15	10.0	2.8	5.4	chr1	1058985	1059020	(247897402)	+	GA-rich	Low_complexity	1	37	(0)	1320
51	10.6	4.5	3.5	chr1	1170468	1170577	(247785845)	+	(CTCC)n	Simple_repeat	1	115	(0)	1431
12	22.5	4.3	5.6	chr1	1302363	1302431	(247653991)	+	(CCTGGAG)n	Simple_repeat	1	72	(0)	1569
11	10.6	0.0	10.5	chr1	1302400	1302437	(247653985)	+	G-rich	Low_complexity	1	38	(0)	1570
14	18.7	0.0	6.2	chr1	1335054	1335101	(247621321)	+	(CCAGCA)n	Simple_repeat	1	48	(0)	1600
16	7.3	11.1	2.0	chr1	1425880	1425924	(247530498)	+	(GGAGCT)n	Simple_repeat	1	50	(0)	1729
19	13.3	5.7	3.6	chr1	1426122	1426174	(247530248)	+	GA-rich	Low_complexity	1	56	(0)	1730
20	8.3	5.0	7.9	chr1	1540640	1540702	(247415720)	+	(CCT)n	Simple_repeat	1	61	(0)	1918
11	24.6	0.0	2.5	chr1	1599236	1599275	(247357147)	+	G-rich	Low_complexity	1	40	(0)	2033
15	23.1	1.9	3.6	chr1	1599531	1599584	(247356838)	+	(GGC)n	Simple_repeat	1	55	(0)	2034
15	27.4	5.0	3.6	chr1	1599643	1599722	(247356700)	+	(GC)n	Simple_repeat	1	84	(0)	2035
12	25.0	0.0	4.3	chr1	2019496	2019542	(246936880)	+	G-rich	Low_complexity	1	47	(0)	2779
12	20.6	2.4	2.4	chr1	2392124	2392164	(246564258)	+	G-rich	Low_complexity	1	42	(0)	3177
130	13.9	1.3	1.3	chr1	2401197	2401429	(246554993)	+	(CCTCCCT)n	Simple_repeat	1	236	(0)	3193
13	23.3	0.0	2.4	chr1	3352487	3352528	(245603894)	+	(CTTTC)n	Simple_repeat	1	42	(0)	3934
13	24.9	3.3	3.2	chr1	3651961	3652021	(245304401)	+	(CCCCTGT)n	Simple_repeat	1	63	(0)	4184
124	23.4	3.7	3.3	chr1	5747515	5747921	(243208501)	+	GA-rich	Low_complexity	1	422	(0)	7207
613	30.7	5.7	1.8	chr1	5747922	5748140	(243208282)	+	MIRb	SINE/MIR	23	250	(18)	7208
198	32.2	2.2	2.2	chr1	5828586	5828674	(243127748)	C	MamRTE1	LINE/RTE-BovB	(3560)	252	164	7336
1726	28.8	11.9	6.8	chr1	5896012	5897909	(243058513)	+	L1MC5a	LINE/L1	619	2625	(152)	7407
180	37.1	4.9	3.3	chr1	5980925	5981105	(242975317)	+	L2b	LINE/L2	3148	3331	(44)	7516
14	23.8	2.0	1.9	chr1	5993052	5993102	(242963320)	+	(CCCTGCC)n	Simple_repeat	1	52	(0)	7535
21	25.2	1.2	4.8	chr1	6148996	6149077	(242807345)	+	(TCC)n	Simple_repeat	1	83	(0)	7738
59	17.4	2.7	3.3	chr1	6244934	6245081	(242711341)	+	(CCCTC)n	Simple_repeat	1	152	(0)	7899
310	34.6	0.6	5.3	chr1	6246494	6246664	(242709758)	C	MamTip1	DNA/hAT-Tip100	(39)	228	66	7901
22	14.3	0.0	4.0	chr1	6260844	6260893	(242695529)	+	(GGCTCC)n	Simple_repeat	1	50	(0)	7921
488	29.9	17.3	0.8	chr1	6491749	6492004	(242464418)	C	L3	LINE/CR1	(7)	4092	3786	8317
344	32.3	12.4	1.5	chr1	6492017	6492217	(242464205)	+	MIRb	SINE/MIR	35	260	(8)	8318
92	19.2	1.2	5.4	chr1	7229406	7229663	(241726759)	+	G-rich	Low_complexity	1	261	(0)	9568
38	0.0	0.0	0.0	chr1	7942207	7942241	(241014181)	+	(GGA)n	Simple_repeat	1	35	(0)	10611
387	27.6	6.7	6.4	chr1	7942786	7942956	(241013466)	+	MIRb	SINE/MIR	59	238	(30)	10612
264	28.9	2.4	0.0	chr1	8155663	8155745	(240800677)	C	L4_B_Mam	LINE/RTE-X	(2442)	2499	2415	11038
16	19.2	0.0	4.4	chr1	8155771	8155815	(240800607)	+	GA-rich	Low_complexity	1	45	(0)	11039
1130	17.0	0.0	0.0	chr1	8155889	8156059	(240800363)	C	AluJb	SINE/Alu	(12)	300	130	11040
17	14.4	0.0	4.8	chr1	8217064	8217105	(240739317)	+	G-rich	Low_complexity	1	42	(0)	11191
16	20.2	2.1	2.1	chr1	8315097	8315148	(240641274)	+	(CTCCCT)n	Simple_repeat	1	52	(0)	11453
13	13.7	0.0	0.0	chr1	9201744	9201768	(239754654)	+	(CCCT)n	Simple_repeat	1	25	(0)	13138
50	0.0	1.9	1.9	chr1	9201769	9201821	(239754601)	+	(CCT)n	Simple_repeat	1	54	(0)	13139
24	18.8	0.0	3.5	chr1	9201823	9201880	(239754542)	+	(GCT)n	Simple_repeat	1	58	(0)	13140
31	4.2	1.9	3.7	chr1	9319389	9319444	(239636978)	+	(CTCCTCC)n	Simple_repeat	1	54	(0)	13369
14	31.3	1.9	0.0	chr1	9350574	9350627	(239605795)	+	(GTGT)n	Simple_repeat	1	55	(0)	13410
2028	19.4	4.3	2.4	chr1	9495641	9496093	(239460329)	C	L1MC1	LINE/L1	(99)	6234	5773	13716
17	27.1	1.3	3.9	chr1	10210638	10210713	(238745709)	+	(CACCGCC)n	Simple_repeat	1	77	(0)	15342
185	17.5	2.4	0.0	chr1	10430229	10430268	(238526154)	C	L2a	LINE/L2	(38)	3388	3348	15779
50	7.8	0.0	0.0	chr1	10639084	10639151	(238317271)	+	(TCGTCG)n	Simple_repeat	1	68	(0)	16166
20	19.2	0.0	0.0	chr1	10639157	10639198	(238317224)	+	(CCT)n	Simple_repeat	1	42	(0)	16167
29	24.3	1.9	4.6	chr1	10639213	10639319	(238317103)	+	(GCG)n	Simple_repeat	1	109	(0)	16168
322	34.1	10.6	5.3	chr1	11013213	11013515	(237942907)	+	L2c	LINE/L2	3066	3386	(1)	16859
125	16.2	2.1	0.4	chr1	11338015	11338251	(237618171)	+	(CTC)n	Simple_repeat	1	242	(0)	17485
2027	13.2	0.3	2.3	chr1	11343646	11343947	(237612475)	C	AluSx1	SINE/Alu	(16)	296	1	17499
1532	15.4	5.4	0.4	chr1	11473431	11473676	(237482746)	+	AluJb	SINE/Alu	37	295	(17)	17786
20	28.0	1.4	1.4	chr1	11650733	11650803	(237305619)	+	(CCT)n	Simple_repeat	1	72	(0)	18156
275	30.5	4.5	0.0	chr1	11934297	11934401	(237022021)	C	MIR	SINE/MIR	(36)	226	117	18775
13	24.2	0.0	5.6	chr1	11934632	11934685	(237021737)	+	(GGCGG)n	Simple_repeat	1	54	(0)	18776
14	21.9	2.3	2.2	chr1	11934781	11934824	(237021598)	+	(TGC)n	Simple_repeat	1	45	(0)	18777
25	4.3	8.3	0.0	chr1	12191555	12191602	(236764820)	+	(GCGGAGAGTA)n	Simple_repeat	1	52	(0)	19350
190	28.9	1.3	10.6	chr1	12629865	12629949	(236326473)	+	L2c	LINE/L2	3096	3172	(215)	20128
230	21.7	8.0	6.8	chr1	13965994	13966067	(234990355)	C	LTR80A	LTR/ERVL	(102)	481	407	22346
29	23.3	0.9	6.4	chr1	13966111	13966219	(234990203)	+	(CTCC)n	Simple_repeat	1	110	(0)	22347
28	16.6	3.3	0.0	chr1	14598733	14598793	(234357629)	+	(CTC)n	Simple_repeat	1	63	(0)	23491
13	16.7	7.5	0.0	chr1	14598768	14598807	(234357615)	+	(CCG)n	Simple_repeat	1	43	(0)	23492
1637	10.0	6.5	0.9	chr1	15604026	15604256	(233352166)	+	AluSz	SINE/Alu	1	245	(67)	25653
12	15.9	5.7	0.0	chr1	16087936	16087970	(232868452)	+	(CCTCCCT)n	Simple_repeat	1	37	(0)	26662
12	23.1	3.7	3.6	chr1	16613393	16613446	(232342976)	+	(CCGCGCC)n	Simple_repeat	1	56	(0)	27819
16	7.0	3.1	3.0	chr1	16613537	16613568	(232342854)	+	(CCTGCG)n	Simple_repeat	1	33	(0)	27820
17	17.8	0.0	0.0	chr1	16939206	16939243	(232017179)	+	G-rich	Low_complexity	1	38	(0)	28300
2192	14.8	0.3	0.0	chr1	17525721	17526030	(231430392)	+	AluSz	SINE/Alu	1	311	(1)	29641
322	29.5	35.8	0.0	chr1	17526391	17526557	(231429865)	+	MIRb	SINE/MIR	20	248	(14)	29642
512	28.2	3.4	0.0	chr1	17556305	17556474	(231399948)	+	MIR3	SINE/MIR	22	197	(11)	29726
2099	14.0	0.0	0.0	chr1	17725566	17725857	(231230565)	C	AluSz	SINE/Alu	(20)	292	1	30083
734	26.2	16.1	2.7	chr1	17726166	17726610	(231229812)	C	LTR16E2	LTR/ERVL	(0)	538	23	30084
19	23.7	1.6	1.6	chr1	17743257	17743317	(231213105)	+	G-rich	Low_complexity	1	62	(0)	30128
12	13.9	0.0	0.0	chr1	17743325	17743348	(231213074)	+	(CTG)n	Simple_repeat	1	24	(0)	30129
13	4.5	0.0	7.4	chr1	17844563	17844589	(231111833)	+	(GGA)n	Simple_repeat	1	27	(0)	30345
191	30.4	16.0	0.0	chr1	17844867	17844945	(231111477)	+	L2c	LINE/L2	3290	3383	(4)	30346
409	24.4	2.3	8.6	chr1	18576085	18576223	(230380199)	+	MLT1H	LTR/ERVL-MaLR	81	210	(339)	31959
20	14.8	2.1	2.1	chr1	18725400	18725446	(230230976)	+	(CCCTCCC)n	Simple_repeat	1	48	(0)	32277
81	21.9	3.1	2.2	chr1	20291329	20291551	(228664871)	+	(CT)n	Simple_repeat	1	230	(0)	35456
38	4.7	0.0	0.0	chr1	20342361	20342404	(228614018)	+	(TCC)n	Simple_repeat	1	44	(0)	35570
15	28.1	2.4	8.5	chr1	20430627	20430752	(228525670)	+	G-rich	Low_complexity	1	129	(0)	35753
235	22.9	6.2	1.6	chr1	20494160	20494221	(228462201)	+	LTR88a	LTR/Gypsy?	752	816	(0)	35898
421	26.9	9.0	0.9	chr1	20494772	20494962	(228461460)	C	MIR3	SINE/MIR	(3)	205	7	35900
30	12.5	0.0	1.9	chr1	20553764	20553817	(228402605)	+	(AGG)n	Simple_repeat	1	54	(0)	36031
245	28.7	12.8	3.4	chr1	21177346	21177493	(227778929)	C	MIRb	SINE/MIR	(45)	223	60	37303
25	17.0	3.8	4.8	chr1	21345380	21345459	(227610963)	+	(GCTCCCG)n	Simple_repeat	1	83	(0)	37717
13	14.9	6.0	5.7	chr1	22556526	22556575	(226399847)	+	GA-rich	Low_complexity	1	53	(0)	40382
484	32.1	3.6	10.6	chr1	22556687	22557101	(226399321)	C	L2	LINE/L2	(513)	2906	2522	40383
339	33.5	10.2	0.0	chr1	22880608	22880801	(226075621)	+	MIRb	SINE/MIR	22	237	(31)	41157
14	28.8	0.0	4.7	chr1	23217493	23217556	(225738866)	+	(CTC)n	Simple_repeat	1	64	(0)	41900
14	9.3	0.0	0.0	chr1	24108532	24108554	(224847868)	+	(CTC)n	Simple_repeat	1	23	(0)	44149
321	32.1	6.5	5.9	chr1	24108705	24108873	(224847549)	C	MIRc	SINE/MIR	(65)	203	34	44150
66	15.0	3.1	0.0	chr1	24297922	24298048	(224658374)	+	GA-rich	Low_complexity	1	131	(0)	44592
209	20.4	9.3	0.0	chr1	24298172	24298220	(224658202)	+	L2a	LINE/L2	3368	3421	(5)	44593
301	25.4	2.9	0.0	chr1	24298304	24298370	(224658052)	+	MIR3	SINE/MIR	31	99	(109)	44594
300	23.9	1.4	0.3	chr1	24337487	24337563	(224618859)	C	MIR3	SINE/MIR	(130)	138	63	44690
35	16.6	3.1	4.0	chr1	24502195	24502290	(224454132)	+	GA-rich	Low_complexity	1	99	(0)	45042
403	25.0	15.1	3.4	chr1	25662091	25662257	(223294165)	+	L2b	LINE/L2	3226	3387	(0)	47583
382	23.8	8.7	6.4	chr1	25662472	25662628	(223293794)	C	Charlie4z	DNA/hAT-Charlie	(3)	164	4	47584
677	29.1	6.9	3.6	chr1	25880314	25880566	(223075856)	+	MIR	SINE/MIR	4	265	(3)	48011
389	30.7	10.5	3.3	chr1	25880712	25880984	(223075438)	C	L2c	LINE/L2	(170)	3217	2923	48012
19	22.9	3.6	0.0	chr1	26161955	26162010	(222794412)	+	(GGC)n	Simple_repeat	1	58	(0)	48719
2228	9.3	0.7	0.0	chr1	26408260	26408548	(222547874)	+	AluSz	SINE/Alu	1	291	(21)	49285
15	22.2	4.3	0.0	chr1	27031863	27031909	(221924513)	+	(CCCT)n	Simple_repeat	1	49	(0)	50749
386	30.0	14.0	0.0	chr1	27032173	27032332	(221924090)	C	MIRc	SINE/MIR	(28)	240	55	50750
13	12.6	0.0	3.6	chr1	27099980	27100007	(221856415)	+	GA-rich	Low_complexity	1	28	(0)	50923
14	23.5	2.5	7.3	chr1	27100134	27100213	(221856209)	+	(GGCAGG)n	Simple_repeat	1	82	(0)	50924
15	27.5	6.7	0.0	chr1	27155046	27155120	(221801302)	+	(GCTCCA)n	Simple_repeat	1	80	(0)	51051
18	0.0	0.0	0.0	chr1	27155281	27155300	(221801122)	+	(A)n	Simple_repeat	1	20	(0)	51052
384	20.8	12.2	5.6	chr1	27350194	27350300	(221606122)	+	MIRb	SINE/MIR	119	233	(35)	51563
14	26.2	5.1	0.0	chr1	27357710	27357768	(221598654)	+	(CCTGCT)n	Simple_repeat	1	62	(0)	51574
47	2.2	0.0	0.0	chr1	27497321	27497367	(221459055)	+	(CTC)n	Simple_repeat	1	47	(0)	51878
532	24.4	6.3	1.2	chr1	27497412	27497577	(221458845)	+	MIRb	SINE/MIR	46	220	(48)	51879
27	24.1	5.0	1.0	chr1	27603753	27603859	(221352563)	+	(CTCT)n	Simple_repeat	1	111	(0)	52102
21	15.3	1.8	5.2	chr1	27603927	27603983	(221352439)	+	(TCCC)n	Simple_repeat	1	58	(0)	52103
19	22.0	6.9	4.8	chr1	27604061	27604176	(221352246)	+	(CCTCGC)n	Simple_repeat	1	124	(0)	52104
12	25.3	0.0	2.5	chr1	27604230	27604269	(221352153)	+	G-rich	Low_complexity	1	40	(0)	52105
15	24.9	0.0	2.0	chr1	27607474	27607522	(221348900)	+	G-rich	Low_complexity	1	49	(0)	52110
234	28.1	11.1	4.4	chr1	27656035	27656194	(221300228)	C	MIRb	SINE/MIR	(79)	189	18	52230
480	28.7	14.7	0.1	chr1	27656411	27656597	(221299825)	+	MIRb	SINE/MIR	6	215	(53)	52231
446	32.0	2.0	0.7	chr1	27872758	27872905	(221083517)	+	MIRb	SINE/MIR	54	203	(65)	52721
42	7.8	2.9	0.0	chr1	29453761	29453828	(219502594)	+	(TCC)n	Simple_repeat	1	70	(0)	56638
198	25.6	15.8	0.8	chr1	30084247	30084364	(218872058)	C	MIR3	SINE/MIR	(16)	192	54	57813
11	20.6	2.9	0.0	chr1	30853460	30853493	(218102929)	+	(CCCCAT)n	Simple_repeat	1	35	(0)	59227
319	27.3	6.6	0.0	chr1	30887649	30887776	(218068646)	+	L2b	LINE/L2	3235	3371	(4)	59302
252	27.6	5.4	1.9	chr1	30887821	30887927	(218068495)	+	MIR3	SINE/MIR	68	178	(30)	59307
15	14.7	0.0	0.0	chr1	31938446	31938475	(217017947)	+	(GCTG)n	Simple_repeat	1	30	(0)	61653
15	26.8	6.8	1.3	chr1	32179895	32179967	(216776455)	+	(GC)n	Simple_repeat	1	78	(0)	62270
14	15.3	0.0	0.0	chr1	32335758	32335786	(216620636)	+	(CCCCT)n	Simple_repeat	1	29	(0)	62646
19	15.5	3.7	3.6	chr1	32336172	32336255	(216620167)	+	(CTCCG)n	Simple_repeat	1	84	(0)	62647
15	12.2	6.0	5.7	chr1	32886433	32886482	(216069940)	+	(CCG)n	Simple_repeat	1	53	(0)	63958
12	15.7	2.6	5.0	chr1	33036893	33036931	(215919491)	+	(ACGC)n	Simple_repeat	1	40	(0)	64297
654	23.7	9.4	7.8	chr1	33037181	33037469	(215918953)	+	L1M5	LINE/L1	5514	5802	(360)	64298
1114	18.4	0.9	1.8	chr1	33153390	33153610	(215802812)	+	MER20	DNA/hAT-Charlie	1	219	(0)	64555
14	27.3	0.0	3.6	chr1	33181241	33181328	(215775094)	+	G-rich	Low_complexity	1	84	(0)	64626
229	34.5	4.5	0.0	chr1	34919411	34919494	(214036928)	C	L3b	LINE/CR1	(203)	5029	4942	67666
12	20.1	1.9	7.4	chr1	36178832	36178884	(212777538)	+	(GGCG)n	Simple_repeat	1	54	(0)	70292
12	23.3	3.7	3.6	chr1	36320846	36320899	(212635523)	+	(CCTCA)n	Simple_repeat	1	56	(0)	70644
20	22.5	0.0	6.6	chr1	36323645	36323653	(212632769)	+	(GGCGG)n	Simple_repeat	1	13	(63)	70647
12	8.4	0.0	6.9	chr1	36323654	36323682	(212632740)	+	G-rich	Low_complexity	1	29	(0)	70648
20	22.5	0.0	6.6	chr1	36323683	36323720	(212632702)	+	(GGCGG)n	Simple_repeat	14	76	(0)	70647
475	30.6	11.5	1.0	chr1	36323837	36324031	(212632391)	C	MIRb	SINE/MIR	(22)	246	29	70649
16645	13.5	3.9	5.2	chr1	36899716	36900284	(212056138)	+	L1MC1	LINE/L1	2275	2865	(3281)	71754
42	7.6	0.0	0.0	chr1	36900285	36900340	(212056082)	+	(CTC)n	Simple_repeat	1	56	(0)	71755
16645	13.5	3.9	5.2	chr1	36900341	36900360	(212056062)	+	L1MC1	LINE/L1	2866	2884	(3262)	71754
514	16.7	0.0	0.0	chr1	36900361	36900438	(212055984)	C	7SLRNA	srpRNA	(242)	78	1	71756
16645	13.5	3.9	5.2	chr1	36900439	36902797	(212053625)	+	L1MC1	LINE/L1	2885	5242	(904)	71754
218	27.1	0.0	2.0	chr1	37235534	37235582	(211720840)	C	MIR	SINE/MIR	(195)	67	20	72322
34	5.0	2.4	0.0	chr1	37241241	37241282	(211715140)	+	(GT)n	Simple_repeat	1	43	(0)	72335
252	36.2	11.2	3.7	chr1	37514970	37515379	(211441043)	+	L2	LINE/L2	2428	2872	(547)	72895
11	14.9	4.9	4.7	chr1	37764624	37764664	(211191758)	+	(CTCCAC)n	Simple_repeat	1	43	(0)	73397
2126	6.2	3.9	1.5	chr1	38012049	38012347	(210944075)	C	AluSg	SINE/Alu	(0)	310	1	73916
42	4.7	0.0	0.0	chr1	38040457	38040501	(210915921)	+	(GT)n	Simple_repeat	1	45	(0)	73962
27	0.0	0.0	0.0	chr1	38040502	38040531	(210915891)	+	(AG)n	Simple_repeat	1	30	(0)	73963
329	32.9	6.4	9.9	chr1	38213950	38214192	(210742230)	+	MIRb	SINE/MIR	25	258	(10)	74276
18329	10.6	2.6	1.3	chr1	38425527	38428474	(210527948)	+	HERVH-int	LTR/ERV1	1	2987	(4726)	74650
11	14.2	10.3	0.0	chr1	38991486	38991524	(209964898)	+	G-rich	Low_complexity	1	43	(0)	75807
14	14.1	7.7	0.0	chr1	39409005	39409043	(209547379)	+	(GGCGC)n	Simple_repeat	1	42	(0)	76679
12	19.7	2.3	4.4	chr1	39409058	39409101	(209547321)	+	(AGCC)n	Simple_repeat	1	45	(0)	76680
597	31.6	9.3	2.5	chr1	39609599	39610208	(209346214)	C	L2a	LINE/L2	(425)	2994	2339	77049
421	30.2	5.6	0.6	chr1	39645932	39646101	(209310321)	+	L2c	LINE/L2	2227	2405	(1014)	77129
17	22.4	7.4	2.3	chr1	39646262	39646342	(209310080)	+	(CCT)n	Simple_repeat	1	87	(0)	77130
2322	9.2	0.3	0.3	chr1	39883664	39883969	(209072453)	C	AluSx1	SINE/Alu	(6)	306	1	77621
495	23.4	18.0	3.6	chr1	40097466	40097687	(208858735)	C	MIR	SINE/MIR	(0)	262	2	78100
385	34.1	1.4	4.4	chr1	40773858	40774084	(208182338)	C	MIRc	SINE/MIR	(11)	257	38	79474
14	8.9	0.0	0.0	chr1	40782511	40782534	(208173888)	+	(CCCT)n	Simple_repeat	1	24	(0)	79494
216	22.6	3.1	1.6	chr1	40979134	40979196	(207977226)	+	L2b	LINE/L2	3307	3370	(5)	79987
989	18.8	0.0	0.0	chr1	41242869	41243033	(207713389)	C	FRAM	SINE/Alu	(11)	165	1	80411
17	22.3	0.0	5.2	chr1	41381482	41381539	(207574883)	+	(CCTCAT)n	Simple_repeat	1	58	(0)	80707
277	17.9	3.2	1.5	chr1	41416930	41417004	(207539418)	+	MIR1_Amn	SINE/MIR	76	157	(73)	80769
313	27.3	39.6	2.7	chr1	41417378	41417562	(207538860)	C	MIRb	SINE/MIR	(7)	261	8	80770
587	22.0	4.1	1.8	chr1	41424288	41425926	(207530496)	+	(TG)n	Simple_repeat	1	1706	(0)	80786
284	29.3	6.8	4.5	chr1	41486243	41486399	(207470023)	C	MIRb	SINE/MIR	(32)	236	76	80903
17	22.1	0.0	0.0	chr1	41513602	41513644	(207442778)	+	(CTCATC)n	Simple_repeat	1	43	(0)	80950
360	32.3	4.5	0.0	chr1	41513817	41513943	(207442479)	+	MIRc	SINE/MIR	112	244	(24)	80951
19	19.0	0.0	0.0	chr1	43358713	43358754	(205597668)	+	(GCCCC)n	Simple_repeat	1	42	(0)	84214
13	21.7	0.0	2.6	chr1	43550348	43550386	(205406036)	+	(GCCCC)n	Simple_repeat	1	39	(0)	84486
276	30.1	8.4	8.2	chr1	43550543	43550945	(205405477)	C	L2b	LINE/L2	(35)	3391	3011	84487
13	13.2	6.1	0.0	chr1	44031405	44031437	(204924985)	+	(GCCGC)n	Simple_repeat	1	35	(0)	85307
35	2.7	0.0	0.0	chr1	44239783	44239820	(204716602)	+	(AGAGGAGGG)n	Simple_repeat	1	38	(0)	85724
20	33.3	3.6	1.7	chr1	44261463	44261574	(204694848)	+	GA-rich	Low_complexity	1	116	(0)	85752
12	11.5	3.3	3.2	chr1	44417620	44417649	(204538773)	+	(CCTC)n	Simple_repeat	1	31	(0)	85980
14	19.7	4.2	2.0	chr1	44417992	44418039	(204538383)	+	(CGCCC)n	Simple_repeat	1	50	(0)	85981
12	17.4	1.9	9.1	chr1	44418248	44418301	(204538121)	+	GA-rich	Low_complexity	1	55	(0)	85982
202	21.7	0.0	0.0	chr1	44617723	44617768	(204338654)	C	MIR1_Amn	SINE/MIR	(81)	149	104	86380
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
182	21.1	0.0	0.0	chr1	46197981	46198018	(202758404)	+	MIRc	SINE/MIR	85	122	(146)	89527
26	5.4	0.0	2.4	chr1	47024002	47024042	(201932380)	+	(GGAGGGA)n	Simple_repeat	1	41	(0)	90860
21	11.3	1.8	7.1	chr1	47024043	47024056	(201932366)	+	GA-rich	Low_complexity	2	53	(0)	90861
36	19.1	2.4	6.3	chr1	47533110	47533232	(201423190)	+	(CTC)n	Simple_repeat	1	126	(0)	91809
200	26.4	1.9	0.0	chr1	47564414	47564466	(201391956)	+	L2b	LINE/L2	3282	3335	(52)	91866
12	29.3	0.0	0.0	chr1	47564500	47564541	(201391881)	+	(AATG)n	Simple_repeat	1	42	(0)	91868
595	23.7	14.1	2.2	chr1	47564634	47564930	(201391492)	+	MamGypLTR1c	LTR/Gypsy	64	444	(369)	91869
23	15.8	2.0	0.0	chr1	47997587	47997635	(200958787)	+	(CGCT)n	Simple_repeat	1	50	(0)	92702
20	14.5	0.0	5.9	chr1	47997697	47997748	(200958674)	+	(CCTCC)n	Simple_repeat	1	48	(0)	92703
18369	10.5	7.7	0.9	chr1	49994631	50000000	(198956422)	+	L1PBa	LINE/L1	3	5786	(1076)	95956
28	21.8	3.0	7.2	chr1	50968529	50968662	(197987760)	+	G-rich	Low_complexity	1	138	(0)	97721
14	22.6	0.0	0.0	chr1	52142246	52142281	(196814141)	+	(AGC)n	Simple_repeat	1	36	(0)	100279
184	36.2	10.2	0.6	chr1	52632756	52632933	(196323489)	+	MIRb	SINE/MIR	2	198	(70)	101303
17	20.5	1.6	6.2	chr1	53328160	53328222	(195628200)	+	(CCT)n	Simple_repeat	1	64	(0)	102876
246	27.4	5.6	2.9	chr1	53328347	53328485	(195627937)	C	L2c	LINE/L2	(222)	3165	3023	102877
14	15.1	6.2	3.9	chr1	54490686	54490733	(194465689)	+	(GCT)n	Simple_repeat	1	51	(0)	105203
189	24.2	5.7	0.0	chr1	55040106	55040171	(193916251)	+	MIR3	SINE/MIR	109	178	(30)	106405
13	16.5	0.0	5.3	chr1	55215174	55215211	(193741211)	+	(CGCGC)n	Simple_repeat	1	38	(0)	106639
13	20.1	0.0	2.8	chr1	55215315	55215350	(193741072)	+	(GGCGC)n	Simple_repeat	1	36	(0)	106640
17	8.1	0.0	0.0	chr1	55215359	55215384	(193741038)	+	(CCT)n	Simple_repeat	1	26	(0)	106641
632	31.9	0.9	1.9	chr1	56435495	56435708	(192520714)	+	MIRb	SINE/MIR	8	219	(49)	108814
33	7.0	0.0	0.0	chr1	56579466	56579510	(192376912)	+	(CCTCCTGCT)n	Simple_repeat	1	45	(0)	109122
15	15.3	0.0	0.0	chr1	56579513	56579541	(192376881)	+	(TGC)n	Simple_repeat	1	29	(0)	109123
19	10.4	0.0	0.0	chr1	58577094	58577124	(190379298)	+	(CAG)n	Simple_repeat	1	31	(0)	113109
23	5.7	2.6	2.5	chr1	59297041	59297079	(189659343)	+	(CCT)n	Simple_repeat	1	40	(0)	114621
16	19.3	0.0	8.1	chr1	61742354	61742415	(187214007)	+	(CCCGCCC)n	Simple_repeat	1	62	(0)	118746
14	15.5	0.0	9.6	chr1	62195023	62195074	(186761348)	+	G-rich	Low_complexity	1	52	(0)	119697
190	23.3	0.0	0.0	chr1	62297902	62297944	(186658478)	+	MER131	DNA?	34	76	(139)	119932
683	14.3	0.0	0.9	chr1	62298151	62298256	(186658166)	C	U6	snRNA	(2)	105	1	119933
334	18.5	0.0	5.8	chr1	62298257	62298325	(186658097)	+	MER5A	DNA/hAT-Charlie	125	189	(0)	119934
669	30.4	4.3	1.8	chr1	62311180	62311407	(186645015)	+	MIRb	SINE/MIR	26	259	(9)	119966
13	8.9	0.0	3.9	chr1	62311498	62311523	(186644899)	+	(TCC)n	Simple_repeat	1	26	(0)	119967
28	20.4	2.4	3.5	chr1	62688241	62688324	(186268098)	+	(GGC)n	Simple_repeat	1	86	(0)	120631
17	17.4	2.5	0.0	chr1	64470366	64470405	(184486017)	+	(CGGCTC)n	Simple_repeat	1	41	(0)	123959
23	15.3	0.0	5.4	chr1	65066726	65066781	(183889641)	+	(TCC)n	Simple_repeat	1	56	(0)	125013
17	0.0	0.0	0.0	chr1	65791915	65791933	(183164489)	+	(AC)n	Simple_repeat	1	19	(0)	126268
46	5.9	0.0	0.0	chr1	65791934	65791986	(183164436)	+	(CT)n	Simple_repeat	1	53	(0)	126269
18	22.1	2.1	0.0	chr1	67833185	67833232	(181123190)	+	(CTTC)n	Simple_repeat	1	49	(0)	129656
16	24.3	3.3	1.6	chr1	67833273	67833332	(181123090)	+	(CGCCG)n	Simple_repeat	1	62	(0)	129657
11	13.4	5.7	2.7	chr1	67833344	67833378	(181123044)	+	(CCGCCG)n	Simple_repeat	1	37	(0)	129658
19	6.8	3.2	0.0	chr1	67833416	67833446	(181122976)	+	(CCT)n	Simple_repeat	1	32	(0)	129659
19	6.2	2.8	2.7	chr1	68497219	68497254	(180459168)	+	(GCTGG)n	Simple_repeat	1	37	(0)	130753
489	26.8	12.4	3.7	chr1	77015563	77015915	(171940507)	C	L2c	LINE/L2	(90)	3297	2910	142236
124	23.5	2.1	1.2	chr1	77016016	77016346	(171940076)	+	(CCT)n	Simple_repeat	1	338	(0)	142240
458	29.7	8.6	4.2	chr1	77313357	77313639	(171642783)	+	MER102c	DNA/hAT-Charlie	3	329	(12)	142655
1167	19.1	6.5	3.5	chr1	77686801	77687252	(171269170)	+	SVA_E	Retroposon/SVA	432	856	(519)	143301
1549	15.7	8.5	3.3	chr1	77687253	77687779	(171268643)	+	SVA_F	Retroposon/SVA	421	857	(518)	143301
13	29.5	1.4	4.2	chr1	86914936	86915006	(162041416)	+	(CCCCGCT)n	Simple_repeat	1	72	(0)	156335
20	7.7	15.3	2.4	chr1	87328746	87328817	(161627605)	+	(GAGC)n	Simple_repeat	1	83	(0)	156907
21	29.0	2.6	3.1	chr1	87328818	87328847	(161627575)	+	G-rich	Low_complexity	3	103	(0)	156908
14	9.9	2.8	5.4	chr1	87328906	87328941	(161627481)	+	(CGCCG)n	Simple_repeat	1	37	(0)	156909
466	33.5	3.9	1.1	chr1	88225219	88225390	(160731032)	C	MIR3	SINE/MIR	(1)	207	31	158185
28	6.1	0.0	0.0	chr1	89524685	89524719	(159431703)	+	(CCT)n	Simple_repeat	1	35	(0)	159966
15	10.3	9.1	2.1	chr1	89524730	89524791	(159431631)	+	(CCGCCT)n	Simple_repeat	1	66	(0)	159967
11	20.8	0.0	2.9	chr1	89633168	89633202	(159323220)	+	(CGCGGC)n	Simple_repeat	1	35	(0)	160109
23	27.6	0.9	5.6	chr1	90728736	90728793	(158227629)	+	G-rich	Low_complexity	1	108	(0)	161685
31	11.4	0.0	0.0	chr1	90728794	90728842	(158227580)	+	(GGA)n	Simple_repeat	1	49	(0)	161686
38	0.0	0.0	2.7	chr1	92030450	92030486	(156925936)	+	(TG)n	Simple_repeat	1	37	(0)	163749
22	7.3	0.0	0.0	chr1	92030487	92030515	(156925907)	+	(AG)n	Simple_repeat	1	29	(0)	163750
14	18.3	5.7	3.6	chr1	100539548	100539600	(148416822)	+	(GCT)n	Simple_repeat	1	56	(0)	176730
920	15.4	7.8	1.3	chr1	100895397	100895552	(148060870)	+	AluJb	SINE/Alu	137	303	(9)	177179
13	23.6	1.9	3.7	chr1	108200192	108200244	(140756178)	+	G-rich	Low_complexity	1	54	(0)	186508
15	20.3	4.4	0.0	chr1	108661127	108661171	(140295251)	+	(CCGCGC)n	Simple_repeat	1	47	(0)	187089
1874	12.8	0.0	2.1	chr1	108703107	108703238	(140253184)	+	AluSx	SINE/Alu	6	134	(178)	187173
2295	11.4	0.0	0.0	chr1	108703239	108703544	(140252878)	+	AluSg	SINE/Alu	1	306	(4)	187174
14	9.3	0.0	0.0	chr1	109114125	109114147	(139842275)	+	(CAG)n	Simple_repeat	1	23	(0)	188011
257	24.0	1.3	1.3	chr1	109151173	109151248	(139805174)	+	MER5A	DNA/hAT-Charlie	89	164	(25)	188113
