6	6.4	0.0	chr1	118988320	118988366	(129968056)	+	GA-rich	Low_complexity	1	50	(0)	203449
249	15.9	2.8	0.0	chr1	119001944	119002012	(129954410)	C	LTR28B	LTR/ERV1	(649)	325	255	203462
51	0.0	0.0	0.0	chr1	119002013	119002056	(129954366)	+	(CA)n	Simple_repeat	1	44	(0)	203463
19	11.2	0.0	0.0	chr1	119068811	119068839	(129887583)	+	(TC)n	Simple_repeat	1	29	(0)	203558
38	2.8	0.0	0.0	chr1	119068840	119068876	(129887546)	+	(CA)n	Simple_repeat	1	37	(0)	203559
12	14.7	3.3	0.0	chr1	119068958	119068987	(129887435)	+	A-rich	Low_complexity	1	31	(0)	203560
380	28.5	7.1	0.0	chr1	119364876	119365005	(129591417)	C	L2b	LINE/L2	(11)	3364	3225	204028
30	2.9	0.0	0.0	chr1	119365029	119365063	(129591359)	+	(TC)n	Simple_repeat	1	35	(0)	204029
40	0.0	0.0	0.0	chr1	119365064	119365097	(129591325)	+	(CA)n	Simple_repeat	1	34	(0)	204030
1273	6.1	0.0	1.8	chr1	120850818	120850985	(128105437)	C	U1	snRNA	(0)	165	1	206170
961	20.0	0.0	0.0	chr1	120942600	120942764	(128013658)	+	U1	snRNA	1	165	(0)	206303
267	23.3	1.9	9.5	chr1	120942901	120943016	(128013406)	+	AluSz	SINE/Alu	16	122	(190)	206304
32	3.2	0.0	0.0	chr1	143727467	143727498	(105228924)	+	(GA)n	Simple_repeat	1	32	(0)	208243
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
3348	18.3	2.4	4.1	chr1	144532985	144533667	(104422755)	+	LTR51	LTR/ERV1	1	671	(0)	209558
53	3.8	0.0	0.0	chr1	144558696	144558749	(104397673)	+	(GA)n	Simple_repeat	1	54	(0)	209622
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
1502	1.2	0.0	0.0	chr1	145465617	145465780	(103490642)	C	U1	snRNA	(1)	164	1	210998
233	29.0	4.1	0.0	chr1	145721641	145721733	(103234689)	C	MIRc	SINE/MIR	(135)	133	37	211410
1188	16.7	3.4	15.8	chr1	145991760	145992094	(102964328)	+	AluJo	SINE/Alu	2	293	(19)	211891
634	0.0	0.0	0.0	chr1	146035692	146035763	(102920659)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	211988
2228	8.4	0.7	0.7	chr1	146035980	146036276	(102920146)	C	AluSq	SINE/Alu	(16)	297	1	211989
1391	13.4	6.5	6.5	chr1	146038686	146038852	(102917570)	+	AluJb	SINE/Alu	127	291	(21)	211994
220	22.9	3.7	11.0	chr1	146051838	146051955	(102904467)	C	AluSg4	SINE/Alu	(190)	120	12	212031
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
62	3.3	0.0	0.0	chr1	146378881	146378942	(102577480)	+	(TC)n	Simple_repeat	1	62	(0)	212538
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
181	31.5	6.3	2.2	chr1	147532929	147533019	(101423403)	+	L2a	LINE/L2	3292	3386	(40)	214237
65	0.0	0.0	0.0	chr1	147533195	147533249	(101423173)	+	(TC)n	Simple_repeat	1	55	(0)	214238
278	25.3	1.2	14.1	chr1	147533327	147533390	(101423032)	C	MLT1O	LTR/ERVL-MaLR	(303)	239	183	214239
40	0.0	0.0	0.0	chr1	147540232	147540265	(101416157)	+	(TC)n	Simple_repeat	1	34	(0)	214255
2235	8.7	0.4	0.4	chr1	147970214	147970490	(100985932)	+	AluSx1	SINE/Alu	1	277	(35)	214923
77	3.9	0.0	0.0	chr1	147970492	147970570	(100985852)	+	(TC)n	Simple_repeat	1	79	(0)	214924
1505	0.6	0.0	0.0	chr1	148038753	148038916	(100917506)	C	U1	snRNA	(1)	164	1	215030
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
1359	4.3	1.2	0.0	chr1	148388490	148388651	(100567771)	C	U1	snRNA	(1)	164	1	215621
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
312	22.4	1.6	11.2	chr1	149637049	149637182	(99319240)	+	AluSz	SINE/Alu	2	122	(190)	217502
1824	15.5	1.8	0.4	chr1	149837730	149838006	(99118416)	+	AluJo	SINE/Alu	2	282	(30)	217834
30	7.8	0.0	0.0	chr1	149838007	149838047	(99118375)	+	(TC)n	Simple_repeat	1	41	(0)	217835
42	0.0	0.0	0.0	chr1	149838048	149838083	(99118339)	+	(CA)n	Simple_repeat	1	36	(0)	217836
14	24.4	0.0	0.0	chr1	150257968	150258006	(98698416)	+	(ACAGAG)n	Simple_repeat	1	39	(0)	218641
31	11.0	2.0	0.0	chr1	150258020	150258068	(98698354)	+	(CT)n	Simple_repeat	1	50	(0)	218642
419	14.4	5.5	2.8	chr1	150373677	150373783	(98582639)	C	L1MB8	LINE/L1	(2)	6176	6067	218901
284	20.0	0.0	0.0	chr1	150373792	150373861	(98582561)	C	L2a	LINE/L2	(1089)	2330	2261	218897
4471	18.1	4.8	0.2	chr1	150373919	150374737	(98581685)	+	MER21B	LTR/ERVL	1	858	(10)	218902
18	4.5	0.0	0.0	chr1	150788161	150788183	(98168239)	+	(GT)n	Simple_repeat	1	23	(0)	219831
2049	8.4	1.8	3.9	chr1	150788199	150788482	(98167940)	C	AluSx	SINE/Alu	(30)	282	5	219832
1444	19.2	0.0	3.4	chr1	150984880	150985171	(97971251)	+	AluJb	SINE/Alu	1	282	(30)	220251
17	0.0	0.0	0.0	chr1	150985172	150985190	(97971232)	+	(TC)n	Simple_repeat	1	19	(0)	220252
35	0.0	0.0	0.0	chr1	150985191	150985220	(97971202)	+	(CA)n	Simple_repeat	1	30	(0)	220253
1149	28.3	5.2	1.2	chr1	150998970	150999302	(97957120)	+	MLT1I	LTR/ERVL-MaLR	60	406	(5)	220281
17	25.7	0.0	0.0	chr1	151282307	151282352	(97674070)	+	(GCG)n	Simple_repeat	1	46	(0)	220903
14	16.4	2.9	0.0	chr1	151704696	151704729	(97251693)	+	(AGACAC)n	Simple_repeat	1	35	(0)	221765
21	4.0	0.0	0.0	chr1	151704821	151704846	(97251576)	+	(GA)n	Simple_repeat	1	26	(0)	221766
23	7.2	0.0	0.0	chr1	151941303	151941332	(97015090)	+	(CA)n	Simple_repeat	1	30	(0)	222160
47	4.3	0.0	0.0	chr1	151941390	151941438	(97014984)	+	(AC)n	Simple_repeat	1	49	(0)	222161
41	4.6	4.1	4.0	chr1	151979104	151979176	(96977246)	+	(TC)n	Simple_repeat	1	76	(0)	222221
1106	28.8	4.5	2.7	chr1	151979247	151979657	(96976765)	C	L1ME4a	LINE/L1	(215)	5909	5491	222222
1172	25.4	11.0	5.5	chr1	152011393	152011829	(96944593)	C	MLT1E3	LTR/ERVL-MaLR	(3)	621	158	222268
2005	11.2	16.4	0.0	chr1	152011836	152012193	(96944229)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	222269
24	19.6	0.0	0.0	chr1	152961107	152961153	(95995269)	+	(CA)n	Simple_repeat	1	47	(0)	223453
41	2.6	0.0	0.0	chr1	152979819	152979858	(95976564)	+	(TC)n	Simple_repeat	1	40	(0)	223488
30	0.0	0.0	0.0	chr1	152979859	152979891	(95976531)	+	(AC)n	Simple_repeat	1	33	(0)	223489
82	16.8	1.4	0.0	chr1	153520162	153520308	(95436114)	+	GA-rich	Low_complexity	1	149	(0)	224223
2813	7.3	5.1	3.1	chr1	153520310	153520732	(95435690)	C	MER4A1	LTR/ERV1	(39)	433	2	224221
17	8.9	0.0	0.0	chr1	153616716	153616745	(95339677)	+	(TC)n	Simple_repeat	1	30	(0)	224403
25	6.5	0.0	0.0	chr1	153616751	153616783	(95339639)	+	(CA)n	Simple_repeat	1	33	(0)	224404
1916	8.8	6.1	1.4	chr1	153660787	153661069	(95295353)	C	AluSx1	SINE/Alu	(15)	297	1	224491
25	25.5	3.5	2.2	chr1	153678730	153678816	(95277606)	+	(CT)n	Simple_repeat	1	90	(0)	224529
82	1.4	0.0	0.0	chr1	153690069	153690142	(95266280)	+	(TC)n	Simple_repeat	1	74	(0)	224541
23	0.0	0.0	0.0	chr1	153690143	153690167	(95266255)	+	(CA)n	Simple_repeat	1	25	(0)	224542
21	25.1	1.6	0.0	chr1	153946317	153946377	(95010045)	+	(GGCG)n	Simple_repeat	1	62	(0)	225116
12	17.9	5.0	2.4	chr1	153946514	153946553	(95009869)	+	(CGCTG)n	Simple_repeat	1	42	(0)	225117
19	25.9	0.0	4.5	chr1	153958837	153958903	(94997519)	+	GA-rich	Low_complexity	1	67	(0)	225135
17	14.3	4.9	6.2	chr1	153963672	153963732	(94992690)	+	(GAGCGG)n	Simple_repeat	1	64	(0)	225138
605	20.3	8.9	1.2	chr1	154657624	154657791	(94298631)	C	MLT1I	LTR/ERVL-MaLR	(133)	278	107	226568
34	0.0	0.0	0.0	chr1	154657807	154657835	(94298587)	+	(TC)n	Simple_repeat	1	29	(0)	226569
26	8.3	0.0	0.0	chr1	154657836	154657871	(94298551)	+	(TG)n	Simple_repeat	1	36	(0)	226570
389	21.4	0.0	0.0	chr1	154657915	154657984	(94298438)	+	MLT1H1	LTR/ERVL-MaLR	204	273	(282)	226571
48	4.1	0.0	0.0	chr1	154868901	154868950	(94087472)	+	(TC)n	Simple_repeat	1	50	(0)	226921
15	7.6	0.0	6.2	chr1	155001128	155001159	(93955263)	+	(GAGG)n	Simple_repeat	1	32	(0)	227186
17	23.2	0.0	2.1	chr1	155017543	155017589	(93938833)	+	(GCC)n	Simple_repeat	1	47	(0)	227202
561	29.6	4.1	6.0	chr1	155837209	155837456	(93118966)	+	MER66-int	LTR/ERV1	2905	3147	(3529)	228920
16	0.0	0.0	0.0	chr1	155837615	155837632	(93118790)	+	(TC)n	Simple_repeat	1	18	(0)	228924
888	17.6	4.6	0.5	chr1	155837727	155837915	(93118507)	+	LTR38-int	LTR/ERV1	1101	1297	(489)	228925
19	9.2	2.9	0.0	chr1	156082822	156082856	(92873566)	+	(GGGGGCC)n	Simple_repeat	1	36	(0)	229435
20	19.1	1.7	3.4	chr1	156082887	156082944	(92873478)	+	(CGCTCCC)n	Simple_repeat	1	59	(0)	229436
191	23.4	0.0	2.1	chr1	156086334	156086381	(92870041)	C	Tigger19a	DNA/TcMar-Tigger	(56)	267	221	229443
37	0.0	0.0	0.0	chr1	156086394	156086425	(92869997)	+	(CT)n	Simple_repeat	1	32	(0)	229444
2324	9.2	0.7	0.7	chr1	156086635	156086940	(92869482)	C	AluSx	SINE/Alu	(6)	306	1	229445
7472	4.4	4.5	0.2	chr1	156192165	156193112	(92763310)	+	LTR13	LTR/ERVK	1	991	(16)	229674
231	28.1	15.1	1.0	chr1	156457093	156457189	(92499233)	C	L2c	LINE/L2	(14)	3373	3261	230180
417	24.8	1.3	12.3	chr1	156571885	156572063	(92384359)	+	MER5A	DNA/hAT-Charlie	1	159	(30)	230360
33	0.0	0.0	0.0	chr1	156578231	156578258	(92378164)	+	(AG)n	Simple_repeat	1	28	(0)	230372
29	10.6	0.0	0.0	chr1	156578259	156578300	(92378122)	+	(TG)n	Simple_repeat	1	42	(0)	230373
22	3.9	0.0	0.0	chr1	156578300	156578326	(92378096)	+	(GA)n	Simple_repeat	1	27	(0)	230374
1594	18.6	3.5	0.7	chr1	156578380	156578486	(92377936)	+	AluJb	SINE/Alu	2	117	(195)	230375
17	0.0	0.0	0.0	chr1	156625766	156625784	(92330638)	+	(GT)n	Simple_repeat	1	19	(0)	230475
18	20.8	2.2	0.0	chr1	156638812	156638857	(92317565)	+	(CTCT)n	Simple_repeat	1	47	(0)	230506
444	29.6	1.5	0.0	chr1	156638872	156639006	(92317416)	+	MIRc	SINE/MIR	9	145	(123)	230507
24	0.0	0.0	0.0	chr1	156643610	156643635	(92312787)	+	(AC)n	Simple_repeat	1	26	(0)	230515
38	0.0	0.0	0.0	chr1	156643636	156643668	(92312754)	+	(AG)n	Simple_repeat	1	33	(0)	230516
14	4.5	4.3	0.0	chr1	156693381	156693403	(92263019)	+	(TCC)n	Simple_repeat	1	24	(0)	230586
13	21.5	1.9	5.5	chr1	156693438	156693491	(92262931)	+	(TCCCC)n	Simple_repeat	1	55	(0)	230587
37	0.0	0.0	2.8	chr1	156817048	156817083	(92139339)	+	(TC)n	Simple_repeat	1	36	(0)	230815
17	7.8	0.0	0.0	chr1	156863405	156863431	(92092991)	+	(TCTC)n	Simple_repeat	1	27	(0)	230887
13	21.3	1.9	5.5	chr1	156863458	156863511	(92092911)	+	(CTCCT)n	Simple_repeat	1	55	(0)	230888
29	0.0	0.0	0.0	chr1	156886588	156886612	(92069810)	+	(GT)n	Simple_repeat	1	25	(0)	230927
29	17.7	0.0	0.0	chr1	156886619	156886676	(92069746)	+	GA-rich	Low_complexity	1	58	(0)	230928
2336	2.4	0.0	0.0	chr1	156996540	156996794	(91959628)	+	AluY	SINE/Alu	49	303	(8)	231097
587	28.8	5.7	5.3	chr1	156996795	156996859	(91959563)	+	MIRc	SINE/MIR	49	118	(150)	231096
1882	15.9	1.0	3.2	chr1	156996860	156997168	(91959254)	C	AluJo	SINE/Alu	(10)	302	1	231098
2028	14.0	11.5	3.1	chr1	157055660	157056049	(91900373)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	231194
1559	18.9	0.0	3.1	chr1	157229799	157230084	(91726338)	+	AluJo	SINE/Alu	1	277	(35)	231460
53	5.8	1.4	1.3	chr1	157230091	157230164	(91726258)	+	(GA)n	Simple_repeat	1	75	(0)	231461
12	28.4	5.7	1.4	chr1	157230200	157230269	(91726153)	+	GA-rich	Low_complexity	1	74	(0)	231462
10773	17.6	3.6	2.8	chr1	157275504	157279383	(91677039)	C	HERVFH21-int	LTR/ERV1	(2393)	4261	1	231521
2771	12.7	1.4	5.8	chr1	157279384	157279886	(91676536)	C	LTR21A	LTR/ERV1	(0)	481	1	231522
56	22.6	2.2	0.0	chr1	157473425	157473563	(91482859)	+	GA-rich	Low_complexity	1	142	(0)	231755
17	0.0	0.0	0.0	chr1	158686558	158686576	(90269846)	+	(AG)n	Simple_repeat	1	19	(0)	233386
740	24.3	4.5	4.1	chr1	158728598	158728816	(90227606)	+	MIR	SINE/MIR	12	231	(31)	233450
31	0.0	0.0	0.0	chr1	158728972	158728998	(90227424)	+	(GA)n	Simple_repeat	1	27	(0)	233451
258	32.2	2.5	7.3	chr1	158729103	158729226	(90227196)	C	L2	LINE/L2	(541)	2878	2761	233452
14	24.1	0.0	0.0	chr1	159882383	159882421	(89074001)	+	(ATTT)n	Simple_repeat	1	39	(0)	234890
279	29.7	9.9	12.9	chr1	159926734	159926942	(89029480)	+	L2c	LINE/L2	3183	3384	(3)	234964
19	0.0	0.0	0.0	chr1	159927077	159927097	(89029325)	+	(CA)n	Simple_repeat	1	21	(0)	234965
40	0.0	0.0	0.0	chr1	159927098	159927131	(89029291)	+	(AG)n	Simple_repeat	1	34	(0)	234966
37	0.0	0.0	0.0	chr1	160375463	160375494	(88580928)	+	(TC)n	Simple_repeat	1	32	(0)	235651
28	5.9	0.0	0.0	chr1	160375495	160375530	(88580892)	+	(AC)n	Simple_repeat	1	36	(0)	235652
1621	18.8	4.5	2.9	chr1	160433112	160433302	(88523120)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	182	235743
46	2.3	0.0	0.0	chr1	160433303	160433346	(88523076)	+	(AG)n	Simple_repeat	1	44	(0)	235744
1621	18.8	4.5	2.9	chr1	160433347	160433504	(88522918)	C	MLT1A	LTR/ERVL-MaLR	(193)	181	20	235743
269	33.0	2.1	3.1	chr1	160540626	160540722	(88415700)	C	L2b	LINE/L2	(4)	3371	3276	235897
60	11.9	3.0	0.0	chr1	160767253	160767353	(88189069)	+	(GA)n	Simple_repeat	1	104	(0)	236231
502	26.5	1.9	4.4	chr1	160767385	160767542	(88188880)	+	MIRb	SINE/MIR	85	238	(30)	236232
395	30.8	9.9	4.2	chr1	160813288	160813524	(88142898)	C	L2c	LINE/L2	(4)	3383	3132	236300
51	0.0	0.0	0.0	chr1	161053463	161053506	(87902916)	+	(TC)n	Simple_repeat	1	44	(0)	236770
1169	9.7	0.0	0.0	chr1	161216183	161216327	(87740095)	+	AluSx	SINE/Alu	154	298	(14)	237090
28	14.0	0.0	0.0	chr1	161216331	161216361	(87740061)	+	(TA)n	Simple_repeat	1	31	(0)	237091
54	2.0	0.0	0.0	chr1	161216362	161216412	(87740010)	+	(AC)n	Simple_repeat	1	51	(0)	237092
28	14.0	0.0	0.0	chr1	161216413	161216428	(87739994)	+	(TA)n	Simple_repeat	2	17	(0)	237093
21	0.0	0.0	0.0	chr1	161216428	161216450	(87739972)	+	(AG)n	Simple_repeat	1	23	(0)	237094
62	0.0	0.0	0.0	chr1	161311399	161311451	(87644971)	+	(TG)n	Simple_repeat	1	53	(0)	237273
642	0.0	0.0	0.0	chr1	161422093	161422164	(87534258)	C	tRNA-Glu-GAA	tRNA	(3)	72	1	237515
6644	8.0	2.8	2.5	chr1	161422259	161424316	(87532106)	+	SVA_D	Retroposon/SVA	14	1386	(0)	237516
20879	15.2	2.0	0.9	chr1	161483098	161487895	(87468527)	C	HUERS-P3-int	LTR/ERV1	(3810)	5109	1	237613
12	25.5	0.0	0.0	chr1	161726750	161726786	(87229636)	+	(CGCGG)n	Simple_repeat	1	37	(0)	237995
19	33.5	4.7	0.7	chr1	161727070	161727198	(87229224)	+	(CCCCCGC)n	Simple_repeat	1	135	(0)	237996
37	2.9	0.0	0.0	chr1	161736529	161736564	(87219858)	+	(GA)n	Simple_repeat	1	36	(0)	238011
369	28.2	3.7	0.8	chr1	161736625	161736756	(87219666)	+	LTR78	LTR/ERV1	1031	1166	(138)	238009
4576	10.9	1.7	1.4	chr1	162495428	162496059	(86460363)	C	MER41B	LTR/ERV1	(0)	634	1	239237
2633	20.3	2.4	14.3	chr1	162496060	162496121	(86460301)	C	MER4D1	LTR/ERV1	(673)	93	32	239234
2176	10.8	1.3	2.5	chr1	162496122	162496437	(86459985)	+	AluSp	SINE/Alu	1	312	(1)	239238
2300	8.9	1.0	0.3	chr1	162536986	162537278	(86419144)	+	AluSg	SINE/Alu	1	295	(15)	239314
1109	31.3	7.9	1.0	chr1	162537279	162537362	(86419060)	C	MamRep1527	LTR	(779)	190	106	239313
53	3.9	0.0	0.0	chr1	162537389	162537442	(86418980)	+	(GA)n	Simple_repeat	1	54	(0)	239315
506	33.6	0.7	0.0	chr1	162537556	162537704	(86418718)	+	MIR	SINE/MIR	63	212	(50)	239316
26	6.3	0.0	0.0	chr1	162673576	162673609	(86282813)	+	(TG)n	Simple_repeat	1	34	(0)	239593
40	6.1	0.0	0.0	chr1	162673609	162673659	(86282763)	+	(GA)n	Simple_repeat	1	51	(0)	239594
30	0.0	0.0	0.0	chr1	162673733	162673761	(86282661)	+	(AAAAC)n	Simple_repeat	1	29	(0)	239595
238	32.2	5.5	3.5	chr1	162702718	162702818	(86253604)	C	MIRc	SINE/MIR	(97)	171	62	239640
188	33.3	1.6	0.0	chr1	162702954	162703016	(86253406)	+	L2a	LINE/L2	3359	3422	(4)	239641
231	22.2	4.5	0.0	chr1	162716240	162716302	(86240120)	C	LTR35A	LTR/ERV1	(100)	447	382	239660
2001	19.3	4.0	6.7	chr1	163363038	163363405	(85593017)	C	MLT1F1	LTR/ERVL-MaLR	(9)	560	195	240648
35	0.0	0.0	0.0	chr1	163363406	163363435	(85592987)	+	(GA)n	Simple_repeat	1	30	(0)	240649
2001	21.6	3.7	8.0	chr1	163363436	163363638	(85592784)	C	MLT1F1	LTR/ERVL-MaLR	(375)	194	1	240648
22	0.0	0.0	0.0	chr1	164707395	164707418	(84249004)	+	(GT)n	Simple_repeat	1	24	(0)	242522
44	0.0	0.0	0.0	chr1	164707419	164707456	(84248966)	+	(GA)n	Simple_repeat	1	38	(0)	242523
29	0.0	0.0	0.0	chr1	166084206	166084237	(82872185)	+	(CA)n	Simple_repeat	1	32	(0)	244786
44	2.4	0.0	0.0	chr1	166084238	166084279	(82872143)	+	(CT)n	Simple_repeat	1	42	(0)	244787
210	27.3	2.5	6.1	chr1	166084395	166084476	(82871946)	+	MIR3	SINE/MIR	119	197	(11)	244788
890	27.8	8.9	4.0	chr1	166489343	166489960	(82466462)	C	L2a	LINE/L2	(1)	3425	2762	245349
282	36.4	9.0	2.2	chr1	167526915	167527234	(81429188)	+	L2c	LINE/L2	3021	3364	(23)	246833
32	5.3	0.0	0.0	chr1	167527237	167527276	(81429146)	+	(GA)n	Simple_repeat	1	40	(0)	246834
26	24.4	1.2	3.5	chr1	167620965	167620992	(81335430)	+	(TC)n	Simple_repeat	1	28	(0)	247002
46	2.3	0.0	0.0	chr1	167620993	167621036	(81335386)	+	(TG)n	Simple_repeat	1	44	(0)	247003
26	24.4	1.2	3.5	chr1	167621037	167621091	(81335331)	+	(TC)n	Simple_repeat	1	53	(0)	247004
2038	10.3	1.1	1.1	chr1	167627370	167627651	(81328771)	C	AluSg	SINE/Alu	(15)	295	14	247023
943	29.2	9.0	6.6	chr1	167658731	167659280	(81297142)	C	L1ME3G	LINE/L1	(345)	579	15	247083
879	29.0	9.1	1.6	chr1	167821282	167821656	(81134766)	+	LTR79	LTR/ERVL	6	411	(116)	247369
4884	13.3	5.2	5.4	chr1	167863573	167864915	(81091507)	+	Harlequin-int	LTR/ERV1	1	1349	(5547)	247451
2059	13.1	10.4	3.6	chr1	168224201	168224477	(80731945)	C	L1MB8	LINE/L1	(1)	6177	5886	248043
3209	10.8	1.9	0.2	chr1	168224478	168224941	(80731481)	+	MER4A1	LTR/ERV1	1	472	(0)	248044
20	7.8	0.0	0.0	chr1	168586084	168586110	(80370312)	+	(TC)n	Simple_repeat	1	27	(0)	248606
661	25.8	8.3	4.6	chr1	168586136	168586354	(80370068)	+	MIR	SINE/MIR	35	262	(0)	248607
15	18.1	0.0	3.0	chr1	170531952	170531984	(78424438)	+	GA-rich	Low_complexity	1	33	(0)	251433
27	0.0	0.0	0.0	chr1	170554612	170554641	(78401781)	+	(GT)n	Simple_repeat	1	30	(0)	251468
41	4.8	0.0	0.0	chr1	170554642	170554685	(78401737)	+	(GA)n	Simple_repeat	1	44	(0)	251469
66	1.7	0.0	0.0	chr1	170689815	170689875	(78266547)	+	(TC)n	Simple_repeat	1	61	(0)	251640
27	6.0	0.0	0.0	chr1	170689876	170689910	(78266512)	+	(GT)n	Simple_repeat	1	35	(0)	251641
1867	17.9	8.1	0.6	chr1	171610397	171610762	(77345660)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	253010
858	27.2	1.2	3.0	chr1	171610763	171610889	(77345533)	C	ERV3-16A3_I-int	LTR/ERVL	(906)	4320	4193	253007
502	34.5	7.7	5.9	chr1	172478478	172478874	(76477548)	C	L2c	LINE/L2	(0)	3387	2982	254266
2656	18.8	13.2	0.8	chr1	172777776	172778363	(76178059)	+	MER76	LTR/ERVL	1	659	(32)	254698
50	0.0	0.0	0.0	chr1	172778364	172778406	(76178016)	+	(CT)n	Simple_repeat	1	43	(0)	254699
2656	18.8	13.2	0.8	chr1	172778407	172778422	(76178000)	+	MER76	LTR/ERVL	660	690	(1)	254698
551	25.5	8.4	0.7	chr1	172778424	172778577	(76177845)	+	MIRb	SINE/MIR	66	232	(36)	254700
1532	30.7	4.7	2.6	chr1	172894898	172895579	(76060843)	+	Tigger10	DNA/TcMar-Tigger	40	736	(1108)	254844
2212	8.1	2.7	1.4	chr1	172933528	172933822	(76022600)	+	AluY	SINE/Alu	1	299	(12)	254892
34	5.1	0.0	2.3	chr1	172947212	172947254	(76009168)	+	(CT)n	Simple_repeat	1	43	(0)	254918
2223	16.2	3.4	1.7	chr1	172978396	172978739	(75977683)	+	MLT2D	LTR/ERVL	1	355	(59)	254963
38	8.2	3.0	1.4	chr1	172978740	172978806	(75977616)	+	(TC)n	Simple_repeat	1	69	(0)	254964
2223	16.2	3.4	1.7	chr1	172978807	172978868	(75977554)	+	MLT2D	LTR/ERVL	356	413	(1)	254963
1390	23.2	5.4	5.6	chr1	173307955	173308285	(75648137)	C	L1ME4a	LINE/L1	(883)	5590	5269	255410
47	2.3	0.0	0.0	chr1	173308286	173308330	(75648092)	+	(TG)n	Simple_repeat	1	45	(0)	255417
1390	23.1	5.5	5.8	chr1	173308331	173308528	(75647894)	C	L1ME4a	LINE/L1	(1051)	5268	5063	255410
294	14.2	1.7	1.1	chr1	173550777	173550868	(75405554)	+	AluY	SINE/Alu	66	233	(69)	255751
43	0.0	0.0	0.0	chr1	173550873	173550909	(75405513)	+	(AG)n	Simple_repeat	1	37	(0)	255752
24	11.2	0.0	0.0	chr1	173550911	173550950	(75405472)	+	(GGGAG)n	Simple_repeat	1	40	(0)	255753
2262	11.3	0.7	0.3	chr1	173608308	173608616	(75347806)	C	AluSx	SINE/Alu	(2)	310	1	255848
1062	20.9	11.8	4.3	chr1	173608617	173608750	(75347672)	+	AluJr	SINE/Alu	123	280	(32)	255847
27768	6.8	1.9	1.4	chr1	173684303	173688508	(75267914)	C	HERVIP10FH-int	LTR/ERV1	(0)	5102	864	255944
52	22.3	0.0	0.0	chr1	173688514	173688620	(75267802)	+	(CT)n	Simple_repeat	1	107	(0)	255945
236	31.6	10.1	8.0	chr1	174114765	174114977	(74841445)	+	MLT1N2	LTR/ERVL-MaLR	3	220	(342)	256737
15	26.5	2.4	0.0	chr1	174114989	174115030	(74841392)	+	(CT)n	Simple_repeat	1	43	(0)	256738
1907	15.0	10.8	3.5	chr1	174204636	174205029	(74751393)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	256903
51	0.0	0.0	0.0	chr1	174280049	174280092	(74676330)	+	(GA)n	Simple_repeat	1	44	(0)	257009
2016	12.8	0.4	0.0	chr1	174681999	174682271	(74274151)	+	AluSq2	SINE/Alu	1	274	(39)	257518
30	0.0	0.0	0.0	chr1	174682272	174682297	(74274125)	+	(CT)n	Simple_repeat	1	26	(0)	257519
24	18.7	1.9	1.9	chr1	174682300	174682352	(74274070)	+	(AC)n	Simple_repeat	1	54	(0)	257520
566	21.2	5.6	8.6	chr1	174682392	174682577	(74273845)	+	MER58C	DNA/hAT-Charlie	35	214	(1)	257521
16	12.6	2.7	2.6	chr1	174866073	174866110	(74090312)	+	GA-rich	Low_complexity	1	38	(0)	257806
63	0.0	0.0	0.0	chr1	174866111	174866164	(74090258)	+	(GA)n	Simple_repeat	1	54	(0)	257807
2162	19.7	9.2	7.5	chr1	175312172	175312621	(73643801)	+	MLT2B1	LTR/ERVL	1	472	(48)	258511
53	0.0	0.0	0.0	chr1	175312622	175312666	(73643756)	+	(CA)n	Simple_repeat	1	45	(0)	258512
2162	19.7	9.2	7.5	chr1	175312667	175312725	(73643697)	+	MLT2B1	LTR/ERVL	473	520	(0)	258511
15	5.5	0.0	0.0	chr1	175312773	175312791	(73643631)	+	(AG)n	Simple_repeat	1	19	(0)	258513
54	0.0	0.0	0.0	chr1	175743630	175743675	(73212747)	+	(TC)n	Simple_repeat	1	46	(0)	259141
51	0.0	0.0	0.0	chr1	176779477	176779520	(72176902)	+	(CA)n	Simple_repeat	1	44	(0)	260690
19	0.0	4.2	0.0	chr1	176779521	176779544	(72176878)	+	(GA)n	Simple_repeat	1	25	(0)	260691
642	33.3	5.6	0.0	chr1	176779590	176779826	(72176596)	C	MIRb	SINE/MIR	(10)	258	8	260692
13	19.5	0.0	2.7	chr1	178726029	178726065	(70230357)	+	G-rich	Low_complexity	1	37	(0)	263569
14	23.1	1.9	3.6	chr1	180229384	180229437	(68726985)	+	G-rich	Low_complexity	1	55	(0)	266081
21	16.0	1.6	6.2	chr1	180229723	180229785	(68726637)	+	(GCCCC)n	Simple_repeat	1	64	(0)	266082
15	17.7	0.0	0.0	chr1	180605831	180605862	(68350560)	+	(TCAT)n	Simple_repeat	1	32	(0)	266662
15	5.6	0.0	0.0	chr1	180605923	180605941	(68350481)	+	(TC)n	Simple_repeat	1	19	(0)	266663
13	17.1	3.0	0.0	chr1	180605942	180605955	(68350467)	+	(TCTTTC)n	Simple_repeat	1	34	(0)	266664
109	0.0	6.0	0.0	chr1	181023029	181023145	(67933277)	+	(TC)n	Simple_repeat	1	124	(0)	267309
1210	29.5	5.1	3.4	chr1	181035908	181036408	(67920014)	+	LTR33	LTR/ERVL	2	511	(4)	267344
3896	12.8	4.1	0.7	chr1	181173937	181174423	(67781999)	+	MER41B	LTR/ERV1	1	509	(125)	267598
927	27.0	12.0	3.5	chr1	181391315	181391717	(67564705)	C	LTR33A	LTR/ERVL	(0)	520	79	267911
42	19.5	2.1	0.0	chr1	181391881	181391980	(67564442)	+	(TCTCTG)n	Simple_repeat	1	102	(0)	267912
1576	17.8	5.4	2.8	chr1	181470199	181470388	(67486034)	C	AluJr	SINE/Alu	(18)	294	109	268039
1143	23.1	7.6	11.9	chr1	182186662	182187049	(66769373)	C	MLT1A	LTR/ERVL-MaLR	(4)	370	1	268977
60	0.0	0.0	0.0	chr1	182289912	182289962	(66666460)	+	(AC)n	Simple_repeat	1	51	(0)	269174
17	0.0	0.0	0.0	chr1	182290064	182290082	(66666340)	+	(TC)n	Simple_repeat	1	19	(0)	269175
2409	9.6	2.8	3.8	chr1	182292297	182292664	(66663758)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	269177
12	12.2	3.7	0.0	chr1	182391717	182391743	(66564679)	+	GA-rich	Low_complexity	1	28	(0)	269390
1628	19.8	2.2	1.9	chr1	182639669	182640028	(66316394)	+	MLT1A0	LTR/ERVL-MaLR	5	365	(0)	269798
16	4.5	4.3	0.0	chr1	182640075	182640097	(66316325)	+	(TC)n	Simple_repeat	1	24	(0)	269799
1185	28.6	13.0	3.6	chr1	182640236	182641104	(66315318)	+	LTR78	LTR/ERV1	52	1014	(290)	269800
246	30.7	2.5	8.3	chr1	182688196	182688327	(66268095)	+	L2c	LINE/L2	3202	3355	(32)	269873
29	6.2	0.0	0.0	chr1	182688345	182688378	(66268044)	+	(TC)n	Simple_repeat	1	34	(0)	269874
1978	23.9	8.2	2.2	chr1	182688480	182689056	(66267366)	+	MLT1E2	LTR/ERVL-MaLR	14	627	(0)	269875
257	31.5	14.0	5.4	chr1	183458680	183458759	(65497663)	+	L2b	LINE/L2	2109	2191	(1228)	271160
1966	14.2	1.0	1.4	chr1	183458760	183458922	(65497500)	C	AluJo	SINE/Alu	(16)	296	135	271161
2338	9.5	0.0	1.3	chr1	183458923	183459228	(65497194)	C	AluSx	SINE/Alu	(10)	302	1	271162
18	23.6	4.7	3.0	chr1	183590552	183590615	(65365807)	+	GA-rich	Low_complexity	1	67	(0)	271381
261	30.4	6.7	6.0	chr1	183590714	183590775	(65365647)	+	MIR3	SINE/MIR	54	117	(91)	271382
1530	21.0	3.4	6.1	chr1	184095425	184095612	(64860810)	+	MLT1B	LTR/ERVL-MaLR	3	189	(201)	272093
51	7.5	1.4	0.0	chr1	184095613	184095682	(64860740)	+	(TC)n	Simple_repeat	1	71	(0)	272094
1530	21.0	3.4	6.1	chr1	184095683	184095888	(64860534)	+	MLT1B	LTR/ERVL-MaLR	190	386	(4)	272093
1410	27.6	5.2	7.1	chr1	184160371	184160917	(64795505)	C	MLT1H	LTR/ERVL-MaLR	(13)	536	1	272195
1197	23.3	10.4	2.2	chr1	184786692	184786897	(64169525)	+	MLT1H	LTR/ERVL-MaLR	1	234	(315)	273227
46	0.0	0.0	0.0	chr1	184786898	184786936	(64169486)	+	(TC)n	Simple_repeat	1	39	(0)	273228
1197	23.3	10.4	2.2	chr1	184786937	184787053	(64169369)	+	MLT1H	LTR/ERVL-MaLR	235	354	(195)	273227
180	21.7	2.1	4.2	chr1	184797700	184797747	(64158675)	C	L3b	LINE/CR1	(245)	4987	4941	273249
288	30.6	2.0	3.3	chr1	184797766	184797917	(64158505)	+	MIRb	SINE/MIR	109	258	(10)	273250
14	27.1	0.0	2.1	chr1	184797920	184797966	(64158456)	+	(TCCC)n	Simple_repeat	1	47	(0)	273251
25	11.8	0.0	0.0	chr1	184967182	184967219	(63989203)	+	(TC)n	Simple_repeat	1	38	(0)	273516
29	0.0	0.0	0.0	chr1	184967220	184967244	(63989178)	+	(TG)n	Simple_repeat	1	25	(0)	273517
1889	20.2	10.7	6.0	chr1	185660004	185660306	(63296116)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	257	274589
48	0.0	0.0	0.0	chr1	185660307	185660347	(63296075)	+	(GT)n	Simple_repeat	1	41	(0)	274590
1889	20.2	10.7	6.0	chr1	185660348	185660575	(63295847)	C	MLT1F2	LTR/ERVL-MaLR	(304)	256	2	274589
3723	11.9	2.0	5.7	chr1	186223611	186224240	(62732182)	+	MER41-int	LTR/ERV1	1	606	(5340)	275298
45	2.4	0.0	0.0	chr1	186224241	186224283	(62732139)	+	(CT)n	Simple_repeat	1	43	(0)	275299
11455	16.6	7.7	5.5	chr1	186224285	186227756	(62728666)	+	MER41-int	LTR/ERV1	2765	5944	(2)	275298
50	4.0	0.0	0.0	chr1	190478703	190478754	(58477668)	+	(TC)n	Simple_repeat	1	52	(0)	280953
28	0.0	0.0	0.0	chr1	191823364	191823394	(57133028)	+	(GT)n	Simple_repeat	1	31	(0)	282612
35	6.9	0.0	0.0	chr1	191823394	191823439	(57132983)	+	(GA)n	Simple_repeat	1	46	(0)	282613
6214	29.0	8.4	3.7	chr1	192985411	192986727	(55969695)	C	L2a	LINE/L2	(1)	3425	2095	284178
59	1.8	0.0	0.0	chr1	193007843	193007897	(55948525)	+	(AG)n	Simple_repeat	1	55	(0)	284204
6336	17.5	4.2	2.3	chr1	193115476	193116605	(55839817)	+	L1MCa	LINE/L1	23	1178	(5330)	284386
1677	21.4	0.0	0.0	chr1	193117537	193117817	(55838605)	+	AluJr	SINE/Alu	2	282	(30)	284390
1363	12.0	1.8	7.6	chr1	193117818	193117836	(55838586)	+	L1MCa	LINE/L1	2216	2216	(4292)	284386
32	3.2	0.0	0.0	chr1	193117837	193117868	(55838554)	+	(CA)n	Simple_repeat	1	32	(0)	284391
7562	14.0	2.9	0.6	chr1	193117869	193119289	(55837133)	+	L1MCa	LINE/L1	2216	3672	(2649)	284386
17	0.0	0.0	0.0	chr1	193308632	193308650	(55647772)	+	(TG)n	Simple_repeat	1	19	(0)	284678
413	30.0	12.8	2.2	chr1	193308651	193308964	(55647458)	C	L2a	LINE/L2	(123)	3303	2952	284679
1830	13.6	15.9	0.0	chr1	194865980	194866158	(54090264)	+	MSTA	LTR/ERVL-MaLR	1	208	(220)	286693
31	5.8	0.0	0.0	chr1	194866159	194866194	(54090228)	+	(TC)n	Simple_repeat	1	36	(0)	286694
1830	13.6	15.9	0.0	chr1	194866195	194866374	(54090048)	+	MSTA	LTR/ERVL-MaLR	209	427	(1)	286693
1923	15.2	0.0	0.4	chr1	196379289	196379564	(52576858)	+	AluSx	SINE/Alu	1	275	(37)	288576
50	0.0	0.0	0.0	chr1	196379566	196379608	(52576814)	+	(TC)n	Simple_repeat	1	43	(0)	288577
1415	21.6	2.3	13.7	chr1	197008877	197009322	(51947100)	C	MSTD	LTR/ERVL-MaLR	(0)	396	3	289356
870	39.3	4.5	4.1	chr1	197021387	197021743	(51934679)	+	L2	LINE/L2	337	685	(2734)	289373
1958	14.0	4.2	3.7	chr1	197021744	197022122	(51934300)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	289375
16	9.3	0.0	0.0	chr1	197933736	197933758	(51022664)	+	(A)n	Simple_repeat	1	23	(0)	290536
1515	25.2	5.6	3.8	chr1	198018481	198018951	(50937471)	+	MLT1G	LTR/ERVL-MaLR	37	516	(75)	290661
1440	31.2	14.6	0.7	chr1	198519228	198519984	(50436438)	+	L2	LINE/L2	1228	2108	(1311)	291311
611	22.8	12.7	7.2	chr1	198519997	198520218	(50436204)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	314	291312
18	0.0	4.3	0.0	chr1	199929746	199929768	(49026654)	+	(TC)n	Simple_repeat	1	24	(0)	293252
228	23.6	6.8	0.0	chr1	200226652	200226706	(48729716)	C	MIR3	SINE/MIR	(22)	186	128	293825
65	3.8	1.2	0.0	chr1	200276767	200276847	(48679575)	+	(GA)n	Simple_repeat	1	82	(0)	293913
623	31.9	3.4	3.0	chr1	200276882	200277143	(48679279)	C	L1MC4a	LINE/L1	(1988)	5894	5632	293914
19	7.3	0.0	0.0	chr1	200669893	200669921	(48286501)	+	(GGAGC)n	Simple_repeat	1	29	(0)	294760
14	10.0	2.8	5.4	chr1	200670033	200670068	(48286354)	+	G-rich	Low_complexity	1	37	(0)	294761
1227	5.1	0.0	0.0	chr1	200886489	200886626	(48069796)	C	AluSx	SINE/Alu	(174)	138	1	295163
2551	13.1	11.8	0.7	chr1	200886694	200887146	(48069276)	+	LTR54	LTR/ERV1	1	510	(0)	295164
42	0.0	0.0	0.0	chr1	201435916	201435951	(47520471)	+	(TG)n	Simple_repeat	1	36	(0)	296005
20	16.3	0.0	0.0	chr1	201435953	201435987	(47520435)	+	GA-rich	Low_complexity	1	35	(0)	296006
982	24.4	20.3	1.9	chr1	201582215	201582645	(47373777)	C	LTR33A_	LTR/ERVL	(0)	531	1	296307
45	2.4	0.0	0.0	chr1	201617199	201617241	(47339181)	+	(TC)n	Simple_repeat	1	43	(0)	296374
25	6.3	0.0	0.0	chr1	201617248	201617280	(47339142)	+	(CA)n	Simple_repeat	1	33	(0)	296375
900	20.1	0.6	2.8	chr1	201627080	201627258	(47329164)	C	AluJr4	SINE/Alu	(1)	311	137	296390
2257	11.1	0.0	1.6	chr1	201627268	201627574	(47328848)	C	AluSz	SINE/Alu	(7)	305	4	296391
1787	11.9	0.7	1.4	chr1	201702355	201702631	(47253791)	C	AluSq2	SINE/Alu	(1)	312	38	296504
4220	16.0	1.8	1.6	chr1	201702632	201702672	(47253750)	+	L1MB7	LINE/L1	6123	6154	(30)	296503
70	0.0	0.0	0.0	chr1	201702673	201702732	(47253690)	+	(TC)n	Simple_repeat	1	60	(0)	296505
918	24.6	1.4	0.9	chr1	201702745	201702967	(47253455)	+	MIR	SINE/MIR	17	229	(33)	296506
1826	19.1	0.0	1.6	chr1	201923582	201923883	(47032539)	+	AluJb	SINE/Alu	2	299	(13)	296846
47	4.3	0.0	0.0	chr1	201923884	201923932	(47032490)	+	(AG)n	Simple_repeat	1	49	(0)	296847
1826	19.1	0.0	1.6	chr1	201923933	201923943	(47032479)	+	AluJb	SINE/Alu	300	310	(2)	296846
180	16.1	2.2	1.1	chr1	201923947	201924034	(47032388)	+	GA-rich	Low_complexity	1	93	(0)	296848
2426	6.5	0.0	2.6	chr1	201924035	201924342	(47032080)	+	AluYk3	SINE/Alu	1	300	(11)	296849
12	20.3	6.7	0.0	chr1	201947123	201947167	(47009255)	+	(AGATAG)n	Simple_repeat	1	48	(0)	296897
53	2.0	0.0	0.0	chr1	201947176	201947225	(47009197)	+	(GA)n	Simple_repeat	1	50	(0)	296898
491	26.2	11.3	0.0	chr1	202018807	202018955	(46937467)	+	L2b	LINE/L2	3201	3368	(7)	297044
2785	21.4	4.5	8.3	chr1	202500001	202500166	(46456256)	+	L1MA5	LINE/L1	5523	5682	(622)	298024
274	7.7	0.0	0.0	chr1	202500167	202500205	(46456217)	+	tRNA-Glu-GAG	tRNA	2	40	(35)	298025
41	5.7	1.8	1.7	chr1	202500206	202500262	(46456160)	+	(TC)n	Simple_repeat	1	58	(0)	298026
3594	14.4	4.2	0.1	chr1	202500263	202500865	(46455557)	+	L1MA5	LINE/L1	5673	6296	(4)	298024
16	21.7	0.0	2.6	chr1	203076320	203076358	(45880064)	+	(CT)n	Simple_repeat	1	39	(0)	299018
46	12.3	0.0	0.0	chr1	203306796	203306875	(45649547)	+	(AC)n	Simple_repeat	1	80	(0)	299386
21	22.3	3.8	0.0	chr1	203514255	203514307	(45442115)	+	(CT)n	Simple_repeat	1	55	(0)	299740
1863	12.6	0.0	8.4	chr1	203544824	203545156	(45411266)	C	AluJb	SINE/Alu	(7)	305	1	299798
314	19.2	21.1	2.0	chr1	203723393	203723420	(45233002)	C	AluSx3	SINE/Alu	(12)	299	273	300174
62	1.6	1.5	1.5	chr1	203723421	203723485	(45232937)	+	(TC)n	Simple_repeat	1	66	(0)	300175
314	19.2	21.1	2.0	chr1	203723486	203723555	(45232867)	C	AluSx3	SINE/Alu	(39)	272	177	300174
1824	18.0	5.8	0.3	chr1	204063746	204064090	(44892332)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	300905
29	5.6	0.0	0.0	chr1	204064120	204064156	(44892266)	+	(TC)n	Simple_repeat	1	37	(0)	300906
34	0.0	0.0	0.0	chr1	204064157	204064185	(44892237)	+	(CA)n	Simple_repeat	1	29	(0)	300907
541	14.6	15.6	0.0	chr1	204064237	204064339	(44892083)	+	MER45A	DNA/hAT-Tip100	1	122	(56)	300908
44	4.4	0.0	0.0	chr1	204222021	204222067	(44734355)	+	(TC)n	Simple_repeat	1	47	(0)	301203
696	19.4	4.0	0.0	chr1	204506878	204507021	(44449401)	+	L1MA8	LINE/L1	6142	6291	(0)	301658
661	2.7	0.0	0.0	chr1	204507028	204507102	(44449320)	C	tRNA-Lys-AAA	tRNA	(1)	75	1	301659
2124	7.6	7.1	0.3	chr1	204515678	204515965	(44440457)	C	AluSq2	SINE/Alu	(2)	311	3	301691
380	27.2	6.5	11.4	chr1	204515966	204516016	(44440406)	C	L3	LINE/CR1	(391)	3708	3665	301689
2282	8.9	0.3	1.0	chr1	204516958	204517261	(44439161)	+	AluSx	SINE/Alu	1	302	(10)	301692
301	26.7	12.5	1.9	chr1	204660349	204660455	(44295967)	+	L2b	LINE/L2	3244	3363	(12)	302020
22	15.8	3.8	1.8	chr1	204660520	204660546	(44295876)	+	(CT)n	Simple_repeat	1	28	(0)	302021
34	3.0	0.0	0.0	chr1	204660547	204660580	(44295842)	+	(AC)n	Simple_repeat	1	34	(0)	302022
22	15.8	3.8	1.8	chr1	204660581	204660605	(44295817)	+	(CT)n	Simple_repeat	1	25	(0)	302023
484	20.4	0.0	0.0	chr1	204707341	204707428	(44248994)	C	5S	rRNA	(31)	90	3	302103
18	4.8	0.0	0.0	chr1	204707431	204707452	(44248970)	+	(TC)n	Simple_repeat	1	22	(0)	302104
15	4.0	7.1	3.3	chr1	204733393	204733420	(44223002)	+	(CT)n	Simple_repeat	1	30	(0)	302160
41	2.4	0.0	2.3	chr1	204733424	204733467	(44222955)	+	(CA)n	Simple_repeat	1	44	(0)	302161
17	8.8	0.0	0.0	chr1	205319405	205319428	(43636994)	+	(TC)n	Simple_repeat	1	24	(0)	303207
12	9.9	2.6	7.7	chr1	205454430	205454467	(43501955)	+	G-rich	Low_complexity	1	39	(0)	303458
24	3.5	0.0	0.0	chr1	205454522	205454550	(43501872)	+	(GT)n	Simple_repeat	1	29	(0)	303459
16	0.0	0.0	0.0	chr1	205454550	205454567	(43501855)	+	(GA)n	Simple_repeat	1	18	(0)	303460
25	26.0	3.9	0.0	chr1	205455936	205456013	(43500409)	+	(CT)n	Simple_repeat	1	81	(0)	303461
574	28.5	3.8	0.0	chr1	205496098	205496276	(43460146)	C	MIR	SINE/MIR	(0)	262	77	303551
72	1.5	0.0	0.0	chr1	205496328	205496393	(43460029)	+	(TC)n	Simple_repeat	1	66	(0)	303552
1933	14.3	0.0	0.4	chr1	205496394	205496673	(43459749)	C	AluSz	SINE/Alu	(32)	280	2	303553
34	6.9	2.2	0.0	chr1	206419202	206419247	(42537175)	+	(TC)n	Simple_repeat	1	47	(0)	305083
18	25.9	0.0	3.7	chr1	206470413	206470466	(42485956)	+	GA-rich	Low_complexity	1	54	(0)	305145
18	23.3	5.4	4.1	chr1	206501248	206501340	(42455082)	+	(GAGAGAT)n	Simple_repeat	1	98	(0)	305196
61	1.7	1.7	0.0	chr1	206535685	206535744	(42420678)	+	(GT)n	Simple_repeat	1	61	(0)	305253
17	18.2	0.0	0.0	chr1	206535745	206535775	(42420647)	+	GA-rich	Low_complexity	1	31	(0)	305254
2307	18.2	3.3	0.2	chr1	206548186	206548598	(42407824)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	305282
4462	18.9	8.2	10.2	chr1	206548599	206548859	(42407563)	C	L1MEc	LINE/L1	(4950)	1450	1174	305274
446	29.2	9.1	5.8	chr1	206593124	206593338	(42363084)	+	MIRb	SINE/MIR	29	258	(4)	305362
45	2.4	0.0	0.0	chr1	206593467	206593509	(42362913)	+	(GA)n	Simple_repeat	1	43	(0)	305364
30	0.0	0.0	0.0	chr1	206593510	206593542	(42362880)	+	(TG)n	Simple_repeat	1	33	(0)	305365
1827	11.4	8.7	0.0	chr1	206650296	206650559	(42305863)	+	AluJb	SINE/Alu	12	300	(12)	305465
40	13.4	0.0	0.0	chr1	206954890	206954956	(42001466)	+	(AGAG)n	Simple_repeat	1	67	(0)	305978
521	27.6	2.5	5.2	chr1	206955074	206955263	(42001159)	+	MIRb	SINE/MIR	65	259	(9)	305979
16	4.5	4.3	0.0	chr1	206982798	206982820	(41973602)	+	(TG)n	Simple_repeat	1	24	(0)	306023
17	24.5	2.3	0.0	chr1	207010312	207010355	(41946067)	+	(CT)n	Simple_repeat	1	45	(0)	306075
1736	29.3	11.0	0.5	chr1	207362507	207363150	(41593272)	C	L2	LINE/L2	(1750)	1669	950	306526
1083	30.2	4.5	2.6	chr1	207363181	207363598	(41592824)	+	MLT1J1	LTR/ERVL-MaLR	18	443	(1)	306527
2063	15.5	8.0	1.0	chr1	207524872	207525268	(41431154)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	306777
92	13.9	3.5	0.0	chr1	207682961	207683131	(41273291)	+	(TTTC)n	Simple_repeat	1	177	(0)	307012
1794	16.8	0.7	0.7	chr1	207683157	207683436	(41272986)	C	AluJo	SINE/Alu	(32)	280	1	307013
259	31.6	0.8	8.6	chr1	208021672	208021799	(40934623)	+	L2c	LINE/L2	3257	3374	(13)	307492
70	0.0	0.0	0.0	chr1	208022028	208022087	(40934335)	+	(GT)n	Simple_repeat	1	60	(0)	307493
16	0.0	0.0	0.0	chr1	208086790	208086807	(40869615)	+	(A)n	Simple_repeat	1	18	(0)	307577
40	4.8	0.0	0.0	chr1	208086938	208086980	(40869442)	+	(TC)n	Simple_repeat	1	43	(0)	307578
44	9.7	0.0	0.0	chr1	208086991	208087056	(40869366)	+	(GAGA)n	Simple_repeat	1	66	(0)	307579
15	27.6	6.5	0.0	chr1	208087239	208087300	(40869122)	+	(TA)n	Simple_repeat	1	66	(0)	307580
27	15.8	2.0	0.0	chr1	208098409	208098458	(40857964)	+	(TC)n	Simple_repeat	1	51	(0)	307596
40	0.0	0.0	0.0	chr1	208098459	208098492	(40857930)	+	(CA)n	Simple_repeat	1	34	(0)	307597
198	25.3	5.1	2.6	chr1	208098513	208098589	(40857833)	C	Tigger19a	DNA/TcMar-Tigger	(30)	293	215	307598
473	29.7	14.3	2.5	chr1	208214736	208214932	(40741490)	C	MIRb	SINE/MIR	(38)	230	7	307789
20	15.9	0.0	0.0	chr1	208214935	208214969	(40741453)	+	(CT)n	Simple_repeat	1	35	(0)	307790
385	32.6	2.2	4.3	chr1	208214970	208215018	(40741404)	+	L2b	LINE/L2	3240	3288	(87)	307791
1824	15.5	5.8	0.0	chr1	208215019	208215295	(40741127)	C	AluJb	SINE/Alu	(18)	294	1	307792
57	1.8	1.8	0.0	chr1	209634918	209634974	(39321448)	+	(TC)n	Simple_repeat	1	58	(0)	309960
46	2.3	0.0	0.0	chr1	209674668	209674711	(39281711)	+	(TC)n	Simple_repeat	1	44	(0)	310026
25	0.0	0.0	0.0	chr1	209674712	209674739	(39281683)	+	(AC)n	Simple_repeat	1	28	(0)	310027
2169	14.6	0.7	0.0	chr1	210916866	210917174	(38039248)	+	AluSx	SINE/Alu	1	311	(1)	311875
93	20.2	1.0	0.0	chr1	210917175	210917366	(38039056)	+	GA-rich	Low_complexity	1	194	(0)	311876
18	7.6	0.0	0.0	chr1	210917477	210917505	(38038917)	+	(AAAC)n	Simple_repeat	1	29	(0)	311877
33	2.6	0.0	0.0	chr1	211113936	211113974	(37842448)	+	(TC)n	Simple_repeat	1	39	(0)	312116
46	2.3	0.0	0.0	chr1	211113975	211114018	(37842404)	+	(CA)n	Simple_repeat	1	44	(0)	312117
491	25.0	12.6	7.5	chr1	211114119	211114491	(37841931)	+	LTR81A	LTR/Gypsy	735	1293	(57)	312118
25	19.3	0.0	0.0	chr1	211259429	211259481	(37696941)	+	(CCT)n	Simple_repeat	1	53	(0)	312389
15	18.4	2.1	4.2	chr1	211259610	211259656	(37696766)	+	(CGGCAG)n	Simple_repeat	1	48	(0)	312390
14	4.8	0.0	4.2	chr1	211259634	211259657	(37696765)	+	(CGG)n	Simple_repeat	1	24	(0)	312391
1907	13.2	2.0	0.3	chr1	211536986	211537280	(37419142)	C	AluSq	SINE/Alu	(13)	300	1	312894
2269	12.1	0.3	0.6	chr1	212146674	212146986	(36809436)	C	AluSx1	SINE/Alu	(0)	312	1	313983
16	0.0	0.0	0.0	chr1	212147019	212147036	(36809386)	+	(TC)n	Simple_repeat	1	18	(0)	313984
17	0.0	0.0	0.0	chr1	212147036	212147054	(36809368)	+	(CA)n	Simple_repeat	1	19	(0)	313985
702	19.9	10.6	4.7	chr1	212147105	212147362	(36809060)	+	ORSL	DNA/hAT-Tip100	1	275	(0)	313986
2383	9.4	0.0	0.0	chr1	212151666	212151964	(36804458)	+	AluSq2	SINE/Alu	1	299	(14)	313997
378	20.8	3.6	12.6	chr1	212151978	212152159	(36804263)	C	Charlie18a	DNA/hAT-Charlie	(108)	234	70	313998
184	31.2	6.8	7.2	chr1	212535102	212535322	(36421100)	+	L2	LINE/L2	2385	2604	(815)	314700
194	25.5	0.0	0.0	chr1	212535342	212535388	(36421034)	C	L2c	LINE/L2	(10)	3377	3331	314701
54	9.5	1.3	0.0	chr1	212535410	212535488	(36420934)	+	(AG)n	Simple_repeat	1	80	(0)	314702
212	29.3	3.5	2.4	chr1	212535489	212535572	(36420850)	C	L2c	LINE/L2	(70)	3317	3233	314701
1563	14.4	7.4	3.2	chr1	212639371	212639655	(36316767)	+	AluJb	SINE/Alu	1	298	(14)	314890
82	19.8	2.6	0.6	chr1	212639656	212639854	(36316568)	+	GA-rich	Low_complexity	1	203	(0)	314891
21	7.7	0.0	0.0	chr1	212916229	212916256	(36040166)	+	(CT)n	Simple_repeat	1	28	(0)	315423
31	0.0	0.0	0.0	chr1	212916257	212916283	(36040139)	+	(CA)n	Simple_repeat	1	27	(0)	315424
29	0.0	0.0	0.0	chr1	212987032	212987056	(35969366)	+	(AG)n	Simple_repeat	1	25	(0)	315542
49	2.2	0.0	0.0	chr1	213988411	213988456	(34967966)	+	(AG)n	Simple_repeat	1	46	(0)	317041
43	0.0	0.0	0.0	chr1	219170347	219170383	(29786039)	+	(TG)n	Simple_repeat	1	37	(0)	324245
55	0.0	0.0	0.0	chr1	219419549	219419595	(29536827)	+	(AC)n	Simple_repeat	1	47	(0)	324579
16	0.0	0.0	0.0	chr1	219419596	219419613	(29536809)	+	(GA)n	Simple_repeat	1	18	(0)	324580
246	38.8	4.5	3.6	chr1	219419747	219419968	(29536454)	C	MamGyp-int	LTR/Gypsy	(3700)	1403	1180	324581
2203	18.1	0.5	2.0	chr1	219716662	219717061	(29239361)	+	MSTD	LTR/ERVL-MaLR	2	395	(1)	325030
317	33.2	8.6	7.0	chr1	219901892	219902189	(29054233)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	210	325295
1695	25.1	6.0	4.6	chr1	220431829	220432371	(28524051)	+	MLT1F2	LTR/ERVL-MaLR	10	560	(0)	326210
8319	5.6	1.8	2.2	chr1	220718883	220719959	(28236463)	+	Harlequin-int	LTR/ERV1	263	1334	(5562)	326639
34	0.0	0.0	0.0	chr1	220875183	220875207	(28081215)	+	(AG)n	Simple_repeat	1	25	(0)	326855
34	0.0	0.0	0.0	chr1	220875208	220875236	(28081186)	+	(GT)n	Simple_repeat	1	29	(0)	326856
34	0.0	0.0	0.0	chr1	220875237	220875250	(28081172)	+	(AG)n	Simple_repeat	2	15	(0)	326857
13	21.5	4.0	1.9	chr1	220879536	220879585	(28076837)	+	(CCGGCTC)n	Simple_repeat	1	52	(0)	326859
21	0.0	0.0	0.0	chr1	221055973	221055995	(27900427)	+	(TG)n	Simple_repeat	1	23	(0)	327092
49	4.1	0.0	0.0	chr1	221055996	221056046	(27900376)	+	(GA)n	Simple_repeat	1	51	(0)	327093
35	22.1	0.0	1.2	chr1	221636947	221637029	(27319393)	+	GA-rich	Low_complexity	1	83	(0)	327946
2298	16.5	4.7	1.2	chr1	221656194	221656604	(27299818)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	327988
16	22.6	5.6	0.0	chr1	221717427	221717452	(27238970)	+	A-rich	Low_complexity	1	56	(0)	328066
20	7.8	0.0	0.0	chr1	221717453	221717479	(27238943)	+	(AG)n	Simple_repeat	1	27	(0)	328067
700	28.1	6.0	1.0	chr1	221761793	221761997	(27194425)	C	MIRb	SINE/MIR	(0)	268	53	328135
40	4.8	0.0	0.0	chr1	221905693	221905735	(27050687)	+	(AG)n	Simple_repeat	1	43	(0)	328369
62	0.0	0.0	0.0	chr1	222079293	222079345	(26877077)	+	(AC)n	Simple_repeat	1	53	(0)	328618
29	3.0	0.0	0.0	chr1	222079346	222079379	(26877043)	+	(GA)n	Simple_repeat	1	34	(0)	328619
258	23.7	17.7	2.1	chr1	222262824	222262918	(26693504)	+	L2c	LINE/L2	3211	3323	(64)	328866
18	10.7	0.0	5.9	chr1	222262986	222263019	(26693403)	+	(CA)n	Simple_repeat	1	34	(0)	328867
51	10.5	2.4	1.2	chr1	222263019	222263102	(26693320)	+	(AG)n	Simple_repeat	1	86	(0)	328868
1985	16.0	11.0	2.8	chr1	222299549	222299940	(26656482)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	328922
38	2.8	0.0	0.0	chr1	222538413	222538449	(26417973)	+	(GA)n	Simple_repeat	1	37	(0)	329298
632	20.3	4.0	3.4	chr1	222538456	222538603	(26417819)	+	L1ME3	LINE/L1	6185	6333	(2)	329292
62	9.0	4.2	0.8	chr1	222595803	222595922	(26360500)	+	(TC)n	Simple_repeat	1	125	(0)	329400
32	7.4	0.0	0.0	chr1	222595923	222595965	(26360457)	+	(AC)n	Simple_repeat	1	43	(0)	329401
21	20.5	4.8	0.0	chr1	222595966	222595984	(26360438)	+	(ACAGAC)n	Simple_repeat	1	65	(0)	329402
411	12.1	0.0	0.0	chr1	222643707	222643764	(26312658)	+	FLAM_A	SINE/Alu	58	115	(27)	329455
2061	11.3	6.3	1.9	chr1	223288088	223288449	(25667973)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	330483
23	9.4	2.9	0.0	chr1	223700402	223700436	(25255986)	+	(AG)n	Simple_repeat	1	36	(0)	331056
46	6.5	3.1	0.0	chr1	223707237	223707300	(25249122)	+	(TC)n	Simple_repeat	1	66	(0)	331075
3965	7.5	1.1	3.5	chr1	223732186	223732753	(25223669)	C	MER41A	LTR/ERV1	(0)	554	1	331128
2722	16.7	2.9	5.4	chr1	223732754	223733021	(25223401)	C	LTR75_1	LTR/ERV1	(264)	282	4	331127
203	30.8	13.1	4.6	chr1	223777089	223777476	(25178946)	+	L2	LINE/L2	1702	2127	(1292)	331200
2258	23.1	7.3	5.5	chr1	224113727	224113840	(24842582)	C	L1MC4	LINE/L1	(835)	7207	7102	331809
16	25.2	1.7	3.3	chr1	224114132	224114191	(24842231)	+	(GGC)n	Simple_repeat	1	61	(0)	331817
1897	13.8	13.8	1.1	chr1	225078585	225078768	(23877654)	+	MSTA	LTR/ERVL-MaLR	1	212	(216)	333550
137	2.4	0.0	0.0	chr1	225078769	225078898	(23877524)	+	(TC)n	Simple_repeat	1	130	(0)	333551
1897	13.8	13.8	1.1	chr1	225078899	225079086	(23877336)	+	MSTA	LTR/ERVL-MaLR	213	428	(0)	333550
2401	8.1	0.7	0.0	chr1	225679109	225679406	(23277016)	C	AluSp	SINE/Alu	(13)	300	1	334369
18	19.2	0.0	0.0	chr1	225679440	225679465	(23276957)	+	(TC)n	Simple_repeat	1	26	(0)	334370
1429	19.9	6.8	1.8	chr1	225679466	225679607	(23276815)	C	AluJo	SINE/Alu	(16)	296	135	334371
2588	5.9	0.0	0.0	chr1	225679608	225679912	(23276510)	C	AluY	SINE/Alu	(6)	305	1	334372
370	18.3	2.7	1.4	chr1	225965715	225965786	(22990636)	+	MER66C	LTR/ERV1	371	443	(112)	334912
50	0.0	0.0	0.0	chr1	225965789	225965831	(22990591)	+	(AG)n	Simple_repeat	1	43	(0)	334913
8215	7.2	1.6	0.0	chr1	225965843	225966858	(22989564)	+	LTR5A	LTR/ERVK	1	1033	(0)	334914
349	35.8	8.5	1.9	chr1	226002404	226002665	(22953757)	+	MamRTE1	LINE/RTE-BovB	3478	3758	(54)	334985
1612	19.6	1.9	8.2	chr1	226009573	226009889	(22946533)	C	MLT1A	LTR/ERVL-MaLR	(38)	336	33	335004
20	17.0	1.7	5.1	chr1	226062730	226062787	(22893635)	+	(CGC)n	Simple_repeat	1	59	(0)	335131
2279	8.1	0.0	5.6	chr1	226088975	226089294	(22867128)	C	AluSg	SINE/Alu	(8)	302	1	335178
706	30.7	7.0	6.8	chr1	226089295	226089738	(22866684)	+	MLT1J	LTR/ERVL-MaLR	62	508	(4)	335177
359	26.3	13.6	0.0	chr1	226771580	226771712	(22184710)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	442	336440
34	0.0	0.0	0.0	chr1	226771716	226771744	(22184678)	+	(CT)n	Simple_repeat	1	29	(0)	336441
515	28.0	13.4	3.6	chr1	226771841	226772114	(22184308)	C	MLT1K	LTR/ERVL-MaLR	(284)	311	7	336440
101	3.1	0.0	0.0	chr1	226944693	226944791	(22011631)	+	(GA)n	Simple_repeat	1	99	(0)	336734
1602	28.2	8.4	7.9	chr1	227153495	227155030	(21801392)	+	L1MEd	LINE/L1	3236	4780	(1366)	336988
2362	23.3	17.9	2.1	chr1	227251737	227253173	(21703249)	+	L1MEg	LINE/L1	2584	4607	(1539)	337158
57	6.0	5.8	0.0	chr1	227253182	227253268	(21703154)	+	(AG)n	Simple_repeat	1	92	(0)	337160
1846	14.1	0.0	0.0	chr1	227253350	227253604	(21702818)	+	AluSx1	SINE/Alu	37	291	(21)	337161
22	3.9	0.0	0.0	chr1	227371394	227371420	(21585002)	+	(TC)n	Simple_repeat	1	27	(0)	337396
1414	14.2	1.0	0.0	chr1	227371520	227371724	(21584698)	+	AluJb	SINE/Alu	86	292	(20)	337397
74	10.4	3.9	0.8	chr1	227433760	227433911	(21522511)	+	GA-rich	Low_complexity	1	156	(0)	337510
52	34.3	1.7	1.3	chr1	227559169	227559403	(21397019)	+	(CT)n	Simple_repeat	1	239	(0)	337638
19	13.6	0.0	4.5	chr1	227559373	227559416	(21397006)	+	(TGTCTG)n	Simple_repeat	1	44	(0)	337639
18	4.8	0.0	0.0	chr1	227947298	227947319	(21009103)	+	(TC)n	Simple_repeat	1	22	(0)	338086
1499	23.2	6.6	8.5	chr1	228501092	228501759	(20454663)	C	MER77B	LTR/ERVL	(6)	694	41	338819
63	31.5	1.7	0.8	chr1	228622248	228622488	(20333934)	+	GA-rich	Low_complexity	1	245	(0)	338916
18	24.5	0.0	0.0	chr1	228646795	228646837	(20309585)	+	(CA)n	Simple_repeat	1	43	(0)	338981
1960	17.4	6.9	1.2	chr1	229363694	229364100	(19592322)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	340121
16	23.3	2.2	0.0	chr1	229626252	229626296	(19330126)	+	(GCC)n	Simple_repeat	1	46	(0)	340622
4518	7.1	0.7	0.0	chr1	230151683	230152232	(18804190)	C	MER41A	LTR/ERV1	(0)	554	1	341476
36	2.9	0.0	0.0	chr1	230156211	230156245	(18800177)	+	(GA)n	Simple_repeat	1	35	(0)	341483
21	0.0	0.0	0.0	chr1	230156246	230156268	(18800154)	+	(TG)n	Simple_repeat	1	23	(0)	341484
18	22.0	0.0	0.0	chr1	230292695	230292731	(18663691)	+	(T)n	Simple_repeat	1	37	(0)	341658
11	16.4	5.9	0.0	chr1	230978233	230978266	(17978156)	+	(CTGCCAC)n	Simple_repeat	1	36	(0)	342717
14	17.5	0.0	6.8	chr1	230978359	230978402	(17978020)	+	(GGC)n	Simple_repeat	1	44	(0)	342718
194	22.9	4.8	1.9	chr1	231047186	231047791	(17908631)	+	(TCCT)n	Simple_repeat	1	635	(0)	342821
1040	27.2	4.3	4.3	chr1	231193322	231193503	(17762919)	+	MLT1A	LTR/ERVL-MaLR	1	192	(182)	343075
56	0.0	2.0	0.0	chr1	231193504	231193554	(17762868)	+	(CT)n	Simple_repeat	1	52	(0)	343076
1040	27.2	4.3	4.3	chr1	231193555	231193583	(17762839)	+	MLT1A	LTR/ERVL-MaLR	193	219	(155)	343075
2203	15.3	4.2	2.4	chr1	231193584	231194005	(17762417)	C	MSTB1	LTR/ERVL-MaLR	(2)	430	1	343077
2542	27.9	2.9	8.0	chr1	231441548	231442693	(17513729)	C	L2a	LINE/L2	(1)	3425	2340	343504
992	25.2	4.2	1.8	chr1	231530053	231530331	(17426091)	C	MLT1F1	LTR/ERVL-MaLR	(283)	286	1	343649
17	0.0	0.0	0.0	chr1	231734482	231734500	(17221922)	+	(CT)n	Simple_repeat	1	19	(0)	343989
21	16.3	0.0	0.0	chr1	231734500	231734535	(17221887)	+	(CA)n	Simple_repeat	1	36	(0)	343990
5809	17.8	6.1	2.6	chr1	233121632	233122073	(15834349)	+	L1MC3	LINE/L1	6401	6851	(934)	345905
41	0.0	0.0	0.0	chr1	233122074	233122108	(15834314)	+	(AC)n	Simple_repeat	1	35	(0)	345906
5809	17.8	6.1	2.6	chr1	233122109	233122527	(15833895)	+	L1MC3	LINE/L1	6852	7299	(486)	345905
1533	26.0	7.4	3.2	chr1	233635662	233636668	(15319754)	C	L2a	LINE/L2	(0)	3426	2378	346694
4509	13.8	1.3	1.7	chr1	233665264	233665973	(15290449)	C	LTR62	LTR/ERVL	(2)	707	1	346733
294	12.6	3.9	0.5	chr1	233709952	233710008	(15246414)	C	L1ME3G	LINE/L1	(315)	577	517	346793
59	3.5	0.0	0.0	chr1	233904440	233904498	(15051924)	+	(AG)n	Simple_repeat	1	59	(0)	347066
17	18.1	0.0	7.0	chr1	233904579	233904635	(15051787)	+	G-rich	Low_complexity	1	57	(0)	347067
51	8.6	1.3	0.0	chr1	233948181	233948256	(15008166)	+	(AGAG)n	Simple_repeat	1	77	(0)	347144
24	6.1	2.9	0.0	chr1	234368521	234368554	(14587868)	+	(AG)n	Simple_repeat	1	35	(0)	347755
42	0.0	0.0	0.0	chr1	234502217	234502252	(14454170)	+	(AC)n	Simple_repeat	1	36	(0)	347978
19	0.0	0.0	0.0	chr1	234523923	234523943	(14432479)	+	(TG)n	Simple_repeat	1	21	(0)	348028
37	0.0	0.0	0.0	chr1	234523943	234523983	(14432439)	+	(TA)n	Simple_repeat	1	41	(0)	348029
53	0.0	0.0	0.0	chr1	234523984	234524028	(14432394)	+	(AG)n	Simple_repeat	1	45	(0)	348030
834	16.2	4.1	8.7	chr1	234546699	234546891	(14409531)	C	MER33	DNA/hAT-Charlie	(35)	289	101	348060
34	26.1	1.6	1.4	chr1	234546919	234547040	(14409382)	+	GA-rich	Low_complexity	1	122	(0)	348062
16	25.9	0.0	1.9	chr1	234610920	234610971	(14345451)	+	G-rich	Low_complexity	1	52	(0)	348168
44	20.1	1.1	0.0	chr1	234641043	234641133	(14315289)	+	GA-rich	Low_complexity	1	92	(0)	348213
644	25.6	7.2	5.9	chr1	234641136	234641422	(14315000)	C	Tigger15a	DNA/TcMar-Tigger	(290)	425	135	348212
12	14.4	0.0	0.0	chr1	234724911	234724934	(14231488)	+	(GAGG)n	Simple_repeat	1	24	(0)	348336
16	5.3	0.0	0.0	chr1	234746083	234746102	(14210320)	+	(AG)n	Simple_repeat	1	20	(0)	348372
16	27.4	1.9	0.0	chr1	234962493	234962545	(13993877)	+	(ACAT)n	Simple_repeat	1	54	(0)	348744
242	33.3	0.0	0.0	chr1	234975375	234975449	(13980973)	+	LFSINE_Vert	SINE/tRNA	2	76	(383)	348765
2605	2.9	0.0	2.6	chr1	234986241	234986546	(13969876)	+	AluYm1	SINE/Alu	1	298	(13)	348781
2289	18.3	2.5	8.8	chr1	234986547	234987003	(13969419)	+	LTR54	LTR/ERV1	75	510	(0)	348779
315	25.2	13.3	0.0	chr1	235022470	235022580	(13933842)	+	L3b	LINE/CR1	4691	4818	(414)	348848
56	0.0	0.0	0.0	chr1	235104825	235104872	(13851550)	+	(AC)n	Simple_repeat	1	48	(0)	349042
301	12.2	3.5	6.1	chr1	236685805	236685952	(12270470)	+	HERV17-int	LTR/ERV1	704	847	(7779)	352102
40	14.7	3.0	4.9	chr1	236685955	236686053	(12270369)	+	GA-rich	Low_complexity	1	102	(0)	352103
1953	15.8	11.2	4.0	chr1	236992419	236992814	(11963608)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	352603
674	30.1	11.4	2.6	chr1	240424910	240425204	(8531218)	C	L2a	LINE/L2	(2)	3424	3098	357604
36	0.0	0.0	0.0	chr1	240425205	240425235	(8531187)	+	(GA)n	Simple_repeat	1	31	(0)	357605
674	30.1	11.4	2.6	chr1	240425236	240425283	(8531139)	C	L2a	LINE/L2	(329)	3097	3048	357604
44	0.0	0.0	0.0	chr1	241500603	241500640	(7455782)	+	(GA)n	Simple_repeat	1	38	(0)	359378
68	0.0	0.0	0.0	chr1	241528721	241528778	(7427644)	+	(GA)n	Simple_repeat	1	58	(0)	359416
19	22.5	0.0	8.0	chr1	241531207	241531227	(7425195)	+	A-rich	Low_complexity	1	41	(34)	359418
24	14.4	0.0	0.0	chr1	241531228	241531266	(7425156)	+	(GA)n	Simple_repeat	1	39	(0)	359419
19	22.5	0.0	8.0	chr1	241531267	241531281	(7425141)	+	A-rich	Low_complexity	42	75	(0)	359418
574	24.1	2.9	0.0	chr1	241531323	241531455	(7424967)	+	L1ME4b	LINE/L1	756	892	(0)	359420
25	17.5	0.0	0.0	chr1	241552145	241552204	(7404218)	+	GA-rich	Low_complexity	1	60	(0)	359452
4382	12.6	0.0	0.3	chr1	241696323	241696958	(7259464)	C	MER41B	LTR/ERV1	(0)	634	1	359670
2014	10.6	0.0	0.0	chr1	241735534	241735788	(7220634)	C	AluSz	SINE/Alu	(11)	301	47	359748
42	21.2	0.0	2.9	chr1	241735789	241735855	(7220567)	+	(CT)n	Simple_repeat	2	67	(0)	359749
41	0.0	0.0	0.0	chr1	241735856	241735890	(7220532)	+	(TG)n	Simple_repeat	1	35	(0)	359750
42	21.2	0.0	2.9	chr1	241735891	241735904	(7220518)	+	(CT)n	Simple_repeat	2	14	(0)	359751
1657	26.0	5.0	1.8	chr1	241806938	241807560	(7148862)	+	L1ME3B	LINE/L1	5615	6258	(158)	359855
48	7.7	2.2	4.3	chr1	241807564	241807653	(7148769)	+	(GAAA)n	Simple_repeat	1	92	(0)	359864
2372	9.3	0.0	0.0	chr1	241807689	241807977	(7148445)	+	AluSq2	SINE/Alu	1	289	(24)	359865
798	11.2	4.8	8.6	chr1	241829261	241829409	(7127013)	C	L1PA13	LINE/L1	(3)	6160	6020	359906
32	3.2	0.0	0.0	chr1	241829410	241829441	(7126981)	+	(TC)n	Simple_repeat	1	32	(0)	359907
798	11.2	4.8	8.6	chr1	241829442	241829466	(7126956)	C	L1PA13	LINE/L1	(144)	6019	5993	359906
353	26.1	9.8	2.2	chr1	241848592	241848771	(7107651)	C	MER102b	DNA/hAT-Charlie	(130)	211	17	359941
2294	6.9	0.4	0.0	chr1	244298926	244299202	(4657220)	+	AluSq	SINE/Alu	1	278	(35)	363925
21	4.0	0.0	0.0	chr1	244299210	244299235	(4657187)	+	(GA)n	Simple_repeat	1	26	(0)	363926
345	30.8	5.9	2.0	chr1	244354945	244355090	(4601332)	+	L2b	LINE/L2	3220	3371	(4)	364042
272	31.8	23.8	0.7	chr1	244355099	244355253	(4601169)	+	MIRb	SINE/MIR	9	210	(58)	364043
830	31.6	17.1	5.2	chr1	244636948	244639404	(4317018)	+	L2c	LINE/L2	360	3196	(191)	364484
22	0.0	0.0	0.0	chr1	245180293	245180316	(3776106)	+	(AG)n	Simple_repeat	1	24	(0)	365607
681	24.9	9.6	1.3	chr1	245180318	245180545	(3775877)	+	MIR	SINE/MIR	13	261	(1)	365608
587	22.6	11.2	2.0	chr1	245307517	245307719	(3648703)	C	L1ME3Cz	LINE/L1	(0)	997	774	365841
1856	4.3	0.0	0.0	chr1	245307743	245307953	(3648469)	C	AluY	SINE/Alu	(14)	297	87	365842
1756	13.9	0.0	6.1	chr1	245368854	245369148	(3587274)	+	AluJb	SINE/Alu	2	278	(34)	365935
36	2.9	0.0	0.0	chr1	245369164	245369198	(3587224)	+	(AG)n	Simple_repeat	1	35	(0)	365936
15	0.0	0.0	4.3	chr1	245369199	245369217	(3587205)	+	(AGAC)n	Simple_repeat	4	22	(0)	365937
290	30.9	2.0	0.0	chr1	245369219	245369315	(3587107)	C	MLT1J2	LTR/ERVL-MaLR	(335)	113	15	365934
46	0.0	0.0	0.0	chr1	245510577	245510615	(3445807)	+	(TC)n	Simple_repeat	1	39	(0)	366172
31	20.8	1.4	0.0	chr1	245510618	245510689	(3445733)	+	(CCCT)n	Simple_repeat	1	73	(0)	366173
61	0.0	0.0	0.0	chr1	245612055	245612106	(3344316)	+	(TG)n	Simple_repeat	1	52	(0)	366317
19	0.0	0.0	0.0	chr1	245612107	245612127	(3344295)	+	(AG)n	Simple_repeat	1	21	(0)	366318
1982	14.1	1.1	1.4	chr1	245612128	245612410	(3344012)	C	AluJo	SINE/Alu	(30)	282	1	366319
46	17.9	0.0	0.0	chr1	245785630	245785717	(3170705)	+	GA-rich	Low_complexity	1	88	(0)	366525
1831	15.4	0.7	2.1	chr1	245785720	245786004	(3170418)	C	AluJr4	SINE/Alu	(31)	281	1	366526
2054	17.6	18.7	3.7	chr1	246110332	246110849	(2845573)	C	LTR18B	LTR/ERVL	(0)	614	1	366955
775	5.3	0.0	0.0	chr1	246117689	246117783	(2838639)	C	L1PA10	LINE/L1	(10)	6158	6064	366965
4019	8.8	5.1	0.0	chr1	247110624	247111180	(1845242)	+	LTR14C	LTR/ERVK	1	587	(0)	368662
1799	10.2	10.2	6.8	chr1	247283970	247284132	(1672290)	C	THE1D	LTR/ERVL-MaLR	(0)	381	215	368903
53	3.9	0.0	0.0	chr1	247284133	247284186	(1672236)	+	(GA)n	Simple_repeat	1	54	(0)	368904
1799	10.2	10.2	6.8	chr1	247284187	247284389	(1672033)	C	THE1D	LTR/ERVL-MaLR	(167)	214	1	368903
2544	20.9	6.5	4.8	chr1	247374735	247374850	(1581572)	+	LTR8A	LTR/ERV1	1	124	(603)	369051
4700	11.6	2.3	2.2	chr1	247374851	247375540	(1580882)	+	LTR8	LTR/ERV1	1	691	(0)	369052
31	0.0	0.0	0.0	chr1	247852885	247852918	(1103504)	+	(AC)n	Simple_repeat	1	34	(0)	369722
48	0.0	0.0	0.0	chr1	247852919	247852959	(1103463)	+	(AG)n	Simple_repeat	1	41	(0)	369723
2172	15.2	1.0	5.5	chr1	247852962	247853379	(1103043)	+	LOR1b	LTR/ERV1	63	461	(0)	369724
652	20.2	14.8	3.6	chr1	247906641	247906969	(1049453)	C	LTR37A	LTR/ERV1	(9)	417	46	369799
241	2.5	5.3	4.1	chr1	247906982	247907378	(1049044)	+	(TTTC)n	Simple_repeat	1	418	(0)	369800
15	5.6	0.0	0.0	chr10	1049464	1049482	(132747940)	+	(C)n	Simple_repeat	1	19	(0)	372220
16	24.7	0.0	2.1	chr10	2978132	2978178	(130819244)	+	GA-rich	Low_complexity	1	47	(0)	374442
17	4.3	4.2	0.0	chr10	2978235	2978258	(130819164)	+	(TC)n	Simple_repeat	1	25	(0)	374443
110	37.9	0.9	3.5	chr10	2987142	2987716	(130809706)	+	(TTTC)n	Simple_repeat	1	580	(0)	374461
92	19.6	1.5	0.5	chr10	3047718	3047914	(130749508)	+	(CTCT)n	Simple_repeat	1	200	(0)	374551
80	30.7	0.7	1.4	chr10	3056558	3056788	(130740634)	+	(TC)n	Simple_repeat	1	230	(0)	374565
31	0.0	0.0	0.0	chr10	3056789	3056815	(130740607)	+	(TG)n	Simple_repeat	1	27	(0)	374566
80	30.7	0.7	1.4	chr10	3056816	3056862	(130740560)	+	(TC)n	Simple_repeat	1	46	(0)	374567
440	19.5	5.4	0.0	chr10	3470754	3470840	(130326582)	+	MER2B	DNA/TcMar-Tigger	192	283	(53)	375145
108	2.0	0.0	0.0	chr10	3470845	3470945	(130326477)	+	(GA)n	Simple_repeat	1	101	(0)	375146
349	27.1	3.3	6.3	chr10	3861106	3861231	(129936191)	C	MARNA	DNA/TcMar-Mariner	(306)	280	159	375664
21	0.0	0.0	0.0	chr10	3861345	3861367	(129936055)	+	(TC)n	Simple_repeat	1	23	(0)	375665
37	0.0	0.0	0.0	chr10	3861368	3861399	(129936023)	+	(CA)n	Simple_repeat	1	32	(0)	375666
2316	9.2	0.0	0.0	chr10	3861460	3861753	(129935669)	C	AluSx	SINE/Alu	(18)	294	1	375667
1272	26.3	4.8	2.3	chr10	3879918	3880264	(129917158)	C	MLT1A	LTR/ERVL-MaLR	(18)	356	1	375701
1910	15.6	12.7	1.8	chr10	4943990	4944170	(128853252)	+	MSTA	LTR/ERVL-MaLR	1	210	(218)	377129
36	0.0	2.6	2.5	chr10	4944171	4944209	(128853213)	+	(TC)n	Simple_repeat	1	40	(0)	377130
1910	15.6	12.7	1.8	chr10	4944210	4944407	(128853015)	+	MSTA	LTR/ERVL-MaLR	211	427	(1)	377129
191	28.7	2.5	2.2	chr10	5480229	5480300	(128317122)	C	MIR1_Amn	SINE/MIR	(89)	179	110	377814
44	0.0	0.0	0.0	chr10	5554771	5554808	(128242614)	+	(AC)n	Simple_repeat	1	38	(0)	377917
20	13.7	0.0	0.0	chr10	5554809	5554840	(128242582)	+	(TC)n	Simple_repeat	1	32	(0)	377918
33	0.0	0.0	0.0	chr10	5554942	5554969	(128242453)	+	(GT)n	Simple_repeat	1	28	(0)	377919
60	23.8	0.7	1.9	chr10	5560184	5560337	(128237085)	+	(TC)n	Simple_repeat	1	155	(0)	377923
51	16.0	2.1	0.0	chr10	6404195	6404287	(127393135)	+	GA-rich	Low_complexity	1	95	(0)	379455
259	17.8	1.1	2.5	chr10	6404368	6404903	(127392519)	+	(TTCT)n	Simple_repeat	1	528	(0)	379456
36	0.0	0.0	0.0	chr10	7015538	7015568	(126781854)	+	(CA)n	Simple_repeat	1	31	(0)	380425
741	24.5	2.5	0.6	chr10	7015635	7015794	(126781628)	C	MER63A	DNA/hAT-Blackjack	(47)	163	1	380426
368	26.1	5.2	0.0	chr10	7028322	7028413	(126769009)	C	Charlie9	DNA/hAT-Charlie	(2660)	97	1	380441
2069	15.7	12.4	2.6	chr10	7028547	7028931	(126768491)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	380442
1710	23.2	0.8	4.6	chr10	7533593	7533619	(126263803)	C	MLT2D	LTR/ERVL	(13)	401	380	381182
30	3.5	0.0	0.0	chr10	7533620	7533649	(126263773)	+	(TG)n	Simple_repeat	1	30	(0)	381183
1710	23.2	0.8	4.6	chr10	7533650	7534037	(126263385)	C	MLT2D	LTR/ERVL	(35)	379	2	381182
52	7.1	2.7	0.0	chr10	11005230	11005303	(122792119)	+	(AG)n	Simple_repeat	1	76	(0)	386424
60	0.0	0.0	0.0	chr10	11202902	11202952	(122594470)	+	(TC)n	Simple_repeat	1	51	(0)	386604
18	0.0	0.0	0.0	chr10	11202953	11202972	(122594450)	+	(GT)n	Simple_repeat	1	20	(0)	386605
23	14.5	0.0	0.0	chr10	11211755	11211813	(122585609)	+	(TG)n	Simple_repeat	1	59	(0)	386611
49	0.0	0.0	0.0	chr10	11211814	11211855	(122585567)	+	(GT)n	Simple_repeat	1	42	(0)	386612
49	0.0	0.0	0.0	chr10	11721569	11721610	(122075812)	+	(TG)n	Simple_repeat	1	42	(0)	387401
24	6.8	0.0	0.0	chr10	11721611	11721641	(122075781)	+	(AG)n	Simple_repeat	1	31	(0)	387402
1782	14.0	1.9	0.0	chr10	11721642	11721898	(122075524)	C	AluJo	SINE/Alu	(30)	282	21	387403
2228	11.7	1.3	0.0	chr10	12056449	12056748	(121740674)	C	AluSz	SINE/Alu	(8)	304	1	388046
35	13.0	4.3	1.4	chr10	12056749	12056817	(121740605)	+	(TC)n	Simple_repeat	1	72	(0)	388047
1574	22.5	6.0	1.4	chr10	12056820	12057184	(121740238)	+	MLT1F2	LTR/ERVL-MaLR	177	559	(1)	388048
1627	22.4	3.2	14.8	chr10	12562973	12563601	(121233821)	C	MLT2B3	LTR/ERVL	(0)	554	1	389167
55	3.7	0.0	0.0	chr10	12563665	12563720	(121233702)	+	(GA)n	Simple_repeat	1	56	(0)	389168
1525	19.2	0.4	2.9	chr10	14182262	14182537	(119614885)	+	AluJr	SINE/Alu	5	273	(39)	392041
40	0.0	0.0	0.0	chr10	14737767	14737800	(119059622)	+	(TC)n	Simple_repeat	1	34	(0)	392982
396	29.4	4.7	7.7	chr10	14737998	14738218	(119059204)	C	MIRb	SINE/MIR	(9)	259	46	392983
199	26.0	13.5	0.0	chr10	14960106	14960201	(118837221)	C	MIR3	SINE/MIR	(34)	174	64	393370
48	0.0	0.0	0.0	chr10	14965676	14965716	(118831706)	+	(GA)n	Simple_repeat	1	41	(0)	393384
13	15.5	4.1	5.9	chr10	15097302	15097350	(118700072)	+	(GCGAG)n	Simple_repeat	1	51	(0)	393620
80	25.1	2.2	2.8	chr10	15434269	15434586	(118362836)	+	(TC)n	Simple_repeat	1	316	(0)	394253
48	0.0	0.0	0.0	chr10	15434587	15434627	(118362795)	+	(CA)n	Simple_repeat	1	41	(0)	394254
4147	10.3	1.9	4.6	chr10	15627751	15628324	(118169098)	+	MER41B	LTR/ERV1	1	570	(64)	394578
86	35.9	3.2	0.6	chr10	16566352	16566818	(117230604)	+	GA-rich	Low_complexity	1	482	(0)	396061
353	31.5	0.0	0.0	chr10	17134820	17134908	(116662514)	C	Tigger20a	DNA/TcMar-Tigger	(879)	94	6	396858
35	0.0	0.0	0.0	chr10	17134963	17134992	(116662430)	+	(GA)n	Simple_repeat	1	30	(0)	396861
706	33.6	8.2	7.4	chr10	17212634	17213334	(116584088)	+	LTR78	LTR/ERV1	479	1185	(119)	396977
779	26.0	4.0	1.8	chr10	17662596	17662818	(116134604)	+	MIR	SINE/MIR	6	233	(29)	397832
1984	14.8	0.0	0.3	chr10	18358105	18358387	(115439035)	C	AluSz	SINE/Alu	(30)	282	1	398956
336	31.1	6.2	0.0	chr10	18358389	18358494	(115438928)	C	L2a	LINE/L2	(0)	3426	3314	398957
82	1.4	0.0	0.0	chr10	18358498	18358571	(115438851)	+	(CT)n	Simple_repeat	1	74	(0)	398958
1714	13.1	17.8	5.6	chr10	18479517	18479889	(115317533)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	399186
36	29.0	0.0	0.0	chr10	21098180	21098276	(112699146)	+	(AC)n	Simple_repeat	1	97	(0)	402976
197	27.1	1.4	7.9	chr10	21098335	21098410	(112699012)	+	L2c	LINE/L2	3309	3379	(8)	402977
1482	21.5	5.9	4.2	chr10	21204251	21204423	(112592999)	+	MLT1B	LTR/ERVL-MaLR	1	183	(207)	403144
30	6.1	0.0	0.0	chr10	21204424	21204458	(112592964)	+	(TC)n	Simple_repeat	1	35	(0)	403145
1482	21.5	5.9	4.2	chr10	21204459	21204667	(112592755)	+	MLT1B	LTR/ERVL-MaLR	184	390	(0)	403144
15	11.6	3.3	3.2	chr10	21315942	21315971	(112481451)	+	(TC)n	Simple_repeat	1	31	(0)	403393
14	18.2	0.0	4.9	chr10	21520459	21520499	(112276923)	+	(CCCTCC)n	Simple_repeat	1	41	(0)	403864
17	0.0	0.0	0.0	chr10	21520647	21520665	(112276757)	+	(CT)n	Simple_repeat	1	19	(0)	403865
2252	25.4	10.0	4.1	chr10	21570375	21571654	(112225768)	C	L1MEc	LINE/L1	(4993)	1407	44	403960
478	29.5	7.8	2.9	chr10	22616325	22616495	(111180927)	C	MIRb	SINE/MIR	(34)	234	55	405517
27	16.9	0.0	0.0	chr10	23096327	23096373	(110701049)	+	(TG)n	Simple_repeat	1	47	(0)	406264
1956	26.5	13.5	5.0	chr10	23212368	23212778	(110584644)	+	L1ME3C	LINE/L1	183	625	(1587)	406445
54	0.0	0.0	0.0	chr10	23212779	23212824	(110584598)	+	(GA)n	Simple_repeat	1	46	(0)	406447
1956	25.1	17.5	4.9	chr10	23212825	23213647	(110583775)	+	L1ME3C	LINE/L1	626	1640	(5463)	406445
905	21.1	3.0	5.4	chr10	23366202	23366406	(110431016)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	191	406707
48	15.4	0.0	0.0	chr10	23366414	23366493	(110430929)	+	GA-rich	Low_complexity	1	80	(0)	406708
1839	12.5	5.3	2.7	chr10	23366532	23366827	(110430595)	C	AluJr	SINE/Alu	(7)	305	2	406709
47	4.2	0.0	0.0	chr10	24770325	24770373	(109027049)	+	(GA)n	Simple_repeat	1	49	(0)	409079
2011	17.0	5.1	10.9	chr10	25149735	25149785	(108647637)	C	MLT2D	LTR/ERVL	(0)	414	367	409789
44	0.0	0.0	0.0	chr10	25149786	25149823	(108647599)	+	(TG)n	Simple_repeat	1	38	(0)	409790
2011	17.0	5.1	10.9	chr10	25149824	25150212	(108647210)	C	MLT2D	LTR/ERVL	(48)	366	1	409789
14	23.4	0.0	2.4	chr10	25227557	25227598	(108569824)	+	(TAT)n	Simple_repeat	1	42	(0)	409917
229	31.1	4.2	3.2	chr10	25227651	25227743	(108569679)	C	L2a	LINE/L2	(47)	3379	3286	409918
1245	13.2	0.0	0.0	chr10	26675713	26675886	(107121536)	+	AluYc	SINE/Alu	124	297	(2)	412111
74	6.1	0.9	1.8	chr10	26675887	26675994	(107121428)	+	(GAAG)n	Simple_repeat	1	109	(0)	412112
31	5.9	0.0	0.0	chr10	27243093	27243128	(106554294)	+	(CA)n	Simple_repeat	1	36	(0)	413148
237	32.6	6.2	0.0	chr10	27243132	27243266	(106554156)	+	Helitron3Na_Mam	RC/Helitron	12	155	(331)	413149
30	25.6	2.4	0.0	chr10	27253800	27253882	(106543540)	+	(CA)n	Simple_repeat	1	85	(0)	413159
309	31.9	2.2	1.5	chr10	27656625	27656761	(106140661)	C	MER5A	DNA/hAT-Charlie	(51)	138	1	413788
69	0.0	0.0	0.0	chr10	27656822	27656880	(106140542)	+	(GT)n	Simple_repeat	1	59	(0)	413789
28	0.0	2.8	0.0	chr10	27656881	27656912	(106140510)	+	(AG)n	Simple_repeat	2	34	(0)	413790
631	29.6	5.5	4.0	chr10	28405279	28405663	(105391759)	+	MLT1J2	LTR/ERVL-MaLR	22	448	(0)	415019
16	18.4	8.4	2.6	chr10	28823266	28823336	(104974086)	+	(CTCTGC)n	Simple_repeat	1	77	(0)	415816
518	25.8	6.6	7.0	chr10	28991998	28992210	(104805212)	C	L2c	LINE/L2	(0)	3387	3176	416095
1274	24.4	2.2	4.8	chr10	29009605	29009979	(104787443)	C	MLT1A	LTR/ERVL-MaLR	(8)	366	2	416136
1836	13.6	0.0	0.3	chr10	29136516	29136811	(104660611)	C	L1MA6	LINE/L1	(0)	6300	6006	416374
815	30.3	4.9	4.8	chr10	29136813	29137240	(104660182)	C	MLT1H1	LTR/ERVL-MaLR	(115)	480	2	416373
51	0.0	0.0	0.0	chr10	29258623	29258666	(104538756)	+	(CA)n	Simple_repeat	1	44	(0)	416578
21	0.0	3.9	0.0	chr10	29258667	29258692	(104538730)	+	(GA)n	Simple_repeat	1	27	(0)	416579
481	30.0	4.6	8.7	chr10	29258693	29258811	(104538611)	+	L1ME4a	LINE/L1	5316	5430	(694)	416577
2467	18.0	5.9	1.1	chr10	29306645	29306796	(104490626)	C	L1MA9	LINE/L1	(0)	6312	6155	416650
40	0.0	0.0	0.0	chr10	29306797	29306830	(104490592)	+	(TG)n	Simple_repeat	1	34	(0)	416651
33	0.0	0.0	0.0	chr10	29306840	29306867	(104490555)	+	(GA)n	Simple_repeat	1	28	(0)	416652
2467	18.0	5.9	1.1	chr10	29306868	29306878	(104490544)	C	L1MA9	LINE/L1	(164)	6148	6135	416650
1931	14.6	0.4	0.0	chr10	29306879	29307152	(104490270)	C	AluSz	SINE/Alu	(36)	276	2	416653
11338	9.8	3.4	3.0	chr10	29436720	29438848	(104358574)	C	HERVIP10FH-int	LTR/ERV1	(2906)	2196	1	416891
2214	17.3	2.6	12.0	chr10	29445073	29445546	(104351876)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	416907
18	29.4	0.0	0.0	chr10	29509276	29509329	(104288093)	+	G-rich	Low_complexity	1	54	(0)	416989
59	0.0	0.0	0.0	chr10	29509331	29509380	(104288042)	+	(GA)n	Simple_repeat	1	50	(0)	416990
553	29.8	18.0	4.8	chr10	29651306	29651618	(104145804)	+	L2a	LINE/L2	1872	2285	(1134)	417200
36	0.0	0.0	0.0	chr10	29651619	29651649	(104145773)	+	(TC)n	Simple_repeat	1	31	(0)	417201
553	29.8	18.0	4.8	chr10	29651650	29651980	(104145442)	+	L2a	LINE/L2	2286	2619	(800)	417200
980	29.3	8.0	11.3	chr10	30219538	30219716	(103577706)	+	L1MC4	LINE/L1	7763	7934	(108)	418273
35	10.6	0.0	0.0	chr10	30219737	30219787	(103577635)	+	(GA)n	Simple_repeat	1	51	(0)	418275
275	21.8	13.9	3.3	chr10	30219811	30219930	(103577492)	+	L1MC4	LINE/L1	6376	6441	(3)	418273
36	0.0	0.0	0.0	chr10	30432979	30433009	(103364413)	+	(GA)n	Simple_repeat	1	31	(0)	418705
44	4.4	0.0	0.0	chr10	30544107	30544153	(103253269)	+	(TC)n	Simple_repeat	1	47	(0)	418939
1927	9.9	4.6	1.5	chr10	30544156	30544456	(103252966)	C	AluSz	SINE/Alu	(0)	312	1	418940
27	5.8	0.0	0.0	chr10	31243288	31243311	(102554111)	+	(CT)n	Simple_repeat	1	24	(0)	420060
56	0.0	0.0	0.0	chr10	31243312	31243359	(102554063)	+	(CA)n	Simple_repeat	1	48	(0)	420061
27	5.8	0.0	0.0	chr10	31243360	31243371	(102554051)	+	(CT)n	Simple_repeat	1	12	(0)	420062
18	17.8	2.2	2.1	chr10	31319443	31319488	(102477934)	+	(CCG)n	Simple_repeat	1	47	(0)	420165
16	26.5	1.6	3.2	chr10	31319540	31319601	(102477821)	+	(CCG)n	Simple_repeat	1	63	(0)	420165
13	4.3	3.9	3.7	chr10	32347086	32347114	(101450308)	+	(CCGCT)n	Simple_repeat	1	29	(0)	421822
11	20.1	9.1	2.8	chr10	35127069	35127134	(98670288)	+	(GCCGGCT)n	Simple_repeat	1	72	(0)	426040
17	20.1	3.5	7.8	chr10	35127230	35127316	(98670106)	+	(AGCGG)n	Simple_repeat	1	90	(0)	426041
14	25.8	0.0	3.7	chr10	35127384	35127437	(98669985)	+	(CGCCGCC)n	Simple_repeat	1	54	(0)	426042
30	0.0	0.0	0.0	chr10	35465906	35465938	(98331484)	+	(AG)n	Simple_repeat	1	33	(0)	426620
46	4.3	0.0	0.0	chr10	35465939	35465986	(98331436)	+	(GT)n	Simple_repeat	1	48	(0)	426621
12	19.9	2.9	0.0	chr10	35643412	35643446	(98153976)	+	G-rich	Low_complexity	1	36	(0)	426873
60	27.1	6.0	0.0	chr10	35643632	35643847	(98153575)	+	(TC)n	Simple_repeat	1	229	(0)	426874
2907	7.9	11.5	0.0	chr10	42768848	42769277	(91028145)	+	LTR19A	LTR/ERV1	1	486	(0)	432524
27	22.4	1.6	0.0	chr10	43348944	43349005	(90448417)	+	GA-rich	Low_complexity	1	63	(0)	433304
1132	17.3	3.0	0.7	chr10	43418047	43418377	(90379045)	+	MER74C	LTR/ERVL	13	430	(128)	433460
1853	12.8	1.4	3.6	chr10	43418428	43418731	(90378691)	+	AluSz	SINE/Alu	8	304	(8)	433461
2213	10.3	13.8	1.3	chr10	43599298	43599671	(90197751)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	433831
6131	20.3	4.7	2.3	chr10	43622572	43623420	(90174002)	+	L1MD	LINE/L1	4266	5141	(1005)	433867
1381	19.6	9.3	2.4	chr10	43623423	43623720	(90173702)	C	MSTD	LTR/ERVL-MaLR	(75)	321	1	433870
33	0.0	0.0	0.0	chr10	44008352	44008379	(89789043)	+	(TC)n	Simple_repeat	1	28	(0)	434386
315	24.4	2.4	0.0	chr10	44886256	44886337	(88911085)	C	L2	LINE/L2	(1506)	1913	1830	435364
70	1.6	0.0	0.0	chr10	44886338	44886401	(88911021)	+	(TC)n	Simple_repeat	1	64	(0)	435365
287	22.6	3.5	0.0	chr10	45409376	45409459	(88387963)	C	L1MEj	LINE/L1	(1389)	771	685	436019
95	11.2	0.0	0.0	chr10	45409494	45409637	(88387785)	+	(TCTC)n	Simple_repeat	1	144	(0)	436023
4627	10.8	1.1	0.2	chr10	45410801	45411428	(88385994)	C	MER41B	LTR/ERV1	(0)	634	1	436025
200	36.3	9.1	3.1	chr10	46018360	46018555	(87778867)	+	L3	LINE/CR1	3438	3646	(453)	437023
242	26.8	5.3	0.0	chr10	46018589	46018659	(87778763)	+	Plat_L3	LINE/CR1	3199	3273	(313)	437024
15	14.4	3.0	2.9	chr10	46035998	46036030	(87761392)	+	GA-rich	Low_complexity	1	34	(0)	437059
2568	5.0	0.0	0.3	chr10	46049065	46049364	(87748058)	+	AluY	SINE/Alu	1	299	(12)	437088
446	26.1	1.1	6.2	chr10	46049365	46049438	(87747984)	C	L1ME3Cz	LINE/L1	(417)	5707	5640	437087
2334	8.4	0.3	0.0	chr10	46049439	46049734	(87747688)	+	AluSp	SINE/Alu	1	297	(16)	437089
1233	27.4	6.9	1.9	chr10	46156531	46157001	(87640421)	+	MLT2B1	LTR/ERVL	1	552	(2)	437281
1983	22.5	5.9	0.3	chr10	46157064	46157556	(87639866)	C	MLT2B4	LTR/ERVL	(20)	534	1	437282
31	3.3	0.0	0.0	chr10	46223027	46223057	(87574365)	+	(AG)n	Simple_repeat	1	31	(0)	437372
13	21.6	0.0	6.1	chr10	46223077	46223125	(87574297)	+	(CCCAGT)n	Simple_repeat	1	49	(0)	437373
92	16.7	3.7	0.0	chr10	46535268	46535455	(87261967)	+	(TC)n	Simple_repeat	1	195	(0)	437820
1365	27.0	7.1	1.9	chr10	46862623	46863092	(86934330)	+	MLT2B1	LTR/ERVL	1	552	(2)	438378
20	4.2	0.0	0.0	chr10	46863148	46863172	(86934250)	+	(GA)n	Simple_repeat	1	25	(0)	438379
2198	22.0	6.0	0.2	chr10	46863173	46863645	(86933777)	C	MLT2B4	LTR/ERVL	(54)	502	1	438377
3035	16.3	9.3	0.2	chr10	47260935	47261519	(86535903)	+	MER73	LTR/ERVL	1	644	(0)	438951
23	3.7	0.0	0.0	chr10	47296010	47296037	(86501385)	+	(CT)n	Simple_repeat	1	28	(0)	438997
52	2.1	0.0	0.0	chr10	47296038	47296086	(86501336)	+	(CA)n	Simple_repeat	1	49	(0)	438998
1160	16.8	0.1	1.6	chr10	47458610	47458834	(86338588)	+	MLT2B2	LTR/ERVL	354	567	(0)	439180
235	16.7	0.0	0.0	chr10	47458853	47458888	(86338534)	C	MamGypLTR1a	LTR/Gypsy	(686)	98	63	439181
21	0.0	0.0	0.0	chr10	47458905	47458927	(86338495)	+	(CA)n	Simple_repeat	1	23	(0)	439182
49	2.2	0.0	0.0	chr10	47458928	47458973	(86338449)	+	(AG)n	Simple_repeat	1	46	(0)	439183
1570	21.0	18.8	0.4	chr10	47458990	47459518	(86337904)	C	L1MD2	LINE/L1	(10)	6349	5719	439184
1626	20.7	4.3	3.5	chr10	48301369	48301548	(85495874)	+	MLT1A	LTR/ERVL-MaLR	1	175	(199)	440370
60	4.7	0.0	0.0	chr10	48301549	48301615	(85495807)	+	(CTCTCT)n	Simple_repeat	1	67	(0)	440371
1626	20.7	4.3	3.5	chr10	48301616	48301805	(85495617)	+	MLT1A	LTR/ERVL-MaLR	176	374	(0)	440370
37	0.0	0.0	0.0	chr10	48953303	48953334	(84844088)	+	(TC)n	Simple_repeat	1	32	(0)	441252
24	0.0	0.0	0.0	chr10	48953335	48953361	(84844061)	+	(AC)n	Simple_repeat	1	27	(0)	441253
364	38.5	1.3	0.6	chr10	48953382	48953538	(84843884)	C	MIRb	SINE/MIR	(110)	158	1	441247
24	19.9	0.0	0.0	chr10	49163262	49163307	(84634115)	+	(TG)n	Simple_repeat	1	46	(0)	441531
22	0.0	0.0	0.0	chr10	49163307	49163330	(84634092)	+	(GA)n	Simple_repeat	1	24	(0)	441532
32	29.3	1.6	2.3	chr10	49187561	49187693	(84609729)	+	(TCTC)n	Simple_repeat	1	132	(0)	441560
201	36.4	9.0	1.2	chr10	49187908	49188071	(84609351)	C	MIRb	SINE/MIR	(70)	198	21	441561
1389	20.8	4.5	6.9	chr10	49309191	49309536	(84487886)	+	MLT1A0	LTR/ERVL-MaLR	1	337	(28)	441730
204	24.6	2.5	0.0	chr10	49403423	49403934	(84393488)	+	(CTCT)n	Simple_repeat	1	525	(0)	441840
1316	24.6	14.1	0.2	chr10	50022846	50023309	(83774113)	+	L1ME3G	LINE/L1	36	574	(350)	442730
49	0.0	0.0	0.0	chr10	50023348	50023389	(83774033)	+	(TC)n	Simple_repeat	1	42	(0)	442731
1952	14.6	0.0	0.0	chr10	50023392	50023665	(83773757)	C	AluSx1	SINE/Alu	(19)	293	20	442732
39	6.3	0.0	0.0	chr10	50891141	50891190	(82906232)	+	(CA)n	Simple_repeat	1	50	(0)	444017
57	1.9	0.0	0.0	chr10	50891191	50891243	(82906179)	+	(CT)n	Simple_repeat	1	53	(0)	444018
256	30.8	7.2	2.1	chr10	50893586	50893678	(82903744)	C	MIR3	SINE/MIR	(10)	198	101	444026
46	15.3	0.0	0.0	chr10	50893847	50893927	(82903495)	+	(CTCT)n	Simple_repeat	1	81	(0)	444027
41	0.0	0.0	0.0	chr10	50893928	50893962	(82903460)	+	(CA)n	Simple_repeat	1	35	(0)	444028
9690	6.8	2.4	10.2	chr10	59732008	59732977	(74064445)	C	Harlequin-int	LTR/ERV1	(5474)	1422	464	456005
1849	17.6	2.6	2.0	chr10	60879838	60880179	(72917243)	+	MER2	DNA/TcMar-Tigger	2	345	(0)	457770
22	0.0	0.0	0.0	chr10	60880180	60880203	(72917219)	+	(TG)n	Simple_repeat	1	24	(0)	457771
65	5.1	0.0	0.0	chr10	60880203	60880283	(72917139)	+	(GA)n	Simple_repeat	1	81	(0)	457772
199	27.0	13.7	1.6	chr10	60978637	60978700	(72818722)	C	AmnSINE2	SINE/tRNA-Deu	(45)	313	241	457911
818	33.6	8.2	2.5	chr10	61342780	61342959	(72454463)	C	LTR33	LTR/ERVL	(0)	515	309	458438
31	0.0	0.0	0.0	chr10	61342960	61342986	(72454436)	+	(AC)n	Simple_repeat	1	27	(0)	458439
818	33.6	8.2	2.5	chr10	61342987	61343290	(72454132)	C	LTR33	LTR/ERVL	(207)	308	2	458438
72	1.5	1.4	0.0	chr10	61623835	61623903	(72173519)	+	(TC)n	Simple_repeat	1	70	(0)	458827
65	1.7	0.0	0.0	chr10	62564410	62564469	(71232953)	+	(TC)n	Simple_repeat	1	60	(0)	460266
2413	9.2	0.0	0.3	chr10	63305087	63305390	(70492032)	+	AluSc	SINE/Alu	1	303	(6)	461537
1430	18.1	0.4	7.7	chr10	63305391	63305453	(70491969)	+	AluJr	SINE/Alu	219	277	(35)	461536
42	0.0	0.0	0.0	chr10	63305460	63305495	(70491927)	+	(CT)n	Simple_repeat	1	36	(0)	461538
16	0.0	0.0	0.0	chr10	63305513	63305530	(70491892)	+	(CT)n	Simple_repeat	1	18	(0)	461538
574	13.8	1.2	0.0	chr10	63305546	63305625	(70491797)	C	AluJb	SINE/Alu	(90)	222	142	461539
63	0.0	0.0	0.0	chr10	63305630	63305683	(70491739)	+	(GT)n	Simple_repeat	1	54	(0)	461540
1425	17.7	4.0	0.0	chr10	63305784	63306020	(70491402)	C	AluJb	SINE/Alu	(63)	249	3	461541
44	9.7	0.0	0.0	chr10	63692582	63692648	(70104774)	+	(TCTC)n	Simple_repeat	1	67	(0)	462258
36	2.9	0.0	0.0	chr10	63692650	63692684	(70104738)	+	(AC)n	Simple_repeat	1	35	(0)	462259
264	32.3	8.9	4.2	chr10	64574465	64574775	(69222647)	+	L2a	LINE/L2	2825	3152	(274)	463594
204	31.0	12.8	0.8	chr10	67883880	67883996	(65913426)	C	MIR3	SINE/MIR	(46)	162	30	468130
288	33.2	10.8	6.9	chr10	68046480	68046686	(65750736)	C	L2c	LINE/L2	(2)	3385	3159	468408
1954	13.9	2.0	1.4	chr10	68203307	68203601	(65593821)	+	AluJr	SINE/Alu	1	297	(15)	468705
32	3.2	0.0	0.0	chr10	68203690	68203721	(65593701)	+	(CA)n	Simple_repeat	1	32	(0)	468706
24	0.0	0.0	0.0	chr10	68203722	68203747	(65593675)	+	(GA)n	Simple_repeat	1	26	(0)	468707
378	16.1	0.0	0.0	chr10	68203760	68203815	(65593607)	+	Tigger5b	DNA/TcMar-Tigger	417	472	(0)	468708
297	22.0	6.2	7.1	chr10	68203816	68203847	(65593575)	C	MER47C	DNA/TcMar-Tigger	(0)	76	1	468709
220	30.7	6.8	7.7	chr10	68203901	68204266	(65593156)	+	L2c	LINE/L2	3011	3394	(32)	468710
828	14.3	0.0	1.6	chr10	68955457	68955582	(64841840)	+	AluSx3	SINE/Alu	161	284	(27)	470522
194	28.1	3.4	12.3	chr10	68955593	68955722	(64841700)	+	L2c	LINE/L2	3269	3386	(1)	470523
2210	14.1	0.0	0.3	chr10	69089614	69089925	(64707497)	+	AluSx3	SINE/Alu	1	311	(0)	470844
21	5.5	0.0	8.9	chr10	69089926	69089953	(64707469)	+	(AGAA)n	Simple_repeat	1	25	(0)	470845
302	31.4	6.9	0.8	chr10	69734156	69734277	(64063145)	+	MIR1_Amn	SINE/MIR	23	152	(110)	472163
283	22.4	11.4	4.9	chr10	69810190	69810311	(63987111)	+	MER5B	DNA/hAT-Charlie	17	147	(31)	472304
43	2.5	0.0	0.0	chr10	69810348	69810388	(63987034)	+	(GA)n	Simple_repeat	1	41	(0)	472305
49	14.4	1.2	0.0	chr10	69877616	69877699	(63919723)	+	(TC)n	Simple_repeat	1	85	(0)	472427
55	0.0	0.0	0.0	chr10	69877700	69877746	(63919676)	+	(CA)n	Simple_repeat	1	47	(0)	472428
69	0.0	0.0	0.0	chr10	70133099	70133157	(63664265)	+	(AG)n	Simple_repeat	1	59	(0)	472808
18	17.2	0.0	2.4	chr10	70404143	70404204	(63393218)	+	(GCT)n	Simple_repeat	1	60	(0)	473402
59	0.0	0.0	0.0	chr10	70451360	70451409	(63346013)	+	(GA)n	Simple_repeat	1	50	(0)	473490
19	17.5	2.2	0.0	chr10	70451430	70451445	(63345977)	+	(AAT)n	Simple_repeat	1	16	(0)	473491
2294	11.6	0.3	0.0	chr10	70451446	70451756	(63345666)	+	AluSq	SINE/Alu	1	312	(1)	473492
2564	9.7	1.6	0.0	chr10	70558762	70559133	(63238289)	C	MER83	LTR/ERV1	(70)	378	1	473716
1114	25.4	15.8	1.5	chr10	70559176	70559937	(63237485)	C	L2a	LINE/L2	(260)	3166	2273	473715
3229	19.9	3.4	2.5	chr10	70575722	70576429	(63220993)	C	MER72	LTR/ERV1	(0)	722	9	473743
471	26.1	3.2	0.0	chr10	70576435	70576553	(63220869)	+	LTR16B1	LTR/ERVL	309	431	(49)	473742
4718	9.7	1.9	0.0	chr10	70590200	70590821	(63206601)	C	MER41B	LTR/ERV1	(0)	634	1	473772
1643	15.8	4.5	0.4	chr10	70595296	70595548	(63201874)	+	AluJb	SINE/Alu	1	264	(48)	473786
259	28.3	3.9	0.0	chr10	70595749	70595847	(63201575)	C	LTR33	LTR/ERVL	(412)	103	1	473785
231	32.9	0.0	5.8	chr10	70670890	70670976	(63126446)	C	MIR1_Amn	SINE/MIR	(78)	152	71	473919
73	5.7	2.2	0.0	chr10	70671018	70671109	(63126313)	+	(TC)n	Simple_repeat	1	94	(0)	473920
35	0.0	0.0	0.0	chr10	70671110	70671147	(63126275)	+	(AC)n	Simple_repeat	1	38	(0)	473921
908	19.5	0.6	3.5	chr10	70671216	70671384	(63126038)	C	AluJb	SINE/Alu	(15)	297	134	473922
18	27.3	0.0	7.5	chr10	70744890	70744982	(63052440)	+	GA-rich	Low_complexity	1	93	(0)	474043
383	28.9	7.7	1.5	chr10	70744983	70745180	(63052242)	C	MIRb	SINE/MIR	(3)	265	57	474044
27	6.1	0.0	0.0	chr10	70813880	70813914	(62983508)	+	(TC)n	Simple_repeat	1	35	(0)	474154
54	0.0	0.0	0.0	chr10	70813915	70813960	(62983462)	+	(CA)n	Simple_repeat	1	46	(0)	474155
59	34.6	2.7	1.0	chr10	70913229	70913528	(62883894)	+	GA-rich	Low_complexity	1	305	(0)	474320
372	24.5	16.5	1.3	chr10	71345198	71345346	(62452076)	C	MLT1G1	LTR/ERVL-MaLR	(6)	563	388	475051
17	0.0	4.8	0.0	chr10	71345356	71345376	(62452046)	+	(CT)n	Simple_repeat	1	22	(0)	475052
649	24.1	7.5	0.1	chr10	71345388	71345569	(62451853)	C	MLT1G1	LTR/ERVL-MaLR	(336)	255	44	475051
44	0.0	0.0	0.0	chr10	71515358	71515395	(62282027)	+	(TC)n	Simple_repeat	1	38	(0)	475431
29	5.7	0.0	0.0	chr10	71515396	71515432	(62281990)	+	(AC)n	Simple_repeat	1	37	(0)	475432
1737	15.5	10.8	1.5	chr10	71635763	71636090	(62161332)	C	MLT1A0	LTR/ERVL-MaLR	(3)	362	1	475649
43	12.6	1.4	0.0	chr10	71658244	71658313	(62139109)	+	(AG)n	Simple_repeat	1	71	(0)	475686
49	4.1	0.0	0.0	chr10	71667360	71667410	(62130012)	+	(GT)n	Simple_repeat	1	51	(0)	475704
356	31.0	1.7	0.0	chr10	71753872	71753984	(62043438)	C	MIRb	SINE/MIR	(34)	234	120	475841
1425	15.4	7.7	4.6	chr10	71867686	71868011	(61929411)	+	MER44A	DNA/TcMar-Tigger	1	337	(2)	476058
319	25.4	4.5	4.7	chr10	71888523	71888752	(61908670)	C	L1ME3B	LINE/L1	(60)	6182	5932	476115
35	6.7	2.1	0.0	chr10	71889322	71889368	(61908054)	+	(CT)n	Simple_repeat	1	48	(0)	476116
19443	13.7	4.8	5.6	chr10	71939839	71943821	(61853601)	+	Harlequin-int	LTR/ERV1	1	3949	(2947)	476248
4916	17.0	1.4	2.2	chr10	71961542	71962659	(61834763)	C	HERVFH21-int	LTR/ERV1	(5148)	1381	341	476260
427	20.4	0.0	3.6	chr10	71962690	71962801	(61834621)	C	HERVFH21-int	LTR/ERV1	(6421)	108	1	476260
1023	20.6	21.2	4.8	chr10	71962802	71963199	(61834223)	C	LTR21A	LTR/ERV1	(0)	481	1	476260
18	15.0	0.0	0.0	chr10	72027510	72027539	(61769883)	+	(GT)n	Simple_repeat	1	30	(0)	476380
15	0.0	0.0	0.0	chr10	72027666	72027682	(61769740)	+	(AG)n	Simple_repeat	1	17	(0)	476381
22	3.9	0.0	0.0	chr10	72055820	72055846	(61741576)	+	(GA)n	Simple_repeat	1	27	(0)	476449
26	3.1	3.0	0.0	chr10	72055897	72055929	(61741493)	+	(TGTT)n	Simple_repeat	1	34	(0)	476450
364	13.9	10.9	2.8	chr10	72055935	72056056	(61741366)	C	MIR3	SINE/MIR	(24)	206	69	476451
12	28.0	1.6	4.8	chr10	72096181	72096242	(61701180)	+	GA-rich	Low_complexity	1	63	(0)	476519
648	15.7	1.9	1.9	chr10	72276704	72276811	(61520611)	+	FLAM_A	SINE/Alu	21	128	(14)	476924
193	28.8	1.5	8.3	chr10	72276824	72276895	(61520527)	+	MIR3	SINE/MIR	113	179	(29)	476925
246	29.6	8.8	2.3	chr10	72320812	72320939	(61476483)	+	MIRc	SINE/MIR	85	221	(47)	477045
31	0.0	0.0	0.0	chr10	72693174	72693200	(61104222)	+	(GT)n	Simple_repeat	1	27	(0)	477845
20	10.5	0.0	0.0	chr10	72693201	72693229	(61104193)	+	(GA)n	Simple_repeat	1	29	(0)	477846
3328	13.6	3.4	9.4	chr10	73212575	73212776	(60584646)	C	L1PB4	LINE/L1	(467)	5689	5485	478869
8749	15.8	3.8	2.3	chr10	73212772	73212833	(60584589)	C	L1P4	LINE/L1	(756)	5390	5334	478871
31	9.5	0.0	0.0	chr10	73212834	73212878	(60584544)	+	(TC)n	Simple_repeat	1	45	(0)	478872
1959	12.7	0.0	1.5	chr10	73212879	73213146	(60584276)	C	AluJb	SINE/Alu	(48)	264	1	478873
1183	17.5	4.2	1.0	chr10	73366261	73366617	(60430805)	+	L1MB7	LINE/L1	5154	5520	(658)	479162
2886	16.5	8.4	0.0	chr10	73366623	73367168	(60430254)	C	LTR31	LTR/ERV1	(15)	604	9	479163
3521	17.0	2.8	7.0	chr10	73742860	73743582	(60053840)	C	LTR8	LTR/ERV1	(0)	691	1	479874
273	25.6	3.5	4.7	chr10	73743583	73743617	(60053805)	+	L2a	LINE/L2	3392	3426	(0)	479873
1592	9.1	0.5	1.4	chr10	73932648	73932856	(59864566)	+	AluSx1	SINE/Alu	88	294	(18)	480195
16	14.4	2.5	2.4	chr10	73998373	73998412	(59799010)	+	G-rich	Low_complexity	1	41	(0)	480357
647	29.4	4.3	2.6	chr10	73998479	73998705	(59798717)	+	MIRb	SINE/MIR	30	260	(8)	480358
25	15.1	0.0	2.2	chr10	74171765	74171810	(59625612)	+	(CT)n	Simple_repeat	1	46	(0)	480696
38	0.0	0.0	0.0	chr10	74171811	74171843	(59625579)	+	(TG)n	Simple_repeat	1	33	(0)	480697
17	18.2	0.0	4.9	chr10	74308843	74308889	(59488533)	+	(CT)n	Simple_repeat	1	44	(0)	480989
12	11.1	6.9	0.0	chr10	74522948	74522976	(59274446)	+	(CTTCC)n	Simple_repeat	1	31	(0)	481334
488	31.4	6.4	5.1	chr10	74523031	74523245	(59274177)	+	MIRb	SINE/MIR	50	267	(1)	481335
1752	17.1	3.2	0.7	chr10	74665460	74665734	(59131688)	+	AluJr4	SINE/Alu	1	282	(30)	481572
54	0.0	0.0	0.0	chr10	74665737	74665782	(59131640)	+	(GA)n	Simple_repeat	1	46	(0)	481573
23	17.8	0.0	6.2	chr10	74665784	74665848	(59131574)	+	GA-rich	Low_complexity	1	65	(0)	481574
385	32.6	11.9	5.6	chr10	74787445	74787622	(59009800)	C	MIRb	SINE/MIR	(60)	208	1	481818
2319	6.9	1.4	0.0	chr10	75110824	75111112	(58686310)	C	AluSq2	SINE/Alu	(20)	293	1	482443
295	35.6	12.9	0.9	chr10	75111113	75111193	(58686229)	+	MIRb	SINE/MIR	176	259	(9)	482442
1791	24.1	10.2	6.2	chr10	75156311	75157208	(58640214)	+	L1MC4	LINE/L1	7198	8041	(1)	482547
21	16.6	2.4	0.0	chr10	75157229	75157269	(58640153)	+	GA-rich	Low_complexity	1	42	(0)	482548
1333	26.6	14.6	1.4	chr10	75157289	75157877	(58639545)	C	L2a	LINE/L2	(1630)	1789	1104	482540
20	24.1	3.6	0.0	chr10	75402683	75402737	(58394685)	+	GA-rich	Low_complexity	1	57	(0)	483056
9349	3.8	0.2	20.6	chr10	75749629	75751367	(58046055)	C	SVA_B	Retroposon/SVA	(0)	1383	1	483541
1420	19.1	1.7	5.9	chr10	77215680	77215878	(56581544)	+	MLT1A	LTR/ERVL-MaLR	1	188	(186)	485537
49	0.0	5.8	0.0	chr10	77215879	77215930	(56581492)	+	(TC)n	Simple_repeat	1	55	(0)	485538
1420	19.1	1.7	5.9	chr10	77215931	77216036	(56581386)	+	MLT1A	LTR/ERVL-MaLR	189	293	(81)	485537
1636	16.7	3.7	3.4	chr10	77216042	77216363	(56581059)	+	L1MB8	LINE/L1	5855	6177	(1)	485539
119	26.4	0.8	3.4	chr10	77506487	77506571	(56290851)	+	GA-rich	Low_complexity	1	83	(0)	486048
30	0.0	0.0	0.0	chr10	77506572	77506597	(56290825)	+	(AG)n	Simple_repeat	1	26	(0)	486049
119	26.4	0.8	3.4	chr10	77506598	77506840	(56290582)	+	GA-rich	Low_complexity	84	320	(0)	486050
37	0.0	0.0	0.0	chr10	77506841	77506872	(56290550)	+	(GT)n	Simple_repeat	1	32	(0)	486051
119	26.4	0.8	3.4	chr10	77506873	77506927	(56290495)	+	GA-rich	Low_complexity	321	374	(0)	486052
2378	6.9	1.4	0.0	chr10	77581316	77581604	(56215818)	C	AluY	SINE/Alu	(18)	293	1	486199
1130	27.1	5.3	10.4	chr10	77663248	77663563	(56133859)	C	L1MC5a	LINE/L1	(1905)	872	561	486357
48	0.0	0.0	0.0	chr10	77663564	77663604	(56133818)	+	(AC)n	Simple_repeat	1	41	(0)	486358
1130	27.1	5.3	10.4	chr10	77663605	77663922	(56133500)	C	L1MC5a	LINE/L1	(2217)	560	272	486357
17	16.3	0.0	0.0	chr10	78657192	78657226	(55140196)	+	GA-rich	Low_complexity	1	35	(0)	488213
15	0.0	0.0	0.0	chr10	79031430	79031446	(54765976)	+	(AG)n	Simple_repeat	1	17	(0)	488924
316	33.0	10.7	0.0	chr10	79031447	79031555	(54765867)	+	MIRb	SINE/MIR	113	234	(34)	488925
2860	18.3	4.1	2.0	chr10	79038776	79038853	(54758569)	+	MER68	LTR/ERVL	1	80	(483)	488942
1402	21.3	6.7	8.6	chr10	79038854	79039294	(54758128)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	488943
16	23.6	3.3	3.2	chr10	79068720	79068780	(54728642)	+	A-rich	Low_complexity	1	63	(0)	488998
17	6.8	6.5	0.0	chr10	79068813	79068843	(54728579)	+	(GCG)n	Simple_repeat	1	33	(0)	488999
26	24.4	5.0	1.9	chr10	79069020	79069120	(54728302)	+	(AGCG)n	Simple_repeat	1	106	(0)	489000
2206	9.9	0.3	0.0	chr10	79093345	79093626	(54703796)	C	AluSx1	SINE/Alu	(29)	283	1	489043
431	29.8	8.5	8.1	chr10	79093627	79093765	(54703657)	C	MIRb	SINE/MIR	(113)	155	4	489041
255	30.1	18.4	0.0	chr10	79413652	79413744	(54383678)	+	MIR3	SINE/MIR	32	145	(63)	489570
19	14.9	0.0	0.0	chr10	79413749	79413779	(54383643)	+	(TG)n	Simple_repeat	1	31	(0)	489571
29	0.0	0.0	0.0	chr10	79413780	79413804	(54383618)	+	(GA)n	Simple_repeat	1	25	(0)	489572
35	0.0	0.0	0.0	chr10	79446195	79446224	(54351198)	+	(GT)n	Simple_repeat	1	30	(0)	489641
1438	26.6	6.9	1.5	chr10	79635675	79636144	(54161278)	+	MLT2B1	LTR/ERVL	1	552	(2)	489940
38	0.0	0.0	0.0	chr10	79636207	79636239	(54161183)	+	(AG)n	Simple_repeat	1	33	(0)	489941
2170	21.8	6.1	0.2	chr10	79636240	79636699	(54160723)	C	MLT2B4	LTR/ERVL	(67)	489	1	489942
2064	17.3	3.3	1.7	chr10	80187154	80187511	(53609911)	+	MLT1A0	LTR/ERVL-MaLR	1	364	(1)	490822
29	0.0	0.0	0.0	chr10	80187546	80187570	(53609852)	+	(CA)n	Simple_repeat	1	25	(0)	490823
72	0.0	0.0	0.0	chr10	80511712	80511772	(53285650)	+	(CT)n	Simple_repeat	1	61	(0)	491335
20	8.6	5.3	0.0	chr10	80511777	80511814	(53285608)	+	(TTTCTC)n	Simple_repeat	1	40	(0)	491336
671	24.6	0.0	0.8	chr10	80511816	80511949	(53285473)	C	FLAM_A	SINE/Alu	(9)	133	1	491337
309	18.8	1.5	0.0	chr10	83877879	83877942	(49919480)	+	MLT1F1	LTR/ERVL-MaLR	3	67	(481)	495962
37	2.4	2.3	2.2	chr10	83877944	83877987	(49919435)	+	(CT)n	Simple_repeat	1	45	(0)	495963
1254	20.9	5.0	4.2	chr10	83877993	83878347	(49919075)	+	MLT1F1	LTR/ERVL-MaLR	208	565	(4)	495962
1532	20.0	5.5	2.9	chr10	83911604	83911809	(49885613)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	189	496007
48	4.1	0.0	0.0	chr10	83911810	83911859	(49885563)	+	(GA)n	Simple_repeat	1	50	(0)	496008
1532	20.0	5.5	2.9	chr10	83911860	83911992	(49885430)	C	MLT1B	LTR/ERVL-MaLR	(202)	188	42	496007
2209	11.9	0.3	2.5	chr10	83912021	83912339	(49885083)	C	AluSp	SINE/Alu	(1)	312	1	496009
34	0.0	0.0	0.0	chr10	84512368	84512396	(49285026)	+	(GT)n	Simple_repeat	1	29	(0)	496981
23	0.0	3.6	0.0	chr10	84512397	84512424	(49284998)	+	(AG)n	Simple_repeat	1	29	(0)	496982
36	0.0	0.0	0.0	chr10	85667317	85667347	(48130075)	+	(AG)n	Simple_repeat	1	31	(0)	498433
607	28.0	10.8	0.0	chr10	85667431	85667637	(48129785)	C	MIR	SINE/MIR	(15)	247	16	498434
2168	11.3	0.0	0.0	chr10	86055479	86055762	(47741660)	+	AluSz	SINE/Alu	19	302	(10)	498915
1771	19.2	0.8	8.8	chr10	86055763	86055813	(47741609)	+	MLT1A	LTR/ERVL-MaLR	157	190	(184)	498914
30	0.0	0.0	0.0	chr10	86055814	86055839	(47741583)	+	(TC)n	Simple_repeat	1	26	(0)	498916
1771	19.2	0.8	8.8	chr10	86055840	86056018	(47741404)	+	MLT1A	LTR/ERVL-MaLR	191	366	(8)	498914
28	0.0	0.0	0.0	chr10	86573518	86573548	(47223874)	+	(TC)n	Simple_repeat	1	31	(0)	499764
43	0.0	0.0	0.0	chr10	86573549	86573585	(47223837)	+	(CA)n	Simple_repeat	1	37	(0)	499765
2287	12.2	0.0	0.0	chr10	86573637	86573948	(47223474)	C	AluSz	SINE/Alu	(0)	312	1	499766
254	28.1	10.1	1.1	chr10	86770496	86770585	(47026837)	+	LTR78B	LTR/ERV1	770	868	(428)	500114
494	28.5	15.5	2.9	chr10	86770628	86770869	(47026553)	+	LTR78B	LTR/ERV1	997	1274	(22)	500114
2712	5.3	0.0	3.1	chr10	87202966	87203284	(46594138)	+	AluY	SINE/Alu	3	311	(0)	500920
1645	22.4	10.7	3.7	chr10	87203285	87203321	(46594101)	+	L1M5	LINE/L1	4586	4616	(1530)	500919
44	0.0	0.0	0.0	chr10	87203330	87203367	(46594055)	+	(TG)n	Simple_repeat	1	38	(0)	500921
23	0.0	0.0	0.0	chr10	87203368	87203392	(46594030)	+	(AG)n	Simple_repeat	1	25	(0)	500922
403	28.4	4.5	0.7	chr10	87203523	87203671	(46593751)	+	LTR41B	LTR/ERVL	1	155	(603)	500923
1544	19.2	8.0	8.7	chr10	89293495	89293674	(44503748)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	191	504163
43	0.0	0.0	2.4	chr10	89293675	89293715	(44503707)	+	(GA)n	Simple_repeat	1	41	(0)	504164
1544	19.2	8.0	8.7	chr10	89293716	89293927	(44503495)	C	MLT1B	LTR/ERVL-MaLR	(200)	190	2	504163
16	0.0	0.0	0.0	chr10	89374344	89374361	(44423061)	+	(CT)n	Simple_repeat	1	18	(0)	504277
53	0.0	0.0	0.0	chr10	91123628	91123672	(42673750)	+	(TG)n	Simple_repeat	1	45	(0)	506835
2457	11.8	7.8	4.4	chr10	91147488	91147896	(42649526)	C	MSTA	LTR/ERVL-MaLR	(4)	424	1	506881
1387	26.7	10.0	3.4	chr10	91147897	91148311	(42649111)	+	MLT1H	LTR/ERVL-MaLR	97	549	(0)	506880
55	3.7	0.0	0.0	chr10	91609148	91609203	(42188219)	+	(TC)n	Simple_repeat	1	56	(0)	507574
35	12.3	0.0	0.0	chr10	91609204	91609249	(42188173)	+	(AC)n	Simple_repeat	1	46	(0)	507575
29	6.1	0.0	0.0	chr10	91909576	91909609	(41887813)	+	(TC)n	Simple_repeat	1	34	(0)	508070
1411	14.2	0.4	12.3	chr10	92566075	92566383	(41231039)	+	AluJb	SINE/Alu	2	273	(39)	509403
31	3.3	0.0	0.0	chr10	92566384	92566414	(41231008)	+	(CT)n	Simple_repeat	1	31	(0)	509404
23	0.0	3.6	0.0	chr10	92566415	92566442	(41230980)	+	(AC)n	Simple_repeat	1	29	(0)	509405
2298	8.1	5.5	0.0	chr10	92566457	92566800	(41230622)	+	L1MA2	LINE/L1	5841	6204	(100)	509406
784	24.3	0.0	0.0	chr10	92735283	92735461	(41061961)	C	AluJb	SINE/Alu	(0)	312	130	509777
38	2.8	0.0	0.0	chr10	92735475	92735511	(41061911)	+	(AC)n	Simple_repeat	1	37	(0)	509778
29	3.0	0.0	0.0	chr10	92735512	92735545	(41061877)	+	(GA)n	Simple_repeat	1	34	(0)	509779
825	10.8	12.7	5.8	chr10	92735547	92735685	(41061737)	+	FRAM	SINE/Alu	2	151	(25)	509780
16	0.0	8.0	0.0	chr10	92735686	92735710	(41061712)	+	(TAA)n	Simple_repeat	1	27	(0)	509781
3219	19.6	2.0	0.6	chr10	92828881	92829516	(40967906)	+	LTR9D	LTR/ERV1	1	645	(0)	509981
4348	9.8	5.0	0.2	chr10	92829620	92830222	(40967200)	+	MER41B	LTR/ERV1	1	634	(0)	509982
3657	13.8	0.8	3.5	chr10	92972208	92972816	(40824606)	C	MER41E	LTR/ERV1	(0)	595	3	510242
33	0.0	0.0	0.0	chr10	93564813	93564840	(40232582)	+	(TC)n	Simple_repeat	1	28	(0)	511381
15	5.6	0.0	0.0	chr10	93564841	93564859	(40232563)	+	(AC)n	Simple_repeat	1	19	(0)	511382
31	0.0	0.0	0.0	chr10	95066120	95066153	(38731269)	+	(GA)n	Simple_repeat	1	34	(0)	513761
42	0.0	0.0	0.0	chr10	95066154	95066189	(38731233)	+	(GT)n	Simple_repeat	1	36	(0)	513762
48	0.0	0.0	0.0	chr10	95479958	95479998	(38317424)	+	(CT)n	Simple_repeat	1	41	(0)	514341
236	29.8	3.5	0.0	chr10	95479999	95480082	(38317340)	+	MER113	DNA/hAT-Charlie	103	189	(332)	514342
2015	10.6	12.7	0.9	chr10	96737354	96737687	(37059735)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	516539
3517	15.5	4.7	6.2	chr10	96737688	96737946	(37059476)	C	L1MC2	LINE/L1	(398)	5946	5689	516538
56	0.0	0.0	0.0	chr10	98045352	98045399	(35752023)	+	(GA)n	Simple_repeat	1	48	(0)	519255
191	12.9	3.1	0.0	chr10	98286935	98286965	(35510457)	C	MER5B	DNA/hAT-Charlie	(0)	178	147	519656
2626	19.5	4.0	7.5	chr10	98287059	98287098	(35510324)	C	MLT2B3	LTR/ERVL	(2)	552	515	519657
42	4.7	0.0	0.0	chr10	98287099	98287143	(35510279)	+	(CT)n	Simple_repeat	1	45	(0)	519658
2626	19.5	4.0	7.5	chr10	98287144	98287674	(35509748)	C	MLT2B3	LTR/ERVL	(40)	514	2	519657
19	19.9	7.4	0.0	chr10	98467481	98467534	(35329888)	+	GA-rich	Low_complexity	1	58	(0)	519973
2943	20.3	8.7	0.8	chr10	98777998	98778253	(35019169)	C	MER54A	LTR/ERVL	(259)	642	378	520466
46	2.3	0.0	0.0	chr10	98778254	98778297	(35019125)	+	(GA)n	Simple_repeat	1	44	(0)	520467
2943	18.3	8.7	0.0	chr10	98778298	98778690	(35018732)	C	MER54A	LTR/ERVL	(467)	434	2	520466
1244	21.9	12.3	10.0	chr10	99906442	99906909	(33890513)	+	MLT1F	LTR/ERVL-MaLR	67	546	(2)	522301
51	22.2	1.6	0.0	chr10	100087898	100088018	(33709404)	+	GA-rich	Low_complexity	1	123	(0)	522705
2563	13.2	10.4	7.3	chr10	100125203	100125345	(33672077)	C	PRIMA4_LTR	LTR/ERV1	(0)	594	457	522790
2061	11.8	6.3	3.0	chr10	100125346	100125713	(33671709)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	522791
37	0.0	0.0	0.0	chr10	100371705	100371736	(33425686)	+	(GA)n	Simple_repeat	1	32	(0)	523224
910	10.7	0.0	0.8	chr10	100371786	100371907	(33425515)	C	AluJo	SINE/Alu	(190)	122	2	523225
54	2.0	0.0	0.0	chr10	100568345	100568395	(33229027)	+	(AC)n	Simple_repeat	1	51	(0)	523575
25	0.0	0.0	0.0	chr10	100568396	100568423	(33228999)	+	(GA)n	Simple_repeat	1	28	(0)	523576
398	20.5	16.6	2.1	chr10	100568529	100568654	(33228768)	C	MIR3	SINE/MIR	(52)	156	22	523577
1110	14.3	1.3	18.6	chr10	100676414	100676525	(33120897)	+	MER30	DNA/hAT-Charlie	119	227	(3)	523780
22	0.0	0.0	0.0	chr10	100676605	100676628	(33120794)	+	(TC)n	Simple_repeat	1	24	(0)	523782
49	0.0	0.0	0.0	chr10	100676629	100676670	(33120752)	+	(TG)n	Simple_repeat	1	42	(0)	523783
21	4.0	0.0	0.0	chr10	101442263	101442288	(32355134)	+	(TC)n	Simple_repeat	1	26	(0)	525127
31	3.3	0.0	0.0	chr10	101442289	101442319	(32355103)	+	(TG)n	Simple_repeat	1	31	(0)	525128
5876	13.6	6.5	2.4	chr10	102057519	102058483	(31738939)	+	LTR13	LTR/ERVK	1	1007	(0)	526193
19	19.2	0.0	0.0	chr10	102114877	102114918	(31682504)	+	(CACTCA)n	Simple_repeat	1	42	(0)	526320
21	23.5	1.5	2.9	chr10	102114921	102114997	(31682425)	+	(CTCC)n	Simple_repeat	1	75	(0)	526321
17	11.3	0.0	0.0	chr10	102115079	102115107	(31682315)	+	(AGGG)n	Simple_repeat	1	29	(0)	526322
205	38.3	1.6	12.1	chr10	102393796	102393877	(31403545)	+	L3	LINE/CR1	4013	4084	(15)	526849
33	8.9	0.0	2.0	chr10	102432858	102432908	(31364514)	+	(TC)n	Simple_repeat	1	51	(0)	526899
2556	7.1	0.0	0.0	chr10	102432914	102433224	(31364198)	C	AluSx3	SINE/Alu	(0)	311	1	526900
408	25.2	3.4	1.7	chr10	104157544	104157713	(29639709)	+	L1MC4	LINE/L1	6404	6584	(1458)	530259
47	0.0	0.0	0.0	chr10	104157737	104157776	(29639646)	+	(TG)n	Simple_repeat	1	40	(0)	530260
18	0.0	0.0	0.0	chr10	104157777	104157795	(29639627)	+	(GA)n	Simple_repeat	1	19	(0)	530261
1848	25.3	10.0	2.2	chr10	104157796	104158850	(29638572)	+	L1MC4	LINE/L1	6698	7901	(141)	530259
273	38.0	6.4	6.2	chr10	104349616	104350012	(29447410)	C	L2b	LINE/L2	(63)	3312	2917	530571
780	27.2	8.1	7.5	chr10	104479508	104479810	(29317612)	+	MLT1K	LTR/ERVL-MaLR	146	430	(165)	530768
115	0.0	0.0	0.0	chr10	104479811	104479908	(29317514)	+	(GA)n	Simple_repeat	1	98	(0)	530769
780	27.2	8.1	7.5	chr10	104479909	104480045	(29317377)	+	MLT1K	LTR/ERVL-MaLR	431	589	(6)	530768
501	22.8	10.4	4.3	chr10	109890264	109890451	(23906971)	+	Charlie7a	DNA/hAT-Charlie	3	203	(69)	538544
51	0.0	0.0	0.0	chr10	109890551	109890594	(23906828)	+	(TG)n	Simple_repeat	1	44	(0)	538545
32	7.5	0.0	0.0	chr10	109890595	109890637	(23906785)	+	(AG)n	Simple_repeat	1	43	(0)	538546
62	5.9	0.0	0.0	chr10	110040916	110040986	(23756436)	+	(CT)n	Simple_repeat	1	71	(0)	538825
342	33.9	5.1	5.1	chr10	110041084	110041357	(23756065)	C	L2	LINE/L2	(925)	2494	2221	538824
258	29.5	9.5	0.0	chr10	110079308	110079402	(23718020)	C	HAL1ME	LINE/L1	(18)	2447	2343	538879
31	0.0	0.0	0.0	chr10	110079428	110079461	(23717961)	+	(GA)n	Simple_repeat	1	34	(0)	538880
48	0.0	0.0	0.0	chr10	110079462	110079502	(23717920)	+	(GT)n	Simple_repeat	1	41	(0)	538881
263	25.0	3.7	7.1	chr10	110079546	110079557	(23717865)	C	L1ME4b	LINE/L1	(341)	5838	5830	538882
2214	9.5	5.0	0.0	chr10	110079558	110079840	(23717582)	C	AluSz	SINE/Alu	(14)	298	1	538883
30	19.3	3.5	2.2	chr10	110919488	110919573	(22877849)	+	G-rich	Low_complexity	1	89	(0)	540372
1857	23.7	10.0	2.8	chr10	112022114	112022310	(21775112)	+	MLT1F	LTR/ERVL-MaLR	1	189	(359)	542026
34	5.5	0.0	0.0	chr10	112022311	112022348	(21775074)	+	(TC)n	Simple_repeat	1	38	(0)	542027
1857	23.7	10.0	2.8	chr10	112022349	112022657	(21774765)	+	MLT1F	LTR/ERVL-MaLR	190	548	(0)	542026
16	25.6	3.4	1.6	chr10	112951983	112952041	(20845381)	+	(CTCT)n	Simple_repeat	1	61	(0)	543552
27	0.0	0.0	0.0	chr10	113073100	113073129	(20724293)	+	(GT)n	Simple_repeat	1	30	(0)	543740
38	4.9	0.0	0.0	chr10	113073130	113073171	(20724251)	+	(GA)n	Simple_repeat	1	42	(0)	543741
105	1.0	1.0	0.0	chr10	113117366	113117462	(20679960)	+	(TC)n	Simple_repeat	1	98	(0)	543808
213	21.9	10.9	1.2	chr10	117896311	117896393	(15901029)	C	L2a	LINE/L2	(102)	3324	3233	551252
17	37.4	1.0	2.0	chr10	117896540	117896650	(15900772)	+	A-rich	Low_complexity	1	109	(0)	551253
19	33.6	2.1	1.1	chr10	117896555	117896647	(15900775)	+	GA-rich	Low_complexity	1	95	(0)	551254
436	28.6	0.0	0.0	chr10	117896651	117896755	(15900667)	C	MLT1K	LTR/ERVL-MaLR	(292)	303	199	551255
29	0.0	0.0	0.0	chr10	119275588	119275612	(14521810)	+	(CT)n	Simple_repeat	1	25	(0)	553601
40	0.0	0.0	0.0	chr10	119275614	119275647	(14521775)	+	(CA)n	Simple_repeat	1	34	(0)	553602
17	3.8	0.0	6.5	chr10	119335096	119335126	(14462296)	+	(TGCC)n	Simple_repeat	1	31	(0)	553715
56	5.2	0.0	0.0	chr10	119335130	119335190	(14462232)	+	(CT)n	Simple_repeat	1	61	(0)	553716
17	9.9	0.0	5.4	chr10	119335202	119335238	(14462184)	+	(TCTT)n	Simple_repeat	1	37	(0)	553717
465	27.0	11.2	0.0	chr10	119335245	119335355	(14462067)	C	FLAM_A	SINE/Alu	(17)	125	1	553718
15	4.9	0.0	4.3	chr10	119691110	119691132	(14106290)	+	(GA)n	Simple_repeat	1	23	(0)	554388
2112	7.2	0.0	1.6	chr10	119785287	119785535	(14011887)	C	AluSc8	SINE/Alu	(13)	298	54	554598
51	0.0	0.0	0.0	chr10	119785536	119785579	(14011843)	+	(GA)n	Simple_repeat	1	44	(0)	554599
1929	15.8	0.0	1.8	chr10	119785594	119785878	(14011544)	+	AluJr	SINE/Alu	21	300	(12)	554600
5896	15.7	3.0	1.9	chr10	120536018	120537846	(13259576)	+	L1MA9	LINE/L1	4455	6310	(2)	555810
72	0.0	0.0	0.0	chr10	120537993	120538053	(13259369)	+	(TC)n	Simple_repeat	1	61	(0)	555811
29	0.0	0.0	0.0	chr10	120538054	120538085	(13259337)	+	(GT)n	Simple_repeat	1	32	(0)	555812
39	0.0	2.7	0.0	chr10	125356114	125356150	(8441272)	+	(GA)n	Simple_repeat	1	38	(0)	563396
287	29.9	8.0	1.6	chr10	125356266	125356394	(8441028)	+	MIR1_Amn	SINE/MIR	35	172	(58)	563397
21	0.0	3.0	5.9	chr10	126202490	126202522	(7594900)	+	(CT)n	Simple_repeat	1	34	(0)	564553
7894	6.8	1.5	1.8	chr10	133304589	133305598	(491824)	+	LTR13	LTR/ERVK	1	1007	(0)	572360
7951	7.1	1.7	0.1	chr10	133313696	133314686	(482736)	+	LTR13	LTR/ERVK	1	1007	(0)	572368
7191	10.1	3.0	1.0	chr10	133437623	133438609	(358813)	+	LTR13	LTR/ERVK	1	1007	(0)	572525
4274	14.7	6.0	2.5	chr11	350712	351583	(134735039)	C	MER41-int	LTR/ERV1	(4954)	992	1	573310
4069	8.4	1.4	2.1	chr11	352134	352592	(134734030)	C	MER41A	LTR/ERV1	(99)	455	1	573310
2468	9.4	6.4	0.0	chr11	352761	353111	(134733511)	+	MER51B	LTR/ERV1	1	375	(2)	573314
572	10.6	0.0	0.0	chr11	355601	355685	(134730937)	C	MER41A	LTR/ERV1	(463)	91	7	573319
255	28.7	6.3	1.4	chr11	355690	355901	(134730721)	C	LTR40b	LTR/ERVL	(37)	425	203	573320
7658	4.7	3.3	0.3	chr11	573667	574603	(134512019)	+	LTR13A	LTR/ERVK	1	966	(0)	573581
354	31.5	16.3	2.2	chr11	574604	574965	(134511657)	+	L2	LINE/L2	1810	2256	(1163)	573580
18	6.2	2.5	7.3	chr11	747424	747463	(134339159)	+	(GCC)n	Simple_repeat	1	41	(0)	573885
2149	8.8	0.3	4.2	chr11	765530	765835	(134320787)	C	AluSg7	SINE/Alu	(15)	294	1	573922
230	34.9	5.6	0.0	chr11	1356141	1356292	(133730330)	C	L1M1	LINE/L1	(1451)	4695	4535	574523
25	14.7	2.2	0.0	chr11	1922808	1922852	(133163770)	+	(CT)n	Simple_repeat	1	46	(0)	575250
21	18.1	0.0	0.0	chr11	1923001	1923038	(133163584)	+	(CT)n	Simple_repeat	1	38	(0)	575251
8302	5.9	0.2	0.5	chr11	2285884	2286892	(132799730)	C	LTR13	LTR/ERVK	(0)	1007	2	575633
112	8.1	1.7	2.2	chr11	3216843	3217021	(131869601)	+	(TTCT)n	Simple_repeat	1	182	(0)	576734
59	4.8	0.0	0.0	chr11	3217022	3217085	(131869537)	+	(TC)n	Simple_repeat	1	64	(0)	576735
29	19.0	0.0	0.0	chr11	3443569	3443622	(131643000)	+	GA-rich	Low_complexity	1	54	(0)	577042
227	20.6	6.7	4.9	chr11	3466501	3466602	(131620020)	+	SVA_D	Retroposon/SVA	2	105	(1281)	577079
4517	4.9	1.1	0.0	chr11	3509348	3509899	(131576723)	C	LTR6B	LTR/ERV1	(0)	558	1	577132
2298	11.1	0.0	0.3	chr11	3509900	3510216	(131576406)	C	HERVS71-int	LTR/ERV1	(69)	8909	8594	577133
1127	18.4	18.5	0.0	chr11	3702009	3702242	(131384380)	+	AluSz	SINE/Alu	1	287	(25)	577483
34	16.1	2.8	1.4	chr11	3702243	3702313	(131384309)	+	(CA)n	Simple_repeat	1	73	(0)	577484
66	0.0	0.0	0.0	chr11	3702314	3702369	(131384253)	+	(CT)n	Simple_repeat	1	56	(0)	577485
6583	11.9	2.6	1.5	chr11	4492741	4493736	(130592886)	C	LTR13	LTR/ERVK	(0)	1007	1	578870
48	4.2	0.0	0.0	chr11	4795822	4795871	(130290751)	+	(GA)n	Simple_repeat	1	50	(0)	579237
2290	9.2	0.0	0.7	chr11	4986512	4986832	(130099790)	C	AluSx1	SINE/Alu	(0)	312	1	579472
207	31.4	0.0	0.0	chr11	4986840	4986890	(130099732)	C	MIRc	SINE/MIR	(180)	88	38	579473
73	2.9	0.0	0.0	chr11	4986906	4986976	(130099646)	+	(TC)n	Simple_repeat	1	71	(0)	579474
357	10.4	0.0	0.0	chr11	4986977	4987024	(130099598)	C	AluSp	SINE/Alu	(18)	295	248	579475
1148	12.1	0.6	0.6	chr11	4987025	4987181	(130099441)	C	AluSx	SINE/Alu	(155)	157	1	579476
36	2.9	0.0	0.0	chr11	5577473	5577507	(129509115)	+	(GA)n	Simple_repeat	1	35	(0)	580174
21	0.0	0.0	0.0	chr11	5577508	5577530	(129509092)	+	(TG)n	Simple_repeat	1	23	(0)	580175
22	25.6	0.0	0.0	chr11	6175667	6175718	(128910904)	+	(AC)n	Simple_repeat	1	52	(0)	580924
1305	36.3	6.2	6.1	chr11	6261780	6262686	(128823936)	C	L2b	LINE/L2	(616)	2803	1871	581039
46	0.0	0.0	0.0	chr11	6262687	6262725	(128823897)	+	(AG)n	Simple_repeat	1	39	(0)	581042
1305	36.3	6.2	6.1	chr11	6262726	6262980	(128823642)	C	L2b	LINE/L2	(1549)	1870	1640	581039
404	21.8	15.8	6.8	chr11	6474650	6474826	(128611796)	C	MIR	SINE/MIR	(17)	245	50	581387
490	32.3	6.0	5.0	chr11	6925722	6926119	(128160503)	+	L2	LINE/L2	2062	2463	(956)	581993
1478	22.7	2.5	3.5	chr11	7986410	7986815	(127099807)	+	L2	LINE/L2	2366	2767	(652)	583337
617	11.3	0.4	0.4	chr11	7986876	7986981	(127099641)	C	FLAM_C	SINE/Alu	(196)	106	1	583340
40	0.0	0.0	0.0	chr11	8810807	8810840	(126275782)	+	(TC)n	Simple_repeat	1	34	(0)	584545
20	10.7	0.0	0.0	chr11	9087526	9087555	(125999067)	+	(AG)n	Simple_repeat	1	30	(0)	584984
1576	19.8	4.0	0.3	chr11	9675016	9675308	(125411314)	+	AluJo	SINE/Alu	1	304	(8)	586325
111	3.7	0.0	0.0	chr11	9675310	9675421	(125411201)	+	(AG)n	Simple_repeat	1	112	(0)	586326
19	10.8	2.3	4.4	chr11	9675422	9675465	(125411157)	+	GA-rich	Low_complexity	1	45	(0)	586327
18	7.0	6.7	0.0	chr11	9675559	9675588	(125411034)	+	(TA)n	Simple_repeat	1	32	(0)	586328
970	20.1	12.3	13.5	chr11	9876346	9876724	(125209898)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	586686
60	1.8	0.0	0.0	chr11	10310626	10310681	(124775941)	+	(AG)n	Simple_repeat	1	56	(0)	587347
17	8.3	3.9	0.0	chr11	10708330	10708355	(124378267)	+	(TC)n	Simple_repeat	1	27	(0)	587983
32	5.1	0.0	2.3	chr11	10708369	10708411	(124378211)	+	(CTC)n	Simple_repeat	1	43	(0)	587984
2068	9.5	14.7	0.6	chr11	11383661	11383816	(123702806)	+	THE1D	LTR/ERVL-MaLR	1	210	(171)	589100
42	4.6	0.0	0.0	chr11	11383817	11383861	(123702761)	+	(CT)n	Simple_repeat	1	45	(0)	589101
2068	9.5	14.7	0.6	chr11	11383862	11384031	(123702591)	+	THE1D	LTR/ERVL-MaLR	211	380	(1)	589100
59	3.5	0.0	0.0	chr11	11638599	11638657	(123447965)	+	(CT)n	Simple_repeat	1	59	(0)	589512
28	0.0	5.3	0.0	chr11	11638658	11638689	(123447933)	+	(CA)n	Simple_repeat	1	33	(0)	589513
246	34.5	12.8	0.0	chr11	11638701	11638816	(123447806)	+	MIRc	SINE/MIR	17	149	(119)	589514
227	23.9	14.1	5.4	chr11	11877478	11877716	(123208906)	+	L1ME4a	LINE/L1	5628	5890	(234)	589889
33	5.1	0.0	0.0	chr11	11877765	11877805	(123208817)	+	(CT)n	Simple_repeat	1	41	(0)	589890
63	0.0	0.0	0.0	chr11	11877806	11877859	(123208763)	+	(TG)n	Simple_repeat	1	54	(0)	589891
273	28.1	6.8	0.0	chr11	11877881	11877976	(123208646)	+	L1ME4a	LINE/L1	5977	6079	(45)	589889
24	6.9	0.0	0.0	chr11	12143931	12143961	(122942661)	+	(GA)n	Simple_repeat	1	31	(0)	590323
2329	11.7	0.0	0.0	chr11	12175196	12175503	(122911119)	+	AluSx1	SINE/Alu	3	310	(2)	590377
1139	25.0	8.5	3.8	chr11	12175504	12176001	(122910621)	C	L2a	LINE/L2	(94)	3332	2819	590375
85	8.3	0.0	0.0	chr11	12330787	12330901	(122755721)	+	(GA)n	Simple_repeat	1	115	(0)	590625
46	5.3	0.0	1.6	chr11	12330901	12330961	(122755661)	+	(GT)n	Simple_repeat	1	61	(0)	590626
817	35.0	10.8	1.4	chr11	12668927	12669058	(122417564)	C	L2b	LINE/L2	(907)	2512	2372	591149
50	0.0	0.0	0.0	chr11	12669059	12669101	(122417521)	+	(AG)n	Simple_repeat	1	43	(0)	591150
817	35.0	10.8	1.4	chr11	12669102	12669747	(122416875)	C	L2b	LINE/L2	(1048)	2371	1653	591149
2479	10.1	0.3	0.0	chr11	12989101	12989406	(122097216)	+	AluSx1	SINE/Alu	1	307	(5)	591627
1954	13.4	7.6	4.1	chr11	12989407	12989730	(122096892)	C	THE1D	LTR/ERVL-MaLR	(39)	342	1	591626
419	31.2	8.7	5.5	chr11	13207815	13208212	(121878410)	+	L2c	LINE/L2	2965	3383	(4)	591980
39	11.2	0.0	0.0	chr11	13406557	13406614	(121680008)	+	(GA)n	Simple_repeat	1	58	(0)	592314
39	2.7	0.0	0.0	chr11	13406617	13406654	(121679968)	+	(GT)n	Simple_repeat	1	38	(0)	592315
25	9.4	0.0	0.0	chr11	13873942	13873976	(121212646)	+	(TG)n	Simple_repeat	1	35	(0)	592957
47	0.0	0.0	0.0	chr11	13873977	13874016	(121212606)	+	(GA)n	Simple_repeat	1	40	(0)	592958
1966	13.1	12.4	3.1	chr11	13886786	13887172	(121199450)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	592982
33	0.0	0.0	0.0	chr11	13899700	13899727	(121186895)	+	(GA)n	Simple_repeat	1	28	(0)	593002
30	0.0	3.5	0.0	chr11	13920590	13920618	(121166004)	+	(TC)n	Simple_repeat	1	30	(0)	593037
1301	28.7	5.7	1.7	chr11	14470687	14470899	(120615723)	+	L1MEf	LINE/L1	1320	1537	(4878)	594007
54	0.0	0.0	0.0	chr11	14470900	14470945	(120615677)	+	(AC)n	Simple_repeat	1	46	(0)	594008
1301	28.7	5.7	1.7	chr11	14470946	14471255	(120615367)	+	L1MEf	LINE/L1	1538	1865	(4550)	594007
14	0.0	8.3	0.0	chr11	14688074	14688097	(120398525)	+	(TTTC)n	Simple_repeat	1	26	(0)	594360
65	9.4	1.9	0.9	chr11	14688098	14688204	(120398418)	+	(TC)n	Simple_repeat	1	109	(0)	594361
733	30.0	8.1	3.5	chr11	14852659	14852779	(120233843)	+	L2a	LINE/L2	2721	2836	(583)	594579
813	17.6	0.8	0.0	chr11	14852780	14852910	(120233712)	+	FLAM_C	SINE/Alu	2	133	(10)	594580
924	28.8	17.0	1.3	chr11	14852911	14853399	(120233223)	+	L2a	LINE/L2	2837	3419	(7)	594579
19	6.0	2.6	5.0	chr11	16120051	16120089	(118966533)	+	(TTTG)n	Simple_repeat	1	40	(0)	596607
89	15.5	5.5	1.4	chr11	16120103	16120304	(118966318)	+	(TC)n	Simple_repeat	1	213	(0)	596608
22	9.7	2.9	0.0	chr11	16239296	16239329	(118847293)	+	(CT)n	Simple_repeat	1	35	(0)	596767
3909	14.8	4.0	0.9	chr11	16720947	16721616	(118365006)	+	MER41-int	LTR/ERV1	1	638	(5308)	597362
1025	16.4	9.6	1.9	chr11	16721625	16721835	(118364787)	+	MSTA	LTR/ERVL-MaLR	200	428	(0)	597363
6380	8.5	3.8	3.3	chr11	16721844	16722370	(118364252)	+	L1PA14	LINE/L1	4794	5329	(817)	597364
485	33.0	16.9	0.7	chr11	16969217	16969524	(118117098)	+	L3	LINE/CR1	3231	3598	(501)	597793
30	0.0	0.0	0.0	chr11	16982781	16982806	(118103816)	+	(AC)n	Simple_repeat	1	26	(0)	597822
31	7.6	0.0	0.0	chr11	16982808	16982849	(118103773)	+	(GA)n	Simple_repeat	1	42	(0)	597823
268	32.5	11.0	1.2	chr11	16982855	16983046	(118103576)	+	L2c	LINE/L2	2968	3176	(199)	597824
19	17.4	0.0	0.0	chr11	17277489	17277522	(117809100)	+	GA-rich	Low_complexity	1	34	(0)	598474
996	19.3	4.9	0.9	chr11	17830363	17830601	(117256021)	C	MSTD	LTR/ERVL-MaLR	(0)	465	194	599388
64	8.8	0.0	0.0	chr11	17830602	17830688	(117255934)	+	(GA)n	Simple_repeat	1	87	(0)	599389
616	17.8	9.2	0.0	chr11	17830730	17830858	(117255764)	C	MSTD	LTR/ERVL-MaLR	(286)	142	1	599388
21	26.8	1.6	1.5	chr11	19466921	19466984	(115619638)	+	(CT)n	Simple_repeat	1	65	(0)	602240
31	0.0	0.0	0.0	chr11	19466985	19467018	(115619604)	+	(AC)n	Simple_repeat	1	34	(0)	602241
42	4.6	0.0	0.0	chr11	19467019	19467063	(115619559)	+	(AG)n	Simple_repeat	1	45	(0)	602242
262	29.5	1.7	6.4	chr11	19467067	19467254	(115619368)	C	L1ME4a	LINE/L1	(181)	5943	5765	602243
3190	20.4	10.3	6.0	chr11	19956185	19956357	(115130265)	C	MER21C	LTR/ERVL	(25)	913	737	603121
39	2.7	0.0	0.0	chr11	19956358	19956395	(115130227)	+	(AC)n	Simple_repeat	1	38	(0)	603122
3190	20.4	10.3	6.0	chr11	19956396	19957085	(115129537)	C	MER21C	LTR/ERVL	(202)	736	9	603121
538	25.0	7.9	0.7	chr11	19976163	19976315	(115110307)	C	MER5A1	DNA/hAT-Charlie	(0)	166	2	603149
15	20.1	2.9	0.0	chr11	19976357	19976390	(115110232)	+	(CT)n	Simple_repeat	1	35	(0)	603150
30	5.0	0.0	2.3	chr11	20608888	20608898	(114477724)	+	(TG)n	Simple_repeat	1	10	(0)	604215
50	6.9	0.0	0.0	chr11	20608899	20608959	(114477663)	+	(TC)n	Simple_repeat	1	61	(0)	604216
30	5.0	0.0	2.3	chr11	20608960	20608991	(114477631)	+	(TG)n	Simple_repeat	1	32	(0)	604217
42	0.0	0.0	0.0	chr11	22182454	22182489	(112904133)	+	(TC)n	Simple_repeat	1	36	(0)	606560
16	19.9	2.4	0.0	chr11	22182594	22182634	(112903988)	+	(TATAA)n	Simple_repeat	1	42	(0)	606561
343	22.5	4.3	5.3	chr11	22182649	22182742	(112903880)	+	MIRb	SINE/MIR	118	210	(58)	606562
1919	13.5	8.4	4.1	chr11	22619749	22619941	(112466681)	+	THE1D	LTR/ERVL-MaLR	1	210	(171)	607228
33	0.0	0.0	0.0	chr11	22619942	22619969	(112466653)	+	(TC)n	Simple_repeat	1	28	(0)	607229
1919	13.5	8.4	4.1	chr11	22619970	22620139	(112466483)	+	THE1D	LTR/ERVL-MaLR	211	380	(1)	607228
1146	30.1	6.2	4.0	chr11	22620140	22620244	(112466378)	C	L2	LINE/L2	(1384)	2035	1932	607220
52	2.1	0.0	0.0	chr11	31814991	31815039	(103271583)	+	(TC)n	Simple_repeat	1	49	(0)	620446
66	9.0	0.0	1.0	chr11	32430405	32430500	(102656122)	+	(AG)n	Simple_repeat	1	96	(0)	621581
3050	23.3	2.2	6.1	chr11	33852160	33852332	(101234290)	C	L1MC4	LINE/L1	(0)	8042	7882	624164
36	2.9	0.0	0.0	chr11	33852333	33852367	(101234255)	+	(AC)n	Simple_repeat	1	35	(0)	624165
3050	24.5	4.7	9.6	chr11	33852368	33852415	(101234207)	C	L1MC4	LINE/L1	(143)	7899	7857	624164
4994	14.8	10.2	1.1	chr11	33852416	33853300	(101233322)	C	LTR28B	LTR/ERV1	(0)	974	1	624166
27	3.5	0.0	0.0	chr11	33869482	33869511	(101217111)	+	(CGC)n	Simple_repeat	1	30	(0)	624189
18	26.0	3.7	2.4	chr11	33869617	33869697	(101216925)	+	(CCGCGG)n	Simple_repeat	1	84	(0)	624190
15	8.9	0.0	0.0	chr11	33869675	33869698	(101216924)	+	(GCT)n	Simple_repeat	1	24	(0)	624191
16	17.5	5.5	3.5	chr11	33869724	33869778	(101216844)	+	(CCG)n	Simple_repeat	1	58	(0)	624192
12	10.6	0.0	10.5	chr11	35304502	35304539	(99782083)	+	(CTC)n	Simple_repeat	1	38	(0)	626548
16	8.0	3.5	3.3	chr11	35304685	35304713	(99781909)	+	(TC)n	Simple_repeat	1	30	(0)	626549
725	17.4	3.7	4.7	chr11	35304736	35304928	(99781694)	+	MER53	DNA/hAT	1	191	(2)	626550
210	29.7	11.3	1.7	chr11	35311643	35311762	(99774860)	C	MER5B	DNA/hAT-Charlie	(45)	133	1	626561
49	4.1	0.0	0.0	chr11	35311872	35311922	(99774700)	+	(GA)n	Simple_repeat	1	51	(0)	626562
1332	21.5	4.1	16.6	chr11	35647485	35648019	(99438603)	C	MSTA1	LTR/ERVL-MaLR	(0)	465	1	627107
12	35.1	1.4	1.4	chr11	35663487	35663556	(99423066)	+	GA-rich	Low_complexity	1	71	(0)	627135
40	0.0	0.0	0.0	chr11	36105206	36105239	(98981383)	+	(TG)n	Simple_repeat	1	34	(0)	627864
22	3.9	0.0	0.0	chr11	36105240	36105266	(98981356)	+	(AG)n	Simple_repeat	1	27	(0)	627865
2850	15.1	0.7	1.3	chr11	36105414	36105875	(98980747)	+	MLT1C	LTR/ERVL-MaLR	9	467	(0)	627866
493	31.7	0.0	1.4	chr11	36118206	36118346	(98968276)	C	MIR3	SINE/MIR	(51)	157	19	627885
27	26.4	1.4	0.0	chr11	36118475	36118546	(98968076)	+	GA-rich	Low_complexity	1	73	(0)	627886
1514	19.1	2.7	3.6	chr11	36118666	36118996	(98967626)	C	L1MB8	LINE/L1	(0)	6178	5851	627887
51	0.0	0.0	0.0	chr11	36140993	36141036	(98945586)	+	(TC)n	Simple_repeat	1	44	(0)	627933
823	27.8	0.0	4.8	chr11	36471529	36471755	(98614867)	C	MIRb	SINE/MIR	(8)	260	45	628498
31	0.0	0.0	0.0	chr11	36471944	36471970	(98614652)	+	(TC)n	Simple_repeat	1	27	(0)	628499
48	0.0	0.0	0.0	chr11	36471973	36472013	(98614609)	+	(CA)n	Simple_repeat	1	41	(0)	628500
261	15.0	0.7	5.0	chr11	43631529	43631689	(91454933)	C	HERV17-int	LTR/ERV1	(7761)	865	712	638764
24	21.9	0.0	1.8	chr11	43907182	43907240	(91179382)	+	(GT)n	Simple_repeat	1	57	(0)	639181
2317	28.4	7.7	7.2	chr11	43952820	43953061	(91133561)	+	MLT1J2-int	LTR/ERVL-MaLR	920	1141	(246)	639257
4178	11.0	3.5	1.6	chr11	43953062	43953233	(91133389)	+	MER41B	LTR/ERV1	1	169	(465)	639261
2287	9.8	0.3	2.9	chr11	43953234	43953540	(91133082)	+	AluSg4	SINE/Alu	2	300	(10)	639262
1377	23.8	5.8	11.8	chr11	44014117	44014692	(91071930)	C	MLT1F	LTR/ERVL-MaLR	(6)	542	4	639403
28	14.0	8.7	3.0	chr11	44310180	44310213	(90776409)	+	(CCTCTC)n	Simple_repeat	1	34	(0)	639877
35	16.1	3.5	0.0	chr11	44310214	44310330	(90776292)	+	(CT)n	Simple_repeat	1	121	(0)	639878
748	29.0	5.4	3.0	chr11	44731273	44731510	(90355112)	+	MIR	SINE/MIR	19	261	(1)	640724
14	21.8	0.0	0.0	chr11	44731512	44731544	(90355078)	+	(ATT)n	Simple_repeat	1	33	(0)	640725
44	0.0	0.0	0.0	chr11	44731597	44731634	(90354988)	+	(TG)n	Simple_repeat	1	38	(0)	640726
19	0.0	0.0	0.0	chr11	44731635	44731655	(90354967)	+	(AG)n	Simple_repeat	1	21	(0)	640727
16	0.0	0.0	0.0	chr11	44882578	44882587	(90204035)	+	(AG)n	Simple_repeat	1	10	(0)	641044
48	0.0	0.0	0.0	chr11	44882588	44882628	(90203994)	+	(AC)n	Simple_repeat	1	41	(0)	641045
20	25.0	3.2	1.5	chr11	44882667	44882729	(90203893)	+	GA-rich	Low_complexity	1	65	(0)	641046
1925	15.3	0.4	0.0	chr11	44912029	44912309	(90174313)	C	AluJb	SINE/Alu	(19)	293	12	641113
228	29.7	2.6	1.3	chr11	44912456	44912530	(90174092)	C	MIR3	SINE/MIR	(111)	97	22	641114
12	14.6	0.0	5.9	chr11	44912588	44912621	(90174001)	+	(ATGTT)n	Simple_repeat	1	34	(0)	641115
53	11.3	0.0	0.0	chr11	45068341	45068426	(90018196)	+	(TC)n	Simple_repeat	1	86	(0)	641434
24	3.5	0.0	0.0	chr11	45068427	45068455	(90018167)	+	(AC)n	Simple_repeat	1	29	(0)	641435
2174	12.3	0.0	0.0	chr11	45068496	45068804	(90017818)	+	AluSx4	SINE/Alu	2	310	(0)	641436
466	28.6	6.6	1.2	chr11	45847863	45848040	(89238582)	C	MIRc	SINE/MIR	(33)	235	60	642910
18	10.4	3.1	0.0	chr11	45922916	45922947	(89163675)	+	(GCT)n	Simple_repeat	1	33	(0)	643028
28	24.9	5.9	0.9	chr11	46120810	46120911	(88965711)	+	GA-rich	Low_complexity	1	108	(0)	643310
19	10.4	0.0	0.0	chr11	46120986	46121016	(88965606)	+	(GAG)n	Simple_repeat	1	31	(0)	643311
21	8.9	2.8	0.0	chr11	46121048	46121083	(88965539)	+	(GCT)n	Simple_repeat	1	37	(0)	643312
13	5.0	0.0	4.3	chr11	46121133	46121155	(88965467)	+	(CCT)n	Simple_repeat	1	23	(0)	643313
37	4.3	4.2	0.0	chr11	46121156	46121203	(88965419)	+	(CT)n	Simple_repeat	1	50	(0)	643314
16	21.7	0.0	0.0	chr11	46121236	46121267	(88965355)	+	G-rich	Low_complexity	1	32	(0)	643315
364	30.4	7.7	1.4	chr11	46305361	46305580	(88781042)	+	L2c	LINE/L2	2580	2814	(605)	643724
56	20.0	0.0	0.0	chr11	46305581	46305672	(88780950)	+	(TA)n	Simple_repeat	1	92	(0)	643725
908	17.6	0.0	0.0	chr11	46557824	46557965	(88528657)	+	AluSx3	SINE/Alu	134	275	(36)	644157
754	29.5	3.0	2.2	chr11	46558025	46558253	(88528369)	+	MLT1H1	LTR/ERVL-MaLR	325	555	(0)	644158
16	0.0	0.0	0.0	chr11	46617337	46617354	(88469268)	+	(TC)n	Simple_repeat	1	18	(0)	644307
2257	8.7	0.0	4.5	chr11	46844643	46844953	(88241669)	C	AluSg	SINE/Alu	(13)	297	1	644758
1737	19.9	2.1	2.1	chr11	47094271	47094655	(87991967)	+	L1MA10	LINE/L1	5949	6333	(1)	645250
929	14.3	2.9	7.3	chr11	47094656	47094801	(87991821)	C	MER3	DNA/hAT-Charlie	(70)	139	1	645249
2152	11.1	0.0	0.7	chr11	47911770	47912058	(87174564)	+	AluSz	SINE/Alu	1	287	(25)	647069
16	0.0	0.0	0.0	chr11	47912061	47912078	(87174544)	+	(TC)n	Simple_repeat	1	18	(0)	647070
37	2.9	0.0	0.0	chr11	47912079	47912114	(87174508)	+	(TG)n	Simple_repeat	1	36	(0)	647071
37	2.4	2.3	2.2	chr11	48042743	48042786	(87043836)	+	(TG)n	Simple_repeat	1	45	(0)	647430
25	11.4	0.0	0.0	chr11	48042787	48042824	(87043798)	+	(AG)n	Simple_repeat	1	38	(0)	647431
2731	12.0	4.9	0.0	chr11	57278664	57279070	(77807552)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	653391
46	2.2	2.1	0.0	chr11	57400053	57400099	(77686523)	+	(TC)n	Simple_repeat	1	48	(0)	653612
259	37.1	7.6	10.3	chr11	57400106	57400417	(77686205)	C	L2b	LINE/L2	(16)	3359	3057	653604
20	9.1	5.3	2.5	chr11	57761887	57761924	(77324698)	+	GA-rich	Low_complexity	1	40	(0)	654424
59	12.7	2.9	0.9	chr11	57772783	57772887	(77313735)	+	(TC)n	Simple_repeat	1	108	(0)	654444
2293	14.9	1.6	3.4	chr11	59499084	59499203	(75587419)	C	MER39B	LTR/ERV1	(219)	434	309	656840
53	3.8	0.0	0.0	chr11	59499204	59499257	(75587365)	+	(CT)n	Simple_repeat	1	54	(0)	656842
2293	14.9	1.6	3.4	chr11	59499258	59499573	(75587049)	C	MER39B	LTR/ERV1	(345)	308	6	656840
7481	5.8	0.2	0.1	chr11	59543517	59544936	(75541686)	C	L1PA5	LINE/L1	(0)	6154	4749	656931
296	32.0	13.9	2.7	chr11	59545043	59545238	(75541384)	C	L2	LINE/L2	(549)	2870	2652	656932
4278	14.0	3.0	0.9	chr11	59545239	59545914	(75540708)	C	LTR8	LTR/ERV1	(0)	691	1	656933
296	32.0	13.9	2.7	chr11	59545915	59546086	(75540536)	C	L2	LINE/L2	(768)	2651	2455	656932
1260	14.8	6.4	0.0	chr11	59618465	59618504	(75468118)	+	AluJr	SINE/Alu	81	129	(183)	657086
26	0.0	0.0	3.3	chr11	59618505	59618534	(75468088)	+	(AAAAC)n	Simple_repeat	1	30	(0)	657087
1260	14.8	6.4	0.0	chr11	59618535	59618682	(75467940)	+	AluJr	SINE/Alu	131	282	(30)	657086
49	0.0	0.0	0.0	chr11	59618688	59618729	(75467893)	+	(CA)n	Simple_repeat	1	42	(0)	657088
16	4.5	0.0	0.0	chr11	59618785	59618807	(75467815)	+	(CTAC)n	Simple_repeat	1	23	(0)	657089
513	15.6	6.0	0.9	chr11	59618810	59618919	(75467703)	+	L1ME3Cz	LINE/L1	882	997	(0)	657090
