722	33.6	8.7	6.9	chr1	1614166	1614629	(247341793)	+	MER65D	LTR/ERV1	1	473	(0)	2064
2331	11.3	0.0	0.0	chr1	1614735	1615044	(247341378)	+	AluSg	SINE/Alu	1	310	(0)	2065
520	27.1	13.7	0.0	chr1	6492605	6492774	(242463648)	C	MIRb	SINE/MIR	(20)	248	48	8319
341	27.7	9.7	0.0	chr1	6493266	6493377	(242463045)	+	L2a	LINE/L2	3303	3426	(0)	8320
822	21.9	7.4	0.0	chr1	7150475	7150661	(241805761)	C	MER20	DNA/hAT-Charlie	(17)	202	1	9474
397	29.7	4.8	0.0	chr1	40496238	40496375	(208460047)	C	Charlie18a	DNA/hAT-Charlie	(194)	148	4	78923
15802	17.7	2.4	2.2	chr1	113170475	113172834	(135783588)	+	L1MA4A	LINE/L1	720	3078	(4488)	194619
14	12.5	0.0	0.0	chr1	151406132	151406157	(97550265)	+	(CCA)n	Simple_repeat	1	26	(0)	221143
245	30.6	4.0	11.0	chr1	151819234	151819369	(97137053)	+	MIRc	SINE/MIR	102	227	(41)	221933
186	14.3	2.8	0.0	chr1	155218264	155218298	(93738124)	C	L2a	LINE/L2	(2)	3424	3389	227552
191	34.9	6.3	2.0	chr1	184081905	184082056	(64874366)	+	L3b	LINE/CR1	4916	5074	(158)	272060
12	12.0	3.7	0.0	chr1	184082540	184082566	(64873856)	+	(TTTCC)n	Simple_repeat	1	28	(0)	272061
952	28.2	14.1	1.2	chr1	204076807	204077369	(44879053)	C	L2a	LINE/L2	(0)	3426	2791	300937
742	25.2	11.3	1.2	chr1	204357088	204357332	(44599090)	+	L3	LINE/CR1	3794	4066	(33)	301416
292	35.7	3.0	2.3	chr1	205330317	205330448	(43625974)	C	L2a	LINE/L2	(2)	3424	3241	303230
283	20.6	12.4	1.1	chr1	205330390	205330482	(43625940)	+	MIRc	SINE/MIR	40	144	(124)	303231
23	32.8	3.6	3.5	chr1	205330816	205330988	(43625434)	+	(GAGTGT)n	Simple_repeat	1	173	(0)	303232
16	20.1	5.0	0.0	chr1	205330996	205331035	(43625387)	+	GA-rich	Low_complexity	1	42	(0)	303233
54	0.0	0.0	0.0	chr1	205331036	205331081	(43625341)	+	(GT)n	Simple_repeat	1	46	(0)	303234
1011	15.7	6.4	2.5	chr1	205972783	205975447	(42980975)	+	(CA)n	Simple_repeat	1	2768	(0)	304363
749	23.7	14.2	0.9	chr1	212456465	212456690	(36499732)	C	MIR	SINE/MIR	(0)	262	2	314545
231	30.1	2.7	0.0	chr1	212456708	212456780	(36499642)	+	MER5B	DNA/hAT-Charlie	88	162	(16)	314546
394	25.7	11.6	1.3	chr10	46522675	46522869	(87274553)	C	MIRc	SINE/MIR	(52)	216	1	437798
307	28.5	4.7	1.6	chr10	73918849	73918973	(59878449)	C	MER5B	DNA/hAT-Charlie	(29)	149	21	480159
180	29.2	0.0	12.2	chr10	73919131	73919174	(59878248)	+	L2c	LINE/L2	3281	3317	(70)	480160
2065	11.8	0.0	0.4	chr10	73919175	73919446	(59877976)	C	AluSx	SINE/Alu	(16)	296	26	480161
413	29.9	9.1	5.6	chr10	130282045	130282384	(3515038)	C	MLT1J1	LTR/ERVL-MaLR	(24)	420	68	569350
193	20.0	6.2	0.0	chr11	9765995	9766039	(125320583)	C	MIR3	SINE/MIR	(52)	156	109	586512
426	29.4	2.5	1.6	chr11	9766485	9766647	(125319975)	+	MIRb	SINE/MIR	1	172	(58)	586513
4380	22.7	7.4	2.8	chr11	10011519	10012155	(125074467)	C	L1M4a1	LINE/L1	(664)	1915	1260	586916
1819	17.5	1.4	0.0	chr11	10012156	10012441	(125074181)	C	AluJo	SINE/Alu	(22)	290	1	586919
4380	23.0	9.3	2.2	chr11	10012442	10013577	(125073045)	C	L1M4a1	LINE/L1	(1320)	1259	28	586916
427	28.3	2.0	6.2	chr11	10304025	10304235	(124782387)	+	MIRc	SINE/MIR	59	260	(8)	587343
486	28.6	0.0	0.0	chr11	11227812	11227930	(123858692)	+	MamRep1894	DNA/hAT	1	119	(4)	588847