15	8.3	0.0	3.6	chr1	109151315	109151342	(139805080)	+	(AGGG)n	Simple_repeat	1	28	(0)	188114
17	22.1	0.0	5.2	chr1	110210799	110210856	(138745566)	+	(CCGCC)n	Simple_repeat	1	58	(0)	189741
16	18.8	1.4	9.5	chr1	110210857	110210871	(138745551)	+	(CCGC)n	Simple_repeat	1	74	(0)	189742
575	23.4	22.7	1.9	chr1	110482430	110482634	(138473788)	+	MER112	DNA/hAT-Charlie	2	261	(0)	190234
12	15.3	5.3	2.5	chr1	111204368	111204405	(137752017)	+	(CCCGCT)n	Simple_repeat	1	40	(0)	191233
22	24.0	0.0	0.0	chr1	111619785	111619838	(137336584)	+	(CGC)n	Simple_repeat	1	54	(0)	191804
43	2.3	0.0	0.0	chr1	111619876	111619919	(137336503)	+	(GGAGGAGGT)n	Simple_repeat	1	44	(0)	191805
95	25.1	3.8	3.7	chr1	111894870	111895237	(137061185)	+	GA-rich	Low_complexity	1	382	(0)	192267
15	26.3	0.0	0.0	chr1	112956340	112956376	(136000046)	+	(CG)n	Simple_repeat	1	37	(0)	194126
19523	13.1	6.1	3.8	chr1	113626217	113631419	(135325003)	C	L1MA3	LINE/L1	(2254)	5311	4	195291
13	29.4	2.1	7.1	chr1	116168120	116168216	(132788206)	+	GA-rich	Low_complexity	1	99	(0)	199253
711	14.8	19.8	0.0	chr1	116795801	116795942	(132160480)	+	LTR38B	LTR/ERV1	269	445	(165)	200279
19	8.3	0.0	0.0	chr1	116795943	116795968	(132160454)	+	(T)n	Simple_repeat	1	26	(0)	200280
457	29.4	5.2	0.7	chr1	116853272	116853418	(132103004)	+	MIRb	SINE/MIR	73	226	(42)	200380
19	12.6	4.4	2.1	chr1	116909989	116910033	(132046389)	+	GA-rich	Low_complexity	1	47	(0)	200486
29	27.9	0.9	3.6	chr1	116910072	116910182	(132046240)	+	GA-rich	Low_complexity	1	112	(0)	200486
45	2.3	0.0	0.0	chr1	117367314	117367358	(131589064)	+	(GAG)n	Simple_repeat	1	45	(0)	201206
14	4.7	0.0	4.2	chr1	117367469	117367492	(131588930)	+	(GCG)n	Simple_repeat	1	24	(0)	201207
15	16.4	2.9	0.0	chr1	119648153	119648186	(129308236)	+	(GCG)n	Simple_repeat	1	35	(0)	204334
57	3.4	0.0	0.0	chr1	119648189	119648248	(129308174)	+	(GCTG)n	Simple_repeat	1	60	(0)	204335
17	14.2	0.0	0.0	chr1	146019614	146019644	(102936778)	+	(CCT)n	Simple_repeat	1	31	(0)	211947
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
24	15.6	1.1	0.0	chr1	148522481	148522534	(100433888)	+	G-rich	Low_complexity	1	54	(0)	215837
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
12	20.4	2.4	2.4	chr1	151071222	151071262	(97885160)	+	G-rich	Low_complexity	1	42	(0)	220420
20	25.3	4.3	0.0	chr1	151612252	151612321	(97344101)	+	(CGG)n	Simple_repeat	1	73	(0)	221596
17	18.6	7.3	0.0	chr1	151831807	151831861	(97124561)	+	G-rich	Low_complexity	1	59	(0)	221948
586	31.4	1.2	6.2	chr1	151831992	151832249	(97124173)	C	MIRb	SINE/MIR	(3)	265	21	221949
12	20.8	0.0	2.9	chr1	151839600	151839634	(97116788)	+	(CCT)n	Simple_repeat	1	35	(0)	221961
12	8.4	0.0	6.9	chr1	153728480	153728508	(95227914)	+	GA-rich	Low_complexity	1	29	(0)	224670
18	34.4	0.0	0.0	chr1	153728659	153728731	(95227691)	+	(GCA)n	Simple_repeat	1	73	(0)	224671
26	22.2	3.8	1.2	chr1	153775501	153775580	(95180842)	+	(GCT)n	Simple_repeat	1	83	(0)	224742
321	26.6	3.1	3.9	chr1	153966966	153967094	(94989328)	+	MIRc	SINE/MIR	124	251	(17)	225150
1144	15.2	0.0	0.6	chr1	153967505	153967681	(94988741)	+	AluJb	SINE/Alu	137	312	(0)	225151
13	8.7	4.0	0.0	chr1	154502729	154502753	(94453669)	+	(CCACT)n	Simple_repeat	1	26	(0)	226305
17	17.9	2.2	2.1	chr1	154558757	154558802	(94397620)	+	(CCTCCT)n	Simple_repeat	1	47	(0)	226415
13	21.1	2.6	0.0	chr1	155017383	155017420	(93939002)	+	(CCCCT)n	Simple_repeat	1	39	(0)	227201
17	23.2	0.0	2.1	chr1	155017543	155017589	(93938833)	+	(GCC)n	Simple_repeat	1	47	(0)	227202
22	16.2	2.0	2.0	chr1	156076889	156076938	(92879484)	+	GA-rich	Low_complexity	1	51	(0)	229430
13	10.5	6.5	0.0	chr1	156421760	156421790	(92534632)	+	(CGGCTC)n	Simple_repeat	1	33	(0)	230116
13	15.7	2.7	2.7	chr1	156500883	156500931	(92455491)	+	G-rich	Low_complexity	1	49	(0)	230238
17	18.4	0.0	4.3	chr1	156501041	156501087	(92455335)	+	G-rich	Low_complexity	1	47	(0)	230239
14	4.9	0.0	0.0	chr1	156501142	156501162	(92455260)	+	(CCGC)n	Simple_repeat	1	21	(0)	230240
18	18.4	3.9	1.9	chr1	156669898	156669948	(92286474)	+	(CCT)n	Simple_repeat	1	53	(0)	230545
15	16.1	0.0	0.0	chr1	156670114	156670142	(92286280)	+	(CTC)n	Simple_repeat	1	29	(0)	230546
15	13.7	4.5	4.3	chr1	156670318	156670323	(92286099)	+	(CTC)n	Simple_repeat	1	44	(0)	230547
15	12.8	2.8	2.7	chr1	156670324	156670359	(92286063)	+	(CTCCT)n	Simple_repeat	1	37	(0)	230548
22	26.1	3.1	3.0	chr1	156751706	156751805	(92204617)	+	(CCTCCC)n	Simple_repeat	1	100	(0)	230674
16	11.6	0.0	0.0	chr1	156860097	156860125	(92096297)	+	(GCCCT)n	Simple_repeat	1	29	(0)	230886
737	28.9	6.4	2.8	chr1	157352935	157353219	(91603203)	+	LTR79	LTR/ERVL	1	296	(231)	231591
18	25.6	3.1	3.0	chr1	158077647	158077711	(90878711)	+	(CT)n	Simple_repeat	1	67	(0)	232633
13	18.9	2.8	0.0	chr1	158113627	158113662	(90842760)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	232694
442	28.3	10.8	0.0	chr1	160134762	160134927	(88821495)	+	MIRb	SINE/MIR	50	235	(33)	235293
12	24.1	0.0	2.4	chr1	160135077	160135117	(88821305)	+	G-rich	Low_complexity	1	41	(0)	235294
19	22.6	2.3	6.7	chr1	160374982	160375069	(88581353)	+	G-rich	Low_complexity	1	90	(0)	235650
13	19.8	0.0	2.7	chr1	162561644	162561680	(86394742)	+	(GCCCCC)n	Simple_repeat	1	37	(0)	239384
333	32.5	8.5	5.4	chr1	163321388	163321592	(85634830)	+	MIRb	SINE/MIR	42	253	(15)	240578
16	20.2	5.0	3.2	chr1	164558902	164558961	(84397461)	+	GA-rich	Low_complexity	1	63	(0)	242314
20	13.9	7.0	1.6	chr1	164559013	164559069	(84397353)	+	(CCCTCCT)n	Simple_repeat	1	61	(0)	242315
37	7.2	3.4	0.0	chr1	164559076	164559134	(84397288)	+	(CCT)n	Simple_repeat	1	61	(0)	242316
17	18.2	0.0	0.0	chr1	164559329	164559359	(84397063)	+	G-rich	Low_complexity	1	31	(0)	242317
207	27.3	11.0	0.8	chr1	164647415	164647536	(84308886)	+	MIR3	SINE/MIR	62	197	(11)	242441
12	24.1	0.0	2.4	chr1	166839354	166839394	(82117028)	+	(GGCGCC)n	Simple_repeat	1	41	(0)	245775
29	7.2	4.5	5.8	chr1	167630161	167630226	(81326196)	+	(CCTC)n	Simple_repeat	1	69	(0)	247029
23	14.2	2.7	7.9	chr1	167630227	167630234	(81326188)	+	(CCT)n	Simple_repeat	1	70	(0)	247030
2252	11.2	1.7	0.3	chr1	173862266	173862550	(75093872)	C	AluSg	SINE/Alu	(21)	289	1	256233
1757	13.4	2.4	0.4	chr1	173862551	173862796	(75093626)	C	AluSx1	SINE/Alu	(16)	296	46	256234
14	16.1	0.0	0.0	chr1	174022262	174022289	(74934133)	+	(CTG)n	Simple_repeat	1	28	(0)	256537
24	24.9	0.0	1.5	chr1	174022311	174022378	(74934044)	+	(CCT)n	Simple_repeat	1	68	(0)	256538
12	27.6	0.0	0.0	chr1	174022435	174022473	(74933949)	+	GA-rich	Low_complexity	1	39	(0)	256539
20	10.6	4.9	0.0	chr1	175599147	175599187	(73357235)	+	G-rich	Low_complexity	1	43	(0)	258921
578	29.4	0.6	2.4	chr1	178513545	178513711	(70442711)	C	MIRb	SINE/MIR	(78)	190	27	263192
21	16.0	1.6	6.2	chr1	180229723	180229785	(68726637)	+	(GCCCC)n	Simple_repeat	1	64	(0)	266082
19	11.7	2.7	0.0	chr1	180229938	180229975	(68726447)	+	(GGCGGA)n	Simple_repeat	1	39	(0)	266083
233	29.9	13.8	2.7	chr1	180239659	180239806	(68716616)	+	MIRb	SINE/MIR	58	224	(44)	266091
894	13.9	4.4	0.0	chr1	180240205	180240333	(68716089)	C	AluJo	SINE/Alu	(177)	135	1	266092
12	10.4	6.1	2.9	chr1	180927034	180927066	(68029356)	+	A-rich	Low_complexity	1	35	(0)	267181
73	14.6	2.4	4.1	chr1	181124450	181124616	(67831806)	+	(CTC)n	Simple_repeat	1	171	(0)	267510
18	0.0	0.0	0.0	chr1	181124740	181124759	(67831663)	+	(T)n	Simple_repeat	1	20	(0)	267511
11	10.2	2.7	7.9	chr1	181482618	181482654	(67473768)	+	(GCCTCT)n	Simple_repeat	1	38	(0)	268056
17	29.0	0.0	1.7	chr1	181482800	181482859	(67473563)	+	(CGCC)n	Simple_repeat	1	60	(0)	268057
12	22.4	3.9	3.8	chr1	184387016	184387066	(64569356)	+	(CCCT)n	Simple_repeat	1	53	(0)	272567
21	17.6	0.0	4.0	chr1	184387265	184387314	(64569108)	+	GA-rich	Low_complexity	1	50	(0)	272568
15	33.8	2.0	2.9	chr1	184387500	184387600	(64568822)	+	G-rich	Low_complexity	1	103	(0)	272569
56	12.0	1.5	7.2	chr1	192595352	192595487	(56360935)	+	GA-rich	Low_complexity	1	138	(0)	283599
519	28.8	4.6	0.0	chr1	197767960	197768105	(51188317)	+	MIR	SINE/MIR	88	240	(22)	290328
17	12.9	0.0	5.3	chr1	197768115	197768136	(51188286)	+	(GCT)n	Simple_repeat	1	22	(0)	290329
84	10.1	0.7	0.7	chr1	197768137	197768276	(51188146)	+	(CTC)n	Simple_repeat	1	141	(0)	290330
17	12.9	0.0	5.3	chr1	197768277	197768291	(51188131)	+	(GCT)n	Simple_repeat	2	15	(0)	290331
15	9.1	0.0	0.0	chr1	197768292	197768300	(51188122)	+	(ACT)n	Simple_repeat	1	24	(0)	290332
15	7.6	3.6	0.0	chr1	197902930	197902957	(51053465)	+	(CCCGC)n	Simple_repeat	1	29	(0)	290519
14	16.3	4.0	9.1	chr1	200739105	200739178	(48217244)	+	(GACGG)n	Simple_repeat	1	77	(0)	294915
19	23.2	6.0	2.2	chr1	200739179	200739185	(48217237)	+	(GGCGAC)n	Simple_repeat	4	87	(0)	294916
26	8.8	1.9	5.5	chr1	200739621	200739674	(48216748)	+	(GCG)n	Simple_repeat	1	55	(0)	294917
280	21.5	3.0	0.0	chr1	200890858	200890922	(48065500)	+	L2c	LINE/L2	3320	3386	(1)	295170
11	27.1	2.3	0.0	chr1	201024645	201024688	(47931734)	+	(CCCTGCC)n	Simple_repeat	1	45	(0)	295383
13	14.8	5.1	2.4	chr1	201024935	201024973	(47931449)	+	(CCTCC)n	Simple_repeat	1	41	(0)	295384
247	24.1	0.0	0.0	chr1	202236638	202236691	(46719731)	+	L2b	LINE/L2	3313	3366	(9)	297540
21	17.8	3.2	3.1	chr1	202251846	202251907	(46704515)	+	GA-rich	Low_complexity	1	64	(0)	297570
12	28.1	1.9	1.9	chr1	202808521	202808573	(46147849)	+	(CCCGC)n	Simple_repeat	1	54	(0)	298520
12	4.7	4.5	0.0	chr1	203327305	203327326	(45629096)	+	(CACC)n	Simple_repeat	1	23	(0)	299418
19	12.1	0.0	0.0	chr1	203327545	203327572	(45628850)	+	(A)n	Simple_repeat	1	28	(0)	299419
336	30.5	7.3	8.6	chr1	204012756	204013210	(44943212)	C	L2-3_Crp	LINE/L2	(1135)	961	513	300777
1319	24.4	1.9	1.0	chr1	204013314	204013619	(44942803)	C	L2a	LINE/L2	(1924)	1495	1187	300767
2392	8.9	0.0	0.3	chr1	204079344	204079646	(44876776)	C	AluSx	SINE/Alu	(10)	302	1	300942
2056	12.9	0.0	0.0	chr1	204366481	204366775	(44589647)	+	AluSz6	SINE/Alu	3	297	(15)	301426
235	28.1	9.4	0.0	chr1	204585301	204585396	(44371026)	+	L1ME4c	LINE/L1	674	779	(51)	301840
180	28.8	0.0	5.7	chr1	205012786	205012855	(43943567)	+	L3	LINE/CR1	1969	2034	(2065)	302629
15	13.9	0.0	0.0	chr1	205314429	205314452	(43641970)	+	(A)n	Simple_repeat	1	24	(0)	303197
281	32.4	16.4	4.2	chr1	205341491	205341643	(43614779)	+	L2b	LINE/L2	3068	3236	(139)	303248
2566	6.6	0.3	0.0	chr1	205341644	205341948	(43614474)	C	AluY	SINE/Alu	(5)	306	1	303249
2387	10.3	0.3	0.0	chr1	205484724	205485035	(43471387)	+	AluSp	SINE/Alu	1	313	(0)	303527
75	21.5	0.6	0.6	chr1	205485036	205485196	(43471226)	+	GA-rich	Low_complexity	1	162	(0)	303528
671	27.7	1.4	2.3	chr1	205485197	205485416	(43471006)	+	MIRc	SINE/MIR	15	236	(32)	303529
31	0.0	0.0	3.0	chr1	205504601	205504633	(43451789)	+	(TCC)n	Simple_repeat	1	33	(0)	303573
287	29.9	4.5	3.9	chr1	205519462	205519614	(43436808)	C	L3b	LINE/CR1	(154)	5078	4925	303596
15	21.8	0.0	7.9	chr1	208083806	208083868	(40872554)	+	(TCCCC)n	Simple_repeat	1	63	(0)	307570
685	8.3	0.0	0.0	chr1	208084005	208084100	(40872322)	+	L1MA1	LINE/L1	6207	6302	(0)	307571
25	10.7	3.9	1.9	chr1	209937987	209938038	(39018384)	+	(GGTGG)n	Simple_repeat	1	54	(0)	310411
12	20.4	2.4	2.4	chr1	210250776	210250816	(38705606)	+	(CCCCTG)n	Simple_repeat	1	42	(0)	310841
341	24.8	4.6	7.4	chr1	212468058	212468192	(36488230)	+	LTR33	LTR/ERVL	167	297	(218)	314564
13	22.0	2.2	2.2	chr1	212665501	212665545	(36290877)	+	(CTCTTCC)n	Simple_repeat	1	46	(0)	314923
14	12.2	0.0	0.0	chr1	212665650	212665676	(36290746)	+	(CTCCC)n	Simple_repeat	1	27	(0)	314924
15	11.6	0.0	3.3	chr1	213051371	213051400	(35905022)	+	(GGC)n	Simple_repeat	1	30	(0)	315638
61	25.9	3.3	2.3	chr1	213988061	213988073	(34968349)	+	(CTCTT)n	Simple_repeat	1	33	(186)	317039
24	22.4	8.4	3.5	chr1	213988074	213988204	(34968218)	+	(TCT)n	Simple_repeat	1	142	(0)	317040
61	25.9	3.3	2.3	chr1	213988205	213988272	(34968150)	+	(CTCTT)n	Simple_repeat	34	219	(0)	317039
49	2.2	0.0	0.0	chr1	213988411	213988456	(34967966)	+	(AG)n	Simple_repeat	1	46	(0)	317041
12	17.6	3.1	0.0	chr1	213989528	213989559	(34966863)	+	GA-rich	Low_complexity	1	33	(0)	317042
13	0.0	0.0	4.8	chr1	215567283	215567303	(33389119)	+	(TCC)n	Simple_repeat	1	21	(0)	319244
12	15.8	0.0	3.3	chr1	215567376	215567405	(33389017)	+	(GGC)n	Simple_repeat	1	30	(0)	319245
18	20.5	1.9	3.6	chr1	215567559	215567612	(33388810)	+	(CCG)n	Simple_repeat	1	55	(0)	319246
30	4.5	2.0	3.9	chr1	217983175	217983224	(30973198)	+	(GGA)n	Simple_repeat	1	51	(0)	322527
13	10.5	12.2	0.0	chr1	218345793	218345833	(30610589)	+	(GGAGCA)n	Simple_repeat	1	46	(0)	323091
34	7.5	0.0	0.0	chr1	218346051	218346093	(30610329)	+	(CA)n	Simple_repeat	1	43	(0)	323092
13	14.9	8.1	0.0	chr1	218346097	218346133	(30610289)	+	(TGC)n	Simple_repeat	1	40	(0)	323093
15	14.4	0.0	0.0	chr1	220527854	220527877	(28428545)	+	(A)n	Simple_repeat	1	24	(0)	326369
31	9.2	0.0	0.0	chr1	220528033	220528079	(28428343)	+	(GGA)n	Simple_repeat	1	47	(0)	326370
13	13.2	6.7	4.2	chr1	220528171	220528215	(28428207)	+	(CGCGC)n	Simple_repeat	1	48	(0)	326371
19	21.3	3.0	4.3	chr1	222548109	222548175	(26408247)	+	(TCC)n	Simple_repeat	1	69	(0)	329315
821	18.7	1.1	9.2	chr1	222907349	222907554	(26048868)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	329883
2318	11.2	0.3	0.0	chr1	222907670	222907974	(26048448)	+	AluSg	SINE/Alu	1	306	(4)	329884
255	26.5	7.5	1.0	chr1	223501024	223501122	(25455300)	+	LTR79	LTR/ERVL	75	180	(347)	330791
21	28.0	7.8	2.6	chr1	223501145	223501285	(25455137)	+	(CTTCT)n	Simple_repeat	1	152	(0)	330792
19	3.7	0.0	3.3	chr1	223845786	223845815	(25110607)	+	(GGC)n	Simple_repeat	1	30	(0)	331313
16	25.2	1.7	3.3	chr1	224114132	224114191	(24842231)	+	(GGC)n	Simple_repeat	1	61	(0)	331817
27	20.1	0.0	0.0	chr1	224434032	224434088	(24522334)	+	(CCT)n	Simple_repeat	1	57	(0)	332548
30	6.3	3.9	1.9	chr1	224434205	224434256	(24522166)	+	(GGA)n	Simple_repeat	1	54	(0)	332549
41	21.7	1.3	6.5	chr1	224434409	224434559	(24521863)	+	G-rich	Low_complexity	1	153	(0)	332550
23	21.6	0.0	0.0	chr1	224616317	224616327	(24340095)	+	(GCAGCG)n	Simple_repeat	1	21	(42)	332883
21	10.0	0.0	0.0	chr1	224616328	224616360	(24340062)	+	(GGC)n	Simple_repeat	1	33	(0)	332884
23	21.6	0.0	0.0	chr1	224616361	224616379	(24340043)	+	(GCAGCG)n	Simple_repeat	22	63	(0)	332883
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
189	29.0	3.7	0.0	chr1	226703765	226703851	(22252571)	+	MIRc	SINE/MIR	56	152	(116)	336313
314	28.8	8.5	1.1	chr1	227913953	227914138	(21042284)	+	MLT1F2	LTR/ERVL-MaLR	247	447	(113)	338052
49	22.9	3.8	3.6	chr1	228276059	228276243	(20680179)	+	GA-rich	Low_complexity	1	192	(0)	338519
40	0.0	0.0	0.0	chr1	228406869	228406905	(20549517)	+	(T)n	Simple_repeat	1	37	(0)	338659
19	31.2	4.0	1.0	chr1	228407064	228407163	(20549259)	+	G-rich	Low_complexity	1	104	(0)	338660
15	21.3	9.3	0.0	chr1	228735308	228735361	(20221061)	+	(CG)n	Simple_repeat	1	59	(0)	339120
18	10.0	0.0	2.9	chr1	228735416	228735449	(20220973)	+	(CCCG)n	Simple_repeat	1	34	(0)	339121
1561	17.9	1.6	4.7	chr1	229430487	229430805	(19525617)	+	AluJr	SINE/Alu	3	311	(1)	340254
16	23.3	2.2	0.0	chr1	229626252	229626296	(19330126)	+	(GCC)n	Simple_repeat	1	46	(0)	340622
18	26.4	1.4	2.8	chr1	230140355	230140425	(18815997)	+	(CCTGCC)n	Simple_repeat	1	72	(0)	341468
257	27.4	18.5	0.0	chr1	230175394	230175499	(18780923)	+	MIR	SINE/MIR	112	241	(21)	341507
75	15.9	3.8	0.6	chr1	230175527	230175684	(18780738)	+	(TCC)n	Simple_repeat	1	164	(0)	341508
31	23.6	3.3	7.9	chr1	230175685	230175708	(18780714)	+	(TTCCCC)n	Simple_repeat	2	189	(0)	341509
23	13.1	0.0	2.3	chr1	231163722	231163765	(17792657)	+	(GCC)n	Simple_repeat	1	44	(0)	343024
22	7.9	2.3	4.4	chr1	232630076	232630119	(16326303)	+	(CTC)n	Simple_repeat	1	45	(0)	345178
17	9.3	2.8	2.7	chr1	232630156	232630191	(16326231)	+	(CCGC)n	Simple_repeat	1	37	(0)	345179
24	12.3	2.3	0.0	chr1	233295575	233295618	(15660804)	+	(GCC)n	Simple_repeat	1	45	(0)	346165
67	20.3	0.6	3.1	chr1	233295855	233296013	(15660409)	+	(TTTC)n	Simple_repeat	1	160	(0)	346166
13	13.1	4.1	7.8	chr1	233328323	233328376	(15628046)	+	(CCGC)n	Simple_repeat	1	51	(0)	346215
12	25.8	3.1	4.5	chr1	233328482	233328546	(15627876)	+	(GCGGCGC)n	Simple_repeat	1	67	(0)	346216
406	28.4	18.0	1.9	chr1	234311806	234312010	(14644412)	+	MIRb	SINE/MIR	18	262	(6)	347660
16	25.9	0.0	1.9	chr1	234610920	234610971	(14345451)	+	G-rich	Low_complexity	1	52	(0)	348168
15	27.6	0.0	0.0	chr1	234611146	234611184	(14345238)	+	GA-rich	Low_complexity	1	39	(0)	348169
2426	8.1	0.0	0.7	chr1	235505383	235505689	(13450733)	C	AluSx1	SINE/Alu	(7)	305	1	349878
17	0.0	0.0	0.0	chr1	235505694	235505712	(13450710)	+	(T)n	Simple_repeat	1	19	(0)	349879
237	13.3	0.0	2.2	chr1	235505770	235505815	(13450607)	C	MLT1K	LTR/ERVL-MaLR	(30)	565	521	349880
2400	8.9	0.0	0.0	chr1	235505820	235506122	(13450300)	+	AluSx1	SINE/Alu	8	310	(2)	349881
15	26.9	0.0	2.1	chr1	236395443	236395497	(12560925)	+	GA-rich	Low_complexity	1	53	(0)	351539
1161	19.8	0.9	0.9	chr1	237055694	237055917	(11900505)	+	MLT1B	LTR/ERVL-MaLR	1	224	(166)	352697
952	11.6	2.3	0.0	chr1	238377793	238377921	(10578501)	+	AluY	SINE/Alu	1	132	(179)	354615
14	4.3	4.2	0.0	chr1	238377922	238377945	(10578477)	+	(CAAA)n	Simple_repeat	1	25	(0)	354616
23	12.3	2.2	2.1	chr1	239386589	239386634	(9569788)	+	GA-rich	Low_complexity	1	47	(0)	356035
15	26.4	5.1	0.0	chr1	243483272	243483330	(5473092)	+	(CCG)n	Simple_repeat	1	62	(0)	362672
26	6.3	0.0	0.0	chr1	244864025	244864058	(4092364)	+	(CTTCCT)n	Simple_repeat	1	34	(0)	364913
24	23.7	4.7	1.1	chr1	244864370	244864458	(4091964)	+	(GGCTGC)n	Simple_repeat	1	92	(0)	364914
278	26.7	2.6	0.0	chr10	1726990	1727064	(132070358)	+	L2b	LINE/L2	3294	3370	(5)	372866
2274	12.4	0.0	0.0	chr10	1944138	1944444	(131852978)	C	AluSg	SINE/Alu	(3)	307	1	373109
268	28.0	11.9	1.0	chr10	2247582	2247776	(131549646)	C	MLT1J1	LTR/ERVL-MaLR	(89)	355	137	373500
239	8.6	0.2	4.3	chr10	3408655	3409050	(130388372)	+	(GGA)n	Simple_repeat	1	397	(0)	375057
468	31.2	24.4	2.1	chr10	4144873	4145389	(129652033)	+	L2a	LINE/L2	1237	1927	(1492)	376113
21	0.0	7.5	4.7	chr10	4826284	4826323	(128971099)	+	(GCG)n	Simple_repeat	1	43	(0)	376971
19	12.0	0.0	2.6	chr10	5813435	5813472	(127983950)	+	(GGGAG)n	Simple_repeat	1	38	(0)	378339
13	11.5	2.2	8.7	chr10	5813816	5813860	(127983562)	+	G-rich	Low_complexity	1	46	(0)	378340
248	30.7	11.2	0.0	chr10	9017047	9017173	(124780249)	+	MIRc	SINE/MIR	15	157	(111)	383673
14	12.5	0.0	0.0	chr10	11165846	11165871	(122631551)	+	(CCCG)n	Simple_repeat	1	26	(0)	386567
13	4.5	0.0	7.4	chr10	11682562	11682588	(122114834)	+	(TTC)n	Simple_repeat	1	27	(0)	387319
63	4.9	4.4	3.4	chr10	11682589	11682702	(122114720)	+	(TCC)n	Simple_repeat	1	119	(0)	387320
19	13.4	0.0	0.0	chr10	11874620	11874653	(121922769)	+	(GGA)n	Simple_repeat	1	34	(0)	387682
24	17.7	1.2	8.3	chr10	12349458	12349540	(121447882)	+	GA-rich	Low_complexity	1	84	(0)	388745
14	14.4	5.0	2.4	chr10	13299914	13299953	(120497469)	+	(GGCGCC)n	Simple_repeat	1	42	(0)	390494
1095	10.7	26.7	2.2	chr10	13300261	13300485	(120496937)	C	AluJr	SINE/Alu	(12)	300	1	390495
316	19.6	15.9	6.3	chr10	13536504	13536661	(120260761)	C	LTR41C	LTR/ERVL	(51)	650	475	390953
425	26.8	7.2	5.8	chr10	15088022	15088282	(118709140)	+	L1ME4a	LINE/L1	5823	6087	(37)	393599
273	20.8	10.3	1.0	chr10	17191720	17191816	(116605606)	C	LTR16D	LTR/ERVL	(269)	382	276	396948
414	36.3	10.7	1.3	chr10	17199565	17199868	(116597554)	C	L2	LINE/L2	(437)	2982	2647	396957
12	0.0	0.0	11.1	chr10	18145952	18145978	(115651444)	+	(CCT)n	Simple_repeat	1	27	(0)	398596
2090	14.0	0.0	1.6	chr10	18146307	18146476	(115650946)	C	AluSx	SINE/Alu	(9)	303	137	398597
26	14.9	3.3	1.6	chr10	19816105	19816165	(113981257)	+	G-rich	Low_complexity	1	63	(0)	401152
731	19.5	0.0	0.0	chr10	21281338	21281460	(112515962)	C	FLAM_A	SINE/Alu	(19)	123	1	403314
15	7.3	0.0	8.6	chr10	21281463	21281497	(112515925)	+	(CTTT)n	Simple_repeat	1	35	(0)	403315
1702	20.8	2.7	2.5	chr10	21281504	21281908	(112515514)	C	L1MC1	LINE/L1	(6)	6327	5922	403316
12	18.4	0.0	9.6	chr10	21496082	21496133	(112301289)	+	(CCCT)n	Simple_repeat	1	52	(0)	403844
38	4.2	1.9	1.9	chr10	21516538	21516589	(112280833)	+	(CCT)n	Simple_repeat	1	53	(0)	403856
271	15.9	0.6	0.4	chr10	21717483	21717956	(112079466)	+	(TCC)n	Simple_repeat	1	477	(0)	404239
17	25.6	4.2	1.4	chr10	22321169	22321203	(111476219)	+	(CCGC)n	Simple_repeat	4	74	(0)	405118
54	21.9	2.5	2.5	chr10	22321360	22321365	(111476057)	+	(GAGGCG)n	Simple_repeat	1	39	(122)	405119
56	25.5	0.0	0.0	chr10	22321366	22321502	(111475920)	+	GA-rich	Low_complexity	1	137	(0)	405120
54	21.9	2.5	2.5	chr10	22321503	22321516	(111475906)	+	(GAGGCG)n	Simple_repeat	40	161	(0)	405119
12	19.9	2.3	4.4	chr10	22325817	22325860	(111471562)	+	(CCCGGC)n	Simple_repeat	1	45	(0)	405123
14	11.7	2.3	6.8	chr10	22340648	22340690	(111456732)	+	G-rich	Low_complexity	1	44	(0)	405128
13	21.2	0.0	2.5	chr10	22714013	22714052	(111083370)	+	G-rich	Low_complexity	1	40	(0)	405678
25	15.2	0.0	0.0	chr10	22714113	22714157	(111083265)	+	GA-rich	Low_complexity	1	45	(0)	405679
48	23.9	4.2	4.7	chr10	23344117	23344368	(110453054)	+	G-rich	Low_complexity	1	250	(0)	406652
217	22.1	8.1	4.2	chr10	24617933	24618003	(109179419)	C	MER91C	DNA/hAT-Tip100	(30)	110	37	408759
406	28.7	7.1	2.1	chr10	24617995	24618144	(109179278)	+	MIRb	SINE/MIR	22	167	(95)	408760
21	15.9	0.0	0.0	chr10	26860600	26860641	(106936781)	+	(GGTTGG)n	Simple_repeat	1	42	(0)	412438
15	18.9	2.2	4.3	chr10	26860996	26861041	(106936381)	+	(CCT)n	Simple_repeat	1	47	(0)	412439
13	18.5	7.0	0.0	chr10	27745612	27745654	(106051768)	+	G-rich	Low_complexity	1	46	(0)	413919
11	24.1	0.0	0.0	chr10	30434680	30434713	(103362709)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	418706
11	20.7	0.0	2.9	chr10	31854789	31854823	(101942599)	+	A-rich	Low_complexity	1	35	(0)	420861
861	14.7	0.0	0.0	chr10	31854847	31854962	(101942460)	+	AluJo	SINE/Alu	1	116	(196)	420862
71	16.6	6.9	0.0	chr10	31854986	31855158	(101942264)	+	GA-rich	Low_complexity	1	185	(0)	420863
12	11.6	3.3	3.2	chr10	33336660	33336689	(100460733)	+	(GGCA)n	Simple_repeat	1	31	(0)	423104
715	29.9	3.2	0.0	chr10	34113686	34113917	(99683505)	+	MIRb	SINE/MIR	12	255	(13)	424293
2023	15.9	0.0	1.6	chr10	34113977	34114285	(99683137)	+	AluJr	SINE/Alu	3	306	(6)	424294
37	27.4	3.7	4.1	chr10	35640753	35640941	(98156481)	+	(GCC)n	Simple_repeat	1	196	(0)	426868
27	16.4	5.6	4.3	chr10	35640872	35640960	(98156462)	+	(CGG)n	Simple_repeat	1	94	(0)	426869
13	25.9	0.0	2.3	chr10	35643358	35643400	(98154022)	+	(GCC)n	Simple_repeat	1	43	(0)	426872
12	19.9	2.9	0.0	chr10	35643412	35643446	(98153976)	+	G-rich	Low_complexity	1	36	(0)	426873
60	27.1	6.0	0.0	chr10	35643632	35643847	(98153575)	+	(TC)n	Simple_repeat	1	229	(0)	426874
19	8.5	12.0	0.0	chr10	42962652	42962701	(90834721)	+	(GCTCTCT)n	Simple_repeat	1	56	(0)	432801
19	15.9	2.4	0.0	chr10	43648829	43648870	(90148552)	+	(GCCGGC)n	Simple_repeat	1	43	(0)	433924
20	19.8	1.6	4.6	chr10	44385138	44385201	(89412221)	+	(GGCGG)n	Simple_repeat	1	65	(0)	434789