17	15.3	0.0	2.6	chr11	59668818	59668855	(75417767)	+	GA-rich	Low_complexity	1	38	(0)	657193
20	8.8	0.0	5.0	chr11	59668900	59668939	(75417683)	+	(GGGGAG)n	Simple_repeat	1	40	(0)	657194
26	0.0	0.0	0.0	chr11	59745659	59745687	(75340935)	+	(TC)n	Simple_repeat	1	29	(0)	657352
47	2.3	0.0	0.0	chr11	59745688	59745732	(75340890)	+	(CA)n	Simple_repeat	1	45	(0)	657353
2022	22.9	3.4	11.9	chr11	59884278	59884475	(75202147)	C	L1MB7	LINE/L1	(1769)	4869	4715	657615
53	0.0	0.0	0.0	chr11	59884476	59884520	(75202102)	+	(TC)n	Simple_repeat	1	45	(0)	657618
1916	14.0	0.0	1.4	chr11	59884525	59884803	(75201819)	C	AluSz	SINE/Alu	(37)	275	1	657619
57	0.0	0.0	0.0	chr11	60527363	60527411	(74559211)	+	(TC)n	Simple_repeat	1	49	(0)	658498
31	0.0	0.0	0.0	chr11	60527412	60527445	(74559177)	+	(GT)n	Simple_repeat	1	34	(0)	658499
2371	8.9	0.0	1.9	chr11	60527554	60527866	(74558756)	+	AluSx1	SINE/Alu	1	307	(5)	658500
30	3.4	0.0	0.0	chr11	60707304	60707333	(74379289)	+	(GA)n	Simple_repeat	1	30	(0)	658705
2392	4.6	0.4	0.0	chr11	61362956	61363235	(73723387)	+	AluSc8	SINE/Alu	1	281	(30)	660004
364	30.2	9.1	1.2	chr11	61363291	61363451	(73723171)	+	MIRc	SINE/MIR	76	250	(18)	660005
68	5.9	1.1	0.0	chr11	61538337	61538425	(73548197)	+	(GA)n	Simple_repeat	1	90	(0)	660376
12	12.0	0.0	6.5	chr11	61538494	61538524	(73548098)	+	GA-rich	Low_complexity	1	31	(0)	660377
2976	22.6	2.1	4.0	chr11	61614305	61614843	(73471779)	+	Zaphod	DNA/hAT-Tip100	136	681	(3350)	660506
2203	14.5	3.3	4.3	chr11	61614844	61615211	(73471411)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	660507
378	25.3	5.0	0.0	chr11	61950562	61950656	(73135966)	C	L2b	LINE/L2	(330)	3045	2946	661152
11	17.2	3.8	7.3	chr11	62124145	62124197	(72962425)	+	G-rich	Low_complexity	1	55	(0)	661551
273	30.8	10.0	1.3	chr11	62418148	62418384	(72668238)	C	L2c	LINE/L2	(1120)	2299	2040	662032
12	24.4	0.0	0.0	chr11	62553215	62553248	(72533374)	+	GA-rich	Low_complexity	1	34	(0)	662297
1936	8.1	6.5	0.0	chr11	62653500	62653758	(72432864)	+	AluSx	SINE/Alu	1	277	(35)	662482
91	0.0	0.0	0.0	chr11	62653777	62653853	(72432769)	+	(AG)n	Simple_repeat	1	77	(0)	662483
2914	0.3	0.0	0.0	chr11	62653926	62654236	(72432386)	C	AluYb8	SINE/Alu	(7)	311	1	662484
2337	9.2	0.0	0.3	chr11	62841037	62841341	(72245281)	+	AluSc	SINE/Alu	1	304	(5)	662921
1365	9.9	0.0	6.1	chr11	62841342	62841418	(72245204)	+	AluSc8	SINE/Alu	131	199	(112)	662920
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
13	18.7	0.0	5.0	chr11	62855797	62855836	(72230786)	+	A-rich	Low_complexity	1	40	(0)	662962
8930	1.6	0.0	0.0	chr11	63530314	63531281	(71555341)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	663822
1967	17.5	9.9	5.2	chr11	63531292	63531754	(71554868)	C	MER66C	LTR/ERV1	(67)	488	2	663823
3263	24.0	7.7	14.7	chr11	63735291	63735539	(71351083)	+	L1MEf	LINE/L1	4362	4608	(1538)	664258
60	0.0	0.0	0.0	chr11	63735551	63735601	(71351021)	+	(TC)n	Simple_repeat	1	51	(0)	664278
1242	22.6	0.0	0.0	chr11	63735608	63735824	(71350798)	C	AluSz	SINE/Alu	(90)	222	6	664279
27	3.5	0.0	0.0	chr11	63916968	63916997	(71169625)	+	(CGG)n	Simple_repeat	1	30	(0)	664646
21	21.1	5.8	3.3	chr11	63917069	63917155	(71169467)	+	(CTCG)n	Simple_repeat	1	92	(0)	664647
310	29.2	3.0	2.0	chr11	64207070	64207167	(70879455)	+	MIR3	SINE/MIR	86	184	(24)	665182
2131	9.9	1.3	3.8	chr11	64318596	64318908	(70767714)	C	AluSx	SINE/Alu	(7)	305	1	665376
370	22.6	2.3	8.6	chr11	64449345	64449484	(70637138)	+	LTR78	LTR/ERV1	248	378	(926)	665649
508	31.0	10.3	2.6	chr11	64657491	64657722	(70428900)	C	MIRc	SINE/MIR	(14)	254	3	665997
459	28.5	7.5	6.0	chr11	64708626	64708909	(70377713)	+	Charlie23a	DNA/hAT-Charlie	17	307	(32)	666082
194	33.3	0.0	0.0	chr11	64845222	64845284	(70241338)	C	MIRc	SINE/MIR	(94)	174	112	666323
17	21.5	3.4	4.9	chr11	65354770	65354828	(69731794)	+	(GC)n	Simple_repeat	1	61	(0)	667385
15	8.2	0.0	3.6	chr11	65354964	65354991	(69731631)	+	(GCGG)n	Simple_repeat	1	28	(0)	667386
13	14.3	2.2	8.5	chr11	65423133	65423178	(69663444)	+	GA-rich	Low_complexity	1	47	(0)	667512
332	31.3	6.2	8.0	chr11	65499662	65499925	(69586697)	+	L1M4c	LINE/L1	949	1207	(5177)	667663
1937	13.4	1.3	1.0	chr11	65506779	65507076	(69579546)	C	AluSx3	SINE/Alu	(12)	299	1	667666
2443	8.5	1.0	0.0	chr11	65507915	65508220	(69578402)	+	AluSp	SINE/Alu	1	309	(4)	667667
247	10.8	6.5	0.6	chr11	65516229	65516702	(69569920)	+	GA-rich	Low_complexity	1	505	(0)	667692
289	22.1	6.9	0.0	chr11	65516892	65516986	(69569636)	C	L1MEd	LINE/L1	(5495)	1591	1490	667693
397	24.8	9.2	3.7	chr11	65575384	65575517	(69511105)	C	MIRb	SINE/MIR	(37)	231	90	667799
419	30.3	1.5	2.2	chr11	65575662	65575796	(69510826)	+	MIRb	SINE/MIR	54	187	(81)	667800
13	22.1	0.0	6.2	chr11	65652660	65652707	(69433915)	+	(CCGCC)n	Simple_repeat	1	48	(0)	667895
611	22.1	16.0	6.6	chr11	65902058	65902270	(69184352)	+	MIRc	SINE/MIR	27	263	(5)	668388
24	0.0	0.0	0.0	chr11	65902336	65902361	(69184261)	+	(TG)n	Simple_repeat	1	26	(0)	668389
36	4.3	4.1	0.0	chr11	65902361	65902409	(69184213)	+	(GA)n	Simple_repeat	1	51	(0)	668390
701	25.1	8.8	3.8	chr11	65902417	65902652	(69183970)	+	MIRb	SINE/MIR	5	253	(15)	668391
1945	12.8	0.7	0.4	chr11	66552575	66552855	(68533767)	+	AluSx	SINE/Alu	1	282	(30)	669779
23	0.0	0.0	0.0	chr11	66552856	66552880	(68533742)	+	(TC)n	Simple_repeat	1	25	(0)	669780
37	0.0	0.0	0.0	chr11	66552881	66552912	(68533710)	+	(CA)n	Simple_repeat	1	32	(0)	669781
2099	11.9	0.4	0.0	chr11	66552975	66553251	(68533371)	+	AluSx4	SINE/Alu	1	278	(32)	669782
13	22.7	0.0	0.0	chr11	66617063	66617098	(68469524)	+	G-rich	Low_complexity	1	36	(0)	669932
307	35.8	4.4	8.1	chr11	66966085	66966345	(68120277)	+	L2c	LINE/L2	3026	3276	(111)	670596
36	5.2	0.0	0.0	chr11	67242265	67242304	(67844318)	+	(TG)n	Simple_repeat	1	40	(0)	671294
16	9.6	0.0	0.0	chr11	67242305	67242327	(67844295)	+	(AG)n	Simple_repeat	1	23	(0)	671295
13	19.5	0.0	2.7	chr11	67242328	67242341	(67844281)	+	(AGAGAT)n	Simple_repeat	1	37	(0)	671296
24	0.0	0.0	3.3	chr11	67545740	67545765	(67540857)	+	(GT)n	Simple_repeat	1	26	(0)	671846
40	2.6	0.0	0.0	chr11	67545766	67545804	(67540818)	+	(GA)n	Simple_repeat	1	39	(0)	671847
2045	20.3	12.5	5.9	chr11	67545928	67545992	(67540630)	+	MLT1F1	LTR/ERVL-MaLR	1	63	(506)	671848
1813	14.6	0.0	3.1	chr11	67545993	67546280	(67540342)	+	AluJb	SINE/Alu	4	282	(30)	671849
5492	12.9	2.8	4.6	chr11	67572535	67573506	(67513116)	+	LTR13_	LTR/ERVK	1	954	(0)	671912
304	24.3	0.0	0.9	chr11	67629552	67629665	(67456957)	C	MIRc	SINE/MIR	(71)	191	86	671999
17	24.9	3.7	3.6	chr11	67629812	67629892	(67456730)	+	(CCGCGG)n	Simple_repeat	1	84	(0)	672000
2468	10.3	0.0	0.0	chr11	67687752	67688063	(67398559)	+	AluSx1	SINE/Alu	1	312	(0)	672104
1570	21.8	5.6	4.6	chr11	67688064	67688081	(67398541)	+	MLT1A	LTR/ERVL-MaLR	157	171	(203)	672103
41	6.4	0.0	0.0	chr11	67688082	67688130	(67398492)	+	(TC)n	Simple_repeat	1	49	(0)	672105
1570	21.8	5.6	4.6	chr11	67688131	67688315	(67398307)	+	MLT1A	LTR/ERVL-MaLR	172	374	(0)	672103
2198	9.0	1.0	0.3	chr11	68459681	68459969	(66626653)	+	AluSq2	SINE/Alu	1	291	(22)	673465
488	16.4	0.0	0.0	chr11	68460147	68460219	(66626403)	C	tRNA-Ala-GCY	tRNA	(2)	74	2	673466
1041	23.1	11.0	4.1	chr11	68593952	68594216	(66492406)	+	L1MEc	LINE/L1	2349	2637	(3682)	673688
271	15.6	6.2	0.0	chr11	68594217	68594261	(66492361)	+	FAM	SINE/Alu	118	165	(20)	673690
77	5.1	2.0	0.0	chr11	68594266	68594366	(66492256)	+	(GA)n	Simple_repeat	1	103	(0)	673691
882	12.9	0.0	5.0	chr11	68594375	68594513	(66492109)	+	FLAM_C	SINE/Alu	1	132	(11)	673692
232	38.5	6.2	2.2	chr11	69444370	69444507	(65642115)	+	MIRb	SINE/MIR	116	259	(3)	675104
38	2.8	0.0	0.0	chr11	69453512	69453548	(65633074)	+	(GT)n	Simple_repeat	1	37	(0)	675121
1686	19.3	13.3	2.7	chr11	69453549	69453872	(65632750)	C	MLT2D	LTR/ERVL	(42)	372	1	675120
2152	11.2	0.0	0.0	chr11	69528572	69528848	(65557774)	+	AluSx	SINE/Alu	1	277	(35)	675239
53	2.0	0.0	0.0	chr11	69528850	69528899	(65557723)	+	(TC)n	Simple_repeat	1	50	(0)	675240
20	0.0	0.0	0.0	chr11	69528901	69528922	(65557700)	+	(AT)n	Simple_repeat	1	22	(0)	675241
772	19.5	1.9	0.0	chr11	69916883	69917036	(65169586)	C	MLT1D	LTR/ERVL-MaLR	(110)	395	239	675952
47	9.2	5.3	0.0	chr11	69917050	69917143	(65169479)	+	(CT)n	Simple_repeat	1	99	(0)	675955
18	10.1	0.0	2.9	chr11	69917148	69917181	(65169441)	+	(GCCCT)n	Simple_repeat	1	34	(0)	675956
467	11.6	5.2	0.1	chr11	69917181	69918020	(65168602)	+	(CT)n	Simple_repeat	1	884	(0)	675957
453	29.5	12.4	2.1	chr11	69957791	69958011	(65128611)	+	MIRb	SINE/MIR	6	262	(6)	676018
222	33.8	6.6	1.4	chr11	69958087	69958230	(65128392)	C	MIR3	SINE/MIR	(49)	159	8	676019
502	29.9	2.1	0.0	chr11	70710658	70710844	(64375778)	+	MLT1E2	LTR/ERVL-MaLR	358	548	(79)	677250
20	19.4	0.0	2.5	chr11	70710981	70711037	(64375585)	+	GA-rich	Low_complexity	1	55	(0)	677251
31	0.0	0.0	0.0	chr11	71675012	71675038	(63411584)	+	(TC)n	Simple_repeat	1	27	(0)	678607
20	22.3	3.1	1.5	chr11	71675057	71675120	(63411502)	+	(TCTCTG)n	Simple_repeat	1	66	(0)	678608
3277	11.1	0.7	0.0	chr11	71675130	71675588	(63411034)	C	HERVK-int	LTR/ERVK	(1918)	5618	5157	678606
34	10.3	1.4	6.8	chr11	71765686	71765757	(63320865)	+	(TC)n	Simple_repeat	1	73	(0)	678739
18	25.1	3.3	0.0	chr11	72674363	72674423	(62412199)	+	(CTGCCG)n	Simple_repeat	1	63	(0)	680388
36	9.4	3.5	0.0	chr11	72722141	72722197	(62364425)	+	(GA)n	Simple_repeat	1	59	(0)	680458
37	5.1	0.0	0.0	chr11	72725296	72725336	(62361286)	+	(CT)n	Simple_repeat	1	41	(0)	680465
1730	15.5	0.7	4.1	chr11	73248998	73249314	(61837308)	C	AluJr4	SINE/Alu	(6)	306	1	681479
246	34.1	14.8	0.0	chr11	73295832	73295969	(61790653)	C	L2c	LINE/L2	(3)	3384	3211	681577
18	11.6	0.0	0.0	chr11	73325551	73325578	(61761044)	+	(CT)n	Simple_repeat	1	28	(0)	681632
15	0.0	0.0	0.0	chr11	73598495	73598511	(61488111)	+	(CA)n	Simple_repeat	1	17	(0)	682199
39	0.0	0.0	0.0	chr11	73598518	73598553	(61488069)	+	(TCTCTCCC)n	Simple_repeat	1	36	(0)	682200
1140	13.9	0.0	2.3	chr11	73780804	73780976	(61305646)	+	AluSx1	SINE/Alu	105	273	(39)	682653
52	2.7	7.8	0.0	chr11	73780981	73781057	(61305565)	+	(AG)n	Simple_repeat	1	83	(0)	682654
511	29.2	2.2	1.1	chr11	74011592	74011752	(61074870)	C	MIRb	SINE/MIR	(5)	263	100	683223
2716	18.6	6.3	1.4	chr11	74939368	74939822	(60146800)	C	L1MC4a	LINE/L1	(795)	7087	6605	685031
50	14.8	0.0	0.0	chr11	74939831	74939912	(60146710)	+	(GA)n	Simple_repeat	1	82	(0)	685034
239	30.8	13.1	0.8	chr11	75031344	75031611	(60055011)	+	L2	LINE/L2	2704	3009	(410)	685219
27394	7.2	1.8	1.3	chr11	75040758	75044423	(60042199)	+	Harlequin-int	LTR/ERV1	263	3949	(2947)	685240
206	37.4	8.7	0.0	chr11	75399208	75399354	(59687268)	+	MIR3	SINE/MIR	33	193	(15)	685980
16	22.9	4.1	2.0	chr11	75475546	75475594	(59611028)	+	GA-rich	Low_complexity	1	51	(0)	686127
350	35.7	7.3	1.5	chr11	75718873	75719142	(59367480)	C	MamRep38	DNA/hAT	(0)	295	9	686626
1488	16.6	13.5	1.5	chr11	75883897	75884212	(59202410)	C	L1MD	LINE/L1	(465)	5714	5365	686980
45	2.4	0.0	0.0	chr11	75884213	75884255	(59202367)	+	(TC)n	Simple_repeat	1	43	(0)	686981
2656	19.9	13.3	2.8	chr11	75884256	75885248	(59201374)	C	L1MD	LINE/L1	(815)	5364	4243	686980
413	33.6	11.1	3.2	chr11	76129641	76129923	(58956699)	+	L2c	LINE/L2	2567	2879	(540)	687383
33	7.5	0.0	0.0	chr11	76129924	76129965	(58956657)	+	(CT)n	Simple_repeat	1	42	(0)	687384
496	33.0	12.2	5.2	chr11	76129966	76130431	(58956191)	+	L2c	LINE/L2	2880	3373	(14)	687383
49	0.0	0.0	0.0	chr11	76669346	76669387	(58417235)	+	(TG)n	Simple_repeat	1	42	(0)	688423
23	7.0	0.0	0.0	chr11	76669388	76669417	(58417205)	+	(AG)n	Simple_repeat	1	30	(0)	688424
689	26.6	5.0	2.4	chr11	76669447	76669690	(58416932)	C	MIRb	SINE/MIR	(1)	267	6	688425
2071	11.1	8.8	1.1	chr11	76683237	76683418	(58403204)	+	THE1D	LTR/ERVL-MaLR	3	197	(184)	688455
33	0.0	0.0	0.0	chr11	76683419	76683446	(58403176)	+	(TC)n	Simple_repeat	1	28	(0)	688456
2071	11.1	8.8	1.1	chr11	76683447	76683610	(58403012)	+	THE1D	LTR/ERVL-MaLR	198	378	(3)	688455
380	20.3	8.9	7.6	chr11	76745816	76745959	(58340663)	+	LTR16E1	LTR/ERVL	392	537	(1)	688589
1609	13.2	2.7	0.4	chr11	76746173	76746422	(58340200)	+	AluJb	SINE/Alu	6	261	(51)	688590
21	15.5	0.0	0.0	chr11	76782958	76782993	(58303629)	+	(CA)n	Simple_repeat	1	36	(0)	688673
17	23.6	5.6	1.3	chr11	76783061	76783131	(58303491)	+	G-rich	Low_complexity	1	75	(0)	688674
19248	12.8	2.8	1.8	chr11	76816407	76819621	(58267001)	C	MER51-int	LTR/ERV1	(4153)	3663	417	688727
967	12.3	0.0	7.7	chr11	76819631	76819709	(58266913)	C	MER51-int	LTR/ERV1	(6384)	155	77	688727
57	1.9	0.0	0.0	chr11	76819710	76819762	(58266860)	+	(AG)n	Simple_repeat	1	53	(0)	688733
967	12.3	0.0	7.7	chr11	76819763	76819850	(58266772)	C	MER51-int	LTR/ERV1	(6463)	76	1	688727
1656	9.1	3.6	0.0	chr11	76819851	76820092	(58266530)	C	MER51B	LTR/ERV1	(0)	377	127	688727
4298	12.6	1.0	6.8	chr11	77638005	77638557	(57448065)	+	LTR8	LTR/ERV1	1	528	(163)	690306
17	8.3	0.0	0.0	chr11	77820687	77820712	(57265910)	+	(CCG)n	Simple_repeat	1	26	(0)	690659
1748	18.8	2.9	0.0	chr11	78291549	78291863	(56794759)	C	AluJb	SINE/Alu	(0)	312	1	691751
31	0.0	0.0	0.0	chr11	78292004	78292030	(56794592)	+	(GT)n	Simple_repeat	1	27	(0)	691752
905	13.5	0.0	0.0	chr11	78307476	78307601	(56779021)	+	AluJb	SINE/Alu	1	126	(186)	691778
36	0.0	0.0	0.0	chr11	78307605	78307635	(56778987)	+	(AG)n	Simple_repeat	1	31	(0)	691779
1950	14.6	2.3	1.3	chr11	78307796	78308100	(56778522)	+	MLT2B3	LTR/ERVL	1	308	(246)	691780
12	23.5	0.0	0.0	chr11	78417107	78417141	(56669481)	+	(TGACGC)n	Simple_repeat	1	35	(0)	691988
567	15.2	0.0	0.0	chr11	78575593	78575697	(56510925)	+	FLAM_C	SINE/Alu	1	89	(44)	692292
25	20.4	0.0	0.0	chr11	78575699	78575754	(56510868)	+	(CTCTCT)n	Simple_repeat	1	56	(0)	692293
585	24.5	8.8	1.9	chr11	78575758	78575915	(56510707)	C	MIR	SINE/MIR	(90)	172	3	692294
8110	20.4	7.4	6.9	chr11	82680539	82682499	(52404123)	C	HUERS-P3b-int	LTR/ERV1	(4776)	2642	664	699274
32	3.2	0.0	0.0	chr11	82682500	82682531	(52404091)	+	(GA)n	Simple_repeat	1	32	(0)	699275
8110	20.4	7.1	7.0	chr11	82682532	82682809	(52403813)	C	HUERS-P3b-int	LTR/ERV1	(6755)	663	409	699274
645	11.5	0.0	5.0	chr11	82682796	82682896	(52403726)	C	HUERS-P3b-int	LTR/ERV1	(7322)	96	1	699274
2556	17.4	2.0	5.4	chr11	83060706	83061213	(52025409)	+	Ricksha_c	DNA/MULE-MuDR	349	848	(1200)	699949
31	5.9	0.0	0.0	chr11	83061214	83061249	(52025373)	+	(CT)n	Simple_repeat	1	36	(0)	699950
2556	17.4	2.0	5.4	chr11	83061250	83061316	(52025306)	+	Ricksha_c	DNA/MULE-MuDR	849	904	(1144)	699949
487	25.3	15.3	8.1	chr11	83061317	83061671	(52024951)	+	L1MC4	LINE/L1	7596	7990	(52)	699947
16	0.0	0.0	0.0	chr11	83724459	83724476	(51362146)	+	(GT)n	Simple_repeat	1	18	(0)	701123
54	0.0	0.0	0.0	chr11	83724477	83724522	(51362100)	+	(GA)n	Simple_repeat	1	46	(0)	701124
30	3.5	0.0	0.0	chr11	85599340	85599369	(49487253)	+	(CT)n	Simple_repeat	1	30	(0)	704084
530	25.5	21.6	1.0	chr11	85599455	85599648	(49486974)	+	MIRb	SINE/MIR	4	248	(20)	704085
13	17.2	6.9	4.8	chr11	86068534	86068591	(49018031)	+	GA-rich	Low_complexity	1	62	(0)	704855
12	22.6	0.0	2.6	chr11	86068596	86068633	(49017989)	+	G-rich	Low_complexity	1	38	(0)	704856
2460	9.6	10.3	1.5	chr11	86109132	86109521	(48977101)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	704939
51	1.9	1.8	1.8	chr11	86126628	86126683	(48959939)	+	(TC)n	Simple_repeat	1	57	(0)	704976
29	17.8	0.0	0.0	chr11	86126684	86126740	(48959882)	+	(ACAC)n	Simple_repeat	1	57	(0)	704977
2182	11.0	0.0	0.0	chr11	86173429	86173709	(48912913)	+	AluSx	SINE/Alu	2	282	(30)	705077
24	16.8	0.0	2.0	chr11	86173710	86173755	(48912867)	+	(TC)n	Simple_repeat	1	45	(0)	705078
41	0.0	0.0	0.0	chr11	86173756	86173790	(48912832)	+	(CA)n	Simple_repeat	1	35	(0)	705079
243	28.4	14.4	1.0	chr11	86173796	86173891	(48912731)	C	MIRb	SINE/MIR	(149)	119	9	705076
1170	15.7	12.4	4.2	chr11	86237453	86237688	(48848934)	C	AluJr	SINE/Alu	(14)	298	41	705203
645	24.4	2.2	0.0	chr11	86237743	86237877	(48848745)	C	Tigger3b	DNA/TcMar-Tigger	(1093)	138	1	705204
624	25.3	4.5	2.3	chr11	86416493	86416666	(48669956)	+	MIRc	SINE/MIR	72	249	(19)	705526
12	5.0	0.0	4.3	chr11	86438765	86438787	(48647835)	+	(CTTT)n	Simple_repeat	1	23	(0)	705557
1384	19.6	3.6	4.6	chr11	86438800	86439234	(48647388)	C	MLT2B4	LTR/ERVL	(0)	414	21	705558
266	14.3	0.0	2.3	chr11	86742008	86742050	(48344572)	C	LTR78	LTR/ERV1	(0)	1304	1263	706037
582	30.4	13.8	6.5	chr11	86742274	86742917	(48343705)	C	LTR78	LTR/ERV1	(581)	723	26	706038
212	34.1	3.4	0.0	chr11	86776068	86776152	(48310470)	C	MIRc	SINE/MIR	(172)	96	9	706101
76	2.7	0.0	1.3	chr11	86776207	86776284	(48310338)	+	(TC)n	Simple_repeat	1	78	(0)	706102
270	31.8	5.9	3.0	chr11	86776285	86776507	(48310115)	C	CR1-16_AMi	LINE/CR1	(217)	634	404	706103
359	16.2	9.2	4.8	chr11	86937190	86937293	(48149329)	C	Charlie4z	DNA/hAT-Charlie	(0)	167	59	706349
4277	5.8	3.2	0.0	chr11	86937365	86937900	(48148722)	+	MER41A	LTR/ERV1	1	554	(0)	706350
1401	27.2	2.6	2.3	chr11	88485387	88486060	(46600562)	C	L1P4d	LINE/L1	(5824)	1111	21	708645
35	7.7	3.6	0.0	chr11	88486139	88486193	(46600429)	+	(TG)n	Simple_repeat	1	57	(0)	708647
33	2.5	2.4	0.0	chr11	88522563	88522603	(46564019)	+	(TC)n	Simple_repeat	1	42	(0)	708702
48	0.0	0.0	0.0	chr11	88522604	88522644	(46563978)	+	(TG)n	Simple_repeat	1	41	(0)	708703
21347	12.6	3.6	1.5	chr11	93714549	93716498	(41370124)	C	L1MA3	LINE/L1	(5512)	2053	94	716030
2540	10.6	7.4	1.3	chr11	93861745	93862125	(41224497)	C	MER48	LTR/ERV1	(0)	407	2	716321
5504	12.6	7.0	0.7	chr11	93862127	93863029	(41223593)	C	HERVH48-int	LTR/ERV1	(0)	6654	5794	716321
741	25.6	4.6	2.4	chr11	94457623	94457834	(40628788)	C	MIR	SINE/MIR	(17)	245	29	717154
26	9.1	0.0	0.0	chr11	94457852	94457887	(40628735)	+	(CT)n	Simple_repeat	1	36	(0)	717155
31	0.0	0.0	0.0	chr11	94457888	94457914	(40628708)	+	(CA)n	Simple_repeat	1	27	(0)	717156
194	34.7	0.0	5.3	chr11	94458017	94458092	(40628530)	+	LFSINE_Vert	SINE/tRNA	228	299	(160)	717157
43	0.0	0.0	0.0	chr11	94707215	94707251	(40379371)	+	(TC)n	Simple_repeat	1	37	(0)	717547
30	0.0	0.0	0.0	chr11	94707252	94707284	(40379338)	+	(GT)n	Simple_repeat	1	33	(0)	717548
41	4.7	0.0	0.0	chr11	95243025	95243068	(39843554)	+	(TC)n	Simple_repeat	1	44	(0)	718330
13	21.1	5.8	5.6	chr11	95414954	95415024	(39671598)	+	GA-rich	Low_complexity	1	71	(0)	718595
38	4.9	0.0	0.0	chr11	95415100	95415141	(39671481)	+	(AG)n	Simple_repeat	1	42	(0)	718596
23	0.0	0.0	0.0	chr11	95415142	95415166	(39671456)	+	(TG)n	Simple_repeat	1	25	(0)	718597
46	0.0	0.0	0.0	chr11	95415167	95415205	(39671417)	+	(GA)n	Simple_repeat	1	39	(0)	718598
267	39.1	2.7	0.9	chr11	95586285	95586501	(39500121)	+	UCON8	DNA	751	971	(144)	718869
38	2.8	0.0	0.0	chr11	95586573	95586609	(39500013)	+	(CT)n	Simple_repeat	1	37	(0)	718870
219	19.6	2.1	2.1	chr11	96068388	96068434	(39018188)	+	MER5B	DNA/hAT-Charlie	1	47	(131)	719568
47	0.0	0.0	0.0	chr11	96068439	96068478	(39018144)	+	(CA)n	Simple_repeat	1	40	(0)	719569
18	12.1	0.0	0.0	chr11	96068479	96068506	(39018116)	+	(GA)n	Simple_repeat	1	28	(0)	719570
313	16.1	8.8	0.0	chr11	96068507	96068568	(39018054)	C	MER5B	DNA/hAT-Charlie	(66)	112	45	719571
2312	7.4	0.0	0.7	chr11	96068579	96068847	(39017775)	+	AluY	SINE/Alu	33	299	(12)	719572
16	8.5	4.0	0.0	chr11	96076408	96076432	(39010190)	+	(CT)n	Simple_repeat	1	26	(0)	719585
49	0.0	0.0	0.0	chr11	96076433	96076474	(39010148)	+	(CA)n	Simple_repeat	1	42	(0)	719586
295	9.5	0.0	0.0	chr11	96212472	96212513	(38874109)	C	MADE1	DNA/TcMar-Mariner	(38)	42	1	719809
924	26.6	13.0	3.2	chr11	96330521	96330989	(38755633)	C	MLT1H	LTR/ERVL-MaLR	(25)	524	3	719993
20	16.6	4.2	0.0	chr11	96343173	96343220	(38743402)	+	GA-rich	Low_complexity	1	50	(0)	720005
95	3.3	0.0	0.0	chr11	96914326	96914419	(38172203)	+	(TC)n	Simple_repeat	1	94	(0)	720653
1448	22.4	11.1	6.1	chr11	97963447	97964133	(37122489)	C	MER61E	LTR/ERV1	(2)	777	1	721865
1519	34.9	7.0	1.9	chr11	97964135	97965160	(37121462)	C	HERV9-int	LTR/ERV1	(1)	8435	7353	721866
1432	23.5	7.1	7.4	chr11	97973243	97973850	(37112772)	C	MER61E	LTR/ERV1	(29)	616	7	721869
578	22.7	7.8	0.0	chr11	98057280	98057455	(37029167)	C	L1M5	LINE/L1	(2643)	3503	3313	721988
29	7.8	0.0	0.0	chr11	98057507	98057547	(37029075)	+	(AGAGACAG)n	Simple_repeat	1	41	(0)	721990
31	2.8	0.0	0.0	chr11	100875071	100875107	(34211515)	+	(CT)n	Simple_repeat	1	37	(0)	725646
54	0.0	0.0	0.0	chr11	100875108	100875153	(34211469)	+	(TG)n	Simple_repeat	1	46	(0)	725647
28	19.7	1.1	5.5	chr11	100875181	100875270	(34211352)	+	(TTTTTAT)n	Simple_repeat	1	91	(0)	725648
1879	15.3	9.3	0.3	chr11	102252995	102253354	(32833268)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	727632
534	28.9	5.6	8.3	chr11	102253355	102253692	(32832930)	C	LTR79	LTR/ERVL	(19)	508	179	727631
30	24.8	1.2	2.4	chr11	107530514	107530595	(27556027)	+	(TC)n	Simple_repeat	1	83	(0)	735037
57	0.0	0.0	0.0	chr11	107530601	107530649	(27555973)	+	(AC)n	Simple_repeat	1	49	(0)	735038
20	8.9	5.7	5.4	chr11	107858872	107858924	(27227698)	+	(CGCT)n	Simple_repeat	1	56	(0)	735683
643	24.1	0.6	1.2	chr11	107864010	107864169	(27222453)	C	MLT1G1	LTR/ERVL-MaLR	(4)	565	407	735701
61	0.0	0.0	0.0	chr11	107864237	107864288	(27222334)	+	(TC)n	Simple_repeat	1	52	(0)	735702
289	25.0	0.8	18.4	chr11	107864310	107864456	(27222166)	C	MLT1G1	LTR/ERVL-MaLR	(299)	292	172	735701
1374	25.6	7.8	8.0	chr11	107864460	107864951	(27221671)	C	MER90a	LTR/ERV1	(0)	614	110	735703
21	6.8	3.2	0.0	chr11	108013468	108013498	(27073124)	+	(TC)n	Simple_repeat	1	32	(0)	736046
1826	11.4	7.9	4.6	chr11	108061726	108062093	(27024529)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	736152
229	23.1	3.7	1.3	chr11	108062119	108062197	(27024425)	C	L1MC5a	LINE/L1	(2244)	533	453	736153
36	8.7	0.0	0.0	chr11	109012766	109012814	(26073808)	+	(AC)n	Simple_repeat	1	49	(0)	737742
25	3.4	0.0	0.0	chr11	109012815	109012844	(26073778)	+	(GA)n	Simple_repeat	1	30	(0)	737743
34	0.0	3.0	0.0	chr11	109943269	109943301	(25143321)	+	(TG)n	Simple_repeat	1	34	(0)	739020
32	16.6	0.0	0.0	chr11	109943302	109943356	(25143266)	+	GA-rich	Low_complexity	1	55	(0)	739021
16	21.7	0.0	0.0	chr11	109943398	109943429	(25143193)	+	(T)n	Simple_repeat	1	32	(0)	739022
31	25.8	3.7	1.8	chr11	112113406	112113514	(22973108)	+	(TA)n	Simple_repeat	1	113	(0)	742560
48	0.0	0.0	0.0	chr11	112113515	112113555	(22973067)	+	(AG)n	Simple_repeat	1	41	(0)	742561
13	12.5	0.0	3.5	chr11	112113720	112113748	(22972874)	+	(TTTC)n	Simple_repeat	1	29	(0)	742562
31	26.9	2.6	0.8	chr11	113699157	113699211	(21387411)	+	(TCTGTC)n	Simple_repeat	1	58	(0)	745013
104	2.1	0.0	0.0	chr11	113699212	113699308	(21387314)	+	(TC)n	Simple_repeat	1	97	(0)	745014
31	26.9	2.6	0.8	chr11	113699309	113699366	(21387256)	+	(TCTGTC)n	Simple_repeat	5	61	(0)	745015
691	27.4	15.0	2.5	chr11	113838290	113838855	(21247767)	+	L2a	LINE/L2	2750	3394	(32)	745234
1668	20.1	8.2	10.8	chr11	113995278	113995546	(21091076)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	236	745546
36	0.0	0.0	0.0	chr11	113995547	113995577	(21091045)	+	(TG)n	Simple_repeat	1	31	(0)	745547
1668	20.1	8.2	10.8	chr11	113995578	113995825	(21090797)	C	MLT1D	LTR/ERVL-MaLR	(270)	235	3	745546
23	11.3	0.0	4.8	chr11	114080426	114080467	(21006155)	+	(CT)n	Simple_repeat	1	42	(0)	745717
16	9.1	0.0	3.9	chr11	114162872	114162897	(20923725)	+	(TC)n	Simple_repeat	1	26	(0)	745822
28	12.6	0.0	0.0	chr11	114179258	114179300	(20907322)	+	(GA)n	Simple_repeat	1	43	(0)	745853
317	26.4	17.7	1.0	chr11	116827954	116828085	(18258537)	+	MIRc	SINE/MIR	30	183	(85)	750020
295	26.9	11.5	11.1	chr11	116827990	116828132	(18258490)	C	MamTip2	DNA/hAT-Tip100	(16)	289	146	750021
29	0.0	0.0	0.0	chr11	116828133	116828157	(18258465)	+	(TC)n	Simple_repeat	1	25	(0)	750022
2039	11.1	2.5	0.4	chr11	116828158	116828437	(18258185)	C	AluSz6	SINE/Alu	(26)	286	1	750023
1899	13.5	8.4	0.3	chr11	116860718	116861067	(18225555)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	750071
696	25.9	15.7	1.4	chr11	116861068	116861180	(18225442)	C	MIR	SINE/MIR	(150)	112	2	750070
297	29.1	6.0	3.5	chr11	117071441	117071554	(18015068)	+	L2b	LINE/L2	3254	3370	(5)	750464
13	20.4	0.0	2.8	chr11	117071557	117071592	(18015030)	+	GA-rich	Low_complexity	1	36	(0)	750465
1570	18.0	3.4	3.7	chr11	117071625	117071918	(18014704)	C	AluJb	SINE/Alu	(19)	293	1	750466
193	23.3	7.7	0.0	chr11	117648945	117649004	(17437618)	C	MIR	SINE/MIR	(0)	262	198	751511
22	7.2	0.0	0.0	chr11	117649005	117649033	(17437589)	+	(CT)n	Simple_repeat	1	29	(0)	751512
55	0.0	0.0	0.0	chr11	117649042	117649088	(17437534)	+	(TG)n	Simple_repeat	1	47	(0)	751513
1983	11.1	3.1	0.4	chr11	117649090	117649368	(17437254)	C	AluSq2	SINE/Alu	(26)	287	1	751514
23	16.4	1.9	3.8	chr11	118176619	118176670	(16909952)	+	GA-rich	Low_complexity	1	53	(0)	752450
41	2.4	0.0	2.3	chr11	118434450	118434493	(16652129)	+	(AG)n	Simple_repeat	1	44	(0)	752904
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
194	35.5	6.8	1.4	chr11	118620914	118620969	(16465653)	C	OldhAT1	DNA/hAT-Ac	(115)	2733	2614	753249
263	17.8	8.8	0.0	chr11	118620970	118621042	(16465580)	C	MIRc	SINE/MIR	(124)	144	65	753250
194	35.5	6.8	1.4	chr11	118621043	118621053	(16465569)	C	OldhAT1	DNA/hAT-Ac	(115)	2613	2586	753249
390	26.6	9.1	2.0	chr11	118926283	118926450	(16160172)	+	L2c	LINE/L2	3185	3382	(5)	753870
21	0.0	0.0	0.0	chr11	118926498	118926518	(16160104)	+	(TC)n	Simple_repeat	1	21	(0)	753871
31	0.0	0.0	0.0	chr11	118926519	118926545	(16160077)	+	(CA)n	Simple_repeat	1	27	(0)	753872
2334	8.5	0.3	0.0	chr11	118926598	118926891	(16159731)	C	AluSq2	SINE/Alu	(18)	295	1	753873
14	25.2	3.5	1.7	chr11	119729178	119729235	(15357387)	+	(CGCTCT)n	Simple_repeat	1	60	(0)	755357
290	25.0	11.8	1.3	chr11	119729597	119729745	(15356877)	C	MIR3	SINE/MIR	(24)	184	30	755358
71	20.8	0.0	0.7	chr11	120347119	120347265	(14739357)	+	(CTTT)n	Simple_repeat	1	147	(0)	756404
43	0.0	0.0	0.0	chr11	120347271	120347307	(14739315)	+	(TG)n	Simple_repeat	1	37	(0)	756405
343	32.4	7.1	5.9	chr11	121257339	121257712	(13828910)	+	L2c	LINE/L2	1839	2217	(1202)	757842
1391	24.5	6.2	0.8	chr11	124022344	124022709	(11063913)	+	MLT1E1A	LTR/ERVL-MaLR	285	671	(9)	762451
15	21.7	0.0	0.0	chr11	124022740	124022771	(11063851)	+	(TG)n	Simple_repeat	1	32	(0)	762452
72	0.0	0.0	0.0	chr11	124022774	124022834	(11063788)	+	(AG)n	Simple_repeat	1	61	(0)	762453
24	9.5	0.0	0.0	chr11	124095640	124095673	(10990949)	+	(TC)n	Simple_repeat	1	34	(0)	762540
31	6.7	4.3	0.0	chr11	124096099	124096145	(10990477)	+	(GA)n	Simple_repeat	1	49	(0)	762541
1940	26.3	8.0	4.1	chr11	124400901	124401055	(10685567)	C	Charlie17b	DNA/hAT-Charlie	(211)	993	839	762981
1057	22.8	15.9	3.5	chr11	124401056	124401216	(10685406)	C	MSTD	LTR/ERVL-MaLR	(0)	396	201	762982
33	3.1	0.0	0.0	chr11	124401217	124401249	(10685373)	+	(AG)n	Simple_repeat	1	33	(0)	762983
1057	22.8	15.9	3.5	chr11	124401250	124401432	(10685190)	C	MSTD	LTR/ERVL-MaLR	(196)	200	2	762982
55	20.1	6.2	0.0	chr11	124616875	124617019	(10469603)	+	(CT)n	Simple_repeat	1	154	(0)	763321
12	20.1	2.6	2.6	chr11	125328171	125328208	(9758414)	+	(CCCTAG)n	Simple_repeat	1	39	(0)	764339
280	25.4	1.5	2.9	chr11	125328256	125328324	(9758298)	+	L2c	LINE/L2	3242	3309	(78)	764340
54	15.1	0.0	0.0	chr11	125328325	125328419	(9758203)	+	GA-rich	Low_complexity	1	95	(0)	764341
243	30.6	14.9	0.7	chr11	125402507	125402644	(9683978)	C	L2b	LINE/L2	(2)	3373	3213	764446
716	26.4	3.0	4.1	chr11	125411147	125411385	(9675237)	+	MIRc	SINE/MIR	17	250	(18)	764462
56	0.0	0.0	0.0	chr11	125411463	125411510	(9675112)	+	(TC)n	Simple_repeat	1	48	(0)	764463
1572	14.5	11.6	3.4	chr11	125488102	125488394	(9598228)	+	MER44A	DNA/TcMar-Tigger	1	320	(19)	764596
2174	10.7	0.0	0.4	chr11	125488399	125488708	(9597914)	+	AluSg	SINE/Alu	1	310	(0)	764597
12	10.6	2.9	5.7	chr11	125626315	125626348	(9460274)	+	(TGGAAT)n	Simple_repeat	1	35	(0)	764863
2021	16.8	9.6	1.3	chr11	128441320	128441507	(6645115)	+	MSTA	LTR/ERVL-MaLR	1	213	(215)	768939
34	0.0	2.7	2.6	chr11	128441508	128441544	(6645078)	+	(TC)n	Simple_repeat	1	38	(0)	768940
2021	16.8	9.6	1.3	chr11	128441545	128441747	(6644875)	+	MSTA	LTR/ERVL-MaLR	214	428	(0)	768939
296	27.0	6.7	0.8	chr11	129895861	129895987	(5190635)	C	MIRb	SINE/MIR	(8)	260	126	770957
60	0.0	0.0	0.0	chr11	129923644	129923694	(5162928)	+	(GA)n	Simple_repeat	1	51	(0)	771000
23	16.6	6.6	0.0	chr11	130434673	130434733	(4651889)	+	(CTCG)n	Simple_repeat	1	65	(0)	771915
18	0.0	0.0	0.0	chr11	131064758	131064777	(4021845)	+	(TC)n	Simple_repeat	1	20	(0)	772760
37	0.0	0.0	0.0	chr11	133947709	133947740	(1138882)	+	(TC)n	Simple_repeat	1	32	(0)	776554
60	29.1	3.0	3.6	chr11	133947746	133948042	(1138580)	+	(TCTG)n	Simple_repeat	1	306	(0)	776555
33	0.0	0.0	0.0	chr11	134319692	134319719	(766903)	+	(CT)n	Simple_repeat	1	28	(0)	777085
34	17.8	0.0	0.0	chr11	134319720	134319779	(766843)	+	(GT)n	Simple_repeat	1	60	(0)	777086
282	33.8	10.1	0.0	chr11	134418914	134419046	(667576)	+	MER117	DNA/hAT-Charlie	3	150	(47)	777194
34	0.0	0.0	0.0	chr11	134419062	134419077	(667545)	+	(GA)n	Simple_repeat	1	16	(0)	777195
44	0.0	0.0	0.0	chr11	134419078	134419115	(667507)	+	(CA)n	Simple_repeat	1	38	(0)	777196
34	0.0	0.0	0.0	chr11	134419116	134419135	(667487)	+	(GA)n	Simple_repeat	1	20	(0)	777197
268	35.4	12.7	1.7	chr11	134419254	134419434	(667188)	C	L2c	LINE/L2	(1)	3386	3183	777198
47	0.0	0.0	0.0	chr11	134868573	134868612	(218010)	+	(AC)n	Simple_repeat	1	40	(0)	777754
1994	14.7	0.7	0.3	chr12	979158	979456	(132295853)	+	AluSx	SINE/Alu	1	300	(12)	779834
1427	19.1	3.7	14.0	chr12	979457	979764	(132295545)	+	MLT1B	LTR/ERVL-MaLR	120	376	(14)	779833
54	8.0	1.2	1.2	chr12	1007461	1007541	(132267768)	+	(TC)n	Simple_repeat	1	82	(0)	779908
25	0.0	0.0	0.0	chr12	1007542	1007569	(132267740)	+	(GT)n	Simple_repeat	1	28	(0)	779909
462	21.9	0.0	3.7	chr12	1007664	1007772	(132267537)	C	MER3	DNA/hAT-Charlie	(2)	207	103	779910
1855	14.4	0.0	1.4	chr12	1601114	1601390	(131673919)	+	AluJb	SINE/Alu	1	273	(39)	780933
36697	7.0	1.5	1.3	chr12	1710753	1711596	(131563713)	C	HERV9NC-int	LTR/ERV1	(115)	6003	5161	781148
38	5.9	3.8	0.0	chr12	1711597	1711649	(131563660)	+	(TC)n	Simple_repeat	1	55	(0)	781149
36697	7.0	1.5	1.3	chr12	1711650	1715498	(131559811)	C	HERV9NC-int	LTR/ERV1	(958)	5160	1301	781148
1962	15.8	1.7	0.7	chr12	1742094	1742391	(131532918)	C	AluJo	SINE/Alu	(10)	302	2	781197
450	27.4	3.1	11.2	chr12	3600006	3600247	(129675062)	+	MIRb	SINE/MIR	41	262	(6)	784091
181	29.0	2.8	2.8	chr12	3600317	3600387	(129674922)	+	MamSINE1	SINE/tRNA-RTE	216	286	(4)	784090
1065	27.5	8.8	8.0	chr12	3882165	3882591	(129392718)	C	L2a	LINE/L2	(0)	3426	2996	784534
38	0.0	0.0	0.0	chr12	3882593	3882625	(129392684)	+	(GA)n	Simple_repeat	1	33	(0)	784535
32	13.1	0.0	0.0	chr12	3882626	3882675	(129392634)	+	(TG)n	Simple_repeat	1	50	(0)	784536
67	6.5	0.0	0.0	chr12	5873197	5873276	(127402033)	+	(CT)n	Simple_repeat	1	80	(0)	787657
190	25.4	0.0	9.2	chr12	6339726	6339790	(126935519)	+	L2a	LINE/L2	3302	3360	(66)	788504
23	0.0	0.0	0.0	chr12	6339817	6339841	(126935468)	+	(TC)n	Simple_repeat	1	25	(0)	788505
41	0.0	0.0	0.0	chr12	6339842	6339876	(126935433)	+	(CA)n	Simple_repeat	1	35	(0)	788506
2073	16.6	0.0	0.0	chr12	6623258	6623559	(126651750)	+	AluSz6	SINE/Alu	7	308	(4)	789050
405	20.2	13.1	1.6	chr12	6623649	6623769	(126651540)	C	L2a	LINE/L2	(21)	3405	3269	789051
30	0.0	0.0	0.0	chr12	6635958	6635986	(126639323)	+	(CTGGG)n	Simple_repeat	1	29	(0)	789082
23	14.5	0.0	0.0	chr12	6778615	6778652	(126496657)	+	(TC)n	Simple_repeat	1	38	(0)	789364
38	5.0	0.0	0.0	chr12	6925101	6925142	(126350167)	+	(TG)n	Simple_repeat	1	42	(0)	789654
15	0.0	0.0	0.0	chr12	6925143	6925159	(126350150)	+	(AG)n	Simple_repeat	1	17	(0)	789655
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
541	3.2	0.0	0.0	chr12	6943817	6943878	(126331431)	+	U7	snRNA	2	63	(0)	789678
18	0.0	0.0	0.0	chr12	7971309	7971328	(125303981)	+	(TC)n	Simple_repeat	1	20	(0)	791513
17	0.0	0.0	0.0	chr12	7971328	7971346	(125303963)	+	(CA)n	Simple_repeat	1	19	(0)	791514
16	5.3	0.0	0.0	chr12	8082755	8082774	(125192535)	+	(CT)n	Simple_repeat	1	20	(0)	791758
50	0.0	0.0	0.0	chr12	8082775	8082817	(125192492)	+	(CA)n	Simple_repeat	1	43	(0)	791759
59	1.8	0.0	0.0	chr12	8610985	8611039	(124664270)	+	(GT)n	Simple_repeat	1	55	(0)	792567
15	21.4	1.6	6.3	chr12	8697834	8697897	(124577412)	+	(CGCCG)n	Simple_repeat	1	60	(0)	792746
12	33.2	0.0	1.7	chr12	8698023	8698080	(124577229)	+	G-rich	Low_complexity	1	58	(0)	792747
2101	17.0	6.3	1.2	chr12	9751687	9751892	(123523417)	C	MSTA	LTR/ERVL-MaLR	(0)	428	221	794270
31	3.3	0.0	0.0	chr12	9751893	9751923	(123523386)	+	(AG)n	Simple_repeat	1	31	(0)	794271
2101	17.0	6.3	1.2	chr12	9751924	9752122	(123523187)	C	MSTA	LTR/ERVL-MaLR	(208)	220	2	794270
27	0.0	0.0	0.0	chr12	10027518	10027543	(123247766)	+	(CTGC)n	Simple_repeat	1	26	(0)	794621
30	23.3	0.0	3.6	chr12	10027544	10027627	(123247682)	+	(TCCC)n	Simple_repeat	1	84	(0)	794622
47	10.7	3.3	0.0	chr12	10027651	10027741	(123247568)	+	(TC)n	Simple_repeat	1	94	(0)	794623
17	0.0	0.0	0.0	chr12	12788890	12788908	(120486401)	+	(GA)n	Simple_repeat	1	19	(0)	798779
240	33.4	22.5	3.7	chr12	14902417	14902610	(118372699)	C	MIRb	SINE/MIR	(22)	246	3	802071
17	7.4	6.9	0.0	chr12	14902721	14902749	(118372560)	+	(AG)n	Simple_repeat	1	31	(0)	802072
16	16.1	11.1	4.0	chr12	14902811	14902900	(118372409)	+	(TTATTTC)n	Simple_repeat	1	100	(0)	802073
264	29.7	2.8	6.8	chr12	14953563	14953710	(118321599)	C	Charlie4z	DNA/hAT-Charlie	(6)	161	20	802152
47	13.1	0.0	0.0	chr12	14953819	14953895	(118321414)	+	(CTCT)n	Simple_repeat	1	77	(0)	802153
1744	17.7	0.3	1.0	chr12	14953898	14953920	(118321389)	C	AluSz	SINE/Alu	(1)	311	290	802154
51	7.8	0.0	0.0	chr12	14953921	14953989	(118321320)	+	(CCTT)n	Simple_repeat	1	69	(0)	802155
1744	17.7	0.3	1.0	chr12	14953990	14954259	(118321050)	C	AluSz	SINE/Alu	(23)	289	20	802154
51	3.9	0.0	0.0	chr12	15012059	15012111	(118263198)	+	(AC)n	Simple_repeat	1	53	(0)	802241
41	9.3	0.0	0.0	chr12	15012112	15012168	(118263141)	+	(GA)n	Simple_repeat	1	57	(0)	802242
768	25.6	9.6	0.4	chr12	15163551	15163797	(118111512)	C	LTR33A	LTR/ERVL	(0)	520	249	802426
598	30.4	3.5	0.5	chr12	15163930	15164121	(118111188)	C	LTR33A	LTR/ERVL	(322)	198	1	802426
293	36.6	9.8	3.9	chr12	15629848	15630154	(117645155)	C	L2	LINE/L2	(878)	2541	2215	803063
25	9.2	0.0	0.0	chr12	15630170	15630204	(117645105)	+	(TC)n	Simple_repeat	1	35	(0)	803064
36	2.9	0.0	0.0	chr12	15630205	15630239	(117645070)	+	(CA)n	Simple_repeat	1	35	(0)	803065
25	22.0	1.4	2.7	chr12	19439621	19439692	(113835617)	+	GA-rich	Low_complexity	1	73	(0)	808199
2012	10.1	0.0	3.6	chr12	23013166	23013474	(110261835)	+	L1PA13	LINE/L1	4562	4859	(1287)	813027
1461	20.6	4.7	5.5	chr12	23013476	23013566	(110261743)	C	MLT1D	LTR/ERVL-MaLR	(163)	342	240	813026
56	3.6	0.0	0.0	chr12	23013567	23013623	(110261686)	+	(TC)n	Simple_repeat	1	57	(0)	813028
1461	20.6	4.7	5.5	chr12	23013624	23013838	(110261471)	C	MLT1D	LTR/ERVL-MaLR	(266)	239	32	813026
30	6.1	0.0	0.0	chr12	23723194	23723228	(109552081)	+	(CT)n	Simple_repeat	1	35	(0)	813959
23	11.8	0.0	2.6	chr12	23790510	23790548	(109484761)	+	(CT)n	Simple_repeat	1	39	(0)	814048
36	0.0	0.0	0.0	chr12	23790549	23790579	(109484730)	+	(CA)n	Simple_repeat	1	31	(0)	814049
15	29.1	5.1	0.0	chr12	23949700	23949731	(109325578)	+	(TC)n	Simple_repeat	1	33	(0)	814233
63	4.6	0.0	0.0	chr12	23949732	23949798	(109325511)	+	(CT)n	Simple_repeat	1	67	(0)	814234
15	29.1	5.1	0.0	chr12	23949799	23949824	(109325485)	+	(TC)n	Simple_repeat	2	29	(0)	814235
38	12.4	1.6	0.0	chr12	25120281	25120342	(108154967)	+	(GA)n	Simple_repeat	1	63	(0)	816001
2737	2.9	0.3	1.3	chr12	25120441	25120751	(108154558)	+	AluYk3	SINE/Alu	1	308	(3)	816002
1523	24.4	8.0	5.1	chr12	25583659	25584188	(107691121)	C	L2	LINE/L2	(354)	3065	2519	816698
65	0.0	0.0	0.0	chr12	25668616	25668670	(107606639)	+	(CT)n	Simple_repeat	1	55	(0)	816797
3623	24.1	5.8	5.1	chr12	25701303	25701623	(107573686)	+	L1MEc	LINE/L1	111	396	(6004)	816848
2218	13.0	0.0	1.3	chr12	25701624	25701939	(107573370)	+	AluSq2	SINE/Alu	1	312	(1)	816850
479	27.2	10.4	8.4	chr12	25730787	25731059	(107544250)	C	LTR33	LTR/ERVL	(2)	513	235	816899
475	33.9	2.8	1.2	chr12	25731071	25731243	(107544066)	C	LTR33	LTR/ERVL	(339)	176	1	816899
353	31.7	1.5	1.2	chr12	25788353	25788500	(107486809)	+	MIRc	SINE/MIR	20	164	(66)	816996
984	7.8	0.0	0.0	chr12	25788520	25788634	(107486675)	+	AluJo	SINE/Alu	3	117	(195)	816997
17	5.0	0.0	0.0	chr12	25788635	25788655	(107486654)	+	(CT)n	Simple_repeat	1	21	(0)	816998
443	29.3	6.9	1.2	chr12	26271121	26271303	(107004006)	+	MIR3	SINE/MIR	5	200	(8)	817736
1850	27.2	5.9	0.8	chr12	26464898	26465508	(106809801)	C	L2c	LINE/L2	(939)	2480	1837	818011
19	28.5	0.0	0.0	chr12	26465586	26465636	(106809673)	+	(TC)n	Simple_repeat	1	51	(0)	818012
188	30.8	12.1	4.0	chr12	26465652	26465803	(106809506)	+	L2c	LINE/L2	3175	3340	(47)	818008
40	17.1	4.2	1.0	chr12	26629671	26629692	(106645617)	+	(TCTC)n	Simple_repeat	1	96	(0)	818254
24	19.5	5.7	0.0	chr12	26629693	26629762	(106645547)	+	(TCTCTG)n	Simple_repeat	1	74	(0)	818255
227	31.2	4.3	5.1	chr12	26629842	26629959	(106645350)	C	L2c	LINE/L2	(5)	3382	3266	818256
15	8.1	0.0	3.6	chr12	26832520	26832547	(106442762)	+	(GCGA)n	Simple_repeat	1	28	(0)	818543
189	20.8	4.0	0.0	chr12	26832755	26832802	(106442507)	+	Tigger19b	DNA/TcMar-Tigger	320	369	(181)	818544
20	15.1	0.0	4.8	chr12	27435525	27435566	(105839743)	+	(CT)n	Simple_repeat	1	42	(0)	819547
226	37.7	3.9	3.5	chr12	27435567	27435794	(105839515)	+	L2b	LINE/L2	1069	1297	(2122)	819548
19	4.3	0.0	0.0	chr12	27952704	27952727	(105322582)	+	(TG)n	Simple_repeat	1	24	(0)	820402
23	12.6	0.0	0.0	chr12	27952727	27952761	(105322548)	+	(GA)n	Simple_repeat	1	35	(0)	820403
412	32.0	3.4	3.9	chr12	27963915	27964119	(105311190)	+	MIR3	SINE/MIR	3	206	(2)	820417
51	0.0	2.1	0.0	chr12	27964235	27964281	(105311028)	+	(TC)n	Simple_repeat	1	48	(0)	820418
30	5.6	0.0	0.0	chr12	27964472	27964509	(105310800)	+	(AG)n	Simple_repeat	1	38	(0)	820419
42	0.0	0.0	0.0	chr12	27974094	27974129	(105301180)	+	(TG)n	Simple_repeat	1	36	(0)	820425
26	0.0	0.0	0.0	chr12	27974130	27974158	(105301151)	+	(AG)n	Simple_repeat	1	29	(0)	820426
5138	15.9	2.0	3.4	chr12	28242099	28242687	(105032622)	C	MER54A	LTR/ERVL	(0)	901	329	820800
2506	12.3	3.0	4.2	chr12	28242688	28243120	(105032189)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	820801
28	4.5	6.1	1.9	chr12	29075378	29075391	(104199918)	+	(AG)n	Simple_repeat	1	15	(0)	821895
31	0.0	0.0	0.0	chr12	29075392	29075418	(104199891)	+	(GT)n	Simple_repeat	1	27	(0)	821896
28	4.5	6.1	1.9	chr12	29075419	29075452	(104199857)	+	(AG)n	Simple_repeat	2	36	(0)	821897
31	7.5	0.0	0.0	chr12	29075597	29075639	(104199670)	+	(TATG)n	Simple_repeat	1	43	(0)	821898
1987	8.5	0.4	0.4	chr12	32033055	32033312	(101241997)	+	AluY	SINE/Alu	47	304	(7)	826637
647	19.0	0.0	0.0	chr12	32033325	32033440	(101241869)	+	BLACKJACK	DNA/hAT-Blackjack	114	229	(2740)	826638
15	9.8	0.0	0.0	chr12	32033441	32033462	(101241847)	+	(TC)n	Simple_repeat	1	22	(0)	826639
755	19.0	0.0	0.0	chr12	32033465	32033585	(101241724)	C	FLAM_A	SINE/Alu	(20)	122	2	826640
571	26.8	0.6	5.6	chr12	32033615	32033792	(101241517)	+	BLACKJACK	DNA/hAT-Blackjack	284	452	(2517)	826641
13	25.4	0.0	2.3	chr12	32106755	32106798	(101168511)	+	(CCCCCCG)n	Simple_repeat	1	44	(0)	826842
13	20.6	4.9	4.7	chr12	32106869	32106959	(101168350)	+	(GCGAGCC)n	Simple_repeat	1	91	(0)	826843
354	27.0	5.9	2.6	chr12	32761720	32761833	(100513476)	C	L2a	LINE/L2	(2)	3424	3307	828074
29	0.0	0.0	0.0	chr12	32898421	32898445	(100376864)	+	(TC)n	Simple_repeat	1	25	(0)	828311
1598	19.3	2.0	2.0	chr12	32946238	32946532	(100328777)	+	AluJb	SINE/Alu	5	299	(13)	828411
4108	9.0	6.9	2.6	chr12	32946664	32947269	(100328040)	+	MER41B	LTR/ERV1	1	634	(0)	828412
2142	10.6	14.0	2.1	chr12	32982391	32982570	(100292739)	C	MSTA	LTR/ERVL-MaLR	(0)	428	206	828474
65	1.7	0.0	0.0	chr12	32982571	32982630	(100292679)	+	(GA)n	Simple_repeat	1	60	(0)	828475
2142	10.6	14.0	2.1	chr12	32982631	32982825	(100292484)	C	MSTA	LTR/ERVL-MaLR	(223)	205	1	828474
2151	12.5	0.0	0.4	chr12	33597567	33597847	(99677462)	+	AluSx1	SINE/Alu	1	280	(32)	829213
36	0.0	0.0	0.0	chr12	33597852	33597882	(99677427)	+	(AG)n	Simple_repeat	1	31	(0)	829214
517	26.5	11.3	1.9	chr12	33597883	33597939	(99677370)	C	LTR50	LTR/ERVL	(207)	588	535	829212
18	8.9	5.6	0.0	chr12	33597941	33597976	(99677333)	+	(AAGC)n	Simple_repeat	1	38	(0)	829215
28	3.3	0.0	0.0	chr12	33597979	33598009	(99677300)	+	(AAGA)n	Simple_repeat	1	31	(0)	829216
1159	21.4	18.2	3.1	chr12	33598015	33598500	(99676809)	C	LTR50	LTR/ERVL	(213)	582	7	829212
1976	19.3	0.5	2.5	chr12	42172635	42173032	(91102277)	+	L1MB8	LINE/L1	5640	6029	(149)	836125
36	8.6	0.0	0.0	chr12	42173033	42173082	(91102227)	+	(AG)n	Simple_repeat	1	50	(0)	836126
800	19.5	0.8	0.0	chr12	42173111	42173238	(91102071)	C	FRAM	SINE/Alu	(30)	146	18	836127
35	0.0	2.8	0.0	chr12	42420670	42420705	(90854604)	+	(CCCTC)n	Simple_repeat	1	37	(0)	836610
17	20.3	0.0	0.0	chr12	42420706	42420723	(90854586)	+	(TC)n	Simple_repeat	2	19	(0)	836611
21	13.5	0.0	0.0	chr12	43836781	43836813	(89438496)	+	(GT)n	Simple_repeat	1	33	(0)	838635
2279	14.4	6.1	2.4	chr12	45635972	45636383	(87638926)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	841120
86	8.4	9.2	0.0	chr12	46125342	46125505	(87149804)	+	GA-rich	Low_complexity	1	179	(0)	841856
313	25.8	3.8	9.2	chr12	46357773	46357913	(86917396)	+	MER5A	DNA/hAT-Charlie	35	167	(22)	842149
11	22.1	3.9	3.8	chr12	46383051	46383101	(86892208)	+	(GCGGAG)n	Simple_repeat	1	53	(0)	842182
16	29.1	1.4	4.0	chr12	46383333	46383405	(86891904)	+	GA-rich	Low_complexity	1	74	(0)	842183
12	18.3	2.4	2.4	chr12	47080763	47080787	(86194522)	+	(TTCTCTC)n	Simple_repeat	1	26	(0)	843080
30	7.5	5.1	1.6	chr12	47080788	47080846	(86194463)	+	(CT)n	Simple_repeat	1	62	(0)	843081
12	18.3	2.4	2.4	chr12	47080847	47080861	(86194448)	+	(TTCTCTC)n	Simple_repeat	6	19	(0)	843082
278	35.4	2.7	2.0	chr12	47182063	47182209	(86093100)	+	CR1-L3A_Croc	LINE/CR1	3752	3899	(389)	843233
2368	11.0	0.7	0.0	chr12	47182315	47182614	(86092695)	+	AluSg	SINE/Alu	3	304	(6)	843234
4142	14.9	1.9	6.9	chr12	47204950	47205677	(86069632)	C	LTR8	LTR/ERV1	(0)	691	1	843276
25	20.2	1.2	6.1	chr12	47205694	47205774	(86069535)	+	GA-rich	Low_complexity	1	82	(0)	843277
5454	9.5	1.0	0.6	chr12	47205794	47206481	(86068828)	C	LTR8	LTR/ERV1	(0)	691	1	843278
393	24.0	7.1	0.0	chr12	47222889	47222992	(86052317)	C	MER94	DNA/hAT-Blackjack	(19)	115	4	843314
20	19.7	2.4	0.0	chr12	47223092	47223133	(86052176)	+	GA-rich	Low_complexity	1	43	(0)	843315
285	35.2	6.5	4.7	chr12	47223278	47223596	(86051713)	C	L2	LINE/L2	(1370)	2049	1725	843312
742	21.6	5.5	9.0	chr12	47355951	47356108	(85919201)	C	L2	LINE/L2	(1097)	2322	2172	843576
485	20.9	4.2	0.8	chr12	47356109	47356244	(85919065)	+	L1ME2	LINE/L1	6039	6178	(1)	843584
19	0.0	4.2	0.0	chr12	47356246	47356269	(85919040)	+	(AG)n	Simple_repeat	1	25	(0)	843585
547	24.3	6.2	2.7	chr12	47356286	47356471	(85918838)	C	L2	LINE/L2	(1300)	2119	1927	843576
580	26.1	8.9	3.7	chr12	47406739	47406967	(85868342)	C	MIRc	SINE/MIR	(1)	267	28	843672
53	0.0	0.0	0.0	chr12	47407050	47407094	(85868215)	+	(AC)n	Simple_repeat	1	45	(0)	843673
24	0.0	0.0	0.0	chr12	47407095	47407120	(85868189)	+	(GA)n	Simple_repeat	1	26	(0)	843674
663	31.2	0.0	4.4	chr12	47541705	47541903	(85733406)	+	MLT1F	LTR/ERVL-MaLR	1	189	(359)	843831
47	0.0	0.0	0.0	chr12	47541904	47541943	(85733366)	+	(TC)n	Simple_repeat	1	40	(0)	843832
663	31.2	0.0	4.4	chr12	47541944	47541991	(85733318)	+	MLT1F	LTR/ERVL-MaLR	190	237	(311)	843831
38	0.0	0.0	0.0	chr12	47728253	47728285	(85547024)	+	(AC)n	Simple_repeat	1	33	(0)	844101
38	0.0	0.0	0.0	chr12	47728289	47728321	(85546988)	+	(AG)n	Simple_repeat	1	33	(0)	844102
207	26.1	11.5	1.4	chr12	47810661	47810730	(85464579)	+	MIRc	SINE/MIR	171	248	(20)	844232
57	5.0	0.0	0.0	chr12	47810805	47810866	(85464443)	+	(TC)n	Simple_repeat	1	62	(0)	844233
14	15.7	5.5	5.2	chr12	48029924	48029978	(85245331)	+	GA-rich	Low_complexity	1	58	(0)	844573
29	6.3	0.0	0.0	chr12	48212621	48212654	(85062655)	+	(TC)n	Simple_repeat	1	34	(0)	844874
54	2.0	0.0	0.0	chr12	48212672	48212722	(85062587)	+	(GT)n	Simple_repeat	1	51	(0)	844875
348	22.4	26.8	1.5	chr12	48446951	48447155	(84828154)	C	L1MEg	LINE/L1	(4561)	1664	1407	845199
685	19.1	12.6	6.3	chr12	48447157	48447212	(84828097)	+	MLT1A	LTR/ERVL-MaLR	136	186	(188)	845201
46	0.0	0.0	0.0	chr12	48447213	48447251	(84828058)	+	(TG)n	Simple_repeat	1	39	(0)	845202
685	19.1	12.6	6.3	chr12	48447252	48447417	(84827892)	+	MLT1A	LTR/ERVL-MaLR	187	374	(0)	845201
1031	14.4	0.0	0.0	chr12	48540259	48540411	(84734898)	C	LTR69	LTR/ERVL	(435)	153	1	845315
553	32.2	5.6	6.8	chr12	48540517	48540822	(84734487)	+	MamGypLTR2b	LTR/Gypsy	535	848	(74)	845316
9061	24.7	2.7	0.7	chr12	48600230	48602220	(84673089)	+	HERVIP10F-int	LTR/ERV1	5705	7735	(2)	845393
31	25.4	2.9	4.9	chr12	48815413	48815551	(84459758)	+	GA-rich	Low_complexity	1	143	(0)	845854
14	29.6	0.0	0.0	chr12	48865597	48865642	(84409667)	+	(AGGC)n	Simple_repeat	1	46	(0)	845931
603	29.8	10.3	5.5	chr12	49223538	49223935	(84051374)	C	MLT1K	LTR/ERVL-MaLR	(161)	434	16	846716
50	2.2	0.0	0.0	chr12	49337717	49337763	(83937546)	+	(GT)n	Simple_repeat	1	47	(0)	846989
35	0.0	0.0	0.0	chr12	49337764	49337793	(83937516)	+	(GA)n	Simple_repeat	1	30	(0)	846990
25	24.8	1.8	9.0	chr12	49337821	49337992	(83937317)	+	(AGAGAC)n	Simple_repeat	1	159	(0)	846991
5502	7.7	2.7	0.6	chr12	49734957	49736004	(83539305)	+	Harlequin-int	LTR/ERV1	263	1410	(5486)	847711
100	16.8	3.6	1.7	chr12	50135086	50135308	(83140001)	+	GA-rich	Low_complexity	1	231	(0)	848486
49	0.0	0.0	0.0	chr12	50135309	50135350	(83139959)	+	(GT)n	Simple_repeat	1	42	(0)	848487
1191	28.8	16.9	1.9	chr12	50240077	50241067	(83034242)	C	L2c	LINE/L2	(230)	3157	1990	848734
1885	20.7	0.5	3.4	chr12	50515927	50516213	(82759096)	C	MLT1A0	LTR/ERVL-MaLR	(0)	432	83	849401
46	7.4	0.0	0.0	chr12	50516214	50516270	(82759039)	+	(TC)n	Simple_repeat	1	57	(0)	849402
1827	15.9	0.7	0.0	chr12	50516276	50516551	(82758758)	C	AluJr	SINE/Alu	(32)	280	3	849403
29	12.5	1.8	1.8	chr12	50589985	50590016	(82685293)	+	(TC)n	Simple_repeat	1	32	(0)	849578
1384	19.7	2.7	2.3	chr12	50590017	50590275	(82685034)	C	AluJo	SINE/Alu	(29)	283	24	849579
1904	14.1	4.9	1.4	chr12	50623105	50623381	(82651928)	+	AluJr	SINE/Alu	1	287	(25)	849649
54	0.0	0.0	0.0	chr12	50623393	50623438	(82651871)	+	(AC)n	Simple_repeat	1	46	(0)	849650
29	2.6	0.0	0.0	chr12	50623439	50623474	(82651835)	+	(TCTC)n	Simple_repeat	4	39	(0)	849651
39	2.7	0.0	0.0	chr12	50623511	50623548	(82651761)	+	(AC)n	Simple_repeat	1	38	(0)	849652
15	0.0	0.0	0.0	chr12	51020596	51020612	(82254697)	+	(TC)n	Simple_repeat	1	17	(0)	850424
1701	15.8	1.8	9.9	chr12	51020634	51020827	(82254482)	+	MER2	DNA/TcMar-Tigger	1	191	(154)	850425
32	0.0	0.0	0.0	chr12	51248400	51248434	(82026875)	+	(AC)n	Simple_repeat	1	35	(0)	850930
49	0.0	0.0	0.0	chr12	51248435	51248476	(82026833)	+	(CT)n	Simple_repeat	1	42	(0)	850931
2371	18.3	6.9	3.7	chr12	51248478	51248770	(82026539)	+	MER21A	LTR/ERVL	24	435	(496)	850932
18	24.6	0.0	5.2	chr12	51874216	51874273	(81401036)	+	GA-rich	Low_complexity	1	58	(0)	852051
1865	17.5	4.1	7.9	chr12	51883310	51883713	(81391596)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	1	852079
1233	30.1	8.7	3.1	chr12	51883714	51884524	(81390785)	+	L1ME3G	LINE/L1	1	570	(354)	852078
387	32.0	2.0	3.2	chr12	51905704	51905858	(81369451)	C	Tigger19b	DNA/TcMar-Tigger	(7)	543	391	852120
43	0.0	0.0	0.0	chr12	52052269	52052305	(81223004)	+	(GT)n	Simple_repeat	1	37	(0)	852368
28	5.8	0.0	0.0	chr12	52052306	52052341	(81222968)	+	(AG)n	Simple_repeat	1	36	(0)	852369
20	17.8	5.9	5.6	chr12	53047081	53047165	(80228144)	+	GA-rich	Low_complexity	1	90	(0)	853986
1505	12.8	10.3	1.7	chr12	53324035	53324327	(79950982)	C	MER1B	DNA/hAT-Charlie	(1)	338	18	854488
49	0.0	0.0	0.0	chr12	53679239	53679280	(79596029)	+	(GA)n	Simple_repeat	1	42	(0)	855242
701	27.5	4.0	1.0	chr12	53679412	53679606	(79595703)	+	MIR3	SINE/MIR	1	201	(7)	855243
23	3.6	0.0	3.2	chr12	53979633	53979655	(79295654)	+	(CT)n	Simple_repeat	1	23	(0)	855728
54	0.0	0.0	0.0	chr12	53979656	53979701	(79295608)	+	(CA)n	Simple_repeat	1	46	(0)	855729
26	18.7	1.6	1.6	chr12	54017343	54017405	(79257904)	+	GA-rich	Low_complexity	1	64	(0)	855760
21	3.8	0.0	3.5	chr12	54063104	54063132	(79212177)	+	(CT)n	Simple_repeat	1	29	(0)	855795
41	0.0	0.0	0.0	chr12	54063133	54063167	(79212142)	+	(CA)n	Simple_repeat	1	35	(0)	855796
2323	9.2	0.0	0.3	chr12	54277210	54277504	(78997805)	C	AluSx1	SINE/Alu	(18)	294	1	856168
2038	11.2	0.3	4.3	chr12	54277505	54277638	(78997671)	C	AluSx1	SINE/Alu	(181)	131	1	856167
12	13.0	8.8	0.0	chr12	54294932	54294965	(78980344)	+	(CCT)n	Simple_repeat	1	37	(0)	856190
699	23.4	7.4	2.7	chr12	54394587	54394806	(78880503)	+	MIR	SINE/MIR	5	235	(27)	856370
879	2.8	0.0	0.0	chr12	54932525	54932632	(78342677)	C	LTR7B	LTR/ERV1	(356)	108	1	857136
313	22.2	0.0	2.7	chr12	54932633	54932706	(78342603)	C	HERVH-int	LTR/ERV1	(0)	7713	7642	857136
1426	13.7	3.3	1.3	chr12	54932720	54932956	(78342353)	C	MER61A	LTR/ERV1	(99)	242	1	857137
48	31.8	4.5	1.8	chr12	55742749	55743013	(77532296)	+	(TC)n	Simple_repeat	1	277	(0)	858161
23	3.7	0.0	0.0	chr12	56010028	56010055	(77265254)	+	(TC)n	Simple_repeat	1	28	(0)	858710
12	31.4	0.0	1.9	chr12	56020985	56021037	(77254272)	+	(CCCT)n	Simple_repeat	1	53	(0)	858729
17	20.5	2.6	0.0	chr12	56021021	56021059	(77254250)	+	(TC)n	Simple_repeat	1	40	(0)	858730
26	10.8	2.4	0.0	chr12	56021254	56021294	(77254015)	+	(CT)n	Simple_repeat	1	42	(0)	858731
30	5.5	2.6	0.0	chr12	56021295	56021332	(77253977)	+	(CA)n	Simple_repeat	1	39	(0)	858732
19	27.9	2.5	2.4	chr12	56080060	56080082	(77195227)	+	(CTCC)n	Simple_repeat	1	32	(50)	858883
18	8.7	0.0	0.0	chr12	56080083	56080107	(77195202)	+	(CT)n	Simple_repeat	1	25	(0)	858884
19	27.9	2.5	2.4	chr12	56080108	56080141	(77195168)	+	(CTCC)n	Simple_repeat	33	82	(0)	858883
2389	8.2	0.0	1.6	chr12	56125786	56126089	(77149220)	C	AluSx	SINE/Alu	(12)	300	2	858946
40	30.4	1.2	3.6	chr12	56521846	56522008	(76753301)	+	(CCTC)n	Simple_repeat	1	165	(0)	859705
12	16.1	0.0	3.3	chr12	56991514	56991543	(76283766)	+	(CCT)n	Simple_repeat	1	30	(0)	860527
18	13.2	0.0	0.0	chr12	57094376	57094408	(76180901)	+	(GAGA)n	Simple_repeat	1	33	(0)	860689
41	0.0	4.8	0.0	chr12	57116427	57116468	(76158841)	+	(TC)n	Simple_repeat	1	44	(0)	860731
761	14.0	3.4	0.0	chr12	57116470	57116583	(76158726)	C	AluJo	SINE/Alu	(194)	118	1	860732
231	32.9	4.4	3.3	chr12	57116584	57116730	(76158579)	C	L2c	LINE/L2	(259)	3128	2981	860733
15	19.2	0.0	4.4	chr12	57215847	57215891	(76059418)	+	(CCACAG)n	Simple_repeat	1	45	(0)	860862
17	27.9	1.3	5.2	chr12	57215910	57216024	(76059285)	+	G-rich	Low_complexity	1	110	(0)	860863
2423	7.7	0.3	0.6	chr12	57521181	57521493	(75753816)	+	AluSz	SINE/Alu	1	312	(0)	861461
41	0.0	0.0	0.0	chr12	57551873	57551907	(75723402)	+	(TC)n	Simple_repeat	1	35	(0)	861498
3052	14.2	7.0	3.7	chr12	57658745	57659309	(75616000)	+	MER57-int	LTR/ERV1	288	872	(5074)	861635
3363	19.2	3.0	0.5	chr12	60144106	60144367	(73130942)	C	MER73	LTR/ERVL	(6)	638	363	864979
42	0.0	0.0	0.0	chr12	60144368	60144403	(73130906)	+	(GA)n	Simple_repeat	1	36	(0)	864980
3363	19.2	3.0	0.5	chr12	60144404	60144762	(73130547)	C	MER73	LTR/ERVL	(282)	362	1	864979
17	5.0	0.0	0.0	chr12	60146565	60146585	(73128724)	+	(GA)n	Simple_repeat	1	21	(0)	864982
509	34.8	14.1	1.7	chr12	62165177	62165833	(71109476)	+	L2	LINE/L2	2023	2774	(645)	867534
31	5.4	0.0	0.0	chr12	62165901	62165939	(71109370)	+	(TC)n	Simple_repeat	1	39	(0)	867535
40	0.0	0.0	0.0	chr12	62165940	62165973	(71109336)	+	(CA)n	Simple_repeat	1	34	(0)	867536
571	31.2	16.9	1.5	chr12	62702137	62702544	(70572765)	C	L3	LINE/CR1	(2737)	1362	870	868345
43	0.0	0.0	0.0	chr12	62702545	62702581	(70572728)	+	(AG)n	Simple_repeat	1	37	(0)	868352
571	31.2	16.9	1.5	chr12	62702582	62702640	(70572669)	C	L3	LINE/CR1	(3230)	869	809	868345
1704	18.9	0.0	1.8	chr12	62839779	62840043	(70435266)	+	AluJr	SINE/Alu	24	283	(29)	868559
47	4.2	0.0	0.0	chr12	62840044	62840092	(70435217)	+	(AG)n	Simple_repeat	1	49	(0)	868560
1704	18.9	0.0	1.8	chr12	62840093	62840107	(70435202)	+	AluJr	SINE/Alu	284	298	(14)	868559
1643	19.2	4.0	2.2	chr12	62840117	62840436	(70434873)	C	MLT1A0	LTR/ERVL-MaLR	(35)	330	5	868561
2336	16.3	3.5	0.7	chr12	64633253	64633666	(68641643)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	871518
36	2.9	0.0	0.0	chr12	65533360	65533394	(67741915)	+	(CT)n	Simple_repeat	1	35	(0)	872929
51	2.1	0.0	0.0	chr12	65639749	65639796	(67635513)	+	(AC)n	Simple_repeat	1	48	(0)	873097
197	24.9	2.4	8.7	chr12	65639922	65640043	(67635266)	+	L2c	LINE/L2	3315	3424	(2)	873098
800	31.4	11.5	3.9	chr12	65738262	65738517	(67536792)	C	L2b	LINE/L2	(633)	2786	2529	873250
73	5.2	0.0	0.0	chr12	65738518	65738597	(67536712)	+	(TC)n	Simple_repeat	1	80	(0)	873253
1955	6.0	0.0	0.0	chr12	65738602	65738833	(67536476)	C	AluY	SINE/Alu	(39)	272	41	873254
67	0.0	1.6	0.0	chr12	65824709	65824769	(67450540)	+	(TC)n	Simple_repeat	1	62	(0)	873413
320	30.9	3.1	0.0	chr12	66533714	66533807	(66741502)	C	MIR3	SINE/MIR	(3)	205	109	874516
46	4.3	0.0	0.0	chr12	66533841	66533888	(66741421)	+	(AC)n	Simple_repeat	1	48	(0)	874517
15	0.0	0.0	0.0	chr12	66533889	66533905	(66741404)	+	(TC)n	Simple_repeat	1	17	(0)	874518
4813	15.9	1.4	4.7	chr12	67146295	67146510	(66128799)	+	MER6	DNA/TcMar-Tigger	50	242	(623)	875482
42	4.7	0.0	0.0	chr12	67146511	67146555	(66128754)	+	(GA)n	Simple_repeat	1	45	(0)	875484
4813	15.9	1.4	4.7	chr12	67146556	67147182	(66128127)	+	MER6	DNA/TcMar-Tigger	243	864	(1)	875482
21	32.9	0.8	4.1	chr12	67269580	67269701	(66005608)	+	(GCGGCG)n	Simple_repeat	1	123	(0)	875650
1460	21.7	1.3	10.0	chr12	68112654	68113063	(65162246)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	876887
33	3.1	0.0	0.0	chr12	68264861	68264893	(65010416)	+	(TC)n	Simple_repeat	1	33	(0)	877088
250	34.0	4.5	0.9	chr12	68266454	68266560	(65008749)	+	L2c	LINE/L2	3199	3309	(78)	877093
51	2.1	0.0	0.0	chr12	68266618	68266665	(65008644)	+	(TC)n	Simple_repeat	1	48	(0)	877094
34	0.0	3.0	0.0	chr12	68266668	68266700	(65008609)	+	(AC)n	Simple_repeat	1	34	(0)	877095
685	30.1	7.3	0.0	chr12	68493977	68494205	(64781104)	+	MIRb	SINE/MIR	10	256	(12)	877481
53	0.0	0.0	0.0	chr12	68494265	68494309	(64781000)	+	(AC)n	Simple_repeat	1	45	(0)	877482
22	0.0	0.0	0.0	chr12	68494310	68494333	(64780976)	+	(GA)n	Simple_repeat	1	24	(0)	877483
20	17.4	7.7	0.0	chr12	68557216	68557267	(64718042)	+	(CT)n	Simple_repeat	1	56	(0)	877596
40	2.6	0.0	0.0	chr12	68557268	68557306	(64718003)	+	(CA)n	Simple_repeat	1	39	(0)	877597
2472	13.7	3.5	3.5	chr12	68591015	68591439	(64683870)	+	MSTA	LTR/ERVL-MaLR	1	425	(3)	877665
18	0.0	8.0	0.0	chr12	68876858	68876882	(64398427)	+	(GT)n	Simple_repeat	1	27	(0)	878271
31	0.0	0.0	0.0	chr12	68876894	68876920	(64398389)	+	(GT)n	Simple_repeat	1	27	(0)	878271
17	0.0	0.0	0.0	chr12	68876921	68876939	(64398370)	+	(AG)n	Simple_repeat	1	19	(0)	878272
251	32.2	8.1	8.7	chr12	68877074	68877359	(64397950)	+	L2b	LINE/L2	3087	3370	(5)	878273
2130	12.2	0.3	0.0	chr12	69152838	69153133	(64122176)	+	AluSz6	SINE/Alu	2	298	(14)	878789
904	17.7	1.2	0.0	chr12	69330827	69330984	(63944325)	C	HERVK22-int	LTR/ERVK	(4348)	2489	2330	879077
1462	23.9	4.0	6.3	chr12	69432296	69432678	(63842631)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	879270
318	38.8	9.6	4.4	chr12	69566887	69567269	(63708040)	+	L2c	LINE/L2	2951	3355	(32)	879524
459	26.8	4.0	13.1	chr12	69567440	69567769	(63707540)	C	L2c	LINE/L2	(27)	3399	3076	879528
223	24.3	2.8	2.8	chr12	69747212	69747283	(63528026)	C	MIR	SINE/MIR	(49)	213	142	879845
46	0.0	0.0	0.0	chr12	69747294	69747332	(63527977)	+	(GT)n	Simple_repeat	1	39	(0)	879846
1298	19.1	9.9	1.2	chr12	69747344	69747600	(63527709)	C	AluJo	SINE/Alu	(30)	282	1	879847
2113	15.2	0.0	0.3	chr12	70548045	70548327	(62726982)	+	AluSz6	SINE/Alu	1	282	(30)	881055
18	0.0	0.0	0.0	chr12	70548328	70548346	(62726963)	+	(TC)n	Simple_repeat	2	20	(0)	881056
46	0.0	0.0	0.0	chr12	70548347	70548385	(62726924)	+	(CA)n	Simple_repeat	1	39	(0)	881057
222	30.3	14.2	1.8	chr12	70548408	70548518	(62726791)	+	MIRc	SINE/MIR	19	145	(123)	881058
1722	17.9	5.7	2.5	chr12	71236238	71236643	(62038666)	C	LTR52	LTR/ERVL	(1)	420	1	882031
817	24.5	8.8	0.4	chr12	71236744	71236987	(62038322)	C	MIR	SINE/MIR	(5)	263	2	882032
240	31.5	7.0	1.9	chr12	72202853	72203111	(61072198)	C	L1MEd	LINE/L1	(6135)	951	679	883519
35	8.3	2.0	0.0	chr12	72203121	72203171	(61072138)	+	(GA)n	Simple_repeat	1	52	(0)	883520
2561	6.0	0.0	2.2	chr12	72203180	72203497	(61071812)	+	AluY	SINE/Alu	1	311	(0)	883521
15	0.0	0.0	0.0	chr12	74349692	74349708	(58925601)	+	(TC)n	Simple_repeat	1	17	(0)	886087
51	0.0	0.0	0.0	chr12	74349713	74349756	(58925553)	+	(GT)n	Simple_repeat	1	44	(0)	886088
13	20.5	5.8	1.8	chr12	74349831	74349882	(58925427)	+	A-rich	Low_complexity	1	55	(0)	886089
389	30.7	12.2	1.8	chr12	75480100	75480268	(57795041)	C	MIRc	SINE/MIR	(63)	205	17	887592
39	6.8	0.0	0.0	chr12	75480286	75480332	(57794977)	+	(CT)n	Simple_repeat	1	47	(0)	887593
23	3.7	0.0	0.0	chr12	75480333	75480360	(57794949)	+	(AC)n	Simple_repeat	1	28	(0)	887594
22	0.0	0.0	0.0	chr12	75528084	75528107	(57747202)	+	(TC)n	Simple_repeat	1	24	(0)	887678
22	0.0	0.0	0.0	chr12	75528107	75528130	(57747179)	+	(CA)n	Simple_repeat	1	24	(0)	887679
254	26.8	10.2	10.9	chr12	75528158	75528295	(57747014)	+	MIRc	SINE/MIR	80	216	(52)	887680
1623	21.2	2.2	4.8	chr12	75699761	75700132	(57575177)	+	MLT1A	LTR/ERVL-MaLR	9	370	(4)	887941
15	12.0	7.3	1.4	chr12	75725052	75725086	(57550223)	+	GA-rich	Low_complexity	1	37	(0)	887981
52	6.4	1.5	0.0	chr12	79890878	79890943	(53384366)	+	(AC)n	Simple_repeat	1	67	(0)	894205
24	9.4	0.0	0.0	chr12	79890945	79890978	(53384331)	+	(TC)n	Simple_repeat	1	34	(0)	894206
521	30.7	9.8	9.4	chr12	79890985	79891398	(53383911)	+	Tigger20a	DNA/TcMar-Tigger	171	586	(387)	894207
43	2.5	0.0	0.0	chr12	89134205	89134245	(44141064)	+	(AC)n	Simple_repeat	1	41	(0)	906526
28	2.6	2.3	4.5	chr12	89134246	89134288	(44141021)	+	(GA)n	Simple_repeat	1	44	(0)	906527
46	0.0	0.0	0.0	chr12	89142885	89142923	(44132386)	+	(GA)n	Simple_repeat	1	39	(0)	906544
998	23.7	11.0	0.7	chr12	89143009	89143310	(44131999)	C	L1ME3B	LINE/L1	(108)	6134	5798	906545
1053	28.2	14.4	2.9	chr12	89164640	89164803	(44110506)	+	MLT1F2	LTR/ERVL-MaLR	3	172	(388)	906576
59	0.0	0.0	0.0	chr12	89164804	89164853	(44110456)	+	(TC)n	Simple_repeat	1	50	(0)	906577
1053	28.2	14.4	2.9	chr12	89164854	89165178	(44110131)	+	MLT1F2	LTR/ERVL-MaLR	173	558	(2)	906576
2947	27.4	8.1	6.6	chr12	89195116	89195578	(44079731)	+	L2a	LINE/L2	2649	3178	(248)	906622
38	8.3	0.0	0.0	chr12	89195579	89195629	(44079680)	+	(CT)n	Simple_repeat	1	51	(0)	906624
1058	27.1	7.9	7.9	chr12	89195630	89195647	(44079662)	+	L2a	LINE/L2	3179	3193	(233)	906622
34	0.0	3.0	0.0	chr12	89195648	89195680	(44079629)	+	(CA)n	Simple_repeat	1	34	(0)	906625
1058	27.1	7.9	7.9	chr12	89195681	89195888	(44079421)	+	L2a	LINE/L2	3194	3380	(46)	906622
1396	26.1	12.6	4.2	chr12	89343031	89343558	(43931751)	+	MLT1G1	LTR/ERVL-MaLR	1	579	(0)	906875
1649	19.4	0.0	0.7	chr12	89381905	89382187	(43893122)	+	AluJo	SINE/Alu	2	282	(30)	906926
724	32.0	1.2	0.8	chr12	89382280	89382534	(43892775)	C	MIR	SINE/MIR	(0)	262	7	906927
17	0.0	0.0	0.0	chr12	89447988	89448006	(43827303)	+	(AG)n	Simple_repeat	1	19	(0)	907037
333	22.5	9.2	2.3	chr12	89658436	89658567	(43616742)	+	LTR79	LTR/ERVL	322	463	(64)	907390
60	1.8	0.0	0.0	chr12	89658599	89658654	(43616655)	+	(GA)n	Simple_repeat	1	56	(0)	907391
18	17.0	10.6	0.0	chr12	91441713	91441778	(41833531)	+	(TGTC)n	Simple_repeat	1	73	(0)	909954
49	0.0	0.0	0.0	chr12	91441949	91441990	(41833319)	+	(TC)n	Simple_repeat	1	42	(0)	909955
2581	13.0	2.8	0.2	chr12	91636733	91637147	(41638162)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	910214
1402	22.4	2.7	10.4	chr12	91993337	91993740	(41281569)	C	MLT1A	LTR/ERVL-MaLR	(2)	372	1	910741
2255	14.0	5.0	0.0	chr12	92226835	92227235	(41048074)	+	MSTA	LTR/ERVL-MaLR	7	428	(0)	911184
340	33.1	2.5	4.1	chr12	92447351	92447473	(40827836)	+	LTR78	LTR/ERV1	271	391	(913)	911561
60	1.8	0.0	0.0	chr12	92447491	92447546	(40827763)	+	(CT)n	Simple_repeat	1	56	(0)	911562
47	0.0	0.0	0.0	chr12	92516138	92516177	(40759132)	+	(TG)n	Simple_repeat	1	40	(0)	911674
34	0.0	0.0	0.0	chr12	92516178	92516214	(40759095)	+	(AG)n	Simple_repeat	1	37	(0)	911675
13	23.6	6.0	0.0	chr12	92929241	92929290	(40346019)	+	(GAGC)n	Simple_repeat	1	53	(0)	912350
25	17.8	1.5	2.9	chr12	93184218	93184258	(40091051)	+	GA-rich	Low_complexity	1	41	(0)	912893
59	1.8	0.0	0.0	chr12	93184259	93184313	(40090996)	+	(GT)n	Simple_repeat	1	55	(0)	912894
25	17.8	1.5	2.9	chr12	93184314	93184339	(40090970)	+	GA-rich	Low_complexity	42	66	(0)	912895
15	28.8	1.7	3.3	chr12	93184470	93184528	(40090781)	+	GA-rich	Low_complexity	1	60	(0)	912896
603	29.9	7.7	1.4	chr12	93185497	93185703	(40089606)	C	MIRb	SINE/MIR	(29)	239	19	912899
20	0.0	0.0	0.0	chr12	93185724	93185745	(40089564)	+	(GT)n	Simple_repeat	1	22	(0)	912900
37	0.0	0.0	0.0	chr12	93185746	93185777	(40089532)	+	(GA)n	Simple_repeat	1	32	(0)	912901
186	30.8	15.2	0.8	chr12	93185795	93185912	(40089397)	C	L3	LINE/CR1	(1516)	2583	2446	912902
358	34.1	3.5	3.5	chr12	93185910	93186052	(40089257)	C	L2c	LINE/L2	(0)	3387	3245	912903
24233	11.7	3.0	5.3	chr12	93250873	93253674	(40021635)	C	HUERS-P1-int	LTR/ERV1	(2326)	3937	1227	913031
34	0.0	0.0	0.0	chr12	93253675	93253703	(40021606)	+	(AG)n	Simple_repeat	1	29	(0)	913035
24233	11.7	3.0	5.3	chr12	93253704	93254932	(40020377)	C	HUERS-P1-int	LTR/ERV1	(5037)	1226	2	913031
73	29.5	2.9	0.0	chr12	93368820	93369063	(39906246)	+	(CTCT)n	Simple_repeat	1	251	(0)	913302
214	32.9	6.0	1.4	chr12	93375256	93375397	(39899912)	C	MIRc	SINE/MIR	(5)	263	115	913319
35	16.6	2.6	2.5	chr12	93375407	93375484	(39899825)	+	(AT)n	Simple_repeat	1	80	(0)	913320
49	0.0	0.0	0.0	chr12	93375485	93375526	(39899783)	+	(AG)n	Simple_repeat	1	42	(0)	913321
2485	15.6	16.2	0.0	chr12	93656509	93656547	(39618762)	C	MLT2B1	LTR/ERVL	(0)	520	453	913905
59	0.0	0.0	0.0	chr12	93656548	93656597	(39618712)	+	(GA)n	Simple_repeat	1	50	(0)	913906
2485	15.6	16.2	0.0	chr12	93656598	93656993	(39618316)	C	MLT2B1	LTR/ERVL	(68)	452	2	913905
2176	18.1	7.5	5.2	chr12	93800048	93800401	(39474908)	C	MLT2B2	LTR/ERVL	(34)	521	151	914145
2054	11.7	8.1	2.2	chr12	93800402	93800759	(39474550)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	914146
1793	14.3	8.1	3.3	chr12	93938222	93938583	(39336726)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	914382
46	2.3	0.0	0.0	chr12	94073901	94073944	(39201365)	+	(GA)n	Simple_repeat	1	44	(0)	914612
2337	15.0	0.8	1.6	chr12	94094398	94094568	(39180741)	C	Tigger2	DNA/TcMar-Tigger	(1)	2717	2549	914650
2121	13.9	3.4	3.9	chr12	94094569	94094737	(39180572)	C	THE1D	LTR/ERVL-MaLR	(0)	381	212	914651
33	0.0	0.0	0.0	chr12	94094738	94094765	(39180544)	+	(GA)n	Simple_repeat	1	28	(0)	914652
2121	13.9	3.4	3.9	chr12	94094766	94094978	(39180331)	C	THE1D	LTR/ERVL-MaLR	(170)	211	1	914651
371	31.9	9.9	5.5	chr12	94132809	94133173	(39142136)	C	L2c	LINE/L2	(796)	2623	2241	914721
74	10.9	0.0	2.2	chr12	94133242	94133376	(39141933)	+	(TC)n	Simple_repeat	1	135	(0)	914726
1912	18.0	7.3	2.9	chr12	94203786	94204163	(39071146)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	914860
1646	12.8	0.0	1.3	chr12	94764006	94764240	(38511069)	+	AluSx1	SINE/Alu	48	279	(33)	915789
88	1.2	1.1	1.1	chr12	94764242	94764328	(38510981)	+	(GA)n	Simple_repeat	1	88	(0)	915790
2133	12.0	0.0	0.0	chr12	95239670	95239945	(38035364)	+	AluSz	SINE/Alu	1	276	(36)	916805
58	7.3	3.4	0.0	chr12	95239946	95240021	(38035288)	+	(GA)n	Simple_repeat	1	78	(0)	916806
61	0.0	0.0	0.0	chr12	95240022	95240076	(38035233)	+	(AAGG)n	Simple_repeat	1	55	(0)	916807
58	7.3	3.4	0.0	chr12	95240077	95240087	(38035222)	+	(GA)n	Simple_repeat	1	12	(0)	916808
667	25.6	0.0	0.8	chr12	95400688	95400820	(37874489)	C	FLAM_C	SINE/Alu	(11)	132	1	917143
2605	13.6	3.7	1.7	chr12	95428465	95428884	(37846425)	C	MSTB1	LTR/ERVL-MaLR	(2)	430	2	917215
36	7.2	0.0	0.0	chr12	96371991	96372034	(36903275)	+	(GT)n	Simple_repeat	1	44	(0)	918928
28	11.5	1.6	4.8	chr12	96400596	96400657	(36874652)	+	G-rich	Low_complexity	1	63	(0)	918978
3598	20.2	14.0	5.2	chr12	96929602	96930151	(36345158)	C	HAL1M8	LINE/L1	(2367)	624	68	919900
66	0.0	0.0	0.0	chr12	96930157	96930212	(36345097)	+	(AC)n	Simple_repeat	1	56	(0)	919903
32	5.2	0.0	0.0	chr12	96930213	96930252	(36345057)	+	(TC)n	Simple_repeat	1	40	(0)	919904
2747	16.5	4.1	4.8	chr12	96930259	96930804	(36344505)	C	MER68	LTR/ERVL	(0)	563	22	919905
33	3.1	0.0	0.0	chr12	100048736	100048768	(33226541)	+	(GA)n	Simple_repeat	1	33	(0)	924766
47	0.0	0.0	0.0	chr12	100048772	100048811	(33226498)	+	(GT)n	Simple_repeat	1	40	(0)	924767
1579	13.7	15.5	2.1	chr12	100108989	100109159	(33166150)	+	THE1D	LTR/ERVL-MaLR	1	188	(193)	924883
65	0.0	0.0	0.0	chr12	100109160	100109214	(33166095)	+	(CT)n	Simple_repeat	1	55	(0)	924884
1579	13.7	15.5	2.1	chr12	100109215	100109371	(33165938)	+	THE1D	LTR/ERVL-MaLR	189	380	(1)	924883
2026	10.4	3.1	2.8	chr12	100130634	100130921	(33144388)	+	AluSq2	SINE/Alu	1	289	(24)	924938
33	0.0	0.0	0.0	chr12	100130922	100130952	(33144357)	+	(ATAC)n	Simple_repeat	1	31	(0)	924939
76	4.0	0.0	0.0	chr12	100130962	100131039	(33144270)	+	(AG)n	Simple_repeat	1	78	(0)	924940
1530	16.4	0.0	0.0	chr12	100131100	100131324	(33143985)	+	AluJb	SINE/Alu	72	296	(16)	924941
38	5.0	0.0	0.0	chr12	101652526	101652567	(31622742)	+	(CT)n	Simple_repeat	1	42	(0)	927714
10231	12.6	3.4	0.9	chr12	101993423	101993683	(31281626)	C	L1MA3	LINE/L1	(5526)	2039	1757	928398
38	0.0	0.0	0.0	chr12	101993684	101993716	(31281593)	+	(TC)n	Simple_repeat	1	33	(0)	928404
10231	12.6	3.4	0.9	chr12	101993717	101994541	(31280768)	C	L1MA3	LINE/L1	(5809)	1756	926	928398
21	7.6	0.0	0.0	chr12	102318390	102318417	(30956892)	+	(TG)n	Simple_repeat	1	28	(0)	928847
57	7.7	2.4	0.0	chr12	102318417	102318498	(30956811)	+	(GA)n	Simple_repeat	1	84	(0)	928848
16	17.1	0.0	0.0	chr12	102427822	102427854	(30847455)	+	GA-rich	Low_complexity	1	33	(0)	929010
19	26.1	5.4	0.0	chr12	104064727	104064800	(29210509)	+	(GGC)n	Simple_repeat	1	78	(0)	931798
1350	22.5	4.0	5.0	chr12	104442907	104443528	(28831781)	+	MLT1D	LTR/ERVL-MaLR	11	627	(0)	932586
25	12.2	0.0	0.0	chr12	104457786	104457822	(28817487)	+	(T)n	Simple_repeat	1	37	(0)	932621
18	4.5	0.0	0.0	chr12	104541108	104541130	(28734179)	+	(TC)n	Simple_repeat	1	23	(0)	932791
35	0.0	0.0	0.0	chr12	104541131	104541160	(28734149)	+	(CA)n	Simple_repeat	1	30	(0)	932792
1776	15.5	15.3	1.9	chr12	104553386	104553568	(28721741)	C	MSTA	LTR/ERVL-MaLR	(2)	426	226	932821
39	2.7	0.0	0.0	chr12	104553569	104553606	(28721703)	+	(GA)n	Simple_repeat	1	38	(0)	932822
1776	15.5	15.3	1.9	chr12	104553607	104553790	(28721519)	C	MSTA	LTR/ERVL-MaLR	(203)	225	1	932821
12	27.7	0.0	2.2	chr12	104603914	104603958	(28671351)	+	(TCAT)n	Simple_repeat	1	45	(0)	932918
31	11.0	2.0	0.0	chr12	104671729	104671777	(28603532)	+	(TC)n	Simple_repeat	1	50	(0)	933063
26	0.0	0.0	0.0	chr12	105357779	105357807	(27917502)	+	(TG)n	Simple_repeat	1	29	(0)	934222
39	0.0	2.7	0.0	chr12	105357808	105357844	(27917465)	+	(GA)n	Simple_repeat	1	38	(0)	934223
1666	19.7	0.0	1.1	chr12	105357863	105358146	(27917163)	C	AluJb	SINE/Alu	(30)	282	2	934224
38	0.0	0.0	0.0	chr12	106075287	106075319	(27199990)	+	(AC)n	Simple_repeat	1	33	(0)	935560
497	27.9	0.0	1.3	chr12	106075436	106075591	(27199718)	+	MIR	SINE/MIR	99	252	(10)	935561
2370	11.8	11.0	0.5	chr12	107900660	107901042	(25374267)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	939039
4679	17.3	1.5	2.1	chr12	108119254	108119544	(25155765)	+	MER54B	LTR/ERVL	1	302	(491)	939504
29	0.0	0.0	0.0	chr12	108119545	108119569	(25155740)	+	(TC)n	Simple_repeat	1	25	(0)	939505
4679	17.3	1.5	2.1	chr12	108119570	108120075	(25155234)	+	MER54B	LTR/ERVL	303	792	(1)	939504
886	26.1	1.7	5.3	chr12	108122690	108122988	(25152321)	+	LTR16B1	LTR/ERVL	180	467	(13)	939514
54	0.0	0.0	0.0	chr12	108130476	108130521	(25144788)	+	(GT)n	Simple_repeat	1	46	(0)	939539
32	3.2	0.0	0.0	chr12	108250778	108250809	(25024500)	+	(AG)n	Simple_repeat	1	32	(0)	939854
2145	10.7	3.8	4.4	chr12	108482987	108483327	(24791982)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	940392
264	18.5	23.5	1.5	chr12	108483340	108483405	(24791904)	+	L2a	LINE/L2	3320	3404	(22)	940393
630	26.3	8.4	11.5	chr12	108483474	108483979	(24791330)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	1	940394
1116	17.4	25.0	1.5	chr12	108617866	108618197	(24657112)	+	MER63B	DNA/hAT-Blackjack	1	436	(0)	940682
496	21.7	6.5	4.3	chr12	108628808	108628975	(24646334)	+	MIR	SINE/MIR	18	193	(69)	940704
301	22.8	0.0	9.2	chr12	108629239	108629325	(24645984)	+	MER81	DNA/hAT-Blackjack	36	114	(0)	940705
1948	13.6	1.7	0.0	chr12	108629430	108629716	(24645593)	+	AluJr	SINE/Alu	2	293	(19)	940706
365	13.7	0.0	0.0	chr12	108736052	108736124	(24539185)	C	L1MD2	LINE/L1	(0)	6359	6287	940871
1167	12.3	0.0	0.0	chr12	108736125	108736278	(24539031)	+	AluSz6	SINE/Alu	137	290	(22)	940872
28	5.9	0.0	0.0	chr12	108736279	108736314	(24538995)	+	(GA)n	Simple_repeat	1	36	(0)	940873
859	15.2	0.8	0.0	chr12	108736324	108736448	(24538861)	+	AluJb	SINE/Alu	1	126	(186)	940874
4163	15.9	3.0	2.7	chr12	108744250	108744549	(24530760)	+	L1MDa	LINE/L1	2010	2315	(4318)	940886
23	14.3	2.2	0.0	chr12	108744550	108744595	(24530714)	+	(AGAT)n	Simple_repeat	1	47	(0)	940890
2236	24.6	8.5	4.1	chr12	108744617	108744864	(24530445)	C	L1MD1	LINE/L1	(5370)	1263	1017	940875
60	24.6	4.4	0.0	chr12	109112135	109112315	(24162994)	+	(TA)n	Simple_repeat	1	189	(0)	941767
290	19.6	19.3	1.1	chr12	110079899	110079991	(23195318)	C	MLT1O	LTR/ERVL-MaLR	(345)	197	84	943961
28	20.3	5.3	0.0	chr12	110080013	110080088	(23195221)	+	GA-rich	Low_complexity	1	80	(0)	943962
334	21.7	10.4	19.5	chr12	110080122	110080265	(23195044)	+	LTR16C	LTR/ERVL	223	343	(146)	943963
55	8.7	0.0	0.0	chr12	110093116	110093190	(23182119)	+	(AG)n	Simple_repeat	1	75	(0)	944000
1935	10.9	4.7	0.4	chr12	111328621	111328887	(21946422)	C	AluSx1	SINE/Alu	(33)	279	1	946821
49	8.5	0.0	0.0	chr12	111328942	111329005	(21946304)	+	(TC)n	Simple_repeat	1	64	(0)	946822
56	15.8	0.0	2.7	chr12	112694552	112694644	(20580665)	+	GA-rich	Low_complexity	1	90	(0)	949876
41	2.6	0.0	0.0	chr12	112694645	112694684	(20580625)	+	(CA)n	Simple_repeat	1	40	(0)	949877
56	15.8	0.0	2.7	chr12	112694685	112694702	(20580607)	+	GA-rich	Low_complexity	91	108	(0)	949878
282	30.4	2.3	9.4	chr12	112694760	112694897	(20580412)	+	MIRb	SINE/MIR	94	221	(47)	949879
21	20.1	6.9	0.0	chr12	113031009	113031066	(20244243)	+	(CT)n	Simple_repeat	1	62	(0)	950624
13	23.3	0.0	2.4	chr12	113221664	113221705	(20053604)	+	G-rich	Low_complexity	1	42	(0)	951099
455	26.3	1.9	0.7	chr12	113356251	113356403	(19918906)	C	L1MC4a	LINE/L1	(2588)	189	35	951372
41	1.9	1.8	0.0	chr12	113356408	113356454	(19918855)	+	(TTTC)n	Simple_repeat	1	48	(0)	951385
61	5.0	0.0	4.4	chr12	113356455	113356545	(19918764)	+	(CTTC)n	Simple_repeat	1	91	(0)	951386
801	18.6	9.5	3.0	chr12	113356555	113356687	(19918622)	C	AluJr	SINE/Alu	(0)	312	167	951387
3282	10.6	5.2	8.3	chr12	113356688	113357265	(19918044)	+	LTR61	LTR/ERV1	1	559	(0)	951388
2161	14.8	12.2	7.9	chr12	113416294	113416498	(19858811)	C	LTR8B	LTR/ERV1	(266)	554	361	951539
1928	17.0	0.7	0.3	chr12	113416499	113416804	(19858505)	C	AluJo	SINE/Alu	(5)	307	1	951540
1675	16.4	6.8	19.3	chr12	113537530	113538021	(19737288)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	951831
941	20.1	5.7	0.5	chr12	113649840	113650039	(19625270)	+	MER20	DNA/hAT-Charlie	1	211	(8)	952133
22	0.0	0.0	0.0	chr12	113675117	113675140	(19600169)	+	(GA)n	Simple_repeat	1	24	(0)	952196
1420	12.8	1.0	0.0	chr12	113686102	113686297	(19589012)	+	AluSx	SINE/Alu	85	282	(30)	952232
35	2.8	0.0	2.6	chr12	113686307	113686345	(19588964)	+	(CA)n	Simple_repeat	1	39	(0)	952233
264	30.9	10.9	1.6	chr12	113686387	113686511	(19588798)	+	MIRb	SINE/MIR	69	206	(62)	952234
12	22.1	0.0	0.0	chr12	113718536	113718567	(19556742)	+	GA-rich	Low_complexity	1	32	(0)	952313
812	20.4	0.0	0.0	chr12	113718579	113718710	(19556599)	C	AluJb	SINE/Alu	(68)	244	113	952314
57	7.0	0.0	0.0	chr12	113718711	113718785	(19556524)	+	(GA)n	Simple_repeat	1	75	(0)	952315
757	26.0	16.1	0.7	chr12	113729742	113730035	(19545274)	+	LTR16C	LTR/ERVL	142	489	(0)	952347
46	0.0	0.0	0.0	chr12	113730152	113730190	(19545119)	+	(TC)n	Simple_repeat	1	39	(0)	952348
33	21.9	4.2	0.0	chr12	113730191	113730219	(19545090)	+	(TGTCTC)n	Simple_repeat	1	78	(24)	952349
31	18.2	1.6	0.0	chr12	113730220	113730281	(19545028)	+	(TC)n	Simple_repeat	1	63	(0)	952350
33	21.9	4.2	0.0	chr12	113730282	113730288	(19545021)	+	(TGTCTC)n	Simple_repeat	79	102	(0)	952349
438	22.4	11.1	9.9	chr12	114370489	114370631	(18904678)	C	MLT1B	LTR/ERVL-MaLR	(57)	333	188	953585
33	3.1	0.0	0.0	chr12	114370632	114370664	(18904645)	+	(TC)n	Simple_repeat	1	33	(0)	953586
438	22.4	11.1	9.9	chr12	114370665	114370743	(18904566)	C	MLT1B	LTR/ERVL-MaLR	(203)	187	108	953585
1056	14.1	0.0	0.0	chr12	114370803	114370958	(18904351)	C	L1PB1	LINE/L1	(17)	6134	5979	953587
37	20.0	1.2	0.0	chr12	114684052	114684132	(18591177)	+	GA-rich	Low_complexity	1	82	(0)	954267
3642	17.4	6.2	9.8	chr12	114882175	114882661	(18392648)	C	L1MB5	LINE/L1	(436)	5738	5288	954798
51	2.1	0.0	0.0	chr12	114882777	114882824	(18392485)	+	(TC)n	Simple_repeat	1	48	(0)	954803
976	18.4	0.0	0.0	chr12	114882826	114882977	(18392332)	C	AluJr	SINE/Alu	(28)	284	133	954804
1497	22.5	8.1	14.2	chr12	115705266	115705851	(17569458)	+	MLT1H	LTR/ERVL-MaLR	3	549	(0)	956606
39	2.3	0.0	0.0	chr12	116120433	116120477	(17154832)	+	(TC)n	Simple_repeat	1	45	(0)	957387
51	0.0	0.0	0.0	chr12	116120478	116120521	(17154788)	+	(CA)n	Simple_repeat	1	44	(0)	957388
18	17.7	0.0	0.0	chr12	116120707	116120738	(17154571)	+	A-rich	Low_complexity	1	32	(0)	957389
258	18.4	0.0	6.0	chr12	116124078	116124193	(17151116)	+	HERVIP10FH-int	LTR/ERV1	778	886	(4216)	957390
4212	6.0	4.2	0.0	chr12	116556050	116556580	(16718729)	C	MER41A	LTR/ERV1	(0)	554	1	958367
408	31.6	1.7	0.0	chr12	116556718	116556834	(16718475)	C	MIRb	SINE/MIR	(125)	143	25	958368
1797	16.4	0.0	2.1	chr12	116708344	116708630	(16566679)	+	AluJb	SINE/Alu	1	281	(31)	958750
31	0.0	0.0	0.0	chr12	116708633	116708659	(16566650)	+	(CT)n	Simple_repeat	1	27	(0)	958751
186	17.2	0.0	0.0	chr12	116708725	116708753	(16566556)	+	MIR	SINE/MIR	224	252	(10)	958752
678	17.5	3.3	2.5	chr12	116916617	116916736	(16358573)	+	FLAM_A	SINE/Alu	1	121	(21)	959285
447	20.4	21.0	0.0	chr12	116916738	116916884	(16358425)	C	MLT1H	LTR/ERVL-MaLR	(29)	520	335	959286
23	3.7	0.0	0.0	chr12	116916885	116916912	(16358397)	+	(TG)n	Simple_repeat	1	28	(0)	959287
17	5.0	0.0	0.0	chr12	116916912	116916932	(16358377)	+	(GA)n	Simple_repeat	1	21	(0)	959288
405	25.0	14.0	5.3	chr12	116917011	116917179	(16358130)	C	MLT1H	LTR/ERVL-MaLR	(303)	186	1	959286
279	21.2	6.1	0.0	chr12	117099045	117099163	(16176146)	C	MIRc	SINE/MIR	(75)	193	56	959563
15	14.4	0.0	0.0	chr12	117577355	117577378	(15697931)	+	(GA)n	Simple_repeat	1	24	(0)	960646
705	27.9	1.0	1.9	chr12	117577426	117577503	(15697806)	C	MIR	SINE/MIR	(32)	230	155	960647
2003	17.1	3.3	3.0	chr12	117577504	117577866	(15697443)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	960648
587	32.7	7.9	2.8	chr12	118098475	118098763	(15176546)	C	L2b	LINE/L2	(34)	3341	3037	961833
34	0.0	0.0	0.0	chr12	118363728	118363756	(14911553)	+	(GT)n	Simple_repeat	1	29	(0)	962432
24	14.9	0.0	0.0	chr12	118363759	118363809	(14911500)	+	(AGAC)n	Simple_repeat	1	51	(0)	962433
2184	9.3	1.3	5.6	chr12	118363840	118364163	(14911146)	+	AluSp	SINE/Alu	1	310	(3)	962434
12	5.5	0.0	0.0	chr12	118372676	118372694	(14902615)	+	(CCG)n	Simple_repeat	1	19	(0)	962447
1695	14.0	0.0	0.0	chr12	118757270	118757504	(14517805)	+	AluSz	SINE/Alu	1	235	(77)	963290
77	29.2	1.7	0.0	chr12	118757505	118757565	(14517744)	+	GA-rich	Low_complexity	182	242	(0)	963291
151	8.6	0.5	0.5	chr12	118757667	118757879	(14517430)	+	(CT)n	Simple_repeat	1	214	(0)	963292
72	15.0	4.0	1.3	chr12	118774705	118774855	(14500454)	+	GA-rich	Low_complexity	1	157	(0)	963330
315	25.0	7.7	1.8	chr12	118774909	118775018	(14500291)	C	L2b	LINE/L2	(15)	3360	3244	963331
268	27.9	4.2	0.0	chr12	119961939	119962006	(13313303)	C	ERV3-16A3_LTR	LTR/ERVL	(122)	300	230	965932
31	0.0	0.0	0.0	chr12	119962008	119962034	(13313275)	+	(TC)n	Simple_repeat	1	27	(0)	965933
2018	14.8	0.3	1.6	chr12	119962035	119962345	(13312964)	C	AluJr	SINE/Alu	(5)	307	1	965934
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
2122	7.6	2.7	1.0	chr12	120292321	120292608	(12982701)	+	AluSg4	SINE/Alu	1	293	(17)	966632
1329	1.4	0.0	0.0	chr12	120293094	120293237	(12982072)	C	U4	snRNA	(1)	144	1	966634
682	24.1	7.9	3.7	chr12	120381576	120381816	(12893493)	C	MIR	SINE/MIR	(9)	253	2	966884
489	28.4	5.2	13.7	chr12	120381817	120382082	(12893227)	+	Chap1_Mam	DNA/hAT-Charlie	101	342	(0)	966883
304	27.8	5.3	2.2	chr12	120382083	120382174	(12893135)	C	MIR3	SINE/MIR	(37)	171	77	966885
1773	14.4	7.5	0.0	chr12	121120912	121121181	(12154128)	+	AluJb	SINE/Alu	1	292	(20)	968616
65	0.0	0.0	0.0	chr12	121121195	121121252	(12154057)	+	(GGAA)n	Simple_repeat	1	58	(0)	968617
472	24.6	12.1	2.3	chr12	121121627	121121797	(12153512)	C	MLT1L	LTR/ERVL-MaLR	(10)	600	411	968618
515	17.9	10.4	18.2	chr12	121128755	121128917	(12146392)	C	LTR16C	LTR/ERVL	(150)	339	198	968633
37	25.0	2.1	0.0	chr12	121128943	121129035	(12146274)	+	(TC)n	Simple_repeat	1	95	(0)	968635
516	27.9	11.5	6.7	chr12	121129037	121129482	(12145827)	+	MLT1O	LTR/ERVL-MaLR	53	522	(20)	968636
34	0.0	0.0	0.0	chr12	121678766	121678794	(11596515)	+	(CT)n	Simple_repeat	1	29	(0)	970030
232	28.4	12.1	1.7	chr12	121678865	121678982	(11596327)	C	MLT1O	LTR/ERVL-MaLR	(296)	246	115	970031
210	31.4	1.4	1.4	chr12	121748864	121748934	(11526375)	C	MIRb	SINE/MIR	(178)	90	20	970250
440	30.1	1.2	4.1	chr12	121844000	121844051	(11431258)	C	MIR	SINE/MIR	(0)	262	214	970442
508	25.7	1.4	3.5	chr12	121889188	121889328	(11385981)	C	MIR	SINE/MIR	(2)	260	123	970593
205	25.5	10.2	13.8	chr12	121933441	121933526	(11341783)	C	L2a	LINE/L2	(580)	2839	2748	970717
1931	15.1	0.0	3.3	chr12	121933527	121933831	(11341478)	+	AluJr	SINE/Alu	1	295	(17)	970718
205	25.5	10.2	13.8	chr12	121933832	121933867	(11341442)	C	L2a	LINE/L2	(672)	2747	2722	970717
841	28.6	11.3	2.6	chr12	122072271	122072736	(11202573)	+	HAL1	LINE/L1	238	749	(1758)	971042
377	24.8	8.6	5.2	chr12	122072811	122072860	(11202449)	+	HAL1	LINE/L1	852	902	(1605)	971042
29	0.0	0.0	0.0	chr12	122072861	122072885	(11202424)	+	(AG)n	Simple_repeat	1	25	(0)	971043
397	22.5	2.0	6.2	chr12	122072886	122073047	(11202262)	+	HAL1	LINE/L1	903	1128	(1337)	971042
324	30.4	11.2	2.2	chr12	122976052	122976249	(10299060)	C	MIRc	SINE/MIR	(5)	225	1	973095
2007	10.2	0.3	1.4	chr12	123711762	123712046	(9563263)	+	AluSx	SINE/Alu	1	282	(30)	974779
22	3.4	0.0	5.9	chr12	123712062	123712095	(9563214)	+	(CA)n	Simple_repeat	1	34	(0)	974780
246	32.1	9.5	4.0	chr12	123807365	123807729	(9467580)	C	L2a	LINE/L2	(182)	3244	2831	974980
2411	12.6	1.8	0.8	chr12	123843968	123844344	(9430965)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	975059
2049	12.7	0.0	0.0	chr12	123895831	123896113	(9379196)	+	AluSx1	SINE/Alu	1	283	(29)	975151
32	0.0	0.0	0.0	chr12	123896114	123896148	(9379161)	+	(CA)n	Simple_repeat	1	35	(0)	975152
55	0.0	0.0	0.0	chr12	123896149	123896195	(9379114)	+	(AG)n	Simple_repeat	1	47	(0)	975153
2253	7.6	0.3	0.7	chr12	124258173	124258474	(9016835)	+	AluSq2	SINE/Alu	1	301	(12)	975777
29	27.9	5.1	2.1	chr12	124258475	124258542	(9016767)	+	GA-rich	Low_complexity	72	140	(0)	975778
340	33.6	7.3	6.6	chr12	124259057	124259422	(9015887)	+	L1MC4	LINE/L1	2098	2466	(3749)	975780
868	21.2	4.0	2.2	chr12	124487428	124487774	(8787535)	+	MER31B	LTR/ERV1	1	466	(0)	976141
18	0.0	0.0	0.0	chr12	124487874	124487893	(8787416)	+	(A)n	Simple_repeat	1	20	(0)	976142
14	27.4	0.0	2.0	chr12	124487894	124487923	(8787386)	+	A-rich	Low_complexity	1	50	(0)	976143
1185	17.4	13.2	10.9	chr12	124776147	124776484	(8498825)	+	MLT1B	LTR/ERVL-MaLR	1	350	(40)	976810
193	24.5	11.7	0.0	chr12	124910736	124910788	(8364521)	C	L3	LINE/CR1	(198)	3901	3842	977135
46	26.9	3.1	1.2	chr12	125161257	125161304	(8114005)	+	(CTCTCT)n	Simple_repeat	1	136	(43)	977676
48	22.2	2.6	0.0	chr12	125161305	125161419	(8113890)	+	(CT)n	Simple_repeat	1	118	(0)	977677
46	26.9	3.1	1.2	chr12	125161420	125161432	(8113877)	+	(CTCTCT)n	Simple_repeat	137	179	(0)	977676
1070	5.7	0.0	0.0	chr12	125161435	125161557	(8113752)	C	AluYj4	SINE/Alu	(1)	310	188	977678
23	10.5	3.6	3.5	chr12	125186267	125186314	(8088995)	+	(GCCCCG)n	Simple_repeat	1	48	(0)	977731
44	2.1	2.1	0.0	chr12	125186315	125186362	(8088947)	+	(CTC)n	Simple_repeat	1	49	(0)	977732
21	9.4	0.0	0.0	chr12	125186369	125186402	(8088907)	+	(CGCT)n	Simple_repeat	1	34	(0)	977733
36	24.0	2.7	1.8	chr12	125186406	125186516	(8088793)	+	(GGC)n	Simple_repeat	1	114	(0)	977734
77	2.6	1.3	0.0	chr12	125706425	125706502	(7568807)	+	(AG)n	Simple_repeat	1	79	(0)	978595
65	0.0	0.0	0.0	chr12	126781537	126781591	(6493718)	+	(CT)n	Simple_repeat	1	55	(0)	980388
107	29.8	4.7	0.5	chr12	126898489	126898896	(6376413)	+	GA-rich	Low_complexity	1	427	(0)	980582
19	28.6	0.0	1.8	chr12	126899125	126899181	(6376128)	+	(TG)n	Simple_repeat	1	57	(0)	980583
3989	13.4	2.0	0.2	chr12	126907913	126908534	(6366775)	C	MER41B	LTR/ERV1	(0)	634	1	980595
1675	15.3	5.5	7.0	chr12	129232649	129233035	(4042274)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	984707
2424	21.0	0.8	0.4	chr12	129653684	129654175	(3621134)	C	L1MC3	LINE/L1	(1)	7784	7291	985430
373	15.2	0.1	0.8	chr12	129654178	129654245	(3621064)	C	L1MC3	LINE/L1	(925)	6957	6870	985430
29	6.1	0.0	0.0	chr12	129654246	129654279	(3621030)	+	(TC)n	Simple_repeat	1	34	(0)	985431
41	2.5	0.0	0.0	chr12	129654280	129654319	(3620990)	+	(GT)n	Simple_repeat	1	40	(0)	985432
326	18.7	1.3	7.4	chr12	129654320	129654330	(3620979)	C	L1MC3	LINE/L1	(990)	6892	6883	985430
442	26.4	7.7	8.1	chr12	129654331	129654553	(3620756)	C	MER106B	DNA/hAT-Charlie	(13)	1046	896	985433
16	0.0	0.0	0.0	chr12	129660158	129660175	(3615134)	+	(AG)n	Simple_repeat	1	18	(0)	985442
1674	26.5	10.9	6.6	chr12	130855599	130855763	(2419546)	C	LTR8B	LTR/ERV1	(381)	439	283	987335
2484	8.2	0.0	0.0	chr12	130855764	130856066	(2419243)	C	AluY	SINE/Alu	(8)	303	1	987338
71	18.2	3.4	2.7	chr12	131285298	131285474	(1989835)	+	(TC)n	Simple_repeat	1	183	(0)	987947
4197	13.9	2.4	1.9	chr12	131362184	131362814	(1912495)	C	MER41B	LTR/ERV1	(0)	634	1	988030
2023	29.7	4.3	5.0	chr12	131362815	131362842	(1912467)	+	L1MC5a	LINE/L1	2448	2472	(305)	988027
2089	15.9	3.3	0.3	chr12	131362843	131363196	(1912113)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	988031
2023	29.7	4.3	5.0	chr12	131363197	131363342	(1911967)	+	L1MC5a	LINE/L1	2473	2620	(157)	988027
4577	10.4	1.9	0.3	chr12	131553055	131553678	(1721631)	C	MER41B	LTR/ERV1	(0)	634	1	988272
2882	14.4	13.7	1.3	chr12	131605084	131605637	(1669672)	C	MER41B	LTR/ERV1	(0)	634	1	988331
80	14.9	5.3	3.6	chr12	131680979	131681186	(1594123)	+	GA-rich	Low_complexity	1	219	(0)	988442
235	26.8	2.3	9.9	chr12	131681187	131681327	(1593982)	+	MLT1K	LTR/ERVL-MaLR	399	528	(67)	988443
235	24.1	1.3	0.7	chr12	132422672	132423266	(852043)	+	(CTCT)n	Simple_repeat	1	603	(0)	989438
253	23.7	0.0	2.6	chr12	132470909	132470986	(804323)	C	PRIMA4-int	LTR/ERV1	(7691)	579	504	989507
17	28.9	0.0	0.0	chr12	132470992	132471032	(804277)	+	(AC)n	Simple_repeat	1	41	(0)	989508
22	7.2	0.0	0.0	chr12	132471069	132471097	(804212)	+	(GA)n	Simple_repeat	1	29	(0)	989509
795	24.0	6.9	0.4	chr12	132471099	132471109	(804200)	+	L1MA9	LINE/L1	5815	5825	(487)	989499
29	5.2	2.5	0.0	chr12	132471110	132471149	(804160)	+	(AGGGC)n	Simple_repeat	1	41	(0)	989510
795	24.0	6.9	0.4	chr12	132471150	132471409	(803900)	+	L1MA9	LINE/L1	5826	6104	(208)	989499
27	0.0	0.0	0.0	chr12	132828740	132828765	(446544)	+	(GCGGGA)n	Simple_repeat	1	26	(0)	990001
825	16.5	4.1	4.7	chr13	20119424	20119572	(94244756)	+	AluJb	SINE/Alu	137	286	(26)	993782
50	0.0	0.0	0.0	chr13	20119573	20119615	(94244713)	+	(AC)n	Simple_repeat	1	43	(0)	993783
825	16.5	4.1	4.7	chr13	20119616	20119635	(94244693)	+	AluJb	SINE/Alu	287	305	(7)	993782
430	29.1	9.9	11.5	chr13	20119655	20119984	(94244344)	+	L2b	LINE/L2	3052	3375	(0)	993784
887	18.5	3.3	2.6	chr13	23787184	23787405	(90576923)	C	MLT1A0	LTR/ERVL-MaLR	(2)	430	162	999321
32	2.5	2.5	0.0	chr13	23787406	23787445	(90576883)	+	(GA)n	Simple_repeat	1	41	(0)	999322
421	16.1	2.1	1.1	chr13	23787473	23787566	(90576762)	C	MLT1A0	LTR/ERVL-MaLR	(213)	152	58	999321
2329	17.6	2.4	4.4	chr13	24182281	24182715	(90181613)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	999929
67	6.3	1.2	0.0	chr13	24270993	24271075	(90093253)	+	(CT)n	Simple_repeat	1	84	(0)	1000057
970	25.7	5.0	0.7	chr13	25574233	25574538	(88789790)	+	MER46C	DNA/TcMar-Tigger	1	320	(18)	1002048
947	34.8	3.1	4.8	chr13	26247089	26247583	(88116745)	+	L2a	LINE/L2	1099	1584	(1835)	1002962
1333	28.3	5.2	2.2	chr13	26247614	26248075	(88116253)	+	MLT1H	LTR/ERVL-MaLR	71	547	(2)	1002963
398	27.3	8.3	0.7	chr13	26323002	26323129	(88041199)	C	L1ME5	LINE/L1	(0)	6194	6054	1003081
1150	15.5	8.6	19.9	chr13	26323130	26323556	(88040772)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	1003082
55	8.6	0.0	0.0	chr13	27005229	27005302	(87359026)	+	(TC)n	Simple_repeat	1	74	(0)	1004149
49	2.0	2.0	0.0	chr13	27981009	27981058	(86383270)	+	(TC)n	Simple_repeat	1	51	(0)	1005842
18	28.0	0.0	1.6	chr13	28138293	28138354	(86225974)	+	(CCTGCC)n	Simple_repeat	1	62	(0)	1006216
713	28.7	10.9	6.6	chr13	28568081	28568490	(85795838)	+	MLT1K	LTR/ERVL-MaLR	6	435	(160)	1006962
57	8.4	0.0	0.0	chr13	30374695	30374770	(83989558)	+	(TC)n	Simple_repeat	1	76	(0)	1009563
1930	12.1	0.3	3.5	chr13	30374776	30375065	(83989263)	C	AluJo	SINE/Alu	(31)	281	1	1009564
2268	18.2	6.9	14.2	chr13	38090817	38091480	(76272848)	C	LTR9	LTR/ERV1	(0)	612	1	1020815
181	34.4	13.3	3.0	chr13	40401485	40401787	(73962541)	C	L2b	LINE/L2	(1117)	2302	1964	1024056
36	0.0	0.0	0.0	chr13	40401836	40401866	(73962462)	+	(TC)n	Simple_repeat	1	31	(0)	1024061
2914	14.0	1.2	0.9	chr13	41136616	41136829	(73227499)	+	MSTB	LTR/ERVL-MaLR	1	215	(211)	1025325
30	2.8	5.4	0.0	chr13	41136830	41136866	(73227462)	+	(TC)n	Simple_repeat	1	39	(0)	1025326
2914	14.0	1.2	0.9	chr13	41136867	41137076	(73227252)	+	MSTB	LTR/ERVL-MaLR	216	425	(1)	1025325
1281	21.9	8.6	4.7	chr13	41723067	41723468	(72640860)	+	LTR40b	LTR/ERVL	44	462	(0)	1026266
19	0.0	0.0	0.0	chr13	42026363	42026383	(72337945)	+	(TG)n	Simple_repeat	1	21	(0)	1026731
54	0.0	0.0	0.0	chr13	42026384	42026429	(72337899)	+	(GA)n	Simple_repeat	1	46	(0)	1026732
1898	15.8	0.0	0.0	chr13	42026430	42026707	(72337621)	C	AluJb	SINE/Alu	(34)	278	1	1026733
15	23.3	4.8	0.0	chr13	42056797	42056838	(72307490)	+	(CT)n	Simple_repeat	1	44	(0)	1026777
2667	23.1	10.7	8.8	chr13	42278419	42280021	(72084307)	C	L1MEc	LINE/L1	(4211)	2189	553	1027123
262	27.0	11.0	0.7	chr13	42365152	42365289	(71999039)	C	L1M5	LINE/L1	(1922)	4224	4071	1027253
44	2.4	0.0	0.0	chr13	42365333	42365374	(71998954)	+	(CA)n	Simple_repeat	1	42	(0)	1027255
24	0.0	0.0	0.0	chr13	42365375	42365400	(71998928)	+	(GA)n	Simple_repeat	1	26	(0)	1027256
266	29.4	7.4	2.3	chr13	42365407	42365625	(71998703)	C	L1M5	LINE/L1	(2147)	3999	3769	1027253
248	34.9	3.6	8.8	chr13	42882616	42882819	(71481509)	+	L2	LINE/L2	2659	2851	(568)	1028049
35	0.0	0.0	0.0	chr13	42882911	42882940	(71481388)	+	(CT)n	Simple_repeat	1	30	(0)	1028050
25	0.0	0.0	0.0	chr13	42882941	42882968	(71481360)	+	(GT)n	Simple_repeat	1	28	(0)	1028051
236	23.8	2.3	5.6	chr13	42882987	42883075	(71481253)	+	L2a	LINE/L2	3332	3417	(9)	1028052
23	7.0	0.0	0.0	chr13	44886986	44887015	(69477313)	+	(GA)n	Simple_repeat	1	30	(0)	1031142
56	0.0	0.0	0.0	chr13	44887016	44887063	(69477265)	+	(GT)n	Simple_repeat	1	48	(0)	1031143
21	0.0	0.0	0.0	chr13	45396324	45396346	(68967982)	+	(GA)n	Simple_repeat	1	23	(0)	1032203
34	0.0	0.0	0.0	chr13	45657176	45657204	(68707124)	+	(TC)n	Simple_repeat	1	29	(0)	1032629
2286	12.5	13.7	1.3	chr13	45660438	45660809	(68703519)	C	MSTA	LTR/ERVL-MaLR	(0)	428	4	1032634
28	14.8	3.8	0.0	chr13	46179968	46180020	(68184308)	+	(TC)n	Simple_repeat	1	55	(0)	1033472
263	25.7	9.2	2.5	chr13	46180138	46180320	(68184008)	+	MIRb	SINE/MIR	34	268	(0)	1033473
4422	26.5	9.5	4.4	chr13	46199860	46200750	(68163578)	C	L2a	LINE/L2	(1155)	2264	1351	1033504
4280	2.5	0.0	0.0	chr13	46284021	46284531	(68079797)	+	SVA_A	Retroposon/SVA	877	1387	(0)	1033616
1841	19.7	6.5	10.1	chr13	48220006	48220195	(66144133)	+	MLT1D	LTR/ERVL-MaLR	1	198	(307)	1036492
34	3.0	0.0	0.0	chr13	48220196	48220229	(66144099)	+	(TC)n	Simple_repeat	1	34	(0)	1036493
1841	19.7	6.5	10.1	chr13	48220230	48220563	(66143765)	+	MLT1D	LTR/ERVL-MaLR	199	505	(0)	1036492
2610	28.1	13.0	5.3	chr13	48492016	48493225	(65871103)	+	L2a	LINE/L2	1348	2747	(672)	1036897
41	0.0	0.0	0.0	chr13	48493226	48493260	(65871068)	+	(CA)n	Simple_repeat	1	35	(0)	1036898
2610	28.1	13.0	5.3	chr13	48493261	48493315	(65871013)	+	L2a	LINE/L2	2748	2758	(661)	1036897
48	3.6	3.5	0.0	chr13	48493316	48493372	(65870956)	+	(CT)n	Simple_repeat	1	59	(0)	1036899
2610	25.3	11.6	3.4	chr13	48493373	48493962	(65870366)	+	L2a	LINE/L2	2759	3426	(0)	1036897
742	19.8	7.0	0.7	chr13	48785778	48785943	(65578385)	+	MLT1B	LTR/ERVL-MaLR	1	174	(200)	1037328
59	0.0	0.0	0.0	chr13	48785944	48785993	(65578335)	+	(TC)n	Simple_repeat	1	50	(0)	1037329
718	24.6	5.4	1.7	chr13	48785994	48786004	(65578324)	+	MLT1B	LTR/ERVL-MaLR	175	185	(189)	1037328
22	0.0	0.0	0.0	chr13	50091772	50091795	(64272533)	+	(GA)n	Simple_repeat	1	24	(0)	1039613
51	0.0	0.0	0.0	chr13	50091796	50091839	(64272489)	+	(GT)n	Simple_repeat	1	44	(0)	1039614
595	33.8	14.1	3.5	chr13	50091853	50092390	(64271938)	C	L2	LINE/L2	(906)	2513	1916	1039615
13	6.5	12.1	0.0	chr13	51452737	51452769	(62911559)	+	(CCTG)n	Simple_repeat	1	37	(0)	1041602
14	28.3	0.0	5.6	chr13	51452898	51452968	(62911360)	+	(GGAGTGG)n	Simple_repeat	1	71	(0)	1041603
1574	21.2	10.4	15.1	chr13	51499131	51499707	(62864621)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	2	1041681
1307	25.5	1.4	3.2	chr13	51549498	51549873	(62814455)	+	MLT1A	LTR/ERVL-MaLR	1	369	(5)	1041758
22	9.7	2.9	0.0	chr13	52203966	52203999	(62160329)	+	(AG)n	Simple_repeat	1	35	(0)	1042773
24	0.0	0.0	0.0	chr13	60162784	60162809	(54201519)	+	(CT)n	Simple_repeat	1	26	(0)	1053082
42	0.0	0.0	0.0	chr13	60162810	60162845	(54201483)	+	(CA)n	Simple_repeat	1	36	(0)	1053083
713	25.4	17.3	5.8	chr13	66076395	66076653	(48287675)	+	MLT2B1	LTR/ERVL	170	464	(56)	1060589
512	12.9	0.0	1.2	chr13	66076679	66076764	(48287564)	C	ERVL-B4-int	LTR/ERVL	(5605)	109	25	1060590
12126	18.4	3.6	1.5	chr13	66076763	66079447	(48284881)	+	ERVL-B4-int	LTR/ERVL	766	3506	(2208)	1060591
1400	27.8	10.8	4.9	chr13	69626083	69626465	(44737863)	C	L1MEc	LINE/L1	(5624)	776	377	1065024
35	0.0	0.0	0.0	chr13	69626466	69626495	(44737833)	+	(TG)n	Simple_repeat	1	30	(0)	1065025
1400	27.8	10.8	4.9	chr13	69626496	69626804	(44737524)	C	L1MEc	LINE/L1	(6024)	376	38	1065024
2537	23.1	8.2	5.9	chr13	79584160	79585044	(34779284)	+	L1MCb	LINE/L1	1	907	(5138)	1079151
282	14.9	0.0	0.0	chr13	79585076	79585122	(34779206)	C	MLT1G1	LTR/ERVL-MaLR	(301)	294	248	1079152
421	23.0	24.1	5.4	chr13	79585171	79585374	(34778954)	C	MLT1G1	LTR/ERVL-MaLR	(335)	244	3	1079152
12	34.1	1.6	0.0	chr13	80339824	80339837	(34024491)	+	A-rich	Low_complexity	2	63	(0)	1080202
20	0.0	4.0	0.0	chr13	80627313	80627337	(33736991)	+	(TC)n	Simple_repeat	1	26	(0)	1080558
30	8.3	0.0	0.0	chr13	80627338	80627376	(33736952)	+	(TG)n	Simple_repeat	1	39	(0)	1080559
1015	1.6	3.9	0.0	chr13	80789293	80789417	(33574911)	C	L1PA5	LINE/L1	(5)	6149	6020	1080735
818	31.5	7.3	7.7	chr13	90110978	90112735	(24251593)	+	L1M4	LINE/L1	3427	5227	(919)	1092519
3206	26.9	8.5	2.5	chr13	90336417	90339011	(24025317)	+	L1MA4	LINE/L1	640	3075	(3770)	1092797
348	42.5	3.3	2.1	chr13	90611121	90611358	(23752970)	C	L1MEd	LINE/L1	(6470)	616	376	1093135
640	34.6	4.4	2.1	chr13	90611416	90611704	(23752624)	+	LTR16A1	LTR/ERVL	1	296	(160)	1093136
882	24.6	6.3	6.5	chr13	90612819	90613261	(23751067)	C	LTR35B	LTR/ERV1	(0)	605	164	1093139
2032	8.9	0.0	0.0	chr13	90620895	90621140	(23743188)	+	AluSx	SINE/Alu	30	275	(37)	1093146
35	0.0	0.0	0.0	chr13	90621142	90621171	(23743157)	+	(TC)n	Simple_repeat	1	30	(0)	1093147
85	21.7	0.0	0.6	chr13	90621173	90621343	(23742985)	+	(AT)n	Simple_repeat	1	171	(0)	1093148
294	38.7	2.1	3.5	chr13	90798442	90798583	(23565745)	C	MIRc	SINE/MIR	(116)	152	13	1093403
4136	10.8	0.3	0.0	chr13	90930735	90931325	(23433003)	+	L1PREC2	LINE/L1	5564	6156	(4)	1093553
1543	22.8	8.0	2.3	chr13	90990020	90990148	(23374180)	+	LTR40b	LTR/ERVL	1	150	(312)	1093617
63	0.0	0.0	0.0	chr13	90990149	90990202	(23374126)	+	(TC)n	Simple_repeat	1	54	(0)	1093618
1543	22.8	8.0	2.3	chr13	90990203	90990507	(23373821)	+	LTR40b	LTR/ERVL	151	462	(0)	1093617
1060	24.7	5.9	14.3	chr13	91149643	91149850	(23214478)	+	L1ME3A	LINE/L1	2524	2690	(3456)	1093849
1825	12.2	9.4	1.4	chr13	91149851	91150031	(23214297)	+	THE1D	LTR/ERVL-MaLR	1	210	(171)	1093855
49	2.2	0.0	0.0	chr13	91150032	91150077	(23214251)	+	(TC)n	Simple_repeat	1	46	(0)	1093856
1825	12.2	9.4	1.4	chr13	91150078	91150245	(23214083)	+	THE1D	LTR/ERVL-MaLR	211	380	(1)	1093855
213	28.9	2.9	18.2	chr13	91174062	91174205	(23190123)	+	MER5B	DNA/hAT-Charlie	57	174	(4)	1093883
997	17.9	2.6	1.1	chr13	91174216	91174401	(23189927)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	1093885
5896	18.6	5.8	2.4	chr13	91261818	91263512	(23100816)	C	L1ME1	LINE/L1	(306)	6642	4878	1094012
4896	22.1	2.9	1.9	chr13	91263513	91265680	(23098648)	C	L1ME1	LINE/L1	(2866)	4049	1854	1094012
2146	22.5	5.3	7.6	chr13	91309126	91309971	(23054357)	+	L1M8	LINE/L1	974	1799	(556)	1094086
75	9.4	3.4	0.0	chr13	91384777	91384893	(22979435)	+	(GA)n	Simple_repeat	1	121	(0)	1094173
408	29.2	12.0	4.2	chr13	91530258	91530425	(22833903)	+	MER63A	DNA/hAT-Blackjack	2	184	(26)	1094374
2354	10.1	0.3	0.0	chr13	91697144	91697440	(22666888)	C	AluSx4	SINE/Alu	(12)	298	1	1094622
1253	29.6	17.4	4.7	chr13	91742261	91743533	(22620795)	C	Charlie24	DNA/hAT-Charlie	(1)	2449	982	1094684
1654	31.1	4.6	3.8	chr13	91743553	91744467	(22619861)	C	Charlie24	DNA/hAT-Charlie	(1523)	927	6	1094684
294	32.0	8.0	5.2	chr13	92322248	92322514	(22041814)	+	L1M6	LINE/L1	773	1047	(5449)	1095419
185	23.7	0.0	0.0	chr13	92322597	92322634	(22041694)	+	L2a	LINE/L2	3376	3413	(13)	1095420
746	35.2	10.4	0.4	chr13	92479060	92479580	(21884748)	C	L2	LINE/L2	(1003)	2416	1838	1095624
13	16.6	0.0	0.0	chr13	92479588	92479614	(21884714)	+	(TCC)n	Simple_repeat	1	27	(0)	1095625
1477	20.8	7.4	1.2	chr13	94387571	94387730	(19976598)	+	MLT1A0	LTR/ERVL-MaLR	1	176	(189)	1098219
41	0.0	0.0	0.0	chr13	94387731	94387765	(19976563)	+	(TC)n	Simple_repeat	1	35	(0)	1098220
1477	20.8	7.4	1.2	chr13	94387766	94387945	(19976383)	+	MLT1A0	LTR/ERVL-MaLR	177	363	(2)	1098219
902	16.5	1.2	6.3	chr13	94387946	94388044	(19976284)	C	MER5A1	DNA/hAT-Charlie	(70)	96	1	1098218
21	0.0	0.0	0.0	chr13	94659114	94659136	(19705192)	+	(AG)n	Simple_repeat	1	23	(0)	1098685
607	21.3	12.8	2.0	chr13	94659222	94659374	(19704954)	C	Arthur1A	DNA/hAT-Tip100	(2)	175	4	1098686
24	0.0	0.0	0.0	chr13	94674365	94674391	(19689937)	+	(GT)n	Simple_repeat	1	27	(0)	1098706
39	4.0	1.9	1.8	chr13	94674391	94674444	(19689884)	+	(GA)n	Simple_repeat	1	55	(0)	1098707
29	25.7	2.3	0.0	chr13	94860994	94861081	(19503247)	+	GA-rich	Low_complexity	1	90	(0)	1099029
316	22.1	8.9	9.6	chr13	95563040	95563095	(18801233)	+	MIR	SINE/MIR	63	122	(140)	1100342
47	0.0	0.0	0.0	chr13	95563096	95563135	(18801193)	+	(CT)n	Simple_repeat	1	40	(0)	1100343
316	22.1	8.9	9.6	chr13	95563136	95563203	(18801125)	+	MIR	SINE/MIR	123	186	(76)	1100342
33	0.0	3.1	0.0	chr13	95563204	95563235	(18801093)	+	(AG)n	Simple_repeat	1	33	(0)	1100344
59	7.2	0.0	0.0	chr13	96765578	96765650	(17598678)	+	(CT)n	Simple_repeat	1	73	(0)	1102056
1169	27.9	12.4	2.1	chr13	97259912	97260653	(17103675)	C	L2a	LINE/L2	(6)	3420	2573	1102727
301	23.4	2.9	3.8	chr13	98110857	98110941	(16253387)	C	MLT1A	LTR/ERVL-MaLR	(119)	271	173	1104097
40	7.4	0.0	3.3	chr13	98110942	98111002	(16253326)	+	(AG)n	Simple_repeat	1	61	(0)	1104098
862	19.8	1.8	1.2	chr13	98111006	98111174	(16253154)	C	MLT1A	LTR/ERVL-MaLR	(200)	174	5	1104097
31	0.0	0.0	0.0	chr13	98999291	98999317	(15365011)	+	(CA)n	Simple_repeat	1	27	(0)	1105538
17	0.0	0.0	0.0	chr13	98999318	98999336	(15364992)	+	(TC)n	Simple_repeat	1	19	(0)	1105539
29	0.0	0.0	0.0	chr13	99686513	99686537	(14677791)	+	(AG)n	Simple_repeat	1	25	(0)	1106668
1906	20.6	17.2	2.9	chr13	108347686	108348398	(6015930)	C	L1MC3	LINE/L1	(166)	7619	6859	1118648
29	7.8	0.0	0.0	chr13	108348412	108348423	(6015905)	+	(TG)n	Simple_repeat	1	12	(0)	1118650
36	0.0	0.0	0.0	chr13	108348424	108348454	(6015874)	+	(TC)n	Simple_repeat	1	31	(0)	1118651
29	7.8	0.0	0.0	chr13	108348455	108348483	(6015845)	+	(TG)n	Simple_repeat	1	29	(0)	1118652
14	18.2	0.0	0.0	chr13	108672766	108672796	(5691532)	+	GA-rich	Low_complexity	1	31	(0)	1119102
125	14.2	6.0	0.7	chr13	111033221	111033488	(3330840)	+	GA-rich	Low_complexity	1	284	(0)	1122073
1765	17.3	8.2	0.6	chr13	113154796	113154988	(1209340)	+	MSTD	LTR/ERVL-MaLR	1	215	(181)	1124253
40	0.0	0.0	0.0	chr13	113154989	113155022	(1209306)	+	(TC)n	Simple_repeat	1	34	(0)	1124254
1765	17.3	8.2	0.6	chr13	113155023	113155189	(1209139)	+	MSTD	LTR/ERVL-MaLR	216	390	(6)	1124253
379	22.1	1.9	3.7	chr13	113557690	113557797	(806531)	+	MER54B	LTR/ERVL	221	326	(467)	1124855
1863	20.9	3.0	10.9	chr13	113557924	113558466	(805862)	+	MER54B	LTR/ERVL	295	793	(0)	1124855
15	26.3	5.5	3.1	chr13	113584448	113584538	(779790)	+	(CGCACG)n	Simple_repeat	1	96	(0)	1124892
16	21.4	2.3	0.0	chr13	113584581	113584623	(779705)	+	GA-rich	Low_complexity	1	44	(0)	1124893
1856	6.7	9.7	2.6	chr13	114280990	114281258	(83070)	+	AluSz	SINE/Alu	1	290	(22)	1125452
2181	14.1	10.5	1.5	chr14	20256074	20256462	(86787256)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1127739
75	28.6	2.4	2.6	chr14	20816783	20816902	(86226816)	+	GA-rich	Low_complexity	1	120	(0)	1128655
46	0.0	0.0	0.0	chr14	20816903	20816941	(86226777)	+	(AG)n	Simple_repeat	1	39	(0)	1128656
30	0.0	0.0	0.0	chr14	20816947	20816972	(86226746)	+	(AC)n	Simple_repeat	1	26	(0)	1128657
75	28.6	2.4	2.6	chr14	20816973	20817142	(86226576)	+	GA-rich	Low_complexity	126	295	(0)	1128658
37	2.9	0.0	0.0	chr14	20857069	20857104	(86186614)	+	(TC)n	Simple_repeat	1	36	(0)	1128716
18	0.0	4.3	0.0	chr14	20857105	20857127	(86186591)	+	(AC)n	Simple_repeat	1	24	(0)	1128717
26	15.2	3.9	0.0	chr14	21537081	21537131	(85506587)	+	(CT)n	Simple_repeat	1	53	(0)	1129952
391	21.7	0.0	7.8	chr14	21647510	21647599	(85396119)	C	MLT1F	LTR/ERVL-MaLR	(189)	380	298	1130189
49	2.2	0.0	0.0	chr14	21647611	21647656	(85396062)	+	(AG)n	Simple_repeat	1	46	(0)	1130190
40	0.0	2.6	0.0	chr14	22457169	22457206	(84586512)	+	(TC)n	Simple_repeat	1	39	(0)	1131204
60	0.0	0.0	0.0	chr14	22643715	22643765	(84399953)	+	(AC)n	Simple_repeat	1	51	(0)	1131456
31	2.8	0.0	0.0	chr14	22643766	22643802	(84399916)	+	(GA)n	Simple_repeat	1	37	(0)	1131457
230	27.9	2.3	3.4	chr14	22643818	22643906	(84399812)	+	CR1_Mam	LINE/CR1	2047	2134	(70)	1131458
180	32.5	11.2	2.6	chr14	22829193	22829288	(84214430)	+	L2a	LINE/L2	3286	3390	(36)	1131796
1488	12.6	0.0	0.5	chr14	22829291	22829497	(84214221)	C	AluJb	SINE/Alu	(22)	290	85	1131798
17	11.8	5.3	0.0	chr14	23160942	23160979	(83882739)	+	(CTTTCT)n	Simple_repeat	1	40	(0)	1132384
36	16.6	1.4	0.0	chr14	23306778	23306847	(83736871)	+	(CCCT)n	Simple_repeat	1	71	(0)	1132675
61	0.0	0.0	0.0	chr14	23928142	23928193	(83115525)	+	(TC)n	Simple_repeat	1	52	(0)	1133550
590	22.9	7.7	3.8	chr14	23928356	23928541	(83115177)	+	MIRc	SINE/MIR	36	229	(39)	1133551
34	0.0	0.0	0.0	chr14	23937301	23937329	(83106389)	+	(CA)n	Simple_repeat	1	29	(0)	1133564
25	0.0	0.0	0.0	chr14	23937330	23937357	(83106361)	+	(TC)n	Simple_repeat	1	28	(0)	1133565
639	27.7	8.8	6.3	chr14	23937376	23937815	(83105903)	C	LTR16A2	LTR/ERVL	(12)	483	1	1133566
317	31.5	13.4	4.2	chr14	24011021	24011214	(83032504)	C	L1MEd	LINE/L1	(5881)	1205	1006	1133651
30	6.1	0.0	0.0	chr14	24011215	24011249	(83032469)	+	(TC)n	Simple_repeat	1	35	(0)	1133652
317	31.5	13.4	4.2	chr14	24011250	24011385	(83032333)	C	L1MEd	LINE/L1	(6081)	1005	841	1133651
24	18.7	0.0	0.0	chr14	24080025	24080068	(82963650)	+	(TC)n	Simple_repeat	1	44	(0)	1133716
1020	23.0	11.1	1.5	chr14	25095596	25095832	(81947886)	C	Arthur1C	DNA/hAT-Tip100	(99)	264	1	1135084
22	19.0	4.3	4.1	chr14	25095936	25096012	(81947706)	+	GA-rich	Low_complexity	1	77	(0)	1135086
34	5.6	0.0	0.0	chr14	25096023	25096060	(81947658)	+	(TG)n	Simple_repeat	1	38	(0)	1135087
1972	13.4	13.1	1.6	chr14	30296852	30297229	(76746489)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1141627
57	5.8	0.0	0.0	chr14	32938453	32938524	(74105194)	+	(GA)n	Simple_repeat	1	72	(0)	1145777
21	22.3	2.8	2.7	chr14	32938734	32938804	(74104914)	+	G-rich	Low_complexity	1	73	(0)	1145778
24	0.0	0.0	3.3	chr14	33990008	33990037	(73053681)	+	(TG)n	Simple_repeat	1	30	(0)	1147024
33	3.1	0.0	0.0	chr14	33990038	33990070	(73053648)	+	(GA)n	Simple_repeat	1	33	(0)	1147025
13	15.9	0.0	0.0	chr14	34874153	34874180	(72169538)	+	G-rich	Low_complexity	1	28	(0)	1148821
1998	11.2	14.3	4.4	chr14	35359719	35360060	(71683658)	+	MSTA	LTR/ERVL-MaLR	1	395	(33)	1149873
3104	15.8	2.8	6.9	chr14	36971138	36971776	(70071942)	+	LTR9	LTR/ERV1	1	612	(0)	1152286
50	0.0	2.2	0.0	chr14	50053614	50053659	(56990059)	+	(GA)n	Simple_repeat	1	47	(0)	1169176
22	19.6	0.0	0.0	chr14	50093579	50093625	(56950093)	+	(CTCT)n	Simple_repeat	1	47	(0)	1169252
20	0.0	0.0	0.0	chr14	51102744	51102765	(55940953)	+	(CT)n	Simple_repeat	1	22	(0)	1170962
55	0.0	0.0	0.0	chr14	51102766	51102812	(55940906)	+	(CA)n	Simple_repeat	1	47	(0)	1170963
2001	23.5	5.2	3.1	chr14	51102839	51103989	(55939729)	C	L1M4c	LINE/L1	(3458)	2918	1219	1170964
2375	12.9	20.2	4.1	chr14	53273554	53274064	(53769654)	C	LTR18B	LTR/ERVL	(0)	614	1	1174315
37	16.7	3.4	1.9	chr14	54489439	54489579	(52554139)	+	(TC)n	Simple_repeat	1	143	(0)	1175998
1992	13.8	0.7	1.1	chr14	54489580	54489854	(52553864)	C	AluJr	SINE/Alu	(38)	274	1	1175999
17	0.0	0.0	0.0	chr14	54737543	54737561	(52306157)	+	(T)n	Simple_repeat	1	19	(0)	1176387
2292	10.4	0.3	0.0	chr14	55370642	55370940	(51672778)	C	AluSx1	SINE/Alu	(12)	300	1	1177561
19	16.5	0.0	0.0	chr14	58239452	58239485	(48804233)	+	GA-rich	Low_complexity	1	34	(0)	1181895
1864	15.2	14.0	1.1	chr14	58339664	58339843	(48703875)	C	MSTA	LTR/ERVL-MaLR	(0)	428	227	1182067
36	0.0	0.0	0.0	chr14	58339844	58339874	(48703844)	+	(GA)n	Simple_repeat	1	31	(0)	1182068
1864	15.2	14.0	1.1	chr14	58339875	58340065	(48703653)	C	MSTA	LTR/ERVL-MaLR	(202)	226	1	1182067
19908	12.8	3.1	1.8	chr14	59385688	59387891	(47655827)	C	L1MA3	LINE/L1	(3603)	3962	1753	1183637
68	0.0	0.0	0.0	chr14	59387892	59387949	(47655769)	+	(TG)n	Simple_repeat	1	58	(0)	1183645
19908	13.1	2.5	1.9	chr14	59387950	59389556	(47654162)	C	L1MA3	LINE/L1	(5813)	1752	129	1183637
358	21.4	0.0	3.3	chr14	60331179	60331270	(46712448)	C	MER20B	DNA/hAT-Charlie	(639)	144	56	1184900
17	0.0	0.0	0.0	chr14	60331296	60331313	(46712405)	+	(CA)n	Simple_repeat	1	18	(0)	1184901
30	0.0	0.0	0.0	chr14	60331314	60331339	(46712379)	+	(CT)n	Simple_repeat	1	26	(0)	1184902
24	16.2	4.1	0.0	chr14	61189503	61189551	(45854167)	+	(TC)n	Simple_repeat	1	51	(0)	1186119
29	20.5	0.0	4.9	chr14	61189576	61189657	(45854061)	+	(TTCC)n	Simple_repeat	1	82	(0)	1186120
15	25.6	2.6	0.0	chr14	61562883	61562921	(45480797)	+	(TC)n	Simple_repeat	1	40	(0)	1186687
1680	20.1	0.0	1.0	chr14	63626836	63627124	(43416594)	+	AluJo	SINE/Alu	1	286	(26)	1189651
391	30.9	10.7	7.1	chr14	63627125	63627150	(43416568)	+	L1ME3G	LINE/L1	272	294	(630)	1189649
41	0.0	2.6	0.0	chr14	63627151	63627189	(43416529)	+	(CT)n	Simple_repeat	1	40	(0)	1189652
391	30.9	10.7	7.1	chr14	63627190	63627436	(43416282)	+	L1ME3G	LINE/L1	295	566	(358)	1189649
2101	10.3	7.0	0.0	chr14	64362980	64363270	(42680448)	+	AluSp	SINE/Alu	1	313	(0)	1191134
4404	11.3	1.9	0.2	chr14	64363425	64364047	(42679671)	+	MER41B	LTR/ERV1	1	634	(0)	1191135
19	10.4	5.1	6.5	chr14	64504805	64504863	(42538855)	+	(CCGCGCG)n	Simple_repeat	1	62	(0)	1191410
71	0.0	0.0	0.0	chr14	64704385	64704447	(42339271)	+	(CTCCCTCG)n	Simple_repeat	1	63	(0)	1191799
21	0.0	0.0	0.0	chr14	64822352	64822374	(42221344)	+	(TC)n	Simple_repeat	1	23	(0)	1191942
33	0.0	0.0	0.0	chr14	64822375	64822402	(42221316)	+	(CA)n	Simple_repeat	1	28	(0)	1191943
27	6.0	0.0	0.0	chr14	65102446	65102480	(41941238)	+	(CACT)n	Simple_repeat	1	35	(0)	1192407
17	0.0	4.2	0.0	chr14	65102481	65102495	(41941223)	+	(CA)n	Simple_repeat	1	16	(0)	1192408
421	28.1	5.0	0.0	chr14	65243844	65243957	(41799761)	+	L2a	LINE/L2	3307	3426	(0)	1192727
712	32.2	10.2	10.9	chr14	65243958	65244602	(41799116)	C	L2c	LINE/L2	(0)	2290	1600	1192726
41	2.2	4.3	0.0	chr14	65433772	65433818	(41609900)	+	(CT)n	Simple_repeat	1	49	(0)	1193167
874	22.9	0.0	0.0	chr14	65433819	65433962	(41609756)	C	FAM	SINE/Alu	(41)	144	1	1193168
487	22.4	20.4	0.0	chr14	67418434	67418678	(39625040)	+	MLT1I	LTR/ERVL-MaLR	59	366	(45)	1196015
48	0.0	0.0	0.0	chr14	68156456	68156496	(38887222)	+	(TC)n	Simple_repeat	1	41	(0)	1197302
41	6.4	0.0	0.0	chr14	68342552	68342600	(38701118)	+	(TC)n	Simple_repeat	1	49	(0)	1197563
20	24.3	0.0	0.0	chr14	68594243	68594287	(38449431)	+	GA-rich	Low_complexity	1	45	(0)	1197939
1255	19.2	12.9	0.0	chr14	68594464	68594713	(38449005)	C	AluJr4	SINE/Alu	(10)	302	16	1197940
83	21.6	0.0	1.1	chr14	68736191	68736367	(38307351)	+	GA-rich	Low_complexity	1	177	(0)	1198171
22	3.8	0.0	0.0	chr14	70250060	70250086	(36793632)	+	(AG)n	Simple_repeat	1	27	(0)	1200917
120	26.7	6.7	0.8	chr14	70822242	70822735	(36220983)	+	(CT)n	Simple_repeat	1	527	(0)	1201805
2244	14.0	2.8	11.2	chr14	70880851	70881045	(36162673)	C	MSTB	LTR/ERVL-MaLR	(237)	189	1	1201913
939	17.8	7.3	1.5	chr14	70881046	70881099	(36162619)	+	MLT1B	LTR/ERVL-MaLR	134	203	(187)	1201912
72	1.5	0.0	0.0	chr14	70881100	70881165	(36162553)	+	(TC)n	Simple_repeat	1	66	(0)	1201915
939	17.8	7.3	1.5	chr14	70881166	70881315	(36162403)	+	MLT1B	LTR/ERVL-MaLR	204	351	(39)	1201912
2208	9.8	1.0	0.0	chr14	72451755	72452049	(34591669)	C	AluSx3	SINE/Alu	(13)	298	1	1204319
35	0.0	0.0	0.0	chr14	72452225	72452254	(34591464)	+	(TC)n	Simple_repeat	1	30	(0)	1204320
25	6.5	0.0	0.0	chr14	72608889	72608921	(34434797)	+	(TC)n	Simple_repeat	1	33	(0)	1204535
185	27.1	0.0	6.3	chr14	72826023	72826085	(34217633)	+	L3	LINE/CR1	4039	4097	(2)	1204892
787	26.0	1.4	1.0	chr14	73162210	73162415	(33881303)	+	L1ME4b	LINE/L1	126	332	(560)	1205659
27	16.7	0.0	0.0	chr14	73162418	73162464	(33881254)	+	(CT)n	Simple_repeat	1	47	(0)	1205660
24	21.1	0.0	3.5	chr14	73162468	73162525	(33881193)	+	GA-rich	Low_complexity	1	58	(0)	1205661
719	22.4	3.4	0.7	chr14	73162526	73162668	(33881050)	+	AluJb	SINE/Alu	150	296	(16)	1205662
817	18.7	0.7	0.0	chr14	74042672	74042805	(33000913)	+	AluJr	SINE/Alu	146	280	(32)	1207674
33	8.0	3.8	0.0	chr14	74042808	74042860	(33000858)	+	(TC)n	Simple_repeat	1	55	(0)	1207675
51	2.1	0.0	0.0	chr14	74042864	74042911	(33000807)	+	(AC)n	Simple_repeat	1	48	(0)	1207676
53	4.6	0.0	0.0	chr14	74244862	74244881	(32798837)	+	(GA)n	Simple_repeat	1	20	(0)	1208096
66	10.6	0.0	0.0	chr14	74244882	74244982	(32798736)	+	(GT)n	Simple_repeat	1	101	(0)	1208097
53	4.6	0.0	0.0	chr14	74244983	74245029	(32798689)	+	(GA)n	Simple_repeat	1	47	(0)	1208098
2282	10.2	0.0	1.6	chr14	75068008	75068312	(31975406)	+	AluSq	SINE/Alu	1	300	(13)	1209668
18	3.3	2.9	5.6	chr14	75068331	75068365	(31975353)	+	(AAAAC)n	Simple_repeat	1	36	(0)	1209669
60	15.9	4.1	0.0	chr14	75068468	75068588	(31975130)	+	GA-rich	Low_complexity	1	126	(0)	1209670
1267	16.9	17.1	0.0	chr14	75517014	75517256	(31526462)	C	AluJb	SINE/Alu	(19)	293	1	1210612
2306	20.4	11.4	2.3	chr14	75517257	75517307	(31526411)	+	MLT1F1	LTR/ERVL-MaLR	111	179	(390)	1210611
51	2.1	0.0	0.0	chr14	75517308	75517355	(31526363)	+	(CT)n	Simple_repeat	1	48	(0)	1210613
2306	20.4	11.4	2.3	chr14	75517356	75517709	(31526009)	+	MLT1F1	LTR/ERVL-MaLR	180	568	(1)	1210611
41	30.0	2.4	2.3	chr14	75981843	75982011	(31061707)	+	(TC)n	Simple_repeat	1	173	(0)	1211417
153	0.5	5.6	0.0	chr14	76564713	76564908	(30478810)	+	(AG)n	Simple_repeat	1	207	(0)	1212480
990	19.2	3.5	1.1	chr14	76720166	76720366	(30323352)	C	MER34	LTR/ERV1	(322)	263	11	1212835
16	27.2	4.5	5.1	chr14	76720585	76720696	(30323022)	+	G-rich	Low_complexity	1	117	(0)	1212836
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
53	0.0	0.0	0.0	chr14	77406591	77406635	(29637083)	+	(AC)n	Simple_repeat	1	45	(0)	1214142
31	3.3	0.0	0.0	chr14	78250947	78250977	(28792741)	+	(AG)n	Simple_repeat	1	31	(0)	1215907
42	13.6	2.7	0.0	chr14	78610001	78610074	(28433644)	+	GA-rich	Low_complexity	1	76	(0)	1216508
17	4.2	0.0	0.0	chr14	78627080	78627104	(28416614)	+	(TCCC)n	Simple_repeat	1	25	(0)	1216540
47	0.0	0.0	0.0	chr14	78627105	78627144	(28416574)	+	(TC)n	Simple_repeat	1	40	(0)	1216541
2820	18.4	5.8	1.7	chr14	81439373	81439564	(25604154)	+	MER6A	DNA/TcMar-Tigger	1	220	(385)	1220629
53	0.0	0.0	0.0	chr14	81439565	81439609	(25604109)	+	(TG)n	Simple_repeat	1	45	(0)	1220630
2820	18.4	5.8	1.7	chr14	81439610	81439996	(25603722)	+	MER6A	DNA/TcMar-Tigger	221	605	(0)	1220629
181	35.2	1.9	3.7	chr14	81450825	81450933	(25592785)	C	MER5A	DNA/hAT-Charlie	(11)	178	72	1220655
41	2.5	0.0	0.0	chr14	81450954	81450993	(25592725)	+	(GA)n	Simple_repeat	1	40	(0)	1220656
1929	17.6	0.4	0.0	chr14	81450995	81451272	(25592446)	C	AluJr	SINE/Alu	(33)	279	1	1220657
794	27.7	24.5	1.8	chr14	81510008	81510455	(25533263)	C	L2a	LINE/L2	(1126)	2293	1740	1220744
50	0.0	0.0	0.0	chr14	81510473	81510515	(25533203)	+	(TC)n	Simple_repeat	1	43	(0)	1220750
2206	17.4	4.7	1.0	chr14	88030074	88030275	(19013443)	+	MSTB1	LTR/ERVL-MaLR	2	220	(212)	1229849
30	0.0	6.1	0.0	chr14	88030276	88030308	(19013410)	+	(TC)n	Simple_repeat	1	35	(0)	1229850
2206	17.4	4.7	1.0	chr14	88030309	88030518	(19013200)	+	MSTB1	LTR/ERVL-MaLR	221	430	(2)	1229849
1713	18.5	4.8	6.0	chr14	88990832	88991211	(18052507)	C	MLT1B	LTR/ERVL-MaLR	(15)	375	1	1231333
4870	19.2	2.2	3.0	chr14	89855498	89856176	(17187542)	C	L1MA9	LINE/L1	(38)	6274	5601	1232849
2062	18.2	0.0	0.3	chr14	89856177	89856484	(17187234)	C	AluJb	SINE/Alu	(0)	312	6	1232850
232	36.6	11.4	4.8	chr14	90461511	90461803	(16581915)	C	L2b	LINE/L2	(2)	3373	3059	1233967
35	9.9	0.0	0.0	chr14	90461890	90461943	(16581775)	+	(ACAC)n	Simple_repeat	1	54	(0)	1233968
46	0.0	0.0	0.0	chr14	90461944	90461982	(16581736)	+	(AG)n	Simple_repeat	1	39	(0)	1233969
47	0.0	0.0	0.0	chr14	91108488	91108527	(15935191)	+	(TG)n	Simple_repeat	1	40	(0)	1235065
26	0.0	0.0	0.0	chr14	91108528	91108556	(15935162)	+	(AG)n	Simple_repeat	1	29	(0)	1235066
2023	13.5	0.4	0.0	chr14	91108557	91108837	(15934881)	C	AluSx	SINE/Alu	(30)	282	1	1235067
1039	17.0	4.9	0.5	chr14	92758929	92759123	(14284595)	+	MLT1D	LTR/ERVL-MaLR	21	224	(281)	1238182
3475	13.4	5.9	4.8	chr14	92759124	92759728	(14283990)	C	LTR9	LTR/ERV1	(0)	612	1	1238183
1051	23.4	5.8	3.1	chr14	93173945	93174415	(13869303)	+	MLT1F2	LTR/ERVL-MaLR	9	591	(0)	1239004
18	15.3	5.3	0.0	chr14	95414648	95414685	(11629033)	+	(CT)n	Simple_repeat	1	40	(0)	1242971
54	0.0	0.0	0.0	chr14	95414687	95414732	(11628986)	+	(AC)n	Simple_repeat	1	46	(0)	1242972
8106	5.1	2.4	1.4	chr14	95426966	95427566	(11616152)	+	LTR13	LTR/ERVK	96	709	(298)	1242996
29	6.3	0.0	0.0	chr14	95427567	95427600	(11616118)	+	(CT)n	Simple_repeat	1	34	(0)	1242998
8106	5.1	2.4	1.4	chr14	95427601	95427899	(11615819)	+	LTR13	LTR/ERVK	710	1006	(1)	1242996
725	22.6	11.4	2.6	chr14	96368560	96368831	(10674887)	+	MSTB1	LTR/ERVL-MaLR	1	299	(133)	1244747
6953	19.7	8.8	0.7	chr14	96368833	96369708	(10674010)	+	MSTB1-int	LTR/ERVL-MaLR	1	940	(711)	1244748
225	26.1	9.8	0.0	chr14	96797937	96798047	(10245671)	C	L2a	LINE/L2	(218)	3208	3086	1245552
1209	33.5	10.1	5.0	chr14	96807157	96807832	(10235886)	C	L3	LINE/CR1	(123)	3976	3263	1245572
44	0.0	0.0	0.0	chr14	96808018	96808055	(10235663)	+	(TG)n	Simple_repeat	1	38	(0)	1245573
217	34.9	3.8	2.3	chr14	96808065	96808193	(10235525)	C	L2	LINE/L2	(1158)	2261	2131	1245574
2857	18.7	2.7	3.0	chr14	97032197	97032796	(10010922)	+	L1MB5	LINE/L1	5560	6157	(17)	1245948
34	3.0	0.0	0.0	chr14	97032799	97032832	(10010886)	+	(TC)n	Simple_repeat	1	34	(0)	1245949
59	1.9	0.0	0.0	chr14	97032849	97032903	(10010815)	+	(AG)n	Simple_repeat	1	55	(0)	1245950
4694	20.2	9.8	9.3	chr14	99294848	99295147	(7748571)	+	L1MC4	LINE/L1	7523	7897	(145)	1249797
59	0.0	0.0	0.0	chr14	99295157	99295206	(7748512)	+	(GA)n	Simple_repeat	1	50	(0)	1249799
1907	10.0	6.3	6.9	chr14	99295241	99295409	(7748309)	+	THE1B	LTR/ERVL-MaLR	1	163	(201)	1249800
34	13.9	0.0	0.0	chr14	99362263	99362291	(7681427)	+	(CT)n	Simple_repeat	1	29	(0)	1249935
50	0.0	0.0	0.0	chr14	99362292	99362334	(7681384)	+	(TG)n	Simple_repeat	1	43	(0)	1249936
34	13.9	0.0	0.0	chr14	99362335	99362361	(7681357)	+	(CT)n	Simple_repeat	2	28	(0)	1249937
17	0.0	0.0	0.0	chr14	99362361	99362379	(7681339)	+	(CA)n	Simple_repeat	1	19	(0)	1249938
518	23.4	0.0	0.0	chr14	99362400	99362506	(7681212)	+	L2a	LINE/L2	3314	3420	(6)	1249939
43	10.8	1.4	0.0	chr14	100007765	100007834	(7035884)	+	(AGAG)n	Simple_repeat	1	71	(0)	1251005
1052	17.9	5.5	3.3	chr14	100007885	100008098	(7035620)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1251006
364	31.1	6.7	4.3	chr14	100079365	100079552	(6964166)	C	L2c	LINE/L2	(2)	3385	3193	1251152
15	30.4	0.0	0.0	chr14	100376199	100376250	(6667468)	+	(TCCC)n	Simple_repeat	1	52	(0)	1251757
66	4.9	1.2	0.0	chr14	100617400	100617484	(6426234)	+	(GA)n	Simple_repeat	1	86	(0)	1252154
42	0.0	0.0	0.0	chr14	100621255	100621290	(6422428)	+	(TG)n	Simple_repeat	1	36	(0)	1252159
43	0.0	0.0	0.0	chr14	100621327	100621363	(6422355)	+	(GT)n	Simple_repeat	1	37	(0)	1252160
1436	10.3	18.6	0.0	chr14	100621364	100621586	(6422132)	C	AluSq	SINE/Alu	(33)	280	7	1252161
3506	13.9	4.3	0.0	chr14	101688283	101688837	(5354881)	+	LTR19B	LTR/ERV1	1	580	(0)	1253496
331	28.3	4.5	0.0	chr14	101817767	101817872	(5225846)	+	MIR	SINE/MIR	135	245	(17)	1253696
432	29.4	8.9	1.7	chr14	101817893	101818131	(5225587)	C	CR1_Mam	LINE/CR1	(470)	1734	1477	1253697
345	29.0	8.7	3.1	chr14	102690634	102690913	(4352805)	+	L2a	LINE/L2	3084	3385	(2)	1255502
931	31.6	3.7	1.7	chr14	103140193	103140613	(3903105)	+	L1ME4b	LINE/L1	231	660	(232)	1256258
34	0.0	0.0	0.0	chr14	103140627	103140655	(3903063)	+	(GA)n	Simple_repeat	1	29	(0)	1256259
1756	16.5	0.4	3.2	chr14	103356696	103357022	(3686696)	C	AluJb	SINE/Alu	(0)	312	7	1256631
1430	23.1	3.0	7.5	chr14	103357023	103357050	(3686668)	+	MLT1A	LTR/ERVL-MaLR	182	189	(185)	1256630
100	2.4	6.9	0.0	chr14	103357051	103357180	(3686538)	+	(TC)n	Simple_repeat	1	139	(0)	1256632
1430	23.1	3.0	7.5	chr14	103357181	103357360	(3686358)	+	MLT1A	LTR/ERVL-MaLR	190	369	(5)	1256630
3817	11.5	0.9	1.1	chr14	103427526	103428035	(3615683)	C	MER41B	LTR/ERV1	(129)	505	2	1256813
1061	14.5	4.6	0.6	chr14	103428036	103428202	(3615516)	C	MER41-int	LTR/ERV1	(0)	5946	5773	1256813
18	0.0	7.1	0.0	chr14	103428281	103428308	(3615410)	+	(TTGC)n	Simple_repeat	1	30	(0)	1256815
699	21.2	2.7	1.6	chr14	104078003	104078184	(2965534)	+	LTR41C	LTR/ERVL	2	185	(516)	1258068
336	24.4	10.3	7.1	chr14	104078215	104078439	(2965279)	+	LTR41C	LTR/ERVL	363	595	(106)	1258068
1094	11.3	10.6	0.0	chr14	104078454	104078621	(2965097)	C	AluJo	SINE/Alu	(12)	300	113	1258069
33	0.0	0.0	0.0	chr14	104581638	104581665	(2462053)	+	(AG)n	Simple_repeat	1	28	(0)	1258563
15	22.5	2.3	2.3	chr14	104581668	104581710	(2462008)	+	(TG)n	Simple_repeat	1	44	(0)	1258564
1100	19.7	4.0	0.5	chr14	104752292	104752509	(2291209)	+	AluJb	SINE/Alu	73	298	(14)	1258776
1673	15.7	7.9	3.0	chr14	106230947	106231133	(812585)	+	THE1D	LTR/ERVL-MaLR	1	209	(172)	1260460
68	0.0	0.0	0.0	chr14	106231134	106231191	(812527)	+	(TC)n	Simple_repeat	1	58	(0)	1260461
1673	15.7	7.9	3.0	chr14	106231192	106231365	(812353)	+	THE1D	LTR/ERVL-MaLR	210	381	(0)	1260460
6252	11.0	1.8	3.0	chr14	106539394	106540357	(503361)	+	LTR13_	LTR/ERVK	3	954	(0)	1260798
368	28.0	2.6	1.7	chr15	25998750	25998908	(75992281)	+	MIR	SINE/MIR	82	250	(18)	1270850
26	23.9	4.7	1.1	chr15	25999018	25999102	(75992087)	+	(CT)n	Simple_repeat	1	89	(0)	1270851
16	0.0	5.0	0.0	chr15	25999122	25999141	(75992048)	+	(CT)n	Simple_repeat	1	21	(0)	1270851
33	0.0	0.0	0.0	chr15	25999161	25999188	(75992001)	+	(TC)n	Simple_repeat	1	28	(0)	1270852
30	3.0	2.9	0.0	chr15	25999213	25999246	(75991943)	+	(CT)n	Simple_repeat	1	35	(0)	1270853
1930	11.7	5.8	6.0	chr15	27073904	27074268	(74916921)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1272225
579	28.7	14.2	7.1	chr15	27074269	27074465	(74916724)	C	MLT1E1	LTR/ERVL-MaLR	(243)	317	71	1272224
43	0.0	0.0	0.0	chr15	27248768	27248804	(74742385)	+	(AC)n	Simple_repeat	1	37	(0)	1272417
34	2.5	0.0	0.0	chr15	27248805	27248844	(74742345)	+	(GA)n	Simple_repeat	1	40	(0)	1272418
1128	24.1	24.2	5.3	chr15	27629521	27630016	(74361173)	+	MLT2F	LTR/ERVL	1	591	(72)	1272856
54	0.0	0.0	0.0	chr15	27630017	27630062	(74361127)	+	(CA)n	Simple_repeat	1	46	(0)	1272857
30	2.8	0.0	0.0	chr15	27630063	27630098	(74361091)	+	(GA)n	Simple_repeat	1	36	(0)	1272858
228	17.5	0.0	0.0	chr15	27630117	27630156	(74361033)	+	MLT2F	LTR/ERVL	515	554	(9)	1272859
301	21.4	4.9	5.8	chr15	27630241	27630344	(74360845)	C	MLT1I	LTR/ERVL-MaLR	(59)	352	250	1272860
24	3.5	0.0	0.0	chr15	28984849	28984877	(73006312)	+	(CT)n	Simple_repeat	1	29	(0)	1274831
33	3.1	0.0	0.0	chr15	28984913	28984945	(73006244)	+	(CT)n	Simple_repeat	1	33	(0)	1274831
3884	11.4	7.3	3.1	chr15	29672818	29673424	(72317765)	C	MER41B	LTR/ERV1	(0)	634	1	1275851
3665	14.8	4.4	7.5	chr15	29673425	29673894	(72317295)	C	LTR8	LTR/ERV1	(232)	459	6	1275850
1023	22.2	3.6	0.7	chr15	30325971	30326259	(71664930)	+	MSTB1	LTR/ERVL-MaLR	1	307	(158)	1276871
116	15.3	0.0	0.5	chr15	30326260	30326456	(71664733)	+	(CT)n	Simple_repeat	1	197	(0)	1276872
1207	16.3	3.5	0.5	chr15	30326457	30326678	(71664511)	+	MSTB1	LTR/ERVL-MaLR	204	432	(0)	1276871
51	0.0	0.0	0.0	chr15	31305339	31305382	(70685807)	+	(TG)n	Simple_repeat	1	44	(0)	1278435
