13	16.7	4.8	2.3	chr1	1000441	1000482	(247955940)	+	G-rich	Low_complexity	1	44	(0)	1255
12	27.7	0.0	2.2	chr1	1000791	1000835	(247955587)	+	(GGCCG)n	Simple_repeat	1	45	(0)	1256
2198	11.0	0.7	1.3	chr1	1016061	1016360	(247940062)	C	AluSx1	SINE/Alu	(14)	298	1	1282
868	22.3	11.8	0.8	chr1	4006674	4006974	(244949448)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	201	4702
222	25.9	2.7	0.9	chr1	4006981	4007278	(244949144)	+	GA-rich	Low_complexity	1	302	(0)	4703
714	31.5	0.0	2.7	chr1	4204778	4205002	(244751420)	C	MIR	SINE/MIR	(0)	262	44	4966
683	24.0	0.6	5.4	chr1	4205029	4205213	(244751209)	+	MLT1E2	LTR/ERVL-MaLR	325	500	(127)	4967
2090	23.2	6.0	0.2	chr1	5462177	5462660	(243493762)	+	MLT1F	LTR/ERVL-MaLR	1	514	(34)	6785
1703	21.7	9.1	0.8	chr1	6115433	6115906	(242840516)	+	MLT1E2	LTR/ERVL-MaLR	111	627	(0)	7683
2647	6.1	0.0	0.0	chr1	6394582	6394892	(242561530)	C	AluY	SINE/Alu	(0)	311	1	8135
2533	26.7	9.8	9.1	chr1	7267949	7269012	(241687410)	+	L1MB7	LINE/L1	43	1081	(5319)	9620
1982	22.7	4.3	6.7	chr1	7269013	7269583	(241686839)	C	MLT1F2	LTR/ERVL-MaLR	(3)	557	1	9621
1907	20.3	5.2	5.6	chr1	9174708	9175275	(239781147)	+	MLT1E1A	LTR/ERVL-MaLR	17	677	(3)	13094
1285	21.9	7.4	1.9	chr1	12057885	12058343	(236898079)	+	MLT1F	LTR/ERVL-MaLR	24	571	(8)	19062
194	15.9	2.5	0.3	chr1	12058346	12058388	(236898034)	C	MIR3	SINE/MIR	(109)	121	78	19063
726	26.6	10.6	0.4	chr1	12058432	12058669	(236897753)	+	MIRb	SINE/MIR	2	266	(2)	19064
1457	23.1	4.0	8.5	chr1	12668213	12668785	(236287637)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	1	20210
1872	20.4	12.8	1.8	chr1	14312609	14313058	(234643364)	+	MLT1F2	LTR/ERVL-MaLR	54	560	(0)	22959
1134	22.3	6.9	5.2	chr1	14816179	14816561	(234139861)	C	MLT1E1A	LTR/ERVL-MaLR	(2)	678	289	23916
18	4.8	0.0	0.0	chr1	15154407	15154428	(233801994)	+	(GT)n	Simple_repeat	1	22	(0)	24656
756	14.3	0.0	0.8	chr1	17905927	17906053	(231050369)	+	MLT1F1	LTR/ERVL-MaLR	334	459	(110)	30487
2420	19.4	8.4	2.2	chr1	19531300	19531832	(229424590)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	33857
2060	14.3	0.0	0.7	chr1	19531844	19532143	(229424279)	C	AluJo	SINE/Alu	(14)	298	1	33858
397	34.1	12.5	1.0	chr1	20279436	20279939	(228676483)	C	L2a	LINE/L2	(257)	3169	2602	35430
13	5.2	0.0	0.0	chr1	20279958	20279977	(228676445)	+	(TTG)n	Simple_repeat	1	20	(0)	35431
921	13.9	9.4	0.0	chr1	21572015	21572158	(227384264)	+	AluJr	SINE/Alu	133	291	(21)	38212
1990	16.8	13.4	0.0	chr1	21572159	21572592	(227383830)	C	MLT1F	LTR/ERVL-MaLR	(41)	507	7	38209
2740	15.9	11.4	1.9	chr1	22224762	22225275	(226731147)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	39668
4007	19.7	4.2	2.5	chr1	22293556	22294440	(226661982)	+	MER21C	LTR/ERVL	1	901	(37)	39841
720	17.7	12.2	2.5	chr1	22294457	22294618	(226661804)	+	MLT1F2	LTR/ERVL-MaLR	319	498	(62)	39840
18	0.0	0.0	6.7	chr1	22294620	22294650	(226661772)	+	(TTAA)n	Simple_repeat	1	28	(0)	39842
2148	12.9	0.3	0.3	chr1	22294651	22294945	(226661477)	C	AluSz	SINE/Alu	(17)	295	1	39843
186	36.8	2.9	0.0	chr1	23825554	23825621	(225130801)	C	L2b	LINE/L2	(24)	3351	3282	43449
1721	9.4	0.7	9.8	chr1	23825628	23825945	(225130477)	+	AluSx1	SINE/Alu	24	312	(0)	43450
201	33.3	7.0	0.8	chr1	24906751	24906871	(224049551)	C	MIRc	SINE/MIR	(20)	248	120	45973
231	29.5	7.4	4.3	chr1	25068775	25068891	(223887531)	+	MIRb	SINE/MIR	56	176	(92)	46306
203	9.4	0.0	0.0	chr1	25068984	25069015	(223887407)	+	L2a	LINE/L2	3030	3061	(314)	46307
2383	22.8	6.2	0.9	chr1	25069064	25069533	(223886889)	C	MLT1F1	LTR/ERVL-MaLR	(5)	564	61	46308
2292	12.5	0.0	0.0	chr1	25069534	25069838	(223886584)	C	AluSx1	SINE/Alu	(7)	305	1	46309
2116	20.2	8.3	4.0	chr1	25949645	25949958	(223006464)	+	MLT1F	LTR/ERVL-MaLR	148	491	(57)	48188
596	21.6	2.2	0.7	chr1	25949973	25950107	(223006315)	C	MER5B	DNA/hAT-Charlie	(0)	178	42	48190
265	33.6	1.9	7.3	chr1	26825371	26825534	(222130888)	+	MLT1E1A	LTR/ERVL-MaLR	287	441	(239)	50245
1090	16.7	7.7	6.3	chr1	26825536	26825739	(222130683)	+	MLT1E1A	LTR/ERVL-MaLR	407	614	(66)	50245
2155	7.8	2.0	0.3	chr1	26825740	26826032	(222130390)	C	AluSc	SINE/Alu	(11)	298	1	50246
2428	6.8	0.0	0.3	chr1	27079164	27079457	(221876965)	+	AluY	SINE/Alu	1	293	(18)	50877
1206	13.3	2.9	4.8	chr1	27079458	27079494	(221876928)	C	AluJr	SINE/Alu	(189)	123	87	50876
1107	21.1	9.6	13.3	chr1	27079495	27079807	(221876615)	+	MLT1F2	LTR/ERVL-MaLR	195	500	(60)	50873
2416	9.6	0.0	0.0	chr1	27079808	27080109	(221876313)	C	AluSc8	SINE/Alu	(8)	303	2	50878
1551	21.8	4.4	8.4	chr1	30126240	30126690	(218829732)	+	MLT1F2	LTR/ERVL-MaLR	129	560	(0)	57898
1977	23.9	5.2	7.0	chr1	30316242	30316812	(218639610)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	58210
240	29.7	8.6	6.3	chr1	30316813	30316936	(218639486)	+	L2c	LINE/L2	3260	3386	(1)	58208
222	26.3	12.8	2.1	chr1	30740187	30740283	(218216139)	C	MIRb	SINE/MIR	(65)	203	95	58950
308	30.2	4.1	0.0	chr1	30740257	30740395	(218216027)	C	L2c	LINE/L2	(223)	3164	3020	58951
16	23.3	0.0	0.0	chr1	30740396	30740430	(218215992)	+	(C)n	Simple_repeat	1	35	(0)	58952
298	21.2	18.9	1.0	chr1	31111566	31111665	(217844757)	+	MIRb	SINE/MIR	135	256	(12)	59837
1620	16.1	0.3	9.7	chr1	31111750	31112090	(217844332)	+	AluJb	SINE/Alu	1	309	(3)	59838
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
31	3.3	0.0	0.0	chr1	37263464	37263494	(211692928)	+	(TC)n	Simple_repeat	1	31	(0)	72376
1714	21.0	2.3	10.7	chr1	37263495	37263901	(211692521)	+	MLT1F2	LTR/ERVL-MaLR	197	560	(0)	72375
594	28.7	1.3	0.6	chr1	37263902	37264059	(211692363)	C	MIRb	SINE/MIR	(108)	160	2	72374
1843	15.6	0.3	0.7	chr1	37335875	37336157	(211620265)	+	AluJb	SINE/Alu	1	282	(30)	72528
30	0.0	0.0	0.0	chr1	37336167	37336192	(211620230)	+	(CA)n	Simple_repeat	1	26	(0)	72529
2344	22.0	2.5	4.4	chr1	37336193	37336715	(211619707)	C	MLT1F2	LTR/ERVL-MaLR	(38)	522	1	72527
818	25.3	8.4	1.4	chr1	37679065	37679268	(211277154)	+	L1ME4b	LINE/L1	477	701	(191)	73222
1849	21.7	9.7	4.4	chr1	37679269	37679692	(211276730)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	100	73223
1101	24.8	8.9	4.8	chr1	38188623	38188999	(210767423)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	287	74231
608	31.6	7.8	0.0	chr1	38189166	38189377	(210767045)	C	MIR	SINE/MIR	(27)	235	6	74232
29	24.8	3.7	1.8	chr1	39671414	39671521	(209284901)	+	(GAGCCCA)n	Simple_repeat	1	112	(0)	77177
492	26.0	2.9	0.4	chr1	39799888	39800055	(209156367)	+	MIR	SINE/MIR	81	261	(7)	77430
394	21.2	13.7	2.2	chr1	39800215	39800349	(209156073)	C	L1MC	LINE/L1	(2909)	3237	3085	77431
3217	17.0	3.7	0.5	chr1	40870212	40870749	(208085673)	+	MLT1F1	LTR/ERVL-MaLR	1	559	(10)	79683
1701	17.7	3.2	4.3	chr1	40870750	40871009	(208085413)	C	MER2	DNA/TcMar-Tigger	(1)	344	87	79684
2040	20.9	11.5	0.4	chr1	41731433	41731913	(207224509)	+	MLT1F	LTR/ERVL-MaLR	4	544	(4)	81331
1606	24.8	5.8	9.8	chr1	42776874	42777088	(206179334)	C	MLT1F2	LTR/ERVL-MaLR	(24)	536	332	83131
1927	13.8	2.6	0.0	chr1	42777089	42777386	(206179036)	C	AluSc	SINE/Alu	(3)	306	1	83132
2948	18.4	1.9	0.9	chr1	44338184	44338719	(204617703)	C	MLT1F	LTR/ERVL-MaLR	(7)	541	1	85840
1578	23.4	12.4	6.6	chr1	44930983	44931480	(204024942)	+	MLT1F2	LTR/ERVL-MaLR	30	560	(0)	87013
494	27.2	1.7	0.8	chr1	44931487	44931623	(204024799)	+	MLT1H	LTR/ERVL-MaLR	421	584	(7)	87011
2204	11.5	0.7	0.3	chr1	45800017	45800320	(203156102)	+	AluSx	SINE/Alu	1	305	(7)	88811
1149	23.6	8.1	13.9	chr1	45800388	45800982	(203155440)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	4	88812
1927	13.8	0.3	5.8	chr1	52150108	52150419	(196806003)	+	7SLRNA	srpRNA	5	299	(21)	100297
41	5.1	3.2	1.5	chr1	52150422	52150484	(196805938)	+	(ATAG)n	Simple_repeat	1	65	(0)	100298
2123	12.9	0.3	1.9	chr1	52150485	52150794	(196805628)	+	AluSx1	SINE/Alu	1	305	(7)	100299
1068	22.6	10.8	6.0	chr1	52878126	52878585	(196077837)	C	MLT1H2	LTR/ERVL-MaLR	(4)	485	1	101987
226	20.0	0.0	0.0	chr1	53220412	53220456	(195735966)	+	L1M1	LINE/L1	1015	1059	(6506)	102673
1430	28.2	1.8	0.0	chr1	58459198	58459576	(190496846)	C	MLT1F1	LTR/ERVL-MaLR	(7)	562	177	112917
677	26.5	1.9	5.1	chr1	58459565	58459695	(190496727)	C	MLT1F1	LTR/ERVL-MaLR	(339)	221	97	112917
1373	22.6	27.7	3.0	chr1	59062761	59063199	(189893223)	C	MLT1F2	LTR/ERVL-MaLR	(3)	557	4	114109
292	35.2	3.9	1.6	chr1	59193361	59193484	(189762938)	C	MIRc	SINE/MIR	(122)	146	20	114405
2426	22.6	7.6	0.9	chr1	59193510	59194036	(189762386)	C	MLT1F1	LTR/ERVL-MaLR	(4)	565	1	114406
1769	21.3	5.0	6.3	chr1	60595462	60595968	(188360454)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	6	116804
1794	25.9	4.3	8.4	chr1	60596028	60596612	(188359810)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	116805
68	18.8	3.5	2.2	chr1	61692432	61692605	(187263817)	+	GA-rich	Low_complexity	1	180	(0)	118606
613	15.0	0.0	0.0	chr1	61692614	61692693	(187263729)	+	AluJo	SINE/Alu	1	80	(232)	118607
2265	11.3	1.0	0.7	chr1	62749387	62749679	(186206743)	C	AluSq	SINE/Alu	(19)	294	1	120761
956	22.7	2.5	14.1	chr1	62749680	62750069	(186206353)	C	MLT1F2	LTR/ERVL-MaLR	(40)	614	165	120760
319	22.9	0.0	1.6	chr1	62750071	62750132	(186206290)	C	MLT1F2	LTR/ERVL-MaLR	(499)	61	1	120760
2029	25.5	3.2	7.8	chr1	62750139	62750703	(186205719)	C	Zaphod	DNA/hAT-Tip100	(3478)	553	16	120759
302	27.9	1.9	4.3	chr1	63398775	63398871	(185557551)	C	L1ME3G	LINE/L1	(815)	109	14	122005
1345	27.1	4.1	10.2	chr1	63398874	63399470	(185556952)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	2	122007
2386	23.6	4.3	1.8	chr1	64368774	64369317	(184587105)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	3	123756
21	20.7	6.9	0.0	chr1	64505523	64505594	(184450828)	+	(CCGCC)n	Simple_repeat	1	77	(0)	124010
30	0.0	0.0	0.0	chr1	64505848	64505876	(184450546)	+	(CGCCC)n	Simple_repeat	1	29	(0)	124011
2218	18.4	10.4	11.6	chr1	65010096	65010672	(183945750)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	124894
1327	20.5	7.5	2.6	chr1	67425859	67426126	(181530296)	+	AluJo	SINE/Alu	13	294	(18)	128817
1875	23.5	10.6	0.2	chr1	67482727	67483217	(181473205)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	128940
1913	19.3	12.6	5.2	chr1	68190323	68190775	(180765647)	+	MLT1F2	LTR/ERVL-MaLR	4	502	(58)	130203
2448	8.6	0.0	0.0	chr1	68190776	68191076	(180765346)	+	AluSp	SINE/Alu	1	301	(12)	130204
2026	22.0	5.9	10.8	chr1	71605967	71606542	(177349880)	+	MLT1F	LTR/ERVL-MaLR	1	546	(2)	135093
2038	22.9	3.6	2.8	chr1	75093558	75094024	(173862398)	+	MLT1F	LTR/ERVL-MaLR	78	548	(0)	139529
12	19.9	0.0	10.9	chr1	75094093	75094156	(173862266)	+	(TTTTTAT)n	Simple_repeat	1	64	(0)	139530
18	12.0	0.0	5.0	chr1	75616022	75616061	(173340361)	+	(CGGCT)n	Simple_repeat	1	40	(0)	140186
23	22.0	3.2	0.0	chr1	75616111	75616185	(173340237)	+	(TGC)n	Simple_repeat	1	77	(0)	140187
15	22.0	0.0	2.3	chr1	75616217	75616291	(173340131)	+	(CCACCCC)n	Simple_repeat	1	73	(0)	140188
1017	26.5	8.9	6.8	chr1	76930877	76931423	(172024999)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	142137
1331	21.2	12.4	10.9	chr1	77882023	77882321	(171074101)	C	MLT1F	LTR/ERVL-MaLR	(24)	524	220	143678
751	17.4	0.8	3.0	chr1	77882322	77882453	(171073969)	+	FLAM_C	SINE/Alu	5	133	(10)	143679
17	18.5	0.0	0.0	chr1	77943225	77943255	(171013167)	+	A-rich	Low_complexity	1	31	(0)	143806
1919	25.6	5.9	0.9	chr1	81591531	81592062	(167364360)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	148662
2770	32.6	7.5	7.6	chr1	81592063	81592115	(167364307)	C	ERV3-16A3_I-int	LTR/ERVL	(4927)	299	249	148661
2435	24.3	8.5	2.5	chr1	86037972	86038516	(162917906)	C	Zaphod	DNA/hAT-Tip100	(3267)	764	190	155074
2330	21.6	5.3	1.1	chr1	86038517	86039041	(162917381)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	155078
1399	23.2	6.8	14.3	chr1	87247028	87247621	(161708801)	+	MLT1F2	LTR/ERVL-MaLR	1	546	(14)	156792
300	30.0	2.6	15.0	chr1	87247669	87247935	(161708487)	C	LTR81C	LTR/Gypsy	(920)	233	1	156793
21	23.3	0.0	0.0	chr1	88683885	88683929	(160272493)	+	A-rich	Low_complexity	1	45	(0)	158815
1796	23.6	8.8	4.8	chr1	89963892	89964347	(158992075)	+	MLT1F	LTR/ERVL-MaLR	1	480	(68)	160627
2374	10.7	0.3	0.0	chr1	89964348	89964657	(158991765)	C	AluSz	SINE/Alu	(0)	312	2	160628
276	29.5	5.2	9.2	chr1	92754250	92754391	(156202031)	C	L2c	LINE/L2	(5)	3382	3247	164990
1978	23.5	8.3	0.0	chr1	92754409	92754884	(156201538)	C	MLT1F	LTR/ERVL-MaLR	(29)	519	1	164991
2207	12.4	0.0	0.0	chr1	92794445	92794743	(156161679)	+	AluSx	SINE/Alu	1	299	(13)	165093
1571	24.9	8.3	4.4	chr1	92794744	92795054	(156161368)	+	MLT1F	LTR/ERVL-MaLR	128	468	(80)	165092
385	16.7	0.0	4.5	chr1	92795048	92795113	(156161309)	+	AluJb	SINE/Alu	228	290	(22)	165094
4238	18.0	3.9	0.6	chr1	92795126	92795559	(156160863)	+	L1MB4	LINE/L1	5326	5784	(396)	165095
1698	24.8	6.3	2.9	chr1	94765394	94765976	(154190446)	+	MLT1F	LTR/ERVL-MaLR	1	571	(8)	168268
2018	25.6	12.7	6.0	chr1	94818824	94819777	(154136645)	C	L1MEh	LINE/L1	(952)	1456	430	168357
2261	24.6	3.6	1.3	chr1	95028989	95029523	(153926899)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	1	168720
293	25.8	12.3	6.6	chr1	101283960	101284096	(147672326)	C	MIR	SINE/MIR	(47)	215	70	177809
316	31.9	4.1	0.8	chr1	107674592	107674708	(141281714)	+	MIR	SINE/MIR	20	140	(122)	185771
1608	24.7	9.7	6.9	chr1	107674709	107675216	(141281206)	+	MLT1F2	LTR/ERVL-MaLR	26	549	(11)	185772
2846	16.3	6.3	1.5	chr1	108824843	108825340	(140131082)	+	MLT1F1	LTR/ERVL-MaLR	42	569	(0)	187384
1295	24.5	11.5	2.2	chr1	114538633	114539069	(134417353)	+	MLT1F	LTR/ERVL-MaLR	58	529	(19)	196791
518	32.2	15.8	3.4	chr1	114539071	114539485	(134416937)	C	HAL1	LINE/L1	(1744)	763	288	196785
631	25.5	11.7	0.0	chr1	117308906	117309101	(131647321)	+	MIRc	SINE/MIR	12	233	(35)	201110
1820	25.0	4.5	6.2	chr1	117651781	117652348	(131304074)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	3	201616
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
2325	21.4	6.6	6.6	chr1	151242640	151243185	(97713237)	C	MLT1F2	LTR/ERVL-MaLR	(14)	546	1	220797
2182	9.7	1.7	0.0	chr1	153671905	153672193	(95284229)	+	AluSx1	SINE/Alu	1	294	(18)	224509
477	27.8	7.0	2.8	chr1	154609975	154610192	(94346230)	+	L1M5	LINE/L1	5292	5519	(723)	226481
1060	24.9	14.2	2.7	chr1	154610249	154610528	(94345894)	+	L1ME3D	LINE/L1	5689	6013	(229)	226482
491	25.1	12.2	3.9	chr1	154834637	154834839	(94121583)	C	MIR	SINE/MIR	(13)	249	28	226863
47	11.4	0.0	2.4	chr1	155226309	155226390	(93730032)	+	(GAAA)n	Simple_repeat	1	82	(0)	227577
785	26.0	5.6	0.8	chr1	155226394	155226649	(93729773)	C	L2	LINE/L2	(414)	3005	2737	227578
222	33.1	5.9	4.5	chr1	155226694	155226826	(93729596)	+	L2c	LINE/L2	3052	3186	(189)	227579
19	11.3	0.0	0.0	chr1	155256517	155256545	(93699877)	+	(CA)n	Simple_repeat	1	29	(0)	227629
662	1.3	0.0	0.0	chr1	161440822	161440896	(87515526)	C	tRNA-Asp-GAY	tRNA	(0)	75	1	237538
489	11.0	0.0	0.0	chr1	161621675	161621747	(87334675)	+	tRNA-Asn-AAC	tRNA	1	73	(4)	237826
749	21.8	0.0	0.0	chr1	163792461	163792602	(85163820)	C	AluJr	SINE/Alu	(2)	310	169	241268
1159	24.2	3.5	9.1	chr1	163792603	163793145	(85163277)	C	MLT1E1A	LTR/ERVL-MaLR	(61)	619	2	241267
1271	27.1	8.1	10.1	chr1	166347221	166347787	(82608635)	+	MLT1F2	LTR/ERVL-MaLR	6	560	(0)	245135
1813	24.9	11.1	0.2	chr1	167182666	167183139	(81773283)	C	MLT1F	LTR/ERVL-MaLR	(1)	547	16	246278
27	17.9	3.7	3.6	chr1	167220781	167220861	(81735561)	+	GA-rich	Low_complexity	1	84	(0)	246371
12	13.9	0.0	0.0	chr1	167220935	167220958	(81735464)	+	(CAG)n	Simple_repeat	1	24	(0)	246372
23	19.6	2.6	5.1	chr1	167221216	167221292	(81735130)	+	(CCG)n	Simple_repeat	1	79	(0)	246373
1712	20.5	9.6	11.6	chr1	167244208	167244699	(81711723)	C	MLT1F2	LTR/ERVL-MaLR	(78)	482	2	246411
919	19.6	0.0	1.7	chr1	168469971	168470146	(80486276)	+	MIR	SINE/MIR	90	262	(0)	248452
5466	18.5	4.0	0.4	chr1	176404882	176405304	(72551118)	C	L1MA1	LINE/L1	(5351)	2214	1768	260137
46	0.0	0.0	0.0	chr1	176405305	176405343	(72551079)	+	(TC)n	Simple_repeat	1	39	(0)	260141
5466	23.2	2.9	4.3	chr1	176405344	176406838	(72549584)	C	L1MA1	LINE/L1	(5798)	1767	20	260137
2618	17.5	7.1	3.7	chr1	178524231	178524771	(70431651)	+	MLT1F1	LTR/ERVL-MaLR	1	561	(8)	263206
1578	22.9	10.9	4.4	chr1	184074227	184074679	(64881743)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	75	272050
2205	19.7	10.7	8.3	chr1	184086413	184086966	(64869456)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	272074
2861	18.5	6.8	0.2	chr1	184652471	184653001	(64303421)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	272989
520	35.8	6.5	0.4	chr1	184653079	184653325	(64303097)	+	MIRb	SINE/MIR	4	266	(2)	272990
521	29.3	9.8	3.4	chr1	186207146	186207382	(62749040)	C	MIR	SINE/MIR	(0)	262	9	275277
26865	3.2	0.3	0.0	chr1	187803948	187808499	(61147923)	C	L1PA3	LINE/L1	(1)	6154	1589	277516
303	18.6	1.4	0.0	chr1	187808511	187808580	(61147842)	+	L1ME2z	LINE/L1	6373	6443	(1)	277517
1293	29.0	4.5	6.7	chr1	187808623	187809173	(61147249)	C	MLT1F2	LTR/ERVL-MaLR	(15)	545	8	277518
391	32.5	2.9	9.1	chr1	198377434	198377474	(50578948)	+	MIR3	SINE/MIR	34	67	(141)	291121
2191	22.5	5.0	7.8	chr1	198377475	198378047	(50578375)	C	MLT1F2	LTR/ERVL-MaLR	(4)	556	1	291122
1064	26.1	9.2	8.5	chr1	200324028	200324549	(48631873)	+	MLT1F2	LTR/ERVL-MaLR	22	560	(0)	294017
245	20.6	8.1	1.4	chr1	200324556	200324624	(48631798)	C	MLT1K	LTR/ERVL-MaLR	(517)	78	5	294016
303	32.3	10.3	9.4	chr1	201453270	201453504	(47502918)	C	L2b	LINE/L2	(2)	3373	3134	296042
2349	20.7	7.0	3.7	chr1	201453505	201453822	(47502600)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	233	296043
2235	11.0	0.0	1.3	chr1	201453823	201454123	(47502299)	+	AluSx3	SINE/Alu	1	297	(14)	296044
2096	10.6	1.4	0.0	chr1	202060506	202060788	(46895634)	C	AluSz	SINE/Alu	(16)	296	10	297164
1429	25.2	8.2	1.5	chr1	202060789	202061117	(46895305)	C	MLT1F	LTR/ERVL-MaLR	(85)	463	105	297162
15	19.9	0.0	0.0	chr1	203627675	203627703	(45328719)	+	A-rich	Low_complexity	1	29	(0)	299985
2279	20.2	8.0	2.9	chr1	203791333	203791842	(45164580)	+	MLT1F	LTR/ERVL-MaLR	3	540	(8)	300326
294	19.4	0.0	2.9	chr1	203791899	203791967	(45164455)	+	Arthur1	DNA/hAT-Tip100	3429	3495	(452)	300327
2218	22.1	5.2	3.8	chr1	204762249	204762804	(44193618)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	6	302210
18	10.5	0.0	0.0	chr1	205774790	205774820	(43181602)	+	(CCTCCC)n	Simple_repeat	1	31	(0)	304076
4100	13.9	5.4	1.1	chr1	210351443	210351539	(38604883)	C	L1MC	LINE/L1	(2203)	3943	3832	311025
758	24.2	15.3	4.7	chr1	210351566	210351925	(38604497)	C	MLT1G1	LTR/ERVL-MaLR	(94)	485	81	311028
241	27.7	7.2	12.2	chr1	211318610	211318757	(37637665)	+	HAL1ME	LINE/L1	4	143	(2322)	312493
595	20.2	6.3	2.0	chr1	211318812	211318980	(37637442)	+	MLT1F2	LTR/ERVL-MaLR	273	490	(137)	312494
255	24.4	11.8	0.0	chr1	211318983	211319072	(37637350)	+	L1ME1	LINE/L1	2608	2709	(3437)	312495
663	12.9	0.0	0.0	chr1	213818491	213818583	(35137839)	+	Tigger1	DNA/TcMar-Tigger	2326	2418	(0)	316797
220	18.8	9.6	0.0	chr1	213818589	213818657	(35137765)	+	MIRc	SINE/MIR	161	247	(15)	316795
421	25.9	3.3	6.4	chr1	218689725	218689799	(30266623)	C	MLT1H1	LTR/ERVL-MaLR	(401)	154	86	323644
1211	26.3	13.1	8.2	chr1	218689800	218690325	(30266097)	C	MLT1F2	LTR/ERVL-MaLR	(4)	556	1	323647
1850	24.6	8.4	0.8	chr1	220500253	220500769	(28455653)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	326320
2851	20.0	4.1	4.1	chr1	222010967	222011345	(26945077)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	199	328507
32	3.2	0.0	0.0	chr1	222011346	222011377	(26945045)	+	(GA)n	Simple_repeat	1	32	(0)	328508
2851	20.0	4.1	4.1	chr1	222011378	222011564	(26944858)	C	MLT1F1	LTR/ERVL-MaLR	(371)	198	3	328507
1586	26.9	5.2	6.3	chr1	224081792	224082529	(24873893)	C	MER21C	LTR/ERVL	(130)	808	16	331751
1006	25.9	6.9	1.5	chr1	224082608	224082723	(24873699)	+	MLT1F2	LTR/ERVL-MaLR	271	393	(167)	331750
5162	13.1	4.0	2.3	chr1	224082724	224083039	(24873383)	+	MER4D1	LTR/ERV1	1	329	(571)	331752
17	23.8	3.6	0.0	chr1	224434953	224435007	(24521415)	+	(CCGACC)n	Simple_repeat	1	57	(0)	332552
1015	25.1	13.5	7.0	chr1	225580154	225580581	(23375841)	+	MLT1F2	LTR/ERVL-MaLR	94	553	(7)	334176
2203	18.1	9.7	4.3	chr1	226903222	226903804	(22052618)	+	MER92B	LTR/ERV1	1	618	(18)	336665
318	16.6	0.0	4.6	chr1	226959973	226960669	(21995753)	+	(GTG)n	Simple_repeat	1	697	(0)	336752
9246	6.1	1.2	9.6	chr1	227275584	227277091	(21679331)	+	SVA_A	Retroposon/SVA	8	1387	(0)	337206
674	25.9	12.1	6.2	chr1	227519066	227519353	(21437069)	C	MLT1F2	LTR/ERVL-MaLR	(29)	531	225	337609
13	27.9	2.9	2.9	chr1	228102203	228102270	(20854152)	+	(CCCGC)n	Simple_repeat	1	70	(0)	338291
41	24.7	5.6	3.4	chr1	229271387	229271584	(19684838)	+	(GGCGCGG)n	Simple_repeat	1	209	(0)	339986
15	10.8	3.3	0.0	chr1	229271623	229271652	(19684770)	+	(TTGCTC)n	Simple_repeat	1	31	(0)	339987
1335	25.9	4.0	4.4	chr1	229948346	229948798	(19007624)	+	MLT1F2	LTR/ERVL-MaLR	110	560	(0)	341174
3776	23.4	6.8	1.8	chr1	229948803	229949912	(19006510)	+	L1M5	LINE/L1	3875	5043	(1103)	341175
904	28.3	5.2	7.7	chr1	230633029	230633479	(18322943)	+	MLT1E1A	LTR/ERVL-MaLR	1	556	(124)	342177
256	27.7	4.9	5.5	chr1	230633555	230633699	(18322723)	C	L2-1_AMi	LINE/L2	(1003)	232	89	342178
675	23.0	4.2	0.0	chr1	231098912	231099072	(17857350)	C	MLT1F	LTR/ERVL-MaLR	(60)	509	342	342915
845	15.6	0.0	2.2	chr1	231099073	231099210	(17857212)	C	MER49	LTR/ERV1	(0)	923	789	342916
1350	17.2	7.0	4.8	chr1	231099234	231099615	(17856807)	C	LTR7B	LTR/ERV1	(2)	470	158	342917
2640	16.5	5.1	0.8	chr1	231194392	231194690	(17761732)	C	LTR44	LTR/ERV1	(7)	512	189	343078
993	27.6	14.3	2.0	chr1	232648238	232648478	(16307944)	C	LTR33A	LTR/ERVL	(4)	516	236	345205
1985	24.4	6.6	1.3	chr1	232648479	232649006	(16307416)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	3	345206
1506	25.4	7.4	4.7	chr1	232740324	232740859	(16215563)	+	MLT1F2	LTR/ERVL-MaLR	1	552	(8)	345361
572	33.5	4.7	1.0	chr1	233717497	233717701	(15238721)	C	MIR	SINE/MIR	(45)	217	5	346810
1067	19.1	6.3	1.9	chr1	233717752	233717964	(15238458)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	338	346811
227	30.6	0.0	1.6	chr1	233717975	233718037	(15238385)	+	MLT1F1	LTR/ERVL-MaLR	248	309	(260)	346812
1074	24.6	1.6	10.4	chr1	233718036	233718389	(15238033)	C	MLT1F2	LTR/ERVL-MaLR	(233)	327	6	346811
1471	24.2	5.4	4.0	chr1	233965343	233965880	(14990542)	+	MLT1E1A	LTR/ERVL-MaLR	34	680	(0)	347173
2079	26.1	6.8	6.1	chr1	234648506	234649061	(14307361)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	348227
471	13.7	0.5	4.2	chr1	234649062	234649127	(14307295)	C	MIRc	SINE/MIR	(99)	169	101	348226
208	28.3	10.2	13.0	chr1	235092969	235093026	(13863396)	+	MIRb	SINE/MIR	178	242	(26)	349013
3270	16.5	7.2	4.2	chr1	235366296	235366990	(13589432)	C	LTR8A	LTR/ERV1	(9)	718	1	349595
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
783	23.5	5.0	0.4	chr1	236624574	236624765	(12331657)	+	MLT1F2-int	LTR/ERVL-MaLR	1155	1489	(0)	351964
1235	26.3	9.8	8.4	chr1	236624784	236625318	(12331104)	+	MLT1F2	LTR/ERVL-MaLR	18	560	(0)	351964
828	33.6	2.9	0.9	chr1	236625336	236625674	(12330748)	+	L1MEj	LINE/L1	312	657	(1503)	351966
312	32.5	3.4	0.0	chr1	238203863	238203976	(10752446)	+	L1MC	LINE/L1	4475	4592	(1554)	354354
1185	27.0	4.9	2.9	chr1	238203986	238204367	(10752055)	C	MLT1E1A	LTR/ERVL-MaLR	(2)	678	289	354355
241	22.9	0.0	0.0	chr1	238204422	238204469	(10751953)	C	MLT1E1A	LTR/ERVL-MaLR	(498)	155	108	354355
1472	24.0	6.2	11.5	chr1	240010232	240010824	(8945598)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	356989
418	33.7	8.6	7.1	chr1	240010849	240011283	(8945139)	+	L2b	LINE/L2	2934	3375	(0)	356990
321	29.8	13.7	3.8	chr1	240589771	240590032	(8366390)	C	L2c	LINE/L2	(151)	3236	2945	357878
13	18.9	0.0	0.0	chr1	243254979	243255008	(5701414)	+	(GCG)n	Simple_repeat	1	30	(0)	362301
18	13.9	0.0	0.0	chr1	243255125	243255157	(5701265)	+	(TCG)n	Simple_repeat	1	33	(0)	362302
2290	10.5	0.0	0.0	chr1	244322011	244322305	(4634117)	+	AluSq2	SINE/Alu	3	297	(16)	363971
933	19.3	9.2	4.9	chr1	244322306	244322569	(4633853)	+	MLT1E1	LTR/ERVL-MaLR	283	606	(48)	363970
1599	22.1	17.3	2.8	chr1	244647360	244647825	(4308597)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	364497
314	21.8	10.3	4.8	chr10	942775	942942	(132854480)	+	MLT1F	LTR/ERVL-MaLR	179	408	(161)	372056
2315	11.8	0.0	0.0	chr10	942943	943246	(132854176)	C	AluSx	SINE/Alu	(8)	304	1	372057
34	0.0	0.0	0.0	chr10	1131684	1131712	(132665710)	+	(GT)n	Simple_repeat	1	29	(0)	372314
460	25.2	6.4	5.9	chr10	1978923	1979141	(131818281)	+	MLT1E	LTR/ERVL-MaLR	385	604	(49)	373145
1013	25.7	5.2	0.7	chr10	3394714	3394987	(130402435)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	274	375034
299	27.6	11.6	6.8	chr10	3438826	3439102	(130358320)	+	L1ME4a	LINE/L1	5620	5789	(335)	375106
1709	24.3	8.3	2.1	chr10	3439103	3439631	(130357791)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	5	375107
1907	19.9	0.6	1.1	chr10	3815853	3816218	(129981204)	+	MLT1A0	LTR/ERVL-MaLR	2	365	(0)	375597
868	29.1	7.1	8.1	chr10	3816219	3816729	(129980693)	C	MLT1H1	LTR/ERVL-MaLR	(28)	527	23	375598
1345	26.3	1.7	0.5	chr10	4582534	4582938	(129214484)	C	L1M5	LINE/L1	(2019)	4127	3718	376668
578	28.7	8.6	9.0	chr10	4582939	4583382	(129214040)	+	MLT1F2	LTR/ERVL-MaLR	1	442	(118)	376670
12	15.8	0.0	3.3	chr10	4583560	4583589	(129213833)	+	(TGCTT)n	Simple_repeat	1	30	(0)	376671
1165	26.9	8.8	3.6	chr10	5468159	5468663	(128328759)	+	MLT1F	LTR/ERVL-MaLR	7	540	(8)	377806
1576	22.8	9.1	9.4	chr10	6388740	6389301	(127408121)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	1	379426
1574	24.6	9.3	5.9	chr10	8247014	8247540	(125549882)	C	MLT1F2	LTR/ERVL-MaLR	(8)	552	6	382418
1478	21.2	9.4	1.4	chr10	8667851	8668219	(125129203)	C	MLT1F	LTR/ERVL-MaLR	(4)	544	143	383149
2002	12.9	4.6	3.3	chr10	8668244	8668611	(125128811)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	383150
13	18.9	2.8	0.0	chr10	12069191	12069226	(121728196)	+	G-rich	Low_complexity	1	37	(0)	388082
17	20.3	2.2	0.0	chr10	12069304	12069348	(121728074)	+	GA-rich	Low_complexity	1	46	(0)	388083
1982	23.4	4.8	6.0	chr10	12890257	12890821	(120906601)	+	MLT1F2	LTR/ERVL-MaLR	1	558	(2)	389765
1602	25.8	7.8	6.0	chr10	14251075	14251623	(119545799)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	392165
291	20.0	3.2	0.0	chr10	14566290	14566349	(119231073)	+	MLT1E1	LTR/ERVL-MaLR	93	154	(406)	392668
834	25.5	2.9	4.6	chr10	14566405	14566684	(119230738)	+	MLT1E1	LTR/ERVL-MaLR	380	654	(0)	392668
2459	9.6	0.0	0.0	chr10	15126147	15126449	(118670973)	+	AluSx	SINE/Alu	1	303	(9)	393670
2130	21.4	3.8	4.3	chr10	15126450	15126882	(118670540)	+	MLT1F2	LTR/ERVL-MaLR	130	560	(0)	393669
305	28.3	15.7	0.7	chr10	15543089	15543234	(118254188)	C	MIR3	SINE/MIR	(5)	203	32	394448
278	11.6	0.0	0.0	chr10	15543447	15543489	(118253933)	+	MLT1F1	LTR/ERVL-MaLR	364	406	(163)	394449
561	20.0	9.7	0.0	chr10	17943163	17943292	(115854130)	+	MLT1F2	LTR/ERVL-MaLR	21	164	(396)	398305
872	23.0	4.6	0.9	chr10	17943299	17943526	(115853896)	+	MLT1F2	LTR/ERVL-MaLR	324	560	(0)	398305
1569	21.4	3.4	7.2	chr10	18696873	18697462	(115099960)	+	MLT1F2	LTR/ERVL-MaLR	1	561	(8)	399512
2076	13.8	1.2	21.4	chr10	21274726	21275056	(112522366)	C	Tigger2a	DNA/TcMar-Tigger	(183)	251	1	403297
1062	28.7	8.3	6.3	chr10	21275057	21275273	(112522149)	+	MLT1F2	LTR/ERVL-MaLR	317	523	(37)	403296
2381	20.5	6.3	2.2	chr10	21372961	21373439	(112423983)	+	MLT1F1	LTR/ERVL-MaLR	1	509	(60)	403538
2296	12.3	0.3	0.0	chr10	21373440	21373748	(112423674)	+	AluSq2	SINE/Alu	1	310	(3)	403539
2092	12.3	1.0	0.0	chr10	21929989	21930273	(111867149)	C	AluSz	SINE/Alu	(23)	289	2	404543
2402	15.6	6.5	0.9	chr10	22517610	22518048	(111279374)	+	L1MB2	LINE/L1	5696	6160	(11)	405396
268	25.4	5.3	0.0	chr10	22518055	22518125	(111279297)	+	L1MC4	LINE/L1	1354	1428	(4787)	405393
1781	25.4	8.1	2.2	chr10	22518177	22518672	(111278750)	C	MLT1F2	LTR/ERVL-MaLR	(18)	542	15	405397
1340	22.5	0.2	1.9	chr10	27782784	27783148	(106014274)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	268	413985
2514	22.5	3.0	7.2	chr10	29424113	29424697	(104372725)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	416864
792	23.5	33.9	0.0	chr10	34760639	34760974	(99036448)	+	MLT1F1	LTR/ERVL-MaLR	105	561	(8)	425229
24	23.8	3.5	2.2	chr10	34815156	34815242	(98982180)	+	(CTCGC)n	Simple_repeat	1	90	(0)	425325
30	5.7	0.0	0.0	chr10	34815493	34815529	(98981893)	+	(CCTC)n	Simple_repeat	1	37	(0)	425326
406	28.5	4.4	0.8	chr10	37858188	37858318	(95939104)	+	MIRb	SINE/MIR	118	253	(15)	430157
1498	24.8	10.5	1.3	chr10	44905391	44905856	(88891566)	C	MLT1F	LTR/ERVL-MaLR	(11)	537	24	435393
3790	16.9	2.9	2.5	chr10	45025179	45025660	(88771762)	+	L1MA5	LINE/L1	5823	6300	(0)	435543
1155	25.8	6.2	14.2	chr10	45025661	45026112	(88771310)	C	MLT1F2	LTR/ERVL-MaLR	(163)	406	1	435542
1240	18.4	13.1	1.0	chr10	46618897	46619192	(87178230)	+	MLT1F1	LTR/ERVL-MaLR	100	436	(133)	437972
1350	19.5	13.1	1.0	chr10	47722474	47722769	(86074653)	C	MLT1F1	LTR/ERVL-MaLR	(133)	436	100	439625
36	0.0	0.0	0.0	chr10	50991311	50991343	(82806079)	+	(GCC)n	Simple_repeat	1	33	(0)	444194
672	32.0	3.0	3.7	chr10	51828454	51828884	(81968538)	+	L1MC5a	LINE/L1	2049	2374	(403)	445438
1786	25.0	8.0	5.3	chr10	51828885	51829428	(81967994)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	445439
1531	26.2	6.5	3.3	chr10	62354301	62354817	(71442605)	C	MLT1F	LTR/ERVL-MaLR	(5)	543	9	459934
14	15.2	0.0	7.1	chr10	63521224	63521265	(70276157)	+	(GCCCTG)n	Simple_repeat	1	42	(0)	461935
13	27.7	1.5	4.5	chr10	63521301	63521323	(70276099)	+	G-rich	Low_complexity	1	66	(0)	461936
918	24.3	13.2	5.8	chr10	63912277	63912763	(69884659)	+	MLT1F1	LTR/ERVL-MaLR	1	481	(88)	462621
1804	24.7	3.4	5.6	chr10	64127755	64128325	(69669097)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	3	462923
20	24.9	1.8	0.0	chr10	67885083	67885139	(65912283)	+	(ACG)n	Simple_repeat	1	58	(0)	468132
1400	20.0	6.0	5.4	chr10	68272527	68272843	(65524579)	C	MLT1E1A	LTR/ERVL-MaLR	(2)	678	360	468827
3828	9.9	5.6	2.5	chr10	68272853	68273095	(65524327)	+	MER4B	LTR/ERV1	1	271	(339)	468828
17	0.0	4.8	0.0	chr10	68595587	68595607	(65201815)	+	(CA)n	Simple_repeat	1	22	(0)	469632
2039	14.4	0.3	0.3	chr10	68595610	68595914	(65201508)	C	AluSg	SINE/Alu	(5)	305	1	469633
895	15.2	0.6	6.8	chr10	70303854	70304030	(63493392)	+	L1MB5	LINE/L1	6003	6168	(6)	473162
14	13.8	0.0	5.6	chr10	71217835	71217870	(62579552)	+	(CCCCCA)n	Simple_repeat	1	36	(0)	474809
1340	22.1	0.0	0.0	chr10	71266743	71267009	(62530413)	+	Tigger7	DNA/TcMar-Tigger	1	267	(2224)	474902
606	25.9	5.4	1.9	chr10	71602338	71602498	(62194924)	C	MIRb	SINE/MIR	(81)	187	21	475585
19	15.9	3.9	1.9	chr10	74825912	74825962	(58971460)	+	G-rich	Low_complexity	1	53	(0)	481942
14	18.2	0.0	0.0	chr10	74826033	74826063	(58971359)	+	(CGCG)n	Simple_repeat	1	31	(0)	481943
33	15.5	0.0	5.1	chr10	75043704	75043782	(58753640)	+	G-rich	Low_complexity	1	79	(0)	482306
1606	24.3	7.0	6.0	chr10	76399916	76400463	(57396959)	+	MLT1F2	LTR/ERVL-MaLR	1	554	(6)	484449
279	28.9	9.3	1.0	chr10	77163986	77164083	(56633339)	+	MIR3	SINE/MIR	93	199	(9)	485452
22	20.9	4.8	5.5	chr10	79242947	79243050	(54554372)	+	G-rich	Low_complexity	1	109	(0)	489320
1539	19.1	8.2	0.7	chr10	87761762	87762043	(46035379)	C	AluJr4	SINE/Alu	(6)	306	2	501789
494	36.4	6.9	3.7	chr10	89650017	89650400	(44147022)	C	L2a	LINE/L2	(488)	2931	2523	504731
2576	21.2	6.6	2.1	chr10	91045569	91046103	(42751319)	C	MLT1F1	LTR/ERVL-MaLR	(8)	561	1	506715
384	27.8	4.2	0.0	chr10	91143705	91143819	(42653603)	+	MLT1E1A	LTR/ERVL-MaLR	1	120	(440)	506875
1374	20.6	8.1	3.1	chr10	91143817	91144167	(42653255)	+	MLT1E1A	LTR/ERVL-MaLR	311	680	(0)	506875
2244	20.0	12.7	0.8	chr10	91580360	91580858	(42216564)	+	MLT1F1	LTR/ERVL-MaLR	1	567	(2)	507515
19	22.7	0.0	0.0	chr10	93471306	93471346	(40326076)	+	(T)n	Simple_repeat	1	41	(0)	511182
657	26.3	4.8	1.5	chr10	93580493	93580693	(40216729)	+	MER103C	DNA/hAT-Charlie	90	297	(0)	511411
398	27.8	8.7	0.0	chr10	93581078	93581192	(40216230)	+	L2a	LINE/L2	3301	3426	(0)	511412
195	30.9	14.3	0.0	chr10	95482759	95482842	(38314580)	C	MIR3	SINE/MIR	(0)	208	111	514346
13	0.0	0.0	0.0	chr10	95483111	95483127	(38314295)	+	(TGG)n	Simple_repeat	1	17	(0)	514347
14	25.4	1.4	6.7	chr10	95561279	95561352	(38236070)	+	G-rich	Low_complexity	1	75	(0)	514500
14	24.7	0.0	0.0	chr10	95561502	95561540	(38235882)	+	G-rich	Low_complexity	1	39	(0)	514501
516	22.7	8.3	0.7	chr10	95561764	95561918	(38235504)	+	MIR	SINE/MIR	94	261	(1)	514502
2429	20.7	8.3	0.0	chr10	97069765	97070286	(36727136)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	517198
315	30.9	1.0	0.0	chr10	97070367	97070463	(36726959)	+	MIR3	SINE/MIR	91	188	(20)	517199
1349	23.0	6.4	3.9	chr10	98377412	98377938	(35419484)	C	MLT1E1	LTR/ERVL-MaLR	(0)	654	1	519811
2103	20.7	11.1	4.8	chr10	100223908	100224086	(33573336)	+	MLT1F1	LTR/ERVL-MaLR	1	199	(370)	522969
29	0.0	0.0	0.0	chr10	100224087	100224111	(33573311)	+	(CT)n	Simple_repeat	1	25	(0)	522970
2103	20.7	11.1	4.8	chr10	100224112	100224434	(33572988)	+	MLT1F1	LTR/ERVL-MaLR	200	539	(30)	522969
2217	10.9	3.2	0.0	chr10	100224435	100224736	(33572686)	C	AluSx1	SINE/Alu	(0)	312	1	522971
596	18.6	1.0	0.0	chr10	100446116	100446212	(33351210)	C	AluJr4	SINE/Alu	(180)	132	35	523388
783	23.3	14.2	3.4	chr10	100446214	100446294	(33351128)	+	L1M5	LINE/L1	3942	4020	(2126)	523386
2568	20.2	6.0	0.6	chr10	100446295	100446812	(33350610)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	1	523389
13	14.2	3.2	0.0	chr10	101354262	101354292	(32443130)	+	(GGCGCT)n	Simple_repeat	1	32	(0)	524954
2406	11.5	0.0	0.0	chr10	101418999	101419310	(32378112)	C	AluSx	SINE/Alu	(0)	312	1	525090
979	28.2	16.6	5.7	chr10	101419313	101419753	(32377669)	C	MLT1F2	LTR/ERVL-MaLR	(70)	490	2	525086
1380	26.6	10.2	3.2	chr10	101419758	101420282	(32377140)	C	L1MC4	LINE/L1	(1019)	7023	6458	525084
758	21.8	8.7	5.6	chr10	102532360	102532592	(31264830)	C	MLT1E1A	LTR/ERVL-MaLR	(2)	678	438	527113
224	29.1	19.9	5.1	chr10	102532770	102533160	(31264262)	C	L2	LINE/L2	(466)	2953	2528	527114
308	27.4	7.9	2.5	chr10	103918661	103918780	(29878642)	+	MamRep4096	DNA/hAT-Tip100	3	129	(297)	529891
1255	25.4	12.0	1.9	chr10	111466444	111466808	(22330614)	+	MLT1F	LTR/ERVL-MaLR	27	433	(115)	541162
625	23.3	6.9	0.0	chr10	111466809	111466971	(22330451)	+	L2a	LINE/L2	3247	3421	(5)	541161
2500	22.6	2.0	6.6	chr10	113365622	113366209	(20431213)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	544195
617	27.4	2.3	8.8	chr10	114472148	114472249	(19325173)	C	MIR	SINE/MIR	(49)	213	119	545989
65	21.4	0.0	0.0	chr10	117542303	117542494	(16254928)	+	GA-rich	Low_complexity	1	192	(0)	550654
2129	20.8	0.9	0.5	chr10	118277825	118278254	(15519168)	+	MLT1F	LTR/ERVL-MaLR	3	434	(114)	551806
281	22.4	4.3	0.0	chr10	118827820	118827886	(14969536)	+	MER96	DNA/hAT-Tip100	106	175	(0)	552681
272	26.1	7.3	5.7	chr10	118828019	118828140	(14969282)	+	MIRc	SINE/MIR	104	227	(41)	552682
359	29.4	13.9	0.6	chr10	119178325	119178492	(14618930)	C	MIRb	SINE/MIR	(20)	248	55	553394
2179	21.7	7.3	0.4	chr10	119388647	119389128	(14408294)	C	MLT1F	LTR/ERVL-MaLR	(30)	518	1	553821
845	20.8	5.4	3.0	chr10	121096631	121096828	(12700594)	C	MER58A	DNA/hAT-Charlie	(3)	221	19	556635
1039	21.3	12.2	8.8	chr10	121096839	121097224	(12700198)	C	MLT1H	LTR/ERVL-MaLR	(60)	489	89	556636
1279	23.3	11.6	7.8	chr10	121153747	121154417	(12643005)	C	MLT1E1A	LTR/ERVL-MaLR	(2)	678	1	556709
1587	26.4	3.6	5.4	chr10	121354808	121355347	(12442075)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	19	557027
1529	23.8	11.1	5.7	chr10	121549476	121549984	(12247438)	+	MLT1F2	LTR/ERVL-MaLR	19	558	(2)	557313
