528	6.5	1.3	4.5	chr1	180089	180998	(248775424)	+	(ACCCTA)n	Simple_repeat	1	922	(0)	268
3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
1880	12.2	6.7	0.0	chr1	1881421	1881699	(247074723)	C	AluSz	SINE/Alu	(13)	299	1	2548
17	29.0	1.0	6.1	chr1	1891399	1891496	(247064926)	+	G-rich	Low_complexity	1	99	(0)	2572
14	11.7	8.1	0.0	chr1	2342635	2342671	(246613751)	+	(CCTCA)n	Simple_repeat	1	40	(0)	3126
555	17.7	1.6	4.6	chr1	2342810	2342823	(246613599)	C	AluSx	SINE/Alu	(171)	131	119	3127
91	0.0	1.1	2.1	chr1	2342824	2342916	(246613506)	+	(TATTT)n	Simple_repeat	1	94	(0)	3128
30	0.0	0.0	0.0	chr1	8817827	8817854	(240138568)	+	(T)n	Simple_repeat	1	28	(0)	12308
12	31.0	0.0	1.9	chr1	8818008	8818060	(240138362)	+	(CCGCCCC)n	Simple_repeat	1	53	(0)	12309
16	11.5	0.0	8.9	chr1	9689762	9689806	(239266616)	+	(GCCCC)n	Simple_repeat	1	45	(0)	14182
30	3.1	0.0	0.0	chr1	11648973	11649005	(237307417)	+	(CAGCC)n	Simple_repeat	1	33	(0)	18152
2515	5.6	0.0	3.4	chr1	11909187	11909506	(237046916)	+	AluSx	SINE/Alu	1	309	(3)	18709
52	0.0	0.0	0.0	chr1	11909549	11909596	(237046826)	+	(GCCCCGCCGT)n	Simple_repeat	1	48	(0)	18710
291	28.9	3.8	0.0	chr1	12179051	12179126	(236777296)	+	L2c	LINE/L2	3274	3352	(35)	19325
546	28.9	13.6	8.3	chr1	15340280	15340713	(233615709)	C	MLT1H	LTR/ERVL-MaLR	(13)	536	11	25044
1037	20.8	4.8	0.0	chr1	16643865	16644061	(232312361)	C	MER3	DNA/hAT-Charlie	(0)	209	3	27883
990	27.4	9.6	3.1	chr1	17503066	17503446	(231452976)	+	MLT1H	LTR/ERVL-MaLR	140	547	(2)	29573
290	30.9	2.0	2.0	chr1	17985443	17985541	(230970881)	+	MLT1H2	LTR/ERVL-MaLR	88	186	(303)	30682
198	26.7	6.2	0.0	chr1	17985856	17985915	(230970507)	+	MIR3	SINE/MIR	29	92	(116)	30683
51	0.0	0.0	0.0	chr1	19000001	19000046	(229956376)	+	(GAA)n	Simple_repeat	1	46	(0)	32890
48	14.5	3.2	0.0	chr1	19000047	19000139	(229956283)	+	GA-rich	Low_complexity	1	96	(0)	32891
3280	23.9	9.9	3.2	chr1	19000230	19000973	(229955449)	+	L1MEc	LINE/L1	674	1423	(4977)	32892
32	20.1	6.7	2.4	chr1	19485680	19485798	(229470624)	+	(GCGGC)n	Simple_repeat	1	127	(0)	33725
21	19.6	0.0	0.0	chr1	19485986	19486032	(229470390)	+	(GCCCA)n	Simple_repeat	1	47	(0)	33726
357	20.5	6.4	7.1	chr1	19486152	19486295	(229470127)	C	L2a	LINE/L2	(19)	3407	3245	33727
2180	12.2	5.8	2.6	chr1	20285529	20285880	(228670542)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	35444
987	29.7	12.1	6.5	chr1	20285885	20286389	(228670033)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	13	35445
21	21.1	0.0	3.5	chr1	20633486	20633543	(228322879)	+	(CGG)n	Simple_repeat	1	58	(0)	36239
12	21.0	0.0	7.8	chr1	20633687	20633737	(228322685)	+	(GGCTCG)n	Simple_repeat	1	51	(0)	36240
1803	16.8	1.4	0.7	chr1	22055491	22055782	(226900640)	C	AluJb	SINE/Alu	(13)	299	6	39323
17	0.0	0.0	0.0	chr1	22055868	22055886	(226900536)	+	(T)n	Simple_repeat	1	19	(0)	39324
11	21.7	0.0	2.9	chr1	23980380	23980414	(224976008)	+	(CTCCAC)n	Simple_repeat	1	35	(0)	43830
23	16.5	3.7	0.0	chr1	24502737	24502790	(224453632)	+	(CCCCCG)n	Simple_repeat	1	56	(0)	45043
26	0.0	0.0	0.0	chr1	24503164	24503188	(224453234)	+	(GCGGG)n	Simple_repeat	1	25	(0)	45044
22	0.0	0.0	0.0	chr1	24503214	24503237	(224453185)	+	(A)n	Simple_repeat	1	24	(0)	45045
62	6.8	0.0	0.0	chr1	27296751	27296828	(221659594)	+	(CCCAGC)n	Simple_repeat	1	78	(0)	51460
404	31.7	8.4	0.6	chr1	27519064	27519228	(221437194)	C	L2	LINE/L2	(512)	2907	2729	51947
16	17.4	0.0	0.0	chr1	27773082	27773115	(221183307)	+	(CAGCCC)n	Simple_repeat	1	34	(0)	52509
675	17.1	3.0	0.0	chr1	27934659	27934787	(221021635)	+	L1MC5a	LINE/L1	9169	9301	(3)	52886
230	35.1	0.0	2.5	chr1	27934791	27934869	(221021553)	+	L2c	LINE/L2	3123	3199	(176)	52885
869	27.5	12.4	2.1	chr1	28803652	28803961	(220152461)	C	MLT1L	LTR/ERVL-MaLR	(84)	526	185	55181
1837	20.0	11.3	5.0	chr1	28803990	28804485	(220151937)	C	MLT1H	LTR/ERVL-MaLR	(18)	531	1	55183
21	3.6	0.0	0.0	chr1	29517904	29517932	(219438490)	+	(CTGGG)n	Simple_repeat	1	29	(0)	56768
378	23.0	7.5	8.0	chr1	29518009	29518183	(219438239)	+	MER113A	DNA/hAT-Charlie	9	182	(132)	56769
478	24.3	4.4	3.9	chr1	29586985	29587164	(219369258)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	369	56905
2005	23.8	3.7	2.9	chr1	29587308	29587869	(219368553)	+	MER74B	LTR/ERVL	56	622	(0)	56906
257	31.8	0.9	6.0	chr1	30122146	30122262	(218834160)	C	MIR	SINE/MIR	(3)	259	149	57887
386	28.6	12.7	1.0	chr1	30122470	30122677	(218833745)	C	MLT1H	LTR/ERVL-MaLR	(255)	294	59	57888
17	20.8	5.2	1.6	chr1	31617465	31617522	(217338900)	+	(TGGA)n	Simple_repeat	1	61	(0)	61030
12	23.6	2.0	4.0	chr1	31617621	31617669	(217338753)	+	(CCCG)n	Simple_repeat	1	50	(0)	61031
199	31.9	8.4	4.1	chr1	31712362	31712508	(217243914)	+	L2c	LINE/L2	3233	3386	(1)	61194
668	25.7	7.2	2.1	chr1	31712840	31713085	(217243337)	+	MIR	SINE/MIR	18	268	(0)	61195
29	7.9	0.0	0.0	chr1	31938062	31938102	(217018320)	+	(CGG)n	Simple_repeat	1	41	(0)	61649
13	20.9	4.3	2.1	chr1	31938121	31938144	(217018278)	+	(CGGCG)n	Simple_repeat	1	46	(0)	61650
16	0.0	0.0	0.0	chr1	31938145	31938164	(217018258)	+	(CGG)n	Simple_repeat	1	20	(0)	61651
35	29.8	3.9	3.8	chr1	31938185	31938388	(217018034)	+	(GCC)n	Simple_repeat	1	212	(0)	61652
15	14.7	0.0	0.0	chr1	31938446	31938475	(217017947)	+	(GCTG)n	Simple_repeat	1	30	(0)	61653
2293	10.4	1.0	0.0	chr1	32015899	32016207	(216940215)	+	AluSq2	SINE/Alu	1	312	(1)	61875
221	27.2	10.6	11.8	chr1	32062317	32062398	(216894024)	+	MIRb	SINE/MIR	167	248	(20)	61970
37	2.8	0.0	0.0	chr1	34165583	34165618	(214790804)	+	(CA)n	Simple_repeat	1	36	(0)	66329
18	20.9	0.0	0.0	chr1	34165622	34165665	(214790757)	+	(ACACAC)n	Simple_repeat	1	44	(0)	66330
16	29.6	0.0	0.0	chr1	34165883	34165927	(214790495)	+	GA-rich	Low_complexity	1	45	(0)	66331
410	26.3	15.2	9.0	chr1	34415253	34415553	(214540869)	+	MLT1H	LTR/ERVL-MaLR	211	533	(16)	66758
1204	27.9	7.4	1.7	chr1	34829233	34829637	(214126785)	+	MLT1H	LTR/ERVL-MaLR	13	442	(107)	67487
301	28.5	17.3	1.2	chr1	34829760	34829919	(214126503)	C	L3	LINE/CR1	(107)	3992	3802	67488
306	31.9	0.1	1.3	chr1	36595075	36595185	(212361237)	C	MIR1_Amn	SINE/MIR	(110)	120	11	71205
25	14.5	0.0	0.0	chr1	36595272	36595317	(212361105)	+	(GGGCT)n	Simple_repeat	1	46	(0)	71208
420	29.1	3.2	13.2	chr1	37096604	37096920	(211859502)	+	MLT1H	LTR/ERVL-MaLR	81	364	(185)	72101
181	26.7	5.4	2.8	chr1	37097099	37097206	(211859216)	C	L2b	LINE/L2	(1208)	2211	2101	72100
795	23.1	10.1	5.7	chr1	37100393	37100693	(211855729)	+	MLT1H	LTR/ERVL-MaLR	3	354	(195)	72107
543	22.7	24.5	0.0	chr1	37100799	37101064	(211855358)	C	MER2	DNA/TcMar-Tigger	(6)	339	1	72108
2466	12.3	1.6	1.1	chr1	37159844	37160222	(211796200)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	72232
31	7.6	0.0	0.0	chr1	37713459	37713500	(211242922)	+	(TAA)n	Simple_repeat	1	42	(0)	73289
180	4.3	0.0	0.0	chr1	37713522	37713544	(211242878)	C	MIRb	SINE/MIR	(31)	237	215	73290
375	29.3	10.1	4.8	chr1	37713591	37713862	(211242560)	+	LTR79	LTR/ERVL	57	344	(183)	73291
436	28.4	17.8	2.3	chr1	38250433	38250836	(210705586)	C	MLT1H	LTR/ERVL-MaLR	(25)	524	1	74355
2096	22.3	4.1	1.8	chr1	38344766	38345268	(210611154)	C	LTR40a	LTR/ERVL	(0)	519	5	74530
252	30.3	3.6	9.6	chr1	38345387	38345404	(210611018)	+	L2c	LINE/L2	3251	3267	(120)	74528
1302	19.9	22.9	3.4	chr1	38345405	38345842	(210610580)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	74531
252	30.3	3.6	9.6	chr1	38345843	38345969	(210610453)	+	L2c	LINE/L2	3268	3387	(0)	74528
503	30.0	9.7	0.8	chr1	38350976	38351237	(210605185)	+	L2a	LINE/L2	2913	3200	(226)	74545
940	27.3	9.0	4.4	chr1	38351238	38351732	(210604690)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	50	74540
713	24.2	9.3	7.4	chr1	38640325	38640786	(210315636)	+	MLT1H	LTR/ERVL-MaLR	1	517	(32)	75063
2849	15.4	5.1	0.4	chr1	38640787	38641236	(210315186)	+	MLT2B2	LTR/ERVL	2	476	(39)	75064
20	27.3	0.0	1.6	chr1	38859494	38859557	(210096865)	+	(GCCTCC)n	Simple_repeat	1	64	(0)	75454
17	28.2	2.6	2.6	chr1	38859558	38859569	(210096853)	+	(GCC)n	Simple_repeat	1	78	(0)	75455
32	22.4	2.3	6.1	chr1	38859656	38859677	(210096745)	+	(GCC)n	Simple_repeat	1	27	(104)	75456
16	8.3	0.0	0.0	chr1	38859678	38859703	(210096719)	+	(CAGGC)n	Simple_repeat	1	26	(0)	75457
32	22.4	2.3	6.1	chr1	38859704	38859783	(210096639)	+	(GCC)n	Simple_repeat	28	131	(0)	75456
445	29.7	10.2	6.0	chr1	40372939	40373239	(208583183)	+	LTR85c	LTR/Gypsy?	356	670	(153)	78692
503	17.4	0.0	1.0	chr1	40373376	40373474	(208582948)	+	MIR	SINE/MIR	164	261	(1)	78693
12	24.3	0.0	8.1	chr1	40373475	40373536	(208582886)	+	(CTTC)n	Simple_repeat	1	62	(0)	78694
187	26.1	2.1	0.0	chr1	40864131	40864176	(208092246)	+	MIR3	SINE/MIR	44	90	(118)	79665
322	32.6	2.8	7.0	chr1	40864177	40864361	(208092061)	+	MIRc	SINE/MIR	69	245	(23)	79666
27	17.8	4.0	5.8	chr1	41242139	41242240	(207714182)	+	(GCGG)n	Simple_repeat	1	100	(0)	80410
226	38.5	5.7	1.1	chr1	41956728	41956911	(206999511)	C	Tigger19b	DNA/TcMar-Tigger	(92)	458	266	81729
32	8.7	0.0	0.0	chr1	43367820	43367868	(205588554)	+	(CTGGGCAGGG)n	Simple_repeat	1	49	(0)	84223
12	11.5	3.3	3.2	chr1	44417620	44417649	(204538773)	+	(CCTC)n	Simple_repeat	1	31	(0)	85980
16	16.3	0.0	2.8	chr1	47438097	47438132	(201518290)	+	(GCG)n	Simple_repeat	1	36	(0)	91599
443	33.2	8.6	3.5	chr1	47802695	47803202	(201153220)	+	L2c	LINE/L2	2675	3207	(180)	92330
695	21.3	17.6	11.9	chr1	47803207	47803584	(201152838)	+	MLT1H	LTR/ERVL-MaLR	2	405	(144)	92331
450	27.4	0.9	0.0	chr1	47803664	47803769	(201152653)	+	L2c	LINE/L2	3242	3348	(39)	92330
214	34.3	5.9	4.8	chr1	47970269	47970519	(200985903)	+	L2a	LINE/L2	2723	2976	(443)	92653
494	26.0	7.0	0.7	chr1	47970567	47970713	(200985709)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	393	92654
322	27.5	7.4	3.2	chr1	47970726	47970950	(200985472)	C	MLT1H	LTR/ERVL-MaLR	(101)	310	68	92654
366	29.3	7.2	1.1	chr1	48620018	48620200	(200336222)	+	MamRep605	LTR?	36	230	(619)	93657
12	10.7	2.9	5.7	chr1	50048045	50048078	(198908344)	+	(GCGAGA)n	Simple_repeat	1	35	(0)	96036
21	17.6	2.2	0.0	chr1	52842392	52842419	(196114003)	+	(AT)n	Simple_repeat	1	29	(0)	101890
48	0.0	0.0	0.0	chr1	52842420	52842460	(196113962)	+	(TG)n	Simple_repeat	1	41	(0)	101891
21	17.6	2.2	0.0	chr1	52842461	52842477	(196113945)	+	(AT)n	Simple_repeat	2	18	(0)	101892
18	2.8	10.5	2.4	chr1	53327915	53327968	(195628454)	+	(GCC)n	Simple_repeat	1	58	(0)	102875
27	8.2	0.0	0.0	chr1	53328007	53328045	(195628377)	+	(GCC)n	Simple_repeat	1	39	(0)	102875
17	20.5	1.6	6.2	chr1	53328160	53328222	(195628200)	+	(CCT)n	Simple_repeat	1	64	(0)	102876
223	30.2	8.5	1.1	chr1	54005019	54005105	(194951317)	+	MIR1_Amn	SINE/MIR	52	145	(85)	104208
1465	5.2	1.1	0.0	chr1	54005410	54005582	(194950840)	C	AluYh3	SINE/Alu	(5)	306	132	104209
16	0.0	0.0	0.0	chr1	54489318	54489334	(194467088)	+	(A)n	Simple_repeat	1	17	(0)	105196
13	19.2	2.8	0.0	chr1	54489335	54489352	(194467070)	+	A-rich	Low_complexity	2	37	(0)	105197
443	25.2	10.7	5.9	chr1	54838497	54838596	(194117826)	C	MIRb	SINE/MIR	(77)	191	84	106011
1432	21.3	4.0	3.7	chr1	54838604	54839032	(194117390)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	16	106013
3047	15.6	8.9	3.5	chr1	55836481	55837204	(193119218)	C	Ricksha_a	DNA/MULE-MuDR	(16)	1165	399	107766
19	16.7	3.4	4.9	chr1	56645326	56645384	(192311038)	+	(GGC)n	Simple_repeat	1	61	(0)	109245
276	18.5	0.0	0.0	chr1	56959891	56959944	(191996478)	C	L2a	LINE/L2	(0)	3426	3373	109859
14	5.8	10.5	2.4	chr1	58816594	58816631	(190139791)	+	(CAGTCCT)n	Simple_repeat	1	42	(0)	113581
390	31.7	4.3	0.5	chr1	58899474	58899676	(190056746)	C	MIRc	SINE/MIR	(32)	236	26	113772
215	27.2	17.4	0.9	chr1	58903525	58903639	(190052783)	C	MIRb	SINE/MIR	(12)	256	119	113783
12	12.0	0.0	6.5	chr1	58903668	58903698	(190052724)	+	(GGCCG)n	Simple_repeat	1	31	(0)	113784
2354	11.4	1.1	0.8	chr1	59088975	59089328	(189867094)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	114173
320	34.2	5.7	4.0	chr1	59215264	59215532	(189740890)	C	L2c	LINE/L2	(2)	3385	3135	114446
827	27.4	8.6	4.5	chr1	60740115	60740584	(188215838)	+	MLT1H	LTR/ERVL-MaLR	16	549	(0)	117036
3582	18.8	9.2	3.8	chr1	62411980	62412751	(186543671)	+	LTR1B1	LTR/ERV1	1	818	(0)	120201
1558	15.6	0.4	0.0	chr1	62423615	62423852	(186532570)	+	AluJb	SINE/Alu	61	299	(13)	120225
594	23.8	15.2	0.8	chr1	62423898	62424235	(186532187)	+	MLT1H2	LTR/ERVL-MaLR	49	521	(28)	120226
328	23.1	3.7	1.3	chr1	62480648	62480726	(186475696)	C	L2a	LINE/L2	(1)	3425	3345	120322
2593	5.6	0.0	0.3	chr1	62480727	62481029	(186475393)	+	AluY	SINE/Alu	1	302	(9)	120323
2166	10.2	1.4	0.0	chr1	63744723	63745005	(185211417)	C	AluSg4	SINE/Alu	(23)	287	1	122615
1370	23.2	9.8	10.8	chr1	63745006	63745335	(185211087)	+	MLT1H	LTR/ERVL-MaLR	202	536	(13)	122614
2798	16.1	6.6	2.1	chr1	66596115	66596691	(182359731)	C	LTR27C	LTR/ERV1	(376)	644	5	127469
612	7.9	20.3	2.6	chr1	66596696	66596812	(182359610)	+	L1MD2	LINE/L1	6197	6339	(20)	127470
322	32.1	6.0	3.5	chr1	66934240	66934384	(182022038)	C	MIR3	SINE/MIR	(35)	173	25	127983
1866	14.8	4.5	1.6	chr1	66934392	66934694	(182021728)	C	AluJr	SINE/Alu	(0)	312	1	127984
1472	16.5	13.3	1.2	chr1	68002505	68002835	(180953587)	C	MSTA	LTR/ERVL-MaLR	(51)	377	1	129962
265	28.6	8.4	0.5	chr1	68002836	68003031	(180953391)	C	Charlie21a	DNA/hAT-Charlie	(922)	291	79	129963
19	6.2	2.8	2.7	chr1	68497219	68497254	(180459168)	+	(GCTGG)n	Simple_repeat	1	37	(0)	130753
2188	28.8	4.0	4.8	chr1	73116570	73117454	(175838968)	+	ERVL-E-int	LTR/ERVL	52	966	(4791)	137002
976	23.3	0.5	0.0	chr1	73117479	73117671	(175838751)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	172	137003
1681	12.7	12.0	2.6	chr1	73472776	73473114	(175483308)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	137449
453	31.3	7.8	9.1	chr1	73473197	73473614	(175482808)	C	MLT1G3	LTR/ERVL-MaLR	(124)	455	1	137450
208	34.7	6.2	2.4	chr1	75101740	75101863	(173854559)	C	MamRTE1	LINE/RTE-BovB	(11)	3801	3673	139537
265	32.9	19.7	0.6	chr1	75102161	75102316	(173854106)	C	MamRTE1	LINE/RTE-BovB	(654)	3158	2966	139537
8068	4.1	0.8	0.2	chr1	75644643	75646421	(173310001)	C	L1PA5	LINE/L1	(3)	6151	4364	140234
354	15.9	0.0	4.2	chr1	75646426	75646497	(173309925)	C	MER39	LTR/ERV1	(113)	594	526	140233
8691	12.2	5.2	0.9	chr1	75646504	75648006	(173308416)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	140235
2461	12.0	9.9	1.5	chr1	76880412	76880817	(172075605)	C	MLT2A1	LTR/ERVL	(0)	444	1	142087
1907	19.7	1.8	5.3	chr1	77469214	77469625	(171486797)	+	MLT2C1	LTR/ERVL	1	397	(0)	142927
1427	25.8	11.0	5.8	chr1	77469626	77469979	(171486443)	C	MLT1H	LTR/ERVL-MaLR	(156)	393	1	142926
349	28.0	10.3	3.7	chr1	78039292	78039454	(170916968)	+	LTR33	LTR/ERVL	13	187	(328)	143984
681	24.7	3.6	0.0	chr1	78039460	78039621	(170916801)	C	MER115	DNA/hAT-Tip100	(14)	679	512	143985
355	25.4	1.6	6.0	chr1	81611691	81611755	(167344667)	+	MER5B	DNA/hAT-Charlie	20	85	(93)	148697
2021	12.2	5.5	2.7	chr1	81611756	81612125	(167344297)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	148698
528	24.8	10.9	7.8	chr1	82963765	82964255	(165992167)	C	MLT1H	LTR/ERVL-MaLR	(0)	569	13	150535
1911	16.9	0.3	1.3	chr1	82964277	82964583	(165991839)	C	AluJb	SINE/Alu	(8)	304	1	150536
2254	16.1	2.7	0.5	chr1	83570666	83571064	(165385358)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	151332
2329	11.8	0.0	0.0	chr1	84338433	84338736	(164617686)	C	AluSx1	SINE/Alu	(7)	305	2	152371
2058	11.0	5.0	8.0	chr1	84338737	84338906	(164617516)	C	THE1B	LTR/ERVL-MaLR	(180)	184	1	152370
8080	17.4	2.4	3.8	chr1	84338907	84339711	(164616711)	C	L1PA15	LINE/L1	(4761)	2024	1233	152368
1960	12.9	5.3	0.0	chr1	86731798	86732084	(162224338)	+	AluSq2	SINE/Alu	1	303	(10)	156004
266	31.8	7.7	0.8	chr1	86849228	86849360	(162107062)	+	L2	LINE/L2	2337	2479	(940)	156213
610	30.5	6.7	6.4	chr1	86849451	86849648	(162106774)	+	MER102b	DNA/hAT-Charlie	2	223	(118)	156215
2067	12.1	0.7	0.4	chr1	86849649	86849967	(162106455)	C	AluSz	SINE/Alu	(0)	312	2	156216
10847	17.8	2.3	0.4	chr1	88917868	88919989	(160036433)	C	L1MD3	LINE/L1	(4941)	2175	4	159209
901	30.1	6.2	9.1	chr1	90574666	90575070	(158381352)	C	MLT1H	LTR/ERVL-MaLR	(4)	545	163	161473
15	8.5	4.7	6.7	chr1	90851702	90851744	(158104678)	+	(GCCCC)n	Simple_repeat	1	45	(0)	161860
14	8.1	0.0	6.7	chr1	92784627	92784656	(156171766)	+	(GGC)n	Simple_repeat	1	30	(0)	165065
15	11.2	0.0	3.2	chr1	92784787	92784821	(156171601)	+	(CCGC)n	Simple_repeat	1	33	(0)	165066
1692	22.8	9.7	0.9	chr1	93716961	93717394	(155239028)	+	MLT1H	LTR/ERVL-MaLR	71	546	(3)	166736
249	30.6	2.7	8.4	chr1	93846011	93846177	(155110245)	+	MIR	SINE/MIR	58	225	(43)	166924
321	27.5	17.5	0.0	chr1	94002397	94002556	(154953866)	C	L2a	LINE/L2	(7)	3419	3226	167148
761	27.4	10.1	0.4	chr1	94002621	94002898	(154953524)	+	L2a	LINE/L2	3012	3319	(107)	167149
581	24.5	12.1	1.4	chr1	94236910	94237116	(154719306)	+	MIR	SINE/MIR	10	241	(21)	167492
2018	25.6	12.7	6.0	chr1	94818824	94819777	(154136645)	C	L1MEh	LINE/L1	(952)	1456	430	168357
399	23.4	6.6	3.0	chr1	94819786	94819917	(154136505)	+	MIR	SINE/MIR	21	157	(105)	168364
40	12.8	3.9	0.0	chr1	94820301	94820377	(154136045)	+	(GCCCCG)n	Simple_repeat	1	80	(0)	168365
14	21.4	0.0	7.1	chr1	97921042	97921097	(151035325)	+	(GCGGC)n	Simple_repeat	1	56	(0)	172697
222	31.2	5.1	4.1	chr1	98106969	98107065	(150849357)	C	L3	LINE/CR1	(116)	3983	3886	172961
206	39.2	10.2	0.6	chr1	98107366	98107542	(150848880)	+	L2c	LINE/L2	3048	3243	(144)	172962
560	35.0	2.2	9.9	chr1	101110104	101110455	(147845967)	+	L2b	LINE/L2	3052	3375	(0)	177500
4309	9.7	4.1	0.3	chr1	102553999	102554611	(146401811)	+	MER11A	LTR/ERVK	630	1266	(0)	179447
3679	21.2	5.4	3.2	chr1	102554612	102555333	(146401089)	+	LTR1D1	LTR/ERV1	161	899	(0)	179446
2948	0.6	0.0	0.6	chr1	104509603	104509915	(144446507)	+	AluYa5	SINE/Alu	1	311	(0)	181773
319	26.0	10.2	8.7	chr1	104509916	104509933	(144446489)	+	L1MEc	LINE/L1	2331	2341	(4122)	181772
1718	17.6	0.0	2.7	chr1	104509934	104510229	(144446193)	+	AluSz6	SINE/Alu	2	289	(23)	181774
34	5.2	0.0	0.0	chr1	108560105	108560144	(140396278)	+	(GGC)n	Simple_repeat	1	40	(0)	186918
247	35.1	8.1	4.1	chr1	109118373	109118761	(139837661)	C	L2b	LINE/L2	(544)	2875	2470	188017
2335	10.3	0.3	0.0	chr1	109118895	109119196	(139837226)	C	AluSx1	SINE/Alu	(9)	303	1	188018
35	8.8	0.0	0.0	chr1	109910719	109910766	(139045656)	+	(GT)n	Simple_repeat	1	48	(0)	189268
19	3.5	3.5	0.0	chr1	109910958	109910986	(139045436)	+	(AGCG)n	Simple_repeat	1	30	(0)	189269
15	17.7	2.6	0.0	chr1	110210231	110210268	(138746154)	+	(GCGCC)n	Simple_repeat	1	39	(0)	189740
354	28.9	7.7	6.2	chr1	111739965	111740156	(137216266)	C	L2a	LINE/L2	(26)	3400	3206	191993
2029	17.8	4.6	1.6	chr1	111820639	111821084	(137135338)	+	MLT1C	LTR/ERVL-MaLR	6	465	(2)	192139
193	10.7	0.0	0.0	chr1	111821161	111821188	(137135234)	+	L2b	LINE/L2	3341	3368	(7)	192140
207	30.9	13.8	0.0	chr1	111821247	111821340	(137135082)	C	MIR3	SINE/MIR	(66)	142	34	192141
208	27.2	15.6	0.0	chr1	113072222	113072324	(135884098)	+	MIRc	SINE/MIR	108	229	(39)	194420
195	25.9	5.5	1.2	chr1	113072597	113072682	(135883740)	C	L2c	LINE/L2	(11)	3376	3287	194421
785	31.5	14.0	2.1	chr1	113406851	113407466	(135548956)	C	L2a	LINE/L2	(252)	3174	2466	194995
13	25.3	1.8	3.6	chr1	113812295	113812349	(135144073)	+	(GCCC)n	Simple_repeat	1	56	(0)	195565
2437	7.8	1.3	0.0	chr1	114780959	114781265	(134175157)	C	AluSz	SINE/Alu	(1)	311	1	197271
12	27.4	2.0	2.0	chr1	115641680	115641729	(133314693)	+	(GTGT)n	Simple_repeat	1	51	(0)	198479
14	23.5	4.3	4.1	chr1	115641866	115641935	(133314487)	+	(GGCTG)n	Simple_repeat	1	73	(0)	198480
15	26.0	3.3	1.6	chr1	115641931	115641991	(133314431)	+	(GGCAGC)n	Simple_repeat	1	63	(0)	198481
13	4.8	4.5	0.0	chr1	115641973	115641994	(133314428)	+	(GCG)n	Simple_repeat	1	23	(0)	198482
13	22.3	4.3	5.5	chr1	115642016	115642085	(133314337)	+	(CGCGGAC)n	Simple_repeat	1	73	(0)	198483
201	29.6	14.8	2.2	chr1	116909379	116909513	(132046909)	+	MIR3	SINE/MIR	30	184	(24)	200485
19	12.6	4.4	2.1	chr1	116909989	116910033	(132046389)	+	GA-rich	Low_complexity	1	47	(0)	200486
29	27.9	0.9	3.6	chr1	116910072	116910182	(132046240)	+	GA-rich	Low_complexity	1	112	(0)	200486
15	16.4	2.9	0.0	chr1	119648153	119648186	(129308236)	+	(GCG)n	Simple_repeat	1	35	(0)	204334
57	3.4	0.0	0.0	chr1	119648189	119648248	(129308174)	+	(GCTG)n	Simple_repeat	1	60	(0)	204335
11077	11.6	3.4	0.1	chr1	119700939	119702512	(129253910)	+	MSTA-int	LTR/ERVL-MaLR	3	1631	(0)	204418
1059	17.2	11.1	0.5	chr1	119702513	119702722	(129253700)	+	MSTA	LTR/ERVL-MaLR	1	235	(193)	204418
940	24.3	14.8	4.3	chr1	121159778	121160234	(127796188)	+	MLT1H	LTR/ERVL-MaLR	1	487	(2)	206650
745	30.3	2.8	0.9	chr1	121160246	121160458	(127795964)	C	LTR67B	LTR/ERVL	(78)	542	326	206651
13	35.2	0.0	3.9	chr1	121396747	121396824	(127559598)	+	(CGC)n	Simple_repeat	1	78	(0)	207015
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
401	10.2	0.5	8.0	chr1	144858554	144859417	(104097005)	+	(AGCC)n	Simple_repeat	1	868	(0)	210129
13	16.9	0.0	0.0	chr1	145823942	145823968	(103132454)	+	(GCC)n	Simple_repeat	1	27	(0)	211601
14	0.0	0.0	0.0	chr1	147172643	147172660	(101783762)	+	(GCC)n	Simple_repeat	1	18	(0)	213747
202	28.4	8.7	4.0	chr1	147242302	147242400	(101714022)	+	L2b	LINE/L2	3271	3374	(1)	213841
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
2228	8.9	0.3	0.0	chr1	148335176	148335467	(100620955)	C	AluSx	SINE/Alu	(19)	293	1	215517
2675	25.5	9.6	7.6	chr1	150165750	150166397	(98790025)	+	ERV3-16A3_I-int	LTR/ERVL	233	901	(4325)	218435
2351	9.6	0.3	0.3	chr1	150166398	150166709	(98789713)	C	AluSx1	SINE/Alu	(0)	312	1	218436
12	24.7	3.6	3.5	chr1	150235768	150235823	(98720599)	+	(TCT)n	Simple_repeat	1	58	(0)	218581
36	17.6	0.0	2.8	chr1	150236005	150236075	(98720347)	+	(CA)n	Simple_repeat	1	71	(0)	218582
11	19.4	5.3	7.6	chr1	150974454	150974528	(97981894)	+	(CGCCTCC)n	Simple_repeat	1	79	(0)	220231
28	16.0	2.6	5.1	chr1	150974727	150974803	(97981619)	+	(CCG)n	Simple_repeat	1	79	(0)	220232
16	13.2	0.0	2.9	chr1	150974800	150974834	(97981588)	+	(GCCGA)n	Simple_repeat	1	35	(0)	220233
53	0.0	0.0	0.0	chr1	151511436	151511483	(97444939)	+	(GCCCGA)n	Simple_repeat	1	48	(0)	221378
12	17.5	3.1	0.0	chr1	153958498	153958529	(94997893)	+	(CTCC)n	Simple_repeat	1	33	(0)	225133
16	24.8	0.0	3.6	chr1	153958537	153958592	(94997830)	+	(GCCGCC)n	Simple_repeat	1	56	(0)	225134
19	25.9	0.0	4.5	chr1	153958837	153958903	(94997519)	+	GA-rich	Low_complexity	1	67	(0)	225135
15	25.2	1.7	3.3	chr1	155745787	155745846	(93210576)	+	(GCGGC)n	Simple_repeat	1	61	(0)	228691
231	28.1	15.1	1.0	chr1	156457093	156457189	(92499233)	C	L2c	LINE/L2	(14)	3373	3261	230180
31	23.7	0.0	0.0	chr1	156660382	156660448	(92295974)	+	(GT)n	Simple_repeat	1	67	(0)	230532
13	16.3	0.0	5.3	chr1	157045603	157045640	(91910782)	+	G-rich	Low_complexity	1	38	(0)	231176
19	26.6	0.0	0.0	chr1	157045824	157045877	(91910545)	+	(CCTC)n	Simple_repeat	1	54	(0)	231177
23	16.0	3.5	1.7	chr1	157046168	157046260	(91910162)	+	(CCGCCA)n	Simple_repeat	1	94	(0)	231178
14	21.3	2.2	2.2	chr1	157046335	157046379	(91910043)	+	(CCCGTG)n	Simple_repeat	1	46	(0)	231179
12	12.6	0.0	3.6	chr1	161132482	161132509	(87823913)	+	(CGGCC)n	Simple_repeat	1	28	(0)	236930
24	19.9	1.3	6.2	chr1	161132588	161132666	(87823756)	+	(CCG)n	Simple_repeat	1	80	(0)	236931
19	12.4	0.0	0.0	chr1	161399246	161399280	(87557142)	+	(GCCGGA)n	Simple_repeat	1	35	(0)	237469
20879	15.2	2.0	0.9	chr1	161483098	161487895	(87468527)	C	HUERS-P3-int	LTR/ERV1	(3810)	5109	1	237613
12	20.2	2.9	0.0	chr1	161524527	161524560	(87431862)	+	(AGCTG)n	Simple_repeat	1	35	(0)	237664
29	0.0	0.0	0.0	chr1	162069751	162069777	(86886645)	+	(CCGCCA)n	Simple_repeat	1	27	(0)	238552
12	24.1	0.0	2.4	chr1	166839354	166839394	(82117028)	+	(GGCGCC)n	Simple_repeat	1	41	(0)	245775
209	21.1	0.0	0.0	chr1	167876660	167876697	(81079725)	+	MIRb	SINE/MIR	26	63	(205)	247468
375	26.5	15.0	7.5	chr1	167876700	167876963	(81079459)	+	MLT1H2	LTR/ERVL-MaLR	3	327	(222)	247469
2545	6.1	4.2	0.3	chr1	168191590	168191883	(80764539)	+	AluY	SINE/Alu	1	306	(5)	247982
14	19.3	1.6	7.9	chr1	169106093	169106154	(79850268)	+	(CGCGCC)n	Simple_repeat	1	63	(0)	249448
28	3.0	2.9	0.0	chr1	169106609	169106642	(79849780)	+	(CCG)n	Simple_repeat	1	35	(0)	249449
14	28.5	3.1	1.5	chr1	171841146	171841210	(77115212)	+	(GGTGCT)n	Simple_repeat	1	67	(0)	253434
18	12.1	0.0	5.0	chr1	171841403	171841442	(77114980)	+	G-rich	Low_complexity	1	40	(0)	253435
43	0.0	0.0	0.0	chr1	172359126	172359162	(76597260)	+	(AC)n	Simple_repeat	1	37	(0)	254131
56	15.0	6.3	0.7	chr1	173791278	173791404	(75165018)	+	(TA)n	Simple_repeat	1	135	(0)	256099
700	19.4	13.0	0.0	chr1	173791407	173791540	(75164882)	+	AluJr	SINE/Alu	136	289	(23)	256100
2388	10.3	0.0	3.0	chr1	173791549	173791887	(75164535)	+	7SK	RNA	2	330	(1)	256101
2177	11.9	5.6	1.7	chr1	175534755	175535114	(73421308)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	258826
1284	24.3	11.3	7.3	chr1	177886070	177886592	(71069830)	+	MLT1H	LTR/ERVL-MaLR	1	547	(2)	262231
402	24.8	2.1	1.4	chr1	177886695	177886833	(71069589)	C	Tigger15a	DNA/TcMar-Tigger	(10)	705	566	262232
7940	9.0	1.6	0.2	chr1	178198366	178199441	(70756981)	C	L1P2	LINE/L1	(5092)	1092	1	262741
4279	12.6	3.3	0.8	chr1	178763687	178764785	(70191637)	C	L1PA15	LINE/L1	(3190)	3483	2352	263629
2013	9.1	9.1	3.2	chr1	178764786	178765159	(70191263)	+	MSTA	LTR/ERVL-MaLR	1	398	(30)	263630
464	12.1	0.0	0.0	chr1	178765160	178765225	(70191197)	C	AluSz6	SINE/Alu	(17)	295	230	263631
759	33.4	10.9	8.7	chr1	178965493	178966171	(69990251)	C	L3	LINE/CR1	(831)	3268	2573	263918
11	10.2	2.7	7.9	chr1	181482618	181482654	(67473768)	+	(GCCTCT)n	Simple_repeat	1	38	(0)	268056
17	29.0	0.0	1.7	chr1	181482800	181482859	(67473563)	+	(CGCC)n	Simple_repeat	1	60	(0)	268057
310	32.3	19.1	5.2	chr1	182028926	182029560	(66926862)	+	L2b	LINE/L2	2539	3298	(77)	268744
1850	13.5	3.3	0.4	chr1	182696384	182696649	(66259773)	C	AluSx1	SINE/Alu	(38)	274	1	269889
1454	24.2	6.8	6.8	chr1	182696710	182697249	(66259173)	C	MLT1H	LTR/ERVL-MaLR	(9)	540	1	269890
41	4.1	1.9	1.9	chr1	184386769	184386820	(64569602)	+	(AC)n	Simple_repeat	1	53	(0)	272566
12	22.4	3.9	3.8	chr1	184387016	184387066	(64569356)	+	(CCCT)n	Simple_repeat	1	53	(0)	272567
485	27.9	14.1	3.4	chr1	185432537	185432653	(63523769)	+	MIRb	SINE/MIR	32	160	(108)	274248
1238	24.7	15.8	3.4	chr1	185432654	185432770	(63523652)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	405	274249
1688	15.8	7.3	0.4	chr1	185432771	185433048	(63523374)	C	AluJb	SINE/Alu	(13)	299	1	274250
1238	24.7	15.8	3.4	chr1	185433049	185433408	(63523014)	C	MLT1H	LTR/ERVL-MaLR	(145)	404	1	274249
505	19.7	7.6	2.4	chr1	185569732	185569856	(63386566)	C	L2c	LINE/L2	(4)	3383	3252	274463
343	30.9	0.0	8.7	chr1	187326709	187326846	(61629576)	+	MLT1H	LTR/ERVL-MaLR	424	549	(0)	276861
393	33.0	6.9	8.0	chr1	187326856	187327366	(61629056)	C	LTR104_Mam	LTR/Gypsy	(946)	563	59	276862
1511	29.9	6.5	2.1	chr1	193955778	193956293	(55000129)	C	MLT1H	LTR/ERVL-MaLR	(5)	544	5	285515
2327	11.9	0.6	1.4	chr1	197872925	197873282	(51083140)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	290482
780	17.0	5.8	7.2	chr1	197873283	197873454	(51082968)	+	L1ME3A	LINE/L1	5603	5768	(405)	290481
1712	23.2	1.9	0.0	chr1	199407106	199407463	(49548959)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	292461
252	25.4	0.0	0.0	chr1	201480400	201480458	(47475964)	+	CR1-3_Croc	LINE/CR1	2747	2805	(800)	296096
41	0.0	0.0	0.0	chr1	201480539	201480576	(47475846)	+	(GCGGG)n	Simple_repeat	1	38	(0)	296097
455	23.0	4.4	0.6	chr1	201480658	201480810	(47475612)	+	MER5B	DNA/hAT-Charlie	5	161	(28)	296098
17	24.1	0.0	2.0	chr1	201480833	201480883	(47475539)	+	(GGCGG)n	Simple_repeat	1	51	(0)	296099
6162	10.8	15.7	2.1	chr1	204751965	204752739	(44203683)	+	MER52C	LTR/ERV1	1	954	(324)	302189
1734	16.1	3.0	1.3	chr1	205141373	205141671	(43814751)	+	AluJo	SINE/Alu	1	304	(8)	302876
17	26.0	0.0	5.6	chr1	205631508	205631578	(43324844)	+	(CCCGGC)n	Simple_repeat	1	71	(0)	303802
15	29.1	1.9	0.0	chr1	205631725	205631778	(43324644)	+	(CGG)n	Simple_repeat	1	55	(0)	303803
970	24.7	11.2	5.4	chr1	206178291	206178747	(42777675)	+	MLT1H	LTR/ERVL-MaLR	1	487	(2)	304712
803	28.4	2.8	0.9	chr1	206178759	206178971	(42777451)	C	LTR67B	LTR/ERVL	(78)	542	326	304711
11	17.3	0.0	5.6	chr1	210233996	210234031	(38722391)	+	(AATAAG)n	Simple_repeat	1	36	(0)	310826
1115	26.2	11.8	1.9	chr1	210501392	210501803	(38454619)	C	LTR33B	LTR/ERVL	(11)	492	40	311258
523	28.4	9.3	6.1	chr1	211241922	211242256	(37714166)	+	MLT1H	LTR/ERVL-MaLR	81	395	(94)	312344
15	20.4	0.0	0.0	chr1	211259202	211259230	(37697192)	+	(C)n	Simple_repeat	1	29	(0)	312388
2154	11.1	2.5	4.1	chr1	211540859	211541225	(37415197)	C	THE1B	LTR/ERVL-MaLR	(3)	361	1	312901
21	28.1	3.9	4.4	chr1	212432907	212433036	(36523386)	+	(GCCCTG)n	Simple_repeat	1	135	(0)	314490
13	22.0	2.2	2.2	chr1	212665501	212665545	(36290877)	+	(CTCTTCC)n	Simple_repeat	1	46	(0)	314923
14	12.2	0.0	0.0	chr1	212665650	212665676	(36290746)	+	(CTCCC)n	Simple_repeat	1	27	(0)	314924
5532	11.3	2.6	2.8	chr1	212948260	212949098	(36007324)	C	L1PB2	LINE/L1	(372)	5779	4936	315488
687	24.9	7.1	4.9	chr1	213014842	213015145	(35941277)	+	MER113A	DNA/hAT-Charlie	3	313	(1)	315576
12	25.3	1.6	6.2	chr1	213015515	213015577	(35940845)	+	(GCCC)n	Simple_repeat	1	64	(0)	315577
322	32.9	4.2	1.8	chr1	213660935	213661098	(35295324)	C	L3b	LINE/CR1	(79)	5153	4986	316576
302	30.5	7.2	3.1	chr1	220160317	220160475	(28795947)	+	L2c	LINE/L2	2694	2859	(560)	325798
315	15.2	7.0	2.9	chr1	220160483	220160550	(28795872)	C	MIRb	SINE/MIR	(0)	268	198	325799
1020	19.2	3.2	6.8	chr1	222465900	222466195	(26490227)	+	MER33	DNA/hAT-Charlie	17	301	(23)	329168
15	18.9	2.3	2.2	chr1	222814877	222814920	(26141502)	+	(CCCTCTG)n	Simple_repeat	1	45	(0)	329730
2127	11.2	4.1	3.3	chr1	222877206	222877566	(26078856)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	329837
282	33.3	9.9	7.4	chr1	222877594	222878014	(26078408)	C	L2c	LINE/L2	(39)	3348	2916	329838
756	24.4	1.6	2.4	chr1	223711940	223712168	(25244254)	+	MIRb	SINE/MIR	12	238	(30)	331089
19	20.6	3.0	4.3	chr1	223712887	223712965	(25243457)	+	(GCGG)n	Simple_repeat	1	77	(0)	331090
19	3.7	0.0	3.3	chr1	223845786	223845815	(25110607)	+	(GGC)n	Simple_repeat	1	30	(0)	331313
17	19.6	6.7	3.8	chr1	223845956	223846030	(25110392)	+	(CCGCG)n	Simple_repeat	1	80	(0)	331314
13	7.5	7.1	0.0	chr1	224183155	224183182	(24773240)	+	(GGCG)n	Simple_repeat	1	30	(0)	331974
14	5.0	0.0	0.0	chr1	224183257	224183277	(24773145)	+	(GCC)n	Simple_repeat	1	21	(0)	331975
13	14.6	8.5	2.0	chr1	224357171	224357217	(24599205)	+	(CTGCC)n	Simple_repeat	1	51	(0)	332414
14	11.6	3.5	0.0	chr1	224873431	224873459	(24082963)	+	(TCAT)n	Simple_repeat	1	30	(0)	333289
25	21.2	3.8	2.4	chr1	224873458	224873537	(24082885)	+	(TCTCC)n	Simple_repeat	1	83	(0)	333290
200	25.3	3.9	2.6	chr1	224873723	224873799	(24082623)	C	MIR3	SINE/MIR	(62)	146	69	333291
1363	20.5	8.2	3.5	chr1	224873854	224874201	(24082221)	C	MER57E1	LTR/ERV1	(2)	370	5	333292
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
1071	15.5	0.0	0.0	chr1	225791016	225791170	(23165252)	+	AluSz	SINE/Alu	1	155	(157)	334591
2985	13.9	6.2	8.0	chr1	225791171	225791259	(23165163)	C	LTR14B	LTR/ERVK	(0)	608	524	334592
2271	8.2	1.4	0.7	chr1	225791260	225791550	(23164872)	+	AluY	SINE/Alu	1	293	(18)	334593
12	23.0	6.9	1.6	chr1	226062414	226062471	(22893951)	+	G-rich	Low_complexity	1	62	(0)	335129
22	24.4	3.0	4.8	chr1	226062503	226062528	(22893894)	+	G-rich	Low_complexity	1	52	(51)	335129
17	25.9	3.9	0.0	chr1	226062529	226062579	(22893843)	+	(GC)n	Simple_repeat	1	53	(0)	335130
22	24.4	3.0	4.8	chr1	226062580	226062602	(22893820)	+	G-rich	Low_complexity	53	103	(0)	335129
20	17.0	1.7	5.1	chr1	226062730	226062787	(22893635)	+	(CGC)n	Simple_repeat	1	59	(0)	335131
1391	5.8	0.0	0.0	chr1	227551606	227551779	(21404643)	C	L1PA5	LINE/L1	(0)	6154	5981	337636
22076	8.3	2.1	0.7	chr1	227551780	227556010	(21400412)	+	L1PA4	LINE/L1	2202	6465	(5)	337635
53	0.0	0.0	0.0	chr1	227953874	227953918	(21002504)	+	(GT)n	Simple_repeat	1	45	(0)	338094
49	3.0	4.1	2.6	chr1	227953919	227953991	(21002431)	+	(AGAGAC)n	Simple_repeat	1	76	(0)	338095
3445	19.6	11.5	2.1	chr1	227954212	227955110	(21001312)	C	L1MD2	LINE/L1	(48)	6311	5318	338096
531	30.7	8.5	6.7	chr1	228224847	228225352	(20731070)	C	MLT1H1	LTR/ERVL-MaLR	(8)	547	32	338465
826	7.2	8.3	0.0	chr1	228555793	228555903	(20400519)	+	5S	rRNA	1	121	(0)	338873
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
563	22.5	0.0	1.6	chr1	228647911	228648032	(20308390)	C	5S	rRNA	(1)	120	1	338982
296	30.1	5.7	2.2	chr1	229218070	229218205	(19738217)	+	MER5A	DNA/hAT-Charlie	27	167	(22)	339876
578	17.8	4.8	0.8	chr1	229218265	229218383	(19738039)	C	L1MC4	LINE/L1	(0)	8042	7919	339877
16	23.3	2.2	0.0	chr1	229626252	229626296	(19330126)	+	(GCC)n	Simple_repeat	1	46	(0)	340622
439	32.7	13.4	4.6	chr1	229895222	229895593	(19060829)	+	L2a	LINE/L2	2620	3029	(390)	341092
11	20.6	5.1	0.0	chr1	230426142	230426180	(18530242)	+	(GCGGCGG)n	Simple_repeat	1	41	(0)	341848
16	18.6	6.1	0.0	chr1	230426471	230426519	(18529903)	+	G-rich	Low_complexity	1	52	(0)	341849
2191	15.2	1.8	1.1	chr1	230806564	230806941	(18149481)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	342446
24	18.8	1.6	3.1	chr1	231421889	231421952	(17534470)	+	(GGC)n	Simple_repeat	1	65	(0)	343471
12	13.9	0.0	0.0	chr1	231422196	231422219	(17534203)	+	(GCC)n	Simple_repeat	1	24	(0)	343472
18	20.7	1.6	4.8	chr1	231422324	231422384	(17534038)	+	G-rich	Low_complexity	1	62	(0)	343473
12	17.2	4.9	2.3	chr1	231422410	231422450	(17533972)	+	(CCTCGG)n	Simple_repeat	1	43	(0)	343474
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
277	33.7	0.0	0.0	chr1	231672861	231672882	(17283540)	C	MER5A1	DNA/hAT-Charlie	(61)	105	58	343896
319	19.2	0.0	0.0	chr1	231672883	231672934	(17283488)	+	MER5A	DNA/hAT-Charlie	118	169	(20)	343897
277	33.7	0.0	0.0	chr1	231672935	231672952	(17283470)	C	MER5A1	DNA/hAT-Charlie	(61)	57	14	343896
1192	28.7	8.3	6.7	chr1	231999157	231999813	(16956609)	+	L1MDb	LINE/L1	6	749	(5660)	344362
41	0.0	2.4	0.0	chr1	231999814	231999854	(16956568)	+	(AAC)n	Simple_repeat	1	42	(0)	344363
21	17.3	0.0	2.4	chr1	233613655	233613696	(15342726)	+	(CA)n	Simple_repeat	1	42	(0)	346666
28	18.4	2.9	1.4	chr1	233614033	233614102	(15342320)	+	G-rich	Low_complexity	1	72	(0)	346667
300	31.0	9.8	0.0	chr1	234373847	234373975	(14582447)	C	MIRb	SINE/MIR	(86)	182	40	347763
12	19.3	0.0	5.1	chr1	234600126	234600164	(14356258)	+	G-rich	Low_complexity	1	39	(0)	348157
37	15.3	0.0	1.4	chr1	234600189	234600258	(14356164)	+	(GCCCC)n	Simple_repeat	1	70	(0)	348158
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
2246	11.0	4.9	3.1	chr1	238057687	238058043	(10898379)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	354153
11387	9.6	2.1	0.3	chr1	238058071	238059621	(10896801)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	354153
258	35.5	1.8	0.0	chr1	238700829	238700935	(10255487)	C	Charlie15a	DNA/hAT-Charlie	(25)	199	91	355065
1809	21.1	1.8	1.6	chr1	238701012	238701391	(10255031)	+	MSTD	LTR/ERVL-MaLR	5	385	(11)	355066
32	23.7	2.2	1.1	chr1	241357511	241357599	(7598823)	+	(GATG)n	Simple_repeat	1	91	(0)	359176
2267	11.4	0.3	0.3	chr1	241868093	241868398	(7088024)	+	AluSz	SINE/Alu	1	306	(6)	359984
1024	20.6	0.0	0.0	chr1	241868514	241868683	(7087739)	+	AluJr	SINE/Alu	129	298	(14)	359985
1132	24.2	10.7	0.2	chr1	241868688	241869088	(7087334)	C	L1M4	LINE/L1	(1548)	4598	4151	359981
16	15.1	2.6	2.5	chr1	243849367	243849405	(5107017)	+	(ACCC)n	Simple_repeat	1	40	(0)	363166
12	17.6	2.4	4.7	chr1	244451566	244451607	(4504815)	+	(CCCGGCG)n	Simple_repeat	1	43	(0)	364208
19	24.9	1.4	4.1	chr1	244451927	244451998	(4504424)	+	(CCCGC)n	Simple_repeat	1	73	(0)	364209
2290	8.2	0.7	1.3	chr1	244460632	244460936	(4495486)	+	AluSz	SINE/Alu	1	303	(9)	364216
17	15.9	6.8	0.0	chr1	244461078	244461121	(4495301)	+	(TTTC)n	Simple_repeat	1	47	(0)	364217
313	27.5	3.5	9.2	chr10	4467227	4467346	(129330076)	C	MLT1H	LTR/ERVL-MaLR	(210)	339	227	376512
24	25.3	6.2	3.6	chr10	4467379	4467385	(129330037)	+	(TCTTTC)n	Simple_repeat	1	56	(82)	376513
312	27.4	7.8	1.9	chr10	16916344	16916451	(116880971)	+	MER117	DNA/hAT-Charlie	9	123	(74)	396568
18	0.0	0.0	0.0	chr10	17616645	17616664	(116180758)	+	(A)n	Simple_repeat	1	20	(0)	397751
15	25.3	1.5	4.5	chr10	17616954	17617019	(116180403)	+	(GCCCCCT)n	Simple_repeat	1	67	(0)	397752
14	10.7	0.0	5.9	chr10	21527274	21527307	(112270115)	+	G-rich	Low_complexity	1	34	(0)	403873
610	22.4	8.6	0.5	chr10	22555200	22555401	(111242021)	+	MIR	SINE/MIR	15	234	(28)	405437
1694	17.8	1.9	7.8	chr10	22685413	22685743	(111111679)	+	AluJr	SINE/Alu	1	311	(1)	405626
315	33.6	5.3	0.0	chr10	23920616	23920740	(109876682)	C	L3	LINE/CR1	(73)	4026	3895	407647
2302	13.9	3.0	0.3	chr10	23920764	23921117	(109876305)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	407648
244	22.4	6.2	7.2	chr10	28010720	28010849	(105786573)	C	MLT1G3	LTR/ERVL-MaLR	(16)	579	405	414325
413	23.0	2.2	0.0	chr10	28010986	28011072	(105786350)	C	MLT1H2	LTR/ERVL-MaLR	(336)	153	65	414326
16	15.5	2.8	0.0	chr10	28302635	28302681	(105494741)	+	(CGCCCC)n	Simple_repeat	1	48	(0)	414797
13	25.0	0.0	0.0	chr10	28303080	28303117	(105494305)	+	(GGCGG)n	Simple_repeat	1	38	(0)	414798
321	31.2	2.7	0.9	chr10	31117549	31117658	(102679764)	+	MIR3	SINE/MIR	49	160	(48)	419866
949	18.8	2.0	6.6	chr10	31117664	31117831	(102679591)	+	MER58A	DNA/hAT-Charlie	24	190	(34)	419867
2304	10.6	0.0	0.3	chr10	31117832	31118133	(102679289)	+	AluSx	SINE/Alu	1	301	(11)	419868
269	23.5	10.6	0.8	chr10	33005964	33006091	(100791331)	C	MIRc	SINE/MIR	(73)	195	56	422615
869	20.8	1.2	5.0	chr10	34137317	34137574	(99659848)	+	MLT1E1A	LTR/ERVL-MaLR	432	679	(1)	424330
267	29.7	5.9	0.0	chr10	34137577	34137687	(99659735)	+	MLT1H2	LTR/ERVL-MaLR	78	195	(294)	424331
17	19.1	0.0	5.7	chr10	37976528	37976580	(95820842)	+	(CCCGG)n	Simple_repeat	1	53	(0)	430348
291	15.6	0.0	0.0	chr10	42894686	42894730	(90902692)	C	MLT1H2	LTR/ERVL-MaLR	(1)	548	504	432709
540	27.8	14.8	3.2	chr10	42894782	42895119	(90902303)	C	MLT1H2	LTR/ERVL-MaLR	(42)	447	64	432709
18	10.4	0.0	0.0	chr10	43138783	43138813	(90658609)	+	(TGTTT)n	Simple_repeat	1	31	(0)	432987
268	28.7	4.9	1.4	chr10	45594285	45594422	(88203000)	C	MIR3	SINE/MIR	(18)	190	48	436270
37	0.0	2.6	0.0	chr10	45594600	45594637	(88202785)	+	(CCCAG)n	Simple_repeat	1	39	(0)	436271
14	8.1	0.0	6.7	chr10	45594704	45594733	(88202689)	+	(GGC)n	Simple_repeat	1	30	(0)	436272
12	21.5	6.0	1.9	chr10	45727311	45727360	(88070062)	+	(GGCTG)n	Simple_repeat	1	53	(0)	436502
12	20.4	0.0	0.0	chr10	46030399	46030427	(87766995)	+	GA-rich	Low_complexity	1	29	(0)	437045
484	26.5	9.0	6.3	chr10	46228457	46228694	(87568728)	+	L1M2	LINE/L1	819	1063	(5786)	437378
1311	29.0	1.6	0.3	chr10	46228702	46229067	(87568355)	+	L1PA17	LINE/L1	888	1258	(5615)	437379
203	41.2	6.2	3.4	chr10	49512038	49512301	(84285121)	+	L3b	LINE/CR1	4539	4810	(422)	441956
2028	13.1	0.3	3.5	chr10	52438020	52438331	(81359091)	C	AluSq2	SINE/Alu	(11)	302	1	446298
834	24.0	0.0	7.1	chr10	52438332	52438498	(81358924)	C	MER20	DNA/hAT-Charlie	(34)	185	23	446297
18	17.6	0.0	0.0	chr10	52438573	52438604	(81358818)	+	(T)n	Simple_repeat	1	32	(0)	446299
3897	5.3	4.7	0.2	chr10	53485154	53485643	(80311779)	C	MER9a1	LTR/ERVK	(0)	513	1	447668
3035	5.8	0.0	0.3	chr10	53485644	53486023	(80311399)	C	HERVK9-int	LTR/ERVK	(0)	6021	5643	447668
2289	12.8	3.0	0.8	chr10	54056305	54056660	(79740762)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	448377
9930	12.2	3.2	4.0	chr10	54056663	54058252	(79739170)	C	THE1B-int	LTR/ERVL-MaLR	(2)	1578	1	448378
354	29.5	5.1	5.1	chr10	58189464	58189638	(75607784)	+	MLT1H	LTR/ERVL-MaLR	210	384	(165)	453779
14	14.4	5.0	2.4	chr10	59362668	59362707	(74434715)	+	G-rich	Low_complexity	1	42	(0)	455458
2466	13.6	1.5	1.5	chr10	62924334	62924804	(70872618)	C	MER52C	LTR/ERV1	(788)	490	20	460833
14	15.2	0.0	7.1	chr10	63521224	63521265	(70276157)	+	(GCCCTG)n	Simple_repeat	1	42	(0)	461935
13	27.7	1.5	4.5	chr10	63521301	63521323	(70276099)	+	G-rich	Low_complexity	1	66	(0)	461936
17	8.3	4.8	4.5	chr10	63521324	63521365	(70276057)	+	(GGCG)n	Simple_repeat	1	44	(0)	461937
980	27.4	17.9	1.8	chr10	69444264	69444725	(64352697)	C	MLT1H	LTR/ERVL-MaLR	(5)	550	3	471616
18	17.2	0.0	2.4	chr10	70404143	70404204	(63393218)	+	(GCT)n	Simple_repeat	1	60	(0)	473402
14	21.3	1.8	5.4	chr10	70404189	70404243	(63393179)	+	(CTGAGG)n	Simple_repeat	1	56	(0)	473403
22	15.4	0.0	0.0	chr10	70404220	70404300	(63393122)	+	(GCGGCG)n	Simple_repeat	1	81	(0)	473404
15	15.0	2.4	4.8	chr10	70404332	70404372	(63393050)	+	(GCC)n	Simple_repeat	1	42	(0)	473405
16	23.7	4.4	2.8	chr10	73168204	73168271	(60629151)	+	G-rich	Low_complexity	1	71	(0)	478773
35	0.0	0.0	0.0	chr10	73168309	73168340	(60629082)	+	(GAG)n	Simple_repeat	1	32	(0)	478774
28	28.2	1.6	4.0	chr10	73495826	73495949	(60301473)	+	G-rich	Low_complexity	1	126	(0)	479398
1667	17.9	5.8	2.3	chr10	75254347	75254647	(58542775)	C	AluJo	SINE/Alu	(0)	312	1	482753
1621	21.4	4.8	6.1	chr10	75254648	75254740	(58542682)	+	L1MEd	LINE/L1	1390	1482	(5621)	482752
16	23.6	3.3	3.2	chr10	79068720	79068780	(54728642)	+	A-rich	Low_complexity	1	63	(0)	488998
17	6.8	6.5	0.0	chr10	79068813	79068843	(54728579)	+	(GCG)n	Simple_repeat	1	33	(0)	488999
26	24.4	5.0	1.9	chr10	79069020	79069120	(54728302)	+	(AGCG)n	Simple_repeat	1	106	(0)	489000
14	7.8	0.0	6.5	chr10	79069140	79069170	(54728252)	+	(CGGAG)n	Simple_repeat	1	31	(0)	489001
16	17.2	2.4	2.4	chr10	79069217	79069257	(54728165)	+	(CGG)n	Simple_repeat	1	42	(0)	489002
16	3.8	3.5	3.3	chr10	80454341	80454369	(53343053)	+	(GCC)n	Simple_repeat	1	30	(0)	491254
11	15.2	2.4	7.0	chr10	80454606	80454647	(53342775)	+	G-rich	Low_complexity	1	43	(0)	491255
1353	27.9	11.4	1.9	chr10	80477809	80478759	(53318663)	+	HAL1	LINE/L1	579	1625	(882)	491287
12	15.6	7.3	5.1	chr10	84328520	84328574	(49468848)	+	(GCTGCGC)n	Simple_repeat	1	59	(0)	496706
18	20.3	2.2	0.0	chr10	86521644	86521688	(47275734)	+	(GCC)n	Simple_repeat	1	46	(0)	499653
14	13.2	2.9	2.8	chr10	86521953	86521987	(47275435)	+	G-rich	Low_complexity	1	36	(0)	499654
852	22.5	9.7	1.4	chr10	86522398	86522681	(47274741)	+	L1MC5a	LINE/L1	2466	2775	(2)	499655
722	21.0	2.7	6.7	chr10	87652381	87652574	(46144848)	+	MER5A	DNA/hAT-Charlie	1	186	(3)	501602
269	18.5	1.8	0.0	chr10	87652588	87652641	(46144781)	C	MER5B	DNA/hAT-Charlie	(37)	141	87	501603