480	28.6	11.6	1.0	chr11	11227942	11228149	(123858473)	C	MIRc	SINE/MIR	(33)	235	3	588848
206	25.0	10.4	0.0	chr11	11395358	11395417	(123691205)	C	MIRb	SINE/MIR	(20)	248	182	589123
318	23.7	4.3	4.3	chr11	11395418	11395509	(123691113)	C	MIR	SINE/MIR	(30)	232	112	589124
814	34.3	18.4	3.1	chr11	11395498	11396934	(123689688)	+	L3	LINE/CR1	90	1795	(2304)	589125
250	22.6	1.6	0.0	chr11	11411513	11411574	(123675048)	+	MER81	DNA/hAT-Blackjack	1	63	(51)	589145
1013	27.4	4.5	5.2	chr11	11411666	11412111	(123674511)	C	LTR16A1	LTR/ERVL	(13)	443	1	589146
298	21.1	1.4	1.4	chr11	45179378	45179449	(89907173)	C	MIR	SINE/MIR	(96)	166	95	641653
1155	23.1	8.8	1.0	chr11	45179450	45179763	(89906859)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	34	641654
229	22.1	12.5	2.5	chr11	45179783	45179861	(89906761)	C	MIR	SINE/MIR	(162)	100	13	641653
289	29.5	7.5	4.5	chr11	45246763	45246918	(89839704)	C	Charlie15a	DNA/hAT-Charlie	(63)	161	1	641748
353	18.1	5.7	4.6	chr11	46272286	46272372	(88814250)	C	MIR3	SINE/MIR	(5)	203	116	643655
353	23.9	28.5	1.1	chr11	47407652	47407829	(87678793)	+	MIR	SINE/MIR	13	258	(4)	645843
661	25.6	5.4	1.8	chr11	47579615	47579854	(87506768)	C	MIRb	SINE/MIR	(0)	268	5	646206
1351	33.7	12.3	2.1	chr11	47605607	47606921	(87479701)	C	L3	LINE/CR1	(956)	3143	1676	646267
365	32.2	9.4	3.2	chr11	47607041	47607229	(87479393)	+	MIRb	SINE/MIR	7	208	(60)	646268
473	30.3	1.5	7.1	chr11	47918051	47918260	(87168362)	C	MLT1K	LTR/ERVL-MaLR	(393)	202	5	647088
306	23.0	21.5	3.1	chr11	47918384	47918530	(87168092)	+	MIR3	SINE/MIR	13	194	(36)	647089
2254	11.4	1.0	0.0	chr11	47918713	47919018	(87167604)	C	AluSx	SINE/Alu	(3)	309	1	647090
668	25.3	11.2	0.0	chr11	47919019	47919200	(87167422)	+	MIRc	SINE/MIR	51	255	(13)	647091
248	19.1	0.0	0.0	chr11	48139291	48139337	(86947285)	C	MIRc	SINE/MIR	(139)	129	83	647643
11	17.2	3.8	7.3	chr11	62124145	62124197	(72962425)	+	G-rich	Low_complexity	1	55	(0)	661551
344	25.6	14.3	1.8	chr11	62124724	62124894	(72961728)	+	MIR	SINE/MIR	2	197	(65)	661552
223	23.0	14.7	5.4	chr11	62401337	62401428	(72685194)	+	L2c	LINE/L2	3286	3387	(0)	661991
264	32.9	10.4	3.1	chr11	65861461	65861615	(69225007)	+	MIRb	SINE/MIR	3	164	(104)	668312
295	22.2	11.0	2.8	chr11	65861786	65861891	(69224731)	C	MIR3	SINE/MIR	(41)	189	70	668313
309	31.8	12.5	0.0	chr11	66328573	66328698	(68757924)	C	L2a	LINE/L2	(2)	3424	3281	669254
298	27.8	3.5	2.6	chr11	66844441	66844552	(68242070)	+	MIR3	SINE/MIR	83	194	(68)	670371
184	29.3	0.0	0.0	chr11	67416850	67416890	(67669732)	+	L2b	LINE/L2	3310	3350	(25)	671607
431	29.9	0.9	0.0	chr11	67417009	67417115	(67669507)	C	L2a	LINE/L2	(5)	3421	3314	671608
708	21.9	1.3	0.0	chr11	67696398	67696552	(67390070)	C	MLT1F2	LTR/ERVL-MaLR	(6)	554	398	672114
279	28.9	0.0	5.3	chr11	67696555	67696649	(67389973)	+	MLT1F-int	LTR/ERVL-MaLR	1123	1212	(277)	672115
534	28.0	6.2	7.2	chr11	67696667	67697040	(67389582)	+	LTR52	LTR/ERVL	16	385	(36)	672116
505	32.0	7.9	0.8	chr11	68351737	68352301	(66734321)	C	L2a	LINE/L2	(159)	3267	2562	673258
218	34.6	15.2	0.0	chr11	69122219	69122374	(65964248)	+	MIRb	SINE/MIR	62	245	(23)	674547