32	2.4	4.7	0.0	chr15	31305383	31305425	(70685764)	+	(AG)n	Simple_repeat	1	45	(0)	1278436
9360	16.0	5.8	5.3	chr15	31450102	31450382	(70540807)	C	ERVL-B4-int	LTR/ERVL	(1678)	4036	3781	1278623
19	0.0	0.0	0.0	chr15	31450383	31450403	(70540786)	+	(GA)n	Simple_repeat	1	21	(0)	1278625
31	16.6	2.8	1.4	chr15	31450411	31450481	(70540708)	+	G-rich	Low_complexity	1	73	(0)	1278626
1505	19.9	4.8	1.2	chr15	31450497	31450841	(70540348)	C	MLT2D	LTR/ERVL	(36)	378	21	1278627
2088	13.6	12.2	2.3	chr15	33678188	33678572	(68312617)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1281653
41	0.0	0.0	0.0	chr15	34659909	34659943	(67331246)	+	(AG)n	Simple_repeat	1	35	(0)	1283179
3534	24.9	8.3	5.1	chr15	34813665	34813877	(67177312)	+	L1MEg	LINE/L1	159	378	(5864)	1283435
38	4.9	0.0	0.0	chr15	34813878	34813919	(67177270)	+	(GA)n	Simple_repeat	1	42	(0)	1283436
3534	24.9	8.3	5.1	chr15	34813920	34814751	(67176438)	+	L1MEg	LINE/L1	379	1244	(4998)	1283435
56	7.1	0.0	0.0	chr15	35016395	35016468	(66974721)	+	(GA)n	Simple_repeat	1	74	(0)	1283790
54	0.0	0.0	0.0	chr15	37098380	37098425	(64892764)	+	(GA)n	Simple_repeat	1	46	(0)	1286503
46	18.7	0.0	0.0	chr15	37100238	37100328	(64890861)	+	(TCTC)n	Simple_repeat	1	91	(0)	1286510
33	14.5	0.0	0.0	chr15	37100691	37100744	(64890445)	+	(GT)n	Simple_repeat	1	54	(0)	1286512
18	17.3	0.0	2.8	chr15	37100727	37100762	(64890427)	+	(GC)n	Simple_repeat	1	36	(0)	1286513
23	17.4	4.9	1.9	chr15	37100766	37100818	(64890371)	+	GA-rich	Low_complexity	1	54	(0)	1286514
12	8.9	4.2	0.0	chr15	37102047	37102070	(64889119)	+	(GGAG)n	Simple_repeat	1	25	(0)	1286517
15	0.0	5.3	0.0	chr15	37102095	37102113	(64889076)	+	(TG)n	Simple_repeat	1	20	(0)	1286518
24	3.5	0.0	0.0	chr15	37102113	37102141	(64889048)	+	(GA)n	Simple_repeat	1	29	(0)	1286519
66	3.0	1.4	0.0	chr15	37111300	37111368	(64879821)	+	(TC)n	Simple_repeat	1	70	(0)	1286532
30	0.0	2.8	0.0	chr15	37166347	37166382	(64824807)	+	(CA)n	Simple_repeat	1	37	(0)	1286607
57	0.0	0.0	0.0	chr15	37166383	37166431	(64824758)	+	(AG)n	Simple_repeat	1	49	(0)	1286608
1797	15.7	15.2	1.4	chr15	38017758	38018124	(63973065)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	1287605
252	28.0	10.8	14.0	chr15	38089985	38090512	(63900677)	C	MLT1O	LTR/ERVL-MaLR	(0)	542	34	1287733
694	30.7	8.2	7.3	chr15	38105528	38105691	(63885498)	+	LTR33	LTR/ERVL	1	185	(330)	1287754
42	0.0	0.0	0.0	chr15	38105692	38105727	(63885462)	+	(GA)n	Simple_repeat	1	36	(0)	1287755
694	30.7	8.2	7.3	chr15	38105728	38106068	(63885121)	+	LTR33	LTR/ERVL	186	510	(5)	1287754
15	0.0	0.0	0.0	chr15	38251507	38251523	(63739666)	+	(TC)n	Simple_repeat	1	17	(0)	1288010
38	2.8	0.0	0.0	chr15	38251524	38251560	(63739629)	+	(CA)n	Simple_repeat	1	37	(0)	1288011
54	0.0	0.0	0.0	chr15	38251698	38251743	(63739446)	+	(AC)n	Simple_repeat	1	46	(0)	1288012
19	19.7	8.5	0.0	chr15	38621003	38621061	(63370128)	+	(TC)n	Simple_repeat	1	64	(0)	1288605
2025	15.6	11.9	1.8	chr15	39235428	39235811	(62755378)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1289430
24	10.8	0.0	0.0	chr15	39744728	39744774	(62246415)	+	(GTCT)n	Simple_repeat	1	47	(0)	1290105
40	0.0	0.0	0.0	chr15	39744778	39744811	(62246378)	+	(CA)n	Simple_repeat	1	34	(0)	1290106
225	23.2	1.2	6.8	chr15	39744812	39744899	(62246290)	+	LTR81A	LTR/Gypsy	510	592	(561)	1290107
366	29.2	6.6	7.2	chr15	39744875	39745180	(62246009)	+	LTR81A	LTR/Gypsy	805	1108	(242)	1290107
1718	15.8	15.7	1.6	chr15	39872546	39872911	(62118278)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	1290301
49	0.0	0.0	0.0	chr15	40289928	40289969	(61701220)	+	(AG)n	Simple_repeat	1	42	(0)	1290972
27	3.0	0.0	0.0	chr15	40289970	40289998	(61701191)	+	(TG)n	Simple_repeat	2	30	(0)	1290973
2098	10.0	0.0	1.4	chr15	40558793	40559071	(61432118)	C	AluSx	SINE/Alu	(5)	307	33	1291421
18	21.0	0.0	0.0	chr15	40559072	40559106	(61432083)	+	(CT)n	Simple_repeat	1	35	(0)	1291422
1640	15.8	2.2	2.5	chr15	40559108	40559386	(61431803)	C	AluJr4	SINE/Alu	(33)	279	2	1291423
15	8.7	0.0	0.0	chr15	40754816	40754840	(61236349)	+	(GCGG)n	Simple_repeat	1	25	(0)	1291861
1841	16.9	0.0	2.8	chr15	41233938	41234256	(60756933)	C	AluJr	SINE/Alu	(2)	310	1	1292848
2002	15.5	0.0	0.3	chr15	41599595	41599885	(60391304)	C	AluJr4	SINE/Alu	(22)	290	1	1293710
81	0.0	0.0	0.0	chr15	41599887	41599955	(60391234)	+	(TC)n	Simple_repeat	1	69	(0)	1293711
21	0.0	0.0	0.0	chr15	41599956	41599978	(60391211)	+	(GT)n	Simple_repeat	1	23	(0)	1293712
18	7.5	3.6	0.0	chr15	41599978	41600005	(60391184)	+	(GA)n	Simple_repeat	1	29	(0)	1293713
2028	14.1	0.3	2.5	chr15	41600028	41600346	(60390843)	+	AluJb	SINE/Alu	1	312	(0)	1293714
222	34.0	6.0	2.7	chr15	41656116	41656227	(60334962)	C	L2b	LINE/L2	(167)	3208	3093	1293853
52	1.8	3.6	0.0	chr15	41656323	41656378	(60334811)	+	(TC)n	Simple_repeat	1	58	(0)	1293854
1394	17.6	5.6	0.8	chr15	41656380	41656507	(60334682)	C	AluJo	SINE/Alu	(50)	262	135	1293855
30	0.0	3.1	0.0	chr15	41656508	41656539	(60334650)	+	(TTTATT)n	Simple_repeat	1	33	(0)	1293856
1896	13.6	5.6	1.2	chr15	41937863	41938205	(60052984)	C	Tigger4b	DNA/TcMar-Tigger	(2)	359	1	1294273
1020	23.4	8.0	0.3	chr15	42063545	42063803	(59927386)	+	MLT1F2	LTR/ERVL-MaLR	205	496	(73)	1294497
33	12.7	3.3	0.0	chr15	42063956	42063997	(59927192)	+	GA-rich	Low_complexity	1	43	(0)	1294498
43	0.0	0.0	0.0	chr15	42063998	42064034	(59927155)	+	(GT)n	Simple_repeat	1	37	(0)	1294499
33	12.7	3.3	0.0	chr15	42064035	42064052	(59927137)	+	GA-rich	Low_complexity	44	62	(0)	1294500
2185	10.9	1.0	0.0	chr15	42064055	42064357	(59926832)	C	AluSq2	SINE/Alu	(7)	306	1	1294501
251	34.5	9.9	6.2	chr15	42493565	42494368	(59496821)	+	L2b	LINE/L2	1231	2067	(1352)	1295221
904	19.2	6.0	0.0	chr15	42622133	42622288	(59368901)	+	AluJo	SINE/Alu	137	302	(10)	1295493
36	5.2	0.0	0.0	chr15	42622339	42622378	(59368811)	+	(CT)n	Simple_repeat	1	40	(0)	1295494
935	19.9	1.3	0.0	chr15	42622379	42622529	(59368660)	C	AluJr	SINE/Alu	(23)	289	137	1295495
11	28.4	0.0	0.0	chr15	43518552	43518590	(58472599)	+	(GCTGGA)n	Simple_repeat	1	39	(0)	1297154
1318	15.4	1.7	0.9	chr15	44727256	44727484	(57263705)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	6	1299467
7071	8.4	3.5	2.2	chr15	44784189	44785182	(57206007)	C	LTR13	LTR/ERVK	(0)	1007	1	1299553
22131	13.2	5.4	6.5	chr15	44877922	44882678	(57108511)	C	HUERS-P1-int	LTR/ERV1	(898)	4117	1	1299694
1621	11.6	0.0	6.4	chr15	44889324	44889574	(57101615)	+	AluSz	SINE/Alu	1	235	(77)	1299704
42	7.2	1.7	0.0	chr15	44889576	44889634	(57101555)	+	(AG)n	Simple_repeat	1	60	(0)	1299705
1200	15.6	0.0	9.9	chr15	44921745	44921913	(57069276)	+	AluJr	SINE/Alu	132	282	(30)	1299761
15	0.0	0.0	0.0	chr15	44921914	44921930	(57069259)	+	(TC)n	Simple_repeat	1	17	(0)	1299763
37	0.0	0.0	0.0	chr15	44921931	44921962	(57069227)	+	(CA)n	Simple_repeat	1	32	(0)	1299764
13	9.3	0.0	0.0	chr15	44921963	44921985	(57069204)	+	(AAAT)n	Simple_repeat	1	23	(0)	1299765
18	17.6	2.7	7.8	chr15	45167093	45167167	(56824022)	+	(GCCGCGG)n	Simple_repeat	1	77	(0)	1300158
4768	8.9	0.6	0.0	chr15	45583636	45584264	(56406925)	C	MER41B	LTR/ERV1	(1)	633	1	1300981
1597	12.1	4.3	2.6	chr15	45584265	45584411	(56406778)	C	MER4D1	LTR/ERV1	(123)	777	624	1300980
697	19.6	0.0	2.1	chr15	45584389	45584546	(56406643)	+	FLAM_C	SINE/Alu	6	218	(84)	1300977
2429	11.9	0.3	0.0	chr15	48900226	48900536	(53090653)	+	AluSx1	SINE/Alu	1	312	(0)	1305505
747	23.7	2.3	2.8	chr15	48900716	48900893	(53090296)	C	MER5B	DNA/hAT-Charlie	(0)	178	2	1305506
2619	15.2	3.3	4.6	chr15	49191003	49191485	(52799704)	C	LTR54	LTR/ERV1	(29)	481	1	1305942
3156	21.4	7.0	1.9	chr15	49191503	49192279	(52798910)	C	L1MC4	LINE/L1	(514)	7596	6778	1305934
15	0.0	0.0	0.0	chr15	49258778	49258794	(52732395)	+	(AT)n	Simple_repeat	1	17	(0)	1306037
42	0.0	0.0	0.0	chr15	49258795	49258830	(52732359)	+	(TG)n	Simple_repeat	1	36	(0)	1306038
19	0.0	0.0	0.0	chr15	49258831	49258851	(52732338)	+	(AG)n	Simple_repeat	1	21	(0)	1306039
1457	2.6	2.0	0.0	chr15	49258852	49259091	(52732098)	C	L1P1	LINE/L1	(704)	5451	5208	1306040
30	0.0	0.0	0.0	chr15	49422121	49422146	(52569043)	+	(AG)n	Simple_repeat	1	26	(0)	1306211
18	31.6	0.0	0.0	chr15	49422147	49422193	(52568996)	+	(TG)n	Simple_repeat	1	47	(0)	1306212
1605	23.3	4.5	5.2	chr15	49438919	49439512	(52551677)	C	MLT1F1	LTR/ERVL-MaLR	(3)	566	3	1306233
46	0.0	0.0	0.0	chr15	50254739	50254777	(51736412)	+	(TC)n	Simple_repeat	1	39	(0)	1307353
20	10.8	0.0	0.0	chr15	50254778	50254807	(51736382)	+	(GT)n	Simple_repeat	1	30	(0)	1307354
630	26.3	2.3	2.3	chr15	50255993	50256167	(51735022)	+	MIRb	SINE/MIR	23	197	(71)	1307359
515	33.0	3.0	2.0	chr15	50256184	50256378	(51734811)	+	Tigger12c	DNA/TcMar-Tigger	3	199	(535)	1307360
1929	15.4	1.0	0.0	chr15	50256393	50256685	(51734504)	C	AluJb	SINE/Alu	(16)	296	1	1307361
308	24.9	5.3	3.0	chr15	50260631	50260754	(51730435)	C	MIR	SINE/MIR	(56)	212	82	1307370
2175	11.0	1.0	0.7	chr15	50734904	50735204	(51255985)	C	AluSp	SINE/Alu	(10)	303	2	1308399
662	23.8	4.5	0.6	chr15	50735205	50735374	(51255815)	C	L1ME1	LINE/L1	(265)	5908	5733	1308398
17	5.0	0.0	0.0	chr15	50735379	50735399	(51255790)	+	(CT)n	Simple_repeat	1	21	(0)	1308400
336	23.5	6.6	0.0	chr15	50735400	50735484	(51255705)	C	L1MC4a	LINE/L1	(2020)	5862	5772	1308396
43	13.6	0.0	0.0	chr15	50735501	50735567	(51255622)	+	(AC)n	Simple_repeat	1	67	(0)	1308401
32	5.2	0.0	0.0	chr15	51223554	51223593	(50767596)	+	(CT)n	Simple_repeat	1	40	(0)	1309251
50	0.0	0.0	0.0	chr15	51223594	51223636	(50767553)	+	(CA)n	Simple_repeat	1	43	(0)	1309252
2234	21.9	10.4	4.7	chr15	51468158	51469401	(50521788)	+	L1MC5	LINE/L1	7971	9290	(14)	1309575
740	23.1	0.7	0.7	chr15	51801058	51801200	(50189989)	+	AluJo	SINE/Alu	137	279	(33)	1310106
24	3.6	0.0	0.0	chr15	51801209	51801237	(50189952)	+	(TC)n	Simple_repeat	1	29	(0)	1310107
55	0.0	0.0	0.0	chr15	51801238	51801284	(50189905)	+	(CA)n	Simple_repeat	1	47	(0)	1310108
31	0.0	0.0	0.0	chr15	51801289	51801315	(50189874)	+	(TC)n	Simple_repeat	1	27	(0)	1310109
263	24.6	0.0	1.6	chr15	51801441	51801502	(50189687)	+	MIR3	SINE/MIR	119	179	(29)	1310110
553	25.2	16.1	3.0	chr15	52381380	52381718	(49609471)	+	L1ME4a	LINE/L1	5494	5885	(239)	1311189
17	0.0	0.0	0.0	chr15	52381764	52381782	(49609407)	+	(TC)n	Simple_repeat	1	19	(0)	1311190
31	0.0	0.0	0.0	chr15	52381783	52381809	(49609380)	+	(CA)n	Simple_repeat	1	27	(0)	1311191
274	20.3	4.1	9.2	chr15	52381858	52381893	(49609296)	+	L1ME4a	LINE/L1	5998	6027	(97)	1311189
2356	10.8	0.3	0.0	chr15	52381894	52382200	(49608989)	C	AluSq2	SINE/Alu	(4)	309	2	1311192
21619	12.9	5.7	2.0	chr15	55882108	55883678	(46107511)	+	L1MA3	LINE/L1	16	1751	(5814)	1316368
52	2.1	0.0	0.0	chr15	55883679	55883727	(46107462)	+	(AC)n	Simple_repeat	1	49	(0)	1316369
21619	12.9	5.7	2.0	chr15	55883728	55883879	(46107310)	+	L1MA3	LINE/L1	1752	1858	(5707)	1316368
2372	11.3	0.0	0.0	chr15	55883880	55884179	(46107010)	C	AluSx1	SINE/Alu	(12)	300	1	1316370
831	19.9	0.7	0.0	chr15	56039306	56039441	(45951748)	+	AluJo	SINE/Alu	120	256	(56)	1316615
44	0.0	0.0	0.0	chr15	56039477	56039514	(45951675)	+	(GT)n	Simple_repeat	1	38	(0)	1316616
1064	19.2	0.0	1.1	chr15	56320270	56320475	(45670714)	C	MLT1A	LTR/ERVL-MaLR	(0)	390	188	1316979
27	18.6	1.4	5.3	chr15	56320478	56320551	(45670638)	+	GA-rich	Low_complexity	1	75	(0)	1316980
277	17.1	2.8	4.1	chr15	56320570	56320642	(45670547)	C	MLT1A	LTR/ERVL-MaLR	(222)	168	97	1316979
484	27.5	9.4	4.7	chr15	56759328	56759836	(45231353)	+	LTR33A	LTR/ERVL	3	531	(0)	1317557
294	31.6	15.8	0.0	chr15	56885065	56885219	(45105970)	+	MLT1L	LTR/ERVL-MaLR	91	274	(336)	1317806
30	20.4	0.0	0.0	chr15	56885233	56885296	(45105893)	+	GA-rich	Low_complexity	1	64	(0)	1317807
576	31.1	3.6	2.8	chr15	56885364	56885581	(45105608)	+	MLT1L	LTR/ERVL-MaLR	367	586	(24)	1317806
16	8.5	4.0	0.0	chr15	57383209	57383233	(44607956)	+	(GA)n	Simple_repeat	1	26	(0)	1318614
2311	11.0	0.0	1.0	chr15	57383285	57383594	(44607595)	C	AluSc8	SINE/Alu	(1)	310	4	1318615
28	22.8	1.3	2.6	chr15	57996299	57996373	(43994816)	+	(CT)n	Simple_repeat	1	76	(0)	1319490
589	27.4	16.1	1.8	chr15	57996376	57997076	(43994113)	C	L1ME4b	LINE/L1	(129)	763	1	1319491
304	34.4	4.9	1.9	chr15	58161720	58161932	(43829257)	C	MIRc	SINE/MIR	(0)	268	53	1319697
33	0.0	0.0	0.0	chr15	58179510	58179537	(43811652)	+	(TG)n	Simple_repeat	1	28	(0)	1319731
19	8.1	0.0	0.0	chr15	58179540	58179565	(43811624)	+	(AG)n	Simple_repeat	1	26	(0)	1319732
26	11.2	0.0	0.0	chr15	58277407	58277445	(43713744)	+	(GT)n	Simple_repeat	1	39	(0)	1319890
17	9.1	0.0	0.0	chr15	58277445	58277468	(43713721)	+	(GA)n	Simple_repeat	1	24	(0)	1319891
17	4.9	0.0	0.0	chr15	58279836	58279856	(43711333)	+	(AG)n	Simple_repeat	1	21	(0)	1319895
230	29.8	6.7	1.2	chr15	58279994	58280078	(43711111)	+	L1ME3A	LINE/L1	593	682	(6421)	1319893
30	3.5	0.0	0.0	chr15	58307615	58307644	(43683545)	+	(AG)n	Simple_repeat	1	30	(0)	1319945
502	28.1	11.2	1.9	chr15	58307698	58307955	(43683234)	+	LTR90A	LTR	686	970	(6)	1319946
3474	13.1	4.0	1.1	chr15	58352020	58352550	(43638639)	C	MER41B	LTR/ERV1	(87)	547	1	1320027
1668	8.0	1.4	0.0	chr15	58352551	58352763	(43638426)	C	MER41-int	LTR/ERV1	(2)	5944	5729	1320027
16	9.1	5.6	0.0	chr15	58369611	58369639	(43621550)	+	(CTTTCT)n	Simple_repeat	1	31	(0)	1320044
29	10.3	0.0	0.0	chr15	58369640	58369682	(43621507)	+	(TG)n	Simple_repeat	1	43	(0)	1320045
15	27.3	0.0	0.0	chr15	58521845	58521888	(43469301)	+	(GAT)n	Simple_repeat	1	44	(0)	1320328
29	0.0	0.0	0.0	chr15	58521906	58521930	(43469259)	+	(TC)n	Simple_repeat	1	25	(0)	1320329
17	4.9	0.0	0.0	chr15	58591142	58591162	(43400027)	+	(AG)n	Simple_repeat	1	21	(0)	1320465
507	28.6	2.7	7.5	chr15	58591164	58591431	(43399758)	+	Charlie13b	DNA/hAT-Charlie	121	375	(137)	1320466
6880	9.3	2.4	1.1	chr15	58833342	58834296	(43156893)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	1320919
632	30.1	0.0	1.7	chr15	58834426	58834601	(43156588)	+	MER5B	DNA/hAT-Charlie	1	173	(5)	1320920
12	22.6	4.3	5.6	chr15	58933159	58933227	(43057962)	+	(GCGGTGGC)n	Simple_repeat	1	72	(0)	1321105
4547	11.2	0.1	2.2	chr15	60021358	60022004	(41969185)	C	MER41B	LTR/ERV1	(0)	634	1	1323122
1705	20.8	9.6	5.4	chr15	60022019	60022661	(41968528)	C	MER21C	LTR/ERVL	(137)	794	15	1323123
239	18.0	9.1	0.0	chr15	60032126	60032175	(41959014)	C	MLT2B1	LTR/ERVL	(0)	556	502	1323140
19	4.3	0.0	0.0	chr15	60032208	60032231	(41958958)	+	(TG)n	Simple_repeat	1	24	(0)	1323141
1958	18.2	10.1	6.1	chr15	60032251	60032694	(41958495)	C	MLT2B1	LTR/ERVL	(56)	464	1	1323140
19	0.0	0.0	0.0	chr15	60086094	60086114	(41905075)	+	(TC)n	Simple_repeat	1	21	(0)	1323225
33	3.1	0.0	0.0	chr15	60086115	60086147	(41905042)	+	(CA)n	Simple_repeat	1	33	(0)	1323226
23385	8.2	2.8	0.2	chr15	60331601	60335816	(41655373)	+	L1PA3	LINE/L1	1840	6154	(1)	1323622
398	11.7	0.0	1.6	chr15	60335828	60335888	(41655301)	+	L1MC3	LINE/L1	6797	6856	(929)	1323624
30	6.0	0.0	0.0	chr15	60335890	60335924	(41655265)	+	(TC)n	Simple_repeat	1	35	(0)	1323625
4366	18.4	4.7	4.2	chr15	60335926	60335970	(41655219)	+	L1MC3	LINE/L1	6814	6856	(929)	1323624
44	2.4	0.0	0.0	chr15	60335971	60336012	(41655177)	+	(TC)n	Simple_repeat	1	42	(0)	1323626
4366	18.4	4.7	4.2	chr15	60336013	60336927	(41654262)	+	L1MC3	LINE/L1	6857	7779	(6)	1323624
412	25.0	9.3	5.5	chr15	61937352	61937467	(40053722)	+	MIRb	SINE/MIR	2	126	(142)	1326111
616	29.6	1.7	3.4	chr15	62088378	62088615	(39902574)	+	MIR	SINE/MIR	29	262	(0)	1326326
49	0.0	0.0	0.0	chr15	62088757	62088798	(39902391)	+	(TC)n	Simple_repeat	1	42	(0)	1326327
34	0.0	0.0	0.0	chr15	62504819	62504847	(39486342)	+	(GT)n	Simple_repeat	1	29	(0)	1327011
24	3.6	0.0	0.0	chr15	62504848	62504876	(39486313)	+	(AG)n	Simple_repeat	1	29	(0)	1327012
2419	8.8	0.0	0.3	chr15	62504950	62505256	(39485933)	C	AluSx3	SINE/Alu	(5)	306	1	1327013
20	0.0	0.0	0.0	chr15	62841967	62841988	(39149201)	+	(CT)n	Simple_repeat	1	22	(0)	1327482
17	22.7	1.9	1.8	chr15	63121977	63122030	(38869159)	+	G-rich	Low_complexity	1	55	(0)	1327998
937	20.7	0.6	0.0	chr15	63392231	63392394	(38598795)	C	AluJo	SINE/Alu	(11)	301	137	1328458
1662	17.5	3.5	0.0	chr15	63547448	63547721	(38443468)	+	AluJo	SINE/Alu	1	284	(28)	1328774
122	11.7	0.0	0.0	chr15	63547723	63547908	(38443281)	+	(AGAG)n	Simple_repeat	1	186	(0)	1328775
336	7.5	0.0	0.0	chr15	63547916	63547955	(38443234)	+	AluYh3	SINE/Alu	12	51	(260)	1328776
1096	15.1	1.1	3.8	chr15	63547962	63548147	(38443042)	+	AluSx3	SINE/Alu	131	311	(0)	1328777
32	3.2	0.0	0.0	chr15	63862707	63862738	(38128451)	+	(TC)n	Simple_repeat	1	32	(0)	1329277
1074	31.7	6.9	4.5	chr15	64229222	64229506	(37761683)	+	MLT1K	LTR/ERVL-MaLR	1	296	(299)	1329977
43	4.5	0.0	0.0	chr15	64229507	64229552	(37761637)	+	(TC)n	Simple_repeat	1	46	(0)	1329978
1074	31.7	6.9	4.5	chr15	64229553	64229844	(37761345)	+	MLT1K	LTR/ERVL-MaLR	297	592	(3)	1329977
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
2073	4.4	0.7	12.4	chr15	65296541	65296879	(36694310)	+	AluY	SINE/Alu	4	302	(9)	1332325
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
706	12.5	0.0	1.8	chr15	65305005	65305116	(36686073)	+	AluSz	SINE/Alu	1	110	(202)	1332346
1979	17.5	0.0	0.7	chr15	65804292	65804588	(36186601)	+	AluJr	SINE/Alu	1	295	(17)	1333371
20	9.4	2.8	2.7	chr15	65804616	65804651	(36186538)	+	(TC)n	Simple_repeat	1	37	(0)	1333372
394	32.9	9.9	4.4	chr15	65837489	65837943	(36153246)	+	L2	LINE/L2	1633	2115	(1304)	1333448
4046	27.1	8.8	5.8	chr15	65971074	65972426	(36018763)	+	HAL1	LINE/L1	11	1464	(1043)	1333721
253	28.3	6.6	8.3	chr15	66141042	66141149	(35850040)	C	MIRb	SINE/MIR	(42)	226	121	1334049
67	0.0	0.0	0.0	chr15	66141234	66141290	(35849899)	+	(GT)n	Simple_repeat	1	57	(0)	1334050
18	11.6	0.0	0.0	chr15	66141291	66141318	(35849871)	+	(AG)n	Simple_repeat	1	28	(0)	1334051
259	26.2	7.2	1.0	chr15	66141443	66141510	(35849679)	+	MIR3	SINE/MIR	78	149	(59)	1334052
240	27.8	0.0	1.4	chr15	66150677	66150749	(35840440)	C	MIR3	SINE/MIR	(6)	202	131	1334068
366	20.6	0.0	1.4	chr15	66150751	66150823	(35840366)	+	AluJr4	SINE/Alu	209	280	(32)	1334069
55	0.0	0.0	0.0	chr15	66150824	66150870	(35840319)	+	(GA)n	Simple_repeat	1	47	(0)	1334070
12	26.1	0.0	4.1	chr15	66150982	66151030	(35840159)	+	G-rich	Low_complexity	1	49	(0)	1334071
1765	10.2	0.0	0.0	chr15	66623635	66623860	(35367329)	+	AluSx3	SINE/Alu	82	307	(4)	1335107
4640	12.0	0.0	0.3	chr15	66624022	66624655	(35366534)	+	MER41B	LTR/ERV1	3	634	(0)	1335108
17	20.9	0.0	5.5	chr15	66702311	66702366	(35288823)	+	(GAGC)n	Simple_repeat	1	52	(0)	1335298
278	33.5	4.4	3.9	chr15	67025640	67025819	(34965370)	C	L2c	LINE/L2	(219)	3168	2988	1335910
335	32.5	3.5	0.6	chr15	67025989	67026152	(34965037)	+	L4_C_Mam	LINE/RTE-X	4657	4825	(313)	1335913
221	24.3	4.2	19.1	chr15	67068058	67068225	(34922964)	C	MIRc	SINE/MIR	(27)	241	100	1336017
252	21.2	7.2	2.6	chr15	67098178	67098266	(34892923)	+	MIR3	SINE/MIR	75	156	(52)	1336071
30	0.0	0.0	0.0	chr15	67098323	67098350	(34892839)	+	(GGAG)n	Simple_repeat	1	28	(0)	1336072
19	10.1	0.0	0.0	chr15	67098353	67098384	(34892805)	+	(AGCA)n	Simple_repeat	1	32	(0)	1336073
312	23.7	7.1	1.5	chr15	67268778	67268910	(34722279)	+	L1ME2z	LINE/L1	6290	6430	(14)	1336345
1941	13.6	11.6	3.9	chr15	67851261	67851613	(34139576)	+	MSTA	LTR/ERVL-MaLR	1	391	(37)	1337228
2261	11.4	0.0	0.3	chr15	67851614	67851910	(34139279)	C	AluSx1	SINE/Alu	(16)	296	1	1337229
510	21.2	9.0	3.6	chr15	67989702	67989815	(34001374)	C	MER106B	DNA/hAT-Charlie	(0)	1059	934	1337533
49	0.0	0.0	0.0	chr15	67989816	67989857	(34001332)	+	(CT)n	Simple_repeat	1	42	(0)	1337534
510	21.2	9.0	3.6	chr15	67989858	67989879	(34001310)	C	MER106B	DNA/hAT-Charlie	(126)	933	915	1337533
2488	19.1	0.8	2.8	chr15	67989881	67990385	(34000804)	C	MER106B	DNA/hAT-Charlie	(535)	524	30	1337533
2333	8.7	0.0	1.3	chr15	68305905	68306203	(33684986)	+	AluY	SINE/Alu	1	295	(16)	1338103
15	0.0	0.0	0.0	chr15	68306310	68306326	(33684863)	+	(TC)n	Simple_repeat	1	17	(0)	1338104
829	21.1	11.4	2.5	chr15	68342702	68342900	(33648289)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1338163
441	25.4	20.2	1.9	chr15	68342901	68342997	(33648192)	+	MIRb	SINE/MIR	11	121	(147)	1338164
50	0.0	0.0	0.0	chr15	68342998	68343040	(33648149)	+	(TC)n	Simple_repeat	1	43	(0)	1338165
441	25.4	20.2	1.9	chr15	68343041	68343147	(33648042)	+	MIRb	SINE/MIR	122	262	(6)	1338164
2060	9.7	1.1	3.5	chr15	69128186	69128474	(32862715)	+	AluSx1	SINE/Alu	1	282	(30)	1339682
51	0.0	0.0	0.0	chr15	69128475	69128520	(32862669)	+	(AATA)n	Simple_repeat	1	46	(0)	1339683
1179	12.6	8.5	11.4	chr15	69128521	69128656	(32862533)	+	AluJr	SINE/Alu	128	282	(30)	1339681
19	11.6	0.0	0.0	chr15	69128657	69128685	(32862504)	+	(TC)n	Simple_repeat	1	29	(0)	1339684
2793	25.5	5.7	13.0	chr15	69181895	69182269	(32808920)	C	L2a	LINE/L2	(1746)	1673	1297	1339780
35	0.0	0.0	0.0	chr15	69182270	69182299	(32808890)	+	(TG)n	Simple_repeat	1	30	(0)	1339783
2793	25.5	5.7	13.0	chr15	69182300	69182731	(32808458)	C	L2a	LINE/L2	(2123)	1296	955	1339780
1990	16.3	0.0	4.6	chr15	69608927	69609251	(32381938)	C	AluJb	SINE/Alu	(1)	311	2	1340577
37	0.0	0.0	2.8	chr15	69609318	69609353	(32381836)	+	(GA)n	Simple_repeat	1	36	(0)	1340578
312	24.6	10.0	3.8	chr15	69609373	69609503	(32381686)	+	LTR88b	LTR/Gypsy?	293	432	(405)	1340576
47	2.1	2.1	0.0	chr15	70016136	70016183	(31975006)	+	(TC)n	Simple_repeat	1	49	(0)	1341333
30	27.6	0.0	0.0	chr15	70016199	70016276	(31974913)	+	(TC)n	Simple_repeat	1	78	(0)	1341333
390	25.7	3.5	3.5	chr15	70161886	70162026	(31829163)	C	MIRb	SINE/MIR	(92)	176	36	1341592
49	20.9	0.0	0.0	chr15	70162065	70162163	(31829026)	+	GA-rich	Low_complexity	1	99	(0)	1341593
39	5.4	5.2	0.0	chr15	70162147	70162204	(31828985)	+	(GT)n	Simple_repeat	1	61	(0)	1341594
43	31.7	3.2	0.0	chr15	70162164	70162249	(31828940)	+	(TGAGAG)n	Simple_repeat	2	192	(0)	1341595
385	30.0	10.7	8.3	chr15	70398074	70398545	(31592644)	C	MLT1O	LTR/ERVL-MaLR	(0)	542	58	1342073
36	0.0	0.0	0.0	chr15	70398549	70398579	(31592610)	+	(GT)n	Simple_repeat	1	31	(0)	1342074
21	4.0	0.0	0.0	chr15	70398580	70398605	(31592584)	+	(AG)n	Simple_repeat	1	26	(0)	1342075
2493	16.5	3.0	0.7	chr15	70424889	70425304	(31565885)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1342122
830	27.7	5.8	1.5	chr15	71735113	71735305	(30255884)	C	MamGypLTR1a	LTR/Gypsy	(146)	638	430	1344261
911	8.8	0.0	5.1	chr15	72237723	72237878	(29753311)	+	L1MA3	LINE/L1	6158	6305	(0)	1345118
19	0.0	0.0	0.0	chr15	72821101	72821121	(29170068)	+	(CA)n	Simple_repeat	1	21	(0)	1346152
58	1.9	0.0	0.0	chr15	72821135	72821188	(29170001)	+	(GA)n	Simple_repeat	1	54	(0)	1346153
265	21.0	3.2	0.0	chr15	73760499	73760572	(28230617)	+	MIR	SINE/MIR	80	157	(51)	1347675
1084	32.7	12.1	3.0	chr15	73760724	73761414	(28229775)	+	L2c	LINE/L2	1718	2490	(929)	1347676
1628	26.3	9.9	8.5	chr15	74153179	74153413	(27837776)	C	Arthur1B	DNA/hAT-Tip100	(0)	1225	944	1348347
2471	18.9	13.1	3.9	chr15	74153414	74153469	(27837720)	C	MLT2F	LTR/ERVL	(0)	663	615	1348348
43	2.5	0.0	0.0	chr15	74153470	74153510	(27837679)	+	(TC)n	Simple_repeat	1	41	(0)	1348349
2471	18.9	13.1	3.9	chr15	74153511	74153955	(27837234)	C	MLT2F	LTR/ERVL	(49)	614	93	1348348
17	15.6	0.0	0.0	chr15	74210036	74210064	(27781125)	+	GA-rich	Low_complexity	1	29	(0)	1348445
671	29.1	13.2	3.4	chr15	74210189	74210569	(27780620)	+	L1ME3G	LINE/L1	376	799	(125)	1348446
1788	18.9	0.0	0.3	chr15	74398245	74398529	(27592660)	+	AluJb	SINE/Alu	1	284	(28)	1348766
18	0.0	0.0	0.0	chr15	74398532	74398551	(27592638)	+	(TC)n	Simple_repeat	1	20	(0)	1348767
38	0.0	0.0	0.0	chr15	74398552	74398584	(27592605)	+	(TG)n	Simple_repeat	1	33	(0)	1348768
2319	22.7	3.5	7.4	chr15	74398594	74399065	(27592124)	+	L1MB7	LINE/L1	5478	5932	(252)	1348769
2167	12.0	2.6	0.3	chr15	74887122	74887422	(27103767)	+	AluSx	SINE/Alu	1	308	(4)	1349705
2119	9.3	7.3	6.1	chr15	74887423	74887716	(27103473)	C	THE1D	LTR/ERVL-MaLR	(63)	318	1	1349703
6044	4.2	1.5	1.8	chr15	74887803	74888597	(27102592)	C	SVA_D	Retroposon/SVA	(2)	1384	592	1349706
261	33.3	9.4	0.7	chr15	74907212	74907356	(27083833)	C	MIRb	SINE/MIR	(88)	180	22	1349733
296	19.3	5.9	3.4	chr15	74907358	74907457	(27083732)	+	MIR1_Amn	SINE/MIR	72	180	(50)	1349734
1025	15.7	7.8	7.1	chr15	75239728	75239980	(26751209)	+	MER57E1	LTR/ERV1	113	367	(5)	1350430
78	15.8	0.0	0.0	chr15	75239981	75240113	(26751076)	+	(CTCT)n	Simple_repeat	1	133	(0)	1350432
29	0.0	0.0	0.0	chr15	75731882	75731906	(26259283)	+	(CT)n	Simple_repeat	1	25	(0)	1351422
320	18.4	4.8	6.2	chr15	77468389	77468529	(24522660)	C	L1MC4	LINE/L1	(2)	8040	7777	1354105
22	3.9	0.0	0.0	chr15	77468569	77468595	(24522594)	+	(TC)n	Simple_repeat	1	27	(0)	1354106
34	0.0	0.0	0.0	chr15	77468598	77468626	(24522563)	+	(CA)n	Simple_repeat	1	29	(0)	1354107
1374	27.4	10.0	4.1	chr15	77468656	77469390	(24521799)	C	L1MC4	LINE/L1	(139)	7903	7121	1354105
33	0.0	0.0	0.0	chr15	77497656	77497683	(24493506)	+	(AG)n	Simple_repeat	1	28	(0)	1354143
24	0.0	0.0	0.0	chr15	77497684	77497710	(24493479)	+	(TG)n	Simple_repeat	1	27	(0)	1354144
346	22.5	2.7	0.0	chr15	77737296	77737366	(24253823)	C	MIRc	SINE/MIR	(112)	156	84	1354567
38	20.4	1.1	3.1	chr15	77737402	77737496	(24253693)	+	G-rich	Low_complexity	1	96	(0)	1354568
346	25.7	10.8	4.5	chr15	77737501	77737810	(24253379)	+	L2a	LINE/L2	631	962	(1134)	1354569
2501	14.4	5.4	0.0	chr15	77803521	77803923	(24187266)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1354700
451	32.2	5.6	0.0	chr15	78150174	78150325	(23840864)	C	MIR3	SINE/MIR	(18)	190	30	1355316
522	19.6	4.1	8.4	chr15	80054202	80054379	(21936810)	+	MLT1H2	LTR/ERVL-MaLR	316	485	(4)	1358886
1095	14.8	4.1	6.2	chr15	80054440	80054482	(21936707)	C	MER20	DNA/hAT-Charlie	(0)	219	180	1358887
2397	4.7	2.0	1.7	chr15	80054483	80054650	(21936539)	C	AluYm1	SINE/Alu	(11)	300	133	1358888
27	0.0	0.0	0.0	chr15	80054651	80054676	(21936513)	+	(T)n	Simple_repeat	1	26	(0)	1358889
15	4.0	3.6	3.5	chr15	80148733	80148760	(21842429)	+	(AAC)n	Simple_repeat	1	29	(0)	1359064
48	0.0	0.0	0.0	chr15	80148847	80148887	(21842302)	+	(GT)n	Simple_repeat	1	41	(0)	1359065
33	11.0	0.0	0.0	chr15	80148890	80148938	(21842251)	+	(AG)n	Simple_repeat	1	49	(0)	1359066
285	31.5	14.3	1.8	chr15	80849294	80849513	(21141676)	+	L2	LINE/L2	2346	2597	(822)	1360218
185	24.2	8.3	9.2	chr15	80849518	80849626	(21141563)	+	MIR3	SINE/MIR	50	157	(51)	1360219
18	0.0	0.0	0.0	chr15	80849670	80849689	(21141500)	+	(AG)n	Simple_repeat	1	20	(0)	1360220
25	4.9	4.4	2.1	chr15	81231166	81231210	(20759979)	+	(ATAAC)n	Simple_repeat	1	47	(0)	1360948
30	15.9	0.0	0.0	chr15	81231250	81231305	(20759884)	+	GA-rich	Low_complexity	1	56	(0)	1360949
71	1.6	0.0	0.0	chr15	81231325	81231389	(20759800)	+	(TC)n	Simple_repeat	1	65	(0)	1360950
1918	18.0	0.3	0.3	chr15	81231390	81231672	(20759517)	C	AluJb	SINE/Alu	(29)	283	1	1360951
2492	5.7	0.0	1.7	chr15	81564966	81565251	(20425938)	C	AluY	SINE/Alu	(30)	281	1	1361478
2245	28.7	13.2	2.1	chr15	81565252	81565291	(20425898)	+	L2a	LINE/L2	2917	2949	(470)	1361477
106	6.1	1.4	1.4	chr15	81565292	81565433	(20425756)	+	(TC)n	Simple_repeat	1	144	(0)	1361480
2245	27.1	17.8	0.6	chr15	81565434	81565780	(20425409)	+	L2a	LINE/L2	2950	3374	(52)	1361477
1831	21.4	2.9	5.2	chr15	81829919	81830292	(20160897)	+	MLT2D	LTR/ERVL	1	357	(57)	1361871
31	2.7	5.3	0.0	chr15	81830293	81830330	(20160859)	+	(TC)n	Simple_repeat	1	40	(0)	1361872
1831	21.4	2.9	5.2	chr15	81830331	81830343	(20160846)	+	MLT2D	LTR/ERVL	358	371	(43)	1361871
31	0.0	0.0	0.0	chr15	81830344	81830370	(20160819)	+	(AC)n	Simple_repeat	1	27	(0)	1361873
1831	21.4	2.9	5.2	chr15	81830371	81830405	(20160784)	+	MLT2D	LTR/ERVL	372	412	(2)	1361871
513	34.5	6.9	2.9	chr15	81830406	81831238	(20159951)	C	L1M6	LINE/L1	(1188)	5212	4340	1361870
101	5.2	4.9	0.0	chr15	81878199	81878340	(20112849)	+	(CT)n	Simple_repeat	1	149	(0)	1361954
18	7.8	0.0	0.0	chr15	81912046	81912069	(20079120)	+	(CT)n	Simple_repeat	1	24	(0)	1362014
47	2.3	0.0	0.0	chr15	81912070	81912114	(20079075)	+	(CA)n	Simple_repeat	1	45	(0)	1362015
22	17.7	1.9	1.9	chr15	82046055	82046107	(19945082)	+	(CCCT)n	Simple_repeat	1	54	(0)	1362235
19	23.5	1.4	4.2	chr15	82046309	82046378	(19944811)	+	(CCGCCCC)n	Simple_repeat	1	71	(0)	1362236
17	4.9	0.0	0.0	chr15	82046770	82046790	(19944399)	+	(CG)n	Simple_repeat	1	21	(0)	1362237
1739	23.7	7.6	6.3	chr15	82639655	82640132	(19351057)	+	MER68	LTR/ERVL	67	551	(12)	1363200
12	14.1	0.0	8.1	chr15	82647385	82647421	(19343768)	+	(CCCG)n	Simple_repeat	1	37	(0)	1363212
22	18.5	4.1	0.0	chr15	82675128	82675176	(19316013)	+	(CT)n	Simple_repeat	1	51	(0)	1363254
2151	11.9	0.0	0.0	chr15	82860655	82860939	(19130250)	+	AluSx1	SINE/Alu	1	285	(27)	1363580
37	13.3	1.2	3.6	chr15	82860943	82860956	(19130233)	+	A-rich	Low_complexity	1	13	(0)	1363581
30	0.0	0.0	0.0	chr15	82860957	82860982	(19130207)	+	(GA)n	Simple_repeat	1	26	(0)	1363582
37	13.3	1.2	3.6	chr15	82860983	82861049	(19130140)	+	A-rich	Low_complexity	14	79	(0)	1363583
470	28.4	9.6	2.8	chr15	82861080	82861427	(19129762)	+	L1ME3G	LINE/L1	240	561	(363)	1363584
27	33.5	0.0	0.0	chr15	82971369	82971458	(19019731)	+	GA-rich	Low_complexity	1	90	(0)	1363781
18	0.0	0.0	0.0	chr15	85009091	85009110	(16982079)	+	(GA)n	Simple_repeat	1	20	(0)	1367109
41	0.0	0.0	0.0	chr15	85009111	85009145	(16982044)	+	(GT)n	Simple_repeat	1	35	(0)	1367110
918	20.4	10.6	3.5	chr15	88487847	88488248	(13502941)	C	MSTD	LTR/ERVL-MaLR	(0)	465	1	1372485
25	6.1	0.0	0.0	chr15	88565499	88565523	(13425666)	+	(TC)n	Simple_repeat	1	25	(0)	1372588
56	0.0	0.0	0.0	chr15	88565524	88565571	(13425618)	+	(CA)n	Simple_repeat	1	48	(0)	1372589
185	29.4	3.8	0.0	chr15	88565630	88565680	(13425509)	+	MIRb	SINE/MIR	26	78	(190)	1372590
283	23.2	6.6	3.9	chr15	88565697	88565799	(13425390)	+	MER91A	DNA/hAT-Tip100	52	157	(39)	1372591
762	16.8	0.0	0.0	chr15	89002203	89002321	(12988868)	C	FLAM_A	SINE/Alu	(23)	119	1	1373431
64	0.0	1.7	0.0	chr15	89205129	89205186	(12786003)	+	(TC)n	Simple_repeat	1	59	(0)	1373819
1510	16.7	5.0	5.7	chr15	89205187	89205468	(12785721)	C	AluJr	SINE/Alu	(32)	280	1	1373820
59	1.9	0.0	0.0	chr15	89412826	89412880	(12578309)	+	(AG)n	Simple_repeat	1	55	(0)	1374155
86	28.4	3.6	2.4	chr15	89450710	89450779	(12540410)	+	GA-rich	Low_complexity	1	69	(0)	1374232
47	4.2	0.0	0.0	chr15	89450780	89450828	(12540361)	+	(AG)n	Simple_repeat	1	49	(0)	1374233
86	28.4	3.6	2.4	chr15	89450829	89451122	(12540067)	+	GA-rich	Low_complexity	70	368	(0)	1374234
57	1.9	0.0	0.0	chr15	89486548	89486600	(12504589)	+	(GA)n	Simple_repeat	1	53	(0)	1374299
41	4.0	0.0	0.0	chr15	89486601	89486649	(12504540)	+	(GT)n	Simple_repeat	1	49	(0)	1374300
193	24.8	11.4	6.4	chr15	89782104	89782228	(12208961)	+	MIR3	SINE/MIR	7	138	(70)	1374871
4195	11.7	4.3	1.0	chr15	89782290	89782735	(12208454)	+	MER41B	LTR/ERV1	2	449	(185)	1374872
30	17.3	4.6	0.0	chr15	90001395	90001459	(11989730)	+	GA-rich	Low_complexity	1	68	(0)	1375387
19	20.4	3.5	1.7	chr15	90001459	90001516	(11989673)	+	(GCGG)n	Simple_repeat	1	60	(0)	1375388
27	16.9	1.2	7.1	chr15	90001460	90001478	(11989711)	+	G-rich	Low_complexity	1	85	(0)	1375389
34	25.9	3.0	2.9	chr15	90001826	90001957	(11989232)	+	GA-rich	Low_complexity	1	136	(0)	1375392
36	0.0	0.0	0.0	chr15	90001967	90001997	(11989192)	+	(GA)n	Simple_repeat	1	31	(0)	1375393
23	21.8	0.0	0.0	chr15	90002020	90002072	(11989117)	+	(GCG)n	Simple_repeat	1	53	(0)	1375394
33	20.1	5.2	2.0	chr15	90062142	90062237	(11928952)	+	(TC)n	Simple_repeat	1	101	(0)	1375522
27	24.7	4.9	3.1	chr15	90062238	90062263	(11928926)	+	(TCCCTC)n	Simple_repeat	1	128	(0)	1375523
620	25.0	9.2	3.7	chr15	90184398	90184613	(11806576)	C	MIRb	SINE/MIR	(0)	268	40	1375845
567	9.9	0.0	0.0	chr15	90620226	90620316	(11370873)	+	L1MB3	LINE/L1	6092	6182	(1)	1376740
3280	13.7	2.6	0.6	chr15	90648416	90648950	(11342239)	+	MER41B	LTR/ERV1	2	547	(87)	1376776
2084	12.1	2.1	0.6	chr15	90657729	90658053	(11333136)	C	MER44A	DNA/TcMar-Tigger	(7)	332	3	1376797
958	15.3	5.2	2.7	chr15	90661411	90661509	(11329680)	+	MER44A	DNA/TcMar-Tigger	2	101	(238)	1376803
32	3.2	0.0	0.0	chr15	90661510	90661541	(11329648)	+	(GA)n	Simple_repeat	1	32	(0)	1376804
958	15.3	5.2	2.7	chr15	90661542	90661602	(11329587)	+	MER44A	DNA/TcMar-Tigger	102	168	(171)	1376803
384	27.7	10.2	5.2	chr15	91469808	91470020	(10521169)	+	MIRb	SINE/MIR	7	231	(37)	1378324
2037	20.0	14.4	1.9	chr15	92634668	92635097	(9356092)	+	MLT2B4	LTR/ERVL	1	494	(62)	1380136
38	4.6	2.2	0.0	chr15	92635098	92635142	(9356047)	+	(CT)n	Simple_repeat	1	46	(0)	1380137
2037	20.0	14.4	1.9	chr15	92635143	92635159	(9356030)	+	MLT2B4	LTR/ERVL	495	521	(35)	1380136
40	2.6	0.0	0.0	chr15	92635160	92635198	(9355991)	+	(CA)n	Simple_repeat	1	39	(0)	1380138
2037	20.0	14.4	1.9	chr15	92635199	92635234	(9355955)	+	MLT2B4	LTR/ERVL	522	556	(0)	1380136
1687	20.6	2.7	10.0	chr15	92833467	92833854	(9157335)	C	MLT2D	LTR/ERVL	(48)	366	1	1380559
31	8.1	0.0	0.0	chr15	92833993	92834032	(9157157)	+	(TC)n	Simple_repeat	1	40	(0)	1380561
888	20.8	15.1	0.8	chr15	92834052	92834289	(9156900)	+	MLT1G3	LTR/ERVL-MaLR	218	495	(100)	1380562
2316	16.3	5.4	1.0	chr15	92866695	92867103	(9124086)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1380656
38	0.0	0.0	0.0	chr15	92867116	92867148	(9124041)	+	(TC)n	Simple_repeat	1	33	(0)	1380657
18	4.7	0.0	0.0	chr15	92900204	92900225	(9090964)	+	(TC)n	Simple_repeat	1	22	(0)	1380713
20	4.2	0.0	0.0	chr15	92906244	92906268	(9084921)	+	(TC)n	Simple_repeat	1	25	(0)	1380714
13	5.3	0.0	0.0	chr15	95285166	95285185	(6706004)	+	(GCA)n	Simple_repeat	1	20	(0)	1384216
1476	20.6	0.0	0.0	chr15	95559902	95560173	(6431016)	C	MER44B	DNA/TcMar-Tigger	(204)	346	75	1384633
1617	15.1	2.2	8.0	chr15	95560172	95560510	(6430679)	+	Tigger7	DNA/TcMar-Tigger	2147	2465	(26)	1384634
36	2.9	0.0	0.0	chr15	95804559	95804593	(6186596)	+	(TC)n	Simple_repeat	1	35	(0)	1384967
30	0.0	0.0	0.0	chr15	95804596	95804621	(6186568)	+	(CA)n	Simple_repeat	1	26	(0)	1384968
3107	26.5	10.5	6.7	chr15	95804622	95805972	(6185217)	+	L1ME3A	LINE/L1	255	1636	(4606)	1384969
808	14.6	11.8	3.0	chr15	95905868	95905892	(6085297)	+	MSTB	LTR/ERVL-MaLR	186	231	(195)	1385098
57	0.0	1.8	1.7	chr15	95905893	95905949	(6085240)	+	(CT)n	Simple_repeat	1	58	(0)	1385099
808	14.6	11.8	3.0	chr15	95905950	95906092	(6085097)	+	MSTB	LTR/ERVL-MaLR	232	371	(55)	1385098
2023	12.8	4.1	0.0	chr15	96273355	96273636	(5717553)	C	AluJb	SINE/Alu	(18)	294	1	1385646
1158	24.8	13.5	4.6	chr15	96284463	96284845	(5706344)	+	MLT1G	LTR/ERVL-MaLR	166	588	(3)	1385667
41	6.4	0.0	0.0	chr15	96284992	96285040	(5706149)	+	(TC)n	Simple_repeat	1	49	(0)	1385669
219	43.0	2.8	0.0	chr15	96285139	96285310	(5705879)	C	L3b	LINE/CR1	(350)	4882	4706	1385670
16	16.8	0.0	0.0	chr15	96330806	96330833	(5660356)	+	(GT)n	Simple_repeat	1	28	(0)	1385726
71	27.5	0.8	3.9	chr15	96331043	96331299	(5659890)	+	(GGC)n	Simple_repeat	1	259	(0)	1385727
15	14.4	4.8	7.6	chr15	96331385	96331447	(5659742)	+	(CCGCCGG)n	Simple_repeat	1	66	(0)	1385728
40	8.1	1.5	1.5	chr15	96331535	96331601	(5659588)	+	(CTC)n	Simple_repeat	1	68	(0)	1385729
21	21.1	0.0	0.0	chr15	96331631	96331679	(5659510)	+	GA-rich	Low_complexity	1	49	(0)	1385730
19	15.5	1.4	9.7	chr15	96331743	96331813	(5659376)	+	(CTCCC)n	Simple_repeat	1	72	(0)	1385731
17	19.2	2.8	0.0	chr15	96333472	96333507	(5657682)	+	(CT)n	Simple_repeat	1	37	(0)	1385736
29	25.4	0.0	4.1	chr15	96357557	96357653	(5633536)	+	(TTTCC)n	Simple_repeat	1	97	(0)	1385754
40	0.0	0.0	0.0	chr15	96357693	96357726	(5633463)	+	(TG)n	Simple_repeat	1	34	(0)	1385755
36	14.7	0.0	0.0	chr15	96357727	96357786	(5633403)	+	(AG)n	Simple_repeat	1	60	(0)	1385756
37	0.0	2.5	2.4	chr15	96445345	96445384	(5545805)	+	(TC)n	Simple_repeat	1	41	(0)	1385884
23	0.0	0.0	0.0	chr15	99182224	99182248	(2808941)	+	(TC)n	Simple_repeat	1	25	(0)	1389734
49	0.0	0.0	0.0	chr15	99182249	99182290	(2808899)	+	(CA)n	Simple_repeat	1	42	(0)	1389735
579	22.5	1.2	1.2	chr15	99182372	99182533	(2808656)	C	L1ME3G	LINE/L1	(753)	171	10	1389736
17	9.1	0.0	0.0	chr15	101014290	101014313	(976876)	+	(TC)n	Simple_repeat	1	24	(0)	1392229
1021	26.5	7.2	10.4	chr15	101159970	101160145	(831044)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	439	1392419
35	0.0	0.0	0.0	chr15	101160146	101160175	(831014)	+	(TC)n	Simple_repeat	1	30	(0)	1392420
1021	26.5	7.2	10.4	chr15	101160176	101160529	(830660)	C	MLT1K	LTR/ERVL-MaLR	(157)	438	83	1392419
2482	6.3	0.0	0.0	chr16	401146	401447	(89936898)	C	AluSg	SINE/Alu	(8)	302	1	1394693
12	19.4	4.7	2.2	chr16	401560	401602	(89936743)	+	(GGAGCCA)n	Simple_repeat	1	45	(0)	1394694
184	29.2	1.5	0.0	chr16	741340	741404	(89596941)	+	L2b	LINE/L2	3294	3359	(16)	1395135
57	0.0	0.0	0.0	chr16	981283	981303	(89357042)	+	(TG)n	Simple_repeat	1	21	(0)	1395376
53	0.0	0.0	0.0	chr16	981304	981348	(89356997)	+	(GA)n	Simple_repeat	1	45	(0)	1395377
57	0.0	0.0	0.0	chr16	981349	981391	(89356954)	+	(TG)n	Simple_repeat	2	44	(0)	1395378
4241	8.2	0.7	2.0	chr16	1293859	1294279	(89044066)	C	MER41A	LTR/ERV1	(130)	424	1	1395699
684	17.3	0.8	6.8	chr16	1294280	1294311	(89044034)	+	AluJr	SINE/Alu	202	229	(83)	1395698
17	10.7	7.1	2.2	chr16	1351946	1351987	(88986358)	+	(GCG)n	Simple_repeat	1	45	(0)	1395772
2405	9.2	0.0	1.6	chr16	1971219	1971535	(88366810)	C	AluSx	SINE/Alu	(0)	312	1	1396735
264	24.6	1.4	0.0	chr16	1971582	1971650	(88366695)	+	L2a	LINE/L2	3338	3407	(19)	1396734
1092	14.7	1.3	3.5	chr16	3085003	3085234	(87253111)	C	THE1D	LTR/ERVL-MaLR	(2)	379	153	1398456
420	12.7	0.0	0.0	chr16	3085236	3085287	(87253058)	+	AluYk11	SINE/Alu	1	52	(259)	1398460
2898	12.1	1.4	0.4	chr16	3085288	3085769	(87252576)	+	LTR15	LTR/ERV1	1	487	(6)	1398461
18	20.0	1.8	3.6	chr16	3100288	3100342	(87238003)	+	G-rich	Low_complexity	1	56	(0)	1398491
13	23.3	0.0	0.0	chr16	3171484	3171518	(87166827)	+	GA-rich	Low_complexity	1	35	(0)	1398649
559	30.3	13.0	2.8	chr16	3846146	3846684	(86491661)	+	L1ME3G	LINE/L1	20	621	(303)	1399901
531	20.0	7.8	4.8	chr16	3870872	3870996	(86467349)	+	FLAM_A	SINE/Alu	1	129	(13)	1399951
54	10.5	4.5	2.6	chr16	3871017	3871139	(86467206)	+	A-rich	Low_complexity	1	125	(0)	1399952
20	4.1	0.0	0.0	chr16	3871175	3871199	(86467146)	+	(TC)n	Simple_repeat	1	25	(0)	1399953
41	0.0	0.0	0.0	chr16	3871200	3871234	(86467111)	+	(CA)n	Simple_repeat	1	35	(0)	1399954
34	22.2	3.5	0.0	chr16	8087777	8087861	(82250484)	+	(TC)n	Simple_repeat	1	88	(0)	1408292
344	30.7	15.6	5.5	chr16	8099526	8099657	(82238688)	+	MIRb	SINE/MIR	17	163	(105)	1408311
2064	12.5	7.9	2.0	chr16	8099658	8100015	(82238330)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1408312
1417	15.9	0.9	1.8	chr16	8710456	8710681	(81627664)	+	AluJr	SINE/Alu	1	224	(88)	1409673
50	2.2	0.0	0.0	chr16	8710684	8710730	(81627615)	+	(GA)n	Simple_repeat	1	47	(0)	1409674
14	10.9	5.0	9.5	chr16	8963818	8963877	(81374468)	+	(TCGGCG)n	Simple_repeat	1	63	(0)	1410168
32	16.0	7.9	1.8	chr16	8963924	8964025	(81374320)	+	(CGCGGAG)n	Simple_repeat	1	108	(0)	1410169
243	26.7	12.6	0.0	chr16	9039241	9039330	(81299015)	+	L2c	LINE/L2	3231	3333	(54)	1410411
34	0.0	0.0	0.0	chr16	9039371	9039399	(81298946)	+	(AG)n	Simple_repeat	1	29	(0)	1410412
35	0.0	0.0	0.0	chr16	9145968	9145997	(81192348)	+	(CT)n	Simple_repeat	1	30	(0)	1410678
25	0.0	0.0	0.0	chr16	9145998	9146025	(81192320)	+	(GT)n	Simple_repeat	1	28	(0)	1410679
50	4.0	0.0	0.0	chr16	9146026	9146077	(81192268)	+	(GA)n	Simple_repeat	1	52	(0)	1410680
21	20.3	3.1	0.0	chr16	9146078	9146109	(81192236)	+	(TCTGTG)n	Simple_repeat	1	34	(0)	1410681
813	20.3	3.4	3.9	chr16	9146110	9146314	(81192031)	C	MER20	DNA/hAT-Charlie	(9)	210	7	1410682
2288	15.0	6.5	5.0	chr16	9624376	9624589	(80713756)	+	MSTA	LTR/ERVL-MaLR	1	218	(210)	1411751
34	0.0	0.0	0.0	chr16	9624590	9624618	(80713727)	+	(CA)n	Simple_repeat	1	29	(0)	1411752
2288	15.0	6.5	5.0	chr16	9624619	9624824	(80713521)	+	MSTA	LTR/ERVL-MaLR	219	428	(0)	1411751
2075	12.2	0.0	2.6	chr16	10358630	10358915	(79979430)	C	AluSx1	SINE/Alu	(28)	284	1	1413322
16	0.0	0.0	0.0	chr16	10358987	10359004	(79979341)	+	(TC)n	Simple_repeat	1	18	(0)	1413324
1230	18.0	2.0	1.2	chr16	10561936	10562188	(79776157)	+	L1M5	LINE/L1	3502	3756	(2390)	1413716
1837	20.6	9.5	1.8	chr16	10562189	10562336	(79776009)	+	MLT1H	LTR/ERVL-MaLR	77	235	(314)	1413717
66	5.4	0.0	0.0	chr16	10562337	10562413	(79775932)	+	(TCTCTC)n	Simple_repeat	1	77	(0)	1413718
1837	20.6	9.5	1.8	chr16	10562414	10562700	(79775645)	+	MLT1H	LTR/ERVL-MaLR	236	548	(1)	1413717
14	15.3	2.6	2.6	chr16	10972372	10972409	(79365936)	+	(TCTCCTG)n	Simple_repeat	1	39	(0)	1414678
899	16.3	0.0	0.0	chr16	11232711	11232845	(79105500)	+	FLAM_C	SINE/Alu	1	135	(8)	1415183
682	15.9	2.3	0.0	chr16	11367561	11367686	(78970659)	+	L1MB7	LINE/L1	5808	5936	(248)	1415522
1230	20.6	0.7	3.4	chr16	11367688	11367978	(78970367)	+	L1MB7	LINE/L1	5845	6127	(57)	1415523
17	0.0	0.0	0.0	chr16	11605135	11605153	(78733192)	+	(CT)n	Simple_repeat	1	19	(0)	1416077
248	28.5	10.4	1.4	chr16	11613607	11613787	(78724558)	C	L2c	LINE/L2	(222)	3165	2970	1416098
2161	8.3	0.3	2.3	chr16	11743274	11743574	(78594771)	+	AluSx1	SINE/Alu	1	295	(17)	1416396
2021	12.1	1.7	3.9	chr16	11814501	11814805	(78523540)	C	AluSx	SINE/Alu	(14)	298	1	1416550
1154	17.8	5.5	6.2	chr16	11814806	11814934	(78523411)	C	AluJb	SINE/Alu	(170)	142	9	1416549
39	2.7	0.0	0.0	chr16	11814951	11814988	(78523357)	+	(TG)n	Simple_repeat	1	38	(0)	1416551
2032	14.2	0.3	0.0	chr16	11814992	11815273	(78523072)	C	AluSp	SINE/Alu	(30)	283	1	1416552
3364	11.6	4.9	1.1	chr16	12611148	12611680	(77726665)	+	MER41A	LTR/ERV1	1	554	(0)	1418242
2142	10.9	5.8	1.4	chr16	13619322	13619685	(76718660)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1420505
2180	22.5	14.5	5.7	chr16	13619690	13619987	(76718358)	+	LTR8B	LTR/ERV1	30	417	(403)	1420504
730	22.7	3.0	0.0	chr16	13906950	13907077	(76431268)	+	FLAM_A	SINE/Alu	1	132	(10)	1421125
65	1.7	0.0	0.0	chr16	13907087	13907146	(76431199)	+	(GA)n	Simple_repeat	1	60	(0)	1421126
660	16.9	7.1	6.0	chr16	13907216	13907397	(76430948)	+	Charlie18a	DNA/hAT-Charlie	159	342	(0)	1421127
17	4.9	0.0	0.0	chr16	14000100	14000120	(76338225)	+	(GA)n	Simple_repeat	1	21	(0)	1421280
1941	13.0	0.0	0.4	chr16	15264295	15264600	(75073745)	C	AluSz	SINE/Alu	(0)	312	19	1423949
15	20.4	0.0	2.4	chr16	15264633	15264689	(75073656)	+	(TTCTTCC)n	Simple_repeat	1	55	(0)	1423950
1183	16.2	6.0	0.0	chr16	15264698	15264901	(75073444)	+	MSTB1	LTR/ERVL-MaLR	203	419	(13)	1423946
541	22.5	4.8	9.2	chr16	15288180	15288375	(75049970)	+	MLT1A	LTR/ERVL-MaLR	1	187	(187)	1424015
19	25.7	0.0	0.0	chr16	15288376	15288421	(75049924)	+	(TC)n	Simple_repeat	1	46	(0)	1424016
736	25.3	1.1	1.6	chr16	15288435	15288623	(75049722)	+	MLT1A	LTR/ERVL-MaLR	181	368	(6)	1424015
556	18.0	7.5	0.9	chr16	15421377	15421488	(74916857)	+	MER5A1	DNA/hAT-Charlie	1	120	(46)	1424352
37	0.0	0.0	0.0	chr16	15421582	15421613	(74916732)	+	(TC)n	Simple_repeat	1	32	(0)	1424353
1521	18.7	0.4	0.4	chr16	15421624	15421874	(74916471)	C	AluJr	SINE/Alu	(61)	251	1	1424354
436	26.3	17.1	2.2	chr16	15509315	15509493	(74828852)	+	MIRb	SINE/MIR	13	223	(45)	1424569
225	31.4	6.8	3.9	chr16	15509457	15509641	(74828704)	C	MIRb	SINE/MIR	(65)	197	4	1424570
4662	9.3	1.9	0.3	chr16	15570564	15571187	(74767158)	C	MER41B	LTR/ERV1	(0)	634	1	1424735
467	18.9	0.0	16.9	chr16	15571188	15571236	(74767109)	C	MER20	DNA/hAT-Charlie	(143)	76	36	1424734
1205	23.6	2.4	13.2	chr16	15571270	15571359	(74766986)	+	MER4C	LTR/ERV1	1	83	(382)	1424736
18	10.7	4.8	2.3	chr16	16931095	16931136	(73407209)	+	G-rich	Low_complexity	1	44	(0)	1427982
1766	20.8	9.3	5.6	chr16	17589426	17589555	(72748790)	+	MLT1D	LTR/ERVL-MaLR	1	117	(388)	1429433
38	0.0	0.0	0.0	chr16	17589556	17589588	(72748757)	+	(AG)n	Simple_repeat	1	33	(0)	1429434
1766	20.8	9.3	5.6	chr16	17589589	17589942	(72748403)	+	MLT1D	LTR/ERVL-MaLR	118	504	(1)	1429433
232	27.9	6.5	5.8	chr16	17635715	17635851	(72702494)	+	L1M5	LINE/L1	5583	5720	(404)	1429535
13	16.2	0.0	0.0	chr16	17635865	17635892	(72702453)	+	GA-rich	Low_complexity	1	28	(0)	1429536
19	18.2	4.3	4.1	chr16	17635891	17635911	(72702434)	+	(AGACGG)n	Simple_repeat	1	20	(0)	1429537
43	0.0	0.0	0.0	chr16	17635912	17635948	(72702397)	+	(AG)n	Simple_repeat	1	37	(0)	1429538
13	17.0	3.0	0.0	chr16	17635953	17635985	(72702360)	+	GA-rich	Low_complexity	1	34	(0)	1429539
19	18.2	4.3	4.1	chr16	17635986	17635996	(72702349)	+	(AGACGG)n	Simple_repeat	7	51	(0)	1429540
967	30.1	6.3	9.2	chr16	18014274	18014708	(72323637)	C	L1M5	LINE/L1	(854)	5292	4852	1430281
46	6.0	0.0	0.0	chr16	18014709	18014761	(72323584)	+	(TC)n	Simple_repeat	1	53	(0)	1430282
967	30.1	6.3	9.2	chr16	18014762	18015111	(72323234)	C	L1M5	LINE/L1	(1295)	4851	4531	1430281
3402	11.3	1.6	1.0	chr16	19283199	19283682	(71054663)	C	LTR45B	LTR/ERV1	(0)	489	3	1433167
1686	22.3	2.5	3.7	chr16	19283683	19284002	(71054343)	+	MSTD	LTR/ERVL-MaLR	80	396	(0)	1433166
55	4.0	5.1	0.0	chr16	20074895	20074972	(70263373)	+	(GA)n	Simple_repeat	1	82	(0)	1435078
30	0.0	0.0	0.0	chr16	20944777	20944802	(69393543)	+	(AC)n	Simple_repeat	1	26	(0)	1436771
370	26.2	8.0	1.9	chr16	20944924	20944973	(69393372)	+	MIRb	SINE/MIR	35	84	(184)	1436772
4413	10.9	1.7	0.9	chr16	20944974	20945480	(69392865)	+	MER41B	LTR/ERV1	1	504	(130)	1436773
2836	17.9	2.7	5.8	chr16	21007477	21008089	(69330256)	C	L1MB8	LINE/L1	(780)	5366	4765	1436939
30	3.0	2.9	0.0	chr16	21008185	21008218	(69330127)	+	(TC)n	Simple_repeat	1	35	(0)	1436942
1450	29.7	6.0	5.1	chr16	21008235	21008897	(69329448)	C	HAL1b	LINE/L1	(1752)	669	1	1436935
46	0.0	0.0	0.0	chr16	21935154	21935192	(68403153)	+	(TG)n	Simple_repeat	1	39	(0)	1438960
12	23.9	0.0	0.0	chr16	22437078	22437112	(67901233)	+	(CCTCCT)n	Simple_repeat	1	35	(0)	1440063
22	24.3	0.0	1.7	chr16	22437242	22437301	(67901044)	+	(TCC)n	Simple_repeat	1	60	(0)	1440064
1389	19.5	5.3	13.7	chr16	22643062	22643274	(67695071)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	174	1440508
34	3.0	0.0	0.0	chr16	22643275	22643308	(67695037)	+	(GA)n	Simple_repeat	1	34	(0)	1440509
1389	19.5	5.3	13.7	chr16	22643309	22643361	(67694984)	C	MLT1A	LTR/ERVL-MaLR	(201)	173	151	1440508
2191	10.9	0.3	0.0	chr16	22643362	22643644	(67694701)	+	AluSp	SINE/Alu	1	284	(29)	1440510
2037	11.5	14.8	3.2	chr16	22844510	22844730	(67493615)	+	MSTA	LTR/ERVL-MaLR	2	248	(180)	1440937
26	6.3	0.0	0.0	chr16	22844731	22844764	(67493581)	+	(CTTCAC)n	Simple_repeat	1	34	(0)	1440938
2037	11.5	14.8	3.2	chr16	22844765	22844845	(67493500)	+	MSTA	LTR/ERVL-MaLR	249	363	(65)	1440937
2461	9.7	0.0	0.0	chr16	22844846	22845153	(67493192)	C	AluY	SINE/Alu	(3)	308	1	1440939
1855	15.6	0.3	0.7	chr16	23133794	23134076	(67204269)	+	AluJb	SINE/Alu	1	282	(30)	1441490
40	0.0	0.0	0.0	chr16	23134090	23134123	(67204222)	+	(CA)n	Simple_repeat	1	34	(0)	1441491
31	24.2	1.4	0.0	chr16	23143537	23143624	(67194721)	+	GA-rich	Low_complexity	1	89	(0)	1441504
884	19.9	3.2	0.0	chr16	23143700	23143880	(67194465)	C	MER20	DNA/hAT-Charlie	(4)	215	29	1441505
2690	13.0	16.3	3.9	chr16	23596928	23597462	(66740883)	C	LTR18B	LTR/ERVL	(0)	614	1	1442650
330	21.3	13.9	11.0	chr16	23597463	23597585	(66740760)	+	HAL1b	LINE/L1	1844	1991	(430)	1442649
307	27.5	8.7	5.0	chr16	23717004	23717253	(66621092)	+	MamGypLTR1c	LTR/Gypsy	14	451	(362)	1442927
22	13.2	0.0	6.4	chr16	23717342	23717388	(66620957)	+	GA-rich	Low_complexity	1	47	(0)	1442928
2280	8.5	0.0	3.8	chr16	23717605	23717921	(66620424)	+	AluSz	SINE/Alu	1	305	(7)	1442929
34	27.9	2.6	4.4	chr16	23717996	23718149	(66620196)	+	GA-rich	Low_complexity	1	158	(0)	1442930
2179	9.7	0.7	0.0	chr16	23718182	23718459	(66619886)	+	AluSx1	SINE/Alu	1	280	(32)	1442931
20	28.1	5.2	0.0	chr16	23855121	23855197	(66483148)	+	GA-rich	Low_complexity	1	81	(0)	1443293
386	30.6	7.1	2.1	chr16	23855235	23855421	(66482924)	+	MIRc	SINE/MIR	9	205	(63)	1443294
15	0.0	0.0	0.0	chr16	23857702	23857718	(66480627)	+	(GA)n	Simple_repeat	1	17	(0)	1443300
20	4.1	0.0	0.0	chr16	23857718	23857742	(66480603)	+	(GT)n	Simple_repeat	1	25	(0)	1443301
269	23.3	0.0	0.0	chr16	23859712	23859771	(66478574)	+	L3	LINE/CR1	3702	3761	(338)	1443307
38	6.4	0.0	0.0	chr16	23859869	23859917	(66478428)	+	(GA)n	Simple_repeat	1	49	(0)	1443308
15	0.0	0.0	0.0	chr16	23863913	23863929	(66474416)	+	(TC)n	Simple_repeat	1	17	(0)	1443322
2214	12.3	0.3	0.0	chr16	24072573	24072880	(66265465)	C	AluSq2	SINE/Alu	(4)	309	1	1443811
465	33.2	11.9	3.3	chr16	24227483	24227593	(66110752)	C	L2a	LINE/L2	(573)	2846	2712	1444136
24	0.0	0.0	0.0	chr16	24227657	24227682	(66110663)	+	(AC)n	Simple_repeat	1	26	(0)	1444145
44	0.0	0.0	0.0	chr16	24227683	24227720	(66110625)	+	(AG)n	Simple_repeat	1	38	(0)	1444146
70	0.0	0.0	0.0	chr16	24257369	24257428	(66080917)	+	(GA)n	Simple_repeat	1	60	(0)	1444215
1364	15.2	0.0	5.5	chr16	24840970	24841205	(65497140)	C	AluJb	SINE/Alu	(89)	223	1	1445623
33	3.1	0.0	0.0	chr16	24841309	24841341	(65497004)	+	(AG)n	Simple_repeat	1	33	(0)	1445624
265	20.1	2.5	7.6	chr16	24841397	24841524	(65496821)	C	MIRc	SINE/MIR	(77)	185	72	1445625
529	33.0	3.0	2.0	chr16	24851666	24851866	(65486479)	C	MIR	SINE/MIR	(43)	219	17	1445656
30	0.0	0.0	0.0	chr16	24851970	24851995	(65486350)	+	(TC)n	Simple_repeat	1	26	(0)	1445657
401	30.9	2.9	0.0	chr16	26978705	26978840	(63359505)	C	MLT1K	LTR/ERVL-MaLR	(8)	587	448	1450095
75	18.0	4.0	1.1	chr16	26978848	26979021	(63359324)	+	(CT)n	Simple_repeat	1	181	(0)	1450096
12	13.7	0.0	0.0	chr16	26979172	26979195	(63359150)	+	(CCT)n	Simple_repeat	1	24	(0)	1450097
2095	14.8	0.7	0.0	chr16	27098305	27098614	(63239731)	C	AluSx1	SINE/Alu	(0)	312	1	1450356
1478	16.7	5.1	7.6	chr16	27098615	27098957	(63239388)	C	MLT1B	LTR/ERVL-MaLR	(56)	334	1	1450355
12	27.3	2.0	2.0	chr16	27109836	27109885	(63228460)	+	(GCG)n	Simple_repeat	1	51	(0)	1450386
28	0.0	0.0	0.0	chr16	27110175	27110201	(63228144)	+	(T)n	Simple_repeat	1	27	(0)	1450387
48	2.1	0.0	2.0	chr16	27285116	27285165	(63053180)	+	(AG)n	Simple_repeat	1	50	(0)	1450769
855	24.6	7.2	0.2	chr16	27298299	27298552	(63039793)	C	L1ME2	LINE/L1	(218)	6141	5855	1450808
30	11.0	0.0	0.0	chr16	27298654	27298702	(63039643)	+	(TGTG)n	Simple_repeat	1	49	(0)	1450809
34	0.0	0.0	0.0	chr16	27298703	27298731	(63039614)	+	(GA)n	Simple_repeat	1	29	(0)	1450810
1819	14.7	2.1	0.7	chr16	27298732	27299010	(63039335)	+	AluJb	SINE/Alu	2	284	(28)	1450811
82	3.6	1.1	0.0	chr16	28322920	28323006	(62015339)	+	(CT)n	Simple_repeat	1	88	(0)	1453210
254	19.4	6.1	1.6	chr16	28323039	28323101	(62015244)	C	MIR3	SINE/MIR	(3)	205	140	1453211
20	0.0	0.0	0.0	chr16	29666503	29666524	(60671821)	+	(CT)n	Simple_repeat	1	22	(0)	1456243
34	0.0	0.0	0.0	chr16	29666525	29666553	(60671792)	+	(CA)n	Simple_repeat	1	29	(0)	1456244
1557	22.6	7.9	4.8	chr16	29679667	29679959	(60658386)	C	LTR14C	LTR/ERVK	(41)	546	152	1456282
32	25.2	1.2	1.1	chr16	29898383	29898468	(60439877)	+	(CT)n	Simple_repeat	1	87	(0)	1456814
3478	12.0	7.8	2.0	chr16	29943444	29943749	(60394596)	+	LTR19B	LTR/ERV1	240	580	(0)	1456931
1351	16.6	2.7	2.7	chr16	29943750	29943868	(60394477)	C	AluJb	SINE/Alu	(161)	151	27	1456928
11	24.4	0.0	0.0	chr16	29974030	29974063	(60364282)	+	G-rich	Low_complexity	1	34	(0)	1457008
24	20.8	0.0	1.8	chr16	30335132	30335188	(60003157)	+	GA-rich	Low_complexity	1	57	(0)	1457788
16	19.9	0.0	0.0	chr16	30335313	30335347	(60002998)	+	GA-rich	Low_complexity	1	35	(0)	1457789
861	20.0	1.2	1.8	chr16	30549558	30549599	(59788746)	C	AluJb	SINE/Alu	(142)	170	128	1458312
2374	10.1	0.0	0.3	chr16	30549600	30549906	(59788439)	C	AluSc	SINE/Alu	(2)	307	2	1458313
1847	13.2	4.3	0.3	chr16	30572583	30572871	(59765474)	C	AluJr	SINE/Alu	(11)	301	1	1458367
13	22.4	0.0	4.4	chr16	30650822	30650866	(59687479)	+	G-rich	Low_complexity	1	45	(0)	1458569
14	19.0	4.8	8.0	chr16	30722472	30722530	(59615815)	+	(TCTCT)n	Simple_repeat	1	78	(10)	1458738
15	5.6	0.0	0.0	chr16	30722531	30722549	(59615796)	+	(TC)n	Simple_repeat	1	19	(0)	1458739
14	19.0	4.8	8.0	chr16	30722550	30722555	(59615790)	+	(TCTCT)n	Simple_repeat	79	88	(0)	1458738
12	32.6	0.0	4.3	chr16	30722647	30722716	(59615629)	+	(CCCCTA)n	Simple_repeat	1	70	(0)	1458740
12	28.1	3.9	0.0	chr16	30775721	30775772	(59562573)	+	(CTGGCG)n	Simple_repeat	1	54	(0)	1458832
210	31.6	7.3	5.8	chr16	30956924	30957044	(59381301)	+	MIR1_Amn	SINE/MIR	31	153	(77)	1459288
283	27.2	9.8	6.4	chr16	31034547	31034717	(59303628)	C	MIR3	SINE/MIR	(33)	175	3	1459457
2319	11.3	0.0	0.7	chr16	31452981	31453289	(58885056)	C	AluSx	SINE/Alu	(0)	312	6	1460351
1922	21.0	2.1	0.7	chr16	46572891	46573350	(43764995)	+	L1MB7	LINE/L1	5700	6166	(18)	1465628
344	32.4	2.6	0.9	chr16	46621615	46621726	(43716619)	+	MIRc	SINE/MIR	4	117	(151)	1465698
31	0.0	0.0	0.0	chr16	46621815	46621841	(43716504)	+	(AC)n	Simple_repeat	1	27	(0)	1465699
21	0.0	0.0	0.0	chr16	46621842	46621864	(43716481)	+	(GA)n	Simple_repeat	1	23	(0)	1465700
748	28.6	6.8	0.0	chr16	46621947	46622152	(43716193)	C	MIR	SINE/MIR	(1)	261	41	1465701
16	22.4	3.2	3.1	chr16	46691893	46691918	(43646427)	+	(CTCTTT)n	Simple_repeat	1	40	(0)	1465824
24	3.0	2.7	2.6	chr16	46691919	46691932	(43646413)	+	(CT)n	Simple_repeat	1	14	(0)	1465825
31	0.0	0.0	0.0	chr16	46691933	46691959	(43646386)	+	(CA)n	Simple_repeat	1	27	(0)	1465826
24	3.0	2.7	2.6	chr16	46691960	46691981	(43646364)	+	(CT)n	Simple_repeat	1	22	(0)	1465827
18	14.7	0.0	0.0	chr16	46758223	46758252	(43580093)	+	(AC)n	Simple_repeat	1	30	(0)	1465972
42	0.0	0.0	2.0	chr16	46758256	46758266	(43580079)	+	(CT)n	Simple_repeat	1	11	(0)	1465973
46	0.0	0.0	0.0	chr16	46758267	46758305	(43580040)	+	(CA)n	Simple_repeat	1	39	(0)	1465974
42	0.0	0.0	2.0	chr16	46758306	46758343	(43580002)	+	(CT)n	Simple_repeat	2	39	(0)	1465975
326	34.3	4.1	4.9	chr16	46758402	46758625	(43579720)	C	MIRb	SINE/MIR	(26)	242	21	1465976
12	17.5	3.1	0.0	chr16	47038159	47038190	(43300155)	+	G-rich	Low_complexity	1	33	(0)	1466605
236	28.8	1.5	1.5	chr16	47038395	47038461	(43299884)	+	MIR	SINE/MIR	82	148	(114)	1466606
369	21.3	0.1	2.2	chr16	47042622	47042717	(43295628)	+	L1ME4a	LINE/L1	5982	6062	(62)	1466622
16	9.6	0.0	0.0	chr16	47042784	47042806	(43295539)	+	(AG)n	Simple_repeat	1	23	(0)	1466623
14	29.7	2.4	4.6	chr16	47042807	47042867	(43295478)	+	GA-rich	Low_complexity	2	87	(0)	1466624
11	17.7	5.0	2.4	chr16	47042875	47042914	(43295431)	+	(AGAGGC)n	Simple_repeat	1	42	(0)	1466625
2332	10.6	1.0	0.0	chr16	47042989	47043289	(43295056)	C	AluSx	SINE/Alu	(8)	304	1	1466626
1208	23.9	5.1	5.1	chr16	47952925	47953116	(42385229)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	174	1467870
66	3.1	0.0	0.0	chr16	47953117	47953181	(42385164)	+	(AG)n	Simple_repeat	1	65	(0)	1467871
1208	23.9	5.1	5.1	chr16	47953182	47953362	(42384983)	C	MLT1A	LTR/ERVL-MaLR	(201)	173	1	1467870
2132	18.6	5.2	2.9	chr16	47953363	47953591	(42384754)	C	MER31B	LTR/ERV1	(228)	238	3	1467869
2277	12.0	12.4	2.1	chr16	48063720	48064102	(42274243)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1468060
1078	16.7	24.8	0.4	chr16	48409793	48410020	(41928325)	C	AluSz	SINE/Alu	(10)	302	1	1468714
2168	14.2	0.7	0.0	chr16	50278863	50279171	(40059174)	C	AluSz6	SINE/Alu	(1)	311	1	1472194
613	28.9	12.6	7.6	chr16	50394507	50394879	(39943466)	+	MLT1K	LTR/ERVL-MaLR	48	437	(158)	1472385
32	3.2	0.0	0.0	chr16	50394880	50394911	(39943434)	+	(GA)n	Simple_repeat	1	32	(0)	1472386
613	28.9	12.6	7.6	chr16	50394912	50395053	(39943292)	+	MLT1K	LTR/ERVL-MaLR	438	593	(2)	1472385
611	25.2	7.6	8.7	chr16	50666838	50667089	(39671256)	+	MLT1K	LTR/ERVL-MaLR	335	583	(12)	1472952
393	31.4	9.0	0.3	chr16	53129825	53130015	(37208330)	C	MIR3	SINE/MIR	(7)	201	3	1477319
265	35.6	5.6	0.0	chr16	53517902	53518019	(36820326)	C	MIR3	SINE/MIR	(15)	193	69	1477975
2389	11.9	11.7	1.1	chr16	54873973	54874354	(35463991)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1480324
1561	23.9	12.4	3.4	chr16	55427295	55427620	(34910725)	C	MLT1F2	LTR/ERVL-MaLR	(9)	551	196	1481397
52	0.0	2.1	0.0	chr16	55427621	55427668	(34910677)	+	(AG)n	Simple_repeat	1	49	(0)	1481398
1561	23.9	12.4	3.4	chr16	55427669	55427839	(34910506)	C	MLT1F2	LTR/ERVL-MaLR	(365)	195	3	1481397
112	18.8	6.5	0.0	chr16	55847136	55847414	(34490931)	+	(CT)n	Simple_repeat	1	297	(0)	1482109
42	0.0	0.0	0.0	chr16	56004222	56004257	(34334088)	+	(CT)n	Simple_repeat	1	36	(0)	1482368
11320	17.2	3.2	4.6	chr16	56033966	56035090	(34303255)	C	L1MD1	LINE/L1	(1567)	4970	3866	1482412
20	23.8	3.6	3.5	chr16	56191467	56191550	(34146795)	+	(TCCCTC)n	Simple_repeat	1	87	(0)	1482660
4594	26.5	10.1	6.0	chr16	56254181	56256630	(34081715)	C	L1MEj	LINE/L1	(3480)	2666	1	1482773
277	22.4	0.0	0.0	chr16	56256650	56256716	(34081629)	+	HERVFH21-int	LTR/ERV1	26	92	(6437)	1482774
48	0.0	0.0	0.0	chr16	56256719	56256759	(34081586)	+	(TG)n	Simple_repeat	1	41	(0)	1482775
852	27.6	5.2	0.8	chr16	56256882	56257140	(34081205)	+	MER113	DNA/hAT-Charlie	1	271	(250)	1482776
358	19.7	10.2	0.8	chr16	57300190	57300285	(33038060)	+	AluJb	SINE/Alu	209	293	(9)	1484767
625	8.4	0.0	0.0	chr16	57300480	57300562	(33037783)	C	tRNA-Leu-CTG	tRNA	(3)	83	1	1484768
54	0.0	0.0	0.0	chr16	57311442	57311487	(33026858)	+	(GT)n	Simple_repeat	1	46	(0)	1484798
18	0.0	4.3	0.0	chr16	57311489	57311511	(33026834)	+	(AG)n	Simple_repeat	1	24	(0)	1484799
1901	14.8	0.0	0.0	chr16	57311609	57311879	(33026466)	C	AluJb	SINE/Alu	(19)	293	23	1484800
78	12.3	4.3	0.0	chr16	57475661	57475798	(32862547)	+	(TC)n	Simple_repeat	1	144	(0)	1485138
5041	22.3	3.5	4.1	chr16	57555501	57555775	(32782570)	C	L1ME1	LINE/L1	(3543)	3398	3111	1485302
1945	15.1	14.9	1.1	chr16	57555776	57556143	(32782202)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1485308
1617	22.2	13.8	0.8	chr16	57595618	57596102	(32742243)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	1	1485381
1048	16.5	1.2	0.0	chr16	57621979	57622142	(32716203)	+	FRAM	SINE/Alu	1	166	(10)	1485442
232	33.6	8.8	0.9	chr16	57622204	57622308	(32716037)	C	MIR	SINE/MIR	(84)	178	65	1485443
12	24.9	0.0	8.8	chr16	57689516	57689583	(32648762)	+	A-rich	Low_complexity	1	68	(0)	1485579
307	28.9	17.6	2.6	chr16	57691615	57691801	(32646544)	+	MIRb	SINE/MIR	10	231	(37)	1485585
431	21.3	0.9	8.5	chr16	57810710	57810827	(32527518)	C	MIRb	SINE/MIR	(36)	232	124	1485788
262	34.6	0.9	0.9	chr16	57810909	57811016	(32527329)	+	MIR3	SINE/MIR	64	171	(37)	1485789
1020	17.0	5.9	0.0	chr16	57811173	57811378	(32526967)	+	L1MB7	LINE/L1	5956	6174	(10)	1485790
13	24.9	4.4	0.0	chr16	57811381	57811425	(32526920)	+	GA-rich	Low_complexity	1	47	(0)	1485791
1887	13.4	0.3	6.9	chr16	57811441	57811633	(32526712)	+	AluJr	SINE/Alu	1	189	(123)	1485792
2263	10.1	1.0	1.9	chr16	57811634	57811941	(32526404)	+	AluSz	SINE/Alu	1	305	(7)	1485793
1147	15.5	4.3	1.0	chr16	57929268	57929498	(32408847)	C	THE1D	LTR/ERVL-MaLR	(0)	465	185	1486083
1276	12.6	6.0	12.6	chr16	57929502	57929857	(32408488)	C	THE1D	LTR/ERVL-MaLR	(48)	333	3	1486084
52	8.4	2.6	0.0	chr16	58267987	58268063	(32070282)	+	(GA)n	Simple_repeat	1	79	(0)	1486770
404	32.8	4.2	5.1	chr16	58268105	58268319	(32070026)	C	MamRep137	DNA/TcMar?	(289)	221	9	1486746
1019	16.6	2.7	1.1	chr16	58437389	58437570	(31900775)	+	MLT1A	LTR/ERVL-MaLR	3	193	(274)	1487102
34	0.0	0.0	0.0	chr16	58437571	58437599	(31900746)	+	(CT)n	Simple_repeat	1	29	(0)	1487103
661	24.8	16.1	8.4	chr16	58437600	58437656	(31900689)	+	MLT1A	LTR/ERVL-MaLR	194	240	(227)	1487102
2053	15.7	0.3	1.3	chr16	58437657	58437968	(31900377)	+	AluJo	SINE/Alu	1	309	(3)	1487104
1941	12.6	8.7	2.2	chr16	58830081	58830262	(31508083)	+	THE1D	LTR/ERVL-MaLR	1	210	(171)	1487926
68	0.0	0.0	0.0	chr16	58830263	58830320	(31508025)	+	(TC)n	Simple_repeat	1	58	(0)	1487927
1941	12.6	8.7	2.2	chr16	58830321	58830493	(31507852)	+	THE1D	LTR/ERVL-MaLR	211	380	(1)	1487926
1142	17.0	9.5	9.7	chr16	58830494	58830505	(31507840)	+	MER44A	DNA/TcMar-Tigger	331	339	(0)	1487924
38	0.0	2.4	2.4	chr16	58936845	58936885	(31401460)	+	(GA)n	Simple_repeat	1	42	(0)	1488101
287	27.7	0.0	0.0	chr16	58936993	58937057	(31401288)	+	MER2	DNA/TcMar-Tigger	1	65	(280)	1488102
18	14.7	0.0	0.0	chr16	65698966	65698995	(24639350)	+	(AG)n	Simple_repeat	1	30	(0)	1498365
3900	11.0	2.3	1.4	chr16	65768863	65769426	(24568919)	C	MER61E	LTR/ERV1	(0)	569	1	1498482
464	26.1	5.7	2.8	chr16	66516691	66516905	(23821440)	C	L2a	LINE/L2	(25)	3401	3133	1499878
260	32.1	19.3	2.0	chr16	66560424	66560773	(23777572)	C	L2b	LINE/L2	(904)	2515	2091	1499960
47	0.0	0.0	0.0	chr16	66560799	66560838	(23777507)	+	(AC)n	Simple_repeat	1	40	(0)	1499961
32	32.4	1.4	2.7	chr16	66604020	66604163	(23734182)	+	(TG)n	Simple_repeat	1	146	(0)	1500045
203	37.8	0.0	3.0	chr16	66880966	66881096	(23457249)	C	MIRb	SINE/MIR	(116)	152	26	1500614
281	32.8	3.0	0.0	chr16	66899830	66899960	(23438385)	+	L1M5	LINE/L1	5669	5803	(320)	1500654
870	16.1	0.0	0.0	chr16	66906074	66906197	(23432148)	C	AluJr	SINE/Alu	(188)	124	1	1500662
1294	17.5	14.4	2.1	chr16	67330888	67331060	(23007285)	C	MSTD	LTR/ERVL-MaLR	(1)	395	211	1501452
58	1.9	0.0	0.0	chr16	67331061	67331114	(23007231)	+	(GA)n	Simple_repeat	1	54	(0)	1501453
1294	17.5	14.4	2.1	chr16	67331115	67331267	(23007078)	C	MSTD	LTR/ERVL-MaLR	(186)	210	23	1501452
1530	17.1	2.3	0.4	chr16	67331282	67331532	(23006813)	+	AluJr	SINE/Alu	35	290	(22)	1501454
29	0.0	0.0	0.0	chr16	67822567	67822591	(22515754)	+	(AG)n	Simple_repeat	1	25	(0)	1502437
229	23.6	0.7	8.7	chr16	67822682	67822775	(22515570)	C	L2b	LINE/L2	(0)	3426	3317	1502438
237	34.9	4.4	0.0	chr16	67822785	67822870	(22515475)	C	MIRb	SINE/MIR	(174)	94	5	1502439
12	27.1	0.0	3.9	chr16	68264971	68265022	(22073323)	+	(TGTGAC)n	Simple_repeat	1	52	(0)	1503254
837	27.6	4.2	0.8	chr16	68381482	68381766	(21956579)	+	MLT1I	LTR/ERVL-MaLR	60	340	(71)	1503446
15	8.7	0.0	0.0	chr16	68704586	68704610	(21633735)	+	(AGGG)n	Simple_repeat	1	25	(0)	1504108
223	30.7	11.9	3.5	chr16	68704723	68704773	(21633572)	C	MIRb	SINE/MIR	(89)	179	130	1504109
15	21.2	2.2	0.0	chr16	69071996	69072026	(21266319)	+	GA-rich	Low_complexity	1	32	(0)	1505018
49	0.0	0.0	0.0	chr16	69072027	69072068	(21266277)	+	(GT)n	Simple_repeat	1	42	(0)	1505019
15	21.2	2.2	0.0	chr16	69072069	69072081	(21266264)	+	GA-rich	Low_complexity	33	45	(0)	1505020
18	4.5	0.0	0.0	chr16	69072084	69072106	(21266239)	+	(GT)n	Simple_repeat	1	23	(0)	1505021
37	0.0	0.0	0.0	chr16	69072123	69072154	(21266191)	+	(GT)n	Simple_repeat	1	32	(0)	1505021
13	24.9	2.0	2.0	chr16	69311577	69311625	(21026720)	+	G-rich	Low_complexity	1	50	(0)	1505548
23	3.7	0.0	0.0	chr16	69699809	69699836	(20638509)	+	(TC)n	Simple_repeat	1	28	(0)	1506361
40	2.6	0.0	0.0	chr16	69699837	69699875	(20638470)	+	(TG)n	Simple_repeat	1	39	(0)	1506362
1643	11.0	0.0	0.5	chr16	70415534	70415751	(19922594)	C	AluSz	SINE/Alu	(94)	218	2	1507939
18	9.8	3.0	0.0	chr16	71593515	71593547	(18744798)	+	(TTTTG)n	Simple_repeat	1	34	(0)	1509970
35	15.4	0.0	0.0	chr16	71593570	71593605	(18744740)	+	(TCTC)n	Simple_repeat	1	36	(0)	1509971
52	0.0	2.1	0.0	chr16	71593606	71593653	(18744692)	+	(TG)n	Simple_repeat	1	49	(0)	1509972
35	15.4	0.0	0.0	chr16	71593654	71593683	(18744662)	+	(TCTC)n	Simple_repeat	1	30	(0)	1509973
2170	9.9	0.7	0.7	chr16	71946977	71947269	(18391076)	+	AluSq2	SINE/Alu	3	295	(18)	1510692
835	13.8	0.0	0.0	chr16	72093009	72093124	(18245221)	C	FLAM_A	SINE/Alu	(16)	126	11	1510969
12	20.2	0.0	6.7	chr16	72195790	72195834	(18142511)	+	(GGCTG)n	Simple_repeat	1	45	(0)	1511110
59	0.0	0.0	0.0	chr16	72195982	72196031	(18142314)	+	(TG)n	Simple_repeat	1	50	(0)	1511111
22	7.3	0.0	0.0	chr16	72196034	72196062	(18142283)	+	(AG)n	Simple_repeat	1	29	(0)	1511112
63	0.0	0.0	0.0	chr16	72284988	72285041	(18053304)	+	(TC)n	Simple_repeat	1	54	(0)	1511244
801	16.5	0.0	0.0	chr16	72311604	72311718	(18026627)	+	AluJb	SINE/Alu	1	115	(197)	1511286
32	3.2	0.0	0.0	chr16	72311742	72311773	(18026572)	+	(GA)n	Simple_repeat	1	32	(0)	1511287
13	16.1	0.0	0.0	chr16	72311792	72311819	(18026526)	+	A-rich	Low_complexity	1	28	(0)	1511288
607	36.7	0.5	1.0	chr16	72311862	72312062	(18026283)	C	MIRb	SINE/MIR	(67)	201	2	1511289
18	0.0	0.0	0.0	chr16	73070711	73070730	(17267615)	+	(TC)n	Simple_repeat	1	20	(0)	1512351
75	15.5	3.5	0.0	chr16	73543845	73543988	(16794357)	+	GA-rich	Low_complexity	1	149	(0)	1513167
14	18.4	4.4	2.1	chr16	74700913	74700957	(15637388)	+	(CCTT)n	Simple_repeat	1	47	(0)	1515259
717	13.8	0.9	1.7	chr16	75073011	75073118	(15265227)	+	AluJo	SINE/Alu	4	111	(201)	1516058
45	2.4	0.0	0.0	chr16	75073119	75073161	(15265184)	+	(TC)n	Simple_repeat	1	43	(0)	1516059
31	23.0	0.0	0.0	chr16	75073169	75073240	(15265105)	+	(TATA)n	Simple_repeat	1	72	(0)	1516060
920	28.5	9.0	6.2	chr16	75073307	75073868	(15264477)	C	L1ME5	LINE/L1	(0)	6194	5616	1516061
3462	18.1	3.7	3.6	chr16	75084919	75085725	(15252620)	C	L1ME2z	LINE/L1	(167)	6277	5470	1516084
2182	19.9	7.8	3.7	chr16	75085752	75085786	(15252559)	C	MLT2B1	LTR/ERVL	(2)	518	484	1516085
32	3.2	0.0	0.0	chr16	75085787	75085818	(15252527)	+	(AG)n	Simple_repeat	1	32	(0)	1516086
2182	19.9	7.8	3.7	chr16	75085819	75086263	(15252082)	C	MLT2B1	LTR/ERVL	(37)	483	17	1516085
324	19.6	6.4	2.6	chr16	75509838	75509996	(14828349)	+	MLT1B	LTR/ERVL-MaLR	133	400	(67)	1516944
53	0.0	0.0	0.0	chr16	75509997	75510041	(14828304)	+	(TG)n	Simple_repeat	1	45	(0)	1516945
1888	15.3	5.2	5.2	chr16	75702307	75702671	(14635674)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1517341
29	6.2	0.0	0.0	chr16	79601656	79601689	(10736656)	+	(AC)n	Simple_repeat	1	34	(0)	1523839
15	19.9	4.8	0.0	chr16	79717130	79717150	(10621195)	+	(TC)n	Simple_repeat	1	21	(0)	1524043
29	3.2	0.0	0.0	chr16	79717151	79717182	(10621163)	+	(CTCTTG)n	Simple_repeat	1	32	(0)	1524044
498	30.4	5.4	2.5	chr16	79864513	79864711	(10473634)	+	MIRb	SINE/MIR	51	255	(13)	1524298
164	16.8	0.3	0.3	chr16	79876186	79876480	(10461865)	+	(CAGGACC)n	Simple_repeat	1	296	(0)	1524324
522	25.4	18.3	2.6	chr16	79918209	79918551	(10419794)	+	LTR50	LTR/ERVL	387	795	(0)	1524405
26	8.8	0.0	0.0	chr16	79918660	79918695	(10419650)	+	(CT)n	Simple_repeat	1	36	(0)	1524406
38	0.0	0.0	0.0	chr16	79918696	79918728	(10419617)	+	(CA)n	Simple_repeat	1	33	(0)	1524407
28	0.0	0.0	0.0	chr16	80042599	80042629	(10295716)	+	(TC)n	Simple_repeat	1	31	(0)	1524629
50	0.0	0.0	0.0	chr16	80042630	80042672	(10295673)	+	(CA)n	Simple_repeat	1	43	(0)	1524630
192	27.6	12.1	0.0	chr16	81007744	81007801	(9330544)	C	L2a	LINE/L2	(2)	3424	3359	1526294
2324	9.9	0.0	0.0	chr16	81007825	81008127	(9330218)	+	AluSx1	SINE/Alu	1	303	(9)	1526295
274	28.2	5.8	3.5	chr16	81667574	81667724	(8670621)	C	MIR3	SINE/MIR	(14)	216	66	1527739
37	9.8	0.0	0.0	chr16	81667744	81667799	(8670546)	+	(GAGA)n	Simple_repeat	1	56	(0)	1527740
50	2.2	0.0	0.0	chr16	81667800	81667846	(8670499)	+	(GT)n	Simple_repeat	1	47	(0)	1527741
16	35.5	0.0	0.0	chr16	81695712	81695769	(8642576)	+	(CA)n	Simple_repeat	1	58	(0)	1527790
22	7.4	0.0	0.0	chr16	81695911	81695939	(8642406)	+	(AG)n	Simple_repeat	1	29	(0)	1527791
18	18.3	4.9	4.7	chr16	81696076	81696136	(8642209)	+	GA-rich	Low_complexity	1	64	(0)	1527792
254	29.5	0.0	1.3	chr16	81746341	81746419	(8591926)	+	L1M6	LINE/L1	440	517	(5979)	1527925
46	14.6	1.6	3.2	chr16	83820721	83820840	(6517505)	+	(TC)n	Simple_repeat	1	118	(0)	1531653
345	26.2	3.2	2.4	chr16	83820846	83820970	(6517375)	C	MLT1L	LTR/ERVL-MaLR	(334)	276	151	1531650
1951	21.0	6.5	4.5	chr16	84139154	84139637	(6198708)	+	MLT1D	LTR/ERVL-MaLR	1	494	(11)	1532207
31	16.1	0.0	0.0	chr16	84144038	84144095	(6194250)	+	(CTCCCT)n	Simple_repeat	1	58	(0)	1532217
517	32.7	1.5	1.2	chr16	84144114	84144328	(6194017)	C	MIRb	SINE/MIR	(19)	249	28	1532218
13	0.0	0.0	8.0	chr16	84537589	84537613	(5800732)	+	(AAAC)n	Simple_repeat	1	25	(0)	1533013
118	10.7	1.0	1.6	chr16	84644095	84644286	(5694059)	+	(GAAA)n	Simple_repeat	1	194	(0)	1533282
501	35.5	9.1	1.1	chr16	85025787	85026048	(5312297)	C	L3	LINE/CR1	(1142)	2957	2673	1534047
27	10.8	0.0	0.0	chr16	85048486	85048525	(5289820)	+	(TC)n	Simple_repeat	1	40	(0)	1534086
815	21.9	0.0	0.0	chr16	85048597	85048747	(5289598)	+	AluJr	SINE/Alu	136	286	(26)	1534087
47	29.4	3.5	5.4	chr16	85137839	85137853	(5200492)	+	(CCTTT)n	Simple_repeat	1	144	(154)	1534261
54	31.4	2.3	3.8	chr16	85137854	85138113	(5200232)	+	(CTTT)n	Simple_repeat	1	266	(0)	1534262
47	29.4	3.5	5.4	chr16	85138114	85138126	(5200219)	+	(CCTTT)n	Simple_repeat	145	298	(0)	1534261
658	28.3	11.6	0.2	chr16	85157829	85158242	(5180103)	C	LTR33A	LTR/ERVL	(21)	499	33	1534298
464	30.4	9.7	3.3	chr16	85158249	85158585	(5179760)	C	L2a	LINE/L2	(260)	3115	2745	1534297
65	27.8	2.6	0.5	chr16	85248348	85248541	(5089804)	+	(CT)n	Simple_repeat	1	199	(0)	1534487
61	3.4	0.0	0.0	chr16	85294611	85294671	(5043674)	+	(CT)n	Simple_repeat	1	61	(0)	1534571
269	34.1	0.0	0.0	chr16	85294719	85294803	(5043542)	C	MLT1A	LTR/ERVL-MaLR	(286)	269	185	1534572
262	33.0	1.8	3.5	chr16	85327731	85327843	(5010502)	C	MIR3	SINE/MIR	(13)	195	85	1534644
219	20.0	0.0	0.0	chr16	85328079	85328118	(5010227)	+	L2b	LINE/L2	3322	3361	(14)	1534645
361	31.9	4.1	5.0	chr16	85353939	85354269	(4984076)	+	L2c	LINE/L2	2986	3310	(77)	1534699
394	24.4	1.1	0.0	chr16	85354338	85354427	(4983918)	+	MIR	SINE/MIR	158	248	(14)	1534700
146	38.6	1.1	2.3	chr16	85382708	85383522	(4954823)	+	(CA)n	Simple_repeat	1	824	(0)	1534748
55	0.0	0.0	0.0	chr16	85383528	85383574	(4954771)	+	(TC)n	Simple_repeat	1	47	(0)	1534749
13	9.8	0.0	0.0	chr16	85383579	85383600	(4954745)	+	(CTC)n	Simple_repeat	1	22	(0)	1534750
338	31.8	2.7	7.2	chr16	85527773	85527965	(4810380)	C	L2c	LINE/L2	(159)	3228	3045	1535008
467	32.5	5.8	5.8	chr16	85528114	85528312	(4810033)	C	L2a	LINE/L2	(45)	3381	3188	1535009
18	8.8	2.5	4.9	chr16	85555105	85555144	(4783201)	+	(GCC)n	Simple_repeat	1	41	(0)	1535054
17	30.0	0.0	5.6	chr16	86576147	86576211	(3762134)	+	(TTTGTTT)n	Simple_repeat	1	85	(0)	1536869
1823	16.9	11.4	5.0	chr16	86990387	86990785	(3347560)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1537607
53	8.8	0.0	0.0	chr16	86999387	86999458	(3338887)	+	(TC)n	Simple_repeat	1	72	(0)	1537622
14	24.0	4.0	0.0	chr16	86999472	86999521	(3338824)	+	(TTCTCCC)n	Simple_repeat	1	52	(0)	1537623
229	25.7	1.7	0.0	chr16	87178412	87178987	(3159358)	+	(CT)n	Simple_repeat	1	586	(0)	1537955
402	27.3	3.8	0.8	chr16	87244904	87245032	(3093313)	C	MIR3	SINE/MIR	(15)	193	61	1538076
17	5.0	0.0	0.0	chr16	87245218	87245238	(3093107)	+	(CT)n	Simple_repeat	1	21	(0)	1538077
24	6.7	0.0	0.0	chr16	87245240	87245271	(3093074)	+	(GT)n	Simple_repeat	1	32	(0)	1538078
501	22.6	9.9	0.0	chr16	87637195	87637349	(2700996)	C	L1MB5	LINE/L1	(19)	6155	5984	1538828
18	0.0	0.0	0.0	chr16	87637392	87637411	(2700934)	+	(GA)n	Simple_repeat	1	20	(0)	1538829
32	3.2	0.0	0.0	chr16	87637412	87637443	(2700902)	+	(GT)n	Simple_repeat	1	32	(0)	1538830
13	7.8	3.5	3.3	chr16	87807261	87807289	(2531056)	+	(GGAG)n	Simple_repeat	1	30	(0)	1539109
1877	12.2	0.0	1.7	chr16	87945970	87946265	(2392080)	+	AluSx1	SINE/Alu	2	292	(20)	1539380
233	28.7	6.0	10.1	chr16	87946266	87946322	(2392023)	+	MLT1K	LTR/ERVL-MaLR	380	434	(161)	1539379
17	4.3	4.2	0.0	chr16	87946535	87946558	(2391787)	+	(CT)n	Simple_repeat	1	25	(0)	1539381
44	27.4	1.8	4.0	chr16	88492082	88492252	(1846093)	+	(CCCT)n	Simple_repeat	1	174	(0)	1540027
11	25.1	4.0	1.9	chr16	88500517	88500566	(1837779)	+	(GCTGTC)n	Simple_repeat	1	52	(0)	1540034
14	33.8	2.4	1.2	chr16	88500544	88500626	(1837719)	+	(TTGCTG)n	Simple_repeat	1	85	(0)	1540035
30	28.5	3.7	0.9	chr16	89035166	89035272	(1303073)	+	(CT)n	Simple_repeat	1	111	(0)	1540733
365	28.8	3.8	9.8	chr16	89241276	89241529	(1096816)	C	LTR55	LTR/ERVL?	(181)	367	130	1540967
2182	7.1	0.0	1.7	chr16	89353058	89353351	(984994)	+	AluSg7	SINE/Alu	1	289	(20)	1541126
24	6.2	0.0	2.7	chr16	89353352	89353376	(984969)	+	(AG)n	Simple_repeat	1	25	(0)	1541127
2151	9.5	0.0	0.7	chr16	89353482	89353776	(984569)	C	AluSx	SINE/Alu	(16)	296	4	1541128
6393	10.2	3.8	1.1	chr16	89640740	89641667	(696678)	C	LTR13_	LTR/ERVK	(0)	954	1	1541593
15	22.5	0.0	2.3	chr16	89720846	89720888	(617457)	+	(CGG)n	Simple_repeat	1	43	(0)	1541725
3476	5.9	0.8	0.4	chr16	89937870	89938359	(399986)	C	LTR13	LTR/ERVK	(0)	1007	516	1542116
1481	18.6	5.8	2.7	chr17	237866	238166	(83019275)	+	AluJb	SINE/Alu	1	311	(1)	1544846
305	32.7	5.2	4.7	chr17	238167	238360	(83019081)	+	L1MEd	LINE/L1	1004	1200	(5886)	1544845
2376	9.8	0.3	0.0	chr17	1321518	1321822	(81935619)	+	AluSx1	SINE/Alu	1	306	(6)	1546844
280	20.6	5.5	0.0	chr17	1321850	1321917	(81935524)	C	MER5A	DNA/hAT-Charlie	(1)	188	117	1546845
49	0.0	0.0	0.0	chr17	2730522	2730563	(80526878)	+	(TG)n	Simple_repeat	1	42	(0)	1549799
21	0.0	0.0	0.0	chr17	2730564	2730586	(80526855)	+	(AG)n	Simple_repeat	1	23	(0)	1549800
3800	9.6	3.8	0.8	chr17	4002318	4002679	(79254762)	C	MER41A	LTR/ERV1	(186)	368	2	1552174
2459	6.0	0.7	0.7	chr17	4143245	4143544	(79113897)	+	AluSq	SINE/Alu	1	300	(13)	1552423
15	28.6	3.2	0.0	chr17	4143605	4143668	(79113773)	+	(GAGCGA)n	Simple_repeat	1	66	(0)	1552424
12	16.1	0.0	3.3	chr17	4939771	4939800	(78317641)	+	(CCCTT)n	Simple_repeat	1	30	(0)	1554104
232	3.6	0.0	0.0	chr17	5249801	5249828	(78007613)	+	L1MB3	LINE/L1	5446	5473	(698)	1554732
22	3.9	0.0	0.0	chr17	5249830	5249856	(78007585)	+	(AC)n	Simple_repeat	1	27	(0)	1554733
47	6.6	1.6	0.0	chr17	5249856	5249919	(78007522)	+	(AG)n	Simple_repeat	1	65	(0)	1554734
2439	15.4	1.9	4.7	chr17	5249925	5250192	(78007249)	+	L1MB3	LINE/L1	5527	5789	(394)	1554732
449	35.0	2.3	5.9	chr17	5632972	5633138	(77624303)	C	MIRb	SINE/MIR	(8)	260	100	1555497
40	6.7	0.0	0.0	chr17	5633139	5633186	(77624255)	+	(TG)n	Simple_repeat	1	48	(0)	1555498
449	35.0	2.3	5.9	chr17	5633187	5633288	(77624153)	C	MIRb	SINE/MIR	(169)	99	1	1555497
1286	19.1	0.0	1.8	chr17	5713819	5714043	(77543398)	C	AluJr	SINE/Alu	(5)	307	87	1555666
65	0.0	0.0	0.0	chr17	5714048	5714102	(77543339)	+	(TC)n	Simple_repeat	1	55	(0)	1555667
406	24.5	15.9	0.0	chr17	5714103	5714208	(77543233)	C	MIR	SINE/MIR	(123)	139	14	1555665
22	12.0	0.0	2.6	chr17	5714250	5714287	(77543154)	+	(AC)n	Simple_repeat	1	38	(0)	1555668
10995	5.4	4.6	10.1	chr17	5771062	5772733	(77484708)	+	LTR12C	LTR/ERV1	3	1579	(0)	1555784
208	30.0	0.0	10.1	chr17	5772734	5772767	(77484674)	+	MIR3	SINE/MIR	91	120	(88)	1555783
127	17.9	0.4	0.0	chr17	6452944	6453177	(76804264)	+	(CTCT)n	Simple_repeat	1	235	(0)	1557121
195	38.9	0.0	0.0	chr17	6465408	6465479	(76791962)	+	L2b	LINE/L2	2532	2603	(816)	1557144
351	28.4	1.5	6.8	chr17	6465499	6465717	(76791724)	C	L1MC5	LINE/L1	(12)	9292	9155	1557145
31	7.5	0.0	0.0	chr17	6481783	6481825	(76775616)	+	(ATGG)n	Simple_repeat	1	43	(0)	1557168
55	0.0	0.0	0.0	chr17	6481854	6481900	(76775541)	+	(AG)n	Simple_repeat	1	47	(0)	1557169
3065	18.5	11.2	4.8	chr17	6481901	6481985	(76775456)	+	MER21A	LTR/ERVL	13	133	(798)	1557170
104	3.0	0.0	0.0	chr17	6481986	6482087	(76775354)	+	(CT)n	Simple_repeat	1	102	(0)	1557171
3065	18.5	11.2	4.8	chr17	6482088	6482840	(76774601)	+	MER21A	LTR/ERVL	134	911	(20)	1557170
1927	16.2	0.0	2.2	chr17	6544243	6544557	(76712884)	+	AluJo	SINE/Alu	1	308	(4)	1557294
35	0.0	0.0	0.0	chr17	6544626	6544655	(76712786)	+	(TC)n	Simple_repeat	1	30	(0)	1557295
31	9.8	0.0	0.0	chr17	6544656	6544699	(76712742)	+	(AC)n	Simple_repeat	1	44	(0)	1557296
36	5.2	0.0	0.0	chr17	6544848	6544887	(76712554)	+	(CA)n	Simple_repeat	1	40	(0)	1557297
1851	14.2	0.3	4.8	chr17	6659421	6659729	(76597712)	+	AluJb	SINE/Alu	1	295	(17)	1557473
560	33.3	6.2	2.8	chr17	6659730	6659795	(76597646)	+	MIRb	SINE/MIR	193	260	(8)	1557472
59	0.0	1.9	0.0	chr17	6659796	6659849	(76597592)	+	(TC)n	Simple_repeat	1	55	(0)	1557474
18	8.1	0.0	3.6	chr17	6922706	6922733	(76334708)	+	(CT)n	Simple_repeat	1	28	(0)	1557907
1520	11.2	3.2	1.9	chr17	6941231	6941577	(76315864)	+	LTR46	LTR/ERV1	1	404	(56)	1557934
50	2.2	0.0	0.0	chr17	6941582	6941628	(76315813)	+	(TC)n	Simple_repeat	1	47	(0)	1557935
2425	8.8	0.3	0.0	chr17	6941629	6941934	(76315507)	C	AluSp	SINE/Alu	(6)	307	1	1557936
39	8.8	5.3	1.3	chr17	7156617	7156691	(76100750)	+	GA-rich	Low_complexity	1	79	(0)	1558347
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
19	23.1	5.2	3.7	chr17	8210229	8210305	(75047136)	+	GA-rich	Low_complexity	1	81	(0)	1560323
654	1.4	0.0	0.0	chr17	8226991	8227064	(75030377)	C	tRNA-Ile-ATT	tRNA	(3)	74	1	1560367
18	10.8	3.3	0.0	chr17	8827695	8827724	(74429717)	+	(GT)n	Simple_repeat	1	31	(0)	1561545
84	0.0	1.3	0.0	chr17	8827743	8827817	(74429624)	+	(GA)n	Simple_repeat	1	76	(0)	1561546
30	0.0	0.0	0.0	chr17	9529248	9529273	(73728168)	+	(AG)n	Simple_repeat	1	26	(0)	1562883
16	38.9	0.9	2.7	chr17	9529302	9529410	(73728031)	+	(TATA)n	Simple_repeat	1	110	(0)	1562884
29	8.5	3.7	3.6	chr17	13478720	13478773	(69778668)	+	GA-rich	Low_complexity	1	56	(0)	1569845
1107	9.9	0.7	0.0	chr17	15444573	15444713	(67812728)	+	AluSz6	SINE/Alu	3	144	(168)	1573057
37	0.0	0.0	0.0	chr17	15444715	15444746	(67812695)	+	(AG)n	Simple_repeat	1	32	(0)	1573058
506	20.8	4.4	4.7	chr17	15493450	15493604	(67763837)	+	MLT1A0	LTR/ERVL-MaLR	63	236	(160)	1573145
79	21.0	1.1	2.1	chr17	15493606	15493791	(67763650)	+	(CTCC)n	Simple_repeat	1	188	(0)	1573146
345	31.6	14.9	0.6	chr17	16438620	16438801	(66818640)	C	MIRc	SINE/MIR	(7)	261	56	1574991
21	31.9	1.5	0.0	chr17	17783970	17784035	(65473406)	+	(CT)n	Simple_repeat	1	67	(0)	1577348
210	32.3	0.0	2.9	chr17	17784059	17784160	(65473281)	C	UCON71_Crp	Unknown	(0)	277	179	1577349
1875	12.4	4.8	0.7	chr17	17833701	17833982	(65423459)	+	AluSx	SINE/Alu	1	294	(18)	1577437
19	0.0	4.2	0.0	chr17	17834028	17834051	(65423390)	+	(AG)n	Simple_repeat	1	25	(0)	1577438
293	26.7	4.8	1.6	chr17	17834069	17834103	(65423338)	+	L1ME4a	LINE/L1	5999	6033	(91)	1577439
1781	16.4	1.7	0.3	chr17	17834104	17834389	(65423052)	C	AluJr	SINE/Alu	(22)	290	1	1577440
2371	15.6	5.4	5.8	chr17	18176154	18176521	(65080920)	C	MSTB	LTR/ERVL-MaLR	(0)	426	51	1578090
26	10.1	0.0	0.0	chr17	18176522	18176564	(65080877)	+	(T)n	Simple_repeat	1	43	(0)	1578091
1880	11.6	4.3	0.4	chr17	18176568	18176834	(65080607)	C	AluSz	SINE/Alu	(33)	279	2	1578092
1979	1.4	0.0	0.0	chr17	19112420	19112636	(64144805)	C	U3	snRNA	(0)	217	1	1579881
35	34.1	2.8	4.7	chr17	21042336	21042586	(62214855)	+	G-rich	Low_complexity	1	258	(0)	1583514
15	30.1	5.8	2.8	chr17	21042490	21042592	(62214849)	+	GA-rich	Low_complexity	1	109	(0)	1583515
1428	20.4	5.8	16.0	chr17	21494035	21494478	(61762963)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1584344
1280	17.9	11.4	1.1	chr17	22305413	22305695	(60951746)	+	SST1	Satellite/centr	1238	1553	(10)	1585241
23	14.7	4.4	0.0	chr17	22305740	22305784	(60951657)	+	(TC)n	Simple_repeat	1	47	(0)	1585242
16	16.9	0.0	0.0	chr17	22305784	22305816	(60951625)	+	(TGTG)n	Simple_repeat	1	33	(0)	1585243
1262	19.7	12.9	15.7	chr17	22471035	22471264	(60786177)	+	MSTD	LTR/ERVL-MaLR	1	204	(192)	1585549
37	2.5	2.5	0.0	chr17	22471265	22471304	(60786137)	+	(CT)n	Simple_repeat	1	41	(0)	1585550
1262	19.7	12.9	15.7	chr17	22471305	22471482	(60785959)	+	MSTD	LTR/ERVL-MaLR	205	396	(0)	1585549
679	21.8	6.2	2.4	chr17	27345200	27345337	(55912104)	+	L2	LINE/L2	2744	2890	(529)	1586577
4052	14.5	0.8	2.3	chr17	27345338	27345964	(55911477)	C	LTR9D	LTR/ERV1	(0)	645	26	1586578
2115	12.9	13.1	1.3	chr17	27368114	27368490	(55888951)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1586642
837	30.7	10.0	3.1	chr17	27368491	27368713	(55888728)	+	L2c	LINE/L2	3128	3386	(1)	1586641
281	29.5	21.0	0.0	chr17	27570306	27570444	(55686997)	+	MIR	SINE/MIR	81	256	(6)	1587061
951	28.5	16.7	4.1	chr17	28475381	28476242	(54781199)	+	L2a	LINE/L2	1689	2681	(738)	1588776
52	4.8	1.5	1.5	chr17	28523767	28523832	(54733609)	+	(TC)n	Simple_repeat	1	67	(0)	1588849
40	0.0	0.0	0.0	chr17	28540746	28540779	(54716662)	+	(TG)n	Simple_repeat	1	34	(0)	1588875
29	0.0	0.0	0.0	chr17	28540780	28540811	(54716630)	+	(AG)n	Simple_repeat	1	32	(0)	1588876
16	20.6	0.0	2.4	chr17	28662211	28662251	(54595190)	+	(GCG)n	Simple_repeat	1	41	(0)	1589101
26	19.0	2.3	5.6	chr17	28710974	28711060	(54546381)	+	G-rich	Low_complexity	1	89	(0)	1589185
1912	9.7	5.7	0.7	chr17	28719056	28719324	(54538117)	C	AluJb	SINE/Alu	(29)	283	1	1589194
206	23.2	6.7	0.0	chr17	28719340	28719395	(54538046)	+	MIR3	SINE/MIR	67	126	(82)	1589195
17	25.1	0.0	4.8	chr17	28897639	28897700	(54359741)	+	(CGCC)n	Simple_repeat	1	62	(0)	1589579
18	10.5	0.0	0.0	chr17	29294512	29294543	(53962898)	+	(TGTTT)n	Simple_repeat	1	32	(0)	1590289
217	29.7	0.0	12.9	chr17	30171869	30171934	(53085507)	C	MIR3	SINE/MIR	(8)	200	139	1592089
46	0.0	0.0	0.0	chr17	30171935	30171973	(53085468)	+	(CA)n	Simple_repeat	1	39	(0)	1592090
46	0.0	0.0	0.0	chr17	30171977	30172015	(53085426)	+	(CT)n	Simple_repeat	1	39	(0)	1592091
217	29.7	0.0	12.9	chr17	30172016	30172060	(53085381)	C	MIR3	SINE/MIR	(70)	138	100	1592089
33	12.7	0.0	0.0	chr17	30711029	30711088	(52546353)	+	(CT)n	Simple_repeat	1	60	(0)	1593101
2328	10.6	0.0	0.0	chr17	31062731	31063031	(52194410)	+	AluSx	SINE/Alu	1	301	(11)	1593924
54	2.0	0.0	0.0	chr17	31063152	31063202	(52194239)	+	(TC)n	Simple_repeat	1	51	(0)	1593925
333	17.1	0.0	0.0	chr17	31063219	31063285	(52194156)	C	L1MA9	LINE/L1	(166)	6125	6059	1593926
273	20.0	5.8	4.4	chr17	31063383	31063450	(52193991)	+	MLT1N2	LTR/ERVL-MaLR	474	542	(0)	1593923
470	26.5	0.8	0.8	chr17	31063542	31063674	(52193767)	+	MIRb	SINE/MIR	27	159	(109)	1593927
67	0.0	0.0	0.0	chr17	32062906	32062962	(51194479)	+	(GA)n	Simple_repeat	1	57	(0)	1595960
264	34.4	15.6	2.1	chr17	32794506	32795192	(50462249)	C	L2a	LINE/L2	(1)	3425	2407	1597417
22	19.1	5.6	2.6	chr17	32897286	32897357	(50360084)	+	(CTCTCT)n	Simple_repeat	1	76	(0)	1597604
43	0.0	0.0	0.0	chr17	32897359	32897395	(50360046)	+	(AC)n	Simple_repeat	1	37	(0)	1597605
3399	10.3	15.6	0.6	chr17	32917098	32917635	(50339806)	+	MER51A	LTR/ERV1	1	634	(0)	1597634
18030	12.2	5.0	1.8	chr17	32917636	32917711	(50339730)	+	MER51-int	LTR/ERV1	1	88	(7728)	1597634
42	4.6	0.0	0.0	chr17	32917712	32917756	(50339685)	+	(TC)n	Simple_repeat	1	45	(0)	1597635
18030	12.2	5.0	1.8	chr17	32917757	32920129	(50337312)	+	MER51-int	LTR/ERV1	89	2513	(5303)	1597634
386	28.2	9.2	7.3	chr17	33908254	33908498	(49348943)	+	MLT1O	LTR/ERVL-MaLR	147	396	(146)	1599543
38	8.3	0.0	0.0	chr17	34383056	34383106	(48874335)	+	(TC)n	Simple_repeat	1	51	(0)	1600278
21	7.6	0.0	0.0	chr17	34613147	34613174	(48644267)	+	(CT)n	Simple_repeat	1	28	(0)	1600741
39	2.7	0.0	0.0	chr17	34613175	34613212	(48644229)	+	(AC)n	Simple_repeat	1	38	(0)	1600742
30	5.7	0.0	2.6	chr17	34693029	34693067	(48564374)	+	(TC)n	Simple_repeat	1	39	(0)	1600885
678	28.9	10.9	3.0	chr17	36628676	36628910	(46628531)	C	MIRb	SINE/MIR	(4)	264	9	1604291
37	6.1	2.0	0.0	chr17	36628921	36628971	(46628470)	+	(GA)n	Simple_repeat	1	52	(0)	1604292
236	33.3	13.7	0.0	chr17	36629024	36629200	(46628241)	+	MamRep4096	DNA/hAT-Tip100	3	207	(219)	1604293
13	0.0	0.0	0.0	chr17	37134177	37134193	(46123248)	+	(CTG)n	Simple_repeat	1	17	(0)	1605276
53	0.0	0.0	0.0	chr17	37716843	37716887	(45540554)	+	(TC)n	Simple_repeat	1	45	(0)	1606391
215	34.1	7.3	3.5	chr17	37716888	37717057	(45540384)	+	MIRb	SINE/MIR	76	252	(16)	1606392
2365	6.2	3.0	0.0	chr17	38296519	38296808	(44960633)	C	AluSx	SINE/Alu	(13)	299	1	1607582
42	16.2	3.6	0.0	chr17	38603164	38603247	(44654194)	+	GA-rich	Low_complexity	1	87	(0)	1608159
59	9.7	2.0	1.0	chr17	38886082	38886183	(44371258)	+	(CT)n	Simple_repeat	1	104	(0)	1608810
24	18.0	0.0	0.0	chr17	38886281	38886330	(44371111)	+	G-rich	Low_complexity	1	50	(0)	1608811
1498	14.0	14.0	5.8	chr17	38991462	38991756	(44265685)	+	MSTA	LTR/ERVL-MaLR	60	398	(30)	1609068
181	33.0	5.1	7.4	chr17	39199668	39199788	(44057653)	C	L2a	LINE/L2	(0)	3426	3309	1609533
66	3.1	0.0	0.0	chr17	39315807	39315871	(43941570)	+	(GA)n	Simple_repeat	1	65	(0)	1609776
749	24.2	2.5	0.0	chr17	39315945	39316097	(43941344)	+	AluJr4	SINE/Alu	140	296	(16)	1609777
17	24.6	2.3	0.0	chr17	39461509	39461552	(43795889)	+	(GT)n	Simple_repeat	1	45	(0)	1610148
1606	17.1	7.4	1.7	chr17	39481316	39481608	(43775833)	C	AluSz6	SINE/Alu	(0)	312	2	1610198
93	1.2	0.0	0.0	chr17	39481634	39481717	(43775724)	+	(CT)n	Simple_repeat	1	84	(0)	1610199
2178	10.7	0.7	0.0	chr17	39481718	39482006	(43775435)	C	AluSx3	SINE/Alu	(7)	304	14	1610200
61	3.4	0.0	0.0	chr17	39532088	39532148	(43725293)	+	(CT)n	Simple_repeat	1	61	(0)	1610325
370	25.5	23.0	2.1	chr17	39622290	39622477	(43634964)	+	MIR	SINE/MIR	13	251	(11)	1610478
13	18.9	2.8	0.0	chr17	39669032	39669067	(43588374)	+	(TTCTT)n	Simple_repeat	1	37	(0)	1610554
24	36.2	0.0	0.0	chr17	40065434	40065527	(43191914)	+	(TC)n	Simple_repeat	1	94	(0)	1611293
16	23.6	0.0	0.0	chr17	40069008	40069042	(43188399)	+	(GT)n	Simple_repeat	1	35	(0)	1611299
96	24.6	2.0	0.0	chr17	40069072	40069316	(43188125)	+	(CTCT)n	Simple_repeat	1	250	(0)	1611300
14	12.4	5.7	0.0	chr17	40072900	40072934	(43184507)	+	(CCCCAGT)n	Simple_repeat	1	37	(0)	1611302
181	14.7	0.0	2.9	chr17	40124253	40124287	(43133154)	+	X9_LINE	LINE/L1	36	69	(867)	1611396
51	19.4	2.6	0.8	chr17	40124316	40124432	(43133009)	+	(TCTC)n	Simple_repeat	1	120	(0)	1611397
29	0.0	0.0	0.0	chr17	40444859	40444883	(42812558)	+	(AG)n	Simple_repeat	1	25	(0)	1612061
38	0.0	0.0	0.0	chr17	40444885	40444926	(42812515)	+	(AC)n	Simple_repeat	1	42	(0)	1612062
64	1.7	0.0	0.0	chr17	40444927	40444985	(42812456)	+	(AG)n	Simple_repeat	1	59	(0)	1612063
14	31.8	2.6	2.5	chr17	40445022	40445099	(42812342)	+	(CTTT)n	Simple_repeat	1	80	(0)	1612064
20	30.4	0.0	4.0	chr17	40557052	40557126	(42700315)	+	(CT)n	Simple_repeat	1	75	(0)	1612302
282	30.2	1.9	2.8	chr17	41511089	41511197	(41746244)	C	MIR3	SINE/MIR	(32)	176	69	1613733
416	35.9	2.3	0.6	chr17	41521636	41521806	(41735635)	+	MIRb	SINE/MIR	6	179	(89)	1613748
2342	7.4	1.7	0.0	chr17	41528711	41529006	(41728435)	C	AluSz	SINE/Alu	(11)	301	1	1613756
573	21.1	14.0	0.0	chr17	41530614	41530779	(41726662)	C	MIRc	SINE/MIR	(35)	233	41	1613759
857	19.9	8.6	0.0	chr17	41678325	41678495	(41578946)	+	LTR27D	LTR/ERV1	287	473	(142)	1614027
710	16.9	6.8	3.8	chr17	41678503	41678687	(41578754)	+	MER31B	LTR/ERV1	274	464	(2)	1614028
1967	11.0	3.6	0.0	chr17	41691803	41692094	(41565347)	C	AluSq	SINE/Alu	(9)	304	2	1614056
30	7.9	0.0	0.0	chr17	42311089	42311128	(40946313)	+	(AG)n	Simple_repeat	1	40	(0)	1615351
187	33.1	6.1	6.7	chr17	42773138	42773257	(40484184)	+	MIR1_Amn	SINE/MIR	6	118	(90)	1616344
19	28.9	5.4	0.0	chr17	42833431	42833522	(40423919)	+	(GCGA)n	Simple_repeat	1	97	(0)	1616449
384	4.2	0.0	0.0	chr17	43165887	43165934	(40091507)	+	L1PA3	LINE/L1	6103	6150	(5)	1617229
41588	5.9	1.9	0.9	chr17	43165935	43166045	(40091396)	C	Harlequin-int	LTR/ERV1	(5222)	1674	1570	1617228
7264	8.2	2.0	11.1	chr17	43166029	43167245	(40090196)	C	Harlequin-int	LTR/ERV1	(5792)	1104	1	1617228
21	8.3	7.9	0.0	chr17	43367817	43367854	(39889587)	+	(AC)n	Simple_repeat	1	41	(0)	1617634
680	25.3	1.7	0.6	chr17	43367908	43368082	(39889359)	C	U2	snRNA	(6)	182	6	1617635
951	16.6	5.1	0.6	chr17	43383393	43383543	(39873898)	+	AluJb	SINE/Alu	136	295	(17)	1617673
58	5.0	0.0	0.0	chr17	43383544	43383606	(39873835)	+	(AG)n	Simple_repeat	1	63	(0)	1617674
951	16.6	5.1	0.6	chr17	43383607	43383623	(39873818)	+	AluJb	SINE/Alu	296	312	(0)	1617673
23	14.0	0.0	0.0	chr17	43383624	43383664	(39873777)	+	(AGAGAA)n	Simple_repeat	1	41	(0)	1617675
274	18.9	13.8	7.0	chr17	43403795	43403908	(39853533)	C	MIR3	SINE/MIR	(71)	137	15	1617721
12	4.0	7.1	3.3	chr17	43403970	43403997	(39853444)	+	(TCCC)n	Simple_repeat	1	30	(0)	1617722
390	32.5	9.0	2.9	chr17	43633192	43633400	(39624041)	C	MIRc	SINE/MIR	(20)	248	26	1618287
25	3.4	0.0	0.0	chr17	43633458	43633487	(39623954)	+	(GT)n	Simple_repeat	1	30	(0)	1618288
33	0.0	0.0	0.0	chr17	43633488	43633515	(39623926)	+	(GA)n	Simple_repeat	1	28	(0)	1618289
184	30.9	5.5	0.0	chr17	43633544	43633611	(39623830)	C	MIRb	SINE/MIR	(13)	255	184	1618290
239	26.1	6.4	4.3	chr17	43633607	43633698	(39623743)	+	L2c	LINE/L2	3294	3387	(0)	1618291
246	21.1	0.0	0.0	chr17	43784964	43785015	(39472426)	C	MLT2B3	LTR/ERVL	(0)	554	503	1618597
43	8.8	0.0	0.0	chr17	43785016	43785075	(39472366)	+	(AG)n	Simple_repeat	1	60	(0)	1618598
2019	17.1	1.6	6.4	chr17	43785076	43785166	(39472275)	C	Ricksha_c	DNA/MULE-MuDR	(1203)	845	764	1618599
2224	16.4	7.9	6.5	chr17	43785167	43785424	(39472017)	C	MER66B	LTR/ERV1	(4)	482	206	1618600
226	30.3	1.3	0.0	chr17	44146832	44146907	(39110534)	C	UCON29	DNA/PiggyBac?	(329)	110	34	1619334
21	0.0	0.0	3.7	chr17	44147023	44147049	(39110392)	+	(TG)n	Simple_repeat	1	27	(0)	1619335
18	4.5	0.0	0.0	chr17	44147049	44147071	(39110370)	+	(GA)n	Simple_repeat	1	23	(0)	1619336
18	31.7	0.0	6.7	chr17	44213905	44214023	(39043418)	+	(CCCT)n	Simple_repeat	1	119	(0)	1619452
590	26.8	10.7	3.9	chr17	44426677	44426848	(38830593)	+	L1M7	LINE/L1	1365	1548	(4763)	1619892
42	4.6	0.0	0.0	chr17	44426849	44426893	(38830548)	+	(CT)n	Simple_repeat	1	45	(0)	1619893
590	26.8	10.7	3.9	chr17	44426894	44426980	(38830461)	+	L1M7	LINE/L1	1549	1644	(4667)	1619892
20	37.1	0.0	0.0	chr17	44426985	44427059	(38830382)	+	(AT)n	Simple_repeat	1	75	(0)	1619894
2298	10.4	0.7	0.0	chr17	44746542	44746840	(38510601)	+	AluSx1	SINE/Alu	6	306	(6)	1620644
43	2.3	0.0	2.2	chr17	45003532	45003577	(38253864)	+	(CT)n	Simple_repeat	1	46	(0)	1621149
330	28.3	10.3	4.0	chr17	45052314	45052486	(38204955)	C	MIRb	SINE/MIR	(21)	247	63	1621260
28	3.1	0.0	0.0	chr17	45791820	45791852	(37465589)	+	(TC)n	Simple_repeat	1	33	(0)	1622797
38	0.0	0.0	0.0	chr17	45791853	45791885	(37465556)	+	(CA)n	Simple_repeat	1	33	(0)	1622798
619	20.7	8.3	9.2	chr17	45854294	45854511	(37402930)	+	MLT1D	LTR/ERVL-MaLR	1	216	(289)	1622911
2087	14.4	0.3	0.3	chr17	45854513	45854818	(37402623)	+	AluSz	SINE/Alu	2	307	(5)	1622912
1440	24.2	9.8	0.0	chr17	45950993	45951377	(37306064)	+	L1MB5	LINE/L1	5746	6172	(2)	1623103
18	0.0	0.0	4.3	chr17	45951519	45951541	(37305900)	+	(TC)n	Simple_repeat	1	23	(0)	1623104
345	32.9	3.2	11.5	chr17	46078279	46078631	(37178810)	C	L1MEf	LINE/L1	(5652)	590	274	1623333
1872	17.4	1.3	0.7	chr17	46147293	46147596	(37109845)	+	AluJb	SINE/Alu	1	306	(6)	1623459
20	14.6	0.0	0.0	chr17	46147597	46147634	(37109807)	+	(GAGA)n	Simple_repeat	1	38	(0)	1623460
22	17.2	1.9	1.8	chr17	46192762	46192817	(37064624)	+	(GAGCAG)n	Simple_repeat	1	56	(0)	1623544
13	20.8	10.6	0.0	chr17	46192891	46192956	(37064485)	+	G-rich	Low_complexity	1	73	(0)	1623545
17	12.4	2.7	2.6	chr17	46193329	46193365	(37064076)	+	(CGG)n	Simple_repeat	1	38	(0)	1623547
15	8.7	0.0	0.0	chr17	46193431	46193455	(37063986)	+	(GAGC)n	Simple_repeat	1	25	(0)	1623548
1258	17.6	13.7	0.0	chr17	47287912	47288182	(35969259)	C	AluJo	SINE/Alu	(0)	312	6	1625733
41	2.6	0.0	0.0	chr17	47288207	47288246	(35969195)	+	(AG)n	Simple_repeat	1	40	(0)	1625734
493	27.8	12.8	1.0	chr17	47288257	47288456	(35968985)	+	Plat_L3	LINE/CR1	3160	3386	(200)	1625735
12	31.3	0.0	0.0	chr17	47324096	47324142	(35933299)	+	G-rich	Low_complexity	1	47	(0)	1625797
2030	6.7	8.9	0.0	chr17	47492834	47493100	(35764341)	+	AluSx	SINE/Alu	1	293	(19)	1626105
394	27.1	1.6	0.0	chr17	47649133	47649257	(35608184)	+	MIR3	SINE/MIR	61	182	(26)	1626487
12	8.1	3.6	3.5	chr17	47877881	47877908	(35379533)	+	(CTCC)n	Simple_repeat	1	29	(0)	1626876
51	2.1	0.0	0.0	chr17	48239830	48239877	(35017564)	+	(GA)n	Simple_repeat	1	48	(0)	1627521
24	18.7	2.0	0.0	chr17	48252225	48252273	(35005168)	+	GA-rich	Low_complexity	1	50	(0)	1627537
2209	12.2	3.1	2.4	chr17	48373064	48373441	(34884000)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1627725
1022	21.9	0.4	6.6	chr17	48373442	48373490	(34883951)	C	MIR	SINE/MIR	(216)	46	2	1627722
13	28.3	1.7	3.3	chr17	48546772	48546830	(34710611)	+	GA-rich	Low_complexity	1	60	(0)	1628081
18	4.7	0.0	0.0	chr17	48578628	48578649	(34678792)	+	(AG)n	Simple_repeat	1	22	(0)	1628115
30	18.1	5.2	1.2	chr17	48604820	48604896	(34652545)	+	(TC)n	Simple_repeat	1	81	(0)	1628133
38	23.7	4.2	3.4	chr17	48612615	48612756	(34644685)	+	GA-rich	Low_complexity	1	148	(0)	1628143
101	8.1	2.0	0.7	chr17	48647022	48647169	(34610272)	+	(GA)n	Simple_repeat	1	151	(0)	1628176
63	0.0	0.0	0.0	chr17	48677964	48678017	(34579424)	+	(TC)n	Simple_repeat	1	54	(0)	1628260
94	7.2	4.1	0.0	chr17	48728854	48728999	(34528442)	+	(TC)n	Simple_repeat	1	152	(0)	1628367
4579	9.7	2.2	1.0	chr17	48825536	48825977	(34431464)	C	MER41B	LTR/ERV1	(184)	450	1	1628573
495	29.0	7.1	0.0	chr17	48826001	48826169	(34431272)	+	MIRb	SINE/MIR	20	201	(67)	1628576
17	4.5	0.0	4.0	chr17	49003973	49003997	(34253444)	+	(AG)n	Simple_repeat	1	25	(0)	1629014
12	28.2	1.7	3.3	chr17	49004032	49004090	(34253351)	+	(CGCCC)n	Simple_repeat	1	60	(0)	1629015
1881	12.9	11.0	13.6	chr17	49088140	49088580	(34168861)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1629191
22	11.0	0.0	2.4	chr17	49193541	49193581	(34063860)	+	(GAAA)n	Simple_repeat	1	41	(0)	1629402
42	16.9	6.4	0.7	chr17	49193608	49193719	(34063722)	+	GA-rich	Low_complexity	1	118	(0)	1629403
19	4.0	3.9	0.0	chr17	49515375	49515400	(33742041)	+	(AC)n	Simple_repeat	1	27	(0)	1630080
15	0.0	0.0	0.0	chr17	49515400	49515416	(33742025)	+	(AG)n	Simple_repeat	1	17	(0)	1630081
12	21.5	4.4	2.1	chr17	49515437	49515481	(33741960)	+	(GCAG)n	Simple_repeat	1	47	(0)	1630082
1758	9.5	14.8	0.0	chr17	49646282	49646534	(33610907)	+	AluSz	SINE/Alu	1	297	(15)	1630307
497	30.1	9.4	1.0	chr17	49646661	49646855	(33610586)	C	MIRc	SINE/MIR	(32)	236	24	1630308
16	31.7	4.2	1.0	chr17	49691810	49691904	(33565537)	+	GA-rich	Low_complexity	1	99	(0)	1630405
2540	5.3	0.0	0.7	chr17	49740250	49740548	(33516893)	C	AluY	SINE/Alu	(14)	297	1	1630482
15	16.9	2.4	2.3	chr17	49868846	49868887	(33388554)	+	(CTCTGTC)n	Simple_repeat	1	43	(0)	1630723
75	0.0	2.8	0.0	chr17	49868899	49868969	(33388472)	+	(TC)n	Simple_repeat	1	73	(0)	1630724
1748	14.0	5.4	2.5	chr17	50001992	50002277	(33255164)	+	AluJo	SINE/Alu	2	296	(16)	1630962
16	5.3	0.0	0.0	chr17	50002307	50002326	(33255115)	+	(AG)n	Simple_repeat	1	20	(0)	1630963
342	15.4	3.0	0.0	chr17	50002327	50002391	(33255050)	+	L1MC	LINE/L1	4175	4241	(1905)	1630964
1457	14.7	5.0	2.2	chr17	50002373	50002392	(33255049)	+	L1MC	LINE/L1	4410	4427	(1719)	1630964
1301	17.8	0.0	0.5	chr17	50002393	50002589	(33254852)	+	AluJo	SINE/Alu	1	196	(116)	1630965
244	35.7	4.8	0.0	chr17	50034071	50034168	(33223273)	+	MIR3	SINE/MIR	35	137	(71)	1631038
24	12.6	0.0	0.0	chr17	50034181	50034216	(33223225)	+	(AC)n	Simple_repeat	1	36	(0)	1631039
60	0.0	0.0	0.0	chr17	50034281	50034331	(33223110)	+	(AG)n	Simple_repeat	1	51	(0)	1631040
24	10.8	2.4	2.3	chr17	50034413	50034454	(33222987)	+	GA-rich	Low_complexity	1	43	(0)	1631041
30	8.3	0.0	0.0	chr17	50129804	50129842	(33127599)	+	(GT)n	Simple_repeat	1	39	(0)	1631212
22	6.2	5.9	0.0	chr17	50129845	50129878	(33127563)	+	(AG)n	Simple_repeat	1	36	(0)	1631213
253	31.3	1.7	7.3	chr17	50589709	50589832	(32667609)	C	MIRc	SINE/MIR	(149)	119	3	1632082
17	0.0	0.0	0.0	chr17	50589895	50589912	(32667529)	+	(TC)n	Simple_repeat	1	18	(0)	1632083
43	0.0	0.0	0.0	chr17	50589913	50589949	(32667492)	+	(TG)n	Simple_repeat	1	37	(0)	1632084
32	5.3	0.0	0.0	chr17	50808952	50808991	(32448450)	+	(GA)n	Simple_repeat	1	40	(0)	1632506
359	18.5	0.0	0.0	chr17	50931876	50931929	(32325512)	+	AluJb	SINE/Alu	214	267	(45)	1632766
57	1.8	1.8	0.0	chr17	50931938	50931994	(32325447)	+	(GA)n	Simple_repeat	1	58	(0)	1632767
2049	26.3	13.4	4.8	chr17	51017314	51017386	(32240055)	+	HAL1	LINE/L1	2298	2369	(138)	1632921
389	24.7	1.1	1.1	chr17	51017402	51017495	(32239946)	+	HAL1	LINE/L1	1675	1768	(739)	1632924
38	2.8	0.0	0.0	chr17	51017520	51017556	(32239885)	+	(GA)n	Simple_repeat	1	37	(0)	1632925
519	28.6	4.1	2.1	chr17	51017561	51017703	(32239738)	+	MIRb	SINE/MIR	55	200	(68)	1632926
427	26.7	22.6	0.5	chr17	51017719	51017921	(32239520)	C	MIR	SINE/MIR	(0)	262	2	1632927
971	21.6	15.0	4.4	chr17	51461578	51462198	(31795243)	+	LTR50	LTR/ERVL	1	795	(0)	1633829
94	27.5	2.8	0.7	chr17	55335565	55335853	(27921588)	+	(TC)n	Simple_repeat	1	297	(0)	1639444
48	12.6	0.0	0.0	chr17	55481041	55481126	(27776315)	+	(TC)n	Simple_repeat	1	86	(0)	1639712
1010	29.6	7.2	2.6	chr17	55481148	55481653	(27775788)	+	Tigger15a	DNA/TcMar-Tigger	94	624	(91)	1639713
72	8.7	0.9	1.7	chr17	55734130	55734243	(27523198)	+	(TC)n	Simple_repeat	1	115	(0)	1640144
186	17.1	0.0	2.8	chr17	55734304	55734339	(27523102)	C	MIRb	SINE/MIR	(38)	230	196	1640145
30	18.6	0.0	0.0	chr17	56914753	56914813	(26342628)	+	(CTCT)n	Simple_repeat	1	61	(0)	1642233
4116	21.2	15.2	9.3	chr17	57062099	57062359	(26195082)	C	Zaphod	DNA/hAT-Tip100	(2938)	1093	926	1642566
2057	12.0	0.3	3.5	chr17	57062360	57062675	(26194766)	C	AluSz	SINE/Alu	(6)	306	1	1642571
861	31.3	8.7	5.2	chr17	57082417	57082949	(26174492)	+	L2a	LINE/L2	2304	2871	(548)	1642621
247	21.6	0.0	0.0	chr17	57082941	57082991	(26174450)	C	L2a	LINE/L2	(0)	3375	3325	1642623
354	24.5	14.9	9.8	chr17	57083010	57083091	(26174350)	C	L2a	LINE/L2	(157)	3269	3181	1642623
44	0.0	0.0	0.0	chr17	57083092	57083129	(26174312)	+	(GT)n	Simple_repeat	1	38	(0)	1642624
354	24.5	14.9	9.8	chr17	57083130	57083151	(26174290)	C	L2a	LINE/L2	(246)	3180	3163	1642623
2072	10.7	2.6	1.0	chr17	57083152	57083451	(26173990)	+	AluSx	SINE/Alu	1	305	(7)	1642625
16	18.6	0.0	2.9	chr17	57257428	57257461	(25999980)	+	(TC)n	Simple_repeat	1	34	(0)	1642981
31	0.0	0.0	0.0	chr17	57541152	57541178	(25716263)	+	(AG)n	Simple_repeat	1	27	(0)	1643446
200	25.7	0.0	5.4	chr17	57699075	57699148	(25558293)	+	L3	LINE/CR1	2036	2105	(1994)	1643663
41	0.0	0.0	0.0	chr17	57699149	57699183	(25558258)	+	(GA)n	Simple_repeat	1	35	(0)	1643666
17	0.0	0.0	0.0	chr17	57699184	57699202	(25558239)	+	(TG)n	Simple_repeat	1	19	(0)	1643667
211	23.7	0.0	8.4	chr17	57699203	57699285	(25558156)	+	L3	LINE/CR1	2036	2111	(1988)	1643663
752	28.1	5.3	3.7	chr17	57699340	57699690	(25557751)	C	L3	LINE/CR1	(2000)	2099	1743	1643668
22	9.7	2.9	0.0	chr17	57736757	57736790	(25520651)	+	(AG)n	Simple_repeat	1	35	(0)	1643743
23	6.1	5.7	0.0	chr17	57767281	57767323	(25490118)	+	(CT)n	Simple_repeat	1	45	(0)	1643809
51	0.0	0.0	0.0	chr17	57767324	57767367	(25490074)	+	(GT)n	Simple_repeat	1	44	(0)	1643810
20	14.2	5.2	3.3	chr17	57767368	57767381	(25490060)	+	(TCTTTC)n	Simple_repeat	3	17	(0)	1643811
49	0.0	0.0	0.0	chr17	57905250	57905291	(25352150)	+	(AC)n	Simple_repeat	1	42	(0)	1644082
2073	12.8	0.4	0.0	chr17	58188845	58189125	(25068316)	+	AluSx1	SINE/Alu	1	282	(30)	1644616
54	3.8	0.0	0.0	chr17	58189144	58189198	(25068243)	+	(TG)n	Simple_repeat	1	55	(0)	1644617
235	27.8	10.6	8.3	chr17	58245158	58245314	(25012127)	C	LTR78	LTR/ERV1	(220)	1076	916	1644713
15	0.0	0.0	0.0	chr17	58245364	58245380	(25012061)	+	(CT)n	Simple_repeat	1	17	(0)	1644714
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
43	0.0	0.0	0.0	chr17	59162214	59162250	(24095191)	+	(AC)n	Simple_repeat	1	37	(0)	1646581
20	4.0	0.0	0.0	chr17	59162251	59162274	(24095167)	+	(AG)n	Simple_repeat	1	24	(0)	1646582
1714	15.9	2.0	4.2	chr17	59550479	59550786	(23706655)	C	AluJr	SINE/Alu	(11)	301	1	1647501
305	24.0	11.3	19.5	chr17	59550787	59550903	(23706538)	C	L1ME1	LINE/L1	(5354)	1749	1649	1647492
61	1.7	1.7	0.0	chr17	59550904	59550963	(23706478)	+	(TC)n	Simple_repeat	1	61	(0)	1647502
305	24.0	11.3	19.5	chr17	59550964	59551047	(23706394)	C	L1ME1	LINE/L1	(5455)	1648	1597	1647492
2382	3.4	0.0	0.4	chr17	59551048	59551315	(23706126)	C	AluY	SINE/Alu	(16)	295	29	1647503
50	0.0	0.0	0.0	chr17	59784101	59784143	(23473298)	+	(GT)n	Simple_repeat	1	43	(0)	1647936
23	17.0	2.1	0.0	chr17	59784144	59784187	(23473254)	+	GA-rich	Low_complexity	4	48	(0)	1647937
517	18.1	0.0	1.2	chr17	59843641	59843723	(23413718)	+	AluJr	SINE/Alu	1	82	(230)	1648070
2192	8.6	3.6	0.3	chr17	59843731	59844022	(23413419)	+	AluSp	SINE/Alu	1	302	(11)	1648071
1433	21.1	3.3	0.0	chr17	59844108	59844372	(23413069)	C	AluJb	SINE/Alu	(37)	275	2	1648073
2275	11.1	1.6	0.0	chr17	59844392	59844697	(23412744)	+	AluSz	SINE/Alu	1	311	(1)	1648074
636	31.1	6.9	1.3	chr17	60304851	60305081	(22952360)	C	MIR	SINE/MIR	(3)	259	15	1648964
2631	14.0	1.4	2.1	chr17	60305107	60305535	(22951906)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1648965
25	22.6	2.8	6.4	chr17	60392137	60392243	(22865198)	+	(CTC)n	Simple_repeat	1	110	(0)	1649144
3422	13.0	7.3	1.4	chr17	60560688	60561264	(22696177)	C	LTR18B	LTR/ERVL	(0)	614	1	1649530
14	18.8	0.0	0.0	chr17	61017788	61017818	(22239623)	+	(TCTC)n	Simple_repeat	1	31	(0)	1650398
2278	8.5	0.0	2.9	chr17	62143829	62144135	(21113306)	+	AluSg	SINE/Alu	1	298	(12)	1652363
4052	10.4	1.9	2.1	chr17	62144136	62144539	(21112902)	+	MER61E	LTR/ERV1	162	569	(0)	1652362
12	18.8	2.6	2.6	chr17	64146158	64146195	(19111246)	+	G-rich	Low_complexity	1	39	(0)	1656000
2284	11.3	0.0	0.7	chr17	64353941	64354241	(18903200)	C	AluSx1	SINE/Alu	(13)	299	1	1656395
390	27.9	6.2	3.4	chr17	64554171	64554410	(18703031)	+	MLT1H	LTR/ERVL-MaLR	1	289	(260)	1656791
340	24.2	0.4	12.3	chr17	64554517	64554742	(18702699)	+	MLT1H	LTR/ERVL-MaLR	367	554	(37)	1656791
1336	13.6	0.6	0.0	chr17	64631021	64631197	(18626244)	+	AluJr	SINE/Alu	1	178	(134)	1656937
28	20.9	1.3	2.6	chr17	64631206	64631281	(18626160)	+	G-rich	Low_complexity	1	77	(0)	1656938
69	3.0	0.0	0.0	chr17	64631282	64631349	(18626092)	+	(GA)n	Simple_repeat	1	68	(0)	1656939
457	19.1	0.0	6.0	chr17	65031763	65031846	(18225595)	+	AluJo	SINE/Alu	137	215	(97)	1657803
60	1.8	0.0	0.0	chr17	65031867	65031922	(18225519)	+	(AG)n	Simple_repeat	1	56	(0)	1657804
32	0.0	0.0	0.0	chr17	65031923	65031957	(18225484)	+	(TG)n	Simple_repeat	1	35	(0)	1657805
23	17.4	4.8	3.1	chr17	65179964	65180025	(18077416)	+	(TC)n	Simple_repeat	1	65	(0)	1658154
43	0.0	0.0	0.0	chr17	65202409	65202445	(18054996)	+	(GT)n	Simple_repeat	1	37	(0)	1658201
32	2.5	2.5	0.0	chr17	65202446	65202485	(18054956)	+	(AG)n	Simple_repeat	1	41	(0)	1658202
920	30.6	8.2	6.2	chr17	65202581	65203365	(18054076)	C	MamGypLTR3a	LTR/Gypsy	(24)	957	156	1658203
15	0.0	0.0	0.0	chr17	65537615	65537633	(17719808)	+	(TGG)n	Simple_repeat	1	19	(0)	1658861
51	22.8	6.7	3.5	chr17	65537927	65538164	(17719277)	+	(CACGCA)n	Simple_repeat	1	254	(0)	1658862
2403	4.8	1.0	0.7	chr17	66303721	66304009	(16953432)	+	AluSx	SINE/Alu	1	290	(22)	1660072
314	31.0	10.2	4.3	chr17	66343517	66343819	(16913622)	C	L2b	LINE/L2	(610)	2809	2487	1660123
1211	21.7	6.2	12.0	chr17	66584526	66584868	(16672573)	C	MLT1C	LTR/ERVL-MaLR	(44)	423	82	1660503
3881	14.4	2.0	2.5	chr17	66584869	66585516	(16671925)	C	LTR9D	LTR/ERV1	(0)	645	1	1660505
2254	11.6	2.6	7.0	chr17	67037610	67038007	(16219434)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	1661281
37	6.4	2.0	0.0	chr17	67697274	67697322	(15560119)	+	(CT)n	Simple_repeat	1	50	(0)	1662570
47	0.0	0.0	0.0	chr17	67816306	67816345	(15441096)	+	(GT)n	Simple_repeat	1	40	(0)	1662872
18	3.8	3.5	3.3	chr17	67816354	67816382	(15441059)	+	(GA)n	Simple_repeat	1	30	(0)	1662873
126	5.9	2.8	0.6	chr17	68352027	68352204	(14905237)	+	(GA)n	Simple_repeat	1	183	(0)	1664036
503	26.0	9.2	9.5	chr17	68352261	68352497	(14904944)	+	L1ME4a	LINE/L1	5798	6044	(80)	1664037
44	0.0	0.0	0.0	chr17	68499369	68499406	(14758035)	+	(AG)n	Simple_repeat	1	38	(0)	1664313
43	0.0	0.0	0.0	chr17	68510160	68510196	(14747245)	+	(AG)n	Simple_repeat	1	37	(0)	1664333
704	21.5	10.9	0.5	chr17	68510231	68510426	(14747015)	+	MIR	SINE/MIR	43	261	(1)	1664334
630	30.1	5.9	2.2	chr17	68989166	68989256	(14268185)	C	MIRb	SINE/MIR	(0)	268	172	1665072
46	0.0	0.0	0.0	chr17	68989257	68989295	(14268146)	+	(CA)n	Simple_repeat	1	39	(0)	1665073
630	30.1	5.9	2.2	chr17	68989296	68989431	(14268010)	C	MIRb	SINE/MIR	(97)	171	33	1665072
17	8.8	0.0	0.0	chr17	69057420	69057443	(14199998)	+	(AG)n	Simple_repeat	1	24	(0)	1665158
252	35.5	8.7	1.6	chr17	69830689	69831006	(13426435)	C	L1ME2	LINE/L1	(5739)	661	319	1666371
73	4.1	0.0	0.0	chr17	69831023	69831098	(13426343)	+	(TC)n	Simple_repeat	1	76	(0)	1666372
29	10.1	1.8	3.5	chr17	69831099	69831155	(13426286)	+	(CCTC)n	Simple_repeat	1	58	(0)	1666373
1544	21.6	9.4	11.9	chr17	72795093	72795674	(10461767)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	4	1671027
20	10.4	0.0	3.0	chr17	72971296	72971306	(10286135)	+	(CT)n	Simple_repeat	1	11	(0)	1671338
31	3.3	0.0	0.0	chr17	72971307	72971337	(10286104)	+	(CA)n	Simple_repeat	1	31	(0)	1671339
20	10.4	0.0	3.0	chr17	72971338	72971358	(10286083)	+	(CT)n	Simple_repeat	2	22	(0)	1671340
497	27.0	1.7	0.0	chr17	73289100	73289214	(9968227)	C	MER58B	DNA/hAT-Charlie	(0)	341	225	1672000
746	25.2	0.0	0.0	chr17	74296194	74296324	(8961117)	+	FLAM_C	SINE/Alu	2	132	(11)	1673875
47	15.2	2.4	0.0	chr17	74296325	74296408	(8961033)	+	GA-rich	Low_complexity	1	86	(0)	1673876
655	14.2	10.2	0.0	chr17	74296412	74296517	(8960924)	C	AluJr	SINE/Alu	(194)	118	1	1673877
2760	20.6	4.0	0.4	chr17	74296518	74297068	(8960373)	C	L1M4	LINE/L1	(6943)	574	3	1673866
29	13.2	0.0	0.0	chr17	74470387	74470436	(8787005)	+	(GAGA)n	Simple_repeat	1	50	(0)	1674213
80	2.6	0.0	0.0	chr17	74612202	74612278	(8645163)	+	(TC)n	Simple_repeat	1	77	(0)	1674459
650	18.0	3.5	0.0	chr17	74612279	74612389	(8645052)	C	FLAM_A	SINE/Alu	(27)	115	1	1674460
749	24.5	3.6	3.1	chr17	74716468	74716661	(8540780)	C	MIRb	SINE/MIR	(24)	244	50	1674697
24	3.6	0.0	0.0	chr17	74716707	74716735	(8540706)	+	(AG)n	Simple_repeat	1	29	(0)	1674698
2346	11.5	0.0	0.3	chr17	74716852	74717164	(8540277)	+	AluSq2	SINE/Alu	1	312	(1)	1674699
666	14.8	10.5	1.8	chr17	74873714	74873878	(8383563)	+	MER96B	DNA/hAT-Tip100	3	183	(234)	1674914
2818	13.1	3.6	0.0	chr17	76601713	76602163	(6655278)	C	MER41B	LTR/ERV1	(166)	468	1	1678372
2326	11.0	0.0	1.0	chr17	76602300	76602608	(6654833)	+	AluSx1	SINE/Alu	1	306	(6)	1678373
31	24.3	5.9	0.0	chr17	76697885	76697988	(6559453)	+	GA-rich	Low_complexity	1	110	(0)	1678562
222	27.4	18.2	4.4	chr17	76700627	76700992	(6556449)	C	L2a	LINE/L2	(18)	3408	2981	1678570
318	22.9	1.4	0.5	chr17	76840743	76841481	(6415960)	+	(CT)n	Simple_repeat	1	749	(0)	1678870
33	5.1	0.0	0.0	chr17	77727634	77727674	(5529767)	+	(TC)n	Simple_repeat	1	41	(0)	1680538
49	0.0	0.0	0.0	chr17	77727675	77727716	(5529725)	+	(CA)n	Simple_repeat	1	42	(0)	1680539
60	32.8	2.7	0.0	chr17	77885687	77885905	(5371536)	+	GA-rich	Low_complexity	1	225	(0)	1680819
40	20.6	0.0	0.0	chr17	78257451	78257526	(4999915)	+	(TG)n	Simple_repeat	1	76	(0)	1681505
12	22.3	0.0	7.4	chr17	78257759	78257812	(4999629)	+	(CTGCCCC)n	Simple_repeat	1	54	(0)	1681506
530	35.2	3.4	6.3	chr17	78257893	78258353	(4999088)	+	L2b	LINE/L2	2927	3373	(2)	1681507
3513	11.8	7.8	0.9	chr17	78272043	78272566	(4984875)	C	LTR6A	LTR/ERV1	(1)	563	1	1681538
33	6.4	4.1	0.0	chr17	78736390	78736438	(4521003)	+	(TC)n	Simple_repeat	1	51	(0)	1682346
23	3.7	0.0	0.0	chr17	78736440	78736467	(4520974)	+	(AC)n	Simple_repeat	1	28	(0)	1682347
58	4.0	5.2	0.0	chr17	79696418	79696494	(3560947)	+	(CT)n	Simple_repeat	1	81	(0)	1683775
4411	10.9	12.3	1.7	chr17	79696529	79697275	(3560166)	+	LTR1A2	LTR/ERV1	1	837	(0)	1683776
36	8.7	0.0	0.0	chr17	79806053	79806101	(3451340)	+	(TG)n	Simple_repeat	1	49	(0)	1683959
57	3.5	0.0	0.0	chr17	79806102	79806159	(3451282)	+	(GA)n	Simple_repeat	1	58	(0)	1683960
1246	28.8	8.0	3.9	chr17	79822159	79822269	(3435172)	C	L1MC4	LINE/L1	(23)	8019	7911	1683982
59	1.8	0.0	0.0	chr17	79822270	79822324	(3435117)	+	(TG)n	Simple_repeat	1	55	(0)	1683983
2099	8.3	4.8	0.4	chr17	79822325	79822601	(3434840)	C	AluSq	SINE/Alu	(23)	290	1	1683984
23	0.0	0.0	0.0	chr17	79828500	79828524	(3428917)	+	(TC)n	Simple_repeat	1	25	(0)	1683996
47	0.0	0.0	0.0	chr17	79828525	79828564	(3428877)	+	(CA)n	Simple_repeat	1	40	(0)	1683997
649	28.6	10.9	0.9	chr17	79828907	79829121	(3428320)	+	MIR	SINE/MIR	23	261	(1)	1683998
12	21.0	2.5	2.4	chr17	79831917	79831956	(3425485)	+	(TCCCC)n	Simple_repeat	1	41	(0)	1684002
32	28.6	0.8	3.2	chr17	79839588	79839712	(3417729)	+	G-rich	Low_complexity	1	126	(0)	1684014
43	9.9	0.0	0.0	chr17	80006184	80006248	(3251193)	+	(CTCT)n	Simple_repeat	1	65	(0)	1684283
704	21.4	2.9	0.0	chr17	80006262	80006429	(3251012)	C	MER5B	DNA/hAT-Charlie	(0)	178	6	1684284
201	29.9	3.8	1.3	chr17	80058260	80058337	(3199104)	+	L2c	LINE/L2	3239	3318	(69)	1684387
521	26.9	10.9	3.6	chr17	81003509	81003813	(2253628)	C	L1ME1	LINE/L1	(54)	6125	5796	1685765
20	7.9	0.0	0.0	chr17	81395099	81395125	(1862316)	+	(TG)n	Simple_repeat	1	27	(0)	1686226
377	22.6	0.0	6.7	chr17	81412743	81412846	(1844595)	C	MLT1F2	LTR/ERVL-MaLR	(38)	642	460	1686239
16	6.4	12.1	0.0	chr17	81512837	81512869	(1744572)	+	(GC)n	Simple_repeat	1	37	(0)	1686352
21	21.1	0.0	0.0	chr17	82098063	82098111	(1159330)	+	(CCCCGG)n	Simple_repeat	1	49	(0)	1687135
1914	18.4	0.7	0.0	chr17	82338398	82338706	(918735)	+	AluJb	SINE/Alu	1	311	(1)	1687503
454	19.2	1.0	0.0	chr17	82338743	82338841	(918600)	+	MER41G	LTR/ERV1	273	372	(513)	1687504
2565	20.3	1.5	1.1	chr17	82338920	82339456	(917985)	+	MER41G	LTR/ERV1	347	885	(0)	1687504
4176	10.1	8.1	0.0	chr17	82344952	82345557	(911884)	+	PABL_A	LTR/ERV1	1	659	(1)	1687515
364	30.0	7.4	7.0	chr17	82461940	82462154	(795287)	+	MIRb	SINE/MIR	2	217	(51)	1687674
2095	10.7	2.3	1.0	chr17	82493739	82494038	(763403)	C	AluJb	SINE/Alu	(8)	304	1	1687728
41	0.0	0.0	0.0	chr17	82494059	82494093	(763348)	+	(AG)n	Simple_repeat	1	35	(0)	1687729
24	0.0	0.0	0.0	chr17	82573537	82573562	(683879)	+	(CT)n	Simple_repeat	1	26	(0)	1687915
44	0.0	0.0	0.0	chr17	82573563	82573600	(683841)	+	(CA)n	Simple_repeat	1	38	(0)	1687916
26	13.8	5.3	0.0	chr17	82881885	82881945	(375496)	+	(CTCC)n	Simple_repeat	1	64	(0)	1688365
607	22.6	6.9	3.5	chr17	83120138	83120334	(137107)	+	L1MB7	LINE/L1	5981	6184	(0)	1688583
1677	8.9	1.3	0.0	chr18	136971	137195	(80236090)	+	AluSx	SINE/Alu	49	276	(36)	1689253
29	5.6	0.0	0.0	chr18	137206	137242	(80236043)	+	(AG)n	Simple_repeat	1	37	(0)	1689254
673	9.8	0.0	0.0	chr18	137268	137349	(80235936)	C	AluSz	SINE/Alu	(230)	82	1	1689255
35	0.0	0.0	0.0	chr18	295692	295721	(80077564)	+	(TC)n	Simple_repeat	1	30	(0)	1689561
29	0.0	0.0	0.0	chr18	479527	479551	(79893734)	+	(CT)n	Simple_repeat	1	25	(0)	1689855
27	13.0	0.0	0.0	chr18	479552	479593	(79893692)	+	(AC)n	Simple_repeat	1	42	(0)	1689856
12	18.3	0.0	3.0	chr18	479715	479747	(79893538)	+	A-rich	Low_complexity	1	33	(0)	1689857
1432	15.8	1.2	4.2	chr18	579754	580013	(79793272)	+	AluJb	SINE/Alu	1	252	(60)	1690042
32	0.0	3.2	0.0	chr18	580021	580051	(79793234)	+	(AG)n	Simple_repeat	1	32	(0)	1690043
6052	17.2	5.0	6.7	chr18	591724	591972	(79781313)	C	L1MDa	LINE/L1	(2624)	3913	3665	1690058
80	0.0	0.0	0.0	chr18	591973	592040	(79781245)	+	(CT)n	Simple_repeat	1	68	(0)	1690062
6052	17.2	5.0	6.7	chr18	592041	593126	(79780159)	C	L1MDa	LINE/L1	(2873)	3664	2600	1690058
12	11.0	6.7	6.2	chr18	657966	658010	(79715275)	+	G-rich	Low_complexity	1	48	(0)	1690194
1123	17.0	3.5	2.0	chr18	785735	785934	(79587351)	+	AluJo	SINE/Alu	79	281	(31)	1690445
1095	18.1	4.7	2.4	chr18	785939	786147	(79587138)	+	MSTD	LTR/ERVL-MaLR	181	394	(2)	1690444
634	22.1	9.4	6.5	chr18	792372	792525	(79580760)	+	AluJo	SINE/Alu	118	276	(36)	1690462
33	3.1	0.0	0.0	chr18	792528	792560	(79580725)	+	(TC)n	Simple_repeat	1	33	(0)	1690463
19	0.0	0.0	0.0	chr18	792566	792586	(79580699)	+	(TG)n	Simple_repeat	1	21	(0)	1690464
28	24.5	0.0	0.0	chr18	792586	792646	(79580639)	+	(TA)n	Simple_repeat	1	61	(0)	1690465
19	10.5	0.0	0.0	chr18	792649	792679	(79580606)	+	(AGC)n	Simple_repeat	1	31	(0)	1690466
946	13.8	0.0	4.3	chr18	792680	792817	(79580468)	+	AluJr4	SINE/Alu	2	133	(179)	1690467
2218	10.3	0.7	2.8	chr18	815152	815441	(79557844)	+	AluSq2	SINE/Alu	1	284	(29)	1690511
18	0.0	10.7	0.0	chr18	830170	830197	(79543088)	+	(TC)n	Simple_repeat	1	31	(0)	1690550
1656	25.6	4.0	1.1	chr18	1003192	1003629	(79369656)	C	LTR16A	LTR/ERVL	(0)	451	1	1690850
6543	24.5	3.6	4.3	chr18	1003630	1003646	(79369639)	C	ERV3-16A3_I-int	LTR/ERVL	(0)	5226	5211	1690850
2364	13.9	3.8	3.5	chr18	1003647	1003886	(79369399)	C	MSTB	LTR/ERVL-MaLR	(0)	426	176	1690851
2520	7.7	0.0	0.0	chr18	1003887	1004185	(79369100)	C	AluY	SINE/Alu	(12)	299	1	1690852
6543	24.5	3.6	4.3	chr18	1004370	1006366	(79366919)	C	ERV3-16A3_I-int	LTR/ERVL	(16)	5210	3226	1690850
22	3.8	0.0	0.0	chr18	1078012	1078038	(79295247)	+	(TG)n	Simple_repeat	1	27	(0)	1690931
35	0.0	0.0	0.0	chr18	1078039	1078068	(79295217)	+	(GA)n	Simple_repeat	1	30	(0)	1690932
19	4.3	0.0	0.0	chr18	1460740	1460763	(78912522)	+	(CT)n	Simple_repeat	1	24	(0)	1691403
40	2.6	0.0	0.0	chr18	1460764	1460802	(78912483)	+	(CA)n	Simple_repeat	1	39	(0)	1691404
2310	14.8	8.1	0.2	chr18	1529769	1530319	(78842966)	+	L1PA16	LINE/L1	4026	4671	(1475)	1691488
280	33.6	5.4	3.5	chr18	2172880	2173024	(78200261)	C	MIR3	SINE/MIR	(10)	198	51	1692300
30	3.5	0.0	0.0	chr18	2173132	2173161	(78200124)	+	(TC)n	Simple_repeat	1	30	(0)	1692301
15	0.0	0.0	0.0	chr18	2173162	2173178	(78200107)	+	(AC)n	Simple_repeat	1	17	(0)	1692302
2012	18.3	8.9	0.3	chr18	2307700	2308088	(78065197)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1692480
37	0.0	2.5	2.4	chr18	2308148	2308187	(78065098)	+	(TC)n	Simple_repeat	1	41	(0)	1692481
1369	23.1	0.3	5.5	chr18	2820906	2821253	(77552032)	C	MLT2B3	LTR/ERVL	(2)	552	223	1693322
33	15.8	3.1	0.0	chr18	2821254	2821317	(77551968)	+	GA-rich	Low_complexity	1	66	(0)	1693323
3457	19.1	3.9	1.2	chr18	2821374	2822437	(77550848)	C	ERVL-B4-int	LTR/ERVL	(488)	5269	3899	1693324
17	15.4	6.2	5.8	chr18	3450073	3450137	(76923148)	+	(GCG)n	Simple_repeat	1	69	(0)	1694438
14	18.7	5.0	4.8	chr18	3450196	3450255	(76923030)	+	GA-rich	Low_complexity	1	63	(0)	1694439
2107	9.3	3.4	1.4	chr18	3606843	3607132	(76766153)	C	AluSq	SINE/Alu	(17)	296	1	1694739
1454	15.0	13.7	1.1	chr18	3607191	3607457	(76765828)	C	AluJr	SINE/Alu	(6)	306	1	1694740
2375	10.0	0.3	0.0	chr18	3622794	3623103	(76750182)	C	AluSz	SINE/Alu	(1)	311	1	1694781
446	28.8	5.3	0.5	chr18	3623105	3623292	(76749993)	+	MIR	SINE/MIR	55	245	(17)	1694782
225	33.9	8.9	0.0	chr18	3649528	3649639	(76723646)	C	MIRb	SINE/MIR	(22)	246	124	1694835
11	26.7	4.1	0.0	chr18	3649770	3649818	(76723467)	+	A-rich	Low_complexity	1	51	(0)	1694836
22	6.7	3.1	0.0	chr18	8365619	8365650	(72007635)	+	(TC)n	Simple_repeat	1	33	(0)	1701276
19	11.3	0.0	0.0	chr18	8821084	8821112	(71552173)	+	(CT)n	Simple_repeat	1	29	(0)	1701965
1733	20.4	15.9	5.5	chr18	8874688	8875236	(71498049)	C	MLT1E3	LTR/ERVL-MaLR	(3)	621	5	1702048
82	0.0	2.6	0.0	chr18	8875336	8875412	(71497873)	+	(CT)n	Simple_repeat	1	79	(0)	1702049
486	30.7	5.2	1.8	chr18	8875427	8875592	(71497693)	C	LTR16A	LTR/ERVL	(99)	352	181	1702050
20968	7.0	1.1	2.1	chr18	8877339	8881515	(71491770)	C	HERVIP10FH-int	LTR/ERV1	(2)	7735	687	1702053
8295	7.5	1.9	3.0	chr18	8881493	8882638	(71490647)	C	HERVIP10FH-int	LTR/ERV1	(6309)	1428	340	1702053
54082	6.1	1.9	0.5	chr18	8914110	8920902	(71452383)	+	Harlequin-int	LTR/ERV1	1	6896	(0)	1702087
2658	16.5	8.4	2.5	chr18	8938685	8938804	(71434481)	+	LTR49	LTR/ERV1	424	564	(31)	1702121
2281	15.5	4.9	1.0	chr18	8938805	8939215	(71434070)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1702124
2521	13.7	4.7	0.5	chr18	8994214	8994623	(71378662)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1702228
1528	21.8	0.3	4.8	chr18	9008381	9008704	(71364581)	+	MER2	DNA/TcMar-Tigger	1	309	(36)	1702256
3723	11.7	1.2	1.4	chr18	9008705	9009267	(71364018)	C	LTR73	LTR/ERV1	(0)	572	11	1702257
258	32.4	7.9	3.8	chr18	9104241	9104532	(71268753)	C	L2b	LINE/L2	(470)	2949	2645	1702464
28	18.2	6.6	0.0	chr18	9104657	9104732	(71268553)	+	(TCCC)n	Simple_repeat	1	81	(0)	1702466
316	23.1	6.9	6.2	chr18	9104802	9104930	(71268355)	C	L1ME4a	LINE/L1	(7)	6117	5988	1702467
1793	19.0	9.8	6.6	chr18	9106640	9107123	(71266162)	C	MLT1D	LTR/ERVL-MaLR	(4)	501	1	1702472
519	34.9	9.5	1.4	chr18	9938269	9938634	(70434651)	C	L4_B_Mam	LINE/RTE-X	(646)	4295	3897	1703897
1006	26.0	4.0	6.6	chr18	9938782	9939167	(70434118)	C	L1MC5	LINE/L1	(14)	9290	8915	1703898
24738	6.2	0.3	0.9	chr18	10599605	10602698	(69770587)	C	Harlequin-int	LTR/ERV1	(1770)	5126	2053	1704758
6705	6.8	5.6	3.7	chr18	10602685	10602793	(69770492)	C	Harlequin-int	LTR/ERV1	(5957)	939	864	1704758
49	3.8	7.1	2.2	chr18	10602794	10602878	(69770407)	+	(TC)n	Simple_repeat	1	91	(0)	1704759
6705	8.4	2.9	2.0	chr18	10602879	10603735	(69769550)	C	Harlequin-int	LTR/ERV1	(6033)	863	2	1704758
37	0.0	0.0	0.0	chr18	11143601	11143639	(69229646)	+	(AC)n	Simple_repeat	1	39	(0)	1705467
50	2.2	0.0	0.0	chr18	11143640	11143686	(69229599)	+	(CT)n	Simple_repeat	1	47	(0)	1705468
1957	12.4	4.9	1.4	chr18	11369537	11369889	(69003396)	C	THE1D	LTR/ERVL-MaLR	(0)	381	16	1705764
1650	17.3	14.6	6.7	chr18	12155896	12156043	(68217242)	+	MSTB	LTR/ERVL-MaLR	1	200	(226)	1706981
32	3.2	0.0	0.0	chr18	12156044	12156075	(68217210)	+	(TC)n	Simple_repeat	1	32	(0)	1706982
1650	17.3	14.6	6.7	chr18	12156076	12156316	(68216969)	+	MSTB	LTR/ERVL-MaLR	201	426	(0)	1706981
18	9.4	0.0	5.3	chr18	12883964	12884001	(67489284)	+	(GCGAGAG)n	Simple_repeat	1	38	(0)	1708293
20	3.0	2.6	5.1	chr18	12884216	12884253	(67489032)	+	(GCGCTGC)n	Simple_repeat	1	39	(0)	1708294
15	19.1	5.9	3.7	chr18	12884254	12884266	(67489019)	+	(GC)n	Simple_repeat	1	54	(0)	1708295
2256	11.6	0.0	0.0	chr18	12897574	12897866	(67475419)	+	AluSx1	SINE/Alu	1	293	(19)	1708331
52	7.6	0.0	0.0	chr18	12897867	12897935	(67475350)	+	(GA)n	Simple_repeat	1	69	(0)	1708332
302	21.1	1.7	0.0	chr18	12897936	12897992	(67475293)	+	L1MEg	LINE/L1	1883	1940	(4144)	1708333
671	25.3	4.1	0.5	chr18	12898002	12898188	(67475097)	+	LTR16E2	LTR/ERVL	372	565	(3)	1708326
1321	21.7	15.1	4.3	chr18	12902201	12902599	(67470686)	+	MLT2B1	LTR/ERVL	2	451	(69)	1708340
33	0.0	3.1	0.0	chr18	12902600	12902631	(67470654)	+	(TC)n	Simple_repeat	1	33	(0)	1708341
3610	13.9	2.4	6.8	chr18	12902649	12902870	(67470415)	+	Tigger3b	DNA/TcMar-Tigger	6	211	(1020)	1708342
2225	12.6	0.0	0.0	chr18	21078047	21078332	(59294953)	+	AluSz6	SINE/Alu	1	286	(26)	1711870
38	0.0	0.0	0.0	chr18	21078342	21078374	(59294911)	+	(AC)n	Simple_repeat	1	33	(0)	1711871
24	0.0	0.0	0.0	chr18	21078375	21078400	(59294885)	+	(GA)n	Simple_repeat	1	26	(0)	1711872
518	6.1	18.9	2.9	chr18	21078407	21078508	(59294777)	+	LTR9B	LTR/ERV1	1	122	(522)	1711873
9097	17.0	4.3	0.5	chr18	21078509	21080065	(59293220)	C	HUERS-P3-int	LTR/ERV1	(5835)	3084	1467	1711874
120	29.2	3.0	0.0	chr18	22204077	22204391	(58168894)	+	(TCTC)n	Simple_repeat	1	370	(0)	1714125
38	5.0	0.0	0.0	chr18	23052290	23052331	(57320954)	+	(AG)n	Simple_repeat	1	42	(0)	1715489
279	22.9	17.2	0.0	chr18	23052436	23052531	(57320754)	+	MamRep4096	DNA/hAT-Tip100	311	426	(0)	1715490
437	36.2	4.1	2.9	chr18	23422356	23422671	(56950614)	+	L2b	LINE/L2	2525	2844	(575)	1716169
422	29.2	10.7	4.8	chr18	23422700	23423015	(56950270)	C	Chap1_Mam	DNA/hAT-Charlie	(0)	342	6	1716170
1785	18.5	3.8	3.8	chr18	23795828	23796197	(56577088)	+	MLT1A	LTR/ERVL-MaLR	4	373	(1)	1716877
1103	27.3	12.0	3.6	chr18	23796198	23796453	(56576832)	C	MLT1K	LTR/ERVL-MaLR	(266)	329	42	1716876
13	18.7	0.0	5.0	chr18	25239925	25239964	(55133321)	+	(TCCCTC)n	Simple_repeat	1	40	(0)	1719085
15	0.0	0.0	0.0	chr18	25285682	25285698	(55087587)	+	(TC)n	Simple_repeat	1	17	(0)	1719133
38	0.0	0.0	0.0	chr18	25285699	25285731	(55087554)	+	(CA)n	Simple_repeat	1	33	(0)	1719134
1287	27.7	7.6	4.2	chr18	25503363	25503935	(54869350)	C	MLT2F	LTR/ERVL	(69)	594	1	1719422