1386	15.1	0.0	4.7	chr10	90163704	90163960	(43633462)	C	7SK	RNA	(86)	245	1	505463
298	28.6	14.6	0.0	chr10	90173439	90173543	(43623879)	C	MIR	SINE/MIR	(38)	224	102	505479
901	29.5	5.9	0.7	chr10	90173733	90174039	(43623383)	C	MLT1H	LTR/ERVL-MaLR	(224)	325	2	505480
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
196	27.5	24.1	0.8	chr10	93757092	93757212	(40040210)	C	MIRc	SINE/MIR	(110)	158	1	511731
209	26.2	16.3	1.0	chr10	96587309	96587412	(37210010)	+	MIRc	SINE/MIR	84	206	(62)	516222
2005	15.9	6.4	1.1	chr10	96853722	96854078	(36943344)	C	THE1D	LTR/ERVL-MaLR	(4)	377	1	516845
245	19.2	5.5	1.9	chr10	96854116	96854168	(36943254)	C	MLT1H	LTR/ERVL-MaLR	(326)	163	109	516844
307	23.1	2.5	1.3	chr10	96854230	96854308	(36943114)	C	MLT1H	LTR/ERVL-MaLR	(458)	91	12	516844
325	35.1	7.9	0.5	chr10	97723285	97723496	(36073926)	C	MIRb	SINE/MIR	(16)	252	24	518589
1720	9.8	4.5	8.0	chr10	97723622	97723741	(36073681)	+	AluSx1	SINE/Alu	1	120	(192)	518590
695	25.0	10.8	12.3	chr10	98391555	98391978	(35405444)	+	MLT1H	LTR/ERVL-MaLR	4	420	(129)	519836
386	23.3	11.9	4.3	chr10	100680702	100680840	(33116582)	+	MIRb	SINE/MIR	102	252	(16)	523795
13	21.1	4.5	5.7	chr10	101230283	101230349	(32567073)	+	(CCGGCT)n	Simple_repeat	1	70	(0)	524696
21	38.8	0.0	0.0	chr10	101230560	101230652	(32566770)	+	(GT)n	Simple_repeat	1	93	(0)	524697
18	15.3	0.0	2.6	chr10	101570224	101570262	(32227160)	+	(TCCAC)n	Simple_repeat	1	39	(0)	525306
13	10.6	0.0	8.3	chr10	101570298	101570333	(32227089)	+	(CCCCA)n	Simple_repeat	1	36	(0)	525307
15	15.2	0.0	9.4	chr10	101570421	101570473	(32226949)	+	(CCCGC)n	Simple_repeat	1	53	(0)	525308
12	15.3	5.3	2.5	chr10	101695111	101695148	(32102274)	+	(GCCCGA)n	Simple_repeat	1	40	(0)	525478
439	29.9	5.8	2.4	chr10	102244714	102244916	(31552506)	+	MIR3	SINE/MIR	4	206	(2)	526576
264	24.8	2.8	18.4	chr10	102981819	102981986	(30815436)	C	MLT1H	LTR/ERVL-MaLR	(171)	378	238	528003
2537	8.2	0.0	0.0	chr10	103955977	103956281	(29841141)	C	AluSx1	SINE/Alu	(7)	305	1	529965
413	34.6	5.9	0.6	chr10	103956327	103956486	(29840936)	C	MER91A	DNA/hAT-Tip100	(0)	196	28	529966
1144	28.4	8.8	7.6	chr10	105030133	105030595	(28766827)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	73	531661
2289	12.1	0.0	0.0	chr10	105030596	105030892	(28766530)	C	AluSq2	SINE/Alu	(16)	297	1	531662
1226	27.5	11.4	7.2	chr10	106585565	106586074	(27211348)	+	MLT1H	LTR/ERVL-MaLR	6	539	(10)	533928
353	28.9	0.9	0.0	chr10	106586204	106586307	(27211115)	C	MER94	DNA/hAT-Blackjack	(0)	134	30	533929
894	27.4	10.6	5.4	chr10	113363451	113363951	(20433471)	+	MLT1H	LTR/ERVL-MaLR	17	546	(3)	544192
369	32.2	0.8	1.6	chr10	116530592	116530714	(17266708)	C	L2a	LINE/L2	(0)	3426	3305	548920
1002	28.8	6.5	1.7	chr10	116530763	116531246	(17266176)	C	MLT1H	LTR/ERVL-MaLR	(5)	574	6	548921
13	23.4	5.8	2.4	chr10	117137134	117137195	(16660227)	+	G-rich	Low_complexity	1	64	(0)	549930
569	21.1	8.4	2.6	chr10	117654064	117654219	(16143203)	C	MIR3	SINE/MIR	(6)	202	37	550825
1011	22.7	6.3	10.5	chr10	117654242	117654659	(16142763)	C	MLT1H2	LTR/ERVL-MaLR	(6)	483	85	550826
12	24.2	3.5	3.4	chr10	118046682	118046695	(15750727)	+	(CTCCCT)n	Simple_repeat	1	57	(0)	551476
17	11.8	2.4	4.8	chr10	118046696	118046736	(15750686)	+	(CCT)n	Simple_repeat	1	42	(0)	551477
193	18.6	18.9	1.1	chr10	118047180	118047266	(15750156)	+	L2b	LINE/L2	3266	3371	(4)	551478
1056	27.7	2.3	5.8	chr10	118916689	118917048	(14880374)	+	MLT1H	LTR/ERVL-MaLR	8	354	(195)	552836
1989	14.7	1.3	1.9	chr10	118917086	118917274	(14880148)	C	AluJr	SINE/Alu	(0)	312	128	552837
31	6.1	5.9	0.0	chr10	118917275	118917325	(14880097)	+	(AT)n	Simple_repeat	1	54	(0)	552838
301	34.1	10.5	3.4	chr10	119290644	119290907	(14506515)	+	L2c	LINE/L2	3056	3340	(47)	553627
18	25.7	0.0	0.0	chr10	123008737	123008784	(10788638)	+	(GCC)n	Simple_repeat	1	48	(0)	559613
2481	17.3	11.2	3.4	chr10	124392747	124393675	(9403747)	C	LTR27B	LTR/ERV1	(88)	1041	1	561822
365	29.8	3.0	3.0	chr10	124393876	124394010	(9403412)	C	MIRb	SINE/MIR	(8)	260	126	561823
252	28.7	13.4	5.6	chr10	128972980	128973123	(4824299)	+	MIRb	SINE/MIR	53	209	(59)	568011
309	32.7	5.7	1.0	chr10	130111778	130111978	(3685444)	+	MLT1L	LTR/ERVL-MaLR	177	387	(223)	569113
16	6.3	9.1	0.0	chr10	133160349	133160381	(637041)	+	(GGCG)n	Simple_repeat	1	36	(0)	572212
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
19	26.1	2.1	5.2	chr11	506892	506986	(134579636)	+	(CGCCC)n	Simple_repeat	1	97	(0)	573470
2400	5.8	0.3	0.3	chr11	518188	518481	(134568141)	C	AluY	SINE/Alu	(17)	294	1	573498
936	9.4	3.0	0.0	chr11	518496	518622	(134568000)	C	AluSx3	SINE/Alu	(180)	131	1	573499
452	27.1	4.4	4.8	chr11	746779	746843	(134339779)	+	L1M5	LINE/L1	5228	5290	(856)	573881
18	6.2	2.5	7.3	chr11	747424	747463	(134339159)	+	(GCC)n	Simple_repeat	1	41	(0)	573885
121	12.7	7.5	1.9	chr11	1389655	1389947	(133696675)	+	(GGCTC)n	Simple_repeat	1	315	(0)	574575
18	10.9	3.4	8.2	chr11	1389939	1389997	(133696625)	+	G-rich	Low_complexity	1	61	(0)	574576
29	0.0	0.0	0.0	chr11	1390001	1390027	(133696595)	+	(CGG)n	Simple_repeat	1	27	(0)	574577
102	29.3	1.0	0.9	chr11	1446015	1446046	(133640576)	+	G-rich	Low_complexity	1	31	(0)	574615
100	9.2	0.0	1.3	chr11	1446047	1446201	(133640421)	+	(GCTGG)n	Simple_repeat	1	155	(0)	574616
102	29.3	1.0	0.9	chr11	1446202	1446480	(133640142)	+	G-rich	Low_complexity	32	312	(0)	574617
15	9.2	8.6	0.0	chr11	1572032	1572066	(133514556)	+	(CGTCGC)n	Simple_repeat	1	38	(0)	574743
36	0.0	0.0	0.0	chr11	1572177	1572209	(133514413)	+	(GGCTCG)n	Simple_repeat	1	33	(0)	574744
14	12.8	1.9	9.4	chr11	1763729	1763780	(133322842)	+	(GGCCCC)n	Simple_repeat	1	53	(0)	575049
226	30.7	4.2	3.4	chr11	1863438	1863555	(133223067)	+	MIRb	SINE/MIR	46	164	(66)	575190
182	16.3	0.3	0.0	chr11	1987225	1987545	(133099077)	+	(GCTGG)n	Simple_repeat	1	322	(0)	575307
13	14.7	11.1	0.0	chr11	2269165	2269209	(132817413)	+	G-rich	Low_complexity	1	50	(0)	575605
13	12.0	0.0	3.5	chr11	2269471	2269499	(132817123)	+	(CCCCT)n	Simple_repeat	1	29	(0)	575606
3276	15.6	7.0	0.5	chr11	4138996	4139340	(130947282)	C	L1MB4	LINE/L1	(8)	6670	6294	578434
1799	14.4	3.7	4.0	chr11	4139341	4139639	(130946983)	C	AluSz6	SINE/Alu	(12)	300	3	578435
255	27.8	11.3	4.3	chr11	4607619	4607757	(130478865)	+	HAL1ME	LINE/L1	2358	2507	(0)	578969
1429	10.3	3.9	0.0	chr11	8687196	8687390	(126399232)	+	AluSp	SINE/Alu	79	281	(32)	584342
18	19.1	3.5	3.4	chr11	10294071	10294127	(124792495)	+	(GCC)n	Simple_repeat	1	59	(0)	587321
16	12.7	6.7	2.1	chr11	10792708	10792752	(124293870)	+	G-rich	Low_complexity	1	48	(0)	588141
218	23.5	0.0	0.0	chr11	13352799	13352849	(121733773)	C	MIR3	SINE/MIR	(58)	150	100	592253
1703	12.0	1.6	0.8	chr11	13353208	13353450	(121733172)	+	7SK	RNA	1	245	(86)	592254
27	20.0	2.8	1.4	chr11	16606190	16606263	(118480359)	+	(TTTCTTT)n	Simple_repeat	1	75	(0)	597232
15	19.4	3.5	5.0	chr11	17276711	17276768	(117809854)	+	(GGCG)n	Simple_repeat	1	60	(0)	598473
395	23.2	8.1	1.5	chr11	22544537	22544700	(112541922)	+	MLT1H	LTR/ERVL-MaLR	6	158	(286)	607132
309	25.7	0.0	0.0	chr11	22544701	22544770	(112541852)	C	MER96	DNA/hAT-Tip100	(3)	172	103	607133
198	28.6	7.7	4.5	chr11	22545096	22545183	(112541439)	+	L2c	LINE/L2	3281	3371	(16)	607130
63	6.8	0.0	0.0	chr11	27472969	27473046	(107613576)	+	(GGT)n	Simple_repeat	1	78	(0)	613999
276	25.6	5.7	8.9	chr11	30914393	30914538	(104172084)	C	Charlie4z	DNA/hAT-Charlie	(3)	164	24	619236
13	16.8	0.0	5.4	chr11	31811725	31811761	(103274861)	+	(CCGCC)n	Simple_repeat	1	37	(0)	620441
13	23.9	4.3	4.2	chr11	31811874	31811942	(103274680)	+	(GCCGAG)n	Simple_repeat	1	72	(0)	620442
321	21.4	8.9	0.0	chr11	31982035	31982146	(103104476)	+	L1ME3E	LINE/L1	5890	6012	(230)	620756
993	26.2	9.6	4.5	chr11	31982244	31982579	(103104043)	C	MLT1H	LTR/ERVL-MaLR	(194)	355	1	620757
266	27.1	8.6	1.2	chr11	32299193	32299278	(102787344)	+	MIRb	SINE/MIR	35	127	(141)	621343
245	6.9	0.0	0.0	chr11	32299327	32299355	(102787267)	C	L4_A_Mam	LINE/RTE-X	(18)	4972	4944	621344
2703	9.1	0.8	1.1	chr11	32299462	32299837	(102786785)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	621345
19	24.2	1.5	2.9	chr11	33016057	33016123	(102070499)	+	(GGCGTGC)n	Simple_repeat	1	68	(0)	622659
820	26.8	9.5	5.1	chr11	35028899	35029291	(100057331)	C	MLT1H	LTR/ERVL-MaLR	(128)	421	10	626151
885	24.5	32.2	1.9	chr11	35088325	35088694	(99997928)	+	MLT1H	LTR/ERVL-MaLR	53	540	(9)	626234
718	28.4	6.8	5.5	chr11	35088727	35089088	(99997534)	+	LTR88b	LTR/Gypsy?	4	370	(467)	626235
1492	27.6	10.3	4.3	chr11	35234900	35235410	(99851212)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	5	626443
406	28.6	15.2	5.7	chr11	44095044	44095444	(90991178)	C	L1ME4b	LINE/L1	(2138)	5744	5554	639565
859	26.2	7.9	9.9	chr11	44498607	44499032	(90587590)	C	MLT1H	LTR/ERVL-MaLR	(13)	536	84	640234
22	21.3	3.3	5.4	chr11	45180659	45180748	(89905874)	+	G-rich	Low_complexity	1	93	(0)	641656
2017	16.9	0.0	0.0	chr11	45529829	45530124	(89556498)	+	AluJb	SINE/Alu	3	298	(14)	642295
815	27.5	9.4	8.3	chr11	45530125	45530479	(89556143)	+	MLT1H2	LTR/ERVL-MaLR	127	489	(0)	642294
742	20.8	6.2	7.1	chr11	45530480	45530582	(89556040)	C	MIR	SINE/MIR	(151)	111	1	642293
2179	13.7	6.9	1.8	chr11	45735993	45736335	(89350287)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	642650
423	27.7	12.8	4.3	chr11	45736336	45736358	(89350264)	C	MIRb	SINE/MIR	(240)	28	10	642649
643	25.7	19.4	3.2	chr11	45736388	45736829	(89349793)	C	MLT1H	LTR/ERVL-MaLR	(18)	531	1	642651
373	30.7	4.5	0.8	chr11	45736830	45736957	(89349665)	+	MIRb	SINE/MIR	93	225	(43)	642652
2298	9.3	2.0	0.3	chr11	45792380	45792552	(89294070)	+	AluSx	SINE/Alu	135	307	(5)	642779
1029	21.4	19.8	4.5	chr11	45792553	45792754	(89293868)	+	MLT1H	LTR/ERVL-MaLR	264	547	(2)	642778
2279	6.0	4.4	0.0	chr11	46699890	46700171	(88386451)	+	AluSq4	SINE/Alu	1	295	(16)	644466
16	8.0	0.0	3.5	chr11	46826822	46826850	(88259772)	+	(CGG)n	Simple_repeat	1	29	(0)	644711
31	0.0	3.0	0.0	chr11	47408554	47408586	(87678036)	+	(GGCCGGGC)n	Simple_repeat	1	34	(0)	645844
14	0.0	0.0	0.0	chr11	47408642	47408659	(87677963)	+	(CGC)n	Simple_repeat	1	18	(0)	645845
12	9.8	0.0	0.0	chr11	47593975	47593996	(87492626)	+	(CCAT)n	Simple_repeat	1	22	(0)	646235
38	7.1	1.6	1.6	chr11	47594196	47594256	(87492366)	+	(GGCTGCG)n	Simple_repeat	1	62	(0)	646236
194	27.5	12.5	1.1	chr11	47594515	47594606	(87492016)	C	MIRc	SINE/MIR	(50)	218	115	646237
12	14.4	0.0	0.0	chr11	47642477	47642500	(87444122)	+	(CGGA)n	Simple_repeat	1	24	(0)	646353
17	20.9	2.7	6.5	chr11	47642561	47642635	(87443987)	+	(GCCC)n	Simple_repeat	1	77	(0)	646354
838	26.6	15.3	2.6	chr11	59188092	59188658	(75897964)	C	L2a	LINE/L2	(1)	3425	2767	656465
12	7.5	16.7	0.0	chr11	59615393	59615434	(75471188)	+	(CGAGCC)n	Simple_repeat	1	49	(0)	657081
353	27.9	7.2	5.5	chr11	61390878	61391040	(73695582)	+	LTR33	LTR/ERVL	45	210	(305)	660080
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
2469	9.0	0.0	0.3	chr11	62311415	62311726	(72774896)	+	AluSq10	SINE/Alu	1	311	(2)	661814
13	17.4	4.9	2.3	chr11	62881265	62881305	(72205317)	+	(GCTCG)n	Simple_repeat	1	43	(0)	663030
12	15.8	0.0	3.3	chr11	63763345	63763374	(71323248)	+	G-rich	Low_complexity	1	30	(0)	664331
18	7.7	0.0	0.0	chr11	63763374	63763401	(71323221)	+	(CCGAC)n	Simple_repeat	1	28	(0)	664332
607	28.4	11.1	5.6	chr11	64566262	64566715	(70519907)	C	Tigger18a	DNA/TcMar-Tigger	(100)	752	260	665872
414	26.2	3.9	3.9	chr11	65054845	65054999	(70031623)	+	L1MC	LINE/L1	5666	5820	(2062)	666770
1954	14.9	5.2	5.0	chr11	65055005	65055119	(70031503)	+	L1MB4	LINE/L1	5685	5797	(383)	666771
2073	10.0	0.0	11.2	chr11	65055120	65055468	(70031154)	+	AluSx	SINE/Alu	1	310	(2)	666772
11	28.4	0.0	0.0	chr11	66479958	66479996	(68606626)	+	(CAAGTCC)n	Simple_repeat	1	39	(0)	669605
2214	12.1	0.0	1.3	chr11	66814257	66814562	(68272060)	C	AluSx1	SINE/Alu	(10)	302	1	670310
33	0.0	0.0	0.0	chr11	67372617	67372647	(67713975)	+	(GGCGGG)n	Simple_repeat	1	31	(0)	671512
15	21.8	0.0	4.3	chr11	67372841	67372886	(67713736)	+	(CGC)n	Simple_repeat	1	46	(0)	671513
22	18.1	2.0	0.0	chr11	67372944	67372993	(67713629)	+	(CGGCC)n	Simple_repeat	1	51	(0)	671514
17	22.7	3.5	1.7	chr11	67372991	67373048	(67713574)	+	(CCCT)n	Simple_repeat	1	60	(0)	671515
18	25.0	3.5	4.4	chr11	67373349	67373435	(67713187)	+	(GCCCG)n	Simple_repeat	1	90	(0)	671516
15	22.5	0.0	4.0	chr11	67373395	67373444	(67713178)	+	(CCCCGG)n	Simple_repeat	1	50	(0)	671517
2276	10.5	0.6	1.0	chr11	68029829	68030141	(67056481)	+	AluJb	SINE/Alu	1	312	(0)	672648
293	31.0	9.2	4.5	chr11	68030158	68030333	(67056289)	+	MIR	SINE/MIR	8	192	(70)	672649
1748	15.4	5.8	2.3	chr11	68492149	68492447	(66594175)	C	AluJr	SINE/Alu	(1)	311	2	673530
2619	16.6	6.3	1.4	chr11	68492448	68492777	(66593845)	C	L1MB3	LINE/L1	(352)	5831	5488	673528
14	29.9	0.0	0.0	chr11	69180854	69180902	(65905720)	+	G-rich	Low_complexity	1	49	(0)	674652
2259	12.8	0.0	0.6	chr11	69181021	69181333	(65905289)	C	AluSx1	SINE/Alu	(1)	311	1	674653
12	15.9	5.7	0.0	chr11	72752365	72752399	(62334223)	+	(ACCGCC)n	Simple_repeat	1	37	(0)	680518
16	18.0	0.0	2.5	chr11	72752465	72752504	(62334118)	+	G-rich	Low_complexity	1	40	(0)	680519
15	22.6	3.3	3.2	chr11	74493319	74493378	(60593244)	+	(GCACGC)n	Simple_repeat	1	62	(0)	684201
545	24.9	7.0	6.1	chr11	74493875	74494088	(60592534)	C	L2a	LINE/L2	(5)	3421	3206	684202
17	23.6	5.6	1.3	chr11	76783061	76783131	(58303491)	+	G-rich	Low_complexity	1	75	(0)	688674
11	14.1	10.3	0.0	chr11	76783236	76783274	(58303348)	+	(CGCCCGG)n	Simple_repeat	1	43	(0)	688675
588	16.3	0.0	0.0	chr11	76823449	76823540	(58263082)	C	AluJb	SINE/Alu	(13)	299	208	688740
16	17.7	1.7	6.8	chr11	76860858	76860921	(58225701)	+	(GGCCG)n	Simple_repeat	1	60	(0)	688820
16	13.1	0.0	5.4	chr11	76860956	76860992	(58225630)	+	(GGC)n	Simple_repeat	1	37	(0)	688821
16	6.7	0.0	8.1	chr11	77066885	77066921	(58019701)	+	(GGGCG)n	Simple_repeat	1	37	(0)	689201
24	20.6	0.0	1.9	chr11	77067118	77067169	(58019453)	+	(GT)n	Simple_repeat	1	52	(0)	689202
2216	13.9	5.5	1.7	chr11	77790100	77790449	(57296173)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	690605
12034	8.8	3.0	0.8	chr11	77790452	77791994	(57294628)	C	THE1B-int	LTR/ERVL-MaLR	(2)	1578	1	690606
1169	29.7	9.0	4.8	chr11	82631673	82632065	(52454557)	+	MLT1H	LTR/ERVL-MaLR	130	548	(1)	699190
543	27.2	3.2	7.2	chr11	82900866	82901127	(52185495)	C	MIRb	SINE/MIR	(3)	265	15	699672
2648	8.9	1.4	0.0	chr11	90128772	90129121	(44957501)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	711024
18	7.6	0.0	0.0	chr11	94543836	94543863	(40542759)	+	(CTCC)n	Simple_repeat	1	28	(0)	717311
15	20.5	0.0	2.4	chr11	94544397	94544437	(40542185)	+	(CAGCGG)n	Simple_repeat	1	41	(0)	717312
15	25.8	0.0	3.7	chr11	94544528	94544581	(40542041)	+	(CGG)n	Simple_repeat	1	54	(0)	717313
16	23.0	3.9	0.0	chr11	95089758	95089808	(39996814)	+	(CCCGC)n	Simple_repeat	1	53	(0)	718109
2220	4.9	0.0	2.3	chr11	99358108	99358371	(35728251)	C	AluYm1	SINE/Alu	(31)	280	23	723699
1398	12.1	2.5	0.0	chr11	99358387	99358585	(35728037)	+	AluSc	SINE/Alu	102	305	(4)	723700
15	31.9	3.6	1.2	chr11	100687100	100687182	(34399440)	+	(GCGG)n	Simple_repeat	1	86	(0)	725359
14	7.1	2.9	5.7	chr11	100687445	100687478	(34399144)	+	(CGCGCC)n	Simple_repeat	1	35	(0)	725360
1670	9.9	2.1	0.4	chr11	100839631	100839863	(34246759)	+	7SK	RNA	2	238	(93)	725600
3725	14.3	4.6	3.4	chr11	102431276	102431730	(32654892)	C	L1MA8	LINE/L1	(10)	6281	5728	727927
2146	13.6	8.5	0.6	chr11	102431731	102432078	(32654544)	+	THE1D	LTR/ERVL-MaLR	1	378	(3)	727928
18	12.6	2.0	6.0	chr11	103091453	103091501	(31995121)	+	G-rich	Low_complexity	1	50	(0)	728980
2078	10.7	6.3	1.6	chr11	104063538	104063900	(31022722)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	730302
2096	13.9	0.3	1.6	chr11	109304917	109305226	(25781396)	C	AluSz	SINE/Alu	(6)	306	1	738136
17	14.4	0.0	4.8	chr11	110092915	110092956	(24993666)	+	(GCGG)n	Simple_repeat	1	42	(0)	739265
445	27.9	7.9	0.0	chr11	110505471	110505610	(24581012)	C	MIR	SINE/MIR	(105)	157	6	739955
2236	12.6	2.4	2.4	chr11	110895846	110896226	(24190396)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	740520
390	34.7	12.1	5.0	chr11	110896227	110896853	(24189769)	+	L2c	LINE/L2	1605	2287	(1132)	740519
16	17.8	7.2	4.0	chr11	111871300	111871377	(23215245)	+	(CGCCG)n	Simple_repeat	1	80	(0)	742108
1950	23.1	6.6	7.1	chr11	112898357	112898906	(22187716)	+	MLT1H	LTR/ERVL-MaLR	3	549	(0)	743824
426	24.4	6.5	0.9	chr11	113476561	113476693	(21609929)	C	MIR3	SINE/MIR	(4)	204	68	744602
470	30.7	9.4	6.3	chr11	114017737	114017978	(21068644)	+	L2	LINE/L2	2823	3073	(346)	745599
469	22.8	3.1	0.8	chr11	114017983	114018106	(21068516)	+	LTR86C	LTR/ERVL	2	128	(493)	745601
715	26.9	10.5	8.3	chr11	115889011	115889578	(19197044)	+	HAL1	LINE/L1	610	1191	(1316)	748370
485	27.8	2.8	1.5	chr11	115889588	115889782	(19196840)	C	MIRb	SINE/MIR	(49)	213	20	748371
384	24.2	18.1	11.2	chr11	116654917	116655237	(18431385)	+	MLT1I	LTR/ERVL-MaLR	64	411	(0)	749714
497	34.1	10.6	2.2	chr11	116655242	116655517	(18431105)	+	L2c	LINE/L2	3086	3387	(0)	749713
2854	8.1	1.1	0.8	chr11	121006201	121006574	(14080048)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	757536
17	14.9	2.7	0.0	chr11	121427324	121427360	(13659262)	+	(CCCGG)n	Simple_repeat	1	38	(0)	758099
184	29.6	11.7	3.6	chr11	121427459	121427623	(13658999)	+	L2b	LINE/L2	3190	3369	(57)	758093
18890	17.3	5.5	2.3	chr11	124981921	124984944	(10101678)	C	L1PA15	LINE/L1	(3629)	3137	13	763844
17	12.7	0.0	5.3	chr11	126062657	126062694	(9023928)	+	(GCG)n	Simple_repeat	1	38	(0)	765434
12	12.0	0.0	6.5	chr11	126062757	126062787	(9023835)	+	G-rich	Low_complexity	1	31	(0)	765435
2208	11.0	0.0	0.0	chr11	126300663	126300944	(8785678)	C	AluSz	SINE/Alu	(26)	286	5	765854
560	31.9	4.5	6.1	chr11	126300945	126301122	(8785500)	+	L2a	LINE/L2	2998	3174	(252)	765853
2184	13.0	2.0	0.0	chr11	126301129	126301420	(8785202)	+	AluSx	SINE/Alu	1	298	(14)	765855
12	23.7	3.4	3.3	chr11	130428193	130428217	(4658405)	+	G-rich	Low_complexity	1	25	(0)	771901
27	3.5	0.0	0.0	chr11	130428218	130428247	(4658375)	+	(CAG)n	Simple_repeat	1	30	(0)	771902
12	23.7	3.4	3.3	chr11	130428248	130428280	(4658342)	+	G-rich	Low_complexity	26	58	(0)	771903
204	25.9	0.0	1.8	chr11	134044870	134044924	(1041698)	+	MIR3	SINE/MIR	153	206	(2)	776707
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
1406	15.6	10.0	0.0	chr12	1731064	1731307	(131544002)	C	AluJo	SINE/Alu	(13)	299	29	781184
1665	17.4	6.3	0.6	chr12	1731332	1731677	(131543632)	C	L1MB4	LINE/L1	(0)	6180	5814	781185
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
385	27.5	4.2	2.8	chr12	2345301	2345442	(130929867)	+	MamRep38	DNA/hAT	98	241	(54)	782072
626	29.5	3.5	2.0	chr12	2345466	2345662	(130929647)	C	MIR	SINE/MIR	(49)	213	14	782073
15	10.8	3.3	0.0	chr12	4031250	4031279	(129244030)	+	(CCGC)n	Simple_repeat	1	31	(0)	784812
12	29.7	0.0	2.1	chr12	4031354	4031401	(129243908)	+	(GCGCT)n	Simple_repeat	1	48	(0)	784813
344	33.0	6.3	2.7	chr12	5454865	5455048	(127820261)	+	MIR3	SINE/MIR	3	193	(15)	787057
14	10.2	11.9	0.0	chr12	6700527	6700575	(126574734)	+	(GGAGGCGCA)n	Simple_repeat	1	54	(0)	789193
36	6.7	0.0	0.0	chr12	6700787	6700833	(126574476)	+	(GCTCG)n	Simple_repeat	1	47	(0)	789194
12	22.6	1.9	5.7	chr12	8032653	8032704	(125242605)	+	GA-rich	Low_complexity	1	53	(0)	791667
19	7.8	0.0	10.0	chr12	8032704	8032753	(125242556)	+	(GAGCC)n	Simple_repeat	1	50	(0)	791668
15	21.4	1.6	6.3	chr12	8697834	8697897	(124577412)	+	(CGCCG)n	Simple_repeat	1	60	(0)	792746
12	33.2	0.0	1.7	chr12	8698023	8698080	(124577229)	+	G-rich	Low_complexity	1	58	(0)	792747
13	20.7	5.8	1.8	chr12	8698397	8698448	(124576861)	+	G-rich	Low_complexity	1	55	(0)	792748
18	12.0	2.8	0.0	chr12	12600742	12600777	(120674532)	+	(AACAC)n	Simple_repeat	1	37	(0)	798422
16	10.4	0.0	5.7	chr12	15882461	15882495	(117392814)	+	(CCCT)n	Simple_repeat	1	35	(0)	803443
310	32.0	10.2	0.7	chr12	16369116	16369266	(116906043)	+	MIRc	SINE/MIR	2	168	(100)	804198
661	31.2	5.2	11.9	chr12	16369347	16369532	(116905777)	C	MLT1H	LTR/ERVL-MaLR	(127)	422	282	804199
850	27.9	0.9	3.5	chr12	16369533	16369762	(116905547)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	804200
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
2340	8.6	0.7	1.0	chr12	19149231	19149533	(114125776)	+	AluY	SINE/Alu	10	311	(0)	807620
1610	26.0	6.1	4.5	chr12	19149534	19150028	(114125281)	C	MLT1H	LTR/ERVL-MaLR	(37)	512	6	807619
12	10.0	5.6	5.3	chr12	22544213	22544248	(110731061)	+	G-rich	Low_complexity	1	38	(0)	812278
16	13.3	2.7	5.3	chr12	22544266	22544302	(110731007)	+	(GC)n	Simple_repeat	1	38	(0)	812279
713	16.8	5.1	1.5	chr12	22639216	22639346	(110635963)	C	AluSz	SINE/Alu	(176)	136	1	812464
609	21.2	19.3	4.6	chr12	22639353	22639394	(110635915)	C	L1MC5a	LINE/L1	(562)	2215	2177	812463
2285	9.7	1.4	0.0	chr12	22639395	22639683	(110635626)	+	AluSx1	SINE/Alu	1	293	(19)	812465
37	15.3	0.0	0.0	chr12	25250861	25250926	(108024383)	+	(GCC)n	Simple_repeat	1	66	(0)	816204
19	23.4	5.6	3.2	chr12	25251107	25251196	(108024113)	+	G-rich	Low_complexity	1	95	(0)	816205
1235	16.1	3.5	0.5	chr12	25779346	25779569	(107495740)	C	7SK	RNA	(100)	231	1	816973
1013	34.4	7.3	5.4	chr12	30002341	30002723	(103272586)	C	MER115	DNA/hAT-Tip100	(9)	684	272	823136
2149	13.9	2.1	2.1	chr12	30002724	30003098	(103272211)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	823137
1630	24.1	4.4	3.1	chr12	30565340	30565828	(102709481)	+	L2a	LINE/L2	1662	2157	(1262)	823868
501	28.1	5.7	10.3	chr12	30565858	30566329	(102708980)	C	MLT1H	LTR/ERVL-MaLR	(19)	470	1	823869
14	18.5	2.6	2.5	chr12	30754859	30754897	(102520412)	+	(CTC)n	Simple_repeat	1	40	(0)	824129
300	35.0	6.2	6.9	chr12	30755000	30755260	(102520049)	+	L1M4b	LINE/L1	291	549	(6318)	824130
13	11.2	3.2	3.1	chr12	32679264	32679294	(100596015)	+	GA-rich	Low_complexity	1	32	(0)	827925
16	23.9	0.0	0.0	chr12	32679526	32679569	(100595740)	+	(GCGCCC)n	Simple_repeat	1	44	(0)	827926
295	34.3	0.7	0.0	chr12	32795836	32795975	(100479334)	+	Plat_L3	LINE/CR1	3406	3546	(40)	828150
281	27.0	15.3	4.3	chr12	38139032	38139147	(95136162)	C	AluJb	SINE/Alu	(0)	302	172	830734
675	16.5	0.0	0.9	chr12	38139148	38139256	(95136053)	+	AluJb	SINE/Alu	180	287	(25)	830735
16	14.8	0.0	4.9	chr12	42144371	42144411	(91130898)	+	(CCCGCGC)n	Simple_repeat	1	41	(0)	836070
13	18.9	0.0	0.0	chr12	45216357	45216386	(88058923)	+	GA-rich	Low_complexity	1	30	(0)	840513
14	7.2	0.0	8.6	chr12	49019846	49019880	(84255429)	+	A-rich	Low_complexity	1	35	(0)	846268
15	8.3	7.1	4.4	chr12	49673750	49673791	(83601518)	+	(CCAGC)n	Simple_repeat	1	45	(0)	847574
12	14.0	7.3	2.3	chr12	50167052	50167092	(83108217)	+	(GCCCCCG)n	Simple_repeat	1	44	(0)	848566
1828	14.3	6.1	0.6	chr12	50842484	50842841	(82432468)	C	MER31A	LTR/ERV1	(0)	485	107	850117
200	28.0	9.6	1.3	chr12	50843343	50843418	(82431891)	C	MIRb	SINE/MIR	(70)	198	116	850118
12	25.6	0.0	6.9	chr12	51217577	51217634	(82057675)	+	(CCGCC)n	Simple_repeat	1	58	(0)	850860
20	15.0	0.0	4.2	chr12	51217710	51217757	(82057552)	+	G-rich	Low_complexity	1	48	(0)	850861
15	11.7	0.0	0.0	chr12	51217780	51217807	(82057502)	+	(CGGCT)n	Simple_repeat	1	28	(0)	850862
14	16.4	2.9	0.0	chr12	52033165	52033198	(81242111)	+	(CCCCG)n	Simple_repeat	1	35	(0)	852344
17	24.4	0.0	4.8	chr12	53180926	53180988	(80094321)	+	G-rich	Low_complexity	1	63	(0)	854225
2292	10.7	0.0	0.7	chr12	53250848	53251157	(80024152)	C	AluSx1	SINE/Alu	(4)	308	1	854340
680	28.2	11.0	6.6	chr12	53251158	53251415	(80023894)	C	L2a	LINE/L2	(284)	3142	2831	854337
68	0.0	0.0	0.0	chr12	54008827	54008884	(79266425)	+	(TC)n	Simple_repeat	1	58	(0)	855746
39	0.0	0.0	6.1	chr12	54009025	54009073	(79266236)	+	(CGC)n	Simple_repeat	1	49	(0)	855747
16	16.7	4.3	6.9	chr12	54009103	54009171	(79266138)	+	(CCAGC)n	Simple_repeat	1	72	(0)	855748
14	24.0	0.0	0.0	chr12	54034186	54034224	(79241085)	+	G-rich	Low_complexity	1	39	(0)	855769
20	22.0	3.0	2.9	chr12	54054256	54054322	(79220987)	+	(CCAG)n	Simple_repeat	1	69	(0)	855785
40	0.0	0.0	0.0	chr12	54079823	54079856	(79195453)	+	(TG)n	Simple_repeat	1	34	(0)	855832
17	23.1	0.0	3.7	chr12	57088847	57088900	(76186409)	+	(CCCCTC)n	Simple_repeat	1	54	(0)	860680
31	12.4	0.0	5.8	chr12	57088942	57089010	(76186299)	+	(CGCCCC)n	Simple_repeat	1	69	(0)	860681
29	0.0	0.0	0.0	chr12	57772207	57772234	(75503075)	+	(GCTGG)n	Simple_repeat	1	28	(0)	861800
386	22.5	0.0	2.9	chr12	62466227	62466331	(70808978)	C	L2a	LINE/L2	(486)	2933	2832	867970
239	14.8	16.9	0.0	chr12	64662940	64662993	(68612316)	+	MIR	SINE/MIR	196	260	(2)	871582
20	22.8	0.0	7.3	chr12	66302344	66302425	(66972884)	+	(CCCCT)n	Simple_repeat	1	82	(0)	874171
24	19.3	0.0	0.0	chr12	68808591	68808643	(64466666)	+	(GGCTCGG)n	Simple_repeat	1	53	(0)	878136
19	6.1	5.7	0.0	chr12	69738825	69738859	(63536450)	+	(GCTCCCG)n	Simple_repeat	1	37	(0)	879832
18	18.5	8.2	0.0	chr12	69738860	69738884	(63536425)	+	(CGCTCCCG)n	Simple_repeat	2	66	(0)	879833
2579	9.0	2.2	0.6	chr12	76779277	76779634	(56495675)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	889847
3659	16.8	7.7	2.3	chr12	76779635	76780355	(56494954)	C	L1MD1	LINE/L1	(953)	5193	4427	889843
12	19.5	7.1	3.3	chr12	77324876	77324931	(55950378)	+	(CGCGCT)n	Simple_repeat	1	60	(0)	890694
16	12.1	11.1	0.0	chr12	77324940	77324984	(55950325)	+	(GGC)n	Simple_repeat	1	50	(0)	890695
18	15.6	0.0	0.0	chr12	77325016	77325051	(55950258)	+	(CCGCTC)n	Simple_repeat	1	36	(0)	890696
226	32.3	10.3	3.0	chr12	80163375	80163508	(53111801)	C	MIR3	SINE/MIR	(7)	201	57	894621
543	33.0	9.1	5.2	chr12	80163668	80163993	(53111316)	C	MLT1H	LTR/ERVL-MaLR	(209)	340	1	894622
28	0.0	0.0	0.0	chr12	80343510	80343536	(52931773)	+	(T)n	Simple_repeat	1	27	(0)	894882
1457	13.8	2.1	0.4	chr12	80343559	80343791	(52931518)	C	7SK	RNA	(93)	238	2	894883
379	16.2	0.0	8.6	chr12	80343794	80343874	(52931435)	C	MER2	DNA/TcMar-Tigger	(271)	74	1	894881
12	14.1	3.0	2.9	chr12	80343946	80343978	(52931331)	+	GA-rich	Low_complexity	1	34	(0)	894884
309	24.6	0.0	0.0	chr12	80344054	80344118	(52931191)	+	Charlie16a	DNA/hAT-Charlie	58	122	(220)	894885
350	30.7	6.0	6.9	chr12	81748469	81748671	(51526638)	+	MLT1H	LTR/ERVL-MaLR	222	422	(127)	896815
618	27.8	3.8	4.1	chr12	81801192	81801457	(51473852)	+	L1M6	LINE/L1	613	877	(5619)	896881
280	29.6	2.9	2.2	chr12	92021580	92021714	(41253595)	+	HAL1ME	LINE/L1	89	224	(2241)	910779
315	38.2	4.4	0.0	chr12	92021769	92021899	(41253410)	+	HAL1ME	LINE/L1	312	448	(2017)	910779
4437	21.3	5.6	1.0	chr12	92331698	92332689	(40942620)	C	MER45B	DNA/hAT-Tip100	(0)	1040	1	911366
12	15.8	0.0	3.3	chr12	93441908	93441937	(39833372)	+	(TCTCG)n	Simple_repeat	1	30	(0)	913432
14	15.9	0.0	0.0	chr12	93441980	93442007	(39833302)	+	(GCC)n	Simple_repeat	1	28	(0)	913433
15	27.2	0.0	2.0	chr12	93442319	93442369	(39832940)	+	(CATT)n	Simple_repeat	1	51	(0)	913434
229	36.9	5.4	1.7	chr12	94101215	94101393	(39173916)	+	Tigger19a	DNA/TcMar-Tigger	27	212	(111)	914667
13	8.1	3.6	3.5	chr12	95474285	95474312	(37800997)	+	GA-rich	Low_complexity	1	29	(0)	917299
351	28.5	0.0	9.6	chr12	99951398	99951564	(33323745)	C	MLT1H	LTR/ERVL-MaLR	(17)	532	382	924612
1546	17.9	1.1	4.3	chr12	99951599	99951878	(33323431)	+	AluJr	SINE/Alu	7	277	(35)	924613
395	29.5	11.3	6.0	chr12	100752910	100753309	(32522000)	C	MLT1H	LTR/ERVL-MaLR	(103)	446	23	926129
1470	23.3	10.3	3.5	chr12	101266943	101267338	(32007971)	+	MLT1H	LTR/ERVL-MaLR	1	426	(123)	926922
421	20.7	0.0	0.0	chr12	101267537	101267618	(32007691)	C	MLT1K	LTR/ERVL-MaLR	(21)	574	493	926923
449	31.8	7.8	14.8	chr12	101282215	101283219	(31992090)	C	L2b	LINE/L2	(177)	3210	2255	926961
855	24.8	2.7	9.2	chr12	101283240	101283554	(31991755)	C	MLT1H	LTR/ERVL-MaLR	(203)	346	53	926962
14	20.4	3.9	7.4	chr12	101697808	101697885	(31577424)	+	(CCAGGCG)n	Simple_repeat	1	81	(0)	927780
1586	22.9	12.4	3.3	chr12	103047591	103048078	(30227231)	C	MLT1H	LTR/ERVL-MaLR	(8)	541	3	930055
461	29.4	5.3	2.0	chr12	104507401	104507546	(28767763)	+	MIR	SINE/MIR	13	163	(99)	932724
606	27.7	9.3	6.8	chr12	104507624	104507991	(28767318)	C	MLT1H	LTR/ERVL-MaLR	(169)	380	3	932725
12	10.6	9.1	4.2	chr12	105236161	105236204	(28039105)	+	(GGCC)n	Simple_repeat	1	48	(0)	934031
1283	27.5	10.7	0.7	chr12	105474305	105474977	(27800332)	C	L2a	LINE/L2	(1)	3425	2665	934450
1376	19.1	0.0	5.5	chr12	105475111	105475383	(27799926)	+	AluJr	SINE/Alu	1	258	(54)	934451
186	21.8	5.5	1.5	chr12	106160549	106160613	(27114696)	C	MIR	SINE/MIR	(14)	254	187	935738
1678	23.6	8.0	3.5	chr12	106160702	106161131	(27114178)	+	MLT1H	LTR/ERVL-MaLR	99	549	(0)	935739
2297	21.1	6.2	6.9	chr12	106345661	106346211	(26929098)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	1	936085
13	0.0	0.0	8.0	chr12	106773996	106774020	(26501289)	+	(GCCA)n	Simple_repeat	1	25	(0)	936817
480	29.9	6.2	5.9	chr12	107240544	107240799	(26034510)	+	MLT1N2	LTR/ERVL-MaLR	1	257	(292)	937704
12	8.4	0.0	6.9	chr12	107240855	107240883	(26034426)	+	(CTGAA)n	Simple_repeat	1	29	(0)	937705
255	36.5	0.9	0.0	chr12	107241067	107241173	(26034136)	C	MamRep1894	DNA/hAT	(0)	123	16	937706
14	18.8	5.0	4.8	chr12	107760887	107760946	(25514363)	+	(GCCGCG)n	Simple_repeat	1	63	(0)	938825
13	11.7	3.6	0.0	chr12	107761083	107761110	(25514199)	+	(CCCGG)n	Simple_repeat	1	29	(0)	938826
504	22.4	8.6	9.8	chr12	108035634	108035949	(25239360)	+	MLT1H	LTR/ERVL-MaLR	19	354	(195)	939308
1283	26.5	12.0	2.0	chr12	108059267	108059759	(25215550)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	939356
1122	26.7	6.8	2.7	chr12	108747313	108747756	(24527553)	+	MLT1H	LTR/ERVL-MaLR	60	549	(0)	940900
2071	15.6	0.9	11.7	chr12	108747855	108748043	(24527266)	C	Tigger17a	DNA/TcMar-Tigger	(1)	653	467	940901
1764	9.2	0.0	0.4	chr12	109662945	109663183	(23612126)	C	7SK	RNA	(93)	238	1	943000
646	31.4	6.6	6.1	chr12	109663269	109663765	(23611544)	+	L2c	LINE/L2	2885	3387	(0)	943001
20	21.4	4.9	3.5	chr12	109911187	109911267	(23364042)	+	(AGCTGG)n	Simple_repeat	1	85	(0)	943624
1936	16.1	0.3	0.3	chr12	109911330	109911639	(23363670)	+	AluJb	SINE/Alu	1	310	(2)	943625
626	29.2	7.3	9.6	chr12	110894016	110894409	(22380900)	C	MLT1J	LTR/ERVL-MaLR	(99)	413	30	945831
210	32.4	14.6	0.0	chr12	110894795	110894905	(22380404)	+	MamTip2	DNA/hAT-Tip100	85	214	(91)	945833
17	16.6	6.4	0.0	chr12	111598828	111598874	(21676435)	+	(CGAGGA)n	Simple_repeat	1	50	(0)	947447
74	1.4	0.0	0.0	chr12	111598950	111599019	(21676290)	+	(GCT)n	Simple_repeat	1	70	(0)	947448
28	3.3	0.0	0.0	chr12	112382088	112382118	(20893191)	+	(GCC)n	Simple_repeat	1	31	(0)	949064
36	0.0	0.0	0.0	chr12	112382328	112382360	(20892949)	+	(GCC)n	Simple_repeat	1	33	(0)	949065
1475	16.7	10.8	0.4	chr12	112418286	112418543	(20856766)	C	AluJb	SINE/Alu	(24)	288	1	949168
373	23.0	2.9	9.9	chr12	112418544	112418648	(20856661)	C	MIR	SINE/MIR	(110)	152	56	949169
14	25.4	3.0	4.4	chr12	112418853	112418936	(20856373)	+	(GGC)n	Simple_repeat	1	82	(0)	949170
987	23.0	14.8	8.8	chr12	112686290	112686800	(20588509)	+	MLT1H	LTR/ERVL-MaLR	1	547	(2)	949860
1512	14.5	8.3	3.4	chr12	112686850	112687111	(20588198)	+	AluJr	SINE/Alu	1	276	(36)	949861
784	26.3	18.9	4.3	chr12	112928400	112928864	(20346445)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	950418
2195	10.2	0.0	0.7	chr12	113413271	113413563	(19861746)	+	AluSx3	SINE/Alu	21	311	(0)	951531
191	16.1	0.0	0.0	chr12	113413613	113413643	(19861666)	C	MIR3	SINE/MIR	(64)	144	114	951532
459	22.1	13.0	2.9	chr12	113413939	113414110	(19861199)	+	MIRb	SINE/MIR	74	265	(3)	951533
274	29.7	6.7	2.6	chr12	113503861	113503974	(19771335)	+	MLT1H2	LTR/ERVL-MaLR	64	182	(307)	951740
278	21.5	0.2	8.8	chr12	113504079	113504253	(19771056)	+	MLT1H2	LTR/ERVL-MaLR	296	473	(16)	951740
307	24.6	5.3	2.3	chr12	113504254	113504382	(19770927)	+	L1ME5	LINE/L1	6054	6186	(8)	951734
451	27.6	15.0	5.3	chr12	113699693	113699995	(19575314)	+	MLT1H2	LTR/ERVL-MaLR	60	436	(113)	952270
2526	9.7	3.3	0.6	chr12	113700000	113700353	(19574956)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	952271
1276	23.5	12.0	8.3	chr12	113779504	113780019	(19495290)	+	MLT1H	LTR/ERVL-MaLR	23	536	(13)	952482
1461	16.4	0.4	0.4	chr12	114504949	114505187	(18770122)	C	7SK	RNA	(92)	239	1	953839
430	28.8	8.2	1.4	chr12	114505243	114505390	(18769919)	+	MIRb	SINE/MIR	3	161	(107)	953840
909	18.2	0.0	0.0	chr12	114505726	114505868	(18769441)	C	7SK	RNA	(167)	164	22	953841
36	40.8	1.7	1.3	chr12	114505959	114506122	(18769187)	+	(CAC)n	Simple_repeat	1	167	(0)	953842
37	20.0	1.2	0.0	chr12	114684052	114684132	(18591177)	+	GA-rich	Low_complexity	1	82	(0)	954267
363	32.4	2.6	2.6	chr12	114713667	114713818	(18561491)	+	MLT1H	LTR/ERVL-MaLR	105	256	(293)	954321
328	27.4	3.3	2.6	chr12	114713922	114714054	(18561255)	+	MLT1H	LTR/ERVL-MaLR	428	560	(0)	954321
1680	16.2	0.0	6.9	chr12	114714066	114714399	(18560910)	C	AluJr	SINE/Alu	(1)	311	1	954322
2001	21.4	4.7	4.9	chr12	115849670	115850160	(17425149)	C	MLT1D	LTR/ERVL-MaLR	(4)	501	12	956918
19	14.8	3.5	5.0	chr12	116737904	116737961	(16537348)	+	(GGCGCGG)n	Simple_repeat	1	60	(0)	958801
2316	11.2	6.6	0.8	chr12	118014341	118014699	(15260610)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	961642
2253	8.3	0.3	0.7	chr12	118097653	118097942	(15177367)	+	AluSq2	SINE/Alu	14	302	(11)	961832
1019	26.6	5.5	10.1	chr12	118467479	118467901	(14807408)	+	MLT1H	LTR/ERVL-MaLR	44	443	(106)	962625
1586	23.8	14.4	6.2	chr12	119435714	119436214	(13839095)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	964779
934	18.8	12.1	1.5	chr12	119482384	119482583	(13792726)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	964893
889	26.6	7.5	15.2	chr12	119482651	119483244	(13792065)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	3	964894
332	32.0	0.0	0.0	chr12	119667578	119667674	(13607635)	C	L2	LINE/L2	(571)	2848	2752	965294
14	19.2	4.8	0.0	chr12	119667740	119667781	(13607528)	+	(GCCTGG)n	Simple_repeat	1	44	(0)	965295
238	33.3	2.2	1.1	chr12	119917286	119917376	(13357933)	+	MLT1O	LTR/ERVL-MaLR	4	95	(500)	965794
353	23.8	10.9	8.0	chr12	119917503	119917763	(13357546)	C	MLT1H	LTR/ERVL-MaLR	(0)	579	243	965795
7284	4.2	0.8	31.3	chr12	119917798	119919714	(13355595)	C	SVA_C	Retroposon/SVA	(0)	1384	57	965796
748	26.2	2.3	6.2	chr12	120647210	120647386	(12627923)	C	MIRb	SINE/MIR	(24)	244	73	967589
825	8.7	6.8	2.4	chr12	120647387	120647513	(12627796)	C	FLAM_C	SINE/Alu	(10)	133	1	967590
748	26.2	2.3	6.2	chr12	120647514	120647559	(12627750)	C	MIRb	SINE/MIR	(196)	72	30	967589
1915	10.5	0.0	4.7	chr12	120647561	120647881	(12627428)	C	AluSx1	SINE/Alu	(0)	312	1	967591
19	26.8	1.5	1.5	chr12	120903964	120904028	(12371281)	+	(GCTG)n	Simple_repeat	1	66	(0)	968071
13	0.0	0.0	0.0	chr12	120904106	120904122	(12371187)	+	(GCG)n	Simple_repeat	1	17	(0)	968072
342	34.4	3.9	4.7	chr12	121191626	121191881	(12083428)	+	L2a	LINE/L2	2356	2609	(810)	968802
477	31.1	9.4	5.9	chr12	121191879	121192246	(12083063)	C	L2c	LINE/L2	(0)	3387	3004	968803
1983	14.4	11.0	4.4	chr12	121393976	121394477	(11880832)	C	MER51E	LTR/ERV1	(0)	640	115	969306
250	23.7	0.0	14.6	chr12	121394439	121394527	(11880782)	+	SVA_A	Retroposon/SVA	232	312	(1075)	969307
407	18.9	0.0	0.0	chr12	121394473	121394549	(11880760)	C	AluJb	SINE/Alu	(225)	77	1	969305
1752	17.4	0.7	1.4	chr12	121394560	121394846	(11880463)	C	AluJo	SINE/Alu	(27)	285	1	969308
15	14.5	3.0	10.3	chr12	121467059	121467124	(11808185)	+	(GCG)n	Simple_repeat	1	68	(0)	969439
31	0.0	0.0	0.0	chr12	121467301	121467329	(11807980)	+	(GGCTCG)n	Simple_repeat	1	29	(0)	969440
17	23.3	0.0	0.0	chr12	121652971	121653015	(11622294)	+	G-rich	Low_complexity	1	45	(0)	969945
1724	15.0	2.0	1.0	chr12	121672182	121672481	(11602828)	+	AluJr	SINE/Alu	6	308	(4)	970009
35	0.0	2.8	0.0	chr12	121672749	121672784	(11602525)	+	(TTGTT)n	Simple_repeat	1	37	(0)	970010
1878	9.4	3.5	0.7	chr12	121672785	121673060	(11602249)	C	AluSz	SINE/Alu	(28)	284	1	970011
210	31.4	1.4	1.4	chr12	121748864	121748934	(11526375)	C	MIRb	SINE/MIR	(178)	90	20	970250
481	17.0	5.1	5.9	chr12	121956438	121956482	(11318827)	C	MER53	DNA/hAT	(71)	122	78	970770
2369	10.9	0.0	0.0	chr12	121956483	121956794	(11318515)	C	AluSq2	SINE/Alu	(0)	313	2	970771
1633	19.9	12.4	0.3	chr12	123575936	123576283	(9699026)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	153	974451
17	24.8	4.8	0.0	chr12	123972426	123972436	(9302873)	+	(CCCGG)n	Simple_repeat	1	62	(0)	975247
13	24.5	4.2	0.0	chr12	123972437	123972484	(9302825)	+	(CCGCCG)n	Simple_repeat	1	50	(0)	975248
19	18.7	6.6	3.4	chr12	123972586	123972677	(9302632)	+	G-rich	Low_complexity	1	94	(0)	975249
34	23.6	6.7	1.9	chr12	123973003	123973151	(9302158)	+	G-rich	Low_complexity	1	159	(0)	975250
926	24.6	18.1	2.7	chr12	124162279	124162716	(9112593)	+	MLT1H	LTR/ERVL-MaLR	30	549	(0)	975589
615	23.5	0.7	1.3	chr12	124273788	124273942	(9001367)	C	MLT1H	LTR/ERVL-MaLR	(276)	273	120	975810
323	25.3	1.2	0.0	chr12	124588043	124588125	(8687184)	+	MLT1K	LTR/ERVL-MaLR	16	99	(496)	976343
868	29.3	4.6	0.3	chr12	124588188	124588478	(8686831)	+	MLT1K	LTR/ERVL-MaLR	201	504	(91)	976343
225	25.4	1.7	0.0	chr12	124716291	124716349	(8558960)	C	MIRb	SINE/MIR	(3)	265	206	976652
203	19.5	0.0	0.0	chr12	124716382	124716422	(8558887)	C	L2a	LINE/L2	(2)	3424	3384	976653
13	16.4	5.7	5.4	chr12	124716474	124716526	(8558783)	+	(CTGG)n	Simple_repeat	1	56	(0)	976654
418	34.0	11.3	4.8	chr12	124716533	124716863	(8558446)	C	MLT1H	LTR/ERVL-MaLR	(182)	367	13	976655
1162	27.2	13.6	0.6	chr12	125220690	125221295	(8054014)	+	L2a	LINE/L2	2720	3423	(3)	977811
25	5.3	0.0	4.7	chr12	127165863	127165905	(6109404)	+	(TTTTTA)n	Simple_repeat	1	43	(0)	981017
1856	4.6	4.2	0.2	chr12	127165908	127166171	(6109138)	C	LSU-rRNA_Hsa	rRNA	(1)	5034	4720	981018
134	1.9	3.0	2.3	chr12	127166172	127166337	(6108972)	+	(CCGAGGCCGA)n	Simple_repeat	1	171	(0)	981019
923	3.3	12.7	1.3	chr12	127166338	127166442	(6108867)	C	LSU-rRNA_Hsa	rRNA	(316)	4719	4612	981018
1048	21.9	4.1	6.4	chr12	128753935	128754244	(4521065)	+	L1MB7	LINE/L1	5771	6076	(108)	983791
605	26.5	9.3	5.0	chr12	128754393	128754710	(4520599)	C	MLT1H	LTR/ERVL-MaLR	(105)	444	112	983792
2279	10.8	0.7	0.0	chr12	128855747	128856051	(4419258)	C	AluSq2	SINE/Alu	(6)	307	1	984000
4069	8.9	1.1	2.0	chr12	128856052	128856440	(4418869)	C	MER41A	LTR/ERV1	(173)	381	1	983999
367	29.4	15.4	1.5	chr12	128856441	128856703	(4418606)	C	L2a	LINE/L2	(205)	3221	2916	984001
19	17.2	3.6	3.5	chr12	130839323	130839378	(2435931)	+	G-rich	Low_complexity	1	58	(0)	987296
11116	15.2	3.1	1.8	chr12	131521156	131521398	(1753911)	+	L1M3f	LINE/L1	5544	5774	(1788)	988223
3930	13.7	9.9	3.6	chr12	132136499	132136699	(1138610)	C	LTR19C	LTR/ERV1	(0)	779	600	989128
2002	9.1	0.8	0.8	chr12	132136700	132136963	(1138346)	C	AluSc	SINE/Alu	(45)	264	1	989129
506	27.5	6.3	1.3	chr12	132985913	132986063	(289246)	C	L1MB7	LINE/L1	(3665)	2550	2392	990290
2267	8.8	4.2	0.0	chr12	133126206	133126500	(148809)	+	AluYh3	SINE/Alu	1	308	(3)	990558
1867	14.9	1.0	2.0	chr12	133126531	133126825	(148484)	+	AluSz	SINE/Alu	1	292	(20)	990559
325	28.4	17.3	0.0	chr13	20525267	20525414	(93838914)	+	MIRb	SINE/MIR	55	233	(35)	994394
16	11.8	3.8	7.3	chr13	20525592	20525651	(93838677)	+	G-rich	Low_complexity	1	57	(0)	994395
214	28.6	5.4	1.4	chr13	29577945	29578015	(84786313)	C	X7B_LINE	LINE/CR1	(145)	105	32	1008329
523	29.1	11.7	8.6	chr13	29685402	29685796	(84678532)	+	MLT1H	LTR/ERVL-MaLR	125	533	(16)	1008470
1209	23.7	8.3	5.4	chr13	29685850	29686295	(84678033)	C	L1MC4	LINE/L1	(692)	7350	6891	1008471
50	10.7	1.2	0.0	chr13	30422289	30422369	(83941959)	+	(GCCCA)n	Simple_repeat	1	82	(0)	1009665
22	21.6	3.4	0.0	chr13	30422375	30422433	(83941895)	+	(GGC)n	Simple_repeat	1	61	(0)	1009666
1444	24.9	7.6	2.2	chr13	36509267	36509677	(77854651)	C	L2a	LINE/L2	(0)	3426	2992	1018623
2689	5.8	7.5	0.0	chr13	40373566	40373912	(73990416)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1024004
275	25.3	1.2	2.4	chr13	40374034	40374118	(73990210)	C	L2a	LINE/L2	(0)	3426	3343	1024005
15	18.3	0.0	2.6	chr13	40789604	40789642	(73574686)	+	(GAGCCG)n	Simple_repeat	1	39	(0)	1024731
22	17.0	6.4	3.6	chr13	46211849	46211926	(68152402)	+	(GCCTC)n	Simple_repeat	1	83	(0)	1033525
1357	24.2	5.4	2.1	chr13	50459397	50459734	(63904594)	+	MLT1H	LTR/ERVL-MaLR	3	352	(197)	1040167
801	30.2	5.4	3.5	chr13	50459760	50460013	(63904315)	+	MIRb	SINE/MIR	5	263	(5)	1040168
13	23.6	0.0	0.0	chr13	50549644	50549678	(63814650)	+	(AATAA)n	Simple_repeat	1	35	(0)	1040280
447	33.3	14.8	3.0	chr13	50701452	50701915	(63662413)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	22	1040516
44	0.0	0.0	0.0	chr13	52455636	52455675	(61908653)	+	(GCGGTG)n	Simple_repeat	1	40	(0)	1043143
294	21.3	11.5	0.9	chr13	53379703	53379811	(60984517)	+	MLT1I	LTR/ERVL-MaLR	282	403	(8)	1044565
438	35.1	9.3	3.0	chr13	56616042	56616435	(57747893)	+	MLT1H	LTR/ERVL-MaLR	85	505	(44)	1048586
2471	8.3	0.3	0.0	chr13	56616495	56616794	(57747534)	+	AluY	SINE/Alu	1	301	(10)	1048587
305	36.5	6.2	5.8	chr13	58302541	58302799	(56061529)	C	MLT1H	LTR/ERVL-MaLR	(184)	365	106	1050589
819	30.2	8.1	9.9	chr13	58302857	58303382	(56060946)	+	L2a	LINE/L2	2911	3426	(0)	1050588
2231	6.8	0.0	2.2	chr13	61823644	61823921	(52540407)	C	AluYj4	SINE/Alu	(0)	311	40	1055244
12386	8.5	0.1	0.1	chr13	62156145	62157767	(52206561)	+	HERV9-int	LTR/ERV1	6813	8436	(0)	1055638
3340	9.9	8.5	0.0	chr13	62157768	62158242	(52206086)	+	LTR12F	LTR/ERV1	1	519	(0)	1055638
642	35.4	4.2	2.3	chr13	63632402	63632794	(50731534)	C	ERVL-B4-int	LTR/ERVL	(2125)	3589	3189	1057531
271	33.2	12.3	4.6	chr13	63632813	63633074	(50731254)	C	LTR16E1	LTR/ERVL	(241)	297	13	1057532
1783	16.8	0.3	1.1	chr13	67184449	67184734	(47179594)	+	AluJb	SINE/Alu	3	286	(26)	1061962
23	25.0	1.8	0.0	chr13	67230277	67230331	(47133997)	+	(CT)n	Simple_repeat	1	56	(0)	1062005
322	31.4	11.6	9.9	chr13	68012198	68012459	(46351869)	C	7SK	RNA	(52)	279	13	1062987
356	28.3	10.9	4.4	chr13	68012567	68012725	(46351603)	C	MIR3	SINE/MIR	(41)	167	2	1062988
614	35.5	4.9	4.2	chr13	68199266	68199747	(46164581)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	4	1063228
6644	14.5	1.9	0.0	chr13	68982978	68984033	(45380295)	C	LTR27E	LTR/ERV1	(0)	1077	1	1064217
8921	17.9	0.6	2.6	chr13	69644405	69645519	(44718809)	+	MSTA-int	LTR/ERVL-MaLR	482	1578	(53)	1065039
2709	22.2	17.9	3.8	chr13	70386465	70387252	(43977076)	C	MER52A	LTR/ERV1	(832)	923	1	1066068
421	27.9	9.5	1.3	chr13	70387339	70387529	(43976799)	+	MLT1A1	LTR/ERVL-MaLR	286	549	(0)	1066066
