2298	24.6	5.5	4.4	chr1	1950635	1951023	(247005399)	C	L1ME1	LINE/L1	(844)	5335	4946	2653
1964	14.5	11.3	0.6	chr1	1951024	1951363	(247005059)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2655
2143	24.6	5.5	4.4	chr1	1951364	1951754	(247004668)	C	L1ME1	LINE/L1	(1201)	4945	4528	2653
2387	13.8	1.3	2.1	chr1	4757854	4758231	(244198191)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	5783
6469	17.6	3.3	4.8	chr1	5762808	5763356	(243193066)	C	L1MD1	LINE/L1	(1699)	4447	3929	7226
215	27.8	10.2	2.0	chr1	5763359	5763429	(243192993)	+	L2a	LINE/L2	3124	3193	(233)	7230
2737	10.3	1.1	0.5	chr1	5763430	5763801	(243192621)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	7231
215	27.8	10.2	2.0	chr1	5763802	5763828	(243192594)	+	L2a	LINE/L2	3194	3230	(196)	7230
2170	23.9	6.8	2.0	chr1	5777562	5777942	(243178480)	C	MLT1E1	LTR/ERVL-MaLR	(0)	654	252	7256
2824	9.2	1.3	0.3	chr1	5777943	5778313	(243178109)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	7257
243	25.9	5.3	1.1	chr1	7658366	7658455	(241297967)	+	MER5B	DNA/hAT-Charlie	6	99	(79)	10125
333	28.5	4.2	1.4	chr1	7658498	7658636	(241297786)	+	MIRb	SINE/MIR	22	164	(104)	10126
2209	9.3	0.0	1.0	chr1	8855846	8856158	(240100264)	C	AluSx	SINE/Alu	(1)	311	2	12405
2152	11.9	1.6	7.8	chr1	8856159	8856381	(240100041)	+	THE1C	LTR/ERVL-MaLR	170	375	(0)	12404
385	27.4	13.8	3.5	chr1	8856382	8856441	(240099981)	+	L1ME1	LINE/L1	6108	6167	(12)	12387
585	31.7	5.5	1.7	chr1	9428342	9428636	(239527786)	+	Tigger15a	DNA/TcMar-Tigger	6	312	(403)	13568
11881	10.2	1.5	0.6	chr1	12562609	12564223	(236392199)	+	MSTA-int	LTR/ERVL-MaLR	2	1631	(0)	19988
2221	12.8	11.7	2.6	chr1	12564226	12564611	(236391811)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	19988
12	19.5	5.9	3.7	chr1	13749182	13749232	(235207190)	+	(CCGG)n	Simple_repeat	1	54	(0)	21985
13	29.7	2.3	5.6	chr1	13749236	13749322	(235207100)	+	(CGC)n	Simple_repeat	1	89	(0)	21986
2561	10.3	0.8	1.6	chr1	15287308	15287683	(233668739)	C	THE1C	LTR/ERVL-MaLR	(0)	375	3	24937
13	16.9	0.0	0.0	chr1	16352430	16352456	(232603966)	+	(CGC)n	Simple_repeat	1	27	(0)	27273
17	23.9	3.1	4.5	chr1	16352475	16352538	(232603884)	+	(GC)n	Simple_repeat	1	66	(0)	27274
597	5.4	0.0	0.0	chr1	16727285	16727358	(232229064)	+	tRNA-Gly-GGG	tRNA	1	74	(0)	28015
2261	10.5	1.0	0.0	chr1	16728032	16728327	(232228095)	+	AluSz	SINE/Alu	1	299	(13)	28016
15	27.5	6.7	0.0	chr1	27155046	27155120	(221801302)	+	(GCTCCA)n	Simple_repeat	1	80	(0)	51051
310	31.2	6.9	4.3	chr1	28519028	28519305	(220437117)	C	L2b	LINE/L2	(161)	3214	2910	54412
2577	9.4	0.8	3.9	chr1	32504867	32505252	(216451170)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	63006
370	8.3	0.0	0.0	chr1	32505261	32505308	(216451114)	+	AluJo	SINE/Alu	254	301	(11)	63007
2324	19.0	13.8	10.3	chr1	32505309	32505605	(216450817)	+	L1ME1	LINE/L1	5324	5594	(585)	63008
2810	9.4	0.3	0.3	chr1	33502418	33502792	(215453630)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	65221
13	11.6	12.2	1.8	chr1	35883203	35883251	(213073171)	+	(CTGGCAG)n	Simple_repeat	1	55	(0)	69699
21	12.9	2.3	2.2	chr1	35883255	35883298	(213073124)	+	(GCG)n	Simple_repeat	1	45	(0)	69700
27	17.8	4.0	5.8	chr1	41242139	41242240	(207714182)	+	(GCGG)n	Simple_repeat	1	100	(0)	80410
2702	10.7	0.3	0.5	chr1	43486888	43487263	(205469159)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	84388
12	11.5	3.3	3.2	chr1	44417620	44417649	(204538773)	+	(CCTC)n	Simple_repeat	1	31	(0)	85980
483	26.8	17.6	2.3	chr1	46200202	46200503	(202755919)	+	L2b	LINE/L2	2229	2586	(833)	89535
342	28.6	1.2	0.0	chr1	46200515	46200598	(202755824)	+	L2b	LINE/L2	3282	3366	(9)	89535
348	31.6	6.9	8.2	chr1	47333318	47333668	(201622754)	+	L2a	LINE/L2	2989	3336	(39)	91367
19	12.1	0.0	2.6	chr1	47333870	47333907	(201622515)	+	(CCCGC)n	Simple_repeat	1	38	(0)	91369
7343	21.2	2.7	2.0	chr1	50806489	50807243	(198149179)	+	L1PA15	LINE/L1	1207	1966	(4819)	97468
2071	13.4	12.2	1.6	chr1	50807244	50807623	(198148799)	C	MSTA	LTR/ERVL-MaLR	(0)	428	3	97469
28	21.8	3.0	7.2	chr1	50968529	50968662	(197987760)	+	G-rich	Low_complexity	1	138	(0)	97721
6069	11.9	0.6	0.8	chr1	58945871	58946120	(190010302)	C	L1PA16	LINE/L1	(9)	6157	5911	113875
2120	14.7	3.7	1.3	chr1	58946121	58946492	(190009930)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	113876
10508	13.7	1.7	1.4	chr1	60966637	60967041	(187989381)	C	THE1C-int	LTR/ERVL-MaLR	(1226)	405	3	117419
2423	12.2	1.6	2.1	chr1	60967044	60967420	(187989002)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	117419
2832	8.0	3.2	0.8	chr1	63958990	63959355	(184997067)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	123019
781	29.8	10.8	6.7	chr1	63959356	63959390	(184997032)	C	MLT1J	LTR/ERVL-MaLR	(479)	33	4	123018
2364	10.9	4.5	0.8	chr1	64010634	64010994	(184945428)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	123119
2934	26.6	11.6	9.4	chr1	65237662	65237945	(183718477)	+	L1MC4	LINE/L1	1702	1974	(4241)	125388
2659	11.0	3.2	0.6	chr1	65237946	65238310	(183718112)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	125392
2592	8.9	1.1	2.1	chr1	67385119	67385497	(181570925)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	128745
2292	11.6	0.3	0.0	chr1	67530993	67531295	(181425127)	C	AluSz6	SINE/Alu	(8)	304	1	129073
2908	6.4	0.3	4.1	chr1	67531296	67531613	(181424809)	C	THE1C	LTR/ERVL-MaLR	(61)	314	1	129072
253	28.7	2.5	8.7	chr1	67531614	67531677	(181424745)	+	MER94	DNA/hAT-Blackjack	74	133	(1)	129071
2037	13.9	1.7	2.0	chr1	68035332	68035684	(180920738)	C	THE1D	LTR/ERVL-MaLR	(0)	381	30	130013
1824	14.2	11.8	1.4	chr1	68035685	68036042	(180920380)	+	MSTA	LTR/ERVL-MaLR	29	428	(0)	130014
2756	9.6	0.0	1.1	chr1	69728843	69729221	(179227201)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	132389
8108	15.8	3.2	3.2	chr1	69729227	69730801	(179225621)	C	THE1C-int	LTR/ERVL-MaLR	(6)	1574	1	132389
1944	13.6	12.2	7.2	chr1	70617018	70617422	(178339000)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	133718
255	27.4	7.7	8.4	chr1	70851612	70851816	(178104606)	+	L1ME3Cz	LINE/L1	5	213	(711)	134031
2290	15.0	0.5	0.8	chr1	70851817	70852192	(178104230)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	134032
242	27.4	7.7	8.4	chr1	70852193	70852261	(178104161)	+	L1ME3Cz	LINE/L1	214	277	(647)	134031
1126	27.4	7.1	4.6	chr1	70852273	70852792	(178103630)	+	L1ME3Cz	LINE/L1	344	877	(120)	134031
28	17.9	3.7	3.6	chr1	72282853	72282933	(176673489)	+	(GGC)n	Simple_repeat	1	84	(0)	136021
32	7.4	0.0	0.0	chr1	72282939	72282981	(176673441)	+	(CAG)n	Simple_repeat	1	43	(0)	136022
28	25.9	0.0	0.0	chr1	72283089	72283162	(176673260)	+	A-rich	Low_complexity	1	74	(0)	136023
2360	11.8	0.8	5.1	chr1	72685283	72685631	(176270791)	+	THE1C	LTR/ERVL-MaLR	1	333	(42)	136540
2502	8.5	0.0	0.3	chr1	72685632	72685936	(176270486)	C	AluY	SINE/Alu	(7)	304	1	136541
2193	11.6	5.6	2.8	chr1	74659964	74660327	(174296095)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	138970
2775	9.9	0.3	0.5	chr1	76097244	76097619	(172858803)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	140941
1399	28.3	4.6	4.2	chr1	76097620	76097914	(172858508)	C	L1ME3B	LINE/L1	(356)	5886	5586	140939
2297	13.8	4.1	4.1	chr1	76657392	76657808	(172298614)	+	MSTB	LTR/ERVL-MaLR	4	420	(6)	141746
2419	10.9	1.7	0.3	chr1	76658030	76658377	(172298045)	C	THE1C	LTR/ERVL-MaLR	(0)	375	23	141747
2156	11.6	11.5	0.8	chr1	78438689	78439069	(170517353)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	144588
2778	9.1	0.3	0.3	chr1	82143809	82144181	(166812241)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	149417
1715	11.0	5.5	3.8	chr1	82144182	82144262	(166812160)	+	L1MA5A	LINE/L1	6215	6297	(0)	149416
212	28.0	5.7	2.9	chr1	82349021	82349123	(166607299)	+	MIRb	SINE/MIR	152	257	(11)	149684
2417	11.3	1.3	1.1	chr1	82349190	82349563	(166606859)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	149685
10398	11.8	2.2	1.9	chr1	82349564	82351138	(166605284)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	149685
1677	16.2	14.9	1.9	chr1	82992698	82993068	(165963354)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	150572
2911	7.2	0.0	1.1	chr1	83889014	83889392	(165067030)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	151772
10822	11.8	2.0	0.4	chr1	86376886	86378486	(162577936)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	4	155517
2510	9.6	2.7	1.6	chr1	86558497	86558866	(162397556)	C	THE1C	LTR/ERVL-MaLR	(1)	374	1	155777
4313	9.4	6.2	4.8	chr1	86558867	86559163	(162397259)	C	L1PA14	LINE/L1	(4339)	3816	3528	155774
2364	9.2	0.3	0.0	chr1	93130296	93130588	(155825834)	+	AluSx	SINE/Alu	1	294	(18)	165769
1712	30.6	11.4	12.5	chr1	93130589	93132062	(155824360)	C	L2a	LINE/L2	(618)	2801	1390	165768
201	30.0	4.3	6.2	chr1	100037817	100037912	(148918510)	+	MIRb	SINE/MIR	96	189	(79)	175849
457	29.2	4.3	1.3	chr1	100132341	100132496	(148823926)	+	MIR3	SINE/MIR	20	180	(28)	176011
2173	12.7	11.3	1.1	chr1	101516695	101517076	(147439346)	C	MSTA	LTR/ERVL-MaLR	(0)	428	3	178141
3024	8.8	0.3	0.0	chr1	108005094	108005467	(140950955)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	186213
3716	13.8	3.8	2.0	chr1	108524116	108524686	(140431736)	C	L1P4	LINE/L1	(355)	5801	5221	186863
2398	13.6	0.3	0.5	chr1	108524687	108525062	(140431360)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	186864
3716	13.0	3.4	3.9	chr1	108525063	108525658	(140430764)	C	L1P4	LINE/L1	(926)	5220	4634	186863
2030	15.2	1.0	0.0	chr1	113522108	113522404	(135434018)	C	AluSz6	SINE/Alu	(12)	300	1	195139
2480	12.2	1.3	1.6	chr1	114762817	114763192	(134193230)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	197239
2048	13.0	11.7	1.8	chr1	115844375	115844711	(133111711)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	198787
1061	14.0	12.6	2.2	chr1	119641375	119641583	(129314839)	+	L1MC1	LINE/L1	5153	5401	(943)	204328
2770	9.4	1.1	0.0	chr1	119641584	119641954	(129314468)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	204329
1061	12.4	12.9	2.3	chr1	119641955	119642043	(129314379)	+	L1MC1	LINE/L1	5402	5493	(851)	204328
2921	13.9	2.6	0.2	chr1	119642044	119642526	(129313896)	+	L1MC1	LINE/L1	5820	6314	(19)	204328
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
220	35.0	4.6	1.0	chr1	155934888	155934991	(93021431)	C	L2c	LINE/L2	(50)	3337	3230	229138
19	23.8	0.0	0.0	chr1	156728593	156728641	(92227781)	+	(GCG)n	Simple_repeat	1	49	(0)	230643
657	24.4	3.7	0.5	chr1	157794030	157794214	(91162208)	+	L1ME2z	LINE/L1	5974	6164	(280)	232181
1205	11.9	0.0	0.0	chr1	157794286	157794462	(91161960)	+	THE1C	LTR/ERVL-MaLR	199	375	(0)	232191
238	35.2	6.7	2.3	chr1	157794478	157794605	(91161817)	+	L1MC	LINE/L1	5523	5656	(2226)	232192
2324	11.8	2.9	1.4	chr1	159384356	159384724	(89571698)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	234262
6837	21.1	1.2	0.8	chr1	159384725	159384781	(89571641)	+	MSTA-int	LTR/ERVL-MaLR	1596	1646	(5)	234261
642	0.0	0.0	0.0	chr1	161422093	161422164	(87534258)	C	tRNA-Glu-GAA	tRNA	(3)	72	1	237515
6644	8.0	2.8	2.5	chr1	161422259	161424316	(87532106)	+	SVA_D	Retroposon/SVA	14	1386	(0)	237516
12	20.2	2.9	0.0	chr1	161524527	161524560	(87431862)	+	(AGCTG)n	Simple_repeat	1	35	(0)	237664
2226	12.1	6.8	0.8	chr1	161754449	161754806	(87201616)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	238046
2377	8.8	1.0	0.0	chr1	162558896	162559190	(86397232)	C	AluSg	SINE/Alu	(11)	299	2	239379
1895	12.7	7.2	3.6	chr1	162559191	162559399	(86397023)	+	THE1C	LTR/ERVL-MaLR	161	375	(0)	239378
247	34.1	4.3	2.9	chr1	162559400	162559496	(86396926)	C	L1M2	LINE/L1	(1860)	4280	4187	239377
2860	8.8	0.0	0.3	chr1	168587090	168587465	(80368957)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	248608
2042	12.5	7.3	2.8	chr1	168978808	168979170	(79977252)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	249243
2475	10.5	1.1	2.4	chr1	174864348	174864727	(74091695)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	257802
6832	21.3	5.0	2.6	chr1	174900819	174901233	(74055189)	C	L1PA10	LINE/L1	(4545)	1808	1398	257886
2479	11.9	1.3	0.8	chr1	174901234	174901606	(74054816)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	257887
2736	10.4	0.3	0.8	chr1	175524972	175525348	(73431074)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	258817
340	21.1	0.0	1.4	chr1	176218057	176218128	(72738294)	+	L1MCa	LINE/L1	3	73	(6435)	259903
1119	20.2	0.4	3.4	chr1	176218159	176218369	(72738053)	+	MER8	DNA/TcMar-Tigger	10	218	(21)	259904
2127	10.7	6.6	1.1	chr1	176218370	176218729	(72737693)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	259905
1119	20.2	0.4	3.4	chr1	176218730	176218753	(72737669)	+	MER8	DNA/TcMar-Tigger	219	238	(1)	259904
2013	9.1	9.1	3.2	chr1	178764786	178765159	(70191263)	+	MSTA	LTR/ERVL-MaLR	1	398	(30)	263630
464	12.1	0.0	0.0	chr1	178765160	178765225	(70191197)	C	AluSz6	SINE/Alu	(17)	295	230	263631
1918	14.1	8.9	0.9	chr1	179211946	179212295	(69744127)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	264350
14	9.6	0.0	0.0	chr1	179882205	179882227	(69074195)	+	(TCC)n	Simple_repeat	1	23	(0)	265466
745	14.4	1.8	6.7	chr1	182134192	182134246	(66822176)	+	L1MB7	LINE/L1	5947	5996	(188)	268889
2472	12.1	1.1	1.6	chr1	182134247	182134623	(66821799)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	268890
745	14.4	1.8	6.7	chr1	182134624	182134745	(66821677)	+	L1MB7	LINE/L1	5997	6115	(69)	268889
56	30.0	0.0	0.0	chr1	185156495	185156656	(63799766)	+	G-rich	Low_complexity	1	162	(0)	273834
1612	22.3	8.5	4.0	chr1	186033933	186034404	(62922018)	+	MLT1D	LTR/ERVL-MaLR	5	499	(6)	275080
4474	10.3	2.0	4.0	chr1	186633330	186634034	(62322388)	+	LTR8	LTR/ERV1	1	691	(0)	275870
1627	19.9	8.7	3.9	chr1	186634035	186634341	(62322081)	C	MLT1C	LTR/ERVL-MaLR	(128)	339	7	275862
302	25.0	1.7	5.7	chr1	188086267	188086338	(60870084)	+	Charlie4a	DNA/hAT-Charlie	363	432	(76)	277847
2388	12.6	4.5	0.0	chr1	188086339	188086696	(60869726)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	277848
302	25.0	1.7	5.7	chr1	188086697	188086746	(60869676)	+	Charlie4a	DNA/hAT-Charlie	433	480	(28)	277847
519	26.4	0.7	0.8	chr1	188086790	188086930	(60869492)	C	FLAM_C	SINE/Alu	(91)	210	2	277849
2242	15.3	0.5	1.3	chr1	191759214	191759591	(57196831)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	282543
2134	14.1	10.5	1.3	chr1	192871557	192871944	(56084478)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	283992
1072	26.4	9.4	2.9	chr1	192871945	192872291	(56084131)	C	LTR16C	LTR/ERVL	(67)	422	42	283991
2325	11.1	1.3	8.4	chr1	193077297	193077700	(55878722)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	284315
1119	29.1	5.4	8.0	chr1	193844109	193844866	(55111556)	+	L1MEd	LINE/L1	4427	5160	(986)	285385
2446	9.1	6.4	0.8	chr1	193844867	193845220	(55111202)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	285386
8791	13.7	5.2	4.5	chr1	196738263	196739830	(52216592)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	289035
2353	13.9	0.5	0.8	chr1	196739831	196740200	(52216222)	C	THE1C	LTR/ERVL-MaLR	(0)	375	7	289035
1941	17.5	0.7	0.0	chr1	196955567	196955875	(52000547)	+	AluSz	SINE/Alu	1	311	(1)	289287
1823	14.7	5.2	5.0	chr1	196955876	196956183	(52000239)	C	THE1D	LTR/ERVL-MaLR	(64)	317	1	289286
2168	14.5	2.4	3.6	chr1	198009211	198009596	(50946826)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	290650
10088	11.6	4.9	0.5	chr1	198009597	198011107	(50945315)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	1	290650
14	3.5	6.1	5.7	chr1	200669442	200669474	(48286948)	+	(GGC)n	Simple_repeat	1	35	(0)	294759
19	7.3	0.0	0.0	chr1	200669893	200669921	(48286501)	+	(GGAGC)n	Simple_repeat	1	29	(0)	294760
14	10.0	2.8	5.4	chr1	200670033	200670068	(48286354)	+	G-rich	Low_complexity	1	37	(0)	294761
2429	12.9	0.8	3.9	chr1	203357122	203357508	(45598914)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	299461
2396	11.2	2.4	2.4	chr1	204914215	204914589	(44041833)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	302506
1770	24.8	8.9	6.2	chr1	204914590	204914996	(44041426)	+	L1ME4b	LINE/L1	111	567	(2210)	302505
377	28.9	8.3	5.1	chr1	205474764	205474892	(43481530)	+	LTR16C	LTR/ERVL	2	142	(347)	303508
2243	12.4	3.5	3.2	chr1	205474893	205475266	(43481156)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	303509
377	28.9	8.3	5.1	chr1	205475267	205475333	(43481089)	+	LTR16C	LTR/ERVL	143	205	(284)	303508
3178	13.0	6.7	3.5	chr1	205554397	205554971	(43401451)	+	L1MB7	LINE/L1	5590	6184	(0)	303672
904	31.8	7.7	7.0	chr1	205554972	205554989	(43401433)	C	L4_A_Mam	LINE/RTE-X	(101)	4889	4880	303671
2326	12.7	11.9	0.8	chr1	205554990	205555369	(43401053)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	303673
2229	10.3	4.0	5.3	chr1	214617901	214618280	(34338142)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	317986
2256	14.4	1.6	0.8	chr1	217817207	217817578	(31138844)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	322293
270	25.5	5.7	9.2	chr1	220248533	220248696	(28707726)	+	L1M5	LINE/L1	4544	4701	(1445)	325932
2280	8.9	7.2	1.1	chr1	220248700	220249051	(28707371)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	325933
9052	11.6	5.4	3.8	chr1	220249052	220250598	(28705824)	+	THE1C-int	LTR/ERVL-MaLR	1	1573	(7)	325933
1077	29.6	11.9	7.7	chr1	223442892	223443000	(25513422)	+	MER115	DNA/hAT-Tip100	5	116	(577)	330696
2570	9.0	1.3	1.6	chr1	223443001	223443372	(25513050)	+	THE1C	LTR/ERVL-MaLR	1	371	(4)	330697
1123	27.7	9.5	7.7	chr1	223443373	223443927	(25512495)	+	MER115	DNA/hAT-Tip100	117	659	(34)	330698
20254	13.4	2.9	0.6	chr1	225069105	225071601	(23884821)	C	L1PA12	LINE/L1	(1885)	5696	3165	333537
2519	10.8	3.7	1.1	chr1	225071602	225071966	(23884456)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	333539
9014	21.1	5.5	2.1	chr1	225071967	225073633	(23882789)	C	L1PA12	LINE/L1	(4439)	3164	1154	333537
2242	11.4	11.1	3.8	chr1	225774782	225775174	(23181248)	+	MSTA	LTR/ERVL-MaLR	3	427	(1)	334561
189	29.0	3.7	0.0	chr1	226703765	226703851	(22252571)	+	MIRc	SINE/MIR	56	152	(116)	336313
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
10723	9.5	5.4	0.7	chr1	229134168	229135671	(19820751)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	339742
2131	14.1	3.5	5.5	chr1	229135672	229136054	(19820368)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	339742
2191	15.2	1.8	1.1	chr1	230806564	230806941	(18149481)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	342446
11	16.4	5.9	0.0	chr1	230978233	230978266	(17978156)	+	(CTGCCAC)n	Simple_repeat	1	36	(0)	342717
14	17.5	0.0	6.8	chr1	230978359	230978402	(17978020)	+	(GGC)n	Simple_repeat	1	44	(0)	342718
18	18.6	3.3	4.8	chr1	230978506	230978565	(17977857)	+	(GCC)n	Simple_repeat	1	62	(0)	342719
13	21.0	0.0	4.8	chr1	230978606	230978647	(17977775)	+	(GCC)n	Simple_repeat	1	42	(0)	342719
15	17.6	0.0	0.0	chr1	230978633	230978664	(17977758)	+	(CTG)n	Simple_repeat	1	32	(0)	342720
29	21.2	3.6	1.2	chr1	230978735	230978817	(17977605)	+	(CAG)n	Simple_repeat	1	86	(0)	342721
12	13.9	0.0	0.0	chr1	231422196	231422219	(17534203)	+	(GCC)n	Simple_repeat	1	24	(0)	343472
18	20.7	1.6	4.8	chr1	231422324	231422384	(17534038)	+	G-rich	Low_complexity	1	62	(0)	343473
12	17.2	4.9	2.3	chr1	231422410	231422450	(17533972)	+	(CCTCGG)n	Simple_repeat	1	43	(0)	343474
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
2588	10.3	1.9	0.3	chr1	231498309	231498677	(17457745)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	343601
8062	12.9	2.1	1.5	chr1	231498678	231500000	(17456422)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	250	343601
2731	10.5	1.1	0.0	chr1	231614227	231614597	(17341825)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	343808
353	26.7	0.0	0.0	chr1	232344904	232344978	(16611444)	C	7SLRNA	srpRNA	(242)	78	4	344849
2289	12.4	9.6	0.8	chr1	232345031	232345420	(16611002)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	344850
20	30.9	0.0	0.0	chr1	233288805	233288864	(15667558)	+	(TT)n	Simple_repeat	1	60	(0)	346151
509	25.8	11.7	8.3	chr1	233332106	233332418	(15624004)	C	L2a	LINE/L2	(4)	3422	3098	346220
1878	13.0	3.5	0.3	chr1	233706901	233707200	(15249222)	C	THE1D	LTR/ERVL-MaLR	(0)	381	72	346788
473	34.0	4.9	8.4	chr1	233889870	233890343	(15066079)	C	L2c	LINE/L2	(2)	3385	2924	347049
2784	9.3	0.3	0.8	chr1	233890347	233890723	(15065699)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	347050
9766	11.5	3.9	0.8	chr1	233890724	233892255	(15064167)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	347050
13	18.8	0.0	0.0	chr1	234478558	234478588	(14477834)	+	(CCCGCC)n	Simple_repeat	1	31	(0)	347927
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
574	28.3	8.3	1.7	chr1	235164984	235165220	(13791202)	+	MER103C	DNA/hAT-Charlie	44	297	(0)	349164
2294	8.3	2.9	0.3	chr1	235165346	235165647	(13790775)	C	AluSq	SINE/Alu	(3)	310	1	349165
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
341	33.8	2.7	1.4	chr1	236604804	236604947	(12351475)	+	MIRb	SINE/MIR	8	153	(115)	351934
1976	14.9	3.3	1.7	chr1	238346464	238346825	(10609597)	C	THE1C	LTR/ERVL-MaLR	(0)	375	8	354566
2019	14.1	3.0	0.3	chr1	243832978	243833274	(5123148)	+	AluSx	SINE/Alu	1	305	(7)	363142
2028	13.1	6.0	3.2	chr1	243833275	243833602	(5122820)	C	THE1D	LTR/ERVL-MaLR	(39)	342	1	363143
15	23.9	4.1	0.0	chr1	244048208	244048256	(4908166)	+	(CGC)n	Simple_repeat	1	51	(0)	363518
15	13.1	2.0	8.0	chr1	244048243	244048291	(4908131)	+	(CCGCC)n	Simple_repeat	1	50	(0)	363519
18	0.0	0.0	0.0	chr1	247104643	247104662	(1851760)	+	(TA)n	Simple_repeat	1	20	(0)	368655
956	13.2	0.7	1.4	chr1	247104690	247104837	(1851585)	C	LTR8	LTR/ERV1	(0)	727	563	368656
404	10.7	0.0	0.0	chr1	247104817	247104872	(1851550)	C	AluSz6	SINE/Alu	(13)	299	244	368657
346	12.5	1.8	0.0	chr1	247104877	247104932	(1851490)	C	LTR8	LTR/ERV1	(115)	576	520	368656
797	14.8	7.8	0.7	chr1	247104905	247105047	(1851375)	C	MER4A1	LTR/ERV1	(6)	466	313	368658
20	27.1	2.1	4.0	chr10	3976246	3976263	(129821159)	+	(ATAG)n	Simple_repeat	1	19	(0)	375866
109	12.6	0.0	0.0	chr10	3976264	3976462	(129820960)	+	(GATG)n	Simple_repeat	1	199	(0)	375867
20	27.1	2.1	4.0	chr10	3976463	3976540	(129820882)	+	(ATAG)n	Simple_repeat	4	78	(0)	375868
408	24.4	3.9	3.3	chr10	14666027	14666160	(119131262)	C	L2a	LINE/L2	(6)	3420	3256	392838
2604	11.2	0.3	0.5	chr10	14666178	14666553	(119130869)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	392839
1726	15.8	0.0	0.7	chr10	16425866	16426137	(117371285)	C	AluJo	SINE/Alu	(16)	296	27	395792
355	27.6	16.2	4.8	chr10	16426157	16426194	(117371228)	+	MIRb	SINE/MIR	27	59	(209)	395793
2525	10.8	1.1	1.3	chr10	16426195	16426570	(117370852)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	395794
355	27.6	16.2	4.8	chr10	16426571	16426737	(117370685)	+	MIRb	SINE/MIR	60	260	(8)	395793
30	25.4	2.3	1.1	chr10	17257634	17257719	(116539703)	+	GA-rich	Low_complexity	1	88	(0)	397048
1702	19.0	0.0	0.7	chr10	17883985	17884268	(115913154)	C	AluJo	SINE/Alu	(30)	282	1	398197
2157	13.3	3.7	1.9	chr10	17884427	17884794	(115912628)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	398198
2338	23.5	3.5	3.2	chr10	19253684	19253825	(114543597)	C	L1ME1	LINE/L1	(89)	6090	5950	400325
1656	15.2	10.7	1.8	chr10	19253826	19254166	(114543256)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	400327
2338	23.5	3.5	3.2	chr10	19254167	19254604	(114542818)	C	L1ME1	LINE/L1	(230)	5949	5508	400325
1978	15.1	9.9	1.8	chr10	19612564	19612954	(114184468)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	400842
14	10.7	0.0	5.9	chr10	21527274	21527307	(112270115)	+	G-rich	Low_complexity	1	34	(0)	403873
14	11.7	2.3	6.8	chr10	22340648	22340690	(111456732)	+	G-rich	Low_complexity	1	44	(0)	405128
184	28.4	2.9	6.9	chr10	22776750	22776821	(111020601)	+	MIR1_Amn	SINE/MIR	85	153	(77)	405791
1874	12.5	12.2	9.2	chr10	22776844	22777257	(111020165)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	405792
2253	13.9	2.1	1.1	chr10	24792407	24792777	(109004645)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	409129
2316	16.1	3.8	1.4	chr10	24874739	24874771	(108922651)	C	L1MA6	LINE/L1	(4)	6296	6269	409299
2536	12.3	0.3	1.8	chr10	24874772	24875152	(108922270)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	409300
2316	16.1	3.8	1.4	chr10	24875153	24875559	(108921863)	C	L1MA6	LINE/L1	(32)	6268	5845	409299
1484	14.4	10.8	5.3	chr10	26037624	26037982	(107759440)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	411069
7657	19.5	7.7	1.0	chr10	26037983	26039021	(107758401)	C	L1M3	LINE/L1	(1275)	4865	3769	411070
2169	10.5	2.9	5.4	chr10	26700434	26700824	(107096598)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	412162
10097	9.6	9.0	0.8	chr10	26700825	26702320	(107095102)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	412162
2332	13.6	3.7	1.9	chr10	33599306	33599679	(100197743)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	423494
2125	14.3	5.1	0.8	chr10	36458522	36458880	(97338542)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	428035
2271	11.9	0.3	0.0	chr10	36458991	36459300	(97338122)	C	AluY	SINE/Alu	(0)	311	1	428036
1828	12.9	1.0	6.1	chr10	42782007	42782317	(91015105)	C	AluJo	SINE/Alu	(17)	295	1	432544
2070	14.2	0.5	4.6	chr10	47385461	47385851	(86411571)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	439117
9766	12.0	5.7	1.4	chr10	47386884	47387712	(86409710)	C	THE1C-int	LTR/ERVL-MaLR	(722)	909	3	439117
2095	14.2	2.1	4.7	chr10	47387715	47388097	(86409325)	C	THE1C	LTR/ERVL-MaLR	(0)	375	3	439119
745	26.4	5.7	3.9	chr10	47388098	47388303	(86409119)	C	Kanga1	DNA/TcMar-Tc2	(158)	1587	1374	439116
2667	27.2	7.7	1.3	chr10	49589460	49589492	(84207930)	C	L1M4c	LINE/L1	(2703)	3679	3644	442063
2233	10.0	10.8	1.8	chr10	49589493	49589879	(84207543)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	442064
3701	20.5	5.6	2.3	chr10	49589880	49591237	(84206185)	C	L1M4c	LINE/L1	(2739)	3643	2197	442063
2745	8.4	1.6	0.0	chr10	56819052	56819420	(76978002)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	451923
246	31.1	4.2	0.0	chr10	58384868	58384957	(75412465)	C	MER5A	DNA/hAT-Charlie	(36)	153	60	454064
1984	13.3	13.8	1.1	chr10	60928836	60929208	(72868214)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	457837
2619	8.8	2.7	1.1	chr10	62301112	62301480	(71495942)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	459864
199	10.3	13.3	0.0	chr10	63859462	63859500	(69937922)	+	Penelope1_Vert	LINE/Penelope	477	521	(566)	462522
2687	12.0	1.9	0.0	chr10	63859560	63859927	(69937495)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	462523
666	34.3	1.2	2.9	chr10	63859995	63860237	(69937185)	+	MIRb	SINE/MIR	9	247	(21)	462524
2161	15.6	1.9	1.1	chr10	64463618	64463993	(69333429)	C	THE1D	LTR/ERVL-MaLR	(2)	379	1	463436
9415	11.7	7.8	0.6	chr10	64463994	64465459	(69331963)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	1	463436
7733	13.6	3.1	2.0	chr10	65772097	65772814	(68024608)	+	HSMAR2	DNA/TcMar-Mariner	481	1192	(110)	465187
2482	12.3	0.5	0.8	chr10	65772815	65773190	(68024232)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	465189
7733	13.6	3.1	2.0	chr10	65773191	65773249	(68024173)	+	HSMAR2	DNA/TcMar-Mariner	1193	1246	(56)	465187
2344	9.5	1.6	1.0	chr10	65773250	65773554	(68023868)	C	AluSc	SINE/Alu	(0)	309	3	465190
2343	10.6	3.2	3.7	chr10	66473169	66473519	(67323903)	+	THE1D	LTR/ERVL-MaLR	3	354	(27)	466141
1159	19.2	5.5	3.5	chr10	70260935	70261068	(63536354)	C	MER8	DNA/TcMar-Tigger	(0)	239	113	473054
2374	11.3	3.2	2.4	chr10	70261069	70261440	(63535982)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	473055
1159	19.2	5.5	3.5	chr10	70261441	70261537	(63535885)	C	MER8	DNA/TcMar-Tigger	(127)	112	3	473054
2977	7.0	0.5	0.8	chr10	70912213	70912587	(62884835)	C	THE1C	LTR/ERVL-MaLR	(0)	375	2	474318
2403	8.4	0.0	0.0	chr10	71281343	71281638	(62515784)	C	AluSc8	SINE/Alu	(14)	297	2	474930
426	26.9	4.7	1.4	chr10	71281681	71281857	(62515565)	+	MIRb	SINE/MIR	60	252	(16)	474931
2392	11.5	2.7	2.1	chr10	75369278	75369650	(58427772)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	482990
1926	15.4	1.6	0.9	chr10	76165572	76165886	(57631536)	C	THE1C	LTR/ERVL-MaLR	(58)	317	1	484136
258	31.5	11.0	0.0	chr10	76165890	76166032	(57631390)	C	L2b	LINE/L2	(3)	3423	3240	484137
22643	6.5	0.7	0.7	chr10	78101290	78103109	(55694313)	+	L1PA7	LINE/L1	4644	6468	(1)	487163
1168	14.0	1.5	2.9	chr10	78103136	78103341	(55694081)	+	THE1C	LTR/ERVL-MaLR	171	373	(2)	487162
286	25.3	3.7	1.2	chr10	78103347	78103426	(55693996)	+	LTR78B	LTR/ERV1	372	453	(843)	487161
1922	15.3	3.6	0.3	chr10	78103469	78103762	(55693660)	+	AluJr	SINE/Alu	1	304	(8)	487166