918	29.1	7.0	5.2	chr10	45000001	45000445	(88796977)	C	L2	LINE/L2	(801)	2618	2165	435513
338	28.2	8.1	2.9	chr10	45000468	45000650	(88796772)	+	MIRb	SINE/MIR	14	210	(52)	435514
24	20.4	3.5	4.5	chr10	45001106	45001191	(88796231)	+	G-rich	Low_complexity	1	89	(0)	435515
16	23.5	6.4	2.4	chr10	45672536	45672613	(88124809)	+	(CGCCAG)n	Simple_repeat	1	83	(0)	436407
13	36.1	0.0	2.6	chr10	45672635	45672657	(88124765)	+	(GCCC)n	Simple_repeat	1	76	(0)	436408
14	26.7	0.0	3.8	chr10	45672658	45672710	(88124712)	+	(CGCT)n	Simple_repeat	1	53	(0)	436409
12	24.7	4.4	4.2	chr10	46556178	46556245	(87241177)	+	G-rich	Low_complexity	1	71	(0)	437854
11	24.3	4.0	1.9	chr10	46556353	46556402	(87241020)	+	G-rich	Low_complexity	1	52	(0)	437855
13	15.5	0.0	3.2	chr10	47403118	47403148	(86394274)	+	GA-rich	Low_complexity	1	31	(0)	439130
44	26.4	2.4	0.0	chr10	47403240	47403362	(86394060)	+	(GT)n	Simple_repeat	1	126	(0)	439131
796	26.2	4.7	1.4	chr10	48605698	48605952	(85191470)	C	MIRb	SINE/MIR	(1)	267	3	440778
36	0.0	0.0	0.0	chr10	50991311	50991343	(82806079)	+	(GCC)n	Simple_repeat	1	33	(0)	444194
32	0.0	2.6	2.6	chr10	53150822	53150859	(80646563)	+	(TCC)n	Simple_repeat	1	39	(0)	447230
2107	13.2	2.0	0.0	chr10	53150860	53151155	(80646267)	C	AluSz	SINE/Alu	(10)	302	1	447231
19	12.8	0.0	0.0	chr10	59709884	59709917	(74087505)	+	(AGG)n	Simple_repeat	1	34	(0)	455972
13	27.4	0.0	6.2	chr10	59709957	59710020	(74087402)	+	(CCCGG)n	Simple_repeat	1	64	(0)	455973
873	26.3	23.4	0.8	chr10	62071911	62072512	(71724910)	C	LTR50	LTR/ERVL	(0)	795	17	459498
13	20.3	0.0	4.7	chr10	62818928	62818970	(70978452)	+	G-rich	Low_complexity	1	43	(0)	460647
363	23.9	5.1	7.1	chr10	68900517	68900647	(64896775)	+	MIR3	SINE/MIR	6	147	(121)	470388
21	12.1	0.0	0.0	chr10	69318820	69318855	(64478567)	+	(GAG)n	Simple_repeat	1	36	(0)	471359
28	4.5	4.0	3.9	chr10	69801822	69801871	(63995551)	+	(GGA)n	Simple_repeat	1	52	(0)	472288
17	10.7	7.1	2.2	chr10	69917892	69917933	(63879489)	+	(CTC)n	Simple_repeat	1	45	(0)	472481
1106	27.9	1.7	2.6	chr10	70633998	70634411	(63163011)	C	MER74A	LTR/ERVL	(93)	465	56	473856
12	17.6	0.0	5.6	chr10	70634414	70634449	(63162973)	+	(TTTTA)n	Simple_repeat	1	36	(0)	473857
3467	7.7	3.3	6.4	chr10	70634474	70635001	(63162421)	C	LTR10F	LTR/ERV1	(0)	511	1	473858
1869	16.7	1.0	0.3	chr10	71630963	71631267	(62166155)	+	AluJb	SINE/Alu	1	307	(5)	475643
339	34.6	0.4	14.0	chr10	71631268	71631481	(62165941)	C	L2a	LINE/L2	(1118)	2301	2124	475639
18	7.7	0.0	0.0	chr10	71964327	71964354	(61833068)	+	(GAG)n	Simple_repeat	1	28	(0)	476261
1706	10.0	14.4	0.4	chr10	72268397	72268646	(61528776)	+	AluSc	SINE/Alu	1	291	(18)	476909
16	23.7	4.4	2.8	chr10	73168204	73168271	(60629151)	+	G-rich	Low_complexity	1	71	(0)	478773
35	0.0	0.0	0.0	chr10	73168309	73168340	(60629082)	+	(GAG)n	Simple_repeat	1	32	(0)	478774
16	16.4	11.4	1.3	chr10	73785769	73785838	(60011584)	+	(CCCTCGG)n	Simple_repeat	1	78	(0)	479943
13	22.0	6.8	3.8	chr10	75100615	75100688	(58696734)	+	(GCTCCCT)n	Simple_repeat	1	79	(0)	482423
23	17.6	0.0	1.9	chr10	75111564	75111616	(58685806)	+	(CGCCCC)n	Simple_repeat	1	53	(0)	482444
18	16.1	1.9	5.5	chr10	75398685	75398738	(58398684)	+	(CCTCTC)n	Simple_repeat	1	55	(0)	483047
21	21.2	0.0	6.8	chr10	75398739	75398753	(58398669)	+	(TCCC)n	Simple_repeat	6	74	(0)	483048
41	11.9	0.0	0.0	chr10	77637464	77637528	(56159894)	+	(GAG)n	Simple_repeat	1	65	(0)	486308
38	4.8	0.0	0.0	chr10	77637587	77637630	(56159792)	+	(CCG)n	Simple_repeat	1	44	(0)	486309
16	4.5	0.0	0.0	chr10	77637738	77637760	(56159662)	+	(GCC)n	Simple_repeat	1	23	(0)	486310
19	18.0	1.9	3.6	chr10	77637758	77637811	(56159611)	+	G-rich	Low_complexity	1	55	(0)	486311
16	16.3	0.0	2.8	chr10	77638451	77638486	(56158936)	+	(GCA)n	Simple_repeat	1	36	(0)	486312
280	32.1	2.7	4.4	chr10	78292601	78292714	(55504708)	+	L2b	LINE/L2	3264	3375	(0)	487543
188	26.3	13.2	4.8	chr10	78292742	78292845	(55504577)	C	MIR3	SINE/MIR	(68)	140	27	487547
16	21.1	0.0	0.0	chr10	78303349	78303387	(55494035)	+	(CCTCC)n	Simple_repeat	1	39	(0)	487571
13	19.0	0.0	5.0	chr10	78303451	78303490	(55493932)	+	(CCGC)n	Simple_repeat	1	40	(0)	487572
45	11.8	6.5	2.6	chr10	78688959	78689066	(55108356)	+	(CCTCT)n	Simple_repeat	1	115	(0)	488256
24	33.6	4.9	1.2	chr10	79145061	79145222	(54652200)	+	(TCTC)n	Simple_repeat	1	170	(0)	489140
433	26.1	8.6	2.1	chr10	79145423	79145563	(54651859)	+	MIR	SINE/MIR	15	165	(97)	489141
207	27.2	16.5	1.2	chr10	79203745	79203826	(54593596)	+	MIR	SINE/MIR	57	153	(109)	489246
370	27.9	1.8	0.5	chr10	85919701	85919833	(47877589)	+	MIRb	SINE/MIR	4	145	(123)	498706
1385	9.8	2.5	0.0	chr10	86061804	86061997	(47735425)	C	MER107	DNA/hAT-Charlie	(0)	200	2	498925
34	5.3	0.0	0.0	chr10	86221880	86221919	(47575503)	+	(CCT)n	Simple_repeat	1	40	(0)	499160
209	31.1	0.9	5.4	chr10	86222168	86222279	(47575143)	C	MIR1_Amn	SINE/MIR	(80)	150	44	499161
332	28.9	2.3	8.3	chr10	86282983	86283287	(47514135)	+	L2c	LINE/L2	2938	3222	(153)	499243
18	20.3	2.2	0.0	chr10	86521644	86521688	(47275734)	+	(GCC)n	Simple_repeat	1	46	(0)	499653
14	13.2	2.9	2.8	chr10	86521953	86521987	(47275435)	+	G-rich	Low_complexity	1	36	(0)	499654
17	17.1	4.7	3.6	chr10	86756475	86756529	(47040893)	+	G-rich	Low_complexity	1	55	(0)	500080
17	16.1	2.3	2.2	chr10	86756568	86756611	(47040811)	+	(CCCGCC)n	Simple_repeat	1	45	(0)	500081
13	13.1	0.0	0.0	chr10	86756625	86756649	(47040773)	+	(CGG)n	Simple_repeat	1	25	(0)	500082
16	3.5	0.0	10.8	chr10	86756682	86756718	(47040704)	+	(AGG)n	Simple_repeat	1	37	(0)	500083
13	17.6	2.4	4.7	chr10	87659773	87659814	(46137608)	+	GA-rich	Low_complexity	1	43	(0)	501619
28	0.0	0.0	0.0	chr10	87659882	87659907	(46137515)	+	(GCT)n	Simple_repeat	1	26	(0)	501620
13	0.0	0.0	0.0	chr10	87659908	87659924	(46137498)	+	(CGC)n	Simple_repeat	1	17	(0)	501621
405	21.1	0.0	0.0	chr10	89861185	89861260	(43936162)	C	MER58C	DNA/hAT-Charlie	(22)	193	118	505079
135	16.6	0.8	1.2	chr10	89861261	89861512	(43935910)	+	(CTC)n	Simple_repeat	1	254	(0)	505080
530	19.5	3.0	6.6	chr10	89861516	89861652	(43935770)	C	MER58C	DNA/hAT-Charlie	(83)	132	1	505081
15	27.3	3.1	1.5	chr10	91798701	91798764	(41998658)	+	(GCCGCG)n	Simple_repeat	1	66	(0)	507864
369	15.0	1.6	0.0	chr10	93115926	93115985	(40681437)	+	LTR50	LTR/ERVL	21	81	(714)	510481
40	10.4	0.0	1.5	chr10	93116018	93116083	(40681339)	+	(AGGAGG)n	Simple_repeat	1	66	(0)	510482
504	23.5	19.7	1.1	chr10	93116084	93116529	(40680893)	+	LTR50	LTR/ERVL	152	789	(6)	510481
2408	8.5	0.7	0.3	chr10	94363546	94363850	(39433572)	+	AluSx	SINE/Alu	1	306	(6)	512846
13	21.8	2.7	0.0	chr10	95183860	95183896	(38613526)	+	(CGC)n	Simple_repeat	1	38	(0)	513856
12	24.2	3.5	3.4	chr10	95184025	95184081	(38613341)	+	(CAGGAG)n	Simple_repeat	1	59	(0)	513857
669	25.8	13.7	0.5	chr10	95248739	95249123	(38548299)	+	L2a	LINE/L2	2945	3388	(38)	513962
16	26.4	2.8	2.7	chr10	95291011	95291081	(38506341)	+	G-rich	Low_complexity	1	73	(0)	514030
15	4.8	0.0	0.0	chr10	96513616	96513649	(37283773)	+	(GCA)n	Simple_repeat	1	34	(0)	516113
556	21.9	1.5	0.0	chr10	97020276	97020403	(36777019)	+	L1ME3A	LINE/L1	6044	6173	(0)	517102
22	9.7	0.0	0.0	chr10	97082303	97082336	(36715086)	+	(GTG)n	Simple_repeat	1	34	(0)	517220
320	20.9	6.1	26.8	chr10	97082337	97082423	(36714999)	C	MIR	SINE/MIR	(9)	253	192	517221
27	18.2	0.0	1.7	chr10	97319464	97319521	(36477901)	+	GA-rich	Low_complexity	1	58	(0)	517719
24	20.4	0.0	1.7	chr10	97334505	97334562	(36462860)	+	(TCC)n	Simple_repeat	1	58	(0)	517742
15	22.1	2.0	2.0	chr10	97334636	97334684	(36462738)	+	(CGGAGC)n	Simple_repeat	1	50	(0)	517743
224	27.9	12.7	1.0	chr10	97687725	97687820	(36109602)	+	MIR	SINE/MIR	5	114	(154)	518502
14	18.2	0.0	0.0	chr10	97737144	97737174	(36060248)	+	(GCG)n	Simple_repeat	1	31	(0)	518629
12	20.1	7.5	1.8	chr10	99329299	99329351	(34468071)	+	(CTCCGG)n	Simple_repeat	1	57	(0)	521275
18	14.0	0.0	0.0	chr10	99329390	99329421	(34468001)	+	(GGC)n	Simple_repeat	1	32	(0)	521276
11	27.7	0.0	2.2	chr10	99329484	99329528	(34467894)	+	(CCCCGGC)n	Simple_repeat	1	45	(0)	521277
233	20.4	2.0	0.0	chr10	100046256	100046304	(33751118)	+	MER39B	LTR/ERV1	224	273	(380)	522606
1295	15.5	4.8	12.0	chr10	100046329	100046490	(33750932)	+	AluJo	SINE/Alu	5	136	(176)	522607
2312	9.3	0.3	0.3	chr10	100046491	100046790	(33750632)	+	AluSx	SINE/Alu	1	300	(12)	522608
50	22.4	2.2	5.4	chr10	100655870	100656049	(33141373)	+	(TCC)n	Simple_repeat	1	184	(0)	523737
12	4.7	0.0	7.7	chr10	101050378	101050403	(32747019)	+	(CGCC)n	Simple_repeat	1	26	(0)	524384
12	15.3	5.3	2.5	chr10	101695111	101695148	(32102274)	+	(GCCCGA)n	Simple_repeat	1	40	(0)	525478
14	22.6	0.0	0.0	chr10	101779876	101779911	(32017511)	+	(ATGC)n	Simple_repeat	1	36	(0)	525668
12	15.8	0.0	11.3	chr10	102421525	102421577	(31375845)	+	(GCCCC)n	Simple_repeat	1	53	(0)	526882
12	11.5	3.3	3.2	chr10	102450877	102450906	(31346516)	+	(GCGGC)n	Simple_repeat	1	31	(0)	526950
20	6.7	0.0	3.0	chr10	102714290	102714322	(31083100)	+	(CCT)n	Simple_repeat	1	33	(0)	527438
36	20.6	3.5	3.4	chr10	102743955	102744068	(31053354)	+	GA-rich	Low_complexity	1	118	(0)	527500
19	3.3	3.0	2.9	chr10	103277375	103277407	(30520015)	+	(CCTCGG)n	Simple_repeat	1	34	(0)	528586
12	25.1	4.3	0.0	chr10	103277411	103277457	(30519965)	+	(GCCGGCG)n	Simple_repeat	1	49	(0)	528587
14	18.2	0.0	0.0	chr10	103451607	103451637	(30345785)	+	GA-rich	Low_complexity	1	31	(0)	528984
38	0.0	0.0	0.0	chr10	103451643	103451677	(30345745)	+	(AGG)n	Simple_repeat	1	35	(0)	528985
24	12.8	5.9	0.0	chr10	103650162	103650212	(30147210)	+	(AGC)n	Simple_repeat	1	54	(0)	529359
215	27.9	2.9	2.9	chr10	103650318	103650387	(30147035)	+	MIR3	SINE/MIR	63	132	(76)	529360
2094	10.6	0.7	0.0	chr10	103738792	103739064	(30058358)	C	AluSp	SINE/Alu	(10)	303	29	529540
14	20.0	2.0	5.8	chr10	104639608	104639658	(29157764)	+	(CCT)n	Simple_repeat	1	52	(0)	531035
237	28.4	2.8	0.5	chr10	104824612	104824692	(28972730)	C	L2a	LINE/L2	(39)	3387	3281	531350
465	20.1	3.9	2.8	chr10	110497263	110497403	(23300019)	C	L1MC5	LINE/L1	(14)	9290	9163	539646
24	9.6	0.0	6.0	chr10	110919593	110919642	(22877780)	+	GA-rich	Low_complexity	1	50	(0)	540373
497	24.1	31.4	4.1	chr10	118020415	118020809	(15776613)	+	LTR33	LTR/ERVL	11	515	(0)	551449
12	24.2	3.5	3.4	chr10	118046682	118046695	(15750727)	+	(CTCCCT)n	Simple_repeat	1	57	(0)	551476
17	11.8	2.4	4.8	chr10	118046696	118046736	(15750686)	+	(CCT)n	Simple_repeat	1	42	(0)	551477
15	0.0	0.0	0.0	chr10	119028767	119028783	(14768639)	+	(AC)n	Simple_repeat	1	17	(0)	553068
16	24.1	1.8	3.5	chr10	119029967	119030023	(14767399)	+	(GCG)n	Simple_repeat	1	58	(0)	553071
16	23.3	0.0	0.0	chr10	119030023	119030062	(14767360)	+	(CTC)n	Simple_repeat	1	40	(0)	553072
21	12.1	0.0	0.0	chr10	119030110	119030145	(14767277)	+	(CGA)n	Simple_repeat	1	36	(0)	553073
25	11.5	2.0	2.0	chr10	119596497	119596545	(14200877)	+	G-rich	Low_complexity	1	50	(0)	554191
18	7.6	0.0	0.0	chr10	119596640	119596667	(14200755)	+	(AGG)n	Simple_repeat	1	28	(0)	554192
16	13.3	2.1	6.2	chr10	119651217	119651263	(14146159)	+	(CCGCGC)n	Simple_repeat	1	48	(0)	554324
19	10.0	0.0	0.0	chr10	119818781	119818812	(13978610)	+	(GACG)n	Simple_repeat	1	32	(0)	554648
12	25.5	0.0	0.0	chr10	123137015	123137051	(10660371)	+	(TGTC)n	Simple_repeat	1	37	(0)	559852
253	26.4	8.9	1.4	chr10	123145264	123145336	(10652086)	+	L2b	LINE/L2	3294	3372	(3)	559857
176	22.2	3.8	1.5	chr10	123972200	123972704	(9824718)	+	GA-rich	Low_complexity	1	524	(0)	561180
15	17.2	4.0	3.9	chr10	124021020	124021069	(9776353)	+	(GGAGGCA)n	Simple_repeat	1	52	(0)	561248
589	26.0	10.9	5.4	chr10	124238776	124239088	(9558334)	C	L1ME3F	LINE/L1	(347)	5896	5550	561558
66	1.6	0.0	0.0	chr10	124497234	124497297	(9300125)	+	(CCCATCCTC)n	Simple_repeat	1	64	(0)	562037
17	13.8	5.0	0.0	chr10	124791785	124791824	(9005598)	+	(ACCGCC)n	Simple_repeat	1	42	(0)	562470
240	32.2	2.0	3.3	chr10	126236293	126236443	(7560979)	C	L2	LINE/L2	(856)	2563	2415	564590
614	24.4	4.8	2.4	chr10	126236876	126237039	(7560383)	+	Zaphod3	DNA/hAT-Tip100	14	181	(2442)	564591
17	22.4	0.0	5.3	chr10	128047415	128047485	(5749937)	+	(GCT)n	Simple_repeat	1	67	(0)	566959
39	4.6	0.0	0.0	chr10	129949992	129950036	(3847386)	+	(AGGAGGG)n	Simple_repeat	1	45	(0)	568916
13	18.6	2.6	0.0	chr10	129950037	129950070	(3847352)	+	G-rich	Low_complexity	4	38	(0)	568917
12	23.2	0.0	4.5	chr10	131311212	131311255	(2486167)	+	G-rich	Low_complexity	1	44	(0)	570426
265	31.9	8.9	5.3	chr10	132237248	132237399	(1560023)	+	MIRc	SINE/MIR	65	222	(46)	571443
454	25.6	14.5	1.6	chr10	132536528	132536773	(1260649)	+	MER33	DNA/hAT-Charlie	15	297	(27)	571753
11	18.8	4.3	4.2	chr10	133230787	133230832	(566590)	+	(CGCGCC)n	Simple_repeat	1	48	(0)	572291
402	24.5	3.6	0.9	chr11	267122	267228	(134819394)	C	L2a	LINE/L2	(2)	3424	3315	573177
1613	26.8	10.6	2.2	chr11	469593	470578	(134616044)	+	L1MC3	LINE/L1	6558	7751	(131)	573426
13	19.0	3.8	5.5	chr11	536088	536140	(134550482)	+	(CAC)n	Simple_repeat	1	55	(0)	573534
69	13.2	2.1	2.8	chr11	555141	555280	(134531342)	+	G-rich	Low_complexity	1	143	(0)	573557
12	25.2	5.2	1.6	chr11	555572	555629	(134530993)	+	G-rich	Low_complexity	1	61	(0)	573558
1074	26.4	7.4	3.5	chr11	742841	743089	(134343533)	C	L1M5	LINE/L1	(357)	5822	5563	573873
277	37.3	4.7	0.0	chr11	1694390	1694531	(133392091)	C	MIRb	SINE/MIR	(66)	202	54	574943
257	27.6	3.8	3.3	chr11	1779923	1780045	(133306577)	C	L2a	LINE/L2	(58)	3368	3226	575076
210	35.0	2.5	6.5	chr11	1873308	1873474	(133213148)	+	L2c	LINE/L2	3160	3347	(40)	575200
28	3.3	0.0	0.0	chr11	2137217	2137247	(132949375)	+	(AGG)n	Simple_repeat	1	31	(0)	575472
13	19.4	0.0	8.9	chr11	2137362	2137417	(132949205)	+	(CCCTCT)n	Simple_repeat	1	56	(0)	575473
13	25.9	3.4	3.3	chr11	2270169	2270228	(132816394)	+	(CGC)n	Simple_repeat	1	60	(0)	575608
133	17.6	2.3	5.3	chr11	2306721	2307073	(132779549)	+	GA-rich	Low_complexity	1	361	(0)	575657
85	13.1	3.6	3.9	chr11	2863535	2863546	(132223076)	+	A-rich	Low_complexity	1	13	(0)	576227
1645	17.7	7.1	1.7	chr11	2863547	2863847	(132222775)	+	AluJb	SINE/Alu	2	312	(0)	576228
133	17.9	0.0	0.0	chr11	2884831	2885073	(132201549)	+	G-rich	Low_complexity	1	243	(0)	576272
11	11.1	6.9	0.0	chr11	2885145	2885173	(132201449)	+	(GACCGC)n	Simple_repeat	1	31	(0)	576273
19	11.2	5.8	3.6	chr11	2885520	2885571	(132201051)	+	GA-rich	Low_complexity	1	55	(0)	576274
35	17.9	3.9	3.8	chr11	2892561	2892662	(132193960)	+	(CCT)n	Simple_repeat	1	106	(0)	576289
14	23.9	0.0	7.9	chr11	3165324	3165386	(131921236)	+	GA-rich	Low_complexity	1	63	(0)	576656
12	30.9	0.0	3.4	chr11	3808543	3808601	(131278021)	+	(CCGCCC)n	Simple_repeat	1	59	(0)	577751
18	3.7	3.6	0.0	chr11	3855884	3855911	(131230711)	+	(TCTCT)n	Simple_repeat	1	29	(0)	577861
21	17.2	3.1	4.5	chr11	4393705	4393768	(130692854)	+	GA-rich	Low_complexity	1	66	(0)	578776
449	26.1	0.0	0.9	chr11	8251199	8251314	(126835308)	C	MIR3	SINE/MIR	(70)	138	24	583730
190	26.2	4.7	0.0	chr11	8356754	8356814	(126729808)	C	MamRTE1	LINE/RTE-BovB	(1731)	2081	2018	583885
33	5.2	0.0	0.0	chr11	8964364	8964403	(126122219)	+	(GGCTCA)n	Simple_repeat	1	40	(0)	584803
14	22.7	3.8	1.8	chr11	10450882	10450934	(124635688)	+	(CCCGGC)n	Simple_repeat	1	55	(0)	587572
49	0.0	0.0	0.0	chr11	12294798	12294841	(122791781)	+	(CTC)n	Simple_repeat	1	44	(0)	590569
15	18.1	0.0	0.0	chr11	13009382	13009414	(122077208)	+	(CGCAGC)n	Simple_repeat	1	33	(0)	591659
18	20.3	0.0	5.4	chr11	13009690	13009745	(122076877)	+	(CGG)n	Simple_repeat	1	56	(0)	591660
16	8.5	0.0	0.0	chr11	13009782	13009806	(122076816)	+	(ACG)n	Simple_repeat	1	25	(0)	591661
14	24.0	0.0	0.0	chr11	14891684	14891722	(120194900)	+	(GGAGCA)n	Simple_repeat	1	39	(0)	594637
20	20.5	1.3	6.5	chr11	16606964	16607004	(118479618)	+	(CTCCCC)n	Simple_repeat	1	75	(0)	597234
16	9.8	6.1	0.0	chr11	16607005	16607037	(118479585)	+	(CCT)n	Simple_repeat	1	35	(0)	597235
13	15.0	2.4	4.8	chr11	16607057	16607097	(118479525)	+	(CGCCCGG)n	Simple_repeat	1	42	(0)	597236
13	30.3	4.0	1.3	chr11	16607821	16607894	(118478728)	+	(CAGG)n	Simple_repeat	1	77	(0)	597238
25	19.1	7.1	1.1	chr11	17734866	17734950	(117351672)	+	(GCCTC)n	Simple_repeat	1	91	(0)	599229
359	24.7	3.3	6.4	chr11	17738913	17739068	(117347554)	C	MIR3	SINE/MIR	(54)	154	4	599235
15	11.7	0.0	3.3	chr11	18105972	18106001	(116980621)	+	(CTC)n	Simple_repeat	1	30	(0)	599909
1134	18.8	3.3	0.5	chr11	19671636	19671844	(115414778)	C	MER58C	DNA/hAT-Charlie	(0)	215	1	602639
5522	19.5	5.0	2.6	chr11	20131946	20133244	(114953378)	+	L1M3f	LINE/L1	1238	2542	(5023)	603401
356	25.2	3.9	2.3	chr11	20165106	20165237	(114921385)	+	MIR3	SINE/MIR	53	193	(15)	603455
13	20.6	2.4	2.4	chr11	20363824	20363864	(114722758)	+	(GCG)n	Simple_repeat	1	42	(0)	603807
200	25.6	10.9	0.0	chr11	22341965	22342046	(112744576)	+	MIR	SINE/MIR	109	200	(62)	606788
13289	22.3	3.7	1.7	chr11	25347596	25351953	(109734669)	C	L1PA15	LINE/L1	(3161)	4980	569	610938
23	21.9	1.5	1.5	chr11	30586282	30586346	(104500276)	+	(GAGC)n	Simple_repeat	1	66	(0)	618704
17	26.8	3.8	2.4	chr11	34052227	34052305	(101034317)	+	(GCGCCC)n	Simple_repeat	1	82	(0)	624603
27	15.1	0.0	6.0	chr11	35618295	35618361	(99468261)	+	G-rich	Low_complexity	1	67	(0)	627049
15	16.1	1.7	8.5	chr11	35618780	35618837	(99467785)	+	(GCGCCC)n	Simple_repeat	1	59	(0)	627052
60	11.8	0.9	1.9	chr11	36376295	36376399	(98710223)	+	(GGA)n	Simple_repeat	1	106	(0)	628355
18	10.7	4.8	2.3	chr11	36376494	36376535	(98710087)	+	GA-rich	Low_complexity	1	44	(0)	628356
15	4.7	0.0	0.0	chr11	43358854	43358875	(91727747)	+	(CTC)n	Simple_repeat	1	22	(0)	638336
36	16.4	1.1	4.4	chr11	43547957	43548045	(91538577)	+	G-rich	Low_complexity	1	90	(0)	638644
202	30.2	13.1	1.6	chr11	44840129	44840249	(90246373)	+	MIRb	SINE/MIR	95	231	(37)	640946
248	25.3	13.3	3.2	chr11	44944287	44944380	(90142242)	+	L2a	LINE/L2	3322	3426	(0)	641165
524	28.8	7.9	2.9	chr11	44944618	44944821	(90141801)	+	MIRb	SINE/MIR	45	259	(9)	641166
2429	9.8	0.0	0.9	chr11	44963667	44963981	(90122641)	C	AluSx1	SINE/Alu	(0)	312	1	641207
411	33.1	0.0	6.9	chr11	44963982	44964119	(90122503)	C	MIR3	SINE/MIR	(65)	143	15	641206
19	14.0	7.3	4.1	chr11	44964120	44964187	(90122435)	+	(CTCCTCC)n	Simple_repeat	1	73	(0)	641208
336	28.2	8.0	1.3	chr11	45091444	45091594	(89995028)	+	UCON107	DNA/hAT-Tag1	44	205	(0)	641483
247	31.3	5.7	1.2	chr11	45091718	45091853	(89994769)	C	L2b	LINE/L2	(225)	3162	3019	641484
12	16.3	2.8	2.7	chr11	45147136	45147171	(89939451)	+	(CTCCTCG)n	Simple_repeat	1	37	(0)	641574
13	13.5	6.1	0.0	chr11	45147283	45147315	(89939307)	+	(GACGCG)n	Simple_repeat	1	35	(0)	641575
14	30.9	1.5	1.5	chr11	45665098	45665162	(89421460)	+	(CCGCGC)n	Simple_repeat	1	66	(0)	642547
16	15.0	0.0	0.0	chr11	45665264	45665293	(89421329)	+	(GGC)n	Simple_repeat	1	30	(0)	642548
22	18.7	0.0	5.0	chr11	45665295	45665354	(89421268)	+	(TCC)n	Simple_repeat	1	60	(0)	642549
22	22.0	2.3	5.6	chr11	45665434	45665525	(89421097)	+	(GGACCCG)n	Simple_repeat	1	88	(0)	642550
844	19.5	0.6	3.0	chr11	45852779	45852947	(89233675)	C	MER5A1	DNA/hAT-Charlie	(1)	165	1	642915
1131	20.0	4.1	2.1	chr11	45853056	45853295	(89233327)	+	MIR	SINE/MIR	15	259	(3)	642916
491	27.7	2.2	5.3	chr11	46238837	46239023	(88847599)	C	MIR	SINE/MIR	(78)	184	4	643570
52	23.6	2.7	4.7	chr11	47376502	47376689	(87709933)	+	(TCC)n	Simple_repeat	1	193	(0)	645776
12	23.4	2.5	0.0	chr11	47469882	47469921	(87616701)	+	G-rich	Low_complexity	1	41	(0)	645986
12	19.3	0.0	5.1	chr11	47565815	47565853	(87520769)	+	(CCCCGT)n	Simple_repeat	1	39	(0)	646186
14	21.1	0.0	2.5	chr11	61509724	61509763	(73576859)	+	(GCCCCG)n	Simple_repeat	1	40	(0)	660336
317	25.1	7.0	3.9	chr11	61567148	61567288	(73519334)	+	MIRc	SINE/MIR	44	198	(10)	660427
2587	6.5	0.0	0.0	chr11	61637847	61638156	(73448466)	+	AluY	SINE/Alu	2	311	(0)	660568
192	27.9	4.5	0.0	chr11	61772064	61772126	(73314496)	C	MIR1_Amn	SINE/MIR	(115)	93	30	660821
11	17.2	3.8	7.3	chr11	62124145	62124197	(72962425)	+	G-rich	Low_complexity	1	55	(0)	661551
28	7.9	0.0	0.0	chr11	62726895	62726934	(72359688)	+	(CCT)n	Simple_repeat	1	40	(0)	662641
358	29.2	9.0	6.2	chr11	63511357	63511582	(71575040)	C	L2b	LINE/L2	(1)	3374	3142	663781
384	24.2	14.8	0.6	chr11	63511872	63512033	(71574589)	C	MIRb	SINE/MIR	(22)	246	58	663782
427	30.9	8.7	5.2	chr11	63599436	63599800	(71486822)	C	LTR84b	LTR/ERVL	(382)	379	1	663965
20	8.1	2.3	4.5	chr11	63671527	63671569	(71415053)	+	(CGAGG)n	Simple_repeat	1	44	(0)	664137
14	18.4	6.6	4.6	chr11	63762143	63762203	(71324419)	+	(TCC)n	Simple_repeat	1	65	(0)	664330
27	23.1	3.4	2.2	chr11	63764004	63764092	(71322530)	+	(CTC)n	Simple_repeat	1	92	(0)	664334
17	17.2	2.6	0.0	chr11	63764420	63764458	(71322164)	+	(CCT)n	Simple_repeat	1	40	(0)	664335
127	23.1	0.0	5.4	chr11	63771831	63772216	(71314406)	+	GA-rich	Low_complexity	1	386	(0)	664347
12	19.4	0.0	5.1	chr11	63999442	63999480	(71087142)	+	(GCCCC)n	Simple_repeat	1	39	(0)	664826
676	31.4	2.6	1.4	chr11	64024266	64024488	(71062134)	C	MIR	SINE/MIR	(2)	260	35	664869
47	22.2	3.7	4.1	chr11	64091009	64091171	(70995451)	+	GA-rich	Low_complexity	1	169	(0)	664987
247	30.8	1.9	0.0	chr11	64091280	64091383	(70995239)	C	MamRep564	Unknown	(186)	171	66	664988
16	11.1	0.0	3.1	chr11	64098036	64098067	(70988555)	+	(GTCCCT)n	Simple_repeat	1	32	(0)	665000
358	33.5	7.5	1.8	chr11	64098083	64098435	(70988187)	+	L2b	LINE/L2	2730	3107	(280)	665001
331	34.7	3.4	3.4	chr11	64225936	64226114	(70860508)	C	MIR3	SINE/MIR	(1)	207	29	665220
243	24.8	3.7	2.8	chr11	64559912	64560019	(70526603)	+	L2	LINE/L2	2095	2203	(1216)	665859
474	29.4	7.2	0.0	chr11	64752155	64752334	(70334288)	C	MER117	DNA/hAT-Charlie	(3)	194	1	666161
272	36.6	6.7	0.7	chr11	64863728	64863881	(70222741)	+	MIRb	SINE/MIR	24	187	(81)	666357
431	30.6	8.5	2.8	chr11	64997275	64997452	(70089170)	+	MIRb	SINE/MIR	16	204	(64)	666617
319	20.8	14.7	0.8	chr11	64997558	64997680	(70088942)	+	MIR	SINE/MIR	12	161	(107)	666618
15	14.7	0.0	0.0	chr11	65041184	65041213	(70045409)	+	(GCCCC)n	Simple_repeat	1	30	(0)	666738
217	30.8	6.2	4.8	chr11	65181117	65181242	(69905380)	C	MIR3	SINE/MIR	(3)	205	78	667022
29	21.7	1.1	5.3	chr11	65181833	65181926	(69904696)	+	GA-rich	Low_complexity	1	95	(0)	667023
224	31.9	8.7	0.6	chr11	65204010	65204167	(69882455)	+	L2c	LINE/L2	2664	2835	(584)	667060
2350	11.2	0.0	0.0	chr11	65213006	65213316	(69873306)	C	AluSq	SINE/Alu	(2)	311	1	667069
13	25.9	8.3	1.1	chr11	65558046	65558129	(69528493)	+	G-rich	Low_complexity	1	91	(0)	667764
15	14.0	8.2	4.5	chr11	65558202	65558262	(69528360)	+	(AGGCAGG)n	Simple_repeat	1	66	(0)	667765
180	32.8	4.5	0.0	chr11	65611736	65611799	(69474823)	C	L3	LINE/CR1	(1640)	2459	2393	667852
12	10.5	0.0	10.5	chr11	65890604	65890641	(69195981)	+	(GCCCC)n	Simple_repeat	1	38	(0)	668358
15	14.5	5.3	0.0	chr11	65890689	65890726	(69195896)	+	(CGGAGC)n	Simple_repeat	1	40	(0)	668359
13	15.9	2.6	5.0	chr11	65890858	65890896	(69195726)	+	(GCG)n	Simple_repeat	1	40	(0)	668360
22	24.2	1.9	6.5	chr11	65919124	65919228	(69167394)	+	G-rich	Low_complexity	1	107	(0)	668433
