3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
20	24.4	0.0	4.4	chr1	19210179	19210246	(229746176)	+	(CCG)n	Simple_repeat	1	68	(0)	33227
32601	7.1	1.7	1.7	chr1	29794725	29796234	(219160188)	+	HERVL-int	LTR/ERVL	1	1540	(4114)	57305
185	22.5	3.6	12.1	chr1	29796235	29796325	(219160097)	+	MamRTE1	LINE/RTE-BovB	3493	3575	(237)	57307
32601	7.1	1.7	1.7	chr1	29796326	29799198	(219157224)	+	HERVL-int	LTR/ERVL	1541	4474	(1180)	57305
44494	6.1	0.5	0.2	chr1	38144850	38150489	(210805933)	+	HERVL-int	LTR/ERVL	1	5654	(0)	74159
11659	6.8	0.2	1.3	chr1	49440368	49441751	(199514671)	+	HERVL-int	LTR/ERVL	125	1493	(4161)	95210
2657	6.7	0.0	0.0	chr1	49441748	49442076	(199514346)	+	HERVL-int	LTR/ERVL	3990	4318	(1336)	95210
19274	7.0	1.3	0.0	chr1	65927540	65929983	(183026439)	C	HERVL-int	LTR/ERVL	(3178)	2476	1	126477
2032	13.9	0.9	2.2	chr1	70180117	70180439	(178775983)	C	7SLRNA	srpRNA	(0)	320	2	132953
42361	7.7	1.1	0.4	chr1	77182764	77187777	(171768645)	+	HERVL-int	LTR/ERVL	139	5210	(444)	142474
2403	8.5	0.0	0.0	chr1	88597617	88597909	(160358513)	+	AluYm1	SINE/Alu	2	294	(17)	158660
41811	6.7	1.6	0.7	chr1	88597910	88602327	(160354095)	+	HERVL-int	LTR/ERVL	1182	5654	(0)	158657
3635	28.8	1.8	9.4	chr1	91042293	91042770	(157913652)	+	HERVL-int	LTR/ERVL	1049	1527	(4140)	162139
14101	6.9	0.2	1.3	chr1	91042777	91044666	(157911756)	+	HERVL-int	LTR/ERVL	2319	4187	(1467)	162139
2309	11.6	0.0	0.3	chr1	91464983	91465285	(157491137)	C	AluSx1	SINE/Alu	(10)	302	1	162739
42249	6.3	1.0	1.4	chr1	91465286	91466415	(157490007)	C	HERVL-int	LTR/ERVL	(3944)	1710	578	162737
12874	7.1	2.9	0.3	chr1	92614948	92616640	(156339782)	+	HERVL-int	LTR/ERVL	1	1737	(3917)	164786
16382	7.0	0.6	0.5	chr1	94164123	94166151	(154790271)	C	HERVL-int	LTR/ERVL	(2288)	3366	1335	167383
4757	6.7	2.5	1.3	chr1	94166150	94166772	(154789650)	C	HERVL-int	LTR/ERVL	(5023)	631	1	167383
8008	13.1	10.8	3.0	chr1	102853604	102855052	(146101370)	+	LTR12C	LTR/ERV1	3	1579	(0)	179837
30116	10.0	0.6	2.0	chr1	104578578	104582127	(144374295)	C	HERVL-int	LTR/ERVL	(1691)	3963	468	181848
10089	13.5	1.9	0.8	chr1	105227057	105228513	(143727909)	+	THE1B-int	LTR/ERVL-MaLR	1	1475	(105)	182596
42781	8.3	0.9	0.6	chr1	106585691	106591329	(142365093)	C	HERVL-int	LTR/ERVL	(0)	5654	1	184229
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
2019	11.9	0.3	6.6	chr1	164410490	164410809	(84545613)	+	AluSx1	SINE/Alu	1	300	(12)	242047
9796	20.3	2.7	2.8	chr1	164410810	164411421	(84545001)	C	L1MB3	LINE/L1	(2575)	3565	2967	242045
2182	11.7	0.4	0.0	chr1	167381604	167381909	(81574513)	C	AluSz	SINE/Alu	(0)	312	1	246621
597	32.3	11.1	6.4	chr1	167382051	167382650	(81573772)	C	L2b	LINE/L2	(0)	3375	2734	246622
3046	20.2	6.6	5.3	chr1	167386485	167386935	(81569487)	+	L1ME1	LINE/L1	5582	6060	(119)	246625
44874	6.9	1.5	0.1	chr1	175242967	175248539	(73707883)	+	HERVL-int	LTR/ERVL	1	5654	(0)	258439
39838	10.6	1.7	0.6	chr1	189167994	189173584	(59782838)	+	HERVL-int	LTR/ERVL	1	5654	(0)	279221
38236	9.7	2.7	0.0	chr1	190669590	190675094	(58281328)	C	HERVL-int	LTR/ERVL	(0)	5654	2	281209
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
2399	8.9	0.3	0.0	chr1	200488024	200488305	(48468117)	+	AluSp	SINE/Alu	1	283	(30)	294358
44045	6.2	0.6	0.7	chr1	204235080	204240742	(44715680)	+	HERVL-int	LTR/ERVL	1	5654	(0)	301222
2327	9.1	0.0	0.0	chr1	228621129	228621435	(20334987)	+	AluY	SINE/Alu	1	307	(4)	338912
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
30037	9.4	1.3	1.2	chr1	232197077	232201638	(16754784)	C	HERVL-int	LTR/ERVL	(0)	5654	1022	344640
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
200	28.2	3.7	2.8	chr1	243979767	243979872	(4976550)	C	L2a	LINE/L2	(54)	3372	3266	363402
12950	8.3	0.1	0.1	chr10	16447745	16449379	(117348043)	C	HERVL-int	LTR/ERVL	(1979)	3675	2041	395840
771	8.7	0.0	3.9	chr10	16449424	16449526	(117347896)	C	AluSx3	SINE/Alu	(4)	307	209	395841
9336	11.5	5.7	5.8	chr10	16449527	16449831	(117347591)	C	HERVL-int	LTR/ERVL	(4100)	1554	1234	395840
183	24.6	4.2	12.7	chr10	16449832	16449910	(117347512)	C	L3	LINE/CR1	(3855)	244	173	395842
32828	8.6	1.7	1.3	chr10	45336971	45338269	(88459153)	+	HERVL-int	LTR/ERVL	1	1337	(4317)	435954
201	22.6	11.3	11.3	chr10	45338270	45338384	(88459038)	+	MER5B	DNA/hAT-Charlie	62	176	(2)	435955