2852	9.3	0.0	2.1	chr10	78897825	78898207	(54899215)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	488666
336	27.6	8.0	2.1	chr10	78898234	78898372	(54899050)	C	MIRc	SINE/MIR	(39)	229	88	488667
2805	10.3	1.9	0.0	chr10	80754278	80754645	(53042777)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	491710
2328	10.7	5.1	1.7	chr10	84219559	84219920	(49577502)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	496506
1847	14.0	14.7	1.9	chr10	86787615	86787986	(47009436)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	500149
2021	16.6	11.4	1.3	chr10	92622707	92623090	(41174332)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	509544
800	27.6	3.4	9.2	chr10	92623091	92623269	(41174153)	C	L1MD2	LINE/L1	(212)	6147	5962	509541
2227	13.4	2.1	1.9	chr10	92881678	92882050	(40915372)	+	THE1C	LTR/ERVL-MaLR	2	375	(0)	510074
13	21.8	2.7	0.0	chr10	95183860	95183896	(38613526)	+	(CGC)n	Simple_repeat	1	38	(0)	513856
12	24.2	3.5	3.4	chr10	95184025	95184081	(38613341)	+	(CAGGAG)n	Simple_repeat	1	59	(0)	513857
2087	16.5	2.2	2.5	chr10	96460306	96460435	(37336987)	+	MLT1A0	LTR/ERVL-MaLR	4	133	(232)	516000
2173	13.4	13.1	0.8	chr10	96460436	96460810	(37336612)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	516001
287	31.2	9.8	2.3	chr10	97400789	97400980	(36396442)	+	MIR3	SINE/MIR	1	197	(11)	517895
2487	10.3	4.0	1.4	chr10	97948711	97949075	(35848347)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	519065
2222	15.6	0.8	1.3	chr10	104301930	104302306	(29495116)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	530497
1935	13.4	7.8	2.3	chr10	107972190	107972541	(25824881)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	535985
7972	24.8	4.8	3.1	chr10	108718953	108721236	(25076186)	+	L1PA17	LINE/L1	280	2366	(4503)	537014
1776	17.4	14.0	0.8	chr10	108721237	108721607	(25075815)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	537015
2715	9.4	2.2	1.6	chr10	111964673	111965039	(21832383)	C	THE1C	LTR/ERVL-MaLR	(4)	371	3	541914
310	29.2	0.0	2.5	chr10	113680752	113680871	(20116551)	+	MIR	SINE/MIR	43	158	(50)	544718
12	24.2	3.5	3.4	chr10	118046682	118046695	(15750727)	+	(CTCCCT)n	Simple_repeat	1	57	(0)	551476
17	11.8	2.4	4.8	chr10	118046696	118046736	(15750686)	+	(CCT)n	Simple_repeat	1	42	(0)	551477
193	18.6	18.9	1.1	chr10	118047180	118047266	(15750156)	+	L2b	LINE/L2	3266	3371	(4)	551478
452	26.9	4.5	1.7	chr10	118047407	118047580	(15749842)	+	MIR3	SINE/MIR	7	185	(23)	551479
1531	18.6	0.3	2.0	chr10	119706213	119706514	(14090908)	+	MLT1B	LTR/ERVL-MaLR	1	297	(93)	554423
2461	11.4	1.4	0.3	chr10	119706508	119706869	(14090553)	+	THE1C	LTR/ERVL-MaLR	9	374	(1)	554424
394	23.2	2.1	0.0	chr10	119706870	119706964	(14090458)	+	MLT1B	LTR/ERVL-MaLR	294	390	(0)	554423
17	18.0	6.0	0.0	chr10	123135570	123135619	(10661803)	+	(GAGGCG)n	Simple_repeat	1	53	(0)	559848
2324	12.4	1.3	0.8	chr10	124314713	124315085	(9482337)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	561686
360	28.1	19.7	0.6	chr10	125578614	125579101	(8218321)	+	L2b	LINE/L2	2554	3156	(219)	563722
2229	15.2	1.6	1.3	chr10	125579157	125579529	(8217893)	C	THE1C	LTR/ERVL-MaLR	(1)	374	1	563723
2654	12.6	0.8	0.8	chr10	127559618	127559992	(6237430)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	566329
241	22.2	4.5	1.6	chr10	130214765	130214828	(3582594)	+	MER5B	DNA/hAT-Charlie	5	70	(108)	569265
321	22.9	5.4	3.7	chr10	130215148	130215256	(3582166)	+	MER5A	DNA/hAT-Charlie	49	159	(30)	569266
2461	13.9	2.1	0.3	chr10	131782919	131783292	(2014130)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	570930
32	19.1	5.5	3.5	chr10	131783293	131783347	(2014075)	+	(ATAG)n	Simple_repeat	4	60	(0)	570931
946	12.8	0.0	0.8	chr10	131783349	131783481	(2013941)	+	AluSz	SINE/Alu	1	132	(180)	570932
2195	10.8	2.6	10.6	chr10	133118358	133118772	(678650)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	572175
852	15.3	8.8	3.8	chr10	133118773	133118856	(678566)	+	Tigger1	DNA/TcMar-Tigger	2320	2415	(3)	572174
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
315	32.2	9.5	1.5	chr11	208146	208419	(134878203)	+	L2b	LINE/L2	3021	3315	(60)	573081
13	23.6	4.8	3.0	chr11	554917	554979	(134531643)	+	(GCCCGC)n	Simple_repeat	1	66	(0)	573556
17	29.6	0.0	2.9	chr11	6611930	6611998	(128474624)	+	(CCCCG)n	Simple_repeat	1	69	(0)	581578
5619	17.2	7.5	4.6	chr11	9171908	9172427	(125914195)	+	L1MEc	LINE/L1	1026	1555	(4845)	585131
2053	13.6	7.3	2.5	chr11	9172428	9172781	(125913841)	+	THE1C	LTR/ERVL-MaLR	1	372	(3)	585133
2219	14.9	8.9	0.8	chr11	12057238	12057629	(123028993)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	590152
465	28.6	4.1	3.7	chr11	14855769	14855968	(120230654)	+	L1MEd	LINE/L1	1482	1755	(752)	594583
1954	14.1	5.1	3.0	chr11	14855987	14856351	(120230271)	+	THE1D	LTR/ERVL-MaLR	1	373	(8)	594587
2050	15.0	0.0	0.0	chr11	16506783	16507068	(118579554)	+	AluSz	SINE/Alu	2	287	(25)	597112
1711	15.1	11.9	11.7	chr11	16507069	16507324	(118579298)	+	MSTA	LTR/ERVL-MaLR	196	428	(0)	597111
5138	14.0	7.0	2.5	chr11	16507329	16508973	(118577649)	+	L1MA4A	LINE/L1	5972	7714	(8)	597108
9065	14.1	3.7	4.4	chr11	26370447	26372038	(108714584)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	612373
2516	10.3	1.9	1.6	chr11	26372039	26372412	(108714210)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	612373
2304	12.0	4.3	3.8	chr11	26933173	26933545	(108153077)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	613170
2887	19.1	5.7	1.7	chr11	30369008	30369155	(104717467)	C	L1MC4a	LINE/L1	(1)	7881	7720	618356
2453	12.3	1.3	0.5	chr11	30369156	30369531	(104717091)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	618357
2491	13.4	0.5	0.3	chr11	30601176	30601549	(104485073)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	618718
9829	11.2	3.7	5.0	chr11	31493527	31494647	(103591975)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	466	620039
17	26.8	3.8	2.4	chr11	34052227	34052305	(101034317)	+	(GCGCCC)n	Simple_repeat	1	82	(0)	624603
23	26.6	3.5	1.1	chr11	34358179	34358265	(100728357)	+	G-rich	Low_complexity	1	90	(0)	625129
2755	8.4	1.1	1.1	chr11	43215539	43215913	(91870709)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	638080
2379	8.3	7.2	1.1	chr11	43521066	43521417	(91565205)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	638602
2495	13.9	0.3	1.3	chr11	44715045	44715423	(90371199)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	640681
12	17.7	5.0	2.4	chr11	61509041	61509080	(73577542)	+	(GCA)n	Simple_repeat	1	42	(0)	660335
221	35.4	11.4	2.4	chr11	62680986	62681252	(72405370)	+	L2b	LINE/L2	2998	3303	(84)	662557
20	8.1	2.3	4.5	chr11	63671527	63671569	(71415053)	+	(CGAGG)n	Simple_repeat	1	44	(0)	664137
2279	7.7	1.3	0.7	chr11	63672115	63672413	(71414209)	+	AluSp	SINE/Alu	1	301	(12)	664138
2512	10.8	0.8	0.0	chr11	64390258	64390629	(70695993)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	665530
2423	12.7	7.7	0.8	chr11	65242382	65242779	(69843843)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	667143
2419	11.0	3.2	1.6	chr11	66741120	66741488	(68345134)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	670136
2135	16.1	1.1	2.4	chr11	68229442	68229648	(66856974)	C	L1M4c	LINE/L1	(4014)	2370	2170	673012
2855	8.8	0.0	1.3	chr11	68229649	68230028	(66856594)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	673013
2135	16.1	1.1	2.4	chr11	68230029	68230272	(66856350)	C	L1M4c	LINE/L1	(4215)	2169	1925	673012
2161	11.6	5.2	0.6	chr11	69256117	69256479	(65830143)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	674790
1229	19.7	11.5	9.9	chr11	69256602	69257064	(65829558)	+	MLT1D	LTR/ERVL-MaLR	35	505	(0)	674791
14	9.0	4.9	7.0	chr11	69642967	69643007	(65443615)	+	(GCG)n	Simple_repeat	1	43	(0)	675427
208	30.9	17.5	1.6	chr11	70534068	70534097	(64552525)	C	MIRb	SINE/MIR	(32)	236	205	676972
2990	8.3	0.0	0.3	chr11	70534098	70534473	(64552149)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	676973
223	30.0	10.3	0.9	chr11	70534474	70534633	(64551989)	C	MIR3	SINE/MIR	(64)	204	5	676972
203	23.7	21.2	0.0	chr11	72079957	72080049	(63006573)	+	MIRb	SINE/MIR	83	200	(68)	679309
42	0.0	0.0	0.0	chr11	72183917	72183952	(62902670)	+	(TG)n	Simple_repeat	1	36	(0)	679496
1294	16.5	0.4	4.7	chr11	72183953	72184188	(62902434)	C	AluJb	SINE/Alu	(33)	279	54	679497
2051	11.1	13.6	0.8	chr11	74440515	74440886	(60645736)	+	MSTA	LTR/ERVL-MaLR	1	427	(1)	684072
17	11.6	0.0	0.0	chr11	76446050	76446078	(58640544)	+	(TCAT)n	Simple_repeat	1	29	(0)	688050
2363	14.9	0.8	0.0	chr11	84329295	84329662	(50756960)	+	THE1C	LTR/ERVL-MaLR	1	371	(4)	702135
238	29.4	0.3	0.9	chr11	84329663	84329721	(50756901)	+	MIR3	SINE/MIR	49	107	(161)	702134
1810	12.1	6.6	4.8	chr11	86376318	86376691	(48709931)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	705461
5638	14.3	4.9	1.9	chr11	86376692	86378222	(48708400)	C	L1MC1	LINE/L1	(61)	6447	4881	705460
2104	11.0	10.5	8.8	chr11	93767193	93767434	(41319188)	+	MSTA	LTR/ERVL-MaLR	1	254	(174)	716130
2554	6.7	0.0	0.0	chr11	93767435	93767717	(41318905)	+	AluY	SINE/Alu	9	291	(20)	716131
1894	15.1	4.8	0.8	chr11	100184823	100185182	(34901440)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	724752
210	30.0	8.0	1.2	chr11	100185200	100185280	(34901342)	+	MIR3	SINE/MIR	97	183	(25)	724753
2214	15.1	1.3	2.4	chr11	101769152	101769530	(33317092)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	726834
2086	14.9	5.0	0.6	chr11	103375930	103376293	(31710329)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	729365
2769	10.1	0.0	0.8	chr11	118017656	118018033	(17068589)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	752153
1151	22.3	10.5	2.0	chr11	118018034	118018414	(17068208)	C	L2a	LINE/L2	(313)	3113	2704	752152
1932	17.4	8.4	3.0	chr11	123342666	123342864	(11743758)	+	MSTC	LTR/ERVL-MaLR	1	224	(204)	761357
2266	10.5	13.3	1.1	chr11	123342865	123343239	(11743383)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	761358
1932	17.4	8.4	3.0	chr11	123343240	123343443	(11743179)	+	MSTC	LTR/ERVL-MaLR	225	428	(0)	761357
12	25.6	0.0	0.0	chr11	124876298	124876334	(10210288)	+	G-rich	Low_complexity	1	37	(0)	763704
17	13.0	7.1	0.0	chr11	128522439	128522480	(6564142)	+	G-rich	Low_complexity	1	45	(0)	769017
181	12.9	13.9	11.4	chr11	134868794	134868863	(217759)	+	MamRTE1	LINE/RTE-BovB	2370	2441	(1371)	777755
928	26.9	5.6	8.4	chr11	134868968	134869799	(216823)	C	L1MEc	LINE/L1	(1066)	5875	5111	777756
1921	15.7	21.1	1.1	chr11	135075695	135076563	(10059)	+	TAR1	Satellite/telo	1	1042	(938)	778016
66	0.0	0.0	0.0	chr11	135076564	135076622	(10000)	+	(GTTAGG)n	Simple_repeat	1	59	(0)	778017
2462	6.0	0.0	0.3	chr12	950290	950587	(132324722)	+	AluYm1	SINE/Alu	1	297	(14)	779754
2359	11.4	8.0	0.8	chr12	1198588	1198967	(132076342)	C	MSTA	LTR/ERVL-MaLR	(0)	428	19	780281
625	13.1	2.2	0.2	chr12	1198947	1199059	(132076250)	C	MSTA	LTR/ERVL-MaLR	(242)	133	11	780281
649	10.8	2.2	0.2	chr12	1199034	1199146	(132076163)	C	MSTA	LTR/ERVL-MaLR	(242)	133	11	780281
1707	12.1	10.5	1.2	chr12	1551010	1551328	(131723981)	+	MSTA	LTR/ERVL-MaLR	3	354	(74)	780850
1098	23.9	8.6	1.1	chr12	1551359	1551713	(131723596)	C	Kanga1c	DNA/TcMar-Tc2	(267)	462	79	780849
29	0.0	0.0	0.0	chr12	1594157	1594183	(131681126)	+	(GCC)n	Simple_repeat	1	27	(0)	780919
20	16.2	5.3	1.7	chr12	1594484	1594540	(131680769)	+	G-rich	Low_complexity	1	60	(0)	780920
2398	11.7	8.2	1.0	chr12	3781695	3782091	(129493218)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	784407
278	32.2	6.4	4.2	chr12	9679906	9679995	(123595314)	C	L1ME3B	LINE/L1	(17)	6225	6135	794173
2474	13.4	0.8	0.0	chr12	9679996	9680367	(123594942)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	794174
1292	15.1	9.4	1.1	chr12	10687214	10687486	(122587823)	+	THE1D	LTR/ERVL-MaLR	1	298	(83)	795540
2474	11.4	4.6	4.6	chr12	10687487	10687941	(122587368)	+	THE1C	LTR/ERVL-MaLR	1	428	(0)	795541
1024	14.5	1.6	0.6	chr12	10687942	10688121	(122587188)	+	THE1C-int	LTR/ERVL-MaLR	1	182	(1449)	795541
14	15.8	4.3	4.2	chr12	13101148	13101193	(120174116)	+	G-rich	Low_complexity	1	48	(0)	799372
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
2613	11.3	1.1	0.3	chr12	21587326	21587697	(111687612)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	810975
4640	15.7	0.6	2.5	chr12	21587698	21587722	(111687587)	+	L1PB4	LINE/L1	6133	6152	(4)	810974
2810	9.1	0.5	0.0	chr12	21810372	21810744	(111464565)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	811247
3738	27.9	5.8	3.1	chr12	23173753	23174076	(110101233)	+	MLT1H-int	LTR/ERVL-MaLR	1	329	(1080)	813255
2209	12.1	5.3	1.4	chr12	23174077	23174436	(110100873)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	813256
3738	27.9	5.8	3.1	chr12	23174437	23175478	(110099831)	+	MLT1H-int	LTR/ERVL-MaLR	330	1407	(2)	813255
1966	23.9	7.9	2.8	chr12	28398167	28399008	(104876301)	C	L1ME1	LINE/L1	(162)	6017	5133	821007
611	14.4	4.0	0.0	chr12	28399013	28399109	(104876200)	C	THE1C	LTR/ERVL-MaLR	(2)	379	279	821008
2387	9.3	7.8	0.0	chr12	28399112	28399455	(104875854)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	821009
2252	15.0	1.6	2.1	chr12	31894571	31894945	(101380364)	C	THE1C	LTR/ERVL-MaLR	(0)	375	3	826306
270	9.5	0.0	0.0	chr12	31894948	31894989	(101380320)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1539	826306
2002	11.7	0.7	0.7	chr12	31894990	31895305	(101380004)	C	AluSx	SINE/Alu	(0)	312	1	826307
1419	19.4	9.7	5.0	chr12	38812217	38812283	(94463026)	+	MLT1A1	LTR/ERVL-MaLR	3	74	(334)	831570
2566	9.3	2.9	1.4	chr12	38812284	38812652	(94462657)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	831571
1419	19.4	9.7	5.0	chr12	38812653	38812968	(94462341)	+	MLT1A1	LTR/ERVL-MaLR	75	406	(2)	831570
2100	13.4	12.8	0.8	chr12	41351391	41351766	(91923543)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	834944
697	20.9	0.0	0.9	chr12	41351865	41351979	(91923330)	+	FLAM_A	SINE/Alu	2	115	(27)	834945
18	19.6	1.7	5.1	chr12	42144639	42144696	(91130613)	+	(CGC)n	Simple_repeat	1	59	(0)	836071
13	5.2	0.0	0.0	chr12	42144751	42144770	(91130539)	+	(CCG)n	Simple_repeat	1	20	(0)	836072
561	27.6	6.0	0.3	chr12	42145087	42145286	(91130023)	+	MIRb	SINE/MIR	6	221	(47)	836073
1843	19.5	0.0	0.3	chr12	43343600	43343907	(89931402)	C	AluJo	SINE/Alu	(5)	307	1	837972
2599	12.3	0.3	0.8	chr12	43343961	43344337	(89930972)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	837973
10806	14.0	1.5	0.2	chr12	43344338	43345946	(89929363)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	837973
2483	11.1	1.3	0.5	chr12	44213534	44213905	(89061404)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	839156
2336	8.4	3.2	2.9	chr12	45024059	45024402	(88250907)	+	THE1C	LTR/ERVL-MaLR	31	375	(0)	840210
2649	10.5	0.5	0.0	chr12	45068040	45068412	(88206897)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	840261
10528	11.9	2.9	1.3	chr12	45068413	45069714	(88205595)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	255	840261
2545	11.1	1.6	0.0	chr12	45885579	45885947	(87389362)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	841541
7018	11.7	3.2	3.6	chr12	45885948	45887049	(87388260)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	484	841541
1743	15.7	0.3	1.0	chr12	46330415	46330723	(86944586)	C	Tigger3b	DNA/TcMar-Tigger	(1)	1230	924	842111
2174	13.4	2.4	1.6	chr12	46330726	46331096	(86944213)	C	THE1C	LTR/ERVL-MaLR	(1)	374	1	842112
4642	14.2	4.7	1.7	chr12	46331097	46331309	(86944000)	C	Tigger3b	DNA/TcMar-Tigger	(304)	927	710	842111
2430	11.2	2.4	0.5	chr12	47516026	47516393	(85758916)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	843802
6665	12.3	0.8	0.3	chr12	47516394	47517395	(85757914)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	625	843802
274	16.7	2.0	0.0	chr12	49741082	49741129	(83534180)	C	Arthur1C	DNA/hAT-Tip100	(313)	50	2	847714
437	38.2	5.8	3.8	chr12	57123774	57124195	(76151114)	+	L2c	LINE/L2	2956	3386	(1)	860738
302	34.8	7.6	2.5	chr12	57124220	57124381	(76150928)	+	MIRb	SINE/MIR	95	265	(3)	860751
2241	14.3	1.1	1.9	chr12	59611136	59611513	(73663796)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	864320
1131	15.9	1.6	0.0	chr12	60999812	61000000	(72275309)	C	THE1C	LTR/ERVL-MaLR	(0)	375	184	866014
974	18.6	0.5	2.7	chr12	61000001	61000188	(72275121)	C	THE1C	LTR/ERVL-MaLR	(191)	184	1	866015
328	29.0	8.4	0.8	chr12	65570181	65570312	(67704997)	C	L1ME3B	LINE/L1	(38)	6204	6062	872984
408	22.2	13.8	4.9	chr12	65570314	65570331	(67704978)	C	L1ME3B	LINE/L1	(210)	6032	6016	872984
2363	11.3	2.1	3.9	chr12	65570332	65570719	(67704590)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	872985
408	22.2	13.8	4.9	chr12	65570720	65570904	(67704405)	C	L1ME3B	LINE/L1	(227)	6015	5808	872984
2491	6.7	0.0	0.7	chr12	66170196	66170494	(67104815)	C	AluSc8	SINE/Alu	(14)	297	1	873920
695	20.9	3.3	0.7	chr12	67629004	67629151	(65646158)	+	AluJr	SINE/Alu	158	309	(3)	876194
1939	27.2	8.7	3.8	chr12	67629152	67629836	(65645473)	C	L2a	LINE/L2	(288)	3138	2401	876193
2626	12.0	0.3	0.0	chr12	72194905	72195278	(61080031)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	883508
7022	9.9	3.8	0.8	chr12	72195279	72196595	(61078714)	C	L1PA16	LINE/L1	(544)	5622	4285	883507
397	29.0	9.1	5.6	chr12	75221704	75221842	(58053467)	C	MLT1G	LTR/ERVL-MaLR	(13)	578	432	887255
2198	13.3	3.7	1.4	chr12	75221843	75222208	(58053101)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	887257
397	32.0	6.6	1.4	chr12	75222209	75222417	(58052892)	C	MLT1G	LTR/ERVL-MaLR	(160)	431	155	887255
2455	11.4	1.1	1.6	chr12	80577167	80577541	(52697768)	C	THE1C	LTR/ERVL-MaLR	(0)	375	3	895178
2181	15.9	0.8	1.3	chr12	84850649	84851025	(48424284)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	900838
2576	9.2	1.3	2.4	chr12	88358797	88359175	(44916134)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	905411
1354	17.4	11.7	1.0	chr12	88791137	88791433	(44483876)	C	MSTA	LTR/ERVL-MaLR	(2)	426	94	905994
2282	11.5	4.8	1.6	chr12	88791434	88791796	(44483513)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	905995
3833	12.7	6.4	0.3	chr12	88791799	88792413	(44482896)	+	THE1C-int	LTR/ERVL-MaLR	3	657	(923)	905995
2685	10.2	0.5	1.3	chr12	89716672	89717049	(43558260)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	907483
207	17.8	0.0	8.2	chr12	89717070	89717118	(43558191)	+	L2a	LINE/L2	3381	3425	(1)	907484
405	33.6	5.3	5.3	chr12	90647308	90647398	(42627911)	C	Tigger20a	DNA/TcMar-Tigger	(5)	968	879	908839
2284	12.6	4.5	0.0	chr12	90647399	90647756	(42627553)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	908840
405	33.6	5.3	5.3	chr12	90647757	90648060	(42627249)	C	Tigger20a	DNA/TcMar-Tigger	(95)	878	573	908839
2240	11.0	2.7	3.2	chr12	91453168	91453544	(41821765)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	909969
251	30.8	0.0	12.2	chr12	91453545	91453660	(41821649)	+	L2c	LINE/L2	3274	3372	(15)	909967
2644	11.3	0.8	0.4	chr12	92697321	92697696	(40577613)	+	THE1C	LTR/ERVL-MaLR	1	426	(0)	911977
598	31.5	6.6	7.2	chr12	92697806	92698277	(40577032)	C	MLT1K	LTR/ERVL-MaLR	(2)	593	125	911978
2297	12.0	6.9	0.8	chr12	93788101	93788452	(39486857)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	914124
5728	7.9	2.4	2.5	chr12	96854799	96854911	(36420398)	C	L1PA14	LINE/L1	(1)	6160	6049	919784
2428	12.5	2.1	0.5	chr12	96854912	96855280	(36420029)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	919785
2378	11.8	2.9	0.3	chr12	99675937	99676301	(33599008)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	924210
2643	10.8	0.8	0.0	chr12	100686464	100686833	(32588476)	C	THE1C	LTR/ERVL-MaLR	(0)	375	3	926010
15	14.8	1.9	7.5	chr12	101877701	101877752	(31397557)	+	(GCGCCCG)n	Simple_repeat	1	53	(0)	928161
13	5.2	0.0	0.0	chr12	101877768	101877787	(31397522)	+	(CGG)n	Simple_repeat	1	20	(0)	928162
2759	7.8	0.3	3.9	chr12	105398347	105398735	(27876574)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	934294
1315	23.3	14.0	1.4	chr12	106554458	106554657	(26720652)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	282	936403
2502	12.0	8.4	3.0	chr12	106554658	106555061	(26720248)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	936404
1728	8.2	0.0	0.4	chr12	106949330	106949563	(26325746)	C	THE1C	LTR/ERVL-MaLR	(142)	233	1	937142
2521	12.4	7.7	0.8	chr12	109561973	109562370	(23712939)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	942741
1756	17.7	0.3	2.3	chr12	109801167	109801263	(23474046)	+	AluJr	SINE/Alu	2	98	(214)	943332
2777	9.9	0.3	0.8	chr12	109801264	109801640	(23473669)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	943333
433	21.6	1.1	0.0	chr12	111396814	111396901	(21878408)	C	MIRc	SINE/MIR	(115)	153	65	947002
2496	11.7	2.1	0.5	chr12	111555325	111555693	(21719616)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	947322
1609	11.1	0.4	0.0	chr12	112600566	112600791	(20674518)	C	THE1D-int	LTR/ERVL-MaLR	(1402)	229	3	949658
2302	13.0	5.2	1.1	chr12	112600794	112601158	(20674151)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	949658
555	23.6	22.5	2.9	chr12	114982686	114983041	(18292268)	C	MLT1J	LTR/ERVL-MaLR	(55)	457	27	955021
315	29.6	10.9	2.1	chr12	114983080	114983271	(18292038)	+	MIRc	SINE/MIR	16	227	(41)	955022
1575	17.8	7.3	2.0	chr12	115116333	115116417	(18158892)	C	L1MB4	LINE/L1	(3)	6177	6079	955316
2336	12.5	4.0	0.8	chr12	115116418	115116779	(18158530)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	955317
1575	17.8	7.3	2.0	chr12	115116780	115117084	(18158225)	C	L1MB4	LINE/L1	(102)	6078	5765	955316
292	34.1	3.8	5.3	chr12	116400950	116401041	(16874268)	+	MamTip2	DNA/hAT-Tip100	1	96	(209)	957939
2113	12.0	14.2	1.3	chr12	116401042	116401413	(16873896)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	957940
8877	11.8	0.7	0.3	chr12	119266910	119268141	(14007168)	+	MSTA-int	LTR/ERVL-MaLR	395	1631	(0)	964382
2239	13.1	11.0	1.6	chr12	119268142	119268528	(14006781)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	964382
2034	14.7	0.7	0.3	chr12	119268575	119268874	(14006435)	C	AluJr	SINE/Alu	(11)	301	1	964383
2169	8.4	0.7	0.0	chr12	119351672	119351956	(13923353)	C	MSTA-int	LTR/ERVL-MaLR	(1344)	287	1	964584
1919	13.8	15.7	1.6	chr12	119351957	119352323	(13922986)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	964584
10182	11.1	6.8	4.1	chr12	119617859	119618934	(13656375)	+	THE1C-int	LTR/ERVL-MaLR	541	1631	(0)	965169
2672	11.5	0.5	1.6	chr12	119618935	119619313	(13655996)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	965169
328	24.7	7.8	9.3	chr12	119619314	119619358	(13655951)	+	L1MD2	LINE/L1	6110	6156	(203)	965167
1913	17.4	0.0	0.0	chr12	119619359	119619656	(13655653)	+	AluJb	SINE/Alu	1	298	(14)	965171
560	26.5	11.2	2.5	chr12	123775488	123775812	(9499497)	C	L2b	LINE/L2	(230)	3157	2707	974904
2656	9.3	2.4	0.8	chr12	123775813	123776181	(9499128)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	974905
808	21.9	3.2	0.0	chr12	123962992	123963201	(9312108)	+	MER20	DNA/hAT-Charlie	1	217	(2)	975241
1523	8.6	3.5	0.5	chr12	125064663	125064885	(8210424)	C	MER4A1	LTR/ERV1	(242)	230	1	977500
257	32.7	6.1	9.5	chr12	125064954	125065122	(8210187)	+	L2a	LINE/L2	3259	3421	(5)	977496
1356	12.1	10.4	0.0	chr12	125960090	125960295	(7315014)	+	MER30	DNA/hAT-Charlie	1	230	(0)	979066
2696	11.6	0.8	1.9	chr12	125960341	125960719	(7314590)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	979067
2363	13.0	8.7	2.5	chr12	126717741	126718141	(6557168)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	980267
1273	18.7	7.9	2.6	chr12	128351872	128352126	(4923183)	C	MLT2D	LTR/ERVL	(35)	521	126	983027
2735	10.2	0.8	0.3	chr12	128352127	128352499	(4922810)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	983028
2662	10.4	0.3	3.4	chr12	130061487	130061873	(3213436)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	986113
10916	10.7	3.2	1.0	chr12	130061874	130063417	(3211892)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	986113
2609	12.2	0.5	0.3	chr12	130077365	130077734	(3197575)	C	THE1C	LTR/ERVL-MaLR	(0)	375	5	986139
251	29.9	12.9	2.5	chr12	130077771	130077926	(3197383)	C	MIR	SINE/MIR	(39)	169	4	986140
3498	19.9	3.4	2.4	chr12	131212317	131213367	(2061942)	+	L1MB7	LINE/L1	4975	6044	(140)	987862
1884	12.8	9.5	6.8	chr12	131213368	131213736	(2061573)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	987863
242	32.2	5.6	1.9	chr12	131455165	131455319	(1819990)	C	L2b	LINE/L2	(213)	3162	3002	988137
2493	20.0	3.9	0.0	chr12	131584549	131585044	(1690265)	+	MER41D	LTR/ERV1	32	547	(10)	988303
1415	8.4	1.0	1.9	chr12	131585411	131585615	(1689694)	+	L1PA5	LINE/L1	5949	6151	(3)	988304
203	28.8	10.1	0.0	chr12	132523763	132523842	(751467)	C	MER5A	DNA/hAT-Charlie	(99)	90	2	989563
236	27.1	2.9	3.3	chr12	132524118	132524257	(751052)	C	MIRc	SINE/MIR	(86)	144	4	989564
20	35.9	1.0	1.0	chr12	132711086	132711182	(564127)	+	G-rich	Low_complexity	1	98	(0)	989825
262	29.5	0.0	1.1	chr12	132711408	132711496	(563813)	+	Charlie5	DNA/hAT-Charlie	22	109	(2515)	989826
4648	14.9	2.9	3.5	chr13	20530462	20530948	(93833380)	+	L1MB2	LINE/L1	5286	5763	(408)	994408
2191	11.8	4.2	2.9	chr13	20530949	20531172	(93833156)	+	THE1D	LTR/ERVL-MaLR	1	235	(146)	994409
2200	11.8	0.3	0.7	chr13	20531173	20531478	(93832850)	+	AluSq	SINE/Alu	1	305	(8)	994410
1890	24.1	6.4	4.9	chr13	25766221	25766771	(88597557)	C	MER119	DNA/hAT-Charlie	(21)	562	3	1002264
6108	8.8	2.5	1.8	chr13	27125487	27126431	(87237897)	+	L1P2	LINE/L1	5	956	(5228)	1004359
16	9.3	0.0	0.0	chr13	28582644	28582666	(85781662)	+	(T)n	Simple_repeat	1	23	(0)	1006988
15	17.4	5.0	0.0	chr13	28823510	28823549	(85540779)	+	(CCAT)n	Simple_repeat	1	42	(0)	1007383
576	9.1	0.0	0.0	chr13	28823550	28823626	(85540702)	+	MER31B	LTR/ERV1	3	79	(387)	1007384
2579	22.0	2.3	6.4	chr13	28823628	28823705	(85540623)	+	MER67B	LTR/ERV1	1	79	(582)	1007385
2462	11.5	2.1	0.8	chr13	28823706	28824073	(85540255)	C	THE1C	LTR/ERVL-MaLR	(0)	375	3	1007386
2579	22.0	2.3	6.4	chr13	28824074	28824680	(85539648)	+	MER67B	LTR/ERV1	80	657	(4)	1007385
2465	11.9	1.6	1.6	chr13	29378831	29379205	(84985123)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1008074
2251	12.8	2.6	0.0	chr13	32419448	32419570	(81944758)	C	AluSx1	SINE/Alu	(184)	128	2	1012733
2549	7.5	2.2	4.4	chr13	32419571	32419794	(81944534)	+	THE1C	LTR/ERVL-MaLR	161	375	(0)	1012732
2099	13.5	13.6	0.5	chr13	35974428	35974799	(78389529)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1017888
1988	20.6	0.0	1.8	chr13	35974800	35974938	(78389390)	+	MLT1B	LTR/ERVL-MaLR	257	390	(0)	1017887
2014	13.3	13.0	0.8	chr13	40482602	40482973	(73881355)	C	MSTA	LTR/ERVL-MaLR	(4)	424	1	1024183
12	15.7	2.6	5.0	chr13	41311487	41311525	(73052803)	+	(CCTG)n	Simple_repeat	1	40	(0)	1025640
2009	14.8	12.7	0.8	chr13	42913779	42914152	(71450176)	+	MSTA	LTR/ERVL-MaLR	4	428	(0)	1028087
257	20.5	10.3	0.0	chr13	44918161	44918238	(69446090)	+	L2	LINE/L2	2235	2321	(1098)	1031205
1110	27.1	11.8	5.3	chr13	45456681	45457025	(68907303)	+	LTR33	LTR/ERVL	6	383	(132)	1032339
2743	9.7	8.2	1.5	chr13	45457026	45457424	(68906904)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1032340
1110	27.1	11.8	5.3	chr13	45457425	45457553	(68906775)	+	LTR33	LTR/ERVL	384	515	(0)	1032339
2211	13.7	2.4	2.7	chr13	47571366	47571741	(66792587)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1035491
300	23.3	28.7	7.4	chr13	47825190	47825250	(66539078)	+	L2	LINE/L2	1811	1871	(1548)	1035802
2663	12.2	0.8	0.3	chr13	47825251	47825621	(66538707)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	1035803
300	23.3	28.7	7.4	chr13	47825622	47825994	(66538334)	+	L2	LINE/L2	1872	2374	(1045)	1035802
657	31.8	4.8	6.2	chr13	48621433	48621575	(65742753)	+	ERVL47-int	LTR/ERVL	2504	2648	(2598)	1037106
2832	8.6	1.1	0.0	chr13	48621576	48621946	(65742382)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1037114
656	24.5	7.8	3.1	chr13	50082486	50082708	(64281620)	C	MIRb	SINE/MIR	(21)	247	9	1039597
1182	28.6	2.4	3.4	chr13	50665940	50666066	(63698262)	+	ERV3-16A3_I-int	LTR/ERVL	4712	4839	(387)	1040463
2547	13.4	0.3	0.0	chr13	50666067	50666440	(63697888)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1040465
1182	28.6	2.4	3.4	chr13	50666441	50666779	(63697549)	+	ERV3-16A3_I-int	LTR/ERVL	4840	5173	(53)	1040463
1989	17.6	1.6	1.9	chr13	54729746	54730121	(59634207)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1046266
1206	32.6	11.5	2.7	chr13	54730122	54730176	(59634152)	+	L2a	LINE/L2	2082	2138	(1281)	1046265
2097	16.2	1.4	0.6	chr13	55025940	55026300	(59338028)	+	THE1C	LTR/ERVL-MaLR	1	364	(11)	1046644
1003	19.9	3.0	2.5	chr13	55026279	55026479	(59337849)	+	MER67C	LTR/ERV1	204	405	(306)	1046645