353	21.1	2.6	1.3	chr11	66958999	66959075	(68127547)	+	MIRb	SINE/MIR	88	165	(103)	670575
14	21.9	2.0	3.9	chr11	67302062	67302112	(67784510)	+	(CTGCC)n	Simple_repeat	1	52	(0)	671370
15	21.3	2.2	2.2	chr11	67302248	67302292	(67784330)	+	GA-rich	Low_complexity	1	46	(0)	671371
203	24.6	4.2	4.2	chr11	67391620	67391691	(67694931)	C	MIRc	SINE/MIR	(184)	84	13	671564
13	21.7	2.6	0.0	chr11	67391937	67391974	(67694648)	+	G-rich	Low_complexity	1	39	(0)	671565
401	28.0	11.8	6.3	chr11	67436475	67436928	(67649694)	+	L2a	LINE/L2	2873	3380	(7)	671640
181	21.4	8.7	9.7	chr11	67483484	67483576	(67603046)	+	AmnSINE1	SINE/5S-Deu-L2	33	124	(451)	671731
14	10.0	6.2	0.0	chr11	68461111	68461142	(66625480)	+	(CGCGG)n	Simple_repeat	1	34	(0)	673468
14	19.3	4.5	5.8	chr11	68461171	68461236	(66625386)	+	(CCCGC)n	Simple_repeat	1	69	(0)	673469
1848	13.4	2.8	22.0	chr11	69365361	69365897	(65720725)	C	Tigger2a	DNA/TcMar-Tigger	(3)	431	1	674967
1079	29.6	4.4	3.7	chr11	69365898	69366286	(65720336)	+	L1MEd	LINE/L1	3056	3444	(2875)	674959
185	17.9	7.1	0.0	chr11	69717304	69717342	(65369280)	C	MIR3	SINE/MIR	(48)	160	119	675570
84	7.3	6.0	7.4	chr11	69717385	69717602	(65369020)	+	(CTC)n	Simple_repeat	1	231	(0)	675571
19	26.8	3.9	1.2	chr11	69919659	69919736	(65166886)	+	(ACAC)n	Simple_repeat	1	81	(0)	675959
12	21.7	0.0	0.0	chr11	70398462	70398493	(64688129)	+	G-rich	Low_complexity	1	32	(0)	676805
11	27.7	0.0	0.0	chr11	70398499	70398537	(64688085)	+	(GGACCC)n	Simple_repeat	1	39	(0)	676806
266	31.9	4.2	0.9	chr11	70641479	70641592	(64445030)	+	MLT1J1	LTR/ERVL-MaLR	40	157	(287)	677141
12	19.4	1.5	10.4	chr11	71268517	71268582	(63818040)	+	(TAT)n	Simple_repeat	1	67	(0)	677973
40	3.6	0.0	6.2	chr11	71268740	71268804	(63817818)	+	(GGA)n	Simple_repeat	1	65	(0)	677974
2263	10.7	1.0	0.0	chr11	72324286	72324594	(62762028)	+	AluSz	SINE/Alu	1	312	(0)	679740
13	14.4	3.2	0.0	chr11	72590309	72590339	(62496283)	+	(GCGCC)n	Simple_repeat	1	32	(0)	680234
18	25.1	3.3	0.0	chr11	72674363	72674423	(62412199)	+	(CTGCCG)n	Simple_repeat	1	63	(0)	680388
337	31.4	8.1	1.2	chr11	72813752	72813912	(62272710)	+	L2c	LINE/L2	2975	3150	(237)	680655
70	0.0	0.0	0.0	chr11	73142812	73142871	(61943751)	+	(GT)n	Simple_repeat	1	60	(0)	681263
282	33.3	2.1	0.0	chr11	73965175	73965267	(61121355)	C	L3	LINE/CR1	(2)	4097	4003	683133
15	22.6	3.3	3.2	chr11	74493319	74493378	(60593244)	+	(GCACGC)n	Simple_repeat	1	62	(0)	684201
406	25.3	8.4	0.0	chr11	75553952	75554088	(59532534)	+	MIRb	SINE/MIR	104	265	(3)	686330
291	32.1	0.9	0.7	chr11	75554191	75554319	(59532303)	C	MIRc	SINE/MIR	(116)	152	23	686331
17	22.6	0.0	0.0	chr11	75554430	75554465	(59532157)	+	(CA)n	Simple_repeat	1	36	(0)	686332
15	4.9	0.0	4.3	chr11	75565609	75565631	(59520991)	+	(AC)n	Simple_repeat	1	23	(0)	686352
17	10.8	4.4	4.3	chr11	75583798	75583842	(59502780)	+	G-rich	Low_complexity	1	47	(0)	686391
266	22.3	17.5	2.1	chr11	76206122	76206217	(58880405)	C	MIRb	SINE/MIR	(71)	197	84	687527
382	26.3	4.0	3.2	chr11	76236788	76236977	(58849645)	C	MIR3	SINE/MIR	(22)	208	15	687583
567	31.4	4.0	1.0	chr11	76707109	76707301	(58379321)	+	MIRb	SINE/MIR	43	241	(27)	688517
16	13.1	0.0	5.4	chr11	76860956	76860992	(58225630)	+	(GGC)n	Simple_repeat	1	37	(0)	688821
12	17.6	4.0	5.8	chr11	77040151	77040200	(58046422)	+	(GCACGCT)n	Simple_repeat	1	52	(0)	689144
35	9.4	0.0	8.5	chr11	77474131	77474212	(57612410)	+	(CCCCTC)n	Simple_repeat	1	82	(0)	689967
15	13.7	3.1	0.0	chr11	77474212	77474243	(57612379)	+	(CGG)n	Simple_repeat	1	33	(0)	689968
13	12.6	8.6	0.0	chr11	77589618	77589652	(57496970)	+	(CCG)n	Simple_repeat	1	38	(0)	690202
12	18.1	4.2	1.3	chr11	77820097	77820135	(57266487)	+	GA-rich	Low_complexity	1	40	(0)	690658
16	17.0	0.0	0.0	chr11	93197794	93197826	(41888796)	+	(CGC)n	Simple_repeat	1	33	(0)	715244
92	15.6	0.0	2.3	chr11	93392911	93393084	(41693538)	+	(CCT)n	Simple_repeat	1	174	(0)	715530
1050	19.2	0.0	4.0	chr11	93393085	93393282	(41693340)	C	AluJb	SINE/Alu	(9)	303	114	715531
2087	8.2	0.0	12.9	chr11	93661104	93661445	(41425177)	C	AluJb	SINE/Alu	(14)	298	1	715957
13	23.4	0.0	2.4	chr11	93661502	93661543	(41425079)	+	G-rich	Low_complexity	1	42	(0)	715958
18	7.6	0.0	0.0	chr11	94543836	94543863	(40542759)	+	(CTCC)n	Simple_repeat	1	28	(0)	717311
15	20.5	0.0	2.4	chr11	94544397	94544437	(40542185)	+	(CAGCGG)n	Simple_repeat	1	41	(0)	717312
15	25.8	0.0	3.7	chr11	94544528	94544581	(40542041)	+	(CGG)n	Simple_repeat	1	54	(0)	717313
276	24.5	5.4	5.4	chr11	94639815	94639926	(40446696)	+	MLT1O	LTR/ERVL-MaLR	402	513	(29)	717456
16	7.8	3.5	3.3	chr11	94639927	94639948	(40446674)	+	(AC)n	Simple_repeat	1	23	(0)	717457
2049	14.0	1.8	2.3	chr11	94639949	94640291	(40446331)	+	MER61A	LTR/ERV1	1	341	(0)	717458
549	20.7	13.0	7.7	chr11	94640319	94640658	(40445964)	+	MLT1E1A	LTR/ERVL-MaLR	1	459	(194)	717459
1091	25.9	13.0	1.7	chr11	103609253	103609780	(31476842)	C	LTR50	LTR/ERVL	(119)	676	3	729685
9023	9.8	6.9	2.5	chr11	109105798	109106396	(25980226)	C	L1PB1	LINE/L1	(4934)	1929	1311	737874
3091	14.9	0.9	1.4	chr11	109106364	109106926	(25979696)	C	L1PB1	LINE/L1	(5668)	1195	636	737874
13	27.9	2.9	2.9	chr11	110429986	110430053	(24656569)	+	(CCGCCG)n	Simple_repeat	1	70	(0)	739820
11	16.5	7.8	3.6	chr11	111299729	111299779	(23786843)	+	(GGAGCGA)n	Simple_repeat	1	55	(0)	741167
12	0.0	0.0	5.0	chr11	111937630	111937649	(23148973)	+	(TCC)n	Simple_repeat	1	20	(0)	742243
336	31.2	7.7	0.6	chr11	112280294	112280451	(22806171)	C	L3	LINE/CR1	(163)	3936	3767	742878
567	31.8	7.3	8.7	chr11	112404079	112404255	(22682367)	C	L2b	LINE/L2	(4)	3371	3179	743096
1967	21.7	4.5	2.5	chr11	112404256	112404695	(22681927)	+	LTR16A	LTR/ERVL	3	451	(0)	743097
11	24.9	3.2	4.7	chr11	112963451	112963512	(22123110)	+	G-rich	Low_complexity	1	64	(0)	743910
14	22.5	0.0	2.3	chr11	112963495	112963537	(22123085)	+	(GGCGG)n	Simple_repeat	1	43	(0)	743911
33	11.6	1.8	0.0	chr11	114251741	114251796	(20834826)	+	(GGA)n	Simple_repeat	1	57	(0)	745971
201	26.1	4.4	0.0	chr11	114848290	114848354	(20238268)	+	L2b	LINE/L2	3307	3374	(1)	746806
55	23.8	5.1	4.0	chr11	117875103	117875337	(17211285)	+	(TG)n	Simple_repeat	1	247	(0)	751890
13	22.8	2.4	0.0	chr11	117876748	117876788	(17209834)	+	G-rich	Low_complexity	1	42	(0)	751891
16	17.9	8.8	4.0	chr11	117876847	117876914	(17209708)	+	(CT)n	Simple_repeat	1	74	(0)	751892
15	11.3	4.1	3.9	chr11	118152814	118152857	(16933765)	+	G-rich	Low_complexity	1	44	(0)	752413
19	26.2	2.1	5.2	chr11	118152876	118152946	(16933676)	+	(GGAGCA)n	Simple_repeat	1	96	(0)	752414
19	18.3	1.9	3.7	chr11	118152901	118152953	(16933669)	+	GA-rich	Low_complexity	1	54	(0)	752415
12	0.0	4.3	4.2	chr11	118152947	118152969	(16933653)	+	(GAGC)n	Simple_repeat	1	24	(0)	752416
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
180	28.4	2.2	12.0	chr11	118572963	118573062	(16513560)	C	Penelope1_Vert	LINE/Penelope	(139)	948	859	753162
8260	9.4	11.0	0.1	chr11	118688241	118689538	(16397084)	C	LTR12C	LTR/ERV1	(121)	1458	3	753355
14	17.6	0.0	6.7	chr11	118929552	118929596	(16157026)	+	(TCCCCC)n	Simple_repeat	1	45	(0)	753878
28	0.0	0.0	0.0	chr11	119018676	119018701	(16067921)	+	(GGA)n	Simple_repeat	1	26	(0)	754099
13	17.4	4.9	2.3	chr11	119168735	119168775	(15917847)	+	G-rich	Low_complexity	1	43	(0)	754377
343	34.6	0.8	1.6	chr11	119691646	119691774	(15394848)	+	MIRb	SINE/MIR	58	185	(83)	755303
15	18.6	0.0	8.6	chr11	119691822	119691879	(15394743)	+	(CCCTGCT)n	Simple_repeat	1	58	(0)	755304
16	3.5	6.9	0.0	chr11	119692322	119692350	(15394272)	+	(CTTCC)n	Simple_repeat	1	31	(0)	755305
11	6.1	14.7	0.0	chr11	119797285	119797318	(15289304)	+	(TGCACA)n	Simple_repeat	1	39	(0)	755483
240	35.3	2.3	0.0	chr11	120096683	120096767	(14989855)	+	MIRb	SINE/MIR	49	135	(133)	755958
37	7.2	3.5	0.0	chr11	120138150	120138207	(14948415)	+	(GAG)n	Simple_repeat	1	60	(0)	756022
56	25.3	2.7	4.4	chr11	120182721	120182939	(14903683)	+	GA-rich	Low_complexity	1	225	(0)	756096
20	25.3	0.0	0.0	chr11	120325238	120325300	(14761322)	+	(CCTCCG)n	Simple_repeat	1	63	(0)	756368
17	16.4	1.9	5.6	chr11	120512402	120512454	(14574168)	+	(GCCCCCT)n	Simple_repeat	1	54	(0)	756676
214	34.8	5.1	5.1	chr11	123188101	123188218	(11898404)	+	L2b	LINE/L2	3243	3360	(15)	761036
48	7.8	1.4	0.0	chr11	123188408	123188476	(11898146)	+	(TCC)n	Simple_repeat	1	70	(0)	761037
31	20.8	0.0	0.0	chr11	123741468	123741535	(11345087)	+	(CCCGG)n	Simple_repeat	1	68	(0)	762084
24	10.0	2.2	2.2	chr11	125164817	125164861	(9921761)	+	(GGC)n	Simple_repeat	1	46	(0)	764077
23	26.4	2.9	3.8	chr11	125164926	125165028	(9921594)	+	GA-rich	Low_complexity	1	106	(0)	764078
23	16.5	5.5	3.9	chr11	125165104	125165176	(9921446)	+	(GCC)n	Simple_repeat	1	77	(0)	764079
15	23.5	1.7	4.9	chr11	125495120	125495179	(9591443)	+	(CTC)n	Simple_repeat	1	61	(0)	764609
17	12.7	0.0	5.3	chr11	126062657	126062694	(9023928)	+	(GCG)n	Simple_repeat	1	38	(0)	765434
12	12.0	0.0	6.5	chr11	126062757	126062787	(9023835)	+	G-rich	Low_complexity	1	31	(0)	765435
12	27.7	3.5	1.7	chr11	126737201	126737258	(8349364)	+	G-rich	Low_complexity	1	60	(0)	766561
36	4.9	0.0	0.0	chr11	128521732	128521773	(6564849)	+	(TCC)n	Simple_repeat	1	42	(0)	769016
56	0.0	0.0	0.0	chr11	128784221	128784270	(6302352)	+	(CTC)n	Simple_repeat	1	50	(0)	769384
13	15.9	5.7	0.0	chr11	128784688	128784722	(6301900)	+	(CCCT)n	Simple_repeat	1	37	(0)	769385
861	23.4	8.4	1.9	chr11	128870570	128870882	(6215740)	+	LTR16B2	LTR/ERVL	122	456	(6)	769504
21	0.0	0.0	0.0	chr11	130427452	130427474	(4659148)	+	(T)n	Simple_repeat	1	23	(0)	771899
18	10.5	0.0	0.0	chr11	131375795	131375825	(3710797)	+	(ATGT)n	Simple_repeat	1	31	(0)	773207
29	23.1	3.8	5.8	chr11	131375889	131375894	(3710728)	+	(TCCTTC)n	Simple_repeat	1	8	(130)	773208
14	12.7	0.0	9.3	chr11	131375895	131375937	(3710685)	+	(TTCC)n	Simple_repeat	1	43	(0)	773209
29	23.1	3.8	5.8	chr11	131375938	131376021	(3710601)	+	(TCCTTC)n	Simple_repeat	9	138	(0)	773208
18	10.7	0.0	3.0	chr11	131890111	131890127	(3196495)	+	(CA)n	Simple_repeat	1	16	(0)	773962
63	4.6	0.0	0.0	chr11	131890128	131890194	(3196428)	+	(CT)n	Simple_repeat	1	67	(0)	773963
181	12.9	13.9	11.4	chr11	134868794	134868863	(217759)	+	MamRTE1	LINE/RTE-BovB	2370	2441	(1371)	777755
928	26.9	5.6	8.4	chr11	134868968	134869799	(216823)	C	L1MEc	LINE/L1	(1066)	5875	5111	777756
1071	13.6	1.3	0.0	chr12	1931506	1931660	(131343649)	+	AluJo	SINE/Alu	136	292	(20)	781450
136	23.5	0.9	0.9	chr12	2194096	2194426	(131080883)	+	(CCT)n	Simple_repeat	1	334	(0)	781841
14	10.8	3.1	3.0	chr12	2194568	2194599	(131080710)	+	(TCCT)n	Simple_repeat	1	33	(0)	781842
49	2.2	0.0	0.0	chr12	2848867	2848912	(130426397)	+	(AC)n	Simple_repeat	1	46	(0)	782766
15	10.8	3.3	0.0	chr12	4031250	4031279	(129244030)	+	(CCGC)n	Simple_repeat	1	31	(0)	784812
12	29.7	0.0	2.1	chr12	4031354	4031401	(129243908)	+	(GCGCT)n	Simple_repeat	1	48	(0)	784813
12	15.7	6.5	4.1	chr12	4031390	4031435	(129243874)	+	(GCGCC)n	Simple_repeat	1	49	(0)	784814
19	17.7	0.0	4.1	chr12	5429711	5429759	(127845550)	+	(TCCC)n	Simple_repeat	1	49	(0)	787023
15	5.6	0.0	0.0	chr12	6057609	6057627	(127217682)	+	(T)n	Simple_repeat	1	19	(0)	787932
12	13.7	0.0	7.9	chr12	6057722	6057759	(127217550)	+	(CCCGCC)n	Simple_repeat	1	38	(0)	787933
365	31.0	9.1	3.3	chr12	6339330	6339599	(126935710)	C	L2b	LINE/L2	(1)	3374	3088	788503
190	25.4	0.0	9.2	chr12	6339726	6339790	(126935519)	+	L2a	LINE/L2	3302	3360	(66)	788504
23	0.0	0.0	0.0	chr12	6339817	6339841	(126935468)	+	(TC)n	Simple_repeat	1	25	(0)	788505
41	0.0	0.0	0.0	chr12	6339842	6339876	(126935433)	+	(CA)n	Simple_repeat	1	35	(0)	788506
19	27.0	4.0	3.9	chr12	6342045	6342144	(126933165)	+	GA-rich	Low_complexity	1	104	(0)	788509
309	33.6	6.8	10.2	chr12	6342300	6342544	(126932765)	+	MIR	SINE/MIR	10	245	(17)	788510
14	27.8	3.6	0.0	chr12	6689100	6689155	(126586154)	+	(GGC)n	Simple_repeat	1	58	(0)	789180
14	13.2	4.3	6.1	chr12	6689168	6689214	(126586095)	+	GA-rich	Low_complexity	1	49	(0)	789181
23	4.8	6.7	2.1	chr12	6822707	6822751	(126452558)	+	(TCCC)n	Simple_repeat	1	48	(0)	789476
13	13.0	0.0	7.7	chr12	6867692	6867730	(126407579)	+	(GCCGG)n	Simple_repeat	1	39	(0)	789530
13	19.5	0.0	2.7	chr12	6868047	6868083	(126407226)	+	(CCTGCGC)n	Simple_repeat	1	37	(0)	789531
32	23.2	1.0	3.1	chr12	6914534	6914629	(126360680)	+	(CGC)n	Simple_repeat	1	97	(0)	789640
1537	20.4	7.8	0.9	chr12	9064280	9064729	(124210580)	+	MER52D	LTR/ERV1	5	488	(1635)	793384
14	22.7	2.0	3.9	chr12	11500684	11500733	(121774576)	+	(GCC)n	Simple_repeat	1	51	(0)	796566
23	11.5	0.0	0.0	chr12	12562926	12562963	(120712346)	+	(CCT)n	Simple_repeat	1	38	(0)	798344
13	20.4	0.0	7.7	chr12	12562962	12563013	(120712296)	+	(CCCGCG)n	Simple_repeat	1	52	(0)	798345
507	28.7	10.1	3.8	chr12	13256147	13256490	(120018819)	+	LTR88b	LTR/Gypsy?	35	402	(435)	799598
18	33.2	0.0	0.0	chr12	13541006	13541060	(119734249)	+	(AC)n	Simple_repeat	1	55	(0)	799984
13	14.1	7.3	2.3	chr12	13799690	13799730	(119475579)	+	GA-rich	Low_complexity	1	44	(0)	800327
14	9.1	0.0	0.0	chr12	16607161	16607184	(116668125)	+	(TCCT)n	Simple_repeat	1	24	(0)	804478
18	0.0	4.0	0.0	chr12	19130684	19130708	(114144601)	+	(AGG)n	Simple_repeat	1	26	(0)	807588
25	22.0	1.4	2.7	chr12	19439621	19439692	(113835617)	+	GA-rich	Low_complexity	1	73	(0)	808199
14	16.1	0.0	0.0	chr12	20369562	20369589	(112905720)	+	GA-rich	Low_complexity	1	28	(0)	809558
545	36.0	7.9	4.5	chr12	29153049	29153840	(104121469)	C	L2b	LINE/L2	(1)	3374	2558	821984
394	22.2	9.0	14.9	chr12	29153842	29154090	(104121219)	+	HAL1ME	LINE/L1	2227	2459	(6)	821985
13	25.4	0.0	2.3	chr12	32106755	32106798	(101168511)	+	(CCCCCCG)n	Simple_repeat	1	44	(0)	826842
13	20.6	4.9	4.7	chr12	32106869	32106959	(101168350)	+	(GCGAGCC)n	Simple_repeat	1	91	(0)	826843
12	24.0	6.1	0.0	chr12	45217156	45217204	(88058105)	+	GA-rich	Low_complexity	1	52	(0)	840514
35	22.2	7.7	0.0	chr12	46383575	46383704	(86891605)	+	GA-rich	Low_complexity	1	140	(0)	842184
37	8.0	0.0	0.0	chr12	47904085	47904137	(85371172)	+	(GAG)n	Simple_repeat	1	53	(0)	844399
2231	8.2	2.7	1.7	chr12	49225338	49225628	(84049681)	C	AluSg4	SINE/Alu	(15)	295	2	846723
202	33.0	3.3	5.4	chr12	49225758	49225850	(84049459)	+	L2b	LINE/L2	3284	3374	(1)	846722
12	16.1	0.0	7.5	chr12	49332967	49333006	(83942303)	+	G-rich	Low_complexity	1	40	(0)	846981
556	21.5	1.6	2.4	chr12	49894773	49894896	(83380413)	+	MIRb	SINE/MIR	118	240	(28)	847997
300	34.4	2.8	3.7	chr12	50620920	50621100	(82654209)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	849645
245	25.3	7.8	2.1	chr12	52391049	52391145	(80884164)	+	L2b	LINE/L2	3272	3374	(1)	852893
12	4.3	8.3	0.0	chr12	52965426	52965449	(80309860)	+	(GAG)n	Simple_repeat	1	26	(0)	853781
24	16.6	3.7	0.0	chr12	53499492	53499545	(79775764)	+	(CCT)n	Simple_repeat	1	56	(0)	854871
2044	11.6	2.7	12.3	chr12	56097320	56097693	(77177616)	+	MER1B	DNA/hAT-Charlie	3	339	(0)	858909
24	23.2	4.9	1.2	chr12	56258303	56258384	(77016925)	+	(CGG)n	Simple_repeat	1	86	(0)	859169
17	19.3	0.0	2.3	chr12	56488251	56488293	(76787016)	+	G-rich	Low_complexity	1	43	(0)	859634
19	0.0	0.0	0.0	chr12	57261758	57261778	(76013531)	+	(A)n	Simple_repeat	1	21	(0)	860915
354	27.2	12.6	7.2	chr12	57854052	57854245	(75421064)	C	L2b	LINE/L2	(0)	3387	3182	861929
1777	16.7	0.0	0.3	chr12	57854500	57854787	(75420522)	C	AluJo	SINE/Alu	(25)	287	1	861930
15	20.4	0.0	2.4	chr12	58920321	58920361	(74354948)	+	(CGCTCG)n	Simple_repeat	1	41	(0)	863390
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
12	16.1	5.7	0.0	chr12	63844435	63844469	(69430840)	+	(GCGCCC)n	Simple_repeat	1	37	(0)	870032
21	17.9	1.8	3.6	chr12	63844633	63844687	(69430622)	+	(TCC)n	Simple_repeat	1	56	(0)	870033
87	24.8	2.2	0.4	chr12	64172357	64172585	(69102724)	+	GA-rich	Low_complexity	1	234	(0)	870601
16	22.7	3.7	1.8	chr12	64781090	64781098	(68494211)	+	(GGC)n	Simple_repeat	1	53	(0)	871797
18	13.8	2.4	2.3	chr12	64781099	64781140	(68494169)	+	(GGCCGCG)n	Simple_repeat	1	43	(0)	871798
67	0.0	1.6	0.0	chr12	65824709	65824769	(67450540)	+	(TC)n	Simple_repeat	1	62	(0)	873413
24	25.5	3.7	2.7	chr12	65824931	65824969	(67450340)	+	(CCTCCT)n	Simple_repeat	1	39	(0)	873414
27	3.4	0.0	0.0	chr12	65824970	65824999	(67450310)	+	(ACCTCC)n	Simple_repeat	1	30	(0)	873415
24	25.5	3.7	2.7	chr12	65825000	65825008	(67450301)	+	(CCTCCT)n	Simple_repeat	4	20	(52)	873416
13	23.3	0.0	0.0	chr12	65825009	65825043	(67450266)	+	(CCG)n	Simple_repeat	1	35	(0)	873417
24	25.5	3.7	2.7	chr12	65825044	65825067	(67450242)	+	(CCTCCT)n	Simple_repeat	21	72	(0)	873416
15	23.2	1.9	3.6	chr12	65825209	65825262	(67450047)	+	(GGC)n	Simple_repeat	1	55	(0)	873418
13	16.8	0.0	5.4	chr12	68933059	68933095	(64342214)	+	(CCT)n	Simple_repeat	1	37	(0)	878376
39	30.6	0.7	2.1	chr12	72272612	72272754	(61002555)	+	GA-rich	Low_complexity	1	144	(0)	883613
23	30.3	4.6	0.9	chr12	75390913	75391020	(57884289)	+	(CCTCTCC)n	Simple_repeat	1	113	(0)	887474
12	13.9	0.0	0.0	chr12	76084480	76084503	(57190806)	+	(TCCC)n	Simple_repeat	1	24	(0)	888580
17	16.9	2.0	3.9	chr12	76084621	76084670	(57190639)	+	(GCGGCA)n	Simple_repeat	1	51	(0)	888581
12	7.8	3.2	6.2	chr12	76879075	76879105	(56396204)	+	(CCGCC)n	Simple_repeat	1	32	(0)	889997
110	14.7	4.5	4.3	chr12	77963809	77963823	(55311486)	+	(TTCTCC)n	Simple_repeat	1	135	(163)	891543
87	10.4	12.3	2.7	chr12	77963824	77964091	(55311218)	+	(TCCT)n	Simple_repeat	1	301	(0)	891544
672	26.2	2.7	1.1	chr12	80408408	80408592	(52866717)	C	MIR	SINE/MIR	(3)	259	72	894977
15	0.0	0.0	0.0	chr12	80408616	80408634	(52866675)	+	(TGC)n	Simple_repeat	1	19	(0)	894978
182	9.9	0.7	0.3	chr12	80408635	80408919	(52866390)	+	(TCC)n	Simple_repeat	1	287	(0)	894979
947	18.5	1.2	0.0	chr12	80408924	80409080	(52866229)	C	AluJo	SINE/Alu	(17)	295	137	894980
15	24.7	0.0	2.2	chr12	89352704	89352748	(43922561)	+	GA-rich	Low_complexity	1	45	(0)	906881
204	28.4	5.0	8.7	chr12	95943038	95943141	(37332168)	+	MIRb	SINE/MIR	71	170	(98)	918160
23	13.8	0.0	0.0	chr12	98457029	98457068	(34818241)	+	(CAG)n	Simple_repeat	1	40	(0)	922247
20	22.1	0.0	4.8	chr12	99984569	99984631	(33290678)	+	GA-rich	Low_complexity	1	63	(0)	924662
13	5.2	0.0	0.0	chr12	101877768	101877787	(31397522)	+	(CGG)n	Simple_repeat	1	20	(0)	928162
18	12.1	2.8	0.0	chr12	103746086	103746121	(29529188)	+	(CCTCCTC)n	Simple_repeat	1	37	(0)	931209
12	16.6	4.5	4.3	chr12	105107671	105107714	(28167595)	+	(GAGCCG)n	Simple_repeat	1	46	(0)	933857
2160	11.1	0.0	0.0	chr12	107225211	107225532	(26049777)	+	AluSc8	SINE/Alu	1	311	(0)	937667
704	15.4	0.0	0.0	chr12	107225533	107225636	(26049673)	+	AluJr	SINE/Alu	134	237	(75)	937668
24	7.5	2.2	4.3	chr12	107225727	107225772	(26049537)	+	(GGA)n	Simple_repeat	1	47	(0)	937669
20	15.8	5.9	1.9	chr12	108597822	108597872	(24677437)	+	(CA)n	Simple_repeat	1	54	(0)	940624
23	6.7	8.5	0.0	chr12	108598091	108598137	(24677172)	+	(CCTCCCT)n	Simple_repeat	1	51	(0)	940625
11	20.2	2.9	0.0	chr12	108598174	108598207	(24677102)	+	G-rich	Low_complexity	1	35	(0)	940626
22	18.9	4.3	2.7	chr12	109291552	109291621	(23983688)	+	(CTCTCC)n	Simple_repeat	1	73	(0)	942211
539	32.0	12.2	0.0	chr12	109598101	109598322	(23676987)	C	MIR	SINE/MIR	(0)	262	10	942828
39	0.0	2.3	2.2	chr12	111034713	111034756	(22240553)	+	(GGA)n	Simple_repeat	1	45	(0)	946177
36	20.4	4.5	2.6	chr12	111034783	111034894	(22240415)	+	(CCG)n	Simple_repeat	1	117	(0)	946178
745	29.9	5.3	0.9	chr12	111066722	111066954	(22208355)	+	MIRb	SINE/MIR	3	246	(22)	946236
261	18.5	0.6	4.9	chr12	111257182	111257813	(22017496)	+	(CTC)n	Simple_repeat	1	636	(0)	946633
210	38.5	1.3	0.0	chr12	111428801	111428878	(21846431)	C	MIR	SINE/MIR	(79)	183	105	947084
57	1.9	0.0	0.0	chr12	111429016	111429070	(21846239)	+	(GAG)n	Simple_repeat	1	55	(0)	947085
337	31.3	11.0	0.8	chr12	111429085	111429276	(21846033)	+	MIR	SINE/MIR	36	246	(22)	947086
20	16.4	2.4	0.0	chr12	113056663	113056704	(20218605)	+	(CTC)n	Simple_repeat	1	43	(0)	950693
21	22.4	1.8	0.0	chr12	113056881	113056937	(20218372)	+	(GGAGCC)n	Simple_repeat	1	58	(0)	950694
401	36.7	2.2	4.3	chr12	113196805	113196989	(20078320)	C	MIRb	SINE/MIR	(6)	262	82	951029
2170	11.6	0.7	0.0	chr12	113220259	113220552	(20054757)	C	AluSz	SINE/Alu	(15)	297	2	951097
21	5.2	4.4	4.3	chr12	113220553	113220594	(20054715)	+	(AAC)n	Simple_repeat	3	44	(0)	951098
27	15.2	0.0	0.0	chr12	113358637	113358687	(19916622)	+	(CTGGCG)n	Simple_repeat	1	51	(0)	951394
1271	27.2	9.8	1.2	chr12	113428624	113429044	(19846265)	C	MLT1K	LTR/ERVL-MaLR	(8)	587	127	951580
190	32.4	11.0	3.7	chr12	113666435	113666632	(19608677)	+	MIRc	SINE/MIR	22	235	(33)	952172
495	23.9	12.4	4.7	chr12	116910536	116910750	(16364559)	+	L2a	LINE/L2	3192	3425	(1)	959264
14	14.6	0.0	3.1	chr12	116910931	116910962	(16364347)	+	(GCG)n	Simple_repeat	1	32	(0)	959265
15	16.6	0.0	2.8	chr12	116911069	116911104	(16364205)	+	(GGCGCA)n	Simple_repeat	1	36	(0)	959266
205	31.3	5.8	2.7	chr12	117052870	117053053	(16222256)	+	L2c	LINE/L2	2787	2976	(443)	959455
286	26.5	9.3	0.0	chr12	117191851	117191948	(16083361)	+	MamRep605	LTR?	1	108	(741)	959748
335	30.1	13.3	8.5	chr12	117192072	117192434	(16082875)	+	L2c	LINE/L2	2998	3380	(7)	959749
15	16.1	0.0	0.0	chr12	117408545	117408573	(15866736)	+	(CTC)n	Simple_repeat	1	29	(0)	960285
1585	18.9	0.0	0.8	chr12	117418340	117418599	(15856710)	C	AluJb	SINE/Alu	(7)	305	48	960309
52	12.9	1.1	1.1	chr12	117968580	117968669	(15306640)	+	GA-rich	Low_complexity	1	91	(0)	961511
33	16.5	1.1	6.5	chr12	117968829	117968920	(15306389)	+	(TGC)n	Simple_repeat	1	93	(0)	961512
13	18.8	0.0	5.0	chr12	117968993	117969032	(15306277)	+	G-rich	Low_complexity	1	40	(0)	961513
14	25.6	1.7	3.3	chr12	118104038	118104096	(15171213)	+	(GCCGG)n	Simple_repeat	1	60	(0)	961850
17	3.3	6.1	2.9	chr12	120116651	120116683	(13158626)	+	(GGCG)n	Simple_repeat	1	35	(0)	966261
15	27.2	1.6	3.2	chr12	120116778	120116838	(13158471)	+	(CCT)n	Simple_repeat	1	62	(0)	966262
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
12	14.4	0.0	0.0	chr12	120619386	120619409	(12655900)	+	(AGG)n	Simple_repeat	1	24	(0)	967523
232	30.3	6.2	0.0	chr12	120619576	120619651	(12655658)	C	MIRb	SINE/MIR	(1)	267	187	967524
18	3.5	0.0	6.1	chr12	120640535	120640567	(12634742)	+	(GGGCG)n	Simple_repeat	1	33	(0)	967574
841	16.3	0.0	5.4	chr12	121668568	121668733	(11606576)	+	AluJo	SINE/Alu	137	293	(19)	969999
32	4.2	3.9	1.9	chr12	121803919	121803978	(11471331)	+	(GAG)n	Simple_repeat	1	61	(0)	970353
30	20.6	0.0	0.0	chr12	121804065	121804131	(11471178)	+	(GGCAGC)n	Simple_repeat	1	67	(0)	970354
463	33.8	2.9	3.9	chr12	121812309	121812514	(11462795)	+	MIRb	SINE/MIR	50	253	(15)	970364
24	12.2	0.0	0.0	chr12	121812752	121812788	(11462521)	+	(GT)n	Simple_repeat	1	37	(0)	970365
23	9.4	0.0	7.5	chr12	122226368	122226420	(11048889)	+	(GGCGG)n	Simple_repeat	1	53	(0)	971354
19	13.3	2.3	2.3	chr12	122966098	122966140	(10309169)	+	(GCTGCGG)n	Simple_repeat	1	44	(0)	973066
21	20.4	0.0	0.0	chr12	123436354	123436401	(9838908)	+	(CCT)n	Simple_repeat	1	48	(0)	974082