20	0.0	0.0	0.0	chr13	70387560	70387581	(43976747)	+	(AC)n	Simple_repeat	1	22	(0)	1066069
197	17.1	10.9	0.0	chr13	74158957	74158997	(40205331)	C	L2c	LINE/L2	(0)	3387	3342	1071593
234	32.0	11.0	0.9	chr13	74159002	74159159	(40205169)	C	MIR3	SINE/MIR	(32)	176	5	1071594
270	24.2	5.0	6.4	chr13	74734749	74734889	(39629439)	+	MER121	DNA/hAT?	56	194	(207)	1072352
2017	12.8	15.9	0.8	chr13	74734892	74735254	(39629074)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1072353
35	5.4	0.0	0.0	chr13	75480868	75480906	(38883422)	+	(CA)n	Simple_repeat	1	39	(0)	1073408
19	13.9	3.9	3.8	chr13	75482400	75482450	(38881878)	+	(TCCT)n	Simple_repeat	1	53	(0)	1073409
1946	23.6	7.7	1.9	chr13	76965920	76966447	(37397881)	C	MER68B	LTR/ERVL	(0)	564	4	1075515
14	16.9	0.0	2.9	chr13	77697539	77697573	(36666755)	+	(CCCCGG)n	Simple_repeat	1	35	(0)	1076566
17	22.7	1.9	1.9	chr13	77697597	77697649	(36666679)	+	(CCGCC)n	Simple_repeat	1	54	(0)	1076567
30	25.8	4.7	2.2	chr13	77698061	77698189	(36666139)	+	(GCC)n	Simple_repeat	1	135	(0)	1076568
14	17.5	6.7	0.0	chr13	77698193	77698264	(36666064)	+	G-rich	Low_complexity	1	76	(0)	1076569
12	21.9	1.9	5.6	chr13	77698385	77698437	(36665891)	+	G-rich	Low_complexity	1	54	(0)	1076570
1579	16.1	7.7	5.1	chr13	78015030	78015383	(36348945)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1076961
453	26.0	11.6	2.6	chr13	78015384	78015503	(36348825)	+	L1ME4a	LINE/L1	5770	5905	(219)	1076960
1904	13.2	10.5	2.6	chr13	78895368	78895647	(35468681)	+	THE1D	LTR/ERVL-MaLR	1	317	(64)	1078175
2638	11.0	0.0	0.0	chr13	78895648	78896011	(35468317)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1078176
253	17.2	4.5	3.0	chr13	79039935	79040000	(35324328)	C	LTR81B	LTR/Gypsy	(1197)	196	130	1078350
226	23.9	5.4	4.3	chr13	79040146	79040237	(35324091)	+	MLT1L	LTR/ERVL-MaLR	347	439	(171)	1078351
311	29.7	6.3	7.0	chr13	79040515	79040697	(35323631)	+	MIRc	SINE/MIR	60	232	(36)	1078352
18	10.5	0.0	0.0	chr13	79481622	79481652	(34882676)	+	(TTTGT)n	Simple_repeat	1	31	(0)	1079007
2262	10.7	4.5	6.2	chr13	80147182	80147569	(34216759)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1079856
1645	16.2	3.2	8.3	chr13	80147570	80147755	(34216573)	C	L1MA8	LINE/L1	(219)	6072	5888	1079854
258	23.1	7.3	2.9	chr13	80147792	80147890	(34216438)	+	L2c	LINE/L2	3199	3328	(59)	1079857
1697	14.4	12.6	1.2	chr13	81031580	81031916	(33332412)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1081031
5653	22.6	7.6	1.8	chr13	81031917	81031934	(33332394)	C	L1M1	LINE/L1	(7532)	33	17	1081028
555	37.1	6.7	5.0	chr13	81031942	81032619	(33331709)	+	L2	LINE/L2	2088	2777	(642)	1081032
729	32.5	8.1	4.7	chr13	82043404	82043809	(32320519)	C	MLT1H	LTR/ERVL-MaLR	(3)	546	126	1082263
453	28.7	5.9	0.0	chr13	82494680	82494822	(31869506)	C	Zaphod3	DNA/hAT-Tip100	(2471)	152	1	1082833
10693	11.6	0.9	0.7	chr13	83186972	83188545	(31175783)	+	THE1B-int	LTR/ERVL-MaLR	1	1578	(2)	1083698
1777	16.1	9.3	2.1	chr13	83188548	83188884	(31175444)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1083698
1656	23.5	1.4	0.0	chr13	83801616	83801973	(30562355)	+	MLT1A0	LTR/ERVL-MaLR	1	363	(2)	1084418
1384	19.4	2.2	6.9	chr13	84419911	84420198	(29944130)	+	AluJo	SINE/Alu	1	274	(38)	1085214
1817	17.5	2.1	2.1	chr13	84420199	84420572	(29943756)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	1085215
3324	18.4	2.7	3.2	chr13	85619113	85619827	(28744501)	C	MER67C	LTR/ERV1	(0)	711	1	1086779
1378	17.1	11.4	0.0	chr13	86972615	86972878	(27391450)	C	MER1B	DNA/hAT-Charlie	(41)	298	1	1088393
365	25.3	3.3	0.0	chr13	88228581	88228667	(26135661)	+	MER115	DNA/hAT-Tip100	599	688	(5)	1090059
1006	22.3	3.0	3.9	chr13	88228858	88229090	(26135238)	C	MER76	LTR/ERVL	(456)	235	5	1090060
1856	17.4	14.0	0.5	chr13	88593749	88594118	(25770210)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1090503
13188	20.4	2.2	2.2	chr13	88594119	88594319	(25770009)	+	L1PA15-16	LINE/L1	2339	2543	(4310)	1090501
507	33.0	5.8	1.3	chr13	89701615	89701844	(24662484)	C	LTR40b	LTR/ERVL	(2)	460	220	1091965
682	21.3	0.8	0.8	chr13	89816879	89817000	(24547328)	+	AluJr	SINE/Alu	3	124	(188)	1092127
852	18.0	2.5	6.0	chr13	89817006	89817046	(24547282)	+	AluJo	SINE/Alu	127	170	(142)	1092128
2317	11.9	3.0	2.5	chr13	89817047	89817408	(24546920)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1092129
1332	7.2	0.0	0.0	chr13	90771442	90771607	(23592721)	C	MER4A1	LTR/ERV1	(306)	166	1	1093361
1835	10.6	0.0	7.2	chr13	90771617	90771909	(23592419)	+	AluSx	SINE/Alu	41	312	(0)	1093362
2974	11.9	5.3	0.0	chr13	90771940	90772386	(23591942)	+	MER4A1	LTR/ERV1	1	472	(0)	1093363
14	27.5	1.7	3.3	chr13	91348957	91349016	(23015312)	+	(CGC)n	Simple_repeat	1	61	(0)	1094137
34	3.0	0.0	0.0	chr13	91586564	91586597	(22777731)	+	(AG)n	Simple_repeat	1	34	(0)	1094463
1712	11.6	13.9	0.9	chr13	91586598	91586768	(22777560)	C	THE1D	LTR/ERVL-MaLR	(174)	207	3	1094461
1289	12.7	0.3	2.5	chr13	92407983	92408248	(21956080)	+	MER1B	DNA/hAT-Charlie	1	300	(229)	1095514
382	22.6	3.1	0.0	chr13	92408296	92408388	(21955940)	+	MamRep605	LTR?	409	504	(345)	1095515
365	21.9	5.3	8.6	chr13	96053795	96053929	(18310399)	+	MER5B	DNA/hAT-Charlie	6	135	(43)	1101024
846	26.4	5.0	4.4	chr13	99595977	99596304	(14768024)	C	L1ME4b	LINE/L1	(190)	702	422	1106507
2109	12.2	7.6	0.8	chr13	99596306	99596660	(14767668)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1106510
32	22.2	1.8	4.5	chr13	99606510	99606661	(14757667)	+	G-rich	Low_complexity	1	147	(0)	1106537
14	21.8	6.8	3.8	chr13	99606673	99606758	(14757570)	+	(GGC)n	Simple_repeat	1	88	(0)	1106538
12	15.3	5.3	2.5	chr13	100588762	100588799	(13775529)	+	G-rich	Low_complexity	1	40	(0)	1108183
2297	12.0	1.7	0.8	chr13	106734654	106735005	(7629323)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1116470
17	18.8	5.4	1.7	chr13	110705974	110706029	(3658299)	+	(CCGCCCG)n	Simple_repeat	1	59	(0)	1121626
17	14.6	4.1	3.9	chr13	110706167	110706215	(3658113)	+	(CACGCC)n	Simple_repeat	1	51	(0)	1121627
888	21.9	4.4	1.6	chr13	111216022	111216263	(3148065)	C	L1MDa	LINE/L1	(4896)	1737	1489	1122308
343	31.5	3.7	1.5	chr13	111216747	111216878	(3147450)	C	L1MDa	LINE/L1	(6293)	340	206	1122308
2176	4.0	0.0	0.0	chr14	19668195	19668466	(87375252)	+	L1PA6	LINE/L1	5515	5786	(368)	1127019
16	28.9	0.0	3.2	chr14	19668474	19668535	(87375183)	+	(GCG)n	Simple_repeat	1	62	(0)	1127020
3024	11.8	2.8	1.7	chr14	20207552	20208076	(86835642)	C	L1MA8	LINE/L1	(4)	6287	5757	1127676
2723	6.9	2.3	0.0	chr14	20666633	20666979	(86376739)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1128423
26	11.5	0.0	0.0	chr14	20667003	20667040	(86376678)	+	(A)n	Simple_repeat	1	38	(0)	1128427
18	23.3	0.0	0.0	chr14	21091984	21092028	(85951690)	+	(TCC)n	Simple_repeat	1	45	(0)	1129070
17	13.8	5.0	0.0	chr14	22886947	22886986	(84156732)	+	(CCGCC)n	Simple_repeat	1	42	(0)	1131899
32	0.0	0.0	0.0	chr14	22957915	22957944	(84085774)	+	(GCCCA)n	Simple_repeat	1	30	(0)	1132037
1806	12.6	0.0	1.1	chr14	22958036	22958297	(84085421)	C	AluSq	SINE/Alu	(2)	311	53	1132038
16	3.5	0.0	8.6	chr14	24429581	24429615	(82614103)	+	(CCTCCG)n	Simple_repeat	1	35	(0)	1134254
1073	19.6	12.4	3.0	chr14	31013122	31013391	(76030327)	+	AluJb	SINE/Alu	2	300	(12)	1142717
17	6.8	6.5	0.0	chr14	31207671	31207701	(75836017)	+	(GGC)n	Simple_repeat	1	33	(0)	1143146
205	21.9	1.5	9.9	chr14	31208260	31208330	(75835388)	C	MIRb	SINE/MIR	(82)	186	122	1143147
13	21.4	2.1	4.2	chr14	32077304	32077356	(74966362)	+	GA-rich	Low_complexity	1	51	(0)	1144640
15	17.7	0.0	0.0	chr14	32077370	32077401	(74966317)	+	(CGC)n	Simple_repeat	1	32	(0)	1144641
29	20.8	0.0	0.0	chr14	32939624	32939680	(74104038)	+	A-rich	Low_complexity	1	57	(0)	1145783
23	26.6	2.1	3.1	chr14	32939778	32939872	(74103846)	+	G-rich	Low_complexity	1	97	(0)	1145784
16	19.5	0.0	7.3	chr14	34539791	34539845	(72503873)	+	(GGCGG)n	Simple_repeat	1	55	(0)	1148042
2466	5.9	1.3	0.3	chr14	34539860	34540162	(72503556)	C	AluSp	SINE/Alu	(7)	306	1	1148043
1737	11.7	0.0	0.4	chr14	36593908	36594147	(70449571)	C	7SK	RNA	(92)	239	1	1151808
258	16.0	3.9	0.0	chr14	36594148	36594197	(70449521)	C	MLT1C	LTR/ERVL-MaLR	(338)	52	1	1151807
34	29.1	1.4	3.5	chr14	39431953	39431960	(67611758)	+	(CGC)n	Simple_repeat	1	14	(130)	1155722
13	24.6	4.5	2.9	chr14	39431961	39432026	(67611692)	+	(CGCCTGC)n	Simple_repeat	1	69	(0)	1155723
34	29.1	1.4	3.5	chr14	39432027	39432094	(67611624)	+	(CGC)n	Simple_repeat	15	144	(0)	1155722
233	24.2	11.4	0.0	chr14	44701372	44701433	(62342285)	+	MLT1M	LTR/ERVL-MaLR	46	115	(557)	1162066
1438	21.1	11.5	5.2	chr14	44701474	44701966	(62341752)	C	MLT1H	LTR/ERVL-MaLR	(21)	603	3	1162067
280	25.8	18.9	2.9	chr14	45748400	45748642	(61295076)	C	MLT1H	LTR/ERVL-MaLR	(18)	531	241	1163510
575	24.8	2.8	1.3	chr14	45748658	45748847	(61294871)	C	MLT1H	LTR/ERVL-MaLR	(324)	165	9	1163510
20	13.1	5.8	1.8	chr14	48889381	48889432	(58154286)	+	(ATAATAC)n	Simple_repeat	1	55	(0)	1167274
2218	16.6	5.7	5.2	chr14	48889758	48890215	(58153503)	+	MER31B	LTR/ERV1	7	466	(0)	1167275
20	25.8	0.0	4.3	chr14	49767563	49767632	(57276086)	+	(CGG)n	Simple_repeat	1	70	(0)	1168591
675	23.8	7.9	3.7	chr14	50068340	50068557	(56975161)	+	L1MC5	LINE/L1	6995	7222	(2082)	1169207
1784	10.8	0.0	1.6	chr14	50068568	50068812	(56974906)	+	7SK	RNA	1	241	(90)	1169208
2390	9.8	0.3	0.0	chr14	50068823	50069127	(56974591)	+	AluSq2	SINE/Alu	2	307	(6)	1169209
29	0.0	0.0	0.0	chr14	50235502	50235526	(56808192)	+	(AT)n	Simple_repeat	1	25	(0)	1169581
1337	23.7	12.9	9.3	chr14	50235527	50235584	(56808134)	+	L1ME4b	LINE/L1	658	735	(157)	1169580
2884	8.6	1.1	1.3	chr14	50235585	50235959	(56807759)	C	THE1C	LTR/ERVL-MaLR	(1)	374	1	1169582
1337	23.7	12.9	9.3	chr14	50235960	50236047	(56807671)	+	L1ME4b	LINE/L1	736	838	(54)	1169580
669	16.8	2.5	1.7	chr14	50236051	50236169	(56807549)	C	AluJo	SINE/Alu	(180)	132	13	1169583
13	13.1	2.7	5.3	chr14	50396967	50397003	(56646715)	+	(CCCG)n	Simple_repeat	1	38	(0)	1169909
30	0.0	0.0	0.0	chr14	51860686	51860714	(55183004)	+	(GCTGG)n	Simple_repeat	1	29	(0)	1172095
2396	11.9	0.6	2.2	chr14	52395115	52395484	(54648234)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1172875
625	23.7	9.3	3.4	chr14	52395715	52396053	(54647665)	C	MamGypLTR1a	LTR/Gypsy	(398)	384	3	1172876
689	18.0	4.8	3.8	chr14	52547336	52547520	(54496198)	+	MER5C	DNA/hAT-Charlie	44	230	(83)	1173104
445	28.6	14.5	5.3	chr14	52547573	52547834	(54495884)	+	MLT1I-int	LTR/ERVL-MaLR	1023	1312	(75)	1173103
2117	9.3	6.6	2.7	chr14	52797616	52797980	(54245738)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	1173536
694	27.4	7.4	0.0	chr14	52798012	52798212	(54245506)	+	MIR	SINE/MIR	40	256	(6)	1173537
37	17.0	1.2	2.4	chr14	52951228	52951310	(54092408)	+	G-rich	Low_complexity	1	84	(0)	1173829
503	31.5	6.4	9.6	chr14	54113351	54113870	(52929848)	+	HAL1	LINE/L1	271	772	(1735)	1175470
34	2.9	0.0	0.0	chr14	54489119	54489154	(52554564)	+	(T)n	Simple_repeat	1	36	(0)	1175997
20	16.2	5.3	1.7	chr14	54509883	54509939	(52533779)	+	(GGCTG)n	Simple_repeat	1	60	(0)	1176039
513	31.4	9.8	6.8	chr14	56504514	56504879	(50538839)	+	MLT1H	LTR/ERVL-MaLR	26	403	(146)	1179289
1532	14.1	14.0	6.8	chr14	62624387	62624722	(44418996)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1188098
1381	25.7	1.9	14.0	chr14	62624723	62625087	(44418631)	+	ERV3-16A3_LTR	LTR/ERVL	113	420	(2)	1188097
19	10.4	5.1	6.5	chr14	64504805	64504863	(42538855)	+	(CCGCGCG)n	Simple_repeat	1	62	(0)	1191410
16	21.0	0.0	4.2	chr14	64972194	64972241	(42071477)	+	(GCCC)n	Simple_repeat	1	48	(0)	1192184
25	16.3	1.5	4.4	chr14	64972255	64972321	(42071397)	+	(GCTCG)n	Simple_repeat	1	68	(0)	1192185
13	22.6	4.2	2.0	chr14	64972343	64972348	(42071370)	+	(GCC)n	Simple_repeat	1	49	(0)	1192186
14	11.6	4.9	4.7	chr14	64972349	64972389	(42071329)	+	(GCCCCT)n	Simple_repeat	1	43	(0)	1192187
15	18.6	0.0	8.6	chr14	66508442	66508499	(40535219)	+	(CTCCCGG)n	Simple_repeat	1	58	(0)	1194714
2341	13.5	0.3	5.0	chr14	66622998	66623379	(40420339)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1194840
1313	15.4	0.0	0.0	chr14	66623451	66623638	(40420080)	+	AluSz6	SINE/Alu	116	303	(9)	1194844
422	26.5	5.6	2.5	chr14	66623740	66623859	(40419859)	+	HERVL40-int	LTR/ERVL	1278	1401	(4129)	1194845
30	5.5	0.0	0.0	chr14	68548294	68548331	(38495387)	+	(GCCCA)n	Simple_repeat	1	38	(0)	1197866
14	12.0	0.0	9.1	chr14	68795281	68795324	(38248394)	+	(CCCCCAC)n	Simple_repeat	1	44	(0)	1198274
2243	21.4	3.0	3.2	chr14	70117580	70118138	(36925580)	+	MER74A	LTR/ERVL	1	558	(0)	1200698
418	29.4	11.5	2.0	chr14	72482110	72482361	(34561357)	C	Tigger15a	DNA/TcMar-Tigger	(99)	616	341	1204363
1673	23.4	9.1	3.9	chr14	72482419	72482854	(34560864)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	89	1204365
1634	13.7	8.6	0.7	chr14	73143739	73144015	(33899703)	+	AluJr	SINE/Alu	9	309	(3)	1205611
618	20.6	11.2	5.7	chr14	73644241	73644467	(33399251)	C	L1M5	LINE/L1	(436)	5688	5448	1206758
1271	16.7	3.6	4.0	chr14	73950752	73951003	(33092715)	C	L1MB8	LINE/L1	(653)	5531	5276	1207447
462	24.6	4.1	0.0	chr14	74608903	74609020	(32434698)	+	L2a	LINE/L2	3303	3425	(1)	1208826
1361	25.9	10.6	3.4	chr14	75520192	75520659	(31523059)	+	MLT1H	LTR/ERVL-MaLR	1	547	(2)	1210621
306	23.8	5.9	1.2	chr14	75520689	75520769	(31522949)	+	L2a	LINE/L2	3342	3426	(0)	1210622
478	27.7	2.6	9.1	chr14	76531947	76532232	(30511486)	C	CR1-16_AMi	LINE/CR1	(399)	452	186	1212392
22	22.3	3.9	5.6	chr14	76947454	76947571	(30096147)	+	(TGCCCC)n	Simple_repeat	1	115	(0)	1213267
12	10.0	0.0	0.0	chr14	77034279	77034300	(30009418)	+	(GGAG)n	Simple_repeat	1	22	(0)	1213477
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
383	28.5	1.7	2.9	chr14	78221810	78221983	(28821735)	C	MLT1H2	LTR/ERVL-MaLR	(317)	172	5	1215857
2179	11.4	0.3	1.0	chr14	89583862	89584158	(17459560)	C	AluSz	SINE/Alu	(17)	295	1	1232346
1449	15.4	0.0	0.9	chr14	89584195	89584421	(17459297)	+	AluSx3	SINE/Alu	78	302	(9)	1232347
27	14.9	1.6	3.1	chr14	90828278	90828340	(16215378)	+	G-rich	Low_complexity	1	64	(0)	1234548
225	30.3	13.5	3.9	chr14	90828677	90828803	(16214915)	C	MIR3	SINE/MIR	(62)	146	6	1234549
24	22.4	1.3	3.8	chr14	93115402	93115479	(13928239)	+	(CCGC)n	Simple_repeat	1	79	(0)	1238816
18	18.4	4.1	0.0	chr14	93115477	93115525	(13928193)	+	(GGCTGA)n	Simple_repeat	1	51	(0)	1238817
568	24.6	13.1	10.7	chr14	93802561	93803057	(13240661)	+	MLT1H	LTR/ERVL-MaLR	39	549	(0)	1240034
15	17.7	2.2	4.3	chr14	93939678	93939730	(13103988)	+	G-rich	Low_complexity	1	51	(0)	1240324
592	28.3	0.1	2.5	chr14	93939833	93940016	(13103702)	C	MIRb	SINE/MIR	(80)	188	4	1240325
2550	6.7	0.0	1.6	chr14	94692709	94693023	(12350695)	+	AluY	SINE/Alu	2	311	(0)	1241578
493	31.8	10.5	2.4	chr14	94693024	94693134	(12350584)	+	L1M5	LINE/L1	5127	5251	(895)	1241577
262	13.1	9.0	0.0	chr14	94693138	94693198	(12350520)	+	L1ME4b	LINE/L1	3	69	(823)	1241579
2146	11.5	4.4	6.2	chr14	94693235	94693563	(12350155)	+	THE1B	LTR/ERVL-MaLR	1	336	(28)	1241580
347	30.1	20.2	2.1	chr14	95340288	95340477	(11703241)	+	MIRb	SINE/MIR	16	248	(20)	1242815
2532	6.7	7.3	0.3	chr14	95585077	95585406	(11458312)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1243299
1267	15.9	0.0	0.0	chr14	95585445	95585626	(11458092)	C	AluSx	SINE/Alu	(129)	183	2	1243300
396	5.2	6.5	0.0	chr14	96838584	96838641	(10205077)	C	MLT2A2	LTR/ERVL	(0)	561	500	1245619
807	10.0	1.8	2.3	chr14	96838604	96838751	(10204967)	C	THE1B	LTR/ERVL-MaLR	(283)	145	1	1245620
2630	23.0	7.8	7.5	chr14	96838889	96839831	(10203887)	C	L1ME2	LINE/L1	(7)	6330	5359	1245621
855	28.0	6.4	8.0	chr14	98381539	98381950	(8661768)	C	L1MC5a	LINE/L1	(3)	2774	2370	1248273
232	28.3	21.7	0.0	chr14	99066842	99067021	(7976697)	C	MIRb	SINE/MIR	(19)	249	20	1249443
385	16.3	0.0	3.8	chr14	99067123	99067915	(7975803)	+	(CCCAG)n	Simple_repeat	1	793	(0)	1249444
48	15.6	1.1	0.0	chr14	99274710	99274797	(7768921)	+	(CCT)n	Simple_repeat	1	89	(0)	1249761
415	34.7	0.6	0.6	chr14	100703352	100703522	(6340196)	C	L4_A_Mam	LINE/RTE-X	(961)	4029	3859	1252286
1876	14.8	2.5	0.0	chr14	102151383	102151688	(4892030)	C	AluJo	SINE/Alu	(0)	312	1	1254351
1058	18.8	0.0	1.2	chr14	102151727	102151896	(4891822)	C	AluJb	SINE/Alu	(1)	311	144	1254352
1899	12.7	1.1	3.4	chr14	102609439	102609730	(4433988)	C	AluSx	SINE/Alu	(11)	301	17	1255302
2048	8.5	5.9	2.7	chr14	102609858	102610150	(4433568)	+	AluSq2	SINE/Alu	1	303	(10)	1255303
2166	14.0	3.6	3.0	chr14	102700821	102701182	(4342536)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1255528
25	19.6	1.7	0.0	chr14	103057747	103057810	(3985908)	+	(GGCGG)n	Simple_repeat	1	65	(0)	1256116
16	18.9	2.3	2.2	chr14	103385444	103385487	(3658231)	+	(GCG)n	Simple_repeat	1	45	(0)	1256712
14	20.8	0.0	0.0	chr14	103385584	103385616	(3658102)	+	(CTC)n	Simple_repeat	1	33	(0)	1256713
13	18.8	0.0	0.0	chr14	103847670	103847700	(3196018)	+	G-rich	Low_complexity	1	31	(0)	1257632
1552	11.3	22.4	1.0	chr14	104233255	104233548	(2810170)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1258209
12	15.9	2.6	5.0	chr14	104805071	104805109	(2238609)	+	(GGCTG)n	Simple_repeat	1	40	(0)	1258829
812	21.6	2.9	5.7	chr14	105188230	105188376	(1855342)	C	HAL1	LINE/L1	(782)	1725	1587	1259370
2041	13.1	1.7	0.7	chr14	105188377	105188667	(1855051)	+	AluSx3	SINE/Alu	1	294	(17)	1259371
1111	13.3	0.2	0.2	chr14	105589194	105591282	(1452436)	+	(CCAGC)n	Simple_repeat	1	2094	(0)	1259873
203	39.2	1.2	0.2	chr14	105602840	105603045	(1440673)	+	(CCAGC)n	Simple_repeat	1	210	(0)	1259881
28	0.0	0.0	0.0	chr14	105603046	105603072	(1440646)	+	(CCCAG)n	Simple_repeat	1	27	(0)	1259882
203	39.2	1.2	0.2	chr14	105603073	105603115	(1440603)	+	(CCAGC)n	Simple_repeat	1	42	(0)	1259883
25	3.8	8.9	1.6	chr14	105603116	105603171	(1440547)	+	(CCCAGCTCAG)n	Simple_repeat	1	61	(0)	1259884
203	39.2	1.2	0.2	chr14	105603172	105603918	(1439800)	+	(CCAGC)n	Simple_repeat	3	756	(0)	1259885
1493	25.2	0.3	0.3	chr14	105856955	105860390	(1183328)	+	(CCAGC)n	Simple_repeat	1	3446	(0)	1260089
3287	7.5	4.4	2.0	chr15	20100266	20106500	(81884689)	+	(TGGCTTGGC)n	Simple_repeat	1	6508	(0)	1262786
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
2801	7.6	4.2	1.9	chr15	21107372	21113022	(80878167)	+	(TGGCTTGGC)n	Simple_repeat	1	5780	(0)	1264238
345	32.5	3.5	12.2	chr15	22863384	22863695	(79127494)	C	L1MEg	LINE/L1	(5693)	391	108	1266454
277	31.1	9.0	1.5	chr15	22863681	22863935	(79127254)	C	L1MEg	LINE/L1	(5765)	1785	1593	1266457
306	32.5	4.0	4.0	chr15	27440576	27440748	(74550441)	C	MIR	SINE/MIR	(1)	261	89	1272634
432	27.0	4.4	0.0	chr15	29637688	29637839	(72353350)	C	LTR33C	LTR/ERVL	(9)	620	462	1275783
615	23.5	8.3	3.5	chr15	29637912	29638083	(72353106)	C	MLT2E	LTR/ERVL	(318)	310	130	1275784
587	25.4	11.5	3.5	chr15	29638249	29638448	(72352741)	C	MER20	DNA/hAT-Charlie	(1)	218	1	1275785
691	30.2	5.5	3.5	chr15	33098286	33098680	(68892509)	+	HAL1	LINE/L1	480	882	(1625)	1280848
457	28.1	5.3	10.6	chr15	33098727	33098986	(68892203)	+	LTR33	LTR/ERVL	212	459	(56)	1280849
1395	23.4	11.3	4.9	chr15	35030760	35031271	(66959918)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	1283832
22	19.0	0.0	0.0	chr15	37100568	37100609	(64890580)	+	G-rich	Low_complexity	1	42	(0)	1286511
33	14.5	0.0	0.0	chr15	37100691	37100744	(64890445)	+	(GT)n	Simple_repeat	1	54	(0)	1286512
18	17.3	0.0	2.8	chr15	37100727	37100762	(64890427)	+	(GC)n	Simple_repeat	1	36	(0)	1286513
23	17.4	4.9	1.9	chr15	37100766	37100818	(64890371)	+	GA-rich	Low_complexity	1	54	(0)	1286514
26	26.8	2.5	4.1	chr15	41558999	41559118	(60432071)	+	(GCGGCG)n	Simple_repeat	1	123	(0)	1293644
13	19.1	0.0	0.0	chr15	42575235	42575264	(59415925)	+	G-rich	Low_complexity	1	30	(0)	1295396
18	14.5	7.3	1.7	chr15	42575615	42575669	(59415520)	+	G-rich	Low_complexity	1	59	(0)	1295397
15	25.2	1.7	3.3	chr15	42737122	42737181	(59254008)	+	(GGCGGC)n	Simple_repeat	1	61	(0)	1295667
19	31.9	3.8	0.9	chr15	43746158	43746263	(58244926)	+	(CCCAGC)n	Simple_repeat	1	110	(0)	1297538
15	30.2	0.0	6.6	chr15	43746221	43746311	(58244878)	+	(CCCCGC)n	Simple_repeat	1	91	(0)	1297539
12	22.6	4.3	5.6	chr15	58933159	58933227	(43057962)	+	(GCGGTGGC)n	Simple_repeat	1	72	(0)	1321105
781	24.6	8.7	9.9	chr15	59360905	59361337	(42629852)	+	MLT1H2	LTR/ERVL-MaLR	56	482	(7)	1321894
1582	26.8	7.5	1.1	chr15	62094667	62095130	(39896059)	+	MER20B	DNA/hAT-Charlie	1	496	(287)	1326336
20	23.1	0.0	3.3	chr15	63121643	63121702	(38869487)	+	GA-rich	Low_complexity	1	60	(0)	1327996
11	21.6	9.3	0.0	chr15	63121768	63121821	(38869368)	+	(CCGCGCC)n	Simple_repeat	1	59	(0)	1327997
17	22.7	1.9	1.8	chr15	63121977	63122030	(38869159)	+	G-rich	Low_complexity	1	55	(0)	1327998
329	31.2	11.4	0.8	chr15	65517022	65517261	(36473928)	+	MIRc	SINE/MIR	10	260	(8)	1332810
381	21.5	0.0	0.0	chr15	66270142	66270220	(35720969)	+	MER135	DNA	43	121	(107)	1334318
490	29.1	7.0	4.8	chr15	66824437	66824772	(35166417)	+	MLT1H	LTR/ERVL-MaLR	1	344	(205)	1335521
13	11.7	3.6	0.0	chr15	66842597	66842624	(35148565)	+	(GCGG)n	Simple_repeat	1	29	(0)	1335564
460	25.8	18.4	1.1	chr15	68220232	68220419	(33770770)	C	MIRb	SINE/MIR	(17)	251	24	1337940
295	21.4	3.5	5.6	chr15	68220683	68220771	(33770418)	+	MLT1K	LTR/ERVL-MaLR	509	595	(0)	1337939
180	33.3	0.0	0.0	chr15	68220772	68220816	(33770373)	C	MIRb	SINE/MIR	(198)	70	26	1337941
1671	17.6	6.0	0.0	chr15	68220834	68220994	(33770195)	C	AluJb	SINE/Alu	(10)	302	132	1337942
18	10.0	2.0	7.8	chr15	68328371	68328420	(33662769)	+	(GGTGGA)n	Simple_repeat	1	51	(0)	1338143
1954	9.8	7.1	0.0	chr15	69462458	69462732	(32528457)	C	AluSp	SINE/Alu	(17)	296	1	1340266
580	26.8	11.7	10.2	chr15	69976689	69977082	(32014107)	C	MLT1H2	LTR/ERVL-MaLR	(18)	471	71	1341247
290	19.5	12.9	5.2	chr15	69995869	69996003	(31995186)	+	MLT1K	LTR/ERVL-MaLR	176	322	(273)	1341288
16	18.8	4.5	2.2	chr15	70327764	70327807	(31663382)	+	(TC)n	Simple_repeat	1	46	(0)	1341953
261	20.5	9.3	2.5	chr15	70327863	70327942	(31663247)	C	MLT1K	LTR/ERVL-MaLR	(397)	198	113	1341954
23	18.2	3.6	0.0	chr15	70385143	70385198	(31605991)	+	(GGCCA)n	Simple_repeat	1	58	(0)	1342045
17	9.1	2.6	5.0	chr15	70493087	70493125	(31498064)	+	(CCCCA)n	Simple_repeat	1	40	(0)	1342252
2324	7.4	0.4	5.4	chr15	71524588	71524911	(30466278)	C	AluY	SINE/Alu	(0)	311	1	1343869
947	30.5	0.4	0.4	chr15	71525111	71525360	(30465829)	C	MIR	SINE/MIR	(0)	262	13	1343870
1821	11.4	8.2	0.7	chr15	71876149	71876420	(30114769)	C	AluSg	SINE/Alu	(15)	295	2	1344507
2141	12.0	0.0	0.0	chr15	71876426	71876728	(30114461)	C	AluSg	SINE/Alu	(0)	310	6	1344508
32	23.8	0.0	7.2	chr15	72319477	72319601	(29671588)	+	G-rich	Low_complexity	1	125	(0)	1345246
31	24.4	2.6	6.4	chr15	72319943	72320095	(29671094)	+	G-rich	Low_complexity	1	157	(0)	1345247
16	9.1	2.6	5.0	chr15	72320149	72320187	(29671002)	+	(CCCGAGC)n	Simple_repeat	1	40	(0)	1345248
524	30.4	2.3	9.3	chr15	72421249	72421582	(29569607)	+	MLT1H	LTR/ERVL-MaLR	52	361	(188)	1345441
557	23.8	2.3	0.0	chr15	72421705	72421830	(29569359)	+	L2a	LINE/L2	3298	3426	(0)	1345439
196	31.0	10.7	0.0	chr15	73683984	73684083	(28307106)	+	MIR1_Amn	SINE/MIR	9	120	(110)	1347536
16	16.8	0.0	0.0	chr15	73684186	73684212	(28306977)	+	G-rich	Low_complexity	1	27	(0)	1347537
12	26.9	0.0	4.1	chr15	73684332	73684380	(28306809)	+	(CCGGC)n	Simple_repeat	1	49	(0)	1347538
21	15.2	3.8	1.8	chr15	73684449	73684501	(28306688)	+	(CGGCG)n	Simple_repeat	1	55	(0)	1347539
26	23.2	1.6	0.8	chr15	74136550	74136624	(27854565)	+	G-rich	Low_complexity	1	75	(0)	1348315
19	12.0	2.8	0.0	chr15	74433806	74433841	(27557348)	+	(CAG)n	Simple_repeat	1	37	(0)	1348811
278	27.5	8.9	1.1	chr15	74546084	74546206	(27444983)	C	MIR3	SINE/MIR	(100)	130	3	1349060
1392	23.9	11.4	6.3	chr15	74709985	74710463	(27280726)	C	MLT1H	LTR/ERVL-MaLR	(1)	488	23	1349346
250	18.2	0.0	0.0	chr15	74736204	74736247	(27254942)	+	MLT1A	LTR/ERVL-MaLR	353	396	(0)	1349392
770	32.7	3.5	2.4	chr15	74736391	74736680	(27254509)	+	MLT1L	LTR/ERVL-MaLR	29	305	(305)	1349394
2655	11.0	0.7	4.1	chr15	74736681	74736814	(27254375)	+	L1MA3	LINE/L1	4954	5077	(1069)	1349395
19	21.5	1.5	4.5	chr15	74956809	74956873	(27034316)	+	(GCCCC)n	Simple_repeat	1	66	(0)	1349865
14	10.3	3.0	2.9	chr15	74956911	74956943	(27034246)	+	G-rich	Low_complexity	1	34	(0)	1349866
428	28.8	3.0	1.8	chr15	74956962	74957124	(27034065)	C	MamRep1879	DNA/hAT-Tip100?	(36)	180	16	1349867
204	38.8	4.0	0.9	chr15	75056014	75056209	(26934980)	C	L2a	LINE/L2	(92)	3334	3078	1350087
17	26.4	0.0	0.0	chr15	75647818	75647867	(26343322)	+	(CTCCTCC)n	Simple_repeat	1	50	(0)	1351301
12	11.6	3.3	3.2	chr15	75648019	75648048	(26343141)	+	(GGAC)n	Simple_repeat	1	31	(0)	1351302
313	33.0	7.0	6.1	chr15	75713456	75713652	(26277537)	C	MIRc	SINE/MIR	(68)	200	2	1351392
399	24.8	12.1	0.0	chr15	75713977	75714085	(26277104)	C	MIRc	SINE/MIR	(120)	148	25	1351393
752	23.3	12.8	0.8	chr15	75714101	75714316	(26276873)	+	MIRb	SINE/MIR	14	254	(14)	1351394
14	24.7	0.0	0.0	chr15	77632401	77632438	(24358751)	+	(CCT)n	Simple_repeat	1	38	(0)	1354378
16	0.0	0.0	0.0	chr15	77695883	77695899	(24295290)	+	(T)n	Simple_repeat	1	17	(0)	1354485
13	22.5	4.1	2.0	chr15	77695916	77695964	(24295225)	+	G-rich	Low_complexity	1	51	(0)	1354486
810	24.5	6.2	0.0	chr15	78360120	78360331	(23630858)	C	MIR	SINE/MIR	(0)	262	37	1355720
266	31.5	8.0	0.0	chr15	78549286	78549377	(23441812)	+	MLT1K	LTR/ERVL-MaLR	146	245	(350)	1356149
12	16.8	6.3	8.3	chr15	80059481	80059559	(21931630)	+	(TCCGGCC)n	Simple_repeat	1	84	(0)	1358903
367	31.7	11.4	4.6	chr15	80059764	80059958	(21931231)	+	L1MDb	LINE/L1	552	761	(5648)	1358904
211	37.6	10.9	2.7	chr15	80800926	80801144	(21190045)	+	L2c	LINE/L2	2919	3157	(230)	1360131
1308	22.6	10.6	10.1	chr15	80801159	80801704	(21189485)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	1360132
736	18.2	3.5	0.0	chr15	81828203	81828312	(20162877)	+	AluJo	SINE/Alu	1	114	(198)	1361864
22	14.2	0.0	0.0	chr15	82045632	82045670	(19945519)	+	(CCG)n	Simple_repeat	1	39	(0)	1362234
20	24.8	2.7	2.6	chr15	82810046	82810077	(19181112)	+	(GGCTGG)n	Simple_repeat	1	60	(17)	1363497
13	6.5	5.6	5.3	chr15	82810078	82810113	(19181076)	+	G-rich	Low_complexity	1	38	(0)	1363498
20	24.8	2.7	2.6	chr15	82810114	82810120	(19181069)	+	(GGCTGG)n	Simple_repeat	61	77	(0)	1363497
17	17.9	3.7	3.6	chr15	83447824	83447877	(18543312)	+	(GCGGAG)n	Simple_repeat	1	56	(0)	1364647
401	25.5	16.5	5.8	chr15	83448181	83448438	(18542751)	C	L2b	LINE/L2	(73)	3314	3024	1364648
233	22.9	1.6	0.0	chr15	84980664	84980724	(17010465)	C	MIR3	SINE/MIR	(77)	131	70	1367055
2226	23.6	5.3	1.8	chr15	85009670	85010291	(16980898)	+	L1ME3A	LINE/L1	5528	6172	(1)	1367111
27	3.3	0.0	0.0	chr15	89400142	89400172	(12591017)	+	(CCCCG)n	Simple_repeat	1	31	(0)	1374142
14	22.5	2.0	3.9	chr15	90872034	90872083	(11119106)	+	(GCC)n	Simple_repeat	1	51	(0)	1377287
2210	16.3	1.1	4.2	chr15	91535909	91536285	(10454904)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1378425
29	0.0	3.2	0.0	chr15	92694374	92694404	(9296785)	+	(GATA)n	Simple_repeat	1	32	(0)	1380244
13	12.7	2.6	5.1	chr15	93400759	93400796	(8590393)	+	GA-rich	Low_complexity	1	39	(0)	1381601
253	10.1	0.0	0.0	chr15	93400973	93401011	(8590178)	+	THE1A	LTR/ERVL-MaLR	1	39	(336)	1381602
10179	6.5	0.8	0.3	chr15	93401012	93403118	(8588071)	C	L1PA6	LINE/L1	(3)	6151	4036	1381603
17	3.7	3.3	3.2	chr15	96332040	96332069	(5659120)	+	(GCC)n	Simple_repeat	1	31	(0)	1385732
12	5.6	0.0	0.0	chr15	96332314	96332332	(5658857)	+	(AGC)n	Simple_repeat	1	19	(0)	1385733
17	5.0	0.0	0.0	chr15	96948060	96948080	(5043109)	+	(T)n	Simple_repeat	1	21	(0)	1386577
23	21.9	1.0	8.0	chr15	99565288	99565386	(2425803)	+	(CCCGC)n	Simple_repeat	1	100	(0)	1390312
16	17.5	5.5	3.5	chr15	99565477	99565531	(2425658)	+	(GGC)n	Simple_repeat	1	58	(0)	1390313
24	9.9	8.1	6.2	chr15	101766319	101766392	(224797)	+	(CT)n	Simple_repeat	1	80	(0)	1393237
14	26.7	0.0	3.5	chr16	54067	54123	(90284222)	+	G-rich	Low_complexity	1	57	(0)	1394122
290	21.1	0.0	5.0	chr16	54213	54292	(90284053)	+	MER96B	DNA/hAT-Tip100	31	106	(311)	1394123
1377	11.9	1.0	0.0	chr16	54355	54547	(90283798)	C	AluJr	SINE/Alu	(117)	195	1	1394124
563	25.7	3.3	6.0	chr16	54548	54708	(90283637)	+	MER96B	DNA/hAT-Tip100	101	247	(170)	1394125
21	4.2	7.1	6.7	chr16	680436	680491	(89657854)	+	G-rich	Low_complexity	1	60	(0)	1395074
12	20.8	0.0	2.9	chr16	721433	721467	(89616878)	+	(GCAGG)n	Simple_repeat	1	35	(0)	1395116
1790	13.2	5.8	0.3	chr16	1611226	1611520	(88726825)	+	AluJb	SINE/Alu	1	312	(0)	1396168
2471	8.1	0.3	0.0	chr16	1611534	1611840	(88726505)	+	AluSz	SINE/Alu	2	309	(3)	1396169
722	23.7	6.3	1.1	chr16	2010039	2010217	(88328128)	C	MER53	DNA/hAT	(4)	189	1	1396770
184	26.5	0.0	18.1	chr16	2026560	2026642	(88311703)	+	L2b	LINE/L2	3303	3370	(5)	1396809
30	22.8	2.1	3.0	chr16	2026755	2026851	(88311494)	+	G-rich	Low_complexity	1	99	(0)	1396810
13	21.1	2.6	0.0	chr16	2514189	2514226	(87824119)	+	G-rich	Low_complexity	1	39	(0)	1397556
652	0.0	0.0	0.0	chr16	3158922	3158993	(87179352)	+	tRNA-Pro-CCA	tRNA	1	72	(3)	1398615
920	13.7	1.9	0.0	chr16	3172927	3173079	(87165266)	C	AluSc	SINE/Alu	(22)	287	132	1398653
2123	9.1	0.0	1.7	chr16	3173081	3173376	(87164969)	C	AluSg	SINE/Alu	(18)	292	2	1398654
642	16.1	8.5	0.0	chr16	3221403	3221520	(87116825)	+	AluSx3	SINE/Alu	167	295	(16)	1398768
571	16.5	8.8	0.9	chr16	3221721	3221835	(87116510)	+	AluSx3	SINE/Alu	167	291	(20)	1398769
11	21.9	10.9	0.0	chr16	5097964	5098027	(85240318)	+	(GGTCCAG)n	Simple_repeat	1	71	(0)	1402556
19	26.5	0.0	5.1	chr16	5098644	5098722	(85239623)	+	G-rich	Low_complexity	1	79	(0)	1402557
423	31.8	10.6	4.4	chr16	5098950	5099153	(85239192)	C	L2c	LINE/L2	(3)	3423	3206	1402558
2458	11.3	11.0	0.5	chr16	10220324	10220706	(80117639)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1412948
13	17.7	3.1	0.0	chr16	10220832	10220863	(80117482)	+	(TTG)n	Simple_repeat	1	33	(0)	1412949
395	28.0	8.3	0.3	chr16	10220864	10221006	(80117339)	+	MIR3	SINE/MIR	15	165	(43)	1412950
87	21.3	2.3	4.2	chr16	11515565	11515822	(78822523)	+	GA-rich	Low_complexity	1	264	(0)	1415867
71	4.1	0.0	0.0	chr16	11515846	11515922	(78822423)	+	(GCCCA)n	Simple_repeat	1	77	(0)	1415868
512	29.0	4.5	1.4	chr16	12141183	12141357	(78196988)	C	MER20B	DNA/hAT-Charlie	(506)	277	94	1417327
3890	15.5	1.1	2.2	chr16	12141358	12141998	(78196347)	C	MER41B	LTR/ERV1	(0)	634	1	1417328
31	13.4	0.0	3.3	chr16	14071327	14071387	(76266958)	+	(GCG)n	Simple_repeat	1	61	(0)	1421471
24	29.2	0.0	5.8	chr16	14071388	14071446	(76266899)	+	G-rich	Low_complexity	1	120	(0)	1421472
13	7.6	1.5	7.6	chr16	14071539	14071573	(76266772)	+	G-rich	Low_complexity	1	32	(0)	1421473
574	35.9	9.4	1.6	chr16	14339813	14340383	(75997962)	C	L2a	LINE/L2	(1)	3425	2806	1421900
14	21.4	1.9	3.8	chr16	14340386	14340437	(75997908)	+	(TTTTTTA)n	Simple_repeat	1	53	(0)	1421901
19	3.4	0.0	5.9	chr16	15949515	15949548	(74388797)	+	(GCGGG)n	Simple_repeat	1	34	(0)	1425686
30	30.7	0.0	6.2	chr16	15949589	15949749	(74388596)	+	(GCC)n	Simple_repeat	1	161	(0)	1425687
588	23.7	2.3	6.6	chr16	16136908	16137088	(74201257)	C	MamRep38	DNA/hAT	(41)	254	82	1426174
595	24.7	12.9	3.0	chr16	16137208	16137498	(74200847)	C	MLT1H	LTR/ERVL-MaLR	(110)	439	81	1426175
19	10.8	5.0	0.0	chr16	16223522	16223561	(74114784)	+	(GGCTG)n	Simple_repeat	1	42	(0)	1426405
333	27.9	5.6	1.1	chr16	17361016	17361181	(72977164)	+	MLT1H	LTR/ERVL-MaLR	23	174	(375)	1428912
408	19.3	2.6	8.8	chr16	17361305	17361429	(72976916)	+	MLT1H	LTR/ERVL-MaLR	433	549	(0)	1428912
200	22.2	0.0	0.0	chr16	17361558	17361602	(72976743)	C	MIR	SINE/MIR	(2)	260	216	1428913
846	14.9	0.0	0.0	chr16	18804656	18804769	(71533576)	+	AluJo	SINE/Alu	1	114	(198)	1431982
758	19.9	0.0	0.7	chr16	18983534	18983669	(71354676)	C	FLAM_C	SINE/Alu	(8)	135	1	1432375
357	23.5	0.0	2.9	chr16	18983688	18983792	(71354553)	C	L1PA17	LINE/L1	(1)	6165	6064	1432376
18	10.8	0.0	0.0	chr16	18983990	18984019	(71354326)	+	(GGC)n	Simple_repeat	1	30	(0)	1432377
495	15.2	13.8	2.6	chr16	19010453	19010567	(71327778)	C	MLT1J1	LTR/ERVL-MaLR	(66)	382	253	1432445
1198	24.0	9.3	3.7	chr16	19010696	19011050	(71327295)	C	MLT1H	LTR/ERVL-MaLR	(110)	439	63	1432446
1196	26.0	6.4	12.2	chr16	19125510	19125945	(71212400)	+	MLT1H	LTR/ERVL-MaLR	145	545	(4)	1432754
1048	19.8	0.0	5.1	chr16	19126006	19126222	(71212123)	C	AluJo	SINE/Alu	(2)	310	105	1432756
733	19.7	0.8	0.7	chr16	19746981	19747125	(70591220)	+	FLAM_C	SINE/Alu	1	212	(90)	1434247
2042	20.4	7.8	2.6	chr16	19747122	19747492	(70590853)	C	MLT1H	LTR/ERVL-MaLR	(52)	497	103	1434246
1666	20.8	1.7	0.6	chr16	19747493	19747835	(70590510)	C	L1PB4	LINE/L1	(0)	6156	5810	1434248
2032	15.7	1.3	0.0	chr16	19902367	19902671	(70435674)	+	AluJr	SINE/Alu	1	309	(3)	1434639
954	30.4	6.7	1.4	chr16	19902672	19902967	(70435378)	C	L2a	LINE/L2	(208)	3218	2890	1434638
228	24.7	4.9	4.9	chr16	20240061	20240162	(70098183)	C	Charlie4z	DNA/hAT-Charlie	(22)	145	44	1435459
420	27.5	4.4	5.6	chr16	20240257	20240418	(70097927)	C	MLT1H	LTR/ERVL-MaLR	(194)	355	196	1435460
228	23.3	1.6	1.6	chr16	20240416	20240476	(70097869)	+	MLT1H	LTR/ERVL-MaLR	110	170	(379)	1435461
1977	12.9	1.8	0.0	chr16	21094389	21094668	(69243677)	+	AluSx	SINE/Alu	1	285	(27)	1437136
3377	22.3	3.9	4.2	chr16	21094669	21094707	(69243638)	+	L1ME1	LINE/L1	5481	5498	(681)	1437130
2572	11.3	0.6	0.3	chr16	21094708	21095070	(69243275)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1437137
329	25.7	11.4	1.1	chr16	22191689	22191869	(68146476)	+	MamTip1	DNA/hAT-Tip100	66	267	(0)	1439496
545	34.0	1.5	0.0	chr16	22683521	22683723	(67654622)	+	MIRb	SINE/MIR	54	259	(9)	1440588
267	33.3	0.0	3.9	chr16	22683737	22683864	(67654481)	+	7SK	RNA	10	132	(199)	1440589
544	33.1	17.4	3.9	chr16	25098216	25098772	(65239573)	+	L2	LINE/L2	2208	2844	(575)	1446196
624	21.5	5.7	13.1	chr16	25279592	25279896	(65058449)	+	MLT1H	LTR/ERVL-MaLR	116	396	(153)	1446652
2056	11.2	0.3	0.7	chr16	27204743	27205045	(63133300)	+	AluSz	SINE/Alu	1	302	(10)	1450615
293	29.4	1.2	2.0	chr16	28846883	28846991	(61491354)	+	MIRb	SINE/MIR	114	220	(10)	1454566
372	32.3	5.1	0.0	chr16	30096558	30096687	(60241658)	C	MIR	SINE/MIR	(70)	192	56	1457252
11	19.2	9.1	1.7	chr16	30400368	30400422	(59937923)	+	(CCCGGACA)n	Simple_repeat	1	60	(0)	1457932
15	7.0	2.9	5.7	chr16	30527310	30527343	(59811002)	+	(CTC)n	Simple_repeat	1	35	(0)	1458286
19	11.7	2.7	0.0	chr16	30893950	30893986	(59444359)	+	(CGGGGC)n	Simple_repeat	1	38	(0)	1459122
24	24.8	4.8	2.7	chr16	30894116	30894220	(59444125)	+	(CCGGC)n	Simple_repeat	1	110	(0)	1459123
210	31.6	7.3	5.8	chr16	30956924	30957044	(59381301)	+	MIR1_Amn	SINE/MIR	31	153	(77)	1459288
808	25.5	12.4	10.7	chr16	31273671	31274034	(59064311)	C	MLT1H	LTR/ERVL-MaLR	(16)	533	162	1460021
3217	15.9	8.6	2.9	chr16	31274035	31274585	(59063760)	C	LTR62	LTR/ERVL	(0)	709	110	1460022
184	27.9	6.8	0.0	chr16	31880836	31880903	(58457442)	C	L2c	LINE/L2	(49)	3338	3266	1460894
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
12	17.5	3.1	0.0	chr16	47038159	47038190	(43300155)	+	G-rich	Low_complexity	1	33	(0)	1466605
236	28.8	1.5	1.5	chr16	47038395	47038461	(43299884)	+	MIR	SINE/MIR	82	148	(114)	1466606
1169	22.9	9.3	3.8	chr16	47731315	47731709	(42606636)	C	MLT1H	LTR/ERVL-MaLR	(105)	444	26	1467566
388	17.3	2.8	8.2	chr16	48633254	48633403	(41704942)	C	7SLRNA	srpRNA	(8)	312	85	1469152
207	29.7	12.6	2.5	chr16	48633477	48633597	(41704748)	C	L2c	LINE/L2	(177)	3210	3076	1469153
517	19.8	6.2	0.0	chr16	48633611	48633716	(41704629)	+	BC200	scRNA	15	127	(73)	1469154
426	28.6	16.4	0.9	chr16	50584012	50584369	(39753976)	C	MLT1H2	LTR/ERVL-MaLR	(2)	547	70	1472783
272	28.3	11.7	0.0	chr16	50662453	50662558	(39675787)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	430	1472944
947	28.1	5.2	3.2	chr16	50662577	50662915	(39675430)	C	MLT1H	LTR/ERVL-MaLR	(203)	346	1	1472944
13	18.1	2.0	6.0	chr16	50742150	50742198	(39596147)	+	G-rich	Low_complexity	1	50	(0)	1473097
214	6.2	3.0	0.0	chr16	50742554	50742585	(39595760)	C	MIR1_Amn	SINE/MIR	(79)	151	119	1473098
1560	24.4	6.9	3.8	chr16	50883429	50883905	(39454440)	+	MLT1H	LTR/ERVL-MaLR	2	539	(10)	1473320
476	25.5	15.8	4.1	chr16	51313269	51313631	(39024714)	+	MLT1H	LTR/ERVL-MaLR	81	536	(13)	1474129
7022	21.4	3.3	9.3	chr16	52657519	52660180	(37678165)	+	L1MA5A	LINE/L1	1	2637	(4531)	1476363
237	35.0	5.7	2.1	chr16	52807689	52807875	(37530470)	+	L2c	LINE/L2	2964	3157	(230)	1476627
271	25.2	0.9	16.7	chr16	52807949	52808086	(37530259)	C	MLT1H2	LTR/ERVL-MaLR	(0)	549	376	1476628
2338	11.8	1.0	0.0	chr16	52808275	52808571	(37529774)	+	AluSc	SINE/Alu	1	300	(9)	1476629
809	23.3	17.0	14.4	chr16	54619957	54620442	(35717903)	C	MLT1H	LTR/ERVL-MaLR	(18)	531	31	1479856
463	30.2	7.1	7.3	chr16	55122755	55123189	(35215156)	+	MLT1H	LTR/ERVL-MaLR	1	536	(13)	1480801
328	16.7	19.2	0.0	chr16	55123216	55123299	(35215046)	C	MIR	SINE/MIR	(58)	204	101	1480802
250	35.9	10.3	0.6	chr16	55177770	55177926	(35160419)	C	MIRb	SINE/MIR	(18)	250	77	1480916
480	28.6	3.9	2.4	chr16	55177980	55178240	(35160105)	C	MLT1H2	LTR/ERVL-MaLR	(180)	369	68	1480917
376	27.9	8.3	0.6	chr16	55276204	55276369	(35061976)	C	MLT1H	LTR/ERVL-MaLR	(347)	202	23	1481119
1476	23.6	14.6	1.3	chr16	55458800	55459272	(34879073)	+	MLT1H	LTR/ERVL-MaLR	3	549	(0)	1481465
2244	11.5	0.7	0.3	chr16	55459304	55459607	(34878738)	+	AluSz	SINE/Alu	1	305	(7)	1481466
309	24.5	7.2	7.7	chr16	55465033	55465187	(34873158)	C	MER5A	DNA/hAT-Charlie	(3)	186	33	1481478
275	26.6	6.0	5.2	chr16	56317979	56318093	(34020252)	C	MER20B	DNA/hAT-Charlie	(665)	118	3	1482889
16	25.2	0.0	0.0	chr16	56318573	56318610	(34019735)	+	(TG)n	Simple_repeat	1	38	(0)	1482890
20	22.4	0.0	1.9	chr16	57486439	57486492	(32851853)	+	(GGCTCG)n	Simple_repeat	1	54	(0)	1485151
15	17.3	8.1	3.0	chr16	57486477	57486547	(32851798)	+	(GCTCC)n	Simple_repeat	1	74	(0)	1485152
13	19.4	6.1	1.9	chr16	57486520	57486568	(32851777)	+	(CGCCCGG)n	Simple_repeat	1	52	(0)	1485153
12	23.8	0.0	6.0	chr16	58001348	58001397	(32336948)	+	(CCGCC)n	Simple_repeat	1	50	(0)	1486244
29	0.0	0.0	0.0	chr16	58516125	58516152	(31822193)	+	(GGGGC)n	Simple_repeat	1	28	(0)	1487263
2189	6.3	1.4	2.8	chr16	58638056	58638340	(31700005)	C	AluSg	SINE/Alu	(16)	294	14	1487501
2487	13.7	13.0	3.0	chr16	58638341	58638693	(31699652)	+	LTR8B	LTR/ERV1	445	820	(0)	1487498
2498	11.5	8.2	1.5	chr16	65851989	65852385	(24485960)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	1498635
245	28.1	2.4	5.8	chr16	66134203	66134289	(24204056)	+	MER96	DNA/hAT-Tip100	1	84	(91)	1499153
2650	23.4	11.1	4.2	chr16	66699644	66700349	(23637996)	+	HAL1	LINE/L1	121	911	(1596)	1500239
16	26.2	2.0	2.0	chr16	66700374	66700422	(23637923)	+	(TA)n	Simple_repeat	1	50	(0)	1500241
13	15.2	0.0	3.2	chr16	66830711	66830741	(23507604)	+	(CCCGG)n	Simple_repeat	1	31	(0)	1500503
1938	17.1	3.2	3.0	chr16	67481516	67482239	(22856106)	+	MER51C	LTR/ERV1	1	640	(0)	1501694
2265	7.3	0.3	6.4	chr16	67816948	67817142	(22521203)	C	AluSc8	SINE/Alu	(1)	310	134	1502421
263	40.2	5.4	1.9	chr16	67893884	67894045	(22444300)	+	L2b	LINE/L2	2756	2923	(496)	1502545
13	24.9	2.0	2.0	chr16	69311577	69311625	(21026720)	+	G-rich	Low_complexity	1	50	(0)	1505548
17	8.9	5.3	2.5	chr16	69311879	69311920	(21026425)	+	(CTCCT)n	Simple_repeat	1	43	(0)	1505549
630	23.3	6.3	4.9	chr16	69312133	69312335	(21026010)	+	MIRb	SINE/MIR	54	259	(9)	1505550
13	14.0	4.7	4.4	chr16	69565635	69565677	(20772668)	+	(CTCTG)n	Simple_repeat	1	45	(0)	1506104
14	5.0	0.0	0.0	chr16	69565978	69565998	(20772347)	+	(GCG)n	Simple_repeat	1	21	(0)	1506105
810	14.3	9.3	1.7	chr16	69761836	69762013	(20576332)	+	MER53	DNA/hAT	1	193	(0)	1506512
290	25.4	14.3	8.8	chr16	69762014	69762047	(20576298)	+	L2a	LINE/L2	3397	3421	(5)	1506511
249	25.9	4.5	2.3	chr16	69762042	69762128	(20576217)	+	MIR	SINE/MIR	102	190	(72)	1506513
2899	21.1	4.5	7.6	chr16	71271173	71271537	(19066808)	+	L1MEf	LINE/L1	4644	4990	(1951)	1509371
266	28.1	5.8	2.9	chr16	71271593	71271715	(19066630)	C	L2c	LINE/L2	(159)	3216	3082	1509366
252	25.5	1.1	7.8	chr16	71519599	71519700	(18818645)	C	L2c	LINE/L2	(0)	3426	3332	1509838
310	24.4	23.0	5.8	chr16	71519874	71520047	(18818298)	C	MLT1H	LTR/ERVL-MaLR	(115)	434	222	1509839
2272	11.5	0.0	0.0	chr16	71520100	71520395	(18817950)	+	AluSz	SINE/Alu	1	296	(16)	1509840
2418	7.8	0.0	0.0	chr16	71565158	71565453	(18772892)	C	AluSg	SINE/Alu	(14)	296	1	1509920
377	35.3	6.4	6.4	chr16	74510695	74511087	(15827258)	C	L2b	LINE/L2	(12)	3363	2971	1514830
21	27.4	5.8	2.4	chr16	75566366	75566485	(14771860)	+	(CCGCTG)n	Simple_repeat	1	127	(0)	1517068
339	28.8	8.6	3.0	chr16	78792396	78792560	(11545785)	C	MLT1H	LTR/ERVL-MaLR	(355)	194	20	1522417
184	27.1	13.7	6.1	chr16	81730244	81730357	(8607988)	+	MamTip2	DNA/hAT-Tip100	182	305	(0)	1527883
900	26.1	14.3	2.6	chr16	82114358	82114739	(8223606)	C	MLT1H	LTR/ERVL-MaLR	(113)	436	3	1528680
800	28.7	9.0	4.2	chr16	82280723	82281082	(8057263)	C	MLT1H	LTR/ERVL-MaLR	(105)	444	66	1528957
379	22.9	12.2	10.1	chr16	82528145	82528343	(7810002)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	346	1529375
359	24.2	2.1	1.9	chr16	82528485	82528625	(7809720)	C	MLT1H	LTR/ERVL-MaLR	(389)	160	29	1529375
371	29.4	10.4	10.4	chr16	82740554	82740879	(7597466)	C	MLT1H	LTR/ERVL-MaLR	(197)	352	27	1529746
2191	24.0	2.2	3.2	chr16	84471388	84471633	(5866712)	+	L1MA4A	LINE/L1	675	918	(5931)	1532894
2653	8.7	2.4	1.9	chr16	84471634	84472006	(5866339)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1532895
231	30.0	9.1	1.0	chr16	84845489	84845589	(5492756)	C	MIR3	SINE/MIR	(37)	171	62	1533689
180	28.6	13.3	0.0	chr16	85010976	85011066	(5327279)	C	MIR3	SINE/MIR	(58)	150	46	1534007
18	25.4	1.4	4.2	chr16	85011296	85011366	(5326979)	+	(GGC)n	Simple_repeat	1	72	(0)	1534008
276	28.8	15.1	0.0	chr16	85168169	85168286	(5170059)	+	MIR	SINE/MIR	12	150	(112)	1534320
17	15.3	0.0	2.6	chr16	89657993	89658030	(680315)	+	G-rich	Low_complexity	1	38	(0)	1541616
23	7.0	4.1	3.9	chr17	144063	144111	(83113330)	+	(GGCGCGGC)n	Simple_repeat	1	51	(0)	1544683
313	28.1	4.7	0.0	chr17	1316381	1316462	(81940979)	C	L1ME4a	LINE/L1	(2)	6122	6037	1546827
12	22.5	3.9	7.4	chr17	2303520	2303559	(80953882)	+	G-rich	Low_complexity	1	68	(13)	1548855
15	17.7	0.0	0.0	chr17	2303560	2303591	(80953850)	+	GA-rich	Low_complexity	1	32	(0)	1548856
2337	7.8	0.3	1.7	chr17	2553873	2554168	(80703273)	C	AluSz	SINE/Alu	(20)	292	1	1549416
1822	13.7	2.7	0.0	chr17	4420203	4420495	(78836946)	C	AluSx4	SINE/Alu	(9)	301	1	1553036
982	15.6	0.0	0.6	chr17	4420526	4420685	(78836756)	+	AluJb	SINE/Alu	137	295	(17)	1553037
558	35.7	0.0	0.9	chr17	4420856	4421067	(78836374)	C	MamGypLTR3	LTR/Gypsy	(393)	501	292	1553038