45	6.0	0.0	0.0	chr18	25504018	25504069	(54869216)	+	(TC)n	Simple_repeat	1	52	(0)	1719423
72	2.9	0.0	0.0	chr18	25853207	25853276	(54520009)	+	(CT)n	Simple_repeat	1	70	(0)	1719905
281	23.8	18.4	0.6	chr18	25957331	25957495	(54415790)	C	LTR85b	LTR/Gypsy?	(127)	657	457	1720079
17	7.9	0.0	6.5	chr18	25957521	25957560	(54415725)	+	(TC)n	Simple_repeat	1	37	(0)	1720080
51	2.1	0.0	0.0	chr18	25957561	25957608	(54415677)	+	(CA)n	Simple_repeat	1	48	(0)	1720081
730	17.7	2.0	3.9	chr18	26223791	26223943	(54149342)	+	AluJb	SINE/Alu	130	279	(33)	1720569
44	2.4	0.0	0.0	chr18	26223989	26224030	(54149255)	+	(AC)n	Simple_repeat	1	42	(0)	1720571
17	5.0	0.0	0.0	chr18	26224032	26224052	(54149233)	+	(AG)n	Simple_repeat	1	21	(0)	1720572
183	32.2	3.2	2.2	chr18	30427316	30427407	(49945878)	+	L2a	LINE/L2	1956	2048	(1371)	1726316
23	3.7	0.0	0.0	chr18	30427592	30427619	(49945666)	+	(CA)n	Simple_repeat	1	28	(0)	1726317
20	4.2	0.0	0.0	chr18	30427621	30427645	(49945640)	+	(AG)n	Simple_repeat	1	25	(0)	1726318
469	30.3	7.5	7.2	chr18	30427693	30427998	(49945287)	+	L1MEc	LINE/L1	813	1119	(5296)	1726319
444	26.4	10.7	0.6	chr18	30613144	30613311	(49759974)	+	HERVL40-int	LTR/ERVL	958	1144	(4386)	1726604
80	2.7	0.0	0.0	chr18	30613323	30613399	(49759886)	+	(TC)n	Simple_repeat	1	77	(0)	1726605
17	22.4	4.6	5.5	chr18	30871929	30872015	(49501270)	+	A-rich	Low_complexity	1	91	(0)	1726893
36	9.0	3.3	0.0	chr18	30872060	30872119	(49501166)	+	(TC)n	Simple_repeat	1	62	(0)	1726894
431	18.2	0.0	4.3	chr18	30872123	30872214	(49501071)	C	MLT1F	LTR/ERVL-MaLR	(479)	90	3	1726892
30	3.5	0.0	0.0	chr18	31170480	31170509	(49202776)	+	(AG)n	Simple_repeat	1	30	(0)	1727307
1114	16.9	17.6	2.4	chr18	31226426	31226580	(49146705)	+	AluJo	SINE/Alu	1	204	(108)	1727399
68	3.0	0.0	0.0	chr18	31226581	31226647	(49146638)	+	(GA)n	Simple_repeat	1	67	(0)	1727400
1114	16.9	17.6	2.4	chr18	31226648	31226740	(49146545)	+	AluJo	SINE/Alu	205	295	(17)	1727399
27	10.8	0.0	0.0	chr18	31480675	31480714	(48892571)	+	(GA)n	Simple_repeat	1	40	(0)	1727728
199	34.3	4.1	3.5	chr18	31480715	31480859	(48892426)	+	L3b	LINE/CR1	4865	5010	(222)	1727729
493	31.4	9.3	5.4	chr18	32085287	32085373	(48287912)	C	LTR33A_	LTR/ERVL	(220)	300	199	1728807
50	0.0	0.0	0.0	chr18	32085374	32085416	(48287869)	+	(AG)n	Simple_repeat	1	43	(0)	1728808
2209	11.8	0.3	0.3	chr18	32085419	32085724	(48287561)	+	AluSq2	SINE/Alu	2	307	(6)	1728809
487	25.7	10.4	5.1	chr18	32693016	32693269	(47680016)	+	LTR16A1	LTR/ERVL	1	269	(187)	1729740
34	0.0	0.0	0.0	chr18	32693378	32693413	(47679872)	+	(AC)n	Simple_repeat	1	36	(0)	1729741
44	0.0	0.0	0.0	chr18	32693414	32693451	(47679834)	+	(AG)n	Simple_repeat	1	38	(0)	1729742
15	25.2	0.0	3.6	chr18	32693467	32693521	(47679764)	+	A-rich	Low_complexity	1	55	(0)	1729743
402	33.2	9.8	7.7	chr18	34968633	34968838	(45404447)	+	L2	LINE/L2	2335	2563	(856)	1732673
29	0.0	0.0	0.0	chr18	34968839	34968863	(45404422)	+	(CT)n	Simple_repeat	1	25	(0)	1732674
402	33.2	9.8	7.7	chr18	34968864	34969175	(45404110)	+	L2	LINE/L2	2564	2865	(554)	1732673
864	15.3	5.8	0.6	chr18	35174227	35174390	(45198895)	+	MLT1B	LTR/ERVL-MaLR	1	173	(217)	1732946
20	31.6	0.0	0.0	chr18	35174406	35174468	(45198817)	+	(CTCT)n	Simple_repeat	1	63	(0)	1732947
2328	4.3	1.5	0.0	chr18	35240456	35240713	(45132572)	C	AluY	SINE/Alu	(8)	303	42	1733038
192	20.0	0.0	0.0	chr18	35290721	35290755	(45082530)	+	MamRTE1	LINE/RTE-BovB	3771	3805	(7)	1733113
22	0.0	0.0	0.0	chr18	35411275	35411298	(44961987)	+	(CT)n	Simple_repeat	1	24	(0)	1733278
54	0.0	0.0	0.0	chr18	35411299	35411344	(44961941)	+	(CA)n	Simple_repeat	1	46	(0)	1733279
57	0.0	1.9	0.0	chr18	35413034	35413085	(44960200)	+	(AG)n	Simple_repeat	1	53	(0)	1733281
735	23.3	3.3	0.1	chr18	35567900	35568092	(44805193)	C	MLT1B	LTR/ERVL-MaLR	(10)	380	173	1733524
41	4.0	1.9	0.0	chr18	35568093	35568144	(44805141)	+	(AG)n	Simple_repeat	1	53	(0)	1733525
872	21.6	17.6	2.5	chr18	35568259	35568653	(44804632)	+	L1MD2	LINE/L1	5903	6357	(2)	1733523
2790	14.9	12.4	3.2	chr18	35730700	35731255	(44642030)	C	LTR18B	LTR/ERVL	(0)	614	1	1733737
20	0.0	0.0	0.0	chr18	36188917	36188938	(44184347)	+	(TC)n	Simple_repeat	1	22	(0)	1734454
742	21.9	2.7	4.4	chr18	36254174	36254402	(44118883)	C	Charlie2b	DNA/hAT-Charlie	(0)	2782	2558	1734541
48	0.0	0.0	0.0	chr18	36254459	36254499	(44118786)	+	(TG)n	Simple_repeat	1	41	(0)	1734542
27	6.0	0.0	0.0	chr18	36254502	36254536	(44118749)	+	(AG)n	Simple_repeat	1	35	(0)	1734543
15	32.3	0.0	0.0	chr18	36254579	36254620	(44118665)	+	(AT)n	Simple_repeat	1	42	(0)	1734544
1218	24.6	9.1	18.2	chr18	36254621	36255459	(44117826)	C	Charlie2b	DNA/hAT-Charlie	(251)	2531	1777	1734541
320	37.8	3.9	1.5	chr18	36369168	36369366	(44003919)	+	L1MC	LINE/L1	4156	4359	(1787)	1734711
69	0.0	0.0	0.0	chr18	36369441	36369499	(44003786)	+	(AC)n	Simple_repeat	1	59	(0)	1734712
20	0.0	0.0	0.0	chr18	36369507	36369528	(44003757)	+	(AG)n	Simple_repeat	1	22	(0)	1734713
20	18.2	6.0	0.0	chr18	36369594	36369643	(44003642)	+	(TA)n	Simple_repeat	1	53	(0)	1734714
44	0.0	0.0	0.0	chr18	36664778	36664815	(43708470)	+	(GA)n	Simple_repeat	1	38	(0)	1735072
1421	15.7	15.0	0.0	chr18	36664855	36665103	(43708182)	+	AluJr	SINE/Alu	1	293	(19)	1735073
282	30.7	1.1	1.1	chr18	44736967	44737055	(35636230)	+	L2b	LINE/L2	3287	3375	(0)	1745886
40	0.0	0.0	0.0	chr18	45765706	45765739	(34607546)	+	(AG)n	Simple_repeat	1	34	(0)	1747398
18	0.0	0.0	0.0	chr18	45765740	45765759	(34607526)	+	(TG)n	Simple_repeat	1	20	(0)	1747399
1622	20.5	5.9	6.8	chr18	45765760	45766188	(34607097)	C	MLT1C	LTR/ERVL-MaLR	(42)	425	1	1747400
911	16.7	0.0	0.7	chr18	45999856	45999999	(34373286)	+	AluJb	SINE/Alu	1	143	(169)	1747785
688	28.4	2.6	1.7	chr18	46348719	46348900	(34024385)	C	MER103C	DNA/hAT-Charlie	(56)	241	59	1748491
56	0.0	0.0	0.0	chr18	46348901	46348948	(34024337)	+	(TG)n	Simple_repeat	1	48	(0)	1748492
688	28.4	2.6	1.7	chr18	46348949	46348998	(34024287)	C	MER103C	DNA/hAT-Charlie	(239)	58	7	1748491
272	19.5	4.9	4.5	chr18	46397372	46398295	(33974990)	+	(TG)n	Simple_repeat	1	969	(0)	1748584
2230	9.8	0.3	0.0	chr18	46439820	46440125	(33933160)	C	AluSc	SINE/Alu	(0)	309	3	1748658
1154	20.2	7.8	7.8	chr18	46440126	46440181	(33933104)	C	L1MC5	LINE/L1	(122)	9355	9318	1748657
1533	16.9	3.3	4.4	chr18	46440182	46440521	(33932764)	+	MER44A	DNA/TcMar-Tigger	1	336	(3)	1748659
2055	15.6	11.7	0.8	chr18	47195973	47196353	(33176932)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1749841
1183	25.4	8.6	5.4	chr18	47780151	47780377	(32592908)	+	MLT1G1	LTR/ERVL-MaLR	2	231	(348)	1750797
30	0.0	0.0	0.0	chr18	47780378	47780403	(32592882)	+	(TC)n	Simple_repeat	1	26	(0)	1750798
1183	25.4	8.6	5.4	chr18	47780404	47780658	(32592627)	+	MLT1G1	LTR/ERVL-MaLR	232	500	(79)	1750797
19	12.8	0.0	0.0	chr18	47931271	47931304	(32441981)	+	(GGCGG)n	Simple_repeat	1	34	(0)	1751016
29	26.6	2.6	2.6	chr18	48161692	48161804	(32211481)	+	(CCCGC)n	Simple_repeat	1	116	(0)	1751434
13	11.6	0.0	6.2	chr18	48161947	48161978	(32211307)	+	(GGCCC)n	Simple_repeat	1	32	(0)	1751435
2431	15.9	4.5	0.0	chr18	48533658	48533859	(31839426)	C	MSTA	LTR/ERVL-MaLR	(0)	428	209	1752068
31	3.3	0.0	0.0	chr18	48533860	48533890	(31839395)	+	(GA)n	Simple_repeat	1	31	(0)	1752069
2431	15.9	4.5	0.0	chr18	48533891	48534095	(31839190)	C	MSTA	LTR/ERVL-MaLR	(220)	208	3	1752068
1797	26.1	4.8	4.8	chr18	48728382	48728924	(31644361)	C	MLT1F	LTR/ERVL-MaLR	(0)	560	18	1752359
33	0.0	0.0	0.0	chr18	48913791	48913818	(31459467)	+	(AG)n	Simple_repeat	1	28	(0)	1752663
487	15.5	4.0	1.4	chr18	48913831	48913942	(31459343)	C	MLT1J1	LTR/ERVL-MaLR	(230)	181	69	1752664
421	26.9	5.7	5.1	chr18	48914049	48914224	(31459061)	+	MIRb	SINE/MIR	11	187	(81)	1752665
42	7.8	0.0	0.0	chr18	48929517	48929570	(31443715)	+	(TC)n	Simple_repeat	1	54	(0)	1752689
29	0.0	0.0	0.0	chr18	48929574	48929598	(31443687)	+	(CA)n	Simple_repeat	1	25	(0)	1752690
54	0.0	0.0	0.0	chr18	49317552	49317597	(31055688)	+	(TC)n	Simple_repeat	1	46	(0)	1753303
24	0.0	3.1	0.0	chr18	49317598	49317631	(31055654)	+	(CCCT)n	Simple_repeat	1	35	(0)	1753304
51	0.0	0.0	5.0	chr18	49317632	49317691	(31055594)	+	(TCCT)n	Simple_repeat	1	60	(0)	1753305
531	12.7	0.0	0.0	chr18	49317703	49317773	(31055512)	C	AluSc8	SINE/Alu	(108)	203	133	1753306
3159	17.5	6.0	6.4	chr18	49529740	49530196	(30843089)	+	MER4-int	LTR/ERV1	1526	1966	(4632)	1753719
1115	15.0	2.3	0.0	chr18	49530197	49530369	(30842916)	+	AluSx	SINE/Alu	134	310	(2)	1753730
1679	17.6	5.6	0.8	chr18	49558263	49558431	(30814854)	+	MLT1A	LTR/ERVL-MaLR	2	187	(187)	1753796
50	0.0	2.2	0.0	chr18	49558432	49558477	(30814808)	+	(TC)n	Simple_repeat	1	47	(0)	1753797
1679	17.6	5.6	0.8	chr18	49558478	49558662	(30814623)	+	MLT1A	LTR/ERVL-MaLR	188	373	(1)	1753796
1184	21.5	15.6	11.4	chr18	51006973	51007429	(29365856)	+	LTR21A	LTR/ERV1	2	481	(0)	1756195
8578	14.4	2.6	0.7	chr18	51007430	51007791	(29365494)	+	HERVL-int	LTR/ERVL	5295	5654	(0)	1756192
739	22.5	16.0	1.3	chr18	51541404	51541532	(28831753)	C	MLT1F1	LTR/ERVL-MaLR	(178)	391	255	1757169
40	2.6	0.0	0.0	chr18	51541533	51541571	(28831714)	+	(GA)n	Simple_repeat	1	39	(0)	1757170
739	23.0	17.2	2.5	chr18	51541572	51541752	(28831533)	C	MLT1F1	LTR/ERVL-MaLR	(315)	254	1	1757169
188	32.0	2.4	12.6	chr18	54957418	54957560	(25415725)	+	L2b	LINE/L2	3248	3375	(0)	1762016
15	0.0	0.0	0.0	chr18	54957611	54957627	(25415658)	+	(AC)n	Simple_repeat	1	17	(0)	1762017
36	0.0	0.0	0.0	chr18	54957628	54957658	(25415627)	+	(CT)n	Simple_repeat	1	31	(0)	1762018
328	21.6	1.8	4.3	chr18	54957660	54957775	(25415510)	+	Charlie23a	DNA/hAT-Charlie	137	249	(90)	1762019
32	10.8	0.0	0.0	chr18	55096557	55096606	(25276679)	+	(TC)n	Simple_repeat	1	50	(0)	1762215
43	4.5	0.0	0.0	chr18	55096612	55096657	(25276628)	+	(CA)n	Simple_repeat	1	46	(0)	1762216
46	0.0	0.0	0.0	chr18	55183134	55183172	(25190113)	+	(TC)n	Simple_repeat	1	39	(0)	1762336
301	28.1	8.9	0.0	chr18	55183173	55183254	(25190031)	C	L2a	LINE/L2	(41)	3385	3296	1762337
637	30.5	0.5	3.4	chr18	55183328	55183534	(25189751)	+	MLT1H	LTR/ERVL-MaLR	119	319	(230)	1762338
353	23.0	3.0	4.4	chr18	55190509	55190713	(25182572)	C	L1MEi	LINE/L1	(1209)	1003	802	1762352
30	0.0	0.0	0.0	chr18	55190722	55190754	(25182531)	+	(TG)n	Simple_repeat	1	33	(0)	1762353
41	4.7	0.0	0.0	chr18	55190755	55190798	(25182487)	+	(GA)n	Simple_repeat	1	44	(0)	1762354
1730	15.0	4.2	0.0	chr18	55190814	55191066	(25182219)	C	AluJb	SINE/Alu	(48)	264	1	1762355
295	19.8	10.0	1.2	chr18	55399730	55399811	(24973474)	C	MER5B	DNA/hAT-Charlie	(11)	167	78	1762619
42	9.3	0.0	0.0	chr18	55399823	55399880	(24973405)	+	(CT)n	Simple_repeat	1	58	(0)	1762620
54	0.0	0.0	0.0	chr18	55399881	55399926	(24973359)	+	(CA)n	Simple_repeat	1	46	(0)	1762621
31	11.5	0.0	0.0	chr18	55585862	55585908	(24787377)	+	(CT)n	Simple_repeat	1	47	(0)	1762863
1590	18.8	0.7	3.2	chr18	55703727	55704040	(24669245)	+	MER54B	LTR/ERVL	6	311	(482)	1763075
48	0.0	0.0	0.0	chr18	55704078	55704118	(24669167)	+	(TG)n	Simple_repeat	1	41	(0)	1763076
1505	19.9	2.7	4.5	chr18	56662903	56663281	(23710004)	C	MLT1A	LTR/ERVL-MaLR	(2)	372	1	1764455
526	28.5	10.0	9.0	chr18	56663282	56663576	(23709709)	+	L1MC5a	LINE/L1	2364	2584	(193)	1764454
51	0.0	0.0	0.0	chr18	57326547	57326590	(23046695)	+	(TG)n	Simple_repeat	1	44	(0)	1765403
53	23.2	1.6	0.8	chr18	57326593	57326671	(23046614)	+	GA-rich	Low_complexity	1	153	(0)	1765404
16	28.5	2.7	2.7	chr18	57326672	57326744	(23046541)	+	A-rich	Low_complexity	1	75	(0)	1765405
256	32.0	4.8	1.0	chr18	57844876	57844976	(22528309)	+	MLT1O	LTR/ERVL-MaLR	103	207	(335)	1766297
51	2.1	0.0	0.0	chr18	57845022	57845069	(22528216)	+	(GA)n	Simple_repeat	1	48	(0)	1766298
228	26.3	8.4	0.0	chr18	57845108	57845183	(22528102)	+	MLT1O	LTR/ERVL-MaLR	433	515	(27)	1766297
2351	9.4	0.0	0.3	chr18	57845195	57845492	(22527793)	C	AluSq2	SINE/Alu	(16)	297	1	1766299
35	0.0	0.0	0.0	chr18	61088928	61088965	(19284320)	+	(GA)n	Simple_repeat	1	38	(0)	1771413
51	0.0	0.0	0.0	chr18	61088966	61089009	(19284276)	+	(GT)n	Simple_repeat	1	44	(0)	1771414
22	0.0	3.7	0.0	chr18	61980548	61980574	(18392711)	+	(AG)n	Simple_repeat	1	28	(0)	1772745
236	27.0	5.1	0.0	chr18	62499413	62499486	(17873799)	C	MER115	DNA/hAT-Tip100	(575)	118	41	1773554
27	8.7	0.0	0.0	chr18	62499528	62499564	(17873721)	+	(CT)n	Simple_repeat	1	37	(0)	1773555
351	8.9	5.1	0.0	chr18	62499606	62499661	(17873624)	C	L1MD2	LINE/L1	(11)	6348	6290	1773556
1184	19.6	12.1	9.7	chr18	69817389	69817749	(10555536)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	20	1783713
28	30.3	0.3	11.0	chr18	69839094	69839427	(10533858)	+	(CCTCC)n	Simple_repeat	1	335	(0)	1783744
255	18.4	3.9	0.0	chr19	1591116	1591190	(57026426)	+	L2b	LINE/L2	3123	3198	(177)	1799090
247	15.2	6.9	2.8	chr19	1669504	1669539	(56948077)	+	(CTTCC)n	Simple_repeat	1	37	(0)	1799246
65	3.2	0.0	0.0	chr19	1669540	1669603	(56948013)	+	(CT)n	Simple_repeat	1	64	(0)	1799247
247	15.2	6.9	2.8	chr19	1669604	1670237	(56947379)	+	(CTTCC)n	Simple_repeat	2	661	(0)	1799248
2385	10.9	0.3	0.0	chr19	1723980	1724291	(56893325)	+	AluSq2	SINE/Alu	1	313	(0)	1799391
1511	15.6	1.1	9.4	chr19	1724296	1724418	(56893198)	C	AluJr	SINE/Alu	(30)	282	169	1799392
2378	11.0	0.7	0.0	chr19	1724419	1724728	(56892888)	+	AluSq2	SINE/Alu	1	312	(1)	1799393
41	18.4	0.0	0.0	chr19	1779385	1779465	(56838151)	+	GA-rich	Low_complexity	1	81	(0)	1799501
12	15.0	8.1	0.0	chr19	1779568	1779604	(56838012)	+	GA-rich	Low_complexity	1	40	(0)	1799502
975	21.1	10.7	0.5	chr19	2060604	2060997	(56556619)	+	MLT1D	LTR/ERVL-MaLR	71	505	(0)	1800056
13	21.2	1.8	7.0	chr19	2269498	2269553	(56348063)	+	(GGC)n	Simple_repeat	1	57	(0)	1800444
1411	11.3	1.7	22.5	chr19	2387524	2387766	(56229850)	+	AluJr	SINE/Alu	130	301	(11)	1800681
474	30.9	14.1	4.0	chr19	2387807	2388059	(56229557)	C	L2	LINE/L2	(561)	2858	2576	1800683
259	16.0	0.4	0.0	chr19	2657700	2657759	(55959857)	C	L1MD3	LINE/L1	(0)	8042	7931	1801359
322	13.2	0.0	0.0	chr19	2657760	2657812	(55959804)	+	LTR13	LTR/ERVK	1	53	(954)	1801360
2766	6.6	2.7	0.2	chr19	2657813	2658208	(55959408)	+	LTR13	LTR/ERVK	602	1007	(0)	1801360
337	34.4	11.0	2.4	chr19	2785868	2786206	(55831410)	C	L2a	LINE/L2	(1)	3425	3054	1801656
2187	10.1	0.0	0.3	chr19	2945533	2945829	(55671787)	+	AluSq	SINE/Alu	1	296	(17)	1801971
1201	21.9	14.0	0.9	chr19	2949859	2950319	(55667297)	+	LTR65	LTR/ERV1	1	524	(145)	1801984
239	32.6	10.1	3.0	chr19	3155444	3155544	(55462072)	C	MIRb	SINE/MIR	(116)	152	44	1802523
337	32.5	4.4	0.0	chr19	3184137	3184287	(55433329)	+	L2c	LINE/L2	3074	3231	(156)	1802587
715	31.2	2.9	4.2	chr19	3184283	3184593	(55433023)	+	L2b	LINE/L2	3048	3354	(21)	1802588
62	24.6	2.2	2.1	chr19	3274890	3275073	(55342543)	+	(TC)n	Simple_repeat	1	188	(0)	1802808
14	14.3	0.0	8.7	chr19	3275215	3275260	(55342356)	+	(GCCCA)n	Simple_repeat	1	46	(0)	1802809
46	0.0	0.0	0.0	chr19	3314381	3314419	(55303197)	+	(CA)n	Simple_repeat	1	39	(0)	1802907
56	4.3	4.2	0.0	chr19	3314510	3314581	(55303035)	+	(CT)n	Simple_repeat	1	75	(0)	1802908
42	30.4	5.0	1.3	chr19	3366345	3366566	(55251050)	+	G-rich	Low_complexity	1	233	(0)	1803067
20	26.2	1.5	2.9	chr19	3370333	3370399	(55247217)	+	(CT)n	Simple_repeat	1	68	(0)	1803080
123	21.5	2.8	0.0	chr19	3370477	3370763	(55246853)	+	(TCTC)n	Simple_repeat	1	295	(0)	1803081
65	8.1	1.0	1.0	chr19	3371861	3371881	(55245735)	+	(TC)n	Simple_repeat	1	22	(0)	1803086
76	5.9	0.0	0.0	chr19	3371882	3371971	(55245645)	+	(TCCT)n	Simple_repeat	1	90	(0)	1803087
65	8.1	1.0	1.0	chr19	3371972	3372042	(55245574)	+	(TC)n	Simple_repeat	1	71	(0)	1803088
2346	6.5	0.0	0.0	chr19	3372043	3372320	(55245296)	C	AluSx	SINE/Alu	(34)	278	1	1803089
16	12.1	0.0	0.0	chr19	3699410	3699437	(54918179)	+	(CGCC)n	Simple_repeat	1	28	(0)	1803806
1779	15.3	0.0	0.8	chr19	4005379	4005640	(54611976)	+	AluSq2	SINE/Alu	54	313	(0)	1804547
12	15.0	8.1	0.0	chr19	4005641	4005677	(54611939)	+	A-rich	Low_complexity	1	40	(0)	1804548
524	26.0	1.4	0.0	chr19	4005692	4005837	(54611779)	C	LTR54	LTR/ERV1	(349)	161	14	1804544
226	20.9	3.1	3.5	chr19	4145112	4145754	(54471862)	+	GA-rich	Low_complexity	1	663	(0)	1804864
2432	10.2	0.0	0.3	chr19	4155736	4156048	(54461568)	C	AluSq2	SINE/Alu	(1)	312	1	1804897
69	8.1	0.0	1.1	chr19	4156055	4156149	(54461467)	+	(TC)n	Simple_repeat	1	95	(0)	1804898
17	8.0	0.0	0.0	chr19	4156151	4156177	(54461439)	+	(CCCT)n	Simple_repeat	1	27	(0)	1804899
2210	12.3	0.3	0.7	chr19	4156178	4156485	(54461131)	C	AluSp	SINE/Alu	(5)	308	2	1804900
197	37.8	7.4	0.0	chr19	4182035	4182185	(54435431)	+	L2	LINE/L2	2786	2948	(471)	1804965
18	23.8	1.8	1.8	chr19	4402651	4402706	(54214910)	+	(GCG)n	Simple_repeat	1	57	(0)	1805516
1294	11.9	0.0	1.6	chr19	4610842	4611026	(54006590)	+	AluSx1	SINE/Alu	130	311	(1)	1806006
48	35.0	1.5	0.5	chr19	4611034	4611239	(54006377)	+	GA-rich	Low_complexity	1	209	(0)	1806007
690	15.4	0.0	0.4	chr19	4634300	4634427	(53983189)	+	FLAM_C	SINE/Alu	1	220	(82)	1806075
269	28.6	6.2	6.7	chr19	4634322	4634516	(53983100)	C	SVA_A	Retroposon/SVA	(1193)	194	1	1806076
1028	27.9	12.4	0.9	chr19	4870078	4870316	(53747300)	C	L2a	LINE/L2	(240)	3186	2935	1806723
194	18.4	9.3	0.0	chr19	4870318	4870366	(53747250)	C	MIR1_Amn	SINE/MIR	(105)	125	72	1806725
117	23.4	1.5	0.7	chr19	5090347	5090620	(53526996)	+	(TC)n	Simple_repeat	1	278	(0)	1807183
39	10.8	1.7	0.0	chr19	5246885	5246944	(53370672)	+	(GA)n	Simple_repeat	1	61	(0)	1807483
12	31.1	3.2	1.5	chr19	5247028	5247090	(53370526)	+	GA-rich	Low_complexity	1	65	(0)	1807484
365	38.8	3.4	8.2	chr19	5682026	5682732	(52934884)	C	L2	LINE/L2	(391)	3028	2357	1808578
257	25.9	10.3	4.1	chr19	5718927	5719071	(52898545)	+	L2a	LINE/L2	3174	3328	(98)	1808640
2044	16.7	0.0	0.0	chr19	5798800	5799099	(52818517)	C	AluJb	SINE/Alu	(12)	300	1	1808878
27	35.1	0.7	3.5	chr19	5799137	5799278	(52818338)	+	(TC)n	Simple_repeat	1	143	(0)	1808879
1338	18.3	5.1	7.0	chr19	6080046	6080202	(52537414)	C	AluJr4	SINE/Alu	(17)	295	134	1809374
44	2.4	0.0	0.0	chr19	6080203	6080244	(52537372)	+	(TG)n	Simple_repeat	1	42	(0)	1809375
1338	18.3	5.1	7.0	chr19	6080245	6080387	(52537229)	C	AluJr4	SINE/Alu	(180)	132	1	1809374
406	35.5	7.1	4.0	chr19	6080388	6080716	(52536900)	C	L2a	LINE/L2	(62)	3364	3017	1809373
24	10.5	4.9	0.0	chr19	6481461	6481501	(52136115)	+	GA-rich	Low_complexity	1	43	(0)	1810341
12	5.9	10.3	4.7	chr19	6516896	6516934	(52100682)	+	(TCCCGCTC)n	Simple_repeat	1	43	(0)	1810457
70	15.2	3.7	2.4	chr19	6530094	6530254	(52087362)	+	(ACAGAG)n	Simple_repeat	1	167	(0)	1810496
260	20.9	4.5	5.4	chr19	6530257	6530479	(52087137)	+	HERVIP10FH-int	LTR/ERV1	778	998	(4104)	1810497
50	18.0	6.4	2.4	chr19	6530484	6530640	(52086976)	+	(AGACAG)n	Simple_repeat	1	167	(0)	1810498
192	26.3	1.3	5.9	chr19	6586929	6587548	(52030068)	+	GA-rich	Low_complexity	110	754	(0)	1810652
2203	22.3	7.1	1.3	chr19	6587557	6587714	(52029902)	+	MER54A	LTR/ERVL	334	512	(389)	1810655
350	28.7	5.3	12.2	chr19	6588668	6588953	(52028663)	+	L2a	LINE/L2	3161	3425	(1)	1810657
174	31.0	3.4	0.7	chr19	6589090	6589379	(52028237)	+	(CT)n	Simple_repeat	1	299	(0)	1810658
5771	7.8	2.6	1.6	chr19	6597886	6598689	(52018927)	+	Harlequin-int	LTR/ERV1	263	1074	(5822)	1810679
8875	7.3	1.3	2.4	chr19	6598673	6599985	(52017631)	+	Harlequin-int	LTR/ERV1	1400	2698	(4198)	1810679
1880	9.5	7.4	0.0	chr19	6602481	6602744	(52014872)	+	AluSx1	SINE/Alu	2	286	(26)	1810684
2790	16.8	7.4	7.8	chr19	6602745	6602943	(52014673)	+	LTR9	LTR/ERV1	302	494	(118)	1810683
2235	10.8	0.0	1.6	chr19	6602944	6603248	(52014368)	C	AluSx	SINE/Alu	(12)	300	1	1810685
7709	6.2	2.7	1.4	chr19	6632725	6633718	(51983898)	C	LTR13	LTR/ERVK	(0)	1007	1	1810765
328	19.7	1.1	0.6	chr19	6709963	6710622	(51906994)	+	GA-rich	Low_complexity	1	667	(0)	1810972
31	8.3	2.0	0.0	chr19	7197322	7197372	(51420244)	+	(GAGT)n	Simple_repeat	1	52	(0)	1812249
82	30.6	1.8	0.3	chr19	7197505	7197782	(51419834)	+	(GT)n	Simple_repeat	1	283	(0)	1812250
41	12.2	0.0	0.0	chr19	7197803	7197864	(51419752)	+	(AG)n	Simple_repeat	1	62	(0)	1812251
40	22.6	1.3	0.7	chr19	7197919	7198077	(51419539)	+	(GT)n	Simple_repeat	1	160	(0)	1812252
2276	9.5	0.0	0.0	chr19	7385492	7385775	(51231841)	C	AluSx1	SINE/Alu	(28)	284	1	1812810
1020	18.8	0.0	6.1	chr19	7385800	7385823	(51231793)	C	AluJr	SINE/Alu	(19)	293	271	1812811
142	10.9	0.5	0.0	chr19	7385824	7386046	(51231570)	+	(TC)n	Simple_repeat	1	224	(0)	1812812
1020	18.8	0.0	6.1	chr19	7386047	7386234	(51231382)	C	AluJr	SINE/Alu	(42)	270	94	1812811
18	15.0	0.0	0.0	chr19	7386235	7386264	(51231352)	+	A-rich	Low_complexity	1	30	(0)	1812813
17	13.4	7.8	1.8	chr19	7904076	7904126	(50713490)	+	G-rich	Low_complexity	1	55	(0)	1813952
13	26.6	2.9	4.3	chr19	7904129	7904196	(50713420)	+	(GCCCC)n	Simple_repeat	1	70	(0)	1813953
347	10.4	0.0	0.0	chr19	8032731	8032778	(50584838)	+	Alu	SINE/Alu	1	48	(85)	1814221
3817	11.9	1.4	6.8	chr19	8032779	8032928	(50584688)	C	LTR19B	LTR/ERV1	(0)	580	441	1814222
2238	9.9	2.9	0.3	chr19	8032929	8033231	(50584385)	C	AluSq2	SINE/Alu	(2)	311	1	1814223
3817	11.9	1.4	6.8	chr19	8033232	8033694	(50583922)	C	LTR19B	LTR/ERV1	(140)	440	1	1814222
913	11.7	1.9	7.2	chr19	8033696	8033861	(50583755)	C	HERVFH19-int	LTR/ERV1	(1)	7718	7562	1814222
1748	16.3	2.4	1.7	chr19	8160056	8160343	(50457273)	+	AluJr	SINE/Alu	1	290	(22)	1814547
417	32.6	7.8	10.5	chr19	8160344	8160428	(50457188)	C	L1MC5	LINE/L1	(2251)	7053	6972	1814546
59	1.9	0.0	0.0	chr19	8160429	8160483	(50457133)	+	(TC)n	Simple_repeat	1	55	(0)	1814548
417	32.6	7.8	10.5	chr19	8160484	8160498	(50457118)	C	L1MC5	LINE/L1	(2333)	6971	6957	1814546
18	0.0	0.0	0.0	chr19	8160499	8160516	(50457100)	+	(TA)n	Simple_repeat	1	18	(0)	1814549
2204	8.6	0.4	0.0	chr19	8160517	8160821	(50456795)	C	AluSc	SINE/Alu	(0)	309	1	1814550
2010	12.9	1.3	3.0	chr19	8350643	8350944	(50266672)	+	AluSz6	SINE/Alu	6	302	(10)	1815096
27	3.2	0.0	0.0	chr19	8350992	8351023	(50266593)	+	(GT)n	Simple_repeat	1	32	(0)	1815097
39	2.7	0.0	0.0	chr19	8351024	8351061	(50266555)	+	(GA)n	Simple_repeat	1	38	(0)	1815098
1735	12.9	0.0	2.0	chr19	8351088	8351215	(50266401)	+	AluSz	SINE/Alu	9	135	(177)	1815099
2544	5.7	0.0	0.0	chr19	8351216	8351513	(50266103)	+	AluY	SINE/Alu	1	298	(13)	1815100
1656	22.1	9.4	3.3	chr19	8444388	8444606	(50173010)	C	Charlie12	DNA/hAT-Charlie	(2573)	300	59	1815348
200	26.9	8.2	0.0	chr19	8518214	8518291	(50099325)	C	L2a	LINE/L2	(2102)	1317	1233	1815456
17	4.9	0.0	0.0	chr19	8518320	8518340	(50099276)	+	(CT)n	Simple_repeat	1	21	(0)	1815465
41	0.0	0.0	0.0	chr19	8518341	8518375	(50099241)	+	(TG)n	Simple_repeat	1	35	(0)	1815466
2079	11.4	0.4	0.0	chr19	8518379	8518651	(50098965)	C	AluSz	SINE/Alu	(37)	275	2	1815467
2379	7.5	0.0	0.0	chr19	8526047	8526341	(50091275)	+	AluSg4	SINE/Alu	1	295	(15)	1815490
16	17.0	0.0	5.4	chr19	8526342	8526366	(50091250)	+	(TC)n	Simple_repeat	2	25	(0)	1815491
2128	10.7	0.4	0.0	chr19	8553592	8553872	(50063744)	+	AluSx1	SINE/Alu	2	283	(29)	1815567
654	27.0	7.5	15.6	chr19	8553873	8553894	(50063722)	C	L2a	LINE/L2	(106)	3320	3320	1815566
47	4.0	0.0	1.9	chr19	8553895	8553948	(50063668)	+	(CT)n	Simple_repeat	1	54	(0)	1815568
654	27.0	7.5	15.6	chr19	8553949	8553973	(50063643)	C	L2a	LINE/L2	(106)	3320	3308	1815566
1818	14.8	1.4	1.4	chr19	8553974	8554256	(50063360)	C	AluJr	SINE/Alu	(29)	283	1	1815569
1249	23.6	5.8	7.9	chr19	8652402	8652787	(49964829)	+	MER97b	DNA/hAT-Tip100	583	956	(93)	1815837
68	22.2	1.0	5.0	chr19	8652788	8652909	(49964707)	+	(TTTC)n	Simple_repeat	1	117	(0)	1815839
34	5.0	2.4	0.0	chr19	8652910	8652951	(49964665)	+	(TC)n	Simple_repeat	1	43	(0)	1815840
68	22.2	1.0	5.0	chr19	8652952	8653028	(49964588)	+	(TTTC)n	Simple_repeat	2	76	(0)	1815841
53	0.0	0.0	0.0	chr19	8653039	8653083	(49964533)	+	(TC)n	Simple_repeat	1	45	(0)	1815842
49	0.0	0.0	0.0	chr19	8694854	8694895	(49922721)	+	(AG)n	Simple_repeat	1	42	(0)	1815951
1933	14.7	0.0	0.7	chr19	8694953	8695238	(49922378)	+	AluJb	SINE/Alu	1	284	(28)	1815952
2045	10.8	0.0	0.0	chr19	9006932	9007217	(49610399)	+	AluSz	SINE/Alu	1	286	(26)	1816496
27	8.2	0.0	0.0	chr19	9007218	9007248	(49610368)	+	(CA)n	Simple_repeat	1	31	(0)	1816497
63	0.0	0.0	0.0	chr19	9007249	9007302	(49610314)	+	(AG)n	Simple_repeat	1	54	(0)	1816498
2526	7.2	0.0	0.0	chr19	9948326	9948630	(48668986)	+	AluYk3	SINE/Alu	1	305	(6)	1818531
327	27.0	4.3	9.2	chr19	9948631	9948701	(48668915)	+	L1M5	LINE/L1	5697	5772	(470)	1818527
255	19.1	0.0	0.0	chr19	9948725	9948766	(48668850)	+	AluJo	SINE/Alu	241	282	(30)	1818532
52	2.1	0.0	0.0	chr19	9948767	9948815	(48668801)	+	(AG)n	Simple_repeat	1	49	(0)	1818533
365	31.2	3.4	2.3	chr19	9948816	9948989	(48668627)	+	L1ME3C	LINE/L1	5831	6006	(117)	1818534
1035	20.1	0.0	5.0	chr19	10076070	10076232	(48541384)	+	AluJr	SINE/Alu	137	292	(20)	1818835
44	4.4	0.0	0.0	chr19	10076233	10076279	(48541337)	+	(AG)n	Simple_repeat	1	47	(0)	1818837
1772	16.7	2.8	0.4	chr19	10076280	10076560	(48541056)	+	AluJb	SINE/Alu	3	290	(22)	1818838
255	32.3	5.7	2.0	chr19	10270728	10270828	(48346788)	+	MIR	SINE/MIR	117	221	(41)	1819334
13	8.5	4.0	0.0	chr19	10419324	10419348	(48198268)	+	(CGCT)n	Simple_repeat	1	26	(0)	1819691
1832	20.1	0.0	1.9	chr19	10428070	10428387	(48189229)	+	AluJo	SINE/Alu	1	312	(0)	1819713
22	10.1	0.0	0.0	chr19	10428388	10428419	(48189197)	+	(GA)n	Simple_repeat	1	32	(0)	1819714
20	10.4	0.0	0.0	chr19	10428472	10428503	(48189113)	+	(ATC)n	Simple_repeat	1	32	(0)	1819715
183	27.4	4.6	1.6	chr19	10428504	10428566	(48189050)	+	L2a	LINE/L2	3354	3418	(8)	1819716
17	17.3	6.2	4.3	chr19	10431873	10431937	(48185679)	+	(GTCTCT)n	Simple_repeat	1	69	(0)	1819724
198	10.3	0.0	0.0	chr19	10553511	10553539	(48064077)	+	MIRc	SINE/MIR	120	148	(120)	1820082
1841	13.2	6.5	0.0	chr19	10553568	10553839	(48063777)	C	AluJo	SINE/Alu	(4)	308	18	1820083
1805	16.7	0.3	1.7	chr19	10935812	10936104	(47681512)	C	AluJb	SINE/Alu	(23)	289	1	1821036
304	22.9	0.0	0.0	chr19	11384508	11384568	(47233048)	+	MIRc	SINE/MIR	85	145	(123)	1822184
42	0.0	0.0	0.0	chr19	11384668	11384703	(47232913)	+	(TC)n	Simple_repeat	1	36	(0)	1822185
66	3.0	0.0	0.0	chr19	11384706	11384773	(47232843)	+	(TTCC)n	Simple_repeat	1	68	(0)	1822186
809	20.9	20.0	0.4	chr19	11384792	11385023	(47232593)	C	AluJb	SINE/Alu	(34)	278	1	1822187
494	32.7	10.2	0.3	chr19	11482871	11483152	(47134464)	+	L2a	LINE/L2	2967	3279	(147)	1822442
2174	12.0	0.0	0.0	chr19	11560133	11560441	(47057175)	C	AluSz	SINE/Alu	(3)	309	1	1822651
225	31.5	3.0	5.8	chr19	11560452	11560589	(47057027)	C	L2-3_Crp	LINE/L2	(1191)	905	772	1822652
379	11.8	0.0	0.0	chr19	11560628	11560678	(47056938)	C	Tigger5b	DNA/TcMar-Tigger	(0)	472	422	1822653
1503	14.5	6.8	7.3	chr19	11693948	11694290	(46923326)	+	THE1D	LTR/ERVL-MaLR	41	381	(0)	1822952
27	0.0	0.0	0.0	chr19	12401542	12401567	(46216049)	+	(T)n	Simple_repeat	1	26	(0)	1824374
36	0.0	0.0	0.0	chr19	12401570	12401600	(46216016)	+	(GA)n	Simple_repeat	1	31	(0)	1824375
2029	8.1	2.5	1.8	chr19	12401601	12401872	(46215744)	C	AluSg	SINE/Alu	(35)	275	2	1824376
35	16.1	1.2	3.6	chr19	12789151	12789174	(45828442)	+	(CAGAGA)n	Simple_repeat	1	81	(0)	1825215
40	9.5	0.0	0.0	chr19	12789175	12789230	(45828386)	+	(GA)n	Simple_repeat	1	56	(0)	1825216
1383	11.8	4.5	14.5	chr19	12919616	12919786	(45697830)	C	AluJb	SINE/Alu	(15)	297	131	1825530
180	32.0	2.5	2.7	chr19	12982553	12982915	(45634701)	+	(TC)n	Simple_repeat	1	360	(0)	1825702
2066	11.9	0.3	0.3	chr19	12982916	12983201	(45634415)	C	AluSc	SINE/Alu	(0)	309	24	1825703
40	6.6	0.0	0.0	chr19	13023061	13023108	(45594508)	+	(TC)n	Simple_repeat	1	48	(0)	1825767
29	23.1	1.2	2.3	chr19	13023271	13023355	(45594261)	+	(CCCT)n	Simple_repeat	1	86	(0)	1825770
15	10.0	0.0	0.0	chr19	13096203	13096224	(45521392)	+	(CT)n	Simple_repeat	1	22	(0)	1825864
17	9.3	0.0	7.5	chr19	13096354	13096393	(45521223)	+	GA-rich	Low_complexity	1	40	(0)	1825865
14	15.2	2.4	4.8	chr19	13098243	13098283	(45519333)	+	(CACCC)n	Simple_repeat	1	42	(0)	1825871
212	14.3	2.5	1.7	chr19	13618869	13619167	(44998449)	+	GA-rich	Low_complexity	70	418	(0)	1827287
39	2.7	0.0	0.0	chr19	13619281	13619318	(44998298)	+	(TC)n	Simple_repeat	1	38	(0)	1827289
15	32.9	0.0	0.0	chr19	14090475	14090531	(44527085)	+	(CCC)n	Simple_repeat	1	57	(0)	1828548
18	0.0	0.0	0.0	chr19	14090582	14090601	(44527015)	+	(A)n	Simple_repeat	1	20	(0)	1828549
32	17.2	1.7	0.0	chr19	14090601	14090660	(44526956)	+	GA-rich	Low_complexity	1	61	(0)	1828550
15	21.8	0.0	0.0	chr19	14090671	14090707	(44526909)	+	(CACA)n	Simple_repeat	1	37	(0)	1828551
20	12.7	2.1	4.2	chr19	14090762	14090808	(44526808)	+	(CGC)n	Simple_repeat	1	48	(0)	1828552
42	7.1	1.7	0.0	chr19	14166546	14166604	(44451012)	+	(AG)n	Simple_repeat	1	60	(0)	1828723
62	14.5	0.0	0.0	chr19	14204663	14204768	(44412848)	+	(AGAG)n	Simple_repeat	1	106	(0)	1828818
44	23.5	1.8	0.9	chr19	14776180	14776291	(43841325)	+	GA-rich	Low_complexity	1	114	(0)	1830352
7106	9.6	2.3	1.2	chr19	14888380	14889322	(43728294)	C	LTR13_	LTR/ERVK	(0)	954	1	1830565
29	7.5	0.0	2.2	chr19	15049670	15049697	(43567919)	+	(CT)n	Simple_repeat	1	28	(0)	1830962
46	4.3	0.0	0.0	chr19	15049698	15049745	(43567871)	+	(CA)n	Simple_repeat	1	48	(0)	1830963
29	7.5	0.0	2.2	chr19	15049746	15049761	(43567855)	+	(CT)n	Simple_repeat	1	15	(0)	1830964
239	36.6	5.6	6.1	chr19	15049850	15050047	(43567569)	C	L2b	LINE/L2	(0)	3375	3179	1830965
1305	19.7	1.0	7.6	chr19	15169078	15169186	(43448430)	+	MLT1B	LTR/ERVL-MaLR	82	188	(202)	1831279
51	0.0	0.0	0.0	chr19	15169187	15169230	(43448386)	+	(TC)n	Simple_repeat	1	44	(0)	1831280
1305	19.7	1.0	7.6	chr19	15169231	15169409	(43448207)	+	MLT1B	LTR/ERVL-MaLR	189	349	(41)	1831279
190	24.0	3.6	0.4	chr19	15813415	15813937	(42803679)	+	GA-rich	Low_complexity	1	542	(0)	1832562
12	11.6	4.7	6.7	chr19	16111699	16111741	(42505875)	+	(GCGCTCC)n	Simple_repeat	1	45	(0)	1833149
601	23.6	9.0	1.2	chr19	16890644	16890806	(41726810)	+	MLT1C	LTR/ERVL-MaLR	6	182	(285)	1835018
1078	8.7	0.0	0.0	chr19	17394822	17394959	(41222657)	C	FLAM_C	SINE/Alu	(5)	138	1	1836216
8077	5.9	1.0	0.8	chr19	17407241	17408245	(41209371)	C	LTR13	LTR/ERVK	(0)	1007	1	1836250
2596	19.1	4.2	6.1	chr19	17418829	17419385	(41198231)	+	LTR75_1	LTR/ERV1	1	546	(0)	1836292
659	12.6	0.0	11.0	chr19	17419386	17419409	(41198207)	C	FLAM_A	SINE/Alu	(104)	38	20	1836291
997	7.9	0.0	0.0	chr19	17419595	17419721	(41197895)	C	AluSc	SINE/Alu	(182)	127	1	1836293
2220	10.3	0.3	0.0	chr19	17466988	17467278	(41150338)	+	AluSz	SINE/Alu	1	292	(20)	1836438
59	1.9	0.0	0.0	chr19	17467279	17467333	(41150283)	+	(AG)n	Simple_repeat	1	55	(0)	1836439
18	10.5	0.0	0.0	chr19	17467335	17467365	(41150251)	+	(AGAA)n	Simple_repeat	1	31	(0)	1836440
941	13.2	7.3	0.0	chr19	17467366	17467517	(41150099)	+	MER39B	LTR/ERV1	14	177	(476)	1836441
2046	13.2	1.0	0.0	chr19	17467518	17467812	(41149804)	+	AluSz	SINE/Alu	1	298	(14)	1836442
8254	6.2	0.4	0.5	chr19	17545353	17546360	(41071256)	C	LTR13	LTR/ERVK	(0)	1007	1	1836661
1686	12.9	3.2	0.0	chr19	17715818	17716057	(40901559)	+	AluSx1	SINE/Alu	1	248	(64)	1837091
29	0.0	0.0	0.0	chr19	17716061	17716085	(40901531)	+	(AG)n	Simple_repeat	1	25	(0)	1837092
1645	15.7	5.5	1.9	chr19	17716086	17716347	(40901269)	C	AluSx1	SINE/Alu	(40)	272	1	1837093
2105	13.6	0.0	1.6	chr19	17892355	17892652	(40724964)	+	AluSx	SINE/Alu	2	296	(16)	1837549
54	0.0	0.0	0.0	chr19	17892653	17892698	(40724918)	+	(AG)n	Simple_repeat	1	46	(0)	1837550
2105	13.6	0.0	1.6	chr19	17892699	17892715	(40724901)	+	AluSx	SINE/Alu	297	312	(0)	1837549
231	28.9	11.7	2.3	chr19	17892732	17892862	(40724754)	C	L2a	LINE/L2	(150)	3237	3093	1837541
223	33.6	0.0	3.4	chr19	18098250	18098366	(40519250)	C	MIRb	SINE/MIR	(72)	196	84	1838097
181	32.4	4.3	1.8	chr19	18224033	18224145	(40393471)	+	L2c	LINE/L2	3005	3120	(267)	1838407
18	20.6	3.8	6.1	chr19	18291608	18291686	(40325930)	+	(CTTCCCG)n	Simple_repeat	1	82	(0)	1838553
588	31.3	6.9	7.6	chr19	18390227	18390593	(40227023)	C	L2b	LINE/L2	(19)	3356	2993	1838796
297	31.2	5.3	0.0	chr19	18390725	18390849	(40226767)	+	L2c	LINE/L2	3022	3153	(234)	1838797
230	24.4	0.0	0.0	chr19	18429973	18430017	(40187599)	+	MIRc	SINE/MIR	84	128	(140)	1838881
18	4.2	4.0	0.0	chr19	28502401	28502425	(30115191)	+	(CT)n	Simple_repeat	1	26	(0)	1848879
88	1.3	0.0	0.0	chr19	29447484	29447562	(29170054)	+	(CT)n	Simple_repeat	1	79	(0)	1850258
35	5.4	0.0	0.0	chr19	29661044	29661082	(28956534)	+	(AC)n	Simple_repeat	1	39	(0)	1850594
775	27.7	18.9	0.6	chr19	29687076	29687580	(28930036)	C	L2a	LINE/L2	(952)	2467	1849	1850634
3683	17.6	3.0	2.1	chr19	29687597	29687914	(28929702)	C	L1MB7	LINE/L1	(1)	6183	5876	1850638
63	1.6	1.6	0.0	chr19	30223437	30223498	(28394118)	+	(GA)n	Simple_repeat	1	63	(0)	1851569
43	0.0	0.0	0.0	chr19	30264931	30264967	(28352649)	+	(GT)n	Simple_repeat	1	37	(0)	1851629
18	4.5	0.0	0.0	chr19	30264968	30264990	(28352626)	+	(AG)n	Simple_repeat	1	23	(0)	1851630
78	3.9	0.0	0.0	chr19	30664205	30664284	(27953332)	+	(TC)n	Simple_repeat	1	80	(0)	1852161
31	0.0	0.0	0.0	chr19	30693024	30693050	(27924566)	+	(GA)n	Simple_repeat	1	27	(0)	1852190
1831	16.1	13.3	0.8	chr19	32251981	32252349	(26365267)	+	MSTB	LTR/ERVL-MaLR	1	422	(4)	1854474
65	0.0	0.0	0.0	chr19	32285796	32285850	(26331766)	+	(TC)n	Simple_repeat	1	55	(0)	1854530
269	29.2	5.3	0.0	chr19	32286017	32286105	(26331511)	C	L2a	LINE/L2	(0)	3426	3306	1854531
3207	19.7	11.1	2.2	chr19	32373384	32374169	(26243447)	C	Tigger6a	DNA/TcMar-Tigger	(211)	872	8	1854681
18	0.0	0.0	0.0	chr19	32374170	32374189	(26243427)	+	(AC)n	Simple_repeat	1	20	(0)	1854682
647	28.8	7.2	5.3	chr19	32374202	32374465	(26243151)	C	L1M1	LINE/L1	(1701)	4445	4173	1854683
2125	11.1	0.0	1.7	chr19	32909979	32910266	(25707350)	+	AluSz6	SINE/Alu	1	283	(29)	1855704
47	9.5	0.0	1.4	chr19	32910267	32910329	(25707287)	+	(GA)n	Simple_repeat	1	63	(0)	1855705
5552	12.8	4.8	0.6	chr19	32910330	32911237	(25706379)	C	Tigger3b	DNA/TcMar-Tigger	(283)	948	1	1855706
1573	17.9	1.4	3.4	chr19	33363175	33363465	(25254151)	+	AluJb	SINE/Alu	2	286	(26)	1856677
51	0.0	0.0	0.0	chr19	33363467	33363510	(25254106)	+	(CA)n	Simple_repeat	1	44	(0)	1856678
18	4.8	0.0	0.0	chr19	33363511	33363532	(25254084)	+	(GA)n	Simple_repeat	1	22	(0)	1856679
240	28.7	10.9	5.8	chr19	33368287	33368460	(25249156)	+	MLT1O	LTR/ERVL-MaLR	22	205	(337)	1856689
20	28.3	2.7	0.0	chr19	33368563	33368604	(25249012)	+	(ACAGAG)n	Simple_repeat	1	73	(0)	1856690
23	12.6	0.0	0.0	chr19	33368571	33368605	(25249011)	+	(AC)n	Simple_repeat	1	35	(0)	1856691
22	7.2	0.0	0.0	chr19	33368605	33368633	(25248983)	+	(AG)n	Simple_repeat	1	29	(0)	1856692
234	19.6	1.8	1.8	chr19	33368709	33368765	(25248851)	+	MLT1O	LTR/ERVL-MaLR	482	538	(4)	1856693
1456	17.0	3.5	6.1	chr19	34160426	34160719	(24456897)	+	AluJb	SINE/Alu	1	286	(26)	1858047
1826	17.1	1.1	10.9	chr19	34160720	34160730	(24456886)	+	MLT1A0	LTR/ERVL-MaLR	153	153	(212)	1858045
2257	11.0	0.0	0.0	chr19	34160731	34161020	(24456596)	+	AluSz	SINE/Alu	1	290	(22)	1858048
1857	16.2	1.7	0.3	chr19	34225789	34226085	(24391531)	+	AluJo	SINE/Alu	7	307	(5)	1858189
21	25.2	4.8	0.0	chr19	34226314	34226396	(24391220)	+	(CT)n	Simple_repeat	1	86	(0)	1858190
22	7.4	0.0	0.0	chr19	34226370	34226398	(24391218)	+	(T)n	Simple_repeat	1	29	(0)	1858191
2717	21.5	4.9	1.5	chr19	34722491	34722849	(23894767)	+	HERVS71-int	LTR/ERV1	4	481	(8497)	1859045
46	10.3	1.4	0.0	chr19	34722850	34722923	(23894693)	+	(TC)n	Simple_repeat	1	75	(0)	1859046
2717	15.3	3.4	2.4	chr19	34722924	34723282	(23894334)	+	HERVS71-int	LTR/ERV1	482	849	(8129)	1859045
17	29.1	3.1	1.5	chr19	35000120	35000184	(23617432)	+	(TC)n	Simple_repeat	1	67	(0)	1859480
37	28.6	2.4	0.8	chr19	35031335	35031458	(23586158)	+	GA-rich	Low_complexity	1	127	(0)	1859553
17	16.9	0.0	0.0	chr19	35152162	35152195	(23465421)	+	GA-rich	Low_complexity	1	34	(0)	1859828
4376	7.0	1.3	0.0	chr19	35204673	35205219	(23412397)	C	MER41A	LTR/ERV1	(0)	554	1	1859931
555	25.1	10.3	1.4	chr19	35205270	35205548	(23412068)	C	L2b	LINE/L2	(195)	3231	2931	1859932
2146	22.8	5.2	2.1	chr19	35430411	35430934	(23186682)	+	MER87	LTR/ERV1	1	541	(0)	1860397
20	7.0	3.3	0.0	chr19	35430951	35430986	(23186630)	+	(AG)n	Simple_repeat	1	37	(0)	1860398
689	28.1	3.0	10.5	chr19	35431154	35431681	(23185935)	+	L2b	LINE/L2	2811	3294	(81)	1860399
806	16.8	0.0	0.0	chr19	35655637	35655755	(22961861)	C	FLAM_A	SINE/Alu	(21)	121	3	1860862
54	11.1	1.0	1.0	chr19	35655756	35655854	(22961762)	+	(TC)n	Simple_repeat	1	100	(0)	1860863
1554	15.7	12.3	1.5	chr19	35655855	35656128	(22961488)	C	AluJo	SINE/Alu	(3)	309	2	1860864
1771	16.0	0.0	0.8	chr19	35844987	35845254	(22772362)	+	AluJo	SINE/Alu	2	267	(45)	1861303
19	19.8	1.1	1.1	chr19	35845256	35845300	(22772316)	+	A-rich	Low_complexity	1	45	(0)	1861304
302	22.9	12.9	0.0	chr19	38433365	38433486	(20184130)	+	MIRb	SINE/MIR	36	173	(95)	1866650
21	10.8	0.0	0.0	chr19	38728067	38728097	(19889519)	+	(CT)n	Simple_repeat	1	31	(0)	1867310
288	35.9	6.5	0.0	chr19	39139891	39140035	(19477581)	C	MIR	SINE/MIR	(0)	262	108	1868366
580	22.6	4.2	1.4	chr19	39251849	39251987	(19365629)	C	MIR	SINE/MIR	(99)	163	21	1868665
24	21.5	3.4	0.0	chr19	39252018	39252076	(19365540)	+	(TC)n	Simple_repeat	1	61	(0)	1868666
301	24.5	4.7	0.0	chr19	39252179	39252280	(19365336)	C	L1ME4a	LINE/L1	(1)	6123	6017	1868667
59	26.4	3.4	1.4	chr19	39894698	39894905	(18722711)	+	(TCTC)n	Simple_repeat	1	215	(0)	1869845
2104	12.7	0.0	0.0	chr19	40120466	40120749	(18496867)	+	AluSx	SINE/Alu	1	284	(28)	1870257
62	2.9	2.8	0.0	chr19	40120750	40120821	(18496795)	+	(AAATG)n	Simple_repeat	1	74	(0)	1870258
2040	15.3	16.5	5.5	chr19	40120822	40120851	(18496765)	C	LTR54	LTR/ERV1	(312)	198	170	1870256
56	2.0	0.0	0.0	chr19	40120852	40120903	(18496713)	+	(TC)n	Simple_repeat	1	52	(0)	1870259
2040	15.3	16.5	5.5	chr19	40120904	40121062	(18496554)	C	LTR54	LTR/ERV1	(341)	169	3	1870256
34	26.5	3.0	2.2	chr19	40417083	40417213	(18200403)	+	(TCTC)n	Simple_repeat	1	135	(0)	1870999
12	17.0	2.9	2.8	chr19	40446172	40446206	(18171410)	+	(TAGG)n	Simple_repeat	1	36	(0)	1871083
526	15.3	1.2	0.0	chr19	40446381	40446465	(18171151)	C	AluSx3	SINE/Alu	(19)	292	207	1871084
491	26.6	5.9	2.0	chr19	40463125	40463270	(18154346)	C	MIRb	SINE/MIR	(84)	184	33	1871144
483	29.3	6.9	2.6	chr19	40463283	40463475	(18154141)	C	MIR	SINE/MIR	(43)	219	18	1871145
15	25.0	0.0	2.0	chr19	40663310	40663358	(17954258)	+	G-rich	Low_complexity	1	49	(0)	1871651
397	32.2	6.5	7.8	chr19	40751530	40751903	(17865713)	+	L2b	LINE/L2	2957	3325	(50)	1871866
490	24.7	4.1	6.9	chr19	40751935	40752051	(17865565)	C	MIR	SINE/MIR	(29)	233	124	1871867
151	0.0	4.0	0.0	chr19	40848941	40849089	(17768527)	+	(AG)n	Simple_repeat	1	155	(0)	1872082
12	20.7	4.8	6.1	chr19	40849183	40849245	(17768371)	+	GA-rich	Low_complexity	1	66	(0)	1872083
2098	11.3	4.5	11.2	chr19	40926162	40926571	(17691045)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1872245
19	26.5	4.7	2.2	chr19	40941493	40941578	(17676038)	+	G-rich	Low_complexity	1	90	(0)	1872280
35	0.0	0.0	0.0	chr19	41378824	41378853	(17238763)	+	(GA)n	Simple_repeat	1	30	(0)	1873298
1982	14.3	0.0	0.7	chr19	41378854	41379133	(17238483)	C	AluJb	SINE/Alu	(34)	278	1	1873299
26	27.7	5.2	1.6	chr19	41427886	41428001	(17189615)	+	GA-rich	Low_complexity	1	122	(0)	1873413
384	28.6	15.4	0.9	chr19	41843209	41843428	(16774188)	+	MIRc	SINE/MIR	6	257	(5)	1874029
13	27.0	0.0	2.2	chr19	41843448	41843493	(16774123)	+	(TCCC)n	Simple_repeat	1	46	(0)	1874030
13	16.0	5.7	0.0	chr19	41957982	41958016	(16659600)	+	GA-rich	Low_complexity	1	37	(0)	1874252
815	14.4	1.7	0.0	chr19	42182125	42182242	(16435374)	+	AluSz6	SINE/Alu	166	285	(27)	1874749
46	0.0	0.0	0.0	chr19	42182243	42182281	(16435335)	+	(AG)n	Simple_repeat	1	39	(0)	1874750
12	12.8	5.6	2.6	chr19	42325733	42325768	(16291848)	+	(GCTCCC)n	Simple_repeat	1	38	(0)	1875034
6451	20.2	2.2	1.9	chr19	42791493	42793683	(15823933)	C	HUERS-P3b-int	LTR/ERV1	(5635)	3284	747	1875789
1328	26.0	1.3	1.6	chr19	42793712	42794024	(15823592)	C	HUERS-P3b-int	LTR/ERV1	(8348)	571	260	1875789
6389	20.7	2.1	1.6	chr19	43102282	43104470	(15513146)	C	HUERS-P3b-int	LTR/ERV1	(5635)	3284	747	1876233
1418	24.4	1.6	1.6	chr19	43104491	43104802	(15512814)	C	HUERS-P3b-int	LTR/ERV1	(8348)	571	260	1876233
6538	19.7	2.2	1.8	chr19	43227347	43229535	(15388081)	C	HUERS-P3b-int	LTR/ERV1	(5635)	3284	746	1876408
1473	23.4	1.3	1.6	chr19	43229563	43229871	(15387745)	C	HUERS-P3b-int	LTR/ERV1	(8348)	571	264	1876408
389	23.7	5.2	2.3	chr19	43669362	43669490	(14948126)	+	MIR	SINE/MIR	58	183	(79)	1877377
314	24.8	16.9	0.0	chr19	43670360	43670472	(14947144)	+	MIR	SINE/MIR	17	152	(110)	1877380
287	21.4	13.2	0.0	chr19	43670480	43670591	(14947025)	+	L1MC5a	LINE/L1	2446	2574	(203)	1877381
89	30.6	0.0	0.0	chr19	43676039	43676272	(14941344)	+	(TG)n	Simple_repeat	1	234	(0)	1877401
660	6.8	3.8	0.4	chr19	43784735	43785133	(14832483)	C	MSR1	Satellite	(40)	412	1	1877665
236	31.6	3.9	2.0	chr19	44578187	44578286	(14039330)	+	MIR	SINE/MIR	14	115	(147)	1879028
68	0.0	3.1	0.0	chr19	44578292	44578356	(14039260)	+	(TC)n	Simple_repeat	1	67	(0)	1879029
2089	12.2	0.3	0.7	chr19	44578360	44578645	(14038971)	C	AluSx3	SINE/Alu	(26)	285	1	1879030
350	31.6	14.6	2.2	chr19	44642439	44642530	(13975086)	+	L2a	LINE/L2	3020	3123	(252)	1879197
54	6.3	0.0	1.4	chr19	44642531	44642599	(13975017)	+	(TC)n	Simple_repeat	1	69	(0)	1879198
711	27.3	7.1	0.5	chr19	44642600	44642817	(13974799)	+	L2a	LINE/L2	3124	3426	(0)	1879197
1414	28.8	5.8	4.0	chr19	44676916	44677417	(13940199)	C	MLT1K	LTR/ERVL-MaLR	(72)	523	11	1879304
43	0.0	4.5	0.0	chr19	44677433	44677476	(13940140)	+	(GA)n	Simple_repeat	1	46	(0)	1879306
198	34.5	9.8	2.9	chr19	44677495	44677664	(13939952)	C	L3	LINE/CR1	(176)	3923	3741	1879307
240	32.2	5.9	0.0	chr19	44682845	44682987	(13934629)	C	MIR3	SINE/MIR	(54)	154	3	1879323
34	0.0	0.0	0.0	chr19	44683056	44683084	(13934532)	+	(CT)n	Simple_repeat	1	29	(0)	1879324
678	9.0	12.3	0.0	chr19	44845398	44845497	(13772119)	+	AluJr	SINE/Alu	1	114	(198)	1879786
22	33.3	0.0	1.2	chr19	44845597	44845676	(13771940)	+	GA-rich	Low_complexity	1	80	(0)	1879787
56	25.0	4.0	1.1	chr19	44848657	44848829	(13768787)	+	(CT)n	Simple_repeat	1	180	(0)	1879792
246	27.1	9.3	5.4	chr19	45078897	45079070	(13538546)	+	MIRc	SINE/MIR	2	174	(94)	1880412
2362	7.7	1.3	1.9	chr19	45450488	45450799	(13166817)	+	AluSx	SINE/Alu	1	310	(2)	1881347
2360	10.1	0.0	1.3	chr19	45863559	45863874	(12753742)	C	AluSz	SINE/Alu	(0)	312	1	1882443
2197	13.8	0.0	0.0	chr19	45875940	45876251	(12741365)	C	AluJr	SINE/Alu	(0)	312	1	1882471
11	18.1	6.3	6.0	chr19	45876293	45876355	(12741261)	+	(TCTGTG)n	Simple_repeat	1	67	(0)	1882472
3157	20.0	3.1	1.3	chr19	46205120	46205748	(12411868)	+	LTR9D	LTR/ERV1	1	641	(4)	1883119
30	0.0	3.5	0.0	chr19	46212714	46212742	(12404874)	+	(TC)n	Simple_repeat	1	30	(0)	1883132
264	35.2	3.0	2.3	chr19	46212743	46212862	(12404754)	+	L2a	LINE/L2	3302	3424	(2)	1883133
18	32.9	0.9	3.8	chr19	47112179	47112283	(11505333)	+	(GAGC)n	Simple_repeat	1	106	(0)	1885277
26	0.0	0.0	0.0	chr19	47226328	47226352	(11391264)	+	(CCCTGG)n	Simple_repeat	1	25	(0)	1885597
27	24.1	0.0	0.0	chr19	47420836	47420911	(11196705)	+	(TCTCTC)n	Simple_repeat	1	76	(0)	1886120
27	0.0	0.0	0.0	chr19	47420911	47420940	(11196676)	+	(CA)n	Simple_repeat	1	30	(0)	1886121
40	0.0	0.0	0.0	chr19	47420941	47420974	(11196642)	+	(CT)n	Simple_repeat	1	34	(0)	1886122
1107	18.1	0.0	0.0	chr19	47452206	47452382	(11165234)	C	AluSc8	SINE/Alu	(3)	308	132	1886192
57	0.0	0.0	0.0	chr19	47452398	47452446	(11165170)	+	(GA)n	Simple_repeat	1	49	(0)	1886193
39	0.0	0.0	0.0	chr19	47452447	47452489	(11165127)	+	(TG)n	Simple_repeat	1	43	(0)	1886194
894	8.8	0.0	0.0	chr19	47452490	47452602	(11165014)	C	AluSx	SINE/Alu	(38)	274	162	1886195
90	29.6	3.1	1.4	chr19	47471043	47471395	(11146221)	+	GA-rich	Low_complexity	1	364	(0)	1886245
949	10.5	0.0	0.0	chr19	47770692	47770815	(10846801)	C	AluSx4	SINE/Alu	(11)	299	176	1887017
1109	9.7	0.0	0.0	chr19	47820335	47820479	(10797137)	+	AluSx3	SINE/Alu	163	307	(4)	1887153
31	0.0	0.0	0.0	chr19	47820515	47820541	(10797075)	+	(AG)n	Simple_repeat	1	27	(0)	1887154
2306	12.2	0.0	0.0	chr19	47891359	47891662	(10725954)	C	AluSz6	SINE/Alu	(8)	304	1	1887339
525	21.1	5.5	3.4	chr19	47891935	47892121	(10725495)	+	MER61E	LTR/ERV1	1	193	(586)	1887340
41	7.3	0.0	0.0	chr19	48029780	48029837	(10587779)	+	(GAGA)n	Simple_repeat	1	58	(0)	1887752
369	17.6	0.0	3.4	chr19	48029965	48030052	(10587564)	C	L1PA16	LINE/L1	(3)	6163	6079	1887753
7404	9.5	1.1	0.6	chr19	48259616	48260614	(10357002)	C	LTR13	LTR/ERVK	(0)	1007	4	1888303
11	34.0	4.2	2.0	chr19	48325359	48325454	(10292162)	+	GA-rich	Low_complexity	1	100	(0)	1888477
45	15.2	0.0	0.0	chr19	48390534	48390613	(10227003)	+	GA-rich	Low_complexity	1	80	(0)	1888646
30	0.0	3.5	0.0	chr19	48425016	48425044	(10192572)	+	(TC)n	Simple_repeat	1	30	(0)	1888729
19	0.0	4.2	0.0	chr19	48555486	48555509	(10062107)	+	(TC)n	Simple_repeat	1	25	(0)	1889047
47	0.0	0.0	0.0	chr19	48555550	48555589	(10062027)	+	(CT)n	Simple_repeat	1	40	(0)	1889048
1323	12.6	0.0	2.1	chr19	48555590	48555741	(10061875)	C	AluSz6	SINE/Alu	(27)	285	137	1889049
901	13.9	0.0	0.7	chr19	48565089	48565225	(10052391)	C	AluSx	SINE/Alu	(176)	136	1	1889079
463	17.2	2.1	0.0	chr19	48565236	48565328	(10052288)	C	L1ME2z	LINE/L1	(179)	6265	6171	1889080
24	6.8	0.0	0.0	chr19	48565336	48565366	(10052250)	+	(GT)n	Simple_repeat	1	31	(0)	1889081
22	10.0	0.0	0.0	chr19	48565366	48565397	(10052219)	+	(GA)n	Simple_repeat	1	32	(0)	1889082
2185	11.0	0.0	0.0	chr19	48565398	48565678	(10051938)	C	AluSx	SINE/Alu	(30)	282	2	1889083
391	33.1	5.3	0.0	chr19	48618825	48618966	(9998650)	+	MIR	SINE/MIR	2	151	(111)	1889229
48	24.7	2.8	5.5	chr19	48646013	48646225	(9971391)	+	(CTCCTCC)n	Simple_repeat	1	219	(0)	1889272
14	21.7	0.0	10.3	chr19	48646681	48646758	(9970858)	+	(GGAGCG)n	Simple_repeat	1	78	(0)	1889273
22	0.0	0.0	0.0	chr19	48655176	48655199	(9962417)	+	(TA)n	Simple_repeat	1	24	(0)	1889302
40	6.3	0.0	0.0	chr19	48655199	48655249	(9962367)	+	(AG)n	Simple_repeat	1	51	(0)	1889303
1925	9.5	0.4	8.2	chr19	48655250	48655418	(9962198)	C	AluSz	SINE/Alu	(30)	282	128	1889304
64	28.7	3.2	1.6	chr19	48868148	48868393	(9749223)	+	(TC)n	Simple_repeat	1	254	(0)	1889821
404	20.0	0.8	6.4	chr19	48868422	48868672	(9748944)	C	HERVIP10FH-int	LTR/ERV1	(4122)	980	744	1889822
7899	7.5	1.4	0.3	chr19	48876222	48877217	(9740399)	C	LTR13	LTR/ERVK	(0)	1007	1	1889840
2355	5.7	0.0	6.3	chr19	48898835	48899165	(9718451)	+	AluY	SINE/Alu	1	310	(1)	1889895
671	13.2	0.8	7.3	chr19	48899228	48899337	(9718279)	+	AluJo	SINE/Alu	1	105	(207)	1889896
1138	16.2	2.1	0.0	chr19	48899753	48899937	(9717679)	+	AluJb	SINE/Alu	120	308	(4)	1889898
15	21.0	1.8	5.4	chr19	48954872	48954926	(9662690)	+	(GGC)n	Simple_repeat	1	56	(0)	1890063
1745	11.7	1.2	0.4	chr19	48967178	48967426	(9650190)	+	AluSp	SINE/Alu	43	293	(20)	1890081
612	13.4	0.0	0.0	chr19	48967440	48967521	(9650095)	+	AluSz6	SINE/Alu	214	295	(17)	1890082
26	11.2	0.0	0.0	chr19	49021405	49021443	(9596173)	+	(GA)n	Simple_repeat	1	39	(0)	1890205
21	7.6	0.0	0.0	chr19	49021443	49021470	(9596146)	+	(GT)n	Simple_repeat	1	28	(0)	1890206
25	8.3	0.0	0.0	chr19	49021536	49021573	(9596043)	+	(AGAG)n	Simple_repeat	1	38	(0)	1890207
24	6.6	0.0	0.0	chr19	49021573	49021604	(9596012)	+	(GT)n	Simple_repeat	1	32	(0)	1890208
18	4.7	0.0	0.0	chr19	49021665	49021686	(9595930)	+	(AG)n	Simple_repeat	1	22	(0)	1890209
20	13.7	0.0	0.0	chr19	49021682	49021713	(9595903)	+	(GT)n	Simple_repeat	1	32	(0)	1890210
7506	7.8	2.1	2.7	chr19	49207760	49208772	(9408844)	C	LTR13	LTR/ERVK	(0)	1007	1	1890609
13	20.9	0.0	0.0	chr19	49335325	49335357	(9282259)	+	GA-rich	Low_complexity	1	33	(0)	1890899
24	24.5	0.0	1.7	chr19	49335423	49335482	(9282134)	+	(CT)n	Simple_repeat	1	60	(0)	1890900
1912	15.9	1.0	1.0	chr19	49398360	49398668	(9218948)	C	AluJo	SINE/Alu	(3)	309	1	1891031
2449	8.6	0.0	0.0	chr19	49408445	49408747	(9208869)	C	AluSc8	SINE/Alu	(8)	303	1	1891051
368	33.8	7.0	1.8	chr19	49422761	49422923	(9194693)	+	L2b	LINE/L2	3204	3375	(0)	1891074
19	11.1	0.0	0.0	chr19	49580287	49580315	(9037301)	+	(AG)n	Simple_repeat	1	29	(0)	1891464
17	0.0	0.0	0.0	chr19	49591092	49591110	(9026506)	+	(T)n	Simple_repeat	1	19	(0)	1891487
19	20.3	0.0	0.0	chr19	49591155	49591199	(9026417)	+	(CCCCGCC)n	Simple_repeat	1	45	(0)	1891488
8282	5.2	1.2	0.4	chr19	49940893	49941891	(8675725)	+	LTR13	LTR/ERVK	1	1007	(0)	1892259
281	28.3	7.6	5.8	chr19	50064304	50064457	(8553159)	+	MLT1K	LTR/ERVL-MaLR	60	216	(379)	1892532
230	35.3	1.5	2.9	chr19	50064652	50064788	(8552828)	+	MLT1K	LTR/ERVL-MaLR	416	550	(45)	1892532
1651	14.1	1.0	5.9	chr19	50206932	50207237	(8410379)	+	AluJo	SINE/Alu	1	291	(21)	1892971
80	2.6	0.0	0.0	chr19	50207238	50207314	(8410302)	+	(AG)n	Simple_repeat	1	77	(0)	1892972
4544	13.5	7.3	1.3	chr19	50367269	50367536	(8250080)	C	L1M1	LINE/L1	(5517)	2048	1756	1893347
60	4.8	0.0	0.0	chr19	50367537	50367601	(8250015)	+	(TC)n	Simple_repeat	1	65	(0)	1893353
4544	13.5	7.3	1.3	chr19	50367602	50367875	(8249741)	C	L1M1	LINE/L1	(5810)	1755	1457	1893347
12	28.1	1.7	3.3	chr19	50500436	50500494	(8117122)	+	(TCCCCC)n	Simple_repeat	1	60	(0)	1893651
16	25.2	0.0	3.6	chr19	50551739	50551800	(8065816)	+	(TGTC)n	Simple_repeat	1	59	(0)	1893769
16	16.9	4.9	0.0	chr19	50551853	50551893	(8065723)	+	(CTCC)n	Simple_repeat	1	43	(0)	1893770
2189	13.5	6.3	4.7	chr19	50741308	50741713	(7875903)	+	LTR46	LTR/ERV1	1	419	(41)	1894213
2204	9.8	0.3	0.0	chr19	50741714	50742020	(7875596)	C	AluSq2	SINE/Alu	(5)	308	1	1894214
1254	18.6	5.2	0.0	chr19	50774176	50774411	(7843205)	+	AluJb	SINE/Alu	37	285	(27)	1894308
18	4.3	0.0	0.0	chr19	50774412	50774432	(7843184)	+	(CT)n	Simple_repeat	2	22	(0)	1894309
18	0.0	0.0	0.0	chr19	50774432	50774451	(7843165)	+	(CA)n	Simple_repeat	1	20	(0)	1894310
34	0.0	0.0	0.0	chr19	50774455	50774483	(7843133)	+	(AG)n	Simple_repeat	1	29	(0)	1894311
27	0.0	0.0	0.0	chr19	50777241	50777266	(7840350)	+	(TTAA)n	Simple_repeat	1	26	(0)	1894319
1477	17.7	7.7	0.0	chr19	50777267	50777390	(7840226)	C	AluJo	SINE/Alu	(185)	127	1	1894318
653	31.4	7.9	4.3	chr19	50777391	50777411	(7840205)	+	L1MC	LINE/L1	3018	3037	(3109)	1894316
40	2.6	0.0	0.0	chr19	50777412	50777450	(7840166)	+	(AG)n	Simple_repeat	1	39	(0)	1894320
653	31.4	7.9	4.3	chr19	50777451	50777615	(7840001)	+	L1MC	LINE/L1	3038	3222	(2924)	1894316
40	26.5	1.9	4.4	chr19	50821325	50821518	(7796098)	+	GA-rich	Low_complexity	1	189	(0)	1894402
44	0.0	0.0	0.0	chr19	51020199	51020236	(7597380)	+	(AG)n	Simple_repeat	1	38	(0)	1894830
152	28.0	3.7	1.8	chr19	51083231	51083511	(7534105)	+	GA-rich	Low_complexity	1	280	(0)	1894976
7846	6.7	1.8	0.4	chr19	51168816	51169808	(7447808)	C	LTR13	LTR/ERVK	(0)	1007	1	1895117
1663	25.6	2.7	2.3	chr19	51177910	51178384	(7439232)	+	L1MDb	LINE/L1	7	483	(5926)	1895128
17	0.0	0.0	0.0	chr19	51178453	51178471	(7439145)	+	(GT)n	Simple_repeat	1	19	(0)	1895129
62	1.8	0.0	0.0	chr19	51178474	51178530	(7439086)	+	(AG)n	Simple_repeat	1	57	(0)	1895130
200	33.7	1.0	0.7	chr19	51322534	51323421	(7294195)	+	(CT)n	Simple_repeat	1	891	(0)	1895385
246	27.1	2.0	4.0	chr19	51460956	51461055	(7156561)	C	MamRep1527	LTR	(772)	197	100	1895673
48	0.0	0.0	0.0	chr19	51461095	51461135	(7156481)	+	(GT)n	Simple_repeat	1	41	(0)	1895674
30	3.4	0.0	0.0	chr19	51461139	51461168	(7156448)	+	(GA)n	Simple_repeat	1	30	(0)	1895675
18	30.5	0.0	0.0	chr19	51461172	51461223	(7156393)	+	(TG)n	Simple_repeat	1	52	(0)	1895676
11558	17.2	2.7	1.5	chr19	51465903	51468055	(7149561)	+	L1M2	LINE/L1	3133	5315	(982)	1895683
33	27.8	1.0	1.9	chr19	51477132	51477234	(7140382)	+	(TC)n	Simple_repeat	1	104	(0)	1895705
2044	16.3	3.5	1.8	chr19	51477330	51477728	(7139888)	C	MER65A	LTR/ERV1	(0)	445	40	1895706
29	16.8	0.0	0.0	chr19	51478932	51478980	(7138636)	+	(AC)n	Simple_repeat	1	49	(0)	1895708
15	0.0	0.0	0.0	chr19	51478980	51478996	(7138620)	+	(AG)n	Simple_repeat	1	17	(0)	1895709
809	30.6	14.6	2.5	chr19	51541179	51542172	(7075444)	+	L2a	LINE/L2	2261	3406	(20)	1895792
31	7.3	2.3	0.0	chr19	51542244	51542287	(7075329)	+	(AC)n	Simple_repeat	1	45	(0)	1895793
332	31.9	4.0	1.2	chr19	51542295	51542462	(7075154)	C	L2b	LINE/L2	(242)	3133	2961	1895787
13	21.8	0.0	0.0	chr19	51551983	51552015	(7065601)	+	(CAGCTC)n	Simple_repeat	1	33	(0)	1895805
65	34.6	3.9	3.2	chr19	51552573	51553081	(7064535)	+	G-rich	Low_complexity	1	529	(0)	1895807
87	27.5	4.3	2.6	chr19	51688644	51689110	(6928506)	+	GA-rich	Low_complexity	1	475	(0)	1896048
12	14.7	3.3	0.0	chr19	51691132	51691161	(6926455)	+	(CCAGCC)n	Simple_repeat	1	31	(0)	1896054
96	28.0	5.8	1.5	chr19	51691175	51691606	(6926010)	+	GA-rich	Low_complexity	1	457	(0)	1896055
17	0.0	0.0	6.9	chr19	52527514	52527542	(6090074)	+	(CCCGC)n	Simple_repeat	1	29	(0)	1897629
311	23.6	2.2	0.0	chr19	52690986	52691096	(5926520)	+	AluJb	SINE/Alu	4	220	(82)	1897974
32	2.7	2.5	2.4	chr19	52691115	52691154	(5926462)	+	(TC)n	Simple_repeat	1	41	(0)	1897975
424	19.3	3.5	5.2	chr19	52691157	52691271	(5926345)	C	L1M4	LINE/L1	(1140)	5006	4894	1897976
1973	11.9	0.7	4.5	chr19	52691274	52691585	(5926031)	C	AluSz	SINE/Alu	(2)	310	11	1897977
2634	5.5	0.0	0.0	chr19	53506054	53506360	(5111256)	+	AluY	SINE/Alu	1	307	(4)	1899482
121	3.3	0.8	0.0	chr19	53506401	53506524	(5111092)	+	(CT)n	Simple_repeat	1	125	(0)	1899483
15	16.3	4.9	0.0	chr19	53506632	53506672	(5110944)	+	A-rich	Low_complexity	1	43	(0)	1899484
238	25.5	1.0	0.5	chr19	54096199	54096810	(4520806)	+	(CTCT)n	Simple_repeat	1	618	(0)	1901067
15	5.6	0.0	0.0	chr19	54418548	54418566	(4199050)	+	(CA)n	Simple_repeat	1	19	(0)	1901704
33	4.8	2.3	0.0	chr19	54473438	54473481	(4144135)	+	(GA)n	Simple_repeat	1	45	(0)	1901816
276	29.4	17.9	3.4	chr19	55028060	55028235	(3589381)	+	MIRb	SINE/MIR	54	260	(8)	1902810
374	32.4	3.3	12.3	chr19	55028322	55028439	(3589177)	C	MIR	SINE/MIR	(46)	216	93	1902811
677	6.9	1.9	0.0	chr19	55147210	55147599	(3470017)	C	MSR1	Satellite	(14)	397	1	1903105
2275	7.8	0.3	1.4	chr19	55217459	55217753	(3399863)	+	AluSx1	SINE/Alu	1	292	(20)	1903255
1044	11.6	0.0	0.0	chr19	55338350	55338487	(3279129)	+	AluSx	SINE/Alu	134	271	(41)	1903535
63	3.2	0.0	0.0	chr19	55338490	55338552	(3279064)	+	(CT)n	Simple_repeat	1	63	(0)	1903536
32	10.4	1.9	1.8	chr19	55338553	55338606	(3279010)	+	(AC)n	Simple_repeat	1	55	(0)	1903537
202	35.6	6.5	0.0	chr19	55408694	55408794	(3208822)	+	MIRc	SINE/MIR	57	164	(104)	1903670
791	18.9	10.5	4.4	chr19	55443556	55443760	(3173856)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1903745
24	13.6	0.0	0.0	chr19	55443846	55443887	(3173729)	+	(CTCT)n	Simple_repeat	1	42	(0)	1903746
689	26.8	3.2	1.6	chr19	55443974	55444159	(3173457)	+	MIR	SINE/MIR	51	239	(23)	1903747
13	23.2	0.0	2.4	chr19	55655318	55655359	(2962257)	+	G-rich	Low_complexity	1	42	(0)	1904237
15	10.4	3.0	2.9	chr19	55675287	55675319	(2942297)	+	(GGC)n	Simple_repeat	1	34	(0)	1904272
12	25.8	0.0	0.0	chr19	55675311	55675347	(2942269)	+	(GCGT)n	Simple_repeat	1	37	(0)	1904273
1240	22.9	3.0	1.9	chr19	57382983	57383252	(1234364)	C	LTR49-int	LTR/ERV1	(3549)	2397	2033	1907710
39	2.7	0.0	0.0	chr19	57383254	57383291	(1234325)	+	(GA)n	Simple_repeat	1	38	(0)	1907715
396	22.1	4.6	0.0	chr19	57383309	57383412	(1234204)	C	MER89	LTR/ERV1	(450)	109	1	1907716
25	28.3	2.6	4.2	chr19	58573746	58573860	(43756)	+	GA-rich	Low_complexity	1	118	(0)	1909748
15	17.9	0.0	0.0	chr19	58573838	58573869	(43747)	+	(AGAC)n	Simple_repeat	1	32	(0)	1909749
78	0.0	0.0	0.0	chr2	1658028	1658093	(240535436)	+	(CT)n	Simple_repeat	1	66	(0)	1912387
37	5.1	0.0	0.0	chr2	7611353	7611393	(234582136)	+	(CT)n	Simple_repeat	1	41	(0)	1920139
26	8.8	0.0	0.0	chr2	7611394	7611429	(234582100)	+	(AC)n	Simple_repeat	1	36	(0)	1920140
278	27.7	0.0	0.0	chr2	8302092	8302156	(233891373)	C	ERV3-16A3_I-int	LTR/ERVL	(4570)	426	362	1921165
11	16.8	10.9	1.6	chr2	8302182	8302236	(233891293)	+	(TCAGCC)n	Simple_repeat	1	61	(0)	1921174
77	1.4	0.0	0.0	chr2	9193872	9193941	(232999588)	+	(TC)n	Simple_repeat	1	70	(0)	1922535
15	17.6	4.1	3.9	chr2	9630679	9630727	(232562802)	+	(CGG)n	Simple_repeat	1	51	(0)	1923321
20	13.0	0.0	0.0	chr2	9816325	9816359	(232377170)	+	(AAAG)n	Simple_repeat	1	35	(0)	1923699
51	2.1	0.0	0.0	chr2	9816497	9816544	(232376985)	+	(TG)n	Simple_repeat	1	48	(0)	1923700
21	7.6	0.0	0.0	chr2	9816547	9816574	(232376955)	+	(AG)n	Simple_repeat	1	28	(0)	1923701
1779	9.4	0.0	4.5	chr2	9816588	9816832	(232376697)	C	AluSx1	SINE/Alu	(78)	234	1	1923702
345	36.3	12.6	0.0	chr2	10407807	10408076	(231785453)	C	L2c	LINE/L2	(62)	3325	3017	1924716
17	0.0	4.8	0.0	chr2	10408263	10408283	(231785246)	+	(TC)n	Simple_repeat	1	22	(0)	1924717
357	29.6	0.0	7.3	chr2	10511959	10512122	(231681407)	+	L1ME4a	LINE/L1	5969	6120	(4)	1924887
50	0.0	0.0	0.0	chr2	10512127	10512169	(231681360)	+	(GA)n	Simple_repeat	1	43	(0)	1924892
24	0.0	0.0	0.0	chr2	10512170	10512196	(231681333)	+	(TG)n	Simple_repeat	1	27	(0)	1924893
443	25.2	7.3	4.8	chr2	10512351	10512496	(231681033)	+	MamGypLTR3a	LTR/Gypsy	197	346	(635)	1924894
840	23.0	12.5	6.8	chr2	11082918	11083245	(231110284)	+	MLT2D	LTR/ERVL	7	357	(57)	1925988
37	5.1	0.0	0.0	chr2	11083246	11083286	(231110243)	+	(TC)n	Simple_repeat	1	41	(0)	1925989
52	2.1	0.0	0.0	chr2	11083290	11083338	(231110191)	+	(TG)n	Simple_repeat	1	49	(0)	1925990
840	23.0	12.5	6.8	chr2	11083339	11083388	(231110141)	+	MLT2D	LTR/ERVL	371	412	(2)	1925988
44	20.2	2.9	0.9	chr2	11716384	11716487	(230477042)	+	(TC)n	Simple_repeat	1	107	(0)	1927147
271	33.8	7.2	1.5	chr2	11716491	11716622	(230476907)	C	L2b	LINE/L2	(31)	3344	3205	1927148
307	36.8	1.7	1.1	chr2	12073827	12074001	(230119528)	C	MIR3	SINE/MIR	(3)	205	33	1927726
22	0.0	3.7	0.0	chr2	12074096	12074122	(230119407)	+	(TC)n	Simple_repeat	1	28	(0)	1927727
1190	23.5	0.8	10.9	chr2	12441903	12442313	(229751216)	+	MLT1A	LTR/ERVL-MaLR	6	374	(0)	1928328
1675	15.8	3.4	11.8	chr2	12463162	12463578	(229729951)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1928366
58	1.9	0.0	0.0	chr2	12520392	12520445	(229673084)	+	(AG)n	Simple_repeat	1	54	(0)	1928468
12	18.1	2.4	4.8	chr2	12520460	12520500	(229673029)	+	A-rich	Low_complexity	1	42	(0)	1928469
4576	9.0	2.2	1.2	chr2	15498425	15498583	(226694946)	+	L1PA13	LINE/L1	5482	5649	(514)	1932795
1676	12.9	16.8	8.0	chr2	15498584	15498929	(226694600)	+	MSTA	LTR/ERVL-MaLR	1	392	(36)	1932796
2158	13.4	1.0	0.3	chr2	15498930	15499227	(226694302)	C	AluSz	SINE/Alu	(12)	300	1	1932797
19	8.1	0.0	0.0	chr2	16624606	16624631	(225568898)	+	(TC)n	Simple_repeat	1	26	(0)	1934804
14	19.3	2.3	2.3	chr2	16625148	16625190	(225568339)	+	G-rich	Low_complexity	1	44	(0)	1934805
17	4.3	0.0	0.0	chr2	19704343	19704366	(222489163)	+	(AATC)n	Simple_repeat	1	24	(0)	1939179
19	0.0	0.0	0.0	chr2	19704365	19704385	(222489144)	+	(TC)n	Simple_repeat	1	21	(0)	1939180
43	0.0	0.0	0.0	chr2	19704386	19704422	(222489107)	+	(CA)n	Simple_repeat	1	37	(0)	1939181
1095	27.9	1.2	1.5	chr2	19773832	19774159	(222419370)	C	Tigger12c	DNA/TcMar-Tigger	(38)	696	370	1939281
430	19.5	6.8	0.0	chr2	19774167	19774248	(222419281)	C	MER91C	DNA/hAT-Tip100	(0)	140	53	1939282
53	0.0	0.0	0.0	chr2	19774269	19774313	(222419216)	+	(CT)n	Simple_repeat	1	45	(0)	1939283
352	32.2	11.0	0.0	chr2	19774332	19774533	(222418996)	C	Tigger12c	DNA/TcMar-Tigger	(490)	244	18	1939281
29	8.6	4.0	0.0	chr2	20379113	20379162	(221814367)	+	(CT)n	Simple_repeat	1	52	(0)	1940268
1952	10.9	8.7	2.2	chr2	20829845	20830030	(221363499)	+	THE1D	LTR/ERVL-MaLR	1	209	(172)	1940941
31	0.0	0.0	0.0	chr2	20830031	20830057	(221363472)	+	(CT)n	Simple_repeat	1	27	(0)	1940942
1952	10.9	8.7	2.2	chr2	20830058	20830226	(221363303)	+	THE1D	LTR/ERVL-MaLR	210	381	(0)	1940941
25	0.0	0.0	0.0	chr2	23536891	23536918	(218656611)	+	(CA)n	Simple_repeat	1	28	(0)	1944500
38	8.3	0.0	0.0	chr2	23536919	23536969	(218656560)	+	(CT)n	Simple_repeat	1	51	(0)	1944501
5106	16.0	5.7	0.0	chr2	24385381	24385735	(217807794)	C	L1M1	LINE/L1	(5418)	2147	1757	1946007
50	0.0	0.0	0.0	chr2	24385736	24385778	(217807751)	+	(TC)n	Simple_repeat	1	43	(0)	1946008
5106	16.0	5.7	0.0	chr2	24385779	24386249	(217807280)	C	L1M1	LINE/L1	(5809)	1756	1272	1946007
1952	17.0	0.3	0.7	chr2	26355746	26356039	(215837490)	C	AluJb	SINE/Alu	(17)	295	3	1949813
1291	10.8	0.5	1.0	chr2	26701964	26702149	(215491380)	C	L1PA13	LINE/L1	(12)	6151	5967	1950429
292	21.3	1.6	1.6	chr2	26702150	26702211	(215491318)	C	MLT1A	LTR/ERVL-MaLR	(123)	242	181	1950427
17	15.3	0.0	0.0	chr2	26702220	26702248	(215491281)	+	GA-rich	Low_complexity	1	29	(0)	1950430
920	32.1	13.1	1.6	chr2	26702337	26702686	(215490843)	+	L3	LINE/CR1	3615	4026	(73)	1950431
669	25.1	0.0	5.7	chr2	26725936	26726106	(215467423)	C	MIRb	SINE/MIR	(17)	251	87	1950477
43	0.0	0.0	0.0	chr2	26726107	26726143	(215467386)	+	(AG)n	Simple_repeat	1	37	(0)	1950478
669	25.1	0.0	5.7	chr2	26726144	26726165	(215467364)	C	MIRb	SINE/MIR	(182)	86	69	1950477
533	1.4	0.0	17.8	chr2	27050782	27050871	(215142658)	+	tRNA-Tyr-TAC	tRNA	1	74	(2)	1951107
2253	10.2	0.3	0.0	chr2	27116575	27116868	(215076661)	C	AluSx	SINE/Alu	(17)	295	1	1951203
62	0.0	0.0	0.0	chr2	27116872	27116924	(215076605)	+	(TC)n	Simple_repeat	1	53	(0)	1951204
2119	12.2	0.7	0.0	chr2	27116925	27117210	(215076319)	C	AluSz	SINE/Alu	(24)	288	1	1951205
969	27.8	10.7	1.8	chr2	27185149	27185592	(215007937)	+	MLT1L	LTR/ERVL-MaLR	120	607	(3)	1951334
348	31.7	4.0	0.0	chr2	27489999	27490118	(214703411)	C	MIRc	SINE/MIR	(66)	202	78	1951908
503	28.5	9.0	5.8	chr2	27490132	27490336	(214703193)	C	MIR	SINE/MIR	(19)	243	32	1951909
3942	24.3	6.9	8.5	chr2	27945334	27947106	(214246423)	C	L1ME1	LINE/L1	(1274)	5045	3303	1952775
2364	16.0	6.4	0.5	chr2	28001546	28001940	(214191589)	C	MSTB	LTR/ERVL-MaLR	(6)	420	1	1952842
523	25.2	0.0	8.9	chr2	28676032	28676188	(213517341)	+	MIR3	SINE/MIR	66	208	(0)	1953977
445	30.4	2.0	0.0	chr2	28676258	28676405	(213517124)	C	UCON105	Unknown	(70)	203	53	1953978
446	31.4	9.5	0.0	chr2	28676416	28676587	(213516942)	+	MIRc	SINE/MIR	2	191	(77)	1953979
43	0.0	0.0	0.0	chr2	30195449	30195485	(211998044)	+	(AG)n	Simple_repeat	1	37	(0)	1956541
1157	22.7	14.2	2.1	chr2	30693285	30693450	(211500079)	+	MLT1A	LTR/ERVL-MaLR	1	198	(176)	1957424
121	0.8	3.3	0.0	chr2	30693451	30693571	(211499958)	+	(TC)n	Simple_repeat	1	125	(0)	1957425
1157	22.7	14.2	2.1	chr2	30693572	30693732	(211499797)	+	MLT1A	LTR/ERVL-MaLR	199	374	(0)	1957424
33	26.7	3.6	1.7	chr2	32062385	32062495	(210131034)	+	GA-rich	Low_complexity	1	115	(0)	1959447
1450	19.9	6.2	3.7	chr2	32721621	32721916	(209471613)	C	AluJr	SINE/Alu	(7)	305	2	1960857
39	9.5	0.0	0.0	chr2	32905728	32905785	(209287744)	+	(GAGA)n	Simple_repeat	1	58	(0)	1961167
17	15.6	0.0	0.0	chr2	33476729	33476757	(208716772)	+	(CT)n	Simple_repeat	1	29	(0)	1962030
44	0.0	0.0	0.0	chr2	33476759	33476796	(208716733)	+	(GT)n	Simple_repeat	1	38	(0)	1962031
18	0.0	0.0	0.0	chr2	33540524	33540543	(208652986)	+	(TC)n	Simple_repeat	1	20	(0)	1962138
63	1.6	1.6	0.0	chr2	33540544	33540605	(208652924)	+	(TG)n	Simple_repeat	1	63	(0)	1962139
30	3.4	0.0	0.0	chr2	33540616	33540645	(208652884)	+	(TC)n	Simple_repeat	1	30	(0)	1962140
12	15.0	8.1	0.0	chr2	33540647	33540683	(208652846)	+	(TTCTCTC)n	Simple_repeat	1	40	(0)	1962141
22	14.3	2.1	2.0	chr2	36966336	36966383	(205227146)	+	(GCC)n	Simple_repeat	1	49	(0)	1966852
2225	18.0	4.2	2.8	chr2	37025923	37026419	(205167110)	+	MLT1D	LTR/ERVL-MaLR	1	504	(1)	1966982
1354	23.5	5.7	5.2	chr2	37532892	37533247	(204660282)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	190	1967873
60	1.8	0.0	0.0	chr2	37533248	37533303	(204660226)	+	(GA)n	Simple_repeat	1	56	(0)	1967874
1354	23.5	5.7	5.2	chr2	37533304	37533314	(204660215)	C	MLT1F	LTR/ERVL-MaLR	(359)	189	179	1967873
1072	4.7	0.0	2.3	chr2	37533325	37533452	(204660077)	C	AluYc	SINE/Alu	(10)	289	165	1967875
26	0.0	0.0	3.3	chr2	38364264	38364293	(203829236)	+	(AAAAT)n	Simple_repeat	1	30	(0)	1969067
3227	11.2	9.9	1.7	chr2	38515437	38515973	(203677556)	+	LTR18B	LTR/ERVL	1	586	(28)	1969388
528	34.5	3.6	1.0	chr2	38544411	38544706	(203648823)	C	L1MC5a	LINE/L1	(445)	2332	2029	1969449
12	11.6	7.3	4.5	chr2	38654808	38654848	(203538681)	+	(CCTTCT)n	Simple_repeat	1	44	(0)	1969648
1864	18.2	8.3	0.8	chr2	38654884	38655260	(203538269)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	1969649
2288	21.4	9.9	2.2	chr2	38720557	38721095	(203472434)	C	MLT1G3	LTR/ERVL-MaLR	(10)	585	1	1969823
26	6.1	0.0	0.0	chr2	39120971	39121004	(203072525)	+	(GCC)n	Simple_repeat	1	34	(0)	1970592
19	11.2	0.0	0.0	chr2	39121123	39121151	(203072378)	+	(GA)n	Simple_repeat	1	29	(0)	1970593
2286	11.9	16.3	1.2	chr2	39143282	39143713	(203049816)	C	LTR54	LTR/ERV1	(0)	510	1	1970646
1124	19.9	3.7	8.3	chr2	39143714	39143850	(203049679)	C	L1ME2	LINE/L1	(217)	5947	5814	1970645
43	13.8	0.0	0.0	chr2	39779337	39779409	(202414120)	+	(GGGAGA)n	Simple_repeat	1	73	(0)	1971734
472	22.1	14.0	2.9	chr2	39779499	39779658	(202413871)	C	MIR3	SINE/MIR	(14)	194	20	1971735
51	0.0	0.0	0.0	chr2	41939326	41939369	(200254160)	+	(TC)n	Simple_repeat	1	44	(0)	1974673
49	0.0	0.0	0.0	chr2	42154590	42154631	(200038898)	+	(TC)n	Simple_repeat	1	42	(0)	1975047
798	26.7	8.5	4.0	chr2	42154640	42154752	(200038777)	C	L1ME4a	LINE/L1	(147)	5977	5856	1975048
2478	6.1	0.0	0.3	chr2	42154753	42155047	(200038482)	C	AluSc	SINE/Alu	(14)	295	2	1975049
1728	20.9	0.0	1.1	chr2	42654639	42654915	(199538614)	C	AluJr	SINE/Alu	(38)	274	1	1976095
3721	22.5	4.5	10.2	chr2	42871976	42872199	(199321330)	+	L1ME3A	LINE/L1	3061	3262	(2884)	1976464
45	2.4	0.0	0.0	chr2	42872200	42872242	(199321287)	+	(AG)n	Simple_repeat	1	43	(0)	1976470
3721	22.5	4.5	10.2	chr2	42872243	42872456	(199321073)	+	L1ME3A	LINE/L1	3263	3460	(2686)	1976464
1237	23.4	7.0	3.3	chr2	42872457	42872788	(199320741)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	1976471
44	0.0	0.0	0.0	chr2	42925376	42925413	(199268116)	+	(AG)n	Simple_repeat	1	38	(0)	1976561
60	8.1	0.0	0.0	chr2	43025275	43025352	(199168177)	+	(CT)n	Simple_repeat	1	78	(0)	1976735
92	3.3	0.0	0.0	chr2	43046824	43046915	(199146614)	+	(TC)n	Simple_repeat	1	92	(0)	1976772
17	4.3	4.2	0.0	chr2	43076014	43076037	(199117492)	+	(CT)n	Simple_repeat	1	25	(0)	1976823
19	0.0	0.0	0.0	chr2	43169001	43169021	(199024508)	+	(TC)n	Simple_repeat	1	21	(0)	1977026
29	0.0	0.0	0.0	chr2	43169022	43169046	(199024483)	+	(CA)n	Simple_repeat	1	25	(0)	1977027
21	13.4	0.0	0.0	chr2	43229796	43229846	(198963683)	+	(GT)n	Simple_repeat	1	51	(0)	1977145
2311	6.0	0.3	1.4	chr2	43229847	43230130	(198963399)	C	AluSg7	SINE/Alu	(27)	282	2	1977146
1820	15.8	0.0	3.0	chr2	43790933	43791229	(198402300)	+	AluJr	SINE/Alu	1	288	(24)	1978086
17	17.5	6.5	0.0	chr2	43791230	43791257	(198402272)	+	GA-rich	Low_complexity	20	48	(0)	1978087
1656	10.6	8.2	8.8	chr2	43914924	43915207	(198278322)	+	AluSx1	SINE/Alu	1	282	(30)	1978243
23	0.0	0.0	0.0	chr2	43915208	43915232	(198278297)	+	(TC)n	Simple_repeat	1	25	(0)	1978244
54	0.0	0.0	0.0	chr2	43915233	43915278	(198278251)	+	(CA)n	Simple_repeat	1	46	(0)	1978245
864	19.6	2.7	3.2	chr2	44503729	44503913	(197689616)	C	MLT1A	LTR/ERVL-MaLR	(2)	372	189	1979313
33	21.8	1.4	0.0	chr2	44503938	44504008	(197689521)	+	GA-rich	Low_complexity	1	72	(0)	1979314
1039	15.6	4.3	1.1	chr2	44504019	44504200	(197689329)	C	MLT1A	LTR/ERVL-MaLR	(186)	188	1	1979313
53	3.9	0.0	0.0	chr2	44542485	44542538	(197650991)	+	(AC)n	Simple_repeat	1	54	(0)	1979380
23	3.7	0.0	0.0	chr2	44542539	44542566	(197650963)	+	(TC)n	Simple_repeat	1	28	(0)	1979381
1274	16.6	5.2	21.4	chr2	45109923	45110381	(197083148)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1980242
81	0.0	0.0	0.0	chr2	45297823	45297891	(196895638)	+	(GA)n	Simple_repeat	1	69	(0)	1980513
641	27.1	4.3	8.0	chr2	46256335	46256785	(195936744)	+	L2a	LINE/L2	2799	3254	(172)	1981976
18	12.0	0.0	0.0	chr2	46855217	46855243	(195338286)	+	(TC)n	Simple_repeat	1	27	(0)	1982940
60	0.0	0.0	0.0	chr2	46855244	46855294	(195338235)	+	(CA)n	Simple_repeat	1	51	(0)	1982941
38	2.8	0.0	0.0	chr2	47084774	47084810	(195108719)	+	(AC)n	Simple_repeat	1	37	(0)	1983338
21	4.0	0.0	0.0	chr2	47085005	47085030	(195108499)	+	(AC)n	Simple_repeat	1	26	(0)	1983339
43	2.5	0.0	0.0	chr2	47085031	47085071	(195108458)	+	(AG)n	Simple_repeat	1	41	(0)	1983340
268	27.7	2.9	1.0	chr2	47085104	47085205	(195108324)	+	MLT1O	LTR/ERVL-MaLR	439	542	(0)	1983337
18	19.6	0.0	0.0	chr2	47187504	47187544	(195005985)	+	(TCTCTC)n	Simple_repeat	1	41	(0)	1983504
475	29.6	7.6	0.1	chr2	47187585	47187750	(195005779)	C	MIR3	SINE/MIR	(9)	199	25	1983505
1782	7.6	1.3	0.0	chr2	47359540	47359762	(194833767)	C	7SK	RNA	(87)	244	19	1983900
15	27.3	1.6	3.2	chr2	47906142	47906203	(194287326)	+	G-rich	Low_complexity	1	63	(0)	1985045
18	14.2	10.6	0.0	chr2	47906280	47906326	(194287203)	+	(TC)n	Simple_repeat	1	52	(0)	1985046
4672	11.4	5.3	10.2	chr2	48137899	48138853	(194054676)	+	L1M1	LINE/L1	1492	2397	(5168)	1985444
1537	10.4	3.5	0.9	chr2	48422076	48422299	(193771230)	+	MER30	DNA/hAT-Charlie	1	230	(0)	1985937
32	14.4	1.8	0.0	chr2	48422372	48422426	(193771103)	+	(TC)n	Simple_repeat	1	56	(0)	1985938
1928	20.7	8.0	0.7	chr2	48422473	48422925	(193770604)	C	L1ME2z	LINE/L1	(296)	6148	5660	1985933
12	18.3	0.0	3.0	chr2	54076700	54076732	(188116797)	+	GA-rich	Low_complexity	1	33	(0)	1993718
2161	14.2	0.0	0.7	chr2	54522348	54522646	(187670883)	+	AluSx	SINE/Alu	1	298	(14)	1994506
54	1.9	1.9	0.0	chr2	54522647	54522700	(187670829)	+	(AG)n	Simple_repeat	1	55	(0)	1994507
19	0.0	0.0	0.0	chr2	54522712	54522735	(187670794)	+	(GAAA)n	Simple_repeat	1	24	(0)	1994508
209	32.7	6.1	6.1	chr2	54823720	54823833	(187369696)	+	MIRb	SINE/MIR	19	132	(136)	1994896
48	4.1	0.0	0.0	chr2	54823851	54823900	(187369629)	+	(TC)n	Simple_repeat	1	50	(0)	1994897
203	27.3	11.5	0.0	chr2	54823992	54824068	(187369461)	C	MIRc	SINE/MIR	(166)	102	16	1994898
188	20.5	0.0	0.0	chr2	55051353	55051391	(187142138)	+	UCON80_AMi	Unknown	72	110	(112)	1995183
2446	12.2	0.0	0.0	chr2	55059552	55059853	(187133676)	+	AluSx1	SINE/Alu	1	302	(10)	1995206
2092	10.1	0.7	7.9	chr2	55059854	55059979	(187133550)	C	AluJb	SINE/Alu	(195)	117	1	1995205
393	29.4	10.9	7.5	chr2	55112221	55112459	(187081070)	C	MIRb	SINE/MIR	(0)	268	21	1995315
2175	7.0	7.1	0.0	chr2	55519117	55519403	(186674126)	C	AluSx	SINE/Alu	(0)	312	4	1996064
1862	14.9	2.4	2.8	chr2	55629118	55629406	(186564123)	C	AluJb	SINE/Alu	(24)	288	1	1996277
1509	17.6	7.8	0.4	chr2	55942828	55943088	(186250441)	+	AluJb	SINE/Alu	1	282	(30)	1996789
60	0.0	0.0	0.0	chr2	55943104	55943154	(186250375)	+	(CA)n	Simple_repeat	1	51	(0)	1996790
385	26.3	12.7	0.5	chr2	55943182	55943368	(186250161)	C	L1ME3A	LINE/L1	(925)	5221	5009	1996788
2363	15.3	1.9	10.3	chr2	56133558	56134023	(186059506)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1997035
24	11.1	2.6	0.0	chr2	57516828	57516866	(184676663)	+	(GA)n	Simple_repeat	1	40	(0)	1998682
32	10.3	1.9	0.0	chr2	59179481	59179505	(183014024)	+	(AG)n	Simple_repeat	1	26	(0)	2000775
43	0.0	0.0	0.0	chr2	59179506	59179542	(183013987)	+	(AC)n	Simple_repeat	1	37	(0)	2000776
32	10.3	1.9	0.0	chr2	59179543	59179569	(183013960)	+	(AG)n	Simple_repeat	1	27	(0)	2000777
57	1.9	0.0	0.0	chr2	59185119	59185171	(183008358)	+	(GA)n	Simple_repeat	1	53	(0)	2000783
363	30.9	0.0	1.8	chr2	59185285	59185396	(183008133)	C	MIRb	SINE/MIR	(48)	220	111	2000784
481	22.5	6.5	0.8	chr2	60559888	60560017	(181633512)	+	MER131	DNA?	24	161	(54)	2002595
57	8.2	3.3	0.0	chr2	60560050	60560140	(181633389)	+	(TC)n	Simple_repeat	1	94	(0)	2002596
32	0.0	0.0	0.0	chr2	61604849	61604883	(180588646)	+	(CT)n	Simple_repeat	1	35	(0)	2004712
48	0.0	0.0	0.0	chr2	61604884	61604924	(180588605)	+	(TG)n	Simple_repeat	1	41	(0)	2004713
293	29.5	12.0	8.2	chr2	62202110	62202478	(179991051)	C	L2c	LINE/L2	(12)	3414	2939	2006027
14	14.9	9.2	4.2	chr2	62296756	62296820	(179896709)	+	G-rich	Low_complexity	1	71	(0)	2006212
25	17.5	0.0	0.0	chr2	62296868	62296912	(179896617)	+	(TC)n	Simple_repeat	1	45	(0)	2006213
15	23.4	6.9	1.6	chr2	62412128	62412185	(179781344)	+	GA-rich	Low_complexity	1	62	(0)	2006479
108	9.8	0.0	0.0	chr2	62412298	62412452	(179781077)	+	(TC)n	Simple_repeat	1	155	(0)	2006480
272	21.1	4.7	0.0	chr2	62506436	62506506	(179687023)	+	L1ME4a	LINE/L1	5517	5579	(545)	2006624
937	16.5	3.0	1.8	chr2	62894764	62894927	(179298602)	+	AluJr4	SINE/Alu	131	296	(16)	2007164
34	0.0	0.0	0.0	chr2	62894928	62894956	(179298573)	+	(AG)n	Simple_repeat	1	29	(0)	2007165
17	4.2	0.0	0.0	chr2	62894962	62894986	(179298543)	+	(GCAG)n	Simple_repeat	1	25	(0)	2007166
781	19.7	18.4	1.2	chr2	62895025	62895276	(179298253)	+	L1ME1	LINE/L1	5847	6151	(28)	2007167
1859	17.4	13.5	2.9	chr2	63662415	63662639	(178530890)	C	LTR40A1	LTR/ERVL	(79)	505	278	2008153
33	0.0	0.0	0.0	chr2	63662640	63662667	(178530862)	+	(AG)n	Simple_repeat	1	28	(0)	2008154
1859	17.4	13.5	2.9	chr2	63662668	63662891	(178530638)	C	LTR40A1	LTR/ERVL	(307)	277	1	2008153
33	0.0	0.0	0.0	chr2	64273160	64273187	(177920342)	+	(TC)n	Simple_repeat	1	28	(0)	2009093
3141	12.4	4.2	4.9	chr2	64403168	64403716	(177789813)	C	LTR35A	LTR/ERV1	(2)	545	1	2009295
57	17.3	0.0	0.0	chr2	64490280	64490363	(177703166)	+	(CA)n	Simple_repeat	1	84	(0)	2009446
29	0.0	0.0	0.0	chr2	64490364	64490388	(177703141)	+	(CT)n	Simple_repeat	1	25	(0)	2009447
57	17.3	0.0	0.0	chr2	64490389	64490408	(177703121)	+	(CA)n	Simple_repeat	1	20	(0)	2009448
59	1.9	0.0	0.0	chr2	64700626	64700680	(177492849)	+	(TC)n	Simple_repeat	1	55	(0)	2009790
2312	10.9	0.3	0.6	chr2	64700681	64700985	(177492544)	C	AluSx1	SINE/Alu	(7)	305	1	2009791
677	18.1	0.0	3.8	chr2	64873240	64873371	(177320158)	+	Charlie1a	DNA/hAT-Charlie	1329	1455	(0)	2010101
202	34.0	3.1	2.1	chr2	64873453	64873548	(177319981)	C	L2c	LINE/L2	(48)	3339	3243	2010102
14	24.5	0.0	2.2	chr2	64876469	64876513	(177317016)	+	(CTCCTC)n	Simple_repeat	1	45	(0)	2010113
601	27.0	16.8	8.2	chr2	64958513	64959002	(177234527)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	21	2010285
1411	15.7	7.1	0.0	chr2	64959003	64959108	(177234421)	C	L1MB3	LINE/L1	(0)	6183	6072	2010286
43	0.0	0.0	0.0	chr2	64959109	64959145	(177234384)	+	(CT)n	Simple_repeat	1	37	(0)	2010287
1411	15.7	7.1	0.0	chr2	64959146	64959324	(177234205)	C	L1MB3	LINE/L1	(112)	6071	5877	2010286
26	9.8	2.2	0.0	chr2	64988911	64988955	(177204574)	+	(CCTCC)n	Simple_repeat	1	46	(0)	2010348
19	11.0	0.0	11.3	chr2	65130313	65130374	(177063155)	+	(CCCTC)n	Simple_repeat	1	62	(0)	2010633
15763	14.9	1.4	0.3	chr2	65198457	65200856	(176992673)	+	L1M1	LINE/L1	2	2842	(1233)	2010808
58	1.9	0.0	0.0	chr2	65302104	65302157	(176891372)	+	(AG)n	Simple_repeat	1	54	(0)	2011014
29	0.0	0.0	0.0	chr2	65341105	65341129	(176852400)	+	(GT)n	Simple_repeat	1	25	(0)	2011088
2813	1.0	0.0	1.0	chr2	65659809	65660117	(176533412)	+	AluYa5	SINE/Alu	1	306	(5)	2011714
22	11.4	2.6	0.0	chr2	65660176	65660191	(176533338)	+	(GA)n	Simple_repeat	1	17	(0)	2011715
31	0.0	0.0	0.0	chr2	65660192	65660218	(176533311)	+	(AC)n	Simple_repeat	1	27	(0)	2011716
22	11.4	2.6	0.0	chr2	65660219	65660240	(176533289)	+	(GA)n	Simple_repeat	2	23	(0)	2011717
60	1.8	0.0	0.0	chr2	65814753	65814808	(176378721)	+	(GA)n	Simple_repeat	1	56	(0)	2011946
61	17.4	0.0	0.0	chr2	65835481	65835592	(176357937)	+	GA-rich	Low_complexity	1	112	(0)	2011983
30	9.6	2.2	0.0	chr2	66435286	66435331	(175758198)	+	(AG)n	Simple_repeat	1	47	(0)	2012779
36	0.0	0.0	2.9	chr2	66555255	66555289	(175638240)	+	(TC)n	Simple_repeat	1	35	(0)	2012896
33	24.8	6.1	0.8	chr2	66575335	66575449	(175618080)	+	(TC)n	Simple_repeat	1	122	(0)	2012928
17	8.8	0.0	0.0	chr2	66581101	66581124	(175612405)	+	(AC)n	Simple_repeat	1	24	(0)	2012931
33	0.0	3.1	0.0	chr2	66581220	66581251	(175612278)	+	(CT)n	Simple_repeat	1	33	(0)	2012932
22	0.0	0.0	0.0	chr2	66581252	66581275	(175612254)	+	(AC)n	Simple_repeat	1	24	(0)	2012933
12	13.3	5.7	2.7	chr2	66581344	66581378	(175612151)	+	(TTG)n	Simple_repeat	1	37	(0)	2012934
24	8.9	0.0	0.0	chr2	66915927	66915960	(175277569)	+	(TC)n	Simple_repeat	1	34	(0)	2013375
38	2.8	0.0	0.0	chr2	66915961	66915997	(175277532)	+	(TG)n	Simple_repeat	1	37	(0)	2013376
542	33.9	3.8	3.4	chr2	66916041	66916278	(175277251)	+	MIRb	SINE/MIR	17	255	(13)	2013377
24	8.9	2.8	0.0	chr2	68135537	68135572	(174057957)	+	(GA)n	Simple_repeat	1	37	(0)	2015107
32	7.8	0.0	0.0	chr2	68253597	68253637	(173939892)	+	(GT)n	Simple_repeat	1	41	(0)	2015307
358	34.2	14.0	1.5	chr2	68438844	68439208	(173754321)	C	L2a	LINE/L2	(313)	3113	2701	2015613
1909	17.9	1.5	6.2	chr2	68501842	68502257	(173691272)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2015708
61	19.9	0.8	0.0	chr2	68766697	68766818	(173426711)	+	(CT)n	Simple_repeat	1	123	(0)	2016056
38	6.9	0.0	0.0	chr2	68784146	68784191	(173409338)	+	(TC)n	Simple_repeat	1	46	(0)	2016084
18	0.0	4.5	0.0	chr2	68784192	68784213	(173409316)	+	(AC)n	Simple_repeat	1	23	(0)	2016085
584	31.4	0.6	0.0	chr2	68855266	68855434	(173338095)	+	MLT1F1	LTR/ERVL-MaLR	1	170	(399)	2016178
41	0.0	0.0	0.0	chr2	68855442	68855476	(173338053)	+	(TC)n	Simple_repeat	1	35	(0)	2016179
47	0.0	0.0	0.0	chr2	69640015	69640054	(172553475)	+	(AC)n	Simple_repeat	1	40	(0)	2017435
24	0.0	0.0	0.0	chr2	69640055	69640080	(172553449)	+	(TC)n	Simple_repeat	1	26	(0)	2017436
491	23.1	18.2	2.0	chr2	69640122	69640204	(172553325)	C	MIRb	SINE/MIR	(0)	262	145	2017437
444	20.7	23.3	0.0	chr2	69640205	69640349	(172553180)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	2017438
2538	28.6	7.0	8.2	chr2	69659747	69661338	(172532191)	+	L1MEd	LINE/L1	99	1669	(5417)	2017475
226	32.2	8.4	5.7	chr2	69934049	69934292	(172259237)	C	L2c	LINE/L2	(4)	3383	3133	2018025
1271	24.1	6.4	3.2	chr2	69934494	69934900	(172258629)	C	L1ME4b	LINE/L1	(31)	861	441	2018026
307	31.1	9.5	4.4	chr2	70085548	70085755	(172107774)	+	MIR	SINE/MIR	38	250	(12)	2018347
320	23.5	8.4	2.0	chr2	70190408	70190507	(172003022)	C	MIRb	SINE/MIR	(43)	225	119	2018609
7772	6.7	0.0	6.2	chr2	70976795	70977868	(171215661)	C	LTR13	LTR/ERVK	(0)	1007	1	2019924
411	23.4	5.9	2.6	chr2	71469936	71470049	(170723480)	C	L2a	LINE/L2	(5)	3421	3304	2020690
19	4.3	0.0	0.0	chr2	71900155	71900178	(170293351)	+	(TC)n	Simple_repeat	1	24	(0)	2021301
938	26.9	0.8	0.0	chr2	71900296	71900533	(170292996)	+	MIR	SINE/MIR	5	244	(18)	2021302
16	38.0	1.1	0.0	chr2	72895615	72895705	(169297824)	+	GA-rich	Low_complexity	1	92	(0)	2022766
29	31.7	1.1	0.0	chr2	72895761	72895854	(169297675)	+	(CA)n	Simple_repeat	1	95	(0)	2022767
490	27.3	5.3	6.1	chr2	73145860	73146038	(169047491)	C	L1ME3G	LINE/L1	(257)	667	611	2023185
2270	17.0	6.3	1.0	chr2	73146039	73146441	(169047088)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2023186
2263	10.1	1.0	0.0	chr2	73276128	73276425	(168917104)	+	AluSq2	SINE/Alu	1	301	(12)	2023434
368	32.9	7.7	0.0	chr2	73276498	73276560	(168916969)	+	L1M5	LINE/L1	3190	3252	(2894)	2023435
63	4.7	0.0	0.0	chr2	73276561	73276627	(168916902)	+	(AG)n	Simple_repeat	1	67	(0)	2023436
368	32.9	7.7	0.0	chr2	73276628	73276837	(168916692)	+	L1M5	LINE/L1	3253	3485	(2661)	2023435
3465	25.9	12.7	3.0	chr2	73472507	73473920	(168719609)	+	L1M4	LINE/L1	18	1561	(5956)	2023769
31	0.0	0.0	0.0	chr2	73473921	73473947	(168719582)	+	(AG)n	Simple_repeat	1	27	(0)	2023770
3465	25.9	12.7	3.0	chr2	73473948	73474073	(168719456)	+	L1M4	LINE/L1	1562	1727	(5790)	2023769
67	9.3	2.9	0.0	chr2	74290588	74290690	(167902839)	+	(GA)n	Simple_repeat	1	106	(0)	2025148
878	10.5	4.3	2.9	chr2	74319516	74319652	(167873877)	+	MER73	LTR/ERVL	1	139	(505)	2025203
1386	16.5	8.4	1.9	chr2	74319659	74319924	(167873605)	+	MER73	LTR/ERVL	345	629	(15)	2025203
2260	12.3	0.7	0.0	chr2	74465702	74466011	(167727518)	+	AluSq2	SINE/Alu	1	312	(1)	2025438
28	15.5	0.0	0.0	chr2	74466012	74466062	(167727467)	+	GA-rich	Low_complexity	1	51	(0)	2025439
521	25.1	5.3	4.9	chr2	75627958	75628162	(166565367)	+	U3	snRNA	6	211	(6)	2027262
45774	5.2	1.5	0.5	chr2	75872462	75878417	(166315112)	+	HERV17-int	LTR/ERV1	1	6019	(2607)	2027640
60	7.1	0.0	0.0	chr2	80090147	80090220	(162103309)	+	(TG)n	Simple_repeat	1	74	(0)	2033241
599	22.7	9.0	1.1	chr2	82537829	82538002	(159655527)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2036469
53	1.9	1.9	0.0	chr2	82538016	82538068	(159655461)	+	(TC)n	Simple_repeat	1	54	(0)	2036470
29	0.0	0.0	0.0	chr2	82538069	82538100	(159655429)	+	(AC)n	Simple_repeat	1	32	(0)	2036471
1840	28.6	5.5	2.7	chr2	83125531	83126199	(159067330)	C	L1ME1	LINE/L1	(54)	6125	5437	2037226
1219	24.5	6.4	3.5	chr2	83126200	83126331	(159067198)	+	MLT1F1	LTR/ERVL-MaLR	1	131	(438)	2037223
75	2.7	1.3	0.0	chr2	83126332	83126407	(159067122)	+	(GA)n	Simple_repeat	1	77	(0)	2037227
1219	25.6	9.2	3.3	chr2	83126408	83126771	(159066758)	+	MLT1F1	LTR/ERVL-MaLR	130	548	(12)	2037223
2344	10.3	2.3	1.0	chr2	85024195	85024495	(157169034)	+	AluSx1	SINE/Alu	1	305	(7)	2039954
1266	28.8	6.9	9.2	chr2	85024496	85024547	(157168982)	C	L1ME3E	LINE/L1	(972)	5174	5120	2039951
38	2.8	0.0	0.0	chr2	85024548	85024584	(157168945)	+	(GA)n	Simple_repeat	1	37	(0)	2039955
1266	28.8	6.9	9.2	chr2	85024585	85025342	(157168187)	C	L1ME3E	LINE/L1	(1027)	5119	4381	2039951
21	4.0	0.0	0.0	chr2	85497307	85497342	(156696187)	+	(AC)n	Simple_repeat	1	36	(0)	2040902
69	0.0	1.6	0.0	chr2	85497343	85497404	(156696125)	+	(AG)n	Simple_repeat	1	63	(0)	2040903
745	17.7	0.9	0.1	chr2	85497405	85497534	(156695995)	C	FLAM_C	SINE/Alu	(82)	220	1	2040904
1332	23.2	11.7	7.5	chr2	85501051	85501540	(156691989)	C	LTR33A	LTR/ERVL	(1)	519	7	2040913
187	24.1	6.9	0.0	chr2	86221022	86221075	(155972454)	C	MIR3	SINE/MIR	(6)	202	145	2042263
31	0.0	0.0	0.0	chr2	86223736	86223762	(155969767)	+	(TC)n	Simple_repeat	1	27	(0)	2042265
13	35.5	0.0	2.6	chr2	86223884	86223961	(155969568)	+	A-rich	Low_complexity	1	78	(0)	2042266
17	35.7	0.0	0.0	chr2	86223899	86223959	(155969570)	+	GA-rich	Low_complexity	1	61	(0)	2042267
6201	12.3	1.1	5.5	chr2	86374858	86375337	(155818192)	C	L1MA5	LINE/L1	(0)	7719	7241	2042569
60	3.5	0.0	0.0	chr2	86375338	86375397	(155818132)	+	(TC)n	Simple_repeat	1	60	(0)	2042570
1522	15.9	1.4	7.1	chr2	86375398	86375692	(155817837)	C	AluJb	SINE/Alu	(34)	278	1	2042571
1926	14.8	0.3	6.0	chr2	86401141	86401427	(155792102)	C	MER47A	DNA/TcMar-Tigger	(76)	290	7	2042604
53	6.6	0.0	0.0	chr2	86401430	86401492	(155792037)	+	(TC)n	Simple_repeat	1	63	(0)	2042606
2065	21.9	7.3	0.9	chr2	86401494	86401976	(155791553)	C	MLT2B3	LTR/ERVL	(45)	507	1	2042603
540	22.3	18.6	1.3	chr2	86786131	86786289	(155407240)	C	MIRb	SINE/MIR	(45)	223	31	2043189
266	31.4	3.4	0.0	chr2	86787749	86787834	(155405695)	+	MIRb	SINE/MIR	169	257	(11)	2043193
17	5.0	0.0	0.0	chr2	86787878	86787898	(155405631)	+	(AG)n	Simple_repeat	1	21	(0)	2043194
34	0.0	0.0	0.0	chr2	86787899	86787927	(155405602)	+	(GT)n	Simple_repeat	1	29	(0)	2043195
2013	18.7	1.4	4.8	chr2	87105557	87105972	(155087557)	+	MER54A	LTR/ERVL	3	401	(500)	2043771
86	0.0	1.3	0.0	chr2	87105973	87106049	(155087480)	+	(TC)n	Simple_repeat	1	78	(0)	2043772
2013	18.7	1.4	4.8	chr2	87106050	87106070	(155087459)	+	MER54A	LTR/ERVL	402	425	(476)	2043771
1566	19.4	14.1	0.5	chr2	87568517	87568884	(154624645)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2044422
1494	19.3	3.3	2.7	chr2	87645212	87645512	(154548017)	+	AluJr	SINE/Alu	2	304	(8)	2044517
1080	24.6	2.9	14.2	chr2	87645513	87645534	(154547995)	+	MLT1C	LTR/ERVL-MaLR	183	187	(280)	2044516
65	1.6	1.6	0.0	chr2	87645535	87645597	(154547932)	+	(TC)n	Simple_repeat	1	64	(0)	2044518
1080	24.6	2.9	14.2	chr2	87645598	87645905	(154547624)	+	MLT1C	LTR/ERVL-MaLR	188	464	(3)	2044516
249	26.2	15.1	3.6	chr2	88015989	88016099	(154177430)	+	AluJb	SINE/Alu	118	243	(59)	2045130
421	22.6	8.2	1.0	chr2	88016105	88016206	(154177323)	C	AluJo	SINE/Alu	(195)	117	8	2045131
923	20.9	0.0	1.6	chr2	88016358	88016547	(154176982)	C	U2	snRNA	(1)	187	1	2045132
365	32.8	1.6	0.0	chr2	88674219	88674337	(153519192)	+	L2a	LINE/L2	3306	3426	(0)	2046486
19	0.0	4.2	0.0	chr2	88674390	88674413	(153519116)	+	(AG)n	Simple_repeat	1	25	(0)	2046487
1680	14.8	8.4	1.2	chr2	88674593	88674913	(153518616)	C	MER65A	LTR/ERV1	(99)	346	1	2046488
56	0.0	0.0	0.0	chr2	96102187	96102234	(146091295)	+	(TG)n	Simple_repeat	1	48	(0)	2051565
24	3.5	0.0	0.0	chr2	96102235	96102259	(146091270)	+	(AG)n	Simple_repeat	2	26	(0)	2051566
1311	8.9	0.0	0.6	chr2	96102305	96102473	(146091056)	C	AluSc8	SINE/Alu	(16)	295	128	2051567
1085	10.9	0.7	0.0	chr2	96172076	96172222	(146021307)	+	AluSc8	SINE/Alu	136	283	(28)	2051669
38	2.8	0.0	0.0	chr2	96172223	96172259	(146021270)	+	(AC)n	Simple_repeat	1	37	(0)	2051670
276	12.8	0.0	0.0	chr2	96172264	96172302	(146021227)	+	FRAM	SINE/Alu	119	157	(19)	2051671
15	13.7	0.0	0.0	chr2	96172303	96172326	(146021203)	+	(CA)n	Simple_repeat	1	24	(0)	2051672
251	9.1	0.0	0.0	chr2	96172329	96172361	(146021168)	+	Alu	SINE/Alu	254	286	(15)	2051673
34	0.0	0.0	0.0	chr2	96172373	96172401	(146021128)	+	(AG)n	Simple_repeat	1	29	(0)	2051674
241	13.5	0.0	0.0	chr2	96172408	96172444	(146021085)	+	Alu	SINE/Alu	254	290	(11)	2051675
16	22.1	7.1	3.3	chr2	96172482	96172565	(146020964)	+	A-rich	Low_complexity	1	90	(0)	2051676
2733	15.4	6.2	0.2	chr2	96391246	96391713	(145801816)	C	MER54B	LTR/ERVL	(0)	793	296	2052061
29	10.3	0.0	0.0	chr2	96391714	96391755	(145801774)	+	(AG)n	Simple_repeat	1	42	(0)	2052062
1033	15.2	3.5	0.6	chr2	96391795	96391959	(145801570)	C	MER54B	LTR/ERVL	(508)	285	116	2052061
297	18.1	2.7	5.2	chr2	96409606	96409797	(145783732)	C	HERVIP10FH-int	LTR/ERV1	(4091)	1011	825	2052099
2413	6.5	0.0	0.0	chr2	96880601	96880892	(145312637)	C	AluY	SINE/Alu	(18)	293	2	2052945
4327	10.9	3.5	1.0	chr2	96921850	96922343	(145271186)	+	MER41B	LTR/ERV1	1	509	(125)	2053011
3925	9.9	3.2	0.6	chr2	97711948	97712496	(144481033)	C	LTR6A	LTR/ERV1	(0)	564	1	2054036
838	19.8	5.5	0.6	chr2	98129009	98129181	(144064348)	C	MLT1A	LTR/ERVL-MaLR	(5)	369	188	2054582
42	2.3	2.3	0.0	chr2	98129182	98129225	(144064304)	+	(GA)n	Simple_repeat	1	45	(0)	2054583
779	20.7	5.8	1.0	chr2	98129226	98129246	(144064283)	C	MLT1A	LTR/ERVL-MaLR	(188)	202	182	2054582
60	13.4	4.3	0.8	chr2	98129260	98129375	(144064154)	+	GA-rich	Low_complexity	1	121	(0)	2054584
692	17.9	4.4	12.6	chr2	98129376	98129573	(144063956)	C	MLT1A	LTR/ERVL-MaLR	(191)	183	3	2054582
4816	18.5	7.5	4.1	chr2	98448375	98448709	(143744820)	C	L1MC4	LINE/L1	(263)	7779	7453	2055026
1439	20.0	4.4	1.7	chr2	98448710	98448999	(143744530)	C	AluJr	SINE/Alu	(11)	301	4	2055029
2111	12.4	0.3	1.0	chr2	98641718	98642015	(143551514)	+	AluSc8	SINE/Alu	6	301	(10)	2055257
17	27.1	0.0	3.4	chr2	98642154	98642212	(143551317)	+	A-rich	Low_complexity	1	59	(0)	2055258
38	0.0	0.0	0.0	chr2	99648886	99648918	(142544611)	+	(CA)n	Simple_repeat	1	33	(0)	2056797
18	0.0	0.0	0.0	chr2	99648919	99648938	(142544591)	+	(TC)n	Simple_repeat	1	20	(0)	2056798
17	7.9	0.0	0.0	chr2	99648956	99648989	(142544540)	+	(AAACC)n	Simple_repeat	1	34	(0)	2056799
34	3.0	0.0	0.0	chr2	99882056	99882089	(142311440)	+	(TC)n	Simple_repeat	1	34	(0)	2057106
226	33.3	5.0	1.0	chr2	99974294	99974390	(142219139)	+	L3	LINE/CR1	578	678	(3421)	2057221
2187	10.4	6.3	3.5	chr2	101133728	101134097	(141059432)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2059028
1808	18.5	3.6	2.8	chr2	101134098	101134154	(141059375)	C	MLT1A0	LTR/ERVL-MaLR	(310)	55	1	2059027
32	4.9	2.3	0.0	chr2	101134155	101134197	(141059332)	+	(CT)n	Simple_repeat	1	44	(0)	2059029
44	0.0	0.0	0.0	chr2	101134198	101134235	(141059294)	+	(CA)n	Simple_repeat	1	38	(0)	2059030
20	17.1	0.0	6.7	chr2	101134236	101134255	(141059274)	+	(CTCTTT)n	Simple_repeat	3	20	(0)	2059031
27	0.0	3.1	0.0	chr2	101729070	101729101	(140464428)	+	(AG)n	Simple_repeat	1	33	(0)	2060140
35	0.0	0.0	0.0	chr2	101729102	101729131	(140464398)	+	(GT)n	Simple_repeat	1	30	(0)	2060141
47	2.3	0.0	0.0	chr2	101965172	101965216	(140228313)	+	(AG)n	Simple_repeat	1	45	(0)	2060421
362	23.0	5.4	4.8	chr2	101965299	101965444	(140228085)	+	MER5A	DNA/hAT-Charlie	37	183	(6)	2060422
164	21.2	0.3	0.0	chr2	101992047	101992388	(140201141)	+	GA-rich	Low_complexity	1	343	(0)	2060464
274	29.9	2.1	14.9	chr2	102056120	102056280	(140137249)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	456	2060571
349	33.3	2.3	2.3	chr2	102056315	102056486	(140137043)	C	MLT1K	LTR/ERVL-MaLR	(235)	360	189	2060571
1694	11.6	0.0	0.0	chr2	102056503	102056717	(140136812)	+	AluSx1	SINE/Alu	81	295	(17)	2060572
18	26.3	0.0	0.0	chr2	102227797	102227847	(139965682)	+	(TCTC)n	Simple_repeat	1	51	(0)	2060808
1565	12.1	11.1	12.7	chr2	102601202	102601588	(139591941)	C	THE1D	LTR/ERVL-MaLR	(0)	381	2	2061291
1917	14.4	13.2	1.1	chr2	105202210	105202389	(136991140)	C	MSTA	LTR/ERVL-MaLR	(4)	424	218	2064563
40	2.6	0.0	0.0	chr2	105202390	105202428	(136991101)	+	(GA)n	Simple_repeat	1	39	(0)	2064564
1917	14.4	13.2	1.1	chr2	105202429	105202619	(136990910)	C	MSTA	LTR/ERVL-MaLR	(211)	217	2	2064563
4790	8.9	0.5	0.8	chr2	105467826	105468461	(136725068)	+	MER41B	LTR/ERV1	1	634	(0)	2064997
847	28.7	11.7	2.3	chr2	105468462	105468771	(136724758)	C	L2	LINE/L2	(1632)	1787	1435	2064996
9576	7.6	1.2	11.7	chr2	108524358	108525937	(133667592)	+	Harlequin-int	LTR/ERV1	1	1412	(5484)	2069386
18	4.7	0.0	0.0	chr2	108618502	108618523	(133575006)	+	(CT)n	Simple_repeat	1	22	(0)	2069538
2417	7.7	0.3	0.3	chr2	108618545	108618844	(133574685)	+	AluSc	SINE/Alu	1	300	(9)	2069539
18	7.9	3.7	0.0	chr2	111147320	111147346	(131046183)	+	(CT)n	Simple_repeat	1	28	(0)	2073153
53	0.0	0.0	0.0	chr2	111147347	111147391	(131046138)	+	(CA)n	Simple_repeat	1	45	(0)	2073154
1539	19.7	14.1	0.5	chr2	111381933	111382300	(130811229)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2073452
16	9.6	0.0	0.0	chr2	112056227	112056249	(130137280)	+	(A)n	Simple_repeat	1	23	(0)	2074479
1500	28.2	3.6	7.7	chr2	112132466	112133022	(130060507)	+	MER74A	LTR/ERVL	14	546	(12)	2074592
2688	11.3	0.0	0.8	chr2	112196756	112197122	(129996407)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2074694
1152	26.2	10.1	6.0	chr2	112197123	112197234	(129996295)	+	MLT1C	LTR/ERVL-MaLR	43	176	(291)	2074693
48	0.0	0.0	0.0	chr2	112197235	112197275	(129996254)	+	(AC)n	Simple_repeat	1	41	(0)	2074695
1152	26.2	10.1	6.0	chr2	112197276	112197564	(129995965)	+	MLT1C	LTR/ERVL-MaLR	177	467	(0)	2074693
7557	6.9	4.8	1.9	chr2	112351998	112352407	(129841122)	C	Harlequin-int	LTR/ERV1	(5477)	1419	985	2074932
38	4.3	2.0	2.0	chr2	112352408	112352457	(129841072)	+	(TC)n	Simple_repeat	1	51	(0)	2074935
7557	6.9	4.8	1.9	chr2	112352458	112353168	(129840361)	C	Harlequin-int	LTR/ERV1	(5912)	984	263	2074932
371	26.9	20.6	3.0	chr2	112937238	112937440	(129256089)	C	MIR	SINE/MIR	(11)	251	4	2075981
20	3.8	3.7	0.0	chr2	113175336	113175362	(129018167)	+	(CT)n	Simple_repeat	1	28	(0)	2076370
16	5.3	0.0	0.0	chr2	113175362	113175381	(129018148)	+	(TG)n	Simple_repeat	1	20	(0)	2076371
271	35.9	1.5	12.0	chr2	113566606	113566830	(128626699)	C	L2b	LINE/L2	(2)	3385	3185	2076984
906	30.0	8.9	4.7	chr2	113567023	113567074	(128626455)	C	L2b	LINE/L2	(0)	3375	3318	2076985
758	24.3	0.0	1.1	chr2	113582330	113582508	(128611021)	C	MLT1A	LTR/ERVL-MaLR	(25)	349	173	2077012
66	8.9	0.0	2.0	chr2	113582509	113582607	(128610922)	+	(AG)n	Simple_repeat	1	99	(0)	2077013
764	18.1	4.3	0.0	chr2	113582614	113582768	(128610761)	C	MLT1A	LTR/ERVL-MaLR	(212)	162	1	2077012
2017	16.0	0.7	0.3	chr2	113770601	113770906	(128422623)	+	AluJb	SINE/Alu	1	307	(5)	2077294
1788	14.8	14.9	2.7	chr2	113770907	113771211	(128422318)	C	MSTB1	LTR/ERVL-MaLR	(65)	367	5	2077293
1869	22.9	3.8	0.7	chr2	113818360	113818768	(128374761)	+	MER76	LTR/ERVL	1	422	(269)	2077407
658	14.3	10.0	0.0	chr2	113818767	113818892	(128374637)	+	MER76	LTR/ERVL	552	691	(0)	2077407
459	20.6	5.6	1.0	chr2	113818898	113819000	(128374529)	+	L2a	LINE/L2	3315	3422	(4)	2077404
34	3.0	0.0	0.0	chr2	118633489	118633522	(123560007)	+	(CT)n	Simple_repeat	1	34	(0)	2084007
2638	14.9	2.6	0.0	chr2	118706358	118706774	(123486755)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2084125
23	7.0	0.0	0.0	chr2	118720138	118720167	(123473362)	+	(GA)n	Simple_repeat	1	30	(0)	2084145
1836	21.4	10.3	1.2	chr2	118772783	118772953	(123420576)	+	MLT1F2	LTR/ERVL-MaLR	2	186	(374)	2084226
50	5.7	0.0	0.0	chr2	118772954	118773009	(123420520)	+	(TC)n	Simple_repeat	1	56	(0)	2084227
1836	21.4	10.3	1.2	chr2	118773010	118773330	(123420199)	+	MLT1F2	LTR/ERVL-MaLR	187	544	(16)	2084226
36	0.0	0.0	0.0	chr2	118826345	118826375	(123367154)	+	(TC)n	Simple_repeat	1	31	(0)	2084318
1934	15.7	2.8	0.0	chr2	119363744	119364024	(122829505)	+	AluJb	SINE/Alu	1	289	(23)	2085204
66	14.2	3.2	0.8	chr2	119364026	119364151	(122829378)	+	GA-rich	Low_complexity	1	130	(0)	2085205
14	8.2	3.9	0.0	chr2	119364223	119364248	(122829281)	+	(AAAT)n	Simple_repeat	1	27	(0)	2085206
21	13.3	0.0	0.0	chr2	119387491	119387523	(122806006)	+	(TC)n	Simple_repeat	1	33	(0)	2085235
2096	13.3	0.7	3.2	chr2	119398132	119398447	(122795082)	C	AluSx1	SINE/Alu	(4)	308	1	2085258
15	0.0	5.3	0.0	chr2	119398519	119398537	(122794992)	+	(TC)n	Simple_repeat	1	20	(0)	2085259
20	12.4	0.0	0.0	chr2	119398539	119398573	(122794956)	+	(CACA)n	Simple_repeat	1	35	(0)	2085260
17	0.0	0.0	0.0	chr2	119628271	119628289	(122565240)	+	(TC)n	Simple_repeat	1	19	(0)	2085661
47	0.0	0.0	0.0	chr2	119628295	119628334	(122565195)	+	(GT)n	Simple_repeat	1	40	(0)	2085662
369	25.6	9.0	6.2	chr2	119628435	119628596	(122564933)	C	MIR	SINE/MIR	(22)	240	74	2085663
2174	15.2	0.0	0.0	chr2	121537110	121537406	(120656123)	+	AluJb	SINE/Alu	1	297	(15)	2088826
621	23.9	3.7	0.5	chr2	121537407	121537632	(120655897)	+	L1ME3B	LINE/L1	1282	1530	(4885)	2088819
25	3.5	0.0	0.0	chr2	121649464	121649493	(120544036)	+	(A)n	Simple_repeat	1	30	(0)	2089035
2572	11.7	1.6	11.8	chr2	121690013	121690432	(120503097)	C	MSTB	LTR/ERVL-MaLR	(0)	426	55	2089124
450	27.7	10.9	3.1	chr2	121776702	121776928	(120416601)	C	MamGypLTR2b	LTR/Gypsy	(0)	922	676	2089320
85	28.4	0.0	0.0	chr2	121776940	121777162	(120416367)	+	(GT)n	Simple_repeat	1	223	(0)	2089321
10001	21.7	5.1	2.5	chr2	121977758	121978656	(120214873)	C	L1ME1	LINE/L1	(188)	6389	5473	2089731
2019	14.4	3.1	7.5	chr2	121978657	121979055	(120214474)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2089732
1886	13.2	16.8	0.6	chr2	126644761	126645118	(115548411)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2096187
2248	22.0	7.8	4.4	chr2	126645119	126645313	(115548216)	+	LTR48B	LTR/ERV1	439	642	(2)	2096186
666	26.0	7.8	8.2	chr2	126658824	126659284	(115534245)	C	L1ME4b	LINE/L1	(367)	525	67	2096196
235	28.6	11.5	3.8	chr2	126659358	126659517	(115534012)	+	MIRb	SINE/MIR	3	176	(92)	2096197
60	0.0	0.0	0.0	chr2	126663951	126664001	(115529528)	+	(TC)n	Simple_repeat	1	51	(0)	2096203
34	5.5	0.0	0.0	chr2	126664952	126664989	(115528540)	+	(TC)n	Simple_repeat	1	38	(0)	2096206
24	6.6	0.0	0.0	chr2	127226576	127226607	(114966922)	+	(TC)n	Simple_repeat	1	32	(0)	2097082
16	0.0	0.0	0.0	chr2	127294420	127294437	(114899092)	+	(GA)n	Simple_repeat	1	18	(0)	2097200
2208	13.3	0.0	1.0	chr2	127294494	127294786	(114898743)	+	AluSz	SINE/Alu	1	290	(22)	2097201
1099	22.4	6.1	2.5	chr2	127561791	127562227	(114631302)	C	MLT1B	LTR/ERVL-MaLR	(12)	455	4	2097656
758	27.6	6.5	3.5	chr2	127958420	127958586	(114234943)	+	HAL1	LINE/L1	1384	1552	(955)	2098345
60	3.2	0.0	1.5	chr2	127958621	127958685	(114234844)	+	(GA)n	Simple_repeat	1	65	(0)	2098348
1436	20.4	4.4	0.0	chr2	127958689	127958948	(114234581)	C	AluJb	SINE/Alu	(39)	273	2	2098349
34	0.0	0.0	0.0	chr2	128183910	128183938	(114009591)	+	(GT)n	Simple_repeat	1	29	(0)	2098819
21	0.0	0.0	0.0	chr2	128183939	128183961	(114009568)	+	(AG)n	Simple_repeat	1	23	(0)	2098820
1528	12.7	0.4	0.4	chr2	128535866	128536093	(113657436)	+	AluSc8	SINE/Alu	74	301	(10)	2099357
743	29.2	7.7	3.2	chr2	128536102	128536448	(113657081)	+	LTR49-int	LTR/ERV1	790	1153	(6422)	2099356
727	27.8	10.2	2.4	chr2	134149765	134150052	(108043477)	C	LTR33A	LTR/ERVL	(123)	397	85	2107015
1107	21.1	4.7	18.6	chr2	134660897	134661374	(107532155)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	2107709
375	27.4	15.6	4.0	chr2	135048113	135048310	(107145219)	C	MIR	SINE/MIR	(0)	262	38	2108361
21	0.0	0.0	0.0	chr2	135048351	135048373	(107145156)	+	(AC)n	Simple_repeat	1	23	(0)	2108362
34	0.0	0.0	0.0	chr2	135048374	135048402	(107145127)	+	(CT)n	Simple_repeat	1	29	(0)	2108363
51	3.9	0.0	0.0	chr2	136031116	136031168	(106162361)	+	(AC)n	Simple_repeat	1	53	(0)	2110054
259	15.6	1.5	7.2	chr2	136031169	136031237	(106162292)	C	HERVFH21-int	LTR/ERV1	(6443)	86	22	2110055
14	16.8	5.0	0.0	chr2	138297068	138297107	(103896422)	+	(CTTCTCT)n	Simple_repeat	1	42	(0)	2113242
1109	26.8	5.9	5.2	chr2	144137192	144137577	(98055952)	C	Tigger15a	DNA/TcMar-Tigger	(135)	580	192	2120985
377	36.3	0.8	0.0	chr2	144137587	144137710	(98055819)	+	MIR3	SINE/MIR	24	148	(60)	2120986
26	17.2	0.0	3.6	chr2	144137713	144137768	(98055761)	+	GA-rich	Low_complexity	1	56	(0)	2120987
225	30.7	10.8	4.9	chr2	144137856	144138081	(98055448)	+	L2	LINE/L2	2002	2242	(1177)	2120988
60	4.8	0.0	0.0	chr2	144369612	144369676	(97823853)	+	(CT)n	Simple_repeat	1	65	(0)	2121337
51	0.0	0.0	0.0	chr2	144441165	144441208	(97752321)	+	(GA)n	Simple_repeat	1	44	(0)	2121423
44	2.4	0.0	0.0	chr2	144510688	144510729	(97682800)	+	(CT)n	Simple_repeat	1	42	(0)	2121488
23	17.1	5.7	0.0	chr2	144515739	144515791	(97677738)	+	(CA)n	Simple_repeat	1	56	(0)	2121491
21	0.0	0.0	0.0	chr2	144515798	144515820	(97677709)	+	(AG)n	Simple_repeat	1	23	(0)	2121492
1617	32.9	4.8	1.6	chr2	144738598	144739285	(97454244)	+	ERVL-E-int	LTR/ERVL	1084	1794	(3873)	2121800
470	34.2	6.7	0.9	chr2	144739357	144739429	(97454100)	+	ERVL-int	LTR/ERVL	4742	4826	(931)	2121801
42	0.0	0.0	0.0	chr2	144739430	144739465	(97454064)	+	(TC)n	Simple_repeat	1	36	(0)	2121802
470	34.2	6.7	0.9	chr2	144739466	144739615	(97453914)	+	ERVL-int	LTR/ERVL	4827	4979	(778)	2121801
34	11.8	0.0	0.0	chr2	144943494	144943548	(97249981)	+	(GAGA)n	Simple_repeat	1	55	(0)	2122032
14	15.6	0.0	0.0	chr2	145113833	145113861	(97079668)	+	G-rich	Low_complexity	1	29	(0)	2122263
47	0.0	0.0	0.0	chr2	145113867	145113906	(97079623)	+	(GA)n	Simple_repeat	1	40	(0)	2122264
55	3.7	0.0	0.0	chr2	145815796	145815851	(96377678)	+	(GA)n	Simple_repeat	1	56	(0)	2123143
26	23.9	2.6	1.2	chr2	145815852	145815929	(96377600)	+	GA-rich	Low_complexity	1	80	(0)	2123144
40	12.2	0.0	1.5	chr2	148102665	148102729	(94090800)	+	(AC)n	Simple_repeat	1	65	(0)	2126130
54	0.0	3.8	0.0	chr2	148102730	148102782	(94090747)	+	(AG)n	Simple_repeat	1	55	(0)	2126131
478	29.7	8.2	3.4	chr2	148623644	148623911	(93569618)	+	LTR33	LTR/ERVL	2	283	(232)	2126896
115	7.6	1.3	0.0	chr2	148623929	148624082	(93569447)	+	(TC)n	Simple_repeat	1	156	(0)	2126897
33	5.6	0.0	0.0	chr2	151176798	151176834	(91016695)	+	(TC)n	Simple_repeat	1	37	(0)	2130437
1114	31.2	15.3	1.7	chr2	151637977	151638696	(90554833)	+	L3	LINE/CR1	3216	4051	(48)	2131165
37	0.0	0.0	0.0	chr2	151638808	151638839	(90554690)	+	(TG)n	Simple_repeat	1	32	(0)	2131166
407	23.5	2.8	1.3	chr2	151657414	151657532	(90535997)	C	MER63B	DNA/hAT-Blackjack	(0)	436	313	2131193
248	23.2	0.0	1.8	chr2	151657535	151657591	(90535938)	C	MER63B	DNA/hAT-Blackjack	(352)	84	29	2131193
1775	18.8	0.0	0.3	chr2	151750416	151750697	(90442832)	+	AluJr4	SINE/Alu	2	282	(30)	2131286
54	0.0	0.0	0.0	chr2	151750720	151750765	(90442764)	+	(GA)n	Simple_repeat	1	46	(0)	2131287
48	3.5	0.0	0.0	chr2	152593836	152593860	(89599669)	+	(AG)n	Simple_repeat	1	25	(0)	2132668
50	0.0	0.0	0.0	chr2	152593861	152593903	(89599626)	+	(GT)n	Simple_repeat	1	43	(0)	2132669
48	3.5	0.0	0.0	chr2	152593904	152593937	(89599592)	+	(AG)n	Simple_repeat	2	35	(0)	2132670
17	4.9	0.0	0.0	chr2	156333341	156333361	(85860168)	+	(TC)n	Simple_repeat	1	21	(0)	2137289
50	0.0	3.7	1.8	chr2	157647021	157647074	(84546455)	+	(CT)n	Simple_repeat	1	56	(0)	2138998
394	30.9	1.2	5.3	chr2	157647211	157647381	(84546148)	C	MER117	DNA/hAT-Charlie	(31)	166	3	2138999
23	32.0	0.0	2.2	chr2	157876292	157876383	(84317146)	+	GA-rich	Low_complexity	1	92	(0)	2139335
30	0.0	3.5	0.0	chr2	158487775	158487803	(83705726)	+	(GA)n	Simple_repeat	1	30	(0)	2140194
17	11.2	0.0	0.0	chr2	158487807	158487836	(83705693)	+	(GGGA)n	Simple_repeat	1	30	(0)	2140195
24	0.0	0.0	0.0	chr2	159159692	159159717	(83033812)	+	(GT)n	Simple_repeat	1	26	(0)	2141195
51	0.0	0.0	0.0	chr2	159159718	159159761	(83033768)	+	(GA)n	Simple_repeat	1	44	(0)	2141196
765	19.7	0.0	1.5	chr2	159159875	159160006	(83033523)	+	FLAM_A	SINE/Alu	1	130	(12)	2141197
713	21.9	9.6	2.6	chr2	159265125	159265279	(82928250)	+	AluJb	SINE/Alu	120	286	(26)	2141339
36	0.0	2.9	0.0	chr2	159265285	159265318	(82928211)	+	(CA)n	Simple_repeat	1	35	(0)	2141340
23	7.2	0.0	0.0	chr2	159604933	159604962	(82588567)	+	(TG)n	Simple_repeat	1	30	(0)	2141857
246	16.7	0.0	0.0	chr2	159604983	159605018	(82588511)	C	AluJo	SINE/Alu	(30)	282	247	2141858
16	5.3	0.0	0.0	chr2	159605032	159605051	(82588478)	+	(GA)n	Simple_repeat	1	20	(0)	2141859
1708	16.4	2.9	2.9	chr2	159605054	159605334	(82588195)	C	AluJr	SINE/Alu	(30)	282	2	2141860
16	0.0	5.0	0.0	chr2	159616568	159616587	(82576942)	+	(TC)n	Simple_repeat	1	21	(0)	2141865
18	12.0	6.4	2.0	chr2	160013582	160013628	(82179901)	+	A-rich	Low_complexity	1	50	(0)	2142505
55	3.7	0.0	0.0	chr2	160013667	160013722	(82179807)	+	(CT)n	Simple_repeat	1	56	(0)	2142506
27	0.0	0.0	0.0	chr2	160013723	160013752	(82179777)	+	(GT)n	Simple_repeat	1	30	(0)	2142507
485	25.7	19.4	1.2	chr2	160013803	160013977	(82179552)	+	MIR	SINE/MIR	18	216	(46)	2142508
17	7.1	0.0	5.9	chr2	166155032	166155065	(76038464)	+	(GAGG)n	Simple_repeat	1	34	(0)	2150644
40	0.0	0.0	0.0	chr2	166155066	166155099	(76038430)	+	(GA)n	Simple_repeat	1	34	(0)	2150645
19	9.8	0.0	2.9	chr2	166376052	166376086	(75817443)	+	(CCCT)n	Simple_repeat	1	35	(0)	2150940
24	6.6	0.0	0.0	chr2	166376221	166376252	(75817277)	+	(GT)n	Simple_repeat	1	32	(0)	2150941
782	19.4	0.0	0.0	chr2	168357784	168357907	(73835622)	C	AluJo	SINE/Alu	(187)	125	2	2153449
24	3.3	3.2	0.0	chr2	168358086	168358116	(73835413)	+	(AG)n	Simple_repeat	1	32	(0)	2153450
415	24.6	8.8	6.5	chr2	168358163	168358352	(73835177)	C	MLT1K	LTR/ERVL-MaLR	(1)	594	400	2153451
1434	23.9	9.6	6.6	chr2	168434957	168435471	(73758058)	C	MLT1G3	LTR/ERVL-MaLR	(63)	532	1	2153545
21	10.5	0.0	0.0	chr2	168460974	168461004	(73732525)	+	(GA)n	Simple_repeat	1	31	(0)	2153589
1294	17.2	7.2	3.9	chr2	168476972	168477166	(73716363)	C	MLT1A0	LTR/ERVL-MaLR	(16)	349	152	2153614
57	1.9	0.0	0.0	chr2	168477167	168477219	(73716310)	+	(GA)n	Simple_repeat	1	53	(0)	2153615
1294	17.2	7.2	3.9	chr2	168477220	168477359	(73716170)	C	MLT1A0	LTR/ERVL-MaLR	(214)	151	2	2153614
532	26.0	13.0	5.9	chr2	168477388	168477926	(73715603)	C	L1ME4b	LINE/L1	(235)	657	75	2153616
4935	24.2	6.8	5.2	chr2	168488391	168490564	(73702965)	C	L1MC2	LINE/L1	(3824)	2322	124	2153629
244	15.2	0.0	7.8	chr2	168490689	168490752	(73702777)	C	L1MC2	LINE/L1	(6117)	125	67	2153629
979	23.9	2.2	6.3	chr2	168686047	168686381	(73507148)	C	MLT1B	LTR/ERVL-MaLR	(4)	386	66	2153914
16	8.1	0.0	0.0	chr2	168686400	168686425	(73507104)	+	(AATA)n	Simple_repeat	1	26	(0)	2153915
1119	31.2	6.2	5.1	chr2	168712683	168713172	(73480357)	+	L2a	LINE/L2	2929	3424	(2)	2153954
25	6.5	0.0	0.0	chr2	168807250	168807282	(73386247)	+	(AC)n	Simple_repeat	1	33	(0)	2154102
34	9.1	0.0	0.0	chr2	169137502	169137548	(73055981)	+	(AG)n	Simple_repeat	1	47	(0)	2154544
98	5.8	2.4	0.0	chr2	169361307	169361431	(72832098)	+	(TC)n	Simple_repeat	1	128	(0)	2154844
708	24.0	15.9	4.8	chr2	169664892	169665263	(72528266)	C	LTR52	LTR/ERVL	(0)	421	1	2155382
1586	13.8	1.4	10.7	chr2	169665299	169665502	(72528027)	C	AluJo	SINE/Alu	(24)	288	112	2155383
2403	15.5	7.8	0.2	chr2	169665503	169665916	(72527613)	C	MER83	LTR/ERV1	(0)	448	1	2155384
1782	16.7	25.9	3.6	chr2	169711625	169712096	(72481433)	C	LTR18B	LTR/ERVL	(0)	614	1	2155456
29	0.0	0.0	0.0	chr2	169733603	169733627	(72459902)	+	(CA)n	Simple_repeat	1	25	(0)	2155495
16	11.2	0.0	3.2	chr2	169827510	169827540	(72365989)	+	(GGC)n	Simple_repeat	1	31	(0)	2155681
936	26.2	14.9	4.3	chr2	170161907	170162376	(72031153)	+	MLT1K	LTR/ERVL-MaLR	3	531	(64)	2156223
18	0.0	0.0	0.0	chr2	170162379	170162398	(72031131)	+	(A)n	Simple_repeat	1	20	(0)	2156224
23	13.3	0.0	0.0	chr2	170238342	170238382	(71955147)	+	(CTCT)n	Simple_repeat	1	41	(0)	2156334
243	36.5	7.5	4.1	chr2	170238405	170238624	(71954905)	C	Tigger19b	DNA/TcMar-Tigger	(56)	494	267	2156335
20373	13.8	3.0	2.2	chr2	170253896	170260728	(71932801)	+	L1PA16	LINE/L1	1	8160	(1)	2156362
5953	13.0	5.4	3.3	chr2	170263304	170264250	(71929279)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2156370
1261	27.1	10.0	4.8	chr2	170264251	170264553	(71928976)	C	MLT1H1	LTR/ERVL-MaLR	(211)	344	3	2156369
337	16.7	3.6	0.0	chr2	170273934	170273987	(71919542)	+	MLT1M	LTR/ERVL-MaLR	232	287	(385)	2156382
49	24.7	0.0	0.0	chr2	170274090	170274203	(71919326)	+	GA-rich	Low_complexity	1	114	(0)	2156383
1520	20.5	7.1	2.5	chr2	170340431	170340611	(71852918)	C	MER39	LTR/ERV1	(0)	707	256	2156472
427	26.1	5.9	10.2	chr2	170340612	170340807	(71852722)	C	MER21A	LTR/ERVL	(570)	361	175	2156473
1520	20.5	7.1	2.5	chr2	170340808	170340907	(71852622)	C	MER39	LTR/ERV1	(0)	255	1	2156472
25865	14.6	3.8	4.3	chr2	170449807	170453409	(71740120)	C	HUERS-P1-int	LTR/ERV1	(1529)	4734	1107	2156651
51	0.0	0.0	0.0	chr2	170453410	170453453	(71740076)	+	(AC)n	Simple_repeat	1	44	(0)	2156653
25865	14.6	3.7	4.2	chr2	170453454	170454682	(71738847)	C	HUERS-P1-int	LTR/ERV1	(5012)	1251	1	2156651
308	30.7	4.1	3.5	chr2	170485218	170485386	(71708143)	C	L1ME3Cz	LINE/L1	(6)	918	749	2156708
41	0.0	0.0	0.0	chr2	170485387	170485421	(71708108)	+	(AC)n	Simple_repeat	1	35	(0)	2156709
25	15.4	0.0	0.0	chr2	170485422	170485464	(71708065)	+	GA-rich	Low_complexity	1	43	(0)	2156710
44	2.4	0.0	0.0	chr2	170861932	170861973	(71331556)	+	(TG)n	Simple_repeat	1	42	(0)	2157360
15	0.0	0.0	0.0	chr2	170861974	170861990	(71331539)	+	(AG)n	Simple_repeat	1	17	(0)	2157361
2121	10.0	0.4	0.4	chr2	170861991	170862269	(71331260)	C	AluSc	SINE/Alu	(30)	279	1	2157362
15	27.3	5.2	3.9	chr2	171160560	171160656	(71032873)	+	G-rich	Low_complexity	1	102	(0)	2157911
2487	16.2	4.0	0.0	chr2	171181437	171181849	(71011680)	C	MSTB1	LTR/ERVL-MaLR	(2)	430	1	2157957
181	37.7	11.6	0.0	chr2	171181864	171182062	(71011467)	+	L2c	LINE/L2	1069	1293	(2126)	2157958
46	0.0	0.0	0.0	chr2	171234403	171234441	(70959088)	+	(GA)n	Simple_repeat	1	39	(0)	2158073
35	0.0	0.0	2.4	chr2	171234442	171234478	(70959051)	+	(TG)n	Simple_repeat	1	37	(0)	2158074
897	13.2	1.4	1.4	chr2	171266957	171267101	(70926428)	+	MER34A	LTR/ERV1	5	149	(422)	2158147
875	14.5	0.0	0.8	chr2	171267102	171267218	(70926311)	+	AluJr	SINE/Alu	2	117	(195)	2158148
971	24.1	6.4	8.0	chr2	171267229	171267772	(70925757)	+	MER34A1	LTR/ERV1	100	580	(7)	2158149
1760	15.6	4.4	0.3	chr2	171566922	171567204	(70626325)	+	AluJr	SINE/Alu	6	300	(12)	2158661
828	28.1	7.5	7.2	chr2	171567205	171567261	(70626268)	+	MLT1G1	LTR/ERVL-MaLR	187	233	(346)	2158660
37	0.0	0.0	0.0	chr2	171567262	171567293	(70626236)	+	(TC)n	Simple_repeat	1	32	(0)	2158662
828	28.1	7.5	7.2	chr2	171567294	171567359	(70626170)	+	MLT1G1	LTR/ERVL-MaLR	234	288	(291)	2158660
2141	12.7	3.2	6.0	chr2	171567360	171567745	(70625784)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2158663
17	15.9	8.6	1.6	chr2	171894270	171894327	(70299202)	+	(GCGCGCC)n	Simple_repeat	1	63	(0)	2159210
1195	18.4	7.9	0.5	chr2	171937780	171938002	(70255527)	+	AluJr	SINE/Alu	41	281	(31)	2159304
60	0.0	0.0	0.0	chr2	171938025	171938075	(70255454)	+	(TC)n	Simple_repeat	1	51	(0)	2159305
855	15.8	0.0	1.6	chr2	171938110	171938236	(70255293)	+	AluJr4	SINE/Alu	1	125	(187)	2159306
41	23.7	3.7	2.1	chr2	172086006	172086141	(70107388)	+	G-rich	Low_complexity	1	141	(0)	2159582
763	32.2	6.4	3.8	chr2	173319954	173320459	(68873070)	C	L1MEb	LINE/L1	(1744)	835	43	2161479
61	0.0	0.0	0.0	chr2	173320642	173320693	(68872836)	+	(TC)n	Simple_repeat	1	52	(0)	2161480
2365	9.9	0.0	0.0	chr2	173320743	173321046	(68872483)	+	AluYm1	SINE/Alu	1	304	(7)	2161481
363	28.0	9.1	9.1	chr2	173868567	173868746	(68324783)	C	MLT1K	LTR/ERVL-MaLR	(6)	589	421	2162307
38	8.3	0.0	0.0	chr2	173868747	173868797	(68324732)	+	(CT)n	Simple_repeat	1	51	(0)	2162308
363	28.0	9.1	9.1	chr2	173868798	173868989	(68324540)	C	MLT1K	LTR/ERVL-MaLR	(175)	420	217	2162307
18	16.3	2.3	2.2	chr2	174211161	174211176	(67982353)	+	(CTCT)n	Simple_repeat	1	17	(0)	2162866
31	0.0	3.3	0.0	chr2	174211177	174211206	(67982323)	+	(CA)n	Simple_repeat	1	31	(0)	2162867
18	16.3	2.3	2.2	chr2	174211207	174211233	(67982296)	+	(CTCT)n	Simple_repeat	2	28	(0)	2162868
24	12.2	0.0	0.0	chr2	174547046	174547081	(67646448)	+	(GA)n	Simple_repeat	1	36	(0)	2163457
227	25.9	1.7	0.0	chr2	174547085	174547142	(67646387)	+	LTR78	LTR/ERV1	563	621	(683)	2163458
459	29.6	5.4	6.2	chr2	174547164	174547404	(67646125)	+	LTR78	LTR/ERV1	697	935	(369)	2163458
16	13.2	2.8	2.7	chr2	174599769	174599792	(67593737)	+	(AC)n	Simple_repeat	1	25	(0)	2163549
41	6.4	0.0	0.0	chr2	174599793	174599841	(67593688)	+	(CT)n	Simple_repeat	1	49	(0)	2163550
16	13.2	2.8	2.7	chr2	174599842	174599852	(67593677)	+	(AC)n	Simple_repeat	2	11	(0)	2163551
1854	13.2	5.6	1.4	chr2	174599882	174600173	(67593356)	C	MER1B	DNA/hAT-Charlie	(1)	338	34	2163552
49	2.0	2.0	0.0	chr2	174990214	174990263	(67203266)	+	(GT)n	Simple_repeat	1	51	(0)	2164130
25	35.6	1.0	0.0	chr2	174990264	174990366	(67203163)	+	GA-rich	Low_complexity	1	104	(0)	2164131
42	0.0	0.0	0.0	chr2	175142686	175142721	(67050808)	+	(AG)n	Simple_repeat	1	36	(0)	2164362
27	0.0	0.0	0.0	chr2	175142722	175142751	(67050778)	+	(TG)n	Simple_repeat	1	30	(0)	2164363
18	24.4	0.0	0.0	chr2	175142789	175142836	(67050693)	+	GA-rich	Low_complexity	1	48	(0)	2164364
19	4.3	0.0	0.0	chr2	175142836	175142859	(67050670)	+	(GT)n	Simple_repeat	1	24	(0)	2164365
1012	15.1	0.7	2.6	chr2	175142865	175143016	(67050513)	C	AluJr	SINE/Alu	(30)	282	134	2164366
2591	6.3	4.4	0.3	chr2	175170563	175170913	(67022616)	C	THE1C	LTR/ERVL-MaLR	(8)	367	2	2164414
13	22.0	2.3	2.2	chr2	175170915	175170958	(67022571)	+	(CTCTCC)n	Simple_repeat	1	45	(0)	2164415
24	3.1	2.9	2.8	chr2	175171157	175171191	(67022338)	+	(GT)n	Simple_repeat	1	36	(0)	2164416
30	4.9	2.3	0.0	chr2	175845715	175845726	(66347803)	+	(CA)n	Simple_repeat	1	12	(0)	2165311
36	2.9	0.0	0.0	chr2	175845727	175845761	(66347768)	+	(CT)n	Simple_repeat	1	35	(0)	2165312
30	4.9	2.3	0.0	chr2	175845762	175845791	(66347738)	+	(CA)n	Simple_repeat	1	31	(0)	2165313
54	17.1	0.0	0.0	chr2	176084663	176084762	(66108767)	+	GA-rich	Low_complexity	1	100	(0)	2165644
27	8.8	0.0	0.0	chr2	176891018	176891054	(65302475)	+	(TC)n	Simple_repeat	1	37	(0)	2166764
41	0.0	0.0	0.0	chr2	176891055	176891089	(65302440)	+	(CA)n	Simple_repeat	1	35	(0)	2166765
929	26.1	8.8	4.8	chr2	179898884	179899241	(62294288)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	2170789
49	13.4	4.0	1.0	chr2	179990524	179990623	(62202906)	+	GA-rich	Low_complexity	1	104	(0)	2170915
259	27.5	1.4	2.8	chr2	179990675	179990745	(62202784)	+	MER113	DNA/hAT-Charlie	136	205	(316)	2170916
38	2.8	0.0	0.0	chr2	180690867	180690903	(61502626)	+	(TG)n	Simple_repeat	1	37	(0)	2171788
19	23.7	2.5	4.8	chr2	183038303	183038383	(59155146)	+	(CAGCCCC)n	Simple_repeat	1	83	(0)	2174823
60	0.0	0.0	0.0	chr2	186532122	186532172	(55661357)	+	(GT)n	Simple_repeat	1	51	(0)	2179177
28	3.1	0.0	0.0	chr2	186532173	186532205	(55661324)	+	(AG)n	Simple_repeat	1	33	(0)	2179178
1759	13.7	2.8	3.9	chr2	186532206	186532490	(55661039)	C	AluJb	SINE/Alu	(30)	282	1	2179179
288	5.4	2.6	0.0	chr2	186849699	186849735	(55343794)	+	AluYa5	SINE/Alu	143	180	(131)	2179611
46	0.0	2.1	2.1	chr2	186849757	186849803	(55343726)	+	(TC)n	Simple_repeat	1	48	(0)	2179612
24	0.0	0.0	0.0	chr2	186849804	186849829	(55343700)	+	(GT)n	Simple_repeat	1	26	(0)	2179613
15	14.9	2.4	4.8	chr2	187003415	187003455	(55190074)	+	(CTG)n	Simple_repeat	1	42	(0)	2179844
15	0.0	0.0	0.0	chr2	187003474	187003490	(55190039)	+	(TC)n	Simple_repeat	1	17	(0)	2179845
14	21.8	0.0	0.0	chr2	187003491	187003506	(55190023)	+	(TTTTCT)n	Simple_repeat	2	34	(0)	2179846
405	23.4	8.1	8.7	chr2	187003664	187003836	(55189693)	C	L1MEf	LINE/L1	(5844)	796	625	2179842
2248	17.5	8.6	4.2	chr2	187218145	187218201	(54975328)	C	MLT2B4	LTR/ERVL	(0)	556	503	2180106
65	0.0	0.0	0.0	chr2	187218202	187218256	(54975273)	+	(AC)n	Simple_repeat	1	55	(0)	2180107
2248	17.5	8.6	4.2	chr2	187218257	187218728	(54974801)	C	MLT2B4	LTR/ERVL	(54)	502	1	2180106
6430	15.2	4.7	2.9	chr2	187256384	187256706	(54936823)	+	Tigger3b	DNA/TcMar-Tigger	933	1231	(0)	2180166
49	4.0	0.0	0.0	chr2	187256761	187256811	(54936718)	+	(CT)n	Simple_repeat	1	51	(0)	2180168
21	7.1	0.0	3.1	chr2	189094556	189094587	(53098942)	+	(TC)n	Simple_repeat	1	32	(0)	2182369
69	0.0	0.0	0.0	chr2	189094589	189094647	(53098882)	+	(AC)n	Simple_repeat	1	59	(0)	2182370
210	25.2	4.7	0.5	chr2	189094666	189094757	(53098772)	C	MIRc	SINE/MIR	(63)	167	73	2182371
47	0.0	0.0	0.0	chr2	190069137	190069176	(52124353)	+	(TG)n	Simple_repeat	1	40	(0)	2183784
22	0.0	0.0	0.0	chr2	190069177	190069200	(52124329)	+	(AG)n	Simple_repeat	1	24	(0)	2183785
17	25.1	5.6	0.0	chr2	191571327	191571380	(50622149)	+	(TC)n	Simple_repeat	1	57	(0)	2186072
22	13.4	3.9	1.9	chr2	191571383	191571433	(50622096)	+	(TTGTT)n	Simple_repeat	1	53	(0)	2186073
20801	8.5	1.7	3.3	chr2	191584256	191587357	(50606172)	+	HUERS-P1-int	LTR/ERV1	68	3117	(3146)	2186095
535	26.0	0.8	0.0	chr2	191618133	191618259	(50575270)	C	L1MEc	LINE/L1	(3689)	2630	2503	2186151
1157	24.1	15.9	8.7	chr2	191618266	191618715	(50574814)	+	MLT1F	LTR/ERVL-MaLR	1	489	(59)	2186152
1195	15.8	4.4	16.1	chr2	191756178	191756408	(50437121)	C	AluJr	SINE/Alu	(17)	295	112	2186371
51	0.0	0.0	0.0	chr2	191756409	191756452	(50437077)	+	(GA)n	Simple_repeat	1	44	(0)	2186372
1195	15.8	4.4	16.1	chr2	191756453	191756556	(50436973)	C	AluJr	SINE/Alu	(201)	111	1	2186371
852	25.1	8.2	7.7	chr2	191849156	191849698	(50343831)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	2	2186476
308	28.8	7.4	0.0	chr2	191849700	191849824	(50343705)	C	L1ME3G	LINE/L1	(36)	888	754	2186477
10109	6.5	8.1	3.6	chr2	193501469	193502973	(48690556)	C	LTR12C	LTR/ERV1	(0)	1579	3	2188537
4331	19.7	8.3	9.0	chr2	193502974	193503662	(48689867)	C	MER61-int	LTR/ERV1	(122)	5095	4389	2188536
22	0.0	0.0	0.0	chr2	195852892	195852915	(46340614)	+	(AC)n	Simple_repeat	1	24	(0)	2191567
39	2.7	0.0	0.0	chr2	195852916	195852953	(46340576)	+	(AG)n	Simple_repeat	1	38	(0)	2191568
240	7.7	9.3	0.0	chr2	195853049	195853087	(46340442)	C	MER57B2	LTR/ERV1	(66)	337	295	2191569
2503	15.9	18.0	6.9	chr2	196356320	196356940	(45836589)	+	MER44D	DNA/TcMar-Tigger	1	705	(0)	2192266
13	15.0	9.1	3.3	chr2	196926746	196926800	(45266729)	+	(GCGCCT)n	Simple_repeat	1	60	(0)	2193089
24	6.8	0.0	0.0	chr2	197212023	197212053	(44981476)	+	(CT)n	Simple_repeat	1	31	(0)	2193572
23	3.0	5.6	2.6	chr2	197212053	197212088	(44981441)	+	(CA)n	Simple_repeat	1	38	(0)	2193573
2108	10.9	0.0	0.3	chr2	197373678	197373960	(44819569)	C	AluSx	SINE/Alu	(30)	282	1	2193896
128	1.7	0.8	0.0	chr2	197374036	197374156	(44819373)	+	(TC)n	Simple_repeat	1	122	(0)	2193897
12	8.9	10.5	2.4	chr2	197675992	197676029	(44517500)	+	(CCTCT)n	Simple_repeat	1	42	(0)	2194467
58	19.3	0.8	0.8	chr2	197676041	197676169	(44517360)	+	GA-rich	Low_complexity	1	129	(0)	2194468
891	22.6	8.5	4.6	chr2	197685365	197685670	(44507859)	C	MER39	LTR/ERV1	(78)	629	311	2194486
19	11.6	0.0	0.0	chr2	197685680	197685708	(44507821)	+	(GA)n	Simple_repeat	1	29	(0)	2194487
5062	12.1	1.1	4.4	chr2	197685762	197685875	(44507654)	C	L1PB2	LINE/L1	(3)	6148	6036	2194488
1818	13.8	0.0	6.4	chr2	197918640	197918936	(44274593)	+	AluJb	SINE/Alu	1	278	(34)	2194781
37	0.0	0.0	0.0	chr2	197918937	197918968	(44274561)	+	(TC)n	Simple_repeat	1	32	(0)	2194782
17	5.0	0.0	0.0	chr2	197918972	197918992	(44274537)	+	(CA)n	Simple_repeat	1	21	(0)	2194783
1713	19.9	4.2	1.3	chr2	197918993	197919384	(44274145)	C	LTR37A	LTR/ERV1	(22)	404	1	2194784
1077	27.6	9.2	0.3	chr2	197969625	197969998	(44223531)	+	MLT1I	LTR/ERVL-MaLR	1	411	(0)	2194850
42	0.0	0.0	0.0	chr2	198055295	198055330	(44138199)	+	(CT)n	Simple_repeat	1	36	(0)	2194968
16	5.2	0.0	0.0	chr2	198055331	198055350	(44138179)	+	(GT)n	Simple_repeat	1	20	(0)	2194969
37	2.9	0.0	0.0	chr2	198055353	198055388	(44138141)	+	(GA)n	Simple_repeat	1	36	(0)	2194970
3687	12.6	3.9	0.3	chr2	198214029	198214626	(43978903)	+	Ricksha_c	DNA/MULE-MuDR	8	627	(1421)	2195198
1942	19.1	3.1	8.7	chr2	199744224	199744445	(42449084)	+	MLT1B	LTR/ERVL-MaLR	1	199	(191)	2197266
31	3.3	0.0	0.0	chr2	199744446	199744476	(42449053)	+	(AG)n	Simple_repeat	1	31	(0)	2197267
1942	19.1	3.1	8.7	chr2	199744477	199744667	(42448862)	+	MLT1B	LTR/ERVL-MaLR	200	390	(0)	2197266
4841	2.5	0.2	0.2	chr2	201126038	201126595	(41066934)	C	LTR6B	LTR/ERV1	(0)	558	1	2199587
480	27.2	16.2	1.4	chr2	201126596	201126815	(41066714)	+	LTR67B	LTR/ERVL	338	596	(24)	2199588
35	0.0	0.0	0.0	chr2	202032453	202032482	(40161047)	+	(TG)n	Simple_repeat	1	30	(0)	2201076
26	4.5	10.9	0.0	chr2	202032483	202032528	(40161001)	+	GA-rich	Low_complexity	1	51	(0)	2201077
65	1.7	0.0	0.0	chr2	202393875	202393934	(39799595)	+	(GA)n	Simple_repeat	1	60	(0)	2201896
38	6.0	0.0	0.0	chr2	202654052	202654103	(39539426)	+	(AGAG)n	Simple_repeat	1	52	(0)	2202460
20	10.8	0.0	0.0	chr2	202654097	202654126	(39539403)	+	(GT)n	Simple_repeat	1	30	(0)	2202461
4131	21.0	9.1	10.9	chr2	202655455	202655700	(39537829)	C	L1MEf	LINE/L1	(2391)	4153	3916	2202464
67	1.6	0.0	0.0	chr2	202655701	202655762	(39537767)	+	(AG)n	Simple_repeat	1	62	(0)	2202465
4321	21.0	9.1	10.9	chr2	202655763	202655784	(39537745)	C	L1MEf	LINE/L1	(2629)	3915	3893	2202464
683	12.3	1.9	0.0	chr2	202655785	202655890	(39537639)	C	HY1	scRNA	(5)	114	7	2202466
4321	21.0	9.1	10.9	chr2	202655891	202657083	(39536446)	C	L1MEf	LINE/L1	(2629)	3892	2614	2202464
54	3.7	0.0	0.0	chr2	203713835	203713889	(38479640)	+	(GA)n	Simple_repeat	1	55	(0)	2204520
15	0.0	0.0	0.0	chr2	203713890	203713906	(38479623)	+	(TG)n	Simple_repeat	1	17	(0)	2204521
51	0.0	0.0	0.0	chr2	204459485	204459528	(37734001)	+	(TC)n	Simple_repeat	1	44	(0)	2205651
1425	20.9	10.4	3.1	chr2	204562971	204563217	(37630312)	C	MLT1C	LTR/ERVL-MaLR	(7)	460	189	2205812
62	1.7	1.6	0.0	chr2	204563218	204563278	(37630251)	+	(TC)n	Simple_repeat	1	62	(0)	2205813
1425	20.9	10.4	3.1	chr2	204563279	204563455	(37630074)	C	MLT1C	LTR/ERVL-MaLR	(279)	188	2	2205812
55	0.0	0.0	0.0	chr2	204953421	204953467	(37240062)	+	(AG)n	Simple_repeat	1	47	(0)	2206288
190	32.8	1.5	0.0	chr2	207269683	207269746	(34923783)	+	MIRb	SINE/MIR	86	150	(118)	2209765
15	16.6	0.0	0.0	chr2	207269879	207269905	(34923624)	+	GA-rich	Low_complexity	1	27	(0)	2209766
191	22.8	1.7	3.4	chr2	207772208	207772266	(34421263)	C	AmnSINE1	SINE/5S-Deu-L2	(215)	360	303	2210640
4667	8.7	0.3	2.9	chr2	207772280	207772811	(34420718)	+	MER41B	LTR/ERV1	1	523	(111)	2210641