2049	15.0	11.4	1.8	chr13	60367602	60367987	(53996341)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1053412
1544	17.3	9.2	2.3	chr13	61753347	61753700	(52610628)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1055151
2126	14.5	4.3	0.3	chr13	62324379	62324738	(52039590)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1055860
17	16.3	2.3	2.3	chr13	62324749	62324791	(52039537)	+	(TTTA)n	Simple_repeat	1	44	(0)	1055861
594	28.7	10.9	9.0	chr13	62750718	62751277	(51613051)	+	L1ME3B	LINE/L1	4683	5246	(900)	1056386
2129	12.8	5.8	0.8	chr13	62751278	62751639	(51612689)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1056387
807	28.6	14.7	1.8	chr13	62751640	62752349	(51611979)	+	L1ME3B	LINE/L1	5247	6052	(190)	1056386
2159	15.1	0.8	1.3	chr13	64091272	64091648	(50272680)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1058120
8997	12.7	6.6	4.0	chr13	64372896	64374433	(49989895)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1058434
2166	14.5	0.5	7.4	chr13	64374434	64374836	(49989492)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1058434
310	23.8	19.7	6.8	chr13	64692228	64692389	(49671939)	C	L1MB8	LINE/L1	(31)	6147	5960	1058866
234	16.9	9.2	0.0	chr13	64692390	64692448	(49671880)	C	L1MC4a	LINE/L1	(0)	7882	7818	1058867
403	22.7	7.6	5.2	chr13	64692432	64692463	(49671865)	C	L1MC4a	LINE/L1	(131)	7864	7838	1058868
2418	10.6	2.1	3.7	chr13	64692464	64692844	(49671484)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1058869
2571	11.9	1.1	0.3	chr13	66552776	66553147	(47811181)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1061182
2023	14.7	3.7	1.9	chr13	66748820	66749187	(47615141)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1061404
268	29.2	22.3	2.0	chr13	66749390	66749588	(47614740)	C	MIR	SINE/MIR	(1)	261	11	1061405
2462	10.1	2.1	0.8	chr13	66985991	66986360	(47377968)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1061711
2471	12.6	0.5	1.6	chr13	68056002	68056380	(46307948)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1063044
9691	13.1	4.1	3.8	chr13	68101442	68103015	(46261313)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1063102
2693	10.9	0.0	0.5	chr13	68103016	68103392	(46260936)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1063102
1531	17.0	8.9	2.2	chr13	68363841	68364195	(46000133)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1063449
2356	14.1	0.5	0.3	chr13	68404421	68404790	(45959538)	C	THE1C	LTR/ERVL-MaLR	(0)	375	5	1063507
9213	13.4	3.4	5.0	chr13	68404795	68405021	(45959307)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1358	1063507
1145	12.3	1.1	0.6	chr13	68914117	68914296	(45450032)	+	THE1C-int	LTR/ERVL-MaLR	1451	1631	(0)	1064130
2049	16.0	3.2	0.8	chr13	68914297	68914662	(45449666)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1064130
194	34.0	8.8	0.0	chr13	68914673	68914775	(45449553)	C	L2	LINE/L2	(348)	3071	2959	1064131
1845	15.4	8.1	4.4	chr13	70489552	70489917	(43874411)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1066203
9020	13.2	9.3	0.5	chr13	70489920	70491403	(43872925)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	1066203
2337	12.2	3.5	1.6	chr13	71061409	71061776	(43302552)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1066969
8681	14.8	5.9	4.0	chr13	71061777	71063325	(43301003)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1066969
2377	12.3	2.1	1.3	chr13	72948619	72948990	(41415338)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1069604
2029	16.1	0.3	2.5	chr13	73269734	73269967	(41094361)	+	MLT1A0	LTR/ERVL-MaLR	10	241	(124)	1070287
2345	12.5	1.6	1.6	chr13	73269968	73270342	(41093986)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1070288
2307	11.3	5.0	1.6	chr13	74449137	74449504	(39914824)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1071960
4719	16.9	4.5	0.2	chr13	75752451	75753487	(38610841)	C	L1PB4	LINE/L1	(10)	6146	5070	1073842
2690	9.9	0.5	0.0	chr13	75753489	75753861	(38610467)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1073843
2736	10.7	0.0	0.3	chr13	76173106	76173481	(38190847)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1074379
9807	13.0	3.2	1.5	chr13	76173482	76175032	(38189296)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	2	1074379
2341	13.7	0.8	1.3	chr13	76960825	76961201	(37403127)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1075507
986	24.5	2.7	6.0	chr13	76961202	76961304	(37403024)	+	L1MEd	LINE/L1	1932	2026	(5077)	1075505
19741	14.2	6.5	1.2	chr13	78114228	78116857	(36247471)	C	L1MA3	LINE/L1	(4519)	3046	226	1077079
2207	12.6	3.9	1.1	chr13	78116858	78117227	(36247101)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1077081
1940	14.0	13.3	1.1	chr13	80909004	80909378	(33454950)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1080879
208	28.4	7.2	9.4	chr13	80909379	80909410	(33454918)	C	MIRb	SINE/MIR	(138)	130	98	1080878
1323	12.4	24.3	0.4	chr13	81205345	81205604	(33158724)	+	THE1C-int	LTR/ERVL-MaLR	1290	1631	(0)	1081278
2149	11.7	6.4	2.5	chr13	81205605	81205962	(33158366)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	1081278
1049	13.4	3.4	0.0	chr13	83073167	83073338	(31290990)	+	THE1C-int	LTR/ERVL-MaLR	1454	1631	(0)	1083552
2474	12.1	1.1	0.5	chr13	83073339	83073711	(31290617)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1083552
487	18.4	1.9	1.0	chr13	83073712	83073815	(31290513)	+	L1M1	LINE/L1	4867	4971	(1175)	1083553
2030	12.1	1.0	0.3	chr13	83073825	83074130	(31290198)	+	THE1C	LTR/ERVL-MaLR	68	375	(0)	1083554
2422	10.5	5.4	0.0	chr13	83656451	83656803	(30707525)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	1084240
182	36.4	2.9	0.0	chr13	85309079	85309144	(29055184)	+	MIRb	SINE/MIR	190	257	(11)	1086361
2374	13.3	1.9	0.0	chr13	85309146	85309513	(29054815)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1086362
2006	14.4	5.3	1.1	chr13	85456510	85456868	(28907460)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1086577
2543	5.3	2.2	0.0	chr13	85476197	85476500	(28887828)	+	AluY	SINE/Alu	1	311	(0)	1086604
187	37.2	4.1	4.1	chr13	85476501	85476637	(28887691)	C	MIR	SINE/MIR	(106)	156	16	1086603
2211	12.5	4.3	1.1	chr13	85647519	85647881	(28716447)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1086812
2120	11.6	2.6	10.8	chr13	87052910	87053325	(27311003)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1088497
19	3.8	0.0	0.0	chr13	87123961	87123987	(27240341)	+	(AAAC)n	Simple_repeat	1	27	(0)	1088600
683	32.5	8.7	2.3	chr13	87124037	87124421	(27239907)	C	MamRTE1	LINE/RTE-BovB	(100)	3712	3301	1088601
1766	16.5	7.4	1.1	chr13	87208666	87209020	(27155308)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	1088708
846	21.0	10.8	1.0	chr13	87209083	87209282	(27155046)	+	AluJr	SINE/Alu	84	305	(7)	1088709
9219	13.1	3.2	5.7	chr13	88018065	88019684	(26344644)	+	THE1C-int	LTR/ERVL-MaLR	1	1578	(2)	1089782
2372	13.7	0.0	1.4	chr13	88019687	88020055	(26344273)	+	THE1C	LTR/ERVL-MaLR	1	364	(11)	1089782
2103	17.6	0.3	1.3	chr13	88743563	88743941	(25620387)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1090707
3801	12.5	6.5	0.3	chr13	89127627	89128250	(25236078)	C	THE1C-int	LTR/ERVL-MaLR	(964)	667	3	1091195
2289	16.4	0.5	0.0	chr13	89128253	89128625	(25235703)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1091195
19	0.0	0.0	0.0	chr13	89128643	89128663	(25235665)	+	(GT)n	Simple_repeat	1	21	(0)	1091196
2352	11.8	2.4	2.9	chr13	89257960	89258333	(25105995)	+	THE1C	LTR/ERVL-MaLR	4	375	(0)	1091364
2035	14.1	5.0	1.4	chr13	89939578	89939944	(24424384)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1092296
2453	13.4	0.3	0.8	chr13	90026529	90026904	(24337424)	+	THE1C	LTR/ERVL-MaLR	2	375	(0)	1092416
9913	16.0	2.3	0.4	chr13	90026907	90028504	(24335824)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	1092416
2410	12.6	2.4	0.0	chr13	91580830	91581194	(22783134)	C	THE1C	LTR/ERVL-MaLR	(0)	375	2	1094452
2554	11.6	0.3	0.8	chr13	91648899	91649273	(22715055)	+	THE1C	LTR/ERVL-MaLR	3	375	(0)	1094549
291	32.1	11.5	6.9	chr13	91649274	91649463	(22714865)	+	MIRb	SINE/MIR	42	245	(23)	1094548
2375	11.8	1.4	0.0	chr13	92344088	92344427	(22019901)	C	THE1C	LTR/ERVL-MaLR	(30)	345	1	1095441
1337	23.4	6.8	1.7	chr13	92344452	92344812	(22019516)	C	LTR52	LTR/ERVL	(9)	412	32	1095442
1652	15.7	13.6	5.1	chr13	96299832	96300047	(18064281)	C	MSTA	LTR/ERVL-MaLR	(0)	428	196	1101417
2255	11.0	0.0	0.0	chr13	96300048	96300356	(18063972)	C	AluSx	SINE/Alu	(0)	312	1	1101418
28	3.3	0.0	0.0	chr13	97916120	97916150	(16448178)	+	(AAGG)n	Simple_repeat	1	31	(0)	1103692
202	29.6	11.4	2.9	chr13	97916152	97916287	(16448041)	C	L2	LINE/L2	(424)	2995	2847	1103693
826	28.9	11.1	2.2	chr13	97916347	97916396	(16447932)	+	L1ME3Cz	LINE/L1	269	318	(679)	1103694
2622	11.5	0.3	4.3	chr13	97916397	97916787	(16447541)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1103695
826	28.9	11.1	2.2	chr13	97916788	97917153	(16447175)	+	L1ME3Cz	LINE/L1	319	726	(271)	1103694
2375	17.5	8.2	8.1	chr13	104277707	104278145	(10086183)	+	L1MC2	LINE/L1	5185	5650	(694)	1113251
2126	14.0	3.7	1.1	chr13	104278146	104278514	(10085814)	C	THE1D	LTR/ERVL-MaLR	(2)	379	1	1113252
2375	16.9	9.2	7.7	chr13	104278515	104278834	(10085494)	+	L1MC2	LINE/L1	5651	5956	(388)	1113251
336	25.7	8.2	2.9	chr13	111175615	111175750	(3188578)	C	MIR	SINE/MIR	(27)	241	91	1122269
2247	12.5	2.1	1.6	chr13	111175751	111176123	(3188205)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1122270
336	29.5	7.8	2.4	chr13	111176124	111176172	(3188156)	C	MIR	SINE/MIR	(171)	97	46	1122269
270	23.2	15.5	4.6	chr13	111176182	111176312	(3188016)	C	L2b	LINE/L2	(515)	2904	2757	1122268
1418	18.8	10.2	2.7	chr13	113156014	113156040	(1208288)	+	MLT1A0	LTR/ERVL-MaLR	2	24	(341)	1124256
1883	13.6	11.9	2.4	chr13	113156041	113156380	(1207948)	C	THE1D	LTR/ERVL-MaLR	(0)	381	5	1124257
1418	18.8	10.2	2.7	chr13	113156381	113156686	(1207642)	+	MLT1A0	LTR/ERVL-MaLR	25	363	(2)	1124256
7622	18.0	4.8	0.5	chr14	20270460	20271819	(86771899)	C	MSTB-int	LTR/ERVL-MaLR	(14)	1637	216	1127761
2433	11.8	2.7	0.8	chr14	20271820	20272187	(86771531)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1127762
10492	11.2	2.3	3.1	chr14	20272188	20273780	(86769938)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	1127762
2277	3.6	3.1	6.2	chr14	20342727	20343030	(86700688)	C	AluY	SINE/Alu	(17)	294	1	1127886
22	3.8	0.0	0.0	chr14	20343033	20343065	(86700653)	+	(T)n	Simple_repeat	1	33	(0)	1127887
1842	14.4	1.1	0.0	chr14	20927559	20927871	(86115847)	+	AluSq2	SINE/Alu	2	313	(0)	1128825
2066	14.2	12.6	3.4	chr14	20927872	20928214	(86115504)	C	MSTA	LTR/ERVL-MaLR	(34)	394	2	1128824
2373	23.3	9.4	5.5	chr14	20928215	20928534	(86115184)	C	MER21C	LTR/ERVL	(488)	450	123	1128823
7373	23.2	8.2	3.6	chr14	23693136	23695235	(83348483)	+	HERV3-int	LTR/ERV1	19	2080	(6346)	1133227
1979	12.8	7.9	1.4	chr14	26086124	26086479	(80957239)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1136338
1900	11.0	11.3	0.9	chr14	29812456	29812795	(77230923)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	1141010
1671	12.9	20.3	0.9	chr14	34804926	34805269	(72238449)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1148656
594	29.1	5.0	4.1	chr14	35919484	35919798	(71123920)	C	L1M5	LINE/L1	(312)	5812	5495	1150863
2525	9.2	1.9	4.4	chr14	35919800	35920021	(71123697)	C	THE1C	LTR/ERVL-MaLR	(0)	375	155	1150864
2044	12.8	0.0	7.3	chr14	35920022	35920349	(71123369)	+	AluSx	SINE/Alu	1	304	(8)	1150865
2428	9.2	6.4	0.3	chr14	36752647	36752996	(70290722)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	1152006
3951	14.5	5.0	3.3	chr14	36752997	36753253	(70290465)	+	L1MB3	LINE/L1	5913	6181	(2)	1152005
1867	22.6	25.9	2.5	chr14	45702534	45703271	(61340447)	C	L1MC5	LINE/L1	(8)	9296	8351	1163443
2075	11.7	6.7	1.7	chr14	45703272	45703627	(61340091)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1163444
1867	22.3	12.9	2.5	chr14	45703628	45703775	(61339943)	C	L1MC5	LINE/L1	(954)	8350	8208	1163443
1275	24.2	6.9	1.0	chr14	46632883	46633279	(60410439)	+	LTR37A	LTR/ERV1	5	426	(0)	1164525
1328	12.0	1.0	0.0	chr14	46633347	46633546	(60410172)	+	THE1C	LTR/ERVL-MaLR	169	370	(5)	1164526
447	25.0	0.0	0.0	chr14	46633630	46633709	(60410009)	C	AluJr	SINE/Alu	(232)	80	1	1164527
2057	15.1	2.9	2.4	chr14	47493885	47494257	(59549461)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1165652
5138	16.7	3.1	1.7	chr14	48404491	48405953	(58637765)	C	L1MA4	LINE/L1	(4)	7358	5872	1166720
2201	16.5	1.6	0.0	chr14	48405954	48406322	(58637396)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1166721
29	0.0	0.0	0.0	chr14	50235502	50235526	(56808192)	+	(AT)n	Simple_repeat	1	25	(0)	1169581
1337	23.7	12.9	9.3	chr14	50235527	50235584	(56808134)	+	L1ME4b	LINE/L1	658	735	(157)	1169580
2884	8.6	1.1	1.3	chr14	50235585	50235959	(56807759)	C	THE1C	LTR/ERVL-MaLR	(1)	374	1	1169582
1337	23.7	12.9	9.3	chr14	50235960	50236047	(56807671)	+	L1ME4b	LINE/L1	736	838	(54)	1169580
669	16.8	2.5	1.7	chr14	50236051	50236169	(56807549)	C	AluJo	SINE/Alu	(180)	132	13	1169583
2109	10.4	1.5	6.7	chr14	50594045	50594403	(56449315)	C	THE1C	LTR/ERVL-MaLR	(35)	340	1	1170215
2419	12.3	0.5	1.6	chr14	53419281	53419659	(53624059)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1174501
2438	12.0	2.4	0.0	chr14	53915790	53916155	(53127563)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1175200
1643	18.7	0.3	4.9	chr14	53916180	53916505	(53127213)	+	AluJo	SINE/Alu	1	311	(1)	1175201
2128	15.1	8.4	0.8	chr14	59051865	59052259	(47991459)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1183189
9957	11.0	5.1	3.9	chr14	68101247	68102806	(38940912)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1197220
2308	11.6	4.6	0.6	chr14	68102807	68103161	(38940557)	C	THE1C	LTR/ERVL-MaLR	(0)	375	6	1197220
2626	7.1	2.7	0.5	chr14	68973244	68973610	(38070108)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1198584
2316	12.3	4.5	1.1	chr14	70340053	70340414	(36703304)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1201037
2441	11.3	3.5	1.1	chr14	70747167	70747532	(36296186)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1201663
345	23.5	15.3	3.1	chr14	70747540	70747674	(36296044)	+	MIRc	SINE/MIR	25	172	(96)	1201664
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
1863	11.0	17.6	1.9	chr14	77873594	77873908	(29169810)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1215191
429	31.4	8.4	1.1	chr14	77873936	77874112	(29169606)	C	MIR3	SINE/MIR	(0)	208	18	1215192
1050	27.3	12.6	2.7	chr14	80252819	80252978	(26790740)	C	L1ME3Cz	LINE/L1	(255)	742	573	1218929
2619	11.0	0.3	0.3	chr14	80252979	80253353	(26790365)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1218930
2443	28.5	11.3	4.0	chr14	80253354	80254273	(26789445)	C	L1ME3Cz	LINE/L1	(758)	5388	4781	1218929
299	28.7	1.1	0.0	chr14	81580625	81580711	(25463007)	+	MamRep4096	DNA/hAT-Tip100	330	417	(9)	1220844
457	30.9	3.5	0.0	chr14	81580713	81580838	(25462880)	C	MIRb	SINE/MIR	(105)	163	33	1220845
2340	10.7	2.9	1.6	chr14	81580839	81581208	(25462510)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1220846
1882	16.6	0.3	0.3	chr14	81581295	81581584	(25462134)	+	AluJb	SINE/Alu	9	298	(14)	1220847
1944	17.1	1.9	2.6	chr14	86272855	86273232	(20770486)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1227360
517	14.4	0.0	3.2	chr14	86273233	86273311	(20770407)	C	MLT2C2	LTR/ERVL	(384)	80	2	1227359
1758	12.4	13.9	0.9	chr14	88882586	88882911	(18160807)	C	THE1D	LTR/ERVL-MaLR	(0)	375	1	1231129
4615	11.5	0.9	0.9	chr14	88882912	88883562	(18160156)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	981	1231129
2841	7.6	1.3	1.1	chr14	90526547	90526919	(16516799)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	1234097
2584	21.7	2.5	1.1	chr14	90526920	90527331	(16516387)	C	L1MD3	LINE/L1	(221)	7774	7354	1234096
2337	9.5	7.5	2.8	chr14	92975806	92976162	(14067556)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1238587
1188	20.6	6.0	4.8	chr14	92976163	92976245	(14067473)	+	MLT2B4	LTR/ERVL	335	464	(92)	1238586
256	29.8	3.1	1.1	chr14	92976246	92976340	(14067378)	+	MLT1H1	LTR/ERVL-MaLR	29	125	(444)	1238588
281	25.6	2.3	1.1	chr14	92976370	92976531	(14067187)	+	MLT1H1	LTR/ERVL-MaLR	185	437	(52)	1238588
1672	13.6	14.3	0.9	chr14	95634350	95634669	(11409049)	+	MSTA	LTR/ERVL-MaLR	59	428	(0)	1243411
262	32.5	11.0	4.2	chr14	95634674	95634866	(11408852)	C	MIRb	SINE/MIR	(60)	208	4	1243412
48	15.6	1.1	0.0	chr14	99274710	99274797	(7768921)	+	(CCT)n	Simple_repeat	1	89	(0)	1249761
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
447	35.5	2.6	0.5	chr14	101356284	101356470	(5687248)	+	MIR	SINE/MIR	41	231	(31)	1253034
1035	15.5	3.0	11.4	chr14	101356551	101356676	(5687042)	+	L1MB5	LINE/L1	5807	5926	(248)	1253035
1902	15.3	5.8	0.0	chr14	101356677	101356970	(5686748)	+	AluSz	SINE/Alu	1	312	(0)	1253036
1328	23.2	2.8	9.0	chr14	105514757	105514844	(1528874)	C	L1MD	LINE/L1	(862)	5284	5231	1259775
2641	9.4	0.5	5.1	chr14	105514845	105515187	(1528531)	+	THE1C	LTR/ERVL-MaLR	1	337	(38)	1259779
2255	11.3	0.0	0.7	chr14	105515188	105515488	(1528230)	C	AluSq2	SINE/Alu	(12)	301	3	1259780
2449	12.1	13.1	0.8	chr15	29911387	29911761	(72079428)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1276222
193	36.1	3.0	4.9	chr15	29911880	29911964	(72079225)	C	L2c	LINE/L2	(38)	3349	3264	1276223
2254	11.5	4.5	3.5	chr15	34588273	34588649	(67402540)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1283072
602	34.9	6.4	3.4	chr15	35528944	35529139	(66462050)	+	L2c	LINE/L2	2932	3121	(266)	1284484
1843	12.6	16.4	0.8	chr15	35529140	35529500	(66461689)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1284485
602	34.9	6.4	3.4	chr15	35529501	35529745	(66461444)	+	L2c	LINE/L2	3122	3387	(0)	1284484
2056	14.8	10.6	1.1	chr15	36759633	36760014	(65231175)	C	MSTA	LTR/ERVL-MaLR	(5)	423	1	1286088
264	31.3	10.2	2.8	chr15	36760015	36760231	(65230958)	C	L1ME3G	LINE/L1	(263)	661	427	1286089
225	31.6	2.5	1.2	chr15	40859100	40859179	(61132010)	+	L2a	LINE/L2	3335	3415	(11)	1292080
203	32.3	2.5	1.7	chr15	40859381	40859485	(61131704)	C	L2a	LINE/L2	(56)	3370	3243	1292081
2535	9.9	0.7	0.0	chr15	52539009	52539311	(49451878)	+	AluSp	SINE/Alu	1	305	(8)	1311470
2123	13.8	5.6	2.5	chr15	52539369	52539731	(49451458)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1311471
10901	10.6	4.6	4.4	chr15	52539732	52541258	(49449931)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	44	1311471
2504	8.8	0.6	0.3	chr15	56010485	56010813	(45980376)	+	THE1C	LTR/ERVL-MaLR	1	330	(45)	1316563
2461	8.5	0.7	0.0	chr15	56010814	56011106	(45980083)	+	AluSq2	SINE/Alu	1	295	(18)	1316564
12	19.9	0.0	8.3	chr15	58771059	58771106	(43220083)	+	(GCCC)n	Simple_repeat	1	48	(0)	1320768
2395	10.0	0.3	4.5	chr15	62398057	62398413	(39592776)	+	THE1C	LTR/ERVL-MaLR	1	342	(33)	1326840
9561	10.3	7.9	6.5	chr15	62398423	62399978	(39591211)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	1326840
2347	9.4	6.1	0.6	chr15	62399979	62400332	(39590857)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1326840
13	0.0	0.0	0.0	chr15	63385761	63385777	(38605412)	+	(ATT)n	Simple_repeat	1	17	(0)	1328446
299	30.5	10.7	2.9	chr15	63386125	63386296	(38604893)	+	MIRc	SINE/MIR	20	206	(62)	1328447
1490	14.2	10.0	0.4	chr15	65029829	65030118	(36961071)	C	AluJr	SINE/Alu	(0)	312	1	1331740
371	25.8	15.1	0.0	chr15	65518078	65518201	(36472988)	+	MIRc	SINE/MIR	14	159	(109)	1332811
11705	9.9	2.8	0.8	chr15	66084301	66088368	(35902821)	+	L1PBa1	LINE/L1	251	4403	(2459)	1333957
1954	9.8	7.1	0.0	chr15	69462458	69462732	(32528457)	C	AluSp	SINE/Alu	(17)	296	1	1340266
210	25.5	6.8	4.2	chr15	69852801	69852901	(32138288)	+	MIR	SINE/MIR	122	236	(32)	1341027
13	21.7	0.0	7.3	chr15	72272560	72272614	(29718575)	+	G-rich	Low_complexity	1	55	(0)	1345170
629	32.2	5.5	2.4	chr15	72273122	72273306	(29717883)	+	MIRb	SINE/MIR	8	202	(66)	1345171
2538	9.6	4.3	0.0	chr15	73151457	73151809	(28839380)	C	THE1C	LTR/ERVL-MaLR	(6)	369	1	1346689
19	21.5	1.5	4.5	chr15	74956809	74956873	(27034316)	+	(GCCCC)n	Simple_repeat	1	66	(0)	1349865
14	10.3	3.0	2.9	chr15	74956911	74956943	(27034246)	+	G-rich	Low_complexity	1	34	(0)	1349866
428	28.8	3.0	1.8	chr15	74956962	74957124	(27034065)	C	MamRep1879	DNA/hAT-Tip100?	(36)	180	16	1349867
274	31.4	4.8	7.3	chr15	75626243	75626393	(26364796)	+	L2b	LINE/L2	3221	3367	(8)	1351238
800	29.5	8.4	7.0	chr15	81973943	81974306	(20016883)	+	L1M6	LINE/L1	1610	2002	(4494)	1362120
2634	10.6	4.5	0.3	chr15	81974307	81974665	(20016524)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1362129
2048	14.6	1.1	8.2	chr15	83360755	83361158	(18630031)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1364501
626	32.8	0.8	2.4	chr15	86374742	86374988	(15616201)	+	MIR	SINE/MIR	3	245	(17)	1369325
2120	12.7	6.8	1.1	chr15	86375165	86375523	(15615666)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1369326
2855	14.4	6.9	1.9	chr15	86589954	86590220	(15400969)	C	LTR49	LTR/ERV1	(0)	595	308	1369601
2504	11.1	1.3	0.8	chr15	86590221	86590593	(15400596)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1369602
2855	14.4	6.9	1.9	chr15	86590594	86590890	(15400299)	C	LTR49	LTR/ERV1	(288)	307	1	1369601
2734	9.8	2.4	0.0	chr15	92534444	92534809	(9456380)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1380015
1216	25.2	15.1	2.5	chr15	92534810	92535192	(9455997)	C	L2a	LINE/L2	(30)	3396	2946	1380014
1589	15.3	5.2	5.2	chr15	98578417	98578530	(3412659)	+	AluJo	SINE/Alu	1	114	(198)	1388870
2127	14.2	4.2	1.9	chr15	98578531	98578902	(3412287)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1388871
1589	15.3	5.2	5.2	chr15	98578903	98579075	(3412114)	+	AluJo	SINE/Alu	115	288	(24)	1388870
446	30.6	8.8	1.0	chr15	99906913	99907110	(2084079)	+	HAL1ME	LINE/L1	695	909	(1556)	1390781
2158	14.7	11.2	1.0	chr15	100733983	100734366	(1256823)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1391878
263	31.2	2.5	9.8	chr15	100734367	100734397	(1256792)	+	MIRb	SINE/MIR	247	268	(0)	1391877
2627	11.8	0.5	0.5	chr15	101720669	101721043	(270146)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1393175
40	5.5	3.5	0.0	chr16	10001	10057	(90328288)	+	(TAACCC)n	Simple_repeat	1	59	(0)	1394055
3841	13.7	2.4	0.7	chr16	10059	11142	(90327203)	C	TAR1	Satellite/telo	(43)	1103	1	1394056
2065	13.1	0.0	0.7	chr16	50527	50823	(90287522)	C	AluSz	SINE/Alu	(17)	295	1	1394116
2183	10.8	5.9	5.6	chr16	50824	51130	(90287215)	C	THE1C	LTR/ERVL-MaLR	(58)	317	1	1394115
259	36.7	3.2	0.8	chr16	51251	51371	(90286974)	C	MIRb	SINE/MIR	(109)	159	36	1394117
464	31.2	4.2	0.5	chr16	1025755	1025960	(89312385)	C	MER2	DNA/TcMar-Tigger	(130)	215	2	1395420
9715	11.7	2.5	2.1	chr16	1798666	1799398	(88538947)	+	THE1C-int	LTR/ERVL-MaLR	912	1631	(0)	1396388
2291	14.8	2.4	1.1	chr16	1799399	1799768	(88538577)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1396388
180	33.8	5.1	1.3	chr16	3400595	3400669	(86937676)	C	L2a	LINE/L2	(1)	3425	3348	1399109
21	6.7	0.0	2.9	chr16	4293973	4294006	(86044339)	+	(CAG)n	Simple_repeat	1	34	(0)	1400871
1808	14.9	15.7	1.4	chr16	5702101	5702466	(84635879)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1403836
1845	16.3	12.6	4.8	chr16	7389892	7390284	(82948061)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1407059
1776	17.8	0.7	2.0	chr16	15530420	15530597	(74807748)	C	AluJo	SINE/Alu	(23)	289	112	1424625
2020	13.8	6.6	4.6	chr16	15530598	15530896	(74807449)	+	THE1D	LTR/ERVL-MaLR	1	322	(59)	1424626
2261	11.3	0.7	1.0	chr16	15530897	15531206	(74807139)	C	AluSx3	SINE/Alu	(2)	309	1	1424627
2145	15.3	2.1	1.4	chr16	15962476	15962845	(74375500)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	1425717
8010	11.0	5.5	1.5	chr16	15962846	15963948	(74374397)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	461	1425717
2402	13.6	2.1	2.9	chr16	15982257	15982634	(74355711)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1425762
1590	12.9	0.7	13.9	chr16	19091505	19091584	(71246761)	C	AluJb	SINE/Alu	(187)	125	73	1432664
2270	10.5	8.8	1.7	chr16	19091585	19091932	(71246413)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1432666
1771	16.5	1.0	3.7	chr16	27878071	27878192	(62460153)	C	AluJr	SINE/Alu	(23)	289	167	1452124
2356	13.4	2.7	1.4	chr16	27878193	27878562	(62459783)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1452125
1771	16.5	1.0	3.7	chr16	27878563	27878736	(62459609)	C	AluJr	SINE/Alu	(146)	166	1	1452124
13	8.9	2.3	9.1	chr16	30942390	30942432	(59395913)	+	(TGCTCTC)n	Simple_repeat	1	44	(0)	1459255
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
26	2.1	7.5	3.5	chr16	34699521	34699573	(55638772)	+	(TGATGATTCCAT)n	Simple_repeat	1	57	(0)	1464055
26160	6.2	1.6	0.1	chr16	50343340	50349410	(39988935)	+	L1PA5	LINE/L1	4	6154	(0)	1472285
1146	17.3	11.9	1.4	chr16	50349438	50349654	(39988691)	+	MSTA	LTR/ERVL-MaLR	186	428	(0)	1472284
2464	10.5	3.7	0.6	chr16	50543212	50543574	(39794771)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1472710
16	17.4	0.0	4.7	chr16	67842337	67842379	(22495966)	+	(GCGG)n	Simple_repeat	1	43	(0)	1502467
13	14.0	4.7	4.4	chr16	69565635	69565677	(20772668)	+	(CTCTG)n	Simple_repeat	1	45	(0)	1506104
14	5.0	0.0	0.0	chr16	69565978	69565998	(20772347)	+	(GCG)n	Simple_repeat	1	21	(0)	1506105
2148	14.7	3.0	1.4	chr16	72890100	72890465	(17447880)	+	THE1C	LTR/ERVL-MaLR	1	372	(3)	1512108
20	6.5	0.0	2.9	chr16	73096162	73096195	(17242150)	+	(CTGC)n	Simple_repeat	1	34	(0)	1512405
2007	15.2	1.5	0.0	chr16	82165545	82165872	(8172473)	+	Tigger3a	DNA/TcMar-Tigger	2	334	(14)	1528763
867	12.8	1.3	0.0	chr16	82165895	82166042	(8172303)	+	L1MD	LINE/L1	5480	5629	(730)	1528764
477	27.4	8.8	0.0	chr16	82166048	82166233	(8172112)	+	L1MD2	LINE/L1	6142	6345	(14)	1528765
2191	24.0	2.2	3.2	chr16	84471388	84471633	(5866712)	+	L1MA4A	LINE/L1	675	918	(5931)	1532894
2653	8.7	2.4	1.9	chr16	84471634	84472006	(5866339)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1532895
2191	24.0	2.2	3.2	chr16	84472007	84472353	(5865992)	+	L1MA4A	LINE/L1	919	1262	(5587)	1532894
2392	8.9	0.3	0.0	chr16	84951853	84952155	(5386190)	+	AluSq	SINE/Alu	2	305	(8)	1533908
444	34.0	6.9	1.0	chr16	84952158	84952362	(5385983)	C	L2b	LINE/L2	(360)	3059	2842	1533906
368	33.3	4.2	1.0	chr16	85413525	85413733	(4924612)	C	Charlie7a	DNA/hAT-Charlie	(0)	272	57	1534785
2256	13.6	3.7	2.4	chr16	85413748	85414117	(4924228)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1534786
2252	11.7	14.0	0.8	chr16	87260867	87261237	(3077108)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1538112
1986	15.0	12.6	2.9	chr16	88556294	88556678	(1781667)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1540107
196	29.9	2.5	1.3	chr17	1755876	1755953	(81501488)	+	MIRb	SINE/MIR	16	94	(174)	1547724
408	26.1	15.4	0.9	chr17	1755949	1756315	(81501126)	C	L2a	LINE/L2	(123)	3303	2870	1547725
2091	8.2	5.1	0.0	chr17	1756328	1756606	(81500835)	C	AluSx	SINE/Alu	(17)	295	2	1547726
2142	11.0	8.5	1.7	chr17	1971077	1971427	(81286014)	+	THE1D	LTR/ERVL-MaLR	4	380	(1)	1548196
466	30.3	8.4	6.8	chr17	1971428	1971546	(81285895)	C	MIRb	SINE/MIR	(107)	161	29	1548195
12	22.5	3.9	7.4	chr17	2303520	2303559	(80953882)	+	G-rich	Low_complexity	1	68	(13)	1548855
15	17.7	0.0	0.0	chr17	2303560	2303591	(80953850)	+	GA-rich	Low_complexity	1	32	(0)	1548856
2076	9.3	2.8	0.0	chr17	4909369	4909648	(78347793)	C	AluSx	SINE/Alu	(11)	301	14	1554030
817	26.4	8.1	1.2	chr17	7840990	7841231	(75416210)	+	MIR	SINE/MIR	2	261	(1)	1559624
12	16.6	4.5	4.3	chr17	7841507	7841550	(75415891)	+	(CAGA)n	Simple_repeat	1	46	(0)	1559625
12	27.2	2.3	0.0	chr17	7841782	7841825	(75415616)	+	G-rich	Low_complexity	1	45	(0)	1559626
15	19.9	0.0	4.5	chr17	16215481	16215524	(67041917)	+	(GCC)n	Simple_repeat	1	44	(0)	1574432
2313	9.5	0.0	0.3	chr17	16536187	16536519	(66720922)	+	AluSc	SINE/Alu	1	309	(0)	1575178
14	21.1	7.3	0.0	chr17	19533768	19533822	(63723619)	+	G-rich	Low_complexity	1	59	(0)	1580808
368	20.4	4.8	1.9	chr17	19649313	19649469	(63607972)	C	L1M5	LINE/L1	(809)	5385	5219	1581023
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
14	26.4	4.2	2.7	chr17	28842798	28842868	(54414573)	+	(GCCTGC)n	Simple_repeat	1	74	(0)	1589458
2393	8.3	0.7	0.0	chr17	28843137	28843436	(54414005)	C	AluSp	SINE/Alu	(11)	302	1	1589459
182	35.7	0.0	0.0	chr17	29112236	29112305	(54145136)	+	MIRb	SINE/MIR	191	260	(8)	1589922
12	17.2	8.3	1.9	chr17	29390529	29390576	(53866865)	+	(CCGGCCG)n	Simple_repeat	1	52	(0)	1590555
16	16.5	3.8	5.5	chr17	31008692	31008744	(52248697)	+	(CCG)n	Simple_repeat	1	55	(0)	1593821
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