2061	13.9	1.6	0.0	chr17	5292382	5292683	(77964758)	C	AluSx	SINE/Alu	(5)	307	1	1554846
1606	19.4	2.0	1.7	chr17	5292684	5292976	(77964465)	C	AluSz6	SINE/Alu	(13)	299	6	1554847
973	25.6	7.0	5.5	chr17	6192953	6193319	(77064122)	+	MLT1H	LTR/ERVL-MaLR	29	401	(148)	1556572
436	25.2	3.7	1.5	chr17	7865185	7865317	(75392124)	C	MIR	SINE/MIR	(62)	200	65	1559652
630	20.0	37.0	1.1	chr17	7865398	7865751	(75391690)	C	MLT1G1	LTR/ERVL-MaLR	(70)	509	3	1559653
648	1.4	0.0	0.0	chr17	8125746	8125817	(75131624)	+	tRNA-Gly-GGY	tRNA	1	72	(2)	1560137
13	17.6	0.0	6.8	chr17	8295543	8295586	(74961855)	+	(TCCGGC)n	Simple_repeat	1	44	(0)	1560494
2464	6.0	2.3	0.0	chr17	8295915	8296215	(74961226)	C	AluY	SINE/Alu	(3)	308	1	1560495
2240	12.2	0.0	0.7	chr17	8993992	8994294	(74263147)	+	AluSq2	SINE/Alu	1	301	(12)	1561854
2565	16.8	8.8	0.6	chr17	8994295	8994797	(74262644)	C	MER74A	LTR/ERVL	(10)	548	1	1561855
493	29.7	7.7	1.0	chr17	10884292	10884485	(72372956)	C	L2a	LINE/L2	(2955)	464	257	1565474
214	23.7	3.3	9.2	chr17	10884518	10884582	(72372859)	C	L2a	LINE/L2	(3284)	135	75	1565474
262	30.6	2.0	0.0	chr17	12020534	12020631	(71236810)	C	Charlie4z	DNA/hAT-Charlie	(14)	153	54	1567442
21	14.5	0.0	0.0	chr17	12020906	12020943	(71236498)	+	(GCG)n	Simple_repeat	1	38	(0)	1567443
1097	27.6	12.8	7.0	chr17	13518481	13518978	(69738463)	+	MLT1H	LTR/ERVL-MaLR	6	536	(13)	1569907
874	19.1	4.9	11.6	chr17	17418550	17418780	(65838661)	+	MLT1H	LTR/ERVL-MaLR	66	283	(266)	1576639
1825	14.1	2.0	2.7	chr17	17418951	17419247	(65838194)	+	AluSx	SINE/Alu	2	296	(16)	1576641
31	13.7	0.0	8.2	chr17	17496276	17496404	(65761037)	+	G-rich	Low_complexity	1	118	(0)	1576770
15	26.4	4.8	0.0	chr17	17496441	17496503	(65760938)	+	(GCCCC)n	Simple_repeat	1	66	(0)	1576771
316	33.3	9.8	0.6	chr17	17692656	17692812	(65564629)	+	MIRb	SINE/MIR	21	193	(75)	1577177
795	24.5	12.8	0.0	chr17	17806635	17806907	(65450534)	C	MLT1H	LTR/ERVL-MaLR	(198)	351	39	1577382
481	26.5	8.9	2.9	chr17	19647784	19648024	(63609417)	C	L2a	LINE/L2	(1123)	2296	2040	1581017
13	17.4	0.0	2.9	chr17	19648298	19648331	(63609110)	+	GA-rich	Low_complexity	1	34	(0)	1581022
453	21.4	15.9	4.4	chr17	21043779	21043983	(62213458)	C	Charlie5	DNA/hAT-Charlie	(24)	2600	2368	1583518
2173	11.5	0.3	2.0	chr17	21816582	21816885	(61440556)	C	AluSq2	SINE/Alu	(14)	299	1	1584823
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26935986	26936392	(56321049)	+	(GAATG)n	Satellite	1	409	(0)	1585984
1545	18.6	0.5	0.9	chr17	26938538	26939277	(56318164)	+	(GAATG)n	Satellite	3	736	(0)	1585994
437	12.7	3.1	0.0	chr17	26939289	26939351	(56318090)	+	AluSz6	SINE/Alu	225	289	(23)	1585995
1545	18.6	0.5	0.9	chr17	26939351	26939821	(56317620)	+	(GAATG)n	Satellite	4	474	(0)	1585996
377	19.1	1.6	0.0	chr17	26939822	26939884	(56317557)	+	AluYj4	SINE/Alu	224	287	(24)	1585997
256	28.4	8.5	0.0	chr17	28371168	28371300	(54886141)	+	MIR	SINE/MIR	84	235	(33)	1588526
13	12.2	8.3	0.0	chr17	28371488	28371523	(54885918)	+	G-rich	Low_complexity	1	39	(0)	1588527
12	15.8	0.0	3.3	chr17	28371698	28371727	(54885714)	+	(CCCAG)n	Simple_repeat	1	30	(0)	1588528
2203	12.8	0.3	0.6	chr17	28601133	28601444	(54655997)	C	AluSx	SINE/Alu	(1)	311	1	1588991
1082	13.7	5.5	8.0	chr17	28601445	28601498	(54655943)	+	MER33	DNA/hAT-Charlie	235	293	(31)	1588987
1587	16.8	0.0	0.4	chr17	28601520	28601757	(54655684)	C	AluSz	SINE/Alu	(75)	237	1	1588992
13	15.2	0.0	3.2	chr17	28744082	28744112	(54513329)	+	(CCCG)n	Simple_repeat	1	31	(0)	1589232
41	32.5	0.0	0.0	chr17	29293893	29294029	(53963412)	+	(TGG)n	Simple_repeat	1	137	(0)	1590288
18	10.5	0.0	0.0	chr17	29294512	29294543	(53962898)	+	(TGTTT)n	Simple_repeat	1	32	(0)	1590289
2231	10.4	1.6	0.0	chr17	30635191	30635487	(52621954)	+	AluY	SINE/Alu	1	302	(9)	1592876
847	12.7	0.0	0.0	chr17	30635572	30635681	(52621760)	+	AluJb	SINE/Alu	178	287	(25)	1592877
25035	6.4	3.0	0.1	chr17	31634266	31638526	(51618915)	+	HERVK9-int	LTR/ERVK	1637	6021	(0)	1594984
3926	5.9	3.7	0.0	chr17	31638527	31639019	(51618422)	+	MER9a3	LTR/ERVK	1	512	(0)	1594984
2349	11.2	0.0	0.0	chr17	32051200	32051510	(51205931)	+	AluY	SINE/Alu	1	311	(0)	1595926
836	12.7	0.0	0.0	chr17	32051596	32051705	(51205736)	+	AluJb	SINE/Alu	178	287	(25)	1595927
4295	20.2	10.7	2.7	chr17	32670470	32671405	(50586036)	+	LTR28	LTR/ERV1	1	1020	(0)	1597218
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
56	12.2	0.0	0.0	chr17	38256651	38256740	(45000701)	+	(GCCCCA)n	Simple_repeat	1	90	(0)	1607467
270	29.3	14.8	5.3	chr17	39212608	39212776	(44044665)	C	MIRc	SINE/MIR	(21)	187	2	1609555
584	28.7	14.4	2.5	chr17	39688303	39688624	(43568817)	+	L2a	LINE/L2	2617	2983	(436)	1610581
2194	7.8	0.0	1.1	chr17	41930882	41931194	(41326247)	C	AluSx3	SINE/Alu	(0)	311	1	1614596
197	16.9	7.1	2.6	chr17	42561692	42561760	(40695681)	+	MIR1_Amn	SINE/MIR	121	195	(73)	1615899
198	30.4	7.5	4.3	chr17	42561819	42561959	(40695482)	+	MIRc	SINE/MIR	30	175	(93)	1615900
301	4.2	0.0	0.0	chr17	43331803	43331850	(39925591)	+	AluY	SINE/Alu	254	301	(0)	1617609
1686	24.9	5.6	5.8	chr17	43331853	43332405	(39925036)	C	HERVK13-int	LTR/ERVK	(6632)	1484	933	1617608
444	27.2	8.9	1.3	chr17	44124298	44124542	(39132899)	+	L1M5	LINE/L1	5558	5823	(301)	1619261
16	20.5	4.5	4.3	chr17	44221524	44221590	(39035851)	+	(CCTCCTG)n	Simple_repeat	1	70	(0)	1619468
48	22.2	1.6	6.5	chr17	45784098	45784280	(37473161)	+	G-rich	Low_complexity	1	186	(0)	1622787
28	18.2	2.9	1.4	chr17	45784342	45784411	(37473030)	+	G-rich	Low_complexity	1	72	(0)	1622787
13	20.8	10.6	0.0	chr17	46192891	46192956	(37064485)	+	G-rich	Low_complexity	1	73	(0)	1623545
17	20.2	0.0	4.1	chr17	46193000	46193048	(37064393)	+	(GGCGGA)n	Simple_repeat	1	49	(0)	1623546
17	12.4	2.7	2.6	chr17	46193329	46193365	(37064076)	+	(CGG)n	Simple_repeat	1	38	(0)	1623547
15	8.7	0.0	0.0	chr17	46193431	46193455	(37063986)	+	(GAGC)n	Simple_repeat	1	25	(0)	1623548
12	18.9	7.1	0.0	chr17	46267019	46267060	(36990381)	+	(GCCTCA)n	Simple_repeat	1	45	(0)	1623747
238	21.4	15.7	0.0	chr17	47262842	47262911	(35994530)	C	MIR	SINE/MIR	(6)	256	174	1625686
271	34.6	1.9	0.9	chr17	47263060	47263164	(35994277)	C	MIR3	SINE/MIR	(86)	122	17	1625687
45	21.2	1.6	4.7	chr17	47531632	47531790	(35725651)	+	G-rich	Low_complexity	1	154	(0)	1626216
25	12.7	0.0	5.3	chr17	48492282	48492338	(34765103)	+	(ACCCCC)n	Simple_repeat	1	57	(0)	1627978
27	0.0	0.0	0.0	chr17	48636528	48636553	(34620888)	+	(T)n	Simple_repeat	1	26	(0)	1628167
426	31.6	3.6	5.9	chr17	48636898	48637099	(34620342)	C	MIRc	SINE/MIR	(50)	218	22	1628168
14	16.1	2.1	6.2	chr17	48817324	48817370	(34440071)	+	(CAGCC)n	Simple_repeat	1	48	(0)	1628551
365	28.5	11.3	0.6	chr17	48817498	48817663	(34439778)	+	MIRc	SINE/MIR	2	187	(81)	1628552
2065	14.6	5.7	0.8	chr17	49091194	49091546	(34165895)	C	THE1C	LTR/ERVL-MaLR	(4)	371	1	1629200
974	32.3	2.8	5.8	chr17	49091547	49091583	(34165858)	+	ERVL-E-int	LTR/ERVL	4302	4333	(1334)	1629195
1618	26.7	8.0	2.9	chr17	49091570	49092113	(34165328)	+	ERVL-E-int	LTR/ERVL	4010	4583	(1084)	1629195
658	2.7	0.0	0.0	chr17	49192528	49192600	(34064841)	+	tRNA-Gln-CAA	tRNA	1	73	(2)	1629400
12	27.2	2.0	2.0	chr17	49496637	49496686	(33760755)	+	(CGCGC)n	Simple_repeat	1	51	(0)	1630054
17	14.0	0.0	0.0	chr17	50479052	50479083	(32778358)	+	(GTGGCC)n	Simple_repeat	1	32	(0)	1631864
187	28.9	3.8	7.3	chr17	50479170	50479251	(32778190)	+	MIRb	SINE/MIR	36	114	(154)	1631865
6887	12.1	8.0	2.6	chr17	53686392	53687599	(29569842)	C	MER52C	LTR/ERV1	(0)	1278	1	1637073
230	23.1	4.4	1.5	chr17	55308584	55308649	(27948792)	C	MIRb	SINE/MIR	(165)	103	36	1639402
1149	23.4	10.5	3.8	chr17	55308814	55309160	(27948281)	C	MLT1H	LTR/ERVL-MaLR	(141)	408	36	1639403
13	25.2	2.7	6.5	chr17	55421817	55421891	(27835550)	+	(GGTCG)n	Simple_repeat	1	77	(0)	1639592
28	16.9	4.7	3.4	chr17	55421919	55422003	(27835438)	+	(CCTCCCG)n	Simple_repeat	1	89	(0)	1639593
12	10.2	0.0	10.3	chr17	55422139	55422177	(27835264)	+	G-rich	Low_complexity	1	39	(0)	1639594
1463	23.0	8.4	8.6	chr17	57196031	57196576	(26060865)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	5	1642863
935	22.0	4.1	11.1	chr17	57524002	57524343	(25733098)	C	MLT1H	LTR/ERVL-MaLR	(180)	369	53	1643419
1375	22.9	14.9	3.3	chr17	57732077	57732555	(25524886)	C	MLT1H	LTR/ERVL-MaLR	(4)	545	2	1643731
1695	7.5	5.0	0.4	chr17	57789449	57789676	(25467765)	+	7SK	RNA	1	239	(92)	1643839
381	22.8	8.7	4.9	chr17	57953546	57953688	(25303753)	+	Charlie4z	DNA/hAT-Charlie	1	149	(18)	1644190
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
39	9.5	0.0	0.0	chr17	58756097	58756154	(24501287)	+	(GAACCC)n	Simple_repeat	1	58	(0)	1645698
25	27.6	0.0	0.0	chr17	58756225	58756298	(24501143)	+	GA-rich	Low_complexity	1	74	(0)	1645699
17	29.8	2.5	1.2	chr17	58756310	58756388	(24501053)	+	(GCCGCC)n	Simple_repeat	1	81	(0)	1645700
14	24.1	0.0	0.0	chr17	58756637	58756675	(24500766)	+	(CCCGCC)n	Simple_repeat	1	39	(0)	1645701
1801	16.7	2.0	1.0	chr17	59124153	59124446	(24132995)	+	AluJb	SINE/Alu	1	297	(15)	1646488
1151	21.5	7.1	0.4	chr17	61135622	61135897	(22121544)	+	MER58B	DNA/hAT-Charlie	40	335	(6)	1650557
25	18.9	3.3	0.0	chr17	61135955	61136014	(22121427)	+	(GCT)n	Simple_repeat	1	62	(0)	1650558
13	26.3	0.0	0.0	chr17	61136005	61136045	(22121396)	+	(CCGCCA)n	Simple_repeat	1	41	(0)	1650559
16	16.5	0.0	0.0	chr17	61399951	61399984	(21857457)	+	(CCAGC)n	Simple_repeat	1	34	(0)	1651002
17	24.9	4.3	1.4	chr17	61400092	61400160	(21857281)	+	(CGCGCGC)n	Simple_repeat	1	72	(0)	1651003
1346	15.8	10.4	3.6	chr17	63129018	63129295	(20128146)	C	AluJo	SINE/Alu	(12)	300	2	1654289
627	32.6	3.0	0.5	chr17	63129304	63129497	(20127944)	+	MIR	SINE/MIR	29	227	(35)	1654290
15	16.7	2.4	2.3	chr17	63476529	63476570	(19780871)	+	(TCCCCCC)n	Simple_repeat	1	43	(0)	1654785
12	24.4	3.2	4.6	chr17	63476878	63476940	(19780501)	+	(CCCAGC)n	Simple_repeat	1	65	(0)	1654786
12	14.0	0.0	8.1	chr17	63476982	63477018	(19780423)	+	G-rich	Low_complexity	1	37	(0)	1654787
11	14.8	4.9	4.7	chr17	63741930	63741970	(19515471)	+	(GGCCGC)n	Simple_repeat	1	43	(0)	1655272
2457	10.3	4.5	0.8	chr17	64238451	64238811	(19018630)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1656133
480	29.0	12.7	0.5	chr17	64238957	64239150	(19018291)	C	MIRb	SINE/MIR	(7)	261	41	1656134
15	28.8	1.9	6.5	chr17	64975604	64975708	(18281733)	+	(ACGCC)n	Simple_repeat	1	107	(0)	1657692
2324	10.0	0.7	0.0	chr17	64976251	64976560	(18280881)	C	AluSx1	SINE/Alu	(0)	312	1	1657693
415	22.2	5.6	0.8	chr17	66304179	66304296	(16953145)	+	Charlie4z	DNA/hAT-Charlie	23	146	(21)	1660073
293	25.9	8.0	1.4	chr17	66304526	66304666	(16952775)	+	MamSINE1	SINE/tRNA-RTE	103	253	(37)	1660074
1190	22.8	6.8	7.5	chr17	66920935	66921396	(16336045)	+	MLT1H	LTR/ERVL-MaLR	1	499	(50)	1661058
306	30.8	15.9	1.6	chr17	68458177	68458364	(14799077)	C	MIRb	SINE/MIR	(22)	246	27	1664226
1570	25.2	4.2	3.1	chr17	68589022	68589442	(14667999)	+	MLT1H	LTR/ERVL-MaLR	117	542	(7)	1664458
1095	24.9	4.2	1.6	chr17	68589651	68590018	(14667423)	C	Charlie15b	DNA/hAT-Charlie	(0)	1061	684	1664459
2359	13.3	2.1	0.5	chr17	70032360	70032728	(13224713)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1666698
500	21.5	0.8	4.7	chr17	70895468	70895594	(12361847)	+	MLT1H	LTR/ERVL-MaLR	41	162	(387)	1667963
814	25.9	9.1	9.1	chr17	70895639	70896058	(12361383)	+	MLT1H	LTR/ERVL-MaLR	117	536	(13)	1667963
1132	23.7	12.6	3.6	chr17	72620355	72620801	(10636640)	C	MLT1H	LTR/ERVL-MaLR	(1)	548	56	1670703
2204	11.2	0.0	1.6	chr17	73094936	73095239	(10162202)	C	AluSz	SINE/Alu	(13)	299	1	1671613
557	25.3	1.0	10.6	chr17	73095240	73095273	(10162168)	+	L1MC5	LINE/L1	9276	9303	(1)	1671611
313	37.2	9.1	2.6	chr17	73095307	73095646	(10161795)	+	L2	LINE/L2	2651	3014	(405)	1671614
852	25.3	16.6	2.9	chr17	73682027	73682358	(9575083)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	156	1672771
230	28.7	12.6	0.6	chr17	74145736	74145903	(9111538)	C	LTR33	LTR/ERVL	(8)	507	317	1673568
590	22.0	11.0	0.0	chr17	74145939	74146124	(9111317)	C	LTR33	LTR/ERVL	(306)	209	1	1673568
472	28.5	7.8	8.3	chr17	74146164	74146381	(9111060)	+	L2a	LINE/L2	3208	3424	(2)	1673567
13	8.3	9.5	4.3	chr17	74432425	74432466	(8824975)	+	(CGCC)n	Simple_repeat	1	46	(0)	1674156
2666	9.3	2.2	0.0	chr17	74597336	74597691	(8659750)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1674434
315	25.0	1.1	0.0	chr17	74597778	74597869	(8659572)	+	L1M5	LINE/L1	5679	5771	(402)	1674435
374	33.6	9.2	2.6	chr17	74992955	74993187	(8264254)	+	L4_A_Mam	LINE/RTE-X	3328	3628	(1362)	1675136
1371	14.6	1.4	0.5	chr17	74993281	74993486	(8263955)	C	AluSx	SINE/Alu	(15)	297	90	1675137
2013	6.7	1.5	2.2	chr17	75905304	75905571	(7351870)	+	AluSc8	SINE/Alu	1	266	(45)	1676998
471	27.3	3.6	0.6	chr17	77233458	77233619	(6023822)	C	L2a	LINE/L2	(308)	3118	2952	1679690
299	31.2	6.1	10.7	chr17	77233707	77233997	(6023444)	+	MLT1J2	LTR/ERVL-MaLR	135	448	(0)	1679691
15	24.5	4.7	1.5	chr17	79009588	79009651	(4247790)	+	(GGCCGCG)n	Simple_repeat	1	67	(0)	1682840
23	11.2	0.0	0.0	chr17	79009696	79009734	(4247707)	+	(GGCTG)n	Simple_repeat	1	39	(0)	1682841
25	21.1	0.0	0.0	chr17	79009865	79009914	(4247527)	+	(T)n	Simple_repeat	1	50	(0)	1682842
29	19.7	5.1	2.9	chr17	80476464	80476561	(2780880)	+	(GCTCCG)n	Simple_repeat	1	103	(0)	1685066
62	8.7	0.0	0.0	chr17	81991546	81991633	(1265808)	+	(TCCCTGTCCA)n	Simple_repeat	1	88	(0)	1687028
12	23.8	2.2	2.1	chr17	82065754	82065799	(1191642)	+	G-rich	Low_complexity	1	47	(0)	1687089
13	19.4	4.9	0.0	chr17	82065901	82065941	(1191500)	+	(AGAGGTC)n	Simple_repeat	1	43	(0)	1687090
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
407	29.0	12.0	0.0	chr17	82552199	82552360	(705081)	C	L1MC4	LINE/L1	(0)	8042	7859	1687870
1390	21.8	7.9	1.4	chr17	83246582	83247135	(10306)	C	L1MC	LINE/L1	(2239)	5546	4952	1688732
167	14.0	0.3	2.0	chr17	83247136	83247436	(10005)	+	(GTTAGG)n	Simple_repeat	1	302	(0)	1688733
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
2389	9.5	0.0	1.6	chr18	700603	700917	(79672368)	+	AluSq2	SINE/Alu	1	310	(3)	1690264
1212	27.6	4.0	5.1	chr18	3552205	3552757	(76820528)	C	HAL1	LINE/L1	(1556)	951	405	1694612
1011	28.4	2.1	1.8	chr18	3552774	3553106	(76820179)	C	HAL1	LINE/L1	(2173)	334	1	1694612
641	26.8	11.5	0.0	chr18	7876418	7876671	(72496614)	C	MLT1H	LTR/ERVL-MaLR	(19)	530	244	1700692
1614	25.3	12.2	0.4	chr18	9359042	9359518	(71013767)	C	MLT1H	LTR/ERVL-MaLR	(8)	541	1	1702886
560	16.9	15.0	1.4	chr18	10526472	10526615	(69846670)	C	MER20	DNA/hAT-Charlie	(52)	167	1	1704653
250	22.5	0.0	14.4	chr18	10526701	10526804	(69846481)	+	L2c	LINE/L2	3294	3382	(5)	1704654
1821	19.3	5.3	5.7	chr18	11315715	11316627	(69056658)	C	L1M4	LINE/L1	(3556)	3088	2099	1705703
316	26.3	9.2	4.6	chr18	11316639	11316813	(69056472)	+	MLT1H2	LTR/ERVL-MaLR	290	473	(16)	1705704
20	21.8	1.3	6.3	chr18	12308129	12308206	(68065079)	+	G-rich	Low_complexity	1	79	(0)	1707182
16	17.8	7.2	4.0	chr18	12408288	12408356	(67964929)	+	(GCCGG)n	Simple_repeat	1	74	(0)	1707390
15	4.8	0.0	0.0	chr18	12948064	12948085	(67425200)	+	(CGC)n	Simple_repeat	1	22	(0)	1708433
448	24.6	0.6	0.4	chr18	13822909	13823988	(66549297)	+	(CAAC)n	Simple_repeat	1	1086	(0)	1709568
15	21.2	0.0	4.3	chr18	21111889	21111935	(59261350)	+	G-rich	Low_complexity	1	47	(0)	1711924
13	16.0	8.6	5.3	chr18	21704403	21704490	(58668795)	+	(CCCTGCG)n	Simple_repeat	1	90	(0)	1713146
17	18.7	2.5	8.6	chr18	21704672	21704750	(58668535)	+	G-rich	Low_complexity	1	81	(0)	1713147
18	22.1	1.6	4.7	chr18	22171630	22171692	(58201593)	+	(CGG)n	Simple_repeat	1	64	(0)	1714089
17	27.5	2.7	2.7	chr18	22171963	22172035	(58201250)	+	(CGG)n	Simple_repeat	1	75	(0)	1714090
24	20.8	3.3	0.0	chr18	24014886	24014946	(56358339)	+	(GCG)n	Simple_repeat	1	63	(0)	1717219
1325	24.6	12.2	3.6	chr18	26606426	26606840	(53766445)	+	MLT1H	LTR/ERVL-MaLR	76	515	(34)	1721203
372	35.0	9.8	5.5	chr18	26606877	26607028	(53766257)	+	L2c	LINE/L2	3036	3182	(205)	1721201
466	17.4	6.5	0.0	chr18	26696140	26696225	(53677060)	C	MLT1H	LTR/ERVL-MaLR	(453)	96	5	1721367
1299	20.6	17.9	0.3	chr18	29487271	29487606	(50885679)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	1725111
6192	15.8	2.1	0.9	chr18	29676795	29678305	(50694980)	+	L1PREC2	LINE/L1	6230	7761	(399)	1725344
824	9.6	0.0	0.0	chr18	29678307	29678421	(50694864)	+	THE1A	LTR/ERVL-MaLR	1	115	(240)	1725346
13	20.1	5.0	0.0	chr18	31942839	31942878	(48430407)	+	(CCGGC)n	Simple_repeat	1	42	(0)	1728479
7429	13.3	9.7	1.0	chr18	33863434	33864707	(46508578)	C	THE1D-int	LTR/ERVL-MaLR	(181)	1399	3	1731219
665	16.5	7.6	1.2	chr18	35289777	35289936	(45083349)	+	MER5A	DNA/hAT-Charlie	1	171	(18)	1733112
15	4.2	4.0	0.0	chr18	35376959	35376983	(44996302)	+	(CCGCG)n	Simple_repeat	1	26	(0)	1733224
2501	8.5	0.8	1.9	chr18	35576281	35576639	(44796646)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1733539
690	16.0	9.7	11.8	chr18	35576640	35576806	(44796479)	+	L1MD2	LINE/L1	5900	6065	(294)	1733538
3016	19.2	6.5	1.2	chr18	35971355	35972182	(44401103)	+	L1MB5	LINE/L1	5258	6174	(0)	1734073
13	8.6	0.0	6.9	chr18	35972700	35972728	(44400557)	+	(GCG)n	Simple_repeat	1	29	(0)	1734074
15	9.5	8.8	0.0	chr18	36297473	36297506	(44075779)	+	(GCC)n	Simple_repeat	1	37	(0)	1734614
17	25.6	0.0	3.4	chr18	48008319	48008377	(32364908)	+	G-rich	Low_complexity	1	59	(0)	1751162
13	27.6	4.1	2.6	chr18	48008366	48008375	(32364910)	+	(CGGCCC)n	Simple_repeat	1	22	(54)	1751163
13	17.6	2.4	4.7	chr18	48008376	48008417	(32364868)	+	(CCT)n	Simple_repeat	1	43	(0)	1751164
13	27.6	4.1	2.6	chr18	48008418	48008438	(32364847)	+	(CGGCCC)n	Simple_repeat	23	76	(0)	1751163
2266	12.1	1.6	2.8	chr18	55445269	55445669	(24927616)	C	THE1B	LTR/ERVL-MaLR	(0)	381	1	1762683
261	23.9	1.5	1.5	chr18	55445969	55446036	(24927249)	+	MLT1J	LTR/ERVL-MaLR	111	178	(334)	1762684
12	13.3	2.7	5.3	chr18	57083722	57083758	(23289527)	+	(GTTAGCA)n	Simple_repeat	1	38	(0)	1765024
16	24.2	3.3	1.6	chr18	75209091	75209150	(5164135)	+	(GCTCG)n	Simple_repeat	1	62	(0)	1790758
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
32	0.0	0.0	0.0	chr19	267223	267252	(58350364)	+	(CGCTG)n	Simple_repeat	1	30	(0)	1796658
28	23.0	6.9	4.1	chr19	489272	489430	(58128186)	+	(CCCCGAC)n	Simple_repeat	1	170	(0)	1797014
229	21.4	4.5	10.6	chr19	489656	489749	(58127867)	C	MER20	DNA/hAT-Charlie	(129)	90	3	1797015
1764	15.1	1.7	1.4	chr19	1103352	1103642	(57513974)	+	AluJb	SINE/Alu	13	304	(8)	1798232
2175	15.0	0.0	0.3	chr19	2346384	2346696	(56270920)	+	AluJo	SINE/Alu	1	312	(0)	1800588
15	10.7	3.0	2.9	chr19	2477744	2477776	(56139840)	+	GA-rich	Low_complexity	1	34	(0)	1800894
12	10.0	0.0	0.0	chr19	2624747	2624768	(55992848)	+	(GGGA)n	Simple_repeat	1	22	(0)	1801274
1802	17.8	0.7	1.3	chr19	2625074	2625371	(55992245)	C	AluJr4	SINE/Alu	(16)	296	1	1801275
15	21.2	0.0	4.3	chr19	3036342	3036388	(55581228)	+	(CTCC)n	Simple_repeat	1	47	(0)	1802227
191	30.0	0.0	0.0	chr19	3036691	3036740	(55580876)	+	MIR3	SINE/MIR	110	159	(49)	1802228
539	28.7	4.7	0.0	chr19	3849405	3849568	(54768048)	C	MER20	DNA/hAT-Charlie	(0)	219	48	1804156
17	20.1	1.6	6.2	chr19	4065353	4065416	(54552200)	+	(CCCCG)n	Simple_repeat	1	65	(0)	1804652
23	16.1	6.2	1.5	chr19	4065438	4065501	(54552115)	+	(CGG)n	Simple_repeat	1	68	(0)	1804653
606	25.9	18.5	2.9	chr19	5154076	5154460	(53463156)	C	L2	LINE/L2	(354)	3065	2607	1807251
1602	19.7	0.0	2.4	chr19	5516671	5516957	(53100659)	C	AluJo	SINE/Alu	(32)	280	1	1808214
603	28.9	2.7	11.7	chr19	5516966	5517227	(53100389)	+	MLT1H	LTR/ERVL-MaLR	216	455	(94)	1808215
1627	15.3	1.1	5.2	chr19	5517228	5517515	(53100101)	+	AluJb	SINE/Alu	1	276	(36)	1808216
18	14.7	0.0	0.0	chr19	6577481	6577510	(52040106)	+	(GT)n	Simple_repeat	1	30	(0)	1810619
374	30.1	15.3	7.2	chr19	6942175	6942579	(51675037)	+	MLT1H	LTR/ERVL-MaLR	1	444	(105)	1811623
227	27.7	2.4	5.7	chr19	6942566	6942653	(51674963)	+	MLT1H	LTR/ERVL-MaLR	389	473	(16)	1811623
87	24.7	2.5	2.4	chr19	7515625	7515904	(51101712)	+	(ACAGAG)n	Simple_repeat	1	287	(0)	1813126
12	29.4	4.8	0.0	chr19	7515875	7515936	(51101680)	+	G-rich	Low_complexity	1	65	(0)	1813127
36	21.4	0.6	5.6	chr19	8209047	8209140	(50408476)	+	G-rich	Low_complexity	1	89	(0)	1814706
31	22.6	2.1	7.5	chr19	8209176	8209318	(50408298)	+	(CCCCG)n	Simple_repeat	1	146	(0)	1814707
11	18.8	4.3	4.2	chr19	8209445	8209490	(50408126)	+	(CCCCGGC)n	Simple_repeat	1	48	(0)	1814708
12	10.1	8.3	5.8	chr19	8209546	8209593	(50408023)	+	(CGGCCC)n	Simple_repeat	1	52	(0)	1814709
2352	10.6	0.0	0.0	chr19	8374974	8375276	(50242340)	+	AluSx1	SINE/Alu	6	308	(4)	1815175
438	16.4	2.7	0.0	chr19	8375280	8375352	(50242264)	+	AluSx	SINE/Alu	1	75	(237)	1815176
1419	12.9	0.0	3.9	chr19	8375424	8375577	(50242039)	+	AluSx	SINE/Alu	88	241	(71)	1815176
10025	6.6	11.7	3.8	chr19	8375578	8377025	(50240591)	+	LTR12C	LTR/ERV1	3	1579	(0)	1815177
17	15.8	3.6	5.3	chr19	9310184	9310238	(49307378)	+	G-rich	Low_complexity	1	57	(0)	1817220
1340	13.7	6.4	16.1	chr19	9644498	9644881	(48972735)	C	THE1D	LTR/ERVL-MaLR	(37)	344	1	1817825
2079	13.6	0.3	0.0	chr19	9645051	9645344	(48972272)	C	AluSc	SINE/Alu	(14)	295	1	1817826
23	30.7	0.0	3.1	chr19	10420446	10420542	(48197074)	+	G-rich	Low_complexity	1	97	(0)	1819693
617	24.7	17.7	0.8	chr19	10552523	10552775	(48064841)	C	MLT1K	LTR/ERVL-MaLR	(118)	477	173	1820081
12	29.0	3.3	1.6	chr19	11355535	11355594	(47262022)	+	(GGC)n	Simple_repeat	1	62	(0)	1822121
18	18.3	3.3	4.8	chr19	11355676	11355736	(47261880)	+	G-rich	Low_complexity	1	63	(0)	1822122
2617	4.9	0.0	0.3	chr19	12649476	12649781	(45967835)	C	AluY	SINE/Alu	(6)	305	1	1824921
37	25.8	2.8	5.5	chr19	12838391	12838437	(45779179)	+	(CGC)n	Simple_repeat	1	56	(127)	1825335
15	11.6	0.0	0.0	chr19	12838438	12838465	(45779151)	+	(CCCTC)n	Simple_repeat	1	28	(0)	1825336
37	25.8	2.8	5.5	chr19	12838466	12838568	(45779048)	+	(CGC)n	Simple_repeat	57	183	(0)	1825335
1868	11.5	6.8	1.8	chr19	12920451	12920729	(45696887)	C	AluSz6	SINE/Alu	(7)	305	12	1825534
1074	14.6	2.9	14.6	chr19	12920730	12920805	(45696811)	+	MER39B	LTR/ERV1	423	501	(152)	1825533
299	12.8	0.0	0.0	chr19	12920806	12920844	(45696772)	+	AluSx1	SINE/Alu	133	171	(141)	1825535
555	17.7	2.0	0.0	chr19	12920846	12920941	(45696675)	+	AluSx3	SINE/Alu	204	301	(10)	1825536
765	17.1	1.9	1.9	chr19	12920943	12921103	(45696513)	+	MER39B	LTR/ERV1	493	653	(0)	1825533
23	21.1	3.3	0.0	chr19	13118318	13118404	(45499212)	+	(GCGGAG)n	Simple_repeat	1	89	(0)	1825909
620	26.2	7.1	7.0	chr19	13629953	13630341	(44987275)	+	MLT1H	LTR/ERVL-MaLR	6	538	(17)	1827321
1136	18.1	4.2	0.0	chr19	13630342	13630546	(44987070)	+	MLT2B2	LTR/ERVL	1	214	(301)	1827322
264	29.1	7.0	10.9	chr19	13755984	13756027	(44861589)	C	MIRc	SINE/MIR	(198)	70	26	1827711
579	28.6	13.7	2.3	chr19	13756403	13756667	(44860949)	C	MLT1H	LTR/ERVL-MaLR	(1)	548	249	1827713
32	26.9	5.6	3.2	chr19	13813452	13813615	(44804001)	+	GA-rich	Low_complexity	1	167	(0)	1827874
14	14.3	0.0	3.0	chr19	13850546	13850578	(44767038)	+	G-rich	Low_complexity	1	33	(0)	1827953
286	26.9	5.8	0.0	chr19	13850713	13850840	(44766776)	+	MIR	SINE/MIR	9	145	(63)	1827954
12	26.3	3.6	1.7	chr19	14418904	14418959	(44198657)	+	(CCCAGGC)n	Simple_repeat	1	58	(0)	1829441
14	21.8	0.0	0.0	chr19	14419033	14419069	(44198547)	+	(CCGAGCA)n	Simple_repeat	1	37	(0)	1829442
28	23.7	4.8	5.2	chr19	14690058	14690206	(43927410)	+	(GCGCG)n	Simple_repeat	1	148	(0)	1830169
1008	23.4	11.5	10.9	chr19	14825478	14825899	(43791717)	+	MLT1H	LTR/ERVL-MaLR	125	549	(0)	1830447
685	30.4	6.6	5.1	chr19	16463590	16464002	(42153614)	C	L2c	LINE/L2	(5)	3382	2961	1833978
969	11.2	1.4	2.2	chr19	16874270	16875902	(41741714)	+	(CTGGT)n	Simple_repeat	1	1655	(0)	1835001
13	16.1	4.4	4.3	chr19	17391851	17391895	(41225721)	+	GA-rich	Low_complexity	1	47	(0)	1836210
13	8.9	0.0	3.9	chr19	18572093	18572118	(40045498)	+	(GCCT)n	Simple_repeat	1	26	(0)	1839154
16	17.8	2.1	4.1	chr19	19664081	19664128	(38953488)	+	(GGCGG)n	Simple_repeat	1	49	(0)	1841381
1075	20.0	5.5	4.6	chr19	19733293	19733587	(38884029)	C	L1MB2	LINE/L1	(36)	6135	5829	1841529
698	22.1	2.9	0.8	chr19	30200438	30200654	(28416962)	+	L1MC4a	LINE/L1	7458	7704	(338)	1851520
313	11.1	0.0	0.0	chr19	30200666	30200719	(28416897)	+	L1MC4a	LINE/L1	7828	7881	(1)	1851528
856	31.1	8.7	8.0	chr19	30200738	30200876	(28416740)	+	MLT1I-int	LTR/ERVL-MaLR	569	706	(681)	1851529
12	11.5	10.0	2.3	chr19	30227662	30227701	(28389915)	+	(GCGA)n	Simple_repeat	1	44	(0)	1851577
19	4.0	0.0	0.0	chr19	30227737	30227762	(28389854)	+	(GCC)n	Simple_repeat	1	26	(0)	1851578
13	14.1	3.0	2.9	chr19	32692046	32692078	(25925538)	+	(CCG)n	Simple_repeat	1	34	(0)	1855320
12	13.4	4.2	8.0	chr19	32692415	32692462	(25925154)	+	(CCTGG)n	Simple_repeat	1	50	(0)	1855321
1810	11.2	8.4	1.1	chr19	32971398	32971674	(25645942)	+	AluJr	SINE/Alu	2	300	(12)	1855839
343	15.5	1.7	0.0	chr19	34712437	34712494	(23905122)	+	HUERS-P3-int	LTR/ERV1	38	96	(7322)	1859029
1458	20.7	4.2	6.5	chr19	34712488	34712828	(23904788)	+	HUERS-P3-int	LTR/ERV1	244	576	(6842)	1859029
3215	19.4	9.6	0.6	chr19	34712819	34713511	(23904105)	+	HUERS-P3-int	LTR/ERV1	718	1479	(7440)	1859029
17	29.1	3.1	1.5	chr19	35000120	35000184	(23617432)	+	(TC)n	Simple_repeat	1	67	(0)	1859480
14	11.7	0.0	3.3	chr19	35000393	35000417	(23617199)	+	(GCCCA)n	Simple_repeat	1	25	(0)	1859481
29	3.2	0.0	0.0	chr19	35000418	35000449	(23617167)	+	(GCCCT)n	Simple_repeat	1	32	(0)	1859482
1120	22.9	7.1	8.1	chr19	35216987	35217370	(23400246)	+	MLT1H	LTR/ERVL-MaLR	170	549	(0)	1859962
331	29.5	8.0	3.9	chr19	35217383	35217513	(23400103)	+	MIRb	SINE/MIR	88	231	(37)	1859963
1538	18.6	6.7	8.9	chr19	35217514	35217896	(23399720)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	1859964
447	29.8	0.7	6.2	chr19	35347503	35347663	(23269953)	+	MIRb	SINE/MIR	23	174	(94)	1860233
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
26	23.7	3.8	3.6	chr19	36272210	36272218	(22345398)	+	(CTGTCT)n	Simple_repeat	67	110	(0)	1862255
2031	14.6	0.0	0.0	chr19	36379389	36379690	(22237926)	C	AluJo	SINE/Alu	(10)	302	1	1862427
11	21.6	10.9	0.0	chr19	36528911	36528974	(22088642)	+	(TTGTGTGA)n	Simple_repeat	1	71	(0)	1862727
209	27.8	19.4	2.2	chr19	36916809	36916944	(21700672)	+	L2	LINE/L2	2042	2206	(1213)	1863510
229	14.3	0.0	0.0	chr19	36917310	36917344	(21700272)	C	MLT1H2	LTR/ERVL-MaLR	(376)	113	79	1863511
2087	12.5	0.3	0.0	chr19	37780548	37780835	(20836781)	C	AluSq2	SINE/Alu	(24)	289	1	1865095
1324	24.5	7.3	14.7	chr19	37780836	37781154	(20836462)	C	L1MA7	LINE/L1	(494)	5811	5546	1865094
254	20.7	1.7	0.0	chr19	38357086	38357143	(20260473)	+	MER91A	DNA/hAT-Tip100	2	60	(136)	1866494
1651	14.6	3.7	5.3	chr19	38357229	38357530	(20260086)	+	AluJr	SINE/Alu	1	297	(15)	1866495
1753	13.3	2.4	0.0	chr19	38440315	38440562	(20177054)	+	AluSz	SINE/Alu	59	312	(0)	1866672
1756	15.5	4.8	2.3	chr19	38783484	38783786	(19833830)	+	AluJo	SINE/Alu	1	311	(1)	1867437
248	36.5	14.1	1.6	chr19	39340884	39341633	(19275983)	+	L2	LINE/L2	2092	2950	(469)	1868894
270	31.2	7.9	5.5	chr19	40348058	40348271	(18269345)	C	MIRb	SINE/MIR	(0)	268	37	1870836
928	15.0	0.0	0.0	chr19	43594552	43594684	(15022932)	+	FLAM_C	SINE/Alu	1	133	(10)	1877191
1442	25.1	10.6	5.6	chr19	43628533	43629052	(14988564)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	1877275
12	28.7	0.0	2.1	chr19	43827533	43827580	(14790036)	+	G-rich	Low_complexity	1	48	(0)	1877783
18	8.5	0.0	0.0	chr19	45039357	45039381	(13578235)	+	(A)n	Simple_repeat	1	25	(0)	1880309
34	3.0	0.0	0.0	chr19	45341181	45341214	(13276402)	+	(TG)n	Simple_repeat	1	34	(0)	1881061
29	0.0	0.0	0.0	chr19	45341555	45341579	(13276037)	+	(GT)n	Simple_repeat	1	25	(0)	1881062
220	26.8	4.7	0.0	chr19	45639039	45639120	(12978496)	C	MIRb	SINE/MIR	(120)	148	63	1881868
12	12.6	0.0	3.6	chr19	45639451	45639478	(12978138)	+	(CCCGC)n	Simple_repeat	1	28	(0)	1881869
2208	13.3	3.3	7.1	chr19	46526328	46526706	(12090910)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1883915
2320	7.7	0.0	0.0	chr19	46948876	46949172	(11668444)	+	AluY	SINE/Alu	1	297	(14)	1884952
1885	24.4	6.0	3.0	chr19	46949173	46949248	(11668368)	+	L1ME1	LINE/L1	6105	6179	(0)	1884948
191	29.7	9.0	0.9	chr19	47648427	47648538	(10969078)	C	L2a	LINE/L2	(107)	3319	3198	1886682
552	9.2	1.3	0.0	chr19	47648591	47648666	(10968950)	+	AluSq10	SINE/Alu	1	77	(236)	1886683
2007	12.4	0.3	3.4	chr19	47648667	47648852	(10968764)	C	AluSz	SINE/Alu	(0)	312	137	1886684
2280	8.7	0.0	0.0	chr19	47648853	47649150	(10968466)	C	AluY	SINE/Alu	(13)	298	1	1886685
2257	6.8	0.3	7.1	chr19	48811958	48812147	(9805469)	+	AluSx1	SINE/Alu	137	305	(7)	1889667
1752	13.5	6.3	3.1	chr19	49095537	49095825	(9521791)	C	AluSz6	SINE/Alu	(12)	300	2	1890368
429	30.4	9.2	3.1	chr19	49095826	49095909	(9521707)	+	L2a	LINE/L2	3334	3414	(12)	1890356
13	8.5	4.0	0.0	chr19	49740207	49740231	(8877385)	+	(GCTGG)n	Simple_repeat	1	26	(0)	1891830
13	18.0	6.8	0.0	chr19	49808939	49808982	(8808634)	+	G-rich	Low_complexity	1	47	(0)	1891992
12	14.1	3.0	2.9	chr19	49818246	49818278	(8799338)	+	(CGCGCG)n	Simple_repeat	1	34	(0)	1892011
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
1627	11.3	2.2	0.0	chr19	50448808	50449029	(8168587)	C	AluSx	SINE/Alu	(85)	227	1	1893539
902	27.5	8.2	3.7	chr19	50449033	50449066	(8168550)	C	MLT1H	LTR/ERVL-MaLR	(34)	515	483	1893540
849	17.4	0.0	0.0	chr19	50449067	50449198	(8168418)	+	FLAM_C	SINE/Alu	1	132	(11)	1893541
902	27.5	8.2	3.7	chr19	50449199	50449650	(8167966)	C	MLT1H	LTR/ERVL-MaLR	(67)	482	5	1893540
458	15.1	0.8	4.9	chr19	50632018	50632192	(7985424)	+	MSR1	Satellite	1	167	(0)	1893968
673	14.1	1.2	2.0	chr19	51704496	51705028	(6912588)	+	MSR1	Satellite	1	528	(2)	1896078
410	27.3	0.6	4.2	chr19	55121508	55121675	(3495941)	+	MLT1J	LTR/ERVL-MaLR	350	511	(1)	1903044
504	19.9	1.2	16.1	chr19	55121785	55121875	(3495741)	+	MLT1H	LTR/ERVL-MaLR	387	466	(83)	1903045
2518	5.7	0.0	0.3	chr19	55121876	55122174	(3495442)	C	AluY	SINE/Alu	(13)	298	1	1903046
16	20.7	3.9	1.9	chr19	56404356	56404407	(2213209)	+	(CGGCCC)n	Simple_repeat	1	54	(0)	1905746
19	15.9	2.4	0.0	chr19	56595157	56595198	(2022418)	+	(GCTCG)n	Simple_repeat	1	43	(0)	1906049
938	16.5	15.7	2.1	chr19	56631020	56631261	(1986355)	+	MLT1B	LTR/ERVL-MaLR	2	282	(108)	1906120
836	27.1	10.5	4.0	chr19	56631261	56631614	(1986002)	+	MLT1H	LTR/ERVL-MaLR	168	547	(2)	1906121
545	34.4	4.6	0.3	chr19	57279572	57279886	(1337730)	+	L2a	LINE/L2	2201	2529	(890)	1907552
573	24.3	9.7	7.6	chr19	58322528	58322946	(294670)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	1909328
164	8.9	0.3	4.8	chr2	10175	10462	(242183067)	+	(ACCCTA)n	Simple_repeat	1	289	(0)	1910810
158	21.6	0.4	6.7	chr2	10463	10514	(242183015)	+	(CCCAAC)n	Simple_repeat	388	511	(0)	1910809
40	7.7	0.0	5.2	chr2	10516	10592	(242182937)	+	(ACCCTA)n	Simple_repeat	1	77	(0)	1910811
6455	13.9	14.4	5.6	chr2	10601	12198	(242181331)	C	TAR1	Satellite/telo	(218)	1893	132	1910812
250	11.1	2.2	0.0	chr2	2613547	2613591	(239579938)	C	L1M6	LINE/L1	(5901)	595	550	1913479
194	27.3	0.0	0.0	chr2	2613680	2613723	(239579806)	+	LFSINE_Vert	SINE/tRNA	358	401	(58)	1913480
270	29.7	9.6	12.8	chr2	4269862	4270274	(237923255)	+	MLT1H2	LTR/ERVL-MaLR	84	481	(8)	1915526
31	2.8	2.7	0.0	chr2	9556318	9556354	(232637175)	+	(CCCCGAG)n	Simple_repeat	1	38	(0)	1923168
21	14.1	3.3	4.8	chr2	10043495	10043554	(232149975)	+	(CCGCC)n	Simple_repeat	1	62	(0)	1924068
1956	11.8	7.0	1.4	chr2	10969449	10969800	(231223729)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	1925812
17	18.5	3.9	1.9	chr2	11746730	11746780	(230446749)	+	(GGCGG)n	Simple_repeat	1	53	(0)	1927197
346	23.9	4.4	2.5	chr2	11747131	11747266	(230446263)	C	MIRb	SINE/MIR	(124)	144	4	1927198
520	24.5	21.8	6.1	chr2	11907385	11907745	(230285784)	+	MLT1H	LTR/ERVL-MaLR	61	532	(17)	1927450
248	30.9	4.0	2.0	chr2	11907849	11907947	(230285582)	C	MIRb	SINE/MIR	(8)	260	160	1927451
13	16.9	0.0	8.5	chr2	17538994	17539040	(224654489)	+	(CCGCGCT)n	Simple_repeat	1	47	(0)	1936102
349	33.6	1.9	0.0	chr2	23921386	23921489	(218272040)	+	L4_B_Mam	LINE/RTE-X	4098	4203	(738)	1945104
239	26.2	4.7	0.0	chr2	24881030	24881090	(217312439)	+	MLT1H2	LTR/ERVL-MaLR	67	130	(359)	1946864
15	20.7	2.2	2.1	chr2	24881242	24881287	(217312242)	+	(AGCCC)n	Simple_repeat	1	47	(0)	1946865
276	35.5	0.8	3.2	chr2	24881373	24881497	(217312032)	C	L2c	LINE/L2	(227)	3160	3039	1946866
14	10.0	6.2	0.0	chr2	25041967	25041998	(217151531)	+	G-rich	Low_complexity	1	34	(0)	1947188
13	22.7	0.0	0.0	chr2	25342311	25342346	(216851183)	+	G-rich	Low_complexity	1	36	(0)	1947760
19	19.9	3.0	5.1	chr2	25982575	25982647	(216210882)	+	G-rich	Low_complexity	1	71	(0)	1949041
187	30.1	4.2	12.4	chr2	26344509	26344637	(215848892)	C	L2c	LINE/L2	(2)	3385	3268	1949787
1102	13.3	4.1	1.8	chr2	26344663	26344827	(215848702)	+	AluJb	SINE/Alu	115	283	(29)	1949788
20	13.8	0.0	7.3	chr2	27429023	27429077	(214764452)	+	G-rich	Low_complexity	1	55	(0)	1951815
14	31.9	0.0	0.0	chr2	27442515	27442568	(214750961)	+	(CCCGC)n	Simple_repeat	1	54	(0)	1951833
2597	11.5	0.3	4.3	chr2	30252059	30252380	(211941149)	+	THE1C	LTR/ERVL-MaLR	1	319	(56)	1956642
343	20.5	6.8	1.1	chr2	31074205	31074321	(211119208)	+	MIRc	SINE/MIR	25	159	(109)	1957929
1305	23.1	11.7	8.8	chr2	31074419	31074883	(211118646)	C	MLT1H	LTR/ERVL-MaLR	(48)	501	22	1957930
885	17.3	8.5	0.0	chr2	31258771	31258943	(210934586)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	1958246
319	22.4	1.5	0.0	chr2	31259282	31259348	(210934181)	+	MIRc	SINE/MIR	71	138	(130)	1958247
2042	16.7	0.0	2.2	chr2	32095450	32095761	(210097768)	+	AluJo	SINE/Alu	1	305	(7)	1959536
378	31.7	18.8	7.0	chr2	32095762	32096056	(210097473)	C	L2c	LINE/L2	(308)	3079	2756	1959535
22	23.4	1.6	1.6	chr2	32357248	32357347	(209836182)	+	(GGC)n	Simple_repeat	1	100	(0)	1960156
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
228	32.7	9.3	1.0	chr2	37763818	37764024	(204429505)	+	L1M7	LINE/L1	1104	1329	(4889)	1968216
897	30.1	5.1	2.1	chr2	37764041	37764458	(204429071)	+	MLT1H	LTR/ERVL-MaLR	111	541	(8)	1968217
1136	24.8	5.3	3.1	chr2	37764471	37764895	(204428634)	+	HAL1b	LINE/L1	1986	2420	(1)	1968218
256	28.1	6.6	9.9	chr2	38603925	38604066	(203589463)	+	L2c	LINE/L2	3247	3383	(4)	1969544
1967	9.8	7.4	0.0	chr2	45266782	45267055	(196926474)	C	AluSz6	SINE/Alu	(16)	296	1	1980452
910	23.5	15.6	4.0	chr2	45267157	45267528	(196926001)	+	MLT1H	LTR/ERVL-MaLR	23	445	(104)	1980453
651	33.0	5.9	0.3	chr2	45267607	45267861	(196925668)	+	MIRb	SINE/MIR	2	267	(1)	1980454
348	27.6	15.9	2.1	chr2	47638233	47638493	(194555036)	+	L2b	LINE/L2	2841	3151	(224)	1984442
727	21.3	9.7	0.7	chr2	47638496	47638707	(194554822)	C	MLT1H2	LTR/ERVL-MaLR	(2)	553	286	1984444
1573	10.0	17.6	0.4	chr2	47770996	47771244	(194422285)	C	AluSz6	SINE/Alu	(10)	302	2	1984766
848	23.7	11.5	7.1	chr2	47771245	47771620	(194421909)	C	MLT1H	LTR/ERVL-MaLR	(141)	408	18	1984764
2363	20.0	14.9	0.9	chr2	48047216	48047467	(194146062)	+	MLT2F	LTR/ERVL	5	316	(347)	1985287
54	3.7	0.0	0.0	chr2	48047468	48047522	(194146007)	+	(GT)n	Simple_repeat	1	55	(0)	1985290
2363	20.0	14.9	0.9	chr2	48047523	48047835	(194145694)	+	MLT2F	LTR/ERVL	317	663	(0)	1985287
4927	27.0	7.2	4.6	chr2	53526502	53527958	(188665571)	+	HAL1	LINE/L1	2	1490	(1017)	1992731
205	30.6	3.9	4.8	chr2	60630508	60630563	(181562966)	C	L2b	LINE/L2	(1)	3374	3321	2002701
2105	12.1	2.2	6.1	chr2	60630564	60630942	(181562587)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2002702
24	26.7	4.6	0.0	chr2	62195999	62196085	(179997444)	+	G-rich	Low_complexity	1	91	(0)	2006020
454	27.6	9.3	5.3	chr2	65830961	65831167	(176362362)	+	MIRb	SINE/MIR	53	268	(0)	2011975
633	31.0	14.1	1.6	chr2	67901010	67901284	(174292245)	C	MLT1H	LTR/ERVL-MaLR	(110)	439	133	2014723
2192	16.7	1.8	3.0	chr2	67901285	67901685	(174291844)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2014724
490	29.0	9.7	5.9	chr2	68077210	68077495	(174116034)	+	MLT1H	LTR/ERVL-MaLR	35	332	(217)	2014997
1550	19.8	4.4	6.3	chr2	68077613	68078010	(174115519)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	2014998
2196	13.7	1.9	2.7	chr2	68440324	68440690	(173752839)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2015615
2540	5.2	0.0	2.3	chr2	68447500	68447806	(173745723)	C	AluY	SINE/Alu	(11)	300	1	2015629
23	23.1	1.1	6.5	chr2	73112883	73113011	(169080518)	+	(CCGCC)n	Simple_repeat	1	122	(0)	2023102
2117	11.3	0.0	1.3	chr2	73204129	73204301	(168989228)	+	AluSx	SINE/Alu	134	306	(6)	2023325
1103	14.1	0.6	0.0	chr2	73204694	73204870	(168988659)	C	AluSx1	SINE/Alu	(1)	311	134	2023327
12	15.7	2.6	5.0	chr2	73984588	73984626	(168208903)	+	(GCCCC)n	Simple_repeat	1	40	(0)	2024577
14	16.6	2.3	4.4	chr2	73984798	73984841	(168208688)	+	(GCCCG)n	Simple_repeat	1	45	(0)	2024578
17	20.1	0.0	0.0	chr2	73984931	73984970	(168208559)	+	(TGCCGC)n	Simple_repeat	1	40	(0)	2024579
349	25.5	3.1	1.1	chr2	75277758	75277852	(166915677)	C	MIRb	SINE/MIR	(1)	267	171	2026724
735	28.1	11.8	8.2	chr2	75277936	75278303	(166915226)	C	MLT1H	LTR/ERVL-MaLR	(146)	403	21	2026725
587	27.8	13.3	3.5	chr2	80278281	80278631	(161914898)	C	MLT1H	LTR/ERVL-MaLR	(23)	526	102	2033507
23	18.5	0.0	0.0	chr2	85133230	85133277	(157060252)	+	(GT)n	Simple_repeat	1	48	(0)	2040181
19	15.0	6.2	4.3	chr2	85133338	85133404	(157060125)	+	(CCTC)n	Simple_repeat	1	68	(0)	2040182
12	28.1	1.9	1.9	chr2	85133482	85133534	(157059995)	+	(GCCGG)n	Simple_repeat	1	54	(0)	2040183
17	14.6	0.0	4.8	chr2	85133599	85133640	(157059889)	+	G-rich	Low_complexity	1	42	(0)	2040184
17	24.4	1.0	8.2	chr2	86623345	86623440	(155570089)	+	G-rich	Low_complexity	1	97	(0)	2042943
1916	8.1	4.5	1.7	chr2	87395792	87399574	(154793955)	+	(CCAAGCCAG)n	Simple_repeat	1	3954	(0)	2044189
11771	8.2	5.3	1.9	chr2	87405695	87431427	(154762102)	+	(AGCCAAGCC)n	Simple_repeat	1	27090	(0)	2044229
18	10.8	0.0	0.0	chr2	88055731	88055760	(154137769)	+	(CCG)n	Simple_repeat	1	30	(0)	2045205
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
2753	8.2	5.1	1.8	chr2	90287799	90293618	(151899911)	+	(CCAAGCCAG)n	Simple_repeat	1	6115	(0)	2048155
1179	7.9	5.0	1.0	chr2	90296392	90298617	(151894912)	+	(CCAAGCCAG)n	Simple_repeat	1	2337	(0)	2048172
33	12.8	3.3	0.0	chr2	90298620	90298639	(151894890)	+	GA-rich	Low_complexity	1	21	(0)	2048173
64	0.0	1.6	0.0	chr2	90298640	90298700	(151894829)	+	(GGAA)n	Simple_repeat	1	62	(0)	2048174
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
873	7.6	0.0	6.7	chr2	91498434	91499997	(150693532)	+	(GCTG)n	Simple_repeat	1	1564	(0)	2048409
544	10.4	0.0	7.0	chr2	91500007	91501095	(150692434)	+	(TGGC)n	Simple_repeat	1	1089	(0)	2048410
12120	9.1	4.5	1.3	chr2	91503835	91528906	(150664623)	+	(CTGGCTTGG)n	Simple_repeat	1	26197	(0)	2048427
946	16.2	0.0	4.6	chr2	96261275	96261447	(145932082)	C	AluJo	SINE/Alu	(11)	301	137	2051847
239	28.9	7.8	1.8	chr2	96637905	96638061	(145555468)	C	MIRc	SINE/MIR	(72)	196	27	2052487
21	23.3	1.2	5.9	chr2	96638090	96638178	(145555351)	+	(GGCCC)n	Simple_repeat	1	84	(0)	2052488
14	16.4	2.9	0.0	chr2	100321817	100321850	(141871679)	+	(CCGCG)n	Simple_repeat	1	35	(0)	2057712
13	0.0	0.0	0.0	chr2	100322059	100322075	(141871454)	+	(GGC)n	Simple_repeat	1	17	(0)	2057713
1410	23.7	3.6	4.2	chr2	101094773	101095222	(141098307)	+	L1MC3	LINE/L1	3	449	(5596)	2058966
392	23.3	7.0	7.7	chr2	102142164	102142293	(140051236)	C	MIR	SINE/MIR	(29)	233	105	2060701
298	27.3	12.9	5.2	chr2	105943855	105944047	(136249482)	+	MLT1H	LTR/ERVL-MaLR	23	232	(317)	2065694
15	18.3	0.0	2.6	chr2	105944183	105944221	(136249308)	+	(GCCCA)n	Simple_repeat	1	39	(0)	2065695
441	23.4	17.5	0.0	chr2	112666216	112666352	(129527177)	C	HAL1	LINE/L1	(34)	2473	2308	2075505
704	18.1	14.9	1.3	chr2	112666490	112666640	(129526889)	+	MER20	DNA/hAT-Charlie	45	219	(0)	2075506
1445	21.8	3.4	0.6	chr2	112666781	112667094	(129526435)	+	Tigger6b	DNA/TcMar-Tigger	2	324	(1273)	2075507
1898	14.1	0.7	3.6	chr2	112826807	112826962	(129366567)	+	AluJo	SINE/Alu	1	151	(161)	2075811
2207	13.4	11.0	0.8	chr2	112826963	112827346	(129366183)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2075812
253	29.5	18.7	1.6	chr2	120012494	120012679	(122180850)	+	L2a	LINE/L2	3130	3354	(72)	2086315
13	17.1	4.9	2.3	chr2	120314589	120314629	(121878900)	+	(CCTC)n	Simple_repeat	1	43	(0)	2086761
2475	21.8	7.1	3.0	chr2	120997184	120998050	(121195479)	+	L1MEf	LINE/L1	1401	2183	(4059)	2087867
747	19.4	7.9	3.6	chr2	120998062	120998087	(121195442)	+	MER58C	DNA/hAT-Charlie	14	39	(176)	2087868
2516	11.2	0.3	9.9	chr2	120998088	120998502	(121195027)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2087869
384	18.0	21.6	5.1	chr2	126971826	126972001	(115221528)	+	MLT1H2	LTR/ERVL-MaLR	277	489	(0)	2096674
335	31.1	4.2	0.7	chr2	127165285	127165420	(115028109)	+	L2	LINE/L2	2670	2810	(609)	2096986
262	19.0	2.7	26.5	chr2	127165487	127165780	(115027749)	+	MLT1H	LTR/ERVL-MaLR	263	484	(65)	2096987
2423	6.7	3.2	0.0	chr2	127804040	127804337	(114389192)	+	AluY	SINE/Alu	1	308	(3)	2098023
308	29.3	14.9	6.0	chr2	127804338	127804475	(114389054)	+	L1MC4	LINE/L1	7654	7805	(237)	2098022
559	27.9	8.7	3.4	chr2	127804508	127804979	(114388550)	+	L1MC4	LINE/L1	7773	8037	(5)	2098022
19	6.5	3.1	0.0	chr2	127886610	127886641	(114306888)	+	(CCTCG)n	Simple_repeat	1	33	(0)	2098185
20	20.1	2.5	9.9	chr2	130836822	130836939	(111356590)	+	G-rich	Low_complexity	1	121	(0)	2102408
571	23.4	1.7	5.6	chr2	131682921	131683079	(110510450)	C	L1M3	LINE/L1	(524)	5627	5483	2103607
906	15.3	0.0	0.0	chr2	133630464	133630607	(108562922)	+	L1PA10	LINE/L1	6015	6158	(10)	2106208
297	24.5	2.9	3.8	chr2	133630626	133630731	(108562798)	+	MLT1H	LTR/ERVL-MaLR	217	321	(228)	2106205
543	28.9	4.5	0.4	chr2	133630930	133631186	(108562343)	+	L1ME4a	LINE/L1	5658	5925	(199)	2106202
3690	16.2	3.6	4.3	chr2	134591901	134592721	(107600808)	C	MER4D	LTR/ERV1	(0)	900	4	2107612
15	18.3	0.0	2.6	chr2	135531567	135531621	(106661908)	+	(CCCGC)n	Simple_repeat	1	53	(0)	2109150
17	15.5	4.7	0.0	chr2	135531859	135531901	(106661628)	+	(GGCTGC)n	Simple_repeat	1	45	(0)	2109151
13	23.3	0.0	0.0	chr2	135532005	135532039	(106661490)	+	(GCT)n	Simple_repeat	1	35	(0)	2109152
17	0.0	3.2	6.2	chr2	138501746	138501781	(103691748)	+	(GCC)n	Simple_repeat	1	34	(0)	2113519
15	21.8	4.8	3.1	chr2	138501781	138501842	(103691687)	+	(CGGAGC)n	Simple_repeat	1	65	(0)	2113520
18	25.0	3.2	1.5	chr2	138501836	138501898	(103691631)	+	(GCG)n	Simple_repeat	1	65	(0)	2113521
2416	10.1	0.0	0.0	chr2	138863259	138863566	(103329963)	+	AluSg	SINE/Alu	2	309	(1)	2114068
1635	13.1	1.2	0.4	chr2	138863658	138863895	(103329634)	C	7SK	RNA	(91)	240	1	2114069
