17	10.8	0.0	0.0	chr1	1080049	1080078	(247876344)	+	(CCCCG)n	Simple_repeat	1	30	(0)	1337
17	13.0	2.9	0.0	chr1	1273795	1273828	(247682594)	+	(CCG)n	Simple_repeat	1	35	(0)	1543
12	15.7	2.6	5.0	chr1	1273983	1274021	(247682401)	+	G-rich	Low_complexity	1	40	(0)	1544
68	18.5	2.5	5.3	chr1	1315661	1315863	(247640559)	+	GA-rich	Low_complexity	1	208	(0)	1579
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
12	21.1	0.0	4.8	chr1	1920053	1920094	(247036328)	+	G-rich	Low_complexity	1	42	(0)	2618
2224	11.7	0.3	1.0	chr1	2189048	2189355	(246767067)	+	AluJo	SINE/Alu	1	306	(6)	2978
13	21.0	3.2	6.2	chr1	2195398	2195459	(246760963)	+	(CTGGCCC)n	Simple_repeat	1	64	(0)	2984
21	24.3	0.0	4.1	chr1	2279575	2279647	(246676775)	+	G-rich	Low_complexity	1	73	(0)	3086
12	18.4	0.0	3.0	chr1	3471528	3471560	(245484862)	+	G-rich	Low_complexity	1	33	(0)	4027
283	23.2	4.1	0.0	chr1	5832083	5832177	(243124245)	+	MER21C	LTR/ERVL	2	99	(769)	7341
61	13.4	0.0	0.0	chr1	5832249	5832348	(243124074)	+	(GCTGGGG)n	Simple_repeat	1	100	(0)	7342
1439	19.9	5.4	2.4	chr1	5847666	5847803	(243108619)	+	MLT1A0	LTR/ERVL-MaLR	15	156	(209)	7364
13	4.8	0.0	4.2	chr1	5902164	5902187	(243054235)	+	(CTAA)n	Simple_repeat	1	24	(0)	7412
322	24.8	3.1	1.4	chr1	6161946	6162055	(242794367)	+	MIRc	SINE/MIR	39	151	(117)	7757
2345	10.7	0.3	1.6	chr1	6162100	6162416	(242794006)	+	AluSp	SINE/Alu	1	313	(0)	7758
12	13.8	11.9	3.0	chr1	6199328	6199386	(242757036)	+	G-rich	Low_complexity	1	66	(0)	7812
2092	6.2	7.4	0.0	chr1	6205477	6205750	(242750672)	C	AluSz	SINE/Alu	(16)	296	1	7832
228	17.0	0.0	4.1	chr1	6208675	6208723	(242747699)	+	MIRc	SINE/MIR	106	152	(116)	7836
59	17.4	2.7	3.3	chr1	6244934	6245081	(242711341)	+	(CCCTC)n	Simple_repeat	1	152	(0)	7899
28	21.9	0.0	3.8	chr1	6554193	6554272	(242402150)	+	G-rich	Low_complexity	1	80	(0)	8454
18	18.6	0.0	7.1	chr1	6613790	6613845	(242342577)	+	(CCG)n	Simple_repeat	1	56	(0)	8544
353	25.7	8.4	5.5	chr1	7075272	7075477	(241880945)	C	MER112	DNA/hAT-Charlie	(35)	226	15	9358
2328	11.0	0.0	0.0	chr1	7075663	7075962	(241880460)	C	AluSx	SINE/Alu	(12)	300	1	9359
11	20.1	2.9	0.0	chr1	8873709	8873742	(240082680)	+	G-rich	Low_complexity	1	35	(0)	12435
15	21.8	0.0	5.7	chr1	8878056	8878108	(240078314)	+	(GCGCGG)n	Simple_repeat	1	53	(0)	12446
13	25.2	0.0	2.3	chr1	9687551	9687594	(239268828)	+	G-rich	Low_complexity	1	44	(0)	14179
12	13.8	2.1	8.2	chr1	11356504	11356528	(237599894)	+	(CTTT)n	Simple_repeat	1	24	(0)	17525
2433	7.8	0.0	3.4	chr1	11356529	11356849	(237599573)	C	AluSz	SINE/Alu	(0)	312	3	17526
2218	10.2	1.3	0.0	chr1	11689316	11689609	(237266813)	+	AluSx	SINE/Alu	1	298	(14)	18247
4003	10.1	1.4	4.5	chr1	11689610	11689849	(237266573)	+	MER41A	LTR/ERV1	329	553	(1)	18245
18	9.8	3.0	0.0	chr1	11806284	11806316	(237150106)	+	(CTG)n	Simple_repeat	1	34	(0)	18488
810	8.7	0.0	4.2	chr1	11908152	11908271	(237048151)	+	U5	snRNA	1	115	(1)	18706
2226	10.2	0.3	0.3	chr1	11943951	11944244	(237012178)	+	AluSx1	SINE/Alu	1	294	(18)	18804
371	28.6	21.1	4.2	chr1	11944245	11944290	(237012132)	+	MIR	SINE/MIR	220	262	(0)	18803
37	0.0	0.0	0.0	chr1	11944423	11944454	(237011968)	+	(AC)n	Simple_repeat	1	32	(0)	18805
12	13.7	6.8	4.3	chr1	12166722	12166765	(236789657)	+	(GCAGG)n	Simple_repeat	1	47	(0)	19302
17840	7.4	0.7	0.2	chr1	14287381	14291820	(234664602)	C	L1P2	LINE/L1	(1694)	4625	177	22923
670	30.6	5.2	1.3	chr1	14590724	14590964	(234365458)	C	MIR	SINE/MIR	(10)	252	4	23475
16	21.0	1.4	7.1	chr1	15153699	15153767	(233802655)	+	(CCGCCTC)n	Simple_repeat	1	70	(0)	24655
2682	13.8	2.5	0.2	chr1	15244826	15245247	(233711175)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	24854
15	20.1	2.9	0.0	chr1	15835912	15835945	(233120477)	+	(GC)n	Simple_repeat	1	35	(0)	26170
185	22.4	8.2	1.5	chr1	16026325	16026392	(232930030)	C	L2c	LINE/L2	(48)	3339	3267	26543
250	26.4	13.0	0.0	chr1	16113304	16113390	(232843032)	+	MIRb	SINE/MIR	52	151	(117)	26716
12	23.1	3.7	3.6	chr1	16613393	16613446	(232342976)	+	(CCGCGCC)n	Simple_repeat	1	56	(0)	27819
16	7.0	3.1	3.0	chr1	16613537	16613568	(232342854)	+	(CCTGCG)n	Simple_repeat	1	33	(0)	27820
552	12.9	10.6	1.0	chr1	17434149	17434250	(231522172)	+	MER21B	LTR/ERVL	40	152	(716)	29379
2436	20.1	10.9	1.1	chr1	17434264	17434827	(231521595)	+	MER21B	LTR/ERVL	191	816	(52)	29379
1392	20.8	17.2	1.7	chr1	17759156	17759614	(231196808)	+	LTR41	LTR/ERVL	8	552	(216)	30174
1925	21.2	8.0	4.6	chr1	18090492	18091031	(230865391)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	30911
621	32.2	9.4	6.1	chr1	18255653	18256379	(230700043)	+	L2c	LINE/L2	2525	3285	(102)	31254
272	20.6	1.4	5.6	chr1	18298314	18298385	(230658037)	C	MER39	LTR/ERV1	(634)	73	5	31343
26	0.0	0.0	0.0	chr1	18676491	18676515	(230279907)	+	(GGGGA)n	Simple_repeat	1	25	(0)	32169
2077	14.5	9.4	1.2	chr1	19337397	19337670	(229618752)	+	MER31A	LTR/ERV1	159	447	(38)	33470
13	5.3	0.0	0.0	chr1	19485439	19485458	(229470964)	+	(GGC)n	Simple_repeat	1	20	(0)	33724
1003	30.9	10.8	0.7	chr1	20367209	20367824	(228588598)	+	L2a	LINE/L2	2085	2770	(649)	35613
15	11.5	0.0	3.2	chr1	20552450	20552480	(228403942)	+	(GGGGA)n	Simple_repeat	1	31	(0)	36029
451	27.0	13.4	5.6	chr1	20728153	20728454	(228227968)	C	L2a	LINE/L2	(3)	3423	3095	36434
380	32.0	3.2	0.8	chr1	21648172	21648294	(227308128)	C	MIR3	SINE/MIR	(62)	146	21	38377
1940	8.0	11.8	0.0	chr1	21658942	21659204	(227297218)	C	AluSp	SINE/Alu	(15)	298	1	38409
325	27.5	14.5	3.9	chr1	22416416	22416593	(226539829)	C	MIRc	SINE/MIR	(45)	223	24	40125
213	29.6	0.0	3.6	chr1	22930313	22930396	(226026026)	+	MIRb	SINE/MIR	177	257	(11)	41260
309	24.0	13.8	2.9	chr1	23019090	23019192	(225937230)	+	L2c	LINE/L2	3272	3387	(0)	41474
14	26.9	1.4	5.3	chr1	23019449	23019522	(225936900)	+	(GCGCGGC)n	Simple_repeat	1	75	(0)	41475
413	29.1	5.2	1.6	chr1	23357604	23357732	(225598690)	+	MER135	DNA	23	156	(72)	42224
294	29.5	6.2	11.4	chr1	23555708	23555948	(225400474)	+	MIRb	SINE/MIR	2	232	(36)	42733
228	14.6	2.4	0.0	chr1	23556221	23556261	(225400161)	C	MIR1_Amn	SINE/MIR	(105)	125	84	42734
382	30.4	0.0	0.9	chr1	23556439	23556551	(225399871)	C	MIRb	SINE/MIR	(122)	146	35	42732
14	17.1	1.9	7.4	chr1	23598756	23598808	(225357614)	+	G-rich	Low_complexity	1	54	(0)	42840
2199	8.1	1.7	0.3	chr1	23637189	23637486	(225318936)	C	AluSg7	SINE/Alu	(6)	303	2	42957
396	31.1	1.3	1.3	chr1	23637688	23637837	(225318585)	C	MIRc	SINE/MIR	(65)	203	54	42958
11	21.7	0.0	2.9	chr1	23980380	23980414	(224976008)	+	(CTCCAC)n	Simple_repeat	1	35	(0)	43830
302	16.3	11.3	2.8	chr1	25239653	25239750	(223716672)	C	FRAM	SINE/Alu	(10)	156	79	46682
17	27.8	0.0	0.0	chr1	25246598	25246649	(223709773)	+	G-rich	Low_complexity	1	52	(0)	46694
24525	6.5	0.1	0.8	chr1	25506586	25512707	(223443715)	+	L1PA2	LINE/L1	124	6143	(12)	47279
14	18.9	4.8	0.0	chr1	25859472	25859513	(223096909)	+	(CCGGCC)n	Simple_repeat	1	44	(0)	47960
15	20.0	2.5	0.0	chr1	26170107	26170146	(222786276)	+	(CGACCC)n	Simple_repeat	1	41	(0)	48734
13	21.3	8.6	3.4	chr1	26280474	26280495	(222675927)	+	(CTGACC)n	Simple_repeat	1	34	(54)	48974
16	8.2	0.0	0.0	chr1	26280496	26280521	(222675901)	+	(CCTCC)n	Simple_repeat	1	26	(0)	48975
13	21.3	8.6	3.4	chr1	26280522	26280554	(222675868)	+	(CTGACC)n	Simple_repeat	35	88	(0)	48974
30	3.4	0.0	0.0	chr1	26409287	26409316	(222547106)	+	(CA)n	Simple_repeat	1	30	(0)	49286
11	23.8	6.1	0.0	chr1	26410210	26410258	(222546164)	+	G-rich	Low_complexity	1	52	(0)	49287
46	0.0	0.0	0.0	chr1	26410378	26410416	(222546006)	+	(GT)n	Simple_repeat	1	39	(0)	49288
12	18.3	0.0	7.0	chr1	26960367	26960409	(221996013)	+	(CCCCCT)n	Simple_repeat	1	43	(0)	50561
2084	7.0	1.8	0.7	chr1	27031144	27031265	(221925157)	C	AluSc	SINE/Alu	(177)	132	6	50746
535	22.2	1.5	3.6	chr1	27031310	27031449	(221924973)	C	MER5A1	DNA/hAT-Charlie	(4)	162	26	50748
251	35.2	9.3	5.1	chr1	27141453	27141709	(221814713)	+	L2c	LINE/L2	3096	3364	(23)	51027
384	20.8	12.2	5.6	chr1	27350194	27350300	(221606122)	+	MIRb	SINE/MIR	119	233	(35)	51563
14	10.3	0.0	8.1	chr1	27570873	27570909	(221385513)	+	(GCCCCT)n	Simple_repeat	1	37	(0)	52045
13	0.0	0.0	0.0	chr1	27575174	27575190	(221381232)	+	(CCG)n	Simple_repeat	1	17	(0)	52049
15	24.9	0.0	2.0	chr1	27607474	27607522	(221348900)	+	G-rich	Low_complexity	1	49	(0)	52110
248	35.6	4.9	5.4	chr1	27915036	27915240	(221041182)	C	L3	LINE/CR1	(198)	3901	3698	52826
41	15.7	0.0	2.4	chr1	28260101	28260183	(220696239)	+	(CCCCTC)n	Simple_repeat	1	83	(0)	53685
1314	14.9	12.9	0.0	chr1	28510357	28510605	(220445817)	+	AluSc	SINE/Alu	2	287	(22)	54383
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
59	0.0	0.0	0.0	chr1	28885033	28885082	(220071340)	+	(AC)n	Simple_repeat	1	50	(0)	55402
470	31.4	7.0	2.5	chr1	29235964	29236208	(219720214)	+	L3	LINE/CR1	3786	4042	(57)	56233
337	31.5	12.1	1.6	chr1	29249849	29250292	(219706130)	+	L2b	LINE/L2	2829	3332	(43)	56249
180	26.2	2.3	0.0	chr1	29472091	29472132	(219484290)	C	OldhAT1	DNA/hAT-Ac	(2447)	401	359	56673
355	28.5	12.7	1.2	chr1	29975407	29975573	(218980849)	C	L1ME1	LINE/L1	(1)	6178	5990	57617
324	11.7	9.1	0.0	chr1	30708364	30708423	(218247999)	+	L1MA9	LINE/L1	6208	6273	(39)	58886
48	0.0	0.0	0.0	chr1	30858945	30858985	(218097437)	+	(CA)n	Simple_repeat	1	41	(0)	59245
315	30.9	5.3	1.6	chr1	30859109	30859236	(218097186)	C	L2b	LINE/L2	(5)	3370	3238	59246
332	36.7	2.9	2.9	chr1	30911283	30911456	(218044966)	+	L3	LINE/CR1	3916	4089	(10)	59370
496	23.2	22.3	4.1	chr1	31549245	31549608	(217406814)	C	L2a	LINE/L2	(1)	3425	2977	60884
708	29.2	8.2	0.5	chr1	31705574	31705786	(217250636)	C	MIR	SINE/MIR	(30)	232	2	61178
1049	20.2	6.6	2.6	chr1	31723488	31723792	(217232630)	+	MER33	DNA/hAT-Charlie	1	318	(6)	61212
391	28.4	1.7	2.5	chr1	31724024	31724142	(217232280)	C	MIRc	SINE/MIR	(41)	227	110	61213
214	36.5	5.3	0.0	chr1	31752529	31752635	(217203787)	C	L2c	LINE/L2	(212)	3175	3063	61259
229	25.0	3.0	3.0	chr1	31759876	31759941	(217196481)	+	MIRc	SINE/MIR	102	167	(101)	61268
12	19.9	2.3	4.4	chr1	31760579	31760622	(217195800)	+	G-rich	Low_complexity	1	45	(0)	61269
14	20.0	3.0	7.3	chr1	31760665	31760730	(217195692)	+	(CGCC)n	Simple_repeat	1	68	(0)	61270
3193	8.0	0.2	0.2	chr1	31816327	31816779	(217139643)	C	L1PREC2	LINE/L1	(2)	6158	5706	61366
14	19.1	0.0	2.6	chr1	32248485	32248522	(216707900)	+	(GAGCCG)n	Simple_repeat	1	38	(0)	62400
15	11.7	0.0	0.0	chr1	32292241	32292268	(216664154)	+	(GGGCC)n	Simple_repeat	1	28	(0)	62539
14	27.3	1.8	1.8	chr1	32333108	32333162	(216623260)	+	(TTTATA)n	Simple_repeat	1	56	(0)	62644
18	16.6	2.0	3.9	chr1	32361673	32361723	(216594699)	+	G-rich	Low_complexity	1	52	(0)	62708
469	33.6	6.5	1.8	chr1	32759762	32759982	(216196440)	+	MIRc	SINE/MIR	33	264	(4)	63671
15	14.8	2.6	2.5	chr1	32893628	32893666	(216062756)	+	G-rich	Low_complexity	1	40	(0)	63971
12	11.1	0.0	8.6	chr1	32973105	32973139	(215983283)	+	(GCCCCC)n	Simple_repeat	1	35	(0)	64134
12	16.5	0.0	0.0	chr1	32973206	32973232	(215983190)	+	G-rich	Low_complexity	1	27	(0)	64135
12	15.7	2.6	5.0	chr1	33036893	33036931	(215919491)	+	(ACGC)n	Simple_repeat	1	40	(0)	64297
654	23.7	9.4	7.8	chr1	33037181	33037469	(215918953)	+	L1M5	LINE/L1	5514	5802	(360)	64298
14	27.3	0.0	3.6	chr1	33181241	33181328	(215775094)	+	G-rich	Low_complexity	1	84	(0)	64626
17	16.3	3.2	6.2	chr1	34164201	34164262	(214792160)	+	(CTCCACC)n	Simple_repeat	1	64	(0)	66324
239	32.7	4.0	11.7	chr1	34167600	34167897	(214788525)	C	L2b	LINE/L2	(20)	3355	3082	66332
379	33.1	2.5	1.9	chr1	35079020	35079179	(213877243)	C	MIR	SINE/MIR	(87)	175	15	67987
39	32.2	0.0	0.0	chr1	35192740	35192869	(213763553)	+	(GCG)n	Simple_repeat	1	130	(0)	68203
17	27.0	2.9	1.4	chr1	35192969	35193037	(213763385)	+	(CCGCCA)n	Simple_repeat	1	70	(0)	68204
1926	13.4	13.1	0.8	chr1	35386237	35386611	(213569811)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	68692
43	4.5	0.0	0.0	chr1	35661187	35661232	(213295190)	+	(TG)n	Simple_repeat	1	46	(0)	69172
2056	11.8	1.0	2.0	chr1	35661234	35661537	(213294885)	C	AluJr	SINE/Alu	(9)	303	3	69173
229	29.5	18.9	1.1	chr1	35719186	35719446	(213236976)	+	L2a	LINE/L2	2949	3266	(160)	69319
2692	5.8	0.0	0.0	chr1	35719479	35719789	(213236633)	+	AluSx1	SINE/Alu	1	311	(1)	69320
846	23.5	7.3	7.3	chr1	35768884	35769241	(213187181)	C	MER96B	DNA/hAT-Tip100	(57)	360	3	69414
14	18.4	2.7	0.0	chr1	36084107	36084143	(212872279)	+	(GGAGCGC)n	Simple_repeat	1	38	(0)	70104
12	29.8	2.9	2.8	chr1	36084144	36084175	(212872247)	+	(GGAGCGG)n	Simple_repeat	1	71	(0)	70105
351	30.0	5.9	1.6	chr1	36223857	36224071	(212732351)	C	MIRc	SINE/MIR	(9)	259	29	70423
438	24.0	18.6	1.0	chr1	36450757	36450962	(212505460)	+	MIRb	SINE/MIR	3	260	(8)	70904
620	30.4	8.7	1.3	chr1	37315850	37316082	(211640340)	+	MIR	SINE/MIR	1	252	(10)	72482
2126	6.2	3.9	1.5	chr1	38012049	38012347	(210944075)	C	AluSg	SINE/Alu	(0)	310	1	73916
13	22.0	4.8	0.0	chr1	38046030	38046071	(210910351)	+	(GCC)n	Simple_repeat	1	44	(0)	73970
275	32.6	2.1	0.0	chr1	38076052	38076146	(210880276)	+	MIR3	SINE/MIR	82	178	(30)	74035
269	34.0	3.6	0.0	chr1	38076336	38076441	(210879981)	C	MIRb	SINE/MIR	(6)	262	153	74036
1129	30.0	5.6	3.5	chr1	38183451	38183862	(210772560)	C	L1MC5a	LINE/L1	(9)	2768	2338	74219
12	8.1	3.6	3.5	chr1	38244477	38244504	(210711918)	+	(CTGAG)n	Simple_repeat	1	29	(0)	74344
513	29.2	7.6	1.4	chr1	38489808	38490029	(210466393)	C	LTR79	LTR/ERVL	(30)	497	261	74751
330	32.2	0.7	4.4	chr1	38490239	38490397	(210466025)	C	LTR85b	LTR/Gypsy?	(252)	532	380	74752
247	29.2	0.0	0.0	chr1	38608606	38608670	(210347752)	+	MER20	DNA/hAT-Charlie	134	198	(21)	75007
288	17.3	3.7	0.0	chr1	38990757	38990808	(209965614)	C	Charlie4z	DNA/hAT-Charlie	(88)	79	26	75806
182	32.5	14.9	1.5	chr1	39026636	39026832	(209929590)	+	L2	LINE/L2	2853	3080	(339)	75887
15	0.0	0.0	0.0	chr1	39106029	39106047	(209850375)	+	(GGA)n	Simple_repeat	1	19	(0)	76101
17	22.4	7.4	2.3	chr1	39646262	39646342	(209310080)	+	(CCT)n	Simple_repeat	1	87	(0)	77130
1092	18.1	7.7	7.4	chr1	39738529	39738618	(209217804)	C	MER58B	DNA/hAT-Charlie	(218)	123	39	77323
12	22.6	2.3	2.3	chr1	39901389	39901431	(209054991)	+	(CGTAGT)n	Simple_repeat	1	44	(0)	77651
15	19.9	0.0	0.0	chr1	39901704	39901738	(209054684)	+	G-rich	Low_complexity	1	35	(0)	77652
470	25.6	1.5	0.0	chr1	40653770	40653898	(208302524)	C	MER94	DNA/hAT-Blackjack	(3)	131	1	79244
38	14.9	1.3	1.3	chr1	40654105	40654181	(208302241)	+	(CTCCC)n	Simple_repeat	1	77	(0)	79245
13	10.8	3.1	3.0	chr1	40784271	40784302	(208172120)	+	G-rich	Low_complexity	1	33	(0)	79497
222	27.4	2.8	3.8	chr1	41371745	41371862	(207584560)	+	MIR3	SINE/MIR	15	129	(79)	80686
17	16.9	3.3	6.5	chr1	41371892	41371951	(207584471)	+	(CCT)n	Simple_repeat	1	62	(0)	80687
313	27.3	39.6	2.7	chr1	41417378	41417562	(207538860)	C	MIRb	SINE/MIR	(7)	261	8	80770
13	17.4	5.3	5.0	chr1	42334856	42334912	(206621510)	+	(AGGCCCC)n	Simple_repeat	1	60	(0)	82309
17	26.3	3.1	1.5	chr1	42335243	42335307	(206621115)	+	(CCG)n	Simple_repeat	1	67	(0)	82310
32	0.0	2.6	2.6	chr1	42924886	42924923	(206031499)	+	(CCCAC)n	Simple_repeat	1	39	(0)	83368
22	8.6	2.7	0.0	chr1	42962812	42962848	(205993574)	+	(GGT)n	Simple_repeat	1	38	(0)	83438
268	25.4	8.0	9.8	chr1	43148207	43148359	(205808063)	C	ORSL-2b	DNA/hAT-Tip100	(16)	492	343	83850
32	8.7	0.0	0.0	chr1	43367820	43367868	(205588554)	+	(CTGGGCAGGG)n	Simple_repeat	1	49	(0)	84223
38	0.0	2.6	0.0	chr1	43453835	43453873	(205502549)	+	(GGCGGCG)n	Simple_repeat	1	40	(0)	84327
12	11.5	3.3	3.2	chr1	44417620	44417649	(204538773)	+	(CCTC)n	Simple_repeat	1	31	(0)	85980
715	26.6	20.4	2.2	chr1	44500002	44500615	(204455807)	+	L2a	LINE/L2	2674	3426	(0)	86146
19	17.3	2.4	2.3	chr1	44543534	44543575	(204412847)	+	GA-rich	Low_complexity	1	43	(0)	86231
446	33.0	3.4	1.7	chr1	44592627	44592847	(204363575)	C	MIRb	SINE/MIR	(36)	232	3	86334
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
24	15.2	0.0	3.6	chr1	44775763	44775817	(204180605)	+	G-rich	Low_complexity	1	55	(0)	86689
757	24.1	2.4	0.6	chr1	44819664	44819825	(204136597)	C	AluSx	SINE/Alu	(35)	277	113	86771
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
494	24.2	17.8	1.2	chr1	45328447	45328689	(203627733)	C	L1ME3E	LINE/L1	(9)	6233	5942	87746
7516	23.9	2.6	2.3	chr1	46982162	46984374	(201972048)	C	L1PA15	LINE/L1	(4829)	3326	885	90811
20	14.5	0.0	5.9	chr1	47997697	47997748	(200958674)	+	(CCTCC)n	Simple_repeat	1	48	(0)	92703
12	27.4	4.1	0.0	chr1	48472079	48472127	(200484295)	+	(GGC)n	Simple_repeat	1	51	(0)	93355
5015	6.0	0.6	0.2	chr1	49257179	49257818	(199698604)	C	L1PA3	LINE/L1	(5509)	646	4	94878
2294	10.4	0.7	0.0	chr1	50267848	50268145	(198688277)	+	AluSz	SINE/Alu	1	300	(12)	96446
412	30.3	16.1	0.8	chr1	50279808	50280070	(198676352)	+	L2b	LINE/L2	3055	3365	(10)	96466
539	29.4	9.3	1.4	chr1	50280281	50280487	(198675935)	+	MIRc	SINE/MIR	17	241	(27)	96467
392	29.7	10.4	0.6	chr1	50280541	50280696	(198675726)	+	L2c	LINE/L2	1890	2062	(1357)	96468
13	23.3	0.0	0.0	chr1	51236363	51236397	(197720025)	+	(GCA)n	Simple_repeat	1	35	(0)	98248
12	23.2	0.0	4.5	chr1	51878751	51878794	(197077628)	+	(CCCTCCG)n	Simple_repeat	1	44	(0)	99630
17	4.3	0.0	0.0	chr1	52056281	52056304	(196900118)	+	(CCG)n	Simple_repeat	1	24	(0)	100081
19	14.1	0.0	2.4	chr1	52552993	52553033	(196403389)	+	(CCGCCG)n	Simple_repeat	1	41	(0)	101091
38	25.3	0.8	2.5	chr1	52553102	52553219	(196403203)	+	G-rich	Low_complexity	1	119	(0)	101092
13	8.1	3.9	0.0	chr1	52698361	52698386	(196258036)	+	(GGCGG)n	Simple_repeat	1	27	(0)	101495
432	22.6	8.2	2.4	chr1	52921869	52921995	(196034427)	+	MIRb	SINE/MIR	88	222	(46)	102087
305	25.6	10.9	4.3	chr1	53120529	53120691	(195835731)	+	L2c	LINE/L2	3036	3210	(177)	102478
226	20.0	0.0	0.0	chr1	53220412	53220456	(195735966)	+	L1M1	LINE/L1	1015	1059	(6506)	102673
16	10.8	0.0	3.1	chr1	53220667	53220698	(195735724)	+	(GGCCGG)n	Simple_repeat	1	32	(0)	102674
15	13.2	3.0	0.0	chr1	53326264	53326308	(195630114)	+	G-rich	Low_complexity	1	46	(0)	102873
4516	18.0	3.0	1.4	chr1	53448030	53448912	(195507510)	C	MER21C	LTR/ERVL	(40)	898	1	103102
276	23.7	3.5	1.2	chr1	54052722	54052803	(194903619)	+	L2c	LINE/L2	3245	3355	(32)	104307
20	17.0	0.0	0.0	chr1	54376174	54376213	(194580209)	+	(GTGT)n	Simple_repeat	1	40	(0)	104955
13	22.4	0.0	4.4	chr1	54488682	54488726	(194467696)	+	G-rich	Low_complexity	1	45	(0)	105195
16	0.0	0.0	0.0	chr1	54489318	54489334	(194467088)	+	(A)n	Simple_repeat	1	17	(0)	105196
13	19.2	2.8	0.0	chr1	54489335	54489352	(194467070)	+	A-rich	Low_complexity	2	37	(0)	105197
270	34.3	6.4	0.0	chr1	54781942	54782043	(194174379)	+	MIRc	SINE/MIR	44	152	(116)	105890
22	11.9	0.0	0.0	chr1	55039870	55039906	(193916516)	+	(GCT)n	Simple_repeat	1	37	(0)	106404
16796	3.6	0.4	0.4	chr1	56089639	56092245	(192864177)	+	L1PA3	LINE/L1	125	2730	(3416)	108171
217	28.3	5.2	7.2	chr1	56437243	56437478	(192518944)	+	L2c	LINE/L2	2932	3162	(225)	108817
13	9.8	9.1	0.0	chr1	56510366	56510398	(192446024)	+	A-rich	Low_complexity	1	36	(0)	108987
33	7.0	0.0	0.0	chr1	56579466	56579510	(192376912)	+	(CCTCCTGCT)n	Simple_repeat	1	45	(0)	109122
15	15.3	0.0	0.0	chr1	56579513	56579541	(192376881)	+	(TGC)n	Simple_repeat	1	29	(0)	109123
19	25.6	2.9	5.7	chr1	58782585	58782687	(190173735)	+	(GCTGCC)n	Simple_repeat	1	106	(0)	113505
17	21.6	1.7	4.9	chr1	58785069	58785131	(190171291)	+	(ACACGC)n	Simple_repeat	1	60	(0)	113507
425	29.8	4.4	2.6	chr1	59078420	59078574	(189877848)	+	MIRb	SINE/MIR	40	197	(71)	114146
475	28.6	11.4	0.6	chr1	60949260	60949438	(188006984)	C	MIRb	SINE/MIR	(57)	211	11	117399
27	19.4	3.1	0.0	chr1	61077349	61077413	(187879009)	+	(AGCG)n	Simple_repeat	1	67	(0)	117645
2009	12.8	0.7	0.7	chr1	62212503	62212792	(186743630)	+	AluSc	SINE/Alu	2	291	(18)	119751
12	22.5	2.7	0.0	chr1	63322195	63322231	(185634191)	+	G-rich	Low_complexity	1	38	(0)	121838
11	21.5	8.2	0.0	chr1	63322267	63322315	(185634107)	+	(CCCACG)n	Simple_repeat	1	53	(0)	121839
13	13.2	0.0	0.0	chr1	63322293	63322317	(185634105)	+	(CACC)n	Simple_repeat	1	25	(0)	121840
12	17.6	4.0	5.8	chr1	63594013	63594062	(185362360)	+	(CTCTCC)n	Simple_repeat	1	52	(0)	122314
253	25.0	1.4	4.2	chr1	63773658	63773728	(185182694)	C	MIR3	SINE/MIR	(109)	99	31	122678
225	24.1	11.3	0.2	chr1	63773691	63773791	(185182631)	+	MIR3	SINE/MIR	38	149	(81)	122679
13	12.5	0.0	0.0	chr1	63773832	63773857	(185182565)	+	(GGAGG)n	Simple_repeat	1	26	(0)	122680
13	9.7	0.0	0.0	chr1	63774051	63774072	(185182350)	+	(GCC)n	Simple_repeat	1	22	(0)	122681
27363	3.1	0.0	0.1	chr1	65450280	65456309	(183500113)	C	L1PA3	LINE/L1	(4)	6151	124	125819
23831	7.7	0.7	0.8	chr1	65462003	65468172	(183488250)	C	L1PA6	LINE/L1	(11)	6316	178	125830
16	20.4	6.8	1.6	chr1	66924885	66924943	(182031479)	+	GA-rich	Low_complexity	1	63	(0)	127976
21	22.9	0.0	0.0	chr1	66925047	66925094	(182031328)	+	(GGC)n	Simple_repeat	1	48	(0)	127977
25558	2.5	1.4	1.2	chr1	68923487	68926929	(180029493)	+	L1PA2	LINE/L1	124	3619	(2536)	131325
22	11.7	1.9	5.7	chr1	70221460	70221511	(178734911)	+	(GCG)n	Simple_repeat	1	53	(0)	133042
20	22.2	0.0	0.0	chr1	70221683	70221729	(178734693)	+	(GCG)n	Simple_repeat	1	47	(0)	133043
12	22.1	0.0	0.0	chr1	77281649	77281680	(171674742)	+	(GTGTGT)n	Simple_repeat	1	32	(0)	142614
12	20.6	1.7	8.3	chr1	77281880	77281938	(171674484)	+	(GCGCG)n	Simple_repeat	1	60	(0)	142615
18	7.7	0.0	0.0	chr1	77888599	77888626	(171067796)	+	(CGG)n	Simple_repeat	1	28	(0)	143695
20336	12.6	2.0	3.4	chr1	78483573	78489062	(170467360)	+	L1PA8A	LINE/L1	1	5408	(923)	144667
27735	2.4	0.0	0.1	chr1	82130930	82136890	(166819532)	C	L1PA3	LINE/L1	(20)	6135	180	149401
27528	2.7	0.1	0.0	chr1	83263608	83269631	(165686791)	+	L1PA3	LINE/L1	127	6155	(0)	150948
17	11.3	0.0	0.0	chr1	85201664	85201692	(163754730)	+	(GCG)n	Simple_repeat	1	29	(0)	153785
16	12.8	9.4	1.7	chr1	85201785	85201837	(163754585)	+	G-rich	Low_complexity	1	58	(0)	153786
762	17.2	15.1	0.0	chr1	85577522	85577678	(163378744)	+	MER5A	DNA/hAT-Charlie	1	185	(4)	154401
22997	13.4	3.4	1.0	chr1	85587789	85590110	(163366312)	+	L1M1	LINE/L1	17	2410	(5155)	154408
17492	6.4	0.6	0.1	chr1	86813789	86817284	(162139138)	+	L1P1	LINE/L1	9	3522	(2624)	156145
2981	10.1	0.9	1.2	chr1	86817380	86817802	(162138620)	C	L1P1	LINE/L1	(5550)	605	184	156146
16	16.9	8.3	3.9	chr1	87331365	87331436	(161624986)	+	(CTCCCGT)n	Simple_repeat	1	78	(0)	156912
15	15.5	0.0	5.0	chr1	87331556	87331595	(161624827)	+	G-rich	Low_complexity	1	40	(0)	156913
19	23.8	3.8	3.7	chr1	87331621	87331699	(161624723)	+	GA-rich	Low_complexity	1	82	(0)	156914
8394	13.3	1.1	0.8	chr1	88087643	88089157	(160867265)	C	L1P3b	LINE/L1	(4922)	1539	1	158008
27521	2.6	0.1	0.1	chr1	90057281	90063312	(158893110)	C	L1PA3	LINE/L1	(0)	6155	126	160786
20	6.7	6.2	0.0	chr1	90841477	90841508	(158114914)	+	(AG)n	Simple_repeat	1	34	(0)	161849
17	20.1	0.0	0.0	chr1	91886295	91886334	(157070088)	+	(CCCCCTC)n	Simple_repeat	1	40	(0)	163409
17	17.2	0.0	7.5	chr1	91886335	91886345	(157070077)	+	(CTC)n	Simple_repeat	3	53	(0)	163410
4362	13.7	2.0	0.1	chr1	93296653	93297338	(155659084)	C	L1M1	LINE/L1	(6851)	714	16	166056
23	18.2	5.7	4.3	chr1	93449064	93449151	(155507271)	+	(CCTTT)n	Simple_repeat	1	93	(0)	166316
581	24.5	12.1	1.4	chr1	94236910	94237116	(154719306)	+	MIR	SINE/MIR	10	241	(21)	167492
233	33.8	5.6	1.4	chr1	94642024	94642230	(154314192)	+	MIRc	SINE/MIR	8	223	(45)	168073
2804	7.8	10.6	2.8	chr1	94657491	94657924	(154298498)	C	LTR7Y	LTR/ERV1	(0)	472	1	168099
11	18.1	2.4	4.8	chr1	94927015	94927055	(154029367)	+	(GGCGCG)n	Simple_repeat	1	42	(0)	168516
857	27.6	4.0	4.0	chr1	96003598	96003918	(152952504)	+	Arthur1B	DNA/hAT-Tip100	72	392	(833)	170089
11123	19.1	3.3	4.3	chr1	98783542	98784674	(150171748)	+	L1PA8A	LINE/L1	3	1123	(5230)	173939
17	16.1	0.0	0.0	chr1	100538971	100539005	(148417417)	+	(CCACCT)n	Simple_repeat	1	35	(0)	176729
21005	7.0	5.4	0.2	chr1	100944684	100950115	(148006307)	C	L1PA6	LINE/L1	(375)	5952	210	177255
25	24.6	0.0	0.0	chr1	101996930	101996989	(146959433)	+	(AGC)n	Simple_repeat	1	60	(0)	178764
27016	3.3	0.2	0.0	chr1	104658854	104664872	(144291550)	C	L1PA3	LINE/L1	(0)	6155	124	181932
728	29.4	6.5	0.3	chr1	110313108	110313411	(138643011)	C	L3	LINE/CR1	(39)	4060	3737	189902
387	29.1	5.3	4.3	chr1	110338041	110338320	(138618102)	+	Charlie16a	DNA/hAT-Charlie	44	326	(16)	189971
354	28.9	7.7	6.2	chr1	111739965	111740156	(137216266)	C	L2a	LINE/L2	(26)	3400	3206	191993
28070	2.8	0.3	0.0	chr1	112154800	112160810	(136795612)	C	L1PA2	LINE/L1	(5)	6150	125	192654
383	26.9	9.9	0.0	chr1	112465988	112466132	(136490290)	+	MIRb	SINE/MIR	89	249	(19)	193160
1790	13.8	1.1	4.5	chr1	112808913	112809202	(136147220)	+	AluJr	SINE/Alu	5	284	(28)	193826
250	29.1	2.5	7.1	chr1	112957314	112957439	(135998983)	C	L2c	LINE/L2	(14)	3373	3254	194129
187	21.4	0.0	2.3	chr1	112957430	112957472	(135998950)	C	L2b	LINE/L2	(10)	3365	3324	194130
328	31.4	0.0	0.0	chr1	112957540	112957625	(135998797)	C	MIRb	SINE/MIR	(71)	197	112	194131
13	30.6	0.0	5.6	chr1	113043990	113044061	(135912361)	+	G-rich	Low_complexity	1	72	(0)	194351
2201	7.9	0.0	1.1	chr1	113044114	113044393	(135912029)	+	AluSx1	SINE/Alu	7	283	(29)	194352
13	23.4	6.0	0.0	chr1	114511170	114511219	(134445203)	+	(GAGC)n	Simple_repeat	1	53	(0)	196725
18	14.9	2.6	2.5	chr1	114511211	114511249	(134445173)	+	(GC)n	Simple_repeat	1	40	(0)	196726
1656	15.2	8.1	0.7	chr1	114582047	114582322	(134374100)	C	AluJr	SINE/Alu	(10)	302	5	196898
29	0.0	0.0	0.0	chr1	116854313	116854337	(132102085)	+	(AC)n	Simple_repeat	1	25	(0)	200384
2817	13.2	6.9	1.1	chr1	119340876	119341341	(129615081)	+	LTR36	LTR/ERV1	86	580	(31)	203993
23008	10.2	1.4	2.7	chr1	121581187	121587613	(127368809)	C	L1PA7	LINE/L1	(5)	6464	1	207239
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
32	27.1	7.1	3.3	chr1	145451778	145452001	(103504421)	+	GA-rich	Low_complexity	1	240	(0)	210976
198	31.4	5.3	8.2	chr1	145452205	145452339	(103504083)	C	L2c	LINE/L2	(0)	3387	3257	210977
220	22.9	3.7	11.0	chr1	146051838	146051955	(102904467)	C	AluSg4	SINE/Alu	(190)	120	12	212031
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
654	1.4	0.0	0.0	chr1	148265108	148265179	(100691243)	C	tRNA-Gln-CAG	tRNA	(3)	72	1	215393
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
36	17.6	0.0	2.8	chr1	150236005	150236075	(98720347)	+	(CA)n	Simple_repeat	1	71	(0)	218582
2263	3.8	2.4	3.4	chr1	150515965	150516257	(98440165)	+	AluSg7	SINE/Alu	1	290	(19)	219233
15	12.9	5.0	7.9	chr1	150926373	150926432	(98029990)	+	(CTTCCC)n	Simple_repeat	1	63	(0)	220139
15	15.3	3.5	0.0	chr1	151047687	151047715	(97908707)	+	(CG)n	Simple_repeat	1	30	(0)	220393
277	11.9	0.0	0.0	chr1	151509931	151509972	(97446450)	+	MER57B2	LTR/ERV1	295	336	(67)	221376
89	4.4	0.0	0.0	chr1	151836722	151836815	(97119607)	+	(GT)n	Simple_repeat	1	94	(0)	221957
4940	12.9	4.8	1.5	chr1	153122742	153123450	(95832972)	+	L1PBa	LINE/L1	327	1067	(5796)	223629
1238	17.2	13.6	2.6	chr1	153745825	153746097	(95210325)	+	AluJr	SINE/Alu	2	309	(3)	224703
13	13.1	0.0	0.0	chr1	153922689	153922713	(95033709)	+	(CGGG)n	Simple_repeat	1	25	(0)	225074
14	15.6	5.6	0.0	chr1	153922834	153922892	(95033530)	+	G-rich	Low_complexity	1	62	(0)	225075
17	14.3	4.9	6.2	chr1	153963672	153963732	(94992690)	+	(GAGCGG)n	Simple_repeat	1	64	(0)	225138
1144	15.2	0.0	0.6	chr1	153967505	153967681	(94988741)	+	AluJb	SINE/Alu	137	312	(0)	225151
15	28.9	2.7	2.6	chr1	154220842	154220916	(94735506)	+	G-rich	Low_complexity	1	77	(0)	225710
17	17.9	2.2	2.1	chr1	154558757	154558802	(94397620)	+	(CCTCCT)n	Simple_repeat	1	47	(0)	226415
443	26.6	4.0	9.7	chr1	154559240	154559476	(94396946)	+	MIRc	SINE/MIR	20	242	(26)	226416
209	22.1	0.0	10.5	chr1	154609323	154609398	(94347024)	C	L3b	LINE/CR1	(170)	5062	4995	226478
209	31.6	5.9	0.0	chr1	154609461	154609555	(94346867)	+	L2c	LINE/L2	2981	3081	(306)	226479
273	32.1	1.2	1.2	chr1	154609726	154609810	(94346612)	C	L2b	LINE/L2	(0)	3375	3291	226480
12	25.6	2.0	3.9	chr1	154970969	154971019	(93985403)	+	G-rich	Low_complexity	1	52	(0)	227124
16	16.8	0.0	0.0	chr1	154972915	154972941	(93983481)	+	A-rich	Low_complexity	1	27	(0)	227126
26	22.9	0.0	0.0	chr1	155012402	155012462	(93943960)	+	(CTG)n	Simple_repeat	1	61	(0)	227194
13	21.1	2.6	0.0	chr1	155017383	155017420	(93939002)	+	(CCCCT)n	Simple_repeat	1	39	(0)	227201
17	23.2	0.0	2.1	chr1	155017543	155017589	(93938833)	+	(GCC)n	Simple_repeat	1	47	(0)	227202
2491	2.7	0.0	0.0	chr1	155136462	155136755	(93819667)	+	AluY	SINE/Alu	1	294	(17)	227419
18	14.9	2.0	5.8	chr1	155196240	155196290	(93760132)	+	GA-rich	Low_complexity	1	52	(0)	227525
20	22.8	1.8	0.0	chr1	155208685	155208740	(93747682)	+	(CCCCGC)n	Simple_repeat	1	57	(0)	227541
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
12	18.3	0.0	3.0	chr1	155255459	155255491	(93700931)	+	G-rich	Low_complexity	1	33	(0)	227628
12	23.3	0.0	0.0	chr1	155562151	155562185	(93394237)	+	(ACCGAG)n	Simple_repeat	1	35	(0)	228299
14	10.4	3.0	2.9	chr1	156073704	156073736	(92882686)	+	(TTTCTC)n	Simple_repeat	1	34	(0)	229426
16	25.7	0.0	0.0	chr1	156149983	156150028	(92806394)	+	G-rich	Low_complexity	1	46	(0)	229587
18	26.1	0.0	4.6	chr1	156282735	156282799	(92673623)	+	(CCG)n	Simple_repeat	1	65	(0)	229845
239	22.4	2.0	0.0	chr1	156464017	156464065	(92492357)	C	LTR81A	LTR/Gypsy	(83)	1267	1218	230194
12	19.4	4.7	2.2	chr1	156489172	156489214	(92467208)	+	(GCTGCAG)n	Simple_repeat	1	45	(0)	230227
19	21.9	8.0	2.8	chr1	156489454	156489583	(92466839)	+	(CAGAGA)n	Simple_repeat	1	136	(0)	230228
215	29.3	1.7	0.0	chr1	156498504	156498561	(92457861)	+	MIR3	SINE/MIR	64	122	(86)	230236
13	15.7	2.7	2.7	chr1	156500883	156500931	(92455491)	+	G-rich	Low_complexity	1	49	(0)	230238
17	18.4	0.0	4.3	chr1	156501041	156501087	(92455335)	+	G-rich	Low_complexity	1	47	(0)	230239
14	4.9	0.0	0.0	chr1	156501142	156501162	(92455260)	+	(CCGC)n	Simple_repeat	1	21	(0)	230240
2494	6.0	0.0	0.0	chr1	156505620	156505917	(92450505)	+	AluSx4	SINE/Alu	2	299	(11)	230245
189	32.9	2.7	1.4	chr1	156741566	156741639	(92214783)	C	L3	LINE/CR1	(0)	4099	4025	230666
215	27.3	3.0	1.5	chr1	156752099	156752165	(92204257)	C	L2c	LINE/L2	(1)	3374	3307	230675
11	15.5	0.0	9.3	chr1	156910449	156910491	(92045931)	+	(CCCCTCC)n	Simple_repeat	1	43	(0)	230970
1132	13.3	4.1	10.3	chr1	160162519	160162752	(88793670)	C	MER20	DNA/hAT-Charlie	(0)	219	1	235341
17	20.4	1.9	3.6	chr1	160400510	160400563	(88555859)	+	(CCCCCG)n	Simple_repeat	1	55	(0)	235700
6789	10.8	0.8	1.0	chr1	160652139	160653095	(88303327)	+	LTR5_Hs	LTR/ERVK	1	955	(13)	236079
13	9.7	0.0	0.0	chr1	161306389	161306410	(87650012)	+	(AGC)n	Simple_repeat	1	22	(0)	237266
350	29.6	8.5	0.9	chr1	162056296	162056404	(86900018)	+	MIR3	SINE/MIR	17	134	(134)	238530
28	3.0	2.9	0.0	chr1	169106609	169106642	(79849780)	+	(CCG)n	Simple_repeat	1	35	(0)	249449
262	30.9	8.4	1.3	chr1	171742512	171742665	(77213757)	C	MIR3	SINE/MIR	(11)	197	32	253261
14	28.5	3.1	1.5	chr1	171841146	171841210	(77115212)	+	(GGTGCT)n	Simple_repeat	1	67	(0)	253434
18	12.1	0.0	5.0	chr1	171841403	171841442	(77114980)	+	G-rich	Low_complexity	1	40	(0)	253435
241	37.1	5.7	0.5	chr1	172360597	172360794	(76595628)	C	Plat_L3	LINE/CR1	(515)	3071	2863	254134
1105	19.7	1.8	0.5	chr1	172360821	172361044	(76595378)	+	X7C_LINE	LINE/CR1	2	228	(8)	254135
22606	10.0	0.9	0.5	chr1	174125495	174131901	(74824521)	C	L1PA8A	LINE/L1	(2)	6444	7	256760
26556	2.4	0.0	0.1	chr1	177633928	177639946	(71316476)	+	L1PA2	LINE/L1	134	6150	(5)	261903
12	19.6	2.9	0.0	chr1	179954761	179954795	(69001627)	+	(CGCAGC)n	Simple_repeat	1	36	(0)	265605
11	10.2	2.7	7.9	chr1	181482618	181482654	(67473768)	+	(GCCTCT)n	Simple_repeat	1	38	(0)	268056
17	29.0	0.0	1.7	chr1	181482800	181482859	(67473563)	+	(CGCC)n	Simple_repeat	1	60	(0)	268057
383	30.7	9.7	5.8	chr1	182616033	182616340	(66340082)	C	MLT1N2	LTR/ERVL-MaLR	(31)	531	211	269756
13	22.2	6.8	1.6	chr1	182839245	182839303	(66117119)	+	(GCCCTC)n	Simple_repeat	1	63	(0)	270133
16	25.5	0.0	3.6	chr1	193122096	193122150	(55834272)	+	GA-rich	Low_complexity	1	55	(0)	284394
23788	11.2	1.7	1.4	chr1	196986364	196992657	(51963765)	C	L1PA6	LINE/L1	(1)	6338	13	289332
26849	3.3	0.3	0.1	chr1	198309447	198315462	(50640960)	C	L1PA3	LINE/L1	(0)	6155	124	291041
30	22.1	6.7	0.0	chr1	200039128	200039217	(48917205)	+	GA-rich	Low_complexity	1	96	(0)	293530
14	3.5	6.1	5.7	chr1	200669442	200669474	(48286948)	+	(GGC)n	Simple_repeat	1	35	(0)	294759
14	15.9	0.0	0.0	chr1	200738938	200738965	(48217457)	+	(GCG)n	Simple_repeat	1	28	(0)	294914
14	16.3	4.0	9.1	chr1	200739105	200739178	(48217244)	+	(GACGG)n	Simple_repeat	1	77	(0)	294915
19	23.2	6.0	2.2	chr1	200739179	200739185	(48217237)	+	(GGCGAC)n	Simple_repeat	4	87	(0)	294916
13	0.0	0.0	0.0	chr1	200873648	200873664	(48082758)	+	(TGC)n	Simple_repeat	1	17	(0)	295136
329	28.6	3.8	7.2	chr1	201309567	201309732	(47646690)	C	MamRTE1	LINE/RTE-BovB	(1)	3811	3652	295814
450	25.3	10.6	0.5	chr1	201309738	201309909	(47646513)	+	MER20B	DNA/hAT-Charlie	32	219	(0)	295815
13	16.5	0.0	0.0	chr1	201829212	201829238	(47127184)	+	(GGC)n	Simple_repeat	1	27	(0)	296704
12	23.1	5.1	3.2	chr1	202144164	202144222	(46812200)	+	(TGCCCCC)n	Simple_repeat	1	62	(0)	297384
16	24.1	0.0	2.2	chr1	202144755	202144800	(46811622)	+	(CCG)n	Simple_repeat	1	46	(0)	297386
27	21.5	1.5	1.5	chr1	202643409	202643474	(46312948)	+	(CT)n	Simple_repeat	1	67	(0)	298239
12	28.1	1.9	1.9	chr1	202808521	202808573	(46147849)	+	(CCCGC)n	Simple_repeat	1	54	(0)	298520
208	27.4	20.5	5.9	chr1	202808626	202808761	(46147661)	C	L2c	LINE/L2	(5)	3382	3222	298521
1679	12.8	5.3	2.7	chr1	202927401	202927696	(46028726)	+	AluJb	SINE/Alu	1	304	(8)	298768
2449	8.6	0.0	1.9	chr1	203549632	203549946	(45406476)	C	AluSq	SINE/Alu	(4)	309	1	299811
15	20.3	4.4	0.0	chr1	203626534	203626582	(45329840)	+	(CACCCA)n	Simple_repeat	1	51	(0)	299984
397	33.0	12.3	5.6	chr1	204094075	204094308	(44862114)	C	MIRc	SINE/MIR	(4)	264	13	300970
30	6.0	0.0	0.0	chr1	204336554	204336588	(44619834)	+	(GT)n	Simple_repeat	1	35	(0)	301375
550	28.1	2.3	2.3	chr1	204446261	204446435	(44509987)	+	MER5B	DNA/hAT-Charlie	1	175	(3)	301549
16	12.3	10.9	1.6	chr1	205301735	205301758	(43654664)	+	(AGCAGG)n	Simple_repeat	1	74	(0)	303177
13	23.2	0.0	4.5	chr1	205301759	205301802	(43654620)	+	GA-rich	Low_complexity	1	44	(0)	303178
182	33.3	0.0	0.0	chr1	205431247	205431291	(43525131)	C	L2a	LINE/L2	(17)	3409	3365	303429
517	26.2	5.9	4.8	chr1	205431366	205431533	(43524889)	C	MIRb	SINE/MIR	(18)	250	81	303430
17	26.0	0.0	5.6	chr1	205631508	205631578	(43324844)	+	(CCCGGC)n	Simple_repeat	1	71	(0)	303802
13	12.5	0.0	0.0	chr1	205671099	205671124	(43285298)	+	(CTCCC)n	Simple_repeat	1	26	(0)	303879
3613	6.5	0.5	0.7	chr1	207633751	207634199	(41322223)	C	LTR7	LTR/ERV1	(2)	448	1	306943
328	27.5	2.2	6.4	chr1	208781539	208781678	(40174744)	C	AmnSINE1	SINE/5S-Deu-L2	(72)	503	370	308662
21	8.8	0.0	2.6	chr1	209937687	209937724	(39018698)	+	(CAAAA)n	Simple_repeat	1	38	(0)	310410
25	10.7	3.9	1.9	chr1	209937987	209938038	(39018384)	+	(GGTGG)n	Simple_repeat	1	54	(0)	310411
797	26.6	8.3	4.8	chr1	210373543	210373878	(38582544)	C	LTR82A	LTR/ERVL	(58)	814	466	311067
730	9.9	1.8	1.8	chr1	210374156	210374268	(38582154)	C	U5	snRNA	(2)	114	2	311068
15	20.4	0.0	0.0	chr1	211259202	211259230	(37697192)	+	(C)n	Simple_repeat	1	29	(0)	312388
3974	16.1	3.9	7.2	chr1	211399313	211400193	(37556229)	+	HERVK11-int	LTR/ERVK	1	851	(7102)	312644
2896	8.0	3.0	0.3	chr1	211400194	211400825	(37555597)	+	HERVK11-int	LTR/ERVK	1165	1585	(6368)	312644
16	17.1	4.9	2.3	chr1	212558963	212559003	(36397419)	+	(CG)n	Simple_repeat	1	43	(0)	314754
26579	4.8	0.3	0.8	chr1	212658026	212664183	(36292239)	+	L1PA4	LINE/L1	7	6149	(6)	314919
950	17.4	1.1	0.0	chr1	212857841	212858012	(36098410)	+	MER41D	LTR/ERV1	384	557	(0)	315327
14	17.1	2.4	2.4	chr1	212858391	212858431	(36097991)	+	G-rich	Low_complexity	1	42	(0)	315328
12	27.1	2.3	0.0	chr1	212916960	212917003	(36039419)	+	(ACCCT)n	Simple_repeat	1	45	(0)	315426
15	11.6	0.0	3.3	chr1	213051371	213051400	(35905022)	+	(GGC)n	Simple_repeat	1	30	(0)	315638
13	24.6	1.4	6.9	chr1	215082911	215082981	(33873441)	+	(CGCCG)n	Simple_repeat	1	72	(0)	318635
25828	3.8	0.0	0.5	chr1	219839331	219845537	(29110885)	+	L1PA3	LINE/L1	1	6155	(0)	325236
26294	2.9	0.2	0.2	chr1	219863571	219869595	(29086827)	+	L1PA3	LINE/L1	131	6154	(1)	325252
14	26.7	0.0	2.0	chr1	220271814	220271864	(28684558)	+	G-rich	Low_complexity	1	51	(0)	325956
262	36.9	1.3	4.8	chr1	221169774	221169938	(27786484)	+	MIR1_Amn	SINE/MIR	1	159	(71)	327259
1413	19.8	9.1	3.5	chr1	223030313	223030906	(25925516)	C	LTR8A	LTR/ERV1	(55)	672	1	330065
19	3.7	0.0	3.3	chr1	223845786	223845815	(25110607)	+	(GGC)n	Simple_repeat	1	30	(0)	331313
17	19.6	6.7	3.8	chr1	223845956	223846030	(25110392)	+	(CCGCG)n	Simple_repeat	1	80	(0)	331314
1490	17.7	16.1	0.8	chr1	224340899	224341297	(24615125)	C	MER52D	LTR/ERV1	(1615)	508	37	332380
565	18.7	1.9	1.7	chr1	224341298	224341428	(24614994)	C	L1M4	LINE/L1	(5473)	2406	2211	332376
17	23.8	3.6	0.0	chr1	224434953	224435007	(24521415)	+	(CCGACC)n	Simple_repeat	1	57	(0)	332552
12	16.6	0.0	0.0	chr1	224737217	224737243	(24219179)	+	G-rich	Low_complexity	1	27	(0)	333070
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
15	12.1	5.3	2.5	chr1	225899220	225899257	(23057165)	+	(TCC)n	Simple_repeat	1	40	(0)	334772
462	29.3	7.6	3.1	chr1	226187088	226187249	(22769173)	C	MIRc	SINE/MIR	(11)	257	88	335386
253	27.1	3.9	0.0	chr1	226210492	226210567	(22745855)	C	MIR3	SINE/MIR	(73)	157	81	335457
26	0.0	0.0	0.0	chr1	226405316	226405340	(22551082)	+	(GGGTCT)n	Simple_repeat	1	25	(0)	335830
1737	14.0	0.4	1.1	chr1	226405341	226405605	(22550817)	C	AluSz	SINE/Alu	(49)	263	1	335831
16	0.0	0.0	0.0	chr1	227317512	227317528	(21638894)	+	(A)n	Simple_repeat	1	17	(0)	337280
22323	9.8	1.6	1.7	chr1	227473588	227477577	(21478845)	+	L1PA7	LINE/L1	1	3993	(2468)	337578
20	16.4	0.0	0.0	chr1	228103264	228103304	(20853118)	+	(GCAACCC)n	Simple_repeat	1	41	(0)	338293
14	23.8	2.3	8.0	chr1	228367958	228368043	(20588379)	+	(GCCCCA)n	Simple_repeat	1	88	(0)	338609
243	10.4	11.1	0.0	chr1	228368503	228368550	(20587872)	C	L3	LINE/CR1	(115)	3984	3931	338610
22	19.8	3.5	0.0	chr1	228487322	228487379	(20469043)	+	(TCCCCG)n	Simple_repeat	1	60	(0)	338797
5381	11.6	6.1	2.1	chr1	229093663	229094499	(19861923)	+	MER4D0	LTR/ERV1	1	872	(0)	339674
1561	17.9	1.6	4.7	chr1	229430487	229430805	(19525617)	+	AluJr	SINE/Alu	3	311	(1)	340254
24	6.8	0.0	0.0	chr1	231626638	231626668	(17329754)	+	(GT)n	Simple_repeat	1	31	(0)	343832
15	0.0	0.0	0.0	chr1	231626668	231626684	(17329738)	+	(GC)n	Simple_repeat	1	17	(0)	343833
21	16.6	0.0	0.0	chr1	232805548	232805588	(16150834)	+	GA-rich	Low_complexity	1	41	(0)	345472
24	12.3	2.3	0.0	chr1	233295575	233295618	(15660804)	+	(GCC)n	Simple_repeat	1	45	(0)	346165
15	10.1	9.4	0.0	chr1	233328690	233328721	(15627701)	+	(CG)n	Simple_repeat	1	35	(0)	346217
3983	16.1	6.5	2.1	chr1	233730416	233731227	(15225195)	C	MER61-int	LTR/ERV1	(4367)	850	1	346827
14	12.6	0.0	7.5	chr1	234760507	234760546	(14195876)	+	G-rich	Low_complexity	1	40	(0)	348398
240	33.7	2.1	0.0	chr1	234957180	234957271	(13999151)	+	UCON1	Unknown	580	673	(713)	348734
2426	8.1	0.0	0.7	chr1	235505383	235505689	(13450733)	C	AluSx1	SINE/Alu	(7)	305	1	349878
20	15.7	7.3	2.7	chr1	236686381	236686448	(12269974)	+	G-rich	Low_complexity	1	73	(0)	352104
403	38.2	7.7	4.4	chr1	238251963	238252454	(10703968)	+	L2b	LINE/L2	2674	3178	(197)	354422
1530	23.8	3.9	8.5	chr1	238252455	238253028	(10703394)	C	LTR55	LTR/ERVL?	(2)	546	1	354425
14	27.3	0.0	0.0	chr1	241640678	241640718	(7315704)	+	(CATT)n	Simple_repeat	1	41	(0)	359587
16	10.5	3.2	0.0	chr1	244863106	244863136	(4093286)	+	(CCCCG)n	Simple_repeat	1	32	(0)	364909
194	31.3	18.2	1.0	chr1	247299007	247299106	(1657316)	+	MIRb	SINE/MIR	51	171	(97)	368923
218	21.7	4.8	4.8	chr1	248858380	248858442	(97980)	+	MIR3	SINE/MIR	104	166	(42)	370896
16	17.6	6.6	3.1	chr10	3067478	3067538	(130729884)	+	(GGCGCG)n	Simple_repeat	1	65	(0)	374579
192	30.0	1.6	0.0	chr10	3786657	3786716	(130010706)	C	MamSINE1	SINE/tRNA-RTE	(49)	241	181	375559
21	0.0	7.5	4.7	chr10	4826284	4826323	(128971099)	+	(GCG)n	Simple_repeat	1	43	(0)	376971
2087	11.8	6.9	0.0	chr10	5476240	5476604	(128320818)	+	HERVH-int	LTR/ERV1	7322	7713	(0)	377810
2772	7.4	9.4	0.5	chr10	5476605	5477012	(128320410)	+	LTR7	LTR/ERV1	1	448	(2)	377810
11	30.9	0.0	0.0	chr10	8043684	8043727	(125753695)	+	(GGAGGCG)n	Simple_repeat	1	44	(0)	382050
26416	2.3	0.6	0.1	chr10	10691007	10696998	(123100424)	C	L1PA3	LINE/L1	(1)	6154	135	385955
17	22.1	1.8	3.5	chr10	12042852	12042907	(121754515)	+	(GCCC)n	Simple_repeat	1	57	(0)	388013
13	18.9	2.8	0.0	chr10	12069191	12069226	(121728196)	+	G-rich	Low_complexity	1	37	(0)	388082
373	29.7	7.1	14.6	chr10	13349618	13350063	(120447359)	C	L2	LINE/L2	(801)	2618	2209	390597
26259	3.3	0.2	0.1	chr10	18627419	18633448	(115163974)	+	L1PA3	LINE/L1	145	6155	(0)	399395
3360	7.0	0.5	0.7	chr10	20370846	20371294	(113426128)	C	LTR7	LTR/ERV1	(2)	448	1	401982
9835	12.7	0.4	2.2	chr10	20371295	20371511	(113425911)	C	L1PB1	LINE/L1	(6400)	462	255	401981
14	12.5	0.0	3.5	chr10	21282516	21282544	(112514878)	+	GA-rich	Low_complexity	1	29	(0)	403317
12	18.4	0.0	9.6	chr10	21496082	21496133	(112301289)	+	(CCCT)n	Simple_repeat	1	52	(0)	403844
29	18.2	2.9	1.4	chr10	21534386	21534455	(112262967)	+	GA-rich	Low_complexity	1	72	(0)	403879
2760	5.7	13.0	0.8	chr10	21751374	21751765	(112045657)	C	LTR7	LTR/ERV1	(3)	447	1	404273
28596	2.0	0.1	0.1	chr10	22123890	22129939	(111667483)	C	L1PA2	LINE/L1	(0)	6155	124	404823
24563	5.7	0.4	0.3	chr10	23666417	23672562	(110124860)	C	L1PA4	LINE/L1	(0)	6155	1	407286
16	24.9	0.0	6.2	chr10	24952859	24952922	(108844500)	+	(GCC)n	Simple_repeat	1	64	(0)	409452
851	15.3	0.7	3.5	chr10	27241586	27241729	(106555693)	+	FLAM_C	SINE/Alu	1	140	(3)	413146
770	17.4	6.0	2.3	chr10	27740924	27741099	(106056323)	+	MER5A	DNA/hAT-Charlie	3	185	(4)	413916
13	18.5	7.0	0.0	chr10	27745612	27745654	(106051768)	+	G-rich	Low_complexity	1	46	(0)	413919
13	8.5	10.3	2.3	chr10	30027388	30027426	(103769996)	+	(CAGCTCT)n	Simple_repeat	1	43	(0)	417922
13	4.3	3.9	3.7	chr10	32347086	32347114	(101450308)	+	(CCGCT)n	Simple_repeat	1	29	(0)	421822
17	35.0	0.0	0.0	chr10	35126760	35126834	(98670588)	+	(CCCCTC)n	Simple_repeat	1	75	(0)	426039
11	20.1	9.1	2.8	chr10	35127069	35127134	(98670288)	+	(GCCGGCT)n	Simple_repeat	1	72	(0)	426040
17	20.1	3.5	7.8	chr10	35127230	35127316	(98670106)	+	(AGCGG)n	Simple_repeat	1	90	(0)	426041
37	27.4	3.7	4.1	chr10	35640753	35640941	(98156481)	+	(GCC)n	Simple_repeat	1	196	(0)	426868
27	16.4	5.6	4.3	chr10	35640872	35640960	(98156462)	+	(CGG)n	Simple_repeat	1	94	(0)	426869
12	22.1	3.9	3.8	chr10	43397129	43397179	(90400243)	+	G-rich	Low_complexity	1	53	(0)	433410
1090	9.3	1.9	2.5	chr10	43420119	43420280	(90377142)	C	AluJb	SINE/Alu	(8)	304	144	433466
13	14.1	5.8	5.5	chr10	43420568	43420619	(90376803)	+	G-rich	Low_complexity	1	55	(0)	433467
1697	12.2	5.8	1.4	chr10	43420660	43420938	(90376484)	C	AluJo	SINE/Alu	(20)	292	1	433468
26694	5.3	0.1	0.3	chr10	44106732	44112897	(89684525)	C	L1PA4	LINE/L1	(0)	6155	2	434476
12471	10.7	1.7	2.7	chr10	44232714	44234189	(89563233)	C	L1PA8A	LINE/L1	(4935)	1548	56	434598
244	31.2	4.8	2.1	chr10	44400550	44400690	(89396732)	C	L1M1	LINE/L1	(2393)	3753	3609	434811
237	30.6	2.3	0.0	chr10	44400817	44400901	(89396521)	C	L1MCa	LINE/L1	(2695)	4246	4160	434812
410	28.0	3.4	6.5	chr10	44964506	44964658	(88832764)	+	Charlie15a	DNA/hAT-Charlie	76	223	(1)	435472
17723	8.5	0.7	0.6	chr10	45358751	45362159	(88435263)	+	L1P2	LINE/L1	1	3393	(2753)	435971
27058	4.5	0.3	0.0	chr10	45362160	45368173	(88429249)	+	L1PA6	LINE/L1	124	6154	(0)	435972
19	7.0	0.0	0.0	chr10	46541291	46541320	(87256102)	+	(GCCCC)n	Simple_repeat	1	30	(0)	437835
654	21.2	4.8	3.6	chr10	49360164	49360329	(84437093)	C	MIRb	SINE/MIR	(57)	211	44	441791
25811	5.5	0.5	0.0	chr10	50782475	50788587	(83008835)	C	L1PA4	LINE/L1	(16)	6139	1	443872
14	34.1	0.0	0.0	chr10	51074669	51074730	(82722692)	+	(GAGCTG)n	Simple_repeat	1	62	(0)	444311
3499	5.6	0.0	1.3	chr10	53358813	53359266	(80438156)	C	LTR7	LTR/ERV1	(2)	448	1	447481
274	20.4	0.0	5.7	chr10	53359296	53359385	(80438037)	+	MLT1H2	LTR/ERVL-MaLR	412	560	(0)	447482
11	12.0	4.8	6.8	chr10	55631532	55631573	(78165849)	+	(GCTCCT)n	Simple_repeat	1	44	(0)	450427
26904	3.1	0.1	0.3	chr10	55899642	55905708	(77891714)	+	L1PA3	LINE/L1	126	6155	(0)	450765
22771	6.8	1.2	0.1	chr10	58229728	58235826	(75561596)	+	L1PA6	LINE/L1	3	6154	(0)	453837
210	25.5	15.3	5.0	chr10	59175779	59175877	(74621545)	+	L2a	LINE/L2	3316	3426	(0)	455188
22273	10.9	1.6	3.0	chr10	59470128	59475776	(74321646)	+	L1PA7	LINE/L1	14	5588	(743)	455599
520	30.2	9.3	1.3	chr10	61986131	61986368	(71811054)	+	MIRc	SINE/MIR	3	261	(7)	459383
379	25.5	14.5	6.5	chr10	61986572	61986785	(71810637)	C	MER103C	DNA/hAT-Charlie	(59)	238	5	459384
28432	1.9	0.5	0.1	chr10	62602751	62608755	(71188667)	C	L1PA2	LINE/L1	(0)	6155	125	460325
17	3.6	0.0	6.2	chr10	62818491	62818522	(70978900)	+	(AAGA)n	Simple_repeat	1	32	(0)	460646
509	31.7	2.4	1.2	chr10	63713692	63713854	(70083568)	+	MIR3	SINE/MIR	30	194	(14)	462298
27256	2.8	0.1	0.0	chr10	67387045	67393069	(66404353)	+	L1PA3	LINE/L1	124	6155	(0)	467404
34	24.0	2.1	5.6	chr10	67884874	67885014	(65912408)	+	(CGGCGG)n	Simple_repeat	1	144	(0)	468131
569	3.2	0.0	0.0	chr10	68472182	68472243	(65325179)	C	AluYa5	SINE/Alu	(99)	212	151	469298
209	27.1	19.8	0.0	chr10	69568833	69568917	(64228505)	C	MIR3	SINE/MIR	(30)	178	73	471868
199	36.5	6.8	2.7	chr10	69853302	69853484	(63943938)	+	MIR1_Amn	SINE/MIR	17	207	(23)	472380
13	5.2	0.0	0.0	chr10	70145987	70146006	(63651416)	+	(CTC)n	Simple_repeat	1	20	(0)	472841
15	7.3	6.9	0.0	chr10	70146167	70146195	(63651227)	+	(GCA)n	Simple_repeat	1	31	(0)	472842
196	34.3	0.0	1.4	chr10	70368924	70368994	(63428428)	C	MER5A	DNA/hAT-Charlie	(115)	74	5	473303
227	27.1	11.7	1.5	chr10	70369304	70369434	(63427988)	+	MIRb	SINE/MIR	7	152	(116)	473304
558	25.7	10.1	0.0	chr10	70455186	70455337	(63342085)	C	MIR	SINE/MIR	(66)	196	28	473498
246	29.6	8.8	2.3	chr10	72320812	72320939	(61476483)	+	MIRc	SINE/MIR	85	221	(47)	477045
234	34.8	4.2	1.9	chr10	72321118	72321278	(61476144)	+	MIRb	SINE/MIR	36	200	(68)	477046
28	28.2	1.6	4.0	chr10	73495826	73495949	(60301473)	+	G-rich	Low_complexity	1	126	(0)	479398
1848	12.5	3.7	4.0	chr10	73967334	73967630	(59829792)	+	AluSx	SINE/Alu	1	296	(16)	480278
15	17.6	0.0	4.8	chr10	73997951	73997992	(59799430)	+	G-rich	Low_complexity	1	42	(0)	480356
16	0.0	0.0	0.0	chr10	78029613	78029630	(55767792)	+	(T)n	Simple_repeat	1	18	(0)	487025
196	24.6	1.7	3.4	chr10	78551436	78551494	(55245928)	+	MIR3	SINE/MIR	54	111	(97)	488015
200	28.8	0.0	3.3	chr10	78551508	78551568	(55245854)	C	MIR3	SINE/MIR	(44)	164	106	488016
223	32.9	3.4	0.0	chr10	78965027	78965111	(54832311)	+	MIR3	SINE/MIR	99	186	(22)	488787
373	33.9	19.5	0.0	chr10	79133110	79133469	(54663953)	+	L2c	LINE/L2	2924	3370	(17)	489117
35	0.0	0.0	0.0	chr10	79446195	79446224	(54351198)	+	(GT)n	Simple_repeat	1	30	(0)	489641
13	18.5	7.0	0.0	chr10	80464870	80464912	(53332510)	+	G-rich	Low_complexity	1	46	(0)	491267
28340	2.2	0.0	0.1	chr10	80722510	80728544	(53068878)	C	L1PA2	LINE/L1	(1)	6154	127	491683
28249	2.1	0.1	0.3	chr10	84279968	84286006	(49511416)	+	L1PA2	LINE/L1	124	6151	(4)	496619
529	21.1	13.4	5.9	chr10	84665940	84666125	(49131297)	+	LTR50	LTR/ERVL	1	202	(593)	497179
1018	23.3	10.3	0.0	chr10	84666247	84666525	(49130897)	+	LTR50	LTR/ERVL	475	785	(10)	497179
26444	2.6	0.2	0.0	chr10	84756879	84762878	(49034544)	C	L1PA2	LINE/L1	(19)	6136	127	497301
14	13.2	2.9	2.8	chr10	86521953	86521987	(47275435)	+	G-rich	Low_complexity	1	36	(0)	499654
2680	3.6	1.3	0.0	chr10	86535986	86536290	(47261132)	C	AluY	SINE/Alu	(2)	309	1	499686
3305	5.1	0.2	18.7	chr10	86865051	86865600	(46931822)	+	LTR7	LTR/ERV1	1	448	(2)	500307
22	22.5	0.0	7.8	chr10	87863404	87863493	(45933929)	+	(CTCCC)n	Simple_repeat	1	90	(0)	501930
16	9.3	2.6	5.1	chr10	87863519	87863556	(45933866)	+	(GGCG)n	Simple_repeat	1	39	(0)	501931
22	30.2	2.0	2.9	chr10	87863717	87863818	(45933604)	+	(CGG)n	Simple_repeat	1	104	(0)	501932
252	27.9	12.2	1.1	chr10	88892218	88892304	(44905118)	C	MER5A	DNA/hAT-Charlie	(0)	189	92	503522
198	22.4	2.3	16.7	chr10	88892284	88892324	(44905098)	+	MER5A	DNA/hAT-Charlie	102	137	(52)	503523