384	33.2	4.0	0.0	chr11	69122320	69122509	(65964113)	C	MIRb	SINE/MIR	(1)	267	70	674548
1683	23.4	8.7	6.6	chr11	69289769	69290377	(65796245)	C	MLT1E3	LTR/ERVL-MaLR	(1)	623	1	674847
494	31.4	6.6	1.6	chr11	69290436	69290678	(65795944)	+	MIRb	SINE/MIR	5	260	(8)	674848
249	24.1	13.4	5.7	chr11	75473908	75474030	(59612592)	+	L2c	LINE/L2	3254	3387	(0)	686125
693	26.5	2.7	5.6	chr11	76218494	76218725	(58867897)	C	MIRc	SINE/MIR	(31)	237	13	687545
445	23.2	1.0	1.0	chr11	76219029	76219128	(58867494)	C	MIR3	SINE/MIR	(45)	163	64	687546
279	29.4	8.0	2.3	chr11	76219122	76219250	(58867372)	+	L2b	LINE/L2	3214	3350	(25)	687547
8963	24.0	4.0	4.5	chr11	85485431	85487872	(49598750)	+	L1M2	LINE/L1	358	3025	(4541)	703935
286	31.9	11.5	0.4	chr11	118087445	118087623	(16998999)	C	MIRb	SINE/MIR	(64)	198	1	752289
6161	24.8	12.9	0.7	chr12	39509328	39511107	(93764202)	+	L1M2b	LINE/L1	1	2030	(5179)	832571
56	0.0	2.0	0.0	chr12	52143914	52143964	(81131345)	+	(TG)n	Simple_repeat	1	52	(0)	852511
248	32.6	1.1	0.0	chr12	52144162	52144253	(81131056)	+	MIRb	SINE/MIR	95	187	(81)	852512
1432	22.4	7.1	3.0	chr12	130765879	130766241	(2509068)	+	L1MB5	LINE/L1	5783	6161	(13)	987171
296	18.4	9.6	9.6	chr12	133119968	133120165	(155144)	+	L1M5	LINE/L1	2732	2929	(3217)	990549
8161	20.8	4.6	5.9	chr14	67217748	67219530	(39824188)	C	L1M2c	LINE/L1	(5029)	2537	779	1195641
2247	13.8	0.0	0.0	chr14	71304273	71304583	(35739135)	+	AluSx	SINE/Alu	2	312	(0)	1202587
220	30.6	3.4	0.0	chr14	71305123	71305207	(35738511)	C	L2b	LINE/L2	(304)	3071	2984	1202588
270	32.6	7.7	10.6	chr14	75607497	75607750	(31435968)	+	MIRc	SINE/MIR	6	251	(17)	1210782
1674	18.5	1.7	0.7	chr14	75607791	75608082	(31435636)	+	AluJr4	SINE/Alu	1	295	(17)	1210783
225	31.6	2.5	1.2	chr15	40859100	40859179	(61132010)	+	L2a	LINE/L2	3335	3415	(11)	1292080
203	32.3	2.5	1.7	chr15	40859381	40859485	(61131704)	C	L2a	LINE/L2	(56)	3370	3243	1292081
303	23.0	15.5	0.0	chr15	45281946	45282032	(56709157)	C	MIR	SINE/MIR	(0)	262	160	1300376
410	30.6	4.9	6.1	chr15	45282154	45282476	(56708713)	+	LTR16D	LTR/ERVL	219	509	(59)	1300377
16	9.8	6.1	5.8	chr15	50182780	50182828	(51808361)	+	(TGTGGC)n	Simple_repeat	1	52	(0)	1307221
391	28.1	5.1	0.0	chr15	50183068	50183230	(51807959)	C	MIRb	SINE/MIR	(5)	263	88	1307222
2546	16.3	2.1	3.2	chr15	51052654	51053084	(50938105)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1308970
805	16.2	0.0	0.8	chr15	56345472	56345588	(45645601)	C	FLAM_A	SINE/Alu	(26)	116	1	1317006
237	37.2	5.5	4.9	chr15	71821651	71821814	(30169375)	C	L2b	LINE/L2	(175)	3212	3048	1344422
240	26.4	4.0	2.7	chr15	71821793	71821866	(30169323)	C	MIR3	SINE/MIR	(69)	139	65	1344423
13	16.7	0.0	5.3	chr15	75667191	75667228	(26323961)	+	G-rich	Low_complexity	1	38	(0)	1351341
692	21.5	3.8	3.3	chr15	98422223	98422405	(3568784)	C	MER5A	DNA/hAT-Charlie	(4)	185	2	1388617
1965	15.9	0.3	0.0	chr15	98846980	98847274	(3143915)	C	AluSz6	SINE/Alu	(15)	297	2	1389238
230	28.7	25.5	4.0	chr15	98847397	98847549	(3143640)	+	MIRb	SINE/MIR	6	191	(77)	1389239
320	17.5	3.2	1.0	chr15	101618047	101618126	(373063)	C	MIR	SINE/MIR	(58)	210	117	1393021