565	29.1	9.1	7.3	chr2	147665183	147665526	(94528003)	C	MLT1H	LTR/ERVL-MaLR	(194)	355	5	2125558
40	0.0	0.0	0.0	chr2	149038942	149038978	(93154551)	+	(CGCGGGGC)n	Simple_repeat	1	37	(0)	2127513
2999	27.3	8.7	2.0	chr2	151335598	151336967	(90856562)	+	HAL1	LINE/L1	146	1615	(892)	2130693
193	32.4	10.2	1.9	chr2	151409614	151409720	(90783809)	+	MIRc	SINE/MIR	22	138	(130)	2130856
21	9.5	0.0	0.0	chr2	151409773	151409806	(90783723)	+	(GGGAA)n	Simple_repeat	1	34	(0)	2130857
36	22.2	1.2	0.0	chr2	152098738	152098822	(90094707)	+	GA-rich	Low_complexity	1	86	(0)	2131855
26	17.8	0.0	3.3	chr2	152098885	152098945	(90094584)	+	GA-rich	Low_complexity	1	61	(0)	2131855
5587	16.2	3.2	1.6	chr2	153455326	153456284	(88737245)	C	LTR1D	LTR/ERV1	(0)	975	1	2133753
1519	9.3	6.9	3.2	chr2	157298830	157298934	(84894595)	C	7SK	RNA	(41)	290	183	2138567
51	2.0	0.0	0.0	chr2	157298935	157298985	(84894544)	+	(CGGAAGAC)n	Simple_repeat	1	51	(0)	2138568
1519	9.3	6.9	3.2	chr2	157298986	157299158	(84894371)	C	7SK	RNA	(149)	182	2	2138567
207	30.6	7.5	2.0	chr2	157299174	157299273	(84894256)	+	MIR	SINE/MIR	147	252	(10)	2138569
23	32.0	0.0	2.2	chr2	157876292	157876383	(84317146)	+	GA-rich	Low_complexity	1	92	(0)	2139335
21	4.2	0.0	0.0	chr2	159712088	159712112	(82481417)	+	(A)n	Simple_repeat	1	25	(0)	2142018
12	16.9	2.9	2.8	chr2	159712267	159712301	(82481228)	+	(GCCA)n	Simple_repeat	1	36	(0)	2142019
32	3.0	0.0	0.0	chr2	160493445	160493478	(81700051)	+	(CGG)n	Simple_repeat	1	34	(0)	2143159
12	5.6	0.0	0.0	chr2	160493479	160493497	(81700032)	+	(TGC)n	Simple_repeat	1	19	(0)	2143160
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
1904	12.6	3.7	2.4	chr2	161309874	161310166	(80883363)	+	AluSx3	SINE/Alu	1	297	(14)	2144257
278	20.0	1.6	1.6	chr2	164094433	164094493	(78099036)	C	MLT1H	LTR/ERVL-MaLR	(143)	406	346	2147868
200	30.4	1.8	0.0	chr2	164094527	164094582	(78098947)	+	L2b	LINE/L2	3102	3158	(217)	2147869
4815	21.7	2.0	2.2	chr2	164094678	164095783	(78097746)	C	L1MD3	LINE/L1	(3)	7992	6889	2147870
236	28.1	9.9	1.2	chr2	170147616	170147698	(72045831)	C	MLT1H	LTR/ERVL-MaLR	(39)	372	282	2156197
893	28.1	8.9	3.3	chr2	170147674	170148034	(72045495)	C	MLT1H	LTR/ERVL-MaLR	(166)	383	1	2156197
461	31.6	3.9	4.4	chr2	174039524	174039728	(68153801)	C	MIRc	SINE/MIR	(39)	229	26	2162612
323	30.5	2.3	0.8	chr2	174040167	174040295	(68153234)	+	L1M5	LINE/L1	4951	5081	(1065)	2162613
468	28.2	3.4	5.0	chr2	177750884	177751062	(64442467)	C	MER5B	DNA/hAT-Charlie	(2)	176	1	2168042
1102	24.9	14.1	1.3	chr2	179922960	179923594	(62269935)	C	L1ME2	LINE/L1	(3)	6956	6240	2170825
396	27.0	2.1	0.0	chr2	179923586	179923718	(62269811)	C	L1ME2	LINE/L1	(2435)	4506	4368	2170825
14	30.1	1.6	1.6	chr2	182716123	182716185	(59477344)	+	(CGCCAC)n	Simple_repeat	1	64	(0)	2174385
14	14.9	2.4	4.8	chr2	188291953	188291993	(53901536)	+	G-rich	Low_complexity	1	42	(0)	2181474
17	3.2	5.9	2.8	chr2	189784481	189784514	(52409015)	+	(GCGGGT)n	Simple_repeat	1	36	(0)	2183366
11	24.0	4.5	0.0	chr2	190344130	190344173	(51849356)	+	(GGCCCC)n	Simple_repeat	1	46	(0)	2184208
1161	29.6	14.0	4.7	chr2	191014554	191015588	(51177941)	+	L2b	LINE/L2	2006	3156	(219)	2185231
1649	16.9	10.7	6.1	chr2	195143878	195144286	(47049243)	+	LTR47A	LTR/ERVL	3	439	(13)	2190518
1972	14.4	6.9	2.9	chr2	195144287	195144635	(47048894)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2190519
23	21.9	0.0	0.0	chr2	196926620	196926672	(45266857)	+	(GCC)n	Simple_repeat	1	53	(0)	2193088
13	15.0	9.1	3.3	chr2	196926746	196926800	(45266729)	+	(GCGCCT)n	Simple_repeat	1	60	(0)	2193089
770	27.1	12.6	1.5	chr2	197142444	197142773	(45050756)	+	MARNA	DNA/TcMar-Mariner	40	411	(175)	2193451
968	15.0	0.7	0.0	chr2	197142858	197142990	(45050539)	+	FLAM_C	SINE/Alu	1	134	(9)	2193452
17	15.9	0.0	0.0	chr2	197310728	197310762	(44882767)	+	(CCTCCT)n	Simple_repeat	1	35	(0)	2193752
12	11.1	6.9	0.0	chr2	197310864	197310892	(44882637)	+	(CGCT)n	Simple_repeat	1	31	(0)	2193753
32	22.4	6.0	3.8	chr2	197310893	197311012	(44882517)	+	(CCGCCGC)n	Simple_repeat	2	159	(0)	2193754
1129	32.1	6.8	4.7	chr2	202741833	202742802	(39450727)	+	L1M5	LINE/L1	4277	5288	(858)	2202628
8179	18.9	4.5	1.8	chr2	202742817	202744152	(39449377)	+	L1M2	LINE/L1	1623	3098	(4468)	2202631
322	18.5	0.0	0.0	chr2	204513839	204513903	(37679626)	+	MLT1H	LTR/ERVL-MaLR	13	77	(472)	2205726
258	32.7	0.0	1.0	chr2	204513928	204514029	(37679500)	+	MLT1H	LTR/ERVL-MaLR	86	186	(303)	2205726
530	25.6	0.0	6.5	chr2	204514101	204514284	(37679245)	+	MLT1H	LTR/ERVL-MaLR	378	549	(0)	2205726
286	30.6	15.4	0.0	chr2	208444049	208444218	(33749311)	+	MLT1H	LTR/ERVL-MaLR	1	201	(348)	2211870
479	23.8	5.8	3.0	chr2	208444224	208444357	(33749172)	+	MLT1H	LTR/ERVL-MaLR	402	539	(10)	2211870
52	0.0	0.0	0.0	chr2	210171296	210171342	(32022187)	+	(GCC)n	Simple_repeat	1	47	(0)	2214032
2114	12.9	0.7	0.3	chr2	215288853	215289161	(26904368)	+	AluSx1	SINE/Alu	1	310	(2)	2220850
1556	23.8	5.1	4.1	chr2	215613212	215613698	(26579831)	C	L1M2b	LINE/L1	(6705)	504	13	2221374
16	6.3	5.7	2.7	chr2	216081863	216081897	(26111632)	+	(CCCGG)n	Simple_repeat	1	37	(0)	2222151
16	19.6	0.0	0.0	chr2	216082042	216082071	(26111458)	+	A-rich	Low_complexity	1	30	(0)	2222152
211	27.5	15.8	0.0	chr2	216299607	216299675	(25893854)	+	MIRb	SINE/MIR	12	93	(175)	2222489
745	27.8	7.8	3.0	chr2	216299713	216300115	(25893414)	C	MLT1H2	LTR/ERVL-MaLR	(31)	458	1	2222490
19	9.2	2.7	2.6	chr2	218217198	218217234	(23976295)	+	(GCG)n	Simple_repeat	1	38	(0)	2225668
13	25.0	5.3	3.8	chr2	218292381	218292456	(23901073)	+	(GCCCCG)n	Simple_repeat	1	80	(0)	2225782
13	15.9	0.0	0.0	chr2	218292519	218292546	(23900983)	+	G-rich	Low_complexity	1	28	(0)	2225783
674	22.8	18.9	12.6	chr2	218909457	218909862	(23283667)	+	Arthur1B	DNA/hAT-Tip100	14	451	(774)	2227017
777	24.1	8.8	4.5	chr2	219987921	219988337	(22205192)	+	MLT1H2	LTR/ERVL-MaLR	49	524	(25)	2228832
884	15.9	0.0	0.8	chr2	219988383	219988508	(22205021)	C	FLAM_A	SINE/Alu	(16)	126	2	2228833
19	17.3	4.7	4.5	chr2	220160785	220160848	(22032681)	+	(TTA)n	Simple_repeat	1	67	(0)	2229119
550	22.2	6.0	16.1	chr2	220160860	220161138	(22032391)	C	MLT1H	LTR/ERVL-MaLR	(165)	384	136	2229120
2293	13.2	3.8	1.4	chr2	220887034	220887388	(21306141)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2230214
10121	11.8	3.1	3.8	chr2	220925551	220927139	(21266390)	C	THE1B-int	LTR/ERVL-MaLR	(2)	1578	1	2230272
1432	22.2	3.6	3.9	chr2	221035526	221035914	(21157615)	+	MLT1B	LTR/ERVL-MaLR	3	390	(0)	2230427
13	33.0	0.0	0.0	chr2	221036032	221036084	(21157445)	+	(ATCTG)n	Simple_repeat	1	53	(0)	2230428
645	30.3	8.4	9.0	chr2	221070379	221070706	(21122823)	+	MLT1H	LTR/ERVL-MaLR	105	408	(141)	2230484
1678	17.0	5.9	3.5	chr2	221070707	221071072	(21122457)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2230485
876	24.5	18.1	6.1	chr2	222360054	222360531	(19832998)	+	MLT1H	LTR/ERVL-MaLR	2	549	(0)	2232475
1176	22.7	12.8	4.5	chr2	222627141	222627625	(19565904)	+	MLT1H	LTR/ERVL-MaLR	15	545	(4)	2232882
614	18.7	9.4	2.9	chr2	222745399	222745536	(19447993)	C	MER110	LTR/ERV1	(343)	148	1	2233108
21	19.6	0.0	0.0	chr2	222745886	222745926	(19447603)	+	(CA)n	Simple_repeat	1	41	(0)	2233109
14	21.2	4.6	4.4	chr2	222860758	222860822	(19332707)	+	(CCCGCT)n	Simple_repeat	1	68	(0)	2233361
12	15.5	3.5	0.0	chr2	222860880	222860908	(19332621)	+	(CGCGC)n	Simple_repeat	1	30	(0)	2233362
899	14.2	0.0	1.5	chr2	223732962	223733095	(18460434)	C	FLAM_C	SINE/Alu	(11)	132	1	2234739
440	34.4	8.0	6.7	chr2	223733259	223733587	(18459942)	C	L2a	LINE/L2	(422)	2997	2663	2234738
230	26.0	6.1	8.3	chr2	224123371	224123454	(18070075)	C	MLT1H	LTR/ERVL-MaLR	(33)	456	375	2235418
1046	27.9	2.7	0.0	chr2	224123581	224123870	(18069659)	C	MLT1H	LTR/ERVL-MaLR	(251)	298	1	2235418
1423	25.8	11.1	4.0	chr2	224217952	224218451	(17975078)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	10	2235575
2247	8.4	6.2	0.0	chr2	224356833	224357119	(17836410)	+	AluY	SINE/Alu	2	307	(4)	2235781
422	31.0	14.2	0.7	chr2	226311949	226312234	(15881295)	C	MLT1H	LTR/ERVL-MaLR	(16)	533	203	2238728
401	26.4	11.8	1.6	chr2	227175745	227175933	(15017596)	+	MamRep4096	DNA/hAT-Tip100	102	312	(114)	2240030
215	18.6	18.1	0.0	chr2	227471934	227471992	(14721537)	+	MIR	SINE/MIR	191	262	(0)	2240574
13	5.3	0.0	0.0	chr2	227472177	227472196	(14721333)	+	(GGC)n	Simple_repeat	1	20	(0)	2240577
2363	9.9	0.0	0.3	chr2	230056253	230056554	(12136975)	C	AluSx1	SINE/Alu	(10)	302	2	2244652
2027	15.4	0.0	1.3	chr2	230056591	230056901	(12136628)	+	AluJr	SINE/Alu	6	312	(0)	2244653
26	21.8	7.8	0.9	chr2	230712975	230713077	(11480452)	+	(CCGCAG)n	Simple_repeat	1	111	(0)	2245575
325	26.5	0.0	2.0	chr2	230837581	230837680	(11355849)	+	MLT1H	LTR/ERVL-MaLR	368	465	(84)	2245767
1635	19.1	9.1	0.5	chr2	231536757	231537157	(10656372)	C	L1MC4	LINE/L1	(828)	7214	6776	2247067
1643	17.8	0.0	0.0	chr2	231537198	231537466	(10656063)	+	AluJb	SINE/Alu	17	285	(27)	2247073
37	20.0	4.1	0.0	chr2	231604662	231604758	(10588771)	+	(CCGGC)n	Simple_repeat	1	101	(0)	2247244
527	21.1	21.3	3.6	chr2	231785902	231786093	(10407436)	+	MIRb	SINE/MIR	26	260	(8)	2247628
263	32.1	9.3	6.6	chr2	231961034	231961334	(10232195)	+	L2c	LINE/L2	3034	3386	(1)	2247971
1840	16.0	3.7	0.0	chr2	232128483	232128744	(10064785)	C	AluJb	SINE/Alu	(30)	282	11	2248227
1940	13.5	4.4	4.1	chr2	233594232	233594594	(8598935)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2250708
362	21.0	2.5	13.1	chr2	237085223	237085359	(5108170)	C	L2	LINE/L2	(544)	2875	2754	2255931
182	31.5	2.7	0.0	chr2	237085499	237085571	(5107958)	C	L2b	LINE/L2	(13)	3362	3288	2255932
12	16.5	0.0	0.0	chr2	238234416	238234442	(3959087)	+	(GGCGG)n	Simple_repeat	1	27	(0)	2257542
813	32.5	13.6	6.3	chr2	238234660	238234826	(3958703)	C	L2	LINE/L2	(627)	2792	2647	2257543
2367	7.2	0.0	0.3	chr2	238234827	238235130	(3958399)	+	AluSc8	SINE/Alu	2	304	(7)	2257544
191	33.0	0.9	3.5	chr2	238970404	238970516	(3223013)	+	L2b	LINE/L2	3042	3151	(224)	2258445
581	8.7	5.9	0.1	chr2	239737374	239738355	(2455174)	+	(CCAGCC)n	Simple_repeat	1	1040	(0)	2259266
288	29.3	9.3	0.5	chr2	240946776	240946991	(1246538)	C	MLT1K	LTR/ERVL-MaLR	(350)	245	9	2260533
20	10.0	6.8	4.8	chr2	241636803	241636861	(556668)	+	(GCGCCCC)n	Simple_repeat	1	63	(0)	2261469
15	16.6	0.0	2.8	chr2	241636897	241636932	(556597)	+	G-rich	Low_complexity	1	36	(0)	2261470
14	22.1	3.6	3.5	chr2	241637029	241637084	(556445)	+	(GCCC)n	Simple_repeat	1	58	(0)	2261471
20	12.1	0.0	0.0	chr2	241637183	241637218	(556311)	+	(CCCGCC)n	Simple_repeat	1	36	(0)	2261472
291	31.4	0.6	3.9	chr2	241747227	241747408	(446121)	C	L1MEd	LINE/L1	(5416)	809	634	2261659
1808	14.3	2.9	4.1	chr2	241747547	241747861	(445668)	C	AluJo	SINE/Alu	(0)	312	2	2261663
14	18.4	2.7	0.0	chr20	325309	325345	(64118822)	+	(CCGCC)n	Simple_repeat	1	38	(0)	2262663
12	21.8	2.7	0.0	chr20	325406	325442	(64118725)	+	(GCCCGA)n	Simple_repeat	1	38	(0)	2262664
14	14.0	4.9	2.3	chr20	325566	325606	(64118561)	+	(GCGGCGGA)n	Simple_repeat	1	43	(0)	2262665
253	30.3	3.5	0.9	chr20	550410	550519	(63893648)	+	MIR	SINE/MIR	150	262	(0)	2263155
14	20.3	2.0	4.0	chr20	675602	675650	(63768517)	+	(GGCGCGG)n	Simple_repeat	1	50	(0)	2263484
13	29.1	0.0	3.5	chr20	675719	675776	(63768391)	+	(CGGCGG)n	Simple_repeat	1	58	(0)	2263485
384	19.2	20.2	0.0	chr20	2624484	2624582	(61819585)	C	LTR16C	LTR/ERVL	(2)	487	364	2267306
245	33.8	3.8	9.5	chr20	2874689	2874940	(61569227)	+	L2	LINE/L2	2800	3036	(383)	2267734
254	29.2	4.4	4.3	chr20	3820017	3820109	(60624058)	+	MER5A	DNA/hAT-Charlie	87	173	(5)	2269562
2561	4.9	0.0	1.6	chr20	4015793	4016099	(60428068)	+	AluY	SINE/Alu	1	302	(9)	2269959
1456	23.4	11.0	1.2	chr20	4366107	4366530	(60077637)	+	MLT1H	LTR/ERVL-MaLR	43	513	(36)	2270629
2012	12.9	0.7	2.3	chr20	4366537	4366845	(60077322)	C	L1MC1	LINE/L1	(9)	6324	6021	2270630
331	21.6	4.3	6.6	chr20	4489479	4489601	(59954566)	C	MLT1H	LTR/ERVL-MaLR	(16)	533	346	2270824
29	0.0	0.0	0.0	chr20	4489602	4489628	(59954539)	+	(TGGGGC)n	Simple_repeat	1	27	(0)	2270825
331	16.8	1.0	11.4	chr20	4489629	4489674	(59954493)	C	MLT1H	LTR/ERVL-MaLR	(204)	345	305	2270824
513	30.4	0.5	9.7	chr20	4489690	4489926	(59954241)	C	MLT1H	LTR/ERVL-MaLR	(334)	215	1	2270824
582	29.5	14.5	1.7	chr20	4563796	4564143	(59880024)	+	LTR78	LTR/ERV1	1	400	(904)	2270937
636	26.2	10.5	9.7	chr20	4564260	4564580	(59879587)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	226	2270938
4638	23.9	5.3	5.0	chr20	4564596	4565862	(59878305)	+	MLT1F-int	LTR/ERVL-MaLR	123	1394	(95)	2270939
336	27.6	9.5	7.3	chr20	5681923	5682086	(58762081)	C	L2c	LINE/L2	(5)	3382	3215	2273034
710	30.6	2.1	4.3	chr20	5682116	5682524	(58761643)	C	MLT1H	LTR/ERVL-MaLR	(5)	590	30	2273035
377	23.5	1.7	9.4	chr20	6069666	6069792	(58374375)	C	MLT1C	LTR/ERVL-MaLR	(0)	569	453	2273808
1526	24.8	10.4	7.3	chr20	6171139	6171669	(58272498)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	2273998
532	26.5	9.2	1.1	chr20	8075070	8075374	(56368793)	C	MLT1H2	LTR/ERVL-MaLR	(0)	569	202	2276734
1779	22.0	8.3	4.0	chr20	8167768	8168273	(56275894)	C	MLT1H	LTR/ERVL-MaLR	(3)	546	17	2276848
1035	27.7	1.6	9.0	chr20	8932109	8932520	(55511647)	+	MLT1H	LTR/ERVL-MaLR	7	387	(162)	2278072
466	26.8	15.2	1.8	chr20	8932657	8932827	(55511340)	C	MIRb	SINE/MIR	(62)	206	9	2278073
457	28.3	0.0	0.0	chr20	8932871	8933004	(55511163)	+	MIRb	SINE/MIR	34	174	(94)	2278074
208	28.9	23.0	0.0	chr20	10022112	10022225	(54421942)	+	L2a	LINE/L2	2526	2673	(746)	2279855
377	20.4	26.7	0.7	chr20	10022342	10022479	(54421688)	C	MLT1H	LTR/ERVL-MaLR	(97)	452	266	2279856
1134	29.7	10.2	0.8	chr20	10022547	10023209	(54420958)	+	L2a	LINE/L2	2675	3416	(10)	2279855
370	26.4	2.8	7.9	chr20	10142528	10142679	(54301488)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	406	2280057
344	23.8	7.8	1.5	chr20	10142760	10142920	(54301247)	C	MLT1H	LTR/ERVL-MaLR	(304)	185	51	2280057
884	25.6	9.9	5.7	chr20	10185725	10186169	(54257998)	C	MLT1H	LTR/ERVL-MaLR	(5)	544	36	2280126
1558	22.6	6.0	6.5	chr20	10702280	10702819	(53741348)	+	MLT1H	LTR/ERVL-MaLR	13	549	(0)	2280911
431	29.1	13.3	4.7	chr20	11025758	11026100	(53418067)	C	MLT1H	LTR/ERVL-MaLR	(172)	377	1	2281423
743	32.5	6.2	3.9	chr20	12221412	12221849	(52222318)	C	MLT1H2	LTR/ERVL-MaLR	(4)	485	37	2283149
16	20.6	0.0	0.0	chr20	12240112	12240150	(52204017)	+	(GGCTG)n	Simple_repeat	1	39	(0)	2283180
269	30.8	18.2	2.4	chr20	12240181	12240450	(52203717)	C	MLT1H2	LTR/ERVL-MaLR	(196)	353	41	2283181
2183	24.2	3.9	0.9	chr20	12575253	12575795	(51868372)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	2283620
1222	30.0	7.7	3.4	chr20	12575796	12576204	(51867963)	C	MLT1H	LTR/ERVL-MaLR	(103)	446	10	2283619
561	28.7	20.0	4.2	chr20	12783945	12784399	(51659768)	+	MLT1H	LTR/ERVL-MaLR	3	547	(2)	2283896
1812	12.5	13.0	1.3	chr20	16425800	16426172	(48017995)	C	MSTA	LTR/ERVL-MaLR	(5)	423	1	2289312
286	11.5	4.5	5.8	chr20	16426174	16426254	(48017913)	+	L1MD3	LINE/L1	7615	7673	(322)	2289313
253	3.1	0.0	0.0	chr20	16426262	16426293	(48017874)	C	MSTA	LTR/ERVL-MaLR	(396)	32	1	2289312
681	28.8	13.6	0.0	chr20	16426318	16426640	(48017527)	+	L1MC4	LINE/L1	7523	7896	(146)	2289314
442	28.1	4.3	8.3	chr20	17331983	17332199	(47111968)	C	MIR	SINE/MIR	(0)	262	55	2290696
294	32.9	8.2	8.1	chr20	17686221	17686742	(46757425)	C	L2	LINE/L2	(662)	2757	2235	2291269
469	21.6	13.7	2.1	chr20	17686775	17686916	(46757251)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	389	2291270
315	32.2	10.5	3.0	chr20	17687157	17687419	(46756748)	C	L2	LINE/L2	(1223)	2196	1912	2291269
974	25.7	14.2	4.0	chr20	17739415	17739885	(46704282)	+	MLT1H	LTR/ERVL-MaLR	23	549	(0)	2291376
493	28.8	5.3	7.0	chr20	17739957	17740152	(46704015)	+	MIRb	SINE/MIR	3	195	(73)	2291377
2537	9.6	0.0	0.0	chr20	17740153	17740464	(46703703)	+	AluSz6	SINE/Alu	1	312	(0)	2291378
710	23.8	1.6	2.2	chr20	19023114	19023298	(45420869)	+	MER5A	DNA/hAT-Charlie	1	184	(5)	2293570
843	27.6	6.1	9.9	chr20	19102659	19103101	(45341066)	C	MLT1H	LTR/ERVL-MaLR	(113)	436	12	2293670
571	26.6	7.8	6.1	chr20	20133260	20133574	(44310593)	C	MLT1H	LTR/ERVL-MaLR	(147)	402	43	2295240
367	23.6	0.0	0.0	chr20	20730394	20730465	(43713702)	+	LTR86B2	LTR/ERVL	117	188	(299)	2295991
345	20.9	11.3	3.5	chr20	20730499	20730612	(43713555)	C	MLT1H	LTR/ERVL-MaLR	(33)	516	393	2295992
941	19.8	0.6	1.2	chr20	20730652	20730813	(43713354)	+	AluJr	SINE/Alu	137	297	(15)	2295993
1756	20.6	2.4	2.9	chr20	21039865	21040240	(43403927)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	2296501
470	27.9	11.2	8.2	chr20	21040241	21040418	(43403749)	+	MLT1H	LTR/ERVL-MaLR	343	533	(16)	2296500
330	27.9	6.3	0.0	chr20	21040454	21040557	(43403610)	+	L2a	LINE/L2	3312	3422	(4)	2296502
229	22.9	1.4	9.1	chr20	21886945	21887021	(42557146)	C	LTR85a	LTR/Gypsy?	(336)	366	296	2297726
13	11.7	3.6	0.0	chr20	21887437	21887464	(42556703)	+	(ATTT)n	Simple_repeat	1	29	(0)	2297727
194	24.5	10.1	7.5	chr20	26168048	26168153	(38276014)	+	L2b	LINE/L2	3248	3356	(19)	2303389
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
696	14.2	0.8	0.8	chr20	29874059	29874179	(34569988)	+	5S	rRNA	1	121	(0)	2304613
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
771	25.3	6.5	1.4	chr20	31260187	31260406	(33183761)	C	MIR	SINE/MIR	(8)	254	23	2305675
1007	21.1	1.3	1.8	chr20	33457470	33457633	(30986534)	C	AluJr	SINE/Alu	(0)	312	148	2310779
2285	8.9	0.7	0.0	chr20	33457634	33457937	(30986230)	C	AluSx1	SINE/Alu	(6)	306	1	2310780
21	26.9	2.1	4.1	chr20	33811326	33811395	(30632772)	+	(GCGGAG)n	Simple_repeat	1	69	(0)	2311672
33	2.8	0.0	0.0	chr20	33811396	33811431	(30632736)	+	(GAGCC)n	Simple_repeat	1	36	(0)	2311673
21	26.9	2.1	4.1	chr20	33811432	33811456	(30632711)	+	(GCGGAG)n	Simple_repeat	4	28	(0)	2311674
367	32.1	9.3	4.4	chr20	34516788	34516992	(29927175)	C	MIR	SINE/MIR	(9)	253	38	2313240
505	26.3	16.2	9.6	chr20	34629322	34629700	(29814467)	+	MLT1H	LTR/ERVL-MaLR	142	549	(0)	2313479
48	2.0	2.0	0.0	chr20	35277769	35277819	(29166348)	+	(GGGCTG)n	Simple_repeat	1	52	(0)	2314926
26	0.0	0.0	0.0	chr20	35277856	35277880	(29166287)	+	(GGCTGG)n	Simple_repeat	1	25	(0)	2314927
22	20.9	4.0	2.6	chr20	35772088	35772164	(28672003)	+	(GGCCG)n	Simple_repeat	1	78	(0)	2316009
12	21.9	2.2	4.3	chr20	35772191	35772236	(28671931)	+	(CCCGG)n	Simple_repeat	1	47	(0)	2316010
14	21.0	3.9	1.9	chr20	35772336	35772386	(28671781)	+	G-rich	Low_complexity	1	53	(0)	2316011
54	8.5	0.0	0.0	chr20	36065052	36065127	(28379040)	+	(GCTG)n	Simple_repeat	1	76	(0)	2316762
17	26.8	1.4	4.1	chr20	36461263	36461334	(27982833)	+	(GGCC)n	Simple_repeat	1	73	(0)	2317683
15	7.8	0.0	3.5	chr20	36461410	36461438	(27982729)	+	(GGGGC)n	Simple_repeat	1	29	(0)	2317684
490	27.0	8.4	5.2	chr20	38309335	38309720	(26134447)	C	MLT1H	LTR/ERVL-MaLR	(2)	558	25	2321880
1727	21.0	15.3	3.7	chr20	38749074	38749803	(25694364)	C	L2a	LINE/L2	(3)	3423	2597	2322790
1136	23.9	17.5	1.9	chr20	39331913	39332338	(25111829)	+	MLT1H	LTR/ERVL-MaLR	1	548	(1)	2323947
2686	5.4	0.3	0.0	chr20	39525840	39526133	(24918034)	+	AluY	SINE/Alu	1	295	(16)	2324280
2446	6.7	0.3	0.0	chr20	43471730	43472029	(20972138)	+	AluY	SINE/Alu	1	301	(10)	2331248
247	21.8	0.0	1.8	chr20	43472031	43472086	(20972081)	+	MLT1D	LTR/ERVL-MaLR	413	467	(0)	2331246
311	21.7	12.1	5.3	chr20	43472091	43472352	(20971815)	+	MLT1H2	LTR/ERVL-MaLR	190	548	(1)	2331249
320	21.7	9.8	0.4	chr20	43472378	43472478	(20971689)	C	MIRb	SINE/MIR	(81)	187	79	2331250
482	25.0	1.9	0.0	chr20	44211530	44211633	(20232534)	C	Charlie4z	DNA/hAT-Charlie	(15)	152	47	2332916
240	26.1	8.7	4.2	chr20	44211706	44211825	(20232342)	+	7SK	RNA	8	133	(198)	2332917
598	29.9	9.7	3.5	chr20	44268408	44268908	(20175259)	C	L2c	LINE/L2	(1)	3386	2833	2333056
576	22.1	1.8	6.3	chr20	44268912	44269085	(20175082)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	384	2333057
377	30.5	1.7	5.6	chr20	44269173	44269297	(20174870)	C	L2c	LINE/L2	(1)	3386	3267	2333058
225	27.3	0.0	0.0	chr20	44651296	44651350	(19792817)	C	MIRc	SINE/MIR	(108)	160	106	2333993
12	14.5	0.0	10.6	chr20	44651517	44651563	(19792604)	+	(GCCCCCG)n	Simple_repeat	1	47	(0)	2333994
16	16.3	0.0	8.8	chr20	45406547	45406603	(19037564)	+	(CCCGCCT)n	Simple_repeat	1	57	(0)	2335583
405	22.2	18.9	3.4	chr20	49187515	49187719	(15256448)	C	MIR	SINE/MIR	(14)	248	5	2343769
16	21.7	0.0	0.0	chr20	49187774	49187805	(15256362)	+	(C)n	Simple_repeat	1	32	(0)	2343770
14	29.6	4.8	2.3	chr20	49188169	49188251	(15255916)	+	GA-rich	Low_complexity	1	87	(0)	2343771
22	23.3	1.7	0.0	chr20	49188384	49188443	(15255724)	+	(GCCCCC)n	Simple_repeat	1	61	(0)	2343772
695	14.6	13.9	11.0	chr20	49198010	49198233	(15245934)	+	L1ME4b	LINE/L1	5258	5482	(2513)	2343795
1933	14.0	2.7	0.3	chr20	49198234	49198526	(15245641)	+	AluSg	SINE/Alu	1	300	(10)	2343805
666	15.7	12.9	19.2	chr20	49198527	49198551	(15245616)	+	L1ME4b	LINE/L1	5483	5483	(2512)	2343795
458	29.2	10.4	5.3	chr20	49484492	49484737	(14959430)	C	L2a	LINE/L2	(1)	3425	3166	2344540
938	14.7	2.6	0.0	chr20	49979640	49979789	(14464378)	+	AluJo	SINE/Alu	1	154	(158)	2345766
263	22.5	11.0	2.2	chr20	49979807	49979897	(14464270)	C	L2a	LINE/L2	(194)	3232	3133	2345767
195	20.0	0.0	0.0	chr20	50732386	50732425	(13711742)	C	MIRc	SINE/MIR	(2)	266	227	2347596
19	8.6	2.4	4.8	chr20	51563396	51563436	(12880731)	+	GA-rich	Low_complexity	1	42	(0)	2349394
718	33.5	1.6	1.2	chr20	52843018	52843268	(11600899)	C	MIRc	SINE/MIR	(5)	263	12	2352293
722	30.5	12.8	3.4	chr20	53157795	53158530	(11285637)	C	L2a	LINE/L2	(0)	3426	2623	2352899
248	31.8	4.5	3.9	chr20	53158763	53158916	(11285251)	+	L2	LINE/L2	2665	2819	(600)	2352900
2194	17.2	10.4	2.7	chr20	54539309	54539576	(9904591)	+	L1MD1	LINE/L1	5957	6242	(0)	2355881
394	25.8	6.8	4.4	chr20	54539720	54539877	(9904290)	+	MLT1H	LTR/ERVL-MaLR	386	547	(2)	2355883
200	31.6	1.5	1.0	chr20	54539985	54540088	(9904079)	C	L2c	LINE/L2	(403)	2984	2878	2355884
21713	10.4	3.4	1.6	chr20	55062653	55067739	(9376428)	C	L1PA10	LINE/L1	(1131)	5200	4	2356783
735	21.6	14.7	0.6	chr20	58168110	58168463	(6275704)	+	LTR52	LTR/ERVL	1	406	(15)	2362506
571	26.8	7.0	1.8	chr20	59228151	59228367	(5215800)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	321	2364120
17	18.9	2.8	0.0	chr20	59228623	59228658	(5215509)	+	GA-rich	Low_complexity	1	37	(0)	2364121
1218	26.8	11.0	6.2	chr20	59333217	59333717	(5110450)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	22	2364265
860	16.3	0.8	0.0	chr20	61528488	61528616	(2915551)	+	FLAM_C	SINE/Alu	1	130	(13)	2367477
27	30.4	2.2	3.6	chr20	61528617	61528654	(2915513)	+	GA-rich	Low_complexity	95	133	(0)	2367478
466	34.0	4.4	0.5	chr20	62578642	62578836	(1865331)	C	MIR	SINE/MIR	(51)	211	9	2368712
40	0.0	0.0	0.0	chr20	62805393	62805429	(1638738)	+	(CTGGGG)n	Simple_repeat	1	37	(0)	2368972
17	7.2	3.3	0.0	chr20	63008965	63008994	(1435173)	+	(TGGGGC)n	Simple_repeat	1	31	(0)	2369183
11	21.8	0.0	4.9	chr20	63009088	63009128	(1435039)	+	G-rich	Low_complexity	1	41	(0)	2369184
1353	25.0	15.4	0.4	chr20	63047948	63048437	(1395730)	C	MER77	LTR/ERVL	(26)	578	2	2369224
281	25.5	9.8	9.5	chr20	63612686	63612949	(831218)	+	MLT1H2	LTR/ERVL-MaLR	256	520	(29)	2369759
759	19.1	4.4	0.0	chr20	63628567	63628697	(815470)	+	FLAM_C	SINE/Alu	1	137	(6)	2369787
22	22.0	2.3	5.6	chr20	64083732	64083819	(360348)	+	(CGCCC)n	Simple_repeat	1	90	(0)	2370491
28	0.0	0.0	0.0	chr20	64255724	64255749	(188418)	+	(GGC)n	Simple_repeat	1	26	(0)	2370630
17	0.0	0.0	0.0	chr20	64255876	64255896	(188271)	+	(GCC)n	Simple_repeat	1	21	(0)	2370631
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
605	6.4	0.9	3.6	chr20	64286700	64287633	(156534)	+	(AGGGTT)n	Simple_repeat	1	942	(0)	2370666
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
355	21.0	6.9	0.0	chr21	9257924	9258004	(37451979)	+	MER21C	LTR/ERVL	30	116	(822)	2374357
490	25.4	1.5	5.0	chr21	9258040	9258180	(37451803)	+	MER21C	LTR/ERVL	99	234	(634)	2374357
1574	22.3	7.7	4.1	chr21	9258166	9258605	(37451378)	+	MER21C	LTR/ERVL	457	913	(25)	2374357
2761	17.5	4.4	0.8	chr21	9317965	9318489	(37391494)	+	MER52A	LTR/ERV1	1211	1755	(0)	2374416
8987	11.4	0.1	1.4	chr21	9318490	9319139	(37390844)	C	L1MA3	LINE/L1	(297)	6008	5360	2374417
628	28.8	11.0	4.9	chr21	9540472	9541140	(37168843)	C	L2a	LINE/L2	(105)	3321	2597	2374508
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
41	2.5	0.0	0.0	chr21	9820677	9820716	(36889267)	+	(AC)n	Simple_repeat	1	40	(0)	2374901
1751	29.7	4.9	6.1	chr21	9820724	9822018	(36887965)	C	SST1	Satellite/centr	(1)	1562	284	2374902
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
481	19.6	2.0	2.0	chr21	17726046	17726144	(28983839)	+	MER63B	DNA/hAT-Blackjack	312	410	(26)	2382119
18	31.2	1.4	1.4	chr21	25100995	25101063	(21608920)	+	(AT)n	Simple_repeat	1	70	(0)	2392046
1650	11.3	0.0	0.4	chr21	25101132	25101370	(21608613)	+	7SK	RNA	1	238	(93)	2392047
12	19.1	5.9	3.7	chr21	26170687	26170737	(20539246)	+	(CCG)n	Simple_repeat	1	54	(0)	2393604
13	21.5	3.4	8.7	chr21	26170896	26170984	(20538999)	+	(GGCCCAC)n	Simple_repeat	1	92	(0)	2393605
2059	13.6	0.4	0.0	chr21	26780793	26781098	(19928885)	C	AluSx1	SINE/Alu	(0)	312	2	2394499
464	22.8	3.5	9.3	chr21	26781099	26781123	(19928860)	C	MLT1H	LTR/ERVL-MaLR	(119)	430	408	2394498
911	29.1	7.8	4.8	chr21	26781232	26781312	(19928671)	C	MLT1H	LTR/ERVL-MaLR	(201)	348	273	2394498
3111	18.9	1.6	0.2	chr21	26781313	26781863	(19928120)	C	MER68	LTR/ERVL	(0)	563	5	2394500
745	19.6	4.2	0.0	chr21	28174419	28174556	(18535427)	C	AluJr	SINE/Alu	(0)	312	169	2396393
876	26.4	16.2	8.9	chr21	29082253	29082756	(17627227)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	2	2397712
1650	16.4	6.5	0.7	chr21	29138700	29138974	(17571009)	+	AluJr	SINE/Alu	1	292	(20)	2397828
2120	12.1	5.0	3.4	chr21	32097451	32097808	(14612175)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2402648
1979	17.4	4.1	0.0	chr21	32128528	32128877	(14581106)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	2402711
324	21.6	2.6	0.0	chr21	32129017	32129090	(14580893)	+	MLT1H	LTR/ERVL-MaLR	7	82	(467)	2402712
723	21.5	11.3	1.1	chr21	32129114	32129296	(14580687)	+	MLT1H	LTR/ERVL-MaLR	346	549	(0)	2402712
15	5.6	0.0	0.0	chr21	32129431	32129449	(14580534)	+	(A)n	Simple_repeat	1	19	(0)	2402713
316	25.7	9.5	6.8	chr21	33143797	33144099	(13565884)	C	MLT1H	LTR/ERVL-MaLR	(4)	545	120	2404379
350	25.7	11.8	0.0	chr21	33144233	33144337	(13565646)	C	MER5B	DNA/hAT-Charlie	(0)	178	60	2404380
33	22.6	1.6	6.2	chr21	33642406	33642532	(13067451)	+	G-rich	Low_complexity	1	129	(0)	2405359
13	25.8	1.9	3.6	chr21	33642732	33642785	(13067198)	+	(GGC)n	Simple_repeat	1	55	(0)	2405360
13	27.3	0.0	3.6	chr21	33642812	33642867	(13067116)	+	(CGCCCCG)n	Simple_repeat	1	56	(0)	2405361
17	12.7	0.0	0.0	chr21	34888500	34888525	(11821458)	+	(A)n	Simple_repeat	1	26	(0)	2407308
14	20.9	3.2	6.2	chr21	34888816	34888877	(11821106)	+	(CGC)n	Simple_repeat	1	64	(0)	2407309
472	25.0	4.3	2.4	chr21	36860174	36860346	(9849637)	C	MIR	SINE/MIR	(88)	174	4	2410569
16	18.1	5.8	1.8	chr21	36860513	36860564	(9849419)	+	(AATTTT)n	Simple_repeat	1	55	(0)	2410570
15	24.4	2.1	0.0	chr21	36989779	36989826	(9720157)	+	G-rich	Low_complexity	1	49	(0)	2410805
1478	22.3	12.1	8.2	chr21	36990585	36991247	(9718736)	C	MER21C	LTR/ERVL	(130)	808	18	2410806
1141	26.1	10.4	1.4	chr21	38508694	38509209	(8200774)	+	MLT1G3	LTR/ERVL-MaLR	3	564	(15)	2413112
238	29.8	4.5	1.2	chr21	38509296	38509380	(8200603)	C	L2a	LINE/L2	(0)	3426	3339	2413113
2932	20.6	1.8	4.3	chr21	40652636	40653255	(6056728)	+	MER77	LTR/ERVL	1	604	(0)	2416344
18	14.3	6.0	8.0	chr21	42653474	42653556	(4056427)	+	G-rich	Low_complexity	1	88	(0)	2419137
23	13.6	3.2	4.7	chr21	42653567	42653628	(4056355)	+	(GCCGGA)n	Simple_repeat	1	64	(0)	2419138
13	21.2	5.9	1.9	chr21	42653637	42653687	(4056296)	+	(GCG)n	Simple_repeat	1	54	(0)	2419139
19	12.8	2.1	4.2	chr21	42653711	42653757	(4056226)	+	(CCGCCCC)n	Simple_repeat	1	48	(0)	2419140
1999	13.6	12.4	1.1	chr21	44715921	44716299	(1993684)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2422063
9171	31.4	2.8	1.1	chr22	11318917	11320518	(39497950)	C	PRIMA41-int	LTR/ERV1	(1593)	6163	4519	2425036
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
630	20.8	0.0	0.0	chr22	11816738	11816993	(39001475)	C	ACRO1	Satellite/acro	(38)	256	1	2425390
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
328	23.6	23.7	0.0	chr22	12627752	12627857	(38190611)	+	MER20	DNA/hAT-Charlie	6	144	(75)	2426051
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
3245	10.9	5.1	2.6	chr22	16562712	16568485	(34249983)	+	(CAAGCCAGC)n	Simple_repeat	4	6010	(0)	2427524
961	25.8	3.4	1.2	chr22	17988756	17989014	(32829454)	+	MER58B	DNA/hAT-Charlie	76	340	(1)	2430000
346	32.7	12.3	2.3	chr22	17989192	17989454	(32829014)	+	L2c	LINE/L2	3034	3326	(61)	2429998
4341	4.4	0.2	0.0	chr22	18890645	18891207	(31927261)	C	HSATI	Satellite	(10)	567	4	2431162
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
14	27.2	1.5	4.4	chr22	19987244	19987310	(30831158)	+	G-rich	Low_complexity	1	68	(0)	2432769
188	20.0	2.4	0.0	chr22	20507237	20507276	(30311192)	+	L2b	LINE/L2	3330	3370	(5)	2433456
431	30.9	2.6	4.5	chr22	21651175	21651330	(29167138)	C	MIRb	SINE/MIR	(3)	265	113	2435615
20	8.8	0.0	5.0	chr22	21736077	21736116	(29082352)	+	(GGGGC)n	Simple_repeat	1	40	(0)	2435787
33	28.0	2.7	3.3	chr22	21867413	21867558	(28950910)	+	(CCG)n	Simple_repeat	1	150	(0)	2436079
12	9.8	0.0	0.0	chr22	21867625	21867646	(28950822)	+	(TGCC)n	Simple_repeat	1	22	(0)	2436080
19	24.2	1.7	1.6	chr22	21867648	21867707	(28950761)	+	G-rich	Low_complexity	1	61	(0)	2436081
12	21.2	2.5	2.4	chr22	21867954	21867993	(28950475)	+	(GCGA)n	Simple_repeat	1	41	(0)	2436082
2724	27.9	14.0	8.3	chr22	23880289	23881078	(26937390)	C	MLT1H-int	LTR/ERVL-MaLR	(587)	822	2	2439136
893	25.9	13.1	5.2	chr22	23881083	23881559	(26936909)	C	MLT1H	LTR/ERVL-MaLR	(3)	546	27	2439136
301	29.7	6.6	2.3	chr22	24270379	24270502	(26547966)	+	L2a	LINE/L2	3268	3398	(28)	2439765
15	17.0	0.0	0.0	chr22	24270700	24270732	(26547736)	+	G-rich	Low_complexity	1	33	(0)	2439766
12	17.3	5.1	6.5	chr22	24271045	24271103	(26547365)	+	(CGCCCG)n	Simple_repeat	1	62	(0)	2439767
12	21.9	3.5	5.0	chr22	24271090	24271147	(26547321)	+	(CCTGCG)n	Simple_repeat	1	60	(0)	2439768
928	24.7	11.9	6.7	chr22	25540755	25541188	(25277280)	C	MLT1H	LTR/ERVL-MaLR	(8)	541	82	2442446
13	14.4	3.2	0.0	chr22	26429187	26429217	(24389251)	+	(CCCCG)n	Simple_repeat	1	32	(0)	2444331
25	23.9	1.4	0.0	chr22	26429294	26429362	(24389106)	+	(CGGCTC)n	Simple_repeat	1	70	(0)	2444332
20	7.0	0.0	0.0	chr22	26429600	26429629	(24388839)	+	(CCG)n	Simple_repeat	1	30	(0)	2444333
512	27.0	20.0	4.9	chr22	27336989	27337358	(23481110)	C	MLT1H	LTR/ERVL-MaLR	(97)	452	13	2446491
1853	24.0	7.4	1.2	chr22	27370122	27370362	(23448106)	C	L1ME3A	LINE/L1	(62)	6111	5867	2446534
2170	13.2	11.4	1.3	chr22	27370363	27370746	(23447722)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2446535
471	25.9	15.7	1.9	chr22	27516108	27516544	(23301924)	+	MLT1H	LTR/ERVL-MaLR	16	526	(23)	2446866
931	27.6	13.3	0.6	chr22	27676242	27676601	(23141867)	C	L1ME3	LINE/L1	(0)	6162	5750	2447272
1695	24.0	7.5	0.1	chr22	27676605	27677073	(23141395)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	3	2447273
790	22.7	15.3	5.4	chr22	27719592	27719907	(23098561)	C	MLT1H	LTR/ERVL-MaLR	(194)	355	3	2447367
1547	18.8	3.8	0.7	chr22	28792575	28792856	(22025612)	C	AluSx3	SINE/Alu	(20)	291	1	2449218
2230	11.0	0.3	0.7	chr22	28792989	28793289	(22025179)	C	AluSq2	SINE/Alu	(13)	300	1	2449219
210	33.0	15.6	0.0	chr22	28799753	28799855	(22018613)	C	MIRb	SINE/MIR	(21)	247	126	2449227
691	33.8	3.9	6.0	chr22	29242852	29243317	(21575151)	C	L1M4a1	LINE/L1	(5539)	597	142	2450192
195	32.6	5.9	0.0	chr22	30202731	30202825	(20615643)	C	L3	LINE/CR1	(2300)	1799	1699	2452128
2187	10.9	0.0	0.0	chr22	30203128	30203412	(20615056)	+	AluSz6	SINE/Alu	16	300	(12)	2452129
379	24.3	1.0	3.7	chr22	30605958	30606064	(20212404)	C	MIR3	SINE/MIR	(24)	184	81	2452996
12	17.6	0.0	5.6	chr22	30635629	30635664	(20182804)	+	G-rich	Low_complexity	1	36	(0)	2453063
19	16.8	0.0	0.0	chr22	30635690	30635695	(20182773)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	2453064
15	17.6	0.0	0.0	chr22	30635696	30635727	(20182741)	+	(GGC)n	Simple_repeat	1	32	(0)	2453065
12	15.3	3.5	0.0	chr22	30635736	30635764	(20182704)	+	(GCGCC)n	Simple_repeat	1	30	(0)	2453066
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
504	30.4	4.1	3.3	chr22	33892159	33892495	(16925973)	C	MLT1H	LTR/ERVL-MaLR	(13)	476	82	2460003
1316	29.3	8.6	4.5	chr22	34041225	34041713	(16776755)	+	MLT1H	LTR/ERVL-MaLR	11	521	(28)	2460295
197	30.3	1.5	2.9	chr22	34083668	34083735	(16734733)	+	L2c	LINE/L2	3131	3197	(178)	2460383
66	1.7	0.0	0.0	chr22	35380834	35380894	(15437574)	+	(TG)n	Simple_repeat	1	61	(0)	2462844
186	28.3	0.0	0.0	chr22	35381304	35381356	(15437112)	+	MIRb	SINE/MIR	26	78	(190)	2462845
2142	6.5	7.8	2.1	chr22	36459125	36459415	(14359053)	C	AluY	SINE/Alu	(1)	310	2	2465103
437	36.6	0.8	5.7	chr22	36855994	36856239	(13962229)	+	MIRb	SINE/MIR	29	262	(6)	2466011
280	34.9	0.9	0.9	chr22	36856164	36856270	(13962198)	C	MIRb	SINE/MIR	(0)	268	162	2466012
263	27.8	5.7	4.7	chr22	37033229	37033403	(13785065)	+	MIRc	SINE/MIR	99	267	(1)	2466360
30	3.1	0.0	0.0	chr22	37805259	37805291	(13013177)	+	(GAGGCA)n	Simple_repeat	1	33	(0)	2468119
17	21.0	0.0	5.5	chr22	37843852	37843918	(12974550)	+	(GCCCC)n	Simple_repeat	1	63	(0)	2468201
513	27.5	13.2	1.2	chr22	37904995	37905167	(12913301)	C	MIRb	SINE/MIR	(52)	216	20	2468376
16	20.7	0.0	4.2	chr22	37905344	37905391	(12913077)	+	(GGCT)n	Simple_repeat	1	48	(0)	2468377
370	25.8	8.3	1.7	chr22	37934249	37934397	(12884071)	+	MIRb	SINE/MIR	7	167	(101)	2468447
216	24.4	0.0	0.0	chr22	38036520	38036564	(12781904)	+	L2b	LINE/L2	3329	3373	(2)	2468659
1118	28.3	10.2	1.3	chr22	38036743	38037215	(12781253)	+	L2a	LINE/L2	2906	3425	(1)	2468670
190	31.5	13.3	1.4	chr22	38319406	38319550	(12498918)	C	MIRb	SINE/MIR	(13)	255	91	2469250
15	12.4	5.7	0.0	chr22	38319675	38319709	(12498759)	+	(CCACC)n	Simple_repeat	1	37	(0)	2469251
15	11.7	0.0	0.0	chr22	38505819	38505846	(12312622)	+	(CTCGC)n	Simple_repeat	1	28	(0)	2469636
2002	13.5	0.0	2.1	chr22	39829503	39829790	(10988678)	+	AluSx1	SINE/Alu	1	282	(30)	2472391
15	23.0	1.6	4.8	chr22	40346732	40346792	(10471676)	+	G-rich	Low_complexity	1	62	(0)	2473378
2035	12.7	0.0	4.4	chr22	41110960	41111274	(9707194)	C	AluSz	SINE/Alu	(10)	302	2	2475179
311	31.2	6.5	3.1	chr22	41111275	41111413	(9707055)	C	L1M5	LINE/L1	(1764)	4382	4237	2475178
28	7.9	0.0	0.0	chr22	41915070	41915109	(8903359)	+	(GCTCCG)n	Simple_repeat	1	40	(0)	2477046
487	29.5	5.2	2.7	chr22	42614128	42614315	(8204153)	+	MIRc	SINE/MIR	71	263	(5)	2478497
221	25.0	0.0	1.9	chr22	42614368	42614420	(8204048)	+	MIRc	SINE/MIR	97	148	(120)	2478498
276	27.7	20.4	1.4	chr22	44383166	44383418	(6435050)	+	L2c	LINE/L2	3021	3336	(39)	2481870
321	31.5	10.1	2.2	chr22	44499131	44499357	(6319111)	C	L1ME4a	LINE/L1	(249)	5875	5629	2482062
1722	13.6	1.6	7.5	chr22	44499363	44499544	(6318924)	+	THE1B	LTR/ERVL-MaLR	1	184	(180)	2482063
369	21.0	11.2	9.2	chr22	45067617	45067747	(5750721)	C	HAL1b	LINE/L1	(0)	2421	2288	2483168
544	25.4	3.4	9.5	chr22	45067762	45067983	(5750485)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	342	2483169
448	33.0	1.6	3.2	chr22	45068075	45068142	(5750326)	C	MLT1H	LTR/ERVL-MaLR	(358)	191	128	2483169
2542	12.9	0.0	0.8	chr22	45068143	45068509	(5749959)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2483170
1664	23.6	11.7	1.7	chr22	45112249	45112709	(5705759)	+	MLT1H	LTR/ERVL-MaLR	18	530	(19)	2483274
19	16.0	7.9	3.7	chr22	45502936	45503011	(5315457)	+	(CGCGCCGT)n	Simple_repeat	1	82	(0)	2484075
23	5.8	2.8	0.0	chr22	45978685	45978720	(4839748)	+	(GCGGGC)n	Simple_repeat	1	37	(0)	2484825
17	19.6	1.5	7.3	chr22	46537621	46537687	(4280781)	+	(GGCCC)n	Simple_repeat	1	68	(0)	2485682
13	12.2	2.4	7.1	chr22	49993464	49993504	(824964)	+	G-rich	Low_complexity	1	42	(0)	2490045
17	18.2	2.2	2.1	chr22	50270303	50270348	(548120)	+	(GCCCCGC)n	Simple_repeat	1	47	(0)	2490386
14	23.2	4.7	3.0	chr22	50270349	50270364	(548104)	+	(CAGCCC)n	Simple_repeat	3	67	(0)	2490387
83	25.4	1.4	0.5	chr22	50474560	50474774	(343694)	+	(CCCGGCC)n	Simple_repeat	1	218	(0)	2490715
27	26.5	2.5	4.0	chr22	50600935	50601055	(217413)	+	(CCCCGA)n	Simple_repeat	1	124	(0)	2490940
479	24.9	17.4	9.5	chr3	4570903	4571248	(193724311)	C	MLT1H	LTR/ERVL-MaLR	(148)	401	23	2499244
213	26.0	8.0	6.3	chr3	4978009	4978119	(193317440)	+	L2c	LINE/L2	3273	3385	(2)	2499892
30	17.1	3.0	0.0	chr3	5122066	5122131	(193173428)	+	(AATG)n	Simple_repeat	1	68	(0)	2500268
225	30.1	4.7	6.1	chr3	9564052	9564182	(188731377)	C	MLT1K	LTR/ERVL-MaLR	(125)	470	342	2507462
880	25.4	1.4	4.6	chr3	9564185	9564302	(188731257)	C	L1MEi	LINE/L1	(3347)	2799	2688	2507463
4511	17.6	3.1	0.2	chr3	10477373	10478480	(187817079)	C	L1MB3	LINE/L1	(0)	6183	5043	2509494
404	32.5	9.8	3.3	chr3	10478512	10478796	(187816763)	+	L2b	LINE/L2	2429	2741	(678)	2509495
1961	11.2	8.9	3.3	chr3	10478797	10479155	(187816404)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2509496
411	26.5	10.5	0.0	chr3	10490252	10490387	(187805172)	+	MIR	SINE/MIR	77	228	(34)	2509520
2014	12.3	3.3	1.7	chr3	10490398	10490697	(187804862)	C	AluSz6	SINE/Alu	(6)	306	2	2509521
2122	12.2	1.4	0.3	chr3	11623745	11624039	(186671520)	C	AluJb	SINE/Alu	(12)	300	3	2511753
226	22.9	0.0	2.0	chr3	11624124	11624172	(186671387)	C	MER5A	DNA/hAT-Charlie	(22)	167	120	2511754
180	21.6	0.0	0.0	chr3	11624576	11624612	(186670947)	+	MIR1_Amn	SINE/MIR	113	149	(81)	2511755
13	22.5	0.0	0.0	chr3	12288097	12288132	(186007427)	+	G-rich	Low_complexity	1	36	(0)	2513013
257	21.9	1.4	2.7	chr3	12664617	12664691	(185630868)	+	L1ME3G	LINE/L1	189	262	(662)	2513760
20	21.3	1.4	5.5	chr3	14602971	14603048	(183692511)	+	(CCGGCC)n	Simple_repeat	1	74	(0)	2517288
14	22.0	0.0	0.0	chr3	14603042	14603078	(183692481)	+	(GCAGG)n	Simple_repeat	1	37	(0)	2517289
13	18.3	2.6	2.5	chr3	14603207	14603245	(183692314)	+	G-rich	Low_complexity	1	40	(0)	2517290
320	23.9	11.9	9.7	chr3	14619920	14620254	(183675305)	+	MLT1H	LTR/ERVL-MaLR	108	533	(16)	2517333
270	24.6	10.9	9.0	chr3	14620314	14620447	(183675112)	C	L2a	LINE/L2	(829)	2590	2454	2517332
325	26.7	10.3	4.4	chr3	15172879	15173120	(183122439)	+	MLT1H2	LTR/ERVL-MaLR	57	354	(195)	2518323
1164	22.5	16.6	5.3	chr3	15443323	15443795	(182851764)	C	MLT1H	LTR/ERVL-MaLR	(4)	545	9	2518846
342	22.3	8.1	4.0	chr3	16253006	16253182	(182042377)	+	MLT1H	LTR/ERVL-MaLR	1	178	(311)	2520232
351	24.9	11.4	4.4	chr3	16253250	16253394	(182042165)	+	MLT1H	LTR/ERVL-MaLR	404	549	(0)	2520232
248	35.1	5.5	3.1	chr3	17122523	17122681	(181172878)	+	LTR78	LTR/ERV1	95	257	(1047)	2521432
1474	25.3	5.2	2.3	chr3	17122717	17123207	(181172352)	C	MLT1H	LTR/ERVL-MaLR	(0)	489	14	2521433
34	29.0	0.7	4.6	chr3	18444859	18444970	(179850589)	+	G-rich	Low_complexity	6	151	(0)	2523291
12	21.4	3.3	6.3	chr3	18445150	18445210	(179850349)	+	(CGGCC)n	Simple_repeat	1	63	(0)	2523292
18	10.7	0.0	3.0	chr3	18445289	18445321	(179850238)	+	(GCC)n	Simple_repeat	1	33	(0)	2523293
1945	19.7	3.7	6.4	chr3	20932840	20933339	(177362220)	+	MER63D	DNA/hAT-Blackjack	4	489	(572)	2526785
575	28.2	8.3	7.4	chr3	22731933	22732409	(175563150)	+	MLT1H	LTR/ERVL-MaLR	1	533	(16)	2529125
225	26.4	11.3	0.9	chr3	24303259	24303369	(173992190)	+	MLT1H	LTR/ERVL-MaLR	63	186	(303)	2531668
261	26.8	1.3	18.2	chr3	24303384	24303575	(173991984)	+	MLT1H	LTR/ERVL-MaLR	262	420	(129)	2531668
1933	15.0	12.8	3.6	chr3	25887953	25888339	(172407220)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2533990
345	25.4	11.6	3.0	chr3	28241156	28241289	(170054270)	+	L2a	LINE/L2	3279	3425	(1)	2537505
20	15.5	2.3	0.0	chr3	29281478	29281520	(169014039)	+	(TTTTG)n	Simple_repeat	1	44	(0)	2538966
233	16.2	17.1	6.8	chr3	32423010	32423082	(165872477)	C	MLT1I	LTR/ERVL-MaLR	(49)	362	281	2543862
442	21.6	0.0	7.6	chr3	32423212	32423316	(165872243)	+	Charlie29a	DNA/hAT-Charlie	316	412	(307)	2543863
12	26.8	0.0	0.0	chr3	32502546	32502585	(165792974)	+	(CCCGAG)n	Simple_repeat	1	40	(0)	2543989
17	12.3	0.0	5.1	chr3	32502871	32502910	(165792649)	+	(CCGCC)n	Simple_repeat	1	37	(0)	2543990
618	28.7	10.2	9.8	chr3	34291405	34291864	(164003695)	C	MLT1H	LTR/ERVL-MaLR	(7)	542	81	2547242
1056	29.2	8.7	6.6	chr3	34534068	34534459	(163761100)	C	MLT1H	LTR/ERVL-MaLR	(104)	445	45	2547549
184	7.2	0.0	3.5	chr3	38165413	38165441	(160130118)	+	L2b	LINE/L2	2962	2989	(386)	2552611
18	17.6	3.6	3.5	chr3	38165766	38165820	(160129739)	+	(GGC)n	Simple_repeat	1	57	(0)	2552612
15	13.9	0.0	0.0	chr3	38453941	38453964	(159841595)	+	(C)n	Simple_repeat	1	24	(0)	2553072
1136	30.9	3.3	3.0	chr3	39180055	39180693	(159114866)	C	L2a	LINE/L2	(139)	3287	2639	2554101
484	33.0	9.3	3.4	chr3	39181187	39181516	(159114043)	+	L2a	LINE/L2	3068	3422	(4)	2554103
492	27.1	17.0	5.1	chr3	40874363	40874716	(157420843)	+	MLT1H	LTR/ERVL-MaLR	132	536	(13)	2556714
421	28.2	3.0	6.5	chr3	42753072	42753329	(155542230)	+	MLT1H2	LTR/ERVL-MaLR	63	354	(195)	2559590
1212	26.8	7.2	5.3	chr3	42753425	42753911	(155541648)	C	L2a	LINE/L2	(0)	3426	2930	2559591
425	28.4	6.8	5.2	chr3	43081684	43082114	(155213445)	+	MLT1H2	LTR/ERVL-MaLR	2	533	(16)	2560107
706	28.7	12.5	2.6	chr3	43082160	43082792	(155212767)	+	LTR84b	LTR/ERVL	14	732	(29)	2560108
13	28.4	2.2	6.5	chr3	44477552	44477642	(153817917)	+	(GCC)n	Simple_repeat	1	93	(0)	2562165
2464	7.2	0.7	0.0	chr3	44860987	44861290	(153434269)	C	AluSp	SINE/Alu	(7)	306	1	2562797
17	15.7	2.2	4.3	chr3	45594048	45594093	(152701466)	+	(CGCC)n	Simple_repeat	1	47	(0)	2564111
12	22.4	0.0	2.6	chr3	47803441	47803478	(150492081)	+	G-rich	Low_complexity	1	38	(0)	2568028
20	18.0	3.3	3.2	chr3	48187990	48188049	(150107510)	+	(GCCGCC)n	Simple_repeat	1	62	(0)	2568895
26	21.6	1.6	0.0	chr3	49093912	49093975	(149201584)	+	(CCG)n	Simple_repeat	1	65	(0)	2570661
13	23.4	5.9	0.0	chr3	49411648	49411698	(148883861)	+	G-rich	Low_complexity	1	54	(0)	2571301
13	16.1	7.7	3.6	chr3	49411696	49411747	(148883812)	+	(GGC)n	Simple_repeat	1	56	(0)	2571302
16	26.7	0.0	3.5	chr3	49470325	49470381	(148825178)	+	(GGC)n	Simple_repeat	1	57	(0)	2571453
183	25.5	3.8	0.0	chr3	50569634	50569684	(147725875)	C	MIR1_Amn	SINE/MIR	(64)	166	114	2573214
2771	9.1	0.0	2.3	chr3	50689252	50689635	(147605924)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2573410
1457	12.8	5.8	3.4	chr3	50689636	50689848	(147605711)	C	MER1A	DNA/hAT-Charlie	(265)	264	46	2573411