42	7.9	0.0	0.0	chr10	88892325	88892378	(44905044)	+	(TG)n	Simple_repeat	1	54	(0)	503524
198	22.4	2.3	16.7	chr10	88892379	88892438	(44904984)	+	MER5A	DNA/hAT-Charlie	138	188	(1)	503523
739	13.1	6.9	0.0	chr10	89333556	89333677	(44463745)	+	AluJo	SINE/Alu	3	133	(179)	504211
26959	3.4	0.3	0.1	chr10	90250614	90256635	(43540787)	+	L1PA3	LINE/L1	124	6155	(0)	505587
16	7.2	6.5	3.0	chr10	93273292	93273322	(40524100)	+	(TG)n	Simple_repeat	1	33	(0)	510789
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
14238	9.7	3.6	0.1	chr10	94756465	94758562	(39038860)	C	L1P2	LINE/L1	(4005)	2179	5	513513
1767	18.1	10.6	1.1	chr10	95182914	95183369	(38614053)	+	MER101-int	LTR/ERV1	3937	4381	(2258)	513853
13	21.8	2.7	0.0	chr10	95183860	95183896	(38613526)	+	(CGC)n	Simple_repeat	1	38	(0)	513856
3509	6.0	0.0	0.7	chr10	95231193	95231643	(38565779)	+	LTR7	LTR/ERV1	1	448	(2)	513935
3825	17.2	6.8	3.8	chr10	96124232	96125093	(37672329)	C	L1M4c	LINE/L1	(5493)	2074	1186	515430
11	17.2	7.7	0.0	chr10	96720027	96720065	(37077357)	+	(TCGCCTC)n	Simple_repeat	1	42	(0)	516502
15	22.1	2.0	2.0	chr10	97334636	97334684	(36462738)	+	(CGGAGC)n	Simple_repeat	1	50	(0)	517743
1736	14.8	7.2	0.0	chr10	97433754	97434024	(36363398)	C	AluSg	SINE/Alu	(12)	298	7	517980
224	27.9	12.7	1.0	chr10	97687725	97687820	(36109602)	+	MIR	SINE/MIR	5	114	(154)	518502
25	23.3	2.8	5.5	chr10	97713845	97713950	(36083472)	+	(CGC)n	Simple_repeat	1	109	(0)	518571
13	21.3	2.1	4.2	chr10	97771276	97771322	(36026100)	+	(GCG)n	Simple_repeat	1	48	(0)	518687
12	20.1	7.5	1.8	chr10	99329299	99329351	(34468071)	+	(CTCCGG)n	Simple_repeat	1	57	(0)	521275
18	14.0	0.0	0.0	chr10	99329390	99329421	(34468001)	+	(GGC)n	Simple_repeat	1	32	(0)	521276
792	34.7	8.8	4.3	chr10	100374124	100374725	(33422697)	C	L2	LINE/L2	(531)	2888	2256	523228
386	23.3	11.9	4.3	chr10	100680702	100680840	(33116582)	+	MIRb	SINE/MIR	102	252	(16)	523795
18	23.5	6.1	0.0	chr10	101080978	101081043	(32716379)	+	GA-rich	Low_complexity	1	70	(0)	524442
18	29.4	2.0	4.0	chr10	101285909	101286006	(32511416)	+	(CCTCCCC)n	Simple_repeat	1	100	(0)	524813
26	28.6	5.0	0.0	chr10	101310960	101311058	(32486364)	+	(CT)n	Simple_repeat	1	104	(0)	524853
15	21.4	0.0	0.0	chr10	101311101	101311138	(32486284)	+	(CTTCCT)n	Simple_repeat	1	38	(0)	524854
19	4.0	0.0	0.0	chr10	101694598	101694623	(32102799)	+	(CCT)n	Simple_repeat	1	26	(0)	525477
22	27.3	1.4	0.0	chr10	101778985	101779071	(32018351)	+	(CACA)n	Simple_repeat	1	88	(0)	525667
19	14.5	4.2	2.0	chr10	101818126	101818173	(31979249)	+	(CCTCTC)n	Simple_repeat	1	50	(0)	525732
34	0.0	0.0	0.0	chr10	101830682	101830710	(31966712)	+	(CA)n	Simple_repeat	1	29	(0)	525757
12	10.8	6.7	0.0	chr10	101830872	101830901	(31966521)	+	(GCACAT)n	Simple_repeat	1	32	(0)	525758
18	24.2	0.0	0.0	chr10	101830994	101831033	(31966389)	+	(CA)n	Simple_repeat	1	40	(0)	525759
363	32.3	11.4	2.5	chr10	102419932	102420131	(31377291)	+	MIRc	SINE/MIR	5	224	(44)	526880
18	8.4	0.0	8.9	chr10	102504177	102504221	(31293201)	+	(GCCCCCG)n	Simple_repeat	1	45	(0)	527056
181	35.1	3.4	0.0	chr10	103265812	103265868	(30531554)	+	L3b	LINE/CR1	5162	5220	(12)	528553
22	20.4	1.7	1.7	chr10	103266040	103266098	(30531324)	+	GA-rich	Low_complexity	1	60	(0)	528554
404	26.7	2.2	0.5	chr10	103636879	103636992	(30160430)	+	MIRb	SINE/MIR	39	160	(102)	529339
237	28.4	2.8	0.5	chr10	104824612	104824692	(28972730)	C	L2a	LINE/L2	(39)	3387	3281	531350
28613	1.0	0.1	0.0	chr10	108310131	108316139	(25481283)	C	L1HS	LINE/L1	(0)	6155	145	536421
22431	12.1	0.9	2.4	chr10	109393185	109399322	(24398100)	+	L1PA8A	LINE/L1	3	6037	(279)	537925
588	28.7	4.2	2.3	chr10	110487062	110487364	(23310058)	C	L1ME4c	LINE/L1	(200)	630	322	539618
402	29.9	5.0	1.5	chr10	112447638	112447773	(21349649)	+	MIRb	SINE/MIR	6	146	(122)	542694
16	25.6	3.4	1.6	chr10	112951983	112952041	(20845381)	+	(CTCT)n	Simple_repeat	1	61	(0)	543552
27607	2.9	0.1	0.2	chr10	115362337	115368543	(18428879)	C	L1PA2	LINE/L1	(3)	6288	131	547365
354	21.9	3.7	7.1	chr10	116835163	116835275	(16962147)	+	MIRb	SINE/MIR	46	157	(111)	549461
19	15.4	3.7	3.6	chr10	118754225	118754278	(15043144)	+	G-rich	Low_complexity	1	56	(0)	552538
17	17.2	0.0	5.9	chr10	118754402	118754452	(15042970)	+	(TGGAGG)n	Simple_repeat	1	51	(0)	552539
14	28.8	0.0	0.0	chr10	118754436	118754481	(15042941)	+	(GGC)n	Simple_repeat	1	46	(0)	552540
26	20.4	2.6	2.5	chr10	119872895	119872905	(13924517)	+	(GCGCG)n	Simple_repeat	1	78	(0)	554724
19	15.8	9.2	1.4	chr10	119872906	119872970	(13924452)	+	(GGC)n	Simple_repeat	1	71	(0)	554725
11874	11.9	1.1	0.4	chr10	120125137	120128408	(13669014)	C	L1PA10	LINE/L1	(3157)	3304	1	555177
328	33.3	5.5	0.0	chr10	120131540	120131692	(13665730)	C	MLT1K	LTR/ERVL-MaLR	(15)	580	419	555183
298	27.9	10.8	0.0	chr10	120979385	120979524	(12817898)	C	MER5A1	DNA/hAT-Charlie	(4)	162	6	556459
13	25.8	0.0	0.0	chr10	123137598	123137634	(10659788)	+	(CGG)n	Simple_repeat	1	37	(0)	559854
17	13.8	5.0	0.0	chr10	124791785	124791824	(9005598)	+	(ACCGCC)n	Simple_repeat	1	42	(0)	562470
16	22.2	2.1	0.0	chr10	125151888	125151934	(8645488)	+	G-rich	Low_complexity	1	48	(0)	563042
180	24.1	4.4	6.5	chr10	125718957	125719049	(8078373)	+	MER5A	DNA/hAT-Charlie	34	124	(65)	563920
27968	3.0	0.1	0.0	chr10	126881868	126887893	(6909529)	+	L1PA3	LINE/L1	124	6154	(1)	565484
524	25.1	10.1	0.6	chr10	127556742	127556921	(6240501)	C	L2a	LINE/L2	(413)	3006	2808	566325
2219	9.9	0.3	3.5	chr10	130105453	130105764	(3691658)	+	AluSq2	SINE/Alu	5	306	(7)	569111
18	24.5	0.0	4.8	chr10	130136409	130136471	(3660951)	+	(GGC)n	Simple_repeat	1	63	(0)	569159
19	18.0	5.2	1.6	chr10	130136516	130136573	(3660849)	+	G-rich	Low_complexity	1	61	(0)	569160
1379	16.6	1.7	0.4	chr10	131900258	131900492	(1896930)	+	AluJb	SINE/Alu	39	276	(36)	571059
17	23.3	0.0	0.0	chr10	132036428	132036472	(1760950)	+	(CGGCGCC)n	Simple_repeat	1	45	(0)	571258
14	15.2	2.5	4.9	chr10	132591628	132591667	(1205755)	+	(GTT)n	Simple_repeat	1	41	(0)	571811
12	20.4	0.0	0.0	chr10	133357044	133357072	(440350)	+	(CCTG)n	Simple_repeat	1	29	(0)	572433
266	26.9	17.9	5.3	chr11	287741	288214	(134798408)	C	L2a	LINE/L2	(359)	3060	2481	573210
942	21.2	1.6	1.9	chr11	288358	288617	(134798005)	+	MER41G	LTR/ERV1	2	260	(625)	573211
255	28.7	6.3	1.4	chr11	355690	355901	(134730721)	C	LTR40b	LTR/ERVL	(37)	425	203	573320
12	16.1	0.0	7.5	chr11	725897	725936	(134360686)	+	(GCCCC)n	Simple_repeat	1	40	(0)	573834
16	11.7	0.0	0.0	chr11	810012	810039	(134276583)	+	(CCG)n	Simple_repeat	1	28	(0)	573972
30	0.0	0.0	3.0	chr11	832893	832925	(134253697)	+	(CGGGG)n	Simple_repeat	1	33	(0)	574001
785	33.8	2.6	2.5	chr11	944525	944954	(134141668)	C	L2a	LINE/L2	(116)	3310	2873	574152
1193	25.0	2.8	2.0	chr11	2213442	2213796	(132872826)	C	L1MB3	LINE/L1	(3)	6180	5823	575540
228	19.4	1.6	0.0	chr11	2213858	2213919	(132872703)	C	L1MA8	LINE/L1	(3)	6288	6226	575541
13	25.9	3.4	3.3	chr11	2270169	2270228	(132816394)	+	(CGC)n	Simple_repeat	1	60	(0)	575608
11	13.2	5.7	2.7	chr11	2700004	2700038	(132386584)	+	(CTGCCG)n	Simple_repeat	1	37	(0)	576063
190	36.2	4.2	1.2	chr11	2703294	2703455	(132383167)	+	MIR3	SINE/MIR	34	200	(8)	576068
14	8.8	0.0	0.0	chr11	2703489	2703512	(132383110)	+	(GCAC)n	Simple_repeat	1	24	(0)	576069
183	24.1	4.9	0.0	chr11	2892310	2892367	(132194255)	+	MIRc	SINE/MIR	89	149	(119)	576288
35	17.9	3.9	3.8	chr11	2892561	2892662	(132193960)	+	(CCT)n	Simple_repeat	1	106	(0)	576289
16	21.4	0.0	2.4	chr11	3797483	3797523	(131289099)	+	(CCG)n	Simple_repeat	1	41	(0)	577720
13	16.6	7.3	0.0	chr11	3797686	3797726	(131288896)	+	GA-rich	Low_complexity	1	44	(0)	577721
298	27.9	6.3	5.5	chr11	3841790	3841899	(131244723)	C	L2b	LINE/L2	(2)	3373	3263	577812
13	12.1	7.7	2.4	chr11	3855142	3855180	(131231442)	+	(GGAGCTG)n	Simple_repeat	1	42	(0)	577859
7906	13.4	3.2	1.2	chr11	5258019	5261292	(129825330)	+	L1PA7	LINE/L1	251	3642	(3220)	579797
9766	8.9	1.8	0.1	chr11	6179152	6180448	(128906174)	+	L1P1	LINE/L1	11	1330	(4825)	580930
19	22.6	3.2	6.2	chr11	7673572	7673664	(127412958)	+	(GCCTCCG)n	Simple_repeat	1	96	(0)	582935
27743	2.1	0.5	0.1	chr11	7734500	7740482	(127346140)	+	L1PA2	LINE/L1	1	6154	(1)	583018
380	31.4	16.6	4.1	chr11	8169152	8169668	(126916954)	+	L2	LINE/L2	2483	3077	(342)	583593
381	26.2	9.0	0.0	chr11	8688629	8688769	(126397853)	C	Charlie2a	DNA/hAT-Charlie	(1199)	1662	1508	584345
13	27.1	0.0	2.2	chr11	9573405	9573450	(125513172)	+	G-rich	Low_complexity	1	46	(0)	586106
180	24.3	0.0	6.7	chr11	9626995	9627069	(125459553)	C	L2a	LINE/L2	(368)	3007	2938	586214
538	19.8	1.0	0.0	chr11	9627100	9627195	(125459427)	C	MER58C	DNA/hAT-Charlie	(0)	215	119	586215
487	25.4	0.9	0.0	chr11	9627271	9627384	(125459238)	C	L2a	LINE/L2	(507)	2912	2798	586214
291	24.2	10.8	0.8	chr11	9758475	9758607	(125328015)	C	MIR	SINE/MIR	(68)	194	47	586501
23603	10.1	2.4	0.7	chr11	9982570	9985317	(125101305)	+	L1PA17	LINE/L1	253	3056	(3806)	586885
307	32.9	2.1	7.7	chr11	10352247	10352401	(124734221)	+	L2b	LINE/L2	3230	3375	(0)	587423
24219	6.8	0.7	0.4	chr11	11691545	11694642	(123391980)	+	L1P2	LINE/L1	1	3085	(3061)	589591
19	25.9	0.0	1.8	chr11	11841953	11842009	(123244613)	+	(GGC)n	Simple_repeat	1	57	(0)	589842
17	15.5	0.0	0.0	chr11	13011100	13011128	(122075494)	+	G-rich	Low_complexity	1	29	(0)	591662
24	14.7	0.0	0.0	chr11	14499566	14499610	(120587012)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	594061
26206	2.6	0.6	0.1	chr11	14628167	14634160	(120452462)	C	L1PA2	LINE/L1	(0)	6155	130	594285
243	30.3	8.5	1.6	chr11	16987466	16987624	(118098998)	+	MIR3	SINE/MIR	2	174	(94)	597834
359	24.7	3.3	6.4	chr11	17738913	17739068	(117347554)	C	MIR3	SINE/MIR	(54)	154	4	599235
191	32.9	2.1	1.4	chr11	18013379	18013523	(117073099)	C	MIRc	SINE/MIR	(35)	233	88	599738
15	11.7	0.0	3.3	chr11	18105972	18106001	(116980621)	+	(CTC)n	Simple_repeat	1	30	(0)	599909
2297	13.2	6.3	6.7	chr11	18770124	18770603	(116316019)	C	L1MB5	LINE/L1	(0)	6174	5697	601190
16	21.7	0.0	0.0	chr11	19817209	19817240	(115269382)	+	A-rich	Low_complexity	1	32	(0)	602917
33	0.0	0.0	0.0	chr11	19818232	19818262	(115268360)	+	(T)n	Simple_repeat	1	31	(0)	602918
1766	19.9	7.6	0.8	chr11	19818291	19818680	(115267942)	C	MER63B	DNA/hAT-Blackjack	(17)	419	1	602919
390	30.0	12.1	7.6	chr11	20000875	20001465	(115085157)	+	L2c	LINE/L2	2737	3382	(5)	603185
12	21.8	1.9	5.6	chr11	20387639	20387691	(114698931)	+	(TCGCGC)n	Simple_repeat	1	54	(0)	603849
419	23.9	0.9	5.2	chr11	20854233	20854347	(114232275)	+	MIR3	SINE/MIR	84	193	(15)	604578
27385	2.8	0.1	0.0	chr11	22523179	22529212	(112557410)	C	L1PA3	LINE/L1	(0)	6155	127	607105
25442	7.0	0.9	0.1	chr11	27665302	27671022	(107415600)	+	L1PA5	LINE/L1	4	5758	(396)	614340
24126	10.2	1.2	0.7	chr11	27682418	27688872	(107397750)	C	L1PA7	LINE/L1	(10)	6459	1	614355
15	43.0	2.9	0.0	chr11	27719670	27719806	(107366816)	+	GA-rich	Low_complexity	1	141	(0)	614397
26748	3.0	0.4	0.8	chr11	28372621	28378682	(106707940)	C	L1PA3	LINE/L1	(2)	6153	124	615420
380	34.4	4.9	5.4	chr11	28698237	28698460	(106388162)	+	L3	LINE/CR1	2720	2942	(1157)	615947
21830	12.0	1.6	0.7	chr11	29219020	29225395	(105861227)	C	L1PA8A	LINE/L1	(1)	6445	3	616711
1004	11.6	4.5	0.0	chr11	29623159	29623305	(105463317)	+	MER57A1	LTR/ERV1	6	159	(273)	617299
389	21.9	5.9	0.0	chr11	29623361	29623456	(105463166)	+	L1MCc	LINE/L1	1121	1222	(5201)	617298
765	29.4	7.1	5.5	chr11	29623450	29624220	(105462402)	C	L1ME3	LINE/L1	(4522)	1720	936	617288
2496	7.2	0.3	0.0	chr11	33015348	33015654	(102070968)	C	AluSx1	SINE/Alu	(4)	308	1	622658
14	19.3	6.4	0.0	chr11	33774502	33774548	(101312074)	+	(CCTGGC)n	Simple_repeat	1	50	(0)	624031
17	26.8	3.8	2.4	chr11	34052227	34052305	(101034317)	+	(GCGCCC)n	Simple_repeat	1	82	(0)	624603
13	20.1	0.0	7.5	chr11	34357947	34357967	(100728655)	+	(GGAGGC)n	Simple_repeat	1	53	(0)	625128
23	26.6	3.5	1.1	chr11	34358179	34358265	(100728357)	+	G-rich	Low_complexity	1	90	(0)	625129
12	9.7	0.0	0.0	chr11	35617736	35617757	(99468865)	+	(TGAA)n	Simple_repeat	1	22	(0)	627048
25027	5.1	0.3	0.0	chr11	35754505	35760643	(99325979)	C	L1PA4	LINE/L1	(0)	6155	1	627283
36	16.4	1.1	4.4	chr11	43547957	43548045	(91538577)	+	G-rich	Low_complexity	1	90	(0)	638644
185	36.8	0.8	2.5	chr11	43959576	43959695	(91126927)	+	MIR1_Amn	SINE/MIR	27	144	(86)	639273
182	31.9	4.0	1.4	chr11	44243795	44243867	(90842755)	+	L3	LINE/CR1	1057	1131	(2968)	639782
286	27.7	13.2	0.9	chr11	44635011	44635123	(90451499)	+	MIR	SINE/MIR	37	165	(97)	640520
13	4.1	8.0	0.0	chr11	45922400	45922424	(89164198)	+	(GGGCA)n	Simple_repeat	1	27	(0)	643027
13	20.3	0.0	0.0	chr11	46278976	46279005	(88807617)	+	(TCCC)n	Simple_repeat	1	30	(0)	643665
15	16.9	2.9	2.8	chr11	46294912	46294946	(88791676)	+	(CT)n	Simple_repeat	1	36	(0)	643699
406	31.8	12.8	4.4	chr11	46846643	46846869	(88239753)	+	MIRc	SINE/MIR	2	250	(18)	644759
566	25.4	2.3	3.6	chr11	47400745	47400965	(87685657)	+	L1M5	LINE/L1	5255	5472	(771)	645825
2089	28.7	10.8	1.5	chr11	57314758	57315771	(77770851)	+	L2a	LINE/L2	449	1568	(1851)	653448
380	30.8	5.7	8.7	chr11	57315772	57316208	(77770414)	+	L2-3_Crp	LINE/L2	458	880	(1216)	653449
197	31.5	2.2	3.3	chr11	57475984	57476075	(77610547)	C	MIRb	SINE/MIR	(176)	92	2	653788
12	17.5	0.0	5.6	chr11	57649539	57649574	(77437048)	+	G-rich	Low_complexity	1	36	(0)	654196
35	14.8	2.9	1.4	chr11	57649705	57649773	(77436849)	+	(TC)n	Simple_repeat	1	71	(0)	654197
12	25.8	0.0	2.3	chr11	57649784	57649826	(77436796)	+	G-rich	Low_complexity	1	43	(0)	654198
528	27.8	16.1	0.0	chr11	57713109	57713317	(77373305)	C	MIRc	SINE/MIR	(16)	252	4	654324
3487	18.8	4.4	5.0	chr11	58927657	58928383	(76158239)	C	HERVK22-int	LTR/ERVK	(6083)	754	32	656121
12	15.9	2.6	5.0	chr11	60951527	60951565	(74135057)	+	(GCTCCGG)n	Simple_repeat	1	40	(0)	659166
194	27.8	7.4	3.1	chr11	61909300	61909422	(73177200)	+	MIRc	SINE/MIR	5	143	(125)	661052
19	18.5	5.5	0.0	chr11	61955654	61955708	(73130914)	+	(CTGGCCC)n	Simple_repeat	1	58	(0)	661170
1472	12.7	5.6	0.8	chr11	61963770	61964006	(73122616)	+	AluSx3	SINE/Alu	49	297	(14)	661184
13	18.9	4.5	2.2	chr11	62602409	62602452	(72484170)	+	G-rich	Low_complexity	1	46	(0)	662389
3229	16.7	6.5	0.8	chr11	62757737	62758341	(72328281)	C	MER21B	LTR/ERVL	(226)	642	1	662725
2009	7.5	5.1	0.7	chr11	62791264	62791542	(72295080)	C	AluSc8	SINE/Alu	(19)	292	1	662814
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
2046	12.0	1.7	0.7	chr11	62851138	62851429	(72235193)	+	AluSc8	SINE/Alu	1	295	(16)	662958
960	17.7	8.6	0.0	chr11	62851443	62851634	(72234988)	+	AluSx1	SINE/Alu	49	258	(54)	662959
26103	2.7	0.1	0.0	chr11	63435304	63441326	(71645296)	+	L1PA2	LINE/L1	124	6154	(1)	663695
756	16.1	8.5	0.6	chr11	63760739	63760900	(71325722)	C	MER5A	DNA/hAT-Charlie	(13)	176	1	664328
27	23.1	3.4	2.2	chr11	63764004	63764092	(71322530)	+	(CTC)n	Simple_repeat	1	92	(0)	664334
2124	11.8	0.7	0.3	chr11	63845733	63846021	(71240601)	C	AluSz	SINE/Alu	(21)	291	2	664519
12	12.6	0.0	3.6	chr11	63919586	63919613	(71167009)	+	G-rich	Low_complexity	1	28	(0)	664648
2454	6.4	0.0	0.3	chr11	63978220	63978515	(71108107)	C	AluSc	SINE/Alu	(14)	295	1	664784
13	11.6	4.9	4.7	chr11	64185451	64185491	(70901131)	+	(GCCGGAG)n	Simple_repeat	1	43	(0)	665142
15	14.3	8.3	1.9	chr11	64630351	64630398	(70456224)	+	(GCC)n	Simple_repeat	1	52	(0)	665965
12	26.2	0.0	2.3	chr11	64644369	64644411	(70442211)	+	(CCTCCC)n	Simple_repeat	1	43	(0)	665985
266	31.5	8.2	0.0	chr11	64726547	64726635	(70359987)	+	L3	LINE/CR1	3950	4046	(53)	666115
19	0.0	0.0	0.0	chr11	64779244	64779264	(70307358)	+	(A)n	Simple_repeat	1	21	(0)	666185
266	16.4	3.5	0.0	chr11	64847419	64847473	(70239149)	+	MIRc	SINE/MIR	63	119	(149)	666329
232	26.4	15.0	3.1	chr11	64847503	64847631	(70238991)	C	MIR3	SINE/MIR	(47)	161	15	666330
17	11.7	8.2	4.5	chr11	65027447	65027512	(70059110)	+	(GGCGGA)n	Simple_repeat	1	68	(0)	666697
13	28.8	0.0	5.7	chr11	65315385	65315454	(69771168)	+	(CGGAGC)n	Simple_repeat	1	70	(0)	667294
204	32.1	5.8	5.8	chr11	65354350	65354435	(69732187)	C	MIRb	SINE/MIR	(59)	209	124	667384
274	24.0	5.0	0.0	chr11	65418923	65419018	(69667604)	C	L2a	LINE/L2	(262)	3164	3064	667508
2443	8.5	1.0	0.0	chr11	65507915	65508220	(69578402)	+	AluSp	SINE/Alu	1	309	(4)	667667
26	0.0	0.0	0.0	chr11	65833561	65833585	(69253037)	+	(CTTCCC)n	Simple_repeat	1	25	(0)	668265
13	15.9	2.6	5.0	chr11	65890858	65890896	(69195726)	+	(GCG)n	Simple_repeat	1	40	(0)	668360
786	33.8	11.7	2.3	chr11	66256822	66257263	(68829359)	+	L3	LINE/CR1	3554	4042	(57)	669133
228	35.0	8.5	0.0	chr11	66257302	66257398	(68829224)	+	MIR	SINE/MIR	145	250	(12)	669134
181	26.7	10.3	3.0	chr11	66282791	66282925	(68803697)	+	MIR3	SINE/MIR	30	175	(33)	669177
309	31.8	12.5	0.0	chr11	66328573	66328698	(68757924)	C	L2a	LINE/L2	(2)	3424	3281	669254
17	22.2	3.3	3.2	chr11	66347447	66347507	(68739115)	+	(CAG)n	Simple_repeat	1	63	(0)	669278
263	32.1	0.9	0.9	chr11	66438454	66438566	(68648056)	C	MIR	SINE/MIR	(129)	133	21	669514
22	26.8	3.8	0.0	chr11	66856356	66856435	(68230187)	+	G-rich	Low_complexity	1	83	(0)	670383
13	22.5	0.0	0.0	chr11	66958062	66958097	(68128525)	+	G-rich	Low_complexity	1	36	(0)	670574
12	21.7	0.0	0.0	chr11	66987572	66987603	(68099019)	+	(TGCCTC)n	Simple_repeat	1	32	(0)	670653
13	16.2	0.0	0.0	chr11	67270543	67270570	(67816052)	+	(CTCC)n	Simple_repeat	1	28	(0)	671339
203	24.6	4.2	4.2	chr11	67391620	67391691	(67694931)	C	MIRc	SINE/MIR	(184)	84	13	671564
13	21.7	2.6	0.0	chr11	67391937	67391974	(67694648)	+	G-rich	Low_complexity	1	39	(0)	671565
401	28.0	11.8	6.3	chr11	67436475	67436928	(67649694)	+	L2a	LINE/L2	2873	3380	(7)	671640
181	21.4	8.7	9.7	chr11	67483484	67483576	(67603046)	+	AmnSINE1	SINE/5S-Deu-L2	33	124	(451)	671731
2048	9.4	5.6	0.7	chr11	68257254	68257541	(66829081)	+	AluSq	SINE/Alu	1	303	(10)	673085
11	16.9	2.9	2.8	chr11	68839232	68839266	(66247356)	+	(CCGCCG)n	Simple_repeat	1	36	(0)	674056
1034	15.1	0.0	0.0	chr11	69034958	69035103	(66051519)	+	AluJb	SINE/Alu	165	310	(2)	674425
392	28.8	10.4	2.7	chr11	69035396	69035652	(66050970)	+	LTR16C	LTR/ERVL	179	457	(32)	674426
17	0.0	4.0	0.0	chr11	69700767	69700791	(65385831)	+	(CCAGG)n	Simple_repeat	1	26	(0)	675530
297	28.8	0.0	0.0	chr11	70202853	70202932	(64883690)	+	MamRep1151	LTR?	626	705	(4)	676432
15	17.1	2.4	2.4	chr11	70662989	70663029	(64423593)	+	GA-rich	Low_complexity	1	42	(0)	677170
1337	24.5	9.9	0.8	chr11	71246844	71247357	(63839265)	+	Charlie2b	DNA/hAT-Charlie	2156	2721	(61)	677935
15	10.7	0.0	5.9	chr11	72238056	72238089	(62848533)	+	G-rich	Low_complexity	1	34	(0)	679593
12	12.2	3.7	0.0	chr11	72333737	72333763	(62752859)	+	(GCCTA)n	Simple_repeat	1	28	(0)	679760
191	35.5	0.0	3.1	chr11	72637380	72637443	(62449179)	+	L2c	LINE/L2	3305	3366	(21)	680310
247	31.7	5.4	8.2	chr11	72643339	72643472	(62443150)	+	MIR3	SINE/MIR	6	135	(73)	680318
442	25.1	9.7	5.1	chr11	72706065	72706261	(62380361)	+	L2b	LINE/L2	2687	2893	(526)	680432
289	30.3	9.0	3.4	chr11	72706249	72706395	(62380227)	+	L2b	LINE/L2	3016	3171	(216)	680432
70	0.0	0.0	0.0	chr11	73142812	73142871	(61943751)	+	(GT)n	Simple_repeat	1	60	(0)	681263
260	25.6	4.9	0.0	chr11	73331285	73331362	(61755260)	C	MIR3	SINE/MIR	(21)	187	106	681644
17	8.2	0.0	0.0	chr11	73597946	73597971	(61488651)	+	(CGG)n	Simple_repeat	1	26	(0)	682197
14	29.5	0.0	4.5	chr11	73598110	73598176	(61488446)	+	G-rich	Low_complexity	1	67	(0)	682198
294	29.0	16.4	0.7	chr11	73647967	73648105	(61438517)	+	MIRc	SINE/MIR	50	214	(54)	682325
574	24.4	0.8	0.0	chr11	73648116	73648242	(61438380)	C	MER5B	DNA/hAT-Charlie	(10)	168	41	682326
581	26.0	11.1	2.4	chr11	73648253	73648465	(61438157)	+	MIRb	SINE/MIR	32	265	(3)	682327
545	24.9	7.0	6.1	chr11	74493875	74494088	(60592534)	C	L2a	LINE/L2	(5)	3421	3206	684202
876	18.8	0.5	7.3	chr11	75383154	75383371	(59703251)	C	AluJr4	SINE/Alu	(108)	204	2	685942
1090	17.8	2.9	7.6	chr11	75383591	75383805	(59702817)	+	MER33	DNA/hAT-Charlie	23	243	(81)	685943
291	32.1	0.9	0.7	chr11	75554191	75554319	(59532303)	C	MIRc	SINE/MIR	(116)	152	23	686331
17	22.6	0.0	0.0	chr11	75554430	75554465	(59532157)	+	(CA)n	Simple_repeat	1	36	(0)	686332
15	19.9	4.3	0.0	chr11	75562064	75562109	(59524513)	+	G-rich	Low_complexity	1	48	(0)	686349
25286	6.3	0.8	0.6	chr11	75974666	75980018	(59106604)	C	L1PA6	LINE/L1	(781)	5365	4	687138
16	27.2	1.5	3.0	chr11	76380912	76380976	(58705646)	+	G-rich	Low_complexity	1	66	(0)	687899
14	30.3	0.0	1.9	chr11	76381067	76381120	(58705502)	+	(CCG)n	Simple_repeat	1	54	(0)	687900
13	8.1	3.9	0.0	chr11	76455544	76455569	(58631053)	+	(TCCCC)n	Simple_repeat	1	27	(0)	688068
237	26.1	8.9	2.1	chr11	76704371	76704464	(58382158)	C	L2b	LINE/L2	(42)	3333	3233	688507
180	23.4	14.7	0.0	chr11	76704587	76704650	(58381972)	C	MIRc	SINE/MIR	(23)	245	171	688508
21	15.5	0.0	0.0	chr11	76782958	76782993	(58303629)	+	(CA)n	Simple_repeat	1	36	(0)	688673
17	23.6	5.6	1.3	chr11	76783061	76783131	(58303491)	+	G-rich	Low_complexity	1	75	(0)	688674
11	14.1	10.3	0.0	chr11	76783236	76783274	(58303348)	+	(CGCCCGG)n	Simple_repeat	1	43	(0)	688675
547	28.6	8.7	0.0	chr11	77172189	77172335	(57914287)	C	MIRc	SINE/MIR	(70)	198	38	689387
219	8.1	2.6	0.0	chr11	77175769	77175805	(57910817)	+	MIRc	SINE/MIR	112	149	(119)	689394
219	36.1	3.6	0.7	chr11	77176197	77176337	(57910285)	+	MIRc	SINE/MIR	29	179	(89)	689395
610	30.5	8.7	0.0	chr11	77176336	77176545	(57910077)	C	MIRb	SINE/MIR	(8)	260	31	689396
12	22.4	0.0	2.6	chr11	77473245	77473282	(57613340)	+	(CCGCC)n	Simple_repeat	1	38	(0)	689963
812	20.6	0.0	1.2	chr11	79315561	79315722	(55770900)	+	MER5A1	DNA/hAT-Charlie	7	166	(0)	693669
369	25.9	2.8	0.6	chr11	85810838	85810962	(49275660)	C	MIR3	SINE/MIR	(49)	159	42	704417
218	28.4	3.9	0.0	chr11	85854743	85854816	(49231806)	C	MIR3	SINE/MIR	(47)	161	85	704507
15	7.5	11.4	2.0	chr11	86069146	86069189	(49017433)	+	(CCCTTCT)n	Simple_repeat	1	49	(0)	704858
12	24.0	4.6	4.4	chr11	86069190	86069210	(49017412)	+	(CCCT)n	Simple_repeat	1	68	(0)	704859
22	18.7	1.5	4.5	chr11	86069367	86069432	(49017190)	+	G-rich	Low_complexity	1	67	(0)	704860
16	13.2	0.0	0.0	chr11	86245010	86245034	(48841588)	+	(CG)n	Simple_repeat	1	25	(0)	705223
15	26.8	3.3	1.6	chr11	86245077	86245136	(48841486)	+	(CGG)n	Simple_repeat	1	62	(0)	705224
24234	8.4	0.9	0.4	chr11	86962526	86968225	(48118397)	C	L1P2	LINE/L1	(439)	5715	5	706382
22104	7.5	1.5	1.5	chr11	87502213	87508384	(47578238)	C	L1PA6	LINE/L1	(0)	6154	4	707243
25834	3.5	0.2	0.5	chr11	87618152	87624199	(47462423)	C	L1PA3	LINE/L1	(2)	6153	126	707426
3044	19.2	2.6	10.6	chr11	88308077	88308867	(46777755)	+	LTR8A	LTR/ERV1	1	726	(1)	708347
20	7.9	0.0	0.0	chr11	88337931	88337957	(46748665)	+	(T)n	Simple_repeat	1	27	(0)	708395
10413	7.3	0.7	0.0	chr11	90240088	90241455	(44845167)	+	L1P1	LINE/L1	17	1394	(4761)	711200
13	8.1	3.9	0.0	chr11	92226891	92226916	(42859706)	+	(CCTCT)n	Simple_repeat	1	27	(0)	713866
23803	7.3	1.3	0.6	chr11	93439099	93445217	(41641405)	C	L1PA6	LINE/L1	(2)	6325	178	715582
2087	8.2	0.0	12.9	chr11	93661104	93661445	(41425177)	C	AluJb	SINE/Alu	(14)	298	1	715957
13	23.4	0.0	2.4	chr11	93661502	93661543	(41425079)	+	G-rich	Low_complexity	1	42	(0)	715958
2465	11.7	0.0	0.0	chr11	94649594	94649902	(40436720)	+	AluSx1	SINE/Alu	1	309	(3)	717467
455	13.5	8.6	26.0	chr11	94650011	94650210	(40436412)	+	MER51B	LTR/ERV1	1	162	(215)	717468
1713	16.2	4.2	1.0	chr11	94650208	94650507	(40436115)	+	MER51B	LTR/ERV1	68	377	(0)	717469
45941	10.3	2.1	2.0	chr11	94650510	94657040	(40429582)	+	HERV4_I-int	LTR/ERV1	1	6539	(0)	717469
492	17.7	4.8	2.8	chr11	94657041	94657173	(40429449)	+	MER51B	LTR/ERV1	1	138	(239)	717469
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
16	23.0	3.9	0.0	chr11	95089758	95089808	(39996814)	+	(CCCGC)n	Simple_repeat	1	53	(0)	718109
26519	2.2	0.1	0.0	chr11	102369167	102375192	(32711430)	C	L1PA2	LINE/L1	(3)	6152	125	727833
4799	12.0	2.8	3.6	chr11	102663836	102664638	(32421984)	+	LTR1A2	LTR/ERV1	42	837	(0)	728309
3839	26.3	3.6	2.9	chr11	103338506	103340261	(31746361)	C	L1M1	LINE/L1	(4690)	2806	10	729323
5758	6.9	0.1	2.0	chr11	103738891	103739704	(31346918)	+	L1PA3	LINE/L1	2	800	(5355)	729890
25191	3.5	0.0	0.2	chr11	103739707	103743731	(31342891)	+	L1PA3	LINE/L1	2168	6155	(0)	729890
10531	14.3	2.0	2.9	chr11	105958720	105961070	(29125552)	C	L1PA10	LINE/L1	(4128)	2355	4	732898
22443	15.0	2.8	2.8	chr11	106955272	106957741	(28128881)	C	L1PA8A	LINE/L1	(3985)	2498	1	734230
357	26.6	6.1	2.8	chr11	107948314	107948456	(27138166)	+	MLT1I	LTR/ERVL-MaLR	1	148	(263)	735910
789	12.3	0.0	6.2	chr11	107948511	107948640	(27137982)	C	AluSx3	SINE/Alu	(30)	281	160	735911
845	6.1	0.0	0.0	chr11	107948641	107948738	(27137884)	C	AluSc	SINE/Alu	(210)	99	2	735912
317	17.3	17.4	0.0	chr11	112823003	112823083	(22263539)	C	UCON88	Unknown	(0)	112	15	743705
32	27.5	0.8	4.0	chr11	113314454	113314577	(21772045)	+	(CCCGGC)n	Simple_repeat	1	125	(0)	744365
2064	17.3	6.5	3.9	chr11	114478078	114478541	(20608081)	C	MER67C	LTR/ERV1	(234)	477	1	746343
309	19.7	21.6	3.0	chr11	116379692	116379822	(18706800)	+	MIRb	SINE/MIR	107	268	(0)	749183
23	11.1	0.0	0.0	chr11	117144738	117144776	(17941846)	+	(GCCCT)n	Simple_repeat	1	39	(0)	750609
2021	12.7	0.0	2.3	chr11	117597447	117597754	(17488868)	C	AluSz	SINE/Alu	(10)	302	2	751416
18	29.9	0.0	0.0	chr11	117986112	117986158	(17100464)	+	(CA)n	Simple_repeat	1	47	(0)	752104
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
19	18.9	7.7	4.1	chr11	118621251	118621341	(16465281)	+	(TCCTC)n	Simple_repeat	1	98	(0)	753251
806	12.2	2.0	7.5	chr11	118715755	118715912	(16370710)	+	LTR39	LTR/ERV1	1	149	(634)	753428
790	16.7	9.3	15.4	chr11	118715913	118716291	(16370331)	+	MER4CL34	LTR/ERV1	1	501	(264)	753429
12	3.9	3.1	9.1	chr11	118909223	118909254	(16177368)	+	(GGCA)n	Simple_repeat	1	33	(0)	753850
17	12.7	2.6	5.1	chr11	118909876	118909913	(16176709)	+	(CA)n	Simple_repeat	1	39	(0)	753851
13	22.8	2.4	0.0	chr11	118922150	118922190	(16164432)	+	GA-rich	Low_complexity	1	42	(0)	753864
14	17.6	0.0	6.7	chr11	118929552	118929596	(16157026)	+	(TCCCCC)n	Simple_repeat	1	45	(0)	753878
19	12.8	0.0	0.0	chr11	119206523	119206556	(15880066)	+	(CAC)n	Simple_repeat	1	34	(0)	754443
25	15.6	0.0	1.9	chr11	119334698	119334749	(15751873)	+	(CGACC)n	Simple_repeat	1	52	(0)	754708
290	25.0	11.8	1.3	chr11	119729597	119729745	(15356877)	C	MIR3	SINE/MIR	(24)	184	30	755358
14799	12.6	1.9	2.0	chr11	121371141	121372561	(13714061)	C	PRIMA4-int	LTR/ERV1	(833)	7437	6017	758001
9643	13.7	6.0	0.5	chr11	121372611	121374163	(13712459)	C	PRIMA4-int	LTR/ERV1	(6625)	1645	1	758001
32	18.7	5.6	1.1	chr11	121801602	121801690	(13284932)	+	GA-rich	Low_complexity	1	94	(0)	758647
14	25.5	4.2	4.0	chr11	121929305	121929376	(13157246)	+	G-rich	Low_complexity	1	75	(0)	758816
24	22.5	5.0	4.8	chr11	123195648	123195769	(11890853)	+	(TTCCCTC)n	Simple_repeat	1	122	(0)	761048
31	20.8	0.0	0.0	chr11	123741468	123741535	(11345087)	+	(CCCGG)n	Simple_repeat	1	68	(0)	762084
12	13.9	6.2	0.0	chr11	125141856	125141887	(9944735)	+	G-rich	Low_complexity	1	34	(0)	764034
258	36.8	2.6	1.1	chr11	125263045	125263207	(9823415)	+	MIRc	SINE/MIR	3	169	(99)	764239
13	18.0	0.0	7.0	chr11	125405102	125405144	(9681478)	+	(CCCA)n	Simple_repeat	1	43	(0)	764450
388	32.6	0.7	6.6	chr11	126368870	126369020	(8717602)	C	MER91A	DNA/hAT-Tip100	(8)	188	47	765987
277	35.3	5.6	9.1	chr11	126440638	126440955	(8645667)	C	L2c	LINE/L2	(0)	3387	3082	766096
17	13.0	7.1	0.0	chr11	128522439	128522480	(6564142)	+	G-rich	Low_complexity	1	45	(0)	769017
316	30.3	0.9	4.4	chr11	133968641	133968754	(1117868)	+	MIRb	SINE/MIR	141	250	(18)	776579
21	16.4	0.0	0.0	chr12	389549	389590	(132885719)	+	(CGAGG)n	Simple_repeat	1	42	(0)	778653
20	27.6	0.0	0.0	chr12	389591	389606	(132885703)	+	(CGGCG)n	Simple_repeat	4	61	(0)	778654
33	3.1	0.0	0.0	chr12	990935	990967	(132284342)	+	(GT)n	Simple_repeat	1	33	(0)	779867
45	25.6	3.8	4.5	chr12	991143	991354	(132283955)	+	(CGG)n	Simple_repeat	1	220	(0)	779868
16	17.7	1.7	6.8	chr12	991627	991684	(132283625)	+	G-rich	Low_complexity	1	59	(0)	779869
620	22.0	0.8	0.0	chr12	1445848	1445979	(131829330)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	233	780678
621	14.3	0.9	2.6	chr12	1446003	1446117	(131829192)	C	MLT1A0	LTR/ERVL-MaLR	(252)	113	1	780678
29	0.0	0.0	0.0	chr12	1594157	1594183	(131681126)	+	(GCC)n	Simple_repeat	1	27	(0)	780919
28	26.6	2.8	2.7	chr12	1690996	1691104	(131584205)	+	(CGG)n	Simple_repeat	1	112	(0)	781100
331	33.8	4.4	3.5	chr12	2998624	2998825	(130276484)	C	MIRc	SINE/MIR	(56)	212	3	783110
18	28.1	0.0	0.0	chr12	3151153	3151200	(130124109)	+	(TG)n	Simple_repeat	1	48	(0)	783411
200	31.5	5.3	3.3	chr12	4135218	4135309	(129140000)	+	Tigger19a	DNA/TcMar-Tigger	228	308	(15)	785000
14	18.8	0.0	2.6	chr12	5945400	5945437	(127329872)	+	G-rich	Low_complexity	1	38	(0)	787771
30	12.3	0.0	1.8	chr12	6371514	6371573	(126903736)	+	(GTGGGG)n	Simple_repeat	1	58	(0)	788578
22	2.4	9.1	2.1	chr12	6533857	6533900	(126741409)	+	(CCCAGTG)n	Simple_repeat	1	48	(0)	788907
1291	22.8	17.0	4.9	chr12	6758516	6758967	(126516342)	C	L2a	LINE/L2	(366)	3053	2536	789335
17	24.3	1.9	0.0	chr12	6778866	6778910	(126496399)	+	(CGCGCA)n	Simple_repeat	1	45	(0)	789365
31	3.3	0.0	0.0	chr12	6778911	6778941	(126496368)	+	(CA)n	Simple_repeat	1	31	(0)	789366
17	24.3	1.9	0.0	chr12	6778942	6778953	(126496356)	+	(CGCGCA)n	Simple_repeat	5	17	(0)	789367
13	13.0	0.0	7.7	chr12	6867692	6867730	(126407579)	+	(GCCGG)n	Simple_repeat	1	39	(0)	789530
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
12	18.8	2.6	2.6	chr12	7090744	7090781	(126184528)	+	(CTCCCTC)n	Simple_repeat	1	39	(0)	789928
14	14.5	5.0	2.4	chr12	7109056	7109095	(126166214)	+	(CTTCCT)n	Simple_repeat	1	42	(0)	789964
185	32.3	4.4	1.5	chr12	7787741	7787806	(125487503)	+	L3	LINE/CR1	1672	1739	(2360)	791037
200	30.8	4.4	1.5	chr12	7890748	7890813	(125384496)	+	L3	LINE/CR1	1672	1739	(2360)	791314
19	15.3	0.0	6.1	chr12	8033623	8033671	(125241638)	+	(CCT)n	Simple_repeat	1	49	(0)	791669
12	33.2	0.0	1.7	chr12	8698023	8698080	(124577229)	+	G-rich	Low_complexity	1	58	(0)	792747
13	20.7	5.8	1.8	chr12	8698397	8698448	(124576861)	+	G-rich	Low_complexity	1	55	(0)	792748
23081	12.4	1.8	0.7	chr12	9170009	9176475	(124098834)	+	L1PA11	LINE/L1	12	7607	(2)	793511
14	22.7	2.0	3.9	chr12	11500684	11500733	(121774576)	+	(GCC)n	Simple_repeat	1	51	(0)	796566
13	10.8	3.1	3.0	chr12	12357357	12357388	(120917921)	+	(TCCCTG)n	Simple_repeat	1	33	(0)	798018
194	32.1	4.7	0.0	chr12	12786644	12786724	(120488585)	C	MIRc	SINE/MIR	(87)	181	97	798776
59	3.3	0.0	0.0	chr12	13000193	13000254	(120275055)	+	(GGCGGCAG)n	Simple_repeat	1	62	(0)	799225
15	12.1	3.9	7.4	chr12	13000268	13000319	(120274990)	+	(GGCAGA)n	Simple_repeat	1	54	(0)	799226
13	25.0	3.2	4.6	chr12	13255927	13256018	(120019291)	+	GA-rich	Low_complexity	1	90	(0)	799597
24	25.9	3.3	2.1	chr12	14365688	14365778	(118909531)	+	(GCG)n	Simple_repeat	1	94	(0)	801269
25123	4.2	0.3	0.2	chr12	16377146	16383292	(116892017)	C	L1PA4	LINE/L1	(0)	6155	3	804211
21199	10.6	1.3	1.0	chr12	18890261	18896672	(114378637)	C	L1PA8A	LINE/L1	(1)	6445	4	807220
18	0.0	4.0	0.0	chr12	19130684	19130708	(114144601)	+	(AGG)n	Simple_repeat	1	26	(0)	807588
31	16.6	1.4	1.4	chr12	19439369	19439437	(113835872)	+	G-rich	Low_complexity	1	70	(0)	808198
25	22.0	1.4	2.7	chr12	19439621	19439692	(113835617)	+	GA-rich	Low_complexity	1	73	(0)	808199
290	18.9	9.8	0.0	chr12	22288286	22288359	(110986950)	+	MIRc	SINE/MIR	21	102	(166)	811909
14	20.5	2.6	0.0	chr12	22625288	22625326	(110649983)	+	(CCGC)n	Simple_repeat	1	40	(0)	812441
19	26.9	0.0	3.0	chr12	22625357	22625422	(110649887)	+	(GTC)n	Simple_repeat	1	66	(0)	812442
53	0.0	0.0	0.0	chr12	24947168	24947212	(108328097)	+	(CA)n	Simple_repeat	1	45	(0)	815692
20	8.0	0.0	0.0	chr12	26124959	26124985	(107150324)	+	(CA)n	Simple_repeat	1	27	(0)	817539
12	33.5	0.0	0.0	chr12	26125102	26125153	(107150156)	+	G-rich	Low_complexity	1	52	(0)	817540
7326	13.8	1.1	2.5	chr12	29272107	29274047	(104001262)	C	L1PA10	LINE/L1	(4494)	1989	56	822155
30	22.1	0.0	0.0	chr12	30822294	30822356	(102452953)	+	A-rich	Low_complexity	1	63	(0)	824248
16	15.4	2.8	0.0	chr12	31362735	31362770	(101912539)	+	(TTTTG)n	Simple_repeat	1	37	(0)	825106
12	24.2	4.5	0.0	chr12	31362973	31363016	(101912293)	+	(TGCA)n	Simple_repeat	1	46	(0)	825107
11	15.9	6.5	4.1	chr12	31363055	31363100	(101912209)	+	(GGAGGT)n	Simple_repeat	1	49	(0)	825108
1647	20.4	5.6	7.6	chr12	31682254	31682804	(101592505)	C	LTR55	LTR/ERVL?	(2)	546	8	825803
5095	14.0	6.0	1.9	chr12	31717944	31719305	(101556004)	C	L1P2	LINE/L1	(4545)	1639	134	825885
24	11.9	1.5	7.6	chr12	31898173	31898237	(101377072)	+	G-rich	Low_complexity	1	66	(0)	826312
19	20.8	9.0	2.1	chr12	31898238	31898255	(101377054)	+	GA-rich	Low_complexity	21	97	(0)	826313
26844	3.7	0.1	0.1	chr12	33331934	33337877	(99937432)	+	L1PA3	LINE/L1	207	6155	(0)	828915
18	7.6	0.0	0.0	chr12	33440021	33440048	(99835261)	+	(GAGG)n	Simple_repeat	1	28	(0)	829057
18	22.1	6.7	1.2	chr12	38905614	38905688	(94369621)	+	G-rich	Low_complexity	1	80	(0)	831698
8794	12.8	2.8	1.0	chr12	39119415	39123019	(94152290)	C	L1PB1	LINE/L1	(0)	6867	834	831988
18466	15.1	1.3	1.2	chr12	40817502	40820062	(92455247)	C	L1PA10	LINE/L1	(3824)	2637	59	834220
27436	3.2	0.1	0.1	chr12	41637416	41643440	(91631869)	C	L1PA2	LINE/L1	(2)	6153	127	835319
13	0.0	5.0	0.0	chr12	45727547	45727566	(87547743)	+	(GGC)n	Simple_repeat	1	21	(0)	841277
15	29.2	2.9	1.4	chr12	45729041	45729108	(87546201)	+	(GGCA)n	Simple_repeat	1	70	(0)	841278
17	13.2	5.5	5.2	chr12	45990597	45990651	(87284658)	+	(CCTC)n	Simple_repeat	1	58	(0)	841694
1531	21.7	8.0	4.5	chr12	46005788	46006235	(87269074)	+	MSTA1	LTR/ERVL-MaLR	1	465	(0)	841722
16	29.1	1.4	4.0	chr12	46383333	46383405	(86891904)	+	GA-rich	Low_complexity	1	74	(0)	842183
16500	8.8	0.8	0.9	chr12	46582779	46586459	(86688850)	C	L1PA6	LINE/L1	(2478)	3668	5	842463
220	32.6	9.4	2.9	chr12	47812744	47812882	(85462427)	C	MIRb	SINE/MIR	(116)	152	4	844235
13	13.1	0.0	0.0	chr12	47963539	47963563	(85311746)	+	(GCGC)n	Simple_repeat	1	25	(0)	844505
20	22.6	0.0	0.0	chr12	48119197	48119243	(85156066)	+	GA-rich	Low_complexity	1	47	(0)	844727
37	26.2	2.4	5.2	chr12	48788896	48789065	(84486244)	+	(GCCC)n	Simple_repeat	1	174	(0)	845785
12	15.3	3.5	0.0	chr12	48957329	48957357	(84317952)	+	(CGC)n	Simple_repeat	1	30	(0)	846157
13	19.4	8.8	2.7	chr12	49131483	49131550	(84143759)	+	(CCGAGCC)n	Simple_repeat	1	74	(0)	846446
22	21.4	1.3	6.2	chr12	49367401	49367479	(83907830)	+	(GGC)n	Simple_repeat	1	80	(0)	847046
16	16.5	0.0	0.0	chr12	49828079	49828105	(83447204)	+	G-rich	Low_complexity	1	27	(0)	847878
13	15.4	0.0	3.2	chr12	49828133	49828163	(83447146)	+	GA-rich	Low_complexity	1	31	(0)	847879
11	20.8	0.0	2.9	chr12	49828456	49828490	(83446819)	+	(CCCCGC)n	Simple_repeat	1	35	(0)	847880
408	28.0	3.9	3.2	chr12	49843240	49843394	(83431915)	C	MIRb	SINE/MIR	(27)	241	86	847909
818	26.0	7.2	2.8	chr12	50055587	50055839	(83219470)	C	MIRb	SINE/MIR	(0)	268	4	848343
12	11.7	7.3	4.5	chr12	50055854	50055894	(83219415)	+	(CCTCA)n	Simple_repeat	1	44	(0)	848344
23	8.8	0.0	0.0	chr12	50764042	50764077	(82511232)	+	(GCCCCC)n	Simple_repeat	1	36	(0)	849956
13	12.7	2.6	5.1	chr12	51391968	51392005	(81883304)	+	(AGCCCGG)n	Simple_repeat	1	39	(0)	851262
192	26.8	17.8	0.0	chr12	51856253	51856349	(81418960)	+	MIR3	SINE/MIR	58	175	(33)	852011
346	35.1	1.5	0.9	chr12	52125757	52125902	(81149407)	+	MIRb	SINE/MIR	22	175	(93)	852471
56	0.0	2.0	0.0	chr12	52143914	52143964	(81131345)	+	(TG)n	Simple_repeat	1	52	(0)	852511
241	33.0	5.9	0.0	chr12	53079716	53079827	(80195482)	C	MIRb	SINE/MIR	(15)	253	135	854016
17	24.4	0.0	4.8	chr12	53180926	53180988	(80094321)	+	G-rich	Low_complexity	1	63	(0)	854225
12	27.1	0.0	2.2	chr12	53214783	53214828	(80060481)	+	(CCCCAG)n	Simple_repeat	1	46	(0)	854275
187	32.1	7.9	5.4	chr12	53324658	53324805	(79950504)	+	L2b	LINE/L2	3217	3368	(7)	854489
12	14.9	8.1	0.0	chr12	53371096	53371132	(79904177)	+	(CTCCT)n	Simple_repeat	1	40	(0)	854609
2646	5.8	0.0	0.3	chr12	53477385	53477694	(79797615)	+	AluY	SINE/Alu	2	310	(1)	854837
13	20.3	0.0	4.7	chr12	53493035	53493077	(79782232)	+	G-rich	Low_complexity	1	43	(0)	854860
113	0.0	0.0	0.0	chr12	53498909	53499004	(79776305)	+	(TG)n	Simple_repeat	1	96	(0)	854870
1792	17.7	0.0	3.2	chr12	54301767	54302076	(78973233)	C	AluJo	SINE/Alu	(12)	300	1	856201
12	16.1	5.3	2.5	chr12	54588377	54588414	(78686895)	+	(TGCCC)n	Simple_repeat	1	40	(0)	856691
26794	4.5	0.2	0.1	chr12	54882886	54889034	(78386275)	C	L1PA3	LINE/L1	(3)	6152	1	857080
17	7.0	6.2	2.9	chr12	54998105	54998136	(78277173)	+	(AC)n	Simple_repeat	1	34	(0)	857233
17	14.0	0.0	0.0	chr12	55745711	55745771	(77529538)	+	(CCTCC)n	Simple_repeat	1	61	(0)	858165
19	27.9	2.5	2.4	chr12	56080060	56080082	(77195227)	+	(CTCC)n	Simple_repeat	1	32	(50)	858883
18	8.7	0.0	0.0	chr12	56080083	56080107	(77195202)	+	(CT)n	Simple_repeat	1	25	(0)	858884
19	27.9	2.5	2.4	chr12	56080108	56080141	(77195168)	+	(CTCC)n	Simple_repeat	33	82	(0)	858883
37	0.0	0.0	0.0	chr12	57112147	57112178	(76163131)	+	(AC)n	Simple_repeat	1	32	(0)	860716
50	0.0	4.0	0.0	chr12	57112214	57112263	(76163046)	+	(CA)n	Simple_repeat	1	52	(0)	860717
12	21.8	2.9	0.0	chr12	57128853	57128886	(76146423)	+	GA-rich	Low_complexity	1	35	(0)	860762
38	17.2	0.0	0.0	chr12	57522713	57522784	(75752525)	+	(GGC)n	Simple_repeat	1	72	(0)	861463
1757	14.1	0.0	1.4	chr12	57837440	57837723	(75437586)	+	AluSz	SINE/Alu	33	312	(0)	861904
15	13.7	3.1	0.0	chr12	57844889	57844920	(75430389)	+	(CTCC)n	Simple_repeat	1	33	(0)	861912
13	22.5	0.0	4.4	chr12	57845172	57845216	(75430093)	+	(GCTCCG)n	Simple_repeat	1	45	(0)	861913
19711	10.2	1.1	2.4	chr12	58836439	58841821	(74433488)	C	L1P2	LINE/L1	(1045)	5416	5	863322
3201	6.0	0.0	7.0	chr12	59328505	59328986	(73946323)	C	LTR7	LTR/ERV1	(2)	448	1	863965
56	0.0	0.0	0.0	chr12	59597223	59597270	(73678039)	+	(AC)n	Simple_repeat	1	48	(0)	864297
22780	9.5	1.0	2.3	chr12	62107993	62114447	(71160862)	C	L1PA7	LINE/L1	(3)	6466	8	867449
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
19	27.1	0.0	5.1	chr12	64691667	64691744	(68583565)	+	G-rich	Low_complexity	1	78	(0)	871637
2297	9.9	0.0	1.3	chr12	65897678	65897980	(67377329)	+	AluSq2	SINE/Alu	1	299	(14)	873515
10405	18.6	6.6	6.0	chr12	67468160	67470214	(65805095)	C	L1MA1	LINE/L1	(3184)	2141	14	875956
12	12.0	0.0	6.5	chr12	67649960	67649990	(65625319)	+	(GCGG)n	Simple_repeat	1	31	(0)	876224
22	9.4	2.9	0.0	chr12	68358391	68358424	(64916885)	+	(AC)n	Simple_repeat	1	35	(0)	877232
11	32.1	1.9	0.0	chr12	68358589	68358642	(64916667)	+	G-rich	Low_complexity	1	55	(0)	877233
24	19.3	0.0	0.0	chr12	68808591	68808643	(64466666)	+	(GGCTCGG)n	Simple_repeat	1	53	(0)	878136
13	16.7	4.8	2.3	chr12	69470606	69470647	(63804662)	+	(GCTCCGG)n	Simple_repeat	1	44	(0)	879354
13	0.0	5.0	0.0	chr12	70366024	70366043	(62909266)	+	(TTA)n	Simple_repeat	1	21	(0)	880780
4833	12.6	16.2	2.3	chr12	70807587	70808619	(62466690)	+	MER11B	LTR/ERVK	33	1236	(0)	881451
26350	2.0	0.1	0.0	chr12	71118073	71124103	(62151206)	+	L1PA2	LINE/L1	125	6155	(0)	881892
13	18.6	4.8	6.2	chr12	72272276	72272337	(61002972)	+	(GCGAG)n	Simple_repeat	1	65	(0)	883612
27508	3.0	0.1	0.1	chr12	73977928	73983898	(59291411)	+	L1PA3	LINE/L1	126	6469	(1)	885655
16	17.2	7.4	1.7	chr12	77065820	77065843	(56209466)	+	(CGG)n	Simple_repeat	1	57	(0)	890306
16	11.3	0.0	0.0	chr12	77065844	77065872	(56209437)	+	(GGCGC)n	Simple_repeat	1	29	(0)	890307
14	9.6	0.0	0.0	chr12	77065873	77065895	(56209414)	+	(GGA)n	Simple_repeat	1	23	(0)	890308
27570	2.6	0.1	0.0	chr12	79039622	79045645	(54229664)	C	L1PA2	LINE/L1	(0)	6155	126	892975
12	15.3	5.3	2.5	chr12	79934885	79934922	(53340387)	+	(CGCTTC)n	Simple_repeat	1	40	(0)	894281
28246	1.5	0.2	0.0	chr12	80244170	80250184	(53025125)	C	L1PA2	LINE/L1	(0)	6155	131	894751
1960	23.6	5.3	2.0	chr12	84805422	84805910	(48469399)	+	MER67D	LTR/ERV1	1	506	(8)	900768
22	33.4	0.0	0.0	chr12	84912766	84912840	(48362469)	+	(GT)n	Simple_repeat	1	75	(0)	900920
15	29.4	1.6	1.5	chr12	85280565	85280628	(47994681)	+	(GGAAGGT)n	Simple_repeat	1	65	(0)	901405
27499	2.5	0.1	0.2	chr12	85312420	85318459	(47956850)	C	L1PA2	LINE/L1	(0)	6155	126	901437
26922	2.8	0.2	0.0	chr12	88846992	88853008	(44422301)	+	L1PA3	LINE/L1	125	6155	(0)	906075
351	32.8	2.3	5.5	chr12	89245272	89245452	(44029857)	+	L2c	LINE/L2	2980	3154	(233)	906689
15	24.7	0.0	2.2	chr12	89352704	89352748	(43922561)	+	GA-rich	Low_complexity	1	45	(0)	906881
11	15.0	4.9	4.7	chr12	89709930	89709970	(43565339)	+	G-rich	Low_complexity	1	43	(0)	907478
15	27.7	0.0	4.5	chr12	93570274	93570339	(39704970)	+	G-rich	Low_complexity	1	66	(0)	913736
30	18.5	2.7	1.3	chr12	93571496	93571570	(39703739)	+	(CTCC)n	Simple_repeat	1	77	(0)	913738
14	21.8	5.5	1.7	chr12	93571799	93571853	(39703456)	+	(CCCCTC)n	Simple_repeat	1	58	(0)	913739
17	8.2	0.0	0.0	chr12	93571879	93571904	(39703405)	+	(GCG)n	Simple_repeat	1	26	(0)	913740
14	22.0	0.0	0.0	chr12	93571905	93571915	(39703394)	+	(GCCGAG)n	Simple_repeat	1	37	(0)	913741
277	28.8	16.3	0.0	chr12	93799129	93799267	(39476042)	+	Charlie29a	DNA/hAT-Charlie	6	171	(548)	914143
24179	6.8	0.9	0.3	chr12	94389500	94395161	(38880148)	+	L1PA6	LINE/L1	3	5682	(472)	915127
13	0.0	0.0	0.0	chr12	94459808	94459824	(38815485)	+	(GGC)n	Simple_repeat	1	17	(0)	915224
12	19.3	8.5	0.0	chr12	94460065	94460111	(38815198)	+	(GCGGCA)n	Simple_repeat	1	51	(0)	915225
187	35.9	6.4	7.5	chr12	95551438	95551690	(37723619)	+	L2b	LINE/L2	3107	3356	(19)	917440
15	17.6	6.7	0.0	chr12	95859079	95859123	(37416186)	+	GA-rich	Low_complexity	1	48	(0)	918026
645	1.3	0.0	0.0	chr12	96036021	96036095	(37239214)	+	tRNA-Asp-GAY	tRNA	1	75	(0)	918300
26296	4.6	0.2	0.1	chr12	97603218	97609364	(35665945)	C	L1PA4	LINE/L1	(3)	6152	1	920925
22956	8.2	1.1	0.2	chr12	99237940	99244029	(34031280)	+	L1PA6	LINE/L1	16	6152	(2)	923614
23417	10.4	1.4	0.9	chr12	99722719	99728940	(33546369)	+	L1PA8A	LINE/L1	4	6262	(184)	924253
17	28.4	0.0	1.8	chr12	100573651	100573707	(32701602)	+	(GGC)n	Simple_repeat	1	57	(0)	925852
14	18.4	0.0	0.0	chr12	102120190	102120220	(31155089)	+	(GCG)n	Simple_repeat	1	31	(0)	928585
34	24.0	3.4	5.2	chr12	103841045	103841158	(29434151)	+	(CCG)n	Simple_repeat	1	161	(0)	931388
16	22.2	3.9	1.9	chr12	103841159	103841209	(29434100)	+	(CTG)n	Simple_repeat	1	53	(0)	931389
12	10.6	9.1	4.2	chr12	105236161	105236204	(28039105)	+	(GGCC)n	Simple_repeat	1	48	(0)	934031
23	10.7	2.5	0.0	chr12	106139178	106139217	(27136092)	+	(GCG)n	Simple_repeat	1	41	(0)	935685
2160	11.1	0.0	0.0	chr12	107225211	107225532	(26049777)	+	AluSc8	SINE/Alu	1	311	(0)	937667
704	15.4	0.0	0.0	chr12	107225533	107225636	(26049673)	+	AluJr	SINE/Alu	134	237	(75)	937668
24	7.5	2.2	4.3	chr12	107225727	107225772	(26049537)	+	(GGA)n	Simple_repeat	1	47	(0)	937669
304	25.5	13.7	0.7	chr12	107635509	107635654	(25639655)	C	LTR79	LTR/ERVL	(77)	450	283	938585
477	23.7	10.9	4.3	chr12	108769247	108769409	(24505900)	+	MIRb	SINE/MIR	46	220	(48)	940964
2072	11.0	1.3	4.5	chr12	108769444	108769753	(24505556)	C	AluSz	SINE/Alu	(11)	301	2	940965
26	6.3	0.0	0.0	chr12	109714197	109714230	(23561079)	+	(CCG)n	Simple_repeat	1	34	(0)	943153
224	18.2	0.0	10.2	chr12	109736645	109736693	(23538616)	+	L2b	LINE/L2	3309	3352	(23)	943197
16	16.0	2.2	4.3	chr12	110281725	110281770	(22993539)	+	(GAGGC)n	Simple_repeat	1	47	(0)	944415
584	30.4	2.9	2.4	chr12	110936207	110936412	(22338897)	+	L2a	LINE/L2	3219	3425	(1)	945946
1657	12.0	14.7	6.9	chr12	110936432	110936780	(22338529)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	945947
475	28.4	4.1	2.1	chr12	111404740	111404883	(21870426)	C	MIRb	SINE/MIR	(22)	246	100	947028
13	28.3	1.6	3.1	chr12	111766730	111766792	(21508517)	+	G-rich	Low_complexity	1	64	(0)	947852
13	19.0	0.0	5.0	chr12	111766958	111766997	(21508312)	+	(GCCCGCT)n	Simple_repeat	1	40	(0)	947853
26485	3.8	0.1	0.1	chr12	111829163	111835315	(21439994)	C	L1PA3	LINE/L1	(2)	6153	1	947990
217	33.4	11.3	0.8	chr12	113065218	113065362	(20209947)	C	MIR1_Amn	SINE/MIR	(24)	206	49	950707
1999	11.0	3.1	0.4	chr12	113154004	113154284	(20121025)	+	AluJr	SINE/Alu	1	289	(23)	950922
15	11.1	7.3	2.3	chr12	113154486	113154526	(20120783)	+	(GAGCGC)n	Simple_repeat	1	44	(0)	950923
560	17.6	7.1	2.2	chr12	116384868	116385001	(16890308)	+	MER96	DNA/hAT-Tip100	33	173	(2)	957897
18	7.2	3.3	0.0	chr12	116534059	116534088	(16741221)	+	(CTC)n	Simple_repeat	1	31	(0)	958310
457	30.3	10.6	0.0	chr12	116687776	116687953	(16587356)	C	MIRb	SINE/MIR	(31)	237	39	958701
495	23.9	12.4	4.7	chr12	116910536	116910750	(16364559)	+	L2a	LINE/L2	3192	3425	(1)	959264
14	14.6	0.0	3.1	chr12	116910931	116910962	(16364347)	+	(GCG)n	Simple_repeat	1	32	(0)	959265
15	16.6	0.0	2.8	chr12	116911069	116911104	(16364205)	+	(GGCGCA)n	Simple_repeat	1	36	(0)	959266
13	14.2	3.2	0.0	chr12	117052752	117052782	(16222527)	+	(CCCACA)n	Simple_repeat	1	32	(0)	959454
205	31.3	5.8	2.7	chr12	117052870	117053053	(16222256)	+	L2c	LINE/L2	2787	2976	(443)	959455
12	5.5	0.0	0.0	chr12	117969131	117969149	(15306160)	+	(GGA)n	Simple_repeat	1	19	(0)	961514
19	21.7	1.8	1.8	chr12	117969235	117969289	(15306020)	+	(GCGA)n	Simple_repeat	1	56	(0)	961515
18	22.1	1.6	4.7	chr12	118981397	118981459	(14293850)	+	GA-rich	Low_complexity	1	64	(0)	963748
35	5.0	0.0	0.0	chr12	119156612	119156652	(14118657)	+	(CCGGAG)n	Simple_repeat	1	41	(0)	964111
48	5.5	0.0	0.0	chr12	119156703	119156759	(14118550)	+	(AGCCGG)n	Simple_repeat	1	57	(0)	964112
17	20.4	2.1	2.1	chr12	119989948	119989994	(13285315)	+	(CCG)n	Simple_repeat	1	48	(0)	966005
12	25.7	0.0	0.0	chr12	119990018	119990054	(13285255)	+	(GGAGCT)n	Simple_repeat	1	37	(0)	966006
386	19.2	4.5	4.2	chr12	120230893	120231012	(13044297)	+	L2a	LINE/L2	3200	3383	(43)	966485
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
1329	1.4	0.0	0.0	chr12	120293094	120293237	(12982072)	C	U4	snRNA	(1)	144	1	966634
2162	7.9	2.4	0.0	chr12	120584161	120584440	(12690869)	C	AluSx1	SINE/Alu	(24)	288	2	967438
13	12.7	0.0	0.0	chr12	121578636	121578661	(11696648)	+	(CCCAC)n	Simple_repeat	1	26	(0)	969715
23	9.4	0.0	7.5	chr12	122226368	122226420	(11048889)	+	(GGCGG)n	Simple_repeat	1	53	(0)	971354
829	10.4	0.0	7.5	chr12	123233964	123234097	(10041212)	C	FLAM_C	SINE/Alu	(15)	128	5	973592
2007	10.2	0.3	1.4	chr12	123711762	123712046	(9563263)	+	AluSx	SINE/Alu	1	282	(30)	974779
22	3.4	0.0	5.9	chr12	123712062	123712095	(9563214)	+	(CA)n	Simple_repeat	1	34	(0)	974780
370	23.7	0.7	6.1	chr12	124131066	124131108	(9144201)	C	MER112	DNA/hAT-Charlie	(41)	220	179	975519
508	26.4	15.3	1.2	chr12	124131109	124131361	(9143948)	+	MamRep38	DNA/hAT	1	295	(0)	975520
370	23.7	0.7	6.1	chr12	124131362	124131407	(9143902)	C	MER112	DNA/hAT-Charlie	(83)	178	135	975519
3121	17.0	5.1	7.8	chr12	124131408	124132116	(9143193)	+	LTR8	LTR/ERV1	1	689	(2)	975521
226	33.6	6.3	0.8	chr12	124321230	124321349	(8953960)	C	MIRb	SINE/MIR	(117)	151	25	975884
321	29.8	2.5	1.8	chr12	125194887	125195037	(8080272)	+	Charlie8	DNA/hAT-Charlie	15	175	(155)	977749
203	12.5	0.0	0.0	chr12	125195046	125195077	(8080232)	+	MIRc	SINE/MIR	117	148	(120)	977744
1304	24.3	5.8	6.4	chr12	125195166	125195394	(8079915)	C	L2a	LINE/L2	(17)	3409	3185	977750
210	27.9	6.2	0.0	chr12	131724774	131724834	(1550475)	+	L3	LINE/CR1	3566	3630	(469)	988499
329	25.4	9.8	0.0	chr12	131725016	131725125	(1550184)	C	Charlie4z	DNA/hAT-Charlie	(36)	131	10	988500
2207	8.3	1.3	3.2	chr12	131928376	131928687	(1346622)	+	AluSc	SINE/Alu	1	306	(3)	988828
307	16.8	0.0	3.8	chr12	131928703	131928791	(1346518)	+	AluJb	SINE/Alu	104	188	(114)	988829
237	33.5	9.8	3.0	chr12	132083857	132084056	(1191253)	+	L2b	LINE/L2	3109	3323	(52)	989054
1396	25.9	13.1	0.9	chr12	132283421	132283950	(991359)	+	MER77	LTR/ERVL	1	604	(0)	989294
12	13.9	0.0	8.1	chr12	132353564	132353600	(921709)	+	(AGCCC)n	Simple_repeat	1	37	(0)	989366
649	21.9	14.8	0.4	chr12	132437065	132437307	(838002)	C	MLT1A1	LTR/ERVL-MaLR	(36)	372	89	989454
215	34.1	5.8	0.0	chr12	132437337	132437418	(837891)	+	L2b	LINE/L2	3288	3374	(1)	989455
86	16.2	2.8	4.1	chr12	132437435	132437647	(837662)	+	GA-rich	Low_complexity	1	219	(0)	989456
11	14.5	7.5	2.3	chr12	132710536	132710575	(564734)	+	(CTCCGGC)n	Simple_repeat	1	43	(0)	989824
16	15.3	2.0	6.0	chr13	20127770	20127818	(94236510)	+	(TGAGG)n	Simple_repeat	1	50	(0)	993808