1830	17.1	11.0	2.1	chr2	215532867	215533255	(26660274)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2221242
45	6.0	0.0	0.0	chr2	215974802	215974853	(26218676)	+	(AC)n	Simple_repeat	1	52	(0)	2221934
23	17.4	0.0	0.0	chr2	215974854	215974899	(26218630)	+	(TCTCTC)n	Simple_repeat	1	46	(0)	2221935
19	9.1	5.4	2.6	chr2	215975000	215975036	(26218493)	+	(TA)n	Simple_repeat	1	39	(0)	2221936
23	3.7	0.0	0.0	chr2	215994878	215994905	(26198624)	+	(GA)n	Simple_repeat	1	28	(0)	2221961
195	34.6	4.9	0.0	chr2	216187709	216187786	(26005743)	+	L2b	LINE/L2	2065	2146	(1273)	2222312
32	0.0	0.0	0.0	chr2	216187787	216187821	(26005708)	+	(AC)n	Simple_repeat	1	35	(0)	2222313
56	5.8	1.4	1.3	chr2	216187822	216187895	(26005634)	+	(CT)n	Simple_repeat	1	75	(0)	2222314
17	20.8	4.5	0.0	chr2	216617085	216617128	(25576401)	+	GA-rich	Low_complexity	1	46	(0)	2223120
50	0.0	0.0	0.0	chr2	216631588	216631630	(25561899)	+	(TC)n	Simple_repeat	1	43	(0)	2223154
26	0.0	0.0	0.0	chr2	216631631	216631659	(25561870)	+	(GT)n	Simple_repeat	1	29	(0)	2223155
2072	9.5	0.0	3.4	chr2	216631660	216631955	(25561574)	C	AluSx	SINE/Alu	(26)	286	1	2223156
17	13.1	0.0	0.0	chr2	216799908	216799933	(25393596)	+	(GA)n	Simple_repeat	1	26	(0)	2223452
33	0.0	0.0	0.0	chr2	216799937	216799964	(25393565)	+	(TG)n	Simple_repeat	1	28	(0)	2223453
23	10.0	0.0	0.0	chr2	217362751	217362783	(24830746)	+	(CT)n	Simple_repeat	1	33	(0)	2224282
25	9.2	0.0	0.0	chr2	217432196	217432230	(24761299)	+	(CT)n	Simple_repeat	1	35	(0)	2224385
22	12.8	0.0	0.0	chr2	217432230	217432263	(24761266)	+	(CA)n	Simple_repeat	1	34	(0)	2224386
592	8.8	0.0	1.2	chr2	217432297	217432377	(24761152)	+	MADE1	DNA/TcMar-Mariner	1	80	(0)	2224387
38	0.0	0.0	0.0	chr2	217804257	217804289	(24389240)	+	(TC)n	Simple_repeat	1	33	(0)	2224983
339	32.1	10.2	7.3	chr2	217855176	217855545	(24337984)	+	L2c	LINE/L2	2921	3302	(85)	2225051
30	3.5	0.0	0.0	chr2	217855557	217855586	(24337943)	+	(TC)n	Simple_repeat	1	30	(0)	2225052
271	33.0	7.4	0.0	chr2	217855601	217855688	(24337841)	C	MER91C	DNA/hAT-Tip100	(44)	96	2	2225053
232	26.6	13.8	0.0	chr2	217980456	217980506	(24213023)	+	L2b	LINE/L2	3259	3324	(51)	2225275
47	0.0	0.0	0.0	chr2	217980507	217980546	(24212983)	+	(AG)n	Simple_repeat	1	40	(0)	2225276
232	26.6	13.8	0.0	chr2	217980547	217980588	(24212941)	+	L2b	LINE/L2	3325	3366	(9)	2225275
36	0.0	0.0	0.0	chr2	218357260	218357290	(23836239)	+	(TC)n	Simple_repeat	1	31	(0)	2225940
1002	18.9	5.6	0.0	chr2	218945002	218945170	(23248359)	+	AluJb	SINE/Alu	131	309	(3)	2227092
584	29.2	8.3	4.8	chr2	218945273	218945632	(23247897)	+	L1ME3D	LINE/L1	4788	5183	(963)	2227093
43	18.8	6.0	2.1	chr2	218967990	218968124	(23225405)	+	A-rich	Low_complexity	1	140	(0)	2227132
1706	17.0	0.6	5.8	chr2	219255039	219255230	(22938299)	C	AluJo	SINE/Alu	(0)	312	137	2227584
21	6.8	0.0	0.0	chr2	219514387	219514417	(22679112)	+	(CGCT)n	Simple_repeat	1	31	(0)	2228053
15	21.4	0.0	0.0	chr2	219514495	219514532	(22678997)	+	(AGCAGC)n	Simple_repeat	1	38	(0)	2228054
17	12.3	0.0	5.1	chr2	219520282	219520320	(22673209)	+	(CCCTC)n	Simple_repeat	1	39	(0)	2228065
2339	9.5	0.0	4.3	chr2	219685744	219686069	(22507460)	C	AluSx	SINE/Alu	(0)	312	1	2228330
44	6.4	3.0	1.4	chr2	219686139	219686205	(22507324)	+	(TC)n	Simple_repeat	1	69	(0)	2228331
43	4.5	0.0	0.0	chr2	222313114	222313159	(19880370)	+	(GT)n	Simple_repeat	1	46	(0)	2232398
29	0.0	0.0	0.0	chr2	222313161	222313185	(19880344)	+	(AG)n	Simple_repeat	1	25	(0)	2232399
553	23.5	1.7	7.1	chr2	222313358	222313540	(19879989)	+	MER5B	DNA/hAT-Charlie	2	174	(4)	2232400
38	0.0	0.0	0.0	chr2	222605162	222605194	(19588335)	+	(TC)n	Simple_repeat	1	33	(0)	2232843
2409	7.4	0.8	4.4	chr2	227377637	227378003	(14815526)	+	L1PA13	LINE/L1	5807	6160	(3)	2240357
18	4.7	0.0	0.0	chr2	227378061	227378082	(14815447)	+	(CT)n	Simple_repeat	1	22	(0)	2240358
24	6.8	0.0	0.0	chr2	227378084	227378114	(14815415)	+	(AC)n	Simple_repeat	1	31	(0)	2240359
214	28.1	9.3	1.4	chr2	227378194	227378312	(14815217)	C	MIRb	SINE/MIR	(66)	164	35	2240360
21	0.0	0.0	0.0	chr2	229753996	229754018	(12439511)	+	(AC)n	Simple_repeat	1	23	(0)	2244046
40	6.2	0.0	0.0	chr2	229754018	229754068	(12439461)	+	(AG)n	Simple_repeat	1	51	(0)	2244047
320	29.5	2.7	4.6	chr2	229754104	229754273	(12439256)	+	MIRb	SINE/MIR	40	212	(56)	2244048
51	0.0	0.0	0.0	chr2	229864005	229864048	(12329481)	+	(AG)n	Simple_repeat	1	44	(0)	2244193
27	0.0	0.0	0.0	chr2	229864049	229864078	(12329451)	+	(TG)n	Simple_repeat	1	30	(0)	2244194
1537	25.0	11.3	4.4	chr2	229864105	229864782	(12328747)	C	Tigger9a	DNA/TcMar-Tigger	(0)	732	2	2244195
72	11.8	2.5	0.0	chr2	230224426	230224547	(11968982)	+	(AGAG)n	Simple_repeat	1	125	(0)	2244909
36	6.8	0.0	0.0	chr2	230864697	230864743	(11328786)	+	(TGAG)n	Simple_repeat	1	47	(0)	2245825
16	20.2	5.3	5.1	chr2	230864784	230864858	(11328671)	+	(GGCGC)n	Simple_repeat	1	79	(0)	2245826
19	18.7	0.0	4.3	chr2	230932868	230932913	(11260616)	+	(CT)n	Simple_repeat	1	46	(0)	2245928
73	3.3	10.3	0.7	chr2	230943004	230943129	(11250400)	+	(AG)n	Simple_repeat	1	139	(0)	2245940
399	20.1	3.2	1.1	chr2	232551134	232551224	(9642305)	+	MIRb	SINE/MIR	104	202	(66)	2248838
73	0.0	1.5	0.0	chr2	233054844	233054909	(9138620)	+	(AG)n	Simple_repeat	1	67	(0)	2249810
1165	23.8	5.3	2.7	chr2	233225405	233225733	(8967796)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	242	2250136
88	8.5	0.0	2.3	chr2	233225738	233225868	(8967661)	+	(GA)n	Simple_repeat	1	131	(0)	2250137
651	25.2	11.1	0.6	chr2	233225875	233226075	(8967454)	C	MLT1G1	LTR/ERVL-MaLR	(339)	221	1	2250136
31	7.2	2.3	0.0	chr2	233974870	233974913	(8218616)	+	(AG)n	Simple_repeat	1	45	(0)	2251204
15	19.4	0.0	2.6	chr2	235171672	235171684	(7021845)	+	(CT)n	Simple_repeat	1	13	(0)	2253147
33	5.6	0.0	0.0	chr2	235171685	235171721	(7021808)	+	(TG)n	Simple_repeat	1	37	(0)	2253148
15	19.4	0.0	2.6	chr2	235171722	235171745	(7021784)	+	(CT)n	Simple_repeat	2	24	(0)	2253149
435	27.5	9.6	3.4	chr2	235171808	235171954	(7021575)	C	MLT1M	LTR/ERVL-MaLR	(424)	248	92	2253150
2179	14.4	7.7	2.5	chr2	235394212	235394616	(6798913)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2253531
1407	21.9	3.7	3.0	chr2	235522948	235523318	(6670211)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	2253775
193	31.6	3.4	0.0	chr2	236683311	236683367	(5510162)	C	MIR1_Amn	SINE/MIR	(141)	89	31	2255339
18	24.1	5.5	0.0	chr2	236683420	236683474	(5510055)	+	(CT)n	Simple_repeat	1	58	(0)	2255340
28	16.9	7.3	0.0	chr2	237892732	237892799	(4300730)	+	(CT)n	Simple_repeat	1	73	(0)	2257005
891	26.6	2.4	0.0	chr2	239504883	239505085	(2688444)	C	MER63A	DNA/hAT-Blackjack	(0)	210	3	2258995
22	26.2	3.3	2.1	chr2	239505204	239505298	(2688231)	+	(GTGAGA)n	Simple_repeat	1	96	(0)	2258996
509	23.9	4.5	4.2	chr2	240200218	240200534	(1992995)	+	MLT1F2	LTR/ERVL-MaLR	2	591	(0)	2259806
440	30.9	1.6	0.4	chr2	240565546	240565713	(1627816)	C	ERVL-E-int	LTR/ERVL	(834)	4833	4500	2260177
32	9.5	0.0	0.0	chr2	240766705	240766749	(1426780)	+	(TC)n	Simple_repeat	1	45	(0)	2260356
43	0.0	0.0	0.0	chr2	240766750	240766786	(1426743)	+	(CA)n	Simple_repeat	1	37	(0)	2260357
16	0.0	0.0	0.0	chr20	102592	102609	(64341558)	+	(TC)n	Simple_repeat	1	18	(0)	2262253
62	0.0	0.0	0.0	chr20	102610	102662	(64341505)	+	(TG)n	Simple_repeat	1	53	(0)	2262254
1577	17.4	8.4	5.4	chr20	102725	103149	(64341018)	C	L1M4	LINE/L1	(870)	5276	4838	2262255
25	15.1	1.8	3.6	chr20	258361	258415	(64185752)	+	GA-rich	Low_complexity	1	56	(0)	2262487
210	32.3	13.8	1.5	chr20	266606	266941	(64177226)	C	L2a	LINE/L2	(133)	3293	2910	2262508
306	23.8	0.0	7.7	chr20	373083	373173	(64070994)	C	MIR	SINE/MIR	(0)	262	179	2262788
1123	17.4	0.0	0.0	chr20	373199	373365	(64070802)	+	AluJb	SINE/Alu	137	303	(9)	2262789
16	8.3	0.0	0.0	chr20	373367	373392	(64070775)	+	(GGAA)n	Simple_repeat	1	26	(0)	2262790
324	31.9	8.0	0.7	chr20	373418	373556	(64070611)	C	MIR	SINE/MIR	(85)	177	28	2262788
2101	15.7	8.5	3.7	chr20	415676	416078	(64028089)	C	MSTA	LTR/ERVL-MaLR	(0)	428	5	2262895
1236	21.6	10.5	2.5	chr20	416079	416147	(64028020)	C	L1MC5a	LINE/L1	(544)	2233	2152	2262893
2141	10.5	2.7	1.0	chr20	526674	526967	(63917200)	+	AluSx3	SINE/Alu	1	299	(12)	2263118
73	4.1	0.0	0.0	chr20	526969	527044	(63917123)	+	(GA)n	Simple_repeat	1	76	(0)	2263119
534	18.3	14.5	0.7	chr20	527110	527252	(63916915)	+	L1M5	LINE/L1	3275	3440	(2706)	2263112
1194	26.2	9.4	5.8	chr20	625311	625841	(63818326)	+	MLT1H1	LTR/ERVL-MaLR	4	555	(0)	2263360
323	25.0	1.3	0.0	chr20	625845	625920	(63818247)	+	L1M5	LINE/L1	5611	5687	(507)	2263359
51	0.0	0.0	0.0	chr20	743122	743165	(63701002)	+	(TC)n	Simple_repeat	1	44	(0)	2263660
27	0.0	0.0	0.0	chr20	743166	743195	(63700972)	+	(AC)n	Simple_repeat	1	30	(0)	2263661
2123	5.5	6.3	3.1	chr20	818790	819081	(63625086)	C	AluY	SINE/Alu	(9)	302	1	2263795
76	21.7	2.2	0.5	chr20	819239	819417	(63624750)	+	(TCTC)n	Simple_repeat	1	182	(0)	2263796
314	35.2	0.0	0.9	chr20	2300915	2301023	(62143144)	C	MIRc	SINE/MIR	(70)	198	91	2266693
15	9.1	4.2	0.0	chr20	2301179	2301202	(62142965)	+	(AG)n	Simple_repeat	1	25	(0)	2266694
193	26.6	6.8	8.4	chr20	2301330	2301448	(62142719)	+	MIR3	SINE/MIR	44	160	(48)	2266695
1789	26.5	11.1	2.0	chr20	2349069	2349264	(62094903)	+	MLT1G3	LTR/ERVL-MaLR	1	221	(374)	2266789
69	0.0	0.0	0.0	chr20	2349265	2349323	(62094844)	+	(CT)n	Simple_repeat	1	59	(0)	2266790
1789	26.5	11.1	2.0	chr20	2349324	2349666	(62094501)	+	MLT1G3	LTR/ERVL-MaLR	222	595	(0)	2266789
206	15.2	0.0	0.0	chr20	2873164	2873196	(61570971)	+	MIRc	SINE/MIR	121	153	(115)	2267730
1737	16.3	4.0	0.0	chr20	3981837	3982100	(60462067)	+	AluJb	SINE/Alu	1	275	(37)	2269889
37	0.0	0.0	0.0	chr20	3982104	3982135	(60462032)	+	(TC)n	Simple_repeat	1	32	(0)	2269890
349	27.5	8.7	5.6	chr20	3982145	3982216	(60461951)	C	L1M5	LINE/L1	(1524)	4622	4558	2269887
1300	20.5	8.1	8.8	chr20	3982217	3982295	(60461872)	+	MSTD	LTR/ERVL-MaLR	1	78	(318)	2269891
1029	20.1	0.0	2.1	chr20	4869153	4869341	(59574826)	+	FAM	SINE/Alu	1	185	(0)	2271485
16	5.3	0.0	0.0	chr20	4869406	4869425	(59574742)	+	(A)n	Simple_repeat	1	20	(0)	2271486
19	4.3	0.0	0.0	chr20	4869464	4869495	(59574672)	+	(CT)n	Simple_repeat	1	32	(0)	2271487
18	0.0	0.0	0.0	chr20	4869541	4869560	(59574607)	+	(AC)n	Simple_repeat	1	20	(0)	2271488
888	25.6	9.8	6.8	chr20	5817095	5817432	(58626735)	C	L1MEc	LINE/L1	(1460)	1292	678	2273361
48	0.0	0.0	0.0	chr20	5817433	5817473	(58626694)	+	(TG)n	Simple_repeat	1	41	(0)	2273363
275	9.1	0.0	0.0	chr20	5817474	5817506	(58626661)	C	AluYk11	SINE/Alu	(278)	33	1	2273364
888	27.3	10.4	13.6	chr20	5817507	5818048	(58626119)	C	L1MEc	LINE/L1	(5723)	677	100	2273361
320	15.4	2.1	13.3	chr20	6055105	6055209	(58388958)	+	L1ME4a	LINE/L1	5977	6069	(55)	2273776
150	8.0	2.3	0.0	chr20	8018261	8018528	(56425639)	+	(GA)n	Simple_repeat	1	274	(0)	2276652
51	14.0	1.1	1.1	chr20	9108856	9108944	(55335223)	+	GA-rich	Low_complexity	1	90	(0)	2278405
2614	14.8	6.1	0.2	chr20	18843265	18843665	(45600502)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2293332
30	0.0	0.0	0.0	chr20	21141799	21141824	(43302343)	+	(AC)n	Simple_repeat	1	26	(0)	2296662
27	10.7	0.0	0.0	chr20	21141825	21141864	(43302303)	+	(TC)n	Simple_repeat	1	40	(0)	2296663
125	13.6	1.5	0.0	chr20	22513109	22513314	(41930853)	+	(CT)n	Simple_repeat	1	209	(0)	2298512
18	12.3	3.1	9.1	chr20	22584365	22584428	(41859739)	+	(CCCT)n	Simple_repeat	1	66	(0)	2298601
12	21.2	6.2	4.3	chr20	22584428	22584492	(41859675)	+	G-rich	Low_complexity	1	69	(0)	2298602
63	7.9	1.1	1.0	chr20	22584622	22584716	(41859451)	+	(GGA)n	Simple_repeat	1	96	(0)	2298603
532	22.8	0.5	0.2	chr20	29307771	29308553	(35135614)	+	GA-rich	Low_complexity	1	786	(0)	2303966
2368	8.4	0.0	0.0	chr20	29308554	29308852	(35135315)	+	AluY	SINE/Alu	3	301	(10)	2303967
678	23.5	0.4	0.2	chr20	29754213	29755074	(34689093)	+	GA-rich	Low_complexity	1	864	(0)	2304506
2421	7.4	0.0	0.0	chr20	29755075	29755373	(34688794)	+	AluY	SINE/Alu	3	301	(10)	2304507
2491	8.4	0.0	0.0	chr20	30910546	30910853	(33533314)	C	AluY	SINE/Alu	(1)	310	3	2305598
319	18.1	5.1	4.7	chr20	30910855	30911069	(33533098)	C	HERVIP10FH-int	LTR/ERV1	(4105)	997	782	2305599
177	23.6	0.2	0.0	chr20	30911071	30911470	(33532697)	+	(TCTC)n	Simple_repeat	1	401	(0)	2305600
502	23.0	6.7	3.9	chr20	31486139	31486345	(32957822)	C	L2a	LINE/L2	(1)	3425	3171	2306072
260	23.0	3.3	11.2	chr20	31486293	31486390	(32957777)	C	MIR3	SINE/MIR	(0)	208	119	2306073
80	1.4	0.0	0.0	chr20	31486393	31486465	(32957702)	+	(GA)n	Simple_repeat	1	73	(0)	2306074
14	13.4	6.1	0.0	chr20	31573028	31573060	(32871107)	+	GA-rich	Low_complexity	1	35	(0)	2306294
197	21.6	0.0	0.0	chr20	31606766	31606802	(32837365)	C	MER5A	DNA/hAT-Charlie	(24)	165	129	2306392
195	30.2	5.5	2.3	chr20	31606870	31606957	(32837210)	C	MIR3	SINE/MIR	(50)	158	68	2306393
300	28.4	11.4	1.8	chr20	31640801	31640911	(32803256)	C	L2b	LINE/L2	(0)	3375	3253	2306489
16	4.8	0.0	0.0	chr20	31640936	31640954	(32803213)	+	(TC)n	Simple_repeat	1	19	(0)	2306490
48	0.0	0.0	0.0	chr20	31640955	31640995	(32803172)	+	(AC)n	Simple_repeat	1	41	(0)	2306491
1025	4.9	7.7	0.0	chr20	31641036	31641179	(32802988)	+	L1PA4	LINE/L1	5997	6152	(3)	2306492
2115	9.7	5.1	0.0	chr20	31669459	31669737	(32774430)	C	AluSx1	SINE/Alu	(18)	294	1	2306583
242	21.4	16.5	2.0	chr20	31669741	31669840	(32774327)	+	L2a	LINE/L2	3252	3385	(41)	2306578
190	25.0	4.8	0.0	chr20	31669840	31669879	(32774288)	C	L2a	LINE/L2	(10)	3416	3375	2306584
309	31.2	19.6	1.1	chr20	31669847	31670024	(32774143)	C	MIR	SINE/MIR	(13)	249	31	2306585
1002	25.5	0.9	0.9	chr20	31676226	31676447	(32767720)	C	MIR	SINE/MIR	(24)	238	17	2306602
370	29.8	6.5	6.5	chr20	31676797	31676965	(32767202)	C	L3	LINE/CR1	(99)	4000	3832	2306603
398	20.4	2.9	14.3	chr20	31677143	31677182	(32766985)	+	MIR	SINE/MIR	127	150	(112)	2306604
220	24.6	14.3	3.7	chr20	31679316	31679455	(32764712)	C	MIR3	SINE/MIR	(32)	198	37	2306609
417	32.7	5.1	0.2	chr20	31679454	31679664	(32764503)	+	MIRb	SINE/MIR	35	267	(1)	2306610
46	0.0	2.3	0.0	chr20	31846443	31846485	(32597682)	+	(AG)n	Simple_repeat	1	44	(0)	2307004
46	2.2	0.0	0.0	chr20	32277699	32277744	(32166423)	+	(CGC)n	Simple_repeat	1	46	(0)	2308087
346	27.5	10.0	0.6	chr20	32278032	32278210	(32165957)	+	MIRc	SINE/MIR	22	221	(47)	2308088
483	27.2	1.9	4.7	chr20	33262165	33262376	(31181791)	+	MER113	DNA/hAT-Charlie	29	234	(287)	2310289
43	4.0	0.0	0.0	chr20	33262378	33262429	(31181738)	+	(AG)n	Simple_repeat	1	52	(0)	2310290
443	29.7	6.3	2.0	chr20	33262452	33262695	(31181472)	+	MER113	DNA/hAT-Charlie	263	517	(4)	2310291
17	18.9	2.5	2.4	chr20	33562324	33562385	(30881782)	+	GA-rich	Low_complexity	1	62	(0)	2311081
619	25.7	7.2	0.0	chr20	33759587	33759757	(30684410)	+	MER113	DNA/hAT-Charlie	44	229	(292)	2311527
43	4.5	0.0	0.0	chr20	33759758	33759803	(30684364)	+	(GA)n	Simple_repeat	1	46	(0)	2311528
619	25.7	7.2	0.0	chr20	33759804	33759849	(30684318)	+	MER113	DNA/hAT-Charlie	230	277	(244)	2311527
916	20.6	7.0	3.4	chr20	33759851	33760056	(30684111)	C	MER20	DNA/hAT-Charlie	(0)	219	6	2311529
2909	11.6	1.2	1.4	chr20	33779001	33779429	(30664738)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2311590
21	26.9	2.1	4.1	chr20	33811432	33811456	(30632711)	+	(GCGGAG)n	Simple_repeat	4	28	(0)	2311674
72	0.0	0.0	0.0	chr20	36188582	36188642	(28255525)	+	(AC)n	Simple_repeat	1	61	(0)	2317057
25	0.0	3.3	0.0	chr20	36188643	36188672	(28255495)	+	(GA)n	Simple_repeat	1	31	(0)	2317058
1072	10.0	0.7	0.0	chr20	36188698	36188837	(28255330)	+	AluSx	SINE/Alu	1	141	(171)	2317059
13	21.2	2.6	0.0	chr20	36232715	36232752	(28211415)	+	(CTCTGTG)n	Simple_repeat	1	39	(0)	2317147
52	3.6	1.8	0.0	chr20	36232812	36232868	(28211299)	+	(CT)n	Simple_repeat	1	58	(0)	2317148
610	31.6	11.5	2.3	chr20	36232945	36233330	(28210837)	C	L2a	LINE/L2	(5)	3421	2996	2317149
135	3.4	2.0	0.7	chr20	36466913	36467064	(27977103)	+	(TC)n	Simple_repeat	1	155	(0)	2317698
219	38.0	2.7	1.8	chr20	36467084	36467193	(27976974)	C	L2b	LINE/L2	(35)	3340	3230	2317699
255	32.4	1.8	2.6	chr20	37289861	37289974	(27154193)	C	MIR3	SINE/MIR	(77)	131	19	2319673
762	22.6	20.5	3.0	chr20	37299975	37300588	(27143579)	+	L2a	LINE/L2	2671	3424	(2)	2319699
22	0.0	0.0	0.0	chr20	37412621	37412644	(27031523)	+	(TG)n	Simple_repeat	1	24	(0)	2319981
18	0.0	0.0	0.0	chr20	37412644	37412663	(27031504)	+	(GA)n	Simple_repeat	1	20	(0)	2319982
42	0.0	0.0	0.0	chr20	37412671	37412706	(27031461)	+	(TG)n	Simple_repeat	1	36	(0)	2319983
19	0.0	0.0	0.0	chr20	37412831	37412851	(27031316)	+	(TG)n	Simple_repeat	1	21	(0)	2319984
48	24.4	0.7	2.9	chr20	37912801	37912937	(26531230)	+	(CT)n	Simple_repeat	1	138	(0)	2321040
7589	14.7	6.4	8.7	chr20	38029007	38029691	(26414476)	+	L1MDa	LINE/L1	3077	3734	(2803)	2321277
2142	12.5	17.5	0.3	chr20	38029692	38030045	(26414122)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2321284
40	16.2	3.6	5.2	chr20	38564829	38564940	(25879227)	+	(TCT)n	Simple_repeat	1	116	(0)	2322396
37	2.8	0.0	0.0	chr20	38564945	38564980	(25879187)	+	(CT)n	Simple_repeat	1	36	(0)	2322397
17	4.0	0.0	0.0	chr20	38564981	38565004	(25879163)	+	(CCTG)n	Simple_repeat	3	26	(0)	2322398
201	23.4	3.8	6.1	chr20	38961850	38961931	(25482236)	C	MIR	SINE/MIR	(87)	175	96	2323234
498	30.0	2.1	8.5	chr20	40498336	40498641	(23945526)	C	L2b	LINE/L2	(0)	3375	3090	2325899
519	15.6	0.0	0.0	chr20	41044696	41044772	(23399395)	+	MER3	DNA/hAT-Charlie	9	85	(124)	2326950
15	9.8	0.0	0.0	chr20	41044773	41044794	(23399373)	+	(TG)n	Simple_repeat	1	22	(0)	2326951
1903	13.9	1.1	0.4	chr20	41044808	41045087	(23399080)	C	AluSz6	SINE/Alu	(30)	282	1	2326952
19	8.3	0.0	0.0	chr20	41262539	41262564	(23181603)	+	(CT)n	Simple_repeat	1	26	(0)	2327254
308	27.7	7.3	2.9	chr20	41262637	41262740	(23181427)	+	L2b	LINE/L2	3267	3375	(0)	2327253
2256	12.2	0.0	0.0	chr20	41376611	41376914	(23067253)	+	AluSz	SINE/Alu	1	304	(8)	2327459
32	24.8	5.4	0.8	chr20	41377006	41377141	(23067026)	+	GA-rich	Low_complexity	1	142	(0)	2327460
2164	14.1	10.3	3.8	chr20	41627810	41628208	(22815959)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2327817
890	28.4	6.1	6.9	chr20	41675543	41676007	(22768160)	+	L1ME3F	LINE/L1	5732	6192	(51)	2327902
39	6.7	0.0	0.0	chr20	41676010	41676056	(22768111)	+	(TC)n	Simple_repeat	1	47	(0)	2327903
18	0.0	0.0	0.0	chr20	41676059	41676078	(22768089)	+	(CA)n	Simple_repeat	1	20	(0)	2327904
1959	26.6	8.8	2.6	chr20	41676083	41676954	(22767213)	+	HAL1	LINE/L1	1287	2217	(290)	2327897
16	26.6	2.0	1.9	chr20	43458260	43458310	(20985857)	+	(GC)n	Simple_repeat	1	52	(0)	2331218
259	30.8	0.9	4.5	chr20	44234979	44235090	(20209077)	+	MIRc	SINE/MIR	2	109	(159)	2332978
38	21.6	2.2	0.0	chr20	44235098	44235189	(20208978)	+	(TCTC)n	Simple_repeat	1	94	(0)	2332979
2322	9.5	0.3	0.0	chr20	44235190	44235483	(20208684)	C	AluSq2	SINE/Alu	(18)	295	1	2332980
274	24.4	15.1	1.7	chr20	44610210	44610339	(19833828)	C	MIR3	SINE/MIR	(116)	152	6	2333903
50	3.5	3.4	0.0	chr20	44610443	44610501	(19833666)	+	(CT)n	Simple_repeat	1	61	(0)	2333904
25	0.0	0.0	0.0	chr20	44610502	44610529	(19833638)	+	(AC)n	Simple_repeat	1	28	(0)	2333905
2176	13.6	5.2	0.8	chr20	44743297	44743660	(19700507)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2334241
556	31.6	1.7	4.3	chr20	44743661	44743729	(19700438)	C	MIR	SINE/MIR	(179)	83	15	2334240
15	18.4	3.8	8.4	chr20	45254072	45254151	(19190016)	+	(AGAAGC)n	Simple_repeat	1	83	(0)	2335234
43	0.0	0.0	0.0	chr20	45254199	45254235	(19189932)	+	(GA)n	Simple_repeat	1	37	(0)	2335235
30	3.1	0.0	0.0	chr20	46111445	46111477	(18332690)	+	(TCCACT)n	Simple_repeat	1	33	(0)	2336950
428	20.4	1.8	8.4	chr20	46111482	46111607	(18332560)	C	MLT1F1	LTR/ERVL-MaLR	(265)	304	181	2336949
176	8.9	8.5	0.0	chr20	46111613	46111941	(18332226)	+	GA-rich	Low_complexity	1	357	(0)	2336951
18	29.9	1.4	0.0	chr20	46308362	46308426	(18135741)	+	G-rich	Low_complexity	1	66	(0)	2337418
36	6.7	0.0	0.0	chr20	46308427	46308473	(18135694)	+	(GAGCGAGA)n	Simple_repeat	1	47	(0)	2337419
1843	14.5	0.0	0.0	chr20	46648636	46648904	(17795263)	+	AluJb	SINE/Alu	14	282	(30)	2338122
56	2.0	0.0	0.0	chr20	46648916	46648967	(17795200)	+	(CA)n	Simple_repeat	1	52	(0)	2338123
702	21.6	3.7	5.2	chr20	46648988	46649178	(17794989)	+	MIRb	SINE/MIR	65	252	(16)	2338124
449	29.5	4.7	5.9	chr20	46688329	46688566	(17755601)	+	MIRb	SINE/MIR	2	236	(32)	2338226
831	23.6	6.1	4.0	chr20	46688524	46688748	(17755419)	C	MIR	SINE/MIR	(0)	262	33	2338227
2331	10.4	0.0	1.9	chr20	47199725	47199925	(17244242)	C	AluSx1	SINE/Alu	(0)	312	112	2339468
4383	5.2	0.9	1.2	chr20	47199926	47200485	(17243682)	+	LTR6B	LTR/ERV1	1	558	(0)	2339469
1601	11.2	0.0	1.8	chr20	47312584	47312807	(17131360)	+	AluSx	SINE/Alu	81	300	(12)	2339720
261	28.6	10.6	4.2	chr20	47312916	47313083	(17131084)	+	L1MC	LINE/L1	5605	5784	(2098)	2339721
2410	9.5	0.0	0.0	chr20	47316051	47316346	(17127821)	+	AluSg	SINE/Alu	1	296	(14)	2339733
2200	13.7	0.0	0.0	chr20	47372285	47372583	(17071584)	+	AluSx1	SINE/Alu	2	300	(12)	2339851
53	2.0	0.0	0.0	chr20	47372668	47372717	(17071450)	+	(TC)n	Simple_repeat	1	50	(0)	2339852
1668	12.4	1.5	5.1	chr20	47391611	47391883	(17052284)	C	AluJo	SINE/Alu	(10)	302	40	2339913
983	25.9	8.1	2.9	chr20	47391926	47392274	(17051893)	C	MLT1J	LTR/ERVL-MaLR	(63)	449	81	2339914
1182	23.9	15.3	9.9	chr20	47453421	47453749	(16990418)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	179	2340124
2195	12.3	0.7	0.0	chr20	47453750	47454050	(16990117)	+	AluSz	SINE/Alu	1	303	(9)	2340125
4551	11.9	0.6	0.3	chr20	48139141	48139772	(16304395)	C	MER41B	LTR/ERV1	(0)	634	1	2341528
224	38.8	8.8	3.9	chr20	48139773	48139983	(16304184)	C	L2c	LINE/L2	(146)	3241	3020	2341527
32	2.7	0.0	0.0	chr20	48903009	48903046	(15541121)	+	(GA)n	Simple_repeat	1	38	(0)	2343162
43	0.0	0.0	0.0	chr20	48903047	48903083	(15541084)	+	(GT)n	Simple_repeat	1	37	(0)	2343163
2312	9.9	1.0	0.0	chr20	49289747	49290040	(15154127)	C	AluY	SINE/Alu	(14)	297	1	2344014
3202	20.9	9.4	7.2	chr20	49551848	49552497	(14891670)	+	MER4-int	LTR/ERV1	602	1823	(4775)	2344724
36	10.1	0.0	0.0	chr20	49552498	49552550	(14891617)	+	(TC)n	Simple_repeat	1	53	(0)	2344728
4295	16.2	6.9	5.5	chr20	49552551	49554354	(14889813)	+	MER4-int	LTR/ERV1	1407	3715	(2883)	2344724
20	0.0	0.0	0.0	chr20	49776081	49776102	(14668065)	+	(GA)n	Simple_repeat	1	22	(0)	2345295
393	30.1	10.5	4.0	chr20	49776164	49776385	(14667782)	C	L2c	LINE/L2	(232)	3155	2918	2345296
2272	10.7	1.0	0.7	chr20	49776637	49776945	(14667222)	C	AluSg	SINE/Alu	(0)	310	1	2345297
17	4.5	0.0	0.0	chr20	49831382	49831402	(14612765)	+	(AC)n	Simple_repeat	1	21	(0)	2345450
47	2.3	0.0	0.0	chr20	49831403	49831447	(14612720)	+	(CT)n	Simple_repeat	1	45	(0)	2345451
292	30.5	5.9	0.8	chr20	50195576	50195704	(14248463)	C	MIRc	SINE/MIR	(70)	198	63	2346332
1897	13.5	3.0	2.0	chr20	50195761	50196057	(14248110)	+	AluSz6	SINE/Alu	1	300	(12)	2346333
655	28.0	2.7	9.6	chr20	50384709	50384857	(14059310)	C	MLT1H	LTR/ERVL-MaLR	(342)	207	66	2346780
404	36.2	10.1	2.4	chr20	50384865	50385275	(14058892)	+	L2a	LINE/L2	2120	2565	(854)	2346784
66	32.0	2.7	1.6	chr20	50415876	50416170	(14027997)	+	GA-rich	Low_complexity	1	303	(0)	2346861
488	28.2	1.9	3.1	chr20	50425260	50425420	(14018747)	+	MLT1L	LTR/ERVL-MaLR	121	279	(331)	2346891
312	29.8	9.9	5.0	chr20	50454756	50455013	(13989154)	C	L1ME4b	LINE/L1	(31)	861	590	2346980
2228	13.8	0.0	0.0	chr20	50455094	50455398	(13988769)	C	AluSq2	SINE/Alu	(8)	305	1	2346981
56	0.0	0.0	0.0	chr20	50461567	50461614	(13982553)	+	(TG)n	Simple_repeat	1	48	(0)	2346999
1470	16.7	10.6	0.0	chr20	50461635	50461886	(13982281)	C	AluJb	SINE/Alu	(30)	282	1	2347000
12	14.4	6.2	0.0	chr20	50496699	50496730	(13947437)	+	(TTCC)n	Simple_repeat	1	34	(0)	2347103
21	8.8	5.6	0.0	chr20	50496861	50496896	(13947271)	+	(CT)n	Simple_repeat	1	38	(0)	2347104
354	27.3	0.0	2.2	chr20	50496998	50497087	(13947080)	C	L2b	LINE/L2	(0)	3375	3288	2347105
1383	18.5	5.8	2.3	chr20	50554113	50554377	(13889790)	+	AluJr	SINE/Alu	1	275	(37)	2347204
33	0.0	0.0	0.0	chr20	50554381	50554408	(13889759)	+	(TC)n	Simple_repeat	1	28	(0)	2347205
1573	21.0	12.5	1.4	chr20	50554417	50555351	(13888816)	+	L1MEc	LINE/L1	1699	2468	(3932)	2347203
471	26.9	5.5	0.6	chr20	50642124	50642301	(13801866)	C	L1ME3Cz	LINE/L1	(824)	173	6	2347353
39	2.7	0.0	0.0	chr20	50642341	50642378	(13801789)	+	(TG)n	Simple_repeat	1	38	(0)	2347354
16	13.2	0.0	0.0	chr20	50642379	50642403	(13801764)	+	(AG)n	Simple_repeat	1	25	(0)	2347355
547	19.0	9.6	9.1	chr20	50724377	50724511	(13719656)	+	MER102b	DNA/hAT-Charlie	140	281	(60)	2347578
276	25.3	4.2	2.1	chr20	50724536	50724628	(13719539)	+	L2a	LINE/L2	3331	3425	(1)	2347575
38	0.0	0.0	0.0	chr20	50767319	50767351	(13676816)	+	(TC)n	Simple_repeat	1	33	(0)	2347669
30	3.4	0.0	0.0	chr20	50767384	50767413	(13676754)	+	(CA)n	Simple_repeat	1	30	(0)	2347670
487	26.5	5.7	0.7	chr20	50767451	50767628	(13676539)	+	L1ME3Cz	LINE/L1	6	173	(824)	2347671
2507	15.7	2.1	0.5	chr20	51195457	51195867	(13248300)	C	MSTB	LTR/ERVL-MaLR	(7)	419	2	2348631
1011	24.9	12.8	5.1	chr20	51221269	51222061	(13222106)	C	L2a	LINE/L2	(2)	3424	2567	2348686
2560	9.5	1.4	2.7	chr20	51263825	51264193	(13179974)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2348770
61	0.0	0.0	0.0	chr20	51264199	51264250	(13179917)	+	(TG)n	Simple_repeat	1	52	(0)	2348771
22	15.1	0.0	0.0	chr20	51264251	51264287	(13179880)	+	GA-rich	Low_complexity	1	37	(0)	2348772
4331	10.9	0.6	6.2	chr20	51338509	51339180	(13104987)	C	MER41B	LTR/ERV1	(0)	634	1	2348941
646	26.2	15.5	0.0	chr20	51339197	51339398	(13104769)	C	MIR	SINE/MIR	(11)	251	13	2348942
1816	13.4	9.2	0.0	chr20	51830433	51830707	(12613460)	+	AluSz	SINE/Alu	2	304	(8)	2350016
55	14.4	0.0	1.1	chr20	51830708	51830791	(12613376)	+	GA-rich	Low_complexity	10	93	(0)	2350017
1890	13.5	0.4	0.0	chr20	51830882	51831140	(12613027)	C	AluSx	SINE/Alu	(51)	261	2	2350018
1483	25.5	12.9	0.9	chr20	53637971	53638212	(10805955)	C	L2a	LINE/L2	(286)	3140	2850	2353924
55	0.0	0.0	0.0	chr20	53638213	53638259	(10805908)	+	(GT)n	Simple_repeat	1	47	(0)	2353934
1819	17.6	0.0	0.0	chr20	53638267	53638544	(10805623)	C	AluJr	SINE/Alu	(30)	282	5	2353935
445	31.1	0.5	1.6	chr20	53728338	53728487	(10715680)	C	MIRb	SINE/MIR	(47)	183	33	2354194
32	3.2	0.0	0.0	chr20	53728522	53728553	(10715614)	+	(GT)n	Simple_repeat	1	32	(0)	2354195
24	14.1	0.0	0.0	chr20	53728555	53728593	(10715574)	+	(AG)n	Simple_repeat	1	39	(0)	2354196
36	7.2	0.0	0.0	chr20	53735956	53735999	(10708168)	+	(TC)n	Simple_repeat	1	44	(0)	2354219
38	27.0	1.1	0.0	chr20	53915271	53915364	(10528803)	+	GA-rich	Low_complexity	1	95	(0)	2354661
828	31.3	8.8	2.8	chr20	53953928	53954294	(10489873)	+	MLT1K	LTR/ERVL-MaLR	32	423	(172)	2354755
48	0.0	0.0	0.0	chr20	53954295	53954335	(10489832)	+	(GA)n	Simple_repeat	1	41	(0)	2354756
828	31.3	8.8	2.8	chr20	53954336	53954391	(10489776)	+	MLT1K	LTR/ERVL-MaLR	424	483	(112)	2354755
2523	14.8	14.2	3.8	chr20	55094383	55094930	(9349237)	+	LTR18B	LTR/ERVL	1	614	(0)	2356831
2169	11.3	0.0	0.0	chr20	56515291	56515572	(7928595)	+	AluSz	SINE/Alu	2	283	(29)	2359170
24	6.4	0.0	0.0	chr20	56515573	56515599	(7928568)	+	(GA)n	Simple_repeat	1	27	(0)	2359171
50	0.0	0.0	0.0	chr20	56515600	56515642	(7928525)	+	(AC)n	Simple_repeat	1	43	(0)	2359172
33	0.0	0.0	0.0	chr20	56515666	56515693	(7928474)	+	(AC)n	Simple_repeat	1	28	(0)	2359172
23	9.8	4.3	2.0	chr20	56691656	56691702	(7752465)	+	GA-rich	Low_complexity	1	49	(0)	2359619
421	25.2	3.4	4.7	chr20	56691705	56691739	(7752428)	C	MER104	DNA/TcMar-Tc2	(29)	152	120	2359620
2289	17.4	10.9	0.0	chr20	56691740	56692198	(7751969)	+	MLT2B2	LTR/ERVL	1	515	(0)	2359621
2167	10.4	6.6	1.4	chr20	56899413	56899773	(7544394)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2360126
315	28.5	12.7	6.5	chr20	57022613	57022841	(7421326)	C	LTR85a	LTR/Gypsy?	(247)	455	211	2360391
173	28.0	1.9	1.1	chr20	58375007	58375530	(6068637)	+	(CT)n	Simple_repeat	1	534	(0)	2362822
807	34.9	3.2	2.7	chr20	58976478	58976741	(5467426)	C	L2	LINE/L2	(629)	2790	2520	2363747
48	18.1	2.7	1.8	chr20	58976749	58976858	(5467309)	+	(CT)n	Simple_repeat	1	113	(0)	2363749
2374	10.1	0.3	0.0	chr20	62204023	62204328	(2239839)	C	AluSx	SINE/Alu	(5)	307	1	2368279
65	0.0	0.0	0.0	chr20	62204338	62204392	(2239775)	+	(GT)n	Simple_repeat	1	55	(0)	2368280
30	0.0	0.0	0.0	chr20	62204393	62204425	(2239742)	+	(AG)n	Simple_repeat	1	33	(0)	2368281
797	9.7	0.0	0.0	chr20	62204426	62204528	(2239639)	C	AluSx3	SINE/Alu	(30)	281	179	2368282
49	0.0	0.0	0.0	chr20	62550723	62550764	(1893403)	+	(TC)n	Simple_repeat	1	42	(0)	2368689
81	21.6	1.4	3.2	chr20	63653429	63653646	(790521)	+	G-rich	Low_complexity	1	221	(0)	2369848
295	34.8	2.5	4.8	chr20	63654054	63654219	(789948)	+	MIRb	SINE/MIR	2	163	(105)	2369849
27	7.9	2.5	0.0	chr21	5242038	5242077	(41467906)	+	(CT)n	Simple_repeat	1	41	(0)	2370978
43	0.0	0.0	0.0	chr21	5242078	5242114	(41467869)	+	(TG)n	Simple_repeat	1	37	(0)	2370979
7678	6.0	1.5	0.1	chr21	6508385	6509377	(40200606)	C	LTR13	LTR/ERVK	(0)	1007	1	2371940
797	22.4	0.5	0.1	chr21	8228115	8229742	(38480241)	+	(TCTC)n	Simple_repeat	1	1633	(0)	2373325
255	24.7	1.7	0.4	chr21	8229744	8229975	(38480008)	C	HERVIP10FH-int	LTR/ERV1	(4089)	1013	779	2373326
797	22.4	0.5	0.1	chr21	8229975	8230765	(38479218)	+	(TCTC)n	Simple_repeat	2	795	(0)	2373327
446	20.9	0.1	6.5	chr21	8230776	8230919	(38479064)	+	MER39B	LTR/ERV1	298	454	(253)	2373328
305	35.1	14.0	4.0	chr21	8994800	8995099	(37714884)	+	L1M5	LINE/L1	4807	5141	(1005)	2374115
47	0.0	0.0	0.0	chr21	10118947	10118986	(36590997)	+	(GA)n	Simple_repeat	1	40	(0)	2375296
27	29.2	1.3	0.0	chr21	10119010	10119086	(36590897)	+	(CA)n	Simple_repeat	1	78	(0)	2375297
8109	7.3	0.2	2.1	chr21	10119088	10120345	(36589638)	C	SST1	Satellite/centr	(0)	1232	1	2375298
1191	27.4	7.3	6.0	chr21	14632597	14633093	(32076890)	C	MLT1F2	LTR/ERVL-MaLR	(19)	541	38	2378083
568	7.5	0.0	4.8	chr21	14633095	14633178	(32076805)	+	MLT2D	LTR/ERVL	1	80	(334)	2378084
16	0.0	0.0	0.0	chr21	14633179	14633196	(32076787)	+	(CT)n	Simple_repeat	1	18	(0)	2378085
23	7.0	0.0	0.0	chr21	14633197	14633226	(32076757)	+	(AC)n	Simple_repeat	1	30	(0)	2378086
330	8.9	0.0	0.0	chr21	14633231	14633275	(32076708)	+	MLT2D	LTR/ERVL	516	560	(0)	2378084
344	31.8	11.4	0.6	chr21	14633395	14633555	(32076428)	C	MIR3	SINE/MIR	(18)	190	16	2378087
2239	9.6	0.7	0.0	chr21	14744131	14744412	(31965571)	+	AluSc8	SINE/Alu	1	284	(27)	2378254
36	0.0	0.0	0.0	chr21	14744413	14744446	(31965537)	+	(AAAAC)n	Simple_repeat	1	34	(0)	2378255
1635	15.0	15.2	2.6	chr21	14744451	14744793	(31965190)	C	MSTA	LTR/ERVL-MaLR	(34)	394	1	2378256
637	33.6	4.5	2.1	chr21	14753143	14753541	(31956442)	+	L1M3c	LINE/L1	539	863	(5800)	2378266
328	35.1	8.8	7.3	chr21	14753561	14753996	(31955987)	+	L1MB1	LINE/L1	1809	2251	(5235)	2378267
34	5.6	0.0	0.0	chr21	15220733	15220770	(31489213)	+	(TG)n	Simple_repeat	1	38	(0)	2378834
18	4.7	0.0	0.0	chr21	15220771	15220792	(31489191)	+	(AG)n	Simple_repeat	1	22	(0)	2378835
38	0.0	0.0	0.0	chr21	15399504	15399536	(31310447)	+	(TC)n	Simple_repeat	1	33	(0)	2379073
18	4.8	0.0	0.0	chr21	15399537	15399558	(31310425)	+	(GT)n	Simple_repeat	1	22	(0)	2379074
61	19.1	0.0	0.0	chr21	15399576	15399689	(31310294)	+	GA-rich	Low_complexity	1	114	(0)	2379075
1970	18.4	0.2	3.1	chr21	15399690	15400094	(31309889)	C	MLT2D	LTR/ERVL	(20)	534	3	2379076
29	3.0	0.0	0.0	chr21	19232571	19232604	(27477379)	+	(TC)n	Simple_repeat	1	34	(0)	2384063
39	2.7	0.0	0.0	chr21	19232605	19232642	(27477341)	+	(TG)n	Simple_repeat	1	38	(0)	2384064
6009	20.4	6.4	3.7	chr21	19232651	19233750	(27476233)	C	L1MC3	LINE/L1	(931)	7272	6096	2384065
34	2.8	2.7	0.0	chr21	19461588	19461624	(27248359)	+	(CA)n	Simple_repeat	1	38	(0)	2384361
19	4.3	0.0	0.0	chr21	19461625	19461648	(27248335)	+	(GA)n	Simple_repeat	1	24	(0)	2384362
1697	17.7	5.5	1.4	chr21	19461733	19462081	(27247902)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2384363
19	4.3	0.0	0.0	chr21	21161562	21161585	(25548398)	+	(TG)n	Simple_repeat	1	24	(0)	2386653
19	0.0	0.0	0.0	chr21	21161585	21161605	(25548378)	+	(GA)n	Simple_repeat	1	21	(0)	2386654
17	30.4	1.9	5.5	chr21	21161615	21161683	(25548300)	+	(ATATAT)n	Simple_repeat	1	110	(0)	2386655
18	18.5	0.0	2.6	chr21	21161684	21161722	(25548261)	+	(AT)n	Simple_repeat	1	39	(0)	2386656
2294	20.8	4.0	5.9	chr21	22282289	22282462	(24427521)	+	MER34	LTR/ERV1	11	179	(363)	2388109
30	0.0	0.0	0.0	chr21	22282463	22282488	(24427495)	+	(TC)n	Simple_repeat	1	26	(0)	2388110
2294	20.8	4.0	5.9	chr21	22282489	22282854	(24427129)	+	MER34	LTR/ERV1	180	540	(2)	2388109
16	19.8	2.1	2.0	chr21	29196151	29196198	(17513785)	+	(TTCTCTC)n	Simple_repeat	1	49	(0)	2397930
2019	13.2	6.3	1.9	chr21	29229967	29230330	(17479653)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2397978
20	7.8	0.0	0.0	chr21	29793445	29793471	(16916512)	+	(CT)n	Simple_repeat	1	27	(0)	2398865
14	38.9	1.2	1.2	chr21	29793467	29793549	(16916434)	+	(CTCCCC)n	Simple_repeat	1	84	(0)	2398866
510	26.9	4.1	6.6	chr21	29827730	29827975	(16882008)	C	MLT1H2	LTR/ERVL-MaLR	(4)	545	302	2398913
38	2.8	0.0	0.0	chr21	29827976	29828012	(16881971)	+	(TC)n	Simple_repeat	1	37	(0)	2398914
503	28.8	6.2	9.6	chr21	29828013	29828298	(16881685)	C	MLT1H2	LTR/ERVL-MaLR	(236)	313	1	2398913
30	6.0	0.0	0.0	chr21	30089449	30089483	(16620500)	+	(CT)n	Simple_repeat	1	35	(0)	2399308
17	0.0	0.0	0.0	chr21	30089484	30089502	(16620481)	+	(AC)n	Simple_repeat	1	19	(0)	2399309
961	25.7	11.6	9.6	chr21	30089542	30090031	(16619952)	+	MLT1F	LTR/ERVL-MaLR	23	523	(25)	2399310
16	14.0	4.8	2.3	chr21	31086435	31086476	(15623507)	+	GA-rich	Low_complexity	1	44	(0)	2400736
65	0.0	0.0	0.0	chr21	31086494	31086548	(15623435)	+	(AG)n	Simple_repeat	1	55	(0)	2400737
3378	19.8	0.8	0.5	chr21	31394026	31394686	(15315297)	+	L1MC1	LINE/L1	5667	6329	(4)	2401243
35	2.5	0.0	0.0	chr21	31394688	31394728	(15315255)	+	(TC)n	Simple_repeat	1	41	(0)	2401244
55	0.0	0.0	0.0	chr21	31394729	31394775	(15315208)	+	(CA)n	Simple_repeat	1	47	(0)	2401245
33	17.4	1.4	1.4	chr21	31732160	31732232	(14977751)	+	(CGCCC)n	Simple_repeat	1	74	(0)	2401953
2403	10.3	0.0	0.0	chr21	32613220	32613521	(14096462)	+	AluSx	SINE/Alu	1	302	(10)	2403513
183	29.7	2.6	9.8	chr21	32613522	32613536	(14096447)	C	L2a	LINE/L2	(134)	3253	3239	2403512
2028	16.4	9.3	0.2	chr21	32613595	32614230	(14095753)	C	SATR1	Satellite	(45)	693	1	2403514
2248	17.4	2.9	2.9	chr21	32779978	32780392	(13929591)	+	MSTB	LTR/ERVL-MaLR	1	415	(11)	2403746
16	17.2	7.4	1.7	chr21	33230305	33230358	(13479625)	+	(TCC)n	Simple_repeat	1	58	(0)	2404551
14	28.2	4.7	0.0	chr21	33230359	33230368	(13479615)	+	(TCCCTC)n	Simple_repeat	1	67	(0)	2404552
15	19.3	6.4	0.0	chr21	33588418	33588464	(13121519)	+	(GCC)n	Simple_repeat	1	50	(0)	2405243
20	26.4	2.5	2.4	chr21	33588685	33588764	(13121219)	+	(CCCCCG)n	Simple_repeat	1	82	(0)	2405244
33	22.6	1.6	6.2	chr21	33642406	33642532	(13067451)	+	G-rich	Low_complexity	1	129	(0)	2405359
13	25.8	1.9	3.6	chr21	33642732	33642785	(13067198)	+	(GGC)n	Simple_repeat	1	55	(0)	2405360
254	32.3	6.1	4.6	chr21	33754540	33754669	(12955314)	+	LFSINE_Vert	SINE/tRNA	205	336	(123)	2405575
75	8.9	3.1	1.5	chr21	33946472	33946598	(12763385)	+	(TTTC)n	Simple_repeat	1	131	(0)	2405866
2155	10.7	3.0	0.0	chr21	33946600	33946889	(12763094)	C	AluSx1	SINE/Alu	(13)	299	1	2405867
53	0.0	0.0	0.0	chr21	34202389	34202433	(12507550)	+	(GT)n	Simple_repeat	1	45	(0)	2406265
18	4.8	0.0	0.0	chr21	34202434	34202455	(12507528)	+	(AG)n	Simple_repeat	1	22	(0)	2406266
34	0.0	0.0	0.0	chr21	34716832	34716860	(11993123)	+	(TC)n	Simple_repeat	1	29	(0)	2407061
44	0.0	0.0	0.0	chr21	34716863	34716900	(11993083)	+	(CA)n	Simple_repeat	1	38	(0)	2407062
17	11.8	2.4	4.8	chr21	34724288	34724328	(11985655)	+	GA-rich	Low_complexity	1	42	(0)	2407072
17	11.3	0.0	0.0	chr21	34724839	34724867	(11985116)	+	(TTG)n	Simple_repeat	1	29	(0)	2407073
19	7.5	0.0	3.3	chr21	34795331	34795384	(11914599)	+	(TC)n	Simple_repeat	1	52	(0)	2407199
438	22.8	0.0	2.1	chr21	34930526	34930619	(11779364)	C	MER3	DNA/hAT-Charlie	(110)	99	8	2407365
15	0.0	0.0	0.0	chr21	34930704	34930719	(11779264)	+	(CT)n	Simple_repeat	1	16	(0)	2407366
29	0.0	0.0	0.0	chr21	34930720	34930744	(11779239)	+	(CA)n	Simple_repeat	1	25	(0)	2407367
682	28.0	5.3	3.3	chr21	35015686	35015925	(11694058)	C	MIRb	SINE/MIR	(14)	254	10	2407482
49	0.0	0.0	0.0	chr21	35038573	35038614	(11671369)	+	(CT)n	Simple_repeat	1	42	(0)	2407516
30	0.0	0.0	0.0	chr21	35038615	35038647	(11671336)	+	(GT)n	Simple_repeat	1	33	(0)	2407517
21	4.0	0.0	0.0	chr21	35038647	35038672	(11671311)	+	(GA)n	Simple_repeat	1	26	(0)	2407518
39	13.3	4.0	0.0	chr21	35047477	35047514	(11662469)	+	(TC)n	Simple_repeat	1	41	(0)	2407529
56	0.0	0.0	0.0	chr21	35047515	35047562	(11662421)	+	(AC)n	Simple_repeat	1	48	(0)	2407530
39	13.3	4.0	0.0	chr21	35047563	35047598	(11662385)	+	(TC)n	Simple_repeat	2	37	(0)	2407531
2085	13.0	5.0	8.1	chr21	35193899	35194292	(11515691)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2407750
70	2.9	1.4	0.0	chr21	35360149	35360220	(11349763)	+	(TC)n	Simple_repeat	1	73	(0)	2408000
22	13.8	0.0	0.0	chr21	35406711	35406750	(11303233)	+	(CTCT)n	Simple_repeat	1	40	(0)	2408072
30	17.8	3.0	1.4	chr21	35500867	35500933	(11209050)	+	(CT)n	Simple_repeat	1	69	(0)	2408202
16	0.0	0.0	0.0	chr21	35512066	35512082	(11197901)	+	(A)n	Simple_repeat	1	17	(0)	2408215
2127	19.7	1.0	5.4	chr21	35518966	35519352	(11190631)	+	MLT2D	LTR/ERVL	5	372	(42)	2408223
40	0.0	0.0	0.0	chr21	35519353	35519386	(11190597)	+	(CA)n	Simple_repeat	1	34	(0)	2408224
2127	19.7	1.0	5.4	chr21	35519387	35519427	(11190556)	+	MLT2D	LTR/ERVL	373	413	(1)	2408223
1152	27.7	6.1	6.5	chr21	35550767	35551307	(11158676)	+	Charlie11	DNA/hAT-Charlie	262	800	(1396)	2408280
32	14.8	0.0	0.0	chr21	35551357	35551409	(11158574)	+	(TC)n	Simple_repeat	1	53	(0)	2408281
33	3.1	0.0	0.0	chr21	35968833	35968865	(10741118)	+	(GA)n	Simple_repeat	1	33	(0)	2408920
2032	18.0	1.7	7.7	chr21	36062836	36063279	(10646704)	+	LTR19A	LTR/ERV1	74	486	(0)	2409071
1068	10.7	0.0	0.0	chr21	36063280	36063428	(10646555)	+	HERVFH19-int	LTR/ERV1	1	149	(5437)	2409071
2885	7.2	2.0	1.5	chr21	36063425	36063822	(10646161)	+	HERVFH19-int	LTR/ERV1	277	676	(7043)	2409071
332	33.2	5.1	6.2	chr21	36548843	36549099	(10160884)	+	L2c	LINE/L2	3128	3381	(6)	2410086
19	0.0	4.2	0.0	chr21	36549277	36549300	(10160683)	+	(CT)n	Simple_repeat	1	25	(0)	2410087
274	29.0	12.8	5.3	chr21	36664083	36664442	(10045541)	C	L2b	LINE/L2	(50)	3325	2935	2410289
50	0.0	0.0	0.0	chr21	36664510	36664552	(10045431)	+	(AC)n	Simple_repeat	1	43	(0)	2410290
15	9.7	0.0	0.0	chr21	36664553	36664574	(10045409)	+	(GA)n	Simple_repeat	1	22	(0)	2410291
14	4.5	0.0	4.0	chr21	36966420	36966444	(9743539)	+	(CGCC)n	Simple_repeat	1	25	(0)	2410749
24	28.1	1.1	3.2	chr21	37073267	37073358	(9636625)	+	(CGG)n	Simple_repeat	1	93	(0)	2410977
16	11.7	3.6	0.0	chr21	37073463	37073490	(9636493)	+	(GT)n	Simple_repeat	1	29	(0)	2410978
382	23.7	2.1	0.0	chr21	37266558	37266650	(9443333)	C	MIR3	SINE/MIR	(56)	152	58	2411266
235	9.3	3.9	15.7	chr21	38075777	38075826	(8634157)	+	L1MB4	LINE/L1	6135	6182	(1)	2412546
198	23.9	5.6	1.5	chr21	38075834	38075901	(8634082)	C	L2	LINE/L2	(1637)	1782	1712	2412537
104	18.7	5.5	0.4	chr21	38075902	38076158	(8633825)	+	GA-rich	Low_complexity	1	271	(0)	2412548
934	29.4	7.2	4.7	chr21	38181411	38182475	(8527508)	+	L1MEb	LINE/L1	72	1000	(5136)	2412709
286	15.4	0.0	1.8	chr21	38182479	38182544	(8527439)	C	MLT2D	LTR/ERVL	(4)	556	494	2412710
2045	19.0	1.6	2.6	chr21	38182562	38182950	(8527033)	C	MLT2D	LTR/ERVL	(20)	394	10	2412710
1367	22.6	5.6	4.8	chr21	38424025	38424187	(8285796)	+	MLT1A	LTR/ERVL-MaLR	18	189	(185)	2413001
44	0.0	0.0	0.0	chr21	38424188	38424225	(8285758)	+	(CT)n	Simple_repeat	1	38	(0)	2413002
1367	22.6	5.6	4.8	chr21	38424226	38424415	(8285568)	+	MLT1A	LTR/ERVL-MaLR	190	374	(0)	2413001
260	11.8	1.9	3.2	chr21	38743173	38743330	(7966653)	C	HERV17-int	LTR/ERV1	(7767)	859	704	2413425
2290	7.9	1.0	0.0	chr21	38751184	38751473	(7958510)	+	AluSc5	SINE/Alu	1	293	(16)	2413446
1552	15.1	15.4	6.7	chr21	38751474	38751691	(7958292)	+	MSTA	LTR/ERVL-MaLR	205	422	(6)	2413445
60	22.7	2.3	5.4	chr21	38805637	38805854	(7904129)	+	(CCCCT)n	Simple_repeat	1	223	(0)	2413543
28	3.3	0.0	0.0	chr21	38805860	38805890	(7904093)	+	(TCCCTCC)n	Simple_repeat	1	31	(0)	2413544
52	29.2	3.3	0.0	chr21	38938233	38938414	(7771569)	+	(TC)n	Simple_repeat	1	188	(0)	2413737
18	9.7	3.0	0.0	chr21	39183299	39183331	(7526652)	+	(CCT)n	Simple_repeat	1	34	(0)	2414124
15	23.2	4.8	1.5	chr21	39183481	39183542	(7526441)	+	(CCCACCG)n	Simple_repeat	1	65	(0)	2414125
2264	10.0	0.3	0.0	chr21	39370111	39370400	(7339583)	+	AluSx	SINE/Alu	1	291	(21)	2414463
41	0.0	0.0	0.0	chr21	39370422	39370456	(7339527)	+	(AC)n	Simple_repeat	1	35	(0)	2414464
29	18.1	1.8	0.0	chr21	39370457	39370513	(7339470)	+	GA-rich	Low_complexity	1	58	(0)	2414465
1539	21.8	8.6	3.7	chr21	39370519	39370928	(7339055)	+	MER70B	LTR/ERVL	4	435	(143)	2414466
632	24.9	8.4	0.3	chr21	39414504	39414727	(7295256)	+	MLT1G1	LTR/ERVL-MaLR	1	234	(345)	2414555
44	2.4	0.0	0.0	chr21	39414743	39414784	(7295199)	+	(TG)n	Simple_repeat	1	42	(0)	2414556
415	24.5	5.4	2.5	chr21	39414845	39414913	(7295070)	C	HAL1ME	LINE/L1	(2287)	178	105	2414557
16	0.0	0.0	0.0	chr21	41561616	41561633	(5148350)	+	(CT)n	Simple_repeat	1	18	(0)	2417644
59	1.8	0.0	0.0	chr21	41561634	41561688	(5148295)	+	(CA)n	Simple_repeat	1	55	(0)	2417645
13	16.0	2.7	2.6	chr21	41561755	41561791	(5148192)	+	(GAACCAT)n	Simple_repeat	1	38	(0)	2417646
2110	13.4	4.2	4.0	chr21	42227661	42228040	(4481943)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2418622
13	0.0	0.0	4.8	chr21	43659537	43659557	(3050426)	+	(CCG)n	Simple_repeat	1	21	(0)	2420580
17	16.4	0.0	4.4	chr21	43659831	43659875	(3050108)	+	G-rich	Low_complexity	1	45	(0)	2420581
31	0.0	0.0	0.0	chr21	43726013	43726039	(2983944)	+	(TC)n	Simple_repeat	1	27	(0)	2420704
1944	18.6	7.8	2.6	chr21	43778812	43779275	(2930708)	C	LTR26C	LTR/ERV1	(0)	539	50	2420785
24	14.7	2.1	0.0	chr21	43779276	43779329	(2930654)	+	(CCCT)n	Simple_repeat	1	55	(0)	2420786
2114	11.0	3.5	2.3	chr21	43779330	43779637	(2930346)	C	AluSx	SINE/Alu	(0)	312	1	2420787
2189	11.0	0.3	1.3	chr21	43861061	43861368	(2848615)	+	AluSx1	SINE/Alu	1	305	(7)	2420941
24	12.7	2.3	0.0	chr21	43938067	43938104	(2771879)	+	(TC)n	Simple_repeat	1	39	(0)	2421065
40	4.8	0.0	0.0	chr21	43938105	43938147	(2771836)	+	(CA)n	Simple_repeat	1	43	(0)	2421066
280	20.9	1.5	0.0	chr21	44299424	44299490	(2410493)	C	L1ME3A	LINE/L1	(29)	6144	6077	2421589
18	13.6	4.9	0.0	chr21	44299576	44299616	(2410367)	+	G-rich	Low_complexity	1	43	(0)	2421590
25	9.6	2.1	2.1	chr21	44714350	44714396	(1995587)	+	(GGGAG)n	Simple_repeat	1	48	(0)	2422059
1859	17.5	8.2	1.3	chr21	44714398	44714774	(1995209)	+	MSTA	LTR/ERVL-MaLR	20	424	(4)	2422060
19	11.1	0.0	0.0	chr21	44843579	44843607	(1866376)	+	(TC)n	Simple_repeat	1	29	(0)	2422235
16	20.6	0.0	0.0	chr21	44843608	44843616	(1866367)	+	(GTCTCT)n	Simple_repeat	2	39	(0)	2422236
20	14.9	2.7	0.0	chr21	44843680	44843716	(1866267)	+	(TC)n	Simple_repeat	1	38	(0)	2422237
18	17.1	0.0	0.0	chr21	44843740	44843772	(1866211)	+	(CT)n	Simple_repeat	1	33	(0)	2422238
355	23.5	15.0	0.0	chr21	44843799	44843951	(1866032)	+	MLT1A	LTR/ERVL-MaLR	195	374	(0)	2422234
382	18.2	20.5	0.0	chr21	45074081	45074258	(1635725)	+	FRAM	SINE/Alu	15	287	(15)	2422493
3106	16.8	16.3	1.3	chr21	45150605	45151275	(1558708)	C	MER54B	LTR/ERVL	(0)	793	3	2422590
59	1.9	0.0	0.0	chr21	45646054	45646108	(1063875)	+	(TC)n	Simple_repeat	1	55	(0)	2423036
35	0.0	0.0	0.0	chr21	45646109	45646146	(1063837)	+	(GT)n	Simple_repeat	1	38	(0)	2423037
6541	12.7	4.3	1.3	chr21	46143385	46144361	(565622)	+	LTR13	LTR/ERVK	1	1007	(0)	2423545
197	18.1	2.7	4.3	chr21	46144362	46144774	(565209)	+	(CTCC)n	Simple_repeat	4	412	(0)	2423546
288	15.4	13.0	2.6	chr21	46253743	46253819	(456164)	+	MSTA	LTR/ERVL-MaLR	114	215	(213)	2423675
281	16.3	7.1	0.9	chr21	46253862	46253939	(456044)	+	THE1D	LTR/ERVL-MaLR	114	192	(183)	2423676
1367	11.4	15.4	0.8	chr21	46253918	46254182	(455801)	+	MSTA	LTR/ERVL-MaLR	118	428	(0)	2423677
15	20.4	0.0	2.4	chr22	16601640	16601680	(34216788)	+	(GAGC)n	Simple_repeat	1	41	(0)	2427583
16	24.2	0.0	0.0	chr22	16601729	16601772	(34216696)	+	(CCGCGCC)n	Simple_repeat	1	44	(0)	2427584
641	8.0	0.0	0.0	chr22	16632891	16632965	(34185503)	C	AluYb8	SINE/Alu	(241)	77	3	2427625
93	11.3	1.4	0.0	chr22	16791688	16791834	(34026634)	+	(AGAG)n	Simple_repeat	1	149	(0)	2427827
47	0.0	0.0	0.0	chr22	17066900	17066939	(33751529)	+	(AG)n	Simple_repeat	1	40	(0)	2428156
65	12.7	4.3	2.1	chr22	17066940	17067074	(33751394)	+	GA-rich	Low_complexity	4	141	(0)	2428157
240	29.0	7.0	3.6	chr22	17067082	17067192	(33751276)	+	MER91C	DNA/hAT-Tip100	1	115	(25)	2428158
33	0.0	0.0	0.0	chr22	19062780	19062807	(31755661)	+	(CT)n	Simple_repeat	1	28	(0)	2431369
700	26.2	14.8	8.1	chr22	19072078	19072591	(31745877)	+	HAL1	LINE/L1	419	1024	(1483)	2431382
2283	9.7	0.0	0.7	chr22	19072592	19072890	(31745578)	+	AluSc	SINE/Alu	1	297	(12)	2431383
3580	17.7	4.3	3.2	chr22	19109050	19109781	(31708687)	+	L1MB2	LINE/L1	5402	6145	(26)	2431458
181	15.6	3.0	0.0	chr22	19117449	19117480	(31700988)	+	L2b	LINE/L2	3322	3354	(21)	2431472
335	24.6	7.7	0.6	chr22	19140847	19140963	(31677505)	+	MIR	SINE/MIR	73	195	(35)	2431494
1930	17.7	0.0	0.3	chr22	19146590	19146894	(31671574)	+	AluJr4	SINE/Alu	1	304	(8)	2431506
404	32.1	16.8	1.1	chr22	19146898	19147423	(31671045)	C	L2b	LINE/L2	(656)	2763	2139	2431505
2014	10.0	8.2	0.4	chr22	19214677	19214956	(31603512)	C	AluSx1	SINE/Alu	(8)	304	1	2431619
383	26.7	17.1	4.8	chr22	19244837	19245147	(31573321)	C	L2c	LINE/L2	(4)	3383	3027	2431653
2135	13.5	0.0	0.7	chr22	19245187	19245490	(31572978)	C	AluSg	SINE/Alu	(7)	303	2	2431654
2306	9.2	0.3	0.3	chr22	19248015	19248309	(31570159)	+	AluSp	SINE/Alu	1	295	(18)	2431662
1143	11.8	11.7	3.8	chr22	19248310	19248432	(31570036)	+	MER30	DNA/hAT-Charlie	105	229	(1)	2431661
1603	17.0	2.4	6.1	chr22	19248433	19248719	(31569749)	C	L1MB8	LINE/L1	(51)	6127	5846	2431660
1954	24.0	7.8	7.8	chr22	19295712	19296356	(31522112)	+	L1MEg	LINE/L1	809	1501	(4724)	2431751
5250	11.8	4.4	2.3	chr22	19296357	19297175	(31521293)	C	LTR1A2	LTR/ERV1	(0)	837	1	2431753
1921	15.6	0.3	4.9	chr22	19416313	19416638	(31401830)	C	AluJb	SINE/Alu	(1)	311	1	2431961
4938	18.3	5.3	5.6	chr22	19416639	19416922	(31401546)	+	L1MB2	LINE/L1	5073	5364	(776)	2431959
2104	12.2	0.0	0.0	chr22	19416923	19417201	(31401267)	+	AluSx1	SINE/Alu	6	284	(28)	2431962
1917	12.6	1.3	3.0	chr22	19420180	19420481	(31397987)	+	AluJb	SINE/Alu	5	301	(11)	2431971
21	12.5	4.5	0.0	chr22	19420490	19420533	(31397935)	+	A-rich	Low_complexity	1	46	(0)	2431972
768	12.2	1.7	0.0	chr22	19420737	19420851	(31397617)	+	L1PB4	LINE/L1	6038	6154	(2)	2431974
2435	8.3	0.0	0.3	chr22	19421016	19421316	(31397152)	+	AluSq2	SINE/Alu	1	300	(13)	2431975
211	30.3	6.2	0.0	chr22	19464834	19464909	(31353559)	+	L2b	LINE/L2	3272	3352	(23)	2432049
624	22.1	16.6	7.8	chr22	19465399	19465731	(31352737)	+	L1ME2	LINE/L1	5786	6153	(11)	2432050
2052	11.8	3.7	0.3	chr22	19576302	19576590	(31241878)	+	AluSz	SINE/Alu	1	299	(13)	2432249
1197	17.3	2.1	10.7	chr22	19577338	19577654	(31240814)	C	L1MB7	LINE/L1	(10)	6174	5886	2432250
2489	7.0	0.0	0.7	chr22	19596348	19596648	(31221820)	C	AluYm1	SINE/Alu	(12)	299	1	2432287
278	26.8	0.0	0.0	chr22	19596650	19596705	(31221763)	C	MIRb	SINE/MIR	(90)	178	123	2432288
8325	17.0	5.5	5.3	chr22	19681384	19682759	(31135709)	+	L1MDa	LINE/L1	1012	2390	(4243)	2432423
188	35.3	0.0	4.5	chr22	19757429	19757517	(31060951)	C	L3	LINE/CR1	(2533)	1566	1482	2432507
7558	8.4	2.6	0.5	chr22	19947258	19948243	(30870225)	C	LTR13	LTR/ERVK	(0)	1007	1	2432723
1838	13.7	0.0	1.1	chr22	20044264	20044526	(30773942)	+	AluJb	SINE/Alu	24	283	(29)	2432830
2634	14.1	4.5	3.8	chr22	20071474	20071953	(30746515)	C	MER31A	LTR/ERV1	(0)	485	2	2432876
1703	17.1	9.1	2.6	chr22	20071955	20072318	(30746150)	C	MER31-int	LTR/ERV1	(20)	4916	4525	2432876
229	35.5	3.6	2.7	chr22	20311980	20312089	(30506379)	C	L2	LINE/L2	(1059)	2360	2250	2433100
1109	23.4	12.0	0.5	chr22	20317875	20318265	(30500203)	+	L1M5	LINE/L1	3548	3989	(2157)	2433104
453	30.3	10.8	4.0	chr22	20474692	20474886	(30343582)	C	L1ME4b	LINE/L1	(356)	536	323	2433372
264	22.6	7.7	0.0	chr22	20475006	20475089	(30343379)	C	L1ME4b	LINE/L1	(749)	143	53	2433372
232	17.4	0.0	8.0	chr22	20546084	20546133	(30272335)	C	L1MC5a	LINE/L1	(345)	2432	2387	2433532
2507	6.1	0.3	0.0	chr22	20557825	20558121	(30260347)	+	AluY	SINE/Alu	1	298	(13)	2433545
94	18.3	1.5	1.5	chr22	20564452	20564654	(30253814)	+	(CAG)n	Simple_repeat	1	206	(0)	2433561
232	30.7	1.3	0.0	chr22	20644490	20644564	(30173904)	+	L3	LINE/CR1	3916	3991	(108)	2433681
1462	9.8	0.0	0.0	chr22	20644607	20644790	(30173678)	C	AluSp	SINE/Alu	(0)	313	130	2433682
311	26.4	10.4	5.5	chr22	20644802	20644965	(30173503)	+	MER5A	DNA/hAT-Charlie	1	173	(16)	2433683
653	15.5	2.0	0.0	chr22	20648576	20648672	(30169796)	+	AluJr	SINE/Alu	38	136	(176)	2433694
36	2.9	0.0	0.0	chr22	20648693	20648727	(30169741)	+	(GA)n	Simple_repeat	1	35	(0)	2433695
1494	13.1	0.0	0.5	chr22	20648731	20648936	(30169532)	+	AluJb	SINE/Alu	82	286	(26)	2433696
4081	18.4	3.8	12.4	chr22	20656630	20658936	(30159532)	C	REP522	Satellite/telo	(147)	2107	1	2433709
8605	20.1	4.4	4.1	chr22	20658937	20661924	(30156544)	C	L1M1	LINE/L1	(814)	6748	3216	2433710
335	23.4	9.6	7.2	chr22	20701662	20701813	(30116655)	C	L1ME4c	LINE/L1	(333)	497	342	2433780
13	4.1	0.0	9.7	chr22	20703220	20703250	(30115218)	+	(GGCGG)n	Simple_repeat	1	31	(0)	2433783
19378	12.9	2.7	2.0	chr22	20828853	20830758	(29987710)	C	L1PA15	LINE/L1	(2182)	4584	2664	2434005
2169	14.3	0.0	0.3	chr22	20830759	20831072	(29987396)	C	AluSq	SINE/Alu	(0)	313	1	2434009
2545	7.8	0.3	0.0	chr22	20833649	20833957	(29984511)	C	AluSx4	SINE/Alu	(0)	310	1	2434014
519	20.5	0.2	0.1	chr22	20833960	20834057	(29984411)	C	FLAM_C	SINE/Alu	(39)	94	6	2434015
520	20.6	14.5	0.7	chr22	20844710	20844846	(29973622)	C	MIR	SINE/MIR	(0)	262	104	2434042
1925	19.3	10.5	3.2	chr22	20881799	20882263	(29936205)	+	MLT1D	LTR/ERVL-MaLR	3	505	(0)	2434128
1739	15.0	5.1	0.7	chr22	20891687	20891966	(29926502)	+	AluJr	SINE/Alu	5	297	(15)	2434143
1599	13.0	0.0	0.0	chr22	20891977	20892191	(29926277)	+	AluSx	SINE/Alu	76	290	(22)	2434144
2535	7.8	0.7	0.0	chr22	20892224	20892532	(29925936)	+	AluY	SINE/Alu	1	311	(0)	2434145
1515	25.7	9.5	4.1	chr22	20906219	20906826	(29911642)	+	L1ME4b	LINE/L1	234	877	(15)	2434188
1913	8.1	0.0	0.0	chr22	20941589	20941824	(29876644)	C	AluSg7	SINE/Alu	(6)	303	68	2434284
775	18.1	2.0	0.0	chr22	20942114	20942262	(29876206)	C	L1MB4	LINE/L1	(213)	5967	5816	2434285
1540	17.9	4.3	1.8	chr22	20954446	20954719	(29863749)	+	AluSg	SINE/Alu	1	281	(29)	2434310
2053	10.9	0.7	1.4	chr22	20954745	20955028	(29863440)	C	AluSx	SINE/Alu	(29)	283	2	2434311
1673	13.7	6.6	0.4	chr22	20956614	20956884	(29861584)	+	AluJb	SINE/Alu	1	289	(23)	2434317
2507	5.0	0.0	1.0	chr22	21037078	21037376	(29781092)	C	AluY	SINE/Alu	(15)	296	1	2434433
516	26.2	5.9	6.8	chr22	21037377	21037512	(29780956)	+	MER34B-int	LTR/ERV1	136	267	(5089)	2434431
1958	18.2	6.8	1.8	chr22	21037514	21037548	(29780920)	C	LTR24	LTR/ERV1	(0)	467	435	2434434
913	21.6	2.4	0.0	chr22	21037549	21037710	(29780758)	+	FRAM	SINE/Alu	1	166	(10)	2434435
2357	10.4	0.0	0.0	chr22	21555650	21555948	(29262520)	+	AluSz	SINE/Alu	1	299	(13)	2435409
1604	20.7	1.4	0.0	chr22	21555963	21556247	(29262221)	+	AluJb	SINE/Alu	11	299	(13)	2435410
2453	5.2	0.7	2.0	chr22	21679806	21680111	(29138357)	+	AluY	SINE/Alu	1	302	(9)	2435682
2040	13.9	0.0	1.3	chr22	21680245	21680547	(29137921)	+	AluSz	SINE/Alu	1	299	(13)	2435683
2201	10.9	0.0	3.5	chr22	21720029	21720198	(29098270)	+	AluSz	SINE/Alu	144	303	(9)	2435747
1844	16.1	1.4	0.7	chr22	21720209	21720499	(29097969)	C	AluJb	SINE/Alu	(18)	294	2	2435749
2034	10.6	1.0	5.6	chr22	21720505	21720806	(29097662)	C	AluSx	SINE/Alu	(24)	288	1	2435750
2306	9.4	0.7	0.0	chr22	21787708	21788004	(29030464)	+	AluSx4	SINE/Alu	1	299	(11)	2435891
1423	17.1	10.5	0.7	chr22	21792138	21792438	(29026030)	+	Charlie1a	DNA/hAT-Charlie	749	1082	(373)	2435905
668	4.9	1.2	0.0	chr22	21792440	21792521	(29025947)	+	5S	rRNA	7	89	(32)	2435906
2193	10.9	0.3	0.3	chr22	21814551	21814843	(29003625)	+	AluSg	SINE/Alu	1	293	(17)	2435952
72	1.5	0.0	0.0	chr22	21814846	21814911	(29003557)	+	(GA)n	Simple_repeat	1	66	(0)	2435953
317	26.5	4.0	6.4	chr22	21814913	21815028	(29003440)	C	FLAM_C	SINE/Alu	(112)	189	2	2435954
2121	16.9	10.3	8.4	chr22	21839725	21840121	(28978347)	+	L1MB7	LINE/L1	5591	6029	(155)	2436015
1709	20.2	1.0	0.0	chr22	21840122	21840418	(28978050)	C	AluJb	SINE/Alu	(12)	300	1	2436018
2121	16.9	10.3	8.4	chr22	21840419	21840504	(28977964)	+	L1MB7	LINE/L1	6030	6111	(73)	2436015
2292	11.3	0.0	0.0	chr22	21850085	21850384	(28968084)	C	AluSz6	SINE/Alu	(12)	300	1	2436043
797	25.8	13.7	8.0	chr22	21850478	21851029	(28967439)	+	L1ME3D	LINE/L1	4465	5083	(2154)	2436038
2302	8.4	0.0	0.3	chr22	21881292	21881577	(28936891)	+	AluY	SINE/Alu	1	285	(26)	2436127
43	15.6	6.5	1.8	chr22	21881578	21881628	(28936840)	+	GA-rich	Low_complexity	61	112	(0)	2436128
226	15.7	7.9	10.3	chr22	21882268	21882345	(28936123)	C	MLT1L	LTR/ERVL-MaLR	(349)	261	186	2436130
2349	10.9	0.3	0.0	chr22	21882372	21882682	(28935786)	C	AluSx1	SINE/Alu	(0)	312	1	2436131
3569	23.6	9.6	4.9	chr22	21889347	21889906	(28928562)	+	L1MB4	LINE/L1	442	1070	(5576)	2436143
1839	13.7	8.2	0.0	chr22	21894000	21894277	(28924191)	+	AluSc	SINE/Alu	1	303	(6)	2436161
2501	18.4	6.1	0.6	chr22	21894278	21894823	(28923645)	+	L1MB4	LINE/L1	5237	5814	(830)	2436143
1241	15.2	0.0	1.1	chr22	21894824	21895014	(28923454)	+	AluSx3	SINE/Alu	118	306	(5)	2436162
2261	10.2	0.3	0.7	chr22	21899462	21899764	(28918704)	C	AluSp	SINE/Alu	(11)	302	1	2436175
3066	24.1	4.7	5.7	chr22	21899768	21900078	(28918390)	C	L1MD2	LINE/L1	(4696)	1944	1619	2436165
344	32.8	14.7	1.6	chr22	22010126	22010432	(28808036)	+	L1MEh	LINE/L1	278	631	(1604)	2436369
230	31.3	7.8	0.6	chr22	22010531	22010697	(28807771)	+	L1MEh	LINE/L1	775	954	(1281)	2436369
2801	16.0	6.0	5.3	chr22	22023353	22023901	(28794567)	C	MER41A	LTR/ERV1	(0)	554	2	2436393
13	13.2	0.0	0.0	chr22	22031009	22031033	(28787435)	+	(CTC)n	Simple_repeat	1	25	(0)	2436406
1744	11.9	17.5	4.6	chr22	22039347	22039716	(28778752)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2436410
13	21.6	6.2	0.0	chr22	22046379	22046426	(28772042)	+	(TCTCATG)n	Simple_repeat	1	51	(0)	2436416
976	26.6	12.8	5.8	chr22	22062336	22063164	(28755304)	+	L1M4	LINE/L1	799	1694	(5823)	2436429
2070	14.4	1.3	0.3	chr22	22063438	22063742	(28754726)	C	AluSx3	SINE/Alu	(3)	308	1	2436430
950	26.4	3.1	1.9	chr22	22080528	22080848	(28737620)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	66	2436448
2251	9.8	0.7	0.3	chr22	22080880	22081174	(28737294)	+	AluSc8	SINE/Alu	1	296	(15)	2436449
2979	16.6	4.7	0.9	chr22	22082045	22083045	(28735423)	+	L1PA17	LINE/L1	4835	5863	(303)	2436452
218	24.7	0.9	0.0	chr22	22084233	22084292	(28734176)	+	L2c	LINE/L2	3337	3419	(7)	2436455
925	7.9	0.0	0.0	chr22	22133875	22133988	(28684480)	+	AluSq2	SINE/Alu	181	294	(19)	2436519
550	26.3	3.4	2.0	chr22	22133990	22134860	(28683608)	+	ALR/Alpha	Satellite/centr	1	882	(0)	2436520
533	26.9	19.2	6.6	chr22	22199376	22199796	(28618672)	C	LTR16B1	LTR/ERVL	(4)	476	2	2436579
16	14.2	0.0	0.0	chr22	22205172	22205202	(28613266)	+	(TTGTTT)n	Simple_repeat	1	31	(0)	2436588
193	25.4	1.8	9.8	chr22	22205259	22205319	(28613149)	C	MER5B	DNA/hAT-Charlie	(21)	157	102	2436589
25	5.7	2.6	2.5	chr22	22206163	22206185	(28612283)	+	(TC)n	Simple_repeat	1	23	(0)	2436590
50	2.2	0.0	0.0	chr22	22206186	22206232	(28612236)	+	(CA)n	Simple_repeat	1	47	(0)	2436591
25	5.7	2.6	2.5	chr22	22206233	22206247	(28612221)	+	(TC)n	Simple_repeat	2	17	(0)	2436592
243	24.1	2.4	0.0	chr22	22478219	22478301	(28340167)	+	L1ME4b	LINE/L1	612	696	(196)	2436902
1646	21.5	15.0	2.1	chr22	22478537	22479012	(28339456)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	2436903
2492	18.8	9.2	3.0	chr22	22479013	22479548	(28338920)	+	MLT1F-int	LTR/ERVL-MaLR	1	574	(915)	2436903
2281	8.4	3.0	0.0	chr22	22494740	22495025	(28323443)	C	AluSg	SINE/Alu	(15)	295	1	2436934
461	18.8	13.3	9.3	chr22	22531099	22531178	(28287290)	C	MER2B	DNA/TcMar-Tigger	(1)	335	244	2437018
2350	9.4	0.0	0.3	chr22	22531179	22531485	(28286983)	+	AluY	SINE/Alu	1	306	(5)	2437019
461	18.8	13.3	9.3	chr22	22531486	22531533	(28286935)	C	MER2	DNA/TcMar-Tigger	(93)	252	210	2437018
989	17.4	0.0	0.0	chr22	22531536	22531727	(28286741)	C	AluSx3	SINE/Alu	(0)	311	136	2437020
970	16.4	0.0	0.2	chr22	22534998	22535176	(28283292)	C	L1PA16	LINE/L1	(329)	5975	5799	2437029
2001	13.0	0.3	1.4	chr22	22536249	22536540	(28281928)	C	AluSz	SINE/Alu	(23)	289	1	2437036
1622	18.0	6.4	1.0	chr22	22571633	22571926	(28246542)	+	AluJr	SINE/Alu	1	311	(1)	2437098
56	20.8	1.1	6.6	chr22	22571927	22572105	(28246363)	+	A-rich	Low_complexity	1	181	(0)	2437099
264	18.0	6.2	6.2	chr22	22572221	22572285	(28246183)	+	HERV16-int	LTR/ERVL	1282	1346	(4321)	2437097
6768	11.6	0.6	1.0	chr22	22649348	22650319	(28168149)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2437224
191	33.6	9.8	8.3	chr22	23634111	23634143	(27184325)	C	L2	LINE/L2	(665)	2754	2715	2438638
1936	11.9	0.0	0.0	chr22	23634144	23634396	(27184072)	+	AluSx1	SINE/Alu	39	291	(21)	2438639
191	33.6	9.8	8.3	chr22	23634397	23634656	(27183812)	C	L2	LINE/L2	(705)	2714	2462	2438638
57	3.6	0.0	0.0	chr22	24011077	24011134	(26807334)	+	(AC)n	Simple_repeat	1	58	(0)	2439358
26	18.8	2.0	0.0	chr22	24011135	24011185	(26807283)	+	(GC)n	Simple_repeat	1	52	(0)	2439359
2587	5.9	0.0	0.0	chr22	24985332	24985638	(25832830)	C	AluY	SINE/Alu	(4)	307	1	2441167
39	21.8	1.1	0.0	chr22	24985686	24985727	(25832741)	+	GA-rich	Low_complexity	1	42	(0)	2441168
38	4.9	0.0	0.0	chr22	24985728	24985769	(25832699)	+	(GT)n	Simple_repeat	1	42	(0)	2441169
39	21.8	1.1	0.0	chr22	24985770	24985814	(25832654)	+	GA-rich	Low_complexity	43	88	(0)	2441170
20	20.2	0.0	2.3	chr22	25111218	25111260	(25707208)	+	(AC)n	Simple_repeat	1	43	(0)	2441503
1648	15.9	5.5	3.2	chr22	25543584	25543866	(25274602)	C	AluJb	SINE/Alu	(22)	290	1	2442452
31	0.0	0.0	0.0	chr22	25543894	25543920	(25274548)	+	(GT)n	Simple_repeat	1	27	(0)	2442453
21	0.0	0.0	0.0	chr22	25543921	25543943	(25274525)	+	(AG)n	Simple_repeat	1	23	(0)	2442454
53	0.0	0.0	0.0	chr22	25726913	25726957	(25091511)	+	(GT)n	Simple_repeat	1	45	(0)	2442721
355	7.1	0.0	0.0	chr22	25727121	25727162	(25091306)	+	AluJo	SINE/Alu	84	125	(187)	2442722
622	27.6	4.2	1.1	chr22	26295062	26295248	(24523220)	+	MIRb	SINE/MIR	45	237	(31)	2443998
82	30.7	3.3	1.6	chr22	26617569	26617931	(24200537)	+	(TCTC)n	Simple_repeat	1	375	(0)	2444766
140	23.1	5.2	0.2	chr22	26642409	26642814	(24175654)	+	GA-rich	Low_complexity	1	427	(0)	2444837
54	8.6	0.0	0.0	chr22	26648881	26648954	(24169514)	+	(GA)n	Simple_repeat	1	74	(0)	2444851
777	28.8	7.1	0.4	chr22	26649089	26649325	(24169143)	C	MIRb	SINE/MIR	(6)	262	9	2444852
2330	9.7	0.3	0.6	chr22	26652345	26652655	(24165813)	C	AluSg	SINE/Alu	(0)	310	1	2444861
19	4.1	0.0	0.0	chr22	26652656	26652665	(24165803)	+	(CT)n	Simple_repeat	2	11	(0)	2444862
184	31.9	5.5	2.8	chr22	26811124	26811194	(24007274)	+	MIR1_Amn	SINE/MIR	39	111	(119)	2445225
46	0.0	2.1	2.1	chr22	26811242	26811288	(24007180)	+	(CT)n	Simple_repeat	1	48	(0)	2445226
50	0.0	0.0	0.0	chr22	26811290	26811332	(24007136)	+	(GT)n	Simple_repeat	1	43	(0)	2445227
397	30.9	0.8	0.0	chr22	27760959	27761084	(23057384)	C	MIRb	SINE/MIR	(117)	151	25	2447459
68	29.2	2.6	0.4	chr22	27761182	27761414	(23057054)	+	(TCTC)n	Simple_repeat	1	239	(0)	2447460
327	33.0	0.0	2.5	chr22	27831865	27831985	(22986483)	+	L1ME4c	LINE/L1	387	504	(326)	2447614
22	3.9	0.0	0.0	chr22	27831998	27832024	(22986444)	+	(TC)n	Simple_repeat	1	27	(0)	2447615
25	0.0	0.0	0.0	chr22	27832024	27832051	(22986417)	+	(TG)n	Simple_repeat	1	28	(0)	2447616
36	8.7	0.0	0.0	chr22	27832051	27832099	(22986369)	+	(GA)n	Simple_repeat	1	49	(0)	2447617
2375	8.5	0.0	0.0	chr22	28817845	28818139	(22000329)	C	AluSx1	SINE/Alu	(17)	295	1	2449278
24	3.6	0.0	0.0	chr22	28818176	28818204	(22000264)	+	(TG)n	Simple_repeat	1	29	(0)	2449279
32	3.2	0.0	0.0	chr22	28818205	28818236	(22000232)	+	(GA)n	Simple_repeat	1	32	(0)	2449280
42	0.0	0.0	0.0	chr22	28887236	28887271	(21931197)	+	(GT)n	Simple_repeat	1	36	(0)	2449496
18	17.7	0.0	0.0	chr22	28887409	28887440	(21931028)	+	GA-rich	Low_complexity	1	32	(0)	2449497
14	30.8	0.0	0.0	chr22	29268282	29268333	(21550135)	+	G-rich	Low_complexity	1	52	(0)	2450246
1239	24.0	12.2	1.7	chr22	29382404	29382964	(21435504)	C	L2a	LINE/L2	(14)	3412	2783	2450435
220	26.6	10.1	9.5	chr22	29383003	29383160	(21435308)	+	L2b	LINE/L2	3264	3422	(4)	2450432
153	16.0	3.8	1.7	chr22	30219685	30220009	(20598459)	+	(CTTT)n	Simple_repeat	1	331	(0)	2452169
34	7.2	0.0	0.0	chr22	30220010	30220054	(20598414)	+	(TCCT)n	Simple_repeat	1	45	(0)	2452170
34	9.1	0.0	0.0	chr22	30220055	30220101	(20598367)	+	(TC)n	Simple_repeat	1	47	(0)	2452171
153	16.0	3.8	1.7	chr22	30220102	30220114	(20598354)	+	(CTTT)n	Simple_repeat	4	17	(0)	2452172
1592	15.6	0.8	3.0	chr22	30220116	30220385	(20598083)	C	AluJo	SINE/Alu	(34)	278	15	2452173
2345	12.8	3.7	1.6	chr22	30785643	30786015	(20032453)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2453401
29	0.0	0.0	0.0	chr22	30786019	30786043	(20032425)	+	(TG)n	Simple_repeat	1	25	(0)	2453402
34	14.5	6.4	1.2	chr22	31063316	31063393	(19755075)	+	(CT)n	Simple_repeat	1	83	(0)	2453926
860	12.8	0.0	0.0	chr22	31063461	31063577	(19754891)	+	FLAM_A	SINE/Alu	2	118	(24)	2453927
1556	19.0	2.1	7.8	chr22	31063598	31064008	(19754460)	C	MER57B2	LTR/ERV1	(13)	390	4	2453928
549	18.0	16.9	0.0	chr22	31365325	31365452	(19453016)	+	AluJr	SINE/Alu	156	309	(3)	2454606
51	19.4	1.2	6.8	chr22	31365453	31365612	(19452856)	+	GA-rich	Low_complexity	1	162	(0)	2454607
307	31.7	7.6	9.8	chr22	31365624	31365649	(19452819)	+	L1ME4a	LINE/L1	5873	5898	(226)	2454608
2171	11.0	0.0	0.3	chr22	31365650	31365957	(19452511)	+	AluSp	SINE/Alu	1	307	(6)	2454609
2404	8.3	0.0	0.7	chr22	32586943	32587243	(18231225)	+	AluSc	SINE/Alu	2	300	(9)	2457283
17	20.0	2.5	8.4	chr22	32587287	32587367	(18231101)	+	G-rich	Low_complexity	1	83	(0)	2457284
51	0.0	0.0	0.0	chr22	35156292	35156335	(15662133)	+	(AC)n	Simple_repeat	1	44	(0)	2462384
56	0.0	0.0	0.0	chr22	35156397	35156444	(15662024)	+	(AC)n	Simple_repeat	1	48	(0)	2462384
16	0.0	0.0	0.0	chr22	35156445	35156461	(15662007)	+	(CT)n	Simple_repeat	1	17	(0)	2462385
1277	28.3	3.8	3.4	chr22	35156468	35156909	(15661559)	+	MLT1K	LTR/ERVL-MaLR	144	587	(8)	2462386
2218	10.7	3.9	6.6	chr22	35209184	35209532	(15608936)	C	THE1D	LTR/ERVL-MaLR	(27)	354	1	2462482
567	27.6	11.6	4.5	chr22	35218949	35219356	(15599112)	+	MLT1L	LTR/ERVL-MaLR	121	497	(15)	2462504
3774	20.5	8.1	6.3	chr22	35241956	35242530	(15575938)	C	L1MDa	LINE/L1	(2392)	4145	3612	2462545
33	0.0	0.0	0.0	chr22	35242531	35242558	(15575910)	+	(CT)n	Simple_repeat	1	28	(0)	2462546
3774	14.7	9.5	0.8	chr22	35242559	35243086	(15575382)	C	L1MDa	LINE/L1	(2926)	3611	3073	2462545
842	24.8	2.7	0.9	chr22	35443884	35444099	(15374369)	+	MIR	SINE/MIR	35	254	(8)	2463007
18	25.3	2.9	2.9	chr22	35444170	35444237	(15374231)	+	A-rich	Low_complexity	1	70	(0)	2463008
789	23.6	1.2	0.0	chr22	35505493	35505657	(15312811)	C	L1ME1	LINE/L1	(0)	6179	6013	2463162
389	30.1	6.4	3.3	chr22	35513139	35513289	(15305179)	C	L2b	LINE/L2	(0)	3375	3220	2463182
808	20.1	4.1	0.0	chr22	35513313	35513451	(15305017)	+	AluJr4	SINE/Alu	164	308	(4)	2463183
44	0.0	0.0	0.0	chr22	35513454	35513491	(15304977)	+	(GT)n	Simple_repeat	1	38	(0)	2463184
973	26.8	15.7	0.4	chr22	35513494	35514097	(15304371)	C	L2a	LINE/L2	(164)	3262	2540	2463185
42	18.5	4.0	1.0	chr22	35521984	35522083	(15296385)	+	(TC)n	Simple_repeat	1	104	(0)	2463208
159	33.8	2.0	2.3	chr22	35593151	35593840	(15224628)	+	A-rich	Low_complexity	1	704	(0)	2463384
15	5.6	0.0	0.0	chr22	35894979	35894997	(14923471)	+	(A)n	Simple_repeat	1	19	(0)	2463926
17	12.8	0.0	2.8	chr22	35895042	35895077	(14923391)	+	(TCCC)n	Simple_repeat	1	36	(0)	2463927
32	3.2	0.0	0.0	chr22	35895078	35895109	(14923359)	+	(CT)n	Simple_repeat	1	32	(0)	2463928
1817	14.4	14.0	1.9	chr22	35995469	35995843	(14822625)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2464117
658	20.6	7.5	1.8	chr22	36145731	36145893	(14672575)	+	MLT1B	LTR/ERVL-MaLR	1	173	(217)	2464470
37	26.2	1.0	0.0	chr22	36145906	36146001	(14672467)	+	(TC)n	Simple_repeat	1	97	(0)	2464471
33	5.6	0.0	0.0	chr22	36146002	36146038	(14672430)	+	(CA)n	Simple_repeat	1	37	(0)	2464472
710	24.1	2.0	0.5	chr22	36146043	36146238	(14672230)	+	MLT1B	LTR/ERVL-MaLR	192	390	(0)	2464470
217	32.6	3.2	2.1	chr22	36632338	36632431	(14186037)	+	MIRc	SINE/MIR	131	225	(43)	2465517
38	0.0	5.0	0.0	chr22	36632457	36632496	(14185972)	+	(TC)n	Simple_repeat	1	42	(0)	2465518
324	30.6	4.9	3.8	chr22	36632579	36632843	(14185625)	+	L2a	LINE/L2	803	1070	(1026)	2465519
73	1.5	0.0	0.0	chr22	36703761	36703827	(14114641)	+	(CT)n	Simple_repeat	1	67	(0)	2465663
14	11.8	4.9	4.7	chr22	36914179	36914219	(13904249)	+	(TGTGCA)n	Simple_repeat	1	43	(0)	2466116
35	5.3	0.0	0.0	chr22	36914390	36914428	(13904040)	+	(TC)n	Simple_repeat	1	39	(0)	2466117
75	0.0	1.5	0.0	chr22	37125517	37125583	(13692885)	+	(GA)n	Simple_repeat	1	68	(0)	2466567
425	25.4	8.2	2.9	chr22	37125638	37125811	(13692657)	+	MER113	DNA/hAT-Charlie	55	238	(283)	2466568
65	24.6	3.5	2.9	chr22	37212205	37212435	(13606033)	+	GA-rich	Low_complexity	1	239	(0)	2466724
435	31.4	11.6	2.5	chr22	37255519	37255760	(13562708)	+	L1MC4	LINE/L1	963	1229	(4986)	2466824
85	22.5	3.3	0.5	chr22	37255765	37255978	(13562490)	+	GA-rich	Low_complexity	1	221	(0)	2466825
2481	6.7	0.0	0.0	chr22	39021107	39021405	(11797063)	C	AluSg	SINE/Alu	(11)	299	1	2470728
288	30.0	13.0	0.7	chr22	39240646	39240786	(11577682)	C	L2a	LINE/L2	(5)	3421	3261	2471182
23	25.6	0.0	3.1	chr22	39240895	39240959	(11577509)	+	(TC)n	Simple_repeat	1	65	(0)	2471183
61	5.1	2.3	2.3	chr22	39243211	39243296	(11575172)	+	(TC)n	Simple_repeat	1	88	(0)	2471185
2327	5.4	0.4	0.4	chr22	39311316	39311595	(11506873)	C	AluYc	SINE/Alu	(19)	280	1	2471356
21	21.3	0.0	0.0	chr22	39936657	39936712	(10881756)	+	GA-rich	Low_complexity	1	56	(0)	2472559
310	28.6	6.5	4.5	chr22	39936756	39936934	(10881534)	+	MER124	DNA?	48	230	(167)	2472560
589	28.3	27.1	3.8	chr22	39957245	39957663	(10860805)	+	L2a	LINE/L2	1329	1837	(1582)	2472592
1867	14.5	0.3	1.6	chr22	39957664	39957967	(10860501)	+	AluJr	SINE/Alu	12	311	(1)	2472593
962	16.6	1.9	0.0	chr22	39987193	39987349	(10831119)	+	AluJr	SINE/Alu	137	296	(16)	2472654
41	2.6	0.0	0.0	chr22	39987401	39987440	(10831028)	+	(CA)n	Simple_repeat	1	40	(0)	2472655
27	18.0	0.0	0.0	chr22	40177925	40177974	(10640494)	+	GA-rich	Low_complexity	1	50	(0)	2473082
36	0.0	0.0	0.0	chr22	40727443	40727473	(10090995)	+	(GA)n	Simple_repeat	1	31	(0)	2474213
2875	15.6	12.1	0.2	chr22	40814035	40814665	(10003803)	+	LTR62	LTR/ERVL	1	709	(0)	2474419
15	19.6	0.0	0.0	chr22	41091811	41091839	(9726629)	+	GA-rich	Low_complexity	1	29	(0)	2475138
1684	14.7	4.7	2.6	chr22	44122211	44122483	(6695985)	+	AluJb	SINE/Alu	2	280	(32)	2481398
117	4.2	0.0	0.0	chr22	44122489	44122610	(6695858)	+	(AG)n	Simple_repeat	1	122	(0)	2481399
1978	29.6	7.3	2.4	chr22	44122611	44122974	(6695494)	C	L1MC5a	LINE/L1	(1962)	815	428	2481397
444	28.6	12.2	6.1	chr22	45238781	45238875	(5579593)	+	MIRb	SINE/MIR	19	106	(162)	2483499
31	0.0	0.0	0.0	chr22	45238876	45238902	(5579566)	+	(CT)n	Simple_repeat	1	27	(0)	2483500
444	28.6	12.2	6.1	chr22	45238903	45239037	(5579431)	+	MIRb	SINE/MIR	107	264	(4)	2483499
1170	31.0	10.5	2.5	chr22	49281461	49282244	(1536224)	C	L2	LINE/L2	(377)	3042	2189	2489178
358	25.1	1.9	0.6	chr22	49282257	49282365	(1536103)	+	MIRc	SINE/MIR	39	156	(112)	2489179
24	20.2	7.4	2.0	chr22	50314497	50314595	(503873)	+	(AGGCAG)n	Simple_repeat	1	104	(0)	2490428
29	17.9	3.8	2.4	chr3	4493401	4493479	(193802080)	+	GA-rich	Low_complexity	1	82	(0)	2499109
30	0.0	0.0	0.0	chr3	4831107	4831132	(193464427)	+	(TC)n	Simple_repeat	1	26	(0)	2499647
21	4.0	0.0	0.0	chr3	4831133	4831158	(193464401)	+	(AC)n	Simple_repeat	1	26	(0)	2499648
16	17.1	0.0	0.0	chr3	4831159	4831186	(193464373)	+	(CTCT)n	Simple_repeat	1	54	(0)	2499649
34	3.0	0.0	0.0	chr3	4898969	4899002	(193396557)	+	(GA)n	Simple_repeat	1	34	(0)	2499756
47	0.0	0.0	0.0	chr3	4927764	4927803	(193367756)	+	(TG)n	Simple_repeat	1	40	(0)	2499799
21	10.8	0.0	0.0	chr3	4927804	4927834	(193367725)	+	(AG)n	Simple_repeat	1	31	(0)	2499800
240	25.4	1.4	0.0	chr3	4927838	4927908	(193367651)	+	MER5A1	DNA/hAT-Charlie	38	109	(57)	2499801
707	28.6	0.0	1.2	chr3	5016944	5017116	(193278443)	C	MIR	SINE/MIR	(24)	238	68	2499987
412	24.7	3.8	6.1	chr3	5553124	5553287	(192742272)	+	Charlie4z	DNA/hAT-Charlie	1	160	(7)	2500996
36	23.3	0.0	0.0	chr3	5553362	5553446	(192742113)	+	(CTCT)n	Simple_repeat	1	85	(0)	2500997
575	23.9	12.0	3.2	chr3	5754814	5755003	(192540556)	+	MER5C1	DNA/hAT-Charlie	3	211	(52)	2501276
209	36.7	2.4	0.0	chr3	9363318	9363437	(188932122)	+	MIR3	SINE/MIR	34	156	(52)	2507069
11081	11.1	5.9	6.2	chr3	9640221	9640523	(188655036)	C	HUERS-P1-int	LTR/ERV1	(4729)	1534	1223	2507633
43	0.0	0.0	0.0	chr3	9640524	9640560	(188654999)	+	(AG)n	Simple_repeat	1	37	(0)	2507651
11081	11.1	5.9	6.2	chr3	9640561	9641559	(188654000)	C	HUERS-P1-int	LTR/ERV1	(5041)	1222	175	2507633
2145	11.8	0.0	1.0	chr3	9645525	9645700	(188649859)	C	AluSx1	SINE/Alu	(3)	309	134	2507661
2416	7.5	0.0	0.0	chr3	9645701	9645992	(188649567)	C	AluSq10	SINE/Alu	(21)	292	1	2507662
2145	11.8	0.0	1.0	chr3	9645993	9646120	(188649439)	C	AluSx1	SINE/Alu	(179)	133	8	2507661
581	29.3	0.0	0.1	chr3	9792008	9792154	(188503405)	+	MIRb	SINE/MIR	11	156	(106)	2507967
472	19.4	2.0	0.0	chr3	9792184	9792281	(188503278)	+	MIR	SINE/MIR	131	230	(32)	2507967
16	4.8	0.0	4.2	chr3	10340365	10340388	(187955171)	+	(GA)n	Simple_repeat	1	24	(0)	2509211
38	0.0	0.0	0.0	chr3	10356965	10356997	(187938562)	+	(GA)n	Simple_repeat	1	33	(0)	2509244
249	27.0	1.6	1.6	chr3	10357048	10357111	(187938448)	C	L2b	LINE/L2	(0)	3375	3312	2509245
2219	10.6	0.0	0.0	chr3	11267700	11267981	(187027578)	+	AluSz	SINE/Alu	1	282	(30)	2511128
23	0.0	0.0	0.0	chr3	11267982	11268006	(187027553)	+	(CT)n	Simple_repeat	1	25	(0)	2511129
40	0.0	0.0	0.0	chr3	11268007	11268040	(187027519)	+	(CA)n	Simple_repeat	1	34	(0)	2511130
665	12.7	4.3	0.0	chr3	11268059	11268168	(187027391)	C	MER41A	LTR/ERV1	(6)	548	434	2511131
765	10.8	0.8	0.8	chr3	12263426	12263547	(186032012)	C	L1MA1	LINE/L1	(0)	6302	6181	2512961
47	0.0	0.0	0.0	chr3	12263591	12263630	(186031929)	+	(TC)n	Simple_repeat	1	40	(0)	2512962
257	21.9	1.4	2.7	chr3	12664617	12664691	(185630868)	+	L1ME3G	LINE/L1	189	262	(662)	2513760
6171	10.4	6.3	1.0	chr3	12867827	12868729	(185426830)	+	LTR13_	LTR/ERVK	1	954	(0)	2514258
308	21.9	11.0	0.9	chr3	12995200	12995305	(185300254)	+	MIR3	SINE/MIR	5	122	(86)	2514434
417	31.8	0.0	0.8	chr3	13085122	13085251	(185210308)	C	MIRb	SINE/MIR	(70)	198	70	2514615
256	31.6	12.3	4.2	chr3	13085334	13085475	(185210084)	+	L3	LINE/CR1	3935	4089	(10)	2514614
205	31.2	11.1	2.6	chr3	13485045	13485159	(184810400)	C	MIR1_Amn	SINE/MIR	(79)	151	26	2515352
232	25.9	13.6	1.8	chr3	13599901	13600010	(184695549)	C	L2a	LINE/L2	(1096)	2323	2199	2515594
59	4.9	0.0	0.0	chr3	13600018	13600081	(184695478)	+	(AG)n	Simple_repeat	1	64	(0)	2515596
20	0.0	0.0	0.0	chr3	14599664	14599685	(183695874)	+	(TC)n	Simple_repeat	1	22	(0)	2517281
47	2.3	0.0	0.0	chr3	14599686	14599730	(183695829)	+	(TG)n	Simple_repeat	1	45	(0)	2517282
669	26.0	11.4	4.6	chr3	14685035	14685418	(183610141)	+	L1ME3C	LINE/L1	5706	6118	(5)	2517448
38	4.9	0.0	0.0	chr3	14685440	14685481	(183610078)	+	(CT)n	Simple_repeat	1	42	(0)	2517450
19	11.6	0.0	0.0	chr3	14685482	14685510	(183610049)	+	(GT)n	Simple_repeat	1	29	(0)	2517451
4823	14.2	2.3	2.9	chr3	14685511	14685851	(183609708)	C	L1MA9	LINE/L1	(153)	6159	5833	2517452
34	2.6	2.4	2.3	chr3	15115089	15115130	(183180429)	+	(CT)n	Simple_repeat	1	43	(0)	2518209
173	37.6	0.0	2.3	chr3	15591846	15592544	(182703015)	+	(AT)n	Simple_repeat	1	699	(0)	2519110
2151	15.9	5.0	3.6	chr3	15692800	15693276	(182602283)	+	L1MB2	LINE/L1	5682	6165	(6)	2519269
21	0.0	0.0	0.0	chr3	15693328	15693350	(182602209)	+	(AG)n	Simple_repeat	1	23	(0)	2519270
284	16.9	8.4	1.5	chr3	15693491	15693556	(182602003)	+	MER103C	DNA/hAT-Charlie	133	203	(94)	2519271
2235	10.8	13.6	0.3	chr3	16150815	16151185	(182144374)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2520038
44	23.0	1.9	0.0	chr3	16203438	16203543	(182092016)	+	(CT)n	Simple_repeat	1	108	(0)	2520133
54	0.0	0.0	0.0	chr3	16203544	16203589	(182091970)	+	(CA)n	Simple_repeat	1	46	(0)	2520134
2216	11.5	12.4	1.6	chr3	16226343	16226723	(182068836)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2520184
31	5.8	0.0	0.0	chr3	17738367	17738402	(180557157)	+	(AC)n	Simple_repeat	1	36	(0)	2522295
368	18.9	0.1	0.0	chr3	17738418	17738493	(180557066)	C	MIR	SINE/MIR	(91)	177	94	2522296
18	6.4	2.7	5.3	chr3	17742520	17742559	(180553000)	+	(TCC)n	Simple_repeat	1	38	(0)	2522304
41	0.0	0.0	0.0	chr3	17928945	17928979	(180366580)	+	(CT)n	Simple_repeat	1	35	(0)	2522605
29	0.0	0.0	0.0	chr3	17985772	17985796	(180309763)	+	(CT)n	Simple_repeat	1	25	(0)	2522682
43	4.2	2.0	0.0	chr3	17985870	17985918	(180309641)	+	(TC)n	Simple_repeat	1	50	(0)	2522683
110	16.8	5.7	1.1	chr3	19934289	19934551	(178361008)	+	(TC)n	Simple_repeat	1	278	(0)	2525330
258	28.2	1.2	1.2	chr3	19946406	19946491	(178349068)	+	MIRb	SINE/MIR	180	265	(3)	2525350
14	16.2	0.0	0.0	chr3	19947408	19947435	(178348124)	+	(CGC)n	Simple_repeat	1	28	(0)	2525351
8165	7.0	7.6	10.7	chr3	20369520	20370984	(177924575)	C	Harlequin-int	LTR/ERV1	(5480)	1416	1	2526071
4429	18.5	3.1	0.3	chr3	21531183	21532064	(176763495)	+	L1MC1	LINE/L1	5417	6323	(10)	2527496
20	4.2	0.0	0.0	chr3	21532067	21532091	(176763468)	+	(GA)n	Simple_repeat	1	25	(0)	2527497
665	26.2	11.0	0.0	chr3	21532122	21532331	(176763228)	+	MLT1L	LTR/ERVL-MaLR	321	556	(54)	2527493
30	20.9	4.4	1.1	chr3	23805827	23805918	(174489641)	+	G-rich	Low_complexity	1	95	(0)	2530810
16	21.9	0.0	2.3	chr3	23806030	23806073	(174489486)	+	(CAG)n	Simple_repeat	1	44	(0)	2530811
21	23.0	5.9	2.2	chr3	23806111	23806195	(174489364)	+	(CCG)n	Simple_repeat	1	90	(0)	2530812
25	0.0	0.0	0.0	chr3	23845562	23845589	(174449970)	+	(TC)n	Simple_repeat	1	28	(0)	2530876
38	2.8	0.0	0.0	chr3	23845590	23845626	(174449933)	+	(TG)n	Simple_repeat	1	37	(0)	2530877
1425	23.7	1.8	5.9	chr3	23845673	23846026	(174449533)	C	MER58B	DNA/hAT-Charlie	(2)	339	1	2530878
1683	19.3	0.0	0.0	chr3	23927797	23928070	(174367489)	+	AluJb	SINE/Alu	1	274	(38)	2531023
17	0.0	4.8	0.0	chr3	23928074	23928094	(174367465)	+	(CT)n	Simple_repeat	1	22	(0)	2531024
47	2.1	2.1	0.0	chr3	23928095	23928142	(174367417)	+	(AC)n	Simple_repeat	1	49	(0)	2531025
968	13.6	6.0	0.0	chr3	23928152	23928291	(174367268)	+	AluSx3	SINE/Alu	135	283	(28)	2531026
855	28.0	6.2	3.6	chr3	23931248	23931658	(174363901)	+	L2a	LINE/L2	2930	3351	(75)	2531036
12	10.6	0.0	8.1	chr3	23931694	23931711	(174363848)	+	A-rich	Low_complexity	1	16	(0)	2531039
30	0.0	0.0	0.0	chr3	23931712	23931737	(174363822)	+	(GA)n	Simple_repeat	1	26	(0)	2531040
12	10.6	0.0	8.1	chr3	23931738	23931755	(174363804)	+	A-rich	Low_complexity	17	33	(0)	2531041
2184	22.0	3.8	13.5	chr3	24001944	24002324	(174293235)	C	MLT2B3	LTR/ERVL	(0)	554	232	2531180
31	0.0	0.0	0.0	chr3	24002325	24002351	(174293208)	+	(AC)n	Simple_repeat	1	27	(0)	2531181
2184	22.0	3.8	13.5	chr3	24002352	24002583	(174292976)	C	MLT2B3	LTR/ERVL	(323)	231	3	2531180
14	0.0	0.0	0.0	chr3	25664850	25664867	(172630692)	+	(GCC)n	Simple_repeat	1	18	(0)	2533626
41	26.1	6.0	0.6	chr3	25783483	25783650	(172511909)	+	(GGCCGG)n	Simple_repeat	1	177	(0)	2533801
328	27.1	5.4	2.8	chr3	25789564	25789707	(172505852)	C	L1ME4a	LINE/L1	(272)	5852	5705	2533812
16	19.2	7.4	0.0	chr3	25790038	25790045	(172505514)	+	(GCGCGT)n	Simple_repeat	1	57	(0)	2533813
16	19.7	0.0	4.4	chr3	25790046	25790090	(172505469)	+	(GCGT)n	Simple_repeat	1	45	(0)	2533814
390	27.6	0.9	0.0	chr3	25820589	25820693	(172474866)	C	MLT1K	LTR/ERVL-MaLR	(341)	254	149	2533879
43	2.5	0.0	0.0	chr3	25820835	25820875	(172474684)	+	(CT)n	Simple_repeat	1	41	(0)	2533880
68	0.0	0.0	0.0	chr3	31216580	31216637	(167078922)	+	(TC)n	Simple_repeat	1	58	(0)	2541719
1558	26.4	7.6	4.9	chr3	31216753	31217305	(167078254)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	2541720
4445	16.0	2.9	6.1	chr3	31433023	31433842	(166861717)	+	MER54B	LTR/ERVL	1	793	(0)	2542093
20	9.7	0.0	2.8	chr3	31532887	31532922	(166762637)	+	(CCT)n	Simple_repeat	1	36	(0)	2542253
13	25.0	2.7	5.3	chr3	33097152	33097224	(165198335)	+	(CCCGCGC)n	Simple_repeat	1	75	(0)	2545277
539	17.5	12.9	20.2	chr3	33099105	33099441	(165196118)	+	L1MC4	LINE/L1	7732	8040	(2)	2545284
379	35.7	1.5	2.5	chr3	33223390	33223590	(165071969)	C	ERVL-E-int	LTR/ERVL	(1176)	4538	4340	2545520
31	5.9	0.0	0.0	chr3	33223735	33223770	(165071789)	+	(CT)n	Simple_repeat	1	36	(0)	2545521
51	0.0	0.0	0.0	chr3	33223771	33223814	(165071745)	+	(AC)n	Simple_repeat	1	44	(0)	2545522
767	30.6	14.3	5.2	chr3	33223816	33224030	(165071529)	C	ERVL-E-int	LTR/ERVL	(1771)	3896	3629	2545520
12	19.9	0.0	0.0	chr3	33798625	33798653	(164496906)	+	(CAGC)n	Simple_repeat	1	29	(0)	2546482
35	0.0	0.0	0.0	chr3	33908627	33908656	(164386903)	+	(GT)n	Simple_repeat	1	30	(0)	2546664
46	5.4	0.0	0.0	chr3	33908657	33908714	(164386845)	+	(AG)n	Simple_repeat	1	58	(0)	2546665
1115	21.3	6.3	10.3	chr3	33938630	33939074	(164356485)	C	MSTC	LTR/ERVL-MaLR	(0)	428	3	2546713
1841	22.3	5.4	16.1	chr3	33972803	33973434	(164322125)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	2546765
543	25.7	11.1	0.4	chr3	36701550	36701830	(161593729)	+	Charlie29a	DNA/hAT-Charlie	331	645	(74)	2550263
70	3.0	0.0	0.0	chr3	36701850	36701918	(161593641)	+	(CT)n	Simple_repeat	1	69	(0)	2550264
275	21.6	9.4	7.9	chr3	36702022	36702147	(161593412)	C	MLT1I	LTR/ERVL-MaLR	(1)	410	283	2550265
2241	10.7	0.0	0.3	chr3	36923257	36923555	(161372004)	C	AluSx	SINE/Alu	(14)	298	1	2550646
2433	14.1	6.5	2.8	chr3	36923556	36923610	(161371949)	+	MER83	LTR/ERV1	396	448	(0)	2550645
17956	14.9	3.8	3.6	chr3	36923611	36925588	(161369971)	+	MER83A-int	LTR/ERV1	12	1994	(2291)	2550645
3324	10.2	4.3	0.0	chr3	36932941	36933431	(161362128)	+	LTR10D	LTR/ERV1	1	513	(0)	2550661
1625	25.3	16.2	1.4	chr3	37401380	37402077	(160893482)	+	L2	LINE/L2	1720	2540	(879)	2551510
285	27.9	7.1	8.7	chr3	37402085	37402118	(160893441)	C	L1MC4a	LINE/L1	(333)	5979	5946	2551511
41	0.0	0.0	0.0	chr3	37402119	37402153	(160893406)	+	(AC)n	Simple_repeat	1	35	(0)	2551512
1545	17.4	2.6	4.5	chr3	37402154	37402474	(160893085)	C	L1MC4a	LINE/L1	(367)	5945	5625	2551511
56	3.6	0.0	0.0	chr3	37829326	37829382	(160466177)	+	(TC)n	Simple_repeat	1	57	(0)	2552139
783	14.9	0.0	0.7	chr3	37829389	37829523	(160466036)	C	L1ME2z	LINE/L1	(10)	6434	6301	2552140
224	23.0	9.8	0.0	chr3	38453450	38453523	(159842036)	C	MIR1_Amn	SINE/MIR	(32)	198	117	2553070
2461	9.4	0.3	0.0	chr3	39012044	39012352	(159283207)	+	AluSp	SINE/Alu	1	310	(3)	2553845
44	14.3	0.0	2.4	chr3	39012392	39012474	(159283085)	+	(CTTT)n	Simple_repeat	1	83	(0)	2553846
2173	13.0	2.6	0.0	chr3	39012475	39012774	(159282785)	C	AluSz	SINE/Alu	(4)	308	1	2553847
2513	8.4	0.0	0.0	chr3	39023644	39023942	(159271617)	C	AluSx1	SINE/Alu	(13)	299	1	2553868
3494	12.3	6.1	3.4	chr3	39024033	39024443	(159271116)	C	MER39	LTR/ERV1	(0)	707	294	2553869
3964	10.5	8.0	0.2	chr3	39024444	39025045	(159270514)	+	MER39B	LTR/ERV1	1	653	(0)	2553870
14	8.4	0.0	3.7	chr3	39406156	39406182	(158889377)	+	(GATA)n	Simple_repeat	1	27	(0)	2554474
182	32.1	4.7	3.6	chr3	40107988	40108071	(158187488)	C	L2c	LINE/L2	(631)	2788	2704	2555411
46	0.0	0.0	0.0	chr3	40108175	40108213	(158187346)	+	(GA)n	Simple_repeat	1	39	(0)	2555413
722	20.0	10.1	2.3	chr3	40308962	40309135	(157986424)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2555736
251	31.5	1.1	0.0	chr3	40364386	40364477	(157931082)	C	L1MEh	LINE/L1	(760)	1475	1383	2555825
15	28.2	0.0	2.2	chr3	40364479	40364523	(157931036)	+	(TC)n	Simple_repeat	1	45	(0)	2555826
480	21.5	22.2	0.0	chr3	40364524	40364681	(157930878)	C	HAL1	LINE/L1	(1071)	1436	1234	2555821
868	23.7	7.2	0.6	chr3	40371410	40371748	(157923811)	+	L1MEi	LINE/L1	1151	1513	(699)	2555836
43	0.0	0.0	2.4	chr3	40371790	40371830	(157923729)	+	(GA)n	Simple_repeat	1	41	(0)	2555837
3947	13.5	3.3	7.2	chr3	40471197	40471320	(157824239)	C	L1MA9	LINE/L1	(256)	6056	5945	2556047
2097	10.6	0.0	1.8	chr3	40471321	40471604	(157823955)	C	AluSc	SINE/Alu	(30)	279	1	2556048
67	1.6	0.0	0.0	chr3	40614840	40614901	(157680658)	+	(GA)n	Simple_repeat	1	62	(0)	2556309
273	21.1	0.0	0.0	chr3	40615047	40615103	(157680456)	C	L1ME3	LINE/L1	(1)	6161	6105	2556310
1835	16.0	2.2	2.9	chr3	40845660	40845971	(157449588)	+	AluJr	SINE/Alu	1	310	(2)	2556669
695	26.4	16.1	5.7	chr3	40845972	40845994	(157449565)	+	MLT1H	LTR/ERVL-MaLR	314	340	(209)	2556668
33	5.2	0.0	0.0	chr3	40845995	40846034	(157449525)	+	(CACACA)n	Simple_repeat	1	40	(0)	2556670
695	26.4	16.1	5.7	chr3	40846035	40846215	(157449344)	+	MLT1H	LTR/ERVL-MaLR	341	549	(0)	2556668
2395	13.3	6.8	1.5	chr3	41118365	41118769	(157176790)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2557047
1926	27.0	26.3	10.3	chr3	41207642	41208170	(157087389)	+	L2b	LINE/L2	274	986	(2433)	2557198
551	21.0	7.4	0.0	chr3	41208171	41208308	(157087251)	C	Charlie10a	DNA/hAT-Charlie	(51)	229	81	2557199
1926	27.0	26.3	10.3	chr3	41208309	41209531	(157086028)	+	L2b	LINE/L2	987	2640	(779)	2557198
1795	11.8	5.3	1.5	chr3	42444975	42445245	(155850314)	+	AluSz6	SINE/Alu	1	282	(30)	2559121
4189	11.2	0.7	6.5	chr3	42445246	42445272	(155850287)	+	THE1D-int	LTR/ERVL-MaLR	1326	1327	(304)	2559120
46	2.3	0.0	0.0	chr3	42445273	42445316	(155850243)	+	(CA)n	Simple_repeat	1	44	(0)	2559122
4189	11.2	0.7	6.5	chr3	42445317	42445633	(155849926)	+	THE1D-int	LTR/ERVL-MaLR	1328	1631	(0)	2559120
2321	10.9	0.0	0.3	chr3	42538691	42538992	(155756567)	C	AluSx	SINE/Alu	(11)	301	1	2559271
34	3.0	0.0	0.0	chr3	42539099	42539132	(155756427)	+	(CT)n	Simple_repeat	1	34	(0)	2559272
188	35.0	4.1	1.7	chr3	42539238	42539356	(155756203)	+	MIR3	SINE/MIR	55	176	(32)	2559273
663	23.7	22.4	2.3	chr3	42601843	42602117	(155693442)	C	L2a	LINE/L2	(41)	3385	3021	2559378
1563	17.5	9.5	0.3	chr3	42602118	42602433	(155693126)	+	Tigger3a	DNA/TcMar-Tigger	1	348	(0)	2559379
4032	13.4	2.9	3.7	chr3	42718678	42719381	(155576178)	+	MER41-int	LTR/ERV1	1	609	(5337)	2559539
51	0.0	0.0	0.0	chr3	42719383	42719426	(155576133)	+	(CT)n	Simple_repeat	1	44	(0)	2559540
9002	16.8	4.8	3.2	chr3	42719437	42721839	(155573720)	+	PABL_A-int	LTR/ERV1	2565	4921	(2895)	2559541
417	28.2	11.8	5.8	chr3	42926734	42926963	(155368596)	C	L2a	LINE/L2	(166)	3260	3012	2559891
34	0.0	0.0	0.0	chr3	42926964	42926992	(155368567)	+	(AG)n	Simple_repeat	1	29	(0)	2559892
417	28.2	11.8	5.8	chr3	42926993	42927039	(155368520)	C	L2a	LINE/L2	(415)	3011	2964	2559891
2373	12.8	0.3	7.2	chr3	42927040	42927211	(155368348)	+	MLT1B	LTR/ERVL-MaLR	6	178	(212)	2559893
521	18.9	5.4	0.9	chr3	43584248	43584354	(154711205)	+	LTR18B	LTR/ERVL	1	112	(502)	2560826
1592	12.0	11.6	0.3	chr3	43584379	43584670	(154710889)	+	LTR18B	LTR/ERVL	286	614	(0)	2560826
521	27.9	2.4	5.5	chr3	43622605	43622858	(154672701)	+	L2a	LINE/L2	2996	3241	(185)	2560883
2279	21.6	7.0	0.8	chr3	43632177	43632658	(154662901)	+	LTR33	LTR/ERVL	2	515	(0)	2560905
2026	21.0	10.3	1.0	chr3	43638802	43639286	(154656273)	C	MLT1F1	LTR/ERVL-MaLR	(24)	545	11	2560919
2423	6.8	1.7	0.0	chr3	43690061	43690354	(154605205)	C	AluSp	SINE/Alu	(14)	299	1	2560994
243	23.5	4.5	3.4	chr3	43771002	43771089	(154524470)	+	MamRep1879	DNA/hAT-Tip100?	38	126	(90)	2561137
338	27.4	3.6	0.9	chr3	43771141	43771247	(154524312)	+	MIRb	SINE/MIR	17	126	(142)	2561138
4308	8.9	3.0	2.7	chr3	44441213	44441528	(153854031)	C	MER41B	LTR/ERV1	(320)	314	1	2562107
288	25.4	6.3	6.9	chr3	44441529	44441540	(153854019)	C	L1ME3G	LINE/L1	(445)	479	468	2562106
208	34.8	2.8	0.0	chr3	44441542	44441610	(153853949)	C	MIRc	SINE/MIR	(129)	139	69	2562109
23	0.0	0.0	0.0	chr3	44975748	44975772	(153319787)	+	(TC)n	Simple_repeat	1	25	(0)	2562980
38	0.0	0.0	0.0	chr3	44975773	44975805	(153319754)	+	(CA)n	Simple_repeat	1	33	(0)	2562981
321	2.6	0.0	0.0	chr3	45061246	45061284	(153234275)	+	MER4C	LTR/ERV1	1	39	(426)	2563146
3845	11.1	0.7	2.0	chr3	45061285	45061704	(153233855)	+	MER41A	LTR/ERV1	1	415	(139)	2563147
4406	10.4	2.8	0.2	chr3	45064653	45065269	(153230290)	C	MER41B	LTR/ERV1	(0)	634	1	2563155
16	19.2	2.0	3.9	chr3	45146457	45146507	(153149052)	+	(CCTCCT)n	Simple_repeat	1	52	(0)	2563314
16	0.0	0.0	0.0	chr3	45210765	45210782	(153084777)	+	(CT)n	Simple_repeat	1	18	(0)	2563443
16	16.8	0.0	0.0	chr3	45210793	45210820	(153084739)	+	(GT)n	Simple_repeat	1	28	(0)	2563444
12	14.4	3.0	2.9	chr3	45270068	45270100	(153025459)	+	(CCACTC)n	Simple_repeat	1	34	(0)	2563554
14	19.1	0.0	2.6	chr3	45388444	45388481	(152907078)	+	(GCCCC)n	Simple_repeat	1	38	(0)	2563751
435	25.8	13.1	8.2	chr3	46404085	46404220	(151891339)	+	L4_C_Mam	LINE/RTE-X	4662	4795	(343)	2565339
36	0.0	0.0	0.0	chr3	46404298	46404328	(151891231)	+	(TC)n	Simple_repeat	1	31	(0)	2565341
2279	11.7	0.0	1.0	chr3	46404329	46404636	(151890923)	C	AluSx1	SINE/Alu	(6)	306	2	2565342
1111	24.6	12.1	9.2	chr3	46441690	46441934	(151853625)	+	HAL1	LINE/L1	1729	1948	(559)	2565389
63	0.0	0.0	0.0	chr3	46441935	46441988	(151853571)	+	(GT)n	Simple_repeat	1	54	(0)	2565390
1111	24.6	12.1	9.2	chr3	46441989	46442342	(151853217)	+	HAL1	LINE/L1	1949	2348	(159)	2565389
13	22.5	2.0	3.9	chr3	46812591	46812640	(151482919)	+	G-rich	Low_complexity	1	51	(0)	2565967
36	0.0	2.4	2.4	chr3	47164013	47164053	(151131506)	+	(GCG)n	Simple_repeat	1	42	(0)	2566542
17	24.5	1.5	4.3	chr3	47164059	47164126	(151131433)	+	(TCCC)n	Simple_repeat	1	69	(0)	2566543
51	0.0	0.0	0.0	chr3	47443234	47443277	(150852282)	+	(AC)n	Simple_repeat	1	44	(0)	2567144
32	2.7	0.0	0.0	chr3	47443278	47443315	(150852244)	+	(TC)n	Simple_repeat	1	38	(0)	2567145
29	13.9	0.0	3.4	chr3	47475821	47475879	(150819680)	+	(GCG)n	Simple_repeat	1	59	(0)	2567225
13	18.8	0.0	5.0	chr3	47475977	47476016	(150819543)	+	(CGCCCTG)n	Simple_repeat	1	40	(0)	2567226
59	0.0	0.0	0.0	chr3	47600999	47601048	(150694511)	+	(GA)n	Simple_repeat	1	50	(0)	2567525
22	10.4	0.0	0.0	chr3	47601111	47601142	(150694417)	+	(T)n	Simple_repeat	1	32	(0)	2567526
49	10.7	0.0	0.0	chr3	48087706	48087778	(150207781)	+	(CA)n	Simple_repeat	1	73	(0)	2568627
13	7.0	6.2	2.9	chr3	49018144	49018175	(149277384)	+	(GCGAG)n	Simple_repeat	1	34	(0)	2570480
1744	17.3	0.4	0.0	chr3	49789824	49790095	(148505464)	+	AluJo	SINE/Alu	2	274	(38)	2571983
71	4.2	0.0	0.0	chr3	49790112	49790185	(148505374)	+	(TC)n	Simple_repeat	1	74	(0)	2571984
43	0.0	0.0	0.0	chr3	49790228	49790264	(148505295)	+	(CA)n	Simple_repeat	1	37	(0)	2571985
14	19.5	0.0	6.4	chr3	49803206	49803252	(148492307)	+	G-rich	Low_complexity	1	47	(0)	2572003
252	34.3	12.9	0.0	chr3	50328690	50328797	(147966762)	+	L2a	LINE/L2	3299	3422	(4)	2572913
198	34.1	2.1	0.0	chr3	50601787	50601877	(147693682)	C	L3b	LINE/CR1	(180)	5052	4960	2573271
18	25.1	1.9	1.8	chr3	51499927	51499980	(146795579)	+	(CA)n	Simple_repeat	1	55	(0)	2574460
17	13.4	2.9	2.8	chr3	51500024	51500058	(146795501)	+	(CG)n	Simple_repeat	1	36	(0)	2574461
92	14.5	0.0	0.0	chr3	52027907	52028057	(146267502)	+	(TCTC)n	Simple_repeat	1	151	(0)	2575341
2479	7.7	0.0	1.3	chr3	52028058	52028370	(146267189)	C	AluY	SINE/Alu	(0)	311	3	2575342
259	30.9	13.4	0.0	chr3	52188961	52189070	(146106489)	+	MIRb	SINE/MIR	40	166	(102)	2575554
1667	18.4	2.8	8.4	chr3	52189149	52189496	(146106063)	C	MLT2C1	LTR/ERVL	(1)	396	59	2575555
30	5.5	0.0	0.0	chr3	57016995	57017032	(141278527)	+	(CT)n	Simple_repeat	1	38	(0)	2583180
38	0.0	0.0	0.0	chr3	57017033	57017065	(141278494)	+	(CA)n	Simple_repeat	1	33	(0)	2583181
277	27.4	1.2	8.7	chr3	58650264	58650355	(139645204)	+	MLT1K	LTR/ERVL-MaLR	121	205	(390)	2586434
21	10.5	0.0	0.0	chr3	58650405	58650435	(139645124)	+	(GA)n	Simple_repeat	1	31	(0)	2586435
341	29.6	7.4	9.6	chr3	58650532	58650707	(139644852)	+	MLT1K	LTR/ERVL-MaLR	388	561	(34)	2586434
30	11.7	2.1	0.0	chr3	59001379	59001426	(139294133)	+	(TC)n	Simple_repeat	1	49	(0)	2586902
2157	8.9	0.4	2.5	chr3	59001429	59001708	(139293851)	C	AluSp	SINE/Alu	(37)	276	3	2586903
2368	17.4	0.9	1.4	chr3	60276608	60277033	(138018526)	C	MSTB	LTR/ERVL-MaLR	(0)	426	3	2588788
28	3.1	0.0	0.0	chr3	63245678	63245710	(135049849)	+	(AG)n	Simple_repeat	1	33	(0)	2593698
62	1.8	0.0	0.0	chr3	63245711	63245767	(135049792)	+	(GT)n	Simple_repeat	1	57	(0)	2593699
28	12.4	6.2	0.0	chr3	63895687	63895735	(134399824)	+	(TTCT)n	Simple_repeat	1	51	(0)	2594865
44	10.6	2.5	0.0	chr3	63895736	63895816	(134399743)	+	(TC)n	Simple_repeat	1	83	(0)	2594866
28	12.4	6.2	0.0	chr3	63895817	63895830	(134399729)	+	(TTCT)n	Simple_repeat	4	19	(0)	2594867
12	20.8	0.0	2.9	chr3	63895888	63895922	(134399637)	+	(TTCT)n	Simple_repeat	1	35	(0)	2594867
16	0.0	0.0	0.0	chr3	64906888	64906905	(133388654)	+	(GA)n	Simple_repeat	1	18	(0)	2596568
30	3.4	0.0	0.0	chr3	64906906	64906935	(133388624)	+	(GT)n	Simple_repeat	1	30	(0)	2596569
18	7.8	0.0	3.5	chr3	64907075	64907103	(133388456)	+	(AT)n	Simple_repeat	1	29	(0)	2596570
1857	16.6	1.3	2.2	chr3	65734173	65734486	(132561073)	+	AluJo	SINE/Alu	1	311	(1)	2597904
68	14.4	0.0	0.0	chr3	65734487	65734598	(132560961)	+	(GAGA)n	Simple_repeat	1	112	(0)	2597905
67	4.4	0.0	0.0	chr3	67023477	67023547	(131272012)	+	(AG)n	Simple_repeat	1	71	(0)	2600243
652	29.2	7.0	0.9	chr3	67023602	67023829	(131271730)	+	MIR	SINE/MIR	20	262	(0)	2600244
901	27.9	7.9	1.2	chr3	69144624	69145026	(129150533)	C	LTR33	LTR/ERVL	(83)	432	1	2603551
1525	18.0	8.7	1.4	chr3	71219452	71219811	(127075748)	+	Charlie5	DNA/hAT-Charlie	2236	2624	(0)	2606891
31	5.3	2.6	0.0	chr3	71226549	71226587	(127068972)	+	(TC)n	Simple_repeat	1	40	(0)	2606904
1377	23.8	3.2	6.9	chr3	72082831	72083219	(126212340)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	2608424
484	21.6	3.9	13.9	chr3	72154474	72154645	(126140914)	C	MLT1J	LTR/ERVL-MaLR	(127)	385	232	2608585
1173	20.2	8.2	12.9	chr3	72154668	72154846	(126140713)	+	MLT1B	LTR/ERVL-MaLR	2	181	(209)	2608586
37	11.4	0.0	0.0	chr3	72154847	72154905	(126140654)	+	(CT)n	Simple_repeat	1	59	(0)	2608587
1173	20.2	8.2	12.9	chr3	72154906	72155135	(126140424)	+	MLT1B	LTR/ERVL-MaLR	182	390	(0)	2608586
775	23.6	9.0	3.6	chr3	72253826	72254030	(126041529)	+	MLT1H	LTR/ERVL-MaLR	1	223	(326)	2608796
34	0.0	0.0	0.0	chr3	72254031	72254059	(126041500)	+	(CT)n	Simple_repeat	1	29	(0)	2608797
775	23.6	9.0	3.6	chr3	72254060	72254073	(126041486)	+	MLT1H	LTR/ERVL-MaLR	224	233	(316)	2608796
870	25.7	1.7	10.7	chr3	72254107	72254359	(126041200)	+	MLT1H	LTR/ERVL-MaLR	216	445	(104)	2608796
22	18.1	6.2	3.5	chr3	72290982	72291061	(126004498)	+	(AGAC)n	Simple_repeat	1	85	(0)	2608876
33	0.0	0.0	0.0	chr3	72291131	72291158	(126004401)	+	(AG)n	Simple_repeat	1	28	(0)	2608877
53	0.0	0.0	0.0	chr3	72539506	72539550	(125756009)	+	(TC)n	Simple_repeat	1	45	(0)	2609378
1407	22.9	6.6	10.9	chr3	72602630	72603040	(125692519)	+	MLT1F2	LTR/ERVL-MaLR	101	492	(68)	2609543
50	0.0	0.0	0.0	chr3	72603041	72603083	(125692476)	+	(GA)n	Simple_repeat	1	43	(0)	2609544
32	0.0	0.0	0.0	chr3	72603084	72603118	(125692441)	+	(TG)n	Simple_repeat	1	35	(0)	2609545
747	13.4	10.4	0.0	chr3	72603132	72603243	(125692316)	C	AluJr	SINE/Alu	(187)	125	1	2609546
331	27.6	3.9	4.8	chr3	72992166	72992268	(125303291)	+	MIR	SINE/MIR	28	129	(133)	2610381
25	4.3	3.5	8.3	chr3	72992269	72992326	(125303233)	+	(TTCT)n	Simple_repeat	1	60	(0)	2610382
19	24.3	4.2	2.7	chr3	72992327	72992339	(125303220)	+	(TTCC)n	Simple_repeat	1	74	(0)	2610383
34	0.0	0.0	0.0	chr3	72992342	72992370	(125303189)	+	(TC)n	Simple_repeat	1	29	(0)	2610384
2137	11.2	0.0	0.0	chr3	72992376	72992652	(125302907)	C	AluSq2	SINE/Alu	(36)	277	1	2610385
105	24.9	0.8	0.4	chr3	75671785	75672047	(122623512)	+	GA-rich	Low_complexity	1	265	(0)	2614564
17	0.0	0.0	0.0	chr3	77188950	77188968	(121106591)	+	(TG)n	Simple_repeat	1	19	(0)	2616551
37	2.9	0.0	0.0	chr3	77188969	77189004	(121106555)	+	(GA)n	Simple_repeat	1	36	(0)	2616552
1301	11.4	1.7	0.0	chr3	81768992	81769167	(116526392)	+	AluSc8	SINE/Alu	119	297	(14)	2622542
246	31.9	5.5	0.0	chr3	81769168	81769236	(116526323)	+	MER91A	DNA/hAT-Tip100	124	196	(0)	2622543
41	14.8	4.7	0.0	chr3	81769241	81769325	(116526234)	+	(TCTC)n	Simple_repeat	1	89	(0)	2622544
259	36.4	10.5	4.1	chr3	94136022	94136508	(104159051)	+	L2	LINE/L2	2478	2999	(420)	2633891
560	19.4	3.1	4.7	chr3	94139107	94139235	(104156324)	+	FLAM_A	SINE/Alu	1	127	(15)	2633900
53	0.0	0.0	0.0	chr3	94139236	94139280	(104156279)	+	(AG)n	Simple_repeat	1	45	(0)	2633901
17	12.7	0.0	0.0	chr3	94139289	94139314	(104156245)	+	(T)n	Simple_repeat	1	26	(0)	2633902
457	33.3	8.4	1.2	chr3	94139318	94139572	(104155987)	+	L4_C_Mam	LINE/RTE-X	4245	4519	(619)	2633903
1664	14.9	12.1	12.8	chr3	95039693	95040123	(103255436)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2635005
4517	9.8	1.6	0.3	chr3	99776580	99777203	(98518356)	C	MER41B	LTR/ERV1	(0)	634	3	2640691
16	4.5	4.3	0.0	chr3	99845609	99845631	(98449928)	+	(TC)n	Simple_repeat	1	24	(0)	2640800
54	0.0	0.0	0.0	chr3	100021916	100021961	(98273598)	+	(TG)n	Simple_repeat	1	46	(0)	2641062
30	0.0	0.0	0.0	chr3	100021962	100021994	(98273565)	+	(AG)n	Simple_repeat	1	33	(0)	2641063
2521	9.5	1.0	0.0	chr3	101557088	101557391	(96738168)	+	AluSc	SINE/Alu	2	308	(1)	2643173
1658	15.3	7.8	21.9	chr3	101557392	101557810	(96737749)	C	MER83	LTR/ERV1	(96)	352	1	2643172
1109	22.1	1.3	12.2	chr3	101631538	101631872	(96663687)	+	AluJb	SINE/Alu	1	298	(4)	2643352
1102	11.4	1.3	1.3	chr3	101631887	101632044	(96663515)	C	AluSx	SINE/Alu	(8)	304	147	2643353
3604	12.4	3.0	1.1	chr3	101632045	101632597	(96662962)	+	LTR6A	LTR/ERV1	1	564	(0)	2643354
52313	17.9	1.7	1.8	chr3	101632600	101641508	(96654051)	+	HERVS71-int	LTR/ERV1	4	8909	(69)	2643354
3707	12.2	3.0	0.2	chr3	101641509	101642056	(96653503)	+	LTR6A	LTR/ERV1	1	564	(0)	2643355
712	20.8	2.6	7.5	chr3	101643829	101643989	(96651570)	+	L1M5	LINE/L1	5608	5760	(483)	2643340
4184	11.3	3.8	0.8	chr3	101643990	101644474	(96651085)	+	MER41B	LTR/ERV1	1	508	(126)	2643360
73	1.5	0.0	0.0	chr3	105754494	105754560	(92540999)	+	(AG)n	Simple_repeat	1	67	(0)	2648659
47	0.0	0.0	0.0	chr3	106131621	106131660	(92163899)	+	(CT)n	Simple_repeat	1	40	(0)	2649125
1109	27.3	10.3	0.7	chr3	106139420	106139962	(92155597)	C	Charlie21a	DNA/hAT-Charlie	(269)	944	344	2649133
22	15.8	0.0	4.3	chr3	106139998	106140043	(92155516)	+	GA-rich	Low_complexity	1	46	(0)	2649134
14	13.9	2.2	6.5	chr3	107524117	107524161	(90771398)	+	(AGGTGG)n	Simple_repeat	1	46	(0)	2651002
5838	20.1	7.3	4.8	chr3	108622251	108622836	(89672723)	C	L1M1	LINE/L1	(5207)	2358	1768	2652569
53	0.0	0.0	0.0	chr3	108622837	108622881	(89672678)	+	(TC)n	Simple_repeat	1	45	(0)	2652570
6720	16.9	6.2	0.9	chr3	108622882	108624196	(89671363)	C	L1M1	LINE/L1	(5798)	1767	22	2652569
225	27.5	12.2	4.7	chr3	108630752	108631007	(89664552)	C	HAL1	LINE/L1	(0)	2507	2230	2652581
56	0.0	0.0	0.0	chr3	108631009	108631056	(89664503)	+	(AC)n	Simple_repeat	1	48	(0)	2652582
35	0.0	0.0	0.0	chr3	108631057	108631094	(89664465)	+	(TC)n	Simple_repeat	1	38	(0)	2652583
890	24.4	2.8	4.3	chr3	108631124	108631380	(89664179)	C	HAL1	LINE/L1	(669)	1838	1586	2652581
1487	25.8	9.1	7.5	chr3	110528902	110529449	(87766110)	+	MLT1F2	LTR/ERVL-MaLR	1	558	(2)	2655373
317	30.6	7.7	7.2	chr3	111496143	111496529	(86799030)	+	L1MC4	LINE/L1	331	719	(5496)	2656572
407	16.4	0.0	0.0	chr3	111496577	111496643	(86798916)	+	MER54B	LTR/ERVL	231	297	(496)	2656573
46	0.0	0.0	0.0	chr3	111496645	111496683	(86798876)	+	(TC)n	Simple_repeat	1	39	(0)	2656574
339	23.0	9.8	8.6	chr3	111496691	111496852	(86798707)	+	L1MC4	LINE/L1	694	857	(5358)	2656572
42	14.9	0.0	4.4	chr3	113652085	113652108	(84643451)	+	GA-rich	Low_complexity	1	24	(0)	2659517
37	0.0	0.0	0.0	chr3	113652109	113652140	(84643419)	+	(GT)n	Simple_repeat	1	32	(0)	2659518
42	14.9	0.0	4.4	chr3	113652141	113652205	(84643354)	+	GA-rich	Low_complexity	25	85	(0)	2659519
567	31.5	3.1	5.2	chr3	114153064	114153331	(84142228)	+	MIRb	SINE/MIR	7	268	(0)	2660369
58	1.5	2.9	2.8	chr3	114384101	114384170	(83911389)	+	(TC)n	Simple_repeat	1	72	(0)	2660681
107	22.7	2.0	0.4	chr3	114454929	114455183	(83840376)	+	GA-rich	Low_complexity	1	260	(0)	2660764
67	19.0	2.7	0.7	chr3	115100328	115100474	(83195085)	+	GA-rich	Low_complexity	1	151	(0)	2661646
26	23.7	4.1	6.5	chr3	115623333	115623479	(82672080)	+	GA-rich	Low_complexity	1	153	(0)	2662366
32	11.2	0.0	0.0	chr3	118633834	118633881	(79661678)	+	(GA)n	Simple_repeat	1	48	(0)	2666459
42	0.0	0.0	0.0	chr3	118633882	118633917	(79661642)	+	(GT)n	Simple_repeat	1	36	(0)	2666460
734	15.8	0.0	3.3	chr3	118911523	118911642	(79383917)	+	AluJr4	SINE/Alu	174	289	(23)	2666862
67	7.6	6.3	0.0	chr3	118911644	118911754	(79383805)	+	(GA)n	Simple_repeat	1	118	(0)	2666863
293	28.6	5.4	1.9	chr3	118911815	118911921	(79383638)	+	MIR3	SINE/MIR	92	202	(6)	2666864
188	19.6	4.2	2.1	chr3	119029099	119029145	(79266414)	C	L2a	LINE/L2	(5)	3421	3374	2667024
42	0.0	0.0	0.0	chr3	119029174	119029209	(79266350)	+	(AC)n	Simple_repeat	1	36	(0)	2667025
44	0.0	0.0	0.0	chr3	119029238	119029275	(79266284)	+	(AC)n	Simple_repeat	1	38	(0)	2667025
19	11.1	0.0	0.0	chr3	119029278	119029306	(79266253)	+	(GA)n	Simple_repeat	1	29	(0)	2667026
242	34.3	7.7	3.6	chr3	119332501	119332575	(78962984)	C	CR1-3_Croc	LINE/CR1	(984)	2621	2548	2667394
50	4.0	0.0	0.0	chr3	119332585	119332636	(78962923)	+	(TC)n	Simple_repeat	1	52	(0)	2667396
38	8.3	0.0	0.0	chr3	119332637	119332688	(78962871)	+	(AC)n	Simple_repeat	1	52	(0)	2667397
283	20.9	1.5	0.0	chr3	119589748	119589814	(78705745)	+	L2	LINE/L2	1433	1500	(1919)	2667846
22	5.9	5.3	2.5	chr3	119589835	119589872	(78705687)	+	(AG)n	Simple_repeat	1	40	(0)	2667847
19	3.6	3.5	0.0	chr3	119590110	119590138	(78705421)	+	(TTGT)n	Simple_repeat	1	30	(0)	2667848
707	21.8	7.4	1.5	chr3	119642071	119642274	(78653285)	C	MIRb	SINE/MIR	(15)	253	24	2667934
242	31.8	8.9	7.8	chr3	119676715	119676881	(78618678)	+	L2a	LINE/L2	3219	3426	(0)	2667997
27	0.0	6.1	0.0	chr3	119677004	119677036	(78618523)	+	(GGGGC)n	Simple_repeat	1	35	(0)	2667998
1932	13.5	11.9	4.8	chr3	120033594	120033989	(78261570)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2668522
776	27.4	6.6	8.1	chr3	120125160	120125529	(78170030)	C	L1ME4b	LINE/L1	(58)	834	471	2668682
53	0.0	0.0	0.0	chr3	120125711	120125755	(78169804)	+	(AG)n	Simple_repeat	1	45	(0)	2668683
231	36.1	1.8	1.8	chr3	120125761	120125870	(78169689)	C	MER5B	DNA/hAT-Charlie	(9)	169	60	2668684
13	5.3	0.0	0.0	chr3	120908373	120908392	(77387167)	+	(CGC)n	Simple_repeat	1	20	(0)	2669849
24	9.5	0.0	0.0	chr3	120908416	120908449	(77387110)	+	(TG)n	Simple_repeat	1	34	(0)	2669850
25	10.6	0.0	0.0	chr3	120908449	120908489	(77387070)	+	(GAGAGA)n	Simple_repeat	1	41	(0)	2669851
2206	14.0	9.3	1.8	chr3	122572926	122573324	(75722235)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2672239
17	5.0	0.0	0.0	chr3	122576431	122576451	(75719108)	+	(AG)n	Simple_repeat	1	21	(0)	2672247
488	23.9	5.9	7.6	chr3	122576638	122576809	(75718750)	+	LTR33	LTR/ERVL	45	213	(302)	2672248
66	0.0	0.0	0.0	chr3	123030623	123030678	(75264881)	+	(TC)n	Simple_repeat	1	56	(0)	2673005
15	0.0	0.0	0.0	chr3	123030686	123030702	(75264857)	+	(TG)n	Simple_repeat	1	17	(0)	2673006
41	0.0	0.0	0.0	chr3	123346608	123346642	(74948917)	+	(TC)n	Simple_repeat	1	35	(0)	2673554
18	4.5	0.0	0.0	chr3	123346643	123346665	(74948894)	+	(GT)n	Simple_repeat	1	23	(0)	2673555
16	22.7	5.0	3.2	chr3	123884399	123884458	(74411101)	+	GA-rich	Low_complexity	1	63	(0)	2674441
390	24.5	13.3	5.8	chr3	124809446	124809653	(73485906)	+	L2c	LINE/L2	2923	3148	(239)	2675896
35	6.9	0.0	0.0	chr3	125179705	125179750	(73115809)	+	(GA)n	Simple_repeat	1	46	(0)	2676575
590	28.3	6.5	1.1	chr3	125208477	125208665	(73086894)	C	MIR	SINE/MIR	(19)	243	44	2676629
53	0.0	0.0	0.0	chr3	125208748	125208792	(73086767)	+	(AC)n	Simple_repeat	1	45	(0)	2676630
30	0.0	0.0	0.0	chr3	125208793	125208825	(73086734)	+	(GA)n	Simple_repeat	1	33	(0)	2676631
268	32.0	12.4	5.5	chr3	126956406	126956570	(71338989)	+	MIRb	SINE/MIR	71	248	(20)	2679324
33	0.0	0.0	0.0	chr3	126956601	126956628	(71338931)	+	(GA)n	Simple_repeat	1	28	(0)	2679325
35	2.3	2.1	2.1	chr3	127481390	127481427	(70814132)	+	(AC)n	Simple_repeat	1	38	(0)	2680104
48	0.0	0.0	0.0	chr3	127481428	127481468	(70814091)	+	(AG)n	Simple_repeat	1	41	(0)	2680105
181	28.4	13.0	2.9	chr3	127481546	127481614	(70813945)	C	MIRb	SINE/MIR	(60)	208	132	2680106
53	2.0	0.0	0.0	chr3	127565054	127565103	(70730456)	+	(TC)n	Simple_repeat	1	50	(0)	2680272
15	21.5	6.0	1.9	chr3	127748343	127748392	(70547167)	+	GA-rich	Low_complexity	1	53	(0)	2680595
55	3.7	0.0	0.0	chr3	127748394	127748449	(70547110)	+	(GA)n	Simple_repeat	1	56	(0)	2680596
1592	16.7	13.8	0.9	chr3	127748464	127748802	(70546757)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	2680597
226	31.3	4.2	0.9	chr3	128474894	128475009	(69820550)	C	L1PB	LINE/L1	(1300)	4846	4727	2681786
18	4.3	0.0	3.9	chr3	128475020	128475038	(69820521)	+	(TC)n	Simple_repeat	1	19	(0)	2681787
43	0.0	0.0	0.0	chr3	128475039	128475075	(69820484)	+	(CA)n	Simple_repeat	1	37	(0)	2681788
21	26.2	1.8	6.1	chr3	128492902	128493013	(69802546)	+	G-rich	Low_complexity	1	114	(0)	2681802
222	17.5	19.8	4.5	chr3	128679886	128680004	(69615555)	+	MIRc	SINE/MIR	60	203	(65)	2682208
20	8.0	0.0	0.0	chr3	128680018	128680044	(69615515)	+	(GT)n	Simple_repeat	1	27	(0)	2682209
2173	10.3	0.3	0.7	chr3	128680066	128680347	(69615212)	C	AluSp	SINE/Alu	(30)	283	3	2682210
2292	10.6	0.0	0.0	chr3	129399073	129399375	(68896184)	+	AluSx1	SINE/Alu	1	303	(9)	2683665
26	2.8	2.6	2.6	chr3	129607107	129607144	(68688415)	+	(TCTCTGCG)n	Simple_repeat	1	39	(0)	2684063
14	22.4	2.4	0.0	chr3	129607184	129607225	(68688334)	+	(TTCTGC)n	Simple_repeat	1	43	(0)	2684064
53	30.4	3.4	1.6	chr3	129608608	129608844	(68686715)	+	(TCTC)n	Simple_repeat	1	245	(0)	2684067
1847	17.6	0.7	0.0	chr3	133741988	133742277	(64553282)	C	AluJo	SINE/Alu	(16)	296	5	2690452
2840	26.0	6.4	2.5	chr3	133742278	133742361	(64553198)	C	L1M5	LINE/L1	(2577)	3569	3485	2690450
38	18.4	1.2	0.0	chr3	133742413	133742492	(64553067)	+	GA-rich	Low_complexity	1	81	(0)	2690453
24	24.1	4.4	2.1	chr3	133895487	133895577	(64399982)	+	GA-rich	Low_complexity	1	95	(0)	2690630
21	10.8	2.4	2.3	chr3	133895644	133895685	(64399874)	+	GA-rich	Low_complexity	1	43	(0)	2690631
14	17.2	1.6	9.4	chr3	133895749	133895811	(64399748)	+	G-rich	Low_complexity	1	64	(0)	2690632
13	14.0	0.0	5.7	chr3	133895850	133895884	(64399675)	+	(CGCCTG)n	Simple_repeat	1	35	(0)	2690633
1777	13.8	10.5	3.5	chr3	135572164	135572508	(62723051)	C	MSTA	LTR/ERVL-MaLR	(0)	428	57	2693044
2304	10.6	0.0	0.7	chr3	136086920	136087221	(62208338)	+	AluSp	SINE/Alu	1	300	(13)	2693765
63	0.0	0.0	0.0	chr3	136087246	136087299	(62208260)	+	(TC)n	Simple_repeat	1	54	(0)	2693766
15	5.8	10.5	2.4	chr3	136751804	136751841	(61543718)	+	G-rich	Low_complexity	1	42	(0)	2695002
13	9.8	9.1	0.0	chr3	136752057	136752089	(61543470)	+	(GCTC)n	Simple_repeat	1	36	(0)	2695003
647	22.1	6.8	0.8	chr3	136767990	136768170	(61527389)	+	MLT1A	LTR/ERVL-MaLR	1	187	(187)	2695038
16	13.2	0.0	0.0	chr3	136768246	136768270	(61527289)	+	(TC)n	Simple_repeat	1	25	(0)	2695039
860	25.4	0.0	1.1	chr3	136768293	136768479	(61527080)	+	MLT1A	LTR/ERVL-MaLR	190	374	(0)	2695038
27	13.0	0.0	0.0	chr3	136802777	136802818	(61492741)	+	(TG)n	Simple_repeat	1	42	(0)	2695123
29	11.6	2.1	0.0	chr3	136802818	136802864	(61492695)	+	(GA)n	Simple_repeat	1	48	(0)	2695124
23	31.0	0.0	0.0	chr3	136802819	136802852	(61492707)	+	(TGAG)n	Simple_repeat	1	76	(0)	2695125
32	7.8	0.0	0.0	chr3	136958912	136958952	(61336607)	+	(TC)n	Simple_repeat	1	41	(0)	2695413
589	14.9	7.0	0.0	chr3	138136468	138136574	(60158985)	+	MLT1A	LTR/ERVL-MaLR	1	115	(259)	2697017
19	0.0	0.0	0.0	chr3	138136598	138136618	(60158941)	+	(TC)n	Simple_repeat	1	21	(0)	2697018
429	10.6	5.7	0.0	chr3	138136671	138136736	(60158823)	+	MLT1A	LTR/ERVL-MaLR	305	374	(0)	2697017
2065	11.7	3.7	7.8	chr3	138153601	138153998	(60141561)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2697053
271	27.1	9.2	0.8	chr3	138609349	138609478	(59686081)	C	L1ME4a	LINE/L1	(16)	6108	5967	2697790
95	3.0	0.0	2.8	chr3	138609534	138609641	(59685918)	+	(CT)n	Simple_repeat	1	108	(0)	2697791
435	27.2	13.0	0.0	chr3	138876338	138876484	(59419075)	C	MIRb	SINE/MIR	(13)	255	87	2698398
2079	6.9	10.8	0.0	chr3	138876636	138876909	(59418650)	+	AluSp	SINE/Alu	1	307	(6)	2698399
18	6.3	5.9	0.0	chr3	139428040	139428073	(58867486)	+	(GAGAGG)n	Simple_repeat	1	36	(0)	2699286
65	1.6	1.6	0.0	chr3	139428080	139428142	(58867417)	+	(GA)n	Simple_repeat	1	64	(0)	2699287
496	27.0	11.4	1.2	chr3	139428219	139428383	(58867176)	+	MIRb	SINE/MIR	64	247	(21)	2699288
44	4.4	0.0	0.0	chr3	140305009	140305055	(57990504)	+	(CA)n	Simple_repeat	1	47	(0)	2700641
35	14.0	2.6	3.9	chr3	140305056	140305131	(57990428)	+	(TC)n	Simple_repeat	1	78	(0)	2700642
14	12.6	5.7	0.0	chr3	140305232	140305266	(57990293)	+	(TATATAA)n	Simple_repeat	1	37	(0)	2700643
51	3.9	0.0	0.0	chr3	140692511	140692563	(57602996)	+	(AC)n	Simple_repeat	1	53	(0)	2701170
24	3.5	0.0	0.0	chr3	140692564	140692592	(57602967)	+	(GA)n	Simple_repeat	1	29	(0)	2701171
3986	13.8	4.5	2.8	chr3	141312045	141312735	(56982824)	C	LTR62	LTR/ERVL	(5)	704	1	2702098
2395	14.1	0.7	9.1	chr3	141647666	141648117	(56647442)	C	MLT2D	LTR/ERVL	(0)	414	1	2702629
1370	22.1	4.4	8.2	chr3	141658857	141659066	(56636493)	C	MLT1D	LTR/ERVL-MaLR	(69)	436	219	2702646
85	0.0	1.3	0.0	chr3	141659067	141659142	(56636417)	+	(TC)n	Simple_repeat	1	77	(0)	2702647
1370	22.1	4.4	8.2	chr3	141659143	141659385	(56636174)	C	MLT1D	LTR/ERVL-MaLR	(287)	218	2	2702646
6033	15.4	4.3	5.1	chr3	141701239	141702555	(56593004)	C	HERVFH21-int	LTR/ERV1	(5063)	1591	1	2702707
2580	11.7	12.9	1.4	chr3	141702556	141702980	(56592579)	C	LTR21A	LTR/ERV1	(0)	481	1	2702707
1855	20.4	5.3	0.0	chr3	141809923	141810295	(56485264)	+	MLT2D	LTR/ERVL	1	394	(20)	2702907
48	22.9	1.8	0.9	chr3	141810296	141810409	(56485150)	+	(CT)n	Simple_repeat	1	116	(0)	2702908
214	22.0	0.0	0.0	chr3	142982200	142982249	(55313310)	C	MIRb	SINE/MIR	(47)	221	172	2705014
14	26.9	4.6	1.5	chr3	142982267	142982331	(55313228)	+	GA-rich	Low_complexity	1	68	(0)	2705015
18	0.0	0.0	0.0	chr3	142982331	142982350	(55313209)	+	(AC)n	Simple_repeat	1	20	(0)	2705016
36	2.9	0.0	0.0	chr3	142982351	142982385	(55313174)	+	(AG)n	Simple_repeat	1	35	(0)	2705017
260	31.6	3.0	1.0	chr3	142982387	142982485	(55313074)	C	MIRb	SINE/MIR	(159)	109	9	2705014
180	22.9	0.0	0.0	chr3	143183644	143183678	(55111881)	+	OldhAT1	DNA/hAT-Ac	2259	2293	(555)	2705316
71	19.6	1.3	0.6	chr3	143183744	143183897	(55111662)	+	GA-rich	Low_complexity	1	156	(0)	2705317
15	16.6	0.0	0.0	chr3	143971976	143972002	(54323557)	+	(GC)n	Simple_repeat	1	27	(0)	2706424
23	3.3	0.0	2.9	chr3	143976532	143976555	(54319004)	+	(GT)n	Simple_repeat	1	24	(0)	2706427
35	0.0	0.0	0.0	chr3	143976556	143976585	(54318974)	+	(GA)n	Simple_repeat	1	30	(0)	2706428
185	26.2	9.7	3.7	chr3	149752626	149752732	(48542827)	C	L2a	LINE/L2	(6)	3420	3307	2714160
616	33.2	7.4	3.5	chr3	149852879	149853396	(48442163)	C	L1ME3G	LINE/L1	(184)	740	201	2714319
65	1.7	0.0	0.0	chr3	149853442	149853501	(48442058)	+	(GA)n	Simple_repeat	1	60	(0)	2714320
595	16.0	1.9	2.8	chr3	150077724	150077832	(48217727)	C	U13_	snRNA	(0)	108	1	2714640
19	8.1	0.0	0.0	chr3	150077857	150077882	(48217677)	+	(TC)n	Simple_repeat	1	26	(0)	2714641
41	0.0	0.0	0.0	chr3	150077883	150077917	(48217642)	+	(TG)n	Simple_repeat	1	35	(0)	2714642
328	22.3	3.1	1.1	chr3	150287429	150287523	(48008036)	C	MER94B	DNA/hAT-Blackjack	(6)	127	31	2714992
49	4.1	0.0	0.0	chr3	150287592	150287642	(48007917)	+	(TC)n	Simple_repeat	1	51	(0)	2714993
418	30.4	8.1	1.3	chr3	150287754	150287903	(48007656)	+	MIRc	SINE/MIR	2	162	(106)	2714994
29	5.6	0.0	0.0	chr3	150844109	150844145	(47451414)	+	(TC)n	Simple_repeat	1	37	(0)	2715936
51	0.0	3.9	0.0	chr3	150844146	150844196	(47451363)	+	(CA)n	Simple_repeat	1	53	(0)	2715937
54	0.0	0.0	0.0	chr3	151638254	151638299	(46657260)	+	(AC)n	Simple_repeat	1	46	(0)	2717064
23	14.5	0.0	0.0	chr3	151638300	151638337	(46657222)	+	(TC)n	Simple_repeat	1	38	(0)	2717065
1099	26.1	5.4	3.7	chr3	152176941	152177300	(46118259)	C	MLT1A	LTR/ERVL-MaLR	(1)	373	1	2717834
2310	14.4	14.3	0.0	chr3	152197848	152198284	(46097275)	C	LTR54	LTR/ERV1	(0)	510	1	2717866
1055	17.8	11.5	0.0	chr3	152271817	152272039	(46023520)	+	MER33	DNA/hAT-Charlie	2	246	(78)	2717976
36	0.0	0.0	0.0	chr3	152272040	152272070	(46023489)	+	(TC)n	Simple_repeat	1	31	(0)	2717977
1055	17.8	11.5	0.0	chr3	152272071	152272132	(46023427)	+	MER33	DNA/hAT-Charlie	247	323	(1)	2717976
29	15.7	0.0	0.0	chr3	152315846	152315866	(45979693)	+	(AC)n	Simple_repeat	1	21	(0)	2718019
33	2.8	2.8	0.0	chr3	152315867	152315902	(45979657)	+	(CT)n	Simple_repeat	1	37	(0)	2718020
29	15.7	0.0	0.0	chr3	152315903	152315932	(45979627)	+	(AC)n	Simple_repeat	2	31	(0)	2718021
257	23.2	13.8	0.0	chr3	152727420	152727531	(45568028)	+	L1M5	LINE/L1	5075	5204	(942)	2718587
81	2.6	0.0	0.0	chr3	152727672	152727749	(45567810)	+	(GA)n	Simple_repeat	1	78	(0)	2718590
14	7.2	0.0	8.6	chr3	153162083	153162117	(45133442)	+	(GCCCC)n	Simple_repeat	1	35	(0)	2719347
15	14.4	5.0	2.4	chr3	153162495	153162534	(45133025)	+	(CGC)n	Simple_repeat	1	42	(0)	2719348
245	21.4	3.7	1.1	chr3	153318783	153319425	(44976134)	+	GA-rich	Low_complexity	1	667	(0)	2719602
21	13.2	0.0	0.0	chr3	153319534	153319566	(44975993)	+	(A)n	Simple_repeat	1	33	(0)	2719603
2543	26.0	10.6	8.6	chr3	154238736	154239249	(44056310)	C	L2	LINE/L2	(2138)	1281	774	2720916
54	2.0	0.0	0.0	chr3	154239250	154239300	(44056259)	+	(GA)n	Simple_repeat	1	51	(0)	2720917
2543	26.0	10.6	8.6	chr3	154239301	154240037	(44055522)	C	L2	LINE/L2	(2646)	773	2	2720916
642	21.9	6.9	9.4	chr3	155060696	155060829	(43234730)	C	MLT1A0	LTR/ERVL-MaLR	(63)	302	161	2721981
46	2.3	0.0	0.0	chr3	155060830	155060873	(43234686)	+	(AG)n	Simple_repeat	1	44	(0)	2721982
642	21.9	6.9	9.4	chr3	155060874	155061035	(43234524)	C	MLT1A0	LTR/ERVL-MaLR	(205)	160	14	2721981
1880	19.0	5.8	0.5	chr3	155346980	155347155	(42948404)	C	MSTD	LTR/ERVL-MaLR	(0)	396	214	2722363
48	0.0	0.0	0.0	chr3	155347156	155347196	(42948363)	+	(GA)n	Simple_repeat	1	41	(0)	2722364
1880	19.0	5.8	0.5	chr3	155347197	155347394	(42948165)	C	MSTD	LTR/ERVL-MaLR	(183)	213	2	2722363
18	7.8	3.7	0.0	chr3	156484370	156484396	(41811163)	+	(AG)n	Simple_repeat	1	28	(0)	2724096
191	15.2	6.9	0.4	chr3	157071807	157072238	(41223321)	+	GA-rich	Low_complexity	1	462	(0)	2724929
18	7.6	0.0	0.0	chr3	157159984	157160011	(41135548)	+	(CGT)n	Simple_repeat	1	28	(0)	2725060
78	3.8	1.2	0.0	chr3	157252470	157252552	(41043007)	+	(AG)n	Simple_repeat	1	84	(0)	2725230
15	20.4	0.0	0.0	chr3	157252658	157252686	(41042873)	+	(TG)n	Simple_repeat	1	29	(0)	2725231
1045	32.8	15.5	4.1	chr3	157279033	157279678	(41015881)	C	L2c	LINE/L2	(974)	2445	1658	2725265
2765	25.8	12.9	6.0	chr3	157488167	157488910	(40806649)	+	L2	LINE/L2	1816	2566	(853)	2725577
46	2.3	0.0	0.0	chr3	157488911	157488954	(40806605)	+	(TC)n	Simple_repeat	1	44	(0)	2725578
2765	25.8	12.9	6.0	chr3	157488955	157489383	(40806176)	+	L2	LINE/L2	2567	3081	(338)	2725577
68	0.0	3.1	0.0	chr3	158106572	158106636	(40188923)	+	(AG)n	Simple_repeat	1	67	(0)	2726364
2186	12.1	4.2	1.4	chr3	158491941	158492310	(39803249)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2726872
15	0.0	0.0	0.0	chr3	160402238	160402254	(37893305)	+	(CA)n	Simple_repeat	1	17	(0)	2729737
26	0.0	0.0	0.0	chr3	160920587	160920615	(37374944)	+	(TC)n	Simple_repeat	1	29	(0)	2730559
56	1.9	0.0	0.0	chr3	160920616	160920667	(37374892)	+	(CA)n	Simple_repeat	1	52	(0)	2730560
990	19.9	4.8	11.3	chr3	161215104	161215438	(37080121)	+	MLT2B3	LTR/ERVL	1	312	(242)	2731002
2682	11.5	2.5	7.0	chr3	161215461	161215919	(37079640)	+	MER4B	LTR/ERV1	171	608	(2)	2731003
41	0.0	0.0	0.0	chr3	167876881	167876915	(30418644)	+	(TG)n	Simple_repeat	1	35	(0)	2739306
289	33.3	5.9	0.0	chr3	167876947	167877057	(30418502)	+	MLT1K	LTR/ERVL-MaLR	476	593	(2)	2739307
58	1.7	3.3	0.0	chr3	168211674	168211734	(30083825)	+	(AG)n	Simple_repeat	1	63	(0)	2739748
35	11.8	1.8	0.0	chr3	169147711	169147766	(29147793)	+	(GT)n	Simple_repeat	1	57	(0)	2740986
74	9.6	2.4	0.0	chr3	169663443	169663565	(28631994)	+	(CT)n	Simple_repeat	1	126	(0)	2741635
1520	21.5	2.7	8.3	chr3	169836299	169836694	(28458865)	C	MLT1A	LTR/ERVL-MaLR	(1)	373	1	2741892
1401	24.2	4.7	2.4	chr3	169836695	169836973	(28458586)	C	L2a	LINE/L2	(290)	3136	2848	2741891
2642	11.0	0.5	1.1	chr3	170699688	170700064	(27595495)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2743453
490	22.0	5.5	2.6	chr3	170814815	170814979	(27480580)	+	MamGypLTR2b	LTR/Gypsy	667	905	(17)	2743630
43	2.2	2.0	2.0	chr3	170815022	170815070	(27480489)	+	(TC)n	Simple_repeat	1	50	(0)	2743632
1685	16.0	4.7	0.8	chr3	170815075	170815337	(27480222)	C	AluJr	SINE/Alu	(37)	275	2	2743633
57	0.0	0.0	0.0	chr3	170852701	170852749	(27442810)	+	(AC)n	Simple_repeat	1	49	(0)	2743708
32	8.8	0.0	0.0	chr3	170852750	170852797	(27442762)	+	(GAGA)n	Simple_repeat	1	48	(0)	2743709
776	26.0	7.7	7.4	chr3	171294795	171295184	(27000375)	C	MLT1J1	LTR/ERVL-MaLR	(14)	430	40	2744309
19	6.1	5.9	0.0	chr3	171545471	171545504	(26750055)	+	(CAAA)n	Simple_repeat	1	36	(0)	2744731
20	7.8	0.0	0.0	chr3	171545613	171545639	(26749920)	+	(CT)n	Simple_repeat	1	27	(0)	2744732
34	0.0	0.0	0.0	chr3	171545644	171545672	(26749887)	+	(TG)n	Simple_repeat	1	29	(0)	2744733
231	20.3	0.0	6.3	chr3	171545811	171545873	(26749686)	C	MLT1K	LTR/ERVL-MaLR	(182)	413	355	2744734
30	19.1	3.0	0.0	chr3	171895397	171895462	(26400097)	+	(CT)n	Simple_repeat	1	68	(0)	2745252
26	23.3	1.5	1.5	chr3	172512653	172512719	(25782840)	+	(TC)n	Simple_repeat	1	68	(0)	2746204
441	28.5	8.9	8.6	chr3	172512784	172513037	(25782522)	+	MIRb	SINE/MIR	6	251	(11)	2746205
32	14.0	1.8	0.0	chr3	172562937	172562991	(25732568)	+	GA-rich	Low_complexity	1	56	(0)	2746307
2271	11.2	0.6	0.6	chr3	172712416	172712727	(25582832)	C	AluSq2	SINE/Alu	(0)	313	2	2746560
59	0.0	0.0	0.0	chr3	172712728	172712777	(25582782)	+	(CT)n	Simple_repeat	1	50	(0)	2746561
17	18.3	0.0	0.0	chr3	172712823	172712859	(25582700)	+	(ATGTTT)n	Simple_repeat	1	37	(0)	2746562
2213	10.6	1.4	0.0	chr3	172712875	172713167	(25582392)	C	AluSq2	SINE/Alu	(16)	297	1	2746563
16	0.0	8.7	0.0	chr3	173022051	173022073	(25273486)	+	(AG)n	Simple_repeat	1	25	(0)	2747027
489	28.2	3.0	0.0	chr3	173022213	173022343	(25273216)	+	LTR103_Mam	LTR/ERV1?	336	470	(5)	2747028
1460	9.9	6.7	0.9	chr3	173286589	173286800	(25008759)	+	AluY	SINE/Alu	70	294	(17)	2747356
31	11.2	0.0	0.0	chr3	173286801	173286850	(25008709)	+	(GAGA)n	Simple_repeat	1	50	(0)	2747357
294	26.8	5.2	1.6	chr3	177483446	177483574	(20811985)	+	MIR3	SINE/MIR	68	201	(7)	2753341
20	14.6	5.4	1.7	chr3	178058008	178058035	(20237524)	+	(TCTA)n	Simple_repeat	1	30	(0)	2754167
46	0.0	0.0	0.0	chr3	178058036	178058074	(20237485)	+	(TC)n	Simple_repeat	1	39	(0)	2754168
20	14.6	5.4	1.7	chr3	178058075	178058101	(20237458)	+	(TCTA)n	Simple_repeat	3	29	(0)	2754169
1108	19.4	8.3	0.0	chr3	178243473	178243694	(20051865)	+	MLT1A0	LTR/ERVL-MaLR	102	343	(22)	2754423
19	0.0	0.0	0.0	chr3	178243756	178243776	(20051783)	+	(CA)n	Simple_repeat	1	21	(0)	2754424
47	0.0	0.0	0.0	chr3	178243777	178243816	(20051743)	+	(GA)n	Simple_repeat	1	40	(0)	2754425
602	30.1	6.9	0.6	chr3	178654809	178654985	(19640574)	+	MIR	SINE/MIR	4	192	(70)	2754997
239	31.7	11.4	0.0	chr3	178654989	178655089	(19640470)	+	MIRb	SINE/MIR	145	258	(10)	2754998
60	3.4	0.0	0.0	chr3	178655090	178655149	(19640410)	+	(CT)n	Simple_repeat	1	60	(0)	2754999
40	4.5	2.1	0.0	chr3	181699496	181699542	(16596017)	+	(CT)n	Simple_repeat	1	48	(0)	2759743
965	24.9	5.3	15.2	chr3	183106797	183107122	(15188437)	C	L1MC4	LINE/L1	(85)	7957	7689	2762095
25	9.2	0.0	0.0	chr3	183298720	183298754	(14996805)	+	(CT)n	Simple_repeat	1	35	(0)	2762420
34	0.0	0.0	0.0	chr3	183298766	183298794	(14996765)	+	(CA)n	Simple_repeat	1	29	(0)	2762421
2409	12.7	11.7	0.8	chr3	183361331	183361711	(14933848)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2762537
18	20.0	2.5	0.0	chr3	183544708	183544747	(14750812)	+	(CT)n	Simple_repeat	1	41	(0)	2762874
59	1.9	0.0	0.0	chr3	183544750	183544804	(14750755)	+	(AC)n	Simple_repeat	1	55	(0)	2762875
446	34.1	5.9	1.5	chr3	183544814	183545087	(14750472)	+	MLT1K	LTR/ERVL-MaLR	145	431	(164)	2762876
59	31.2	2.3	0.5	chr3	183911484	183911518	(14384041)	+	(TCTC)n	Simple_repeat	1	35	(0)	2763643
41	0.0	2.6	0.0	chr3	183911519	183911557	(14384002)	+	(TC)n	Simple_repeat	1	40	(0)	2763644
1396	8.4	4.2	3.1	chr3	183911564	183911754	(14383805)	C	AluSq4	SINE/Alu	(118)	193	1	2763645
59	31.2	2.3	0.5	chr3	183911755	183911929	(14383630)	+	(TCTC)n	Simple_repeat	3	180	(0)	2763646
399	26.9	7.8	7.3	chr3	183988186	183988390	(14307169)	+	UCON78	DNA	111	316	(127)	2763776
11	16.9	2.9	2.8	chr3	183988405	183988439	(14307120)	+	A-rich	Low_complexity	1	36	(0)	2763777
2329	8.2	0.0	0.7	chr3	184298420	184298725	(13996834)	+	AluSx1	SINE/Alu	1	304	(8)	2764409
44	2.4	0.0	0.0	chr3	185117410	185117451	(13178108)	+	(CA)n	Simple_repeat	1	42	(0)	2765795
29	0.0	0.0	0.0	chr3	185117455	185117479	(13178080)	+	(AG)n	Simple_repeat	1	25	(0)	2765796
542	30.7	12.5	5.5	chr3	185117581	185118191	(13177368)	+	L2a	LINE/L2	2753	3426	(0)	2765797
656	25.9	4.2	0.6	chr3	185734217	185734427	(12561132)	C	MIRc	SINE/MIR	(45)	223	1	2766983
56	0.0	0.0	0.0	chr3	185811831	185811878	(12483681)	+	(TC)n	Simple_repeat	1	48	(0)	2767139
21	23.0	3.4	4.4	chr3	185825048	185825135	(12470424)	+	(CCGC)n	Simple_repeat	1	91	(0)	2767149
17	15.6	0.0	0.0	chr3	185825220	185825248	(12470311)	+	(CT)n	Simple_repeat	1	29	(0)	2767150
11	18.4	2.4	4.8	chr3	185825251	185825291	(12470268)	+	(GGCGGC)n	Simple_repeat	1	42	(0)	2767151
16	18.1	0.0	6.1	chr3	185825360	185825408	(12470151)	+	(CCCCG)n	Simple_repeat	1	49	(0)	2767152
2746	5.6	0.3	0.3	chr3	185938494	185938799	(12356760)	+	AluY	SINE/Alu	1	306	(5)	2767402
1381	20.4	2.9	11.9	chr3	186483887	186484298	(11811261)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	2768425
1882	13.8	17.3	1.7	chr3	186851835	186852021	(11443538)	C	MSTA	LTR/ERVL-MaLR	(0)	428	218	2769115