1003	17.7	4.3	0.0	chr3	50689874	50690093	(147605466)	C	L1M4	LINE/L1	(895)	5251	5022	2573405
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
14	17.3	5.1	0.0	chr3	51538872	51538910	(146756649)	+	(CGGCG)n	Simple_repeat	1	41	(0)	2574564
195	26.8	6.6	2.7	chr3	52051337	52051409	(146244150)	+	MIR	SINE/MIR	96	171	(91)	2575382
277	18.9	20.8	2.1	chr3	52771182	52771278	(145524281)	C	L2c	LINE/L2	(1)	3386	3267	2576441
816	28.1	10.4	1.9	chr3	54113998	54114595	(144180964)	C	L2a	LINE/L2	(119)	3307	2653	2578588
1124	23.0	13.5	6.0	chr3	55425279	55425564	(142869995)	C	MLT1H	LTR/ERVL-MaLR	(46)	503	179	2580415
2446	13.2	2.2	0.6	chr3	55425565	55425922	(142869637)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2580416
2008	21.8	5.5	11.6	chr3	55578610	55579196	(142716363)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	2580686
2210	8.4	2.0	1.7	chr3	57693367	57693664	(140601895)	+	AluSx3	SINE/Alu	1	299	(12)	2584451
1117	26.9	2.5	6.8	chr3	58644196	58644246	(139651313)	+	MLT1K	LTR/ERVL-MaLR	163	213	(382)	2586421
2403	9.7	6.3	2.3	chr3	58644247	58644594	(139650965)	+	THE1B	LTR/ERVL-MaLR	1	363	(1)	2586422
588	31.2	3.5	4.9	chr3	60506510	60506795	(137788764)	+	MLT1I	LTR/ERVL-MaLR	21	302	(109)	2589108
261	28.5	8.2	8.9	chr3	60506775	60506909	(137788650)	+	MLT1I	LTR/ERVL-MaLR	416	549	(0)	2589108
596	34.9	4.7	3.7	chr3	60506931	60507469	(137788090)	C	L2c	LINE/L2	(5)	3382	2841	2589109
2404	13.6	3.1	1.3	chr3	61404851	61405224	(136890335)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2590498
1520	25.9	6.1	1.1	chr3	63458239	63458702	(134836857)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	61	2594073
284	28.6	9.0	0.4	chr3	63479744	63479872	(134815687)	C	MIR	SINE/MIR	(101)	167	17	2594107
1914	15.0	0.7	0.7	chr3	63882383	63882675	(134412884)	C	AluSx	SINE/Alu	(9)	303	11	2594842
654	28.1	10.3	9.1	chr3	65050608	65051026	(133244533)	+	MLT1H	LTR/ERVL-MaLR	123	547	(2)	2596822
1273	27.9	10.4	2.5	chr3	67361654	67362138	(130933421)	+	MLT1H	LTR/ERVL-MaLR	6	533	(16)	2600717
327	34.5	4.0	11.8	chr3	67362147	67362690	(130932869)	+	L2b	LINE/L2	2927	3388	(38)	2600718
2291	15.1	0.0	0.3	chr3	70079416	70079780	(128215779)	+	MER47A	DNA/TcMar-Tigger	3	366	(0)	2605291
619	25.7	26.3	4.5	chr3	70079821	70080121	(128215438)	+	LTR16A1	LTR/ERVL	15	387	(69)	2605292
444	26.4	8.6	8.6	chr3	70080122	70080295	(128215264)	C	MER96	DNA/hAT-Tip100	(0)	175	2	2605293
426	29.8	9.0	8.5	chr3	71830479	71830841	(126464718)	+	MLT1H	LTR/ERVL-MaLR	23	387	(162)	2607905
349	29.6	1.0	4.8	chr3	71830940	71831042	(126464517)	C	L2c	LINE/L2	(4)	3383	3285	2607906
543	26.7	5.2	5.9	chr3	72321150	72321420	(125974139)	C	MLT1H	LTR/ERVL-MaLR	(186)	363	95	2608941
2064	14.8	0.0	0.0	chr3	72580164	72580461	(125715098)	C	AluJb	SINE/Alu	(14)	298	1	2609493
755	25.5	11.0	16.6	chr3	72580462	72580829	(125714730)	+	MLT1H	LTR/ERVL-MaLR	139	547	(2)	2609492
16	4.5	0.0	0.0	chr3	72580832	72580854	(125714705)	+	(CATT)n	Simple_repeat	1	23	(0)	2609494
242	22.8	5.0	0.0	chr3	72580857	72580913	(125714646)	C	L2a	LINE/L2	(0)	3426	3367	2609495
279	25.3	5.0	12.8	chr3	72580931	72581039	(125714520)	+	L2c	LINE/L2	3283	3382	(5)	2609487
515	30.1	5.3	2.3	chr3	72848661	72848881	(125446678)	+	MIR	SINE/MIR	18	245	(17)	2610047
819	26.8	6.3	6.0	chr3	75109164	75109528	(123186031)	+	L1MDa	LINE/L1	56	421	(6212)	2613722
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
18	27.6	1.2	4.7	chr3	77039727	77039811	(121255748)	+	(CCCCT)n	Simple_repeat	1	86	(0)	2616366
34	7.0	0.0	0.0	chr3	77040050	77040094	(121255465)	+	(CCCT)n	Simple_repeat	1	45	(0)	2616367
274	25.9	12.6	6.7	chr3	84750059	84750207	(113545352)	C	MLT1H	LTR/ERVL-MaLR	(19)	530	372	2626141
1092	30.3	5.4	4.6	chr3	87193124	87193597	(111101962)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	72	2629233
14	14.2	0.0	5.7	chr3	88058632	88058666	(110236893)	+	(GGC)n	Simple_repeat	1	35	(0)	2630310
10450	13.5	1.1	0.6	chr3	88794792	88796414	(109499145)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	2631249
9928	14.5	1.6	2.0	chr3	96500001	96501660	(101793899)	+	Tigger4	DNA/TcMar-Tigger	17	1669	(1062)	2636757
1583	17.9	6.4	3.0	chr3	96510316	96510677	(101784882)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2636768
13	16.9	3.0	0.0	chr3	98901541	98901573	(99393986)	+	GA-rich	Low_complexity	1	34	(0)	2639606
17	18.6	0.0	7.0	chr3	98902062	98902118	(99393441)	+	(CCTCGCT)n	Simple_repeat	1	57	(0)	2639607
232	29.6	9.3	3.0	chr3	99439028	99439128	(98856431)	C	MIR3	SINE/MIR	(22)	186	79	2640253
249	18.9	8.6	1.9	chr3	99439236	99439289	(98856270)	C	SVA_F	Retroposon/SVA	(930)	445	388	2640254
536	20.0	5.6	2.5	chr3	99439242	99439361	(98856198)	+	FLAM_C	SINE/Alu	9	132	(11)	2640255
16	17.9	4.5	0.0	chr3	99439364	99439411	(98856148)	+	A-rich	Low_complexity	1	50	(0)	2640256
34	22.2	1.6	5.7	chr3	100709847	100709968	(97585591)	+	GA-rich	Low_complexity	1	124	(0)	2642107
678	28.6	7.4	0.4	chr3	102972224	102972448	(95323111)	+	MLT1H	LTR/ERVL-MaLR	1	242	(307)	2645230
232	26.6	19.3	0.0	chr3	102972516	102972628	(95322931)	+	MLT1H	LTR/ERVL-MaLR	404	543	(6)	2645230
231	32.4	0.0	1.3	chr3	102972658	102972732	(95322827)	C	L2	LINE/L2	(1536)	1883	1810	2645226
58	9.7	8.1	0.0	chr3	102972733	102972843	(95322716)	+	(TA)n	Simple_repeat	1	120	(0)	2645231
2005	13.3	9.1	1.8	chr3	106404370	106404706	(91890853)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2649478
15	24.9	1.9	1.8	chr3	112086265	112086318	(86209241)	+	(CCGCT)n	Simple_repeat	1	55	(0)	2657367
624	26.4	10.8	8.4	chr3	112621054	112621566	(85673993)	+	MLT1H	LTR/ERVL-MaLR	1	527	(22)	2658093
506	22.1	0.6	12.2	chr3	112621599	112621652	(85673907)	C	MIR3	SINE/MIR	(40)	168	125	2658094
446	25.0	6.8	4.7	chr3	114045002	114045173	(84250386)	+	MER103C	DNA/hAT-Charlie	10	185	(112)	2660160
211	32.1	2.2	3.6	chr3	114045218	114045356	(84250203)	+	L2a	LINE/L2	2643	2779	(640)	2660161
1249	11.7	0.0	0.0	chr3	114045376	114045538	(84250021)	C	AluSx1	SINE/Alu	(16)	296	134	2660162
567	31.5	3.1	5.2	chr3	114153064	114153331	(84142228)	+	MIRb	SINE/MIR	7	268	(0)	2660369
868	13.1	5.8	0.0	chr3	114300258	114300387	(83995172)	+	AluJr	SINE/Alu	161	298	(14)	2660581
492	32.1	6.7	2.6	chr3	114300453	114300580	(83994979)	+	MIRc	SINE/MIR	14	151	(117)	2660582
1760	18.0	5.6	3.1	chr3	114300581	114300965	(83994594)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	2660583
293	29.7	4.1	4.1	chr3	119241130	119241252	(79054307)	C	MIRb	SINE/MIR	(47)	221	99	2667269
17	5.4	4.3	8.3	chr3	119322570	119322615	(78972944)	+	(CTCCCAC)n	Simple_repeat	1	48	(0)	2667374
12	14.7	3.3	0.0	chr3	119322765	119322794	(78972765)	+	(GCTCCT)n	Simple_repeat	1	31	(0)	2667375
13	5.2	0.0	0.0	chr3	120349090	120349109	(77946450)	+	(GCA)n	Simple_repeat	1	20	(0)	2669018
12	4.3	8.3	0.0	chr3	123028314	123028337	(75267222)	+	(GGCTG)n	Simple_repeat	1	26	(0)	2673002
395	19.4	0.0	0.0	chr3	123028393	123028459	(75267100)	+	MIRb	SINE/MIR	113	179	(89)	2673003
20	20.0	3.4	1.6	chr3	125375018	125375029	(72920530)	+	(CCGCCC)n	Simple_repeat	1	36	(25)	2676880
19	22.6	0.0	0.0	chr3	125375030	125375070	(72920489)	+	(C)n	Simple_repeat	1	41	(0)	2676881
20	20.0	3.4	1.6	chr3	125375071	125375076	(72920483)	+	(CCGCCC)n	Simple_repeat	37	61	(0)	2676880
35	10.0	0.0	0.0	chr3	125375248	125375302	(72920257)	+	(CTC)n	Simple_repeat	1	55	(0)	2676882
32	7.3	0.0	0.0	chr3	125519939	125519982	(72775577)	+	(GCCCA)n	Simple_repeat	1	44	(0)	2677205
15	22.6	2.9	5.6	chr3	125916098	125916166	(72379393)	+	(GCCCTG)n	Simple_repeat	1	71	(0)	2677883
285	26.8	10.2	6.7	chr3	127074766	127074973	(71220586)	C	MLT1H	LTR/ERVL-MaLR	(17)	532	317	2679464
318	24.9	11.4	10.3	chr3	127075258	127075378	(71220181)	C	MLT1H	LTR/ERVL-MaLR	(100)	449	333	2679465
10452	8.6	9.6	0.1	chr3	127075379	127076805	(71218754)	C	LTR12C	LTR/ERV1	(0)	1579	3	2679466
1332	25.4	15.3	2.3	chr3	127340441	127340916	(70954643)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	2679872
89	19.5	2.2	2.6	chr3	127547665	127547888	(70747671)	+	(CCCCT)n	Simple_repeat	1	229	(0)	2680227
267	16.8	0.5	0.0	chr3	127548260	127548315	(70747244)	+	MIRb	SINE/MIR	113	170	(98)	2680228
598	22.1	16.1	7.2	chr3	127995292	127995417	(70300142)	+	HAL1	LINE/L1	2066	2203	(304)	2681017
460	27.9	10.7	1.0	chr3	127995453	127995530	(70300029)	+	HAL1	LINE/L1	2277	2355	(152)	2681017
31	0.0	0.0	0.0	chr3	127995531	127995559	(70300000)	+	(AAC)n	Simple_repeat	1	29	(0)	2681019
460	27.9	10.7	1.0	chr3	127995560	127995683	(70299876)	+	HAL1	LINE/L1	2356	2500	(7)	2681017
2365	10.3	0.0	2.8	chr3	128614665	128614985	(69680574)	+	AluSx1	SINE/Alu	1	312	(0)	2682049
2199	12.3	6.0	2.3	chr3	129385350	129385699	(68909860)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2683640
242	30.7	10.9	2.6	chr3	129385819	129385935	(68909624)	+	MIR	SINE/MIR	67	194	(68)	2683641
16	14.2	4.7	7.5	chr3	130894016	130894079	(67401480)	+	(GGAGGC)n	Simple_repeat	1	67	(0)	2686147
24	10.6	0.0	8.3	chr3	130894131	130894190	(67401369)	+	(CCCT)n	Simple_repeat	1	60	(0)	2686148
19	18.6	9.2	1.2	chr3	130894191	130894204	(67401355)	+	(TCCTC)n	Simple_repeat	3	83	(0)	2686149
372	28.6	0.9	0.0	chr3	132204828	132204939	(66090620)	C	MER103C	DNA/hAT-Charlie	(83)	214	102	2688083
374	24.6	4.7	0.0	chr3	132205140	132205247	(66090312)	C	MLT1H2	LTR/ERVL-MaLR	(305)	184	76	2688084
462	15.8	10.1	10.1	chr3	133501398	133501490	(64794069)	C	MLT2E	LTR/ERVL	(44)	584	479	2690016
1380	22.0	5.8	1.0	chr3	133501532	133501837	(64793722)	C	LTR33C	LTR/ERVL	(255)	374	52	2690018
2110	12.4	1.0	4.0	chr3	133501838	133502160	(64793399)	+	AluSq2	SINE/Alu	1	313	(0)	2690019
47	4.3	0.0	0.0	chr3	139127134	139127182	(59168377)	+	(TG)n	Simple_repeat	1	49	(0)	2698857
740	23.8	14.2	7.8	chr3	139127195	139127605	(59167954)	C	MLT1H	LTR/ERVL-MaLR	(1)	548	107	2698858
914	21.2	4.2	5.2	chr3	139550811	139551073	(58744486)	+	MLT1H	LTR/ERVL-MaLR	5	298	(251)	2699515
399	25.7	9.1	4.8	chr3	139551110	139551256	(58744303)	+	MLT1H	LTR/ERVL-MaLR	388	541	(8)	2699515
230	26.7	10.4	0.0	chr3	139932514	139932599	(58362960)	C	MIR	SINE/MIR	(11)	251	156	2700079
776	30.4	24.2	2.4	chr3	139932600	139933038	(58362521)	C	MLT1H	LTR/ERVL-MaLR	(13)	536	1	2700080
866	26.0	4.6	1.9	chr3	140015376	140015692	(58279867)	C	L2a	LINE/L2	(667)	2752	2427	2700189
3986	13.8	4.5	2.8	chr3	141312045	141312735	(56982824)	C	LTR62	LTR/ERVL	(5)	704	1	2702098
13	11.6	2.2	8.7	chr3	142225686	142225730	(56069829)	+	(CAGCCGC)n	Simple_repeat	1	46	(0)	2703768
2437	5.8	0.3	0.0	chr3	142225760	142226051	(56069508)	C	AluSg	SINE/Alu	(16)	294	2	2703769
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
429	23.8	0.0	0.0	chr3	142568381	142568464	(55727095)	+	MER33	DNA/hAT-Charlie	1	84	(240)	2704320
2660	20.4	4.1	5.9	chr3	142568465	142569182	(55726377)	+	MER52D	LTR/ERV1	1	1180	(943)	2704321
412	30.5	11.4	1.1	chr3	143714462	143714650	(54580909)	+	L2c	LINE/L2	2688	2898	(521)	2706050
1078	29.4	4.7	5.4	chr3	143714654	143714830	(54580729)	+	LTR33	LTR/ERVL	21	191	(324)	2706051
2217	11.8	4.7	2.5	chr3	143714831	143715186	(54580373)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2706052
1305	24.5	15.1	2.9	chr3	144332768	144333247	(53962312)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	2706924
461	27.8	18.0	7.8	chr3	148588335	148588822	(49706737)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	2712293
21858	9.2	1.6	0.8	chr3	152367043	152371316	(45924243)	C	L1PA7	LINE/L1	(5)	6464	2169	2718100
283	31.2	1.0	0.0	chr3	152883720	152883815	(45411744)	C	MLT1H2	LTR/ERVL-MaLR	(325)	164	68	2718780
14	14.1	0.0	3.0	chr3	155870486	155870520	(42425039)	+	G-rich	Low_complexity	1	33	(0)	2723194
12	23.4	4.6	4.4	chr3	156816720	156816784	(41478775)	+	G-rich	Low_complexity	1	68	(0)	2724605
18	16.6	1.6	7.8	chr3	156817017	156817079	(41478480)	+	(GCG)n	Simple_repeat	1	64	(0)	2724606
213	25.0	5.1	1.8	chr3	157081585	157081641	(41213918)	C	Tigger19a	DNA/TcMar-Tigger	(8)	315	257	2724941
18	7.6	0.0	0.0	chr3	157159984	157160011	(41135548)	+	(CGT)n	Simple_repeat	1	28	(0)	2725060
1391	22.3	14.8	4.7	chr3	157792538	157792988	(40502571)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2725965
7722	25.1	7.5	4.0	chr3	159599726	159602382	(38693177)	C	L1MA4A	LINE/L1	(4090)	3476	727	2728446
2383	11.0	0.0	0.0	chr3	159602429	159602736	(38692823)	+	AluSg	SINE/Alu	1	308	(2)	2728450
648	27.5	8.8	13.5	chr3	161532161	161532605	(36762954)	C	MLT1H	LTR/ERVL-MaLR	(127)	422	1	2731482
672	28.8	0.5	4.5	chr3	168083780	168083979	(30211580)	+	MLT1F2	LTR/ERVL-MaLR	1	192	(368)	2739579
1829	15.0	12.4	0.9	chr3	168084029	168084371	(30211188)	+	MSTA	LTR/ERVL-MaLR	41	428	(0)	2739580
12	24.9	2.0	3.9	chr3	179148365	179148415	(19147144)	+	(TGC)n	Simple_repeat	1	52	(0)	2755688
18	28.2	1.3	2.6	chr3	179148416	179148454	(19147105)	+	(CCGCTG)n	Simple_repeat	5	92	(0)	2755689
12	5.5	0.0	0.0	chr3	179148530	179148548	(19147011)	+	(CGC)n	Simple_repeat	1	19	(0)	2755690
1130	19.0	0.0	0.0	chr3	179261583	179261782	(19033777)	+	Tigger5	DNA/TcMar-Tigger	29	228	(2178)	2755853
16	16.4	2.2	4.3	chr3	181711744	181711788	(16583771)	+	(CCT)n	Simple_repeat	1	46	(0)	2759749
12246	20.0	7.9	1.4	chr3	182773242	182774505	(15521054)	C	L1M2	LINE/L1	(1070)	6489	5191	2761554
42	21.1	4.5	4.3	chr3	184261459	184261613	(14033946)	+	(GGC)n	Simple_repeat	1	162	(0)	2764317
39	23.6	4.3	4.7	chr3	184380083	184380175	(13915384)	+	(CGCC)n	Simple_repeat	1	87	(0)	2764500
31	0.0	0.0	0.0	chr3	184380176	184380204	(13915355)	+	(GCCCCG)n	Simple_repeat	1	29	(0)	2764501
39	23.6	4.3	4.7	chr3	184380205	184380295	(13915264)	+	(CGCC)n	Simple_repeat	4	99	(0)	2764502
13	16.8	0.0	0.0	chr3	184380348	184380374	(13915185)	+	(GCT)n	Simple_repeat	1	27	(0)	2764503
1939	10.9	0.0	0.4	chr3	186827815	186828079	(11467480)	C	AluSx	SINE/Alu	(48)	264	1	2769055
17	26.7	0.0	4.4	chr3	188947990	188948057	(9347502)	+	(CCGCC)n	Simple_repeat	1	68	(0)	2772772
2129	15.5	6.5	0.7	chr3	191323959	191324361	(6971198)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2776374
1796	31.9	16.2	4.6	chr3	191324362	191324373	(6971186)	C	L2a	LINE/L2	(2534)	885	876	2776365
2534	10.4	2.2	0.8	chr3	191324374	191324732	(6970827)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2776375
13	18.9	2.8	0.0	chr3	195259677	195259712	(3035847)	+	G-rich	Low_complexity	1	37	(0)	2782609
1506	22.6	0.0	1.4	chr4	465102	465398	(189749157)	+	AluJb	SINE/Alu	2	294	(18)	2789128
393	28.6	7.9	3.5	chr4	1122449	1122593	(189091962)	C	MIRb	SINE/MIR	(96)	172	21	2789891
222	26.2	7.2	1.5	chr4	1122906	1122971	(189091584)	+	L2c	LINE/L2	3264	3333	(54)	2789892
12	22.6	5.7	1.8	chr4	1513269	1513321	(188701234)	+	(GCGGCCG)n	Simple_repeat	1	56	(0)	2790271
14	17.6	0.0	0.0	chr4	1580124	1580155	(188634400)	+	A-rich	Low_complexity	1	32	(0)	2790316
12	16.8	0.0	0.0	chr4	1763601	1763627	(188450928)	+	G-rich	Low_complexity	1	27	(0)	2790575
13	18.1	5.3	0.0	chr4	1763809	1763846	(188450709)	+	G-rich	Low_complexity	1	40	(0)	2790576
597	25.5	3.9	0.0	chr4	1929539	1929687	(188284868)	C	MER58B	DNA/hAT-Charlie	(66)	275	121	2790852
276	29.4	9.9	0.0	chr4	1929781	1929926	(188284629)	+	MER5B	DNA/hAT-Charlie	3	164	(14)	2790853
462	22.5	4.0	0.8	chr4	1929936	1930056	(188284499)	C	MER5A1	DNA/hAT-Charlie	(9)	157	33	2790854
452	25.1	16.6	10.2	chr4	5401756	5402261	(184812294)	C	MLT1H	LTR/ERVL-MaLR	(0)	654	13	2796512
272	25.7	6.0	9.2	chr4	5953205	5953324	(184261231)	+	MLT1H	LTR/ERVL-MaLR	421	536	(13)	2797481
350	35.5	4.3	3.4	chr4	5998184	5998390	(184216165)	C	L1ME4a	LINE/L1	(643)	5481	5273	2797579
264	30.9	14.8	0.3	chr4	5998641	5998818	(184215737)	+	L2c	LINE/L2	3130	3364	(23)	2797575
192	32.5	20.0	0.0	chr4	5999030	5999149	(184215406)	+	MIRc	SINE/MIR	88	237	(31)	2797580
193	33.5	2.0	2.0	chr4	6201006	6201134	(184013421)	C	MIRc	SINE/MIR	(116)	152	23	2797930
469	27.6	10.0	2.3	chr4	6201240	6201551	(184013004)	C	L2a	LINE/L2	(6)	3420	3014	2797931
337	32.0	6.4	6.2	chr4	6669616	6669966	(183544589)	C	MLT1H	LTR/ERVL-MaLR	(3)	546	107	2798846
1619	7.7	3.7	0.4	chr4	7112164	7112399	(183102156)	C	7SK	RNA	(87)	244	1	2799620
1371	17.4	7.4	0.0	chr4	7112410	7112684	(183101871)	+	MLT1B	LTR/ERVL-MaLR	77	373	(17)	2799619
286	33.0	7.1	2.0	chr4	7650361	7650561	(182563994)	C	MIRb	SINE/MIR	(23)	245	34	2800483
254	21.9	12.7	1.9	chr4	7650606	7650719	(182563836)	C	MIR1_Amn	SINE/MIR	(119)	149	23	2800484
59	1.8	0.0	0.0	chr4	7650720	7650777	(182563778)	+	(GCCCA)n	Simple_repeat	1	58	(0)	2800485
219	23.7	12.1	7.1	chr4	7650778	7650803	(182563752)	C	MIRb	SINE/MIR	(241)	27	1	2800484
415	20.1	16.4	8.1	chr4	7683113	7683323	(182531232)	C	MLT1H	LTR/ERVL-MaLR	(14)	535	304	2800538
412	29.0	9.6	3.2	chr4	7683330	7683610	(182530945)	C	MLT1H	LTR/ERVL-MaLR	(102)	447	147	2800539
221	28.1	2.0	0.3	chr4	7683703	7683774	(182530781)	C	MIR3	SINE/MIR	(176)	92	20	2800540
12	7.0	5.9	5.6	chr4	9152765	9152798	(181061757)	+	(GCCCCT)n	Simple_repeat	1	36	(0)	2802814
310	39.0	2.3	1.9	chr4	9271577	9271832	(180942723)	C	L1M4	LINE/L1	(1192)	4954	4698	2802923
38	12.6	0.0	0.0	chr4	9271890	9271958	(180942597)	+	(CA)n	Simple_repeat	1	69	(0)	2802924
2834	25.8	8.2	2.3	chr4	15093735	15093832	(175120723)	C	L1ME3B	LINE/L1	(2098)	4048	3960	2812063
1782	9.4	0.4	0.8	chr4	15093847	15094093	(175120462)	C	7SK	RNA	(84)	247	2	2812066
536	27.5	3.0	0.9	chr4	15094098	15094321	(175120234)	C	L1ME3B	LINE/L1	(2191)	3955	3727	2812063
13	16.8	2.8	2.8	chr4	15681302	15681347	(174533208)	+	G-rich	Low_complexity	1	46	(0)	2813056
577	27.4	10.4	3.1	chr4	16388979	16389305	(173825250)	+	MLT1H	LTR/ERVL-MaLR	183	536	(13)	2814242
785	26.6	7.0	9.6	chr4	17070153	17070609	(173143946)	+	MLT1H	LTR/ERVL-MaLR	3	446	(103)	2815491
1210	29.1	7.9	0.7	chr4	17192781	17193240	(173021315)	+	MLT1H	LTR/ERVL-MaLR	39	534	(15)	2815716
315	22.8	7.3	8.2	chr4	20227887	20227996	(169986559)	C	MLT1H	LTR/ERVL-MaLR	(27)	542	431	2820650
2206	13.2	2.5	2.5	chr4	20438235	20438598	(169775957)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2820968
1382	28.6	7.9	1.9	chr4	20438599	20439114	(169775441)	+	L2a	LINE/L2	2860	3422	(4)	2820965
2406	16.9	1.6	2.7	chr4	28005799	28006191	(162208364)	C	Tigger2a	DNA/TcMar-Tigger	(1)	433	35	2833399
2276	10.9	0.0	0.7	chr4	28006192	28006495	(162208060)	+	AluY	SINE/Alu	1	302	(9)	2833400
2406	16.9	1.6	2.7	chr4	28006496	28006539	(162208016)	C	Tigger2a	DNA/TcMar-Tigger	(400)	34	1	2833399
455	29.6	2.1	2.1	chr4	28626425	28626569	(161587986)	+	MLT1H2	LTR/ERVL-MaLR	1	145	(344)	2834279
436	29.8	9.5	2.5	chr4	28626680	28626875	(161587680)	+	MLT1H2	LTR/ERVL-MaLR	337	547	(2)	2834279
232	30.7	1.3	0.0	chr4	37124945	37125019	(153089536)	+	MLT1H	LTR/ERVL-MaLR	4	79	(470)	2845684
377	26.6	4.1	5.4	chr4	37125107	37125253	(153089302)	+	MLT1H	LTR/ERVL-MaLR	210	354	(195)	2845684
15	14.7	0.0	0.0	chr4	37125274	37125303	(153089252)	+	(CAAGC)n	Simple_repeat	1	30	(0)	2845685
575	30.2	2.9	7.5	chr4	38203224	38203581	(152010974)	C	MLT1H	LTR/ERVL-MaLR	(182)	367	27	2847380
1620	26.6	6.5	3.8	chr4	38583017	38583537	(151631018)	+	MLT1H	LTR/ERVL-MaLR	14	549	(0)	2848036
22	21.2	4.6	0.0	chr4	39698238	39698302	(150516253)	+	(GGCGGT)n	Simple_repeat	1	68	(0)	2850244
626	26.2	1.9	13.4	chr4	48250365	48250930	(141963625)	+	MLT1H	LTR/ERVL-MaLR	1	531	(18)	2863556
955	28.6	8.0	3.6	chr4	48250955	48251651	(141962904)	+	L2a	LINE/L2	2693	3418	(8)	2863554
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
7847	20.4	6.1	2.5	chr4	49268140	49270555	(140944000)	+	L1M4	LINE/L1	3095	5610	(570)	2865041
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
2364	19.6	5.0	4.4	chr4	49493900	49494948	(140719607)	+	L1MB8	LINE/L1	4777	5836	(342)	2865154
2241	13.0	7.3	0.5	chr4	49494958	49495361	(140719194)	+	MER61C	LTR/ERV1	11	428	(0)	2865155
406	18.9	2.2	0.5	chr4	49573746	49573848	(140640707)	+	MSTA	LTR/ERVL-MaLR	4	113	(262)	2865274
271	21.9	1.9	0.4	chr4	49573937	49574021	(140640534)	+	THE1D-int	LTR/ERVL-MaLR	959	1064	(587)	2865275
839	22.6	15.8	2.1	chr4	49573984	49574223	(140640332)	C	THE1D-int	LTR/ERVL-MaLR	(398)	1233	955	2865276
867	26.6	5.5	4.6	chr4	49574228	49574534	(140640021)	+	MSTA	LTR/ERVL-MaLR	76	385	(43)	2865274
191	19.2	0.0	10.3	chr4	54656899	54656956	(135557599)	+	MIRc	SINE/MIR	150	201	(67)	2869702
4112	12.9	1.5	2.6	chr4	55150735	55151872	(135062683)	C	L1M1	LINE/L1	(526)	5779	4660	2870433
842	21.1	0.6	1.8	chr4	56086278	56086443	(134128112)	C	AluJb	SINE/Alu	(12)	300	137	2871995
243	28.1	1.0	6.8	chr4	56709265	56709367	(133505188)	+	MIRc	SINE/MIR	37	133	(135)	2873106
1973	9.9	9.0	0.0	chr4	56836983	56837266	(133377289)	+	AluSp	SINE/Alu	1	312	(1)	2873411
1984	11.5	0.0	3.4	chr4	56837281	56837576	(133376979)	+	AluSz	SINE/Alu	1	286	(26)	2873412
1868	24.4	6.5	7.0	chr4	62404774	62404930	(127809625)	+	MLT1E2	LTR/ERVL-MaLR	1	151	(476)	2880757
1686	17.5	7.4	2.6	chr4	62404931	62405276	(127809279)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2880758
1326	25.4	7.9	4.8	chr4	74630084	74630501	(115584054)	+	LTR16B2	LTR/ERVL	14	445	(17)	2896452
283	27.1	19.7	7.2	chr4	74630545	74630844	(115583711)	+	MLT1H	LTR/ERVL-MaLR	195	533	(16)	2896453
2558	11.1	0.8	1.1	chr4	77117288	77117643	(113096912)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2900395
1391	28.9	4.6	2.6	chr4	77117644	77118070	(113096485)	C	LTR33	LTR/ERVL	(36)	479	38	2900394
1614	24.5	10.7	5.0	chr4	80407235	80407733	(109806822)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	19	2904778
1330	29.1	12.9	4.6	chr4	83672320	83672950	(106541605)	C	MER21C	LTR/ERVL	(115)	823	133	2909999
13	18.1	0.0	7.0	chr4	84191456	84191498	(106023057)	+	(TTTTC)n	Simple_repeat	1	43	(0)	2910795
2436	9.8	0.3	0.3	chr4	85100496	85100823	(105113732)	+	7SK	RNA	1	328	(3)	2912116
20	18.6	0.0	0.0	chr4	85127717	85127753	(105086802)	+	(T)n	Simple_repeat	1	37	(0)	2912145
4790	13.2	0.6	0.0	chr4	85128014	85128702	(105085853)	C	HERVK22-int	LTR/ERVK	(6142)	695	3	2912144
2254	10.9	8.1	6.4	chr4	86844701	86845074	(103369481)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2914455
1260	28.3	2.4	2.7	chr4	86845075	86845103	(103369452)	+	MLT1H	LTR/ERVL-MaLR	331	354	(195)	2914454
269	30.1	0.0	0.0	chr4	86845143	86845215	(103369340)	C	L1M5	LINE/L1	(494)	5630	5558	2914456
13	17.6	2.5	2.4	chr4	87006836	87006876	(103207679)	+	(CTGCCGC)n	Simple_repeat	1	41	(0)	2914790
6140	16.9	10.2	4.8	chr4	88244493	88245683	(101968872)	+	LTR2752	LTR/ERV1	1	1263	(0)	2916816
1002	13.9	10.5	0.0	chr4	88245684	88245870	(101968685)	+	AluJb	SINE/Alu	97	305	(7)	2916814
2205	14.7	2.8	1.7	chr4	91994766	91995125	(98219430)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2921786
4844	19.9	4.9	1.1	chr4	91995126	91996564	(98217991)	+	L1MB7	LINE/L1	5180	6681	(1)	2921782
19	22.4	0.0	0.0	chr4	93828990	93829036	(96385519)	+	(CAGCCG)n	Simple_repeat	1	47	(0)	2924143
1865	23.6	7.0	7.5	chr4	94884718	94885267	(95329288)	+	MLT1H	LTR/ERVL-MaLR	1	547	(2)	2925707
2334	11.3	0.3	0.7	chr4	102085163	102085471	(88129084)	C	AluSx1	SINE/Alu	(4)	308	1	2935198
467	30.6	11.7	4.8	chr4	102085552	102085860	(88128695)	C	MLT1H	LTR/ERVL-MaLR	(182)	367	35	2935199
14	20.3	0.0	7.5	chr4	102868954	102869006	(87345549)	+	(GGCC)n	Simple_repeat	1	53	(0)	2936283
1488	17.6	0.4	0.0	chr4	103550305	103550548	(86664007)	C	MER4E1	LTR/ERV1	(0)	781	537	2937188
248	13.5	0.0	0.0	chr4	103550558	103550594	(86663961)	C	MER57B1	LTR/ERV1	(363)	38	2	2937189
365	21.0	20.6	2.4	chr4	103550715	103550880	(86663675)	C	MLT1H2	LTR/ERVL-MaLR	(26)	523	320	2937190
479	25.8	1.6	0.0	chr4	121268564	121268683	(68945872)	C	MLT1H2	LTR/ERVL-MaLR	(305)	184	63	2960850
23	26.4	1.0	5.0	chr4	121697004	121697102	(68517453)	+	(CGGCC)n	Simple_repeat	1	100	(0)	2961412
808	27.7	12.4	6.7	chr4	124191325	124191711	(66022844)	+	MLT1H	LTR/ERVL-MaLR	122	533	(16)	2964983
3601	24.4	4.7	1.7	chr4	124191811	124192844	(66021711)	+	L1M4	LINE/L1	670	1735	(5782)	2964984
12	11.9	0.0	6.5	chr4	128809779	128809809	(61404746)	+	(GCCC)n	Simple_repeat	1	31	(0)	2971405
1977	15.2	7.5	5.0	chr4	133743377	133743793	(56470762)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2977314
8191	13.6	0.8	0.7	chr4	133743794	133743837	(56470718)	C	L1PA15	LINE/L1	(2069)	4077	4034	2977313
1942	16.1	2.3	0.0	chr4	133743875	133744172	(56470383)	+	AluSz	SINE/Alu	1	305	(7)	2977315
432	26.8	9.0	10.4	chr4	137587807	137588143	(52626412)	C	MLT1H2	LTR/ERVL-MaLR	(84)	405	74	2981844
772	30.5	12.1	7.1	chr4	139684471	139685184	(50529371)	C	HAL1	LINE/L1	(1628)	879	126	2985105
1823	10.0	0.0	0.4	chr4	139685188	139685427	(50529128)	C	7SK	RNA	(92)	239	1	2985112
421	26.5	5.6	2.2	chr4	139685434	139685572	(50528983)	C	HAL1	LINE/L1	(2363)	144	1	2985105
13	15.5	11.9	1.5	chr4	140427653	140427711	(49786844)	+	(GCGCGT)n	Simple_repeat	1	66	(0)	2986212
1232	26.1	11.5	3.6	chr4	141885018	141885521	(48329034)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	2988247
215	34.4	3.9	2.4	chr4	141885525	141885649	(48328906)	C	L2c	LINE/L2	(23)	3364	3238	2988248
753	30.7	11.9	7.1	chr4	141885680	141885754	(48328801)	C	L2a	LINE/L2	(1)	3425	3352	2988249
12	20.7	4.3	2.1	chr4	143559112	143559157	(46655398)	+	(AGCTGCC)n	Simple_repeat	1	48	(0)	2990468
774	28.4	1.8	12.0	chr4	143723266	143723448	(46491107)	+	L1ME3B	LINE/L1	5009	5182	(964)	2990662
2026	14.8	1.0	0.6	chr4	143723449	143723759	(46490796)	+	AluJr	SINE/Alu	1	312	(0)	2990663
241	17.3	10.3	0.0	chr4	145538640	145538691	(44675864)	+	Tigger16a	DNA/TcMar-Tigger	849	906	(51)	2993068
12767	19.8	4.8	2.3	chr4	146988371	146992176	(43222379)	C	L1PA13	LINE/L1	(2846)	3920	13	2995037
3739	12.2	0.4	0.6	chr4	147509479	147510008	(42704547)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	2995697
219	23.4	0.0	0.0	chr4	147510011	147510057	(42704498)	+	MIR3	SINE/MIR	155	201	(7)	2995698
2456	12.9	2.1	1.6	chr4	147824475	147824853	(42389702)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2996316
641	23.6	5.3	3.3	chr4	147824854	147825037	(42389518)	C	MIR	SINE/MIR	(35)	227	40	2996317
2429	8.5	1.0	0.7	chr4	147825166	147825458	(42389097)	+	AluSx1	SINE/Alu	1	294	(18)	2996318
1323	26.4	10.3	3.6	chr4	148472825	148473240	(41741315)	+	MLT1H	LTR/ERVL-MaLR	44	490	(59)	2997176
1743	20.6	2.2	3.3	chr4	151803727	151804093	(38410462)	C	MLT1A	LTR/ERVL-MaLR	(11)	363	1	3002003
918	28.5	9.3	6.3	chr4	151810475	151810983	(38403572)	+	MLT1H	LTR/ERVL-MaLR	23	548	(1)	3002015
486	22.6	3.6	1.9	chr4	151811061	151811168	(38403387)	C	MER58C	DNA/hAT-Charlie	(0)	215	106	3002016
37	14.7	1.6	0.0	chr4	153152389	153152451	(37062104)	+	(TA)n	Simple_repeat	1	64	(0)	3004119
2172	13.4	0.7	1.0	chr4	156748871	156749177	(33465378)	+	AluSz6	SINE/Alu	1	306	(6)	3009209
19	19.2	0.0	3.9	chr4	159103843	159103893	(31110662)	+	GA-rich	Low_complexity	1	51	(0)	3012416
19	14.4	9.3	0.0	chr4	159103984	159104037	(31110518)	+	(GCC)n	Simple_repeat	1	59	(0)	3012417
18	22.1	2.4	7.0	chr4	159104055	159104138	(31110417)	+	(GCGG)n	Simple_repeat	1	86	(0)	3012418
7388	18.4	1.8	3.6	chr4	161254729	161256947	(28957608)	C	HUERS-P3-int	LTR/ERV1	(5661)	3258	764	3015096
833	24.4	3.8	4.9	chr4	161256926	161257188	(28957367)	C	HUERS-P3-int	LTR/ERV1	(6760)	658	399	3015096
2552	17.6	12.4	0.2	chr4	161257270	161257841	(28956714)	C	LTR9B	LTR/ERV1	(0)	644	1	3015098
13	32.5	1.6	1.6	chr4	163343867	163343929	(26870626)	+	(CCG)n	Simple_repeat	1	64	(0)	3017917
1895	12.9	4.2	6.7	chr4	164539590	164539980	(25674575)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3019552
11294	11.5	0.8	0.6	chr4	164539982	164541337	(25673218)	C	THE1D-int	LTR/ERVL-MaLR	(2)	1629	277	3019552
13	22.9	1.8	5.3	chr4	165379567	165379622	(24834933)	+	GA-rich	Low_complexity	1	57	(0)	3021000
13	24.2	2.3	0.0	chr4	165379654	165379697	(24834858)	+	(AAGGTGG)n	Simple_repeat	1	45	(0)	3021001
28639	0.6	0.0	0.0	chr4	166569977	166576007	(23638548)	+	L1HS	LINE/L1	124	6155	(0)	3022531
2650	5.5	0.0	0.3	chr4	167151427	167151734	(23062821)	C	AluY	SINE/Alu	(4)	307	1	3023228
776	12.7	43.8	2.2	chr4	167662986	167663154	(22551401)	+	7SK	RNA	1	239	(92)	3023845
329	30.1	6.8	0.5	chr4	167663157	167663350	(22551205)	+	L1MCc	LINE/L1	72	278	(6145)	3023846
13	20.2	2.0	5.8	chr4	168832071	168832121	(21382434)	+	(CCCGCT)n	Simple_repeat	1	52	(0)	3025411
960	28.2	3.7	10.1	chr4	169875042	169875558	(20338997)	+	MLT1H2	LTR/ERVL-MaLR	1	483	(6)	3027000
444	32.8	2.8	1.2	chr4	169875579	169875751	(20338804)	C	L1M5	LINE/L1	(1261)	4885	4710	3026999
12	20.8	0.0	2.9	chr4	173335389	173335423	(16879132)	+	(CTGGC)n	Simple_repeat	1	35	(0)	3031451
19	8.5	0.0	8.9	chr4	182449092	182449136	(7765419)	+	(GCG)n	Simple_repeat	1	45	(0)	3043420
28	10.0	0.0	0.0	chr4	182449187	182449230	(7765325)	+	(GCG)n	Simple_repeat	1	44	(0)	3043420
15	13.3	7.3	0.0	chr4	183504266	183504306	(6710249)	+	(CGCACGC)n	Simple_repeat	1	44	(0)	3045071
14	3.6	6.7	3.1	chr4	183504426	183504455	(6710100)	+	(CGGAG)n	Simple_repeat	1	32	(0)	3045072
12	26.1	0.0	4.1	chr4	186765325	186765373	(3449182)	+	(GGCTGT)n	Simple_repeat	1	49	(0)	3050106
1776	19.7	2.8	1.8	chr4	189768826	189769217	(445338)	+	MLT2D	LTR/ERVL	12	407	(7)	3054239
260	23.3	8.6	13.9	chr4	189769210	189769418	(445137)	C	MLT1H	LTR/ERVL-MaLR	(32)	517	321	3054240
1213	19.6	3.2	1.6	chr4	189769432	189769737	(444818)	+	Charlie1b	DNA/hAT-Charlie	213	523	(0)	3054241
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
4747	18.1	7.3	9.6	chr4	190119764	190122447	(92108)	+	TAR1	Satellite/telo	1	2622	(566)	3054643
543	5.4	1.2	0.9	chr4	190122449	190123118	(91437)	+	(AGGGTT)n	Simple_repeat	1	678	(0)	3054644
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
274	35.1	1.1	0.0	chr5	279276	279369	(181258890)	+	MLT1H2	LTR/ERVL-MaLR	93	187	(302)	3055250
33	19.2	5.1	5.5	chr5	1523884	1524021	(180014238)	+	G-rich	Low_complexity	1	145	(0)	3056316
23	13.5	10.0	6.1	chr5	1524475	1524594	(180013665)	+	(CCTCAGGCC)n	Simple_repeat	1	132	(0)	3056317
109	19.5	0.7	5.0	chr5	2038871	2039165	(179499094)	+	G-rich	Low_complexity	1	297	(0)	3056891
180	20.8	0.0	11.7	chr5	4202745	4202804	(177335455)	+	L3b	LINE/CR1	5056	5108	(124)	3059141
1368	17.5	5.0	0.4	chr5	5126046	5126275	(176411984)	+	7SK	RNA	1	241	(90)	3060194
939	25.3	15.7	2.1	chr5	6204801	6205172	(175333087)	+	MLT1H	LTR/ERVL-MaLR	1	432	(117)	3061511
247	29.0	5.1	6.1	chr5	6205175	6205273	(175332986)	C	MIR	SINE/MIR	(111)	119	22	3061512
10138	11.7	3.6	0.7	chr5	9477307	9478884	(172059375)	+	THE1D-int	LTR/ERVL-MaLR	1	1625	(6)	3065549
1680	15.4	9.0	2.0	chr5	9478890	9479240	(172059019)	+	THE1D	LTR/ERVL-MaLR	1	378	(3)	3065549
19	7.3	0.0	0.0	chr5	14011855	14011883	(167526376)	+	(GCGCG)n	Simple_repeat	1	29	(0)	3071610
254	27.2	8.9	2.1	chr5	14090951	14091044	(167447215)	+	MLT1H	LTR/ERVL-MaLR	432	532	(17)	3071767
2361	10.2	0.0	0.6	chr5	14091057	14091371	(167446888)	+	AluSq2	SINE/Alu	1	313	(0)	3071768
994	17.4	0.0	1.3	chr5	19885581	19885735	(161652524)	C	AluJo	SINE/Alu	(33)	279	127	3079919
1967	14.5	0.3	0.3	chr5	21051025	21051341	(160486918)	C	AluSz	SINE/Alu	(0)	312	1	3081439
366	31.3	3.7	11.5	chr5	21051342	21051467	(160486792)	+	MLT2B1	LTR/ERVL	449	554	(1)	3081438
14	4.9	0.0	0.0	chr5	21051477	21051497	(160486762)	+	(AACA)n	Simple_repeat	1	21	(0)	3081440
2933	1.6	0.0	0.0	chr5	21051523	21051859	(160486400)	+	AluY	SINE/Alu	1	311	(0)	3081441
1692	16.3	7.4	0.0	chr5	21479959	21480258	(160058001)	+	MER2	DNA/TcMar-Tigger	22	345	(0)	3082060
320	22.9	12.5	4.5	chr5	21480265	21480374	(160057885)	C	L2a	LINE/L2	(97)	3329	3210	3082061
1649	9.8	2.9	0.4	chr5	29948828	29949062	(151589197)	+	7SK	RNA	1	241	(90)	3093046
3031	29.9	7.3	2.6	chr5	30716002	30716433	(150821826)	C	MLT1H-int	LTR/ERVL-MaLR	(931)	478	34	3093967
840	29.5	11.6	1.7	chr5	30716512	30716984	(150821275)	C	MLT1H	LTR/ERVL-MaLR	(23)	526	1	3093967
271	25.0	0.0	4.2	chr5	33399047	33399117	(148139142)	+	MLT1H2	LTR/ERVL-MaLR	78	145	(344)	3098270
265	31.8	9.1	1.7	chr5	33399275	33399447	(148138812)	+	MLT1H2	LTR/ERVL-MaLR	347	533	(16)	3098270
744	20.8	13.5	1.0	chr5	33486646	33486839	(148051420)	+	Zaphod3	DNA/hAT-Tip100	13	234	(2389)	3098429
1307	18.9	8.1	6.8	chr5	33486853	33487283	(148050976)	+	LTR48	LTR/ERV1	1	451	(336)	3098430
1912	13.7	7.5	0.0	chr5	33487284	33487640	(148050619)	+	LTR24C	LTR/ERV1	248	633	(2)	3098431
31	24.3	3.3	5.8	chr5	36241604	36241754	(145296505)	+	(GCC)n	Simple_repeat	1	156	(0)	3102472
13	13.6	2.9	2.9	chr5	36241802	36241835	(145296424)	+	G-rich	Low_complexity	1	35	(0)	3102473
604	27.0	7.8	0.5	chr5	37248712	37248912	(144289347)	+	L1MC5a	LINE/L1	1874	2090	(687)	3104088
12	20.8	4.3	2.1	chr5	37249371	37249416	(144288843)	+	(GGCGCG)n	Simple_repeat	1	48	(0)	3104089
592	23.3	4.2	0.6	chr5	38293790	38293949	(143244310)	C	MamRep137	DNA/TcMar-Tigger	(222)	288	123	3105876
311	30.1	0.0	9.6	chr5	38293998	38294122	(143244137)	C	MLT1H	LTR/ERVL-MaLR	(10)	539	427	3105877
255	20.0	14.8	2.6	chr5	38294255	38294331	(143243928)	C	MLT1H2	LTR/ERVL-MaLR	(304)	185	98	3105878
15	22.6	4.8	0.0	chr5	38556751	38556792	(142981467)	+	(CG)n	Simple_repeat	1	44	(0)	3106292
1931	15.4	6.0	2.7	chr5	38726780	38727147	(142811112)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3106564
475	21.3	8.1	11.7	chr5	38727187	38727293	(142810966)	C	LTR82B	LTR/ERVL	(682)	148	40	3106563
1514	25.1	9.1	4.0	chr5	38793047	38793566	(142744693)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	3106682
616	27.1	10.4	8.2	chr5	38868242	38868364	(142669895)	C	MLT1H	LTR/ERVL-MaLR	(174)	375	277	3106800
2916	8.2	0.3	0.0	chr5	38868365	38868718	(142669541)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3106801
1922	11.9	13.5	3.5	chr5	38930966	38931096	(142607163)	C	MER65A	LTR/ERV1	(277)	168	2	3106863
296	25.1	1.2	3.8	chr5	38931205	38931328	(142606931)	C	MLT1G	LTR/ERVL-MaLR	(4)	587	431	3106865
287	29.1	3.7	0.0	chr5	38931446	38931548	(142606711)	C	MLT1G	LTR/ERVL-MaLR	(303)	186	80	3106865
13	8.7	0.0	14.0	chr5	56909853	56909902	(124628357)	+	G-rich	Low_complexity	1	50	(0)	3125753
5594	11.5	2.3	2.0	chr5	60581633	60582888	(120955371)	C	L1PA15	LINE/L1	(2)	6163	4906	3131035
12	14.8	4.8	9.1	chr5	60844373	60844435	(120693824)	+	(GCCGAGG)n	Simple_repeat	1	66	(0)	3131416
18407	19.2	5.8	1.8	chr5	62049803	62052974	(119485285)	C	L1PA15	LINE/L1	(3461)	3305	11	3133133
13	9.4	8.3	2.6	chr5	64165962	64165997	(117372262)	+	(CGG)n	Simple_repeat	1	39	(0)	3136104
14	14.0	3.1	0.0	chr5	65481654	65481685	(116056574)	+	A-rich	Low_complexity	1	33	(0)	3137889
274	24.4	24.2	0.0	chr5	69166597	69166715	(112371544)	+	MIRc	SINE/MIR	78	234	(34)	3143406
12	4.1	3.5	6.7	chr5	69167324	69167352	(112370907)	+	(CTGC)n	Simple_repeat	1	30	(0)	3143407
382	28.3	5.5	1.7	chr5	69189834	69190009	(112348250)	+	MIRb	SINE/MIR	45	227	(41)	3143460
241	25.4	0.0	10.6	chr5	72697079	72697201	(108841058)	C	MLT1H	LTR/ERVL-MaLR	(16)	533	424	3149390
2104	15.1	0.3	0.0	chr5	72697534	72697838	(108840421)	+	AluJb	SINE/Alu	1	306	(6)	3149391
12	18.1	0.0	3.0	chr5	74685110	74685142	(106853117)	+	G-rich	Low_complexity	1	33	(0)	3152359
14	17.6	0.0	0.0	chr5	74685356	74685387	(106852872)	+	(GGTGGC)n	Simple_repeat	1	32	(0)	3152360
17	15.8	2.2	4.3	chr5	77492451	77492496	(104045763)	+	(GCG)n	Simple_repeat	1	47	(0)	3156732
31	21.7	0.0	0.0	chr5	79612336	79612399	(101925860)	+	G-rich	Low_complexity	1	64	(0)	3160094
184	35.7	4.1	0.0	chr5	79771198	79771267	(101766992)	C	MIRb	SINE/MIR	(170)	98	26	3160341
376	26.7	10.6	3.6	chr5	79771676	79771815	(101766444)	C	MIRb	SINE/MIR	(71)	197	47	3160342
232	24.2	1.5	0.0	chr5	80031469	80031534	(101506725)	C	MLT1I	LTR/ERVL-MaLR	(26)	385	319	3160739
493	29.4	9.7	5.6	chr5	80031526	80031792	(101506467)	C	MLT1H	LTR/ERVL-MaLR	(146)	403	125	3160740
30	11.2	0.0	6.2	chr5	80256092	80256156	(101282103)	+	(GCCCC)n	Simple_repeat	1	65	(0)	3161177
713	32.6	7.3	3.2	chr5	82688955	82689293	(98848966)	+	MLT1H	LTR/ERVL-MaLR	1	354	(195)	3164965
2117	13.9	3.0	4.1	chr5	83191243	83191424	(98346835)	+	THE1B	LTR/ERVL-MaLR	1	180	(184)	3165628
12	9.1	7.7	4.8	chr5	84384811	84384849	(97153410)	+	G-rich	Low_complexity	1	42	(0)	3167185
15	17.6	6.7	0.0	chr5	84384898	84384942	(97153317)	+	(GCCC)n	Simple_repeat	1	48	(0)	3167186
467	33.7	11.5	2.4	chr5	88567683	88568022	(92970237)	+	L2c	LINE/L2	2910	3284	(103)	3172517
13	13.8	5.5	6.9	chr5	90529555	90529609	(91008650)	+	(TCCGCC)n	Simple_repeat	1	58	(0)	3174918
2066	13.8	4.8	1.4	chr5	90541377	90541736	(90996523)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	3174937
20	23.2	1.1	7.5	chr5	93580597	93580689	(87957570)	+	(TCTCCC)n	Simple_repeat	1	94	(0)	3178826
2445	28.8	6.8	15.6	chr5	95382558	95383279	(86154980)	C	L2a	LINE/L2	(1495)	1924	1179	3181080
230	22.9	1.4	5.4	chr5	95555504	95555577	(85982682)	C	Charlie9	DNA/hAT-Charlie	(7)	2750	2680	3181311
2407	14.6	2.6	1.1	chr5	96621356	96621730	(84916529)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3182841
540	32.4	5.0	10.2	chr5	96621731	96621946	(84916313)	C	MLT1J	LTR/ERVL-MaLR	(97)	415	216	3182840
346	29.3	3.9	11.2	chr5	99098661	99098829	(82439430)	C	LTR78	LTR/ERV1	(9)	1295	1140	3186046
236	33.3	9.9	4.5	chr5	99098920	99099120	(82439139)	C	LTR78	LTR/ERV1	(307)	997	785	3186046
1866	13.3	7.6	0.8	chr5	99099144	99099498	(82438761)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3186047
299	29.4	15.3	4.5	chr5	102923646	102923866	(78614393)	C	MIRb	SINE/MIR	(10)	258	10	3190752
1024	32.1	2.9	2.9	chr5	106151623	106152039	(75386220)	C	LTR16	LTR/ERVL	(6)	432	16	3194742
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
15	16.9	0.0	0.0	chr5	108381811	108381837	(73156422)	+	(CA)n	Simple_repeat	1	27	(0)	3197553
12	9.8	0.0	0.0	chr5	108381945	108381966	(73156293)	+	(GCGA)n	Simple_repeat	1	22	(0)	3197554
1279	12.1	5.3	0.0	chr5	109699354	109699601	(71838658)	+	L1MA8	LINE/L1	6020	6281	(10)	3199340
1628	7.8	1.3	0.4	chr5	109699602	109699834	(71838425)	C	7SK	RNA	(96)	235	1	3199341
329	21.8	2.5	3.7	chr5	112861649	112861729	(68676530)	+	MER113	DNA/hAT-Charlie	38	117	(404)	3203403
1234	23.6	6.9	8.9	chr5	115629493	115629939	(65908320)	C	MLT1H	LTR/ERVL-MaLR	(6)	543	107	3207071
898	25.7	7.3	5.0	chr5	115629944	115630303	(65907956)	C	MLT2F	LTR/ERVL	(0)	663	295	3207072
15	16.9	0.0	0.0	chr5	116574585	116574617	(64963642)	+	G-rich	Low_complexity	1	33	(0)	3208281
18	4.8	0.0	0.0	chr5	116575153	116575174	(64963085)	+	(A)n	Simple_repeat	1	22	(0)	3208282
679	30.6	9.1	5.2	chr5	116742699	116743107	(64795152)	+	MLT1H	LTR/ERVL-MaLR	39	477	(72)	3208541
2295	11.7	0.0	0.3	chr5	116743108	116743415	(64794844)	+	AluSp	SINE/Alu	1	307	(6)	3208542
2325	11.7	0.8	0.8	chr5	116869289	116869643	(64668616)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3208779
1596	20.0	1.1	8.6	chr5	116869644	116869932	(64668327)	+	MLT1A0	LTR/ERVL-MaLR	78	365	(0)	3208778
626	25.4	10.0	4.0	chr5	122575415	122575788	(58962471)	C	MLT1H	LTR/ERVL-MaLR	(3)	546	148	3216085
2295	9.9	0.3	0.3	chr5	126746815	126747116	(54791143)	C	AluSx4	SINE/Alu	(8)	302	1	3221880
1543	19.1	3.7	4.0	chr5	126747117	126747378	(54790881)	C	MSTC	LTR/ERVL-MaLR	(64)	364	60	3221879
2278	10.5	0.3	1.0	chr5	126747379	126747684	(54790575)	C	AluSx	SINE/Alu	(8)	304	1	3221881
17	24.2	1.6	3.2	chr5	132369671	132369732	(49168527)	+	(CCCGC)n	Simple_repeat	1	63	(0)	3229279
2634	20.2	9.7	5.3	chr5	132522756	132523040	(49015219)	+	L1ME1	LINE/L1	5676	5950	(620)	3229485
26	0.0	0.0	0.0	chr5	132523041	132523065	(49015194)	+	(T)n	Simple_repeat	1	25	(0)	3229486
2634	19.6	10.8	6.0	chr5	132523066	132523091	(49015168)	+	L1ME1	LINE/L1	5951	5951	(619)	3229485
1546	14.9	0.0	2.1	chr5	132523092	132523332	(49014927)	C	AluJb	SINE/Alu	(75)	237	2	3229487
2634	19.6	10.8	6.0	chr5	132523333	132523870	(49014389)	+	L1ME1	LINE/L1	5951	6555	(15)	3229485
2546	6.9	1.0	0.7	chr5	134367369	134367673	(47170586)	C	AluSx	SINE/Alu	(6)	306	1	3232415
185	23.1	0.0	1.9	chr5	134649371	134649423	(46888836)	C	L2b	LINE/L2	(0)	3375	3324	3233001
14	14.9	0.0	3.1	chr5	138338358	138338389	(43199870)	+	(CCCT)n	Simple_repeat	1	32	(0)	3238687
2334	8.4	0.7	0.0	chr5	139332709	139332995	(42205264)	+	AluY	SINE/Alu	2	290	(21)	3240560
331	27.5	8.8	0.0	chr5	139332998	139333118	(42205141)	C	MER5A	DNA/hAT-Charlie	(5)	184	53	3240561
858	15.9	4.9	4.9	chr5	139333109	139333293	(42204966)	C	7SK	RNA	(93)	238	54	3240562
729	8.4	11.9	0.0	chr5	139333294	139333412	(42204847)	C	AluSx	SINE/Alu	(177)	135	1	3240563
244	22.9	9.0	0.0	chr5	139333415	139333475	(42204784)	C	MER5A	DNA/hAT-Charlie	(117)	72	6	3240564
1142	19.2	10.2	1.3	chr5	139351693	139351916	(42186343)	C	AluJr	SINE/Alu	(23)	289	44	3240609
290	24.7	4.9	3.0	chr5	139352032	139352131	(42186128)	C	Tigger4a	DNA/TcMar-Tigger	(91)	145	44	3240610
458	18.9	1.9	0.9	chr5	139352112	139352218	(42186041)	+	Tigger4a	DNA/TcMar-Tigger	114	221	(15)	3240611
15	15.5	3.4	8.2	chr5	139648213	139648271	(41889988)	+	GA-rich	Low_complexity	1	61	(0)	3241240
23	24.5	1.2	4.7	chr5	139648335	139648418	(41889841)	+	(GGC)n	Simple_repeat	1	85	(0)	3241241
12	9.1	7.7	4.8	chr5	139648420	139648458	(41889801)	+	(AGAGC)n	Simple_repeat	1	42	(0)	3241242
14	8.2	0.0	3.6	chr5	139648486	139648513	(41889746)	+	(CCCAG)n	Simple_repeat	1	28	(0)	3241243
14	9.6	0.0	0.0	chr5	139648803	139648825	(41889434)	+	(GCG)n	Simple_repeat	1	23	(0)	3241244
13	33.9	1.5	0.0	chr5	139648864	139648892	(41889367)	+	(CCCTCC)n	Simple_repeat	1	66	(0)	3241245
13	12.1	8.3	0.0	chr5	139648893	139648928	(41889331)	+	(CCCCT)n	Simple_repeat	1	39	(0)	3241246
14	11.2	0.0	6.1	chr5	140346522	140346554	(41191705)	+	(GCCC)n	Simple_repeat	1	33	(0)	3242425
13	20.8	0.0	0.0	chr5	140346653	140346685	(41191574)	+	(GCCCC)n	Simple_repeat	1	33	(0)	3242426
247	17.4	6.8	4.2	chr5	141968852	141968923	(39569336)	+	MER5A	DNA/hAT-Charlie	27	100	(89)	3244973
2392	9.5	0.0	0.3	chr5	142232768	142233073	(39305186)	C	AluSq	SINE/Alu	(8)	305	1	3245513
1004	14.6	0.0	3.2	chr5	142233074	142233210	(39305049)	C	AluJb	SINE/Alu	(177)	135	1	3245512
1943	12.0	9.8	0.9	chr5	142233291	142233635	(39304624)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	3245514
2013	15.4	3.3	3.6	chr5	148836873	148837235	(32701024)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	3256526
637	27.5	6.5	3.5	chr5	149610684	149610836	(31927423)	C	MER102a	DNA/hAT-Charlie	(0)	331	173	3258123
1189	25.9	11.2	1.4	chr5	149610837	149611329	(31926930)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	1	3258124
12	24.5	4.5	0.0	chr5	151758558	151758601	(29779658)	+	(GGC)n	Simple_repeat	1	46	(0)	3262583
639	26.8	8.3	5.3	chr5	151779796	151780319	(29757940)	C	L1ME3Cz	LINE/L1	(447)	550	10	3262624
14	17.1	0.0	2.9	chr5	151780324	151780358	(29757901)	+	(ATATT)n	Simple_repeat	1	35	(0)	3262625
2093	11.1	0.4	1.1	chr5	151780531	151780810	(29757449)	C	AluY	SINE/Alu	(32)	279	2	3262626
904	30.1	9.5	0.9	chr5	154039154	154039664	(27498595)	C	L2b	LINE/L2	(5)	3370	2791	3266299