1278	30.0	6.9	2.6	chr10	121618996	121619525	(12177897)	C	MLT1H1	LTR/ERVL-MaLR	(1)	554	1	557417
1935	22.3	9.5	7.4	chr10	124202990	124203532	(9593890)	+	MLT1F2	LTR/ERVL-MaLR	1	556	(4)	561514
505	31.6	2.2	8.8	chr10	124203533	124203590	(9593832)	C	MIRb	SINE/MIR	(199)	69	16	561513
2088	20.3	7.6	6.9	chr10	124278371	124278921	(9518501)	C	MLT1F2	LTR/ERVL-MaLR	(5)	555	1	561618
1472	23.7	14.8	2.1	chr10	125054188	125054657	(8742765)	+	MLT1F2	LTR/ERVL-MaLR	21	560	(0)	562939
246	16.3	9.5	13.1	chr10	125908817	125908915	(7888507)	+	MLT1E1A	LTR/ERVL-MaLR	586	680	(0)	564189
1485	24.1	11.6	0.2	chr10	125908917	125909328	(7888094)	C	MLT1F	LTR/ERVL-MaLR	(83)	465	1	564188
1126	24.8	10.4	9.1	chr10	128402516	128403052	(5394370)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	16	567394
733	24.1	25.0	0.6	chr10	129727103	129727417	(4070005)	+	MLT1F	LTR/ERVL-MaLR	6	398	(171)	568750
437	31.5	7.1	0.5	chr10	132220504	132220688	(1576734)	C	MLT1A1	LTR/ERVL-MaLR	(190)	218	21	571428
277	22.0	0.4	1.6	chr10	132220824	132220895	(1576527)	+	MLT1C	LTR/ERVL-MaLR	486	613	(67)	571427
101	23.0	6.5	5.3	chr10	132364294	132364784	(1432638)	+	(CACTCA)n	Simple_repeat	1	557	(29)	571577
199	20.5	2.5	0.0	chr10	132394677	132394715	(1402707)	C	MamTip2	DNA/hAT-Tip100	(99)	206	167	571604
2034	10.3	3.2	0.0	chr10	132592435	132592706	(1204716)	C	AluSx	SINE/Alu	(31)	281	1	571813
801	26.7	3.7	3.5	chr10	132592783	132593342	(1204080)	C	MLT1E1	LTR/ERVL-MaLR	(9)	671	9	571814
183	28.3	4.8	1.6	chr10	133264529	133264589	(532833)	+	MER5B	DNA/hAT-Charlie	103	165	(13)	572322
240	17.9	1.8	0.0	chr10	133265424	133265479	(531943)	+	L1MC4a	LINE/L1	7825	7881	(1)	572323
668	30.1	9.4	3.9	chr10	133265460	133265509	(531913)	+	L1MC4a	LINE/L1	7109	7158	(724)	572324
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
15	18.2	2.1	4.2	chr11	376174	376220	(134710402)	+	(GGCGG)n	Simple_repeat	1	48	(0)	573341
13	25.2	0.0	2.3	chr11	376270	376313	(134710309)	+	(ATGAGG)n	Simple_repeat	1	44	(0)	573342
305	37.0	1.1	4.7	chr11	521101	521293	(134565329)	C	L1M5	LINE/L1	(542)	5581	5396	573501
1548	19.8	0.4	0.0	chr11	521355	521607	(134565015)	C	AluJb	SINE/Alu	(58)	254	1	573502
20	24.0	2.9	1.4	chr11	706386	706455	(134380167)	+	G-rich	Low_complexity	1	72	(0)	573796
13	28.7	0.0	0.0	chr11	1017643	1017684	(134068938)	+	(TGG)n	Simple_repeat	1	42	(0)	574242
708	25.9	5.0	5.0	chr11	1311733	1311972	(133774650)	+	MLT1E1	LTR/ERVL-MaLR	1	240	(320)	574456
935	23.8	2.7	4.5	chr11	1311949	1312216	(133774406)	+	MLT1E1	LTR/ERVL-MaLR	382	644	(10)	574456
856	25.4	10.3	0.0	chr11	1312217	1312554	(133774068)	+	L1MEg	LINE/L1	1021	1397	(4687)	574457
1077	20.4	10.0	1.9	chr11	1817699	1818007	(133268615)	+	MLT1E1	LTR/ERVL-MaLR	1	346	(308)	575145
872	24.6	5.2	4.7	chr11	1817977	1818251	(133268371)	+	MLT1E1	LTR/ERVL-MaLR	250	624	(0)	575145
1489	21.0	6.8	5.6	chr11	1818628	1819130	(133267492)	+	MLT1E1	LTR/ERVL-MaLR	11	652	(2)	575147
13	8.2	3.9	0.0	chr11	1865281	1865306	(133221316)	+	(GGCAG)n	Simple_repeat	1	27	(0)	575194
11	16.4	2.1	8.2	chr11	2122044	2122091	(132964531)	+	G-rich	Low_complexity	1	49	(0)	575460
2167	20.9	11.2	0.4	chr11	2706092	2706585	(132380037)	+	MLT1F1	LTR/ERVL-MaLR	1	554	(15)	576070
2238	24.3	0.0	11.1	chr11	7232322	7232951	(127853671)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	582410
1552	21.6	8.3	0.3	chr11	13909248	13909690	(121176932)	+	MLT1F	LTR/ERVL-MaLR	1	483	(77)	593019
1676	25.7	3.2	8.9	chr11	17595386	17595978	(117490644)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	3	599018
1570	21.1	7.4	10.0	chr11	19222076	19222645	(115863977)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	8	601822
184	27.6	15.2	2.2	chr11	19390716	19390852	(115695770)	C	L2a	LINE/L2	(217)	3158	3001	602108
361	28.8	2.0	13.8	chr11	19390855	19391144	(115695478)	C	MIRb	SINE/MIR	(9)	259	5	602110
2848	18.0	4.2	0.6	chr11	19496217	19496741	(115589881)	C	MLT1F	LTR/ERVL-MaLR	(3)	545	1	602301
1723	21.1	7.4	5.8	chr11	19833581	19834157	(115252465)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	1	602945
2441	22.9	1.8	4.2	chr11	30355148	30355721	(104730901)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	618336
3187	22.9	8.9	4.3	chr11	30609861	30610737	(104475885)	C	L1ME2	LINE/L1	(29)	6135	5198	618742
1559	16.2	0.3	11.0	chr11	30610738	30611064	(104475558)	C	AluJb	SINE/Alu	(16)	296	5	618743
1456	17.8	0.0	1.6	chr11	31314374	31314624	(103771998)	C	MLT1E1A	LTR/ERVL-MaLR	(2)	678	432	619806
958	18.1	0.5	0.6	chr11	31314666	31314864	(103771758)	C	MLT1E1A	LTR/ERVL-MaLR	(359)	294	90	619806
1545	23.6	13.9	2.7	chr11	31524135	31524622	(103562000)	C	MLT1F2	LTR/ERVL-MaLR	(8)	552	1	620091
1312	22.2	12.5	3.2	chr11	33245958	33246396	(101840226)	C	MLT1F1	LTR/ERVL-MaLR	(7)	572	55	623130
1517	23.8	4.5	6.7	chr11	33534903	33535390	(101551232)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	103	623684
15	16.9	0.0	0.0	chr11	35392104	35392130	(99694492)	+	(TG)n	Simple_repeat	1	27	(0)	626709
18	7.9	3.7	0.0	chr11	35944448	35944474	(99142148)	+	(GT)n	Simple_repeat	1	28	(0)	627610
18	13.4	4.9	0.0	chr11	35944476	35944516	(99142106)	+	GA-rich	Low_complexity	1	43	(0)	627611
1157	28.2	22.0	3.8	chr11	35973767	35974373	(99112249)	C	L1MC4a	LINE/L1	(2278)	5604	4877	627650
1245	23.5	13.7	7.6	chr11	35974382	35974892	(99111730)	C	MLT1F2	LTR/ERVL-MaLR	(11)	549	3	627652
2129	18.9	13.2	0.8	chr11	36250804	36251293	(98835329)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	628122
2947	12.1	2.2	1.0	chr11	36255650	36256242	(98830380)	C	MER4E	LTR/ERV1	(0)	766	1	628134
1426	22.6	16.9	0.2	chr11	36256243	36256654	(98829968)	C	MLT1F	LTR/ERVL-MaLR	(45)	503	9	628133
2346	11.6	3.3	3.3	chr11	36513590	36513953	(98572669)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	628555
1770	17.4	14.0	3.6	chr11	36513954	36514339	(98572283)	+	MLT1F	LTR/ERVL-MaLR	105	546	(2)	628554
250	17.1	0.0	0.0	chr11	36514342	36514382	(98572240)	C	L2a	LINE/L2	(37)	3389	3349	628556
2957	12.8	0.4	0.9	chr11	36514383	36514840	(98571782)	C	MER1A	DNA/hAT-Charlie	(0)	529	74	628557
297	26.9	0.0	0.0	chr11	43999177	43999243	(91087379)	C	MIR	SINE/MIR	(0)	262	196	639359
1484	23.7	12.2	4.1	chr11	43999251	43999743	(91086879)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	22	639360
2307	9.8	1.9	0.0	chr11	44069211	44069516	(91017106)	C	AluSx	SINE/Alu	(0)	312	1	639511
1255	21.8	17.3	13.3	chr11	44069517	44069934	(91016688)	C	MLT1F2	LTR/ERVL-MaLR	(138)	422	1	639510
599	31.5	4.4	4.0	chr11	44703578	44703694	(90382928)	C	MIRb	SINE/MIR	(2)	266	156	640651
2102	22.5	7.0	1.7	chr11	44703695	44704222	(90382400)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	3	640652
1601	24.6	2.5	6.7	chr11	45066558	45067111	(90019511)	C	MLT1E1A	LTR/ERVL-MaLR	(7)	673	25	641431
7282	7.4	1.5	5.8	chr11	45296436	45297589	(89789033)	C	L1MA1	LINE/L1	(6)	6296	5181	641837
517	27.5	11.5	2.3	chr11	45297590	45297885	(89788737)	+	MLT1H1	LTR/ERVL-MaLR	251	550	(29)	641836
734	22.7	11.8	7.6	chr11	45734449	45734827	(89351795)	+	MLT1G3	LTR/ERVL-MaLR	135	506	(42)	642647
310	28.9	1.9	0.0	chr11	45734834	45734935	(89351687)	C	MIR3	SINE/MIR	(54)	176	66	642648
17	7.0	3.3	0.0	chr11	45900083	45900124	(89186498)	+	(CGGCCC)n	Simple_repeat	1	43	(0)	642997
2893	18.2	3.8	1.5	chr11	46862824	46863368	(88223254)	+	MLT1F2	LTR/ERVL-MaLR	3	560	(0)	644794
2003	20.0	6.2	12.1	chr11	57524777	57525373	(77561249)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	653905
1401	24.8	6.2	4.4	chr11	60780073	60780583	(74306039)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	69	658844
13	34.5	0.0	1.5	chr11	64251366	64251432	(70835190)	+	(GCCCCC)n	Simple_repeat	1	67	(0)	665257
1729	19.3	22.5	1.1	chr11	64515975	64516597	(70570025)	C	LTR50	LTR/ERVL	(0)	795	1	665777
15	14.7	0.0	0.0	chr11	65041184	65041213	(70045409)	+	(GCCCC)n	Simple_repeat	1	30	(0)	666738
242	35.2	17.7	0.0	chr11	66051511	66051743	(69034879)	C	L2c	LINE/L2	(5)	3382	3100	668734
3624	9.1	3.8	0.0	chr11	68009397	68009878	(67076744)	C	LTR2C	LTR/ERV1	(0)	501	1	672615
15	6.3	9.1	0.0	chr11	68009951	68009983	(67076639)	+	(ATAAT)n	Simple_repeat	1	36	(0)	672616
1325	15.9	5.6	2.5	chr11	68251577	68251853	(66834769)	+	L1MB4	LINE/L1	5894	6179	(1)	673069
1391	20.8	6.5	6.7	chr11	68251897	68252217	(66834405)	+	MLT1E1A	LTR/ERVL-MaLR	296	625	(55)	673070
2311	10.0	0.0	0.7	chr11	68252218	68252517	(66834105)	C	AluSc8	SINE/Alu	(12)	299	2	673071
858	21.7	8.4	0.8	chr11	68359058	68359299	(66727323)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	308	673269
577	29.1	6.7	10.0	chr11	68963642	68964031	(66122591)	+	MLT1K	LTR/ERVL-MaLR	123	498	(97)	674309
2276	22.1	7.9	1.4	chr11	69281937	69282445	(65804177)	+	MLT1F	LTR/ERVL-MaLR	1	545	(3)	674834
401	30.1	4.6	2.9	chr11	69282452	69282622	(65804000)	+	MIRb	SINE/MIR	58	231	(37)	674835
2191	21.8	10.1	1.8	chr11	69738671	69739171	(65347451)	+	MLT1F	LTR/ERVL-MaLR	2	548	(0)	675614
2220	10.9	0.0	0.0	chr11	69739172	69739455	(65347167)	+	AluSx	SINE/Alu	1	284	(28)	675615
20	28.3	1.2	3.5	chr11	71929056	71929062	(63157560)	+	(GTGGAG)n	Simple_repeat	1	12	(75)	678991
15	22.5	0.0	2.3	chr11	71929063	71929105	(63157517)	+	(TGG)n	Simple_repeat	1	43	(0)	678992
20	28.3	1.2	3.5	chr11	71929106	71929141	(63157481)	+	(GTGGAG)n	Simple_repeat	13	87	(0)	678991
526	26.1	3.2	4.8	chr11	72553785	72553973	(62532649)	C	LTR16A1	LTR/ERVL	(66)	390	205	680179
1242	20.0	11.2	5.3	chr11	72554128	72554564	(62532058)	C	MLT1C	LTR/ERVL-MaLR	(1)	466	1	680180
2129	9.8	3.4	0.0	chr11	73787273	73787558	(61299064)	+	AluSx1	SINE/Alu	1	296	(16)	682675
2486	22.4	10.1	2.5	chr11	74685830	74686456	(60400166)	+	MLT1E1A	LTR/ERVL-MaLR	1	680	(0)	684602
859	26.4	0.8	4.0	chr11	74686457	74686565	(60400057)	+	MIR	SINE/MIR	156	260	(2)	684601
1401	26.6	4.5	6.2	chr11	76888416	76888912	(58197710)	C	MLT1F2	LTR/ERVL-MaLR	(58)	502	15	688878
318	29.2	4.5	1.9	chr11	78187882	78187989	(56898633)	+	MIRb	SINE/MIR	88	198	(70)	691564
1238	28.6	4.7	0.6	chr11	85916465	85916830	(49169792)	C	MLT1F	LTR/ERVL-MaLR	(6)	542	161	704621
2068	14.7	1.3	0.0	chr11	85916837	85917135	(49169487)	+	AluSx	SINE/Alu	9	311	(1)	704622
1332	23.5	2.6	14.4	chr11	94326864	94327490	(40759132)	C	MLT1F1	LTR/ERVL-MaLR	(18)	551	1	716983
857	28.6	7.3	4.5	chr11	95646192	95646594	(39440028)	+	MamRep605	LTR?	72	487	(362)	718949
867	18.1	8.2	8.5	chr11	103563983	103564044	(31522578)	+	L1M4	LINE/L1	3779	3831	(2315)	729626
975	28.2	7.5	5.7	chr11	103564047	103564447	(31522175)	C	MLT1E1A	LTR/ERVL-MaLR	(11)	669	189	729628
2007	12.7	3.7	2.4	chr11	103564448	103564738	(31521884)	C	AluSx1	SINE/Alu	(17)	295	1	729629
1011	27.9	10.5	4.1	chr11	107487159	107488298	(27598324)	+	L1ME4b	LINE/L1	23	480	(412)	734959
2219	20.4	6.1	7.2	chr11	107488300	107488865	(27597757)	C	MLT1F2	LTR/ERVL-MaLR	(1)	559	1	734964
712	25.4	3.0	5.0	chr11	112321232	112321471	(22765151)	C	MIRb	SINE/MIR	(0)	268	34	742952
260	22.7	4.3	0.0	chr11	112321664	112321729	(22764893)	+	CR1-3_Croc	LINE/CR1	3537	3605	(0)	742953
436	27.7	0.0	0.0	chr11	114191871	114191964	(20894658)	C	L2a	LINE/L2	(564)	2855	2762	745868
677	28.8	11.9	4.5	chr11	114191965	114192458	(20894164)	C	MLT1H	LTR/ERVL-MaLR	(13)	536	1	745878
427	31.2	8.0	0.0	chr11	114397988	114398160	(20688462)	C	L3	LINE/CR1	(37)	4062	3875	746208
660	19.4	12.5	3.3	chr11	114398205	114398385	(20688237)	+	MER105	DNA/hAT-Charlie	4	203	(0)	746209
2187	23.8	3.8	2.5	chr11	114951063	114951610	(20135012)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	6	746951
1947	23.3	6.0	2.9	chr11	115782196	115782707	(19303915)	+	MLT1E1A	LTR/ERVL-MaLR	151	679	(1)	748231
2339	21.7	4.9	6.4	chr11	116645615	116646191	(18440431)	+	MLT1F1	LTR/ERVL-MaLR	1	568	(1)	749692
320	29.6	10.0	5.6	chr11	116812876	116813018	(18273604)	+	L3	LINE/CR1	3832	3981	(118)	749993
199	23.6	12.7	0.0	chr11	116813030	116813084	(18273538)	C	L2a	LINE/L2	(0)	3426	3364	749994
1900	19.0	10.8	1.0	chr11	116813086	116813500	(18273122)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	88	749995
13	22.8	2.4	0.0	chr11	117876748	117876788	(17209834)	+	G-rich	Low_complexity	1	42	(0)	751891
16	17.9	8.8	4.0	chr11	117876847	117876914	(17209708)	+	(CT)n	Simple_repeat	1	74	(0)	751892
2826	21.9	2.3	1.3	chr11	119813833	119814386	(15272236)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	755521
1271	22.3	12.8	4.6	chr11	120037023	120037514	(15049108)	+	MLT1F	LTR/ERVL-MaLR	1	529	(19)	755884
648	18.2	3.1	1.6	chr11	120037517	120037643	(15048979)	+	MLT1A	LTR/ERVL-MaLR	2	130	(244)	755885
1930	20.4	16.3	1.9	chr11	123115794	123116264	(11970358)	C	MLT1F2	LTR/ERVL-MaLR	(8)	552	1	760878
492	22.0	4.2	13.9	chr11	123143373	123143671	(11942951)	+	MLT1E1	LTR/ERVL-MaLR	105	454	(173)	760943
934	21.4	2.9	7.0	chr11	123143695	123143812	(11942810)	+	MLT1E1	LTR/ERVL-MaLR	431	537	(143)	760943
2050	14.7	0.0	1.7	chr11	123143813	123144112	(11942510)	C	AluSz	SINE/Alu	(16)	296	2	760944
3239	18.8	5.6	2.4	chr11	124820988	124821641	(10264981)	C	LTR8A	LTR/ERV1	(43)	684	1	763608
12	10.6	2.9	5.7	chr11	125626315	125626348	(9460274)	+	(TGGAAT)n	Simple_repeat	1	35	(0)	764863
2958	20.3	6.6	2.7	chr11	129143290	129143992	(5942630)	+	MER44C	DNA/TcMar-Tigger	2	733	(0)	769889
1877	18.4	0.0	0.0	chr11	130096436	130096734	(4989888)	+	AluJr4	SINE/Alu	1	299	(13)	771360
1446	24.6	7.8	7.5	chr11	130617991	130618540	(4468082)	+	MLT1F2	LTR/ERVL-MaLR	7	558	(2)	772171
34	8.0	1.8	1.8	chr11	133083111	133083165	(2003457)	+	(CA)n	Simple_repeat	1	56	(0)	775453
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
12	33.2	0.0	1.7	chr12	8698023	8698080	(124577229)	+	G-rich	Low_complexity	1	58	(0)	792747
13	20.7	5.8	1.8	chr12	8698397	8698448	(124576861)	+	G-rich	Low_complexity	1	55	(0)	792748
193	31.8	13.7	3.3	chr12	9331491	9331939	(123943370)	C	L2a	LINE/L2	(0)	3426	2924	793698
916	23.9	7.9	7.9	chr12	9331978	9332282	(123943027)	C	MLT1F2	LTR/ERVL-MaLR	(31)	529	225	793699
39	2.7	0.0	0.0	chr12	9332309	9332346	(123942963)	+	(GA)n	Simple_repeat	1	38	(0)	793700
849	28.7	18.1	2.8	chr12	10562936	10563404	(122711905)	+	MLT1F2	LTR/ERVL-MaLR	1	557	(3)	795357
1880	20.1	9.8	4.9	chr12	12653725	12654215	(120621094)	+	MLT1F2	LTR/ERVL-MaLR	1	518	(42)	798514
983	16.8	0.0	6.6	chr12	12654236	12654432	(120620877)	+	AluJb	SINE/Alu	118	301	(11)	798515
2725	9.0	0.0	0.0	chr12	13231923	13232277	(120043032)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	799566
2350	20.4	7.8	1.2	chr12	13232278	13232587	(120042722)	+	MLT1F	LTR/ERVL-MaLR	228	548	(0)	799565
280	29.2	8.6	0.0	chr12	14264245	14264340	(119010969)	+	MLT1L	LTR/ERVL-MaLR	97	201	(409)	801057
2507	20.0	3.3	0.7	chr12	14264417	14264916	(119010393)	C	MLT1F1	LTR/ERVL-MaLR	(58)	533	1	801058
608	25.4	7.0	3.0	chr12	14264917	14265147	(119010162)	+	MLT1L	LTR/ERVL-MaLR	343	583	(27)	801057
2251	22.2	3.5	1.3	chr12	14917424	14917953	(118357356)	+	MLT1F	LTR/ERVL-MaLR	7	548	(0)	802098
21	13.4	0.0	2.3	chr12	15911703	15911745	(117363564)	+	A-rich	Low_complexity	1	43	(0)	803495
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
205	26.6	3.0	3.0	chr12	19075102	19075167	(114200142)	C	L3	LINE/CR1	(3256)	843	778	807474
913	26.6	10.5	3.9	chr12	19075210	19075651	(114199658)	C	MLT1H	LTR/ERVL-MaLR	(1)	548	74	807475
650	22.5	10.7	9.1	chr12	24909700	24910091	(108365218)	+	MLT1F	LTR/ERVL-MaLR	138	519	(60)	815620
202	38.0	2.9	1.0	chr12	27193960	27194060	(106081249)	+	MamTip2	DNA/hAT-Tip100	1	103	(202)	819148
1467	22.9	8.3	7.5	chr12	29876751	29877297	(103398012)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	9	822968
2131	21.9	6.2	0.2	chr12	32973350	32973862	(100301447)	+	MLT1F	LTR/ERVL-MaLR	1	546	(2)	828456
2419	20.1	8.8	2.9	chr12	38686501	38687023	(94588286)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	13	831431
2191	22.9	8.3	2.5	chr12	41076983	41077501	(92197808)	+	MLT1F1	LTR/ERVL-MaLR	13	564	(5)	834583
1714	24.3	9.3	6.5	chr12	41171578	41172119	(92103190)	C	MLT1F2	LTR/ERVL-MaLR	(1)	559	1	834713
34	0.0	0.0	0.0	chr12	42484012	42484048	(90791261)	+	(A)n	Simple_repeat	1	37	(0)	836701
14	18.5	4.8	6.2	chr12	43835973	43836034	(89439275)	+	(GCG)n	Simple_repeat	1	65	(0)	838634
2070	12.8	1.0	0.7	chr12	45991281	45991576	(87283733)	+	AluSz	SINE/Alu	1	297	(15)	841695
2546	19.0	5.3	0.2	chr12	46380019	46380536	(86894773)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	1	842177
392	25.6	7.2	0.0	chr12	47278476	47278604	(85996705)	C	L1ME3G	LINE/L1	(0)	924	786	843422
827	11.1	0.0	0.0	chr12	49776596	49776703	(83498606)	C	AluSz	SINE/Alu	(204)	108	1	847785
1971	16.4	0.7	0.7	chr12	50084385	50084694	(83190615)	+	AluSz	SINE/Alu	1	310	(2)	848382
396	37.0	4.0	1.6	chr12	50084770	50085011	(83190298)	+	MIRc	SINE/MIR	18	265	(3)	848383
14	24.9	0.0	0.0	chr12	50085032	50085070	(83190239)	+	G-rich	Low_complexity	1	39	(0)	848384
2046	23.8	4.0	3.5	chr12	50840810	50841358	(82433951)	C	MLT1F2	LTR/ERVL-MaLR	(8)	552	1	850113
24	0.0	0.0	0.0	chr12	50924530	50924555	(82350754)	+	(A)n	Simple_repeat	1	26	(0)	850242
2362	8.9	0.3	0.6	chr12	54214076	54214388	(79060921)	C	AluSz6	SINE/Alu	(0)	312	1	856061
258	30.9	9.0	9.3	chr12	54214389	54214576	(79060733)	C	L2c	LINE/L2	(602)	2817	2625	856059
1653	23.7	12.7	8.3	chr12	64832561	64833093	(68442216)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	871873
2213	26.7	12.6	2.5	chr12	66102249	66103306	(67172003)	C	L2a	LINE/L2	(133)	3293	2112	873811
2073	24.5	1.6	6.9	chr12	67862384	67862965	(65412344)	+	MLT1F2	LTR/ERVL-MaLR	10	560	(0)	876524
1315	10.1	0.0	0.0	chr12	68533660	68533827	(64741482)	C	AluYc	SINE/Alu	(7)	292	125	877565
1333	22.0	0.0	1.9	chr12	68533829	68534088	(64741221)	+	MLT1F	LTR/ERVL-MaLR	197	451	(97)	877564
13	16.7	4.8	2.3	chr12	69470606	69470647	(63804662)	+	(GCTCCGG)n	Simple_repeat	1	44	(0)	879354
804	17.4	5.6	1.3	chr12	70522281	70522503	(62752806)	+	MLT1F1	LTR/ERVL-MaLR	303	560	(0)	881009
1179	23.0	8.2	2.1	chr12	71103878	71104208	(62171101)	+	L1ME3A	LINE/L1	5766	6118	(55)	881869
2567	21.4	3.3	2.0	chr12	71104209	71104769	(62170540)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	881870
350	27.7	15.7	2.2	chr12	71744887	71745067	(61530242)	C	L2a	LINE/L2	(19)	3407	3198	882790
13	16.2	5.4	6.8	chr12	76764091	76764146	(56511163)	+	GA-rich	Low_complexity	1	59	(0)	889813
17	14.2	8.9	1.6	chr12	76764146	76764201	(56511108)	+	(GCTCGC)n	Simple_repeat	1	61	(0)	889814
3197	16.7	2.3	1.4	chr12	77617505	77618098	(55657211)	C	LTR26	LTR/ERV1	(3)	600	1	891071
2018	25.4	5.3	0.9	chr12	77618099	77618343	(55656966)	+	MLT1F	LTR/ERVL-MaLR	284	548	(0)	891070
2732	19.2	3.0	3.1	chr12	78227670	78228212	(55047097)	+	MLT1F1	LTR/ERVL-MaLR	1	542	(27)	891862
867	21.2	4.7	0.5	chr12	78228286	78228470	(55046839)	C	MER3	DNA/hAT-Charlie	(2)	207	15	891863
1147	22.9	9.8	0.5	chr12	79597371	79597778	(53677531)	C	Charlie10	DNA/hAT-Charlie	(8)	2814	2365	893716
1574	24.9	11.5	0.4	chr12	79597797	79598259	(53677050)	C	MLT1F	LTR/ERVL-MaLR	(27)	521	1	893717
987	27.9	4.4	7.7	chr12	81031561	81031915	(52243394)	+	MLT1F2	LTR/ERVL-MaLR	178	600	(80)	895872
1166	26.3	9.9	4.0	chr12	81031940	81032383	(52242926)	+	L1ME4b	LINE/L1	413	885	(7)	895871
1949	19.2	15.0	3.5	chr12	93239478	93239837	(40035472)	+	MLT1F	LTR/ERVL-MaLR	3	429	(119)	913010
2730	11.9	0.6	0.3	chr12	93239838	93240200	(40035109)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	913011
2379	22.7	4.9	1.5	chr12	94027514	94028046	(39247263)	+	MLT1F2	LTR/ERVL-MaLR	1	552	(8)	914525
961	23.3	13.3	7.4	chr12	94049619	94049893	(39225416)	C	MLT1E1A	LTR/ERVL-MaLR	(53)	627	320	914572
677	15.6	3.6	4.3	chr12	94049917	94050057	(39225252)	C	MLT1E1A	LTR/ERVL-MaLR	(540)	140	1	914572
2382	20.3	9.5	1.0	chr12	94773884	94774400	(38500909)	C	MLT1F1	LTR/ERVL-MaLR	(2)	567	2	915809
13	4.9	0.0	4.3	chr12	96399430	96399452	(36875857)	+	(CTC)n	Simple_repeat	1	23	(0)	918976
15	23.2	0.0	8.4	chr12	96399871	96399941	(36875368)	+	(GCCCCC)n	Simple_repeat	1	71	(0)	918977
1758	24.2	12.6	3.0	chr12	96972524	96973124	(36302185)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	14	919961
327	33.6	7.9	3.8	chr12	97056795	97057060	(36218249)	+	L2	LINE/L2	2260	2537	(882)	920080
1835	22.4	10.3	2.0	chr12	97057084	97057588	(36217721)	+	MLT1F2	LTR/ERVL-MaLR	9	560	(0)	920081
377	39.0	8.6	2.2	chr12	97057595	97057964	(36217345)	+	L2	LINE/L2	2607	3002	(417)	920080
2769	18.6	5.7	0.0	chr12	98469082	98469598	(34805711)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	922278
319	32.1	5.2	0.0	chr12	101241053	101241161	(32034148)	+	MamTip3	DNA/hAT-Tip100	181	295	(205)	926865
2080	22.3	5.3	7.2	chr12	101241180	101241750	(32033559)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	926866
1209	23.9	12.2	9.7	chr12	101959689	101960215	(31315094)	C	MLT1G1	LTR/ERVL-MaLR	(8)	571	1	928351
1776	15.5	15.3	1.9	chr12	104553607	104553790	(28721519)	C	MSTA	LTR/ERVL-MaLR	(203)	225	1	932821
1095	23.4	6.7	3.0	chr12	104553791	104554272	(28721037)	C	MLT1F2	LTR/ERVL-MaLR	(17)	543	1	932820
1316	31.4	6.0	2.4	chr12	105458105	105458614	(27816695)	+	L2a	LINE/L2	2464	2995	(424)	934414
2002	22.2	5.9	10.3	chr12	105458615	105459186	(27816123)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	4	934415
819	26.9	12.2	6.6	chr12	108329940	108330453	(24944856)	+	MLT1H	LTR/ERVL-MaLR	3	549	(0)	940035
705	26.7	3.4	3.4	chr12	108373630	108373829	(24901480)	C	L2a	LINE/L2	(322)	3104	2898	940148
1666	21.4	8.9	11.9	chr12	108373830	108374408	(24900901)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	940149
2180	20.6	9.2	1.4	chr12	108508759	108509251	(24766058)	+	MLT1F	LTR/ERVL-MaLR	7	541	(7)	940448
2049	15.2	0.0	0.7	chr12	108868089	108868398	(24406911)	C	AluSz6	SINE/Alu	(4)	308	1	941160
2692	19.8	1.5	4.8	chr12	108868399	108868594	(24406715)	+	MLT1F	LTR/ERVL-MaLR	355	542	(6)	941159
1971	21.5	10.7	7.8	chr12	108919807	108920342	(24354967)	+	MLT1F2	LTR/ERVL-MaLR	4	556	(4)	941298
461	27.1	2.1	4.1	chr12	108920377	108920522	(24354787)	+	MIRc	SINE/MIR	28	170	(98)	941299
283	29.7	1.9	1.0	chr12	109040311	109040412	(24234897)	C	MER5A1	DNA/hAT-Charlie	(60)	106	4	941609
2432	19.5	8.2	1.4	chr12	109040423	109040932	(24234377)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	1	941610
282	35.1	13.2	0.7	chr12	109763181	109763301	(23512008)	+	MIRb	SINE/MIR	18	153	(115)	943235
2390	20.2	5.9	3.8	chr12	109763302	109763835	(23511474)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	3	943236
253	35.0	13.3	0.7	chr12	109763836	109763857	(23511452)	+	MIRc	SINE/MIR	152	175	(93)	943235
195	27.2	5.8	1.2	chr12	109763850	109763931	(23511378)	+	MIRb	SINE/MIR	127	212	(56)	943237
1748	22.8	7.0	6.1	chr12	110800742	110801282	(22474027)	+	MLT1F2	LTR/ERVL-MaLR	15	560	(0)	945575
2207	14.2	0.0	0.0	chr12	110801316	110801624	(22473685)	+	AluSx1	SINE/Alu	1	309	(3)	945576
520	26.2	9.6	1.4	chr12	111223373	111223636	(22051673)	+	MLT1H1	LTR/ERVL-MaLR	19	264	(291)	946539
294	11.5	3.7	0.0	chr12	111223717	111223768	(22051541)	+	MLT1H1	LTR/ERVL-MaLR	365	418	(151)	946539
327	27.7	12.7	7.4	chr12	111223772	111223919	(22051390)	+	L2b	LINE/L2	3011	3167	(208)	946540
531	18.3	0.0	0.0	chr12	111399246	111399327	(21875982)	+	FAM	SINE/Alu	98	179	(6)	947011
1696	19.9	2.5	5.3	chr12	111399331	111399646	(21875663)	C	MLT1F1	LTR/ERVL-MaLR	(164)	405	102	947010
2211	17.1	9.4	2.9	chr12	113540514	113541007	(19734302)	C	MLT1F	LTR/ERVL-MaLR	(0)	654	11	951839
1919	20.6	11.0	5.3	chr12	113653554	113654065	(19621244)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	14	952141
519	32.1	6.5	0.9	chr12	114436675	114436891	(18838418)	+	MIRb	SINE/MIR	36	265	(3)	953705
51	0.0	0.0	0.0	chr12	114437174	114437217	(18838092)	+	(AC)n	Simple_repeat	1	44	(0)	953706
906	27.6	7.6	3.2	chr12	114437218	114437654	(18837655)	C	L1ME4b	LINE/L1	(227)	665	208	953707
13	15.7	8.1	4.5	chr12	114684550	114684611	(18590698)	+	(GAGGCAG)n	Simple_repeat	1	67	(0)	954268
1523	13.1	0.0	10.1	chr12	114709398	114709703	(18565606)	+	AluSz6	SINE/Alu	2	276	(36)	954314
2514	20.7	4.6	3.1	chr12	114918006	114918544	(18356765)	+	MLT1F	LTR/ERVL-MaLR	1	547	(1)	954882
16	14.9	4.2	4.0	chr12	114918565	114918612	(18356697)	+	(TGAA)n	Simple_repeat	1	50	(0)	954883
2489	19.0	8.1	1.0	chr12	114939986	114940491	(18334818)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	4	954927
2250	23.0	1.5	5.1	chr12	114995902	114996378	(18278931)	+	MLT1F	LTR/ERVL-MaLR	77	548	(0)	955047
312	26.0	3.6	8.8	chr12	115341956	115342167	(17933142)	C	MIR	SINE/MIR	(1)	261	62	955807
836	22.9	10.0	3.4	chr12	115342247	115342513	(17932796)	C	MLT1F	LTR/ERVL-MaLR	(68)	585	237	955808
22	19.4	0.0	3.5	chr12	115342521	115342578	(17932731)	+	GA-rich	Low_complexity	1	58	(0)	955809
3041	9.0	6.6	0.9	chr12	115396116	115396542	(17878767)	C	L1PA10	LINE/L1	(0)	6168	5716	955924
462	31.8	14.9	3.6	chr12	115396543	115396755	(17878554)	+	L2c	LINE/L2	2854	3086	(301)	955923
1996	23.0	6.8	8.7	chr12	115396756	115397327	(17877982)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	955925
936	21.8	5.2	1.0	chr12	115517064	115517267	(17758042)	C	MLT1F	LTR/ERVL-MaLR	(38)	510	298	956190
2018	24.3	4.0	2.9	chr12	115517329	115517841	(17757468)	+	MLT1F	LTR/ERVL-MaLR	3	521	(27)	956191
1510	24.6	7.8	7.3	chr12	115537584	115538132	(17737177)	+	MLT1F2	LTR/ERVL-MaLR	1	552	(8)	956235
1071	26.1	8.1	6.4	chr12	115624760	115625197	(17650112)	+	MLT1J2	LTR/ERVL-MaLR	1	446	(2)	956425
1511	19.1	10.5	0.7	chr12	115625273	115625582	(17649727)	+	MLT1F	LTR/ERVL-MaLR	205	548	(0)	956426
827	29.3	10.0	1.3	chr12	115625584	115625901	(17649408)	C	LTR16C	LTR/ERVL	(140)	349	1	956427
330	28.2	0.0	17.3	chr12	115824829	115824939	(17450370)	C	MER5B	DNA/hAT-Charlie	(63)	115	31	956855
1560	24.4	9.5	7.0	chr12	115824940	115825481	(17449828)	C	MLT1F2	LTR/ERVL-MaLR	(3)	557	1	956857
1594	25.5	6.2	6.2	chr12	115877105	115877664	(17397645)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	956976
7275	17.8	4.8	3.6	chr12	116397720	116399334	(16875975)	C	L1MB7	LINE/L1	(5006)	2511	847	957929
17	11.3	0.0	0.0	chr12	116399401	116399429	(16875880)	+	(AAAT)n	Simple_repeat	1	29	(0)	957934
787	24.7	1.6	1.1	chr12	116399514	116399697	(16875612)	+	MLT1E1A	LTR/ERVL-MaLR	494	678	(2)	957935
916	27.0	14.2	2.5	chr12	116487823	116488200	(16787109)	+	MLT1L	LTR/ERVL-MaLR	135	554	(56)	958186
2510	17.5	8.4	0.6	chr12	116488200	116488681	(16786628)	C	MLT1F1	LTR/ERVL-MaLR	(6)	563	41	958189
18	7.2	3.3	0.0	chr12	116534059	116534088	(16741221)	+	(CTC)n	Simple_repeat	1	31	(0)	958310
2135	23.0	5.6	3.8	chr12	116584809	116585332	(16689977)	+	MLT1F	LTR/ERVL-MaLR	7	540	(8)	958446
1279	17.0	10.4	0.8	chr12	117475673	117476139	(15799170)	+	MLT1F1	LTR/ERVL-MaLR	3	556	(13)	960443
1745	18.9	2.9	1.5	chr12	117615548	117615885	(15659424)	+	MLT1F	LTR/ERVL-MaLR	206	548	(0)	960731
1821	13.7	0.0	2.9	chr12	117615898	117616175	(15659134)	+	AluJb	SINE/Alu	28	297	(15)	960732
1830	20.0	4.5	7.9	chr12	117899599	117900196	(15375113)	+	MLT1E1A	LTR/ERVL-MaLR	1	680	(0)	961348
1093	25.0	7.9	1.5	chr12	117959952	117960175	(15315134)	+	L2a	LINE/L2	2885	3108	(318)	961494
1108	22.3	12.2	8.4	chr12	117960271	117960735	(15314574)	+	MLT1H2	LTR/ERVL-MaLR	1	485	(4)	961496
409	24.4	11.2	0.8	chr12	117960756	117960787	(15314522)	+	MLT1J	LTR/ERVL-MaLR	1	33	(411)	961497
2142	24.8	5.2	0.4	chr12	119031001	119031530	(14243779)	C	MLT1F2	LTR/ERVL-MaLR	(3)	557	1	963848
433	26.8	12.5	0.0	chr12	120982496	120982679	(12292630)	+	MIR	SINE/MIR	37	268	(0)	968286
414	25.1	2.8	4.7	chr12	120982658	120982833	(12292476)	C	MIRc	SINE/MIR	(49)	181	4	968287
421	28.5	4.6	1.4	chr12	120982870	120983015	(12292294)	C	MIRc	SINE/MIR	(14)	254	104	968288
562	21.1	6.0	5.5	chr12	121798983	121799163	(11476146)	+	MER5A	DNA/hAT-Charlie	8	189	(0)	970348
631	22.2	5.0	14.5	chr12	123516328	123516596	(9758713)	+	LTR16A2	LTR/ERVL	250	491	(4)	974286
780	29.1	6.8	8.7	chr12	123516625	123516782	(9758527)	+	MLT1C	LTR/ERVL-MaLR	38	184	(283)	974287
471	27.1	10.0	8.9	chr12	123575785	123575855	(9699454)	+	LTR79	LTR/ERVL	425	487	(40)	974448
321	23.9	0.0	0.0	chr12	123575864	123575930	(9699379)	C	LTR33A	LTR/ERVL	(16)	504	438	974450
1633	19.9	12.4	0.3	chr12	123575936	123576283	(9699026)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	153	974451
761	17.5	0.0	0.0	chr12	123576298	123576411	(9698898)	+	AluSz	SINE/Alu	1	114	(198)	974452
1741	13.5	2.4	0.0	chr12	123576412	123576655	(9698654)	C	AluSz6	SINE/Alu	(62)	250	1	974453
282	28.8	9.9	0.7	chr12	124065964	124066246	(9209063)	C	L1ME4a	LINE/L1	(163)	5961	5650	975390
1181	20.9	12.5	3.5	chr12	124066248	124066560	(9208749)	C	MLT1E1	LTR/ERVL-MaLR	(0)	654	310	975391
2044	10.0	5.1	0.4	chr12	124066589	124066867	(9208442)	C	AluSq2	SINE/Alu	(19)	294	2	975392
807	15.1	2.0	6.9	chr12	124614090	124614248	(8661061)	+	AluJr4	SINE/Alu	119	269	(43)	976406
197	28.8	3.3	0.0	chr12	124614254	124614312	(8660997)	C	MIRb	SINE/MIR	(187)	81	21	976407
1495	23.9	13.8	4.4	chr12	124614352	124614923	(8660386)	C	MLT1E1	LTR/ERVL-MaLR	(17)	637	3	976408
2107	16.7	4.4	0.3	chr12	124722241	124722612	(8552697)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	3	976668
649	19.6	9.2	4.5	chr12	124722632	124722807	(8552502)	+	MLT1F2	LTR/ERVL-MaLR	411	595	(59)	976665
999	6.7	0.0	0.0	chr12	124722808	124722926	(8552383)	+	AluSc5	SINE/Alu	161	279	(30)	976669
1019	30.9	0.3	0.7	chr12	125201968	125202257	(8073052)	+	MLT1K	LTR/ERVL-MaLR	52	340	(255)	977765
1114	25.3	14.8	8.4	chr12	125202261	125202773	(8072536)	C	MLT1F2	LTR/ERVL-MaLR	(6)	554	3	977766
2134	20.2	11.7	1.8	chr12	125390441	125390948	(7884361)	+	MLT1F1	LTR/ERVL-MaLR	1	565	(4)	978157
277	28.5	5.4	7.6	chr12	128877537	128877707	(4397602)	C	L1ME4b	LINE/L1	(1)	891	725	984052
1644	23.0	10.8	1.3	chr12	128877714	128878172	(4397137)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	41	984053
1770	26.6	8.5	0.9	chr12	129921784	129922307	(3353002)	+	MLT1F1	LTR/ERVL-MaLR	1	567	(2)	985859
312	17.1	4.5	8.7	chr12	129922308	129922328	(3352981)	C	L1ME4a	LINE/L1	(95)	6029	6015	985858
4120	13.9	8.0	0.0	chr12	129964731	129965400	(3309909)	C	LTR9A1	LTR/ERV1	(0)	728	1	985943
710	24.5	16.4	3.4	chr12	129965401	129965696	(3309613)	C	MLT1E1	LTR/ERVL-MaLR	(1)	653	312	985944
345	24.8	3.2	1.1	chr12	129965759	129965871	(3309438)	C	MLT1E1	LTR/ERVL-MaLR	(422)	138	22	985944
219	31.5	11.0	0.6	chr12	132421649	132421811	(853498)	C	L2	LINE/L2	(980)	2439	2258	989435
236	33.5	7.3	4.0	chr12	132421814	132422115	(853194)	C	L2	LINE/L2	(1014)	2405	2093	989436
2545	7.4	0.0	0.0	chr13	20903346	20903656	(93460672)	C	AluSx1	SINE/Alu	(1)	311	1	995068
243	16.3	0.0	0.0	chr13	25287893	25287935	(89076393)	C	MER66B	LTR/ERV1	(417)	69	27	1001599
1393	26.9	10.3	2.7	chr13	27442009	27442978	(86921350)	+	L2a	LINE/L2	2335	3388	(38)	1004956
266	28.6	4.9	6.2	chr13	27516709	27516852	(86847476)	C	MIRb	SINE/MIR	(10)	252	109	1005098
31	8.0	0.0	0.0	chr13	27516853	27516892	(86847436)	+	(GT)n	Simple_repeat	1	40	(0)	1005099
294	22.4	10.6	1.3	chr13	27517060	27517136	(86847192)	C	MLT1K	LTR/ERVL-MaLR	(335)	260	176	1005100
246	31.8	1.5	0.0	chr13	27517161	27517226	(86847102)	C	L1M4	LINE/L1	(2051)	4095	4029	1005101
283	26.7	5.0	12.1	chr13	27517249	27517323	(86847005)	+	L1ME3F	LINE/L1	4106	4172	(1974)	1005102
2278	19.1	14.1	0.2	chr13	28598314	28598784	(85765544)	C	MLT1F	LTR/ERVL-MaLR	(1)	547	1	1007016
287	31.2	2.7	11.1	chr13	29143988	29144149	(85220179)	C	L2b	LINE/L2	(0)	3375	3228	1007797
1279	20.3	5.8	6.3	chr13	29144179	29144365	(85219963)	C	MLT1E1A	LTR/ERVL-MaLR	(2)	678	495	1007803
835	22.8	0.0	0.6	chr13	29144366	29144527	(85219801)	C	FRAM	SINE/Alu	(15)	161	1	1007804
1279	24.2	6.8	8.8	chr13	29144528	29144916	(85219412)	C	MLT1E1A	LTR/ERVL-MaLR	(186)	494	1	1007803
2139	23.8	3.8	1.6	chr13	29152373	29152920	(85211408)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	1007811
1150	24.2	4.5	4.1	chr13	29697376	29697858	(84666470)	+	MLT1F	LTR/ERVL-MaLR	10	548	(0)	1008498
2897	19.0	8.1	5.5	chr13	29964175	29964881	(84399447)	+	LTR8A	LTR/ERV1	1	727	(0)	1008892
1482	24.3	10.0	3.9	chr13	30345405	30345917	(84018411)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	1	1009505
1314	21.3	15.9	17.8	chr13	30858363	30858934	(83505394)	C	MLT1F2	LTR/ERVL-MaLR	(1)	559	1	1010501
1940	21.2	9.8	7.2	chr13	32842592	32843135	(81521193)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	1013428
1222	21.2	24.4	1.7	chr13	33345946	33346348	(81017980)	+	MLT1F2	LTR/ERVL-MaLR	1	500	(60)	1014173
912	30.3	9.9	3.9	chr13	34109128	34109361	(80254967)	C	L2a	LINE/L2	(0)	3426	3156	1015317
1430	26.4	11.4	6.4	chr13	34109362	34109891	(80254437)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	1015318
180	31.9	2.8	1.4	chr13	39778524	39778593	(74585735)	+	MIR	SINE/MIR	11	81	(181)	1023133
1442	24.2	13.6	0.8	chr13	39778594	39779068	(74585260)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	25	1023134
344	14.1	11.4	6.0	chr13	45545431	45545513	(68818815)	C	Tigger17c	DNA/TcMar-Tigger	(6)	1182	1095	1032489
336	30.5	5.4	0.7	chr13	45545606	45545747	(68818581)	C	MIRb	SINE/MIR	(114)	154	6	1032490
447	23.7	1.0	1.0	chr13	45545786	45545883	(68818445)	C	Tigger17c	DNA/TcMar-Tigger	(982)	206	109	1032491
622	14.6	0.0	1.0	chr13	45545917	45546013	(68818315)	+	Tigger17a	DNA/TcMar-Tigger	559	654	(0)	1032492
1052	20.5	1.6	5.2	chr13	47659832	47660099	(66704229)	C	MLT1E	LTR/ERVL-MaLR	(6)	647	390	1035592
422	25.5	3.3	6.3	chr13	47660085	47660247	(66704081)	C	MLT1E	LTR/ERVL-MaLR	(409)	160	1	1035592
4327	9.0	2.1	0.0	chr13	47660282	47660890	(66703438)	C	L1PA13	LINE/L1	(4)	6159	5538	1035593
1627	22.8	9.1	7.5	chr13	52651261	52651995	(61712333)	+	L1M5	LINE/L1	4048	4795	(1351)	1043444
721	25.9	25.5	3.6	chr13	54471837	54472119	(59892209)	C	MLT1E1	LTR/ERVL-MaLR	(0)	654	310	1045942
394	24.4	6.2	1.1	chr13	54472152	54472288	(59892040)	C	MLT1E1	LTR/ERVL-MaLR	(536)	144	1	1045942
901	25.5	17.0	0.7	chr13	58191662	58192148	(56172180)	C	MLT1E	LTR/ERVL-MaLR	(61)	592	1	1050443
1551	25.6	9.8	7.6	chr13	62162915	62163452	(52200876)	C	MLT1F2	LTR/ERVL-MaLR	(9)	551	1	1055645
1033	26.4	3.1	3.5	chr13	66136609	66136898	(48227430)	C	MLT1E1A	LTR/ERVL-MaLR	(5)	675	387	1060667
829	21.5	0.6	0.0	chr13	67221916	67222073	(47142255)	+	MER5A	DNA/hAT-Charlie	2	160	(29)	1062002
1321	24.7	17.7	2.1	chr13	67305431	67305901	(47058427)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	1062101
367	35.4	7.3	5.6	chr13	67390396	67390787	(46973541)	+	MLT1J	LTR/ERVL-MaLR	72	470	(42)	1062224
6494	4.8	0.2	0.1	chr13	67480084	67480883	(46883445)	C	L1PA5	LINE/L1	(6)	6148	5348	1062329
1344	26.1	7.8	2.8	chr13	71004852	71005370	(43358958)	C	MLT1F	LTR/ERVL-MaLR	(8)	583	9	1066895
1469	16.8	8.9	1.1	chr13	74130393	74130660	(40233668)	+	AluJr4	SINE/Alu	7	297	(15)	1071553
1223	24.3	5.1	8.4	chr13	74336334	74336738	(40027590)	+	MLT1E1A	LTR/ERVL-MaLR	287	677	(3)	1071836
1894	24.7	9.7	0.6	chr13	74673246	74673733	(39690595)	C	MLT1F	LTR/ERVL-MaLR	(10)	538	2	1072265
1983	24.6	5.6	7.0	chr13	75156347	75156911	(39207417)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	1072902
19	13.9	3.9	3.8	chr13	75482400	75482450	(38881878)	+	(TCCT)n	Simple_repeat	1	53	(0)	1073409
1983	23.3	4.0	9.3	chr13	76211449	76212049	(38152279)	+	MLT1F1	LTR/ERVL-MaLR	2	569	(0)	1074428
1595	25.2	11.4	0.6	chr13	76448432	76448906	(37915422)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	16	1074755
42	0.0	0.0	0.0	chr13	77478144	77478179	(36886149)	+	(AC)n	Simple_repeat	1	36	(0)	1076267
1429	17.1	1.9	5.3	chr13	85159059	85159380	(29204948)	+	L1MA9	LINE/L1	4282	4592	(1548)	1086184
3876	12.2	0.7	1.3	chr13	85159381	85159976	(29204352)	+	LTR1A2	LTR/ERV1	44	635	(202)	1086185
1213	24.2	14.5	3.9	chr13	90476299	90476758	(23887570)	+	MLT1E	LTR/ERVL-MaLR	137	653	(0)	1092982