32828	8.6	1.7	1.3	chr10	45338385	45341477	(88455945)	+	HERVL-int	LTR/ERVL	1338	4523	(1131)	435954
18850	8.6	1.7	1.7	chr10	54102316	54104556	(79692866)	C	HERVL-int	LTR/ERVL	(3073)	2581	360	448442
43473	7.4	1.3	0.5	chr10	61569216	61571867	(72225555)	C	HERVL-int	LTR/ERVL	(2953)	2701	1	458749
32402	6.8	0.8	0.2	chr10	71017231	71021414	(62776008)	C	HERVL-int	LTR/ERVL	(0)	5654	1446	474508
1103	11.0	0.7	0.0	chr10	71021418	71021571	(62775851)	C	HERVL-int	LTR/ERVL	(4709)	945	791	474508
10821	6.3	1.9	0.3	chr10	71021572	71022992	(62774430)	C	HERVL-int	LTR/ERVL	(4209)	1445	1	474509
44976	6.0	1.1	0.7	chr10	104462634	104468144	(29329278)	+	HERVL-int	LTR/ERVL	1	5537	(117)	530748
20595	6.6	0.1	0.2	chr10	133500001	133502509	(294913)	C	HERVL-int	LTR/ERVL	(3147)	2507	1	572574
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
43992	6.5	0.3	0.5	chr11	44544590	44550255	(90536367)	+	HERVL-int	LTR/ERVL	1	5654	(0)	640336
45750	7.0	0.6	0.1	chr11	78618928	78624549	(56462073)	+	HERVL-int	LTR/ERVL	1	5654	(0)	692370
31540	6.7	0.7	0.4	chr11	79124975	79128887	(55957735)	+	HERVL-int	LTR/ERVL	1	3927	(1727)	693329
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
36490	6.8	0.6	0.0	chr11	107233289	107237787	(27848835)	C	HERVL-int	LTR/ERVL	(1131)	4523	1	734607
19	3.5	3.5	0.0	chr11	127115897	127115925	(7970697)	+	(ATT)n	Simple_repeat	1	30	(0)	767080
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
36916	6.9	2.6	2.3	chr12	5819126	5822766	(127452543)	+	HERVL-int	LTR/ERVL	765	4420	(1234)	787566
1931	10.0	0.7	7.3	chr12	7997331	7997662	(125277647)	C	AluSx3	SINE/Alu	(0)	311	1	791589
15747	7.0	0.3	2.2	chr12	7997663	7998149	(125277160)	+	HERVL-int	LTR/ERVL	1409	1886	(3768)	791588
41629	9.0	1.1	0.1	chr12	14488651	14494248	(118781061)	C	HERVL-int	LTR/ERVL	(0)	5654	1	801436
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
37279	7.3	0.7	0.2	chr12	26776000	26781630	(106493679)	+	HERVL-int	LTR/ERVL	1	5654	(0)	818454
44131	7.5	1.1	0.1	chr12	46861346	46866940	(86408369)	C	HERVL-int	LTR/ERVL	(0)	5654	1	842791
28923	6.0	1.9	0.9	chr12	56398527	56400360	(76874949)	+	HERVL-int	LTR/ERVL	303	2118	(3536)	859469
44845	6.1	1.9	1.2	chr12	64132184	64134139	(69141170)	C	HERVL-int	LTR/ERVL	(2371)	3283	1371	870542
2557	9.1	0.0	0.0	chr12	64134140	64134435	(69140874)	+	AluY	SINE/Alu	1	296	(15)	870545
45998	6.1	0.7	0.9	chr12	64340412	64346075	(68929234)	C	HERVL-int	LTR/ERVL	(0)	5654	2	870939
16870	8.0	0.5	0.9	chr12	74276229	74278444	(58996865)	+	HERVL-int	LTR/ERVL	1	2207	(3447)	885993
2068	20.5	4.3	2.0	chr12	78242554	78243046	(55032263)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	891893
426	23.1	13.7	1.0	chr12	78243053	78243249	(55032060)	+	L2a	LINE/L2	3122	3347	(79)	891892
15040	7.0	0.8	0.8	chr12	79497710	79499637	(53775672)	C	HERVL-int	LTR/ERVL	(3393)	2261	328	893568
30492	15.7	2.8	0.1	chr12	81762708	81767744	(51507565)	+	ERVL-int	LTR/ERVL	541	5714	(0)	896836
18713	12.1	0.7	0.1	chr12	82205289	82207989	(51067320)	C	HERVL-int	LTR/ERVL	(2937)	2717	1	897442
14995	8.0	1.1	0.0	chr12	88209957	88211897	(45063412)	C	HERVL-int	LTR/ERVL	(3692)	1962	1	905208
30803	16.4	1.4	1.9	chr12	92713136	92714978	(40560331)	C	ERVL-int	LTR/ERVL	(737)	1861	2	911998
45626	5.7	0.5	1.2	chr12	117650447	117652035	(15623274)	+	HERVL-int	LTR/ERVL	1	1569	(4085)	960796
1911	10.6	0.3	0.3	chr12	117652036	117652318	(15622991)	+	L1PB1	LINE/L1	5869	6151	(0)	960797
904	24.1	14.1	9.7	chr13	44073342	44073628	(70290700)	+	L2a	LINE/L2	2978	3314	(112)	1029737
1224	20.1	12.9	1.9	chr13	44073629	44073896	(70290432)	+	AluJo	SINE/Alu	1	302	(10)	1029738
904	24.1	14.1	9.7	chr13	44073897	44074021	(70290307)	+	L2a	LINE/L2	3315	3411	(15)	1029737
46120	6.4	0.7	0.3	chr13	45753626	45759254	(68605074)	C	HERVL-int	LTR/ERVL	(0)	5654	1	1032782
235	27.4	6.7	0.0	chr13	61941626	61941709	(52422619)	C	L1MC5a	LINE/L1	(670)	2107	2018	1055385
1936	19.4	8.6	2.6	chr13	61941836	61944414	(52419914)	C	SATR1	Satellite	(44)	2733	1	1055386
7850	21.6	0.8	1.7	chr13	62145240	62146905	(52217423)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1	1055632
14469	8.8	1.8	0.4	chr13	63442058	63444018	(50920310)	+	HERVL-int	LTR/ERVL	1	1989	(3665)	1057284
11788	16.6	3.8	5.9	chr13	64977179	64983477	(49380851)	C	L1PA7	LINE/L1	(3)	6151	12	1059210
8715	12.5	8.6	4.1	chr13	67771971	67773473	(46590855)	C	LTR12C	LTR/ERV1	(0)	1579	3	1062702