19	25.7	4.0	3.9	chr17	35764050	35764148	(47493293)	+	(GGACGA)n	Simple_repeat	1	103	(0)	1602754
454	30.4	9.0	6.8	chr17	38663107	38663530	(44593911)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	15	1608304
17	15.5	0.0	0.0	chr17	42964656	42964684	(40292757)	+	A-rich	Low_complexity	1	29	(0)	1616764
2601	5.1	0.3	0.6	chr17	42964834	42965144	(40292297)	+	AluSx1	SINE/Alu	2	311	(1)	1616765
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
15	14.9	2.6	2.5	chr17	48101118	48101156	(35156285)	+	G-rich	Low_complexity	1	40	(0)	1627294
17	10.5	3.2	0.0	chr17	48101208	48101238	(35156203)	+	(CCG)n	Simple_repeat	1	32	(0)	1627295
12	7.2	2.9	8.3	chr17	49362226	49362260	(33895181)	+	GA-rich	Low_complexity	1	36	(0)	1629784
16	16.4	4.9	0.0	chr17	49362245	49362285	(33895156)	+	(GCGC)n	Simple_repeat	1	43	(0)	1629785
12	28.7	0.0	2.1	chr17	49362266	49362313	(33895128)	+	(CGCCCC)n	Simple_repeat	1	48	(0)	1629786
1671	17.5	4.3	0.7	chr17	49475341	49475609	(33781832)	+	AluJb	SINE/Alu	1	279	(33)	1630013
2291	12.4	8.9	2.5	chr17	49475610	49476006	(33781435)	C	MSTA	LTR/ERVL-MaLR	(3)	425	1	1630014
1619	25.6	2.2	1.0	chr17	49543424	49543834	(33713607)	C	L1MEc	LINE/L1	(5942)	458	43	1630135
2237	13.6	11.9	0.8	chr17	49543861	49544239	(33713202)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	1630136
368	27.8	1.8	0.0	chr17	50151465	50151572	(33105869)	+	MER5A	DNA/hAT-Charlie	34	143	(46)	1631243
2580	12.1	0.5	0.0	chr17	53666470	53666842	(29590599)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1637049
8958	14.4	6.9	4.4	chr17	53666845	53668430	(29589011)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	1637049
3536	17.7	6.6	1.7	chr17	61427248	61427938	(21829503)	+	L1MC3	LINE/L1	6920	7649	(136)	1651051
2262	12.1	9.2	0.3	chr17	61427939	61428285	(21829156)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1651052
3536	17.7	6.6	1.7	chr17	61428286	61428415	(21829026)	+	L1MC3	LINE/L1	7650	7784	(1)	1651051
1471	11.3	9.1	2.8	chr17	63505423	63505795	(19751646)	+	MSTA	LTR/ERVL-MaLR	7	422	(6)	1654832
1880	15.8	11.4	1.5	chr17	65755104	65755485	(17501956)	C	MSTA	LTR/ERVL-MaLR	(25)	401	1	1659237
2721	8.2	2.7	0.5	chr17	66457515	66457881	(16799560)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1660299
2617	12.3	0.3	0.0	chr17	68479729	68480102	(14777339)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1664276
2466	12.3	0.8	0.8	chr17	69748592	69748959	(13508482)	C	THE1C	LTR/ERVL-MaLR	(7)	368	1	1666259
2220	12.0	8.4	1.3	chr17	70269071	70269467	(12987974)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1667055
2159	10.7	5.5	0.3	chr17	70399611	70399938	(12857503)	+	THE1C-int	LTR/ERVL-MaLR	1231	1576	(4)	1667249
2150	12.5	5.9	1.7	chr17	70399943	70400301	(12857140)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1667249
774	26.5	2.3	6.3	chr17	72791515	72791617	(10465824)	C	MIR	SINE/MIR	(3)	259	155	1671019
2453	11.8	2.9	0.8	chr17	72791618	72791984	(10465457)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1671020
774	26.5	2.3	6.3	chr17	72791985	72792055	(10465386)	C	MIR	SINE/MIR	(108)	154	90	1671019
1903	21.0	9.3	0.8	chr17	72792056	72792539	(10464902)	C	LTR53B	LTR/ERVL	(0)	533	5	1671021
1285	23.6	7.2	1.9	chr17	74142953	74143311	(9114130)	+	L1ME2	LINE/L1	5036	5419	(1118)	1673556
2750	10.7	0.5	0.0	chr17	74143312	74143684	(9113757)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1673563
1807	21.5	7.4	15.5	chr17	74143685	74143843	(9113598)	+	L1ME2	LINE/L1	5849	6032	(523)	1673556
2208	26.9	10.8	1.9	chr17	76168029	76168966	(7088475)	C	HAL1	LINE/L1	(0)	2507	1476	1677489
1581	22.2	4.9	2.2	chr17	76875003	76875192	(6382249)	C	L1ME3A	LINE/L1	(75)	6098	5904	1678941
2740	10.5	0.0	0.5	chr17	76875193	76875567	(6381874)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	1678942
1581	22.2	4.9	2.2	chr17	76875568	76875653	(6381788)	C	L1ME3A	LINE/L1	(270)	5903	5812	1678941
2356	8.1	0.0	0.7	chr17	77224919	77225213	(6032228)	C	AluSc8	SINE/Alu	(18)	293	1	1679673
2407	12.0	4.4	4.7	chr17	77225214	77225281	(6032160)	C	MSTA	LTR/ERVL-MaLR	(230)	198	131	1679672
2409	11.6	5.3	0.8	chr17	77225282	77225639	(6031802)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1679674
2407	12.0	4.4	4.7	chr17	77225640	77225769	(6031672)	C	MSTA	LTR/ERVL-MaLR	(298)	130	1	1679672
2454	14.6	4.3	5.1	chr17	77701875	77702034	(5555407)	+	MER87B	LTR/ERV1	1	162	(347)	1680493
2700	9.9	0.5	0.3	chr17	77702035	77702408	(5555033)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1680494
2454	14.6	4.3	5.1	chr17	77702409	77702760	(5554681)	+	MER87B	LTR/ERV1	163	509	(0)	1680493
19	20.8	1.5	5.8	chr17	78168588	78168655	(5088786)	+	(GCG)n	Simple_repeat	1	69	(0)	1681320
13	19.8	0.0	6.5	chr17	78168805	78168850	(5088591)	+	(GGCGGC)n	Simple_repeat	1	46	(0)	1681321
23	11.4	3.8	8.5	chr17	78168845	78168923	(5088518)	+	(CCCGCGT)n	Simple_repeat	1	82	(0)	1681322
573	22.4	5.6	1.7	chr17	78648671	78648698	(4608743)	+	L2a	LINE/L2	3246	3276	(150)	1682216
2457	9.9	0.8	2.9	chr17	78648699	78648916	(4608525)	C	THE1C	LTR/ERVL-MaLR	(0)	375	156	1682217
2288	9.9	0.0	0.3	chr17	78648917	78649228	(4608213)	+	AluSc8	SINE/Alu	1	311	(0)	1682218
15	24.5	4.7	1.5	chr17	79009588	79009651	(4247790)	+	(GGCCGCG)n	Simple_repeat	1	67	(0)	1682840
23	11.2	0.0	0.0	chr17	79009696	79009734	(4247707)	+	(GGCTG)n	Simple_repeat	1	39	(0)	1682841
2339	12.5	10.3	0.8	chr17	79352123	79352509	(3904932)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1683326
2139	14.9	12.4	1.1	chr17	79447806	79448184	(3809257)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1683437
228	33.9	16.1	3.0	chr17	80194021	80194391	(3063050)	+	L2b	LINE/L2	2946	3374	(1)	1684635
329	12.8	0.0	17.5	chr17	80194488	80194525	(3062916)	+	MIRb	SINE/MIR	99	137	(131)	1684636
2180	11.6	6.1	3.3	chr17	80194526	80194889	(3062552)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1684637
19	16.4	0.0	0.0	chr17	81027134	81027167	(2230274)	+	GA-rich	Low_complexity	1	34	(0)	1685802
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
2213	11.1	1.0	0.0	chr17	82586620	82586916	(670525)	+	AluSp	SINE/Alu	1	300	(13)	1687926
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
389	25.8	18.1	4.0	chr18	5279111	5279203	(75094082)	+	HAL1	LINE/L1	1587	1710	(797)	1697024
1921	15.4	9.1	2.5	chr18	5279204	5279406	(75093879)	C	MSTA	LTR/ERVL-MaLR	(0)	428	201	1697026
2475	7.6	0.0	1.3	chr18	5279407	5279709	(75093576)	C	AluY	SINE/Alu	(12)	299	1	1697027
398	25.9	2.7	13.3	chr18	6809346	6809395	(73563890)	+	L2a	LINE/L2	3276	3325	(101)	1699089
2253	11.8	7.2	6.6	chr18	6809396	6809820	(73563465)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1699090
398	25.9	2.7	13.3	chr18	6809821	6809934	(73563351)	+	L2a	LINE/L2	3326	3421	(5)	1699089
29	0.0	0.0	0.0	chr18	9074198	9074224	(71299061)	+	(TTTTAT)n	Simple_repeat	1	27	(0)	1702403
2313	7.9	0.0	0.4	chr18	9074225	9074504	(71298781)	C	AluSc	SINE/Alu	(30)	279	1	1702404
2676	10.7	0.3	0.5	chr18	9456171	9456538	(70916747)	C	THE1C	LTR/ERVL-MaLR	(8)	367	1	1703073
420	25.4	19.2	2.5	chr18	9456539	9456820	(70916465)	+	HAL1	LINE/L1	62	392	(2115)	1703074
2097	9.6	0.0	1.1	chr18	24076010	24076279	(56297006)	C	AluSx1	SINE/Alu	(45)	267	1	1717310
10271	11.5	3.4	4.2	chr18	26623704	26625296	(53747989)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	1721235
2658	10.3	1.3	0.3	chr18	26625298	26625667	(53747618)	+	THE1C	LTR/ERVL-MaLR	2	375	(0)	1721235
522	28.7	6.5	3.2	chr18	26691144	26691395	(53681890)	+	MLT1K	LTR/ERVL-MaLR	297	557	(38)	1721359
21	13.2	0.0	0.0	chr18	26691397	26691429	(53681856)	+	(T)n	Simple_repeat	1	33	(0)	1721360
2366	11.0	5.9	1.9	chr18	26691444	26691803	(53681482)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1721361
350	29.8	11.1	2.9	chr18	30666891	30667163	(49706122)	+	L1MC	LINE/L1	2921	3218	(2928)	1726659
1459	13.5	1.8	1.3	chr18	30667167	30667464	(49705821)	C	THE1C	LTR/ERVL-MaLR	(0)	408	1	1726660
9975	12.0	3.5	4.1	chr18	30667465	30669054	(49704231)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1726660
2295	9.6	6.1	0.8	chr18	31361516	31361872	(49011413)	C	THE1D	LTR/ERVL-MaLR	(0)	381	5	1727579
4532	17.0	2.7	2.5	chr18	32154189	32154566	(48218719)	+	MER6	DNA/TcMar-Tigger	57	422	(443)	1728964
2170	13.8	3.7	0.0	chr18	32154567	32154927	(48218358)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1728966
4532	17.0	2.7	2.5	chr18	32154928	32155350	(48217935)	+	MER6	DNA/TcMar-Tigger	423	865	(0)	1728964
1377	35.9	8.5	4.9	chr18	34618800	34620404	(45752881)	C	L2c	LINE/L2	(1)	3386	1717	1732187
2397	12.6	7.3	0.5	chr18	34620477	34620874	(45752411)	C	MSTA	LTR/ERVL-MaLR	(1)	427	1	1732188
231	31.7	7.7	0.8	chr18	35123802	35123922	(45249363)	C	L2a	LINE/L2	(21)	3405	3276	1732875
198	21.2	8.0	10.3	chr18	35123948	35124063	(45249222)	C	L2a	LINE/L2	(228)	3159	3047	1732875
2487	11.1	1.3	0.8	chr18	35124074	35124446	(45248839)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1732876
2505	11.2	4.5	0.0	chr18	50585675	50586032	(29787253)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1755377
1748	12.7	0.0	0.4	chr18	50765732	50765993	(29607292)	C	MSTA-int	LTR/ERVL-MaLR	(1370)	261	1	1755707
1865	16.5	12.2	2.1	chr18	50765994	50766377	(29606908)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1755707
412	30.2	6.9	3.0	chr18	50766379	50766640	(29606645)	C	MLT1J-int	LTR/ERVL-MaLR	(67)	1320	1048	1755708
900	9.8	0.0	0.0	chr18	51198420	51198531	(29174754)	C	AluSx3	SINE/Alu	(12)	299	188	1756520
2601	6.0	0.0	1.7	chr18	51198533	51198831	(29174454)	+	AluSg	SINE/Alu	9	302	(8)	1756521
2496	10.9	1.3	1.6	chr18	54662807	54663180	(25710105)	+	THE1C	LTR/ERVL-MaLR	3	375	(0)	1761579
2674	12.3	0.3	0.8	chr18	55143795	55144170	(25229115)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	1762289
363	23.8	0.0	1.2	chr18	59402832	59402912	(20970373)	C	MIRc	SINE/MIR	(107)	161	82	1768893
2477	12.1	0.8	0.0	chr18	69101207	69101578	(11271707)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1782725
10160	11.0	4.3	1.2	chr18	69940311	69941840	(10431445)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	1783886
2582	11.4	1.6	0.5	chr18	69941841	69942211	(10431074)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1783886
1053	20.9	9.7	2.6	chr18	69942212	69942288	(10430997)	+	MLT2D	LTR/ERVL	335	408	(6)	1783885
12389	17.2	3.1	1.8	chr18	70156793	70162379	(10210906)	+	L1PA16	LINE/L1	926	6629	(157)	1784133
1994	13.0	6.6	2.2	chr18	70162380	70162742	(10210543)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	1784135
5748	11.6	1.3	2.5	chr18	70162743	70162898	(10210387)	+	L1PA16	LINE/L1	6630	6786	(0)	1784133
5487	11.7	1.4	0.8	chr18	70695910	70696319	(9676966)	C	L1PA16	LINE/L1	(4)	6162	5750	1784982
2475	11.6	1.1	0.8	chr18	70696320	70696693	(9676592)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1784983
1488	28.2	8.0	7.8	chr18	71444136	71444576	(8928709)	+	L1MEc	LINE/L1	260	715	(5685)	1785946
2493	10.3	1.3	1.6	chr18	71444577	71444952	(8928333)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1785948
1488	28.2	8.0	7.8	chr18	71444953	71444969	(8928316)	+	L1MEc	LINE/L1	716	729	(5671)	1785946
1597	17.4	6.6	1.4	chr18	71444970	71445256	(8928029)	C	AluJb	SINE/Alu	(9)	303	1	1785949
684	28.7	8.7	2.2	chr18	74333168	74333368	(6039917)	C	LTR79	LTR/ERVL	(178)	349	124	1789730
2544	12.2	1.3	0.0	chr18	74333369	74333738	(6039547)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1789731
2281	11.8	5.3	0.0	chr18	78951690	78952044	(1421241)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1795020
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
12	16.3	7.0	2.2	chr18	79988584	79988626	(384659)	+	(CGTG)n	Simple_repeat	1	46	(0)	1795993
431	25.0	7.5	1.2	chr18	79988965	79989126	(384159)	+	MER65C	LTR/ERV1	1	173	(288)	1795994
1741	17.6	1.9	2.2	chr18	80056627	80056835	(316450)	C	AluJr4	SINE/Alu	(1)	311	100	1796081
2082	12.8	7.9	0.8	chr18	80056836	80057189	(316096)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1796082
1741	17.6	1.9	2.2	chr18	80057190	80057291	(315994)	C	AluJr4	SINE/Alu	(213)	99	1	1796081
253	30.7	5.0	0.9	chr19	2274103	2274217	(56343399)	C	L2c	LINE/L2	(245)	3142	3023	1800447
2304	9.7	0.0	0.0	chr19	2378438	2378726	(56238890)	+	AluSx4	SINE/Alu	1	289	(21)	1800653
2471	10.6	2.1	4.7	chr19	2378727	2379068	(56238548)	C	THE1C	LTR/ERVL-MaLR	(40)	335	1	1800652
15	21.2	0.0	4.3	chr19	3036342	3036388	(55581228)	+	(CTCC)n	Simple_repeat	1	47	(0)	1802227
251	28.4	0.8	0.3	chr19	4197343	4198009	(54419607)	+	(AATG)n	Simple_repeat	1	672	(0)	1805012
14	20.6	6.2	5.8	chr19	4198298	4198378	(54419238)	+	G-rich	Low_complexity	1	86	(0)	1805013
17	31.5	2.6	0.0	chr19	8609153	8609230	(50008386)	+	(TGTGTG)n	Simple_repeat	1	80	(0)	1815704
29	0.0	0.0	0.0	chr19	8609235	8609259	(50008357)	+	(TG)n	Simple_repeat	1	25	(0)	1815705
2240	10.1	4.5	3.2	chr19	11605368	11605737	(47011879)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1822780
313	26.1	6.2	1.3	chr19	15530336	15530483	(43087133)	+	L2c	LINE/L2	3084	3252	(123)	1832024
2440	9.4	3.7	0.8	chr19	15530526	15530889	(43086727)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1832025
2337	11.0	0.8	3.4	chr19	16770134	16770518	(41847098)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1834727
375	29.7	2.8	9.8	chr19	16770524	16770717	(41846899)	+	MIR	SINE/MIR	21	200	(62)	1834728
246	24.4	19.5	1.0	chr19	17305318	17305428	(41312188)	C	MIR3	SINE/MIR	(102)	166	31	1835989
194	30.9	1.8	0.0	chr19	33011951	33012005	(25605611)	+	MIR3	SINE/MIR	15	70	(138)	1855943
2173	13.5	0.6	1.3	chr19	33012030	33012340	(25605276)	C	AluSx	SINE/Alu	(2)	310	2	1855944
649	27.3	4.0	15.9	chr19	33308551	33308618	(25308998)	C	Charlie22a	DNA/hAT-Charlie	(227)	264	219	1856563
2266	13.0	3.4	3.9	chr19	33308619	33309001	(25308615)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1856565
649	27.3	4.0	15.9	chr19	33309002	33309099	(25308517)	C	Charlie22a	DNA/hAT-Charlie	(273)	218	141	1856563
11	13.2	5.7	2.7	chr19	34772894	34772928	(23844688)	+	G-rich	Low_complexity	1	37	(0)	1859111
578	18.4	1.2	2.2	chr19	39041029	39041185	(19576431)	+	LOR1-int	LTR/ERV1	1552	1666	(6454)	1868083
1458	11.3	0.9	2.1	chr19	39041186	39041409	(19576207)	C	THE1C	LTR/ERVL-MaLR	(0)	375	153	1868084
2110	12.5	0.7	2.2	chr19	39041410	39041721	(19575895)	+	AluSz	SINE/Alu	1	307	(5)	1868085
429	28.0	24.7	1.5	chr19	41321456	41321812	(17295804)	C	L2a	LINE/L2	(0)	3426	2944	1873149
286	22.5	15.8	7.4	chr19	41321887	41322035	(17295581)	C	MER20	DNA/hAT-Charlie	(55)	164	1	1873150
1745	15.0	1.7	0.7	chr19	41322106	41322391	(17295225)	C	AluJo	SINE/Alu	(23)	289	1	1873151
31	0.0	0.0	0.0	chr19	42370844	42370872	(16246744)	+	(G)n	Simple_repeat	1	29	(0)	1875128
766	29.6	9.3	6.9	chr19	43701271	43701659	(14915957)	C	L2a	LINE/L2	(3)	3423	3025	1877470
1013	15.8	0.0	6.6	chr19	43701680	43701862	(14915754)	+	AluJr	SINE/Alu	1	171	(141)	1877471
2002	5.9	0.0	3.5	chr19	43701863	43702116	(14915500)	+	AluY	SINE/Alu	67	311	(0)	1877472
362	28.8	6.0	2.5	chr19	43950771	43950930	(14666686)	+	L2	LINE/L2	632	797	(2622)	1877971
725	28.9	6.9	2.4	chr19	44140935	44141225	(14476391)	+	L2	LINE/L2	468	772	(2647)	1878265
399	30.1	4.3	3.8	chr19	44715463	44715508	(13902108)	C	MIR	SINE/MIR	(0)	262	221	1879414
2032	12.6	16.6	0.8	chr19	44715509	44715868	(13901748)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1879415
399	30.1	4.3	3.8	chr19	44715869	44716004	(13901612)	C	MIR	SINE/MIR	(42)	220	79	1879414
36	0.0	0.0	0.0	chr19	45496963	45496995	(13120621)	+	(GCC)n	Simple_repeat	1	33	(0)	1881467
2276	11.4	0.0	1.0	chr19	45538438	45538743	(13078873)	+	AluSz	SINE/Alu	1	303	(9)	1881573
930	24.8	0.9	2.7	chr19	45538744	45538862	(13078754)	+	L1MB8	LINE/L1	5392	5509	(675)	1881565
2176	10.6	8.4	0.8	chr19	45538863	45539214	(13078402)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1881574
930	24.8	0.9	2.7	chr19	45539215	45539314	(13078302)	+	L1MB8	LINE/L1	5510	5607	(577)	1881565
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
1008	16.2	5.0	1.6	chr19	56076280	56076473	(2541143)	+	L1MB5	LINE/L1	5961	6161	(13)	1905058
600	28.6	3.5	0.2	chr19	56077135	56077486	(2540130)	+	MLT1I	LTR/ERVL-MaLR	9	404	(7)	1905059
1474	9.1	13.3	0.8	chr19	57526745	57526987	(1090629)	C	MER4B	LTR/ERV1	(328)	282	5	1907945
2060	6.1	3.6	3.2	chr19	57819208	57819513	(798103)	C	AluY	SINE/Alu	(0)	311	1	1908382
2441	6.8	0.0	3.4	chr19	57916811	57917132	(700484)	+	AluYm1	SINE/Alu	1	311	(0)	1908540
1248	20.9	14.0	9.8	chr2	898218	898674	(241294855)	C	MER66D	LTR/ERV1	(5)	479	1	1911696
325	30.3	1.1	0.0	chr2	898680	898768	(241294761)	+	L1M5	LINE/L1	3904	3993	(2153)	1911693
1288	20.6	6.2	3.9	chr2	1807680	1807826	(240385703)	C	Tigger17a	DNA/TcMar-Tigger	(0)	654	500	1912541
2626	10.3	2.1	0.0	chr2	1807827	1808193	(240385336)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1912542
1288	20.6	6.2	3.9	chr2	1808194	1808378	(240385151)	C	Tigger17a	DNA/TcMar-Tigger	(155)	499	314	1912541
2378	9.2	1.9	0.0	chr2	3349842	3350144	(238843385)	+	AluSx	SINE/Alu	1	309	(3)	1914348
1915	15.0	12.6	3.9	chr2	3350145	3350491	(238843038)	C	MSTA	LTR/ERVL-MaLR	(33)	395	1	1914347
2631	10.2	1.1	1.6	chr2	8715892	8716268	(233477261)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1921779
2142	13.8	5.1	1.7	chr2	9678589	9678950	(232514579)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1923424
756	27.1	1.5	3.4	chr2	10412201	10412406	(231781123)	+	MER105	DNA/hAT-Charlie	1	202	(1)	1924725
979	29.1	3.4	6.5	chr2	10412407	10412660	(231780869)	C	MLT1J2	LTR/ERVL-MaLR	(179)	269	31	1924724
2182	11.7	0.0	0.7	chr2	11441235	11441533	(230751996)	+	AluSz	SINE/Alu	1	297	(15)	1926655
2616	8.8	2.7	1.6	chr2	11441606	11441976	(230751553)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1926656
9791	10.7	6.9	1.2	chr2	11441977	11443465	(230750064)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1926656
1920	15.8	6.4	1.1	chr2	12942283	12942635	(229250894)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	1929139
655	29.1	8.0	3.6	chr2	15623860	15624370	(226569159)	+	L1MEd	LINE/L1	1935	2486	(3660)	1933023
2246	10.4	10.4	0.0	chr2	15624372	15624707	(226568822)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1933024
13	19.6	0.0	0.0	chr2	21595770	21595799	(220597730)	+	(TAGA)n	Simple_repeat	1	30	(0)	1941958
22	40.4	0.0	0.8	chr2	21595785	21595824	(220597705)	+	(ATAT)n	Simple_repeat	1	40	(0)	1941959
36	0.0	0.0	0.0	chr2	21595825	21595855	(220597674)	+	(AC)n	Simple_repeat	1	31	(0)	1941960
2377	11.4	3.8	0.3	chr2	21595856	21596214	(220597315)	+	THE1C	LTR/ERVL-MaLR	2	373	(2)	1941961
22	40.4	0.0	0.8	chr2	21596215	21596303	(220597226)	+	(ATAT)n	Simple_repeat	1	89	(0)	1941962
21	21.1	0.0	0.0	chr2	25340723	25340771	(216852758)	+	(GTGCGT)n	Simple_repeat	1	49	(0)	1947753
14	23.1	2.1	2.1	chr2	25340887	25340933	(216852596)	+	(CCG)n	Simple_repeat	1	48	(0)	1947754
19	16.1	3.9	1.9	chr2	25341040	25341090	(216852439)	+	(CCCCG)n	Simple_repeat	1	53	(0)	1947755
16	19.7	2.1	2.0	chr2	25341189	25341236	(216852293)	+	G-rich	Low_complexity	1	49	(0)	1947756
2527	11.7	1.3	0.0	chr2	32565640	32566007	(209627522)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	1960528
255	20.7	6.5	1.1	chr2	32566008	32566026	(209627503)	C	L1ME4b	LINE/L1	(198)	694	673	1960527
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
1132	28.1	5.5	4.7	chr2	32945743	32946209	(209247320)	+	Charlie22a	DNA/hAT-Charlie	1	471	(20)	1961243
2155	12.9	10.2	0.8	chr2	38126392	38126773	(204066756)	+	MSTA	LTR/ERVL-MaLR	4	425	(3)	1968729
10799	11.8	3.7	0.3	chr2	38126777	38128351	(204065178)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	1968729
1936	14.7	7.7	9.0	chr2	38587756	38588189	(203605340)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1969516
1891	18.1	1.6	0.7	chr2	39204897	39205200	(202988329)	+	AluJr	SINE/Alu	1	307	(5)	1970781
2381	12.5	2.1	0.8	chr2	39442851	39443220	(202750309)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1971205
368	27.2	4.2	15.9	chr2	39443343	39443432	(202750097)	C	MamTip3	DNA/hAT-Tip100	(1)	499	425	1971206
1797	19.1	0.3	0.7	chr2	39443433	39443725	(202749804)	C	AluJb	SINE/Alu	(20)	292	1	1971207
781	26.5	4.0	0.5	chr2	41925236	41925455	(200268074)	C	MIRb	SINE/MIR	(15)	253	26	1974654
2639	9.2	1.9	0.3	chr2	41925481	41925849	(200267680)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1974655
2939	25.5	10.3	3.8	chr2	42413286	42413585	(199779944)	C	L1MEi	LINE/L1	(21)	2191	1869	1975502
2723	9.6	2.4	0.3	chr2	42413586	42413950	(199779579)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	1975503
2939	25.9	10.2	3.9	chr2	42413951	42415100	(199778429)	C	L1MEi	LINE/L1	(5179)	1924	696	1975502
241	28.7	5.0	2.5	chr2	53363943	53364060	(188829469)	+	L1M5	LINE/L1	5575	5695	(429)	1992486
2452	11.8	2.7	0.0	chr2	53364089	53364453	(188829076)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1992487
2549	12.9	0.5	0.0	chr2	59333788	59334160	(182859369)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2000989
295	14.7	0.0	0.8	chr2	65227315	65227374	(176966155)	+	L1MC4a	LINE/L1	6681	6725	(1157)	2010876
2760	11.0	0.3	1.6	chr2	67720739	67721118	(174472411)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2014454
225	33.3	5.6	1.5	chr2	69741254	69741390	(172452139)	C	L2c	LINE/L2	(4)	3383	3241	2017655
2127	12.2	7.1	1.1	chr2	72264603	72264960	(169928569)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2021816
1959	8.1	0.4	1.1	chr2	72264965	72265239	(169928290)	+	THE1D-int	LTR/ERVL-MaLR	5	277	(1354)	2021816
202	38.8	7.9	2.8	chr2	73991891	73992142	(168201387)	+	L3	LINE/CR1	2103	2368	(1731)	2024587
2411	10.3	0.0	0.0	chr2	73992302	73992613	(168200916)	C	AluSx	SINE/Alu	(0)	312	1	2024593
2344	18.5	1.3	1.7	chr2	80172572	80173038	(162020491)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	3	2033367
792	14.9	5.7	5.1	chr2	80173039	80173102	(162020427)	+	MER5A1	DNA/hAT-Charlie	97	162	(4)	2033366
15	16.9	10.6	0.0	chr2	85539084	85539130	(156654399)	+	(GC)n	Simple_repeat	1	52	(0)	2040998
12	16.6	4.5	4.3	chr2	85539144	85539187	(156654342)	+	(CCGCG)n	Simple_repeat	1	46	(0)	2040999
2423	11.1	8.9	2.3	chr2	86520189	86520585	(155672944)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	2042774
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
1595	20.1	6.3	4.3	chr2	96415608	96416029	(145777500)	+	MER31A	LTR/ERV1	46	476	(9)	2052115
2593	11.0	0.3	1.8	chr2	96416064	96416444	(145777085)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2052116
539	22.1	6.2	3.5	chr2	96416467	96416607	(145776922)	+	MER31-int	LTR/ERV1	13	157	(4779)	2052115
2308	9.4	7.9	0.8	chr2	96425739	96426092	(145767437)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2052127
2655	21.5	3.5	10.6	chr2	96426093	96426961	(145766568)	+	MER31-int	LTR/ERV1	1824	2630	(2306)	2052126
2277	12.9	11.2	0.8	chr2	98290049	98290431	(143903098)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2054797
2319	11.0	5.9	1.7	chr2	100420490	100420848	(141772681)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2057854
3070	21.3	5.3	4.7	chr2	100420849	100421563	(141771966)	+	MER21C	LTR/ERVL	152	872	(66)	2057853
2763	8.1	1.1	0.3	chr2	101187713	101188084	(141005445)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2059133
4025	10.1	2.3	2.7	chr2	101905523	101905946	(140287583)	+	MER51C	LTR/ERV1	1	412	(228)	2060337
2520	11.3	0.8	2.4	chr2	101905947	101906327	(140287202)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2060338
10443	11.6	2.8	1.3	chr2	101906328	101907882	(140285647)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	2060338
266	25.7	9.6	1.7	chr2	102143520	102143634	(140049895)	C	MIRc	SINE/MIR	(27)	241	117	2060702
573	14.7	0.9	0.9	chr2	120243691	120243800	(121949729)	+	MER53	DNA/hAT	1	110	(83)	2086646
1995	13.9	12.6	0.8	chr2	120243898	120244274	(121949255)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2086647
1877	13.3	0.3	2.3	chr2	121650282	121650581	(120542948)	C	AluJb	SINE/Alu	(18)	294	1	2089036
212	27.9	1.6	7.6	chr2	133435351	133435416	(108758113)	C	AmnSINE1	SINE/5S-Deu-L2	(80)	495	434	2105939
13	21.4	3.9	3.7	chr2	133435557	133435608	(108757921)	+	GA-rich	Low_complexity	1	54	(0)	2105940
278	18.2	0.0	0.0	chr2	133435706	133435760	(108757769)	+	MER3	DNA/hAT-Charlie	150	204	(5)	2105941
1571	16.8	2.6	0.4	chr2	135020336	135020597	(107172932)	C	AluJr	SINE/Alu	(28)	284	17	2108311
2245	10.6	5.3	1.1	chr2	135020598	135020959	(107172570)	+	THE1D	LTR/ERVL-MaLR	4	381	(0)	2108312
728	30.7	11.2	4.3	chr2	142629045	142629420	(99564109)	C	L1ME3Cz	LINE/L1	(4979)	2124	1728	2119025
2394	13.5	1.3	0.8	chr2	142629421	142629793	(99563736)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2119030
728	30.7	11.2	4.3	chr2	142629794	142630316	(99563213)	C	L1ME3Cz	LINE/L1	(5376)	1727	1155	2119025
2424	12.9	0.8	0.0	chr2	144964341	144964712	(97228817)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2122063
3183	22.5	3.5	0.3	chr2	145342303	145343020	(96850509)	+	L1MD2	LINE/L1	5602	6343	(16)	2122546
2031	14.4	3.0	1.2	chr2	145343032	145343361	(96850168)	+	THE1C	LTR/ERVL-MaLR	1	336	(39)	2122547
23	12.9	3.6	3.5	chr2	145343437	145343491	(96850038)	+	A-rich	Low_complexity	1	57	(0)	2122548
1661	14.6	15.0	1.6	chr2	146093153	146093520	(96100009)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	2123474
9985	15.0	1.0	1.1	chr2	146093521	146095153	(96098376)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	2123474
2545	10.7	2.4	1.1	chr2	149171992	149172361	(93021168)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2127715
1849	14.1	8.7	1.4	chr2	150279160	150279512	(91914017)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2129143
15	12.8	2.8	2.7	chr2	150279631	150279666	(91913863)	+	(TATCC)n	Simple_repeat	1	37	(0)	2129144
238	14.8	20.8	0.0	chr2	153537512	153537572	(88655957)	+	MER39B	LTR/ERV1	1	77	(576)	2133843
2353	13.8	0.8	0.0	chr2	153537574	153537942	(88655587)	+	THE1C	LTR/ERVL-MaLR	4	375	(0)	2133844
2381	9.7	3.0	0.0	chr2	153537947	153538306	(88655223)	+	THE1C-int	LTR/ERVL-MaLR	5	375	(1256)	2133844
2365	13.0	1.3	1.9	chr2	157360750	157361126	(84832403)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2138651
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
18	11.1	2.3	4.5	chr2	163733858	163733900	(78459629)	+	(TTCT)n	Simple_repeat	1	44	(0)	2147383
18	0.0	0.0	0.0	chr2	163733943	163733962	(78459567)	+	(A)n	Simple_repeat	1	20	(0)	2147384
7882	11.4	0.6	0.4	chr2	163866388	163867606	(78325923)	+	L1PA13	LINE/L1	4186	5408	(755)	2147547
2468	11.3	0.8	2.6	chr2	163867607	163867988	(78325541)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2147548
6033	10.7	0.7	1.3	chr2	163867989	163868741	(78324788)	+	L1PA13	LINE/L1	5409	6158	(5)	2147547
2772	16.9	6.6	5.5	chr2	171804561	171804629	(70388900)	+	L1MB8	LINE/L1	5919	5983	(195)	2159048
1549	20.5	1.9	0.0	chr2	171804630	171804892	(70388637)	+	AluJr4	SINE/Alu	1	268	(44)	2159052
2772	16.9	6.6	5.5	chr2	171804893	171805080	(70388449)	+	L1MB8	LINE/L1	5984	6173	(5)	2159048
2441	10.9	2.1	4.7	chr2	172379535	172379759	(69813770)	C	THE1C	LTR/ERVL-MaLR	(0)	375	165	2160078
2365	8.2	0.0	1.3	chr2	172379760	172380062	(69813467)	+	AluY	SINE/Alu	1	299	(12)	2160079
2192	11.9	6.1	0.6	chr2	174163907	174164260	(68029269)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2162808
2770	9.4	0.0	1.1	chr2	174921558	174921935	(67271594)	C	THE1C	LTR/ERVL-MaLR	(1)	374	1	2164015
2535	11.6	3.2	1.1	chr2	175014501	175014867	(67178662)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2164176
15	15.1	2.6	2.5	chr2	177213180	177213218	(64980311)	+	G-rich	Low_complexity	1	40	(0)	2167293
6415	13.2	3.7	2.9	chr2	179454181	179455268	(62738261)	+	Tigger3b	DNA/TcMar-Tigger	1	1097	(134)	2170190
2522	10.5	0.0	5.1	chr2	179455269	179455608	(62737921)	+	THE1C	LTR/ERVL-MaLR	3	328	(47)	2170191
2049	11.3	4.9	1.4	chr2	179455609	179455901	(62737628)	+	AluSz	SINE/Alu	1	304	(8)	2170192
2522	10.5	0.0	5.1	chr2	179455902	179455952	(62737577)	+	THE1C	LTR/ERVL-MaLR	329	374	(1)	2170191
549	33.7	6.0	8.1	chr2	180595581	180595874	(61597655)	C	MLT1F2	LTR/ERVL-MaLR	(274)	286	1	2171653
457	29.6	6.9	3.6	chr2	180595878	180595965	(61597564)	C	LTR16C	LTR/ERVL	(120)	369	273	2171655
2344	12.4	2.9	2.4	chr2	180595966	180596338	(61597191)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2171656
1909	16.7	3.9	5.2	chr2	183225846	183226231	(58967298)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2175133
2211	11.7	5.8	2.2	chr2	186518344	186518710	(55674819)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2179153
2056	24.1	13.9	12.2	chr2	186518711	186519046	(55674483)	C	L1MD	LINE/L1	(1596)	4550	4175	2179152
2201	15.6	0.5	1.6	chr2	189494973	189495349	(52698180)	+	THE1C	LTR/ERVL-MaLR	3	375	(0)	2182918