2472	8.9	0.0	0.0	chr16	66961551	66961863	(23376482)	C	AluSq2	SINE/Alu	(0)	313	1	1500765
15	8.7	0.0	0.0	chr17	1042162	1042233	(82215208)	+	(ACGG)n	Simple_repeat	1	72	(0)	1546250
1236	27.0	7.3	2.2	chr17	1042820	1043173	(82214268)	+	L1MB3	LINE/L1	5748	6131	(52)	1546251
693	27.6	4.2	1.4	chr17	18005598	18005821	(65251620)	C	MIR	SINE/MIR	(16)	246	16	1577767
1874	22.9	4.3	1.3	chr18	62688178	62688625	(17684660)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	1773880
260	23.6	19.1	0.0	chr18	62688628	62688784	(17684501)	C	L2a	LINE/L2	(183)	3243	3050	1773877
1233	13.0	5.2	0.0	chr19	14030378	14030577	(44587039)	+	AluSx1	SINE/Alu	1	211	(101)	1828389
247	30.7	8.4	0.9	chr19	15529921	15530035	(43087581)	C	L2c	LINE/L2	(220)	3155	3034	1832023
313	26.1	6.2	1.3	chr19	15530336	15530483	(43087133)	+	L2c	LINE/L2	3084	3252	(123)	1832024
2440	9.4	3.7	0.8	chr19	15530526	15530889	(43086727)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1832025
685	30.4	6.6	5.1	chr19	16463590	16464002	(42153614)	C	L2c	LINE/L2	(5)	3382	2961	1833978
387	32.8	10.6	3.6	chr19	37243723	37244047	(21373569)	C	L1M5	LINE/L1	(1097)	5049	4699	1864098
491	36.6	3.7	7.3	chr19	37485195	37485401	(21132215)	+	L2	LINE/L2	2584	2790	(629)	1864509
2228	10.9	0.0	4.7	chr19	37485402	37485722	(21131894)	C	AluSz6	SINE/Alu	(6)	306	1	1864510
382	29.1	5.5	3.4	chr19	49849776	49849953	(8767663)	+	L2	LINE/L2	2146	2327	(1092)	1892075
202	22.4	20.3	3.0	chr19	49850255	49850355	(8767261)	+	L2b	LINE/L2	3242	3364	(11)	1892076
881	33.6	2.4	1.9	chr19	56424285	56424703	(2192913)	+	L2	LINE/L2	2554	2974	(445)	1905774
272	29.4	13.8	0.0	chr2	102145739	102145881	(140047648)	+	MER5B	DNA/hAT-Charlie	8	173	(5)	2060704
229	27.1	6.8	1.0	chr2	102145947	102146043	(140047486)	C	L4_A_Mam	LINE/RTE-X	(265)	4725	4623	2060705
1362	26.4	14.9	2.9	chr2	102146260	102146945	(140046584)	C	MER20B	DNA/hAT-Charlie	(0)	783	1	2060706
4533	17.9	3.8	2.5	chr2	170910918	170911444	(71282085)	C	L1MB5	LINE/L1	(919)	5227	4702	2157460
1353	19.5	11.2	0.8	chr2	170911445	170911700	(71281829)	C	AluJo	SINE/Alu	(25)	287	2	2157463
4533	17.9	3.8	2.5	chr2	170911701	170911992	(71281537)	C	L1MB5	LINE/L1	(1445)	4701	4403	2157460
395	18.7	1.3	0.0	chr20	31851022	31851096	(32593071)	C	LTR45C	LTR/ERV1	(0)	539	464	2307010
337	32.6	9.8	3.3	chr20	33688338	33688518	(30755649)	C	MIR3	SINE/MIR	(9)	199	6	2311344
306	28.0	14.8	0.8	chr20	33688701	33688833	(30755334)	C	MIR	SINE/MIR	(6)	256	102	2311345
3968	16.7	3.7	6.5	chr20	62108994	62109744	(2334423)	+	L1M4	LINE/L1	4261	5001	(1145)	2368148
2530	6.2	0.0	0.7	chr20	62109751	62110054	(2334113)	+	AluYh3	SINE/Alu	3	304	(7)	2368151
1755	18.5	11.4	9.8	chr20	62110060	62110404	(2333763)	+	MSTA	LTR/ERVL-MaLR	1	387	(41)	2368152
1663	16.5	6.5	0.0	chr20	63702471	63702743	(741424)	+	AluJb	SINE/Alu	1	292	(20)	2369896
254	33.3	4.1	4.1	chr20	63702999	63703170	(740997)	+	ERV3-16A3_I-int	LTR/ERVL	2347	2518	(2708)	2369897
796	19.0	7.3	4.6	chr21	32300118	32300291	(14409692)	+	AluJr	SINE/Alu	1	179	(133)	2402983
94	34.3	2.3	6.1	chr21	32300293	32300924	(14409059)	+	(TATGTCA)n	Simple_repeat	1	846	(0)	2402984
496	25.2	1.4	1.4	chr21	43787469	43787609	(2922374)	+	MLT1C	LTR/ERVL-MaLR	42	182	(285)	2420805