1926	21.6	3.9	1.6	chr13	67912018	67914966	(46449362)	C	SATR2	Satellite	(168)	2609	1	1062863
1516	21.3	8.9	3.6	chr13	67915011	67915889	(46448439)	C	SATR1	Satellite	(65)	911	1	1062864
7865	7.0	19.8	0.2	chr13	68170797	68172063	(46192265)	+	LTR12C	LTR/ERV1	3	1579	(0)	1063192
5684	7.2	2.0	3.5	chr13	69221626	69222417	(45141911)	+	LTR17	LTR/ERV1	1	780	(0)	1064531
35442	7.6	0.9	1.4	chr13	74804240	74808893	(39555435)	+	HERVL-int	LTR/ERVL	1025	5654	(0)	1072440
590	31.8	4.0	1.6	chr13	77333488	77333605	(37030723)	+	L4_B_Mam	LINE/RTE-X	3972	4087	(854)	1076042
1041	26.8	9.4	10.3	chr13	77333606	77334130	(37030198)	+	LTR33A	LTR/ERVL	1	520	(0)	1076043
19	26.2	0.0	3.0	chr13	79405803	79405869	(34958459)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	1078870
12124	8.4	0.1	0.4	chr13	82387203	82388794	(31975534)	C	HERVL-int	LTR/ERVL	(3742)	1912	325	1082700
191	31.2	5.1	7.9	chr13	85760779	85760879	(28603449)	C	L2	LINE/L2	(2845)	574	477	1086966
891	17.3	1.2	0.6	chr13	85760886	85761048	(28603280)	C	LTR1A1	LTR/ERV1	(0)	799	636	1086967
734	16.9	2.1	4.7	chr13	85761049	85761196	(28603132)	+	AluJb	SINE/Alu	164	307	(5)	1086968
9219	13.1	3.2	5.7	chr13	88018065	88019684	(26344644)	+	THE1C-int	LTR/ERVL-MaLR	1	1578	(2)	1089782
2372	13.7	0.0	1.4	chr13	88019687	88020055	(26344273)	+	THE1C	LTR/ERVL-MaLR	1	364	(11)	1089782
31200	7.4	0.4	0.2	chr13	109219329	109224969	(5139359)	C	HERVL-int	LTR/ERVL	(0)	5654	1	1119761
11917	7.5	0.7	0.0	chr14	20567839	20569320	(86474398)	+	HERVL-int	LTR/ERVL	1	1492	(4162)	1128281
30591	7.1	1.0	0.2	chr14	20569321	20573123	(86470595)	+	HERVL-int	LTR/ERVL	1823	5654	(0)	1128281
16	8.5	0.0	0.0	chr14	39266882	39266906	(67776812)	+	(CGC)n	Simple_repeat	1	25	(0)	1155463
43622	7.5	1.3	0.1	chr14	39893672	39899252	(67144466)	+	HERVL-int	LTR/ERVL	1	5654	(0)	1156290
40556	6.2	0.4	0.2	chr14	57327543	57332548	(49711170)	C	HERVL-int	LTR/ERVL	(0)	5654	638	1180606
11100	12.1	0.6	0.6	chr14	62828739	62830369	(44213349)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	1188341
19	10.4	5.1	6.5	chr14	64504805	64504863	(42538855)	+	(CCGCGCG)n	Simple_repeat	1	62	(0)	1191410
41085	6.6	2.4	0.4	chr14	71459860	71464360	(35579358)	C	HERVL-int	LTR/ERVL	(0)	5654	1093	1202846
2143	12.1	0.0	0.0	chr14	71464361	71464642	(35579076)	+	AluSg	SINE/Alu	1	282	(28)	1202847
36326	6.4	1.1	0.3	chr14	71936518	71940970	(35102748)	C	HERVL-int	LTR/ERVL	(0)	5654	1168	1203544
3902	6.1	0.4	0.0	chr14	71940970	71941444	(35102274)	C	HERVL-int	LTR/ERVL	(5177)	477	1	1203544
40678	7.1	1.3	2.3	chr14	90227625	90229448	(16814270)	+	HERVL-int	LTR/ERVL	436	2256	(3398)	1233521
327	29.9	13.4	3.6	chr14	93139180	93139324	(13904394)	C	L2a	LINE/L2	(76)	3350	3203	1238891
1458	25.5	11.3	6.9	chr14	93139325	93139589	(13904129)	+	MER20B	DNA/hAT-Charlie	4	263	(520)	1238897
23740	6.6	2.1	1.1	chr14	93358031	93360931	(13682787)	+	HERVL-int	LTR/ERVL	1	2962	(2692)	1239358
290	30.3	2.2	1.1	chr14	96460357	96460446	(10583272)	C	LTR78	LTR/ERV1	(351)	953	863	1244942
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
274	31.4	4.8	7.3	chr15	75626243	75626393	(26364796)	+	L2b	LINE/L2	3221	3367	(8)	1351238
13222	8.9	1.9	2.1	chr15	79691628	79691987	(22299202)	C	HERVL-int	LTR/ERVL	(3930)	1724	1348	1358226
180	27.9	16.8	2.5	chr15	79691988	79692068	(22299121)	C	MamRTE1	LINE/RTE-BovB	(3314)	498	404	1358229
13222	8.9	1.9	2.1	chr15	79692069	79693352	(22297837)	C	HERVL-int	LTR/ERVL	(3930)	1347	2	1358226
6088	14.6	2.1	3.9	chr16	19278344	19279370	(71058975)	C	ERVL-int	LTR/ERVL	(4049)	1708	701	1433152
17	17.2	0.0	2.4	chr16	31073753	31073793	(59264552)	+	G-rich	Low_complexity	1	41	(0)	1459562
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
404	19.2	1.4	0.0	chr16	34062434	34062506	(56275839)	+	AluSz6	SINE/Alu	225	298	(14)	1463557
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
42532	7.3	1.5	0.4	chr16	84855696	84861284	(5477061)	C	HERVL-int	LTR/ERVL	(0)	5654	1	1533707
351	27.1	11.0	0.0	chr17	510520	510648	(82746793)	+	MIRb	SINE/MIR	61	205	(63)	1545286
11413	9.0	0.9	0.0	chr17	3425603	3427174	(79830267)	C	HERVL-int	LTR/ERVL	(3328)	2326	740	1551014
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
4476	2.8	0.0	0.0	chr17	32821864	32822401	(50435040)	+	L1PA5	LINE/L1	5482	6019	(135)	1597471
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