1151	17.9	0.4	3.0	chr12	123498205	123498438	(9776871)	C	AluJo	SINE/Alu	(0)	312	85	974242
15	32.2	0.0	1.6	chr12	123712361	123712423	(9562886)	+	(GCG)n	Simple_repeat	1	63	(0)	974781
15	20.2	0.0	8.3	chr12	123762140	123762199	(9513110)	+	G-rich	Low_complexity	1	60	(0)	974872
13	25.4	3.9	0.0	chr12	124532700	124532750	(8742559)	+	(CGGAGA)n	Simple_repeat	1	53	(0)	976226
1137	27.9	5.3	2.2	chr12	124533291	124533693	(8741616)	+	L2a	LINE/L2	3011	3426	(0)	976227
23	10.5	3.6	3.5	chr12	125186267	125186314	(8088995)	+	(GCCCCG)n	Simple_repeat	1	48	(0)	977731
44	2.1	2.1	0.0	chr12	125186315	125186362	(8088947)	+	(CTC)n	Simple_repeat	1	49	(0)	977732
21	9.4	0.0	0.0	chr12	125186369	125186402	(8088907)	+	(CGCT)n	Simple_repeat	1	34	(0)	977733
36	24.0	2.7	1.8	chr12	125186406	125186516	(8088793)	+	(GGC)n	Simple_repeat	1	114	(0)	977734
994	13.2	7.2	11.8	chr12	125330740	125330943	(7944366)	+	AluJr4	SINE/Alu	1	194	(118)	978051
239	27.8	6.5	0.9	chr12	131004468	131004583	(2270726)	+	MER5A	DNA/hAT-Charlie	1	123	(66)	987626
238	13.0	13.8	0.0	chr12	131229763	131229831	(2045478)	+	MER53	DNA/hAT	17	96	(97)	987881
503	23.1	3.8	3.1	chr12	131432348	131432477	(1842832)	C	MIR3	SINE/MIR	(73)	157	31	988112
78	19.5	2.4	0.0	chr12	131432516	131432682	(1842627)	+	GA-rich	Low_complexity	1	171	(0)	988113
382	30.3	3.6	0.0	chr12	131432747	131432878	(1842431)	+	MER58B	DNA/hAT-Charlie	202	338	(3)	988114
14	9.7	5.7	2.7	chr12	131860791	131860825	(1414484)	+	G-rich	Low_complexity	1	37	(0)	988709
18	9.7	3.0	0.0	chr12	131929829	131929861	(1345448)	+	(GCCCA)n	Simple_repeat	1	34	(0)	988831
249	23.5	5.5	1.2	chr12	132205113	132205198	(1070111)	C	MLT1D	LTR/ERVL-MaLR	(365)	140	51	989211
15	18.1	0.0	0.0	chr12	132275567	132275598	(999711)	+	(TCCC)n	Simple_repeat	1	32	(0)	989285
307	17.7	0.0	1.6	chr12	132275606	132275668	(999641)	+	MLT1K	LTR/ERVL-MaLR	525	586	(9)	989286
13	31.1	2.0	5.8	chr12	132389950	132389979	(885330)	+	(CCAGC)n	Simple_repeat	1	48	(55)	989399
18	9.8	0.0	2.9	chr12	132389980	132390018	(885291)	+	(CCCCGC)n	Simple_repeat	1	37	(0)	989400
13	31.1	2.0	5.8	chr12	132390019	132390050	(885259)	+	(CCAGC)n	Simple_repeat	49	103	(0)	989399
86	16.2	2.8	4.1	chr12	132437435	132437647	(837662)	+	GA-rich	Low_complexity	1	219	(0)	989456
11	24.2	5.5	1.7	chr12	132632539	132632593	(642716)	+	G-rich	Low_complexity	1	58	(0)	989693
11	14.5	7.5	2.3	chr12	132710536	132710575	(564734)	+	(CTCCGGC)n	Simple_repeat	1	43	(0)	989824
264	34.6	8.2	2.9	chr12	132761048	132761359	(513950)	+	L2	LINE/L2	2434	2763	(656)	989908
1303	21.3	15.1	0.8	chr13	21297000	21297397	(93066931)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	1	995869
22	17.2	3.8	0.0	chr13	21477020	21477072	(92887256)	+	A-rich	Low_complexity	1	55	(0)	996176
716	21.8	10.9	1.6	chr13	21477080	21477335	(92886993)	C	LTR50	LTR/ERVL	(506)	289	7	996175
424	22.0	6.0	2.1	chr13	21477344	21477487	(92886841)	C	L1M5	LINE/L1	(301)	5822	5673	996177
49	0.0	0.0	0.0	chr13	21669870	21669911	(92694417)	+	(GT)n	Simple_repeat	1	42	(0)	996498
35	2.8	0.0	0.0	chr13	22926403	22926439	(91437889)	+	(GGGGGT)n	Simple_repeat	1	37	(0)	998110
226	25.8	3.1	0.0	chr13	24040116	24040177	(90324151)	C	MLT1N2	LTR/ERVL-MaLR	(492)	70	7	999701
16	7.5	0.0	6.2	chr13	26679245	26679276	(87685052)	+	(CCT)n	Simple_repeat	1	32	(0)	1003623
32	10.4	0.0	0.0	chr13	27007004	27007056	(87357272)	+	(GCCGAGT)n	Simple_repeat	1	53	(0)	1004152
15	17.7	0.0	0.0	chr13	27793790	27793821	(86570507)	+	(GGC)n	Simple_repeat	1	32	(0)	1005516
36	4.5	2.2	0.0	chr13	27920071	27920116	(86444212)	+	(CCCGGCT)n	Simple_repeat	1	47	(0)	1005748
17	4.1	0.0	3.7	chr13	27920254	27920280	(86444048)	+	(GCC)n	Simple_repeat	1	27	(0)	1005749
187	20.8	1.7	1.4	chr13	27925244	27925664	(86438664)	+	(TCC)n	Simple_repeat	1	428	(0)	1005751
13	20.3	6.7	0.0	chr13	28495215	28495259	(85869069)	+	(TCC)n	Simple_repeat	1	48	(0)	1006835
15	15.7	0.0	5.1	chr13	28659275	28659313	(85705015)	+	(CGG)n	Simple_repeat	1	39	(0)	1007120
226	31.7	0.0	1.0	chr13	29943632	29943733	(84420595)	+	L1ME4a	LINE/L1	6024	6124	(0)	1008863
50	10.7	1.2	0.0	chr13	30422289	30422369	(83941959)	+	(GCCCA)n	Simple_repeat	1	82	(0)	1009665
22	21.6	3.4	0.0	chr13	30422375	30422433	(83941895)	+	(GGC)n	Simple_repeat	1	61	(0)	1009666
50	2.9	4.0	2.6	chr13	32031973	32032046	(82332282)	+	(TTTC)n	Simple_repeat	1	77	(0)	1012188
15	23.9	4.3	6.1	chr13	32587131	32587224	(81777104)	+	G-rich	Low_complexity	1	98	(0)	1013056
25	22.6	3.5	2.2	chr13	33350651	33350736	(81013592)	+	(CCTCC)n	Simple_repeat	1	89	(0)	1014177
18	0.0	0.0	0.0	chr13	36131374	36131396	(78232932)	+	(GGC)n	Simple_repeat	1	23	(0)	1018106
17	10.5	3.2	0.0	chr13	36131433	36131463	(78232865)	+	(CCT)n	Simple_repeat	1	32	(0)	1018107
183	30.4	1.8	10.4	chr13	39363349	39363404	(75000924)	C	MIR3	SINE/MIR	(2)	206	154	1022520
63	13.9	4.1	0.0	chr13	43879726	43879847	(70484481)	+	(CGAGG)n	Simple_repeat	1	127	(0)	1029464
11	33.5	0.0	4.2	chr13	44575830	44575901	(69788427)	+	(GGAGGC)n	Simple_repeat	1	72	(0)	1030511
13	13.2	0.0	0.0	chr13	44576031	44576055	(69788273)	+	(GCG)n	Simple_repeat	1	25	(0)	1030512
22	14.2	0.0	0.0	chr13	46553466	46553504	(67810824)	+	(CAC)n	Simple_repeat	1	39	(0)	1034100
16	20.8	2.2	2.1	chr13	46553513	46553558	(67810770)	+	(CGG)n	Simple_repeat	1	47	(0)	1034101
27	16.1	0.0	3.4	chr13	48303940	48303998	(66060330)	+	(GCC)n	Simple_repeat	1	59	(0)	1036634
6261	15.4	0.4	1.0	chr13	48542097	48543077	(65821251)	+	LTR1D	LTR/ERV1	1	975	(0)	1036980
21	21.6	3.8	3.6	chr13	50843398	50843479	(63520849)	+	(CGCCCG)n	Simple_repeat	1	82	(0)	1040728
151	1.0	4.4	5.0	chr13	51288444	51288671	(63075657)	+	(CTC)n	Simple_repeat	1	238	(0)	1041335
887	33.5	7.2	1.6	chr13	51675960	51676272	(62688056)	+	MER115	DNA/hAT-Tip100	1	332	(361)	1041957
16	26.2	1.8	1.8	chr13	52847304	52847359	(61516969)	+	(GCG)n	Simple_repeat	1	57	(0)	1043780
35	5.4	0.0	0.0	chr13	75480868	75480906	(38883422)	+	(CA)n	Simple_repeat	1	39	(0)	1073408
19	13.9	3.9	3.8	chr13	75482400	75482450	(38881878)	+	(TCCT)n	Simple_repeat	1	53	(0)	1073409
21	22.8	6.5	0.0	chr13	80340984	80341060	(34023268)	+	G-rich	Low_complexity	1	82	(0)	1080203
36	2.7	0.0	0.0	chr13	80341176	80341213	(34023115)	+	(GGA)n	Simple_repeat	1	38	(0)	1080204
13	13.1	0.0	0.0	chr13	87677539	87677563	(26686765)	+	(CGG)n	Simple_repeat	1	25	(0)	1089329
37	23.5	0.0	1.1	chr13	87677746	87677837	(26686491)	+	(CAG)n	Simple_repeat	1	92	(0)	1089330
2268	11.5	0.0	0.0	chr13	98322016	98322319	(16042009)	+	AluSq2	SINE/Alu	1	304	(9)	1104493
431	24.7	13.6	4.3	chr13	98322320	98322332	(16041996)	+	MIRb	SINE/MIR	224	234	(34)	1104492
291	25.6	14.7	10.3	chr13	99132084	99132363	(15231965)	+	L1MEj	LINE/L1	593	888	(1272)	1105756
610	31.0	8.1	2.8	chr13	99311079	99311403	(15052925)	C	L2a	LINE/L2	(0)	3426	3083	1106066
489	19.8	0.0	2.5	chr13	99758404	99758522	(14605806)	C	UCON47	Unknown	(0)	165	50	1106788
16	16.9	4.2	2.0	chr13	99896164	99896211	(14468117)	+	(CCGCCCG)n	Simple_repeat	1	50	(0)	1106993
98	30.4	1.4	4.9	chr13	99911008	99911507	(14452821)	+	(CTCTGA)n	Simple_repeat	1	507	(0)	1107021
256	31.9	2.1	6.0	chr13	99911834	99911933	(14452395)	+	MER131	DNA?	34	129	(86)	1107022
20	18.4	1.2	8.6	chr13	99981660	99981739	(14382589)	+	(CCTC)n	Simple_repeat	1	81	(0)	1107137
14	17.3	5.1	0.0	chr13	99981706	99981744	(14382584)	+	(CCCGC)n	Simple_repeat	1	41	(0)	1107138
35	13.9	1.6	0.0	chr13	99981789	99981851	(14382477)	+	(CTC)n	Simple_repeat	1	64	(0)	1107139
14	14.2	0.0	5.7	chr13	99981891	99981925	(14382403)	+	(GGC)n	Simple_repeat	1	35	(0)	1107140
35	6.8	0.0	0.0	chr13	99985449	99985494	(14378834)	+	(GCG)n	Simple_repeat	1	46	(0)	1107144
300	24.8	20.9	0.8	chr13	109213666	109213795	(5150533)	+	MER5A1	DNA/hAT-Charlie	4	166	(0)	1119755
16	5.8	11.1	0.0	chr13	109213873	109213908	(5150420)	+	(AGCAGG)n	Simple_repeat	1	40	(0)	1119756
112	12.7	0.5	1.6	chr13	110201195	110201417	(4162911)	+	(GGA)n	Simple_repeat	1	220	(0)	1121018
15	16.3	4.9	0.0	chr13	112104397	112104437	(2259891)	+	G-rich	Low_complexity	1	43	(0)	1123180
34	10.1	0.0	0.0	chr13	112165739	112165792	(2198536)	+	(CCT)n	Simple_repeat	1	54	(0)	1123236
17	12.7	0.0	0.0	chr13	112588396	112588421	(1775907)	+	(GT)n	Simple_repeat	1	26	(0)	1123662
567	26.5	18.0	3.5	chr13	112735466	112735837	(1628491)	C	Charlie15b	DNA/hAT-Charlie	(82)	979	542	1123883
15	26.3	5.5	3.1	chr13	113584448	113584538	(779790)	+	(CGCACG)n	Simple_repeat	1	96	(0)	1124892
16	21.4	2.3	0.0	chr13	113584581	113584623	(779705)	+	GA-rich	Low_complexity	1	44	(0)	1124893
446	28.3	8.1	0.0	chr13	113748484	113748705	(615623)	+	Tigger3	DNA/TcMar-Tigger	2756	2968	(61)	1124985
12	12.4	5.1	4.9	chr13	113951554	113951592	(412736)	+	(GGCCCA)n	Simple_repeat	1	41	(0)	1125157
1856	6.7	9.7	2.6	chr13	114280990	114281258	(83070)	+	AluSz	SINE/Alu	1	290	(22)	1125452
12	15.8	0.0	3.3	chr13	114281551	114281580	(82748)	+	G-rich	Low_complexity	1	30	(0)	1125453
12	27.6	6.2	0.0	chr13	114314573	114314637	(49691)	+	(GCCGCCC)n	Simple_repeat	1	69	(0)	1125515
14	25.2	1.8	3.6	chr14	21526253	21526307	(85517411)	+	(CGG)n	Simple_repeat	1	56	(0)	1129925
12	20.6	0.0	11.4	chr14	21526387	21526456	(85517262)	+	G-rich	Low_complexity	1	70	(0)	1129926
13	19.4	0.0	2.7	chr14	22982543	22982579	(84061139)	+	(CGCCCCC)n	Simple_repeat	1	37	(0)	1132084
13	15.8	4.2	6.0	chr14	23155361	23155408	(83888310)	+	(CCTT)n	Simple_repeat	1	50	(0)	1132376
13	23.2	7.5	1.4	chr14	23301599	23301665	(83742053)	+	(GGAAGGC)n	Simple_repeat	1	72	(0)	1132659
12	19.5	4.7	2.2	chr14	23539160	23539202	(83504516)	+	(GATGAA)n	Simple_repeat	1	45	(0)	1133006
14	30.3	3.2	4.2	chr14	24079582	24079674	(82964044)	+	GA-rich	Low_complexity	1	96	(0)	1133714
13	0.0	0.0	0.0	chr14	24079912	24079928	(82963790)	+	(TGG)n	Simple_repeat	1	17	(0)	1133715
24	18.7	0.0	0.0	chr14	24080025	24080068	(82963650)	+	(TC)n	Simple_repeat	1	44	(0)	1133716
311	32.4	11.9	3.7	chr14	24331551	24331765	(82711953)	C	MIR	SINE/MIR	(7)	255	21	1134086
2366	10.3	0.3	0.3	chr14	25260731	25261040	(81782678)	+	AluSp	SINE/Alu	1	310	(3)	1135332
1687	16.7	7.9	0.7	chr14	25261080	25261195	(81782523)	+	AluJo	SINE/Alu	1	116	(196)	1135333
35	0.0	0.0	0.0	chr14	25261196	25261225	(81782493)	+	(AC)n	Simple_repeat	1	30	(0)	1135334
1687	16.7	7.9	0.7	chr14	25261226	25261390	(81782328)	+	AluJo	SINE/Alu	117	304	(8)	1135333
25	27.1	2.3	1.1	chr14	28764445	28764463	(78279255)	+	GA-rich	Low_complexity	1	58	(31)	1139684
12	23.7	0.0	8.3	chr14	28764464	28764523	(78279195)	+	G-rich	Low_complexity	1	60	(0)	1139685
23	26.6	2.1	3.1	chr14	32939778	32939872	(74103846)	+	G-rich	Low_complexity	1	97	(0)	1145784
483	32.5	12.7	0.0	chr14	35347248	35347453	(71696265)	C	MIR	SINE/MIR	(12)	250	15	1149842
509	28.9	6.1	2.1	chr14	35347464	35347700	(71696018)	+	LTR33	LTR/ERVL	44	290	(225)	1149843
17	12.9	0.0	2.8	chr14	35347701	35347736	(71695982)	+	(GGTGCT)n	Simple_repeat	1	36	(0)	1149844
17	18.0	6.0	0.0	chr14	36056864	36056913	(70986805)	+	(AGAATGC)n	Simple_repeat	1	53	(0)	1151086
394	31.4	5.3	0.0	chr14	36057207	36057330	(70986388)	+	MIR3	SINE/MIR	30	160	(48)	1151087
46	17.4	2.7	2.6	chr14	47675308	47675418	(59368300)	+	GA-rich	Low_complexity	1	114	(0)	1165887
16	15.0	1.9	7.5	chr14	49634052	49634103	(57409615)	+	(CGG)n	Simple_repeat	1	53	(0)	1168309
14	24.7	0.0	0.0	chr14	52791516	52791554	(54252164)	+	(CACCGC)n	Simple_repeat	1	39	(0)	1173517
21	6.5	0.0	2.9	chr14	54567028	54567061	(52476657)	+	(GGA)n	Simple_repeat	1	34	(0)	1176155
27	14.2	6.5	0.0	chr14	60165237	60165298	(46878420)	+	(AGC)n	Simple_repeat	1	66	(0)	1184649
12	20.4	4.1	3.9	chr14	60721600	60721648	(46322070)	+	G-rich	Low_complexity	1	51	(0)	1185455
13	21.9	2.3	2.2	chr14	61695857	61695900	(45347818)	+	(GCCC)n	Simple_repeat	1	45	(0)	1186913
2461	5.4	0.3	0.3	chr14	64539682	64539978	(42503740)	C	AluSc	SINE/Alu	(12)	297	1	1191465
12325	20.8	5.1	4.9	chr14	68072669	68076015	(38967703)	C	L1PA15	LINE/L1	(2774)	5229	1598	1197184
5472	10.8	3.3	1.0	chr14	68219389	68220277	(38823441)	+	L1PB1	LINE/L1	1311	2220	(4643)	1197393
216	29.1	12.4	2.3	chr14	68263053	68263182	(38780536)	+	MIRb	SINE/MIR	72	216	(52)	1197451
21	16.4	3.5	3.3	chr14	69152986	69153043	(37890675)	+	(CCG)n	Simple_repeat	1	60	(0)	1198957
49	11.6	1.2	1.1	chr14	69842744	69842829	(37200889)	+	(GGAGGA)n	Simple_repeat	1	87	(0)	1200282
18	25.9	1.4	4.0	chr14	69859161	69859234	(37184484)	+	(GGTGGA)n	Simple_repeat	1	75	(0)	1200312
12	13.5	0.0	7.9	chr14	70641622	70641659	(36402059)	+	(CCCCTA)n	Simple_repeat	1	38	(0)	1201467
16	19.6	0.0	5.8	chr14	70641859	70641910	(36401808)	+	G-rich	Low_complexity	1	52	(0)	1201468
23	21.0	3.7	3.5	chr14	70641911	70641938	(36401780)	+	(GCGGAG)n	Simple_repeat	3	85	(0)	1201469
108	17.4	2.2	1.3	chr14	70701610	70701834	(36341884)	+	GA-rich	Low_complexity	1	230	(0)	1201586
120	26.7	6.7	0.8	chr14	70822242	70822735	(36220983)	+	(CT)n	Simple_repeat	1	527	(0)	1201805
187	22.2	0.0	0.0	chr14	70909794	70909829	(36133889)	+	L2a	LINE/L2	2501	2536	(883)	1201963
296	25.3	11.0	9.1	chr14	70909994	70910025	(36133693)	+	L2a	LINE/L2	2623	2654	(765)	1201963
191	4.1	0.0	0.5	chr14	70910026	70910230	(36133488)	+	(CTC)n	Simple_repeat	1	205	(0)	1201964
296	25.3	11.0	9.1	chr14	70910231	70910384	(36133334)	+	L2a	LINE/L2	2655	2813	(606)	1201963
975	29.7	10.9	2.5	chr14	70910385	70910826	(36132892)	+	L2a	LINE/L2	2929	3412	(14)	1201963
81	16.4	0.7	0.7	chr14	72600942	72601090	(34442628)	+	GA-rich	Low_complexity	1	150	(0)	1204525
218	25.3	12.0	2.1	chr14	72699770	72699866	(34343852)	C	L2	LINE/L2	(1328)	2091	1984	1204653
436	28.7	6.1	10.4	chr14	73712256	73712562	(33331156)	C	Charlie15b	DNA/hAT-Charlie	(551)	510	218	1206928
3849	28.2	1.6	1.1	chr14	73712619	73713668	(33330050)	C	MamGyp-int	LTR/Gypsy	(3972)	1131	76	1206930
17	19.8	0.0	2.3	chr14	74019488	74019530	(33024188)	+	(AAGGCA)n	Simple_repeat	1	43	(0)	1207613
13	9.7	5.7	2.7	chr14	74240773	74240807	(32802911)	+	(GCTCCTC)n	Simple_repeat	1	37	(0)	1208090
48	0.0	0.0	0.0	chr14	74432141	74432181	(32611537)	+	(GT)n	Simple_repeat	1	41	(0)	1208523
20	7.2	3.3	0.0	chr14	74432182	74432211	(32611507)	+	(AG)n	Simple_repeat	1	31	(0)	1208524
13	19.4	4.8	8.1	chr14	74882086	74882168	(32161550)	+	(GGCCG)n	Simple_repeat	1	87	(0)	1209340
12	22.6	3.1	6.1	chr14	75428647	75428710	(31615008)	+	(GGTGGA)n	Simple_repeat	1	66	(0)	1210445
494	27.3	2.8	1.4	chr14	75453591	75453731	(31589987)	C	MIRb	SINE/MIR	(75)	193	51	1210492
550	19.4	2.7	1.8	chr14	75631276	75631385	(31412333)	C	MER5A	DNA/hAT-Charlie	(0)	189	79	1210832
990	19.2	3.5	1.1	chr14	76720166	76720366	(30323352)	C	MER34	LTR/ERV1	(322)	263	11	1212835
16	27.2	4.5	5.1	chr14	76720585	76720696	(30323022)	+	G-rich	Low_complexity	1	117	(0)	1212836
12	12.0	0.0	6.5	chr14	76812884	76812914	(30230804)	+	(GCCCG)n	Simple_repeat	1	31	(0)	1212987
132	16.6	1.1	6.5	chr14	76922141	76922490	(30121228)	+	G-rich	Low_complexity	1	354	(0)	1213210
26	27.6	4.9	1.6	chr14	76922647	76922768	(30120950)	+	(TCTCTC)n	Simple_repeat	1	128	(0)	1213211
20	22.9	3.9	6.5	chr14	77098386	77098489	(29945229)	+	GA-rich	Low_complexity	1	108	(0)	1213611
7517	18.6	7.1	3.1	chr14	81169670	81171382	(25872336)	+	L1P4a	LINE/L1	23	1809	(4694)	1220221
13	14.7	3.3	0.0	chr14	89441087	89441116	(17602602)	+	(CTTCC)n	Simple_repeat	1	31	(0)	1232089
81	15.7	2.9	1.7	chr14	89566756	89566926	(17476792)	+	(CCT)n	Simple_repeat	1	176	(0)	1232316
13	19.6	2.2	4.3	chr14	90661531	90661575	(16382143)	+	G-rich	Low_complexity	1	46	(0)	1234262
737	21.5	12.4	0.5	chr14	91244258	91244415	(15799303)	C	MER112	DNA/hAT-Charlie	(81)	180	7	1235385
15	4.5	4.0	3.9	chr14	92323594	92323618	(14720100)	+	(GC)n	Simple_repeat	1	26	(0)	1237344
1570	22.2	2.9	4.3	chr14	92487688	92487965	(14555753)	C	MLT1C	LTR/ERVL-MaLR	(1)	466	185	1237647
55	4.6	2.0	5.8	chr14	92487966	92488066	(14555652)	+	(TCC)n	Simple_repeat	1	103	(0)	1237648
2256	12.8	0.0	0.0	chr14	92488075	92488370	(14555348)	C	AluSz	SINE/Alu	(15)	297	2	1237649
15	8.8	0.0	0.0	chr14	92932635	92932658	(14111060)	+	(GGA)n	Simple_repeat	1	24	(0)	1238531
235	37.0	2.0	3.9	chr14	93024342	93024445	(14019273)	+	MIRb	SINE/MIR	84	185	(83)	1238660
218	27.9	11.9	5.5	chr14	93110938	93111001	(13932717)	+	MIRb	SINE/MIR	99	172	(96)	1238810
54	0.0	0.0	4.8	chr14	93111002	93111063	(13932655)	+	(CCTCATC)n	Simple_repeat	1	62	(0)	1238811
218	28.1	10.5	4.8	chr14	93111064	93111114	(13932604)	+	MIRb	SINE/MIR	173	229	(39)	1238810
12	19.2	3.2	7.8	chr14	93430409	93430470	(13613248)	+	(CCTCCG)n	Simple_repeat	1	64	(0)	1239454
16	27.8	0.0	3.1	chr14	93788691	93788754	(13254964)	+	G-rich	Low_complexity	1	64	(0)	1240008
33	10.7	0.0	11.8	chr14	95686257	95686385	(11357333)	+	(TCCCCCC)n	Simple_repeat	1	113	(0)	1243517
273	23.3	1.1	6.5	chr14	95713757	95713848	(11329870)	+	L2b	LINE/L2	3073	3159	(216)	1243577
14	20.9	1.8	5.4	chr14	95877089	95877143	(11166575)	+	(CTCCGG)n	Simple_repeat	1	56	(0)	1243877
37	0.0	0.0	4.7	chr14	96100459	96100501	(10943217)	+	(CCCTCCT)n	Simple_repeat	1	43	(0)	1244242
48	15.6	1.1	0.0	chr14	99274710	99274797	(7768921)	+	(CCT)n	Simple_repeat	1	89	(0)	1249761
457	24.9	7.3	1.1	chr14	99394830	99395008	(7648710)	C	L3	LINE/CR1	(190)	3909	3719	1249999
27	18.8	0.0	3.1	chr14	99603435	99603498	(7440220)	+	(GCC)n	Simple_repeat	1	64	(0)	1250257
12	25.0	4.5	0.0	chr14	99876127	99876170	(7167548)	+	GA-rich	Low_complexity	1	46	(0)	1250774
2177	8.8	0.7	0.0	chr14	100284758	100285042	(6758676)	+	AluSx	SINE/Alu	1	287	(25)	1251597
14	26.3	0.0	2.1	chr14	100285045	100285091	(6758627)	+	G-rich	Low_complexity	1	47	(0)	1251598
15	24.6	3.4	1.6	chr14	100306149	100306207	(6737511)	+	(CCCGC)n	Simple_repeat	1	61	(0)	1251630
388	24.7	3.7	1.1	chr14	100522674	100522795	(6520923)	C	MIR	SINE/MIR	(107)	161	45	1252005
329	29.7	10.3	1.3	chr14	100586617	100586766	(6456952)	+	MIRb	SINE/MIR	87	251	(17)	1252097
15	27.1	2.3	0.0	chr14	100725941	100725984	(6317734)	+	(GT)n	Simple_repeat	1	45	(0)	1252314
85	25.2	3.2	3.1	chr14	100828321	100828629	(6215089)	+	(TCCTCCC)n	Simple_repeat	1	319	(0)	1252460
489	3.0	1.5	0.0	chr14	103096736	103096801	(3946917)	C	HERV17-int	LTR/ERV1	(0)	8626	8560	1256195
1672	22.7	7.5	5.8	chr14	103136806	103137010	(3906708)	C	MLT1D	LTR/ERVL-MaLR	(314)	191	1	1256253
14	18.8	3.2	4.2	chr14	103334689	103334755	(3708963)	+	G-rich	Low_complexity	1	66	(0)	1256589
18	0.0	0.0	3.9	chr14	103521142	103521167	(3522551)	+	(CCT)n	Simple_repeat	1	26	(0)	1256987
224	28.0	3.6	1.8	chr14	103530440	103530548	(3513170)	C	L2	LINE/L2	(646)	2773	2663	1256997
15	34.6	0.0	1.4	chr14	103629120	103629193	(3414525)	+	G-rich	Low_complexity	1	74	(0)	1257196
2461	7.8	0.0	0.0	chr14	103633062	103633356	(3410362)	C	AluSc8	SINE/Alu	(16)	295	1	1257202
194	18.9	17.2	3.6	chr14	103633610	103633664	(3410054)	+	L2a	LINE/L2	2791	2854	(565)	1257203
561	24.5	12.3	9.5	chr14	103633771	103633857	(3409861)	+	L2a	LINE/L2	3176	3263	(163)	1257203
1823	13.4	4.0	0.3	chr14	103910607	103910897	(3132821)	C	AluJo	SINE/Alu	(10)	302	1	1257772
22	16.2	2.0	2.0	chr14	104677815	104677864	(2365854)	+	(CCT)n	Simple_repeat	1	51	(0)	1258705
181	38.1	1.2	0.0	chr14	104695361	104695444	(2348274)	C	MIR3	SINE/MIR	(15)	193	109	1258728
23	19.9	0.0	3.3	chr14	104826530	104826590	(2217128)	+	(CCCGCGC)n	Simple_repeat	1	61	(0)	1258876
14	13.2	2.9	2.8	chr14	105398830	105398864	(1644854)	+	G-rich	Low_complexity	1	36	(0)	1259624
932	29.5	6.7	5.6	chr14	105414171	105414608	(1629110)	C	MLT1D	LTR/ERVL-MaLR	(49)	456	1	1259654
21	5.0	7.0	2.2	chr14	105415231	105415273	(1628445)	+	(CGCGGGG)n	Simple_repeat	1	46	(0)	1259656
41	21.6	0.8	5.3	chr15	26773072	26773201	(75217988)	+	G-rich	Low_complexity	1	131	(0)	1271880
260	29.1	26.8	0.9	chr15	26843090	26843314	(75147875)	+	LTR16C	LTR/ERVL	206	489	(0)	1271973
422	25.2	0.9	0.9	chr15	27250297	27250404	(74740785)	C	MER3	DNA/hAT-Charlie	(24)	185	78	1272419
2221	9.5	1.7	0.0	chr15	27250442	27250726	(74740463)	C	AluSz	SINE/Alu	(22)	290	1	1272420
12	16.7	5.9	0.0	chr15	29410577	29410610	(72580579)	+	(CCTG)n	Simple_repeat	1	36	(0)	1275410
1717	24.3	7.1	6.0	chr15	29410682	29410789	(72580400)	C	L1ME3F	LINE/L1	(370)	5873	5778	1275409
184	31.8	3.8	6.0	chr15	31025495	31025628	(70965561)	C	L2b	LINE/L2	(3)	3372	3242	1277991
41	2.6	0.0	0.0	chr15	31200637	31200676	(70790513)	+	(GT)n	Simple_repeat	1	40	(0)	1278266
15	4.8	0.0	0.0	chr15	31200740	31200761	(70790428)	+	(GAG)n	Simple_repeat	1	22	(0)	1278267
11	11.1	6.9	0.0	chr15	31393413	31393441	(70597748)	+	(CCCCGT)n	Simple_repeat	1	31	(0)	1278533
25	24.0	0.0	1.4	chr15	33310891	33310960	(68680229)	+	GA-rich	Low_complexity	1	70	(0)	1281194
419	14.3	0.0	0.0	chr15	34437880	34437942	(67553247)	+	L1PA7	LINE/L1	6081	6143	(11)	1282860
93	7.7	0.7	2.1	chr15	35019481	35019623	(66971566)	+	(TCC)n	Simple_repeat	1	144	(0)	1283799
267	30.5	4.7	0.0	chr15	35019676	35019757	(66971432)	C	MIRb	SINE/MIR	(161)	107	22	1283800
44	6.1	4.4	0.0	chr15	37099691	37099758	(64891431)	+	(TCC)n	Simple_repeat	1	71	(0)	1286508
24	19.1	0.0	0.0	chr15	37099805	37099848	(64891341)	+	A-rich	Low_complexity	1	44	(0)	1286509
37	0.0	0.0	0.0	chr15	40108220	40108251	(61882938)	+	(AC)n	Simple_repeat	1	32	(0)	1290688
17	22.9	4.3	2.7	chr15	41494396	41494465	(60496724)	+	G-rich	Low_complexity	1	73	(0)	1293496
26	26.8	2.5	4.1	chr15	41558999	41559118	(60432071)	+	(GCGGCG)n	Simple_repeat	1	123	(0)	1293644
17	17.8	1.7	6.8	chr15	41559164	41559221	(60431968)	+	(CCT)n	Simple_repeat	1	59	(0)	1293645
18	35.7	1.0	2.0	chr15	41559281	41559379	(60431810)	+	(GCC)n	Simple_repeat	1	100	(0)	1293646
19	15.8	0.0	4.3	chr15	41882218	41882263	(60108926)	+	(CCCCG)n	Simple_repeat	1	46	(0)	1294184
31	12.5	1.5	3.0	chr15	52528901	52528965	(49462224)	+	(GGCGG)n	Simple_repeat	1	66	(0)	1311446
32	22.2	0.0	0.0	chr15	52529060	52529132	(49462057)	+	(CGC)n	Simple_repeat	1	73	(0)	1311447
70	2.4	3.5	1.1	chr15	52679756	52679841	(49311348)	+	(CTC)n	Simple_repeat	1	89	(0)	1311701
16087	19.8	3.2	2.4	chr15	55524461	55527519	(46463670)	C	L1PA15	LINE/L1	(3139)	5002	1912	1315726
30	15.3	1.7	0.0	chr15	55993613	55993670	(45997519)	+	GA-rich	Low_complexity	1	59	(0)	1316534
21	12.6	0.0	0.0	chr15	56733492	56733527	(45257662)	+	(GAG)n	Simple_repeat	1	36	(0)	1317505
12	14.1	3.0	2.9	chr15	56733745	56733777	(45257412)	+	(GCCAGG)n	Simple_repeat	1	34	(0)	1317506
13	5.3	0.0	0.0	chr15	58772051	58772070	(43219119)	+	(AGG)n	Simple_repeat	1	20	(0)	1320769
14	18.4	2.7	0.0	chr15	62456333	62456369	(39534820)	+	(CAGCAG)n	Simple_repeat	1	38	(0)	1326940
538	26.7	1.2	7.3	chr15	63277932	63278109	(38713080)	+	Charlie4z	DNA/hAT-Charlie	1	167	(0)	1328276
436	21.4	5.2	11.8	chr15	63278121	63278306	(38712883)	+	MER5B	DNA/hAT-Charlie	2	174	(4)	1328277
11	21.5	4.4	2.1	chr15	64911857	64911901	(37079288)	+	G-rich	Low_complexity	1	47	(0)	1331492
17	24.9	2.0	0.0	chr15	65638801	65638850	(36352339)	+	G-rich	Low_complexity	1	51	(0)	1333046
846	11.7	5.5	4.3	chr15	65965405	65965424	(36025765)	C	L1MB3	LINE/L1	(7)	6176	6158	1333711
1592	18.0	11.3	1.4	chr15	65965425	65965571	(36025618)	+	MLT1A1	LTR/ERVL-MaLR	2	174	(234)	1333712
777	23.8	17.8	3.6	chr15	66634301	66634549	(35356640)	+	MER115	DNA/hAT-Tip100	397	688	(5)	1335131