18	0.0	0.0	0.0	chr13	24615702	24615721	(89748607)	+	(A)n	Simple_repeat	1	20	(0)	1000522
14	15.0	10.9	1.6	chr13	26186524	26186578	(88177750)	+	(GCGCACA)n	Simple_repeat	1	61	(0)	1002856
18	28.0	0.0	1.6	chr13	28138293	28138354	(86225974)	+	(CCTGCC)n	Simple_repeat	1	62	(0)	1006216
2186	17.9	4.0	2.2	chr13	28161203	28161618	(86202710)	C	MLT1C	LTR/ERVL-MaLR	(43)	424	1	1006273
370	23.4	10.3	9.1	chr13	30674562	30674782	(83689546)	C	MER106A	DNA/hAT-Charlie	(11)	225	2	1010175
28323	1.4	0.3	0.1	chr13	36008230	36014237	(78350091)	C	L1PA2	LINE/L1	(7)	6148	124	1017941
14	10.0	6.2	0.0	chr13	37000762	37000793	(77363535)	+	(GCGCAG)n	Simple_repeat	1	34	(0)	1019397
12	28.3	1.7	3.3	chr13	37059689	37059747	(77304581)	+	(GGCG)n	Simple_repeat	1	60	(0)	1019478
12	22.5	2.3	2.3	chr13	37059731	37059773	(77304555)	+	(GGAGCCT)n	Simple_repeat	1	44	(0)	1019479
12	12.4	5.1	4.9	chr13	40666130	40666168	(73698160)	+	(GGCAGC)n	Simple_repeat	1	41	(0)	1024470
2302	7.6	0.0	2.4	chr13	40680241	40680530	(73683798)	C	AluSz	SINE/Alu	(29)	283	1	1024501
469	19.6	22.0	5.6	chr13	40680531	40680692	(73683636)	C	MIR	SINE/MIR	(47)	215	2	1024499
346	21.9	0.0	0.0	chr13	41060737	41060809	(73303519)	C	tRNA-Glu-GAG_	tRNA	(2)	73	1	1025161
13	10.4	6.2	0.0	chr13	41060893	41060914	(73303414)	+	(CTG)n	Simple_repeat	1	24	(0)	1025162
35	0.0	0.0	0.0	chr13	41060915	41060946	(73303382)	+	(GCC)n	Simple_repeat	1	32	(0)	1025163
14	17.6	2.5	2.4	chr13	41457396	41457435	(72906893)	+	G-rich	Low_complexity	1	41	(0)	1025878
18	10.0	4.1	5.9	chr13	41457466	41457515	(72906813)	+	(GCCCCG)n	Simple_repeat	1	49	(0)	1025879
13	21.9	0.0	2.6	chr13	41458265	41458303	(72906025)	+	(GCCCCG)n	Simple_repeat	1	39	(0)	1025882
12	25.7	0.0	0.0	chr13	41458427	41458463	(72905865)	+	(CAGCGA)n	Simple_repeat	1	37	(0)	1025883
186	13.3	0.0	0.0	chr13	41458540	41458569	(72905759)	+	MIR3	SINE/MIR	117	146	(62)	1025884
11	23.8	8.5	0.0	chr13	43785834	43785892	(70578436)	+	(GTGGCC)n	Simple_repeat	1	64	(0)	1029331
11	27.6	0.0	0.0	chr13	43786271	43786309	(70578019)	+	G-rich	Low_complexity	1	39	(0)	1029332
63	13.9	4.1	0.0	chr13	43879726	43879847	(70484481)	+	(CGAGG)n	Simple_repeat	1	127	(0)	1029464
13	13.2	0.0	0.0	chr13	44576031	44576055	(69788273)	+	(GCG)n	Simple_repeat	1	25	(0)	1030512
13	5.3	0.0	0.0	chr13	44576189	44576208	(69788120)	+	(TCC)n	Simple_repeat	1	20	(0)	1030513
23	19.9	2.0	8.7	chr13	44577328	44577429	(69786899)	+	GA-rich	Low_complexity	1	104	(0)	1030517
75	15.5	4.7	4.1	chr13	49996819	49997027	(64367301)	+	G-rich	Low_complexity	1	210	(0)	1039473
30	11.8	8.0	1.2	chr13	51222279	51222353	(63141975)	+	(GGCGCG)n	Simple_repeat	1	81	(0)	1041254
2226	11.9	0.0	0.7	chr13	51243526	51243835	(63120493)	C	AluSq2	SINE/Alu	(5)	308	1	1041280
14	28.3	0.0	5.6	chr13	51452898	51452968	(62911360)	+	(GGAGTGG)n	Simple_repeat	1	71	(0)	1041603
229	22.1	0.8	3.2	chr13	52159787	52159872	(62204456)	+	MIRc	SINE/MIR	16	102	(166)	1042687
621	25.0	11.8	6.3	chr13	52159874	52160176	(62204152)	+	MLT1D	LTR/ERVL-MaLR	1	322	(183)	1042688
16	26.2	1.8	1.8	chr13	52847304	52847359	(61516969)	+	(GCG)n	Simple_repeat	1	57	(0)	1043780
1441	9.3	0.4	13.6	chr13	52968370	52968563	(61395765)	+	L1PB2	LINE/L1	5913	6087	(64)	1043977
41	2.4	0.0	0.0	chr13	53201091	53201132	(61163196)	+	(CGC)n	Simple_repeat	1	42	(0)	1044310
8039	17.0	6.5	12.1	chr13	60258260	60258962	(54105366)	C	L1MD1	LINE/L1	(2793)	3744	3306	1053243
27640	2.9	0.0	0.2	chr13	72610247	72616287	(41748041)	+	L1PA3	LINE/L1	124	6155	(0)	1069054
18	14.6	2.6	0.0	chr13	72727555	72727592	(41636736)	+	(CGC)n	Simple_repeat	1	39	(0)	1069242
13	10.8	3.1	3.0	chr13	74575874	74575905	(39788423)	+	(CCGGC)n	Simple_repeat	1	33	(0)	1072129
12	25.8	1.9	3.6	chr13	76992139	76992192	(37372136)	+	(GGCGCG)n	Simple_repeat	1	55	(0)	1075557
19	24.8	0.0	0.0	chr13	77327025	77327070	(37037258)	+	(GCC)n	Simple_repeat	1	46	(0)	1076034
20	25.9	1.4	2.7	chr13	78603413	78603484	(35760844)	+	(GCT)n	Simple_repeat	1	73	(0)	1077764
14742	2.9	0.3	0.0	chr13	80151906	80153647	(34210681)	+	L1PA2	LINE/L1	128	1874	(4281)	1079867
36	2.7	0.0	0.0	chr13	80341176	80341213	(34023115)	+	(GGA)n	Simple_repeat	1	38	(0)	1080204
27841	1.9	0.1	0.0	chr13	85123205	85129221	(29235107)	+	L1PA2	LINE/L1	135	6155	(0)	1086130
2271	18.4	3.2	1.4	chr13	86881614	86882048	(27482280)	+	MER87B	LTR/ERV1	1	443	(66)	1088262
37	23.5	0.0	1.1	chr13	87677746	87677837	(26686491)	+	(CAG)n	Simple_repeat	1	92	(0)	1089330
1759	19.5	10.2	6.0	chr13	88461236	88461721	(25902607)	C	MER67D	LTR/ERV1	(5)	509	1	1090350
1716	20.1	7.4	2.4	chr13	88461722	88462094	(25902234)	C	MLT1C	LTR/ERVL-MaLR	(48)	419	27	1090349
27552	2.4	0.1	0.2	chr13	89087886	89093918	(25270410)	+	L1PA2	LINE/L1	124	6155	(0)	1091141
27562	2.7	0.3	0.0	chr13	92752476	92758488	(21605840)	+	L1PA3	LINE/L1	124	6155	(0)	1095980
1225	24.1	6.4	5.2	chr13	93233868	93234391	(21129937)	+	LTR55	LTR/ERVL?	16	546	(2)	1096618
238	30.6	21.9	1.5	chr13	93234394	93234599	(21129729)	C	L2a	LINE/L2	(531)	2888	2629	1096616
19	26.9	1.6	0.0	chr13	94712582	94712643	(19651685)	+	(AGGTGG)n	Simple_repeat	1	63	(0)	1098777
16	24.3	1.8	1.8	chr13	95644635	95644689	(18719639)	+	(CCCCTCC)n	Simple_repeat	1	56	(0)	1100477
12	12.8	5.6	2.6	chr13	98142495	98142530	(16221798)	+	G-rich	Low_complexity	1	38	(0)	1104172
14	14.3	8.3	1.9	chr13	98142728	98142775	(16221553)	+	(CCCGCTCT)n	Simple_repeat	1	52	(0)	1104173
3177	18.9	8.1	0.9	chr13	98327734	98328401	(16035927)	C	MER72	LTR/ERV1	(0)	722	3	1104497
53	0.0	0.0	0.0	chr13	99957947	99957991	(14406337)	+	(CA)n	Simple_repeat	1	45	(0)	1107114
25	18.5	1.8	0.0	chr13	99970035	99970109	(14394219)	+	(GCG)n	Simple_repeat	1	76	(0)	1107124
41	2.4	0.0	0.0	chr13	99970408	99970449	(14393879)	+	(GGC)n	Simple_repeat	1	42	(0)	1107125
13	16.6	0.0	0.0	chr13	99970642	99970668	(14393660)	+	(GCC)n	Simple_repeat	1	27	(0)	1107126
12	9.9	2.6	7.7	chr13	99972059	99972096	(14392232)	+	G-rich	Low_complexity	1	39	(0)	1107129
18	20.9	3.0	4.4	chr13	99980757	99980822	(14383506)	+	GA-rich	Low_complexity	1	68	(0)	1107132
25	22.4	1.3	3.8	chr13	99981084	99981162	(14383166)	+	(CCTCCC)n	Simple_repeat	1	80	(0)	1107133
20	0.0	0.0	8.6	chr13	99990015	99990049	(14374279)	+	(TTG)n	Simple_repeat	1	35	(0)	1107147
12	23.4	4.6	4.4	chr13	100089149	100089213	(14275115)	+	(CGCTGG)n	Simple_repeat	1	68	(0)	1107378
12	15.3	5.3	2.5	chr13	100588762	100588799	(13775529)	+	G-rich	Low_complexity	1	40	(0)	1108183
815	29.4	7.3	4.7	chr13	103436100	103436566	(10927762)	C	LTR16B1	LTR/ERVL	(0)	480	1	1112168
14	16.5	2.9	0.0	chr13	110712418	110712451	(3651877)	+	(GGCCGA)n	Simple_repeat	1	35	(0)	1121636
13	17.6	0.0	2.9	chr13	110914896	110914929	(3449399)	+	(GCCCGC)n	Simple_repeat	1	34	(0)	1121925
1112	20.4	2.5	0.4	chr13	110993660	110993895	(3370433)	C	L1MD1	LINE/L1	(0)	6242	6002	1122023
572	12.9	0.0	0.0	chr13	110993901	110993993	(3370335)	+	L1PA10	LINE/L1	420	581	(5902)	1122024
23849	9.8	1.0	0.3	chr13	110993990	110999707	(3364621)	+	L1PA10	LINE/L1	725	6481	(2)	1122024
17	12.7	0.0	0.0	chr13	112588396	112588421	(1775907)	+	(GT)n	Simple_repeat	1	26	(0)	1123662
38	19.0	3.8	5.1	chr13	112894203	112894334	(1469994)	+	(CGCCC)n	Simple_repeat	1	137	(0)	1124019
13	15.6	2.0	7.8	chr13	113296931	113296980	(1067348)	+	(CTTCCT)n	Simple_repeat	1	51	(0)	1124474
23	23.3	1.8	0.0	chr13	113860119	113860173	(504155)	+	GA-rich	Low_complexity	1	56	(0)	1125060
1563	16.7	4.0	6.8	chr13	114226969	114227279	(137049)	+	AluJb	SINE/Alu	1	302	(10)	1125371
12	24.3	0.0	4.3	chr13	114234973	114235019	(129309)	+	G-rich	Low_complexity	1	47	(0)	1125385
20	5.5	7.9	0.0	chr13	114281896	114281934	(82394)	+	(GAGGG)n	Simple_repeat	1	42	(0)	1125454
14	23.5	0.0	5.5	chr14	21025076	21025130	(86018588)	+	(CCCGC)n	Simple_repeat	1	55	(0)	1128972
20	21.2	3.5	5.7	chr14	21070606	21070690	(85973028)	+	(TCC)n	Simple_repeat	1	88	(0)	1129044
12	8.1	3.6	3.5	chr14	21070690	21070717	(85973001)	+	(CTGTC)n	Simple_repeat	1	29	(0)	1129045
25	22.4	2.5	2.4	chr14	21092542	21092622	(85951096)	+	(GGCTGA)n	Simple_repeat	1	83	(0)	1129071
23	17.2	1.9	0.0	chr14	21092584	21092635	(85951083)	+	(GGCGGA)n	Simple_repeat	1	53	(0)	1129072
14	25.2	1.8	3.6	chr14	21526253	21526307	(85517411)	+	(CGG)n	Simple_repeat	1	56	(0)	1129925
12	20.6	0.0	11.4	chr14	21526387	21526456	(85517262)	+	G-rich	Low_complexity	1	70	(0)	1129926
408	27.3	13.4	4.7	chr14	21557524	21557692	(85486026)	+	UCON105	Unknown	79	264	(9)	1130008
12531	10.3	1.8	4.3	chr14	22685727	22689250	(84354468)	+	L1P2	LINE/L1	6	3564	(2897)	1131518
13	19.4	0.0	2.7	chr14	22982543	22982579	(84061139)	+	(CGCCCCC)n	Simple_repeat	1	37	(0)	1132084
15	16.9	4.0	3.9	chr14	23183710	23183759	(83859959)	+	(CCCTCCT)n	Simple_repeat	1	52	(0)	1132424
36	16.6	1.4	0.0	chr14	23306778	23306847	(83736871)	+	(CCCT)n	Simple_repeat	1	71	(0)	1132675
16	11.1	4.7	4.4	chr14	23366320	23366362	(83677356)	+	GA-rich	Low_complexity	1	45	(0)	1132772
14	26.6	3.7	0.0	chr14	23366437	23366499	(83677219)	+	(CCCCGT)n	Simple_repeat	1	65	(0)	1132773
14	20.2	0.0	0.0	chr14	23483645	23483678	(83560040)	+	(CTCT)n	Simple_repeat	1	34	(0)	1132924
12	19.5	4.7	2.2	chr14	23539160	23539202	(83504516)	+	(GATGAA)n	Simple_repeat	1	45	(0)	1133006
17	13.0	7.4	3.5	chr14	23551167	23551180	(83492538)	+	(CCGTC)n	Simple_repeat	1	32	(26)	1133020
13	18.2	0.0	0.0	chr14	23551181	23551211	(83492507)	+	(CCCCTC)n	Simple_repeat	1	31	(0)	1133021
17	13.0	7.4	3.5	chr14	23551212	23551220	(83492498)	+	(CCGTC)n	Simple_repeat	33	58	(0)	1133020
13	26.5	2.2	0.0	chr14	24442011	24442055	(82601663)	+	GA-rich	Low_complexity	1	46	(0)	1134265
12	20.4	0.0	6.7	chr14	24442282	24442326	(82601392)	+	(GCCCC)n	Simple_repeat	1	45	(0)	1134266
27401	2.7	0.2	0.2	chr14	28312503	28318523	(78725195)	C	L1PA2	LINE/L1	(0)	6155	130	1139105
20678	11.4	3.9	2.3	chr14	29022833	29029502	(78014216)	C	L1PA5	LINE/L1	(0)	6154	8	1140008
12	18.1	0.0	3.0	chr14	30875362	30875394	(76168324)	+	(CCAGCC)n	Simple_repeat	1	33	(0)	1142477
205	21.9	1.5	9.9	chr14	31208260	31208330	(75835388)	C	MIRb	SINE/MIR	(82)	186	122	1143147
724	24.7	7.6	2.3	chr14	31934596	31934856	(75108862)	C	MIR	SINE/MIR	(1)	267	1	1144401
340	32.9	12.5	2.3	chr14	31934857	31935175	(75108543)	C	L3	LINE/CR1	(864)	3235	2877	1144380
19	11.1	3.6	6.9	chr14	34630043	34630098	(72413620)	+	(CCCGCG)n	Simple_repeat	1	58	(0)	1148281
5154	11.1	5.0	3.4	chr14	34693173	34693995	(72349723)	+	LTR1A2	LTR/ERV1	1	837	(0)	1148450
13	17.6	0.0	2.9	chr14	34873685	34873718	(72170000)	+	(CCCTTC)n	Simple_repeat	1	34	(0)	1148820
3548	4.7	0.7	0.2	chr14	38190638	38191083	(68852635)	+	LTR7	LTR/ERV1	1	448	(2)	1153970
19525	8.9	5.3	4.2	chr14	38191086	38194338	(68849380)	+	HERVH-int	LTR/ERV1	1	3290	(4423)	1153970
25606	3.7	0.3	0.2	chr14	39017172	39023327	(68020391)	+	L1PA4	LINE/L1	2	6152	(3)	1154958
17041	5.0	1.8	0.5	chr14	41908984	41911704	(65132014)	C	L1PA3	LINE/L1	(3384)	2762	1	1158682
26824	4.3	0.0	0.4	chr14	45545717	45551885	(61491833)	C	L1PA3	LINE/L1	(0)	6155	7	1163280
27561	2.8	0.1	0.1	chr14	45883228	45889258	(61154460)	C	L1PA2	LINE/L1	(2)	6153	125	1163672
24783	7.4	0.3	0.1	chr14	48570231	48576385	(58467333)	C	L1PA6	LINE/L1	(0)	6154	4	1166887
13	16.3	6.5	6.1	chr14	50668403	50668464	(56375254)	+	G-rich	Low_complexity	1	66	(0)	1170320
742	24.9	0.5	4.5	chr14	50892235	50892436	(56151282)	C	LTR16A1	LTR/ERVL	(1)	455	262	1170643
1841	23.5	6.4	1.7	chr14	50892563	50893155	(56150563)	C	L1ME3B	LINE/L1	(2907)	3239	2617	1170641
14	24.7	0.0	0.0	chr14	52791516	52791554	(54252164)	+	(CACCGC)n	Simple_repeat	1	39	(0)	1173517
39	22.3	3.6	4.2	chr14	53956783	53956921	(53086797)	+	(CTCC)n	Simple_repeat	1	144	(0)	1175257
1887	18.1	3.0	1.0	chr14	54362125	54362477	(52681241)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1175819
15	13.4	2.9	2.8	chr14	55051679	55051713	(51992005)	+	(GCT)n	Simple_repeat	1	36	(0)	1176946
670	24.9	11.5	7.3	chr14	56847187	56847502	(50196216)	+	MamRep605	LTR?	1	331	(518)	1179826
501	13.3	1.1	1.1	chr14	56894821	56894911	(50148807)	C	MER5A1	DNA/hAT-Charlie	(18)	148	58	1179918
35	21.3	5.3	3.6	chr14	60249116	60249248	(46794470)	+	(GCG)n	Simple_repeat	1	140	(0)	1184789
25	21.0	5.5	3.1	chr14	60724092	60724182	(46319536)	+	(CCTC)n	Simple_repeat	1	96	(0)	1185459
30	7.5	0.0	0.0	chr14	61188412	61188453	(45855265)	+	(GGCTCC)n	Simple_repeat	1	42	(0)	1186116
8687	4.1	1.0	0.8	chr14	62781031	62782098	(44261620)	C	MER11C	LTR/ERVK	(0)	1071	1	1188275
12	12.4	10.9	2.0	chr14	63542635	63542680	(43501038)	+	(CGCTCC)n	Simple_repeat	1	51	(0)	1189432
15097	13.7	3.1	1.4	chr14	64058781	64061215	(42982503)	C	L1M1	LINE/L1	(5043)	2522	18	1190610
71	0.0	0.0	0.0	chr14	64704385	64704447	(42339271)	+	(CTCCCTCG)n	Simple_repeat	1	63	(0)	1191799
292	29.8	3.9	3.9	chr14	64715459	64715587	(42328131)	+	MIRc	SINE/MIR	79	207	(61)	1191815
12	11.5	3.3	3.2	chr14	67241593	67241622	(39802096)	+	(GCGG)n	Simple_repeat	1	31	(0)	1195682
995	20.1	17.1	2.2	chr14	68639147	68639461	(38404257)	C	MLT1J1	LTR/ERVL-MaLR	(4)	440	77	1198005
14	22.1	2.8	6.8	chr14	68977839	68977910	(38065808)	+	G-rich	Low_complexity	1	74	(0)	1198593
2513	4.7	0.3	4.4	chr14	70359990	70360306	(36683412)	+	AluSq10	SINE/Alu	1	304	(9)	1201067
33	3.1	0.0	0.0	chr14	70641588	70641620	(36402098)	+	(CA)n	Simple_repeat	1	33	(0)	1201466
12	13.5	0.0	7.9	chr14	70641622	70641659	(36402059)	+	(CCCCTA)n	Simple_repeat	1	38	(0)	1201467
16	19.6	0.0	5.8	chr14	70641859	70641910	(36401808)	+	G-rich	Low_complexity	1	52	(0)	1201468
23	21.0	3.7	3.5	chr14	70641911	70641938	(36401780)	+	(GCGGAG)n	Simple_repeat	3	85	(0)	1201469
13	11.0	0.0	6.1	chr14	71320402	71320434	(35723284)	+	G-rich	Low_complexity	1	33	(0)	1202618
14	19.5	0.0	2.7	chr14	71320464	71320500	(35723218)	+	(GTGA)n	Simple_repeat	1	37	(0)	1202619
14	22.0	3.6	3.5	chr14	71320800	71320855	(35722863)	+	G-rich	Low_complexity	1	58	(0)	1202620
17	7.5	0.0	3.3	chr14	72804423	72804452	(34239266)	+	(AAC)n	Simple_repeat	1	30	(0)	1204845
13	24.5	0.0	2.2	chr14	73058803	73058847	(33984871)	+	G-rich	Low_complexity	1	45	(0)	1205429
23	15.6	0.0	0.0	chr14	74348853	74348896	(32694822)	+	(CCCCAC)n	Simple_repeat	1	44	(0)	1208335
2191	13.8	0.0	0.0	chr14	75223467	75223763	(31819955)	C	AluSz	SINE/Alu	(15)	297	1	1209996
1149	24.7	10.1	4.8	chr14	75223766	75224258	(31819460)	+	L2a	LINE/L2	2792	3335	(91)	1209993
14	20.1	2.0	4.0	chr14	76956446	76956494	(30087224)	+	(CCCCT)n	Simple_repeat	1	50	(0)	1213290
12	22.2	6.4	0.0	chr14	76956643	76956689	(30087029)	+	(GCCGGCC)n	Simple_repeat	1	50	(0)	1213291
11	18.9	5.8	6.8	chr14	76962137	76962144	(30081574)	+	(CTCACT)n	Simple_repeat	1	70	(0)	1213304
15	17.0	5.2	4.9	chr14	76962145	76962202	(30081516)	+	(TCACTT)n	Simple_repeat	1	61	(0)	1213305
13	23.9	0.0	0.0	chr14	77026836	77026870	(30016848)	+	(CGA)n	Simple_repeat	1	35	(0)	1213463
12	8.0	0.0	9.4	chr14	77028867	77028898	(30014820)	+	(CCCCT)n	Simple_repeat	1	32	(0)	1213467
303	28.1	1.2	0.0	chr14	77208698	77208779	(29834939)	+	MIR	SINE/MIR	180	262	(0)	1213826
20	14.6	0.0	0.0	chr14	77980957	77980994	(29062724)	+	(TGCGTG)n	Simple_repeat	1	38	(0)	1215412
15	29.0	1.9	1.9	chr14	78029783	78029835	(29013883)	+	(TC)n	Simple_repeat	1	54	(0)	1215507
26545	2.4	0.1	0.1	chr14	81114166	81120190	(25923528)	+	L1PA3	LINE/L1	124	6153	(2)	1220142
232	30.1	7.6	2.7	chr14	82075653	82075727	(24967991)	C	MER91A	DNA/hAT-Tip100	(0)	196	118	1221608
27134	4.2	0.1	0.2	chr14	86312233	86318377	(20725341)	+	L1PA3	LINE/L1	9	6152	(3)	1227413
1143	11.2	0.7	0.0	chr14	88551689	88551840	(18491878)	C	FRAM	SINE/Alu	(23)	153	1	1230604
2025	19.3	4.8	3.9	chr14	89293310	89293741	(17749977)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	30	1231809
2201	10.2	0.0	1.7	chr14	89563860	89564154	(17479564)	C	AluSx1	SINE/Alu	(22)	290	1	1232312
975	28.0	5.8	2.8	chr14	89773560	89773959	(17269759)	+	MLT2F	LTR/ERVL	1	413	(250)	1232705
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
378	34.4	12.8	4.5	chr14	90495027	90495361	(16548357)	C	L2c	LINE/L2	(0)	3387	3021	1234032
745	27.8	10.1	0.8	chr14	90510008	90510250	(16533468)	+	MIRb	SINE/MIR	1	268	(0)	1234064
20	27.5	0.0	3.0	chr14	92748493	92748559	(14295159)	+	(GGC)n	Simple_repeat	1	67	(0)	1238154
12	19.2	3.2	7.8	chr14	93430409	93430470	(13613248)	+	(CCTCCG)n	Simple_repeat	1	64	(0)	1239454
17	16.7	2.4	2.3	chr14	93787661	93787702	(13256016)	+	(GCA)n	Simple_repeat	1	43	(0)	1240007
268	25.0	2.9	0.0	chr14	94486116	94486183	(12557535)	+	MIRc	SINE/MIR	81	150	(118)	1241215
16	20.1	0.0	5.9	chr14	95157310	95157360	(11886358)	+	(GCC)n	Simple_repeat	1	51	(0)	1242512
44	0.0	0.0	0.0	chr14	95319304	95319341	(11724377)	+	(CA)n	Simple_repeat	1	38	(0)	1242775
255	30.9	17.6	5.7	chr14	95895653	95896054	(11147664)	+	L2a	LINE/L2	2916	3426	(0)	1243902
240	30.9	9.6	7.5	chr14	95896058	95896190	(11147528)	C	MIRc	SINE/MIR	(130)	138	3	1243903
634	33.2	6.7	1.2	chr14	95935101	95935341	(11108377)	+	MIRb	SINE/MIR	8	262	(6)	1243966
34	18.2	1.2	3.5	chr14	97366315	97366398	(9677320)	+	(TCTTTTT)n	Simple_repeat	1	85	(0)	1246579
750	21.6	9.8	2.9	chr14	97366825	97367062	(9676656)	+	ORSL	DNA/hAT-Tip100	3	258	(17)	1246580
182	26.0	5.7	0.0	chr14	99230720	99230769	(7812949)	+	L2b	LINE/L2	3299	3351	(24)	1249709
48	15.6	1.1	0.0	chr14	99274710	99274797	(7768921)	+	(CCT)n	Simple_repeat	1	89	(0)	1249761
12	21.7	0.0	0.0	chr14	99571297	99571328	(7472390)	+	(GCCACA)n	Simple_repeat	1	32	(0)	1250214
26	0.0	0.0	0.0	chr14	99571346	99571370	(7472348)	+	(TAA)n	Simple_repeat	1	25	(0)	1250215
27	18.8	0.0	3.1	chr14	99603435	99603498	(7440220)	+	(GCC)n	Simple_repeat	1	64	(0)	1250257
366	32.6	13.3	0.9	chr14	100486864	100487080	(6556638)	C	L1ME4a	LINE/L1	(7)	6117	5870	1251940
12	18.4	5.4	0.0	chr14	102087355	102087391	(4956327)	+	(CCGCCCT)n	Simple_repeat	1	39	(0)	1254195
683	0.0	0.0	0.0	chr14	102317092	102317165	(4726553)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	1254658
188	38.0	1.6	3.2	chr14	103075241	103075365	(3968353)	+	L2c	LINE/L2	3025	3147	(240)	1256157
14	11.7	0.0	3.3	chr14	103075814	103075843	(3967875)	+	(CCGCT)n	Simple_repeat	1	30	(0)	1256158
12	18.8	2.6	2.6	chr14	103075866	103075903	(3967815)	+	(CCGCAG)n	Simple_repeat	1	39	(0)	1256159
18	0.0	0.0	3.9	chr14	103521142	103521167	(3522551)	+	(CCT)n	Simple_repeat	1	26	(0)	1256987
12	11.2	3.2	3.1	chr14	103522181	103522211	(3521507)	+	G-rich	Low_complexity	1	32	(0)	1256989
387	21.6	5.7	3.3	chr14	103607157	103607276	(3436442)	+	MLT1C	LTR/ERVL-MaLR	338	460	(7)	1257143
456	28.3	0.9	0.0	chr14	103921710	103921822	(3121896)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	1257798
229	27.7	6.0	4.7	chr14	104138112	104138259	(2905459)	+	MIR3	SINE/MIR	4	153	(55)	1258137
13	14.7	3.3	0.0	chr14	104149714	104149743	(2893975)	+	(CCTCC)n	Simple_repeat	1	31	(0)	1258142
14	9.9	0.0	10.0	chr14	104149744	104149750	(2893968)	+	(CTCC)n	Simple_repeat	4	40	(0)	1258143
68	18.8	0.0	0.0	chr14	104150111	104150240	(2893478)	+	(CCTCCT)n	Simple_repeat	1	130	(0)	1258144
23	19.6	2.7	3.9	chr14	104604465	104604543	(2439175)	+	(GCGGCAG)n	Simple_repeat	1	78	(0)	1258579
13	26.6	2.9	4.3	chr14	104753024	104753091	(2290627)	+	(CCGCG)n	Simple_repeat	1	70	(0)	1258777
229	16.3	0.0	0.0	chr14	104794260	104794302	(2249416)	+	Plat_L3	LINE/CR1	3515	3557	(29)	1258817
210	36.5	4.0	3.3	chr14	104844036	104844185	(2199533)	+	OldhAT1	DNA/hAT-Ac	2576	2726	(122)	1258913
231	31.2	3.8	0.0	chr14	104844450	104844526	(2199192)	C	MIRb	SINE/MIR	(124)	144	65	1258914
12	17.5	3.1	0.0	chr15	22873427	22873458	(79117731)	+	(CCTCC)n	Simple_repeat	1	33	(0)	1266470
2052	9.3	10.0	0.9	chr15	24898746	24899191	(77091998)	C	LTR14B	LTR/ERVK	(0)	608	1	1269461
2221	12.6	13.8	0.2	chr15	24919447	24919852	(77071337)	C	MER31A	LTR/ERV1	(15)	470	1	1269501
263	18.9	1.9	0.0	chr15	25643145	25643197	(76347992)	C	Charlie23a	DNA/hAT-Charlie	(79)	260	207	1270281
237	32.3	5.9	0.0	chr15	25643265	25643360	(76347829)	C	Charlie23a	DNA/hAT-Charlie	(237)	102	1	1270281
2037	18.6	5.9	1.4	chr15	26234818	26235252	(75755937)	C	L1MD2	LINE/L1	(2)	6357	5902	1271206
1191	23.5	9.8	4.1	chr15	27483091	27483529	(74507660)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	1272682
22642	9.7	3.0	0.7	chr15	27638723	27644454	(74346735)	+	L1PA10	LINE/L1	1813	7398	(743)	1272878
402	28.6	7.5	0.6	chr15	35545733	35545894	(66445295)	+	MER5B	DNA/hAT-Charlie	2	175	(3)	1284508
15	0.0	0.0	0.0	chr15	38251507	38251523	(63739666)	+	(TC)n	Simple_repeat	1	17	(0)	1288010
38	2.8	0.0	0.0	chr15	38251524	38251560	(63739629)	+	(CA)n	Simple_repeat	1	37	(0)	1288011
12	18.4	5.4	0.0	chr15	38251927	38251963	(63739226)	+	(GGAGCAC)n	Simple_repeat	1	39	(0)	1288013
12	20.8	0.0	2.9	chr15	38252257	38252291	(63738898)	+	(GGC)n	Simple_repeat	1	35	(0)	1288014
15	20.6	0.0	6.0	chr15	38564665	38564714	(63426475)	+	(CGC)n	Simple_repeat	1	50	(0)	1288523
531	26.4	8.2	1.0	chr15	39782997	39783199	(62207990)	+	MIRc	SINE/MIR	31	249	(19)	1290164
646	28.4	4.0	0.6	chr15	40039382	40039609	(61951580)	+	MIR	SINE/MIR	28	262	(0)	1290566
12	13.0	8.8	0.0	chr15	40437795	40437828	(61553361)	+	G-rich	Low_complexity	1	37	(0)	1291193
11	23.2	1.6	7.7	chr15	40925943	40926006	(61065183)	+	(CCAGGCC)n	Simple_repeat	1	65	(0)	1292209
617	21.3	13.1	0.3	chr15	41402121	41402288	(60588901)	C	MIR	SINE/MIR	(2)	266	66	1293268
17	22.9	4.3	2.7	chr15	41494396	41494465	(60496724)	+	G-rich	Low_complexity	1	73	(0)	1293496
19	7.2	0.0	0.0	chr15	41564509	41564537	(60426652)	+	(GGGA)n	Simple_repeat	1	29	(0)	1293653
17	17.4	3.0	7.2	chr15	41972413	41972419	(60018770)	+	(GCCC)n	Simple_repeat	1	20	(49)	1294334
14	22.1	4.3	0.0	chr15	41972420	41972466	(60018723)	+	(CGTCCG)n	Simple_repeat	1	49	(0)	1294335
17	17.4	3.0	7.2	chr15	41972467	41972479	(60018710)	+	(GCCC)n	Simple_repeat	21	69	(0)	1294334
13	19.1	0.0	0.0	chr15	42575235	42575264	(59415925)	+	G-rich	Low_complexity	1	30	(0)	1295396
11	28.4	0.0	0.0	chr15	43518552	43518590	(58472599)	+	(GCTGGA)n	Simple_repeat	1	39	(0)	1297154
19	31.9	3.8	0.9	chr15	43746158	43746263	(58244926)	+	(CCCAGC)n	Simple_repeat	1	110	(0)	1297538
15	30.2	0.0	6.6	chr15	43746221	43746311	(58244878)	+	(CCCCGC)n	Simple_repeat	1	91	(0)	1297539
2338	7.5	1.4	0.3	chr15	43826580	43826872	(58164317)	C	AluSq2	SINE/Alu	(17)	296	1	1297708
14	22.5	0.0	2.3	chr15	43826950	43826992	(58164197)	+	(GCCCC)n	Simple_repeat	1	43	(0)	1297709
19	4.0	0.0	0.0	chr15	44537197	44537222	(57453967)	+	(GGC)n	Simple_repeat	1	26	(0)	1299120
24164	10.2	1.0	2.6	chr15	44682791	44685327	(57305862)	+	L1PA7	LINE/L1	1	2547	(3952)	1299388
16	15.0	0.0	0.0	chr15	45186963	45186992	(56804197)	+	GA-rich	Low_complexity	1	30	(0)	1300186
15	18.4	2.7	0.0	chr15	48178231	48178267	(53812922)	+	(CCG)n	Simple_repeat	1	38	(0)	1304453
12	19.9	1.3	11.2	chr15	48178379	48178457	(53812732)	+	(GAGCTGG)n	Simple_repeat	1	80	(0)	1304454
20	16.2	1.9	3.8	chr15	49169870	49169876	(52821313)	+	(AACA)n	Simple_repeat	1	49	(0)	1305903
12	23.9	0.0	2.4	chr15	49169877	49169917	(52821272)	+	A-rich	Low_complexity	1	41	(0)	1305904
13	30.4	4.4	0.0	chr15	51622857	51622924	(50368265)	+	(GAGC)n	Simple_repeat	1	71	(0)	1309765
12	16.3	2.8	2.7	chr15	52019123	52019158	(49972031)	+	G-rich	Low_complexity	1	37	(0)	1310540
27	3.5	0.0	0.0	chr15	52019445	52019474	(49971715)	+	(CGG)n	Simple_repeat	1	30	(0)	1310541
298	32.8	0.0	0.0	chr15	52180117	52180244	(49810945)	C	MIRb	SINE/MIR	(99)	169	42	1310869
20	23.2	0.0	7.4	chr15	52790363	52790443	(49200746)	+	(GCC)n	Simple_repeat	1	81	(0)	1311891
35	9.7	5.8	1.4	chr15	56243300	56243421	(45747768)	+	GA-rich	Low_complexity	1	127	(0)	1316884
21030	11.8	3.7	0.6	chr15	56327427	56332630	(45658559)	+	L1PA2	LINE/L1	9	7572	(2)	1316993
21	12.6	0.0	0.0	chr15	56733492	56733527	(45257662)	+	(GAG)n	Simple_repeat	1	36	(0)	1317505
12	14.1	3.0	2.9	chr15	56733745	56733777	(45257412)	+	(GCCAGG)n	Simple_repeat	1	34	(0)	1317506
12	22.6	4.3	5.6	chr15	58933159	58933227	(43057962)	+	(GCGGTGGC)n	Simple_repeat	1	72	(0)	1321105
25010	5.0	0.2	0.1	chr15	59803403	59809494	(42181695)	+	L1PA4	LINE/L1	52	6154	(1)	1322780
14	4.5	0.0	4.0	chr15	59997380	59997404	(41993785)	+	(CTTT)n	Simple_repeat	1	25	(0)	1323095
33	17.9	0.0	0.0	chr15	59997468	59997526	(41993663)	+	GA-rich	Low_complexity	1	59	(0)	1323096
21921	11.4	1.5	0.9	chr15	61359173	61365571	(40625618)	C	L1PA8A	LINE/L1	(0)	6446	1	1325199
2248	10.6	0.7	0.3	chr15	62914327	62914628	(39076561)	C	AluSc	SINE/Alu	(6)	303	1	1327618
5204	13.4	4.8	2.2	chr15	62914629	62914851	(39076338)	C	MER4D	LTR/ERV1	(692)	211	1	1327617
14	12.1	0.0	3.5	chr15	63833955	63833983	(38157206)	+	(GGC)n	Simple_repeat	1	29	(0)	1329210
14	16.8	4.7	2.2	chr15	63870827	63870869	(38120320)	+	(CTCAGAG)n	Simple_repeat	1	45	(0)	1329297
348	25.9	13.5	2.5	chr15	63870875	63871033	(38120156)	C	MIRc	SINE/MIR	(25)	183	6	1329298
16	17.0	3.4	4.9	chr15	64460651	64460687	(37530502)	+	(GGCGG)n	Simple_repeat	1	34	(0)	1330440
28	3.3	0.0	0.0	chr15	64460688	64460718	(37530471)	+	(GAGCCG)n	Simple_repeat	1	31	(0)	1330441
204	29.0	6.1	5.1	chr15	64700201	64700298	(37290891)	C	MIR3	SINE/MIR	(25)	183	85	1330984
29	2.9	2.9	0.0	chr15	64703227	64703261	(37287928)	+	(GCC)n	Simple_repeat	1	36	(0)	1330988
11	21.0	2.5	2.4	chr15	64807795	64807834	(37183355)	+	(GCCCCT)n	Simple_repeat	1	41	(0)	1331250
12	24.0	0.0	2.4	chr15	64807960	64808000	(37183189)	+	(GAGGCT)n	Simple_repeat	1	41	(0)	1331251
3782	15.7	11.2	1.2	chr15	64811058	64811831	(37179358)	+	MER21B	LTR/ERVL	1	862	(6)	1331259
364	25.8	3.1	1.0	chr15	64893589	64893726	(37097463)	+	MIRc	SINE/MIR	60	209	(59)	1331449
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
16	22.6	3.0	4.3	chr15	65378054	65378060	(36613129)	+	(CCCTCTC)n	Simple_repeat	1	28	(41)	1332492
16	22.7	1.9	1.9	chr15	65378061	65378113	(36613076)	+	(CCCCAGC)n	Simple_repeat	1	54	(0)	1332493
16	22.6	3.0	4.3	chr15	65378114	65378120	(36613069)	+	(CCCTCTC)n	Simple_repeat	29	69	(0)	1332492
223	20.0	9.1	0.0	chr15	65952713	65952772	(36038417)	C	MIRc	SINE/MIR	(92)	170	105	1333685
13	18.3	2.6	2.5	chr15	66386883	66386921	(35604268)	+	(TCCCC)n	Simple_repeat	1	40	(0)	1334597
15	27.0	3.2	5.2	chr15	67033840	67033932	(34957257)	+	(GCCCACC)n	Simple_repeat	1	96	(0)	1335936
366	30.5	15.3	3.7	chr15	67063858	67064075	(34927114)	+	MIRb	SINE/MIR	7	254	(14)	1336012
13	14.3	5.8	5.5	chr15	67914911	67914962	(34076227)	+	(CTTCCAT)n	Simple_repeat	1	55	(0)	1337369
11	29.4	5.8	3.3	chr15	67914963	67914995	(34076194)	+	(TCTTTC)n	Simple_repeat	3	92	(0)	1337370
21	26.9	2.0	4.8	chr15	68054173	68054274	(33936915)	+	G-rich	Low_complexity	1	104	(0)	1337661
13	19.4	0.0	2.7	chr15	68818818	68818854	(33172335)	+	(CCCCCA)n	Simple_repeat	1	37	(0)	1339118
11	31.8	1.9	0.0	chr15	68818933	68818986	(33172203)	+	(CCCGCC)n	Simple_repeat	1	55	(0)	1339119
31	11.2	2.0	0.0	chr15	70097767	70097815	(31893374)	+	(AC)n	Simple_repeat	1	50	(0)	1341464
2130	10.8	0.0	3.7	chr15	71203373	71203669	(30787520)	+	AluSz	SINE/Alu	1	286	(26)	1343351
197	32.4	3.0	7.1	chr15	71203670	71203735	(30787454)	C	L2c	LINE/L2	(630)	2789	2732	1343350
193	33.9	0.0	0.0	chr15	71203761	71203822	(30787367)	C	L2b	LINE/L2	(2)	3373	3312	1343352
13	21.7	0.0	7.3	chr15	72272560	72272614	(29718575)	+	G-rich	Low_complexity	1	55	(0)	1345170
32	23.8	0.0	7.2	chr15	72319477	72319601	(29671588)	+	G-rich	Low_complexity	1	125	(0)	1345246
31	24.4	2.6	6.4	chr15	72319943	72320095	(29671094)	+	G-rich	Low_complexity	1	157	(0)	1345247
15	17.0	0.0	0.0	chr15	73684943	73684975	(28306214)	+	G-rich	Low_complexity	1	33	(0)	1347540
11	29.6	1.6	3.2	chr15	73685173	73685233	(28305956)	+	G-rich	Low_complexity	1	62	(0)	1347541
730	32.6	11.6	3.3	chr15	73691180	73691670	(28299519)	C	MLT1K	LTR/ERVL-MaLR	(10)	585	49	1347554
257	35.6	15.4	1.3	chr15	73691731	73691958	(28299231)	+	L3	LINE/CR1	2385	2650	(1449)	1347555
319	30.4	7.1	4.6	chr15	73753801	73754138	(28237051)	C	L2c	LINE/L2	(1)	3374	3019	1347661
19	18.9	0.0	0.0	chr15	73823376	73823411	(28167778)	+	(T)n	Simple_repeat	1	36	(0)	1347783
274	33.7	6.3	2.4	chr15	74123427	74123593	(27867596)	C	MIR3	SINE/MIR	(31)	177	4	1348298
16	28.6	0.0	1.8	chr15	74133618	74133674	(27857515)	+	G-rich	Low_complexity	1	57	(0)	1348312
183	27.5	7.6	8.4	chr15	74213836	74213954	(27777235)	C	MIR3	SINE/MIR	(87)	121	4	1348453
181	31.4	1.9	0.0	chr15	74213922	74213972	(27777217)	+	MIRc	SINE/MIR	102	153	(115)	1348454
26	6.8	4.2	2.0	chr15	74214879	74214926	(27776263)	+	(TTCA)n	Simple_repeat	1	50	(0)	1348456
1991	11.4	1.9	1.3	chr15	74215236	74215545	(27775644)	+	L1MB2	LINE/L1	5853	6164	(7)	1348457
60	4.4	1.4	1.4	chr15	74223724	74223796	(27767393)	+	(AC)n	Simple_repeat	1	74	(0)	1348475
13	13.1	0.0	0.0	chr15	74291623	74291647	(27699542)	+	(AGGC)n	Simple_repeat	1	25	(0)	1348595
20	18.4	2.0	1.9	chr15	74615919	74615969	(27375220)	+	(GCG)n	Simple_repeat	1	52	(0)	1349184
2212	6.3	4.7	0.7	chr15	74759964	74760249	(27230940)	C	AluY	SINE/Alu	(13)	298	1	1349461
430	28.4	4.9	2.5	chr15	74760254	74760412	(27230777)	C	MLT1M	LTR/ERVL-MaLR	(402)	270	108	1349462
16	26.4	5.6	0.0	chr15	74826536	74826607	(27164582)	+	G-rich	Low_complexity	1	76	(0)	1349591
15	23.0	0.0	0.0	chr15	74826648	74826688	(27164501)	+	(GTGCCCG)n	Simple_repeat	1	41	(0)	1349592
12	19.4	1.9	7.3	chr15	74827076	74827129	(27164060)	+	G-rich	Low_complexity	1	55	(0)	1349593
428	28.8	3.0	1.8	chr15	74956962	74957124	(27034065)	C	MamRep1879	DNA/hAT-Tip100?	(36)	180	16	1349867
248	17.6	3.8	0.0	chr15	74995227	74995277	(26995912)	C	MIRc	SINE/MIR	(97)	171	119	1349978
16	23.9	0.0	0.0	chr15	75201839	75201873	(26789316)	+	(C)n	Simple_repeat	1	35	(0)	1350396
20	13.2	0.0	4.4	chr15	75201874	75201881	(26789308)	+	(CGCCC)n	Simple_repeat	3	45	(0)	1350397
2203	13.1	0.0	1.0	chr15	75204465	75204809	(26786380)	C	AluSz	SINE/Alu	(0)	312	1	1350398
13	11.6	3.6	0.0	chr15	75579312	75579339	(26411850)	+	G-rich	Low_complexity	1	29	(0)	1351123
21	24.8	2.7	1.3	chr15	75579480	75579552	(26411637)	+	G-rich	Low_complexity	1	75	(0)	1351124
12	34.4	2.6	1.2	chr15	75843554	75843631	(26147558)	+	(CGGCCC)n	Simple_repeat	1	80	(0)	1351619
11	24.5	2.2	2.2	chr15	76335297	76335341	(25655848)	+	(GGCCTC)n	Simple_repeat	1	46	(0)	1352418
13	17.6	0.0	2.9	chr15	76338004	76338037	(25653152)	+	G-rich	Low_complexity	1	34	(0)	1352424
22	20.6	6.9	2.1	chr15	77632902	77632988	(24358201)	+	(GAGC)n	Simple_repeat	1	93	(0)	1354380
17	3.3	9.7	0.0	chr15	77633008	77633038	(24358151)	+	(TGG)n	Simple_repeat	1	34	(0)	1354381
271	36.5	2.7	1.4	chr15	77753267	77753413	(24237776)	+	MIR3	SINE/MIR	35	183	(25)	1354599
16	28.6	1.3	3.9	chr15	78131451	78131527	(23859662)	+	(GGCACCC)n	Simple_repeat	1	78	(0)	1355268
184	30.4	8.2	0.7	chr15	78131757	78131902	(23859287)	+	MIR3	SINE/MIR	25	182	(26)	1355269
14	21.1	0.0	2.5	chr15	78264886	78264925	(23726264)	+	G-rich	Low_complexity	1	40	(0)	1355545
424	25.4	3.3	0.0	chr15	78825553	78825670	(23165519)	+	L1M5	LINE/L1	5355	5476	(648)	1356666
245	25.8	4.0	3.0	chr15	78825690	78825789	(23165400)	C	HAL1	LINE/L1	(0)	2507	2407	1356667
44	2.4	0.0	0.0	chr15	78825792	78825833	(23165356)	+	(AC)n	Simple_repeat	1	42	(0)	1356668
1059	16.6	0.6	0.0	chr15	78826215	78826377	(23164812)	C	FRAM	SINE/Alu	(12)	164	1	1356669
19	20.0	0.9	11.1	chr15	78872783	78872889	(23118300)	+	G-rich	Low_complexity	1	108	(0)	1356790
20	16.4	0.0	0.0	chr15	79090935	79090975	(22900214)	+	(CACACA)n	Simple_repeat	1	41	(0)	1357222
16	15.5	2.8	0.0	chr15	79090975	79091010	(22900179)	+	(CCCTC)n	Simple_repeat	1	37	(0)	1357223
54	1.8	1.8	0.0	chr15	80153168	80153224	(21837965)	+	(GGAGT)n	Simple_repeat	1	58	(0)	1359073
213	20.5	14.3	2.5	chr15	80153278	80153357	(21837832)	+	MIR	SINE/MIR	41	131	(131)	1359074
15	12.7	6.4	4.0	chr15	81000953	81000999	(20990190)	+	(CGGCGG)n	Simple_repeat	1	50	(0)	1360519
26428	2.2	0.1	0.0	chr15	81668514	81674504	(20316685)	C	L1PA2	LINE/L1	(33)	6122	124	1361647
12	14.1	0.0	8.1	chr15	82647385	82647421	(19343768)	+	(CCCG)n	Simple_repeat	1	37	(0)	1363212
311	33.6	11.0	6.0	chr15	82985327	82985741	(19005448)	C	L2	LINE/L2	(623)	2796	2359	1363815
275	28.4	4.1	0.0	chr15	84601379	84601494	(17389695)	C	MIR3	SINE/MIR	(29)	179	59	1366244
13	15.8	6.8	2.1	chr15	84817663	84817706	(17173483)	+	(GGCCTGG)n	Simple_repeat	1	47	(0)	1366711
187	17.8	0.0	4.3	chr15	84981178	84981224	(17009965)	+	MIR3	SINE/MIR	81	125	(83)	1367056
325	20.0	2.8	0.0	chr15	88613150	88613219	(13377970)	+	MIRb	SINE/MIR	55	126	(142)	1372681
3240	11.9	1.0	3.7	chr15	88972774	88973314	(13017875)	C	MER51C	LTR/ERV1	(134)	506	1	1373356
523	31.5	7.4	3.5	chr15	89419701	89419960	(12571229)	+	L2	LINE/L2	2686	2956	(463)	1374169
65	0.0	0.0	0.0	chr15	89470497	89470551	(12520638)	+	(GT)n	Simple_repeat	1	55	(0)	1374261
59	9.1	0.0	0.0	chr15	89776890	89776973	(12214216)	+	(AGGGGC)n	Simple_repeat	1	84	(0)	1374860
271	33.1	10.7	0.0	chr15	89783777	89783909	(12207280)	C	MIRb	SINE/MIR	(23)	245	97	1374875
249	26.5	2.9	2.9	chr15	90061802	90061871	(11929318)	C	MIRb	SINE/MIR	(100)	168	99	1375521
33	20.1	5.2	2.0	chr15	90062142	90062237	(11928952)	+	(TC)n	Simple_repeat	1	101	(0)	1375522
249	28.8	1.5	2.9	chr15	90152146	90152281	(11838908)	+	L1ME4a	LINE/L1	5990	6123	(1)	1375749
777	31.7	18.7	0.4	chr15	90152531	90153049	(11838140)	+	L3	LINE/CR1	2509	3144	(955)	1375750
199	31.2	1.4	0.5	chr15	90956572	90956660	(11034529)	C	MIRc	SINE/MIR	(92)	170	83	1377409
15	15.4	0.0	5.0	chr15	90957491	90957530	(11033659)	+	G-rich	Low_complexity	1	40	(0)	1377410
12	21.7	0.0	4.9	chr15	90994724	90994764	(10996425)	+	(TGGCC)n	Simple_repeat	1	41	(0)	1377487
298	26.4	1.1	6.2	chr15	92655988	92656084	(9335105)	C	MIRb	SINE/MIR	(41)	227	136	1380170
13	8.7	4.0	0.0	chr15	93331618	93331642	(8659547)	+	(TCCC)n	Simple_repeat	1	26	(0)	1381470
15	16.8	0.0	2.8	chr15	99015203	99015238	(2975951)	+	(GCCTCG)n	Simple_repeat	1	36	(0)	1389443
348	30.0	10.8	2.8	chr16	383571	383824	(89954521)	+	L1ME4b	LINE/L1	572	848	(44)	1394654
12	18.3	5.4	0.0	chr16	384109	384145	(89954200)	+	(GCACCCA)n	Simple_repeat	1	39	(0)	1394655
11	15.2	2.4	7.0	chr16	630884	630925	(89707420)	+	(CCTCTGG)n	Simple_repeat	1	43	(0)	1395033
200	20.8	13.2	0.0	chr16	675308	675379	(89662966)	C	L2b	LINE/L2	(166)	3209	3127	1395068
237	6.1	0.0	0.0	chr16	675348	675380	(89662965)	C	L2c	LINE/L2	(226)	3161	3129	1395069
12	20.8	0.0	2.9	chr16	721433	721467	(89616878)	+	(GCAGG)n	Simple_repeat	1	35	(0)	1395116
12	18.6	6.7	2.1	chr16	1474877	1474921	(88863424)	+	(CCG)n	Simple_repeat	1	48	(0)	1395967
35	23.7	3.6	3.5	chr16	1763788	1763924	(88574421)	+	G-rich	Low_complexity	1	142	(0)	1396368
278	34.4	2.1	0.0	chr16	2211181	2211273	(88127072)	+	L2b	LINE/L2	3279	3373	(2)	1397041
13	21.0	0.0	4.8	chr16	2715458	2715499	(87622846)	+	(GTGG)n	Simple_repeat	1	42	(0)	1397799
13	11.1	9.3	5.1	chr16	2752706	2752759	(87585586)	+	(GAGGC)n	Simple_repeat	1	59	(0)	1397879
205	26.3	10.8	3.9	chr16	2778202	2778304	(87560041)	+	MIRc	SINE/MIR	61	171	(97)	1397908
1351	19.2	12.2	7.2	chr16	2873985	2874380	(87463965)	C	L1MB7	LINE/L1	(43)	6141	5709	1398077
2009	14.1	1.3	1.3	chr16	2874553	2874864	(87463481)	+	AluSz	SINE/Alu	1	312	(0)	1398079
882	12.1	0.0	0.8	chr16	2902595	2902718	(87435627)	+	AluJo	SINE/Alu	85	207	(105)	1398140
12	8.0	0.0	9.4	chr16	2963558	2963589	(87374756)	+	G-rich	Low_complexity	1	32	(0)	1398269
423	30.8	5.1	1.5	chr16	3018373	3018504	(87319841)	+	MIRc	SINE/MIR	20	156	(112)	1398337
19	23.5	2.9	2.9	chr16	3020314	3020381	(87317964)	+	(GGC)n	Simple_repeat	1	70	(0)	1398343
11	7.0	0.0	12.8	chr16	3020504	3020542	(87317803)	+	G-rich	Low_complexity	1	39	(0)	1398344
18	0.0	0.0	6.7	chr16	3106652	3106681	(87231664)	+	(GGCGG)n	Simple_repeat	1	30	(0)	1398512
15	13.2	4.4	4.3	chr16	3106682	3106696	(87231649)	+	(GGCTGG)n	Simple_repeat	1	47	(0)	1398513
252	27.5	5.9	0.0	chr16	3149957	3150036	(87188309)	+	MIRb	SINE/MIR	155	239	(29)	1398595
18	7.7	0.0	0.0	chr16	3150096	3150123	(87188222)	+	(TGGGC)n	Simple_repeat	1	28	(0)	1398596
204	27.6	11.5	4.7	chr16	3283093	3283221	(87055124)	+	MER5B	DNA/hAT-Charlie	30	168	(10)	1398902
252	10.8	0.0	0.0	chr16	4767412	4767448	(85570897)	C	MLT1D	LTR/ERVL-MaLR	(224)	281	245	1401813
1460	9.6	19.4	0.0	chr16	4767449	4767677	(85570668)	+	AluSp	SINE/Alu	3	286	(27)	1401814
460	30.3	4.8	3.6	chr16	4937584	4937791	(85400554)	+	MIRb	SINE/MIR	20	231	(37)	1402176
295	27.7	2.5	5.7	chr16	4956393	4956590	(85381755)	C	L2c	LINE/L2	(14)	3361	3217	1402237
245	30.3	11.7	2.4	chr16	5036785	5037177	(85301168)	C	L2a	LINE/L2	(95)	3331	2841	1402431
499	20.1	8.0	0.7	chr16	5037178	5037317	(85301028)	C	L1MB7	LINE/L1	(0)	6184	6034	1402432
675	27.7	7.8	10.0	chr16	5134770	5134834	(85203511)	+	MLT1D	LTR/ERVL-MaLR	389	467	(0)	1402639
704	20.7	1.3	2.0	chr16	5135037	5135189	(85203156)	+	MER5A1	DNA/hAT-Charlie	15	166	(0)	1402642
120	24.9	1.6	1.2	chr16	5228590	5228907	(85109438)	+	GA-rich	Low_complexity	1	323	(0)	1402854
224	32.0	2.6	0.0	chr16	11182489	11182563	(79155782)	+	MIRb	SINE/MIR	98	174	(94)	1415040
2148	11.6	0.7	0.7	chr16	11315189	11315490	(79022855)	+	AluSz	SINE/Alu	1	302	(10)	1415390
13	15.4	5.6	0.0	chr16	11315576	11315611	(79022734)	+	(CCCCCT)n	Simple_repeat	1	38	(0)	1415391
316	25.0	5.0	1.0	chr16	11315793	11315889	(79022456)	C	L1M5	LINE/L1	(461)	5663	5563	1415392
214	28.7	5.0	0.0	chr16	11665493	11665586	(78672759)	+	MIR	SINE/MIR	2	100	(162)	1416263
13	19.7	1.6	8.1	chr16	12902636	12902696	(77435649)	+	(CCTCC)n	Simple_repeat	1	62	(0)	1418923
30	16.9	0.0	0.0	chr16	12902816	12902868	(77435477)	+	(GT)n	Simple_repeat	1	53	(0)	1418924
2498	17.6	2.8	3.7	chr16	17392581	17393213	(72945132)	+	MER4CL34	LTR/ERV1	4	872	(0)	1428984
2325	10.5	1.9	0.3	chr16	18946484	18946789	(71391556)	+	AluSx1	SINE/Alu	1	311	(1)	1432253
3252	11.8	7.0	0.2	chr16	19948689	19949198	(70389147)	+	LTR35A	LTR/ERV1	1	547	(0)	1434773
28513	2.4	0.1	0.0	chr16	21042673	21048703	(69289642)	C	L1PA2	LINE/L1	(0)	6155	124	1437024
25202	6.1	1.3	0.1	chr16	23093874	23099522	(67238823)	+	L1P2	LINE/L1	174	5868	(459)	1441426
12	29.9	0.0	5.9	chr16	23596346	23596413	(66741932)	+	(CGG)n	Simple_repeat	1	68	(0)	1442647
374	35.4	0.0	0.0	chr16	25950765	25950891	(64387454)	+	MIRb	SINE/MIR	120	246	(22)	1448032
12	27.3	2.0	2.0	chr16	27109836	27109885	(63228460)	+	(GCG)n	Simple_repeat	1	51	(0)	1450386
28	0.0	0.0	0.0	chr16	27110175	27110201	(63228144)	+	(T)n	Simple_repeat	1	27	(0)	1450387
261	20.5	11.2	4.4	chr16	27203168	27203324	(63135021)	+	MIRb	SINE/MIR	26	200	(62)	1450614
225	15.8	2.6	0.0	chr16	27327044	27327081	(63011264)	C	tRNA-Ile-ATA	tRNA	(38)	39	1	1450890
190	26.9	10.1	0.0	chr16	28294340	28294433	(62043912)	C	MIR1_Amn	SINE/MIR	(42)	188	81	1453126
705	26.9	4.4	0.0	chr16	28303994	28304209	(62034136)	+	L1ME4b	LINE/L1	315	540	(352)	1453146
586	21.0	12.7	1.1	chr16	28304396	28304576	(62033769)	+	MIRb	SINE/MIR	20	225	(43)	1453147
20	23.8	1.4	4.0	chr16	28554226	28554299	(61784046)	+	G-rich	Low_complexity	1	75	(0)	1453837
2262	10.9	0.0	0.7	chr16	28862927	28863230	(61475115)	C	AluSx	SINE/Alu	(10)	302	1	1454613
13	16.5	0.0	0.0	chr16	28863250	28863276	(61475069)	+	(CCA)n	Simple_repeat	1	27	(0)	1454614
13	29.6	0.0	0.0	chr16	28863277	28863294	(61475051)	+	(CCCACC)n	Simple_repeat	2	46	(0)	1454615
15	25.6	1.4	5.5	chr16	28924715	28924786	(61413559)	+	(GCCCCT)n	Simple_repeat	1	73	(0)	1454762
498	19.9	6.2	2.8	chr16	29029646	29029799	(61308546)	+	MIR3	SINE/MIR	23	173	(95)	1455035
1557	22.6	7.9	4.8	chr16	29679667	29679959	(60658386)	C	LTR14C	LTR/ERVK	(41)	546	152	1456282
1951	16.6	0.3	0.0	chr16	29745051	29745346	(60592999)	+	AluJb	SINE/Alu	1	297	(15)	1456462
13	11.3	0.0	8.6	chr16	29814178	29814212	(60524133)	+	(CCT)n	Simple_repeat	1	35	(0)	1456618
14	15.7	0.0	5.1	chr16	30021418	30021456	(60316889)	+	(GGAGATG)n	Simple_repeat	1	39	(0)	1457090
372	32.3	5.1	0.0	chr16	30096558	30096687	(60241658)	C	MIR	SINE/MIR	(70)	192	56	1457252
2181	11.0	0.7	1.0	chr16	30558833	30559140	(59779205)	+	AluSx	SINE/Alu	6	312	(0)	1458331
13	25.3	2.0	2.0	chr16	30585555	30585603	(59752742)	+	G-rich	Low_complexity	1	50	(0)	1458400
305	34.5	3.8	4.7	chr16	30677955	30678167	(59660178)	+	MIRb	SINE/MIR	50	260	(8)	1458624
18	7.7	0.0	0.0	chr16	30698185	30698212	(59640133)	+	(GTG)n	Simple_repeat	1	28	(0)	1458687
12	28.1	3.9	0.0	chr16	30775721	30775772	(59562573)	+	(CTGGCG)n	Simple_repeat	1	54	(0)	1458832
11	19.1	5.9	3.7	chr16	30775915	30775965	(59562380)	+	G-rich	Low_complexity	1	54	(0)	1458833
24	24.8	4.8	2.7	chr16	30894116	30894220	(59444125)	+	(CCGGC)n	Simple_repeat	1	110	(0)	1459123
250	26.2	0.0	3.2	chr16	30894500	30894562	(59443783)	C	L2c	LINE/L2	(0)	3387	3327	1459124
17	16.6	0.0	4.5	chr16	31214642	31214685	(59123660)	+	(GGCTG)n	Simple_repeat	1	44	(0)	1459868
439	22.6	0.0	0.0	chr16	31443281	31443364	(58894981)	C	MER96B	DNA/hAT-Tip100	(3)	414	331	1460322
426	15.8	2.6	0.0	chr16	49158048	49158123	(41180222)	C	MER96	DNA/hAT-Tip100	(0)	175	98	1470085
14	17.0	0.0	2.9	chr16	49280378	49280412	(41057933)	+	(CCCT)n	Simple_repeat	1	35	(0)	1470269
308	32.0	4.0	0.9	chr16	49696022	49696148	(40642197)	+	MIRb	SINE/MIR	81	218	(50)	1470951
32	12.8	7.6	1.2	chr16	49855654	49855732	(40482613)	+	(GCTC)n	Simple_repeat	1	85	(0)	1471240
13	13.3	9.3	2.1	chr16	49855794	49855836	(40482509)	+	(CCG)n	Simple_repeat	1	47	(0)	1471241
15	28.4	0.0	6.5	chr16	49876423	49876460	(40461885)	+	GA-rich	Low_complexity	1	75	(0)	1471284
12	27.4	0.0	0.0	chr16	49876461	49876497	(40461848)	+	G-rich	Low_complexity	1	37	(0)	1471285
16	6.8	6.5	0.0	chr16	50065936	50065967	(40272378)	+	(CCCCGA)n	Simple_repeat	1	34	(0)	1471725
13	26.4	3.2	3.1	chr16	50066194	50066255	(40272090)	+	(GGC)n	Simple_repeat	1	64	(0)	1471726
26160	6.2	1.6	0.1	chr16	50343340	50349410	(39988935)	+	L1PA5	LINE/L1	4	6154	(0)	1472285
17	20.6	0.0	0.0	chr16	53055666	53055704	(37282641)	+	(CCT)n	Simple_repeat	1	39	(0)	1477120
32	26.1	4.0	4.5	chr16	56281476	56281626	(34056719)	+	(CTCTTTC)n	Simple_repeat	1	157	(0)	1482823
206	13.9	4.4	0.0	chr16	57105683	57105725	(33232620)	+	MIR1_Amn	SINE/MIR	102	146	(84)	1484365
43	0.0	0.0	0.0	chr16	57532699	57532735	(32805610)	+	(AC)n	Simple_repeat	1	37	(0)	1485260
17	3.7	3.3	3.2	chr16	57532822	57532851	(32805494)	+	(GGA)n	Simple_repeat	1	31	(0)	1485261
1895	13.4	5.9	3.6	chr16	57675644	57675976	(32662369)	+	L1MB5	LINE/L1	5824	6161	(13)	1485553
681	16.5	0.0	5.7	chr16	57675977	57675997	(32662348)	+	FLAM_C	SINE/Alu	117	133	(0)	1485551
16	15.8	2.8	0.0	chr16	57735899	57735934	(32602411)	+	G-rich	Low_complexity	1	37	(0)	1485672
1822	14.0	0.4	0.4	chr16	57846903	57847173	(32491172)	+	AluSz	SINE/Alu	1	271	(41)	1485875
12	23.8	0.0	6.0	chr16	58001348	58001397	(32336948)	+	(CCGCC)n	Simple_repeat	1	50	(0)	1486244
12	23.3	2.5	0.0	chr16	58001525	58001564	(32336781)	+	(CGAGGA)n	Simple_repeat	1	41	(0)	1486245
14	17.0	3.0	0.0	chr16	58026435	58026467	(32311878)	+	(CTG)n	Simple_repeat	1	34	(0)	1486286
567	33.6	2.6	5.7	chr16	61042567	61042847	(29295498)	C	LTR16E2	LTR/ERVL	(12)	556	285	1491252
6339	7.6	19.0	1.3	chr16	63616664	63617691	(26720654)	C	LTR12D	LTR/ERV1	(1)	1253	1	1495151
5516	17.9	16.4	4.9	chr16	63617692	63618801	(26719544)	C	MER52A	LTR/ERV1	(345)	1410	1	1495150
11607	15.1	1.6	3.1	chr16	64614323	64616310	(25722035)	C	L1PA8A	LINE/L1	(4521)	1962	1	1496630
13	15.7	2.6	5.0	chr16	65224427	65224465	(25113880)	+	(TAT)n	Simple_repeat	1	40	(0)	1497622
228	26.8	0.0	0.0	chr16	65224478	65224533	(25113812)	+	MIRc	SINE/MIR	78	133	(135)	1497623
15	17.2	2.4	2.4	chr16	66552529	66552569	(23785776)	+	(GCGCGT)n	Simple_repeat	1	42	(0)	1499952
203	37.8	0.0	3.0	chr16	66880966	66881096	(23457249)	C	MIRb	SINE/MIR	(116)	152	26	1500614
13	23.1	0.0	9.0	chr16	67174473	67174539	(23163806)	+	(GCAGG)n	Simple_repeat	1	67	(0)	1501216
12	22.1	2.7	0.0	chr16	67178507	67178543	(23159802)	+	G-rich	Low_complexity	1	38	(0)	1501222
251	30.8	7.1	0.0	chr16	67185693	67185770	(23152575)	+	MIR3	SINE/MIR	64	147	(61)	1501229
1920	16.4	11.3	1.2	chr16	67488980	67489386	(22848959)	C	MER61F	LTR/ERV1	(223)	453	1	1501709
12	15.3	5.3	2.5	chr16	68234154	68234191	(22104154)	+	(GGCA)n	Simple_repeat	1	40	(0)	1503207
2248	9.2	0.0	0.0	chr16	68240256	68240568	(22097777)	C	AluSq2	SINE/Alu	(0)	313	1	1503213
15	27.2	0.0	3.5	chr16	68737345	68737401	(21600944)	+	(CCGGC)n	Simple_repeat	1	57	(0)	1504212
13	0.0	0.0	0.0	chr16	68737445	68737461	(21600884)	+	(GCT)n	Simple_repeat	1	17	(0)	1504213
25	19.9	1.5	2.9	chr16	71289614	71289681	(19048664)	+	G-rich	Low_complexity	1	69	(0)	1509393
593	4.1	0.0	0.0	chr16	71426493	71426565	(18911780)	+	tRNA-Met	tRNA	1	73	(3)	1509672
16	0.0	0.0	0.0	chr16	71467961	71467977	(18870368)	+	(G)n	Simple_repeat	1	17	(0)	1509741
2183	10.9	1.0	0.0	chr16	71468075	71468359	(18869986)	C	AluSq2	SINE/Alu	(25)	288	1	1509742
23	17.9	1.9	1.8	chr16	73047504	73047557	(17290788)	+	GA-rich	Low_complexity	1	55	(0)	1512327
12	26.5	5.0	1.6	chr16	74985009	74985068	(15353277)	+	(CGC)n	Simple_repeat	1	63	(0)	1515869
230	26.7	8.4	6.4	chr16	75262406	75262545	(15075800)	C	L2c	LINE/L2	(231)	3156	3014	1516404
17	27.5	3.3	0.0	chr16	75265985	75266045	(15072300)	+	(GCC)n	Simple_repeat	1	63	(0)	1516407
362	31.0	16.9	0.8	chr16	75266351	75266597	(15071748)	C	L3	LINE/CR1	(124)	3975	3681	1516408
21	27.4	5.8	2.4	chr16	75566366	75566485	(14771860)	+	(CCGCTG)n	Simple_repeat	1	127	(0)	1517068
631	25.2	4.7	1.0	chr16	81711898	81712101	(8626244)	C	MER20	DNA/hAT-Charlie	(0)	219	8	1527829
184	27.1	13.7	6.1	chr16	81730244	81730357	(8607988)	+	MamTip2	DNA/hAT-Tip100	182	305	(0)	1527883
17936	3.8	0.1	0.4	chr16	81977354	81978467	(8359878)	+	L1PA3	LINE/L1	124	1237	(4918)	1528424
729	24.3	12.1	0.0	chr16	83701895	83702083	(6636262)	+	MIR	SINE/MIR	48	262	(0)	1531446
1403	21.7	13.3	8.2	chr16	83769371	83769946	(6568399)	C	LTR36	LTR/ERV1	(0)	611	2	1531559
3301	12.0	9.3	3.5	chr16	83769947	83770069	(6568276)	C	LTR26D	LTR/ERV1	(483)	121	1	1531557
5925	11.1	3.2	1.8	chr16	83840051	83840934	(6497411)	C	MER4D	LTR/ERV1	(0)	903	7	1531698
2115	11.0	3.4	0.7	chr16	83840935	83841224	(6497121)	+	AluSp	SINE/Alu	1	298	(15)	1531699
1296	17.0	3.2	10.6	chr16	83841225	83841279	(6497066)	C	MER4D1	LTR/ERV1	(323)	287	235	1531700
1549	16.6	4.5	0.0	chr16	83841280	83841422	(6496923)	C	AluJr	SINE/Alu	(34)	278	135	1531701
1387	28.5	7.6	3.0	chr16	84279090	84279592	(6058753)	+	LTR33A_	LTR/ERVL	2	529	(2)	1532501
685	29.5	8.9	3.3	chr16	84647849	84648153	(5690192)	C	L2a	LINE/L2	(0)	3426	3103	1533297
12	16.7	5.9	0.0	chr16	85310646	85310679	(5027666)	+	(CAGG)n	Simple_repeat	1	36	(0)	1534608
14	20.6	2.1	4.1	chr16	85310781	85310830	(5027515)	+	(CCCA)n	Simple_repeat	1	49	(0)	1534609
1216	24.5	11.0	4.6	chr16	85402930	85403412	(4934933)	C	MLT1F2	LTR/ERVL-MaLR	(30)	530	1	1534781
513	26.9	1.4	4.0	chr16	85420997	85421147	(4917198)	+	MIR	SINE/MIR	111	257	(5)	1534801
27	0.0	0.0	0.0	chr16	85611307	85611332	(4727013)	+	(CCCCTC)n	Simple_repeat	1	26	(0)	1535143
15	18.6	0.0	8.6	chr16	85689135	85689192	(4649153)	+	(CCGGC)n	Simple_repeat	1	58	(0)	1535214
679	0.0	0.0	0.0	chr16	87384022	87384094	(2954251)	C	tRNA-Met_	tRNA	(3)	73	1	1538340
1424	15.4	0.9	0.0	chr16	87542433	87542652	(2795693)	+	MER1A	DNA/hAT-Charlie	57	278	(251)	1538625
256	23.6	7.5	7.5	chr16	87542534	87542666	(2795679)	C	MER1A	DNA/hAT-Charlie	(252)	277	145	1538626
596	21.2	0.9	0.0	chr16	87542710	87542822	(2795523)	+	MER3	DNA/hAT-Charlie	1	114	(95)	1538627
3390	13.0	0.8	0.0	chr16	87542814	87543312	(2795033)	+	MER1A	DNA/hAT-Charlie	27	529	(0)	1538628
14	12.6	0.0	0.0	chr16	87608555	87608581	(2729764)	+	(GGAGA)n	Simple_repeat	1	27	(0)	1538772
2008	13.2	1.0	0.3	chr16	87608757	87609051	(2729294)	+	AluJb	SINE/Alu	2	298	(14)	1538773
606	27.6	8.0	4.7	chr16	87678665	87679025	(2659320)	+	MLT1C	LTR/ERVL-MaLR	79	452	(15)	1538907
1673	12.5	3.7	6.2	chr16	87766142	87766446	(2571899)	+	AluJr	SINE/Alu	1	297	(15)	1539015
738	13.5	0.0	0.0	chr16	87766548	87766651	(2571694)	C	AluSz6	SINE/Alu	(5)	307	204	1539016
358	27.8	11.1	0.7	chr16	88382211	88382355	(1955990)	+	MIR3	SINE/MIR	24	185	(23)	1539892
182	28.4	3.8	3.8	chr16	88560987	88561092	(1777253)	C	MIR3	SINE/MIR	(13)	195	90	1540120
13	8.7	4.0	0.0	chr16	88650833	88650857	(1687488)	+	(CCCGG)n	Simple_repeat	1	26	(0)	1540271
17	22.9	0.0	2.1	chr16	88651055	88651102	(1687243)	+	(CCGCC)n	Simple_repeat	1	48	(0)	1540272
15	17.5	5.5	3.5	chr16	88651103	88651109	(1687236)	+	(CCGGCC)n	Simple_repeat	1	58	(0)	1540273
15	23.0	0.0	5.4	chr16	89167665	89167720	(1170625)	+	(GCCCCCA)n	Simple_repeat	1	56	(0)	1540854
12	8.0	0.0	9.4	chr16	89686931	89686962	(651383)	+	G-rich	Low_complexity	1	32	(0)	1541680
23	15.9	1.3	7.9	chr16	89721474	89721548	(616797)	+	(CCCGC)n	Simple_repeat	1	76	(0)	1541727