1049	19.4	8.8	1.2	chr2	190257605	190257943	(51935586)	C	MSTD	LTR/ERVL-MaLR	(0)	408	15	2184054
2192	13.6	12.6	0.8	chr2	190258001	190258377	(51935152)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2184055
2609	26.5	8.0	2.1	chr2	190536174	190537286	(51656243)	+	L1MCc	LINE/L1	463	1860	(5177)	2184504
2117	8.4	5.2	0.1	chr2	190537287	190537612	(51655917)	+	THE1C	LTR/ERVL-MaLR	2	368	(28)	2184505
2821	9.1	0.0	1.3	chr2	190862228	190862607	(51330922)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2185036
753	32.3	12.2	7.2	chr2	194695195	194695717	(47497812)	C	MLT2F	LTR/ERVL	(0)	663	136	2189983
2653	10.2	0.3	1.3	chr2	194695718	194696096	(47497433)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2189984
21561	13.7	2.7	3.2	chr2	195975035	195980099	(46213430)	+	L1MA3	LINE/L1	17	5032	(2533)	2191729
2462	12.6	0.5	1.1	chr2	195980100	195980475	(46213054)	+	THE1C	LTR/ERVL-MaLR	2	375	(0)	2191730
18407	10.9	2.8	3.1	chr2	195980476	195983132	(46210397)	+	L1MA3	LINE/L1	5033	7724	(0)	2191729
2126	12.0	12.4	1.8	chr2	196734884	196735265	(45458264)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2192835
9447	10.7	8.9	0.5	chr2	199916382	199917828	(42275701)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	2197532
2312	10.9	4.6	0.6	chr2	199917829	199918186	(42275343)	C	THE1C	LTR/ERVL-MaLR	(0)	375	3	2197532
15	20.5	0.0	0.0	chr2	200812354	200812387	(41381142)	+	(CCG)n	Simple_repeat	1	34	(0)	2198904
17	23.1	0.0	3.7	chr2	201116576	201116629	(41076900)	+	(GCCCC)n	Simple_repeat	1	54	(0)	2199569
766	33.7	8.5	1.8	chr2	202429049	202429522	(39764007)	+	L2c	LINE/L2	2621	3128	(259)	2201985
1046	20.9	11.9	5.2	chr2	202429592	202429608	(39763921)	C	MLT1A	LTR/ERVL-MaLR	(4)	370	356	2201986
2613	8.9	5.8	0.8	chr2	202429609	202429970	(39763559)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2201987
1046	20.9	11.9	5.2	chr2	202429971	202430296	(39763233)	C	MLT1A	LTR/ERVL-MaLR	(19)	355	1	2201986
2178	14.9	1.1	1.9	chr2	205049164	205049540	(37143989)	C	THE1C	LTR/ERVL-MaLR	(0)	375	2	2206401
1818	17.9	3.3	0.0	chr2	207640150	207640474	(34553055)	+	MSTA	LTR/ERVL-MaLR	93	428	(0)	2210381
2433	10.2	6.1	0.3	chr2	207640501	207640853	(34552676)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2210382
1655	25.1	16.4	3.6	chr2	211099903	211100254	(31093275)	+	L1M5	LINE/L1	4182	4550	(1596)	2215152
1801	16.4	7.5	0.6	chr2	211100255	211100603	(31092926)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2215153
2059	14.7	4.0	1.9	chr2	213712881	213713247	(28480282)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2218591
1526	11.7	18.9	0.6	chr2	215374350	215374660	(26818869)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2220998
2364	14.4	2.1	1.9	chr2	215853528	215853901	(26339628)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2221737
10565	13.7	3.5	0.7	chr2	215853902	215855436	(26338093)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2221737
2100	13.5	5.3	1.4	chr2	216940989	216941348	(25252181)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2223685
9817	12.3	3.9	1.4	chr2	220404872	220406410	(21787119)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	2229499
2006	16.1	3.5	0.8	chr2	220406411	220406773	(21786756)	C	THE1C	LTR/ERVL-MaLR	(0)	375	3	2229499
3215	13.0	0.2	2.8	chr2	220406774	220406795	(21786734)	C	L1PREC2	LINE/L1	(508)	6179	6160	2229498
29	0.0	0.0	0.0	chr2	220406806	220406830	(21786699)	+	(TG)n	Simple_repeat	1	25	(0)	2229500
1575	10.4	1.3	4.3	chr2	220406832	220407062	(21786467)	C	AluSp	SINE/Alu	(5)	308	85	2229501
2193	10.1	0.7	0.0	chr2	220916612	220916922	(21276607)	C	AluSc	SINE/Alu	(0)	309	1	2230259
2049	11.7	5.5	6.2	chr2	220916923	220917262	(21276267)	+	THE1D	LTR/ERVL-MaLR	31	380	(1)	2230258
2455	13.0	1.3	0.0	chr2	222362919	222363288	(19830241)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2232477
2833	9.1	0.5	0.3	chr2	224869989	224870362	(17323167)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2236674
2841	8.4	0.8	2.1	chr2	230936237	230936615	(11256914)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	2245932
2615	10.7	2.7	0.8	chr2	234866419	234866786	(7326743)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2252679
2636	13.9	3.5	1.0	chr2	235624695	235625109	(6568420)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2253911
314	36.5	2.9	1.7	chr2	236504528	236504628	(5688901)	+	MIRc	SINE/MIR	93	196	(72)	2255091
2644	10.0	1.3	1.1	chr2	236504629	236505002	(5688527)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2255092
22	7.4	0.0	0.0	chr2	236890305	236890333	(5303196)	+	(TG)n	Simple_repeat	1	29	(0)	2255639
2827	8.7	1.3	0.0	chr2	236890612	236890981	(5302548)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2255640
1290	25.9	1.6	4.6	chr2	238979302	238979629	(3213900)	C	L1ME3B	LINE/L1	(864)	5282	4957	2258453
1246	25.2	10.4	8.2	chr2	238979634	238980207	(3213322)	C	MLT1G3	LTR/ERVL-MaLR	(5)	590	3	2258455
669	31.9	0.8	0.0	chr2	238980213	238980453	(3213076)	C	L1ME3B	LINE/L1	(1188)	4958	4716	2258453
245	35.0	1.9	1.0	chr2	239734016	239734119	(2459410)	+	MIR3	SINE/MIR	33	137	(71)	2259262
2658	9.7	2.7	0.8	chr2	239734158	239734522	(2459007)	C	THE1C	LTR/ERVL-MaLR	(0)	375	4	2259263
1067	26.2	14.9	10.3	chr2	240219858	240220688	(1972841)	C	HAL1	LINE/L1	(0)	2507	1632	2259825
15	16.6	0.0	2.8	chr2	241636897	241636932	(556597)	+	G-rich	Low_complexity	1	36	(0)	2261470
14	22.1	3.6	3.5	chr2	241637029	241637084	(556445)	+	(GCCC)n	Simple_repeat	1	58	(0)	2261471
20	12.1	0.0	0.0	chr2	241637183	241637218	(556311)	+	(CCCGCC)n	Simple_repeat	1	36	(0)	2261472
1184	23.7	9.7	1.4	chr20	2730125	2730547	(61713620)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	2267496
2322	11.0	0.0	0.0	chr20	2730896	2731196	(61712971)	C	AluSc	SINE/Alu	(8)	301	1	2267497
804	28.6	9.2	7.2	chr20	19569489	19569986	(44874181)	+	LTR33	LTR/ERVL	7	515	(0)	2294317
2001	14.3	13.3	0.8	chr20	19570010	19570383	(44873784)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2294318
758	15.6	0.0	3.3	chr20	25627849	25627970	(38816197)	C	AluJb	SINE/Alu	(9)	303	186	2302507
1276	17.4	8.7	6.8	chr20	25628008	25628333	(38815834)	C	THE1D	LTR/ERVL-MaLR	(48)	333	1	2302508
471	31.9	3.7	2.7	chr20	25628350	25628536	(38815631)	C	MLT1J2	LTR/ERVL-MaLR	(18)	430	242	2302509
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
410	25.2	14.9	2.7	chr20	32660495	32660641	(31783526)	C	MIRb	SINE/MIR	(21)	247	80	2308943
2775	10.4	0.3	0.3	chr20	32660684	32661058	(31783109)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2308944
373	30.9	7.5	0.7	chr20	32661199	32661335	(31782832)	C	L2b	LINE/L2	(1)	3374	3228	2308945
1401	26.4	5.0	1.4	chr20	44749553	44749974	(19694193)	C	L1ME1	LINE/L1	(15)	6164	5727	2334254
2640	8.6	3.5	0.0	chr20	46684316	46684677	(17759490)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2338216
2269	11.7	3.5	3.2	chr20	48089762	48090133	(16354034)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	2341428
530	6.7	2.6	0.0	chr20	48090134	48090208	(16353959)	C	MADE1	DNA/TcMar-Mariner	(0)	80	4	2341429
1174	25.7	9.8	2.7	chr20	48090209	48090384	(16353783)	+	L2a	LINE/L2	3248	3425	(1)	2341427
2635	8.2	5.6	1.1	chr20	52431316	52431673	(12012494)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2351503
2168	13.5	3.2	3.5	chr20	53236635	53237010	(11207157)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2353066
332	31.7	4.0	3.2	chr20	53237011	53237134	(11207033)	+	MIR	SINE/MIR	90	215	(15)	2353065
748	31.4	12.6	4.3	chr20	60035062	60035625	(4408542)	C	L1MC4a	LINE/L1	(1992)	5890	5269	2365376
1940	14.5	6.1	1.7	chr20	60035626	60035983	(4408184)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2365377
748	31.4	12.6	4.3	chr20	60035984	60036000	(4408167)	C	L1MC4a	LINE/L1	(2614)	5268	5254	2365376
28	6.0	0.0	0.0	chr20	60036068	60036102	(4408065)	+	(A)n	Simple_repeat	1	35	(0)	2365378
2256	13.4	2.4	1.6	chr20	62152967	62153338	(2290829)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2368202
345	29.4	1.0	0.0	chr20	62166059	62166160	(2278007)	C	MER63A	DNA/hAT-Blackjack	(70)	140	38	2368212
640	18.4	10.7	0.0	chr20	62166344	62166501	(2277666)	C	LTR55	LTR/ERVL?	(321)	227	51	2368213
1226	27.1	4.7	3.4	chr20	63514210	63514489	(929678)	C	L1MB7	LINE/L1	(1438)	4968	4592	2369639
2128	11.8	13.1	4.9	chr20	63514490	63514774	(929393)	C	MSTA	LTR/ERVL-MaLR	(0)	428	110	2369650
2462	7.5	0.0	2.8	chr20	63514775	63515094	(929073)	+	AluSx3	SINE/Alu	1	311	(0)	2369651
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
800	10.7	0.6	0.5	chr21	9096388	9100565	(37609418)	+	CER	Satellite	1	4180	(0)	2374227
1786	19.0	1.0	0.3	chr21	9113619	9113923	(37596060)	+	AluJb	SINE/Alu	1	307	(5)	2374250
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
1752	15.1	2.9	1.0	chr21	22370727	22371027	(24338956)	C	THE1D	LTR/ERVL-MaLR	(74)	307	1	2388229
217	30.7	15.4	0.0	chr21	26498348	26498484	(20211499)	C	L2c	LINE/L2	(244)	3143	2982	2394094
2710	10.2	0.5	0.0	chr21	26498635	26499007	(20210976)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2394095
848	24.1	10.0	6.6	chr21	26499117	26499542	(20210441)	+	MLT1C	LTR/ERVL-MaLR	16	467	(0)	2394096
190	26.0	0.0	0.0	chr21	26799198	26799247	(19910736)	C	L2a	LINE/L2	(1)	3425	3376	2394524
383	31.4	1.3	3.1	chr21	26799371	26799531	(19910452)	+	Charlie4z	DNA/hAT-Charlie	2	159	(8)	2394525
2394	21.2	3.4	0.2	chr21	30484817	30485293	(16224690)	+	MLT2B1	LTR/ERVL	1	493	(27)	2399841
1879	16.6	9.8	0.8	chr21	30485294	30485682	(16224301)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2399842
9401	14.5	0.7	1.0	chr21	30485683	30487147	(16222836)	+	MSTA-int	LTR/ERVL-MaLR	1	1460	(171)	2399842
563	30.7	2.8	2.8	chr21	31610875	31611031	(15098952)	C	MIR	SINE/MIR	(102)	160	2	2401729
2251	15.5	1.6	1.1	chr21	31611426	31611797	(15098186)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	2401731
1951	17.1	1.1	0.0	chr21	31611943	31612293	(15097690)	C	L1MB3	LINE/L1	(0)	6183	5829	2401732
2503	11.1	1.6	1.6	chr21	32250845	32251219	(14458764)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2402898
12	23.7	2.5	0.0	chr21	32772205	32772244	(13937739)	+	GA-rich	Low_complexity	1	41	(0)	2403729
2361	11.9	5.6	1.7	chr21	35535936	35536295	(11173688)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2408258
1863	15.8	1.9	2.2	chr21	37342093	37342255	(9367728)	+	AluJb	SINE/Alu	1	166	(146)	2411422
2663	11.0	0.3	1.1	chr21	37342256	37342633	(9367350)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2411423
2561	10.5	1.1	0.5	chr21	38635943	38636315	(8073668)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2413271
2489	8.6	7.2	0.3	chr21	38950206	38950554	(7759429)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2413760
2646	10.5	1.3	0.5	chr21	39466468	39466839	(7243144)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2414650
253	31.8	4.1	5.7	chr21	39466840	39467051	(7242932)	C	L1ME4b	LINE/L1	(904)	5242	5038	2414647
21	23.4	5.6	2.1	chr21	42010422	42010510	(4699473)	+	G-rich	Low_complexity	1	94	(0)	2418307
15	11.2	3.3	0.0	chr21	42481865	42481894	(4228089)	+	(AATGTT)n	Simple_repeat	1	31	(0)	2418939
14	10.1	3.9	9.3	chr21	42818325	42818376	(3891607)	+	(TCTTCC)n	Simple_repeat	1	54	(0)	2419384
822	24.6	10.2	2.9	chr21	42818562	42818833	(3891150)	+	MLT1A	LTR/ERVL-MaLR	3	296	(78)	2419385
2539	5.7	0.3	1.6	chr21	46008001	46008315	(701668)	C	AluY	SINE/Alu	(0)	311	1	2423406
1967	13.4	7.9	4.9	chr21	46008316	46008632	(701351)	C	THE1D	LTR/ERVL-MaLR	(40)	341	1	2423405
2868	25.1	8.4	5.3	chr21	46085988	46086993	(622990)	+	L1M5	LINE/L1	3150	4188	(1958)	2423491
2447	13.4	0.5	2.1	chr21	46086994	46087374	(622609)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2423492
2868	25.1	8.4	5.3	chr21	46087375	46087509	(622474)	+	L1M5	LINE/L1	4189	4329	(1817)	2423491
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
2449	8.3	0.0	0.0	chr22	20047924	20048224	(30770244)	C	AluSq2	SINE/Alu	(12)	301	1	2432842
2637	8.2	1.9	3.7	chr22	20048225	20048440	(30770028)	+	THE1C	LTR/ERVL-MaLR	154	373	(2)	2432841
561	22.8	14.3	4.3	chr22	20048441	20048524	(30769944)	C	L1MEc	LINE/L1	(6266)	821	747	2432834
1477	27.7	9.5	3.5	chr22	20048542	20048645	(30769823)	C	L1M4	LINE/L1	(837)	5309	5167	2432843
208	19.4	0.0	0.0	chr22	21045593	21045628	(29772840)	+	MIRb	SINE/MIR	16	51	(217)	2434450
331	25.9	2.1	6.7	chr22	21046312	21046460	(29772008)	+	Charlie22a	DNA/hAT-Charlie	49	190	(301)	2434451
276	20.0	5.3	13.5	chr22	21953082	21953185	(28865283)	C	MIR	SINE/MIR	(129)	133	39	2436268
2496	6.7	0.0	0.3	chr22	25781328	25781625	(25036843)	+	AluY	SINE/Alu	1	297	(14)	2442841
311	20.1	10.4	7.1	chr22	28009686	28009824	(22808644)	+	L2a	LINE/L2	3240	3426	(0)	2447858
2098	13.8	0.0	0.0	chr22	32595795	32596090	(18222378)	+	AluSz	SINE/Alu	1	296	(16)	2457304
2160	13.4	11.0	3.8	chr22	32596091	32596305	(18222163)	+	MSTA	LTR/ERVL-MaLR	202	426	(2)	2457303
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
3100	7.8	8.8	10.3	chr22	36039568	36040113	(14778355)	C	THE1C-int	LTR/ERVL-MaLR	(1043)	537	1	2464205
1398	15.0	0.5	0.5	chr22	36040114	36040334	(14778134)	C	THE1C	LTR/ERVL-MaLR	(0)	375	155	2464205
329	32.0	2.0	0.0	chr22	38000216	38000312	(12818156)	C	MIR3	SINE/MIR	(6)	202	104	2468589
223	27.7	6.9	0.0	chr22	38000435	38000528	(12817940)	+	MIRc	SINE/MIR	163	263	(5)	2468590
16	19.6	3.6	3.5	chr22	38231000	38231055	(12587413)	+	(GAGACA)n	Simple_repeat	1	58	(0)	2469067
1804	18.3	0.3	0.0	chr22	40165187	40165475	(10652993)	C	AluJr	SINE/Alu	(22)	290	1	2473051
2686	10.5	1.1	0.3	chr22	40165565	40165936	(10652532)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2473052
2105	12.0	0.7	1.0	chr22	40345621	40345928	(10472540)	C	AluSx	SINE/Alu	(4)	308	2	2473375
870	11.4	0.0	2.3	chr22	40346118	40346272	(10472196)	C	FLAM_C	SINE/Alu	(0)	143	1	2473376
187	32.8	1.6	0.0	chr22	40346274	40346334	(10472134)	C	MIR	SINE/MIR	(102)	160	99	2473377
2490	12.4	3.2	0.0	chr22	40552411	40552773	(10265695)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2473784
10468	11.7	3.9	0.8	chr22	40552774	40554304	(10264164)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2473784
2724	1.0	0.0	0.0	chr22	40775437	40775762	(10042706)	C	AluYb8	SINE/Alu	(0)	318	1	2474326
2294	10.1	5.3	3.8	chr22	40775763	40775973	(10042495)	+	THE1C	LTR/ERVL-MaLR	165	374	(1)	2474325
725	30.7	14.2	1.2	chr22	40775974	40776306	(10042162)	+	L2a	LINE/L2	3043	3425	(1)	2474324
946	23.6	7.1	3.6	chr22	42863350	42863600	(7954868)	+	L1ME1	LINE/L1	5808	6078	(101)	2479109
2675	12.8	0.3	0.0	chr22	42863601	42863974	(7954494)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2479110
18	15.3	4.5	0.0	chr22	42962564	42962607	(7855861)	+	G-rich	Low_complexity	1	46	(0)	2479266
366	28.9	5.3	4.7	chr22	43028686	43028834	(7789634)	C	MIRb	SINE/MIR	(94)	174	25	2479410
1600	19.2	1.1	0.4	chr22	43563315	43563590	(7254878)	+	AluJb	SINE/Alu	31	308	(4)	2480441
14	8.1	3.9	0.0	chr22	43563656	43563681	(7254787)	+	(CTG)n	Simple_repeat	1	27	(0)	2480442
11279	10.0	3.2	0.8	chr22	43873747	43875289	(6943179)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2480919
2527	10.5	1.3	4.4	chr22	43875290	43875608	(6942860)	+	THE1C	LTR/ERVL-MaLR	1	315	(60)	2480919
2248	11.8	0.0	1.0	chr22	43875609	43875921	(6942547)	C	AluSx1	SINE/Alu	(2)	310	1	2480920
1220	13.1	3.7	1.4	chr22	45046997	45047205	(5771263)	+	MSTA	LTR/ERVL-MaLR	215	428	(0)	2483121
181	32.3	5.8	0.0	chr22	45309562	45309626	(5508842)	C	MIRb	SINE/MIR	(70)	198	130	2483678
15	10.0	2.9	2.9	chr22	45309983	45310022	(5508446)	+	(CGCTCT)n	Simple_repeat	1	40	(0)	2483679
1987	15.8	3.9	5.9	chr22	45467695	45468083	(5350385)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2483997
1065	19.3	9.2	1.2	chr22	45480458	45480714	(5337754)	+	L1MA9	LINE/L1	5820	6102	(210)	2484031
1832	13.3	12.2	3.0	chr22	45480746	45481116	(5337352)	+	MSTA	LTR/ERVL-MaLR	2	411	(17)	2484032
2345	8.2	0.3	0.0	chr22	46743385	46743677	(4074791)	+	AluY	SINE/Alu	4	297	(14)	2485983
2677	8.7	4.5	0.6	chr22	49394874	49395233	(1423235)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2489303
2724	8.8	0.3	5.3	chr22	50086974	50087368	(731100)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2490165
2182	12.4	0.0	0.7	chr3	4913310	4913599	(193381960)	+	AluSx3	SINE/Alu	1	288	(23)	2499782
1898	12.5	8.4	7.0	chr3	4913600	4913936	(193381623)	C	MSTA	LTR/ERVL-MaLR	(64)	364	11	2499780
536	20.0	1.1	1.9	chr3	5047626	5047744	(193247815)	C	MLT1I	LTR/ERVL-MaLR	(282)	162	50	2500076
2626	9.8	2.7	1.4	chr3	5047730	5048090	(193247469)	+	THE1C	LTR/ERVL-MaLR	10	375	(0)	2500077
676	26.4	8.9	0.5	chr3	5048153	5048369	(193247190)	C	MLT1L	LTR/ERVL-MaLR	(10)	600	364	2500078
13	8.1	3.6	3.5	chr3	14178454	14178481	(184117078)	+	(CCT)n	Simple_repeat	1	29	(0)	2516418
47	25.2	3.0	0.7	chr3	16392568	16392702	(181902857)	+	(TA)n	Simple_repeat	1	139	(0)	2520416
2340	11.4	1.9	1.1	chr3	17438325	17438696	(180856863)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2521866
2574	10.8	1.3	0.3	chr3	17950335	17950705	(180344854)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2522637
2300	9.4	5.2	1.9	chr3	22873579	22873946	(175421613)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2529297
2041	11.9	13.3	1.1	chr3	23467704	23468078	(174827481)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2530190
14	14.5	5.0	2.4	chr3	25427867	25427906	(172867653)	+	G-rich	Low_complexity	1	42	(0)	2533305
2208	14.1	1.9	3.7	chr3	28430608	28430989	(169864570)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2537747
2519	11.7	0.5	0.5	chr3	30408225	30408594	(167886965)	+	THE1C	LTR/ERVL-MaLR	6	375	(0)	2540500
302	29.8	4.7	2.4	chr3	30408595	30408718	(167886841)	+	L2a	LINE/L2	3290	3416	(10)	2540499
2292	11.1	0.0	0.3	chr3	32653873	32654170	(165641389)	+	AluSx	SINE/Alu	1	297	(15)	2544341
1119	12.8	8.8	14.1	chr3	32654171	32654379	(165641180)	+	MSTA	LTR/ERVL-MaLR	189	391	(37)	2544342
2346	8.9	0.0	1.0	chr3	32654380	32654682	(165640877)	C	AluSq2	SINE/Alu	(13)	300	1	2544343
39	22.4	4.3	2.8	chr3	32781872	32782009	(165513550)	+	(TTATT)n	Simple_repeat	1	144	(0)	2544654
2047	12.7	5.3	6.1	chr3	33499014	33499349	(164796210)	+	THE1C	LTR/ERVL-MaLR	1	338	(37)	2545967
2395	10.0	0.0	0.0	chr3	33499350	33499648	(164795911)	C	AluY	SINE/Alu	(12)	299	1	2545968
1341	14.9	2.0	0.4	chr3	38927335	38927583	(159367976)	+	L1MB2	LINE/L1	4509	4761	(1379)	2553707
1880	12.4	1.8	3.0	chr3	38927584	38927916	(159367643)	C	THE1C	LTR/ERVL-MaLR	(46)	329	1	2553708
13	4.5	0.0	7.4	chr3	43286331	43286357	(155009202)	+	(TCC)n	Simple_repeat	1	27	(0)	2560422
16	12.7	0.0	5.3	chr3	43286463	43286500	(155009059)	+	(CGCCC)n	Simple_repeat	1	38	(0)	2560423
311	34.8	8.1	5.9	chr3	43286717	43287040	(155008519)	+	L1M4b	LINE/L1	338	669	(6198)	2560424
284	22.2	14.7	1.0	chr3	52154092	52154191	(146141368)	+	L2b	LINE/L2	3242	3357	(18)	2575489
92	29.9	1.6	4.1	chr3	52410122	52410550	(145885009)	+	G-rich	Low_complexity	1	436	(0)	2575858
17	20.8	4.0	0.0	chr3	52685591	52685640	(145609919)	+	(CCGCC)n	Simple_repeat	1	52	(0)	2576289
28	27.3	4.0	2.3	chr3	52685752	52685875	(145609684)	+	(GCC)n	Simple_repeat	1	129	(0)	2576290
1703	18.2	13.9	10.8	chr3	54478639	54478968	(143816591)	+	MER44B	DNA/TcMar-Tigger	113	469	(81)	2579107
2863	8.7	1.3	4.2	chr3	54478969	54479354	(143816205)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2579109
1044	22.1	4.6	0.0	chr3	56551812	56552060	(141743499)	C	L1MC1	LINE/L1	(2)	6331	6071	2582343
2078	12.7	1.4	4.3	chr3	56552062	56552431	(141743128)	C	THE1C	LTR/ERVL-MaLR	(2)	373	15	2582344
4524	13.5	2.7	2.8	chr3	56552438	56552936	(141742623)	C	L1MC1	LINE/L1	(257)	6076	5586	2582343
2210	8.4	2.0	1.7	chr3	57693367	57693664	(140601895)	+	AluSx3	SINE/Alu	1	299	(12)	2584451
2515	9.5	4.8	1.6	chr3	58054402	58054764	(140240795)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2585287
2527	10.9	1.6	0.8	chr3	62443463	62443832	(135851727)	+	THE1C	LTR/ERVL-MaLR	3	375	(0)	2592274
558	21.0	0.0	5.3	chr3	71219319	71219449	(127076110)	+	Charlie5	DNA/hAT-Charlie	1	124	(2500)	2606890
2440	27.0	5.1	3.9	chr3	77968617	77968986	(120326573)	+	L1MC4a	LINE/L1	5566	5953	(1929)	2617517
2696	9.8	1.6	0.0	chr3	77968987	77969355	(120326204)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2617518
2440	27.1	5.2	4.0	chr3	77969356	77969905	(120325654)	+	L1MC4a	LINE/L1	5954	6518	(1477)	2617517
9535	13.2	3.5	4.1	chr3	78389466	78391053	(119904506)	+	THE1C-int	LTR/ERVL-MaLR	1	1578	(2)	2618083
2415	14.7	0.3	0.3	chr3	78391056	78391430	(119904129)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2618083
21	6.4	3.0	0.0	chr3	78391483	78391515	(119904044)	+	(TGT)n	Simple_repeat	1	34	(0)	2618084
2042	12.6	1.6	1.9	chr3	78830382	78830704	(119464855)	C	THE1C	LTR/ERVL-MaLR	(0)	375	54	2618669
246	24.5	8.9	8.9	chr3	81313808	81313833	(116981726)	C	MLT1O	LTR/ERVL-MaLR	(4)	538	522	2621904
2622	11.1	0.5	0.0	chr3	81313834	81314202	(116981357)	C	THE1C	LTR/ERVL-MaLR	(4)	371	1	2621905
246	24.5	8.9	8.9	chr3	81314203	81314287	(116981272)	C	MLT1O	LTR/ERVL-MaLR	(21)	521	427	2621904
2273	13.3	1.9	1.6	chr3	83650642	83651015	(114644544)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2624814
9307	13.3	5.7	0.4	chr3	87195253	87196748	(111098811)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	2629236
1313	11.2	5.9	1.3	chr3	87196751	87196976	(111098583)	+	THE1D	LTR/ERVL-MaLR	3	239	(142)	2629236
260	29.7	2.9	6.5	chr3	87196993	87197100	(111098459)	+	LTR78	LTR/ERV1	56	159	(1145)	2629237
18	11.7	0.0	0.0	chr3	87197153	87197180	(111098379)	+	(AC)n	Simple_repeat	1	28	(0)	2629238
9868	13.8	3.2	3.5	chr3	87589539	87591155	(110704404)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	21	2629726
2591	11.5	0.5	0.3	chr3	87591175	87591548	(110704011)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2629726
7691	17.9	4.7	0.6	chr3	88516845	88519022	(109776537)	C	L1PA8A	LINE/L1	(0)	6468	4196	2630943
1735	16.5	6.2	7.4	chr3	88519024	88519206	(109776353)	C	THE1D	LTR/ERVL-MaLR	(7)	374	183	2630944
2109	12.5	0.4	0.0	chr3	88519207	88519512	(109776047)	C	AluSp	SINE/Alu	(0)	313	2	2630945
2351	12.0	1.9	2.9	chr3	89968173	89968550	(108327009)	C	THE1C	LTR/ERVL-MaLR	(1)	374	1	2632618
222	31.6	1.7	12.3	chr3	95761415	95761498	(102534061)	+	MIR	SINE/MIR	60	132	(130)	2635883
2484	11.6	1.1	1.1	chr3	95761499	95761873	(102533686)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2635884
222	31.6	1.7	12.3	chr3	95761874	95761918	(102533641)	+	MIR	SINE/MIR	133	175	(87)	2635883
1217	13.5	7.3	0.2	chr3	97168290	97168527	(101127032)	+	MSTA	LTR/ERVL-MaLR	1	275	(190)	2637487
51	13.5	0.0	0.0	chr3	97168534	97168614	(101126945)	+	(TC)n	Simple_repeat	1	81	(0)	2637488
857	18.0	11.8	2.0	chr3	97168617	97168814	(101126745)	+	MSTA	LTR/ERVL-MaLR	207	426	(2)	2637487
895	11.3	4.4	0.0	chr3	97168817	97168967	(101126592)	+	MSTA-int	LTR/ERVL-MaLR	1	158	(1473)	2637487
2082	16.0	1.6	1.6	chr3	102658053	102658427	(95637132)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2644838
2118	16.1	0.8	0.5	chr3	103334174	103334547	(94961012)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2645663
2113	14.2	2.1	2.9	chr3	104920150	104920527	(93375032)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2647577
2250	12.8	2.4	1.9	chr3	105970910	105971282	(92324277)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2648940
1937	13.7	14.9	1.1	chr3	106613786	106614153	(91681406)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2649737
15	5.6	0.0	0.0	chr3	107001909	107001927	(91293632)	+	(GA)n	Simple_repeat	1	19	(0)	2650233
2608	10.3	1.6	0.8	chr3	107001988	107002359	(91293200)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2650234
2185	12.8	8.4	1.8	chr3	107067319	107067717	(91227842)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2650320
26164	4.2	0.1	0.0	chr3	112160270	112166385	(86129174)	C	L1PA3	LINE/L1	(0)	6155	34	2657465
415	10.0	16.7	0.0	chr3	112166431	112166510	(86129049)	C	THE1D	LTR/ERVL-MaLR	(82)	299	204	2657466
3026	22.6	3.9	7.0	chr3	112756182	112756258	(85539301)	C	L1ME1	LINE/L1	(262)	5917	5852	2658258
2761	11.5	0.5	0.3	chr3	112756259	112756632	(85538927)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2658260
3026	22.6	3.9	7.0	chr3	112756633	112756702	(85538857)	C	L1ME1	LINE/L1	(328)	5851	5784	2658258
2789	9.1	0.3	0.3	chr3	113426306	113426680	(84868879)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2659161
2143	14.9	1.9	1.6	chr3	117576716	117577089	(80718470)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2665077
42	4.7	0.0	0.0	chr3	117577480	117577524	(80718035)	+	(CA)n	Simple_repeat	1	45	(0)	2665078
191	30.1	2.7	1.4	chr3	117577534	117577607	(80717952)	+	L2c	LINE/L2	3043	3117	(270)	2665079
20	0.0	0.0	0.0	chr3	129752661	129752682	(68542877)	+	(CA)n	Simple_repeat	1	22	(0)	2684335
1942	14.0	13.1	1.9	chr3	129752758	129753136	(68542423)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2684336
2277	11.8	3.2	1.6	chr3	133609480	133609848	(64685711)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2690247
538	17.7	4.0	14.3	chr3	133609849	133610089	(64685470)	C	Charlie4a	DNA/hAT-Charlie	(9)	499	290	2690248
44	2.4	0.0	0.0	chr3	135610446	135610487	(62685072)	+	(GT)n	Simple_repeat	1	42	(0)	2693090
5066	13.4	1.5	0.9	chr3	135610488	135610542	(62685017)	C	L1PB4	LINE/L1	(364)	5792	5734	2693088
2528	12.4	0.8	0.3	chr3	135610543	135610915	(62684644)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2693091
5066	13.4	1.5	0.9	chr3	135610916	135611375	(62684184)	C	L1PB4	LINE/L1	(423)	5733	5273	2693088
229	31.1	11.6	2.9	chr3	136627826	136627997	(61667562)	+	L2b	LINE/L2	2643	2831	(588)	2694733
1872	11.5	11.3	1.5	chr3	136628005	136628347	(61667212)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2694740
183	27.7	0.0	5.8	chr3	136628456	136628524	(61667035)	+	L3b	LINE/CR1	4862	4926	(306)	2694741
190	27.7	11.4	5.6	chr3	136628511	136628617	(61666942)	+	L2b	LINE/L2	3032	3145	(230)	2694733
18	17.6	6.7	0.0	chr3	138834892	138834936	(59460623)	+	(GC)n	Simple_repeat	1	48	(0)	2698265
19	4.0	0.0	0.0	chr3	138835008	138835033	(59460526)	+	(GCG)n	Simple_repeat	1	26	(0)	2698266
2696	9.2	1.3	1.1	chr3	141464399	141464772	(56830787)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2702340
183	29.4	12.5	3.8	chr3	141464827	141464957	(56830602)	C	MIRb	SINE/MIR	(115)	153	10	2702341
290	36.6	3.2	9.0	chr3	141517183	141517269	(56778290)	C	MamSINE1	SINE/tRNA-RTE	(48)	242	162	2702419
1750	13.5	15.0	1.9	chr3	141517270	141517639	(56777920)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	2702420
290	36.6	3.2	9.0	chr3	141517640	141517656	(56777903)	C	MamSINE1	SINE/tRNA-RTE	(129)	161	152	2702419
2504	6.4	0.0	0.7	chr3	141517657	141517954	(56777605)	C	AluY	SINE/Alu	(15)	296	1	2702421
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
2274	12.0	12.0	0.8	chr3	152661312	152661689	(45633870)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	2718494
32	28.5	2.1	4.8	chr3	152661782	152661923	(45633636)	+	(AT)n	Simple_repeat	1	145	(0)	2718495
34	8.6	0.0	0.0	chr3	153163636	153163685	(45131874)	+	(T)n	Simple_repeat	1	50	(0)	2719349
2228	11.7	3.5	0.0	chr3	159850272	159850571	(38444988)	+	AluSx1	SINE/Alu	1	311	(1)	2728843
2492	10.7	7.5	2.2	chr3	159850572	159850934	(38444625)	C	MSTA	LTR/ERVL-MaLR	(38)	390	3	2728842
5221	14.1	0.3	0.8	chr3	161919058	161919686	(36375873)	+	L1PA16	LINE/L1	4521	5146	(1000)	2732002
1968	16.9	8.9	0.8	chr3	161919687	161920079	(36375480)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2732003
5255	13.4	3.5	0.8	chr3	161920080	161921069	(36374490)	+	L1PA16	LINE/L1	5147	6163	(3)	2732002
236	32.2	12.4	1.3	chr3	167578739	167578974	(30716585)	C	L3	LINE/CR1	(569)	3530	3265	2738880
1591	12.8	3.0	1.1	chr3	167578976	167579235	(30716324)	+	THE1D	LTR/ERVL-MaLR	117	381	(0)	2738881
1229	22.1	5.3	3.5	chr3	169029859	169030211	(29265348)	+	Tigger7	DNA/TcMar-Tigger	1	338	(1)	2740850
2651	10.7	0.5	0.3	chr3	169030243	169030616	(29264943)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2740851
2369	11.9	1.1	3.6	chr3	172883755	172884139	(25411420)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2746857
365	29.0	16.7	1.4	chr3	172884172	172884318	(25411241)	C	LTR105_Mam	LTR/ERVL	(371)	229	56	2746856
1890	15.5	2.8	0.0	chr3	172884319	172884698	(25410861)	C	Charlie5	DNA/hAT-Charlie	(0)	2624	2234	2746858
2213	12.5	6.4	0.8	chr3	174044711	174045064	(24250495)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2748408
9975	13.1	2.7	2.0	chr3	174045065	174045167	(24250392)	C	THE1D-int	LTR/ERVL-MaLR	(1476)	104	1	2748407
2048	16.9	0.5	4.1	chr3	174045168	174045556	(24250003)	C	THE1D	LTR/ERVL-MaLR	(0)	375	1	2748407