959	19.6	3.5	0.0	chr17	40455318	40455485	(42801956)	C	AluJb	SINE/Alu	(5)	307	134	1612084
2227	8.0	0.3	0.3	chr17	40455486	40455771	(42801670)	C	AluSq2	SINE/Alu	(16)	297	12	1612085
17399	8.2	0.8	0.7	chr17	54593233	54595533	(28661908)	C	HERVL-int	LTR/ERVL	(3351)	2303	1	1638282
15185	5.9	0.1	0.1	chr17	70821650	70823505	(12433936)	C	HERVL-int	LTR/ERVL	(3797)	1857	1	1667857
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
47120	5.9	0.5	0.0	chr18	2833273	2838897	(77534388)	C	HERVL-int	LTR/ERVL	(0)	5654	1	1693359
33280	8.9	1.8	0.3	chr18	11127866	11133402	(69239883)	+	HERVL-int	LTR/ERVL	1	5654	(0)	1705453
1846	15.2	1.1	1.8	chr18	26004699	26004980	(54368305)	+	AluJb	SINE/Alu	2	281	(31)	1720172
2680	20.1	5.7	1.6	chr18	26004994	26005544	(54367741)	+	MLT1A0-int	LTR/ERVL-MaLR	1160	1734	(1)	1720173
44246	7.3	1.8	0.1	chr18	35855492	35861049	(44512236)	+	HERVL-int	LTR/ERVL	1	5654	(0)	1733899
8708	12.0	11.4	0.8	chr18	36241153	36242553	(44130732)	C	THE1D-int	LTR/ERVL-MaLR	(60)	1571	3	1734529
407	16.4	0.0	0.0	chr18	36404581	36404647	(43968638)	C	MER5A1	DNA/hAT-Charlie	(58)	108	42	1734753
22035	7.1	0.7	0.3	chr18	37877261	37879995	(42493290)	+	HERVL-int	LTR/ERVL	1	2747	(2907)	1736636
8547	13.3	0.4	1.3	chr18	51003702	51004692	(29368593)	+	HERVL-int	LTR/ERVL	1014	1996	(3658)	1756192
28301	6.8	2.3	0.0	chr18	69973064	69976589	(10396696)	C	HERVL-int	LTR/ERVL	(0)	5654	2048	1783936
13521	7.2	3.0	0.3	chr18	69976588	69978308	(10394977)	C	HERVL-int	LTR/ERVL	(3779)	1875	106	1783936
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
11842	9.6	1.5	1.2	chr2	43284195	43285232	(198908297)	+	MSTA-int	LTR/ERVL-MaLR	597	1631	(0)	1977233
1971	12.9	15.2	3.7	chr2	43285233	43285567	(198907962)	+	MSTA	LTR/ERVL-MaLR	1	395	(33)	1977233
41305	8.4	2.0	2.5	chr2	56617563	56622026	(185571503)	+	HERVL-int	LTR/ERVL	1	4507	(1147)	1997618
33419	9.7	1.0	0.8	chr2	80179673	80181988	(162011541)	C	HERVL-int	LTR/ERVL	(3321)	2333	1	2033372
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
42228	6.7	1.3	0.2	chr2	104587936	104593528	(137600001)	C	HERVL-int	LTR/ERVL	(0)	5654	1	2063734
30041	8.3	1.6	0.3	chr2	125885405	125890976	(116302553)	C	HERVL-int	LTR/ERVL	(0)	5654	1	2095207
42715	8.3	1.0	1.0	chr2	154110796	154115310	(88078219)	C	HERVL-int	LTR/ERVL	(0)	5654	1124	2134514
25737	17.1	4.0	2.1	chr2	155923046	155927646	(86265883)	C	ERVL-int	LTR/ERVL	(1067)	4690	2	2136752
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
37437	8.2	0.6	0.8	chr2	164172211	164177131	(78016398)	C	HERVL-int	LTR/ERVL	(0)	5654	743	2147989
26871	14.3	1.7	0.6	chr2	168258541	168263450	(73930079)	+	ERVL-B4-int	LTR/ERVL	650	5654	(0)	2153298
12609	8.3	0.1	0.2	chr2	188802017	188803661	(53389868)	+	HERVL-int	LTR/ERVL	1	1644	(4010)	2182065
5423	6.9	2.1	1.0	chr2	188803662	188804376	(53389153)	+	HERVL-int	LTR/ERVL	4930	5652	(2)	2182065
35132	8.8	2.7	0.1	chr2	211135601	211140428	(31053101)	+	HERVL-int	LTR/ERVL	702	5654	(0)	2215205
31012	7.9	0.6	0.5	chr2	212440549	212446198	(29747331)	+	HERVL-int	LTR/ERVL	1	5654	(0)	2216965
29418	10.6	1.7	0.4	chr2	220538228	220543240	(21650289)	C	HERVL-int	LTR/ERVL	(556)	5111	1	2229690
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
510	33.0	12.3	0.9	chr20	62116065	62116293	(2327874)	+	MIR	SINE/MIR	4	262	(0)	2368168
2345	9.8	0.3	2.2	chr20	62116299	62116614	(2327553)	C	AluSz	SINE/Alu	(2)	310	1	2368169
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
1786	19.0	1.0	0.3	chr21	9113619	9113923	(37596060)	+	AluJb	SINE/Alu	1	307	(5)	2374250
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
21	16.7	0.0	2.4	chr21	9819273	9819314	(36890669)	+	(AC)n	Simple_repeat	1	42	(0)	2374898
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
5929	17.6	6.9	2.4	chr21	10361363	10362990	(36346993)	C	L1MA2	LINE/L1	(205)	6099	4327	2375401
2384	8.4	0.0	0.7	chr21	10362991	10363289	(36346694)	+	AluY	SINE/Alu	2	298	(13)	2375402
25	18.6	7.6	0.0	chr21	10405379	10405457	(36304526)	+	(CCCCAAT)n	Simple_repeat	1	85	(0)	2375496
15	18.4	4.7	0.0	chr21	10405422	10405464	(36304519)	+	(ATCCGCG)n	Simple_repeat	1	45	(0)	2375497
24109	9.4	1.6	1.2	chr21	28037098	28040436	(18669547)	C	HERVL-int	LTR/ERVL	(2303)	3351	1	2396215
16147	7.7	0.2	0.4	chr21	35432194	35434234	(11275749)	C	HERVL-int	LTR/ERVL	(3617)	2037	1	2408115
2130	11.9	1.3	0.0	chr21	37579027	37579320	(9130663)	C	AluSc	SINE/Alu	(10)	299	2	2411823