2789	15.8	1.7	5.3	chr5	154595268	154595491	(26942768)	C	L1MB4	LINE/L1	(1059)	5087	4864	3267547
274	12.8	0.0	0.0	chr5	154661484	154661522	(26876737)	C	MSTB	LTR/ERVL-MaLR	(0)	426	388	3267712
2343	9.2	1.9	0.0	chr5	154661524	154661829	(26876430)	+	AluSp	SINE/Alu	2	313	(0)	3267713
280	33.7	4.6	4.0	chr5	155610507	155610679	(25927580)	C	MIRb	SINE/MIR	(90)	178	5	3269508
409	26.0	1.4	0.2	chr5	158382394	158382495	(23155764)	+	MIRb	SINE/MIR	27	129	(133)	3274504
1478	26.0	10.9	4.2	chr5	158382509	158382966	(23155293)	C	MLT1H	LTR/ERVL-MaLR	(13)	536	44	3274505
19	4.0	0.0	0.0	chr5	168579575	168579600	(12958659)	+	(GCC)n	Simple_repeat	1	26	(0)	3290342
249	30.4	10.8	5.9	chr5	170695061	170695315	(10842944)	+	L2b	LINE/L2	2491	2759	(660)	3294127
292	25.9	13.1	2.8	chr5	171198135	171198277	(10339982)	C	MIRb	SINE/MIR	(67)	201	42	3294843
940	20.9	1.6	0.0	chr5	171198522	171198703	(10339556)	C	MER5A	DNA/hAT-Charlie	(0)	189	5	3294844
321	29.3	2.9	1.0	chr5	171824971	171825070	(9713189)	+	MLT1H2	LTR/ERVL-MaLR	62	163	(326)	3296113
14	20.2	0.0	0.0	chr5	171825196	171825229	(9713030)	+	(AGCCC)n	Simple_repeat	1	34	(0)	3296114
3000	21.8	7.9	3.0	chr5	172068351	172068673	(9469586)	+	L1MEf	LINE/L1	1475	1817	(4425)	3296603
1374	11.8	23.8	0.0	chr5	172068674	172068901	(9469358)	+	AluSz6	SINE/Alu	1	299	(13)	3296608
6966	21.3	9.0	8.7	chr5	172068902	172069497	(9468762)	+	L1MEf	LINE/L1	1818	2421	(3725)	3296603
567	27.3	5.3	0.7	chr5	172082557	172082700	(9455559)	+	MIRb	SINE/MIR	3	153	(115)	3296634
30	0.0	0.0	0.0	chr5	172188064	172188091	(9350168)	+	(GGCTCG)n	Simple_repeat	1	28	(0)	3296889
14	12.5	0.0	0.0	chr5	172188109	172188134	(9350125)	+	(GAG)n	Simple_repeat	1	26	(0)	3296890
13	21.0	5.9	1.9	chr5	172283505	172283555	(9254704)	+	G-rich	Low_complexity	1	54	(0)	3297091
12	17.1	3.8	7.3	chr5	172283768	172283820	(9254439)	+	(CGCTC)n	Simple_repeat	1	55	(0)	3297092
14	24.9	1.3	6.6	chr5	172284016	172284090	(9254169)	+	(CCCCGGC)n	Simple_repeat	1	76	(0)	3297093
1452	24.6	7.1	3.9	chr5	172561557	172561992	(8976267)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	99	3297714
1638	20.0	5.7	2.5	chr5	173706477	173706835	(7831424)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	4	3300105
1396	26.2	11.7	5.5	chr5	174829606	174830167	(6708092)	+	MER77B	LTR/ERVL	1	601	(99)	3302325
249	25.2	10.8	8.0	chr5	175476045	175476169	(6062090)	C	MLT1K	LTR/ERVL-MaLR	(292)	303	175	3303485
1566	24.6	6.2	5.1	chr5	175476273	175476798	(6061461)	+	MLT1H	LTR/ERVL-MaLR	18	549	(0)	3303486
1917	14.2	1.0	0.3	chr5	175587400	175587694	(5950565)	C	AluSx1	SINE/Alu	(15)	297	1	3303695
321	20.0	1.4	1.4	chr5	175587695	175587765	(5950494)	C	MLT1K	LTR/ERVL-MaLR	(524)	71	1	3303696
257	37.0	5.0	3.0	chr5	175587776	175588012	(5950247)	+	L2b	LINE/L2	3119	3360	(15)	3303697
32	0.0	0.0	2.9	chr5	176609769	176609803	(4928456)	+	(CCCGC)n	Simple_repeat	1	35	(0)	3305650
243	30.6	1.6	0.0	chr5	177005789	177005850	(4532409)	+	MIR	SINE/MIR	12	74	(188)	3306399
11	15.9	12.2	0.0	chr5	177133528	177133576	(4404683)	+	(CGGCAG)n	Simple_repeat	1	55	(0)	3306741
13	22.5	3.6	3.5	chr5	177133968	177134022	(4404237)	+	G-rich	Low_complexity	1	57	(0)	3306742
16	25.1	1.7	3.3	chr5	177134341	177134400	(4403859)	+	(GCG)n	Simple_repeat	1	61	(0)	3306743
12	19.6	0.0	0.0	chr5	177426628	177426656	(4111603)	+	G-rich	Low_complexity	1	29	(0)	3307400
22	6.4	0.0	0.0	chr5	177426737	177426769	(4111490)	+	(CGAGC)n	Simple_repeat	1	33	(0)	3307401
2269	9.9	1.6	0.7	chr5	178304231	178304533	(3233726)	+	AluSz6	SINE/Alu	5	310	(2)	3308951
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
357	28.6	10.2	6.0	chr5	178646279	178646625	(2891634)	+	MLT1H	LTR/ERVL-MaLR	10	407	(142)	3309549
2516	4.1	0.3	0.7	chr5	178729873	178730164	(2808095)	C	AluY	SINE/Alu	(20)	291	1	3309714
2356	19.5	4.8	3.3	chr5	178858901	178859711	(2678548)	C	L1MA9	LINE/L1	(534)	5778	4872	3309952
17	12.6	4.3	4.1	chr5	178860283	178860329	(2677930)	+	(GCCGCT)n	Simple_repeat	1	49	(0)	3309954
13	25.9	1.9	1.9	chr5	178860395	178860446	(2677813)	+	G-rich	Low_complexity	1	53	(0)	3309955
13	15.7	9.3	0.0	chr5	179550804	179550846	(1987413)	+	(GCGCGCT)n	Simple_repeat	1	47	(0)	3311067
30	22.4	2.2	7.1	chr5	179806610	179806746	(1731513)	+	G-rich	Low_complexity	1	140	(0)	3311613
25	18.1	1.5	3.0	chr5	179806880	179806945	(1731314)	+	G-rich	Low_complexity	1	67	(0)	3311614
229	26.7	8.7	2.5	chr5	180291405	180291523	(1246736)	C	MIRb	SINE/MIR	(50)	218	92	3312361
13	14.7	3.3	0.0	chr5	180291871	180291900	(1246359)	+	G-rich	Low_complexity	1	31	(0)	3312362
2989	27.2	4.0	1.5	chr5	180924375	180926021	(612238)	+	L1M3b	LINE/L1	2033	3399	(4166)	3313436
14	25.2	0.0	5.3	chr5	181246451	181246507	(291752)	+	(GCCCC)n	Simple_repeat	1	57	(0)	3313921
15	25.2	4.3	2.8	chr6	2245428	2245498	(168560481)	+	(GGCG)n	Simple_repeat	1	72	(0)	3317164
647	26.3	11.2	3.1	chr6	3714698	3715147	(167090832)	+	MLT1H2	LTR/ERVL-MaLR	6	549	(0)	3319318
42	22.5	1.8	6.9	chr6	4776143	4776313	(166029666)	+	(GCCCC)n	Simple_repeat	1	174	(0)	3321052
475	29.8	6.7	8.3	chr6	5443347	5443683	(165362296)	+	MLT1H	LTR/ERVL-MaLR	22	352	(197)	3322042
2015	22.0	11.7	4.9	chr6	6469792	6470298	(164335681)	+	MLT1H	LTR/ERVL-MaLR	4	549	(0)	3323443
15	18.8	7.0	1.6	chr6	7541463	7541519	(163264460)	+	(GGCGCAG)n	Simple_repeat	1	61	(0)	3325356
12	9.3	5.0	7.1	chr6	7541708	7541747	(163264232)	+	(CTCCCG)n	Simple_repeat	1	42	(0)	3325357
1319	26.7	3.9	2.5	chr6	10645300	10645702	(160160277)	+	L1M7	LINE/L1	18	426	(5792)	3329914
364	25.3	8.3	9.3	chr6	10645721	10645746	(160160233)	+	L1M5	LINE/L1	4010	4031	(2115)	3329915
2222	7.8	0.0	8.1	chr6	10645747	10646067	(160159912)	C	AluY	SINE/Alu	(16)	295	1	3329916
18	24.2	7.3	0.0	chr6	11044334	11044417	(159761562)	+	(CG)n	Simple_repeat	1	90	(0)	3330624
16	27.8	1.9	0.0	chr6	12012653	12012677	(158793302)	+	(GCGT)n	Simple_repeat	1	53	(0)	3332076
22	3.9	0.0	0.0	chr6	12012678	12012704	(158793275)	+	(GT)n	Simple_repeat	1	27	(0)	3332077
14	18.3	0.0	7.8	chr6	12013008	12013058	(158792921)	+	(GGTCG)n	Simple_repeat	1	51	(0)	3332078
14	18.5	7.0	0.0	chr6	12013074	12013116	(158792863)	+	GA-rich	Low_complexity	1	46	(0)	3332079
12	8.9	4.2	0.0	chr6	12013137	12013160	(158792819)	+	(CCT)n	Simple_repeat	1	25	(0)	3332080
674	16.5	3.2	0.8	chr6	13547579	13547700	(157258279)	+	Arthur1	DNA/hAT-Tip100	3571	3695	(252)	3334464
1937	9.5	1.2	0.4	chr6	13547704	13547956	(157258023)	+	7SK	RNA	1	255	(76)	3334465
738	19.7	5.0	6.3	chr6	13547997	13548090	(157257889)	+	Arthur1	DNA/hAT-Tip100	3727	3809	(138)	3334466
387	31.8	6.3	6.4	chr6	14093393	14093818	(156712161)	C	MLT1H	LTR/ERVL-MaLR	(19)	560	31	3335455
489	25.5	11.5	1.2	chr6	15661839	15662001	(155143978)	C	MIR	SINE/MIR	(52)	210	29	3338216
409	24.3	13.6	0.0	chr6	15662009	15662160	(155143819)	C	MER5B	DNA/hAT-Charlie	(2)	176	1	3338217
18	20.1	0.0	9.3	chr6	15662681	15662755	(155143224)	+	(GGCGG)n	Simple_repeat	1	75	(0)	3338218
15	30.9	1.4	1.4	chr6	15662984	15663052	(155142927)	+	(CCGGCC)n	Simple_repeat	1	70	(0)	3338219
15	5.6	0.0	0.0	chr6	15663182	15663200	(155142779)	+	(T)n	Simple_repeat	1	19	(0)	3338220
1352	15.6	0.0	1.8	chr6	18154570	18154794	(152651185)	+	AluJr4	SINE/Alu	84	304	(8)	3342549
20	23.4	1.2	6.9	chr6	18155430	18155515	(152650464)	+	(GGC)n	Simple_repeat	1	87	(0)	3342550
188	26.5	9.3	5.6	chr6	19838790	19838861	(150967118)	+	AmnSINE2	SINE/tRNA-Deu	24	98	(260)	3344999
595	26.8	5.7	11.6	chr6	22361053	22361517	(148444462)	+	L1ME3F	LINE/L1	5551	5986	(257)	3349175
448	27.1	5.7	8.5	chr6	22361579	22361885	(148444094)	C	MLT1H	LTR/ERVL-MaLR	(29)	520	223	3349176
302	31.2	1.8	0.0	chr6	22361922	22362033	(148443946)	C	MLT1H	LTR/ERVL-MaLR	(319)	170	57	3349176
2865	17.6	2.7	2.0	chr6	26470455	26471003	(144334976)	+	MLT2B3	LTR/ERVL	1	553	(1)	3355288
4454	13.0	2.9	2.8	chr6	27049957	27050749	(143755230)	+	LTR1A2	LTR/ERV1	44	837	(0)	3356200
20582	9.6	0.8	3.9	chr6	27188071	27190816	(143615163)	+	HERVKC4-int	LTR/ERVK	1	2671	(2591)	3356439
259	29.4	10.4	6.4	chr6	27388386	27388541	(143417438)	+	MER5A	DNA/hAT-Charlie	27	189	(0)	3356814
2229	9.2	0.7	0.7	chr6	27672004	27672297	(143133682)	C	AluSz	SINE/Alu	(18)	294	1	3357340
692	6.0	0.0	0.0	chr6	27672448	27672531	(143133448)	C	tRNA-Ser-TCG	tRNA	(1)	84	1	3357341
1107	23.2	11.8	1.6	chr6	28446530	28446892	(142359087)	+	L1ME3A	LINE/L1	5486	5890	(283)	3358631
272	33.0	13.7	3.1	chr6	33390848	33391075	(137414904)	+	MIRb	SINE/MIR	4	259	(9)	3366376
291	26.6	12.7	3.1	chr6	33580499	33580626	(137225353)	C	MIRb	SINE/MIR	(16)	252	111	3366772
353	34.4	9.8	8.1	chr6	37432142	37432760	(133373219)	C	L2c	LINE/L2	(439)	2980	2350	3374684
204	20.0	6.2	0.0	chr6	37432913	37432957	(133373022)	+	MIRc	SINE/MIR	111	158	(110)	3374683
13	28.9	0.0	0.0	chr6	37433291	37433332	(133372647)	+	(GGC)n	Simple_repeat	1	42	(0)	3374686
13	27.1	0.0	3.9	chr6	37433376	37433427	(133372552)	+	(GCGG)n	Simple_repeat	1	52	(0)	3374687
35	32.1	0.0	3.2	chr6	37819784	37819806	(132986173)	+	(CCCGCC)n	Simple_repeat	1	35	(115)	3375438
19	11.5	8.1	4.5	chr6	37819807	37819868	(132986111)	+	(CGCC)n	Simple_repeat	1	67	(0)	3375439
35	32.1	0.0	3.2	chr6	37819869	37819939	(132986040)	+	(CCCGCC)n	Simple_repeat	36	150	(0)	3375438
19	29.4	3.2	4.1	chr6	37820031	37820194	(132985785)	+	G-rich	Low_complexity	1	162	(0)	3375440
13	20.7	4.3	2.1	chr6	41967295	41967340	(128838639)	+	(AATG)n	Simple_repeat	1	48	(0)	3382203
382	24.8	16.1	0.7	chr6	41967378	41967512	(128838467)	+	MIRb	SINE/MIR	31	185	(23)	3382204
411	26.2	10.5	0.0	chr6	41967522	41967666	(128838313)	C	MER5A1	DNA/hAT-Charlie	(4)	162	1	3382205
14	39.3	1.1	1.1	chr6	43171522	43171610	(127634369)	+	(GCG)n	Simple_repeat	1	90	(0)	3384861
16	12.7	0.0	5.3	chr6	43770122	43770159	(127035820)	+	G-rich	Low_complexity	1	38	(0)	3385988
804	28.9	14.0	0.3	chr6	45681791	45682165	(125123814)	+	MLT1H	LTR/ERVL-MaLR	12	446	(103)	3388992
21	22.7	0.0	0.0	chr6	47016212	47016257	(123789722)	+	(GT)n	Simple_repeat	1	46	(0)	3391087
412	33.0	9.7	8.7	chr6	47988200	47988490	(122817489)	+	L1MEd	LINE/L1	549	851	(5391)	3392574
2102	12.4	2.0	0.8	chr6	47988491	47988841	(122817138)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3392575
2993	0.3	0.0	0.3	chr6	52995620	52995951	(117810028)	+	7SK	RNA	1	331	(0)	3399374
658	20.6	5.4	4.9	chr6	56103107	56103290	(114702689)	+	MER5A	DNA/hAT-Charlie	2	186	(3)	3403748
30	30.2	2.4	2.3	chr6	68635173	68635298	(102170681)	+	(GC)n	Simple_repeat	1	129	(0)	3416917
16	15.3	2.7	0.0	chr6	68635444	68635480	(102170499)	+	A-rich	Low_complexity	1	38	(0)	3416918
3422	22.2	2.7	2.5	chr6	69511302	69512373	(101293606)	+	L1P4e	LINE/L1	1154	2226	(4559)	3417997
1640	12.9	5.6	3.7	chr6	69512382	69512678	(101293301)	+	THE1B	LTR/ERVL-MaLR	1	303	(61)	3417998
1544	25.4	11.8	1.1	chr6	69859261	69859730	(100946249)	+	MLT1H	LTR/ERVL-MaLR	21	547	(2)	3418515
36	4.5	2.2	0.0	chr6	71886599	71886644	(98919335)	+	(GCCCCA)n	Simple_repeat	1	47	(0)	3421175
26	19.7	1.7	0.0	chr6	71886865	71886923	(98919056)	+	(GCT)n	Simple_repeat	1	60	(0)	3421176
468	29.6	14.5	3.3	chr6	73796020	73796634	(97009345)	+	L2a	LINE/L2	2610	3368	(19)	3424248
1534	29.1	6.1	2.9	chr6	76525082	76525573	(94280406)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	41	3427766
6996	18.8	2.7	2.7	chr6	78206965	78208427	(92597552)	C	THE1C-int	LTR/ERVL-MaLR	(118)	1462	1	3429685
16	19.9	0.0	2.4	chr6	79234607	79234648	(91571331)	+	(GCTGCC)n	Simple_repeat	1	42	(0)	3430987
311	28.2	9.2	10.6	chr6	79631261	79631458	(91174521)	+	L1M4b	LINE/L1	293	487	(6380)	3431532
864	28.2	8.7	8.5	chr6	80045814	80046661	(90759318)	C	L1M5	LINE/L1	(1527)	4619	3770	3432119
450	27.3	4.7	3.8	chr6	80046667	80046870	(90759109)	C	MLT1H	LTR/ERVL-MaLR	(0)	591	289	3432121
889	27.8	15.9	0.3	chr6	80046877	80047251	(90758728)	C	LTR16A	LTR/ERVL	(6)	445	1	3432122
1271	26.3	6.7	5.4	chr6	84972806	84973323	(85832656)	+	MLT1H	LTR/ERVL-MaLR	11	535	(14)	3438482
421	13.0	2.5	0.0	chr6	84973366	84973442	(85832537)	C	MSTD	LTR/ERVL-MaLR	(2)	394	316	3438483
326	29.3	5.8	4.7	chr6	87205636	87205889	(83600090)	C	L1M5	LINE/L1	(2831)	3315	3059	3441212
491	29.5	16.3	0.0	chr6	87206132	87206321	(83599658)	C	MLT1H	LTR/ERVL-MaLR	(322)	227	1	3441220
397	30.8	3.9	3.3	chr6	87405431	87405581	(83400398)	C	MIRb	SINE/MIR	(10)	258	107	3441513
281	28.6	4.8	3.0	chr6	87405598	87405698	(83400281)	C	MLT1H	LTR/ERVL-MaLR	(16)	533	431	3441514
644	25.5	10.3	0.9	chr6	87405799	87406008	(83399971)	C	MLT1H	LTR/ERVL-MaLR	(292)	257	26	3441514
350	32.1	9.1	3.7	chr6	87968898	87969114	(82836865)	+	MIR	SINE/MIR	24	253	(9)	3442515
232	19.1	2.1	0.0	chr6	90001046	90001092	(80804887)	C	MIR3	SINE/MIR	(34)	174	127	3445764
375	21.9	11.0	0.0	chr6	90001112	90001216	(80804763)	+	L2a	LINE/L2	1654	1771	(1648)	3445765
1342	15.6	1.2	0.4	chr6	90001268	90001506	(80804473)	C	7SK	RNA	(90)	241	1	3445766
332	20.0	6.8	4.3	chr6	90001514	90001628	(80804351)	C	MLT1J2	LTR/ERVL-MaLR	(41)	407	290	3445767
31	0.0	0.0	0.0	chr6	90065271	90065299	(80740680)	+	(T)n	Simple_repeat	1	29	(0)	3445850
544	22.4	11.2	3.3	chr6	90065316	90065416	(80740563)	+	MLT1H2	LTR/ERVL-MaLR	219	332	(157)	3445849
906	19.2	10.4	1.5	chr6	90065417	90065617	(80740362)	C	MER58A	DNA/hAT-Charlie	(2)	222	2	3445851
544	22.4	11.2	3.3	chr6	90065618	90065760	(80740219)	+	MLT1H2	LTR/ERVL-MaLR	333	484	(5)	3445849
16	5.2	0.0	0.0	chr6	90330819	90330852	(80475127)	+	(TG)n	Simple_repeat	1	34	(0)	3446230
420	30.1	11.0	0.0	chr6	90812967	90813112	(79992867)	C	MIR3	SINE/MIR	(0)	208	45	3446898
230	27.5	8.1	0.0	chr6	90813116	90813206	(79992773)	C	L2a	LINE/L2	(2)	3424	3326	3446899
11174	8.6	1.2	0.3	chr6	90813276	90815610	(79990369)	C	L1PA11	LINE/L1	(0)	6174	3818	3446900
5649	11.0	0.4	1.5	chr6	90879499	90880215	(79925764)	C	L1PB1	LINE/L1	(1)	6866	6151	3446985
1292	27.3	8.2	10.1	chr6	95169783	95170514	(75635465)	+	MER21C	LTR/ERVL	6	816	(122)	3452148
2292	12.9	5.3	0.0	chr6	102900962	102901318	(67904661)	+	MER51B	LTR/ERV1	1	377	(0)	3462094
2227	15.6	0.8	2.1	chr6	102901319	102901593	(67904386)	C	THE1D	LTR/ERVL-MaLR	(105)	276	1	3462092
13	23.8	2.2	2.1	chr6	104859847	104859892	(65946087)	+	(CCG)n	Simple_repeat	1	47	(0)	3464541
25	21.4	9.3	2.1	chr6	105402895	105403023	(65402956)	+	G-rich	Low_complexity	1	141	(0)	3465369
14	14.6	0.0	3.1	chr6	105403119	105403171	(65402808)	+	(CGG)n	Simple_repeat	1	51	(0)	3465370
240	40.6	5.7	5.2	chr6	106630135	106630534	(64175445)	+	L2	LINE/L2	2295	2696	(723)	3467230
60	18.2	1.6	0.8	chr6	107490249	107490375	(63315604)	+	(GCG)n	Simple_repeat	1	129	(0)	3468955
31	19.1	4.7	1.1	chr6	107490483	107490568	(63315411)	+	(CCGCCA)n	Simple_repeat	1	90	(0)	3468956
25	31.7	1.0	1.9	chr6	107490569	107490584	(63315395)	+	(CCG)n	Simple_repeat	1	103	(0)	3468957
231	21.6	0.0	0.0	chr6	108074131	108074181	(62731798)	C	MIR3	SINE/MIR	(52)	156	106	3469903
17351	16.0	2.5	2.0	chr6	110462247	110466911	(60339068)	+	L1PA17	LINE/L1	1719	6482	(377)	3473684
2661	8.2	1.6	1.1	chr6	113069563	113069934	(57736045)	C	THE1C	LTR/ERVL-MaLR	(1)	374	1	3477932
3225	23.8	7.0	5.3	chr6	113069935	113070935	(57735044)	+	L1MD2	LINE/L1	5132	6132	(227)	3477931
253	28.7	5.9	13.2	chr6	116938757	116939205	(53866774)	C	L2b	LINE/L2	(49)	3338	2934	3483271
377	16.9	4.9	0.0	chr6	117130195	117130271	(53675708)	+	MLT1H2	LTR/ERVL-MaLR	90	170	(319)	3483495
375	27.9	0.0	2.8	chr6	117130421	117130527	(53675452)	+	MLT1H2	LTR/ERVL-MaLR	382	485	(4)	3483496
5173	17.8	4.7	5.5	chr6	118627342	118628535	(52177444)	+	L1MCa	LINE/L1	6	1189	(5319)	3485405
317	16.1	3.1	0.0	chr6	118628561	118628622	(52177357)	C	SVA_C	Retroposon/SVA	(992)	392	329	3485406
461	16.9	0.0	0.0	chr6	118628568	118628672	(52177307)	+	AluSx3	SINE/Alu	215	311	(0)	3485407
270	5.7	0.0	0.0	chr6	118628680	118628714	(52177265)	+	L1MCa	LINE/L1	1188	1222	(5286)	3485405
2269	13.3	2.7	1.8	chr6	118628716	118628968	(52177011)	+	L1MC	LINE/L1	4965	5226	(920)	3485408
305	27.8	12.9	8.8	chr6	118651557	118651749	(52154230)	C	L1M4b	LINE/L1	(6265)	602	401	3485446
21	22.8	1.4	4.1	chr6	118935172	118935243	(51870736)	+	G-rich	Low_complexity	1	73	(0)	3485880
1513	25.6	7.2	1.9	chr6	118935315	118935928	(51870051)	C	L1M4	LINE/L1	(1034)	5112	4464	3485881
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
1027	16.3	7.0	2.8	chr6	119270380	119270610	(51535369)	C	L1MB8	LINE/L1	(27)	6151	5898	3486386
780	20.1	0.7	0.7	chr6	119270608	119270762	(51535217)	C	L1MC5	LINE/L1	(1308)	1683	1529	3486383
3303	26.7	11.3	3.8	chr6	119559228	119560473	(51245506)	C	MLT1H-int	LTR/ERVL-MaLR	(56)	1353	2	3486733
282	26.8	3.0	2.2	chr6	119560476	119560593	(51245386)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	389	3486733
1161	25.9	1.8	1.1	chr6	119560679	119560955	(51245024)	C	MLT1H	LTR/ERVL-MaLR	(262)	287	9	3486733
15314	12.9	1.6	0.7	chr6	125151313	125153651	(45652328)	+	Tigger1	DNA/TcMar-Tigger	55	2416	(2)	3493929
334	25.3	2.1	1.0	chr6	126124415	126124510	(44681469)	+	MLT1H	LTR/ERVL-MaLR	12	108	(441)	3495293
311	27.3	5.7	2.0	chr6	126124530	126124630	(44681349)	+	MLT1H	LTR/ERVL-MaLR	143	247	(332)	3495293
615	21.3	6.2	0.0	chr6	127161885	127162020	(43643959)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	405	3496517
812	24.6	0.5	3.0	chr6	127162128	127162328	(43643651)	C	MLT1H	LTR/ERVL-MaLR	(342)	207	12	3496517
287	27.5	0.0	0.0	chr6	130998161	130998223	(39807756)	+	MIRb	SINE/MIR	35	100	(168)	3501669
24	28.1	2.5	4.1	chr6	131135502	131135621	(39670358)	+	(GCTGCC)n	Simple_repeat	1	123	(0)	3501897
18	24.2	3.3	5.3	chr6	131135644	131135734	(39670245)	+	(CCGCCT)n	Simple_repeat	1	94	(0)	3501898
1981	16.2	0.0	0.3	chr6	131560869	131561158	(39244821)	C	AluJr	SINE/Alu	(23)	289	1	3502518
297	28.5	8.6	5.0	chr6	134093593	134093895	(36712084)	C	L1M6	LINE/L1	(5213)	1283	969	3506162
622	32.1	5.3	2.0	chr6	134094221	134094513	(36711466)	C	L1M6	LINE/L1	(5600)	896	594	3506162
11	21.2	6.8	0.0	chr6	134175662	134175705	(36630274)	+	G-rich	Low_complexity	1	47	(0)	3506325
16	20.2	5.8	4.1	chr6	134175874	134175942	(36630037)	+	GA-rich	Low_complexity	1	73	(0)	3506326
12	20.7	0.0	2.9	chr6	134175910	134175944	(36630035)	+	G-rich	Low_complexity	1	35	(0)	3506327
1037	23.7	11.3	10.4	chr6	135514680	135515179	(35290800)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	3508567
23	22.6	6.2	2.0	chr6	135851783	135851824	(34954155)	+	(TCTT)n	Simple_repeat	1	98	(0)	3509029
1221	31.2	6.7	8.3	chr6	136619098	136619415	(34186564)	C	L2b	LINE/L2	(209)	3217	2828	3510174
1120	14.1	0.0	1.6	chr6	136619416	136619602	(34186377)	C	L1MC1	LINE/L1	(0)	6333	6150	3510175
38	15.6	4.1	2.9	chr6	138987868	138987965	(31818014)	+	(CGGCTG)n	Simple_repeat	1	102	(0)	3513898
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
5008	17.8	1.9	2.7	chr6	140406974	140407178	(30398801)	C	L1M4c	LINE/L1	(4051)	2333	2129	3516009
1810	17.1	11.2	3.1	chr6	140407179	140407570	(30398409)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3516010
1227	25.2	7.1	7.0	chr6	140766947	140767492	(30038487)	+	MLT1H	LTR/ERVL-MaLR	1	547	(2)	3516457
23788	10.5	4.4	2.9	chr6	140895592	140897497	(29908482)	C	MER61-int	LTR/ERV1	(1)	3340	1408	3516606
3041	18.0	6.0	3.7	chr6	140897539	140898219	(29907760)	C	MER61-int	LTR/ERV1	(4518)	699	2	3516606
17	16.1	0.0	0.0	chr6	142846273	142846301	(27959678)	+	A-rich	Low_complexity	1	29	(0)	3519058
11	14.1	0.0	8.1	chr6	144007925	144007961	(26798018)	+	(GGACCC)n	Simple_repeat	1	37	(0)	3520695
411	24.4	9.2	0.0	chr6	144008774	144008892	(26797087)	C	MIRb	SINE/MIR	(21)	247	117	3520696
731	4.8	0.0	0.0	chr6	144216547	144216629	(26589350)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	3521045
18	18.9	4.2	0.0	chr6	145814784	145814831	(24991148)	+	(CCCGC)n	Simple_repeat	1	50	(0)	3523214
2561	10.0	5.4	8.9	chr6	146267405	146267620	(24538359)	C	MLT2A1	LTR/ERVL	(0)	444	223	3523827
69	6.2	0.0	0.0	chr6	146267621	146267704	(24538275)	+	(GGCTG)n	Simple_repeat	1	84	(0)	3523828
2561	10.0	5.4	8.9	chr6	146267705	146267948	(24538031)	C	MLT2A1	LTR/ERVL	(222)	222	1	3523827
9758	15.3	2.5	0.4	chr6	146965058	146966213	(23839766)	+	MSTA-int	LTR/ERVL-MaLR	446	1626	(5)	3524724
670	27.3	8.8	7.8	chr6	147257780	147258192	(23547787)	C	MLT1H2	LTR/ERVL-MaLR	(4)	485	68	3525170
1724	13.2	6.8	7.8	chr6	147399998	147400339	(23405640)	C	THE1D	LTR/ERVL-MaLR	(32)	349	1	3525346
9719	11.9	7.4	0.3	chr6	147400342	147401853	(23404126)	C	THE1D-int	LTR/ERVL-MaLR	(2)	1629	3	3525346
14	5.0	0.0	0.0	chr6	149718040	149718060	(21087919)	+	(GCC)n	Simple_repeat	1	21	(0)	3529015
1394	17.8	0.3	5.8	chr6	150057179	150057488	(20748491)	C	L1P4	LINE/L1	(1441)	4705	4413	3529597
11	26.6	5.6	2.7	chr6	150599796	150599812	(20206167)	+	G-rich	Low_complexity	1	29	(46)	3530476
15	14.9	0.0	0.0	chr6	150599813	150599842	(20206137)	+	(GGGGC)n	Simple_repeat	1	30	(0)	3530477
11	26.6	5.6	2.7	chr6	150599843	150599866	(20206113)	+	G-rich	Low_complexity	30	75	(0)	3530476
29	3.2	0.0	0.0	chr6	150599879	150599910	(20206069)	+	(GAGCCC)n	Simple_repeat	1	32	(0)	3530478
18	6.8	0.0	5.7	chr6	151390752	151390786	(19415193)	+	(CCCTC)n	Simple_repeat	1	35	(0)	3531911
15	20.1	0.0	0.0	chr6	151390815	151390866	(19415113)	+	(GCA)n	Simple_repeat	1	52	(0)	3531912
23	25.1	2.6	1.3	chr6	151391001	151391077	(19414902)	+	(CCTC)n	Simple_repeat	1	79	(0)	3531913
24	21.4	3.0	1.4	chr6	151391468	151391582	(19414397)	+	(GCG)n	Simple_repeat	1	116	(0)	3531914
409	28.7	2.9	0.0	chr6	154537390	154537525	(16268454)	+	hAT-N1_Mam	DNA/hAT-Tip100?	112	251	(89)	3536572
32	21.5	5.6	3.0	chr6	154995190	154995314	(15810665)	+	G-rich	Low_complexity	1	132	(0)	3537437
4099	10.8	2.1	5.5	chr6	156359412	156360045	(14445934)	+	LTR9	LTR/ERV1	1	612	(0)	3539341
1355	25.5	7.9	5.0	chr6	156360046	156360352	(14445627)	+	MER70A	LTR/ERVL	162	472	(0)	3539340
20	20.5	3.6	0.0	chr6	156777192	156777247	(14028732)	+	(CGGCCC)n	Simple_repeat	1	58	(0)	3539992
13	4.7	0.0	4.2	chr6	157275099	157275122	(13530857)	+	(GGGA)n	Simple_repeat	1	24	(0)	3540654
12	27.6	3.9	0.0	chr6	157275184	157275235	(13530744)	+	(GAGGCGG)n	Simple_repeat	1	54	(0)	3540655
769	26.2	11.9	11.1	chr6	157275258	157275528	(13530451)	C	MLT1C	LTR/ERVL-MaLR	(38)	429	125	3540656
15218	11.8	3.1	3.5	chr6	157350176	157352572	(13453407)	+	Tigger1	DNA/TcMar-Tigger	33	2418	(0)	3540767
1127	5.2	0.0	0.7	chr6	158168816	158168951	(12637028)	+	AluSx	SINE/Alu	1	135	(177)	3542063
1564	18.7	0.7	2.5	chr6	158496866	158497148	(12308831)	C	AluJr	SINE/Alu	(30)	282	5	3542628
298	35.4	3.9	7.0	chr6	163012721	163012878	(7793101)	+	L2b	LINE/L2	3217	3369	(6)	3548934
36	5.0	0.0	0.0	chr6	163414675	163414716	(7391263)	+	(GAG)n	Simple_repeat	1	42	(0)	3549419
13	14.7	3.3	0.0	chr6	163414729	163414758	(7391221)	+	(GCG)n	Simple_repeat	1	31	(0)	3549420
20	27.9	1.3	1.3	chr6	163414841	163414930	(7391049)	+	(CGCCCGC)n	Simple_repeat	1	90	(0)	3549421
452	27.2	5.0	4.0	chr6	164766943	164767171	(6038808)	C	MLT1H	LTR/ERVL-MaLR	(269)	280	5	3551164
2146	14.5	2.4	3.9	chr6	164864231	164864571	(5941408)	C	THE1D	LTR/ERVL-MaLR	(40)	341	1	3551282
1104	30.3	5.2	2.9	chr6	164864572	164864746	(5941233)	C	L1MDb	LINE/L1	(6179)	361	182	3551281
74	20.8	4.8	4.9	chr6	167826767	167827057	(2978922)	+	(GGC)n	Simple_repeat	1	305	(0)	3554843
13	10.7	3.1	3.0	chr6	167827074	167827105	(2978874)	+	(CGGCCC)n	Simple_repeat	1	33	(0)	3554844
19	18.8	4.0	5.2	chr6	167827252	167827325	(2978654)	+	(GCGCC)n	Simple_repeat	1	77	(0)	3554845
18	12.0	0.0	0.0	chr6	169725644	169725670	(1080309)	+	(A)n	Simple_repeat	1	27	(0)	3556771
2082	14.4	4.6	1.8	chr6	169725737	169726118	(1079861)	+	MER65A	LTR/ERV1	53	445	(0)	3556772
11	16.0	4.3	6.1	chr6	170167898	170167944	(638035)	+	(CAGCCC)n	Simple_repeat	1	49	(0)	3557201
13	26.8	2.2	0.0	chr6	170584448	170584492	(221487)	+	(CCCG)n	Simple_repeat	1	46	(0)	3557615
471	31.9	4.0	0.6	chr7	904337	904503	(158441470)	+	MIRb	SINE/MIR	48	220	(48)	3559040
13	14.9	5.1	2.4	chr7	1160308	1160346	(158185627)	+	(CCCGC)n	Simple_repeat	1	41	(0)	3559395
258	31.2	2.1	0.0	chr7	1160610	1160702	(158185271)	C	L1MC4	LINE/L1	(17)	7978	7897	3559396
511	19.8	1.9	0.0	chr7	2631213	2631318	(156714655)	C	MIRc	SINE/MIR	(112)	156	49	3561760
251	31.6	1.7	5.0	chr7	2884024	2884143	(156461830)	C	MIR3	SINE/MIR	(33)	175	60	3562203
1892	19.4	4.7	1.1	chr7	2946979	2947411	(156398562)	C	Charlie4a	DNA/hAT-Charlie	(40)	468	20	3562340
659	22.0	4.1	0.9	chr7	2947832	2948042	(156397931)	+	L1MC5a	LINE/L1	573	790	(1987)	3562341
1705	14.8	0.0	2.9	chr7	4746431	4746708	(154599265)	+	AluJr	SINE/Alu	34	303	(9)	3565495
14	3.6	0.0	11.1	chr7	4746851	4746886	(154599087)	+	(GTCCCT)n	Simple_repeat	1	36	(0)	3565496
12	29.4	1.6	3.2	chr7	5513497	5513558	(153832415)	+	(GGTCGG)n	Simple_repeat	1	63	(0)	3567204
230	33.6	15.0	3.8	chr7	5513927	5514323	(153831650)	+	L2a	LINE/L2	2921	3426	(0)	3567205
13	9.4	8.3	2.6	chr7	6059100	6059135	(153286838)	+	(GCCCA)n	Simple_repeat	1	39	(0)	3568487
17	13.3	7.1	0.0	chr7	6590130	6590171	(152755802)	+	(GCAG)n	Simple_repeat	1	45	(0)	3569752
1519	7.5	4.2	0.8	chr7	6590230	6590483	(152755490)	+	Charlie17b	DNA/hAT-Charlie	158	420	(784)	3569753
13	26.3	1.6	4.6	chr7	7968727	7968790	(151377183)	+	G-rich	Low_complexity	1	65	(0)	3571872
19	12.1	2.8	0.0	chr7	7968827	7968862	(151377111)	+	(GCG)n	Simple_repeat	1	37	(0)	3571873
309	30.2	10.4	6.4	chr7	7969024	7969225	(151376748)	C	L1M4b	LINE/L1	(6249)	618	408	3571874
13	4.1	0.0	9.7	chr7	8261747	8261777	(151084196)	+	(GGTG)n	Simple_repeat	1	31	(0)	3572278
12	16.0	0.0	3.3	chr7	8262052	8262081	(151083892)	+	(CCCGC)n	Simple_repeat	1	30	(0)	3572279
909	8.4	20.6	0.5	chr7	12876684	12876882	(146469091)	+	7SK	RNA	1	239	(92)	3577983
454	31.8	17.3	4.3	chr7	15087702	15088162	(144257811)	+	MLT1H	LTR/ERVL-MaLR	1	533	(16)	3580816
15	26.5	0.0	0.0	chr7	15839418	15839451	(143506522)	+	(TT)n	Simple_repeat	1	34	(0)	3581764
56	0.0	0.0	0.0	chr7	21031839	21031886	(138314087)	+	(AT)n	Simple_repeat	1	48	(0)	3588624
531	22.7	8.3	0.0	chr7	21327743	21327852	(138018121)	+	FLAM_C	SINE/Alu	2	121	(22)	3589071
1000	16.9	1.6	2.7	chr7	21327855	21327879	(138018094)	+	AluJb	SINE/Alu	126	150	(162)	3589072
4664	9.8	0.5	0.2	chr7	21327880	21328511	(138017462)	C	MER51A	LTR/ERV1	(0)	634	1	3589073
4081	18.8	3.0	1.7	chr7	21740216	21741452	(137604521)	C	L1MB3	LINE/L1	(8)	6175	5190	3589676
424	19.5	19.1	0.8	chr7	21741734	21741857	(137604116)	C	MLT1H	LTR/ERVL-MaLR	(366)	183	32	3589677
657	21.2	11.1	9.8	chr7	22400625	22400942	(136945031)	+	MLT1H	LTR/ERVL-MaLR	227	549	(0)	3590604
282	24.1	10.4	5.1	chr7	23598095	23598212	(135747761)	+	MIRb	SINE/MIR	16	147	(121)	3592698
1717	27.1	3.1	3.7	chr7	26939944	26940456	(132405517)	+	MLT1J	LTR/ERVL-MaLR	1	510	(2)	3597763
17	20.6	0.0	0.0	chr7	28603731	28603769	(130742204)	+	(TTAG)n	Simple_repeat	1	39	(0)	3600299
15	13.7	7.5	0.0	chr7	30134912	30134951	(129211022)	+	(GGAGGC)n	Simple_repeat	1	43	(0)	3602682
14	20.1	2.0	4.0	chr7	30134949	30134997	(129210976)	+	(GCCCGCC)n	Simple_repeat	1	50	(0)	3602683
13	31.6	1.6	1.5	chr7	30135014	30135077	(129210896)	+	(CCGGC)n	Simple_repeat	1	65	(0)	3602684
13353	12.7	2.9	3.4	chr7	30480440	30482647	(128863326)	+	HERVH-int	LTR/ERV1	801	2995	(4718)	3603187
2781	15.1	0.2	0.7	chr7	30482627	30483081	(128862892)	+	HERVH-int	LTR/ERV1	3140	3592	(4121)	3603187
8084	14.5	0.7	0.9	chr7	30483075	30484480	(128861493)	+	HERVH-int	LTR/ERV1	3813	5149	(2564)	3603187
14	21.7	4.0	1.9	chr7	32942604	32942653	(126403320)	+	(GCCGCG)n	Simple_repeat	1	52	(0)	3607043
782	23.5	11.8	8.6	chr7	33392162	33392628	(125953345)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	4	3607782
22	0.0	7.9	2.4	chr7	33912118	33912155	(125433818)	+	(AAAC)n	Simple_repeat	1	41	(0)	3608580
29	7.5	0.0	0.0	chr7	35037001	35037043	(124308930)	+	(GGGAG)n	Simple_repeat	1	43	(0)	3610092
197	32.5	19.3	2.4	chr7	35398739	35398905	(123947068)	+	L2c	LINE/L2	3004	3205	(182)	3610611
16	13.9	0.0	2.9	chr7	35400380	35400413	(123945560)	+	(TTTC)n	Simple_repeat	1	34	(0)	3610613
1299	20.9	9.8	0.0	chr7	35400579	35400846	(123945127)	C	Tigger9b	DNA/TcMar-Tigger	(327)	297	1	3610612
13	27.2	3.4	5.5	chr7	39949956	39950043	(119395930)	+	(CCCAG)n	Simple_repeat	1	91	(0)	3617485
12	28.6	0.0	0.0	chr7	39950133	39950171	(119395802)	+	GA-rich	Low_complexity	1	39	(0)	3617486
4409	16.9	3.9	2.1	chr7	41761715	41761965	(117584008)	C	MER4D	LTR/ERV1	(0)	903	658	3620296
2025	13.0	13.8	1.3	chr7	41761966	41762339	(117583634)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3620297
17	0.0	0.0	0.0	chr7	42932702	42932720	(116413253)	+	(A)n	Simple_repeat	1	19	(0)	3621861
3071	15.8	7.0	1.3	chr7	42932766	42933388	(116412585)	C	MER67B	LTR/ERV1	(0)	661	1	3621862
771	9.3	0.0	0.0	chr7	43096732	43096839	(116249134)	+	HY1	scRNA	1	108	(11)	3622094
2424	12.4	7.5	0.5	chr7	43096840	43097237	(116248736)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3622095
268	23.5	5.5	1.2	chr7	43569443	43569528	(115776445)	+	MLT1H	LTR/ERVL-MaLR	1	90	(459)	3622811
251	29.4	4.5	9.1	chr7	43569620	43569806	(115776167)	+	MLT1H	LTR/ERVL-MaLR	223	400	(149)	3622811
13	24.0	1.9	3.7	chr7	44082775	44082827	(115263146)	+	(GGCGG)n	Simple_repeat	1	54	(0)	3623779
347	28.4	11.1	2.5	chr7	44083067	44083304	(115262669)	+	L1ME4a	LINE/L1	4897	5157	(989)	3623780
32	5.3	0.0	0.0	chr7	50450392	50450430	(108895543)	+	(CGTG)n	Simple_repeat	1	39	(0)	3632383
12	18.4	5.4	0.0	chr7	50450432	50450468	(108895505)	+	G-rich	Low_complexity	1	39	(0)	3632384
569	21.3	18.4	2.2	chr7	52018340	52018679	(107327294)	C	MLT1E1A	LTR/ERVL-MaLR	(265)	415	2	3634362
1826	27.9	1.5	4.2	chr7	52018748	52019106	(107326867)	+	LTR108d_Mam	LTR/ERVL	6	357	(187)	3634363
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
1855	8.7	0.0	0.0	chr7	64902739	64902979	(94442994)	C	MER4A1	LTR/ERV1	(231)	241	1	3646910
17047	15.6	1.9	0.9	chr7	65403922	65406831	(93939142)	+	HUERS-P3-int	LTR/ERV1	1050	3990	(4929)	3647795
491	24.8	11.0	0.7	chr7	67562900	67563037	(91782936)	C	MIRb	SINE/MIR	(62)	206	53	3652523
896	30.7	16.2	2.3	chr7	67563102	67563549	(91782424)	C	MLT1H	LTR/ERVL-MaLR	(14)	535	24	3652524
550	29.7	3.8	1.1	chr7	67766717	67766893	(91579080)	+	MIRb	SINE/MIR	42	223	(45)	3652975
962	24.9	16.2	7.0	chr7	67766894	67767338	(91578635)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	56	3652976
78	4.4	1.1	1.0	chr7	68715206	68715300	(90630673)	+	(CTTCT)n	Simple_repeat	1	96	(0)	3655054
14	8.1	3.9	0.0	chr7	68715474	68715499	(90630474)	+	(ATT)n	Simple_repeat	1	27	(0)	3655055
893	20.7	0.0	0.6	chr7	68715502	68715671	(90630302)	+	AluJb	SINE/Alu	1	169	(143)	3655056
12	18.3	0.0	7.0	chr7	70631267	70631312	(88714661)	+	G-rich	Low_complexity	1	42	(0)	3658594
1623	23.3	10.2	5.0	chr7	71707485	71708003	(87637970)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	3660771
985	20.2	0.0	2.6	chr7	73382879	73383071	(85962902)	+	AluJb	SINE/Alu	125	312	(0)	3664482
1368	21.7	11.4	2.3	chr7	73383076	73383424	(85962549)	+	MLT1H	LTR/ERVL-MaLR	165	549	(0)	3664483
1056	23.5	5.0	7.1	chr7	73383425	73383692	(85962281)	+	L1MEd	LINE/L1	1092	1375	(5711)	3664477
219	28.5	13.8	3.4	chr7	73520450	73520598	(85825375)	+	MIR3	SINE/MIR	37	203	(5)	3664802
12	20.2	0.0	6.7	chr7	73738869	73738913	(85607060)	+	(CCGCC)n	Simple_repeat	1	45	(0)	3665345
12	27.8	3.1	3.0	chr7	75073438	75073501	(84272472)	+	G-rich	Low_complexity	1	66	(0)	3668724
23	14.7	5.3	5.1	chr7	75073665	75073739	(84272234)	+	(GCCCCA)n	Simple_repeat	1	79	(0)	3668725
14	11.0	7.3	2.3	chr7	77121778	77121818	(82224155)	+	(CCGCACG)n	Simple_repeat	1	44	(0)	3673310
2287	20.7	7.0	7.7	chr7	77231526	77232290	(82113683)	C	L1M4a2	LINE/L1	(1238)	1418	660	3673473
327	30.6	4.1	6.8	chr7	77232319	77232665	(82113308)	C	L1M4b	LINE/L1	(5646)	1221	646	3673469
2172	16.9	4.7	0.2	chr7	80309314	80309722	(79036251)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3677999
35	0.0	2.8	0.0	chr7	80919560	80919595	(78426378)	+	(TTTTGTT)n	Simple_repeat	1	37	(0)	3678794
20	22.9	1.8	0.0	chr7	87875963	87876018	(71469955)	+	(GGCTCC)n	Simple_repeat	1	57	(0)	3687770
19	28.2	1.6	7.2	chr7	87876335	87876457	(71469516)	+	G-rich	Low_complexity	1	125	(0)	3687771
18	0.0	0.0	0.0	chr7	87934661	87934680	(71411293)	+	(T)n	Simple_repeat	1	20	(0)	3687846
7524	16.2	9.5	1.4	chr7	88031214	88032662	(71313311)	+	MSTA-int	LTR/ERVL-MaLR	3	1580	(0)	3687986
1928	17.6	10.8	1.3	chr7	88032664	88033049	(71312924)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	3687986
2042	15.7	1.9	3.2	chr7	89813838	89814206	(69531767)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3690237
18	22.7	0.0	0.0	chr7	91264494	91264539	(68081434)	+	(GGAGGC)n	Simple_repeat	1	46	(0)	3692227
12	5.5	0.0	0.0	chr7	91264708	91264726	(68081247)	+	(GCG)n	Simple_repeat	1	19	(0)	3692228
18	16.2	2.3	2.3	chr7	91265042	91265084	(68080889)	+	(GCT)n	Simple_repeat	1	44	(0)	3692229
21	17.9	0.0	3.7	chr7	91265086	91265139	(68080834)	+	G-rich	Low_complexity	1	54	(0)	3692230
13	23.8	2.2	2.1	chr7	91265132	91265183	(68080790)	+	(GCA)n	Simple_repeat	1	52	(0)	3692231
6914	25.6	4.8	3.4	chr7	91706876	91709369	(67636604)	+	L1MA4A	LINE/L1	7	2536	(4313)	3692794
459	22.6	0.0	0.0	chr7	91845354	91845446	(67500527)	+	MLT1H	LTR/ERVL-MaLR	347	439	(110)	3692960
51	5.4	0.0	0.0	chr7	97006052	97006110	(62339863)	+	(GCA)n	Simple_repeat	1	59	(0)	3700154
25	3.1	0.0	0.0	chr7	97006111	97006143	(62339830)	+	(CGC)n	Simple_repeat	1	33	(0)	3700155
16	4.3	0.0	3.9	chr7	97006204	97006229	(62339744)	+	(CGG)n	Simple_repeat	1	26	(0)	3700156
31	3.1	0.0	0.0	chr7	97006233	97006265	(62339708)	+	(CAC)n	Simple_repeat	1	33	(0)	3700157
13	18.7	0.0	5.0	chr7	97871802	97871841	(61474132)	+	G-rich	Low_complexity	1	40	(0)	3701403
81	31.2	2.1	5.0	chr7	98400244	98400714	(60945259)	+	G-rich	Low_complexity	1	481	(0)	3702486
285	26.7	3.8	2.9	chr7	98401665	98401768	(60944205)	+	MamRep4096	DNA/hAT-Tip100	4	108	(318)	3702487
2262	6.0	0.0	0.8	chr7	98406590	98406857	(60939116)	C	AluSg	SINE/Alu	(44)	266	1	3702501
1904	11.7	6.1	1.4	chr7	98406866	98407146	(60938827)	C	AluSz	SINE/Alu	(16)	296	2	3702502
452	17.8	0.0	0.0	chr7	101641169	101641241	(57704732)	+	LTR53B	LTR/ERVL	461	533	(0)	3709290
308	32.0	14.4	1.7	chr7	101641242	101641416	(57704557)	+	MLT1I	LTR/ERVL-MaLR	102	302	(109)	3709291
274	29.7	4.2	1.1	chr7	101641476	101641567	(57704406)	+	MLT1I	LTR/ERVL-MaLR	382	476	(13)	3709291
819	28.8	8.6	4.2	chr7	101641593	101641757	(57704216)	C	L1ME3F	LINE/L1	(333)	5861	5679	3709279
2308	16.3	2.1	0.4	chr7	102856996	102857451	(56488522)	+	L1MA5	LINE/L1	4897	5360	(783)	3711843
1459	11.6	2.1	0.8	chr7	102857452	102857685	(56488288)	+	7SK	RNA	3	239	(92)	3711844
4995	13.4	5.9	0.3	chr7	102857686	102858576	(56487397)	+	L1MA5	LINE/L1	5357	6300	(0)	3711843
26	0.0	0.0	0.0	chr7	103141241	103141265	(56204708)	+	(T)n	Simple_repeat	1	25	(0)	3712280
22	11.3	0.0	0.0	chr7	105521796	105521833	(53824140)	+	(CGGGGAG)n	Simple_repeat	1	38	(0)	3716040
18	16.4	0.0	2.7	chr7	105521971	105522021	(53823952)	+	G-rich	Low_complexity	1	49	(0)	3716041
2262	12.1	4.7	2.8	chr7	106005927	106006282	(53339691)	C	THE1B	LTR/ERVL-MaLR	(1)	363	1	3716949
12307	8.3	0.3	0.0	chr7	106006283	106007857	(53338116)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3716949
1881	15.9	12.2	2.8	chr7	107442036	107442422	(51903551)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3719107
13	16.2	0.0	0.0	chr7	108526157	108526184	(50819789)	+	(CCCGC)n	Simple_repeat	1	28	(0)	3720663
26	10.3	7.6	2.8	chr7	108526347	108526412	(50819561)	+	(CGTG)n	Simple_repeat	1	71	(0)	3720664
18	7.8	0.0	0.0	chr7	114922577	114922603	(44423370)	+	(GGA)n	Simple_repeat	1	27	(0)	3729032
504	28.1	3.6	6.3	chr7	116518717	116519056	(42826917)	+	MLT1H	LTR/ERVL-MaLR	108	533	(16)	3731156
1915	8.5	3.0	1.5	chr7	121047718	121047976	(38297997)	C	AluYj4	SINE/Alu	(19)	292	30	3737160
5100	16.4	0.6	0.1	chr7	121650305	121651108	(37694865)	+	THE1D-int	LTR/ERVL-MaLR	774	1581	(50)	3738012
2331	15.4	3.5	1.2	chr7	121651133	121651546	(37694427)	+	MSTA	LTR/ERVL-MaLR	1	424	(4)	3738013
29	16.1	0.0	0.0	chr7	121873273	121873328	(37472645)	+	(CTCTCT)n	Simple_repeat	1	56	(0)	3738330
13	8.5	0.0	3.7	chr7	122144145	122144171	(37201802)	+	(CCTCT)n	Simple_repeat	1	27	(0)	3738703
1579	23.7	2.0	3.9	chr7	123643366	123643830	(35702143)	+	L1MB8	LINE/L1	5709	6164	(14)	3740739
566	32.0	19.4	0.8	chr7	125074510	125075085	(34270888)	C	L2a	LINE/L2	(56)	3370	2673	3742689
1580	13.4	13.3	1.3	chr7	125075086	125075388	(34270585)	+	MSTA	LTR/ERVL-MaLR	1	345	(83)	3742690
694	15.6	0.9	0.0	chr7	125075393	125075501	(34270472)	C	MSTA	LTR/ERVL-MaLR	(318)	110	1	3742691
2391	14.4	0.3	0.5	chr7	126057671	126058046	(33287927)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3743941
27	0.0	0.0	3.3	chr7	128361727	128361756	(30984217)	+	(CCT)n	Simple_repeat	1	30	(0)	3747076
436	33.4	11.9	0.8	chr7	129059618	129060012	(30285961)	C	L2c	LINE/L2	(684)	2735	2291	3748377
31	29.5	2.4	1.5	chr7	129224897	129225023	(30120950)	+	G-rich	Low_complexity	1	130	(0)	3748759
19	32.7	0.0	1.2	chr7	129225229	129225309	(30120664)	+	(GGCCCC)n	Simple_repeat	1	81	(0)	3748760
57	5.1	0.0	0.0	chr7	129798216	129798277	(29547696)	+	(CA)n	Simple_repeat	1	62	(0)	3749854
12	11.5	3.3	3.2	chr7	129798585	129798614	(29547359)	+	(CCCA)n	Simple_repeat	1	31	(0)	3749855
266	33.1	0.0	4.2	chr7	129824603	129824667	(29521306)	C	MLT1J	LTR/ERVL-MaLR	(74)	438	374	3749921
910	24.5	7.9	6.8	chr7	129824681	129825091	(29520882)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	143	3749923
240	22.6	6.1	0.0	chr7	130440616	130440677	(28905296)	+	L2c	LINE/L2	3253	3318	(69)	3751166
18	23.7	0.0	6.8	chr7	130440761	130440833	(28905140)	+	(GCCCC)n	Simple_repeat	1	73	(0)	3751167
314	14.6	0.0	0.0	chr7	131188183	131188230	(28157743)	C	L4_B_Mam	LINE/RTE-X	(177)	4764	4717	3752323
2134	22.2	7.4	0.8	chr7	131188269	131188771	(28157202)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	11	3752324
21	22.2	0.0	3.3	chr7	132044836	132044896	(27301077)	+	(CACCAC)n	Simple_repeat	1	61	(0)	3753859
201	26.3	6.6	0.0	chr7	132379192	132379248	(26966725)	+	L3b	LINE/CR1	3956	4016	(83)	3754314
348	34.3	8.1	5.9	chr7	132379433	132379694	(26966279)	+	L2c	LINE/L2	3130	3380	(7)	3754315
228	30.1	7.7	3.4	chr7	132379654	132379801	(26966172)	C	MIR1_Amn	SINE/MIR	(68)	162	8	3754316
918	17.6	1.7	0.0	chr7	134141257	134141432	(25204541)	C	MER5A	DNA/hAT-Charlie	(10)	179	1	3757026
2312	12.6	3.9	0.3	chr7	135162419	135162769	(24183204)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3758529
536	27.2	14.6	1.5	chr7	135162892	135163223	(24182750)	+	L1ME4a	LINE/L1	5505	5887	(237)	3758530
14	26.9	3.0	2.9	chr7	135211522	135211587	(24134386)	+	G-rich	Low_complexity	1	68	(0)	3758573
12	16.7	5.9	0.0	chr7	135797234	135797267	(23548706)	+	(AAGCA)n	Simple_repeat	1	36	(0)	3759606
765	32.6	5.7	4.1	chr7	136092076	136092727	(23253246)	+	L1MEd	LINE/L1	313	975	(6111)	3760129
1928	10.2	0.3	10.6	chr7	136092729	136093088	(23252885)	+	THE1A	LTR/ERVL-MaLR	1	323	(32)	3760130
291	23.5	10.9	7.8	chr7	136228239	136228496	(23117477)	C	MLT1H	LTR/ERVL-MaLR	(54)	495	229	3760321
823	29.2	2.8	0.9	chr7	136228525	136228842	(23117131)	C	Charlie15b	DNA/hAT-Charlie	(731)	330	7	3760320
2535	7.0	0.0	0.0	chr7	136295435	136295736	(23050237)	C	AluY	SINE/Alu	(8)	303	2	3760428
969	25.6	10.1	5.6	chr7	136295759	136296185	(23049788)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	42	3760429
2343	8.8	0.3	0.0	chr7	139339886	139340182	(20005791)	C	AluSp	SINE/Alu	(15)	298	1	3765382
256	23.1	10.0	0.0	chr7	141551677	141551784	(17794189)	+	MIR3	SINE/MIR	27	146	(62)	3769473
4547	6.6	0.0	0.3	chr7	141926715	141927293	(17418680)	C	L1PA5	LINE/L1	(2)	6152	5576	3769983
426	33.7	3.5	0.0	chr7	141927301	141927466	(17418507)	C	L2a	LINE/L2	(527)	2892	2721	3769981
303	34.2	4.8	0.0	chr7	141927726	141927845	(17418128)	C	MIRc	SINE/MIR	(111)	157	32	3769984
1866	20.7	1.0	2.5	chr7	142700806	142701196	(16644777)	+	MER74A	LTR/ERVL	24	408	(150)	3770916
2512	19.5	5.6	2.6	chr7	142701197	142701780	(16644193)	C	MER73	LTR/ERVL	(0)	644	42	3770917
26	0.0	0.0	0.0	chr7	143345824	143345848	(16000125)	+	(CTGGG)n	Simple_repeat	1	25	(0)	3771797
2239	11.4	1.0	0.0	chr7	146309520	146309826	(13036147)	+	AluSx1	SINE/Alu	1	310	(2)	3775724
35	9.5	4.1	2.6	chr7	146309827	146309883	(13036090)	+	GA-rich	Low_complexity	18	73	(0)	3775725
2038	15.3	11.2	3.5	chr7	148868215	148868608	(10477365)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3779502
1732	16.0	2.2	1.3	chr7	149125674	149125986	(10219987)	C	7SLRNA	srpRNA	(4)	316	1	3780093
16	22.2	3.3	3.2	chr7	149126047	149126118	(10219855)	+	(CCAGGC)n	Simple_repeat	1	72	(0)	3780094
12	21.6	5.6	5.3	chr7	149262051	149262121	(10083852)	+	(GCCGCGG)n	Simple_repeat	1	75	(0)	3780412
14	10.1	6.2	0.0	chr7	149262245	149262276	(10083697)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	3780413
1789	16.0	1.3	0.7	chr7	149695805	149696104	(9649869)	+	AluJo	SINE/Alu	1	302	(10)	3781050
1028	20.4	0.8	13.2	chr7	149696108	149696411	(9649562)	+	MER101	LTR/ERV1	7	272	(202)	3781051
411	14.1	0.0	1.6	chr7	149696411	149696474	(9649499)	+	AluJo	SINE/Alu	90	152	(160)	3781052
1496	13.9	2.7	1.2	chr7	149696462	149696716	(9649257)	+	MER101	LTR/ERV1	216	474	(0)	3781053
12	20.0	5.3	5.0	chr7	149873609	149873665	(9472308)	+	(CGGCG)n	Simple_repeat	1	60	(0)	3781258
13	28.0	0.0	4.9	chr7	150323401	150323461	(9022512)	+	G-rich	Low_complexity	1	61	(0)	3781882
427	32.1	2.1	1.4	chr7	150323695	150323836	(9022137)	C	MIR	SINE/MIR	(3)	259	117	3781883
13	21.7	0.0	2.6	chr7	150379505	150379543	(8966430)	+	(GGCCGG)n	Simple_repeat	1	39	(0)	3781973
13	25.7	1.5	5.9	chr7	150379630	150379696	(8966277)	+	GA-rich	Low_complexity	1	68	(0)	3781974
95	2.3	0.0	0.0	chr7	150978892	150978981	(8366992)	+	(AC)n	Simple_repeat	1	90	(0)	3782735
985	30.2	16.2	2.0	chr7	151463798	151464438	(7881535)	C	L2c	LINE/L2	(729)	2690	1942	3783488
19	14.8	5.4	3.4	chr7	151519191	151519246	(7826727)	+	(CCCG)n	Simple_repeat	1	59	(0)	3783576
18	29.5	0.0	5.5	chr7	151519551	151519641	(7826332)	+	(GCGGCG)n	Simple_repeat	1	91	(0)	3783577
13	9.3	0.0	0.0	chr7	151519644	151519666	(7826307)	+	(CTCG)n	Simple_repeat	1	23	(0)	3783578
15	23.4	3.9	5.0	chr7	151631866	151631942	(7714031)	+	(CCCCGGA)n	Simple_repeat	1	80	(0)	3783798
13	18.8	0.0	5.0	chr7	151632021	151632060	(7713913)	+	(GGCCG)n	Simple_repeat	1	40	(0)	3783799
16	13.1	3.4	8.2	chr7	151632244	151632302	(7713671)	+	G-rich	Low_complexity	1	61	(0)	3783800
18	23.4	1.4	5.5	chr7	151632301	151632372	(7713601)	+	(CGC)n	Simple_repeat	1	73	(0)	3783801
22	23.3	4.3	0.0	chr7	151876026	151876095	(7469878)	+	(CTCCC)n	Simple_repeat	1	73	(0)	3784165
259	20.0	1.5	1.5	chr7	152025107	152025172	(7320801)	C	L1M	LINE/L1	(2456)	5426	5361	3784460
1762	15.0	0.7	1.7	chr7	152025174	152025473	(7320500)	C	7SLRNA	srpRNA	(5)	315	19	3784461