580	16.7	0.0	0.0	chr16	89926575	89926670	(411675)	C	AluSx3	SINE/Alu	(13)	298	203	1542090
2321	10.5	0.3	0.0	chr16	89926711	89927016	(411329)	C	AluSq	SINE/Alu	(6)	307	1	1542091
528	27.2	0.0	2.4	chr16	90020021	90020186	(318159)	C	L1MC5	LINE/L1	(67)	9237	9076	1542242
597	23.4	4.5	0.8	chr16	90020198	90020325	(318020)	+	FLAM_C	SINE/Alu	4	136	(7)	1542243
268	35.0	3.9	4.7	chr17	489418	489546	(82767895)	C	L2c	LINE/L2	(159)	3228	3101	1545252
971	9.2	0.8	0.0	chr17	996420	996550	(82260891)	C	AluSx3	SINE/Alu	(179)	132	1	1546196
16	8.5	4.7	6.7	chr17	1456146	1456192	(81801249)	+	(GCC)n	Simple_repeat	1	46	(0)	1547172
181	34.8	4.3	10.9	chr17	1752356	1752474	(81504967)	C	MIRb	SINE/MIR	(48)	220	101	1547719
12	22.5	3.9	7.4	chr17	2303520	2303559	(80953882)	+	G-rich	Low_complexity	1	68	(13)	1548855
15	17.7	0.0	0.0	chr17	2303560	2303591	(80953850)	+	GA-rich	Low_complexity	1	32	(0)	1548856
13	17.7	5.3	0.0	chr17	2723953	2723990	(80533451)	+	G-rich	Low_complexity	1	40	(0)	1549781
2301	9.0	0.0	3.1	chr17	2725091	2725411	(80532030)	+	AluSx1	SINE/Alu	1	311	(1)	1549783
22	25.0	2.2	4.3	chr17	2749665	2749756	(80507685)	+	GA-rich	Low_complexity	1	94	(0)	1549847
341	25.9	10.1	3.0	chr17	2750082	2750266	(80507175)	+	MIR3	SINE/MIR	33	238	(30)	1549848
28153	2.8	0.2	0.4	chr17	3147367	3153409	(80104032)	C	L1PA2	LINE/L1	(0)	6155	125	1550629
805	23.3	11.4	2.7	chr17	3153414	3153748	(80103693)	C	LTR106_Mam	LTR	(334)	374	7	1550628
15	28.6	3.2	0.0	chr17	4143605	4143668	(79113773)	+	(GAGCGA)n	Simple_repeat	1	66	(0)	1552424
2192	7.8	2.5	0.3	chr17	4396448	4396753	(78860688)	+	AluSq	SINE/Alu	1	313	(0)	1552967
13	9.4	8.8	0.0	chr17	4413065	4413098	(78844343)	+	(CCTCCTT)n	Simple_repeat	1	37	(0)	1553012
673	27.9	8.7	4.0	chr17	4493106	4493378	(78764063)	C	L2c	LINE/L2	(0)	3387	3101	1553204
475	35.8	9.0	4.9	chr17	4493552	4493706	(78763735)	C	L2c	LINE/L2	(377)	3042	2891	1553204
2371	6.1	0.3	1.0	chr17	4704469	4704764	(78552677)	C	AluSx	SINE/Alu	(18)	294	1	1553577
629	23.4	6.1	1.9	chr17	4858006	4858210	(78399231)	+	MamRep1879	DNA/hAT-Tip100?	3	216	(0)	1553933
1646	10.7	0.0	3.0	chr17	4858458	4858690	(78398751)	C	AluSx	SINE/Alu	(0)	312	87	1553934
372	29.4	4.1	0.0	chr17	4934854	4935016	(78322425)	+	L1ME4a	LINE/L1	5952	6121	(3)	1554101
11	30.5	0.0	2.0	chr17	4949901	4949950	(78307491)	+	(CGCCCCC)n	Simple_repeat	1	50	(0)	1554115
22	18.8	3.5	9.2	chr17	4949989	4950104	(78307337)	+	G-rich	Low_complexity	1	120	(0)	1554116
19	17.3	2.1	2.0	chr17	6444058	6444105	(76813336)	+	G-rich	Low_complexity	1	49	(0)	1557110
18	10.4	0.0	0.0	chr17	6444345	6444375	(76813066)	+	(GGGGCG)n	Simple_repeat	1	31	(0)	1557111
12	23.3	7.3	0.0	chr17	7214009	7214063	(76043378)	+	(CCTTTTC)n	Simple_repeat	1	59	(0)	1558465
13	16.3	2.1	6.1	chr17	7239468	7239500	(76017941)	+	(GCC)n	Simple_repeat	1	30	(0)	1558483
28	4.2	0.0	8.6	chr17	7239501	7239558	(76017883)	+	(CCT)n	Simple_repeat	1	58	(0)	1558484
13	16.3	2.1	6.1	chr17	7239559	7239572	(76017869)	+	(GCC)n	Simple_repeat	1	15	(0)	1558485
16	18.4	7.9	1.5	chr17	7262511	7262573	(75994868)	+	G-rich	Low_complexity	1	68	(0)	1558514
258	5.6	0.0	0.0	chr17	7296286	7296334	(75961107)	+	FLAM_C	SINE/Alu	1	34	(99)	1558578
261	29.2	1.4	4.9	chr17	7351091	7351215	(75906226)	C	L2a	LINE/L2	(0)	3426	3255	1558665
11	12.3	2.3	9.1	chr17	7478897	7478939	(75778502)	+	(CACAAGA)n	Simple_repeat	1	44	(0)	1558906
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
11	22.0	2.2	4.3	chr17	7573782	7573827	(75683614)	+	(GCGAGG)n	Simple_repeat	1	47	(0)	1559097
16	13.5	0.0	8.3	chr17	7887728	7887775	(75369666)	+	(CTCCGCC)n	Simple_repeat	1	48	(0)	1559705
15	12.8	2.8	2.7	chr17	7916266	7916301	(75341140)	+	G-rich	Low_complexity	1	37	(0)	1559740
13	21.9	2.3	2.2	chr17	7922734	7922777	(75334664)	+	(TGTTTT)n	Simple_repeat	1	45	(0)	1559754
542	4.1	0.0	17.1	chr17	8120925	8121012	(75136429)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	1560131
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
693	1.3	0.0	0.0	chr17	8187160	8187235	(75070206)	+	tRNA-Thr-ACY	tRNA	1	76	(1)	1560265
678	0.0	0.0	0.0	chr17	8187593	8187666	(75069775)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	1560266
598	23.6	0.6	9.0	chr17	15332365	15332479	(67924962)	+	MIR	SINE/MIR	70	181	(81)	1572870
374	28.0	11.3	4.1	chr17	15332480	15332676	(67924765)	C	MamRep1879	DNA/hAT-Tip100?	(0)	216	4	1572871
598	23.6	0.6	9.0	chr17	15332677	15332760	(67924681)	+	MIR	SINE/MIR	182	252	(10)	1572870
15	19.9	0.0	4.5	chr17	16215481	16215524	(67041917)	+	(GCC)n	Simple_repeat	1	44	(0)	1574432
15	22.1	0.0	5.7	chr17	16381261	16381313	(66876128)	+	G-rich	Low_complexity	1	53	(0)	1574858
21	29.5	0.0	5.7	chr17	17477089	17477193	(65780248)	+	(GCCGCC)n	Simple_repeat	1	105	(0)	1576739
314	26.5	3.8	0.0	chr17	17477325	17477426	(65780015)	C	MIR3	SINE/MIR	(21)	187	82	1576740
17	30.7	1.3	2.5	chr17	17591331	17591409	(65666032)	+	(ACACGC)n	Simple_repeat	1	80	(0)	1576913
17	22.1	0.0	0.0	chr17	17700621	17700662	(65556779)	+	GA-rich	Low_complexity	1	42	(0)	1577188
245	25.9	1.2	4.7	chr17	17752872	17752956	(65504485)	+	L2b	LINE/L2	3287	3368	(7)	1577285
287	33.6	6.3	0.0	chr17	17824042	17824160	(65433281)	+	MIRb	SINE/MIR	95	221	(47)	1577411
289	33.4	14.9	1.9	chr17	17835886	17836193	(65421248)	+	L2b	LINE/L2	3003	3357	(18)	1577444
324	26.4	11.7	0.0	chr17	17838596	17838701	(65418740)	+	MIRb	SINE/MIR	37	156	(112)	1577448
224	13.2	0.5	4.7	chr17	18088113	18088165	(65169276)	+	MIR1_Amn	SINE/MIR	112	163	(105)	1577927
34	13.2	0.0	0.0	chr17	18184331	18184388	(65073053)	+	(GCCGCC)n	Simple_repeat	1	58	(0)	1578112
205	28.8	2.7	5.2	chr17	19377611	19377687	(63879754)	+	L2b	LINE/L2	3300	3374	(1)	1580482
12	19.5	0.0	8.3	chr17	19378660	19378707	(63878734)	+	(CCCCT)n	Simple_repeat	1	48	(0)	1580495
481	26.5	8.9	2.9	chr17	19647784	19648024	(63609417)	C	L2a	LINE/L2	(1123)	2296	2040	1581017
13	17.4	0.0	2.9	chr17	19648298	19648331	(63609110)	+	GA-rich	Low_complexity	1	34	(0)	1581022
5796	15.1	4.5	0.9	chr17	20201799	20202824	(63054617)	+	Tigger2b_Pri	DNA/TcMar-Tigger	3	1067	(1)	1582137
1265	27.0	7.0	3.0	chr17	28008849	28009341	(55248100)	C	Tigger11a	DNA/TcMar-Tigger	(164)	571	58	1587893
2230	8.2	0.3	5.0	chr17	28373986	28374303	(54883138)	+	AluSx1	SINE/Alu	2	304	(8)	1588531
544	34.5	11.6	0.7	chr17	28381869	28382464	(54874977)	C	L2c	LINE/L2	(231)	3156	2340	1588555
18	23.0	0.0	5.9	chr17	28745551	28745618	(54511823)	+	(CCCCTC)n	Simple_repeat	1	68	(0)	1589235
198	21.6	0.0	0.0	chr17	28761327	28761363	(54496078)	+	L2b	LINE/L2	3335	3371	(4)	1589255
12	19.7	2.3	4.4	chr17	28812233	28812276	(54445165)	+	(CGCTC)n	Simple_repeat	1	45	(0)	1589376
11	29.8	1.6	3.2	chr17	28812417	28812477	(54444964)	+	(CCCCAGC)n	Simple_repeat	1	62	(0)	1589377
477	30.9	10.0	3.1	chr17	28901943	28902451	(54354990)	+	L2b	LINE/L2	2661	3214	(161)	1589591
714	27.7	9.2	1.0	chr17	28968989	28969196	(54288245)	C	MIRb	SINE/MIR	(40)	228	2	1589679
12	26.6	4.1	4.0	chr17	29005984	29006056	(54251385)	+	(CAGCGC)n	Simple_repeat	1	76	(0)	1589755
496	20.0	3.7	1.9	chr17	29032376	29032482	(54224959)	+	MIRc	SINE/MIR	124	232	(36)	1589805
275	33.6	0.0	0.9	chr17	29042850	29042963	(54214478)	+	Eulor8	DNA/TcMar?	381	493	(69)	1589828
18	10.5	0.0	0.0	chr17	29294512	29294543	(53962898)	+	(TGTTT)n	Simple_repeat	1	32	(0)	1590289
15	25.7	1.9	1.9	chr17	29613497	29613549	(53643892)	+	GA-rich	Low_complexity	1	54	(0)	1591012
13	5.7	10.0	4.5	chr17	29613602	29613641	(53643800)	+	(CGCCAG)n	Simple_repeat	1	44	(0)	1591013
12	16.9	2.9	2.8	chr17	30235684	30235718	(53021723)	+	(GCGGC)n	Simple_repeat	1	36	(0)	1592201
16	16.5	3.8	5.5	chr17	31008692	31008744	(52248697)	+	(CCG)n	Simple_repeat	1	55	(0)	1593821
21	6.7	0.0	0.0	chr17	31095479	31095510	(52161931)	+	(GGAAG)n	Simple_repeat	1	32	(0)	1593995
12	30.2	7.3	0.0	chr17	31095511	31095557	(52161884)	+	GA-rich	Low_complexity	4	88	(0)	1593996
19	20.9	1.3	6.6	chr17	32341902	32341976	(50915465)	+	G-rich	Low_complexity	1	76	(0)	1596597
18	22.1	7.5	3.0	chr17	32341977	32341991	(50915450)	+	(GGCCG)n	Simple_repeat	5	101	(0)	1596598
26636	4.7	0.3	0.5	chr17	34030371	34036565	(49220876)	+	L1PA4	LINE/L1	2	6155	(0)	1599770
56	0.0	0.0	0.0	chr17	34157871	34157918	(49099523)	+	(GT)n	Simple_repeat	1	48	(0)	1599973
42	0.0	0.0	0.0	chr17	34157960	34157995	(49099446)	+	(GT)n	Simple_repeat	1	36	(0)	1599973
15	23.7	3.6	1.7	chr17	34633559	34633614	(48623827)	+	GA-rich	Low_complexity	1	58	(0)	1600776
936	14.8	10.2	0.0	chr17	34633724	34633872	(48623569)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	1600777
289	21.6	0.0	0.0	chr17	34703586	34703636	(48553805)	+	UCON85	Unknown	27	77	(3)	1600904
570	25.7	0.7	0.0	chr17	34703881	34704028	(48553413)	C	MamRep564	Unknown	(117)	240	92	1600905
440	37.9	9.1	5.2	chr17	34797942	34798362	(48459079)	+	L2b	LINE/L2	2918	3356	(19)	1601091
652	20.2	3.5	5.1	chr17	35243779	35243955	(48013486)	C	PrimLTR79	LTR/ERV1	(1)	502	329	1601983
13	20.5	6.7	0.0	chr17	35741251	35741295	(47516146)	+	(CGCTG)n	Simple_repeat	1	48	(0)	1602707
14	15.8	0.0	5.1	chr17	36182922	36182960	(47074481)	+	(CCGCCC)n	Simple_repeat	1	39	(0)	1603512
1284	15.6	14.9	0.0	chr17	36535656	36535911	(46721530)	C	AluJr	SINE/Alu	(10)	302	2	1604120
12	20.7	4.3	2.1	chr17	36722506	36722551	(46534890)	+	G-rich	Low_complexity	1	48	(0)	1604499
1042	8.0	0.0	2.9	chr17	36777073	36777209	(46480232)	C	AluSz	SINE/Alu	(179)	133	1	1604618
193	19.7	0.0	0.0	chr17	36777212	36777256	(46480185)	C	MIRc	SINE/MIR	(56)	152	108	1604619
25	19.2	3.4	8.2	chr17	38452083	38452200	(44805241)	+	(CCCT)n	Simple_repeat	1	122	(0)	1607890
15	14.9	2.6	2.5	chr17	38469997	38470035	(44787406)	+	(TCCTGC)n	Simple_repeat	1	40	(0)	1607918
31	2.9	2.9	0.0	chr17	38614030	38614064	(44643377)	+	(CA)n	Simple_repeat	1	36	(0)	1608181
266	34.0	0.7	4.1	chr17	38614066	38614212	(44643229)	+	L2c	LINE/L2	3022	3163	(224)	1608182
14	0.0	3.5	6.7	chr17	38671647	38671675	(44585766)	+	(CCCAC)n	Simple_repeat	1	30	(0)	1608321
23	14.5	0.0	0.0	chr17	38751735	38751772	(44505669)	+	(A)n	Simple_repeat	1	38	(0)	1608488
698	1.3	0.0	0.0	chr17	38751778	38751854	(44505587)	C	tRNA-Asn-AAC	tRNA	(0)	77	1	1608489
17	20.3	0.0	5.4	chr17	38869952	38870007	(44387434)	+	(CGTGCC)n	Simple_repeat	1	56	(0)	1608780
54	0.0	0.0	0.0	chr17	39153335	39153380	(44104061)	+	(GT)n	Simple_repeat	1	46	(0)	1609429
725	10.8	1.0	0.0	chr17	39153382	39153483	(44103958)	C	AluJo	SINE/Alu	(15)	297	195	1609430
619	15.8	15.9	0.0	chr17	39153486	39153612	(44103829)	C	MER5A	DNA/hAT-Charlie	(38)	151	1	1609431
423	35.2	1.2	1.2	chr17	39209213	39209373	(44048068)	+	MIR3	SINE/MIR	5	165	(43)	1609550
461	32.9	6.9	0.0	chr17	39209372	39209520	(44047921)	+	MIRb	SINE/MIR	88	247	(21)	1609551
17	24.6	2.3	0.0	chr17	39461509	39461552	(43795889)	+	(GT)n	Simple_repeat	1	45	(0)	1610148
12	28.1	0.0	3.9	chr17	39631677	39631689	(43625752)	+	G-rich	Low_complexity	1	50	(0)	1610494
12	11.7	10.8	0.0	chr17	39631690	39631726	(43625715)	+	GA-rich	Low_complexity	1	41	(0)	1610495
188	32.5	8.7	5.4	chr17	39631728	39631893	(43625548)	+	L3b	LINE/CR1	4942	5113	(119)	1610496
361	28.9	3.0	0.0	chr17	39645291	39645387	(43612054)	C	MIRb	SINE/MIR	(118)	150	51	1610513
764	31.6	14.7	1.1	chr17	39652280	39652929	(43604512)	C	L2a	LINE/L2	(0)	3426	2658	1610533
484	37.7	5.3	0.0	chr17	39704963	39705177	(43552264)	+	MIRb	SINE/MIR	8	234	(34)	1610625
18	9.8	0.0	2.9	chr17	39705301	39705335	(43552106)	+	(CCTGGG)n	Simple_repeat	1	35	(0)	1610626
12	23.3	4.4	0.0	chr17	39980700	39980744	(43276697)	+	(TCCTCCA)n	Simple_repeat	1	47	(0)	1611118
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
15	7.8	0.0	3.5	chr17	40099088	40099116	(43158325)	+	(GGCGG)n	Simple_repeat	1	29	(0)	1611348
20	13.3	0.0	4.4	chr17	40111892	40111936	(43145505)	+	(TCTCCC)n	Simple_repeat	1	45	(0)	1611366
232	33.8	0.0	0.0	chr17	40111947	40112017	(43145424)	C	MER131	DNA?	(139)	76	6	1611367
16	13.7	0.0	2.9	chr17	40121986	40122019	(43135422)	+	(GGC)n	Simple_repeat	1	34	(0)	1611391
20	26.4	5.1	1.9	chr17	40122194	40122291	(43135150)	+	G-rich	Low_complexity	1	103	(0)	1611392
106	1.8	3.5	0.0	chr17	40140318	40140430	(43117011)	+	(AC)n	Simple_repeat	1	117	(0)	1611417
18	19.4	0.0	0.0	chr17	40140646	40140686	(43116755)	+	(GCGGCA)n	Simple_repeat	1	41	(0)	1611418
17	11.2	0.0	8.7	chr17	40140786	40140838	(43116603)	+	(GGCGG)n	Simple_repeat	1	48	(0)	1611419
14	14.9	5.4	0.0	chr17	40191503	40191539	(43065902)	+	(GGCCGGA)n	Simple_repeat	1	39	(0)	1611532
305	28.3	7.5	0.0	chr17	40191740	40191838	(43065603)	C	MER91A	DNA/hAT-Tip100	(0)	196	90	1611533
2202	12.2	0.0	2.6	chr17	40409798	40410108	(42847333)	+	AluSz	SINE/Alu	1	303	(9)	1611989
242	31.4	19.3	6.7	chr17	40410210	40410943	(42846498)	C	L2b	LINE/L2	(230)	3157	2311	1611985
691	26.0	5.3	0.1	chr17	40490705	40490921	(42766520)	+	MIRb	SINE/MIR	9	248	(14)	1612157
184	30.4	2.8	4.2	chr17	41665811	41665882	(41591559)	+	L2c	LINE/L2	3316	3386	(1)	1613989
13	5.3	0.0	0.0	chr17	41688978	41688997	(41568444)	+	(CCG)n	Simple_repeat	1	20	(0)	1614055
399	22.6	2.0	2.8	chr17	41793587	41793709	(41463732)	C	MIR3	SINE/MIR	(132)	136	14	1614307
305	32.6	6.4	2.2	chr17	42019699	42019833	(41237608)	+	L2b	LINE/L2	3233	3373	(2)	1614783
19	15.2	2.5	9.8	chr17	42184176	42184255	(41073186)	+	(GGCGC)n	Simple_repeat	1	82	(0)	1615097
19	7.4	0.0	0.0	chr17	42184480	42184508	(41072933)	+	(GCA)n	Simple_repeat	1	29	(0)	1615098
430	28.7	0.8	1.6	chr17	42536759	42536882	(40720559)	+	MIRb	SINE/MIR	67	189	(79)	1615846
12	13.9	0.0	8.1	chr17	42609671	42609707	(40647734)	+	(GGCG)n	Simple_repeat	1	37	(0)	1615975
13	27.9	1.7	3.3	chr17	42681741	42681800	(40575641)	+	(TCCC)n	Simple_repeat	1	61	(0)	1616143
57	8.0	6.4	1.7	chr17	42682007	42682116	(40575325)	+	A-rich	Low_complexity	1	117	(0)	1616144
13	15.5	9.3	0.0	chr17	42745050	42745095	(40512346)	+	(GCGCCCC)n	Simple_repeat	1	50	(0)	1616277
19	28.9	5.4	0.0	chr17	42833431	42833522	(40423919)	+	(GCGA)n	Simple_repeat	1	97	(0)	1616449
20	22.3	3.5	0.0	chr17	43022172	43022228	(40235213)	+	(GGC)n	Simple_repeat	1	59	(0)	1616898
309	24.0	1.0	5.9	chr17	43034516	43034617	(40222824)	C	UCON88	Unknown	(1)	111	15	1616921
17	26.1	2.8	2.7	chr17	43545482	43545553	(39711888)	+	G-rich	Low_complexity	1	74	(0)	1618070
375	20.2	1.2	0.0	chr17	44279639	44279717	(38977724)	C	MIR	SINE/MIR	(131)	131	52	1619598
12	18.1	0.0	3.0	chr17	44314877	44314909	(38942532)	+	(CCCACC)n	Simple_repeat	1	33	(0)	1619679
24	9.9	5.0	4.8	chr17	44326805	44326864	(38930577)	+	G-rich	Low_complexity	1	63	(0)	1619701
199	36.2	3.5	2.8	chr17	44384624	44384765	(38872676)	C	MIR3	SINE/MIR	(0)	208	66	1619820
19	19.1	1.3	7.8	chr17	44384767	44384842	(38872599)	+	(GCGGTGG)n	Simple_repeat	1	77	(0)	1619821
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
20	10.0	0.0	0.0	chr17	45172715	45172747	(38084694)	+	(GGGGA)n	Simple_repeat	1	33	(0)	1621483
12	5.5	0.0	0.0	chr17	45248052	45248070	(38009371)	+	(GGA)n	Simple_repeat	1	19	(0)	1621666
6357	26.6	6.9	7.0	chr17	47065564	47068369	(36189072)	C	HERVIP10FH-int	LTR/ERV1	(259)	4843	2041	1625273
25	23.2	1.2	3.7	chr17	47649892	47649972	(35607469)	+	(TCCC)n	Simple_repeat	1	82	(0)	1626488
23	12.0	2.1	2.1	chr17	47650536	47650582	(35606859)	+	(CCTCCC)n	Simple_repeat	1	48	(0)	1626491
15	21.9	0.0	2.3	chr17	47694205	47694248	(35563193)	+	(GGCTGG)n	Simple_repeat	1	44	(0)	1626575
17	10.5	3.2	0.0	chr17	48101208	48101238	(35156203)	+	(CCG)n	Simple_repeat	1	32	(0)	1627295
19	0.0	0.0	0.0	chr17	48997363	48997383	(34260058)	+	(T)n	Simple_repeat	1	21	(0)	1629009
19	26.9	0.0	3.0	chr17	49225008	49225073	(34032368)	+	GA-rich	Low_complexity	1	66	(0)	1629464
18	24.8	0.0	1.9	chr17	49678139	49678192	(33579249)	+	(CCCCT)n	Simple_repeat	1	54	(0)	1630373
470	27.0	7.9	1.2	chr17	49850668	49850832	(33406609)	+	MIRb	SINE/MIR	92	268	(0)	1630685
13	9.8	0.0	0.0	chr17	49850834	49850855	(33406586)	+	(TGA)n	Simple_repeat	1	22	(0)	1630686
11	32.3	1.7	1.6	chr17	49850993	49851052	(33406389)	+	(CAGAAGG)n	Simple_repeat	1	61	(0)	1630687
14	15.0	2.4	4.8	chr17	50051304	50051344	(33206097)	+	G-rich	Low_complexity	1	42	(0)	1631073
11	13.3	5.7	2.7	chr17	50201182	50201216	(33056225)	+	(CTCCCG)n	Simple_repeat	1	37	(0)	1631308
16	18.5	0.0	6.1	chr17	50345987	50346035	(32911406)	+	(GGCCC)n	Simple_repeat	1	49	(0)	1631618
217	35.0	2.4	3.1	chr17	50347504	50347630	(32909811)	+	L3	LINE/CR1	3847	3972	(127)	1631620
562	28.7	1.9	5.4	chr17	50373525	50373690	(32883751)	C	MIRb	SINE/MIR	(31)	237	78	1631652
189	29.7	8.4	15.6	chr17	50547442	50547788	(32709653)	+	L2c	LINE/L2	3056	3387	(0)	1632014
14	17.1	1.6	9.4	chr17	50866466	50866528	(32390913)	+	(CCCCGG)n	Simple_repeat	1	64	(0)	1632611
276	25.0	3.5	3.5	chr17	51153888	51153974	(32103467)	+	L2c	LINE/L2	3299	3385	(2)	1633249
21	8.1	0.0	6.7	chr17	57874845	57874889	(25382552)	+	(GGGCGG)n	Simple_repeat	1	45	(0)	1644017
195	17.1	0.0	3.3	chr17	58085012	58085052	(25172389)	C	MIRc	SINE/MIR	(97)	111	75	1644419
198	31.0	2.8	0.0	chr17	58325203	58325271	(24932170)	C	MIRb	SINE/MIR	(3)	259	193	1644823
292	31.7	1.1	4.7	chr17	59107090	59107281	(24150160)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	1646446
335	32.5	5.6	6.6	chr17	59619923	59620103	(23637338)	+	L1MDb	LINE/L1	582	760	(5649)	1647644
12	19.9	0.0	0.0	chr17	59893146	59893174	(23364267)	+	(GGC)n	Simple_repeat	1	29	(0)	1648197
26	0.0	0.0	0.0	chr17	60149551	60149575	(23107866)	+	(CCACCC)n	Simple_repeat	1	25	(0)	1648678
11	21.5	6.0	1.9	chr17	61412641	61412690	(21844751)	+	(AGGCAC)n	Simple_repeat	1	53	(0)	1651017
33	0.0	0.0	2.8	chr17	63522999	63523034	(19734407)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1654861
23	28.3	3.8	1.8	chr17	63523162	63523267	(19734174)	+	GA-rich	Low_complexity	1	110	(0)	1654862
35	23.7	0.0	1.1	chr17	63774202	63774288	(19483153)	+	(GGC)n	Simple_repeat	1	87	(0)	1655334
2029	9.7	7.0	0.0	chr17	63848520	63848797	(19408644)	+	AluSx	SINE/Alu	1	299	(13)	1655457
12	22.6	1.9	5.7	chr17	63848843	63848894	(19408547)	+	(CCAG)n	Simple_repeat	1	53	(0)	1655458
12	18.8	2.6	2.6	chr17	64146158	64146195	(19111246)	+	G-rich	Low_complexity	1	39	(0)	1656000
2324	10.0	0.7	0.0	chr17	64976251	64976560	(18280881)	C	AluSx1	SINE/Alu	(0)	312	1	1657693
4576	16.3	3.5	3.4	chr17	67974293	67975154	(15282287)	C	MER21B	LTR/ERVL	(5)	863	1	1663218
9367	7.8	14.7	0.7	chr17	68207675	68209028	(15048413)	+	LTR12C	LTR/ERV1	3	1578	(1)	1663744
14	18.9	2.8	0.0	chr17	72030586	72030621	(11226820)	+	G-rich	Low_complexity	1	37	(0)	1669700
2984	6.7	0.8	0.5	chr17	73176309	73176682	(10080759)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1671792
60	0.0	0.0	0.0	chr17	73310744	73310794	(9946647)	+	(CA)n	Simple_repeat	1	51	(0)	1672050
183	41.4	0.0	0.0	chr17	73361160	73361246	(9896195)	+	MER5A	DNA/hAT-Charlie	63	149	(40)	1672155
189	33.9	0.0	0.0	chr17	73361555	73361613	(9895828)	+	L2b	LINE/L2	3278	3336	(39)	1672156
28	11.5	0.0	0.0	chr17	73952737	73952783	(9304658)	+	(CCTCCAA)n	Simple_repeat	1	47	(0)	1673235
548	26.5	1.4	0.0	chr17	73956438	73956573	(9300868)	+	MIR	SINE/MIR	124	261	(1)	1673239
248	25.0	7.5	7.5	chr17	73956565	73956698	(9300743)	C	MIR3	SINE/MIR	(74)	134	1	1673240
207	33.7	3.0	0.0	chr17	73957000	73957097	(9300344)	+	MIR3	SINE/MIR	30	130	(78)	1673241
1985	16.6	0.3	0.0	chr17	74007986	74008287	(9249154)	C	AluSz6	SINE/Alu	(1)	311	9	1673330
717	24.1	0.0	6.9	chr17	74008288	74008358	(9249083)	+	MER5A1	DNA/hAT-Charlie	107	166	(0)	1673329
295	27.8	8.7	2.5	chr17	74210435	74210552	(9046889)	+	MIRb	SINE/MIR	73	198	(70)	1673696
27	16.1	3.6	3.6	chr17	74213463	74213538	(9043903)	+	G-rich	Low_complexity	1	76	(0)	1673700
15	20.2	0.0	6.7	chr17	74852344	74852388	(8405053)	+	(CG)n	Simple_repeat	1	45	(0)	1674875
11	21.2	2.5	2.4	chr17	74852554	74852593	(8404848)	+	(GCAGCT)n	Simple_repeat	1	41	(0)	1674876
12	8.1	3.6	3.5	chr17	74852615	74852642	(8404799)	+	G-rich	Low_complexity	1	29	(0)	1674877
15	13.3	3.0	0.0	chr17	74893655	74893687	(8363754)	+	G-rich	Low_complexity	1	34	(0)	1674960
13	8.1	0.0	6.7	chr17	74923768	74923797	(8333644)	+	(GCGG)n	Simple_repeat	1	30	(0)	1675004
24	20.0	5.3	1.2	chr17	75896642	75896717	(7360724)	+	G-rich	Low_complexity	1	80	(0)	1676984
19	26.7	0.0	3.0	chr17	75897027	75897092	(7360349)	+	G-rich	Low_complexity	1	66	(0)	1676985
13	7.2	6.5	3.0	chr17	76080453	76080483	(7176958)	+	GA-rich	Low_complexity	1	33	(0)	1677349
14	8.6	10.8	0.0	chr17	76080498	76080540	(7176901)	+	(GGTGCAG)n	Simple_repeat	1	47	(0)	1677350
20	3.7	0.0	0.0	chr17	76121563	76121598	(7135843)	+	(CCGGG)n	Simple_repeat	1	36	(0)	1677426
15	16.0	4.5	2.2	chr17	76382892	76382935	(6874506)	+	GA-rich	Low_complexity	1	46	(0)	1677950
12	23.7	2.5	0.0	chr17	76540905	76540944	(6716497)	+	(TCCCCT)n	Simple_repeat	1	41	(0)	1678238
14	23.8	0.0	7.9	chr17	76585021	76585083	(6672358)	+	GA-rich	Low_complexity	1	63	(0)	1678329
13	14.8	5.1	2.4	chr17	76585150	76585188	(6672253)	+	G-rich	Low_complexity	1	41	(0)	1678330
281	31.6	0.0	2.1	chr17	77924827	77924923	(5332518)	C	UCON35	Unknown	(34)	97	3	1680893
1024	4.7	7.2	0.0	chr17	78254012	78254140	(5003301)	C	MER85	DNA/PiggyBac	(0)	139	1	1681497
20	26.2	4.4	4.2	chr17	78353008	78353058	(4904383)	+	(GCGGCC)n	Simple_repeat	23	118	(0)	1681715
14	14.2	3.2	0.0	chr17	78353182	78353212	(4904229)	+	(CGCC)n	Simple_repeat	1	32	(0)	1681717
15	12.0	5.3	2.5	chr17	79183459	79183496	(4073945)	+	(CTC)n	Simple_repeat	1	40	(0)	1683097
1906	13.6	4.4	0.3	chr17	79294313	79294598	(3962843)	C	AluSx1	SINE/Alu	(13)	299	2	1683246
36	8.7	0.0	0.0	chr17	79806053	79806101	(3451340)	+	(TG)n	Simple_repeat	1	49	(0)	1683959
57	3.5	0.0	0.0	chr17	79806102	79806159	(3451282)	+	(GA)n	Simple_repeat	1	58	(0)	1683960
357	24.7	11.2	2.0	chr17	79993064	79993216	(3264225)	C	MIR	SINE/MIR	(76)	186	18	1684260
837	12.2	0.9	0.0	chr17	80441002	80441116	(2816325)	+	AluJo	SINE/Alu	3	118	(194)	1685019
13	24.8	4.2	0.0	chr17	81636936	81636983	(1620458)	+	(CTGCCTC)n	Simple_repeat	1	50	(0)	1686548
1203	7.5	0.0	0.0	chr17	81711642	81711827	(1545614)	C	AluSx	SINE/Alu	(0)	312	136	1686674
261	11.1	0.0	0.0	chr17	81976561	81976605	(1280836)	+	Alu	SINE/Alu	2	46	(87)	1687001
12	23.8	2.2	2.1	chr17	82065754	82065799	(1191642)	+	G-rich	Low_complexity	1	47	(0)	1687089
13	19.4	4.9	0.0	chr17	82065901	82065941	(1191500)	+	(AGAGGTC)n	Simple_repeat	1	43	(0)	1687090
13	12.9	9.1	2.1	chr17	83051163	83051206	(206235)	+	G-rich	Low_complexity	1	48	(0)	1688527
986	8.1	0.0	0.0	chr18	158118	158240	(80215045)	C	AluJb	SINE/Alu	(12)	300	178	1689318
22	24.0	2.6	2.5	chr18	158379	158406	(80214879)	+	(CCCT)n	Simple_repeat	1	77	(0)	1689319
13	19.1	0.0	6.4	chr18	158407	158453	(80214832)	+	(CCCTCCA)n	Simple_repeat	1	47	(0)	1689320
1914	17.6	0.0	0.7	chr18	4119092	4119393	(76253892)	C	AluJo	SINE/Alu	(12)	300	1	1695574
262	16.4	5.2	1.4	chr18	4119582	4119655	(76253630)	C	MIR3	SINE/MIR	(98)	110	34	1695575
17	12.2	4.0	5.8	chr18	5197130	5197179	(75176106)	+	(GGCG)n	Simple_repeat	1	52	(0)	1696918
12	19.7	0.0	0.0	chr18	5891620	5891648	(74481637)	+	GA-rich	Low_complexity	1	29	(0)	1697830
494	31.6	4.3	11.8	chr18	8029309	8029810	(72343475)	+	L2b	LINE/L2	2922	3384	(3)	1700889
604	25.3	27.0	5.6	chr18	8717084	8717596	(71655689)	C	L2a	LINE/L2	(4)	3422	2755	1701835
25874	4.8	0.7	0.3	chr18	9264858	9270779	(71102506)	+	L1PA4	LINE/L1	2	6155	(0)	1702726
250	31.7	0.0	0.0	chr18	9334063	9334122	(71039163)	C	MER5A	DNA/hAT-Charlie	(67)	122	63	1702840
28028	2.3	0.3	0.0	chr18	10572669	10578678	(69794607)	C	L1PA2	LINE/L1	(0)	6155	126	1704717
32	11.8	0.0	1.8	chr18	12658110	12658166	(67715119)	+	(CGCCC)n	Simple_repeat	1	57	(0)	1707865
14	24.6	1.4	6.9	chr18	12658378	12658448	(67714837)	+	(GCGG)n	Simple_repeat	1	72	(0)	1707866
12913	8.7	1.4	6.2	chr18	21735088	21738525	(58634760)	+	L1P2	LINE/L1	3	3400	(3061)	1713214
13	20.6	4.9	4.7	chr18	24426651	24426711	(55946574)	+	(CCGCG)n	Simple_repeat	1	64	(0)	1717929
21610	9.6	1.1	0.8	chr18	25266453	25272922	(55100363)	+	L1PA7	LINE/L1	5	6468	(1)	1719120
573	15.4	0.9	0.0	chr18	25743647	25743750	(54629535)	+	L1PA10	LINE/L1	5	109	(6244)	1719757
9494	9.8	2.0	0.6	chr18	25743742	25745153	(54628132)	+	L1PA10	LINE/L1	471	1902	(4451)	1719757
12	15.2	2.4	7.0	chr18	26090392	26090433	(54282852)	+	(GGCCC)n	Simple_repeat	1	43	(0)	1720304
51	2.1	0.0	0.0	chr18	26550558	26550605	(53822680)	+	(AC)n	Simple_repeat	1	48	(0)	1721102
15	9.7	6.1	0.0	chr18	28175585	28175617	(52197668)	+	(CCAGCC)n	Simple_repeat	1	35	(0)	1723414
4264	10.3	2.0	5.3	chr18	31825567	31826168	(48547117)	C	LTR9B	LTR/ERV1	(0)	644	66	1728263
894	14.5	0.0	0.8	chr18	35266997	35267113	(45106172)	+	AluJo	SINE/Alu	1	116	(196)	1733076
28200	2.6	0.1	0.0	chr18	36235135	36241152	(44132133)	C	L1PA3	LINE/L1	(3)	6152	132	1734530
760	28.4	4.8	7.5	chr18	36583613	36583805	(43789480)	C	L1MCc	LINE/L1	(5955)	468	271	1734966
18444	10.8	1.9	0.3	chr18	42377271	42381885	(37991400)	C	L1PA17	LINE/L1	(1458)	4688	4	1742760
9319	3.0	0.2	0.2	chr18	45757513	45758581	(34614704)	C	MER11C	LTR/ERVK	(2)	1069	1	1747385
13	16.8	0.0	5.4	chr18	45837920	45837956	(34535329)	+	(CCCG)n	Simple_repeat	1	37	(0)	1747505
2343	8.9	0.0	0.0	chr18	46027879	46028170	(34345115)	+	AluSz	SINE/Alu	1	292	(20)	1747843
234	25.7	12.2	6.8	chr18	46098728	46098873	(34274412)	+	MER5A	DNA/hAT-Charlie	28	182	(7)	1747989
2586	4.8	0.0	1.9	chr18	46757180	46757489	(33615796)	+	AluSx4	SINE/Alu	1	304	(6)	1749204
27046	8.4	1.8	1.8	chr18	49215769	49223192	(31150093)	+	L1PA3	LINE/L1	9	8802	(502)	1753134
16	21.6	0.0	0.0	chr18	54358082	54358113	(26015172)	+	(T)n	Simple_repeat	1	32	(0)	1761121
922	29.4	6.5	2.7	chr18	54388668	54389140	(25984145)	C	LTR41B	LTR/ERVL	(2)	756	211	1761156
20	21.3	1.6	3.1	chr18	56638607	56638669	(23734616)	+	G-rich	Low_complexity	1	64	(0)	1764412
19	5.8	5.3	2.5	chr18	57803350	57803387	(22569898)	+	(GCTGGG)n	Simple_repeat	1	40	(0)	1766212
2267	11.6	0.3	0.6	chr18	58791086	58791396	(21581889)	C	AluSz	SINE/Alu	(2)	310	1	1767860
775	19.8	22.7	3.2	chr18	58791453	58791765	(21581520)	+	MLT1A0	LTR/ERVL-MaLR	1	374	(16)	1767861
9760	17.8	2.5	0.6	chr18	62000619	62002237	(18371048)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1	1772781
23333	7.2	1.1	0.2	chr18	67446583	67451464	(12921821)	C	L1P2	LINE/L1	(951)	5195	280	1780477
2630	20.3	9.8	1.1	chr18	69705855	69706502	(10666783)	C	MER67C	LTR/ERV1	(0)	711	1	1783562
239	27.6	8.9	9.3	chr18	73245660	73245895	(7127390)	+	MLT1K	LTR/ERVL-MaLR	203	437	(158)	1788298
515	32.2	8.3	4.4	chr18	76064894	76065580	(4307705)	+	L2a	LINE/L2	2703	3421	(5)	1791735
5769	10.2	3.2	3.0	chr18	79960166	79961063	(412222)	+	LTR5_Hs	LTR/ERVK	69	968	(0)	1795942
431	25.0	7.5	1.2	chr18	79988965	79989126	(384159)	+	MER65C	LTR/ERV1	1	173	(288)	1795994
14	14.7	8.9	0.0	chr19	531346	531391	(58086225)	+	(CCGCGCC)n	Simple_repeat	1	50	(0)	1797096
652	28.3	7.2	0.3	chr19	789226	789512	(57828104)	C	MLT1C	LTR/ERVL-MaLR	(154)	313	6	1797619
182	20.0	2.0	2.0	chr19	789549	789599	(57828017)	+	L2b	LINE/L2	3117	3167	(208)	1797620
1726	15.5	3.7	1.4	chr19	980894	981183	(57636433)	+	AluJr	SINE/Alu	1	297	(15)	1798023
1009	0.0	0.0	0.0	chr19	1021522	1021628	(57595988)	+	U6	snRNA	1	107	(0)	1798081
13	27.0	2.0	0.0	chr19	1113484	1113547	(57504069)	+	(CCACCCG)n	Simple_repeat	1	65	(0)	1798238
225	13.6	1.7	16.9	chr19	1479701	1479741	(57137875)	C	L1MB7	LINE/L1	(14)	6170	6141	1798841
2289	9.6	0.3	1.6	chr19	1479742	1480054	(57137562)	C	AluSx1	SINE/Alu	(3)	309	1	1798842
2404	9.0	0.0	0.6	chr19	1672580	1672891	(56944725)	C	AluSg	SINE/Alu	(0)	310	1	1799254
11	16.4	2.1	8.2	chr19	1748311	1748358	(56869258)	+	(GCCAG)n	Simple_repeat	1	49	(0)	1799453
2034	6.8	8.3	0.0	chr19	1897324	1897588	(56720028)	C	AluY	SINE/Alu	(20)	291	3	1799708
847	24.8	12.4	7.2	chr19	1904289	1904647	(56712969)	+	LTR38B	LTR/ERV1	171	556	(0)	1799728
276	9.5	0.0	0.0	chr19	1904766	1904807	(56712809)	+	AluSx	SINE/Alu	100	141	(161)	1799730
702	8.1	6.6	0.0	chr19	1904809	1904907	(56712709)	+	AluSx	SINE/Alu	194	299	(13)	1799730
14	13.6	0.0	5.6	chr19	2042205	2042240	(56575376)	+	(CGCCC)n	Simple_repeat	1	36	(0)	1800023
13	12.1	0.0	3.5	chr19	2050096	2050124	(56567492)	+	(CCCTG)n	Simple_repeat	1	29	(0)	1800034
21	19.8	0.0	0.0	chr19	2163757	2163802	(56453814)	+	(CGTG)n	Simple_repeat	1	46	(0)	1800272
17	27.5	1.3	4.0	chr19	2163789	2163863	(56453753)	+	G-rich	Low_complexity	1	76	(0)	1800273
13	21.2	1.8	7.0	chr19	2269498	2269553	(56348063)	+	(GGC)n	Simple_repeat	1	57	(0)	1800444
732	18.6	1.8	1.8	chr19	2740424	2740587	(55877029)	+	L1MA8	LINE/L1	6029	6192	(99)	1801562
15	21.2	0.0	4.3	chr19	3036342	3036388	(55581228)	+	(CTCC)n	Simple_repeat	1	47	(0)	1802227
17	17.6	5.6	5.3	chr19	3397520	3397590	(55220026)	+	(TGTCTC)n	Simple_repeat	1	75	(0)	1803156
570	30.5	1.8	0.0	chr19	3683509	3683675	(54933941)	C	MIR	SINE/MIR	(60)	202	33	1803772
237	26.5	3.7	0.0	chr19	3683689	3683811	(54933805)	C	L2a	LINE/L2	(299)	3127	3000	1803773
13	32.3	0.0	1.7	chr19	3721714	3721772	(54895844)	+	GA-rich	Low_complexity	1	59	(0)	1803877
1077	13.1	0.0	3.0	chr19	3822303	3822470	(54795146)	C	AluJr	SINE/Alu	(7)	305	143	1804092
22	27.1	1.1	4.2	chr19	3869029	3869056	(54748560)	+	(CCCCGCG)n	Simple_repeat	1	75	(21)	1804195
13	26.1	4.9	1.6	chr19	3869057	3869117	(54748499)	+	(CCCGC)n	Simple_repeat	1	64	(0)	1804196
22	27.1	1.1	4.2	chr19	3869118	3869123	(54748493)	+	(CCCCGCG)n	Simple_repeat	76	96	(0)	1804195
183	21.7	0.0	7.7	chr19	4061888	4061952	(54555664)	+	L3	LINE/CR1	3946	4005	(94)	1804646
24	25.9	9.0	1.7	chr19	4123955	4124120	(54493496)	+	(CGAGGC)n	Simple_repeat	1	181	(0)	1804793
267	25.6	3.5	0.0	chr19	4173320	4173409	(54444207)	C	MIR3	SINE/MIR	(53)	155	64	1804947
211	33.1	3.7	0.0	chr19	4375256	4375342	(54242274)	C	MIR1_Amn	SINE/MIR	(49)	159	70	1805459
426	33.1	1.9	3.8	chr19	4575769	4575990	(54041626)	C	MIRb	SINE/MIR	(40)	228	2	1805909
13	7.6	7.1	0.0	chr19	4610386	4610413	(54007203)	+	(CTGGC)n	Simple_repeat	1	30	(0)	1806004
14	16.3	1.8	8.6	chr19	4760056	4760112	(53857504)	+	G-rich	Low_complexity	1	58	(0)	1806381
396	24.4	1.1	0.0	chr19	4760464	4760553	(53857063)	+	MIRb	SINE/MIR	57	147	(121)	1806382
12	20.8	1.7	8.3	chr19	5137860	5137918	(53479698)	+	(CCCAG)n	Simple_repeat	1	60	(0)	1807235
19	21.2	0.0	0.0	chr19	5341053	5341096	(53276520)	+	(GGC)n	Simple_repeat	1	44	(0)	1807707
16	3.2	5.6	5.3	chr19	5404039	5404104	(53213512)	+	(AAAGA)n	Simple_repeat	1	66	(0)	1807889
22	28.0	4.7	0.0	chr19	5404105	5404120	(53213496)	+	GA-rich	Low_complexity	4	89	(0)	1807890
361	22.7	13.1	0.2	chr19	5803483	5803618	(52813998)	C	MIR	SINE/MIR	(15)	253	81	1808886
12	5.9	10.3	4.7	chr19	6516896	6516934	(52100682)	+	(TCCCGCTC)n	Simple_repeat	1	43	(0)	1810457
416	33.0	9.3	2.2	chr19	7521948	7522306	(51095310)	C	L2b	LINE/L2	(470)	2949	2563	1813138
1352	18.6	4.3	0.1	chr19	7562695	7562974	(51054642)	C	L1MC2	LINE/L1	(514)	5830	5540	1813209
205	39.7	2.3	0.8	chr19	7563149	7563275	(51054341)	+	L2c	LINE/L2	2911	3039	(348)	1813212
18	19.5	2.0	2.0	chr19	7903905	7903953	(50713663)	+	(GGC)n	Simple_repeat	1	50	(0)	1813951
35	0.0	2.4	2.4	chr19	8194240	8194280	(50423336)	+	(TATTTTTT)n	Simple_repeat	1	42	(0)	1814657
2125	10.6	0.3	0.3	chr19	8194281	8194563	(50423053)	C	AluSx	SINE/Alu	(29)	283	1	1814658
16	20.6	0.0	5.9	chr19	8367671	8367721	(50249895)	+	(CCTC)n	Simple_repeat	1	51	(0)	1815153
17	31.5	2.6	0.0	chr19	8609153	8609230	(50008386)	+	(TGTGTG)n	Simple_repeat	1	80	(0)	1815704
29	0.0	0.0	0.0	chr19	8609235	8609259	(50008357)	+	(TG)n	Simple_repeat	1	25	(0)	1815705
227	27.3	4.9	8.3	chr19	9584766	9584849	(49032767)	C	SVA_F	Retroposon/SVA	(910)	465	385	1817699
620	19.5	0.4	0.1	chr19	9584795	9584916	(49032700)	+	FLAM_C	SINE/Alu	5	129	(173)	1817700
1655	16.4	1.6	1.3	chr19	9769071	9769380	(48848236)	C	AluJr	SINE/Alu	(0)	312	2	1818054
603	28.9	9.3	0.5	chr19	9818236	9818440	(48799176)	C	MIR	SINE/MIR	(6)	256	32	1818190
13	11.1	3.2	3.1	chr19	10096519	10096549	(48521067)	+	(CAG)n	Simple_repeat	1	32	(0)	1818889
15	17.6	0.0	4.8	chr19	10432090	10432131	(48185485)	+	G-rich	Low_complexity	1	42	(0)	1819725
20	20.6	3.1	3.0	chr19	10432452	10432516	(48185100)	+	(GCCCCG)n	Simple_repeat	1	67	(0)	1819726
245	31.9	2.1	3.2	chr19	10625191	10625284	(47992332)	+	MIR3	SINE/MIR	54	146	(62)	1820298
215	32.5	6.6	2.6	chr19	10836752	10836868	(47780748)	+	MIR	SINE/MIR	112	233	(29)	1820785
2195	7.9	0.0	0.7	chr19	10878808	10879086	(47738530)	C	AluSx	SINE/Alu	(15)	297	21	1820908
1018	27.9	3.0	9.2	chr19	10879087	10879437	(47738179)	C	MLT1J	LTR/ERVL-MaLR	(159)	353	17	1820907
202	28.9	3.1	0.9	chr19	11155406	11155527	(47462089)	C	MIR1_Amn	SINE/MIR	(79)	189	63	1821596
14	16.7	2.9	0.0	chr19	11197889	11197922	(47419694)	+	G-rich	Low_complexity	1	35	(0)	1821708
788	27.9	8.0	5.8	chr19	11369336	11369667	(47247949)	C	L2a	LINE/L2	(237)	3189	2820	1822144
2343	10.5	0.0	0.3	chr19	11369989	11370294	(47247322)	+	AluSq2	SINE/Alu	1	305	(8)	1822154
1295	21.2	7.8	1.7	chr19	11597922	11598250	(47019366)	C	MER57E3	LTR/ERV1	(1)	486	138	1822765
38	8.5	0.0	0.0	chr19	12722562	12722612	(45895004)	+	(A)n	Simple_repeat	1	51	(0)	1825078
16	29.8	1.6	0.0	chr19	12806495	12806555	(45811061)	+	(GCAGCG)n	Simple_repeat	1	62	(0)	1825249
252	30.8	1.3	0.0	chr19	12848124	12848201	(45769415)	C	L2a	LINE/L2	(1)	3425	3347	1825352
817	28.1	3.1	8.8	chr19	12848250	12848337	(45769279)	+	L2a	LINE/L2	3101	3185	(241)	1825353
15	17.7	1.7	8.2	chr19	12946025	12946084	(45671532)	+	G-rich	Low_complexity	1	61	(0)	1825594
26	21.7	1.0	6.2	chr19	13118791	13118886	(45498730)	+	G-rich	Low_complexity	1	97	(0)	1825910
12	17.2	2.2	6.5	chr19	13151788	13151832	(45465784)	+	(CCCGCCG)n	Simple_repeat	1	46	(0)	1825985
12	7.5	6.7	3.1	chr19	13163845	13163874	(45453742)	+	(GCCCT)n	Simple_repeat	1	32	(0)	1826010
2321	7.7	0.3	0.0	chr19	13167138	13167423	(45450193)	C	AluSg7	SINE/Alu	(18)	291	5	1826018
601	29.1	9.1	0.8	chr19	13442130	13442392	(45175224)	C	LTR16C	LTR/ERVL	(24)	465	179	1826786
62	14.5	0.0	0.0	chr19	14204663	14204768	(44412848)	+	(AGAG)n	Simple_repeat	1	106	(0)	1828818
36	25.6	2.7	3.9	chr19	14248619	14248767	(44368849)	+	(CCCT)n	Simple_repeat	1	153	(0)	1828949
213	23.2	7.9	5.8	chr19	15222997	15223083	(43394533)	+	L2c	LINE/L2	3108	3196	(191)	1831420
14	5.0	0.0	0.0	chr19	15223174	15223194	(43394422)	+	(ATGA)n	Simple_repeat	1	21	(0)	1831421
229	16.7	0.0	0.0	chr19	15223195	15223230	(43394386)	C	tRNA-Gly-GGG	tRNA	(38)	36	1	1831422
38	0.0	0.0	0.0	chr19	15223242	15223276	(43394340)	+	(TGAG)n	Simple_repeat	1	35	(0)	1831423
2426	6.4	0.0	0.0	chr19	16110946	16111240	(42506376)	C	AluSg7	SINE/Alu	(13)	296	2	1833147
13	8.1	0.0	6.7	chr19	16472093	16472122	(42145494)	+	(GGCGG)n	Simple_repeat	1	30	(0)	1833999
36	0.0	0.0	0.0	chr19	16472404	16472434	(42145182)	+	(GT)n	Simple_repeat	1	31	(0)	1834000
23760	6.3	0.2	0.2	chr19	16961042	16964978	(41652638)	+	L1PA6	LINE/L1	2	3925	(2221)	1835168
15	20.5	1.8	5.3	chr19	17235213	17235268	(41382348)	+	G-rich	Low_complexity	1	57	(0)	1835809
749	28.3	14.1	4.9	chr19	17671903	17672330	(40945286)	+	MLT1J	LTR/ERVL-MaLR	1	474	(38)	1836968
259	27.8	7.0	0.1	chr19	17681582	17681688	(40935928)	+	L2a	LINE/L2	3262	3426	(0)	1836996
14	14.8	5.1	2.4	chr19	17686817	17686855	(40930761)	+	GA-rich	Low_complexity	1	41	(0)	1837006
198	27.5	19.3	0.7	chr19	17931846	17931988	(40685628)	C	L2b	LINE/L2	(260)	3115	2940	1837660
12	26.8	0.0	0.0	chr19	18255254	18255293	(40362323)	+	(CAGCAG)n	Simple_repeat	1	40	(0)	1838480
255	0.0	0.0	0.0	chr19	18288250	18288280	(40329336)	C	MIR	SINE/MIR	(119)	143	113	1838544
199	25.8	0.0	0.0	chr19	18292062	18292123	(40325493)	C	L2b	LINE/L2	(298)	3077	3016	1838554
70	13.3	3.8	3.6	chr19	18304375	18304534	(40313082)	+	GA-rich	Low_complexity	1	166	(0)	1838584
16	22.1	0.0	0.0	chr19	18374648	18374679	(40242937)	+	G-rich	Low_complexity	1	32	(0)	1838751
17	20.0	0.0	0.0	chr19	18429057	18429096	(40188520)	+	(GGCGCAG)n	Simple_repeat	1	40	(0)	1838879
15	13.7	0.0	0.0	chr19	18429232	18429255	(40188361)	+	(G)n	Simple_repeat	1	24	(0)	1838880
14	18.8	4.5	2.2	chr19	18940029	18940072	(39677544)	+	GA-rich	Low_complexity	1	46	(0)	1839875
15	24.8	2.1	0.0	chr19	19170557	19170604	(39447012)	+	(CCCTAA)n	Simple_repeat	1	49	(0)	1840407
227	35.5	4.2	3.7	chr19	19214940	19215103	(39402513)	+	MIR3	SINE/MIR	3	167	(41)	1840517
13	17.5	0.0	2.9	chr19	19405656	19405689	(39211927)	+	(GCCCC)n	Simple_repeat	1	34	(0)	1840930
654	19.2	5.0	4.4	chr19	20078679	20078836	(38538780)	+	LTR10B2	LTR/ERV1	206	364	(139)	1842073
1976	12.5	1.6	0.0	chr19	20078841	20079137	(38538479)	+	AluSg	SINE/Alu	1	302	(8)	1842074
2500	6.1	0.0	0.7	chr19	21329691	21329985	(37287631)	C	AluSp	SINE/Alu	(20)	293	1	1843855
1833	12.1	3.1	4.7	chr19	23273428	23273725	(35343891)	+	AluSz	SINE/Alu	1	293	(19)	1846448
2208	20.3	2.7	2.9	chr19	23273726	23273754	(35343862)	+	MER57E3	LTR/ERV1	459	481	(6)	1846447
496	27.9	9.7	0.0	chr19	29329842	29329981	(29287635)	C	MIRb	SINE/MIR	(27)	241	87	1850089
706	11.9	6.4	0.8	chr19	29811010	29811127	(28806489)	C	AluJr	SINE/Alu	(187)	125	1	1850904
14	20.0	2.4	2.3	chr19	29811263	29811304	(28806312)	+	(TGAA)n	Simple_repeat	1	43	(0)	1850905
13	17.1	3.0	0.0	chr19	32345689	32345721	(26271895)	+	G-rich	Low_complexity	1	34	(0)	1854639
15	24.3	4.1	4.0	chr19	33622842	33622914	(24994702)	+	(GTGC)n	Simple_repeat	1	76	(0)	1857062
325	26.2	10.5	0.7	chr19	33767821	33767966	(24849650)	+	MamRep1879	DNA/hAT-Tip100?	51	212	(4)	1857283
18	21.8	0.0	0.0	chr19	33906212	33906248	(24711368)	+	(C)n	Simple_repeat	1	37	(0)	1857522
825	13.7	0.0	0.8	chr19	34404033	34404156	(24213460)	+	FLAM_C	SINE/Alu	11	133	(10)	1858560
423	20.0	0.0	0.0	chr19	34404168	34404242	(24213374)	C	L1MC5a	LINE/L1	(635)	2142	2068	1858561
13	20.4	0.0	4.7	chr19	34428369	34428411	(24189205)	+	(CCGCCT)n	Simple_repeat	1	43	(0)	1858626
16	22.1	2.9	5.6	chr19	34428444	34428513	(24189103)	+	G-rich	Low_complexity	1	72	(0)	1858627
21	21.4	1.3	6.2	chr19	35041244	35041322	(23576294)	+	G-rich	Low_complexity	1	80	(0)	1859572
574	24.5	17.3	0.0	chr19	35247509	35247821	(23369795)	C	L2a	LINE/L2	(241)	3185	2797	1860019
17	22.9	1.5	5.8	chr19	35267593	35267660	(23349956)	+	GA-rich	Low_complexity	1	69	(0)	1860057
12	15.9	9.5	0.0	chr19	35797699	35797740	(22819876)	+	G-rich	Low_complexity	1	46	(0)	1861159
432	27.7	5.7	2.9	chr19	35797947	35798117	(22819499)	+	L2b	LINE/L2	3185	3360	(15)	1861160
1270	20.8	1.2	4.8	chr19	35828564	35828827	(22788789)	+	MER58B	DNA/hAT-Charlie	85	339	(2)	1861260
390	35.1	4.6	2.1	chr19	35963486	35963674	(22653942)	C	MIRb	SINE/MIR	(29)	239	46	1861563
249	25.0	5.6	4.5	chr19	35975596	35975683	(22641933)	C	MIR	SINE/MIR	(6)	256	168	1861595
295	19.3	0.0	0.0	chr19	35975979	35976035	(22641581)	C	L2a	LINE/L2	(0)	3426	3370	1861596
1724	14.1	0.7	1.8	chr19	36417941	36418217	(22199399)	C	AluJr	SINE/Alu	(38)	274	1	1862502
19	21.8	5.0	1.6	chr19	36604933	36604992	(22012624)	+	(CA)n	Simple_repeat	1	63	(0)	1862875
13	14.0	0.0	5.7	chr19	36605285	36605319	(22012297)	+	(GCGCAG)n	Simple_repeat	1	35	(0)	1862876
1341	8.7	0.0	2.3	chr19	37989663	37989835	(20627781)	C	AluSx	SINE/Alu	(9)	303	135	1865562
312	30.7	1.4	1.4	chr19	38175440	38175578	(20442038)	C	Charlie15a	DNA/hAT-Charlie	(3)	221	83	1866026
370	31.2	2.7	2.0	chr19	38175696	38175842	(20441774)	C	MIRb	SINE/MIR	(92)	176	29	1866027
12	12.6	0.0	3.6	chr19	38210686	38210713	(20406903)	+	(CCTTC)n	Simple_repeat	1	28	(0)	1866115
17	26.7	0.0	0.0	chr19	38228376	38228418	(20389198)	+	(CC)n	Simple_repeat	1	43	(0)	1866160
294	36.1	5.5	0.6	chr19	39139714	39139869	(19477747)	C	MER5B	DNA/hAT-Charlie	(6)	172	9	1868365
619	12.7	1.0	2.1	chr19	39403058	39403506	(19214110)	C	MSR1	Satellite	(0)	444	1	1869004
725	20.8	6.4	10.7	chr19	40512230	40512509	(18105107)	C	L2b	LINE/L2	(2)	3373	3107	1871281
27	5.5	0.0	0.0	chr19	40597140	40597177	(18020439)	+	(GGGCGG)n	Simple_repeat	1	38	(0)	1871496
397	32.2	6.5	7.8	chr19	40751530	40751903	(17865713)	+	L2b	LINE/L2	2957	3325	(50)	1871866
1684	18.5	0.3	2.4	chr19	40797814	40798111	(17819505)	+	AluJo	SINE/Alu	1	292	(20)	1871991
651	25.9	3.2	8.8	chr19	41189553	41189814	(17427802)	C	L2	LINE/L2	(610)	2809	2563	1872832
17	30.2	0.0	1.8	chr19	41225808	41225862	(17391754)	+	(TG)n	Simple_repeat	1	55	(0)	1872925
13	4.5	0.0	7.4	chr19	42075887	42075913	(16541703)	+	(GGA)n	Simple_repeat	1	27	(0)	1874519
1922	13.0	5.0	0.3	chr19	42143084	42143367	(16474249)	+	AluSz	SINE/Alu	1	298	(14)	1874673
523	28.3	7.6	6.4	chr19	42143368	42143409	(16474207)	+	L1ME3B	LINE/L1	6166	6207	(35)	1874672
546	32.7	6.7	2.3	chr19	42143647	42144000	(16473616)	+	L2a	LINE/L2	2941	3311	(115)	1874674
590	11.6	1.6	0.5	chr19	42370345	42370655	(16246961)	C	MSR1	Satellite	(1)	314	1	1875127
12	20.1	7.5	1.8	chr19	43527303	43527355	(15090261)	+	G-rich	Low_complexity	1	57	(0)	1877018
13	26.1	2.4	0.0	chr19	43619558	43619599	(14998017)	+	(CGG)n	Simple_repeat	1	43	(0)	1877255
445	24.7	23.8	1.7	chr19	43788874	43789108	(14828508)	+	L2a	LINE/L2	3121	3423	(3)	1877678
15	19.9	0.0	4.5	chr19	44808301	44808344	(13809272)	+	G-rich	Low_complexity	1	44	(0)	1879682
12	23.6	7.6	1.4	chr19	44844643	44844708	(13772908)	+	(CCCGCCT)n	Simple_repeat	1	71	(0)	1879783
14	18.3	2.7	0.0	chr19	44844880	44844916	(13772700)	+	(AGCCC)n	Simple_repeat	1	38	(0)	1879784
56	25.0	4.0	1.1	chr19	44848657	44848829	(13768787)	+	(CT)n	Simple_repeat	1	180	(0)	1879792
12	13.3	2.7	5.3	chr19	45498864	45498900	(13118716)	+	(GCGAGC)n	Simple_repeat	1	38	(0)	1881472
12	26.9	0.0	0.0	chr19	45529173	45529212	(13088404)	+	(CGCCTG)n	Simple_repeat	1	40	(0)	1881545
217	31.4	6.8	7.5	chr19	45643883	45644074	(12973542)	C	MIR1_Amn	SINE/MIR	(14)	194	1	1881877
12	18.3	0.0	3.0	chr19	45770724	45770756	(12846860)	+	(CCCGCC)n	Simple_repeat	1	33	(0)	1882223
591	24.4	5.2	2.4	chr19	45927752	45927919	(12689697)	+	LTR67B	LTR/ERVL	2	174	(446)	1882602
246	28.9	4.0	2.0	chr19	45928008	45928106	(12689510)	+	LTR67B	LTR/ERVL	412	512	(108)	1882602
230	26.7	15.9	6.2	chr19	46022211	46022402	(12595214)	C	MIR	SINE/MIR	(32)	230	17	1882852
416	27.2	12.6	3.9	chr19	46373673	46373937	(12243679)	C	L2b	LINE/L2	(47)	3340	3026	1883505
276	27.6	7.0	4.6	chr19	46413580	46413731	(12203885)	C	LTR104_Mam	LTR/Gypsy	(698)	811	656	1883596
15	18.6	2.1	4.2	chr19	46416659	46416705	(12200911)	+	(GGCGGA)n	Simple_repeat	1	48	(0)	1883605
265	34.6	3.0	6.2	chr19	46611020	46611333	(12006283)	C	L2b	LINE/L2	(161)	3214	2910	1884101
267	26.2	0.0	1.5	chr19	46639934	46639999	(11977617)	C	MIRb	SINE/MIR	(82)	186	122	1884165
335	33.1	12.8	0.7	chr19	46640059	46640195	(11977421)	+	L2a	LINE/L2	2372	2527	(892)	1884166
24	21.9	7.2	3.7	chr19	46659280	46659404	(11958212)	+	G-rich	Low_complexity	1	134	(0)	1884226
571	18.2	7.2	4.1	chr19	46851218	46851338	(11766278)	C	AluJr4	SINE/Alu	(179)	133	9	1884739
1696	15.1	1.0	9.5	chr19	47013592	47013916	(11603700)	+	AluJr	SINE/Alu	1	297	(15)	1885062
29	30.4	2.4	1.6	chr19	47112440	47112563	(11505053)	+	(GGC)n	Simple_repeat	1	127	(0)	1885280
30	29.3	0.8	5.3	chr19	47242925	47243056	(11374560)	+	(TG)n	Simple_repeat	1	133	(0)	1885631
34	21.6	3.3	0.0	chr19	47243283	47243373	(11374243)	+	(CCCGC)n	Simple_repeat	1	94	(0)	1885632
234	23.1	9.1	2.3	chr19	47391686	47391818	(11225798)	+	L2c	LINE/L2	3022	3164	(223)	1886065
2032	12.5	1.0	0.3	chr19	47391911	47392199	(11225417)	C	AluJr	SINE/Alu	(21)	291	1	1886066
1465	18.4	8.4	1.7	chr19	47399537	47399824	(11217792)	+	AluJo	SINE/Alu	1	309	(3)	1886071
36	28.8	5.8	0.6	chr19	47471853	47472024	(11145592)	+	GA-rich	Low_complexity	1	182	(0)	1886246
32	3.2	0.0	0.0	chr19	47472195	47472226	(11145390)	+	(AC)n	Simple_repeat	1	32	(0)	1886247
17	11.6	0.0	7.0	chr19	47778598	47778640	(10838976)	+	(CCTCCGC)n	Simple_repeat	1	43	(0)	1887045
12	7.2	10.3	0.0	chr19	47848998	47849026	(10768590)	+	(CCT)n	Simple_repeat	1	32	(0)	1887232
249	28.3	16.4	0.8	chr19	47849091	47849218	(10768398)	C	MIR	SINE/MIR	(22)	240	89	1887233
935	18.1	0.6	0.0	chr19	47849932	47850091	(10767525)	+	AluJo	SINE/Alu	140	300	(12)	1887236
2271	11.7	0.3	0.0	chr19	48062329	48062636	(10554980)	+	AluSx1	SINE/Alu	1	309	(3)	1887840
15	22.3	2.0	2.0	chr19	48398571	48398619	(10218997)	+	(CCGCGG)n	Simple_repeat	1	50	(0)	1888659
19	31.0	1.1	3.2	chr19	48398869	48398960	(10218656)	+	G-rich	Low_complexity	1	93	(0)	1888660
2289	8.6	0.3	5.2	chr19	48400784	48401110	(10216506)	+	AluSx	SINE/Alu	1	311	(1)	1888662
380	25.4	6.0	5.3	chr19	48416217	48416349	(10201267)	+	MIRb	SINE/MIR	34	167	(101)	1888705
13	30.2	0.0	4.5	chr19	48634580	48634645	(9982971)	+	(CCCGCC)n	Simple_repeat	1	66	(0)	1889251
14	10.7	3.1	3.0	chr19	48637382	48637413	(9980203)	+	GA-rich	Low_complexity	1	33	(0)	1889254
14	21.7	0.0	10.3	chr19	48646681	48646758	(9970858)	+	(GGAGCG)n	Simple_repeat	1	78	(0)	1889273
659	8.8	1.3	0.6	chr19	48754863	48755280	(9862336)	+	MSR1	Satellite	1	420	(0)	1889518
780	8.7	0.7	0.0	chr19	48834341	48835779	(9781837)	C	MSR1	Satellite	(26)	1448	1	1889737
245	24.0	1.3	2.6	chr19	48933823	48933899	(9683717)	C	MSR1	Satellite	(35)	76	1	1890003
4475	13.1	1.6	0.8	chr19	48933973	48934706	(9682910)	+	LTR5B	LTR/ERVK	1	740	(262)	1890004
294	20.7	2.7	2.5	chr19	49157903	49158099	(9459517)	C	MSR1	Satellite	(0)	197	1	1890486
13	19.8	0.0	2.7	chr19	49361581	49361617	(9255999)	+	(CTCCC)n	Simple_repeat	1	37	(0)	1890948
2221	12.0	0.0	0.3	chr19	49452714	49453021	(9164595)	C	AluSx	SINE/Alu	(5)	307	1	1891124
2373	7.4	0.0	4.9	chr19	49495609	49495933	(9121683)	C	AluSx1	SINE/Alu	(3)	309	1	1891222
220	29.2	20.4	0.0	chr19	49500209	49500321	(9117295)	C	MIRb	SINE/MIR	(122)	146	5	1891226
1901	12.5	5.1	0.4	chr19	49585516	49585796	(9031820)	+	AluSx	SINE/Alu	1	295	(17)	1891473
13	18.0	6.8	0.0	chr19	49808939	49808982	(8808634)	+	G-rich	Low_complexity	1	47	(0)	1891992
12	19.3	0.0	5.1	chr19	49929309	49929347	(8688269)	+	(CCCGCTC)n	Simple_repeat	1	39	(0)	1892228
1859	11.0	6.5	0.7	chr19	50026289	50026580	(8591036)	+	AluSx1	SINE/Alu	3	312	(0)	1892448
16	13.2	0.0	0.0	chr19	50315645	50315669	(8301947)	+	(G)n	Simple_repeat	1	25	(0)	1893258
15	23.9	0.0	3.2	chr19	50315689	50315737	(8301879)	+	G-rich	Low_complexity	1	47	(0)	1893259
2154	11.6	1.7	0.0	chr19	50316460	50316751	(8300865)	+	AluSx1	SINE/Alu	2	298	(14)	1893260
12	28.1	1.7	3.3	chr19	50500436	50500494	(8117122)	+	(TCCCCC)n	Simple_repeat	1	60	(0)	1893651
189	35.2	7.8	3.6	chr19	50556523	50556743	(8060873)	+	L2a	LINE/L2	3194	3424	(2)	1893780
13	13.6	4.3	6.2	chr19	50725315	50725360	(7892256)	+	(GCCCA)n	Simple_repeat	1	48	(0)	1894171
383	20.5	1.1	0.8	chr19	50805116	50805262	(7812354)	C	MSR1	Satellite	(17)	147	1	1894379
14	13.7	0.0	5.6	chr19	51064931	51064966	(7552650)	+	(CTCCCC)n	Simple_repeat	1	36	(0)	1894948
12	12.0	3.7	0.0	chr19	51065080	51065106	(7552510)	+	(GGCAG)n	Simple_repeat	1	28	(0)	1894949
217	29.5	5.2	5.8	chr19	51690676	51690812	(6926804)	+	MIR3	SINE/MIR	58	193	(15)	1896053
12	14.7	3.3	0.0	chr19	51691132	51691161	(6926455)	+	(CCAGCC)n	Simple_repeat	1	31	(0)	1896054
96	28.0	5.8	1.5	chr19	51691175	51691606	(6926010)	+	GA-rich	Low_complexity	1	457	(0)	1896055
6569	11.8	0.7	0.9	chr19	51905692	51906661	(6710955)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	1896459
12	19.6	0.0	5.1	chr19	52190438	52190476	(6427140)	+	(GGCTGG)n	Simple_repeat	1	39	(0)	1896965
2019	11.2	1.3	2.3	chr19	52190856	52191160	(6426456)	C	AluSz	SINE/Alu	(10)	302	1	1896966
1656	14.9	8.2	0.0	chr19	52500404	52500671	(6116945)	C	AluSz	SINE/Alu	(9)	303	12	1897568
2355	11.0	12.8	4.9	chr19	52500672	52500851	(6116765)	C	MER4A1	LTR/ERV1	(304)	168	5	1897567
189	20.0	16.7	0.0	chr19	53520507	53520551	(5097065)	C	OldhAT1	DNA/hAT-Ac	(929)	1919	1866	1899507
2297	22.1	5.6	5.2	chr19	53594764	53594991	(5022625)	C	L1P4b	LINE/L1	(6626)	708	467	1899667
1871	24.2	16.4	5.4	chr19	53594992	53595634	(5021982)	C	LTR8A	LTR/ERV1	(0)	727	1	1899671
2228	11.2	0.7	0.3	chr19	53595866	53596160	(5021456)	+	AluSq2	SINE/Alu	1	296	(17)	1899672
2297	22.1	5.6	5.2	chr19	53596161	53596369	(5021247)	C	L1P4b	LINE/L1	(7082)	252	36	1899667
1378	1.9	0.0	0.0	chr19	53596370	53596526	(5021090)	+	L1PA3	LINE/L1	5997	6153	(2)	1899673
37	19.4	1.2	0.0	chr19	53908789	53908870	(4708746)	+	(CTCTCT)n	Simple_repeat	1	83	(0)	1900558
11	0.0	13.3	2.9	chr19	53908928	53908957	(4708659)	+	(CTGTCT)n	Simple_repeat	1	34	(0)	1900559
16	23.6	0.0	0.0	chr19	53943481	53943515	(4674101)	+	G-rich	Low_complexity	1	35	(0)	1900627
29	33.2	2.0	4.5	chr19	53959308	53959504	(4658112)	+	(CTCC)n	Simple_repeat	1	201	(0)	1900676
650	12.5	1.6	0.5	chr19	54095477	54095856	(4521760)	C	MSR1	Satellite	(8)	384	1	1901066