924	25.6	19.1	0.9	chr13	91072470	91072926	(23291402)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	1093733
242	23.5	3.2	6.3	chr13	91072976	91073048	(23291280)	+	MIR3	SINE/MIR	83	150	(58)	1093734
14	27.5	1.7	3.3	chr13	91348957	91349016	(23015312)	+	(CGC)n	Simple_repeat	1	61	(0)	1094137
323	31.5	8.6	0.8	chr13	91739241	91739368	(22624960)	+	LTR16A1	LTR/ERVL	2	140	(316)	1094682
2243	22.8	7.2	0.0	chr13	91739377	91739877	(22624451)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	7	1094683
1303	24.6	5.5	9.9	chr13	94421272	94421748	(19942580)	+	MLT1F2	LTR/ERVL-MaLR	114	560	(0)	1098265
1044	31.3	7.1	1.3	chr13	96499335	96499907	(17864421)	C	L2a	LINE/L2	(3)	3423	2807	1101705
512	12.4	0.0	0.0	chr13	96499910	96499998	(17864330)	C	L1MB7	LINE/L1	(0)	6184	6096	1101706
2266	19.6	1.5	0.0	chr13	96500003	96500456	(17863872)	C	L1MB7	LINE/L1	(95)	6089	5629	1101707
12	10.7	2.9	5.7	chr13	110872136	110872169	(3492159)	+	(CCTCTC)n	Simple_repeat	1	35	(0)	1121887
437	26.7	5.7	4.3	chr13	110872228	110872456	(3491872)	+	MLT1F2	LTR/ERVL-MaLR	274	598	(82)	1121888
674	23.8	8.1	2.4	chr13	112262911	112263130	(2101198)	C	MLT1F1	LTR/ERVL-MaLR	(24)	545	252	1123339
264	33.8	0.0	0.0	chr13	112263157	112263233	(2101095)	C	MLT1F1	LTR/ERVL-MaLR	(372)	183	107	1123339
501	23.3	4.3	7.6	chr13	112263287	112263552	(2100776)	C	MLT1F1-int	LTR/ERVL-MaLR	(0)	1489	1107	1123339
326	35.6	13.2	3.3	chr13	112849679	112849861	(1514467)	C	L2c	LINE/L2	(0)	3387	3172	1123991
1371	18.9	6.5	6.3	chr13	113187336	113187925	(1176403)	C	L1M4	LINE/L1	(536)	5642	5060	1124301
2758	20.8	2.1	3.7	chr14	20519872	20520441	(86523277)	+	MLT1F1	LTR/ERVL-MaLR	1	561	(8)	1128198
2122	21.9	0.9	5.4	chr14	22856928	22857405	(84186313)	+	MLT1F	LTR/ERVL-MaLR	91	546	(2)	1131835
4354	28.8	4.7	7.8	chr14	22857406	22857754	(84185964)	+	MLT1F-int	LTR/ERVL-MaLR	1	330	(1041)	1131835
455	27.8	10.4	3.4	chr14	23380197	23380375	(83663343)	C	MIR3	SINE/MIR	(11)	197	5	1132790
16	22.2	0.0	0.0	chr14	24036320	24036361	(83007357)	+	(GCGGCGC)n	Simple_repeat	1	42	(0)	1133673
267	29.4	15.6	0.8	chr14	25032697	25032816	(82010902)	C	MIRb	SINE/MIR	(22)	246	106	1134982
1171	28.4	5.6	5.3	chr14	25464029	25464579	(81579139)	C	MLT1H1	LTR/ERVL-MaLR	(2)	553	1	1135585
2031	26.4	3.2	6.6	chr14	28967868	28968442	(78075276)	+	MLT1F2	LTR/ERVL-MaLR	6	560	(0)	1139939
745	32.2	3.8	4.1	chr14	28968444	28968757	(78074961)	C	L2a	LINE/L2	(192)	3234	2922	1139938
13	21.4	2.1	4.2	chr14	32077304	32077356	(74966362)	+	GA-rich	Low_complexity	1	51	(0)	1144640
15	17.7	0.0	0.0	chr14	32077370	32077401	(74966317)	+	(CGC)n	Simple_repeat	1	32	(0)	1144641
14	33.2	0.0	0.0	chr14	35388191	35388243	(71655475)	+	(GCA)n	Simple_repeat	1	53	(0)	1149935
184	32.1	6.2	3.6	chr14	35388328	35388437	(71655281)	C	L3	LINE/CR1	(3315)	784	672	1149936
16	15.3	0.0	2.6	chr14	39102972	39103024	(67940694)	+	(CCCCAGC)n	Simple_repeat	1	51	(0)	1155115
1932	22.6	5.0	5.3	chr14	50025641	50026157	(57017561)	+	MLT1F2	LTR/ERVL-MaLR	12	535	(25)	1169123
2309	11.0	0.7	0.0	chr14	50026158	50026456	(57017262)	+	AluSg4	SINE/Alu	2	302	(8)	1169124
599	10.0	0.0	0.0	chr14	50397842	50397931	(56645787)	C	L1MD3	LINE/L1	(2015)	5980	5891	1169910
746	21.1	9.1	1.1	chr14	50397959	50398140	(56645578)	+	MLT1F2	LTR/ERVL-MaLR	363	560	(0)	1169911
1591	21.6	17.5	7.2	chr14	52024168	52024665	(55019053)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	1172331
1578	22.1	12.3	7.9	chr14	55933712	55934163	(51109555)	+	MLT1F2	LTR/ERVL-MaLR	15	480	(80)	1178545
2403	11.3	5.0	0.3	chr14	55934164	55934526	(51109192)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1178546
1505	22.4	9.5	15.5	chr14	57275059	57275666	(49768052)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	2	1180535
12	11.2	7.1	4.4	chr14	57348493	57348534	(49695184)	+	A-rich	Low_complexity	1	45	(0)	1180618
1473	20.5	4.8	6.2	chr14	57348596	57348859	(49694859)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	433	1180619
1942	12.1	0.0	7.9	chr14	57348860	57349174	(49694544)	C	AluSx1	SINE/Alu	(18)	294	5	1180620
2638	7.2	0.3	0.7	chr14	58585231	58585536	(48458182)	+	AluY	SINE/Alu	1	305	(6)	1182485
1160	22.9	3.2	8.8	chr14	58585537	58585801	(48457917)	+	MLT1E1A	LTR/ERVL-MaLR	422	680	(0)	1182484
2450	19.9	1.2	6.8	chr14	60226240	60226772	(46816946)	C	MLT1F2	LTR/ERVL-MaLR	(57)	503	1	1184756
1521	24.4	16.6	5.7	chr14	61821338	61821832	(45221886)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	1187129
1674	21.1	5.7	6.7	chr14	62012057	62012620	(45031098)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	1	1187395
2342	21.2	7.9	4.9	chr14	65315818	65316475	(41727243)	+	MLT1E1A	LTR/ERVL-MaLR	1	680	(0)	1192899
2256	12.8	0.0	0.0	chr14	65316528	65316832	(41726886)	+	AluSx1	SINE/Alu	1	305	(7)	1192900
20	20.9	6.1	0.0	chr14	69611512	69611581	(37432137)	+	(GCCCCT)n	Simple_repeat	1	74	(0)	1199891
12	15.3	3.5	0.0	chr14	69611654	69611682	(37432036)	+	(CCTC)n	Simple_repeat	1	30	(0)	1199892
33	3.1	0.0	0.0	chr14	70641588	70641620	(36402098)	+	(CA)n	Simple_repeat	1	33	(0)	1201466
12	13.5	0.0	7.9	chr14	70641622	70641659	(36402059)	+	(CCCCTA)n	Simple_repeat	1	38	(0)	1201467
16	19.6	0.0	5.8	chr14	70641859	70641910	(36401808)	+	G-rich	Low_complexity	1	52	(0)	1201468
23	21.0	3.7	3.5	chr14	70641911	70641938	(36401780)	+	(GCGGAG)n	Simple_repeat	3	85	(0)	1201469
1057	28.0	6.6	9.6	chr14	72167072	72167510	(34876208)	C	MLT1F2	LTR/ERVL-MaLR	(121)	439	15	1203888
2526	23.8	3.2	0.7	chr14	72639319	72639864	(34403854)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	1204566
708	32.6	9.6	8.8	chr14	72639865	72641116	(34402602)	C	L2c	LINE/L2	(0)	3426	2044	1204565
1959	12.2	8.0	0.0	chr14	73845961	73846246	(33197472)	+	AluSz6	SINE/Alu	2	312	(0)	1207214
906	18.6	5.0	11.8	chr14	73846252	73846419	(33197299)	+	MLT1F2	LTR/ERVL-MaLR	340	496	(64)	1207215
2244	10.1	0.0	0.3	chr14	73846420	73846717	(33197001)	C	AluSg	SINE/Alu	(2)	308	12	1207216
1736	16.6	0.7	1.7	chr14	73848942	73849236	(33194482)	C	AluJb	SINE/Alu	(19)	293	2	1207224
1738	14.7	0.7	9.7	chr14	73849237	73849576	(33194142)	C	AluJr	SINE/Alu	(3)	309	1	1207225
1063	25.2	3.8	12.0	chr14	75291201	75291788	(31751930)	C	MLT1E3	LTR/ERVL-MaLR	(0)	624	16	1210131
1475	24.6	7.7	8.8	chr14	76234317	76234883	(30808835)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	1211836
2518	8.0	0.3	0.0	chr14	76234887	76235197	(30808521)	+	AluSp	SINE/Alu	1	312	(1)	1211837
2615	20.2	5.3	0.4	chr14	78473570	78474086	(28569632)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	5	1216301
1775	22.4	4.0	7.3	chr14	78499508	78499998	(28543720)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	85	1216347
2121	23.2	4.5	2.4	chr14	88313284	88313830	(18729888)	+	MLT1F1	LTR/ERVL-MaLR	4	562	(7)	1230254
1904	16.8	2.0	0.3	chr14	88561625	88561915	(18481803)	C	AluSz6	SINE/Alu	(16)	296	1	1230627
1359	18.1	6.0	7.4	chr14	88561916	88562133	(18481585)	+	MLT1E1A	LTR/ERVL-MaLR	459	673	(7)	1230625
1332	27.5	8.0	4.1	chr14	91527533	91528070	(15515648)	C	MLT1F1	LTR/ERVL-MaLR	(5)	564	4	1235873
265	21.9	1.5	1.5	chr14	92246603	92246667	(14797051)	C	Tigger15a	DNA/TcMar-Tigger	(37)	678	614	1237174
369	18.4	2.6	3.8	chr14	92246732	92246810	(14796908)	+	MLT1F1	LTR/ERVL-MaLR	370	447	(122)	1237175
908	27.0	6.4	0.0	chr14	92246872	92247164	(14796554)	C	Tigger12c	DNA/TcMar-Tigger	(129)	605	293	1237176
662	22.6	2.7	16.6	chr14	92849813	92849989	(14193729)	+	MLT1E1A	LTR/ERVL-MaLR	2	164	(396)	1238356
1428	24.0	5.0	4.0	chr14	92850053	92850429	(14193289)	+	MLT1E1A	LTR/ERVL-MaLR	295	675	(5)	1238356
1155	18.7	0.5	3.3	chr14	92894842	92895055	(14148663)	C	AluJr	SINE/Alu	(20)	292	85	1238454
976	19.1	1.8	6.6	chr14	92895058	92895157	(14148561)	+	MLT1F	LTR/ERVL-MaLR	295	394	(154)	1238453
2923	10.9	2.9	0.9	chr14	92895158	92895593	(14148125)	C	MER65A	LTR/ERV1	(0)	445	1	1238455
1848	21.7	16.4	3.9	chr14	95021750	95022213	(12021505)	+	MLT1F2	LTR/ERVL-MaLR	1	535	(34)	1242328
1951	26.0	3.9	1.4	chr14	95022214	95022805	(12020913)	+	L1M5	LINE/L1	3693	4300	(1846)	1242329
2418	22.2	2.7	3.4	chr14	95603852	95604416	(11439302)	+	MLT1F1	LTR/ERVL-MaLR	9	569	(0)	1243342
1546	22.4	11.5	0.5	chr14	96137325	96137697	(10906021)	C	MLT1F	LTR/ERVL-MaLR	(3)	545	127	1244312
199	24.2	1.6	3.1	chr14	96187001	96187064	(10856654)	C	L2a	LINE/L2	(243)	3183	3121	1244405
2073	22.3	10.3	1.0	chr14	96630286	96630665	(10413053)	C	MLT1F1	LTR/ERVL-MaLR	(24)	545	122	1245226
56	0.0	0.0	0.0	chr14	96630666	96630715	(10413003)	+	(TTA)n	Simple_repeat	1	50	(0)	1245227
2210	10.5	0.0	0.3	chr14	96630716	96631000	(10412718)	C	AluSx1	SINE/Alu	(28)	284	1	1245228
1271	25.7	1.8	6.3	chr14	96991025	96991423	(10052295)	C	MLT1E1A	LTR/ERVL-MaLR	(2)	678	298	1245865
1859	18.3	0.3	0.3	chr14	99428363	99428668	(7615050)	+	AluSz	SINE/Alu	1	306	(6)	1250025
1038	17.3	8.7	7.2	chr14	99428734	99428995	(7614723)	+	MLT1F2	LTR/ERVL-MaLR	254	519	(41)	1250026
317	28.2	8.3	9.1	chr14	99682656	99683053	(7360665)	C	MamGypLTR3	LTR/Gypsy	(12)	882	488	1250427
1735	24.6	8.7	1.6	chr14	101182362	101182873	(5860845)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	9	1252851
1338	23.5	2.8	2.5	chr14	101424213	101424531	(5619187)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	361	1253131
1946	3.9	0.0	1.7	chr14	105045353	105045583	(1998135)	C	AluSc5	SINE/Alu	(82)	227	1	1259160
203	39.2	1.2	0.2	chr14	105603172	105603918	(1439800)	+	(CCAGC)n	Simple_repeat	3	756	(0)	1259885
1351	27.1	1.3	1.1	chr15	28083948	28084320	(73906869)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	1273388
224	26.2	11.8	9.9	chr15	28084321	28084397	(73906792)	+	L2	LINE/L2	659	740	(2679)	1273387
821	23.4	8.6	14.1	chr15	28084485	28085066	(73906123)	C	MLT1F2	LTR/ERVL-MaLR	(6)	554	8	1273389
2298	17.8	10.8	2.2	chr15	28987226	28987724	(73003465)	C	MLT1F1	LTR/ERVL-MaLR	(2)	567	21	1274834
1559	21.6	14.2	1.0	chr15	31254346	31254742	(70736447)	+	MLT1F1	LTR/ERVL-MaLR	110	567	(2)	1278358
18	14.5	7.3	1.7	chr15	42575615	42575669	(59415520)	+	G-rich	Low_complexity	1	59	(0)	1295397
2598	22.6	0.9	1.3	chr15	42923477	42924026	(59067163)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	1296025
14	18.8	0.0	2.6	chr15	56243029	56243066	(45748123)	+	(CCCCCGC)n	Simple_repeat	1	38	(0)	1316883
2226	24.5	6.1	0.0	chr15	57891965	57892471	(44098718)	+	MLT1F	LTR/ERVL-MaLR	1	540	(8)	1319356
340	32.4	0.9	0.0	chr15	57950348	57950452	(44040737)	C	MIRc	SINE/MIR	(56)	212	107	1319434
227	30.0	4.8	2.9	chr15	57950719	57950821	(44040368)	+	L2c	LINE/L2	3282	3386	(1)	1319435
390	22.5	0.0	0.0	chr15	59801534	59801617	(42189572)	C	MLT1F1	LTR/ERVL-MaLR	(430)	130	46	1322775
1420	20.8	0.3	4.0	chr15	59801625	59801945	(42189244)	+	MLT1F1	LTR/ERVL-MaLR	151	459	(110)	1322776
282	28.1	12.9	1.3	chr15	59801957	59802322	(42188867)	+	L1M7	LINE/L1	4244	4672	(1542)	1322769
2267	9.5	0.3	0.0	chr15	63487695	63487990	(38503199)	C	AluSx1	SINE/Alu	(3)	309	13	1328673
356	29.6	6.6	0.0	chr15	66062069	66062210	(35928979)	C	L2a	LINE/L2	(251)	3175	3024	1333914
1742	22.4	3.0	4.9	chr15	66062214	66062739	(35928450)	+	MLT1E1A	LTR/ERVL-MaLR	57	678	(2)	1333915
439	24.8	11.1	2.4	chr15	66062740	66062904	(35928285)	C	L2a	LINE/L2	(315)	3111	2931	1333916
15	12.8	0.0	5.3	chr15	66631401	66631438	(35359751)	+	G-rich	Low_complexity	1	38	(0)	1335122
21	17.9	1.6	4.8	chr15	66673703	66673764	(35317425)	+	(CCCCA)n	Simple_repeat	1	63	(0)	1335225
689	24.4	5.8	3.0	chr15	66673836	66674034	(35317155)	+	MIR	SINE/MIR	56	260	(2)	1335226
2255	19.6	4.5	8.9	chr15	66835366	66835952	(35155237)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	1335547
237	17.6	1.9	3.8	chr15	66961556	66961608	(35029581)	+	L4_A_Mam	LINE/RTE-X	507	558	(4432)	1335797
12	26.0	1.7	4.9	chr15	66961965	66962024	(35029165)	+	(CCCCTCC)n	Simple_repeat	1	61	(0)	1335798
1592	21.2	12.5	4.8	chr15	67890478	67890932	(34100257)	+	MLT1F	LTR/ERVL-MaLR	4	513	(35)	1337320
1840	13.5	0.7	7.0	chr15	67890933	67891259	(34099930)	C	AluSz	SINE/Alu	(6)	306	1	1337321
693	28.5	2.0	5.4	chr15	68216602	68216905	(33774284)	C	L1ME4c	LINE/L1	(220)	610	333	1337929
608	22.1	18.8	1.0	chr15	68216906	68217097	(33774092)	+	MIR	SINE/MIR	29	262	(0)	1337930
247	16.1	3.5	1.8	chr15	68671414	68671470	(33319719)	+	MIRc	SINE/MIR	121	178	(90)	1338803
1234	20.9	12.6	5.9	chr15	68671489	68671925	(33319264)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	13	1338804
2459	20.4	5.0	1.7	chr15	69525901	69526438	(32464751)	+	MLT1F1	LTR/ERVL-MaLR	11	567	(2)	1340405
1496	21.6	3.8	0.3	chr15	69688302	69688608	(32302581)	+	MLT1F	LTR/ERVL-MaLR	220	537	(11)	1340722
1376	22.3	6.8	4.4	chr15	69750316	69750700	(32240489)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	286	1340842
3350	20.8	6.7	2.5	chr15	70908206	70908990	(31082199)	C	LTR8B	LTR/ERV1	(0)	820	1	1342951
2600	19.6	2.4	3.2	chr15	71460952	71461457	(30529732)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	45	1343768
319	32.3	10.4	5.1	chr15	73916034	73916092	(28075097)	+	L1M5	LINE/L1	4312	4375	(1771)	1347936
2735	20.8	2.0	7.1	chr15	73916093	73916683	(28074506)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	1347938
20	18.4	2.0	1.9	chr15	74615919	74615969	(27375220)	+	(GCG)n	Simple_repeat	1	52	(0)	1349184
16	14.7	0.0	0.0	chr15	74782153	74782207	(27208982)	+	(GCC)n	Simple_repeat	1	55	(0)	1349517
375	24.1	6.1	0.0	chr15	75335581	75335688	(26655501)	+	L1ME3A	LINE/L1	6043	6157	(16)	1350597
765	26.2	8.3	5.8	chr15	78960382	78960758	(23030431)	+	MLT1G3	LTR/ERVL-MaLR	209	595	(0)	1356963
307	32.5	5.3	0.0	chr15	78960759	78960884	(23030305)	+	L2b	LINE/L2	3243	3375	(0)	1356964
2218	19.3	13.2	1.2	chr15	79020773	79021265	(22969924)	+	MLT1F1	LTR/ERVL-MaLR	1	561	(8)	1357082
192	34.3	10.1	3.4	chr15	79021374	79021521	(22969668)	+	MIR3	SINE/MIR	48	206	(2)	1357083
1701	24.8	2.8	6.0	chr15	81739456	81740032	(20251157)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	1	1361738
1829	23.5	9.3	8.1	chr15	82897445	82897986	(19093203)	+	MLT1F2	LTR/ERVL-MaLR	1	549	(11)	1363635
248	23.0	7.7	0.0	chr15	82897994	82898081	(19093108)	C	MIRc	SINE/MIR	(10)	258	162	1363636
114	0.0	0.0	1.9	chr15	84928528	84928635	(17062554)	+	(TTCT)n	Simple_repeat	1	108	(0)	1366933
317	26.3	4.0	2.1	chr15	84968195	84968291	(17022898)	+	MIRb	SINE/MIR	106	204	(64)	1367029
2041	15.2	14.2	0.5	chr15	84968305	84968688	(17022501)	C	MLT1F	LTR/ERVL-MaLR	(103)	445	1	1367030
1222	22.3	13.1	3.4	chr15	88976588	88977094	(13014095)	+	MLT1F1	LTR/ERVL-MaLR	1	561	(8)	1373366
360	31.7	13.0	1.9	chr15	88977095	88977361	(13013828)	C	L1ME4c	LINE/L1	(171)	659	359	1373367
404	25.3	0.0	0.0	chr15	89026007	89026081	(12965108)	C	MER2	DNA/TcMar-Tigger	(270)	75	1	1373487
1434	23.8	6.5	11.3	chr15	89026094	89026642	(12964547)	C	MLT1F2	LTR/ERVL-MaLR	(39)	521	1	1373488
679	9.8	0.0	1.1	chr15	89520941	89521032	(12470157)	+	AluSz	SINE/Alu	1	91	(221)	1374370
788	26.2	8.5	1.4	chr15	89521033	89521361	(12469828)	+	MLT1F	LTR/ERVL-MaLR	220	555	(0)	1374371
7052	25.4	12.7	1.8	chr15	89586399	89589443	(12401746)	C	L2a	LINE/L2	(0)	3426	2	1374525
1268	20.8	14.1	1.2	chr15	91821211	91821531	(10169658)	+	MLT1F	LTR/ERVL-MaLR	178	546	(2)	1378923
2385	19.4	4.1	6.9	chr15	92656702	92657277	(9333912)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	2	1380172
518	31.3	4.8	3.4	chr15	95298524	95298728	(6692461)	+	MIRb	SINE/MIR	20	227	(41)	1384236
314	10.2	3.9	0.0	chr15	95299038	95299086	(6692103)	+	MLT1G3	LTR/ERVL-MaLR	1	51	(544)	1384237
13	22.7	0.0	0.0	chr15	95299109	95299144	(6692045)	+	(TAATT)n	Simple_repeat	1	36	(0)	1384238
12	13.9	0.0	0.0	chr15	96081974	96081997	(5909192)	+	(GTGT)n	Simple_repeat	1	24	(0)	1385353
1826	21.3	9.3	8.0	chr15	96082005	96082555	(5908634)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	2	1385354
1030	14.2	4.9	1.7	chr15	99308720	99308898	(2682291)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	496	1389947
2586	19.0	10.4	1.5	chr15	100859597	100860114	(1131075)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	1392016
244	26.5	8.4	0.0	chr15	101295783	101295880	(695309)	C	L1ME3	LINE/L1	(19)	6154	6048	1392606
993	27.8	14.5	1.9	chr15	101604180	101604864	(386325)	+	L2	LINE/L2	1484	2269	(1150)	1393003
1224	17.1	3.8	3.0	chr15	101604875	101605109	(386080)	+	MLT1F2	LTR/ERVL-MaLR	316	552	(8)	1393004
236	32.5	0.0	0.0	chr15	101645911	101645993	(345196)	+	L1M2	LINE/L1	5485	5567	(724)	1393057
737	27.2	8.9	2.5	chr15	101646120	101646540	(344649)	+	L1ME3E	LINE/L1	5769	6234	(9)	1393056
293	19.4	4.0	0.0	chr16	1025186	1025257	(89313088)	C	MER2	DNA/TcMar-Tigger	(3)	342	268	1395420
2169	11.4	0.0	2.0	chr16	1150339	1150644	(89187701)	+	AluSg	SINE/Alu	1	300	(10)	1395550
246	33.1	10.0	3.9	chr16	1481055	1481204	(88857141)	C	MIRb	SINE/MIR	(87)	181	24	1395981
12	12.0	0.0	6.5	chr16	1991423	1991453	(88346892)	+	(CTCC)n	Simple_repeat	1	31	(0)	1396752
602	33.2	2.8	3.3	chr16	1991586	1991797	(88346548)	+	MIR	SINE/MIR	40	250	(12)	1396753
19	23.6	2.5	5.0	chr16	2181606	2181688	(88156657)	+	G-rich	Low_complexity	1	80	(0)	1396989
50	2.5	4.4	5.3	chr16	2181695	2181785	(88156560)	+	(TGGGGC)n	Simple_repeat	1	95	(0)	1396990
2276	10.4	1.6	0.0	chr16	2423517	2423815	(87914530)	C	AluSq2	SINE/Alu	(5)	308	5	1397425
317	28.9	6.7	5.1	chr16	2939890	2940064	(87398281)	C	Charlie24	DNA/hAT-Charlie	(560)	1890	1713	1398215
250	24.6	3.4	0.0	chr16	2940041	2940097	(87398248)	C	Charlie24	DNA/hAT-Charlie	(1064)	1386	1328	1398215
857	22.3	6.5	0.5	chr16	2940098	2940300	(87398045)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	354	1398216
1875	15.9	1.0	0.7	chr16	2940442	2940736	(87397609)	C	AluSz	SINE/Alu	(16)	296	1	1398217
332	33.1	4.6	4.0	chr16	3101322	3101494	(87236851)	+	MIRb	SINE/MIR	70	243	(25)	1398495
1013	20.8	3.8	4.1	chr16	3101602	3101691	(87236654)	C	MER33	DNA/hAT-Charlie	(8)	316	232	1398496
676	21.6	2.0	1.6	chr16	3198172	3198385	(87139960)	C	MLT2B4	LTR/ERVL	(54)	502	237	1398715
1566	13.2	11.3	0.0	chr16	3574008	3574290	(86764055)	C	AluSx1	SINE/Alu	(0)	312	1	1399429
254	21.2	15.0	3.4	chr16	3574303	3574419	(86763926)	C	MER5B	DNA/hAT-Charlie	(43)	135	3	1399430
2311	16.8	10.1	4.0	chr16	3916852	3917378	(86420967)	+	MLT1F1	LTR/ERVL-MaLR	5	567	(2)	1400069
1172	22.5	10.6	2.6	chr16	4588345	4588705	(85749640)	C	MLT1F	LTR/ERVL-MaLR	(2)	652	154	1401478
18	0.0	0.0	0.0	chr16	4588706	4588725	(85749620)	+	(T)n	Simple_repeat	1	20	(0)	1401479
466	25.0	0.8	0.8	chr16	4588780	4588896	(85749449)	C	MIRb	SINE/MIR	(114)	154	38	1401480
973	26.4	9.8	9.6	chr16	8605318	8605857	(81732488)	+	MLT1F2	LTR/ERVL-MaLR	20	560	(0)	1409401
357	30.6	3.1	1.9	chr16	8605858	8606017	(81732328)	+	L1M5	LINE/L1	5553	5714	(410)	1409400
2077	21.5	5.8	7.5	chr16	8655096	8655653	(81682692)	C	MLT1F2	LTR/ERVL-MaLR	(8)	552	5	1409519
306	33.6	6.1	2.1	chr16	8740030	8740202	(81598143)	C	MIRb	SINE/MIR	(0)	208	30	1409750
1329	25.9	5.8	1.9	chr16	8740206	8740582	(81597763)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	168	1409751
384	23.2	4.8	2.0	chr16	8864454	8864554	(81473791)	C	MIR1_Amn	SINE/MIR	(41)	189	86	1410001
258	25.6	1.2	0.0	chr16	8864556	8864637	(81473708)	C	L2a	LINE/L2	(143)	3283	3201	1410002
2276	22.1	6.1	0.0	chr16	9416770	9417281	(80921064)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	4	1411315
1679	26.3	3.7	4.8	chr16	10202799	10203394	(80134951)	+	MLT1E1A	LTR/ERVL-MaLR	3	680	(0)	1412901
1791	21.1	9.9	2.0	chr16	10634541	10635043	(79703302)	+	MLT1F2	LTR/ERVL-MaLR	14	560	(0)	1413890
2218	9.8	0.0	0.0	chr16	10798684	10798959	(79539386)	C	AluSc5	SINE/Alu	(31)	278	3	1414249
1891	19.4	8.6	6.0	chr16	10798960	10799298	(79539047)	+	MLT1F	LTR/ERVL-MaLR	167	535	(13)	1414247
379	25.2	3.2	10.7	chr16	11035876	11036044	(79302301)	+	LTR103b_Mam	LTR/ERV1?	258	413	(135)	1414790
2715	21.3	8.1	0.2	chr16	11196019	11196540	(79141805)	+	MLT1F1	LTR/ERVL-MaLR	3	569	(0)	1415079
533	21.0	12.3	2.9	chr16	11196547	11196709	(79141636)	C	MIR	SINE/MIR	(38)	224	54	1415080
3044	12.2	0.7	0.2	chr16	11215703	11216128	(79122217)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1415129
2569	19.4	8.0	1.4	chr16	11216138	11216648	(79121697)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	1	1415130
1902	21.2	9.4	3.4	chr16	12134260	12134766	(78203579)	C	MLT1F	LTR/ERVL-MaLR	(7)	541	1	1417315
1909	23.5	5.5	6.8	chr16	12787760	12788316	(77550029)	C	MLT1F2	LTR/ERVL-MaLR	(4)	556	8	1418622
499	24.2	4.3	8.3	chr16	14154408	14154531	(76183814)	C	L1MEc	LINE/L1	(3977)	2423	2305	1421591
1553	26.5	11.8	4.8	chr16	14154532	14155050	(76183295)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	1421593
53	12.8	2.6	3.5	chr16	14416091	14416203	(75922142)	+	GA-rich	Low_complexity	1	116	(0)	1422114
779	21.6	13.3	3.0	chr16	14416378	14416640	(75921705)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	276	1422115
1162	8.6	0.0	0.0	chr16	14416691	14416830	(75921515)	C	AluSz	SINE/Alu	(171)	141	2	1422116
1152	23.1	12.9	2.5	chr16	14899222	14899624	(75438721)	+	MLT1F	LTR/ERVL-MaLR	1	451	(97)	1423193
2202	18.4	12.7	1.8	chr16	15740702	15741205	(74597140)	+	MLT1F1	LTR/ERVL-MaLR	3	569	(0)	1425092
341	25.4	2.2	8.4	chr16	15741206	15741275	(74597070)	+	MIR	SINE/MIR	160	219	(43)	1425091
321	25.8	4.4	2.2	chr16	15741286	15741424	(74596921)	+	MIRc	SINE/MIR	49	201	(67)	1425093
491	30.6	3.7	1.3	chr16	16101865	16102023	(74236322)	C	MLT1F2	LTR/ERVL-MaLR	(88)	472	310	1426092
466	24.6	23.0	0.0	chr16	16102025	16102215	(74236130)	C	MamRep38	DNA/hAT	(46)	249	2	1426093
621	26.2	10.1	2.0	chr16	18984524	18984722	(71353623)	+	MIRb	SINE/MIR	43	259	(9)	1432378
286	25.8	7.9	0.0	chr16	18984766	18984858	(71353487)	C	L1ME3	LINE/L1	(47)	6115	6015	1432379
1791	21.0	1.8	0.0	chr16	19100085	19100408	(71237937)	C	MLT1F	LTR/ERVL-MaLR	(42)	506	177	1432694
765	29.4	3.6	3.3	chr16	19155640	19155913	(71182432)	C	L2a	LINE/L2	(16)	3410	3136	1432843
1852	20.4	11.4	4.2	chr16	19155920	19156424	(71181921)	C	MLT1F2	LTR/ERVL-MaLR	(8)	552	7	1432844
1601	23.6	7.0	6.9	chr16	19156431	19157127	(71181218)	C	L2a	LINE/L2	(314)	3112	2424	1432843
2689	20.2	3.6	6.2	chr16	19225438	19226013	(71112332)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	1433029
1972	17.3	9.8	4.0	chr16	19387144	19387546	(70950799)	C	MLT1F1	LTR/ERVL-MaLR	(9)	560	132	1433450
1327	14.7	0.9	3.6	chr16	19387547	19387770	(70950575)	C	AluJb	SINE/Alu	(9)	303	86	1433451
2315	11.7	0.3	0.0	chr16	19768465	19768773	(70569572)	+	AluSx	SINE/Alu	1	310	(2)	1434301
289	30.3	1.6	11.8	chr16	19768774	19768816	(70569529)	+	MIRb	SINE/MIR	69	107	(161)	1434300
2386	19.7	9.4	1.5	chr16	19768817	19769336	(70569009)	C	MLT1F1	LTR/ERVL-MaLR	(4)	565	1	1434302
289	30.3	1.6	11.8	chr16	19769337	19769375	(70568970)	+	MIRb	SINE/MIR	108	146	(122)	1434300
1746	23.1	11.0	2.2	chr16	19806903	19807397	(70530948)	+	MLT1F	LTR/ERVL-MaLR	5	548	(0)	1434394
398	26.4	9.8	7.4	chr16	19807398	19807458	(70530887)	C	L2a	LINE/L2	(619)	2800	2740	1434389
746	18.7	1.8	1.8	chr16	19807478	19807640	(70530705)	+	MER5A1	DNA/hAT-Charlie	1	163	(3)	1434395
2235	10.2	2.4	0.6	chr16	19937447	19937771	(70400574)	+	L1PA11	LINE/L1	5844	6174	(0)	1434746
965	22.6	1.4	1.4	chr16	19937773	19937983	(70400362)	+	MLT1F2	LTR/ERVL-MaLR	350	560	(0)	1434744
243	23.3	4.0	2.7	chr16	19938011	19938085	(70400260)	+	L2	LINE/L2	1987	2062	(1357)	1434747
1586	23.9	11.0	2.8	chr16	20131825	20132365	(70205980)	+	MLT1G	LTR/ERVL-MaLR	1	591	(0)	1435227
1989	22.5	4.4	12.5	chr16	22692586	22693184	(67645161)	C	MLT1F2	LTR/ERVL-MaLR	(9)	551	4	1440606
955	28.2	9.5	5.8	chr16	22968469	22969015	(67369330)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	1441203
2803	22.0	2.9	0.7	chr16	23244133	23244682	(67093663)	+	MLT1F1	LTR/ERVL-MaLR	8	569	(0)	1441762
571	25.8	8.2	3.5	chr16	23244683	23245104	(67093241)	C	L1ME3G	LINE/L1	(350)	647	144	1441763
266	37.8	8.3	0.7	chr16	23407904	23408047	(66930298)	+	L2b	LINE/L2	3178	3333	(42)	1442202
823	31.0	6.3	11.8	chr16	23720518	23720614	(66617731)	+	L1M5	LINE/L1	4884	4972	(1174)	1442937
1884	21.8	6.8	10.3	chr16	23720615	23720976	(66617369)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	222	1442943
34	0.0	0.0	2.9	chr16	23720977	23721010	(66617335)	+	(AG)n	Simple_repeat	1	34	(0)	1442944
1884	21.8	6.8	10.3	chr16	23721011	23721102	(66617243)	C	MLT1F2	LTR/ERVL-MaLR	(339)	221	132	1442943
2082	11.3	1.0	3.7	chr16	23721103	23721402	(66616943)	C	AluSz	SINE/Alu	(20)	292	1	1442945
503	24.6	14.5	1.5	chr16	24537363	24537560	(65800785)	+	ORSL-2a	DNA/hAT-Tip100	87	314	(28)	1444967
2039	14.9	0.0	0.0	chr16	24914589	24914877	(65423468)	+	AluSx1	SINE/Alu	1	289	(23)	1445820
925	22.0	0.8	0.6	chr16	24915061	24915270	(65423075)	+	MLT1E1	LTR/ERVL-MaLR	346	652	(2)	1445821
203	23.4	10.5	1.3	chr16	25055676	25055753	(65282592)	+	L3	LINE/CR1	4006	4091	(8)	1446124
2348	8.5	0.7	0.3	chr16	25055840	25056145	(65282200)	+	AluSq2	SINE/Alu	1	307	(6)	1446125
1499	14.8	12.7	1.5	chr16	25759648	25759918	(64578427)	+	AluJr	SINE/Alu	6	311	(1)	1447653
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
283	29.5	6.9	3.2	chr16	27350712	27350837	(62987508)	C	L1ME4b	LINE/L1	(18)	874	744	1450956
1388	25.5	7.3	4.9	chr16	27350940	27351470	(62986875)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	16	1450957
1720	15.2	5.6	0.0	chr16	28950317	28950585	(61387760)	C	AluSz	SINE/Alu	(25)	287	3	1454832
13	11.7	3.6	0.0	chr16	28950961	28950988	(61387357)	+	(GGCGA)n	Simple_repeat	1	29	(0)	1454833
1546	23.6	11.7	3.0	chr16	29136109	29136605	(61201740)	+	MLT1F	LTR/ERVL-MaLR	3	548	(0)	1455250
361	31.2	0.0	3.5	chr16	31011217	31011332	(59327013)	C	L3	LINE/CR1	(112)	3987	3876	1459382
431	12.2	0.0	0.1	chr16	31011454	31011529	(59326816)	C	FLAM_C	SINE/Alu	(226)	76	2	1459383
236	29.4	9.0	9.7	chr16	31011533	31011798	(59326547)	+	L2c	LINE/L2	1987	2247	(1172)	1459384
14	13.9	2.9	2.9	chr16	31202707	31202740	(59135605)	+	(GCC)n	Simple_repeat	1	35	(0)	1459828
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
344	32.4	2.6	0.9	chr16	46621615	46621726	(43716619)	+	MIRc	SINE/MIR	4	117	(151)	1465698
305	19.1	4.2	3.4	chr16	48527984	48528053	(41810292)	C	L1MD	LINE/L1	(1143)	5003	4932	1468974
1339	22.2	9.0	5.1	chr16	48528054	48528616	(41809729)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	3	1468976
660	22.2	12.7	4.1	chr16	50260413	50260524	(40077821)	C	MLT1K	LTR/ERVL-MaLR	(112)	483	364	1472159
2037	22.0	12.8	0.2	chr16	50260525	50261002	(40077343)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	2	1472160
1214	23.8	9.7	9.1	chr16	50370974	50371412	(39966933)	+	MLT1F2	LTR/ERVL-MaLR	33	474	(86)	1472328
268	29.6	0.0	5.8	chr16	50371566	50371669	(39966676)	+	MIRb	SINE/MIR	171	268	(0)	1472329
402	30.7	7.6	2.0	chr16	50371689	50372203	(39966142)	+	L2a	LINE/L2	2824	3426	(0)	1472330
2318	22.6	4.3	0.8	chr16	54192243	54192737	(36145608)	+	MLT1F	LTR/ERVL-MaLR	2	514	(34)	1479049
1912	23.2	5.6	6.8	chr16	55191876	55192435	(35145910)	+	MLT1F2	LTR/ERVL-MaLR	7	559	(1)	1480946
4766	23.3	9.4	4.0	chr16	57595506	57595617	(32742728)	C	L1ME3B	LINE/L1	(1656)	4490	4380	1485379
1617	22.2	13.8	0.8	chr16	57595618	57596102	(32742243)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	1	1485381
419	22.5	7.2	3.0	chr16	57831342	57831405	(32506940)	C	MER5A1	DNA/hAT-Charlie	(0)	166	101	1485840
2260	20.6	8.7	1.5	chr16	64230087	64230601	(26107744)	+	L1MB5	LINE/L1	5609	6167	(7)	1496038
731	26.5	2.4	6.5	chr16	64230608	64230821	(26107524)	C	MLT1E1	LTR/ERVL-MaLR	(46)	634	430	1496037
1888	19.1	9.5	3.4	chr16	66640661	66641044	(23697301)	+	MLT1F	LTR/ERVL-MaLR	66	485	(63)	1500092
1708	17.0	4.6	0.0	chr16	66641045	66641333	(23697012)	C	AluJr	SINE/Alu	(9)	303	1	1500093
18	13.9	0.0	0.0	chr16	67993133	67993164	(22345181)	+	(AGC)n	Simple_repeat	1	32	(0)	1502700
643	24.9	8.2	5.1	chr16	71587667	71587962	(18750383)	+	MLT1H	LTR/ERVL-MaLR	1	306	(243)	1509961
283	27.5	12.8	0.0	chr16	71587976	71588084	(18750261)	+	MLT1H	LTR/ERVL-MaLR	329	453	(116)	1509961
2150	23.9	6.3	3.5	chr16	73000955	73001496	(17336849)	+	MLT1F2	LTR/ERVL-MaLR	3	560	(0)	1512262
1666	20.4	1.0	2.8	chr16	73001531	73001848	(17336497)	+	AluJb	SINE/Alu	1	312	(0)	1512263
2115	21.2	11.4	6.8	chr16	74181680	74182211	(16156134)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	1514148
4420	16.0	2.6	0.4	chr16	76108853	76109642	(14228703)	+	L1MA9	LINE/L1	5505	6312	(0)	1517918
1986	25.9	4.6	11.5	chr16	76109643	76109947	(14228398)	+	MLT1E1A	LTR/ERVL-MaLR	410	680	(0)	1517917
2104	22.2	7.5	8.9	chr16	78622598	78623263	(11715082)	+	MLT1E1A	LTR/ERVL-MaLR	17	672	(8)	1522057
1959	22.1	7.7	7.2	chr16	81735431	81735930	(8602415)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	67	1527895
1787	21.4	9.8	2.2	chr16	82507775	82508339	(7830006)	+	MLT1E1A	LTR/ERVL-MaLR	3	680	(0)	1529342
1249	29.9	8.6	0.2	chr16	84246172	84246670	(6091675)	+	L1ME4b	LINE/L1	274	818	(74)	1532426
1849	11.7	0.0	0.0	chr16	84246967	84247222	(6091123)	C	AluSx	SINE/Alu	(55)	257	2	1532427
1217	24.2	12.8	0.8	chr16	85225745	85226144	(5112201)	C	MLT1F	LTR/ERVL-MaLR	(1)	547	93	1534431
660	22.4	13.1	5.0	chr16	85352993	85353194	(4985151)	C	MLT1E1	LTR/ERVL-MaLR	(0)	654	434	1534695
317	27.2	2.8	3.7	chr16	85353188	85353294	(4985051)	C	MLT1E1	LTR/ERVL-MaLR	(152)	475	370	1534695
755	21.3	0.6	2.3	chr16	85353295	85353467	(4984878)	C	L1M4	LINE/L1	(470)	5708	5539	1534696
1942	14.5	2.4	0.3	chr16	85402640	85402929	(4935416)	+	AluJb	SINE/Alu	1	296	(16)	1534782
1216	24.5	11.0	4.6	chr16	85402930	85403412	(4934933)	C	MLT1F2	LTR/ERVL-MaLR	(30)	530	1	1534781
316	25.0	8.9	0.0	chr16	85574321	85574412	(4763933)	C	MIR3	SINE/MIR	(90)	118	18	1535087
1284	24.7	9.5	2.2	chr16	85629860	85630350	(4707995)	C	MLT1F	LTR/ERVL-MaLR	(1)	594	19	1535157
2516	15.7	13.4	0.6	chr16	85711894	85712387	(4625958)	+	MLT1F1	LTR/ERVL-MaLR	1	567	(2)	1535277
401	33.5	12.3	3.6	chr16	86244481	86245104	(4093241)	C	L2b	LINE/L2	(7)	3368	2679	1536308
331	30.0	5.0	10.7	chr16	86245152	86245467	(4092878)	C	MLT1E2	LTR/ERVL-MaLR	(88)	566	254	1536309
2140	15.5	18.9	0.7	chr16	86412719	86413179	(3925166)	+	MLT1F1	LTR/ERVL-MaLR	5	569	(0)	1536611
2198	14.1	0.3	0.7	chr16	87149311	87149616	(3188729)	+	AluSz	SINE/Alu	2	306	(6)	1537892
2631	25.4	6.4	4.8	chr16	87149617	87149665	(3188680)	+	L1M4a1	LINE/L1	924	963	(1616)	1537889
1258	18.7	3.4	3.0	chr16	87149686	87149950	(3188395)	+	MLT1F1	LTR/ERVL-MaLR	304	569	(0)	1537893
1652	18.8	2.0	2.6	chr16	87545720	87546027	(2792318)	+	AluJo	SINE/Alu	1	306	(6)	1538633
1188	25.3	9.1	6.2	chr16	87546028	87546522	(2791823)	C	MLT1E1A	LTR/ERVL-MaLR	(57)	623	1	1538632
950	29.9	7.7	2.5	chr16	88095597	88096004	(2242341)	+	MLT1F	LTR/ERVL-MaLR	12	442	(106)	1539533
274	29.4	8.0	0.0	chr16	88096027	88096118	(2242227)	+	MLT1F-int	LTR/ERVL-MaLR	255	354	(1135)	1539533
16	0.0	0.0	4.2	chr16	88096132	88096155	(2242190)	+	(TTTA)n	Simple_repeat	1	24	(0)	1539534
1594	24.7	11.2	2.2	chr16	88096476	88096971	(2241374)	+	MLT1F	LTR/ERVL-MaLR	3	548	(0)	1539533
715	26.7	6.2	1.0	chr16	88108731	88109076	(2229269)	+	MLT1F	LTR/ERVL-MaLR	140	547	(1)	1539549
319	25.2	13.3	0.0	chr16	88109263	88109405	(2228940)	+	LTR16	LTR/ERVL	274	438	(0)	1539550
612	21.5	2.0	0.1	chr16	88421999	88423330	(1915015)	+	(GGAT)n	Simple_repeat	1	1359	(0)	1539955
1892	21.4	10.7	0.6	chr16	88423503	88424006	(1914339)	C	MLT1F1	LTR/ERVL-MaLR	(7)	562	2	1539956
182	25.3	10.8	5.2	chr16	88810634	88810729	(1527616)	+	LFSINE_Vert	SINE/tRNA	223	324	(135)	1540477
261	30.0	3.0	4.6	chr16	88810708	88810854	(1527491)	+	MIRb	SINE/MIR	36	177	(91)	1540478
209	32.1	11.0	0.0	chr16	89003510	89003590	(1334755)	+	MIRb	SINE/MIR	86	176	(92)	1540686
13	15.6	5.6	0.0	chr16	89003673	89003708	(1334637)	+	(CCAGGCC)n	Simple_repeat	1	38	(0)	1540687
1692	23.2	16.6	0.9	chr16	89087646	89088105	(1250240)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	2	1540786
501	26.0	7.3	8.3	chr16	89088106	89088137	(1250208)	C	MIRb	SINE/MIR	(201)	67	40	1540784
307	33.3	1.5	3.7	chr16	89473762	89473895	(864450)	+	MLT1E1A	LTR/ERVL-MaLR	34	164	(396)	1541324
1213	22.6	10.3	2.7	chr16	89473965	89474332	(864013)	+	MLT1E1A	LTR/ERVL-MaLR	282	680	(0)	1541324
808	13.5	0.0	5.7	chr16	89474335	89474475	(863870)	+	FLAM_C	SINE/Alu	1	133	(10)	1541325
2038	15.6	0.7	1.0	chr17	241839	242145	(83015296)	+	AluSz6	SINE/Alu	6	311	(1)	1544857
15	18.1	0.0	0.0	chr17	410591	410622	(82846819)	+	GA-rich	Low_complexity	1	32	(0)	1545160
2066	15.6	0.0	0.7	chr17	2540632	2540939	(80716502)	+	AluJb	SINE/Alu	1	306	(6)	1549372
458	17.2	2.1	0.0	chr17	2541031	2541123	(80716318)	C	MamGypLTR2b	LTR/Gypsy	(51)	871	777	1549373
386	25.0	13.5	2.2	chr17	4332429	4332612	(78924829)	+	L2a	LINE/L2	2756	2963	(456)	1552778
374	29.2	22.6	2.2	chr17	4332699	4333059	(78924382)	+	L2a	LINE/L2	2971	3426	(0)	1552778
1526	23.5	3.8	7.3	chr17	4645537	4645976	(78611465)	+	MLT1F	LTR/ERVL-MaLR	2	425	(123)	1553454
1152	19.1	1.1	0.0	chr17	4646010	4646198	(78611243)	C	AluJb	SINE/Alu	(8)	304	114	1553456
2542	15.0	23.9	1.2	chr17	5110749	5111335	(78146106)	C	MER4CL34	LTR/ERV1	(3)	762	1	1554453
2307	11.4	0.3	0.0	chr17	6145684	6145989	(77111452)	+	AluSq2	SINE/Alu	2	308	(5)	1556479
1241	29.2	8.0	5.9	chr17	6145990	6146461	(77110980)	C	MLT1G3	LTR/ERVL-MaLR	(107)	488	1	1556478
24	21.1	1.7	0.0	chr17	9064180	9064239	(74193202)	+	(ATCC)n	Simple_repeat	1	61	(0)	1562000
274	34.3	15.7	2.1	chr17	9064240	9064772	(74192669)	+	L2b	LINE/L2	2183	2801	(618)	1562001
982	15.2	4.6	0.0	chr17	9064775	9064919	(74192522)	C	AluJb	SINE/Alu	(21)	291	140	1562002
1640	25.6	8.9	1.0	chr17	9989758	9989987	(73267454)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	311	1563813
2608	6.6	0.0	0.0	chr17	9989988	9990292	(73267149)	+	AluYh3	SINE/Alu	1	305	(6)	1563814
441	34.0	3.6	10.1	chr17	10851208	10851226	(72406215)	+	MLT1J	LTR/ERVL-MaLR	107	125	(387)	1565412
2356	22.4	5.5	1.3	chr17	10851227	10851770	(72405671)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	2	1565413
399	27.0	6.0	2.3	chr17	13355133	13355261	(69902180)	+	MIR	SINE/MIR	11	144	(118)	1569638
2284	9.6	1.0	0.0	chr17	13355519	13355809	(69901632)	C	AluSx1	SINE/Alu	(18)	294	1	1569639
2084	11.6	2.7	0.0	chr17	14068933	14069216	(69188225)	C	AluJr	SINE/Alu	(20)	292	1	1570862
1459	22.3	7.3	5.0	chr17	14258575	14259050	(68998391)	C	MLT1E1A	LTR/ERVL-MaLR	(2)	678	83	1571131
664	28.2	5.5	8.5	chr17	14465885	14466125	(68791316)	+	MER113	DNA/hAT-Charlie	70	313	(208)	1571496
1545	22.6	8.0	0.6	chr17	14466132	14466491	(68790950)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	160	1571498
1905	21.1	3.1	4.2	chr17	15455421	15456000	(67801441)	+	MLT1F1	LTR/ERVL-MaLR	6	567	(2)	1573071
834	22.9	6.2	4.8	chr17	17287878	17288250	(65969191)	C	MLT1E1A	LTR/ERVL-MaLR	(24)	656	192	1576355
1225	26.5	15.7	0.2	chr17	17396421	17396881	(65860560)	+	MLT1F	LTR/ERVL-MaLR	1	540	(8)	1576598
568	21.4	0.9	0.0	chr17	17396891	17397002	(65860439)	+	LTR16E1	LTR/ERVL	426	538	(0)	1576597
2408	19.8	11.1	4.3	chr17	20053400	20053928	(63203513)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	1581855
324	34.6	18.0	1.0	chr17	20053929	20054235	(63203206)	+	L2	LINE/L2	2500	2856	(563)	1581854
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26935986	26936392	(56321049)	+	(GAATG)n	Satellite	1	409	(0)	1585984
411	16.2	4.2	0.0	chr17	26936393	26936460	(56320981)	+	AluYj4	SINE/Alu	224	294	(17)	1585985
363	31.5	12.5	5.9	chr17	27545541	27545755	(55711686)	C	L2b	LINE/L2	(33)	3342	3103	1587007
13	33.8	2.4	2.4	chr17	28727120	28727201	(54530240)	+	G-rich	Low_complexity	1	84	(0)	1589204
1047	14.7	0.0	0.7	chr17	30676647	30676796	(52580645)	+	AluJo	SINE/Alu	134	282	(30)	1593000
34	0.0	0.0	0.0	chr17	30676803	30676834	(52580607)	+	(TTAA)n	Simple_repeat	1	32	(0)	1593001
1521	22.2	6.7	5.7	chr17	30676884	30677102	(52580339)	C	MLT1F2	LTR/ERVL-MaLR	(155)	405	192	1593002