226	29.1	1.2	4.8	chr15	66634556	66634638	(35356551)	+	MIRb	SINE/MIR	165	244	(24)	1335132
16	3.9	0.0	6.7	chr15	66634711	66634740	(35356449)	+	(GGA)n	Simple_repeat	1	30	(0)	1335133
188	17.1	0.0	0.0	chr15	66634856	66634890	(35356299)	C	L2a	LINE/L2	(257)	3169	3135	1335134
888	18.8	8.8	0.0	chr15	67091799	67092006	(34899183)	C	LTR33A_	LTR/ERVL	(0)	531	304	1336060
729	26.4	4.5	1.7	chr15	67092029	67092263	(34898926)	C	LTR33A_	LTR/ERVL	(289)	242	1	1336060
822	22.0	2.1	1.1	chr15	67092408	67092591	(34898598)	+	MER5A	DNA/hAT-Charlie	1	186	(3)	1336061
346	36.1	6.7	0.0	chr15	67863995	67864174	(34127015)	C	MIRc	SINE/MIR	(53)	215	23	1337258
14	25.1	2.1	0.0	chr15	68229352	68229398	(33761791)	+	(CGCCC)n	Simple_repeat	1	48	(0)	1337960
39	30.9	2.7	2.1	chr15	68229676	68229860	(33761329)	+	G-rich	Low_complexity	1	190	(0)	1337961
281	31.0	5.0	2.8	chr15	68256802	68256977	(33734212)	+	MER45C	DNA/hAT-Tip100	261	440	(513)	1338010
18	11.2	3.3	0.0	chr15	68695106	68695135	(33296054)	+	(TC)n	Simple_repeat	1	31	(0)	1338860
13	24.2	1.9	3.8	chr15	68700832	68700883	(33290306)	+	G-rich	Low_complexity	1	53	(0)	1338871
20	3.1	6.1	0.0	chr15	68818036	68818068	(33173121)	+	(AAAT)n	Simple_repeat	1	35	(0)	1339115
19	19.5	3.1	8.1	chr15	68818107	68818202	(33172987)	+	(CCGCGCC)n	Simple_repeat	1	99	(0)	1339116
381	29.7	11.7	4.8	chr15	69719870	69720035	(32271154)	C	MIRb	SINE/MIR	(56)	212	34	1340779
193	26.8	6.7	0.0	chr15	69949506	69949561	(32041628)	C	L3	LINE/CR1	(1101)	2998	2939	1341193
390	30.0	2.7	4.3	chr15	69949730	69949917	(32041272)	C	MER102a	DNA/hAT-Charlie	(83)	247	63	1341196
702	28.5	8.7	4.5	chr15	71145199	71145690	(30845499)	C	Tigger16a	DNA/TcMar-Tigger	(152)	805	291	1343282
29	20.1	6.2	1.9	chr15	71145813	71145909	(30845280)	+	GA-rich	Low_complexity	1	103	(0)	1343283
18	28.7	0.0	2.8	chr15	72230283	72230354	(29760835)	+	(CCCGCCG)n	Simple_repeat	1	69	(0)	1345107
32	23.8	0.0	7.2	chr15	72319477	72319601	(29671588)	+	G-rich	Low_complexity	1	125	(0)	1345246
31	24.4	2.6	6.4	chr15	72319943	72320095	(29671094)	+	G-rich	Low_complexity	1	157	(0)	1345247
21	19.5	3.3	1.6	chr15	72474519	72474578	(29516611)	+	(CGGAGC)n	Simple_repeat	1	62	(0)	1345547
25	27.0	1.0	4.0	chr15	72474642	72474752	(29516437)	+	(GGACGA)n	Simple_repeat	1	107	(0)	1345548
13	17.3	3.3	7.9	chr15	72474796	72474856	(29516333)	+	(GGCGGC)n	Simple_repeat	1	63	(0)	1345549
27	3.5	0.0	0.0	chr15	72474867	72474896	(29516293)	+	(CGG)n	Simple_repeat	1	30	(0)	1345550
322	24.3	6.4	1.0	chr15	72835419	72835522	(29155667)	C	MIRb	SINE/MIR	(157)	111	2	1346173
2149	13.6	5.2	1.1	chr15	72835832	72836196	(29154993)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1346174
25	21.0	0.0	1.6	chr15	73633270	73633331	(28357858)	+	G-rich	Low_complexity	1	62	(0)	1347427
319	30.4	7.1	4.6	chr15	73753801	73754138	(28237051)	C	L2c	LINE/L2	(1)	3374	3019	1347661
13	15.7	9.6	1.8	chr15	73775384	73775435	(28215754)	+	G-rich	Low_complexity	1	57	(0)	1347698
15	17.4	0.0	12.2	chr15	73775478	73775551	(28215638)	+	G-rich	Low_complexity	1	74	(0)	1347698
2241	8.4	0.0	0.7	chr15	73775569	73775890	(28215299)	+	AluSp	SINE/Alu	1	313	(0)	1347699
2034	15.5	1.0	0.0	chr15	73851300	73851595	(28139594)	C	AluJb	SINE/Alu	(8)	304	6	1347835
15	14.4	5.0	2.4	chr15	73927563	73927602	(28063587)	+	(GCC)n	Simple_repeat	1	42	(0)	1347952
13	13.1	0.0	0.0	chr15	74291623	74291647	(27699542)	+	(AGGC)n	Simple_repeat	1	25	(0)	1348595
230	28.8	5.1	1.8	chr15	74302849	74302961	(27688228)	+	MIR3	SINE/MIR	60	176	(32)	1348615
13	19.2	0.0	0.0	chr15	74433572	74433601	(27557588)	+	(ACAC)n	Simple_repeat	1	30	(0)	1348810
19	12.0	2.8	0.0	chr15	74433806	74433841	(27557348)	+	(CAG)n	Simple_repeat	1	37	(0)	1348811
12	10.3	6.1	2.9	chr15	74610266	74610298	(27380891)	+	(CCACC)n	Simple_repeat	1	35	(0)	1349179
2212	6.3	4.7	0.7	chr15	74759964	74760249	(27230940)	C	AluY	SINE/Alu	(13)	298	1	1349461
430	28.4	4.9	2.5	chr15	74760254	74760412	(27230777)	C	MLT1M	LTR/ERVL-MaLR	(402)	270	108	1349462
480	23.6	10.0	3.4	chr15	74760662	74760810	(27230379)	C	LTR88b	LTR/Gypsy?	(649)	188	29	1349463
16	26.4	5.6	0.0	chr15	74826536	74826607	(27164582)	+	G-rich	Low_complexity	1	76	(0)	1349591
15	23.0	0.0	0.0	chr15	74826648	74826688	(27164501)	+	(GTGCCCG)n	Simple_repeat	1	41	(0)	1349592
434	23.5	9.2	0.0	chr15	75653291	75653409	(26337780)	C	MER94	DNA/hAT-Blackjack	(1)	133	3	1351314
199	29.5	1.6	0.0	chr15	75653519	75653579	(26337610)	C	MIRb	SINE/MIR	(192)	76	15	1351315
288	20.8	2.9	2.3	chr15	75739347	75739434	(26251755)	C	MIR3	SINE/MIR	(55)	153	69	1351437
216	30.3	1.3	0.0	chr15	75842893	75842968	(26148221)	C	L2a	LINE/L2	(676)	2743	2667	1351618
19	13.2	0.0	6.4	chr15	76335895	76335943	(25655246)	+	A-rich	Low_complexity	1	45	(0)	1352419
25	27.4	0.0	2.4	chr15	76335943	76336024	(25655165)	+	GA-rich	Low_complexity	1	82	(0)	1352420
13	17.6	0.0	2.9	chr15	76338004	76338037	(25653152)	+	G-rich	Low_complexity	1	34	(0)	1352424
18	23.9	3.7	4.7	chr15	77541896	77541977	(24449212)	+	(TCC)n	Simple_repeat	1	85	(0)	1354237
23	26.5	1.3	1.3	chr15	77632810	77632887	(24358302)	+	(CCGCTC)n	Simple_repeat	1	79	(0)	1354379
22	20.6	6.9	2.1	chr15	77632902	77632988	(24358201)	+	(GAGC)n	Simple_repeat	1	93	(0)	1354380
17	3.3	9.7	0.0	chr15	77633008	77633038	(24358151)	+	(TGG)n	Simple_repeat	1	34	(0)	1354381
498	28.8	1.2	6.3	chr15	78340783	78340956	(23650233)	+	MIR3	SINE/MIR	15	179	(29)	1355681
3389	20.5	8.6	6.0	chr15	78405689	78407135	(23584054)	+	MER52A	LTR/ERV1	10	1733	(22)	1355818
18	8.3	4.8	4.5	chr15	82045086	82045127	(19946062)	+	(TCC)n	Simple_repeat	1	44	(0)	1362233
211	21.5	3.2	2.8	chr15	82058654	82059241	(19931948)	+	(CTC)n	Simple_repeat	1	607	(0)	1362268
2155	15.0	0.0	0.0	chr15	82700855	82701160	(19290029)	C	AluSz	SINE/Alu	(6)	306	1	1363296
14	14.0	4.9	2.3	chr15	82701410	82701450	(19289739)	+	A-rich	Low_complexity	1	43	(0)	1363297
16	17.4	4.3	2.0	chr15	84748212	84748258	(17242931)	+	G-rich	Low_complexity	1	49	(0)	1366585
180	32.4	5.2	10.5	chr15	85168688	85168849	(16822340)	+	MER5A	DNA/hAT-Charlie	19	171	(18)	1367351
184	34.2	8.8	0.0	chr15	85168824	85168896	(16822293)	C	MIR	SINE/MIR	(78)	184	105	1367352
21	21.9	1.7	9.4	chr15	88233692	88233806	(13757383)	+	(CTCC)n	Simple_repeat	1	117	(0)	1372021
26	18.4	0.0	0.0	chr15	88396417	88396467	(13594722)	+	(TCC)n	Simple_repeat	1	51	(0)	1372326
2284	8.7	0.0	1.6	chr15	88911441	88911752	(13079437)	+	AluY	SINE/Alu	1	307	(4)	1373235
306	22.2	16.8	0.0	chr15	89004065	89004163	(12987026)	+	MLT2C1	LTR/ERVL	396	514	(49)	1373435
29	13.2	7.5	2.3	chr15	89004576	89004655	(12986534)	+	(CTTCC)n	Simple_repeat	1	86	(0)	1373436
29	16.9	5.7	3.2	chr15	89004656	89004661	(12986528)	+	(TTCC)n	Simple_repeat	3	93	(0)	1373437
14	23.8	6.8	0.0	chr15	89004803	89004861	(12986328)	+	(AGGAGC)n	Simple_repeat	1	63	(0)	1373438
11	28.2	0.0	2.2	chr15	89334706	89334750	(12656439)	+	(CCCCCGG)n	Simple_repeat	1	45	(0)	1374040
669	0.0	0.0	0.0	chr15	89335073	89335145	(12656044)	+	tRNA-Arg-CGA_	tRNA	1	73	(3)	1374041
14	21.7	0.0	2.6	chr15	89395556	89395594	(12595595)	+	(TCC)n	Simple_repeat	1	39	(0)	1374136
20	5.4	4.7	4.4	chr15	89999907	89999953	(11991236)	+	(GGAAG)n	Simple_repeat	1	47	(0)	1375383
20	19.5	0.0	5.2	chr15	90181889	90181946	(11809243)	+	GA-rich	Low_complexity	1	58	(0)	1375837
18	16.3	10.0	1.3	chr15	90181947	90181957	(11809232)	+	(TGGAGGAGG)n	Simple_repeat	2	77	(0)	1375838
523	31.8	4.0	7.7	chr15	90870700	90870958	(11120231)	+	MIRb	SINE/MIR	3	251	(17)	1377285
12	21.1	6.2	5.9	chr15	90871296	90871375	(11119814)	+	G-rich	Low_complexity	1	85	(0)	1377286
5585	19.4	3.0	2.2	chr15	92204850	92205974	(9785215)	C	L1M1	LINE/L1	(6420)	1145	12	1379513
298	26.4	1.1	6.2	chr15	92655988	92656084	(9335105)	C	MIRb	SINE/MIR	(41)	227	136	1380170
347	33.3	12.9	2.1	chr15	93241982	93242580	(8748609)	C	L2a	LINE/L2	(217)	3158	2485	1381273
15	14.4	4.8	7.6	chr15	96331385	96331447	(5659742)	+	(CCGCCGG)n	Simple_repeat	1	66	(0)	1385728
40	8.1	1.5	1.5	chr15	96331535	96331601	(5659588)	+	(CTC)n	Simple_repeat	1	68	(0)	1385729
21	21.1	0.0	0.0	chr15	96331631	96331679	(5659510)	+	GA-rich	Low_complexity	1	49	(0)	1385730
19	15.5	1.4	9.7	chr15	96331743	96331813	(5659376)	+	(CTCCC)n	Simple_repeat	1	72	(0)	1385731
182	29.6	14.0	1.0	chr15	98419473	98419571	(3571618)	C	L2a	LINE/L2	(20)	3406	3293	1388611
49	15.2	3.0	1.0	chr15	98419572	98419671	(3571518)	+	GA-rich	Low_complexity	1	103	(0)	1388612
1172	19.1	0.0	5.2	chr15	98419760	98419990	(3571199)	+	AluJo	SINE/Alu	84	302	(10)	1388613
27	30.2	4.6	2.2	chr15	98688261	98688390	(3302799)	+	(TC)n	Simple_repeat	1	136	(0)	1389044
44	0.0	0.0	0.0	chr15	98688415	98688452	(3302737)	+	(TG)n	Simple_repeat	1	38	(0)	1389045
27	9.0	10.3	3.5	chr15	98845340	98845372	(3145817)	+	(TC)n	Simple_repeat	1	35	(0)	1389235
96	5.1	2.1	6.2	chr15	98845373	98845560	(3145629)	+	(CTC)n	Simple_repeat	1	192	(0)	1389236
13	15.4	5.6	0.0	chr15	99105697	99105732	(2885457)	+	(CCGCCG)n	Simple_repeat	1	38	(0)	1389634
375	31.9	4.4	1.6	chr15	101047557	101047859	(943330)	+	L1ME3G	LINE/L1	5359	5672	(452)	1392264
1636	23.8	11.0	1.0	chr15	101059412	101059911	(931278)	+	L1MC5	LINE/L1	7612	8169	(1135)	1392276
1996	8.6	0.4	0.4	chr16	91097	91353	(90246992)	+	AluSq2	SINE/Alu	2	258	(55)	1394154
13	12.8	2.6	5.1	chr16	91360	91397	(90246948)	+	(AATAA)n	Simple_repeat	1	39	(0)	1394155
13	13.2	0.0	0.0	chr16	167017	167041	(90171304)	+	(CATT)n	Simple_repeat	1	25	(0)	1394290
2339	6.0	0.0	0.0	chr16	234079	234389	(90103956)	C	AluY	SINE/Alu	(0)	311	1	1394434
28	17.8	0.0	0.0	chr16	547208	547264	(89791081)	+	GA-rich	Low_complexity	1	57	(0)	1394954
219	31.6	3.9	0.0	chr16	566783	566880	(89771465)	C	L2c	LINE/L2	(275)	3112	3011	1394964
11	6.7	5.4	7.7	chr16	641936	641972	(89696373)	+	(CCGGCGG)n	Simple_repeat	1	39	(0)	1395043
16	8.6	0.0	10.9	chr16	642051	642096	(89696249)	+	G-rich	Low_complexity	1	46	(0)	1395044
17	4.0	0.0	3.6	chr16	642259	642286	(89696059)	+	(GCCCG)n	Simple_repeat	1	28	(0)	1395045
257	34.7	8.0	6.7	chr16	708286	708631	(89629714)	+	L2b	LINE/L2	3023	3373	(2)	1395103
309	30.0	14.0	0.5	chr16	744165	744355	(89593990)	C	MLT1C	LTR/ERVL-MaLR	(7)	498	278	1395142
1175	12.7	0.6	0.0	chr16	744373	744537	(89593808)	C	AluJb	SINE/Alu	(17)	295	130	1395143
2079	11.6	0.0	1.0	chr16	744542	744835	(89593510)	C	AluY	SINE/Alu	(5)	306	16	1395144
14	0.0	0.0	0.0	chr16	982188	982205	(89356140)	+	(GCG)n	Simple_repeat	1	18	(0)	1395381
22	13.6	1.9	3.8	chr16	1277967	1278018	(89060327)	+	G-rich	Low_complexity	1	53	(0)	1395679
223	18.8	0.0	2.0	chr16	1332551	1332599	(89005746)	+	MER5A	DNA/hAT-Charlie	7	54	(135)	1395756
1381	16.3	5.4	7.3	chr16	1332615	1332915	(89005430)	+	AluJo	SINE/Alu	6	300	(12)	1395757
13	14.2	3.2	0.0	chr16	1984505	1984535	(88353810)	+	(CCCCGC)n	Simple_repeat	1	32	(0)	1396746
11	9.5	11.8	0.0	chr16	1992691	1992724	(88345621)	+	(GCGCACG)n	Simple_repeat	1	38	(0)	1396754
2125	11.1	0.0	6.9	chr16	2152390	2152722	(88185623)	+	AluSx3	SINE/Alu	1	310	(1)	1396966
12	13.9	6.1	8.6	chr16	2857725	2857790	(87480555)	+	(AGAGGCG)n	Simple_repeat	1	70	(0)	1398033
33	10.5	4.8	0.0	chr16	2857943	2858004	(87480341)	+	GA-rich	Low_complexity	1	65	(0)	1398034
16	4.5	0.0	0.0	chr16	2969361	2969383	(87368962)	+	(GCC)n	Simple_repeat	1	23	(0)	1398274
13	16.3	2.8	2.7	chr16	3013386	3013421	(87324924)	+	(GCTGG)n	Simple_repeat	1	37	(0)	1398334
13	24.8	4.2	0.0	chr16	3023699	3023746	(87314599)	+	(CCCCAG)n	Simple_repeat	1	50	(0)	1398347
204	27.6	11.5	4.7	chr16	3283093	3283221	(87055124)	+	MER5B	DNA/hAT-Charlie	30	168	(10)	1398902
22	24.8	1.9	6.4	chr16	4315795	4315827	(86022518)	+	(CCCCCCT)n	Simple_repeat	15	110	(0)	1400931
18	14.9	0.0	2.6	chr16	4315896	4315934	(86022411)	+	G-rich	Low_complexity	1	39	(0)	1400933
23	17.8	7.1	4.8	chr16	4315935	4315948	(86022397)	+	(CCTC)n	Simple_repeat	1	41	(64)	1400934
18	26.0	0.0	4.6	chr16	4315949	4316013	(86022332)	+	(CCT)n	Simple_repeat	1	65	(0)	1400935
1817	11.9	4.5	0.7	chr16	4402268	4402544	(85935801)	C	AluJb	SINE/Alu	(24)	288	1	1401072
3013	18.5	5.9	8.5	chr16	4539130	4539401	(85798944)	+	LTR8	LTR/ERV1	1	254	(437)	1401338
26	12.6	3.9	0.0	chr16	4693887	4693938	(85644407)	+	G-rich	Low_complexity	1	54	(0)	1401668
16	15.1	6.8	0.0	chr16	4694053	4694096	(85644249)	+	(GGCCTG)n	Simple_repeat	1	47	(0)	1401669
1467	15.1	3.5	0.0	chr16	5249687	5249905	(85088440)	+	AluSg	SINE/Alu	1	227	(83)	1402890
681	16.7	3.9	0.8	chr16	5250027	5250152	(85088193)	+	AluSx3	SINE/Alu	176	305	(6)	1402891
2241	6.0	1.4	0.0	chr16	5250259	5250541	(85087804)	C	L1PA8	LINE/L1	(0)	6172	5886	1402892
271	34.3	8.8	1.5	chr16	5421754	5422171	(84916174)	+	L1ME3G	LINE/L1	185	461	(463)	1403258
171	24.2	10.0	2.1	chr16	5422177	5423142	(84915203)	+	GA-rich	Low_complexity	1	1063	(0)	1403259
834	25.6	4.9	5.5	chr16	5423146	5423455	(84914890)	C	L1MD2	LINE/L1	(24)	6335	6028	1403260
120	4.1	0.0	0.0	chr16	8660781	8660907	(81677438)	+	(GGA)n	Simple_repeat	1	127	(0)	1409531
646	28.8	5.7	1.4	chr16	8798340	8798557	(81539788)	+	MIRb	SINE/MIR	32	259	(9)	1409897
18	29.8	1.3	2.6	chr16	9091996	9092072	(81246273)	+	GA-rich	Low_complexity	1	78	(0)	1410575
640	25.5	6.7	0.0	chr16	9647762	9647914	(80690431)	+	MER5A1	DNA/hAT-Charlie	2	165	(1)	1411810
151	18.8	5.5	1.4	chr16	11596453	11596852	(78741493)	+	GA-rich	Low_complexity	1	422	(0)	1416055
576	25.4	10.2	3.1	chr16	11596872	11597062	(78741283)	C	MIRb	SINE/MIR	(21)	247	42	1416056
16	13.3	0.0	5.4	chr16	11915554	11915590	(78422755)	+	(GCC)n	Simple_repeat	1	37	(0)	1416783
17	4.3	0.0	0.0	chr16	11915649	11915672	(78422673)	+	(GCT)n	Simple_repeat	1	24	(0)	1416784
35	0.0	0.0	0.0	chr16	11915674	11915705	(78422640)	+	(CCG)n	Simple_repeat	1	32	(0)	1416785
13	22.7	0.0	0.0	chr16	11915898	11915929	(78422416)	+	(GCG)n	Simple_repeat	1	32	(0)	1416786
187	30.8	1.1	4.2	chr16	15601536	15601630	(74736715)	+	L2c	LINE/L2	3034	3125	(262)	1424796
376	24.5	16.4	3.2	chr16	15897829	15897998	(74440347)	C	MIRb	SINE/MIR	(64)	204	6	1425512
67	22.5	2.2	4.8	chr16	15898035	15898063	(74440282)	+	(CTCCTC)n	Simple_repeat	1	147	(83)	1425513
22	42.9	1.1	2.8	chr16	15898067	15898243	(74440102)	+	(TCT)n	Simple_repeat	1	179	(0)	1425514
67	22.5	2.2	4.8	chr16	15898246	15898259	(74440086)	+	(CTCCTC)n	Simple_repeat	148	230	(0)	1425513
280	30.8	0.5	1.6	chr16	16003688	16003983	(74334362)	+	(ATGG)n	Simple_repeat	1	292	(0)	1425825
26	7.7	3.4	3.3	chr16	16003985	16004043	(74334302)	+	(TGGA)n	Simple_repeat	1	61	(0)	1425826
206	22.4	10.1	7.0	chr16	16004158	16004272	(74334073)	C	L2c	LINE/L2	(617)	2802	2684	1425816
16	4.5	0.0	0.0	chr16	18925988	18926010	(71412335)	+	(GCC)n	Simple_repeat	1	23	(0)	1432179
34	2.9	0.0	0.0	chr16	18926157	18926192	(71412153)	+	(AGG)n	Simple_repeat	1	36	(0)	1432180
13	23.9	0.0	0.0	chr16	18926348	18926382	(71411963)	+	GA-rich	Low_complexity	1	35	(0)	1432181
18	10.8	0.0	0.0	chr16	18983990	18984019	(71354326)	+	(GGC)n	Simple_repeat	1	30	(0)	1432377
46	23.0	1.4	4.8	chr16	19185069	19185213	(71153132)	+	(TCCT)n	Simple_repeat	1	147	(0)	1432913
2096	10.5	0.3	6.3	chr16	19185305	19185619	(71152726)	+	AluJo	SINE/Alu	1	296	(16)	1432914
456	30.7	7.2	4.2	chr16	21084060	21084273	(69254072)	+	MIRb	SINE/MIR	33	253	(15)	1437117
15	12.0	0.0	0.0	chr16	21301852	21301878	(69036467)	+	(GCG)n	Simple_repeat	1	27	(0)	1437616
2327	7.1	0.0	0.3	chr16	21663561	21663868	(68674477)	C	AluSx1	SINE/Alu	(0)	312	1	1438337
889	21.5	14.3	2.5	chr16	21663869	21663940	(68674405)	C	L1MC5	LINE/L1	(348)	8956	8882	1438335
15	29.0	0.0	4.4	chr16	23510188	23510255	(66828090)	+	(CCCGGC)n	Simple_repeat	1	68	(0)	1442437
23	30.6	1.2	0.0	chr16	23510378	23510461	(66827884)	+	(CCGCCG)n	Simple_repeat	1	85	(0)	1442438
52	28.5	3.0	2.4	chr16	27854178	27854377	(62483968)	+	GA-rich	Low_complexity	1	206	(0)	1452063
20	23.8	1.4	4.0	chr16	28554226	28554299	(61784046)	+	G-rich	Low_complexity	1	75	(0)	1453837
41	4.5	0.0	0.0	chr16	29595078	29595123	(60743222)	+	(GAG)n	Simple_repeat	1	46	(0)	1456054
13	23.9	0.0	0.0	chr16	29595282	29595316	(60743029)	+	GA-rich	Low_complexity	1	35	(0)	1456055
20	16.1	5.3	1.7	chr16	29805896	29805952	(60532393)	+	(CTCGCG)n	Simple_repeat	1	60	(0)	1456607
24	25.6	2.1	3.2	chr16	29806010	29806102	(60532243)	+	(CCCCTC)n	Simple_repeat	1	95	(0)	1456608
13	11.3	0.0	8.6	chr16	29814178	29814212	(60524133)	+	(CCT)n	Simple_repeat	1	35	(0)	1456618
13	16.8	0.0	5.4	chr16	29899618	29899654	(60438691)	+	GA-rich	Low_complexity	1	37	(0)	1456816
13	23.5	0.0	0.0	chr16	29900111	29900145	(60438200)	+	(GCCCG)n	Simple_repeat	1	35	(0)	1456817
16	16.9	0.0	0.0	chr16	29900223	29900255	(60438090)	+	(CCGA)n	Simple_repeat	1	33	(0)	1456818
16	21.8	5.0	1.6	chr16	29900306	29900365	(60437980)	+	(CCGCC)n	Simple_repeat	1	63	(0)	1456819
378	32.1	1.2	12.0	chr16	30021886	30021966	(60316379)	+	MIR	SINE/MIR	83	154	(108)	1457091
2351	9.7	1.0	0.3	chr16	30021967	30022276	(60316069)	+	AluSx	SINE/Alu	1	312	(0)	1457092
17	22.0	1.8	3.5	chr16	30064328	30064383	(60273962)	+	G-rich	Low_complexity	1	57	(0)	1457196
25	10.2	0.0	2.3	chr16	30183646	30183689	(60154656)	+	(CTC)n	Simple_repeat	1	44	(0)	1457487
15	17.7	5.0	2.4	chr16	30183779	30183818	(60154527)	+	(GC)n	Simple_repeat	1	42	(0)	1457488
24	20.8	0.0	1.8	chr16	30335132	30335188	(60003157)	+	GA-rich	Low_complexity	1	57	(0)	1457788
16	19.9	0.0	0.0	chr16	30335313	30335347	(60002998)	+	GA-rich	Low_complexity	1	35	(0)	1457789
15	7.0	2.9	5.7	chr16	30527310	30527343	(59811002)	+	(CTC)n	Simple_repeat	1	35	(0)	1458286
41	21.8	0.0	0.0	chr16	30659836	30659925	(59678420)	+	GA-rich	Low_complexity	1	90	(0)	1458577
12	28.1	3.9	0.0	chr16	30775721	30775772	(59562573)	+	(CTGGCG)n	Simple_repeat	1	54	(0)	1458832
11	19.1	5.9	3.7	chr16	30775915	30775965	(59562380)	+	G-rich	Low_complexity	1	54	(0)	1458833
17	22.8	6.2	2.4	chr16	30805612	30805691	(59532654)	+	(TCCGGC)n	Simple_repeat	1	85	(0)	1458895
48	17.2	3.7	6.5	chr16	30923456	30923618	(59414727)	+	GA-rich	Low_complexity	1	169	(0)	1459205
14	23.0	0.0	0.0	chr16	30923682	30923733	(59414612)	+	(CCCCTTT)n	Simple_repeat	1	52	(0)	1459206
17	21.5	0.0	3.9	chr16	30923794	30923845	(59414500)	+	G-rich	Low_complexity	1	52	(0)	1459207
13	27.9	1.7	3.3	chr16	30949046	30949105	(59389240)	+	(GCTCCG)n	Simple_repeat	1	61	(0)	1459271
30	33.2	0.0	0.0	chr16	30979804	30979911	(59358434)	+	GA-rich	Low_complexity	1	108	(0)	1459330
22	22.4	2.9	1.4	chr16	30979960	30980040	(59358305)	+	(CGCCGC)n	Simple_repeat	1	82	(0)	1459331
20	13.4	2.3	2.3	chr16	31010407	31010449	(59327896)	+	(CTC)n	Simple_repeat	1	44	(0)	1459380
15	18.7	4.3	4.2	chr16	31142906	31142951	(59195394)	+	(GC)n	Simple_repeat	1	48	(0)	1459691
14	13.9	2.9	2.9	chr16	31202707	31202740	(59135605)	+	(GCC)n	Simple_repeat	1	35	(0)	1459828
17	16.6	0.0	4.5	chr16	31214642	31214685	(59123660)	+	(GGCTG)n	Simple_repeat	1	44	(0)	1459868
1161	18.8	10.1	7.8	chr16	46632563	46633011	(43705334)	C	MER52C	LTR/ERV1	(0)	1278	882	1465720
5387	13.7	9.1	0.9	chr16	46633073	46634052	(43704293)	C	MER52C	LTR/ERV1	(210)	1068	1	1465721
15	20.6	3.3	4.8	chr16	46884349	46884409	(43453936)	+	G-rich	Low_complexity	1	63	(0)	1466256
426	15.8	2.6	0.0	chr16	49158048	49158123	(41180222)	C	MER96	DNA/hAT-Tip100	(0)	175	98	1470085
542	25.9	15.8	1.5	chr16	49348687	49348886	(40989459)	+	MIRb	SINE/MIR	19	252	(16)	1470374
1271	23.6	9.4	1.7	chr16	49350240	49350593	(40987752)	+	MLT1B	LTR/ERVL-MaLR	1	384	(6)	1470376
41	10.3	1.3	3.8	chr16	49700885	49700963	(40637382)	+	G-rich	Low_complexity	1	80	(0)	1470954
196	28.8	1.7	0.0	chr16	49716955	49717013	(40621332)	C	L3	LINE/CR1	(5)	4094	4035	1470982
793	24.8	5.4	1.9	chr16	49838247	49838460	(40499885)	+	MIR	SINE/MIR	22	243	(19)	1471213
32	12.8	7.6	1.2	chr16	49855654	49855732	(40482613)	+	(GCTC)n	Simple_repeat	1	85	(0)	1471240
317	26.7	4.4	0.0	chr16	49890851	49890936	(40447409)	C	MIR	SINE/MIR	(16)	246	157	1471318
184	34.5	6.2	1.1	chr16	49890949	49891039	(40447306)	C	MIRc	SINE/MIR	(171)	97	2	1471319
55	13.2	6.2	3.9	chr16	49891279	49891422	(40446923)	+	(TA)n	Simple_repeat	1	153	(0)	1471320
21	0.0	0.0	0.0	chr16	50152773	50152795	(40185550)	+	(T)n	Simple_repeat	1	23	(0)	1471931
25	22.8	2.5	2.4	chr16	50153139	50153218	(40185127)	+	G-rich	Low_complexity	1	82	(0)	1471932
1515	18.1	3.9	1.4	chr16	51172765	51173041	(39165304)	C	AluJr	SINE/Alu	(26)	286	3	1473866
99	27.3	4.1	3.7	chr16	53042154	53042591	(37295754)	+	(CCCT)n	Simple_repeat	1	456	(0)	1477083
54	39.1	2.0	4.3	chr16	53042592	53042605	(37295740)	+	(TCCCCC)n	Simple_repeat	4	464	(0)	1477084
260	13.6	0.2	0.2	chr16	53052893	53053313	(37285032)	+	(CCT)n	Simple_repeat	1	422	(0)	1477111
548	26.4	0.6	6.2	chr16	53055421	53055598	(37282747)	C	MER5B	DNA/hAT-Charlie	(6)	172	5	1477119
14	18.3	2.7	0.0	chr16	53099565	53099601	(37238744)	+	(TCCTTCC)n	Simple_repeat	1	38	(0)	1477231
30	33.0	0.0	2.3	chr16	54285122	54285250	(36053095)	+	(CTC)n	Simple_repeat	1	129	(0)	1479228
12	14.8	0.0	5.9	chr16	54286156	54286189	(36052156)	+	(GCTGC)n	Simple_repeat	1	34	(0)	1479231
21	9.8	0.0	0.0	chr16	54286211	54286243	(36052102)	+	(GCG)n	Simple_repeat	1	33	(0)	1479232
24	23.2	7.4	2.3	chr16	54286378	54286498	(36051847)	+	(CGCTCCT)n	Simple_repeat	1	130	(0)	1479233
14	12.2	8.1	0.0	chr16	54286558	54286594	(36051751)	+	(CTCTCCT)n	Simple_repeat	1	40	(0)	1479234
20	23.8	3.6	3.5	chr16	56191467	56191550	(34146795)	+	(TCCCTC)n	Simple_repeat	1	87	(0)	1482660
32	20.2	1.3	1.3	chr16	56191748	56191823	(34146522)	+	(CCG)n	Simple_repeat	1	77	(0)	1482661
14	26.1	0.0	0.0	chr16	56269282	56269295	(34069050)	+	(TGC)n	Simple_repeat	1	40	(0)	1482801
19	4.0	0.0	0.0	chr16	56269296	56269321	(34069024)	+	(CTC)n	Simple_repeat	1	26	(0)	1482802
288	24.4	16.9	4.7	chr16	56269454	56269582	(34068763)	C	MIR	SINE/MIR	(0)	262	115	1482803
275	26.6	6.0	5.2	chr16	56317979	56318093	(34020252)	C	MER20B	DNA/hAT-Charlie	(665)	118	3	1482889
16	25.2	0.0	0.0	chr16	56318573	56318610	(34019735)	+	(TG)n	Simple_repeat	1	38	(0)	1482890
666	20.4	0.0	0.0	chr16	56637715	56637846	(33700499)	C	FLAM_A	SINE/Alu	(7)	135	4	1483462
594	23.6	5.6	15.5	chr16	56990048	56990388	(33347957)	C	L1MC5	LINE/L1	(59)	9245	8989	1484120
12	21.6	5.3	3.3	chr16	57106293	57106349	(33231996)	+	(GCCCCT)n	Simple_repeat	1	60	(0)	1484366
17	29.4	0.0	3.0	chr16	57284711	57284776	(33053569)	+	(CCG)n	Simple_repeat	1	66	(0)	1484720
310	28.2	3.5	3.5	chr16	57649436	57649549	(32688796)	C	L2c	LINE/L2	(188)	3199	3086	1485495
501	24.1	16.7	1.2	chr16	57667830	57668001	(32670344)	C	MIRb	SINE/MIR	(37)	231	28	1485534
21	20.2	0.0	4.8	chr16	58025806	58025867	(32312478)	+	(CGCT)n	Simple_repeat	1	62	(0)	1486285
100	25.0	2.7	3.2	chr16	66269920	66270257	(24068088)	+	GA-rich	Low_complexity	1	347	(0)	1499411
373	33.9	7.4	4.4	chr16	66361205	66361636	(23976709)	+	L2b	LINE/L2	2924	3369	(6)	1499576
461	32.3	10.3	3.9	chr16	66364824	66365187	(23973158)	+	L2	LINE/L2	1661	2050	(1369)	1499584
573	21.8	20.1	0.3	chr16	66428534	66428716	(23909629)	+	MIRb	SINE/MIR	32	249	(19)	1499720
15	17.2	2.4	2.4	chr16	66552529	66552569	(23785776)	+	(GCGCGT)n	Simple_repeat	1	42	(0)	1499952
319	10.8	5.8	3.0	chr16	66873530	66873596	(23464749)	C	MIRc	SINE/MIR	(140)	128	60	1500596