30	3.5	0.0	0.0	chr3	186852022	186852051	(11443508)	+	(GA)n	Simple_repeat	1	30	(0)	2769116
1882	13.8	17.3	1.7	chr3	186852052	186852223	(11443336)	C	MSTA	LTR/ERVL-MaLR	(211)	217	2	2769115
1313	25.4	6.0	1.2	chr3	186879597	186879995	(11415564)	+	L1ME3E	LINE/L1	5448	5866	(376)	2769168
767	28.9	7.2	1.5	chr3	186880049	186880375	(11415184)	+	HAL1	LINE/L1	11	357	(2150)	2769169
2034	14.3	4.7	8.8	chr3	187146340	187146737	(11148822)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2769661
2136	15.1	10.1	3.3	chr3	187146738	187146769	(11148790)	C	L1MD1	LINE/L1	(1210)	4936	4911	2769659
38	0.0	0.0	0.0	chr3	187292016	187292048	(11003511)	+	(TG)n	Simple_repeat	1	33	(0)	2769898
21	7.5	0.0	0.0	chr3	187292049	187292076	(11003483)	+	(AG)n	Simple_repeat	1	28	(0)	2769899
14	26.0	1.7	3.3	chr3	187737285	187737343	(10558216)	+	A-rich	Low_complexity	1	60	(0)	2770626
62	13.5	2.6	1.7	chr3	187737321	187737437	(10558122)	+	GA-rich	Low_complexity	1	120	(0)	2770627
99	12.1	0.0	1.3	chr3	188178960	188179116	(10116443)	+	(GA)n	Simple_repeat	1	157	(0)	2771431
683	22.6	2.5	0.6	chr3	191491562	191491721	(6803838)	+	MER20	DNA/hAT-Charlie	3	165	(54)	2776595
24	0.0	0.0	0.0	chr3	191491729	191491755	(6803804)	+	(TC)n	Simple_repeat	1	27	(0)	2776596
46	0.0	0.0	0.0	chr3	191491756	191491794	(6803765)	+	(CA)n	Simple_repeat	1	39	(0)	2776597
229	20.0	2.0	0.0	chr3	191491815	191491864	(6803695)	+	MER20	DNA/hAT-Charlie	168	218	(1)	2776598
1142	25.8	3.5	4.6	chr3	193836835	193837204	(4458355)	C	MLT1A	LTR/ERVL-MaLR	(4)	370	5	2780086
15	13.7	0.0	0.0	chr3	193841820	193841843	(4453716)	+	(GA)n	Simple_repeat	1	24	(0)	2780095
763	24.8	6.9	4.6	chr3	193992508	193992748	(4302811)	+	LTR16	LTR/ERVL	61	307	(131)	2780331
119	8.1	7.7	0.0	chr3	193992750	193992958	(4302601)	+	GA-rich	Low_complexity	1	225	(0)	2780332
184	36.5	0.0	0.0	chr3	194070556	194070629	(4224930)	+	MIR3	SINE/MIR	50	123	(85)	2780481
17	20.5	0.0	0.0	chr3	194079670	194079703	(4215856)	+	GA-rich	Low_complexity	1	34	(0)	2780498
14	4.3	4.2	0.0	chr3	194166776	194166799	(4128760)	+	(CCCG)n	Simple_repeat	1	25	(0)	2780663
25	24.6	1.6	0.0	chr3	194224572	194224634	(4070925)	+	(CA)n	Simple_repeat	1	64	(0)	2780774
2546	13.5	1.4	0.2	chr3	194258391	194258805	(4036754)	+	L1MB8	LINE/L1	5759	6178	(0)	2780833
1997	18.2	7.3	2.5	chr3	194260011	194260415	(4035144)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	2780838
509	30.6	7.5	1.1	chr3	194975665	194975839	(3319720)	+	MIR3	SINE/MIR	3	189	(19)	2782167
37	0.0	0.0	0.0	chr3	194975841	194975872	(3319687)	+	(TC)n	Simple_repeat	1	32	(0)	2782168
28	0.0	0.0	0.0	chr3	194975873	194975903	(3319656)	+	(AC)n	Simple_repeat	1	31	(0)	2782169
664	14.3	19.4	0.0	chr3	195116319	195116451	(3179108)	C	MER5A1	DNA/hAT-Charlie	(0)	166	2	2782377
1854	13.7	10.6	10.8	chr3	195140449	195140874	(3154685)	C	MSTA	LTR/ERVL-MaLR	(3)	425	1	2782420
56	19.6	0.0	0.9	chr3	195150758	195150869	(3144690)	+	(CA)n	Simple_repeat	1	112	(0)	2782436
28	26.9	0.0	0.0	chr3	195150839	195150909	(3144650)	+	(CT)n	Simple_repeat	1	71	(0)	2782437
813	29.2	4.3	9.7	chr3	195163726	195164146	(3131413)	C	MLT1J	LTR/ERVL-MaLR	(115)	397	1	2782461
20	7.8	0.0	0.0	chr3	195204442	195204468	(3091091)	+	(AC)n	Simple_repeat	1	27	(0)	2782536
38	2.8	0.0	0.0	chr3	195204469	195204505	(3091054)	+	(CT)n	Simple_repeat	1	37	(0)	2782537
42	0.0	0.0	0.0	chr3	195252693	195252728	(3042831)	+	(CA)n	Simple_repeat	1	36	(0)	2782603
25	0.0	0.0	0.0	chr3	195252729	195252756	(3042803)	+	(GA)n	Simple_repeat	1	28	(0)	2782604
30	6.0	0.0	0.0	chr3	195584162	195584196	(2711363)	+	(GT)n	Simple_repeat	1	35	(0)	2783309
16	11.4	0.0	6.2	chr3	195584198	195584229	(2711330)	+	GA-rich	Low_complexity	1	32	(0)	2783310
1913	14.1	0.7	1.3	chr3	196141756	196142034	(2153525)	+	AluSz	SINE/Alu	7	285	(27)	2784329
30	3.5	0.0	0.0	chr3	196142035	196142064	(2153495)	+	(AG)n	Simple_repeat	1	30	(0)	2784330
1913	14.1	0.7	1.3	chr3	196142065	196142089	(2153470)	+	AluSz	SINE/Alu	286	309	(3)	2784329
14	21.4	2.4	2.3	chr3	196142090	196142131	(2153428)	+	GA-rich	Low_complexity	1	43	(0)	2784331
267	30.3	11.1	0.7	chr3	196193582	196193734	(2101825)	+	MIR	SINE/MIR	90	260	(2)	2784475
29	7.3	0.0	2.2	chr3	196194000	196194045	(2101514)	+	(AGGGC)n	Simple_repeat	1	46	(0)	2784476
3448	12.3	11.4	1.4	chr3	196842744	196843192	(1452367)	C	MER41B	LTR/ERV1	(124)	510	1	2785874
2252	24.8	3.7	4.0	chr3	196843223	196843275	(1452284)	C	LTR82A	LTR/ERVL	(0)	872	833	2785876
1823	14.7	4.2	0.0	chr3	196843276	196843568	(1451991)	C	AluJb	SINE/Alu	(4)	308	3	2785877
3951	9.5	1.1	2.8	chr3	197575912	197576475	(719084)	C	MER41A	LTR/ERV1	(0)	554	1	2787147
1363	21.9	5.0	5.8	chr3	197576476	197576533	(719026)	+	MLT2D	LTR/ERVL	321	370	(44)	2787144
54	3.8	0.0	0.0	chr3	197576534	197576588	(718971)	+	(CA)n	Simple_repeat	1	55	(0)	2787148
1363	21.9	5.0	5.8	chr3	197576589	197576637	(718922)	+	MLT2D	LTR/ERVL	371	413	(1)	2787144
244	18.6	0.0	7.8	chr4	1712911	1712974	(188501581)	+	MLT1F2	LTR/ERVL-MaLR	497	555	(5)	2790522
1855	13.3	0.0	11.3	chr4	3014297	3014511	(187200044)	C	AluJb	SINE/Alu	(12)	300	118	2792605
6291	11.7	1.8	5.1	chr4	3047339	3048223	(187166332)	+	LTR13_	LTR/ERVK	96	954	(0)	2792670
507	31.6	7.5	1.5	chr4	3323468	3323868	(186890687)	C	L1ME4b	LINE/L1	(201)	691	265	2793065
42	0.0	0.0	0.0	chr4	3323873	3323908	(186890647)	+	(GA)n	Simple_repeat	1	36	(0)	2793066
279	17.8	1.0	2.5	chr4	3725988	3726575	(186487980)	+	G-rich	Low_complexity	1	594	(0)	2793525
193	30.8	11.7	0.0	chr4	3726611	3726701	(186487854)	C	OldhAT1	DNA/hAT-Ac	(1685)	1163	1061	2793526
3166	11.8	0.7	0.7	chr4	4073397	4073857	(186140698)	+	HERVK-int	LTR/ERVK	5157	5617	(1919)	2794037
46	26.2	1.6	0.8	chr4	4073864	4073992	(186140563)	+	GA-rich	Low_complexity	1	131	(0)	2794038
498	19.0	3.9	1.0	chr4	4943614	4943714	(185270841)	C	MIR3	SINE/MIR	(41)	167	64	2795752
226	6.2	7.7	2.0	chr4	4943728	4943758	(185270797)	+	LTR13	LTR/ERVK	679	710	(297)	2795753
47	0.0	0.0	0.0	chr4	4943759	4943798	(185270757)	+	(CA)n	Simple_repeat	1	40	(0)	2795754
226	6.2	7.7	2.0	chr4	4943799	4943815	(185270740)	+	LTR13	LTR/ERVK	711	730	(277)	2795753
1708	16.7	4.5	4.5	chr4	6034823	6035105	(184179450)	+	MLT2D	LTR/ERVL	69	359	(55)	2797642
33	7.7	0.0	0.0	chr4	6035109	6035150	(184179405)	+	(CT)n	Simple_repeat	1	42	(0)	2797644
556	24.4	8.6	1.8	chr4	6035210	6035372	(184179183)	+	MIRb	SINE/MIR	80	254	(14)	2797645
572	24.6	17.0	3.5	chr4	6382511	6382622	(183831933)	+	L2a	LINE/L2	2452	2571	(848)	2798268
63	0.0	0.0	0.0	chr4	6382623	6382676	(183831879)	+	(TC)n	Simple_repeat	1	54	(0)	2798269
572	24.6	17.0	3.5	chr4	6382677	6382938	(183831617)	+	L2a	LINE/L2	2572	2887	(532)	2798268
1768	18.3	3.3	15.5	chr4	6568470	6568915	(183645640)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	2798628
1889	12.9	1.9	0.0	chr4	6640054	6640356	(183574199)	C	AluSz	SINE/Alu	(1)	311	3	2798791
270	26.0	5.0	0.0	chr4	7044016	7044111	(183170444)	C	MIRb	SINE/MIR	(133)	135	35	2799510
17	5.0	0.0	0.0	chr4	7969709	7969729	(182244826)	+	(TC)n	Simple_repeat	1	21	(0)	2801015
46	0.0	0.0	0.0	chr4	7969731	7969769	(182244786)	+	(AC)n	Simple_repeat	1	39	(0)	2801016
18	14.0	3.1	0.0	chr4	8001927	8001958	(182212597)	+	(CT)n	Simple_repeat	1	33	(0)	2801074
200	28.1	14.7	0.0	chr4	8002123	8002250	(182212305)	+	L2a	LINE/L2	2301	2450	(969)	2801075
67	1.6	0.0	0.0	chr4	8917813	8917874	(181296681)	+	(GA)n	Simple_repeat	1	62	(0)	2802471
23	0.0	0.0	0.0	chr4	9763696	9763720	(180450835)	+	(TC)n	Simple_repeat	1	25	(0)	2803577
51	0.0	0.0	0.0	chr4	9763721	9763764	(180450791)	+	(CA)n	Simple_repeat	1	44	(0)	2803578
312	26.5	4.6	0.0	chr4	9763774	9763856	(180450699)	+	MER58C	DNA/hAT-Charlie	129	215	(0)	2803579
606	30.4	7.9	0.9	chr4	9763858	9764171	(180450384)	+	MLT1L	LTR/ERVL-MaLR	219	556	(54)	2803580
636	27.3	7.8	6.7	chr4	9833615	9833944	(180380611)	+	LTR86B2	LTR/ERVL	32	365	(122)	2803719
687	27.0	17.7	4.3	chr4	9833965	9834362	(180380193)	+	L2a	LINE/L2	2915	3375	(0)	2803720
596	25.2	2.9	9.0	chr4	10495552	10495773	(179718782)	+	MLT1C	LTR/ERVL-MaLR	9	216	(289)	2804535
829	26.0	2.2	0.9	chr4	10495841	10496065	(179718490)	+	MLT1C	LTR/ERVL-MaLR	206	433	(34)	2804535
2364	29.0	13.1	5.9	chr4	10655122	10655334	(179559221)	+	L1ME3E	LINE/L1	4428	4614	(1532)	2804851
50	4.0	0.0	0.0	chr4	10655335	10655386	(179559169)	+	(AG)n	Simple_repeat	1	52	(0)	2804857
2364	29.0	13.1	5.9	chr4	10655387	10655637	(179558918)	+	L1ME3E	LINE/L1	4615	4893	(1253)	2804851
199	27.4	14.5	3.2	chr4	14904773	14904930	(175309625)	+	L2c	LINE/L2	2973	3151	(236)	2811772
26	3.0	2.9	0.0	chr4	14905020	14905053	(175309502)	+	(AG)n	Simple_repeat	1	35	(0)	2811773
246	35.8	2.6	9.1	chr4	14905140	14905348	(175309207)	+	L2c	LINE/L2	3183	3377	(10)	2811772
15	26.3	0.0	0.0	chr4	14948798	14948841	(175265714)	+	(TCCT)n	Simple_repeat	1	44	(0)	2811854
73	4.1	0.0	0.0	chr4	14948842	14948917	(175265638)	+	(TC)n	Simple_repeat	1	76	(0)	2811855
1395	18.1	6.3	1.6	chr4	14948918	14949160	(175265395)	C	AluJo	SINE/Alu	(57)	255	1	2811856
183	33.9	5.9	4.5	chr4	15234124	15234256	(174980299)	+	MIR3	SINE/MIR	42	176	(32)	2812309
23	10.6	2.4	0.0	chr4	15234310	15234350	(174980205)	+	(CTCT)n	Simple_repeat	1	42	(0)	2812310
383	31.2	8.4	2.4	chr4	15234423	15234635	(174979920)	C	MIRb	SINE/MIR	(15)	253	27	2812311
2553	24.1	5.6	14.6	chr4	17034971	17035900	(173178655)	C	L1MD2	LINE/L1	(49)	6310	5492	2815426
581	17.3	0.9	0.9	chr4	17761031	17761135	(172453420)	+	MER20	DNA/hAT-Charlie	112	216	(3)	2816874
18	4.5	0.0	0.0	chr4	17761244	17761266	(172453289)	+	(TC)n	Simple_repeat	1	23	(0)	2816875
884	19.8	6.0	4.6	chr4	17761272	17761467	(172453088)	+	MLT1B	LTR/ERVL-MaLR	192	390	(0)	2816876
29	7.9	0.0	0.0	chr4	18021687	18021727	(172192828)	+	(GCG)n	Simple_repeat	1	41	(0)	2817243
1953	13.3	15.7	3.0	chr4	24644152	24644480	(165570075)	+	MSTA	LTR/ERVL-MaLR	1	363	(65)	2827457
2477	8.6	0.0	0.0	chr4	24644481	24644783	(165569772)	C	AluSx1	SINE/Alu	(9)	303	1	2827458
51	3.9	0.0	0.0	chr4	25089215	25089267	(165125288)	+	(AG)n	Simple_repeat	1	53	(0)	2828277
207	28.8	10.6	6.4	chr4	25949195	25949365	(164265190)	C	L2a	LINE/L2	(320)	3106	2928	2830067
2186	16.5	7.5	2.5	chr4	25949403	25949843	(164264712)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	1	2830068
15477	14.5	4.6	10.3	chr4	26445852	26447561	(163766994)	+	L1PB3	LINE/L1	3227	4919	(1943)	2831056
61	3.1	0.0	2.9	chr4	26447562	26447631	(163766924)	+	(TC)n	Simple_repeat	1	70	(0)	2831058
626	11.8	1.1	0.0	chr4	26447633	26447725	(163766830)	C	AluSx	SINE/Alu	(36)	276	183	2831059
935	12.9	0.0	3.6	chr4	26447727	26447863	(163766692)	C	AluSx	SINE/Alu	(180)	132	1	2831059
436	30.1	7.7	3.5	chr4	26858026	26858225	(163356330)	C	MIRb	SINE/MIR	(31)	237	29	2831730
369	30.3	8.9	2.1	chr4	27348452	27348640	(162865915)	C	MIRb	SINE/MIR	(9)	259	57	2832473
35	0.0	0.0	0.0	chr4	27348731	27348760	(162865795)	+	(TC)n	Simple_repeat	1	30	(0)	2832474
513	21.1	9.0	4.9	chr4	32192313	32192495	(158022060)	+	MLT1A	LTR/ERVL-MaLR	1	177	(188)	2839125
30	17.5	1.7	0.0	chr4	32192496	32192553	(158022002)	+	(TC)n	Simple_repeat	1	59	(0)	2839126
840	22.2	0.6	0.6	chr4	32192578	32192749	(158021806)	+	MLT1A	LTR/ERVL-MaLR	190	361	(13)	2839125
467	19.6	0.0	4.9	chr4	37696816	37696917	(152517638)	C	LTR78	LTR/ERV1	(75)	1229	1133	2846512
21	0.0	0.0	0.0	chr4	37696966	37696988	(152517567)	+	(CT)n	Simple_repeat	1	23	(0)	2846513
1137	24.5	7.8	3.1	chr4	37697015	37697427	(152517128)	+	LTR16	LTR/ERVL	1	434	(4)	2846514
53	0.0	0.0	0.0	chr4	37810783	37810827	(152403728)	+	(GT)n	Simple_repeat	1	45	(0)	2846731
26	6.0	0.0	0.0	chr4	37810828	37810860	(152403695)	+	(GA)n	Simple_repeat	1	33	(0)	2846732
311	29.9	7.8	1.1	chr4	38131531	38131709	(152082846)	C	MIRb	SINE/MIR	(46)	222	31	2847256
312	20.2	9.2	0.0	chr4	38131696	38131784	(152082771)	+	MIRc	SINE/MIR	106	203	(65)	2847257
30	3.4	0.0	0.0	chr4	38243286	38243315	(151971240)	+	(AG)n	Simple_repeat	1	30	(0)	2847453
16	16.6	4.9	0.0	chr4	38489530	38489570	(151724985)	+	(CCTCT)n	Simple_repeat	1	43	(0)	2847863
55	7.2	1.4	0.0	chr4	38489600	38489672	(151724883)	+	(TC)n	Simple_repeat	1	74	(0)	2847864
2196	12.9	0.3	0.0	chr4	38615660	38615968	(151598587)	C	AluSz	SINE/Alu	(2)	310	1	2848093
21	4.0	0.0	0.0	chr4	38615989	38616014	(151598541)	+	(TG)n	Simple_repeat	1	26	(0)	2848094
17	12.1	0.0	7.1	chr4	38616018	38616059	(151598496)	+	GA-rich	Low_complexity	1	42	(0)	2848095
2134	16.4	3.9	2.4	chr4	38617277	38617636	(151596919)	+	MSTB1	LTR/ERVL-MaLR	1	366	(66)	2848099
44	7.5	0.0	0.0	chr4	38617637	38617692	(151596863)	+	(CT)n	Simple_repeat	1	56	(0)	2848100
2134	16.4	3.9	2.4	chr4	38617693	38617756	(151596799)	+	MSTB1	LTR/ERVL-MaLR	367	432	(0)	2848099
2301	14.1	0.0	0.0	chr4	38858438	38858741	(151355814)	+	AluSx1	SINE/Alu	1	304	(8)	2848516
85	4.7	0.0	0.0	chr4	38858742	38858831	(151355724)	+	(AG)n	Simple_repeat	1	90	(0)	2848517
89	1.2	0.0	1.1	chr4	38858833	38858919	(151355636)	+	(AAGA)n	Simple_repeat	1	87	(0)	2848518
546	28.1	15.4	1.0	chr4	38858994	38859187	(151355368)	C	MIR	SINE/MIR	(34)	228	2	2848519
34	4.9	0.0	0.0	chr4	38984308	38984349	(151230206)	+	(TC)n	Simple_repeat	1	42	(0)	2848764
41	0.0	0.0	0.0	chr4	38984350	38984384	(151230171)	+	(TG)n	Simple_repeat	1	35	(0)	2848765
2320	10.6	0.0	2.7	chr4	38988231	38988531	(151226024)	C	AluSx	SINE/Alu	(19)	293	1	2848770
196	27.2	0.0	15.6	chr4	38988681	38988776	(151225779)	+	L2c	LINE/L2	3291	3371	(16)	2848771
28	20.2	8.0	1.9	chr4	39182678	39182777	(151031778)	+	GA-rich	Low_complexity	1	108	(0)	2849140
407	16.9	3.3	4.3	chr4	39697330	39697422	(150517133)	+	MER5A	DNA/hAT-Charlie	1	92	(97)	2850241
36	0.0	0.0	0.0	chr4	39697442	39697472	(150517083)	+	(GT)n	Simple_repeat	1	31	(0)	2850242
25	0.0	0.0	0.0	chr4	39697473	39697499	(150517056)	+	(GA)n	Simple_repeat	1	27	(0)	2850243
38	17.0	5.8	0.0	chr4	40193474	40193560	(150020995)	+	GA-rich	Low_complexity	1	92	(0)	2851462
400	28.1	2.7	10.1	chr4	40203273	40203470	(150011085)	C	MER5A	DNA/hAT-Charlie	(5)	184	2	2851484
34	14.2	0.0	0.0	chr4	40203517	40203571	(150010984)	+	(TG)n	Simple_repeat	1	55	(0)	2851485
31	19.6	3.9	1.2	chr4	40213313	40213390	(150001165)	+	(TC)n	Simple_repeat	1	81	(0)	2851498
559	28.1	9.2	6.7	chr4	40213403	40213760	(150000795)	+	L4_B_Mam	LINE/RTE-X	2509	2876	(2065)	2851499
2485	8.1	0.0	0.3	chr4	40291964	40292289	(149922266)	C	AluSc	SINE/Alu	(0)	309	1	2851691
12	17.1	2.9	0.0	chr4	40292290	40292304	(149922251)	+	(TTTTC)n	Simple_repeat	5	19	(0)	2851692
584	27.6	10.8	6.1	chr4	40292331	40292795	(149921760)	C	MLT1J	LTR/ERVL-MaLR	(0)	448	20	2851693
28	19.6	0.0	0.0	chr4	40297614	40297666	(149916889)	+	(GT)n	Simple_repeat	1	53	(0)	2851700
46	8.2	1.5	0.0	chr4	40297666	40297730	(149916825)	+	(GA)n	Simple_repeat	1	66	(0)	2851701
258	17.2	7.5	13.0	chr4	40297996	40298044	(149916511)	C	L1ME4a	LINE/L1	(105)	6019	5979	2851702
43	9.9	0.0	0.0	chr4	40338828	40338892	(149875663)	+	(CTCT)n	Simple_repeat	1	65	(0)	2851784
16	0.0	0.0	0.0	chr4	40338892	40338909	(149875646)	+	(CA)n	Simple_repeat	1	18	(0)	2851785
2322	10.8	0.0	0.6	chr4	40338996	40339309	(149875246)	+	AluSx1	SINE/Alu	1	312	(0)	2851786
8498	5.1	0.0	3.0	chr4	48218949	48219944	(141994611)	+	LTR13A	LTR/ERVK	1	966	(0)	2863498
1807	17.1	1.1	1.4	chr4	52544650	52544936	(137669619)	+	AluJo	SINE/Alu	1	286	(26)	2866315
47	8.6	2.7	0.0	chr4	52545037	52545110	(137669445)	+	(CT)n	Simple_repeat	1	76	(0)	2866316
894	14.8	7.4	2.8	chr4	52545114	52545255	(137669300)	C	AluJr	SINE/Alu	(27)	285	137	2866317
182	21.2	0.0	0.0	chr4	52868375	52868407	(137346148)	C	MIR3	SINE/MIR	(90)	118	86	2866901
30	18.9	1.7	0.0	chr4	52868413	52868472	(137346083)	+	GA-rich	Low_complexity	1	61	(0)	2866902
53	3.8	0.0	0.0	chr4	53652021	53652074	(136562481)	+	(GA)n	Simple_repeat	1	54	(0)	2868012
745	32.2	8.2	4.7	chr4	54359541	54360013	(135854542)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	22	2869174
40	3.2	9.4	0.0	chr4	54369310	54369373	(135845182)	+	(CT)n	Simple_repeat	1	70	(0)	2869188
822	15.0	1.5	0.8	chr4	54369381	54369513	(135845042)	C	AluJo	SINE/Alu	(45)	267	134	2869189
14	10.1	6.2	0.0	chr4	54399299	54399330	(135815225)	+	(TTCTC)n	Simple_repeat	1	34	(0)	2869230
36	0.0	0.0	0.0	chr4	54399334	54399364	(135815191)	+	(GT)n	Simple_repeat	1	31	(0)	2869231
18	4.5	0.0	0.0	chr4	54399365	54399387	(135815168)	+	(AG)n	Simple_repeat	1	23	(0)	2869232
18	11.7	0.0	0.0	chr4	54512404	54512431	(135702124)	+	(AC)n	Simple_repeat	1	28	(0)	2869431
44	4.4	0.0	0.0	chr4	54512432	54512478	(135702077)	+	(AG)n	Simple_repeat	1	47	(0)	2869432
321	28.0	10.0	2.1	chr4	55648286	55648478	(134566077)	+	MLT1K	LTR/ERVL-MaLR	364	573	(22)	2871263
1845	12.6	6.0	4.3	chr4	56037077	56037450	(134177105)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2871897
60	4.8	0.0	0.0	chr4	56188623	56188687	(134025868)	+	(CT)n	Simple_repeat	1	65	(0)	2872200
23	0.0	0.0	0.0	chr4	56188688	56188712	(134025843)	+	(AC)n	Simple_repeat	1	25	(0)	2872201
22	0.0	0.0	0.0	chr4	56188712	56188735	(134025820)	+	(AG)n	Simple_repeat	1	24	(0)	2872202
1073	27.9	7.1	5.2	chr4	56476860	56477301	(133737254)	C	Tigger13a	DNA/TcMar-Tigger	(57)	714	283	2872670
1730	15.8	5.6	1.7	chr4	56477302	56477592	(133736963)	C	AluJr	SINE/Alu	(9)	303	1	2872671
20	13.7	0.0	0.0	chr4	56701774	56701805	(133512750)	+	(GA)n	Simple_repeat	1	32	(0)	2873093
49	25.2	3.5	0.0	chr4	61199939	61200082	(129014473)	+	GA-rich	Low_complexity	1	149	(0)	2879115
3975	15.0	1.3	2.5	chr4	67721249	67721661	(122492894)	+	LTR58	LTR/ERV1	1	409	(270)	2887371
4235	9.7	3.6	2.9	chr4	67721662	67722290	(122492265)	C	MER41B	LTR/ERV1	(0)	634	1	2887372
3975	15.0	1.3	2.5	chr4	67722291	67722558	(122491997)	+	LTR58	LTR/ERV1	410	673	(6)	2887371
3706	7.0	0.4	0.4	chr4	70732431	70732919	(119481636)	+	L1PA6	LINE/L1	5666	6154	(0)	2891072
1258	11.0	0.0	0.0	chr4	70732920	70733074	(119481481)	+	AluSg4	SINE/Alu	134	288	(22)	2891073
76	8.3	0.9	0.0	chr4	70733075	70733179	(119481376)	+	(GA)n	Simple_repeat	1	106	(0)	2891074
2319	8.4	0.3	0.7	chr4	71358033	71358329	(118856226)	+	AluSc8	SINE/Alu	1	296	(15)	2892118
17	6.4	2.5	9.8	chr4	71358330	71358358	(118856197)	+	GA-rich	Low_complexity	10	37	(0)	2892119
180	32.6	4.3	0.0	chr4	71466684	71466772	(118747783)	C	MIR3	SINE/MIR	(0)	208	116	2892247
410	25.2	4.5	3.6	chr4	71466790	71466931	(118747624)	+	LTR33	LTR/ERVL	20	157	(358)	2892248
51	2.1	0.0	0.0	chr4	71466932	71466979	(118747576)	+	(AG)n	Simple_repeat	1	48	(0)	2892249
323	30.4	21.2	2.7	chr4	71466980	71467196	(118747359)	+	LTR33	LTR/ERVL	152	412	(119)	2892248
287	29.6	0.0	0.0	chr4	72258204	72258291	(117956264)	+	MIRc	SINE/MIR	162	249	(19)	2893278
40	6.2	0.0	0.0	chr4	72258345	72258395	(117956160)	+	(GA)n	Simple_repeat	1	51	(0)	2893279
27	0.0	0.0	0.0	chr4	72258395	72258424	(117956131)	+	(GT)n	Simple_repeat	1	30	(0)	2893280
14	23.2	3.9	1.9	chr4	72569185	72569236	(117645319)	+	(AGCG)n	Simple_repeat	1	54	(0)	2893668
22	17.0	0.0	6.6	chr4	72569253	72569313	(117645242)	+	GA-rich	Low_complexity	1	61	(0)	2893669
13	19.2	6.1	1.9	chr4	72569320	72569368	(117645187)	+	(GCTGCTG)n	Simple_repeat	1	52	(0)	2893670
3374	16.6	3.6	4.6	chr4	73205325	73206397	(117008158)	+	L1MA8	LINE/L1	4749	5801	(490)	2894579
46	20.9	0.0	0.0	chr4	73206398	73206493	(117008062)	+	GA-rich	Low_complexity	1	96	(0)	2894581
2605	12.7	1.7	6.1	chr4	73206495	73206826	(117007729)	+	L1MA8	LINE/L1	5819	6135	(156)	2894579
3992	10.3	0.4	1.1	chr4	74096175	74096724	(116117831)	C	MER41B	LTR/ERV1	(88)	546	1	2895701
20	16.0	0.0	0.0	chr4	74379898	74379932	(115834623)	+	(TC)n	Simple_repeat	1	35	(0)	2896099
307	25.0	1.1	12.0	chr4	74379977	74380076	(115834479)	C	L2c	LINE/L2	(5)	3382	3294	2896100
1974	14.3	0.0	2.9	chr4	74449468	74449774	(115764781)	+	AluJb	SINE/Alu	5	302	(10)	2896210
509	20.2	12.6	14.6	chr4	74449775	74449869	(115764686)	C	MER58C	DNA/hAT-Charlie	(129)	86	1	2896209
33	0.0	0.0	0.0	chr4	74449906	74449933	(115764622)	+	(CT)n	Simple_repeat	1	28	(0)	2896211
14	19.5	0.0	0.0	chr4	74449941	74449971	(115764584)	+	(TATG)n	Simple_repeat	1	31	(0)	2896212
7089	19.1	2.0	0.2	chr4	74682583	74683833	(115530722)	C	L1MA2	LINE/L1	(6232)	1333	59	2896519
1796	17.4	8.2	2.8	chr4	75831954	75832390	(114382165)	+	MSTA1	LTR/ERVL-MaLR	1	463	(2)	2898178
298	29.2	6.7	2.9	chr4	76079678	76079850	(114134705)	C	L2	LINE/L2	(1435)	1984	1805	2898668
40	8.1	0.0	0.0	chr4	76079868	76079919	(114134636)	+	(TC)n	Simple_repeat	1	52	(0)	2898669
18	0.0	0.0	0.0	chr4	76079932	76079951	(114134604)	+	(AG)n	Simple_repeat	1	20	(0)	2898670
2315	11.3	4.5	4.2	chr4	78286977	78287356	(111927199)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2901945
22	14.9	0.0	0.0	chr4	78667074	78667110	(111547445)	+	(GT)n	Simple_repeat	1	37	(0)	2902518
17	11.2	0.0	0.0	chr4	78667110	78667139	(111547416)	+	(GAGA)n	Simple_repeat	1	30	(0)	2902519
219	34.4	4.3	7.1	chr4	78691909	78692077	(111522478)	C	L2c	LINE/L2	(228)	3159	2996	2902571
2420	22.5	11.7	16.7	chr4	78693589	78694457	(111520098)	C	LTR8B	LTR/ERV1	(0)	820	1	2902577
1273	28.5	1.3	0.0	chr4	78694460	78694768	(111519787)	C	HUERS-P1-int	LTR/ERV1	(3)	6260	5948	2902577
17	8.9	0.0	0.0	chr4	79287660	79287683	(110926872)	+	(TG)n	Simple_repeat	1	24	(0)	2903425
27	8.7	0.0	0.0	chr4	79287679	79287715	(110926840)	+	(GA)n	Simple_repeat	1	37	(0)	2903426
55	4.1	1.2	3.7	chr4	79400647	79400727	(110813828)	+	(AG)n	Simple_repeat	1	82	(0)	2903582
31	0.0	0.0	0.0	chr4	79632002	79632028	(110582527)	+	(TC)n	Simple_repeat	1	27	(0)	2903848
1458	23.8	12.5	0.7	chr4	79887455	79887930	(110326625)	+	MLT1F1	LTR/ERVL-MaLR	2	537	(23)	2904138
57	7.4	0.0	0.0	chr4	79915793	79915863	(110298692)	+	(TC)n	Simple_repeat	1	71	(0)	2904168
15	5.6	0.0	0.0	chr4	79915864	79915882	(110298673)	+	(AT)n	Simple_repeat	1	19	(0)	2904169
41	2.6	0.0	0.0	chr4	79931450	79931489	(110283066)	+	(TC)n	Simple_repeat	1	40	(0)	2904188
24	0.0	0.0	3.3	chr4	80195903	80195928	(110018627)	+	(AC)n	Simple_repeat	1	26	(0)	2904515
36	0.0	0.0	0.0	chr4	80195929	80195959	(110018596)	+	(AG)n	Simple_repeat	1	31	(0)	2904516
2508	13.1	10.5	0.5	chr4	81410729	81411113	(108803442)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2906080
1917	14.2	14.7	0.8	chr4	81745078	81745445	(108469110)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2906601
54	0.0	0.0	0.0	chr4	81789130	81789175	(108425380)	+	(GT)n	Simple_repeat	1	46	(0)	2906669
30	3.5	0.0	0.0	chr4	81789178	81789207	(108425348)	+	(AG)n	Simple_repeat	1	30	(0)	2906670
1503	22.0	1.4	0.8	chr4	81789209	81789561	(108424994)	C	MLT2D	LTR/ERVL	(55)	359	5	2906671
35	29.7	1.1	5.5	chr4	82373481	82373661	(107840894)	+	(CGC)n	Simple_repeat	1	183	(0)	2907493
19	30.4	3.9	1.9	chr4	82900921	82901024	(107313531)	+	(GCGTG)n	Simple_repeat	1	108	(0)	2908437
950	21.2	18.7	4.5	chr4	83036963	83037426	(107177129)	C	MLT1H	LTR/ERVL-MaLR	(4)	545	1	2908722
41	0.0	4.3	2.0	chr4	84479791	84479837	(105734718)	+	(CT)n	Simple_repeat	1	49	(0)	2911159
420	31.6	7.6	10.3	chr4	84695359	84695448	(105519107)	+	L2	LINE/L2	2675	2764	(655)	2911472
35	0.0	0.0	0.0	chr4	84695449	84695478	(105519077)	+	(GT)n	Simple_repeat	1	30	(0)	2911473
420	31.6	7.6	10.3	chr4	84695479	84695493	(105519062)	+	L2	LINE/L2	2765	2765	(654)	2911472
60	3.4	0.0	0.0	chr4	84695494	84695553	(105519002)	+	(AG)n	Simple_repeat	1	60	(0)	2911474
420	31.6	7.6	10.3	chr4	84695554	84695718	(105518837)	+	L2	LINE/L2	2765	2938	(481)	2911472
1680	15.9	0.9	0.9	chr4	85579723	85580039	(104634516)	C	L1MB8	LINE/L1	(290)	5888	5572	2912710
16	8.5	4.0	0.0	chr4	85580113	85580137	(104634418)	+	(TG)n	Simple_repeat	1	26	(0)	2912711
22	0.0	0.0	0.0	chr4	85580140	85580177	(104634378)	+	(GA)n	Simple_repeat	1	38	(0)	2912712
66	0.0	0.0	0.0	chr4	85827462	85827517	(104387038)	+	(GT)n	Simple_repeat	1	56	(0)	2913040
29	22.2	1.4	0.0	chr4	86908600	86908669	(103305886)	+	(CTCTCT)n	Simple_repeat	1	71	(0)	2914586
204	30.4	7.0	0.0	chr4	86908677	86908755	(103305800)	C	L2a	LINE/L2	(2)	3424	3340	2914587
496	21.4	13.6	1.4	chr4	86908767	86908908	(103305647)	C	LTR33C	LTR/ERVL	(83)	546	385	2914588
20	0.0	0.0	0.0	chr4	88231873	88231894	(101982661)	+	(TC)n	Simple_repeat	1	22	(0)	2916794
38	0.0	0.0	0.0	chr4	88231895	88231927	(101982628)	+	(TG)n	Simple_repeat	1	33	(0)	2916795
894	14.5	0.0	0.0	chr4	88231936	88232052	(101982503)	C	AluJr	SINE/Alu	(194)	118	2	2916796
1861	14.8	13.1	1.3	chr4	94594882	94595258	(95619297)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2925234
345	28.8	6.2	9.6	chr4	94902160	94902249	(95312306)	+	L1ME3Cz	LINE/L1	547	613	(384)	2925729
53	0.0	0.0	0.0	chr4	94902250	94902294	(95312261)	+	(AG)n	Simple_repeat	1	45	(0)	2925731
345	28.8	6.2	9.6	chr4	94902295	94902587	(95311968)	+	L1ME3Cz	LINE/L1	614	916	(81)	2925729
31	5.3	0.0	0.0	chr4	95448189	95448227	(94766328)	+	(TG)n	Simple_repeat	1	39	(0)	2926443
42	0.0	0.0	0.0	chr4	95448228	95448263	(94766292)	+	(GA)n	Simple_repeat	1	36	(0)	2926444
444	27.9	0.7	5.6	chr4	95448362	95448505	(94766050)	+	MIRc	SINE/MIR	98	234	(34)	2926445
29	0.0	0.0	0.0	chr4	98261351	98261378	(91953177)	+	(CCCGC)n	Simple_repeat	1	28	(0)	2929922
13	19.4	8.1	3.0	chr4	98261732	98261793	(91952762)	+	G-rich	Low_complexity	1	67	(0)	2929923
19	8.3	0.0	0.0	chr4	98485369	98485394	(91729161)	+	(GA)n	Simple_repeat	1	26	(0)	2930214
24	3.6	0.0	0.0	chr4	98515513	98515541	(91699014)	+	(CT)n	Simple_repeat	1	29	(0)	2930263
16	9.3	0.0	0.0	chr4	98515587	98515609	(91698946)	+	(AC)n	Simple_repeat	1	23	(0)	2930264
4364	8.5	0.0	0.0	chr4	99734372	99734925	(90479630)	C	MER41A	LTR/ERV1	(0)	554	1	2932029
651	31.4	3.0	0.0	chr4	99735063	99735256	(90479299)	C	MIRc	SINE/MIR	(36)	232	33	2932034
26	16.8	0.0	2.0	chr4	99815671	99815720	(90398835)	+	GA-rich	Low_complexity	1	50	(0)	2932162
15	26.6	0.0	0.0	chr4	102345350	102345394	(87869161)	+	(CTGT)n	Simple_repeat	1	45	(0)	2935547
18	17.0	0.0	0.0	chr4	102501328	102501360	(87713195)	+	GA-rich	Low_complexity	1	33	(0)	2935760
18	8.5	0.0	0.0	chr4	102502333	102502357	(87712198)	+	(CT)n	Simple_repeat	1	25	(0)	2935762
43	0.0	0.0	0.0	chr4	102502391	102502427	(87712128)	+	(CA)n	Simple_repeat	1	37	(0)	2935763
946	20.9	0.0	0.0	chr4	103091599	103091756	(87122799)	+	AluJo	SINE/Alu	137	294	(18)	2936617
34	4.0	7.7	0.0	chr4	104494918	104494969	(85719586)	+	(TC)n	Simple_repeat	1	56	(0)	2938272
13	13.0	0.0	7.7	chr4	104495055	104495093	(85719462)	+	G-rich	Low_complexity	1	39	(0)	2938273
31	17.6	3.3	5.3	chr4	105147970	105148053	(85066502)	+	(TC)n	Simple_repeat	1	83	(0)	2939091
30	3.5	0.0	0.0	chr4	105148054	105148083	(85066472)	+	(AC)n	Simple_repeat	1	30	(0)	2939092
434	33.1	4.7	0.6	chr4	105163508	105163671	(85050884)	C	MIR	SINE/MIR	(0)	262	92	2939113
57	0.0	0.0	0.0	chr4	105163807	105163855	(85050700)	+	(GA)n	Simple_repeat	1	49	(0)	2939114
29	0.0	0.0	0.0	chr4	105163856	105163887	(85050668)	+	(TG)n	Simple_repeat	1	32	(0)	2939115
2018	12.4	6.7	5.3	chr4	105163888	105164286	(85050269)	C	L1MA9	LINE/L1	(3)	6309	5905	2939116
51	2.1	0.0	0.0	chr4	105224685	105224732	(84989823)	+	(TC)n	Simple_repeat	1	48	(0)	2939196
95	2.3	0.0	0.0	chr4	105898291	105898380	(84316175)	+	(TC)n	Simple_repeat	1	90	(0)	2940143
1538	17.6	16.6	1.1	chr4	106389384	106389564	(83824991)	C	MSTA	LTR/ERVL-MaLR	(0)	428	228	2940763
35	0.0	0.0	0.0	chr4	106389565	106389594	(83824961)	+	(GA)n	Simple_repeat	1	30	(0)	2940764
1538	17.6	16.6	1.1	chr4	106389595	106389773	(83824782)	C	MSTA	LTR/ERVL-MaLR	(201)	227	2	2940763
440	26.4	4.6	2.6	chr4	108115735	108115840	(82098715)	C	MIR3	SINE/MIR	(15)	193	82	2942960
49	2.2	0.0	0.0	chr4	108115841	108115886	(82098669)	+	(AC)n	Simple_repeat	1	46	(0)	2942961
784	23.9	3.8	18.4	chr4	109185581	109186016	(81028539)	+	MLT1A	LTR/ERVL-MaLR	1	370	(4)	2944576
11	16.4	5.9	0.0	chr4	109560059	109560092	(80654463)	+	(GCTCTC)n	Simple_repeat	1	36	(0)	2945187
16	0.0	0.0	0.0	chr4	109560093	109560110	(80654445)	+	(T)n	Simple_repeat	1	18	(0)	2945188
12497	12.0	5.4	10.1	chr4	109703879	109704720	(80509835)	+	Tigger1	DNA/TcMar-Tigger	121	969	(1449)	2945397
91	4.9	0.0	1.8	chr4	109919282	109919390	(80295165)	+	(TC)n	Simple_repeat	1	109	(0)	2945705
1544	21.1	3.5	4.0	chr4	110515698	110516073	(79698482)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	2946740
44	8.1	3.0	0.0	chr4	112144772	112144838	(78069717)	+	(TC)n	Simple_repeat	1	69	(0)	2948771
1556	12.4	6.0	0.0	chr4	112144839	112145072	(78069483)	C	AluJb	SINE/Alu	(30)	282	34	2948772
4854	19.7	7.3	1.7	chr4	112199792	112200087	(78014468)	+	L1MC3	LINE/L1	6532	6870	(915)	2948846
29	6.1	0.0	0.0	chr4	112200088	112200121	(78014434)	+	(TC)n	Simple_repeat	1	34	(0)	2948847
48	0.0	0.0	0.0	chr4	112200124	112200164	(78014391)	+	(AC)n	Simple_repeat	1	41	(0)	2948848
4854	19.7	7.3	1.7	chr4	112200165	112201006	(78013549)	+	L1MC3	LINE/L1	6873	7742	(43)	2948846
340	11.4	0.0	0.0	chr4	118591591	118591662	(71622893)	C	AluSc	SINE/Alu	(0)	309	236	2957168
295	28.0	2.4	5.6	chr4	118890568	118890697	(71323858)	+	MIR3	SINE/MIR	3	129	(139)	2957662
43	0.0	0.0	0.0	chr4	118890698	118890734	(71323821)	+	(TC)n	Simple_repeat	1	37	(0)	2957663
20	0.0	0.0	0.0	chr4	118890735	118890756	(71323799)	+	(GT)n	Simple_repeat	1	22	(0)	2957664
31	5.8	0.0	0.0	chr4	118905431	118905466	(71309089)	+	(TG)n	Simple_repeat	1	36	(0)	2957691
75	8.5	1.7	1.7	chr4	121380133	121380248	(68834307)	+	(GA)n	Simple_repeat	1	118	(0)	2961003
12949	12.9	5.1	1.9	chr4	121664036	121665565	(68548990)	C	Tigger1	DNA/TcMar-Tigger	(842)	1576	23	2961377
2299	13.2	1.6	9.3	chr4	121699866	121700174	(68514381)	C	MER65A	LTR/ERV1	(0)	445	165	2961417
44	0.0	0.0	0.0	chr4	121700175	121700212	(68514343)	+	(TG)n	Simple_repeat	1	38	(0)	2961418
2299	13.2	1.6	9.3	chr4	121700213	121700385	(68514170)	C	MER65A	LTR/ERV1	(281)	164	1	2961417
56	4.5	2.9	0.0	chr4	121977626	121977693	(68236862)	+	(TC)n	Simple_repeat	1	70	(0)	2961896
30	8.1	0.0	0.0	chr4	122706177	122706215	(67508340)	+	(TC)n	Simple_repeat	1	39	(0)	2962879
189	21.5	14.1	4.8	chr4	122706302	122706384	(67508171)	+	L3	LINE/CR1	2565	2656	(1443)	2962880
4252	17.1	5.9	3.2	chr4	122775712	122776580	(67437975)	C	MER54A	LTR/ERVL	(7)	894	1	2963003
15	2.9	14.3	0.0	chr4	126732187	126732221	(63482334)	+	(TATATAA)n	Simple_repeat	1	40	(0)	2968194
24	11.3	0.0	2.5	chr4	127441535	127441574	(62772981)	+	(TC)n	Simple_repeat	1	40	(0)	2969069
34	3.0	0.0	0.0	chr4	127441577	127441610	(62772945)	+	(CA)n	Simple_repeat	1	34	(0)	2969070
1576	15.6	6.4	3.0	chr4	127441633	127441935	(62772620)	+	MLT2B4	LTR/ERVL	1	314	(242)	2969071
2164	13.9	0.0	0.7	chr4	127547996	127548304	(62666251)	+	AluSx1	SINE/Alu	1	307	(5)	2969202
88	1.3	0.0	0.0	chr4	127548310	127548388	(62666167)	+	(AG)n	Simple_repeat	1	79	(0)	2969203
42	3.3	3.0	2.9	chr4	127548389	127548454	(62666101)	+	(AAGA)n	Simple_repeat	1	68	(0)	2969204
2193	17.2	4.5	1.7	chr4	128166471	128166930	(62047625)	C	L1MA9	LINE/L1	(43)	6269	5794	2970308
48	0.0	0.0	0.0	chr4	128166931	128166971	(62047584)	+	(TC)n	Simple_repeat	1	41	(0)	2970309
2193	17.2	4.5	1.7	chr4	128166972	128166984	(62047571)	C	L1MA9	LINE/L1	(519)	5793	5782	2970308
29	34.7	0.0	0.0	chr4	128166985	128167077	(62047478)	+	(AC)n	Simple_repeat	1	93	(0)	2970310
989	21.3	0.4	8.4	chr4	128167078	128167339	(62047216)	C	L1MA9	LINE/L1	(530)	5782	5542	2970308
67	1.6	1.5	0.0	chr4	128302736	128302800	(61911755)	+	(AG)n	Simple_repeat	1	66	(0)	2970525
499	31.2	5.3	0.6	chr4	128302917	128303129	(61911426)	C	MIRc	SINE/MIR	(27)	241	14	2970526
28	0.0	0.0	0.0	chr4	128313284	128313314	(61901241)	+	(GT)n	Simple_repeat	1	31	(0)	2970551
33	5.1	0.0	0.0	chr4	128313314	128313354	(61901201)	+	(GA)n	Simple_repeat	1	41	(0)	2970552
376	27.8	10.2	2.2	chr4	128569105	128569284	(61645271)	C	MIRc	SINE/MIR	(62)	206	11	2970910
41	7.1	1.6	1.6	chr4	128569373	128569433	(61645122)	+	(TC)n	Simple_repeat	1	62	(0)	2970911
44	0.0	0.0	0.0	chr4	128569434	128569471	(61645084)	+	(CA)n	Simple_repeat	1	38	(0)	2970912
3408	15.9	3.3	7.2	chr4	137967380	137968099	(52246456)	C	LTR8	LTR/ERV1	(0)	691	1	2982317
1652	31.5	5.0	7.4	chr4	137968100	137968367	(52246188)	+	ERV3-16A3_I-int	LTR/ERVL	1814	2071	(3155)	2982315
7786	17.5	4.8	5.8	chr4	137987836	137988190	(52226365)	+	L1MA5A	LINE/L1	4238	4800	(1346)	2982340
38	2.8	0.0	0.0	chr4	137988191	137988227	(52226328)	+	(AG)n	Simple_repeat	1	37	(0)	2982342
7132	17.3	10.2	3.7	chr4	137988228	137989663	(52224892)	+	L1MA5A	LINE/L1	4801	6297	(0)	2982340
63	6.9	0.0	0.0	chr4	138177410	138177485	(52037070)	+	(TC)n	Simple_repeat	1	76	(0)	2982559
452	35.4	3.0	4.6	chr4	138177508	138177747	(52036808)	+	MIRb	SINE/MIR	15	250	(18)	2982560
232	29.4	1.9	0.0	chr4	138206143	138206193	(52008362)	+	Plat_L3	LINE/CR1	3533	3584	(2)	2982589
38	11.0	0.0	0.0	chr4	138206221	138206280	(52008275)	+	(TCTC)n	Simple_repeat	1	60	(0)	2982590
19	21.5	0.0	2.2	chr4	138206379	138206423	(52008132)	+	(AT)n	Simple_repeat	1	45	(0)	2982591
12	13.9	0.0	0.0	chr4	138213504	138213527	(52001028)	+	(GTGT)n	Simple_repeat	1	24	(0)	2982597
29	3.1	3.0	0.0	chr4	138213529	138213561	(52000994)	+	(TC)n	Simple_repeat	1	34	(0)	2982598
295	34.5	10.9	5.9	chr4	138213592	138213858	(52000697)	+	L2c	LINE/L2	3084	3386	(1)	2982599
887	18.0	0.0	0.0	chr4	138299536	138299685	(51914870)	C	AluJr	SINE/Alu	(1)	311	162	2982723
74	0.0	0.0	0.0	chr4	138299711	138299773	(51914782)	+	(AG)n	Simple_repeat	1	63	(0)	2982724
1856	16.2	12.2	1.1	chr4	138307334	138307713	(51906842)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2982741
1979	12.2	7.3	1.4	chr4	138402362	138402530	(51812025)	C	THE1D	LTR/ERVL-MaLR	(0)	381	212	2982856
48	0.0	0.0	0.0	chr4	138402531	138402571	(51811984)	+	(GA)n	Simple_repeat	1	41	(0)	2982857
1979	12.2	7.3	1.4	chr4	138402572	138402759	(51811796)	C	THE1D	LTR/ERVL-MaLR	(170)	211	1	2982856
59	0.0	0.0	0.0	chr4	138451998	138452047	(51762508)	+	(TC)n	Simple_repeat	1	50	(0)	2982929
20	8.0	0.0	0.0	chr4	138673926	138673952	(51540603)	+	(GA)n	Simple_repeat	1	27	(0)	2983188
263	28.6	6.3	5.7	chr4	138673961	138674101	(51540454)	+	MIRb	SINE/MIR	20	161	(107)	2983189
1578	19.2	2.4	8.5	chr4	138946302	138946700	(51267855)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	2983603
32	22.3	0.0	1.2	chr4	139084411	139084490	(51130065)	+	(CGGCGG)n	Simple_repeat	1	80	(0)	2983898
2262	19.5	3.8	8.3	chr4	139207782	139208129	(51006426)	C	MLT2B3	LTR/ERVL	(0)	554	227	2984168
29	0.0	0.0	0.0	chr4	139208130	139208154	(51006401)	+	(GA)n	Simple_repeat	1	25	(0)	2984169
2262	19.5	3.8	8.3	chr4	139208155	139208386	(51006169)	C	MLT2B3	LTR/ERVL	(328)	226	1	2984168
1783	18.8	16.3	0.5	chr4	139610394	139610816	(50603739)	+	MLT1D	LTR/ERVL-MaLR	1	503	(2)	2984960
1216	19.0	1.3	3.5	chr4	139610817	139610977	(50603578)	C	MER58A	DNA/hAT-Charlie	(68)	156	1	2984959
17	4.5	0.0	4.0	chr4	139611013	139611030	(50603525)	+	(TC)n	Simple_repeat	1	18	(0)	2984961
2014	15.5	0.3	0.0	chr4	139611031	139611327	(50603228)	C	AluJb	SINE/Alu	(13)	299	2	2984962
27	8.8	0.0	0.0	chr4	139666098	139666134	(50548421)	+	(GT)n	Simple_repeat	1	37	(0)	2985077
4783	10.1	1.9	0.1	chr4	139667873	139668549	(50546006)	C	MER4D1	LTR/ERV1	(0)	900	212	2985080
268	11.1	1.8	3.6	chr4	139668554	139668609	(50545946)	C	LTR46	LTR/ERV1	(0)	460	406	2985081
1960	13.2	8.9	6.7	chr4	139668643	139669048	(50545507)	C	LTR46	LTR/ERV1	(44)	416	1	2985081
7050	19.6	4.1	1.2	chr4	143023920	143025344	(47189211)	+	L1M1	LINE/L1	12	1789	(5776)	2989692
440	12.2	5.1	0.0	chr4	143025345	143025418	(47189137)	C	MADE1	DNA/TcMar-Mariner	(2)	78	1	2989693
5112	21.3	3.9	5.4	chr4	143025419	143025695	(47188860)	+	L1M1	LINE/L1	1790	2096	(5469)	2989692
232	28.4	1.1	1.1	chr4	143378466	143378554	(46836001)	C	Tigger16a	DNA/TcMar-Tigger	(444)	513	425	2990239
51	0.0	0.0	0.0	chr4	143378630	143378673	(46835882)	+	(TC)n	Simple_repeat	1	44	(0)	2990242
11	3.1	14.3	2.5	chr4	143378775	143378809	(46835746)	+	(GCCTCTG)n	Simple_repeat	1	40	(0)	2990243
1777	18.8	5.9	2.6	chr4	143721961	143722151	(46492404)	C	MSTD	LTR/ERVL-MaLR	(0)	396	210	2990658
40	2.6	0.0	0.0	chr4	143722152	143722190	(46492365)	+	(AG)n	Simple_repeat	1	39	(0)	2990659
1907	18.8	5.9	2.6	chr4	143722191	143722376	(46492179)	C	MSTD	LTR/ERVL-MaLR	(187)	209	6	2990658
5066	23.6	9.8	5.3	chr4	145611300	145611818	(44602737)	+	MSTD-int	LTR/ERVL-MaLR	2	514	(1221)	2993161
41	2.6	0.0	0.0	chr4	145611819	145611858	(44602697)	+	(AG)n	Simple_repeat	1	40	(0)	2993162
5066	23.6	9.8	5.3	chr4	145611859	145611956	(44602599)	+	MSTD-int	LTR/ERVL-MaLR	515	589	(1146)	2993161
3128	17.7	4.8	1.4	chr4	145611957	145612604	(44601951)	C	LTR51	LTR/ERV1	(0)	671	1	2993163
233	25.6	8.2	0.0	chr4	147453814	147453891	(42760664)	+	HAL1ME	LINE/L1	482	566	(1899)	2995615
30	0.0	0.0	0.0	chr4	147453902	147453927	(42760628)	+	(CA)n	Simple_repeat	1	26	(0)	2995616
36	11.1	0.0	3.2	chr4	147453929	147453990	(42760565)	+	(TC)n	Simple_repeat	1	62	(0)	2995617
33	0.0	0.0	0.0	chr4	147453999	147454026	(42760529)	+	(CA)n	Simple_repeat	1	28	(0)	2995618
2418	30.1	14.6	3.2	chr4	147455377	147455786	(42758769)	+	L2a	LINE/L2	1334	1740	(1679)	2995624
33	0.0	3.1	0.0	chr4	147455787	147455818	(42758737)	+	(TC)n	Simple_repeat	1	33	(0)	2995625
2418	30.1	14.6	3.2	chr4	147455819	147456784	(42757771)	+	L2a	LINE/L2	1741	2892	(527)	2995624
950	23.5	12.4	1.2	chr4	147649078	147649405	(42565150)	C	MSTD	LTR/ERVL-MaLR	(25)	371	2	2995950
1979	14.6	0.0	1.4	chr4	147709295	147709574	(42504981)	+	AluSz6	SINE/Alu	1	276	(36)	2996085
61	8.8	0.0	0.0	chr4	147709575	147709661	(42504894)	+	(GAGA)n	Simple_repeat	1	87	(0)	2996086
1230	10.5	4.7	0.6	chr4	147709662	147709843	(42504712)	+	MER41B	LTR/ERV1	445	634	(0)	2996084
1062	24.8	10.4	0.3	chr4	148059689	148059983	(42154572)	C	LTR40a	LTR/ERVL	(0)	519	192	2996655
39	5.1	4.6	2.9	chr4	148059984	148060048	(42154507)	+	(GA)n	Simple_repeat	1	68	(0)	2996656
269	15.2	0.0	2.1	chr4	148060052	148060098	(42154457)	C	MER105	DNA	(157)	46	1	2996654
2339	22.3	1.2	3.4	chr4	150210980	150211509	(40003046)	C	MLT1F	LTR/ERVL-MaLR	(30)	518	1	2999470
1149	20.8	9.9	8.9	chr4	150387965	150388334	(39826221)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	2999690
16	13.2	0.0	0.0	chr4	150952624	150952648	(39261907)	+	(TC)n	Simple_repeat	1	25	(0)	3000502
1868	14.7	1.4	0.7	chr4	151105702	151105994	(39108561)	C	AluSz6	SINE/Alu	(17)	295	1	3000870
1393	18.2	3.2	4.5	chr4	151105995	151106132	(39108423)	C	AluJr	SINE/Alu	(174)	138	1	3000869
14	17.2	5.1	0.0	chr4	152528154	152528192	(37686363)	+	(ACAG)n	Simple_repeat	1	41	(0)	3003129
27	6.1	0.0	0.0	chr4	152535997	152536031	(37678524)	+	(CAGCGG)n	Simple_repeat	1	35	(0)	3003140
403	32.2	1.6	3.2	chr4	152609950	152610135	(37604420)	+	MER5A	DNA/hAT-Charlie	7	189	(0)	3003285
70	1.6	0.0	0.0	chr4	152661279	152661342	(37553213)	+	(TC)n	Simple_repeat	1	64	(0)	3003368
310	24.0	21.4	0.0	chr4	152661390	152661510	(37553045)	C	MIRb	SINE/MIR	(15)	253	100	3003369
255	27.5	11.4	9.0	chr4	152990870	152991057	(37223498)	+	MIRc	SINE/MIR	32	224	(44)	3003845
747	25.6	3.3	4.5	chr4	153487411	153487682	(36726873)	+	LTR88b	LTR/Gypsy?	8	276	(586)	3004761
31	0.0	0.0	0.0	chr4	153487694	153487720	(36726835)	+	(GT)n	Simple_repeat	1	27	(0)	3004762
17	0.0	0.0	0.0	chr4	153487721	153487739	(36726816)	+	(AG)n	Simple_repeat	1	19	(0)	3004763
15	13.7	0.0	0.0	chr4	153487765	153487788	(36726767)	+	(TG)n	Simple_repeat	1	24	(0)	3004764
17	16.4	0.0	0.0	chr4	153487855	153487888	(36726667)	+	GA-rich	Low_complexity	1	34	(0)	3004765
15	22.4	0.0	2.6	chr4	153930282	153930319	(36284236)	+	(TC)n	Simple_repeat	1	38	(0)	3005368
14511	12.8	3.2	1.7	chr4	154342021	154344363	(35870192)	C	Tigger1	DNA/TcMar-Tigger	(13)	2405	27	3005891
324	33.0	6.1	0.0	chr4	154456115	154456299	(35758256)	C	Tigger15a	DNA/TcMar-Tigger	(312)	403	207	3006065
596	36.1	4.8	5.3	chr4	154456300	154456697	(35757858)	C	L2c	LINE/L2	(3)	3384	2989	3006066
448	30.6	5.3	0.9	chr4	154459511	154459728	(35754827)	+	LTR33A_	LTR/ERVL	1	228	(303)	3006070
60	7.1	0.0	0.0	chr4	154459735	154459808	(35754747)	+	(TC)n	Simple_repeat	1	74	(0)	3006071
52	5.7	4.1	0.0	chr4	154463684	154463756	(35750799)	+	(TC)n	Simple_repeat	1	76	(0)	3006076
341	37.5	2.1	3.7	chr4	158807966	158808156	(31406399)	+	MIR3	SINE/MIR	6	193	(15)	3011941
52	2.1	0.0	0.0	chr4	158834289	158834337	(31380218)	+	(TC)n	Simple_repeat	1	49	(0)	3011986
5730	15.6	4.0	9.7	chr4	158929318	158930191	(31284364)	C	L1MB7	LINE/L1	(4900)	2617	1789	3012099
30	0.0	0.0	0.0	chr4	158930192	158930217	(31284338)	+	(TC)n	Simple_repeat	1	26	(0)	3012108
5730	15.6	4.0	9.7	chr4	158930218	158930231	(31284324)	C	L1MB7	LINE/L1	(5729)	1788	1788	3012099
1653	16.7	1.9	0.4	chr4	158930232	158930494	(31284061)	C	AluJb	SINE/Alu	(32)	280	14	3012109
50	0.0	0.0	0.0	chr4	159037786	159037828	(31176727)	+	(AC)n	Simple_repeat	1	43	(0)	3012275
2696	23.4	10.0	2.7	chr4	159037829	159037965	(31176590)	C	L1MC5	LINE/L1	(1987)	7317	7172	3012273
37	2.9	0.0	0.0	chr4	159037966	159038001	(31176554)	+	(TC)n	Simple_repeat	1	36	(0)	3012276
2696	23.4	10.0	2.7	chr4	159038002	159038461	(31176094)	C	L1MC5	LINE/L1	(2133)	7171	6686	3012273
1747	16.8	2.9	1.5	chr4	159062680	159062697	(31151858)	C	AluJb	SINE/Alu	(21)	291	274	3012323
31	0.0	0.0	0.0	chr4	159062698	159062724	(31151831)	+	(TC)n	Simple_repeat	1	27	(0)	3012324
1747	16.8	2.9	1.5	chr4	159062725	159062979	(31151576)	C	AluJb	SINE/Alu	(48)	264	14	3012323
1837	14.0	5.9	0.0	chr4	159130708	159130992	(31083563)	C	AluJb	SINE/Alu	(9)	303	1	3012464
15	4.3	8.3	0.0	chr4	159131074	159131097	(31083458)	+	(GT)n	Simple_repeat	1	26	(0)	3012465
40	0.0	0.0	0.0	chr4	159131098	159131131	(31083424)	+	(GA)n	Simple_repeat	1	34	(0)	3012466
2257	9.7	0.4	0.0	chr4	159131132	159131409	(31083146)	C	AluSp	SINE/Alu	(34)	279	1	3012467
59	0.0	0.0	0.0	chr4	163244196	163244245	(26970310)	+	(GA)n	Simple_repeat	1	50	(0)	3017770
51	0.0	0.0	0.0	chr4	165144608	165144651	(25069904)	+	(GA)n	Simple_repeat	1	44	(0)	3020625
1559	19.7	0.3	14.5	chr4	168475693	168476126	(21738429)	+	MLT1A	LTR/ERVL-MaLR	1	372	(2)	3024862
601	28.2	8.6	6.2	chr4	168476127	168476157	(21738398)	+	HAL1ME	LINE/L1	2249	2274	(191)	3024860
2417	8.2	0.0	0.3	chr4	168520046	168520348	(21694207)	+	AluY	SINE/Alu	2	303	(8)	3024929
868	10.7	0.8	0.8	chr4	169079649	169079770	(21134785)	+	AluJo	SINE/Alu	2	123	(189)	3025779
1538	16.4	0.0	5.9	chr4	173030730	173031015	(17183540)	+	AluJb	SINE/Alu	26	294	(18)	3031042
510	24.6	9.1	11.5	chr4	173031019	173031275	(17183280)	+	MIR	SINE/MIR	6	254	(8)	3031043
373	22.0	13.2	10.4	chr4	173135040	173135298	(17079257)	C	MIR	SINE/MIR	(0)	262	7	3031173
23	7.0	0.0	0.0	chr4	173135384	173135413	(17079142)	+	(TC)n	Simple_repeat	1	30	(0)	3031174
1892	15.7	0.7	0.4	chr4	173135416	173135696	(17078859)	C	AluJr	SINE/Alu	(30)	282	1	3031175
32	3.2	0.0	0.0	chr4	174387244	174387275	(15827280)	+	(GA)n	Simple_repeat	1	32	(0)	3032884
11	17.0	2.1	6.2	chr4	174387276	174387314	(15827241)	+	A-rich	Low_complexity	9	44	(0)	3032885
46	2.3	0.0	0.0	chr4	174639367	174639410	(15575145)	+	(TG)n	Simple_repeat	1	44	(0)	3033241
18	11.2	3.3	0.0	chr4	174639413	174639442	(15575113)	+	(AG)n	Simple_repeat	1	31	(0)	3033242
22	23.4	1.0	7.1	chr4	176320228	176320324	(13894231)	+	(GGCCGG)n	Simple_repeat	1	98	(0)	3035383
2425	20.5	2.2	5.6	chr4	182975586	182976154	(7238401)	C	MER44B	DNA/TcMar-Tigger	(1)	549	1	3044185
41	0.0	0.0	0.0	chr4	183155190	183155224	(7059331)	+	(GA)n	Simple_repeat	1	35	(0)	3044493
2944	25.6	8.4	2.4	chr4	183348376	183348835	(6865720)	+	Arthur1	DNA/hAT-Tip100	1	507	(3440)	3044782
4144	13.2	2.0	0.0	chr4	183348836	183349456	(6865099)	+	MER41B	LTR/ERV1	1	634	(0)	3044783
1388	25.4	3.5	6.3	chr4	184044293	184044422	(6170133)	C	L1MC4	LINE/L1	(11)	8031	7777	3045962
36	10.0	1.5	1.5	chr4	184044423	184044488	(6170067)	+	(TC)n	Simple_repeat	1	67	(0)	3045963
1388	28.6	6.4	5.4	chr4	184044489	184044812	(6169743)	C	L1MC4	LINE/L1	(116)	7926	7590	3045962
228	23.8	0.0	6.0	chr4	184229905	184229971	(5984584)	+	L1MEh	LINE/L1	1527	1589	(646)	3046221
24	6.5	0.0	0.0	chr4	184229976	184230007	(5984548)	+	(CT)n	Simple_repeat	1	32	(0)	3046222
41	2.6	0.0	0.0	chr4	184230008	184230047	(5984508)	+	(CA)n	Simple_repeat	1	40	(0)	3046223
4613	10.7	0.0	4.3	chr4	184339405	184339941	(5874614)	C	MER41B	LTR/ERV1	(107)	527	1	3046401
2789	23.4	2.0	7.8	chr4	184339944	184339990	(5874565)	+	L1ME1	LINE/L1	5591	5628	(724)	3046398
2293	8.9	2.9	0.7	chr4	184339991	184340294	(5874261)	C	AluY	SINE/Alu	(0)	311	1	3046403
236	27.4	3.2	1.0	chr4	184815452	184815544	(5399011)	C	L2c	LINE/L2	(20)	3355	3258	3047203
30	3.5	0.0	0.0	chr4	184979839	184979868	(5234687)	+	(GA)n	Simple_repeat	1	30	(0)	3047481
259	35.9	1.7	0.0	chr4	184979872	184979988	(5234567)	+	L2b	LINE/L2	3251	3369	(6)	3047482
59	0.0	0.0	0.0	chr4	185023030	185023079	(5191476)	+	(TC)n	Simple_repeat	1	50	(0)	3047549
18	10.8	3.3	0.0	chr4	185023089	185023118	(5191437)	+	(TG)n	Simple_repeat	1	31	(0)	3047550
1875	21.1	5.6	3.5	chr4	185120045	185120495	(5094060)	+	MER65C	LTR/ERV1	1	461	(0)	3047714
12	26.6	0.0	0.0	chr4	185120527	185120563	(5093992)	+	A-rich	Low_complexity	1	37	(0)	3047715
421	10.7	0.0	0.0	chr4	185213939	185213994	(5000561)	C	AluJo	SINE/Alu	(17)	295	240	3047905
817	11.9	11.7	0.0	chr4	185214005	185214155	(5000400)	+	LTR36	LTR/ERV1	1	171	(440)	3047906
386	35.6	2.0	0.0	chr4	186136843	186136936	(4077619)	+	MIR	SINE/MIR	107	203	(59)	3049256
87	2.5	0.0	0.0	chr4	186136937	186137019	(4077536)	+	(TC)n	Simple_repeat	1	83	(0)	3049257
386	35.6	2.0	0.0	chr4	186137020	186137070	(4077485)	+	MIR	SINE/MIR	204	254	(8)	3049256
1666	27.4	5.5	1.2	chr4	187216384	187216826	(2997729)	+	L1MC4	LINE/L1	7198	7638	(404)	3050725
1911	14.1	7.1	0.3	chr4	187216827	187217181	(2997374)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3050726
42	10.4	0.0	0.0	chr4	188411558	188411621	(1802934)	+	(GAGA)n	Simple_repeat	1	64	(0)	3052563
68	26.1	1.5	1.5	chr4	190016059	190016255	(198300)	+	(CT)n	Simple_repeat	1	200	(0)	3054515
3078	8.0	0.5	0.0	chr4	190016260	190016658	(197897)	C	LTR2	LTR/ERV1	(0)	463	63	3054516
1536	15.4	18.2	0.3	chr5	935618	935968	(180602291)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3055807
2487	23.1	8.7	2.1	chr5	996795	997467	(180540792)	+	MER72	LTR/ERV1	1	722	(0)	3055886
736	22.4	0.2	0.2	chr5	1198319	1199900	(180338359)	+	(CTCTCT)n	Simple_repeat	1	1585	(0)	3056039
2115	13.5	11.7	0.5	chr5	5128826	5129205	(176409054)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3060199
3087	15.2	1.6	0.2	chr5	5585866	5586354	(175951905)	C	MER66C	LTR/ERV1	(59)	496	1	3060714
3295	19.3	5.7	1.8	chr5	5593495	5594874	(175943385)	+	L1MB3	LINE/L1	4738	6208	(95)	3060722
2162	14.2	11.4	0.5	chr5	6195244	6195624	(175342635)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3061507
1496	19.4	0.8	9.0	chr5	6195625	6195982	(175342277)	C	MER41C	LTR/ERV1	(218)	416	1	3061506
36	0.0	0.0	0.0	chr5	6435287	6435317	(175102942)	+	(TC)n	Simple_repeat	1	31	(0)	3061858
315	33.3	4.4	0.0	chr5	6435633	6435740	(175102519)	C	HAL1ME	LINE/L1	(2239)	226	114	3061859
53	9.0	0.0	3.4	chr5	6531432	6531520	(175006739)	+	(TCTCCT)n	Simple_repeat	1	89	(0)	3061972
61	0.0	0.0	0.0	chr5	6531521	6531572	(175006687)	+	(CT)n	Simple_repeat	1	52	(0)	3061973
40	0.0	0.0	0.0	chr5	7957531	7957564	(173580695)	+	(TG)n	Simple_repeat	1	34	(0)	3063773
25	9.2	0.0	0.0	chr5	7957567	7957601	(173580658)	+	(AG)n	Simple_repeat	1	35	(0)	3063774
286	26.4	12.9	4.5	chr5	10265628	10265782	(171272477)	C	MIR	SINE/MIR	(87)	175	6	3066578
2253	11.3	5.0	5.0	chr5	10311664	10311761	(171226498)	C	THE1B	LTR/ERVL-MaLR	(258)	106	1	3066668
868	25.2	7.5	3.5	chr5	10311762	10312185	(171226074)	+	MLT1F1	LTR/ERVL-MaLR	125	569	(0)	3066667
2079	11.8	10.8	3.0	chr5	10320734	10321085	(171217174)	C	MSTA	LTR/ERVL-MaLR	(33)	395	1	3066692
662	22.2	6.4	5.7	chr5	10321086	10321336	(171216923)	C	MLT1C	LTR/ERVL-MaLR	(143)	324	39	3066691
1289	21.8	10.5	1.8	chr5	10439144	10439596	(171098663)	+	L1MD	LINE/L1	4802	5298	(848)	3066891
531	27.8	17.3	4.6	chr5	10439622	10440233	(171098026)	+	L2a	LINE/L2	2730	3424	(2)	3066892
1313	18.7	6.2	4.9	chr5	10508470	10508681	(171029578)	C	L1MC4a	LINE/L1	(207)	7675	7442	3067022
73	0.0	0.0	0.0	chr5	10508736	10508797	(171029462)	+	(AC)n	Simple_repeat	1	62	(0)	3067025
41	6.0	0.0	0.0	chr5	10508798	10508849	(171029410)	+	(TC)n	Simple_repeat	1	52	(0)	3067026
1567	13.9	0.7	11.2	chr5	10544979	10545281	(170992978)	+	AluSx	SINE/Alu	1	271	(41)	3067106
85	3.6	0.0	0.0	chr5	10545282	10545367	(170992892)	+	(CT)n	Simple_repeat	1	86	(0)	3067107
23	10.8	0.0	4.4	chr5	10559825	10559869	(170978390)	+	(TCTT)n	Simple_repeat	1	45	(0)	3067134
276	11.1	1.8	0.6	chr5	10559870	10559923	(170978336)	C	FLAM_C	SINE/Alu	(96)	37	1	3067135
36	0.0	0.0	0.0	chr5	10761386	10761418	(170776841)	+	(CGGGGG)n	Simple_repeat	1	33	(0)	3067423
13	18.9	3.5	6.8	chr5	10761419	10761475	(170776784)	+	GA-rich	Low_complexity	1	59	(0)	3067424
999	21.2	0.0	0.5	chr5	10770317	10770520	(170767739)	+	MLT2D	LTR/ERVL	1	203	(211)	3067441
286	16.9	1.1	1.5	chr5	10770527	10770617	(170767642)	+	MLT2D	LTR/ERVL	441	540	(19)	3067442
46	0.0	0.0	0.0	chr5	10770618	10770656	(170767603)	+	(CA)n	Simple_repeat	1	39	(0)	3067443
283	7.9	0.0	0.0	chr5	10770657	10770694	(170767565)	+	MLT2D	LTR/ERVL	524	561	(2)	3067442
36	0.0	0.0	0.0	chr5	16492200	16492230	(165046029)	+	(CT)n	Simple_repeat	1	31	(0)	3075074
20	0.0	0.0	0.0	chr5	16492231	16492252	(165046007)	+	(AC)n	Simple_repeat	1	22	(0)	3075075
66	3.5	5.8	0.0	chr5	17275941	17276027	(164262232)	+	(TC)n	Simple_repeat	1	92	(0)	3076536
5886	5.8	1.3	1.4	chr5	18800049	18800829	(162737430)	+	LTR17	LTR/ERV1	1	780	(0)	3078522
2632	11.3	8.1	2.0	chr5	18800830	18800955	(162737304)	+	LTR21A	LTR/ERV1	302	455	(26)	3078521
48	4.1	0.0	0.0	chr5	18800956	18801005	(162737254)	+	(TC)n	Simple_repeat	1	50	(0)	3078523
2632	11.3	8.1	2.0	chr5	18801006	18801030	(162737229)	+	LTR21A	LTR/ERV1	456	480	(1)	3078521
1801	30.1	4.7	2.0	chr5	18801033	18801311	(162736948)	C	L1MEc	LINE/L1	(5632)	768	488	3078518
635	20.6	6.2	0.0	chr5	22308650	22308785	(159229474)	C	MLT1D	LTR/ERVL-MaLR	(360)	145	1	3083256
42	4.0	0.0	0.0	chr5	22308804	22308854	(159229405)	+	(AC)n	Simple_repeat	1	51	(0)	3083257
101	3.0	4.4	0.0	chr5	22308854	22308988	(159229271)	+	(AG)n	Simple_repeat	1	141	(0)	3083258
34	3.0	0.0	0.0	chr5	27187055	27187088	(154351171)	+	(GA)n	Simple_repeat	1	34	(0)	3089549
34	10.5	1.4	5.7	chr5	29983907	29983975	(151554284)	+	(TC)n	Simple_repeat	1	70	(0)	3093094
22	10.1	0.0	0.0	chr5	29983975	29984006	(151554253)	+	(CA)n	Simple_repeat	1	32	(0)	3093095
15	20.0	1.9	7.4	chr5	32444368	32444420	(149093839)	+	GA-rich	Low_complexity	1	54	(0)	3096862
2037	13.1	12.7	0.8	chr5	32564176	32564489	(148973770)	+	MLT2D	LTR/ERVL	3	368	(46)	3097122
87	2.5	0.0	0.0	chr5	32564490	32564572	(148973687)	+	(CA)n	Simple_repeat	1	83	(0)	3097123
2037	13.1	12.7	0.8	chr5	32564573	32564618	(148973641)	+	MLT2D	LTR/ERVL	369	411	(3)	3097122
311	28.9	10.0	5.6	chr5	33443141	33443300	(148094959)	+	MIRb	SINE/MIR	16	172	(36)	3098357
59	1.9	0.0	0.0	chr5	33443307	33443361	(148094898)	+	(CT)n	Simple_repeat	1	55	(0)	3098358
17	9.1	0.0	0.0	chr5	33984865	33984888	(147553371)	+	(TC)n	Simple_repeat	1	24	(0)	3099177
457	32.3	6.1	2.5	chr5	34048022	34048259	(147490000)	C	MamRep605	LTR?	(146)	703	457	3099277
20	4.2	0.0	0.0	chr5	34048262	34048286	(147489973)	+	(GT)n	Simple_repeat	1	25	(0)	3099278
35	0.0	0.0	0.0	chr5	34048290	34048319	(147489940)	+	(GA)n	Simple_repeat	1	30	(0)	3099279
394	19.2	2.3	1.1	chr5	34048362	34048485	(147489774)	C	LTR50	LTR/ERVL	(0)	795	717	3099280
516	24.7	27.4	2.4	chr5	34048457	34048864	(147489395)	C	LTR50	LTR/ERVL	(184)	611	2	3099280
57	1.8	1.8	0.0	chr5	36067814	36067870	(145470389)	+	(GA)n	Simple_repeat	1	58	(0)	3102247
2344	10.1	0.0	0.3	chr5	36068014	36068309	(145469950)	C	AluSx1	SINE/Alu	(16)	296	2	3102248
412	28.1	12.2	1.8	chr5	36111769	36111946	(145426313)	C	MIRb	SINE/MIR	(7)	255	48	3102302
24	16.9	5.6	0.0	chr5	36112018	36112071	(145426188)	+	GA-rich	Low_complexity	1	57	(0)	3102303
324	27.5	7.0	4.2	chr5	36112151	36112317	(145425942)	C	Charlie16a	DNA/hAT-Charlie	(166)	176	5	3102304
446	28.8	0.8	0.8	chr5	36744029	36744161	(144794098)	+	MIR	SINE/MIR	2	134	(128)	3103276
18	27.2	4.9	1.2	chr5	36876605	36876685	(144661574)	+	(CGG)n	Simple_repeat	1	85	(0)	3103485
14	13.2	2.9	2.8	chr5	36876818	36876852	(144661407)	+	(CTCC)n	Simple_repeat	1	36	(0)	3103486
47	0.0	0.0	0.0	chr5	37171746	37171785	(144366474)	+	(CT)n	Simple_repeat	1	40	(0)	3103933
1601	16.2	0.0	8.4	chr5	37171806	37172101	(144366158)	C	AluJr4	SINE/Alu	(31)	281	11	3103934
36	2.9	0.0	0.0	chr5	37495443	37495477	(144042782)	+	(TC)n	Simple_repeat	1	35	(0)	3104646
21	4.0	0.0	0.0	chr5	37495478	37495503	(144042756)	+	(GT)n	Simple_repeat	1	26	(0)	3104647
1810	17.9	4.7	5.1	chr5	38045424	38045815	(143492444)	C	MLT1B	LTR/ERVL-MaLR	(0)	560	1	3105471
366	19.5	8.9	3.5	chr5	38045816	38045900	(143492359)	+	MIRb	SINE/MIR	106	195	(73)	3105472
34	6.5	0.0	3.9	chr5	38607486	38607537	(142930722)	+	(CT)n	Simple_repeat	1	52	(0)	3106385
18	4.5	0.0	0.0	chr5	38640258	38640280	(142897979)	+	(GA)n	Simple_repeat	1	23	(0)	3106427
16	0.0	0.0	0.0	chr5	38640280	38640297	(142897962)	+	(GT)n	Simple_repeat	1	18	(0)	3106428
3975	13.1	2.3	2.5	chr5	38660105	38660746	(142877513)	+	LTR9D	LTR/ERV1	5	645	(0)	3106453
1931	15.4	6.0	2.7	chr5	38726780	38727147	(142811112)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3106564
130	2.4	6.4	0.6	chr5	38832047	38832217	(142706042)	+	(CT)n	Simple_repeat	1	182	(0)	3106749
520	9.3	3.9	0.0	chr5	39167048	39167122	(142371137)	+	MADE1	DNA/TcMar-Mariner	3	80	(0)	3107168
193	33.7	11.5	0.0	chr5	39167162	39167253	(142371006)	+	MIRb	SINE/MIR	1	104	(164)	3107169
32	3.2	0.0	0.0	chr5	39167256	39167287	(142370972)	+	(TC)n	Simple_repeat	1	32	(0)	3107170
252	22.1	11.6	1.6	chr5	39167314	39167437	(142370822)	C	L1ME3G	LINE/L1	(12)	912	775	3107171
2211	14.8	2.4	2.7	chr5	39249845	39250220	(142288039)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3107308
1502	22.9	5.4	6.2	chr5	40785654	40785839	(140752420)	+	MLT1C	LTR/ERVL-MaLR	11	203	(264)	3109412
47	0.0	0.0	0.0	chr5	40785840	40785879	(140752380)	+	(AG)n	Simple_repeat	1	40	(0)	3109413
1502	22.9	5.4	6.2	chr5	40785880	40785972	(140752287)	+	MLT1C	LTR/ERVL-MaLR	204	286	(181)	3109412
2366	9.7	0.0	0.0	chr5	40785973	40786270	(140751989)	+	AluSx	SINE/Alu	1	298	(14)	3109414
329	24.6	5.0	1.7	chr5	42728036	42728151	(138810108)	C	MLT1O	LTR/ERVL-MaLR	(0)	542	423	3111986
63	1.8	0.0	0.0	chr5	42728245	42728302	(138809957)	+	(TC)n	Simple_repeat	1	58	(0)	3111987
1797	19.0	7.5	4.8	chr5	42985850	42986264	(138551995)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	3112362
1561	13.0	5.3	0.8	chr5	43043459	43043593	(138494666)	C	AluJo	SINE/Alu	(44)	268	132	3112449
17642	10.2	3.5	1.2	chr5	43072721	43075264	(138462995)	C	HERVH48-int	LTR/ERV1	(4050)	2604	1	3112489
2999	10.3	0.2	0.7	chr5	43075265	43075673	(138462586)	C	MER48	LTR/ERV1	(0)	407	1	3112489
17	21.1	0.0	0.0	chr5	43277745	43277778	(138260481)	+	(TC)n	Simple_repeat	1	34	(0)	3112875
43	0.0	0.0	0.0	chr5	43277780	43277816	(138260443)	+	(GT)n	Simple_repeat	1	37	(0)	3112876
24	0.0	0.0	0.0	chr5	43277817	43277843	(138260416)	+	(AG)n	Simple_repeat	1	27	(0)	3112877
24	36.3	0.7	2.2	chr5	43277943	43278036	(138260223)	+	(TCTT)n	Simple_repeat	1	91	(0)	3112878
1870	15.9	15.0	2.7	chr5	43368555	43368962	(138169297)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	3112973
67	3.1	0.0	0.0	chr5	43369020	43369085	(138169174)	+	(GA)n	Simple_repeat	1	66	(0)	3112974
977	20.8	1.6	0.5	chr5	43369090	43369273	(138168986)	C	MLT1F2	LTR/ERVL-MaLR	(372)	188	3	3112975
21686	12.9	2.1	1.0	chr5	43567742	43570952	(137967307)	+	PRIMA41-int	LTR/ERV1	4499	7756	(0)	3113281
37	2.9	0.0	0.0	chr5	53120498	53120533	(128417726)	+	(TC)n	Simple_repeat	1	36	(0)	3119856
1202	23.3	1.4	10.8	chr5	53162039	53162447	(128375812)	C	MLT1A	LTR/ERVL-MaLR	(4)	370	1	3119911
2358	10.7	5.3	18.3	chr5	53162495	53163019	(128375240)	C	MLT2A2	LTR/ERVL	(0)	453	1	3119912
620	19.6	0.0	0.0	chr5	53543083	53543179	(127995080)	+	FLAM_A	SINE/Alu	20	116	(26)	3120420
360	24.7	9.1	6.6	chr5	53543403	53543584	(127994675)	C	Charlie16a	DNA/hAT-Charlie	(101)	241	55	3120421
1799	16.7	1.2	3.5	chr5	54279283	54279629	(127258630)	C	MLT1A	LTR/ERVL-MaLR	(18)	356	18	3121477
33	0.0	0.0	0.0	chr5	54637987	54638014	(126900245)	+	(GA)n	Simple_repeat	1	28	(0)	3122035
526	32.2	10.2	4.3	chr5	54738284	54738633	(126799626)	C	LTR88a	LTR/Gypsy?	(376)	440	68	3122197
18	17.7	8.5	1.6	chr5	54738689	54738695	(126799564)	+	(CA)n	Simple_repeat	1	60	(0)	3122198
12	22.6	4.2	2.0	chr5	54738696	54738743	(126799516)	+	(ACACC)n	Simple_repeat	1	50	(0)	3122199
694	20.6	2.3	15.9	chr5	55728882	55729049	(125809210)	C	L1MC4	LINE/L1	(924)	8380	8243	3123778
2719	21.4	3.1	1.9	chr5	55729031	55729189	(125809070)	C	L1MC4	LINE/L1	(2)	8040	7906	3123778
35	0.0	0.0	0.0	chr5	55729190	55729219	(125809040)	+	(TC)n	Simple_repeat	1	30	(0)	3123780
2719	20.5	3.3	2.1	chr5	55729220	55729702	(125808557)	C	L1MC4	LINE/L1	(137)	7905	7405	3123778
2491	7.3	0.0	0.0	chr5	56057913	56058212	(125480047)	+	AluY	SINE/Alu	1	300	(11)	3124367
37	0.0	0.0	0.0	chr5	56058300	56058331	(125479928)	+	(GA)n	Simple_repeat	1	32	(0)	3124368
11	22.1	3.9	3.8	chr5	56085730	56085780	(125452479)	+	(TTATTT)n	Simple_repeat	1	53	(0)	3124432
17	18.8	1.9	3.8	chr5	56192114	56192165	(125346094)	+	(CTCT)n	Simple_repeat	1	53	(0)	3124648
1878	22.5	8.6	2.4	chr5	56244403	56244870	(125293389)	+	MLT2B1	LTR/ERVL	1	500	(20)	3124712
47	11.1	3.8	0.0	chr5	56359474	56359552	(125178707)	+	(AG)n	Simple_repeat	1	82	(0)	3124925
22	21.4	3.2	6.2	chr5	56359553	56359564	(125178695)	+	GA-rich	Low_complexity	4	97	(0)	3124926
51	0.0	0.0	0.0	chr5	56546281	56546324	(124991935)	+	(TG)n	Simple_repeat	1	44	(0)	3125213
24	0.0	0.0	0.0	chr5	56546325	56546350	(124991909)	+	(AG)n	Simple_repeat	1	26	(0)	3125214
537	22.2	13.1	6.7	chr5	57042511	57042587	(124495672)	C	MER45A	DNA/hAT-Tip100	(85)	93	3	3125968
282	32.7	11.6	1.6	chr5	57042599	57042915	(124495344)	+	L2	LINE/L2	2488	2840	(579)	3125962
74	0.0	1.4	1.4	chr5	57374714	57374784	(124163475)	+	(AG)n	Simple_repeat	1	72	(0)	3126685
30	5.5	0.0	0.0	chr5	60677289	60677326	(120860933)	+	(CA)n	Simple_repeat	1	38	(0)	3131164
43	0.0	0.0	0.0	chr5	60677327	60677363	(120860896)	+	(CT)n	Simple_repeat	1	37	(0)	3131165
221	25.4	6.3	0.0	chr5	60677466	60677524	(120860735)	C	MIR3	SINE/MIR	(6)	202	140	3131166
1155	18.8	0.9	1.8	chr5	60677525	60677747	(120860512)	C	AluJr	SINE/Alu	(0)	312	92	3131167
49	0.0	0.0	0.0	chr5	61228034	61228075	(120310184)	+	(TG)n	Simple_repeat	1	42	(0)	3131945
21	7.7	0.0	0.0	chr5	61228076	61228103	(120310156)	+	(AG)n	Simple_repeat	1	28	(0)	3131946
350	28.4	1.9	6.4	chr5	61228224	61228332	(120309927)	+	L2c	LINE/L2	3268	3371	(16)	3131947
1719	17.5	4.8	10.4	chr5	62196946	62197193	(119341066)	+	MLT2D	LTR/ERVL	147	383	(31)	3133338
60	0.0	0.0	0.0	chr5	62197194	62197244	(119341015)	+	(TG)n	Simple_repeat	1	51	(0)	3133342
1719	17.5	4.8	10.4	chr5	62197245	62197275	(119340984)	+	MLT2D	LTR/ERVL	384	414	(0)	3133338
2360	12.4	0.0	0.3	chr5	62197384	62197682	(119340577)	+	AluSz	SINE/Alu	1	298	(14)	3133343
23	3.7	0.0	0.0	chr5	62266291	62266318	(119271941)	+	(TC)n	Simple_repeat	1	28	(0)	3133460
22	0.0	0.0	0.0	chr5	62266318	62266341	(119271918)	+	(CA)n	Simple_repeat	1	24	(0)	3133461
12	14.4	0.0	0.0	chr5	62266363	62266386	(119271873)	+	(CAG)n	Simple_repeat	1	24	(0)	3133462
17	4.3	4.2	0.0	chr5	64970935	64970958	(116567301)	+	(AG)n	Simple_repeat	1	25	(0)	3137174
49	0.0	0.0	0.0	chr5	64970959	64971000	(116567259)	+	(GT)n	Simple_repeat	1	42	(0)	3137175
2491	6.1	4.2	0.0	chr5	65885644	65885938	(115652321)	C	AluYk4	SINE/Alu	(1)	310	3	3138604
74	5.1	0.0	0.0	chr5	65886001	65886081	(115652178)	+	(TC)n	Simple_repeat	1	81	(0)	3138605
183	30.8	0.0	1.9	chr5	65886091	65886143	(115652116)	+	MIRb	SINE/MIR	213	264	(4)	3138606
20	20.9	5.3	2.5	chr5	65925814	65925888	(115612371)	+	(CCCT)n	Simple_repeat	1	79	(0)	3138688
23	11.5	0.0	0.0	chr5	65926105	65926142	(115612117)	+	(GGAC)n	Simple_repeat	1	38	(0)	3138689
2030	18.7	6.0	3.1	chr5	66121336	66121536	(115416723)	+	MLT1C	LTR/ERVL-MaLR	1	199	(268)	3138963
31	5.8	0.0	0.0	chr5	66121537	66121572	(115416687)	+	(CA)n	Simple_repeat	1	36	(0)	3138964
2030	18.7	6.0	3.1	chr5	66121573	66121823	(115416436)	+	MLT1C	LTR/ERVL-MaLR	200	467	(0)	3138963
59	0.0	0.0	0.0	chr5	66648035	66648084	(114890175)	+	(TG)n	Simple_repeat	1	50	(0)	3139747
19	0.0	0.0	0.0	chr5	66648085	66648105	(114890154)	+	(AG)n	Simple_repeat	1	21	(0)	3139748
38	2.3	0.0	0.0	chr5	67958366	67958409	(113579850)	+	(AC)n	Simple_repeat	1	44	(0)	3141466
48	0.0	0.0	0.0	chr5	67958410	67958450	(113579809)	+	(AG)n	Simple_repeat	1	41	(0)	3141467
305	21.2	1.3	0.7	chr5	67958586	67958666	(113579593)	C	L2b	LINE/L2	(9)	3366	3291	3141468
40	0.0	0.0	0.0	chr5	68321078	68321111	(113217148)	+	(TC)n	Simple_repeat	1	34	(0)	3142066
29	0.0	0.0	0.0	chr5	68321112	68321143	(113217116)	+	(AC)n	Simple_repeat	1	32	(0)	3142067
40	20.1	0.9	4.5	chr5	68321289	68321397	(113216862)	+	(CTTC)n	Simple_repeat	1	110	(0)	3142068
43	0.0	0.0	0.0	chr5	68360786	68360822	(113177437)	+	(AG)n	Simple_repeat	1	37	(0)	3142135
2810	24.4	9.2	3.6	chr5	68360824	68362315	(113175944)	+	L1MEg	LINE/L1	2468	4068	(3169)	3142134
17	6.1	11.8	0.0	chr5	68420968	68421001	(113117258)	+	(CT)n	Simple_repeat	1	38	(0)	3142228
234	34.0	4.8	4.8	chr5	68421175	68421279	(113116980)	C	L2c	LINE/L2	(17)	3370	3266	3142229
423	28.6	14.0	5.0	chr5	68423084	68423602	(113114657)	C	L2c	LINE/L2	(1004)	2415	1843	3142229
509	31.9	6.6	2.7	chr5	68423630	68423848	(113114411)	+	MIRb	SINE/MIR	30	257	(11)	3142233
2051	15.0	14.5	1.1	chr5	68960458	68960827	(112577432)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3142975
1160	11.3	4.0	0.0	chr5	69334610	69334777	(112203482)	+	AluSx1	SINE/Alu	113	287	(25)	3143802
44	5.7	0.0	0.0	chr5	69334794	69334849	(112203410)	+	(GA)n	Simple_repeat	1	56	(0)	3143803
6667	8.7	4.8	18.6	chr5	69514530	69516541	(112021718)	C	SVA_D	Retroposon/SVA	(6)	1380	5	3144223
519	19.5	0.8	6.3	chr5	71344065	71344175	(110194084)	+	MLT1A	LTR/ERVL-MaLR	1	107	(267)	3147324
46	7.0	0.0	1.6	chr5	71344176	71344237	(110194022)	+	(TC)n	Simple_repeat	1	62	(0)	3147325
519	19.5	0.8	6.3	chr5	71344238	71344251	(110194008)	+	MLT1A	LTR/ERVL-MaLR	108	119	(255)	3147324
581	20.7	4.8	5.4	chr5	71344252	71344399	(110193860)	+	MLT1A	LTR/ERVL-MaLR	228	374	(0)	3147324
2855	16.8	9.4	5.0	chr5	71586451	71587046	(109951213)	C	MER51A	LTR/ERV1	(9)	625	1	3147717
49	18.0	4.5	2.2	chr5	71925769	71925825	(109612434)	+	GA-rich	Low_complexity	1	57	(0)	3148246
45	2.4	0.0	0.0	chr5	71925826	71925868	(109612391)	+	(AC)n	Simple_repeat	1	43	(0)	3148247
49	18.4	3.6	1.3	chr5	71925869	71925949	(109612310)	+	GA-rich	Low_complexity	1	82	(0)	3148248
12	19.9	2.3	4.4	chr5	71939538	71939581	(109598678)	+	(CTCT)n	Simple_repeat	1	45	(0)	3148268
17	4.3	0.0	0.0	chr5	72107258	72107281	(109430978)	+	(TCC)n	Simple_repeat	1	24	(0)	3148506
16	21.0	4.1	5.3	chr5	72107366	72107438	(109430821)	+	(CGCGGAG)n	Simple_repeat	1	76	(0)	3148507
628	12.5	0.0	2.1	chr5	72244684	72244779	(109293480)	C	AluSz6	SINE/Alu	(179)	133	40	3148676
21	0.0	0.0	6.7	chr5	72244863	72244892	(109293367)	+	(CT)n	Simple_repeat	1	30	(0)	3148677
464	31.2	3.0	3.0	chr5	72386197	72386427	(109151832)	C	MamRep605	LTR?	(50)	799	569	3148909
42	7.8	0.0	0.0	chr5	72386541	72386594	(109151665)	+	(TC)n	Simple_repeat	1	54	(0)	3148910
24	3.3	0.0	0.0	chr5	72386595	72386620	(109151639)	+	(AC)n	Simple_repeat	2	27	(0)	3148911
14	7.9	0.0	6.5	chr5	72452251	72452281	(109085978)	+	(AGGG)n	Simple_repeat	1	31	(0)	3149011
53	0.0	0.0	0.0	chr5	72720777	72720821	(108817438)	+	(CT)n	Simple_repeat	1	45	(0)	3149425
229	20.0	3.8	2.0	chr5	73542391	73542441	(107995818)	+	MLT1K	LTR/ERVL-MaLR	182	233	(362)	3150674
48	0.0	0.0	0.0	chr5	73542448	73542488	(107995771)	+	(GT)n	Simple_repeat	1	41	(0)	3150675
32	16.5	0.0	0.0	chr5	73542489	73542549	(107995710)	+	GA-rich	Low_complexity	1	61	(0)	3150676
222	28.1	5.0	5.0	chr5	73964399	73964499	(107573760)	+	L3b	LINE/CR1	5132	5232	(0)	3151294
57	1.9	0.0	0.0	chr5	73964515	73964567	(107573692)	+	(AG)n	Simple_repeat	1	53	(0)	3151295
2352	10.9	0.0	0.0	chr5	74579511	74579795	(106958464)	+	AluSx1	SINE/Alu	1	285	(27)	3152174
4433	7.1	1.4	2.9	chr5	74591530	74591966	(106946293)	C	MER41A	LTR/ERV1	(109)	445	1	3152193
423	26.2	3.1	1.6	chr5	74592001	74592128	(106946131)	+	Charlie2a	DNA/hAT-Charlie	6	135	(2726)	3152195
3321	13.5	6.2	6.7	chr5	74616461	74617077	(106921182)	C	LTR18B	LTR/ERVL	(0)	614	1	3152242
600	26.6	8.4	10.9	chr5	74818532	74818770	(106719489)	+	L1ME1	LINE/L1	5849	6083	(96)	3152552
40	0.0	0.0	0.0	chr5	74818771	74818804	(106719455)	+	(CT)n	Simple_repeat	1	34	(0)	3152553
600	26.6	8.4	10.9	chr5	74818805	74818893	(106719366)	+	L1ME1	LINE/L1	6084	6168	(11)	3152552
3532	17.0	8.1	5.7	chr5	74818909	74818937	(106719322)	+	L1MB7	LINE/L1	5304	5324	(860)	3152550
2254	11.7	0.7	0.0	chr5	74818938	74819235	(106719024)	+	AluSz6	SINE/Alu	1	300	(12)	3152554
51	3.9	0.0	0.0	chr5	75081685	75081737	(106456522)	+	(AG)n	Simple_repeat	1	53	(0)	3153052
15	4.7	4.5	0.0	chr5	75081760	75081781	(106456478)	+	(GA)n	Simple_repeat	1	23	(0)	3153053
205	34.0	2.7	2.7	chr5	75721886	75721997	(105816262)	+	MIRc	SINE/MIR	47	158	(110)	3153984
13	28.4	0.0	0.0	chr5	75722007	75722049	(105816210)	+	A-rich	Low_complexity	1	43	(0)	3153985
18	11.7	0.0	0.0	chr5	75722053	75722080	(105816179)	+	(TC)n	Simple_repeat	1	28	(0)	3153986
17	4.9	0.0	0.0	chr5	75722960	75722980	(105815279)	+	(AG)n	Simple_repeat	1	21	(0)	3153989
2054	12.5	4.4	0.3	chr5	75723096	75723425	(105814834)	C	L1PA16	LINE/L1	(9)	6157	5814	3153990
3454	15.7	10.5	1.0	chr5	76781365	76782000	(104756259)	+	MER41-int	LTR/ERV1	1	606	(5340)	3155594
31	3.3	0.0	0.0	chr5	76782002	76782032	(104756227)	+	(CT)n	Simple_repeat	1	31	(0)	3155595
1423	11.9	3.8	7.7	chr5	76782038	76782076	(104756183)	+	MER41-int	LTR/ERV1	1095	1116	(4830)	3155594
2298	10.4	0.3	0.3	chr5	76782077	76782385	(104755874)	+	AluSx1	SINE/Alu	3	311	(1)	3155596
31	3.3	0.0	0.0	chr5	76850336	76850366	(104687893)	+	(GA)n	Simple_repeat	1	31	(0)	3155758
380	22.8	5.3	3.0	chr5	77647875	77648035	(103890224)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	346	3156927
36	0.0	0.0	0.0	chr5	77648039	77648069	(103890190)	+	(GT)n	Simple_repeat	1	31	(0)	3156928
21	4.0	0.0	0.0	chr5	77648070	77648095	(103890164)	+	(AG)n	Simple_repeat	1	26	(0)	3156929
498	18.6	8.5	0.0	chr5	77648108	77648204	(103890055)	C	AluJo	SINE/Alu	(70)	242	137	3156930
740	32.7	2.4	0.0	chr5	77648209	77648456	(103889803)	C	MLT1J	LTR/ERVL-MaLR	(160)	352	99	3156927
519	25.2	5.7	3.4	chr5	78221912	78222116	(103316143)	+	L1MC4	LINE/L1	4082	4291	(1923)	3157766
2157	9.8	0.0	1.8	chr5	78678807	78679092	(102859167)	+	AluSx	SINE/Alu	1	281	(31)	3158423
26	0.0	0.0	0.0	chr5	78679094	78679118	(102859141)	+	(AAAAC)n	Simple_repeat	1	25	(0)	3158424
18	0.0	0.0	0.0	chr5	79318742	79318761	(102219498)	+	(AT)n	Simple_repeat	1	20	(0)	3159552
49	0.0	0.0	0.0	chr5	79318762	79318803	(102219456)	+	(AG)n	Simple_repeat	1	42	(0)	3159553
47	2.3	0.0	0.0	chr5	79952400	79952444	(101585815)	+	(CT)n	Simple_repeat	1	45	(0)	3160611
1460	20.1	10.6	3.8	chr5	81589678	81590045	(99948214)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3163370
287	32.0	7.2	7.2	chr5	81590046	81590118	(99948141)	C	MIRc	SINE/MIR	(208)	60	1	3163369
1393	16.5	12.9	0.0	chr5	81757849	81758091	(99780168)	+	AluJo	SINE/Alu	1	279	(33)	3163568
40	2.6	0.0	0.0	chr5	81758093	81758131	(99780128)	+	(GA)n	Simple_repeat	1	39	(0)	3163569
12	13.0	0.0	3.6	chr5	81758135	81758162	(99780097)	+	GA-rich	Low_complexity	1	28	(0)	3163570
255	18.6	6.3	0.0	chr5	81758171	81758229	(99780030)	C	MADE2	DNA/TcMar-Mariner	(14)	66	4	3163571
281	25.9	9.6	0.0	chr5	81758285	81758369	(99779890)	C	MIRb	SINE/MIR	(7)	261	168	3163572
555	33.0	11.4	5.9	chr5	81763141	81763820	(99774439)	C	L2c	LINE/L2	(13)	3374	2655	3163585
29	6.3	0.0	0.0	chr5	81798550	81798583	(99739676)	+	(TG)n	Simple_repeat	1	34	(0)	3163635
55	0.0	0.0	0.0	chr5	81798604	81798650	(99739609)	+	(CA)n	Simple_repeat	1	47	(0)	3163636
189	35.3	4.2	4.9	chr5	81798729	81798871	(99739388)	C	L2	LINE/L2	(450)	2969	2828	3163637
336	29.4	9.2	2.6	chr5	81855300	81855491	(99682768)	+	UCON80_AMi	Unknown	5	210	(12)	3163724
19	11.1	0.0	0.0	chr5	81855573	81855619	(99682640)	+	(TG)n	Simple_repeat	1	47	(0)	3163725
505	30.8	4.7	0.0	chr5	82447317	82447498	(99090761)	+	MIRb	SINE/MIR	7	197	(71)	3164651
37	9.5	0.0	0.0	chr5	82447499	82447554	(99090705)	+	(GAGA)n	Simple_repeat	1	56	(0)	3164652
926	25.1	4.2	0.5	chr5	82447555	82447790	(99090469)	+	MIR	SINE/MIR	6	241	(21)	3164653
40	0.0	0.0	0.0	chr5	82661950	82661983	(98876276)	+	(AG)n	Simple_repeat	1	34	(0)	3164931
648	28.7	13.7	0.4	chr5	82662055	82662320	(98875939)	+	L2a	LINE/L2	3120	3426	(0)	3164932
18	4.5	0.0	0.0	chr5	83026313	83026335	(98511924)	+	(AG)n	Simple_repeat	1	23	(0)	3165418
17	28.8	1.6	1.6	chr5	87267811	87267873	(94270386)	+	(CTCC)n	Simple_repeat	1	64	(0)	3170894
11	32.9	0.0	0.0	chr5	87267989	87268037	(94270222)	+	(GCAGCG)n	Simple_repeat	1	49	(0)	3170895
325	23.9	15.0	4.3	chr5	89032964	89033103	(92505156)	C	MLT1O	LTR/ERVL-MaLR	(18)	524	370	3173064
60	3.4	0.0	0.0	chr5	89033104	89033163	(92505096)	+	(TC)n	Simple_repeat	1	60	(0)	3173065
325	23.9	15.0	4.3	chr5	89033164	89033206	(92505053)	C	MLT1O	LTR/ERVL-MaLR	(173)	369	318	3173064
24	16.2	0.0	0.0	chr5	89119669	89119716	(92418543)	+	(CTCTCT)n	Simple_repeat	1	48	(0)	3173171
1198	20.2	12.6	0.6	chr5	90133794	90133963	(91404296)	+	MLT1B	LTR/ERVL-MaLR	1	197	(193)	3174374
56	4.7	1.4	1.4	chr5	90133964	90134032	(91404227)	+	(TC)n	Simple_repeat	1	70	(0)	3174375
1198	20.2	12.6	0.6	chr5	90134033	90134204	(91404055)	+	MLT1B	LTR/ERVL-MaLR	198	389	(1)	3174374
248	31.3	10.4	3.0	chr5	90410217	90410384	(91127875)	C	MER5A	DNA/hAT-Charlie	(5)	184	3	3174712
44	2.4	0.0	0.0	chr5	91054062	91054103	(90484156)	+	(TG)n	Simple_repeat	1	42	(0)	3175561
29	5.6	0.0	0.0	chr5	91054104	91054140	(90484119)	+	(AG)n	Simple_repeat	1	37	(0)	3175562
1904	21.4	9.7	8.4	chr5	91181345	91181905	(90356354)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	3175748
15	22.1	0.0	2.3	chr5	91185633	91185676	(90352583)	+	(AGATAG)n	Simple_repeat	1	44	(0)	3175754
2378	16.7	17.7	1.4	chr5	91185684	91186272	(90351987)	+	MER39	LTR/ERV1	1	706	(1)	3175755
1537	19.5	1.1	1.1	chr5	91341941	91342212	(90196047)	+	AluJo	SINE/Alu	2	273	(39)	3176100
31	3.3	0.0	0.0	chr5	91342218	91342248	(90196011)	+	(TC)n	Simple_repeat	1	31	(0)	3176101
951	16.4	5.2	0.0	chr5	91342249	91342394	(90195865)	C	AluSx1	SINE/Alu	(26)	286	133	3176102
1928	14.5	3.0	0.3	chr5	91342400	91342688	(90195571)	C	AluSz	SINE/Alu	(15)	297	1	3176103
23	0.0	0.0	0.0	chr5	91418148	91418172	(90120087)	+	(AC)n	Simple_repeat	1	25	(0)	3176230
39	2.7	0.0	0.0	chr5	91418173	91418210	(90120049)	+	(CT)n	Simple_repeat	1	38	(0)	3176231
248	8.6	3.6	0.2	chr5	93581669	93582088	(87956171)	+	(TC)n	Simple_repeat	1	435	(0)	3178828
17	15.2	4.3	2.1	chr5	93582091	93582136	(87956123)	+	(CCTCTC)n	Simple_repeat	1	48	(0)	3178829
75	3.5	8.6	0.0	chr5	93583272	93583388	(87954871)	+	(TC)n	Simple_repeat	1	127	(0)	3178832
21	26.9	3.3	3.2	chr5	93583396	93583486	(87954773)	+	(TCT)n	Simple_repeat	1	94	(0)	3178833
98	4.8	0.0	0.0	chr5	95207929	95208037	(86330222)	+	(GAGAGAGAGG)n	Simple_repeat	1	109	(0)	3180825
13	0.0	0.0	0.0	chr5	95208087	95208103	(86330156)	+	(TGT)n	Simple_repeat	1	17	(0)	3180826
2165	11.8	0.0	0.3	chr5	95208104	95208390	(86329869)	C	AluSq2	SINE/Alu	(27)	286	1	3180827
4427	9.5	2.2	0.5	chr5	95728658	95729280	(85808979)	+	MER41B	LTR/ERV1	1	634	(0)	3181579
16	19.2	2.0	3.9	chr5	95731312	95731372	(85806887)	+	(GCAGCG)n	Simple_repeat	1	59	(0)	3181581
509	30.4	8.6	7.8	chr5	96175973	96176307	(85361952)	C	L2c	LINE/L2	(128)	3259	2922	3182228
681	21.3	4.9	2.5	chr5	96176362	96176520	(85361739)	C	L2a	LINE/L2	(0)	3426	3264	3182230
63	1.8	0.0	0.0	chr5	96328374	96328431	(85209828)	+	(TC)n	Simple_repeat	1	58	(0)	3182422
18	4.8	0.0	0.0	chr5	97030599	97030620	(84507639)	+	(TC)n	Simple_repeat	1	22	(0)	3183491
59	0.0	0.0	1.8	chr5	97030621	97030675	(84507584)	+	(TG)n	Simple_repeat	1	55	(0)	3183492
266	33.6	13.9	5.5	chr5	103334874	103335130	(78203129)	C	L2c	LINE/L2	(1006)	2413	2133	3191298
78	3.9	0.0	0.0	chr5	103335131	103335210	(78203049)	+	(GA)n	Simple_repeat	1	80	(0)	3191300
266	33.6	13.9	5.5	chr5	103335211	103335898	(78202361)	C	L2c	LINE/L2	(1287)	2132	1377	3191298
468	28.8	6.9	7.4	chr5	108390318	108390433	(73147826)	+	Charlie20a	DNA/hAT-Charlie	653	766	(41)	3197569
28	3.1	0.0	0.0	chr5	108390551	108390583	(73147676)	+	(AG)n	Simple_repeat	1	33	(0)	3197571
37	0.0	0.0	0.0	chr5	108390584	108390615	(73147644)	+	(GT)n	Simple_repeat	1	32	(0)	3197572
26	15.8	0.0	0.0	chr5	108419578	108419626	(73118633)	+	(TCTC)n	Simple_repeat	1	49	(0)	3197616
54	0.0	0.0	0.0	chr5	108419627	108419672	(73118587)	+	(CA)n	Simple_repeat	1	46	(0)	3197617
1042	25.0	4.2	3.2	chr5	108531424	108532124	(73006135)	+	MER61E	LTR/ERV1	1	728	(0)	3197775
1760	14.0	4.0	5.7	chr5	108736803	108737188	(72801071)	C	THE1D	LTR/ERVL-MaLR	(2)	379	1	3198066
85	3.6	0.0	0.0	chr5	110108664	110108749	(71429510)	+	(GA)n	Simple_repeat	1	86	(0)	3199889
1065	26.9	2.0	1.6	chr5	110620400	110620577	(70917682)	+	MER90a	LTR/ERV1	361	540	(74)	3200438
112	0.9	3.5	0.0	chr5	110620578	110620691	(70917568)	+	(TC)n	Simple_repeat	1	118	(0)	3200439
1065	26.9	2.0	1.6	chr5	110620692	110620765	(70917494)	+	MER90a	LTR/ERV1	541	614	(0)	3200438
1568	13.8	18.7	4.7	chr5	111392123	111392487	(70145772)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3201368
72	1.5	0.0	0.0	chr5	111531937	111532002	(70006257)	+	(CT)n	Simple_repeat	1	66	(0)	3201567
24	34.9	0.0	0.0	chr5	111757369	111757454	(69780805)	+	(TC)n	Simple_repeat	1	86	(0)	3201826
46401	5.2	1.2	0.1	chr5	112444459	112450410	(69087849)	+	HERV17-int	LTR/ERV1	1	6017	(2609)	3202771
351	25.5	1.8	1.8	chr5	116050650	116050761	(65487498)	C	LTR82A	LTR/ERVL	(655)	217	106	3207653
41	0.0	0.0	0.0	chr5	116050781	116050815	(65487444)	+	(TC)n	Simple_repeat	1	35	(0)	3207654
37	5.1	0.0	0.0	chr5	116050817	116050857	(65487402)	+	(AC)n	Simple_repeat	1	41	(0)	3207655
545	30.7	7.6	0.8	chr5	119278072	119278317	(62259942)	C	MLT1L	LTR/ERVL-MaLR	(2)	608	345	3212091
22	15.3	0.0	0.0	chr5	119278340	119278376	(62259883)	+	GA-rich	Low_complexity	1	37	(0)	3212092
53	0.0	0.0	0.0	chr5	119278377	119278421	(62259838)	+	(GT)n	Simple_repeat	1	45	(0)	3212093
876	26.3	5.8	9.8	chr5	120555331	120555726	(60982533)	C	MLT1B	LTR/ERVL-MaLR	(11)	379	1	3213673
415	30.9	3.2	3.9	chr5	122104686	122104804	(59433455)	C	MamRep38	DNA/hAT	(130)	165	43	3215522
1997	19.1	8.7	4.0	chr5	122104805	122104850	(59433409)	C	MLT2B1	LTR/ERVL	(0)	520	475	3215523
56	0.0	0.0	0.0	chr5	122104851	122104898	(59433361)	+	(GT)n	Simple_repeat	1	48	(0)	3215524
1997	19.1	8.7	4.0	chr5	122104899	122105346	(59432913)	C	MLT2B1	LTR/ERVL	(46)	474	1	3215523
33	0.0	0.0	0.0	chr5	122149886	122149913	(59388346)	+	(TG)n	Simple_repeat	1	28	(0)	3215585
38	12.4	0.0	0.0	chr5	122149921	122149982	(59388277)	+	(GAGA)n	Simple_repeat	1	62	(0)	3215586
31	0.0	0.0	0.0	chr5	122574950	122574983	(58963276)	+	(CA)n	Simple_repeat	1	34	(0)	3216082
43	2.5	0.0	0.0	chr5	122574984	122575024	(58963235)	+	(CT)n	Simple_repeat	1	41	(0)	3216083
26	17.8	3.1	1.5	chr5	123512385	123512449	(58025810)	+	(CTCG)n	Simple_repeat	1	67	(0)	3217484
1924	22.4	7.0	6.7	chr5	124682829	124683384	(56854875)	+	MLT1F2	LTR/ERVL-MaLR	1	558	(2)	3218966
2100	11.9	9.8	6.8	chr5	126419121	126419534	(55118725)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3221150
1992	25.0	10.4	6.1	chr5	131523415	131524492	(50013767)	+	L1MEg	LINE/L1	896	2024	(4218)	3228098
311	15.7	1.4	1.4	chr5	131524475	131524545	(50013714)	+	L1MEg	LINE/L1	2264	2334	(3812)	3228098
47	11.1	3.8	0.0	chr5	131524555	131524633	(50013626)	+	(GA)n	Simple_repeat	1	82	(0)	3228101
1984	16.0	0.0	0.0	chr5	131524634	131524915	(50013344)	C	AluSx	SINE/Alu	(30)	282	1	3228102
17534	14.5	2.5	2.8	chr5	131883590	131885341	(49652918)	+	L1MA2	LINE/L1	14	1758	(5807)	3228678
98	0.0	0.0	0.0	chr5	131885342	131885424	(49652835)	+	(AG)n	Simple_repeat	1	83	(0)	3228679
17534	14.5	2.5	2.8	chr5	131885425	131886800	(49651459)	+	L1MA2	LINE/L1	1759	3134	(4431)	3228678
1769	16.3	0.3	1.0	chr5	132787799	132788105	(48750154)	C	AluJb	SINE/Alu	(6)	306	2	3229915
2208	22.9	12.2	10.0	chr5	132788106	132788161	(48750098)	+	LTR102_Mam	LTR/ERVL	545	578	(273)	3229914
67	1.6	0.0	0.0	chr5	132788162	132788223	(48750036)	+	(GA)n	Simple_repeat	1	62	(0)	3229916
2208	22.9	12.2	10.0	chr5	132788224	132788503	(48749756)	+	LTR102_Mam	LTR/ERVL	579	851	(0)	3229914
269	30.4	15.0	0.0	chr5	132790214	132790338	(48747921)	C	L2c	LINE/L2	(0)	3387	3241	3229920
12	19.9	0.0	0.0	chr5	132790635	132790663	(48747596)	+	(TCCTT)n	Simple_repeat	1	29	(0)	3229921
264	33.0	3.7	2.8	chr5	133052684	133052789	(48485470)	+	L2b	LINE/L2	3266	3372	(3)	3230469
2655	11.6	3.0	5.7	chr5	133939655	133940056	(47598203)	+	MSTA	LTR/ERVL-MaLR	1	394	(34)	3231615
23	21.0	5.4	4.1	chr5	133941742	133941758	(47596501)	+	(CT)n	Simple_repeat	1	17	(0)	3231617
38	0.0	0.0	0.0	chr5	133941759	133941791	(47596468)	+	(TG)n	Simple_repeat	1	33	(0)	3231618
23	21.0	5.4	4.1	chr5	133941792	133941800	(47596459)	+	(CT)n	Simple_repeat	2	26	(50)	3231619
16	19.3	4.0	1.9	chr5	133941801	133941850	(47596409)	+	(CCCTT)n	Simple_repeat	1	52	(0)	3231620
23	21.0	5.4	4.1	chr5	133941851	133941865	(47596394)	+	(CT)n	Simple_repeat	27	76	(0)	3231619
694	15.3	0.0	0.0	chr5	133941902	133941999	(47596260)	+	AluJo	SINE/Alu	21	118	(194)	3231621
2677	14.5	15.8	3.9	chr5	134245024	134245561	(47292698)	C	LTR18B	LTR/ERVL	(0)	614	1	3232165
497	28.3	14.4	0.8	chr5	134994611	134994856	(46543403)	+	L2a	LINE/L2	2798	3082	(337)	3233748
58	20.4	0.8	2.2	chr5	134994911	134995044	(46543215)	+	(TTCC)n	Simple_repeat	1	135	(0)	3233749
30	0.0	0.0	0.0	chr5	135236500	135236525	(46301734)	+	(TC)n	Simple_repeat	1	26	(0)	3234058
1020	32.2	10.2	4.2	chr5	135255181	135255983	(46282276)	+	L1ME2	LINE/L1	25	880	(5543)	3234085
1483	27.0	11.3	2.9	chr5	135256027	135256948	(46281311)	+	L1ME2	LINE/L1	960	2131	(4906)	3234085
1236	23.5	2.1	12.4	chr5	135517497	135517914	(46020345)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3234413
1418	27.8	3.6	7.3	chr5	135817856	135818054	(45720205)	+	L1MEf	LINE/L1	449	641	(5999)	3234797
77	1.4	0.0	0.0	chr5	135818055	135818124	(45720135)	+	(CT)n	Simple_repeat	1	70	(0)	3234800
3644	23.8	3.3	3.7	chr5	135818125	135819388	(45718871)	+	L1MEf	LINE/L1	642	1791	(4849)	3234797
2293	8.2	3.9	9.8	chr5	136523707	136524112	(45014147)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3235785
1646	19.9	1.9	4.4	chr5	136712960	136713409	(44824850)	+	MLT2B4	LTR/ERVL	1	455	(65)	3236020
40	0.0	4.9	0.0	chr5	136713410	136713450	(44824809)	+	(TC)n	Simple_repeat	1	43	(0)	3236021
1388	24.9	6.2	5.6	chr5	136713451	136713515	(44824744)	+	MLT2B4	LTR/ERVL	456	519	(1)	3236020
1003	18.9	7.6	1.9	chr5	136713516	136713774	(44824485)	+	L1MC2	LINE/L1	6062	6336	(8)	3236019
1036	15.1	0.0	0.0	chr5	138488172	138488337	(43049922)	+	AluSx	SINE/Alu	143	308	(4)	3238962
17	21.3	4.1	0.0	chr5	138543114	138543162	(42995097)	+	(GGC)n	Simple_repeat	1	51	(0)	3239069
1335	15.3	0.0	1.0	chr5	138712142	138712343	(42825916)	+	AluJo	SINE/Alu	1	200	(112)	3239422
1189	31.0	1.9	10.0	chr5	138712344	138712600	(42825659)	C	L2a	LINE/L2	(210)	3216	3008	3239421
2207	12.2	0.0	0.3	chr5	138712601	138712902	(42825357)	+	AluSz6	SINE/Alu	1	301	(11)	3239423
840	25.8	1.4	0.0	chr5	139475742	139475954	(42062305)	C	LTR33	LTR/ERVL	(299)	216	1	3240837
838	17.6	0.0	2.6	chr5	139485938	139486090	(42052169)	+	FRAM	SINE/Alu	1	149	(27)	3240862
36	0.0	0.0	0.0	chr5	139486091	139486121	(42052138)	+	(AG)n	Simple_repeat	1	31	(0)	3240863
2621	20.7	4.8	0.9	chr5	140011331	140011866	(41526393)	+	MLT1F2	LTR/ERVL-MaLR	1	558	(2)	3241861
1239	20.4	11.2	5.8	chr5	142072408	142072509	(39465750)	+	MLT1A0	LTR/ERVL-MaLR	1	100	(265)	3245191
1696	15.4	10.0	2.3	chr5	142072510	142072860	(39465399)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3245192
239	33.3	7.1	4.7	chr5	142202637	142202828	(39335431)	+	L1ME3G	LINE/L1	319	515	(409)	3245439
15	0.0	0.0	0.0	chr5	142202929	142202945	(39335314)	+	(GT)n	Simple_repeat	1	17	(0)	3245440
52	10.2	0.0	0.0	chr5	142202945	142203018	(39335241)	+	(GA)n	Simple_repeat	1	74	(0)	3245441
655	21.1	6.7	0.9	chr5	142203021	142203321	(39334938)	C	MLT2F	LTR/ERVL	(69)	594	254	3245442
664	28.0	4.1	1.1	chr5	142306114	142306301	(39231958)	+	MIRb	SINE/MIR	2	195	(73)	3245696
888	14.3	3.5	2.9	chr5	142306304	142306443	(39231816)	+	AluSx	SINE/Alu	137	277	(35)	3245697
31	3.3	0.0	0.0	chr5	142306445	142306475	(39231784)	+	(TC)n	Simple_repeat	1	31	(0)	3245698
1706	15.2	1.9	6.2	chr5	142306626	142306947	(39231312)	+	AluJr	SINE/Alu	5	312	(0)	3245699
1202	21.2	12.8	7.4	chr5	142832197	142832563	(38705696)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	3246741
17	4.5	0.0	0.0	chr5	142839878	142839893	(38698366)	+	(GA)n	Simple_repeat	1	16	(0)	3246753
30	0.0	0.0	0.0	chr5	142839894	142839922	(38698337)	+	(GGAGG)n	Simple_repeat	1	29	(0)	3246754
767	25.2	3.5	2.5	chr5	142839931	142840129	(38698130)	C	MLT1G3	LTR/ERVL-MaLR	(394)	201	1	3246755
324	31.7	0.9	2.8	chr5	142857856	142857962	(38680297)	C	MER5A	DNA/hAT-Charlie	(0)	189	85	3246783
38	14.8	1.4	0.0	chr5	142858014	142858061	(38680198)	+	GA-rich	Low_complexity	1	49	(0)	3246784
40	0.0	0.0	0.0	chr5	142858062	142858095	(38680164)	+	(TG)n	Simple_repeat	1	34	(0)	3246785
38	14.8	1.4	0.0	chr5	142858096	142858115	(38680144)	+	GA-rich	Low_complexity	50	69	(0)	3246786
16	0.0	0.0	0.0	chr5	142858115	142858132	(38680127)	+	(GT)n	Simple_repeat	1	18	(0)	3246787
2399	11.2	0.0	0.0	chr5	142948823	142949116	(38589143)	+	AluSx1	SINE/Alu	1	294	(18)	3246942
100	0.0	2.2	0.0	chr5	142949166	142949257	(38589002)	+	(AG)n	Simple_repeat	1	94	(0)	3246943
43	0.0	0.0	0.0	chr5	145528691	145528727	(36009532)	+	(AC)n	Simple_repeat	1	37	(0)	3250860
23	0.0	0.0	0.0	chr5	145528728	145528752	(36009507)	+	(GA)n	Simple_repeat	1	25	(0)	3250861
550	33.0	3.6	3.6	chr5	147935534	147935756	(33602503)	C	MIR	SINE/MIR	(0)	262	40	3255097
37	0.0	0.0	0.0	chr5	147935839	147935870	(33602389)	+	(TG)n	Simple_repeat	1	32	(0)	3255098
18	0.0	0.0	0.0	chr5	147935871	147935890	(33602369)	+	(AG)n	Simple_repeat	1	20	(0)	3255099
3474	17.1	0.8	1.2	chr5	147935897	147935984	(33602275)	C	L1MA4A	LINE/L1	(133)	6170	6089	3255100
2413	7.9	0.0	0.3	chr5	147935985	147936275	(33601984)	+	AluSx1	SINE/Alu	9	298	(14)	3255101
16	8.7	4.0	0.0	chr5	148229836	148229860	(33308399)	+	(AG)n	Simple_repeat	1	26	(0)	3255576
206	27.2	16.3	1.9	chr5	148229861	148229965	(33308294)	C	MIRc	SINE/MIR	(128)	140	18	3255577
21	13.4	0.0	0.0	chr5	148574381	148574413	(32963846)	+	(CT)n	Simple_repeat	1	33	(0)	3256103
15	24.9	0.0	0.0	chr5	148574414	148574423	(32963836)	+	(CTCTCA)n	Simple_repeat	1	43	(0)	3256104
190	28.9	4.6	6.7	chr5	148574488	148574576	(32963683)	C	MIRb	SINE/MIR	(71)	197	111	3256105
38	0.0	0.0	0.0	chr5	148658891	148658923	(32879336)	+	(GT)n	Simple_repeat	1	33	(0)	3256240
39	14.1	2.9	0.0	chr5	148658924	148658993	(32879266)	+	GA-rich	Low_complexity	1	72	(0)	3256241
1153	8.0	3.0	0.0	chr5	149169973	149170134	(32368125)	C	L1PA13	LINE/L1	(0)	6163	5997	3257140
59	1.6	3.2	0.0	chr5	149170229	149170290	(32367969)	+	(TC)n	Simple_repeat	1	64	(0)	3257141
260	24.3	5.1	2.6	chr5	149170293	149170368	(32367891)	C	MLT1K	LTR/ERVL-MaLR	(209)	386	309	3257142
15	21.1	5.1	0.0	chr5	149242417	149242455	(32295804)	+	(CT)n	Simple_repeat	1	41	(0)	3257285
49	2.2	0.0	0.0	chr5	149307812	149307857	(32230402)	+	(CT)n	Simple_repeat	1	46	(0)	3257433
2077	11.7	2.7	0.3	chr5	149307874	149308163	(32230096)	+	AluSz	SINE/Alu	1	297	(15)	3257434
264	30.5	5.6	4.8	chr5	149320921	149321044	(32217215)	C	MamRep605	LTR?	(248)	601	477	3257468
532	31.1	11.4	4.7	chr5	149682414	149682730	(31855529)	+	L2b	LINE/L2	3034	3374	(1)	3258294
195	24.2	9.6	0.0	chr5	149682913	149682978	(31855281)	+	L3	LINE/CR1	4018	4090	(9)	3258295
19	19.9	3.9	0.0	chr5	149731600	149731651	(31806608)	+	G-rich	Low_complexity	1	54	(0)	3258411
364	17.0	15.9	27.4	chr5	149895669	149895887	(31642372)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	3258776
337	30.7	2.8	2.1	chr5	149895999	149896141	(31642118)	C	MER103C	DNA/hAT-Charlie	(149)	148	5	3258777
895	15.0	0.0	0.0	chr5	150224879	150225011	(31313248)	+	AluJb	SINE/Alu	1	133	(179)	3259479
53	3.8	0.0	0.0	chr5	150225042	150225095	(31313164)	+	(GA)n	Simple_repeat	1	54	(0)	3259480
300	36.4	10.0	2.5	chr5	150449218	150449420	(31088839)	C	MIRb	SINE/MIR	(43)	225	6	3259964
14	18.9	0.0	2.6	chr5	150449424	150449461	(31088798)	+	(CGTGGC)n	Simple_repeat	1	38	(0)	3259965
53	0.0	0.0	0.0	chr5	150473384	150473428	(31064831)	+	(GT)n	Simple_repeat	1	45	(0)	3260035
45	9.5	0.0	0.0	chr5	150473429	150473495	(31064764)	+	(AGAG)n	Simple_repeat	1	67	(0)	3260036
377	28.5	1.9	7.4	chr5	150657192	150657354	(30880905)	+	MIR3	SINE/MIR	11	164	(44)	3260457
21	4.0	0.0	0.0	chr5	150657407	150657432	(30880827)	+	(CT)n	Simple_repeat	1	26	(0)	3260458
53	0.0	0.0	0.0	chr5	150657433	150657477	(30880782)	+	(CA)n	Simple_repeat	1	45	(0)	3260459
43	0.0	0.0	0.0	chr5	150701438	150701474	(30836785)	+	(TC)n	Simple_repeat	1	37	(0)	3260548
23	12.6	0.0	0.0	chr5	150701477	150701511	(30836748)	+	(CA)n	Simple_repeat	1	35	(0)	3260549
563	21.1	9.5	2.6	chr5	150701513	150701668	(30836591)	+	MER53	DNA/hAT	26	193	(0)	3260550
1505	16.9	1.0	3.6	chr5	150767507	150767773	(30770486)	+	MLT2D	LTR/ERVL	116	379	(35)	3260656
60	0.0	0.0	0.0	chr5	150767774	150767824	(30770435)	+	(AC)n	Simple_repeat	1	51	(0)	3260657
1505	16.9	1.0	3.6	chr5	150767825	150767863	(30770396)	+	MLT2D	LTR/ERVL	380	414	(0)	3260656
62	1.8	0.0	0.0	chr5	151059773	151059829	(30478430)	+	(GA)n	Simple_repeat	1	57	(0)	3261066
35	0.0	0.0	0.0	chr5	151059830	151059867	(30478392)	+	(TG)n	Simple_repeat	1	38	(0)	3261067
296	27.4	4.4	8.6	chr5	151213952	151214118	(30324141)	C	MIR3	SINE/MIR	(22)	186	28	3261410
18	8.7	0.0	0.0	chr5	151327742	151327770	(30210489)	+	(CT)n	Simple_repeat	1	29	(0)	3261658
317	28.7	8.1	0.7	chr5	151327808	151328018	(30210241)	+	MIR3	SINE/MIR	16	253	(15)	3261659
25	3.5	0.0	0.0	chr5	151685393	151685422	(29852837)	+	(CT)n	Simple_repeat	1	30	(0)	3262390
329	24.4	16.9	5.4	chr5	151700829	151701046	(29837213)	+	L1M4c	LINE/L1	1053	1305	(5079)	3262434
66	23.2	2.3	0.6	chr5	151717786	151717962	(29820297)	+	(AGAGAC)n	Simple_repeat	1	181	(0)	3262472
574	30.7	3.2	3.6	chr5	151717997	151718249	(29820010)	+	MLT1J	LTR/ERVL-MaLR	1	252	(260)	3262473
343	23.1	6.3	3.7	chr5	154219613	154219720	(27318539)	+	MER5A	DNA/hAT-Charlie	78	188	(1)	3266686
28	5.8	0.0	0.0	chr5	154219803	154219838	(27318421)	+	(CT)n	Simple_repeat	1	36	(0)	3266687
34	0.0	3.0	0.0	chr5	154219839	154219871	(27318388)	+	(CA)n	Simple_repeat	1	34	(0)	3266688
628	12.8	0.0	2.1	chr5	154388808	154388901	(27149358)	+	FLAM_C	SINE/Alu	42	133	(10)	3267047
38	20.0	1.3	0.0	chr5	154388907	154388983	(27149276)	+	GA-rich	Low_complexity	1	78	(0)	3267048
441	22.2	0.9	3.6	chr5	154388988	154389099	(27149160)	+	MER117	DNA/hAT-Charlie	9	117	(80)	3267049
648	26.6	9.2	4.4	chr5	154546189	154546416	(26991843)	+	MIR	SINE/MIR	9	248	(14)	3267415
51	0.0	0.0	0.0	chr5	154546420	154546463	(26991796)	+	(TG)n	Simple_repeat	1	44	(0)	3267416
18	14.7	0.0	0.0	chr5	154546466	154546495	(26991764)	+	(AG)n	Simple_repeat	1	30	(0)	3267417
1086	26.6	8.7	2.6	chr5	154546504	154547001	(26991258)	C	L1ME5	LINE/L1	(20)	6174	5644	3267418
17	26.9	0.0	3.8	chr5	154837181	154837233	(26701026)	+	(CT)n	Simple_repeat	1	53	(0)	3268148
32	2.9	0.0	0.0	chr5	154837276	154837310	(26700949)	+	(TTTG)n	Simple_repeat	1	35	(0)	3268149
590	17.8	0.0	0.0	chr5	154837330	154837419	(26700840)	C	AluJr	SINE/Alu	(213)	99	10	3268150
798	29.2	12.0	7.5	chr5	155047690	155047746	(26490513)	C	MLT1O	LTR/ERVL-MaLR	(49)	493	441	3268549
2131	13.0	7.1	1.4	chr5	155047747	155048105	(26490154)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3268550
20	0.0	0.0	0.0	chr5	157098910	157098931	(24439328)	+	(AG)n	Simple_repeat	1	22	(0)	3272033
13	16.9	0.0	8.5	chr5	157731251	157731297	(23806962)	+	GA-rich	Low_complexity	1	47	(0)	3273268
807	16.1	0.0	0.0	chr5	157830594	157830711	(23707548)	+	AluJo	SINE/Alu	1	118	(194)	3273411
53	2.0	0.0	0.0	chr5	157830748	157830797	(23707462)	+	(CT)n	Simple_repeat	1	50	(0)	3273412
17	0.0	0.0	0.0	chr5	157830798	157830816	(23707443)	+	(AT)n	Simple_repeat	1	19	(0)	3273413
1236	15.5	0.0	8.0	chr5	157830829	157831067	(23707192)	+	AluJb	SINE/Alu	87	306	(6)	3273414
26	6.1	0.0	0.0	chr5	157949188	157949221	(23589038)	+	(TTTGT)n	Simple_repeat	1	34	(0)	3273694
73	5.4	6.8	0.0	chr5	159050147	159050263	(22487996)	+	(TC)n	Simple_repeat	1	125	(0)	3275490
719	28.6	16.5	5.2	chr5	159547207	159547509	(21990750)	+	MLT1G	LTR/ERVL-MaLR	1	315	(264)	3276321
37	9.5	0.0	0.0	chr5	159547536	159547591	(21990668)	+	(GAGA)n	Simple_repeat	1	56	(0)	3276322
439	24.6	0.8	4.2	chr5	159547615	159547740	(21990519)	+	MLT1G	LTR/ERVL-MaLR	393	629	(51)	3276321
935	26.4	5.5	1.4	chr5	159547829	159548132	(21990127)	C	L1M5	LINE/L1	(478)	5676	5355	3276323
1578	30.1	8.1	9.8	chr5	159597638	159598008	(21940251)	+	L2a	LINE/L2	2287	2625	(794)	3276418
1505	24.6	3.2	6.2	chr5	159598009	159598394	(21939865)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3276423
284	22.2	4.9	3.1	chr5	159938996	159939123	(21599136)	C	MIR3	SINE/MIR	(8)	200	77	3277017
24	0.0	0.0	0.0	chr5	159939253	159939278	(21598981)	+	(GA)n	Simple_repeat	1	26	(0)	3277018
53	0.0	0.0	0.0	chr5	159939279	159939323	(21598936)	+	(GT)n	Simple_repeat	1	45	(0)	3277019
73	1.5	0.0	0.0	chr5	160045455	160045521	(21492738)	+	(CA)n	Simple_repeat	1	67	(0)	3277258
37	9.4	1.7	1.7	chr5	160045522	160045576	(21492683)	+	(CT)n	Simple_repeat	2	57	(0)	3277259
489	15.9	0.0	0.0	chr5	160045668	160045730	(21492529)	C	AluJr	SINE/Alu	(120)	192	130	3277260
2516	10.4	0.0	0.0	chr5	160045731	160046039	(21492220)	C	AluSx4	SINE/Alu	(0)	310	2	3277261
61	3.4	0.0	0.0	chr5	160197922	160197982	(21340277)	+	(GT)n	Simple_repeat	1	61	(0)	3277630
27	25.1	5.5	3.6	chr5	160197983	160198009	(21340250)	+	GA-rich	Low_complexity	1	55	(70)	3277631
19	14.8	0.0	9.4	chr5	160198010	160198073	(21340186)	+	G-rich	Low_complexity	1	64	(0)	3277632
27	25.1	5.5	3.6	chr5	160198074	160198105	(21340154)	+	GA-rich	Low_complexity	56	125	(0)	3277631
34	18.3	4.0	0.0	chr5	160240734	160240808	(21297451)	+	GA-rich	Low_complexity	1	78	(0)	3277761
2060	10.9	3.4	0.3	chr5	160240864	160241147	(21297112)	C	AluSc5	SINE/Alu	(16)	293	1	3277762
2974	12.7	6.9	8.6	chr5	160526692	160526872	(21011387)	+	LTR18B	LTR/ERVL	24	198	(416)	3278337
53	0.0	0.0	0.0	chr5	160526873	160526917	(21011342)	+	(GA)n	Simple_repeat	1	45	(0)	3278338
2974	12.7	6.9	8.6	chr5	160526918	160527337	(21010922)	+	LTR18B	LTR/ERVL	199	614	(0)	3278337
640	23.9	22.4	0.7	chr5	168794642	168795097	(12743162)	+	L2a	LINE/L2	2844	3426	(0)	3290758
36	0.0	0.0	0.0	chr5	169137306	169137336	(12400923)	+	(AC)n	Simple_repeat	1	31	(0)	3291311
18	0.0	0.0	0.0	chr5	169137337	169137356	(12400903)	+	(GA)n	Simple_repeat	1	20	(0)	3291312
1876	14.2	11.0	11.0	chr5	169735754	169736180	(11802079)	C	MSTA	LTR/ERVL-MaLR	(1)	427	1	3292276
20	33.4	1.1	3.2	chr5	170062002	170062094	(11476165)	+	(TG)n	Simple_repeat	1	94	(0)	3292910
34	0.0	0.0	0.0	chr5	170062101	170062129	(11476130)	+	(GT)n	Simple_repeat	1	29	(0)	3292911
22	6.2	0.0	0.0	chr5	170062130	170062161	(11476098)	+	(GAGA)n	Simple_repeat	3	34	(0)	3292912
292	36.5	5.8	3.1	chr5	170062288	170062604	(11475655)	+	L1M3d	LINE/L1	8	333	(5558)	3292913
2491	7.8	0.7	0.0	chr5	171372485	171372793	(10165466)	C	AluSp	SINE/Alu	(2)	311	1	3295132
37	7.2	0.0	0.0	chr5	171372896	171372940	(10165319)	+	(TC)n	Simple_repeat	1	45	(0)	3295133
24	0.0	0.0	0.0	chr5	171372941	171372966	(10165293)	+	(GT)n	Simple_repeat	1	26	(0)	3295134
16	14.7	3.3	0.0	chr5	171373117	171373146	(10165113)	+	(AC)n	Simple_repeat	1	31	(0)	3295135
48	0.0	0.0	0.0	chr5	171449361	171449401	(10088858)	+	(GT)n	Simple_repeat	1	41	(0)	3295308
34	2.4	2.4	0.0	chr5	171449402	171449443	(10088816)	+	(AG)n	Simple_repeat	1	43	(0)	3295309
72	26.0	6.0	3.0	chr5	171493990	171494339	(10043920)	+	(CA)n	Simple_repeat	1	371	(0)	3295421
215	22.9	2.0	0.0	chr5	171494433	171494480	(10043779)	C	L2b	LINE/L2	(17)	3358	3310	3295422
2250	10.9	1.0	1.3	chr5	172162059	172162371	(9375888)	+	AluSx1	SINE/Alu	1	312	(0)	3296832
17	15.3	0.0	0.0	chr5	172162418	172162451	(9375808)	+	(CT)n	Simple_repeat	1	34	(0)	3296833
22	18.0	2.6	6.2	chr5	173056577	173056654	(8481605)	+	G-rich	Low_complexity	1	80	(0)	3298842
23	22.7	3.1	5.0	chr5	173056875	173056970	(8481289)	+	G-rich	Low_complexity	1	99	(0)	3298843
18	13.5	3.0	0.0	chr5	173283426	173283458	(8254801)	+	GA-rich	Low_complexity	1	34	(0)	3299339
44	2.4	0.0	0.0	chr5	173283473	173283514	(8254745)	+	(GA)n	Simple_repeat	1	42	(0)	3299340
2404	23.2	2.4	4.3	chr5	173454483	173455036	(8083223)	+	MLT1F1	LTR/ERVL-MaLR	27	569	(0)	3299634
250	29.4	0.0	0.0	chr5	173664064	173664131	(7874128)	+	MIR1_Amn	SINE/MIR	73	140	(90)	3300011
898	27.3	8.4	3.1	chr5	173671478	173672022	(7866237)	C	L2a	LINE/L2	(85)	3290	2717	3300024
42	0.0	0.0	0.0	chr5	173719545	173719580	(7818679)	+	(TG)n	Simple_repeat	1	36	(0)	3300131
43	2.5	0.0	0.0	chr5	173719583	173719623	(7818636)	+	(AG)n	Simple_repeat	1	41	(0)	3300132
21	18.1	0.0	4.2	chr5	173770690	173770737	(7767522)	+	(TG)n	Simple_repeat	1	48	(0)	3300253
78	8.0	6.8	0.0	chr5	173770737	173770869	(7767390)	+	(GA)n	Simple_repeat	1	142	(0)	3300254
560	25.6	6.4	1.8	chr5	173770927	173771089	(7767170)	+	L2c	LINE/L2	3215	3385	(2)	3300248
541	35.3	9.5	4.7	chr5	173859654	173860237	(7678022)	C	L2a	LINE/L2	(0)	3426	2798	3300457
50	0.0	0.0	0.0	chr5	173860238	173860280	(7677979)	+	(TC)n	Simple_repeat	1	43	(0)	3300458
388	35.3	7.3	7.0	chr5	173860281	173860625	(7677634)	C	L2a	LINE/L2	(622)	2797	2465	3300457
47	0.0	0.0	0.0	chr5	173892998	173893037	(7645222)	+	(TG)n	Simple_repeat	1	40	(0)	3300523
16	0.0	0.0	0.0	chr5	173893038	173893055	(7645204)	+	(AG)n	Simple_repeat	1	18	(0)	3300524
50	0.0	0.0	0.0	chr5	174258073	174258115	(7280144)	+	(CA)n	Simple_repeat	1	43	(0)	3301168
27	0.0	0.0	0.0	chr5	174258116	174258145	(7280114)	+	(TC)n	Simple_repeat	1	30	(0)	3301169
45	2.4	0.0	0.0	chr5	175093515	175093557	(6444702)	+	(AG)n	Simple_repeat	1	43	(0)	3302798
1604	18.6	8.8	3.8	chr5	175093618	175093963	(6444296)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3302799
1301	30.1	8.6	2.3	chr5	175275810	175275947	(6262312)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	443	3303144
43	4.5	0.0	0.0	chr5	175275948	175275993	(6262266)	+	(TC)n	Simple_repeat	1	46	(0)	3303145
478	26.1	2.6	0.0	chr5	175275997	175276107	(6262152)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	3303146
1301	30.1	8.6	2.3	chr5	175276108	175276521	(6261738)	C	MLT1K	LTR/ERVL-MaLR	(165)	430	3	3303144
22	25.0	4.1	1.3	chr5	175657933	175658005	(5880254)	+	GA-rich	Low_complexity	1	76	(0)	3303858
95	2.2	1.1	0.0	chr5	175871394	175871486	(5666773)	+	(GA)n	Simple_repeat	1	94	(0)	3304315
16	5.2	0.0	0.0	chr5	176396607	176396626	(5141633)	+	(AG)n	Simple_repeat	1	20	(0)	3305163
221	28.1	3.0	9.2	chr5	176396740	176396880	(5141379)	+	L2b	LINE/L2	2804	2935	(484)	3305164
71	6.9	1.1	0.0	chr5	176834666	176834756	(4703503)	+	(TC)n	Simple_repeat	1	92	(0)	3306086
30	0.0	0.0	0.0	chr5	178249684	178249716	(3288543)	+	(AC)n	Simple_repeat	1	33	(0)	3308865
41	0.0	0.0	0.0	chr5	178249717	178249751	(3288508)	+	(CT)n	Simple_repeat	1	35	(0)	3308866
180	38.6	0.0	0.0	chr5	178249795	178249851	(3288408)	C	MIR	SINE/MIR	(26)	236	180	3308867
243	27.5	13.0	0.0	chr5	178249856	178249935	(3288324)	C	MIR	SINE/MIR	(151)	111	20	3308867
14	0.0	4.8	0.0	chr5	179805715	179805735	(1732524)	+	(GCAG)n	Simple_repeat	1	22	(0)	3311610
13	20.7	3.6	5.2	chr5	180071333	180071388	(1466871)	+	(GGCCGG)n	Simple_repeat	1	58	(0)	3312025
870	14.4	0.8	0.0	chr5	180085170	180085301	(1452958)	C	FLAM_C	SINE/Alu	(10)	133	1	3312055
15	20.0	0.0	5.9	chr5	180292171	180292221	(1246038)	+	G-rich	Low_complexity	1	51	(0)	3312366
15	29.6	2.0	0.0	chr5	180809785	180809833	(728426)	+	(AC)n	Simple_repeat	1	50	(0)	3313277
49	6.5	0.0	0.0	chr5	181046665	181046728	(491531)	+	(GA)n	Simple_repeat	1	64	(0)	3313562
915	23.7	9.8	6.2	chr5	181105452	181105775	(432484)	C	MER58B	DNA/hAT-Charlie	(0)	341	5	3313653
888	17.6	0.7	0.0	chr5	181163880	181164021	(374238)	C	FRAM	SINE/Alu	(7)	169	27	3313756
41	31.6	3.0	0.0	chr6	235979	236147	(170569832)	+	(TCCCTC)n	Simple_repeat	1	174	(0)	3314567
3141	15.7	9.8	1.9	chr6	848918	849509	(169956470)	C	MER73	LTR/ERVL	(0)	644	1	3315313
864	22.8	3.0	1.6	chr6	885747	885947	(169920032)	C	MLT1A	LTR/ERVL-MaLR	(17)	391	173	3315346
48	0.0	0.0	0.0	chr6	885948	885988	(169919991)	+	(GT)n	Simple_repeat	1	41	(0)	3315347
754	19.0	7.6	2.6	chr6	885989	886190	(169919789)	C	MLT1A	LTR/ERVL-MaLR	(210)	198	4	3315346
13	9.6	12.8	1.9	chr6	1703239	1703285	(169102694)	+	(CTCTCTGC)n	Simple_repeat	1	53	(0)	3316487
32	0.0	3.2	0.0	chr6	2141866	2141896	(168664083)	+	(CT)n	Simple_repeat	1	32	(0)	3317001
187	26.3	2.5	1.6	chr6	2468021	2468616	(168337363)	+	GA-rich	Low_complexity	1	611	(0)	3317480
1983	13.6	5.1	15.9	chr6	2663119	2663601	(168142378)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3317748
550	24.3	15.7	0.0	chr6	2755274	2755450	(168050529)	C	L1MC4	LINE/L1	(36)	8006	7797	3317871
240	30.3	0.0	0.0	chr6	2755450	2755515	(168050464)	C	L1MC4	LINE/L1	(229)	7653	7588	3317871
1259	16.4	1.5	0.0	chr6	2755535	2755735	(168050244)	C	AluJb	SINE/Alu	(5)	307	104	3317872
2266	8.7	1.0	0.0	chr6	2942450	2942736	(167863243)	+	AluSq2	SINE/Alu	1	290	(23)	3318141
461	21.1	6.6	15.0	chr6	2942737	2942864	(167863115)	C	MER44A	DNA/TcMar-Tigger	(211)	128	1	3318138
2091	16.2	6.5	5.6	chr6	2942885	2943328	(167862651)	+	MER83	LTR/ERV1	1	448	(0)	3318142
314	34.1	0.0	7.9	chr6	2990481	2990620	(167815359)	+	L2b	LINE/L2	3244	3372	(3)	3318213
3903	10.6	2.7	0.5	chr6	2990658	2991209	(167814770)	+	LTR6A	LTR/ERV1	1	564	(0)	3318214
2440	15.5	1.6	7.1	chr6	3035379	3035829	(167770150)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3318301
15	27.1	4.5	0.0	chr6	3068925	3068990	(167736989)	+	G-rich	Low_complexity	1	69	(0)	3318348
2249	9.2	0.7	0.0	chr6	3164097	3164380	(167641599)	C	AluSx1	SINE/Alu	(22)	290	5	3318500
307	35.3	5.0	2.1	chr6	3164403	3164691	(167641288)	C	Tigger16a	DNA/TcMar-Tigger	(603)	354	57	3318501
33	0.0	0.0	0.0	chr6	3208682	3208709	(167597270)	+	(AG)n	Simple_repeat	1	28	(0)	3318574
208	28.7	12.2	5.0	chr6	3208830	3208950	(167597029)	C	L2	LINE/L2	(522)	2897	2767	3318575
13	21.5	3.4	4.9	chr6	3228858	3228916	(167577063)	+	(GCACGC)n	Simple_repeat	1	61	(0)	3318606
16	0.0	0.0	0.0	chr6	3229004	3229021	(167576958)	+	(GT)n	Simple_repeat	1	18	(0)	3318607
32	3.2	0.0	0.0	chr6	3229022	3229053	(167576926)	+	(GA)n	Simple_repeat	1	32	(0)	3318608
29	0.0	0.0	2.9	chr6	3511327	3511361	(167294618)	+	(TG)n	Simple_repeat	1	35	(0)	3319017
40	10.5	0.0	0.0	chr6	3511361	3511422	(167294557)	+	(GAGAGA)n	Simple_repeat	1	62	(0)	3319018
196	25.6	0.0	0.0	chr6	4018919	4018961	(166787018)	+	L2b	LINE/L2	3332	3374	(1)	3319820
2020	15.9	11.7	1.6	chr6	4100684	4101067	(166704912)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3319964
718	34.6	7.3	5.4	chr6	4126265	4126802	(166679177)	C	L2b	LINE/L2	(2)	3373	2838	3320006
2205	23.6	5.4	11.6	chr6	4153358	4153756	(166652223)	C	L1MEf	LINE/L1	(5811)	736	352	3320042
1354	18.2	11.0	8.2	chr6	4505199	4505576	(166300403)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	3320559
2280	10.1	4.2	4.0	chr6	4678556	4678935	(166127044)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3320852
705	24.5	20.0	1.5	chr6	4687529	4688159	(166117820)	+	L1MEh	LINE/L1	874	1585	(650)	3320864
1020	27.7	13.2	5.5	chr6	4688158	4688826	(166117153)	+	L1MEh	LINE/L1	1780	2507	(0)	3320864
2442	25.2	12.9	4.9	chr6	4793440	4794658	(166011321)	C	L2a	LINE/L2	(421)	2998	1668	3321078
866	26.5	12.7	3.5	chr6	4794698	4795347	(166010632)	C	L1M5	LINE/L1	(1665)	4481	3764	3321076
55	0.0	0.0	0.0	chr6	4819117	4819163	(165986816)	+	(TC)n	Simple_repeat	1	47	(0)	3321108
18	0.0	0.0	0.0	chr6	4819164	4819183	(165986796)	+	(GT)n	Simple_repeat	1	20	(0)	3321109
34	15.3	1.5	0.0	chr6	5162474	5162538	(165643441)	+	GA-rich	Low_complexity	1	66	(0)	3321623
1422	16.1	6.8	14.6	chr6	6635183	6635552	(164170427)	C	MER44A	DNA/TcMar-Tigger	(0)	339	1	3323679
67	24.6	2.2	1.1	chr6	6800403	6800587	(164005392)	+	(TC)n	Simple_repeat	1	189	(0)	3323936
53	0.0	0.0	0.0	chr6	6800590	6800634	(164005345)	+	(CA)n	Simple_repeat	1	45	(0)	3323937
52	22.1	3.5	1.4	chr6	6834596	6834747	(163971232)	+	(TC)n	Simple_repeat	1	155	(0)	3324004
13	34.0	1.2	3.7	chr6	6834691	6834771	(163971208)	+	(CCTC)n	Simple_repeat	1	82	(0)	3324005
383	31.6	4.8	1.2	chr6	6834773	6834932	(163971047)	C	MLT1O	LTR/ERVL-MaLR	(345)	197	32	3324006
914	30.8	7.8	0.6	chr6	6834949	6835281	(163970698)	C	LTR16C	LTR/ERVL	(2)	487	129	3324007
491	29.0	16.3	4.1	chr6	6906096	6906458	(163899521)	+	LTR33	LTR/ERVL	42	457	(58)	3324182
34	2.8	0.0	0.0	chr6	7107674	7107709	(163698270)	+	(CGC)n	Simple_repeat	1	36	(0)	3324624
18	12.1	0.0	0.0	chr6	7145967	7145994	(163659985)	+	(CT)n	Simple_repeat	1	28	(0)	3324678
21	7.5	0.0	0.0	chr6	7146101	7146128	(163659851)	+	(AC)n	Simple_repeat	1	28	(0)	3324679
18	13.2	3.0	0.0	chr6	7199621	7199653	(163606326)	+	(TG)n	Simple_repeat	1	34	(0)	3324755
1124	13.8	0.0	0.0	chr6	7199658	7199842	(163606137)	C	AluJr	SINE/Alu	(0)	312	122	3324756
23	8.7	2.6	0.0	chr6	10399884	10399896	(160406083)	+	(TG)n	Simple_repeat	1	14	(0)	3329441
29	0.0	0.0	0.0	chr6	10399897	10399921	(160406058)	+	(TC)n	Simple_repeat	1	25	(0)	3329442
23	8.7	2.6	0.0	chr6	10399922	10399945	(160406034)	+	(TG)n	Simple_repeat	1	24	(0)	3329443
413	29.6	1.7	1.7	chr6	11729672	11729788	(159076191)	+	MER5B	DNA/hAT-Charlie	3	119	(59)	3331657
31	0.0	0.0	0.0	chr6	11745171	11745197	(159060782)	+	(TC)n	Simple_repeat	1	27	(0)	3331672
19	8.1	0.0	0.0	chr6	11745198	11745223	(159060756)	+	(GT)n	Simple_repeat	1	26	(0)	3331673
28	14.4	0.0	0.0	chr6	11929425	11929470	(158876509)	+	(CA)n	Simple_repeat	1	46	(0)	3331928
30	7.8	0.0	0.0	chr6	11929470	11929510	(158876469)	+	(AG)n	Simple_repeat	1	41	(0)	3331929
38	13.5	0.0	1.5	chr6	12287623	12287648	(158518331)	+	(AC)n	Simple_repeat	1	25	(0)	3332452
53	3.1	4.6	0.0	chr6	12287649	12287713	(158518266)	+	(TC)n	Simple_repeat	1	68	(0)	3332453
38	13.5	0.0	1.5	chr6	12287714	12287754	(158518225)	+	(AC)n	Simple_repeat	2	42	(0)	3332454
16	0.0	0.0	0.0	chr6	12287756	12287773	(158518206)	+	(GC)n	Simple_repeat	1	18	(0)	3332455
942	24.0	7.4	7.4	chr6	13094860	13095224	(157710755)	+	MLT1A	LTR/ERVL-MaLR	4	368	(6)	3333693
16	29.1	1.4	2.7	chr6	13629763	13629836	(157176143)	+	A-rich	Low_complexity	1	75	(0)	3334606
39	4.6	0.0	2.1	chr6	13629875	13629921	(157176058)	+	(TC)n	Simple_repeat	1	47	(0)	3334607
20	0.0	0.0	0.0	chr6	13629922	13629943	(157176036)	+	(GT)n	Simple_repeat	1	22	(0)	3334608
2209	12.9	3.3	2.8	chr6	13876801	13876876	(156929103)	C	Tigger3c	DNA/TcMar-Tigger	(233)	369	299	3335076
2533	15.3	3.5	0.2	chr6	13876877	13877288	(156928691)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3335077
2650	21.6	0.6	5.1	chr6	14011568	14011601	(156794378)	C	MLT2B3	LTR/ERVL	(6)	548	516	3335297
53	0.0	0.0	0.0	chr6	14011602	14011646	(156794333)	+	(AC)n	Simple_repeat	1	45	(0)	3335298
2650	21.6	0.6	5.1	chr6	14011647	14011816	(156794163)	C	MLT2B3	LTR/ERVL	(39)	515	355	3335297
2159	14.1	2.7	4.3	chr6	14011817	14012186	(156793793)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3335299
35	0.0	5.4	0.0	chr6	14037161	14037197	(156768782)	+	(TC)n	Simple_repeat	1	39	(0)	3335335
47	0.0	0.0	0.0	chr6	14066629	14066668	(156739311)	+	(TG)n	Simple_repeat	1	40	(0)	3335393
31	7.6	0.0	0.0	chr6	14066669	14066710	(156739269)	+	(AG)n	Simple_repeat	1	42	(0)	3335394
362	25.5	13.0	3.4	chr6	14454675	14454820	(156351159)	+	LTR16A2	LTR/ERVL	334	495	(0)	3336029
1959	19.6	3.5	4.9	chr6	14502461	14502927	(156303052)	+	MER88	LTR/ERVL	1	460	(4)	3336100
35	0.0	0.0	0.0	chr6	14545200	14545229	(156260750)	+	(GA)n	Simple_repeat	1	30	(0)	3336165
341	27.2	10.9	0.0	chr6	14742696	14742809	(156063170)	+	MLT1L	LTR/ERVL-MaLR	141	268	(342)	3336480
16	9.3	0.0	0.0	chr6	14797374	14797396	(156008583)	+	(A)n	Simple_repeat	1	23	(0)	3336564
20	19.9	2.1	0.0	chr6	14876684	14876714	(155929265)	+	(TC)n	Simple_repeat	1	32	(0)	3336695
943	13.1	0.8	0.0	chr6	14876715	14876844	(155929135)	C	FLAM_C	SINE/Alu	(11)	132	2	3336696
30	7.3	0.8	0.0	chr6	14876845	14876891	(155929088)	+	(TC)n	Simple_repeat	1	47	(0)	3336697
27	2.3	9.1	0.0	chr6	15058025	15058068	(155747911)	+	(AAAC)n	Simple_repeat	1	48	(0)	3337116
1129	11.5	0.0	1.7	chr6	15058077	15058253	(155747726)	C	Tigger1	DNA/TcMar-Tigger	(2190)	228	55	3337105
18	0.0	0.0	0.0	chr6	15058261	15058280	(155747699)	+	(AG)n	Simple_repeat	1	20	(0)	3337117
253	12.2	0.0	10.9	chr6	15058282	15058336	(155747643)	C	Tigger1	DNA/TcMar-Tigger	(2369)	49	1	3337105
248	29.9	1.3	1.3	chr6	15058337	15058414	(155747565)	C	Charlie19a	DNA/hAT-Charlie	(307)	79	2	3337104
902	20.9	1.8	8.0	chr6	15058754	15058992	(155746987)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	151	3337118
732	17.9	0.0	5.4	chr6	15058999	15059146	(155746833)	C	L1PA17	LINE/L1	(22)	6144	6005	3337119
17	12.7	0.0	0.0	chr6	15107037	15107062	(155698917)	+	(TC)n	Simple_repeat	1	26	(0)	3337250
1569	20.0	4.5	0.3	chr6	15111467	15111761	(155694218)	+	AluJb	SINE/Alu	5	312	(0)	3337258
25	20.6	0.0	3.0	chr6	15111762	15111792	(155694187)	+	GA-rich	Low_complexity	1	31	(0)	3337259
71	0.0	0.0	0.0	chr6	15111793	15111855	(155694124)	+	(AGGA)n	Simple_repeat	1	63	(0)	3337260
25	20.6	0.0	3.0	chr6	15111856	15111874	(155694105)	+	GA-rich	Low_complexity	32	48	(0)	3337261
790	17.3	0.8	0.8	chr6	15111875	15112007	(155693972)	+	FLAM_C	SINE/Alu	1	133	(10)	3337262
25	20.6	0.0	3.0	chr6	15112008	15112022	(155693957)	+	GA-rich	Low_complexity	49	63	(0)	3337263
36	2.9	0.0	0.0	chr6	15264607	15264641	(155541338)	+	(GT)n	Simple_repeat	1	35	(0)	3337690
24	3.5	0.0	0.0	chr6	15264642	15264670	(155541309)	+	(AG)n	Simple_repeat	1	29	(0)	3337691
47	0.0	0.0	0.0	chr6	15300684	15300723	(155505256)	+	(TG)n	Simple_repeat	1	40	(0)	3337756
30	14.8	1.9	0.0	chr6	15300724	15300776	(155505203)	+	GA-rich	Low_complexity	1	54	(0)	3337757
36	0.0	0.0	0.0	chr6	15320853	15320883	(155485096)	+	(TG)n	Simple_repeat	1	31	(0)	3337781
293	31.7	0.3	0.6	chr6	15386141	15386252	(155419727)	C	MIR	SINE/MIR	(156)	112	2	3337875
16	25.5	2.5	0.0	chr6	15386260	15386299	(155419680)	+	(TC)n	Simple_repeat	1	41	(0)	3337883
20	7.8	0.0	0.0	chr6	15386305	15386331	(155419648)	+	(TG)n	Simple_repeat	1	27	(0)	3337884
4059	11.9	3.6	2.2	chr6	15555300	15555924	(155250055)	+	MER41B	LTR/ERV1	1	634	(0)	3338068
2995	16.0	12.0	6.9	chr6	15555925	15556183	(155249796)	+	MER41-int	LTR/ERV1	1	301	(5645)	3338068
2898	16.0	12.0	6.9	chr6	15556480	15556912	(155249067)	+	MER41-int	LTR/ERV1	302	732	(5214)	3338068
8763	12.8	4.7	2.2	chr6	15556909	15558273	(155247706)	+	MER41-int	LTR/ERV1	3025	4435	(1511)	3338068
829	27.8	14.4	3.4	chr6	15677709	15677976	(155128003)	+	MLT1H1	LTR/ERVL-MaLR	1	271	(284)	3338241
29	0.0	0.0	0.0	chr6	15677977	15678001	(155127978)	+	(GA)n	Simple_repeat	1	25	(0)	3338242
829	26.4	15.3	3.5	chr6	15678002	15678232	(155127747)	+	MLT1H1	LTR/ERVL-MaLR	272	554	(1)	3338241
43	0.0	0.0	0.0	chr6	15728933	15728969	(155077010)	+	(AG)n	Simple_repeat	1	37	(0)	3338343
298	29.1	9.9	0.8	chr6	15729029	15729156	(155076823)	C	MIR3	SINE/MIR	(4)	204	64	3338344
358	25.6	4.4	0.0	chr6	15813566	15813651	(154992328)	C	MER63D	DNA/hAT-Blackjack	(969)	92	3	3338487
1329	12.4	9.2	0.9	chr6	15813722	15813941	(154992038)	C	MSTA	LTR/ERVL-MaLR	(0)	428	189	3338488
2057	11.8	0.4	0.7	chr6	15813942	15814248	(154991731)	C	AluSg7	SINE/Alu	(0)	309	1	3338489
16	7.8	3.5	3.3	chr6	15888580	15888608	(154917371)	+	(TC)n	Simple_repeat	1	30	(0)	3338618
4557	11.2	0.6	0.6	chr6	15895642	15896271	(154909708)	C	MER41B	LTR/ERV1	(2)	632	3	3338638
3945	13.5	3.6	6.5	chr6	15904250	15904961	(154901018)	C	LTR8	LTR/ERV1	(0)	691	1	3338657
324	25.4	1.6	6.7	chr6	15905052	15905114	(154900865)	+	L1ME4b	LINE/L1	710	772	(120)	3338658
23	9.7	0.0	0.0	chr6	15962366	15962398	(154843581)	+	(AG)n	Simple_repeat	1	33	(0)	3338764
15	9.7	0.0	0.0	chr6	15962444	15962465	(154843514)	+	(GA)n	Simple_repeat	1	22	(0)	3338765
46	2.3	0.0	0.0	chr6	15962466	15962509	(154843470)	+	(GT)n	Simple_repeat	1	44	(0)	3338766
18	0.0	0.0	4.3	chr6	16005125	16005147	(154800832)	+	(GA)n	Simple_repeat	1	23	(0)	3338837
16	20.2	0.0	4.1	chr6	16129126	16129174	(154676805)	+	G-rich	Low_complexity	1	49	(0)	3339045
2133	13.9	0.7	0.0	chr6	16214180	16214489	(154591490)	C	AluSx1	SINE/Alu	(0)	312	1	3339168
1060	16.1	0.5	11.1	chr6	16214490	16214666	(154591313)	C	LTR8	LTR/ERV1	(522)	169	1	3339167
452	27.8	12.2	2.4	chr6	16214672	16214832	(154591147)	+	Charlie2b	DNA/hAT-Charlie	2457	2647	(135)	3339169
3387	14.0	11.9	1.6	chr6	16265461	16266134	(154539845)	+	LTR12	LTR/ERV1	1	753	(73)	3339250
1123	18.7	2.8	11.2	chr6	16266133	16266520	(154539459)	+	LTR12	LTR/ERV1	349	610	(78)	3339250
27	6.0	0.0	0.0	chr6	16367328	16367362	(154438617)	+	(TC)n	Simple_repeat	1	35	(0)	3339412
36	5.2	0.0	0.0	chr6	16367363	16367402	(154438577)	+	(CA)n	Simple_repeat	1	40	(0)	3339413
355	30.2	6.8	4.2	chr6	16434684	16434897	(154371082)	C	L2a	LINE/L2	(5)	3421	3202	3339520
935	31.8	5.2	2.6	chr6	16434938	16435586	(154370393)	C	L2a	LINE/L2	(711)	2708	2042	3339520
37	2.9	0.0	0.0	chr6	16902695	16902730	(153903249)	+	(AG)n	Simple_repeat	1	36	(0)	3340225
24	0.0	0.0	0.0	chr6	16902731	16902757	(153903222)	+	(TG)n	Simple_repeat	1	27	(0)	3340226
904	13.1	0.0	0.0	chr6	17821038	17821159	(152984820)	C	AluJr	SINE/Alu	(189)	123	2	3341873
787	26.3	2.5	3.4	chr6	17869389	17869632	(152936347)	C	MIR	SINE/MIR	(29)	233	7	3341971
16	8.7	4.0	0.0	chr6	17962733	17962757	(152843222)	+	(CT)n	Simple_repeat	1	26	(0)	3342142
2767	17.4	4.2	0.4	chr6	18326996	18327474	(152478505)	C	MER54B	LTR/ERVL	(0)	793	296	3342880
65	9.7	2.0	0.0	chr6	18327475	18327576	(152478403)	+	(AGAG)n	Simple_repeat	1	104	(0)	3342881
1080	19.8	0.5	0.5	chr6	18327577	18327779	(152478200)	C	MER54B	LTR/ERVL	(490)	303	101	3342880
16	5.3	0.0	0.0	chr6	18749553	18749572	(152056407)	+	(GC)n	Simple_repeat	1	20	(0)	3343525
50	1.7	0.0	0.0	chr6	18749572	18749607	(152056372)	+	(CA)n	Simple_repeat	1	36	(0)	3343526
51	3.9	0.0	0.0	chr6	18749608	18749660	(152056319)	+	(CT)n	Simple_repeat	1	53	(0)	3343527
50	1.7	0.0	0.0	chr6	18749661	18749683	(152056296)	+	(CA)n	Simple_repeat	1	23	(0)	3343528
33	0.0	0.0	0.0	chr6	20027756	20027783	(150778196)	+	(CT)n	Simple_repeat	1	28	(0)	3345283
37	0.0	0.0	0.0	chr6	20055265	20055296	(150750683)	+	(TG)n	Simple_repeat	1	32	(0)	3345328
23	0.0	0.0	0.0	chr6	20055297	20055321	(150750658)	+	(AG)n	Simple_repeat	1	25	(0)	3345329
989	16.6	0.0	0.6	chr6	20055442	20055598	(150750381)	+	AluJb	SINE/Alu	155	310	(2)	3345330
24	0.0	0.0	0.0	chr6	20369944	20369970	(150436009)	+	(CT)n	Simple_repeat	1	27	(0)	3345914
46	0.0	0.0	0.0	chr6	20369971	20370009	(150435970)	+	(TG)n	Simple_repeat	1	39	(0)	3345915
1357	21.5	4.9	2.6	chr6	20508340	20508634	(150297345)	+	MLT2D	LTR/ERVL	68	372	(42)	3346167
40	2.4	2.4	0.0	chr6	20508635	20508676	(150297303)	+	(CA)n	Simple_repeat	1	43	(0)	3346168
1357	21.5	4.9	2.6	chr6	20508677	20508719	(150297260)	+	MLT2D	LTR/ERVL	373	414	(0)	3346167
613	20.5	3.5	12.9	chr6	20810101	20810324	(149995655)	C	L1MC5	LINE/L1	(5)	9299	9098	3346653
279	15.8	0.0	0.0	chr6	20810329	20810376	(149995603)	+	FLAM_C	SINE/Alu	70	117	(185)	3346654
62	0.0	0.0	0.0	chr6	20810393	20810445	(149995534)	+	(CA)n	Simple_repeat	1	53	(0)	3346655
926	13.8	0.0	2.2	chr6	20810470	20810607	(149995372)	+	FRAM	SINE/Alu	20	154	(22)	3346656
18	4.8	0.0	0.0	chr6	21594120	21594141	(149211838)	+	(A)n	Simple_repeat	1	22	(0)	3347914
21	7.5	0.0	0.0	chr6	21594265	21594292	(149211687)	+	(GA)n	Simple_repeat	1	28	(0)	3347915
4361	10.9	1.6	0.5	chr6	24756192	24756815	(146049164)	C	MER41B	LTR/ERV1	(0)	634	4	3352489
242	36.2	5.0	9.2	chr6	24756816	24756900	(146049079)	C	L3	LINE/CR1	(1506)	2593	2522	3352486
26	0.0	0.0	0.0	chr6	24756901	24756925	(146049054)	+	(T)n	Simple_repeat	1	25	(0)	3352490
2164	10.5	0.0	0.0	chr6	24756935	24757211	(146048768)	C	AluSx1	SINE/Alu	(35)	277	1	3352491
10523	4.8	0.6	6.5	chr6	25585548	25587018	(145218961)	C	SVA_B	Retroposon/SVA	(0)	1383	1	3353827
25	4.5	3.9	5.6	chr6	25587019	25587070	(145218909)	+	(GGAGAG)n	Simple_repeat	1	54	(0)	3353828
608	29.6	2.6	10.0	chr6	25835530	25835818	(144970161)	C	LTR16A2	LTR/ERVL	(14)	481	215	3354181
1937	16.4	11.3	7.1	chr6	25835820	25835888	(144970091)	C	LTR46	LTR/ERV1	(0)	460	407	3354182
36	0.0	0.0	0.0	chr6	25835889	25835919	(144970060)	+	(AG)n	Simple_repeat	1	31	(0)	3354183
1937	16.4	11.3	7.1	chr6	25835920	25836288	(144969691)	C	LTR46	LTR/ERV1	(54)	406	1	3354182
37	0.0	0.0	0.0	chr6	25940245	25940276	(144865703)	+	(TG)n	Simple_repeat	1	32	(0)	3354345
20	3.6	0.0	6.2	chr6	25940277	25940308	(144865671)	+	(AG)n	Simple_repeat	1	32	(0)	3354346
34	3.0	0.0	0.0	chr6	25946779	25946812	(144859167)	+	(GA)n	Simple_repeat	1	34	(0)	3354358
2046	17.1	0.3	1.0	chr6	25946884	25947188	(144858791)	+	AluJb	SINE/Alu	1	303	(9)	3354359
566	26.2	5.8	1.4	chr6	26140845	26140991	(144664988)	+	MER63B	DNA/hAT-Blackjack	282	435	(1)	3354701
14	13.2	2.9	2.8	chr6	26156401	26156435	(144649544)	+	(CTGCCC)n	Simple_repeat	1	36	(0)	3354734
2411	5.8	0.3	0.3	chr6	26172204	26172497	(144633482)	+	AluSc8	SINE/Alu	1	294	(17)	3354760
1477	15.7	7.1	0.0	chr6	26215900	26216148	(144589831)	C	AluSq2	SINE/Alu	(22)	291	24	3354842
210	31.3	0.0	4.8	chr6	26305006	26305109	(144500870)	C	MER5B	DNA/hAT-Charlie	(63)	115	17	3354980
664	1.4	0.0	0.0	chr6	26322818	26322890	(144483089)	+	tRNA-Arg-CGA	tRNA	1	73	(3)	3355024
443	24.1	3.3	12.6	chr6	26323092	26323290	(144482689)	+	MER5A	DNA/hAT-Charlie	9	188	(1)	3355025
239	23.8	3.4	6.7	chr6	26342201	26342290	(144463689)	C	MIRc	SINE/MIR	(17)	251	165	3355063
23	18.0	3.2	3.1	chr6	26345192	26345254	(144460725)	+	(CCTT)n	Simple_repeat	1	65	(0)	3355070
843	11.8	0.0	0.0	chr6	26345259	26345368	(144460611)	C	AluJo	SINE/Alu	(194)	118	9	3355071
15	4.8	4.5	0.0	chr6	26350733	26350754	(144455225)	+	(GA)n	Simple_repeat	1	23	(0)	3355086
190	33.3	7.7	2.7	chr6	26350879	26350952	(144455027)	C	MamTip2	DNA/hAT-Tip100	(183)	122	45	3355087
30	11.5	0.0	2.0	chr6	26457698	26457746	(144348233)	+	(AG)n	Simple_repeat	1	49	(0)	3355268
1815	15.8	3.1	0.0	chr6	26493577	26493860	(144312119)	+	AluJb	SINE/Alu	1	293	(19)	3355340
1279	22.4	10.7	2.8	chr6	26493861	26494006	(144311973)	+	MER90	LTR/ERV1	329	529	(85)	3355339
1192	16.3	8.4	0.0	chr6	26552094	26552332	(144253647)	+	Tigger7	DNA/TcMar-Tigger	7	267	(2224)	3355452
4115	12.1	6.3	0.3	chr6	27135841	27136436	(143669543)	C	MER41B	LTR/ERV1	(0)	634	1	3356348
2174	13.0	0.7	1.3	chr6	27143066	27143365	(143662614)	+	AluSx1	SINE/Alu	1	298	(14)	3356361
50	0.0	0.0	0.0	chr6	27145296	27145338	(143660641)	+	(AC)n	Simple_repeat	1	43	(0)	3356366
747	1.2	0.0	0.0	chr6	27209849	27209931	(143596048)	+	tRNA-Ser-TCG	tRNA	1	83	(2)	3356475
23	0.0	0.0	0.0	chr6	27220114	27220138	(143585841)	+	(TG)n	Simple_repeat	1	25	(0)	3356507
40	0.0	0.0	0.0	chr6	27220139	27220172	(143585807)	+	(GA)n	Simple_repeat	1	34	(0)	3356508
1902	11.7	2.2	0.4	chr6	27220173	27220445	(143585534)	C	AluSx1	SINE/Alu	(34)	278	1	3356509
677	0.0	0.0	0.0	chr6	27237570	27237644	(143568335)	C	tRNA-Ile-ATT	tRNA	(2)	75	1	3356559
88	30.1	2.2	2.4	chr6	27500145	27500466	(143305513)	+	A-rich	Low_complexity	1	329	(0)	3357000
765	17.9	2.5	8.2	chr6	27500480	27500649	(143305330)	+	AluJb	SINE/Alu	136	295	(17)	3356999
787	26.4	2.5	1.0	chr6	27521240	27521438	(143284541)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	173	3357036
17	8.8	0.0	0.0	chr6	27521439	27521462	(143284517)	+	(AG)n	Simple_repeat	1	24	(0)	3357037
1178	23.9	8.3	8.1	chr6	27552747	27552995	(143252984)	+	L1MD2	LINE/L1	6250	6513	(244)	3357100
903	26.0	9.9	1.5	chr6	27651169	27651508	(143154471)	+	L1ME3A	LINE/L1	5643	6014	(159)	3357300
31	0.0	0.0	0.0	chr6	27651559	27651585	(143154394)	+	(GT)n	Simple_repeat	1	27	(0)	3357301
252	23.7	0.0	6.3	chr6	27651713	27651775	(143154204)	C	MLT2D	LTR/ERVL	(65)	495	437	3357302
3202	18.2	2.8	4.3	chr6	27651806	27652595	(143153384)	+	L1MB3	LINE/L1	3169	3946	(2194)	3357303
29	5.7	0.0	0.0	chr6	27669945	27669981	(143135998)	+	(TATCTGTC)n	Simple_repeat	1	37	(0)	3357337
2229	9.2	0.7	0.7	chr6	27672004	27672297	(143133682)	C	AluSz	SINE/Alu	(18)	294	1	3357340
692	6.0	0.0	0.0	chr6	27672448	27672531	(143133448)	C	tRNA-Ser-TCG	tRNA	(1)	84	1	3357341
679	0.0	0.0	0.0	chr6	27684695	27684768	(143121211)	C	tRNA-Thr-ACY_	tRNA	(3)	74	1	3357369
648	1.4	0.0	0.0	chr6	27688188	27688261	(143117718)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	3357376
16	0.0	0.0	0.0	chr6	27688596	27688612	(143117367)	+	(A)n	Simple_repeat	1	17	(0)	3357377
1257	12.4	0.0	3.2	chr6	27773567	27773752	(143032227)	+	AluJr4	SINE/Alu	100	279	(33)	3357568
184	27.0	0.0	0.0	chr6	27773841	27773877	(143032102)	+	MIR	SINE/MIR	112	148	(114)	3357569
3642	7.6	0.2	0.4	chr6	27773907	27774370	(143031609)	+	LTR2	LTR/ERV1	1	463	(0)	3357570
2957	15.9	7.6	4.3	chr6	27837035	27837666	(142968313)	C	MER51D	LTR/ERV1	(2)	655	1	3357680
626	1.4	0.0	0.0	chr6	27902908	27902978	(142903001)	C	tRNA-Gly-GGY	tRNA	(3)	71	1	3357803
1693	22.4	9.1	5.0	chr6	27966324	27966760	(142839219)	C	MLT1F2	LTR/ERVL-MaLR	(5)	555	99	3357899
5809	17.0	7.4	7.8	chr6	27966761	27968029	(142837950)	C	LTR2752	LTR/ERV1	(0)	1263	1	3357900
4156	12.3	3.7	4.3	chr6	28004323	28004837	(142801142)	+	LTR38C	LTR/ERV1	1	491	(220)	3357946
4633	10.4	2.3	1.2	chr6	28004838	28005520	(142800459)	+	LTR8	LTR/ERV1	1	691	(0)	3357947
274	28.7	11.8	6.9	chr6	28560132	28560419	(142245560)	+	L2c	LINE/L2	3083	3386	(1)	3358827
643	0.0	0.0	0.0	chr6	28758364	28758435	(142047544)	C	tRNA-Ala-GCA	tRNA	(3)	72	1	3359169
785	13.8	0.0	20.4	chr6	28764061	28764285	(142041694)	C	AluSx	SINE/Alu	(10)	302	124	3359185
588	4.3	0.0	0.0	chr6	28764387	28764455	(142041524)	+	tRNA-Phe-TTY	tRNA	1	69	(7)	3359186
391	23.3	0.0	0.0	chr6	28778766	28778838	(142027141)	C	tRNA-Ala-GCY_	tRNA	(2)	73	1	3359197
67	0.0	0.0	0.0	chr6	28778966	28779022	(142026957)	+	(CT)n	Simple_repeat	1	57	(0)	3359198
2566	5.5	0.3	0.3	chr6	28781675	28781982	(142023997)	+	AluYj4	SINE/Alu	2	309	(2)	3359204
300	24.2	4.6	10.1	chr6	28781983	28782033	(142023946)	+	HAL1ME	LINE/L1	177	226	(2239)	3359203
2387	7.2	2.3	0.0	chr6	28796196	28796488	(142009491)	+	AluSg7	SINE/Alu	2	301	(8)	3359236
40	19.5	1.2	0.0	chr6	28796489	28796572	(142009407)	+	GA-rich	Low_complexity	1	85	(0)	3359237
631	23.5	2.9	0.0	chr6	28803352	28803487	(142002492)	+	AluJo	SINE/Alu	134	273	(39)	3359251
18	0.0	0.0	0.0	chr6	28803489	28803511	(142002468)	+	(AAGC)n	Simple_repeat	1	23	(0)	3359252