2056	12.6	1.7	0.0	chr17	30677103	30677388	(52580053)	+	AluSg	SINE/Alu	2	292	(18)	1593003
1415	14.2	0.5	0.0	chr17	31051204	31051407	(52206034)	C	AluJo	SINE/Alu	(107)	205	1	1593896
1307	18.9	0.9	0.0	chr17	31051413	31051639	(52205802)	+	MLT1F	LTR/ERVL-MaLR	320	548	(0)	1593897
429	29.1	4.5	0.0	chr17	31051661	31051808	(52205633)	C	L3	LINE/CR1	(187)	3912	3758	1593898
1954	26.1	4.8	2.8	chr17	31134461	31134995	(52122446)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	1	1594072
1374	17.5	3.5	0.8	chr17	31141595	31141848	(52115593)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	309	1594088
21	24.8	0.0	1.7	chr17	31937083	31937140	(51320301)	+	(CCTTC)n	Simple_repeat	1	58	(0)	1595692
66	1.8	5.4	6.6	chr17	32243320	32243449	(51013992)	+	(TA)n	Simple_repeat	1	137	(0)	1596383
2409	18.4	9.5	2.9	chr17	32243450	32243946	(51013495)	C	MLT1F1	LTR/ERVL-MaLR	(17)	552	6	1596381
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
25	28.1	0.0	6.6	chr17	35089283	35089292	(48168149)	+	(CCCCG)n	Simple_repeat	1	25	(96)	1601649
12	24.0	3.9	6.2	chr17	35089293	35089369	(48168072)	+	(CCCAGC)n	Simple_repeat	1	80	(0)	1601650
25	28.1	0.0	6.6	chr17	35089370	35089403	(48168038)	+	(CCCCG)n	Simple_repeat	26	121	(0)	1601649
2228	21.1	7.2	1.2	chr17	35164201	35164719	(48092722)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	17	1601846
2184	19.2	13.0	0.8	chr17	37797944	37798437	(45459004)	C	MLT1F1	LTR/ERVL-MaLR	(2)	567	5	1606560
270	29.9	0.0	1.1	chr17	41741038	41741125	(41516316)	+	L2c	LINE/L2	3103	3189	(198)	1614176
2089	13.8	0.6	0.3	chr17	41741354	41741664	(41515777)	+	AluJb	SINE/Alu	1	312	(0)	1614177
331	26.1	6.2	2.1	chr17	43036118	43036255	(40221186)	+	MIR3	SINE/MIR	35	178	(30)	1616926
727	11.4	0.0	0.0	chr17	43036706	43036810	(40220631)	C	L1MB5	LINE/L1	(0)	6174	6070	1616927
192	28.6	9.7	6.2	chr17	43656212	43656420	(39601021)	C	L2c	LINE/L2	(239)	3148	2932	1618338
18	19.6	0.0	0.0	chr17	44086972	44087006	(39170435)	+	G-rich	Low_complexity	1	35	(0)	1619199
13	33.2	0.0	0.0	chr17	44087101	44087153	(39170288)	+	(ACAC)n	Simple_repeat	1	53	(0)	1619200
12	26.1	4.9	4.7	chr17	44087326	44087406	(39170035)	+	G-rich	Low_complexity	1	85	(0)	1619201
2154	11.3	0.0	1.0	chr17	44297726	44298026	(38959415)	C	AluSx	SINE/Alu	(14)	298	1	1619643
3253	31.2	9.4	8.3	chr17	44298027	44298586	(38958855)	C	ERVL-E-int	LTR/ERVL	(4701)	966	345	1619632
2411	9.1	0.0	0.0	chr17	45587957	45588253	(37669188)	+	AluSc	SINE/Alu	1	297	(12)	1622337
1367	10.3	1.9	4.2	chr17	45588254	45588273	(37669168)	C	L1PB1	LINE/L1	(470)	5681	5662	1622336
1262	22.4	5.2	0.7	chr17	45588337	45588632	(37668809)	+	MLT1F1	LTR/ERVL-MaLR	227	536	(33)	1622338
2976	19.0	3.9	0.6	chr17	45679315	45679864	(37577577)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	1622579
524	27.9	3.8	0.0	chr17	45680009	45680162	(37577279)	C	MIRb	SINE/MIR	(102)	166	7	1622580
17	23.2	0.0	0.0	chr17	48049056	48049091	(35208350)	+	(GT)n	Simple_repeat	1	36	(0)	1627188
2527	20.0	8.8	0.2	chr17	49474409	49474909	(33782532)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	1630011
26	28.1	1.2	1.2	chr17	50565091	50565170	(32692271)	+	(AC)n	Simple_repeat	1	81	(0)	1632039
2354	9.9	0.0	0.3	chr17	50941390	50941691	(32315750)	+	AluSz	SINE/Alu	3	303	(9)	1632784
2207	12.4	0.7	0.0	chr17	50941862	50942167	(32315274)	C	AluSz6	SINE/Alu	(4)	308	1	1632785
315	31.3	0.0	1.0	chr17	55100674	55100773	(28156668)	+	MLT1E1A	LTR/ERVL-MaLR	1	99	(581)	1639057
915	22.6	1.9	0.8	chr17	55100912	55101145	(28156296)	+	MLT1E1A	LTR/ERVL-MaLR	356	679	(1)	1639057
2124	21.2	9.7	2.4	chr17	58617757	58618263	(24639178)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	1645335
319	32.5	9.4	1.4	chr17	58618268	58618436	(24639005)	C	MIR3	SINE/MIR	(20)	188	7	1645336
848	14.1	0.8	1.5	chr17	59848645	59848779	(23408662)	C	FLAM_A	SINE/Alu	(7)	135	2	1648082
1757	13.7	0.0	7.3	chr17	59848848	59849160	(23408281)	C	AluJb	SINE/Alu	(21)	291	2	1648083
2008	16.7	1.0	0.0	chr17	60553418	60553722	(22703719)	C	AluJb	SINE/Alu	(3)	309	2	1649515
1689	18.9	12.9	4.6	chr17	60553723	60553892	(22703549)	+	MLT1F1	LTR/ERVL-MaLR	335	527	(42)	1649514
2076	16.8	0.0	0.0	chr17	60553893	60554202	(22703239)	C	AluSx	SINE/Alu	(2)	310	1	1649516
1689	18.9	12.9	4.6	chr17	60554203	60554256	(22703185)	+	MLT1F1	LTR/ERVL-MaLR	528	568	(1)	1649514
2521	8.6	0.0	0.0	chr17	61321921	61322233	(21935208)	C	AluSp	SINE/Alu	(0)	313	1	1650870
344	27.4	4.3	9.4	chr17	61322234	61322295	(21935146)	+	MIRc	SINE/MIR	168	225	(43)	1650869
19	12.8	2.9	0.0	chr17	63934028	63934061	(19323380)	+	(GT)n	Simple_repeat	1	35	(0)	1655609
290	26.6	2.1	2.1	chr17	64271621	64271713	(18985728)	+	MLT1G1	LTR/ERVL-MaLR	3	95	(460)	1656189
2294	24.9	3.5	0.8	chr17	64271714	64272238	(18985203)	+	MLT1F	LTR/ERVL-MaLR	1	540	(8)	1656190
895	27.7	9.2	2.7	chr17	64272248	64272652	(18984789)	+	MLT1G1	LTR/ERVL-MaLR	140	573	(6)	1656189
1701	23.9	6.0	10.2	chr17	65449483	65450063	(17807378)	+	MLT1F2	LTR/ERVL-MaLR	4	558	(2)	1658686
3739	26.1	7.2	3.4	chr17	66206755	66208326	(17049115)	+	ERV3-16A3_I-int	LTR/ERVL	3288	5082	(675)	1659836
1009	26.0	1.5	1.8	chr17	66208388	66208661	(17048780)	+	ERV3-16A3_I-int	LTR/ERVL	4933	5205	(21)	1659836
523	23.8	2.7	3.6	chr17	66208724	66208896	(17048545)	+	MLT1F2	LTR/ERVL-MaLR	287	530	(150)	1659837
3114	13.8	3.5	0.3	chr17	66208904	66209487	(17047954)	C	L1M2	LINE/L1	(1282)	4861	4259	1659838
1744	18.9	0.7	0.3	chr17	66552016	66552312	(16705129)	+	AluJb	SINE/Alu	1	298	(14)	1660442
1673	22.5	11.1	7.1	chr17	66552315	66552849	(16704592)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	2	1660443
2431	7.3	0.6	1.6	chr17	66869802	66870117	(16387324)	+	AluSq	SINE/Alu	1	313	(0)	1660950
1367	25.0	3.8	9.0	chr17	66870118	66870379	(16387062)	C	MLT1H1	LTR/ERVL-MaLR	(51)	504	261	1660949
914	19.5	12.8	0.0	chr17	66870380	66870569	(16386872)	+	MER20	DNA/hAT-Charlie	2	219	(0)	1660951
1367	25.0	3.8	9.0	chr17	66870570	66870697	(16386744)	C	MLT1H1	LTR/ERVL-MaLR	(295)	260	142	1660949
2359	8.6	0.0	0.0	chr17	68119059	68119349	(15138092)	+	AluSc8	SINE/Alu	2	292	(19)	1663570
3523	21.7	4.5	3.0	chr17	68119350	68119480	(15137961)	+	L1ME3	LINE/L1	5607	5738	(424)	1663569
757	25.6	17.3	8.0	chr17	68812097	68812598	(14444843)	+	MLT1F2	LTR/ERVL-MaLR	13	560	(0)	1664835
973	25.4	7.6	2.1	chr17	69974156	69974440	(13283001)	C	MLT1F1-int	LTR/ERVL-MaLR	(1171)	318	17	1666609
2192	20.5	3.8	0.9	chr17	69974459	69974983	(13282458)	C	MLT1F1	LTR/ERVL-MaLR	(5)	564	7	1666609
452	24.2	0.8	0.0	chr17	69995226	69995345	(13262096)	+	L1MA9	LINE/L1	6192	6312	(0)	1666640
811	26.4	5.1	15.3	chr17	69995372	69995698	(13261743)	C	MLT1E1A	LTR/ERVL-MaLR	(149)	531	121	1666634
2413	23.5	4.1	0.4	chr17	70243554	70244074	(13013367)	C	MLT1F	LTR/ERVL-MaLR	(5)	543	3	1667003
780	24.6	4.2	1.6	chr17	72548888	72549073	(10708368)	+	MIR	SINE/MIR	15	205	(57)	1670586
2219	22.4	3.3	0.2	chr17	72549076	72549264	(10708177)	+	MLT1F2	LTR/ERVL-MaLR	8	199	(361)	1670587
35	0.0	0.0	0.0	chr17	72549265	72549297	(10708144)	+	(TTTC)n	Simple_repeat	1	33	(0)	1670588
2219	22.4	3.3	0.2	chr17	72549298	72549643	(10707798)	+	MLT1F2	LTR/ERVL-MaLR	200	559	(1)	1670587
2068	21.4	6.3	9.7	chr17	73730974	73731552	(9525889)	+	MLT1F2	LTR/ERVL-MaLR	1	558	(2)	1672857
1058	22.9	0.9	0.9	chr17	73893136	73893355	(9364086)	+	MLT1F2	LTR/ERVL-MaLR	341	560	(0)	1673130
2253	18.5	1.9	0.2	chr17	74056635	74057051	(9200390)	+	MSTB	LTR/ERVL-MaLR	3	426	(0)	1673417
1859	23.8	7.0	3.7	chr17	74057052	74057566	(9199875)	C	MLT1F2	LTR/ERVL-MaLR	(23)	537	1	1673416
12	14.8	3.0	2.9	chr17	74060631	74060663	(9196778)	+	(CCTC)n	Simple_repeat	1	34	(0)	1673422
360	24.7	4.5	2.3	chr17	74060664	74060750	(9196691)	+	MLT1F2	LTR/ERVL-MaLR	326	414	(146)	1673423
559	26.5	16.3	2.2	chr17	74060864	74061094	(9196347)	C	LTR81B	LTR/Gypsy	(1120)	273	4	1673424
1778	21.4	7.0	5.5	chr17	74068906	74069453	(9187988)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	4	1673444
2308	23.3	12.0	3.0	chr17	74121249	74121379	(9136062)	+	L2a	LINE/L2	2302	2433	(986)	1673527
2198	22.5	6.8	5.7	chr17	74121380	74121878	(9135563)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	37	1673528
1871	17.6	1.7	0.3	chr17	74408127	74408421	(8849020)	+	AluJb	SINE/Alu	1	299	(13)	1674099
615	19.9	8.8	3.3	chr17	74408422	74408677	(8848764)	+	MLT1F	LTR/ERVL-MaLR	227	532	(17)	1674098
4073	14.7	4.6	2.1	chr17	75983539	75984239	(7273202)	C	LTR8A	LTR/ERV1	(0)	727	9	1677161
2208	26.9	10.8	1.9	chr17	76168029	76168966	(7088475)	C	HAL1	LINE/L1	(0)	2507	1476	1677489
2128	14.2	0.7	0.3	chr17	77273300	77273580	(5983861)	+	AluSq2	SINE/Alu	1	280	(33)	1679773
40	0.0	0.0	0.0	chr17	77273581	77273614	(5983827)	+	(CA)n	Simple_repeat	1	34	(0)	1679774
2128	14.2	0.7	0.3	chr17	77273615	77273641	(5983800)	+	AluSq2	SINE/Alu	284	310	(3)	1679773
719	26.8	10.7	10.4	chr17	77273642	77273843	(5983598)	+	MLT1E1	LTR/ERVL-MaLR	430	653	(1)	1679770
239	30.0	2.8	0.0	chr17	77274121	77274190	(5983251)	C	MLT1F2	LTR/ERVL-MaLR	(485)	75	4	1679775
5145	9.8	0.0	0.3	chr17	77516200	77516938	(5740503)	C	L1PREC2	LINE/L1	(0)	6160	5424	1680165
2165	19.5	10.2	3.3	chr17	77516939	77517384	(5740057)	C	MLT1F	LTR/ERVL-MaLR	(57)	491	1	1680164
226	13.5	0.0	0.0	chr17	78131260	78131296	(5126145)	C	MIR1_Amn	SINE/MIR	(71)	159	123	1681245
187	31.8	10.1	4.5	chr17	78131268	78131379	(5126062)	C	MIRb	SINE/MIR	(116)	152	34	1681246
2067	20.7	12.4	0.6	chr17	78305788	78306269	(4951172)	+	MLT1F	LTR/ERVL-MaLR	1	547	(1)	1681609
1795	15.4	1.3	7.9	chr17	78306457	78306786	(4950655)	+	AluJr	SINE/Alu	1	308	(4)	1681611
999	26.4	7.1	13.4	chr17	78306787	78307222	(4950219)	C	MLT1E1A	LTR/ERVL-MaLR	(93)	587	55	1681610
1741	20.4	10.5	1.4	chr17	79492244	79492734	(3764707)	+	MLT1F	LTR/ERVL-MaLR	1	541	(7)	1683493
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
2213	11.1	1.0	0.0	chr17	82586620	82586916	(670525)	+	AluSp	SINE/Alu	1	300	(13)	1687926
16	11.3	5.0	2.4	chr17	83195241	83195280	(62161)	+	(GCTGG)n	Simple_repeat	1	42	(0)	1688657
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
2637	18.6	10.0	0.6	chr18	345770	346268	(80027017)	+	MLT1F1	LTR/ERVL-MaLR	19	569	(0)	1689651
564	38.1	11.5	1.1	chr18	3269005	3269725	(77103560)	C	L2	LINE/L2	(354)	3065	2260	1694064
634	19.4	4.6	0.0	chr18	7210229	7210350	(73162935)	C	Arthur1B	DNA/hAT-Tip100	(523)	702	575	1699721
1176	26.2	6.7	9.2	chr18	7210351	7210686	(73162599)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	214	1699722
1439	16.5	7.3	6.1	chr18	7210687	7210784	(73162501)	+	AluJr4	SINE/Alu	1	116	(196)	1699723
2407	17.7	7.2	4.5	chr18	8996764	8997179	(71376106)	+	MLT1F1	LTR/ERVL-MaLR	140	568	(1)	1702232
506	26.4	4.2	6.5	chr18	8997203	8997449	(71375836)	C	L1M5	LINE/L1	(518)	5606	5366	1702235
1178	16.8	14.1	2.8	chr18	9864762	9865049	(70508236)	C	MLT1F	LTR/ERVL-MaLR	(8)	540	215	1703769
917	23.1	30.2	2.3	chr18	11441116	11441554	(68931731)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	7	1705842
37	23.7	1.1	8.9	chr18	11981285	11981472	(68391813)	+	G-rich	Low_complexity	1	190	(0)	1706731
1257	25.1	7.7	3.0	chr18	13717859	13718227	(66655058)	+	MLT1E1A	LTR/ERVL-MaLR	285	672	(8)	1709416
1533	22.4	8.8	7.5	chr18	23592507	23592533	(56780752)	C	L1ME3	LINE/L1	(64)	6098	6082	1716487
2217	16.8	9.7	2.0	chr18	23592534	23592757	(56780528)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	302	1716489
2365	9.4	0.0	0.0	chr18	23592758	23593056	(56780229)	+	AluSz	SINE/Alu	2	300	(12)	1716490
35	6.7	3.0	2.9	chr18	26548249	26548314	(53824971)	+	(CTC)n	Simple_repeat	1	68	(0)	1721097
23	6.3	0.0	0.0	chr18	26548342	26548374	(53824911)	+	(CTC)n	Simple_repeat	1	33	(0)	1721097
1580	23.0	10.0	7.5	chr18	26761606	26762140	(53611145)	+	MLT1F2	LTR/ERVL-MaLR	11	560	(0)	1721486
1744	22.9	7.2	8.9	chr18	27051438	27051800	(53321485)	+	MLT1F	LTR/ERVL-MaLR	173	518	(30)	1721885
233	31.8	10.8	0.0	chr18	27051876	27051982	(53321303)	+	MIRb	SINE/MIR	101	220	(48)	1721887
1058	25.4	5.6	3.0	chr18	27601293	27601588	(52771697)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	377	1722631
1376	13.2	1.0	0.0	chr18	27601594	27601797	(52771488)	+	MLT2B4	LTR/ERVL	1	206	(350)	1722632
879	26.3	9.1	9.8	chr18	28289928	28290491	(52082794)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	1723556
808	27.4	9.4	6.9	chr18	31053555	31054083	(49319202)	C	MLT1E1A	LTR/ERVL-MaLR	(51)	629	25	1727145
200	37.2	1.1	4.4	chr18	32391183	32391272	(47982013)	C	L2a	LINE/L2	(365)	3061	2975	1729295
1390	23.1	12.6	3.9	chr18	34847396	34847887	(45525398)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	28	1732498
661	26.7	9.9	2.7	chr18	35535101	35535179	(44838106)	+	L1MD2	LINE/L1	5878	5958	(401)	1733458
1998	22.6	14.0	7.0	chr18	35535180	35535808	(44837477)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	1	1733459
2002	15.5	11.2	0.8	chr18	35645979	35646361	(44726924)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1733629
1912	20.3	10.3	1.8	chr18	35646362	35646711	(44726574)	C	MLT1F1	LTR/ERVL-MaLR	(110)	459	70	1733628
3016	19.2	6.5	1.2	chr18	35971355	35972182	(44401103)	+	L1MB5	LINE/L1	5258	6174	(0)	1734073
1556	21.3	6.4	0.0	chr18	45607627	45607950	(34765335)	C	MLT1F	LTR/ERVL-MaLR	(20)	528	183	1747176
782	26.7	9.2	1.2	chr18	48365061	48365318	(32007967)	C	L1ME4b	LINE/L1	(287)	605	325	1751779
434	26.4	6.4	6.4	chr18	48365320	48365521	(32007764)	+	MLT1E1	LTR/ERVL-MaLR	40	241	(319)	1751781
890	22.5	2.4	9.6	chr18	48365522	48365791	(32007494)	+	MLT1E1	LTR/ERVL-MaLR	405	654	(0)	1751781
1923	23.4	7.1	9.6	chr18	48726291	48726853	(31646432)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	1	1752359
3218	7.9	3.4	0.5	chr18	50200664	50201094	(30172191)	+	MLT2A1	LTR/ERVL	1	444	(0)	1754764
1869	26.3	5.4	5.8	chr18	50201095	50201305	(30171980)	+	MLT1F2	LTR/ERVL-MaLR	370	560	(0)	1754763
2018	22.1	3.9	3.9	chr18	50613063	50613642	(29759643)	+	MLT1E1A	LTR/ERVL-MaLR	1	680	(0)	1755424
1417	24.1	10.3	3.1	chr18	50979183	50979692	(29393593)	C	MLT1F2	LTR/ERVL-MaLR	(9)	551	1	1756141
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
2514	19.6	4.5	6.5	chr18	57174804	57175371	(23197914)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	5	1765169
1753	20.9	6.3	7.1	chr18	57741241	57741703	(22631582)	+	MLT1F2	LTR/ERVL-MaLR	102	560	(0)	1766085
2255	12.3	0.0	0.0	chr18	57741869	57742169	(22631116)	C	AluSz	SINE/Alu	(11)	301	1	1766089
742	24.5	0.0	0.0	chr18	58054471	58054613	(22318672)	+	FRAM	SINE/Alu	20	162	(14)	1766716
297	25.0	4.0	10.4	chr18	58580593	58580726	(21792559)	C	Charlie17a	DNA/hAT-Charlie	(3)	214	90	1767472
1831	25.2	5.8	7.4	chr18	59912943	59913485	(20459800)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	27	1769771
1817	19.6	5.3	3.3	chr18	74492151	74492572	(5880713)	C	MLT1E	LTR/ERVL-MaLR	(0)	653	223	1789961
1608	22.1	18.4	0.7	chr18	75083132	75083595	(5289690)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	5	1790607
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
799	17.7	4.3	1.9	chr18	79678792	79678949	(694336)	C	AluJo	SINE/Alu	(121)	191	30	1795686
12	15.3	3.5	0.0	chr19	461976	462004	(58155612)	+	G-rich	Low_complexity	1	30	(0)	1796955
12	15.7	2.6	5.0	chr19	462094	462132	(58155484)	+	(CGCGGT)n	Simple_repeat	1	40	(0)	1796956
354	14.6	0.0	1.8	chr19	726812	726866	(57890750)	C	AluJo	SINE/Alu	(25)	287	234	1797467
155	21.8	2.7	1.9	chr19	727146	727555	(57890061)	+	(CCCTGA)n	Simple_repeat	1	421	(0)	1797468
2155	10.0	0.3	2.0	chr19	1182409	1182707	(57434909)	+	AluSx1	SINE/Alu	1	294	(18)	1798343
11	18.4	6.7	2.1	chr19	1445279	1445323	(57172293)	+	(CCGCCCA)n	Simple_repeat	1	48	(0)	1798790
14	18.1	1.7	8.3	chr19	1753517	1753575	(56864041)	+	(GCCGC)n	Simple_repeat	1	60	(0)	1799457
210	30.0	4.1	0.0	chr19	1768480	1768549	(56849067)	C	MIR3	SINE/MIR	(68)	140	68	1799478
196	34.1	5.5	5.5	chr19	2306615	2306760	(56310856)	C	MIR1_Amn	SINE/MIR	(50)	180	35	1800513
1844	13.7	0.3	6.7	chr19	2369425	2369738	(56247878)	C	AluJo	SINE/Alu	(18)	294	1	1800625
702	22.5	0.6	4.8	chr19	2369749	2369916	(56247700)	C	MLT1E1A	LTR/ERVL-MaLR	(26)	654	494	1800626
1981	12.2	1.4	0.7	chr19	2369934	2370212	(56247404)	+	AluSx1	SINE/Alu	9	289	(23)	1800627
2123	12.7	0.7	1.7	chr19	2380316	2380615	(56237001)	+	AluSz	SINE/Alu	3	299	(13)	1800659
922	17.5	1.6	0.5	chr19	2380636	2380819	(56236797)	+	MLT1E1A	LTR/ERVL-MaLR	495	680	(0)	1800660
263	39.5	7.5	6.5	chr19	2380850	2381204	(56236412)	+	L2c	LINE/L2	3026	3384	(3)	1800661
2352	7.6	0.3	0.0	chr19	2549294	2549582	(56068034)	C	AluSg7	SINE/Alu	(13)	296	7	1801071
1325	24.8	1.9	5.1	chr19	2577133	2577523	(56040093)	C	MLT1E1A	LTR/ERVL-MaLR	(16)	664	287	1801144
1967	22.1	8.6	5.2	chr19	2630262	2630878	(55986738)	+	MLT1E1A	LTR/ERVL-MaLR	41	680	(0)	1801288
1926	15.4	1.0	5.2	chr19	2661375	2661699	(55955917)	+	AluSx1	SINE/Alu	1	311	(1)	1801371
16	14.5	0.0	0.0	chr19	2661700	2661730	(55955886)	+	(GGAA)n	Simple_repeat	1	31	(0)	1801372
538	17.6	5.3	0.0	chr19	2661749	2661873	(55955743)	+	MLT1F1	LTR/ERVL-MaLR	288	419	(150)	1801367
3016	20.0	10.0	3.3	chr19	2661916	2661977	(55955639)	C	MER21B	LTR/ERVL	(3)	865	812	1801373
2367	10.9	0.0	0.0	chr19	2661978	2662280	(55955336)	+	AluSx1	SINE/Alu	1	303	(9)	1801374
15	5.5	0.0	0.0	chr19	2715257	2715275	(55902341)	+	(TC)n	Simple_repeat	1	19	(0)	1801518
1174	25.2	6.3	3.7	chr19	2715362	2715715	(55901901)	+	MLT1E1A	LTR/ERVL-MaLR	317	680	(0)	1801519
1371	24.9	11.8	9.5	chr19	2736180	2736725	(55880891)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	1801552
979	23.0	6.9	15.7	chr19	2741026	2741374	(55876242)	+	MLT1F2	LTR/ERVL-MaLR	99	437	(123)	1801565
2114	17.0	0.0	0.3	chr19	2741375	2741686	(55875930)	+	AluSz6	SINE/Alu	1	311	(1)	1801566
886	13.5	0.0	0.8	chr19	3042986	3043118	(55574498)	C	FLAM_C	SINE/Alu	(10)	133	2	1802245
1094	15.7	24.7	0.0	chr19	3043125	3043353	(55574263)	C	AluJr	SINE/Alu	(8)	304	1	1802246
2175	20.4	7.5	1.1	chr19	3108648	3109168	(55508448)	C	MLT1F1	LTR/ERVL-MaLR	(6)	563	7	1802427
413	27.7	0.0	0.0	chr19	3284670	3284770	(55332846)	+	MIRc	SINE/MIR	37	137	(131)	1802828
1205	21.1	10.0	3.7	chr19	3302712	3303065	(55314551)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	170	1802878
1785	14.4	4.4	0.7	chr19	3303086	3303370	(55314246)	C	AluJo	SINE/Alu	(12)	300	5	1802879
241	29.7	13.9	0.6	chr19	3487208	3487363	(55130253)	C	L2a	LINE/L2	(1605)	1814	1635	1803392
704	17.6	0.7	2.7	chr19	3487384	3487529	(55130087)	+	MLT1F	LTR/ERVL-MaLR	321	463	(85)	1803402
2302	11.5	0.0	0.7	chr19	3487563	3487867	(55129749)	C	AluSq2	SINE/Alu	(10)	303	1	1803403
1278	24.6	12.6	2.0	chr19	3497209	3497626	(55119990)	+	MLT1F	LTR/ERVL-MaLR	33	510	(38)	1803429
1856	16.4	0.3	2.0	chr19	3497627	3497930	(55119686)	C	AluJb	SINE/Alu	(13)	299	1	1803430
2308	11.1	0.0	0.0	chr19	3682092	3682389	(54935227)	+	AluSx	SINE/Alu	1	298	(14)	1803768
1799	16.4	1.3	3.1	chr19	3682399	3682716	(54934900)	+	AluJo	SINE/Alu	1	312	(0)	1803769
894	14.8	1.8	0.0	chr19	3682724	3682885	(54934731)	+	MLT1F	LTR/ERVL-MaLR	320	484	(64)	1803770
290	28.3	18.2	1.2	chr19	3682929	3683264	(54934352)	+	L2b	LINE/L2	2940	3345	(30)	1803771
2613	19.1	9.5	0.0	chr19	4256527	4257038	(54360578)	C	MLT1F1	LTR/ERVL-MaLR	(1)	568	3	1805180
2234	11.4	0.0	0.7	chr19	4271817	4272122	(54345494)	+	AluSz	SINE/Alu	1	304	(8)	1805225
740	26.4	13.1	4.8	chr19	4272123	4272261	(54345355)	C	MLT1F2	LTR/ERVL-MaLR	(162)	398	262	1805224
412	17.3	0.0	0.0	chr19	4272275	4272349	(54345267)	C	MSTD	LTR/ERVL-MaLR	(0)	396	322	1805226
2119	11.6	0.3	1.4	chr19	4272350	4272641	(54344975)	+	AluSx1	SINE/Alu	1	289	(23)	1805227
1880	25.0	5.0	9.8	chr19	5481928	5482517	(53135099)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	1808115
95	19.5	2.3	1.4	chr19	5501989	5502202	(53115414)	+	A-rich	Low_complexity	1	219	(0)	1808169
1202	19.0	5.2	0.0	chr19	5502203	5502439	(53115177)	+	MLT1F1	LTR/ERVL-MaLR	320	569	(0)	1808167
915	27.2	7.0	1.8	chr19	5502440	5502709	(53114907)	C	MLT1I	LTR/ERVL-MaLR	(45)	366	81	1808170
247	25.4	12.9	1.6	chr19	6118888	6119011	(52498605)	C	MIR	SINE/MIR	(3)	259	120	1809458
1124	16.8	3.0	1.0	chr19	6119013	6119210	(52498406)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	347	1809459
146	20.8	2.3	4.9	chr19	6119220	6119486	(52498130)	+	(CTTC)n	Simple_repeat	1	258	(0)	1809460
1617	22.3	5.4	0.8	chr19	6148002	6148354	(52469262)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	179	1809541
1875	17.8	1.0	0.3	chr19	6148364	6148667	(52468949)	+	AluJb	SINE/Alu	1	306	(6)	1809542
17	28.1	0.0	0.0	chr19	6261642	6261693	(52355923)	+	A-rich	Low_complexity	1	52	(0)	1809770
329	22.2	11.3	11.3	chr19	6879135	6879180	(51738436)	C	MIR	SINE/MIR	(101)	161	122	1811442
1892	21.8	12.1	6.0	chr19	6879190	6879604	(51738012)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	97	1811444
1880	16.3	0.7	0.3	chr19	6879605	6879893	(51737723)	+	AluJo	SINE/Alu	3	292	(20)	1811445
1986	24.8	3.3	4.5	chr19	6983520	6984068	(51633548)	+	MLT1F2	LTR/ERVL-MaLR	19	560	(0)	1811730
188	27.3	13.0	0.8	chr19	6984069	6984189	(51633427)	C	MIRc	SINE/MIR	(100)	162	36	1811727
82	30.6	1.8	0.3	chr19	7197505	7197782	(51419834)	+	(GT)n	Simple_repeat	1	283	(0)	1812250
41	12.2	0.0	0.0	chr19	7197803	7197864	(51419752)	+	(AG)n	Simple_repeat	1	62	(0)	1812251
40	22.6	1.3	0.7	chr19	7197919	7198077	(51419539)	+	(GT)n	Simple_repeat	1	160	(0)	1812252
1067	30.5	6.8	0.4	chr19	7239348	7239831	(51377785)	+	L1ME3Cz	LINE/L1	111	627	(370)	1812368
1706	22.9	9.8	6.5	chr19	7817726	7818263	(50799353)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	1	1813797
1006	7.5	1.5	0.0	chr19	10960158	10960291	(47657325)	C	AluSp	SINE/Alu	(177)	136	1	1821122
274	25.7	0.8	1.7	chr19	10960295	10960413	(47657203)	+	L2a	LINE/L2	3254	3387	(0)	1821120
16	8.5	0.0	0.0	chr19	10960669	10960693	(47656923)	+	(CCG)n	Simple_repeat	1	25	(0)	1821123
36	28.3	3.0	4.8	chr19	10960847	10961046	(47656570)	+	G-rich	Low_complexity	1	206	(0)	1821124
2448	9.7	0.0	0.3	chr19	11344847	11345155	(47272461)	C	AluSx3	SINE/Alu	(3)	308	1	1822106
17	23.6	0.0	5.0	chr19	11479502	11479561	(47138055)	+	G-rich	Low_complexity	1	60	(0)	1822439
15	17.4	2.4	2.4	chr19	11479758	11479798	(47137818)	+	G-rich	Low_complexity	1	42	(0)	1822440
2132	11.7	1.7	0.0	chr19	14237882	14238172	(44379444)	C	AluSg	SINE/Alu	(13)	297	2	1828912
1518	21.1	7.3	6.8	chr19	14238173	14238396	(44379220)	+	MLT1F2	LTR/ERVL-MaLR	193	510	(143)	1828911
1040	14.7	0.0	0.7	chr19	14238467	14238616	(44379000)	C	AluJo	SINE/Alu	(30)	282	134	1828913
1294	13.0	1.5	0.0	chr19	15137435	15137626	(43479990)	+	AluSx	SINE/Alu	100	294	(18)	1831201
1129	21.6	15.3	8.8	chr19	15137630	15138095	(43479521)	C	MLT1F2	LTR/ERVL-MaLR	(58)	502	1	1831202
1380	24.1	11.1	1.5	chr19	15416268	15416675	(43200941)	+	MLT1F	LTR/ERVL-MaLR	34	485	(63)	1831766
2273	10.9	1.3	0.3	chr19	16710392	16710693	(41906923)	+	AluSq2	SINE/Alu	2	306	(7)	1834539
1693	19.3	13.5	2.7	chr19	16710694	16710984	(41906632)	C	MLT1F1	LTR/ERVL-MaLR	(160)	409	61	1834538
2160	9.8	1.0	3.6	chr19	16886714	16887019	(41730597)	C	AluSp	SINE/Alu	(14)	299	2	1835015
2335	12.7	0.0	0.0	chr19	16918923	16919230	(41698386)	+	AluSx1	SINE/Alu	3	310	(2)	1835085
1939	20.3	7.9	3.0	chr19	16919231	16919661	(41697955)	+	MLT1F1	LTR/ERVL-MaLR	116	569	(0)	1835086
2208	12.4	0.0	0.3	chr19	17765392	17765698	(40851918)	+	AluJb	SINE/Alu	3	308	(4)	1837223
12	11.9	0.0	6.5	chr19	17765781	17765811	(40851805)	+	GA-rich	Low_complexity	1	31	(0)	1837224
2539	5.0	0.0	0.7	chr19	17765881	17766177	(40851439)	C	AluY	SINE/Alu	(4)	307	13	1837225
2002	8.0	4.3	1.5	chr19	18057886	18058159	(40559457)	+	AluSq2	SINE/Alu	14	295	(18)	1837970
2085	11.7	0.0	0.3	chr19	18245183	18245464	(40372152)	C	AluSx1	SINE/Alu	(31)	281	1	1838457
599	31.5	14.4	0.3	chr19	18245465	18245792	(40371824)	+	L2b	LINE/L2	2992	3373	(2)	1838458
13	15.9	5.7	0.0	chr19	18542984	18543018	(40074598)	+	(CCA)n	Simple_repeat	1	37	(0)	1839064
948	17.0	0.0	2.0	chr19	18901648	18901800	(39715816)	+	AluJo	SINE/Alu	2	151	(161)	1839796
461	25.9	7.9	2.2	chr19	31434972	31435149	(27182467)	C	L1ME3B	LINE/L1	(41)	6132	5944	1853208
1470	24.9	4.9	0.8	chr19	31435152	31435623	(27181993)	C	MLT1F	LTR/ERVL-MaLR	(45)	503	1	1853209
2338	25.0	2.5	0.9	chr19	32517611	32518156	(26099460)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	6	1854930
240	35.8	9.3	0.3	chr19	33728830	33729132	(24888484)	+	LTR88b	LTR/Gypsy?	138	470	(367)	1857228
1599	22.4	4.5	1.2	chr19	33729188	33729590	(24888026)	C	MLT1F2	LTR/ERVL-MaLR	(143)	417	1	1857229
3805	15.7	0.7	1.1	chr19	33729626	33730232	(24887384)	C	LTR26D	LTR/ERV1	(0)	604	1	1857230
1218	22.9	6.7	9.7	chr19	34043311	34043823	(24573793)	+	MLT1E1	LTR/ERVL-MaLR	48	637	(17)	1857757
3091	20.5	2.5	1.2	chr19	34043824	34044419	(24573197)	C	MER77	LTR/ERVL	(0)	604	1	1857758
1505	25.9	3.8	10.3	chr19	35222922	35223514	(23394102)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	8	1859978
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
1756	23.3	7.2	6.3	chr19	36339339	36339893	(22277723)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	1862343
2262	18.2	10.6	0.0	chr19	36922051	36922533	(21695083)	C	MLT1F	LTR/ERVL-MaLR	(8)	540	1	1863521
27	29.8	0.0	4.0	chr19	37595201	37595301	(21022315)	+	(TG)n	Simple_repeat	1	101	(0)	1864717
233	20.9	0.0	0.0	chr19	37595620	37595662	(21021954)	+	MIR3	SINE/MIR	111	153	(55)	1864718
853	22.3	1.0	2.8	chr19	37595681	37595892	(21021724)	+	MER3	DNA/hAT-Charlie	1	208	(1)	1864719
15	8.6	7.7	2.4	chr19	39342130	39342180	(19275436)	+	(CGCCC)n	Simple_repeat	1	53	(0)	1868895
4398	13.5	2.8	3.6	chr19	40770942	40771710	(17845906)	C	LTR12D	LTR/ERV1	(123)	1131	370	1871920
713	22.9	3.5	4.5	chr19	40771711	40771911	(17845705)	+	MLT1F2	LTR/ERVL-MaLR	247	445	(115)	1871921
1550	18.8	4.1	3.8	chr19	40771933	40772225	(17845391)	C	AluJo	SINE/Alu	(12)	300	7	1871922
2001	13.8	1.4	0.0	chr19	40830241	40830523	(17787093)	C	AluSz6	SINE/Alu	(11)	301	15	1872041
320	26.3	8.3	5.0	chr19	40830534	40830673	(17786943)	+	LTR33	LTR/ERVL	1	145	(370)	1872042
13	15.4	0.0	3.2	chr19	42284093	42284123	(16333493)	+	(GCAC)n	Simple_repeat	1	31	(0)	1874957
17	23.3	0.0	0.0	chr19	42284254	42284298	(16333318)	+	GA-rich	Low_complexity	1	45	(0)	1874958
2014	19.7	11.2	7.9	chr19	44506406	44506939	(14110677)	+	MLT1F2	LTR/ERVL-MaLR	1	554	(6)	1878841
201	29.9	4.4	4.4	chr19	44506945	44507035	(14110581)	+	L2a	LINE/L2	3028	3118	(308)	1878838
12	12.0	0.0	6.5	chr19	44745521	44745551	(13872065)	+	(CTCC)n	Simple_repeat	1	31	(0)	1879515
12	21.2	2.1	4.2	chr19	45001692	45001738	(13615878)	+	G-rich	Low_complexity	1	48	(0)	1880193
192	32.1	0.0	0.0	chr19	45822400	45822455	(12795161)	+	L3b	LINE/CR1	4971	5026	(206)	1882331
283	36.0	5.4	2.8	chr19	46633644	46633823	(11983793)	+	MIRb	SINE/MIR	9	193	(75)	1884156
15	9.7	0.0	0.0	chr19	47231930	47231951	(11385665)	+	(AC)n	Simple_repeat	1	22	(0)	1885602
2295	10.5	0.7	0.0	chr19	47232071	47232374	(11385242)	+	AluSq2	SINE/Alu	2	307	(6)	1885603
12	11.1	0.0	8.6	chr19	47239535	47239569	(11378047)	+	G-rich	Low_complexity	1	35	(0)	1885626
2371	17.6	8.2	0.6	chr19	47674474	47674980	(10942636)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	21	1886745
2351	7.6	0.7	0.3	chr19	48415090	48415393	(10202223)	+	AluSx1	SINE/Alu	2	306	(6)	1888704
2354	8.0	0.7	0.3	chr19	48528750	48529051	(10088565)	+	AluSp	SINE/Alu	2	304	(9)	1888963
1710	24.7	13.7	1.5	chr19	48529052	48529488	(10088128)	C	MLT1F	LTR/ERVL-MaLR	(40)	508	2	1888962
2052	12.5	0.0	3.5	chr19	48778774	48779084	(9838532)	+	AluSz	SINE/Alu	1	300	(12)	1889581
1359	24.9	8.2	7.1	chr19	48779085	48779211	(9838405)	+	MLT1F	LTR/ERVL-MaLR	334	472	(76)	1889578
928	12.7	14.4	0.7	chr19	48779213	48779320	(9838296)	+	AluSx1	SINE/Alu	1	133	(179)	1889582
1088	18.9	15.8	0.7	chr19	49757079	49757413	(8860203)	+	MLT1F	LTR/ERVL-MaLR	119	558	(11)	1891866
458	21.4	2.1	4.2	chr19	49757480	49757629	(8859987)	+	MIR	SINE/MIR	36	177	(91)	1891868
879	28.7	19.2	0.6	chr19	50384708	50385389	(8232227)	C	L2a	LINE/L2	(24)	3402	2482	1893387
2343	10.4	0.3	0.3	chr19	50385520	50385828	(8231788)	C	AluSx1	SINE/Alu	(3)	309	1	1893388
1995	23.2	3.8	7.5	chr19	51679213	51679789	(6937827)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	4	1896033
1485	23.6	10.9	5.3	chr19	54053278	54053804	(4563812)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	1900936
205	27.1	4.8	8.5	chr19	54053815	54053967	(4563649)	+	L2a	LINE/L2	3222	3383	(43)	1900935
2186	10.0	1.6	2.2	chr19	55211932	55212242	(3405374)	+	AluSx	SINE/Alu	1	309	(3)	1903243
436	21.4	0.0	0.0	chr19	55212344	55212432	(3405184)	+	MLT1F1	LTR/ERVL-MaLR	348	436	(133)	1903244
891	24.3	4.1	0.0	chr19	55560568	55560756	(3056860)	+	MIR	SINE/MIR	6	202	(60)	1904013
2135	22.6	4.7	9.9	chr19	55560757	55561344	(3056272)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	5	1904014
367	35.1	13.8	5.0	chr19	55595341	55595643	(3021973)	+	L2b	LINE/L2	2991	3324	(51)	1904113
331	36.6	6.5	7.5	chr19	55595633	55596084	(3021532)	+	L2b	LINE/L2	2921	3367	(8)	1904114
285	33.9	8.4	1.1	chr19	56064425	56064600	(2553016)	+	MIRb	SINE/MIR	45	234	(34)	1905024
897	25.6	9.7	6.2	chr19	56064626	56065116	(2552500)	C	MLT1E1	LTR/ERVL-MaLR	(0)	654	31	1905025
11	27.4	1.6	4.8	chr19	56567606	56567667	(2049949)	+	(GCGTGC)n	Simple_repeat	1	63	(0)	1906004
1522	23.3	3.7	6.0	chr2	811161	811713	(241381816)	C	MLT1E1A	LTR/ERVL-MaLR	(2)	678	51	1911610
843	27.1	2.6	1.3	chr2	2760513	2760744	(239432785)	C	MLT1E2	LTR/ERVL-MaLR	(9)	618	384	1913638
250	30.8	5.0	2.8	chr2	2760845	2761021	(239432508)	C	MLT1E2	LTR/ERVL-MaLR	(379)	181	1	1913638
1445	23.3	2.3	1.2	chr2	3653906	3654319	(238539210)	C	MLT1F	LTR/ERVL-MaLR	(11)	643	15	1914784
1806	14.3	0.3	7.9	chr2	8838180	8838508	(233355021)	+	AluJo	SINE/Alu	5	308	(4)	1921950
2085	21.0	11.4	3.9	chr2	10335085	10335599	(231857930)	+	MLT1F2	LTR/ERVL-MaLR	1	559	(1)	1924594
1451	28.2	5.7	8.1	chr2	10335600	10335952	(231857577)	C	L1ME3Cz	LINE/L1	(582)	415	69	1924591
328	37.2	3.5	1.8	chr2	11627385	11627551	(230565978)	C	L2c	LINE/L2	(8)	3379	3210	1926991
1535	23.2	4.6	9.4	chr2	12705256	12705689	(229487840)	+	MLT1F2	LTR/ERVL-MaLR	149	560	(0)	1928743
1797	23.9	7.0	4.8	chr2	15672016	15672494	(226521035)	+	MLT1F	LTR/ERVL-MaLR	39	539	(9)	1933087
246	14.3	0.0	2.3	chr2	19667269	19667311	(222526218)	+	MER126	DNA	1	42	(407)	1939127
1368	20.3	7.2	2.3	chr2	20545973	20546424	(221647105)	+	MLT1F1	LTR/ERVL-MaLR	10	569	(0)	1940548
2413	11.2	0.0	0.0	chr2	20581338	20581649	(221611880)	C	AluSx	SINE/Alu	(0)	312	1	1940596
1762	19.8	9.3	4.8	chr2	20581650	20582102	(221611427)	C	MLT1E1A	LTR/ERVL-MaLR	(56)	624	137	1940595
1562	23.8	4.2	6.7	chr2	20760354	20760948	(221432581)	C	MLT1E1A	LTR/ERVL-MaLR	(3)	677	1	1940821
1026	27.1	9.9	4.2	chr2	25818793	25819315	(216374214)	+	MLT1F2	LTR/ERVL-MaLR	1	556	(4)	1948625
14	31.3	0.0	0.0	chr2	25982424	25982474	(216211055)	+	(GCC)n	Simple_repeat	1	51	(0)	1949040
19	19.9	3.0	5.1	chr2	25982575	25982647	(216210882)	+	G-rich	Low_complexity	1	71	(0)	1949041
735	19.9	0.7	2.0	chr2	32279883	32280031	(209913498)	C	AluJb	SINE/Alu	(0)	312	166	1959945
1886	8.7	0.0	1.2	chr2	32280136	32280376	(209913153)	C	AluY	SINE/Alu	(20)	291	54	1959946
1281	24.0	10.7	11.5	chr2	32833680	32834244	(209359285)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	1961041
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
2480	21.5	8.8	1.3	chr2	33024780	33025303	(209168226)	C	MLT1F1	LTR/ERVL-MaLR	(2)	567	1	1961367
677	22.2	7.0	10.4	chr2	36771122	36771248	(205422281)	+	L1M5	LINE/L1	5279	5384	(740)	1966500
354	20.8	20.7	0.8	chr2	37647620	37647750	(204545779)	+	MLT1E1	LTR/ERVL-MaLR	1	164	(396)	1968040
669	22.3	9.8	4.5	chr2	37647848	37648068	(204545461)	+	MLT1E1	LTR/ERVL-MaLR	421	654	(0)	1968040
1213	28.0	6.8	10.4	chr2	37820550	37821118	(204372411)	+	MLT1F2	LTR/ERVL-MaLR	14	560	(0)	1968290
16	21.7	3.1	4.5	chr2	38377423	38377486	(203816043)	+	(CGCC)n	Simple_repeat	1	66	(0)	1969098
1797	20.5	6.1	0.8	chr2	42972683	42973071	(199220458)	C	MLT1F	LTR/ERVL-MaLR	(8)	540	130	1976646
2200	12.1	0.0	2.9	chr2	42973077	42973217	(199220312)	+	AluSx	SINE/Alu	1	135	(177)	1976647
2751	19.5	1.6	0.6	chr2	43007873	43008377	(199185152)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	39	1976702
11	13.0	8.8	0.0	chr2	45650165	45650198	(196543331)	+	(CGCCGGC)n	Simple_repeat	1	37	(0)	1981028
2867	19.3	4.6	1.1	chr2	46241161	46241709	(195951820)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	1981954
24	19.7	1.2	6.9	chr2	47175810	47175896	(195017633)	+	(CGCC)n	Simple_repeat	1	82	(0)	1983480
2207	11.7	0.0	0.0	chr2	47372493	47372790	(194820739)	+	AluSx4	SINE/Alu	2	299	(11)	1983932
2231	12.9	0.3	0.0	chr2	47372924	47373234	(194820295)	+	AluJb	SINE/Alu	1	312	(0)	1983933
13	17.9	7.4	3.5	chr2	48314247	48314300	(193879229)	+	(GCC)n	Simple_repeat	1	58	(0)	1985746
1405	27.5	6.2	0.7	chr2	48613423	48613836	(193579693)	C	MLT1F1	LTR/ERVL-MaLR	(4)	565	128	1986306
451	19.8	0.0	0.0	chr2	54895437	54895517	(187298012)	+	MER96	DNA/hAT-Tip100	1	81	(94)	1994993
1655	20.2	6.7	5.0	chr2	54895521	54896059	(187297470)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	41	1994994
1744	21.6	6.9	1.3	chr2	55767435	55767899	(186425630)	+	MLT1F	LTR/ERVL-MaLR	56	548	(0)	1996555
1427	29.0	3.3	3.1	chr2	59142071	59142438	(183051091)	+	MLT1F1	LTR/ERVL-MaLR	196	569	(0)	2000726
2026	19.6	9.1	7.8	chr2	62361632	62362183	(179831346)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	2006375
1516	26.9	8.6	8.2	chr2	62362184	62362600	(179830929)	C	MER115	DNA/hAT-Tip100	(222)	471	26	2006373
1149	25.0	8.6	3.0	chr2	64023640	64024010	(178169519)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	287	2008691
241	26.1	11.1	0.0	chr2	64024042	64024129	(178169400)	C	MLT1E1A	LTR/ERVL-MaLR	(411)	149	51	2008691
12	9.6	8.6	2.6	chr2	64454608	64454642	(177738887)	+	(CGC)n	Simple_repeat	1	38	(0)	2009389
1881	20.8	15.3	3.2	chr2	64692308	64692803	(177500726)	C	MLT1F1	LTR/ERVL-MaLR	(2)	567	1	2009773
775	28.4	4.2	8.6	chr2	65047790	65047844	(177145685)	C	L1MC4	LINE/L1	(15)	8027	7965	2010477
1784	22.4	10.9	8.1	chr2	65047845	65048387	(177145142)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	2010478
1736	24.1	4.0	1.6	chr2	69303833	69304219	(172889310)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	164	2016829
2204	12.6	0.0	3.1	chr2	69778816	69779133	(172414396)	+	AluSz	SINE/Alu	1	308	(4)	2017744
2348	17.1	11.9	3.2	chr2	70481546	70482042	(171711487)	+	MLT1F	LTR/ERVL-MaLR	3	548	(0)	2019167
1297	22.1	10.3	3.0	chr2	71901122	71901247	(170292282)	+	LTR16A	LTR/ERVL	1	157	(294)	2021304
1728	22.4	16.7	0.8	chr2	71901248	71901725	(170291804)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	2021305
13	26.3	0.0	0.0	chr2	74654267	74654307	(167539222)	+	(GCCGA)n	Simple_repeat	1	41	(0)	2025740
16	13.8	0.0	8.3	chr2	74654533	74654580	(167538949)	+	(ACGCCC)n	Simple_repeat	1	48	(0)	2025741
1808	25.1	6.7	3.3	chr2	78571003	78571457	(163622072)	C	MLT1F1	LTR/ERVL-MaLR	(2)	567	82	2031090
100	0.0	3.9	0.0	chr2	80079814	80079915	(162113614)	+	(AAAAT)n	Simple_repeat	1	106	(0)	2033224
1147	23.3	7.4	0.2	chr2	80080179	80080598	(162112931)	+	L1M5	LINE/L1	4642	5123	(1023)	2033225
2576	19.4	0.4	5.6	chr2	85081211	85081653	(157111876)	C	MLT1F2-int	LTR/ERVL-MaLR	(1072)	417	1	2040059
1952	23.2	7.0	7.3	chr2	85081654	85082215	(157111314)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	2040059
2040	13.8	1.8	0.3	chr2	85959020	85959354	(156234175)	+	MER6A	DNA/TcMar-Tigger	218	557	(48)	2041822
1203	16.9	11.2	6.5	chr2	86198070	86198243	(155995286)	+	AluJr	SINE/Alu	112	294	(18)	2042223
1793	14.3	2.7	2.0	chr2	86198284	86198577	(155994952)	+	AluJr	SINE/Alu	1	296	(16)	2042225
2145	8.5	0.0	0.4	chr2	86198731	86199002	(155994527)	C	AluSc8	SINE/Alu	(39)	272	2	2042226