2520	10.8	1.3	1.1	chr3	175396624	175396997	(22898562)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2750320
1975	13.9	4.3	2.7	chr3	176135314	176135682	(22159877)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2751287
540	27.7	9.7	0.2	chr3	176814176	176814379	(21481180)	C	MIRb	SINE/MIR	(16)	252	20	2752161
10309	12.1	6.3	4.5	chr3	189117904	189119496	(9176063)	+	THE1C-int	LTR/ERVL-MaLR	3	1627	(4)	2773015
2761	10.4	2.4	0.5	chr3	189119501	189119868	(9175691)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2773015
2451	12.0	0.3	6.5	chr3	191777022	191777421	(6518138)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2776989
8379	12.9	6.6	14.2	chr3	191777426	191779195	(6516364)	+	THE1C-int	LTR/ERVL-MaLR	5	1631	(0)	2776989
15	7.2	3.2	3.1	chr3	194003708	194003738	(4291821)	+	(CCTGGG)n	Simple_repeat	1	32	(0)	2780352
1479	17.7	5.5	7.5	chr3	195140397	195140448	(3155111)	+	MLT1A0	LTR/ERVL-MaLR	1	47	(318)	2782419
1854	13.7	10.6	10.8	chr3	195140449	195140874	(3154685)	C	MSTA	LTR/ERVL-MaLR	(3)	425	1	2782420
770	34.4	9.2	3.1	chr3	197134777	197135223	(1160336)	+	LTR16D	LTR/ERVL	175	651	(0)	2786412
1808	12.8	9.4	1.7	chr3	197135233	197135583	(1159976)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2786413
658	24.7	3.7	5.5	chr3	197135589	197135816	(1159743)	+	L1ME3F	LINE/L1	5758	5991	(252)	2786414
34	27.9	4.7	2.2	chr4	674000	674169	(189540386)	+	G-rich	Low_complexity	1	178	(0)	2789392
2341	7.0	0.3	2.6	chr4	844046	844347	(189370208)	+	AluY	SINE/Alu	1	295	(16)	2789596
1784	13.8	12.4	3.2	chr4	844348	844648	(189369907)	C	THE1D	LTR/ERVL-MaLR	(34)	347	3	2789594
1515	23.8	7.8	0.8	chr4	4366373	4366498	(185848057)	+	L1MC	LINE/L1	3229	3365	(2781)	2794602
2240	10.5	2.7	1.9	chr4	4366499	4366868	(185847687)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	2794603
1515	23.8	7.8	0.8	chr4	4366869	4367241	(185847314)	+	L1MC	LINE/L1	3366	3766	(2380)	2794602
2463	9.5	9.3	2.5	chr4	6890313	6890710	(183323845)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2799253
2351	11.4	4.3	2.5	chr4	7378315	7378682	(182835873)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2800075
2684	8.9	1.3	0.3	chr4	7828867	7829237	(182385318)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2800731
4710	13.3	9.3	1.1	chr4	8534317	8534893	(181679662)	+	MER4D	LTR/ERV1	1	657	(246)	2801902
2549	12.7	0.5	1.8	chr4	8534894	8535279	(181679276)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2801903
2210	14.5	0.8	3.6	chr4	11207896	11208281	(179006274)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2805806
287	31.7	12.0	3.6	chr4	13300992	13301060	(176913495)	+	L3	LINE/CR1	3915	3983	(116)	2809133
2633	10.7	0.3	1.3	chr4	13301061	13301439	(176913116)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2809134
13	16.8	2.8	2.8	chr4	15681302	15681347	(174533208)	+	G-rich	Low_complexity	1	46	(0)	2813056
2563	12.1	0.5	0.0	chr4	17206099	17206471	(173008084)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2815739
2442	12.4	1.3	0.5	chr4	18228741	18229112	(171985443)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2817576
2215	12.9	4.5	1.6	chr4	20107415	20107784	(170106771)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2820497
2786	8.0	3.2	0.0	chr4	24947156	24947518	(165267037)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2828022
2027	23.2	6.8	0.0	chr4	33068646	33069085	(157145470)	+	MER70A	LTR/ERVL	1	472	(0)	2840288
1812	14.4	9.6	2.6	chr4	33069155	33069540	(157145015)	C	MSTA	LTR/ERVL-MaLR	(12)	416	1	2840289
458	35.2	3.7	1.7	chr4	33069595	33069834	(157144721)	C	L2a	LINE/L2	(80)	3346	3102	2840290
2254	23.4	0.4	0.0	chr4	42728667	42729124	(147485431)	+	MLT1C	LTR/ERVL-MaLR	1	460	(7)	2856012
2313	11.8	2.9	5.5	chr4	42729125	42729509	(147485046)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2856013
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
2364	19.6	5.0	4.4	chr4	49493900	49494948	(140719607)	+	L1MB8	LINE/L1	4777	5836	(342)	2865154
2241	13.0	7.3	0.5	chr4	49494958	49495361	(140719194)	+	MER61C	LTR/ERV1	11	428	(0)	2865155
2116	11.7	6.4	2.2	chr4	53067439	53067797	(137146758)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2867196
2099	13.5	3.5	1.4	chr4	53279652	53280018	(136934537)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2867479
16	16.1	0.0	0.0	chr4	54234503	54234530	(135980025)	+	(T)n	Simple_repeat	1	28	(0)	2868997
17	13.9	0.0	6.7	chr4	55125629	55125673	(135088882)	+	G-rich	Low_complexity	1	45	(0)	2870381
2589	9.2	1.6	1.1	chr4	55466064	55466436	(134748119)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2870948
2230	8.7	0.3	6.5	chr4	55557824	55558144	(134656411)	+	AluSx1	SINE/Alu	1	301	(11)	2871108
417	28.6	8.2	9.6	chr4	55558155	55558214	(134656341)	+	L1ME3Cz	LINE/L1	4902	4962	(1184)	2871109
2554	10.1	2.7	2.1	chr4	55558215	55558587	(134655968)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2871110
273	13.9	20.0	7.7	chr4	56263887	56263909	(133950646)	+	MER31A	LTR/ERV1	354	374	(111)	2872331
2391	10.9	11.9	0.8	chr4	56263910	56264289	(133950266)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2872332
273	13.9	20.0	7.7	chr4	56264290	56264343	(133950212)	+	MER31A	LTR/ERV1	375	443	(42)	2872331
1910	13.3	8.0	2.0	chr4	60661698	60662049	(129552506)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2878412
3284	20.4	3.9	1.4	chr4	60662085	60662706	(129551849)	C	LTR1E	LTR/ERV1	(0)	804	167	2878413
8827	14.9	5.1	0.8	chr4	64454701	64454749	(125759806)	C	THE1C-int	LTR/ERVL-MaLR	(1532)	48	2	2883179
2179	14.2	1.6	0.3	chr4	64454754	64455119	(125759436)	C	THE1C	LTR/ERVL-MaLR	(4)	371	1	2883181
2328	34.1	8.4	6.7	chr4	64455120	64455907	(125758648)	+	L2a	LINE/L2	1736	2529	(890)	2883177
1957	14.8	5.6	0.8	chr4	65286903	65287256	(124927299)	C	THE1C	LTR/ERVL-MaLR	(3)	372	1	2884201
13	18.2	0.0	4.9	chr4	65670313	65670353	(124544202)	+	(GCTGAGG)n	Simple_repeat	1	41	(0)	2884662
2302	13.5	1.1	1.3	chr4	67211860	67212235	(123002320)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2886610
1865	15.4	13.8	1.3	chr4	70932960	70933333	(119281222)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2891513
13095	14.5	5.5	3.0	chr4	71039215	71040031	(119174524)	C	L1MC1	LINE/L1	(1486)	4835	3997	2891688
2212	13.9	1.3	5.2	chr4	71040032	71040377	(119174178)	+	THE1C	LTR/ERVL-MaLR	1	340	(35)	2891690
2078	12.1	0.7	0.4	chr4	71040378	71040684	(119173871)	C	AluSq2	SINE/Alu	(0)	313	1	2891691
976	15.7	5.3	0.6	chr4	74121706	74121885	(116092670)	+	MER1A	DNA/hAT-Charlie	341	529	(0)	2895741
1278	13.0	0.0	0.5	chr4	74121886	74122071	(116092484)	+	MLT1B	LTR/ERVL-MaLR	206	390	(0)	2895738
1894	13.8	13.0	0.8	chr4	74122193	74122549	(116092006)	C	MSTA	LTR/ERVL-MaLR	(21)	407	1	2895742
1020	21.7	2.6	8.1	chr4	74122561	74123001	(116091554)	+	L1MC4	LINE/L1	7419	7869	(13)	2895743
2662	23.7	8.3	10.2	chr4	77795319	77795395	(112419160)	+	L1M5	LINE/L1	4362	4446	(1700)	2901177
1830	14.7	12.4	4.8	chr4	77795396	77795789	(112418766)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2901179
2662	23.7	8.3	10.2	chr4	77795790	77796004	(112418551)	+	L1M5	LINE/L1	4447	4623	(1523)	2901177
504	33.1	8.8	6.6	chr4	79877816	79878110	(110336445)	+	L2a	LINE/L2	2960	3267	(159)	2904125
2074	12.4	6.8	1.9	chr4	79878111	79878472	(110336083)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2904126
2483	11.7	1.9	0.0	chr4	80905533	80905900	(109308655)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2905392
2453	13.4	0.5	0.0	chr4	80907444	80907816	(109306739)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2905392
2557	13.4	0.5	1.8	chr4	83621951	83622330	(106592225)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2909897
10378	11.4	4.1	1.0	chr4	83622331	83623860	(106590695)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2909897
2366	10.8	5.2	0.8	chr4	84927516	84927879	(105286676)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2911853
3534	15.0	8.0	2.3	chr4	84927880	84928513	(105286042)	+	MLT2B5	LTR/ERVL	44	717	(0)	2911852
680	34.6	12.6	3.4	chr4	87058586	87059651	(103154904)	+	L2	LINE/L2	1708	2885	(534)	2914851
2185	12.0	5.0	2.6	chr4	87285271	87285622	(102928933)	+	THE1B	LTR/ERVL-MaLR	4	364	(0)	2915240
271	4.9	0.0	0.0	chr4	87285624	87285664	(102928891)	+	L1MB4	LINE/L1	6139	6179	(1)	2915247
412	20.6	1.8	0.0	chr4	87285662	87285768	(102928787)	+	L1MC5	LINE/L1	9139	9247	(57)	2915248
984	10.5	0.6	9.0	chr4	87285780	87285967	(102928588)	+	MSTA	LTR/ERVL-MaLR	206	377	(4)	2915249
2248	10.3	0.7	0.0	chr4	88164073	88164364	(102050191)	C	AluSx1	SINE/Alu	(18)	294	1	2916644
2789	8.1	1.3	1.3	chr4	88164365	88164701	(102049854)	+	THE1C	LTR/ERVL-MaLR	36	375	(0)	2916643
2158	14.5	0.0	0.3	chr4	88164768	88165078	(102049477)	C	AluSz	SINE/Alu	(2)	310	1	2916645
425	25.5	9.7	5.6	chr4	101364254	101364412	(88850143)	C	L1ME3A	LINE/L1	(1526)	4620	4443	2934275
2654	10.4	0.3	0.3	chr4	101364413	101364787	(88849768)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2934279
425	25.5	9.7	5.6	chr4	101364788	101364843	(88849712)	C	L1ME3A	LINE/L1	(1704)	4442	4395	2934275
2682	10.2	0.0	0.3	chr4	104431355	104431726	(85782829)	C	THE1C	LTR/ERVL-MaLR	(0)	375	5	2938194
2289	11.0	1.3	0.3	chr4	113889443	113889750	(76324805)	+	AluSq2	SINE/Alu	1	311	(2)	2951416
2657	10.2	0.5	0.8	chr4	113889766	113890139	(76324416)	C	THE1C	LTR/ERVL-MaLR	(0)	375	3	2951417
523	30.8	16.3	3.5	chr4	113909139	113909412	(76305143)	+	L3	LINE/CR1	3735	4061	(38)	2951441
2303	13.1	2.1	1.3	chr4	113909413	113909784	(76304771)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2951449
1272	30.0	9.7	2.9	chr4	113962514	113963255	(76251300)	+	L2a	LINE/L2	2550	3360	(66)	2951502
2567	10.0	0.5	1.1	chr4	113963256	113963629	(76250926)	C	THE1C	LTR/ERVL-MaLR	(0)	375	4	2951503
984	29.9	13.3	3.9	chr4	113963630	113963691	(76250864)	+	L2a	LINE/L2	3361	3426	(0)	2951502
1545	23.8	6.9	4.1	chr4	115138878	115139367	(75075188)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	2952895
556	25.6	4.0	6.7	chr4	115139368	115139519	(75075036)	C	L2	LINE/L2	(2475)	944	795	2952894
2474	10.9	1.6	1.6	chr4	115139520	115139892	(75074663)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	2952896
556	25.6	4.0	6.7	chr4	115139893	115139938	(75074617)	C	L2	LINE/L2	(2625)	794	750	2952894
21	23.0	2.4	4.7	chr4	119627302	119627391	(70587164)	+	(CCGCG)n	Simple_repeat	1	87	(0)	2958740
2595	10.7	0.5	0.5	chr4	120710532	120710906	(69503649)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2960133
780	28.6	2.8	3.2	chr4	120710907	120711074	(69503481)	+	MER119	DNA/hAT-Charlie	58	231	(352)	2960132
453	24.4	6.5	0.9	chr4	120711064	120711179	(69503376)	+	MER119	DNA/hAT-Charlie	461	583	(0)	2960134
612	35.7	1.9	1.3	chr4	122683608	122683919	(67530636)	C	L1M2	LINE/L1	(6407)	442	129	2962834
1419	15.3	14.5	1.6	chr4	122683921	122684225	(67530330)	+	MSTA	LTR/ERVL-MaLR	78	428	(0)	2962835
393	26.0	0.9	0.0	chr4	122684227	122684330	(67530225)	+	MIR	SINE/MIR	70	174	(88)	2962836
16	18.9	0.0	2.5	chr4	123373469	123373508	(66841047)	+	A-rich	Low_complexity	1	40	(0)	2963868
2375	12.5	11.9	0.8	chr4	123373520	123373898	(66840657)	+	MSTA	LTR/ERVL-MaLR	1	427	(1)	2963869
26272	5.0	0.3	0.2	chr4	124611938	124618085	(65596470)	C	L1PA4	LINE/L1	(1)	6327	175	2965513
2536	11.8	0.3	2.1	chr4	124618125	124618504	(65596051)	+	THE1C	LTR/ERVL-MaLR	3	375	(0)	2965514
8988	13.2	7.5	0.3	chr4	125422708	125424169	(64790386)	+	THE1C-int	LTR/ERVL-MaLR	5	1580	(0)	2966592
2220	13.7	0.5	2.9	chr4	125424170	125424553	(64790002)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2966592
400	27.2	16.0	0.6	chr4	125424618	125424776	(64789779)	C	L2a	LINE/L2	(9)	3417	3230	2966593
2596	11.0	0.5	0.0	chr4	125509478	125509850	(64704705)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2966691
8849	13.6	9.5	0.5	chr4	126299909	126301389	(63913166)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	2967663
2085	17.2	0.8	1.3	chr4	126301392	126301768	(63912787)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2967663
274	37.4	3.4	0.9	chr4	126301769	126301884	(63912671)	C	Tigger12	DNA/TcMar-Tigger	(2289)	186	68	2967664
4463	21.5	3.5	8.7	chr4	127508564	127510327	(62704228)	+	L1MDa	LINE/L1	783	2446	(4187)	2969145
299	28.6	4.5	4.5	chr4	127622561	127622692	(62591863)	+	L2a	LINE/L2	3295	3426	(0)	2969317
2417	9.6	4.2	5.7	chr4	128376189	128376575	(61837980)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2970662
183	33.3	1.7	0.0	chr4	133212530	133212586	(57001969)	+	MIR	SINE/MIR	25	82	(180)	2976709
2348	12.1	2.9	0.6	chr4	133212637	133213001	(57001554)	C	THE1C	LTR/ERVL-MaLR	(0)	375	2	2976710
32	22.3	0.0	1.2	chr4	139084411	139084490	(51130065)	+	(CGGCGG)n	Simple_repeat	1	80	(0)	2983898
1946	15.1	11.7	4.3	chr4	139284516	139284867	(50929688)	+	MSTA	LTR/ERVL-MaLR	1	398	(30)	2984359
2184	11.9	1.0	0.0	chr4	139284868	139285161	(50929394)	C	AluSp	SINE/Alu	(16)	297	1	2984360
1893	14.3	5.9	2.2	chr4	143648426	143648783	(46565772)	+	THE1C	LTR/ERVL-MaLR	1	372	(3)	2990578
1562	19.7	1.4	1.8	chr4	143648785	143649063	(46565492)	C	AluJr	SINE/Alu	(34)	278	1	2990579
2194	13.9	9.1	0.8	chr4	144859557	144859948	(45354607)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2992120
266	28.9	8.5	1.0	chr4	148382260	148382357	(41832198)	C	L2b	LINE/L2	(0)	3375	3270	2997048
2519	13.6	0.3	0.0	chr4	154557305	154557678	(35656877)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3006207
18	0.0	0.0	0.0	chr4	156763364	156763383	(33451172)	+	(A)n	Simple_repeat	1	20	(0)	3009223
289	22.1	2.3	1.1	chr4	156763384	156763470	(33451085)	C	Charlie18a	DNA/hAT-Charlie	(134)	208	121	3009224
9910	12.2	2.6	4.5	chr4	156839552	156841162	(33373393)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3009317
2459	11.8	0.5	2.4	chr4	156841163	156841502	(33373053)	+	THE1C	LTR/ERVL-MaLR	1	341	(34)	3009317
2004	15.8	1.0	0.7	chr4	156841503	156841805	(33372750)	C	AluSx	SINE/Alu	(8)	304	1	3009319
1408	23.3	7.7	3.8	chr4	156988588	156988668	(33225887)	+	MLT1C	LTR/ERVL-MaLR	1	82	(385)	3009523
2159	14.1	1.3	3.1	chr4	156988669	156989050	(33225505)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3009524
2176	13.5	0.0	1.9	chr4	158921157	158921474	(31293081)	+	AluSx	SINE/Alu	1	312	(0)	3012096
1306	13.2	9.3	8.1	chr4	158921475	158921711	(31292844)	+	MSTA	LTR/ERVL-MaLR	186	428	(0)	3012094
395	26.3	0.0	1.0	chr4	158921712	158921807	(31292748)	C	L1MC4	LINE/L1	(1220)	6822	6728	3012093
2053	13.9	5.0	2.0	chr4	159661263	159661614	(30552941)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	3013218
2179	13.4	2.4	4.7	chr4	159661615	159661971	(30552584)	+	THE1C	LTR/ERVL-MaLR	27	375	(0)	3013217
3230	19.6	3.3	1.2	chr4	159661972	159662716	(30551839)	C	L1MDa	LINE/L1	(4117)	2516	1756	3013213
2029	17.8	0.3	3.2	chr4	166184196	166184330	(24030225)	+	MLT1A0	LTR/ERVL-MaLR	5	132	(233)	3022066
2361	12.1	2.7	0.8	chr4	166184331	166184698	(24029857)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3022067
2029	17.8	0.3	3.2	chr4	166184699	166184933	(24029622)	+	MLT1A0	LTR/ERVL-MaLR	133	364	(1)	3022066
2777	9.6	0.3	0.5	chr4	168578257	168578632	(21635923)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3025020
1298	30.7	7.2	6.5	chr4	170322644	170323646	(19890909)	+	L2a	LINE/L2	2403	3425	(1)	3027606
2218	12.7	3.2	0.8	chr4	170323658	170324023	(19890532)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3027607
19	8.5	0.0	8.9	chr4	182449092	182449136	(7765419)	+	(GCG)n	Simple_repeat	1	45	(0)	3043420
28	10.0	0.0	0.0	chr4	182449187	182449230	(7765325)	+	(GCG)n	Simple_repeat	1	44	(0)	3043420
2333	10.7	4.2	1.4	chr4	184380248	184380617	(5833938)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3046467
13	0.0	0.0	0.0	chr4	184473571	184473587	(5740968)	+	(GCG)n	Simple_repeat	1	17	(0)	3046623
26	15.6	0.0	0.0	chr4	184473891	184473934	(5740621)	+	(CA)n	Simple_repeat	1	44	(0)	3046624
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
4747	18.1	7.3	9.6	chr4	190119764	190122447	(92108)	+	TAR1	Satellite/telo	1	2622	(566)	3054643
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
300	23.6	10.3	5.1	chr5	5314728	5314883	(176223376)	C	MER5A1	DNA/hAT-Charlie	(1)	165	1	3060414
296	27.0	1.1	6.3	chr5	5314914	5314979	(176223280)	+	L2a	LINE/L2	3337	3399	(27)	3060415
2597	10.8	0.8	3.4	chr5	5314980	5315364	(176222895)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3060416
2660	11.3	1.3	0.0	chr5	9934177	9934546	(171603713)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3066135
15298	7.7	1.2	0.4	chr5	9934597	9937480	(171600779)	C	L1PA7	LINE/L1	(1)	6153	3253	3066136
2373	12.5	1.9	1.6	chr5	14135590	14135962	(167402297)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	3071845
2757	11.0	0.3	1.3	chr5	15066839	15067217	(166471042)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3073110
834	14.5	0.7	2.9	chr5	16946575	16946712	(164591547)	+	AluJo	SINE/Alu	2	136	(176)	3075836
2232	14.2	11.0	0.8	chr5	16946719	16947101	(164591158)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	3075837
2268	14.0	8.2	2.0	chr5	17162382	17162782	(164375477)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3076356
1937	19.1	3.1	4.5	chr5	17162783	17162879	(164375380)	C	MLT1B	LTR/ERVL-MaLR	(297)	93	1	3076354
2180	12.8	3.7	5.4	chr5	17671343	17671729	(163866530)	+	THE1D	LTR/ERVL-MaLR	1	380	(1)	3077069
279	25.8	7.5	9.5	chr5	17671730	17671758	(163866501)	C	MLT1E1	LTR/ERVL-MaLR	(627)	27	1	3077068
2163	13.9	2.5	0.3	chr5	18145891	18146243	(163392016)	C	THE1C	LTR/ERVL-MaLR	(0)	375	15	3077706
2092	16.3	1.1	1.3	chr5	19842246	19842619	(161695640)	+	THE1C	LTR/ERVL-MaLR	3	375	(0)	3079860
8782	13.6	7.6	5.1	chr5	19842628	19844206	(161694053)	+	THE1C-int	LTR/ERVL-MaLR	10	1631	(0)	3079860
1361	14.3	19.4	3.1	chr5	20197829	20198145	(161340114)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3080361
9762	13.7	3.2	0.3	chr5	20198146	20199680	(161338579)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	3080361
1747	16.1	5.2	5.5	chr5	26463407	26463788	(155074471)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3088587
2746	9.9	0.3	0.8	chr5	31660374	31660750	(149877509)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3095308
1622	16.9	0.4	4.3	chr5	31660755	31661033	(149877226)	C	AluJr	SINE/Alu	(44)	268	1	3095309
1488	16.4	2.9	6.5	chr5	31839566	31839678	(149698581)	+	AluJb	SINE/Alu	1	111	(201)	3095679
2491	11.4	1.6	1.1	chr5	31839679	31840049	(149698210)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	3095680
2381	21.5	4.5	2.2	chr5	33987412	33987959	(147550300)	+	MER119	DNA/hAT-Charlie	7	567	(16)	3099182
287	27.0	8.2	0.0	chr5	33987961	33988049	(147550210)	+	MIRc	SINE/MIR	112	208	(60)	3099183
268	35.3	7.8	3.2	chr5	33988059	33988304	(147549955)	+	MLT1L	LTR/ERVL-MaLR	8	265	(345)	3099184
1778	16.4	7.2	5.2	chr5	34013496	34013766	(147524493)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	96	3099229
2311	11.9	3.5	2.7	chr5	34013767	34014138	(147524121)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3099230
1778	16.4	7.2	5.2	chr5	34014139	34014232	(147524027)	C	MLT1A	LTR/ERVL-MaLR	(279)	95	2	3099229
12125	18.3	7.2	2.5	chr5	37135093	37135327	(144402932)	C	L1PREC2	LINE/L1	(3149)	2997	2776	3103869
2140	12.3	4.3	5.3	chr5	37135328	37135552	(144402707)	C	THE1C	LTR/ERVL-MaLR	(0)	375	161	3103873
2341	9.7	0.7	0.0	chr5	37135553	37135851	(144402408)	+	AluSc5	SINE/Alu	1	301	(8)	3103874
10485	10.4	4.2	0.5	chr5	37136005	37137524	(144400735)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3103873
2479	11.8	0.8	1.6	chr5	37137525	37137902	(144400357)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3103873
2811	8.9	0.3	0.8	chr5	38644469	38644843	(142893416)	+	THE1C	LTR/ERVL-MaLR	3	375	(0)	3106434
1816	13.7	2.1	18.5	chr5	39012017	39012464	(142525795)	+	THE1C	LTR/ERVL-MaLR	3	375	(0)	3106951
234	18.4	0.0	10.9	chr5	56419025	56419047	(125119212)	+	MIRc	SINE/MIR	85	107	(161)	3124994
2052	14.8	10.1	1.5	chr5	56419048	56419438	(125118821)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3124995
234	18.4	0.0	10.9	chr5	56419439	56419469	(125118790)	+	MIRc	SINE/MIR	108	133	(135)	3124994
2138	16.9	0.5	1.3	chr5	59523689	59524066	(122014193)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3129621
9483	12.0	5.0	4.3	chr5	59524067	59525634	(122012625)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3129621
352	30.0	10.8	3.1	chr5	59628585	59628799	(121909460)	C	L2a	LINE/L2	(24)	3402	3165	3129748
2740	9.7	0.8	0.0	chr5	59628800	59629171	(121909088)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3129749
352	30.0	10.8	3.1	chr5	59629172	59629210	(121909049)	C	L2a	LINE/L2	(262)	3164	3126	3129748
2004	18.9	1.3	5.1	chr5	59629214	59629699	(121908560)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	3129750
2077	13.6	10.8	3.8	chr5	60717458	60717854	(120820405)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3131230
745	18.5	9.0	0.0	chr5	60718019	60718180	(120820079)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	3131231
2110	14.1	0.3	3.5	chr5	62220532	62220719	(119317540)	+	L1M3	LINE/L1	5442	5623	(548)	3133381
2537	10.7	8.7	1.8	chr5	62220720	62221117	(119317142)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3133382
12	18.0	8.8	4.0	chr5	62306381	62306448	(119231811)	+	(CTCCGCC)n	Simple_repeat	1	74	(0)	3133536
2275	12.9	0.9	12.5	chr5	73287033	73287386	(108250873)	+	L1MB2	LINE/L1	5746	6098	(73)	3150274
2624	10.2	0.8	1.6	chr5	73287387	73287764	(108250495)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3150275
2019	24.8	3.5	0.0	chr5	87553205	87553652	(93984607)	C	ERVL-E-int	LTR/ERVL	(949)	4718	4255	3171258
2287	11.2	1.9	2.6	chr5	87553654	87554019	(93984240)	C	THE1C	LTR/ERVL-MaLR	(10)	422	1	3171259
9859	12.7	4.9	1.0	chr5	87554020	87555536	(93982723)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3171259
4083	17.6	4.6	3.9	chr5	88532945	88533760	(93004499)	+	L1MB2	LINE/L1	4899	5696	(475)	3172485
2390	12.4	3.2	0.6	chr5	88533761	88534125	(93004134)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3172486
4083	17.0	7.0	3.5	chr5	88534126	88534563	(93003696)	+	L1MB2	LINE/L1	5697	6171	(0)	3172485
1216	18.9	1.3	5.0	chr5	91229044	91229283	(90308976)	+	MER44D	DNA/TcMar-Tigger	1	231	(474)	3175839
573	9.8	2.9	8.1	chr5	91229288	91229311	(90308948)	+	Tigger7	DNA/TcMar-Tigger	2386	2408	(83)	3175840
2266	11.7	4.5	0.8	chr5	91229312	91229672	(90308587)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3175841
10335	11.2	3.5	0.7	chr5	91229673	91231206	(90307053)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3175841
2299	12.5	1.9	1.6	chr5	93396495	93396868	(88141391)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3178637
763	23.9	7.1	4.2	chr5	93396912	93397199	(88141060)	C	MER46C	DNA/TcMar-Tigger	(12)	326	30	3178638
2160	13.8	0.0	0.6	chr5	95316210	95316520	(86221739)	C	AluSx3	SINE/Alu	(2)	309	1	3180983
2267	11.8	2.4	7.1	chr5	95316521	95316850	(86221409)	C	THE1C	LTR/ERVL-MaLR	(47)	328	1	3180982
1208	23.7	3.7	5.8	chr5	97581644	97582053	(83956206)	C	MER39	LTR/ERV1	(19)	688	91	3184140
228	25.2	18.6	3.7	chr5	97582038	97582173	(83956086)	C	MER39	LTR/ERV1	(406)	165	5	3184140
2284	14.0	0.5	1.6	chr5	100107587	100107964	(81430295)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	3187320
328	27.6	6.5	2.5	chr5	101155337	101155615	(80382644)	C	L1ME2	LINE/L1	(2964)	3182	2892	3188601
2337	12.8	1.9	3.2	chr5	101155630	101156008	(80382251)	C	THE1D	LTR/ERVL-MaLR	(7)	374	1	3188608
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
2592	10.8	0.8	0.3	chr5	111638852	111639224	(69899035)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3201697
9919	11.0	3.3	1.0	chr5	111639225	111640763	(69897496)	+	THE1C-int	LTR/ERVL-MaLR	1	1575	(5)	3201697
12	13.9	0.0	0.0	chr5	115180302	115180325	(66357934)	+	(GGC)n	Simple_repeat	1	24	(0)	3206402
15	4.7	0.0	0.0	chr5	115180625	115180646	(66357613)	+	(AAAT)n	Simple_repeat	1	22	(0)	3206403
34	20.3	0.0	0.0	chr5	115180831	115180895	(66357364)	+	A-rich	Low_complexity	1	65	(0)	3206404
1984	14.8	5.8	5.8	chr5	116743813	116744193	(64794066)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3208545
263	34.7	2.8	3.3	chr5	116744194	116744213	(64794046)	C	L2a	LINE/L2	(488)	2938	2919	3208544
2102	13.9	12.4	1.1	chr5	118080035	118080413	(63457846)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3210426
549	29.8	5.1	3.3	chr5	118080424	118080734	(63457525)	C	HAL1ME	LINE/L1	(639)	1826	1497	3210427
2201	13.9	11.0	1.6	chr5	123469874	123470260	(58067999)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3217415
500	29.3	10.1	10.6	chr5	123470261	123470277	(58067982)	C	L2a	LINE/L2	(325)	3062	3046	3217414
8987	21.2	3.8	1.2	chr5	123823253	123824618	(57713641)	+	L1MA4A	LINE/L1	1629	3025	(4541)	3217888
2425	13.0	1.3	0.5	chr5	123824619	123824990	(57713269)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3217889
9890	12.9	4.4	0.5	chr5	123824991	123826508	(57711751)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3217889
2779	10.5	0.8	0.8	chr5	124987770	124988144	(56550115)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3219466
2291	12.0	2.1	1.1	chr5	125405991	125406361	(56131898)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3220028
10728	19.6	3.2	3.4	chr5	128582313	128582472	(52955787)	+	L1MC3	LINE/L1	6873	7027	(758)	3224308
2347	12.7	1.1	1.3	chr5	128582473	128582848	(52955411)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3224310
1764	14.9	5.1	8.2	chr5	129397337	129397724	(52140535)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3225273
10974	11.8	2.7	0.4	chr5	135658021	135659609	(45878650)	C	MSTA-int	LTR/ERVL-MaLR	(4)	1627	1	3234612
2197	13.5	11.4	1.6	chr5	135659611	135659995	(45878264)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3234612
19	24.5	1.3	5.0	chr5	138033058	138033158	(43505101)	+	(GGCGG)n	Simple_repeat	1	97	(0)	3237963
245	25.0	11.4	6.1	chr5	142711071	142711200	(38827059)	C	LTR103b_Mam	LTR/ERV1?	(102)	446	309	3246531
2345	8.7	8.0	2.5	chr5	142711201	142711434	(38826825)	C	THE1C	LTR/ERVL-MaLR	(0)	375	116	3246532
3398	9.4	5.4	19.5	chr5	142711435	142712148	(38826111)	+	LTR66	LTR/ERVL	1	608	(2)	3246533
9816	11.8	3.4	1.0	chr5	147697444	147698468	(33839791)	+	THE1C-int	LTR/ERVL-MaLR	555	1580	(0)	3254707
2533	12.7	1.1	0.0	chr5	147698469	147698839	(33839420)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3254707
2501	11.6	0.8	1.6	chr5	147776187	147776564	(33761695)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3254822
2072	15.0	0.0	0.0	chr5	147776646	147776932	(33761327)	+	AluSz6	SINE/Alu	1	287	(25)	3254823
1972	15.8	11.0	0.8	chr5	148378665	148379046	(33159213)	C	MSTA	LTR/ERVL-MaLR	(0)	428	3	3255789
1620	19.7	3.8	12.0	chr5	148379047	148379092	(33159167)	C	MSTD	LTR/ERVL-MaLR	(357)	39	1	3255788
17	25.0	4.3	5.1	chr5	149358053	149358146	(32180113)	+	(CCG)n	Simple_repeat	1	98	(0)	3257561
256	26.5	3.8	4.7	chr5	149358613	149358719	(32179540)	C	L2b	LINE/L2	(188)	3187	3082	3257562
2080	11.4	7.6	1.9	chr5	151438956	151439314	(30098945)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3261874
18	17.9	0.0	0.0	chr5	151447684	151447722	(30090537)	+	(AGCCGG)n	Simple_repeat	1	39	(0)	3261885
354	32.8	1.6	7.6	chr5	151448140	151448337	(30089922)	C	MIR3	SINE/MIR	(20)	188	3	3261886
2304	13.1	2.1	0.8	chr5	158385555	158385924	(23152335)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3274510
1079	16.2	0.0	1.8	chr5	158920576	158920742	(22617517)	C	FRAM	SINE/Alu	(12)	164	1	3275316
306	36.8	8.2	2.2	chr5	164269708	164269935	(17268324)	C	MIRb	SINE/MIR	(0)	268	26	3283768
2063	12.4	7.5	10.2	chr5	164269974	164270414	(17267845)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3283769
406	31.1	4.6	3.6	chr5	164588178	164588467	(16949792)	C	L1M5	LINE/L1	(2058)	4088	3794	3284189
1929	16.9	2.1	2.4	chr5	164588557	164588932	(16949327)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3284190
4442	16.7	5.5	0.9	chr5	165891145	165891947	(15646312)	+	MER21B	LTR/ERVL	3	844	(24)	3285945
217	29.0	3.9	6.1	chr5	167882238	167882369	(13655890)	C	MER5A	DNA/hAT-Charlie	(43)	146	18	3289007
336	32.5	4.7	4.7	chr5	167882371	167882469	(13655790)	+	MIR3	SINE/MIR	11	113	(155)	3289008
2488	13.1	1.6	0.3	chr5	167882470	167882845	(13655414)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3289009
12	11.2	4.4	6.4	chr5	170400143	170400178	(11138081)	+	(TTCCTA)n	Simple_repeat	1	35	(0)	3293529
2199	13.7	4.2	1.1	chr5	170400179	170400547	(11137712)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3293530
2665	2.7	0.0	0.0	chr5	172958945	172959238	(8579021)	+	AluY	SINE/Alu	5	298	(13)	3298606
2100	11.6	0.3	1.3	chr5	175625846	175626147	(5912112)	C	AluSc8	SINE/Alu	(0)	311	13	3303792