1274	28.2	4.6	5.9	chr21	37579321	37579542	(9130441)	C	L1MEf	LINE/L1	(5480)	1557	1119	2411822
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
20	22.7	0.0	3.3	chr21	44940122	44940181	(1769802)	+	(CCGGCC)n	Simple_repeat	1	60	(0)	2422350
15	23.4	0.0	0.0	chr22	10742206	10742245	(40076223)	+	(GGCTGG)n	Simple_repeat	1	40	(0)	2424573
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
530	23.4	6.1	1.9	chr22	11572555	11572711	(39245757)	+	MIRb	SINE/MIR	33	196	(72)	2425189
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
290	22.2	1.5	0.5	chr22	11932477	11932565	(38885903)	C	L1P4	LINE/L1	(1123)	5023	4933	2425553
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
248	12.9	3.9	2.6	chr22	18891846	18892362	(31926106)	+	(TATAATA)n	Simple_repeat	1	537	(0)	2431165
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
44232	5.5	0.7	0.8	chr22	45556296	45561682	(5256786)	C	HERVL-int	LTR/ERVL	(274)	5380	1	2484161
30161	7.4	0.5	1.1	chr3	440756	446435	(197849124)	C	HERVL-int	LTR/ERVL	(0)	5654	1	2493007
39156	7.0	1.2	0.5	chr3	1922104	1926923	(196368636)	+	HERVL-int	LTR/ERVL	468	5323	(331)	2495074
40399	6.7	1.6	0.5	chr3	3831852	3834492	(194461067)	C	HERVL-int	LTR/ERVL	(2987)	2667	1	2498095
41775	7.5	0.5	0.8	chr3	4127740	4133414	(194162145)	+	HERVL-int	LTR/ERVL	1	5654	(0)	2498532
4152	12.6	2.3	0.5	chr3	6553062	6553693	(191741866)	+	LTR9B	LTR/ERV1	1	644	(0)	2502421
1115	31.8	13.0	0.5	chr3	14177395	14178114	(184117445)	C	L2c	LINE/L2	(237)	3150	2330	2516417
21658	8.0	0.3	1.4	chr3	17590046	17590957	(180704602)	+	HERVL-int	LTR/ERVL	824	1729	(3925)	2522083
2395	9.7	1.0	0.0	chr3	17590958	17591265	(180704294)	+	AluY	SINE/Alu	1	311	(0)	2522084
907	27.6	9.4	4.9	chr3	42412373	42412879	(155882680)	+	MLT1H	LTR/ERVL-MaLR	18	549	(0)	2559055
36043	6.7	1.5	1.0	chr3	51131006	51132505	(147163054)	C	HERVL-int	LTR/ERVL	(3384)	2270	773	2573978
28281	6.1	0.6	0.1	chr3	55260823	55264254	(143031305)	+	HERVL-int	LTR/ERVL	1	3449	(2205)	2580175
40292	7.5	1.8	1.4	chr3	69977084	69979451	(128316108)	+	HERVL-int	LTR/ERVL	1	2406	(3248)	2605133
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
16541	7.9	0.2	0.2	chr3	77734376	77736629	(120558930)	C	HERVL-int	LTR/ERVL	(3400)	2254	1	2617237
40845	9.5	1.1	1.5	chr3	84466100	84471771	(113823788)	+	HERVL-int	LTR/ERVL	1	5646	(8)	2625786
11361	9.6	2.7	3.0	chr3	86446471	86447201	(111848358)	+	HERVL-int	LTR/ERVL	959	1650	(4004)	2628297
1384	32.9	3.4	1.3	chr3	86447230	86447783	(111847776)	+	ERVL-E-int	LTR/ERVL	4680	5245	(422)	2628295
33699	6.8	1.2	0.7	chr3	100238476	100242960	(98052599)	+	HERVL-int	LTR/ERVL	1145	5654	(0)	2641392
10245	21.6	4.6	0.9	chr3	103281908	103284079	(95011480)	C	HERVL-int	LTR/ERVL	(3457)	2257	1	2645598
9820	10.8	0.5	1.2	chr3	112692601	112694117	(85601442)	+	L1PB1	LINE/L1	252	1757	(5105)	2658181
9640	7.3	0.4	0.2	chr3	112694118	112695398	(85600161)	+	HERVL-int	LTR/ERVL	1396	2679	(2975)	2658182
399	27.7	3.2	0.8	chr3	123207615	123207734	(75087825)	+	MER5A	DNA/hAT-Charlie	67	189	(0)	2673343
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
21587	10.6	2.2	2.4	chr3	162635813	162638640	(35656919)	C	HERVL-int	LTR/ERVL	(2377)	3277	362	2732846
37736	6.5	0.8	0.3	chr3	179995304	180000000	(18295559)	+	HERVL-int	LTR/ERVL	1	4718	(936)	2757222
44360	6.3	0.4	0.3	chr3	193922960	193928350	(4367209)	+	HERVL-int	LTR/ERVL	260	5654	(0)	2780230
38802	6.0	0.3	1.0	chr4	3454349	3456213	(186758342)	+	HERVL-int	LTR/ERVL	1	1852	(3802)	2793185
42945	8.3	1.1	0.9	chr4	23464048	23469688	(166744867)	C	HERVL-int	LTR/ERVL	(0)	5654	1	2825596
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
7847	20.4	6.1	2.5	chr4	49268140	49270555	(140944000)	+	L1M4	LINE/L1	3095	5610	(570)	2865041
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
1130	13.8	0.3	0.1	chr4	49514156	49515857	(140698698)	+	ACRO1	Satellite/acro	1	1705	(0)	2865184
406	18.9	2.2	0.5	chr4	49573746	49573848	(140640707)	+	MSTA	LTR/ERVL-MaLR	4	113	(262)	2865274
271	21.9	1.9	0.4	chr4	49573937	49574021	(140640534)	+	THE1D-int	LTR/ERVL-MaLR	959	1064	(587)	2865275
839	22.6	15.8	2.1	chr4	49573984	49574223	(140640332)	C	THE1D-int	LTR/ERVL-MaLR	(398)	1233	955	2865276
8935	17.8	0.7	8.2	chr4	52662138	52663923	(137550632)	+	MSTA-int	LTR/ERVL-MaLR	1	1651	(0)	2866518
38434	11.0	2.0	2.0	chr4	62418498	62424151	(127790404)	C	HERVL-int	LTR/ERVL	(0)	5654	1	2880772