344	26.8	12.7	0.6	chr21	45097899	45098071	(1611912)	+	L2	LINE/L2	2410	2606	(813)	2422517
399	24.6	19.7	2.8	chr21	45098540	45098719	(1611264)	+	MIR	SINE/MIR	24	241	(21)	2422520
61	31.4	4.2	4.0	chr3	16177927	16178306	(182117253)	+	(TG)n	Simple_repeat	1	396	(0)	2520075
472	21.1	1.0	3.7	chr3	16178336	16178443	(182117116)	+	MER81	DNA/hAT-Blackjack	2	106	(8)	2520076
807	20.6	5.2	2.0	chr3	194326487	194328036	(3967523)	+	(CA)n	Simple_repeat	1	1630	(0)	2780940
648	25.7	15.4	0.4	chr3	194328516	194328753	(3966806)	+	LTR16E1	LTR/ERVL	259	538	(0)	2780941
248	26.1	1.5	0.0	chr3	194387641	194387705	(3907854)	C	MIRc	SINE/MIR	(28)	240	175	2781040
326	25.2	15.0	1.5	chr3	194388139	194388351	(3907208)	+	MIRb	SINE/MIR	4	256	(12)	2781041
180	30.5	8.8	8.8	chr3	194881836	194882040	(3413519)	+	L2c	LINE/L2	3132	3336	(51)	2782019
757	11.9	16.3	1.2	chr3	194882286	194882446	(3413113)	C	MER53	DNA/hAT	(3)	190	1	2782020
268	17.0	7.7	1.8	chr3	196164562	196165339	(2130220)	+	(GT)n	Simple_repeat	1	838	(0)	2784386
651	23.5	4.8	2.2	chr3	197960679	197960861	(334698)	C	MER5A	DNA/hAT-Charlie	(1)	188	1	2787895
197	32.1	7.6	8.8	chr3	197960986	197961316	(334243)	+	L2c	LINE/L2	3051	3377	(10)	2787896
1581	22.1	12.7	0.8	chr4	7577971	7578372	(182636183)	+	MSTB2	LTR/ERVL-MaLR	1	457	(0)	2800344
9787	17.3	6.2	3.6	chr5	450272	453302	(181084957)	C	L1M4c	LINE/L1	(3229)	3153	25	3055435
418	32.2	6.1	0.0	chr5	883230	883428	(180654831)	+	MER33	DNA/hAT-Charlie	105	316	(8)	3055772
491	22.1	9.7	2.6	chr5	890783	890935	(180647324)	C	MER58C	DNA/hAT-Charlie	(3)	212	48	3055776
22	15.1	2.3	0.0	chr5	891673	891716	(180646543)	+	(CTT)n	Simple_repeat	1	45	(0)	3055777
13	33.0	0.0	0.0	chr5	944681	944733	(180593526)	+	(CTCCTA)n	Simple_repeat	1	53	(0)	3055817
556	27.1	3.7	0.0	chr5	945214	945368	(180592891)	C	Arthur1B	DNA/hAT-Tip100	(993)	232	72	3055818
798	22.7	11.4	0.0	chr5	1474763	1475004	(180063255)	C	Tigger1	DNA/TcMar-Tigger	(2031)	387	115	3056280
472	18.9	9.9	3.0	chr5	1475005	1475135	(180063124)	C	Tigger1	DNA/TcMar-Tigger	(2256)	162	22	3056281
116	43.6	1.3	0.4	chr5	4080326	4081039	(177457220)	+	(CA)n	Simple_repeat	1	723	(0)	3058981
1011	23.1	10.9	3.5	chr5	5664626	5664973	(175873286)	C	MER31B	LTR/ERV1	(0)	543	74	3060829
204	32.1	7.0	1.9	chr5	6759819	6759926	(174778333)	C	MIR3	SINE/MIR	(14)	194	81	3062261
239	29.9	6.1	0.0	chr5	6760346	6760452	(174777807)	C	MER113	DNA/hAT-Charlie	(402)	119	6	3062262
405	19.1	15.5	0.7	chr5	6760537	6760673	(174777586)	+	LTR83	LTR/ERVL	273	433	(347)	3062263
201	29.0	3.1	0.0	chr5	10251082	10251143	(171287116)	C	L2	LINE/L2	(345)	3074	3011	3066555
202	31.3	1.6	2.2	chr5	10330368	10330462	(171207797)	+	L2b	LINE/L2	3015	3111	(315)	3066714
1902	11.5	1.7	0.3	chr5	10444976	10445270	(171092989)	C	AluSz	SINE/Alu	(13)	299	1	3066902
1772	18.0	1.0	0.0	chr5	10445644	10445949	(171092310)	+	AluJo	SINE/Alu	1	309	(3)	3066903
306	28.7	9.8	1.3	chr5	10526130	10526288	(171011971)	+	MLT1L	LTR/ERVL-MaLR	308	481	(129)	3067068
2369	10.7	0.0	0.0	chr5	10526590	10526897	(171011362)	+	AluSx1	SINE/Alu	2	309	(3)	3067069