2064	7.0	1.5	0.0	chr19	55141524	55141779	(3475837)	C	AluSq2	SINE/Alu	(53)	260	1	1903090
210	32.8	6.4	2.2	chr19	55178612	55178745	(3438871)	+	MIR3	SINE/MIR	61	200	(8)	1903169
33	0.0	0.0	0.0	chr19	55178754	55178784	(3438832)	+	(T)n	Simple_repeat	1	31	(0)	1903170
1779	11.8	10.6	0.0	chr19	55216200	55216462	(3401154)	C	AluSx	SINE/Alu	(15)	297	4	1903254
2275	7.8	0.3	1.4	chr19	55217459	55217753	(3399863)	+	AluSx1	SINE/Alu	1	292	(20)	1903255
628	25.3	2.5	0.0	chr19	55342528	55342681	(3274935)	C	MIR3	SINE/MIR	(3)	205	48	1903547
236	25.8	2.2	8.2	chr19	55550515	55550611	(3067005)	+	MIRb	SINE/MIR	118	208	(60)	1903978
32	17.5	7.6	3.9	chr19	55550615	55550732	(3066884)	+	(AT)n	Simple_repeat	1	127	(0)	1903979
12	13.2	9.3	2.1	chr19	55580979	55581021	(3036595)	+	G-rich	Low_complexity	1	47	(0)	1904074
268	16.9	4.4	5.8	chr19	55581165	55581233	(3036383)	C	L2a	LINE/L2	(0)	3426	3359	1904075
363	32.0	8.6	3.4	chr19	55585654	55585918	(3031698)	C	L2	LINE/L2	(453)	2966	2687	1904094
13	22.0	2.7	0.0	chr19	55640125	55640161	(2977455)	+	(GCT)n	Simple_repeat	1	38	(0)	1904217
195	32.9	1.4	0.0	chr19	55640488	55640557	(2977059)	+	MIRc	SINE/MIR	112	182	(86)	1904218
11	27.4	1.6	4.8	chr19	56567606	56567667	(2049949)	+	(GCGTGC)n	Simple_repeat	1	63	(0)	1906004
3248	17.8	2.2	7.3	chr19	57820086	57820814	(796802)	C	LTR8	LTR/ERV1	(0)	691	1	1908383
477	13.1	0.0	2.3	chr19	58009991	58010086	(607530)	+	FLAM_C	SINE/Alu	1	72	(61)	1908697
14	26.6	3.7	0.0	chr19	58059315	58059368	(558248)	+	(GCCAG)n	Simple_repeat	1	56	(0)	1908790
11	24.3	5.5	1.7	chr19	58573164	58573218	(44398)	+	(CCTTCC)n	Simple_repeat	1	58	(0)	1909747
25999	5.8	0.5	0.1	chr2	1382735	1388849	(240804680)	C	L1PA5	LINE/L1	(7)	6147	11	1912156
12	20.2	4.1	3.9	chr2	1591946	1591994	(240601535)	+	(GGCTGG)n	Simple_repeat	1	51	(0)	1912333
250	11.1	2.2	0.0	chr2	2613547	2613591	(239579938)	C	L1M6	LINE/L1	(5901)	595	550	1913479
194	27.3	0.0	0.0	chr2	2613680	2613723	(239579806)	+	LFSINE_Vert	SINE/tRNA	358	401	(58)	1913480
57	30.2	2.5	3.5	chr2	2848824	2849106	(239344423)	+	GA-rich	Low_complexity	1	290	(0)	1913736
17050	9.9	2.3	3.0	chr2	7875015	7878438	(234315091)	C	HERVH-int	LTR/ERV1	(4726)	2987	1	1920561
660	29.2	9.4	5.9	chr2	7879035	7879456	(234314073)	+	LTR16	LTR/ERVL	1	438	(0)	1920562
374	26.3	10.4	2.0	chr2	8573294	8573475	(233620054)	C	MIRb	SINE/MIR	(28)	234	30	1921587
2397	4.7	3.3	2.4	chr2	8585521	8585817	(233607712)	C	AluY	SINE/Alu	(11)	300	1	1921604
462	31.7	4.6	4.6	chr2	8585818	8585889	(233607640)	C	MIRb	SINE/MIR	(163)	105	32	1921603
13	16.6	2.2	6.4	chr2	9004038	9004083	(233189446)	+	G-rich	Low_complexity	1	47	(0)	1922160
21	14.1	3.3	4.8	chr2	10043495	10043554	(232149975)	+	(CCGCC)n	Simple_repeat	1	62	(0)	1924068
11	11.7	7.3	4.5	chr2	10043901	10043941	(232149588)	+	G-rich	Low_complexity	1	44	(0)	1924069
17	18.1	0.0	7.0	chr2	10448011	10448067	(231745462)	+	(CCGCGGC)n	Simple_repeat	1	57	(0)	1924772
322	17.9	1.5	0.0	chr2	11130300	11130366	(231063163)	C	MIR3	SINE/MIR	(108)	100	33	1926075
53	0.0	0.0	0.0	chr2	11132998	11133042	(231060487)	+	(CA)n	Simple_repeat	1	45	(0)	1926079
22	2.7	7.9	0.0	chr2	15943382	15943419	(226250110)	+	(TTTTCT)n	Simple_repeat	1	41	(0)	1933621
14693	4.1	0.0	0.3	chr2	19161875	19164400	(223029129)	C	L1PA3	LINE/L1	(3262)	2884	366	1938467
19721	3.2	0.3	0.0	chr2	19164394	19167658	(223025871)	+	L1PA3	LINE/L1	2878	6152	(3)	1938467
13	18.5	2.0	6.0	chr2	20188930	20188978	(222004551)	+	(CCATCC)n	Simple_repeat	1	50	(0)	1939916
41	2.4	2.3	0.0	chr2	20446571	20446613	(221746916)	+	(GT)n	Simple_repeat	1	44	(0)	1940393
246	26.2	8.1	0.0	chr2	23690163	23690242	(218503287)	C	MamTip2	DNA/hAT-Tip100	(153)	152	66	1944695
14	27.2	1.4	5.4	chr2	25315134	25315206	(216878323)	+	(CCCTTC)n	Simple_repeat	1	74	(0)	1947710
504	26.3	4.3	1.9	chr2	25342754	25342912	(216850617)	+	L3	LINE/CR1	3929	4091	(8)	1947761
250	33.6	12.1	1.7	chr2	25673989	25674276	(216519253)	C	L2c	LINE/L2	(38)	3349	3028	1948351
15	31.6	0.0	3.0	chr2	26179914	26179980	(216013549)	+	G-rich	Low_complexity	1	67	(0)	1949493
30	17.0	0.0	0.0	chr2	26245248	26245300	(215948229)	+	(GT)n	Simple_repeat	1	53	(0)	1949599
13	22.5	0.0	0.0	chr2	26692985	26693020	(215500509)	+	(AGCGGC)n	Simple_repeat	1	36	(0)	1950405
14	27.0	2.6	5.0	chr2	26693172	26693249	(215500280)	+	G-rich	Low_complexity	1	80	(0)	1950406
6908	10.5	0.5	4.4	chr2	26749865	26750871	(215442658)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	1950531
17	10.4	4.4	4.3	chr2	26971130	26971174	(215222355)	+	(CCTCCCT)n	Simple_repeat	1	47	(0)	1950981
1889	9.3	0.0	3.2	chr2	27032377	27032655	(215160874)	+	AluSx1	SINE/Alu	1	270	(42)	1951082
15	12.2	0.0	0.0	chr2	27032665	27032691	(215160838)	+	(CAAT)n	Simple_repeat	1	27	(0)	1951083
33	0.0	0.0	0.0	chr2	27086722	27086752	(215106777)	+	(CGGGG)n	Simple_repeat	1	31	(0)	1951151
13	25.6	3.4	3.3	chr2	27217329	27217387	(214976142)	+	(CCG)n	Simple_repeat	1	61	(0)	1951395
14	31.9	0.0	0.0	chr2	27442515	27442568	(214750961)	+	(CCCGC)n	Simple_repeat	1	54	(0)	1951833
332	32.0	6.2	5.1	chr2	28811152	28811309	(213382220)	+	L1M4b	LINE/L1	458	617	(6250)	1954259
15	11.2	0.0	3.2	chr2	31138684	31138714	(211054815)	+	(GGGGC)n	Simple_repeat	1	31	(0)	1958027
322	30.1	7.6	2.0	chr2	31256844	31256992	(210936537)	+	MIRc	SINE/MIR	54	211	(57)	1958242
16362	4.7	1.6	0.2	chr2	31496362	31500000	(210693529)	+	L1P1	LINE/L1	5	3700	(2446)	1958578
16	22.7	3.5	1.7	chr2	32011040	32011097	(210182432)	+	(GGCGCAG)n	Simple_repeat	1	60	(0)	1959290
1105	26.3	9.2	14.5	chr2	36824131	36824374	(205369155)	+	LTR75B	LTR/ERVL	330	600	(8)	1966597
300	34.6	5.4	2.5	chr2	39124616	39124778	(203068751)	+	L2	LINE/L2	2787	2954	(465)	1970603
43	13.8	0.0	0.0	chr2	39779337	39779409	(202414120)	+	(GGGAGA)n	Simple_repeat	1	73	(0)	1971734
13	5.2	0.0	0.0	chr2	41837023	41837042	(200356487)	+	(TGG)n	Simple_repeat	1	20	(0)	1974493
487	30.4	1.9	1.2	chr2	41837187	41837346	(200356183)	+	MER5A	DNA/hAT-Charlie	1	161	(28)	1974494
12	16.4	0.0	7.5	chr2	42072866	42072905	(200120624)	+	(GCAGGA)n	Simple_repeat	1	40	(0)	1974899
14	14.8	2.4	4.8	chr2	42072966	42073006	(200120523)	+	(AGGCC)n	Simple_repeat	1	42	(0)	1974900
269	25.7	6.9	3.1	chr2	42907262	42907398	(199286131)	C	MIR	SINE/MIR	(79)	183	45	1976525
26624	2.5	0.1	0.0	chr2	42989476	42995502	(199198027)	+	L1PA3	LINE/L1	298	6326	(2)	1976678
19	17.6	2.2	0.0	chr2	43180025	43180069	(199013460)	+	(CCCCCA)n	Simple_repeat	1	46	(0)	1977050
232	27.5	9.0	1.5	chr2	44016224	44016356	(198177173)	+	MamRep564	Unknown	88	231	(126)	1978409
11	13.4	4.2	8.0	chr2	44362005	44362052	(197831477)	+	(GAGACGC)n	Simple_repeat	1	50	(0)	1979091
13	13.2	0.0	0.0	chr2	47238137	47238161	(194955368)	+	(CTC)n	Simple_repeat	1	25	(0)	1983604
14	7.8	3.7	0.0	chr2	47369093	47369119	(194824410)	+	(GGGGC)n	Simple_repeat	1	28	(0)	1983925
306	22.2	2.1	5.5	chr2	47369285	47369484	(194824045)	+	LTR41B	LTR/ERVL	252	444	(314)	1983926
923	18.9	10.0	3.6	chr2	47662380	47662631	(194530898)	+	MER34B-int	LTR/ERV1	599	868	(4068)	1984497
421	14.1	4.9	0.0	chr2	47662604	47662681	(194530848)	+	MER34B-int	LTR/ERV1	1035	1116	(4240)	1984497
261	22.9	9.8	0.0	chr2	47662682	47662764	(194530765)	+	MER67D	LTR/ERV1	120	211	(303)	1984498
934	26.7	3.8	1.6	chr2	47662799	47663103	(194530426)	+	MER34B-int	LTR/ERV1	1218	1529	(3827)	1984497
1170	13.8	6.1	2.0	chr2	47696085	47696404	(194497125)	C	LTR49	LTR/ERV1	(0)	595	221	1984576
3676	9.5	12.9	12.0	chr2	47696405	47696803	(194496726)	+	LTR8A	LTR/ERV1	1	362	(365)	1984580
13	17.9	7.4	3.5	chr2	48314247	48314300	(193879229)	+	(GCC)n	Simple_repeat	1	58	(0)	1985746
24	12.3	2.3	0.0	chr2	48440801	48440844	(193752685)	+	(GGC)n	Simple_repeat	1	45	(0)	1985972
14042	11.1	4.2	4.1	chr2	48766181	48768026	(193425503)	C	L1PA7	LINE/L1	(4318)	2039	181	1986508
38	16.8	4.6	0.0	chr2	51032140	51032226	(191161303)	+	GA-rich	Low_complexity	1	91	(0)	1989561
50	0.0	0.0	0.0	chr2	51032511	51032553	(191160976)	+	(AG)n	Simple_repeat	1	43	(0)	1989562
14	5.0	0.0	0.0	chr2	55617375	55617395	(186576134)	+	(GGC)n	Simple_repeat	1	21	(0)	1996248
24450	6.7	0.4	0.0	chr2	55831544	55837683	(186355846)	C	L1PA6	LINE/L1	(11)	6143	1	1996646
13	17.5	0.0	2.9	chr2	55923616	55923649	(186269880)	+	(CTCAC)n	Simple_repeat	1	34	(0)	1996753
18	23.8	3.5	1.7	chr2	55923816	55923873	(186269656)	+	GA-rich	Low_complexity	1	60	(0)	1996754
27489	2.8	0.3	0.0	chr2	57418711	57424719	(184768810)	+	L1PA2	LINE/L1	124	6148	(7)	1998534
26632	4.3	0.4	0.7	chr2	58171615	58177788	(184015741)	+	L1PA3	LINE/L1	2	6154	(1)	1999435
11	16.7	7.2	6.8	chr2	60552525	60552593	(181640936)	+	(CCGTCC)n	Simple_repeat	1	74	(0)	2002580
2390	7.5	1.6	0.7	chr2	61888897	61889202	(180304327)	C	AluSx1	SINE/Alu	(3)	309	1	2005406
202	21.7	2.8	9.2	chr2	63059414	63059489	(179134040)	+	MIR	SINE/MIR	60	130	(132)	2007381
328	33.6	8.8	9.1	chr2	63059510	63059784	(179133745)	C	L1M4b	LINE/L1	(6375)	492	219	2007382
15	13.2	0.0	5.4	chr2	64404560	64404596	(177788933)	+	(TCCCTC)n	Simple_repeat	1	37	(0)	2009296
18	22.0	0.0	5.2	chr2	64653805	64653862	(177539667)	+	(GGC)n	Simple_repeat	1	58	(0)	2009702
14	14.6	5.0	2.4	chr2	64767982	64768028	(177425501)	+	(CGCCCG)n	Simple_repeat	1	48	(0)	2009902
17	18.4	0.0	0.0	chr2	65580138	65580174	(176613355)	+	(CCTC)n	Simple_repeat	1	37	(0)	2011573
28037	2.6	0.2	0.1	chr2	66391131	66397150	(175796379)	+	L1PA2	LINE/L1	125	6155	(0)	2012735
24429	4.9	1.0	0.0	chr2	66642649	66648743	(175544786)	C	L1PA4	LINE/L1	(0)	6155	1	2013005
11	20.5	2.9	0.0	chr2	68252737	68252770	(173940759)	+	G-rich	Low_complexity	1	35	(0)	2015306
211	21.2	0.4	4.3	chr2	68362303	68362367	(173831162)	+	L2c	LINE/L2	3309	3383	(4)	2015504
16668	4.2	0.0	0.1	chr2	68677862	68680074	(173513455)	C	L1PA3	LINE/L1	(3811)	2335	125	2015930
13	25.4	0.0	4.0	chr2	69386870	69386919	(172806610)	+	(CCCCGC)n	Simple_repeat	1	50	(0)	2016982
13	26.3	1.7	3.4	chr2	69387003	69387060	(172806469)	+	(CGGCCCC)n	Simple_repeat	1	59	(0)	2016983
16	18.9	2.9	7.0	chr2	69387229	69387297	(172806232)	+	(CCGCCGC)n	Simple_repeat	1	71	(0)	2016984
307	31.1	9.5	4.4	chr2	70085548	70085755	(172107774)	+	MIR	SINE/MIR	38	250	(12)	2018347
14	20.2	5.2	6.2	chr2	70142568	70142644	(172050885)	+	(CCCGTC)n	Simple_repeat	1	81	(0)	2018487
14	14.1	0.0	3.0	chr2	70302019	70302051	(171891478)	+	(CCGCG)n	Simple_repeat	1	33	(0)	2018832
25	7.2	4.5	0.0	chr2	70766944	70766987	(171426542)	+	(TTTTCTA)n	Simple_repeat	1	46	(0)	2019579
12	11.6	3.3	3.2	chr2	70767200	70767229	(171426300)	+	G-rich	Low_complexity	1	31	(0)	2019580
25034	6.2	1.1	0.3	chr2	70842199	70848320	(171345209)	+	L1PA6	LINE/L1	1	6150	(4)	2019700
17	8.7	11.8	1.8	chr2	70887854	70887904	(171305625)	+	(CTCCCGCG)n	Simple_repeat	1	57	(0)	2019774
13	8.5	4.0	0.0	chr2	70887938	70887962	(171305567)	+	(CCTTT)n	Simple_repeat	1	26	(0)	2019775
18	25.4	1.8	0.0	chr2	73269059	73269125	(168924404)	+	G-rich	Low_complexity	1	68	(0)	2023421
30	19.8	1.9	6.5	chr2	73284383	73284487	(168909042)	+	GA-rich	Low_complexity	1	107	(0)	2023446
15	23.1	0.0	4.0	chr2	73284634	73284683	(168908846)	+	(GGCTCCC)n	Simple_repeat	1	50	(0)	2023447
13	29.1	3.1	1.5	chr2	74553991	74554054	(167639475)	+	(TCTCCCT)n	Simple_repeat	1	66	(0)	2025553
16	14.5	5.3	0.0	chr2	74554224	74554261	(167639268)	+	(GCG)n	Simple_repeat	1	40	(0)	2025554
670	23.0	11.1	3.7	chr2	74837066	74837282	(167356247)	C	MIR	SINE/MIR	(20)	242	8	2026061
13364	14.1	2.2	5.0	chr2	74947466	74950704	(167242825)	+	L1PA15	LINE/L1	14	3153	(3178)	2026235
14	8.4	0.0	3.7	chr2	74958682	74958708	(167234821)	+	(GGC)n	Simple_repeat	1	27	(0)	2026250
23401	8.3	0.5	0.2	chr2	75368897	75375035	(166818494)	C	L1PA6	LINE/L1	(7)	6147	5	2026870
27329	3.0	0.2	0.1	chr2	77592832	77598845	(164594684)	+	L1PA3	LINE/L1	135	6155	(0)	2029867
27312	3.0	0.2	0.1	chr2	77753773	77759778	(164433751)	+	L1PA2	LINE/L1	145	6155	(0)	2030066
31	0.0	0.0	0.0	chr2	80304611	80304639	(161888890)	+	(GCGGGCG)n	Simple_repeat	1	29	(0)	2033553
187	14.3	0.0	0.0	chr2	84959730	84959757	(157233772)	+	MIR3	SINE/MIR	33	60	(148)	2039777
202	28.4	9.9	7.2	chr2	84959768	84959934	(157233595)	C	L2c	LINE/L2	(2)	3385	3214	2039778
255	31.7	1.0	2.9	chr2	84959944	84960047	(157233482)	C	MER5B	DNA/hAT-Charlie	(2)	176	75	2039779
1086	14.3	1.8	3.0	chr2	84960189	84960356	(157233173)	C	AluJb	SINE/Alu	(10)	302	137	2039780
23	18.5	0.0	0.0	chr2	85133230	85133277	(157060252)	+	(GT)n	Simple_repeat	1	48	(0)	2040181
18	11.6	0.0	4.9	chr2	85616281	85616321	(156577208)	+	G-rich	Low_complexity	1	41	(0)	2041141
15	23.7	0.0	7.3	chr2	86807811	86807878	(155385651)	+	G-rich	Low_complexity	1	68	(0)	2043240
284	26.3	8.3	2.2	chr2	86808329	86808464	(155385065)	C	MIR3	SINE/MIR	(8)	200	56	2043241
392	30.8	10.6	1.0	chr2	96321083	96321284	(145872245)	C	MIRb	SINE/MIR	(32)	230	8	2051941
15	8.2	4.3	4.3	chr2	96335904	96335939	(145857590)	+	G-rich	Low_complexity	1	36	(0)	2051964
14	20.0	2.4	2.3	chr2	96335988	96336029	(145857500)	+	G-rich	Low_complexity	1	43	(0)	2051964
218	19.2	0.0	0.0	chr2	96538938	96538989	(145654540)	+	MIR3	SINE/MIR	76	127	(141)	2052315
13	19.6	7.4	1.7	chr2	102619492	102619545	(139573984)	+	(GCGCC)n	Simple_repeat	1	58	(0)	2061316
1053	25.0	4.2	0.9	chr2	104286959	104287277	(137906252)	C	LTR33	LTR/ERVL	(173)	342	13	2063325
18	9.6	6.2	3.9	chr2	109614268	109614315	(132579214)	+	G-rich	Low_complexity	1	51	(0)	2070958
28	23.9	3.3	1.1	chr2	110732466	110732555	(131460974)	+	G-rich	Low_complexity	1	93	(0)	2072634
265	34.4	0.0	0.0	chr2	110772248	110772343	(131421186)	+	MER5B	DNA/hAT-Charlie	3	98	(80)	2072693
234	31.5	2.2	1.1	chr2	110873453	110873542	(131319987)	C	MIR	SINE/MIR	(34)	228	138	2072826
13	21.3	4.5	0.0	chr2	111118219	111118262	(131075267)	+	A-rich	Low_complexity	1	46	(0)	2073125
12	4.5	4.0	3.9	chr2	111120579	111120603	(131072926)	+	(GCC)n	Simple_repeat	1	26	(0)	2073127
180	28.5	8.9	3.1	chr2	112181575	112181701	(130011828)	+	L2b	LINE/L2	3213	3347	(28)	2074679
616	31.3	7.0	4.0	chr2	112480821	112481196	(129712333)	C	LTR16C	LTR/ERVL	(1)	488	101	2075171
29408	0.5	0.1	0.1	chr2	112503813	112509845	(129683684)	C	L1HS	LINE/L1	(0)	6155	125	2075214
14851	10.5	3.7	3.9	chr2	112612995	112615352	(129578177)	C	L1PA7	LINE/L1	(4021)	2478	10	2075417
20571	13.6	2.8	2.6	chr2	113148369	113150591	(129042938)	C	L1MA2	LINE/L1	(5206)	2359	133	2076314
2307	7.4	3.9	0.0	chr2	113150592	113150887	(129042642)	C	AluSp	SINE/Alu	(5)	308	1	2076318
14	8.4	0.0	3.7	chr2	113756357	113756383	(128437146)	+	(CCTG)n	Simple_repeat	1	27	(0)	2077266
11	16.4	5.9	0.0	chr2	113756428	113756461	(128437068)	+	(CCGCGG)n	Simple_repeat	1	36	(0)	2077267
16	19.5	3.6	3.5	chr2	113756650	113756705	(128436824)	+	(CCCCGC)n	Simple_repeat	1	58	(0)	2077268
13	21.9	1.8	7.0	chr2	113756846	113756901	(128436628)	+	GA-rich	Low_complexity	1	57	(0)	2077269
14	10.1	6.2	0.0	chr2	113889918	113889949	(128303580)	+	G-rich	Low_complexity	1	34	(0)	2077575
17	11.7	0.0	8.9	chr2	113890006	113890050	(128303479)	+	GA-rich	Low_complexity	1	45	(0)	2077576
12	11.9	0.0	6.5	chr2	113890041	113890071	(128303458)	+	G-rich	Low_complexity	1	31	(0)	2077577
374	30.0	3.9	0.0	chr2	119234689	119234788	(122958741)	+	MER91C	DNA/hAT-Tip100	3	106	(34)	2084959
254	31.1	10.0	5.1	chr2	119366266	119366482	(122827047)	C	L2c	LINE/L2	(3)	3384	3156	2085210
444	26.1	5.5	1.2	chr2	120373835	120373998	(121819531)	C	MIR	SINE/MIR	(20)	242	70	2086852
457	30.1	0.7	0.0	chr2	120466633	120466768	(121726761)	+	MIRb	SINE/MIR	48	184	(84)	2087011
25	3.5	0.0	0.0	chr2	121649464	121649493	(120544036)	+	(A)n	Simple_repeat	1	30	(0)	2089035
260	32.7	4.0	12.1	chr2	122734544	122735043	(119458486)	C	L2a	LINE/L2	(1)	3425	2918	2090837
24	15.3	2.3	0.0	chr2	122735099	122735142	(119458387)	+	(CT)n	Simple_repeat	1	45	(0)	2090838
39	0.0	0.0	0.0	chr2	127105468	127105503	(115088026)	+	(CCT)n	Simple_repeat	1	36	(0)	2096881
22351	13.7	1.5	1.0	chr2	127208082	127211361	(114982168)	+	L1PA8A	LINE/L1	2	3306	(3155)	2097060
14	22.8	0.0	0.0	chr2	127526413	127526448	(114667081)	+	(GGCG)n	Simple_repeat	1	36	(0)	2097594
14	12.2	5.3	2.5	chr2	128091278	128091315	(114102214)	+	(CCTGC)n	Simple_repeat	1	40	(0)	2098653
73	28.3	2.2	2.9	chr2	128644673	128644943	(113548586)	+	(CTCC)n	Simple_repeat	1	277	(0)	2099521
2804	12.3	9.1	0.0	chr2	128645278	128645706	(113547823)	+	MER4A1	LTR/ERV1	1	472	(0)	2099522
78	21.8	2.5	1.5	chr2	128664319	128664517	(113529012)	+	(CCTCT)n	Simple_repeat	1	204	(0)	2099546
11	21.6	0.0	4.9	chr2	132489403	132489443	(109704086)	+	G-rich	Low_complexity	1	41	(0)	2104663
7691	16.9	15.5	2.5	chr2	134075289	134076808	(108116721)	C	MER52A	LTR/ERV1	(2)	1753	1	2106891
12	4.9	0.0	4.3	chr2	134706035	134706057	(107487472)	+	(AGGC)n	Simple_repeat	1	23	(0)	2107790
15	18.3	0.0	2.6	chr2	135531567	135531621	(106661908)	+	(CCCGC)n	Simple_repeat	1	53	(0)	2109150
17	15.5	4.7	0.0	chr2	135531859	135531901	(106661628)	+	(GGCTGC)n	Simple_repeat	1	45	(0)	2109151
13	11.1	3.2	3.1	chr2	135876443	135876473	(106317056)	+	(CGC)n	Simple_repeat	1	32	(0)	2109773
13	14.8	8.5	2.0	chr2	135985449	135985495	(106208034)	+	(CTGGACA)n	Simple_repeat	1	51	(0)	2109962
516	26.5	10.0	4.4	chr2	136527869	136528093	(105665436)	+	MIR	SINE/MIR	14	252	(10)	2110842
647	31.0	6.0	0.3	chr2	136582335	136582661	(105610868)	+	L4_A_Mam	LINE/RTE-X	4483	4829	(161)	2110936
256	24.0	3.9	1.3	chr2	136582751	136582826	(105610703)	+	LTR16E1	LTR/ERVL	4	81	(457)	2110937
250	31.6	3.1	0.0	chr2	136582913	136583007	(105610522)	+	LTR16E1	LTR/ERVL	156	253	(236)	2110937
27233	3.1	0.3	0.0	chr2	142806276	142812293	(99381236)	C	L1PA3	LINE/L1	(0)	6155	124	2119273
22631	3.1	0.2	0.1	chr2	146405742	146411341	(95782188)	+	L1PA2	LINE/L1	127	6155	(0)	2123879
20	17.8	5.2	4.9	chr2	147844275	147844351	(94349178)	+	(CTCCG)n	Simple_repeat	1	81	(0)	2125790
12	4.5	4.0	3.9	chr2	148020984	148021008	(94172521)	+	(TCC)n	Simple_repeat	1	26	(0)	2126016
11793	9.6	2.3	3.5	chr2	148361719	148363237	(93830292)	+	L1PA7	LINE/L1	1	1558	(4903)	2126542
462	28.9	15.0	6.0	chr2	148613825	148613978	(93579551)	+	MLT1M	LTR/ERVL-MaLR	106	283	(389)	2126876
2058	17.6	7.9	2.2	chr2	148613979	148614385	(93579144)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	2126878
25103	4.0	0.1	0.5	chr2	149501243	149507406	(92686123)	C	L1PA4	LINE/L1	(16)	6139	1	2128155
36	22.2	1.2	0.0	chr2	152098738	152098822	(90094707)	+	GA-rich	Low_complexity	1	86	(0)	2131855
26	17.8	0.0	3.3	chr2	152098885	152098945	(90094584)	+	GA-rich	Low_complexity	1	61	(0)	2131855
27546	2.8	0.0	0.0	chr2	153397922	153403952	(88789577)	C	L1PA2	LINE/L1	(0)	6155	127	2133691
12	22.8	1.7	6.8	chr2	153478574	153478631	(88714898)	+	G-rich	Low_complexity	1	59	(0)	2133770
14	16.9	3.0	0.0	chr2	153478867	153478899	(88714630)	+	(GGC)n	Simple_repeat	1	34	(0)	2133771
28710	0.7	0.1	0.1	chr2	157566354	157572377	(84621152)	+	L1HS	LINE/L1	130	6153	(2)	2138905
21	16.8	1.4	7.1	chr2	159798202	159798270	(82395259)	+	G-rich	Low_complexity	1	70	(0)	2142174
11	24.0	2.6	0.0	chr2	160493873	160493911	(81699618)	+	(GGCCGG)n	Simple_repeat	1	40	(0)	2143162
17	20.6	4.0	0.0	chr2	160494008	160494057	(81699472)	+	G-rich	Low_complexity	1	52	(0)	2143163
27	19.3	5.8	2.2	chr2	161238802	161238888	(80954641)	+	(CCCT)n	Simple_repeat	1	92	(0)	2144146
14	15.2	5.2	6.6	chr2	162074155	162074212	(80119317)	+	(GCGGC)n	Simple_repeat	1	61	(0)	2145198
285	29.5	4.0	2.7	chr2	162074388	162074537	(80118992)	C	MIR3	SINE/MIR	(25)	183	32	2145199
13	20.1	0.0	2.8	chr2	163736893	163736928	(78456601)	+	(CCCT)n	Simple_repeat	1	36	(0)	2147387
12776	17.7	3.7	1.0	chr2	166627024	166629348	(75564181)	C	L1PREC2	LINE/L1	(4307)	3848	1459	2151247
22061	10.5	3.0	1.1	chr2	167844236	167849605	(74343924)	+	L1PB1	LINE/L1	6	5731	(1131)	2152700
14	13.1	9.5	0.0	chr2	168456095	168456136	(73737393)	+	(TGCGCCC)n	Simple_repeat	1	46	(0)	2153583
28	14.8	0.0	1.9	chr2	168456296	168456349	(73737180)	+	(GCG)n	Simple_repeat	1	54	(0)	2153584
2280	26.0	12.0	2.5	chr2	168552746	168553962	(73639567)	+	L1M7	LINE/L1	606	2280	(185)	2153734
13	13.1	13.3	1.5	chr2	169824904	169824963	(72368566)	+	(GCGCGCAC)n	Simple_repeat	1	68	(0)	2155676
13	18.6	3.7	5.4	chr2	170715346	170715399	(71478130)	+	G-rich	Low_complexity	1	56	(0)	2157104
187	28.6	0.0	0.0	chr2	171319195	171319250	(70874279)	C	MIRc	SINE/MIR	(2)	266	211	2158258
25073	6.6	0.5	0.4	chr2	172264706	172270864	(69922665)	C	L1PA6	LINE/L1	(1)	6153	6	2159896
14	20.2	4.3	2.0	chr2	173354872	173354918	(68838611)	+	(GCT)n	Simple_repeat	1	49	(0)	2161545
26401	2.5	0.1	0.0	chr2	173527290	173533317	(68660212)	C	L1PA3	LINE/L1	(0)	6155	127	2161822
5170	15.0	1.5	1.3	chr2	173533325	173534369	(68659160)	C	L1M2	LINE/L1	(2068)	4075	3029	2161821
18	31.8	0.0	0.0	chr2	174336898	174336959	(67856570)	+	(CGC)n	Simple_repeat	1	62	(0)	2163103
18	16.9	0.0	5.8	chr2	177212582	177212633	(64980896)	+	(CGCCCGC)n	Simple_repeat	1	52	(0)	2167291
15	15.1	2.6	2.5	chr2	177213180	177213218	(64980311)	+	G-rich	Low_complexity	1	40	(0)	2167293
2134	26.8	13.3	1.9	chr2	177731249	177732024	(64461505)	C	HAL1	LINE/L1	(1628)	879	2	2168012
16128	17.8	5.9	4.6	chr2	180032933	180035021	(62158508)	C	L1MA2	LINE/L1	(2452)	2146	9	2170972
25041	7.0	0.9	0.2	chr2	180585620	180591717	(61601812)	C	L1PA5	LINE/L1	(0)	6154	11	2171646
22613	11.6	1.6	1.8	chr2	181410807	181417280	(60776249)	+	L1PA8A	LINE/L1	1	6446	(0)	2172709
24264	7.1	0.4	0.1	chr2	181798562	181804707	(60388822)	C	L1PA6	LINE/L1	(3)	6151	1	2173141
21	8.9	0.0	2.6	chr2	181892203	181892211	(60301318)	+	(CGAGGA)n	Simple_repeat	1	37	(0)	2173264
18	7.6	0.0	0.0	chr2	181892212	181892239	(60301290)	+	(AGG)n	Simple_repeat	1	28	(0)	2173265
12	19.7	4.7	2.2	chr2	183037942	183037984	(59155545)	+	(CCCGC)n	Simple_repeat	1	45	(0)	2174822
11288	13.2	2.2	3.8	chr2	183416375	183418861	(58774668)	+	L1PA8	LINE/L1	58	2539	(3944)	2175392
7527	10.0	0.1	0.0	chr2	185289850	185290860	(56902669)	+	L1P2	LINE/L1	5	1016	(5168)	2177604
18	20.2	3.9	0.0	chr2	186693990	186694040	(55499489)	+	(CTCCTC)n	Simple_repeat	1	53	(0)	2179447
13	18.3	2.6	2.5	chr2	186694092	186694138	(55499391)	+	(CGCCGCC)n	Simple_repeat	1	47	(0)	2179448
12338	12.1	1.4	3.5	chr2	187517161	187520609	(54672920)	C	L1P3	LINE/L1	(3011)	3450	1	2180481
3909	14.3	5.5	7.8	chr2	188032255	188032307	(54161222)	+	THE1C-int	LTR/ERVL-MaLR	30	82	(1498)	2181143
2131	12.4	9.2	11.9	chr2	188032308	188032803	(54160726)	+	LTR21A	LTR/ERV1	1	481	(0)	2181144
210	32.5	2.4	1.2	chr2	189762931	189763011	(52430518)	C	MIRb	SINE/MIR	(151)	117	36	2183331
14	14.2	3.2	0.0	chr2	190343878	190343908	(51849621)	+	(CCT)n	Simple_repeat	1	32	(0)	2184207
28	3.3	0.0	0.0	chr2	190534906	190534936	(51658593)	+	(CGGCCT)n	Simple_repeat	1	31	(0)	2184502
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
12396	6.0	0.2	1.3	chr2	193903875	193905536	(48287993)	+	L1P1	LINE/L1	1	1644	(4511)	2189013
20032	6.8	1.2	0.1	chr2	195265115	195269845	(46923684)	C	L1PA6	LINE/L1	(1385)	4761	1	2190668
26550	1.9	0.2	0.0	chr2	196521489	196527500	(45666029)	C	L1PA2	LINE/L1	(7)	6148	128	2192527
27536	2.8	0.4	0.0	chr2	197728963	197734964	(44458565)	+	L1PA4	LINE/L1	298	6325	(3)	2194530
13	7.6	0.0	8.8	chr2	199457449	199457482	(42736047)	+	(CTTCCC)n	Simple_repeat	1	34	(0)	2196844
17	7.1	3.1	3.0	chr2	199457555	199457586	(42735943)	+	(GGA)n	Simple_repeat	1	33	(0)	2196845
14	11.8	7.7	2.4	chr2	199457621	199457659	(42735870)	+	GA-rich	Low_complexity	1	42	(0)	2196846
17	13.3	0.0	2.9	chr2	199457723	199457757	(42735772)	+	(CGG)n	Simple_repeat	1	35	(0)	2196847
17	17.8	4.4	0.0	chr2	199459312	199459358	(42734171)	+	(GCCGCCG)n	Simple_repeat	1	49	(0)	2196851
13	20.8	0.0	0.0	chr2	203328209	203328241	(38865288)	+	G-rich	Low_complexity	1	33	(0)	2203790
852	13.3	0.7	0.0	chr2	205466035	205466177	(36727352)	C	MER5A1	DNA/hAT-Charlie	(22)	144	1	2206993
12	19.3	4.7	2.2	chr2	205686012	205686054	(36507475)	+	(CCCCT)n	Simple_repeat	1	45	(0)	2207286
378	34.8	2.9	1.2	chr2	208265687	208265903	(33927626)	C	MIR	SINE/MIR	(23)	239	26	2211619
27518	2.8	0.1	0.0	chr2	208811622	208817648	(33375881)	+	L1PA2	LINE/L1	124	6155	(0)	2212312
4333	19.1	9.8	2.9	chr2	209306971	209307949	(32885580)	C	MER52A	LTR/ERV1	(476)	1279	204	2212847
937	14.7	14.9	0.7	chr2	209307973	209308193	(32885336)	C	MSTA	LTR/ERVL-MaLR	(122)	259	1	2212846
14	13.2	2.9	2.8	chr2	209771905	209771939	(32421590)	+	G-rich	Low_complexity	1	36	(0)	2213450
22597	9.1	1.1	0.5	chr2	210181084	210184989	(32008540)	+	L1PA7	LINE/L1	72	3989	(2472)	2214053
16	24.7	7.2	1.4	chr2	216109701	216109769	(26083760)	+	(TC)n	Simple_repeat	1	74	(0)	2222200
17	14.2	0.0	0.0	chr2	216372298	216372328	(25821201)	+	(CCG)n	Simple_repeat	1	31	(0)	2222623
15	13.9	0.0	0.0	chr2	216694860	216694883	(25498646)	+	(T)n	Simple_repeat	1	24	(0)	2223259
15	27.3	0.0	0.0	chr2	216766035	216766079	(25427450)	+	A-rich	Low_complexity	1	45	(0)	2223387
2057	25.2	11.7	6.5	chr2	217509332	217511072	(24682457)	C	L1MC4	LINE/L1	(3827)	2388	529	2224506
14	7.2	0.0	8.6	chr2	218406515	218406549	(23786980)	+	(GCCCC)n	Simple_repeat	1	35	(0)	2226047
18	12.1	2.8	0.0	chr2	218568343	218568378	(23625151)	+	(CACG)n	Simple_repeat	1	37	(0)	2226392
15	7.5	0.0	6.2	chr2	218568413	218568444	(23625085)	+	(CCGCC)n	Simple_repeat	1	32	(0)	2226393
11	18.1	2.4	4.8	chr2	218999873	218999913	(23193616)	+	(TCTCTT)n	Simple_repeat	1	42	(0)	2227179
231	35.1	8.7	2.9	chr2	219003334	219003506	(23190023)	C	MIRb	SINE/MIR	(31)	237	54	2227184
13	22.1	0.0	4.3	chr2	219046174	219046219	(23147310)	+	(CCTTCCT)n	Simple_repeat	1	46	(0)	2227255
472	34.1	5.0	2.0	chr2	219046277	219046530	(23146999)	+	MIR	SINE/MIR	1	262	(0)	2227256
14	8.9	7.9	2.4	chr2	219460655	219460692	(22732837)	+	(CTCCCC)n	Simple_repeat	1	41	(0)	2227982
221	30.2	8.5	5.6	chr2	219569975	219570100	(22623429)	+	MER5A	DNA/hAT-Charlie	14	143	(46)	2228140
56	12.4	0.0	0.0	chr2	219571954	219572050	(22621479)	+	(TG)n	Simple_repeat	1	97	(0)	2228145
17272	7.4	0.7	1.2	chr2	222366279	222368886	(19824643)	C	L1P2	LINE/L1	(3553)	2593	5	2232483
12	6.8	9.1	2.8	chr2	222671590	222671622	(19521907)	+	(CCCAG)n	Simple_repeat	1	36	(0)	2232961
12	15.5	3.5	0.0	chr2	222860880	222860908	(19332621)	+	(CGCGC)n	Simple_repeat	1	30	(0)	2233362
396	25.6	7.3	8.9	chr2	223101640	223101806	(19091723)	C	MLT1K	LTR/ERVL-MaLR	(272)	323	163	2233733
221	22.2	2.2	0.0	chr2	223101926	223101970	(19091559)	C	MIRb	SINE/MIR	(180)	88	43	2233732
273	28.1	8.6	7.1	chr2	224433640	224433823	(17759706)	+	L2c	LINE/L2	2977	3163	(224)	2235924
285	29.4	3.4	1.2	chr2	224433901	224433986	(17759543)	+	L2c	LINE/L2	3300	3387	(0)	2235924
16511	9.8	2.7	2.1	chr2	224484837	224489748	(17703781)	+	L1P3	LINE/L1	6	4981	(1480)	2236018
11	6.7	5.4	7.7	chr2	226031344	226031380	(16162149)	+	(CCCCCTT)n	Simple_repeat	1	39	(0)	2238334
14	22.5	7.0	0.0	chr2	226031454	226031510	(16162019)	+	(GGCTGC)n	Simple_repeat	1	61	(0)	2238335
26332	2.8	0.4	0.1	chr2	227064886	227070875	(15122654)	+	L1PA3	LINE/L1	136	6142	(13)	2239862
427	33.1	7.5	0.0	chr2	227660920	227661103	(14532426)	C	LTR33B	LTR/ERVL	(294)	209	11	2240866
569	27.8	5.3	5.7	chr2	227661117	227661345	(14532184)	C	LTR107_Mam	LTR	(239)	331	104	2240867
208	26.2	1.6	0.0	chr2	231052833	231052893	(11140636)	C	MIRb	SINE/MIR	(186)	82	21	2246150
13	11.0	9.8	2.2	chr2	231662447	231662487	(10531042)	+	(CCGCT)n	Simple_repeat	1	45	(0)	2247398
14	16.9	0.0	2.9	chr2	231666540	231666574	(10526955)	+	G-rich	Low_complexity	1	35	(0)	2247403
12	18.3	5.4	0.0	chr2	231708162	231708198	(10485331)	+	G-rich	Low_complexity	1	39	(0)	2247478
22	17.3	0.0	2.1	chr2	231708583	231708630	(10484899)	+	(CGC)n	Simple_repeat	1	48	(0)	2247479
6887	6.5	0.2	0.2	chr2	232366156	232367134	(9826395)	+	LTR12C	LTR/ERV1	2	980	(599)	2248539
11	25.5	2.2	2.2	chr2	232387915	232387959	(9805570)	+	G-rich	Low_complexity	1	46	(0)	2248578
13	27.2	3.1	3.0	chr2	232633534	232633598	(9559931)	+	(CCGC)n	Simple_repeat	1	67	(0)	2249014
21	12.8	6.2	4.3	chr2	232633636	232633700	(9559829)	+	(CGCGTCC)n	Simple_repeat	1	69	(0)	2249015
21	18.8	3.3	7.5	chr2	232633795	232633885	(9559644)	+	(GCCCGA)n	Simple_repeat	1	94	(0)	2249016
318	28.5	12.3	4.4	chr2	232890858	232891264	(9302265)	+	L2c	LINE/L2	2934	3366	(9)	2249503
348	31.3	16.4	3.8	chr2	232966294	232966632	(9226897)	C	LTR78	LTR/ERV1	(714)	590	201	2249628
18	0.0	0.0	0.0	chr2	233051605	233051627	(9141902)	+	(TTTG)n	Simple_repeat	1	23	(0)	2249805
585	25.9	7.1	8.0	chr2	233140841	233141251	(9052278)	+	L1ME3Cz	LINE/L1	19	425	(572)	2249973
26512	2.6	0.1	0.1	chr2	233577840	233583870	(8609659)	C	L1PA3	LINE/L1	(0)	6155	124	2250694
289	29.3	9.7	2.1	chr2	233868462	233868747	(8324782)	C	L1M5	LINE/L1	(2848)	3298	2989	2251040
17	11.4	2.4	4.7	chr2	236086845	236086886	(6106643)	+	(CCTC)n	Simple_repeat	1	43	(0)	2254489
11	20.6	5.1	0.0	chr2	238096819	238096857	(4096672)	+	(AGTGCCG)n	Simple_repeat	1	41	(0)	2257364
264	26.0	5.7	0.0	chr2	238109214	238109313	(4084216)	C	Charlie15a	DNA/hAT-Charlie	(0)	224	119	2257375
19	6.6	3.1	0.0	chr2	238231775	238231806	(3961723)	+	(AAAC)n	Simple_repeat	1	33	(0)	2257541
230	34.6	6.5	4.4	chr2	238319954	238320089	(3873440)	C	MIRc	SINE/MIR	(68)	200	62	2257649
14	20.4	0.0	2.4	chr2	238320298	238320338	(3873191)	+	(CCCGCTC)n	Simple_repeat	1	41	(0)	2257650
204	20.2	13.3	0.9	chr2	241009697	241009812	(1183717)	+	L2c	LINE/L2	3119	3250	(125)	2260576
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
29	29.1	1.3	5.2	chr2	241218397	241218547	(974982)	+	(GGCGG)n	Simple_repeat	1	153	(0)	2260835
333	33.8	2.9	0.0	chr2	241509180	241509312	(684217)	+	MIR	SINE/MIR	89	225	(37)	2261237
15	3.8	0.0	9.1	chr2	241558857	241558889	(634640)	+	(GGGCG)n	Simple_repeat	1	33	(0)	2261347
2037	6.9	6.7	4.9	chr2	241700957	241701262	(492267)	C	AluSz	SINE/Alu	(0)	312	1	2261582
55	0.0	0.0	0.0	chr2	241881595	241881641	(311888)	+	(GT)n	Simple_repeat	1	47	(0)	2261811
13	23.8	1.9	3.7	chr20	310383	310435	(64133732)	+	(CCCAGCC)n	Simple_repeat	1	54	(0)	2262619
13	24.2	1.9	3.8	chr20	324509	324560	(64119607)	+	(CGCCC)n	Simple_repeat	1	53	(0)	2262662
239	24.2	2.9	0.0	chr20	574876	574941	(63869226)	+	L3	LINE/CR1	3927	3994	(105)	2263223
182	17.0	2.1	2.1	chr20	2006063	2006110	(62438057)	C	L2b	LINE/L2	(0)	3375	3328	2266090
24231	6.6	0.6	0.5	chr20	2264448	2270606	(62173561)	+	L1PA6	LINE/L1	5	6149	(5)	2266615
206	15.2	0.0	0.0	chr20	2873164	2873196	(61570971)	+	MIRc	SINE/MIR	121	153	(115)	2267730
14	8.1	0.0	3.6	chr20	3168339	3168366	(61275801)	+	(GGAGG)n	Simple_repeat	1	28	(0)	2268341
223	32.9	4.5	4.4	chr20	3767245	3767403	(60676764)	C	MIRc	SINE/MIR	(104)	164	11	2269451
15	11.9	5.9	5.6	chr20	3767586	3767636	(60676531)	+	(GGACCG)n	Simple_repeat	1	54	(0)	2269452
2197	8.9	1.6	2.0	chr20	3926658	3926961	(60517206)	+	AluSx	SINE/Alu	1	303	(9)	2269796
16	8.1	10.3	0.0	chr20	4221630	4221668	(60222499)	+	(CTGCGCG)n	Simple_repeat	1	43	(0)	2270389
18	13.7	2.4	2.3	chr20	4823488	4823529	(59620638)	+	(CCCT)n	Simple_repeat	1	43	(0)	2271388
12	22.8	4.8	0.0	chr20	4823639	4823680	(59620487)	+	(CCTCC)n	Simple_repeat	1	44	(0)	2271389
521	13.4	2.4	0.0	chr20	5119169	5119250	(59324917)	+	FLAM_A	SINE/Alu	44	127	(15)	2272054
13	24.0	0.0	0.0	chr20	6006258	6006296	(58437871)	+	(GCGCGCG)n	Simple_repeat	1	39	(0)	2273691
26276	2.5	0.2	0.1	chr20	6315822	6321844	(58122323)	C	L1PA2	LINE/L1	(0)	6155	126	2274226
15	11.6	0.0	3.3	chr20	9067826	9067855	(55376312)	+	(GGA)n	Simple_repeat	1	30	(0)	2278344
314	29.1	9.3	0.8	chr20	9068085	9068212	(55375955)	+	MIR	SINE/MIR	102	241	(21)	2278345
13	26.5	1.6	4.6	chr20	10219528	10219591	(54224576)	+	G-rich	Low_complexity	1	65	(0)	2280188
18	19.5	2.7	6.7	chr20	10219592	10219597	(54224570)	+	(GCGG)n	Simple_repeat	4	75	(0)	2280189
1576	23.3	5.7	10.1	chr20	10351045	10351578	(54092589)	C	MER21C	LTR/ERVL	(306)	632	124	2280392
12998	13.7	1.5	1.5	chr20	11379234	11383682	(53060485)	+	L1PA10	LINE/L1	1	4453	(2008)	2281911
1471	19.0	4.3	2.2	chr20	17530408	17530724	(46913443)	+	L1ME2	LINE/L1	5841	6164	(0)	2291043
27	23.3	6.8	2.8	chr20	17569455	17569586	(46874581)	+	(CCCTCA)n	Simple_repeat	1	141	(0)	2291130
13	11.2	14.6	0.0	chr20	18138192	18138239	(46305928)	+	(TGCGGC)n	Simple_repeat	1	55	(0)	2292194
16	18.9	0.0	0.0	chr20	20366682	20366711	(44077456)	+	G-rich	Low_complexity	1	30	(0)	2295537
18	9.7	3.0	0.0	chr20	21396154	21396186	(43047981)	+	(GCG)n	Simple_repeat	1	34	(0)	2297033
25595	4.7	0.1	0.1	chr20	22040465	22046614	(42397553)	C	L1PA3	LINE/L1	(3)	6152	1	2297914
27522	4.5	0.1	0.2	chr20	23896852	23903006	(40541161)	C	L1PA3	LINE/L1	(4)	6151	2	2300244
12	19.1	2.6	2.6	chr20	25058488	25058525	(39385642)	+	(GGCCCAG)n	Simple_repeat	1	39	(0)	2301647
378	23.6	5.4	2.7	chr20	25149032	25149195	(39294972)	+	MIRb	SINE/MIR	1	175	(93)	2301771
15	29.0	0.0	0.0	chr20	25390896	25390945	(39053222)	+	(CCCCCG)n	Simple_repeat	1	50	(0)	2302098
14	13.4	6.1	0.0	chr20	31573028	31573060	(32871107)	+	GA-rich	Low_complexity	1	35	(0)	2306294
395	29.8	2.7	2.2	chr20	32359380	32359561	(32084606)	C	MER5A	DNA/hAT-Charlie	(0)	189	7	2308301
46	27.1	2.6	6.6	chr20	32483590	32483856	(31960311)	+	GA-rich	Low_complexity	1	274	(0)	2308513
15	4.0	3.6	3.5	chr20	32681266	32681293	(31762874)	+	(GCAG)n	Simple_repeat	1	29	(0)	2308999
1025	16.7	6.2	0.0	chr20	32750287	32750484	(31693683)	C	L1MD1	LINE/L1	(0)	6242	6032	2309195
571	28.5	2.3	3.6	chr20	32752114	32752311	(31691856)	C	L2b	LINE/L2	(1)	3425	3223	2309200
318	30.8	7.0	0.0	chr20	32780923	32781042	(31663125)	+	MER3	DNA/hAT-Charlie	3	131	(78)	2309277
465	21.2	14.3	0.0	chr20	32820408	32820551	(31623616)	+	MIRb	SINE/MIR	4	167	(101)	2309346
14	14.8	0.0	3.0	chr20	34983915	34983947	(29460220)	+	GA-rich	Low_complexity	1	33	(0)	2314291
12	17.5	3.1	0.0	chr20	34983948	34983979	(29460188)	+	(TGAGGA)n	Simple_repeat	1	33	(0)	2314292
369	23.7	3.3	3.9	chr20	34984035	34984171	(29459996)	+	MIRb	SINE/MIR	38	183	(85)	2314293
875	25.2	6.1	4.0	chr20	35227353	35227625	(29216542)	+	L3	LINE/CR1	3712	3990	(109)	2314818
16	17.1	6.5	0.0	chr20	35227638	35227683	(29216484)	+	(TGCA)n	Simple_repeat	1	49	(0)	2314819
13	12.1	5.0	4.8	chr20	35601756	35601795	(28842372)	+	G-rich	Low_complexity	1	42	(0)	2315649
216	33.7	16.4	1.9	chr20	35771389	35771706	(28672461)	C	L2	LINE/L2	(358)	3061	2689	2316008
17	15.8	2.3	2.2	chr20	36051058	36051101	(28393066)	+	(GGAGTGG)n	Simple_repeat	1	45	(0)	2316726
451	25.4	9.1	1.7	chr20	36344444	36344628	(28099539)	C	MIR	SINE/MIR	(54)	214	23	2317389
15	6.7	2.9	5.6	chr20	36344725	36344759	(28099408)	+	G-rich	Low_complexity	1	36	(0)	2317390
17	26.8	1.4	4.1	chr20	36461263	36461334	(27982833)	+	(GGCC)n	Simple_repeat	1	73	(0)	2317683
197	34.4	0.0	0.0	chr20	36585826	36585889	(27858278)	C	L2b	LINE/L2	(16)	3359	3296	2317951
195	29.3	8.3	6.2	chr20	36865564	36865774	(27578393)	C	L2b	LINE/L2	(18)	3357	3142	2318644
37	27.5	1.5	2.9	chr20	37396410	37396543	(27047624)	+	(TCCTCCC)n	Simple_repeat	1	136	(0)	2319939
224	20.8	4.0	0.0	chr20	37627081	37627128	(26817039)	+	MIR3	SINE/MIR	152	201	(7)	2320432
12	18.7	5.8	3.6	chr20	38674526	38674577	(25769590)	+	(CCCCACA)n	Simple_repeat	1	55	(0)	2322625
366	36.0	0.7	0.0	chr20	38685705	38685857	(25758310)	C	UCON2	DNA?	(8)	577	424	2322651
20	20.2	8.6	3.0	chr20	38692446	38692538	(25751629)	+	(TTCC)n	Simple_repeat	1	101	(0)	2322668
582	27.4	12.8	0.5	chr20	38962792	38962989	(25481178)	+	MIR	SINE/MIR	23	248	(14)	2323235
31	38.3	0.6	2.9	chr20	40274953	40275124	(24169043)	+	(TG)n	Simple_repeat	1	173	(0)	2325481
304	31.7	8.0	10.3	chr20	41340247	41340489	(23103678)	C	L2b	LINE/L2	(18)	3357	3121	2327403
14	25.6	3.1	3.0	chr20	44247221	44247289	(20196878)	+	(GGCGA)n	Simple_repeat	1	69	(0)	2333007
737	24.7	4.8	4.4	chr20	44776742	44776970	(19667197)	C	MIR	SINE/MIR	(15)	247	18	2334314
12	29.8	3.2	1.5	chr20	45342653	45342715	(19101452)	+	G-rich	Low_complexity	1	65	(0)	2335437
12	22.0	2.7	0.0	chr20	45934710	45934746	(18509421)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	2336591
13	32.3	1.6	0.0	chr20	45935022	45935085	(18509082)	+	(CCTCCG)n	Simple_repeat	1	65	(0)	2336592
451	27.5	12.4	6.6	chr20	45938511	45938798	(18505369)	C	L2b	LINE/L2	(28)	3347	3041	2336600
27	0.0	0.0	0.0	chr20	46021440	46021465	(18422702)	+	(GAAT)n	Simple_repeat	1	26	(0)	2336806
478	22.8	4.5	0.7	chr20	46231311	46231460	(18212707)	+	MER5B	DNA/hAT-Charlie	1	156	(22)	2337237
272	33.6	10.2	7.3	chr20	47368953	47369324	(17074843)	+	L2c	LINE/L2	2526	2909	(510)	2339841
710	21.0	9.8	3.1	chr20	47369377	47369570	(17074597)	+	MIRb	SINE/MIR	27	242	(26)	2339842
319	22.9	22.4	0.0	chr20	47501517	47501634	(16942533)	+	MIR	SINE/MIR	111	262	(0)	2340295
20	19.0	0.0	6.6	chr20	47501914	47501974	(16942193)	+	(GCG)n	Simple_repeat	1	61	(0)	2340296
45	2.4	0.0	0.0	chr20	49446935	49446977	(14997190)	+	(TG)n	Simple_repeat	1	43	(0)	2344442
29	13.1	5.0	0.0	chr20	49483055	49483144	(14961023)	+	(CTTT)n	Simple_repeat	1	94	(0)	2344537
397	29.9	4.5	9.3	chr20	49982121	49982378	(14461789)	+	L2b	LINE/L2	3130	3374	(1)	2345773
1659	13.2	2.6	9.8	chr20	50070892	50071218	(14372949)	+	AluJr	SINE/Alu	10	312	(0)	2346021
191	32.0	8.1	2.3	chr20	50154234	50154361	(14289806)	C	L2b	LINE/L2	(29)	3346	3211	2346211
19	19.2	5.5	1.7	chr20	50731396	50731450	(13712717)	+	(GC)n	Simple_repeat	1	58	(0)	2347595
12	20.1	5.0	0.0	chr20	50870869	50870908	(13573259)	+	G-rich	Low_complexity	1	42	(0)	2347956
24	23.1	0.0	2.9	chr20	56468525	56468593	(7975574)	+	(GCCCC)n	Simple_repeat	1	69	(0)	2359091
13	18.3	5.4	0.0	chr20	56925242	56925278	(7518889)	+	(GCG)n	Simple_repeat	1	39	(0)	2360189
34	40.4	0.0	0.0	chr20	57092358	57092524	(7351643)	+	(CA)n	Simple_repeat	1	167	(0)	2360524
608	24.2	2.1	4.1	chr20	58619898	58620091	(5824076)	C	MIR	SINE/MIR	(13)	249	60	2363250
19	3.5	0.0	3.2	chr20	58652611	58652641	(5791526)	+	(GTTTT)n	Simple_repeat	1	31	(0)	2363301
249	30.0	9.1	0.9	chr20	60589810	60589920	(3854247)	C	LTR89	LTR/ERVL?	(486)	393	273	2366182
314	30.6	8.6	5.2	chr20	61350205	61350528	(3093639)	+	L1MDa	LINE/L1	674	1009	(5624)	2367257
1694	25.5	11.9	5.0	chr20	61436268	61436931	(3007236)	C	MER21C	LTR/ERVL	(94)	844	129	2367376
334	29.8	3.4	0.0	chr20	61436935	61437048	(3007119)	+	L2b	LINE/L2	3242	3359	(16)	2367375
22	22.4	3.9	2.5	chr20	61952051	61952127	(2492040)	+	(GCACAC)n	Simple_repeat	1	80	(0)	2367934
393	34.4	2.8	0.0	chr20	62374465	62374676	(2069491)	+	L1M4	LINE/L1	5581	5798	(376)	2368474
340	22.3	7.4	0.0	chr20	62376911	62377022	(2067145)	C	MER20	DNA/hAT-Charlie	(96)	123	3	2368478
216	34.3	4.5	0.9	chr20	62377042	62377147	(2067020)	+	L2b	LINE/L2	3237	3346	(29)	2368477
1289	22.4	1.4	0.0	chr20	62377200	62377489	(2066678)	+	MER47A	DNA/TcMar-Tigger	73	366	(0)	2368479
12	13.2	5.7	2.7	chr20	62805784	62805818	(1638349)	+	(GCAGG)n	Simple_repeat	1	37	(0)	2368973
12	20.8	3.6	5.3	chr20	62805930	62805984	(1638183)	+	(CCTGCCT)n	Simple_repeat	1	57	(0)	2368974
12	25.4	1.1	2.2	chr20	62972672	62972736	(1471431)	+	G-rich	Low_complexity	1	64	(0)	2369143
584	25.7	10.4	2.7	chr20	63032932	63033460	(1410707)	+	MER45B	DNA/hAT-Tip100	364	978	(62)	2369212
195	31.4	5.5	7.5	chr20	63070129	63070221	(1373946)	C	L3	LINE/CR1	(1763)	2336	2246	2369242
656	23.9	6.9	5.7	chr20	63082608	63082908	(1361259)	+	LTR16E1	LTR/ERVL	216	520	(18)	2369253
81	21.6	1.4	3.2	chr20	63653429	63653646	(790521)	+	G-rich	Low_complexity	1	221	(0)	2369848
16	7.6	7.1	0.0	chr20	63859007	63859034	(585133)	+	(TG)n	Simple_repeat	1	30	(0)	2370140
12	8.1	3.6	3.5	chr20	64036063	64036090	(408077)	+	G-rich	Low_complexity	1	29	(0)	2370444
22	22.0	2.3	5.6	chr20	64083732	64083819	(360348)	+	(CGCCC)n	Simple_repeat	1	90	(0)	2370491
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
14	14.0	2.1	8.2	chr21	26844279	26844326	(19865657)	+	(CTTCGT)n	Simple_repeat	1	49	(0)	2394581
24	15.8	1.7	3.3	chr21	28885363	28885422	(17824561)	+	(CATGCG)n	Simple_repeat	1	61	(0)	2397390
13	8.5	4.0	0.0	chr21	29024590	29024614	(17685369)	+	(GGT)n	Simple_repeat	1	26	(0)	2397622
152	2.8	0.0	0.0	chr21	32771844	32771990	(13937993)	+	(GA)n	Simple_repeat	1	147	(0)	2403728
12	23.7	2.5	0.0	chr21	32772205	32772244	(13937739)	+	GA-rich	Low_complexity	1	41	(0)	2403729
13	16.3	2.8	2.7	chr21	33948350	33948385	(12761598)	+	(CTCCC)n	Simple_repeat	1	37	(0)	2405868
2202	22.5	3.7	7.2	chr21	36820185	36820832	(9889151)	+	MER52D	LTR/ERV1	443	1066	(1057)	2410503
1478	22.3	12.1	8.2	chr21	36990585	36991247	(9718736)	C	MER21C	LTR/ERVL	(130)	808	18	2410806
18	0.0	0.0	0.0	chr21	38473160	38473179	(8236804)	+	(A)n	Simple_repeat	1	20	(0)	2413071
60	22.7	2.3	5.4	chr21	38805637	38805854	(7904129)	+	(CCCCT)n	Simple_repeat	1	223	(0)	2413543
5614	10.0	3.6	1.6	chr21	39638075	39638887	(7071096)	+	LTR1A2	LTR/ERV1	8	837	(0)	2414936
12	11.0	9.8	2.2	chr21	41725672	41725712	(4984271)	+	(GCCTCA)n	Simple_repeat	1	45	(0)	2417935
15	16.9	6.1	1.9	chr21	41766800	41766848	(4943135)	+	(CCCCAG)n	Simple_repeat	1	52	(0)	2417971
1798	16.2	3.1	1.3	chr21	41771745	41772231	(4937752)	C	MER41G	LTR/ERV1	(5)	880	1	2417975
212	24.0	9.4	2.5	chr21	41772633	41772790	(4937193)	+	L2	LINE/L2	2905	3074	(345)	2417973
16	24.7	0.0	0.0	chr21	41954290	41954324	(4755659)	+	(GT)n	Simple_repeat	1	35	(0)	2418220
224	20.4	7.5	1.7	chr21	41954536	41955391	(4754592)	+	(GT)n	Simple_repeat	1	905	(0)	2418221
5587	20.8	3.9	5.9	chr21	42638780	42638955	(4071028)	+	L1MC3	LINE/L1	6402	6583	(1202)	2419121
34842	11.6	3.3	2.9	chr21	42922766	42924948	(3785035)	C	HERVH48-int	LTR/ERV1	(4147)	2507	256	2419570
1966	12.3	0.3	3.9	chr21	43659016	43659324	(3050659)	+	AluJr	SINE/Alu	1	298	(14)	2420579
13	0.0	0.0	4.8	chr21	43659537	43659557	(3050426)	+	(CCG)n	Simple_repeat	1	21	(0)	2420580
2943	9.8	0.0	2.7	chr21	44661543	44661981	(2048002)	C	MSTA	LTR/ERVL-MaLR	(1)	427	1	2422009
15	13.2	0.0	5.4	chr21	45323984	45324020	(1385963)	+	G-rich	Low_complexity	1	37	(0)	2422743
44	0.0	0.0	0.0	chr21	46228816	46228856	(481127)	+	(CCCGCCCCT)n	Simple_repeat	1	41	(0)	2423635
27	24.4	2.2	2.2	chr21	46229094	46229183	(480800)	+	(GGTG)n	Simple_repeat	1	92	(0)	2423636
13	15.5	5.6	0.0	chr21	46229404	46229439	(480544)	+	G-rich	Low_complexity	1	38	(0)	2423637
15	12.2	0.0	0.0	chr22	17120321	17120347	(33698121)	+	(GTG)n	Simple_repeat	1	27	(0)	2428248
15	20.1	0.0	0.0	chr22	17120597	17120630	(33697838)	+	(GCA)n	Simple_repeat	1	34	(0)	2428249
14	18.7	2.2	4.3	chr22	20117136	20117181	(30701287)	+	(CCGC)n	Simple_repeat	1	47	(0)	2432924
11	15.4	8.9	2.0	chr22	20430862	20430906	(30387562)	+	(GGCCACT)n	Simple_repeat	1	49	(0)	2433305
12	31.0	0.0	1.9	chr22	20430944	20430996	(30387472)	+	(CCCCCCT)n	Simple_repeat	1	53	(0)	2433306
442	29.2	13.3	1.0	chr22	20858043	20858246	(29960222)	C	MIRc	SINE/MIR	(32)	236	4	2434076
216	34.1	7.1	0.0	chr22	21001558	21001648	(29816820)	C	MIR	SINE/MIR	(126)	136	39	2434375
12	21.6	0.0	0.0	chr22	21032459	21032490	(29785978)	+	(CCTGCG)n	Simple_repeat	1	32	(0)	2434421
2181	9.8	0.0	0.0	chr22	21567166	21567462	(29251006)	C	AluSx3	SINE/Alu	(14)	297	1	2435441
260	17.0	0.0	0.0	chr22	21567469	21567515	(29250953)	C	L2a	LINE/L2	(5)	3421	3375	2435442
249	31.0	0.0	3.9	chr22	21567526	21567629	(29250839)	+	L2b	LINE/L2	3250	3349	(26)	2435437
14	17.6	0.0	0.0	chr22	21629314	21629345	(29189123)	+	(GCACGT)n	Simple_repeat	1	32	(0)	2435563
16	30.1	0.0	4.0	chr22	21921343	21921416	(28897052)	+	(CCCTG)n	Simple_repeat	1	74	(0)	2436224
12	15.1	2.3	6.8	chr22	21938425	21938467	(28880001)	+	(GAGCGA)n	Simple_repeat	1	44	(0)	2436248
15	19.3	0.0	4.4	chr22	23751116	23751160	(27067308)	+	(GCCCCCG)n	Simple_repeat	1	45	(0)	2438892
12	28.0	2.3	0.0	chr22	23894956	23894999	(26923469)	+	(CGCGG)n	Simple_repeat	1	45	(0)	2439164
12	21.9	3.5	5.0	chr22	24271090	24271147	(26547321)	+	(CCTGCG)n	Simple_repeat	1	60	(0)	2439768
3463	6.0	0.0	0.7	chr22	24691086	24691536	(26126932)	C	LTR7	LTR/ERV1	(2)	448	1	2440483
277	32.8	3.9	5.3	chr22	24875930	24876061	(25942407)	+	MER5A	DNA/hAT-Charlie	59	188	(1)	2440869
15	16.5	6.1	1.9	chr22	24876285	24876333	(25942135)	+	(CTTGGCT)n	Simple_repeat	1	52	(0)	2440870
1094	23.7	13.8	4.6	chr22	24996506	24996917	(25821551)	C	LTR16A1	LTR/ERVL	(0)	456	1	2441198
260	29.2	10.3	2.3	chr22	24996918	24997050	(25821418)	+	MIR3	SINE/MIR	52	196	(12)	2441199
41	0.0	0.0	0.0	chr22	26852221	26852255	(23966213)	+	(CT)n	Simple_repeat	1	35	(0)	2445326
18	18.6	1.8	5.3	chr22	26852256	26852311	(23966157)	+	(CCT)n	Simple_repeat	1	57	(0)	2445327
53	20.5	2.2	2.2	chr22	27075141	27075276	(23743192)	+	GA-rich	Low_complexity	1	139	(0)	2445859
292	28.1	2.0	3.0	chr22	27075540	27075638	(23742830)	+	MIRb	SINE/MIR	91	188	(80)	2445860
17756	7.4	1.2	0.0	chr22	27373053	27375745	(23442723)	+	L1P2	LINE/L1	1	2710	(3436)	2446541
344	31.3	6.7	5.2	chr22	27480284	27480475	(23337993)	C	MIRb	SINE/MIR	(35)	233	39	2446782
11	25.6	0.0	4.3	chr22	27802093	27802138	(23016330)	+	G-rich	Low_complexity	1	46	(0)	2447537
23692	7.0	0.9	0.1	chr22	28209187	28215291	(22603177)	+	L1PA5	LINE/L1	11	6151	(3)	2448144
2461	6.3	0.3	0.0	chr22	28680332	28680630	(22137838)	C	AluY	SINE/Alu	(11)	300	1	2448923
21	3.0	2.6	5.1	chr22	29206517	29206557	(21611911)	+	(TGTT)n	Simple_repeat	1	39	(0)	2450112
14	22.2	5.5	3.9	chr22	29481001	29481080	(21337388)	+	(GCGACGC)n	Simple_repeat	1	81	(0)	2450661
216	31.0	6.2	2.3	chr22	29481847	29482023	(21336445)	+	MIR3	SINE/MIR	39	225	(43)	2450662
392	24.4	2.3	9.3	chr22	29579728	29579815	(21238653)	C	MIRb	SINE/MIR	(70)	198	116	2450905
11	25.3	0.0	5.8	chr22	29580899	29580950	(21237518)	+	(CAGCCC)n	Simple_repeat	1	52	(0)	2450909
287	24.8	10.6	0.0	chr22	29581240	29581340	(21237128)	+	MIR3	SINE/MIR	43	155	(53)	2450910
486	30.3	1.4	1.3	chr22	30561449	30561606	(20256862)	C	MIR3	SINE/MIR	(113)	155	3	2452911
248	25.7	1.2	11.1	chr22	30561793	30561931	(20256537)	+	MIRc	SINE/MIR	31	157	(105)	2452912
249	27.4	20.4	0.0	chr22	30694008	30694124	(20124344)	C	Charlie4z	DNA/hAT-Charlie	(7)	160	14	2453198
16	7.8	0.0	3.5	chr22	30802854	30802882	(20015586)	+	(GGCG)n	Simple_repeat	1	29	(0)	2453437
21	17.4	2.2	0.0	chr22	30803073	30803118	(20015350)	+	(GCG)n	Simple_repeat	1	47	(0)	2453438
16	0.0	0.0	0.0	chr22	31269966	31269985	(19548483)	+	(AGG)n	Simple_repeat	1	20	(0)	2454411
17	20.2	4.8	4.6	chr22	31346017	31346078	(19472390)	+	(CG)n	Simple_repeat	1	65	(0)	2454547
14	20.8	6.0	0.0	chr22	32176044	32176093	(18642375)	+	(GCCCGCT)n	Simple_repeat	1	53	(0)	2456510
14	4.5	4.3	0.0	chr22	32176160	32176182	(18642286)	+	(GCC)n	Simple_repeat	1	24	(0)	2456511
15	25.5	0.0	4.9	chr22	33921070	33921130	(16897338)	+	(CGGCGC)n	Simple_repeat	1	61	(0)	2460048
1460	20.1	5.8	1.7	chr22	35399548	35399846	(15418622)	+	AluJb	SINE/Alu	1	312	(0)	2462903
1381	18.8	6.5	2.1	chr22	35539493	35539829	(15278639)	+	MER113	DNA/hAT-Charlie	121	473	(48)	2463255
73	1.5	0.0	0.0	chr22	36703761	36703827	(14114641)	+	(CT)n	Simple_repeat	1	67	(0)	2465663
2209	9.3	0.3	0.3	chr22	36980482	36980771	(13837697)	C	AluSc	SINE/Alu	(7)	302	13	2466242
1622	18.0	6.6	5.3	chr22	36980772	36981048	(13837420)	C	MSTA	LTR/ERVL-MaLR	(137)	291	1	2466241
200	33.8	3.8	0.0	chr22	37188624	37188700	(13629768)	+	MIRb	SINE/MIR	1	80	(188)	2466692
224	24.6	8.0	0.0	chr22	37188739	37188807	(13629661)	+	L2a	LINE/L2	3350	3424	(2)	2466693
224	32.6	11.8	2.2	chr22	37488587	37488724	(13329744)	C	L2c	LINE/L2	(217)	3170	3018	2467354
16	18.0	4.5	0.0	chr22	37608817	37608860	(13209608)	+	G-rich	Low_complexity	1	46	(0)	2467651
30	3.1	0.0	0.0	chr22	37805259	37805291	(13013177)	+	(GAGGCA)n	Simple_repeat	1	33	(0)	2468119
312	28.7	3.2	2.4	chr22	38034346	38034469	(12783999)	+	MIRb	SINE/MIR	40	163	(67)	2468664
466	23.7	10.5	1.1	chr22	38034524	38034679	(12783789)	+	MIR	SINE/MIR	3	170	(92)	2468665
19	8.3	0.0	0.0	chr22	38397518	38397543	(12420925)	+	(A)n	Simple_repeat	1	26	(0)	2469394
17	16.7	0.0	0.0	chr22	38682063	38682096	(12136372)	+	GA-rich	Low_complexity	1	34	(0)	2470102
16	4.3	0.0	3.9	chr22	38824868	38824893	(11993575)	+	(CTC)n	Simple_repeat	1	26	(0)	2470347
2327	5.4	0.4	0.4	chr22	39311316	39311595	(11506873)	C	AluYc	SINE/Alu	(19)	280	1	2471356
30	0.0	5.7	0.0	chr22	39399587	39399621	(11418847)	+	(ACA)n	Simple_repeat	1	37	(0)	2471577
364	26.0	0.9	0.9	chr22	39997904	39998008	(10820460)	C	MIRc	SINE/MIR	(75)	193	89	2472686
268	29.4	1.4	0.0	chr22	40177344	40177425	(10641043)	+	MIRc	SINE/MIR	37	129	(139)	2473081
15	23.0	1.6	4.8	chr22	40346732	40346792	(10471676)	+	G-rich	Low_complexity	1	62	(0)	2473378
13	25.9	2.2	0.0	chr22	40683116	40683166	(10135302)	+	(CCCCAAG)n	Simple_repeat	1	52	(0)	2474091
15	13.5	0.0	10.0	chr22	41448444	41448493	(9369975)	+	(CCCCCT)n	Simple_repeat	1	50	(0)	2475930
12	18.4	7.7	0.0	chr22	41448469	41448507	(9369961)	+	(CCTTC)n	Simple_repeat	1	42	(0)	2475931