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
292	22.6	20.4	3.5	chr2	91445983	91446124	(150747405)	C	MER103C	DNA/hAT-Charlie	(70)	227	56	2048338
803	23.5	6.4	4.1	chr2	102925830	102926324	(139267205)	C	MLT1F2	LTR/ERVL-MaLR	(5)	555	4	2061716
1653	25.0	9.2	2.0	chr2	104730725	104731230	(137462299)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	1	2063895
1394	25.9	2.9	7.1	chr2	105727305	105727789	(136465740)	+	MLT1F2	LTR/ERVL-MaLR	117	569	(0)	2065401
1212	23.4	16.5	0.1	chr2	105888560	105888907	(136304622)	+	MLT1F1	LTR/ERVL-MaLR	1	413	(147)	2065612
2938	8.4	1.4	0.0	chr2	110213542	110213900	(131979629)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2071895
1469	21.0	5.4	4.3	chr2	110213901	110214296	(131979233)	+	MLT1E1A	LTR/ERVL-MaLR	170	658	(22)	2071894
4288	17.0	6.1	2.2	chr2	110214338	110215125	(131978404)	C	MER21B	LTR/ERVL	(28)	840	21	2071896
2359	24.1	1.9	0.2	chr2	110712409	110712941	(131480588)	+	MLT1F	LTR/ERVL-MaLR	3	544	(4)	2072602
1791	19.8	7.5	0.3	chr2	113056072	113056441	(129137088)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	150	2076146
1310	23.1	18.9	1.6	chr2	113769436	113769677	(128423852)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	310	2077290
1720	15.3	0.0	8.9	chr2	113769678	113770003	(128423526)	C	AluJr	SINE/Alu	(15)	297	1	2077291
1307	24.2	12.5	9.7	chr2	117968990	117969525	(124224004)	+	MLT1F2	LTR/ERVL-MaLR	3	555	(5)	2082970
2630	17.6	10.9	2.8	chr2	117969537	117970099	(124223430)	+	MER90a	LTR/ERV1	1	614	(0)	2082971
12	14.4	0.0	0.0	chr2	119705078	119705101	(122488428)	+	(AATG)n	Simple_repeat	1	24	(0)	2085799
1376	17.5	8.1	13.6	chr2	119705185	119705581	(122487948)	C	MLT1E1A	LTR/ERVL-MaLR	(10)	670	298	2085800
2456	19.5	7.9	4.0	chr2	128351578	128352123	(113841406)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	2099086
2091	23.1	5.5	6.5	chr2	128352124	128352615	(113840914)	+	L1ME3B	LINE/L1	5447	5931	(311)	2099082
2156	25.5	2.0	5.8	chr2	140169855	140170437	(102023092)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	2115817
1912	25.1	5.0	4.5	chr2	140761343	140761896	(101431633)	+	MLT1F2	LTR/ERVL-MaLR	1	557	(3)	2116529
1953	28.1	3.9	1.7	chr2	143202220	143202744	(98990785)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	24	2119771
744	26.0	9.9	9.2	chr2	144173218	144173598	(98019931)	+	MLT1F2	LTR/ERVL-MaLR	14	397	(163)	2121038
361	20.8	1.3	1.3	chr2	144173601	144173678	(98019851)	C	L1ME4a	LINE/L1	(5816)	584	507	2121031
1824	20.4	3.4	2.7	chr2	144173680	144174092	(98019437)	+	MSTB1	LTR/ERVL-MaLR	1	416	(16)	2121039
1768	12.0	0.4	0.0	chr2	146824387	146824628	(95368901)	+	AluSq	SINE/Alu	69	311	(2)	2124394
1140	22.1	6.1	20.3	chr2	146824629	146825087	(95368442)	C	MLT1F2	LTR/ERVL-MaLR	(110)	450	51	2124393
962	21.1	20.4	6.5	chr2	149367085	149367531	(92825998)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	36	2127980
414	29.3	4.9	5.3	chr2	149397140	149397384	(92796145)	C	MLT1H2	LTR/ERVL-MaLR	(23)	466	223	2128018
1204	21.1	6.3	4.7	chr2	151739251	151739637	(90453892)	+	MLT1E1A	LTR/ERVL-MaLR	287	680	(0)	2131274
12	22.8	1.7	6.8	chr2	153478574	153478631	(88714898)	+	G-rich	Low_complexity	1	59	(0)	2133770
14	16.9	3.0	0.0	chr2	153478867	153478899	(88714630)	+	(GGC)n	Simple_repeat	1	34	(0)	2133771
1663	22.7	17.4	2.5	chr2	158946839	158946936	(83246593)	+	MLT1F1	LTR/ERVL-MaLR	1	99	(470)	2140867
43	0.0	0.0	0.0	chr2	158946937	158946973	(83246556)	+	(GT)n	Simple_repeat	1	37	(0)	2140868
1663	22.7	17.4	2.5	chr2	158946974	158947353	(83246176)	+	MLT1F1	LTR/ERVL-MaLR	100	565	(4)	2140867
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
619	18.6	0.5	0.0	chr2	161281902	161282139	(80911390)	+	ACRO1	Satellite/acro	1	239	(5)	2144211
1494	22.5	3.8	6.5	chr2	165839806	165840398	(76353131)	+	MLT1E1A	LTR/ERVL-MaLR	26	680	(0)	2150217
836	28.4	16.7	2.9	chr2	166806419	166806897	(75386632)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	1	2151444
2141	17.6	9.2	3.1	chr2	168314058	168314567	(73878962)	C	MLT1F	LTR/ERVL-MaLR	(4)	544	1	2153378
2270	23.2	2.9	2.6	chr2	172300635	172301179	(69892350)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	2	2159944
2450	11.7	0.3	0.0	chr2	172695891	172696199	(69497330)	+	AluSq2	SINE/Alu	1	310	(3)	2160551
1251	19.2	6.0	13.6	chr2	172696200	172696381	(69497148)	+	MLT1E1A	LTR/ERVL-MaLR	488	651	(29)	2160550
2545	19.9	4.2	3.5	chr2	173274026	173274567	(68918962)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	1	2161386
1063	22.5	3.1	6.9	chr2	175826472	175826777	(66366752)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	267	2165282
21	7.7	0.0	0.0	chr2	175838397	175838424	(66355105)	+	(TG)n	Simple_repeat	1	28	(0)	2165299
288	28.3	10.2	10.6	chr2	175838498	175838734	(66354795)	+	Charlie8	DNA/hAT-Charlie	182	417	(2011)	2165300
12	17.3	6.1	3.9	chr2	177212813	177212861	(64980668)	+	(CGCCGT)n	Simple_repeat	1	52	(0)	2167292
15	15.1	2.6	2.5	chr2	177213180	177213218	(64980311)	+	G-rich	Low_complexity	1	40	(0)	2167293
16	16.8	0.0	0.0	chr2	183986034	183986060	(58207469)	+	(T)n	Simple_repeat	1	27	(0)	2175986
1082	21.4	3.6	3.2	chr2	183986064	183986309	(58207220)	+	MLT1E1A	LTR/ERVL-MaLR	432	678	(2)	2175987
2046	26.0	4.5	6.2	chr2	185730131	185730695	(56462834)	C	MLT1F2	LTR/ERVL-MaLR	(5)	555	1	2178181
17	3.2	5.9	2.8	chr2	189784481	189784514	(52409015)	+	(GCGGGT)n	Simple_repeat	1	36	(0)	2183366
802	24.6	10.7	3.2	chr2	197926582	197926725	(44266804)	C	MER113	DNA/hAT-Charlie	(155)	366	200	2194796
609	26.8	17.7	4.6	chr2	197926726	197927202	(44266327)	C	MLT1H1	LTR/ERVL-MaLR	(2)	553	1	2194797
12	22.4	0.0	2.6	chr2	199463510	199463547	(42729982)	+	G-rich	Low_complexity	1	38	(0)	2196853
2621	19.3	5.8	2.2	chr2	202116674	202117219	(40076310)	+	MLT1F1	LTR/ERVL-MaLR	1	567	(2)	2201240
2139	21.5	6.1	6.1	chr2	204066416	204066975	(38126554)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	2205081
1847	22.5	5.7	3.8	chr2	205853311	205853727	(36339802)	C	L1ME3A	LINE/L1	(95)	6078	5661	2207496
1822	23.6	9.1	5.2	chr2	205853728	205854264	(36339265)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	2207497
14	20.3	2.8	0.0	chr2	205950346	205950381	(36243148)	+	GA-rich	Low_complexity	1	37	(0)	2207667
2043	15.5	0.0	0.0	chr2	205950388	205950683	(36242846)	+	AluSz	SINE/Alu	1	296	(16)	2207668
237	16.7	4.0	0.0	chr2	205950690	205950737	(36242792)	C	MER103C	DNA/hAT-Charlie	(174)	123	74	2207669
366	27.0	5.5	2.1	chr2	205950795	205950934	(36242595)	+	SVA_C	Retroposon/SVA	196	340	(1044)	2207670
748	19.1	0.3	0.0	chr2	205950796	205950942	(36242587)	C	FLAM_C	SINE/Alu	(82)	220	9	2207671
2698	5.0	0.3	0.0	chr2	206157964	206158261	(36035268)	C	AluY	SINE/Alu	(12)	299	1	2208118
279	27.4	18.6	1.1	chr2	206158262	206158500	(36035029)	+	L2a	LINE/L2	2730	2780	(639)	2208117
2615	19.3	5.1	0.2	chr2	207186644	207187162	(35006367)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	1	2209654
2110	24.2	5.9	0.4	chr2	208487556	208488070	(33705459)	C	MLT1F2	LTR/ERVL-MaLR	(1)	559	15	2211935
1350	23.7	10.4	11.1	chr2	214921406	214921955	(27271574)	C	MLT1F2	LTR/ERVL-MaLR	(1)	559	14	2220323
1794	23.5	9.5	6.2	chr2	215877184	215877700	(26315829)	+	MLT1F2	LTR/ERVL-MaLR	1	536	(24)	2221777
528	23.2	0.5	2.4	chr2	215877706	215877849	(26315680)	+	MER34	LTR/ERV1	4	143	(428)	2221778
502	26.4	6.4	4.1	chr2	215877776	215877972	(26315557)	+	MER21A	LTR/ERVL	109	310	(621)	2221779
1021	19.7	10.8	2.6	chr2	215877832	215878138	(26315391)	+	MER39	LTR/ERV1	294	628	(79)	2221780
1905	20.6	10.9	9.3	chr2	217266337	217266894	(24926635)	+	MLT1F1	LTR/ERVL-MaLR	2	569	(0)	2224140
412	35.6	0.6	1.2	chr2	217425038	217425199	(24768330)	+	L2a	LINE/L2	3004	3164	(262)	2224376
2180	21.7	10.5	0.4	chr2	217425201	217425705	(24767824)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	8	2224379
2498	19.1	9.1	1.3	chr2	217745154	217745677	(24447852)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	2224887
2954	19.2	0.9	4.2	chr2	217981897	217982387	(24211142)	+	MLT1F	LTR/ERVL-MaLR	1	489	(59)	2225280
1984	15.2	0.3	1.6	chr2	217982388	217982690	(24210839)	C	AluJb	SINE/Alu	(1)	311	13	2225281
2118	10.9	1.7	0.3	chr2	218257923	218257935	(23935594)	C	AluSx	SINE/Alu	(15)	297	285	2225737
41	0.0	0.0	0.0	chr2	218257936	218257973	(23935556)	+	(TTGG)n	Simple_repeat	1	38	(0)	2225738
2118	10.9	1.7	0.3	chr2	218257974	218258252	(23935277)	C	AluSx	SINE/Alu	(28)	284	1	2225737
1637	24.1	7.4	6.7	chr2	219731211	219731735	(22461794)	C	MLT1F2	LTR/ERVL-MaLR	(31)	529	1	2228399
1267	26.5	7.4	6.5	chr2	219796014	219796521	(22397008)	+	MLT1G3	LTR/ERVL-MaLR	73	585	(10)	2228523
1109	26.7	10.5	10.2	chr2	220434040	220434597	(21758932)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	2229526
1854	25.7	4.9	5.6	chr2	220979835	220980391	(21213138)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	8	2230348
1287	21.4	5.8	2.8	chr2	221744146	221744519	(20449010)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	169	2231546
489	20.0	2.7	4.3	chr2	230677946	230678031	(11515498)	C	MLT1F2	LTR/ERVL-MaLR	(64)	590	507	2245502
384	19.8	0.0	2.9	chr2	230678032	230678118	(11515411)	+	FLAM_C	SINE/Alu	1	51	(82)	2245503
295	16.7	0.0	0.0	chr2	230678097	230678144	(11515385)	+	AluJo	SINE/Alu	255	302	(10)	2245504
20	6.5	0.0	2.9	chr2	230678145	230678181	(11515348)	+	(AAACAA)n	Simple_repeat	1	35	(0)	2245505
1544	24.3	10.1	1.1	chr2	230678182	230678551	(11514978)	C	MLT1F2	LTR/ERVL-MaLR	(153)	407	1	2245502
363	20.9	3.2	0.0	chr2	231832547	231832635	(10360894)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
331	23.9	2.1	0.0	chr2	231832636	231832725	(10360804)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
360	23.2	2.0	2.0	chr2	231832753	231832853	(10360676)	+	MER20	DNA/hAT-Charlie	119	219	(0)	2247713
467	10.6	13.0	0.0	chr2	232536017	232536110	(9657419)	C	MER53	DNA/hAT	(85)	108	1	2248814
1851	19.5	9.6	4.5	chr2	232536192	232536697	(9656832)	+	MLT1F	LTR/ERVL-MaLR	1	534	(14)	2248815
247	29.4	2.9	4.7	chr2	232536698	232536804	(9656725)	+	MIR	SINE/MIR	85	189	(73)	2248816
2124	21.5	6.5	5.6	chr2	234068826	234069185	(8124344)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	189	2251325
30	3.5	0.0	0.0	chr2	234069186	234069215	(8124314)	+	(GA)n	Simple_repeat	1	30	(0)	2251326
2124	21.5	6.5	5.6	chr2	234069216	234069392	(8124137)	C	MLT1F	LTR/ERVL-MaLR	(360)	188	6	2251325
1948	25.9	5.0	0.4	chr2	234118351	234118869	(8074660)	+	MLT1F	LTR/ERVL-MaLR	1	544	(4)	2251400
1194	23.0	18.7	4.7	chr2	234734969	234735500	(7458029)	+	MLT1E1A	LTR/ERVL-MaLR	58	680	(0)	2252449
313	20.0	1.2	3.6	chr2	234735547	234735629	(7457900)	+	L1ME4b	LINE/L1	809	889	(3)	2252450
1737	15.6	3.2	0.0	chr2	234803767	234804041	(7389488)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	265	2252554
308	38.8	7.7	1.5	chr2	234968410	234968676	(7224853)	C	L1M5	LINE/L1	(3310)	2836	2552	2252850
186	15.0	0.0	4.8	chr2	234968949	234968990	(7224539)	+	L2	LINE/L2	2077	2116	(1303)	2252851
1547	22.8	10.0	12.7	chr2	234979469	234980045	(7213484)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	2252868
1087	28.7	3.4	8.1	chr2	234980046	234980158	(7213371)	C	L1ME3D	LINE/L1	(341)	5901	5791	2252867
1875	22.1	11.8	6.8	chr2	236463698	236464227	(5729302)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	2255039
1731	24.7	2.5	5.2	chr2	236522709	236523165	(5670364)	C	MLT1F2	LTR/ERVL-MaLR	(3)	557	114	2255127
318	34.2	1.7	3.4	chr2	236858537	236858635	(5334894)	+	HAL1ME	LINE/L1	2337	2434	(31)	2255603
2167	23.5	5.8	0.9	chr2	236858636	236859176	(5334353)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	2255604
5282	12.6	7.2	2.3	chr2	237070316	237070955	(5122574)	+	MER4D1	LTR/ERV1	214	900	(0)	2255908
1075	21.4	0.9	1.4	chr2	237071014	237071226	(5122303)	+	MLT1F2	LTR/ERVL-MaLR	317	528	(32)	2255899
1566	23.9	9.3	5.8	chr2	238668263	238668863	(3524666)	+	MLT1E3	LTR/ERVL-MaLR	1	624	(0)	2258098
360	24.0	13.3	0.0	chr2	239188572	239188694	(3004835)	+	MER33	DNA/hAT-Charlie	1	128	(196)	2258663
1101	21.0	16.2	3.8	chr2	239188713	239189078	(3004451)	+	MLT1F	LTR/ERVL-MaLR	123	542	(6)	2258664
254	22.2	0.0	10.0	chr2	239189098	239189187	(3004342)	+	MER33	DNA/hAT-Charlie	244	324	(0)	2258665
733	18.8	14.6	1.6	chr2	239636492	239636675	(2556854)	+	MLT1E	LTR/ERVL-MaLR	349	653	(0)	2259159
1236	24.3	6.8	10.1	chr2	240616629	240617072	(1576457)	+	MLT1F2	LTR/ERVL-MaLR	1	428	(132)	2260219
549	21.4	0.8	2.5	chr2	240617067	240617186	(1576343)	+	MLT1F2	LTR/ERVL-MaLR	311	428	(132)	2260220
1072	21.1	2.4	1.6	chr2	240617181	240617426	(1576103)	+	MLT1F2	LTR/ERVL-MaLR	311	558	(2)	2260221
4766	24.4	6.8	8.8	chr2	240617463	240619377	(1574152)	C	L1MC5	LINE/L1	(745)	8559	6685	2260216
344	30.0	10.8	3.4	chr2	241186920	241187271	(1006258)	+	LTR16A2	LTR/ERVL	91	471	(24)	2260802
2630	20.6	2.9	1.7	chr20	320435	320976	(64123191)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	21	2262651
686	28.1	2.3	3.2	chr20	403435	403496	(64040671)	C	MIR	SINE/MIR	(19)	243	185	2262868
2600	21.2	3.6	0.6	chr20	403497	404027	(64040140)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	2262869
686	28.1	2.3	3.2	chr20	404028	404181	(64039986)	C	MIR	SINE/MIR	(78)	184	29	2262868
1480	22.0	14.6	0.5	chr20	721976	722364	(63721803)	+	MLT1F1	LTR/ERVL-MaLR	109	561	(8)	2263597
262	32.4	0.9	3.5	chr20	722421	722535	(63721632)	C	Charlie4z	DNA/hAT-Charlie	(37)	130	19	2263598
235	21.8	17.1	2.2	chr20	722697	722785	(63721382)	+	LTR79	LTR/ERVL	262	366	(161)	2263599
2260	24.5	1.6	1.0	chr20	1088690	1089186	(63354981)	+	MLT1F	LTR/ERVL-MaLR	1	500	(48)	2264406
845	21.8	14.2	0.0	chr20	1089187	1089374	(63354793)	C	MER58A	DNA/hAT-Charlie	(0)	224	6	2264407
1490	22.4	3.5	5.1	chr20	1555734	1556255	(62887912)	C	MLT1E1	LTR/ERVL-MaLR	(0)	654	1	2265197
1846	26.1	2.8	3.4	chr20	2388924	2389521	(62054646)	+	MLT1F	LTR/ERVL-MaLR	1	579	(0)	2266871
531	24.4	7.7	1.0	chr20	2389556	2389762	(62054405)	C	MER20B	DNA/hAT-Charlie	(38)	745	524	2266872
2258	10.1	0.3	0.3	chr20	2583464	2583759	(61860408)	C	AluSg7	SINE/Alu	(13)	296	1	2267220
1807	23.2	8.4	7.6	chr20	2583760	2583983	(61860184)	+	MLT1F2	LTR/ERVL-MaLR	342	560	(0)	2267219
2419	20.9	2.7	0.6	chr20	2703734	2704238	(61739929)	C	MLT1F	LTR/ERVL-MaLR	(32)	516	1	2267454
206	15.2	0.0	0.0	chr20	2873164	2873196	(61570971)	+	MIRc	SINE/MIR	121	153	(115)	2267730
1033	24.8	1.2	9.8	chr20	3775839	3776214	(60667953)	+	MLT1E1	LTR/ERVL-MaLR	312	654	(0)	2269476
2512	19.3	7.2	1.5	chr20	4585190	4585725	(59858442)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	2270980
1453	21.0	4.6	2.6	chr20	4840153	4840639	(59603528)	C	MLT1F1	LTR/ERVL-MaLR	(8)	561	1	2271429
2030	21.9	9.1	0.2	chr20	5641214	5641676	(58802491)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	41	2272930
375	27.5	1.8	5.2	chr20	16170207	16170321	(48273846)	C	Charlie4z	DNA/hAT-Charlie	(15)	152	42	2288969
304	17.2	1.7	0.0	chr20	16170425	16170482	(48273685)	C	MLT1H2	LTR/ERVL-MaLR	(0)	579	521	2288970
635	24.7	13.9	4.5	chr20	17802079	17802488	(46641679)	+	MLT1F	LTR/ERVL-MaLR	118	563	(6)	2291504
840	24.2	16.1	8.7	chr20	17890180	17890709	(46553458)	+	MLT1G1	LTR/ERVL-MaLR	1	577	(2)	2291684
1653	23.4	13.4	2.1	chr20	19899447	19899922	(44544245)	C	MLT1F2	LTR/ERVL-MaLR	(9)	551	14	2294830
2308	25.2	1.1	2.4	chr20	22746221	22746797	(41697370)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	2298811
288	30.5	3.1	7.8	chr20	22746865	22747031	(41697136)	+	LTR33	LTR/ERVL	353	511	(4)	2298812
977	23.2	12.2	10.1	chr20	24935859	24936404	(39507763)	+	MLT1F2	LTR/ERVL-MaLR	1	559	(1)	2301519
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
2617	5.8	0.3	0.0	chr20	31433580	31433888	(33010279)	+	AluY	SINE/Alu	1	310	(1)	2305922
454	28.2	7.4	10.9	chr20	31433889	31433922	(33010245)	+	MLT1F2	LTR/ERVL-MaLR	354	391	(178)	2305921
2392	9.0	0.0	1.6	chr20	31727877	31728188	(32715979)	+	AluY	SINE/Alu	2	308	(3)	2306731
835	17.1	16.6	0.0	chr20	31728194	31728473	(32715694)	+	MLT1F1	LTR/ERVL-MaLR	165	562	(7)	2306728
15	8.8	4.2	0.0	chr20	31728474	31728497	(32715670)	+	(AT)n	Simple_repeat	1	25	(0)	2306732
51	5.6	0.0	0.0	chr20	32037987	32038043	(32406124)	+	(AC)n	Simple_repeat	1	57	(0)	2307482
1064	18.2	3.2	1.4	chr20	32038096	32038301	(32405866)	+	MLT1F1	LTR/ERVL-MaLR	299	508	(61)	2307483
836	15.2	0.0	0.0	chr20	32038302	32038419	(32405748)	+	AluJr	SINE/Alu	1	118	(194)	2307484
2647	20.2	3.3	3.5	chr20	32253172	32253719	(32190448)	C	MLT1F	LTR/ERVL-MaLR	(1)	547	1	2308012
1841	21.9	6.5	3.6	chr20	33265401	33265921	(31178246)	C	MLT1F	LTR/ERVL-MaLR	(9)	539	3	2310296
2820	16.2	7.1	1.5	chr20	33407297	33407830	(31036337)	+	MLT1F1	LTR/ERVL-MaLR	4	569	(0)	2310634
2183	10.7	0.0	0.3	chr20	33744005	33744312	(30699855)	+	AluSq	SINE/Alu	6	312	(1)	2311491
491	32.4	13.3	4.2	chr20	33744313	33744477	(30699690)	C	L2c	LINE/L2	(221)	3166	2989	2311490
2242	9.4	0.0	0.0	chr20	33744593	33744891	(30699276)	C	AluSx	SINE/Alu	(13)	299	1	2311492
1724	22.8	11.9	7.7	chr20	34336699	34337105	(30107062)	+	MLT1F	LTR/ERVL-MaLR	162	548	(0)	2312819
535	28.0	6.8	7.2	chr20	34337106	34337205	(30106962)	+	MIR	SINE/MIR	107	212	(50)	2312818
1246	25.3	11.8	10.8	chr20	35887244	35887658	(28556509)	C	MLT1F2	LTR/ERVL-MaLR	(8)	552	111	2316322
1218	22.7	11.2	4.8	chr20	36003661	36004245	(28439922)	C	MLT1F2	LTR/ERVL-MaLR	(16)	553	2	2316617
20	13.4	0.0	4.4	chr20	36863794	36863838	(27580329)	+	GA-rich	Low_complexity	1	45	(0)	2318641
14	10.5	6.5	0.0	chr20	36863902	36863932	(27580235)	+	(CCT)n	Simple_repeat	1	33	(0)	2318642
886	23.0	1.5	1.0	chr20	38182417	38182614	(26261553)	+	LTR67B	LTR/ERVL	9	207	(413)	2321576
799	28.4	2.8	0.5	chr20	38182764	38182975	(26261192)	+	LTR67B	LTR/ERVL	404	620	(0)	2321576
2173	14.6	0.0	0.0	chr20	38284586	38284893	(26159274)	+	AluJb	SINE/Alu	1	308	(4)	2321813
2389	16.1	10.2	0.6	chr20	38284897	38285385	(26158782)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	8	2321814
2590	21.3	2.9	4.0	chr20	38905097	38905664	(25538503)	C	MLT1F1	LTR/ERVL-MaLR	(8)	561	1	2323126
2410	20.9	4.3	2.9	chr20	39068187	39068734	(25375433)	C	MLT1F2	LTR/ERVL-MaLR	(4)	556	1	2323433
435	28.2	2.2	6.4	chr20	39307945	39308014	(25136153)	C	MER5A	DNA/hAT-Charlie	(0)	189	124	2323900
1931	21.7	12.5	1.6	chr20	39308015	39308510	(25135657)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	1	2323901
1054	28.7	4.2	5.9	chr20	40374450	40375002	(24069165)	+	MLT1E1A	LTR/ERVL-MaLR	1	650	(30)	2325652
1526	24.0	5.7	10.3	chr20	40905639	40906223	(23537944)	+	MLT1F2	LTR/ERVL-MaLR	1	557	(3)	2326671
430	28.0	8.0	6.0	chr20	40906237	40906396	(23537771)	+	L2c	LINE/L2	2486	2643	(776)	2326672
2824	22.7	2.8	10.1	chr20	40906397	40906558	(23537609)	C	LTR102_Mam	LTR/ERVL	(0)	851	685	2326673
209	22.5	7.0	9.1	chr20	41735398	41735460	(22708707)	C	MIRc	SINE/MIR	(87)	181	113	2328023
2211	21.1	7.5	1.9	chr20	41735461	41735976	(22708191)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	2	2328024
1907	12.4	14.9	6.2	chr20	43747226	43747540	(20696627)	+	MSTA	LTR/ERVL-MaLR	1	370	(58)	2331882
2370	8.7	0.0	3.7	chr20	43747541	43747862	(20696305)	C	AluSp	SINE/Alu	(3)	310	1	2331883
2349	11.0	0.0	0.0	chr20	43989498	43989797	(20454370)	+	AluSz	SINE/Alu	1	300	(12)	2332409
637	30.1	1.0	1.0	chr20	43989804	43989998	(20454169)	C	MLT1F2	LTR/ERVL-MaLR	(56)	504	310	2332410
687	25.4	6.4	3.6	chr20	43990012	43990207	(20453960)	+	MIR	SINE/MIR	49	250	(12)	2332411
476	26.6	7.5	0.2	chr20	44130912	44131052	(20313115)	+	MIR	SINE/MIR	9	160	(48)	2332716
1598	20.6	12.9	1.3	chr20	44131064	44131521	(20312646)	+	MLT1F2	LTR/ERVL-MaLR	42	560	(0)	2332717
505	20.0	4.2	1.7	chr20	44131522	44131638	(20312529)	+	MIR	SINE/MIR	140	259	(3)	2332716
2893	0.7	0.0	0.0	chr20	44270165	44270469	(20173698)	C	AluYa5	SINE/Alu	(6)	305	1	2333061
2377	21.9	4.4	3.0	chr20	44270470	44270975	(20173192)	C	MLT1F1	LTR/ERVL-MaLR	(55)	514	1	2333060
1633	17.2	6.3	0.7	chr20	44270982	44271265	(20172902)	+	AluJb	SINE/Alu	3	303	(9)	2333062
364	27.8	0.8	1.6	chr20	45100620	45100747	(19343420)	C	MIRb	SINE/MIR	(14)	254	128	2335013
291	24.3	0.9	17.8	chr20	47679337	47679471	(16764696)	+	MLT1E1	LTR/ERVL-MaLR	23	134	(519)	2340621
843	21.3	6.8	0.2	chr20	47679633	47679835	(16764332)	+	MLT1E1	LTR/ERVL-MaLR	342	654	(0)	2340621
721	24.4	12.0	1.2	chr20	47679836	47680080	(16764087)	+	L2a	LINE/L2	3148	3422	(4)	2340620
357	28.4	1.7	1.7	chr20	48297676	48297793	(16146374)	+	Charlie15a	DNA/hAT-Charlie	70	187	(37)	2341848
1876	23.7	7.9	7.4	chr20	48297941	48298496	(16145671)	C	MLT1F2	LTR/ERVL-MaLR	(1)	559	1	2341849
1538	22.8	13.3	11.1	chr20	48816307	48816966	(15627201)	+	MLT1E1A	LTR/ERVL-MaLR	3	679	(1)	2342939
501	21.7	1.9	5.7	chr20	48816967	48817052	(15627115)	+	MIR	SINE/MIR	76	162	(46)	2342938
1271	20.2	12.9	0.0	chr20	48916661	48916992	(15527175)	+	MLT1F	LTR/ERVL-MaLR	168	548	(0)	2343203
1263	29.4	3.7	2.9	chr20	49310430	49310469	(15133698)	C	L2a	LINE/L2	(43)	3383	3341	2344079
2205	21.8	5.5	5.4	chr20	49310470	49311027	(15133140)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	2	2344080
2022	28.0	7.8	3.9	chr20	49311028	49311442	(15132725)	C	L2a	LINE/L2	(86)	3340	2925	2344079
497	22.0	10.2	14.3	chr20	50636265	50636481	(13807686)	+	MamRep38	DNA/hAT	1	207	(88)	2347340
2189	13.9	0.0	0.0	chr20	50975228	50975530	(13468637)	C	AluSq2	SINE/Alu	(10)	303	1	2348129
339	30.8	15.6	2.9	chr20	50975721	50976071	(13468096)	+	L2a	LINE/L2	962	1365	(2054)	2348130
22	31.3	0.0	2.5	chr20	51054958	51055036	(13389131)	+	(TG)n	Simple_repeat	1	79	(0)	2348310
926	24.1	14.0	3.6	chr20	51055084	51055546	(13388621)	C	MLT1F2	LTR/ERVL-MaLR	(8)	552	2	2348311
1171	22.6	4.5	6.2	chr20	51056639	51057243	(13386924)	+	MLT1F2	LTR/ERVL-MaLR	8	680	(0)	2348317
1056	24.0	4.2	7.2	chr20	51325213	51325820	(13118347)	C	MLT1F2	LTR/ERVL-MaLR	(0)	654	2	2348912
32	2.9	0.0	0.0	chr20	51574646	51574680	(12869487)	+	(TGAA)n	Simple_repeat	1	35	(0)	2349421
17	4.3	0.0	0.0	chr20	51574690	51574713	(12869454)	+	(TGGA)n	Simple_repeat	1	24	(0)	2349422
2107	20.8	8.1	2.3	chr20	51574731	51575256	(12868911)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	11	2349423
2020	22.7	3.6	6.2	chr20	51628332	51628898	(12815269)	+	MLT1F2	LTR/ERVL-MaLR	9	560	(0)	2349524
1025	21.1	8.7	2.4	chr20	52381101	52381330	(12062837)	+	MER46C	DNA/TcMar-Tigger	1	251	(87)	2351389
1920	23.3	8.0	5.2	chr20	52381331	52381873	(12062294)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	2351390
1566	26.4	3.4	7.7	chr20	53310386	53310969	(11133198)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	3	2353208
2196	9.4	2.3	1.7	chr20	53880974	53881272	(10562895)	+	AluY	SINE/Alu	3	303	(8)	2354572
485	23.7	11.1	2.9	chr20	53881273	53881354	(10562813)	C	LTR79	LTR/ERVL	(96)	431	330	2354570
343	24.0	8.3	1.6	chr20	53881412	53881534	(10562633)	C	LTR79	LTR/ERVL	(328)	199	68	2354570
1163	20.9	1.4	0.5	chr20	54141480	54141695	(10302472)	+	MER20	DNA/hAT-Charlie	2	219	(0)	2355135
1491	23.2	3.2	0.6	chr20	54141713	54141999	(10302168)	+	MLT1F	LTR/ERVL-MaLR	179	474	(74)	2355136
2107	13.7	1.2	1.8	chr20	54142000	54142340	(10301827)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	2355137
1672	20.8	8.7	9.8	chr20	54232409	54232968	(10211199)	+	MLT1F2	LTR/ERVL-MaLR	3	555	(5)	2355315
1254	22.2	10.9	13.1	chr20	54616564	54616770	(9827397)	C	MLT1F2	LTR/ERVL-MaLR	(3)	557	349	2356025
27	3.5	0.0	0.0	chr20	54616771	54616800	(9827367)	+	(T)n	Simple_repeat	1	30	(0)	2356026
2342	6.0	0.0	1.1	chr20	54616806	54617089	(9827078)	C	AluY	SINE/Alu	(30)	281	1	2356027
1870	23.1	3.2	1.4	chr20	56962604	56963115	(7481052)	+	MLT1F	LTR/ERVL-MaLR	15	569	(0)	2360268
263	20.0	1.8	0.0	chr20	57034382	57034436	(7409731)	+	MLT1F2	LTR/ERVL-MaLR	68	123	(446)	2360413
1280	22.1	6.7	10.1	chr20	57034468	57034884	(7409283)	+	MLT1F2	LTR/ERVL-MaLR	121	522	(38)	2360413
299	25.4	2.7	0.0	chr20	57034896	57034966	(7409201)	+	L2b	LINE/L2	3303	3375	(0)	2360414
1757	23.6	9.9	4.8	chr20	57458250	57458831	(6985336)	C	MLT1E3	LTR/ERVL-MaLR	(9)	615	1	2361233
2150	21.0	13.0	0.4	chr20	57507497	57507872	(6936295)	+	MLT1F1	LTR/ERVL-MaLR	136	569	(0)	2361326
2154	14.4	0.0	0.3	chr20	58462862	58463167	(5981000)	+	AluSc5	SINE/Alu	1	305	(4)	2362966
248	29.9	5.5	6.7	chr20	58463168	58463278	(5980889)	+	L1ME4c	LINE/L1	359	478	(352)	2362964
17	10.3	0.0	5.6	chr20	58463515	58463550	(5980617)	+	(TTC)n	Simple_repeat	1	36	(0)	2362967
20	12.3	2.1	4.1	chr20	58463551	58463561	(5980606)	+	(TTTCTTC)n	Simple_repeat	2	49	(0)	2362968
1418	24.1	4.9	5.5	chr20	59504298	59504853	(4939314)	+	MLT1E1A	LTR/ERVL-MaLR	1	664	(16)	2364581
16	0.0	0.0	0.0	chr20	62065823	62065842	(2378325)	+	(GCC)n	Simple_repeat	1	20	(0)	2368054
81	21.6	1.4	3.2	chr20	63653429	63653646	(790521)	+	G-rich	Low_complexity	1	221	(0)	2369848
1877	16.3	0.3	0.3	chr20	63809690	63809984	(634183)	+	AluJb	SINE/Alu	11	305	(7)	2370064
285	32.2	8.2	0.9	chr20	63810096	63810266	(633901)	+	L1ME4c	LINE/L1	364	525	(305)	2370065
25	19.9	1.5	1.5	chr20	64067909	64067973	(376194)	+	(GGCTGG)n	Simple_repeat	1	66	(0)	2370478
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
1263	30.4	12.1	1.4	chr21	9257066	9257711	(37452272)	C	L2	LINE/L2	(1779)	1640	916	2374355
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
620	23.1	11.5	2.4	chr21	10427740	10427952	(36282031)	C	MIR	SINE/MIR	(11)	251	17	2375543
1323	27.8	10.2	6.8	chr21	16644392	16644931	(30065052)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	2380702
2220	12.3	6.3	1.1	chr21	31618817	31619177	(15090806)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2401750
2281	22.0	3.8	5.2	chr21	31619178	31619592	(15090391)	+	MLT1F	LTR/ERVL-MaLR	133	548	(0)	2401749
152	2.8	0.0	0.0	chr21	32771844	32771990	(13937993)	+	(GA)n	Simple_repeat	1	147	(0)	2403728
1744	23.7	9.4	4.4	chr21	33369986	33370576	(13339407)	+	MLT1E3	LTR/ERVL-MaLR	1	624	(0)	2404813
2175	23.7	7.0	3.0	chr21	34247666	34248024	(12461959)	+	MLT1F2	LTR/ERVL-MaLR	177	560	(0)	2406341
2212	15.3	2.7	0.5	chr21	34681042	34681408	(12028575)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2407008
2012	20.7	2.9	10.9	chr21	34681409	34681892	(12028091)	C	MLT1F1	LTR/ERVL-MaLR	(125)	444	3	2407007
1508	24.2	4.6	6.8	chr21	35287269	35287704	(11422279)	+	MLT1E1A	LTR/ERVL-MaLR	167	680	(0)	2407893
2130	11.9	1.3	0.0	chr21	37579027	37579320	(9130663)	C	AluSc	SINE/Alu	(10)	299	2	2411823
1274	28.2	4.6	5.9	chr21	37579321	37579542	(9130441)	C	L1MEf	LINE/L1	(5480)	1557	1119	2411822
336	36.5	10.5	4.8	chr21	38924827	38925220	(7784763)	C	L2b	LINE/L2	(1)	3374	2956	2413709
651	22.5	1.5	0.0	chr21	38925396	38925524	(7784459)	+	FLAM_A	SINE/Alu	1	131	(11)	2413710
656	30.5	6.5	6.9	chr21	39130813	39131217	(7578766)	C	MLT1J	LTR/ERVL-MaLR	(6)	506	104	2414048
913	27.6	9.3	6.6	chr21	39131230	39131760	(7578223)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	14	2414049
932	22.7	8.5	0.8	chr21	39678583	39678822	(7031161)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	301	2415002
12	28.7	0.0	0.0	chr21	39678861	39678902	(7031081)	+	(TATCTC)n	Simple_repeat	1	42	(0)	2415003
1284	25.2	2.1	4.0	chr21	39678903	39679249	(7030734)	C	MLT2C1	LTR/ERVL	(57)	340	1	2415004
1403	26.6	2.7	13.0	chr21	40251624	40252240	(6457743)	+	MLT1F2	LTR/ERVL-MaLR	1	552	(8)	2415736
411	28.6	3.6	2.2	chr21	42138091	42138226	(4571757)	+	MIR	SINE/MIR	55	192	(70)	2418484
265	21.6	11.1	0.0	chr21	44818659	44818746	(1891237)	C	MIR	SINE/MIR	(118)	144	46	2422190
18	0.0	0.0	0.0	chr21	46302072	46302094	(407889)	+	(TGG)n	Simple_repeat	1	23	(0)	2423757
613	28.5	14.0	2.0	chr21	46642022	46642415	(67568)	+	L1ME4a	LINE/L1	5449	5897	(227)	2424221
1062	7.7	0.0	0.0	chr22	11310020	11310186	(39508282)	C	BSR/Beta	Satellite	(0)	167	1	2425025
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
1118	10.7	0.3	0.1	chr22	11814559	11816405	(39002063)	C	ACRO1	Satellite/acro	(55)	1851	1	2425389
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
2046	15.2	0.0	0.0	chr22	11877779	11878081	(38940387)	C	AluSx	SINE/Alu	(4)	308	6	2425483
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
3058	20.8	2.7	1.3	chr22	11900876	11902001	(38916467)	C	L1MA5	LINE/L1	(354)	5946	4805	2425510
3134	12.3	0.8	0.0	chr22	11930604	11931100	(38887368)	+	L1PA13	LINE/L1	5175	5675	(1091)	2425549
194	23.1	0.0	1.9	chr22	12174483	12174535	(38643933)	+	MER5A	DNA/hAT-Charlie	118	169	(20)	2425783
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
1799	11.1	9.2	1.1	chr22	17455611	17455889	(33362579)	C	AluSx	SINE/Alu	(8)	304	1	2429040
285	22.1	33.6	7.2	chr22	17455890	17456018	(33362450)	C	MLT1F	LTR/ERVL-MaLR	(57)	491	327	2429039
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
12	20.7	0.0	2.9	chr22	19941852	19941886	(30876582)	+	(GCCGG)n	Simple_repeat	1	35	(0)	2432713
113	29.2	1.3	4.4	chr22	20496137	20496610	(30321858)	+	(TCCC)n	Simple_repeat	1	480	(0)	2433428
3854	19.6	6.8	1.3	chr22	21712805	21713750	(29104718)	+	L1MB3	LINE/L1	5169	6177	(6)	2435735
1193	22.9	4.4	6.4	chr22	22565743	22566069	(28252399)	C	MLT1E1A	LTR/ERVL-MaLR	(5)	675	356	2437087
258	17.4	0.0	0.0	chr22	22566061	22566106	(28252362)	C	MLT1E1A	LTR/ERVL-MaLR	(506)	148	103	2437087
395	27.3	2.7	0.0	chr22	22566075	22566184	(28252284)	C	MLT1E1A	LTR/ERVL-MaLR	(396)	164	52	2437087
12	17.3	5.1	6.5	chr22	24271045	24271103	(26547365)	+	(CGCCCG)n	Simple_repeat	1	62	(0)	2439767
12	21.9	3.5	5.0	chr22	24271090	24271147	(26547321)	+	(CCTGCG)n	Simple_repeat	1	60	(0)	2439768
464	21.4	4.8	0.0	chr22	25019993	25020090	(25798378)	C	L1ME4c	LINE/L1	(364)	466	364	2441263
522	28.4	5.8	6.2	chr22	25020107	25020350	(25798118)	+	MIRb	SINE/MIR	12	254	(14)	2441264
2884	16.8	7.3	0.9	chr22	25477995	25478518	(25339950)	+	MLT1F1	LTR/ERVL-MaLR	1	560	(9)	2442290
2091	21.7	4.3	6.6	chr22	26378881	26379452	(24439016)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	3	2444216
1789	16.8	6.5	4.9	chr22	26694234	26694640	(24123828)	C	L1MA9	LINE/L1	(10)	6302	5889	2444952
261	29.5	0.0	0.0	chr22	26694650	26694710	(24123758)	C	L2a	LINE/L2	(248)	3178	3118	2444951
1015	25.7	8.2	6.5	chr22	26694722	26695171	(24123297)	C	MLT1E1A	LTR/ERVL-MaLR	(17)	663	131	2444953
395	20.6	14.3	3.0	chr22	27223173	27223327	(23595141)	C	L2a	LINE/L2	(21)	3405	3183	2446241
2287	21.1	9.8	0.6	chr22	27223328	27223843	(23594625)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	2446242
1296	25.8	5.1	7.9	chr22	27252371	27252957	(23565511)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	1	2446301
26	10.8	2.4	0.0	chr22	27332905	27332945	(23485523)	+	(AC)n	Simple_repeat	1	42	(0)	2446481
195	37.4	1.0	0.0	chr22	27332987	27333085	(23485383)	C	L2b	LINE/L2	(0)	3375	3276	2446482
1652	25.9	7.7	7.2	chr22	27333088	27333644	(23484824)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	2446483
1478	24.9	4.8	6.2	chr22	27740439	27741015	(23077453)	+	MLT1E1A	LTR/ERVL-MaLR	52	675	(5)	2447419
2244	13.3	0.0	1.3	chr22	27741017	27741331	(23077137)	+	AluSz	SINE/Alu	2	312	(0)	2447420
26	19.0	4.4	5.3	chr22	28773015	28773138	(22045330)	+	G-rich	Low_complexity	1	122	(0)	2449171
1945	20.9	5.2	8.9	chr22	29117872	29118412	(21700056)	C	MLT1F2	LTR/ERVL-MaLR	(8)	552	33	2449919
1403	17.0	14.5	3.7	chr22	29396171	29396518	(21421950)	+	MSTD	LTR/ERVL-MaLR	1	392	(4)	2450473
319	25.4	11.6	7.8	chr22	29396519	29396626	(21421842)	+	MIRb	SINE/MIR	153	268	(0)	2450472
2013	14.9	0.3	0.7	chr22	29461499	29461800	(21356668)	C	AluJb	SINE/Alu	(11)	301	1	2450613
320	30.9	3.6	12.3	chr22	29461801	29461962	(21356506)	C	L2b	LINE/L2	(259)	3116	2967	2450612
438	27.6	21.2	0.9	chr22	29461952	29462145	(21356323)	+	MIR	SINE/MIR	6	235	(33)	2450614
1762	15.5	2.4	0.7	chr22	29494218	29494501	(21323967)	+	AluJr4	SINE/Alu	21	309	(3)	2450695
2350	18.0	8.9	8.4	chr22	29494502	29495008	(21323460)	+	MLT1F2	LTR/ERVL-MaLR	29	550	(10)	2450694
738	27.7	7.5	1.1	chr22	29495017	29495279	(21323189)	C	MLT1K	LTR/ERVL-MaLR	(202)	393	113	2450693
2162	19.6	6.0	5.2	chr22	30538363	30538776	(20279692)	+	MLT1F	LTR/ERVL-MaLR	128	547	(1)	2452847
1661	20.2	6.6	2.9	chr22	30992090	30992466	(19826002)	+	MLT1E1A	LTR/ERVL-MaLR	287	678	(2)	2453718
1651	17.6	1.3	6.7	chr22	31144484	31144813	(19673655)	+	AluJr	SINE/Alu	1	312	(0)	2454103
1866	16.7	8.5	7.1	chr22	31144814	31144973	(19673495)	+	MLT1F1	LTR/ERVL-MaLR	239	412	(157)	2454102
1211	16.2	5.6	0.0	chr22	31144974	31145207	(19673261)	C	L1MB7	LINE/L1	(0)	6184	5937	2454104
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
1730	26.9	9.9	0.4	chr22	33637430	33637925	(17180543)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	2459488
212	29.3	18.8	0.0	chr22	35351108	35351269	(15467199)	+	MIRb	SINE/MIR	11	200	(68)	2462757
301	30.8	7.1	0.0	chr22	35351413	35351555	(15466913)	C	L1MC4	LINE/L1	(1407)	6635	6482	2462758
1648	21.0	0.3	0.7	chr22	35432941	35433235	(15385233)	C	AluJo	SINE/Alu	(18)	294	1	2462982
245	33.0	4.3	0.9	chr22	35433409	35433521	(15384947)	C	MIR3	SINE/MIR	(89)	119	3	2462983
466	19.4	8.0	0.0	chr22	35993365	35993467	(14825001)	+	MLT1F1	LTR/ERVL-MaLR	1	112	(457)	2464112
1146	16.8	1.9	0.0	chr22	35993486	35993694	(14824774)	+	MLT1F1	LTR/ERVL-MaLR	355	567	(2)	2464112
212	31.1	8.6	1.9	chr22	36752928	36753035	(14065433)	+	MIR	SINE/MIR	36	151	(111)	2465781
347	25.0	10.2	7.3	chr22	36753189	36753616	(14064852)	+	L2b	LINE/L2	2738	3181	(194)	2465782
201	34.5	2.5	0.8	chr22	36753552	36753668	(14064800)	+	OldhAT1	DNA/hAT-Ac	491	609	(2239)	2465783
2389	11.0	0.0	1.9	chr22	37004670	37004987	(13813481)	C	AluSz	SINE/Alu	(0)	312	1	2466297
1195	23.2	2.3	11.6	chr22	37004988	37005417	(13813051)	+	MLT1F2	LTR/ERVL-MaLR	172	560	(0)	2466298
1825	30.3	14.2	10.0	chr22	37005419	37006723	(13811745)	+	MLT1F2-int	LTR/ERVL-MaLR	2	1370	(1)	2466298
316	28.8	13.7	0.7	chr22	37310293	37310419	(13508049)	+	MIRb	SINE/MIR	34	181	(87)	2466954
2013	21.0	6.5	1.0	chr22	37432457	37432961	(13385507)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	12	2467222
20	21.3	1.5	4.5	chr22	37560333	37560398	(13258070)	+	G-rich	Low_complexity	1	67	(0)	2467529
2235	6.2	0.4	2.4	chr22	37848993	37849280	(12969188)	C	AluSp	SINE/Alu	(20)	293	12	2468218
29	0.0	0.0	0.0	chr22	37922578	37922602	(12895866)	+	(TA)n	Simple_repeat	1	25	(0)	2468423
2272	8.8	3.9	0.0	chr22	37922603	37922776	(12895692)	C	AluSp	SINE/Alu	(6)	307	134	2468424
498	26.6	3.8	0.8	chr22	39371785	39371913	(11446555)	+	MIRb	SINE/MIR	25	157	(111)	2471507
1322	21.7	3.8	13.4	chr22	39371920	39372123	(11446345)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	352	2471508
2088	11.6	0.0	0.4	chr22	39372124	39372424	(11446044)	C	AluSc8	SINE/Alu	(0)	311	7	2471509
2797	23.4	3.0	6.6	chr22	40620574	40620899	(10197569)	+	MLT1D-int	LTR/ERVL-MaLR	605	887	(484)	2473931
2089	14.0	0.7	0.7	chr22	40620900	40621207	(10197261)	+	AluJo	SINE/Alu	1	308	(4)	2473935
1910	19.9	7.8	0.0	chr22	40631926	40632291	(10186177)	+	MLT1F	LTR/ERVL-MaLR	1	397	(151)	2473963
1258	15.5	1.8	2.2	chr22	40632292	40632450	(10186018)	C	AluSx	SINE/Alu	(18)	294	135	2473964
2037	12.3	2.7	0.0	chr22	40632451	40632735	(10185733)	C	AluSz	SINE/Alu	(19)	293	1	2473965
15	17.7	2.1	4.1	chr22	41620709	41620756	(9197712)	+	(CCTGCCC)n	Simple_repeat	1	49	(0)	2476343
23	20.5	1.6	4.1	chr22	41910210	41910277	(8908191)	+	G-rich	Low_complexity	1	66	(0)	2477040
3620	15.9	5.8	3.6	chr22	42072455	42072662	(8745806)	C	MER39	LTR/ERV1	(474)	233	1	2477370
1065	22.6	16.3	0.1	chr22	42072664	42073358	(8745110)	+	L2a	LINE/L2	2408	3259	(167)	2477373
335	27.7	5.9	1.8	chr22	42359925	42360038	(8458430)	C	MIRb	SINE/MIR	(125)	143	18	2477880
182	39.2	2.3	0.8	chr22	42360052	42360177	(8458291)	+	L2c	LINE/L2	3000	3127	(260)	2477881
367	30.6	9.5	8.4	chr22	42360161	42360481	(8457987)	+	L2b	LINE/L2	3029	3353	(22)	2477882
2422	11.1	0.0	0.0	chr22	43390568	43390874	(7427594)	C	AluSx	SINE/Alu	(5)	307	1	2480148