47	24.6	0.7	3.5	chr6	28803519	28803658	(142002321)	+	G-rich	Low_complexity	1	141	(0)	3359253
1808	14.1	0.0	0.4	chr6	28893103	28893364	(141912615)	+	AluSz	SINE/Alu	32	292	(20)	3359401
45	21.7	1.7	2.5	chr6	28893366	28893483	(141912496)	+	GA-rich	Low_complexity	1	120	(0)	3359402
2294	8.8	1.0	0.3	chr6	28924297	28924601	(141881378)	+	AluSc	SINE/Alu	1	307	(2)	3359466
3038	10.9	0.9	3.0	chr6	29235738	29235967	(141570012)	+	MER4D	LTR/ERV1	133	355	(548)	3359907
2832	17.0	4.1	7.6	chr6	29235968	29236602	(141569377)	C	LTR9	LTR/ERV1	(0)	612	1	3359908
528	25.0	3.5	1.4	chr6	29400224	29400365	(141405614)	C	MLT1G3	LTR/ERVL-MaLR	(1)	594	450	3360063
50	2.2	0.0	0.0	chr6	29400371	29400417	(141405562)	+	(CT)n	Simple_repeat	1	47	(0)	3360064
1959	21.5	6.0	9.4	chr6	29443113	29443718	(141362261)	C	L1ME1	LINE/L1	(11)	6168	5585	3360110
2054	20.0	3.3	2.6	chr6	29972966	29973560	(140832419)	+	L1MB3	LINE/L1	4899	5491	(692)	3360902
31	0.0	0.0	0.0	chr6	29973561	29973587	(140832392)	+	(AG)n	Simple_repeat	1	27	(0)	3360903
2054	18.8	2.5	4.3	chr6	29973588	29973825	(140832154)	+	L1MB3	LINE/L1	5492	5727	(456)	3360902
326	28.0	7.8	0.8	chr6	30065955	30066073	(140739906)	C	MIRc	SINE/MIR	(2)	266	139	3361028
18	20.3	0.0	0.0	chr6	30614692	30614726	(140191253)	+	(AC)n	Simple_repeat	1	35	(0)	3361894
1405	13.4	0.8	8.6	chr6	30721887	30722155	(140083824)	+	AluJr	SINE/Alu	40	287	(25)	3362084
917	14.3	18.8	0.4	chr6	30725538	30725762	(140080217)	+	MER2	DNA/TcMar-Tigger	37	312	(33)	3362087
391	24.4	4.7	0.0	chr6	30725854	30725935	(140080044)	C	AluJb	SINE/Alu	(79)	233	148	3362088
282	21.4	6.7	4.5	chr6	30726051	30726138	(140079841)	+	MER5A	DNA/hAT-Charlie	18	107	(82)	3362089
1607	13.3	6.1	1.7	chr6	30813812	30814108	(139991871)	C	MER39	LTR/ERV1	(396)	311	1	3362297
3251	13.8	7.7	2.9	chr6	30875227	30875808	(139930171)	+	LTR9	LTR/ERV1	1	612	(0)	3362425
17	22.9	5.9	0.0	chr6	30908441	30908491	(139897488)	+	GA-rich	Low_complexity	1	54	(0)	3362483
11110	18.6	7.7	4.7	chr6	31102132	31102888	(139703091)	C	L1M1	LINE/L1	(5437)	2128	1279	3362823
820	29.4	10.5	3.8	chr6	31418239	31418396	(139387583)	C	HAL1	LINE/L1	(546)	1961	1801	3363296
288	26.0	7.1	0.0	chr6	31418416	31418519	(139387460)	C	MER5A1	DNA/hAT-Charlie	(29)	137	26	3363299
16	0.0	0.0	0.0	chr6	31418520	31418537	(139387442)	+	(GT)n	Simple_repeat	1	18	(0)	3363300
713	20.9	0.0	1.6	chr6	31418551	31418679	(139387300)	C	AluJb	SINE/Alu	(30)	282	156	3363301
1822	18.1	0.0	0.3	chr6	31532252	31532539	(139273440)	C	AluJr	SINE/Alu	(25)	287	1	3363459
14	31.5	4.2	0.0	chr6	31547178	31547249	(139258730)	+	(TTTTGT)n	Simple_repeat	1	75	(0)	3363480
2519	8.0	0.0	0.6	chr6	31555227	31555538	(139250441)	C	AluSx	SINE/Alu	(2)	310	1	3363502
2147	6.9	0.0	13.2	chr6	31555610	31555958	(139250021)	C	AluSg7	SINE/Alu	(6)	303	1	3363503
2089	13.3	0.7	0.3	chr6	31562881	31563173	(139242806)	+	AluSg	SINE/Alu	3	296	(14)	3363511
1552	16.8	1.5	4.1	chr6	31567310	31567576	(139238403)	+	AluJr4	SINE/Alu	36	296	(16)	3363522
436	30.9	10.1	12.0	chr6	31567577	31567645	(139238334)	+	L2a	LINE/L2	2721	2787	(632)	3363515
37	0.0	0.0	0.0	chr6	31567646	31567677	(139238302)	+	(AC)n	Simple_repeat	1	32	(0)	3363523
1031	30.3	9.1	3.5	chr6	31567678	31568247	(139237732)	+	L2a	LINE/L2	2788	3426	(0)	3363515
22	31.5	2.2	5.7	chr6	31575984	31576120	(139229859)	+	GA-rich	Low_complexity	1	140	(0)	3363536
247	18.9	0.0	3.6	chr6	31576121	31576175	(139229804)	+	L2b	LINE/L2	3323	3375	(0)	3363537
50	26.5	3.4	2.2	chr6	31588064	31588242	(139217737)	+	GA-rich	Low_complexity	1	185	(0)	3363555
678	21.9	0.8	0.0	chr6	31588252	31588374	(139217605)	+	FLAM_A	SINE/Alu	2	125	(17)	3363556
54	3.8	0.0	0.0	chr6	31588375	31588429	(139217550)	+	(AG)n	Simple_repeat	1	55	(0)	3363557
27	6.1	0.0	0.0	chr6	31620910	31620944	(139185035)	+	(GGTGGC)n	Simple_repeat	1	35	(0)	3363641
1995	12.8	2.0	0.0	chr6	31654951	31655239	(139150740)	C	AluJb	SINE/Alu	(17)	295	1	3363678
341	30.0	16.4	0.9	chr6	31655240	31655316	(139150663)	C	MIRb	SINE/MIR	(191)	77	2	3363677
327	32.8	5.4	9.4	chr6	31655398	31655609	(139150370)	+	L2c	LINE/L2	3185	3387	(0)	3363679
327	26.9	6.9	1.8	chr6	31691018	31691127	(139114852)	C	MIRc	SINE/MIR	(138)	130	15	3363722
541	13.1	3.5	0.0	chr6	31704016	31704099	(139101880)	+	FLAM_C	SINE/Alu	1	87	(56)	3363747
1533	13.6	6.7	7.3	chr6	31704100	31704401	(139101578)	+	AluJo	SINE/Alu	13	312	(0)	3363748
260	35.8	14.3	0.5	chr6	31725783	31726203	(139079776)	+	L2c	LINE/L2	2327	2815	(604)	3363787
249	28.8	5.5	13.6	chr6	31726300	31726520	(139079459)	+	L2c	LINE/L2	2961	3165	(222)	3363787
1638	6.5	0.0	5.6	chr6	31814127	31814357	(138991622)	+	AluY	SINE/Alu	1	218	(93)	3363946
2069	12.8	2.3	0.0	chr6	31818127	31818424	(138987555)	+	AluSz	SINE/Alu	1	305	(7)	3363948
267	34.3	8.1	0.0	chr6	31822664	31822800	(138983179)	+	MIRc	SINE/MIR	2	150	(118)	3363957
14	27.3	0.0	2.0	chr6	31862440	31862489	(138943490)	+	GA-rich	Low_complexity	1	50	(0)	3364050
2312	7.3	2.6	0.3	chr6	31863224	31863524	(138942455)	C	AluSx	SINE/Alu	(4)	308	1	3364051
230	33.6	12.5	2.0	chr6	31973218	31973509	(138832470)	C	L2	LINE/L2	(824)	2595	2269	3364259
715	20.0	2.6	0.0	chr6	32131900	32132049	(138673930)	C	MER5A1	DNA/hAT-Charlie	(1)	165	12	3364433
44	0.0	0.0	0.0	chr6	33144319	33144356	(137661623)	+	(TG)n	Simple_repeat	1	38	(0)	3365895
20	4.2	0.0	0.0	chr6	33144357	33144381	(137661598)	+	(AG)n	Simple_repeat	1	25	(0)	3365896
753	22.1	0.6	3.1	chr6	33144383	33144545	(137661434)	C	AluJb	SINE/Alu	(31)	281	123	3365897
36	0.0	0.0	0.0	chr6	33263385	33263415	(137542564)	+	(AC)n	Simple_repeat	1	31	(0)	3366106
17	0.0	0.0	0.0	chr6	33263416	33263434	(137542545)	+	(GA)n	Simple_repeat	1	19	(0)	3366107
390	32.5	1.7	2.6	chr6	33263614	33263730	(137542249)	C	L2b	LINE/L2	(20)	3355	3240	3366108
3865	12.1	1.3	0.0	chr6	33377334	33377880	(137428099)	C	MER41A	LTR/ERV1	(0)	554	1	3366333
1452	5.1	22.2	1.9	chr6	33377927	33378140	(137427839)	+	AluYc	SINE/Alu	1	270	(29)	3366334
83	18.2	2.5	5.6	chr6	33420013	33420256	(137385723)	+	(CCT)n	Simple_repeat	1	250	(0)	3366422
17	29.4	3.1	1.5	chr6	33425578	33425642	(137380337)	+	GA-rich	Low_complexity	1	67	(0)	3366425
24	26.4	1.2	2.4	chr6	33427858	33427938	(137378041)	+	(GGC)n	Simple_repeat	1	82	(0)	3366429
36	28.3	3.9	2.5	chr6	33440376	33440528	(137365451)	+	(TC)n	Simple_repeat	1	159	(0)	3366449
14	22.2	4.9	3.1	chr6	33440574	33440634	(137365345)	+	(TCCC)n	Simple_repeat	1	64	(0)	3366450
24	6.5	0.0	0.0	chr6	33440679	33440710	(137365269)	+	(TC)n	Simple_repeat	1	32	(0)	3366451
20	19.0	3.6	1.7	chr6	33454843	33454898	(137351081)	+	(TGT)n	Simple_repeat	1	58	(0)	3366470
30	0.0	0.0	0.0	chr6	33789334	33789362	(137016617)	+	(TTTTG)n	Simple_repeat	1	29	(0)	3367133
540	27.1	9.9	3.0	chr6	33840457	33840719	(136965260)	C	MLT1M	LTR/ERVL-MaLR	(348)	324	42	3367206
18	0.0	0.0	0.0	chr6	33926948	33926967	(136879012)	+	(TC)n	Simple_repeat	1	20	(0)	3367309
47	0.0	0.0	0.0	chr6	33926969	33927008	(136878971)	+	(CA)n	Simple_repeat	1	40	(0)	3367310
324	27.7	6.9	9.2	chr6	33989409	33989506	(136816473)	+	MIRb	SINE/MIR	27	132	(136)	3367422
30	5.0	2.3	2.3	chr6	33989507	33989549	(136816430)	+	(TC)n	Simple_repeat	1	44	(0)	3367423
2011	15.2	0.0	0.3	chr6	33989550	33989846	(136816133)	C	AluJb	SINE/Alu	(16)	296	1	3367424
18	0.0	4.5	0.0	chr6	34080809	34080830	(136725149)	+	(TC)n	Simple_repeat	1	23	(0)	3367594
44	9.1	0.0	0.0	chr6	34080831	34080890	(136725089)	+	(CA)n	Simple_repeat	1	60	(0)	3367595
18	7.0	0.0	5.9	chr6	34236747	34236780	(136569199)	+	(GCG)n	Simple_repeat	1	34	(0)	3367935
12	17.6	0.0	5.6	chr6	34237135	34237170	(136568809)	+	(GCG)n	Simple_repeat	1	36	(0)	3367936
13	26.5	2.2	0.0	chr6	34237361	34237405	(136568574)	+	(CGCC)n	Simple_repeat	1	46	(0)	3367937
2054	24.6	13.4	3.9	chr6	34316672	34317548	(136488431)	C	L2	LINE/L2	(346)	3073	2100	3368103
414	22.0	17.6	0.7	chr6	34317562	34317721	(136488258)	+	MLT1G3	LTR/ERVL-MaLR	391	589	(6)	3368104
2291	9.4	0.0	0.0	chr6	34326599	34326884	(136479095)	C	AluSx1	SINE/Alu	(10)	302	17	3368127
7665	7.0	0.1	1.8	chr6	34326887	34327250	(136478729)	C	LTR13A	LTR/ERVK	(0)	966	609	3368128
5713	13.8	5.7	3.4	chr6	34361229	34362166	(136443813)	+	L1MC1	LINE/L1	5354	6328	(5)	3368208
2226	9.8	5.8	6.8	chr6	34389098	34389482	(136416497)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3368269
3397	25.7	14.8	4.8	chr6	34955437	34957154	(135848825)	C	HAL1	LINE/L1	(479)	2028	108	3369532
2171	11.5	1.6	0.0	chr6	35698366	35698670	(135107309)	+	AluSx1	SINE/Alu	1	310	(2)	3370943
2414	11.9	7.5	4.1	chr6	35698671	35699012	(135106967)	C	MSTA	LTR/ERVL-MaLR	(60)	368	1	3370941
46	0.0	0.0	0.0	chr6	35885261	35885299	(134920680)	+	(AC)n	Simple_repeat	1	39	(0)	3371364
28	0.0	0.0	0.0	chr6	35885300	35885330	(134920649)	+	(GA)n	Simple_repeat	1	31	(0)	3371365
431	27.1	8.9	5.9	chr6	36123588	36123892	(134682087)	C	L2b	LINE/L2	(5)	3421	3076	3371838
21	11.4	6.1	1.9	chr6	36124030	36124078	(134681901)	+	GA-rich	Low_complexity	1	52	(0)	3371839
23	23.9	0.0	1.5	chr6	36124085	36124118	(134681861)	+	(TTTC)n	Simple_repeat	1	33	(0)	3371840
38	0.0	0.0	0.0	chr6	36124119	36124153	(134681826)	+	(CCTC)n	Simple_repeat	1	35	(0)	3371841
2291	10.8	0.0	0.0	chr6	36124154	36124479	(134681500)	C	AluSq	SINE/Alu	(0)	313	2	3371842
31	20.5	1.5	0.0	chr6	36287671	36287737	(134518242)	+	GA-rich	Low_complexity	1	68	(0)	3372166
47	0.0	0.0	0.0	chr6	36287756	36287795	(134518184)	+	(AC)n	Simple_repeat	1	40	(0)	3372167
226	30.3	20.4	3.5	chr6	36287860	36288061	(134517918)	+	Tigger19b	DNA/TcMar-Tigger	306	550	(0)	3372168
4008	19.2	4.8	4.6	chr6	36299634	36300178	(134505801)	C	L1MC3	LINE/L1	(8)	7777	7476	3372193
45	2.4	0.0	0.0	chr6	36300179	36300221	(134505758)	+	(GA)n	Simple_repeat	1	43	(0)	3372196
2112	7.2	0.0	0.0	chr6	36300222	36300471	(134505508)	C	AluY	SINE/Alu	(39)	272	23	3372197
28	0.0	0.0	2.9	chr6	36555900	36555933	(134250046)	+	(AC)n	Simple_repeat	1	34	(0)	3372761
66	1.7	0.0	0.0	chr6	36555934	36555994	(134249985)	+	(CT)n	Simple_repeat	1	61	(0)	3372762
471	24.6	7.8	0.8	chr6	36556012	36556142	(134249837)	+	MER103C	DNA/hAT-Charlie	86	226	(71)	3372763
54	0.0	0.0	0.0	chr6	36702294	36702339	(134103640)	+	(GA)n	Simple_repeat	1	46	(0)	3373122
73	0.0	0.0	0.0	chr6	36734314	36734375	(134071604)	+	(AG)n	Simple_repeat	1	62	(0)	3373183
54	8.7	4.7	0.0	chr6	36809198	36809283	(133996696)	+	(AG)n	Simple_repeat	1	90	(0)	3373334
1910	13.4	2.1	0.0	chr6	36809331	36809605	(133996374)	+	AluJo	SINE/Alu	32	312	(0)	3373335
187	26.1	1.5	4.4	chr6	37050490	37050557	(133755422)	C	Tigger19b	DNA/TcMar-Tigger	(201)	349	284	3373817
892	24.9	3.3	1.7	chr6	37109550	37109790	(133696189)	C	MIR	SINE/MIR	(2)	260	16	3373969
910	26.6	1.2	2.5	chr6	37109844	37110107	(133695872)	+	MIRc	SINE/MIR	7	268	(0)	3373970
2536	7.7	0.3	0.0	chr6	37151051	37151362	(133654617)	C	AluSq2	SINE/Alu	(0)	313	1	3374081
18	0.0	6.9	0.0	chr6	37151368	37151396	(133654583)	+	(TTCCCT)n	Simple_repeat	1	31	(0)	3374082
44	6.3	0.0	0.0	chr6	37151399	37151449	(133654530)	+	(TC)n	Simple_repeat	1	51	(0)	3374083
1754	13.2	4.8	4.2	chr6	37151454	37151741	(133654238)	C	AluSz	SINE/Alu	(22)	290	1	3374084
42	4.6	0.0	0.0	chr6	37163444	37163488	(133642491)	+	(CA)n	Simple_repeat	1	45	(0)	3374121
491	24.9	4.2	3.0	chr6	37163490	37163655	(133642324)	C	CR1_Mam	LINE/CR1	(1741)	463	296	3374116
410	14.6	19.6	0.0	chr6	37175710	37175791	(133630188)	C	MER3	DNA/hAT-Charlie	(107)	102	1	3374141
1846	10.4	3.5	5.7	chr6	37175979	37176275	(133629704)	C	AluSx1	SINE/Alu	(21)	291	2	3374142
2130	10.5	1.7	0.3	chr6	37176280	37176574	(133629405)	C	AluSz	SINE/Alu	(13)	299	1	3374143
1053	13.6	0.0	1.9	chr6	37176667	37176821	(133629158)	+	AluJr4	SINE/Alu	115	266	(46)	3374144
870	23.0	10.2	1.8	chr6	37176905	37177239	(133628740)	C	Charlie7	DNA/hAT-Charlie	(2076)	536	63	3374146
2180	12.4	0.6	1.3	chr6	37182497	37182810	(133623169)	C	AluSx	SINE/Alu	(0)	312	1	3374167
716	16.3	1.6	2.3	chr6	37182813	37182941	(133623038)	C	FLAM_A	SINE/Alu	(14)	128	1	3374168
378	26.9	1.4	9.6	chr6	37182951	37183106	(133622873)	C	MIR	SINE/MIR	(109)	159	17	3374165
30	0.0	0.0	0.0	chr6	37187869	37187894	(133618085)	+	(CT)n	Simple_repeat	1	26	(0)	3374180
15	4.8	0.0	0.0	chr6	37187904	37187925	(133618054)	+	(TTCT)n	Simple_repeat	1	22	(0)	3374181
867	15.9	0.2	1.3	chr6	37187927	37188079	(133617900)	C	FLAM_C	SINE/Alu	(90)	212	7	3374182
719	15.0	0.8	1.6	chr6	37214106	37214227	(133591752)	C	L1MB3	LINE/L1	(14)	6169	6049	3374249
16	5.3	0.0	0.0	chr6	37214228	37214247	(133591732)	+	(TC)n	Simple_repeat	1	20	(0)	3374250
2166	10.0	0.4	0.0	chr6	37214248	37214526	(133591453)	C	AluSz	SINE/Alu	(32)	280	1	3374251
1890	23.2	5.2	4.3	chr6	37240131	37240685	(133565294)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	3374322
3974	24.3	3.5	1.9	chr6	37427422	37427986	(133377993)	C	L1MEf	LINE/L1	(4314)	2326	1759	3374673
2198	14.6	3.6	5.5	chr6	37427987	37428002	(133377977)	C	MER65A	LTR/ERV1	(0)	445	430	3374674
64	1.7	0.0	0.0	chr6	37428003	37428061	(133377918)	+	(AG)n	Simple_repeat	1	59	(0)	3374675
2198	14.6	3.6	5.5	chr6	37428062	37428445	(133377534)	C	MER65A	LTR/ERV1	(16)	429	54	3374674
13	28.9	0.0	0.0	chr6	37433291	37433332	(133372647)	+	(GGC)n	Simple_repeat	1	42	(0)	3374686
13	27.1	0.0	3.9	chr6	37433376	37433427	(133372552)	+	(GCGG)n	Simple_repeat	1	52	(0)	3374687
198	30.6	16.7	0.0	chr6	37502064	37502148	(133303831)	C	MIR3	SINE/MIR	(5)	203	102	3374772
18	15.0	0.0	7.7	chr6	37697920	37697971	(133108008)	+	(CTC)n	Simple_repeat	1	52	(0)	3375151
20	22.2	7.6	2.0	chr6	37697972	37698009	(133107970)	+	(CGCT)n	Simple_repeat	3	99	(0)	3375152
126	6.5	5.1	0.0	chr6	37698157	37698352	(133107627)	+	(TC)n	Simple_repeat	1	206	(0)	3375153
460	28.4	6.3	16.1	chr6	38443527	38443966	(132362013)	+	L2a	LINE/L2	2473	2866	(553)	3376405
22	32.4	4.0	0.0	chr6	39037339	39037437	(131768542)	+	(CT)n	Simple_repeat	1	103	(0)	3377369
1196	24.8	4.5	4.5	chr6	39148928	39149286	(131656693)	+	L1ME1	LINE/L1	14	372	(6028)	3377538
28	5.0	0.0	4.4	chr6	39149289	39149333	(131656646)	+	(TCTGTCTCTG)n	Simple_repeat	1	45	(0)	3377539
17	8.5	0.0	0.0	chr6	39149334	39149356	(131656623)	+	(TC)n	Simple_repeat	1	23	(0)	3377540
28	0.0	0.0	0.0	chr6	39149356	39149386	(131656593)	+	(CA)n	Simple_repeat	1	31	(0)	3377541
41	4.7	0.0	0.0	chr6	39149387	39149430	(131656549)	+	(AG)n	Simple_repeat	1	44	(0)	3377542
481	20.1	6.0	4.4	chr6	39149437	39149617	(131656362)	+	L1ME1	LINE/L1	387	560	(5840)	3377538
2325	12.3	3.9	1.4	chr6	39277394	39277764	(131528215)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3377795
368	35.1	0.7	1.3	chr6	39277769	39277918	(131528061)	+	MIR3	SINE/MIR	23	171	(37)	3377796
69	0.0	0.0	0.0	chr6	41109070	41109128	(129696851)	+	(TC)n	Simple_repeat	1	59	(0)	3380632
21	0.0	0.0	0.0	chr6	41109129	41109151	(129696828)	+	(GT)n	Simple_repeat	1	23	(0)	3380633
23	18.4	0.0	0.0	chr6	41201745	41201827	(129604152)	+	(CA)n	Simple_repeat	1	83	(0)	3380774
19	7.5	6.8	2.1	chr6	41415797	41415840	(129390139)	+	(TGTGTCC)n	Simple_repeat	1	47	(0)	3381106
34	0.0	0.0	0.0	chr6	41415958	41415986	(129389993)	+	(GT)n	Simple_repeat	1	29	(0)	3381107
22	0.0	0.0	0.0	chr6	41415987	41416009	(129389970)	+	(AG)n	Simple_repeat	2	24	(0)	3381108
17	24.5	0.0	0.0	chr6	41416105	41416148	(129389831)	+	(AAT)n	Simple_repeat	1	44	(0)	3381109
33	3.1	0.0	0.0	chr6	41417702	41417734	(129388245)	+	(CT)n	Simple_repeat	1	33	(0)	3381113
44	0.0	0.0	0.0	chr6	41417738	41417775	(129388204)	+	(CA)n	Simple_repeat	1	38	(0)	3381114
41	0.0	4.3	2.0	chr6	41432240	41432286	(129373693)	+	(TC)n	Simple_repeat	1	49	(0)	3381145
28	14.5	0.0	0.0	chr6	41524535	41524580	(129281399)	+	(CT)n	Simple_repeat	1	46	(0)	3381337
29	24.1	5.8	1.6	chr6	41546257	41546376	(129259603)	+	(CTCG)n	Simple_repeat	1	127	(0)	3381373
15	5.6	0.0	0.0	chr6	41823842	41823859	(128982120)	+	(GA)n	Simple_repeat	1	27	(25)	3381885
15	5.5	0.0	0.0	chr6	41823860	41823878	(128982101)	+	(GT)n	Simple_repeat	1	19	(0)	3381886
15	5.6	0.0	0.0	chr6	41823879	41823893	(128982086)	+	(GA)n	Simple_repeat	28	52	(0)	3381885
296	23.5	6.4	8.9	chr6	41823955	41824066	(128981913)	+	MIRc	SINE/MIR	115	223	(45)	3381887
1977	18.3	1.6	1.3	chr6	41874681	41874991	(128930988)	+	AluJb	SINE/Alu	1	312	(0)	3381995
12	14.4	0.0	0.0	chr6	41874992	41875015	(128930964)	+	(GAGA)n	Simple_repeat	1	24	(0)	3381996
399	32.9	3.7	1.2	chr6	41906044	41906203	(128899776)	+	MLT1J	LTR/ERVL-MaLR	1	164	(348)	3382060
370	27.8	10.4	3.9	chr6	41906233	41906438	(128899541)	+	MLT1J	LTR/ERVL-MaLR	230	450	(62)	3382060
48	0.0	0.0	0.0	chr6	41987478	41987518	(128818461)	+	(TC)n	Simple_repeat	1	41	(0)	3382264
35	0.0	0.0	0.0	chr6	41987519	41987556	(128818423)	+	(GT)n	Simple_repeat	1	38	(0)	3382265
1431	14.2	0.5	0.0	chr6	41987597	41987801	(128818178)	C	AluJo	SINE/Alu	(106)	206	1	3382266
625	28.9	6.9	1.5	chr6	42028047	42028171	(128777808)	+	MIRb	SINE/MIR	131	267	(1)	3382372
2044	11.7	0.0	0.0	chr6	42216048	42216321	(128589658)	C	AluSg	SINE/Alu	(36)	274	1	3382808
24	0.0	0.0	0.0	chr6	42216360	42216385	(128589594)	+	(GA)n	Simple_repeat	1	26	(0)	3382809
33	0.0	0.0	0.0	chr6	42216386	42216413	(128589566)	+	(GT)n	Simple_repeat	1	28	(0)	3382810
2291	10.8	0.0	0.0	chr6	42216529	42216833	(128589146)	+	AluSq2	SINE/Alu	1	305	(8)	3382811
192	0.0	0.6	0.0	chr6	42262435	42262600	(128543379)	+	(AG)n	Simple_repeat	1	167	(0)	3382890
1253	15.9	7.8	1.3	chr6	42269943	42270169	(128535810)	+	AluJo	SINE/Alu	24	266	(46)	3382904
5298	12.3	2.9	1.4	chr6	42316508	42317314	(128488665)	+	LTR8B	LTR/ERV1	1	820	(0)	3383000
1640	18.4	0.4	0.4	chr6	42555054	42555325	(128250654)	+	AluSx1	SINE/Alu	1	272	(40)	3383510
20	18.2	4.4	0.0	chr6	42555331	42555375	(128250604)	+	GA-rich	Low_complexity	1	47	(0)	3383511
16	0.0	0.0	0.0	chr6	42781779	42781795	(128024184)	+	(A)n	Simple_repeat	1	17	(0)	3384021
26	17.3	0.0	0.0	chr6	42781975	42782050	(128023929)	+	(CCCCCG)n	Simple_repeat	1	76	(0)	3384022
16	5.3	0.0	0.0	chr6	42930539	42930558	(127875421)	+	(AG)n	Simple_repeat	1	20	(0)	3384365
3470	7.7	0.4	0.0	chr6	43393151	43393604	(127412375)	+	LTR2	LTR/ERV1	8	463	(0)	3385258
13	23.3	0.0	0.0	chr6	43393606	43393640	(127412339)	+	GA-rich	Low_complexity	1	35	(0)	3385259
580	15.0	10.3	0.0	chr6	43393685	43393797	(127412182)	+	LTR18B	LTR/ERVL	332	457	(157)	3385260
627	13.3	0.8	3.2	chr6	43393796	43393919	(127412060)	+	LTR18B	LTR/ERVL	225	345	(269)	3385261
16	16.4	0.0	0.0	chr6	43510148	43510181	(127295798)	+	(CGCGGC)n	Simple_repeat	1	34	(0)	3385489
14	27.2	2.0	0.0	chr6	43510376	43510424	(127295555)	+	(CGGCCC)n	Simple_repeat	1	50	(0)	3385490
1784	14.8	1.4	2.8	chr6	43571534	43571817	(127234162)	+	AluJr	SINE/Alu	17	296	(16)	3385595
1893	13.7	1.0	0.3	chr6	43617345	43617636	(127188343)	+	AluSz	SINE/Alu	1	294	(18)	3385696
442	21.5	3.7	10.7	chr6	43617637	43617647	(127188332)	+	MER5A1	DNA/hAT-Charlie	125	133	(33)	3385695
2022	8.5	3.4	0.0	chr6	43617648	43617929	(127188050)	+	AluSc	SINE/Alu	1	292	(17)	3385697
12	6.4	8.1	5.0	chr6	43640682	43640718	(127165261)	+	(CTGATGG)n	Simple_repeat	1	40	(0)	3385733
19	16.3	2.8	0.0	chr6	43737892	43737927	(127068052)	+	GA-rich	Low_complexity	1	37	(0)	3385931
23	3.7	0.0	0.0	chr6	43766690	43766717	(127039262)	+	(GA)n	Simple_repeat	1	28	(0)	3385985
23	21.3	0.0	0.0	chr6	43782131	43782184	(127023795)	+	GA-rich	Low_complexity	1	54	(0)	3385999
445	27.5	5.5	2.6	chr6	43790673	43790847	(127015132)	+	MLT1G1	LTR/ERVL-MaLR	20	212	(367)	3386013
25	21.9	1.7	0.0	chr6	43790904	43790966	(127015013)	+	GA-rich	Low_complexity	1	64	(0)	3386014
530	29.5	10.7	1.6	chr6	43790967	43791221	(127014758)	+	MLT1G1	LTR/ERVL-MaLR	294	574	(5)	3386013
17	39.7	1.1	1.1	chr6	43910428	43910519	(126895460)	+	(TA)n	Simple_repeat	1	93	(0)	3386239
213	30.9	2.4	1.2	chr6	43918115	43918196	(126887783)	+	MIR	SINE/MIR	178	260	(2)	3386248
651	31.7	3.2	5.7	chr6	43918304	43918654	(126887325)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	70	3386249
1148	24.2	16.0	1.9	chr6	43930772	43931035	(126874944)	C	L2a	LINE/L2	(183)	3243	2941	3386270
360	27.9	6.3	0.0	chr6	43931053	43931170	(126874809)	C	MIR	SINE/MIR	(68)	194	76	3386273
50	4.0	0.0	0.0	chr6	44007130	44007181	(126798798)	+	(CT)n	Simple_repeat	1	52	(0)	3386400
747	27.9	11.0	1.4	chr6	44007252	44007545	(126798434)	C	L2a	LINE/L2	(35)	3391	3066	3386401
13	21.1	2.6	0.0	chr6	44313284	44313321	(126492658)	+	(GCCGCT)n	Simple_repeat	1	39	(0)	3386940
233	17.1	0.0	0.0	chr6	44313466	44313506	(126492473)	+	L2a	LINE/L2	3363	3403	(23)	3386941
20	13.7	0.0	0.0	chr6	44462731	44462762	(126343217)	+	(CT)n	Simple_repeat	1	32	(0)	3387230
432	30.4	4.1	1.5	chr6	44462907	44463086	(126342893)	+	MIRc	SINE/MIR	2	185	(83)	3387231
49	4.0	0.0	0.0	chr6	45922808	45922858	(124883121)	+	(AG)n	Simple_repeat	1	51	(0)	3389388
17	0.0	4.2	0.0	chr6	45922989	45923012	(124882967)	+	(CAAA)n	Simple_repeat	1	25	(0)	3389389
41	17.1	3.5	0.0	chr6	46734307	46734391	(124071588)	+	GA-rich	Low_complexity	1	88	(0)	3390625
16	0.0	4.2	4.0	chr6	46734392	46734415	(124071564)	+	(GT)n	Simple_repeat	1	25	(0)	3390626
94	0.0	1.1	1.1	chr6	46734416	46734503	(124071476)	+	(GA)n	Simple_repeat	1	89	(0)	3390627
2324	11.0	1.0	1.0	chr6	46734541	46734849	(124071130)	+	AluSc8	SINE/Alu	1	309	(2)	3390628
988	20.0	0.0	0.6	chr6	49824626	49824790	(120981189)	+	FAM	SINE/Alu	1	164	(21)	3394938
33	7.2	0.0	0.0	chr6	49824792	49824835	(120981144)	+	(AG)n	Simple_repeat	1	44	(0)	3394939
275	27.9	5.8	1.3	chr6	49824848	49824996	(120980983)	+	L1MEh	LINE/L1	1288	1443	(792)	3394940
14200	16.5	8.1	2.7	chr6	49884336	49886736	(120919243)	C	L1MA3	LINE/L1	(4573)	2992	17	3395000
29	0.0	0.0	0.0	chr6	49949776	49949800	(120856179)	+	(TC)n	Simple_repeat	1	25	(0)	3395083
1848	6.6	0.4	0.0	chr6	49949801	49950026	(120855953)	C	AluY	SINE/Alu	(5)	306	80	3395084
28	0.0	0.0	0.0	chr6	51027456	51027486	(119778493)	+	(CT)n	Simple_repeat	1	31	(0)	3396491
53	6.7	0.0	0.0	chr6	51027487	51027549	(119778430)	+	(TG)n	Simple_repeat	1	63	(0)	3396492
2122	17.0	1.9	10.3	chr6	51027607	51027819	(119778160)	+	MSTB	LTR/ERVL-MaLR	1	185	(241)	3396493
2015	17.3	4.2	1.8	chr6	52485472	52485900	(118320079)	+	MSTB1	LTR/ERVL-MaLR	2	432	(0)	3398600
36	0.0	0.0	0.0	chr6	56283875	56283905	(114522074)	+	(CT)n	Simple_repeat	1	31	(0)	3403977
248	29.0	0.0	7.9	chr6	56283986	56284041	(114521938)	+	Charlie23a	DNA/hAT-Charlie	230	283	(56)	3403978
1925	15.7	0.3	2.2	chr6	56284042	56284353	(114521626)	C	AluJb	SINE/Alu	(6)	306	1	3403979
21	26.4	2.3	4.4	chr6	56511813	56511900	(114294079)	+	A-rich	Low_complexity	1	90	(0)	3404254
22	27.7	3.8	1.2	chr6	56512018	56512097	(114293882)	+	(AT)n	Simple_repeat	1	83	(0)	3404255
2069	15.7	6.0	5.8	chr6	56582200	56582599	(114223380)	+	MSTA	LTR/ERVL-MaLR	1	401	(27)	3404332
1881	14.6	0.4	0.4	chr6	56916472	56916725	(113889254)	+	AluJb	SINE/Alu	3	256	(56)	3404829
34	2.4	2.4	0.0	chr6	56916737	56916778	(113889201)	+	(TC)n	Simple_repeat	1	43	(0)	3404830
54	0.0	0.0	0.0	chr6	56916779	56916824	(113889155)	+	(CA)n	Simple_repeat	1	46	(0)	3404831
1521	20.4	1.2	0.0	chr6	63352382	63352636	(107453343)	+	AluJo	SINE/Alu	1	258	(54)	3410355
25	6.5	0.0	0.0	chr6	63352637	63352669	(107453310)	+	(TC)n	Simple_repeat	1	33	(0)	3410356
41	4.7	0.0	0.0	chr6	63352670	63352713	(107453266)	+	(CA)n	Simple_repeat	1	44	(0)	3410357
28	11.7	0.0	0.0	chr6	67777671	67777717	(103028262)	+	(TCCTC)n	Simple_repeat	1	47	(0)	3415886
38	0.0	2.8	0.0	chr6	67777720	67777755	(103028224)	+	(CT)n	Simple_repeat	1	37	(0)	3415887
7791	1.8	0.0	0.0	chr6	67879824	67880939	(102925040)	+	L1PA2	LINE/L1	5032	6147	(8)	3416015
13473	28.8	5.7	5.1	chr6	67881437	67888662	(102917317)	C	HERVH-int	LTR/ERV1	(0)	7713	596	3416017
1860	15.0	5.0	2.7	chr6	68037904	68038272	(102767707)	C	THE1D	LTR/ERVL-MaLR	(3)	378	1	3416204
4845	9.1	1.8	0.4	chr6	68040222	68040931	(102765048)	C	LTR30	LTR/ERV1	(0)	722	3	3416206
2114	16.6	0.8	0.8	chr6	68672670	68673033	(102132946)	+	MLT2D	LTR/ERVL	3	366	(48)	3416960
20	27.2	0.0	0.0	chr6	68673050	68673107	(102132872)	+	(GTGTGT)n	Simple_repeat	1	58	(0)	3416961
2154	18.3	2.8	4.6	chr6	68702003	68702438	(102103541)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3417011
3536	29.7	9.2	4.4	chr6	68737795	68739706	(102066273)	C	L2a	LINE/L2	(11)	3415	1393	3417064
493	34.2	14.1	3.0	chr6	69006903	69007693	(101798286)	+	L2b	LINE/L2	2292	3211	(215)	3417389
41	0.0	0.0	0.0	chr6	69007694	69007728	(101798251)	+	(CA)n	Simple_repeat	1	35	(0)	3417390
1867	18.9	5.0	1.6	chr6	69007780	69008166	(101797813)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	8	3417391
1184	19.1	10.2	10.9	chr6	69764139	69764515	(101041464)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3418380
15	8.8	4.2	0.0	chr6	70293606	70293629	(100512350)	+	(TC)n	Simple_repeat	1	25	(0)	3419018
51	0.0	0.0	0.0	chr6	70293632	70293675	(100512304)	+	(CA)n	Simple_repeat	1	44	(0)	3419019
2930	8.0	4.7	0.0	chr6	70394626	70395013	(100410966)	+	MER48	LTR/ERV1	1	407	(0)	3419144
1076	19.1	1.6	0.0	chr6	73586164	73586352	(97219627)	C	AluJb	SINE/Alu	(3)	309	118	3423826
72	0.0	0.0	0.0	chr6	73886570	73886630	(96919349)	+	(TC)n	Simple_repeat	1	61	(0)	3424369
28	10.6	0.0	0.0	chr6	73886631	73886671	(96919308)	+	(GT)n	Simple_repeat	1	41	(0)	3424370
40	0.0	0.0	0.0	chr6	75208125	75208168	(95597811)	+	(TC)n	Simple_repeat	1	44	(0)	3425883
70	0.0	0.0	0.0	chr6	75208169	75208228	(95597751)	+	(TG)n	Simple_repeat	1	60	(0)	3425884
3148	16.2	2.3	5.8	chr6	75345258	75345892	(95460087)	+	LTR9	LTR/ERV1	1	612	(0)	3426073
13	0.0	0.0	0.0	chr6	75345933	75345949	(95460030)	+	(GTG)n	Simple_repeat	1	17	(0)	3426074
17	18.2	0.0	4.3	chr6	79077039	79077085	(91728894)	+	(CGAG)n	Simple_repeat	1	47	(0)	3430766
29	0.0	0.0	0.0	chr6	79081871	79081895	(91724084)	+	(AC)n	Simple_repeat	1	25	(0)	3430772
348	33.9	11.7	4.1	chr6	79081897	79082235	(91723744)	C	L3b	LINE/CR1	(53)	5179	4812	3430773
2390	16.6	5.0	9.1	chr6	79425919	79426456	(91379523)	C	MLT2B2	LTR/ERVL	(0)	515	1	3431211
49	5.8	0.0	0.0	chr6	79783651	79783705	(91022274)	+	(CT)n	Simple_repeat	1	55	(0)	3431759
23	22.7	0.0	1.7	chr6	79783731	79783789	(91022190)	+	(CTTC)n	Simple_repeat	1	59	(0)	3431760
2152	14.3	8.6	1.3	chr6	82867482	82867689	(87938290)	+	MSTA	LTR/ERVL-MaLR	1	220	(208)	3435713
30	6.1	0.0	0.0	chr6	82867690	82867724	(87938255)	+	(CT)n	Simple_repeat	1	35	(0)	3435714
2152	14.3	8.6	1.3	chr6	82867725	82867911	(87938068)	+	MSTA	LTR/ERVL-MaLR	221	427	(1)	3435713
985	28.2	9.1	2.8	chr6	82953645	82954197	(87851782)	C	L2a	LINE/L2	(16)	3410	2821	3435835
1232	19.3	3.1	16.0	chr6	83006260	83006703	(87799276)	+	MLT1B	LTR/ERVL-MaLR	1	385	(5)	3435925
66	4.5	0.0	0.0	chr6	83556327	83556396	(87249583)	+	(GA)n	Simple_repeat	1	70	(0)	3436690
33	0.0	5.7	0.0	chr6	83892827	83892861	(86913118)	+	(TC)n	Simple_repeat	1	37	(0)	3437129
1920	19.6	9.4	2.7	chr6	83892914	83893396	(86912583)	+	LTR40a	LTR/ERVL	1	519	(0)	3437130
37	0.0	0.0	0.0	chr6	83978728	83978759	(86827220)	+	(GA)n	Simple_repeat	1	32	(0)	3437234
1703	27.9	6.7	1.5	chr6	84232673	84233090	(86572889)	+	LTR16E2	LTR/ERVL	4	448	(120)	3437588
50	0.0	0.0	0.0	chr6	84233091	84233133	(86572846)	+	(CT)n	Simple_repeat	1	43	(0)	3437589
1703	27.9	6.7	1.5	chr6	84233134	84233249	(86572730)	+	LTR16E2	LTR/ERVL	449	567	(1)	3437588
1512	20.2	6.9	1.5	chr6	84657031	84657211	(86148768)	+	MLT1A	LTR/ERVL-MaLR	1	189	(185)	3438104
59	5.6	2.7	0.0	chr6	84657212	84657286	(86148693)	+	(TC)n	Simple_repeat	1	77	(0)	3438105
1512	20.2	6.9	1.5	chr6	84657287	84657445	(86148534)	+	MLT1A	LTR/ERVL-MaLR	190	360	(14)	3438104
6595	8.7	5.3	0.7	chr6	84718364	84719411	(86086568)	C	HERVIP10FH-int	LTR/ERV1	(3165)	1937	839	3438187
15	32.0	0.0	2.9	chr6	84877275	84877284	(85928695)	+	(TGTC)n	Simple_repeat	1	17	(52)	3438365
18	17.6	0.0	0.0	chr6	84877285	84877316	(85928663)	+	(TC)n	Simple_repeat	1	32	(0)	3438366
15	32.0	0.0	2.9	chr6	84877317	84877343	(85928636)	+	(TGTC)n	Simple_repeat	18	69	(0)	3438365
22	0.0	3.7	0.0	chr6	84877321	84877347	(85928632)	+	(TG)n	Simple_repeat	1	28	(0)	3438367
32	0.0	0.0	3.1	chr6	84877498	84877529	(85928450)	+	(CA)n	Simple_repeat	1	32	(0)	3438368
23	27.2	2.9	2.9	chr6	85643224	85643325	(85162654)	+	(CTCG)n	Simple_repeat	1	105	(0)	3439344
1329	34.1	14.2	2.5	chr6	86821360	86822730	(83983249)	+	L2	LINE/L2	855	2412	(1007)	3440674
414	25.1	7.6	5.2	chr6	86822745	86822937	(83983042)	C	MER67D	LTR/ERV1	(35)	479	282	3440675
1546	17.6	13.8	3.1	chr6	87321663	87322043	(83483936)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3441371
12	8.0	7.4	0.0	chr6	87322572	87322598	(83483381)	+	(GGCGG)n	Simple_repeat	1	29	(0)	3441372
16	0.0	5.0	0.0	chr6	87723579	87723598	(83082381)	+	(AG)n	Simple_repeat	1	21	(0)	3442079
611	33.3	8.6	5.4	chr6	87727629	87727900	(83078079)	C	LTR88a	LTR/Gypsy?	(45)	771	480	3442087
265	34.1	4.3	5.4	chr6	87727907	87728092	(83077887)	C	LTR88a	LTR/Gypsy?	(463)	353	170	3442087
95	4.5	1.7	0.8	chr6	87728108	87728224	(83077755)	+	(CTTT)n	Simple_repeat	1	119	(0)	3442089
2904	16.5	6.2	4.8	chr6	87741986	87742442	(83063537)	C	MLT1F1	LTR/ERVL-MaLR	(1)	568	102	3442116
1441	10.9	0.0	0.0	chr6	87742443	87742626	(83063353)	+	AluSx1	SINE/Alu	3	186	(126)	3442117
1771	11.4	7.9	7.4	chr6	87965843	87966028	(82839951)	+	THE1D	LTR/ERVL-MaLR	1	211	(170)	3442512
30	0.0	0.0	0.0	chr6	87966029	87966054	(82839925)	+	(CT)n	Simple_repeat	1	26	(0)	3442513
1771	11.4	7.9	7.4	chr6	87966055	87966246	(82839733)	+	THE1D	LTR/ERVL-MaLR	212	381	(0)	3442512
8144	6.1	0.9	1.2	chr6	88419153	88420210	(82385769)	C	HERV17-int	LTR/ERV1	(6763)	1863	809	3443102
31	6.0	3.6	3.5	chr6	88420211	88420266	(82385713)	+	(CT)n	Simple_repeat	1	58	(0)	3443103
5689	6.6	1.8	1.4	chr6	88420267	88420974	(82385005)	C	HERV17-int	LTR/ERV1	(7922)	704	2	3443102
13	23.5	0.0	0.0	chr6	89412325	89412359	(81393620)	+	(CGCG)n	Simple_repeat	1	35	(0)	3444715
13	23.9	3.1	4.5	chr6	89433119	89433182	(81372797)	+	G-rich	Low_complexity	1	66	(0)	3444762
327	30.6	3.2	2.4	chr6	90137905	90138028	(80667951)	+	MIR3	SINE/MIR	73	197	(11)	3445944
43	0.0	0.0	0.0	chr6	90138054	90138090	(80667889)	+	(AC)n	Simple_repeat	1	37	(0)	3445945
17	5.0	0.0	0.0	chr6	90138091	90138111	(80667868)	+	(TC)n	Simple_repeat	1	21	(0)	3445946
2347	11.5	1.6	0.0	chr6	90138221	90138524	(80667455)	+	AluSx	SINE/Alu	1	309	(3)	3445947
44	2.4	0.0	0.0	chr6	90231973	90232014	(80573965)	+	(GA)n	Simple_repeat	1	42	(0)	3446075
1986	13.9	9.1	8.2	chr6	90350654	90351077	(80454902)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3446259
36	0.0	0.0	0.0	chr6	90414152	90414182	(80391797)	+	(GT)n	Simple_repeat	1	31	(0)	3446362
268	5.8	8.8	1.9	chr6	90414184	90414289	(80391690)	+	HERV17-int	LTR/ERV1	714	827	(7799)	3446363
63	0.0	0.0	0.0	chr6	90845483	90845536	(79960443)	+	(GA)n	Simple_repeat	1	54	(0)	3446940
16	25.0	0.0	2.0	chr6	96837391	96837439	(73968540)	+	GA-rich	Low_complexity	1	49	(0)	3454211
14	26.7	0.0	0.0	chr6	96837420	96837460	(73968519)	+	(GGC)n	Simple_repeat	1	41	(0)	3454212
32	27.8	3.2	2.2	chr6	98834564	98834680	(71971299)	+	GA-rich	Low_complexity	1	118	(0)	3456774
17	14.1	5.1	0.0	chr6	98834764	98834802	(71971177)	+	GA-rich	Low_complexity	1	41	(0)	3456775
2750	15.6	0.5	2.2	chr6	99573971	99574423	(71231556)	C	MER65A	LTR/ERV1	(0)	445	1	3457882
1930	16.9	7.3	5.2	chr6	99574424	99574758	(71231221)	C	MSTD	LTR/ERVL-MaLR	(56)	340	1	3457881
83	1.4	0.0	0.0	chr6	100457997	100458071	(70347908)	+	(TC)n	Simple_repeat	1	75	(0)	3459030
283	32.0	10.4	2.7	chr6	104533549	104533805	(66272174)	+	L2a	LINE/L2	2308	2586	(833)	3464089
54	5.8	6.7	0.0	chr6	104533818	104533907	(66272072)	+	(TC)n	Simple_repeat	1	96	(0)	3464090
35	4.5	2.2	0.0	chr6	104533908	104533953	(66272026)	+	(AC)n	Simple_repeat	1	47	(0)	3464091
28	2.9	0.0	0.0	chr6	105085778	105085807	(65720172)	+	(CT)n	Simple_repeat	1	30	(0)	3464919
57	0.0	0.0	0.0	chr6	105085808	105085856	(65720123)	+	(CA)n	Simple_repeat	1	49	(0)	3464920
46	0.0	0.0	0.0	chr6	105586342	105586380	(65219599)	+	(GT)n	Simple_repeat	1	39	(0)	3465643
18	8.5	0.0	0.0	chr6	105586386	105586410	(65219569)	+	(GA)n	Simple_repeat	1	25	(0)	3465644
1837	16.3	0.7	0.0	chr6	105586427	105586696	(65219283)	C	AluJb	SINE/Alu	(40)	272	1	3465645
32	3.2	0.0	0.0	chr6	105741083	105741114	(65064865)	+	(TC)n	Simple_repeat	1	32	(0)	3465843
400	26.4	8.6	0.0	chr6	105748331	105748436	(65057543)	+	MIRb	SINE/MIR	117	232	(36)	3465854
24	3.6	0.0	0.0	chr6	105748545	105748573	(65057406)	+	(TC)n	Simple_repeat	1	29	(0)	3465855
49	4.0	0.0	0.0	chr6	105748574	105748624	(65057355)	+	(CA)n	Simple_repeat	1	51	(0)	3465856
2007	13.2	0.0	0.0	chr6	105847271	105847542	(64958437)	+	AluSz6	SINE/Alu	1	272	(40)	3465998
76	18.3	3.7	0.0	chr6	105847547	105847709	(64958270)	+	GA-rich	Low_complexity	1	169	(0)	3465999
373	32.8	0.0	10.3	chr6	105891496	105891631	(64914348)	C	L2b	LINE/L2	(10)	3377	3245	3466049
42	0.0	2.0	0.0	chr6	105891632	105891680	(64914299)	+	(GA)n	Simple_repeat	1	50	(0)	3466050
27	0.0	0.0	0.0	chr6	106111853	106111881	(64694098)	+	(TG)n	Simple_repeat	1	29	(0)	3466393
54	0.0	0.0	0.0	chr6	106111882	106111927	(64694052)	+	(GA)n	Simple_repeat	1	46	(0)	3466394
23	13.7	0.0	5.6	chr6	106758097	106758103	(64047876)	+	(TTTC)n	Simple_repeat	1	52	(0)	3467470
24	14.9	0.0	0.0	chr6	106758104	106758148	(64047831)	+	(TCTCTC)n	Simple_repeat	1	45	(0)	3467471
1790	12.1	5.5	1.9	chr6	106758155	106758419	(64047560)	C	AluSx	SINE/Alu	(37)	275	1	3467472
3182	10.8	10.6	3.5	chr6	106808051	106808423	(63997556)	+	LTR35A	LTR/ERV1	143	547	(0)	3467553
4023	17.6	8.8	2.2	chr6	106808425	106810099	(63995880)	+	HERV35I-int	LTR/ERV1	1	1922	(4996)	3467553
3543	11.8	2.4	3.3	chr6	106820494	106821045	(63984934)	+	LTR35A	LTR/ERV1	1	547	(0)	3467553
23	7.2	0.0	0.0	chr6	107843925	107843954	(62962025)	+	(GA)n	Simple_repeat	1	30	(0)	3469472
46	0.0	0.0	0.0	chr6	108116119	108116157	(62689822)	+	(GT)n	Simple_repeat	1	39	(0)	3469984
39	6.3	0.0	0.0	chr6	108116158	108116207	(62689772)	+	(AG)n	Simple_repeat	1	50	(0)	3469985
48	0.0	0.0	0.0	chr6	108143596	108143636	(62662343)	+	(GT)n	Simple_repeat	1	41	(0)	3470038
21	4.0	0.0	0.0	chr6	108143637	108143662	(62662317)	+	(AG)n	Simple_repeat	1	26	(0)	3470039
1650	18.0	1.1	1.1	chr6	108143666	108143937	(62662042)	C	AluJo	SINE/Alu	(39)	273	2	3470040
25	22.3	0.0	4.1	chr6	108260931	108261003	(62544976)	+	(GCC)n	Simple_repeat	1	73	(0)	3470262
9874	11.9	1.6	1.7	chr6	108444486	108445633	(62360346)	C	Tigger1	DNA/TcMar-Tigger	(916)	1502	343	3470648
56	0.0	0.0	0.0	chr6	108445634	108445681	(62360298)	+	(GA)n	Simple_repeat	1	48	(0)	3470649
9874	11.9	1.6	1.7	chr6	108445682	108446034	(62359945)	C	Tigger1	DNA/TcMar-Tigger	(2076)	342	3	3470648
2010	12.5	2.0	0.0	chr6	108533676	108533962	(62272017)	+	AluSx	SINE/Alu	1	293	(19)	3470797
48	0.0	0.0	0.0	chr6	108533965	108534005	(62271974)	+	(GA)n	Simple_repeat	1	41	(0)	3470798
66	17.1	7.5	5.2	chr6	108534006	108534256	(62271723)	+	GA-rich	Low_complexity	15	272	(0)	3470799
14	28.4	1.8	0.0	chr6	108558401	108558455	(62247524)	+	G-rich	Low_complexity	1	56	(0)	3470834
16	5.3	0.0	0.0	chr6	108691171	108691190	(62114789)	+	(GT)n	Simple_repeat	1	20	(0)	3470980
45	2.4	0.0	0.0	chr6	108691191	108691233	(62114746)	+	(GA)n	Simple_repeat	1	43	(0)	3470981
28	5.4	0.0	0.0	chr6	108691234	108691272	(62114707)	+	(GAGGG)n	Simple_repeat	1	39	(0)	3470982
42	0.0	0.0	0.0	chr6	108718512	108718547	(62087432)	+	(TC)n	Simple_repeat	1	36	(0)	3471033
20	0.0	0.0	0.0	chr6	108718548	108718569	(62087410)	+	(GT)n	Simple_repeat	1	22	(0)	3471034
22	19.6	2.6	5.1	chr6	108862640	108862716	(61943263)	+	G-rich	Low_complexity	1	79	(0)	3471263
70	0.0	1.5	1.4	chr6	109142938	109143005	(61662974)	+	(TC)n	Simple_repeat	1	69	(0)	3471729
17	20.6	4.0	0.0	chr6	109298112	109298161	(61507818)	+	(CTCT)n	Simple_repeat	1	52	(0)	3471954
1523	21.1	3.7	5.3	chr6	109339926	109340305	(61465674)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	3472017
267	23.6	28.4	1.6	chr6	109491456	109491640	(61314339)	+	MIRb	SINE/MIR	13	266	(2)	3472257
271	32.6	11.9	4.9	chr6	109496952	109497326	(61308653)	+	L2c	LINE/L2	2882	3287	(88)	3472265
43	0.0	0.0	0.0	chr6	109497327	109497363	(61308616)	+	(CA)n	Simple_repeat	1	37	(0)	3472267
240	32.8	12.0	7.5	chr6	109497364	109497457	(61308522)	+	L2c	LINE/L2	3288	3372	(3)	3472265
357	39.9	8.1	2.5	chr6	110819381	110819655	(59986324)	C	L2	LINE/L2	(723)	2696	2409	3474371
3230	16.0	3.5	2.6	chr6	110819659	110820224	(59985755)	+	MER41B	LTR/ERV1	1	571	(63)	3474373
1659	9.4	0.0	0.0	chr6	110953610	110953822	(59852157)	+	MER41-int	LTR/ERV1	5730	5942	(4)	3474704
4065	9.5	0.0	2.3	chr6	110953825	110954349	(59851630)	+	MER41B	LTR/ERV1	1	521	(113)	3474704
414	28.7	10.8	0.6	chr6	111615223	111615380	(59190599)	C	MIRb	SINE/MIR	(82)	186	11	3475926
227	29.3	6.2	1.3	chr6	111615779	111615854	(59190125)	C	MamTip2	DNA/hAT-Tip100	(174)	131	52	3475927
16	0.0	0.0	0.0	chr6	111619368	111619385	(59186594)	+	(CT)n	Simple_repeat	1	18	(0)	3475938
44	2.4	0.0	0.0	chr6	111619388	111619429	(59186550)	+	(CA)n	Simple_repeat	1	42	(0)	3475939
271	23.5	17.4	0.0	chr6	111619444	111619524	(59186455)	+	LTR104_Mam	LTR/Gypsy	1343	1440	(69)	3475940
317	28.7	1.0	4.7	chr6	111875568	111875673	(58930306)	+	MIRb	SINE/MIR	60	161	(107)	3476298
43	2.1	4.2	0.0	chr6	111875822	111875869	(58930110)	+	(CT)n	Simple_repeat	1	50	(0)	3476299
37	21.7	0.0	0.0	chr6	112254337	112254409	(58551570)	+	(CT)n	Simple_repeat	1	73	(0)	3476842
51	0.0	0.0	0.0	chr6	112665806	112665849	(58140130)	+	(AG)n	Simple_repeat	1	44	(0)	3477406
30	18.5	0.0	0.0	chr6	112665850	112665904	(58140075)	+	(TG)n	Simple_repeat	1	55	(0)	3477407
292	26.4	4.4	3.3	chr6	112665942	112666031	(58139948)	C	LTR78B	LTR/ERV1	(1181)	115	25	3477405
55	0.0	0.0	0.0	chr6	112930943	112930989	(57874990)	+	(TC)n	Simple_repeat	1	47	(0)	3477750
23	18.3	3.0	2.9	chr6	112930992	112931057	(57874922)	+	(CTCCCT)n	Simple_repeat	1	68	(0)	3477751
381	30.8	11.1	5.6	chr6	116521762	116522133	(54283846)	+	MLT1H1	LTR/ERVL-MaLR	1	397	(194)	3482671
36	0.0	0.0	0.0	chr6	116544152	116544182	(54261797)	+	(AG)n	Simple_repeat	1	31	(0)	3482702
39	14.5	0.0	1.4	chr6	118558588	118558621	(52247358)	+	GA-rich	Low_complexity	1	33	(0)	3485325
41	2.6	0.0	0.0	chr6	118558622	118558661	(52247318)	+	(CA)n	Simple_repeat	1	40	(0)	3485326
39	14.5	0.0	1.4	chr6	118558662	118558697	(52247282)	+	GA-rich	Low_complexity	34	69	(0)	3485327
22	0.0	0.0	0.0	chr6	118709533	118709556	(52096423)	+	(GT)n	Simple_repeat	1	24	(0)	3485554
31	0.0	0.0	0.0	chr6	118709557	118709583	(52096396)	+	(GA)n	Simple_repeat	1	27	(0)	3485555
2179	10.0	0.0	2.1	chr6	119115681	119115970	(51690009)	+	AluSx	SINE/Alu	1	284	(28)	3486153
52	2.1	0.0	0.0	chr6	119115971	119116019	(51689960)	+	(AC)n	Simple_repeat	1	49	(0)	3486154
1382	17.8	4.8	17.6	chr6	119116020	119116222	(51689757)	C	LTR52	LTR/ERVL	(190)	231	53	3486151
975	20.9	1.5	3.4	chr6	119137068	119137275	(51668704)	C	MLT1B	LTR/ERVL-MaLR	(6)	384	181	3486191
16	13.2	0.0	0.0	chr6	119137276	119137300	(51668679)	+	(GT)n	Simple_repeat	1	25	(0)	3486192
28	11.2	4.2	0.0	chr6	119137307	119137354	(51668625)	+	GA-rich	Low_complexity	1	50	(0)	3486193
422	17.3	3.7	1.9	chr6	119137360	119137465	(51668514)	C	MLT1B	LTR/ERVL-MaLR	(215)	175	68	3486191
648	18.8	2.6	0.0	chr6	119137470	119137581	(51668398)	C	MLT1B	LTR/ERVL-MaLR	(259)	115	1	3486191
995	33.1	12.6	2.6	chr6	119329717	119330567	(51475412)	+	L2b	LINE/L2	1815	2763	(656)	3486472
3074	20.3	1.4	0.8	chr6	119566581	119567221	(51238758)	+	LTR9D	LTR/ERV1	1	645	(0)	3486744
248	26.4	3.7	5.8	chr6	119567222	119567303	(51238676)	C	MER103C	DNA/hAT-Charlie	(102)	195	110	3486743
351	32.1	11.5	2.4	chr6	119707366	119707617	(51098362)	+	MLT1O	LTR/ERVL-MaLR	114	391	(151)	3486924
44	25.6	1.6	0.8	chr6	119707626	119707747	(51098232)	+	GA-rich	Low_complexity	1	124	(0)	3486925
1483	21.6	4.9	1.7	chr6	122407776	122407961	(48398018)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	189	3490376
30	0.0	0.0	0.0	chr6	122407962	122407987	(48397992)	+	(AG)n	Simple_repeat	1	26	(0)	3490377
1483	21.6	4.9	1.7	chr6	122407988	122408154	(48397825)	C	MLT1A	LTR/ERVL-MaLR	(186)	188	10	3490376
676	29.5	15.6	1.2	chr6	124965634	124965979	(45840000)	+	L2a	LINE/L2	3014	3418	(8)	3493638
12	15.3	5.3	2.5	chr6	125224350	125224387	(45581592)	+	(CTCTTTC)n	Simple_repeat	1	40	(0)	3494048
31	0.0	0.0	0.0	chr6	125224471	125224497	(45581482)	+	(CT)n	Simple_repeat	1	27	(0)	3494049
584	25.8	0.8	13.2	chr6	129710856	129711127	(41094852)	C	MIRb	SINE/MIR	(10)	258	8	3499825
590	25.8	11.2	1.6	chr6	129731634	129731818	(41074161)	C	MIR	SINE/MIR	(18)	244	40	3499857
268	32.6	2.0	3.0	chr6	129854136	129854236	(40951743)	+	L2c	LINE/L2	3321	3420	(6)	3500024
19	4.2	0.0	0.0	chr6	131534055	131534077	(39271902)	+	(CT)n	Simple_repeat	1	23	(0)	3502482
47	2.3	0.0	0.0	chr6	131534078	131534122	(39271857)	+	(TG)n	Simple_repeat	1	45	(0)	3502483
1908	12.7	6.3	1.9	chr6	133740072	133740432	(37065547)	C	THE1D	LTR/ERVL-MaLR	(3)	378	1	3505639
38	2.8	0.0	0.0	chr6	133895003	133895039	(36910940)	+	(CT)n	Simple_repeat	1	37	(0)	3505836
631	28.1	5.8	0.0	chr6	134021536	134021731	(36784248)	C	MIRc	SINE/MIR	(30)	238	31	3506030
474	28.2	11.5	9.6	chr6	134022735	134023118	(36782861)	+	MER65D	LTR/ERV1	1	392	(81)	3506034
2329	16.2	4.2	5.8	chr6	134039659	134040048	(36765931)	+	MSTB	LTR/ERVL-MaLR	1	391	(35)	3506061
13	11.6	2.2	8.7	chr6	134174939	134174983	(36630996)	+	(GCCTC)n	Simple_repeat	1	46	(0)	3506324
33	5.1	0.0	0.0	chr6	134387956	134387996	(36417983)	+	(TC)n	Simple_repeat	1	41	(0)	3506810
40	2.6	0.0	0.0	chr6	134387997	134388035	(36417944)	+	(CA)n	Simple_repeat	1	39	(0)	3506811
480	29.6	1.9	3.8	chr6	134388037	134388194	(36417785)	C	MIR	SINE/MIR	(92)	170	16	3506812
535	20.5	8.0	5.8	chr6	135183845	135184015	(35621964)	C	MIR3	SINE/MIR	(19)	189	15	3508092
326	24.5	9.7	3.6	chr6	135219550	135219714	(35586265)	C	LTR33	LTR/ERVL	(240)	275	100	3508137
12	7.8	3.2	6.2	chr6	135689127	135689157	(35116822)	+	(GTGA)n	Simple_repeat	1	32	(0)	3508797
44	0.0	0.0	0.0	chr6	135689162	135689199	(35116780)	+	(GA)n	Simple_repeat	1	38	(0)	3508798
428	26.3	0.0	0.0	chr6	136226645	136226720	(34579259)	+	FLAM_A	SINE/Alu	1	76	(66)	3509540
394	19.3	3.4	11.6	chr6	136226737	136226865	(34579114)	+	MIR	SINE/MIR	57	174	(88)	3509541
14	8.2	3.9	0.0	chr6	136226915	136226940	(34579039)	+	(AAAC)n	Simple_repeat	1	27	(0)	3509542
50	0.0	0.0	0.0	chr6	136381878	136381920	(34424059)	+	(AC)n	Simple_repeat	1	43	(0)	3509787
14	26.3	0.0	9.8	chr6	136662505	136662586	(34143393)	+	(CTTC)n	Simple_repeat	1	82	(0)	3510247
249	28.8	1.7	1.7	chr6	136662612	136662731	(34143248)	C	L1ME4c	LINE/L1	(377)	453	334	3510248
199	25.0	0.0	0.0	chr6	136756406	136756441	(34049538)	+	L2c	LINE/L2	3270	3305	(82)	3510393
653	11.6	0.0	0.0	chr6	136756447	136756541	(34049438)	C	AluSz6	SINE/Alu	(10)	302	208	3510394
220	34.4	10.7	1.9	chr6	136756600	136756753	(34049226)	C	L2c	LINE/L2	(1285)	2134	1966	3510385
29	0.0	0.0	0.0	chr6	136792542	136792569	(34013410)	+	(CGCCG)n	Simple_repeat	1	28	(0)	3510466
2154	13.6	12.4	1.8	chr6	136941254	136941635	(33864344)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3510717
1999	19.6	8.0	1.9	chr6	136952332	136952822	(33853157)	+	MER39	LTR/ERV1	1	707	(0)	3510734
23	0.0	0.0	0.0	chr6	136952850	136952874	(33853105)	+	(TG)n	Simple_repeat	1	25	(0)	3510735
34	3.0	0.0	0.0	chr6	136952875	136952908	(33853071)	+	(GA)n	Simple_repeat	1	34	(0)	3510736
446	28.0	5.2	2.1	chr6	136953027	136953212	(33852767)	C	MIRb	SINE/MIR	(0)	268	77	3510737
334	23.8	0.0	13.7	chr6	136961802	136961918	(33844061)	+	MIR	SINE/MIR	8	108	(154)	3510753
29	0.0	0.0	0.0	chr6	136962044	136962068	(33843911)	+	(AG)n	Simple_repeat	1	25	(0)	3510754
185	24.4	3.7	10.3	chr6	136962114	136962200	(33843779)	+	L2c	LINE/L2	3289	3369	(18)	3510755
22	7.2	0.0	0.0	chr6	137230339	137230367	(33575612)	+	(AG)n	Simple_repeat	1	29	(0)	3511154
1337	21.8	5.5	4.5	chr6	137709412	137709583	(33096396)	+	MLT1B	LTR/ERVL-MaLR	4	172	(218)	3511850
30	6.1	0.0	0.0	chr6	137709584	137709618	(33096361)	+	(TC)n	Simple_repeat	1	35	(0)	3511851
1337	21.8	5.5	4.5	chr6	137709619	137709824	(33096155)	+	MLT1B	LTR/ERVL-MaLR	173	385	(5)	3511850
17	4.9	0.0	0.0	chr6	137904906	137904926	(32901053)	+	(T)n	Simple_repeat	1	21	(0)	3512166
398	28.0	14.9	0.9	chr6	137908139	137908473	(32897506)	C	L1ME4a	LINE/L1	(205)	5919	5530	3512172
25	6.3	0.0	0.0	chr6	137908496	137908528	(32897451)	+	(TC)n	Simple_repeat	1	33	(0)	3512173
41	0.0	0.0	0.0	chr6	137908529	137908563	(32897416)	+	(CA)n	Simple_repeat	1	35	(0)	3512174
47	0.0	0.0	0.0	chr6	137948273	137948312	(32857667)	+	(AC)n	Simple_repeat	1	40	(0)	3512231
24	0.0	0.0	0.0	chr6	137948313	137948339	(32857640)	+	(TC)n	Simple_repeat	1	27	(0)	3512232
55	0.0	0.0	0.0	chr6	138215842	138215888	(32590091)	+	(GT)n	Simple_repeat	1	47	(0)	3512636
20	0.0	0.0	0.0	chr6	138215891	138215912	(32590067)	+	(AG)n	Simple_repeat	1	22	(0)	3512637
2222	9.7	2.3	1.6	chr6	138215965	138216273	(32589706)	C	AluSp	SINE/Alu	(2)	311	1	3512638
1616	12.3	14.7	2.4	chr6	138946872	138947035	(31858944)	+	THE1D	LTR/ERVL-MaLR	2	211	(170)	3513825
48	0.0	0.0	0.0	chr6	138947036	138947076	(31858903)	+	(CT)n	Simple_repeat	1	41	(0)	3513826
1616	12.3	14.7	2.4	chr6	138947077	138947243	(31858736)	+	THE1D	LTR/ERVL-MaLR	212	381	(0)	3513825
2316	9.2	0.3	1.3	chr6	138984079	138984382	(31821597)	C	AluSx	SINE/Alu	(11)	301	1	3513894
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
18	22.7	0.0	0.0	chr6	139545640	139545685	(31260294)	+	(TGTGTC)n	Simple_repeat	1	46	(0)	3514869
20	17.0	0.0	0.0	chr6	139545677	139545722	(31260257)	+	GA-rich	Low_complexity	1	46	(0)	3514870
442	26.0	7.4	6.8	chr6	139693173	139693333	(31112646)	C	MER5B	DNA/hAT-Charlie	(1)	177	16	3515084
19	0.0	0.0	0.0	chr6	139693416	139693436	(31112543)	+	(AG)n	Simple_repeat	1	21	(0)	3515085
40	0.0	0.0	0.0	chr6	139693437	139693470	(31112509)	+	(GT)n	Simple_repeat	1	34	(0)	3515086
24	6.9	0.0	0.0	chr6	139722317	139722347	(31083632)	+	(CT)n	Simple_repeat	1	31	(0)	3515120
20	17.8	8.5	0.9	chr6	139872074	139872154	(30933825)	+	GA-rich	Low_complexity	1	87	(0)	3515336
282	34.4	5.2	9.8	chr6	141755727	141755829	(29050150)	C	L2	LINE/L2	(937)	2482	2384	3517656
38	2.8	0.0	0.0	chr6	141755830	141755866	(29050113)	+	(GT)n	Simple_repeat	1	37	(0)	3517657
48	4.2	0.0	0.0	chr6	141755869	141755918	(29050061)	+	(AG)n	Simple_repeat	1	50	(0)	3517658
282	34.4	5.2	9.8	chr6	141755919	141756352	(29049627)	C	L2	LINE/L2	(1036)	2383	1968	3517656
34	0.0	3.0	0.0	chr6	142820290	142820322	(27985657)	+	(CT)n	Simple_repeat	1	34	(0)	3519031
19	16.3	0.0	0.0	chr6	143511562	143511597	(27294382)	+	(GCA)n	Simple_repeat	1	36	(0)	3519988
299	35.9	1.2	3.8	chr6	143803943	143804025	(27001954)	+	MIRc	SINE/MIR	78	157	(51)	3520439
606	27.7	9.6	6.8	chr6	143804028	143804543	(27001436)	C	MLT1G1	LTR/ERVL-MaLR	(2)	577	46	3520442
17	15.8	5.9	1.9	chr6	144064364	144064414	(26741565)	+	(GCCCCCGC)n	Simple_repeat	1	54	(0)	3520784
82	4.9	3.8	0.0	chr6	144877440	144877545	(25928434)	+	(TC)n	Simple_repeat	1	110	(0)	3522003
24	3.5	0.0	0.0	chr6	144877546	144877574	(25928405)	+	(AC)n	Simple_repeat	1	29	(0)	3522004
340	8.0	0.0	2.0	chr6	146885802	146885852	(23920127)	C	MER61A	LTR/ERV1	(0)	341	292	3524635
302	32.9	0.4	4.2	chr6	146886813	146886923	(23919056)	C	MIRc	SINE/MIR	(114)	154	41	3524636
4557	10.5	0.9	0.9	chr6	146887061	146887694	(23918285)	C	MER41B	LTR/ERV1	(0)	634	1	3524637
410	36.8	14.0	3.7	chr6	146894435	146895354	(23910625)	C	L2	LINE/L2	(2117)	1302	273	3524641
2253	11.4	0.3	1.3	chr6	146895488	146895795	(23910184)	+	AluSp	SINE/Alu	1	305	(8)	3524645
664	31.5	8.7	5.6	chr6	146897048	146897461	(23908518)	C	MamTip3	DNA/hAT-Tip100	(30)	470	43	3524646
424	36.7	5.4	6.6	chr6	146897988	146898533	(23907446)	+	L3	LINE/CR1	3272	3810	(289)	3524648
1746	29.5	11.2	3.7	chr6	146994424	146996112	(23809867)	C	L1ME3E	LINE/L1	(1281)	4865	3036	3524771
42	0.0	0.0	0.0	chr6	147196851	147196886	(23609093)	+	(GT)n	Simple_repeat	1	36	(0)	3525081
17	21.5	0.0	3.9	chr6	147202754	147202805	(23603174)	+	(CTTC)n	Simple_repeat	1	52	(0)	3525090
51	0.0	0.0	0.0	chr6	147392018	147392061	(23413918)	+	(GT)n	Simple_repeat	1	44	(0)	3525329
245	33.1	3.6	3.0	chr6	148109757	148109921	(22696058)	C	LTR81B	LTR/Gypsy	(194)	1199	1034	3526331
12	31.5	2.1	6.3	chr6	148109958	148110050	(22695929)	+	(CTTC)n	Simple_repeat	1	95	(0)	3526332
60	1.8	0.0	0.0	chr6	148244905	148244960	(22561019)	+	(TG)n	Simple_repeat	1	56	(0)	3526541
26	3.3	0.0	0.0	chr6	148244961	148244991	(22560988)	+	(AG)n	Simple_repeat	1	31	(0)	3526542
2220	12.2	3.3	3.0	chr6	148854877	148855239	(21950740)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3527555
1431	20.9	10.2	2.3	chr6	148870944	148871110	(21934869)	+	MLT1A	LTR/ERVL-MaLR	1	173	(201)	3527575
56	5.7	2.7	0.0	chr6	148871111	148871183	(21934796)	+	(TC)n	Simple_repeat	1	75	(0)	3527576
1431	20.9	10.2	2.3	chr6	148871184	148871358	(21934621)	+	MLT1A	LTR/ERVL-MaLR	174	373	(1)	3527575
474	27.6	4.5	3.0	chr6	149034620	149034817	(21771162)	C	HAL1	LINE/L1	(710)	1797	1597	3527827
73	0.0	0.0	0.0	chr6	149034835	149034896	(21771083)	+	(TC)n	Simple_repeat	1	62	(0)	3527828
1017	26.5	11.4	5.0	chr6	149034900	149035473	(21770506)	C	HAL1	LINE/L1	(969)	1496	799	3527827
21	0.0	0.0	0.0	chr6	149049909	149049931	(21756048)	+	(TC)n	Simple_repeat	1	23	(0)	3527850
41	0.0	0.0	0.0	chr6	149049932	149049966	(21756013)	+	(CA)n	Simple_repeat	1	35	(0)	3527851
51	2.1	0.0	0.0	chr6	149058346	149058393	(21747586)	+	(TG)n	Simple_repeat	1	48	(0)	3527858
905	14.4	0.0	0.0	chr6	149313160	149313291	(21492688)	C	AluJr	SINE/Alu	(8)	304	173	3528240
233	30.3	10.2	11.6	chr6	149313293	149313759	(21492220)	+	L2	LINE/L2	2151	2610	(809)	3528241
61	0.0	0.0	0.0	chr6	149423585	149423636	(21382343)	+	(TC)n	Simple_repeat	1	52	(0)	3528410
506	32.0	12.4	7.5	chr6	149711555	149711898	(21094081)	+	MLT1J2-int	LTR/ERVL-MaLR	756	1126	(261)	3528989
23	17.5	2.2	0.0	chr6	149711942	149711986	(21093993)	+	GA-rich	Low_complexity	1	46	(0)	3528994
323	20.6	0.0	3.1	chr6	149712015	149712079	(21093900)	+	MLT1J2-int	LTR/ERVL-MaLR	1188	1250	(137)	3528989
2107	10.8	0.0	2.7	chr6	150326902	150327196	(20478783)	+	THE1B	LTR/ERVL-MaLR	76	362	(2)	3530041
19	0.0	0.0	0.0	chr6	150502517	150502537	(20303442)	+	(TC)n	Simple_repeat	1	21	(0)	3530316
44	0.0	0.0	0.0	chr6	150502538	150502575	(20303404)	+	(CA)n	Simple_repeat	1	38	(0)	3530317
2580	13.3	2.3	5.8	chr6	150520436	150520643	(20285336)	+	MSTB1	LTR/ERVL-MaLR	1	215	(217)	3530348
60	1.8	0.0	0.0	chr6	150520644	150520699	(20285280)	+	(TC)n	Simple_repeat	1	56	(0)	3530349
2580	13.3	2.3	5.8	chr6	150520700	150520938	(20285041)	+	MSTB1	LTR/ERVL-MaLR	216	432	(0)	3530348
2321	10.0	1.6	0.7	chr6	151345513	151345821	(19460158)	+	AluSx	SINE/Alu	1	312	(0)	3531831
48	4.2	0.0	0.0	chr6	151345884	151345933	(19460046)	+	(TG)n	Simple_repeat	1	50	(0)	3531832
33	4.6	2.2	0.0	chr6	151345934	151345976	(19460003)	+	(GA)n	Simple_repeat	1	44	(0)	3531833
232	17.2	4.9	3.3	chr6	151345980	151346039	(19459940)	C	L1ME4a	LINE/L1	(189)	5935	5875	3531834
228	22.4	3.3	3.3	chr6	151346152	151346211	(19459768)	C	L1MC4	LINE/L1	(375)	7667	7608	3531835
16	31.7	0.0	1.8	chr6	151390555	151390610	(19415369)	+	GA-rich	Low_complexity	1	56	(0)	3531908
15	19.7	0.0	0.0	chr6	151390627	151390655	(19415324)	+	(GC)n	Simple_repeat	1	29	(0)	3531909
18	22.0	0.0	0.0	chr6	151390648	151390705	(19415274)	+	(AGC)n	Simple_repeat	1	58	(0)	3531910
18	6.8	0.0	5.7	chr6	151390752	151390786	(19415193)	+	(CCCTC)n	Simple_repeat	1	35	(0)	3531911
49	0.0	0.0	0.0	chr6	151669148	151669189	(19136790)	+	(GA)n	Simple_repeat	1	42	(0)	3532437
1493	26.9	9.4	8.8	chr6	152871617	152871726	(17934253)	+	L1MC4a	LINE/L1	5264	5350	(2532)	3534136
29	6.2	0.0	0.0	chr6	152871727	152871760	(17934219)	+	(TC)n	Simple_repeat	1	34	(0)	3534137
1493	26.9	9.4	8.8	chr6	152871761	152872689	(17933290)	+	L1MC4a	LINE/L1	5351	6309	(1573)	3534136
13	12.7	2.6	5.1	chr6	152982872	152982909	(17823070)	+	(GGCGCT)n	Simple_repeat	1	39	(0)	3534290
44	1.9	5.3	1.7	chr6	154559816	154559872	(16246107)	+	(TC)n	Simple_repeat	1	60	(0)	3536618
49	0.0	0.0	0.0	chr6	154570085	154570126	(16235853)	+	(CA)n	Simple_repeat	1	42	(0)	3536629
438	27.6	3.5	2.4	chr6	154615686	154615852	(16190127)	+	LTR16A1	LTR/ERVL	1	169	(287)	3536707
5005	12.8	0.8	0.4	chr6	154650281	154651004	(16154975)	C	Tigger1	DNA/TcMar-Tigger	(1687)	731	5	3536778
93	2.1	2.1	0.0	chr6	155047651	155047745	(15758234)	+	(GA)n	Simple_repeat	1	97	(0)	3537533
22	3.9	0.0	0.0	chr6	155140547	155140573	(15665406)	+	(TG)n	Simple_repeat	1	27	(0)	3537711
51	0.0	0.0	0.0	chr6	155140574	155140617	(15665362)	+	(GA)n	Simple_repeat	1	44	(0)	3537712
292	32.0	13.8	0.0	chr6	155140649	155140848	(15665131)	+	L3	LINE/CR1	3670	3901	(198)	3537709
889	22.5	3.9	3.4	chr6	156533460	156533704	(14272275)	C	MLT1A	LTR/ERVL-MaLR	(0)	408	153	3539594
1428	15.2	2.4	6.1	chr6	156533705	156533968	(14272011)	C	AluJb	SINE/Alu	(54)	258	5	3539595
87	22.4	1.5	0.5	chr6	156599931	156600133	(14205846)	+	(CT)n	Simple_repeat	1	206	(0)	3539697
21	14.8	0.0	0.0	chr6	156600148	156600186	(14205793)	+	(AGAG)n	Simple_repeat	1	39	(0)	3539698
28	0.0	3.3	0.0	chr6	156686525	156686554	(14119425)	+	(CTCTCCT)n	Simple_repeat	1	31	(0)	3539815
617	26.6	12.1	1.7	chr6	156856329	156856582	(13949397)	C	MIR	SINE/MIR	(1)	261	2	3540108
25	0.0	0.0	0.0	chr6	156856673	156856700	(13949279)	+	(CT)n	Simple_repeat	1	28	(0)	3540109
49	0.0	0.0	0.0	chr6	156856701	156856742	(13949237)	+	(CA)n	Simple_repeat	1	42	(0)	3540110
313	28.8	11.2	4.7	chr6	157462058	157462272	(13343707)	C	X7A_LINE	LINE/CR1	(36)	231	1	3540949
2270	11.2	0.0	0.0	chr6	157465760	157466055	(13339924)	+	AluSz6	SINE/Alu	1	296	(16)	3540953
2595	4.5	0.0	1.3	chr6	157515452	157515764	(13290215)	C	AluY	SINE/Alu	(2)	309	1	3541040
4506	6.2	0.5	0.2	chr6	157754759	157755310	(13050669)	C	MER41A	LTR/ERV1	(0)	554	1	3541411
2386	14.8	15.1	1.1	chr6	157813613	157814050	(12991929)	C	LTR54	LTR/ERV1	(0)	510	1	3541520
565	21.6	5.6	0.7	chr6	158004004	158004138	(12801841)	+	LTR87	LTR/ERVL?	480	621	(3)	3541802
4781	9.6	1.6	0.2	chr6	158004149	158004773	(12801206)	+	MER41B	LTR/ERV1	1	634	(0)	3541803
11	27.7	0.0	0.0	chr6	158818711	158818749	(11987230)	+	G-rich	Low_complexity	1	39	(0)	3543166
13	15.7	0.0	7.3	chr6	158818816	158818856	(11987123)	+	G-rich	Low_complexity	1	41	(0)	3543167
2315	6.0	1.4	0.3	chr6	158862958	158863241	(11942738)	+	AluY	SINE/Alu	1	287	(24)	3543263
59	1.9	0.0	0.0	chr6	158863246	158863300	(11942679)	+	(TG)n	Simple_repeat	1	55	(0)	3543264
16	4.8	0.0	4.2	chr6	158863315	158863334	(11942645)	+	(AG)n	Simple_repeat	1	20	(0)	3543265
803	17.9	0.0	0.0	chr6	158863335	158863451	(11942528)	C	AluJo	SINE/Alu	(195)	117	1	3543266
358	25.4	6.8	0.0	chr6	160178104	160178241	(10627738)	+	L1M6	LINE/L1	5558	5705	(673)	3545159
21	12.2	2.8	0.0	chr6	160178242	160178277	(10627702)	+	(GT)n	Simple_repeat	1	37	(0)	3545162
65	12.5	0.9	0.9	chr6	160178277	160178383	(10627596)	+	(GA)n	Simple_repeat	1	108	(0)	3545163
14	24.8	3.5	3.3	chr6	160790570	160790627	(10015352)	+	GA-rich	Low_complexity	1	60	(0)	3545806
24	24.9	1.2	4.9	chr6	160790671	160790750	(10015229)	+	GA-rich	Low_complexity	1	81	(0)	3545806
312	18.6	13.0	6.4	chr6	160790752	160790923	(10015056)	+	HERVKC4-int	LTR/ERVK	2619	2803	(2459)	3545807
3776	14.2	4.1	0.0	chr6	160796255	160796837	(10009142)	+	PABL_A-int	LTR/ERV1	1	608	(5338)	3545809
40	6.6	0.0	0.0	chr6	160796839	160796886	(10009093)	+	(CT)n	Simple_repeat	1	48	(0)	3545810
4938	15.9	3.7	4.1	chr6	160796887	160797781	(10008198)	+	PABL_A-int	LTR/ERV1	2277	3564	(2699)	3545809
33421	8.3	1.8	1.3	chr6	161310159	161315114	(9490865)	C	HERVIP10FH-int	LTR/ERV1	(0)	5102	1	3546488
2293	12.2	0.0	0.0	chr6	163308384	163308685	(7497294)	+	AluSz6	SINE/Alu	1	302	(10)	3549264
18	4.5	0.0	0.0	chr6	163517036	163517058	(7288921)	+	(AC)n	Simple_repeat	1	23	(0)	3549568
49	9.3	0.0	0.0	chr6	163517059	163517127	(7288852)	+	(CT)n	Simple_repeat	1	69	(0)	3549569
283	32.7	7.7	7.0	chr6	163517130	163517234	(7288745)	C	MLT2F	LTR/ERVL	(58)	339	102	3549570
571	21.9	4.4	0.7	chr6	163517235	163517386	(7288593)	C	MLT1E1	LTR/ERVL-MaLR	(349)	305	148	3549571
236	25.0	0.0	2.4	chr6	163598356	163598437	(7207542)	+	L1MEd	LINE/L1	5310	5389	(853)	3549658
26	10.2	0.0	4.3	chr6	163598513	163598558	(7207421)	+	(AG)n	Simple_repeat	1	46	(0)	3549666
293	27.1	8.3	7.2	chr6	163598605	163598935	(7207044)	+	L1ME3G	LINE/L1	377	679	(2098)	3549667
2447	7.2	0.0	0.3	chr6	163641186	163641492	(7164487)	C	AluY	SINE/Alu	(5)	306	1	3549730
16	9.3	0.0	0.0	chr6	163641509	163641531	(7164448)	+	(AG)n	Simple_repeat	1	23	(0)	3549731
30	0.0	0.0	0.0	chr6	163641546	163641571	(7164408)	+	(GA)n	Simple_repeat	1	26	(0)	3549732
488	24.9	13.1	8.0	chr6	163641699	163642096	(7163883)	+	MLT1H	LTR/ERVL-MaLR	114	534	(15)	3549733
4256	11.2	2.5	0.3	chr6	164337813	164338432	(6467547)	+	MER41B	LTR/ERV1	1	634	(0)	3550658
14	14.0	0.0	5.7	chr6	166275821	166275855	(4530124)	+	(CGC)n	Simple_repeat	1	35	(0)	3553041
35	2.4	0.0	0.0	chr6	166347219	166347235	(4458744)	+	(AG)n	Simple_repeat	1	17	(0)	3553141
34	0.0	0.0	0.0	chr6	166347236	166347264	(4458715)	+	(GT)n	Simple_repeat	1	29	(0)	3553142
35	2.4	0.0	0.0	chr6	166347265	166347289	(4458690)	+	(AG)n	Simple_repeat	2	26	(0)	3553143
22	22.8	1.9	0.0	chr6	166532815	166532866	(4273113)	+	(TG)n	Simple_repeat	1	53	(0)	3553370
6707	10.5	3.8	1.5	chr6	166950876	166951859	(3854120)	C	LTR13	LTR/ERVK	(0)	1007	1	3553804
453	31.4	9.9	4.5	chr6	167692277	167692563	(3113416)	+	HAL1b	LINE/L1	1399	1702	(719)	3554661
66	1.7	0.0	0.0	chr6	167692596	167692656	(3113323)	+	(TC)n	Simple_repeat	1	61	(0)	3554662
1794	14.8	0.4	2.5	chr6	167692675	167692958	(3113021)	+	AluJr	SINE/Alu	1	278	(34)	3554663
1309	15.0	0.0	0.0	chr6	167700798	167700984	(3104995)	+	AluSx1	SINE/Alu	125	311	(1)	3554674
22	24.3	0.0	3.1	chr6	167700985	167701048	(3104931)	+	G-rich	Low_complexity	1	64	(0)	3554675
285	31.0	0.0	0.0	chr6	167782511	167782597	(3023382)	C	MER5A1	DNA/hAT-Charlie	(79)	87	1	3554771
884	25.3	0.0	7.1	chr6	167782703	167782957	(3023022)	C	MLT2D	LTR/ERVL	(0)	414	178	3554772
497	34.2	7.8	0.0	chr6	167857259	167857460	(2948519)	+	L3	LINE/CR1	2903	3121	(978)	3554883
213	32.0	2.3	4.6	chr6	168035740	168035870	(2770109)	+	MIRc	SINE/MIR	24	151	(117)	3555076
15	15.4	0.0	5.0	chr6	168799539	168799553	(2006426)	+	(CTTTCC)n	Simple_repeat	1	14	(0)	3555816
34	6.9	2.2	0.0	chr6	168799554	168799599	(2006380)	+	(TC)n	Simple_repeat	1	47	(0)	3555817
15	15.4	0.0	5.0	chr6	168799600	168799623	(2006356)	+	(CTTTCC)n	Simple_repeat	3	26	(0)	3555818
342	26.4	4.7	1.6	chr6	168799702	168799824	(2006155)	C	L1MC5	LINE/L1	(18)	9286	9160	3555819
261	18.0	5.9	9.8	chr6	168864813	168864935	(1941044)	C	HERVFH19-int	LTR/ERV1	(7323)	396	279	3555895
25	6.5	0.0	0.0	chr6	168865126	168865158	(1940821)	+	(GT)n	Simple_repeat	1	33	(0)	3555896
2084	14.7	0.0	0.3	chr7	448969	449268	(158896705)	+	AluSz	SINE/Alu	1	299	(13)	3558359
23	21.9	1.6	1.6	chr7	449270	449331	(158896642)	+	GA-rich	Low_complexity	1	63	(0)	3558360
203	20.2	3.2	0.2	chr7	451176	451641	(158894332)	+	(CT)n	Simple_repeat	1	481	(0)	3558364
17	4.2	0.0	0.0	chr7	498311	498335	(158847638)	+	(TCTC)n	Simple_repeat	1	25	(0)	3558416
393	28.5	7.5	0.8	chr7	611042	611165	(158734808)	C	MIR	SINE/MIR	(70)	192	60	3558571
17	21.6	0.0	2.5	chr7	611246	611285	(158734688)	+	(CT)n	Simple_repeat	1	40	(0)	3558572
188	29.4	12.5	3.2	chr7	611589	611711	(158734262)	+	L2b	LINE/L2	3240	3375	(0)	3558573
182	31.2	0.7	1.9	chr7	1579849	1580522	(157765451)	+	(TCTCTC)n	Simple_repeat	1	679	(0)	3560116
249	31.6	7.4	11.1	chr7	1641357	1641751	(157704222)	+	L2b	LINE/L2	2966	3344	(31)	3560232
395	30.6	4.5	1.0	chr7	1695982	1696176	(157649797)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	173	3560326
23	7.2	0.0	0.0	chr7	1696177	1696206	(157649767)	+	(TG)n	Simple_repeat	1	30	(0)	3560327
1884	15.9	0.3	3.4	chr7	1696381	1696701	(157649272)	C	AluJr	SINE/Alu	(1)	311	1	3560328
22	23.5	3.1	0.0	chr7	1711407	1711471	(157634502)	+	G-rich	Low_complexity	1	67	(0)	3560352
70	3.0	0.0	0.0	chr7	1711559	1711627	(157634346)	+	(AG)n	Simple_repeat	1	69	(0)	3560353
21	7.7	0.0	0.0	chr7	2308036	2308063	(157037910)	+	(TG)n	Simple_repeat	1	28	(0)	3561102
20	4.1	0.0	0.0	chr7	2308063	2308087	(157037886)	+	(GA)n	Simple_repeat	1	25	(0)	3561103
18	11.7	0.0	0.0	chr7	2690209	2690236	(156655737)	+	(GA)n	Simple_repeat	1	28	(0)	3561847
1497	15.2	0.0	0.9	chr7	2690238	2690468	(156655505)	C	AluJr	SINE/Alu	(31)	281	53	3561848
1943	15.3	2.3	0.0	chr7	4705182	4705481	(154640492)	C	AluJo	SINE/Alu	(5)	307	1	3565433
57	5.0	0.0	0.0	chr7	4705512	4705573	(154640400)	+	(TC)n	Simple_repeat	1	62	(0)	3565434
1721	12.3	1.5	1.5	chr7	4705574	4705834	(154640139)	C	AluSc	SINE/Alu	(48)	261	1	3565435
1639	16.1	1.0	9.4	chr7	5431148	5431476	(153914497)	C	AluJr	SINE/Alu	(10)	302	2	3567009
17	0.0	0.0	0.0	chr7	5431530	5431548	(153914425)	+	(TC)n	Simple_repeat	1	19	(0)	3567010
32	3.2	0.0	0.0	chr7	5431549	5431580	(153914393)	+	(CA)n	Simple_repeat	1	32	(0)	3567011
59	17.9	3.5	1.4	chr7	5452733	5452874	(153893099)	+	(TCTGTC)n	Simple_repeat	1	147	(0)	3567066
893	14.6	0.0	0.0	chr7	5452887	5453016	(153892957)	C	FLAM_C	SINE/Alu	(13)	130	1	3567067
67	3.1	0.0	0.0	chr7	6944439	6944504	(152401469)	+	(TC)n	Simple_repeat	1	66	(0)	3570444
27	16.4	0.0	5.0	chr7	7429402	7429461	(151916512)	+	(TC)n	Simple_repeat	1	60	(0)	3571076
24	19.2	1.8	1.8	chr7	7429454	7429508	(151916465)	+	(TG)n	Simple_repeat	1	56	(0)	3571077
825	29.0	9.0	2.9	chr7	7617826	7618385	(151727588)	C	L1ME3G	LINE/L1	(266)	658	61	3571330
1133	27.5	11.7	3.6	chr7	8339413	8339913	(151006060)	+	MLT1H	LTR/ERVL-MaLR	1	547	(2)	3572380
54	0.0	0.0	0.0	chr7	8339960	8340005	(151005968)	+	(CT)n	Simple_repeat	1	46	(0)	3572381
2398	10.3	0.0	0.0	chr7	10854305	10854605	(148491368)	C	AluSx	SINE/Alu	(11)	301	1	3575408
31	0.0	0.0	0.0	chr7	10854621	10854654	(148491319)	+	(AC)n	Simple_repeat	1	34	(0)	3575409
46	0.0	0.0	0.0	chr7	10854655	10854693	(148491280)	+	(AG)n	Simple_repeat	1	39	(0)	3575410
6893	17.0	4.1	3.0	chr7	10854709	10855995	(148489978)	+	MER52A	LTR/ERV1	450	1751	(4)	3575411
1989	10.7	9.2	2.0	chr7	10893222	10893403	(148452570)	+	THE1D	LTR/ERVL-MaLR	1	210	(171)	3575466
43	3.9	3.8	0.0	chr7	10893404	10893456	(148452517)	+	(TC)n	Simple_repeat	1	55	(0)	3575467
1989	10.7	9.2	2.0	chr7	10893457	10893626	(148452347)	+	THE1D	LTR/ERVL-MaLR	211	381	(0)	3575466
7242	26.5	7.3	4.5	chr7	10893627	10895075	(148450898)	+	L2a	LINE/L2	1684	3178	(248)	3575465
9810	22.5	8.4	8.1	chr7	12593526	12595108	(146750865)	C	HERVFH21-int	LTR/ERV1	(4986)	1543	2	3577552
1098	20.0	20.5	4.8	chr7	12595111	12595509	(146750464)	C	LTR21A	LTR/ERV1	(3)	478	1	3577552
967	25.2	4.7	7.9	chr7	12713462	12714015	(146631958)	C	MER39	LTR/ERV1	(0)	707	10	3577734
14	10.4	6.5	0.0	chr7	12714046	12714076	(146631897)	+	(ATCC)n	Simple_repeat	1	33	(0)	3577735
15	9.7	0.0	0.0	chr7	12714069	12714090	(146631883)	+	(CA)n	Simple_repeat	1	22	(0)	3577736
609	31.9	1.4	1.4	chr7	12714134	12714343	(146631630)	+	L2a	LINE/L2	3213	3422	(4)	3577737
78	2.1	4.0	1.9	chr7	12927998	12928098	(146417875)	+	(TTCCT)n	Simple_repeat	1	105	(0)	3578062
28	3.1	0.0	0.0	chr7	12928099	12928131	(146417842)	+	(TC)n	Simple_repeat	1	33	(0)	3578063
1214	19.9	9.2	1.2	chr7	13132345	13132593	(146213380)	+	MSTB	LTR/ERVL-MaLR	9	279	(147)	3578341
1879	14.1	6.8	1.9	chr7	14048046	14048407	(145297566)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3579540
619	30.0	9.9	8.0	chr7	16260144	16260646	(143085327)	+	LTR40a	LTR/ERVL	5	518	(1)	3582254
14	14.1	7.7	0.0	chr7	16421279	16421317	(142924656)	+	(CCCGG)n	Simple_repeat	1	42	(0)	3582435
21	0.0	0.0	0.0	chr7	16464653	16464675	(142881298)	+	(TC)n	Simple_repeat	1	23	(0)	3582482
5455	7.5	1.3	1.9	chr7	16595396	16596166	(142749807)	C	MER4E	LTR/ERV1	(0)	766	1	3582707
1378	8.7	15.9	8.0	chr7	16643737	16644000	(142701973)	+	AluJo	SINE/Alu	1	289	(23)	3582779
30	9.9	0.0	0.0	chr7	16644002	16644044	(142701929)	+	(GA)n	Simple_repeat	1	43	(0)	3582780
221	27.5	4.2	1.4	chr7	16644106	16644175	(142701798)	+	L2b	LINE/L2	3300	3371	(4)	3582781
260	30.0	4.3	0.0	chr7	16740277	16740386	(142605587)	+	MLT1I	LTR/ERVL-MaLR	101	215	(196)	3582953
259	40.0	3.2	1.4	chr7	18157476	18157688	(141188285)	C	L2c	LINE/L2	(665)	2754	2538	3584911
56	0.0	0.0	0.0	chr7	18157805	18157852	(141188121)	+	(GA)n	Simple_repeat	1	48	(0)	3584914
14	11.7	0.0	3.3	chr7	20786969	20786998	(138558975)	+	(GCCGC)n	Simple_repeat	1	30	(0)	3588263
15	15.9	2.9	0.0	chr7	20787033	20787067	(138558906)	+	G-rich	Low_complexity	1	36	(0)	3588264
2482	5.9	0.0	0.3	chr7	20815175	20815477	(138530496)	+	AluY	SINE/Alu	2	303	(8)	3588309
2524	5.8	0.0	0.0	chr7	20815573	20815866	(138530107)	C	AluSc5	SINE/Alu	(15)	294	1	3588310
1138	18.0	0.0	0.6	chr7	21400653	21400819	(137945154)	+	FAM	SINE/Alu	1	166	(19)	3589202
35	0.0	0.0	0.0	chr7	21400825	21400854	(137945119)	+	(TG)n	Simple_repeat	1	30	(0)	3589203
19	4.3	0.0	0.0	chr7	21400855	21400878	(137945095)	+	(AG)n	Simple_repeat	1	24	(0)	3589204
1814	16.2	11.7	3.1	chr7	22094825	22095213	(137250760)	C	MSTA	LTR/ERVL-MaLR	(1)	427	1	3590198
24	3.2	3.1	0.0	chr7	22184920	22184951	(137161022)	+	(CT)n	Simple_repeat	1	33	(0)	3590301
590	22.1	7.0	3.9	chr7	22561902	22562080	(136783893)	+	MER5A	DNA/hAT-Charlie	3	187	(2)	3590848
25	22.1	3.2	3.1	chr7	22562163	22562215	(136783758)	+	(TCTCTT)n	Simple_repeat	1	53	(0)	3590849
39	8.0	0.0	0.0	chr7	22562216	22562269	(136783704)	+	(CCT)n	Simple_repeat	1	54	(0)	3590850
25	22.1	3.2	3.1	chr7	22562270	22562300	(136783673)	+	(TCTCTT)n	Simple_repeat	6	36	(0)	3590851
30	0.0	0.0	0.0	chr7	22562301	22562328	(136783645)	+	(CTCC)n	Simple_repeat	1	28	(0)	3590852
399	32.5	5.0	1.3	chr7	22562352	22562582	(136783391)	+	MIRb	SINE/MIR	3	242	(26)	3590853
2518	19.6	11.1	6.0	chr7	22586207	22586907	(136759066)	+	MER21C	LTR/ERVL	189	929	(9)	3590887
96	6.1	1.7	0.0	chr7	22587030	22587149	(136758824)	+	(TC)n	Simple_repeat	1	122	(0)	3590888
4453	13.3	0.3	0.9	chr7	22707661	22708325	(136637648)	+	HERVH-int	LTR/ERV1	4489	5149	(2564)	3591092
1449	11.8	1.7	3.8	chr7	22708306	22708542	(136637431)	+	HERVH-int	LTR/ERV1	5588	5819	(1894)	3591092
31061	11.3	5.7	4.3	chr7	22805097	22805988	(136539985)	+	MER61-int	LTR/ERV1	2242	3038	(2179)	3591237
43	0.0	0.0	0.0	chr7	22805989	22806025	(136539948)	+	(TC)n	Simple_repeat	1	37	(0)	3591240
31061	11.3	5.7	4.3	chr7	22806026	22808138	(136537835)	+	MER61-int	LTR/ERV1	3039	5214	(3)	3591237
25	6.1	0.0	2.8	chr7	23073281	23073316	(136272657)	+	(TC)n	Simple_repeat	1	36	(0)	3591673
20	18.6	0.0	0.0	chr7	23073318	23073354	(136272619)	+	(AC)n	Simple_repeat	1	37	(0)	3591674
1448	12.0	15.5	0.4	chr7	23272847	23273087	(136072886)	C	AluJb	SINE/Alu	(15)	297	14	3592027
298	27.5	3.2	0.0	chr7	23299006	23299096	(136046877)	C	L2a	LINE/L2	(39)	3387	3294	3592090
328	28.3	3.4	1.7	chr7	23431686	23431800	(135914173)	+	MER5A	DNA/hAT-Charlie	6	122	(67)	3592329
31	10.1	2.9	4.2	chr7	24573277	24573297	(134772676)	+	(GCG)n	Simple_repeat	1	20	(0)	3594106
38	0.0	0.0	0.0	chr7	24573298	24573332	(134772641)	+	(GGA)n	Simple_repeat	1	35	(0)	3594107
31	10.1	2.9	4.2	chr7	24573333	24573380	(134772593)	+	(GCG)n	Simple_repeat	3	50	(0)	3594108
16	10.0	4.0	7.7	chr7	24573401	24573450	(134772523)	+	G-rich	Low_complexity	1	52	(0)	3594109
25	20.8	1.3	5.0	chr7	24573501	24573579	(134772394)	+	(CGG)n	Simple_repeat	1	80	(0)	3594110
4413	8.5	8.1	0.3	chr7	24793781	24794264	(134551709)	C	Harlequin-int	LTR/ERV1	(3753)	1349	815	3594397
37	4.3	4.2	0.0	chr7	24794265	24794312	(134551661)	+	(TC)n	Simple_repeat	1	50	(0)	3594398
4602	16.9	5.7	8.8	chr7	24794313	24795350	(134550623)	C	Harlequin-int	LTR/ERV1	(5901)	995	1	3594397
2248	8.8	0.3	7.9	chr7	24901048	24901364	(134444609)	+	AluSg	SINE/Alu	1	293	(17)	3594559
16	4.7	0.0	0.0	chr7	24901365	24901375	(134444598)	+	(GA)n	Simple_repeat	2	12	(0)	3594560
398	28.6	0.0	0.0	chr7	24901477	24901574	(134444399)	+	L4_B_Mam	LINE/RTE-X	4181	4278	(663)	3594561
183	26.4	13.3	4.0	chr7	24982095	24982169	(134363804)	+	L3	LINE/CR1	3101	3183	(916)	3594694
20	0.0	0.0	0.0	chr7	24982198	24982219	(134363754)	+	(TC)n	Simple_repeat	1	22	(0)	3594695
53	0.0	0.0	0.0	chr7	24982220	24982264	(134363709)	+	(TG)n	Simple_repeat	1	45	(0)	3594696
15	0.0	0.0	0.0	chr7	25427902	25427918	(133918055)	+	(CT)n	Simple_repeat	1	17	(0)	3595428
1465	20.3	5.1	9.8	chr7	25488238	25488415	(133857558)	+	MLT1B	LTR/ERVL-MaLR	1	190	(200)	3595516
34	0.0	0.0	0.0	chr7	25488416	25488444	(133857529)	+	(CT)n	Simple_repeat	1	29	(0)	3595517
1465	20.3	5.1	9.8	chr7	25488445	25488675	(133857298)	+	MLT1B	LTR/ERVL-MaLR	191	390	(0)	3595516
23	3.7	0.0	0.0	chr7	25549742	25549769	(133796204)	+	(TC)n	Simple_repeat	1	28	(0)	3595601
33	3.1	0.0	0.0	chr7	25549770	25549802	(133796171)	+	(TG)n	Simple_repeat	1	33	(0)	3595602
17	24.2	1.7	3.3	chr7	25620100	25620158	(133725815)	+	(TCCC)n	Simple_repeat	1	60	(0)	3595696
3763	11.6	6.1	10.2	chr7	25732580	25733253	(133612720)	C	LTR9B	LTR/ERV1	(0)	644	1	3595863
1731	12.6	14.3	2.7	chr7	25792686	25793053	(133552920)	C	MSTA	LTR/ERVL-MaLR	(0)	428	11	3595948
1240	25.1	5.8	0.9	chr7	25882984	25883199	(133462774)	+	L1MC4	LINE/L1	7680	7904	(138)	3596061
46	0.0	0.0	0.0	chr7	25883200	25883238	(133462735)	+	(AC)n	Simple_repeat	1	39	(0)	3596062
1240	23.4	2.6	1.0	chr7	25883239	25883376	(133462597)	+	L1MC4	LINE/L1	7898	8042	(0)	3596061
369	19.8	18.6	0.9	chr7	26187402	26187507	(133158466)	C	FRAM	SINE/Alu	(47)	129	1	3596577
514	23.6	9.8	1.7	chr7	26187605	26187781	(133158192)	+	MER2	DNA/TcMar-Tigger	127	319	(26)	3596578
830	20.6	13.3	4.0	chr7	26214186	26214459	(133131514)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	222	3596604
368	28.7	0.6	13.9	chr7	26409442	26409643	(132936330)	C	L1M5	LINE/L1	(1440)	4706	4532	3597002
30	0.0	0.0	0.0	chr7	26409724	26409749	(132936224)	+	(TG)n	Simple_repeat	1	26	(0)	3597003
262	30.2	8.2	6.5	chr7	26418028	26418243	(132927730)	+	LTR85b	LTR/Gypsy?	12	235	(588)	3597019
966	25.7	5.5	4.9	chr7	26418332	26418617	(132927356)	+	LTR85b	LTR/Gypsy?	497	784	(0)	3597019
34	0.0	0.0	0.0	chr7	26864056	26864084	(132481889)	+	(CA)n	Simple_repeat	1	29	(0)	3597641
2040	13.8	11.9	4.3	chr7	27713232	27713450	(131632523)	C	MSTA	LTR/ERVL-MaLR	(0)	428	199	3598919
2408	8.4	0.0	0.3	chr7	27713451	27713746	(131632227)	C	AluSq2	SINE/Alu	(18)	295	1	3598920
1944	10.3	0.0	2.3	chr7	27726677	27726937	(131619036)	+	AluSz	SINE/Alu	2	256	(56)	3598947
29	22.5	3.8	0.0	chr7	27726944	27727023	(131618950)	+	GA-rich	Low_complexity	1	83	(0)	3598948
820	25.2	5.7	2.2	chr7	27775484	27775921	(131570052)	+	MLT2F	LTR/ERVL	2	499	(164)	3599031
19	18.9	0.0	0.0	chr7	27775976	27776017	(131569956)	+	(TCTG)n	Simple_repeat	1	42	(0)	3599032
33	9.4	0.0	0.0	chr7	28158141	28158186	(131187787)	+	(AC)n	Simple_repeat	1	46	(0)	3599583
40	2.6	0.0	0.0	chr7	28158187	28158225	(131187748)	+	(AG)n	Simple_repeat	1	39	(0)	3599584
41	0.0	0.0	0.0	chr7	29195596	29195630	(130150343)	+	(GA)n	Simple_repeat	1	35	(0)	3601208
18	0.0	0.0	0.0	chr7	29195631	29195650	(130150323)	+	(TG)n	Simple_repeat	1	20	(0)	3601209
18	0.0	0.0	0.0	chr7	29195650	29195669	(130150304)	+	(GA)n	Simple_repeat	1	20	(0)	3601210
20	13.9	0.0	0.0	chr7	29675279	29675310	(129670663)	+	(CA)n	Simple_repeat	1	32	(0)	3601952
41	8.0	0.0	0.0	chr7	29675311	29675363	(129670610)	+	(CT)n	Simple_repeat	1	53	(0)	3601953
30	32.7	1.4	2.8	chr7	29723750	29723889	(129622084)	+	(CA)n	Simple_repeat	1	142	(0)	3602024
20	7.8	0.0	0.0	chr7	29723930	29723956	(129622017)	+	(CT)n	Simple_repeat	1	27	(0)	3602025
535	20.2	14.5	0.0	chr7	29965943	29966066	(129379907)	C	MLT1G1	LTR/ERVL-MaLR	(6)	589	445	3602398
56	14.5	2.0	0.0	chr7	29966077	29966175	(129379798)	+	GA-rich	Low_complexity	1	101	(0)	3602399
774	23.4	6.1	4.1	chr7	29966176	29966420	(129379553)	C	MLT1G1	LTR/ERVL-MaLR	(345)	234	4	3602398
12	32.3	2.4	3.6	chr7	30284934	30285015	(129060958)	+	(GGC)n	Simple_repeat	1	84	(0)	3602922
52	11.5	0.0	0.0	chr7	30294974	30295050	(129050923)	+	(AG)n	Simple_repeat	1	77	(0)	3602934
60	0.0	0.0	0.0	chr7	30295051	30295101	(129050872)	+	(GT)n	Simple_repeat	1	51	(0)	3602935
92	1.1	2.2	0.0	chr7	30520838	30520927	(128825046)	+	(GA)n	Simple_repeat	1	92	(0)	3603253
2360	10.7	4.9	0.6	chr7	30550035	30550382	(128795591)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3603303
19	13.4	2.9	0.0	chr7	30911659	30911692	(128434281)	+	GA-rich	Low_complexity	1	35	(0)	3603856
44	0.0	0.0	0.0	chr7	32267587	32267624	(127078349)	+	(CT)n	Simple_repeat	1	38	(0)	3605911
337	26.1	15.2	0.0	chr7	32267820	32267953	(127078020)	C	MIRb	SINE/MIR	(7)	261	104	3605912
16	25.3	2.9	2.8	chr7	32297857	32297925	(127048048)	+	(CTCTTTT)n	Simple_repeat	1	71	(0)	3605968
124	1.7	1.6	0.0	chr7	32297956	32298076	(127047897)	+	(TC)n	Simple_repeat	1	123	(0)	3605969
2068	13.1	3.9	3.2	chr7	32682010	32682387	(126663586)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3606631
34	11.9	0.0	0.0	chr7	32738446	32738500	(126607473)	+	(GAGA)n	Simple_repeat	1	55	(0)	3606690
26	11.2	0.0	0.0	chr7	32738500	32738538	(126607435)	+	(GT)n	Simple_repeat	1	39	(0)	3606691
737	30.7	5.4	0.0	chr7	33762128	33762355	(125583618)	C	MIRb	SINE/MIR	(8)	260	20	3608348
22	0.0	0.0	0.0	chr7	33762360	33762383	(125583590)	+	(GA)n	Simple_repeat	1	24	(0)	3608349
2276	8.0	0.0	1.1	chr7	34852016	34852301	(124493672)	+	AluYk2	SINE/Alu	1	283	(28)	3609831
30	3.1	0.0	0.0	chr7	34852303	34852335	(124493638)	+	(GAAAGAGA)n	Simple_repeat	1	33	(0)	3609832
19	10.4	0.0	0.0	chr7	34852336	34852367	(124493606)	+	(GAAG)n	Simple_repeat	1	32	(0)	3609833
332	28.1	0.0	6.6	chr7	34852370	34852491	(124493482)	+	MIR3	SINE/MIR	71	181	(27)	3609834
13	21.9	0.0	2.6	chr7	35695017	35695055	(123650918)	+	G-rich	Low_complexity	1	39	(0)	3611056
58	21.6	3.8	3.7	chr7	36219515	36219697	(123126276)	+	A-rich	Low_complexity	1	190	(0)	3611929
49	2.2	0.0	0.0	chr7	36219762	36219807	(123126166)	+	(AG)n	Simple_repeat	1	46	(0)	3611930
30	0.0	0.0	0.0	chr7	36219808	36219840	(123126133)	+	(TG)n	Simple_repeat	1	33	(0)	3611931
2260	11.4	0.7	0.0	chr7	36308669	36308966	(123037007)	C	AluSx	SINE/Alu	(12)	300	1	3612085
42	4.7	0.0	0.0	chr7	36309002	36309046	(123036927)	+	(TC)n	Simple_repeat	1	45	(0)	3612086
32	2.7	0.0	0.0	chr7	36309047	36309084	(123036889)	+	(GT)n	Simple_repeat	1	38	(0)	3612087
25	21.9	1.7	0.0	chr7	37590614	37590671	(121755302)	+	GA-rich	Low_complexity	1	59	(0)	3613996
4110	9.8	0.2	5.3	chr7	37590716	37591341	(121754632)	C	PRIMA4_LTR	LTR/ERV1	(0)	594	1	3613997
1224	16.3	2.1	11.3	chr7	37663628	37663946	(121682027)	+	THE1D	LTR/ERVL-MaLR	1	289	(92)	3614076
1733	22.4	7.4	2.5	chr7	38406469	38406700	(120939273)	+	MLT2B3	LTR/ERVL	1	238	(316)	3615094
65	4.1	2.6	0.0	chr7	38406701	38406776	(120939197)	+	(TC)n	Simple_repeat	1	78	(0)	3615095
1733	22.4	7.3	2.5	chr7	38406777	38407021	(120938952)	+	MLT2B3	LTR/ERVL	239	501	(60)	3615094
41	14.3	3.9	0.0	chr7	39085708	39085797	(120260176)	+	GA-rich	Low_complexity	1	93	(0)	3616052
48	0.0	0.0	0.0	chr7	39575538	39575578	(119770395)	+	(GA)n	Simple_repeat	1	41	(0)	3616735
1961	15.0	2.3	0.3	chr7	39888376	39888669	(119457304)	+	7SLRNA	srpRNA	5	304	(16)	3617339
15	5.6	0.0	0.0	chr7	39888671	39888689	(119457284)	+	(AG)n	Simple_repeat	1	19	(0)	3617340
15	0.0	0.0	0.0	chr7	39949858	39949876	(119396097)	+	(GGC)n	Simple_repeat	1	19	(0)	3617484
13	27.2	3.4	5.5	chr7	39949956	39950043	(119395930)	+	(CCCAG)n	Simple_repeat	1	91	(0)	3617485
1611	18.7	0.3	4.5	chr7	40002786	40003095	(119342878)	+	AluJo	SINE/Alu	4	300	(12)	3617576
63	0.0	0.0	0.0	chr7	40003154	40003207	(119342766)	+	(AC)n	Simple_repeat	1	54	(0)	3617577
18	7.8	0.0	0.0	chr7	40003208	40003232	(119342741)	+	(CT)n	Simple_repeat	1	25	(0)	3617578
23	0.0	0.0	0.0	chr7	40089699	40089723	(119256250)	+	(AG)n	Simple_repeat	1	25	(0)	3617764
37	0.0	0.0	0.0	chr7	40089724	40089755	(119256218)	+	(GT)n	Simple_repeat	1	32	(0)	3617765
109	21.2	2.0	0.4	chr7	41700634	41700881	(117645092)	+	GA-rich	Low_complexity	1	253	(0)	3620215
697	19.4	0.0	6.2	chr7	42851880	42852008	(116493965)	+	FLAM_A	SINE/Alu	1	121	(21)	3621768
60	0.0	0.0	0.0	chr7	42852011	42852061	(116493912)	+	(GA)n	Simple_repeat	1	51	(0)	3621769
899	17.6	26.8	0.3	chr7	42887678	42887994	(116457979)	+	MER54B	LTR/ERVL	1	404	(497)	3621806
43	0.0	0.0	0.0	chr7	42887995	42888031	(116457942)	+	(TC)n	Simple_repeat	1	37	(0)	3621807
52	0.0	2.1	0.0	chr7	42888046	42888093	(116457880)	+	(GT)n	Simple_repeat	1	49	(0)	3621808
237	20.6	6.4	5.2	chr7	42888108	42888184	(116457789)	+	MER54B	LTR/ERVL	367	444	(349)	3621806
17	21.1	0.0	0.0	chr7	42889234	42889267	(116456706)	+	A-rich	Low_complexity	1	34	(0)	3621809
374	16.3	5.2	1.1	chr7	42889328	42889420	(116456553)	+	MER107	DNA/hAT-Charlie	68	164	(36)	3621810
45	8.3	0.0	0.0	chr7	42889422	42889486	(116456487)	+	(AGAG)n	Simple_repeat	1	65	(0)	3621811
8451	3.6	0.0	0.4	chr7	43734591	43735560	(115610413)	C	LTR13A	LTR/ERVK	(0)	966	1	3623073
1224	24.5	6.3	6.8	chr7	44094755	44094833	(115251140)	+	L1MC5	LINE/L1	8759	8840	(464)	3623803
35	0.0	0.0	0.0	chr7	44094834	44094863	(115251110)	+	(GA)n	Simple_repeat	1	30	(0)	3623804
1224	24.5	6.3	6.8	chr7	44094864	44095323	(115250650)	+	L1MC5	LINE/L1	8841	9294	(10)	3623803
2713	12.9	1.4	1.2	chr7	44194068	44194492	(115151481)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3623942
46	0.0	0.0	0.0	chr7	44846025	44846063	(114499910)	+	(AC)n	Simple_repeat	1	39	(0)	3625011
21	3.7	3.6	0.0	chr7	44846064	44846091	(114499882)	+	(GA)n	Simple_repeat	1	29	(0)	3625012
5084	6.2	2.4	0.6	chr7	44992056	44992740	(114353233)	C	SVA_B	Retroposon/SVA	(0)	1383	715	3625294
23	21.1	2.7	4.0	chr7	45215979	45216052	(114129921)	+	G-rich	Low_complexity	1	76	(0)	3625664
606	22.9	3.1	3.7	chr7	45216070	45216232	(114129741)	C	MLT1A	LTR/ERVL-MaLR	(212)	162	1	3625665
49	4.8	1.6	0.0	chr7	45230737	45230800	(114115173)	+	(AG)n	Simple_repeat	1	65	(0)	3625684
1467	22.9	1.5	0.9	chr7	45252431	45252765	(114093208)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	28	3625712
58	9.3	0.0	0.0	chr7	45252781	45252861	(114093112)	+	(TC)n	Simple_repeat	1	81	(0)	3625713
28	3.1	0.0	0.0	chr7	45252862	45252894	(114093079)	+	(GT)n	Simple_repeat	1	33	(0)	3625714
18	17.6	0.0	0.0	chr7	45252894	45252925	(114093048)	+	GA-rich	Low_complexity	1	32	(0)	3625715
2037	29.8	7.8	5.1	chr7	46929240	46930462	(112415511)	C	L1MEd	LINE/L1	(5411)	1675	416	3627859
27	26.2	1.1	2.2	chr7	47188531	47188620	(112157353)	+	(TAGAGA)n	Simple_repeat	1	91	(0)	3628209
46	0.0	0.0	0.0	chr7	47433884	47433922	(111912051)	+	(TC)n	Simple_repeat	1	39	(0)	3628511
326	32.2	13.3	1.1	chr7	47640708	47640892	(111705081)	+	MIRb	SINE/MIR	42	252	(16)	3628812
33	2.6	0.0	0.0	chr7	47640919	47640932	(111705041)	+	(GT)n	Simple_repeat	1	14	(0)	3628813
43	0.0	0.0	0.0	chr7	47640933	47640969	(111705004)	+	(GA)n	Simple_repeat	1	37	(0)	3628814
33	2.6	0.0	0.0	chr7	47640970	47640995	(111704978)	+	(GT)n	Simple_repeat	1	26	(0)	3628815
505	19.7	4.3	3.5	chr7	50334305	50335786	(109010187)	+	(TG)n	Simple_repeat	1	1546	(0)	3632259
1260	19.9	15.0	1.6	chr7	51376306	51376673	(107969300)	C	LTR37A	LTR/ERV1	(0)	426	1	3633583
43	11.5	2.7	0.0	chr7	55564225	55564299	(103781674)	+	(CTCT)n	Simple_repeat	1	77	(0)	3638817
938	23.1	8.7	0.3	chr7	65006936	65007218	(94338755)	C	MER33	DNA/hAT-Charlie	(15)	309	1	3647047
231	25.6	14.6	9.3	chr7	65007224	65007411	(94338562)	+	L2a	LINE/L2	1421	1632	(1787)	3647048
2239	11.9	0.0	0.0	chr7	65738920	65739214	(93606759)	C	AluSg	SINE/Alu	(15)	295	1	3648347
51	0.0	0.0	0.0	chr7	65739232	65739275	(93606698)	+	(GA)n	Simple_repeat	1	44	(0)	3648348
1854	13.4	1.4	0.4	chr7	65739283	65739559	(93606414)	+	AluSz6	SINE/Alu	17	296	(16)	3648349
1929	10.5	0.0	11.1	chr7	66705119	66705443	(92640530)	+	AluSz	SINE/Alu	1	289	(23)	3650633
51	0.0	0.0	0.0	chr7	66705444	66705487	(92640486)	+	(AG)n	Simple_repeat	1	44	(0)	3650634
23	14.1	4.2	0.0	chr7	66705488	66705535	(92640438)	+	GA-rich	Low_complexity	1	50	(0)	3650635
313	20.3	1.7	0.0	chr7	66705543	66705601	(92640372)	C	L1MC	LINE/L1	(1812)	4334	4275	3650632
243	33.8	5.2	7.8	chr7	66732858	66733114	(92612859)	+	L2	LINE/L2	2702	2951	(468)	3650692
4075	12.1	4.4	1.3	chr7	67360053	67360307	(91985666)	+	MER41B	LTR/ERV1	1	261	(373)	3652038
4442	10.5	1.4	3.5	chr7	67360308	67360645	(91985328)	+	LTR9D	LTR/ERV1	1	339	(306)	3652039
14	15.4	6.7	2.1	chr7	67438417	67438461	(91907512)	+	(TGTT)n	Simple_repeat	1	48	(0)	3652234
58	4.2	1.4	0.0	chr7	67438591	67438663	(91907310)	+	(GA)n	Simple_repeat	1	74	(0)	3652235
3655	8.9	0.6	0.8	chr7	67937973	67938469	(91407504)	+	LTR3B_	LTR/ERVK	1	496	(3)	3653333
22	0.0	0.0	0.0	chr7	67938473	67938496	(91407477)	+	(TC)n	Simple_repeat	1	24	(0)	3653334
52	0.0	2.1	0.0	chr7	67938497	67938544	(91407429)	+	(TG)n	Simple_repeat	1	49	(0)	3653335
994	8.8	0.0	0.0	chr7	67938647	67938771	(91407202)	+	AluSz6	SINE/Alu	9	133	(179)	3653336
2251	11.9	0.0	0.3	chr7	68724693	68724995	(90620978)	C	AluSx	SINE/Alu	(10)	302	1	3655072
513	20.8	4.4	8.4	chr7	68725017	68725050	(90620923)	+	Tigger2a	DNA/TcMar-Tigger	299	329	(105)	3655073
2170	12.8	12.6	0.8	chr7	68725051	68725427	(90620546)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3655074
394	30.8	2.7	1.4	chr7	69055603	69055750	(90290223)	+	L2a	LINE/L2	2741	2890	(529)	3655825
60	1.8	0.0	0.0	chr7	69055776	69055831	(90290142)	+	(TC)n	Simple_repeat	1	56	(0)	3655826
398	25.1	10.7	14.7	chr7	69055931	69056243	(90289730)	+	L2a	LINE/L2	3128	3426	(0)	3655825
2271	16.5	6.3	3.4	chr7	69533632	69533836	(89812137)	+	MSTB	LTR/ERVL-MaLR	1	228	(198)	3656910
53	0.0	0.0	0.0	chr7	69533837	69533881	(89812092)	+	(CT)n	Simple_repeat	1	45	(0)	3656911
2271	16.5	6.3	3.4	chr7	69533882	69534018	(89811955)	+	MSTB	LTR/ERVL-MaLR	229	364	(62)	3656910
1641	18.8	4.2	2.5	chr7	72243077	72243403	(87102570)	+	MLT1A	LTR/ERVL-MaLR	42	374	(0)	3661911
13	21.1	0.0	6.1	chr7	72925188	72925236	(86420737)	+	(GGCCGG)n	Simple_repeat	1	49	(0)	3663374
1996	12.5	2.9	0.3	chr7	73123455	73123757	(86222216)	C	AluSz	SINE/Alu	(1)	311	1	3663866
69	1.6	0.0	0.0	chr7	73123766	73123828	(86222145)	+	(TC)n	Simple_repeat	1	63	(0)	3663867
981	16.2	10.6	9.9	chr7	73123829	73124081	(86221892)	C	AluJb	SINE/Alu	(56)	256	2	3663868
259	13.1	0.0	0.0	chr7	73156078	73156138	(86189835)	C	PRIMA4-int	LTR/ERV1	(7689)	581	521	3663989
79	3.8	0.0	0.0	chr7	73156139	73156219	(86189754)	+	(CT)n	Simple_repeat	1	81	(0)	3663990
459	18.5	4.0	0.6	chr7	73648321	73649365	(85696608)	+	(CT)n	Simple_repeat	1	1087	(0)	3665149
365	20.6	1.9	2.9	chr7	73793850	73793954	(85552019)	+	ERVL-E-int	LTR/ERVL	3991	4094	(1573)	3665491
806	19.4	2.2	5.3	chr7	73886116	73886239	(85459734)	C	MER5A	DNA/hAT-Charlie	(56)	133	6	3665708
194	22.7	0.0	4.3	chr7	73886247	73886292	(85459681)	+	UCON132b	DNA/hAT-Tip100	103	146	(2)	3665710
53	9.4	0.0	0.0	chr7	73971569	73971647	(85374326)	+	(CTCTCT)n	Simple_repeat	1	79	(0)	3665904
23	36.3	0.8	0.8	chr7	74059896	74060019	(85285954)	+	(TGGTGT)n	Simple_repeat	1	124	(0)	3666084
21	18.3	0.0	0.0	chr7	74174225	74174268	(85171705)	+	(GCGT)n	Simple_repeat	1	44	(0)	3666407
14	12.3	5.4	2.6	chr7	74174287	74174323	(85171650)	+	(GGC)n	Simple_repeat	1	39	(0)	3666408
86	29.7	3.2	0.3	chr7	74371508	74371787	(84974186)	+	GA-rich	Low_complexity	1	289	(0)	3666909
50	0.0	0.0	0.0	chr7	74643845	74643887	(84702086)	+	(AG)n	Simple_repeat	1	43	(0)	3667653
431	11.7	0.0	0.0	chr7	74643960	74644019	(84701954)	+	AluSz6	SINE/Alu	243	302	(10)	3667654
3991	8.2	0.5	0.5	chr7	74650211	74650770	(84695203)	+	Tigger7	DNA/TcMar-Tigger	214	773	(1718)	3667676
586	9.6	9.9	13.9	chr7	74650770	74650927	(84695046)	+	Tigger7	DNA/TcMar-Tigger	2206	2356	(135)	3667677
527	18.1	0.0	0.0	chr7	74650924	74651006	(84694967)	+	MER44C	DNA/TcMar-Tigger	651	733	(0)	3667678
881	12.3	1.9	1.3	chr7	74651028	74651183	(84694790)	C	L1PREC2	LINE/L1	(0)	6160	6004	3667679
39	6.3	0.0	0.0	chr7	74657649	74657698	(84688275)	+	(A)n	Simple_repeat	1	50	(0)	3667694
15	11.6	0.0	3.3	chr7	74657698	74657727	(84688246)	+	(AGG)n	Simple_repeat	1	30	(0)	3667695
2116	12.9	2.9	0.3	chr7	74932276	74932578	(84413395)	C	AluSz	SINE/Alu	(1)	311	1	3668346
47	0.0	0.0	0.0	chr7	74932584	74932623	(84413350)	+	(CT)n	Simple_repeat	1	40	(0)	3668347
1112	15.8	10.6	9.9	chr7	74932624	74932876	(84413097)	C	AluJb	SINE/Alu	(56)	256	2	3668348
38	0.0	0.0	0.0	chr7	74965851	74965883	(84380090)	+	(CA)n	Simple_repeat	1	33	(0)	3668472
28	3.1	0.0	0.0	chr7	74965884	74965916	(84380057)	+	(TC)n	Simple_repeat	1	33	(0)	3668473
48	0.0	0.0	0.0	chr7	75236464	75236504	(84109469)	+	(GA)n	Simple_repeat	1	41	(0)	3669120
33	0.0	0.0	0.0	chr7	75236505	75236540	(84109433)	+	(GT)n	Simple_repeat	1	36	(0)	3669121
1083	15.3	10.8	10.0	chr7	75268597	75268845	(84077128)	+	AluJb	SINE/Alu	6	256	(56)	3669231
57	0.0	0.0	0.0	chr7	75268846	75268894	(84077079)	+	(AG)n	Simple_repeat	1	49	(0)	3669232
2125	12.5	2.9	0.3	chr7	75268903	75269205	(84076768)	+	AluSz	SINE/Alu	1	311	(1)	3669233
2260	9.6	0.0	0.0	chr7	75743054	75743335	(83602638)	C	AluSx1	SINE/Alu	(30)	282	1	3670405
63	6.2	1.1	2.2	chr7	75743339	75743427	(83602546)	+	(TC)n	Simple_repeat	1	90	(0)	3670406
1920	12.5	4.3	0.0	chr7	75793322	75793609	(83552364)	C	AluSz	SINE/Alu	(11)	301	1	3670540
201	32.8	0.0	0.0	chr7	75793631	75793697	(83552276)	C	L2c	LINE/L2	(27)	3360	3294	3670541
103	26.7	2.1	2.6	chr7	75793727	75793948	(83552025)	+	GA-rich	Low_complexity	1	220	(0)	3670542
980	11.0	1.8	3.5	chr7	75804060	75804228	(83541745)	+	Tigger3a	DNA/TcMar-Tigger	35	200	(148)	3670576
1111	14.5	0.0	0.0	chr7	75804229	75804394	(83541579)	C	LTR8	LTR/ERV1	(0)	691	526	3670577
2263	9.1	0.0	1.0	chr7	75804399	75804707	(83541266)	C	AluSx	SINE/Alu	(6)	306	1	3670578
311	18.3	5.0	6.1	chr7	75867146	75867246	(83478727)	+	MER4CL34	LTR/ERV1	1	100	(365)	3670766
27	21.3	0.0	0.0	chr7	75867247	75867306	(83478667)	+	(CTGT)n	Simple_repeat	1	60	(0)	3670767
970	15.5	0.0	2.0	chr7	75867308	75867455	(83478518)	C	FRAM	SINE/Alu	(31)	145	1	3670768
138	31.1	0.0	0.3	chr7	76016110	76016493	(83329480)	+	(AT)n	Simple_repeat	1	384	(0)	3671129
289	4.2	11.1	0.0	chr7	76016507	76016554	(83329419)	+	MLT2A2	LTR/ERVL	508	561	(0)	3671128
2031	15.9	0.0	1.3	chr7	76183622	76183936	(83162037)	C	AluJr	SINE/Alu	(1)	311	1	3671516
1262	21.0	1.4	1.1	chr7	76183939	76184065	(83161908)	+	MLT1D	LTR/ERVL-MaLR	108	236	(269)	3671517
47	2.3	0.0	0.0	chr7	76184066	76184110	(83161863)	+	(AG)n	Simple_repeat	1	45	(0)	3671518
1262	21.0	1.4	1.1	chr7	76184111	76184257	(83161716)	+	MLT1D	LTR/ERVL-MaLR	237	383	(122)	3671517
1950	12.7	3.9	2.6	chr7	76289731	76289996	(83055977)	+	AluSq4	SINE/Alu	1	277	(34)	3671791
46	0.0	2.3	0.0	chr7	76289997	76290039	(83055934)	+	(TC)n	Simple_repeat	1	44	(0)	3671792
1950	12.7	3.9	2.6	chr7	76290040	76290080	(83055893)	+	AluSq4	SINE/Alu	278	311	(0)	3671791
15	24.5	0.0	3.9	chr7	76358446	76358497	(82987476)	+	(CCCGCG)n	Simple_repeat	1	52	(0)	3671937
13	17.6	0.0	2.9	chr7	76358681	76358714	(82987259)	+	GA-rich	Low_complexity	1	34	(0)	3671938
22	3.7	0.0	0.0	chr7	76409298	76409323	(82936650)	+	(CT)n	Simple_repeat	1	26	(0)	3672081
44	10.1	0.0	0.0	chr7	76409324	76409388	(82936585)	+	(CA)n	Simple_repeat	1	65	(0)	3672082
2325	11.9	0.3	0.0	chr7	76422716	76423026	(82922947)	+	AluSx1	SINE/Alu	1	312	(0)	3672129
49	0.0	0.0	0.0	chr7	76423027	76423083	(82922890)	+	(GAAA)n	Simple_repeat	1	57	(0)	3672130
627	13.4	0.0	0.0	chr7	76423084	76423180	(82922793)	C	LTR35A	LTR/ERV1	(34)	513	417	3672127
30	12.3	0.0	0.0	chr7	76423181	76423226	(82922747)	+	(GA)n	Simple_repeat	1	46	(0)	3672131
2528	14.5	2.0	5.0	chr7	76423227	76423639	(82922334)	C	LTR35A	LTR/ERV1	(97)	450	51	3672127
80	1.4	0.0	0.0	chr7	76580348	76580420	(82765553)	+	(AG)n	Simple_repeat	1	73	(0)	3672446
1230	6.6	0.0	6.0	chr7	77436212	77436377	(81909596)	+	AluSx1	SINE/Alu	147	302	(10)	3673761
615	28.9	1.0	0.0	chr7	77436399	77436602	(81909371)	+	L1MC5	LINE/L1	9096	9301	(3)	3673757
1455	17.9	0.0	1.3	chr7	77625243	77625471	(81720502)	C	AluJb	SINE/Alu	(4)	308	83	3674134
79	6.7	0.0	0.0	chr7	77625473	77625566	(81720407)	+	(CT)n	Simple_repeat	1	94	(0)	3674135
2346	12.5	0.7	0.0	chr7	77625567	77625869	(81720104)	C	AluSz	SINE/Alu	(7)	305	1	3674136
47	12.0	1.4	0.0	chr7	77932549	77932622	(81413351)	+	(GA)n	Simple_repeat	1	75	(0)	3674737
33	0.0	0.0	0.0	chr7	77932622	77932657	(81413316)	+	(GT)n	Simple_repeat	1	36	(0)	3674738
52	2.1	0.0	0.0	chr7	84195005	84195053	(75150920)	+	(AG)n	Simple_repeat	1	49	(0)	3683242
40	4.8	0.0	0.0	chr7	84196354	84196396	(75149577)	+	(TC)n	Simple_repeat	1	43	(0)	3683245
221	32.0	4.7	10.2	chr7	84880368	84880387	(74465586)	C	L2a	LINE/L2	(273)	3153	3138	3684103
8455	6.7	15.8	1.6	chr7	84880388	84881736	(74464237)	+	LTR12C	LTR/ERV1	3	1579	(0)	3684104
2128	12.7	13.8	0.5	chr7	86929694	86930064	(72415909)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3686561
4477	9.3	1.4	0.2	chr7	87330749	87331310	(72014663)	C	MER61E	LTR/ERV1	(0)	569	1	3687051
2205	19.5	4.5	3.7	chr7	87367042	87367525	(71978448)	+	MLT1D	LTR/ERVL-MaLR	2	480	(25)	3687101
562	29.1	11.9	0.8	chr7	87367592	87367830	(71978143)	+	L2a	LINE/L2	1586	1854	(1565)	3687100
716	28.1	13.3	5.1	chr7	87367826	87368240	(71977733)	+	L2a	LINE/L2	2683	3135	(291)	3687100
1747	17.6	13.6	1.3	chr7	87501128	87501502	(71844471)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3687267
211	35.8	0.0	0.0	chr7	91103647	91103713	(68242260)	C	MIR3	SINE/MIR	(21)	187	121	3692025
45	2.4	0.0	0.0	chr7	91103826	91103868	(68242105)	+	(GA)n	Simple_repeat	1	43	(0)	3692026
18	22.7	0.0	0.0	chr7	91264494	91264539	(68081434)	+	(GGAGGC)n	Simple_repeat	1	46	(0)	3692227
96	3.3	0.0	0.0	chr7	91618782	91618876	(67727097)	+	(AC)n	Simple_repeat	1	95	(0)	3692673
317	28.0	7.4	2.9	chr7	91618910	91619012	(67726961)	C	MIR3	SINE/MIR	(15)	193	86	3692674
444	28.2	9.5	2.9	chr7	91619028	91619341	(67726632)	+	Plat_L3	LINE/CR1	3143	3479	(107)	3692675
49	4.1	0.0	0.0	chr7	91620758	91620808	(67725165)	+	(CT)n	Simple_repeat	1	51	(0)	3692677
30	0.0	0.0	0.0	chr7	91620809	91620841	(67725132)	+	(AC)n	Simple_repeat	1	33	(0)	3692678
43	5.5	1.8	0.0	chr7	91620841	91620897	(67725076)	+	(AG)n	Simple_repeat	1	58	(0)	3692679
537	31.8	7.9	3.1	chr7	91620924	91621473	(67724500)	+	L2c	LINE/L2	2798	3387	(0)	3692680
1670	20.7	6.4	2.6	chr7	91912766	91913332	(67432641)	C	HAL1	LINE/L1	(1074)	1433	844	3693050
23	0.0	0.0	0.0	chr7	91913342	91913365	(67432608)	+	(TC)n	Simple_repeat	1	24	(0)	3693055
59	1.8	0.0	0.0	chr7	91913366	91913420	(67432553)	+	(TG)n	Simple_repeat	1	55	(0)	3693056
1526	20.6	3.6	1.1	chr7	91913424	91913695	(67432278)	C	AluJb	SINE/Alu	(33)	279	1	3693057
18	4.5	0.0	0.0	chr7	92520747	92520769	(66825204)	+	(AG)n	Simple_repeat	1	23	(0)	3694008
11169	20.2	4.0	1.7	chr7	92876300	92879961	(66466012)	+	L1M3b	LINE/L1	2148	5897	(1665)	3694526
757	14.2	0.0	0.0	chr7	92879961	92880080	(66465893)	+	L1M2	LINE/L1	1	120	(6729)	3694527
44	2.4	0.0	0.0	chr7	92880081	92880122	(66465851)	+	(AG)n	Simple_repeat	1	42	(0)	3694528
775	18.6	0.8	0.1	chr7	92880125	92880270	(66465703)	+	L1M2	LINE/L1	383	640	(6209)	3694527
12819	17.6	8.0	1.1	chr7	92880257	92882976	(66462997)	+	L1MA7	LINE/L1	831	3747	(3815)	3694529
1574	25.1	4.6	7.5	chr7	93217618	93217868	(66128105)	C	L2a	LINE/L2	(0)	3426	3195	3694963
50	2.2	0.0	0.0	chr7	93217869	93217915	(66128058)	+	(TG)n	Simple_repeat	1	47	(0)	3694964
1611	25.4	10.3	3.4	chr7	93217916	93218579	(66127394)	C	L2a	LINE/L2	(232)	3194	2439	3694963
367	36.1	10.6	5.3	chr7	93568309	93568509	(65777464)	+	L2c	LINE/L2	1878	2115	(1304)	3695419
60	1.8	0.0	0.0	chr7	93568510	93568565	(65777408)	+	(TC)n	Simple_repeat	1	56	(0)	3695420
367	36.1	10.6	5.3	chr7	93568566	93569353	(65776620)	+	L2c	LINE/L2	2116	2925	(494)	3695419
301	34.0	7.5	0.6	chr7	93596640	93596819	(65749154)	C	L2c	LINE/L2	(27)	3399	3182	3695459
39	6.3	0.0	0.0	chr7	93597333	93597382	(65748591)	+	(AC)n	Simple_repeat	1	50	(0)	3695460
73	1.5	0.0	0.0	chr7	93597383	93597449	(65748524)	+	(AG)n	Simple_repeat	1	67	(0)	3695461
332	31.2	8.9	5.7	chr7	93597455	93597682	(65748291)	C	L2c	LINE/L2	(891)	2528	2293	3695459
37	6.7	0.0	0.0	chr7	94068834	94068881	(65277092)	+	(GT)n	Simple_repeat	1	48	(0)	3696111
44	0.0	0.0	0.0	chr7	94068882	94068919	(65277054)	+	(GA)n	Simple_repeat	1	38	(0)	3696112
13	0.0	0.0	0.0	chr7	94068921	94068937	(65277036)	+	(AGG)n	Simple_repeat	1	17	(0)	3696113
16	18.4	4.7	0.0	chr7	94069020	94069062	(65276911)	+	GA-rich	Low_complexity	1	45	(0)	3696114
44	0.0	0.0	0.0	chr7	94301662	94301699	(65044274)	+	(TG)n	Simple_repeat	1	38	(0)	3696423
42	21.7	5.5	0.7	chr7	94301700	94301827	(65044146)	+	GA-rich	Low_complexity	1	135	(0)	3696424
848	19.5	3.5	0.6	chr7	94381483	94381647	(64964326)	+	MLT1A	LTR/ERVL-MaLR	5	174	(200)	3696551
44	6.3	0.0	0.0	chr7	94381649	94381699	(64964274)	+	(TC)n	Simple_repeat	1	51	(0)	3696552
555	20.3	7.1	0.0	chr7	94381713	94381830	(64964143)	+	MLT1A	LTR/ERVL-MaLR	237	363	(11)	3696551
260	30.7	4.3	0.0	chr7	94381856	94381943	(64964030)	+	L2c	LINE/L2	3131	3222	(165)	3696550
51	0.0	0.0	0.0	chr7	96128753	96128798	(63217175)	+	(ATA)n	Simple_repeat	1	46	(0)	3698905
1322	19.4	12.7	3.5	chr7	96128898	96128939	(63217034)	+	MLT1F	LTR/ERVL-MaLR	141	188	(360)	3698906
50	0.0	0.0	0.0	chr7	96128940	96128982	(63216991)	+	(CT)n	Simple_repeat	1	43	(0)	3698907
1322	19.4	12.7	3.5	chr7	96128983	96129308	(63216665)	+	MLT1F	LTR/ERVL-MaLR	189	548	(0)	3698906
188	37.0	5.4	6.2	chr7	96236334	96236575	(63109398)	C	L2c	LINE/L2	(52)	3335	3096	3699057
25	0.0	0.0	0.0	chr7	97653868	97653895	(61692078)	+	(AC)n	Simple_repeat	1	28	(0)	3701105
57	0.0	0.0	0.0	chr7	97653896	97653944	(61692029)	+	(AG)n	Simple_repeat	1	49	(0)	3701106
56	10.2	0.0	0.0	chr7	97734434	97734517	(61611456)	+	(TC)n	Simple_repeat	1	84	(0)	3701216
767	7.9	3.4	2.6	chr7	99242679	99242795	(60103178)	+	HY1	scRNA	1	118	(1)	3704278
309	32.6	5.9	7.3	chr7	99242980	99243184	(60102789)	C	MIRc	SINE/MIR	(30)	238	37	3704279
46	0.0	0.0	0.0	chr7	99277879	99277917	(60068056)	+	(GT)n	Simple_repeat	1	39	(0)	3704358
16	0.0	0.0	0.0	chr7	99277918	99277935	(60068038)	+	(AG)n	Simple_repeat	1	18	(0)	3704359
46	0.0	0.0	0.0	chr7	99277936	99277977	(60067996)	+	(AGAC)n	Simple_repeat	1	42	(0)	3704360
1648	13.6	5.7	0.0	chr7	99277979	99278242	(60067731)	C	AluJr	SINE/Alu	(32)	280	1	3704361
2244	1.6	0.0	1.1	chr7	99832447	99832706	(59513267)	+	L1PA4	LINE/L1	5899	6155	(0)	3705356
1628	14.2	14.5	11.8	chr7	99832707	99832943	(59513030)	+	MSTA	LTR/ERVL-MaLR	194	428	(0)	3705355
8157	4.9	0.4	4.3	chr7	99978515	99979562	(59366411)	+	LTR13	LTR/ERVK	1	1007	(0)	3705591
3539	11.0	2.2	3.4	chr7	100082616	100083179	(59262794)	+	LTR43	LTR/ERV1	2	558	(44)	3705823
20	16.7	0.0	0.0	chr7	100083183	100083216	(59262757)	+	(T)n	Simple_repeat	1	34	(0)	3705824
1049	16.2	16.7	1.2	chr7	100126360	100126512	(59219461)	+	AluJo	SINE/Alu	126	294	(18)	3705907
1668	15.7	0.0	4.7	chr7	100126513	100126811	(59219162)	+	AluJr	SINE/Alu	1	285	(27)	3705910
1579	15.3	4.5	7.2	chr7	100148165	100148485	(59197488)	C	AluJr	SINE/Alu	(0)	312	1	3705967
6958	11.7	1.6	2.2	chr7	100344758	100345770	(59000203)	C	LTR13	LTR/ERVK	(0)	1007	1	3706402
27	6.1	0.0	0.0	chr7	100478316	100478350	(58867623)	+	(AG)n	Simple_repeat	1	35	(0)	3706675
60	0.0	0.0	0.0	chr7	100478351	100478401	(58867572)	+	(GT)n	Simple_repeat	1	51	(0)	3706676
15	18.5	4.7	0.0	chr7	100626715	100626757	(58719216)	+	G-rich	Low_complexity	1	45	(0)	3706987
45	2.3	0.0	0.0	chr7	100673816	100673860	(58672113)	+	(CGC)n	Simple_repeat	1	45	(0)	3707120
21	26.0	1.1	5.6	chr7	100966807	100966837	(58379136)	+	(CCCT)n	Simple_repeat	1	67	(19)	3707728
17	19.2	1.9	3.8	chr7	100966838	100966889	(58379084)	+	(CCCCT)n	Simple_repeat	1	53	(0)	3707729
21	26.0	1.1	5.6	chr7	100966890	100966896	(58379077)	+	(CCCT)n	Simple_repeat	68	86	(0)	3707728
19	18.4	4.1	0.0	chr7	101059047	101059095	(58286878)	+	(AGAC)n	Simple_repeat	1	51	(0)	3707871
51	0.0	0.0	0.0	chr7	101059107	101059150	(58286823)	+	(GA)n	Simple_repeat	1	44	(0)	3707872
302	32.6	9.3	2.0	chr7	101059237	101059386	(58286587)	+	MIR3	SINE/MIR	44	205	(3)	3707873
20	21.4	2.8	4.1	chr7	101085609	101085679	(58260294)	+	G-rich	Low_complexity	1	73	(0)	3707964
1881	15.6	4.5	0.0	chr7	101112963	101113257	(58232716)	+	AluSz6	SINE/Alu	2	310	(2)	3708018
96	11.3	0.0	3.0	chr7	101113260	101113424	(58232549)	+	(GAAA)n	Simple_repeat	1	165	(0)	3708019
2173	14.8	0.0	0.0	chr7	101113435	101113745	(58232228)	+	AluSx	SINE/Alu	2	312	(0)	3708020
24	17.9	0.0	0.0	chr7	101122180	101122223	(58223750)	+	GA-rich	Low_complexity	1	44	(0)	3708043
19	23.7	1.6	3.1	chr7	101122295	101122398	(58223575)	+	A-rich	Low_complexity	1	102	(0)	3708044
725	7.1	4.0	1.0	chr7	101138804	101138901	(58207072)	+	AluJo	SINE/Alu	24	124	(188)	3708076
24	16.3	2.0	2.0	chr7	101169233	101169282	(58176691)	+	GA-rich	Low_complexity	1	51	(0)	3708149
37	8.5	0.0	0.0	chr7	101169298	101169347	(58176626)	+	(AC)n	Simple_repeat	1	50	(0)	3708150
190	33.3	0.0	0.0	chr7	101217552	101217611	(58128362)	C	MIR3	SINE/MIR	(49)	159	100	3708258
8071	6.4	0.6	0.4	chr7	101309222	101310226	(58035747)	C	LTR13	LTR/ERVK	(0)	1007	1	3708476
240	37.3	1.2	1.9	chr7	101414122	101414282	(57931691)	C	UCON15	Unknown	(9)	338	179	3708749
29	9.6	0.0	0.0	chr7	101414382	101414426	(57931547)	+	(CTCT)n	Simple_repeat	1	45	(0)	3708750
33	3.1	0.0	0.0	chr7	101414427	101414459	(57931514)	+	(TG)n	Simple_repeat	1	33	(0)	3708751
2115	10.1	0.4	0.0	chr7	101414460	101414735	(57931238)	C	AluSx1	SINE/Alu	(34)	278	2	3708752
186	27.3	5.0	2.8	chr7	101903049	101903135	(57442838)	+	MIR3	SINE/MIR	95	184	(84)	3709901
1897	16.4	9.4	5.7	chr7	102268587	102268940	(57077033)	C	MSTB	LTR/ERVL-MaLR	(0)	426	52	3710626
13	5.3	0.0	0.0	chr7	102396676	102396695	(56949278)	+	(GGA)n	Simple_repeat	1	20	(0)	3710915
5282	11.4	3.4	1.5	chr7	103023313	103024135	(56321838)	+	L1PA15	LINE/L1	5836	6682	(10)	3712078
60	0.0	0.0	0.0	chr7	103024136	103024186	(56321787)	+	(AG)n	Simple_repeat	1	51	(0)	3712087
2477	7.5	0.3	0.7	chr7	103024246	103024552	(56321421)	+	AluSq	SINE/Alu	2	307	(6)	3712088
399	30.4	7.1	11.1	chr7	103524985	103525454	(55820519)	+	L2c	LINE/L2	2921	3370	(17)	3712858
19	0.0	0.0	0.0	chr7	103658804	103658824	(55687149)	+	(TC)n	Simple_repeat	1	21	(0)	3713022
44	2.4	0.0	0.0	chr7	104015400	104015441	(55330532)	+	(GA)n	Simple_repeat	1	42	(0)	3713513
40	0.0	0.0	0.0	chr7	104403726	104403759	(54942214)	+	(TC)n	Simple_repeat	1	34	(0)	3714111
1374	22.3	7.4	0.3	chr7	104403819	104404133	(54941840)	+	MER58B	DNA/hAT-Charlie	3	341	(0)	3714112
14	25.5	3.1	3.0	chr7	104841985	104842006	(54503967)	+	(TCCTC)n	Simple_repeat	1	40	(26)	3714685
15	7.5	3.3	3.2	chr7	104842007	104842036	(54503937)	+	(CTC)n	Simple_repeat	1	31	(0)	3714686
14	25.5	3.1	3.0	chr7	104842037	104842048	(54503925)	+	(TCCTC)n	Simple_repeat	41	66	(0)	3714685
273	40.8	0.0	0.0	chr7	104884441	104884543	(54461430)	+	MER5A	DNA/hAT-Charlie	87	189	(0)	3714745
413	31.3	7.0	4.1	chr7	105198693	105198910	(54147063)	C	MIR	SINE/MIR	(6)	256	31	3715310
517	25.6	18.4	0.6	chr7	106029344	106029512	(53316461)	+	MIRc	SINE/MIR	55	260	(8)	3716986
37	2.8	0.0	0.0	chr7	106029544	106029579	(53316394)	+	(CT)n	Simple_repeat	1	36	(0)	3716987
35	25.8	2.4	5.8	chr7	106112281	106112449	(53233524)	+	G-rich	Low_complexity	1	173	(0)	3717117
16	25.7	5.2	2.1	chr7	106424777	106424850	(52921123)	+	A-rich	Low_complexity	1	76	(0)	3717567
19	4.3	0.0	0.0	chr7	106424883	106424906	(52921067)	+	(TC)n	Simple_repeat	1	24	(0)	3717568
1028	20.9	8.9	5.0	chr7	106470554	106470975	(52874998)	C	LTR37B	LTR/ERV1	(0)	468	29	3717622
1318	27.5	6.0	8.6	chr7	106470984	106471449	(52874524)	+	L2	LINE/L2	1207	1659	(1760)	3717615
16	4.5	0.0	0.0	chr7	106492622	106492644	(52853329)	+	(GAGG)n	Simple_repeat	1	23	(0)	3717653
58	1.9	0.0	0.0	chr7	106492677	106492730	(52853243)	+	(TC)n	Simple_repeat	1	54	(0)	3717654
23	0.0	0.0	0.0	chr7	106524117	106524141	(52821832)	+	(AG)n	Simple_repeat	1	25	(0)	3717702
47	0.0	0.0	0.0	chr7	106524142	106524181	(52821792)	+	(GT)n	Simple_repeat	1	40	(0)	3717703
2508	6.7	0.7	0.0	chr7	106524183	106524479	(52821494)	C	AluSx1	SINE/Alu	(13)	299	1	3717704
1422	26.5	3.0	1.3	chr7	106719371	106719767	(52626206)	C	Kanga1a	DNA/TcMar-Tc2	(322)	432	29	3717960
438	32.5	16.5	1.6	chr7	106719810	106720194	(52625779)	C	L2	LINE/L2	(652)	2767	2314	3717961
4320	10.9	4.0	3.0	chr7	106767153	106767852	(52578121)	C	LTR62	LTR/ERVL	(2)	707	1	3718033
296	34.9	11.4	2.7	chr7	106767859	106767985	(52577988)	C	MIRc	SINE/MIR	(20)	248	97	3718034
2254	14.0	6.2	0.3	chr7	106767986	106768364	(52577609)	+	MER57B2	LTR/ERV1	1	403	(0)	3718035
15	7.6	3.6	0.0	chr7	106778703	106778730	(52567243)	+	(TTTGT)n	Simple_repeat	1	29	(0)	3718055
17	17.0	0.0	2.9	chr7	106778780	106778814	(52567159)	+	GA-rich	Low_complexity	1	35	(0)	3718056
1252	23.6	3.6	13.9	chr7	106784130	106784562	(52561411)	+	MLT1B	LTR/ERVL-MaLR	4	390	(0)	3718066
7867	22.5	6.0	4.8	chr7	106784563	106785058	(52560915)	C	Charlie2b	DNA/hAT-Charlie	(1655)	1127	615	3718064
256	34.4	4.6	2.3	chr7	106794171	106794298	(52551675)	C	MIR	SINE/MIR	(83)	179	49	3718090
728	24.9	8.9	0.0	chr7	106794411	106794615	(52551358)	C	LTR16A	LTR/ERVL	(224)	227	3	3718091
1474	24.6	10.9	5.8	chr7	106811328	106811720	(52534253)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	92	3718114
37	0.0	0.0	0.0	chr7	106811721	106811754	(52534219)	+	(TTGT)n	Simple_repeat	1	34	(0)	3718115
1474	24.6	10.9	5.8	chr7	106811755	106811844	(52534129)	C	MLT1J	LTR/ERVL-MaLR	(421)	91	1	3718114
260	25.4	2.9	0.0	chr7	106811859	106811925	(52534048)	+	L1M6B	LINE/L1	161	229	(140)	3718116
290	21.3	6.2	8.5	chr7	106812506	106812587	(52533386)	C	MamTip3	DNA/hAT-Tip100	(419)	81	2	3718118
2368	18.6	5.8	7.6	chr7	106815882	106816091	(52529882)	+	MLT2B3	LTR/ERVL	1	217	(337)	3718125
44	2.4	0.0	0.0	chr7	106816092	106816133	(52529840)	+	(TC)n	Simple_repeat	1	42	(0)	3718126
2368	18.6	5.8	7.6	chr7	106816134	106816451	(52529522)	+	MLT2B3	LTR/ERVL	218	519	(35)	3718125
22712	7.6	0.5	0.3	chr7	106918809	106924960	(52421013)	+	L1PA6	LINE/L1	5	6154	(0)	3718267
23	24.4	1.4	4.0	chr7	106925124	106925196	(52420777)	+	(TC)n	Simple_repeat	1	74	(0)	3718268
2102	15.8	0.7	0.0	chr7	107025377	107025673	(52320300)	+	AluJo	SINE/Alu	7	305	(7)	3718478
24	14.4	0.0	0.0	chr7	107115653	107115691	(52230282)	+	(AG)n	Simple_repeat	1	39	(0)	3718616
579	29.3	16.0	5.2	chr7	107115726	107116088	(52229885)	+	MLT1I	LTR/ERVL-MaLR	3	404	(7)	3718617
30	0.0	0.0	0.0	chr7	107258426	107258451	(52087522)	+	(TC)n	Simple_repeat	1	26	(0)	3718810
24	3.6	0.0	0.0	chr7	107258452	107258480	(52087493)	+	(AC)n	Simple_repeat	1	29	(0)	3718811
1144	20.3	0.0	3.3	chr7	107260983	107261196	(52084777)	C	MER8	DNA/TcMar-Tigger	(1)	238	32	3718816
616	21.1	8.4	12.7	chr7	107261201	107261499	(52084474)	C	L1MC4	LINE/L1	(14)	8028	7744	3718817
15	24.1	0.0	0.0	chr7	108246414	108246447	(51099526)	+	GA-rich	Low_complexity	1	34	(0)	3720271
708	25.3	9.6	1.2	chr7	108526799	108527038	(50818935)	+	MER58B	DNA/hAT-Charlie	9	270	(71)	3720665
1716	17.8	3.6	9.6	chr7	108635070	108635485	(50710488)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	3720829
44	2.1	2.0	2.0	chr7	111217078	111217127	(48128846)	+	(TC)n	Simple_repeat	1	51	(0)	3724031
30	0.0	0.0	0.0	chr7	111217128	111217160	(48128813)	+	(AC)n	Simple_repeat	1	33	(0)	3724032
12	29.0	2.0	0.0	chr7	111562247	111562296	(47783677)	+	(CACGCG)n	Simple_repeat	1	51	(0)	3724507
962	26.3	7.7	0.0	chr7	112398509	112398797	(46947176)	+	LTR33	LTR/ERVL	1	313	(202)	3725741
275	34.4	5.2	4.7	chr7	112398914	112399084	(46946889)	C	L2	LINE/L2	(1025)	2394	2223	3725740
12	24.4	2.6	0.0	chr7	112450737	112450775	(46895198)	+	(GGC)n	Simple_repeat	1	40	(0)	3725834
1485	16.1	2.2	3.3	chr7	112452156	112452428	(46893545)	C	AluJr	SINE/Alu	(14)	298	29	3725835
673	32.9	8.0	4.4	chr7	112503029	112503766	(46842207)	C	L2b	LINE/L2	(233)	3154	2374	3725907
1658	15.7	7.3	1.6	chr7	113103146	113103314	(46242659)	C	MLT1A0	LTR/ERVL-MaLR	(15)	350	162	3726705
54	1.9	1.9	0.0	chr7	113103315	113103368	(46242605)	+	(AG)n	Simple_repeat	1	55	(0)	3726706
1658	15.7	7.3	1.6	chr7	113103369	113103521	(46242452)	C	MLT1A0	LTR/ERVL-MaLR	(204)	161	9	3726705
49	4.1	0.0	0.0	chr7	113150219	113150269	(46195704)	+	(TC)n	Simple_repeat	1	51	(0)	3726774
197	37.9	3.4	4.7	chr7	113412782	113412913	(45933060)	C	L2c	LINE/L2	(38)	3349	3189	3727095
1696	21.7	9.8	4.2	chr7	113412998	113413031	(45932942)	C	MLT2B1	LTR/ERVL	(19)	501	466	3727096
40	0.0	0.0	0.0	chr7	113413032	113413065	(45932908)	+	(CA)n	Simple_repeat	1	34	(0)	3727097
36	0.0	0.0	0.0	chr7	113413069	113413099	(45932874)	+	(GA)n	Simple_repeat	1	31	(0)	3727098
1696	21.7	9.8	4.2	chr7	113413100	113413532	(45932441)	C	MLT2B1	LTR/ERVL	(57)	463	1	3727096
16	19.2	0.0	0.0	chr7	116430286	116430315	(42915658)	+	(CT)n	Simple_repeat	1	30	(0)	3731032
117	11.5	0.0	0.0	chr7	116430319	116430507	(42915466)	+	(TC)n	Simple_repeat	1	189	(0)	3731033
28	12.9	0.0	0.0	chr7	116430570	116430612	(42915361)	+	(A)n	Simple_repeat	1	43	(0)	3731034
552	28.9	1.1	3.4	chr7	116440517	116440695	(42905278)	C	MIR	SINE/MIR	(0)	262	88	3731048
4547	26.0	5.0	4.8	chr7	116461806	116462738	(42883235)	+	L1M5	LINE/L1	3692	4644	(1502)	3731073
33	0.0	0.0	0.0	chr7	116462739	116462766	(42883207)	+	(CA)n	Simple_repeat	1	28	(0)	3731074
4547	25.4	4.3	5.5	chr7	116462767	116463557	(42882416)	+	L1M5	LINE/L1	4645	5420	(744)	3731073
17	0.0	0.0	0.0	chr7	116466398	116466416	(42879557)	+	(TG)n	Simple_repeat	1	19	(0)	3731077
55	1.8	1.8	0.0	chr7	116466417	116466471	(42879502)	+	(GA)n	Simple_repeat	1	56	(0)	3731078
1788	17.1	0.0	0.7	chr7	116715970	116716250	(42629723)	+	AluJb	SINE/Alu	2	280	(32)	3731456
115	19.8	2.5	1.4	chr7	116716251	116716276	(42629697)	+	GA-rich	Low_complexity	17	42	(0)	3731457
67	1.6	0.0	0.0	chr7	116716277	116716338	(42629635)	+	(GA)n	Simple_repeat	1	62	(0)	3731458
115	19.8	2.5	1.4	chr7	116716339	116716569	(42629404)	+	GA-rich	Low_complexity	43	279	(0)	3731459
26387	2.0	0.5	0.0	chr7	116718498	116724489	(42621484)	C	L1PA2	LINE/L1	(6)	6149	130	3731463
2046	12.9	12.7	1.1	chr7	116840344	116840719	(42505254)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	3731617
486	30.0	11.1	5.0	chr7	117152326	117152662	(42193311)	C	HAL1ME	LINE/L1	(2092)	373	14	3732165
759	31.0	5.1	4.0	chr7	117152676	117153021	(42192952)	C	MamGyp-int	LTR/Gypsy	(2762)	2341	1992	3732159
16	15.8	0.0	2.7	chr7	117819331	117819367	(41526606)	+	(TTCTCT)n	Simple_repeat	1	37	(0)	3733052
55	0.0	0.0	0.0	chr7	117819368	117819414	(41526559)	+	(CA)n	Simple_repeat	1	47	(0)	3733053
55	0.0	0.0	0.0	chr7	118462691	118462737	(40883236)	+	(AC)n	Simple_repeat	1	47	(0)	3733943
33	0.0	0.0	0.0	chr7	118462738	118462773	(40883200)	+	(GA)n	Simple_repeat	1	36	(0)	3733944
888	33.1	7.0	6.7	chr7	118462895	118463871	(40882102)	+	ERV3-16A3_I-int	LTR/ERVL	3902	4882	(344)	3733945
1386	29.8	11.4	2.0	chr7	119830680	119831447	(39514526)	C	L1ME2	LINE/L1	(2028)	4118	3249	3735624
19	18.1	0.0	0.0	chr7	119831448	119831457	(39514516)	+	(TC)n	Simple_repeat	1	10	(0)	3735627
57	1.9	0.0	0.0	chr7	119831458	119831510	(39514463)	+	(TG)n	Simple_repeat	1	53	(0)	3735628
19	18.1	0.0	0.0	chr7	119831511	119831538	(39514435)	+	(TC)n	Simple_repeat	1	28	(0)	3735629
1369	19.2	7.5	0.4	chr7	120862993	120863252	(38482721)	+	AluJr	SINE/Alu	3	282	(30)	3736930
17	8.3	0.0	0.0	chr7	120863270	120863295	(38482678)	+	(AAC)n	Simple_repeat	1	26	(0)	3736931
16138	14.5	1.6	2.2	chr7	121075711	121075977	(38269996)	C	Tigger2	DNA/TcMar-Tigger	(2448)	270	2	3737198
309	28.8	7.1	8.9	chr7	121075978	121076110	(38269863)	+	L2c	LINE/L2	3252	3381	(6)	3737193
260	25.0	5.9	0.0	chr7	121076654	121076717	(38269256)	C	MamTip3	DNA/hAT-Tip100	(398)	102	35	3737200
19	14.5	0.0	0.0	chr7	121080711	121080741	(38265232)	+	(AC)n	Simple_repeat	1	31	(0)	3737205
18	17.7	0.0	0.0	chr7	121080741	121080772	(38265201)	+	GA-rich	Low_complexity	1	32	(0)	3737206
25	13.3	0.0	5.4	chr7	121160203	121160258	(38185715)	+	(CATTA)n	Simple_repeat	1	56	(0)	3737319
980	33.1	9.1	2.7	chr7	121515630	121516181	(37829792)	+	L2	LINE/L2	2418	3008	(411)	3737800
53	0.0	0.0	0.0	chr7	122315275	122315319	(37030654)	+	(CT)n	Simple_repeat	1	45	(0)	3738939
46	4.3	0.0	0.0	chr7	123660277	123660324	(35685649)	+	(TC)n	Simple_repeat	1	48	(0)	3740776
22	7.3	0.0	0.0	chr7	123660325	123660353	(35685620)	+	(AC)n	Simple_repeat	1	29	(0)	3740777
324	14.6	0.0	3.8	chr7	123789710	123789780	(35556193)	C	MLT2D	LTR/ERVL	(0)	567	489	3740972
14	18.7	0.0	0.0	chr7	123789812	123789843	(35556130)	+	(ATGTGT)n	Simple_repeat	1	32	(0)	3740973
20	29.0	0.0	0.0	chr7	123789857	123789919	(35556054)	+	GA-rich	Low_complexity	1	63	(0)	3740974
914	20.5	3.2	2.3	chr7	123789924	123790138	(35555835)	C	MLT2D	LTR/ERVL	(48)	366	150	3740972
61	5.4	0.0	0.0	chr7	125052791	125052867	(34293106)	+	(AG)n	Simple_repeat	1	77	(0)	3742656
2228	10.4	0.0	0.0	chr7	125052868	125053146	(34292827)	C	AluSx4	SINE/Alu	(30)	280	2	3742657
536	30.3	10.7	6.0	chr7	125603040	125603288	(33742685)	+	MLT1H1	LTR/ERVL-MaLR	5	266	(289)	3743352
50	10.3	2.3	2.2	chr7	125603328	125603414	(33742559)	+	(AG)n	Simple_repeat	1	89	(0)	3743353
396	26.0	10.9	6.8	chr7	125603428	125603646	(33742327)	+	MLT1H1	LTR/ERVL-MaLR	327	555	(0)	3743352
565	18.6	0.0	1.0	chr7	126655370	126655467	(32690506)	+	MSTA	LTR/ERVL-MaLR	1	97	(331)	3744707
261	16.5	18.6	1.2	chr7	126655467	126655546	(32690427)	C	LTR28B	LTR/ERV1	(668)	306	210	3744708
272	9.3	6.5	0.0	chr7	126655509	126655551	(32690422)	+	THE1D	LTR/ERVL-MaLR	334	379	(2)	3744709
1317	20.7	10.6	15.1	chr7	127336301	127336691	(32009282)	C	MLT1D	LTR/ERVL-MaLR	(92)	413	2	3745589
423	32.6	8.6	2.6	chr7	127336692	127336821	(32009152)	+	LTR78	LTR/ERV1	382	530	(774)	3745588
54	0.0	0.0	0.0	chr7	127336825	127336870	(32009103)	+	(GA)n	Simple_repeat	1	46	(0)	3745591
279	27.2	5.2	1.1	chr7	127336971	127337063	(32008910)	+	MER5C1	DNA/hAT-Charlie	3	99	(164)	3745592
15	12.0	3.7	0.0	chr7	127378705	127378731	(31967242)	+	(CA)n	Simple_repeat	1	28	(0)	3745646
17	5.0	0.0	0.0	chr7	127378731	127378751	(31967222)	+	(AG)n	Simple_repeat	1	21	(0)	3745647
215	32.5	3.5	1.2	chr7	127378832	127378915	(31967058)	+	MIR	SINE/MIR	58	143	(119)	3745648
18	12.2	0.0	0.0	chr7	127379834	127379860	(31966113)	+	(C)n	Simple_repeat	1	27	(0)	3745649
32	3.2	0.0	0.0	chr7	127379871	127379902	(31966071)	+	(AG)n	Simple_repeat	1	32	(0)	3745650
508	33.2	8.3	7.7	chr7	127379921	127380325	(31965648)	+	L2c	LINE/L2	2975	3382	(5)	3745651
2362	10.4	4.7	0.9	chr7	127481188	127481537	(31864436)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3745802
43	0.0	0.0	0.0	chr7	127481538	127481574	(31864399)	+	(AC)n	Simple_repeat	1	37	(0)	3745803
2784	28.2	10.3	3.7	chr7	127481575	127482891	(31863082)	+	L1MEd	LINE/L1	731	2140	(4963)	3745801
34	0.0	0.0	0.0	chr7	128348700	128348728	(30997245)	+	(GT)n	Simple_repeat	1	29	(0)	3747051
19	0.0	0.0	0.0	chr7	128348729	128348749	(30997224)	+	(AG)n	Simple_repeat	1	21	(0)	3747052
15	0.0	0.0	0.0	chr7	128360988	128361004	(30984969)	+	(CA)n	Simple_repeat	1	17	(0)	3747073
25	3.4	0.0	0.0	chr7	128361074	128361103	(30984870)	+	(CT)n	Simple_repeat	1	30	(0)	3747074
43	0.0	0.0	0.0	chr7	128361104	128361140	(30984833)	+	(CA)n	Simple_repeat	1	37	(0)	3747075
31	31.6	2.4	0.8	chr7	128361162	128361284	(30984689)	+	(CA)n	Simple_repeat	1	126	(0)	3747075
1863	13.2	3.9	0.4	chr7	128705656	128705954	(30640019)	C	AluJr	SINE/Alu	(0)	312	1	3747832
3294	23.9	2.7	4.9	chr7	128705955	128706665	(30639308)	C	L1MC4	LINE/L1	(884)	7158	6464	3747831
412	31.2	13.5	2.4	chr7	128738496	128738869	(30607104)	C	L2c	LINE/L2	(48)	3339	2918	3747900
12	13.7	0.0	0.0	chr7	128783387	128783410	(30562563)	+	(CTG)n	Simple_repeat	1	24	(0)	3747962
653	0.0	0.0	0.0	chr7	128783450	128783521	(30562452)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	3747963
14	16.6	2.3	4.4	chr7	128830388	128830431	(30515542)	+	(CCCGG)n	Simple_repeat	1	45	(0)	3748032
12	21.0	5.1	0.0	chr7	128830473	128830511	(30515462)	+	(GCCGC)n	Simple_repeat	1	41	(0)	3748033
16	21.1	4.1	0.0	chr7	128830589	128830637	(30515336)	+	(AGCCCC)n	Simple_repeat	1	51	(0)	3748034
26	18.8	2.9	1.4	chr7	128860480	128860547	(30485426)	+	(CCCTCA)n	Simple_repeat	1	70	(0)	3748060
1334	12.1	1.8	19.9	chr7	129171801	129172146	(30173827)	+	AluJr	SINE/Alu	1	282	(30)	3748642
15	0.0	0.0	0.0	chr7	129172147	129172163	(30173810)	+	(TC)n	Simple_repeat	1	17	(0)	3748643
42	0.0	0.0	0.0	chr7	129172164	129172199	(30173774)	+	(CA)n	Simple_repeat	1	36	(0)	3748644
31	29.5	2.4	1.5	chr7	129224897	129225023	(30120950)	+	G-rich	Low_complexity	1	130	(0)	3748759
12	19.6	2.9	0.0	chr7	129432868	129432902	(29913071)	+	GA-rich	Low_complexity	1	36	(0)	3749133
15	5.5	0.0	0.0	chr7	129433013	129433031	(29912942)	+	(AG)n	Simple_repeat	1	19	(0)	3749134
204	34.5	7.4	3.9	chr7	129433164	129433344	(29912629)	C	L2c	LINE/L2	(207)	3180	2993	3749135
38	0.0	0.0	0.0	chr7	129683289	129683321	(29662652)	+	(GT)n	Simple_repeat	1	33	(0)	3749661
25	0.0	0.0	0.0	chr7	129683322	129683346	(29662627)	+	(GA)n	Simple_repeat	1	25	(0)	3749662
2066	13.1	0.0	0.3	chr7	129683348	129683629	(29662344)	C	AluSx	SINE/Alu	(31)	281	1	3749663
910	24.5	7.9	6.8	chr7	129824681	129825091	(29520882)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	143	3749923
16	24.7	0.0	0.0	chr7	129825231	129825265	(29520708)	+	(TC)n	Simple_repeat	1	35	(0)	3749924
24	30.2	0.0	0.0	chr7	129832435	129832503	(29513470)	+	(CA)n	Simple_repeat	1	69	(0)	3749935
313	25.5	12.4	0.7	chr7	129979634	129979775	(29366198)	+	L2	LINE/L2	2410	2570	(849)	3750252
44	0.0	0.0	0.0	chr7	129979882	129979919	(29366054)	+	(TC)n	Simple_repeat	1	38	(0)	3750253
2031	8.9	0.8	0.0	chr7	129979999	129980257	(29365716)	+	AluSz	SINE/Alu	44	304	(8)	3750254
237	18.7	7.4	3.9	chr7	130135981	130136058	(29209915)	C	LTR85b	LTR/Gypsy?	(250)	534	454	3750650
2238	12.9	0.3	0.0	chr7	130248043	130248353	(29097620)	+	AluSz	SINE/Alu	1	312	(0)	3750853
19	14.3	2.6	0.0	chr7	130248388	130248426	(29097547)	+	(AACAA)n	Simple_repeat	1	40	(0)	3750854
31	3.3	0.0	0.0	chr7	130248526	130248556	(29097417)	+	(TC)n	Simple_repeat	1	31	(0)	3750855
2394	12.2	16.5	0.0	chr7	131000002	131000427	(28345546)	+	LTR54	LTR/ERV1	1	510	(0)	3751947
40	16.3	0.0	0.0	chr7	131235173	131235257	(28110716)	+	(TCTCTC)n	Simple_repeat	1	85	(0)	3752425
15	5.6	0.0	0.0	chr7	131235296	131235314	(28110659)	+	(TG)n	Simple_repeat	1	19	(0)	3752426
31	3.3	0.0	0.0	chr7	131235315	131235345	(28110628)	+	(GA)n	Simple_repeat	1	31	(0)	3752427
6022	18.6	2.7	2.8	chr7	131752745	131753616	(27592357)	C	L1MC1	LINE/L1	(1250)	4896	4018	3753398
15	5.6	0.0	0.0	chr7	131753628	131753646	(27592327)	+	(T)n	Simple_repeat	1	19	(0)	3753401
22	0.0	0.0	0.0	chr7	131753721	131753744	(27592229)	+	(TC)n	Simple_repeat	1	24	(0)	3753402
4157	7.1	1.1	0.0	chr7	132115243	132115790	(27230183)	+	MER41A	LTR/ERV1	1	554	(0)	3753948
25	9.1	0.0	0.0	chr7	132115817	132115851	(27230122)	+	(AG)n	Simple_repeat	1	35	(0)	3753949
365	33.0	4.4	3.0	chr7	132115871	132116070	(27229903)	+	MIR	SINE/MIR	3	205	(57)	3753950
20	4.2	0.0	0.0	chr7	132557926	132557950	(26788023)	+	(AG)n	Simple_repeat	1	25	(0)	3754573
234	30.6	6.9	2.7	chr7	132557965	132558075	(26787898)	C	L2c	LINE/L2	(38)	3349	3234	3754574
21	15.8	0.0	0.0	chr7	132615782	132615817	(26730156)	+	(CA)n	Simple_repeat	1	36	(0)	3754659
30	16.6	0.0	1.6	chr7	132615832	132615894	(26730079)	+	(CCCTCTC)n	Simple_repeat	1	63	(0)	3754660
43	0.0	0.0	0.0	chr7	132615928	132615964	(26730009)	+	(TC)n	Simple_repeat	1	37	(0)	3754661
402	19.5	8.1	3.4	chr7	132711226	132711342	(26634631)	C	MamTip1	DNA/hAT-Tip100	(57)	210	88	3754820
42	0.0	0.0	0.0	chr7	132711347	132711382	(26634591)	+	(GA)n	Simple_repeat	1	36	(0)	3754821
2029	12.7	6.8	1.1	chr7	132882858	132883216	(26462757)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3755063
391	19.0	2.3	2.3	chr7	133203070	133203155	(26142818)	+	MER103C	DNA/hAT-Charlie	159	244	(53)	3755579
30	22.0	0.0	0.0	chr7	133203255	133203286	(26142687)	+	(TCTGTG)n	Simple_repeat	1	67	(0)	3755580
25	9.2	0.0	0.0	chr7	133203287	133203321	(26142652)	+	(TG)n	Simple_repeat	1	35	(0)	3755581
282	25.3	1.3	0.0	chr7	133203369	133203443	(26142530)	C	L1ME5	LINE/L1	(6)	6188	6113	3755582
68	0.0	0.0	0.0	chr7	133243117	133243174	(26102799)	+	(TC)n	Simple_repeat	1	58	(0)	3755663
438	28.7	1.5	0.8	chr7	133932771	133932900	(25413073)	+	LTR33A_	LTR/ERVL	37	167	(364)	3756697
30	3.5	0.0	0.0	chr7	133932912	133932941	(25413032)	+	(GA)n	Simple_repeat	1	30	(0)	3756698
16	5.3	0.0	0.0	chr7	133933047	133933066	(25412907)	+	(T)n	Simple_repeat	1	20	(0)	3756699
15	5.5	0.0	0.0	chr7	134767177	134767195	(24578778)	+	(CT)n	Simple_repeat	1	19	(0)	3758006
39	2.7	0.0	0.0	chr7	134767196	134767233	(24578740)	+	(TG)n	Simple_repeat	1	38	(0)	3758007
22	0.0	0.0	0.0	chr7	135496632	135496655	(23849318)	+	(CT)n	Simple_repeat	1	24	(0)	3759053
280	27.6	7.0	0.7	chr7	135558617	135558762	(23787211)	+	MER20B	DNA/hAT-Charlie	1	156	(627)	3759182
1927	21.9	4.3	1.5	chr7	135661509	135661981	(23683992)	+	LTR31	LTR/ERV1	115	601	(18)	3759373
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
50	2.2	0.0	0.0	chr7	135719782	135719828	(23626145)	+	(TG)n	Simple_repeat	1	47	(0)	3759466
32	20.9	3.5	2.2	chr7	135719863	135719949	(23626024)	+	GA-rich	Low_complexity	1	90	(0)	3759467
30	3.5	0.0	0.0	chr7	135719957	135719986	(23625987)	+	(GA)n	Simple_repeat	1	30	(0)	3759468
1696	18.9	1.6	6.9	chr7	136020444	136020621	(23325352)	+	MLT1A	LTR/ERVL-MaLR	4	174	(200)	3759996
30	6.0	0.0	0.0	chr7	136020622	136020656	(23325317)	+	(CT)n	Simple_repeat	1	35	(0)	3759997
1696	18.9	1.6	6.9	chr7	136020657	136020869	(23325104)	+	MLT1A	LTR/ERVL-MaLR	175	374	(0)	3759996
1760	15.2	0.8	1.1	chr7	136031900	136032064	(23313909)	+	AluJb	SINE/Alu	118	282	(30)	3760016
289	34.0	9.2	9.9	chr7	136032065	136032085	(23313888)	C	L2c	LINE/L2	(153)	3234	3227	3760015
43	0.0	0.0	0.0	chr7	136032086	136032122	(23313851)	+	(CA)n	Simple_repeat	1	37	(0)	3760018
289	34.0	9.2	9.9	chr7	136032123	136032335	(23313638)	C	L2c	LINE/L2	(161)	3226	2995	3760015
24	10.0	0.0	4.3	chr7	136064359	136064408	(23281565)	+	(TCTGTC)n	Simple_repeat	1	47	(0)	3760075
36	4.8	0.0	0.0	chr7	137846118	137846161	(21499812)	+	(CT)n	Simple_repeat	1	44	(0)	3762476
49	0.0	0.0	0.0	chr7	137846162	137846203	(21499770)	+	(CA)n	Simple_repeat	1	42	(0)	3762477
29	10.3	0.0	0.0	chr7	137878929	137878970	(21467003)	+	(GA)n	Simple_repeat	1	42	(0)	3762524
1550	18.8	3.5	14.2	chr7	137966880	137967300	(21378673)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3762663
2297	17.3	3.5	2.6	chr7	138029192	138029613	(21316360)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3762764
2074	11.8	0.0	5.1	chr7	138257090	138257402	(21088571)	+	AluY	SINE/Alu	1	297	(14)	3763229
1386	25.3	4.7	4.2	chr7	138257403	138257858	(21088115)	C	MER61E	LTR/ERV1	(208)	571	85	3763227
1962	14.1	10.6	1.4	chr7	138259798	138260156	(21085817)	+	LTR8A	LTR/ERV1	1	396	(331)	3763234
565	27.5	16.7	1.6	chr7	138352588	138352874	(20993099)	+	MLT1G	LTR/ERVL-MaLR	1	287	(304)	3763419
247	25.0	2.9	3.9	chr7	138352906	138353009	(20992964)	+	MLT1G	LTR/ERVL-MaLR	366	468	(101)	3763419
2001	18.6	4.1	1.2	chr7	138353043	138353483	(20992490)	C	MER67B	LTR/ERV1	(216)	445	41	3763420
14	16.1	0.0	0.0	chr7	138460459	138460486	(20885487)	+	GA-rich	Low_complexity	1	28	(0)	3763675