1703	23.1	4.5	3.0	chr5	10678000	10678459	(170859800)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	3067319
186	19.6	4.2	2.1	chr5	10689198	10689244	(170849015)	C	MIR3	SINE/MIR	(141)	67	20	3067327
180	28.4	12.0	0.0	chr5	10698157	10698237	(170840022)	+	MER5A	DNA/hAT-Charlie	2	93	(96)	3067338
23	0.0	0.0	0.0	chr5	10698283	10698307	(170839952)	+	(A)n	Simple_repeat	1	25	(0)	3067339
337	25.5	1.1	1.1	chr5	10701714	10701808	(170836451)	+	MER94	DNA/hAT-Blackjack	1	95	(39)	3067345
259	28.4	9.0	1.2	chr5	10702132	10702213	(170836046)	+	L2b	LINE/L2	3272	3360	(15)	3067346
254	31.5	1.8	1.8	chr5	11378109	11378221	(170160038)	+	LTR78	LTR/ERV1	388	500	(804)	3068213
1018	25.5	5.8	5.4	chr5	14255890	14256008	(167282251)	+	L1ME3E	LINE/L1	5906	6018	(224)	3072001
2278	16.4	5.7	0.8	chr5	14256009	14256408	(167281851)	C	MSTB	LTR/ERVL-MaLR	(5)	421	1	3072003
393	25.2	5.6	7.5	chr5	14256409	14256555	(167281704)	+	L1ME3E	LINE/L1	5955	6144	(98)	3072001
213	32.8	17.4	0.0	chr5	14731335	14731581	(166806678)	+	L3	LINE/CR1	2229	2527	(1572)	3072587
5489	18.7	8.0	1.7	chr5	17966637	17967636	(163570623)	C	LTR2752	LTR/ERV1	(0)	1263	196	3077455
7440	22.1	3.4	6.1	chr5	19819328	19822399	(161715860)	+	L1P4d	LINE/L1	2	3191	(3724)	3079848
18767	13.3	5.4	1.7	chr5	24022583	24029112	(157509147)	+	L1PB1	LINE/L1	1	6864	(3)	3085542
6536	21.7	12.0	1.4	chr5	26415903	26417466	(155120793)	C	MER52A	LTR/ERV1	(0)	1755	3	3088538
13195	19.6	5.8	3.1	chr5	29496718	29499681	(152038578)	C	L1PA13	LINE/L1	(3704)	3062	10	3092462
2327	7.5	0.4	0.0	chr5	32025244	32025523	(149512736)	+	AluSp	SINE/Alu	1	281	(32)	3096039
36	0.0	2.7	0.0	chr5	32025527	32025563	(149512696)	+	(AAAC)n	Simple_repeat	1	38	(0)	3096040
30	0.0	0.0	0.0	chr5	32025592	32025619	(149512640)	+	(T)n	Simple_repeat	1	28	(0)	3096041
1879	13.4	0.7	0.4	chr5	32025626	32025900	(149512359)	C	AluSq2	SINE/Alu	(37)	276	1	3096042
2018	14.4	0.0	0.3	chr5	32026139	32026437	(149511822)	C	AluJo	SINE/Alu	(14)	298	1	3096043
12258	22.9	4.2	2.9	chr5	33049027	33055088	(148483171)	+	L1M2a	LINE/L1	399	6374	(1185)	3097805
45631	6.3	0.6	1.2	chr5	37270061	37271528	(144266731)	C	HERVL-int	LTR/ERVL	(4191)	1463	1	3104123
25	15.8	3.3	3.2	chr5	140764959	140765018	(40773241)	+	(AT)n	Simple_repeat	1	62	(0)	3243226
5123	22.5	2.4	2.7	chr5	140765027	140765956	(40772303)	C	L1M4	LINE/L1	(3298)	3449	2448	3243217
2188	10.5	0.7	3.0	chr5	180258745	180259049	(1279210)	+	AluSx1	SINE/Alu	1	298	(14)	3312312
23	34.4	2.7	0.9	chr6	27401578	27401689	(143404290)	+	(CTTT)n	Simple_repeat	1	115	(0)	3356831
2580	6.6	0.0	0.0	chr7	6674512	6674815	(152671158)	+	AluY	SINE/Alu	1	304	(7)	3569920
2044	10.8	6.6	0.7	chr7	6675331	6675617	(152670356)	C	AluSx1	SINE/Alu	(7)	305	1	3569921
2416	8.6	0.0	0.7	chr7	55940120	55940423	(103405550)	C	AluSx3	SINE/Alu	(9)	302	1	3639546
225	30.6	12.9	7.5	chr7	92939609	92939820	(66406153)	+	MLT1N2	LTR/ERVL-MaLR	335	559	(3)	3694605
388	30.4	6.7	2.3	chr7	92939913	92940084	(66405889)	C	MLT1I	LTR/ERVL-MaLR	(191)	220	41	3694606
944	30.7	3.6	1.9	chr7	92940271	92940751	(66405222)	+	LTR16D	LTR/ERVL	113	647	(4)	3694607
18	17.6	0.0	0.0	chr7	100621210	100621243	(58724730)	+	(T)n	Simple_repeat	1	34	(0)	3706972