15	17.7	2.1	4.1	chr22	41620709	41620756	(9197712)	+	(CCTGCCC)n	Simple_repeat	1	49	(0)	2476343
290	32.7	13.6	0.6	chr22	42065471	42065630	(8752838)	C	MER5A	DNA/hAT-Charlie	(5)	184	1	2477362
439	32.1	2.1	0.0	chr22	42294645	42294784	(8523684)	C	MIRb	SINE/MIR	(37)	231	89	2477744
39	23.8	4.6	5.4	chr22	42303765	42303959	(8514509)	+	G-rich	Low_complexity	1	204	(0)	2477763
195	36.1	1.0	1.0	chr22	42444743	42444840	(8373628)	C	MIRc	SINE/MIR	(3)	265	168	2478067
12	20.5	2.0	5.9	chr22	42582071	42582120	(8236348)	+	(CGCC)n	Simple_repeat	1	51	(0)	2478423
2246	12.9	0.0	0.0	chr22	43406896	43407198	(7411270)	C	AluSq2	SINE/Alu	(10)	303	1	2480180
345	30.0	10.4	5.9	chr22	43407411	43407679	(7410789)	+	MIRb	SINE/MIR	4	260	(8)	2480181
318	32.8	1.7	0.0	chr22	43862809	43862924	(6955544)	C	L2a	LINE/L2	(2)	3424	3307	2480892
1333	19.0	16.4	1.6	chr22	43868171	43868614	(6949854)	C	LTR49	LTR/ERV1	(72)	523	1	2480907
298	28.7	3.8	6.4	chr22	43891404	43891614	(6926854)	+	MIRb	SINE/MIR	23	233	(35)	2480956
12	14.7	3.7	8.9	chr22	43923847	43923900	(6894568)	+	(GACCC)n	Simple_repeat	1	56	(0)	2481024
15	3.8	7.4	0.0	chr22	43923885	43923911	(6894557)	+	(CCG)n	Simple_repeat	1	29	(0)	2481025
229	31.7	0.0	5.8	chr22	44148046	44148132	(6670336)	+	UCON29	DNA/PiggyBac?	1	82	(357)	2481436
240	32.8	1.5	3.0	chr22	44736085	44736219	(6082249)	+	L2	LINE/L2	2679	2811	(608)	2482531
182	37.7	2.5	0.0	chr22	44808311	44808387	(6010081)	+	L3b	LINE/CR1	4901	4979	(253)	2482692
14	15.3	2.6	2.6	chr22	44808528	44808565	(6009903)	+	(GTGGAGG)n	Simple_repeat	1	39	(0)	2482693
19	12.1	0.0	0.0	chr22	44808641	44808668	(6009800)	+	(T)n	Simple_repeat	1	28	(0)	2482694
2024	13.7	0.0	1.4	chr22	44975885	44976177	(5842291)	+	AluJb	SINE/Alu	1	289	(23)	2482976
184	24.6	1.7	1.7	chr22	45061646	45061703	(5756765)	+	MIRc	SINE/MIR	124	181	(87)	2483148
1777	14.2	6.0	1.7	chr22	45082483	45082771	(5735697)	+	AluSx	SINE/Alu	1	302	(10)	2483202
232	32.1	20.0	2.5	chr22	45082772	45082889	(5735579)	C	L2a	LINE/L2	(836)	2583	2463	2483201
263	33.6	5.5	10.9	chr22	45082999	45083265	(5735203)	+	L2c	LINE/L2	3114	3365	(22)	2483203
192	27.4	5.2	8.9	chr22	45285339	45285518	(5532950)	C	L2c	LINE/L2	(297)	3090	2918	2483620
223	13.2	0.0	0.0	chr22	45285840	45285877	(5532591)	+	L2b	LINE/L2	3320	3357	(18)	2483621
17	21.1	4.1	0.0	chr22	45671885	45671933	(5146535)	+	(CGG)n	Simple_repeat	1	51	(0)	2484357
33	19.3	0.0	3.7	chr22	45671955	45672036	(5146432)	+	(CCT)n	Simple_repeat	1	82	(0)	2484358
217	29.8	6.0	1.1	chr22	45966876	45966970	(4851498)	C	L3	LINE/CR1	(55)	4044	3945	2484811
1590	20.6	9.5	3.2	chr22	46335153	46335459	(4483009)	C	MER4B	LTR/ERV1	(263)	347	2	2485393
12	10.0	0.0	0.0	chr22	46367900	46367921	(4450547)	+	(CTCC)n	Simple_repeat	1	22	(0)	2485430
245	30.7	8.0	1.6	chr22	46368202	46368330	(4450138)	+	MIR	SINE/MIR	56	193	(69)	2485431
1550	26.1	6.6	1.3	chr22	48171333	48171861	(2646607)	+	LTR75	LTR/ERVL	1	559	(3)	2487914
17	10.8	0.0	0.0	chr22	49209024	49209053	(1609415)	+	(CATT)n	Simple_repeat	1	30	(0)	2489109
317	23.8	2.4	1.2	chr22	49536528	49536608	(1281860)	C	MER67B	LTR/ERV1	(1)	660	579	2489486
698	18.6	4.7	0.1	chr22	49536594	49536776	(1281692)	C	MER31A	LTR/ERV1	(87)	379	178	2489487
342	25.0	5.1	2.6	chr22	49536803	49536917	(1281551)	C	MER31A	LTR/ERV1	(348)	118	1	2489487
34	36.0	0.0	4.0	chr22	49970634	49970807	(847661)	+	(GT)n	Simple_repeat	1	174	(0)	2490008
16	22.3	4.5	2.9	chr22	50293477	50293542	(524926)	+	(GCCCA)n	Simple_repeat	1	69	(0)	2490406
12	23.6	0.0	0.0	chr3	3126957	3126991	(195168568)	+	(GGCGGC)n	Simple_repeat	1	35	(0)	2496960
21862	9.2	0.6	3.5	chr3	4071179	4076717	(194218842)	+	L1PA6	LINE/L1	5	5362	(784)	2498435
29	17.9	3.8	2.4	chr3	4493401	4493479	(193802080)	+	GA-rich	Low_complexity	1	82	(0)	2499109
184	28.1	9.5	0.0	chr3	4493834	4493890	(193801669)	C	OldhAT1	DNA/hAT-Ac	(1409)	1439	1377	2499110
30	17.1	3.0	0.0	chr3	5122066	5122131	(193173428)	+	(AATG)n	Simple_repeat	1	68	(0)	2500268
320	30.4	3.4	10.5	chr3	9362688	9362878	(188932681)	+	MIRb	SINE/MIR	83	259	(9)	2507068
16	0.0	0.0	0.0	chr3	9399828	9399844	(188895715)	+	(A)n	Simple_repeat	1	17	(0)	2507137
13	17.9	2.4	4.7	chr3	9403059	9403100	(188892459)	+	GA-rich	Low_complexity	1	43	(0)	2507138
30	26.0	0.0	2.3	chr3	9731741	9731827	(188563732)	+	(CGC)n	Simple_repeat	1	87	(0)	2507838
201	26.7	9.6	1.3	chr3	9843710	9843785	(188451774)	C	MIR3	SINE/MIR	(17)	191	109	2508087
403	27.3	9.6	0.0	chr3	9914951	9915100	(188380459)	+	MER91A	DNA/hAT-Tip100	20	185	(11)	2508245
2420	6.9	0.7	0.3	chr3	9986936	9987241	(188308318)	+	AluY	SINE/Alu	3	309	(2)	2508419
227	25.0	5.0	0.0	chr3	10142262	10142337	(188153222)	C	MIRc	SINE/MIR	(121)	147	68	2508745
331	30.1	12.1	1.9	chr3	10248046	10248201	(188047358)	+	MIRb	SINE/MIR	60	233	(35)	2509044
412	27.2	13.7	1.0	chr3	10594754	10594957	(187700602)	C	MIRb	SINE/MIR	(13)	255	22	2509733
323	25.4	12.1	1.4	chr3	10816917	10817056	(187478503)	C	MIRb	SINE/MIR	(14)	254	98	2510176
12	5.5	0.0	0.0	chr3	13141950	13141968	(185153591)	+	(GCA)n	Simple_repeat	1	19	(0)	2514715
218	34.9	2.0	2.7	chr3	13142195	13142344	(185153215)	C	MIR3	SINE/MIR	(13)	195	47	2514716
343	33.6	5.8	1.3	chr3	13296935	13297163	(184998396)	+	MIRb	SINE/MIR	5	244	(24)	2514989
466	28.8	14.2	1.7	chr3	13461224	13461520	(184834039)	C	MamGypLTR3a	LTR/Gypsy	(586)	395	62	2515296
363	26.0	8.0	5.9	chr3	13461708	13461928	(184833631)	+	MamGypLTR3a	LTR/Gypsy	652	877	(104)	2515297
623	26.4	11.5	0.4	chr3	13650226	13650472	(184645087)	C	L2c	LINE/L2	(79)	3308	3031	2515680
17	29.9	0.0	0.0	chr3	13650691	13650747	(184644812)	+	(GCGGT)n	Simple_repeat	1	57	(0)	2515681
14	15.4	6.7	2.1	chr3	13650739	13650783	(184644776)	+	(GGCCA)n	Simple_repeat	1	48	(0)	2515682
343	20.9	10.8	3.4	chr3	13650819	13650937	(184644622)	+	Charlie4a	DNA/hAT-Charlie	25	153	(355)	2515683
220	28.7	4.7	1.5	chr3	14422291	14422408	(183873151)	+	MIR1_Amn	SINE/MIR	55	176	(92)	2516928
23	29.8	2.1	2.0	chr3	15859410	15859506	(182436053)	+	(CGC)n	Simple_repeat	1	99	(0)	2519512
17270	2.6	0.0	0.0	chr3	17858275	17861391	(180434168)	C	L1HS	LINE/L1	(2902)	3244	127	2522495
27612	2.5	0.8	0.0	chr3	19097369	19103347	(179192212)	C	L1PA2	LINE/L1	(5)	6150	124	2524202
26172	2.6	0.1	0.0	chr3	19855049	19861075	(178434484)	+	L1PA2	LINE/L1	124	6153	(2)	2525206
23833	7.3	1.0	0.1	chr3	23030418	23036543	(175259016)	C	L1PA6	LINE/L1	(1)	6338	1	2529551
10536	11.9	2.8	0.9	chr3	23286974	23288730	(175006829)	C	L1MA3	LINE/L1	(2038)	5527	3737	2529950
1759	15.4	2.8	0.4	chr3	23288867	23289146	(175006413)	C	L1MA3	LINE/L1	(7262)	303	17	2529950
30	20.9	4.4	1.1	chr3	23805827	23805918	(174489641)	+	G-rich	Low_complexity	1	95	(0)	2530810
20	9.7	0.0	2.8	chr3	31532887	31532922	(166762637)	+	(CCT)n	Simple_repeat	1	36	(0)	2542253
14	18.9	4.5	2.2	chr3	31533127	31533170	(166762389)	+	(GGC)n	Simple_repeat	1	46	(0)	2542254
17	14.2	0.0	0.0	chr3	32816652	32816682	(165478877)	+	(GAG)n	Simple_repeat	1	31	(0)	2544751
374	20.3	7.2	3.8	chr3	32836254	32836386	(165459173)	C	L1ME3G	LINE/L1	(715)	209	72	2544782
12	19.9	0.0	0.0	chr3	33798625	33798653	(164496906)	+	(CAGC)n	Simple_repeat	1	29	(0)	2546482
15	14.8	2.6	2.5	chr3	36380394	36380432	(161915127)	+	(GGCGG)n	Simple_repeat	1	40	(0)	2549821
12	16.9	8.3	1.9	chr3	36380462	36380509	(161915050)	+	G-rich	Low_complexity	1	52	(0)	2549822
14	18.3	5.8	5.5	chr3	37176559	37176627	(161118932)	+	(GGAGGCC)n	Simple_repeat	1	73	(0)	2551103
280	26.8	7.6	0.0	chr3	38039699	38039795	(160255764)	C	L2a	LINE/L2	(27)	3399	3295	2552430
18	17.6	3.6	3.5	chr3	38165766	38165820	(160129739)	+	(GGC)n	Simple_repeat	1	57	(0)	2552612
15	4.7	0.0	0.0	chr3	38346826	38346847	(159948712)	+	(CGGA)n	Simple_repeat	1	22	(0)	2552903
13	11.0	0.0	6.1	chr3	38455466	38455498	(159840061)	+	G-rich	Low_complexity	1	33	(0)	2553074
234	25.5	3.8	3.8	chr3	39153892	39153997	(159141562)	C	MIR3	SINE/MIR	(40)	168	63	2554044
246	31.1	4.3	6.9	chr3	39154505	39154649	(159140910)	+	L2c	LINE/L2	3025	3165	(222)	2554045
14702	8.0	1.8	0.9	chr3	41277830	41279783	(157015776)	+	L1PA6	LINE/L1	5	1977	(4207)	2557269
1931	25.6	2.7	3.5	chr3	41629065	41629664	(156665895)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	1	2557717
25	12.9	0.0	0.0	chr3	42600912	42600955	(155694604)	+	(CCCCGC)n	Simple_repeat	1	44	(0)	2559377
192	23.8	4.5	0.0	chr3	42655112	42655174	(155640385)	+	MIR3	SINE/MIR	64	129	(79)	2559444
181	30.2	3.6	0.0	chr3	42667873	42667925	(155627634)	C	L2b	LINE/L2	(50)	3325	3271	2559454
20	32.8	2.8	0.0	chr3	43894415	43894486	(154401073)	+	(GC)n	Simple_repeat	1	74	(0)	2561332
1441	7.8	0.0	0.0	chr3	44532776	44532955	(153762604)	C	AluSx	SINE/Alu	(8)	304	125	2562268
197	32.9	6.8	0.0	chr3	44532990	44533071	(153762488)	+	L2b	LINE/L2	3282	3369	(6)	2562265
14	19.1	0.0	2.6	chr3	45388444	45388481	(152907078)	+	(GCCCC)n	Simple_repeat	1	38	(0)	2563751
4056	15.3	4.2	0.3	chr3	45572190	45572871	(152722688)	+	MER50	LTR/ERV1	1	710	(24)	2564066
2677	18.5	5.3	5.4	chr3	45572925	45573249	(152722310)	+	MER21C	LTR/ERVL	199	523	(415)	2564065
193	27.6	11.1	1.0	chr3	45593479	45593586	(152701973)	+	MIR	SINE/MIR	40	158	(50)	2564110
489	21.8	4.7	2.1	chr3	46488743	46488887	(151806672)	+	LTR41B	LTR/ERVL	19	167	(591)	2565464
2405	7.5	0.6	4.0	chr3	46576188	46576508	(151719051)	+	AluSx1	SINE/Alu	1	310	(2)	2565627
2272	9.7	0.0	2.6	chr3	46584377	46584684	(151710875)	+	AluSz	SINE/Alu	1	300	(12)	2565639
664	25.8	1.3	1.9	chr3	46584882	46585039	(151710520)	C	LTR16A	LTR/ERVL	(174)	277	121	2565640
1183	6.9	0.0	5.3	chr3	46587186	46587354	(151708205)	+	L1PBa	LINE/L1	280	439	(6423)	2565644
13	22.5	2.0	3.9	chr3	46812591	46812640	(151482919)	+	G-rich	Low_complexity	1	51	(0)	2565967
12	24.1	0.0	0.0	chr3	46982086	46982119	(151313440)	+	(GCCT)n	Simple_repeat	1	34	(0)	2566219
29	13.9	0.0	3.4	chr3	47475821	47475879	(150819680)	+	(GCG)n	Simple_repeat	1	59	(0)	2567225
13	21.1	2.6	0.0	chr3	48089099	48089136	(150206423)	+	(TGCGGCC)n	Simple_repeat	1	39	(0)	2568629
749	17.6	3.1	8.8	chr3	48089409	48089613	(150205946)	+	MER33	DNA/hAT-Charlie	27	219	(105)	2568630
2217	9.9	0.0	1.0	chr3	48474323	48474636	(149820923)	C	AluSx	SINE/Alu	(1)	311	1	2569369
264	31.7	7.2	5.3	chr3	48474703	48475109	(149820450)	+	L2b	LINE/L2	2949	3367	(20)	2569370
13	9.0	4.9	7.0	chr3	49007806	49007846	(149287713)	+	(GGAGCGC)n	Simple_repeat	1	43	(0)	2570462
22	21.8	1.7	1.6	chr3	49007905	49007964	(149287595)	+	GA-rich	Low_complexity	1	61	(0)	2570463
26	21.6	1.6	0.0	chr3	49093912	49093975	(149201584)	+	(CCG)n	Simple_repeat	1	65	(0)	2570661
11	28.5	4.9	3.5	chr3	49340061	49340142	(148955417)	+	(CGCGCCG)n	Simple_repeat	1	86	(0)	2571124
310	24.7	2.2	7.3	chr3	49422943	49423038	(148872521)	C	L2c	LINE/L2	(2)	3385	3295	2571315
20	9.2	2.9	0.0	chr3	49461846	49461880	(148833679)	+	(CCT)n	Simple_repeat	1	36	(0)	2571432
251	33.7	12.1	1.9	chr3	49461977	49462395	(148833164)	+	L2c	LINE/L2	2923	3385	(2)	2571433
47	2.2	0.0	0.0	chr3	49673796	49673842	(148621717)	+	(CTCACG)n	Simple_repeat	1	47	(0)	2571786
17	6.3	2.7	5.3	chr3	49724202	49724238	(148571321)	+	(GCCCCG)n	Simple_repeat	1	38	(0)	2571830
14	18.9	4.8	0.0	chr3	49903903	49903944	(148391615)	+	(GCCGG)n	Simple_repeat	1	44	(0)	2572174
14	11.0	0.0	5.9	chr3	50337380	50337417	(147958142)	+	(GCGTGC)n	Simple_repeat	1	35	(0)	2572924
12	16.9	0.0	0.0	chr3	50341022	50341048	(147954511)	+	(CCTT)n	Simple_repeat	1	27	(0)	2572929
18	25.1	1.9	1.8	chr3	51499927	51499980	(146795579)	+	(CA)n	Simple_repeat	1	55	(0)	2574460
17	13.4	2.9	2.8	chr3	51500024	51500058	(146795501)	+	(CG)n	Simple_repeat	1	36	(0)	2574461
33	0.0	0.0	0.0	chr3	51500117	51500152	(146795407)	+	(A)n	Simple_repeat	1	36	(0)	2574462
24	24.2	3.6	2.4	chr3	51706982	51707105	(146588454)	+	G-rich	Low_complexity	1	125	(0)	2574851
92	29.9	1.6	4.1	chr3	52410122	52410550	(145885009)	+	G-rich	Low_complexity	1	436	(0)	2575858
19	19.5	2.1	0.0	chr3	52533909	52533955	(145761604)	+	G-rich	Low_complexity	1	48	(0)	2575997
239	27.3	2.2	5.4	chr3	53254693	53254785	(145040774)	C	MIRb	SINE/MIR	(79)	189	100	2577295
180	33.0	13.9	2.2	chr3	53846820	53847002	(144448557)	+	MIRb	SINE/MIR	31	238	(30)	2578144
27652	2.2	0.1	0.5	chr3	53921748	53927805	(144367754)	C	L1PA2	LINE/L1	(1)	6154	124	2578250
496	26.4	7.0	3.9	chr3	54630486	54630666	(143664893)	C	MER103C	DNA/hAT-Charlie	(102)	195	9	2579322
3497	5.8	0.0	0.9	chr3	54639753	54640204	(143655355)	C	LTR7	LTR/ERV1	(2)	448	1	2579332
28	24.1	0.0	0.0	chr3	55485487	55485549	(142810010)	+	(AC)n	Simple_repeat	1	63	(0)	2580515
18	6.0	11.4	0.0	chr3	55485745	55485779	(142809780)	+	GA-rich	Low_complexity	1	39	(0)	2580516
15531	12.6	2.5	3.1	chr3	56494950	56495112	(141800447)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	2249	2582241
13	20.3	3.6	5.2	chr3	57597457	57597512	(140698047)	+	(CGCCTG)n	Simple_repeat	1	58	(0)	2584256
655	26.1	6.6	0.5	chr3	57970250	57970449	(140325110)	+	MIR	SINE/MIR	47	259	(3)	2585056
945	25.4	8.1	2.6	chr3	58306734	58307373	(139988186)	C	L2a	LINE/L2	(0)	3426	2741	2585764
229	29.3	17.6	0.6	chr3	58434127	58434291	(139861268)	C	L3	LINE/CR1	(15)	4084	3886	2586005
27780	1.9	0.1	0.0	chr3	58842155	58848179	(139447380)	+	L1PA2	LINE/L1	127	6154	(1)	2586705
3253	17.4	7.0	1.6	chr3	60772469	60773147	(137522412)	+	LTR8A	LTR/ERV1	10	727	(0)	2589492
16	5.3	0.0	0.0	chr3	61560968	61560987	(136734572)	+	(A)n	Simple_repeat	1	20	(0)	2590826
16	12.1	0.0	0.0	chr3	62189184	62189211	(136106348)	+	(TCCC)n	Simple_repeat	1	28	(0)	2591911
24562	5.3	0.8	0.1	chr3	63255613	63261711	(135033848)	+	L1PA3	LINE/L1	2	6137	(18)	2593720
25340	4.1	0.3	0.4	chr3	63645171	63651333	(134644226)	+	L1PA4	LINE/L1	1	6152	(3)	2594406
14	14.6	0.0	3.1	chr3	63912111	63912142	(134383417)	+	(CGGA)n	Simple_repeat	1	32	(0)	2594888
26929	1.8	0.0	0.0	chr3	65509293	65515316	(132780243)	+	L1PA2	LINE/L1	125	6149	(6)	2597534
19	22.1	0.0	0.0	chr3	66039219	66039265	(132256294)	+	(CACGCT)n	Simple_repeat	1	47	(0)	2598519
33	2.9	0.0	0.0	chr3	66442441	66442475	(131853084)	+	(GAG)n	Simple_repeat	1	35	(0)	2599221
2666	20.6	0.6	1.5	chr3	66532059	66532595	(131762964)	+	MER74A	LTR/ERVL	1	532	(26)	2599352
331	26.3	7.9	8.4	chr3	66572909	66573074	(131722485)	+	MamGypLTR3a	LTR/Gypsy	114	278	(703)	2599450
25035	4.5	0.1	0.0	chr3	66842802	66848943	(131446616)	+	L1PA3	LINE/L1	5	6152	(3)	2599985
157	22.9	4.5	1.2	chr3	72337237	72337700	(125957859)	+	(GT)n	Simple_repeat	1	485	(0)	2608982
6226	17.6	8.9	1.2	chr3	75101236	75102410	(123193149)	C	L1MA3	LINE/L1	(6283)	1282	9	2613708
25769	5.1	1.5	0.3	chr3	75845059	75851126	(122444433)	C	L1PA5	LINE/L1	(1)	6153	1	2614775
16	13.9	2.3	4.4	chr3	81427075	81427118	(116868441)	+	(AGAACAA)n	Simple_repeat	1	45	(0)	2622054
7349	21.6	2.4	2.3	chr3	84758755	84760390	(113535169)	+	L1PBa	LINE/L1	3	1640	(5223)	2626155
27259	3.2	0.1	0.2	chr3	89939077	89945113	(108350446)	C	L1PA3	LINE/L1	(0)	6155	126	2632589
27625	2.4	0.1	0.0	chr3	89957834	89963855	(108331704)	+	L1PA2	LINE/L1	125	6155	(0)	2632609
22754	12.7	2.1	1.2	chr3	97003654	97010051	(101285508)	C	L1PA8A	LINE/L1	(1)	6445	1	2637272
13	13.6	2.9	2.9	chr3	97821959	97821992	(100473567)	+	G-rich	Low_complexity	1	35	(0)	2638281
27540	2.7	0.0	0.1	chr3	97904738	97910773	(100384786)	C	L1PA3	LINE/L1	(0)	6155	124	2638366
17	18.6	0.0	7.0	chr3	98902062	98902118	(99393441)	+	(CCTCGCT)n	Simple_repeat	1	57	(0)	2639607
17665	7.3	0.5	1.4	chr3	101466715	101469542	(96826017)	+	L1PA6	LINE/L1	5	2771	(3375)	2643030
40	2.5	0.0	0.0	chr3	101849216	101849256	(96446303)	+	(GGAGGCG)n	Simple_repeat	1	41	(0)	2643700
20	9.8	6.8	0.0	chr3	101849316	101849359	(96446200)	+	G-rich	Low_complexity	1	47	(0)	2643701
4700	11.7	5.0	3.8	chr3	105504112	105504931	(92790628)	C	LTR1A2	LTR/ERV1	(0)	837	7	2648360
27525	3.1	0.1	0.1	chr3	107692205	107698221	(90597338)	C	L1PA3	LINE/L1	(10)	6145	126	2651227
2221	19.9	3.0	1.0	chr3	109234096	109234592	(89060967)	+	L1PA8	LINE/L1	2	508	(5367)	2653481
8695	13.8	1.9	1.5	chr3	109234593	109236100	(89059459)	+	L1PA8	LINE/L1	725	2238	(4245)	2653481
237	31.6	7.2	5.0	chr3	109326084	109326366	(88969193)	+	L1MEj	LINE/L1	1724	2013	(147)	2653676
21	10.8	0.0	0.0	chr3	109337818	109337847	(88957712)	+	(A)n	Simple_repeat	1	30	(0)	2653699
15	24.9	1.9	1.8	chr3	112086265	112086318	(86209241)	+	(CCGCT)n	Simple_repeat	1	55	(0)	2657367
20	19.5	7.8	4.5	chr3	113241914	113242016	(85053543)	+	GA-rich	Low_complexity	1	111	(0)	2658941
26	23.7	4.1	6.5	chr3	115623333	115623479	(82672080)	+	GA-rich	Low_complexity	1	153	(0)	2662366
12	24.4	3.2	4.6	chr3	115784294	115784356	(82511203)	+	G-rich	Low_complexity	1	65	(0)	2662585
23	28.4	2.0	3.0	chr3	115784357	115784388	(82511171)	+	(GCGG)n	Simple_repeat	5	101	(0)	2662586
578	30.6	8.0	3.5	chr3	117045088	117045432	(81250127)	C	LTR16A	LTR/ERVL	(78)	373	12	2664307
22258	7.4	0.9	0.5	chr3	119130084	119136227	(79159332)	+	L1PA6	LINE/L1	1	6154	(0)	2667129
293	29.7	4.1	4.1	chr3	119241130	119241252	(79054307)	C	MIRb	SINE/MIR	(47)	221	99	2667269
243	24.2	13.3	0.0	chr3	119323684	119323774	(78971785)	+	MIRc	SINE/MIR	50	154	(114)	2667377
13	18.9	2.8	0.0	chr3	119579862	119579897	(78715662)	+	(CCCCGCC)n	Simple_repeat	1	37	(0)	2667826
20473	8.6	2.0	0.7	chr3	120003777	120009853	(78285706)	+	L1PA7	LINE/L1	5	6154	(0)	2668482
12	8.8	4.2	0.0	chr3	120094347	120094370	(78201189)	+	(TCCT)n	Simple_repeat	1	25	(0)	2668616
19	0.0	0.0	0.0	chr3	120094385	120094408	(78201151)	+	(GGC)n	Simple_repeat	1	24	(0)	2668617
19	18.3	0.0	5.5	chr3	120094480	120094485	(78201074)	+	(TCCCCC)n	Simple_repeat	1	54	(0)	2668618
22	11.7	4.2	2.0	chr3	120094486	120094533	(78201026)	+	(CTC)n	Simple_repeat	1	50	(0)	2668619
19	23.1	4.0	2.6	chr3	120285175	120285248	(78010311)	+	(GCGCCGG)n	Simple_repeat	1	77	(0)	2668922
13	5.2	0.0	0.0	chr3	120349090	120349109	(77946450)	+	(GCA)n	Simple_repeat	1	20	(0)	2669018
12	18.6	0.0	7.1	chr3	120451293	120451334	(77844225)	+	(GGC)n	Simple_repeat	1	42	(0)	2669169
17317	6.8	1.1	0.1	chr3	120719121	120721943	(77573616)	+	L1PA4	LINE/L1	1	2846	(3300)	2669585
13	5.3	0.0	0.0	chr3	120908373	120908392	(77387167)	+	(CGC)n	Simple_repeat	1	20	(0)	2669849
24	9.5	0.0	0.0	chr3	120908416	120908449	(77387110)	+	(TG)n	Simple_repeat	1	34	(0)	2669850
25	10.6	0.0	0.0	chr3	120908449	120908489	(77387070)	+	(GAGAGA)n	Simple_repeat	1	41	(0)	2669851
21896	11.4	2.2	1.3	chr3	121057984	121064434	(77231125)	C	L1PA7	LINE/L1	(7)	6462	2	2669996
21045	9.4	2.0	2.4	chr3	121106243	121112620	(77182939)	C	L1PA10	LINE/L1	(1)	6352	5	2670027
12567	9.2	0.9	0.1	chr3	121450589	121452422	(76843137)	C	L1P1	LINE/L1	(4305)	1850	2	2670399
26321	2.7	0.0	0.0	chr3	121932761	121938786	(76356773)	C	L1PA3	LINE/L1	(0)	6155	130	2671233
5386	8.3	0.1	1.2	chr3	122442830	122443535	(75852024)	+	L1PA6	LINE/L1	1	702	(5482)	2672006
24	14.7	0.0	0.0	chr3	122986687	122986731	(75308828)	+	(ACACAC)n	Simple_repeat	1	45	(0)	2672928
13	21.8	2.7	0.0	chr3	123449007	123449043	(74846516)	+	(CGG)n	Simple_repeat	1	38	(0)	2673715
390	24.7	1.2	0.0	chr3	125039240	125039320	(73256239)	C	UCON4	Unknown	(200)	103	22	2676327
14	17.4	0.0	2.9	chr3	125212091	125212125	(73083434)	+	G-rich	Low_complexity	1	35	(0)	2676636
35	10.0	0.0	0.0	chr3	125375248	125375302	(72920257)	+	(CTC)n	Simple_repeat	1	55	(0)	2676882
26677	2.4	0.0	0.1	chr3	125936639	125942696	(72352863)	+	L1PA2	LINE/L1	125	6155	(0)	2677921
258	36.3	3.5	9.5	chr3	126703553	126703890	(71591669)	+	L2b	LINE/L2	3058	3374	(1)	2678968
12	7.5	6.7	3.1	chr3	127002441	127002470	(71293089)	+	(GCCCT)n	Simple_repeat	1	32	(0)	2679383
259	13.6	1.5	1.5	chr3	127162792	127162858	(71132701)	+	MER33	DNA/hAT-Charlie	208	274	(50)	2679614
280	31.6	5.4	6.6	chr3	127457412	127457740	(70837819)	+	L1ME3G	LINE/L1	530	806	(118)	2680069
13	18.9	2.8	0.0	chr3	127537018	127537053	(70758506)	+	(GGAGGTG)n	Simple_repeat	1	37	(0)	2680202
322	27.5	5.7	6.9	chr3	127628620	127628779	(70666780)	C	MIR3	SINE/MIR	(45)	163	6	2680396
452	11.3	11.0	1.0	chr3	127914920	127915017	(70380542)	C	MER53	DNA/hAT	(84)	109	1	2680908
2506	8.1	13.9	22.3	chr3	128152657	128153231	(70142328)	C	LTR12F	LTR/ERV1	(0)	519	1	2681287
15	17.6	1.7	8.2	chr3	128153460	128153519	(70142040)	+	G-rich	Low_complexity	1	61	(0)	2681288
14	4.0	3.3	6.5	chr3	128153493	128153522	(70142037)	+	(GGC)n	Simple_repeat	1	31	(0)	2681289
18	19.4	0.0	0.0	chr3	128153711	128153751	(70141808)	+	(GCCCGA)n	Simple_repeat	1	41	(0)	2681290
180	22.5	13.0	1.2	chr3	128413289	128413369	(69882190)	C	L2b	LINE/L2	(14)	3361	3270	2681692
13	16.6	0.0	0.0	chr3	128726204	128726230	(69569329)	+	(GGC)n	Simple_repeat	1	27	(0)	2682345
271	28.1	7.0	0.7	chr3	129001422	129001474	(69294085)	C	MamRep1879	DNA/hAT-Tip100?	(59)	157	1	2682847
296	24.5	2.1	0.0	chr3	129001475	129001568	(69293991)	+	MamRep488	DNA/hAT-Tip100	124	219	(0)	2682848
245	27.7	2.6	7.4	chr3	129026923	129027043	(69268516)	C	MLT1L	LTR/ERVL-MaLR	(81)	529	415	2682901
18	12.2	4.2	4.0	chr3	129249550	129249597	(69045962)	+	(AGAGCGC)n	Simple_repeat	1	50	(0)	2683412
246	22.4	4.8	1.2	chr3	129249826	129249915	(69045644)	C	MIR3	SINE/MIR	(133)	135	43	2683413
897	23.3	7.4	8.6	chr3	129440684	129441124	(68854435)	C	MER113	DNA/hAT-Charlie	(35)	486	52	2683754
21	3.4	0.0	3.1	chr3	129627539	129627570	(68667989)	+	(GGGA)n	Simple_repeat	1	32	(0)	2684108
8533	8.1	0.1	0.2	chr3	130832177	130833367	(67462192)	+	L1P1	LINE/L1	361	1550	(4605)	2686056
8001	18.3	4.0	7.4	chr3	132382692	132383815	(65911744)	C	MER52A	LTR/ERV1	(701)	1054	5	2688391
2387	13.6	3.7	4.8	chr3	133988021	133988639	(64306920)	+	MER4B	LTR/ERV1	1	766	(0)	2690769
3728	10.5	4.0	0.9	chr3	133988830	133989412	(64306147)	+	MER51C	LTR/ERV1	1	640	(0)	2690770
16152	15.4	4.4	6.0	chr3	134525398	134528344	(63767215)	C	L1PA8A	LINE/L1	(3865)	2898	4	2691582
5679	6.3	0.0	0.0	chr3	135439149	135439860	(62855699)	C	L1P1	LINE/L1	(5443)	712	1	2692861
11	22.5	2.2	4.3	chr3	136195597	136195642	(62099917)	+	(GGCGGC)n	Simple_repeat	1	47	(0)	2693943
15	24.4	2.2	2.2	chr3	137764076	137764120	(60531439)	+	(CT)n	Simple_repeat	1	46	(0)	2696489
23863	7.0	0.7	0.1	chr3	137896609	137902264	(60393295)	+	L1PA5	LINE/L1	1	5671	(483)	2696670
9696	15.0	3.8	3.6	chr3	138578807	138581002	(59714557)	+	L1M1	LINE/L1	16	2461	(5104)	2697740
14	20.0	0.0	6.5	chr3	138945502	138945547	(59350012)	+	(GGC)n	Simple_repeat	1	46	(0)	2698569
39	23.6	4.6	4.4	chr3	138945713	138945726	(59349833)	+	(GGC)n	Simple_repeat	1	18	(163)	2698570
13	15.8	2.7	2.6	chr3	138945727	138945763	(59349796)	+	G-rich	Low_complexity	1	38	(0)	2698571
39	23.6	4.6	4.4	chr3	138945764	138945885	(59349674)	+	(GGC)n	Simple_repeat	19	181	(0)	2698570
371	8.3	1.6	0.0	chr3	138946872	138946931	(59348628)	C	HERVIP10FH-int	LTR/ERV1	(4333)	769	709	2698573
348	30.2	4.3	3.2	chr3	139677197	139677381	(58618178)	+	L2a	LINE/L2	3228	3414	(12)	2699695
475	29.6	9.5	0.0	chr3	141081694	141081865	(57213694)	+	MIRc	SINE/MIR	73	262	(6)	2701746
14	19.9	4.2	2.0	chr3	141738676	141738723	(56556836)	+	(GCTGCG)n	Simple_repeat	1	50	(0)	2702771
13	22.3	0.0	8.2	chr3	143119664	143119724	(55175835)	+	G-rich	Low_complexity	1	61	(0)	2705218
27200	3.4	0.2	0.0	chr3	145252618	145258622	(53036937)	C	L1PA3	LINE/L1	(0)	6155	138	2708101
185	26.2	9.7	3.7	chr3	149752626	149752732	(48542827)	C	L2a	LINE/L2	(6)	3420	3307	2714160
14	27.2	1.6	3.2	chr3	150408713	150408773	(47886786)	+	(CCGC)n	Simple_repeat	1	62	(0)	2715187
75	8.3	0.0	0.0	chr3	150703722	150703823	(47591736)	+	(CTC)n	Simple_repeat	1	102	(0)	2715698
12	19.4	4.7	2.2	chr3	152268641	152268683	(46026876)	+	(CGGCTC)n	Simple_repeat	1	45	(0)	2717973
28163	1.6	0.1	0.0	chr3	155119417	155125444	(43170115)	C	L1PA2	LINE/L1	(0)	6155	124	2722073
1034	5.0	0.8	0.0	chr3	155855154	155855274	(42440285)	+	AluSp	SINE/Alu	1	122	(191)	2723151
2230	7.2	0.7	0.0	chr3	155855346	155855622	(42439937)	C	AluSx3	SINE/Alu	(16)	295	17	2723152
2344	8.5	0.0	0.3	chr3	155855628	155855922	(42439637)	+	AluSc	SINE/Alu	1	294	(15)	2723153
14	28.2	0.0	4.6	chr3	155870798	155870862	(42424697)	+	(CCGTC)n	Simple_repeat	1	65	(0)	2723195
12	17.5	3.1	0.0	chr3	155870839	155870870	(42424689)	+	(CCGGCC)n	Simple_repeat	1	33	(0)	2723196
15	26.4	0.0	0.0	chr3	158098206	158098250	(40197309)	+	G-rich	Low_complexity	1	45	(0)	2726357
21696	9.9	2.4	1.0	chr3	158936644	158942585	(39352974)	+	L1PB1	LINE/L1	772	6863	(4)	2727516
22132	11.7	1.8	3.3	chr3	158985604	158992030	(39303529)	C	L1PA7	LINE/L1	(7)	6462	5	2727591
31	8.3	0.0	3.6	chr3	159763931	159763985	(38531574)	+	(GGGCG)n	Simple_repeat	1	55	(0)	2728699
12411	15.3	1.7	2.5	chr3	160885420	160887573	(37407986)	+	L1PA7	LINE/L1	3	2151	(4332)	2730519
240	33.6	5.2	0.9	chr3	161373275	161373385	(36922174)	C	MIRc	SINE/MIR	(53)	215	100	2731249
27747	2.1	0.1	0.0	chr3	162405867	162411893	(35883666)	C	L1PA2	LINE/L1	(2)	6153	124	2732579
1997	9.3	9.0	10.6	chr3	162598531	162598946	(35696613)	+	LTR14B	LTR/ERVK	1	608	(0)	2732796
26301	2.7	0.1	0.0	chr3	168011033	168017055	(30278504)	+	L1PA2	LINE/L1	126	6155	(0)	2739482
37	0.0	0.0	0.0	chr3	168096250	168096281	(30199278)	+	(GT)n	Simple_repeat	1	32	(0)	2739595
19	7.4	0.0	0.0	chr3	169966949	169966977	(28328582)	+	(GGGTG)n	Simple_repeat	1	29	(0)	2742120
18	17.9	1.5	7.5	chr3	172448559	172448624	(25846935)	+	GA-rich	Low_complexity	1	67	(0)	2746086
19642	10.0	2.2	0.9	chr3	176323954	176326910	(21968649)	C	HERVH-int	LTR/ERV1	(4718)	2995	1	2751527
3360	7.2	0.0	0.7	chr3	176326913	176327363	(21968196)	C	LTR7	LTR/ERV1	(2)	448	1	2751527
31	23.0	3.8	4.3	chr3	177197564	177197618	(21097941)	+	(GCG)n	Simple_repeat	1	52	(0)	2752766
28	5.8	0.0	0.0	chr3	177197619	177197654	(21097905)	+	(CGGG)n	Simple_repeat	1	36	(0)	2752767
31	23.0	3.8	4.3	chr3	177197655	177197731	(21097828)	+	(GCG)n	Simple_repeat	2	80	(0)	2752768
2556	13.2	1.9	6.4	chr3	177281362	177281776	(21013783)	C	MSTB1	LTR/ERVL-MaLR	(26)	406	1	2752973
1921	13.8	2.0	0.0	chr3	177521197	177521485	(20774074)	C	MER1B	DNA/hAT-Charlie	(0)	339	45	2753397
12	20.6	6.5	4.5	chr3	178085024	178085085	(20210474)	+	GA-rich	Low_complexity	1	66	(0)	2754203
27739	2.4	0.0	0.0	chr3	178859949	178865979	(19429580)	+	L1PA2	LINE/L1	124	6155	(0)	2755285
15	18.1	5.8	1.8	chr3	179322883	179322934	(18972625)	+	(GGCCGCG)n	Simple_repeat	1	55	(0)	2755995
21	12.2	2.0	4.0	chr3	180912587	180912635	(17382924)	+	(CCCCTCC)n	Simple_repeat	1	50	(0)	2758546
16	0.0	0.0	0.0	chr3	181722128	181722144	(16573415)	+	(T)n	Simple_repeat	1	17	(0)	2759759
15	0.0	0.0	0.0	chr3	181722173	181722189	(16573370)	+	(TG)n	Simple_repeat	1	17	(0)	2759760
13	25.1	2.0	2.0	chr3	183884546	183884594	(14410965)	+	GA-rich	Low_complexity	1	50	(0)	2763582
13	25.9	3.2	3.1	chr3	183884783	183884845	(14410714)	+	(CCACG)n	Simple_repeat	1	65	(0)	2763583
193	33.1	4.4	4.4	chr3	184133940	184134075	(14161484)	C	L3b	LINE/CR1	(242)	4990	4855	2764087
300	34.7	6.6	2.4	chr3	184249013	184249208	(14046351)	+	L2c	LINE/L2	3147	3360	(27)	2764293
16	26.2	4.1	2.6	chr3	184659073	184659145	(13636414)	+	GA-rich	Low_complexity	1	76	(0)	2765077
49	0.0	0.0	0.0	chr3	184659147	184659188	(13636371)	+	(GT)n	Simple_repeat	1	42	(0)	2765078
18	16.7	7.9	5.2	chr3	185498746	185498834	(12796725)	+	(GATCCCG)n	Simple_repeat	1	96	(0)	2766483
14	13.2	2.9	2.8	chr3	185813877	185813911	(12481648)	+	GA-rich	Low_complexity	1	36	(0)	2767141
2043	13.2	2.6	0.0	chr3	186153823	186154124	(12141435)	+	AluJb	SINE/Alu	1	310	(2)	2767814
28321	1.8	0.0	0.0	chr3	187412124	187418152	(10877407)	+	L1PA2	LINE/L1	125	6154	(1)	2770116
26483	2.4	0.0	0.1	chr3	187862481	187868516	(10427043)	+	L1PA2	LINE/L1	124	6155	(0)	2770863
17	26.7	0.0	4.4	chr3	188947990	188948057	(9347502)	+	(CCGCC)n	Simple_repeat	1	68	(0)	2772772
26553	10.2	1.4	2.3	chr3	189017230	189025537	(9270022)	C	L1PA3	LINE/L1	(0)	8150	11	2772877
6640	5.0	0.9	1.5	chr3	190964648	190965526	(7330033)	C	L1HS	LINE/L1	(5140)	892	19	2775895
512	33.6	5.7	3.1	chr3	193812573	193812796	(4482763)	+	MIRb	SINE/MIR	10	239	(29)	2780043
953	26.1	14.8	3.9	chr3	193815102	193815484	(4480075)	C	MER115	DNA/hAT-Tip100	(1)	692	261	2780047
627	32.9	6.9	0.4	chr3	193815577	193815808	(4479751)	C	MER115	DNA/hAT-Tip100	(391)	302	55	2780048
215	34.7	7.5	2.4	chr3	194054540	194054793	(4240766)	C	L2b	LINE/L2	(94)	3281	3014	2780447
20	14.6	0.0	0.0	chr3	194058251	194058288	(4237271)	+	(CCAGCC)n	Simple_repeat	1	38	(0)	2780457
16	26.1	4.7	0.0	chr3	194058533	194058596	(4236963)	+	GA-rich	Low_complexity	1	67	(0)	2780458
184	36.5	0.0	0.0	chr3	194070556	194070629	(4224930)	+	MIR3	SINE/MIR	50	123	(85)	2780481
406	21.1	8.4	5.6	chr3	194140531	194140699	(4154860)	+	MIR3	SINE/MIR	18	185	(23)	2780608
807	20.6	5.2	2.0	chr3	194326487	194328036	(3967523)	+	(CA)n	Simple_repeat	1	1630	(0)	2780940
610	28.2	13.2	1.8	chr3	194333041	194333440	(3962119)	C	MER20B	DNA/hAT-Charlie	(10)	773	321	2780947
244	25.0	8.0	5.2	chr3	195910030	195910126	(2385433)	+	MIR3	SINE/MIR	82	181	(27)	2783822
14	0.0	0.0	0.0	chr3	196432404	196432421	(1863138)	+	(CCG)n	Simple_repeat	1	18	(0)	2784995
261	30.4	4.2	5.0	chr3	197021226	197021346	(1274213)	C	MIRb	SINE/MIR	(121)	147	28	2786233
206	32.7	10.2	0.7	chr3	197021571	197021721	(1273838)	+	MIR	SINE/MIR	22	188	(74)	2786234
3329	8.7	5.1	0.2	chr3	197574314	197574762	(720797)	C	MER4A1	LTR/ERV1	(0)	472	1	2787145
651	23.5	4.8	2.2	chr3	197960679	197960861	(334698)	C	MER5A	DNA/hAT-Charlie	(1)	188	1	2787895
500	33.2	4.0	3.7	chr4	173470	173766	(190040789)	+	MER52-int	LTR/ERV1	4976	5273	(1818)	2788730
2534	16.1	6.2	2.9	chr4	173778	174262	(190040293)	C	LTR22E	LTR/ERVK	(0)	507	6	2788731
4737	20.8	5.4	2.4	chr4	214370	215895	(189998660)	+	LTR70	LTR/ERV1	1	1271	(15)	2788779
2460	6.6	0.0	0.3	chr4	498722	499023	(189715532)	C	AluSc	SINE/Alu	(8)	301	1	2789188
12	20.2	0.0	6.7	chr4	577434	577478	(189637077)	+	(GGTG)n	Simple_repeat	1	45	(0)	2789274
13	26.1	0.0	0.0	chr4	2536551	2536591	(187677964)	+	G-rich	Low_complexity	1	41	(0)	2791757
12	21.1	0.0	2.9	chr4	2536598	2536632	(187677923)	+	(CCCCT)n	Simple_repeat	1	35	(0)	2791758
24	25.1	4.9	1.9	chr4	2792973	2793074	(187421481)	+	G-rich	Low_complexity	1	107	(0)	2792250
13022	9.1	0.6	1.6	chr4	2921428	2923602	(187290953)	C	L1PA7	LINE/L1	(4310)	2189	1	2792449
13	12.7	0.0	0.0	chr4	2934848	2934873	(187279682)	+	(GCCAC)n	Simple_repeat	1	26	(0)	2792456
24179	8.0	0.8	0.6	chr4	3160921	3167073	(187047482)	C	L1PA7	LINE/L1	(0)	6154	5	2792870
15	7.8	0.0	6.5	chr4	3481100	3481130	(186733425)	+	(AGG)n	Simple_repeat	1	31	(0)	2793211
193	27.4	5.8	3.4	chr4	3791967	3792083	(186422472)	C	L2	LINE/L2	(870)	2549	2430	2793620
1617	17.5	5.1	2.5	chr4	3868047	3868444	(186346111)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	24	2793740
213	31.8	0.9	8.6	chr4	5875552	5875668	(184338887)	C	L2c	LINE/L2	(246)	3141	3034	2797342
2326	7.5	0.0	0.3	chr4	5875872	5876166	(184338389)	+	AluY	SINE/Alu	2	295	(16)	2797343
212	26.5	0.0	0.0	chr4	6105348	6105396	(184109159)	+	L2a	LINE/L2	3352	3400	(26)	2797748
830	27.6	0.4	6.9	chr4	6362797	6363041	(183851514)	+	MIR	SINE/MIR	2	230	(32)	2798226
463	24.9	4.2	8.1	chr4	6363199	6363296	(183851259)	C	MER63A	DNA/hAT-Blackjack	(0)	210	119	2798227
2496	8.0	0.0	0.3	chr4	6363297	6363608	(183850947)	+	AluY	SINE/Alu	1	311	(0)	2798228
1889	12.9	1.9	0.0	chr4	6640054	6640356	(183574199)	C	AluSz	SINE/Alu	(1)	311	3	2798791
2154	10.4	4.0	3.5	chr4	8532210	8532556	(181681999)	C	MER4D1	LTR/ERV1	(551)	349	1	2801897
473	26.4	2.7	5.3	chr4	8532561	8532748	(181681807)	+	MLT1J1	LTR/ERVL-MaLR	235	417	(27)	2801898
188	22.4	0.0	4.9	chr4	8891879	8891939	(181322616)	+	L2c	LINE/L2	3099	3156	(231)	2802428
9491	16.1	3.9	2.8	chr4	13444850	13446816	(176767739)	C	L1P3	LINE/L1	(4489)	1994	10	2809330
15	20.3	0.0	8.3	chr4	17781784	17781843	(172432712)	+	(GGACAG)n	Simple_repeat	1	60	(0)	2816919
530	28.2	0.0	4.5	chr4	18691630	18691807	(171522748)	+	Tigger19b	DNA/TcMar-Tigger	282	451	(99)	2818299
30	26.4	1.5	5.8	chr4	22516000	22516135	(167698420)	+	(CGC)n	Simple_repeat	1	138	(0)	2824079
58	1.9	0.0	0.0	chr4	24470272	24470325	(165744230)	+	(AC)n	Simple_repeat	1	54	(0)	2827178
31	3.1	0.0	0.0	chr4	24472664	24472696	(165741859)	+	(GCC)n	Simple_repeat	1	33	(0)	2827180
24	15.1	4.9	1.6	chr4	24472751	24472762	(165741793)	+	(GCGTGT)n	Simple_repeat	1	61	(0)	2827181
27	14.7	2.1	0.0	chr4	24472763	24472809	(165741746)	+	(TG)n	Simple_repeat	1	48	(0)	2827182
29	19.6	0.0	0.0	chr4	24472884	24472921	(165741634)	+	(GC)n	Simple_repeat	1	38	(0)	2827183
31	0.0	3.3	0.0	chr4	24472922	24472951	(165741604)	+	(GT)n	Simple_repeat	1	31	(0)	2827184
29	19.6	0.0	0.0	chr4	24472952	24472971	(165741584)	+	(GC)n	Simple_repeat	1	20	(0)	2827185
31	28.6	1.8	0.9	chr4	26319397	26319507	(163895048)	+	(CCCCCCG)n	Simple_repeat	1	113	(0)	2830848
28397	2.2	0.0	0.0	chr4	27070204	27076264	(163138291)	C	L1PA2	LINE/L1	(0)	6155	124	2832031
21	26.6	1.4	1.4	chr4	37453961	37454029	(152760526)	+	(CCG)n	Simple_repeat	1	70	(0)	2846127
35	7.0	0.0	0.0	chr4	37891044	37891089	(152323466)	+	(CCT)n	Simple_repeat	1	46	(0)	2846890
12	34.6	0.0	3.0	chr4	37891094	37891108	(152323447)	+	(GCT)n	Simple_repeat	1	35	(31)	2846891
14	19.4	0.0	5.0	chr4	37891109	37891148	(152323407)	+	(GCC)n	Simple_repeat	1	40	(0)	2846892
12	34.6	0.0	3.0	chr4	37891149	37891159	(152323396)	+	(GCT)n	Simple_repeat	36	66	(0)	2846891
19	28.1	2.5	2.4	chr4	39044713	39044793	(151169762)	+	(GGCGG)n	Simple_repeat	1	83	(0)	2848878
14	13.6	0.0	5.6	chr4	39698529	39698564	(150515991)	+	(TCCCC)n	Simple_repeat	1	36	(0)	2850245
25	11.8	0.0	0.0	chr4	41216414	41216450	(148998105)	+	(G)n	Simple_repeat	1	37	(0)	2853655
20	25.4	1.6	1.6	chr4	41216451	41216462	(148998093)	+	(GCG)n	Simple_repeat	32	64	(0)	2853654
665	23.1	15.7	6.1	chr4	42294294	42294620	(147919935)	+	LTR81A	LTR/Gypsy	1	364	(986)	2855416
241	30.8	3.0	11.2	chr4	42294752	42294930	(147919625)	+	MamGypLTR2c	LTR/Gypsy	305	468	(600)	2855417
15	9.7	0.0	0.0	chr4	42656757	42656778	(147557777)	+	(AC)n	Simple_repeat	1	22	(0)	2855919
21881	11.7	1.6	2.4	chr4	52377250	52383760	(137830795)	+	L1PA8A	LINE/L1	3	6446	(0)	2866104
12	22.4	0.0	2.6	chr4	52751641	52751678	(137462877)	+	G-rich	Low_complexity	1	38	(0)	2866702
16	16.8	0.0	0.0	chr4	55132844	55132870	(135081685)	+	(T)n	Simple_repeat	1	27	(0)	2870396
25	9.2	0.0	0.0	chr4	55133122	55133156	(135081399)	+	(A)n	Simple_repeat	1	35	(0)	2870397
7719	5.0	2.8	0.3	chr4	55280799	55281803	(134932752)	+	MER11C	LTR/ERVK	41	1071	(0)	2870613
13	13.1	0.0	0.0	chr4	55546669	55546694	(134667861)	+	(CCTTC)n	Simple_repeat	1	26	(0)	2871092
12	15.3	8.1	0.0	chr4	55546695	55546700	(134667855)	+	(CTCCCC)n	Simple_repeat	6	40	(0)	2871093
27092	3.6	0.1	0.1	chr4	55841738	55847894	(134366661)	+	L1PA3	LINE/L1	1	6154	(1)	2871563
41	30.5	3.5	3.4	chr4	56505866	56506094	(133708461)	+	A-rich	Low_complexity	1	237	(0)	2872718
18047	5.6	2.2	0.6	chr4	56884323	56885537	(133329018)	+	L1PA6	LINE/L1	177	1431	(4926)	2873551
25079	5.8	0.6	1.1	chr4	61754619	61760805	(128453750)	C	L1PA4	LINE/L1	(0)	6155	1	2879842
19940	9.5	3.1	0.8	chr4	61766614	61769540	(128445015)	C	HERVH-int	LTR/ERV1	(4718)	2995	1	2879846
3065	7.2	0.4	7.7	chr4	61769543	61770025	(128444530)	C	LTR7	LTR/ERV1	(2)	448	1	2879846
22710	8.8	0.8	0.5	chr4	63589608	63595756	(126618799)	+	L1PA6	LINE/L1	4	6154	(0)	2882174
3162	6.7	0.2	10.6	chr4	64737777	64738276	(125476279)	+	LTR7	LTR/ERV1	1	448	(2)	2883521
13	18.2	0.0	4.9	chr4	65670313	65670353	(124544202)	+	(GCTGAGG)n	Simple_repeat	1	41	(0)	2884662
27150	2.9	0.6	0.1	chr4	65993300	65999302	(124215253)	C	L1PA2	LINE/L1	(0)	6155	125	2885100
3824	14.4	2.6	0.0	chr4	66265859	66266462	(123948093)	+	L1PA8A	LINE/L1	88	707	(5168)	2885426
2223	13.3	0.3	0.0	chr4	68405499	68405807	(121808748)	C	AluSz	SINE/Alu	(2)	310	1	2888312
2370	11.5	6.7	5.6	chr4	68405808	68405893	(121808662)	+	MER4-int	LTR/ERV1	349	419	(6179)	2888311
2581	8.5	10.9	0.8	chr4	68405894	68406295	(121808260)	+	LTR7	LTR/ERV1	1	448	(2)	2888313
12	17.7	3.1	0.0	chr4	70902282	70902313	(119312242)	+	(CCTCC)n	Simple_repeat	1	33	(0)	2891446
1844	19.6	4.0	0.7	chr4	70994225	70994661	(119219894)	C	L1ME1	LINE/L1	(9)	6170	5719	2891631
12276	11.7	3.1	1.3	chr4	71856267	71857844	(118356711)	C	MER4B-int	LTR/ERV1	(0)	6758	5081	2892753
3240	9.4	0.6	5.7	chr4	71857845	71858351	(118356204)	+	LTR21A	LTR/ERV1	1	481	(0)	2892754
10072	11.9	4.9	0.4	chr4	72845983	72847627	(117366928)	+	L1P3	LINE/L1	5	1727	(4734)	2894009
27471	3.5	0.3	0.3	chr4	78301854	78307882	(111906673)	C	L1PA3	LINE/L1	(0)	6155	124	2901974
22326	7.6	0.3	0.3	chr4	78501722	78506887	(111707668)	C	L1PA6	LINE/L1	(993)	5153	2	2902230
15	5.5	0.0	0.0	chr4	78776041	78776059	(111438496)	+	(C)n	Simple_repeat	1	19	(0)	2902732
12	19.1	3.8	5.5	chr4	78776078	78776130	(111438425)	+	(GCGGCC)n	Simple_repeat	1	55	(0)	2902733
12	13.9	0.0	0.0	chr4	80072759	80072782	(110141773)	+	(CCG)n	Simple_repeat	1	24	(0)	2904351
27360	3.2	0.2	0.1	chr4	80687675	80693706	(109520849)	+	L1PA3	LINE/L1	124	6155	(0)	2905123
19	30.4	3.9	1.9	chr4	82900921	82901024	(107313531)	+	(GCGTG)n	Simple_repeat	1	108	(0)	2908437
1782	23.1	9.9	5.5	chr4	84870234	84870887	(105343668)	+	L1MCa	LINE/L1	5	690	(5355)	2911743
9960	9.3	0.9	0.1	chr4	85129233	85130579	(105083976)	C	L1P3	LINE/L1	(5102)	1359	2	2912146
27682	2.2	0.0	0.0	chr4	86070391	86076419	(104138136)	C	L1PA2	LINE/L1	(0)	6155	125	2913350
15	23.7	9.2	2.5	chr4	88007541	88007649	(102206906)	+	(GGCGGACG)n	Simple_repeat	1	119	(0)	2916370
15	12.0	7.9	2.4	chr4	88007678	88007715	(102206840)	+	(GC)n	Simple_repeat	1	41	(0)	2916371
27890	1.9	0.0	0.1	chr4	91786025	91792049	(98422506)	C	L1PA2	LINE/L1	(0)	6155	136	2921537
5174	21.5	4.4	2.9	chr4	92254187	92255466	(97959089)	C	L1P3b	LINE/L1	(5141)	1320	8	2922046
5001	12.5	3.8	0.0	chr4	92276389	92277195	(97937360)	C	HERVH-int	LTR/ERV1	(6874)	839	1	2922065
3376	7.2	0.0	0.7	chr4	92277198	92277648	(97936907)	C	LTR7	LTR/ERV1	(2)	448	1	2922065
20	3.7	0.0	0.0	chr4	92305517	92305544	(97909011)	+	(CGCCT)n	Simple_repeat	1	28	(0)	2922096
12526	17.9	3.5	0.2	chr4	92431650	92433806	(97780749)	C	L1MA3	LINE/L1	(5322)	2243	12	2922271
15	14.4	0.0	0.0	chr4	93828524	93828547	(96386008)	+	(A)n	Simple_repeat	1	24	(0)	2924142
17272	7.1	0.1	0.8	chr4	94144319	94148665	(96065890)	C	L1P2	LINE/L1	(1847)	4299	1	2924551
22	9.2	0.0	0.0	chr4	95549254	95549288	(94665267)	+	(GGGGGT)n	Simple_repeat	1	35	(0)	2926554
20	17.8	3.9	0.0	chr4	95549289	95549304	(94665251)	+	(GGAGGT)n	Simple_repeat	1	53	(0)	2926555
10306	11.0	0.7	0.2	chr4	97037092	97038554	(93176001)	C	L1PA7	LINE/L1	(4990)	1471	2	2928427
17113	4.6	0.7	0.3	chr4	97903599	97905807	(92308748)	+	L1PA3	LINE/L1	124	2339	(3807)	2929469
23214	8.2	0.9	0.5	chr4	100862789	100868930	(89345625)	C	L1PA6	LINE/L1	(0)	6154	7	2933605
1616	18.2	4.3	3.5	chr4	100913640	100913843	(89300712)	C	MER2	DNA/TcMar-Tigger	(0)	345	140	2933645
1845	14.0	9.4	0.0	chr4	100913844	100914150	(89300405)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	2933646
13	14.7	0.0	3.1	chr4	103019725	103019756	(87194799)	+	G-rich	Low_complexity	1	32	(0)	2936488
18	29.9	0.0	1.6	chr4	104494731	104494793	(85719762)	+	GA-rich	Low_complexity	1	63	(0)	2938271
34	4.0	7.7	0.0	chr4	104494918	104494969	(85719586)	+	(TC)n	Simple_repeat	1	56	(0)	2938272
13	13.0	0.0	7.7	chr4	104495055	104495093	(85719462)	+	G-rich	Low_complexity	1	39	(0)	2938273
14	5.0	0.0	0.0	chr4	104591802	104591822	(85622733)	+	(CAG)n	Simple_repeat	1	21	(0)	2938401
11	16.4	5.9	0.0	chr4	109560059	109560092	(80654463)	+	(GCTCTC)n	Simple_repeat	1	36	(0)	2945187
16	0.0	0.0	0.0	chr4	109560093	109560110	(80654445)	+	(T)n	Simple_repeat	1	18	(0)	2945188
18	20.1	0.0	5.3	chr4	109703447	109703455	(80511100)	+	(GGCCCC)n	Simple_repeat	1	27	(30)	2945395
12	18.1	2.4	4.8	chr4	109703456	109703496	(80511059)	+	(GCCCC)n	Simple_repeat	1	42	(0)	2945396
18	20.1	0.0	5.3	chr4	109703497	109703503	(80511052)	+	(GGCCCC)n	Simple_repeat	28	57	(0)	2945395
27661	2.8	0.2	0.0	chr4	110870810	110876821	(79337734)	C	L1PA2	LINE/L1	(7)	6148	124	2947190
27576	2.8	0.4	0.0	chr4	111336944	111342946	(78871609)	+	L1PA2	LINE/L1	125	6153	(2)	2947728
24913	5.7	0.2	0.0	chr4	112303776	112309596	(77904959)	C	L1PA5	LINE/L1	(26)	6128	297	2949004
685	5.8	0.0	0.0	chr4	112309582	112309667	(77904888)	C	L1PA5	LINE/L1	(6057)	98	13	2949004
21044	9.6	2.5	0.8	chr4	112361274	112367204	(77847351)	+	L1PB1	LINE/L1	834	6864	(3)	2949068
1041	21.9	3.0	6.8	chr4	112645505	112645815	(77568740)	C	AluJb	SINE/Alu	(11)	301	3	2949528
1841	10.3	9.7	0.0	chr4	112645996	112646266	(77568289)	C	AluSx3	SINE/Alu	(8)	303	4	2949529
13	6.5	5.6	5.3	chr4	112751608	112751643	(77462912)	+	G-rich	Low_complexity	1	38	(0)	2949791
897	28.2	12.2	3.9	chr4	113646267	113646835	(76567720)	C	L2a	LINE/L2	(1)	3425	2814	2951085
12	21.7	0.0	0.0	chr4	114598686	114598717	(75615838)	+	G-rich	Low_complexity	1	32	(0)	2952251
23862	2.9	0.3	0.0	chr4	116775044	116781055	(73433500)	C	L1PA3	LINE/L1	(0)	6155	129	2954870
1885	11.3	0.0	0.0	chr4	118278166	118278404	(71936151)	C	AluSz	SINE/Alu	(73)	239	1	2956658
238	31.6	0.0	2.6	chr4	118669435	118669512	(71545043)	+	MamRep605	LTR?	108	183	(666)	2957330
803	34.5	2.9	2.7	chr4	118669565	118669972	(71544583)	+	MamRep605	LTR?	341	749	(100)	2957330
228	35.2	4.5	7.5	chr4	118850085	118850339	(71364216)	C	L2c	LINE/L2	(230)	3157	2911	2957598
28070	1.7	0.0	0.2	chr4	119274114	119280127	(70934428)	C	L1PA2	LINE/L1	(16)	6139	124	2958204
6661	18.8	5.8	1.5	chr4	120003749	120005302	(70209253)	+	L1M3f	LINE/L1	1239	2861	(4704)	2959247
27635	2.9	0.0	0.0	chr4	120741414	120747472	(69467083)	+	L1PA3	LINE/L1	124	6155	(0)	2960174
26316	2.6	0.1	0.0	chr4	122110093	122116118	(68098437)	+	L1PA3	LINE/L1	124	6155	(0)	2962090
404	15.6	4.2	3.2	chr4	123304532	123304624	(66909931)	C	UCON68	Unknown	(34)	98	5	2963758
19	17.5	0.0	0.0	chr4	123397833	123397865	(66816690)	+	A-rich	Low_complexity	1	33	(0)	2963909
29	0.0	0.0	0.0	chr4	124712784	124712810	(65501745)	+	(CCCCGC)n	Simple_repeat	1	27	(0)	2965645
13	22.6	0.0	0.0	chr4	125317228	125317263	(64897292)	+	(GCGGAC)n	Simple_repeat	1	36	(0)	2966467
27702	2.4	0.1	0.1	chr4	127650221	127656245	(62558310)	C	L1PA2	LINE/L1	(0)	6155	128	2969365
501	31.5	7.0	1.4	chr4	132494834	132495290	(57719265)	C	L1ME4b	LINE/L1	(245)	647	255	2975907
2503	6.7	13.8	0.5	chr4	132495300	132495687	(57718868)	+	LTR7	LTR/ERV1	1	448	(2)	2975908
14	24.4	3.6	1.8	chr4	140150977	140151031	(50063524)	+	G-rich	Low_complexity	1	57	(0)	2985796
32	19.4	2.5	1.2	chr4	140151163	140151241	(50063314)	+	GA-rich	Low_complexity	1	81	(0)	2985797
12	13.7	6.2	0.0	chr4	140154048	140154079	(50060476)	+	(CGCTGC)n	Simple_repeat	1	34	(0)	2985803
16	0.0	0.0	0.0	chr4	140154108	140154127	(50060428)	+	(CGC)n	Simple_repeat	1	20	(0)	2985804
34	2.4	2.3	2.2	chr4	140154128	140154171	(50060384)	+	(CCT)n	Simple_repeat	1	45	(0)	2985805
18	15.0	2.1	4.1	chr4	140154307	140154354	(50060201)	+	(CGCCCGG)n	Simple_repeat	1	49	(0)	2985806
10218	15.9	2.5	1.9	chr4	142435483	142437671	(47776884)	+	L1PA10	LINE/L1	1	2214	(4269)	2988939
17	20.7	3.3	3.2	chr4	143184775	143184834	(47029721)	+	G-rich	Low_complexity	1	62	(0)	2989909
35	2.8	0.0	0.0	chr4	143184837	143184873	(47029682)	+	(GGCGGAGG)n	Simple_repeat	1	37	(0)	2989910
18	21.7	2.6	6.2	chr4	145733135	145733212	(44481343)	+	(GCCC)n	Simple_repeat	1	80	(0)	2993328
17	28.2	5.5	1.0	chr4	145936942	145937032	(44277523)	+	(CCCTCTC)n	Simple_repeat	1	96	(0)	2993605
41	8.7	1.6	0.0	chr4	145938875	145938935	(44275620)	+	(CT)n	Simple_repeat	1	62	(0)	2993609
29	21.2	1.2	4.8	chr4	145938938	145939020	(44275535)	+	(CA)n	Simple_repeat	1	84	(0)	2993610
15	0.0	4.0	3.9	chr4	146639953	146639977	(43574578)	+	(CCA)n	Simple_repeat	1	26	(0)	2994604
36	2.7	0.0	0.0	chr4	146640089	146640126	(43574429)	+	(CAC)n	Simple_repeat	1	38	(0)	2994605
27437	2.7	0.1	0.0	chr4	148317875	148323904	(41890651)	C	L1PA2	LINE/L1	(0)	6155	125	2996975
27647	2.6	0.0	0.0	chr4	149915525	149921557	(40292998)	+	L1PA3	LINE/L1	124	6155	(0)	2998998
13	11.1	0.0	6.1	chr4	152936129	152936161	(37278394)	+	(GGTGGC)n	Simple_repeat	1	33	(0)	3003771
14	12.2	0.0	0.0	chr4	152936269	152936295	(37278260)	+	(CCGCC)n	Simple_repeat	1	27	(0)	3003772
293	31.9	2.1	3.1	chr4	153790119	153790215	(36424340)	C	L2b	LINE/L2	(29)	3346	3251	3005189
26	22.4	1.3	2.6	chr4	154491788	154491863	(35722692)	+	G-rich	Low_complexity	1	77	(0)	3006119
13	25.2	0.0	2.3	chr4	154491937	154491980	(35722575)	+	(CGCCTC)n	Simple_repeat	1	44	(0)	3006120
27369	2.5	0.1	0.3	chr4	156284541	156290599	(33923956)	C	L1PA2	LINE/L1	(0)	6155	139	3008607
22720	13.2	1.7	1.2	chr4	156505321	156509554	(33705001)	+	L1PA8A	LINE/L1	1	4276	(2185)	3008887
21864	10.4	2.0	3.6	chr4	158901287	158903433	(31311122)	C	L1PA7	LINE/L1	(0)	2166	8	3012067
27249	3.4	0.3	0.1	chr4	160120218	160126215	(30088340)	C	L1PA3	LINE/L1	(3)	6152	145	3013749
27372	2.3	0.1	0.1	chr4	160574033	160580085	(29634470)	+	L1PA2	LINE/L1	126	6155	(0)	3014250
11	12.4	0.0	11.4	chr4	166501899	166501942	(23712613)	+	A-rich	Low_complexity	1	44	(0)	3022459
4488	21.1	3.8	1.9	chr4	166502018	166503223	(23711332)	C	L1PA17	LINE/L1	(5558)	1315	2	3022460
13	20.2	2.0	5.8	chr4	168832071	168832121	(21382434)	+	(CCCGCT)n	Simple_repeat	1	52	(0)	3025411
25731	4.0	0.6	0.1	chr4	173603063	173609186	(16605369)	C	L1PA4	LINE/L1	(1)	6154	7	3031857
2799	22.3	11.3	6.4	chr4	180701418	180702340	(9512215)	C	LTR28B	LTR/ERV1	(0)	974	1	3041123
998	26.6	11.3	4.3	chr4	181949410	181949981	(8264574)	+	L2a	LINE/L2	2545	3189	(237)	3042758
3054	8.3	2.9	0.7	chr4	181949982	181950417	(8264138)	+	LTR7	LTR/ERV1	3	448	(2)	3042759
13	13.7	2.9	2.9	chr4	182144167	182144200	(8070355)	+	(CTCCT)n	Simple_repeat	1	35	(0)	3043028
29	0.0	0.0	0.0	chr4	182144203	182144227	(8070328)	+	(CA)n	Simple_repeat	1	25	(0)	3043029
14	16.3	4.7	2.2	chr4	182144437	182144479	(8070076)	+	(GGAGGCG)n	Simple_repeat	1	45	(0)	3043030
1048	10.1	0.0	4.8	chr4	183183182	183183348	(7031207)	C	L1PA10	LINE/L1	(9)	6159	6001	3044542
509	29.6	0.8	4.0	chr4	183183350	183183500	(7031055)	C	L1ME4c	LINE/L1	(465)	365	219	3044543
1633	17.9	2.9	3.3	chr4	183183501	183183807	(7030748)	+	AluJb	SINE/Alu	2	307	(5)	3044544
17	22.4	0.0	0.0	chr4	184390083	184390124	(5824431)	+	(TCTC)n	Simple_repeat	1	42	(0)	3046479
31	17.6	2.5	2.4	chr4	184474579	184474658	(5739897)	+	(CCCTCCG)n	Simple_repeat	1	82	(0)	3046627
13419	12.0	0.4	3.9	chr4	186244428	186247216	(3967339)	C	HERVH-int	LTR/ERV1	(4718)	2995	1	3049387
1079	24.4	9.2	1.2	chr4	189186022	189186423	(1028132)	+	LTR56	LTR/ERV1	9	445	(0)	3053567
21	28.2	1.0	5.0	chr5	53534	53639	(181484620)	+	G-rich	Low_complexity	1	101	(0)	3055017
17	29.7	0.0	2.9	chr5	53889	53957	(181484302)	+	G-rich	Low_complexity	1	69	(0)	3055018
15	23.4	2.8	5.4	chr5	1004937	1005008	(180533251)	+	G-rich	Low_complexity	1	74	(0)	3055893
272	17.5	1.7	0.0	chr5	1316513	1316569	(180221690)	+	MER88	LTR/ERVL	4	61	(403)	3056136
236	20.0	1.4	2.8	chr5	1316592	1316663	(180221596)	+	MER88	LTR/ERVL	148	218	(246)	3056136
1342	14.2	4.6	11.4	chr5	1634211	1634535	(179903724)	+	AluJb	SINE/Alu	1	302	(10)	3056475
937	28.5	5.4	0.3	chr5	1659751	1660081	(179878178)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	26	3056504
12	30.9	1.5	2.9	chr5	3600713	3600779	(177937480)	+	G-rich	Low_complexity	1	68	(0)	3058497
184	21.5	11.0	1.5	chr5	6328102	6328167	(175210092)	C	L2c	LINE/L2	(0)	3387	3315	3061685
334	31.4	7.5	0.0	chr5	6328399	6328522	(175209737)	+	LTR16E1	LTR/ERVL	167	300	(238)	3061686
309	24.7	11.0	0.0	chr5	6328515	6328603	(175209656)	+	LTR16E1	LTR/ERVL	435	534	(4)	3061686
14267	8.8	3.5	2.4	chr5	6646414	6649889	(174888370)	C	L1P2	LINE/L1	(2634)	3512	8	3062130
26015	3.7	0.2	0.2	chr5	7170549	7176731	(174361528)	+	L1PA3	LINE/L1	2	6155	(0)	3062796
211	27.2	21.4	2.3	chr5	7419852	7420024	(174118235)	C	MIR	SINE/MIR	(33)	229	15	3063132
689	20.1	11.7	3.6	chr5	7420033	7420228	(174118031)	+	MER20	DNA/hAT-Charlie	3	216	(3)	3063133
23997	7.8	1.1	0.4	chr5	10011065	10017180	(171521079)	C	L1PA6	LINE/L1	(13)	6141	4	3066215
763	22.2	7.5	0.0	chr5	10267291	10267475	(171270784)	+	Charlie1a	DNA/hAT-Charlie	5	204	(1251)	3066580
1684	16.5	2.8	0.7	chr5	10267502	10267786	(171270473)	+	AluJo	SINE/Alu	1	291	(21)	3066581
706	17.1	6.7	1.4	chr5	10267788	10267929	(171270330)	+	Charlie1a	DNA/hAT-Charlie	739	888	(567)	3066582
6180	5.8	0.5	0.3	chr5	12660382	12661159	(168877100)	C	LTR17	LTR/ERV1	(0)	780	1	3069839
3482	15.6	3.6	3.5	chr5	12661339	12661734	(168876525)	C	LTR9C	LTR/ERV1	(0)	666	285	3069840
7596	13.4	16.0	0.1	chr5	12661735	12663059	(168875200)	+	LTR12C	LTR/ERV1	3	1577	(2)	3069841
1306	21.2	1.3	2.3	chr5	12667869	12667881	(168870378)	+	L1MC	LINE/L1	5098	5108	(1038)	3069843