42255	9.0	0.8	0.6	chr4	64672449	64678088	(125536467)	C	HERVL-int	LTR/ERVL	(0)	5654	1	2883435
31503	10.4	0.9	0.8	chr4	66087618	66092217	(124122338)	C	HERVL-int	LTR/ERVL	(936)	4718	1	2885196
10459	12.9	0.9	0.6	chr4	76462961	76464587	(113749968)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	2899289
43317	7.4	0.6	0.1	chr4	80174938	80180341	(110034214)	C	HERVL-int	LTR/ERVL	(2)	5652	223	2904496
25740	21.9	3.2	2.0	chr4	80793684	80799041	(109415514)	C	ERVL-E-int	LTR/ERVL	(241)	5426	5	2905253
41957	7.6	1.6	0.1	chr4	96925105	96930538	(93284017)	+	HERVL-int	LTR/ERVL	139	5654	(0)	2928295
35448	7.3	1.4	0.2	chr4	97380142	97384715	(92829840)	+	HERVL-int	LTR/ERVL	2	4630	(1024)	2928846
7338	9.5	2.3	0.2	chr4	115458253	115459245	(74755310)	C	HERVL-int	LTR/ERVL	(3693)	1961	948	2953273
12151	7.7	0.2	0.8	chr4	124471513	124473096	(65741459)	+	HERVL-int	LTR/ERVL	1	1575	(4079)	2965318
23759	7.6	0.4	0.3	chr4	124473094	124476102	(65738453)	+	HERVL-int	LTR/ERVL	1788	4797	(857)	2965318
42150	8.7	1.2	0.7	chr4	132351457	132357078	(57857477)	C	HERVL-int	LTR/ERVL	(0)	5654	1	2975770
40048	9.1	1.0	1.2	chr4	135036393	135039543	(55175012)	+	HERVL-int	LTR/ERVL	186	3313	(2341)	2978802
10880	9.0	3.0	0.0	chr4	135404390	135405859	(54808696)	+	HERVL-int	LTR/ERVL	1	1515	(4139)	2979251
1987	17.4	10.8	2.6	chr4	135405860	135406324	(54808231)	+	LTR22B1	LTR/ERVK	1	508	(18)	2979252
39920	9.0	1.0	2.4	chr4	160113394	160119014	(30095541)	+	HERVL-int	LTR/ERVL	110	5654	(0)	3013746
39451	8.3	1.1	0.7	chr4	160271051	160276262	(29938293)	+	HERVL-int	LTR/ERVL	1	5234	(420)	3013902
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
4747	18.1	7.3	9.6	chr4	190119764	190122447	(92108)	+	TAR1	Satellite/telo	1	2622	(566)	3054643
543	5.4	1.2	0.9	chr4	190122449	190123118	(91437)	+	(AGGGTT)n	Simple_repeat	1	678	(0)	3054644
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
39891	8.3	0.9	0.0	chr5	18746584	18751737	(162786522)	+	HERVL-int	LTR/ERVL	2	5198	(456)	3078462
42147	9.3	0.6	0.2	chr5	27514542	27520169	(154018090)	C	HERVL-int	LTR/ERVL	(0)	5654	4	3090013
40798	9.8	1.2	0.3	chr5	27630581	27636118	(153902141)	C	HERVL-int	LTR/ERVL	(66)	5588	2	3090146
45208	6.4	1.7	0.3	chr5	32287596	32293169	(149245090)	+	HERVL-int	LTR/ERVL	1	5654	(0)	3096553
2391	10.8	0.3	0.0	chr5	37269764	37270060	(144268199)	C	AluSx1	SINE/Alu	(2)	310	13	3104126
45631	6.3	0.6	1.2	chr5	37270061	37271528	(144266731)	C	HERVL-int	LTR/ERVL	(4191)	1463	1	3104123
33293	7.2	0.8	0.9	chr5	37795417	37798236	(143740023)	+	HERVL-int	LTR/ERVL	1386	4200	(1454)	3105045
35749	7.8	0.9	0.3	chr5	41994051	41998672	(139539587)	C	HERVL-int	LTR/ERVL	(0)	5654	1005	3111097
33795	6.8	0.5	0.3	chr5	61908556	61913030	(119625229)	C	HERVL-int	LTR/ERVL	(0)	5654	1171	3132956
18586	9.4	2.2	2.9	chr5	61913033	61915895	(119622364)	+	MER61-int	LTR/ERV1	2376	5217	(0)	3132958
44849	7.0	1.0	0.4	chr5	62102783	62108274	(119429985)	+	HERVL-int	LTR/ERVL	128	5654	(0)	3133200
19290	18.0	7.9	6.7	chr5	74786316	74788423	(106749836)	+	HERVL-int	LTR/ERVL	4	2156	(3498)	3152507
42310	8.2	0.8	1.5	chr5	85245147	85250836	(96287423)	C	HERVL-int	LTR/ERVL	(0)	5654	1	3168301
25008	7.4	0.6	0.4	chr5	89630173	89636079	(91902180)	C	L1PA5	LINE/L1	(246)	6081	177	3173813
1401	12.6	0.4	1.7	chr5	89636294	89636527	(91901732)	C	L1P4	LINE/L1	(1321)	4825	4595	3173814
43730	7.4	0.7	0.2	chr5	92215634	92221263	(89316996)	+	HERVL-int	LTR/ERVL	1	5654	(0)	3177232
42812	7.5	1.6	0.6	chr5	106913551	106918989	(74619270)	C	HERVL-int	LTR/ERVL	(142)	5512	1	3195708
41952	6.8	1.5	0.3	chr5	115725516	115730967	(65807292)	C	HERVL-int	LTR/ERVL	(142)	5512	1	3207205
1414	21.6	16.6	4.0	chr5	117815171	117815422	(63722837)	+	Charlie1	DNA/hAT-Charlie	2433	2569	(212)	3210089
14	0.0	0.0	0.0	chr5	117815456	117815473	(63722786)	+	(TTA)n	Simple_repeat	1	18	(0)	3210091
1541	15.8	4.0	4.7	chr5	117815474	117815752	(63722507)	C	AluJo	SINE/Alu	(25)	287	11	3210092
43088	7.4	1.2	1.5	chr5	140910078	140911890	(40626369)	C	HERVL-int	LTR/ERVL	(0)	1831	1	3243358
1516	18.5	15.6	6.1	chr5	144743074	144743401	(36794858)	+	L1PA15-16	LINE/L1	1	375	(6478)	3249689
2991	1.6	0.0	0.0	chr5	144743402	144743719	(36794540)	C	AluYb8	SINE/Alu	(0)	318	1	3249690
36141	8.0	2.1	0.2	chr5	150872210	150877163	(30661096)	+	HERVL-int	LTR/ERVL	606	5654	(0)	3260807