16	22.0	5.4	3.9	chr7	152025618	152025691	(7320282)	+	(CGCGG)n	Simple_repeat	1	78	(0)	3784462
23	12.4	3.5	5.0	chr7	152025935	152025992	(7319981)	+	(GCG)n	Simple_repeat	1	60	(0)	3784463
492	21.0	15.4	4.9	chr7	152636357	152636544	(6709429)	+	Charlie2b	DNA/hAT-Charlie	2546	2768	(14)	3785629
12	25.4	0.0	5.8	chr7	152952121	152952172	(6393801)	+	(GCCCC)n	Simple_repeat	1	52	(0)	3786248
2079	26.6	9.1	6.8	chr7	153169548	153170593	(6175380)	C	L1PB4	LINE/L1	(5142)	2007	1145	3786595
474	25.6	0.0	7.2	chr7	153170581	153170719	(6175254)	C	L1M2	LINE/L1	(5785)	1064	936	3786600
8973	14.2	1.5	4.0	chr7	153497884	153499369	(5846604)	+	Tigger1	DNA/TcMar-Tigger	3	1450	(968)	3787005
14	32.0	0.0	0.0	chr7	156892384	156892437	(2453536)	+	(CGGCC)n	Simple_repeat	1	54	(0)	3791498
48	29.4	2.7	4.5	chr7	156892630	156892889	(2453084)	+	G-rich	Low_complexity	1	267	(0)	3791499
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
2348	13.0	4.7	0.7	chr7	158595570	158595980	(749993)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3793409
12	25.5	0.0	6.9	chr7	158829566	158829623	(516350)	+	G-rich	Low_complexity	1	58	(0)	3793757
1516	8.2	1.3	0.0	chr8	357458	357690	(144780946)	+	L1PB1	LINE/L1	5261	5496	(655)	3794742
15	28.4	0.0	2.0	chr8	7354638	7354687	(137783949)	+	(TAA)n	Simple_repeat	1	50	(0)	3803326
2164	13.0	1.0	1.0	chr8	8491774	8492081	(136646555)	+	AluSz	SINE/Alu	5	312	(0)	3804813
1056	27.8	10.7	5.2	chr8	8492123	8492639	(136645997)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	3804814
1538	12.2	9.8	23.6	chr8	9576249	9576753	(135561883)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3806752
17	17.0	4.1	9.9	chr8	9576818	9576914	(135561722)	+	A-rich	Low_complexity	1	101	(0)	3806753
1043	25.4	14.8	7.1	chr8	17873090	17873584	(127265052)	+	MLT1H	LTR/ERVL-MaLR	10	549	(0)	3818866
2417	11.7	1.1	0.3	chr8	18995582	18995942	(126142694)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3820477
673	15.0	5.6	3.8	chr8	18995943	18996073	(126142563)	+	MER5A1	DNA/hAT-Charlie	33	163	(3)	3820476
2279	11.4	0.0	0.0	chr8	20793928	20794234	(124344402)	+	AluSx1	SINE/Alu	2	308	(4)	3823417
292	26.6	4.8	5.4	chr8	20794339	20794485	(124344151)	C	MLT1H	LTR/ERVL-MaLR	(195)	354	209	3823418
19	23.6	3.0	1.5	chr8	22999749	22999814	(122138822)	+	(CCGCGCC)n	Simple_repeat	1	68	(0)	3827191
14	30.4	0.0	1.7	chr8	23000159	23000216	(122138420)	+	(CGCCCCG)n	Simple_repeat	1	58	(0)	3827192
11	24.9	0.0	2.5	chr8	23246999	23247038	(121891598)	+	(GGCGCG)n	Simple_repeat	1	40	(0)	3827599
183	29.4	5.2	1.1	chr8	23247039	23247131	(121891505)	+	L2b	LINE/L2	3263	3359	(16)	3827600
1049	28.0	8.2	6.6	chr8	23635712	23636759	(121501877)	+	L1ME3Cz	LINE/L1	21	445	(552)	3828285
1088	23.2	8.5	2.5	chr8	23636939	23637304	(121501332)	C	MLT1H	LTR/ERVL-MaLR	(178)	401	1	3828286
717	17.9	0.0	3.0	chr8	26055009	26055142	(119083494)	+	FLAM_C	SINE/Alu	1	130	(13)	3831989
263	29.6	14.4	4.0	chr8	26055162	26055763	(119082873)	C	L1ME4a	LINE/L1	(1681)	4465	3785	3831985
2317	11.0	2.8	0.6	chr8	26158406	26158752	(118979884)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3832204
10559	10.4	0.6	1.2	chr8	26158753	26160183	(118978453)	C	THE1A-int	LTR/ERVL-MaLR	(158)	1422	1	3832204
17	24.8	5.2	3.9	chr8	28385829	28385925	(116752711)	+	(CCCGCCAC)n	Simple_repeat	1	102	(0)	3836024
11	25.1	0.0	4.3	chr8	28494136	28494181	(116644455)	+	(GCGTGC)n	Simple_repeat	1	46	(0)	3836284
16	16.4	0.0	0.0	chr8	28701422	28701455	(116437181)	+	(CGCGCC)n	Simple_repeat	1	34	(0)	3836721
18	0.0	0.0	0.0	chr8	28701618	28701640	(116436996)	+	(GGC)n	Simple_repeat	1	23	(0)	3836722
1661	18.4	2.3	0.7	chr8	29971510	29971803	(115166833)	+	AluJr	SINE/Alu	1	299	(13)	3838787
640	22.6	9.0	6.6	chr8	29971804	29972142	(115166494)	+	MLT1H	LTR/ERVL-MaLR	95	624	(0)	3838786
238	16.0	5.7	0.0	chr8	29972178	29972227	(115166409)	+	MLT1B	LTR/ERVL-MaLR	3	55	(335)	3838788
2983	12.6	3.3	2.5	chr8	29972228	29972339	(115166297)	+	MER31A	LTR/ERV1	1	114	(371)	3838789
27	0.0	3.5	0.0	chr8	30384746	30384774	(114753862)	+	(CTTC)n	Simple_repeat	1	30	(0)	3839685
13	15.9	5.7	0.0	chr8	30385041	30385075	(114753561)	+	(GCCCA)n	Simple_repeat	1	37	(0)	3839686
1734	10.8	7.5	10.3	chr8	30671817	30672132	(114466504)	C	THE1D	LTR/ERVL-MaLR	(68)	313	1	3840164
1050	16.6	0.0	0.0	chr8	30672142	30672304	(114466332)	C	AluJr	SINE/Alu	(13)	299	137	3840166
3237	18.9	3.4	3.7	chr8	30672305	30672542	(114466094)	+	ERVL-B4-int	LTR/ERVL	4990	5227	(487)	3840167
450	12.3	7.6	0.0	chr8	33735145	33735217	(111403419)	C	MADE1	DNA/TcMar-Mariner	(1)	79	1	3845147
267	30.1	2.8	0.0	chr8	37360024	37360126	(107778510)	+	MIR3	SINE/MIR	48	153	(55)	3850196
18	22.2	6.7	1.2	chr8	37796835	37796922	(107341714)	+	(CGGCAG)n	Simple_repeat	1	92	(0)	3850992
13	23.8	4.3	4.2	chr8	37797018	37797086	(107341550)	+	(CCGCG)n	Simple_repeat	1	72	(0)	3850993
1898	15.1	12.1	1.1	chr8	37987403	37987776	(107150860)	C	MSTA	LTR/ERVL-MaLR	(7)	421	1	3851371
2110	13.2	0.0	0.0	chr8	37987807	37988116	(107150520)	+	AluSx1	SINE/Alu	1	310	(2)	3851372
1989	15.5	1.9	1.0	chr8	38021184	38021492	(107117144)	C	AluJb	SINE/Alu	(0)	312	1	3851459
1460	13.8	1.2	5.2	chr8	42391246	42391514	(102747122)	+	AluJo	SINE/Alu	1	258	(54)	3858711
18	16.4	5.2	3.3	chr8	43056172	43056229	(102082407)	+	(CGCAGCC)n	Simple_repeat	1	61	(0)	3860029
1564	22.0	2.8	2.5	chr8	48301113	48301471	(96837165)	+	MLT1A	LTR/ERVL-MaLR	4	363	(11)	3863182
1240	26.8	7.5	3.6	chr8	48301473	48301944	(96836692)	C	MLT1H	LTR/ERVL-MaLR	(46)	503	12	3863183
490	35.8	10.8	1.2	chr8	49366397	49366738	(95771898)	+	L2a	LINE/L2	2557	2935	(484)	3864355
719	28.1	12.2	0.9	chr8	49366776	49367239	(95771397)	C	MLT1H	LTR/ERVL-MaLR	(27)	522	1	3864356
17	11.3	2.3	6.7	chr8	56993419	56993462	(88145174)	+	(GCC)n	Simple_repeat	1	45	(0)	3874702
23	10.0	2.1	4.2	chr8	56993637	56993683	(88144953)	+	(CCG)n	Simple_repeat	1	48	(0)	3874703
19	3.0	5.6	2.6	chr8	56993906	56993941	(88144695)	+	(GGGCGA)n	Simple_repeat	1	38	(0)	3874704
20	20.9	1.2	7.2	chr8	56993942	56993985	(88144651)	+	G-rich	Low_complexity	3	83	(0)	3874705
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
322	30.1	13.2	3.4	chr8	57346813	57347104	(87791532)	+	L3	LINE/CR1	3758	4082	(17)	3875158
407	29.6	8.0	6.4	chr8	57558597	57559171	(87579465)	C	L1MEf	LINE/L1	(5291)	1109	525	3875485
921	20.1	8.2	0.0	chr8	57559225	57559438	(87579198)	+	MER31B	LTR/ERV1	1	233	(233)	3875487
19	24.0	0.0	0.0	chr8	57995111	57995160	(87143476)	+	(GGCCGG)n	Simple_repeat	1	50	(0)	3876031
15	12.2	0.0	0.0	chr8	58659589	58659615	(86479021)	+	(GCT)n	Simple_repeat	1	27	(0)	3876891
26	24.4	1.1	3.4	chr8	59119194	59119280	(86019356)	+	(GCC)n	Simple_repeat	1	88	(0)	3877490
17	24.2	0.0	3.5	chr8	59119307	59119363	(86019273)	+	(CCCCGCC)n	Simple_repeat	1	57	(0)	3877491
15	13.9	0.0	0.0	chr8	59119453	59119476	(86019160)	+	(G)n	Simple_repeat	1	24	(0)	3877492
2052	13.4	6.0	1.6	chr8	60525112	60525475	(84613161)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3879310
13	17.4	0.0	2.9	chr8	61714075	61714108	(83424528)	+	(CCGC)n	Simple_repeat	1	34	(0)	3880998
22	23.3	1.6	1.6	chr8	61714285	61714347	(83424289)	+	(GCT)n	Simple_repeat	1	64	(0)	3880999
13	15.2	0.0	3.2	chr8	61714631	61714661	(83423975)	+	(GCCCC)n	Simple_repeat	1	31	(0)	3881000
1954	15.5	3.7	1.1	chr8	61762176	61762546	(83376090)	C	MER6A	DNA/TcMar-Tigger	(3)	602	222	3881084
238	17.9	2.0	0.0	chr8	61762533	61762586	(83376050)	C	MER6A	DNA/TcMar-Tigger	(557)	48	1	3881084
381	25.1	9.7	7.1	chr8	61762628	61762837	(83375799)	+	MIR	SINE/MIR	5	220	(42)	3881085
13	29.6	1.5	3.0	chr8	63038959	63039023	(82099613)	+	(GCCCGC)n	Simple_repeat	1	66	(0)	3882621
17	18.6	0.0	0.0	chr8	63038992	63039028	(82099608)	+	(CCCCGA)n	Simple_repeat	1	37	(0)	3882622
13	24.7	0.0	0.0	chr8	63085735	63085772	(82052864)	+	G-rich	Low_complexity	1	38	(0)	3882685
2127	11.1	6.1	1.7	chr8	65486691	65487048	(79651588)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3885845
681	23.1	0.7	0.7	chr8	65487049	65487150	(79651486)	+	MIR	SINE/MIR	51	151	(111)	3885844
36386	10.6	4.3	3.4	chr8	68889173	68895123	(76243513)	+	HERVK9-int	LTR/ERVK	18	6021	(0)	3891274
3873	6.6	1.6	0.0	chr8	68895128	68895627	(76243009)	+	MER9a3	LTR/ERVK	5	512	(0)	3891274
21	18.8	0.0	0.0	chr8	72537121	72537163	(72601473)	+	GA-rich	Low_complexity	1	43	(0)	3896585
29	0.0	3.2	0.0	chr8	72537354	72537384	(72601252)	+	(CCGCCCT)n	Simple_repeat	1	32	(0)	3896586
647	26.0	11.5	5.3	chr8	79346970	79347201	(65791435)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	229	3905856
813	24.6	6.9	0.0	chr8	79347202	79347404	(65791232)	C	MER20	DNA/hAT-Charlie	(0)	219	2	3905857
647	31.1	4.6	9.1	chr8	79347405	79347624	(65791012)	C	MLT1H	LTR/ERVL-MaLR	(321)	228	6	3905856
17	18.6	0.0	0.0	chr8	80171178	80171215	(64967421)	+	(CTCACA)n	Simple_repeat	1	38	(0)	3907147
27	15.9	1.7	1.7	chr8	80171332	80171405	(64967231)	+	(AGCCCA)n	Simple_repeat	1	74	(0)	3907148
845	31.0	2.1	4.4	chr8	80718363	80718700	(64419936)	+	MLT1H	LTR/ERVL-MaLR	32	361	(188)	3908276
1609	24.1	7.1	3.2	chr8	81016648	81017174	(64121462)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	3908716
24	21.8	4.4	3.2	chr8	81112145	81112234	(64026402)	+	G-rich	Low_complexity	1	94	(0)	3908830
10623	12.6	1.8	0.9	chr8	84312322	84313937	(60824699)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	3912995
549	28.1	10.9	0.0	chr8	85392075	85392245	(59746391)	C	MIR	SINE/MIR	(42)	220	29	3914514
4592	9.3	0.1	1.5	chr8	85660229	85660904	(59477732)	C	L1P1	LINE/L1	(2973)	3173	2507	3914927
13	19.0	0.0	5.0	chr8	92102807	92102846	(53035790)	+	(GCCC)n	Simple_repeat	1	40	(0)	3923412
16	10.5	3.2	0.0	chr8	92103158	92103188	(53035448)	+	(CTCC)n	Simple_repeat	1	32	(0)	3923413
18	29.3	0.0	0.0	chr8	94949388	94949445	(50189191)	+	(GCCGC)n	Simple_repeat	1	58	(0)	3927879
573	29.0	6.8	1.4	chr8	96841284	96841493	(48297143)	+	Tigger19a	DNA/TcMar-Tigger	30	251	(72)	3930887
923	25.7	5.8	7.3	chr8	97508387	97508853	(47629783)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	3931823
14	19.1	0.0	6.4	chr8	97644083	97644129	(47494507)	+	(GCCCC)n	Simple_repeat	1	47	(0)	3932076
14	16.9	3.0	0.0	chr8	97644686	97644718	(47493918)	+	(GCT)n	Simple_repeat	1	34	(0)	3932077
517	29.5	2.9	2.0	chr8	97822186	97822389	(47316247)	C	L1MEb	LINE/L1	(5855)	215	10	3932528
14	14.2	3.2	0.0	chr8	98825451	98825481	(46313155)	+	(GCC)n	Simple_repeat	1	32	(0)	3934227
1866	24.4	4.5	2.8	chr8	100580357	100580857	(44557779)	+	MLT1J	LTR/ERVL-MaLR	3	512	(0)	3937027
271	30.4	8.0	3.4	chr8	100847811	100847929	(44290707)	+	L2c	LINE/L2	3254	3378	(9)	3937648
2309	8.8	0.7	0.3	chr8	100848008	100848302	(44290334)	+	AluSx1	SINE/Alu	1	296	(16)	3937649
1705	21.4	10.3	3.1	chr8	101246744	101246951	(43891685)	+	MLT1D	LTR/ERVL-MaLR	278	505	(0)	3938405
358	31.5	0.0	1.8	chr8	101246962	101247074	(43891562)	C	MER68B	LTR/ERVL	(451)	113	3	3938404
633	24.4	11.3	0.0	chr8	101247115	101247294	(43891342)	+	MLT1H	LTR/ERVL-MaLR	347	549	(0)	3938407
13	9.7	0.0	0.0	chr8	102411516	102411537	(42727099)	+	(TAA)n	Simple_repeat	1	22	(0)	3940260
14	23.2	3.9	1.9	chr8	102411542	102411593	(42727043)	+	(CTCC)n	Simple_repeat	1	54	(0)	3940261
14	13.7	3.1	0.0	chr8	102654081	102654112	(42484524)	+	G-rich	Low_complexity	1	33	(0)	3940823
11	24.1	0.0	0.0	chr8	102654453	102654486	(42484150)	+	(CGCCCC)n	Simple_repeat	1	34	(0)	3940824
20	28.3	3.6	1.2	chr8	106270272	106270354	(38868282)	+	(CGC)n	Simple_repeat	1	86	(0)	3946268
13	27.0	3.8	0.0	chr8	106270443	106270495	(38868141)	+	(GCGCCTG)n	Simple_repeat	1	55	(0)	3946269
2048	11.8	8.4	1.4	chr8	108115749	108116102	(37022534)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3948872
304	30.7	8.0	0.7	chr8	119645085	119645235	(25493401)	C	MIRc	SINE/MIR	(104)	164	2	3965115
4906	24.4	10.5	1.6	chr8	119711134	119711903	(25426733)	C	L1MB8	LINE/L1	(1773)	5233	4427	3965239
1791	10.4	0.0	0.8	chr8	119711904	119712145	(25426491)	C	7SK	RNA	(91)	240	1	3965242
470	14.9	15.6	2.1	chr8	119712146	119712216	(25426420)	C	L1MB8	LINE/L1	(2562)	4444	4360	3965239
43	2.3	0.0	2.2	chr8	119712217	119712262	(25426374)	+	(TG)n	Simple_repeat	1	46	(0)	3965243
2320	9.6	0.7	1.9	chr8	120590671	120590984	(24547652)	C	AluSg	SINE/Alu	(0)	310	1	3966837
1472	25.7	4.4	2.4	chr8	121117079	121117504	(24021132)	+	MER70B	LTR/ERVL	1	435	(143)	3967727
324	20.0	0.0	1.5	chr8	123065374	123065439	(22073197)	+	MLT1I	LTR/ERVL-MaLR	1	65	(346)	3971098
683	22.8	12.8	9.8	chr8	123065447	123065825	(22072811)	+	MLT1H	LTR/ERVL-MaLR	12	403	(146)	3971099
297	34.7	4.7	2.4	chr8	123065914	123065962	(22072674)	+	MLT1I	LTR/ERVL-MaLR	59	111	(300)	3971098
3236	18.6	1.9	1.1	chr8	123065963	123066602	(22072034)	C	LTR9D	LTR/ERV1	(0)	645	1	3971100
38	17.2	4.8	2.7	chr8	123160412	123160516	(21978120)	+	GA-rich	Low_complexity	1	110	(0)	3971287
597	15.1	0.0	2.8	chr8	124093807	124093915	(21044721)	C	L1MA2	LINE/L1	(0)	6304	6199	3973082
2643	11.1	0.6	0.3	chr8	124678374	124678736	(20459900)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3974118
353	24.3	13.7	4.5	chr8	124678752	124678863	(20459773)	C	L2b	LINE/L2	(0)	3375	3252	3974119
431	35.0	5.5	0.5	chr8	124679004	124679210	(20459426)	+	Tigger12A	DNA/TcMar-Tigger	1	218	(601)	3974120
220	28.9	0.0	0.0	chr8	124679224	124679275	(20459361)	C	MIRb	SINE/MIR	(71)	197	146	3974121
804	28.1	4.1	8.2	chr8	126847788	126848117	(18290519)	+	MLT1H	LTR/ERVL-MaLR	232	547	(2)	3978292
306	27.9	14.4	1.3	chr8	127837606	127837761	(17300875)	C	MIR	SINE/MIR	(6)	256	77	3980216
317	33.6	0.0	0.0	chr8	128032861	128032976	(17105660)	C	MLT1H2	LTR/ERVL-MaLR	(321)	168	53	3980649
185	30.8	2.5	0.0	chr8	128210826	128210903	(16927733)	+	L2a	LINE/L2	3021	3100	(326)	3981039
395	35.9	9.1	2.6	chr8	128211072	128211494	(16927142)	C	L2c	LINE/L2	(25)	3362	2910	3981040
369	19.1	0.0	0.0	chr8	128319866	128319933	(16818703)	+	MLT1H	LTR/ERVL-MaLR	284	351	(198)	3981255
1125	24.2	10.8	4.0	chr8	128322665	128323137	(16815499)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	41	3981260
412	22.9	2.5	4.1	chr8	132120460	132120582	(13018054)	+	MLT1J2	LTR/ERVL-MaLR	43	163	(285)	3987951
410	26.0	1.0	1.0	chr8	132120696	132120792	(13017844)	+	MLT1J2	LTR/ERVL-MaLR	334	430	(18)	3987951
14	18.4	4.4	2.1	chr8	133297284	133297328	(11841308)	+	(GCGCCCC)n	Simple_repeat	1	47	(0)	3990150
12	19.4	4.7	2.2	chr8	133297384	133297426	(11841210)	+	G-rich	Low_complexity	1	45	(0)	3990151
17	17.6	4.4	0.0	chr8	133297583	133297627	(11841009)	+	(GTGTGC)n	Simple_repeat	1	47	(0)	3990152
18	13.5	2.2	4.3	chr8	133571802	133571846	(11566790)	+	(CCT)n	Simple_repeat	1	46	(0)	3990738
314	25.4	4.2	15.8	chr8	135300505	135300668	(9837968)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	406	3993787
354	28.4	5.5	0.3	chr8	135300804	135300972	(9837664)	C	MLT1H	LTR/ERVL-MaLR	(324)	165	23	3993787
362	21.5	1.2	0.0	chr8	137568216	137568294	(7570342)	+	MLT1H2	LTR/ERVL-MaLR	75	154	(335)	3997346
656	26.6	20.4	1.3	chr8	138366745	138367153	(6771483)	+	MLT1H	LTR/ERVL-MaLR	4	547	(2)	3998571
1440	15.0	12.4	2.8	chr8	140995524	140995777	(4142859)	+	AluSz6	SINE/Alu	1	282	(30)	4002954
26	0.0	6.2	0.0	chr8	140995778	140995809	(4142827)	+	(AAAAT)n	Simple_repeat	1	34	(0)	4002955
12041	12.8	3.9	8.6	chr8	140995810	140995935	(4142701)	+	Tigger1	DNA/TcMar-Tigger	533	655	(1763)	4002951
891	15.2	7.6	3.3	chr8	140995936	140996074	(4142562)	+	AluSz6	SINE/Alu	134	291	(21)	4002956
29	0.0	0.0	0.0	chr8	140996075	140996102	(4142534)	+	(AAAAC)n	Simple_repeat	1	28	(0)	4002957
891	15.2	7.6	3.3	chr8	140996103	140996113	(4142523)	+	AluSz6	SINE/Alu	134	291	(21)	4002958
12041	12.8	3.9	8.6	chr8	140996114	140997657	(4140979)	+	Tigger1	DNA/TcMar-Tigger	656	2234	(184)	4002951
222	22.6	1.6	4.6	chr8	142403694	142403758	(2734878)	C	MIRc	SINE/MIR	(118)	150	88	4004861
2573	18.9	2.6	5.5	chr8	143542021	143542109	(1596527)	+	L1MB3	LINE/L1	5523	5615	(568)	4006299
2138	6.2	12.2	0.3	chr8	143542110	143542398	(1596238)	+	7SK	RNA	1	328	(3)	4006300
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
226	12.1	0.0	0.0	chr8	143669745	143669777	(1468859)	+	Alu	SINE/Alu	2	34	(99)	4006490
24	18.1	1.5	4.3	chr8	143840756	143840823	(1297813)	+	(CGCTCC)n	Simple_repeat	1	69	(0)	4006731
12	17.6	3.1	0.0	chr8	143840799	143840830	(1297806)	+	(CCGGCG)n	Simple_repeat	1	33	(0)	4006732
16	18.8	1.9	5.5	chr8	143840975	143841028	(1297608)	+	G-rich	Low_complexity	1	55	(0)	4006733
17	11.8	1.8	8.9	chr8	143946426	143946480	(1192156)	+	G-rich	Low_complexity	1	56	(0)	4006864
15	15.7	0.0	5.1	chr8	143946734	143946772	(1191864)	+	(CCCA)n	Simple_repeat	1	39	(0)	4006865
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
12	9.5	0.0	4.0	chr8	144319318	144319342	(819294)	+	(AACC)n	Simple_repeat	1	25	(0)	4007449
12	19.9	0.0	0.0	chr8	144462245	144462273	(676363)	+	G-rich	Low_complexity	1	29	(0)	4007644
23	9.6	0.0	7.7	chr8	144542566	144542617	(596019)	+	(CTTT)n	Simple_repeat	1	52	(0)	4007719
17	19.6	1.6	6.5	chr8	144542618	144542625	(596011)	+	(CCTT)n	Simple_repeat	2	62	(0)	4007720
2033	12.7	0.0	2.7	chr8	144542657	144542956	(595680)	+	AluSx	SINE/Alu	1	292	(20)	4007721
2153	11.1	2.4	0.0	chr8	144761844	144762131	(376505)	+	AluSg	SINE/Alu	1	295	(15)	4008058
1485	22.2	2.9	8.8	chr8	144762132	144762428	(376208)	C	MER66D	LTR/ERV1	(214)	420	19	4008056
958	26.9	10.2	4.4	chr9	2568695	2569099	(135825618)	+	MLT1H	LTR/ERVL-MaLR	119	549	(0)	4012307
242	34.2	4.8	2.4	chr9	2843147	2843269	(135551448)	+	L2	LINE/L2	2851	2976	(443)	4012732
2920	3.6	0.0	0.0	chr9	2843571	2843877	(135550840)	C	AluY	SINE/Alu	(4)	307	1	4012733
180	28.0	0.0	3.9	chr9	5113332	5113383	(133281334)	+	OldhAT1	DNA/hAT-Ac	1321	1370	(1478)	4016135
23	0.0	0.0	0.0	chr9	5113425	5113449	(133281268)	+	(A)n	Simple_repeat	1	25	(0)	4016136
13005	16.3	4.6	6.6	chr9	5635280	5635609	(132759108)	C	L1MA9	LINE/L1	(1139)	6426	6147	4016818
1775	16.3	4.7	1.9	chr9	5635610	5635979	(132758738)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4016821
13005	13.9	4.6	6.1	chr9	5635980	5636310	(132758407)	C	L1MA9	LINE/L1	(1417)	6148	5797	4016818
12	18.9	7.1	0.0	chr9	6008236	6008277	(132386440)	+	(CTCCCC)n	Simple_repeat	1	45	(0)	4017398
14	23.6	0.0	4.1	chr9	6008355	6008403	(132386314)	+	G-rich	Low_complexity	1	49	(0)	4017399
482	33.6	1.4	5.6	chr9	8926028	8926303	(129468414)	+	L2c	LINE/L2	2916	3185	(202)	4021774
11	21.1	0.0	2.9	chr9	8926340	8926374	(129468343)	+	A-rich	Low_complexity	1	35	(0)	4021777
192	37.4	4.9	4.9	chr9	9636016	9636240	(128758477)	+	L2a	LINE/L2	2933	3157	(218)	4022707
1728	27.1	5.7	2.6	chr9	12981911	12982402	(125412315)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	42	4027006
2117	13.5	3.9	4.1	chr9	13504928	13505289	(124889428)	C	THE1B	LTR/ERVL-MaLR	(3)	361	1	4027734
1563	15.0	2.6	1.1	chr9	13505329	13505588	(124889129)	+	AluJr	SINE/Alu	49	312	(0)	4027735
310	30.4	1.7	2.9	chr9	14847029	14847188	(123547529)	+	LTR16D1	LTR/ERVL	237	391	(260)	4029531
734	27.6	5.1	2.4	chr9	15036744	15036992	(123357725)	+	MIR	SINE/MIR	4	259	(3)	4029813
386	35.9	6.6	0.0	chr9	15036994	15037149	(123357568)	C	MIR3	SINE/MIR	(10)	198	32	4029814
21171	3.9	0.3	0.0	chr9	15037173	15040581	(123354136)	+	L1PA4	LINE/L1	2737	6155	(0)	4029815
559	31.5	2.1	2.1	chr9	16535694	16535933	(121858784)	+	MLT1H2	LTR/ERVL-MaLR	13	252	(237)	4032058
263	24.6	0.0	0.0	chr9	16536055	16536119	(121858598)	+	MLT1H2	LTR/ERVL-MaLR	382	446	(43)	4032058
23	21.8	1.0	8.0	chr9	16727115	16727213	(121667504)	+	(GCGG)n	Simple_repeat	1	100	(0)	4032281
577	29.3	8.2	5.1	chr9	18509534	18509770	(119884947)	C	MLT1H	LTR/ERVL-MaLR	(195)	354	110	4034770
438	22.0	10.9	5.3	chr9	20678313	20678528	(117716189)	+	MLT1H2	LTR/ERVL-MaLR	286	565	(14)	4038248
321	27.6	0.9	6.2	chr9	21516912	21517023	(116877694)	+	MLT1H2	LTR/ERVL-MaLR	81	186	(303)	4039321
390	34.2	0.0	1.4	chr9	23284298	23284445	(115110272)	C	LTR101_Mam	LTR/ERVL	(593)	236	91	4041603
805	26.6	21.0	5.4	chr9	23284473	23284878	(115109839)	C	MLT1H	LTR/ERVL-MaLR	(17)	532	47	4041605
25	25.5	4.2	4.0	chr9	25678153	25678272	(112716445)	+	(CGC)n	Simple_repeat	1	125	(0)	4044678
2145	20.1	4.5	0.8	chr9	25746636	25747086	(112647631)	+	MLT1C	LTR/ERVL-MaLR	1	453	(14)	4044772
1966	15.7	2.2	2.2	chr9	25747139	25747502	(112647215)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4044773
569	31.9	3.4	5.2	chr9	25747503	25748018	(112646699)	C	L1M5	LINE/L1	(1231)	4915	4410	4044770
11	24.4	0.0	0.0	chr9	26878594	26878627	(111516090)	+	(TTCCCC)n	Simple_repeat	1	34	(0)	4046275
860	22.5	0.6	0.0	chr9	26878667	26878826	(111515891)	+	AluJb	SINE/Alu	134	294	(18)	4046276
13904	13.8	1.5	0.7	chr9	27073160	27075279	(111319438)	C	L1PA12	LINE/L1	(4280)	3875	1719	4046601
2126	13.5	4.7	3.3	chr9	27075280	27075638	(111319079)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4046602
13904	19.2	2.0	1.7	chr9	27075639	27076550	(111318167)	C	L1PA12	LINE/L1	(5797)	1744	1	4046601
2355	14.1	1.3	0.5	chr9	33700180	33700557	(104694160)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4055838
1751	22.0	1.3	2.5	chr9	33700629	33701018	(104693699)	+	MER74A	LTR/ERVL	24	408	(150)	4055839
293	10.5	0.0	0.0	chr9	34318164	34318212	(104076505)	+	FLAM_C	SINE/Alu	86	134	(168)	4057223
19	7.2	0.0	0.0	chr9	34318322	34318351	(104076366)	+	(CCAGC)n	Simple_repeat	1	30	(0)	4057224
2171	12.9	1.6	1.9	chr9	36425412	36425721	(101968996)	+	AluSx	SINE/Alu	1	309	(3)	4060606
1504	9.6	0.6	0.0	chr9	36425817	36425994	(101968723)	C	AluSg	SINE/Alu	(131)	179	1	4060607
11	24.4	4.0	1.9	chr9	38069374	38069423	(100325294)	+	(GGCCCGG)n	Simple_repeat	1	52	(0)	4063872
295	15.7	10.3	13.6	chr9	38070030	38070067	(100324650)	C	MIR3	SINE/MIR	(19)	189	147	4063873
2448	5.5	0.0	1.0	chr9	38070068	38070359	(100324358)	+	AluSg7	SINE/Alu	1	289	(20)	4063874
1045	27.6	8.1	13.8	chr9	38208544	38208959	(100185758)	+	MLT1H	LTR/ERVL-MaLR	1	378	(33)	4064154
421	33.0	3.2	4.1	chr9	38209053	38209273	(100185444)	+	L2c	LINE/L2	2911	3129	(258)	4064155
787	14.2	0.5	0.2	chr9	40905014	40915781	(97478936)	+	CER	Satellite	1	10802	(0)	4067935
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
2707	27.2	7.3	5.5	chr9	61855698	61856977	(76537740)	+	SST1	Satellite/centr	263	1561	(2)	4072475
15	5.6	0.0	0.0	chr9	61856982	61857000	(76537717)	+	(TG)n	Simple_repeat	1	19	(0)	4072477
23	25.6	1.7	0.0	chr9	61857000	61857059	(76537658)	+	(TC)n	Simple_repeat	1	61	(0)	4072478
1951	29.4	5.2	6.5	chr9	61857061	61858378	(76536339)	+	SST1	Satellite/centr	262	1562	(1)	4072479
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
16	8.7	0.0	0.0	chr9	68780072	68780096	(69614621)	+	(CGG)n	Simple_repeat	1	25	(0)	4080420
17	13.2	0.0	2.9	chr9	68780223	68780257	(69614460)	+	(CGG)n	Simple_repeat	1	35	(0)	4080421
416	23.8	1.6	8.3	chr9	69261685	69261817	(69132900)	+	MLT1H	LTR/ERVL-MaLR	23	146	(403)	4081327
488	24.4	1.7	0.9	chr9	69261882	69261997	(69132720)	+	MLT1H	LTR/ERVL-MaLR	420	536	(13)	4081327
264	33.0	6.5	5.2	chr9	69262080	69262303	(69132414)	+	L2c	LINE/L2	3049	3277	(110)	4081325
208	35.0	12.3	3.1	chr9	71435504	71435665	(66959052)	C	L3b	LINE/CR1	(11)	5221	5043	4084648
2125	22.2	3.6	3.4	chr9	71435687	71435963	(66958754)	+	MLT1D	LTR/ERVL-MaLR	1	279	(226)	4084649
2546	7.9	0.3	8.5	chr9	71435964	71436283	(66958434)	+	THE1A	LTR/ERVL-MaLR	1	299	(56)	4084650
17	0.0	0.0	0.0	chr9	71768898	71768919	(66625798)	+	(GGGC)n	Simple_repeat	1	22	(0)	4085193
13	13.3	6.1	0.0	chr9	71768975	71769007	(66625710)	+	(GCCCC)n	Simple_repeat	1	35	(0)	4085194
15	5.5	0.0	0.0	chr9	75088934	75088952	(63305765)	+	(AT)n	Simple_repeat	1	19	(0)	4090520
2390	10.6	0.0	0.0	chr9	76799059	76799360	(61595357)	+	AluSq	SINE/Alu	1	302	(11)	4093186
2453	10.3	0.0	0.0	chr9	77996398	77996707	(60398010)	+	AluSg	SINE/Alu	1	310	(0)	4095100
536	30.9	7.1	4.8	chr9	78808424	78808671	(59586046)	+	MIRc	SINE/MIR	6	259	(9)	4096302
26	20.9	1.8	0.0	chr9	79257119	79257174	(59137543)	+	(CT)n	Simple_repeat	1	57	(0)	4096976
1527	22.1	11.9	4.1	chr9	79550629	79551083	(58843634)	+	MLT1H	LTR/ERVL-MaLR	68	569	(0)	4097417
19	7.2	0.0	0.0	chr9	79571362	79571390	(58823327)	+	(CCA)n	Simple_repeat	1	29	(0)	4097445
14	10.8	3.1	3.0	chr9	79571404	79571435	(58823282)	+	(GCA)n	Simple_repeat	1	33	(0)	4097446
13	26.1	2.4	0.0	chr9	79572466	79572507	(58822210)	+	(GCG)n	Simple_repeat	1	43	(0)	4097447
13	19.5	0.0	2.7	chr9	79572840	79572876	(58821841)	+	G-rich	Low_complexity	1	37	(0)	4097448
328	21.7	10.4	0.8	chr9	79771260	79771380	(58623337)	C	MLT1H	LTR/ERVL-MaLR	(16)	533	400	4097727
1955	17.6	0.0	0.3	chr9	79771467	79771779	(58622938)	C	AluSz	SINE/Alu	(0)	312	1	4097728
4960	25.2	7.5	4.9	chr9	79908247	79910061	(58484656)	+	L1MEg	LINE/L1	4312	6145	(1092)	4097909
282	27.8	14.2	3.2	chr9	79910168	79910323	(58484394)	C	LTR33A	LTR/ERVL	(327)	193	18	4097911
1979	12.7	0.4	2.1	chr9	80770073	80770356	(57624361)	+	AluSc8	SINE/Alu	1	279	(32)	4098990
128	1.4	4.1	0.7	chr9	80770357	80770502	(57624215)	+	(TAAAA)n	Simple_repeat	1	152	(0)	4098991
194	32.4	2.6	5.9	chr9	81397812	81397929	(56996788)	+	MIR3	SINE/MIR	12	125	(83)	4099842
16	13.2	0.0	0.0	chr9	81397931	81397955	(56996762)	+	(T)n	Simple_repeat	1	25	(0)	4099843
1720	22.0	3.7	6.6	chr9	85422501	85422942	(52971775)	+	MLT1H	LTR/ERVL-MaLR	1	429	(120)	4106187
581	23.2	9.7	1.8	chr9	85422986	85423156	(52971561)	C	MER58C	DNA/hAT-Charlie	(3)	212	27	4106188
272	23.1	0.0	0.0	chr9	85423166	85423217	(52971500)	+	MLT1H	LTR/ERVL-MaLR	496	547	(2)	4106187
442	27.2	8.6	6.9	chr9	85423218	85423432	(52971285)	+	LTR81B	LTR/Gypsy	31	249	(29)	4106189
14	15.3	0.0	0.0	chr9	85941551	85941579	(52453138)	+	G-rich	Low_complexity	1	29	(0)	4107038
2101	9.1	1.4	0.0	chr9	87726766	87727041	(50667676)	+	AluSx	SINE/Alu	6	285	(27)	4109915
1660	19.6	4.0	1.6	chr9	91930298	91930614	(46464103)	+	LTR10B2	LTR/ERV1	179	503	(0)	4115938
5389	17.1	8.3	1.1	chr9	92689844	92691051	(45703666)	C	L1MCa	LINE/L1	(4700)	2051	708	4117093
267	30.4	4.2	7.2	chr9	93147751	93147973	(45246744)	C	MLT1H	LTR/ERVL-MaLR	(195)	354	139	4117788
10979	12.3	1.5	0.9	chr9	93337690	93339307	(45055410)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	4118015
13	13.2	6.1	0.0	chr9	93566861	93566893	(44827824)	+	(GAGCCC)n	Simple_repeat	1	35	(0)	4118315
16	19.0	0.0	7.3	chr9	95426789	95426843	(42967874)	+	(CCCGG)n	Simple_repeat	1	55	(0)	4121215
589	23.4	13.2	6.5	chr9	96617573	96617819	(41776898)	+	L1ME4b	LINE/L1	624	889	(3)	4123190
16	19.1	0.0	4.3	chr9	100098878	100098923	(38295794)	+	(GGCTG)n	Simple_repeat	1	46	(0)	4129547
342	24.8	2.9	11.6	chr9	100469902	100470063	(37924654)	+	MLT1H	LTR/ERVL-MaLR	421	586	(5)	4130217
215	34.0	11.6	3.8	chr9	100470070	100470221	(37924496)	C	MER5B	DNA/hAT-Charlie	(0)	189	26	4130218
1686	8.9	0.4	0.8	chr9	100581141	100581379	(37813338)	C	7SK	RNA	(93)	238	1	4130420
41	0.0	0.0	0.0	chr9	105096673	105096707	(33298010)	+	(AC)n	Simple_repeat	1	35	(0)	4136880
1704	10.0	0.4	0.4	chr9	105096756	105096985	(33297732)	+	7SK	RNA	1	230	(101)	4136881
17	10.0	0.0	5.6	chr9	105694838	105694873	(32699844)	+	G-rich	Low_complexity	1	36	(0)	4137932
12	25.1	4.3	0.0	chr9	105695159	105695205	(32699512)	+	(CTCG)n	Simple_repeat	1	49	(0)	4137933
1046	28.9	7.2	4.8	chr9	107099390	107100090	(31294627)	+	L2a	LINE/L2	2581	3306	(120)	4140028
15	26.3	5.4	1.3	chr9	107283703	107283776	(31110941)	+	G-rich	Low_complexity	1	78	(0)	4140362
251	13.5	0.0	17.5	chr9	110012977	110013039	(28381678)	C	MLT1H2	LTR/ERVL-MaLR	(0)	549	498	4145504
307	25.4	29.0	6.4	chr9	110013060	110013263	(28381454)	C	MLT1H2	LTR/ERVL-MaLR	(195)	354	105	4145504
760	26.6	12.4	7.1	chr9	110747022	110747539	(27647178)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	4146742
13	27.4	0.0	6.2	chr9	111484194	111484257	(26910460)	+	G-rich	Low_complexity	1	64	(0)	4147933
2115	31.9	10.0	2.5	chr9	112090932	112092341	(26302376)	+	L4_A_Mam	LINE/RTE-X	2962	4560	(430)	4149147
445	33.4	7.8	3.1	chr9	112092359	112092713	(26302004)	+	L4_A_Mam	LINE/RTE-X	4612	4984	(6)	4149147
860	7.0	3.4	0.0	chr9	112169286	112169400	(26225317)	+	HY1	scRNA	1	119	(0)	4149299
16	20.9	0.0	0.0	chr9	112169401	112169433	(26225284)	+	A-rich	Low_complexity	1	33	(0)	4149300
2328	10.2	0.0	0.0	chr9	112169676	112169969	(26224748)	C	AluSp	SINE/Alu	(14)	299	6	4149301
31	11.6	4.3	2.8	chr9	112486782	112486850	(25907867)	+	(CCCCG)n	Simple_repeat	1	72	(0)	4149957
954	13.7	0.0	0.0	chr9	112904684	112904814	(25489903)	+	AluJo	SINE/Alu	1	131	(181)	4150718
15	0.0	0.0	0.0	chr9	112904953	112904969	(25489748)	+	(TC)n	Simple_repeat	1	17	(0)	4150719
299	23.8	34.5	2.4	chr9	113349046	113349217	(25045500)	C	MIR	SINE/MIR	(11)	251	23	4151478
315	26.2	1.2	0.0	chr9	113349250	113349329	(25045388)	+	MIRb	SINE/MIR	172	252	(16)	4151479
189	12.9	3.1	0.0	chr9	113349303	113349333	(25045384)	+	L2c	LINE/L2	3341	3372	(15)	4151472
26	6.6	1.9	5.6	chr9	113349586	113349638	(25045079)	+	(GCCGGG)n	Simple_repeat	1	54	(0)	4151480
30	0.0	0.0	0.0	chr9	113657880	113657905	(24736812)	+	(CA)n	Simple_repeat	1	26	(0)	4152117
11	40.5	1.7	2.5	chr9	113657906	113657968	(24736749)	+	(ATATAC)n	Simple_repeat	2	61	(0)	4152118
1314	27.4	6.6	6.1	chr9	113675632	113676058	(24718659)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	116	4152157
925	26.6	2.6	1.3	chr9	114222729	114222960	(24171757)	+	MIR	SINE/MIR	27	261	(1)	4153204
2510	6.7	0.0	0.3	chr9	120141972	120142268	(18252449)	+	AluY	SINE/Alu	1	296	(15)	4164436
849	27.2	5.2	7.1	chr9	120142269	120142322	(18252395)	+	MLT1H	LTR/ERVL-MaLR	305	353	(196)	4164435
30	4.4	2.0	3.9	chr9	120142341	120142391	(18252326)	+	(AGTCCAACCA)n	Simple_repeat	1	52	(0)	4164437
14	14.7	0.0	3.1	chr9	121651595	121651626	(16743091)	+	GA-rich	Low_complexity	1	32	(0)	4167463
2296	10.5	0.0	0.0	chr9	122806340	122806635	(15588082)	+	AluSx1	SINE/Alu	1	296	(16)	4169573
498	25.9	12.3	4.0	chr9	122806636	122806928	(15587789)	+	MLT1H	LTR/ERVL-MaLR	166	549	(0)	4169572
327	34.2	7.0	3.4	chr9	123967156	123967388	(14427329)	C	L2c	LINE/L2	(5)	3382	3141	4171618
668	27.6	11.6	4.3	chr9	123967397	123967722	(14426995)	C	MLT1H	LTR/ERVL-MaLR	(8)	541	189	4171619
547	23.0	4.4	3.3	chr9	123967855	123968034	(14426683)	+	L1M5	LINE/L1	4504	4685	(1461)	4171620
1690	21.4	6.1	7.2	chr9	126213125	126213557	(12181160)	+	MLT1H	LTR/ERVL-MaLR	12	439	(110)	4176054
837	15.4	1.4	2.9	chr9	126213600	126213739	(12180978)	C	MLT1E3	LTR/ERVL-MaLR	(0)	624	487	4176055
16	27.3	2.9	1.4	chr9	127980516	127980583	(10414134)	+	G-rich	Low_complexity	1	70	(0)	4179450
1477	14.8	3.2	6.9	chr9	128504242	128504532	(9890185)	C	L1MB7	LINE/L1	(395)	5783	5504	4180688
2062	13.3	0.7	0.0	chr9	128648127	128648412	(9746305)	+	AluSz6	SINE/Alu	1	288	(24)	4180974
18	10.4	0.0	0.0	chr9	128648467	128648497	(9746220)	+	(CCAAG)n	Simple_repeat	1	31	(0)	4180975
2038	13.7	0.0	4.4	chr9	128648504	128648824	(9745893)	+	AluSx1	SINE/Alu	1	307	(5)	4180976
15	8.9	0.0	0.0	chr9	128689232	128689255	(9705462)	+	(AGG)n	Simple_repeat	1	24	(0)	4181103
17	9.7	2.9	2.8	chr9	128689312	128689346	(9705371)	+	(GCC)n	Simple_repeat	1	36	(0)	4181104
11	16.9	2.9	2.8	chr9	128689355	128689389	(9705328)	+	(GCCCGG)n	Simple_repeat	1	36	(0)	4181105
21	24.6	1.3	3.9	chr9	128689418	128689494	(9705223)	+	(GCGA)n	Simple_repeat	1	78	(0)	4181106
16	17.8	4.3	2.0	chr9	128689519	128689524	(9705193)	+	(CCCTCC)n	Simple_repeat	1	13	(36)	4181107
13	12.5	0.0	3.5	chr9	128689525	128689553	(9705164)	+	(CCCTT)n	Simple_repeat	1	29	(0)	4181108
16	17.8	4.3	2.0	chr9	128689554	128689565	(9705152)	+	(CCCTCC)n	Simple_repeat	14	49	(0)	4181107
218	27.0	13.0	5.7	chr9	128921894	128921999	(9472718)	C	MIR3	SINE/MIR	(45)	163	49	4181645
211	17.0	0.0	7.8	chr9	128922435	128922485	(9472232)	C	MIR3	SINE/MIR	(55)	153	107	4181646
36	24.4	3.7	4.7	chr9	129028160	129028322	(9366395)	+	(GCCC)n	Simple_repeat	1	169	(0)	4181910
46	27.4	2.1	5.8	chr9	129028328	129028562	(9366155)	+	G-rich	Low_complexity	1	240	(0)	4181911
23	23.4	1.8	7.2	chr9	129488514	129488622	(8906095)	+	(CGCCC)n	Simple_repeat	1	111	(0)	4182952
245	23.7	2.1	0.0	chr9	129488847	129488932	(8905785)	+	MIR3	SINE/MIR	53	147	(121)	4182953
255	22.9	1.6	1.6	chr9	129488970	129489031	(8905686)	C	MIR3	SINE/MIR	(66)	142	81	4182954
43	12.4	7.3	0.0	chr9	131096389	131096484	(7298233)	+	G-rich	Low_complexity	1	103	(0)	4186388
14	24.0	4.5	2.9	chr9	131096693	131096759	(7297958)	+	G-rich	Low_complexity	1	70	(0)	4186389
12	24.4	0.0	4.3	chr9	131096868	131096914	(7297803)	+	(GCGCCGC)n	Simple_repeat	1	47	(0)	4186390
2301	9.1	0.3	0.3	chr9	133385923	133386218	(5008499)	C	AluSz	SINE/Alu	(16)	296	1	4190496
552	32.0	3.1	3.5	chr9	133386219	133386346	(5008371)	C	MIRb	SINE/MIR	(102)	166	34	4190495
359	28.3	0.9	1.7	chr9	134896994	134897108	(3497609)	+	MER5B	DNA/hAT-Charlie	2	115	(63)	4192515
294	21.6	3.8	7.3	chr9	137534742	137534851	(859866)	C	L1ME3	LINE/L1	(83)	6079	5974	4195748
418	20.5	1.2	0.0	chr9	137535028	137535110	(859607)	+	MER58B	DNA/hAT-Charlie	254	337	(4)	4195749
509	20.4	4.8	5.3	chrX	10182259	10182418	(145858477)	C	MLT1H	LTR/ERVL-MaLR	(5)	555	382	4376081
2373	9.5	0.0	0.0	chrX	10182430	10182725	(145858170)	C	AluSx1	SINE/Alu	(16)	296	1	4376082
549	20.0	21.2	6.1	chrX	10376304	10376532	(145664363)	C	MLT1H	LTR/ERVL-MaLR	(16)	533	261	4376401
1686	26.3	4.7	3.6	chrX	11512452	11512952	(144527943)	+	MLT1H	LTR/ERVL-MaLR	43	549	(0)	4378137
2628	10.8	1.3	0.0	chrX	13648321	13648690	(142392205)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4381540
1041	18.8	4.6	0.0	chrX	13734092	13734298	(142306597)	+	MER20	DNA/hAT-Charlie	3	219	(0)	4381668
574	15.9	0.0	0.1	chrX	14279596	14279707	(141761188)	+	L1MA4A	LINE/L1	6188	6280	(23)	4382508
326	26.9	28.5	6.6	chrX	14279726	14280057	(141760838)	C	MLT1H	LTR/ERVL-MaLR	(97)	452	92	4382509
756	29.5	10.4	2.6	chrX	14422423	14422732	(141618163)	C	MLT1H	LTR/ERVL-MaLR	(184)	365	29	4382723
390	31.2	10.1	1.6	chrX	15120517	15120760	(140920135)	+	MLT1H	LTR/ERVL-MaLR	12	278	(271)	4383799
280	21.3	11.4	9.8	chrX	15120759	15120907	(140919988)	+	MLT1H	LTR/ERVL-MaLR	381	531	(18)	4383799
218	21.1	18.4	0.0	chrX	15120917	15120987	(140919908)	+	MIR	SINE/MIR	16	102	(160)	4383800
2323	13.5	8.0	0.8	chrX	16006955	16007349	(140033546)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	4385344
290	23.4	10.7	8.1	chrX	16007350	16007375	(140033520)	C	MLT1G	LTR/ERVL-MaLR	(350)	241	218	4385343
44	2.4	0.0	0.0	chrX	16007542	16007583	(140033312)	+	(TG)n	Simple_repeat	1	42	(0)	4385345
617	26.0	3.8	10.9	chrX	16092315	16092717	(139948178)	+	MLT1H	LTR/ERVL-MaLR	41	549	(0)	4385502
57	0.0	0.0	0.0	chrX	19990923	19990973	(136049922)	+	(CCG)n	Simple_repeat	1	51	(0)	4392338
16	7.4	0.0	6.1	chrX	19991076	19991108	(136049787)	+	(CCGCC)n	Simple_repeat	1	33	(0)	4392339
572	31.5	11.8	4.9	chrX	20465084	20465577	(135575318)	+	MLT1H	LTR/ERVL-MaLR	1	533	(16)	4393217
197	31.8	4.3	1.5	chrX	20515609	20515675	(135525220)	+	L2b	LINE/L2	3300	3368	(7)	4393299
694	24.1	7.5	1.6	chrX	20515817	20516182	(135524713)	C	MLT1H	LTR/ERVL-MaLR	(6)	543	30	4393300
788	29.1	15.9	1.9	chrX	21137381	21137801	(134903094)	+	MLT1H	LTR/ERVL-MaLR	7	497	(52)	4394112
7183	6.8	0.4	0.1	chrX	21137824	21139562	(134901333)	C	L1PA7	LINE/L1	(3)	6151	4410	4394113
1204	23.0	13.3	4.8	chrX	21707509	21708006	(134332889)	+	MLT1H	LTR/ERVL-MaLR	1	547	(2)	4394788
196	28.2	14.3	2.5	chrX	22122501	22122580	(133918315)	+	MIR3	SINE/MIR	61	151	(57)	4395531
1341	25.2	1.4	10.2	chrX	22122654	22122984	(133917911)	C	MLT1H	LTR/ERVL-MaLR	(146)	403	103	4395532
2200	13.6	0.3	0.0	chrX	22122985	22123278	(133917617)	C	AluJb	SINE/Alu	(7)	305	11	4395533
193	17.6	0.0	0.0	chrX	23305029	23305062	(132735833)	C	L2a	LINE/L2	(0)	3426	3393	4397310
948	31.2	1.9	4.7	chrX	23305195	23305580	(132735315)	C	MLT1H	LTR/ERVL-MaLR	(172)	377	3	4397311
11	20.6	5.1	0.0	chrX	24150109	24150147	(131890748)	+	(AGGCCGA)n	Simple_repeat	1	41	(0)	4398943
23	20.0	4.2	2.7	chrX	24150334	24150405	(131890490)	+	(GGC)n	Simple_repeat	1	75	(0)	4398944
1173	21.2	10.7	3.0	chrX	24270973	24271276	(131769619)	C	MLT1C	LTR/ERVL-MaLR	(89)	378	54	4399195
2113	9.3	2.7	17.6	chrX	24271277	24271719	(131769176)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4399196
1921	11.3	16.5	2.7	chrX	30959762	30960126	(125080769)	C	MSTA	LTR/ERVL-MaLR	(0)	428	4	4409059
742	30.4	9.5	5.3	chrX	30960127	30960244	(125080651)	C	LTR16D	LTR/ERVL	(401)	250	134	4409058
2047	15.4	0.0	0.0	chrX	37760283	37760580	(118280315)	+	AluSz6	SINE/Alu	15	312	(0)	4417888
627	28.0	8.0	7.0	chrX	37760657	37760940	(118279955)	+	MLT1H	LTR/ERVL-MaLR	247	533	(16)	4417887
1314	26.0	9.4	2.3	chrX	37871956	37872388	(118168507)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	81	4418082
875	24.0	0.6	0.0	chrX	38042261	38042431	(117998464)	C	MER8	DNA/TcMar-Tigger	(9)	230	59	4418337
299	20.0	1.6	0.0	chrX	39591007	39591066	(116449829)	C	MIR	SINE/MIR	(38)	224	164	4420801
519	27.8	9.4	4.3	chrX	39591068	39591484	(116449411)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	82	4420802
270	24.7	2.7	0.0	chrX	40545047	40545119	(115495776)	C	MamSINE1	SINE/tRNA-RTE	(145)	145	71	4422678
1315	29.0	5.5	0.2	chrX	40545411	40545808	(115495087)	+	LTR16A	LTR/ERVL	32	451	(0)	4422679
372	32.5	9.1	6.1	chrX	42920223	42920468	(113120427)	+	L2a	LINE/L2	2352	2605	(814)	4426635
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
796	26.5	19.9	4.2	chrX	44675312	44675736	(111365159)	+	MLT1H	LTR/ERVL-MaLR	27	534	(15)	4429447
2794	16.9	10.5	1.9	chrX	44684778	44685349	(111355546)	+	MLT1E2	LTR/ERVL-MaLR	1	627	(0)	4429475
1416	20.5	1.2	8.9	chrX	44685350	44685409	(111355486)	+	MER58B	DNA/hAT-Charlie	283	340	(1)	4429471
927	18.8	0.6	0.0	chrX	44685418	44685582	(111355313)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	4429476
203	31.9	11.1	0.7	chrX	46775023	46775167	(109265728)	C	L2c	LINE/L2	(523)	2896	2735	4432717
1369	23.5	7.9	8.1	chrX	46775169	46775626	(109265269)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	91	4432720
13	13.4	6.1	0.0	chrX	49200222	49200254	(106840641)	+	(GGCGC)n	Simple_repeat	1	35	(0)	4437694
235	33.9	4.8	0.2	chrX	54640098	54640214	(101400681)	+	L2c	LINE/L2	3224	3343	(44)	4446205
1876	14.2	0.0	0.3	chrX	56767310	56767647	(99273248)	+	LTR12C	LTR/ERV1	3	339	(1240)	4448516
290	22.9	5.4	9.6	chrX	63618922	63619056	(92421839)	C	MLT1H2	LTR/ERVL-MaLR	(0)	549	421	4450315
354	30.0	2.6	0.0	chrX	63619179	63619309	(92421586)	C	MLT1H2	LTR/ERVL-MaLR	(198)	213	70	4450315
1059	18.1	2.3	1.9	chrX	70909113	70909327	(85131568)	+	AluJr	SINE/Alu	79	294	(18)	4460383
2149	9.6	0.7	0.0	chrX	73902409	73902723	(82138172)	C	AluSp	SINE/Alu	(0)	313	2	4464886
3476	16.1	2.7	5.3	chrX	73902724	73902889	(82138006)	C	L1M2	LINE/L1	(2154)	3989	3825	4464883
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
4172	11.9	0.3	3.4	chrX	74089270	74090212	(81950683)	+	L1M2	LINE/L1	2940	3843	(3365)	4465163
4314	17.2	1.7	0.4	chrX	74090223	74090965	(81949930)	C	MSTA-int	LTR/ERVL-MaLR	(898)	753	1	4465168
742	12.0	0.0	0.0	chrX	74178481	74178588	(81862307)	+	HERVK3-int	LTR/ERVK	586	693	(6144)	4465236
921	17.1	1.2	0.0	chrX	74178921	74179078	(81861817)	+	HERVK3-int	LTR/ERVK	2330	2489	(4348)	4465236
18631	12.8	1.2	3.4	chrX	79871429	79873980	(76166915)	+	L1PA14	LINE/L1	5670	8155	(1)	4471242
2505	26.9	4.5	2.8	chrX	93439175	93440568	(62600327)	+	L1MA4A	LINE/L1	4	1549	(5567)	4485622
751	19.7	1.4	0.0	chrX	106618353	106618489	(49422406)	C	MER5A	DNA/hAT-Charlie	(50)	139	1	4502941
1378	15.9	3.3	11.3	chrX	106618494	106618820	(49422075)	+	AluJb	SINE/Alu	2	301	(11)	4502942
463	26.0	11.5	0.8	chrX	106618821	106619118	(49421777)	C	L1MEi	LINE/L1	(3839)	2376	1975	4502935
498	25.1	7.4	7.9	chrX	107641985	107642187	(48398708)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	346	4504540
14	19.7	2.3	2.3	chrX	111681582	111681624	(44359271)	+	(CTCCGC)n	Simple_repeat	1	44	(0)	4510263
338	23.7	1.3	5.0	chrX	115410032	115410111	(40630784)	C	MamTip2	DNA/hAT-Tip100	(11)	294	218	4515458
25	12.9	2.3	0.0	chrX	115410130	115410172	(40630723)	+	(TG)n	Simple_repeat	1	44	(0)	4515459
20	26.0	4.6	0.0	chrX	115410172	115410236	(40630659)	+	GA-rich	Low_complexity	1	68	(0)	4515460
5140	15.0	2.0	1.9	chrX	119549886	119550659	(36490236)	+	L1M4	LINE/L1	4018	5087	(1059)	4521300
1893	15.5	0.7	2.0	chrX	119550660	119550962	(36489933)	C	AluSz6	SINE/Alu	(13)	299	1	4521302
668	30.8	8.3	3.5	chrX	120488241	120488554	(35552341)	C	ERV3-16A3_LTR	LTR/ERVL	(1)	421	91	4523027
2346	9.7	0.7	0.0	chrX	120488555	120488854	(35552041)	C	AluSx4	SINE/Alu	(8)	302	1	4523028
332	31.5	5.2	3.8	chrX	123177456	123177587	(32863308)	C	MER94	DNA/hAT-Blackjack	(0)	134	1	4526376
1033	25.5	15.5	4.9	chrX	123177631	123178116	(32862779)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	3	4526377
38	0.0	0.0	0.0	chrX	123765232	123765266	(32275629)	+	(CCG)n	Simple_repeat	1	35	(0)	4527273
20	31.6	0.0	0.0	chrX	125204106	125204167	(30836728)	+	(TG)n	Simple_repeat	1	62	(0)	4529799
29	12.6	4.8	1.5	chrX	125204472	125204534	(30836361)	+	GA-rich	Low_complexity	1	66	(0)	4529800
441	29.0	0.0	0.0	chrX	129150178	129150284	(26890611)	C	MLT1H2	LTR/ERVL-MaLR	(303)	186	80	4534311
567	30.1	8.4	5.5	chrX	129612434	129612884	(26428011)	+	L2a	LINE/L2	2888	3333	(93)	4534966
260	26.2	3.0	1.5	chrX	129905705	129905770	(26135125)	+	L2a	LINE/L2	3340	3406	(20)	4535554
19	25.4	0.0	3.1	chrX	130340011	130340074	(25700821)	+	(GCCGG)n	Simple_repeat	1	64	(0)	4536394
310	31.3	2.2	3.0	chrX	134598962	134599096	(21441799)	+	MIR3	SINE/MIR	34	167	(41)	4543015
2705	11.0	0.3	0.3	chrX	134599235	134599609	(21441286)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4543016
1272	24.5	10.4	3.1	chrX	134760683	134761116	(21279779)	+	MLT1H	LTR/ERVL-MaLR	10	456	(33)	4543323
17	31.5	1.3	1.3	chrX	135422100	135422175	(20618720)	+	(CGGCGG)n	Simple_repeat	1	77	(0)	4544315
635	20.9	2.5	3.1	chrX	136924953	136925066	(19115829)	C	L1ME2z	LINE/L1	(53)	6391	6280	4546889
881	16.1	11.1	0.5	chrX	136925071	136925263	(19115632)	C	HAL1M8	LINE/L1	(154)	2837	2622	4546891
860	20.0	7.2	1.5	chrX	136925271	136925468	(19115427)	C	LTR41	LTR/ERVL	(558)	210	1	4546892
1389	23.5	4.5	2.8	chrX	136925502	136925895	(19115000)	C	L1MEc	LINE/L1	(5995)	405	5	4546893
2083	13.8	0.0	2.4	chrX	140101187	140101484	(15939411)	+	AluJb	SINE/Alu	11	301	(11)	4551716
24	19.4	4.5	4.3	chrX	151397071	151397159	(4643736)	+	(GCGCC)n	Simple_repeat	1	93	(0)	4567572
217	26.3	1.7	0.0	chrX	153763976	153764032	(2276863)	+	L2b	LINE/L2	3311	3368	(7)	4570722
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
262	25.0	0.0	0.0	chrY	11000083	11000138	(46227277)	C	AluYj4	SINE/Alu	(32)	279	224	4588639
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
471	23.6	1.6	5.4	chrY	11281810	11281939	(45945476)	C	MER21C	LTR/ERVL	(645)	223	99	4589057