2182	10.2	5.6	13.7	chr5	175626148	175626491	(5911768)	C	THE1C	LTR/ERVL-MaLR	(38)	337	1	3303791
14	13.1	0.0	0.0	chr5	175626551	175626576	(5911683)	+	(TTTA)n	Simple_repeat	1	26	(0)	3303793
430	13.2	1.4	0.0	chr5	176540252	176540319	(4997940)	C	MIR3	SINE/MIR	(62)	146	78	3305488
274	35.7	4.5	2.3	chr5	176540376	176540547	(4997712)	+	L2c	LINE/L2	3020	3195	(192)	3305489
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
2626	10.5	1.3	1.1	chr5	179399130	179399503	(2138756)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3310769
2404	13.0	1.6	1.1	chr5	179401113	179401485	(2136774)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3310769
651	27.5	9.2	4.2	chr5	179401491	179401873	(2136386)	+	MLT1J1	LTR/ERVL-MaLR	21	424	(20)	3310770
2215	16.0	1.3	0.8	chr5	180265315	180265693	(1272566)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3312319
358	27.0	6.8	3.2	chr5	180265765	180265921	(1272338)	+	L1PB	LINE/L1	4885	5047	(1099)	3312320
2223	13.2	5.3	0.8	chr6	1442139	1442496	(169363483)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3316115
1467	14.6	7.6	2.4	chr6	1442497	1442714	(169363265)	+	LOR1b	LTR/ERV1	233	461	(0)	3316114
196	25.6	0.0	0.0	chr6	4018919	4018961	(166787018)	+	L2b	LINE/L2	3332	3374	(1)	3319820
1942	13.7	0.0	2.3	chr6	7309173	7309471	(163496508)	+	AluJo	SINE/Alu	1	292	(20)	3324934
2636	9.5	1.6	1.1	chr6	7309501	7309873	(163496106)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3324935
15	23.5	0.0	0.0	chr6	7309929	7309968	(163496011)	+	(TTCATC)n	Simple_repeat	1	40	(0)	3324936
10814	12.6	1.2	1.6	chr6	8345545	8347179	(162458800)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3326591
2063	11.5	6.9	2.8	chr6	8347180	8347538	(162458441)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3326591
533	34.4	6.1	0.5	chr6	8347669	8347855	(162458124)	+	MIRb	SINE/MIR	40	237	(31)	3326592
18172	14.1	3.2	2.7	chr6	8459957	8461158	(162344821)	C	L1PA16	LINE/L1	(3112)	3502	2236	3326761
2140	15.4	0.0	0.0	chr6	8461159	8461463	(162344516)	C	AluSx	SINE/Alu	(7)	305	1	3326764
1863	20.7	4.3	2.9	chr6	16100303	16100638	(154705341)	C	MLT1C	LTR/ERVL-MaLR	(8)	459	125	3338999
2731	10.9	0.0	0.3	chr6	16100639	16101014	(154704965)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3339000
2810	8.6	0.5	1.6	chr6	18075285	18075663	(152730316)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3342385
2222	11.8	2.4	4.7	chr6	19473484	19473867	(151332112)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3344479
2552	15.7	7.7	1.5	chr6	21077344	21077421	(149728558)	+	MLT1D	LTR/ERVL-MaLR	1	79	(426)	3347080
2002	13.6	12.4	2.6	chr6	21077422	21077806	(149728173)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3347081
1178	31.3	13.7	1.4	chr6	24315487	24316492	(146489487)	C	L2a	LINE/L2	(2)	3424	2037	3351693
1513	17.8	1.3	3.6	chr6	26384134	26384442	(144421537)	C	AluJr	SINE/Alu	(5)	307	6	3355155
2284	13.8	1.3	2.4	chr6	26417241	26417619	(144388360)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3355210
10326	13.6	1.6	2.7	chr6	26417620	26419264	(144386715)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	5	3355210
896	26.6	2.9	13.6	chr6	28340129	28340290	(142465689)	C	L1MEc	LINE/L1	(4279)	2121	2017	3358475
2490	11.3	3.2	1.4	chr6	28340291	28340658	(142465321)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3358476
896	26.3	3.1	15.0	chr6	28340659	28341051	(142464928)	C	L1MEc	LINE/L1	(4384)	2016	1647	3358475
659	1.4	0.0	0.0	chr6	28648207	28648280	(142157699)	C	tRNA-Thr-ACG_	tRNA	(3)	74	1	3358969
2287	8.8	0.3	0.0	chr6	28757384	28757677	(142048302)	C	AluSp	SINE/Alu	(16)	297	3	3359168
2048	24.5	4.6	2.4	chr6	29788554	29788652	(141017327)	+	MLT1F1	LTR/ERVL-MaLR	6	104	(465)	3360652
2169	15.6	0.5	2.4	chr6	29788653	29789034	(141016945)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3360653
2048	24.5	4.6	2.4	chr6	29789035	29789485	(141016494)	+	MLT1F1	LTR/ERVL-MaLR	105	569	(0)	3360652
16	0.0	0.0	0.0	chr6	32838466	32838483	(137967496)	+	(A)n	Simple_repeat	1	18	(0)	3365481
2265	10.9	3.8	0.8	chr6	33866187	33866545	(136939434)	C	THE1C	LTR/ERVL-MaLR	(0)	375	6	3367250
2554	8.9	3.5	0.0	chr6	38050381	38050741	(132755238)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	3375843
745	20.1	0.0	5.0	chr6	38050742	38050775	(132755204)	C	FLAM_A	SINE/Alu	(109)	33	1	3375842
1371	16.8	0.3	10.8	chr6	38333089	38333421	(132472558)	+	MER45B	DNA/hAT-Tip100	407	704	(336)	3376210
2024	14.3	11.9	1.8	chr6	38333425	38333808	(132472171)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3376211
2779	13.7	0.9	0.2	chr6	38333817	38334278	(132471701)	+	MSTA-int	LTR/ERVL-MaLR	9	473	(1158)	3376211
330	30.8	5.1	8.8	chr6	46065939	46066201	(124739778)	+	L1ME4b	LINE/L1	629	881	(11)	3389655
15	0.0	0.0	0.0	chr6	47478192	47478210	(123327769)	+	(GGA)n	Simple_repeat	1	19	(0)	3391825
2265	9.3	1.4	0.0	chr6	50325966	50326254	(120479725)	+	AluSc5	SINE/Alu	4	296	(13)	3395551
2328	11.7	2.1	5.9	chr6	50326255	50326596	(120479383)	C	THE1C	LTR/ERVL-MaLR	(31)	344	1	3395549
2733	7.4	1.1	1.1	chr6	57322357	57322726	(113483253)	+	THE1C	LTR/ERVL-MaLR	3	372	(3)	3405458
2634	10.5	0.8	1.1	chr6	63186200	63186575	(107619404)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3410117
2108	12.6	1.0	2.8	chr6	63944647	63944963	(106861016)	+	AluSz6	SINE/Alu	1	311	(1)	3411286
2293	11.1	4.0	1.4	chr6	63945090	63945454	(106860525)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3411287
9073	13.6	1.6	7.3	chr6	64419374	64421050	(106384929)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3411873
2290	12.5	2.1	1.9	chr6	64421051	64421424	(106384555)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3411873
2251	13.8	0.5	4.4	chr6	66064503	66064889	(104741090)	+	THE1C	LTR/ERVL-MaLR	4	375	(0)	3413856
17	20.2	2.1	2.1	chr6	72622248	72622294	(98183685)	+	(GCG)n	Simple_repeat	1	48	(0)	3422094
39	4.7	0.0	0.0	chr6	73263040	73263084	(97542895)	+	(GGC)n	Simple_repeat	1	45	(0)	3423001
36	0.0	0.0	0.0	chr6	73653499	73653531	(97152448)	+	(CCCCCG)n	Simple_repeat	1	33	(0)	3423987
180	35.2	1.4	1.4	chr6	75429905	75429976	(95376003)	C	L2c	LINE/L2	(40)	3347	3276	3426196
2299	11.1	5.9	0.6	chr6	75429981	75430335	(95375644)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3426197
21	20.9	1.6	3.1	chr6	79537106	79537169	(91268810)	+	(CCACCT)n	Simple_repeat	1	65	(0)	3431371
2304	12.3	2.4	0.5	chr6	82297004	82297371	(88508608)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3434966
2739	10.2	0.3	0.3	chr6	82622235	82622609	(88183370)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3435405
2600	14.6	4.0	3.2	chr6	82622610	82622718	(88183261)	+	L1MC3	LINE/L1	7409	7516	(269)	3435403
1981	13.7	14.9	0.8	chr6	84025111	84025477	(86780502)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3437320
9467	13.0	3.3	4.5	chr6	91965173	91966772	(78839207)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3448346
2170	14.9	3.5	0.6	chr6	91966773	91967136	(78838843)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3448346
1639	15.4	12.9	3.6	chr6	93385752	93386087	(77419892)	C	THE1C	LTR/ERVL-MaLR	(3)	372	1	3450023
8905	13.6	7.7	0.3	chr6	93386088	93387551	(77418428)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3450023
1852	17.7	4.0	0.6	chr6	93387552	93387909	(77418070)	C	THE1C	LTR/ERVL-MaLR	(0)	375	5	3450023
82	1.3	0.0	1.2	chr6	93387912	93387992	(77417987)	+	(TAGA)n	Simple_repeat	1	81	(0)	3450024
4729	19.8	0.7	1.2	chr6	94535548	94536479	(76269500)	C	L1MA4	LINE/L1	(7)	6293	5362	3451450
2361	14.3	1.1	0.0	chr6	94536480	94536850	(76269129)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3451451
2329	15.1	0.5	0.0	chr6	103435556	103435926	(67370053)	C	THE1C	LTR/ERVL-MaLR	(0)	375	3	3462745
14	19.5	0.0	2.7	chr6	109441043	109441079	(61364900)	+	(CGC)n	Simple_repeat	1	37	(0)	3472169
683	33.6	2.7	0.4	chr6	109935020	109935273	(60870706)	C	MIR	SINE/MIR	(0)	262	3	3472885
2862	8.5	0.0	0.8	chr6	109935344	109935721	(60870258)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3472886
749	28.3	11.4	0.7	chr6	111880127	111880407	(58925572)	+	L4_A_Mam	LINE/RTE-X	1691	2005	(2985)	3476304
360	30.3	5.8	10.1	chr6	111880497	111880624	(58925355)	+	MLT1O	LTR/ERVL-MaLR	1	113	(429)	3476309
2493	12.1	0.8	1.6	chr6	111880625	111881002	(58924977)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3476310
360	30.3	5.8	10.1	chr6	111881003	111881090	(58924889)	+	MLT1O	LTR/ERVL-MaLR	114	207	(335)	3476309
932	26.7	6.4	0.7	chr6	111881137	111881513	(58924466)	C	MLT1J2	LTR/ERVL-MaLR	(15)	433	1	3476311
1824	12.4	8.6	6.4	chr6	112209820	112210207	(58595772)	+	MSTA	LTR/ERVL-MaLR	5	401	(27)	3476777
394	11.4	1.4	0.0	chr6	112210226	112210295	(58595684)	C	MER41B	LTR/ERV1	(82)	552	482	3476778
18	24.6	0.0	0.0	chr6	116100826	116100873	(54705106)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3482130
22149	10.3	1.2	3.0	chr6	118338047	118343006	(52462973)	C	L1PA7	LINE/L1	(1499)	4962	1	3485054
2496	10.2	0.5	7.2	chr6	118343060	118343461	(52462518)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3485056
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
1064	25.5	7.4	7.2	chr6	121208123	121208208	(49597771)	+	MLT1C	LTR/ERVL-MaLR	34	122	(345)	3488668
2444	12.6	2.4	1.4	chr6	121208209	121208579	(49597400)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3488669
1064	25.5	7.4	7.2	chr6	121208580	121208923	(49597056)	+	MLT1C	LTR/ERVL-MaLR	123	464	(3)	3488668
1927	16.8	3.3	3.6	chr6	121564323	121564687	(49241292)	+	MSTA	LTR/ERVL-MaLR	1	364	(0)	3489243
2273	12.2	3.5	1.6	chr6	121800642	121801008	(49004971)	+	THE1C	LTR/ERVL-MaLR	2	375	(0)	3489607
9482	12.6	7.2	3.9	chr6	121801011	121802583	(49003396)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3489607
2416	13.0	1.1	1.9	chr6	121802585	121802961	(49003018)	+	THE1C	LTR/ERVL-MaLR	2	375	(0)	3489607
2425	10.8	1.6	1.6	chr6	122555990	122556364	(48249615)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3490561
2618	10.4	0.5	1.1	chr6	122578722	122579098	(48226881)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3490589
2347	12.2	3.5	0.3	chr6	123848321	123848683	(46957296)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3492247
226	35.4	4.7	0.0	chr6	123848870	123848951	(46957028)	+	MamRTE1	LINE/RTE-BovB	2009	2094	(1718)	3492242
13	13.1	0.0	0.0	chr6	125790897	125790921	(45015058)	+	(CCT)n	Simple_repeat	1	25	(0)	3494827
2560	9.9	0.8	1.9	chr6	127648289	127648667	(43157312)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3497156
2233	12.7	3.5	1.4	chr6	127909266	127909632	(42896347)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3497488
2479	10.5	3.7	0.8	chr6	129587446	129587809	(41218170)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3499646
10107	11.6	2.9	4.5	chr6	129587810	129588121	(41217858)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1277	3499646
398	31.2	6.1	3.8	chr6	131410547	131410608	(39395371)	+	MIRc	SINE/MIR	7	70	(198)	3502291
2421	11.0	2.7	1.6	chr6	131410609	131410979	(39395000)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3502292
398	29.7	6.0	2.3	chr6	131410980	131411089	(39394890)	+	MIRc	SINE/MIR	71	177	(85)	3502291
2587	10.3	1.3	1.1	chr6	132224358	132224730	(38581249)	+	THE1C	LTR/ERVL-MaLR	2	375	(0)	3503568
10470	11.1	1.4	3.1	chr6	132224731	132226338	(38579641)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3503568
2301	12.4	11.5	1.1	chr6	134130926	134131307	(36674672)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	3506237
337	17.8	2.7	0.0	chr6	134464697	134464769	(36341210)	C	Alu	SINE/Alu	(3)	298	224	3506968
37	0.0	0.0	0.0	chr6	135180404	135180437	(35625542)	+	(T)n	Simple_repeat	1	34	(0)	3508087
2658	11.6	0.8	3.5	chr6	137833802	137834131	(32971848)	+	THE1B	LTR/ERVL-MaLR	1	333	(31)	3512059
2243	12.3	0.0	0.3	chr6	137834132	137834454	(32971525)	C	AluSp	SINE/Alu	(0)	313	1	3512060
1500	15.1	25.3	2.0	chr6	142461749	142462052	(28343927)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3518539
9978	12.2	3.7	1.2	chr6	142462053	142463142	(28342837)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	494	3518539
2845	11.1	0.9	0.0	chr6	142534975	142535389	(28270590)	+	THE1D-int	LTR/ERVL-MaLR	1213	1631	(0)	3518641
1719	16.9	6.6	2.5	chr6	142535390	142535754	(28270225)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3518641
2205	12.3	4.3	1.4	chr6	143378057	143378420	(27427559)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3519784
2727	10.6	1.6	1.3	chr6	144198483	144198856	(26607123)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3521020
449	33.3	0.7	2.0	chr6	144266496	144266642	(26539337)	C	MIR3	SINE/MIR	(6)	202	58	3521135
2541	10.0	4.3	0.6	chr6	144532261	144532621	(26273358)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3521551
2624	11.0	0.8	0.3	chr6	145158446	145158818	(25647161)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3522384
10237	12.2	3.2	0.4	chr6	145158819	145160354	(25645625)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3522384
2690	10.2	1.1	0.3	chr6	145618410	145618781	(25187198)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3522985
673	33.7	12.5	4.2	chr6	145618782	145619300	(25186679)	C	L2c	LINE/L2	(518)	2901	2317	3522984
2438	12.8	1.9	0.3	chr6	146098623	146098991	(24706988)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3523582
10508	12.2	2.6	0.3	chr6	146844555	146846096	(23959883)	C	THE1C-int	LTR/ERVL-MaLR	(2)	1578	1	3524581
2502	10.3	1.9	1.6	chr6	146846097	146846470	(23959509)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3524581
2628	11.3	0.8	1.6	chr6	150405426	150405803	(20400176)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3530165
412	33.6	8.6	2.4	chr6	150405804	150405879	(20400100)	+	L2a	LINE/L2	2560	2636	(783)	3530164
843	23.2	3.1	0.0	chr6	150405887	150406071	(20399908)	+	LTR40a	LTR/ERVL	328	518	(1)	3530166
2309	11.0	12.6	0.8	chr6	151047797	151048173	(19757806)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3531221
2707	9.6	0.3	0.5	chr6	151315695	151316070	(19489909)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3531783
2794	7.8	0.3	1.3	chr6	152450004	152450380	(18355599)	+	THE1C	LTR/ERVL-MaLR	3	375	(0)	3533547
2122	12.3	1.2	0.9	chr6	152918813	152919131	(17886848)	C	THE1C	LTR/ERVL-MaLR	(0)	375	56	3534192
210	38.4	4.8	0.0	chr6	152919138	152919236	(17886743)	C	L2c	LINE/L2	(238)	3149	3046	3534190
13	12.7	2.6	5.1	chr6	152982872	152982909	(17823070)	+	(GGCGCT)n	Simple_repeat	1	39	(0)	3534290
2276	14.0	0.8	1.7	chr6	154346525	154346881	(16459098)	C	THE1C	LTR/ERVL-MaLR	(0)	375	22	3536207
265	13.3	0.0	0.0	chr6	154528014	154528058	(16277921)	C	MLT2B1	LTR/ERVL	(0)	562	518	3536551
18	8.5	0.0	0.0	chr6	154528083	154528107	(16277872)	+	(TG)n	Simple_repeat	1	25	(0)	3536552
1921	21.1	7.1	3.2	chr6	154528110	154528168	(16277811)	C	MLT2B1	LTR/ERVL	(40)	480	423	3536551
2596	11.1	1.3	0.0	chr6	154528169	154528538	(16277441)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3536553
1921	21.1	7.1	3.2	chr6	154528539	154528939	(16277040)	C	MLT2B1	LTR/ERVL	(98)	422	1	3536551
1138	18.8	11.2	1.9	chr6	154717810	154718102	(16087877)	+	MLT1C	LTR/ERVL-MaLR	169	503	(2)	3536918
2596	11.3	0.5	0.8	chr6	154718135	154718510	(16087469)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3536923
469	23.4	7.6	0.7	chr6	154718513	154718662	(16087317)	C	L1MEd	LINE/L1	(2219)	3927	3768	3536905
601	34.8	5.4	6.9	chr6	154718669	154718755	(16087224)	C	L1MEd	LINE/L1	(6327)	776	699	3536905
1913	18.7	5.4	10.5	chr6	154718756	154719203	(16086776)	+	MLT1D	LTR/ERVL-MaLR	3	438	(67)	3536924
2692	10.2	1.1	0.0	chr6	155197543	155197913	(15608066)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3537807
593	29.0	11.7	2.1	chr6	155197914	155198034	(15607945)	+	Tigger8	DNA/TcMar-Tigger	419	566	(101)	3537806
1945	14.6	1.2	2.2	chr6	155754126	155754448	(15051531)	+	THE1C	LTR/ERVL-MaLR	1	320	(55)	3538529
13	0.0	0.0	0.0	chr6	155754452	155754468	(15051511)	+	(AAC)n	Simple_repeat	1	17	(0)	3538530
2837	9.9	0.0	0.0	chr6	156144760	156145134	(14660845)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3539062
261	36.1	3.7	6.5	chr6	157622869	157623007	(13182972)	C	L2c	LINE/L2	(5)	3382	3248	3541194
2528	11.1	1.1	2.1	chr6	157623159	157623537	(13182442)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3541195
212	24.6	6.4	1.4	chr6	157832338	157832411	(12973568)	C	L2c	LINE/L2	(37)	3350	3273	3541550
2631	8.4	5.1	0.8	chr6	157832502	157832860	(12973119)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3541551
446	26.6	7.8	6.2	chr6	159141128	159141320	(11664659)	+	LTR16A2	LTR/ERVL	251	450	(45)	3543700
2639	9.9	0.5	2.9	chr6	159141321	159141704	(11664275)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3543701
4695	20.0	6.2	1.7	chr6	164072056	164072569	(6733410)	C	L1MD2	LINE/L1	(17)	6342	5819	3550283
2156	14.6	5.1	1.9	chr6	164072570	164072932	(6733047)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3550284
4695	20.8	5.0	2.3	chr6	164072933	164073825	(6732154)	C	L1MD2	LINE/L1	(541)	5818	4882	3550283
1013	32.2	3.7	1.9	chr6	165894202	165894727	(4911252)	+	L3	LINE/CR1	3108	3643	(456)	3552512
243	26.1	5.7	13.5	chr6	166069463	166069477	(4736502)	+	MLT1K	LTR/ERVL-MaLR	363	377	(218)	3552748
2360	14.0	1.1	2.6	chr6	166069478	166069858	(4736121)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3552749
243	26.1	5.7	13.5	chr6	166069859	166069975	(4736004)	+	MLT1K	LTR/ERVL-MaLR	378	484	(111)	3552748
8955	13.6	0.6	0.5	chr6	167535657	167536182	(3269797)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1895	3554535
1848	10.1	11.6	0.9	chr6	168167105	168167444	(2638535)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3555213
388	35.6	4.6	3.7	chr6	168614431	168615747	(2190232)	+	TAR1	Satellite/telo	1	1328	(552)	3555632
2210	12.8	5.5	3.5	chr6	168621504	168621876	(2184103)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3555637
490	30.6	4.1	2.1	chr6	169298337	169298576	(1507403)	+	L1M5	LINE/L1	2644	2888	(3258)	3556324
1872	22.8	8.0	1.3	chr6	169298580	169298621	(1507358)	C	MLT2B1	LTR/ERVL	(0)	520	479	3556325
2663	9.2	1.1	0.8	chr6	169298622	169298995	(1506984)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3556326
1872	22.8	8.0	1.3	chr6	169298996	169299428	(1506551)	C	MLT2B1	LTR/ERVL	(42)	478	10	3556325
10680	12.6	1.8	0.9	chr6	169466764	169468324	(1337655)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	56	3556476
2133	13.4	0.3	1.9	chr6	169468324	169468648	(1337331)	C	THE1C	LTR/ERVL-MaLR	(52)	380	1	3556477
1677	14.2	11.3	5.8	chr6	170041841	170042221	(763758)	+	MSTA	LTR/ERVL-MaLR	24	428	(0)	3557089
36	20.4	6.1	4.5	chr6	170203826	170203972	(602007)	+	(AT)n	Simple_repeat	1	156	(0)	3557223
1809	9.6	3.4	1.8	chr6	170204000	170204285	(601694)	+	THE1C	LTR/ERVL-MaLR	85	375	(0)	3557224
2386	10.0	0.3	0.0	chr7	809646	809955	(158536018)	+	AluSq2	SINE/Alu	2	312	(1)	3558937
1826	14.2	5.0	12.0	chr7	809956	810119	(158535854)	+	THE1D	LTR/ERVL-MaLR	165	324	(57)	3558935
2293	7.8	0.0	0.0	chr7	810120	810401	(158535572)	+	AluY	SINE/Alu	1	282	(29)	3558938
243	31.8	1.8	6.8	chr7	1533061	1533178	(157812795)	C	MIR3	SINE/MIR	(3)	205	94	3560056
2195	12.4	6.8	0.8	chr7	2995215	2995572	(156350401)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3562418
2261	13.5	4.7	0.8	chr7	4121276	4121641	(155224332)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3564281
12	0.0	6.2	8.8	chr7	4121697	4121728	(155224245)	+	(CTGTT)n	Simple_repeat	1	34	(0)	3564282
2295	11.2	6.6	0.6	chr7	4395260	4395617	(154950356)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3564729
2322	10.5	0.0	0.0	chr7	4574018	4574313	(154771660)	C	AluSg7	SINE/Alu	(13)	296	1	3565130
2242	12.6	10.8	3.5	chr7	4574314	4574665	(154771308)	+	MSTA	LTR/ERVL-MaLR	44	428	(0)	3565129
1671	28.3	4.2	2.1	chr7	4574666	4574921	(154771052)	+	L1ME5	LINE/L1	5613	5870	(324)	3565128
435	30.9	10.4	3.5	chr7	4622376	4622485	(154723488)	+	LTR84b	LTR/ERVL	609	733	(28)	3565212
2199	9.7	4.8	3.2	chr7	4622486	4622805	(154723168)	+	THE1D	LTR/ERVL-MaLR	3	328	(53)	3565215
535	9.2	5.0	0.0	chr7	4622806	4622881	(154723092)	C	MADE1	DNA/TcMar-Mariner	(0)	80	1	3565216
2199	9.7	4.8	3.2	chr7	4622882	4622933	(154723040)	+	THE1D	LTR/ERVL-MaLR	329	381	(0)	3565215
233	22.5	8.5	6.6	chr7	6348316	6348418	(152997555)	+	MIRc	SINE/MIR	57	169	(99)	3569141
13	7.6	8.5	5.9	chr7	6348517	6348563	(152997410)	+	G-rich	Low_complexity	1	51	(0)	3569142
12	18.4	5.4	0.0	chr7	6348780	6348816	(152997157)	+	(GCCGC)n	Simple_repeat	1	39	(0)	3569143
2409	7.6	0.0	0.3	chr7	6373948	6374249	(152971724)	C	AluSq2	SINE/Alu	(7)	306	6	3569227
179	0.0	3.4	0.0	chr7	6577112	6577287	(152768686)	+	(ATAAA)n	Simple_repeat	1	182	(0)	3569724
2179	9.6	1.3	0.3	chr7	6577829	6578129	(152767844)	C	AluSq	SINE/Alu	(9)	304	1	3569725
2306	9.5	0.0	1.0	chr7	6634775	6635073	(152710900)	+	AluSg	SINE/Alu	8	304	(6)	3569863
39	0.0	0.0	4.4	chr7	6635074	6635118	(152710855)	+	(ACC)n	Simple_repeat	1	45	(0)	3569864
2587	10.8	1.6	1.1	chr7	6635123	6635418	(152710555)	C	THE1C	LTR/ERVL-MaLR	(75)	300	1	3569862
5154	16.2	0.6	1.4	chr7	9468406	9469347	(149876626)	+	L1PA15-16	LINE/L1	4170	5104	(1745)	3573741
1908	15.7	12.0	1.3	chr7	9469348	9469727	(149876246)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	3573745
9716	14.6	1.9	0.8	chr7	9469728	9470691	(149875282)	+	MSTA-int	LTR/ERVL-MaLR	1	985	(646)	3573745
1967	11.3	9.0	2.3	chr7	11268562	11268914	(148077059)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	3576010
8906	14.6	4.4	4.8	chr7	11865192	11866777	(147479196)	+	THE1C-int	LTR/ERVL-MaLR	2	1580	(0)	3576714
2228	14.0	2.9	1.1	chr7	11866778	11867145	(147478828)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3576714
2328	10.4	0.0	0.0	chr7	11867177	11867473	(147478500)	+	AluSc	SINE/Alu	1	297	(12)	3576715
2393	10.1	5.1	0.6	chr7	12794309	12794666	(146551307)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3577872
1944	16.9	0.9	0.3	chr7	14118272	14118604	(145227369)	+	THE1C	LTR/ERVL-MaLR	41	375	(0)	3579641
2701	9.7	1.1	0.5	chr7	14777371	14777743	(144568230)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3580403
242	28.6	1.5	7.6	chr7	14777772	14777915	(144568058)	C	L1ME4a	LINE/L1	(465)	5659	5525	3580402
2069	13.5	6.8	2.2	chr7	22863994	22864356	(136481617)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3591360
2300	10.7	7.5	1.4	chr7	23204616	23204967	(136141006)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3591899
2885	8.1	1.1	3.1	chr7	24936975	24937357	(134408616)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3594615
51	0.0	0.0	0.0	chr7	25893278	25893321	(133452652)	+	(GT)n	Simple_repeat	1	44	(0)	3596081
16	0.0	0.0	0.0	chr7	25893410	25893427	(133452546)	+	(A)n	Simple_repeat	1	18	(0)	3596082
252	27.1	4.0	1.0	chr7	25893492	25893588	(133452385)	C	L2c	LINE/L2	(0)	3387	3288	3596083
16	27.4	2.1	0.0	chr7	27662892	27662939	(131683034)	+	(GC)n	Simple_repeat	1	49	(0)	3598812
1446	20.7	5.0	2.4	chr7	28273158	28273423	(131072550)	+	MER58B	DNA/hAT-Charlie	1	278	(63)	3599805
2213	12.8	2.4	3.2	chr7	28273424	28273801	(131072172)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3599806
1370	26.1	5.2	7.7	chr7	37401285	37401458	(121944515)	+	MER39	LTR/ERV1	250	355	(352)	3613687
2606	11.6	0.3	0.8	chr7	37401459	37401833	(121944140)	C	THE1C	LTR/ERVL-MaLR	(0)	375	3	3613688
2081	12.6	3.8	4.3	chr7	38575399	38575770	(120770203)	+	THE1C	LTR/ERVL-MaLR	6	375	(0)	3615320
186	34.2	5.0	0.0	chr7	38576160	38576235	(120769738)	C	L3	LINE/CR1	(110)	3989	3910	3615321
3034	19.0	5.0	3.6	chr7	39561949	39562186	(119783787)	+	L1ME2	LINE/L1	5357	5594	(570)	3616716
2414	11.0	0.8	2.6	chr7	39562187	39562568	(119783405)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3616718
17	0.0	0.0	0.0	chr7	42932702	42932720	(116413253)	+	(A)n	Simple_repeat	1	19	(0)	3621861
3071	15.8	7.0	1.3	chr7	42932766	42933388	(116412585)	C	MER67B	LTR/ERV1	(0)	661	1	3621862
236	30.8	17.0	8.8	chr7	44082076	44082246	(115263727)	C	MIRc	SINE/MIR	(70)	198	5	3623777
13	9.3	0.0	0.0	chr7	44082525	44082547	(115263426)	+	(GCGG)n	Simple_repeat	1	23	(0)	3623778
398	18.1	7.2	7.9	chr7	44478864	44478876	(114867097)	+	L1ME1	LINE/L1	6042	6051	(128)	3624250
2541	10.1	4.0	0.0	chr7	44478877	44479233	(114866740)	C	THE1C	LTR/ERVL-MaLR	(0)	375	4	3624251
398	18.1	7.2	7.9	chr7	44479234	44479345	(114866628)	+	L1ME1	LINE/L1	6052	6166	(13)	3624250
28	6.4	3.9	1.9	chr7	44999656	44999706	(114346267)	+	(CCCCGTC)n	Simple_repeat	1	53	(0)	3625319
603	30.9	6.3	3.9	chr7	47992099	47992580	(111353393)	+	HAL1	LINE/L1	707	1200	(1307)	3629335
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
280	25.5	1.5	0.0	chr7	66075335	66075426	(93270547)	+	L2c	LINE/L2	3332	3426	(0)	3649156
2316	12.0	10.3	1.8	chr7	66735499	66735889	(92610084)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3650698
2098	13.4	12.6	1.6	chr7	67104199	67104578	(92241395)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3651516
2383	7.7	0.3	0.0	chr7	67303089	67303387	(92042586)	+	AluSx1	SINE/Alu	1	300	(12)	3651929
2229	10.2	5.2	2.4	chr7	67671757	67672126	(91673847)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3652746
744	29.1	4.2	2.3	chr7	67672162	67672418	(91673555)	+	MER110	LTR/ERV1	226	487	(4)	3652747
445	29.1	18.4	3.3	chr7	68240955	68241122	(91104851)	C	LTR16C	LTR/ERVL	(0)	489	273	3654072
1976	15.4	11.9	4.1	chr7	68241123	68241515	(91104458)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3654073
2406	10.8	3.1	1.6	chr7	69305016	69305390	(90040583)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3656373
270	28.6	2.3	6.7	chr7	69781980	69782069	(89563904)	C	MER5A	DNA/hAT-Charlie	(26)	163	78	3657367
2261	11.9	5.0	1.1	chr7	71645243	71645608	(87700365)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3660644
2734	8.7	1.3	0.0	chr7	78235378	78235746	(81110227)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	3675190
15	28.4	1.4	4.0	chr7	84334794	84334866	(75011107)	+	(CCCCTG)n	Simple_repeat	1	74	(0)	3683422
9428	13.0	3.6	2.2	chr7	85179961	85180078	(74165895)	+	THE1C-int	LTR/ERVL-MaLR	1470	1580	(0)	3684477
2194	16.4	0.8	1.3	chr7	85180079	85180455	(74165518)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3684477
1350	19.6	1.6	2.8	chr7	85180530	85180855	(74165118)	C	L1MC3	LINE/L1	(3)	7782	7461	3684479
384	31.6	4.9	5.4	chr7	86167758	86167795	(73178178)	C	L1MCc	LINE/L1	(6129)	294	258	3685636
1623	18.3	13.1	2.9	chr7	86167796	86168178	(73177795)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3685640
384	31.6	4.9	5.4	chr7	86168179	86168363	(73177610)	C	L1MCc	LINE/L1	(6166)	257	72	3685636
5854	23.1	7.2	1.7	chr7	87635771	87636800	(71709173)	C	L1ME3A	LINE/L1	(190)	7074	5986	3687488
2454	11.8	0.8	3.6	chr7	87636801	87637186	(71708787)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3687489
5854	23.9	9.8	2.1	chr7	87637187	87638339	(71707634)	C	L1ME3A	LINE/L1	(1252)	5985	4711	3687488
9343	10.1	10.9	4.0	chr7	95460187	95461697	(63884276)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3698003
2381	12.1	1.1	5.6	chr7	95461698	95462090	(63883883)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3698003
667	29.2	1.7	4.6	chr7	95462096	95462332	(63883641)	C	L1MDa	LINE/L1	(6389)	244	15	3698000
1564	11.8	2.6	12.8	chr7	98112883	98113073	(61232900)	C	AluJr4	SINE/Alu	(38)	274	111	3701954
2629	11.8	0.5	0.0	chr7	98113074	98113446	(61232527)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3701955
1564	11.8	2.6	12.8	chr7	98113447	98113560	(61232413)	C	AluJr4	SINE/Alu	(202)	110	1	3701954
22	19.5	0.0	3.5	chr7	100100466	100100522	(59245451)	+	(CCCCCG)n	Simple_repeat	1	57	(0)	3705858
348	31.3	1.7	0.9	chr7	100247167	100247282	(59098691)	C	MIRb	SINE/MIR	(75)	193	77	3706141
218	25.0	14.0	4.8	chr7	101252159	101252242	(58093731)	+	L2c	LINE/L2	3294	3386	(1)	3708330
830	9.3	4.8	0.0	chr7	101252592	101252709	(58093264)	+	L1PREC2	LINE/L1	6037	6160	(0)	3708331
282	31.7	6.8	1.8	chr7	101663220	101663386	(57682587)	C	L2	LINE/L2	(1224)	2195	2020	3709352
2895	9.7	0.8	0.0	chr7	101663391	101663762	(57682211)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3709353
258	21.0	1.6	0.0	chr7	101663809	101663870	(57682103)	C	MIRb	SINE/MIR	(142)	126	64	3709354
1816	16.0	0.0	1.7	chr7	101663879	101664171	(57681802)	+	AluJr	SINE/Alu	1	288	(24)	3709355
3617	20.3	4.2	6.5	chr7	102084858	102085334	(57260639)	C	L1M5	LINE/L1	(1978)	4168	3711	3710274
2729	9.2	1.3	0.0	chr7	102085335	102085703	(57260270)	+	THE1C	LTR/ERVL-MaLR	2	375	(0)	3710275
3617	20.3	4.2	6.5	chr7	102085704	102086336	(57259637)	C	L1M5	LINE/L1	(2436)	3710	3085	3710274
944	18.8	17.0	2.0	chr7	104188534	104188713	(55157260)	+	MER21C	LTR/ERVL	1	227	(711)	3713783
1809	12.7	15.4	2.4	chr7	104188714	104189084	(55156889)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3713784