3355	4.9	0.7	0.9	chr5	12667882	12668330	(168869929)	C	LTR7	LTR/ERV1	(2)	448	1	3069844
1306	21.3	1.3	2.1	chr5	12668331	12668646	(168869613)	+	L1MC	LINE/L1	5109	5426	(907)	3069843
412	26.4	12.6	2.4	chr5	14728151	14728363	(166809896)	C	MIRb	SINE/MIR	(25)	243	6	3072584
23	20.4	4.3	1.4	chr5	16179074	16179142	(165359117)	+	(GCT)n	Simple_repeat	1	72	(0)	3074628
22126	12.3	2.0	1.7	chr5	18118984	18125450	(163412809)	+	L1PA8A	LINE/L1	1706	8097	(29)	3077681
27256	3.5	0.5	0.1	chr5	30423378	30429507	(151108752)	C	L1PA3	LINE/L1	(1)	6154	3	3093620
12	5.5	0.0	0.0	chr5	32174289	32174307	(149363952)	+	(GGC)n	Simple_repeat	1	19	(0)	3096324
323	29.5	10.9	4.9	chr5	33441308	33441471	(148096788)	C	MIR3	SINE/MIR	(0)	208	34	3098353
14	16.1	0.0	0.0	chr5	35229763	35229790	(146308469)	+	(GCT)n	Simple_repeat	1	28	(0)	3101108
11	24.2	5.5	1.7	chr5	35230073	35230127	(146308132)	+	(GGCTGCC)n	Simple_repeat	1	58	(0)	3101109
1502	16.6	10.8	0.4	chr5	36619359	36619623	(144918636)	+	AluJr4	SINE/Alu	2	297	(15)	3103097
27	19.1	4.7	5.4	chr5	37371280	37371385	(144166874)	+	G-rich	Low_complexity	1	111	(0)	3104376
1572	18.7	4.8	12.0	chr5	39021390	39021815	(142516444)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	3106964
189	28.3	4.8	0.0	chr5	40756193	40756252	(140782007)	C	L2c	LINE/L2	(52)	3335	3273	3109365
13	20.5	5.8	1.8	chr5	40797717	40797768	(140740491)	+	(CGCCCGC)n	Simple_repeat	1	55	(0)	3109433
17109	6.3	1.0	0.1	chr5	40895384	40898205	(140640054)	+	L1P2	LINE/L1	9	2842	(3304)	3109644
2143	15.1	18.2	0.2	chr5	43007613	43008023	(138530236)	+	MER61D	LTR/ERV1	1	501	(0)	3112396
2106	10.1	1.7	0.0	chr5	43008369	43008655	(138529604)	C	AluSz	SINE/Alu	(20)	292	1	3112397
2271	9.2	0.3	0.0	chr5	43120440	43120734	(138417525)	C	AluSx1	SINE/Alu	(16)	296	1	3112575
22203	10.4	1.2	1.8	chr5	45847500	45854000	(135684259)	+	L1PA7	LINE/L1	1	6449	(20)	3116061
27681	2.7	0.1	0.0	chr5	51250747	51256770	(130281489)	+	L1PA2	LINE/L1	127	6155	(0)	3117526
13	24.7	2.9	5.6	chr5	51378574	51378642	(130159617)	+	(CTC)n	Simple_repeat	1	71	(0)	3117657
22006	12.0	1.4	1.4	chr5	52676710	52683071	(128855188)	C	L1PA8A	LINE/L1	(28)	6418	57	3119272
14	17.9	5.1	0.0	chr5	55307834	55307872	(126230387)	+	A-rich	Low_complexity	1	41	(0)	3123044
13	8.7	0.0	14.0	chr5	56909853	56909902	(124628357)	+	G-rich	Low_complexity	1	50	(0)	3125753
11502	4.8	0.0	0.3	chr5	57869386	57870876	(123667383)	C	L1PA3	LINE/L1	(4533)	1622	136	3127355
15	14.4	3.1	0.0	chr5	59893925	59893956	(121644303)	+	(TCCT)n	Simple_repeat	1	33	(0)	3130140
11	24.9	0.0	0.0	chr5	59893997	59894030	(121644229)	+	(GCAGCA)n	Simple_repeat	1	34	(0)	3130141
19731	14.6	2.3	0.8	chr5	59921778	59924894	(121613365)	+	L1M1	LINE/L1	15	3180	(4385)	3130193
27476	3.2	0.3	0.0	chr5	65370263	65376273	(116161986)	+	L1PA3	LINE/L1	125	6154	(1)	3137726
20	20.9	5.3	2.5	chr5	65925814	65925888	(115612371)	+	(CCCT)n	Simple_repeat	1	79	(0)	3138688
13	17.0	3.0	0.0	chr5	66144345	66144377	(115393882)	+	G-rich	Low_complexity	1	34	(0)	3139018
17	18.3	0.0	0.0	chr5	66144385	66144421	(115393838)	+	(CGGCTT)n	Simple_repeat	1	37	(0)	3139019
13	30.8	0.0	3.2	chr5	66144565	66144627	(115393632)	+	G-rich	Low_complexity	1	63	(0)	3139020
19	3.6	3.5	0.0	chr5	67166217	67166245	(114372014)	+	(CAGA)n	Simple_repeat	1	30	(0)	3140435
5347	4.1	0.7	0.0	chr5	67778913	67780009	(113758250)	+	L1P1	LINE/L1	4681	5781	(374)	3141242
25413	4.1	0.3	0.3	chr5	67780008	67786186	(113752073)	+	L1PA3	LINE/L1	1	6155	(0)	3141244
26261	2.5	0.1	0.0	chr5	67889605	67895628	(113642631)	+	L1PA2	LINE/L1	124	6155	(0)	3141368
15	12.4	2.6	5.0	chr5	71455695	71455733	(110082526)	+	(GCG)n	Simple_repeat	1	40	(0)	3147474
13	24.0	2.2	2.1	chr5	72848148	72848193	(108690066)	+	(CGG)n	Simple_repeat	1	47	(0)	3149599
551	26.1	5.6	0.5	chr5	74395177	74395361	(107142898)	C	LTR86B1	LTR/ERVL	(17)	476	282	3151907
764	18.4	7.3	0.0	chr5	74395389	74395540	(107142719)	C	LTR86B1	LTR/ERVL	(329)	164	1	3151907
14	17.6	0.0	0.0	chr5	74685356	74685387	(106852872)	+	(GGTGGC)n	Simple_repeat	1	32	(0)	3152360
27433	2.9	0.2	0.2	chr5	75695699	75701728	(105836531)	+	L1PA3	LINE/L1	124	6150	(5)	3153942
473	19.3	10.7	0.9	chr5	77087760	77087869	(104450390)	C	MER63B	DNA/hAT-Blackjack	(3)	433	312	3156161
269	21.3	0.0	0.0	chr5	77087871	77087917	(104450342)	C	MER63B	DNA/hAT-Blackjack	(352)	84	38	3156161
4189	14.4	8.5	9.7	chr5	77088061	77088691	(104449568)	C	LTR1B	LTR/ERV1	(0)	824	221	3156162
15	19.9	5.4	3.4	chr5	78648612	78648667	(102889592)	+	GA-rich	Low_complexity	1	59	(0)	3158377
13	18.6	4.3	4.1	chr5	78648763	78648809	(102889450)	+	GA-rich	Low_complexity	1	49	(0)	3158378
20	15.9	5.1	6.0	chr5	79514225	79514303	(102023956)	+	(GCCGCGG)n	Simple_repeat	1	83	(0)	3159873
30	11.2	0.0	6.2	chr5	80256092	80256156	(101282103)	+	(GCCCC)n	Simple_repeat	1	65	(0)	3161177
41	13.8	3.2	3.1	chr5	81751267	81751359	(99786900)	+	(CCTC)n	Simple_repeat	1	96	(0)	3163565
247	27.8	6.6	6.2	chr5	82274935	82275133	(99263126)	C	L2b	LINE/L2	(366)	3053	2853	3164380
28555	2.3	0.1	0.0	chr5	82429401	82435423	(99102836)	C	L1PA2	LINE/L1	(0)	6155	124	3164632
26385	2.6	1.9	0.1	chr5	82866881	82872788	(98665471)	C	L1PA3	LINE/L1	(2)	6153	124	3165233
20	32.6	3.2	1.0	chr5	83473435	83473527	(98064732)	+	(TC)n	Simple_repeat	1	96	(0)	3166014
12	4.7	4.5	0.0	chr5	83473608	83473629	(98064630)	+	(AGGG)n	Simple_repeat	1	23	(0)	3166015
43	0.0	0.0	0.0	chr5	88397614	88397650	(93140609)	+	(CA)n	Simple_repeat	1	37	(0)	3172269
13	21.9	2.3	2.2	chr5	88397657	88397700	(93140559)	+	(CCTCCC)n	Simple_repeat	1	45	(0)	3172270
12	31.9	0.0	0.0	chr5	91383758	91383804	(90154455)	+	G-rich	Low_complexity	1	47	(0)	3176171
496	36.5	3.9	0.8	chr5	95177783	95178028	(86360231)	C	L2	LINE/L2	(1102)	2317	2064	3180780
8747	11.8	3.4	1.9	chr5	95178045	95178366	(86359893)	+	L1PBa	LINE/L1	961	1310	(5552)	3180781
422	11.3	0.0	0.0	chr5	95178367	95178419	(86359840)	C	AluSz6	SINE/Alu	(29)	283	231	3180782
27536	2.9	0.1	0.1	chr5	98546666	98552701	(82985558)	+	L1PA3	LINE/L1	125	6155	(0)	3185280
808	22.1	0.6	0.0	chr5	98753499	98753661	(82784598)	C	MER5A1	DNA/hAT-Charlie	(2)	164	1	3185513
981	14.0	3.8	9.6	chr5	98753675	98753871	(82784388)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	3185514
27136	2.9	0.5	0.2	chr5	101180131	101186147	(80352112)	+	L1PA2	LINE/L1	124	6151	(4)	3188628
3406	6.2	0.0	0.7	chr5	106978588	106979038	(74559221)	+	LTR7	LTR/ERV1	1	448	(2)	3195793
15	16.9	0.0	0.0	chr5	108381811	108381837	(73156422)	+	(CA)n	Simple_repeat	1	27	(0)	3197553
12	9.8	0.0	0.0	chr5	108381945	108381966	(73156293)	+	(GCGA)n	Simple_repeat	1	22	(0)	3197554
9665	12.3	1.6	7.9	chr5	108684501	108686389	(72851870)	C	L1P2	LINE/L1	(4409)	1775	8	3197971
820	19.4	4.8	1.2	chr5	112846751	112846912	(68691347)	C	MER5A	DNA/hAT-Charlie	(21)	168	1	3203382
5189	12.8	9.0	11.0	chr5	113775910	113776964	(67761295)	C	HERV4_I-int	LTR/ERV1	(5507)	1032	1	3204741
11	25.3	0.0	4.3	chr5	114361072	114361117	(67177142)	+	G-rich	Low_complexity	1	46	(0)	3205504
13	18.9	2.8	0.0	chr5	114361239	114361274	(67176985)	+	(CCCCGC)n	Simple_repeat	1	37	(0)	3205505
12	20.8	0.0	2.9	chr5	115169937	115169971	(66368288)	+	G-rich	Low_complexity	1	35	(0)	3206387
12	13.9	0.0	0.0	chr5	115180302	115180325	(66357934)	+	(GGC)n	Simple_repeat	1	24	(0)	3206402
15	4.7	0.0	0.0	chr5	115180625	115180646	(66357613)	+	(AAAT)n	Simple_repeat	1	22	(0)	3206403
20	19.2	3.8	0.0	chr5	115544855	115544935	(65993324)	+	G-rich	Low_complexity	1	84	(0)	3206941
18	4.8	0.0	0.0	chr5	116575153	116575174	(64963085)	+	(A)n	Simple_repeat	1	22	(0)	3208282
21891	15.3	2.2	4.7	chr5	117827135	117830344	(63707915)	C	L1PA8A	LINE/L1	(3230)	3101	4	3210105
24938	3.4	0.1	0.4	chr5	119776587	119780799	(61757460)	C	L1PA3	LINE/L1	(1817)	4329	124	3212738
26968	3.8	0.2	0.1	chr5	120421209	120427233	(61111026)	C	L1PA3	LINE/L1	(0)	6155	128	3213503
26945	4.1	0.1	0.3	chr5	120831426	120836963	(60701296)	+	L1PA3	LINE/L1	1	5527	(628)	3213977
26655	2.4	0.1	0.0	chr5	122377545	122383563	(59154696)	C	L1PA2	LINE/L1	(5)	6150	128	3215829
14	18.9	2.8	0.0	chr5	123035496	123035531	(58502728)	+	(CCT)n	Simple_repeat	1	37	(0)	3216854
13	18.4	5.4	0.0	chr5	123423318	123423354	(58114905)	+	(GCC)n	Simple_repeat	1	39	(0)	3217347
26	17.8	3.1	1.5	chr5	123512385	123512449	(58025810)	+	(CTCG)n	Simple_repeat	1	67	(0)	3217484
10911	15.8	4.5	2.5	chr5	123936409	123938127	(57600132)	C	HUERS-P3b-int	LTR/ERV1	(7152)	1767	4	3218011
14	9.3	5.6	2.6	chr5	126601149	126601184	(54937075)	+	(GGAGCCA)n	Simple_repeat	1	38	(0)	3221499
10906	15.2	2.9	4.8	chr5	126673481	126674805	(54863454)	C	HERVH-int	LTR/ERV1	(5556)	2157	848	3221678
28260	2.6	0.1	0.4	chr5	126890287	126896333	(54641926)	C	L1PA3	LINE/L1	(0)	6155	126	3222146
26373	2.7	0.0	0.0	chr5	127733932	127739952	(53798307)	C	L1PA2	LINE/L1	(6)	6149	129	3223218
20	19.5	3.3	1.6	chr5	129904392	129904451	(51633808)	+	GA-rich	Low_complexity	1	62	(0)	3225895
26789	3.7	0.1	0.0	chr5	130817738	130823763	(50714496)	+	L1PA3	LINE/L1	127	6155	(0)	3227014
26250	4.5	0.7	0.1	chr5	130897567	130903669	(50634590)	+	L1PA3	LINE/L1	13	6152	(3)	3227119
15	22.9	1.5	6.1	chr5	132012792	132012856	(49525403)	+	(CAGAGAG)n	Simple_repeat	1	66	(0)	3228815
21507	9.8	2.4	2.8	chr5	132116470	132122838	(49415421)	+	L1PA7	LINE/L1	3	6337	(2)	3228932
15	18.1	2.6	0.0	chr5	133052191	133052250	(48486009)	+	(GCCGGA)n	Simple_repeat	1	61	(0)	3230468
264	33.0	3.7	2.8	chr5	133052684	133052789	(48485470)	+	L2b	LINE/L2	3266	3372	(3)	3230469
726	29.3	0.9	0.0	chr5	133365637	133365844	(48172415)	C	Eulor8	DNA/TcMar?	(141)	421	212	3230882
2546	6.9	1.0	0.7	chr5	134367369	134367673	(47170586)	C	AluSx	SINE/Alu	(6)	306	1	3232415
206	20.8	0.0	0.0	chr5	135400096	135400143	(46138116)	+	MIRb	SINE/MIR	145	192	(76)	3234232
1105	29.3	9.0	1.3	chr5	135400300	135400759	(46137500)	C	L2a	LINE/L2	(0)	3426	2928	3234233
16	19.4	2.4	0.0	chr5	135489093	135489133	(46049126)	+	G-rich	Low_complexity	1	42	(0)	3234367
19	24.5	1.3	5.0	chr5	138033058	138033158	(43505101)	+	(GGCGG)n	Simple_repeat	1	97	(0)	3237963
14	14.9	0.0	3.1	chr5	138338358	138338389	(43199870)	+	(CCCT)n	Simple_repeat	1	32	(0)	3238687
14	12.0	0.0	3.5	chr5	138464200	138464228	(43074031)	+	GA-rich	Low_complexity	1	29	(0)	3238914
38	23.0	0.0	0.0	chr5	138465931	138466014	(43072245)	+	(GCA)n	Simple_repeat	1	84	(0)	3238917
17	21.3	4.1	0.0	chr5	138543114	138543162	(42995097)	+	(GGC)n	Simple_repeat	1	51	(0)	3239069
18	20.2	0.0	2.1	chr5	138575158	138575204	(42963055)	+	(GGCCCGA)n	Simple_repeat	1	47	(0)	3239128
41	2.6	0.0	0.0	chr5	138611211	138611250	(42927009)	+	(GT)n	Simple_repeat	1	40	(0)	3239203
17	10.7	0.0	3.0	chr5	138611596	138611629	(42926630)	+	(TTCC)n	Simple_repeat	1	32	(0)	3239204
2148	11.5	0.7	1.6	chr5	139388860	139389171	(42149088)	C	AluSx	SINE/Alu	(3)	309	1	3240678
605	23.6	16.4	0.0	chr5	139710335	139710512	(41827747)	C	MIRb	SINE/MIR	(30)	238	26	3241349
630	26.7	14.7	2.5	chr5	140205938	140206408	(41331851)	+	L2a	LINE/L2	2831	3359	(67)	3242180
2181	9.3	0.4	0.0	chr5	140244283	140244561	(41293698)	C	AluSp	SINE/Alu	(32)	281	2	3242238
1287	21.6	7.6	12.8	chr5	140244767	140245228	(41293031)	C	MER63B	DNA/hAT-Blackjack	(0)	436	1	3242239
534	29.2	7.4	2.6	chr5	140400501	140400732	(41137527)	C	MIRb	SINE/MIR	(21)	247	4	3242549
13	18.4	0.0	0.0	chr5	140966427	140966457	(40571802)	+	(CCCCCT)n	Simple_repeat	1	31	(0)	3243428
389	29.4	10.7	9.9	chr5	141002518	141002740	(40535519)	+	MIR	SINE/MIR	33	257	(5)	3243486
495	35.5	12.1	1.4	chr5	141848646	141848999	(39689260)	+	L2c	LINE/L2	2991	3387	(0)	3244742
796	26.1	8.0	0.4	chr5	141914610	141914851	(39623408)	+	MIRb	SINE/MIR	6	267	(1)	3244860
279	20.6	14.1	1.4	chr5	142325594	142325667	(39212592)	C	MamRep488	DNA/hAT-Tip100	(77)	142	58	3245724
1176	17.5	3.2	0.0	chr5	142701742	142701952	(38836307)	+	MER20	DNA/hAT-Charlie	1	218	(1)	3246512
346	21.7	0.0	0.0	chr5	142702019	142702078	(38836181)	C	L2a	LINE/L2	(0)	3426	3367	3246513
29419	0.4	0.0	0.1	chr5	146609486	146615534	(34922725)	+	L1HS	LINE/L1	130	6155	(0)	3252865
9695	15.4	3.6	2.8	chr5	147382092	147383300	(34154959)	C	L1M4c	LINE/L1	(5163)	1221	13	3254159
14	18.2	0.0	0.0	chr5	147510016	147510046	(34028213)	+	(AGCC)n	Simple_repeat	1	31	(0)	3254369
15	18.2	4.3	2.1	chr5	147510195	147510240	(34028019)	+	(GCGCAC)n	Simple_repeat	1	48	(0)	3254370
18977	10.5	0.7	2.3	chr5	148279117	148281744	(33256515)	C	L1PA7	LINE/L1	(3824)	2637	5	3255628
300	36.4	10.0	2.5	chr5	150449218	150449420	(31088839)	C	MIRb	SINE/MIR	(43)	225	6	3259964
14	18.9	0.0	2.6	chr5	150449424	150449461	(31088798)	+	(CGTGGC)n	Simple_repeat	1	38	(0)	3259965
201	29.3	6.2	0.0	chr5	150498392	150498466	(31039793)	+	MIR3	SINE/MIR	57	136	(72)	3260105
14	12.7	0.0	0.0	chr5	150656530	150656555	(30881704)	+	(CCG)n	Simple_repeat	1	26	(0)	3260455
37	2.6	0.0	0.0	chr5	150656738	150656776	(30881483)	+	(CGCCCC)n	Simple_repeat	1	39	(0)	3260456
14	12.0	5.3	2.5	chr5	150672266	150672303	(30865956)	+	G-rich	Low_complexity	1	40	(0)	3260490
15	19.7	2.0	3.9	chr5	151157463	151157512	(30380747)	+	(CTCCG)n	Simple_repeat	1	51	(0)	3261275
12	24.5	4.5	0.0	chr5	151758558	151758601	(29779658)	+	(GGC)n	Simple_repeat	1	46	(0)	3262583
27339	2.8	1.8	0.2	chr5	152653966	152659898	(28878361)	C	L1PA2	LINE/L1	(7)	6148	124	3264095
307	31.2	9.1	4.8	chr5	153628961	153629128	(27909131)	C	MIR3	SINE/MIR	(10)	198	23	3265596
13	13.3	2.7	5.3	chr5	153629197	153629233	(27909026)	+	(TCC)n	Simple_repeat	1	38	(0)	3265597
201	25.4	9.5	4.3	chr5	153629433	153629502	(27908757)	C	Tigger19b	DNA/TcMar-Tigger	(170)	380	307	3265598
231	26.7	11.8	5.4	chr5	154521364	154521474	(27016785)	+	MIRc	SINE/MIR	33	151	(117)	3267341
2355	6.9	0.0	0.3	chr5	154521475	154521764	(27016495)	+	AluSg7	SINE/Alu	1	289	(20)	3267342
28	34.9	2.2	3.3	chr5	154682789	154682966	(26855293)	+	(CTCCCCC)n	Simple_repeat	1	182	(0)	3267769
360	35.4	2.2	8.9	chr5	154712326	154712573	(26825686)	+	MIRb	SINE/MIR	1	231	(37)	3267857
40	0.0	0.0	0.0	chr5	157576240	157576276	(23961983)	+	(T)n	Simple_repeat	1	37	(0)	3272958
290	28.1	6.0	4.3	chr5	158013456	158013595	(23524664)	C	UCON132b	DNA/hAT-Tip100	(62)	243	21	3273843
13148	10.1	0.5	1.9	chr5	158945454	158947648	(22590611)	C	L1P3	LINE/L1	(4295)	2204	8	3275354
14	15.2	0.0	7.1	chr5	158957958	158957999	(22580260)	+	A-rich	Low_complexity	1	42	(0)	3275369
456	28.3	6.4	5.1	chr5	160290218	160290254	(21248005)	+	L2b	LINE/L2	3100	3136	(239)	3277857
2306	9.6	0.6	1.3	chr5	160290255	160290567	(21247692)	C	AluSx1	SINE/Alu	(1)	311	1	3277858
12	20.9	0.0	4.8	chr5	160312606	160312647	(21225612)	+	(CCGCGCC)n	Simple_repeat	1	42	(0)	3277908
22	27.1	0.0	0.0	chr5	160312917	160312970	(21225289)	+	(TT)n	Simple_repeat	1	54	(0)	3277909
14	0.0	0.0	0.0	chr5	160370447	160370464	(21167795)	+	(TCC)n	Simple_repeat	1	18	(0)	3278046
223	27.9	9.8	1.8	chr5	160477446	160477558	(21060701)	+	L2c	LINE/L2	3264	3386	(1)	3278235
21541	1.9	0.0	0.0	chr5	166141192	166145692	(15392567)	C	L1HS	LINE/L1	(1503)	4643	143	3286305
30	25.1	3.1	1.0	chr5	166978909	166978939	(14559320)	+	(CG)n	Simple_repeat	1	33	(0)	3287634
49	2.2	0.0	0.0	chr5	166978940	166978985	(14559274)	+	(TG)n	Simple_repeat	1	46	(0)	3287635
30	25.1	3.1	1.0	chr5	166978986	166979050	(14559209)	+	(CG)n	Simple_repeat	2	66	(0)	3287636
55	4.9	0.0	0.0	chr5	166979175	166979237	(14559022)	+	(AGC)n	Simple_repeat	1	63	(0)	3287637
23	5.5	2.5	2.4	chr5	168529354	168529400	(13008859)	+	(CCGCCCG)n	Simple_repeat	1	47	(0)	3290251
258	28.2	9.7	7.1	chr5	170394279	170394419	(11143840)	+	L2b	LINE/L2	3225	3369	(57)	3293517
29	27.4	4.1	3.3	chr5	172284162	172284320	(9253939)	+	GA-rich	Low_complexity	1	160	(0)	3297094
16	15.8	4.5	2.2	chr5	172683572	172683615	(8854644)	+	(GCC)n	Simple_repeat	1	46	(0)	3297973
13	23.8	1.5	7.2	chr5	172770604	172770671	(8767588)	+	(GCGCGCC)n	Simple_repeat	1	69	(0)	3298155
17	6.7	3.0	2.9	chr5	173329777	173329809	(8208450)	+	(CCCCCG)n	Simple_repeat	1	34	(0)	3299414
12	18.8	2.6	2.6	chr5	173330004	173330041	(8208218)	+	G-rich	Low_complexity	1	39	(0)	3299415
230	22.1	11.5	0.0	chr5	173332143	173332219	(8206040)	+	Tigger16a	DNA/TcMar-Tigger	97	183	(774)	3299416
341	26.1	6.2	3.9	chr5	174205148	174205287	(7332972)	+	MLT1K	LTR/ERVL-MaLR	1	145	(303)	3301074
239	32.0	6.1	9.6	chr5	175696400	175696586	(5841673)	+	MIRc	SINE/MIR	37	218	(50)	3303949
480	29.4	3.2	2.7	chr5	175696735	175696919	(5841340)	+	MIR	SINE/MIR	69	254	(8)	3303950
1380	23.1	9.7	2.2	chr5	176697392	176697799	(4840460)	C	LTR16C	LTR/ERVL	(1)	488	47	3305817
17	18.2	0.0	0.0	chr5	176740045	176740075	(4798184)	+	A-rich	Low_complexity	1	31	(0)	3305903
289	31.7	1.9	0.0	chr5	176774699	176774799	(4763460)	C	MIR3	SINE/MIR	(21)	187	85	3305960
313	33.5	6.8	6.5	chr5	176774865	176775285	(4762974)	+	L2b	LINE/L2	2916	3338	(49)	3305961
743	31.4	1.7	0.0	chr5	176803898	176804123	(4734136)	+	MIR	SINE/MIR	32	261	(1)	3306025
11	15.9	12.2	0.0	chr5	177133528	177133576	(4404683)	+	(CGGCAG)n	Simple_repeat	1	55	(0)	3306741
255	39.1	0.0	1.8	chr5	177402766	177402877	(4135382)	C	MIR	SINE/MIR	(43)	219	110	3307345
16	6.5	5.9	2.8	chr5	177447546	177447579	(4090680)	+	(ACCC)n	Simple_repeat	1	36	(0)	3307437
14	24.3	2.0	2.0	chr5	177455933	177455982	(4082277)	+	(GCCCT)n	Simple_repeat	1	51	(0)	3307453
12	13.9	0.0	0.0	chr5	177456202	177456225	(4082034)	+	(GGGA)n	Simple_repeat	1	24	(0)	3307454
311	25.6	11.2	2.1	chr5	177554843	177554956	(3983303)	C	MIRc	SINE/MIR	(32)	236	108	3307612
190	28.2	18.9	2.8	chr5	177555054	177555159	(3983100)	C	L2b	LINE/L2	(32)	3343	3217	3307613
12	4.3	8.3	0.0	chr5	178116186	178116209	(3422050)	+	(CTGCC)n	Simple_repeat	1	26	(0)	3308591
214	35.0	6.7	5.8	chr5	178151137	178151327	(3386932)	C	L2c	LINE/L2	(126)	3261	3069	3308658
929	31.7	12.8	4.3	chr5	178151623	178152294	(3385965)	+	L2c	LINE/L2	2174	2910	(509)	3308659
253	30.5	3.5	0.0	chr5	178556059	178556140	(2982119)	+	L1ME4b	LINE/L1	451	535	(357)	3309394
418	26.8	8.7	0.5	chr5	178577248	178577457	(2960802)	C	MLT1B	LTR/ERVL-MaLR	(161)	229	1	3309430
341	31.6	3.8	0.7	chr5	178577723	178577875	(2960384)	C	MIRb	SINE/MIR	(77)	191	34	3309431
5052	15.4	2.7	0.4	chr5	179059219	179060061	(2478198)	+	L1MA4A	LINE/L1	5436	6298	(5)	3310303
206	35.2	7.3	0.9	chr5	179227950	179228167	(2310092)	C	L2	LINE/L2	(836)	2583	2351	3310521
1521	16.2	5.0	0.3	chr5	179530910	179531249	(2007010)	+	Charlie5	DNA/hAT-Charlie	2265	2621	(3)	3311005
14	0.0	4.8	0.0	chr5	179805715	179805735	(1732524)	+	(GCAG)n	Simple_repeat	1	22	(0)	3311610
27	0.0	0.0	0.0	chr5	179805977	179806002	(1732257)	+	(CCTC)n	Simple_repeat	1	26	(0)	3311611
348	21.4	15.4	5.9	chr5	180331958	180332126	(1206133)	+	Charlie8	DNA/hAT-Charlie	2	189	(2239)	3312435
342	31.8	1.3	2.6	chr5	180332344	180332495	(1205764)	C	L1M6	LINE/L1	(4861)	1635	1486	3312436
18	17.4	7.3	2.7	chr5	180810096	180810163	(728096)	+	(CCAGGCC)n	Simple_repeat	1	73	(0)	3313278
26571	2.2	0.3	0.1	chr5	180902522	180908537	(629722)	C	L1PA2	LINE/L1	(0)	6155	124	3313414
1648	13.6	19.8	1.9	chr5	181028010	181028368	(509891)	C	LTR1A2	LTR/ERV1	(392)	445	7	3313540
4933	15.1	3.1	4.1	chr5	181028379	181028514	(509745)	+	L1MA8	LINE/L1	3951	4081	(3481)	3313536
12	17.6	2.4	4.7	chr6	393109	393150	(170412829)	+	G-rich	Low_complexity	1	43	(0)	3314761
14	24.1	0.0	8.6	chr6	684159	684228	(170121751)	+	GA-rich	Low_complexity	1	70	(0)	3315100
13	12.7	0.0	0.0	chr6	693188	693213	(170112766)	+	(AGGGG)n	Simple_repeat	1	26	(0)	3315114
1519	21.2	2.2	4.6	chr6	1524332	1524697	(169281282)	C	MLT1A0	LTR/ERVL-MaLR	(8)	357	1	3316257
13	18.1	2.0	6.0	chr6	1607691	1607739	(169198240)	+	(GGAGGCA)n	Simple_repeat	1	50	(0)	3316385
12	30.5	3.3	0.0	chr6	1607740	1607750	(169198229)	+	G-rich	Low_complexity	1	62	(0)	3316386
51	22.4	3.1	5.0	chr6	2999648	2999841	(167806138)	+	G-rich	Low_complexity	1	200	(0)	3318233
15	27.1	4.5	0.0	chr6	3068925	3068990	(167736989)	+	G-rich	Low_complexity	1	69	(0)	3318348
16	0.0	0.0	0.0	chr6	3229004	3229021	(167576958)	+	(GT)n	Simple_repeat	1	18	(0)	3318607
32	3.2	0.0	0.0	chr6	3229022	3229053	(167576926)	+	(GA)n	Simple_repeat	1	32	(0)	3318608
11	26.8	3.6	1.8	chr6	3751244	3751298	(167054681)	+	(CCCGCG)n	Simple_repeat	1	57	(0)	3319353
13	13.2	0.0	0.0	chr6	3751561	3751585	(167054394)	+	(CCCG)n	Simple_repeat	1	25	(0)	3319354
12	5.6	0.0	0.0	chr6	5085782	5085800	(165720179)	+	(GCA)n	Simple_repeat	1	19	(0)	3321506
13905	11.2	3.8	1.8	chr6	7347075	7349650	(163456329)	+	L1PB1	LINE/L1	256	2927	(3936)	3324995
28	3.3	0.0	0.0	chr6	11938960	11938990	(158866989)	+	(TTTA)n	Simple_repeat	1	31	(0)	3331945
15	27.4	0.0	7.4	chr6	12750073	12750153	(158055826)	+	G-rich	Low_complexity	1	81	(0)	3333137
847	26.2	8.9	4.8	chr6	14397491	14397843	(156408136)	C	LTR88b	LTR/Gypsy?	(468)	369	1	3335925
280	29.1	1.9	1.9	chr6	15078228	15078332	(155727647)	+	MLT1K	LTR/ERVL-MaLR	468	572	(23)	3337170
2070	13.3	0.0	0.0	chr6	15078338	15078631	(155727348)	C	AluJb	SINE/Alu	(5)	307	14	3337171
16	20.2	0.0	4.1	chr6	16129126	16129174	(154676805)	+	G-rich	Low_complexity	1	49	(0)	3339045
12	14.1	7.3	2.3	chr6	17600548	17600588	(153205391)	+	G-rich	Low_complexity	1	44	(0)	3341453
18	12.8	0.0	0.0	chr6	18122654	18122687	(152683292)	+	(ACGGTC)n	Simple_repeat	1	34	(0)	3342482
21399	10.6	1.8	1.2	chr6	18656104	18662501	(152143478)	+	L1PA8A	LINE/L1	1	6444	(2)	3343415
181	25.0	0.0	0.0	chr6	21586935	21586978	(149219001)	+	L2b	LINE/L2	3328	3371	(4)	3347908
15	12.0	0.0	0.0	chr6	21596241	21596267	(149209712)	+	(TTG)n	Simple_repeat	1	27	(0)	3347919
30	8.1	0.0	0.0	chr6	21596962	21597001	(149208978)	+	(A)n	Simple_repeat	1	40	(0)	3347920
16	21.2	2.6	0.0	chr6	24127075	24127112	(146678867)	+	GA-rich	Low_complexity	1	39	(0)	3351446
12	28.7	1.9	1.9	chr6	24359983	24360035	(146445944)	+	G-rich	Low_complexity	1	54	(0)	3351761
977	16.0	2.3	0.6	chr6	24446095	24446264	(146359715)	+	MLT1B	LTR/ERVL-MaLR	1	173	(217)	3351937
473	29.0	2.7	10.2	chr6	25013413	25013696	(145792283)	C	Charlie8	DNA/hAT-Charlie	(2163)	265	4	3352946
1553	16.2	1.0	5.4	chr6	26249689	26250003	(144555976)	C	AluSz	SINE/Alu	(11)	301	1	3354891
12	19.7	2.3	4.4	chr6	26501645	26501688	(144304291)	+	(CGCCGAG)n	Simple_repeat	1	45	(0)	3355355
548	0.0	0.0	21.3	chr6	27020346	27020439	(143785540)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	3356155
1723	8.8	1.4	0.0	chr6	27824836	27825052	(142980927)	C	AluSc	SINE/Alu	(56)	253	34	3357657
418	25.8	15.0	1.9	chr6	27871082	27871243	(142934736)	C	L1PB4	LINE/L1	(23)	6133	5947	3357736
1918	7.4	1.9	0.8	chr6	27871264	27871519	(142934460)	C	AluSc8	SINE/Alu	(16)	295	37	3357737
2178	12.1	1.0	0.3	chr6	27894136	27894440	(142911539)	C	AluSg4	SINE/Alu	(3)	307	1	3357785
534	24.9	26.3	3.1	chr6	28219124	28219446	(142586533)	+	L1ME4b	LINE/L1	350	750	(142)	3358269
542	1.4	0.0	21.3	chr6	28537590	28537683	(142268296)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	3358789
929	17.6	1.2	0.6	chr6	28537948	28538113	(142267866)	+	AluJb	SINE/Alu	1	167	(145)	3358790
3671	12.2	2.7	0.4	chr6	28775960	28776502	(142029477)	C	LTR6A	LTR/ERV1	(0)	564	9	3359190
4542	8.9	0.2	2.2	chr6	28776602	28777224	(142028755)	+	LTR71B	LTR/ERV1	1	610	(0)	3359192
619	1.4	0.0	0.0	chr6	28863685	28863756	(141942223)	C	tRNA-Ala-GCY_	tRNA	(3)	72	1	3359354
356	35.7	4.9	1.5	chr6	29435014	29435212	(141370767)	+	LTR104_Mam	LTR/Gypsy	1017	1222	(287)	3360098
231	32.2	11.0	0.0	chr6	29435244	29435364	(141370615)	+	LTR104_Mam	LTR/Gypsy	1269	1404	(105)	3360098
12	32.0	0.0	0.0	chr6	29759483	29759532	(141046447)	+	G-rich	Low_complexity	1	50	(0)	3360620
857	15.7	2.5	1.9	chr6	30171502	30171663	(140634316)	C	MER5A1	DNA/hAT-Charlie	(1)	165	3	3361190
302	32.6	0.7	2.2	chr6	30326147	30326284	(140479695)	C	L2b	LINE/L2	(2)	3373	3238	3361433
13	10.7	9.5	2.2	chr6	30647306	30647347	(140158632)	+	GA-rich	Low_complexity	1	46	(0)	3361953
4205	12.2	4.2	0.2	chr6	30845021	30845634	(139960345)	C	LTR9B	LTR/ERV1	(0)	644	5	3362367
20	22.6	0.0	4.5	chr6	30955811	30955877	(139850102)	+	(GCCCCCA)n	Simple_repeat	1	67	(0)	3362552
15	21.8	2.7	0.0	chr6	31739966	31740002	(139065977)	+	(GC)n	Simple_repeat	1	38	(0)	3363802
12	16.8	3.7	7.1	chr6	31806831	31806884	(138999095)	+	(AGCGCG)n	Simple_repeat	1	56	(0)	3363932
680	30.1	10.1	11.1	chr6	32104937	32105563	(138700416)	+	L2c	LINE/L2	2741	3387	(0)	3364389
1263	23.1	10.2	3.2	chr6	32105720	32106222	(138699757)	+	L1ME3A	LINE/L1	5538	6106	(67)	3364394
223	30.2	0.0	0.0	chr6	32193124	32193176	(138612803)	+	L2b	LINE/L2	3317	3369	(6)	3364526
15	13.7	0.0	0.0	chr6	32972077	32972100	(137833879)	+	(CG)n	Simple_repeat	1	24	(0)	3365688
25	20.6	0.0	3.1	chr6	33200310	33200374	(137605605)	+	(CCG)n	Simple_repeat	1	65	(0)	3365969
12	17.7	3.1	0.0	chr6	33315603	33315634	(137490345)	+	(TGAGGA)n	Simple_repeat	1	33	(0)	3366184
247	28.0	14.2	2.1	chr6	33454055	33454248	(137351731)	+	MIRb	SINE/MIR	20	253	(15)	3366469
341	25.0	2.7	1.8	chr6	34006232	34006341	(136799638)	C	LTR104_Mam	LTR/Gypsy	(852)	657	547	3367456
390	27.9	8.3	10.2	chr6	34006321	34006615	(136799364)	C	LTR104_Mam	LTR/Gypsy	(1143)	366	78	3367456
13	22.9	0.0	5.9	chr6	34130076	34130126	(136675853)	+	(TCCC)n	Simple_repeat	1	51	(0)	3367687
23	25.1	0.0	0.0	chr6	34132556	34132614	(136673365)	+	(TCTG)n	Simple_repeat	1	59	(0)	3367692
13	19.1	0.0	0.0	chr6	34142690	34142719	(136663260)	+	(TCGC)n	Simple_repeat	1	30	(0)	3367710
16	7.4	3.2	3.1	chr6	34142809	34142839	(136663140)	+	(GGA)n	Simple_repeat	1	32	(0)	3367711
11	21.6	0.0	4.9	chr6	34227258	34227298	(136578681)	+	(GAGCAGG)n	Simple_repeat	1	41	(0)	3367913
17	25.0	3.5	6.8	chr6	34227365	34227399	(136578580)	+	(CCTCCTC)n	Simple_repeat	1	79	(38)	3367914
16	16.0	4.8	6.1	chr6	34227400	34227462	(136578517)	+	(CCTCC)n	Simple_repeat	1	66	(0)	3367915
17	25.0	3.5	6.8	chr6	34227463	34227477	(136578502)	+	(CCTCCTC)n	Simple_repeat	80	117	(0)	3367914
232	34.1	1.1	1.1	chr6	34227487	34227575	(136578404)	C	L2b	LINE/L2	(3)	3372	3284	3367916
18	7.0	0.0	5.9	chr6	34236747	34236780	(136569199)	+	(GCG)n	Simple_repeat	1	34	(0)	3367935
241	31.7	0.8	3.1	chr6	34527038	34527164	(136278815)	+	ORSL-2b	DNA/hAT-Tip100	359	482	(26)	3368606
25	25.1	0.9	6.2	chr6	34527180	34527290	(136278689)	+	G-rich	Low_complexity	1	112	(0)	3368607
14	15.7	0.0	5.1	chr6	34889208	34889246	(135916733)	+	G-rich	Low_complexity	1	39	(0)	3369411
37	7.2	1.7	1.6	chr6	34889502	34889561	(135916418)	+	(GGC)n	Simple_repeat	1	61	(0)	3369412
12	31.3	0.0	0.0	chr6	35259735	35259781	(135546198)	+	(GCGG)n	Simple_repeat	1	47	(0)	3369993
19	25.7	4.9	1.2	chr6	35731935	35731962	(135074017)	+	(GGAGCG)n	Simple_repeat	1	83	(0)	3371022
13	31.6	0.0	0.0	chr6	35731963	35732013	(135073966)	+	G-rich	Low_complexity	1	51	(0)	3371023
15	26.1	0.0	1.9	chr6	35805334	35805385	(135000594)	+	(GGAGCCG)n	Simple_repeat	1	52	(0)	3371201
12	30.3	1.4	4.2	chr6	35921106	35921175	(134884804)	+	(CCCGCC)n	Simple_repeat	1	71	(0)	3371442
250	30.6	8.3	0.0	chr6	36024360	36024470	(134781509)	C	L2b	LINE/L2	(0)	3375	3255	3371666
431	27.1	8.9	5.9	chr6	36123588	36123892	(134682087)	C	L2b	LINE/L2	(5)	3421	3076	3371838
21	11.4	6.1	1.9	chr6	36124030	36124078	(134681901)	+	GA-rich	Low_complexity	1	52	(0)	3371839
23	23.9	0.0	1.5	chr6	36124085	36124118	(134681861)	+	(TTTC)n	Simple_repeat	1	33	(0)	3371840
38	0.0	0.0	0.0	chr6	36124119	36124153	(134681826)	+	(CCTC)n	Simple_repeat	1	35	(0)	3371841
2291	10.8	0.0	0.0	chr6	36124154	36124479	(134681500)	C	AluSq	SINE/Alu	(0)	313	2	3371842
14	17.1	1.9	7.4	chr6	37169943	37169995	(133635984)	+	(GGCCGG)n	Simple_repeat	1	54	(0)	3374135
13	28.9	0.0	0.0	chr6	37433291	37433332	(133372647)	+	(GGC)n	Simple_repeat	1	42	(0)	3374686
13	27.1	0.0	3.9	chr6	37433376	37433427	(133372552)	+	(GCGG)n	Simple_repeat	1	52	(0)	3374687
13	8.5	4.0	0.0	chr6	37546168	37546192	(133259787)	+	(AAGG)n	Simple_repeat	1	26	(0)	3374870
288	30.2	4.0	0.0	chr6	37546456	37546551	(133259428)	C	MIR	SINE/MIR	(15)	247	148	3374871
14	25.3	2.0	2.0	chr6	37649091	37649139	(133156840)	+	(CGG)n	Simple_repeat	1	50	(0)	3375062
35	32.1	0.0	3.2	chr6	37819784	37819806	(132986173)	+	(CCCGCC)n	Simple_repeat	1	35	(115)	3375438
19	11.5	8.1	4.5	chr6	37819807	37819868	(132986111)	+	(CGCC)n	Simple_repeat	1	67	(0)	3375439
35	32.1	0.0	3.2	chr6	37819869	37819939	(132986040)	+	(CCCGCC)n	Simple_repeat	36	150	(0)	3375438
419	27.4	11.1	6.2	chr6	40329014	40329336	(130476643)	C	L2c	LINE/L2	(25)	3362	3022	3379289
824	19.9	0.0	0.0	chr6	40330588	40330748	(130475231)	+	MER5A1	DNA/hAT-Charlie	2	162	(4)	3379293
13	11.7	4.9	4.7	chr6	41443311	41443351	(129362628)	+	(CGCCGCCT)n	Simple_repeat	1	43	(0)	3381166
29	24.1	5.8	1.6	chr6	41546257	41546376	(129259603)	+	(CTCG)n	Simple_repeat	1	127	(0)	3381373
19	12.1	0.0	0.0	chr6	41682482	41682509	(129123470)	+	(T)n	Simple_repeat	1	28	(0)	3381613
13	18.4	5.7	3.6	chr6	41780087	41780139	(129025840)	+	(GCGCGGAG)n	Simple_repeat	1	56	(0)	3381804
2142	11.6	0.3	0.0	chr6	42050104	42050397	(128755582)	+	AluSz	SINE/Alu	6	300	(12)	3382426
351	24.3	5.3	0.0	chr6	42136878	42136984	(128668995)	+	MER5A1	DNA/hAT-Charlie	46	158	(8)	3382616
596	27.8	1.6	1.6	chr6	42156596	42156778	(128649201)	C	MIRb	SINE/MIR	(82)	186	4	3382668
182	21.1	20.2	1.4	chr6	42156802	42156873	(128649106)	C	MamTip2	DNA/hAT-Tip100	(99)	206	118	3382669
405	31.1	11.1	2.2	chr6	42177208	42177388	(128628591)	+	MIRb	SINE/MIR	70	268	(0)	3382719
182	32.1	10.7	9.9	chr6	42929876	42930228	(127875751)	C	L2c	LINE/L2	(70)	3317	2962	3384363
29	0.0	0.0	0.0	chr6	43021676	43021702	(127784277)	+	(GCCGGG)n	Simple_repeat	1	27	(0)	3384539
245	35.8	0.0	2.1	chr6	43054011	43054107	(127751872)	C	MIR3	SINE/MIR	(17)	191	97	3384600
25	23.4	2.1	4.2	chr6	43076326	43076418	(127729561)	+	(CGGCTC)n	Simple_repeat	1	95	(0)	3384638
14	12.7	2.6	5.1	chr6	43246784	43246821	(127559158)	+	GA-rich	Low_complexity	1	39	(0)	3385000
502	29.0	8.0	5.2	chr6	43635317	43635607	(127170372)	+	L2b	LINE/L2	3076	3375	(0)	3385717
19	28.1	0.0	5.6	chr6	43771865	43771954	(127034025)	+	(CCGCC)n	Simple_repeat	1	90	(0)	3385992
16	14.8	0.0	4.9	chr6	44002458	44002498	(126803481)	+	(CCCCG)n	Simple_repeat	1	41	(0)	3386394
30	0.0	0.0	0.0	chr6	44002767	44002794	(126803185)	+	(GCG)n	Simple_repeat	1	28	(0)	3386395
691	28.6	1.0	0.0	chr6	44043438	44043640	(126762339)	C	MIR	SINE/MIR	(13)	249	45	3386470
234	24.1	0.0	3.3	chr6	44202995	44203054	(126602925)	C	MIR3	SINE/MIR	(66)	142	85	3386762
210	20.0	2.4	0.0	chr6	44203253	44203292	(126602687)	+	MIRb	SINE/MIR	30	70	(198)	3386763
21	12.3	4.5	0.0	chr6	44219787	44219830	(126586149)	+	G-rich	Low_complexity	1	46	(0)	3386808
13	21.1	2.6	0.0	chr6	44313284	44313321	(126492658)	+	(GCCGCT)n	Simple_repeat	1	39	(0)	3386940
233	17.1	0.0	0.0	chr6	44313466	44313506	(126492473)	+	L2a	LINE/L2	3363	3403	(23)	3386941
448	23.3	8.7	2.5	chr6	44313505	44313623	(126492356)	C	L2a	LINE/L2	(0)	3426	3300	3386942
27146	3.3	0.1	0.1	chr6	49791503	49797511	(121008468)	C	L1PA3	LINE/L1	(18)	6137	125	3394905
261	32.7	9.8	1.8	chr6	52077050	52077161	(118728818)	+	L2b	LINE/L2	3249	3370	(5)	3397957
263	34.9	8.8	1.2	chr6	52517702	52517869	(118288110)	C	MamSINE1	SINE/tRNA-RTE	(70)	220	39	3398640
12901	10.0	0.4	0.4	chr6	52855165	52857021	(117948958)	C	L1PA7	LINE/L1	(4635)	1864	1	3399165
14	23.1	2.1	2.1	chr6	53348858	53348904	(117457075)	+	(GGC)n	Simple_repeat	1	48	(0)	3400038
2242	11.0	2.3	0.0	chr6	53542734	53543033	(117262946)	+	AluSx1	SINE/Alu	1	307	(5)	3400323
19	7.2	0.0	0.0	chr6	53544648	53544676	(117261303)	+	(CCT)n	Simple_repeat	1	29	(0)	3400325
26213	4.4	0.2	0.0	chr6	68785159	68790168	(102015811)	C	L1PA4	LINE/L1	(3)	6152	1135	3417128
5384	5.0	4.2	0.8	chr6	68790211	68790914	(102015065)	+	L1P1	LINE/L1	385	1113	(5042)	3417129
15	20.2	0.0	0.0	chr6	69232974	69233007	(101572972)	+	(GCT)n	Simple_repeat	1	34	(0)	3417699
24367	6.3	1.3	0.6	chr6	75682406	75688529	(95117450)	C	L1PA6	LINE/L1	(0)	6327	177	3426617
27249	3.2	0.1	0.2	chr6	76958966	76964983	(93840996)	+	L1PA3	LINE/L1	128	6139	(16)	3428271
25779	5.4	0.3	0.0	chr6	78646743	78652881	(92153098)	+	L1PA4	LINE/L1	1	6155	(0)	3430252
16	19.9	0.0	2.4	chr6	79234607	79234648	(91571331)	+	(GCTGCC)n	Simple_repeat	1	42	(0)	3430987
21	20.9	1.6	3.1	chr6	79537106	79537169	(91268810)	+	(CCACCT)n	Simple_repeat	1	65	(0)	3431371
22836	7.0	0.5	0.2	chr6	79658146	79664304	(91141675)	C	L1PA6	LINE/L1	(0)	6154	1	3431575
13	18.8	4.5	2.2	chr6	79947434	79947477	(90858502)	+	(GCGGCAG)n	Simple_repeat	1	46	(0)	3431998
16	0.0	4.3	0.0	chr6	79947629	79947651	(90858328)	+	(CCCT)n	Simple_repeat	1	24	(0)	3431999
7789	18.0	4.8	5.1	chr6	81969609	81971705	(88834274)	+	L1PA8A	LINE/L1	1	2277	(4222)	3434477
27503	2.5	0.1	0.0	chr6	82558404	82564423	(88241556)	+	L1PA2	LINE/L1	128	6155	(0)	3435319
12	15.8	0.0	3.3	chr6	83859587	83859616	(86946363)	+	(CTCC)n	Simple_repeat	1	30	(0)	3437073
27446	2.8	0.4	0.0	chr6	84626356	84632366	(86173613)	+	L1PA2	LINE/L1	126	6155	(0)	3438079
11	31.9	0.0	0.0	chr6	84767534	84767577	(86038402)	+	(GCGTGT)n	Simple_repeat	1	44	(0)	3438234
13	10.4	2.9	5.6	chr6	85643759	85643793	(85162186)	+	(CGCGCC)n	Simple_repeat	1	36	(0)	3439347
15	0.0	6.2	5.9	chr6	85679150	85679181	(85126798)	+	(GCTG)n	Simple_repeat	1	34	(0)	3439430
350	24.2	0.1	0.0	chr6	85679445	85679519	(85126460)	C	MIRc	SINE/MIR	(53)	155	81	3439431
27427	3.1	0.1	0.0	chr6	86021489	86027515	(84778464)	C	L1PA2	LINE/L1	(3)	6152	124	3439843
13	21.1	2.6	0.0	chr6	89081020	89081057	(81724922)	+	(ACCCCGG)n	Simple_repeat	1	39	(0)	3444134
19	21.7	0.0	0.0	chr6	89081515	89081552	(81724427)	+	G-rich	Low_complexity	1	38	(0)	3444135
1742	17.7	11.3	0.0	chr6	90478005	90478366	(80327613)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3446459
27452	2.6	0.3	0.0	chr6	93631589	93637609	(77168370)	C	L1PA2	LINE/L1	(0)	6155	124	3450330
20	26.0	3.1	6.7	chr6	96015836	96015965	(74790014)	+	(CCTCC)n	Simple_repeat	1	134	(0)	3453177
13	21.2	2.1	4.2	chr6	96016125	96016171	(74789808)	+	(CGC)n	Simple_repeat	1	48	(0)	3453178
16	25.0	0.0	2.0	chr6	96837391	96837439	(73968540)	+	GA-rich	Low_complexity	1	49	(0)	3454211
14	26.7	0.0	0.0	chr6	96837420	96837460	(73968519)	+	(GGC)n	Simple_repeat	1	41	(0)	3454212
28212	1.6	0.0	0.0	chr6	98416503	98422520	(72383459)	+	L1PA2	LINE/L1	128	6146	(9)	3456220
13	20.8	0.0	0.0	chr6	100881277	100881309	(69924670)	+	(CAGA)n	Simple_repeat	1	33	(0)	3459593
15	9.3	7.8	5.5	chr6	100881405	100881455	(69924524)	+	(CCTCCG)n	Simple_repeat	1	55	(0)	3459594
17610	3.1	0.0	0.0	chr6	102722106	102725773	(68080206)	+	L1PA2	LINE/L1	126	3792	(2354)	3461861
13	23.8	2.2	2.1	chr6	104859847	104859892	(65946087)	+	(CCG)n	Simple_repeat	1	47	(0)	3464541
11	10.6	0.0	10.5	chr6	104941037	104941074	(65864905)	+	G-rich	Low_complexity	1	38	(0)	3464694
15	17.2	2.4	2.4	chr6	107670911	107670951	(63135028)	+	(CTGCTT)n	Simple_repeat	1	42	(0)	3469189
337	28.1	0.0	11.6	chr6	107670985	107671173	(63134806)	+	LTR91	LTR/ERVL	32	198	(1)	3469190
24	23.5	3.6	2.3	chr6	107958112	107958194	(62847785)	+	(GCC)n	Simple_repeat	1	86	(0)	3469654
2499	6.5	0.0	0.3	chr6	110981555	110981863	(59824116)	C	AluSx1	SINE/Alu	(4)	308	1	3474772
16	0.0	0.0	0.0	chr6	116461793	116461809	(54344170)	+	(A)n	Simple_repeat	1	17	(0)	3482594
258	26.2	20.4	6.5	chr6	116765801	116765984	(54039995)	C	L3	LINE/CR1	(104)	3995	3780	3483066
4426	9.7	0.2	0.8	chr6	118796301	118796914	(52009065)	+	L1PA4	LINE/L1	1	610	(5545)	3485707
12	22.7	0.0	2.6	chr6	125759664	125759701	(45046278)	+	(CGCAGC)n	Simple_repeat	1	38	(0)	3494773
16	11.3	4.8	4.5	chr6	128883311	128883352	(41922627)	+	(GCA)n	Simple_repeat	1	44	(0)	3498755
27508	2.6	0.1	0.2	chr6	129167161	129173198	(41632781)	C	L1PA2	LINE/L1	(0)	6155	124	3499110
26214	3.0	0.1	0.1	chr6	133142074	133148104	(37657875)	C	L1PA3	LINE/L1	(1)	6154	127	3504855
302	30.2	3.4	0.0	chr6	135055112	135055197	(35750782)	+	L2c	LINE/L2	3286	3374	(13)	3507874
2574	8.1	0.0	0.0	chr6	139313064	139313371	(31492608)	C	AluY	SINE/Alu	(3)	308	1	3514450
2170	17.1	7.5	1.0	chr6	139313372	139313464	(31492515)	+	MER34C_	LTR/ERV1	489	584	(1)	3514449
346	30.1	22.5	3.6	chr6	139376880	139377438	(31428541)	C	L2c	LINE/L2	(1)	3374	2711	3514556
27505	2.5	0.3	0.0	chr6	141746026	141752036	(29053943)	+	L1PA2	LINE/L1	128	6155	(0)	3517652
27554	2.3	0.2	0.0	chr6	141916864	141922880	(28883099)	+	L1PA2	LINE/L1	130	6155	(0)	3517873
12	9.3	0.0	4.0	chr6	142301821	142301845	(28504134)	+	(CGC)n	Simple_repeat	1	25	(0)	3518336
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
19	16.3	0.0	0.0	chr6	143511562	143511597	(27294382)	+	(GCA)n	Simple_repeat	1	36	(0)	3519988
23077	8.3	0.7	0.5	chr6	144971718	144977868	(25828111)	C	L1PA6	LINE/L1	(11)	6143	1	3522137
54	0.0	0.0	0.0	chr6	146028233	146028278	(24777701)	+	(GT)n	Simple_repeat	1	46	(0)	3523493
26004	6.4	0.6	0.1	chr6	148858498	148864630	(21941349)	C	L1PA5	LINE/L1	(0)	6327	177	3527561
771	18.2	7.3	4.6	chr6	148972771	148972943	(21833036)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	3527735
26	29.8	2.3	3.7	chr6	149317406	149317536	(21488443)	+	(GCC)n	Simple_repeat	1	134	(0)	3528245
17	16.3	0.0	0.0	chr6	150005252	150005286	(20800693)	+	(CCGCC)n	Simple_repeat	1	35	(0)	3529502
485	28.9	4.2	3.8	chr6	151089908	151090119	(19715860)	C	Tigger16b	DNA/TcMar-Tigger	(5)	331	119	3531299
23779	8.9	1.0	2.4	chr6	151711521	151717313	(19088666)	C	L1PA7	LINE/L1	(671)	5798	8	3532504
23648	8.2	0.9	1.2	chr6	153110645	153117088	(17688891)	+	L1PA7	LINE/L1	10	6469	(0)	3534461
676	26.8	10.9	0.4	chr6	157237044	157237298	(13568681)	C	MER121	DNA/hAT?	(43)	358	74	3540582
30	0.0	0.0	0.0	chr6	157237315	157237340	(13568639)	+	(TG)n	Simple_repeat	1	26	(0)	3540583
15	0.0	0.0	0.0	chr6	157237341	157237357	(13568622)	+	(CG)n	Simple_repeat	1	17	(0)	3540584
244	29.6	5.2	7.1	chr6	157531421	157531727	(13274252)	+	L2a	LINE/L2	3088	3426	(0)	3541065
18	13.4	0.0	0.0	chr6	157552255	157552287	(13253692)	+	(TGAG)n	Simple_repeat	1	33	(0)	3541094
2730	27.4	14.3	3.8	chr6	157830767	157831845	(12974134)	C	L1MEd	LINE/L1	(5864)	1239	29	3541548
3426	14.1	3.1	0.7	chr6	158194235	158194777	(12611202)	C	LTR6A	LTR/ERV1	(0)	564	9	3542100
2714	13.4	3.4	2.0	chr6	158854266	158854723	(11951256)	C	MER4C	LTR/ERV1	(0)	465	1	3543241
263	25.0	18.1	0.0	chr6	158854766	158854869	(11951110)	C	MER5A1	DNA/hAT-Charlie	(33)	133	7	3543242
21	9.2	2.7	2.6	chr6	159267211	159267247	(11538732)	+	(TC)n	Simple_repeat	1	38	(0)	3543872
33	0.0	0.0	0.0	chr6	159727375	159727405	(11078574)	+	(GGCGGGA)n	Simple_repeat	1	31	(0)	3544510
22	22.7	3.4	4.3	chr6	159727409	159727497	(11078482)	+	(GGCGC)n	Simple_repeat	1	92	(0)	3544511
542	28.7	14.9	2.0	chr6	160278553	160279329	(10526650)	+	L2a	LINE/L2	2509	3400	(26)	3545269
25	24.0	1.0	6.0	chr6	160991941	160991956	(9814023)	+	(GCC)n	Simple_repeat	1	25	(75)	3546055
12	18.8	2.6	2.6	chr6	160991957	160991994	(9813985)	+	(TCCCGCC)n	Simple_repeat	1	39	(0)	3546056
25	24.0	1.0	6.0	chr6	160991995	160992039	(9813940)	+	(GCC)n	Simple_repeat	26	100	(0)	3546055
12	8.9	4.2	0.0	chr6	162857113	162857136	(7948843)	+	(AGCA)n	Simple_repeat	1	25	(0)	3548749
15194	12.4	3.9	1.1	chr6	167351639	167352743	(3453236)	+	Tigger1	DNA/TcMar-Tigger	1	1172	(1246)	3554314
212	28.8	5.2	0.0	chr6	168131491	168131563	(2674416)	+	L2a	LINE/L2	3079	3155	(232)	3555175
13	29.9	0.0	6.4	chr6	168301981	168302058	(2503921)	+	(CCTCCC)n	Simple_repeat	1	78	(0)	3555351
190	31.8	3.1	1.6	chr6	168541039	168541102	(2264877)	C	LFSINE_Vert	SINE/tRNA	(379)	80	16	3555573
12	26.6	0.0	2.3	chr7	519254	519296	(158826677)	+	G-rich	Low_complexity	1	43	(0)	3558444
257	22.7	5.8	0.8	chr7	1368764	1368876	(157977097)	C	MIRc	SINE/MIR	(118)	150	26	3559781
164	23.1	2.2	0.5	chr7	1506507	1506914	(157839059)	+	(CCT)n	Simple_repeat	1	417	(0)	3559987
252	29.7	0.0	7.5	chr7	1506915	1507034	(157838939)	C	L1MA10	LINE/L1	(0)	6334	6224	3559988
2396	6.8	0.0	2.9	chr7	1507198	1507506	(157838467)	C	AluY	SINE/Alu	(11)	300	1	3559989
325	21.7	2.8	0.0	chr7	1558509	1558577	(157787396)	C	MIR3	SINE/MIR	(22)	186	116	3560078
1807	16.2	0.0	0.0	chr7	1576574	1576839	(157769134)	+	AluJr	SINE/Alu	1	266	(46)	3560111
2368	14.1	0.0	3.0	chr7	1576840	1577265	(157768708)	C	MER41B	LTR/ERV1	(109)	525	113	3560112
12	23.3	0.0	0.0	chr7	1667674	1667708	(157678265)	+	(CCCCGG)n	Simple_repeat	1	35	(0)	3560285
652	13.9	0.2	0.1	chr7	2353794	2353900	(156992073)	C	FLAM_C	SINE/Alu	(30)	103	10	3561251
228	29.3	2.4	5.4	chr7	2621235	2621364	(156724609)	+	L2b	LINE/L2	2952	3077	(298)	3561741
238	33.5	6.4	1.0	chr7	2874516	2874545	(156471428)	C	MIRc	SINE/MIR	(43)	225	195	3562188
190	10.3	0.0	0.0	chr7	5450555	5450583	(153895390)	C	MIR3	SINE/MIR	(66)	142	114	3567062
13	21.9	2.3	2.2	chr7	5556699	5556742	(153789231)	+	G-rich	Low_complexity	1	45	(0)	3567328
181	32.3	0.0	1.5	chr7	5562540	5562605	(153783368)	C	L2a	LINE/L2	(346)	3080	3016	3567345
16	28.7	2.5	3.6	chr7	5592618	5592698	(153753275)	+	(GGC)n	Simple_repeat	1	83	(0)	3567435
1765	8.7	15.7	0.4	chr7	5609853	5610106	(153735867)	C	AluSx4	SINE/Alu	(10)	300	1	3567462
13	13.5	4.3	6.2	chr7	5634545	5634590	(153711383)	+	(GGCAG)n	Simple_repeat	1	48	(0)	3567506
13	9.4	8.3	2.6	chr7	6059100	6059135	(153286838)	+	(GCCCA)n	Simple_repeat	1	39	(0)	3568487
445	15.8	1.3	0.0	chr7	6349150	6349225	(152996748)	+	L1MB3	LINE/L1	6060	6136	(47)	3569144
2675	4.6	0.0	0.0	chr7	6349232	6349535	(152996438)	+	AluY	SINE/Alu	1	304	(7)	3569145
2343	6.0	0.0	1.7	chr7	6373632	6373929	(152972044)	C	AluSc	SINE/Alu	(12)	297	5	3569226
2409	7.6	0.0	0.3	chr7	6373948	6374249	(152971724)	C	AluSq2	SINE/Alu	(7)	306	6	3569227
17	27.8	2.4	3.5	chr7	6374414	6374496	(152971477)	+	G-rich	Low_complexity	1	85	(0)	3569228
25	27.2	1.9	3.6	chr7	6374618	6374631	(152971342)	+	(GCCCCGC)n	Simple_repeat	1	105	(0)	3569229
21	17.1	5.6	6.4	chr7	6374632	6374720	(152971253)	+	(CGC)n	Simple_repeat	1	94	(0)	3569230
6143	11.9	1.1	1.0	chr7	6901997	6902963	(152443010)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3570363
309	30.2	10.4	6.4	chr7	7969024	7969225	(151376748)	C	L1M4b	LINE/L1	(6249)	618	408	3571874
17	22.7	2.2	0.0	chr7	7969361	7969406	(151376567)	+	(CCT)n	Simple_repeat	1	47	(0)	3571875
12	16.9	2.9	2.8	chr7	7969428	7969462	(151376511)	+	(CGC)n	Simple_repeat	1	36	(0)	3571876
3970	10.9	4.0	0.3	chr7	10908421	10909061	(148436912)	+	LTR9C	LTR/ERV1	1	666	(0)	3575489
23777	7.8	0.5	0.3	chr7	12427747	12432489	(146913484)	C	L1PA6	LINE/L1	(1395)	4924	174	3577360
27516	2.6	0.1	0.0	chr7	13806270	13812292	(145533681)	+	L1PA2	LINE/L1	128	6154	(1)	3579205
27385	4.3	0.7	0.6	chr7	14278871	14285021	(145060952)	+	L1PA3	LINE/L1	4	6152	(3)	3579829
27276	3.1	0.5	0.0	chr7	18985073	18991069	(140354904)	C	L1PA3	LINE/L1	(0)	6155	126	3586020
27260	3.3	0.4	0.3	chr7	19687648	19689425	(139656548)	C	L1PA2	LINE/L1	(3965)	2190	414	3586773
17181	16.2	2.2	1.6	chr7	19981882	19984901	(139361072)	C	L1MA1	LINE/L1	(4511)	3054	15	3587124
17	20.1	4.8	5.8	chr7	20201435	20201452	(139144521)	+	(AGGCAG)n	Simple_repeat	1	38	(49)	3587433
12	17.0	2.2	6.5	chr7	20201453	20201497	(139144476)	+	G-rich	Low_complexity	1	46	(0)	3587434
17	20.1	4.8	5.8	chr7	20201498	20201517	(139144456)	+	(AGGCAG)n	Simple_repeat	39	87	(0)	3587433
22	22.4	1.8	0.0	chr7	20785521	20785577	(138560396)	+	(GCC)n	Simple_repeat	1	58	(0)	3588260
12	27.5	1.8	3.5	chr7	20785802	20785857	(138560116)	+	GA-rich	Low_complexity	1	57	(0)	3588261
22	16.7	0.0	8.4	chr7	22193797	22193867	(137152106)	+	G-rich	Low_complexity	1	71	(0)	3590314
12	20.1	2.9	0.0	chr7	23182167	23182200	(136163773)	+	(GCA)n	Simple_repeat	1	35	(0)	3591849
25	6.7	3.8	5.5	chr7	23470542	23470594	(135875379)	+	GA-rich	Low_complexity	1	55	(0)	3592401
12	13.0	0.0	9.8	chr7	23471439	23471479	(135874494)	+	G-rich	Low_complexity	1	41	(0)	3592402
265	36.0	0.0	1.1	chr7	24715826	24715915	(134630058)	+	MIR3	SINE/MIR	68	156	(52)	3594276
883	23.4	1.5	5.9	chr7	24716180	24716465	(134629508)	C	L1MC5	LINE/L1	(16)	9288	9016	3594277
18	28.9	2.2	3.3	chr7	27130798	27130886	(132215087)	+	(CCCCT)n	Simple_repeat	1	91	(0)	3598046
13	14.0	0.0	5.7	chr7	27130912	27130946	(132215027)	+	(CCGCC)n	Simple_repeat	1	35	(0)	3598047
18611	5.2	1.2	0.1	chr7	27447206	27449676	(131896297)	C	L1P2	LINE/L1	(3656)	2490	8	3598516
13	7.1	6.2	2.9	chr7	30594954	30594985	(128750988)	+	(TGCTGC)n	Simple_repeat	1	34	(0)	3603361
21	21.9	4.0	3.8	chr7	30671858	30671932	(128674041)	+	GA-rich	Low_complexity	1	75	(0)	3603458
187	28.1	3.0	0.0	chr7	30672157	30672220	(128673753)	+	L2c	LINE/L2	3095	3160	(227)	3603459
16	18.1	0.0	6.1	chr7	30988588	30988636	(128357337)	+	(CTCC)n	Simple_repeat	1	49	(0)	3603969
814	22.2	16.3	1.5	chr7	31115250	31115582	(128230391)	C	Arthur1B	DNA/hAT-Tip100	(0)	1225	834	3604170
2986	13.0	9.1	1.0	chr7	31767954	31768436	(127577537)	+	LTR22B1	LTR/ERVK	1	526	(0)	3605178
25804	3.0	0.2	0.3	chr7	32682679	32688715	(126657258)	C	L1PA2	LINE/L1	(1)	6154	127	3606632
26613	2.2	0.1	0.0	chr7	33521748	33527773	(125818200)	C	L1PA2	LINE/L1	(2)	6153	125	3607982
286	32.8	4.2	0.9	chr7	35261409	35261522	(124084451)	+	MIR	SINE/MIR	27	144	(118)	3610393
13	21.9	0.0	2.6	chr7	35695017	35695055	(123650918)	+	G-rich	Low_complexity	1	39	(0)	3611056
11	23.9	4.5	0.0	chr7	35801027	35801070	(123544903)	+	(GAGCGG)n	Simple_repeat	1	46	(0)	3611238
20	30.8	3.2	1.0	chr7	35801370	35801462	(123544511)	+	(GGC)n	Simple_repeat	1	96	(0)	3611239
13298	8.8	0.7	3.2	chr7	36255456	36259307	(123086666)	C	L1PA7	LINE/L1	(2644)	3817	1	3611994
27793	2.4	0.2	0.0	chr7	37612054	37618072	(121727901)	C	L1PA3	LINE/L1	(1)	6154	127	3614023
9549	17.8	7.2	1.6	chr7	42882565	42884219	(116461754)	C	MER52A	LTR/ERV1	(0)	1755	1	3621799
1756	15.5	4.2	5.7	chr7	42884220	42884375	(116461598)	+	AluJo	SINE/Alu	167	312	(0)	3621798
12	12.8	5.6	2.6	chr7	43758492	43758527	(115587446)	+	(GGCGCCA)n	Simple_repeat	1	38	(0)	3623125
23	15.4	1.9	1.9	chr7	43758557	43758608	(115587365)	+	(CCCTC)n	Simple_repeat	1	53	(0)	3623126
13	32.2	0.0	6.5	chr7	43758609	43758648	(115587325)	+	(CCCCCCG)n	Simple_repeat	1	92	(0)	3623127
236	30.8	17.0	8.8	chr7	44082076	44082246	(115263727)	C	MIRc	SINE/MIR	(70)	198	5	3623777
13	9.3	0.0	0.0	chr7	44082525	44082547	(115263426)	+	(GCGG)n	Simple_repeat	1	23	(0)	3623778
188	28.8	19.3	0.9	chr7	44885920	44886147	(114459826)	C	L2b	LINE/L2	(180)	3195	2916	3625086
11842	11.7	1.2	1.6	chr7	46015232	46018455	(113327518)	+	L1PA8A	LINE/L1	120	3343	(3118)	3626708
13	15.9	0.0	0.0	chr7	48300298	48300325	(111045648)	+	(TTCA)n	Simple_repeat	1	28	(0)	3629735
1087	26.0	9.1	5.0	chr7	49001586	49002066	(110343907)	+	LTR41C	LTR/ERVL	1	503	(198)	3630582
5469	5.6	0.3	0.0	chr7	49665887	49666605	(109679368)	+	L1P1	LINE/L1	139	859	(5296)	3631416
32	5.3	0.0	0.0	chr7	50450392	50450430	(108895543)	+	(CGTG)n	Simple_repeat	1	39	(0)	3632383
12	18.4	5.4	0.0	chr7	50450432	50450468	(108895505)	+	G-rich	Low_complexity	1	39	(0)	3632384
29	18.0	1.3	4.0	chr7	51316409	51316483	(108029490)	+	(CAC)n	Simple_repeat	1	76	(0)	3633470
13	16.3	2.8	2.7	chr7	55365947	55365982	(103979991)	+	(CGG)n	Simple_repeat	1	37	(0)	3638526
324	32.3	8.8	1.3	chr7	55555412	55555568	(103790405)	+	MIRb	SINE/MIR	93	262	(6)	3638801
17613	6.3	0.2	0.3	chr7	64948007	64950297	(94395676)	+	HERVK9-int	LTR/ERVK	3733	6021	(0)	3646993
1107	14.5	0.0	0.0	chr7	66592458	66592623	(92753350)	+	AluSx	SINE/Alu	146	311	(1)	3650350
376	19.4	0.0	0.0	chr7	66592633	66592694	(92753279)	C	MLT1B	LTR/ERVL-MaLR	(99)	291	230	3650351
43	31.3	2.8	5.0	chr7	66920826	66921080	(92424893)	+	(CA)n	Simple_repeat	1	262	(0)	3651108
12	15.8	0.0	3.3	chr7	66921065	66921094	(92424879)	+	(CACG)n	Simple_repeat	1	30	(0)	3651109
325	25.0	3.3	0.0	chr7	69609067	69609154	(89736819)	C	MIR3	SINE/MIR	(48)	160	70	3657081
306	24.6	19.8	0.8	chr7	73308961	73309091	(86036882)	C	L1M5	LINE/L1	(601)	5523	5362	3664325
21	16.8	3.0	5.8	chr7	73557632	73557698	(85788275)	+	(CGC)n	Simple_repeat	1	69	(0)	3664904
13	17.4	5.3	5.0	chr7	73557829	73557885	(85788088)	+	(CGAGGTG)n	Simple_repeat	1	60	(0)	3664905
876	14.0	0.0	3.5	chr7	73558186	73558328	(85787645)	+	FAM	SINE/Alu	24	161	(24)	3664906
11	13.3	5.7	2.7	chr7	73671472	73671506	(85674467)	+	(CCCTGG)n	Simple_repeat	1	37	(0)	3665214
1305	13.0	6.6	0.5	chr7	73741473	73741672	(85604301)	C	AluSx3	SINE/Alu	(15)	296	84	3665355
2258	11.8	0.3	0.0	chr7	74587163	74587466	(84758507)	+	AluSx1	SINE/Alu	1	305	(7)	3667468
36	0.0	0.0	0.0	chr7	75639563	75639593	(83706380)	+	(GT)n	Simple_repeat	1	31	(0)	3670121
18	0.0	0.0	0.0	chr7	75878896	75878915	(83467058)	+	(G)n	Simple_repeat	1	20	(0)	3670807
347	19.0	6.8	1.0	chr7	76049638	76049724	(83296249)	C	L2a	LINE/L2	(1)	3386	3288	3671215