1078	24.8	13.6	5.1	chr22	43390875	43391252	(7427216)	C	MLT1F2	LTR/ERVL-MaLR	(126)	434	1	2480147
3247	20.0	2.8	2.3	chr22	44060776	44061146	(6757322)	C	Tigger17a	DNA/TcMar-Tigger	(0)	654	286	2481293
2396	9.5	0.0	0.0	chr22	44498601	44498906	(6319562)	C	AluSx	SINE/Alu	(6)	306	1	2482061
2420	7.8	0.0	1.9	chr22	45573394	45573701	(5244767)	+	AluSx3	SINE/Alu	1	302	(9)	2484186
669	29.9	4.3	3.0	chr22	45573702	45573930	(5244538)	+	L1ME3B	LINE/L1	6002	6241	(1)	2484185
12	17.7	5.0	2.4	chr22	46531834	46531873	(4286595)	+	(GGT)n	Simple_repeat	1	42	(0)	2485679
236	32.9	12.7	0.7	chr22	47020705	47020842	(3797626)	+	MLT1E1	LTR/ERVL-MaLR	1	157	(403)	2486347
538	28.6	10.6	7.6	chr22	47020900	47021137	(3797331)	+	MLT1E1	LTR/ERVL-MaLR	298	543	(111)	2486347
252	33.2	8.6	4.4	chr22	47857619	47858451	(2960017)	C	L1PA6	LINE/L1	(8)	6146	6116	2487470
1767	28.5	6.8	0.9	chr22	47858455	47858979	(2959489)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	1	2487471
1421	26.9	5.9	4.0	chr22	47924149	47924679	(2893789)	C	MLT1F2	LTR/ERVL-MaLR	(14)	546	5	2487568
616	28.6	11.6	3.8	chr22	49331772	49332114	(1486354)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	264	2489229
349	33.5	8.4	5.0	chr22	49520302	49520365	(1298103)	+	L1ME3D	LINE/L1	743	815	(182)	2489472
952	26.4	3.4	4.6	chr22	49520372	49520673	(1297795)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	383	2489474
374	27.1	13.2	1.7	chr22	49520794	49520973	(1297495)	C	MLT1E1A	LTR/ERVL-MaLR	(355)	205	2	2489474
7724	8.4	1.9	0.1	chr22	50240982	50241969	(576499)	+	LTR13	LTR/ERVK	2	1007	(0)	2490365
25	6.5	0.0	0.0	chr22	50241984	50242015	(576453)	+	(A)n	Simple_repeat	1	32	(0)	2490366
2340	7.5	0.7	0.0	chr22	50242024	50242318	(576150)	+	AluY	SINE/Alu	14	310	(1)	2490367
1333	11.3	0.6	0.0	chr22	50242336	50242512	(575956)	+	AluSx	SINE/Alu	122	299	(13)	2490368
2140	24.0	6.8	5.9	chr3	5255092	5255701	(193039858)	C	MLT1E2	LTR/ERVL-MaLR	(2)	625	10	2500499
14581	8.1	0.9	0.1	chr3	15192838	15195732	(183099827)	+	L1PA7	LINE/L1	3228	6142	(12)	2518348
3670	15.4	2.1	2.7	chr3	15397615	15398197	(182897362)	+	LTR8A	LTR/ERV1	60	672	(55)	2518745
2033	20.6	2.3	4.8	chr3	15896795	15897331	(182398228)	+	MLT1E1A	LTR/ERVL-MaLR	63	678	(2)	2519582
1192	26.4	12.5	8.4	chr3	16412573	16413106	(181882453)	+	MLT1F2	LTR/ERVL-MaLR	1	559	(1)	2520453
14	16.2	0.0	0.0	chr3	19947408	19947435	(178348124)	+	(CGC)n	Simple_repeat	1	28	(0)	2525351
256	28.7	4.2	1.7	chr3	23411006	23411122	(174884437)	+	L1MEj	LINE/L1	727	846	(1314)	2530112
2181	21.6	4.3	7.8	chr3	23976249	23976829	(174318730)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	2531126
185	28.3	0.0	7.7	chr3	24734080	24734144	(173561415)	+	L2b	LINE/L2	3311	3370	(5)	2532310
1339	26.1	5.7	0.9	chr3	24734330	24734677	(173560882)	C	MLT1F	LTR/ERVL-MaLR	(171)	377	12	2532311
12	9.8	0.0	0.0	chr3	25449460	25449481	(172846078)	+	(CTGT)n	Simple_repeat	1	22	(0)	2533336
185	24.2	4.3	7.0	chr3	25449518	25449588	(172845971)	+	Tigger19b	DNA/TcMar-Tigger	216	284	(266)	2533337
16	14.2	0.0	0.0	chr3	27484180	27484224	(170811335)	+	(CTGCCG)n	Simple_repeat	1	45	(0)	2536145
16	27.1	4.5	3.2	chr3	27484236	27484324	(170811235)	+	(CGTG)n	Simple_repeat	1	93	(0)	2536146
1400	24.3	8.7	5.5	chr3	28289940	28290752	(170004807)	C	L1M7	LINE/L1	(217)	2248	1182	2537582
1849	24.9	6.1	4.0	chr3	28290788	28291318	(170004241)	C	MLT1F2	LTR/ERVL-MaLR	(15)	545	3	2537583
2243	23.6	3.0	0.0	chr3	28533405	28533849	(169761710)	+	MLT1F	LTR/ERVL-MaLR	1	459	(89)	2537879
1078	24.8	14.0	5.4	chr3	32383078	32383611	(165911948)	+	MLT1G3	LTR/ERVL-MaLR	6	592	(3)	2543774
1567	23.9	12.2	2.0	chr3	38368390	38368880	(159926679)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	1	2552944
2389	11.0	0.0	0.3	chr3	39647826	39648135	(158647424)	+	AluSx4	SINE/Alu	1	309	(1)	2554849
766	23.6	31.4	5.0	chr3	39648136	39648432	(158647127)	C	MLT1E	LTR/ERVL-MaLR	(151)	502	65	2554848
1856	23.4	6.7	6.9	chr3	40575844	40576394	(157719165)	+	MLT1F2	LTR/ERVL-MaLR	1	550	(10)	2556239
1310	22.6	2.8	1.0	chr3	40576402	40576778	(157718781)	C	L1ME2	LINE/L1	(488)	5676	5290	2556238
2533	19.7	7.2	0.0	chr3	45180006	45180533	(153115026)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	2563383
2592	18.2	11.4	0.4	chr3	46561998	46562503	(151733056)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	2565605
2095	19.8	15.5	0.6	chr3	46917162	46917643	(151377916)	+	MLT1F1	LTR/ERVL-MaLR	1	567	(2)	2566113
346	17.3	8.7	3.2	chr3	46917644	46917781	(151377778)	C	L1MD2	LINE/L1	(26)	6216	6041	2566100
15	26.8	0.0	0.0	chr3	47163892	47163936	(151131623)	+	(CTGCGG)n	Simple_repeat	1	45	(0)	2566541
36	0.0	2.4	2.4	chr3	47164013	47164053	(151131506)	+	(GCG)n	Simple_repeat	1	42	(0)	2566542
17	24.5	1.5	4.3	chr3	47164059	47164126	(151131433)	+	(TCCC)n	Simple_repeat	1	69	(0)	2566543
2095	13.8	0.3	1.0	chr3	49924397	49924700	(148370859)	+	AluSx1	SINE/Alu	1	302	(10)	2572221
3031	17.2	6.2	1.2	chr3	49924701	49925088	(148370471)	+	MLT1F	LTR/ERVL-MaLR	134	548	(0)	2572220
190	30.4	0.0	0.0	chr3	52534823	52534878	(145760681)	C	L2b	LINE/L2	(9)	3366	3311	2575998
3671	17.4	5.7	6.2	chr3	53301537	53302311	(144993248)	+	L1MD2	LINE/L1	5584	6357	(2)	2577397
4237	8.8	2.5	2.0	chr3	54646264	54646867	(143648692)	C	L1PA11	LINE/L1	(21)	6153	5547	2579341
1501	23.2	2.8	3.8	chr3	54646868	54647296	(143648263)	+	MLT1E1A	LTR/ERVL-MaLR	218	680	(0)	2579339
2012	23.9	8.8	4.0	chr3	54911854	54912384	(143383175)	C	MLT1F2	LTR/ERVL-MaLR	(1)	559	1	2579696
1398	22.8	1.7	5.1	chr3	55172337	55172809	(143122750)	+	MLT1E1A	LTR/ERVL-MaLR	98	678	(2)	2580059
314	30.4	0.0	4.3	chr3	55298895	55299035	(142996524)	C	L1ME3G	LINE/L1	(311)	613	479	2580232
1416	22.1	5.8	4.0	chr3	55299042	55299538	(142996021)	+	MLT1F2	LTR/ERVL-MaLR	8	559	(1)	2580233
509	30.4	9.1	3.0	chr3	55299546	55299938	(142995621)	C	L1ME3G	LINE/L1	(450)	474	56	2580232
2412	22.3	6.4	7.3	chr3	56375677	56376241	(141919318)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	2582007
1583	22.2	7.9	6.3	chr3	56844793	56845363	(141450196)	+	MLT1E1A	LTR/ERVL-MaLR	3	680	(0)	2582847
214	28.4	6.4	3.3	chr3	59559972	59560062	(138735497)	C	MIRb	SINE/MIR	(142)	126	33	2587688
1386	25.4	5.1	6.0	chr3	59560184	59560615	(138734944)	C	MLT1F2	LTR/ERVL-MaLR	(132)	428	1	2587689
2561	20.1	6.5	3.6	chr3	61532715	61533104	(136762455)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	170	2590765
2497	11.0	0.0	0.0	chr3	61533105	61533405	(136762154)	+	AluSz	SINE/Alu	2	302	(10)	2590766
884	25.4	12.7	1.5	chr3	62123024	62123300	(136172259)	C	MLT1F2	LTR/ERVL-MaLR	(7)	673	291	2591798
593	21.9	0.0	1.6	chr3	62123303	62123427	(136172132)	C	AluJb	SINE/Alu	(69)	243	121	2591799
1847	22.7	3.4	6.9	chr3	65206299	65206822	(133088737)	C	MLT1F2	LTR/ERVL-MaLR	(34)	526	22	2597054
220	27.8	0.0	0.0	chr3	65320640	65320693	(132974866)	+	L2c	LINE/L2	3275	3328	(59)	2597238
1550	22.3	4.5	8.3	chr3	65320729	65321149	(132974410)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	157	2597244
1068	25.2	8.4	3.5	chr3	65361584	65361969	(132933590)	+	MLT1F2	LTR/ERVL-MaLR	1	422	(147)	2597320
350	30.9	2.0	1.0	chr3	65361974	65362071	(132933488)	C	L2a	LINE/L2	(34)	3392	3294	2597321
344	35.1	10.5	0.5	chr3	65362071	65362276	(132933283)	+	MIRc	SINE/MIR	20	248	(20)	2597322
1886	22.3	8.6	3.2	chr3	65933205	65933676	(132361883)	C	MLT1F	LTR/ERVL-MaLR	(44)	504	5	2598310
2345	22.4	4.4	4.7	chr3	66629880	66630431	(131665128)	+	MLT1F2	LTR/ERVL-MaLR	11	560	(0)	2599579
413	15.4	11.4	0.0	chr3	68882968	68883045	(129412514)	+	5S	rRNA	2	89	(32)	2603094
1452	22.8	10.2	5.6	chr3	68883044	68883564	(129411995)	C	MLT1E1	LTR/ERVL-MaLR	(43)	611	64	2603095
538	26.6	17.6	0.0	chr3	69618290	69618481	(128677078)	C	MIRb	SINE/MIR	(15)	253	21	2604499
1029	23.0	8.6	3.6	chr3	69618512	69618841	(128676718)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	333	2604500
304	20.8	1.9	20.3	chr3	69618881	69619013	(128676546)	C	MLT1E1A	LTR/ERVL-MaLR	(538)	142	35	2604500
1918	12.4	1.2	0.0	chr3	69668593	69668841	(128626718)	+	AluSx1	SINE/Alu	3	254	(58)	2604577
537	17.8	14.1	15.8	chr3	69668842	69669036	(128626523)	C	MLT1F2	LTR/ERVL-MaLR	(58)	502	306	2604576
351	28.4	1.9	0.0	chr3	69669111	69669212	(128626347)	C	MLT1F2	LTR/ERVL-MaLR	(399)	161	58	2604576
544	23.1	19.4	4.0	chr3	71973886	71974110	(126321449)	+	MLT2F	LTR/ERVL	396	663	(0)	2608192
1149	20.7	1.3	2.6	chr3	71974111	71974342	(126321217)	+	MLT1F1	LTR/ERVL-MaLR	341	569	(0)	2608191
358	29.3	4.8	3.7	chr3	71974375	71974566	(126320993)	+	L2a	LINE/L2	3175	3378	(48)	2608190
2351	21.8	6.2	2.1	chr3	72008636	72009160	(126286399)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	2608274
1965	19.3	16.0	1.7	chr3	72067738	72068217	(126227342)	+	MLT1F1	LTR/ERVL-MaLR	3	564	(5)	2608390
1614	24.6	8.1	10.5	chr3	72200464	72201004	(126094555)	+	MLT1F2	LTR/ERVL-MaLR	30	558	(2)	2608685
2357	20.1	6.9	1.9	chr3	72400886	72401423	(125894136)	+	MLT1F1	LTR/ERVL-MaLR	1	567	(2)	2609084
588	14.1	0.0	0.0	chr3	72401454	72401531	(125894028)	C	AluSq10	SINE/Alu	(235)	78	1	2609085
625	28.7	1.1	2.2	chr3	72541399	72541583	(125753976)	+	MLT1A	LTR/ERVL-MaLR	1	183	(191)	2609382
793	22.9	9.8	11.9	chr3	72541587	72542023	(125753536)	C	MLT1F2	LTR/ERVL-MaLR	(133)	427	1	2609383
2404	22.5	5.1	3.4	chr3	72675304	72675841	(125619718)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	2609706
766	15.9	2.3	2.7	chr3	72883305	72883440	(125412119)	C	AluJb	SINE/Alu	(168)	134	1	2610129
378	26.9	0.9	0.0	chr3	72883457	72883560	(125411999)	+	L1M5	LINE/L1	5042	5146	(1000)	2610127
1084	25.0	2.4	1.2	chr3	72883574	72883820	(125411739)	+	MLT1F2	LTR/ERVL-MaLR	311	560	(0)	2610130
1171	17.1	0.5	0.9	chr3	73166519	73166730	(125128829)	C	MLT1F1	LTR/ERVL-MaLR	(0)	548	338	2610746
1390	23.7	5.1	3.8	chr3	73166968	73167313	(125128246)	C	MLT1F1	LTR/ERVL-MaLR	(218)	351	1	2610746
536	28.5	9.8	2.0	chr3	73323310	73323506	(124972053)	+	MamRep1879	DNA/hAT-Tip100?	1	214	(2)	2611035
1288	22.5	8.7	1.5	chr3	73323540	73323910	(124971649)	+	MLT1F	LTR/ERVL-MaLR	182	572	(7)	2611036
523	23.5	15.9	1.4	chr3	78118961	78119265	(120176294)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	297	2617701
400	24.0	0.0	0.0	chr3	91298807	91298881	(106996678)	+	MLT1F2	LTR/ERVL-MaLR	1	75	(473)	2633046
924	26.1	3.6	3.2	chr3	91298973	91299221	(106996338)	+	MLT1F2	LTR/ERVL-MaLR	311	560	(0)	2633046
975	24.3	3.3	6.4	chr3	94169045	94169325	(104126234)	C	MLT1E1	LTR/ERVL-MaLR	(0)	654	383	2633953
3082	17.8	1.2	2.4	chr3	95096502	95097162	(103198397)	C	L1MA7	LINE/L1	(5)	6286	5634	2635069
12074	9.4	2.3	2.1	chr3	98110498	98111312	(100184247)	+	MER61-int	LTR/ERV1	1413	2237	(2980)	2638629
2085	14.5	0.3	0.3	chr3	98111313	98111615	(100183944)	C	AluSx1	SINE/Alu	(5)	307	5	2638630
20529	10.2	3.4	3.2	chr3	98111616	98112697	(100182862)	+	MER61-int	LTR/ERV1	2170	3311	(1906)	2638629
2738	21.5	1.5	1.6	chr3	100977263	100977806	(97317753)	C	MLT1F	LTR/ERVL-MaLR	(5)	543	1	2642402
1688	26.6	6.7	9.0	chr3	105228887	105229455	(93066104)	+	MLT1F2	LTR/ERVL-MaLR	1	555	(5)	2647996
1190	23.5	13.6	8.6	chr3	107270274	107270795	(91024764)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	9	2650597
792	16.7	8.1	2.1	chr3	107270797	107271029	(91024530)	C	BLACKJACK	DNA/hAT-Blackjack	(223)	2746	2499	2650598
980	23.8	26.8	2.2	chr3	119998151	119998556	(78297003)	+	MLT1F2	LTR/ERVL-MaLR	1	509	(51)	2668471
2223	11.8	0.0	0.0	chr3	125171992	125172288	(73123271)	+	AluSq2	SINE/Alu	1	297	(16)	2676562
33	11.9	0.0	0.0	chr3	125172303	125172357	(73123202)	+	(TC)n	Simple_repeat	1	55	(0)	2676563
1433	21.6	8.3	0.6	chr3	125172358	125172688	(73122871)	+	MLT1F	LTR/ERVL-MaLR	189	547	(1)	2676564
267	31.4	7.5	3.5	chr3	126106477	126106730	(72188829)	+	MLT1G1	LTR/ERVL-MaLR	42	306	(249)	2678134
287	29.1	10.6	5.9	chr3	126106711	126106845	(72188714)	+	MLT1G1	LTR/ERVL-MaLR	427	568	(11)	2678134
181	26.7	4.8	2.4	chr3	127547001	127547123	(70748436)	C	L2b	LINE/L2	(298)	3077	2952	2680225
15	23.1	1.6	4.8	chr3	127547478	127547538	(70748021)	+	G-rich	Low_complexity	1	62	(0)	2680226
2455	17.6	8.5	3.2	chr3	129420686	129421218	(68874341)	+	MLT1F1	LTR/ERVL-MaLR	1	564	(5)	2683722
338	26.3	5.7	9.7	chr3	130638103	130638340	(67657219)	C	HAL1	LINE/L1	(38)	2469	2240	2685767
4066	25.2	10.6	3.1	chr3	130638458	130639410	(67656149)	C	HAL1	LINE/L1	(660)	1847	806	2685767
353	20.0	3.5	0.1	chr3	130810853	130810945	(67484614)	C	LTR16	LTR/ERVL	(93)	358	264	2686024
703	22.7	8.3	11.8	chr3	130810944	130811308	(67484251)	+	MLT1H	LTR/ERVL-MaLR	199	549	(0)	2686025
2345	10.1	1.0	0.0	chr3	136746816	136747123	(61548436)	+	AluSp	SINE/Alu	2	312	(1)	2694993
1875	10.4	6.0	5.7	chr3	136747124	136747290	(61548269)	+	AluSx	SINE/Alu	140	301	(11)	2694992
1455	22.4	9.4	9.4	chr3	137063184	137063735	(61231824)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	9	2695574
1516	22.8	12.3	2.9	chr3	139523201	139523642	(58771917)	+	MLT1H2	LTR/ERVL-MaLR	1	489	(0)	2699458
2241	18.8	12.8	2.4	chr3	141815519	141815699	(56479860)	+	MLT1F2	LTR/ERVL-MaLR	1	190	(370)	2702918
40	0.0	0.0	0.0	chr3	141815700	141815733	(56479826)	+	(TG)n	Simple_repeat	1	34	(0)	2702919
2241	18.8	12.8	2.4	chr3	141815734	141816048	(56479511)	+	MLT1F2	LTR/ERVL-MaLR	191	556	(4)	2702918
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
1128	25.2	8.3	4.3	chr3	143231940	143232468	(55063091)	+	MLT1E1	LTR/ERVL-MaLR	2	654	(0)	2705390
292	27.3	13.2	0.0	chr3	143232469	143232567	(55062992)	+	MIRb	SINE/MIR	88	201	(67)	2705391
12	4.3	8.3	0.0	chr3	148442063	148442086	(49853473)	+	(AATAA)n	Simple_repeat	1	26	(0)	2712132
2222	20.8	14.2	3.1	chr3	148442194	148442768	(49852791)	C	MLT1E1	LTR/ERVL-MaLR	(0)	654	6	2712133
1256	25.8	5.1	8.5	chr3	150217670	150218241	(48077318)	+	MLT1F1	LTR/ERVL-MaLR	4	553	(16)	2714890
665	25.1	4.0	1.2	chr3	157703060	157703228	(40592331)	C	MIR	SINE/MIR	(0)	262	89	2725858
1777	22.4	8.9	7.2	chr3	157703229	157703771	(40591788)	+	MLT1F2	LTR/ERVL-MaLR	7	559	(1)	2725859
355	25.6	8.2	1.1	chr3	157703773	157703863	(40591696)	C	MIR	SINE/MIR	(163)	99	2	2725858
2506	21.3	2.5	6.4	chr3	160315954	160316530	(37979029)	+	MLT1F2	LTR/ERVL-MaLR	7	560	(0)	2729604
872	30.4	6.0	2.5	chr3	160316584	160317017	(37978542)	+	MLT1K	LTR/ERVL-MaLR	19	537	(58)	2729616
17	23.0	0.0	0.0	chr3	160755990	160756030	(37539529)	+	(GCT)n	Simple_repeat	1	41	(0)	2730312
2291	10.0	0.0	0.0	chr3	160906322	160906601	(37388958)	+	AluSc	SINE/Alu	1	280	(29)	2730547
33	0.0	0.0	0.0	chr3	160906603	160906633	(37388926)	+	(AAAGA)n	Simple_repeat	1	31	(0)	2730548
2035	23.5	5.8	8.9	chr3	160906634	160907104	(37388455)	C	MLT1F2	LTR/ERVL-MaLR	(97)	463	5	2730546
876	15.7	7.0	0.0	chr3	168002546	168002704	(30292855)	+	MER5B	DNA/hAT-Charlie	1	171	(7)	2739474
2614	19.4	5.8	1.3	chr3	168002924	168003466	(30292093)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	2739475
12	13.9	0.0	0.0	chr3	169769521	169769544	(28526015)	+	(GCC)n	Simple_repeat	1	24	(0)	2741786
1845	22.2	4.7	1.6	chr3	169843065	169843494	(28452065)	+	MLT1E2	LTR/ERVL-MaLR	111	554	(73)	2741903
666	18.5	4.4	0.0	chr3	169843497	169843626	(28451933)	+	L1PB4	LINE/L1	6012	6147	(9)	2741904
184	16.2	2.6	0.0	chr3	171458475	171458511	(26837048)	+	L3	LINE/CR1	1740	1777	(2322)	2744555
1133	21.5	3.2	0.0	chr3	171465743	171465951	(26829608)	C	MER20	DNA/hAT-Charlie	(0)	219	4	2744571
1207	19.7	26.5	3.0	chr3	171465952	171466234	(26829325)	+	MLT1F	LTR/ERVL-MaLR	204	548	(0)	2744570
4137	16.8	5.7	0.7	chr3	172230534	172231458	(26064101)	+	L1MB7	LINE/L1	5197	6171	(13)	2745788
13	10.0	0.0	0.0	chr3	172231557	172231578	(26063981)	+	(TGG)n	Simple_repeat	1	22	(0)	2745790
15	8.9	4.2	0.0	chr3	172231791	172231814	(26063745)	+	(GT)n	Simple_repeat	1	25	(0)	2745791
2309	11.6	0.0	0.0	chr3	172231880	172232180	(26063379)	C	AluSz	SINE/Alu	(11)	301	1	2745792
1508	23.5	4.8	2.9	chr3	173725601	173725986	(24569573)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	287	2747939
2285	13.1	2.1	1.1	chr3	174423442	174423818	(23871741)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2748958
1676	26.2	8.0	6.4	chr3	176103533	176104082	(22191477)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	2751245
276	33.3	2.0	11.7	chr3	177308891	177308993	(20986566)	+	Charlie15a	DNA/hAT-Charlie	136	224	(0)	2753028
562	27.1	10.2	1.8	chr3	177308992	177309216	(20986343)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	303	2753030
2154	22.6	1.4	2.7	chr3	177309278	177309772	(20985787)	C	L1ME1	LINE/L1	(6)	6346	5858	2753031
2272	24.6	5.0	3.4	chr3	182751822	182751958	(15543601)	+	HAL1	LINE/L1	928	1058	(1449)	2761518
2192	24.9	5.5	1.0	chr3	182751959	182752481	(15543078)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	2761519
2272	24.6	5.0	3.4	chr3	182752482	182753172	(15542387)	+	HAL1	LINE/L1	1059	1770	(737)	2761518
1057	25.3	15.7	1.7	chr3	185807582	185807995	(12487564)	+	MLT1F	LTR/ERVL-MaLR	16	498	(50)	2767127
785	19.3	0.0	2.2	chr3	185807999	185808133	(12487426)	+	FLAM_A	SINE/Alu	1	132	(10)	2767128
23	11.5	0.0	0.0	chr3	185808134	185808171	(12487388)	+	(AAGA)n	Simple_repeat	1	38	(0)	2767129
2477	8.3	0.0	0.0	chr3	185949212	185949512	(12346047)	+	AluSx	SINE/Alu	1	301	(11)	2767433
3545	6.0	0.0	0.7	chr3	185949808	185950258	(12345301)	+	LTR7	LTR/ERV1	1	448	(2)	2767434
813	24.8	6.2	12.1	chr3	187562205	187562626	(10732933)	C	MLT1F2	LTR/ERVL-MaLR	(0)	569	188	2770330
1939	16.2	5.2	6.3	chr3	187562630	187563056	(10732503)	C	MSTB1	LTR/ERVL-MaLR	(10)	422	1	2770331
258	32.5	11.6	3.8	chr3	195897838	195898099	(2397460)	+	L2	LINE/L2	2208	2492	(927)	2783805
14	12.0	0.0	3.5	chr3	195898188	195898216	(2397343)	+	(CTC)n	Simple_repeat	1	29	(0)	2783806
460	30.2	4.5	1.3	chr3	195898271	195898421	(2397138)	+	MIRb	SINE/MIR	32	187	(81)	2783807
17	7.7	0.0	3.3	chr3	198107976	198108005	(187554)	+	(GGAA)n	Simple_repeat	1	30	(0)	2788139
13	9.3	0.0	0.0	chr3	198108055	198108077	(187482)	+	(GGGA)n	Simple_repeat	1	23	(0)	2788140
18	6.8	3.2	0.0	chr3	198108147	198108177	(187382)	+	(GGGA)n	Simple_repeat	1	32	(0)	2788141
87	0.0	0.0	0.0	chr3	198108179	198108255	(187304)	+	(GGAA)n	Simple_repeat	1	77	(0)	2788142
24	10.9	0.0	0.0	chr3	198108307	198108346	(187213)	+	(GGGA)n	Simple_repeat	1	40	(0)	2788143
205	0.5	1.0	1.0	chr4	10001	10197	(190204358)	+	(ACCCTA)n	Simple_repeat	1	199	(0)	2788519
4151	15.9	5.9	18.2	chr4	10199	12822	(190201733)	C	TAR1	Satellite/telo	(238)	2302	1	2788520
513	23.0	14.8	1.8	chr4	710077	710293	(189504262)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	311	2789438
612	29.1	5.4	1.8	chr4	1254850	1255244	(188959311)	+	L1MEd	LINE/L1	1101	1510	(5576)	2790027
835	24.9	13.5	2.3	chr4	1255247	1255599	(188958956)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	160	2790029
2151	11.3	1.3	6.1	chr4	2094066	2094392	(188120163)	+	AluSx1	SINE/Alu	2	312	(0)	2791077
781	21.0	15.7	1.2	chr4	2094393	2094583	(188119972)	+	MLT1F2	LTR/ERVL-MaLR	325	559	(1)	2791076
291	26.5	8.7	0.0	chr4	2094585	2094720	(188119835)	C	L2a	LINE/L2	(262)	3164	3016	2791078
2299	10.8	0.0	0.7	chr4	2487273	2487577	(187726978)	C	AluSz6	SINE/Alu	(1)	311	9	2791643
1513	18.4	0.0	4.4	chr4	2487578	2487722	(187726833)	C	AluJb	SINE/Alu	(178)	134	1	2791642
13	14.4	3.2	0.0	chr4	2928339	2928369	(187286186)	+	(CCAGAC)n	Simple_repeat	1	32	(0)	2792453
19	22.9	0.0	0.0	chr4	2963881	2963926	(187250629)	+	(GCG)n	Simple_repeat	1	46	(0)	2792483
1467	24.2	8.5	2.2	chr4	4440796	4441355	(185773200)	C	MLT1F	LTR/ERVL-MaLR	(0)	595	3	2794734
2139	24.1	4.6	1.7	chr4	4595256	4595782	(185618773)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	6	2795020
286	27.5	7.7	1.6	chr4	6506500	6506621	(183707934)	C	L2a	LINE/L2	(264)	3162	3033	2798491
697	27.7	10.7	6.5	chr4	6506626	6507026	(183707529)	C	MLT1F	LTR/ERVL-MaLR	(0)	555	136	2798492
467	31.0	4.0	2.3	chr4	6507028	6507248	(183707307)	C	L2a	LINE/L2	(839)	2580	2356	2798491
270	36.1	2.7	2.0	chr4	6585312	6585458	(183629097)	+	MIRb	SINE/MIR	87	234	(34)	2798667
1108	23.9	17.2	2.4	chr4	6585574	6586040	(183628515)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	19	2798668
1850	9.8	8.0	4.2	chr4	6718672	6718958	(183495597)	+	AluY	SINE/Alu	1	299	(12)	2798934
598	25.8	5.4	3.4	chr4	6719010	6719246	(183495309)	+	L2a	LINE/L2	2660	2901	(518)	2798935
875	28.2	10.9	6.4	chr4	8502368	8502897	(181711658)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	2	2801835
319	26.8	2.8	0.8	chr4	8860437	8860546	(181354009)	C	MIR1_Amn	SINE/MIR	(81)	149	43	2802383
12	20.5	2.0	5.9	chr4	8860837	8860886	(181353669)	+	G-rich	Low_complexity	1	51	(0)	2802384
13	24.1	2.8	6.8	chr4	13544432	13544503	(176670052)	+	(GCG)n	Simple_repeat	1	74	(0)	2809468
1012	28.7	10.0	4.0	chr4	14522604	14523126	(175691429)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	3	2811085
15	16.2	2.2	4.3	chr4	16083668	16083712	(174130843)	+	(GCTCCC)n	Simple_repeat	1	46	(0)	2813765
1260	15.9	7.5	0.4	chr4	17471955	17472188	(172742367)	+	MLT1F	LTR/ERVL-MaLR	297	548	(0)	2816263
200	30.8	6.0	0.0	chr4	17472190	17472267	(172742288)	+	MER5A	DNA/hAT-Charlie	78	160	(29)	2816264
706	25.7	10.1	5.9	chr4	25870093	25870415	(164344140)	+	MLT1F	LTR/ERVL-MaLR	211	548	(0)	2829915
2447	20.3	5.4	1.6	chr4	26098531	26099030	(164115525)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	41	2830373
1813	21.0	11.2	1.1	chr4	26236308	26236750	(163977805)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	56	2830654
1558	28.3	3.2	2.5	chr4	29366777	29367302	(160847253)	+	MLT1F1	LTR/ERVL-MaLR	17	569	(0)	2835303
779	19.4	1.3	15.9	chr4	40325854	40325945	(149888610)	+	MER96B	DNA/hAT-Tip100	1	94	(323)	2851762
1724	16.3	0.0	5.9	chr4	40325946	40326252	(149888303)	C	AluJr	SINE/Alu	(23)	289	1	2851763
2784	19.7	3.0	4.2	chr4	41379035	41379602	(148834953)	C	MLT1F1	LTR/ERVL-MaLR	(8)	561	1	2853954
14	12.2	0.0	0.0	chr4	48779878	48779904	(141434651)	+	(GCGCC)n	Simple_repeat	1	27	(0)	2864375
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
47	0.0	0.0	0.0	chr4	49321339	49321381	(140893174)	+	(TCTG)n	Simple_repeat	1	43	(0)	2865127
43	9.0	0.0	0.0	chr4	49321431	49321489	(140893066)	+	(CA)n	Simple_repeat	1	59	(0)	2865128
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
285	26.1	0.0	1.8	chr4	49577533	49577634	(140636921)	C	HSAT5	Satellite	(1)	100	1	2865283
639	7.7	0.0	0.6	chr4	49577855	49577952	(140636603)	C	HSAT5	Satellite	(3)	97	1	2865284
887	26.1	18.1	4.8	chr4	52859703	52860178	(137354377)	+	MLT1H1	LTR/ERVL-MaLR	2	554	(1)	2866895
1446	25.6	8.8	9.6	chr4	57251547	57252111	(132962444)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	2874234
1316	27.3	15.0	3.6	chr4	57460143	57460421	(132754134)	+	MLT1F2	LTR/ERVL-MaLR	1	349	(211)	2874541
26	0.0	0.0	0.0	chr4	57460422	57460446	(132754109)	+	(GTGA)n	Simple_repeat	1	25	(0)	2874542
1316	27.3	15.0	3.6	chr4	57460447	57460660	(132753895)	+	MLT1F2	LTR/ERVL-MaLR	350	560	(0)	2874541
1804	29.2	3.6	6.3	chr4	57890470	57891043	(132323512)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	1	2875095
1867	20.9	12.0	7.7	chr4	67680630	67681163	(122533392)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	2887306
1415	21.6	8.2	4.7	chr4	67681164	67681440	(122533115)	+	L1MC5	LINE/L1	9004	9287	(17)	2887305
2529	19.5	7.2	2.9	chr4	73571942	73572377	(116642178)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	110	2895071
199	31.3	9.3	9.9	chr4	75754383	75754694	(114459861)	+	L2	LINE/L2	2275	2584	(835)	2898022
1650	22.6	9.6	0.7	chr4	75754815	75755317	(114459238)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	8	2898023
604	23.8	8.2	9.2	chr4	81635981	81636224	(108578331)	+	MIRb	SINE/MIR	29	258	(4)	2906419
2320	10.2	0.0	0.0	chr4	82974455	82974739	(107239816)	+	AluSx	SINE/Alu	1	285	(27)	2908577
1017	10.0	1.4	1.4	chr4	82974740	82974879	(107239676)	+	AluSx3	SINE/Alu	163	302	(9)	2908578
1191	14.6	0.4	5.8	chr4	82974880	82975075	(107239480)	+	L1MB3	LINE/L1	5950	6133	(50)	2908576
1945	12.1	7.5	0.0	chr4	82975076	82975348	(107239207)	+	AluSz	SINE/Alu	1	295	(17)	2908579
1311	26.1	17.0	3.3	chr4	83629693	83630171	(106584384)	+	MLT1F2	LTR/ERVL-MaLR	1	558	(2)	2909908
351	30.0	2.9	2.0	chr4	83630172	83630219	(106584336)	+	MIRc	SINE/MIR	73	119	(149)	2909907
13	17.6	2.5	2.4	chr4	87006836	87006876	(103207679)	+	(CTGCCGC)n	Simple_repeat	1	41	(0)	2914790
1972	20.4	13.4	2.8	chr4	95466799	95467303	(94747252)	+	MLT1F1	LTR/ERVL-MaLR	3	569	(0)	2926471
1922	25.3	5.1	1.0	chr4	95808427	95808949	(94405606)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	1	2926854
578	31.3	5.5	5.1	chr4	106877413	106877685	(83336870)	+	MLT1E1A	LTR/ERVL-MaLR	282	555	(125)	2941360
1811	26.5	8.3	2.8	chr4	106877732	106878344	(83336211)	C	L1MC4	LINE/L1	(935)	7107	6458	2941361
14	13.9	3.1	0.0	chr4	112514924	112514955	(77699600)	+	(CGCCCC)n	Simple_repeat	1	33	(0)	2949283
2240	24.7	2.3	5.7	chr4	113802792	113803367	(76411188)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	3	2951304
12	21.7	0.0	0.0	chr4	114598686	114598717	(75615838)	+	G-rich	Low_complexity	1	32	(0)	2952251
942	25.9	1.3	11.9	chr4	117492485	117492914	(72721641)	+	MLT1E1A	LTR/ERVL-MaLR	50	518	(162)	2955763
2176	19.1	12.7	2.9	chr4	118276081	118276592	(71937963)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	2956654
399	24.1	8.4	3.9	chr4	118361490	118361641	(71852914)	+	Charlie8	DNA/hAT-Charlie	139	320	(10)	2956777
1852	23.1	9.7	1.2	chr4	118361753	118362251	(71852304)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	3	2956778
1915	14.5	3.6	9.0	chr4	119534228	119534584	(70679971)	+	MER1B	DNA/hAT-Charlie	3	339	(0)	2958601
34	5.6	0.0	0.0	chr4	125315055	125315092	(64899463)	+	(TG)n	Simple_repeat	1	38	(0)	2966465
1399	27.8	9.5	2.5	chr4	133207847	133208363	(57006192)	+	MLT1F2	LTR/ERVL-MaLR	4	560	(0)	2976703
2521	17.7	9.0	1.0	chr4	139873438	139873946	(50340609)	+	MLT1F1	LTR/ERVL-MaLR	14	567	(2)	2985383
1193	26.7	4.1	7.8	chr4	142341499	142342082	(47872473)	+	MLT1E2	LTR/ERVL-MaLR	17	603	(24)	2988829
332	29.9	8.8	1.5	chr4	142342083	142342218	(47872337)	+	MIRb	SINE/MIR	112	258	(10)	2988830
1568	26.1	8.9	0.8	chr4	150637406	150637919	(39576636)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3000027
947	28.4	2.4	7.3	chr4	150637920	150638107	(39576448)	C	L1M5	LINE/L1	(1471)	4675	4513	3000014
5094	16.2	8.9	1.3	chr4	152504952	152505743	(37708812)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	345	3003079
1960	12.2	0.4	0.0	chr4	152505744	152506006	(37708549)	C	AluSz6	SINE/Alu	(14)	298	35	3003080
1285	26.1	10.2	7.7	chr4	155169529	155170071	(35044484)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	1	3007023
1867	23.5	7.7	3.0	chr4	156737890	156738419	(33476136)	+	MLT1F1	LTR/ERVL-MaLR	13	569	(0)	3009196
1438	26.8	8.1	7.6	chr4	157971760	157972309	(32242246)	+	MLT1F2	LTR/ERVL-MaLR	5	557	(3)	3010765
1271	24.2	16.3	7.0	chr4	164712242	164712754	(25501801)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	3019748
761	19.2	1.2	3.0	chr4	168748196	168748361	(21466194)	+	MER5A	DNA/hAT-Charlie	1	163	(26)	3025265
1527	22.2	1.7	6.2	chr4	168748481	168748903	(21465652)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	277	3025266
1977	24.0	4.8	4.3	chr4	173977493	173978027	(16236528)	+	MLT1F	LTR/ERVL-MaLR	1	538	(10)	3032337
4685	28.0	22.6	3.6	chr4	174189309	174189649	(16024906)	C	HERVL40-int	LTR/ERVL	(1575)	3955	3554	3032626
1819	16.8	0.8	14.8	chr4	174189650	174190103	(16024452)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	3032627
1484	25.9	9.8	10.0	chr4	174462916	174463476	(15751079)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	3032995
236	16.4	3.2	3.2	chr4	182645454	182645516	(7569039)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	349	3043736
1631	25.5	8.2	2.3	chr4	182645537	182645970	(7568585)	C	MLT1F2	LTR/ERVL-MaLR	(98)	462	1	3043737
541	31.2	13.2	2.9	chr4	182645971	182646245	(7568310)	C	MLT1I	LTR/ERVL-MaLR	(57)	354	47	3043736
15	13.3	7.3	0.0	chr4	183504266	183504306	(6710249)	+	(CGCACGC)n	Simple_repeat	1	44	(0)	3045071
14	3.6	6.7	3.1	chr4	183504426	183504455	(6710100)	+	(CGGAG)n	Simple_repeat	1	32	(0)	3045072
1951	22.9	11.6	6.7	chr4	183792785	183793179	(6421376)	+	MLT1F2	LTR/ERVL-MaLR	11	438	(122)	3045625
2527	14.3	4.2	0.0	chr4	183793180	183793585	(6420970)	C	MSTA	LTR/ERVL-MaLR	(0)	428	5	3045626
253	6.5	0.0	0.0	chr4	184079495	184079525	(6135030)	+	AluJo	SINE/Alu	259	289	(23)	3046015
1047	23.2	12.4	2.9	chr4	184079566	184079986	(6134569)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	3046016
242	17.1	0.0	0.0	chr4	184264167	184264207	(5950348)	+	MER91A	DNA/hAT-Tip100	39	79	(117)	3046275
1403	21.9	9.2	9.4	chr4	184391241	184391760	(5822795)	+	MLT1F2	LTR/ERVL-MaLR	4	522	(38)	3046480
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
2125	0.2	0.0	0.3	chr5	10001	11835	(181526424)	+	(TAACCC)n	Simple_repeat	1	1835	(0)	3054965
952	20.9	4.8	0.0	chr5	589312	589550	(180948709)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	319	3055546
294	6.5	0.0	0.0	chr5	589563	589608	(180948651)	C	MADE1	DNA/TcMar-Mariner	(34)	46	1	3055547
850	27.7	1.8	6.4	chr5	1901629	1901925	(179636334)	C	MLT1F2	LTR/ERVL-MaLR	(0)	680	309	3056753
252	33.6	7.6	0.0	chr5	1901922	1902067	(179636192)	+	MLT1L	LTR/ERVL-MaLR	202	359	(251)	3056754
1928	25.0	3.2	0.6	chr5	6471217	6471760	(175066499)	C	MLT1F2	LTR/ERVL-MaLR	(1)	559	1	3061906
969	25.8	7.6	5.3	chr5	9459196	9459749	(172078510)	+	MLT1E2	LTR/ERVL-MaLR	6	605	(22)	3065522
265	30.1	7.3	1.3	chr5	10353088	10353242	(171185017)	C	MamTip3	DNA/hAT-Tip100	(312)	188	24	3066755
1252	25.2	5.5	12.1	chr5	13828434	13829003	(167709256)	+	MLT1E1A	LTR/ERVL-MaLR	31	680	(0)	3071341
181	31.7	11.1	3.2	chr5	14154524	14154647	(167383612)	C	MamRTE1	LINE/RTE-BovB	(3530)	282	148	3071871
2611	19.7	5.0	0.0	chr5	14690332	14690843	(166847416)	C	MLT1F1	LTR/ERVL-MaLR	(29)	540	2	3072542
456	16.0	10.7	8.8	chr5	16445580	16445716	(165092543)	+	MIR	SINE/MIR	79	218	(44)	3075004
593	25.4	18.6	3.5	chr5	16445803	16446292	(165091967)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	11	3075005
2702	15.3	9.0	2.8	chr5	19331005	19331543	(162206716)	+	L1PB4	LINE/L1	5581	6156	(0)	3079212
589	29.4	2.5	3.5	chr5	19331565	19331786	(162206473)	C	MLT1E2	LTR/ERVL-MaLR	(146)	534	295	3079210
856	24.4	5.0	6.6	chr5	19872294	19872816	(161665443)	+	MLT1E2	LTR/ERVL-MaLR	58	627	(0)	3079903
15	21.8	0.0	0.0	chr5	22853073	22853109	(158685150)	+	(GCA)n	Simple_repeat	1	37	(0)	3083982
2600	22.3	3.2	0.0	chr5	34507700	34508250	(147030009)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	3099891
2761	22.3	0.5	5.8	chr5	36778299	36778899	(144759360)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	3103330
19	4.0	0.0	0.0	chr5	36877200	36877225	(144661034)	+	(CGG)n	Simple_repeat	1	26	(0)	3103488
989	24.2	9.2	4.7	chr5	37936849	37937147	(143601112)	C	MLT1F	LTR/ERVL-MaLR	(23)	525	212	3105280
1417	26.1	10.2	4.2	chr5	40240007	40240509	(141297750)	+	MLT1F	LTR/ERVL-MaLR	12	548	(0)	3108676
690	18.9	5.1	0.7	chr5	40240798	40240946	(141297313)	+	MLT1H1	LTR/ERVL-MaLR	1	156	(399)	3108677
1108	27.3	10.2	11.4	chr5	42682848	42682992	(138855267)	C	MLT1F2	LTR/ERVL-MaLR	(111)	449	310	3111934
2314	12.1	0.0	0.0	chr5	42682993	42683299	(138854960)	C	AluSc	SINE/Alu	(2)	307	1	3111935
2391	19.2	9.2	0.6	chr5	43371326	43371812	(138166447)	+	MLT1F	LTR/ERVL-MaLR	9	541	(7)	3112982
934	12.6	10.7	6.4	chr5	43481691	43481835	(138056424)	+	MLT1F	LTR/ERVL-MaLR	326	489	(59)	3113165
2530	6.8	0.0	0.3	chr5	43481836	43482142	(138056117)	C	AluY	SINE/Alu	(5)	306	1	3113166
2471	9.1	0.0	0.0	chr5	56002145	56002451	(125535808)	+	AluSg7	SINE/Alu	1	307	(2)	3124245
1404	17.9	12.4	8.1	chr5	56002452	56002699	(125535560)	+	MLT1E1A	LTR/ERVL-MaLR	429	680	(0)	3124244
12	17.6	4.0	5.8	chr5	56951820	56951869	(124586390)	+	(GCCG)n	Simple_repeat	1	52	(0)	3125802
3220	21.4	0.7	0.9	chr5	56969116	56969685	(124568574)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	3125836
952	24.7	4.5	3.2	chr5	56969686	56969923	(124568336)	C	L1M5	LINE/L1	(2102)	4044	3796	3125833
215	33.3	1.4	0.0	chr5	58905772	58905843	(122632416)	+	MIR3	SINE/MIR	38	110	(98)	3128778
2474	23.1	1.3	5.0	chr5	58906083	58906662	(122631597)	+	MLT1F2	LTR/ERVL-MaLR	1	558	(2)	3128779
1064	16.8	9.3	0.5	chr5	62214897	62215093	(119323166)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	354	3133374
20	0.0	0.0	0.0	chr5	62215106	62215127	(119323132)	+	(A)n	Simple_repeat	1	22	(0)	3133375
817	22.1	5.8	3.3	chr5	62215128	62215316	(119322943)	C	MLT1F1	LTR/ERVL-MaLR	(229)	215	11	3133374
5133	14.8	2.0	1.1	chr5	62215317	62216202	(119322057)	C	L1MB2	LINE/L1	(9)	6162	5257	3133376
920	27.6	10.0	7.4	chr5	65454484	65454996	(116083263)	+	MLT1F2	LTR/ERVL-MaLR	3	647	(6)	3137843
1568	22.6	13.1	6.7	chr5	66651597	66652107	(114886152)	C	MLT1F2	LTR/ERVL-MaLR	(11)	549	1	3139753
1455	22.2	5.5	2.8	chr5	67270160	67270586	(114267673)	C	LTR87	LTR/ERVL?	(1)	623	185	3140593
1192	24.5	9.8	9.8	chr5	67270692	67271170	(114267089)	+	MLT1F2	LTR/ERVL-MaLR	60	538	(22)	3140594
381	26.8	1.8	8.9	chr5	67271171	67271293	(114266966)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	3140595
248	22.6	3.6	0.0	chr5	68312448	68312500	(113225759)	+	MLT1F	LTR/ERVL-MaLR	12	66	(494)	3142047
1442	21.7	3.9	0.0	chr5	68312539	68312833	(113225426)	+	MLT1F	LTR/ERVL-MaLR	200	506	(42)	3142047
408	34.7	4.3	2.9	chr5	68312843	68313047	(113225212)	C	MIRc	SINE/MIR	(56)	212	5	3142048
238	27.8	3.2	3.2	chr5	68456531	68456623	(113081636)	C	MER34A	LTR/ERV1	(438)	133	41	3142276
2125	21.6	10.0	0.4	chr5	69231816	69232303	(112305956)	C	MLT1F	LTR/ERVL-MaLR	(8)	540	1	3143566
921	22.0	2.0	2.9	chr5	71905495	71905700	(109632559)	C	MLT1F2	LTR/ERVL-MaLR	(15)	545	342	3148225
655	24.4	3.4	3.8	chr5	71907600	71907656	(109630603)	+	L1MCc	LINE/L1	1212	1265	(5158)	3148228
1878	22.9	7.8	9.3	chr5	71907657	71908225	(109630034)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	3148229
2668	19.6	6.4	1.9	chr5	72374431	72374951	(109163308)	+	MLT1F	LTR/ERVL-MaLR	3	548	(0)	3148897
1858	19.7	16.0	1.1	chr5	73117360	73117831	(108420428)	+	MLT1F1	LTR/ERVL-MaLR	14	569	(0)	3150023
599	25.0	11.1	0.5	chr5	73117832	73118032	(108420227)	+	L2a	LINE/L2	3097	3321	(105)	3150022
2454	20.2	9.3	0.2	chr5	73386037	73386532	(108151727)	+	MLT1F	LTR/ERVL-MaLR	1	546	(2)	3150404
1871	23.3	11.1	3.1	chr5	74188960	74189473	(107348786)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	3151623
1372	24.4	9.4	8.6	chr5	75140497	75140986	(106397273)	+	MLT1F2	LTR/ERVL-MaLR	3	498	(62)	3153113
682	13.9	0.0	1.9	chr5	75140994	75141096	(106397163)	+	MER5A	DNA/hAT-Charlie	89	189	(0)	3153114
595	26.4	6.2	4.4	chr5	77783660	77783847	(103754412)	+	ERVL-E-int	LTR/ERVL	3945	4141	(1573)	3157172
1983	24.2	10.5	1.2	chr5	77783848	77784354	(103753905)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3157173
901	20.8	0.6	0.6	chr5	80608298	80608465	(100929794)	+	FRAM	SINE/Alu	1	168	(8)	3161895
2706	15.0	7.2	8.2	chr5	80608466	80608575	(100929684)	C	MLT2B4	LTR/ERVL	(457)	99	1	3161894
1432	25.0	1.7	4.8	chr5	80608579	80609126	(100929133)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	1	3161896
3643	18.3	2.0	10.3	chr5	92512927	92513507	(89024752)	C	LTR8B	LTR/ERV1	(0)	820	321	3177552
1813	16.8	0.7	0.3	chr5	92513508	92513798	(89024461)	+	AluSx1	SINE/Alu	21	312	(0)	3177553
17	12.7	0.0	0.0	chr5	93082988	93083013	(88455246)	+	(TG)n	Simple_repeat	1	26	(0)	3178249
1288	22.4	11.3	4.4	chr5	93083065	93083424	(88454835)	+	MLT1E1A	LTR/ERVL-MaLR	293	680	(0)	3178250
1633	25.5	11.0	0.2	chr5	94085230	94085716	(87452543)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	1	3179425
683	30.6	4.8	9.1	chr5	96037655	96038136	(85500123)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	96	3182033
2364	9.3	4.1	2.3	chr5	104064085	104064469	(77473790)	C	HERVH-int	LTR/ERV1	(0)	7713	7322	3192265