182	21.1	8.8	1.9	chr7	138814924	138814976	(20530997)	C	L3	LINE/CR1	(4)	4095	4039	3764386
47	2.3	0.0	0.0	chr7	138814987	138815031	(20530942)	+	(AC)n	Simple_repeat	1	45	(0)	3764387
4240	12.6	3.3	4.4	chr7	139001824	139002530	(20343443)	+	MER41-int	LTR/ERV1	1	609	(5337)	3764713
46	2.3	0.0	0.0	chr7	139002532	139002575	(20343398)	+	(CT)n	Simple_repeat	1	44	(0)	3764714
13591	10.9	2.8	2.0	chr7	139002576	139005742	(20340231)	+	MER41-int	LTR/ERV1	1421	5944	(2)	3764715
4871	2.9	0.0	0.2	chr7	139091867	139092425	(20253548)	C	LTR6B	LTR/ERV1	(0)	558	1	3764901
2060	9.7	0.0	0.0	chr7	139107521	139107777	(20238196)	+	AluSx	SINE/Alu	1	257	(55)	3764941
1925	17.8	3.8	3.0	chr7	139124309	139124929	(20221044)	+	MER34C2	LTR/ERV1	5	555	(0)	3764971
640	27.2	4.2	4.2	chr7	139277075	139277253	(20068720)	+	Charlie20a	DNA/hAT-Charlie	203	385	(422)	3765251
1743	13.8	1.6	2.0	chr7	139277254	139277557	(20068416)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	2416	3765253
361	28.6	6.2	4.5	chr7	139277567	139277756	(20068217)	+	Charlie20a	DNA/hAT-Charlie	387	577	(230)	3765254
1703	15.2	5.2	0.3	chr7	139460980	139461269	(19884704)	+	AluSx1	SINE/Alu	1	305	(7)	3765659
311	29.9	8.1	2.8	chr7	139461311	139461451	(19884522)	+	MIR	SINE/MIR	28	176	(86)	3765660
1828	17.1	0.4	0.4	chr7	139729043	139729323	(19616650)	+	AluJb	SINE/Alu	2	282	(30)	3766095
70	0.0	0.0	0.0	chr7	139729325	139729384	(19616589)	+	(GA)n	Simple_repeat	1	60	(0)	3766096
94	13.6	1.3	0.0	chr7	139878109	139878263	(19467710)	+	(GA)n	Simple_repeat	1	157	(0)	3766353
2200	14.6	10.1	0.3	chr7	140261174	140261559	(19084414)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3767020
1467	20.7	2.7	9.0	chr7	140261560	140261912	(19084061)	+	MLT1A	LTR/ERVL-MaLR	50	374	(0)	3767019
58	4.9	0.0	0.0	chr7	140567288	140567350	(18778623)	+	(GA)n	Simple_repeat	1	63	(0)	3767772
312	36.5	6.8	5.7	chr7	140992959	140993293	(18352680)	+	L2	LINE/L2	2659	2998	(421)	3768583
2645	7.3	0.0	0.3	chr7	140993294	140993595	(18352378)	C	AluY	SINE/Alu	(10)	301	1	3768584
19	4.3	0.0	0.0	chr7	141071482	141071505	(18274468)	+	(GA)n	Simple_repeat	1	24	(0)	3768721
2252	14.9	0.3	3.2	chr7	141501471	141501844	(17844129)	+	MLT2D	LTR/ERVL	1	363	(51)	3769391
22	3.8	0.0	0.0	chr7	141501848	141501874	(17844099)	+	(CT)n	Simple_repeat	1	27	(0)	3769392
256	23.1	10.0	0.0	chr7	141551677	141551784	(17794189)	+	MIR3	SINE/MIR	27	146	(62)	3769473
570	34.8	11.7	3.5	chr7	141551907	141552392	(17793581)	+	L2b	LINE/L2	2407	2937	(482)	3769474
126	14.7	0.8	1.7	chr7	141731673	141731906	(17614067)	+	(CTCT)n	Simple_repeat	1	236	(0)	3769745
21	7.5	0.0	0.0	chr7	141836552	141836579	(17509394)	+	(AG)n	Simple_repeat	1	28	(0)	3769882
245	32.6	9.1	4.7	chr7	141836634	141836782	(17509191)	+	MIR3	SINE/MIR	6	156	(52)	3769883
487	36.5	5.0	3.9	chr7	142807714	142808252	(16537721)	C	L3	LINE/CR1	(356)	3743	3199	3771017
522	31.8	4.3	5.9	chr7	142841997	142842300	(16503673)	C	MLT1J1	LTR/ERVL-MaLR	(0)	444	146	3771060
21	9.4	2.7	2.6	chr7	142842355	142842391	(16503582)	+	(TC)n	Simple_repeat	1	38	(0)	3771061
378	35.1	11.3	3.5	chr7	143370222	143370360	(15975613)	+	L2b	LINE/L2	1858	2005	(1414)	3771820
3628	10.4	2.7	1.1	chr7	143370361	143370905	(15975068)	+	MER41A	LTR/ERV1	1	554	(0)	3771821
1928	11.8	8.9	3.6	chr7	148667596	148667794	(10678179)	+	THE1D	LTR/ERVL-MaLR	1	210	(171)	3779195
45	2.4	0.0	0.0	chr7	148667795	148667837	(10678136)	+	(CT)n	Simple_repeat	1	43	(0)	3779196
1928	11.8	8.9	3.6	chr7	148667838	148667997	(10677976)	+	THE1D	LTR/ERVL-MaLR	211	380	(1)	3779195
13	19.0	8.3	0.0	chr7	149027905	149027952	(10318021)	+	(CCCTCT)n	Simple_repeat	1	52	(0)	3779849
1732	16.0	2.2	1.3	chr7	149125674	149125986	(10219987)	C	7SLRNA	srpRNA	(4)	316	1	3780093
16	22.2	3.3	3.2	chr7	149126047	149126118	(10219855)	+	(CCAGGC)n	Simple_repeat	1	72	(0)	3780094
658	1.4	0.0	0.0	chr7	149635687	149635758	(9710215)	+	tRNA-Cys-TGY	tRNA	1	72	(3)	3780964
187	29.1	7.2	1.9	chr7	149690746	149690850	(9655123)	+	MER5A	DNA/hAT-Charlie	56	166	(23)	3781035
15	5.5	0.0	0.0	chr7	149846113	149846131	(9499842)	+	(TC)n	Simple_repeat	1	19	(0)	3781230
11427	25.1	2.7	3.5	chr7	150307704	150312283	(9033690)	+	HERVH-int	LTR/ERV1	1	4432	(3281)	3781853
2682	8.3	1.2	8.3	chr7	150313287	150313731	(9032242)	C	MER4B	LTR/ERV1	(197)	413	1	3781855
16	16.8	0.0	0.0	chr7	150313738	150313765	(9032208)	+	GA-rich	Low_complexity	1	28	(0)	3781856
349	33.7	7.1	8.0	chr7	150313855	150314230	(9031743)	+	LTR67B	LTR/ERVL	72	618	(2)	3781857
1001	12.7	22.9	1.8	chr7	150378556	150378784	(8967189)	+	AluJo	SINE/Alu	1	292	(20)	3781972
48	0.0	0.0	0.0	chr7	150392546	150392586	(8953387)	+	(TC)n	Simple_repeat	1	41	(0)	3781995
1591	16.2	0.4	0.4	chr7	150392587	150392833	(8953140)	C	AluJr	SINE/Alu	(65)	247	1	3781996
15	7.3	3.2	3.1	chr7	150420268	150420298	(8925675)	+	(CAAAA)n	Simple_repeat	1	32	(0)	3782038
253	36.8	14.2	1.9	chr7	150420316	150420739	(8925234)	+	L2a	LINE/L2	2930	3414	(12)	3782039
400	25.9	3.3	2.5	chr7	150778719	150778837	(8567136)	+	Tigger9a	DNA/TcMar-Tigger	6	125	(607)	3782454
33	3.1	0.0	0.0	chr7	150962621	150962653	(8383320)	+	(GA)n	Simple_repeat	1	33	(0)	3782711
19	17.5	0.0	0.0	chr7	150965016	150965054	(8380919)	+	GA-rich	Low_complexity	1	39	(0)	3782714
21	10.8	0.0	0.0	chr7	150965054	150965084	(8380889)	+	(GT)n	Simple_repeat	1	31	(0)	3782715
95	2.3	0.0	0.0	chr7	150978892	150978981	(8366992)	+	(AC)n	Simple_repeat	1	90	(0)	3782735
475	27.5	8.0	0.7	chr7	150994167	150994305	(8351668)	+	MIRb	SINE/MIR	26	175	(93)	3782759
6554	9.3	4.1	2.9	chr7	151027014	151027969	(8318004)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3782808
18	27.5	7.3	0.0	chr7	151061675	151061774	(8284199)	+	(CTCCTCT)n	Simple_repeat	1	107	(0)	3782840
17	17.9	2.6	0.0	chr7	151248580	151248636	(8097337)	+	(CTCT)n	Simple_repeat	1	58	(0)	3783101
31	0.0	0.0	5.3	chr7	151248739	151248776	(8097197)	+	(CGC)n	Simple_repeat	1	38	(0)	3783102
21	7.6	0.0	0.0	chr7	151252414	151252441	(8093532)	+	(TG)n	Simple_repeat	1	28	(0)	3783108
42	15.3	1.4	0.0	chr7	151252441	151252513	(8093460)	+	GA-rich	Low_complexity	1	74	(0)	3783109
18	29.5	0.0	5.5	chr7	151519551	151519641	(7826332)	+	(GCGGCG)n	Simple_repeat	1	91	(0)	3783577
13	9.3	0.0	0.0	chr7	151519644	151519666	(7826307)	+	(CTCG)n	Simple_repeat	1	23	(0)	3783578
1234	23.3	5.9	6.5	chr7	151968705	151969392	(7376581)	C	L1M3	LINE/L1	(595)	5584	4932	3784340
2426	20.3	3.9	7.0	chr7	151969393	151969798	(7376175)	C	LTR71B	LTR/ERV1	(0)	610	199	3784341
13	24.6	2.3	0.0	chr7	152436347	152436389	(6909584)	+	(GCTC)n	Simple_repeat	1	44	(0)	3785121
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
2365	7.5	1.0	0.0	chr7	152707260	152707551	(6638422)	+	AluSq2	SINE/Alu	5	299	(14)	3785809
504	21.8	0.0	0.0	chr7	152888182	152888291	(6457682)	+	L1PB4	LINE/L1	6043	6152	(4)	3786143
57	1.4	8.1	0.0	chr7	153321004	153321077	(6024896)	+	(CT)n	Simple_repeat	1	80	(0)	3786788
4715	12.8	2.8	0.4	chr7	153390614	153390873	(5955100)	+	MER50	LTR/ERV1	447	721	(13)	3786870
7709	13.9	6.4	1.5	chr7	153390874	153392631	(5953342)	+	MER50-int	LTR/ERV1	7	1850	(5355)	3786870
12	28.9	0.0	0.0	chr7	153398497	153398538	(5947435)	+	(AATTAC)n	Simple_repeat	1	42	(0)	3786874
395	28.3	7.3	4.6	chr7	153398623	153398863	(5947110)	C	L1ME4a	LINE/L1	(298)	5826	5579	3786875
1711	12.8	0.4	1.2	chr7	153405880	153406129	(5939844)	C	AluSx1	SINE/Alu	(21)	291	44	3786884
378	32.7	4.9	9.8	chr7	153406130	153406364	(5939609)	+	L2b	LINE/L2	3073	3283	(92)	3786883
611	23.5	36.6	3.0	chr7	155037644	155037860	(4308113)	C	HAL1	LINE/L1	(428)	2079	1803	3789081
65	3.2	0.0	0.0	chr7	155037882	155037945	(4308028)	+	(TC)n	Simple_repeat	1	64	(0)	3789083
1580	17.6	0.0	1.5	chr7	155037946	155038206	(4307767)	C	AluJr	SINE/Alu	(55)	257	1	3789084
406	29.2	12.5	1.6	chr7	155322986	155323259	(4022714)	C	L1M5	LINE/L1	(326)	5798	5511	3789508
1718	13.9	10.6	4.5	chr7	155323260	155323614	(4022359)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	3789509
401	26.3	3.3	0.0	chr7	155324002	155324119	(4021854)	+	MER94	DNA/hAT-Blackjack	2	123	(11)	3789511
23	0.0	0.0	0.0	chr7	155472684	155472708	(3873265)	+	(TG)n	Simple_repeat	1	25	(0)	3789674
46	0.0	0.0	0.0	chr7	155472709	155472747	(3873226)	+	(GA)n	Simple_repeat	1	39	(0)	3789675
1701	16.4	3.6	0.4	chr7	155735423	155735691	(3610282)	+	AluJo	SINE/Alu	1	278	(34)	3790049
57	3.5	0.0	0.0	chr7	155735692	155735749	(3610224)	+	(TC)n	Simple_repeat	1	58	(0)	3790050
257	16.1	8.8	1.6	chr7	155964089	155964151	(3381822)	C	MIR	SINE/MIR	(176)	86	19	3790319
807	23.3	9.1	6.5	chr7	156116705	156116888	(3229085)	+	MLT1D	LTR/ERVL-MaLR	42	231	(274)	3790520
30	3.5	0.0	0.0	chr7	156116889	156116918	(3229055)	+	(AG)n	Simple_repeat	1	30	(0)	3790521
807	23.3	9.1	6.5	chr7	156116919	156117055	(3228918)	+	MLT1D	LTR/ERVL-MaLR	232	372	(133)	3790520
366	29.1	8.8	4.7	chr7	156117056	156117521	(3228452)	+	L1ME4a	LINE/L1	5621	6107	(17)	3790513
102	11.4	4.0	0.5	chr7	156539622	156539798	(2806175)	+	(CT)n	Simple_repeat	1	184	(0)	3791023
965	18.4	0.6	2.4	chr7	156556067	156556234	(2789739)	+	AluJo	SINE/Alu	137	301	(11)	3791041
44	10.3	1.3	2.5	chr7	156556235	156556308	(2789665)	+	(GA)n	Simple_repeat	2	74	(0)	3791042
2197	10.9	0.3	0.0	chr7	156581787	156582079	(2763894)	C	AluSp	SINE/Alu	(18)	295	2	3791080
100	2.0	1.0	1.0	chr7	156582102	156582203	(2763770)	+	(AG)n	Simple_repeat	1	103	(0)	3791081
16	27.8	1.8	0.0	chr7	156640631	156640686	(2705287)	+	G-rich	Low_complexity	1	57	(0)	3791165
527	20.8	16.3	1.8	chr7	156680215	156680369	(2665604)	+	MER112	DNA/hAT-Charlie	4	175	(86)	3791218
36	2.9	0.0	0.0	chr7	156680370	156680404	(2665569)	+	(GA)n	Simple_repeat	1	35	(0)	3791219
527	20.8	16.3	1.8	chr7	156680405	156680468	(2665505)	+	MER112	DNA/hAT-Charlie	176	261	(0)	3791218
19	4.3	0.0	0.0	chr7	157016593	157016616	(2329357)	+	(GA)n	Simple_repeat	1	24	(0)	3791712
31	0.0	0.0	0.0	chr7	157211168	157211194	(2134779)	+	(GA)n	Simple_repeat	1	27	(0)	3792061
31	18.3	0.0	0.0	chr7	157224776	157224837	(2121136)	+	(ACTC)n	Simple_repeat	1	62	(0)	3792087
138	21.4	2.9	0.6	chr7	157524770	157525113	(1820860)	+	GA-rich	Low_complexity	1	352	(0)	3792564
993	19.3	3.2	13.1	chr7	157525139	157525524	(1820449)	+	L1MA5	LINE/L1	5198	5547	(765)	3792565
18	21.3	4.8	1.5	chr7	158509072	158509133	(836840)	+	G-rich	Low_complexity	1	65	(0)	3793320
12	17.6	4.5	4.3	chr7	158705144	158705187	(640786)	+	GA-rich	Low_complexity	1	46	(0)	3793569
718	24.4	3.8	0.9	chr7	158830063	158830293	(515680)	C	MER65A	LTR/ERV1	(207)	238	1	3793758
725	29.3	21.6	2.7	chr8	732753	733512	(144405124)	C	L2	LINE/L2	(603)	2816	1836	3795117
17	8.8	0.0	0.0	chr8	733527	733550	(144405086)	+	(AC)n	Simple_repeat	1	24	(0)	3795119
55	0.0	0.0	0.0	chr8	733551	733597	(144405039)	+	(AG)n	Simple_repeat	1	47	(0)	3795120
453	33.7	7.5	0.7	chr8	733667	733962	(144404674)	+	L2c	LINE/L2	1727	2044	(1375)	3795121
29	11.7	0.0	0.0	chr8	940347	940393	(144198243)	+	(AGAG)n	Simple_repeat	1	47	(0)	3795328
763	26.2	9.4	2.2	chr8	940449	940725	(144197911)	C	MER68-int	LTR/ERVL	(562)	2428	2130	3795329
22	24.2	2.4	8.6	chr8	2730317	2730441	(142408195)	+	GA-rich	Low_complexity	1	128	(0)	3797222
37	0.0	0.0	0.0	chr8	2730545	2730578	(142408058)	+	(T)n	Simple_repeat	1	34	(0)	3797223
329	35.8	3.0	0.8	chr8	2909545	2909800	(142228836)	+	HAL1	LINE/L1	693	954	(1553)	3797450
28	0.0	3.0	0.0	chr8	2909884	2909916	(142228720)	+	(CT)n	Simple_repeat	1	34	(0)	3797453
36	0.0	0.0	0.0	chr8	2909917	2909947	(142228689)	+	(CA)n	Simple_repeat	1	31	(0)	3797454
441	29.5	9.8	0.5	chr8	2909948	2910141	(142228495)	+	HAL1	LINE/L1	1062	1275	(1232)	3797450
38	28.8	2.5	3.1	chr8	6745948	6746104	(138392532)	+	(TTCT)n	Simple_repeat	1	161	(0)	3802531
261	12.8	4.7	7.5	chr8	6746119	6746186	(138392450)	C	7SLRNA	srpRNA	(275)	45	1	3802532
17	8.8	0.0	0.0	chr8	8289468	8289491	(136849145)	+	(AG)n	Simple_repeat	1	24	(0)	3804467
24	23.1	2.3	4.4	chr8	9066112	9066218	(136072418)	+	(CCT)n	Simple_repeat	1	104	(0)	3805846
38	2.8	0.0	0.0	chr8	9676687	9676723	(135461913)	+	(TG)n	Simple_repeat	1	37	(0)	3806905
1678	13.0	4.0	0.7	chr8	11693185	11693453	(133445183)	+	AluJb	SINE/Alu	2	279	(33)	3810012
46	15.4	2.3	0.0	chr8	11693455	11693517	(133445119)	+	GA-rich	Low_complexity	1	65	(0)	3810013
49	2.2	0.0	0.0	chr8	11693518	11693563	(133445073)	+	(CA)n	Simple_repeat	1	46	(0)	3810014
46	15.4	2.3	0.0	chr8	11693564	11693587	(133445049)	+	GA-rich	Low_complexity	66	89	(0)	3810015
289	37.0	1.7	6.5	chr8	11693588	11693772	(133444864)	C	MIR3	SINE/MIR	(29)	179	4	3810016
8016	14.2	3.2	0.9	chr8	15571801	15573133	(129565503)	C	Tigger1	DNA/TcMar-Tigger	(1054)	1364	1	3815600
45	6.1	0.0	0.0	chr8	16551153	16551204	(128587432)	+	(TC)n	Simple_repeat	1	52	(0)	3816913
34	10.3	1.9	0.0	chr8	16551205	16551256	(128587380)	+	(AC)n	Simple_repeat	1	53	(0)	3816914
1237	19.4	7.6	3.9	chr8	16551271	16551610	(128587026)	C	MLT1A0	LTR/ERVL-MaLR	(4)	463	1	3816915
1188	16.7	9.8	1.4	chr8	18119112	18119408	(127019228)	+	THE1D	LTR/ERVL-MaLR	1	325	(56)	3819208
209	24.6	0.9	11.1	chr8	20951371	20951449	(124187187)	C	MIR	SINE/MIR	(159)	109	29	3823666
16	14.7	2.3	4.5	chr8	20951488	20951530	(124187106)	+	GA-rich	Low_complexity	1	44	(0)	3823667
24	26.7	0.0	0.0	chr8	20951537	20951593	(124187043)	+	(CT)n	Simple_repeat	1	57	(0)	3823668
246	28.1	22.6	0.0	chr8	21914057	21914138	(123224498)	C	MIRc	SINE/MIR	(126)	142	34	3825277
235	26.8	0.0	2.7	chr8	21914221	21914293	(123224343)	+	MamRep137	DNA/TcMar-Tigger	47	117	(393)	3825278
36	8.7	0.0	0.0	chr8	22060384	22060432	(123078204)	+	(CT)n	Simple_repeat	1	49	(0)	3825504
18	21.0	0.0	0.0	chr8	22060438	22060472	(123078164)	+	(CA)n	Simple_repeat	1	35	(0)	3825505
1789	14.3	2.3	6.3	chr8	22168889	22169203	(122969433)	+	AluJr	SINE/Alu	1	302	(10)	3825679
19	16.5	0.0	0.0	chr8	22169312	22169345	(122969291)	+	(TC)n	Simple_repeat	1	34	(0)	3825680
18	8.7	0.0	0.0	chr8	22210362	22210386	(122928250)	+	(T)n	Simple_repeat	1	25	(0)	3825762
14	15.3	5.4	0.0	chr8	22210387	22210396	(122928240)	+	(TCTTTT)n	Simple_repeat	3	39	(0)	3825763
34	5.6	0.0	0.0	chr8	22210432	22210469	(122928167)	+	(TC)n	Simple_repeat	1	38	(0)	3825764
13	19.5	0.0	0.0	chr8	22210470	22210499	(122928137)	+	(ACACAC)n	Simple_repeat	6	35	(0)	3825765
19	13.0	0.0	0.0	chr8	22810715	22810748	(122327888)	+	(AGAG)n	Simple_repeat	1	34	(0)	3826848
44	0.0	0.0	0.0	chr8	22810878	22810915	(122327721)	+	(GA)n	Simple_repeat	1	38	(0)	3826849
23	10.0	0.0	0.0	chr8	22811069	22811101	(122327535)	+	(CT)n	Simple_repeat	1	33	(0)	3826850
20	27.2	3.2	3.1	chr8	23074911	23075003	(122063633)	+	(CTCT)n	Simple_repeat	1	96	(0)	3827308
21	19.8	0.0	0.0	chr8	23074963	23075011	(122063625)	+	(CT)n	Simple_repeat	1	49	(0)	3827309
19	14.4	0.0	0.0	chr8	23218136	23218166	(121920470)	+	(GT)n	Simple_repeat	1	31	(0)	3827556
30	10.1	0.0	0.0	chr8	23218166	23218208	(121920428)	+	(GA)n	Simple_repeat	1	43	(0)	3827557
20	25.4	4.9	1.2	chr8	23457448	23457528	(121681108)	+	(GCCC)n	Simple_repeat	1	85	(0)	3827940
922	13.7	10.2	3.5	chr8	23750243	23750479	(121388157)	+	THE1D	LTR/ERVL-MaLR	1	266	(160)	3828459
1047	16.7	5.0	2.0	chr8	23750507	23750737	(121387899)	+	THE1D	LTR/ERVL-MaLR	184	419	(7)	3828459
20	7.9	0.0	0.0	chr8	24218971	24218997	(120919639)	+	(AG)n	Simple_repeat	1	27	(0)	3829141
1498	18.7	0.4	2.7	chr8	24989713	24989969	(120148667)	C	AluJr	SINE/Alu	(18)	294	44	3830299
1520	14.5	13.9	4.8	chr8	24989970	24990280	(120148356)	+	MSTB1	LTR/ERVL-MaLR	89	432	(0)	3830300
46	0.0	0.0	0.0	chr8	24995499	24995537	(120143099)	+	(AC)n	Simple_repeat	1	39	(0)	3830308
591	32.0	6.2	5.5	chr8	25090600	25091044	(120047592)	+	L1MC4a	LINE/L1	4210	4655	(1491)	3830477
53	0.0	0.0	0.0	chr8	25091045	25091089	(120047547)	+	(AC)n	Simple_repeat	1	45	(0)	3830478
591	32.8	7.7	5.6	chr8	25091090	25091631	(120047005)	+	L1MC4a	LINE/L1	4656	5233	(913)	3830477
35	0.0	5.4	0.0	chr8	26577982	26578018	(118560618)	+	(TC)n	Simple_repeat	1	39	(0)	3832986
53	3.8	0.0	0.0	chr8	26691513	26691566	(118447070)	+	(CT)n	Simple_repeat	1	54	(0)	3833183
24	3.6	0.0	0.0	chr8	26691567	26691595	(118447041)	+	(GT)n	Simple_repeat	1	29	(0)	3833184
1425	22.4	3.5	7.4	chr8	27404815	27405021	(117733615)	+	MLT1A	LTR/ERVL-MaLR	1	188	(186)	3834333
43	2.1	4.2	0.0	chr8	27405022	27405069	(117733567)	+	(CT)n	Simple_repeat	1	50	(0)	3834334
1425	22.4	3.5	7.4	chr8	27405070	27405251	(117733385)	+	MLT1A	LTR/ERVL-MaLR	189	374	(0)	3834333
41	2.6	0.0	0.0	chr8	27479249	27479288	(117659348)	+	(CA)n	Simple_repeat	1	40	(0)	3834445
244	24.1	10.2	7.2	chr8	28093472	28093623	(117045013)	C	Charlie15b	DNA/hAT-Charlie	(805)	256	100	3835540
244	24.7	16.8	2.2	chr8	28185426	28185516	(116953120)	C	L2c	LINE/L2	(14)	3373	3267	3835664
14	4.9	0.0	0.0	chr8	28905228	28905248	(116233388)	+	(TTG)n	Simple_repeat	1	21	(0)	3837048
24	9.7	0.0	0.0	chr8	28905324	28905375	(116233261)	+	(CA)n	Simple_repeat	1	52	(0)	3837049
373	18.2	2.5	1.3	chr8	29401675	29401752	(115736884)	C	L1ME4b	LINE/L1	(108)	784	706	3837839
16	21.3	0.0	0.0	chr8	29401759	29401791	(115736845)	+	(C)n	Simple_repeat	1	33	(0)	3837840
37	0.0	0.0	0.0	chr8	29401800	29401831	(115736805)	+	(AG)n	Simple_repeat	1	32	(0)	3837841
15	11.2	3.3	0.0	chr8	29401994	29402023	(115736613)	+	(CCTC)n	Simple_repeat	1	31	(0)	3837842
2253	12.0	8.0	6.2	chr8	29747935	29748353	(115390283)	C	MSTA	LTR/ERVL-MaLR	(1)	427	1	3838451
255	21.1	0.0	0.0	chr8	29993478	29993529	(115145107)	+	LTR33B	LTR/ERVL	446	497	(6)	3838826
390	27.3	23.8	3.9	chr8	29993537	29993657	(115144979)	+	L2a	LINE/L2	2421	2563	(856)	3838827
48	4.2	0.0	0.0	chr8	29993658	29993707	(115144929)	+	(CT)n	Simple_repeat	1	50	(0)	3838828
606	27.2	18.8	2.0	chr8	29993708	29994369	(115144267)	+	L2a	LINE/L2	2564	3387	(39)	3838827
2185	14.7	7.3	0.8	chr8	30076571	30076940	(115061696)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3838986
26	13.5	0.0	0.0	chr8	30421151	30421191	(114717445)	+	(GT)n	Simple_repeat	1	41	(0)	3839752
2347	8.7	1.0	0.3	chr8	30660805	30661102	(114477534)	+	AluSx1	SINE/Alu	1	300	(12)	3840132
15	0.0	0.0	0.0	chr8	30661133	30661149	(114477487)	+	(CA)n	Simple_repeat	1	17	(0)	3840133
33	0.0	0.0	0.0	chr8	30661165	30661192	(114477444)	+	(CA)n	Simple_repeat	1	28	(0)	3840133
411	24.2	3.2	4.4	chr8	30661196	30661355	(114477281)	C	MLT1L	LTR/ERVL-MaLR	(361)	249	92	3840134
920	18.6	5.6	1.4	chr8	30661371	30661593	(114477043)	C	Charlie10	DNA/hAT-Charlie	(1113)	1709	1477	3840135
2279	10.1	0.0	0.3	chr8	30671520	30671816	(114466820)	+	AluSg	SINE/Alu	1	296	(14)	3840165
1734	10.8	7.5	10.3	chr8	30671817	30672132	(114466504)	C	THE1D	LTR/ERVL-MaLR	(68)	313	1	3840164
13	11.2	3.2	3.1	chr8	31389643	31389673	(113748963)	+	(ATA)n	Simple_repeat	1	32	(0)	3841478
761	23.7	5.9	5.0	chr8	33413164	33413581	(111725055)	+	MLT1A	LTR/ERVL-MaLR	8	408	(0)	3844410
1293	16.4	0.0	18.4	chr8	33576192	33576296	(111562340)	+	AluJb	SINE/Alu	79	133	(179)	3844797
53	0.0	0.0	0.0	chr8	33576297	33576341	(111562295)	+	(CT)n	Simple_repeat	1	45	(0)	3844799
1293	16.4	0.0	18.4	chr8	33576342	33576515	(111562121)	+	AluJb	SINE/Alu	134	298	(14)	3844797
18	32.6	1.1	4.2	chr8	37179806	37179900	(107958736)	+	(CTCCCCC)n	Simple_repeat	1	96	(0)	3849946
41	8.0	0.0	0.0	chr8	37179921	37179973	(107958663)	+	(CT)n	Simple_repeat	1	53	(0)	3849947
2677	22.1	1.6	3.0	chr8	37336735	37337294	(107801342)	+	MLT1F2	LTR/ERVL-MaLR	1	552	(8)	3850159
27	29.4	2.8	1.8	chr8	37560725	37560831	(107577805)	+	(TC)n	Simple_repeat	1	110	(0)	3850518
24	11.4	8.2	0.0	chr8	37560880	37560928	(107577708)	+	(TC)n	Simple_repeat	1	53	(0)	3850518
589	27.7	3.6	1.6	chr8	37606168	37606358	(107532278)	+	L1M5	LINE/L1	5564	5758	(366)	3850619
38	11.2	0.0	0.0	chr8	37606480	37606539	(107532097)	+	(GAGA)n	Simple_repeat	1	60	(0)	3850620
243	37.6	6.2	3.2	chr8	37606540	37606726	(107531910)	C	L2c	LINE/L2	(452)	2967	2775	3850618
15	10.4	6.1	2.9	chr8	37782283	37782315	(107356321)	+	GA-rich	Low_complexity	1	35	(0)	3850958
36	18.1	6.5	3.0	chr8	37786707	37786725	(107351911)	+	GA-rich	Low_complexity	1	19	(0)	3850964
38	0.0	0.0	0.0	chr8	37786726	37786758	(107351878)	+	(GT)n	Simple_repeat	1	33	(0)	3850965
36	18.1	6.5	3.0	chr8	37786759	37786816	(107351820)	+	GA-rich	Low_complexity	20	80	(0)	3850966
2204	10.5	0.7	0.3	chr8	37786817	37787112	(107351524)	+	AluSx1	SINE/Alu	2	298	(14)	3850967
15	15.0	8.1	0.0	chr8	37809802	37809838	(107328798)	+	GA-rich	Low_complexity	1	40	(0)	3851013
850	22.3	16.0	6.0	chr8	37922745	37923078	(107215558)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3851226
157	26.1	2.7	0.7	chr8	37997386	37997826	(107140810)	+	(CT)n	Simple_repeat	1	453	(0)	3851396
887	21.8	0.5	2.5	chr8	37997827	37998024	(107140612)	+	MLT1A	LTR/ERVL-MaLR	181	374	(0)	3851395
231	28.1	4.7	7.6	chr8	38092219	38092349	(107046287)	C	MamGypLTR1c	LTR/Gypsy	(225)	578	452	3851620
3374	13.9	6.9	3.1	chr8	38092415	38093002	(107045634)	C	LTR9	LTR/ERV1	(0)	612	1	3851621
980	17.3	0.0	2.4	chr8	38771736	38771903	(106366733)	C	AluJr	SINE/Alu	(12)	300	137	3852938
622	17.8	4.7	17.3	chr8	38771904	38771981	(106366655)	C	MER5A	DNA/hAT-Charlie	(130)	59	1	3852937
12	10.1	5.7	2.7	chr8	38772013	38772025	(106366611)	+	GA-rich	Low_complexity	1	15	(0)	3852939
33	0.0	0.0	0.0	chr8	38772026	38772053	(106366583)	+	(AG)n	Simple_repeat	1	28	(0)	3852940
12	10.1	5.7	2.7	chr8	38772054	38772074	(106366562)	+	GA-rich	Low_complexity	16	35	(0)	3852941
797	29.0	5.0	5.5	chr8	38772169	38772533	(106366103)	+	L1M5	LINE/L1	5450	5812	(312)	3852942
23	3.7	0.0	0.0	chr8	38806449	38806476	(106332160)	+	(TG)n	Simple_repeat	1	28	(0)	3853005
28	5.9	0.0	0.0	chr8	38806476	38806511	(106332125)	+	(GA)n	Simple_repeat	1	36	(0)	3853006
1593	24.0	7.3	1.9	chr8	38806766	38807190	(106331446)	C	MER21C	LTR/ERVL	(85)	853	404	3853007
443	24.5	0.0	0.0	chr8	38883534	38883631	(106255005)	+	AluJo	SINE/Alu	2	99	(213)	3853129
51	0.0	0.0	0.0	chr8	38883713	38883756	(106254880)	+	(CA)n	Simple_repeat	1	44	(0)	3853130
45	5.3	1.7	0.0	chr8	38883769	38883827	(106254809)	+	(GA)n	Simple_repeat	1	60	(0)	3853131
3929	16.5	6.6	3.9	chr8	39414565	39415080	(105723556)	+	L1MB1	LINE/L1	5263	5783	(385)	3853852
79	5.4	2.1	0.0	chr8	39415081	39415177	(105723459)	+	(TC)n	Simple_repeat	1	99	(0)	3853853
3929	16.5	6.6	3.9	chr8	39415178	39415534	(105723102)	+	L1MB1	LINE/L1	5784	6161	(7)	3853852
1785	13.5	8.4	1.7	chr8	39568177	39568346	(105570290)	C	THE1D	LTR/ERVL-MaLR	(0)	381	212	3854034
49	0.0	2.2	0.0	chr8	39568347	39568391	(105570245)	+	(GA)n	Simple_repeat	1	46	(0)	3854035
1785	13.5	8.4	1.7	chr8	39568392	39568575	(105570061)	C	THE1D	LTR/ERVL-MaLR	(170)	211	1	3854034
1844	28.2	4.6	2.6	chr8	40707941	40708566	(104430070)	+	HAL1M8	LINE/L1	2	641	(2350)	3855782
47	2.3	0.0	0.0	chr8	40708567	40708611	(104430025)	+	(CT)n	Simple_repeat	1	45	(0)	3855783
1844	28.2	4.6	2.6	chr8	40708612	40708646	(104429990)	+	HAL1M8	LINE/L1	642	676	(2315)	3855782
2017	12.5	0.3	1.4	chr8	40708647	40708935	(104429701)	C	AluSx	SINE/Alu	(13)	299	14	3855784
68	9.9	0.0	1.8	chr8	40760681	40760792	(104377844)	+	(TC)n	Simple_repeat	1	112	(0)	3855876
29	21.6	0.0	2.9	chr8	41098956	41099024	(104039612)	+	GA-rich	Low_complexity	1	69	(0)	3856414
32	0.0	0.0	0.0	chr8	41099029	41099039	(104039597)	+	(TG)n	Simple_repeat	1	11	(0)	3856415
38	2.8	0.0	0.0	chr8	41099040	41099076	(104039560)	+	(GA)n	Simple_repeat	1	37	(0)	3856416
32	0.0	0.0	0.0	chr8	41099077	41099102	(104039534)	+	(TG)n	Simple_repeat	2	27	(0)	3856417
182	13.9	2.7	0.0	chr8	41099174	41099209	(104039427)	C	MIR3	SINE/MIR	(50)	158	122	3856418
1807	13.5	8.7	6.5	chr8	41425167	41425325	(103713311)	+	THE1D	LTR/ERVL-MaLR	1	187	(194)	3856968
41	4.8	0.0	0.0	chr8	41425326	41425369	(103713267)	+	(TC)n	Simple_repeat	1	44	(0)	3856969
1807	13.5	8.7	6.5	chr8	41425370	41425538	(103713098)	+	THE1D	LTR/ERVL-MaLR	188	343	(38)	3856968
341	14.7	4.2	1.4	chr8	41804987	41805055	(103333581)	C	Charlie1b	DNA/hAT-Charlie	(8)	515	445	3857619
37	0.0	0.0	2.8	chr8	41805065	41805100	(103333536)	+	(TG)n	Simple_repeat	1	36	(0)	3857620
91	17.8	0.0	1.1	chr8	41805101	41805266	(103333370)	+	(CT)n	Simple_repeat	2	165	(0)	3857621
1498	19.9	0.4	1.9	chr8	41805270	41805535	(103333101)	C	AluJo	SINE/Alu	(39)	273	12	3857622
3608	12.4	4.2	0.9	chr8	41818754	41819299	(103319337)	+	MER61E	LTR/ERV1	1	565	(4)	3857650
4245	6.1	1.8	3.4	chr8	42266541	42266989	(102871647)	+	MER41A	LTR/ERV1	1	441	(113)	3858477
2198	11.9	0.0	0.0	chr8	47178981	47179273	(97959363)	+	AluSx4	SINE/Alu	1	293	(17)	3861559
507	22.6	4.1	8.8	chr8	47179274	47179337	(97959299)	+	L1M3	LINE/L1	5006	5058	(1082)	3861558
78	5.1	6.5	0.8	chr8	47179379	47179502	(97959134)	+	(GA)n	Simple_repeat	1	132	(0)	3861560
350	20.5	0.5	2.4	chr8	47179510	47179613	(97959023)	+	L1M3	LINE/L1	5079	5178	(968)	3861558
305	26.2	0.0	3.6	chr8	47226107	47226189	(97912447)	C	L2b	LINE/L2	(3)	3372	3293	3861618
39	2.7	0.0	0.0	chr8	47226194	47226231	(97912405)	+	(TC)n	Simple_repeat	1	38	(0)	3861619
2387	15.7	2.8	6.3	chr8	47226252	47226526	(97912110)	C	L1MB3	LINE/L1	(243)	5940	5669	3861620
21	4.0	0.0	0.0	chr8	47493017	47493042	(97645594)	+	(GA)n	Simple_repeat	1	26	(0)	3861996
42	0.0	0.0	0.0	chr8	47493043	47493078	(97645558)	+	(GT)n	Simple_repeat	1	36	(0)	3861997
187	30.4	6.7	0.0	chr8	47493139	47493194	(97645442)	+	L2c	LINE/L2	3255	3314	(73)	3861998
79	3.9	0.0	0.0	chr8	47647617	47647697	(97490939)	+	(AG)n	Simple_repeat	1	81	(0)	3862200
1034	31.0	14.7	3.3	chr8	47647698	47648373	(97490263)	C	L2a	LINE/L2	(174)	3252	2438	3862198
20	17.7	4.3	4.2	chr8	47659595	47659663	(97478973)	+	(GCCCCC)n	Simple_repeat	1	72	(0)	3862216
861	14.3	0.8	0.8	chr8	47677923	47678055	(97460581)	+	FLAM_C	SINE/Alu	1	133	(10)	3862242
25160	17.0	3.0	3.1	chr8	47995254	47998768	(97139868)	C	HERVFH21-int	LTR/ERV1	(3122)	3407	1	3862734
3405	8.4	1.4	1.7	chr8	47998769	47999250	(97139386)	C	LTR21A	LTR/ERV1	(0)	481	1	3862734
3654	11.8	2.5	3.0	chr8	49110428	49110995	(96027641)	+	MER61E	LTR/ERV1	1	565	(4)	3864039
257	35.4	4.6	1.9	chr8	49129553	49129762	(96008874)	+	MamRep605	LTR?	564	779	(70)	3864069
29	12.6	0.0	0.0	chr8	49129791	49129834	(96008802)	+	(TG)n	Simple_repeat	1	44	(0)	3864070
21	3.1	9.1	0.0	chr8	49129834	49129866	(96008770)	+	(GA)n	Simple_repeat	1	36	(0)	3864071
1990	14.6	11.9	0.8	chr8	52884661	52884849	(92253787)	C	MSTA	LTR/ERVL-MaLR	(0)	428	220	3868827
78	0.0	3.9	0.0	chr8	52884850	52884926	(92253710)	+	(GA)n	Simple_repeat	1	80	(0)	3868828
1990	14.6	11.9	0.8	chr8	52884927	52885116	(92253520)	C	MSTA	LTR/ERVL-MaLR	(209)	219	2	3868827
21	4.0	0.0	0.0	chr8	53063977	53064002	(92074634)	+	(CT)n	Simple_repeat	1	26	(0)	3869063
22	0.0	0.0	0.0	chr8	53064002	53064025	(92074611)	+	(TG)n	Simple_repeat	1	24	(0)	3869064
25	18.9	0.0	0.0	chr8	53064025	53064072	(92074564)	+	GA-rich	Low_complexity	1	48	(0)	3869065
301	27.4	16.3	3.1	chr8	53064133	53064354	(92074282)	+	LTR33	LTR/ERVL	7	263	(252)	3869066
31	0.0	3.3	0.0	chr8	55939458	55939487	(89199149)	+	(AG)n	Simple_repeat	1	31	(0)	3873239
2693	21.9	3.2	0.7	chr8	57223075	57223628	(87915008)	C	HUERS-P3-int	LTR/ERV1	(7619)	1300	642	3875005
50	0.0	0.0	0.0	chr8	57223629	57223671	(87914965)	+	(GA)n	Simple_repeat	1	43	(0)	3875006
2627	23.2	4.7	2.2	chr8	57223672	57224303	(87914333)	C	HUERS-P3-int	LTR/ERV1	(8278)	641	1	3875005
827	22.8	11.7	4.9	chr8	58254085	58254406	(86884230)	+	MLT2C1	LTR/ERVL	5	346	(51)	3876341
78	3.9	0.0	0.0	chr8	58254407	58254486	(86884150)	+	(TC)n	Simple_repeat	1	80	(0)	3876342
827	22.8	11.7	4.9	chr8	58254487	58254528	(86884108)	+	MLT2C1	LTR/ERVL	347	397	(0)	3876341
3350	24.5	8.1	6.0	chr8	58254529	58255617	(86883019)	+	L1MC4	LINE/L1	6900	8042	(0)	3876338
31	20.5	1.4	1.4	chr8	58506959	58507028	(86631608)	+	GA-rich	Low_complexity	1	71	(0)	3876692
431	28.2	4.3	2.1	chr8	58675165	58675456	(86463180)	+	LTR40a	LTR/ERVL	151	401	(118)	3876928
24	8.8	0.0	0.0	chr8	60353096	60353107	(84785529)	+	(AC)n	Simple_repeat	1	12	(0)	3879011
2057	13.2	4.2	1.9	chr8	60353108	60353479	(84785157)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3879012
1511	17.0	7.4	0.7	chr8	60471875	60472151	(84666485)	+	AluJr4	SINE/Alu	6	302	(10)	3879201
1208	20.1	11.0	15.7	chr8	60472152	60472373	(84666263)	+	MLT1A	LTR/ERVL-MaLR	159	374	(0)	3879200
91	14.5	2.2	2.1	chr8	60759369	60759552	(84379084)	+	(CTCTCC)n	Simple_repeat	1	188	(0)	3879703
50	9.2	2.5	0.0	chr8	60816074	60816154	(84322482)	+	(TC)n	Simple_repeat	1	83	(0)	3879764
22	18.2	2.6	6.3	chr8	60909007	60909083	(84229553)	+	(CTCC)n	Simple_repeat	1	79	(0)	3879872
654	23.4	8.6	5.3	chr8	61062942	61063167	(84075469)	C	MIRb	SINE/MIR	(16)	252	19	3880112
249	30.3	11.4	10.9	chr8	61063134	61063260	(84075376)	C	L2c	LINE/L2	(64)	3323	3182	3880113
53	2.0	0.0	0.0	chr8	61063261	61063310	(84075326)	+	(GA)n	Simple_repeat	1	50	(0)	3880114
249	30.3	11.4	10.9	chr8	61063311	61063567	(84075069)	C	L2c	LINE/L2	(206)	3181	2938	3880113
34	3.0	0.0	0.0	chr8	61719295	61719328	(83419308)	+	(GT)n	Simple_repeat	1	34	(0)	3881004
1992	17.7	3.0	4.8	chr8	61746681	61747120	(83391516)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	3881053
299	25.9	4.0	14.4	chr8	66521727	66521790	(78616846)	+	MIR	SINE/MIR	15	79	(183)	3887532
76	0.0	0.0	0.0	chr8	66521791	66521855	(78616781)	+	(GA)n	Simple_repeat	1	65	(0)	3887533
589	25.1	2.5	4.0	chr8	66521856	66522052	(78616584)	+	MIRc	SINE/MIR	80	261	(7)	3887532
903	9.9	0.8	0.0	chr8	69920411	69920531	(75218105)	+	AluSx3	SINE/Alu	186	307	(4)	3892826
1359	10.5	8.8	4.8	chr8	69920532	69920761	(75217875)	+	MSTA	LTR/ERVL-MaLR	189	428	(0)	3892827
48	4.1	0.0	0.0	chr8	70160653	70160702	(74977934)	+	(GA)n	Simple_repeat	1	50	(0)	3893380
251	26.8	6.7	4.0	chr8	70160736	70160836	(74977800)	+	AmnSINE1	SINE/5S-Deu-L2	322	425	(150)	3893381
42	0.0	0.0	0.0	chr8	71912947	71912982	(73225654)	+	(GT)n	Simple_repeat	1	36	(0)	3895815
20	0.0	4.0	0.0	chr8	71912990	71913014	(73225622)	+	(AG)n	Simple_repeat	1	26	(0)	3895816
33	13.9	0.0	1.8	chr8	72052938	72052994	(73085642)	+	(GT)n	Simple_repeat	1	57	(0)	3896008
48	4.1	0.0	0.0	chr8	72052995	72053044	(73085592)	+	(GA)n	Simple_repeat	1	50	(0)	3896009
438	30.9	4.9	9.7	chr8	72053179	72053519	(73085117)	C	Charlie18a	DNA/hAT-Charlie	(0)	342	19	3896010
67	1.6	1.5	0.0	chr8	72155613	72155677	(72982959)	+	(CA)n	Simple_repeat	1	66	(0)	3896111
26	2.9	2.8	0.0	chr8	72155678	72155710	(72982926)	+	(AG)n	Simple_repeat	1	34	(0)	3896112
1738	12.2	12.3	1.5	chr8	72155845	72156169	(72982467)	C	MSTA	LTR/ERVL-MaLR	(0)	428	64	3896113
42	0.0	0.0	0.0	chr8	72882521	72882556	(72256080)	+	(GA)n	Simple_repeat	1	36	(0)	3897030
17	17.8	0.0	0.0	chr8	72882709	72882746	(72255890)	+	A-rich	Low_complexity	1	38	(0)	3897031
24	14.4	4.3	0.0	chr8	76681172	76681218	(68457418)	+	(CT)n	Simple_repeat	1	49	(0)	3902546
1360	25.7	5.0	2.1	chr8	79669813	79670201	(65468435)	C	MLT1I	LTR/ERVL-MaLR	(9)	402	2	3906306
1262	33.6	3.4	2.4	chr8	79670202	79670338	(65468298)	C	MLT1I-int	LTR/ERVL-MaLR	(6)	1381	1238	3906306
32	3.2	0.0	0.0	chr8	79670339	79670370	(65468266)	+	(TC)n	Simple_repeat	1	32	(0)	3906307
33	0.0	0.0	0.0	chr8	79670374	79670401	(65468235)	+	(CA)n	Simple_repeat	1	28	(0)	3906308
1262	33.6	3.4	2.4	chr8	79670402	79670850	(65467786)	C	MLT1I-int	LTR/ERVL-MaLR	(157)	1230	787	3906306
422	33.3	5.5	9.8	chr8	79684242	79684507	(65454129)	C	L2a	LINE/L2	(3)	3423	3131	3906330
267	11.1	0.0	0.0	chr8	79684508	79684543	(65454093)	+	L2a	LINE/L2	3376	3411	(15)	3906331
22	15.2	0.0	2.5	chr8	79684677	79684716	(65453920)	+	GA-rich	Low_complexity	1	40	(0)	3906332
2068	13.4	0.3	0.3	chr8	79790686	79790976	(65347660)	+	AluSq2	SINE/Alu	1	291	(22)	3906521
36	0.0	0.0	0.0	chr8	79790977	79791007	(65347629)	+	(AG)n	Simple_repeat	1	31	(0)	3906522
2693	18.1	7.6	1.6	chr8	79991741	79991909	(65146727)	+	MLT1F1	LTR/ERVL-MaLR	12	187	(382)	3906839
60	0.0	0.0	0.0	chr8	79991910	79991960	(65146676)	+	(CT)n	Simple_repeat	1	51	(0)	3906840
2693	18.1	7.6	1.6	chr8	79991961	79992307	(65146329)	+	MLT1F1	LTR/ERVL-MaLR	188	561	(8)	3906839
370	30.9	8.1	3.5	chr8	80000016	80000156	(65138480)	+	L2a	LINE/L2	3266	3413	(13)	3906852
17	0.0	0.0	0.0	chr8	81029346	81029364	(64109272)	+	(TC)n	Simple_repeat	1	19	(0)	3908731
29	0.0	0.0	0.0	chr8	81029365	81029389	(64109247)	+	(CA)n	Simple_repeat	1	25	(0)	3908732
162	10.5	0.0	0.0	chr8	81842344	81842580	(63296056)	+	(GAGA)n	Simple_repeat	1	237	(0)	3909852
50	0.0	0.0	0.0	chr8	81870835	81870877	(63267759)	+	(TC)n	Simple_repeat	1	43	(0)	3909890
30	0.0	0.0	0.0	chr8	81870878	81870910	(63267726)	+	(GT)n	Simple_repeat	1	33	(0)	3909891
2857	18.2	3.3	3.4	chr8	85854135	85854474	(59284162)	C	MLT2B3	LTR/ERVL	(0)	554	232	3915105
33	0.0	0.0	0.0	chr8	85854475	85854502	(59284134)	+	(GA)n	Simple_repeat	1	28	(0)	3915106
2857	18.2	3.3	3.4	chr8	85854503	85854714	(59283922)	C	MLT2B3	LTR/ERVL	(323)	231	4	3915105
24590	7.0	0.9	0.2	chr8	90045266	90051184	(55087452)	+	L1PA5	LINE/L1	207	6152	(2)	3920672
561	15.4	5.2	2.3	chr8	90051185	90051316	(55087320)	C	THE1C	LTR/ERVL-MaLR	(56)	325	185	3920671
373	10.2	4.8	0.0	chr8	90051343	90051401	(55087235)	C	THE1C	LTR/ERVL-MaLR	(319)	62	1	3920671
10671	12.9	2.0	0.4	chr8	90868279	90869884	(54268752)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	3921726
2060	14.1	10.8	1.8	chr8	90869885	90870273	(54268363)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3921726
1034	16.1	0.0	0.0	chr8	90906913	90907055	(54231581)	C	AluJb	SINE/Alu	(39)	273	131	3921779
26	0.0	0.0	0.0	chr8	90907123	90907151	(54231485)	+	(TG)n	Simple_repeat	1	29	(0)	3921780
44	0.0	0.0	0.0	chr8	90907152	90907189	(54231447)	+	(GA)n	Simple_repeat	1	38	(0)	3921781
26	0.0	0.0	0.0	chr8	91185324	91185348	(53953288)	+	(TGTC)n	Simple_repeat	1	25	(0)	3922203
17	0.0	0.0	0.0	chr8	91185364	91185382	(53953254)	+	(TG)n	Simple_repeat	1	19	(0)	3922204
17	18.6	0.0	8.0	chr8	92051538	92051587	(53087049)	+	(TC)n	Simple_repeat	1	50	(0)	3923354
21	17.8	0.0	0.0	chr8	92051565	92051602	(53087034)	+	(CA)n	Simple_repeat	1	38	(0)	3923355
43	2.5	0.0	0.0	chr8	92051603	92051643	(53086993)	+	(CT)n	Simple_repeat	1	41	(0)	3923356
1348	19.3	16.6	2.2	chr8	93003139	93003309	(52135327)	C	MSTA	LTR/ERVL-MaLR	(0)	428	227	3924579
36	0.0	0.0	0.0	chr8	93003310	93003340	(52135296)	+	(GA)n	Simple_repeat	1	31	(0)	3924580
1348	19.3	16.6	2.2	chr8	93003341	93003533	(52135103)	C	MSTA	LTR/ERVL-MaLR	(202)	226	1	3924579
15	5.5	0.0	0.0	chr8	93230258	93230276	(51908360)	+	(AG)n	Simple_repeat	1	19	(0)	3924891
18	14.7	0.0	0.0	chr8	93230410	93230439	(51908197)	+	(A)n	Simple_repeat	1	30	(0)	3924892
24	0.0	0.0	0.0	chr8	93508642	93508668	(51629968)	+	(TC)n	Simple_repeat	1	27	(0)	3925313
51	0.0	0.0	0.0	chr8	93508669	93508712	(51629924)	+	(CA)n	Simple_repeat	1	44	(0)	3925314
19	0.0	0.0	0.0	chr8	93829362	93829382	(51309254)	+	(CT)n	Simple_repeat	1	21	(0)	3925884
34	0.0	0.0	0.0	chr8	93829383	93829411	(51309225)	+	(TG)n	Simple_repeat	1	29	(0)	3925885
1907	21.9	1.5	2.7	chr8	94225814	94226226	(50912410)	C	MLT2D	LTR/ERVL	(6)	408	1	3926490
36	15.7	0.0	1.5	chr8	94226228	94226293	(50912343)	+	(TC)n	Simple_repeat	1	66	(0)	3926491
36	0.0	0.0	0.0	chr8	94226294	94226324	(50912312)	+	(CA)n	Simple_repeat	1	31	(0)	3926492
2305	9.5	0.3	0.0	chr8	94226357	94226650	(50911986)	+	AluSx	SINE/Alu	2	296	(16)	3926493
65	0.0	0.0	0.0	chr8	94997290	94997344	(50141292)	+	(AC)n	Simple_repeat	1	55	(0)	3927982
29	14.6	1.9	0.0	chr8	94997345	94997388	(50141248)	+	GA-rich	Low_complexity	11	54	(0)	3927983
641	24.4	12.8	2.6	chr8	95104746	95105010	(50033626)	+	MLT1M	LTR/ERVL-MaLR	106	401	(271)	3928200
24	0.0	0.0	0.0	chr8	95105041	95105066	(50033570)	+	(AC)n	Simple_repeat	1	26	(0)	3928201
60	0.0	0.0	0.0	chr8	95105067	95105117	(50033519)	+	(AG)n	Simple_repeat	1	51	(0)	3928202
267	32.8	7.8	0.0	chr8	95105145	95105263	(50033373)	+	MLT1M	LTR/ERVL-MaLR	544	672	(0)	3928200
788	0.0	0.0	0.0	chr8	95269657	95269738	(49868898)	C	tRNA-Ser-TCY	tRNA	(3)	82	1	3928507
32	3.2	0.0	0.0	chr8	95269957	95269988	(49868648)	+	(GA)n	Simple_repeat	1	32	(0)	3928508
34	9.1	0.0	0.0	chr8	96164136	96164182	(48974454)	+	(CT)n	Simple_repeat	1	47	(0)	3929834
47	0.0	0.0	0.0	chr8	96164183	96164222	(48974414)	+	(TG)n	Simple_repeat	1	40	(0)	3929835
1522	19.8	4.7	6.0	chr8	96215775	96216140	(48922496)	C	MLT1A0	LTR/ERVL-MaLR	(4)	361	1	3929926
36	0.0	0.0	0.0	chr8	96216189	96216219	(48922417)	+	(CA)n	Simple_repeat	1	31	(0)	3929927
37	0.0	0.0	0.0	chr8	96216226	96216257	(48922379)	+	(GA)n	Simple_repeat	1	32	(0)	3929928
238	34.6	9.0	0.0	chr8	96216392	96216492	(48922144)	+	L2b	LINE/L2	3257	3367	(8)	3929923
2008	13.7	4.5	2.4	chr8	96904991	96905363	(48233273)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3930993
18	11.6	0.0	0.0	chr8	96928440	96928467	(48210169)	+	(GA)n	Simple_repeat	1	28	(0)	3931024
5294	22.6	5.6	4.2	chr8	97077819	97078719	(48059917)	C	L1MC5	LINE/L1	(746)	8558	7627	3931193
56	2.0	0.0	0.0	chr8	97078764	97078815	(48059821)	+	(TC)n	Simple_repeat	1	52	(0)	3931196
1750	16.7	2.8	2.1	chr8	97078817	97079103	(48059533)	C	AluJo	SINE/Alu	(23)	289	1	3931197
60	4.8	0.0	0.0	chr8	97101914	97101978	(48036658)	+	(CT)n	Simple_repeat	1	65	(0)	3931233
209	36.5	3.0	1.0	chr8	97101980	97102076	(48036560)	C	L2c	LINE/L2	(25)	3362	3264	3931234
2712	15.0	9.9	3.0	chr8	97762008	97762531	(47376105)	+	LTR6A	LTR/ERV1	1	564	(0)	3932377
13	0.0	5.0	0.0	chr8	97762557	97762576	(47376060)	+	(TGTT)n	Simple_repeat	1	21	(0)	3932378
197	30.1	0.8	13.4	chr8	97762621	97762638	(47375998)	+	L2c	LINE/L2	3264	3281	(106)	3932379
4178	11.7	0.3	8.7	chr8	97762639	97763208	(47375428)	+	MER41B	LTR/ERV1	1	515	(119)	3932380
46	22.1	2.6	0.0	chr8	98211708	98211733	(46926903)	+	GA-rich	Low_complexity	1	26	(0)	3933332
40	0.0	0.0	0.0	chr8	98211734	98211767	(46926869)	+	(GT)n	Simple_repeat	1	34	(0)	3933333
46	22.1	2.6	0.0	chr8	98211768	98211853	(46926783)	+	GA-rich	Low_complexity	27	115	(0)	3933334
1984	14.5	3.4	10.3	chr8	98313329	98313765	(46824871)	+	MLT2D	LTR/ERVL	1	406	(8)	3933503
1705	16.0	0.7	0.0	chr8	98796948	98797222	(46341414)	C	Tigger1	DNA/TcMar-Tigger	(1259)	1159	883	3934172
405	21.4	5.1	0.0	chr8	98797374	98797485	(46341151)	+	L1ME4a	LINE/L1	4505	4622	(1524)	3934173
18	0.0	0.0	0.0	chr8	98891608	98891627	(46247009)	+	(TG)n	Simple_repeat	1	20	(0)	3934382
22	0.0	0.0	0.0	chr8	98891627	98891650	(46246986)	+	(GA)n	Simple_repeat	1	24	(0)	3934383
323	32.9	0.7	5.9	chr8	98891991	98892142	(46246494)	+	MamTip2	DNA/hAT-Tip100	1	144	(161)	3934384
15	9.7	0.0	0.0	chr8	100150590	100150611	(44988025)	+	(AG)n	Simple_repeat	1	22	(0)	3936243
26	18.4	0.0	0.0	chr8	100832515	100832563	(44306073)	+	(CT)n	Simple_repeat	1	49	(0)	3937603
489	18.8	10.5	0.1	chr8	100832644	100832787	(44305849)	C	LTR41C	LTR/ERVL	(0)	758	559	3937604
558	4.3	0.0	0.0	chr8	100983830	100983899	(44154737)	C	L1PA5	LINE/L1	(2)	6152	6083	3937911
24	12.3	6.5	0.0	chr8	100983979	100984024	(44154612)	+	(CT)n	Simple_repeat	1	49	(0)	3937912
2158	10.7	0.3	1.4	chr8	100984025	100984315	(44154321)	C	AluJb	SINE/Alu	(19)	293	6	3937913
34	0.0	0.0	0.0	chr8	101070381	101070409	(44068227)	+	(GT)n	Simple_repeat	1	29	(0)	3938090
24	6.8	0.0	0.0	chr8	101070410	101070440	(44068196)	+	(AG)n	Simple_repeat	1	31	(0)	3938091
35	0.0	0.0	0.0	chr8	101097838	101097867	(44040769)	+	(GA)n	Simple_repeat	1	30	(0)	3938140
2715	13.4	3.7	6.0	chr8	101161364	101161682	(43976954)	+	MER21B	LTR/ERVL	1	325	(543)	3938271
37	4.4	2.0	2.0	chr8	101161683	101161731	(43976905)	+	(TC)n	Simple_repeat	1	50	(0)	3938272
2194	9.6	0.0	1.8	chr8	101161736	101161879	(43976757)	C	AluSx1	SINE/Alu	(35)	277	136	3938273
21	22.7	0.0	0.0	chr8	101301693	101301738	(43836898)	+	(TG)n	Simple_repeat	1	46	(0)	3938508
17	18.9	2.8	0.0	chr8	101791112	101791147	(43347489)	+	(TG)n	Simple_repeat	1	37	(0)	3939334
43	19.4	0.0	0.0	chr8	101956567	101956654	(43181982)	+	GA-rich	Low_complexity	1	88	(0)	3939566
404	28.2	11.3	8.3	chr8	102522573	102522782	(42615854)	C	LTR85a	LTR/Gypsy?	(68)	634	397	3940548
62	0.0	0.0	0.0	chr8	102522783	102522835	(42615801)	+	(TG)n	Simple_repeat	1	53	(0)	3940549
404	28.2	11.3	8.3	chr8	102522836	102523000	(42615636)	C	LTR85a	LTR/Gypsy?	(306)	396	235	3940548
3764	15.1	4.3	4.3	chr8	102523001	102523727	(42614909)	+	LTR8A	LTR/ERV1	1	727	(0)	3940550
26	0.0	0.0	0.0	chr8	102813616	102813644	(42324992)	+	(TC)n	Simple_repeat	1	29	(0)	3941165
39	2.7	0.0	0.0	chr8	102813645	102813682	(42324954)	+	(CA)n	Simple_repeat	1	38	(0)	3941166
2535	13.4	1.9	5.4	chr8	104319670	104320110	(40818526)	C	MSTB	LTR/ERVL-MaLR	(1)	425	1	3943512
19	14.7	0.0	6.4	chr8	104588904	104588957	(40549679)	+	GA-rich	Low_complexity	1	50	(0)	3943935
33	2.9	0.0	0.0	chr8	104588965	104588999	(40549637)	+	(CGC)n	Simple_repeat	1	35	(0)	3943936
768	17.1	13.7	2.3	chr8	104643186	104643359	(40495277)	C	MLT2D	LTR/ERVL	(0)	414	218	3944015
16	0.0	0.0	0.0	chr8	104643362	104643379	(40495257)	+	(TC)n	Simple_repeat	1	18	(0)	3944016
303	16.4	0.0	0.0	chr8	104643390	104643444	(40495192)	C	MLT2D	LTR/ERVL	(359)	55	1	3944015
314	26.7	1.1	0.0	chr8	104643528	104643613	(40495023)	+	Charlie24	DNA/hAT-Charlie	2364	2450	(0)	3944017
1216	18.6	17.9	6.7	chr8	104652875	104653203	(40485433)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	3944032
40	25.2	2.0	0.0	chr8	104691858	104691958	(40446678)	+	GA-rich	Low_complexity	1	103	(0)	3944094
2022	12.9	4.2	2.7	chr8	104864630	104865003	(40273633)	C	THE1D	LTR/ERVL-MaLR	(0)	381	2	3944374
54	0.0	0.0	0.0	chr8	107148885	107148930	(37989706)	+	(TC)n	Simple_repeat	1	46	(0)	3947549
1373	15.2	0.5	0.9	chr8	108759939	108760149	(36378487)	+	AluSx3	SINE/Alu	49	258	(53)	3949847
55	3.7	0.0	0.0	chr8	108760150	108760205	(36378431)	+	(GA)n	Simple_repeat	1	56	(0)	3949848
31	3.3	0.0	0.0	chr8	115668718	115668748	(29469888)	+	(AG)n	Simple_repeat	1	31	(0)	3958966
57	0.0	0.0	0.0	chr8	116313382	116313430	(28825206)	+	(CT)n	Simple_repeat	1	49	(0)	3959864
1346	22.9	5.4	6.9	chr8	116545032	116545406	(28593230)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	6	3960190
363	12.9	1.7	0.0	chr8	116586270	116586333	(28552303)	C	MLT2C2	LTR/ERVL	(0)	567	503	3960273
56	7.1	0.0	0.0	chr8	116586336	116586409	(28552227)	+	(GA)n	Simple_repeat	1	74	(0)	3960274
2283	14.9	3.2	5.7	chr8	116586415	116586835	(28551801)	C	MLT2C2	LTR/ERVL	(54)	410	1	3960273
505	33.9	14.9	1.9	chr8	116878482	116878628	(28260008)	C	L3	LINE/CR1	(2308)	1791	1620	3960764
47	4.6	5.9	0.0	chr8	116878629	116878696	(28259940)	+	(TC)n	Simple_repeat	1	72	(0)	3960765
505	33.9	14.9	1.9	chr8	116878697	116878978	(28259658)	C	L3	LINE/CR1	(2480)	1619	1296	3960764
20	0.0	0.0	0.0	chr8	122592848	122592869	(22545767)	+	(TC)n	Simple_repeat	1	22	(0)	3970146
218	26.0	4.0	8.8	chr8	122592971	122593050	(22545586)	C	MER5A	DNA/hAT-Charlie	(28)	161	86	3970147
38	0.0	0.0	0.0	chr8	122722036	122722068	(22416568)	+	(AC)n	Simple_repeat	1	33	(0)	3970405
21	14.5	6.5	0.0	chr8	122722069	122722114	(22416522)	+	GA-rich	Low_complexity	1	49	(0)	3970406
16	17.6	0.0	2.9	chr8	122722273	122722306	(22416330)	+	(TA)n	Simple_repeat	1	34	(0)	3970407
1072	17.1	0.2	1.5	chr8	122773440	122773636	(22365000)	+	MLT1A	LTR/ERVL-MaLR	1	184	(224)	3970499
67	1.6	0.0	0.0	chr8	122773656	122773717	(22364919)	+	(TC)n	Simple_repeat	1	62	(0)	3970500
296	12.7	5.2	0.0	chr8	122773772	122773826	(22364810)	+	MLT1A	LTR/ERVL-MaLR	331	388	(2)	3970499
20	0.0	0.0	0.0	chr8	122800759	122800780	(22337856)	+	(AG)n	Simple_repeat	1	22	(0)	3970553
29	0.0	0.0	0.0	chr8	122882315	122882339	(22256297)	+	(AG)n	Simple_repeat	1	25	(0)	3970724
311	18.8	5.9	0.0	chr8	123157591	123157654	(21980982)	C	L2b	LINE/L2	(15)	3360	3293	3971277
22	22.0	0.0	0.0	chr8	123157699	123157742	(21980894)	+	(AC)n	Simple_repeat	1	44	(0)	3971278
23	0.0	0.0	0.0	chr8	123167992	123168016	(21970620)	+	(CA)n	Simple_repeat	1	25	(0)	3971306
54	0.0	0.0	0.0	chr8	123168017	123168062	(21970574)	+	(AG)n	Simple_repeat	1	46	(0)	3971307
1567	10.4	0.0	3.4	chr8	123168176	123168413	(21970223)	+	MER30	DNA/hAT-Charlie	1	230	(0)	3971308
1683	13.0	13.1	4.1	chr8	123251044	123251381	(21887255)	+	MSTA	LTR/ERVL-MaLR	56	428	(0)	3971483
49	0.0	0.0	0.0	chr8	123587684	123587725	(21550911)	+	(GA)n	Simple_repeat	1	42	(0)	3972189
732	31.4	7.2	6.0	chr8	123587859	123588255	(21550381)	C	L2c	LINE/L2	(12)	3375	2974	3972190
2132	12.2	0.7	0.0	chr8	123645157	123645450	(21493186)	+	AluSz	SINE/Alu	1	296	(16)	3972309
129	20.5	2.6	1.0	chr8	123645451	123645580	(21493056)	+	GA-rich	Low_complexity	176	308	(0)	3972310
331	37.5	11.5	0.0	chr8	123979627	123979895	(21158741)	+	L2	LINE/L2	2607	2910	(509)	3972895
339	27.1	15.9	2.4	chr8	123980218	123980429	(21158207)	+	L1ME4a	LINE/L1	5876	6121	(3)	3972896
28	8.6	0.0	0.0	chr8	124007265	124007302	(21131334)	+	(TC)n	Simple_repeat	1	38	(0)	3972929
29	21.0	1.3	3.9	chr8	124350401	124350477	(20788159)	+	(TC)n	Simple_repeat	1	78	(0)	3973540
31	0.0	0.0	0.0	chr8	124350478	124350504	(20788132)	+	(CA)n	Simple_repeat	1	27	(0)	3973541
238	24.7	11.0	2.7	chr8	124939437	124939511	(20199125)	+	MLT1J-int	LTR/ERVL-MaLR	1299	1380	(7)	3974642
537	26.5	14.2	3.0	chr8	124939520	124939787	(20198849)	+	MLT1J	LTR/ERVL-MaLR	2	304	(208)	3974642
2123	14.6	1.4	0.7	chr8	125306046	125306340	(19832296)	+	AluJo	SINE/Alu	1	297	(15)	3975299
17	19.9	4.9	0.0	chr8	125306435	125306475	(19832161)	+	(TC)n	Simple_repeat	1	43	(0)	3975300
735	26.5	16.1	0.9	chr8	125511830	125512260	(19626376)	C	L2a	LINE/L2	(0)	3426	2918	3975775
107	15.5	2.5	0.0	chr8	125512265	125512460	(19626176)	+	GA-rich	Low_complexity	1	201	(0)	3975776
400	24.6	4.2	0.6	chr8	125512511	125512645	(19625991)	+	MIR3	SINE/MIR	36	165	(97)	3975777
2355	12.2	0.0	0.0	chr8	125682879	125683190	(19455446)	C	AluSz	SINE/Alu	(0)	312	1	3976174
859	16.9	5.7	6.0	chr8	125683191	125683264	(19455372)	C	MLT1A	LTR/ERVL-MaLR	(119)	271	181	3976173
28	8.6	0.0	0.0	chr8	125683267	125683304	(19455332)	+	(GT)n	Simple_repeat	1	38	(0)	3976175
37	0.0	0.0	0.0	chr8	125683305	125683336	(19455300)	+	(GA)n	Simple_repeat	1	32	(0)	3976176
281	32.9	14.3	3.8	chr8	125683387	125684103	(19454533)	+	L2c	LINE/L2	2074	2878	(541)	3976177
1792	20.1	5.8	1.6	chr8	125688785	125688958	(19449678)	C	MSTD	LTR/ERVL-MaLR	(0)	396	224	3976186
41	4.8	0.0	0.0	chr8	125688959	125689002	(19449634)	+	(TG)n	Simple_repeat	1	44	(0)	3976187
1792	20.1	5.8	1.6	chr8	125689003	125689206	(19449430)	C	MSTD	LTR/ERVL-MaLR	(173)	223	1	3976186
318	29.8	6.5	5.4	chr8	125861596	125861969	(19276667)	+	HAL1ME	LINE/L1	764	1195	(1270)	3976503
50	0.0	0.0	0.0	chr8	125861970	125862012	(19276624)	+	(GT)n	Simple_repeat	1	43	(0)	3976504
318	29.2	7.5	4.8	chr8	125862013	125862128	(19276508)	+	HAL1ME	LINE/L1	1196	1315	(1150)	3976503
1554	32.8	4.8	1.3	chr8	125862213	125863055	(19275581)	+	Tigger4	DNA/TcMar-Tigger	518	1391	(1340)	3976505
369	39.2	0.5	4.4	chr8	125955770	125955996	(19182640)	C	L2	LINE/L2	(525)	2894	2677	3976655
14	14.2	3.2	0.0	chr8	125956278	125956308	(19182328)	+	A-rich	Low_complexity	1	32	(0)	3976656
12	20.1	6.5	4.5	chr8	127736250	127736311	(17402325)	+	(AGCG)n	Simple_repeat	1	66	(0)	3979958
418	32.0	4.4	1.9	chr8	127741885	127742040	(17396596)	C	MIRb	SINE/MIR	(53)	215	56	3979963
530	28.8	8.6	2.5	chr8	127742153	127742348	(17396288)	C	MIR	SINE/MIR	(19)	243	35	3979964
918	26.3	2.0	0.8	chr8	127910619	127910867	(17227769)	C	MIR	SINE/MIR	(0)	262	11	3980379
37	2.8	0.0	0.0	chr8	127910878	127910913	(17227723)	+	(TG)n	Simple_repeat	1	36	(0)	3980380
17	0.0	0.0	0.0	chr8	127910914	127910932	(17227704)	+	(AG)n	Simple_repeat	1	19	(0)	3980381
1663	11.8	7.9	0.4	chr8	127937256	127937501	(17201135)	C	AluSz6	SINE/Alu	(0)	312	47	3980436
26	8.6	0.0	0.0	chr8	127937539	127937548	(17201088)	+	(AG)n	Simple_repeat	1	10	(0)	3980437
38	0.0	0.0	0.0	chr8	127937549	127937581	(17201055)	+	(AC)n	Simple_repeat	1	33	(0)	3980438
26	8.6	0.0	0.0	chr8	127937582	127937609	(17201027)	+	(AG)n	Simple_repeat	1	28	(0)	3980439
249	30.5	10.3	2.5	chr8	127937778	127937948	(17200688)	C	MIRb	SINE/MIR	(75)	193	13	3980440
190	28.4	7.5	1.3	chr8	128065775	128065849	(17072787)	C	L2c	LINE/L2	(24)	3351	3272	3980718
359	30.6	16.5	7.4	chr8	128065874	128066102	(17072534)	C	L2a	LINE/L2	(4)	3422	3169	3980719
308	29.4	4.5	0.0	chr8	128121211	128121295	(17017341)	+	MIRb	SINE/MIR	88	176	(92)	3980841
24	6.7	0.0	0.0	chr8	128121397	128121428	(17017208)	+	(TG)n	Simple_repeat	1	32	(0)	3980842
43	18.6	0.0	0.0	chr8	128121428	128121507	(17017129)	+	GA-rich	Low_complexity	1	80	(0)	3980843
2090	23.7	6.4	1.3	chr8	128283114	128283719	(16854917)	+	L1ME3A	LINE/L1	5471	6109	(64)	3981171
18	0.0	0.0	0.0	chr8	128283734	128283753	(16854883)	+	(CT)n	Simple_repeat	1	20	(0)	3981172
21	0.0	0.0	0.0	chr8	128283753	128283775	(16854861)	+	(TG)n	Simple_repeat	1	23	(0)	3981173
262	28.8	3.6	4.8	chr8	128296876	128296959	(16841677)	C	MIRb	SINE/MIR	(75)	193	107	3981207
1546	33.8	4.0	3.4	chr8	128296974	128298132	(16840504)	+	L2a	LINE/L2	2255	3425	(1)	3981208
38	2.8	0.0	0.0	chr8	128313309	128313345	(16825291)	+	(TC)n	Simple_repeat	1	37	(0)	3981240
471	26.7	14.8	0.0	chr8	128313424	128313584	(16825052)	+	MIRb	SINE/MIR	4	192	(76)	3981241
564	29.6	13.9	4.1	chr8	128340863	128341204	(16797432)	+	MamGypsy2-I	LTR/Gypsy	3015	3395	(771)	3981298
17	0.0	3.6	6.9	chr8	128341273	128341284	(16797352)	+	(GA)n	Simple_repeat	1	12	(0)	3981299
36	8.7	0.0	0.0	chr8	128341285	128341333	(16797303)	+	(AC)n	Simple_repeat	1	49	(0)	3981300
17	0.0	3.6	6.9	chr8	128341334	128341348	(16797288)	+	(GA)n	Simple_repeat	1	15	(0)	3981301
300	24.4	3.6	10.6	chr8	128341349	128341499	(16797137)	C	MER103C	DNA/hAT-Charlie	(55)	242	103	3981302
16	4.5	4.3	0.0	chr8	128428388	128428410	(16710226)	+	(GA)n	Simple_repeat	1	24	(0)	3981461
270	31.4	2.2	6.7	chr8	128428490	128428666	(16709970)	+	MIRb	SINE/MIR	32	198	(64)	3981462
793	18.6	20.7	1.6	chr8	128679104	128679351	(16459285)	C	THE1D	LTR/ERVL-MaLR	(85)	296	1	3981896
183	21.9	20.7	1.4	chr8	128854148	128854221	(16284415)	C	MIR3	SINE/MIR	(102)	106	15	3982142
29	10.6	2.0	0.0	chr8	128854230	128854280	(16284356)	+	(CA)n	Simple_repeat	1	52	(0)	3982143
49	20.7	1.6	1.6	chr8	128854281	128854392	(16284244)	+	(TC)n	Simple_repeat	1	112	(0)	3982144
27	6.0	0.0	0.0	chr8	129456109	129456143	(15682493)	+	(CT)n	Simple_repeat	1	35	(0)	3983171
43	0.0	0.0	0.0	chr8	129456144	129456180	(15682456)	+	(TG)n	Simple_repeat	1	37	(0)	3983172
22	23.4	1.4	1.4	chr8	129456181	129456213	(15682423)	+	(CTCTTT)n	Simple_repeat	6	38	(0)	3983173
328	37.6	5.1	1.6	chr8	129456293	129456481	(15682155)	+	L2c	LINE/L2	3114	3309	(78)	3983174
1809	16.4	3.3	3.3	chr8	129574165	129574597	(15564039)	+	L1MA8	LINE/L1	5822	6249	(42)	3983395
314	29.0	9.5	0.8	chr8	129574598	129574722	(15563914)	+	L2	LINE/L2	2853	2989	(430)	3983396
334	36.6	7.4	4.5	chr8	129574738	129575117	(15563519)	+	L2c	LINE/L2	2941	3341	(46)	3983397
981	28.8	13.2	4.2	chr8	129582601	129583141	(15555495)	C	L2a	LINE/L2	(0)	3426	2825	3983408
356	26.3	4.1	4.1	chr8	129689058	129689180	(15449456)	C	MIRb	SINE/MIR	(114)	154	32	3983612
211	34.2	9.7	0.6	chr8	129690166	129690325	(15448311)	C	MIR1_Amn	SINE/MIR	(0)	262	73	3983613
1059	24.9	2.4	0.0	chr8	129690583	129690823	(15447813)	C	MIR	SINE/MIR	(13)	249	3	3983614
22	0.0	0.0	0.0	chr8	129937882	129937905	(15200731)	+	(TC)n	Simple_repeat	1	24	(0)	3983986
2195	12.7	0.0	0.3	chr8	130032186	130032485	(15106151)	C	AluSx1	SINE/Alu	(13)	299	1	3984235
182	29.6	3.6	0.0	chr8	130032489	130032542	(15106094)	C	MIRc	SINE/MIR	(181)	87	32	3984232
2557	14.4	2.7	2.5	chr8	130032606	130032655	(15105981)	+	MER65A	LTR/ERV1	1	48	(397)	3984236
2053	15.7	0.3	0.3	chr8	130032656	130032961	(15105675)	+	AluJo	SINE/Alu	1	306	(6)	3984237
143	15.5	0.4	0.4	chr8	130070815	130071055	(15067581)	+	GA-rich	Low_complexity	1	242	(0)	3984313
586	22.5	4.0	0.0	chr8	130071148	130071267	(15067369)	C	FLAM_C	SINE/Alu	(14)	129	5	3984314
49	0.0	0.0	0.0	chr8	130276688	130276729	(14861907)	+	(AC)n	Simple_repeat	1	42	(0)	3984697
30	0.0	2.8	0.0	chr8	130276730	130276765	(14861871)	+	(TC)n	Simple_repeat	1	37	(0)	3984698
44	0.0	0.0	0.0	chr8	130284843	130284880	(14853756)	+	(AC)n	Simple_repeat	1	38	(0)	3984710
28	5.8	0.0	0.0	chr8	130284887	130284928	(14853708)	+	(GA)n	Simple_repeat	1	42	(0)	3984711
48	0.0	0.0	0.0	chr8	130300114	130300154	(14838482)	+	(AC)n	Simple_repeat	1	41	(0)	3984738
31	7.0	0.0	0.0	chr8	130300155	130300199	(14838437)	+	(GAGA)n	Simple_repeat	1	45	(0)	3984739
2276	11.3	0.0	0.0	chr8	130462572	130462871	(14675765)	+	AluSp	SINE/Alu	1	300	(13)	3985091
1247	22.2	3.1	6.5	chr8	130462872	130462921	(14675715)	+	L1ME3	LINE/L1	5815	5869	(293)	3985089
51	2.1	0.0	0.0	chr8	130462922	130462969	(14675667)	+	(GA)n	Simple_repeat	1	48	(0)	3985092
1247	22.2	3.1	6.5	chr8	130462970	130463092	(14675544)	+	L1ME3	LINE/L1	5870	5972	(190)	3985089
2265	9.9	0.0	3.4	chr8	133633484	133633806	(11504830)	C	AluSx	SINE/Alu	(0)	312	1	3990896
44	2.4	0.0	0.0	chr8	133633874	133633915	(11504721)	+	(TG)n	Simple_repeat	1	42	(0)	3990897
33	8.5	1.9	1.9	chr8	133633916	133633967	(11504669)	+	(AG)n	Simple_repeat	1	53	(0)	3990898
47	13.9	0.0	0.0	chr8	134635601	134635679	(10502957)	+	(GAGA)n	Simple_repeat	1	79	(0)	3992606
40	23.5	1.1	0.0	chr8	140233528	140233618	(4905018)	+	(TC)n	Simple_repeat	1	92	(0)	4001586
33	0.0	0.0	0.0	chr8	140233624	140233651	(4904985)	+	(CA)n	Simple_repeat	1	28	(0)	4001587
51	13.3	1.2	0.0	chr8	140522667	140522749	(4615887)	+	(AG)n	Simple_repeat	1	84	(0)	4002134
36	0.0	0.0	0.0	chr8	141073484	141073514	(4065122)	+	(GA)n	Simple_repeat	1	31	(0)	4003131
24	0.0	0.0	0.0	chr8	141073515	141073540	(4065096)	+	(TG)n	Simple_repeat	1	26	(0)	4003132
230	24.1	1.7	1.7	chr8	143267742	143267800	(1870836)	C	MIRb	SINE/MIR	(92)	176	118	4005996
1072	8.4	0.0	0.0	chr8	144061158	144061311	(1077325)	+	MER41A	LTR/ERV1	1	154	(400)	4007036
353	31.2	16.4	2.8	chr8	144079155	144079438	(1059198)	+	L2a	LINE/L2	3097	3426	(0)	4007076
25	31.3	1.7	2.5	chr8	144478236	144478354	(660282)	+	GA-rich	Low_complexity	1	121	(0)	4007652
17	21.1	1.9	3.7	chr8	144522867	144522919	(615717)	+	(CGG)n	Simple_repeat	1	54	(0)	4007704
6230	10.0	1.6	4.2	chr8	145032726	145033850	(104786)	+	HERV9N-int	LTR/ERV1	3279	4213	(1161)	4008438
6261	2.9	0.1	0.0	chr8	145033851	145034568	(104068)	+	L1PA3	LINE/L1	5426	6144	(11)	4008439
13	23.1	3.7	3.6	chr9	2015450	2015503	(136379214)	+	(GCC)n	Simple_repeat	1	56	(0)	4011561
23	6.3	0.0	5.4	chr9	2633032	2633051	(135761666)	+	(GA)n	Simple_repeat	1	20	(0)	4012389
43	0.0	0.0	0.0	chr9	2633052	2633088	(135761629)	+	(GT)n	Simple_repeat	1	37	(0)	4012390
23	6.3	0.0	5.4	chr9	2633089	2633104	(135761613)	+	(GA)n	Simple_repeat	1	15	(0)	4012391
403	28.6	27.2	0.0	chr9	2844490	2844686	(135550031)	+	MIRb	SINE/MIR	9	262	(0)	4012734
4218	23.6	7.8	4.2	chr9	3441091	3441918	(134952799)	+	L1MC3	LINE/L1	6371	7206	(579)	4013617
6938	7.6	0.4	10.2	chr9	3475213	3476329	(134918388)	C	LTR13	LTR/ERVK	(0)	1007	1	4013667
31	12.9	3.4	0.0	chr9	3525764	3525843	(134868874)	+	GA-rich	Low_complexity	1	82	(0)	4013734
34	9.2	0.0	0.0	chr9	3525927	3526019	(134868698)	+	(AG)n	Simple_repeat	1	93	(0)	4013735
81	11.1	4.2	2.9	chr9	3532254	3532424	(134862293)	+	(TCTCCC)n	Simple_repeat	1	173	(0)	4013745
2418	12.4	2.4	2.1	chr9	4544733	4545112	(133849605)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4015226
35	0.0	0.0	0.0	chr9	4545190	4545219	(133849498)	+	(TC)n	Simple_repeat	1	30	(0)	4015227
31	11.6	0.0	0.0	chr9	4600461	4600507	(133794210)	+	(GA)n	Simple_repeat	1	47	(0)	4015318
44	0.0	0.0	0.0	chr9	7052864	7052901	(131341816)	+	(AG)n	Simple_repeat	1	38	(0)	4019176
2531	12.4	8.0	2.7	chr9	7122028	7122239	(131272478)	C	MSTA	LTR/ERVL-MaLR	(0)	428	196	4019274
31	0.0	0.0	0.0	chr9	7122240	7122266	(131272451)	+	(CA)n	Simple_repeat	1	27	(0)	4019275
2531	12.4	8.0	2.7	chr9	7122267	7122458	(131272259)	C	MSTA	LTR/ERVL-MaLR	(233)	195	1	4019274
254	29.4	3.9	9.0	chr9	7122471	7122653	(131272064)	+	MIRb	SINE/MIR	60	243	(25)	4019276
23	0.0	0.0	0.0	chr9	14182684	14182708	(124212009)	+	(CT)n	Simple_repeat	1	25	(0)	4028626
60	0.0	0.0	0.0	chr9	14182709	14182759	(124211958)	+	(TG)n	Simple_repeat	1	51	(0)	4028627
380	34.0	2.0	1.3	chr9	14182777	14182928	(124211789)	+	MIRb	SINE/MIR	63	215	(53)	4028628
24	6.9	0.0	0.0	chr9	14530402	14530432	(123864285)	+	(GA)n	Simple_repeat	1	31	(0)	4029122
818	16.6	0.0	0.0	chr9	19198929	19199073	(119195644)	C	LTR54	LTR/ERV1	(0)	510	366	4035835
1437	13.8	2.6	2.2	chr9	19199118	19199346	(119195371)	C	LTR54	LTR/ERV1	(280)	230	1	4035835
626	14.3	0.9	0.0	chr9	19199348	19199459	(119195258)	+	L1MB5	LINE/L1	5139	5251	(895)	4035821
43	4.5	0.0	0.0	chr9	19426347	19426392	(118968325)	+	(TC)n	Simple_repeat	1	46	(0)	4036304
20	5.1	9.8	0.0	chr9	19426395	19426435	(118968282)	+	(CCTTCC)n	Simple_repeat	1	45	(0)	4036305
1926	21.5	8.7	5.1	chr9	27434853	27435047	(110959670)	+	MER34C_	LTR/ERV1	1	211	(374)	4047145
46	2.3	0.0	0.0	chr9	27435048	27435091	(110959626)	+	(TC)n	Simple_repeat	1	44	(0)	4047146
1926	21.5	8.7	5.1	chr9	27435092	27435448	(110959269)	+	MER34C_	LTR/ERV1	212	574	(11)	4047145
2703	22.8	1.5	3.5	chr9	31807618	31808218	(106586499)	C	HUERS-P2-int	LTR/ERV1	(2099)	989	401	4052881
966	21.6	11.4	14.9	chr9	32610048	32610182	(105784535)	+	MLT1H1	LTR/ERVL-MaLR	23	149	(406)	4053934
715	18.4	0.9	0.0	chr9	32610183	32610296	(105784421)	+	AluJr	SINE/Alu	1	115	(197)	4053935
966	21.6	11.4	14.9	chr9	32610297	32610307	(105784410)	+	MLT1H1	LTR/ERVL-MaLR	150	156	(399)	4053934
36	5.3	0.0	0.0	chr9	32610308	32610347	(105784370)	+	(TC)n	Simple_repeat	1	40	(0)	4053936
44	2.4	0.0	0.0	chr9	32610348	32610389	(105784328)	+	(CA)n	Simple_repeat	1	42	(0)	4053937
966	21.6	11.4	14.9	chr9	32610390	32610795	(105783922)	+	MLT1H1	LTR/ERVL-MaLR	157	554	(1)	4053934
208	27.9	5.1	3.7	chr9	32991960	32992093	(105402624)	C	L2c	LINE/L2	(1022)	2397	2262	4054547
283	32.9	10.9	5.8	chr9	33160783	33160922	(105233795)	+	L1ME4a	LINE/L1	5948	6106	(18)	4054853
29	0.0	0.0	0.0	chr9	33161022	33161046	(105233671)	+	(TC)n	Simple_repeat	1	25	(0)	4054855
398	33.6	2.0	8.3	chr9	33239587	33239852	(105154865)	C	MIRc	SINE/MIR	(0)	268	20	4055033
23	21.0	2.6	3.8	chr9	33239853	33239934	(105154783)	+	(TCTCTT)n	Simple_repeat	1	81	(0)	4055034
21	21.4	0.0	0.0	chr9	33773214	33773259	(104621458)	+	GA-rich	Low_complexity	1	46	(0)	4055963
668	25.0	2.6	1.3	chr9	33773359	33773512	(104621205)	+	L1M4a1	LINE/L1	445	600	(1979)	4055964
47	0.0	0.0	0.0	chr9	33859761	33859800	(104534917)	+	(TG)n	Simple_repeat	1	40	(0)	4056147
17	0.0	0.0	0.0	chr9	33859801	33859819	(104534898)	+	(AG)n	Simple_repeat	1	19	(0)	4056148
1830	18.1	0.4	2.1	chr9	33859820	33860106	(104534611)	C	AluJr	SINE/Alu	(30)	282	1	4056149
1864	15.3	0.0	1.8	chr9	34420693	34420973	(103973744)	+	AluJb	SINE/Alu	1	276	(36)	4057405
30	2.9	0.0	0.0	chr9	34420974	34421009	(103973708)	+	(GT)n	Simple_repeat	1	36	(0)	4057406
42	0.0	0.0	0.0	chr9	34421010	34421045	(103973672)	+	(GA)n	Simple_repeat	1	36	(0)	4057407
2244	9.7	0.3	2.2	chr9	34645676	34645986	(103748731)	C	AluSc	SINE/Alu	(4)	305	1	4057736
25	16.6	2.1	0.0	chr9	34646058	34646105	(103748612)	+	GA-rich	Low_complexity	1	49	(0)	4057737
1001	29.2	17.5	10.0	chr9	35769386	35770492	(102624225)	C	L2c	LINE/L2	(0)	3426	2281	4059393
55	0.0	0.0	0.0	chr9	35770493	35770539	(102624178)	+	(GA)n	Simple_repeat	1	47	(0)	4059394
1001	30.3	9.4	12.9	chr9	35770540	35770682	(102624035)	C	L2c	LINE/L2	(1139)	2280	2124	4059393
292	28.8	7.0	14.5	chr9	35945808	35946055	(102448662)	C	LTR50	LTR/ERVL	(567)	228	1	4059675
225	26.6	9.5	4.8	chr9	38040198	38040352	(100354365)	+	MIR3	SINE/MIR	16	197	(71)	4063826
33	2.4	0.0	2.2	chr9	38071321	38071351	(100323366)	+	(TG)n	Simple_repeat	1	31	(0)	4063876
44	0.0	0.0	0.0	chr9	38071352	38071389	(100323328)	+	(GA)n	Simple_repeat	1	38	(0)	4063877
33	2.4	0.0	2.2	chr9	38071390	38071402	(100323315)	+	(TG)n	Simple_repeat	2	13	(0)	4063878
1675	20.1	6.1	0.8	chr9	38191246	38191617	(100203100)	C	MSTD	LTR/ERVL-MaLR	(2)	394	2	4064121
56	1.9	0.0	0.0	chr9	38191620	38191671	(100203046)	+	(TG)n	Simple_repeat	1	52	(0)	4064122
34	0.0	0.0	0.0	chr9	38191672	38191708	(100203009)	+	(AG)n	Simple_repeat	1	37	(0)	4064123
1515	17.3	7.5	4.4	chr9	38239223	38239593	(100155124)	+	MLT2B4	LTR/ERVL	1	400	(64)	4064222
74	5.1	0.0	0.0	chr9	38239597	38239677	(100155040)	+	(TC)n	Simple_repeat	1	81	(0)	4064223
308	33.3	9.6	2.2	chr9	38239721	38239855	(100154862)	+	L2b	LINE/L2	3226	3371	(16)	4064221
523	32.3	2.9	5.2	chr9	38375892	38376154	(100018563)	C	MIRb	SINE/MIR	(6)	256	3	4064478
31	0.0	0.0	0.0	chr9	38376241	38376267	(100018450)	+	(TC)n	Simple_repeat	1	27	(0)	4064479
735	18.9	1.6	11.6	chr9	38376272	38376486	(100018231)	+	MLT1A	LTR/ERVL-MaLR	181	373	(1)	4064480
8104	6.6	0.4	2.1	chr9	41358049	41359305	(97035412)	+	SST1	Satellite/centr	1	1235	(327)	4068508
30	24.4	1.4	0.0	chr9	41359307	41359379	(97035338)	+	(TG)n	Simple_repeat	1	74	(0)	4068509
34	3.0	0.0	0.0	chr9	41359403	41359436	(97035281)	+	(TC)n	Simple_repeat	1	34	(0)	4068510
14	17.1	11.9	0.0	chr9	68705180	68705238	(69689479)	+	(GGCAGCC)n	Simple_repeat	1	66	(0)	4080300
15	28.0	0.0	0.0	chr9	68795140	68795178	(69599539)	+	(TG)n	Simple_repeat	1	39	(0)	4080440
406	33.7	0.8	1.7	chr9	68795179	68795357	(69599360)	+	MIRb	SINE/MIR	8	192	(76)	4080441
733	25.6	1.1	1.1	chr9	69134714	69134899	(69259818)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	189	4081074
52	1.4	8.1	0.0	chr9	69134923	69134996	(69259721)	+	(GA)n	Simple_repeat	1	80	(0)	4081075
1080	14.8	0.0	0.6	chr9	69135015	69135177	(69259540)	C	MLT1A	LTR/ERVL-MaLR	(212)	162	1	4081074
1564	19.1	9.1	3.7	chr9	69895030	69895335	(68499382)	+	MLT2C1	LTR/ERVL	1	340	(57)	4082280
41	0.0	0.0	0.0	chr9	69895336	69895370	(68499347)	+	(TC)n	Simple_repeat	1	35	(0)	4082281
1564	19.1	9.1	3.7	chr9	69895371	69895438	(68499279)	+	MLT2C1	LTR/ERVL	341	397	(0)	4082280
21	4.0	0.0	0.0	chr9	70390633	70390658	(68004059)	+	(AC)n	Simple_repeat	1	26	(0)	4083056
18	0.0	7.1	3.3	chr9	70390658	70390685	(68004032)	+	(CT)n	Simple_repeat	1	30	(0)	4083057
753	33.5	7.5	5.2	chr9	71639450	71639878	(66754839)	+	L2	LINE/L2	1024	1464	(1955)	4084949
54	0.0	0.0	0.0	chr9	71639879	71639924	(66754793)	+	(TC)n	Simple_repeat	1	46	(0)	4084950
1838	17.3	0.0	2.8	chr9	71639925	71640213	(66754504)	C	AluJb	SINE/Alu	(31)	281	1	4084951
66	27.1	0.0	1.2	chr9	71756192	71756363	(66638354)	+	(TA)n	Simple_repeat	1	172	(0)	4085175
41	0.0	0.0	0.0	chr9	71756473	71756507	(66638210)	+	(CT)n	Simple_repeat	1	35	(0)	4085176
33	2.6	0.0	0.0	chr9	71756508	71756546	(66638171)	+	(AC)n	Simple_repeat	1	39	(0)	4085177
18	8.5	0.0	0.0	chr9	71756547	71756571	(66638146)	+	(AG)n	Simple_repeat	1	25	(0)	4085178
29	5.8	0.0	0.0	chr9	71768574	71768609	(66626108)	+	(CCT)n	Simple_repeat	1	36	(0)	4085192
17	0.0	0.0	0.0	chr9	71768898	71768919	(66625798)	+	(GGGC)n	Simple_repeat	1	22	(0)	4085193
841	29.1	2.8	1.2	chr9	72304389	72304632	(66090085)	C	LTR85a	LTR/Gypsy?	(12)	690	443	4086249
38	4.2	4.1	0.0	chr9	72304685	72304733	(66089984)	+	(CT)n	Simple_repeat	1	51	(0)	4086250
474	25.5	8.9	7.3	chr9	72304753	72304972	(66089745)	C	LTR85a	LTR/Gypsy?	(277)	425	202	4086249
2157	11.4	12.2	2.3	chr9	72873938	72874322	(65520395)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4087289
884	20.9	32.6	0.9	chr9	76456068	76456608	(61938109)	+	LTR50	LTR/ERVL	1	795	(0)	4092587
8224	5.6	0.2	0.2	chr9	76665838	76666844	(61727873)	+	LTR13	LTR/ERVK	1	1007	(0)	4092978
9841	3.6	2.1	13.6	chr9	83272058	83273626	(55121091)	+	SVA_C	Retroposon/SVA	1	1384	(0)	4102611
16	23.3	1.3	7.7	chr9	83622940	83623016	(54771701)	+	G-rich	Low_complexity	1	78	(0)	4103205
474	26.8	17.2	3.5	chr9	87379178	87379521	(51015196)	+	L1ME4b	LINE/L1	472	844	(48)	4109367
43	4.5	0.0	0.0	chr9	87379522	87379567	(51015150)	+	(TC)n	Simple_repeat	1	46	(0)	4109368
474	27.0	10.9	3.7	chr9	87379568	87379613	(51015104)	+	L1ME4b	LINE/L1	845	891	(1)	4109367
2369	11.7	0.0	0.0	chr9	87379668	87379957	(51014760)	+	AluSz	SINE/Alu	1	290	(22)	4109369
2645	5.5	0.0	0.0	chr9	87479351	87479657	(50915060)	C	AluY	SINE/Alu	(4)	307	1	4109567
2244	10.4	0.3	1.6	chr9	87479658	87479790	(50914927)	C	AluSz	SINE/Alu	(180)	132	2	4109566
31	3.3	0.0	0.0	chr9	87495141	87495171	(50899546)	+	(AG)n	Simple_repeat	1	31	(0)	4109597
663	25.3	3.1	4.0	chr9	87495172	87495361	(50899356)	C	MLT1F1	LTR/ERVL-MaLR	(380)	189	1	4109596
340	23.4	10.0	5.8	chr9	88577446	88577653	(49817064)	C	MLT1B	LTR/ERVL-MaLR	(17)	391	189	4111441
362	22.3	9.2	8.2	chr9	88577680	88577850	(49816867)	C	MLT1B	LTR/ERVL-MaLR	(217)	173	1	4111441
156	30.0	3.8	2.0	chr9	88872812	88873041	(49521676)	+	GA-rich	Low_complexity	1	237	(0)	4111837
59	0.0	0.0	0.0	chr9	88873078	88873127	(49521590)	+	(GA)n	Simple_repeat	1	50	(0)	4111838
156	30.0	3.8	2.0	chr9	88873244	88873580	(49521137)	+	GA-rich	Low_complexity	384	732	(0)	4111839
2088	12.6	6.0	1.9	chr9	88963328	88963692	(49431025)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4111933
2876	16.6	1.1	2.2	chr9	88963693	88963803	(49430914)	+	L1MA7	LINE/L1	5005	5111	(1032)	4111931
815	13.8	0.8	2.3	chr9	89310323	89310452	(49084265)	C	FLAM_A	SINE/Alu	(10)	132	5	4112388
996	30.7	2.1	4.7	chr9	89556660	89556724	(48837993)	C	L1M5	LINE/L1	(698)	5746	5682	4112651
33	0.0	0.0	0.0	chr9	89556725	89556752	(48837965)	+	(TG)n	Simple_repeat	1	28	(0)	4112652
996	30.7	2.1	4.7	chr9	89556753	89557171	(48837546)	C	L1M5	LINE/L1	(763)	5681	5275	4112651
49	0.0	0.0	0.0	chr9	91100132	91100173	(47294544)	+	(TC)n	Simple_repeat	1	42	(0)	4114698
1525	22.4	9.4	5.2	chr9	91173882	91174238	(47220479)	C	L1ME2	LINE/L1	(1649)	4497	4104	4114822
41	0.0	0.0	0.0	chr9	91174239	91174273	(47220444)	+	(AG)n	Simple_repeat	1	35	(0)	4114829
1525	22.4	9.4	5.2	chr9	91174274	91174419	(47220298)	C	L1ME2	LINE/L1	(2043)	4103	3962	4114822
2871	24.1	5.8	7.8	chr9	91174420	91175619	(47219098)	+	L1M5	LINE/L1	2509	3682	(2464)	4114830
2206	11.6	0.3	0.0	chr9	91404309	91404601	(46990116)	C	AluSx	SINE/Alu	(17)	295	2	4115165
306	31.1	21.0	0.5	chr9	92180845	92181041	(46213676)	C	MIR	SINE/MIR	(6)	256	9	4116303
745	13.7	0.8	2.3	chr9	94165547	94165677	(44229040)	+	AluJb	SINE/Alu	176	304	(8)	4119124
244	21.3	1.3	0.5	chr9	94165714	94165828	(44228889)	C	MIR	SINE/MIR	(98)	170	57	4119125
910	28.4	14.0	0.3	chr9	94238540	94238903	(44155814)	+	MLT2E	LTR/ERVL	1	422	(206)	4119245
18	11.6	0.0	0.0	chr9	94238905	94238932	(44155785)	+	(TC)n	Simple_repeat	1	28	(0)	4119246
2501	8.3	0.0	0.0	chr9	94238933	94239233	(44155484)	C	AluY	SINE/Alu	(10)	301	1	4119247
16	19.0	0.0	7.3	chr9	95426789	95426843	(42967874)	+	(CCCGG)n	Simple_repeat	1	55	(0)	4121215
23	3.7	0.0	0.0	chr9	95507906	95507933	(42886784)	+	(AC)n	Simple_repeat	1	28	(0)	4121303
28	24.6	0.0	0.0	chr9	95508033	95508095	(42886622)	+	(GT)n	Simple_repeat	1	63	(0)	4121304
18	15.0	2.1	4.1	chr9	95515932	95515979	(42878738)	+	(CTGCGG)n	Simple_repeat	1	49	(0)	4121313
357	32.1	8.6	2.5	chr9	95815504	95815666	(42579051)	C	MIRb	SINE/MIR	(93)	175	2	4121795
44	6.2	0.0	0.0	chr9	96162086	96162136	(42232581)	+	(CT)n	Simple_repeat	1	51	(0)	4122332
302	32.8	19.2	2.4	chr9	96162159	96162495	(42232222)	C	L3	LINE/CR1	(1399)	2700	2294	4122330
4412	6.5	0.4	0.2	chr9	96420849	96421401	(41973316)	+	MER41A	LTR/ERV1	1	554	(0)	4122837
1395	13.1	11.2	0.0	chr9	97009572	97009792	(41384925)	C	AluSz	SINE/Alu	(9)	303	55	4123845
1919	16.3	6.1	8.3	chr9	97009793	97010045	(41384672)	+	MSTB	LTR/ERVL-MaLR	165	426	(0)	4123844
2324	5.7	0.3	7.3	chr9	97010053	97010369	(41384348)	C	AluSc	SINE/Alu	(13)	296	2	4123846
218	28.4	2.6	2.6	chr9	97468906	97468981	(40925736)	+	MIRc	SINE/MIR	177	252	(16)	4124550
308	28.4	11.8	9.7	chr9	97696884	97697140	(40697577)	C	L1M4b	LINE/L1	(6203)	664	402	4124935
2280	11.7	3.7	1.6	chr9	97744091	97744463	(40650254)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4125041
547	30.5	16.1	5.4	chr9	97961432	97962024	(40432693)	+	L3	LINE/CR1	3253	3921	(178)	4125488
32	26.8	1.8	1.8	chr9	97983153	97983272	(40411445)	+	(CGCCG)n	Simple_repeat	1	120	(0)	4125544
29	16.5	0.0	0.0	chr9	98104524	98104572	(40290145)	+	GA-rich	Low_complexity	1	49	(0)	4125813
290	22.6	8.2	5.3	chr9	98150629	98150759	(40243958)	+	Charlie19a	DNA/hAT-Charlie	192	326	(60)	4125927
476	26.1	7.0	0.0	chr9	98316517	98316635	(40078082)	C	L2a	LINE/L2	(0)	3426	3299	4126289
786	29.0	5.2	1.2	chr9	98316715	98316955	(40077762)	C	MIRb	SINE/MIR	(6)	262	12	4126290
245	29.9	4.4	0.0	chr9	98329729	98329815	(40064902)	C	L1ME3Cz	LINE/L1	(26)	971	881	4126314
12	21.7	0.0	2.9	chr9	98329817	98329851	(40064866)	+	(CTCCC)n	Simple_repeat	1	35	(0)	4126315
28	13.7	9.1	0.0	chr9	98329852	98329881	(40064836)	+	(TC)n	Simple_repeat	2	72	(0)	4126316
231	19.4	4.3	0.0	chr9	98329960	98330026	(40064691)	C	L1MC5a	LINE/L1	(244)	2533	2464	4126317
1530	20.9	0.7	2.3	chr9	98664986	98665262	(39729455)	+	AluJb	SINE/Alu	2	274	(38)	4126970
36	5.2	0.0	0.0	chr9	98665263	98665302	(39729415)	+	(TC)n	Simple_repeat	1	40	(0)	4126971
1530	20.9	0.7	2.3	chr9	98665303	98665330	(39729387)	+	AluJb	SINE/Alu	275	302	(10)	4126970
6157	28.2	6.8	5.9	chr9	98665331	98665651	(39729066)	+	ERV3-16A3_I-int	LTR/ERVL	2752	3085	(2141)	4126968
3664	22.9	11.6	4.7	chr9	98856536	98857537	(39537180)	C	MLT1E1-int	LTR/ERVL-MaLR	(5)	1484	414	4127354
41	0.0	0.0	0.0	chr9	98857538	98857572	(39537145)	+	(CT)n	Simple_repeat	1	35	(0)	4127355
3664	23.3	10.5	5.8	chr9	98857573	98857674	(39537043)	C	MLT1E1-int	LTR/ERVL-MaLR	(1076)	413	324	4127354
16	0.0	4.3	0.0	chr9	98857693	98857715	(39537002)	+	(AAAT)n	Simple_repeat	1	24	(0)	4127356
405	27.1	11.6	8.2	chr9	98863434	98863471	(39531246)	+	HAL1	LINE/L1	2186	2224	(283)	4127369
37	2.8	0.0	0.0	chr9	98863472	98863507	(39531210)	+	(TG)n	Simple_repeat	1	36	(0)	4127370
405	27.1	11.6	8.2	chr9	98863508	98863602	(39531115)	+	HAL1	LINE/L1	2225	2305	(202)	4127369
2407	9.3	0.0	0.0	chr9	98863603	98863902	(39530815)	+	AluSx1	SINE/Alu	1	300	(12)	4127371
265	30.8	7.7	0.0	chr9	98877976	98878095	(39516622)	+	MLT1J	LTR/ERVL-MaLR	3	132	(380)	4127401
1381	14.0	3.2	0.4	chr9	98878168	98878192	(39516525)	+	Tigger7	DNA/TcMar-Tigger	2233	2258	(233)	4127402
47	2.3	0.0	0.0	chr9	98878193	98878237	(39516480)	+	(GA)n	Simple_repeat	1	45	(0)	4127403
1381	14.0	3.2	0.4	chr9	98878238	98878455	(39516262)	+	Tigger7	DNA/TcMar-Tigger	2259	2482	(9)	4127402
1734	10.6	10.3	0.4	chr9	98893838	98894091	(39500626)	+	AluSx1	SINE/Alu	1	282	(30)	4127440
16	0.0	0.0	0.0	chr9	98894092	98894108	(39500609)	+	(CT)n	Simple_repeat	1	17	(0)	4127441
46	2.3	0.0	0.0	chr9	98894109	98894152	(39500565)	+	(CA)n	Simple_repeat	1	44	(0)	4127442
34	19.9	1.3	0.0	chr9	98973206	98973281	(39421436)	+	GA-rich	Low_complexity	1	77	(0)	4127619
53	24.2	5.9	5.0	chr9	99244742	99245027	(39149690)	+	GA-rich	Low_complexity	1	303	(0)	4128075
5070	8.3	1.7	0.2	chr9	99301912	99302535	(39092182)	+	MER41B	LTR/ERV1	1	634	(0)	4128193
1219	28.5	9.9	0.0	chr9	99537512	99537929	(38856788)	C	LTR33	LTR/ERVL	(27)	488	25	4128658
17	0.0	0.0	0.0	chr9	99821691	99821741	(38572976)	+	(CG)n	Simple_repeat	1	51	(0)	4129131
21	33.6	1.3	0.0	chr9	99821957	99822034	(38572683)	+	(CA)n	Simple_repeat	1	79	(0)	4129132
1666	19.5	2.1	7.1	chr9	100379994	100380176	(38014541)	C	MLT1A	LTR/ERVL-MaLR	(2)	372	188	4130000
35	0.0	0.0	0.0	chr9	100380177	100380206	(38014511)	+	(CA)n	Simple_repeat	1	30	(0)	4130001
1666	19.5	2.1	7.1	chr9	100380207	100380414	(38014303)	C	MLT1A	LTR/ERVL-MaLR	(187)	187	1	4130000
15	11.7	0.0	0.0	chr9	104747886	104747913	(33646804)	+	(GAGGG)n	Simple_repeat	1	28	(0)	4136198
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
40	2.6	0.0	0.0	chr9	105883601	105883639	(32511078)	+	(TC)n	Simple_repeat	1	39	(0)	4138160
382	19.0	2.5	1.2	chr9	105883670	105883749	(32510968)	+	L2b	LINE/L2	3288	3368	(7)	4138161
85	1.3	0.0	0.0	chr9	106864040	106864116	(31530601)	+	(CT)n	Simple_repeat	1	77	(0)	4139698
17	16.4	0.0	0.0	chr9	106864157	106864190	(31530527)	+	(GCT)n	Simple_repeat	1	34	(0)	4139699
3210	14.8	2.8	15.4	chr9	107273746	107274364	(31120353)	C	MER73	LTR/ERVL	(3)	641	114	4140341
1514	26.5	14.2	1.6	chr9	108015621	108016198	(30378519)	+	L2a	LINE/L2	2746	3426	(0)	4142057
1604	24.5	9.6	2.1	chr9	108994652	108995168	(29399549)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	4143617
17	22.2	2.6	0.0	chr9	111898803	111898846	(26495871)	+	GA-rich	Low_complexity	1	45	(0)	4148760
398	27.8	4.4	0.0	chr9	111898885	111898992	(26495725)	C	L2a	LINE/L2	(1)	3425	3313	4148761
25	26.3	4.0	1.9	chr9	112073451	112073550	(26321167)	+	(CTCT)n	Simple_repeat	1	104	(0)	4149116
417	11.4	2.2	20.0	chr9	112170656	112170710	(26224007)	+	MER89	LTR/ERV1	1	44	(515)	4149302
30	0.0	0.0	0.0	chr9	112170711	112170736	(26223981)	+	(AG)n	Simple_repeat	1	26	(0)	4149303
2128	10.2	0.0	1.1	chr9	112170738	112171012	(26223705)	C	AluSx1	SINE/Alu	(40)	272	1	4149304
1731	18.6	0.3	2.2	chr9	112189344	112189358	(26205359)	C	AluJb	SINE/Alu	(1)	311	297	4149340
45	2.4	0.0	0.0	chr9	112189359	112189401	(26205316)	+	(TC)n	Simple_repeat	1	43	(0)	4149341
1731	18.6	0.3	2.2	chr9	112189402	112189702	(26205015)	C	AluJb	SINE/Alu	(16)	296	1	4149340
262	30.7	7.3	2.6	chr9	113221781	113221897	(25172820)	+	MIR1_Amn	SINE/MIR	20	142	(88)	4151224
2121	25.1	10.4	3.4	chr9	113364517	113365799	(25028918)	C	L1MC4	LINE/L1	(2)	8040	6606	4151524
2319	12.8	0.0	0.0	chr9	113365800	113366104	(25028613)	C	AluSz	SINE/Alu	(7)	305	1	4151525
100	15.7	0.9	3.7	chr9	113737972	113737985	(24656732)	+	(TCCT)n	Simple_repeat	1	14	(0)	4152292
56	9.7	2.2	0.0	chr9	113737986	113738076	(24656641)	+	(TC)n	Simple_repeat	1	93	(0)	4152293
100	15.7	0.9	3.7	chr9	113738077	113738276	(24656441)	+	(TCCT)n	Simple_repeat	3	196	(0)	4152294
26	6.3	0.0	0.0	chr9	113879381	113879413	(24515304)	+	(T)n	Simple_repeat	1	33	(0)	4152561
613	30.2	7.2	1.6	chr9	113884516	113884700	(24510017)	C	MER117	DNA/hAT-Charlie	(0)	197	2	4152576
47	2.3	0.0	0.0	chr9	113884775	113884819	(24509898)	+	(AG)n	Simple_repeat	1	45	(0)	4152577
369	26.2	4.5	6.1	chr9	113884820	113884933	(24509784)	C	MIR3	SINE/MIR	(82)	126	15	4152578
1984	9.2	8.4	0.0	chr9	114033128	114033389	(24361328)	+	AluSx1	SINE/Alu	1	286	(26)	4152835
37	0.0	0.0	0.0	chr9	114033390	114033421	(24361296)	+	(AG)n	Simple_repeat	1	32	(0)	4152836
289	27.2	4.6	3.1	chr9	114397685	114397813	(23996904)	+	MIR3	SINE/MIR	61	191	(17)	4153587
32	25.8	6.2	0.0	chr9	116337644	116337756	(22056961)	+	(TC)n	Simple_repeat	1	120	(0)	4157179
185	31.6	3.4	0.0	chr9	116437995	116438051	(21956666)	+	MIR3	SINE/MIR	76	134	(74)	4157391
78	24.2	1.9	1.4	chr9	116446097	116446309	(21948408)	+	GA-rich	Low_complexity	1	217	(0)	4157408
28	5.9	0.0	0.0	chr9	120363981	120364016	(18030701)	+	(GA)n	Simple_repeat	1	36	(0)	4164890
183	29.8	4.2	5.8	chr9	120364080	120364200	(18030517)	C	L2a	LINE/L2	(54)	3372	3254	4164891
16	13.4	4.7	2.2	chr9	120793486	120793528	(17601189)	+	(GGAGGTG)n	Simple_repeat	1	45	(0)	4165720
565	21.2	7.7	8.4	chr9	121370823	121370868	(17023849)	C	MER49	LTR/ERV1	(1)	767	720	4166863
2374	6.2	5.5	0.0	chr9	121370869	121371160	(17023557)	+	AluSx	SINE/Alu	1	309	(3)	4166864
30	0.0	0.0	0.0	chr9	122039862	122039887	(16354830)	+	(TC)n	Simple_repeat	1	26	(0)	4168173
24	3.6	0.0	0.0	chr9	122039888	122039916	(16354801)	+	(AC)n	Simple_repeat	1	29	(0)	4168174
1376	13.3	0.9	3.4	chr9	122051373	122051605	(16343112)	+	MER73	LTR/ERVL	1	227	(417)	4168195
29	7.5	2.4	0.0	chr9	122051612	122051653	(16343064)	+	(TC)n	Simple_repeat	1	43	(0)	4168196
1554	20.5	2.1	1.1	chr9	122991606	122991888	(15402829)	C	AluJr	SINE/Alu	(14)	298	13	4169922
409	30.7	18.7	0.5	chr9	123315557	123315786	(15078931)	+	MLT1K	LTR/ERVL-MaLR	4	275	(320)	4170482
33	0.0	0.0	0.0	chr9	123315881	123315908	(15078809)	+	(GA)n	Simple_repeat	1	28	(0)	4170483
583	27.5	3.0	1.8	chr9	123316027	123316189	(15078528)	C	MLT1K	LTR/ERVL-MaLR	(2)	593	429	4170484
30	0.0	0.0	0.0	chr9	123395469	123395494	(14999223)	+	(TG)n	Simple_repeat	1	26	(0)	4170643
23	7.0	0.0	0.0	chr9	123395497	123395526	(14999191)	+	(AG)n	Simple_repeat	1	30	(0)	4170644
72	6.8	0.0	0.0	chr9	123551977	123552069	(14842648)	+	(GA)n	Simple_repeat	1	93	(0)	4170911
423	24.9	15.3	4.7	chr9	123740638	123740806	(14653911)	C	MIRb	SINE/MIR	(15)	215	26	4171228
50	0.0	0.0	0.0	chr9	123740900	123740942	(14653775)	+	(GA)n	Simple_repeat	1	43	(0)	4171229
203	28.0	0.0	0.0	chr9	123740990	123741039	(14653678)	C	L2a	LINE/L2	(1)	3425	3376	4171230
3487	3.7	6.9	0.2	chr9	124143582	124144014	(14250703)	+	LTR7B	LTR/ERV1	1	464	(0)	4172030
549	16.5	0.0	0.0	chr9	124144046	124144124	(14250593)	+	AluJb	SINE/Alu	204	282	(30)	4172031
2234	8.5	0.3	5.3	chr9	124144137	124144320	(14250397)	C	AluSz	SINE/Alu	(7)	305	136	4172032
369	21.6	22.5	0.0	chr9	124217101	124217248	(14177469)	+	L2b	LINE/L2	2973	3163	(212)	4172171
51	0.0	0.0	0.0	chr9	124217250	124217293	(14177424)	+	(CA)n	Simple_repeat	1	44	(0)	4172172
23	0.0	0.0	0.0	chr9	124217294	124217318	(14177399)	+	(GA)n	Simple_repeat	1	25	(0)	4172173
597	29.4	4.8	0.1	chr9	124217377	124217603	(14177114)	C	MIR	SINE/MIR	(18)	250	3	4172174
36	28.0	3.0	4.1	chr9	124511976	124512142	(13882575)	+	GA-rich	Low_complexity	1	172	(0)	4172721
14	13.7	3.1	0.0	chr9	124512166	124512197	(13882520)	+	(GAGGTG)n	Simple_repeat	1	33	(0)	4172722
649	21.4	1.9	12.6	chr9	125126110	125126339	(13268378)	C	MLT1F1	LTR/ERVL-MaLR	(152)	417	213	4173946
36	0.0	0.0	0.0	chr9	125126393	125126423	(13268294)	+	(GT)n	Simple_repeat	1	31	(0)	4173947
17	23.3	3.9	1.9	chr9	125126424	125126475	(13268242)	+	GA-rich	Low_complexity	1	54	(0)	4173948
25	10.6	0.0	0.0	chr9	125126545	125126590	(13268127)	+	(GTGTGT)n	Simple_repeat	1	46	(0)	4173949
737	24.0	2.5	5.4	chr9	125126597	125126799	(13267918)	C	MLT1F1	LTR/ERVL-MaLR	(372)	197	1	4173946
2171	10.0	1.4	0.3	chr9	125156283	125156571	(13238146)	C	AluSc	SINE/Alu	(17)	292	1	4174009
37	0.0	0.0	0.0	chr9	125156745	125156776	(13237941)	+	(CT)n	Simple_repeat	1	32	(0)	4174010
2140	8.1	1.7	5.2	chr9	125156816	125156981	(13237736)	C	AluSx1	SINE/Alu	(15)	297	144	4174011
2599	3.7	0.3	0.0	chr9	125261138	125261433	(13133284)	+	AluY	SINE/Alu	1	297	(14)	4174294
17	8.1	3.9	0.0	chr9	125261471	125261496	(13133221)	+	(GA)n	Simple_repeat	1	27	(0)	4174295
53	0.0	0.0	0.0	chr9	126268644	126268688	(12126029)	+	(TG)n	Simple_repeat	1	45	(0)	4176147
2014	18.1	3.5	6.4	chr9	126567159	126567375	(11827342)	+	L1MD2	LINE/L1	5938	6150	(209)	4176601
34	0.0	0.0	0.0	chr9	126567376	126567404	(11827313)	+	(CA)n	Simple_repeat	1	29	(0)	4176604
2014	18.1	3.5	6.4	chr9	126567405	126567530	(11827187)	+	L1MD2	LINE/L1	6151	6275	(84)	4176601
17	19.0	2.4	0.0	chr9	126781890	126781931	(11612786)	+	G-rich	Low_complexity	1	43	(0)	4177042
211	33.0	10.8	0.9	chr9	126782244	126782359	(11612358)	C	MIRb	SINE/MIR	(24)	244	116	4177043
2095	12.7	1.6	0.0	chr9	126804478	126804784	(11589933)	C	AluSz	SINE/Alu	(0)	312	1	4177101
12	13.5	2.1	6.1	chr9	126952611	126952628	(11442089)	+	(TGTGGC)n	Simple_repeat	1	19	(0)	4177376
34	0.0	0.0	0.0	chr9	126952629	126952657	(11442060)	+	(GA)n	Simple_repeat	1	29	(0)	4177377
37	4.7	0.0	0.0	chr9	126952658	126952701	(11442016)	+	(TGTGTGTC)n	Simple_repeat	1	44	(0)	4177378
12	13.5	2.1	6.1	chr9	126952702	126952729	(11441988)	+	(TGTGGC)n	Simple_repeat	2	26	(0)	4177379
17	0.0	0.0	0.0	chr9	127361272	127361290	(11033427)	+	(AG)n	Simple_repeat	1	19	(0)	4178055
504	19.7	20.9	0.0	chr9	127361291	127361407	(11033310)	C	AluJr	SINE/Alu	(30)	282	135	4178056
185	26.4	10.3	3.3	chr9	127862141	127862230	(10532487)	+	MIRc	SINE/MIR	27	123	(145)	4179193
370	25.0	11.1	0.8	chr9	127968408	127968528	(10426189)	+	L2a	LINE/L2	3290	3424	(2)	4179429
782	28.8	6.2	2.8	chr9	127993752	127993998	(10400719)	C	MIR	SINE/MIR	(1)	261	6	4179492
2218	10.9	0.0	5.5	chr9	127994014	127994206	(10400511)	C	AluSx	SINE/Alu	(1)	311	136	4179493
1462	23.3	1.4	0.3	chr9	128296007	128296151	(10098566)	+	AluJb	SINE/Alu	1	146	(166)	4180172
2583	4.6	0.3	0.0	chr9	128296152	128296455	(10098262)	+	AluY	SINE/Alu	1	305	(6)	4180173
1462	23.3	1.4	0.3	chr9	128296456	128296596	(10098121)	+	AluJb	SINE/Alu	147	290	(22)	4180172
273	28.6	5.6	3.1	chr9	128296832	128296989	(10097728)	C	MIRb	SINE/MIR	(1)	261	99	4180174
13	8.5	0.0	14.0	chr9	128552779	128552828	(9841889)	+	(GGCGG)n	Simple_repeat	1	50	(0)	4180818
15	8.9	0.0	0.0	chr9	128689232	128689255	(9705462)	+	(AGG)n	Simple_repeat	1	24	(0)	4181103
17	9.7	2.9	2.8	chr9	128689312	128689346	(9705371)	+	(GCC)n	Simple_repeat	1	36	(0)	4181104
11	16.9	2.9	2.8	chr9	128689355	128689389	(9705328)	+	(GCCCGG)n	Simple_repeat	1	36	(0)	4181105
21	24.6	1.3	3.9	chr9	128689418	128689494	(9705223)	+	(GCGA)n	Simple_repeat	1	78	(0)	4181106
29	17.8	0.0	0.0	chr9	128787274	128787330	(9607387)	+	(GGC)n	Simple_repeat	1	57	(0)	4181331
23	8.1	4.9	2.3	chr9	128987048	128987088	(9407629)	+	GA-rich	Low_complexity	1	43	(0)	4181824
53	2.0	0.0	0.0	chr9	128987089	128987138	(9407579)	+	(GT)n	Simple_repeat	1	50	(0)	4181825
339	29.6	8.6	4.2	chr9	128987238	128987403	(9407314)	C	L1ME3B	LINE/L1	(336)	5906	5733	4181826
3037	11.0	2.3	0.5	chr9	129206854	129207273	(9187444)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4182317
60	1.5	4.5	0.0	chr9	129428367	129428432	(8966285)	+	(GT)n	Simple_repeat	1	69	(0)	4182801
33	2.5	2.4	0.0	chr9	129428433	129428473	(8966244)	+	(AG)n	Simple_repeat	1	42	(0)	4182802
234	31.4	9.9	0.8	chr9	129477141	129477259	(8917458)	+	MIR3	SINE/MIR	77	207	(1)	4182917
35	0.0	0.0	0.0	chr9	130189880	130189909	(8204808)	+	(AT)n	Simple_repeat	1	30	(0)	4184516
38	0.0	0.0	0.0	chr9	130190033	130190065	(8204652)	+	(AG)n	Simple_repeat	1	33	(0)	4184517
308	25.8	3.6	11.4	chr9	130190175	130190323	(8204394)	C	L2c	LINE/L2	(3)	3384	3248	4184518
668	30.0	4.0	4.0	chr9	130317132	130317384	(8077333)	+	MIRb	SINE/MIR	5	257	(11)	4184779
448	12.7	11.2	0.0	chr9	130317392	130317462	(8077255)	+	AluJr	SINE/Alu	197	276	(36)	4184780
46	0.0	0.0	0.0	chr9	130317468	130317506	(8077211)	+	(TC)n	Simple_repeat	1	39	(0)	4184781
1364	11.6	0.0	3.0	chr9	130317507	130317705	(8077012)	C	AluSx1	SINE/Alu	(25)	287	95	4184782
2173	11.3	5.0	4.2	chr9	130368570	130368947	(8025770)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4184885
38	0.0	0.0	0.0	chr9	130542925	130542957	(7851760)	+	(GA)n	Simple_repeat	1	33	(0)	4185262
18	12.8	0.0	0.0	chr9	132044438	132044471	(6350246)	+	(AGAGGG)n	Simple_repeat	1	34	(0)	4188117
339	26.1	9.0	0.0	chr9	132216295	132216405	(6178312)	C	MIR3	SINE/MIR	(81)	127	6	4188455
59	1.9	0.0	0.0	chr9	132216415	132216469	(6178248)	+	(TG)n	Simple_repeat	1	55	(0)	4188456
88	21.7	3.2	2.7	chr9	132978100	132978350	(5416367)	+	GA-rich	Low_complexity	1	259	(0)	4189844
14	19.1	3.9	3.7	chr9	132978389	132978440	(5416277)	+	(TTTAATAA)n	Simple_repeat	1	54	(0)	4189845
54	15.1	1.0	1.0	chr9	132999464	132999560	(5395157)	+	GA-rich	Low_complexity	1	98	(0)	4189890
12	4.9	0.0	4.3	chr9	133657376	133657398	(4737319)	+	(GCCA)n	Simple_repeat	1	23	(0)	4190906
92	3.9	6.0	0.0	chr9	133657399	133657531	(4737186)	+	(AG)n	Simple_repeat	1	141	(0)	4190907
47	0.0	0.0	0.0	chr9	134089773	134089812	(4304905)	+	(TG)n	Simple_repeat	1	40	(0)	4191530
35	6.8	0.0	0.0	chr9	134089813	134089858	(4304859)	+	(AG)n	Simple_repeat	1	46	(0)	4191531
102	28.2	2.0	1.7	chr9	134189348	134189691	(4205026)	+	GA-rich	Low_complexity	1	351	(0)	4191695
274	0.0	0.0	0.0	chr9	134445014	134445051	(3949666)	+	MSTA-int	LTR/ERVL-MaLR	1588	1625	(6)	4192020
1714	12.5	16.8	0.6	chr9	134445050	134445402	(3949315)	+	MSTA	LTR/ERVL-MaLR	7	428	(0)	4192020
894	20.0	6.8	3.4	chr9	135191003	135191314	(3203403)	C	MLT1F1	LTR/ERVL-MaLR	(16)	553	179	4192879
28	8.4	0.0	0.0	chr9	135191317	135191354	(3203363)	+	(AG)n	Simple_repeat	1	38	(0)	4192880
236	20.3	0.0	5.5	chr9	135191355	135191427	(3203290)	C	MLT1F1	LTR/ERVL-MaLR	(339)	221	153	4192879
17	35.5	0.0	0.0	chr9	135416305	135416366	(2978351)	+	(ACAC)n	Simple_repeat	1	62	(0)	4193184
31	13.7	1.8	0.0	chr9	135416463	135416490	(2978227)	+	(TC)n	Simple_repeat	1	28	(0)	4193185
1699	21.0	10.3	0.3	chr9	135416491	135416857	(2977860)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	4193186
11	17.1	2.9	2.8	chr9	136363573	136363607	(2031110)	+	(GCCCCA)n	Simple_repeat	1	36	(0)	4194302
15	13.2	6.8	2.1	chr9	136363715	136363758	(2030959)	+	(CCCGC)n	Simple_repeat	1	47	(0)	4194303
8105	7.0	1.0	0.1	chr9	136766299	136767296	(1627421)	+	LTR13	LTR/ERVK	1	1007	(0)	4194774
17	16.3	3.2	6.2	chr9	136848621	136848682	(1546035)	+	(CCCCGCG)n	Simple_repeat	1	64	(0)	4194874
15	28.2	1.1	6.5	chr9	136848951	136849042	(1545675)	+	G-rich	Low_complexity	1	93	(0)	4194875
3968	10.7	2.0	0.0	chr9	137075103	137075645	(1319072)	+	MER41A	LTR/ERV1	1	554	(0)	4195198
21	0.0	0.0	0.0	chr9	137954857	137954879	(439838)	+	(TG)n	Simple_repeat	1	23	(0)	4196374
41	4.8	0.0	0.0	chr9	137954880	137954923	(439794)	+	(GA)n	Simple_repeat	1	44	(0)	4196375
13	13.8	2.9	2.9	chr9	137954955	137954988	(439729)	+	G-rich	Low_complexity	1	35	(0)	4196376
1566	17.6	3.8	1.4	chrX	990176	990498	(155050397)	+	LTR9	LTR/ERV1	174	524	(120)	4359833
23	15.3	0.0	0.0	chrX	990505	990549	(155050346)	+	(CTCCCT)n	Simple_repeat	1	45	(0)	4359834
37	0.0	8.2	0.0	chrX	991311	991359	(155049536)	+	(TCTCTCTGTC)n	Simple_repeat	1	53	(0)	4359838
15	0.0	0.0	0.0	chrX	1661700	1661716	(154379179)	+	(TC)n	Simple_repeat	1	17	(0)	4361497
320	33.5	3.0	5.4	chrX	2244408	2244647	(153796248)	+	L4_C_Mam	LINE/RTE-X	4729	4962	(176)	4362469
275	11.8	7.8	0.5	chrX	2610249	2610822	(153430073)	+	(TC)n	Simple_repeat	1	619	(0)	4363231
1200	21.0	6.9	8.0	chrX	2922147	2922545	(153118350)	C	LTR52	LTR/ERVL	(5)	416	23	4363851
13	13.7	6.2	0.0	chrX	3066618	3066649	(152974246)	+	(TGT)n	Simple_repeat	1	34	(0)	4364165
58	23.4	5.2	1.5	chrX	3711734	3711935	(152328960)	+	GA-rich	Low_complexity	1	209	(0)	4365420
63	0.0	0.0	0.0	chrX	7899627	7899680	(148141215)	+	(GA)n	Simple_repeat	1	54	(0)	4372364
2344	12.2	3.3	2.5	chrX	7899834	7900194	(148140701)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4372365
43	0.0	0.0	2.4	chrX	9316668	9316708	(146724187)	+	(CT)n	Simple_repeat	1	41	(0)	4374550
15	14.9	2.6	2.5	chrX	9420206	9420244	(146620651)	+	G-rich	Low_complexity	1	40	(0)	4374742
19	24.5	2.9	4.2	chrX	9420295	9420363	(146620532)	+	(CT)n	Simple_repeat	1	71	(0)	4374743
506	26.4	2.7	3.4	chrX	9420481	9420629	(146620266)	C	MIR	SINE/MIR	(12)	250	103	4374744
73	11.5	0.0	0.0	chrX	10175856	10175971	(145864924)	+	(CT)n	Simple_repeat	1	116	(0)	4376068
16	5.3	0.0	0.0	chrX	10175972	10175991	(145864904)	+	(GT)n	Simple_repeat	1	20	(0)	4376069
66	5.7	0.0	0.0	chrX	10566498	10566571	(145474324)	+	(TC)n	Simple_repeat	1	74	(0)	4376673
47	8.4	0.0	0.0	chrX	11266011	11266073	(144774822)	+	(GT)n	Simple_repeat	1	63	(0)	4377746
36	21.8	4.1	0.0	chrX	11266074	11266159	(144774736)	+	GA-rich	Low_complexity	11	100	(0)	4377747
608	29.1	11.9	0.7	chrX	11353902	11354185	(144686710)	+	LTR82A	LTR/ERVL	553	872	(0)	4377890
315	29.1	1.2	0.0	chrX	11354186	11354264	(144686631)	+	MIRb	SINE/MIR	162	241	(27)	4377891
67	1.6	0.0	0.0	chrX	11354267	11354328	(144686567)	+	(CT)n	Simple_repeat	1	62	(0)	4377892
25	0.0	0.0	0.0	chrX	11354329	11354356	(144686539)	+	(AT)n	Simple_repeat	1	28	(0)	4377893
30	24.9	0.0	0.0	chrX	11354359	11354431	(144686464)	+	(TCA)n	Simple_repeat	1	73	(0)	4377894
404	36.4	7.1	0.0	chrX	11461208	11461391	(144579504)	C	L2a	LINE/L2	(319)	3107	2910	4378050
281	32.3	3.6	1.5	chrX	11461431	11461565	(144579330)	+	L2b	LINE/L2	3238	3375	(0)	4378051
551	28.4	10.2	6.9	chrX	12872180	12872527	(143168368)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	195	4380244
25	18.2	0.0	0.0	chrX	12872531	12872575	(143168320)	+	GA-rich	Low_complexity	1	45	(0)	4380245
233	22.4	11.5	1.2	chrX	12872621	12872706	(143168189)	+	L2a	LINE/L2	1842	1937	(1482)	4380246
47	0.0	0.0	0.0	chrX	13026095	13026134	(143014761)	+	(GA)n	Simple_repeat	1	40	(0)	4380500
522	24.4	1.4	4.3	chrX	13388604	13388741	(142652154)	C	L1MC4	LINE/L1	(1)	8041	7917	4381084
51	0.0	0.0	0.0	chrX	13388742	13388785	(142652110)	+	(CA)n	Simple_repeat	1	44	(0)	4381085
522	24.7	5.7	13.3	chrX	13388786	13388967	(142651928)	C	L1MC4	LINE/L1	(126)	7916	7759	4381084
1934	13.8	5.0	1.9	chrX	15165983	15166351	(140874544)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4383884
74	4.8	2.3	0.0	chrX	15498536	15498623	(140542272)	+	(CT)n	Simple_repeat	1	90	(0)	4384477
630	12.1	0.0	0.0	chrX	15524332	15524430	(140516465)	C	L1MB2	LINE/L1	(4)	6167	6069	4384512
1602	30.4	9.3	4.2	chrX	15537366	15537963	(140502932)	C	MER115	DNA/hAT-Tip100	(1)	692	61	4384534
61	7.5	5.0	0.0	chrX	15538133	15538233	(140502662)	+	(TC)n	Simple_repeat	1	106	(0)	4384535
561	16.2	7.9	5.4	chrX	15538284	15538394	(140502501)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	4384536
3543	13.4	1.3	7.4	chrX	15747779	15748430	(140292465)	C	LTR9	LTR/ERV1	(0)	612	1	4384890
791	28.9	6.4	3.3	chrX	16771508	16771808	(139269087)	+	AluJb	SINE/Alu	2	312	(0)	4386663
583	17.8	4.8	6.3	chrX	16888111	16888162	(139152733)	C	Arthur1B	DNA/hAT-Tip100	(1099)	126	80	4386905
228	12.1	0.0	0.0	chrX	16888162	16888194	(139152701)	C	Arthur1B	DNA/hAT-Tip100	(1188)	37	5	4386905
34	9.1	0.0	0.0	chrX	16888266	16888312	(139152583)	+	(TC)n	Simple_repeat	1	47	(0)	4386909
50	2.2	0.0	0.0	chrX	16888314	16888360	(139152535)	+	(AC)n	Simple_repeat	1	47	(0)	4386910
1104	23.5	9.4	0.3	chrX	16888361	16888706	(139152189)	C	L2a	LINE/L2	(20)	3406	3026	4386911
25	0.0	0.0	0.0	chrX	17362444	17362471	(138678424)	+	(CT)n	Simple_repeat	1	28	(0)	4387723
43	0.0	0.0	0.0	chrX	17362472	17362508	(138678387)	+	(CA)n	Simple_repeat	1	37	(0)	4387724
274	30.1	1.2	0.0	chrX	17362509	17362591	(138678304)	C	LTR104_Mam	LTR/Gypsy	(1109)	400	317	4387725
2349	13.4	11.0	1.8	chrX	18030652	18031039	(138009856)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4388794
433	24.6	10.8	5.2	chrX	18031040	18031217	(138009678)	+	MLT1C	LTR/ERVL-MaLR	162	352	(115)	4388793
4004	19.8	5.0	5.8	chrX	18190064	18190766	(137850129)	+	L1MD2	LINE/L1	5483	6150	(209)	4389056
34	3.0	0.0	0.0	chrX	18190767	18190800	(137850095)	+	(CA)n	Simple_repeat	1	34	(0)	4389058
4004	19.8	5.0	5.8	chrX	18190801	18190951	(137849944)	+	L1MD2	LINE/L1	6151	6302	(57)	4389056
79	1.4	1.3	0.0	chrX	19760010	19760084	(136280811)	+	(TC)n	Simple_repeat	1	76	(0)	4391895
16	0.0	0.0	0.0	chrX	19760086	19760103	(136280792)	+	(AC)n	Simple_repeat	1	18	(0)	4391896
2322	9.7	0.0	0.0	chrX	19760106	19760394	(136280501)	+	AluY	SINE/Alu	1	289	(22)	4391897
2487	4.4	0.7	1.7	chrX	19872490	19872784	(136168111)	+	AluY	SINE/Alu	1	292	(19)	4392114
25	8.3	2.6	0.0	chrX	19872796	19872833	(136168062)	+	(TC)n	Simple_repeat	1	39	(0)	4392115
37	0.0	0.0	0.0	chrX	19872834	19872865	(136168030)	+	(CA)n	Simple_repeat	1	32	(0)	4392116
46	2.3	0.0	0.0	chrX	23742214	23742257	(132298638)	+	(GA)n	Simple_repeat	1	44	(0)	4397947
276	21.1	8.4	2.6	chrX	24171684	24171761	(131869134)	C	MLT1O	LTR/ERVL-MaLR	(52)	490	408	4398991
48	0.0	4.2	0.0	chrX	24171895	24171942	(131868953)	+	(AG)n	Simple_repeat	1	50	(0)	4398992
1743	17.1	6.9	3.3	chrX	30818057	30818418	(125222477)	+	MSTA	LTR/ERVL-MaLR	26	401	(27)	4408821
56	3.6	0.0	0.0	chrX	30818461	30818517	(125222378)	+	(TC)n	Simple_repeat	1	57	(0)	4408822
18	4.8	0.0	0.0	chrX	30818518	30818539	(125222356)	+	(GT)n	Simple_repeat	1	22	(0)	4408823
6259	7.2	3.9	0.3	chrX	30818546	30818891	(125222004)	C	L1PB1	LINE/L1	(2)	6149	5784	4408824
345	15.4	4.9	4.9	chrX	30976899	30976980	(125063915)	+	L1MC4	LINE/L1	7157	7238	(804)	4409089
47	0.0	0.0	0.0	chrX	30977006	30977045	(125063850)	+	(GA)n	Simple_repeat	1	40	(0)	4409090
436	22.9	0.8	3.9	chrX	30977050	30977176	(125063719)	+	L1MC4	LINE/L1	7919	8041	(1)	4409082
211	22.9	24.7	0.0	chrX	30977182	30977251	(125063644)	C	L2	LINE/L2	(1320)	2099	2007	4409091
43	0.0	0.0	0.0	chrX	31343583	31343619	(124697276)	+	(GT)n	Simple_repeat	1	37	(0)	4409644
30	21.3	0.0	2.7	chrX	31343620	31343691	(124697204)	+	GA-rich	Low_complexity	3	72	(0)	4409645
2260	11.4	0.0	0.0	chrX	31394513	31394801	(124646094)	+	AluSx	SINE/Alu	2	290	(22)	4409732
30	5.0	2.4	0.0	chrX	31394922	31394962	(124645933)	+	(GA)n	Simple_repeat	1	42	(0)	4409733
30	0.0	0.0	0.0	chrX	31709556	31709581	(124331314)	+	(CT)n	Simple_repeat	1	26	(0)	4410218
40	0.0	2.6	0.0	chrX	31709585	31709622	(124331273)	+	(TG)n	Simple_repeat	1	39	(0)	4410219
62	1.8	0.0	0.0	chrX	31943872	31943928	(124096967)	+	(AG)n	Simple_repeat	1	57	(0)	4410594
1630	17.4	8.1	3.0	chrX	31944103	31944475	(124096420)	+	Charlie1b	DNA/hAT-Charlie	1	394	(129)	4410595
19	0.0	0.0	0.0	chrX	37512670	37512690	(118528205)	+	(TC)n	Simple_repeat	1	21	(0)	4417507
33	3.1	0.0	0.0	chrX	37512694	37512726	(118528169)	+	(TG)n	Simple_repeat	1	33	(0)	4417508
36	2.9	0.0	0.0	chrX	37687159	37687193	(118353702)	+	(TC)n	Simple_repeat	1	35	(0)	4417776
53	0.0	0.0	0.0	chrX	38680540	38680584	(117360311)	+	(TC)n	Simple_repeat	1	45	(0)	4419341
41	0.0	0.0	0.0	chrX	38844434	38844468	(117196427)	+	(GT)n	Simple_repeat	1	35	(0)	4419589
24	0.0	0.0	0.0	chrX	38844469	38844495	(117196400)	+	(AG)n	Simple_repeat	1	27	(0)	4419590
1104	24.2	5.2	3.9	chrX	38868066	38868188	(117172707)	+	MER115	DNA/hAT-Tip100	332	458	(235)	4419624
31	3.3	0.0	0.0	chrX	38868189	38868219	(117172676)	+	(CT)n	Simple_repeat	1	31	(0)	4419625
1104	24.2	5.2	3.9	chrX	38868220	38868452	(117172443)	+	MER115	DNA/hAT-Tip100	459	693	(0)	4419624
25	12.7	2.3	0.0	chrX	38895249	38895299	(117145596)	+	GA-rich	Low_complexity	1	52	(0)	4419678
30	0.0	0.0	0.0	chrX	38895314	38895339	(117145556)	+	(GA)n	Simple_repeat	1	26	(0)	4419679
666	26.2	1.6	2.1	chrX	38895415	38895605	(117145290)	+	MER103C	DNA/hAT-Charlie	1	190	(107)	4419680
47	0.0	0.0	0.0	chrX	39687505	39687544	(116353351)	+	(CT)n	Simple_repeat	1	40	(0)	4420981
50	0.0	0.0	0.0	chrX	39936547	39936589	(116104306)	+	(TC)n	Simple_repeat	1	43	(0)	4421475
329	28.9	8.8	3.6	chrX	40117668	40117807	(115923088)	+	MIRb	SINE/MIR	2	149	(119)	4421792
25	28.4	2.6	0.0	chrX	40117950	40118027	(115922868)	+	(CT)n	Simple_repeat	1	80	(0)	4421793
212	35.5	9.3	4.9	chrX	40292272	40292517	(115748378)	C	L2c	LINE/L2	(0)	3387	3130	4422165
41	0.0	2.6	0.0	chrX	40292519	40292557	(115748338)	+	(TC)n	Simple_repeat	1	40	(0)	4422166
37	0.0	0.0	0.0	chrX	40292663	40292696	(115748199)	+	(T)n	Simple_repeat	1	34	(0)	4422167
2153	14.4	10.7	2.0	chrX	40303712	40304101	(115736794)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4422192
2247	6.7	0.7	1.8	chrX	40793824	40794107	(115246788)	+	AluSp	SINE/Alu	1	281	(32)	4423107
69	0.0	0.0	0.0	chrX	40794112	40794170	(115246725)	+	(AG)n	Simple_repeat	1	59	(0)	4423108
11808	14.7	0.2	1.3	chrX	40794171	40794362	(115246533)	C	MER52-int	LTR/ERV1	(2050)	5041	4859	4423106
1073	24.4	12.4	6.7	chrX	41125375	41125643	(114915252)	C	L1M5	LINE/L1	(2664)	3482	3175	4423724
49	0.0	0.0	0.0	chrX	41125644	41125685	(114915210)	+	(AC)n	Simple_repeat	1	42	(0)	4423726
1073	24.4	12.4	6.7	chrX	41125686	41125852	(114915043)	C	L1M5	LINE/L1	(2972)	3174	3015	4423724
520	20.2	1.6	7.0	chrX	41350640	41350768	(114690127)	+	FLAM_C	SINE/Alu	1	122	(21)	4424181
67	21.9	0.0	0.7	chrX	41527177	41527320	(114513575)	+	GA-rich	Low_complexity	1	144	(0)	4424612
544	29.4	9.6	0.8	chrX	42989835	42990081	(113050814)	C	LTR86A2	LTR/ERVL	(78)	430	160	4426725
42	0.0	0.0	0.0	chrX	42990084	42990119	(113050776)	+	(TC)n	Simple_repeat	1	36	(0)	4426726
31	0.0	0.0	0.0	chrX	42990120	42990153	(113050742)	+	(AC)n	Simple_repeat	1	34	(0)	4426727
45	11.3	0.0	0.0	chrX	43973454	43973520	(112067375)	+	(AG)n	Simple_repeat	1	67	(0)	4428093
21	9.7	3.0	0.0	chrX	44314587	44314619	(111726276)	+	(TC)n	Simple_repeat	1	34	(0)	4428623
19	19.2	0.0	0.0	chrX	44314619	44314654	(111726241)	+	(CA)n	Simple_repeat	1	36	(0)	4428624
442	25.8	6.6	16.0	chrX	44709576	44709676	(111331219)	C	Tigger15a	DNA/TcMar-Tigger	(235)	480	390	4429538
56	0.0	0.0	0.0	chrX	44709677	44709724	(111331171)	+	(TG)n	Simple_repeat	1	48	(0)	4429539
442	25.8	6.6	16.0	chrX	44709725	44709745	(111331150)	C	Tigger15a	DNA/TcMar-Tigger	(326)	389	389	4429538
2096	11.6	0.0	0.7	chrX	44709746	44710029	(111330866)	C	AluSx1	SINE/Alu	(30)	282	1	4429540
56	0.0	0.0	0.0	chrX	45153475	45153522	(110887373)	+	(TG)n	Simple_repeat	1	48	(0)	4430389
40	5.6	3.6	0.0	chrX	45153525	45153580	(110887315)	+	(AG)n	Simple_repeat	1	58	(0)	4430390
2369	9.4	0.0	0.0	chrX	46626278	46626574	(109414321)	C	AluSx1	SINE/Alu	(15)	297	1	4432486
1914	15.5	12.6	0.8	chrX	46626581	46626957	(109413938)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4432487
20	4.2	0.0	0.0	chrX	46917762	46917786	(109123109)	+	(TC)n	Simple_repeat	1	25	(0)	4433048
91	0.9	4.1	3.9	chrX	46917800	46917921	(109122974)	+	(TC)n	Simple_repeat	1	127	(0)	4433048
1889	19.8	11.9	5.1	chrX	47086406	47086734	(108954161)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	190	4433356
67	1.6	0.0	0.0	chrX	47086735	47086796	(108954099)	+	(GA)n	Simple_repeat	1	62	(0)	4433357
1889	19.8	11.9	5.1	chrX	47086797	47086973	(108953922)	C	MLT1F	LTR/ERVL-MaLR	(359)	189	1	4433356
20	7.2	3.3	0.0	chrX	47484152	47484181	(108556714)	+	(AG)n	Simple_repeat	1	31	(0)	4434265
32	0.0	3.2	0.0	chrX	48471409	48471439	(107569456)	+	(TC)n	Simple_repeat	1	32	(0)	4436142
17	0.0	0.0	0.0	chrX	48471440	48471458	(107569437)	+	(AC)n	Simple_repeat	1	19	(0)	4436143
888	23.3	7.0	3.6	chrX	48547019	48547267	(107493628)	C	MIR	SINE/MIR	(1)	261	4	4436301
23	20.8	3.6	0.0	chrX	48547305	48547359	(107493536)	+	GA-rich	Low_complexity	1	57	(0)	4436302
329	30.0	1.1	0.0	chrX	48547409	48547498	(107493397)	+	MIRc	SINE/MIR	69	159	(109)	4436303
55704	5.4	1.1	0.9	chrX	48854173	48856604	(107184291)	+	Harlequin-int	LTR/ERV1	1	2443	(4453)	4436977
1942	14.1	0.0	0.0	chrX	49291003	49291272	(106749623)	C	AluJb	SINE/Alu	(28)	284	15	4437859
51	2.1	0.0	0.0	chrX	49291289	49291336	(106749559)	+	(TC)n	Simple_repeat	1	48	(0)	4437860
2180	11.4	0.7	0.0	chrX	49291338	49291627	(106749268)	C	AluSx	SINE/Alu	(20)	292	1	4437861
76	1.1	6.7	0.0	chrX	49843295	49843384	(106197511)	+	(TC)n	Simple_repeat	1	96	(0)	4438460
64	1.7	0.0	0.0	chrX	50007380	50007438	(106033457)	+	(TC)n	Simple_repeat	1	59	(0)	4438735
40	0.0	0.0	0.0	chrX	50007441	50007474	(106033421)	+	(CA)n	Simple_repeat	1	34	(0)	4438736
48	0.0	0.0	0.0	chrX	50191620	50191660	(105849235)	+	(GT)n	Simple_repeat	1	41	(0)	4439044
30	7.5	0.0	2.3	chrX	50191661	50191697	(105849198)	+	(AG)n	Simple_repeat	1	37	(0)	4439045
470	9.9	1.4	0.0	chrX	50191749	50191819	(105849076)	C	MER96	DNA/hAT-Tip100	(0)	175	104	4439046
17	0.0	0.0	0.0	chrX	50204659	50204677	(105836218)	+	(A)n	Simple_repeat	1	19	(0)	4439056
18	0.0	0.0	0.0	chrX	50204816	50204835	(105836060)	+	(CT)n	Simple_repeat	1	20	(0)	4439057
13	21.3	0.0	0.0	chrX	50204850	50204882	(105836013)	+	(TTTTG)n	Simple_repeat	1	33	(0)	4439058
15	18.4	5.4	0.0	chrX	50204992	50205028	(105835867)	+	(TA)n	Simple_repeat	1	39	(0)	4439059
1147	20.3	13.1	7.7	chrX	50880325	50880508	(105160387)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	181	4440000
39	2.7	0.0	0.0	chrX	50880509	50880546	(105160349)	+	(GA)n	Simple_repeat	1	38	(0)	4440001
1147	20.3	13.1	7.7	chrX	50880547	50880713	(105160182)	C	MLT1A	LTR/ERVL-MaLR	(194)	180	2	4440000
2100	20.1	4.4	0.0	chrX	50880714	50881130	(105159765)	C	MLT1A-int	LTR/ERVL-MaLR	(0)	1735	1300	4440000
1716	13.8	4.4	2.2	chrX	51873073	51873383	(104167512)	C	THE1C	LTR/ERVL-MaLR	(57)	318	1	4441251
12	16.6	4.5	4.3	chrX	51873447	51873490	(104167405)	+	(ATAGTC)n	Simple_repeat	1	46	(0)	4441252
20	13.9	0.0	0.0	chrX	51873503	51873534	(104167361)	+	(GT)n	Simple_repeat	1	32	(0)	4441253
30	0.0	0.0	0.0	chrX	51873535	51873560	(104167335)	+	(GA)n	Simple_repeat	1	26	(0)	4441254
31	0.0	2.9	2.8	chrX	53072383	53072417	(102968478)	+	(TC)n	Simple_repeat	1	36	(0)	4442997
90	33.8	2.5	1.4	chrX	53072418	53072695	(102968200)	+	(CT)n	Simple_repeat	1	282	(0)	4442998
25	9.4	0.0	0.0	chrX	53072711	53072753	(102968142)	+	(GA)n	Simple_repeat	1	43	(0)	4442999
235	33.9	4.8	0.2	chrX	54640098	54640214	(101400681)	+	L2c	LINE/L2	3224	3343	(44)	4446205
2576	25.3	12.3	5.4	chrX	54990062	54991539	(101049356)	+	L1ME3A	LINE/L1	3025	4624	(1522)	4446606
39	6.7	0.0	0.0	chrX	54991540	54991586	(101049309)	+	(TG)n	Simple_repeat	1	47	(0)	4446608
2576	25.3	12.3	5.4	chrX	54991587	54991688	(101049207)	+	L1ME3A	LINE/L1	4625	4729	(1417)	4446606
532	23.9	12.8	1.6	chrX	54991684	54991870	(101049025)	+	L1ME3A	LINE/L1	5675	5885	(288)	4446606
20	12.0	2.6	2.6	chrX	55015922	55015959	(101024936)	+	(TC)n	Simple_repeat	1	39	(0)	4446650
64	7.0	0.0	0.0	chrX	55015960	55016036	(101024859)	+	(TG)n	Simple_repeat	1	77	(0)	4446651
11874	12.8	2.8	2.1	chrX	55204867	55207129	(100833766)	C	MER83B-int	LTR/ERV1	(1629)	3251	1191	4446893
46	0.0	0.0	0.0	chrX	55207130	55207168	(100833727)	+	(AG)n	Simple_repeat	1	39	(0)	4446896
3383	14.6	10.0	3.7	chrX	55207169	55207893	(100833002)	C	MER83B-int	LTR/ERV1	(5835)	1702	447	4446893
24	11.2	0.0	0.0	chrX	55490195	55490234	(100550661)	+	(GAGA)n	Simple_repeat	1	40	(0)	4447196
377	26.2	7.8	7.2	chrX	55490247	55490398	(100550497)	+	MIRc	SINE/MIR	13	165	(103)	4447197
23	11.5	2.6	0.0	chrX	65588809	65588846	(90452049)	+	(CT)n	Simple_repeat	1	39	(0)	4452574
17	16.4	0.0	0.0	chrX	65588945	65588978	(90451917)	+	(GCT)n	Simple_repeat	1	34	(0)	4452575
4871	16.9	0.9	3.9	chrX	65611460	65612055	(90428840)	C	L1MB2	LINE/L1	(263)	5908	5311	4452624
1972	16.0	7.6	1.9	chrX	65612056	65612425	(90428470)	+	MSTD	LTR/ERVL-MaLR	1	393	(3)	4452626
328	30.8	11.6	1.6	chrX	66014970	66015156	(90025739)	+	MIRc	SINE/MIR	1	200	(8)	4453224
897	31.0	1.7	1.7	chrX	66018210	66018439	(90022456)	C	MIRb	SINE/MIR	(8)	260	31	4453229
17	4.9	0.0	0.0	chrX	66021167	66021187	(90019708)	+	(CT)n	Simple_repeat	1	21	(0)	4453233
34	0.0	0.0	0.0	chrX	66021193	66021221	(90019674)	+	(CA)n	Simple_repeat	1	29	(0)	4453234
17	23.0	2.4	0.0	chrX	68584486	68584526	(87456369)	+	GA-rich	Low_complexity	1	42	(0)	4456613
2817	21.1	9.4	3.5	chrX	68584683	68585389	(87455506)	+	L1MC5	LINE/L1	8277	9015	(289)	4456614
18380	14.3	5.9	5.7	chrX	68588261	68589872	(87451023)	+	L1MA2	LINE/L1	12	1752	(5813)	4456621
40	0.0	0.0	0.0	chrX	68589873	68589906	(87450989)	+	(GA)n	Simple_repeat	1	34	(0)	4456622
18380	14.3	5.9	5.7	chrX	68589907	68591376	(87449519)	+	L1MA2	LINE/L1	1753	3201	(4364)	4456621
23	0.0	0.0	0.0	chrX	68902046	68902070	(87138825)	+	(TG)n	Simple_repeat	1	25	(0)	4457180
37	0.0	0.0	0.0	chrX	68902071	68902102	(87138793)	+	(GA)n	Simple_repeat	1	32	(0)	4457181
10298	9.2	1.6	2.5	chrX	70998146	70998804	(85042091)	C	L1MA3	LINE/L1	(5139)	2426	1757	4460575
51	1.9	1.9	0.0	chrX	70998805	70998856	(85042039)	+	(TC)n	Simple_repeat	1	53	(0)	4460583
10298	9.2	1.6	2.5	chrX	70998857	70998885	(85042010)	C	L1MA3	LINE/L1	(5809)	1756	1728	4460575
31	13.7	6.0	0.0	chrX	71146104	71146153	(84894742)	+	(CT)n	Simple_repeat	1	52	(0)	4460882
75	1.5	0.0	0.0	chrX	71146154	71146221	(84894674)	+	(CA)n	Simple_repeat	1	68	(0)	4460883
31	13.7	6.0	0.0	chrX	71146222	71146237	(84894658)	+	(CT)n	Simple_repeat	1	18	(0)	4460884
24	3.5	0.0	0.0	chrX	71942948	71942972	(84097923)	+	(CT)n	Simple_repeat	1	25	(0)	4462416
41	0.0	0.0	0.0	chrX	71942973	71943007	(84097888)	+	(TG)n	Simple_repeat	1	35	(0)	4462417
879	15.2	0.0	0.0	chrX	71943123	71943247	(84097648)	C	FLAM_A	SINE/Alu	(14)	128	4	4462418
14	23.3	2.2	0.0	chrX	72148681	72148725	(83892170)	+	(AGCAATG)n	Simple_repeat	1	46	(0)	4462779
273	16.0	2.0	0.0	chrX	72148761	72148810	(83892085)	+	MER5A	DNA/hAT-Charlie	1	51	(138)	4462780
18	8.7	0.0	0.0	chrX	72148811	72148835	(83892060)	+	(AG)n	Simple_repeat	1	25	(0)	4462781
44	4.3	0.0	0.0	chrX	72148836	72148884	(83892011)	+	(GTGT)n	Simple_repeat	1	49	(0)	4462782
2048	19.1	9.2	6.7	chrX	77937259	77937875	(78103020)	+	L1ME1	LINE/L1	5427	6060	(119)	4469183
16	17.6	0.0	2.9	chrX	77937876	77937887	(78103008)	+	(CT)n	Simple_repeat	1	12	(0)	4469186
43	2.5	0.0	0.0	chrX	77937888	77937928	(78102967)	+	(CA)n	Simple_repeat	1	41	(0)	4469187
16	17.6	0.0	2.9	chrX	77937929	77937949	(78102946)	+	(CT)n	Simple_repeat	1	21	(0)	4469188
107	11.7	3.7	0.5	chrX	80809684	80809870	(75231025)	+	GA-rich	Low_complexity	1	194	(0)	4472223
13	6.8	5.7	5.4	chrX	101408418	101408452	(54632443)	+	(CCCT)n	Simple_repeat	1	37	(0)	4495991
56	1.9	0.0	0.0	chrX	101948949	101949000	(54091895)	+	(TC)n	Simple_repeat	1	52	(0)	4496686
13924	22.6	3.6	2.0	chrX	102958501	102960936	(53079959)	C	L1PA15	LINE/L1	(4872)	3283	821	4497864
1997	18.5	2.0	1.8	chrX	103050723	103051167	(52989728)	C	L1MCa	LINE/L1	(6005)	503	58	4497975
553	9.5	0.0	0.0	chrX	103051168	103051251	(52989644)	C	HERVFH21-int	LTR/ERV1	(6445)	84	1	4497976
2607	8.6	10.2	6.3	chrX	103051252	103051712	(52989183)	C	LTR21A	LTR/ERV1	(0)	481	1	4497976
788	19.4	7.0	7.0	chrX	103098300	103098543	(52942352)	C	LTR23-int	LTR/ERV1	(3927)	2260	2017	4498052
3110	18.2	3.7	12.3	chrX	103098747	103099552	(52941343)	C	MER50	LTR/ERV1	(0)	734	1	4498056
48	0.0	0.0	0.0	chrX	103243894	103243934	(52796961)	+	(AC)n	Simple_repeat	1	41	(0)	4498338
26	0.0	0.0	0.0	chrX	103243935	103243963	(52796932)	+	(GA)n	Simple_repeat	1	29	(0)	4498339
1910	12.7	2.1	2.5	chrX	103243982	103244299	(52796596)	C	AluSz	SINE/Alu	(0)	312	1	4498340
41	14.9	0.0	1.3	chrX	103708174	103708249	(52332646)	+	GA-rich	Low_complexity	1	76	(0)	4499033
430	18.8	2.4	0.0	chrX	103708280	103708359	(52332536)	+	Tigger15a	DNA/TcMar-Tigger	143	224	(491)	4499034
244	17.6	5.5	0.0	chrX	106693217	106693267	(49347628)	C	L2a	LINE/L2	(2)	3424	3371	4503042
46	0.0	0.0	0.0	chrX	106693362	106693400	(49347495)	+	(AC)n	Simple_repeat	1	39	(0)	4503043
24	5.8	2.6	2.6	chrX	106693401	106693438	(49347457)	+	(GA)n	Simple_repeat	1	39	(0)	4503044
31	3.3	0.0	0.0	chrX	109847682	109847712	(46193183)	+	(TG)n	Simple_repeat	1	31	(0)	4507456
23	20.4	4.7	1.5	chrX	109847721	109847784	(46193111)	+	GA-rich	Low_complexity	1	67	(0)	4507457
4126	9.9	5.8	1.3	chrX	110000728	110001332	(46039563)	C	MER41B	LTR/ERV1	(0)	634	1	4507751
54	8.3	0.0	1.3	chrX	110105658	110105731	(45935164)	+	(AC)n	Simple_repeat	1	74	(0)	4507924
65	0.0	1.6	1.6	chrX	110105732	110105794	(45935101)	+	(AG)n	Simple_repeat	1	64	(0)	4507925
702	33.5	2.8	1.6	chrX	110105825	110106070	(45934825)	+	MIRb	SINE/MIR	10	258	(10)	4507926
1355	20.0	3.6	10.2	chrX	115680270	115680481	(40360414)	+	MLT1A	LTR/ERVL-MaLR	5	215	(159)	4515965
2450	5.3	0.0	0.3	chrX	115680482	115680766	(40360129)	+	AluYc	SINE/Alu	1	284	(15)	4515966
56	0.0	0.0	0.0	chrX	117991847	117991894	(38049001)	+	(CT)n	Simple_repeat	1	48	(0)	4518383
188	26.4	14.9	12.5	chrX	117991908	117992115	(38048780)	+	MamTip2	DNA/hAT-Tip100	91	304	(1)	4518384
696	19.5	11.7	0.0	chrX	118613693	118613820	(37427075)	+	AluJo	SINE/Alu	137	281	(31)	4519574
16	13.7	0.0	0.0	chrX	118613822	118613846	(37427049)	+	(TC)n	Simple_repeat	1	25	(0)	4519575
256	37.8	9.0	1.2	chrX	118613889	118614145	(37426750)	C	L2	LINE/L2	(470)	2949	2671	4519576
80	5.3	2.0	0.0	chrX	119000776	119000873	(37040022)	+	(TC)n	Simple_repeat	1	100	(0)	4520291
18	0.0	0.0	0.0	chrX	120015556	120015575	(36025320)	+	(TG)n	Simple_repeat	1	20	(0)	4522331
67	6.8	2.1	0.0	chrX	120015575	120015667	(36025228)	+	(GA)n	Simple_repeat	1	95	(0)	4522332
28	11.5	2.1	0.0	chrX	120319245	120319271	(35721624)	+	(TC)n	Simple_repeat	1	27	(0)	4522758
74	2.8	0.0	0.0	chrX	120319272	120319343	(35721552)	+	(CA)n	Simple_repeat	1	72	(0)	4522759
28	11.5	2.1	0.0	chrX	120319344	120319363	(35721532)	+	(TC)n	Simple_repeat	2	22	(0)	4522760
2509	7.8	0.3	0.0	chrX	120423382	120423689	(35617206)	C	AluY	SINE/Alu	(0)	311	3	4522905
1127	8.3	0.0	6.4	chrX	120423856	120424012	(35616883)	+	AluSz	SINE/Alu	1	147	(165)	4522906
2301	12.8	0.7	0.0	chrX	120636343	120636647	(35404248)	C	AluSx	SINE/Alu	(0)	312	6	4523315
2033	13.8	4.7	6.4	chrX	120636648	120636946	(35403949)	C	THE1D	LTR/ERVL-MaLR	(74)	307	1	4523314
5955	9.4	1.6	3.5	chrX	120636947	120637291	(35403604)	C	L1PA15	LINE/L1	(811)	5335	4994	4523311
17	11.6	3.5	0.0	chrX	121307723	121307751	(34733144)	+	(TC)n	Simple_repeat	1	30	(0)	4524246
390	31.8	11.1	1.7	chrX	121307771	121307949	(34732946)	+	MIRb	SINE/MIR	58	255	(13)	4524247
49	4.1	0.0	0.0	chrX	123171861	123171911	(32868984)	+	(AC)n	Simple_repeat	1	51	(0)	4526359
28	0.0	0.0	2.9	chrX	123171912	123171941	(32868954)	+	(AG)n	Simple_repeat	2	31	(0)	4526360
890	22.7	3.5	1.9	chrX	123171942	123172181	(32868714)	+	MIR	SINE/MIR	21	249	(13)	4526361
48	0.0	0.0	0.0	chrX	123184095	123184135	(32856760)	+	(TC)n	Simple_repeat	1	41	(0)	4526383
31	35.2	2.4	2.8	chrX	123184217	123184422	(32856473)	+	G-rich	Low_complexity	1	211	(0)	4526384
31	16.8	0.0	0.0	chrX	123780531	123780584	(32260311)	+	(TC)n	Simple_repeat	1	54	(0)	4527317
24	0.0	0.0	0.0	chrX	123780584	123780609	(32260286)	+	(CA)n	Simple_repeat	1	26	(0)	4527318
36	0.0	0.0	0.0	chrX	123780610	123780640	(32260255)	+	(CT)n	Simple_repeat	1	31	(0)	4527319
631	28.8	6.8	6.3	chrX	124006859	124006991	(32033904)	C	L1MC5a	LINE/L1	(1557)	1220	1081	4527912
1255	18.8	2.6	8.9	chrX	124006992	124007315	(32033580)	C	AluJr	SINE/Alu	(8)	304	2	4527919
2118	18.3	7.1	14.3	chrX	124239221	124239767	(31801128)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	4528330
1579	20.1	2.6	2.6	chrX	124977447	124977835	(31063060)	C	L1MB8	LINE/L1	(0)	6178	5790	4529453
4256	27.6	4.0	3.3	chrX	124977848	124977967	(31062928)	C	L1M4a1	LINE/L1	(1096)	1483	1376	4529454
66	0.0	0.0	0.0	chrX	124977968	124978023	(31062872)	+	(GA)n	Simple_repeat	1	56	(0)	4529455
4256	27.6	4.0	3.3	chrX	124978024	124979374	(31061521)	C	L1M4a1	LINE/L1	(1204)	1375	1	4529454
1535	16.5	13.8	4.7	chrX	125250102	125250286	(30790609)	C	MSTA	LTR/ERVL-MaLR	(0)	428	229	4529886
32	0.0	3.2	0.0	chrX	125250287	125250317	(30790578)	+	(GA)n	Simple_repeat	1	32	(0)	4529887
1535	16.5	13.8	4.7	chrX	125250318	125250518	(30790377)	C	MSTA	LTR/ERVL-MaLR	(200)	228	1	4529886
30	18.3	1.6	1.5	chrX	129972847	129972910	(26067985)	+	(AC)n	Simple_repeat	1	65	(0)	4535703
46	0.0	0.0	0.0	chrX	129972911	129972949	(26067946)	+	(AG)n	Simple_repeat	1	39	(0)	4535704
22	20.1	4.2	2.7	chrX	129982405	129982476	(26058419)	+	(CTCC)n	Simple_repeat	1	75	(0)	4535724
27	24.3	0.0	4.8	chrX	130338985	130339068	(25701827)	+	(CTCC)n	Simple_repeat	1	84	(0)	4536392
2062	13.6	1.9	1.0	chrX	130339076	130339384	(25701511)	C	AluSz	SINE/Alu	(0)	312	1	4536393
19	25.4	0.0	3.1	chrX	130340011	130340074	(25700821)	+	(GCCGG)n	Simple_repeat	1	64	(0)	4536394
65	1.7	0.0	0.0	chrX	130617064	130617123	(25423772)	+	(TG)n	Simple_repeat	1	60	(0)	4536832
31	5.3	0.0	0.0	chrX	130617124	130617162	(25423733)	+	(AG)n	Simple_repeat	1	39	(0)	4536833
378	33.0	6.8	9.2	chrX	131326390	131326517	(24714378)	C	L2a	LINE/L2	(233)	3193	3057	4537905
41	2.4	2.3	0.0	chrX	131326590	131326632	(24714263)	+	(GA)n	Simple_repeat	1	44	(0)	4537907
1114	35.5	7.2	1.4	chrX	131326635	131327272	(24713623)	C	L2a	LINE/L2	(469)	2950	2273	4537905
35	0.0	0.0	0.0	chrX	131400837	131400866	(24640029)	+	(CA)n	Simple_repeat	1	30	(0)	4538001
18	0.0	0.0	0.0	chrX	131400867	131400886	(24640009)	+	(GA)n	Simple_repeat	1	20	(0)	4538002
16	14.7	0.0	0.0	chrX	131400972	131401006	(24639889)	+	(GCT)n	Simple_repeat	1	35	(0)	4538003
23	15.5	2.3	0.0	chrX	131987535	131987577	(24053318)	+	(TC)n	Simple_repeat	1	44	(0)	4538747
1903	14.1	15.0	1.1	chrX	132231577	132231942	(23808953)	C	MSTA	LTR/ERVL-MaLR	(0)	428	3	4539106
9993	16.3	1.9	2.4	chrX	132231943	132233912	(23806983)	C	L1MB8	LINE/L1	(889)	5257	3296	4539103
37	2.8	0.0	0.0	chrX	134574056	134574091	(21466804)	+	(TC)n	Simple_repeat	1	36	(0)	4542967
28	20.4	0.0	0.0	chrX	134574092	134574147	(21466748)	+	(AC)n	Simple_repeat	1	56	(0)	4542968
1738	14.4	17.5	1.1	chrX	134671405	134671590	(21369305)	C	MSTA	LTR/ERVL-MaLR	(0)	428	224	4543160
29	0.0	0.0	0.0	chrX	134671591	134671615	(21369280)	+	(GA)n	Simple_repeat	1	25	(0)	4543161
1738	14.4	17.5	1.1	chrX	134671616	134671785	(21369110)	C	MSTA	LTR/ERVL-MaLR	(205)	223	1	4543160
485	35.2	3.0	9.5	chrX	134671786	134671921	(21368974)	+	L3	LINE/CR1	3486	3618	(481)	4543159
33	13.2	0.0	0.0	chrX	134735629	134735679	(21305216)	+	(AG)n	Simple_repeat	1	51	(0)	4543283
273	34.8	17.7	1.1	chrX	134827645	134828007	(21212888)	+	L2c	LINE/L2	2914	3349	(38)	4543443
44	0.0	0.0	0.0	chrX	134828011	134828048	(21212847)	+	(CT)n	Simple_repeat	1	38	(0)	4543444
22	3.9	0.0	0.0	chrX	134828049	134828075	(21212820)	+	(AT)n	Simple_repeat	1	27	(0)	4543445
599	17.8	10.9	0.9	chrX	134828079	134828185	(21212710)	C	AluSz6	SINE/Alu	(193)	119	1	4543446
31	0.0	0.0	0.0	chrX	134968263	134968289	(21072606)	+	(TC)n	Simple_repeat	1	27	(0)	4543749
49	0.0	0.0	0.0	chrX	134968292	134968333	(21072562)	+	(CA)n	Simple_repeat	1	42	(0)	4543750
43	28.5	1.6	0.8	chrX	134986330	134986455	(21054440)	+	(TA)n	Simple_repeat	1	128	(0)	4543776
31	0.0	0.0	0.0	chrX	134986456	134986482	(21054413)	+	(AG)n	Simple_repeat	1	27	(0)	4543777
907	17.0	0.0	2.0	chrX	134986485	134986637	(21054258)	C	AluJr	SINE/Alu	(40)	272	123	4543778
99	10.5	0.7	0.0	chrX	134986640	134986787	(21054108)	+	(TTTC)n	Simple_repeat	1	149	(0)	4543779
2369	14.9	5.1	2.1	chrX	135000063	135000271	(21040624)	+	MSTB1	LTR/ERVL-MaLR	1	220	(212)	4543806
51	0.0	0.0	0.0	chrX	135000272	135000315	(21040580)	+	(TC)n	Simple_repeat	1	44	(0)	4543807
2369	14.9	5.1	2.1	chrX	135000316	135000524	(21040371)	+	MSTB1	LTR/ERVL-MaLR	221	431	(1)	4543806
10325	23.0	4.8	5.2	chrX	135059317	135060073	(20980822)	+	MER66-int	LTR/ERV1	50	795	(5881)	4543895
2270	12.6	10.8	1.8	chrX	135060074	135060462	(20980433)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4543897
93	14.6	0.0	0.0	chrX	136273571	136273721	(19767174)	+	(AG)n	Simple_repeat	1	151	(0)	4545706
187	33.1	13.1	3.6	chrX	136273747	136273884	(19767011)	C	MIRb	SINE/MIR	(112)	156	4	4545707
559	19.1	21.4	19.9	chrX	136964447	136964813	(19076082)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	4546987
187	32.6	9.5	0.0	chrX	139228162	139228247	(16812648)	C	L2b	LINE/L2	(40)	3335	3241	4550393
29	0.0	0.0	0.0	chrX	139228331	139228362	(16812533)	+	(GT)n	Simple_repeat	1	32	(0)	4550399
44	0.0	0.0	0.0	chrX	139228363	139228400	(16812495)	+	(GA)n	Simple_repeat	1	38	(0)	4550400
1085	32.4	7.2	2.6	chrX	139228441	139229113	(16811782)	C	L2b	LINE/L2	(221)	3154	2439	4550393
443	25.3	7.1	4.5	chrX	140761977	140762154	(15278741)	+	MIRc	SINE/MIR	85	267	(1)	4552753
40	0.0	0.0	0.0	chrX	140762210	140762243	(15278652)	+	(AG)n	Simple_repeat	1	34	(0)	4552754
46	2.3	0.0	0.0	chrX	148524081	148524124	(7516771)	+	(CT)n	Simple_repeat	1	44	(0)	4563436
30	0.0	0.0	0.0	chrX	148524125	148524157	(7516738)	+	(GT)n	Simple_repeat	1	33	(0)	4563437
572	28.4	2.7	3.8	chrX	149515416	149515646	(6525249)	C	MIRb	SINE/MIR	(28)	240	15	4564729
21	7.7	0.0	0.0	chrX	149515691	149515718	(6525177)	+	(CT)n	Simple_repeat	1	28	(0)	4564730
50	0.0	0.0	0.0	chrX	149515719	149515761	(6525134)	+	(CA)n	Simple_repeat	1	43	(0)	4564731
18	8.8	2.5	2.4	chrX	149515762	149515772	(6525123)	+	(CTTTCT)n	Simple_repeat	4	15	(0)	4564732
11493	9.4	1.9	2.3	chrX	149827120	149829097	(6211798)	+	HERVIP10FH-int	LTR/ERV1	687	2401	(2701)	4565069
13	7.6	7.1	0.0	chrX	149830570	149830597	(6210298)	+	(AAAAG)n	Simple_repeat	1	30	(0)	4565071
35	0.0	0.0	0.0	chrX	149830732	149830761	(6210134)	+	(GA)n	Simple_repeat	1	30	(0)	4565072
3317	11.7	2.4	0.6	chrX	149830852	149831435	(6209460)	+	HERVIP10FH-int	LTR/ERV1	2041	2633	(2382)	4565073
3024	21.1	2.8	8.6	chrX	149866023	149866747	(6174148)	C	MER54B	LTR/ERVL	(0)	793	112	4565104
48	4.1	0.0	0.0	chrX	150469607	150469656	(5571239)	+	(CT)n	Simple_repeat	1	50	(0)	4565929
27	0.0	0.0	0.0	chrX	150469657	150469686	(5571209)	+	(GT)n	Simple_repeat	1	30	(0)	4565930
26	7.2	4.4	0.0	chrX	150469686	150469735	(5571160)	+	(TCTCT)n	Simple_repeat	1	52	(0)	4565931
15008	13.8	1.8	3.0	chrX	151687260	151689046	(4351849)	+	L1M1	LINE/L1	17	1766	(5799)	4567978
33	3.1	0.0	0.0	chrX	151689047	151689079	(4351816)	+	(AG)n	Simple_repeat	1	33	(0)	4567979
15008	13.8	1.8	3.0	chrX	151689080	151689763	(4351132)	+	L1M1	LINE/L1	1767	2457	(5108)	4567978
264	32.0	6.4	0.0	chrX	151826132	151826234	(4214661)	+	MIR3	SINE/MIR	91	200	(8)	4568172
31	0.0	0.0	0.0	chrX	151826237	151826263	(4214632)	+	(TC)n	Simple_repeat	1	27	(0)	4568173
12	20.5	5.1	0.0	chrX	151826268	151826306	(4214589)	+	(CGCT)n	Simple_repeat	1	41	(0)	4568174
27	8.9	6.2	4.3	chrX	151905282	151905346	(4135549)	+	GA-rich	Low_complexity	1	69	(0)	4568269
943	26.4	10.7	4.9	chrX	151989434	151989803	(4051092)	+	MLT1J-int	LTR/ERVL-MaLR	1	394	(993)	4568379
43	1.8	3.5	1.7	chrX	151989878	151989935	(4050960)	+	(AG)n	Simple_repeat	1	60	(0)	4568380
274	27.5	2.8	0.0	chrX	151990067	151990135	(4050760)	+	MLT1J-int	LTR/ERVL-MaLR	644	714	(673)	4568379
2052	22.0	6.1	0.3	chrX	152124667	152124816	(3916079)	C	L1MC3	LINE/L1	(1203)	4943	4783	4568544
547	27.7	1.2	2.4	chrX	152124820	152124989	(3915906)	+	MLT1A	LTR/ERVL-MaLR	13	180	(194)	4568547
45	10.9	0.0	0.0	chrX	152125003	152125072	(3915823)	+	(TC)n	Simple_repeat	1	70	(0)	4568548
33	14.1	0.0	0.0	chrX	152125073	152125129	(3915766)	+	(CCTC)n	Simple_repeat	1	57	(0)	4568549
593	23.5	7.9	1.3	chrX	152125134	152125324	(3915571)	+	MLT1A	LTR/ERVL-MaLR	187	390	(0)	4568547
1858	14.7	0.3	0.3	chrX	152145904	152146175	(3894720)	C	L1M1	LINE/L1	(5530)	2035	1765	4568575
51	1.9	1.8	1.8	chrX	152146176	152146231	(3894664)	+	(TC)n	Simple_repeat	1	57	(0)	4568576
1858	14.7	0.3	0.3	chrX	152146232	152146244	(3894651)	C	L1M1	LINE/L1	(5801)	1764	1751	4568575
1708	23.4	5.3	1.9	chrX	152146258	152146341	(3894554)	C	L1MC3	LINE/L1	(6434)	433	351	4568572
2210	16.2	8.1	0.2	chrX	152146342	152146742	(3894153)	+	MER57F	LTR/ERV1	1	435	(0)	4568577
50	2.2	0.0	0.0	chrX	152451319	152451365	(3589530)	+	(CT)n	Simple_repeat	1	47	(0)	4568964
16	3.0	11.8	0.0	chrX	152451369	152451430	(3589465)	+	(CCCTC)n	Simple_repeat	1	69	(0)	4568965
911	18.6	22.5	4.1	chrX	152576274	152576443	(3464452)	+	MLT1A1	LTR/ERVL-MaLR	1	171	(237)	4569128
83	2.5	0.0	0.0	chrX	152576444	152576523	(3464372)	+	(TC)n	Simple_repeat	1	80	(0)	4569129
911	18.6	22.5	4.1	chrX	152576524	152576672	(3464223)	+	MLT1A1	LTR/ERVL-MaLR	172	396	(12)	4569128
22	0.0	0.0	0.0	chrX	153270177	153270200	(2770695)	+	(TC)n	Simple_repeat	1	24	(0)	4570042
43	0.0	2.5	0.0	chrX	153270213	153270252	(2770643)	+	(AG)n	Simple_repeat	1	41	(0)	4570043
300	34.9	3.1	3.1	chrX	153296529	153296646	(2744249)	C	MIRc	SINE/MIR	(134)	134	16	4570076
32	4.5	6.4	0.0	chrX	153296647	153296693	(2744202)	+	(TC)n	Simple_repeat	1	50	(0)	4570077
300	34.9	3.1	3.1	chrX	153296694	153296704	(2744191)	C	MIRc	SINE/MIR	(253)	15	6	4570076
35	0.0	0.0	0.0	chrX	153509029	153509058	(2531837)	+	(CT)n	Simple_repeat	1	30	(0)	4570346
53	0.0	0.0	0.0	chrX	153509062	153509106	(2531789)	+	(TG)n	Simple_repeat	1	45	(0)	4570347
1039	17.6	0.0	1.8	chrX	153891946	153892115	(2148780)	C	FRAM	SINE/Alu	(9)	167	1	4570895
1541	23.9	7.7	0.0	chrX	153892128	153892202	(2148693)	+	MLT1F	LTR/ERVL-MaLR	105	186	(362)	4570892
35	0.0	0.0	0.0	chrX	153892203	153892232	(2148663)	+	(TC)n	Simple_repeat	1	30	(0)	4570896
1541	23.9	7.7	0.0	chrX	153892233	153892566	(2148329)	+	MLT1F	LTR/ERVL-MaLR	187	547	(1)	4570892
757	27.3	17.6	6.9	chrX	154099954	154100376	(1940519)	+	L1M4	LINE/L1	3065	3520	(2626)	4571257
31	0.0	0.0	0.0	chrX	154100377	154100403	(1940492)	+	(AG)n	Simple_repeat	1	27	(0)	4571258
757	25.6	14.1	6.3	chrX	154100404	154100785	(1940110)	+	L1M4	LINE/L1	3521	3968	(2178)	4571257
252	23.7	3.8	1.3	chrX	155615860	155615936	(424959)	C	MLT1O	LTR/ERVL-MaLR	(1)	594	516	4573537
73	0.0	4.1	0.0	chrX	155616101	155616173	(424722)	+	(TC)n	Simple_repeat	1	76	(0)	4573538