2424	8.1	0.0	0.0	chr7	100621245	100621553	(58724420)	C	AluSx1	SINE/Alu	(3)	309	1	3706973
315	33.0	3.3	5.4	chr8	99893205	99893422	(45245214)	C	MIRb	SINE/MIR	(48)	220	1	3935816
18955	14.7	2.3	0.8	chr8	124128949	124135471	(21003165)	+	L1PA15	LINE/L1	62	6685	(7)	3973152
346	30.3	1.8	0.0	chr8	127559775	127559883	(17578753)	C	MIRb	SINE/MIR	(118)	150	40	3979568
5268	7.0	3.3	0.1	chr8	140198080	140198748	(4939888)	+	LTR8	LTR/ERV1	1	691	(0)	4001520
229	28.8	3.3	2.6	chr8	140198749	140198830	(4939806)	+	L2c	LINE/L2	3207	3317	(70)	4001519
252	26.3	2.6	1.3	chr8	140198867	140198943	(4939693)	C	L2a	LINE/L2	(1)	3425	3348	4001521
30	40.4	0.0	1.2	chr8	142529194	142529356	(2609280)	+	(GT)n	Simple_repeat	1	163	(0)	4005011
1527	13.5	0.0	0.0	chr8	144707495	144707702	(430934)	+	AluSx	SINE/Alu	99	306	(6)	4007954
5448	13.9	11.8	0.6	chr9	120679958	120681514	(17713203)	C	L1M1	LINE/L1	(5206)	2359	629	4165479
550	30.9	4.3	1.8	chr9	120850827	120851053	(17543664)	C	MIRb	SINE/MIR	(0)	268	36	4165843
204	33.3	16.4	3.1	chr9	121286416	121286709	(17108008)	+	L2b	LINE/L2	2970	3310	(65)	4166674
472	26.2	17.8	0.5	chr9	121286786	121286956	(17107761)	+	MIRb	SINE/MIR	30	220	(48)	4166675
518	35.0	10.6	1.4	chr9	122350925	122351292	(16043425)	+	L2c	LINE/L2	2474	2879	(540)	4168875
383	28.9	6.9	10.8	chr9	122351405	122351454	(16043263)	+	MIR	SINE/MIR	2	50	(212)	4168876
664	28.9	14.4	7.2	chr9	124866737	124867141	(13527576)	+	L2a	LINE/L2	2651	3148	(278)	4173421
2266	10.4	0.7	0.0	chr9	124867142	124867439	(13527278)	C	AluSx	SINE/Alu	(12)	300	1	4173426
298	27.6	15.6	5.7	chr9	124867440	124867604	(13527113)	+	L2a	LINE/L2	3149	3344	(82)	4173421
197	32.2	5.7	2.9	chr9	126919766	126919947	(11474770)	C	L2a	LINE/L2	(71)	3355	3144	4177319
284	33.2	12.7	4.2	chr9	126919946	126920181	(11474536)	+	L2c	LINE/L2	3120	3378	(9)	4177320
197	24.1	4.9	6.5	chr9	126920277	126920338	(11474379)	C	L2b	LINE/L2	(5)	3421	3361	4177321
2231	10.5	0.3	0.3	chr9	127418503	127418807	(10975910)	C	AluSx	SINE/Alu	(4)	308	4	4178168
353	29.4	8.3	1.6	chr9	127478350	127478560	(10916157)	C	L1ME4b	LINE/L1	(384)	613	400	4178307
229	26.2	10.1	5.3	chr9	127478725	127478893	(10915824)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	4178308
331	32.9	10.1	4.6	chr9	127517275	127517652	(10877065)	+	L2a	LINE/L2	2993	3420	(6)	4178389
390	29.4	0.7	6.5	chr9	127518172	127518324	(10876393)	C	MIR	SINE/MIR	(66)	196	53	4178390
350	26.2	12.9	0.6	chr9	127559918	127560086	(10834631)	C	MIRc	SINE/MIR	(59)	209	17	4178489
264	29.9	0.0	0.0	chr9	127560121	127560197	(10834520)	+	L3	LINE/CR1	3935	4011	(88)	4178490
184	41.0	1.9	0.9	chr9	127560933	127561038	(10833679)	C	MIR	SINE/MIR	(124)	138	32	4178492
407	27.6	8.8	0.7	chr9	127561459	127561604	(10833113)	C	MIRb	SINE/MIR	(75)	193	35	4178493
202	34.7	6.9	0.0	chr9	127770405	127770499	(10624218)	C	MIR3	SINE/MIR	(25)	183	82	4178977
582	23.5	12.2	3.2	chr9	127770841	127771025	(10623692)	+	MIR	SINE/MIR	3	206	(62)	4178978
422	26.5	16.0	1.7	chr9	127931274	127931738	(10462979)	+	L2b	LINE/L2	2785	3332	(43)	4179361
1176	12.7	0.6	0.0	chr9	127931923	127932087	(10462630)	C	AluSz6	SINE/Alu	(13)	299	134	4179362