4338	12.6	1.4	2.4	chr5	106535043	106535532	(75002727)	C	L1PA13	LINE/L1	(19)	6144	5656	3195260
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
1919	21.4	5.0	16.4	chr5	107821946	107822581	(73715678)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3196840
1015	30.1	5.4	6.5	chr5	109792565	109793069	(71745190)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	81	3199469
333	27.5	8.4	0.0	chr5	109793148	109793256	(71745003)	C	MLT1G1-int	LTR/ERVL-MaLR	(23)	1466	1348	3199469
272	12.2	2.4	0.0	chr5	109793249	109793289	(71744970)	C	MLT1F	LTR/ERVL-MaLR	(218)	330	289	3199470
604	29.9	5.3	4.0	chr5	110170462	110170818	(71367441)	C	MLT1F2	LTR/ERVL-MaLR	(0)	505	97	3199948
1540	23.3	6.8	9.2	chr5	124043321	124043883	(57494376)	+	MLT1F2	LTR/ERVL-MaLR	1	548	(12)	3218152
279	26.1	6.3	7.0	chr5	124043894	124044021	(57494238)	C	L1M5	LINE/L1	(318)	5806	5680	3218153
1364	24.2	5.5	9.0	chr5	127690708	127691139	(53847120)	+	MLT1F2	LTR/ERVL-MaLR	1	416	(144)	3223172
15	23.5	1.5	5.9	chr5	127691259	127691325	(53846934)	+	(TATTATA)n	Simple_repeat	1	68	(0)	3223173
906	27.6	15.2	0.6	chr5	131155591	131155911	(50382348)	C	MLT1J2	LTR/ERVL-MaLR	(36)	412	37	3227428
1292	19.3	9.9	1.9	chr5	131155930	131156246	(50382013)	C	MLT1F	LTR/ERVL-MaLR	(4)	544	200	3227429
239	13.5	0.0	0.0	chr5	131156250	131156286	(50381973)	C	MLT1A0	LTR/ERVL-MaLR	(3)	362	326	3227430
1283	15.8	4.7	2.4	chr5	131156287	131156495	(50381764)	+	AluJb	SINE/Alu	86	299	(13)	3227431
17	24.2	1.6	3.2	chr5	132369671	132369732	(49168527)	+	(CCCGC)n	Simple_repeat	1	63	(0)	3229279
1121	26.4	11.1	3.4	chr5	133433506	133434269	(48103990)	C	L2a	LINE/L2	(1)	3425	2582	3230957
2138	23.1	5.0	0.9	chr5	133733665	133734207	(47804052)	C	MLT1F1	LTR/ERVL-MaLR	(3)	566	1	3231327
366	29.3	7.5	6.6	chr5	136155613	136155901	(45382358)	+	L2a	LINE/L2	3001	3423	(3)	3235310
1244	26.2	14.4	1.5	chr5	136155926	136156406	(45381853)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	7	3235311
297	27.5	0.9	6.8	chr5	138721001	138721117	(42817142)	+	LTR16C	LTR/ERVL	99	208	(281)	3239449
977	22.7	15.2	7.2	chr5	138721200	138721371	(42816888)	C	MLT1F	LTR/ERVL-MaLR	(177)	371	162	3239446
2407	8.5	0.0	0.0	chr5	138721372	138721664	(42816595)	C	AluY	SINE/Alu	(18)	293	1	3239450
1178	19.0	12.9	2.3	chr5	144132139	144132579	(37405680)	C	MLT1F	LTR/ERVL-MaLR	(15)	533	1	3248805
1973	20.9	13.0	0.6	chr5	145786227	145786716	(35751543)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3251280
1399	23.4	8.3	5.6	chr5	145973893	145974442	(35563817)	C	MLT1E1A	LTR/ERVL-MaLR	(3)	677	3	3251629
451	32.5	7.3	2.1	chr5	150861542	150861827	(30676432)	+	MLT1I-int	LTR/ERVL-MaLR	1086	1387	(0)	3260796
1566	26.9	5.7	4.5	chr5	150861890	150862442	(30675817)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	3260797
2435	21.6	4.4	2.1	chr5	151752861	151753390	(29784869)	+	MLT1F	LTR/ERVL-MaLR	6	548	(0)	3262570
2649	19.7	7.0	0.0	chr5	154676046	154676553	(26861706)	+	MLT1F	LTR/ERVL-MaLR	1	546	(2)	3267755
1335	27.3	8.5	2.1	chr5	158377475	158377991	(23160268)	+	MLT1F2	LTR/ERVL-MaLR	8	560	(0)	3274495
345	34.2	1.7	7.1	chr5	158377993	158378244	(23160015)	+	L1M2	LINE/L1	4984	5221	(922)	3274496
1267	21.9	3.6	0.4	chr5	158555671	158555980	(22982279)	+	MLT1F1	LTR/ERVL-MaLR	194	558	(11)	3274797
1469	20.1	14.0	0.6	chr5	158960595	158960935	(22577324)	+	MLT1F1	LTR/ERVL-MaLR	3	396	(173)	3275376
791	26.6	12.8	3.9	chr5	158961004	158961708	(22576551)	+	L1ME4a	LINE/L1	5313	6112	(12)	3275375
2450	22.4	3.6	8.2	chr5	159583366	159583953	(21954306)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3276396
1827	26.4	7.4	5.2	chr5	165931490	165932032	(15606227)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	3	3285999
1611	21.8	1.2	2.9	chr5	169109257	169109597	(12428662)	+	MLT1E1A	LTR/ERVL-MaLR	346	680	(0)	3291259
2097	22.8	4.3	5.6	chr5	171833170	171833737	(9704522)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3296129
279	28.0	2.0	2.9	chr5	171858433	171858535	(9679724)	+	L2c	LINE/L2	3269	3370	(17)	3296186
203	26.9	11.9	0.9	chr5	171859060	171859164	(9679095)	+	MIRb	SINE/MIR	119	236	(32)	3296187
2712	19.2	2.9	1.7	chr5	173579190	173579729	(7958530)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	2	3299865
804	30.4	5.6	1.1	chr5	173873813	173874171	(7664088)	C	L1ME4a	LINE/L1	(203)	5921	5546	3300484
1830	13.6	1.8	1.8	chr5	173941613	173941885	(7596374)	+	AluSz	SINE/Alu	23	295	(17)	3300603
193	33.4	18.7	2.4	chr5	173941891	173942273	(7595986)	+	L2c	LINE/L2	2924	3383	(4)	3300604
1652	22.4	11.2	2.2	chr5	174378454	174378956	(7159303)	C	MLT1F2	LTR/ERVL-MaLR	(6)	554	1	3301394
1611	23.1	6.7	5.1	chr5	174614302	174614866	(6923393)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	5	3301848
586	25.4	5.3	2.2	chr5	174796365	174796545	(6741714)	+	MER103C	DNA/hAT-Charlie	63	249	(48)	3302259
214	27.6	5.0	3.8	chr5	174796629	174796707	(6741552)	C	MIRb	SINE/MIR	(70)	198	119	3302260
1898	22.0	2.5	2.5	chr5	175646191	175646586	(5891673)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3303835
1559	23.0	8.2	7.7	chr5	175646587	175646791	(5891468)	+	MLT1F2	LTR/ERVL-MaLR	359	559	(1)	3303834
950	19.1	3.5	0.0	chr5	175889121	175889288	(5648971)	+	AluJr	SINE/Alu	129	302	(10)	3304345
2364	19.5	5.3	0.6	chr5	175889289	175889758	(5648501)	C	MLT1F	LTR/ERVL-MaLR	(30)	518	26	3304346
301	27.8	13.5	0.0	chr5	176415551	176415718	(5122541)	+	MIRb	SINE/MIR	44	247	(21)	3305204
2390	11.0	0.0	0.3	chr5	177568107	177568415	(3969844)	+	AluSx1	SINE/Alu	1	308	(4)	3307646
1093	19.7	8.2	6.2	chr5	177568416	177568533	(3969726)	C	MLT1F	LTR/ERVL-MaLR	(171)	377	245	3307645
579	23.5	3.4	0.0	chr5	177568526	177568640	(3969619)	C	MLT1F	LTR/ERVL-MaLR	(426)	122	4	3307645
2384	9.4	0.0	0.0	chr5	177568785	177569083	(3969176)	+	AluY	SINE/Alu	1	299	(12)	3307647
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
252	24.1	13.8	0.0	chr5	179162233	179162344	(2375915)	+	MLT1K	LTR/ERVL-MaLR	121	250	(345)	3310435
286	27.5	11.2	7.9	chr5	179162449	179162689	(2375570)	C	MLT1F2	LTR/ERVL-MaLR	(162)	398	149	3310436
225	25.9	1.7	0.0	chr5	179162703	179162760	(2375499)	C	MLT1F2	LTR/ERVL-MaLR	(500)	60	2	3310436
235	28.8	0.0	1.5	chr5	179162783	179162849	(2375410)	+	MLT1K	LTR/ERVL-MaLR	518	583	(12)	3310435
743	25.9	0.8	10.1	chr5	180397008	180397295	(1140964)	C	MLT1F2	LTR/ERVL-MaLR	(185)	375	115	3312561
2421	6.5	0.0	3.1	chr5	180397302	180397622	(1140637)	C	AluY	SINE/Alu	(0)	311	1	3312562
439	27.4	6.4	2.8	chr6	1381085	1381264	(169424715)	+	L1MC5a	LINE/L1	2589	2775	(2)	3316027
2408	18.4	2.3	3.4	chr6	3359400	3360290	(167445689)	+	L1MB3	LINE/L1	5354	6183	(0)	3318780
1612	23.3	10.8	5.8	chr6	5929764	5930278	(164875701)	+	MLT1E1A	LTR/ERVL-MaLR	137	680	(0)	3322768
859	25.1	8.0	9.3	chr6	5930279	5930674	(164875305)	+	LTR16	LTR/ERVL	45	434	(4)	3322769
2286	16.9	14.8	2.2	chr6	7037448	7037943	(163768036)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	3324453
2418	24.8	2.9	6.0	chr6	7710805	7711374	(163094605)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	9	3325617
1326	16.2	0.9	0.0	chr6	10828808	10829023	(159976956)	+	MLT1B	LTR/ERVL-MaLR	169	386	(4)	3330277
1375	15.0	2.6	0.9	chr6	10829024	10829245	(159976734)	+	MLT1F	LTR/ERVL-MaLR	315	540	(8)	3330279
1745	21.8	15.7	4.8	chr6	11690344	11690945	(159115034)	+	MLT1E1A	LTR/ERVL-MaLR	1	680	(0)	3331595
693	21.1	0.0	0.0	chr6	11690946	11691059	(159114920)	+	FLAM_A	SINE/Alu	2	115	(27)	3331596
344	25.9	11.2	1.2	chr6	12837641	12837800	(157968179)	+	MIRb	SINE/MIR	63	240	(28)	3333271
1138	21.7	13.2	4.6	chr6	12837809	12838297	(157967682)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	10	3333272
2497	25.9	1.6	0.4	chr6	14596296	14596857	(156209122)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	3336246
383	22.7	7.0	0.8	chr6	15683348	15683467	(155122512)	C	L2c	LINE/L2	(0)	3387	3260	3338251
930	20.8	8.7	1.3	chr6	16142428	16142661	(154663318)	C	MLT1F2	LTR/ERVL-MaLR	(4)	556	304	3339054
2117	24.1	8.9	2.7	chr6	16661511	16662034	(154143945)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3339868
2581	6.0	0.0	0.0	chr6	17698458	17698756	(153107223)	+	AluY	SINE/Alu	2	300	(11)	3341620
1464	14.0	9.1	2.5	chr6	17698757	17698888	(153107091)	+	AluSz	SINE/Alu	154	300	(12)	3341619
2253	21.1	7.5	6.3	chr6	18085049	18085600	(152720379)	+	MLT1F2	LTR/ERVL-MaLR	1	559	(1)	3342405
1320	14.3	17.9	1.2	chr6	18302706	18302956	(152503023)	C	AluJr	SINE/Alu	(10)	302	1	3342823
1698	23.9	8.9	6.5	chr6	20824280	20824816	(149981163)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	10	3346680
279	5.7	0.0	0.0	chr6	20913065	20913099	(149892880)	C	MLT2C1	LTR/ERVL	(0)	563	529	3346830
50	0.0	0.0	0.0	chr6	20913117	20913159	(149892820)	+	(AC)n	Simple_repeat	1	43	(0)	3346831
1005	21.4	11.3	10.2	chr6	20913160	20913482	(149892497)	C	MLT1F2	LTR/ERVL-MaLR	(30)	530	204	3346832
832	28.4	13.3	3.9	chr6	21217922	21218327	(149587652)	C	L1ME3Cz	LINE/L1	(969)	28	7	3347295
2577	19.0	4.1	6.6	chr6	21218341	21218915	(149587064)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	3347298
2195	12.9	0.0	0.7	chr6	25263391	25263692	(145542287)	+	AluSx3	SINE/Alu	2	301	(10)	3353344
21	18.4	0.0	2.0	chr6	27251567	27251617	(143554362)	+	G-rich	Low_complexity	1	51	(0)	3356580
556	23.8	7.4	1.0	chr6	27252055	27252249	(143553730)	+	MIRb	SINE/MIR	26	243	(25)	3356581
1332	22.9	8.6	9.2	chr6	28320705	28321171	(142484808)	+	MLT1F2	LTR/ERVL-MaLR	97	560	(0)	3358443
2173	19.8	10.2	0.3	chr6	28321175	28321746	(142484233)	+	L1MC5	LINE/L1	7833	8467	(837)	3358444
624	1.2	0.0	20.8	chr6	28941053	28941158	(141864821)	+	tRNA-Leu-TTG	tRNA	1	84	(2)	3359510
2291	22.7	11.3	0.9	chr6	29796350	29797149	(141008830)	+	Charlie9	DNA/hAT-Charlie	1280	2173	(584)	3360669
2179	23.5	5.0	1.8	chr6	29797148	29797693	(141008286)	+	MLT1F1	LTR/ERVL-MaLR	6	569	(0)	3360670
2041	11.6	1.1	0.0	chr6	29953431	29953753	(140852226)	+	AluSx	SINE/Alu	3	312	(0)	3360881
1949	24.9	3.6	4.8	chr6	29953754	29954153	(140851826)	+	MLT1F1	LTR/ERVL-MaLR	169	568	(1)	3360880
1253	25.5	14.5	7.3	chr6	31304718	31305221	(139500758)	+	MLT1F2	LTR/ERVL-MaLR	11	556	(4)	3363151
306	18.0	8.3	1.0	chr6	35352484	35352584	(135453395)	C	Charlie1a	DNA/hAT-Charlie	(1101)	354	246	3370184
875	26.2	10.9	6.2	chr6	35352575	35353029	(135452950)	C	MLT1F	LTR/ERVL-MaLR	(68)	480	2	3370188
2722	5.3	0.7	0.0	chr6	36027061	36027361	(134778618)	C	AluSp	SINE/Alu	(10)	303	1	3371676
2708	16.1	5.5	5.4	chr6	38631346	38631846	(132174133)	+	MLT1F1	LTR/ERVL-MaLR	3	515	(54)	3376670
2373	7.5	0.3	0.0	chr6	38631847	38632138	(132173841)	+	AluSp	SINE/Alu	1	293	(20)	3376671
1807	23.0	5.6	6.2	chr6	40684963	40685524	(130120455)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	1	3379917
1055	22.2	12.3	2.0	chr6	41020347	41020645	(129785334)	+	MLT1F	LTR/ERVL-MaLR	215	548	(0)	3380499
1570	21.7	4.8	5.8	chr6	42169128	42169630	(128636349)	+	MLT1E1A	LTR/ERVL-MaLR	11	621	(59)	3382700
2206	9.8	0.3	0.3	chr6	42169631	42169915	(128636064)	+	AluSp	SINE/Alu	1	285	(28)	3382701
217	20.0	4.8	1.6	chr6	42367801	42367861	(128438118)	C	MIR1_Amn	SINE/MIR	(81)	149	87	3383103
15	24.6	0.0	5.2	chr6	43770925	43770982	(127034997)	+	(AGCCG)n	Simple_repeat	1	58	(0)	3385989
23	22.1	1.7	0.0	chr6	43770967	43771024	(127034955)	+	GA-rich	Low_complexity	1	59	(0)	3385990
13	23.2	2.4	0.0	chr6	43771190	43771230	(127034749)	+	(AGCCGG)n	Simple_repeat	1	42	(0)	3385991
2805	19.1	4.8	0.0	chr6	44170209	44170748	(126635231)	C	MLT1F1	LTR/ERVL-MaLR	(2)	567	1	3386694
525	33.6	9.2	3.6	chr6	44356006	44356369	(126449610)	+	L2	LINE/L2	2339	2729	(690)	3387034
2606	20.1	4.5	6.3	chr6	44356370	44356937	(126449042)	C	MLT1F2	LTR/ERVL-MaLR	(3)	557	1	3387035
1522	26.4	6.7	5.0	chr6	45747819	45748333	(125057646)	C	MLT1F2	LTR/ERVL-MaLR	(4)	556	33	3389102
1720	24.9	4.7	11.2	chr6	46202701	46203301	(124602678)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3389825
346	34.7	12.5	6.0	chr6	47290816	47291563	(123514416)	C	L2b	LINE/L2	(4)	3371	2570	3391521
272	26.6	13.2	2.4	chr6	51980785	51980992	(118824987)	C	Helitron2Na_Mam	RC?/Helitron?	(4)	320	87	3397808
71	0.0	0.0	0.0	chr6	51981311	51981373	(118824606)	+	(CTCTCC)n	Simple_repeat	1	63	(0)	3397809
2717	18.4	5.8	1.7	chr6	52579192	52579722	(118226257)	+	MLT1F1	LTR/ERVL-MaLR	16	569	(0)	3398750
2224	22.5	4.3	6.0	chr6	53040158	53040720	(117765259)	+	MLT1F2	LTR/ERVL-MaLR	8	560	(0)	3399443
2124	23.5	4.7	2.9	chr6	53240518	53240827	(117565152)	C	MLT1F	LTR/ERVL-MaLR	(12)	536	231	3399863
2486	17.0	9.9	2.9	chr6	53240828	53241015	(117564964)	C	MER74A	LTR/ERVL	(3)	555	368	3399864
281	8.3	0.0	0.0	chr6	53668039	53668074	(117137905)	+	L2a	LINE/L2	3307	3342	(84)	3400532
1063	26.2	4.7	1.3	chr6	53668087	53668395	(117137584)	+	MLT1F2	LTR/ERVL-MaLR	202	521	(39)	3400533
472	33.3	10.3	0.0	chr6	53668438	53668602	(117137377)	C	MIR	SINE/MIR	(66)	196	13	3400534
1455	28.5	4.5	3.2	chr6	56020593	56021118	(114784861)	+	MLT1F2	LTR/ERVL-MaLR	26	558	(2)	3403644
307	37.6	2.0	1.3	chr6	56021154	56021304	(114784675)	+	MLT1O	LTR/ERVL-MaLR	38	189	(353)	3403645
1906	23.2	6.3	3.2	chr6	89456832	89457356	(81348623)	C	MLT1F	LTR/ERVL-MaLR	(6)	542	1	3444817
1718	22.3	6.1	6.2	chr6	89939044	89939501	(80866478)	+	MLT1F	LTR/ERVL-MaLR	60	570	(9)	3445689
911	29.6	9.5	11.2	chr6	91752569	91753068	(79052911)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	68	3448093
1177	25.1	2.6	3.2	chr6	100316320	100316628	(70489351)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	374	3458866
25	22.3	0.0	4.1	chr6	108260931	108261003	(62544976)	+	(GCC)n	Simple_repeat	1	73	(0)	3470262
1754	21.1	8.8	7.8	chr6	108804802	108805355	(62000624)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	3471180
1796	25.4	6.7	7.4	chr6	109075276	109075828	(61730151)	+	MLT1F2	LTR/ERVL-MaLR	12	560	(0)	3471608
2260	18.6	3.6	1.7	chr6	111938553	111939017	(58866962)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	96	3476397
949	25.1	12.8	5.6	chr6	113529291	113529737	(57276242)	+	MLT1F2	LTR/ERVL-MaLR	75	558	(2)	3478628
1839	19.6	7.1	9.2	chr6	117526780	117527352	(53278627)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	3484009
1538	20.7	1.5	3.6	chr6	118066349	118066684	(52739295)	+	MLT1E1A	LTR/ERVL-MaLR	352	680	(0)	3484674
676	6.2	0.0	0.0	chr6	118066738	118066818	(52739161)	C	AluSz6	SINE/Alu	(4)	308	228	3484675
305	27.8	12.9	8.8	chr6	118651557	118651749	(52154230)	C	L1M4b	LINE/L1	(6265)	602	401	3485446
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
372	37.4	3.9	0.5	chr6	122615285	122615480	(48190499)	C	L2	LINE/L2	(674)	2745	2543	3490628
1568	22.6	1.0	4.9	chr6	124685814	124686218	(46119761)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	292	3493300
2506	14.7	4.7	0.0	chr6	124686251	124686658	(46119321)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3493301
1290	22.2	4.5	6.2	chr6	126103378	126103762	(44702217)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	303	3495263
2280	21.9	1.8	6.4	chr6	126553366	126553940	(44252039)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	3495780
13	11.6	2.2	8.7	chr6	134174939	134174983	(36630996)	+	(GCCTC)n	Simple_repeat	1	46	(0)	3506324
2313	20.9	10.3	0.2	chr6	135689862	135690341	(35115638)	C	MLT1F1	LTR/ERVL-MaLR	(35)	534	1	3508799
1832	23.1	5.8	2.7	chr6	137019919	137020443	(33785536)	+	MLT1F1	LTR/ERVL-MaLR	19	569	(0)	3510855
12	15.6	3.5	0.0	chr6	137866823	137866851	(32939128)	+	(TTTC)n	Simple_repeat	1	30	(0)	3512114
13	22.8	5.9	0.0	chr6	138773803	138773853	(32032126)	+	(GGCTGT)n	Simple_repeat	1	54	(0)	3513523
1836	12.6	4.8	2.5	chr6	142300067	142300352	(28505627)	C	AluSz	SINE/Alu	(18)	294	2	3518333
406	21.7	12.3	3.4	chr6	142300418	142300565	(28505414)	+	MLT1F2	LTR/ERVL-MaLR	328	490	(70)	3518334
979	24.3	9.6	2.8	chr6	143573908	143574395	(27231584)	C	MLT1E2	LTR/ERVL-MaLR	(0)	680	53	3520107
18	18.9	4.2	0.0	chr6	145814784	145814831	(24991148)	+	(CCCGC)n	Simple_repeat	1	50	(0)	3523214
3787	15.0	3.4	3.4	chr6	147088414	147089139	(23716840)	+	LTR8A	LTR/ERV1	1	726	(1)	3524907
13	32.8	0.0	0.0	chr6	147203730	147203779	(23602200)	+	(GCC)n	Simple_repeat	1	50	(0)	3525091
367	17.9	1.5	0.0	chr6	147886709	147886775	(22919204)	+	U4	snRNA	1	68	(77)	3526043
1290	22.8	3.0	6.5	chr6	147886770	147887121	(22918858)	+	MLT1E1A	LTR/ERVL-MaLR	342	680	(0)	3526042
3224	21.1	6.9	3.3	chr6	147887185	147888248	(22917731)	C	L1ME1	LINE/L1	(29)	6323	5226	3526044
2334	21.6	8.8	3.1	chr6	148812382	148812896	(21993083)	C	MLT1F	LTR/ERVL-MaLR	(1)	547	1	3527486
743	25.5	7.7	7.4	chr6	148847112	148847408	(21958571)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	263	3527545
999	13.2	1.9	0.0	chr6	148847432	148847582	(21958397)	+	MER73	LTR/ERVL	1	154	(490)	3527546
306	20.0	0.0	1.6	chr6	148847580	148847640	(21958339)	C	MLT1F2	LTR/ERVL-MaLR	(493)	67	8	3527545
1280	21.5	11.5	1.9	chr6	149023243	149023555	(21782424)	+	MLT1F	LTR/ERVL-MaLR	151	497	(51)	3527809
17	31.7	2.0	4.0	chr6	149749714	149749812	(21056167)	+	(GCGGCG)n	Simple_repeat	1	101	(0)	3529085
500	26.9	8.8	7.9	chr6	150192605	150192875	(20613104)	C	MLT1H2	LTR/ERVL-MaLR	(5)	544	274	3529831
190	28.2	17.5	1.2	chr6	150193156	150193241	(20612738)	+	MER5B	DNA/hAT-Charlie	1	103	(75)	3529832
16	21.0	0.0	0.0	chr6	150193248	150193282	(20612697)	+	GA-rich	Low_complexity	1	35	(0)	3529833
2285	10.5	0.0	0.0	chr6	150317991	150318284	(20487695)	C	AluSc	SINE/Alu	(15)	294	1	3530026
2518	17.6	9.7	1.5	chr6	154521268	154521786	(16284193)	+	MLT1F1	LTR/ERVL-MaLR	1	566	(3)	3536535
201	32.9	3.9	1.4	chr6	156810630	156810703	(13995276)	C	L2b	LINE/L2	(209)	3166	3091	3540042
1579	21.0	19.9	2.6	chr6	156810851	156811388	(13994591)	C	MLT1E1	LTR/ERVL-MaLR	(0)	654	1	3540043
2256	20.7	11.0	1.5	chr6	157055619	157056232	(13749747)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	1	3540364
876	26.6	17.4	1.1	chr6	157105900	157106191	(13699788)	+	L1MC5a	LINE/L1	193	556	(2221)	3540426
763	23.7	7.3	3.8	chr6	157106245	157106533	(13699446)	C	MLT1E1	LTR/ERVL-MaLR	(33)	621	322	3540429
641	17.0	3.6	4.9	chr6	157106550	157106691	(13699288)	C	MLT1E1	LTR/ERVL-MaLR	(419)	234	95	3540429
1279	17.6	4.6	2.3	chr6	157833844	157834146	(12971833)	C	LTR45B	LTR/ERV1	(0)	783	182	3541553
880	18.8	0.7	1.9	chr6	157834151	157834339	(12971640)	C	AluJb	SINE/Alu	(0)	312	131	3541554
1774	16.1	0.4	3.1	chr6	157834347	157834632	(12971347)	C	AluJr	SINE/Alu	(12)	300	23	3541555
1004	17.1	1.6	10.9	chr6	157834646	157834855	(12971124)	C	LTR45B	LTR/ERV1	(297)	192	3	3541553
2190	19.1	8.5	7.2	chr6	158518785	158519437	(12286542)	C	MER63C	DNA/hAT-Blackjack	(1)	929	268	3542654
1963	21.4	7.9	1.4	chr6	159160717	159161200	(11644779)	+	MLT1F	LTR/ERVL-MaLR	1	518	(30)	3543737
2280	21.8	6.4	2.6	chr6	163633074	163633380	(7172599)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	228	3549718
2656	10.6	0.6	0.3	chr6	163633381	163633741	(7172238)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	3549719
530	25.0	11.1	5.0	chr6	166670285	166670503	(4135476)	+	MLT1F2	LTR/ERVL-MaLR	327	560	(0)	3553516
275	27.4	4.5	4.5	chr6	167120074	167120161	(3685818)	C	MLT1H2	LTR/ERVL-MaLR	(29)	460	373	3554052
812	30.2	9.9	2.7	chr6	168779584	168780106	(2025873)	+	MLT1F1	LTR/ERVL-MaLR	7	569	(0)	3555793
850	27.9	14.8	2.0	chr6	168794949	168795387	(2010592)	C	MLT1F	LTR/ERVL-MaLR	(33)	515	11	3555811
182	24.7	1.3	0.0	chr6	170452770	170453217	(352762)	+	(GT)n	Simple_repeat	1	454	(0)	3557445
188	19.2	15.1	1.4	chr7	317828	317901	(159028072)	C	MIRc	SINE/MIR	(116)	152	67	3558186
1155	23.7	13.6	2.1	chr7	717794	718215	(158627758)	+	MLT1F2	LTR/ERVL-MaLR	1	478	(82)	3558789
50	2.2	0.0	0.0	chr7	718256	718302	(158627671)	+	(AC)n	Simple_repeat	1	47	(0)	3558790
32	12.9	0.0	0.0	chr7	718303	718347	(158627626)	+	(TA)n	Simple_repeat	2	46	(0)	3558791
1361	25.5	7.0	0.6	chr7	1391601	1392066	(157953907)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	51	3559829
518	29.2	5.3	1.1	chr7	1394351	1394530	(157951443)	C	MLT1F2	LTR/ERVL-MaLR	(1)	653	466	3559833
707	28.2	6.1	7.3	chr7	1394572	1394969	(157951004)	C	MLT1F2	LTR/ERVL-MaLR	(167)	393	1	3559833
1999	21.4	6.7	2.9	chr7	1635394	1635913	(157710060)	C	MLT1F	LTR/ERVL-MaLR	(1)	547	7	3560219
2249	8.8	0.3	2.3	chr7	2395885	2396191	(156949782)	+	AluSx1	SINE/Alu	12	312	(0)	3561312
280	29.3	0.0	0.0	chr7	2396216	2396290	(156949683)	C	MLT1G3	LTR/ERVL-MaLR	(534)	76	2	3561301
188	20.5	0.0	0.0	chr7	2396293	2396331	(156949642)	C	MIR1_Amn	SINE/MIR	(78)	152	114	3561313
302	23.2	11.8	0.0	chr7	2396662	2396743	(156949230)	+	AluSx	SINE/Alu	101	193	(119)	3561314
381	27.6	4.5	5.2	chr7	2905882	2906015	(156439958)	C	MER94	DNA/hAT-Blackjack	(1)	133	1	3562262
1431	27.0	9.4	0.6	chr7	4200354	4200828	(155145145)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	40	3564394
679	23.9	2.4	0.0	chr7	4200829	4200991	(155144982)	+	MER58A	DNA/hAT-Charlie	4	170	(54)	3564395
1727	25.6	13.0	3.8	chr7	4244560	4245171	(155100802)	C	MLT1E1A	LTR/ERVL-MaLR	(1)	679	3	3564460
256	20.2	4.1	7.8	chr7	4519819	4519920	(154826053)	C	Charlie22a	DNA/hAT-Charlie	(65)	426	329	3565003
1530	23.6	1.0	2.5	chr7	4646551	4646950	(154699023)	+	MLT1E1A	LTR/ERVL-MaLR	287	680	(0)	3565283
1275	26.1	14.3	0.0	chr7	4917807	4918274	(154427699)	+	MLT1F	LTR/ERVL-MaLR	3	548	(0)	3565785
2060	13.0	0.0	1.3	chr7	4918456	4918787	(154427186)	C	AluSz	SINE/Alu	(0)	312	1	3565786
1771	19.7	0.0	1.9	chr7	5411903	5412211	(153933762)	+	AluJr	SINE/Alu	1	303	(9)	3566971
20	0.0	0.0	0.0	chr7	5412245	5412266	(153933707)	+	(A)n	Simple_repeat	1	22	(0)	3566972
2235	9.5	0.0	0.0	chr7	5412294	5412578	(153933395)	+	AluSx1	SINE/Alu	1	285	(27)	3566973
46	0.0	0.0	0.0	chr7	5554790	5554828	(153791145)	+	(TG)n	Simple_repeat	1	39	(0)	3567324
15	23.5	0.0	6.5	chr7	5555179	5555240	(153790733)	+	(CCCGC)n	Simple_repeat	1	62	(0)	3567325
2307	6.3	1.7	0.3	chr7	5563836	5564122	(153781851)	C	AluSp	SINE/Alu	(21)	292	2	3567346
13	9.4	8.3	2.6	chr7	6059100	6059135	(153286838)	+	(GCCCA)n	Simple_repeat	1	39	(0)	3568487
625	17.6	0.8	7.1	chr7	6437201	6437262	(152908711)	C	MER94	DNA/hAT-Blackjack	(78)	56	4	3569360
317	26.8	8.0	3.8	chr7	6437300	6437431	(152908542)	C	MIRb	SINE/MIR	(20)	248	111	3569363
939	17.3	0.0	0.0	chr7	6437441	6437590	(152908383)	C	AluJb	SINE/Alu	(21)	291	142	3569364
2060	11.3	2.3	0.0	chr7	6437637	6437937	(152908036)	C	AluSx1	SINE/Alu	(0)	312	5	3569365
1346	22.9	4.6	0.3	chr7	6489615	6489925	(152856048)	+	MLT1F1	LTR/ERVL-MaLR	98	422	(147)	3569493
802	16.4	2.9	6.1	chr7	6489926	6490090	(152855883)	C	MER67C	LTR/ERV1	(0)	711	554	3569497
2293	10.9	0.7	0.0	chr7	6490091	6490383	(152855590)	+	AluSx	SINE/Alu	1	295	(17)	3569498
17	13.3	7.1	0.0	chr7	6590130	6590171	(152755802)	+	(GCAG)n	Simple_repeat	1	45	(0)	3569752
1519	7.5	4.2	0.8	chr7	6590230	6590483	(152755490)	+	Charlie17b	DNA/hAT-Charlie	158	420	(784)	3569753
12	16.0	0.0	3.3	chr7	8262052	8262081	(151083892)	+	(CCCGC)n	Simple_repeat	1	30	(0)	3572279
1849	24.2	6.8	5.0	chr7	18217788	18218161	(141127812)	C	MLT1F	LTR/ERVL-MaLR	(17)	531	127	3585005
2138	15.4	0.0	0.0	chr7	18218162	18218467	(141127506)	+	AluSz6	SINE/Alu	1	306	(6)	3585006
1113	25.3	4.2	9.8	chr7	20806244	20806820	(138539153)	C	MLT1E2	LTR/ERVL-MaLR	(2)	625	10	3588291
298	27.5	3.2	0.0	chr7	23299006	23299096	(136046877)	C	L2a	LINE/L2	(39)	3387	3294	3592090
282	24.1	10.4	5.1	chr7	23598095	23598212	(135747761)	+	MIRb	SINE/MIR	16	147	(121)	3592698
2043	13.0	4.2	0.0	chr7	26008077	26008369	(133337604)	+	AluSz6	SINE/Alu	2	307	(5)	3596264
12	13.2	5.7	2.7	chr7	26008403	26008437	(133337536)	+	G-rich	Low_complexity	1	37	(0)	3596265
299	23.6	10.7	4.7	chr7	26008499	26008728	(133337245)	C	MIR	SINE/MIR	(0)	268	18	3596266
15	21.2	0.0	0.0	chr7	27113640	27113677	(132232296)	+	(GCTCAG)n	Simple_repeat	1	38	(0)	3598031
25	22.3	0.0	0.0	chr7	27113856	27113907	(132232066)	+	(C)n	Simple_repeat	1	52	(0)	3598032
16	9.3	0.0	7.5	chr7	27242414	27242453	(132103520)	+	A-rich	Low_complexity	1	40	(0)	3598161
13	24.6	0.0	4.3	chr7	27242546	27242592	(132103381)	+	(TCTG)n	Simple_repeat	1	47	(0)	3598162
378	23.4	18.2	3.0	chr7	27834703	27834869	(131511104)	+	MLT1F1	LTR/ERVL-MaLR	305	522	(47)	3599118
2512	7.8	0.7	0.0	chr7	28531750	28532043	(130813930)	+	AluSc8	SINE/Alu	2	297	(14)	3600195
1855	13.5	8.5	1.0	chr7	28532126	28532438	(130813535)	+	MLT1F	LTR/ERVL-MaLR	203	532	(16)	3600196
1524	25.5	6.8	3.4	chr7	28911125	28911659	(130434314)	+	MLT1F2	LTR/ERVL-MaLR	1	555	(5)	3600754
254	29.8	3.1	8.0	chr7	28911672	28911853	(130434120)	+	MIR3	SINE/MIR	93	262	(6)	3600755
1671	20.8	3.9	24.3	chr7	29510138	29510848	(129835125)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	3601736
2598	18.4	5.8	0.6	chr7	30237830	30238348	(129107625)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	3602834
240	23.2	8.5	4.4	chr7	30238349	30238427	(129107546)	C	MIRb	SINE/MIR	(56)	212	127	3602833
1497	20.4	1.1	0.7	chr7	30588151	30588426	(128757547)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	293	3603350
1037	26.3	2.8	0.0	chr7	30588427	30588707	(128757266)	+	L1ME2	LINE/L1	2309	2597	(3549)	3603351
2577	21.8	1.1	3.5	chr7	32227615	32228164	(127117809)	+	MLT1F	LTR/ERVL-MaLR	12	548	(0)	3605849
1672	23.1	5.2	10.2	chr7	33840992	33841521	(125504452)	+	MLT1F2	LTR/ERVL-MaLR	59	560	(0)	3608473
2185	23.1	3.2	8.6	chr7	35580577	35581179	(123764794)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	3610893
1095	21.3	10.1	4.6	chr7	36513466	36513950	(122832023)	+	MLT1E1A	LTR/ERVL-MaLR	7	669	(11)	3612424
301	27.5	9.9	5.8	chr7	36514054	36514392	(122831581)	C	L2b	LINE/L2	(97)	3278	2932	3612421
2109	25.1	2.5	0.0	chr7	36832166	36832682	(122513291)	+	MLT1F	LTR/ERVL-MaLR	16	545	(3)	3612899
1702	24.3	11.3	1.0	chr7	37412601	37413108	(121932865)	+	MLT1F1	LTR/ERVL-MaLR	1	567	(2)	3613702
16	13.2	0.0	0.0	chr7	37413129	37413153	(121932820)	+	(T)n	Simple_repeat	1	25	(0)	3613703
2438	20.2	4.8	8.0	chr7	37521626	37521924	(121824049)	C	MLT1F1	LTR/ERVL-MaLR	(3)	566	292	3613886
2217	11.1	0.3	1.9	chr7	37521925	37522239	(121823734)	C	AluSg	SINE/Alu	(0)	310	1	3613887
1400	24.8	6.0	9.8	chr7	42758759	42759208	(116586765)	C	MLT1F2	LTR/ERVL-MaLR	(7)	553	136	3621663
2265	22.5	4.2	3.9	chr7	43088217	43088715	(116257258)	+	MLT1F1	LTR/ERVL-MaLR	60	567	(2)	3622081
1958	25.0	5.1	0.8	chr7	45867982	45868505	(113477468)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	1	3626544
2047	8.8	1.4	0.4	chr7	48088061	48088332	(111257641)	C	AluSq2	SINE/Alu	(38)	275	1	3629473
1336	23.5	11.8	7.3	chr7	50438009	50438541	(108907432)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3632370
2493	20.8	2.4	7.6	chr7	51078562	51079139	(108266834)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	14	3633173
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
5165	6.4	0.6	1.8	chr7	66237844	66238511	(93107462)	C	PABL_A	LTR/ERV1	(0)	660	1	3649592
1836	16.4	9.1	1.3	chr7	66238512	66238792	(93107181)	C	MLT2C2	LTR/ERVL	(159)	305	1	3649591
1279	16.7	7.3	0.4	chr7	69196803	69197043	(90148930)	C	MLT1F1	LTR/ERVL-MaLR	(1)	568	310	3656112
840	20.4	8.8	1.7	chr7	69197038	69197216	(90148757)	C	MLT1F1	LTR/ERVL-MaLR	(355)	193	1	3656112
297	27.6	7.0	3.3	chr7	69411624	69411773	(89934200)	C	UCON5	Unknown	(53)	383	228	3656613
633	20.4	4.5	0.0	chr7	69807323	69807469	(89538504)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	416	3657412
1062	18.9	19.0	3.2	chr7	69807654	69807940	(89538033)	C	MLT1F1	LTR/ERVL-MaLR	(152)	396	59	3657412
1913	10.5	7.9	2.5	chr7	69807941	69808226	(89537747)	C	AluSx	SINE/Alu	(9)	303	1	3657413
252	22.4	4.9	0.0	chr7	73667437	73667494	(85678479)	C	MIR3	SINE/MIR	(39)	169	109	3665207
2080	16.1	0.0	0.0	chr7	74355328	74355625	(84990348)	+	AluJr	SINE/Alu	1	298	(14)	3666868
1993	14.2	1.0	1.9	chr7	74521485	74521793	(84824180)	+	AluJr	SINE/Alu	6	311	(1)	3667296
2219	22.4	9.7	3.8	chr7	74521794	74522283	(84823690)	C	MLT1F1	LTR/ERVL-MaLR	(45)	524	1	3667295
1511	23.6	12.5	2.1	chr7	74975727	74976159	(84369814)	+	MLT1F	LTR/ERVL-MaLR	69	540	(8)	3668499
23	14.7	5.3	5.1	chr7	75073665	75073739	(84272234)	+	(GCCCCA)n	Simple_repeat	1	79	(0)	3668725
21	9.5	0.0	0.0	chr7	78020089	78020122	(81325851)	+	(CCACCC)n	Simple_repeat	1	34	(0)	3674884
2171	12.8	1.7	0.0	chr7	80060985	80061280	(79284693)	C	AluSz	SINE/Alu	(11)	301	1	3677603
1303	28.1	6.7	3.6	chr7	80061392	80061896	(79284077)	C	MLT1F2	LTR/ERVL-MaLR	(38)	522	1	3677604
13	21.3	0.0	0.0	chr7	85074946	85074978	(74270995)	+	(TAAGA)n	Simple_repeat	1	33	(0)	3684328
1669	23.7	1.4	17.5	chr7	88535443	88536111	(70809862)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3688693
2139	23.7	4.3	3.1	chr7	91612429	91612981	(67732992)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3692663
251	25.0	1.5	1.5	chr7	91883523	91883587	(67462386)	C	LTR88c	LTR/Gypsy?	(592)	270	206	3693013
904	25.0	10.0	1.9	chr7	92672916	92673292	(66672681)	+	MLT1G3	LTR/ERVL-MaLR	84	519	(60)	3694269
4305	23.2	5.5	4.9	chr7	96536130	96538984	(62806989)	C	L1MCa	LINE/L1	(3203)	3361	317	3699526
1303	27.7	6.6	1.1	chr7	96539005	96539376	(62806597)	+	MLT1F2	LTR/ERVL-MaLR	167	560	(0)	3699528
969	15.5	4.5	0.0	chr7	97499031	97499198	(61846775)	C	MER5A	DNA/hAT-Charlie	(10)	179	4	3700909
878	24.4	2.2	0.0	chr7	98266985	98267201	(61078772)	+	MLT1A0	LTR/ERVL-MaLR	144	365	(0)	3702211
1571	25.9	4.4	3.3	chr7	98267202	98267721	(61078252)	C	MLT1E1A	LTR/ERVL-MaLR	(18)	662	137	3702212
2006	24.0	3.3	1.9	chr7	98732943	98733482	(60612491)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	3703268
1512	23.3	12.0	2.3	chr7	100264829	100265261	(59080712)	C	MLT1F	LTR/ERVL-MaLR	(8)	540	68	3706189
13	24.6	5.1	1.6	chr7	100827218	100827276	(58518697)	+	G-rich	Low_complexity	1	62	(0)	3707461
34	30.9	0.0	4.5	chr7	100827418	100827572	(58518401)	+	G-rich	Low_complexity	1	155	(0)	3707462
1960	12.8	0.0	3.5	chr7	101792733	101793045	(57552928)	C	AluJo	SINE/Alu	(1)	311	10	3709690
1357	18.4	4.2	0.1	chr7	102881588	102881870	(56464103)	C	MLT1F1	LTR/ERVL-MaLR	(7)	562	277	3711882
1835	16.3	2.9	0.3	chr7	102881980	102882279	(56463694)	+	AluJr4	SINE/Alu	1	308	(4)	3711883
248	26.6	11.2	1.2	chr7	105398976	105399055	(53946918)	+	MIR	SINE/MIR	173	261	(1)	3715728
2142	19.0	16.7	0.0	chr7	105399078	105399551	(53946422)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	3715729
2172	22.1	8.7	5.2	chr7	107023413	107023901	(52322072)	+	MLT1F1	LTR/ERVL-MaLR	46	565	(4)	3718473
1458	25.7	8.2	7.5	chr7	107305463	107306018	(52039955)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	3718895
13	16.2	0.0	0.0	chr7	108526157	108526184	(50819789)	+	(CCCGC)n	Simple_repeat	1	28	(0)	3720663
388	25.2	7.7	5.3	chr7	112639266	112639416	(46706557)	+	MLT1F2	LTR/ERVL-MaLR	57	211	(349)	3726125
303	23.1	2.5	4.9	chr7	112639472	112639553	(46706420)	+	MLT1F2	LTR/ERVL-MaLR	390	469	(158)	3726125
246	10.5	0.0	0.0	chr7	112639570	112639607	(46706366)	+	MLT1F2	LTR/ERVL-MaLR	523	560	(0)	3726125
1599	26.6	9.7	4.2	chr7	114908199	114908724	(44437249)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	3	3729008
1378	24.1	3.6	6.2	chr7	116331949	116332351	(43013622)	C	MLT1E1A	LTR/ERVL-MaLR	(2)	678	287	3730904
1256	19.1	7.8	10.4	chr7	127649977	127650361	(31695612)	+	MLT1F2	LTR/ERVL-MaLR	187	560	(0)	3746058
375	11.6	0.2	3.4	chr7	128873128	128873208	(30472765)	+	MLT1F	LTR/ERVL-MaLR	1	78	(482)	3748078
412	29.6	3.6	0.7	chr7	128873320	128873455	(30472518)	C	MIR3	SINE/MIR	(60)	148	9	3748079
933	13.8	0.7	2.2	chr7	130388619	130388756	(28957217)	C	AluJo	SINE/Alu	(176)	136	1	3751085
2195	12.0	0.0	0.3	chr7	130389052	130389342	(28956631)	+	AluSx3	SINE/Alu	1	290	(21)	3751086
38	5.9	0.0	3.5	chr7	130734150	130734206	(28611767)	+	(CGC)n	Simple_repeat	1	57	(0)	3751558
13	16.0	2.7	2.6	chr7	130734430	130734466	(28611507)	+	(GCAGCCC)n	Simple_repeat	1	38	(0)	3751559
1826	23.1	10.2	3.9	chr7	134200738	134201373	(25144600)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	1	3757116
1405	21.2	20.9	0.0	chr7	134438674	134439049	(24906924)	+	MLT1F	LTR/ERVL-MaLR	43	511	(58)	3757490
468	24.2	3.9	8.0	chr7	134439118	134439279	(24906694)	+	Charlie15a	DNA/hAT-Charlie	65	219	(5)	3757491
1823	22.2	4.8	7.4	chr7	136000456	136000995	(23344978)	+	MLT1F2	LTR/ERVL-MaLR	28	552	(8)	3759955
1223	23.9	6.6	7.1	chr7	136465261	136465656	(22880317)	+	MLT1E1A	LTR/ERVL-MaLR	287	680	(0)	3760658
1795	21.6	1.4	1.9	chr7	138261471	138261843	(21084130)	+	MLT1F	LTR/ERVL-MaLR	122	492	(56)	3763238
400	36.9	3.2	8.5	chr7	138261993	138262054	(21083919)	C	LTR78B	LTR/ERV1	(485)	811	763	3763239
978	15.0	3.2	14.6	chr7	139945661	139945941	(19400032)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	313	3766453
1894	16.8	0.0	2.3	chr7	139946051	139946353	(19399620)	+	AluJo	SINE/Alu	1	296	(16)	3766454
1706	23.0	11.4	7.3	chr7	141672230	141672763	(17673210)	+	MLT1F2	LTR/ERVL-MaLR	2	560	(0)	3769652
396	29.1	6.3	7.4	chr7	141672764	141672921	(17673052)	+	LTR50	LTR/ERVL	606	682	(113)	3769651
1358	17.6	0.9	0.0	chr7	148671715	148671936	(10674037)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	346	3779205
2314	11.7	3.5	0.6	chr7	148671943	148672277	(10673696)	C	MER61C	LTR/ERV1	(0)	428	84	3779206
1843	23.7	7.3	6.8	chr7	149048725	149049272	(10296701)	+	MLT1F2	LTR/ERVL-MaLR	2	552	(8)	3779903
296	30.9	8.3	0.0	chr7	149203774	149203883	(10142090)	+	MIRc	SINE/MIR	114	233	(35)	3780281
1309	18.1	1.6	1.6	chr7	149203884	149204135	(10141838)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	318	3780282
214	31.3	16.2	0.7	chr7	149204254	149204523	(10141450)	C	L2	LINE/L2	(1368)	2051	1732	3780283
234	26.9	0.0	0.0	chr7	149395881	149395932	(9950041)	+	tRNA-Cys-TGY	tRNA	7	58	(17)	3780622
1789	23.9	3.0	1.7	chr7	149395952	149396372	(9949601)	+	MLT1F	LTR/ERVL-MaLR	118	544	(4)	3780623
241	32.9	9.1	4.1	chr7	149396377	149396780	(9949193)	C	L2b	LINE/L2	(292)	3095	2670	3780624
658	1.4	0.0	0.0	chr7	149635687	149635758	(9710215)	+	tRNA-Cys-TGY	tRNA	1	72	(3)	3780964
379	17.2	1.5	0.0	chr7	149635993	149636056	(9709917)	C	tRNA-Cys-TGY	tRNA	(3)	72	8	3780965
1620	25.7	4.8	6.4	chr7	150223735	150224266	(9121707)	C	MLT1F2	LTR/ERVL-MaLR	(37)	523	1	3781722
1653	23.5	6.9	2.8	chr7	151473027	151473526	(7872447)	+	MLT1F2	LTR/ERVL-MaLR	1	522	(38)	3783500
19	14.8	5.4	3.4	chr7	151519191	151519246	(7826727)	+	(CCCG)n	Simple_repeat	1	59	(0)	3783576
309	30.6	1.8	0.0	chr7	151550671	151550781	(7795192)	+	MIRb	SINE/MIR	150	262	(6)	3783648
388	26.1	2.6	0.0	chr7	151550842	151550952	(7795021)	C	L2a	LINE/L2	(262)	3164	3051	3783649
236	27.7	7.0	1.6	chr7	151550997	151551117	(7794856)	+	L2a	LINE/L2	3273	3400	(26)	3783650
2034	21.4	8.5	4.2	chr7	151645044	151645570	(7700403)	+	MLT1F2	LTR/ERVL-MaLR	1	552	(8)	3783822
3933	23.8	4.8	1.8	chr7	151645590	151646618	(7699355)	C	L1ME1	LINE/L1	(875)	5271	4210	3783821
1767	14.0	12.1	2.8	chr7	151666167	151666519	(7679454)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	3783866
1304	20.3	3.4	3.4	chr7	151666520	151666742	(7679231)	C	MLT1F	LTR/ERVL-MaLR	(73)	475	252	3783865
957	24.3	14.4	15.8	chr7	152521550	152521680	(6824293)	+	MER67A	LTR/ERV1	409	543	(0)	3785349
2153	19.2	7.8	1.0	chr7	152521681	152522129	(6823844)	C	MLT1F	LTR/ERVL-MaLR	(59)	489	5	3785348
1599	26.7	2.7	4.0	chr7	153745003	153745532	(5600441)	+	MLT1F2	LTR/ERVL-MaLR	1	523	(37)	3787369
2276	22.9	4.1	1.5	chr7	156224746	156225290	(3120683)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3790650
1106	15.9	6.2	0.4	chr7	156659677	156659903	(2686070)	C	LTR31	LTR/ERV1	(374)	245	5	3791191
14	18.2	8.6	1.6	chr7	157138291	157138348	(2207625)	+	(GTATAT)n	Simple_repeat	1	63	(0)	3791936
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
1634	24.3	9.7	7.2	chr8	9206561	9207102	(135931534)	+	MLT1F2	LTR/ERVL-MaLR	1	557	(3)	3806097