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
32683	5.8	1.6	0.3	chr6	8403957	8407927	(162398052)	C	HERVL-int	LTR/ERVL	(0)	5654	1515	3326684
11907	6.2	0.5	0.3	chr6	8407912	8409396	(162396583)	C	HERVL-int	LTR/ERVL	(4166)	1488	1	3326686
38896	7.3	0.8	0.1	chr6	19401579	19406518	(151399461)	C	HERVL-int	LTR/ERVL	(682)	4972	1	3344382
8491	9.2	1.9	0.1	chr6	68354495	68355649	(102450330)	C	HERVL-int	LTR/ERVL	(3338)	2316	1140	3416574
5063	14.1	2.1	1.6	chr6	68355668	68356593	(102449386)	C	L1PA15-16	LINE/L1	(3048)	3801	2871	3416575
14912	8.8	0.1	0.2	chr6	77595068	77597043	(93208936)	C	HERVL-int	LTR/ERVL	(3680)	1974	1	3429004
527	9.7	24.9	8.2	chr6	79869459	79869616	(90936363)	+	MER53	DNA/hAT	1	193	(0)	3431885
41434	7.2	1.6	0.3	chr6	83010975	83016556	(87789423)	C	HERVL-int	LTR/ERVL	(0)	5654	1	3435931
37846	10.4	2.4	1.9	chr6	98167058	98171984	(72633995)	+	HERVL-int	LTR/ERVL	1	4947	(707)	3455912
29796	7.6	1.3	0.1	chr6	104079673	104083498	(66722481)	+	HERVL-int	LTR/ERVL	1	3870	(1784)	3463535
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
2145	8.8	3.5	0.7	chr6	121635882	121636191	(49169788)	+	MLT2A1	LTR/ERVL	1	319	(125)	3489355
196	26.7	7.9	3.7	chr6	121636198	121636306	(49169673)	+	LFSINE_Vert	SINE/tRNA	10	123	(336)	3489356
11693	7.0	0.8	2.0	chr6	121636307	121637022	(49168957)	C	HERVL-int	LTR/ERVL	(4101)	1553	853	3489357
44962	6.6	0.6	0.8	chr6	122594505	122599931	(48206048)	C	HERVL-int	LTR/ERVL	(236)	5418	1	3490603
4966	7.2	0.3	0.0	chr6	123794052	123794680	(47011299)	+	HERVL-int	LTR/ERVL	1	631	(5023)	3492182
34471	7.8	1.5	0.1	chr6	123794687	123798699	(47007280)	+	HERVL-int	LTR/ERVL	1154	5230	(424)	3492182
29689	7.2	0.8	0.3	chr6	133558921	133561510	(37244469)	C	HERVL-int	LTR/ERVL	(3040)	2614	2	3505383
12720	7.2	0.7	0.3	chr6	133654072	133655802	(37150177)	+	HERVL-int	LTR/ERVL	25	1762	(3892)	3505520
2921	20.4	9.3	7.4	chr6	138858437	138858697	(31947282)	C	L1ME1	LINE/L1	(1)	6178	5943	3513687
1687	16.4	3.2	0.7	chr6	138858698	138858999	(31946980)	C	AluJb	SINE/Alu	(0)	312	1	3513688
2921	20.4	9.3	7.4	chr6	138859000	138859029	(31946950)	C	L1ME1	LINE/L1	(237)	5942	5937	3513687
722	14.4	0.0	0.0	chr6	138859030	138859133	(31946846)	C	U6	snRNA	(3)	104	1	3513689
2921	20.8	9.6	7.0	chr6	138859134	138859807	(31946172)	C	L1ME1	LINE/L1	(243)	5936	5167	3513687
26205	7.6	0.5	0.1	chr6	140646959	140650333	(30155646)	+	HERVL-int	LTR/ERVL	832	4220	(1434)	3516305
42034	7.7	1.8	1.6	chr6	140692782	140696014	(30109965)	C	HERVL-int	LTR/ERVL	(0)	3279	1	3516363
15648	7.4	2.0	2.7	chr6	141654494	141656654	(29149325)	+	HERVL-int	LTR/ERVL	201	2344	(3310)	3517529
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
1981	16.6	0.0	1.0	chr6	143874823	143875135	(26930844)	C	AluSz	SINE/Alu	(2)	310	1	3520539
34384	7.1	1.0	1.7	chr6	143875136	143876571	(26929408)	C	HERVL-int	LTR/ERVL	(4191)	1463	7	3520537
43800	6.8	1.6	1.3	chr6	145573799	145575892	(25230087)	C	HERVL-int	LTR/ERVL	(0)	2124	1	3522941
632	28.1	1.8	0.6	chr6	156989527	156989694	(13816285)	+	MIRb	SINE/MIR	29	198	(70)	3540276
29042	8.0	1.1	0.2	chr6	159367659	159371341	(11434638)	C	HERVL-int	LTR/ERVL	(1938)	3716	1	3543985
24890	8.6	0.4	0.1	chr6	160501907	160505098	(10300881)	C	HERVL-int	LTR/ERVL	(2453)	3201	1	3545496
16790	7.3	0.9	0.4	chr6	165194799	165196960	(5609019)	+	HERVL-int	LTR/ERVL	1	2172	(3482)	3551669
332	28.3	12.2	3.2	chr6	170450086	170450271	(355708)	+	MIRb	SINE/MIR	44	248	(20)	3557442
7054	7.7	0.5	0.9	chr7	9816514	9817435	(149528538)	C	HERVL-int	LTR/ERVL	(0)	5654	4736	3574191
11429	9.5	0.4	0.6	chr7	9817430	9819013	(149526960)	C	HERVL-int	LTR/ERVL	(4042)	1612	31	3574191
21201	6.3	3.0	2.1	chr7	26997074	26998333	(132347640)	+	HERVL-int	LTR/ERVL	1	1294	(4360)	3597852
186	26.0	3.8	2.0	chr7	26998334	26998384	(132347589)	+	MamRTE1	LINE/RTE-BovB	404	455	(3357)	3597853
21201	6.3	3.0	2.1	chr7	26998385	27000000	(132345973)	+	HERVL-int	LTR/ERVL	1295	2955	(2699)	3597852
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
775	16.9	10.9	9.0	chr7	65952228	65952416	(93393557)	C	MER58A	DNA/hAT-Charlie	(2)	222	30	3648863
42206	9.2	0.6	0.6	chr7	86088190	86093848	(73252125)	+	HERVL-int	LTR/ERVL	1	5654	(0)	3685557
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
42308	7.0	0.7	0.7	chr7	107732828	107736660	(51609313)	+	HERVL-int	LTR/ERVL	1	3835	(1819)	3719534