4029	15.5	4.2	0.7	chr9	129344685	129345425	(9049292)	+	L1MB3	LINE/L1	5401	6168	(15)	4182607
1808	12.6	7.4	1.4	chr9	129345469	129345761	(9048956)	C	AluJr	SINE/Alu	(0)	312	1	4182608
368	35.3	3.9	1.3	chr9	129345840	129345991	(9048726)	+	MIRb	SINE/MIR	92	247	(21)	4182609
199	30.6	4.5	0.0	chr9	129346064	129346148	(9048569)	C	MIR1_Amn	SINE/MIR	(57)	173	85	4182610
2381	9.6	0.0	0.0	chr9	129346343	129346645	(9048072)	C	AluSz	SINE/Alu	(9)	303	1	4182611
213	32.1	17.0	0.0	chr9	129628590	129628701	(8766016)	C	L2a	LINE/L2	(3)	3423	3289	4183284
377	34.0	4.9	7.3	chr9	129748854	129749107	(8645610)	C	L2c	LINE/L2	(3)	3384	3113	4183538
1218	18.1	5.5	0.9	chr9	129749110	129749319	(8645398)	+	AluJo	SINE/Alu	1	220	(92)	4183539
2105	12.8	0.7	1.3	chr9	129749367	129749670	(8645047)	+	AluJb	SINE/Alu	2	303	(9)	4183540
295	23.5	2.9	0.0	chr9	130141829	130141896	(8252821)	C	MER5A1	DNA/hAT-Charlie	(83)	83	14	4184395
2109	10.5	0.0	1.1	chr9	130459450	130459734	(7934983)	C	AluSz	SINE/Alu	(30)	282	1	4185055
1041	25.4	7.3	11.9	chr9	130459735	130459834	(7934883)	C	MLT1C	LTR/ERVL-MaLR	(370)	97	5	4185054
211	10.8	0.0	2.6	chr9	130460082	130460119	(7934598)	C	L3	LINE/CR1	(116)	3983	3947	4185056
192	22.2	0.0	0.0	chr9	130460561	130460614	(7934103)	C	L2	LINE/L2	(340)	3079	3026	4185057
551	25.8	5.0	0.0	chr9	130491980	130492111	(7902606)	+	MIR	SINE/MIR	90	228	(34)	4185115
287	38.3	0.9	0.9	chr9	130492189	130492304	(7902413)	+	MIR3	SINE/MIR	64	179	(29)	4185116
185	28.9	0.0	0.0	chr9	130492658	130492709	(7902008)	+	MIR1_Amn	SINE/MIR	106	157	(73)	4185117
500	30.7	1.8	1.2	chr9	130494000	130494167	(7900550)	+	MIR	SINE/MIR	54	222	(40)	4185121
262	22.2	3.1	3.7	chr9	130494298	130494398	(7900319)	C	MIR	SINE/MIR	(21)	187	87	4185122
201	29.0	8.0	0.0	chr9	130494483	130494551	(7900166)	+	L2b	LINE/L2	3240	3314	(61)	4185123
2010	8.9	5.0	3.4	chr9	130694720	130695012	(7699705)	C	AluSz	SINE/Alu	(14)	298	1	4185605
767	27.4	7.5	4.9	chr9	130695092	130695417	(7699300)	C	L2a	LINE/L2	(90)	3336	3002	4185606
946	22.4	10.9	1.4	chr9	131300020	131300300	(7094417)	C	MSTD	LTR/ERVL-MaLR	(1)	395	85	4186764
295	23.3	7.6	0.0	chr9	131423638	131423710	(6971007)	C	MER58C	DNA/hAT-Charlie	(10)	205	127	4187069
307	27.1	6.2	1.6	chr9	132587661	132587784	(5806933)	C	MIR3	SINE/MIR	(59)	149	20	4189193
307	25.7	13.7	2.6	chr9	133873241	133873356	(4521361)	+	MIR3	SINE/MIR	16	146	(62)	4191195
336	33.9	2.3	3.5	chr9	133873751	133873924	(4520793)	C	MIR3	SINE/MIR	(28)	180	9	4191196
1656	25.6	3.9	0.4	chr9	133875764	133876260	(4518457)	+	MLT2B1	LTR/ERVL	6	520	(0)	4191197
1103	11.5	1.9	0.6	chr9	134169439	134169595	(4225122)	C	AluSx	SINE/Alu	(17)	295	137	4191672
218	25.0	0.0	1.6	chr9	134474742	134474802	(3919915)	+	L2b	LINE/L2	3313	3372	(3)	4192052
812	22.7	4.0	2.9	chr9	135136899	135137143	(3257574)	+	MLT1D	LTR/ERVL-MaLR	27	274	(231)	4192809
193	32.5	15.3	2.4	chr9	136137062	136137231	(2257486)	C	MIRb	SINE/MIR	(51)	217	22	4194073
12	11.9	0.0	6.5	chr9	137027605	137027635	(1367082)	+	G-rich	Low_complexity	1	31	(0)	4195129
503	22.6	3.5	5.5	chrX	47413714	47414002	(108626893)	C	L1ME3Cz	LINE/L1	(808)	189	32	4434102