674	4.7	0.0	0.0	chr7	76186116	76186200	(83159773)	+	LTR8A	LTR/ERV1	1	85	(642)	3671524
13	27.0	1.6	3.2	chr7	76201662	76201722	(83144251)	+	G-rich	Low_complexity	1	62	(0)	3671569
12	11.5	3.2	3.1	chr7	76218411	76218441	(83127532)	+	(TCCCCA)n	Simple_repeat	1	32	(0)	3671616
2213	12.0	1.0	0.0	chr7	76221055	76221354	(83124619)	C	AluSx1	SINE/Alu	(9)	303	1	3671621
16	13.1	0.0	0.0	chr7	76225461	76225485	(83120488)	+	(C)n	Simple_repeat	1	25	(0)	3671634
789	12.6	0.8	2.4	chr7	76225614	76225740	(83120233)	+	AluJr	SINE/Alu	15	139	(173)	3671635
531	29.8	5.1	2.3	chr7	76225751	76225922	(83120051)	C	MIR	SINE/MIR	(14)	248	72	3671636
208	25.6	11.8	1.2	chr7	76302296	76302378	(83043595)	+	MIRb	SINE/MIR	58	150	(118)	3671827
14	3.5	6.1	5.7	chr7	76303882	76303914	(83042059)	+	(GGTGG)n	Simple_repeat	1	35	(0)	3671829
15	24.5	0.0	3.9	chr7	76358446	76358497	(82987476)	+	(CCCGCG)n	Simple_repeat	1	52	(0)	3671937
13	17.6	0.0	2.9	chr7	76358681	76358714	(82987259)	+	GA-rich	Low_complexity	1	34	(0)	3671938
13	25.0	2.0	2.0	chr7	76397687	76397735	(82948238)	+	(CCCGCAG)n	Simple_repeat	1	50	(0)	3672048
27704	2.5	0.0	0.0	chr7	76728486	76734513	(82611460)	+	L1PA3	LINE/L1	126	6155	(0)	3672679
32	9.7	1.7	1.7	chr7	78771117	78771174	(80574799)	+	(TC)n	Simple_repeat	1	59	(0)	3675902
18	13.5	0.0	0.0	chr7	79453600	79453632	(79892341)	+	(GGC)n	Simple_repeat	1	33	(0)	3676790
30	3.5	0.0	0.0	chr7	79453794	79453823	(79892150)	+	(GT)n	Simple_repeat	1	30	(0)	3676791
3502	5.1	0.0	0.7	chr7	83459668	83460118	(75885855)	+	LTR7	LTR/ERV1	1	448	(2)	3682298
20413	12.0	2.3	1.3	chr7	83623761	83630242	(75715731)	C	L1PA7	LINE/L1	(34)	6435	8	3682508
27376	3.0	0.0	0.0	chr7	84062410	84068436	(75277537)	+	L1PA2	LINE/L1	127	6155	(0)	3683092
11712	3.8	0.1	0.3	chr7	84150230	84151670	(75194303)	+	L1PA3	LINE/L1	129	1567	(4588)	3683195
27440	3.0	0.0	0.0	chr7	86340209	86346233	(72999740)	+	L1PA2	LINE/L1	127	6151	(4)	3685846
23964	7.1	0.5	0.9	chr7	87464900	87468654	(71877319)	+	L1PA5	LINE/L1	11	3758	(2388)	3687234
26107	2.8	0.0	0.0	chr7	91583271	91589300	(67756673)	+	L1PA2	LINE/L1	124	6154	(1)	3692629
22857	9.0	1.5	2.4	chr7	91759198	91765185	(67580788)	+	L1PA7	LINE/L1	407	6465	(4)	3692836
495	31.6	6.8	1.7	chr7	92424736	92424970	(66921003)	+	L4_A_Mam	LINE/RTE-X	4740	4987	(3)	3693857
24133	2.8	0.0	0.0	chr7	93586903	93591767	(65754206)	C	L1PA2	LINE/L1	(1154)	4992	127	3695445
19	15.8	0.0	2.3	chr7	94394335	94394378	(64951595)	+	G-rich	Low_complexity	1	44	(0)	3696576
14	18.3	2.7	0.0	chr7	94394589	94394625	(64951348)	+	G-rich	Low_complexity	1	38	(0)	3696577
21	17.1	0.0	2.1	chr7	94656243	94656248	(64689725)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	3696937
19	5.6	5.1	2.4	chr7	94656249	94656287	(64689686)	+	(CCCCCAT)n	Simple_repeat	1	41	(0)	3696938
17	8.1	0.0	0.0	chr7	96322039	96322064	(63023909)	+	(CGG)n	Simple_repeat	1	26	(0)	3699180
21	9.8	0.0	0.0	chr7	99408550	99408582	(59937391)	+	(GCG)n	Simple_repeat	1	33	(0)	3704671
261	28.7	10.3	1.4	chr7	100088687	100088829	(59257144)	C	MIRb	SINE/MIR	(87)	181	26	3705845
11	29.1	3.3	1.6	chr7	100088850	100088909	(59257064)	+	(GCCGCCA)n	Simple_repeat	1	62	(0)	3705846
20	25.0	1.6	1.6	chr7	100088957	100089019	(59256954)	+	(GGC)n	Simple_repeat	1	64	(0)	3705847
22	19.5	0.0	3.5	chr7	100100466	100100522	(59245451)	+	(CCCCCG)n	Simple_repeat	1	57	(0)	3705858
277	10.9	0.0	0.0	chr7	100149689	100149734	(59196239)	+	MADE1	DNA/TcMar-Mariner	1	46	(34)	3705968
13	29.4	0.0	0.0	chr7	100435798	100435843	(58910130)	+	(GCCCGCC)n	Simple_repeat	1	46	(0)	3706569
29	2.2	5.9	3.7	chr7	100479256	100479306	(58866667)	+	(CTC)n	Simple_repeat	1	54	(0)	3706677
17	30.0	0.0	0.0	chr7	100479352	100479408	(58866565)	+	(CTGCTG)n	Simple_repeat	1	57	(0)	3706678
2408	8.1	1.6	0.0	chr7	100570567	100570873	(58775100)	+	AluSx	SINE/Alu	1	312	(0)	3706888
18	20.4	0.0	2.1	chr7	100633361	100633407	(58712566)	+	(GCGCCCC)n	Simple_repeat	1	47	(0)	3707007
1341	17.0	2.2	10.7	chr7	100704877	100705176	(58640797)	+	AluSz6	SINE/Alu	18	291	(21)	3707179
14	11.6	0.0	3.3	chr7	100836858	100836887	(58509086)	+	(TGGGG)n	Simple_repeat	1	30	(0)	3707489
26	21.6	0.0	0.0	chr7	100890969	100891027	(58454946)	+	GA-rich	Low_complexity	1	59	(0)	3707583
1867	10.2	6.8	1.5	chr7	100951031	100951294	(58394679)	C	AluSz	SINE/Alu	(33)	279	1	3707712
17	21.1	4.2	4.7	chr7	100951476	100951547	(58394426)	+	G-rich	Low_complexity	1	71	(0)	3707713
416	23.1	12.6	0.5	chr7	100967324	100967477	(58378496)	+	MIRc	SINE/MIR	32	199	(69)	3707730
1331	17.2	0.0	5.3	chr7	101058300	101058545	(58287428)	+	7SK	RNA	2	234	(97)	3707869
260	26.4	1.1	8.1	chr7	101058611	101058709	(58287264)	C	MIRc	SINE/MIR	(1)	267	176	3707870
13	28.1	0.0	7.6	chr7	101085354	101085432	(58260541)	+	G-rich	Low_complexity	1	79	(0)	3707963
20	21.4	2.8	4.1	chr7	101085609	101085679	(58260294)	+	G-rich	Low_complexity	1	73	(0)	3707964
16	17.9	5.8	1.8	chr7	101165508	101165559	(58180414)	+	(GGCTC)n	Simple_repeat	1	55	(0)	3708140
14	24.7	1.8	3.5	chr7	101202084	101202139	(58143834)	+	G-rich	Low_complexity	1	57	(0)	3708233
190	33.3	0.0	0.0	chr7	101217552	101217611	(58128362)	C	MIR3	SINE/MIR	(49)	159	100	3708258
197	32.0	7.2	2.8	chr7	101244545	101244650	(58101323)	+	MIRb	SINE/MIR	155	265	(3)	3708308
1855	25.1	16.9	2.6	chr7	101299647	101301210	(58044763)	+	L1M2	LINE/L1	95	2372	(4837)	3708458
408	21.2	5.8	8.8	chr7	101402366	101402525	(57943448)	+	MIR3	SINE/MIR	41	195	(13)	3708719
94	21.8	2.7	4.9	chr7	101402530	101402829	(57943144)	+	(TCCT)n	Simple_repeat	1	308	(0)	3708720
238	27.5	1.2	10.1	chr7	101743967	101744055	(57601918)	C	L2c	LINE/L2	(14)	3373	3293	3709559
1674	11.3	11.4	0.0	chr7	101744294	101744558	(57601415)	+	AluSz	SINE/Alu	4	302	(10)	3709560
12409	10.2	1.4	2.4	chr7	103105958	103108134	(56237839)	+	L1PA7	LINE/L1	16	2171	(4328)	3712223
12	21.6	0.0	8.8	chr7	105013729	105013785	(54332188)	+	G-rich	Low_complexity	1	57	(0)	3715004
45	2.3	0.0	0.0	chr7	105014152	105014196	(54331777)	+	(GCC)n	Simple_repeat	1	45	(0)	3715005
18	16.4	0.0	2.7	chr7	105521971	105522021	(53823952)	+	G-rich	Low_complexity	1	49	(0)	3716041
568	31.9	11.6	4.3	chr7	105805473	105805895	(53540078)	C	L2b	LINE/L2	(0)	3375	2918	3716612
12	23.8	3.9	1.9	chr7	106660827	106660877	(52685096)	+	(CGCCGC)n	Simple_repeat	1	53	(0)	3717897
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
400	32.0	6.3	1.7	chr7	108347920	108348120	(50997853)	+	L2c	LINE/L2	3178	3372	(3)	3720399
15	24.9	0.0	5.2	chr7	108456439	108456496	(50889477)	+	(CCCCGC)n	Simple_repeat	1	58	(0)	3720552
14	15.5	0.0	7.1	chr7	108456716	108456757	(50889216)	+	G-rich	Low_complexity	1	42	(0)	3720553
22575	11.9	1.1	2.5	chr7	112641134	112647421	(46698552)	C	L1PA8A	LINE/L1	(9)	6307	126	3726128
27325	3.0	0.2	0.0	chr7	116408861	116414874	(42931099)	+	L1PA3	LINE/L1	126	6151	(4)	3731012
26387	2.0	0.5	0.0	chr7	116718498	116724489	(42621484)	C	L1PA2	LINE/L1	(6)	6149	130	3731463
2107	11.0	0.6	0.0	chr7	121438422	121438749	(37907224)	C	L1P1	LINE/L1	(5468)	687	358	3737681
9705	5.0	0.8	0.0	chr7	121438750	121440798	(37905175)	+	L1PA5	LINE/L1	4089	6150	(4)	3737682
18443	7.6	0.7	0.3	chr7	121708977	121713606	(37632367)	C	L1P2	LINE/L1	(1509)	4810	178	3738090
3987	13.7	14.4	3.2	chr7	122678822	122679810	(36666163)	+	MER11B	LTR/ERVK	1	1222	(14)	3739405
24429	6.4	0.3	0.1	chr7	122834317	122840443	(36505530)	+	L1PA5	LINE/L1	11	6154	(0)	3739620
20	22.7	0.0	0.0	chr7	123692527	123692577	(35653396)	+	(AGGCGG)n	Simple_repeat	1	51	(0)	3740813
15	16.5	3.2	7.7	chr7	123692602	123692664	(35653309)	+	(AGGTGG)n	Simple_repeat	1	65	(0)	3740814
21	16.1	0.0	5.6	chr7	123692782	123692835	(35653138)	+	GA-rich	Low_complexity	1	54	(0)	3740815
3524	5.8	0.0	0.2	chr7	125915291	125915739	(33430234)	+	LTR7	LTR/ERV1	1	448	(2)	3743774
625	18.1	0.0	0.0	chr7	125915742	125915835	(33430138)	+	AluJr4	SINE/Alu	147	240	(72)	3743775
189	33.3	0.0	0.0	chr7	126701063	126701119	(32644854)	C	MIR	SINE/MIR	(4)	258	202	3744765
217	36.0	8.7	4.2	chr7	126701429	126701570	(32644403)	C	MER5A	DNA/hAT-Charlie	(3)	186	38	3744766
41	0.0	0.0	0.0	chr7	128135158	128135192	(31210781)	+	(CA)n	Simple_repeat	1	35	(0)	3746673
371	29.9	7.4	1.8	chr7	128135193	128135266	(31210707)	C	HAL1ME	LINE/L1	(1462)	1003	928	3746672
14	21.2	7.2	4.5	chr7	128352153	128352235	(30993738)	+	(GCCAG)n	Simple_repeat	1	89	(0)	3747054
27	0.0	0.0	0.0	chr7	128739101	128739126	(30606847)	+	(GGGGCT)n	Simple_repeat	1	26	(0)	3747901
12	13.7	0.0	0.0	chr7	128783387	128783410	(30562563)	+	(CTG)n	Simple_repeat	1	24	(0)	3747962
653	0.0	0.0	0.0	chr7	128783450	128783521	(30562452)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	3747963
15	18.3	2.1	4.2	chr7	129188540	129188586	(30157387)	+	(CTCCC)n	Simple_repeat	1	48	(0)	3748679
12	22.1	0.0	0.0	chr7	129434515	129434546	(29911427)	+	(AACGGC)n	Simple_repeat	1	32	(0)	3749137
18	14.0	0.0	0.0	chr7	129611701	129611732	(29734241)	+	(CGG)n	Simple_repeat	1	32	(0)	3749522
13	21.0	3.2	6.2	chr7	129611757	129611818	(29734155)	+	(AGGCGC)n	Simple_repeat	1	64	(0)	3749523
13	10.0	0.0	0.0	chr7	129780818	129780839	(29565134)	+	(GCC)n	Simple_repeat	1	22	(0)	3749821
353	23.5	2.2	3.3	chr7	129782953	129783081	(29562892)	+	MIRc	SINE/MIR	40	160	(102)	3749822
910	24.5	7.9	6.8	chr7	129824681	129825091	(29520882)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	143	3749923
24796	6.5	0.2	0.2	chr7	130249391	130255183	(29090790)	C	L1PA6	LINE/L1	(369)	5785	1	3750856
18	25.3	1.7	1.7	chr7	131110039	131110096	(28235877)	+	GA-rich	Low_complexity	1	59	(0)	3752139
729	26.9	4.2	2.2	chr7	131557547	131557778	(27788195)	+	MIRb	SINE/MIR	25	261	(7)	3753014
364	26.3	10.3	4.7	chr7	132187907	132188088	(27157885)	C	MIRb	SINE/MIR	(61)	207	5	3754041
12120	10.3	1.6	4.0	chr7	133327357	133330647	(26015326)	C	L1P2	LINE/L1	(2917)	3544	231	3755793
274	27.4	9.3	2.5	chr7	135170070	135170189	(24175784)	C	MIRb	SINE/MIR	(110)	158	30	3758537
17	23.7	3.9	0.0	chr7	138798220	138798271	(20547702)	+	GA-rich	Low_complexity	1	54	(0)	3764352
18	25.3	4.2	1.3	chr7	139035791	139035862	(20310111)	+	(CCGCCT)n	Simple_repeat	1	75	(0)	3764776
12	18.7	4.3	4.2	chr7	139036021	139036066	(20309907)	+	(CGCGG)n	Simple_repeat	1	48	(0)	3764777
14	17.3	5.1	0.0	chr7	139036105	139036143	(20309830)	+	(GCCTGG)n	Simple_repeat	1	41	(0)	3764778
15	17.8	2.6	0.0	chr7	139360345	139360382	(19985591)	+	G-rich	Low_complexity	1	39	(0)	3765423
580	33.0	7.0	0.9	chr7	140231749	140231977	(19113996)	C	MIRc	SINE/MIR	(14)	254	11	3766943
675	29.3	4.6	1.4	chr7	140479687	140479936	(18866037)	+	MIRb	SINE/MIR	1	261	(7)	3767542
19	4.3	0.0	0.0	chr7	141071482	141071505	(18274468)	+	(GA)n	Simple_repeat	1	24	(0)	3768721
1701	15.2	7.9	5.1	chr7	141577081	141577427	(17768546)	+	MER4B	LTR/ERV1	24	388	(222)	3769517
1870	16.3	1.2	1.5	chr7	141577428	141577769	(17768204)	C	MER61A	LTR/ERV1	(0)	341	1	3769518
1701	15.2	7.9	5.1	chr7	141577770	141577815	(17768158)	+	MER4B	LTR/ERV1	389	429	(181)	3769517
1882	10.8	2.3	1.2	chr7	141577816	141578073	(17767900)	C	AluSz	SINE/Alu	(9)	303	43	3769519
33	11.4	1.3	6.5	chr7	146116098	146116173	(13229800)	+	GA-rich	Low_complexity	1	77	(0)	3775457
12	25.6	3.4	3.3	chr7	148884434	148884494	(10461479)	+	(GCGCGC)n	Simple_repeat	1	61	(0)	3779540
26	2.6	4.9	2.3	chr7	149091051	149091091	(10254882)	+	(CAGGGA)n	Simple_repeat	1	43	(0)	3780003
1001	12.7	22.9	1.8	chr7	150378556	150378784	(8967189)	+	AluJo	SINE/Alu	1	292	(20)	3781972
378	31.9	3.3	0.0	chr7	150402496	150402611	(8943362)	C	L2c	LINE/L2	(0)	3387	3268	3782011
319	32.0	0.7	3.2	chr7	150949470	150949627	(8396346)	+	MER112	DNA/hAT-Charlie	98	251	(10)	3782702
13	22.6	6.5	3.7	chr7	150978350	150978426	(8367547)	+	(CCCCCGCT)n	Simple_repeat	1	82	(0)	3782734
25	24.8	1.9	4.7	chr7	150978427	150978434	(8367539)	+	(CGCCCC)n	Simple_repeat	70	106	(0)	3782733
14	22.9	9.0	1.2	chr7	151018766	151018843	(8327130)	+	(GCGCAG)n	Simple_repeat	1	85	(0)	3782791
15	5.8	7.5	4.7	chr7	151440168	151440207	(7905766)	+	(GCCCT)n	Simple_repeat	1	43	(0)	3783433
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
714	21.7	0.7	1.9	chr7	153061796	153061950	(6284023)	C	MER3	DNA/hAT-Charlie	(56)	153	1	3786455
362	22.4	2.3	0.0	chr7	153061951	153062035	(6283938)	C	ERVL-E-int	LTR/ERVL	(2865)	2802	2716	3786454
594	29.6	10.7	3.2	chr7	153062037	153062384	(6283589)	+	LTR16E1	LTR/ERVL	2	380	(158)	3786456
13	10.8	6.7	0.0	chr7	155449380	155449409	(3896564)	+	(TCCCC)n	Simple_repeat	1	32	(0)	3789655
32	0.0	0.0	0.0	chr7	155449413	155449442	(3896531)	+	(CGGAGAG)n	Simple_repeat	1	30	(0)	3789656
17	7.2	0.0	3.2	chr7	155457659	155457689	(3888284)	+	(CGGCC)n	Simple_repeat	1	31	(0)	3789659
14	18.5	3.6	5.3	chr7	155644083	155644137	(3701836)	+	G-rich	Low_complexity	1	57	(0)	3789929
15	26.8	4.1	0.0	chr7	155644152	155644200	(3701773)	+	(GC)n	Simple_repeat	1	51	(0)	3789930
16	27.8	1.8	0.0	chr7	156640631	156640686	(2705287)	+	G-rich	Low_complexity	1	57	(0)	3791165
946	25.5	13.5	4.7	chr7	157298490	157298759	(2047214)	+	MLT1C	LTR/ERVL-MaLR	184	467	(0)	3792222
402	7.2	10.2	2.5	chr7	157298928	157299839	(2046134)	+	(TG)n	Simple_repeat	1	981	(0)	3792224
993	19.0	9.5	1.4	chr7	157310655	157311042	(2034931)	C	LTR54	LTR/ERV1	(5)	505	19	3792253
12	17.6	4.5	4.3	chr7	158705144	158705187	(640786)	+	GA-rich	Low_complexity	1	46	(0)	3793569
13	22.0	4.8	4.5	chr8	1068600	1068662	(144069974)	+	GA-rich	Low_complexity	1	66	(0)	3795434
18	30.2	2.1	3.1	chr8	1823735	1823828	(143314808)	+	G-rich	Low_complexity	1	96	(0)	3796153
26352	4.9	0.3	0.1	chr8	5187030	5193146	(139945490)	+	L1PA3	LINE/L1	9	6137	(18)	3800323
12	17.4	8.9	0.0	chr8	6708877	6708921	(138429715)	+	(CCGGCGTC)n	Simple_repeat	1	49	(0)	3802489
13	13.1	0.0	0.0	chr8	9150704	9150728	(135987908)	+	(GGA)n	Simple_repeat	1	25	(0)	3806005
31	9.8	0.0	0.0	chr8	9908279	9908322	(135230314)	+	(A)n	Simple_repeat	1	44	(0)	3807247
18	18.9	4.2	0.0	chr8	9933877	9933924	(135204712)	+	(GCCTC)n	Simple_repeat	1	50	(0)	3807297
208	37.1	5.3	3.3	chr8	9933976	9934159	(135204477)	+	MIRc	SINE/MIR	19	206	(62)	3807298
1813	12.8	0.0	6.9	chr8	9934178	9934482	(135204154)	+	AluJr	SINE/Alu	13	296	(16)	3807299
22	10.4	0.0	0.0	chr8	9950196	9950227	(135188409)	+	(GT)n	Simple_repeat	1	32	(0)	3807331
415	24.7	9.7	3.2	chr8	10333463	10333666	(134804970)	+	MIR	SINE/MIR	14	226	(42)	3807901
20	0.0	0.0	0.0	chr8	10365143	10365164	(134773472)	+	(A)n	Simple_repeat	1	22	(0)	3807950
17	6.7	3.0	2.9	chr8	11677172	11677204	(133461432)	+	(GGGGA)n	Simple_repeat	1	34	(0)	3809991
11	9.6	8.6	2.6	chr8	13276803	13276837	(131861799)	+	(GCAGGTG)n	Simple_repeat	1	38	(0)	3812420
27643	2.4	0.0	0.1	chr8	16943969	16949995	(128188641)	+	L1PA2	LINE/L1	125	6150	(5)	3817489
14	0.0	0.0	0.0	chr8	17246694	17246711	(127891925)	+	(CTC)n	Simple_repeat	1	18	(0)	3817918
27	6.1	0.0	0.0	chr8	17246733	17246767	(127891869)	+	(GGCGGT)n	Simple_repeat	1	35	(0)	3817919
16	18.2	2.1	4.2	chr8	18387208	18387279	(126751357)	+	(CCG)n	Simple_repeat	1	70	(0)	3819563
21	14.6	0.0	0.0	chr8	19817439	19817476	(125321160)	+	(GCG)n	Simple_repeat	1	38	(0)	3821835
16	9.9	0.0	5.6	chr8	19817790	19817825	(125320811)	+	(CTCCC)n	Simple_repeat	1	36	(0)	3821836
13	16.2	10.4	0.0	chr8	19817826	19817873	(125320763)	+	(TACACCT)n	Simple_repeat	1	53	(0)	3821837
13	14.4	2.3	6.7	chr8	20197135	20197178	(124941458)	+	(CTTCC)n	Simple_repeat	1	45	(0)	3822435
33	2.9	0.0	0.0	chr8	20268154	20268188	(124870448)	+	(CCCCAC)n	Simple_repeat	1	35	(0)	3822552
461	33.2	7.0	5.5	chr8	20458158	20458450	(124680186)	+	L2c	LINE/L2	3087	3384	(3)	3822893
13	24.9	6.9	0.0	chr8	22046317	22046374	(123092262)	+	(CACCTC)n	Simple_repeat	1	62	(0)	3825490
14	22.0	2.0	3.9	chr8	22367197	22367247	(122771389)	+	G-rich	Low_complexity	1	52	(0)	3826083
11	24.9	0.0	2.5	chr8	23246999	23247038	(121891598)	+	(GGCGCG)n	Simple_repeat	1	40	(0)	3827599
183	29.4	5.2	1.1	chr8	23247039	23247131	(121891505)	+	L2b	LINE/L2	3263	3359	(16)	3827600
445	4.2	11.2	0.0	chr8	23287674	23287744	(121850892)	+	MADE1	DNA/TcMar-Mariner	1	80	(0)	3827671
331	35.6	1.7	0.0	chr8	23287816	23287930	(121850706)	+	MIRb	SINE/MIR	23	139	(129)	3827672
26449	2.6	0.1	0.0	chr8	23645194	23651219	(121487417)	C	L1PA2	LINE/L1	(4)	6151	124	3828298
289	31.4	5.0	7.4	chr8	23979344	23979546	(121159090)	+	AmnSINE1	SINE/5S-Deu-L2	378	575	(0)	3828822
53	22.1	1.4	7.4	chr8	26449316	26449527	(118689109)	+	G-rich	Low_complexity	1	215	(0)	3832761
347	26.8	8.7	3.5	chr8	27315167	27315340	(117823296)	+	MER5A	DNA/hAT-Charlie	1	184	(5)	3834169
15	20.6	6.0	0.0	chr8	27490972	27491021	(117647615)	+	(CCTCTC)n	Simple_repeat	1	53	(0)	3834471
14	25.2	0.0	3.9	chr8	27491089	27491139	(117647497)	+	(GGCAG)n	Simple_repeat	1	51	(0)	3834472
79	40.1	0.0	1.6	chr8	28401356	28401720	(116736916)	+	(GT)n	Simple_repeat	1	365	(0)	3836059
66	17.8	6.0	4.8	chr8	28402203	28402437	(116736199)	+	GA-rich	Low_complexity	1	249	(0)	3836061
334	30.2	4.0	1.0	chr8	28737889	28737985	(116400651)	+	MIR3	SINE/MIR	92	191	(17)	3836787
16	28.6	1.7	0.0	chr8	28890493	28890551	(116248085)	+	(CCTCCC)n	Simple_repeat	1	60	(0)	3837025
12	7.2	10.3	0.0	chr8	28890577	28890605	(116248031)	+	(CCCT)n	Simple_repeat	1	32	(0)	3837026
14	11.6	0.0	3.3	chr8	30156267	30156296	(114982340)	+	(CCCCG)n	Simple_repeat	1	30	(0)	3839161
789	18.1	4.0	0.0	chr8	30382835	30382978	(114755658)	C	BC200	scRNA	(45)	155	6	3839679
689	12.0	0.5	5.2	chr8	30383251	30383386	(114755250)	+	FLAM_C	SINE/Alu	8	131	(2)	3839680
890	16.1	1.2	2.4	chr8	30728259	30728426	(114410210)	C	FRAM	SINE/Alu	(10)	166	1	3840309
673	24.6	3.3	0.0	chr8	38512378	38512552	(106626084)	C	MER5A	DNA/hAT-Charlie	(0)	189	9	3852426
244	27.4	6.2	1.9	chr8	38512553	38512660	(106625976)	C	L2b	LINE/L2	(315)	3060	2948	3852427
376	33.0	3.4	1.3	chr8	38626749	38626981	(106511655)	+	CR1-3_Croc	LINE/CR1	2740	2977	(628)	3852662
22740	11.6	1.2	0.4	chr8	39796058	39802438	(105336198)	C	L1PA8A	LINE/L1	(0)	6446	2	3854352
12	19.4	0.0	5.1	chr8	41646614	41646652	(103491984)	+	G-rich	Low_complexity	1	39	(0)	3857381
12	17.1	4.9	2.3	chr8	41895979	41896019	(103242617)	+	(CGCAGCC)n	Simple_repeat	1	43	(0)	3857794
13	13.7	10.0	0.0	chr8	42338712	42338751	(102799885)	+	(CTTC)n	Simple_repeat	1	44	(0)	3858604
18	16.4	5.2	3.3	chr8	43056172	43056229	(102082407)	+	(CGCAGCC)n	Simple_repeat	1	61	(0)	3860029
13	18.5	7.0	0.0	chr8	43056407	43056449	(102082187)	+	(CAGCCC)n	Simple_repeat	1	46	(0)	3860030
14	8.9	11.1	0.0	chr8	48008411	48008446	(97130190)	+	(GTGC)n	Simple_repeat	1	40	(0)	3862762
25	12.2	0.0	0.0	chr8	49911552	49911588	(95227048)	+	(A)n	Simple_repeat	1	37	(0)	3865001
369	31.2	1.8	0.0	chr8	51370073	51370184	(93768452)	+	MIRb	SINE/MIR	86	199	(69)	3866704
12	18.2	6.5	2.0	chr8	52565467	52565512	(92573124)	+	G-rich	Low_complexity	1	49	(0)	3868325
6869	12.3	0.8	2.1	chr8	53018619	53019729	(92118907)	+	L1PA10	LINE/L1	1	1097	(4778)	3869013
24371	5.8	0.2	0.0	chr8	53695163	53700952	(91437684)	C	L1PA3	LINE/L1	(1)	6154	353	3869812
1121	11.4	3.7	0.0	chr8	53700950	53701133	(91437503)	C	L1PA3	LINE/L1	(5963)	192	2	3869812
13	24.4	2.2	2.1	chr8	55103145	55103190	(90035446)	+	(CAG)n	Simple_repeat	1	47	(0)	3871977
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
12	20.4	5.6	3.5	chr8	61288286	61288339	(83850297)	+	(CCGCTCC)n	Simple_repeat	1	57	(0)	3880437
32	2.9	0.0	0.0	chr8	64370275	64370309	(80768327)	+	(GCGAGGG)n	Simple_repeat	1	35	(0)	3884368
12	24.7	3.6	3.5	chr8	64370425	64370480	(80768156)	+	GA-rich	Low_complexity	1	58	(0)	3884369
16	5.5	10.0	2.3	chr8	65842097	65842164	(79296472)	+	(GCGCCCA)n	Simple_repeat	1	73	(0)	3886500
473	13.3	0.0	0.0	chr8	66112938	66113012	(79025624)	C	tRNA-Arg-CGY_	tRNA	(0)	76	2	3886876
12	13.7	0.0	0.0	chr8	66177114	66177137	(78961499)	+	(GCA)n	Simple_repeat	1	24	(0)	3886967
12401	10.1	1.8	2.5	chr8	66228231	66231603	(78907033)	+	L1PA7	LINE/L1	11	3395	(3066)	3887039
1131	22.2	7.5	0.0	chr8	66920694	66920963	(78217673)	C	AluJr	SINE/Alu	(19)	293	2	3888369
4750	10.0	2.6	3.5	chr8	67368824	67369267	(77769369)	+	LTR8	LTR/ERV1	232	690	(1)	3889132
230	21.6	13.6	1.9	chr8	67786273	67786376	(77352260)	C	MIRb	SINE/MIR	(59)	209	92	3889806
290	29.4	16.2	7.6	chr8	67955410	67955748	(77182888)	+	L2c	LINE/L2	2994	3387	(0)	3890064
24	24.6	0.0	0.0	chr8	68330773	68330826	(76807810)	+	(AC)n	Simple_repeat	1	54	(0)	3890566
13	12.4	5.4	2.6	chr8	68330970	68331006	(76807630)	+	(GCGGAGA)n	Simple_repeat	1	39	(0)	3890567
12086	14.3	1.0	0.9	chr8	70804981	70808319	(74330317)	+	L1PA10	LINE/L1	4	3355	(3106)	3894380
422	26.6	8.2	2.8	chr8	71674675	71674936	(73463700)	C	L1ME3Cz	LINE/L1	(62)	862	578	3895531
3501	5.8	0.0	0.7	chr8	71674937	71675387	(73463249)	+	LTR7	LTR/ERV1	1	448	(2)	3895532
18597	9.4	7.8	1.1	chr8	71675390	71678457	(73460179)	+	HERVH-int	LTR/ERV1	1	3290	(4423)	3895532
3248	6.6	1.3	1.1	chr8	71680214	71680660	(73457976)	+	LTR7	LTR/ERV1	1	448	(2)	3895532
23106	6.7	0.6	1.6	chr8	73234867	73241084	(71897552)	C	L1PA6	LINE/L1	(8)	6146	8	3897675
26644	3.9	0.1	0.2	chr8	78350508	78356689	(66781947)	+	L1PA3	LINE/L1	1	6155	(0)	3904594
24714	7.1	0.9	0.1	chr8	78444886	78450991	(66687645)	+	L1PA5	LINE/L1	4	6141	(13)	3904707
23994	7.6	0.4	1.2	chr8	84076804	84083001	(61055635)	C	L1PA5	LINE/L1	(5)	6149	2	3912648
27686	2.4	0.1	0.0	chr8	84464143	84470166	(60668470)	C	L1PA2	LINE/L1	(2)	6153	124	3913214
13	4.2	0.0	10.0	chr8	85177041	85177070	(59961566)	+	(CCT)n	Simple_repeat	1	30	(0)	3914154
12	23.1	0.0	4.5	chr8	85463509	85463552	(59675084)	+	G-rich	Low_complexity	1	44	(0)	3914607
1461	18.5	11.4	9.7	chr8	86059806	86060331	(59078305)	+	LTR49	LTR/ERV1	5	540	(55)	3915421
41	5.7	1.8	1.7	chr8	88327765	88327821	(56810815)	+	(CA)n	Simple_repeat	1	58	(0)	3918474
14	26.7	1.8	1.8	chr8	88327822	88327859	(56810777)	+	(CGCA)n	Simple_repeat	1	38	(0)	3918475
27353	2.7	0.1	0.2	chr8	89535241	89541269	(55597367)	+	L1PA2	LINE/L1	135	6154	(1)	3919944
18	21.2	0.0	0.0	chr8	90082709	90082746	(55055890)	+	(GT)n	Simple_repeat	1	38	(0)	3920710
32	7.2	0.0	0.0	chr8	91040818	91040861	(54097775)	+	(GCTGCTGCC)n	Simple_repeat	1	44	(0)	3921971
25	30.0	0.0	2.1	chr8	91040900	91040992	(54097644)	+	GA-rich	Low_complexity	1	93	(0)	3921972
27453	2.7	0.1	0.0	chr8	91191845	91197868	(53940768)	C	L1PA3	LINE/L1	(0)	6155	126	3922216
12578	9.9	1.1	0.8	chr8	93952404	93953733	(51184903)	C	L1PA8	LINE/L1	(5116)	1345	1	3926096
26766	4.7	0.3	0.2	chr8	94003623	94009766	(51128870)	C	L1PA4	LINE/L1	(0)	6155	4	3926170
12	12.0	3.7	0.0	chr8	94474885	94474911	(50663725)	+	(CCTC)n	Simple_repeat	1	28	(0)	3926895
14	13.8	0.0	5.6	chr8	94475139	94475174	(50663462)	+	(CCTGC)n	Simple_repeat	1	36	(0)	3926896
16	17.5	3.5	5.1	chr8	94640762	94640818	(50497818)	+	(CCCCCT)n	Simple_repeat	1	59	(0)	3927280
28268	2.6	0.1	0.0	chr8	96116678	96122698	(49015938)	+	L1PA2	LINE/L1	131	6155	(0)	3929778
419	31.5	5.2	0.5	chr8	96162098	96162282	(48976354)	C	MIRc	SINE/MIR	(66)	202	9	3929830
22827	11.2	1.9	3.2	chr8	97329197	97335596	(47803040)	C	L1PA7	LINE/L1	(0)	6469	8	3931573
14	28.8	4.1	1.3	chr8	97776270	97776342	(47362294)	+	G-rich	Low_complexity	1	76	(0)	3932413
1537	18.6	3.7	8.9	chr8	98010935	98011329	(47127307)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	3932912
265	27.6	11.9	4.3	chr8	98011352	98011514	(47127122)	C	MIR1_Amn	SINE/MIR	(9)	221	45	3932913
28075	1.7	0.0	0.0	chr8	98614446	98620471	(46518165)	+	L1PA2	LINE/L1	124	6147	(8)	3933918
12	25.6	2.1	2.0	chr8	101080919	101080966	(44057670)	+	(CCTCCC)n	Simple_repeat	1	49	(0)	3938108
26326	2.7	0.0	0.0	chr8	101891501	101897529	(43241107)	+	L1PA2	LINE/L1	125	6155	(0)	3939485
27019	3.8	0.1	0.2	chr8	102316941	102323098	(42815538)	+	L1PA3	LINE/L1	1	6151	(4)	3940101
14	20.9	4.5	0.0	chr8	102412269	102412312	(42726324)	+	(CCCCCT)n	Simple_repeat	1	46	(0)	3940262
108	16.2	2.7	3.7	chr8	102528542	102528802	(42609834)	+	(GTGCTGT)n	Simple_repeat	1	268	(0)	3940563
27524	2.8	0.2	0.0	chr8	103602997	103609018	(41529618)	C	L1PA2	LINE/L1	(0)	6155	124	3942561
11995	21.6	7.0	5.8	chr8	103703535	103708610	(41430026)	C	L1MA4	LINE/L1	(1534)	6028	7	3942655
303	27.3	10.5	1.9	chr8	104464694	104464850	(40673786)	+	L1ME4a	LINE/L1	5948	6119	(5)	3943760
14	9.7	5.7	2.7	chr8	104466965	104466999	(40671637)	+	G-rich	Low_complexity	1	37	(0)	3943763
4786	12.0	3.7	0.6	chr8	106371764	106372473	(38766163)	C	L1PA8A	LINE/L1	(5140)	735	3	3946425
1855	13.1	2.5	1.9	chr8	109262251	109262568	(35876068)	+	MER101B	LTR/ERV1	10	329	(241)	3950604
337	12.5	0.0	0.0	chr8	109262581	109262628	(35876008)	+	Charlie1a	DNA/hAT-Charlie	510	557	(898)	3950605
1560	12.6	2.6	7.4	chr8	109262634	109262773	(35875863)	+	MER101	LTR/ERV1	205	346	(128)	3950606
27586	3.5	0.8	0.1	chr8	114580379	114586371	(30552265)	C	L1PA8	LINE/L1	(0)	6172	126	3957531
19	3.0	5.3	5.0	chr8	116938473	116938510	(28200126)	+	(GGC)n	Simple_repeat	1	40	(0)	3960865
18	9.7	2.9	0.0	chr8	118074078	118074112	(27064524)	+	(TGGGGG)n	Simple_repeat	1	36	(0)	3962661
26183	3.5	0.2	0.2	chr8	118548538	118554688	(26583948)	+	L1PA3	LINE/L1	2	6154	(1)	3963492
27931	1.9	0.2	0.0	chr8	119159399	119165410	(25973226)	C	L1PA2	LINE/L1	(5)	6150	124	3964438
11	24.5	4.9	3.1	chr8	119856107	119856167	(25282469)	+	(GATCCCC)n	Simple_repeat	1	64	(0)	3965498
18902	14.8	1.8	1.4	chr8	122466149	122469289	(22669347)	+	L1PREC2	LINE/L1	11	3166	(3600)	3969909
107	17.0	2.5	2.8	chr8	123206911	123207154	(21931482)	+	(TCCTCC)n	Simple_repeat	1	250	(0)	3971394
224	27.9	1.1	6.1	chr8	124997846	124997944	(20140692)	+	L2c	LINE/L2	3061	3154	(221)	3974744
325	25.3	0.0	2.2	chr8	124997965	124998053	(20140583)	+	L2c	LINE/L2	3300	3386	(1)	3974744
15	19.6	0.0	0.0	chr8	124998387	124998421	(20140215)	+	(GGCAGG)n	Simple_repeat	1	35	(0)	3974745
466	28.8	4.8	1.2	chr8	125386665	125386826	(19751810)	+	MIRc	SINE/MIR	24	191	(77)	3975467
14	26.0	1.7	3.3	chr8	125430092	125430171	(19708465)	+	(CCCCTCT)n	Simple_repeat	1	78	(0)	3975579
21	14.6	0.0	0.0	chr8	125430292	125430329	(19708307)	+	(AGG)n	Simple_repeat	1	38	(0)	3975580
27744	2.4	0.0	0.0	chr8	126799618	126805646	(18332990)	C	L1PA2	LINE/L1	(2)	6153	124	3978213
12	20.1	6.5	4.5	chr8	127736250	127736311	(17402325)	+	(AGCG)n	Simple_repeat	1	66	(0)	3979958
19	7.2	3.5	0.0	chr8	127855098	127855126	(17283510)	+	(TC)n	Simple_repeat	1	30	(0)	3980252
5753	9.7	4.6	0.6	chr8	128144339	128144971	(16993665)	+	L1PA13	LINE/L1	5491	6158	(5)	3980896
597	23.8	7.2	3.5	chr8	128145253	128145452	(16993184)	C	L1ME3Cz	LINE/L1	(9)	988	781	3980898
28034	3.3	0.1	0.1	chr8	128343642	128349674	(16788962)	+	L1PA3	LINE/L1	124	6154	(1)	3981307
478	25.4	3.6	2.6	chr8	130527903	130528087	(14610549)	C	MLT1K	LTR/ERVL-MaLR	(355)	187	11	3985267
2236	16.6	1.2	0.5	chr8	140438002	140438407	(4700229)	C	L1MB7	LINE/L1	(19)	6165	5757	4001943
13	24.0	0.0	7.0	chr8	140634464	140634541	(4504095)	+	(GGTGCCA)n	Simple_repeat	1	72	(0)	4002305
583	28.1	8.0	0.0	chr8	141056440	141056692	(4081944)	C	MLT2F	LTR/ERVL	(108)	555	281	4003092
318	17.1	2.6	5.0	chr8	141056770	141056849	(4081787)	C	MLT2F	LTR/ERVL	(525)	138	61	4003092
1350	23.7	11.3	0.7	chr8	141059905	141060316	(4078320)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	5	4003099
847	20.8	14.8	2.0	chr8	141115804	141116098	(4022538)	C	MLT1C	LTR/ERVL-MaLR	(93)	374	36	4003212
371	29.8	4.7	0.0	chr8	141116124	141116244	(4022392)	+	LTR16B2	LTR/ERVL	336	462	(0)	4003213
14	13.0	9.5	0.0	chr8	141414996	141415037	(3723599)	+	G-rich	Low_complexity	1	46	(0)	4003613
1571	29.8	19.6	2.7	chr8	141515349	141516712	(3621924)	+	L2b	LINE/L2	670	2367	(1052)	4003731
298	24.0	2.6	5.1	chr8	141516957	141517035	(3621601)	+	L2a	LINE/L2	3337	3413	(13)	4003733
1768	30.4	5.0	5.1	chr8	141887982	141889587	(3249049)	+	L1ME3Cz	LINE/L1	4037	5636	(666)	4004264
769	25.6	1.7	0.4	chr8	141889611	141889838	(3248798)	C	MER20B	DNA/hAT-Charlie	(31)	752	522	4004265
84	5.8	3.1	1.5	chr8	142217277	142217405	(2921231)	+	(AAAG)n	Simple_repeat	1	133	(0)	4004661
213	31.7	7.9	0.0	chr8	142383649	142383730	(2754906)	C	MIRb	SINE/MIR	(15)	253	165	4004833
530	28.4	8.9	3.9	chr8	142631863	142632096	(2506540)	C	MLT1F2	LTR/ERVL-MaLR	(20)	540	294	4005122
37	0.0	0.0	0.0	chr8	142632098	142632129	(2506507)	+	(AC)n	Simple_repeat	1	32	(0)	4005123
297	22.8	9.8	0.0	chr8	142943862	142943958	(2194678)	C	MIR3	SINE/MIR	(86)	144	30	4005479
16	16.1	2.8	1.4	chr8	143617538	143617580	(1521056)	+	G-rich	Low_complexity	1	43	(0)	4006383
13	15.3	5.3	2.5	chr8	144050463	144050500	(1088136)	+	GA-rich	Low_complexity	1	40	(0)	4007031
15	10.3	3.0	2.9	chr8	144103719	144103751	(1034885)	+	(GCC)n	Simple_repeat	1	34	(0)	4007110
26	0.0	0.0	0.0	chr8	144327559	144327583	(811053)	+	(GAGGGC)n	Simple_repeat	1	25	(0)	4007453
14	22.1	0.0	4.3	chr8	144475888	144475933	(662703)	+	G-rich	Low_complexity	1	46	(0)	4007649
25	17.5	1.6	1.6	chr8	144786661	144786711	(351925)	+	GA-rich	Low_complexity	11	61	(0)	4008106
34	9.2	0.0	0.0	chr9	3525927	3526019	(134868698)	+	(AG)n	Simple_repeat	1	93	(0)	4013735
26206	5.3	0.6	0.1	chr9	4531072	4537200	(133857517)	+	L1PA4	LINE/L1	2	6155	(0)	4015212
28157	2.6	0.3	0.0	chr9	4605800	4611811	(133782906)	+	L1PA3	LINE/L1	125	6155	(0)	4015329
15829	8.2	1.1	1.8	chr9	5326927	5329021	(133065696)	+	L1P2	LINE/L1	5	2092	(4092)	4016318
2044	13.2	3.2	0.0	chr9	6681834	6682135	(131712582)	C	AluSz6	SINE/Alu	(0)	312	1	4018486
2105	9.0	2.8	0.7	chr9	8599614	8599917	(129794800)	C	AluSp	SINE/Alu	(0)	313	1	4021290
9674	19.4	2.5	0.6	chr9	8599928	8601693	(129793024)	+	L1M1	LINE/L1	111	1911	(5654)	4021291
3673	14.3	5.5	1.4	chr9	9557119	9557779	(128836938)	+	MER4D1	LTR/ERV1	1	690	(210)	4022582
12	24.1	0.0	0.0	chr9	14322573	14322606	(124072111)	+	(CGCCC)n	Simple_repeat	1	34	(0)	4028796
1017	21.4	6.8	1.0	chr9	14562364	14562665	(123832052)	+	MER33	DNA/hAT-Charlie	3	323	(1)	4029173
23	21.8	1.0	8.0	chr9	16727115	16727213	(121667504)	+	(GCGG)n	Simple_repeat	1	100	(0)	4032281
16	15.8	2.2	4.3	chr9	19408910	19408955	(118985762)	+	(AGGCG)n	Simple_repeat	1	47	(0)	4036276
213	23.8	10.0	0.0	chr9	19446879	19446941	(118947776)	C	MIR1_Amn	SINE/MIR	(73)	157	88	4036349
17	4.3	0.0	0.0	chr9	20622409	20622432	(117772285)	+	(CGCT)n	Simple_repeat	1	24	(0)	4038138
18	7.8	0.0	0.0	chr9	20622452	20622478	(117772239)	+	(AGC)n	Simple_repeat	1	27	(0)	4038139
15	22.0	1.7	5.1	chr9	20622547	20622604	(117772113)	+	G-rich	Low_complexity	1	59	(0)	4038140
22	24.5	3.2	4.1	chr9	23831279	23831374	(114563343)	+	(CCTC)n	Simple_repeat	1	95	(0)	4042338
27741	2.3	0.0	0.0	chr9	24574537	24580564	(113814153)	C	L1PA2	LINE/L1	(0)	6155	126	4043283
13	20.4	0.0	4.7	chr9	27771881	27771926	(110622791)	+	(TCTTTC)n	Simple_repeat	1	43	(0)	4047650
17682	16.6	4.8	2.1	chr9	28970323	28972623	(109422094)	+	L1M1	LINE/L1	22	2434	(5131)	4049314
17239	10.9	1.5	1.1	chr9	32128253	32133068	(106261649)	+	L1PA10	LINE/L1	2	4864	(1597)	4053274
16	12.6	6.8	6.3	chr9	33817006	33817064	(104577653)	+	GA-rich	Low_complexity	1	63	(0)	4056030
28	2.9	2.9	0.0	chr9	33817125	33817159	(104577558)	+	(CCCT)n	Simple_repeat	1	36	(0)	4056031
12	24.7	1.4	8.1	chr9	34380815	34380887	(104013830)	+	(GGCGG)n	Simple_repeat	1	74	(0)	4057338
280	26.7	19.1	0.0	chr9	34645098	34645217	(103749500)	+	MIR3	SINE/MIR	29	168	(40)	4057734
2059	14.4	7.2	0.0	chr9	35489069	35489415	(102905302)	+	THE1D	LTR/ERVL-MaLR	8	381	(0)	4058937
21	9.5	0.0	0.0	chr9	35489590	35489623	(102905094)	+	(CCCAC)n	Simple_repeat	1	34	(0)	4058938
18	18.9	2.4	0.0	chr9	35538862	35538903	(102855814)	+	(AGC)n	Simple_repeat	1	43	(0)	4059038
1628	10.6	2.1	0.8	chr9	35657504	35657740	(102736977)	+	AluJb	SINE/Alu	1	240	(72)	4059251
349	21.4	2.1	0.7	chr9	36486966	36487089	(101907628)	+	MIR3	SINE/MIR	48	173	(95)	4060755
15	20.0	6.0	5.7	chr9	36572773	36572855	(101821862)	+	(GTCCGC)n	Simple_repeat	1	88	(0)	4061005
325	27.8	7.3	5.5	chr9	36573096	36573240	(101821477)	+	MIRc	SINE/MIR	38	187	(81)	4061006
19	17.5	2.7	7.8	chr9	37027606	37027680	(101367037)	+	(GCC)n	Simple_repeat	1	77	(0)	4061903
1219	8.5	0.0	2.4	chr9	37592779	37592942	(100801775)	+	AluSx	SINE/Alu	125	284	(28)	4062992
13	14.7	7.9	0.0	chr9	37904198	37904235	(100490482)	+	(GCCCGCG)n	Simple_repeat	1	41	(0)	4063617
16	21.7	0.0	0.0	chr9	38227060	38227091	(100167626)	+	G-rich	Low_complexity	1	32	(0)	4064196
739	17.5	2.2	14.1	chr9	69120531	69120647	(69274070)	C	L1MB3	LINE/L1	(76)	6107	5993	4081040
405	35.0	6.9	6.4	chr9	71250376	71251060	(67143657)	C	L2a	LINE/L2	(0)	3426	2743	4084401
12	25.8	0.0	0.0	chr9	71446731	71446767	(66947950)	+	(CCGGCT)n	Simple_repeat	1	37	(0)	4084666
16	20.0	2.5	0.0	chr9	71910975	71911014	(66483703)	+	(CCG)n	Simple_repeat	1	41	(0)	4085498
509	24.3	7.7	4.0	chr9	72024965	72025140	(66369577)	+	MER5A	DNA/hAT-Charlie	5	187	(2)	4085709
18	11.0	4.9	2.3	chr9	72365284	72365324	(66029393)	+	(CGG)n	Simple_repeat	1	43	(0)	4086364
27913	2.0	0.0	0.0	chr9	74424275	74430304	(63964413)	+	L1PA2	LINE/L1	127	6155	(0)	4089384
12	15.8	0.0	3.3	chr9	75890707	75890736	(62503981)	+	(GAGC)n	Simple_repeat	1	30	(0)	4091628
18	17.2	0.0	5.9	chr9	76394543	76394593	(62000124)	+	(GCCCC)n	Simple_repeat	1	51	(0)	4092455
27242	2.7	0.3	0.1	chr9	79438973	79444977	(58949740)	+	L1PA3	LINE/L1	137	6155	(0)	4097250
409	37.8	0.9	0.0	chr9	80410246	80410462	(57984255)	C	UCON89	DNA/hAT?	(23)	219	1	4098566
310	31.0	4.2	7.1	chr9	82961405	82961574	(55433143)	C	MER131	DNA?	(50)	165	1	4102186
12	27.6	2.3	0.0	chr9	83062526	83062569	(55332148)	+	(CGT)n	Simple_repeat	1	45	(0)	4102320
12	23.6	4.4	0.0	chr9	83707852	83707896	(54686821)	+	(GGCGCA)n	Simple_repeat	1	47	(0)	4103351
14239	8.2	0.1	0.6	chr9	84535108	84536333	(53858384)	C	L1PA5	LINE/L1	(4669)	1486	258	4104871
23852	7.3	1.0	0.6	chr9	85717680	85723818	(52670899)	C	L1PA6	LINE/L1	(0)	6327	178	4106622
20	14.3	2.0	3.9	chr9	86354546	86354595	(52040122)	+	(CGCCC)n	Simple_repeat	1	51	(0)	4107753
28125	2.5	0.4	0.0	chr9	86606054	86612054	(51782663)	C	L1PA2	LINE/L1	(1)	6154	132	4108166
13	21.6	0.0	0.0	chr9	86945965	86945996	(51448721)	+	(TCG)n	Simple_repeat	1	32	(0)	4108700
1868	13.5	0.0	0.0	chr9	89619387	89619638	(48775079)	+	AluSg	SINE/Alu	46	297	(13)	4112741
1333	12.4	5.0	5.0	chr9	90433726	90434023	(47960694)	+	MER1B	DNA/hAT-Charlie	1	298	(41)	4113818
4124	19.6	2.0	1.1	chr9	92991380	92992521	(45402196)	C	L1MA5A	LINE/L1	(3221)	4341	3217	4117514
2766	18.6	13.8	0.5	chr9	92992509	92993141	(45401576)	C	L1MA5A	LINE/L1	(6058)	1508	778	4117514
341	26.9	9.7	4.2	chr9	93600467	93600680	(44794037)	+	MIRb	SINE/MIR	5	235	(33)	4118359
450	23.9	0.0	0.0	chr9	93600800	93600891	(44793826)	C	5S	rRNA	(28)	93	2	4118360
248	30.4	14.0	2.3	chr9	93946228	93946618	(44448099)	+	L2b	LINE/L2	2932	3375	(0)	4118810
26358	2.5	0.1	0.1	chr9	94089083	94095103	(44299614)	C	L1PA2	LINE/L1	(4)	6151	125	4119004
244	21.3	1.3	0.5	chr9	94165714	94165828	(44228889)	C	MIR	SINE/MIR	(98)	170	57	4119125
15	16.6	0.0	10.3	chr9	94166924	94166981	(44227736)	+	G-rich	Low_complexity	1	58	(0)	4119126
12	23.5	1.8	5.4	chr9	95317779	95317833	(43076884)	+	G-rich	Low_complexity	1	56	(0)	4121019
16	19.0	0.0	7.3	chr9	95426789	95426843	(42967874)	+	(CCCGG)n	Simple_repeat	1	55	(0)	4121215
23	29.0	3.3	5.1	chr9	95511220	95511269	(42883448)	+	(CTCC)n	Simple_repeat	1	65	(92)	4121310
12	14.6	0.0	5.9	chr9	95511270	95511303	(42883414)	+	(CCTTCG)n	Simple_repeat	1	34	(0)	4121311
23	29.0	3.3	5.1	chr9	95511304	95511371	(42883346)	+	(CTCC)n	Simple_repeat	66	157	(0)	4121310
842	21.3	1.1	0.5	chr9	96253155	96253338	(42141379)	+	MER5A	DNA/hAT-Charlie	1	185	(4)	4122484
477	32.1	5.1	0.6	chr9	96253413	96253581	(42141136)	C	MIRc	SINE/MIR	(6)	262	86	4122485
2402	11.7	8.4	0.2	chr9	96256835	96257227	(42137490)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4122495
3194	7.4	0.0	7.0	chr9	97219533	97220014	(41174703)	+	LTR7	LTR/ERV1	1	448	(2)	4124162
539	18.1	14.4	5.3	chr9	97222768	97222936	(41171781)	+	L1MA9	LINE/L1	6126	6312	(0)	4124163
17	15.0	4.3	8.2	chr9	97984193	97984262	(40410455)	+	G-rich	Low_complexity	1	73	(0)	4125547
182	21.9	2.4	0.0	chr9	98916967	98917007	(39477710)	C	MIR3	SINE/MIR	(16)	192	151	4127494
10856	2.4	0.2	0.0	chr9	99498742	99500000	(38894717)	+	L1HS	LINE/L1	2	1262	(4770)	4128585
17518	3.2	0.0	0.0	chr9	103237486	103241471	(35153246)	+	L1HS	LINE/L1	125	4110	(2036)	4134089
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
29	24.3	5.2	3.5	chr9	106860928	106861063	(31533654)	+	(CTCCTTT)n	Simple_repeat	1	143	(0)	4139690
629	21.6	17.0	1.9	chr9	107424805	107424964	(30969753)	C	MER33	DNA/hAT-Charlie	(116)	208	7	4140668
2490	14.4	13.8	9.0	chr9	109121265	109121728	(29272989)	C	LTR36	LTR/ERV1	(0)	611	119	4143830
23237	7.1	1.2	0.4	chr9	109660208	109666322	(28728395)	C	L1PA8	LINE/L1	(11)	6161	5	4144928
26443	5.8	0.1	0.3	chr9	110000011	110006173	(28388544)	C	L1PA4	LINE/L1	(0)	6155	2	4145486
13	18.9	4.5	2.2	chr9	112333142	112333185	(26061532)	+	(CCGCGGA)n	Simple_repeat	1	46	(0)	4149606
31	11.6	4.3	2.8	chr9	112486782	112486850	(25907867)	+	(CCCCG)n	Simple_repeat	1	72	(0)	4149957
446	22.4	18.7	5.7	chr9	113610192	113610385	(24784332)	C	MIR	SINE/MIR	(8)	254	30	4152010
16	26.2	1.3	5.3	chr9	114611397	114611471	(23783246)	+	G-rich	Low_complexity	1	76	(0)	4154052
15458	15.4	3.2	0.8	chr9	114888587	114891303	(23503414)	+	L1M1	LINE/L1	14	2590	(4975)	4154606
296	26.0	8.4	3.4	chr9	116687011	116687161	(21707556)	+	MIR3	SINE/MIR	23	175	(33)	4157868
27884	2.5	0.5	0.2	chr9	119169117	119175132	(19219585)	+	L1PA2	LINE/L1	124	6155	(0)	4162480
28	22.1	5.6	0.0	chr9	119369283	119369301	(19025416)	+	(GCTC)n	Simple_repeat	1	62	(48)	4162889
26	17.6	4.0	2.6	chr9	119369302	119369375	(19025342)	+	(CTCTCG)n	Simple_repeat	1	77	(0)	4162890
28	22.1	5.6	0.0	chr9	119369376	119369387	(19025330)	+	(GCTC)n	Simple_repeat	63	110	(0)	4162889
512	30.4	6.8	0.5	chr9	121267415	121267606	(17127111)	C	MIRb	SINE/MIR	(35)	233	29	4166635
250	32.9	7.0	4.6	chr9	121287251	121287403	(17107314)	+	MIR3	SINE/MIR	2	158	(50)	4166676
414	25.8	2.0	0.0	chr9	121287430	121287526	(17107191)	+	MER5A	DNA/hAT-Charlie	72	170	(19)	4166677
16	26.6	5.0	3.1	chr9	122126533	122126650	(16268067)	+	G-rich	Low_complexity	1	120	(0)	4168355
353	31.6	11.7	0.5	chr9	122346316	122346528	(16048189)	+	L2a	LINE/L2	3120	3359	(67)	4168862
733	13.2	0.0	3.3	chr9	122346541	122346661	(16048056)	C	AluJr	SINE/Alu	(76)	236	120	4168863
188	28.0	0.0	0.0	chr9	122346664	122346713	(16048004)	+	L2b	LINE/L2	3301	3350	(25)	4168864
16	21.4	1.9	3.8	chr9	122941035	122941086	(15453631)	+	(GGC)n	Simple_repeat	1	53	(0)	4169822
12	7.5	6.7	3.1	chr9	122941107	122941136	(15453581)	+	(TCC)n	Simple_repeat	1	32	(0)	4169823
24	30.5	1.7	3.3	chr9	124011383	124011501	(14383216)	+	(CTCCCTC)n	Simple_repeat	1	121	(0)	4171699
41	6.1	0.0	0.0	chr9	124011714	124011764	(14382953)	+	(CTC)n	Simple_repeat	1	51	(0)	4171700
484	36.0	4.3	3.8	chr9	124110555	124110664	(14284053)	C	MIRb	SINE/MIR	(14)	254	145	4171951
12	25.8	1.9	3.6	chr9	124758242	124758295	(13636422)	+	(CTCCCCT)n	Simple_repeat	1	55	(0)	4173173
16	15.3	0.0	5.0	chr9	124869136	124869175	(13525542)	+	(GGC)n	Simple_repeat	1	40	(0)	4173429
19	13.2	4.5	7.1	chr9	124869211	124869277	(13525440)	+	(GAGCG)n	Simple_repeat	1	70	(0)	4173430
17	8.2	0.0	0.0	chr9	124869371	124869396	(13525321)	+	(GGC)n	Simple_repeat	1	26	(0)	4173431
441	29.4	4.0	0.2	chr9	126676624	126676823	(11717894)	+	MIR3	SINE/MIR	47	258	(10)	4176813
411	33.0	2.6	0.5	chr9	126705563	126705751	(11688966)	C	MIRb	SINE/MIR	(26)	242	50	4176869
200	30.9	4.7	1.2	chr9	127451080	127451161	(10943556)	C	MIR3	SINE/MIR	(43)	165	81	4178232
1967	9.4	8.9	0.0	chr9	127698906	127699181	(10695536)	C	AluSz	SINE/Alu	(9)	303	1	4178821
273	31.2	19.5	0.4	chr9	127971681	127971960	(10422757)	C	L2b	LINE/L2	(54)	3333	2977	4179430
1435	15.7	7.4	5.5	chr9	128159643	128159935	(10234782)	+	AluJb	SINE/Alu	1	299	(13)	4179863
481	28.3	16.3	3.0	chr9	128397148	128397524	(9997193)	C	L2c	LINE/L2	(272)	3115	2684	4180418
29	17.8	0.0	0.0	chr9	128787274	128787330	(9607387)	+	(GGC)n	Simple_repeat	1	57	(0)	4181331
2376	5.2	1.7	0.7	chr9	128887652	128887940	(9506777)	C	AluY	SINE/Alu	(18)	293	2	4181574
212	34.1	3.6	4.3	chr9	129139771	129139911	(9254806)	+	MIR3	SINE/MIR	1	140	(68)	4182167
219	35.3	4.9	3.7	chr9	129208535	129208778	(9185939)	+	L2c	LINE/L2	2704	2950	(469)	4182321
281	35.2	12.3	0.7	chr9	129208848	129209083	(9185634)	+	L2c	LINE/L2	3094	3340	(35)	4182321
15	22.7	3.3	3.2	chr9	129258476	129258535	(9136182)	+	(GCCCC)n	Simple_repeat	1	62	(0)	4182436
294	31.6	8.6	6.1	chr9	129406429	129406724	(8987993)	+	L2b	LINE/L2	3023	3326	(49)	4182743
240	24.4	10.0	1.1	chr9	129438043	129438133	(8956584)	+	MIRb	SINE/MIR	31	130	(138)	4182822
217	33.6	13.2	0.1	chr9	129438408	129438521	(8956196)	+	MIRb	SINE/MIR	113	243	(19)	4182823
21	14.1	3.3	4.8	chr9	129488103	129488162	(8906555)	+	(CACACT)n	Simple_repeat	1	62	(0)	4182950
245	23.7	2.1	0.0	chr9	129488847	129488932	(8905785)	+	MIR3	SINE/MIR	53	147	(121)	4182953
255	22.9	1.6	1.6	chr9	129488970	129489031	(8905686)	C	MIR3	SINE/MIR	(66)	142	81	4182954
317	24.0	10.3	1.0	chr9	129496302	129496398	(8898319)	+	MIR3	SINE/MIR	99	205	(3)	4182972
239	27.5	5.0	5.8	chr9	129596968	129597200	(8797517)	C	L2b	LINE/L2	(198)	3189	2943	4183214
1875	12.8	11.6	0.9	chr9	130522091	130522429	(7872288)	C	THE1D	LTR/ERVL-MaLR	(0)	381	2	4185208
1541	14.2	0.0	0.9	chr9	130522710	130522941	(7871776)	C	AluJb	SINE/Alu	(81)	231	2	4185209
20	21.3	4.9	3.5	chr9	130681524	130681604	(7713113)	+	(GCGCAC)n	Simple_repeat	1	85	(0)	4185574
17	16.3	3.2	6.2	chr9	131097001	131097062	(7297655)	+	(CCTCCG)n	Simple_repeat	1	64	(0)	4186391
830	18.2	0.0	1.4	chr9	131097253	131097395	(7297322)	C	AluJb	SINE/Alu	(45)	267	127	4186392
14	14.9	5.4	0.0	chr9	131393728	131393764	(7000953)	+	(CCCAGG)n	Simple_repeat	1	39	(0)	4187011
13	18.8	4.5	2.2	chr9	131393757	131393800	(7000917)	+	(CCTGGCT)n	Simple_repeat	1	46	(0)	4187012
227	14.8	0.0	14.1	chr9	131799665	131799735	(6594982)	C	L1M5	LINE/L1	(338)	5824	5764	4187741
1773	17.9	3.0	0.0	chr9	131799736	131800026	(6594691)	C	AluJo	SINE/Alu	(12)	300	1	4187742
182	34.3	8.2	3.6	chr9	132114176	132114314	(6280403)	+	L2a	LINE/L2	3252	3397	(29)	4188254
229	35.6	8.4	2.2	chr9	132114385	132114562	(6280155)	C	L2b	LINE/L2	(255)	3120	2931	4188255
184	34.2	16.3	1.7	chr9	133336544	133336778	(5057939)	C	L2a	LINE/L2	(23)	3403	3128	4190431
12	14.7	3.3	0.0	chr9	133536000	133536029	(4858688)	+	(CTGCCC)n	Simple_repeat	1	31	(0)	4190737
432	28.1	12.6	1.5	chr9	133609631	133609826	(4784891)	+	MIRb	SINE/MIR	49	268	(0)	4190835
306	29.4	3.7	1.2	chr9	134175232	134175424	(4219293)	C	L2c	LINE/L2	(271)	3116	2917	4191680
21	10.4	0.0	6.4	chr9	136118868	136118914	(2275803)	+	(GCGT)n	Simple_repeat	1	47	(0)	4194047
13	12.3	3.8	9.1	chr9	136118938	136118990	(2275727)	+	(GCCTGC)n	Simple_repeat	1	55	(0)	4194048
15	13.2	6.8	2.1	chr9	136363715	136363758	(2030959)	+	(CCCGC)n	Simple_repeat	1	47	(0)	4194303
12	26.5	3.2	3.1	chr9	136410607	136410668	(1984049)	+	(AGCGGA)n	Simple_repeat	1	64	(0)	4194344
292	32.6	14.0	0.0	chr9	136568086	136568392	(1826325)	+	L1MB5	LINE/L1	5818	6174	(0)	4194500
13	14.8	0.0	3.1	chr9	136572379	136572410	(1822307)	+	(CAGAGC)n	Simple_repeat	1	32	(0)	4194507
20	21.8	5.4	4.1	chr9	136847354	136847445	(1547272)	+	(GCCCA)n	Simple_repeat	1	97	(0)	4194873
2201	11.1	1.3	0.0	chr9	137046811	137047108	(1347609)	C	AluSx	SINE/Alu	(9)	303	2	4195149
13	4.3	3.9	3.7	chr9	137667428	137667453	(727264)	+	(CCT)n	Simple_repeat	1	27	(0)	4195994
390	9.6	0.0	0.0	chrX	982102	982153	(155058742)	+	Alu	SINE/Alu	1	52	(81)	4359803
1155	19.6	1.2	5.7	chrX	982149	982462	(155058433)	C	LTR6A	LTR/ERV1	(280)	278	1	4359804
2411	8.5	0.0	0.0	chrX	1108190	1108483	(154932412)	C	AluSq	SINE/Alu	(19)	294	1	4360141
366	26.9	0.0	2.1	chrX	1248777	1248871	(154792024)	C	MLT1C	LTR/ERVL-MaLR	(352)	115	23	4360531
407	20.9	2.5	2.7	chrX	1354417	1355485	(154685410)	+	GA-rich	Low_complexity	1	1096	(0)	4360823
15	12.9	2.8	2.7	chrX	1452708	1452743	(154588152)	+	(CCGGCC)n	Simple_repeat	1	37	(0)	4361000
15	8.8	0.0	0.0	chrX	21374132	21374155	(134666740)	+	(CGC)n	Simple_repeat	1	24	(0)	4394393
12	14.3	4.8	4.5	chrX	24025746	24025787	(132015108)	+	(GTCCCGC)n	Simple_repeat	1	44	(0)	4398624
15	28.4	0.0	4.6	chrX	37685891	37685955	(118354940)	+	(GCC)n	Simple_repeat	1	65	(0)	4417772
22	13.1	6.0	0.0	chrX	38804021	38804070	(117236825)	+	(CCTGC)n	Simple_repeat	1	53	(0)	4419535
334	12.7	14.5	0.0	chrX	39816989	39817059	(116223836)	C	MER103C	DNA/hAT-Charlie	(107)	190	108	4421248
206	26.4	7.8	11.7	chrX	39817078	39817197	(116223698)	C	L2b	LINE/L2	(229)	3146	3032	4421241
388	30.9	0.0	0.9	chrX	39851049	39851156	(116189739)	+	L2c	LINE/L2	3278	3384	(3)	4421313
22472	7.7	1.0	1.4	chrX	44252831	44258609	(111782286)	+	L1PA7	LINE/L1	1	5788	(681)	4428524
12	20.1	4.1	3.9	chrX	47619918	47619966	(108420929)	+	(CGCGG)n	Simple_repeat	1	51	(0)	4434536
3920	16.8	8.6	2.3	chrX	48927191	48927965	(107112930)	C	MER21B	LTR/ERVL	(1)	867	40	4437102
5651	17.0	5.3	8.4	chrX	48927969	48928554	(107112341)	+	L1MC3	LINE/L1	5339	5886	(1899)	4437103
2517	15.4	0.9	3.0	chrX	51440320	51440780	(104600115)	+	L1M1	LINE/L1	22	472	(7093)	4440640
7396	8.7	3.6	2.0	chrX	54142116	54143166	(101897729)	+	L1PA5	LINE/L1	4	1072	(5112)	4445100
25280	4.2	0.3	0.0	chrX	56047266	56053280	(99987615)	C	L1PA4	LINE/L1	(0)	6155	124	4447785
13	19.6	0.0	0.0	chrX	56995464	56995493	(99045402)	+	(GGC)n	Simple_repeat	1	30	(0)	4448724
9565	9.3	2.5	0.6	chrX	64152611	64153903	(91886992)	+	L1PA6	LINE/L1	178	1495	(4862)	4451015
27869	2.9	0.0	0.0	chrX	65614681	65620735	(90420160)	C	L1PA2	LINE/L1	(0)	6155	124	4452629
557	30.7	2.1	1.6	chrX	68846862	68847053	(87193842)	C	MIR3	SINE/MIR	(13)	195	3	4457068
2428	10.3	0.0	0.0	chrX	69220882	69221193	(86819702)	+	AluSx1	SINE/Alu	1	312	(0)	4457790
270	24.2	17.5	1.0	chrX	69221200	69221299	(86819596)	C	MIRb	SINE/MIR	(12)	256	137	4457791
2163	15.3	5.8	2.7	chrX	69223101	69223550	(86817345)	C	LTR29	LTR/ERV1	(0)	622	158	4457795
649	24.4	12.9	1.6	chrX	71532444	71532751	(84508144)	+	Charlie13a	DNA/hAT-Charlie	1034	1381	(133)	4461801
287	30.1	5.6	8.5	chrX	71957791	71958048	(84082847)	C	L2c	LINE/L2	(25)	3362	3113	4462444
52	22.0	0.8	0.0	chrX	73563335	73563363	(82477532)	+	GA-rich	Low_complexity	1	29	(0)	4464581
29	3.2	0.0	0.0	chrX	73563364	73563395	(82477500)	+	(CGT)n	Simple_repeat	1	32	(0)	4464582
52	22.0	0.8	0.0	chrX	73563396	73563487	(82477408)	+	GA-rich	Low_complexity	30	122	(0)	4464583
749	11.3	12.2	0.0	chrX	73847405	73847519	(82193376)	C	FLAM_C	SINE/Alu	(12)	131	1	4464812
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
12	13.6	6.8	4.3	chrX	74924493	74924536	(81116359)	+	(CCATGC)n	Simple_repeat	1	47	(0)	4466272
25398	5.7	0.8	0.1	chrX	76840651	76843389	(79197506)	+	L1PA3	LINE/L1	136	2897	(3249)	4467797
2170	10.6	0.3	0.7	chrX	92098637	92098946	(63941949)	C	AluSp	SINE/Alu	(0)	313	1	4484171
31	7.5	0.0	0.0	chrX	101932397	101932439	(54108456)	+	(T)n	Simple_repeat	1	43	(0)	4496660
9240	16.4	3.3	5.1	chrX	103422780	103424712	(52616183)	C	L1M1	LINE/L1	(5525)	2040	16	4498599
21948	3.3	0.2	0.1	chrX	116941313	116947286	(39093609)	C	L1PA2	LINE/L1	(33)	6295	311	4517179
11	20.9	6.8	0.0	chrX	118975719	118975762	(37065133)	+	G-rich	Low_complexity	1	47	(0)	4520258
591	31.9	7.7	10.4	chrX	120575158	120575784	(35465111)	C	LTR104_Mam	LTR/Gypsy	(383)	1126	518	4523195
713	21.0	5.7	4.3	chrX	120575969	120576177	(35464718)	C	L1MDa	LINE/L1	(6166)	467	256	4523203
4530	18.3	6.0	7.3	chrX	122220748	122222003	(33818892)	+	MER61-int	LTR/ERV1	3991	4917	(300)	4525268
5693	6.6	0.0	0.0	chrX	126459946	126460670	(29580225)	+	L1PA4	LINE/L1	4	728	(5427)	4531181
26949	2.5	0.5	0.9	chrX	131578681	131584735	(24456160)	+	L1PA2	LINE/L1	127	6153	(2)	4538207
14	14.6	0.0	3.1	chrX	133985348	133985379	(22055516)	+	(GGC)n	Simple_repeat	1	32	(0)	4541901
51	29.3	1.3	4.6	chrX	133985596	133985833	(22055062)	+	G-rich	Low_complexity	1	241	(0)	4541902
16	0.0	0.0	0.0	chrX	134171570	134171589	(21869306)	+	(AAT)n	Simple_repeat	1	20	(0)	4542200
26234	2.9	0.2	0.1	chrX	138778308	138784350	(17256545)	+	L1PA3	LINE/L1	130	6155	(0)	4549724
581	20.6	16.5	7.2	chrX	150902747	150903008	(5137887)	+	Charlie18a	DNA/hAT-Charlie	52	342	(0)	4566681
12	12.0	0.0	6.5	chrX	150983078	150983108	(5057787)	+	G-rich	Low_complexity	1	31	(0)	4566878
14	20.5	0.0	0.0	chrX	154478876	154478909	(1561986)	+	(CGTCTG)n	Simple_repeat	1	34	(0)	4571912
13	22.1	3.1	6.0	chrX	154478910	154478936	(1561959)	+	(CCGCGT)n	Simple_repeat	5	67	(0)	4571913
24700	6.5	1.0	0.3	chrY	14861129	14867059	(42360356)	+	L1PA3	LINE/L1	1	5977	(178)	4593595