240	9.9	3.5	3.8	chr16	66873628	66874090	(23464255)	+	(CTC)n	Simple_repeat	1	479	(0)	1500597
15	21.6	3.5	3.4	chr16	67150351	67150407	(23187938)	+	(CGCTCG)n	Simple_repeat	1	59	(0)	1501184
13	23.1	0.0	9.0	chr16	67174473	67174539	(23163806)	+	(GCAGG)n	Simple_repeat	1	67	(0)	1501216
45	30.6	0.0	0.0	chr16	67174779	67174918	(23163427)	+	(GAGCCA)n	Simple_repeat	1	140	(0)	1501217
184	30.6	6.6	2.3	chr16	67249799	67249885	(23088460)	C	MIRb	SINE/MIR	(1)	267	177	1501309
12	25.5	0.0	0.0	chr16	67563295	67563331	(22775014)	+	(CCTG)n	Simple_repeat	1	37	(0)	1501894
263	40.2	5.4	1.9	chr16	67893884	67894045	(22444300)	+	L2b	LINE/L2	2756	2923	(496)	1502545
352	33.1	3.1	0.7	chr16	67968823	67968977	(22369368)	+	MIRb	SINE/MIR	88	246	(22)	1502652
323	24.0	7.8	5.6	chr16	68519342	68519555	(21818790)	+	L2b	LINE/L2	3079	3295	(92)	1503683
214	33.0	3.7	1.0	chr16	69089890	69089993	(21248352)	C	MIRc	SINE/MIR	(20)	248	142	1505067
16	31.3	1.4	1.4	chr16	69106518	69106590	(21231755)	+	(CCCCCTC)n	Simple_repeat	1	74	(0)	1505104
13	24.9	2.0	2.0	chr16	69311577	69311625	(21026720)	+	G-rich	Low_complexity	1	50	(0)	1505548
17	8.9	5.3	2.5	chr16	69311879	69311920	(21026425)	+	(CTCCT)n	Simple_repeat	1	43	(0)	1505549
22	22.2	2.9	6.7	chr16	73036557	73036658	(17301687)	+	G-rich	Low_complexity	1	105	(0)	1512313
23	17.9	1.9	1.8	chr16	73047504	73047557	(17290788)	+	GA-rich	Low_complexity	1	55	(0)	1512327
16	0.0	0.0	4.2	chr16	73071405	73071428	(17266917)	+	(GAGG)n	Simple_repeat	1	24	(0)	1512355
25	20.3	0.0	0.0	chr16	73071457	73071509	(17266836)	+	(CTG)n	Simple_repeat	1	53	(0)	1512356
701	29.5	4.1	3.8	chr16	74070042	74070413	(16267932)	C	LTR16E1	LTR/ERVL	(0)	538	108	1513946
15	7.8	0.0	3.5	chr16	75516837	75516865	(14821480)	+	(GCCGG)n	Simple_repeat	1	29	(0)	1516961
1870	17.7	12.7	2.2	chr16	77963152	77963595	(12374750)	+	MLT1D	LTR/ERVL-MaLR	9	505	(0)	1520846
29	6.2	0.0	0.0	chr16	79601656	79601689	(10736656)	+	(AC)n	Simple_repeat	1	34	(0)	1523839
12	15.4	5.3	2.5	chr16	81703843	81703880	(8634465)	+	G-rich	Low_complexity	1	40	(0)	1527810
840	23.8	3.6	1.1	chr16	83831186	83831407	(6506938)	C	MIR	SINE/MIR	(29)	233	7	1531675
13	9.2	12.0	3.6	chr16	83831575	83831624	(6506721)	+	(CTCCTCT)n	Simple_repeat	1	56	(0)	1531676
91	22.3	4.2	3.4	chr16	84534940	84535248	(5803097)	+	(CTTCTC)n	Simple_repeat	1	322	(0)	1533007
584	24.0	11.1	1.3	chr16	84561316	84561469	(5776876)	C	7SLRNA	srpRNA	(149)	171	1	1533081
255	22.3	2.5	1.6	chr16	84561736	84561815	(5776530)	+	MIR	SINE/MIR	9	94	(174)	1533082
77	29.6	3.0	5.7	chr16	84618272	84618768	(5719577)	+	(CCTCTC)n	Simple_repeat	1	512	(0)	1533213
70	10.8	3.3	0.8	chr16	85312688	85312809	(5025536)	+	(GGA)n	Simple_repeat	1	126	(0)	1534613
180	41.9	4.7	4.7	chr16	85570736	85570993	(4767352)	C	L2c	LINE/L2	(18)	3369	3112	1535078
377	23.2	2.9	0.0	chr16	85571065	85571163	(4767182)	C	MER5A1	DNA/hAT-Charlie	(10)	156	55	1535079
93	3.2	4.5	2.1	chr16	85653192	85653325	(4685020)	+	(CCT)n	Simple_repeat	1	140	(0)	1535177
114	23.4	5.1	4.7	chr16	85716249	85716734	(4621611)	+	GA-rich	Low_complexity	1	511	(0)	1535286
15	10.2	9.1	2.1	chr16	85799767	85799810	(4538535)	+	(GGCCG)n	Simple_repeat	1	48	(0)	1535469
191	26.9	11.8	0.0	chr16	86288578	86288644	(4049701)	+	MIR	SINE/MIR	158	233	(29)	1536374
27	3.5	0.0	0.0	chr16	86510482	86510511	(3827834)	+	(TCC)n	Simple_repeat	1	30	(0)	1536783
19	20.8	1.7	1.7	chr16	86510512	86510563	(3827782)	+	(CGGCGG)n	Simple_repeat	6	57	(0)	1536784
34	2.5	2.5	0.0	chr16	86512680	86512719	(3825626)	+	(CAGG)n	Simple_repeat	1	41	(0)	1536787
2976	27.1	5.3	4.7	chr16	87203065	87203686	(3134659)	+	L1MD2	LINE/L1	576	1186	(5454)	1538003
17	10.6	11.3	1.7	chr16	87575156	87575208	(2763137)	+	(CCTG)n	Simple_repeat	1	59	(0)	1538701
190	31.1	0.0	1.6	chr16	87604744	87604805	(2733540)	C	L2	LINE/L2	(866)	2553	2493	1538766
1070	26.2	6.9	1.8	chr16	87877541	87877925	(2460420)	+	L1MB5	LINE/L1	5747	6152	(22)	1539218
383	30.6	9.4	4.0	chr16	87877947	87878096	(2460249)	+	MIRc	SINE/MIR	23	181	(87)	1539219
456	31.1	9.6	3.0	chr16	87919390	87919721	(2418624)	+	MLT1K	LTR/ERVL-MaLR	232	587	(8)	1539316
182	28.4	3.8	3.8	chr16	88560987	88561092	(1777253)	C	MIR3	SINE/MIR	(13)	195	90	1540120
224	41.8	0.0	0.7	chr16	88561138	88561272	(1777073)	C	MIR	SINE/MIR	(7)	255	122	1540121
297	37.4	0.0	1.5	chr16	88611131	88611263	(1727082)	C	L1PA17	LINE/L1	(16)	6150	6020	1540215
71	20.0	5.3	2.5	chr16	88611272	88611498	(1726847)	+	G-rich	Low_complexity	1	239	(0)	1540216
18	10.5	0.0	0.0	chr16	88611477	88611507	(1726838)	+	(GGAGAA)n	Simple_repeat	1	31	(0)	1540217
243	30.2	18.2	0.0	chr16	88649568	88649729	(1688616)	C	L2b	LINE/L2	(208)	3167	2970	1540267
13	13.2	6.1	0.0	chr16	88649736	88649768	(1688577)	+	G-rich	Low_complexity	1	35	(0)	1540268
140	18.5	2.6	3.6	chr16	88993555	88993906	(1344439)	+	(CCTTCCT)n	Simple_repeat	1	361	(0)	1540673
2049	9.9	0.0	3.8	chr16	89240660	89240833	(1097512)	+	AluSz	SINE/Alu	117	281	(31)	1540965
449	34.6	8.4	7.2	chr16	89240834	89240911	(1097434)	+	L1MEf	LINE/L1	5357	5425	(1119)	1540956
365	28.8	3.8	9.8	chr16	89241276	89241529	(1096816)	C	LTR55	LTR/ERVL?	(181)	367	130	1540967
1160	21.6	0.7	3.8	chr16	89363782	89364068	(974277)	+	AluJr	SINE/Alu	9	286	(26)	1541143
16	5.2	0.0	0.0	chr16	89364069	89364088	(974257)	+	(CA)n	Simple_repeat	1	20	(0)	1541144
29	3.2	0.0	0.0	chr16	89565284	89565315	(773030)	+	(TGGGC)n	Simple_repeat	1	32	(0)	1541486
18	25.4	4.8	4.6	chr16	89613438	89613540	(724805)	+	(TCCC)n	Simple_repeat	1	108	(0)	1541546
37	16.8	1.3	1.3	chr16	89828931	89829007	(509338)	+	(CTCC)n	Simple_repeat	1	78	(0)	1541935
580	16.7	0.0	0.0	chr16	89926575	89926670	(411675)	C	AluSx3	SINE/Alu	(13)	298	203	1542090
2472	5.4	0.0	0.0	chr16	89948269	89948562	(389783)	C	AluY	SINE/Alu	(17)	294	1	1542143
1252	12.9	0.0	0.0	chr17	258758	258927	(82998514)	C	AluJb	SINE/Alu	(9)	303	134	1544891
216	28.2	4.1	0.0	chr17	307517	307587	(82949854)	+	L2c	LINE/L2	3279	3352	(35)	1544962
315	32.0	9.2	6.6	chr17	336508	336888	(82920553)	+	L2	LINE/L2	2677	3068	(351)	1545003
50	7.7	2.7	7.0	chr17	1031839	1031949	(82225492)	+	(CCCT)n	Simple_repeat	1	114	(0)	1546240
29	14.4	2.8	4.9	chr17	1079008	1079079	(82178362)	+	G-rich	Low_complexity	1	70	(0)	1546310
30	25.4	0.0	1.3	chr17	1079165	1079241	(82178200)	+	(CA)n	Simple_repeat	1	77	(0)	1546311
2318	9.5	0.3	0.0	chr17	1202890	1203185	(82054256)	C	AluSx	SINE/Alu	(15)	297	1	1546556
16	8.5	4.7	6.7	chr17	1456146	1456192	(81801249)	+	(GCC)n	Simple_repeat	1	46	(0)	1547172
924	12.7	0.0	4.9	chr17	1585546	1585687	(81671754)	C	AluJr4	SINE/Alu	(177)	135	1	1547409
2155	9.1	3.0	0.0	chr17	1642710	1642996	(81614445)	C	AluSx	SINE/Alu	(11)	301	6	1547522
12	22.5	3.9	7.4	chr17	2303520	2303559	(80953882)	+	G-rich	Low_complexity	1	68	(13)	1548855
15	17.7	0.0	0.0	chr17	2303560	2303591	(80953850)	+	GA-rich	Low_complexity	1	32	(0)	1548856
30	23.5	4.4	4.3	chr17	2337519	2337653	(80919788)	+	(GGCGGC)n	Simple_repeat	1	141	(0)	1548930
17	22.6	0.0	2.1	chr17	2337839	2337886	(80919555)	+	G-rich	Low_complexity	1	48	(0)	1548931
22	25.0	2.2	4.3	chr17	2749665	2749756	(80507685)	+	GA-rich	Low_complexity	1	94	(0)	1549847
341	25.9	10.1	3.0	chr17	2750082	2750266	(80507175)	+	MIR3	SINE/MIR	33	238	(30)	1549848
238	25.1	13.8	0.0	chr17	3534771	3534900	(79722541)	+	MIR3	SINE/MIR	17	180	(88)	1551211
164	18.0	3.1	3.3	chr17	3535129	3535541	(79721900)	+	(CCTTCCT)n	Simple_repeat	1	426	(0)	1551212
12	7.9	7.4	0.0	chr17	3696149	3696175	(79561266)	+	G-rich	Low_complexity	1	29	(0)	1551526
20	6.7	3.1	0.0	chr17	3696261	3696292	(79561149)	+	(CCT)n	Simple_repeat	1	33	(0)	1551527
2321	6.0	4.8	1.0	chr17	3696440	3696739	(79560702)	C	AluSx	SINE/Alu	(0)	312	1	1551528
707	23.0	6.4	1.4	chr17	4186437	4186643	(79070798)	C	HAL1	LINE/L1	(106)	2401	2184	1552481
26	12.8	3.9	0.0	chr17	4186681	4186731	(79070710)	+	(TCC)n	Simple_repeat	1	53	(0)	1552482
23	23.2	4.5	2.1	chr17	4807086	4807219	(78450222)	+	(GCCCCG)n	Simple_repeat	1	137	(0)	1553827
11	24.1	0.0	0.0	chr17	4807535	4807568	(78449873)	+	G-rich	Low_complexity	1	34	(0)	1553828
2445	5.8	0.0	3.2	chr17	5511149	5511456	(77745985)	+	AluSx1	SINE/Alu	1	298	(14)	1555281
59	19.1	4.6	3.3	chr17	5511721	5511744	(77745697)	+	(TCTT)n	Simple_repeat	1	179	(0)	1555282
52	19.6	2.0	4.7	chr17	5511745	5511891	(77745550)	+	(TTTCTT)n	Simple_repeat	1	150	(0)	1555283
371	28.2	9.6	5.0	chr17	6163132	6163389	(77094052)	+	MamRep1527	LTR	296	566	(403)	1556511
29	3.2	0.0	0.0	chr17	6453463	6453494	(76803947)	+	(GAGGCT)n	Simple_repeat	1	32	(0)	1557122
233	30.4	7.2	4.0	chr17	6462719	6462893	(76794548)	C	MER5A	DNA/hAT-Charlie	(5)	184	4	1557140
13	16.3	2.1	6.1	chr17	7239468	7239500	(76017941)	+	(GCC)n	Simple_repeat	1	30	(0)	1558483
28	4.2	0.0	8.6	chr17	7239501	7239558	(76017883)	+	(CCT)n	Simple_repeat	1	58	(0)	1558484
13	16.3	2.1	6.1	chr17	7239559	7239572	(76017869)	+	(GCC)n	Simple_repeat	1	15	(0)	1558485
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
502	29.9	12.0	4.0	chr17	7687850	7688124	(75569317)	+	L2a	LINE/L2	3125	3424	(2)	1559336
44	0.0	0.0	0.0	chr17	7884696	7884735	(75372706)	+	(GAG)n	Simple_repeat	1	40	(0)	1559697
13	24.4	4.2	0.0	chr17	7884747	7884794	(75372647)	+	(GCGG)n	Simple_repeat	1	50	(0)	1559698
63	21.0	0.0	0.0	chr17	7884824	7884954	(75372487)	+	GA-rich	Low_complexity	1	131	(0)	1559699
42	7.5	0.0	0.0	chr17	7885026	7885081	(75372360)	+	(CCG)n	Simple_repeat	1	56	(0)	1559700
299	23.7	9.7	0.0	chr17	8162499	8162591	(75094850)	+	MIR3	SINE/MIR	45	147	(61)	1560200
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
28	6.0	0.0	0.0	chr17	8888789	8888823	(74368618)	+	(TCC)n	Simple_repeat	1	35	(0)	1561655
328	28.3	16.6	3.7	chr17	13031667	13031912	(70225529)	C	MER102a	DNA/hAT-Charlie	(2)	328	45	1569080
1517	15.2	6.4	0.4	chr17	15917039	15917302	(67340139)	+	AluJr	SINE/Alu	1	281	(31)	1573893
23	6.9	1.9	7.4	chr17	16000038	16000090	(67257351)	+	G-rich	Low_complexity	1	54	(0)	1574054
14	10.4	6.4	6.0	chr17	16492205	16492251	(66765190)	+	(GCCG)n	Simple_repeat	1	50	(0)	1575080
32	25.5	1.6	4.7	chr17	16492252	16492330	(66765111)	+	(CGCCC)n	Simple_repeat	2	129	(0)	1575081
350	31.4	2.3	1.1	chr17	16492596	16492769	(66764672)	+	MER5A	DNA/hAT-Charlie	7	182	(7)	1575082
2013	20.0	5.3	0.5	chr17	16496301	16496731	(66760710)	C	LTR40c	LTR/ERVL	(12)	453	1	1575091
21	10.0	0.0	0.0	chr17	17568823	17568855	(65688586)	+	(TCC)n	Simple_repeat	1	33	(0)	1576870
278	33.8	7.5	3.5	chr17	17685258	17685606	(65571835)	C	L2b	LINE/L2	(12)	3363	2939	1577157
349	32.3	13.2	3.4	chr17	17685600	17686175	(65571266)	+	L2b	LINE/L2	2713	3364	(11)	1577158
194	30.4	6.1	4.2	chr17	17725213	17725308	(65532133)	+	MIR3	SINE/MIR	75	172	(36)	1577232
14	21.1	7.3	0.0	chr17	19533768	19533822	(63723619)	+	G-rich	Low_complexity	1	59	(0)	1580808
13	17.7	5.3	0.0	chr17	19868095	19868132	(63389309)	+	G-rich	Low_complexity	1	40	(0)	1581431
716	19.9	3.3	6.4	chr17	20008915	20009102	(63248339)	C	MER5A	DNA/hAT-Charlie	(3)	186	5	1581767
13	17.0	0.0	5.4	chr17	21464765	21464801	(61792640)	+	(CCTGC)n	Simple_repeat	1	37	(0)	1584305
12	13.3	9.3	2.1	chr17	27479243	27479285	(55778156)	+	(TCTGTGC)n	Simple_repeat	1	47	(0)	1586872
1265	27.0	7.0	3.0	chr17	28008849	28009341	(55248100)	C	Tigger11a	DNA/TcMar-Tigger	(164)	571	58	1587893
14	29.9	0.0	6.1	chr17	28645063	28645144	(54612297)	+	(CCCGG)n	Simple_repeat	1	82	(0)	1589065
16	21.9	3.3	0.0	chr17	28949300	28949355	(54308086)	+	G-rich	Low_complexity	1	57	(0)	1589654
395	32.5	0.0	0.0	chr17	28986484	28986614	(54270827)	C	MIRb	SINE/MIR	(94)	174	38	1589713
15	25.7	1.9	1.9	chr17	29613497	29613549	(53643892)	+	GA-rich	Low_complexity	1	54	(0)	1591012
13	5.7	10.0	4.5	chr17	29613602	29613641	(53643800)	+	(CGCCAG)n	Simple_repeat	1	44	(0)	1591013
12	16.9	2.9	2.8	chr17	30235684	30235718	(53021723)	+	(GCGGC)n	Simple_repeat	1	36	(0)	1592201
18	25.5	1.6	3.1	chr17	30600796	30600859	(52656582)	+	(CCG)n	Simple_repeat	1	65	(0)	1592819
436	30.4	7.1	1.2	chr17	30669581	30669740	(52587701)	+	MIR	SINE/MIR	34	203	(59)	1592975
16	16.5	3.8	5.5	chr17	31008692	31008744	(52248697)	+	(CCG)n	Simple_repeat	1	55	(0)	1593821
2494	8.1	0.7	0.0	chr17	31552989	31553295	(51704146)	C	AluSq2	SINE/Alu	(4)	309	1	1594805
2392	11.0	0.0	0.0	chr17	31743446	31743753	(51513688)	+	AluSc8	SINE/Alu	2	309	(2)	1595217
15	4.0	3.6	3.5	chr17	31744141	31744168	(51513273)	+	(GAGG)n	Simple_repeat	1	29	(0)	1595218
424	30.6	8.1	0.7	chr17	32085696	32085833	(51171608)	+	MIR	SINE/MIR	34	182	(80)	1596027
17	12.9	4.3	4.2	chr17	32519391	32519436	(50738005)	+	GA-rich	Low_complexity	1	48	(0)	1596957
18	29.4	2.5	1.2	chr17	32519470	32519549	(50737892)	+	(GGCGGC)n	Simple_repeat	1	82	(0)	1596958
356	31.0	8.7	1.2	chr17	34799240	34799399	(48458042)	+	MIRb	SINE/MIR	80	252	(16)	1601092
3174	9.6	8.8	0.6	chr17	35432211	35432724	(47824717)	C	MER51A	LTR/ERV1	(0)	634	75	1602203
45	0.0	0.0	0.0	chr17	35763898	35763938	(47493503)	+	(AAAT)n	Simple_repeat	1	41	(0)	1602753
19	25.7	4.0	3.9	chr17	35764050	35764148	(47493293)	+	(GGACGA)n	Simple_repeat	1	103	(0)	1602754
31	30.8	1.0	0.0	chr17	36545629	36545730	(46711711)	+	(GGC)n	Simple_repeat	1	103	(0)	1604135
83	18.3	2.1	2.5	chr17	36633492	36633688	(46623753)	+	GA-rich	Low_complexity	1	196	(0)	1604303
33	26.9	3.0	5.2	chr17	36645405	36645572	(46611869)	+	(CCT)n	Simple_repeat	1	173	(0)	1604327
20	3.9	3.7	0.0	chr17	36645673	36645699	(46611742)	+	(CT)n	Simple_repeat	1	28	(0)	1604328
11	24.7	4.0	1.9	chr17	36813548	36813597	(46443844)	+	GA-rich	Low_complexity	1	52	(0)	1604701
338	27.4	10.6	0.7	chr17	36813711	36813846	(46443595)	+	MIRb	SINE/MIR	36	186	(82)	1604702
14	21.8	4.3	2.0	chr17	36920526	36920572	(46336869)	+	(CTCT)n	Simple_repeat	1	49	(0)	1604953
25	21.2	8.1	3.0	chr17	36920573	36920647	(46336794)	+	(CCTCTCT)n	Simple_repeat	2	133	(0)	1604954
3967	21.8	6.6	5.8	chr17	37099780	37100814	(46156627)	+	L1MC4	LINE/L1	6794	7865	(177)	1605233
12	18.8	2.6	2.6	chr17	38256497	38256534	(45000907)	+	(ACCCTCC)n	Simple_repeat	1	39	(0)	1607466
56	12.2	0.0	0.0	chr17	38256651	38256740	(45000701)	+	(GCCCCA)n	Simple_repeat	1	90	(0)	1607467
17	27.1	3.6	3.5	chr17	38441382	38441464	(44815977)	+	(CTCTCTT)n	Simple_repeat	1	86	(0)	1607867
181	14.9	0.0	16.1	chr17	38441492	38441547	(44815894)	C	MIR3	SINE/MIR	(53)	155	109	1607868
25	19.2	3.4	8.2	chr17	38452083	38452200	(44805241)	+	(CCCT)n	Simple_repeat	1	122	(0)	1607890
222	22.6	20.0	1.5	chr17	38452535	38452675	(44804766)	+	MIR3	SINE/MIR	26	190	(78)	1607891
23	25.7	5.1	1.9	chr17	38563815	38563912	(44693529)	+	GA-rich	Low_complexity	1	103	(0)	1608098
16	18.9	0.0	0.0	chr17	38578685	38578720	(44678721)	+	(GCCCCC)n	Simple_repeat	1	36	(0)	1608119
12	26.2	0.0	2.3	chr17	38588500	38588542	(44668899)	+	G-rich	Low_complexity	1	43	(0)	1608135
506	35.6	2.7	0.0	chr17	38593506	38593685	(44663756)	+	MIR	SINE/MIR	76	260	(2)	1608142
23	23.0	5.6	6.0	chr17	38601883	38602025	(44655416)	+	GA-rich	Low_complexity	1	151	(0)	1608157
21	12.1	0.0	0.0	chr17	38602187	38602222	(44655219)	+	(CCTC)n	Simple_repeat	1	36	(0)	1608158
14	20.2	4.3	2.0	chr17	38715592	38715638	(44541803)	+	(TCC)n	Simple_repeat	1	49	(0)	1608427
25	10.9	0.0	0.0	chr17	38715766	38715805	(44541636)	+	(CCT)n	Simple_repeat	1	40	(0)	1608428
16	22.7	5.7	2.7	chr17	39197704	39197773	(44059668)	+	(CCCG)n	Simple_repeat	1	74	(0)	1609528
16	15.3	0.0	5.0	chr17	39244266	39244305	(44013136)	+	(CCT)n	Simple_repeat	1	40	(0)	1609615
26	20.9	0.0	4.2	chr17	39606308	39606379	(43651062)	+	(CCT)n	Simple_repeat	1	72	(0)	1610446
11	22.1	6.6	3.1	chr17	39606476	39606493	(43650948)	+	(GCCGTC)n	Simple_repeat	1	63	(0)	1610447
13	20.4	2.4	2.4	chr17	39606494	39606534	(43650907)	+	(CGT)n	Simple_repeat	1	42	(0)	1610448
190	34.3	7.0	2.2	chr17	39617371	39617507	(43639934)	+	L2b	LINE/L2	3048	3191	(184)	1610471
263	32.4	9.3	1.4	chr17	39617526	39617663	(43639778)	+	MIRb	SINE/MIR	38	187	(81)	1610472
1893	9.4	3.0	0.4	chr17	39753443	39753698	(43503743)	C	AluSz	SINE/Alu	(11)	301	39	1610714
5153	8.2	3.5	0.1	chr17	39947215	39947882	(43309559)	+	LTR8	LTR/ERV1	1	691	(0)	1611054
12	23.3	4.4	0.0	chr17	39980700	39980744	(43276697)	+	(TCCTCCA)n	Simple_repeat	1	47	(0)	1611118
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
16	10.7	7.1	2.2	chr17	39981111	39981152	(43276289)	+	(GACGGCA)n	Simple_repeat	1	45	(0)	1611121
1382	15.6	10.0	4.6	chr17	40039653	40039781	(43217660)	C	AluJb	SINE/Alu	(20)	292	141	1611227
2480	7.3	0.0	0.0	chr17	40039782	40040081	(43217360)	C	AluY	SINE/Alu	(10)	301	2	1611228
11	18.1	2.4	4.8	chr17	40063411	40063451	(43193990)	+	(CCCGCCG)n	Simple_repeat	1	42	(0)	1611289
12	25.7	2.1	2.0	chr17	40063469	40063516	(43193925)	+	(CCCGAGC)n	Simple_repeat	1	49	(0)	1611290
20	13.3	0.0	4.4	chr17	40111892	40111936	(43145505)	+	(TCTCCC)n	Simple_repeat	1	45	(0)	1611366
232	33.8	0.0	0.0	chr17	40111947	40112017	(43145424)	C	MER131	DNA?	(139)	76	6	1611367
381	28.7	8.4	0.0	chr17	41548571	41548734	(41708707)	+	MIRc	SINE/MIR	25	203	(65)	1613794
205	29.7	1.3	2.6	chr17	41810552	41810627	(41446814)	+	L2c	LINE/L2	2998	3072	(315)	1614354
19	15.2	2.5	9.8	chr17	42184176	42184255	(41073186)	+	(GGCGC)n	Simple_repeat	1	82	(0)	1615097
19	7.4	0.0	0.0	chr17	42184480	42184508	(41072933)	+	(GCA)n	Simple_repeat	1	29	(0)	1615098
257	33.0	9.2	1.6	chr17	42184602	42184826	(41072615)	+	L2c	LINE/L2	2989	3238	(149)	1615099
1674	6.9	12.6	0.4	chr17	42398263	42398507	(40858934)	C	AluSg7	SINE/Alu	(29)	280	2	1615548
349	33.9	1.5	5.1	chr17	42398508	42398581	(40858860)	+	MLT1O	LTR/ERVL-MaLR	122	193	(349)	1615546
20	16.7	2.0	2.0	chr17	42676445	42676493	(40580948)	+	(TCCCCG)n	Simple_repeat	1	50	(0)	1616130
13	33.2	0.0	1.8	chr17	42676646	42676701	(40580740)	+	GA-rich	Low_complexity	1	56	(0)	1616131
13	15.5	9.3	0.0	chr17	42745050	42745095	(40512346)	+	(GCGCCCC)n	Simple_repeat	1	50	(0)	1616277
2175	10.4	0.3	0.0	chr17	43368407	43368693	(39888748)	C	AluSx3	SINE/Alu	(23)	288	1	1617636
24	23.2	7.1	0.9	chr17	43833195	43833205	(39424236)	+	(GCG)n	Simple_repeat	1	102	(0)	1618679
20	27.4	1.2	3.5	chr17	43833206	43833289	(39424152)	+	G-rich	Low_complexity	1	85	(0)	1618680
23	16.1	4.5	2.9	chr17	43938408	43938473	(39318968)	+	GA-rich	Low_complexity	1	69	(0)	1618888
12	26.1	4.9	4.7	chr17	44087326	44087406	(39170035)	+	G-rich	Low_complexity	1	85	(0)	1619201
24	13.0	0.0	0.0	chr17	44087473	44087538	(39169903)	+	(TCC)n	Simple_repeat	1	66	(0)	1619202
39	24.9	1.0	0.0	chr17	44219550	44219649	(39037792)	+	(GCG)n	Simple_repeat	1	101	(0)	1619463
21	15.4	3.1	6.0	chr17	44219706	44219770	(39037671)	+	(CCG)n	Simple_repeat	1	67	(0)	1619464
20	20.1	0.0	5.2	chr17	44219770	44219827	(39037614)	+	GA-rich	Low_complexity	1	58	(0)	1619465
14	21.1	0.0	6.1	chr17	44219884	44219932	(39037509)	+	(CGCC)n	Simple_repeat	1	49	(0)	1619466
16	20.5	4.5	4.3	chr17	44221524	44221590	(39035851)	+	(CCTCCTG)n	Simple_repeat	1	70	(0)	1619468
14	18.7	0.0	5.0	chr17	44969324	44969363	(38288078)	+	(CTC)n	Simple_repeat	1	40	(0)	1621081
314	21.8	23.8	1.6	chr17	45021519	45021700	(38235741)	+	MIRc	SINE/MIR	2	236	(32)	1621192
13	17.2	4.9	2.3	chr17	45022143	45022183	(38235258)	+	(CCGG)n	Simple_repeat	1	43	(0)	1621193
1815	15.7	0.3	5.3	chr17	45129182	45129499	(38127942)	+	AluJo	SINE/Alu	11	312	(0)	1621406
218	32.4	0.9	9.0	chr17	45129500	45129554	(38127887)	+	MamRTE1	LINE/RTE-BovB	2458	2505	(1307)	1621404
428	29.5	8.5	4.3	chr17	45129555	45129706	(38127735)	+	MIRb	SINE/MIR	25	247	(21)	1621405
416	33.0	3.9	3.4	chr17	45131450	45131653	(38125788)	+	MIRb	SINE/MIR	24	228	(40)	1621408
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
53	15.0	4.5	0.0	chr17	45197575	45197685	(38059756)	+	GA-rich	Low_complexity	1	116	(0)	1621570
13	17.7	5.3	0.0	chr17	45396617	45396654	(37860787)	+	(CCCGCTC)n	Simple_repeat	1	40	(0)	1621964
13	3.8	6.9	3.2	chr17	45396804	45396850	(37860591)	+	(AGGCC)n	Simple_repeat	1	48	(0)	1621965
215	38.5	8.6	0.0	chr17	45596341	45596532	(37660909)	C	L2	LINE/L2	(1210)	2209	2000	1622364
905	12.4	0.0	0.0	chr17	45596587	45596707	(37660734)	C	AluSz6	SINE/Alu	(87)	225	105	1622365
1957	17.1	1.8	5.6	chr17	45596709	45596748	(37660693)	+	L1ME1	LINE/L1	5788	5826	(353)	1622366
970	19.9	19.7	6.1	chr17	45596749	45597043	(37660398)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	1622367
48	22.2	1.6	6.5	chr17	45784098	45784280	(37473161)	+	G-rich	Low_complexity	1	186	(0)	1622787
28	18.2	2.9	1.4	chr17	45784342	45784411	(37473030)	+	G-rich	Low_complexity	1	72	(0)	1622787
213	29.0	7.4	1.0	chr17	46841784	46841884	(36415557)	+	MIR3	SINE/MIR	78	185	(23)	1624821
303	21.9	1.7	0.4	chr17	46842133	46842226	(36415215)	+	MIR1_Amn	SINE/MIR	48	150	(80)	1624822
396	25.0	9.6	4.3	chr17	46889849	46889986	(36367455)	+	MIR	SINE/MIR	107	252	(10)	1624929
15	7.2	0.0	8.6	chr17	46890116	46890150	(36367291)	+	(CCT)n	Simple_repeat	1	35	(0)	1624930
19	20.3	3.5	1.7	chr17	46890151	46890171	(36367270)	+	(TCCCTCC)n	Simple_repeat	3	60	(0)	1624931
685	22.8	32.7	2.5	chr17	47423129	47423403	(35834038)	+	L1MC4	LINE/L1	7685	8042	(0)	1625944
45	21.2	1.6	4.7	chr17	47531632	47531790	(35725651)	+	G-rich	Low_complexity	1	154	(0)	1626216
12	16.5	0.0	0.0	chr17	47843631	47843657	(35413784)	+	(CCCAG)n	Simple_repeat	1	27	(0)	1626822
13	13.1	0.0	0.0	chr17	47896243	47896267	(35361174)	+	(CGG)n	Simple_repeat	1	25	(0)	1626911
13	0.0	0.0	4.8	chr17	49012642	49012662	(34244779)	+	(CCT)n	Simple_repeat	1	21	(0)	1629030
749	20.8	3.7	1.3	chr17	49012736	49012894	(34244547)	C	AluJb	SINE/Alu	(14)	298	136	1629031
185	33.5	10.9	1.9	chr17	49455790	49455947	(33801494)	+	MIR3	SINE/MIR	6	179	(29)	1629977
12	27.2	2.0	2.0	chr17	49496637	49496686	(33760755)	+	(CGCGC)n	Simple_repeat	1	51	(0)	1630054
12	31.4	4.5	0.0	chr17	49763533	49763599	(33493842)	+	(CCCTCAC)n	Simple_repeat	1	70	(0)	1630519
409	23.8	13.8	0.7	chr17	49907958	49908101	(33349340)	+	MIR3	SINE/MIR	18	183	(25)	1630798
296	27.6	5.8	4.5	chr17	49913465	49913665	(33343776)	C	MIRb	SINE/MIR	(20)	210	4	1630804
75	5.0	0.0	0.0	chr17	49913836	49913919	(33343522)	+	(GGA)n	Simple_repeat	1	84	(0)	1630805
326	26.0	14.4	0.7	chr17	50117149	50117269	(33140172)	+	L2b	LINE/L2	3238	3385	(2)	1631183
36	0.0	0.0	0.0	chr17	50128483	50128513	(33128928)	+	(CA)n	Simple_repeat	1	31	(0)	1631211
15	22.3	0.0	6.8	chr17	50149075	50149133	(33108308)	+	(GGCGG)n	Simple_repeat	1	59	(0)	1631234
15	21.8	0.0	0.0	chr17	50149248	50149284	(33108157)	+	(CTC)n	Simple_repeat	1	37	(0)	1631235
16	7.2	3.2	3.1	chr17	50149728	50149758	(33107683)	+	(CGG)n	Simple_repeat	1	32	(0)	1631236
13	22.1	2.3	2.2	chr17	50478731	50478775	(32778666)	+	G-rich	Low_complexity	1	45	(0)	1631863
17	14.0	0.0	0.0	chr17	50479052	50479083	(32778358)	+	(GTGGCC)n	Simple_repeat	1	32	(0)	1631864
189	29.7	8.4	15.6	chr17	50547442	50547788	(32709653)	+	L2c	LINE/L2	3056	3387	(0)	1632014
2166	7.5	0.3	0.0	chr17	50718768	50719075	(32538366)	C	AluSp	SINE/Alu	(0)	313	1	1632314
14	17.1	1.6	9.4	chr17	50866466	50866528	(32390913)	+	(CCCCGG)n	Simple_repeat	1	64	(0)	1632611
707	26.7	13.0	1.4	chr17	50940258	50940862	(32316579)	+	L2a	LINE/L2	2559	3274	(152)	1632781