31690	8.6	1.2	1.7	chr7	109790771	109794981	(49550992)	C	HERVL-int	LTR/ERVL	(0)	5654	1360	3722227
25864	5.4	0.1	0.1	chr7	109794984	109801140	(49544833)	+	L1PA4	LINE/L1	1	6155	(0)	3722229
41014	8.3	0.9	0.3	chr7	122203020	122208641	(37137332)	C	HERVL-int	LTR/ERVL	(0)	5654	1	3738785
15923	10.3	1.5	0.1	chr7	125940888	125943076	(33402897)	C	HERVL-int	LTR/ERVL	(2966)	2688	468	3743795
45728	6.1	1.4	0.3	chr7	129444646	129450234	(29895739)	C	HERVL-int	LTR/ERVL	(0)	5654	1	3749160
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
20923	6.9	1.1	2.1	chr8	52568419	52571121	(92567515)	C	HERVL-int	LTR/ERVL	(2981)	2673	1	3868328
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
43402	7.9	1.0	0.1	chr8	64121661	64127254	(81011382)	C	HERVL-int	LTR/ERVL	(0)	5654	11	3884079
35788	7.9	0.5	0.1	chr8	90410387	90414959	(54723677)	C	HERVL-int	LTR/ERVL	(271)	5383	791	3921129
36920	7.8	1.5	0.5	chr8	92765117	92769888	(52368748)	C	HERVL-int	LTR/ERVL	(273)	5381	563	3924268
44555	6.7	0.9	0.8	chr8	94300899	94303106	(50835530)	C	HERVL-int	LTR/ERVL	(3464)	2190	1	3926617
32091	7.7	0.5	5.3	chr8	109939037	109943518	(35195118)	C	HERVL-int	LTR/ERVL	(0)	5654	1389	3951519
7518	8.1	1.7	0.7	chr8	109943519	109944508	(35194128)	C	HERVL-int	LTR/ERVL	(4630)	1024	25	3951519
37042	8.2	1.1	1.1	chr8	113936150	113941120	(31197516)	C	HERVL-int	LTR/ERVL	(684)	4970	1	3956745
23448	11.5	2.4	1.2	chr8	116145440	116150921	(28987715)	C	HERVL-int	LTR/ERVL	(4)	5650	1	3959610
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
13668	6.8	1.5	0.6	chr9	5738653	5740418	(132654299)	C	HERVL-int	LTR/ERVL	(3872)	1782	1	4016957
2181	12.5	0.7	0.0	chr9	6974361	6974657	(131420060)	C	AluSx	SINE/Alu	(13)	299	1	4019069
25853	7.5	0.4	1.7	chr9	21847327	21850874	(116543843)	+	HERVL-int	LTR/ERVL	1	3502	(2152)	4039782
42755	8.2	1.1	0.4	chr9	26105098	26110710	(112284007)	+	HERVL-int	LTR/ERVL	1	5654	(0)	4045192
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
2707	27.2	7.3	5.5	chr9	61855698	61856977	(76537740)	+	SST1	Satellite/centr	263	1561	(2)	4072475
15	5.6	0.0	0.0	chr9	61856982	61857000	(76537717)	+	(TG)n	Simple_repeat	1	19	(0)	4072477
23	25.6	1.7	0.0	chr9	61857000	61857059	(76537658)	+	(TC)n	Simple_repeat	1	61	(0)	4072478
1951	29.4	5.2	6.5	chr9	61857061	61858378	(76536339)	+	SST1	Satellite/centr	262	1562	(1)	4072479
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
16646	6.8	0.6	0.7	chr9	93973235	93974319	(44420398)	+	HERVL-int	LTR/ERVL	1091	2177	(3477)	4118840
2357	15.8	2.7	1.5	chr9	97301235	97301632	(41093085)	C	ERVL-B4-int	LTR/ERVL	(3717)	1997	1595	4124320
552	24.0	0.0	0.0	chr9	97301633	97301736	(41092981)	C	MLT2B2	LTR/ERVL	(106)	456	353	4124322
8225	18.2	4.1	2.2	chr9	97301740	97303303	(41091414)	C	ERVL-B4-int	LTR/ERVL	(4119)	1595	1	4124320
786	28.7	6.8	3.1	chrX	39610039	39610362	(116430533)	C	MER102b	DNA/hAT-Charlie	(0)	341	5	4420836
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
41512	9.8	0.9	0.2	chrX	92727826	92733436	(63307459)	+	HERVL-int	LTR/ERVL	2	5654	(0)	4484853
41961	9.5	0.6	0.3	chrX	93957818	93963456	(62077439)	+	HERVL-int	LTR/ERVL	1	5654	(0)	4486292
44358	6.7	0.9	0.2	chrX	108477842	108483159	(47557736)	C	HERVL-int	LTR/ERVL	(296)	5358	1	4505880
16330	7.3	0.3	0.4	chrX	108816786	108818872	(47222023)	C	HERVL-int	LTR/ERVL	(3311)	2343	259	4506247
1015	26.4	6.2	5.0	chrX	115928085	115928542	(40112353)	+	MER101-int	LTR/ERV1	2280	2743	(3896)	4516144
1429	18.2	0.7	5.7	chrX	115928562	115928857	(40112038)	+	AluJo	SINE/Alu	2	282	(30)	4516146
18361	16.5	4.7	3.3	chrX	115928904	115930912	(40109983)	C	L1MA1	LINE/L1	(0)	7721	5630	4516147
5230	11.2	1.1	4.0	chrX	121196867	121197278	(34843617)	+	LTR25	LTR/ERV1	1	396	(448)	4524118
2385	9.7	0.0	1.0	chrX	121197279	121197588	(34843307)	+	AluSx4	SINE/Alu	1	307	(3)	4524119
15373	20.0	1.8	5.5	chrX	121975079	121978279	(34062616)	+	HERVL-int	LTR/ERVL	2	3081	(2676)	4525026
23449	9.2	0.5	0.2	chrX	122609557	122612969	(33427926)	+	HERVL-int	LTR/ERVL	1	3423	(2231)	4525627
28106	8.5	0.4	0.4	chrX	126035909	126039604	(30001291)	+	HERVL-int	LTR/ERVL	1	3696	(1958)	4530721
3128	4.3	0.0	0.0	chrX	139397800	139398175	(16642720)	+	L1PA5	LINE/L1	5779	6154	(0)	4550645
42903	6.0	1.4	0.4	chrX	139398176	139402644	(16638251)	+	HERVL-int	LTR/ERVL	1184	5654	(0)	4550644
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638