2369	9.2	0.0	0.3	chr7	104944640	104944944	(54401029)	C	AluSx1	SINE/Alu	(8)	304	1	3714874
1975	13.1	5.8	1.4	chr7	118599109	118599472	(40746501)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3734136
1775	13.3	15.7	4.0	chr7	121189230	121189605	(38156368)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3737364
2467	13.4	0.3	0.0	chr7	125192565	125192936	(34153037)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	3742828
10044	12.4	6.2	0.3	chr7	125192941	125194472	(34151501)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3742828
2420	13.6	1.3	0.0	chr7	126062106	126062473	(33283500)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	3743947
419	10.0	1.6	0.0	chr7	128344082	128344141	(31001832)	+	U7	snRNA	2	62	(1)	3747039
2218	12.8	3.4	3.4	chr7	131322354	131322557	(28023416)	C	THE1D	LTR/ERVL-MaLR	(0)	381	184	3752602
2970	0.3	0.0	0.0	chr7	131322558	131322869	(28023104)	C	AluYb8	SINE/Alu	(6)	312	1	3752603
2147	14.2	9.8	1.0	chr7	136231307	136231696	(23114277)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3760328
13674	17.6	7.2	1.8	chr7	136767312	136769872	(22576101)	+	L1MA2	LINE/L1	18	2728	(4837)	3761055
2354	11.7	2.1	2.1	chr7	138430251	138430625	(20915348)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3763619
28	0.0	0.0	0.0	chr7	140398737	140398763	(18947210)	+	(T)n	Simple_repeat	1	27	(0)	3767338
1843	14.8	2.0	0.3	chr7	140398860	140399149	(18946824)	+	AluJr	SINE/Alu	1	295	(17)	3767339
23	15.1	0.0	2.2	chr7	140479183	140479228	(18866745)	+	(GCC)n	Simple_repeat	1	46	(0)	3767540
13	21.8	0.0	0.0	chr7	140479268	140479300	(18866673)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	3767541
13	11.3	0.0	12.2	chr7	143361334	143361382	(15984591)	+	(GGAGCGG)n	Simple_repeat	1	49	(0)	3771806
2537	6.4	0.0	0.3	chr7	144836403	144836699	(14509274)	+	AluSx3	SINE/Alu	1	296	(15)	3773751
20954	10.9	1.3	2.4	chr7	147112860	147113389	(12232584)	C	L1PA11	LINE/L1	(2467)	5114	4642	3776836
1860	15.1	6.4	3.0	chr7	147113390	147113751	(12232222)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3776838
20954	17.5	2.6	2.1	chr7	147113752	147117598	(12228375)	C	L1PA11	LINE/L1	(2940)	4641	7	3776836
260	40.3	3.9	2.5	chr7	148224353	148224632	(11121341)	C	L2	LINE/L2	(337)	3082	2799	3778431
2643	10.7	0.5	0.3	chr7	148224664	148225037	(11120936)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3778432
1999	17.1	4.1	2.6	chr7	148616228	148616611	(10729362)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3779097
1806	11.6	7.9	1.6	chr7	148616612	148616916	(10729057)	C	THE1D	LTR/ERVL-MaLR	(2)	379	54	3779098
541	26.8	13.5	2.5	chr7	148618011	148618172	(10727801)	C	L1ME4a	LINE/L1	(220)	5904	5705	3779102
2591	10.0	1.6	0.3	chr7	148618173	148618542	(10727431)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3779103
2085	14.4	12.6	0.8	chr7	149310597	149310973	(10035000)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3780499
2385	10.0	0.3	0.0	chr7	151533571	151533879	(7812094)	C	AluSp	SINE/Alu	(2)	311	2	3783608
1861	15.0	6.7	0.9	chr7	151533880	151534202	(7811771)	C	THE1D	LTR/ERVL-MaLR	(38)	343	1	3783605
816	20.4	10.0	4.1	chr7	151764986	151765100	(7580873)	C	MLT1C	LTR/ERVL-MaLR	(7)	367	265	3784010
2268	13.5	11.9	0.8	chr7	151765101	151765480	(7580493)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3784011
2264	12.5	1.6	2.4	chr7	153570202	153570384	(5775589)	C	THE1C	LTR/ERVL-MaLR	(0)	375	191	3787119
2132	11.4	8.5	0.9	chr7	153570385	153570720	(5775253)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3787120
1827	16.8	7.5	1.7	chr7	153671416	153671767	(5674206)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	3787253
2543	11.5	2.7	0.5	chr7	154933458	154933824	(4412149)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3788931
2377	10.9	3.9	2.4	chr7	155904802	155905176	(3440797)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3790227
278	30.3	4.3	5.4	chr7	155905177	155905219	(3440754)	C	MIRb	SINE/MIR	(115)	153	104	3790226
48	29.4	2.7	4.5	chr7	156892630	156892889	(2453084)	+	G-rich	Low_complexity	1	267	(0)	3791499
21	21.2	0.0	4.6	chr7	156893190	156893254	(2452719)	+	G-rich	Low_complexity	1	65	(0)	3791500
498	21.9	1.6	0.8	chr7	157880962	157881085	(1464888)	+	MLT1B	LTR/ERVL-MaLR	7	131	(259)	3792817
1157	21.8	3.9	0.3	chr7	157881247	157881540	(1464433)	+	MLT1B	LTR/ERVL-MaLR	70	374	(16)	3792818
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
648	29.1	4.1	5.0	chr8	10462547	10462763	(134675873)	+	L1M5	LINE/L1	2493	2712	(3434)	3808096
2524	11.8	0.5	1.3	chr8	10462764	10463141	(134675495)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3808097
648	28.3	4.3	5.2	chr8	10463142	10463369	(134675267)	+	L1M5	LINE/L1	2712	2937	(3209)	3808096
2106	10.8	0.0	0.4	chr8	13243040	13243316	(131895320)	+	AluSz6	SINE/Alu	33	308	(4)	3812362
1627	12.8	15.1	2.5	chr8	13243317	13243512	(131895124)	+	MSTA	LTR/ERVL-MaLR	195	416	(12)	3812361
922	35.2	8.9	3.3	chr8	13590992	13591233	(131547403)	C	L2	LINE/L2	(411)	3008	2755	3812924
2469	10.3	1.6	2.4	chr8	13591234	13591611	(131547025)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3812925
922	35.2	8.9	3.3	chr8	13591612	13592161	(131546475)	C	L2	LINE/L2	(665)	2754	2168	3812924
1164	27.6	5.2	4.1	chr8	17890338	17890609	(127248027)	+	L2a	LINE/L2	2911	3190	(236)	3818899
2275	12.7	3.5	3.2	chr8	17890610	17890983	(127247653)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3818900
1164	27.6	5.2	4.1	chr8	17890984	17891149	(127247487)	+	L2a	LINE/L2	3191	3354	(72)	3818899
2153	15.1	2.9	1.3	chr8	20133329	20133703	(125004933)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3822319
2542	6.8	0.0	1.0	chr8	26290862	26291171	(118847465)	C	AluSg	SINE/Alu	(3)	307	1	3832498
17	19.8	3.2	4.6	chr8	26291426	26291488	(118847148)	+	(CCGCC)n	Simple_repeat	1	65	(0)	3832499
26	20.3	0.0	1.7	chr8	26291539	26291598	(118847038)	+	(CGC)n	Simple_repeat	1	60	(0)	3832500
2129	11.0	4.7	6.9	chr8	30273677	30274023	(114864613)	+	THE1D	LTR/ERVL-MaLR	1	341	(40)	3839431
2281	11.6	0.0	0.0	chr8	30274024	30274325	(114864311)	C	AluSx1	SINE/Alu	(10)	302	1	3839432
1292	13.8	8.0	12.1	chr8	35607499	35607837	(109530799)	+	THE1C	LTR/ERVL-MaLR	1	324	(51)	3847805
37	0.0	0.0	2.6	chr8	35607838	35607876	(109530760)	+	(TAACCC)n	Simple_repeat	1	39	(0)	3847806
872	16.2	5.6	1.3	chr8	37992044	37992197	(107146439)	+	AluSz6	SINE/Alu	1	161	(151)	3851384
1955	13.2	7.3	3.4	chr8	37992198	37992550	(107146086)	C	THE1C	LTR/ERVL-MaLR	(7)	368	1	3851385
4533	10.8	4.9	1.4	chr8	37992551	37993246	(107145390)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	860	3851385
391	28.9	18.6	4.5	chr8	38705807	38706246	(106432390)	+	L2b	LINE/L2	1826	2352	(1067)	3852792
2223	13.8	2.6	2.1	chr8	38706247	38706623	(106432013)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	3852793
391	28.9	18.6	4.5	chr8	38706624	38706649	(106431987)	+	L2b	LINE/L2	2353	2373	(1046)	3852792
626	13.3	0.0	0.0	chr8	38706670	38706759	(106431877)	C	MER39B	LTR/ERV1	(20)	633	544	3852794
2762	9.1	0.0	1.8	chr8	40679350	40679731	(104458905)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3855730
2236	14.0	2.9	1.1	chr8	41191697	41192064	(103946572)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3856602
12	17.4	2.9	2.8	chr8	41577974	41578008	(103560628)	+	(GCCCC)n	Simple_repeat	1	36	(0)	3857273
1819	15.8	10.2	1.7	chr8	42212750	42213097	(102925539)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3858352
931	27.1	21.0	4.5	chr8	47398532	47400293	(97738343)	C	L2a	LINE/L2	(874)	2545	416	3861892
2875	9.1	0.3	0.5	chr8	55097059	55097434	(90041202)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3871969
1233	25.4	7.6	2.8	chr8	55097435	55097558	(90041078)	C	L2a	LINE/L2	(1154)	2265	2131	3871964
341	32.0	7.2	4.7	chr8	55097562	55097859	(90040777)	C	L2-3_Crp	LINE/L2	(1171)	925	620	3871970
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
2365	13.2	0.8	1.3	chr8	65934411	65934787	(79203849)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3886624
2354	11.2	0.0	0.3	chr8	66739409	66739695	(78398941)	C	AluSq2	SINE/Alu	(27)	286	1	3888004
2430	8.1	0.9	4.0	chr8	66739696	66740041	(78398595)	C	THE1C	LTR/ERVL-MaLR	(40)	335	1	3888005
1545	12.9	9.5	1.2	chr8	73217802	73218060	(71920576)	+	MSTA	LTR/ERVL-MaLR	1	283	(145)	3897648
929	16.9	3.2	6.1	chr8	73218059	73218254	(71920382)	+	MER21B	LTR/ERVL	676	865	(3)	3897649
2926	9.1	0.0	0.5	chr8	73373031	73373407	(71765229)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3897875
5008	16.4	1.0	3.2	chr8	73564690	73565125	(71573511)	+	MER6	DNA/TcMar-Tigger	1	417	(448)	3898148
1077	21.8	15.4	3.2	chr8	73565126	73565500	(71573136)	+	MSTB1	LTR/ERVL-MaLR	4	432	(0)	3898149
2001	13.1	7.9	3.0	chr8	73621102	73621463	(71517173)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3898225
790	25.8	0.0	0.0	chr8	78269671	78269837	(66868799)	+	L1MC2	LINE/L1	5469	5635	(698)	3904454
2346	13.0	1.6	0.8	chr8	78269840	78270211	(66868425)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3904455
2235	13.2	4.2	0.8	chr8	81696678	81697066	(63441570)	+	HSMAR2	DNA/TcMar-Mariner	3	405	(897)	3909634
1745	14.3	11.7	3.8	chr8	81697082	81697432	(63441204)	+	MSTA	LTR/ERVL-MaLR	1	394	(34)	3909635
2106	13.6	0.0	1.0	chr8	81697433	81697727	(63440909)	C	AluSq2	SINE/Alu	(21)	292	1	3909636
2523	25.4	8.3	6.6	chr8	88469329	88470789	(56667847)	C	HAL1M8	LINE/L1	(706)	2285	798	3918666
1898	16.4	1.9	1.6	chr8	88470791	88471161	(56667475)	C	THE1C	LTR/ERVL-MaLR	(3)	372	1	3918667
2720	13.9	2.3	0.2	chr8	88471162	88471586	(56667050)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	1198	3918667
11635	15.9	3.1	2.7	chr8	91159990	91160425	(53978211)	C	L1MA5	LINE/L1	(1598)	4545	4120	3922154
2097	13.2	13.6	1.1	chr8	91160426	91160799	(53977837)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3922157
11635	16.1	3.2	2.7	chr8	91160800	91162827	(53975809)	C	L1MA5	LINE/L1	(2024)	4119	2059	3922154
488	30.1	5.4	2.2	chr8	91919255	91919434	(53219202)	+	MIR	SINE/MIR	2	187	(75)	3923152
9620	14.1	2.6	1.0	chr8	91919456	91919485	(53219151)	+	Tigger1	DNA/TcMar-Tigger	10	38	(2380)	3923153
2221	12.7	4.0	3.2	chr8	91919486	91919860	(53218776)	C	THE1D	LTR/ERVL-MaLR	(1)	380	3	3923154
2226	11.0	5.9	1.1	chr8	101031369	101031725	(44106911)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3938017
2843	8.5	0.0	1.1	chr8	101749924	101750302	(43388334)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3939271
10260	11.3	4.6	0.7	chr8	102026163	102027679	(43110957)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3939672
1790	14.6	6.2	1.5	chr8	102027680	102028014	(43110622)	C	THE1C	LTR/ERVL-MaLR	(0)	375	24	3939672
369	28.3	7.0	1.5	chr8	102028025	102028229	(43110407)	+	L1MC5a	LINE/L1	2437	2598	(179)	3939673
21063	10.5	1.5	2.0	chr8	105258284	105260622	(39878014)	C	L1PA11	LINE/L1	(498)	7111	4799	3944908
2043	17.1	0.8	1.1	chr8	105260623	105260994	(39877642)	C	THE1C	LTR/ERVL-MaLR	(4)	371	1	3944910
21063	10.4	1.5	1.9	chr8	105260995	105261289	(39877347)	C	L1PA11	LINE/L1	(2783)	4798	4519	3944908
2298	14.0	0.8	1.3	chr8	118825615	118825991	(26312645)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3963913
790	26.2	2.9	3.8	chr8	118826023	118826364	(26312272)	C	MLT1H1	LTR/ERVL-MaLR	(200)	391	41	3963914
2866	10.4	0.3	0.8	chr8	119690961	119691336	(25447300)	+	THE1C	LTR/ERVL-MaLR	2	375	(0)	3965206
180	40.4	2.6	5.0	chr8	120445880	120445999	(24692637)	C	L2b	LINE/L2	(28)	3347	3231	3966592
206	33.3	1.4	0.0	chr8	120939304	120939372	(24199264)	+	MamTip2	DNA/hAT-Tip100	4	73	(232)	3967418
2253	12.0	4.3	0.6	chr8	120939390	120939750	(24198886)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3967419
1846	13.7	14.7	2.1	chr8	121755336	121755522	(23383114)	+	MSTA	LTR/ERVL-MaLR	1	223	(205)	3968798
34	0.0	0.0	0.0	chr8	121755523	121755551	(23383085)	+	(CT)n	Simple_repeat	1	29	(0)	3968799
1846	13.7	14.7	2.1	chr8	121755552	121755736	(23382900)	+	MSTA	LTR/ERVL-MaLR	224	428	(0)	3968798
188	16.0	19.4	0.0	chr8	122639419	122639468	(22499168)	+	MIR	SINE/MIR	35	96	(166)	3970244
880	18.0	13.8	2.7	chr8	125040464	125040488	(20098148)	C	Charlie4a	DNA/hAT-Charlie	(3)	505	486	3974804
2733	10.0	1.3	0.0	chr8	125040489	125040858	(20097778)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3974805
880	18.0	13.8	2.7	chr8	125040859	125041089	(20097547)	C	Charlie4a	DNA/hAT-Charlie	(23)	485	216	3974804
2075	14.8	2.6	2.6	chr8	128959632	128960012	(16178624)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3982305
482	31.6	7.6	3.4	chr8	128960013	128960186	(16178450)	C	MIR	SINE/MIR	(66)	196	13	3982304
8669	15.9	6.3	1.4	chr8	129814444	129814954	(15323682)	C	L1PA16	LINE/L1	(4518)	2800	2261	3983760
2738	7.3	4.5	1.1	chr8	129814955	129815316	(15323320)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3983764
429	32.2	4.8	5.2	chr8	130171099	130171278	(14967358)	+	L2c	LINE/L2	2911	3086	(301)	3984512
2128	14.7	5.2	0.6	chr8	130171279	130171641	(14966995)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3984513
429	32.2	4.8	5.2	chr8	130171642	130171712	(14966924)	+	L2c	LINE/L2	3087	3161	(226)	3984512
243	30.1	4.7	5.9	chr8	131101368	131101452	(14037184)	+	L2b	LINE/L2	2702	2785	(634)	3986323
2482	12.6	0.5	0.8	chr8	131101453	131101828	(14036808)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3986324
243	30.1	4.7	5.9	chr8	131101829	131101894	(14036742)	+	L2b	LINE/L2	2786	2851	(568)	3986323
307	33.2	4.8	13.2	chr8	134987235	134987276	(10151360)	C	L2b	LINE/L2	(0)	3375	3339	3993260
1795	15.4	9.2	0.9	chr8	134987277	134987623	(10151013)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	3993263
307	33.2	4.8	13.2	chr8	134987624	134988013	(10150623)	C	L2b	LINE/L2	(37)	3338	2981	3993260
275	33.6	0.0	4.5	chr8	141629986	141630097	(3508539)	C	L3	LINE/CR1	(79)	4020	3914	4003912
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
983	19.0	4.8	0.0	chr8	144233153	144233368	(905268)	C	L1MB3	LINE/L1	(3)	6180	5954	4007362
1068	22.4	3.6	0.7	chr8	144233505	144233801	(904835)	C	L1MB3	LINE/L1	(183)	6000	5695	4007363
7916	10.5	1.6	4.3	chr9	19685081	19686457	(118708260)	+	L1PA15	LINE/L1	4329	5690	(475)	4036741
2672	10.5	1.3	0.0	chr9	19686458	19686827	(118707890)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4036743
6123	9.2	2.1	0.7	chr9	19686828	19687296	(118707421)	+	L1PA15	LINE/L1	5691	6163	(2)	4036741
2438	12.9	0.5	1.3	chr9	20278848	20279223	(118115494)	C	THE1C	LTR/ERVL-MaLR	(0)	375	3	4037657
2063	13.0	9.4	2.0	chr9	26651512	26651863	(111742854)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4045930
1029	28.0	10.5	4.6	chr9	26651864	26652176	(111742541)	+	L2	LINE/L2	1354	1690	(1729)	4045929
2255	12.4	0.3	3.2	chr9	27169934	27170307	(111224410)	C	THE1C	LTR/ERVL-MaLR	(12)	363	1	4046784
34	16.9	0.0	0.0	chr9	36400879	36400944	(101993773)	+	(GCCCC)n	Simple_repeat	1	66	(0)	4060561
258	35.0	1.6	3.9	chr9	36750037	36750164	(101644553)	C	MIRc	SINE/MIR	(39)	229	105	4061384
192	23.1	0.0	0.0	chr9	37914038	37914089	(100480628)	+	MIR3	SINE/MIR	77	128	(80)	4063641
13	9.1	0.0	3.9	chr9	37914263	37914288	(100480429)	+	(CCA)n	Simple_repeat	1	26	(0)	4063642
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
3278	14.7	3.2	0.5	chr9	41274000	41274606	(97120111)	+	TAR1	Satellite/telo	1445	2068	(43)	4068410
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
3051	15.5	2.6	0.5	chr9	62838347	62838981	(75555736)	+	TAR1	Satellite/telo	1420	2068	(43)	4073704
763	29.1	7.2	4.8	chr9	76742646	76742894	(61651823)	+	L1ME3G	LINE/L1	50	298	(626)	4093090
2803	8.7	1.9	1.9	chr9	76742895	76743267	(61651450)	+	THE1C	LTR/ERVL-MaLR	3	375	(0)	4093092
763	29.0	7.2	4.7	chr9	76743268	76743476	(61651241)	+	L1ME3G	LINE/L1	299	506	(418)	4093090
2200	9.9	2.8	0.0	chr9	77097767	77098048	(61296669)	C	AluSc	SINE/Alu	(19)	290	1	4093742
26	20.9	1.8	0.0	chr9	79257119	79257174	(59137543)	+	(CT)n	Simple_repeat	1	57	(0)	4096976
2014	15.8	8.4	1.5	chr9	79262762	79263159	(59131558)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4096982
681	25.1	3.2	7.6	chr9	79643976	79644026	(58750691)	C	MIRb	SINE/MIR	(0)	268	224	4097549
2512	10.4	2.1	1.6	chr9	79644027	79644398	(58750319)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	4097550
681	25.1	3.2	7.6	chr9	79644399	79644544	(58750173)	C	MIRb	SINE/MIR	(45)	223	80	4097549
5305	11.6	1.2	4.0	chr9	80148962	80149594	(58245123)	C	L1PA17	LINE/L1	(14)	6152	5546	4098256
2138	12.6	12.6	0.8	chr9	80149595	80149971	(58244746)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4098257
13043	14.5	1.1	0.7	chr9	80149972	80152521	(58242196)	C	L1PA17	LINE/L1	(621)	5545	2981	4098256
2534	10.6	1.6	0.8	chr9	80392379	80392750	(58001967)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4098547
6026	14.2	6.4	1.3	chr9	80392751	80393431	(58001286)	C	Tigger3b	DNA/TcMar-Tigger	(438)	793	50	4098546
3142	9.8	0.7	0.9	chr9	86565992	86566433	(51828284)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	1140	4108089
1903	10.0	5.2	0.0	chr9	86566424	86566694	(51828023)	C	THE1D-int	LTR/ERVL-MaLR	(1343)	288	3	4108089
2438	13.1	1.6	1.1	chr9	86566706	86567084	(51827633)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4108089
1868	12.8	5.0	1.9	chr9	86567085	86567506	(51827211)	C	L1MA7	LINE/L1	(704)	5587	5147	4108087
2056	11.0	6.8	1.9	chr9	86653755	86654116	(51740601)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4108246
13	15.1	6.2	3.9	chr9	86946296	86946343	(51448374)	+	(CGCCGG)n	Simple_repeat	1	51	(0)	4108701
16	20.4	7.0	2.6	chr9	86946660	86946730	(51447987)	+	(CAGCCCAG)n	Simple_repeat	1	76	(0)	4108702
15	28.6	3.1	1.5	chr9	86946736	86946800	(51447917)	+	(CCG)n	Simple_repeat	1	67	(0)	4108703
13	26.1	0.0	0.0	chr9	86946800	86946840	(51447877)	+	G-rich	Low_complexity	1	41	(0)	4108704
2057	14.4	12.6	1.1	chr9	86951885	86952262	(51442455)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4108715
2747	24.1	5.1	3.7	chr9	92021962	92022167	(46372550)	C	L1MB8	LINE/L1	(229)	5949	5752	4116102
2432	10.8	5.9	0.0	chr9	92022168	92022520	(46372197)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4116104
2747	24.1	5.1	3.7	chr9	92022521	92022645	(46372072)	C	L1MB8	LINE/L1	(427)	5751	5618	4116102
1787	21.0	3.3	0.3	chr9	92022646	92022999	(46371718)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	4116105
2166	16.4	5.6	0.3	chr9	93748033	93748387	(44646330)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4118526
582	23.6	6.5	7.7	chr9	94914149	94914368	(43480349)	C	Charlie8	DNA/hAT-Charlie	(2043)	385	169	4120489
44	0.0	0.0	0.0	chr9	94914524	94914561	(43480156)	+	(GT)n	Simple_repeat	1	38	(0)	4120490
16	19.0	0.0	7.3	chr9	95426789	95426843	(42967874)	+	(CCCGG)n	Simple_repeat	1	55	(0)	4121215
682	24.7	2.4	0.0	chr9	95956214	95956375	(42438342)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	4122011
458	29.2	11.4	1.7	chr9	95956410	95956487	(42438230)	+	Charlie17a	DNA/hAT-Charlie	16	109	(108)	4122012
2340	13.3	2.1	0.8	chr9	95956488	95956857	(42437860)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4122013
458	29.2	11.4	1.7	chr9	95956858	95956959	(42437758)	+	Charlie17a	DNA/hAT-Charlie	110	216	(1)	4122012
2456	11.7	2.1	1.1	chr9	96095696	96096066	(42298651)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4122211
21	16.2	2.8	6.8	chr9	96417538	96417608	(41977109)	+	(CCGC)n	Simple_repeat	1	73	(0)	4122831
29	23.9	0.9	6.2	chr9	96417667	96417777	(41976940)	+	(GGC)n	Simple_repeat	1	112	(0)	4122832
2501	11.3	2.9	0.3	chr9	105167538	105167902	(33226815)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4137057
2123	17.2	7.2	12.9	chr9	105167903	105168335	(33226382)	C	MLT2B4	LTR/ERVL	(40)	516	120	4137056
85	1.3	0.0	0.0	chr9	106864040	106864116	(31530601)	+	(CT)n	Simple_repeat	1	77	(0)	4139698
17	16.4	0.0	0.0	chr9	106864157	106864190	(31530527)	+	(GCT)n	Simple_repeat	1	34	(0)	4139699
1502	27.4	6.9	1.9	chr9	110901931	110902263	(27492454)	+	L1MDa	LINE/L1	137	493	(6047)	4146977
2562	8.0	3.7	0.3	chr9	110902264	110902625	(27492092)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4146978
16	26.6	0.0	2.0	chr9	111631460	111631510	(26763207)	+	(GCT)n	Simple_repeat	1	51	(0)	4148269
190	25.9	6.5	0.0	chr9	121597885	121597942	(16796775)	C	L2b	LINE/L2	(5)	3370	3309	4167344
270	21.0	1.6	0.0	chr9	121613166	121613227	(16781490)	+	MIRb	SINE/MIR	177	239	(29)	4167372
2179	12.6	12.4	0.3	chr9	122601739	122602113	(15792604)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	4169242
557	5.4	0.0	5.1	chr9	123014581	123014658	(15380059)	C	THE1C	LTR/ERVL-MaLR	(0)	364	291	4169966
537	9.5	0.0	0.0	chr9	123014659	123014742	(15379975)	C	Alu	SINE/Alu	(9)	302	219	4169967
2189	7.6	2.8	3.7	chr9	123014743	123015070	(15379647)	C	THE1C	LTR/ERVL-MaLR	(50)	325	1	4169966
33	16.2	14.3	1.1	chr9	131394000	131394160	(7000557)	+	(GCGA)n	Simple_repeat	1	184	(0)	4187013
16	18.4	3.3	9.7	chr9	131394159	131394248	(7000469)	+	(GCCCC)n	Simple_repeat	1	93	(0)	4187014
1468	14.1	0.7	4.1	chr9	132058275	132058686	(6336031)	+	THE1C	LTR/ERVL-MaLR	1	369	(6)	4188143
606	28.8	5.2	2.4	chr9	132802674	132802929	(5591788)	+	MLT1G	LTR/ERVL-MaLR	303	587	(4)	4189531
2678	6.2	1.2	2.6	chr9	132802932	132803280	(5591437)	C	THE1C	LTR/ERVL-MaLR	(31)	344	1	4189532
433	25.2	8.4	11.7	chr9	132958931	132959107	(5435610)	+	MIRb	SINE/MIR	16	184	(84)	4189794
2650	11.1	0.8	0.0	chr9	132959108	132959478	(5435239)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	4189795
433	25.2	8.4	11.7	chr9	132959479	132959547	(5435170)	+	MIRb	SINE/MIR	185	253	(15)	4189794
274	0.0	0.0	0.0	chr9	134445014	134445051	(3949666)	+	MSTA-int	LTR/ERVL-MaLR	1588	1625	(6)	4192020
1714	12.5	16.8	0.6	chr9	134445050	134445402	(3949315)	+	MSTA	LTR/ERVL-MaLR	7	428	(0)	4192020
619	19.0	29.0	1.1	chr9	134445405	134445687	(3949030)	+	L1MC3	LINE/L1	7423	7784	(1)	4192021
1391	28.3	7.4	6.8	chr9	136751529	136751809	(1642908)	C	L1M4a1	LINE/L1	(608)	1971	1689	4194752
2261	13.0	11.9	1.6	chr9	136751810	136752192	(1642525)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4194753
868	15.6	0.0	3.0	chr9	136752202	136752336	(1642381)	C	FLAM_C	SINE/Alu	(10)	133	3	4194754
2479	12.6	0.5	0.8	chrX	5599212	5599587	(150441308)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4368752
11892	11.7	1.4	1.5	chrX	5599588	5600461	(150440434)	C	L1PA13	LINE/L1	(1000)	5146	4269	4368751
2230	10.3	7.2	0.8	chrX	19378328	19378678	(136662217)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4391245
1363	26.4	5.9	3.7	chrX	22192282	22192790	(133848105)	+	L2a	LINE/L2	2679	3195	(180)	4395651
1173	21.2	10.7	3.0	chrX	24270973	24271276	(131769619)	C	MLT1C	LTR/ERVL-MaLR	(89)	378	54	4399195
2113	9.3	2.7	17.6	chrX	24271277	24271719	(131769176)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4399196
265	26.9	1.3	2.5	chrX	33691024	33691103	(122349792)	C	MIRb	SINE/MIR	(0)	268	190	4412891
1458	22.6	6.7	2.5	chrX	33691143	33691565	(122349330)	+	MLT2B4	LTR/ERVL	5	456	(59)	4412892
237	16.7	0.0	0.0	chrX	33691600	33691647	(122349248)	+	HAL1b	LINE/L1	2200	2247	(174)	4412893
180	11.1	5.3	7.7	chrX	40171690	40171728	(115869167)	C	L2	LINE/L2	(2099)	1320	1283	4421887
2020	11.4	8.3	4.3	chrX	40760261	40760461	(115280434)	C	THE1D	LTR/ERVL-MaLR	(17)	364	165	4423041
2422	11.8	0.0	0.0	chrX	40760462	40760765	(115280130)	+	AluSq2	SINE/Alu	1	304	(9)	4423042
337	18.1	4.2	1.0	chrX	43206584	43206683	(112834212)	+	LTR29	LTR/ERV1	452	617	(90)	4427029
1747	13.2	0.4	0.4	chrX	43206681	43206939	(112833956)	+	THE1C	LTR/ERVL-MaLR	117	375	(0)	4427030
2719	10.2	0.3	1.1	chrX	44821832	44822209	(111218686)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4429820
1983	12.3	12.6	4.8	chrX	47250594	47250986	(108789909)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4433672
3489	21.4	1.9	3.5	chrX	49896157	49896907	(106143988)	C	L1ME1	LINE/L1	(760)	5784	5035	4438542
2172	11.1	5.0	6.2	chrX	49896908	49897293	(106143602)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4438546
10054	9.8	9.1	0.7	chrX	49897298	49898787	(106142108)	+	THE1D-int	LTR/ERVL-MaLR	5	1631	(0)	4438547
890	22.3	4.4	14.3	chrX	53435768	53436144	(102604751)	C	MER46C	DNA/TcMar-Tigger	(0)	338	1	4443744
823	29.8	16.6	0.7	chrX	53436145	53436299	(102604596)	+	L2a	LINE/L2	3243	3425	(1)	4443743
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
2795	22.1	4.3	1.6	chrX	91457485	91458286	(64582609)	+	L1PB4	LINE/L1	1100	2018	(4901)	4483517
1209	13.0	1.5	0.5	chrX	91458288	91458481	(64582414)	+	THE1C	LTR/ERVL-MaLR	180	375	(0)	4483518
1682	16.5	0.7	0.0	chrX	91458482	91458778	(64582117)	+	L1MA3	LINE/L1	6002	6300	(5)	4483519
87	4.7	1.7	1.7	chrX	103659667	103659781	(52381114)	+	(TCTT)n	Simple_repeat	1	117	(0)	4498952
1975	10.8	17.8	1.4	chrX	103659782	103659985	(52380910)	+	MSTA	LTR/ERVL-MaLR	205	428	(0)	4498951
8382	10.9	5.9	15.2	chrX	104762299	104763542	(51277353)	C	THE1C-int	LTR/ERVL-MaLR	(302)	1278	1	4500648
2257	10.6	9.6	1.7	chrX	104763543	104763887	(51277008)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4500648
10205	7.2	1.0	1.1	chrX	104763888	104765343	(51275552)	C	L1MA1	LINE/L1	(1321)	4825	3371	4500647
238	35.3	4.9	3.5	chrX	105192013	105192153	(50848742)	+	MamSINE1	SINE/tRNA-RTE	7	149	(141)	4501196
1611	12.4	20.6	0.7	chrX	105521524	105521822	(50519073)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	4501662
484	15.0	6.6	0.1	chrX	111430244	111430350	(44610545)	+	L1ME2z	LINE/L1	5830	5950	(218)	4509864
2768	7.8	0.3	1.3	chrX	111430351	111430727	(44610168)	+	THE1C	LTR/ERVL-MaLR	3	375	(0)	4509865
241	28.9	9.0	2.4	chrX	111430728	111430745	(44610150)	+	L1ME2z	LINE/L1	5951	5966	(202)	4509864
2702	8.6	1.1	1.1	chrX	114658922	114659296	(41381599)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4514372
2310	6.5	0.4	0.0	chrX	120497803	120498078	(35542817)	C	AluSx	SINE/Alu	(35)	277	1	4523057
7390	8.4	1.1	2.1	chrX	120600519	120601647	(35439248)	+	L1MA1	LINE/L1	6404	7520	(201)	4523246
2528	12.7	1.9	0.6	chrX	120601648	120602012	(35438883)	+	THE1C	LTR/ERVL-MaLR	5	374	(1)	4523250
863	13.4	0.0	4.2	chrX	124294088	124294285	(31746610)	C	AluJb	SINE/Alu	(10)	302	103	4528455
1886	14.1	14.0	1.1	chrX	124294286	124294657	(31746238)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4528456
863	13.4	0.0	4.2	chrX	124294658	124294759	(31746136)	C	AluJb	SINE/Alu	(210)	102	1	4528455
17996	20.7	3.5	1.3	chrX	128041693	128048556	(27992339)	C	L1PA16	LINE/L1	(11)	8150	10	4532931
2315	20.2	5.7	6.7	chrX	128130051	128130492	(27910403)	+	L1MB5	LINE/L1	5571	6004	(170)	4532985
1860	15.1	6.3	1.1	chrX	128130493	128130853	(27910042)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4532987
10510	13.1	0.7	1.6	chrX	128130854	128132499	(27908396)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	4532987
3874	23.9	9.8	7.3	chrX	130920896	130922463	(25118432)	C	L1M5	LINE/L1	(553)	5611	4003	4537288
2398	12.4	1.1	1.6	chrX	130922464	130922840	(25118055)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4537289
3874	23.9	8.9	7.2	chrX	130922841	130923064	(25117831)	C	L1M5	LINE/L1	(2144)	4002	3764	4537288
25	23.8	0.0	2.7	chrX	132488895	132488967	(23551928)	+	(CAGCGG)n	Simple_repeat	1	73	(0)	4539414
2434	12.7	5.0	0.8	chrX	134845977	134846341	(21194554)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4543483
2640	5.7	6.1	3.3	chrX	134874019	134874382	(21166513)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4543537
1189	11.9	19.6	0.0	chrX	134874383	134874567	(21166328)	C	MER30	DNA/hAT-Charlie	(0)	230	1	4543538
1368	23.7	2.2	5.0	chrX	146404064	146404441	(9636454)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	8	4560458
2089	13.7	2.4	2.9	chrX	146404442	146404816	(9636079)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	4560459
243	36.1	4.7	3.7	chrX	146404924	146405300	(9635595)	C	L1M6	LINE/L1	(1092)	5308	4928	4560460
3155	12.8	3.7	0.6	chrX	147099906	147100399	(8940496)	+	MSTA-int	LTR/ERVL-MaLR	1117	1626	(5)	4561381
1362	18.3	19.6	0.9	chrX	147100405	147100751	(8940144)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4561381
304	26.2	19.2	0.8	chrX	149997879	149998005	(6042890)	C	MER5A	DNA/hAT-Charlie	(8)	181	26	4565273
2133	11.1	17.8	0.8	chrX	149998170	149998524	(6042371)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4565274
648	26.0	1.1	4.3	chrX	149998544	149998728	(6042167)	C	MER20B	DNA/hAT-Charlie	(604)	179	1	4565275
356	21.3	10.3	0.8	chrX	152871358	152871480	(3169415)	+	MER5A	DNA/hAT-Charlie	28	163	(26)	4569523
14	20.9	0.0	5.5	chrX	153724559	153724631	(2316264)	+	G-rich	Low_complexity	1	68	(0)	4570654
306	20.3	3.0	0.0	chrY	10986737	10986800	(46240615)	C	AluYj4	SINE/Alu	(22)	289	224	4588603
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638