993	24.2	19.6	7.8	chr8	9461716	9462203	(135676433)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3806544
1099	28.0	5.8	2.6	chr8	9462204	9462364	(135676272)	C	MLT1J	LTR/ERVL-MaLR	(348)	164	5	3806543
1572	21.6	9.3	10.0	chr8	10182308	10182551	(134956085)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	324	3807687
552	10.3	6.5	0.0	chr8	10182552	10182671	(134955965)	C	L1MA2	LINE/L1	(0)	6304	6201	3807688
1572	21.6	9.3	10.0	chr8	10182672	10182893	(134955743)	C	MLT1F2	LTR/ERVL-MaLR	(237)	323	98	3807687
1144	20.8	17.5	5.3	chr8	10321516	10321967	(134816669)	+	MLT1F	LTR/ERVL-MaLR	3	521	(27)	3807878
1438	21.2	10.7	13.2	chr8	11212756	11213330	(133925306)	+	MLT1F2	LTR/ERVL-MaLR	1	559	(1)	3809269
2387	21.1	6.6	1.4	chr8	11236627	11237139	(133901497)	+	MLT1F	LTR/ERVL-MaLR	5	546	(2)	3809315
258	31.0	7.5	8.4	chr8	11237207	11237396	(133901240)	+	L2c	LINE/L2	3198	3385	(2)	3809316
1063	28.5	7.6	2.6	chr8	11288331	11288890	(133849746)	C	L2a	LINE/L2	(131)	3295	2696	3809401
2137	13.3	0.3	0.3	chr8	11288891	11289199	(133849437)	+	AluSx	SINE/Alu	1	309	(3)	3809402
1982	15.3	1.3	3.5	chr8	13037301	13037613	(132101023)	C	AluJb	SINE/Alu	(6)	306	1	3812028
745	26.0	0.9	13.0	chr8	13037614	13037696	(132100940)	C	MLT1F-int	LTR/ERVL-MaLR	(174)	1235	1181	3812027
1948	23.0	9.2	1.6	chr8	13037703	13038206	(132100430)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	1	3812027
2205	10.3	2.4	0.3	chr8	24708037	24708328	(120430308)	+	AluSq2	SINE/Alu	1	298	(15)	3829855
1894	20.4	8.3	6.4	chr8	27299860	27300579	(117838057)	+	MLT1F2	LTR/ERVL-MaLR	4	619	(5)	3834139
217	30.6	5.2	8.7	chr8	28384434	28384594	(116754042)	+	L2c	LINE/L2	3182	3336	(51)	3836022
1510	22.8	9.5	6.8	chr8	28690390	28690483	(116448153)	C	MLT1F	LTR/ERVL-MaLR	(61)	487	391	3836695
645	3.3	8.0	0.0	chr8	28690484	28690575	(116448061)	C	L1PA13	LINE/L1	(2)	6161	6062	3836698
1510	22.8	9.5	6.8	chr8	28690576	28690951	(116447685)	C	MLT1F	LTR/ERVL-MaLR	(158)	390	3	3836695
2281	20.9	4.8	8.8	chr8	29677166	29677746	(115460890)	C	MLT1F2	LTR/ERVL-MaLR	(3)	557	1	3838331
1621	19.7	6.6	3.7	chr8	37476898	37477250	(107661386)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	1	3850370
19	13.6	6.7	3.1	chr8	37477289	37477348	(107661288)	+	(TTCCTGC)n	Simple_repeat	1	64	(0)	3850371
37	14.9	0.0	0.0	chr8	37665380	37665440	(107473196)	+	(AG)n	Simple_repeat	1	61	(0)	3850741
1400	23.6	2.6	4.8	chr8	37665442	37665792	(107472844)	+	MLT1F	LTR/ERVL-MaLR	204	546	(2)	3850742
1809	24.4	5.6	6.5	chr8	38659402	38659909	(106478727)	+	MLT1F	LTR/ERVL-MaLR	3	505	(43)	3852716
464	30.9	2.8	1.7	chr8	38681053	38681230	(106457406)	+	MIRc	SINE/MIR	15	194	(74)	3852751
983	5.4	7.2	0.0	chr8	40552918	40553046	(104585590)	+	MER85	DNA/PiggyBac	1	139	(0)	3855559
786	20.5	18.7	1.3	chr8	40553047	40553385	(104585251)	+	MLT1F1	LTR/ERVL-MaLR	127	591	(0)	3855558
1576	24.4	7.2	3.5	chr8	41149153	41149690	(103988946)	C	MLT1E1A	LTR/ERVL-MaLR	(5)	675	5	3856514
1522	25.6	8.0	4.9	chr8	41803449	41803977	(103334659)	C	L1ME3E	LINE/L1	(1892)	4254	3706	3857610
1998	20.6	12.4	0.0	chr8	41803978	41804472	(103334164)	C	MLT1F1	LTR/ERVL-MaLR	(4)	565	1	3857618
4245	6.1	1.8	3.4	chr8	42267298	42267409	(102871227)	+	MER41A	LTR/ERV1	442	553	(1)	3858477
19	0.0	0.0	0.0	chr8	43141289	43141312	(101997324)	+	(GCC)n	Simple_repeat	1	24	(0)	3860180
696	28.6	3.4	5.0	chr8	48497656	48497894	(96640742)	C	MLT1F2	LTR/ERVL-MaLR	(18)	542	308	3863384
883	20.8	1.2	0.0	chr8	48497909	48498067	(96640569)	+	MER44D	DNA/TcMar-Tigger	12	172	(533)	3863385
350	22.6	2.3	1.2	chr8	48498048	48498132	(96640504)	+	Tigger7	DNA/TcMar-Tigger	182	267	(2224)	3863386
334	23.8	2.3	0.0	chr8	48498136	48498219	(96640417)	+	Tigger7	DNA/TcMar-Tigger	2398	2483	(8)	3863387
17	10.1	3.1	0.0	chr8	48498249	48498284	(96640352)	+	(TTTTC)n	Simple_repeat	1	37	(0)	3863388
1769	18.8	8.9	2.1	chr8	51873537	51873893	(93264743)	+	MSTA	LTR/ERVL-MaLR	1	394	(34)	3867358
2035	19.4	9.8	3.1	chr8	52830558	52831078	(92307558)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3868755
1792	25.8	13.8	2.7	chr8	52831079	52832708	(92305928)	C	L1ME3B	LINE/L1	(211)	6031	4186	3868754
4074	16.4	3.7	4.5	chr8	56254151	56255705	(88882931)	+	L1MB8	LINE/L1	5488	7033	(5)	3873734
300	21.5	19.5	7.2	chr8	56255719	56255916	(88882720)	+	MLT1F2	LTR/ERVL-MaLR	164	367	(181)	3873733
636	21.4	0.2	1.6	chr8	56255884	56256040	(88882596)	+	MLT1F2	LTR/ERVL-MaLR	312	557	(3)	3873733
358	30.2	5.1	1.0	chr8	56256045	56256251	(88882385)	C	L1MEd	LINE/L1	(3472)	2674	2459	3873732
2062	26.4	2.6	1.2	chr8	56731439	56731999	(88406637)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	3874352
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
1485	28.3	1.5	2.6	chr8	57214477	57215085	(87923551)	C	MER50	LTR/ERV1	(123)	611	10	3874995
2148	25.6	1.9	0.9	chr8	57885867	57886425	(87252211)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	5	3875873
2420	21.0	5.6	0.4	chr8	60508409	60508881	(84629755)	+	MLT1F	LTR/ERVL-MaLR	1	499	(49)	3879272
707	24.5	10.4	6.7	chr8	69339005	69339447	(75799189)	+	MER67D	LTR/ERV1	2	485	(29)	3891868
38	0.0	0.0	0.0	chr8	70669607	70669639	(74468997)	+	(TG)n	Simple_repeat	1	33	(0)	3894218
13	0.0	0.0	0.0	chr8	70669640	70669656	(74468980)	+	(AGT)n	Simple_repeat	1	17	(0)	3894219
2665	5.0	0.0	0.0	chr8	70669665	70669965	(74468671)	C	AluY	SINE/Alu	(10)	301	1	3894220
2298	18.2	7.3	4.5	chr8	71526429	71526918	(73611718)	C	MLT1F1	LTR/ERVL-MaLR	(64)	505	1	3895334
1043	32.4	4.5	1.2	chr8	72177965	72178395	(72960241)	+	HERVL-int	LTR/ERVL	4882	5327	(387)	3896137
266	25.0	1.8	0.0	chr8	72178433	72178488	(72960148)	+	MLT1F1	LTR/ERVL-MaLR	3	59	(489)	3896138
810	26.3	11.3	8.9	chr8	72178494	72178644	(72959992)	+	MLT1F1	LTR/ERVL-MaLR	175	390	(179)	3896138
1926	15.0	13.4	1.1	chr8	72178645	72179015	(72959621)	C	MSTA	LTR/ERVL-MaLR	(0)	428	5	3896139
2213	21.8	3.0	7.3	chr8	73986212	73986438	(71152198)	C	L1MC5	LINE/L1	(446)	8858	8638	3898936
1984	22.1	9.9	1.0	chr8	73986439	73986935	(71151701)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	1	3898938
2213	21.7	2.9	7.2	chr8	73986936	73987280	(71151356)	C	L1MC5	LINE/L1	(667)	8637	8318	3898936
2214	21.8	10.4	1.6	chr8	74062907	74063423	(71075213)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	2	3899106
182	35.6	9.9	2.7	chr8	74574167	74574316	(70564320)	+	MamRTE1	LINE/RTE-BovB	151	312	(3500)	3899838
1770	21.4	9.3	9.7	chr8	79911027	79911585	(65227051)	+	MLT1F2	LTR/ERVL-MaLR	1	557	(3)	3906713
936	25.5	10.3	14.1	chr8	79911586	79911684	(65226952)	C	MLT1H2-int	LTR/ERVL-MaLR	(236)	1173	1100	3906712
2693	18.1	7.6	1.6	chr8	79991741	79991909	(65146727)	+	MLT1F1	LTR/ERVL-MaLR	12	187	(382)	3906839
60	0.0	0.0	0.0	chr8	79991910	79991960	(65146676)	+	(CT)n	Simple_repeat	1	51	(0)	3906840
2693	18.1	7.6	1.6	chr8	79991961	79992307	(65146329)	+	MLT1F1	LTR/ERVL-MaLR	188	561	(8)	3906839
1374	24.9	5.6	6.3	chr8	80759371	80759763	(64378873)	+	MLT1F2	LTR/ERVL-MaLR	1	404	(156)	3908346
1610	20.5	1.0	1.4	chr8	80759764	80760056	(64378580)	C	AluJr	SINE/Alu	(20)	292	1	3908347
834	32.2	13.4	0.5	chr8	80869214	80869628	(64269008)	+	L2a	LINE/L2	1249	1725	(1694)	3908485
485	21.7	1.7	1.7	chr8	80869644	80869760	(64268876)	+	MLT1E1A	LTR/ERVL-MaLR	14	130	(430)	3908486
1066	23.1	5.7	8.9	chr8	80869830	80870233	(64268403)	+	MLT1E1A	LTR/ERVL-MaLR	289	678	(2)	3908486
9953	10.6	0.1	0.7	chr8	85742400	85743923	(59394713)	C	L1P1	LINE/L1	(2125)	4021	2507	3914963
1913	24.8	3.8	10.1	chr8	91545071	91545666	(53592970)	+	MLT1F2	LTR/ERVL-MaLR	4	560	(0)	3922660
1490	9.3	0.0	0.0	chr8	94702601	94702782	(50435854)	C	AluY	SINE/Alu	(129)	182	1	3927385
406	24.6	0.0	0.0	chr8	94702783	94702851	(50435785)	C	AluSx1	SINE/Alu	(108)	204	136	3927386
1816	16.2	10.1	0.6	chr8	97305671	97306000	(47832636)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3931533
2305	20.2	16.5	0.4	chr8	97306096	97306642	(47831994)	C	MLT1E1	LTR/ERVL-MaLR	(1)	653	1	3931534
2818	21.4	1.5	0.4	chr8	97547839	97548372	(47590264)	C	MLT1F	LTR/ERVL-MaLR	(8)	540	1	3931876
1434	16.2	1.9	7.6	chr8	98052821	98053148	(47085488)	C	AluJb	SINE/Alu	(0)	312	22	3933001
1584	21.2	3.0	0.0	chr8	98053165	98053451	(47085185)	C	AluJr4	SINE/Alu	(11)	301	6	3933002
13	10.1	5.9	2.8	chr8	98053473	98053506	(47085130)	+	GA-rich	Low_complexity	1	36	(0)	3933003
1950	14.1	0.0	0.7	chr8	98053515	98053830	(47084806)	C	AluSz	SINE/Alu	(0)	312	1	3933004
2170	24.1	3.9	0.9	chr8	98176431	98176954	(46961682)	+	MLT1F	LTR/ERVL-MaLR	1	540	(8)	3933285
1072	25.5	10.0	14.2	chr8	100028797	100029362	(45109274)	+	MLT1F2	LTR/ERVL-MaLR	23	560	(0)	3936067
250	25.4	7.4	12.5	chr8	100029365	100029419	(45109217)	+	L1MEd	LINE/L1	806	858	(6228)	3936066
2392	10.6	0.3	0.3	chr8	100029420	100029731	(45108905)	+	AluSq2	SINE/Alu	1	312	(1)	3936068
184	20.5	0.0	0.0	chr8	100981815	100981853	(44156783)	C	L2a	LINE/L2	(0)	3426	3388	3937907
2369	22.5	4.5	0.8	chr8	100981862	100982376	(44156260)	C	MLT1F	LTR/ERVL-MaLR	(13)	535	1	3937908
1828	20.4	21.1	1.0	chr8	101053513	101053840	(44084796)	+	MLT1F1	LTR/ERVL-MaLR	3	400	(169)	3938058
1860	10.4	0.0	15.2	chr8	101053841	101054194	(44084442)	C	AluSz	SINE/Alu	(12)	300	1	3938059
2617	22.2	1.5	1.5	chr8	102641428	102641962	(42496674)	C	MLT1F	LTR/ERVL-MaLR	(9)	539	5	3940803
19	14.7	0.0	6.4	chr8	104588904	104588957	(40549679)	+	GA-rich	Low_complexity	1	50	(0)	3943935
33	2.9	0.0	0.0	chr8	104588965	104588999	(40549637)	+	(CGC)n	Simple_repeat	1	35	(0)	3943936
13	18.9	6.0	1.9	chr8	104589053	104589102	(40549534)	+	(GCCGCCC)n	Simple_repeat	1	53	(0)	3943937
20	28.3	3.6	1.2	chr8	106270272	106270354	(38868282)	+	(CGC)n	Simple_repeat	1	86	(0)	3946268
13	27.0	3.8	0.0	chr8	106270443	106270495	(38868141)	+	(GCGCCTG)n	Simple_repeat	1	55	(0)	3946269
1879	25.7	5.2	4.1	chr8	106796803	106797436	(38341200)	+	MLT1E1A	LTR/ERVL-MaLR	21	679	(1)	3947090
472	25.6	4.7	0.6	chr8	106797439	106797603	(38341033)	+	MIR	SINE/MIR	90	261	(1)	3947088
280	24.3	0.0	2.6	chr8	109557480	109557555	(35581081)	+	MER5B	DNA/hAT-Charlie	5	78	(100)	3951012
1709	23.2	9.5	4.2	chr8	109557592	109558117	(35580519)	C	MLT1F1	LTR/ERVL-MaLR	(8)	561	5	3951013
1349	30.0	4.4	7.3	chr8	111827915	111828478	(33310158)	C	MLT1F2	LTR/ERVL-MaLR	(4)	556	10	3954013
2690	28.2	9.9	8.7	chr8	117505743	117507477	(27631159)	+	L2a	LINE/L2	1650	3421	(5)	3961700
29	20.9	1.3	3.9	chr8	118630971	118631047	(26507589)	+	(AT)n	Simple_repeat	1	78	(0)	3963619
370	13.4	0.0	0.0	chr8	118631062	118631128	(26507508)	+	MLT2B5	LTR/ERVL	489	555	(0)	3963620
1938	21.4	6.2	1.5	chr8	118631129	118631587	(26507049)	C	MLT1F1	LTR/ERVL-MaLR	(45)	524	43	3963621
238	23.0	3.9	3.9	chr8	119470059	119470134	(25668502)	+	L1MC	LINE/L1	2955	3034	(3112)	3964863
697	26.2	8.0	3.5	chr8	119470151	119470628	(25668008)	+	MLT1F	LTR/ERVL-MaLR	26	595	(0)	3964865
557	21.2	0.0	3.3	chr8	119470684	119470805	(25667831)	C	L1M4b	LINE/L1	(5689)	1178	1061	3964866
2171	23.5	2.8	1.2	chr8	120357056	120357615	(24781021)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	3966471
1830	18.1	12.5	9.4	chr8	120642939	120643275	(24495361)	C	MLT1F1	LTR/ERVL-MaLR	(59)	510	128	3966922
2431	22.2	6.9	0.0	chr8	123982575	123983102	(21155534)	C	MLT1F1	LTR/ERVL-MaLR	(2)	567	1	3972900
1808	21.2	8.0	6.2	chr8	124368389	124368925	(20769711)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	3973575
2823	19.2	2.4	1.7	chr8	124832190	124832728	(20305908)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	6	3974443
1822	23.1	3.8	3.1	chr8	125522714	125523075	(19615561)	+	MLT1F2	LTR/ERVL-MaLR	137	502	(58)	3975804
1950	15.0	0.3	0.3	chr8	125523076	125523368	(19615268)	+	AluJb	SINE/Alu	6	298	(14)	3975805
325	28.2	13.2	5.5	chr8	125529113	125529318	(19609318)	C	MIRb	SINE/MIR	(6)	262	36	3975817
29	1.8	7.7	5.7	chr8	126814435	126814499	(18324137)	+	(TA)n	Simple_repeat	1	70	(0)	3978231
2020	10.1	0.4	0.8	chr8	126814500	126814515	(18324121)	+	AluY	SINE/Alu	287	302	(9)	3978230
1148	25.6	5.7	13.6	chr8	126814516	126815044	(18323592)	C	MLT1E1A	LTR/ERVL-MaLR	(30)	650	35	3978229
364	28.4	12.5	4.1	chr8	127725221	127725425	(17413211)	+	MIRb	SINE/MIR	5	231	(37)	3979935
1312	22.9	6.1	10.4	chr8	130564369	130564927	(14573709)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	52	3985334
1906	23.7	7.0	4.8	chr8	132118534	132119073	(13019563)	+	MLT1F2	LTR/ERVL-MaLR	1	553	(7)	3987949
210	32.0	2.6	0.0	chr8	132210382	132210456	(12928180)	+	MIRc	SINE/MIR	35	111	(157)	3988122
851	19.6	7.9	6.7	chr8	132210493	132210716	(12927920)	C	MLT1E1A	LTR/ERVL-MaLR	(18)	662	436	3988123
232	3.9	0.0	0.0	chr8	132210723	132210748	(12927888)	C	MLT1E1A	LTR/ERVL-MaLR	(355)	325	300	3988123
272	27.4	17.3	0.0	chr8	132210826	132210949	(12927687)	+	MIR	SINE/MIR	103	252	(10)	3988122
1183	23.0	5.6	3.6	chr8	132331935	132332359	(12806277)	+	MLT1F2	LTR/ERVL-MaLR	2	444	(104)	3988366
253	32.2	2.2	4.3	chr8	132332452	132332545	(12806091)	C	L3	LINE/CR1	(236)	3863	3772	3988367
778	21.0	6.2	0.6	chr8	133414107	133414274	(11724362)	C	MLT1E1A	LTR/ERVL-MaLR	(9)	671	494	3990397
7248	15.8	1.4	1.8	chr8	133414289	133415487	(11723149)	C	Tigger4	DNA/TcMar-Tigger	(1536)	1195	1	3990398
1562	19.0	3.2	0.7	chr8	135661981	135662282	(9476354)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	55	3994368
1274	23.7	8.4	5.8	chr8	135662279	135662694	(9475942)	C	MLT1F	LTR/ERVL-MaLR	(119)	429	2	3994370
239	35.1	7.7	1.8	chr8	136889180	136889350	(8249286)	C	MIRb	SINE/MIR	(20)	248	67	3996358
1569	24.6	3.4	4.4	chr8	140122072	140122463	(5016173)	+	MLT1E1A	LTR/ERVL-MaLR	213	680	(0)	4001393
1886	19.6	18.9	4.5	chr8	140291544	140292115	(4846521)	+	MLT1E1A	LTR/ERVL-MaLR	8	680	(0)	4001689
2293	11.8	0.0	0.0	chr8	140591838	140592134	(4546502)	+	AluSq2	SINE/Alu	1	297	(16)	4002217
196	34.2	2.6	2.6	chr8	140592383	140592460	(4546176)	+	L2c	LINE/L2	3240	3317	(70)	4002218
15	5.5	0.0	0.0	chr8	140791165	140791183	(4347453)	+	(TG)n	Simple_repeat	1	19	(0)	4002597
689	24.8	6.6	0.0	chr8	140791200	140791340	(4347296)	C	FAM	SINE/Alu	(34)	151	1	4002598
727	26.6	0.6	0.0	chr8	141880957	141881133	(3257503)	C	MLT1F1	LTR/ERVL-MaLR	(30)	539	362	4004250
378	17.2	0.0	0.0	chr8	141881132	141881195	(3257441)	C	MLT1F1	LTR/ERVL-MaLR	(144)	425	362	4004251
360	20.3	0.0	0.0	chr8	141881194	141881257	(3257379)	C	MLT1F1	LTR/ERVL-MaLR	(147)	401	338	4004251
1374	25.3	8.3	3.5	chr8	141881256	141881657	(3256979)	C	MLT1F1	LTR/ERVL-MaLR	(144)	425	3	4004252
2129	16.9	7.0	6.7	chr8	142895831	142896311	(2242325)	C	LTR2B	LTR/ERV1	(0)	483	1	4005421
592	23.6	13.2	8.9	chr8	143245688	143245933	(1892703)	+	MLT1E1	LTR/ERVL-MaLR	366	623	(31)	4005972
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
3182	13.4	3.4	3.3	chr8	143753754	143754249	(1384387)	C	L1M4c	LINE/L1	(5496)	888	379	4006607
1470	23.9	6.2	5.5	chr8	143754255	143754616	(1384020)	C	MLT1F2	LTR/ERVL-MaLR	(12)	548	185	4006616
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
2290	9.6	0.7	0.3	chr8	144196816	144197118	(941518)	+	AluSg	SINE/Alu	1	304	(6)	4007275
1391	21.4	7.9	2.2	chr8	144197119	144197417	(941219)	C	MLT1F	LTR/ERVL-MaLR	(65)	483	159	4007274
2315	7.1	0.0	0.0	chr8	144197418	144197734	(940902)	C	AluY	SINE/Alu	(0)	311	1	4007276
13	23.2	0.0	5.9	chr8	144530282	144530332	(608304)	+	G-rich	Low_complexity	1	51	(0)	4007708
5445	17.8	7.2	6.4	chr8	144654535	144655819	(482817)	+	MER52C	LTR/ERV1	10	1278	(0)	4007871
275	5.4	2.1	3.6	chr9	10001	10433	(138384284)	+	(TAACCC)n	Simple_repeat	1	442	(0)	4008489
3831	12.7	31.0	1.2	chr9	10436	11574	(138383143)	C	TAR1	Satellite/telo	(13)	2098	469	4008490
2117	24.3	7.2	2.1	chr9	2245622	2246150	(136148567)	+	MLT1F2	LTR/ERVL-MaLR	3	560	(0)	4011859
3338	26.8	10.4	6.0	chr9	2246151	2246339	(136148378)	+	L1MC4	LINE/L1	7710	7886	(156)	4011856
79	0.7	14.8	0.0	chr9	6708589	6708737	(131685980)	+	(TA)n	Simple_repeat	1	171	(0)	4018561
1849	20.8	4.6	11.9	chr9	6708738	6709057	(131685660)	+	LTR27D	LTR/ERV1	184	479	(136)	4018560
391	32.8	6.7	1.5	chr9	8792884	8793081	(129601636)	C	MIRc	SINE/MIR	(5)	263	55	4021569
1517	25.0	11.2	2.7	chr9	8793084	8793572	(129601145)	+	MLT1F	LTR/ERVL-MaLR	4	539	(9)	4021570
2337	20.7	4.2	0.6	chr9	12954276	12954776	(125439941)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	50	4026966
15	6.5	5.7	2.7	chr9	13513119	13513137	(124881580)	+	(AGA)n	Simple_repeat	1	20	(0)	4027745
20	11.3	0.0	0.0	chr9	14395308	14395336	(123999381)	+	(A)n	Simple_repeat	1	29	(0)	4028918
30	0.0	0.0	0.0	chr9	14395727	14395754	(123998963)	+	(T)n	Simple_repeat	1	28	(0)	4028919
1944	21.9	7.8	1.2	chr9	14411706	14412196	(123982521)	+	MLT1F	LTR/ERVL-MaLR	12	537	(11)	4028933
1482	22.1	5.2	7.6	chr9	14414925	14415534	(123979183)	C	MLT1E1A	LTR/ERVL-MaLR	(2)	678	6	4028940
1213	28.5	9.8	7.1	chr9	18018322	18018857	(120375860)	+	MLT1F2	LTR/ERVL-MaLR	1	552	(8)	4034106
5647	21.9	5.8	1.4	chr9	18018863	18020121	(120374596)	+	MLT1F2-int	LTR/ERVL-MaLR	1	1319	(170)	4034106
661	26.8	4.8	5.6	chr9	18185085	18185317	(120209400)	+	MLT1E1A	LTR/ERVL-MaLR	11	241	(319)	4034310
986	21.2	6.0	4.2	chr9	18185300	18185560	(120209157)	+	MLT1E1A	LTR/ERVL-MaLR	415	680	(0)	4034310
2181	8.1	0.0	6.2	chr9	19380563	19380869	(119013848)	+	AluSx1	SINE/Alu	1	288	(24)	4036215
23	17.4	2.9	4.2	chr9	34652148	34652217	(103742500)	+	(GCGAGG)n	Simple_repeat	1	72	(0)	4057744
13	19.8	4.0	3.9	chr9	34652418	34652467	(103742250)	+	(TGCATG)n	Simple_repeat	1	52	(0)	4057745
2152	13.2	0.0	2.2	chr9	34865281	34865599	(103529118)	+	AluSx1	SINE/Alu	1	312	(0)	4058036
19263	12.4	3.8	1.9	chr9	34865600	34865665	(103529052)	+	L1M1	LINE/L1	3371	3415	(4150)	4058033
1086	23.1	10.9	10.0	chr9	34865667	34866085	(103528632)	C	MLT1F2	LTR/ERVL-MaLR	(102)	458	36	4058037
497	20.6	13.7	0.0	chr9	36006075	36006181	(102388536)	+	MLT1E1	LTR/ERVL-MaLR	1	124	(436)	4059770
1386	23.8	1.5	5.3	chr9	36006183	36006537	(102388180)	+	MLT1E1	LTR/ERVL-MaLR	312	652	(2)	4059770
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
253	26.1	0.0	0.0	chr9	70038639	70038703	(68356014)	+	MER102a	DNA/hAT-Charlie	90	154	(176)	4082516
1518	19.0	3.9	2.5	chr9	75011388	75011666	(63383051)	C	AluJr4	SINE/Alu	(28)	284	2	4090369
664	26.7	1.7	9.8	chr9	75011718	75012033	(63382684)	+	MLT1E2	LTR/ERVL-MaLR	261	550	(77)	4090368
17	16.4	0.0	0.0	chr9	75028093	75028126	(63366591)	+	(GCC)n	Simple_repeat	1	34	(0)	4090399
1116	26.7	2.2	4.8	chr9	77123529	77124109	(61270608)	+	MLT1E1A	LTR/ERVL-MaLR	1	680	(0)	4093785
16	0.0	0.0	0.0	chr9	79624178	79624194	(58770523)	+	(A)n	Simple_repeat	1	17	(0)	4097518
1998	21.7	6.1	8.4	chr9	81973866	81974439	(56420278)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	4100852
1596	23.9	4.7	6.9	chr9	83086445	83087011	(55307706)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	5	4102354
1635	19.5	17.7	4.6	chr9	83610144	83610622	(54784095)	+	MLT1F2	LTR/ERVL-MaLR	1	555	(5)	4103180
736	20.2	0.9	0.0	chr9	83610713	83610826	(54783891)	C	AluJr	SINE/Alu	(195)	117	3	4103181
1137	26.8	13.4	3.5	chr9	87753370	87753717	(50641000)	C	MLT1F1	LTR/ERVL-MaLR	(107)	462	75	4109949
1597	25.0	4.6	4.6	chr9	88162660	88163250	(50231467)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	1	4110585
985	29.2	4.7	2.8	chr9	88715575	88715926	(49678791)	+	MLT1F2	LTR/ERVL-MaLR	192	550	(10)	4111630
586	26.1	6.2	4.8	chr9	89519160	89519606	(48875111)	+	MLT1F	LTR/ERVL-MaLR	106	529	(26)	4112591
1666	21.0	6.0	2.6	chr9	92961594	92962008	(45432709)	C	MLT1F	LTR/ERVL-MaLR	(50)	498	69	4117481
509	30.2	12.2	6.0	chr9	93091115	93091407	(45303310)	+	L2a	LINE/L2	2802	3135	(291)	4117699
2147	23.9	4.8	1.7	chr9	93091414	93091941	(45302776)	C	MLT1F	LTR/ERVL-MaLR	(3)	545	1	4117703
1992	23.3	3.5	1.7	chr9	93148674	93149198	(45245519)	+	MLT1F	LTR/ERVL-MaLR	8	542	(6)	4117796
249	26.4	5.4	0.0	chr9	93149210	93149296	(45245421)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	320	4117797
409	26.2	2.3	1.6	chr9	93468748	93468875	(44925842)	C	L1ME4c	LINE/L1	(373)	457	329	4118217
1804	23.3	5.2	0.7	chr9	93724350	93724773	(44669944)	+	MLT1F1	LTR/ERVL-MaLR	114	557	(12)	4118492
1585	26.1	11.2	3.9	chr9	95661710	95662220	(42732497)	C	MLT1F2	LTR/ERVL-MaLR	(7)	553	1	4121549
267	25.9	0.0	0.0	chr9	96071768	96071825	(42322892)	+	Zaphod2	DNA/hAT-Tip100	3456	3513	(11)	4122164
489	35.1	13.6	0.5	chr9	96071865	96072236	(42322481)	+	L2a	LINE/L2	2914	3341	(85)	4122165
186	34.2	5.1	3.9	chr9	96140205	96140359	(42254358)	C	LFSINE_Vert	SINE/tRNA	(299)	160	4	4122287
275	33.7	8.5	1.1	chr9	96853946	96854119	(41540598)	C	MIR	SINE/MIR	(54)	208	21	4123559
14	23.2	4.7	3.0	chr9	96854182	96854245	(41540472)	+	(CCCCGCA)n	Simple_repeat	1	67	(0)	4123560
1346	21.2	13.2	4.5	chr9	98582089	98582600	(39812117)	+	MLT1E3	LTR/ERVL-MaLR	44	624	(0)	4126798
406	29.7	6.1	0.5	chr9	98582605	98582790	(39811927)	+	Charlie18a	DNA/hAT-Charlie	66	262	(80)	4126799
1430	22.2	4.0	12.4	chr9	107761967	107762408	(30632309)	+	MLT1E1A	LTR/ERVL-MaLR	278	680	(0)	4141532
2095	21.2	9.8	3.4	chr9	108092592	108093089	(30301628)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	14	4142182
1519	24.4	7.8	5.3	chr9	108686358	108686902	(29707815)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	4143130
2213	21.5	4.4	7.1	chr9	108769969	108770528	(29624189)	+	MLT1F2	LTR/ERVL-MaLR	1	544	(16)	4143277
2248	22.0	5.8	2.4	chr9	109001375	109001923	(29392794)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	4143632
1504	21.6	16.1	9.5	chr9	109617256	109617772	(28776945)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	3	4144854
1930	20.5	6.0	2.4	chr9	112721060	112721479	(25673238)	+	MLT1F	LTR/ERVL-MaLR	56	491	(57)	4150371
2143	12.6	0.3	0.0	chr9	112721488	112721781	(25672936)	C	AluSg	SINE/Alu	(15)	295	1	4150372
2060	24.9	4.1	8.4	chr9	114006567	114007149	(24387568)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	2	4152796
1441	26.5	10.4	7.0	chr9	116671527	116672053	(21722664)	+	MLT1F2	LTR/ERVL-MaLR	14	560	(0)	4157854
2082	14.6	2.7	0.0	chr9	116672093	116672379	(21722338)	+	AluJb	SINE/Alu	2	296	(16)	4157855
280	25.0	0.0	0.0	chr9	121459895	121459962	(16934755)	C	MER112	DNA/hAT-Charlie	(16)	245	178	4167012
12	26.1	4.9	1.6	chr9	121460133	121460193	(16934524)	+	(CTTTGT)n	Simple_repeat	1	64	(0)	4167013
15	25.2	0.0	0.0	chr9	124097874	124097916	(14296801)	+	(ACACAC)n	Simple_repeat	1	43	(0)	4171911
13	28.4	0.0	5.2	chr9	124097917	124097931	(14296786)	+	(ACAT)n	Simple_repeat	1	58	(0)	4171912
1016	23.4	1.1	4.1	chr9	124098028	124098317	(14296400)	+	MLT1E1A	LTR/ERVL-MaLR	400	680	(0)	4171913
1913	25.4	6.9	4.8	chr9	125119635	125120197	(13274520)	C	MLT1G1	LTR/ERVL-MaLR	(3)	576	1	4173932
2857	1.0	0.0	0.6	chr9	125199788	125200098	(13194619)	+	AluYb8	SINE/Alu	1	309	(9)	4174123
371	13.6	0.0	4.5	chr9	125200139	125200204	(13194513)	C	AluYe5	SINE/Alu	(10)	300	238	4174124
2622	18.9	5.5	0.2	chr9	126981752	126982270	(11412447)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	1	4177439
496	29.5	4.6	2.8	chr9	126982271	126982313	(11412404)	C	MIR	SINE/MIR	(178)	84	33	4177438
722	24.3	0.0	2.8	chr9	126982322	126982503	(11412214)	+	MIRb	SINE/MIR	64	240	(28)	4177440
2066	25.4	8.0	1.9	chr9	127079377	127079901	(11314816)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	4177591
292	29.9	8.7	5.8	chr9	128127246	128127401	(10267316)	C	MIRc	SINE/MIR	(82)	186	26	4179816
191	38.0	6.6	2.8	chr9	129036086	129036261	(9358456)	C	L2c	LINE/L2	(58)	3329	3147	4181935
1066	17.9	6.2	0.0	chr9	129310940	129311134	(9083583)	C	MLT1F	LTR/ERVL-MaLR	(8)	540	333	4182540
19	17.6	2.0	2.0	chr9	129311311	129311344	(9083373)	+	(GAAT)n	Simple_repeat	1	34	(0)	4182541
655	23.4	14.2	10.7	chr9	130227719	130228178	(8166539)	C	MLT1F2	LTR/ERVL-MaLR	(4)	565	120	4184610
1355	14.7	4.0	15.0	chr9	130228183	130228523	(8166194)	C	AluJb	SINE/Alu	(10)	302	1	4184611
1981	19.7	5.5	0.9	chr9	130763455	130763890	(7630827)	C	MLT1F	LTR/ERVL-MaLR	(87)	461	5	4185754
5142	20.7	5.3	7.5	chr9	132910324	132910425	(5484292)	C	Charlie1a	DNA/hAT-Charlie	(1375)	80	2	4189704
840	22.6	0.0	1.8	chr9	132926182	132926349	(5468368)	+	FRAM	SINE/Alu	1	165	(11)	4189726
320	28.7	4.2	0.0	chr9	134269202	134269316	(4125401)	C	LTR16C	LTR/ERVL	(153)	336	217	4191816
567	24.0	4.4	0.0	chr9	134269367	134269541	(4125176)	C	MLT1E1A	LTR/ERVL-MaLR	(1)	623	441	4191817
616	23.8	10.8	3.2	chr9	134269563	134269919	(4124798)	C	MLT1E1A	LTR/ERVL-MaLR	(149)	478	152	4191817
23	25.6	2.7	0.0	chr9	134269984	134270057	(4124660)	+	(CCTTCAC)n	Simple_repeat	1	76	(0)	4191818
1094	30.6	10.0	0.8	chr9	134529763	134530351	(3864366)	+	L1MEd	LINE/L1	460	1108	(5978)	4192133
1409	26.8	6.5	4.7	chr9	134530361	134530830	(3863887)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	70	4192136
1103	27.3	6.2	3.8	chr9	134530837	134531379	(3863338)	+	L1MEd	LINE/L1	1154	1689	(5397)	4192133
845	26.9	6.7	0.4	chr9	134958154	134958392	(3436325)	C	ERVL-E-int	LTR/ERVL	(0)	5667	5413	4192591
1831	27.2	6.5	3.9	chr9	134958393	134958932	(3435785)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	6	4192592
1646	23.9	15.0	0.0	chr9	134965439	134965915	(3428802)	+	MLT1F1	LTR/ERVL-MaLR	9	569	(0)	4192599
32	0.0	0.0	0.0	chr9	135603536	135603565	(2791152)	+	(TTCT)n	Simple_repeat	1	30	(0)	4193432
1786	12.5	2.7	0.4	chr9	135603567	135603822	(2790895)	C	AluSx	SINE/Alu	(9)	303	42	4193433
553	20.3	8.9	4.7	chr9	136990384	136990533	(1404184)	C	L2a	LINE/L2	(0)	3426	3270	4195086
374	27.4	10.9	2.4	chr9	136990534	136990742	(1403975)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	332	4195087
303	21.8	7.4	4.4	chr9	136990793	136990883	(1403834)	C	MLT1F2	LTR/ERVL-MaLR	(426)	134	41	4195087
410	27.5	11.3	3.4	chr9	136990908	136991174	(1403543)	C	L2a	LINE/L2	(147)	3279	2989	4195086
13	11.4	7.5	2.3	chr9	137454316	137454355	(940362)	+	(GCAGCAA)n	Simple_repeat	1	43	(0)	4195655
343	25.0	4.0	1.2	chr9	137466049	137466218	(928499)	+	MER74B	LTR/ERVL	250	424	(198)	4195659
1265	28.0	8.3	4.9	chrX	3454204	3454736	(152586159)	+	MLT1F2	LTR/ERVL-MaLR	7	559	(1)	4364886
206	29.2	0.0	5.3	chrX	3454828	3454903	(152585992)	+	MIR	SINE/MIR	76	147	(115)	4364887
21	18.1	4.5	2.9	chrX	7469273	7469338	(148571557)	+	(TATCTA)n	Simple_repeat	1	69	(0)	4371750
828	24.9	1.4	2.3	chrX	7469478	7469695	(148571200)	+	MLT1F2	LTR/ERVL-MaLR	342	557	(3)	4371751
960	29.7	5.5	2.7	chrX	7469696	7470206	(148570689)	C	Tigger13a	DNA/TcMar-Tigger	(245)	526	1	4371752
1994	21.9	7.0	1.9	chrX	9303341	9303857	(146737038)	+	MLT1F	LTR/ERVL-MaLR	4	548	(0)	4374524
1877	22.7	4.5	9.2	chrX	10435064	10435650	(145605245)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	1	4376483
1829	22.2	9.5	5.8	chrX	13462764	13463280	(142577615)	+	MLT1F	LTR/ERVL-MaLR	11	548	(0)	4381223
1924	22.7	7.9	9.0	chrX	13799893	13800459	(142240436)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	4381757
1806	24.2	2.4	4.9	chrX	17173082	17173617	(138867278)	C	MLT1E1A	LTR/ERVL-MaLR	(2)	678	49	4387412
1241	25.2	13.7	4.0	chrX	18035961	18036440	(138004455)	+	MLT1H1	LTR/ERVL-MaLR	11	544	(11)	4388804
2024	23.4	4.3	7.3	chrX	18694935	18695510	(137345385)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	1	4389996
1314	17.3	1.4	1.4	chrX	18971685	18971907	(137068988)	C	MLT1F	LTR/ERVL-MaLR	(8)	540	318	4390474
2935	25.3	13.5	3.2	chrX	18971908	18973013	(137067882)	C	L1MEi	LINE/L1	(918)	5228	3962	4390475
1929	21.7	9.5	3.3	chrX	19385044	19385554	(136655341)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	1	4391258
1080	22.0	1.3	0.0	chrX	20295565	20295791	(135745104)	+	MLT1F	LTR/ERVL-MaLR	316	545	(3)	4392899
1464	21.1	0.7	0.7	chrX	24303695	24303966	(131736929)	+	LTR40a	LTR/ERVL	248	519	(0)	4399268
526	29.8	10.6	1.8	chrX	24303967	24304130	(131736765)	C	LTR105_Mam	LTR/ERVL	(412)	188	9	4399267
1515	21.2	10.7	5.4	chrX	24583067	24583545	(131457350)	+	MLT1F1	LTR/ERVL-MaLR	51	557	(12)	4399774
2008	25.4	4.0	4.5	chrX	29754797	29755345	(126285550)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	15	4407236
213	25.4	1.4	6.6	chrX	31546171	31546246	(124494649)	C	MIR	SINE/MIR	(10)	252	181	4409965
886	27.0	11.3	9.6	chrX	38117500	38118043	(117922852)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	1	4418442
1557	25.2	9.4	7.1	chrX	38185967	38186461	(117854434)	+	MLT1F2	LTR/ERVL-MaLR	3	510	(50)	4418555
1655	18.7	5.1	5.8	chrX	38291774	38292333	(117748562)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	4418711
1795	24.2	4.6	7.6	chrX	38574812	38575389	(117465506)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	4419202
2180	12.8	0.3	0.0	chrX	39924135	39924431	(116116464)	+	AluSx1	SINE/Alu	1	298	(14)	4421450
2321	19.6	5.9	5.6	chrX	39924432	39924863	(116116032)	+	MLT1F2	LTR/ERVL-MaLR	124	560	(0)	4421449
881	14.6	2.3	0.0	chrX	39950758	39950887	(116090008)	C	AluSz6	SINE/Alu	(179)	133	1	4421507
1462	18.3	8.2	0.6	chrX	39950928	39951241	(116089654)	C	MLT1F	LTR/ERVL-MaLR	(7)	541	202	4421508
265	21.3	1.6	1.6	chrX	39951232	39951293	(116089602)	C	MLT1F	LTR/ERVL-MaLR	(507)	62	1	4421508
2771	16.1	10.5	1.7	chrX	40021611	40022128	(116018767)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	4421648
19	29.7	3.8	1.2	chrX	40154959	40155038	(115885857)	+	(CG)n	Simple_repeat	1	83	(0)	4421862
16	25.9	0.0	2.2	chrX	40155037	40155092	(115885803)	+	G-rich	Low_complexity	1	54	(0)	4421863
58	26.5	0.7	0.0	chrX	40222779	40222919	(115817976)	+	GA-rich	Low_complexity	1	142	(0)	4422008
1119	18.5	6.8	4.1	chrX	40222922	40223163	(115817732)	+	MLT1E1A	LTR/ERVL-MaLR	432	680	(0)	4422005
1777	27.3	4.8	6.3	chrX	40223205	40223225	(115817670)	+	LTR82B	LTR/ERVL	1	21	(809)	4422009
1605	18.9	4.6	8.0	chrX	40223226	40223516	(115817379)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	124	4422010
2290	20.2	10.2	0.0	chrX	40289689	40290174	(115750721)	C	MLT1F	LTR/ERVL-MaLR	(7)	541	1	4422161
3223	17.6	1.5	0.7	chrX	40410177	40410713	(115630182)	+	MLT1F	LTR/ERVL-MaLR	1	541	(7)	4422414
1472	26.3	8.3	2.4	chrX	43169551	43170061	(112870834)	+	MLT1F2	LTR/ERVL-MaLR	1	544	(16)	4426969
2396	8.6	0.0	0.3	chrX	47141560	47141860	(108899035)	+	AluSc	SINE/Alu	1	300	(9)	4433473
714	22.9	5.7	11.0	chrX	47141861	47142131	(108898764)	+	MLT1H2	LTR/ERVL-MaLR	238	488	(1)	4433471
1731	23.9	10.2	4.5	chrX	47729414	47729940	(108310955)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	4434735
662	30.9	5.9	7.4	chrX	47729941	47730073	(108310822)	C	L1MEj	LINE/L1	(928)	1232	1092	4434733
1999	23.1	11.2	3.5	chrX	47761461	47761975	(108278920)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	4434797
1177	22.6	15.9	7.1	chrX	48626172	48626638	(107414257)	C	MLT1F2	LTR/ERVL-MaLR	(44)	516	1	4436486
2755	18.9	2.0	4.8	chrX	48663032	48663608	(107377287)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	4436582
1486	25.2	5.8	6.8	chrX	49024500	49025056	(107015839)	+	MLT1F2	LTR/ERVL-MaLR	1	551	(9)	4437332
1099	17.8	2.5	2.5	chrX	49025061	49025159	(107015736)	+	L1MD3	LINE/L1	7743	7842	(153)	4437333
15	19.6	2.0	3.9	chrX	49043230	49043279	(106997616)	+	(GCCCG)n	Simple_repeat	1	51	(0)	4437371
18	15.3	0.0	2.6	chrX	49043454	49043492	(106997403)	+	(CCT)n	Simple_repeat	1	39	(0)	4437372
1818	16.4	0.0	0.0	chrX	49345995	49346281	(106694614)	C	AluSx	SINE/Alu	(25)	287	1	4437942
2267	10.7	1.0	1.3	chrX	53343613	53343922	(102696973)	+	AluSq	SINE/Alu	2	310	(3)	4443528
1430	20.6	4.6	22.9	chrX	53343923	53344270	(102696625)	C	MLT1F2	LTR/ERVL-MaLR	(61)	499	182	4443527
1781	14.6	0.0	10.9	chrX	53344271	53344620	(102696275)	C	AluJo	SINE/Alu	(0)	312	1	4443529
1419	20.3	5.3	13.0	chrX	54428328	54428758	(101612137)	+	MLT1E1A	LTR/ERVL-MaLR	283	678	(2)	4445773
457	29.8	10.8	4.9	chrX	54428759	54428984	(101611911)	+	L2c	LINE/L2	1182	1422	(1997)	4445770
439	28.4	12.8	0.5	chrX	69168748	69168931	(86871964)	+	Charlie17a	DNA/hAT-Charlie	1	210	(7)	4457685
1515	24.8	7.4	3.8	chrX	69168984	69169335	(86871560)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	190	4457686
37	2.9	0.0	0.0	chrX	69169336	69169371	(86871524)	+	(GA)n	Simple_repeat	1	36	(0)	4457687
1515	24.8	7.4	3.8	chrX	69169372	69169463	(86871432)	C	MLT1F2	LTR/ERVL-MaLR	(371)	189	99	4457686
2380	21.7	5.5	2.5	chrX	86055331	86055855	(69985040)	+	MLT1F	LTR/ERVL-MaLR	1	542	(6)	4477671
1106	32.2	9.0	1.1	chrX	98084949	98085418	(57955477)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	45	4491584
402	34.1	2.1	0.0	chrX	105786294	105786431	(50254464)	C	MLT1J	LTR/ERVL-MaLR	(208)	304	164	4502036
930	22.8	14.2	0.8	chrX	105786436	105786678	(50254217)	C	MLT1F2	LTR/ERVL-MaLR	(8)	552	272	4502037
584	25.8	2.5	2.5	chrX	105786694	105786856	(50254039)	C	MLT1F2	LTR/ERVL-MaLR	(347)	165	3	4502037
2033	9.1	0.0	0.0	chrX	107275038	107275289	(48765606)	C	AluSq2	SINE/Alu	(13)	300	49	4503912
2628	19.4	5.4	2.0	chrX	109860712	109861252	(46179643)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	4507476
272	34.2	7.5	2.1	chrX	110417923	110418110	(45622785)	C	L2c	LINE/L2	(157)	3230	3032	4508391
2137	25.2	5.7	1.1	chrX	110566814	110567347	(45473548)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	4508600
1548	22.1	20.6	1.7	chrX	111328556	111329015	(44711880)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	4509691
21	25.2	0.0	4.2	chrX	115350487	115350558	(40690337)	+	A-rich	Low_complexity	1	72	(0)	4515353
17	29.1	2.9	1.4	chrX	115350488	115350557	(40690338)	+	GA-rich	Low_complexity	1	72	(0)	4515354
13	14.0	7.3	2.3	chrX	115350868	115350908	(40689987)	+	(GCCA)n	Simple_repeat	1	44	(0)	4515355
27006	3.0	0.5	0.1	chrX	116964807	116970835	(39070060)	C	L1PA2	LINE/L1	(0)	6155	124	4517205
6503	7.7	14.7	13.3	chrX	119027531	119028764	(37012131)	C	LTR12D	LTR/ERV1	(0)	1254	1	4520334
9826	13.5	3.4	0.2	chrX	122312925	122314453	(33726442)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	4525346
727	19.3	1.7	8.3	chrX	123784868	123784981	(32255914)	+	L1MEg	LINE/L1	5393	5504	(676)	4527320
546	32.7	10.7	0.6	chrX	123906228	123906538	(32134357)	+	L2c	LINE/L2	2311	2656	(763)	4527673
441	29.7	5.2	12.3	chrX	123906563	123906935	(32133960)	+	L2c	LINE/L2	3039	3383	(4)	4527673
2422	22.6	1.3	1.5	chrX	133842787	133843182	(22197713)	+	MLT1F	LTR/ERVL-MaLR	1	399	(149)	4541661
2473	16.4	2.8	0.5	chrX	133843183	133843598	(22197297)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	4541662
2000	16.4	0.7	0.0	chrX	134536586	134536895	(21504000)	+	AluJo	SINE/Alu	1	312	(0)	4542910
619	25.7	4.8	5.5	chrX	134536896	134537150	(21503745)	C	MLT1K	LTR/ERVL-MaLR	(327)	268	16	4542909
2190	12.4	0.0	0.0	chrX	136058186	136058484	(19982411)	+	AluSx	SINE/Alu	1	299	(13)	4545293
1039	27.0	1.5	3.6	chrX	136058493	136058567	(19982328)	C	L1ME1	LINE/L1	(16)	6163	6090	4545294
2365	8.1	0.0	3.4	chrX	136058568	136058889	(19982006)	+	AluSq2	SINE/Alu	1	311	(2)	4545295
7576	2.9	0.0	0.2	chrX	144504001	144504936	(11535959)	+	L1PA4	LINE/L1	5222	6155	(0)	4557937
1456	20.6	2.4	1.8	chrX	144504940	144505225	(11535670)	+	MLT1F1	LTR/ERVL-MaLR	280	567	(2)	4557934
2547	19.5	9.9	2.5	chrX	150577932	150578526	(5462369)	+	MLT1E1A	LTR/ERVL-MaLR	35	678	(2)	4566127
2992	21.4	8.5	6.5	chrX	150578528	150579005	(5461890)	C	L1ME2z	LINE/L1	(1139)	5007	4515	4566126
2781	20.9	1.8	2.5	chrX	151967851	151968405	(4072490)	+	MLT1F2	LTR/ERVL-MaLR	1	551	(9)	4568343
1819	26.8	6.0	2.4	chrX	153214948	153215456	(2825439)	+	MLT1F2	LTR/ERVL-MaLR	30	558	(2)	4569979
238	35.3	1.9	2.5	chrX	153565704	153565863	(2475032)	+	L2	LINE/L2	1842	2000	(1419)	4570409
22	3.6	0.0	0.0	chrX	154428788	154428816	(1612079)	+	(GGC)n	Simple_repeat	1	29	(0)	4571851
297	24.6	0.0	0.0	chrY	10627178	10627242	(46600173)	C	AluJo	SINE/Alu	(20)	292	228	4587825
890	21.9	0.8	0.9	chrY	10627274	10627798	(46599617)	+	(CCATT)n	Simple_repeat	3	528	(0)	4587826
149	10.5	1.4	1.4	chrY	10664579	10664856	(46562559)	+	(CCATT)n	Simple_repeat	1	282	(0)	4587925
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157