12	21.0	5.9	1.9	chr17	51166774	51166824	(32090617)	+	(CGCGCC)n	Simple_repeat	1	54	(0)	1633282
397	28.2	0.6	4.9	chr17	51371570	51371618	(31885823)	+	HAL1b	LINE/L1	2358	2402	(19)	1633647
14	22.5	1.8	5.2	chr17	51373759	51373815	(31883626)	+	(TTTACA)n	Simple_repeat	1	58	(0)	1633652
481	11.8	5.1	2.1	chr17	51374187	51374281	(31883160)	+	MER53	DNA/hAT	9	106	(87)	1633653
13	25.2	2.7	6.5	chr17	55421817	55421891	(27835550)	+	(GGTCG)n	Simple_repeat	1	77	(0)	1639592
3603	5.2	4.5	0.5	chr17	55473790	55474233	(27783208)	+	LTR2	LTR/ERV1	1	463	(0)	1639700
7105	6.5	0.1	0.0	chr17	55474234	55475092	(27782349)	+	HERVE_a-int	LTR/ERV1	1	860	(6987)	1639700
30	26.3	1.1	1.7	chr17	57256433	57256521	(26000920)	+	G-rich	Low_complexity	1	88	(0)	1642979
15	22.2	4.3	0.0	chr17	57256609	57256655	(26000786)	+	GA-rich	Low_complexity	1	49	(0)	1642980
275	37.0	5.2	2.1	chr17	57662728	57662915	(25594526)	C	Tigger19a	DNA/TcMar-Tigger	(60)	263	70	1643618
11	27.7	0.0	0.0	chr17	57870084	57870122	(25387319)	+	(CACCTC)n	Simple_repeat	1	39	(0)	1644009
193	40.3	0.0	0.0	chr17	57870409	57870485	(25386956)	+	L2a	LINE/L2	3350	3426	(0)	1644010
12	18.1	0.0	3.0	chr17	58047015	58047047	(25210394)	+	(CTCCCC)n	Simple_repeat	1	33	(0)	1644346
232	26.3	0.8	9.2	chr17	58047061	58047190	(25210251)	C	L2b	LINE/L2	(1)	3374	3256	1644347
246	20.8	0.0	0.0	chr17	58284645	58284692	(24972749)	C	Tigger19b	DNA/TcMar-Tigger	(372)	178	131	1644770
24	10.5	2.4	0.0	chr17	60525931	60525971	(22731470)	+	(TCC)n	Simple_repeat	1	42	(0)	1649441
28	22.5	1.5	8.2	chr17	62627530	62627662	(20629779)	+	(CCCCCT)n	Simple_repeat	1	135	(0)	1653391
15	5.6	0.0	0.0	chr17	62628029	62628047	(20629394)	+	(GT)n	Simple_repeat	1	19	(0)	1653392
1804	17.4	0.3	0.7	chr17	62725266	62725563	(20531878)	C	AluJb	SINE/Alu	(14)	298	2	1653580
2067	14.1	3.2	0.0	chr17	64095157	64095454	(19161987)	+	AluSz6	SINE/Alu	1	308	(4)	1655897
222	32.4	12.5	8.0	chr17	64095809	64096088	(19161353)	+	L2c	LINE/L2	3030	3335	(52)	1655898
1100	24.4	8.0	2.2	chr17	64777923	64778240	(18479201)	C	MER46C	DNA/TcMar-Tigger	(0)	338	1	1657313
15	14.5	5.3	0.0	chr17	64778655	64778692	(18478749)	+	(GCTGC)n	Simple_repeat	1	40	(0)	1657314
50	23.1	0.8	0.8	chr17	65100533	65100655	(18156786)	+	(TCC)n	Simple_repeat	1	124	(0)	1657971
19	42.3	1.3	4.0	chr17	65516664	65516887	(17740554)	+	G-rich	Low_complexity	1	227	(0)	1658834
264	30.6	4.6	0.0	chr17	65517074	65517197	(17740244)	+	L2c	LINE/L2	3018	3147	(240)	1658835
594	18.0	0.0	0.9	chr17	65696695	65696806	(17560635)	+	L1MC5a	LINE/L1	2662	2772	(5)	1659144
240	8.6	0.0	0.0	chr17	65697057	65697091	(17560350)	C	L1ME1	LINE/L1	(15)	6164	6130	1659145
30	30.3	3.4	2.6	chr17	66302124	66302272	(16955169)	+	GA-rich	Low_complexity	1	154	(0)	1660070
50	0.0	0.0	0.0	chr17	66302333	66302377	(16955064)	+	(GCC)n	Simple_repeat	1	45	(0)	1660071
307	28.3	5.0	0.9	chr17	66565067	66565180	(16692261)	+	MIRb	SINE/MIR	58	176	(92)	1660468
2672	18.2	3.5	1.8	chr17	66730256	66730807	(16526634)	C	MER41B	LTR/ERV1	(38)	596	75	1660716
2317	6.9	2.9	2.3	chr17	66731069	66731373	(16526068)	+	AluSq	SINE/Alu	1	307	(6)	1660717
467	32.4	6.8	0.0	chr17	66968021	66968224	(16289217)	C	MIRb	SINE/MIR	(46)	222	4	1661146
518	27.6	2.5	0.6	chr17	66976148	66976321	(16281120)	+	MIRc	SINE/MIR	2	175	(93)	1661160
72	27.7	4.0	2.2	chr17	66976322	66976622	(16280819)	+	(CTCC)n	Simple_repeat	1	313	(0)	1661161
210	30.0	1.4	0.0	chr17	66976650	66976719	(16280722)	+	MIRc	SINE/MIR	159	229	(39)	1661160
17	28.0	1.4	4.0	chr17	67377442	67377515	(15879926)	+	(GGC)n	Simple_repeat	1	75	(0)	1661911
14	28.1	3.0	1.5	chr17	67378017	67378082	(15879359)	+	(GCGCGCC)n	Simple_repeat	1	68	(0)	1661912
20	13.2	5.6	3.5	chr17	67825998	67826051	(15431390)	+	(CGG)n	Simple_repeat	1	57	(0)	1662902
36	31.8	0.0	0.8	chr17	67826114	67826239	(15431202)	+	GA-rich	Low_complexity	1	126	(0)	1662903
19	29.0	5.4	0.0	chr17	68600998	68601089	(14656352)	+	(GGCCGCC)n	Simple_repeat	1	97	(0)	1664475
46	18.2	7.5	1.9	chr17	72150962	72151009	(11106432)	+	GA-rich	Low_complexity	1	152	(0)	1669883
33	21.6	1.1	3.2	chr17	72151010	72151102	(11106339)	+	G-rich	Low_complexity	1	94	(0)	1669884
1497	28.8	12.9	2.0	chr17	72885875	72886728	(10370713)	+	L2a	LINE/L2	1940	2900	(519)	1671182
623	28.3	7.0	11.4	chr17	72886753	72887215	(10370226)	+	L2a	LINE/L2	2986	3426	(0)	1671182
189	33.9	0.0	0.0	chr17	73361555	73361613	(9895828)	+	L2b	LINE/L2	3278	3336	(39)	1672156
38	3.9	3.6	1.8	chr17	73534047	73534101	(9723340)	+	(CTC)n	Simple_repeat	1	57	(0)	1672502
224	27.6	13.4	4.9	chr17	73534108	73534229	(9723212)	+	L2a	LINE/L2	3293	3426	(0)	1672503
42	26.5	4.3	3.6	chr17	73743689	73743872	(9513569)	+	(CTCCCT)n	Simple_repeat	1	192	(0)	1672877
230	28.7	12.6	0.6	chr17	74145736	74145903	(9111538)	C	LTR33	LTR/ERVL	(8)	507	317	1673568
590	22.0	11.0	0.0	chr17	74145939	74146124	(9111317)	C	LTR33	LTR/ERVL	(306)	209	1	1673568
472	28.5	7.8	8.3	chr17	74146164	74146381	(9111060)	+	L2a	LINE/L2	3208	3424	(2)	1673567
18	14.9	0.0	7.7	chr17	74203455	74203506	(9053935)	+	GA-rich	Low_complexity	1	52	(0)	1673684
934	13.6	2.8	0.0	chr17	74657747	74657886	(8599555)	+	FRAM	SINE/Alu	22	165	(11)	1674565
2476	9.0	0.0	0.3	chr17	74657962	74658271	(8599170)	C	AluSx1	SINE/Alu	(2)	310	2	1674566
13	16.8	0.0	5.4	chr17	74745088	74745124	(8512317)	+	G-rich	Low_complexity	1	37	(0)	1674747
30	0.0	0.0	0.0	chr17	74745261	74745289	(8512152)	+	(CCCAG)n	Simple_repeat	1	29	(0)	1674748
301	21.0	3.1	0.0	chr17	74770636	74770697	(8486744)	+	MIR1_Amn	SINE/MIR	85	148	(82)	1674784
15	20.2	0.0	6.7	chr17	74852344	74852388	(8405053)	+	(CG)n	Simple_repeat	1	45	(0)	1674875
11	21.2	2.5	2.4	chr17	74852554	74852593	(8404848)	+	(GCAGCT)n	Simple_repeat	1	41	(0)	1674876
12	8.1	3.6	3.5	chr17	74852615	74852642	(8404799)	+	G-rich	Low_complexity	1	29	(0)	1674877
17	11.1	0.0	0.0	chr17	75615733	75615761	(7641680)	+	(AGC)n	Simple_repeat	1	29	(0)	1676476
12	0.0	5.3	0.0	chr17	75721047	75721065	(7536376)	+	(GCA)n	Simple_repeat	1	20	(0)	1676646
13	21.7	0.0	2.6	chr17	75721317	75721355	(7536086)	+	(CGGCCC)n	Simple_repeat	1	39	(0)	1676647
521	27.6	2.9	0.7	chr17	75764441	75764613	(7492828)	+	MIR3	SINE/MIR	12	186	(22)	1676724
16	9.1	5.4	2.6	chr17	75765228	75765264	(7492177)	+	(CCCGC)n	Simple_repeat	1	39	(0)	1676725
1273	24.7	7.5	11.8	chr17	75833180	75833712	(7423729)	+	L2a	LINE/L2	2919	3426	(0)	1676853
15	16.0	4.5	2.2	chr17	76382892	76382935	(6874506)	+	GA-rich	Low_complexity	1	46	(0)	1677950
496	29.7	18.6	4.0	chr17	76519378	76519773	(6737668)	+	L2	LINE/L2	2151	2617	(802)	1678196
12	23.7	2.5	0.0	chr17	76540905	76540944	(6716497)	+	(TCCCCT)n	Simple_repeat	1	41	(0)	1678238
303	26.6	2.8	12.6	chr17	76667978	76668136	(6589305)	+	LTR16A	LTR/ERVL	3	145	(306)	1678516
461	28.0	3.6	2.6	chr17	76668129	76668319	(6589122)	+	LTR16A	LTR/ERVL	258	450	(1)	1678516
2113	11.5	3.3	0.3	chr17	76668369	76668663	(6588778)	+	AluSz	SINE/Alu	2	305	(7)	1678517
180	21.7	4.2	0.0	chr17	76735927	76735972	(6521469)	C	MIR1_Amn	SINE/MIR	(28)	202	155	1678634
21	33.7	2.4	2.3	chr17	76736257	76736383	(6521058)	+	G-rich	Low_complexity	1	130	(0)	1678635
235	33.7	3.8	1.0	chr17	76909822	76909923	(6347518)	+	UCON132b	DNA/hAT-Tip100	1	105	(43)	1679019
722	25.1	5.6	4.9	chr17	77266546	77266792	(5990649)	C	MER103C	DNA/hAT-Charlie	(4)	293	45	1679753
334	20.6	0.0	0.0	chr17	77322611	77322678	(5934763)	+	MIR3	SINE/MIR	81	148	(60)	1679879
1848	15.8	14.1	1.4	chr17	77459976	77460153	(5797288)	C	MSTB	LTR/ERVL-MaLR	(228)	198	1	1680075
304	23.6	6.3	0.5	chr17	78226250	78226363	(5031078)	C	L1MD2	LINE/L1	(13)	6346	6257	1681450
233	31.9	9.4	7.1	chr17	78226607	78226936	(5030505)	C	L2a	LINE/L2	(0)	3426	3043	1681451
1024	4.7	7.2	0.0	chr17	78254012	78254140	(5003301)	C	MER85	DNA/PiggyBac	(0)	139	1	1681497
221	36.7	5.8	0.0	chr17	78351958	78352055	(4905386)	C	MER5A	DNA/hAT-Charlie	(26)	163	60	1681712
20	26.2	4.4	4.2	chr17	78353008	78353058	(4904383)	+	(GCGGCC)n	Simple_repeat	23	118	(0)	1681715
14	14.2	3.2	0.0	chr17	78353182	78353212	(4904229)	+	(CGCC)n	Simple_repeat	1	32	(0)	1681717
489	15.5	3.5	0.0	chr17	78356068	78356151	(4901290)	+	FLAM_A	SINE/Alu	44	130	(12)	1681723
1906	13.6	4.4	0.3	chr17	79294313	79294598	(3962843)	C	AluSx1	SINE/Alu	(13)	299	2	1683246
144	20.8	3.5	1.6	chr17	79296660	79297026	(3960415)	+	(CCT)n	Simple_repeat	1	380	(0)	1683248
771	24.4	16.5	2.1	chr17	79366793	79367164	(3890277)	+	LTR16	LTR/ERVL	3	438	(0)	1683339
97	19.2	2.7	1.3	chr17	79367176	79367398	(3890043)	+	(CCT)n	Simple_repeat	1	229	(0)	1683340
863	28.4	2.8	3.4	chr17	79528516	79528839	(3728602)	+	MLT1C	LTR/ERVL-MaLR	49	370	(97)	1683540
212	27.0	8.2	5.3	chr17	79528888	79528981	(3728460)	+	L2b	LINE/L2	3274	3370	(5)	1683541
13	23.2	0.0	5.9	chr17	79610621	79610671	(3646770)	+	(GACCCC)n	Simple_repeat	1	51	(0)	1683648
189	15.0	3.0	1.1	chr17	79702834	79703202	(3554239)	+	(CCT)n	Simple_repeat	1	380	(0)	1683781
21	6.3	2.9	0.0	chr17	79742009	79742042	(3515399)	+	(CCCCTG)n	Simple_repeat	1	35	(0)	1683854
2039	9.4	0.0	0.0	chr17	79745971	79746226	(3511215)	+	AluSq2	SINE/Alu	58	313	(0)	1683863
23	8.0	2.4	0.0	chr17	79746227	79746264	(3511177)	+	(AGAAA)n	Simple_repeat	3	41	(0)	1683864
22	21.5	0.0	0.0	chr17	79746414	79746462	(3510979)	+	(CCT)n	Simple_repeat	1	49	(0)	1683865
14	11.3	3.5	0.0	chr17	79778317	79778345	(3479096)	+	(GCCC)n	Simple_repeat	1	30	(0)	1683938
15	12.7	0.0	5.3	chr17	79778346	79778351	(3479090)	+	(GCCGCCC)n	Simple_repeat	4	38	(0)	1683939
32	28.6	0.8	3.2	chr17	79839588	79839712	(3417729)	+	G-rich	Low_complexity	1	126	(0)	1684014
12	8.2	0.0	9.4	chr17	79844190	79844221	(3413220)	+	(CTGGC)n	Simple_repeat	1	32	(0)	1684018
455	23.4	8.7	0.0	chr17	79849822	79849958	(3407483)	C	MER45A	DNA/hAT-Tip100	(28)	150	1	1684026
95	21.4	1.6	3.5	chr17	80064999	80065251	(3192190)	+	(TCCTCC)n	Simple_repeat	1	257	(0)	1684402
1520	10.6	10.2	6.6	chr17	80147777	80148049	(3109392)	C	AluJb	SINE/Alu	(27)	285	2	1684530
1204	17.2	18.3	4.4	chr17	80160436	80160954	(3096487)	C	LTR36	LTR/ERV1	(12)	599	6	1684561
1657	23.8	8.8	3.8	chr17	80160979	80161041	(3096400)	C	LTR49-int	LTR/ERV1	(3985)	2346	2287	1684552
1380	23.9	10.8	6.9	chr17	80161042	80161432	(3096009)	C	MER66D	LTR/ERV1	(0)	484	80	1684562
39	20.0	1.2	0.0	chr17	80205225	80205307	(3052134)	+	(TCCC)n	Simple_repeat	1	84	(0)	1684661
837	12.2	0.9	0.0	chr17	80441002	80441116	(2816325)	+	AluJo	SINE/Alu	3	118	(194)	1685019
14	13.3	7.0	2.2	chr17	80493234	80493276	(2764165)	+	GA-rich	Low_complexity	1	46	(0)	1685092
251	27.6	10.3	0.9	chr17	80816935	80817053	(2440388)	+	MIRc	SINE/MIR	54	186	(82)	1685569
16	10.2	0.0	7.9	chr17	81392293	81392330	(1865111)	+	GA-rich	Low_complexity	1	38	(0)	1686224
2384	7.3	2.9	0.0	chr17	81817175	81817476	(1439965)	+	AluY	SINE/Alu	1	311	(0)	1686766
231	29.7	6.7	3.5	chr17	81817780	81817894	(1439547)	+	L2	LINE/L2	2309	2427	(992)	1686767
19	20.2	5.9	0.0	chr17	81860579	81860629	(1396812)	+	(GC)n	Simple_repeat	1	54	(0)	1686834
1997	19.2	3.7	8.2	chr17	82174354	82174999	(1082442)	+	LTR6A	LTR/ERV1	1	564	(0)	1687269
224	28.8	8.0	1.1	chr17	82310146	82310298	(947143)	C	L2c	LINE/L2	(45)	3342	3178	1687467
13	4.1	8.0	0.0	chr17	82310381	82310405	(947036)	+	(GGA)n	Simple_repeat	1	27	(0)	1687468
986	8.1	0.0	0.0	chr18	158118	158240	(80215045)	C	AluJb	SINE/Alu	(12)	300	178	1689318
22	24.0	2.6	2.5	chr18	158379	158406	(80214879)	+	(CCCT)n	Simple_repeat	1	77	(0)	1689319
13	19.1	0.0	6.4	chr18	158407	158453	(80214832)	+	(CCCTCCA)n	Simple_repeat	1	47	(0)	1689320
26	27.5	3.3	3.2	chr18	158579	158698	(80214587)	+	(GCC)n	Simple_repeat	1	124	(0)	1689321
14	12.6	0.0	7.5	chr18	3448257	3448296	(76924989)	+	(CCTCCTC)n	Simple_repeat	1	40	(0)	1694436
19	0.0	0.0	0.0	chr18	3448718	3448738	(76924547)	+	(T)n	Simple_repeat	1	21	(0)	1694437
13	28.8	0.0	2.1	chr18	3452651	3452698	(76920587)	+	(TCC)n	Simple_repeat	1	48	(0)	1694441
2490	7.5	0.3	0.0	chr18	3453405	3453711	(76919574)	+	AluSp	SINE/Alu	1	308	(5)	1694443
17	12.2	4.0	5.8	chr18	5197130	5197179	(75176106)	+	(GGCG)n	Simple_repeat	1	52	(0)	1696918
16	17.8	7.2	4.0	chr18	12408288	12408356	(67964929)	+	(GCCGG)n	Simple_repeat	1	74	(0)	1707390
10921	9.6	0.6	7.5	chr18	12775722	12777416	(67595869)	C	LTR12C	LTR/ERV1	(0)	1579	3	1708112
17	0.0	0.0	0.0	chr18	12883871	12883889	(67489396)	+	(T)n	Simple_repeat	1	19	(0)	1708292
18	9.4	0.0	5.3	chr18	12883964	12884001	(67489284)	+	(GCGAGAG)n	Simple_repeat	1	38	(0)	1708293
16	15.8	2.2	4.3	chr18	13611744	13611789	(66761496)	+	GA-rich	Low_complexity	1	47	(0)	1709292
15	29.2	2.7	2.6	chr18	23135480	23135553	(57237732)	+	(AGCC)n	Simple_repeat	1	76	(0)	1715683
810	20.6	4.8	1.0	chr18	23205868	23206101	(57167184)	+	MLT1C	LTR/ERVL-MaLR	174	472	(33)	1715799
13	9.3	0.0	0.0	chr18	23206133	23206155	(57167130)	+	(GCCT)n	Simple_repeat	1	23	(0)	1715801
14	25.4	1.9	1.9	chr18	23503490	23503542	(56869743)	+	(AGCCGC)n	Simple_repeat	1	54	(0)	1716343
15	20.0	3.6	3.5	chr18	24014646	24014700	(56358585)	+	(CCGCGG)n	Simple_repeat	1	57	(0)	1717217
26	0.0	0.0	0.0	chr18	24014742	24014766	(56358519)	+	(CTCCC)n	Simple_repeat	1	25	(0)	1717218
13	4.7	4.5	0.0	chr18	24271698	24271719	(56101566)	+	(CCT)n	Simple_repeat	1	23	(0)	1717613
13	20.6	4.9	4.7	chr18	24426651	24426711	(55946574)	+	(CCGCG)n	Simple_repeat	1	64	(0)	1717929
683	22.5	0.0	0.0	chr18	24726015	24726152	(55647133)	+	LTR90B	LTR	644	781	(15)	1718387
37	25.6	0.9	1.8	chr18	25351813	25351922	(55021363)	+	(GGC)n	Simple_repeat	1	111	(0)	1719215
27	10.9	2.0	1.9	chr18	25351924	25351974	(55021311)	+	(GAG)n	Simple_repeat	1	52	(0)	1719216
895	23.2	17.9	1.9	chr18	25851917	25852290	(54520995)	C	LTR16A1	LTR/ERVL	(0)	456	10	1719903
35	6.7	3.0	2.9	chr18	26548249	26548314	(53824971)	+	(CTC)n	Simple_repeat	1	68	(0)	1721097
23	6.3	0.0	0.0	chr18	26548342	26548374	(53824911)	+	(CTC)n	Simple_repeat	1	33	(0)	1721097
15	17.5	0.0	0.0	chr18	26863449	26863480	(53509805)	+	(CCCG)n	Simple_repeat	1	32	(0)	1721618
41	8.7	0.0	1.6	chr18	26909759	26909821	(53463464)	+	(GGA)n	Simple_repeat	1	63	(0)	1721681
26	24.3	0.7	8.7	chr18	31498127	31498195	(48875090)	+	G-rich	Low_complexity	1	105	(33)	1727744
17	9.6	8.3	3.9	chr18	31498196	31498243	(48875042)	+	(CGG)n	Simple_repeat	1	52	(0)	1727745
26	24.3	0.7	8.7	chr18	31498244	31498263	(48875022)	+	G-rich	Low_complexity	106	138	(0)	1727744
49	0.0	0.0	0.0	chr18	32093106	32093150	(48280135)	+	(CTCCCGCT)n	Simple_repeat	1	45	(0)	1728828
12	18.1	2.4	4.8	chr18	36828617	36828657	(43544628)	+	(CCT)n	Simple_repeat	1	42	(0)	1735268
15	15.8	0.0	3.3	chr18	37487433	37487462	(42885823)	+	(TC)n	Simple_repeat	1	30	(0)	1736114
14	10.8	3.1	3.0	chr18	37487457	37487513	(42885772)	+	(CTC)n	Simple_repeat	1	57	(0)	1736115
30	6.2	3.9	1.9	chr18	37487735	37487786	(42885499)	+	(GAG)n	Simple_repeat	1	54	(0)	1736116
270	31.1	14.2	0.0	chr18	46360415	46360517	(34012768)	+	Tigger16a	DNA/TcMar-Tigger	821	940	(17)	1748513
1035	26.2	2.6	3.9	chr18	48020224	48020642	(32352643)	C	MER115	DNA/hAT-Tip100	(3)	690	213	1751186
259	29.2	6.5	5.8	chr18	48031512	48031557	(32341728)	C	MIR3	SINE/MIR	(10)	198	153	1751200
293	28.1	1.1	3.3	chr18	48605792	48605883	(31767402)	C	L2c	LINE/L2	(20)	3367	3278	1752186
195	26.3	9.5	5.8	chr18	48942000	48942120	(31431165)	C	L3	LINE/CR1	(17)	4082	3957	1752703
333	34.3	5.2	2.9	chr18	49561277	49561483	(30811802)	C	MIRb	SINE/MIR	(22)	246	35	1753802
13	30.1	0.0	0.0	chr18	49562966	49563011	(30810274)	+	(CTCCCC)n	Simple_repeat	1	46	(0)	1753803
246	22.5	15.5	0.0	chr18	49563292	49563362	(30809923)	+	MIR3	SINE/MIR	60	143	(65)	1753804
23	22.3	0.0	1.7	chr18	50281424	50281482	(30091803)	+	(CCT)n	Simple_repeat	1	59	(0)	1754897
20	10.1	0.0	0.0	chr18	51196765	51196796	(29176489)	+	(CCG)n	Simple_repeat	1	32	(0)	1756515
35	27.0	0.9	0.9	chr18	51196911	51197018	(29176267)	+	(TCCTCC)n	Simple_repeat	1	109	(0)	1756516
36	2.9	0.0	0.0	chr18	52342267	52342301	(28030984)	+	(GT)n	Simple_repeat	1	35	(0)	1758317
13	13.1	0.0	0.0	chr18	52342359	52342383	(28030902)	+	(CTCC)n	Simple_repeat	1	25	(0)	1758318
30	5.3	0.0	0.0	chr18	55586114	55586153	(24787132)	+	(GAG)n	Simple_repeat	1	40	(0)	1762864
87	0.0	0.0	0.0	chr18	55586154	55586229	(24787056)	+	(AGC)n	Simple_repeat	1	76	(0)	1762865
629	21.8	12.1	6.5	chr18	57906830	57907015	(22466270)	C	LTR16B1	LTR/ERVL	(1)	479	282	1766438
266	30.8	4.0	7.7	chr18	57907062	57907216	(22466069)	C	LTR16B1	LTR/ERVL	(317)	163	15	1766438
15	28.2	0.0	7.2	chr18	58671867	58671949	(21701336)	+	(GCGG)n	Simple_repeat	1	83	(0)	1767639
11	26.0	0.0	5.8	chr18	62526814	62526865	(17846420)	+	(CGGCCC)n	Simple_repeat	1	52	(0)	1773603
1732	18.1	2.9	0.7	chr18	66669170	66669468	(13703817)	+	AluSz	SINE/Alu	7	312	(0)	1779437
56	24.4	3.7	2.5	chr18	67955520	67955709	(12417576)	+	GA-rich	Low_complexity	1	197	(0)	1781124
20	14.9	0.0	6.0	chr18	70288985	70289034	(10084251)	+	GA-rich	Low_complexity	1	50	(0)	1784348
1184	17.5	8.6	0.8	chr18	71303937	71304172	(9069113)	+	MSTA	LTR/ERVL-MaLR	171	426	(2)	1785752
37	0.0	0.0	0.0	chr18	74657902	74657935	(5715350)	+	(TTC)n	Simple_repeat	1	34	(0)	1790176
47	14.4	3.3	4.8	chr18	77098904	77099030	(3274255)	+	(CCT)n	Simple_repeat	1	125	(0)	1793053
17	10.1	3.1	0.0	chr18	77133085	77133116	(3240169)	+	(CCGACC)n	Simple_repeat	1	33	(0)	1793103
32	0.0	0.0	0.0	chr18	77133320	77133349	(3239936)	+	(CTGGGAG)n	Simple_repeat	1	30	(0)	1793104
183	28.8	3.3	0.0	chr18	78947391	78947449	(1425836)	C	L2c	LINE/L2	(27)	3360	3300	1795017
15	3.5	6.5	3.0	chr18	79394391	79394421	(978864)	+	(GGAGGG)n	Simple_repeat	1	33	(0)	1795469
443	23.9	16.8	0.5	chr18	79730753	79730941	(642344)	+	MLT1D	LTR/ERVL-MaLR	274	499	(6)	1795726
1616	21.4	14.7	7.5	chr18	79916325	79916935	(456350)	+	MER21A	LTR/ERVL	55	716	(215)	1795893
12	16.3	7.0	2.2	chr18	79988584	79988626	(384659)	+	(CGTG)n	Simple_repeat	1	46	(0)	1795993
32	0.0	0.0	0.0	chr19	267223	267252	(58350364)	+	(CGCTG)n	Simple_repeat	1	30	(0)	1796658
2366	7.3	2.3	0.0	chr19	267692	267992	(58349624)	+	AluSp	SINE/Alu	3	310	(3)	1796659
662	19.5	9.4	0.0	chr19	295441	295594	(58322022)	+	MER53	DNA/hAT	24	193	(0)	1796702
28	23.0	6.9	4.1	chr19	489272	489430	(58128186)	+	(CCCCGAC)n	Simple_repeat	1	170	(0)	1797014
229	21.4	4.5	10.6	chr19	489656	489749	(58127867)	C	MER20	DNA/hAT-Charlie	(129)	90	3	1797015
2431	7.0	0.0	1.3	chr19	771058	771372	(57846244)	+	AluY	SINE/Alu	1	311	(0)	1797566
317	29.8	5.3	0.9	chr19	771406	771622	(57845994)	+	L2	LINE/L2	2783	3009	(410)	1797567
376	23.5	3.0	7.0	chr19	772101	772347	(57845269)	+	L2a	LINE/L2	2925	3144	(282)	1797568
669	18.1	0.0	0.0	chr19	772374	772505	(57845111)	+	FLAM_C	SINE/Alu	1	221	(81)	1797569
2344	8.1	0.3	1.0	chr19	831079	831376	(57786240)	C	AluSg	SINE/Alu	(13)	297	2	1797693
50	17.1	0.0	0.0	chr19	932430	932521	(57685095)	+	GA-rich	Low_complexity	1	92	(0)	1797916
12	28.7	0.0	0.0	chr19	1065287	1065328	(57552288)	+	(CAAGGA)n	Simple_repeat	1	42	(0)	1798164
44	4.2	0.0	0.0	chr19	1164504	1164552	(57453064)	+	(AGG)n	Simple_repeat	1	49	(0)	1798306
217	15.1	0.5	1.3	chr19	1164604	1164993	(57452623)	+	GA-rich	Low_complexity	1	392	(0)	1798307
145	29.9	4.6	2.5	chr19	1282063	1282763	(57334853)	+	GA-rich	Low_complexity	1	733	(0)	1798496
13	25.2	0.0	2.3	chr19	1283032	1283075	(57334541)	+	(CCCGTGC)n	Simple_repeat	1	44	(0)	1798497
12	11.6	3.3	3.2	chr19	1451945	1451974	(57165642)	+	GA-rich	Low_complexity	1	31	(0)	1798804
13	21.4	3.8	3.6	chr19	1567344	1567396	(57050220)	+	G-rich	Low_complexity	1	55	(0)	1799037
280	19.0	1.7	1.7	chr19	1744882	1744940	(56872676)	C	MIRb	SINE/MIR	(96)	172	114	1799445
180	25.9	12.9	0.0	chr19	1746425	1746478	(56871138)	C	MIR3	SINE/MIR	(37)	171	110	1799447
180	24.6	5.0	1.7	chr19	1747689	1747746	(56869870)	C	L2b	LINE/L2	(0)	3375	3316	1799451
249	21.0	3.6	8.0	chr19	1747795	1747882	(56869734)	+	L2c	LINE/L2	3066	3149	(238)	1799452
35	30.5	2.5	3.1	chr19	1826378	1826536	(56791080)	+	G-rich	Low_complexity	1	163	(0)	1799583
31	3.1	0.0	0.0	chr19	1827016	1827048	(56790568)	+	(GGA)n	Simple_repeat	1	33	(0)	1799584
16	18.3	2.2	2.2	chr19	1827116	1827160	(56790456)	+	(AGGCTG)n	Simple_repeat	1	46	(0)	1799585
19	28.8	1.4	1.4	chr19	2015425	2015494	(56602122)	+	(CGC)n	Simple_repeat	1	71	(0)	1799946
43	0.0	0.0	0.0	chr19	2015542	2015580	(56602036)	+	(GGC)n	Simple_repeat	1	39	(0)	1799947
13	19.6	0.0	0.0	chr19	2052444	2052473	(56565143)	+	(TGTG)n	Simple_repeat	1	30	(0)	1800037
729	24.7	8.3	1.0	chr19	2124097	2124407	(56493209)	+	MER68	LTR/ERVL	125	460	(103)	1800173
1822	13.6	4.6	1.0	chr19	2237136	2237429	(56380187)	+	AluJr	SINE/Alu	1	305	(7)	1800384
13	21.2	1.8	7.0	chr19	2269498	2269553	(56348063)	+	(GGC)n	Simple_repeat	1	57	(0)	1800444
13	17.7	3.1	0.0	chr19	2328712	2328743	(56288873)	+	(GGC)n	Simple_repeat	1	33	(0)	1800571
732	18.6	1.8	1.8	chr19	2740424	2740587	(55877029)	+	L1MA8	LINE/L1	6029	6192	(99)	1801562
842	27.7	15.1	4.2	chr19	2983201	2983942	(55633674)	C	L2a	LINE/L2	(2)	3424	2570	1802087
208	14.6	0.0	0.0	chr19	3041845	3041885	(55575731)	C	MIR3	SINE/MIR	(87)	121	81	1802243
13	20.4	0.0	4.7	chr19	3046720	3046762	(55570854)	+	G-rich	Low_complexity	1	43	(0)	1802257
2216	13.5	0.0	0.0	chr19	3647666	3647976	(54969640)	+	AluSx	SINE/Alu	2	312	(0)	1803704
36	13.2	0.0	0.0	chr19	3697428	3697502	(54920114)	+	(GGACCGAGCT)n	Simple_repeat	1	75	(0)	1803804
18	30.6	3.9	1.9	chr19	3868848	3868950	(54748666)	+	(GGCTGG)n	Simple_repeat	1	107	(0)	1804194
22	27.1	1.1	4.2	chr19	3869029	3869056	(54748560)	+	(CCCCGCG)n	Simple_repeat	1	75	(21)	1804195
13	26.1	4.9	1.6	chr19	3869057	3869117	(54748499)	+	(CCCGC)n	Simple_repeat	1	64	(0)	1804196
22	27.1	1.1	4.2	chr19	3869118	3869123	(54748493)	+	(CCCCGCG)n	Simple_repeat	76	96	(0)	1804195
43	15.4	2.7	4.4	chr19	3933304	3933414	(54684202)	+	GA-rich	Low_complexity	1	114	(0)	1804375
20	14.6	2.0	4.0	chr19	3951054	3951102	(54666514)	+	(CCT)n	Simple_repeat	1	50	(0)	1804419
1382	12.2	0.0	6.3	chr19	3969138	3969359	(54648257)	C	AluJr	SINE/Alu	(17)	295	88	1804456
204	33.3	0.0	4.2	chr19	3969490	3969561	(54648055)	C	MIRb	SINE/MIR	(195)	73	5	1804457
226	20.9	3.1	3.5	chr19	4145112	4145754	(54471862)	+	GA-rich	Low_complexity	1	663	(0)	1804864
2130	9.0	6.2	0.0	chr19	4146060	4146347	(54471269)	C	AluSx	SINE/Alu	(5)	307	1	1804865
2347	6.7	0.0	1.0	chr19	4311400	4311697	(54305919)	+	AluSz	SINE/Alu	1	295	(17)	1805339
448	25.6	20.9	3.9	chr19	4583697	4583980	(54033636)	C	L2b	LINE/L2	(6)	3369	3025	1805925
14	16.3	1.8	8.6	chr19	4760056	4760112	(53857504)	+	G-rich	Low_complexity	1	58	(0)	1806381
15	15.8	7.8	1.8	chr19	4909661	4909711	(53707905)	+	G-rich	Low_complexity	1	55	(0)	1806852
18	27.3	0.0	3.1	chr19	5340835	5340899	(53276717)	+	(CCG)n	Simple_repeat	1	65	(0)	1807706
19	21.2	0.0	0.0	chr19	5341053	5341096	(53276520)	+	(GGC)n	Simple_repeat	1	44	(0)	1807707
583	28.6	21.0	0.3	chr19	5536013	5536321	(53081295)	C	L2b	LINE/L2	(1)	3374	2985	1808287
181	33.3	3.6	3.6	chr19	5536365	5536448	(53081168)	C	L2b	LINE/L2	(537)	2882	2799	1808287
13	11.2	3.2	3.1	chr19	5804091	5804121	(52813495)	+	(CAGCC)n	Simple_repeat	1	32	(0)	1808887
204	34.3	6.2	1.9	chr19	5892844	5892950	(52724666)	C	MIR	SINE/MIR	(113)	149	38	1809085
28	0.0	0.0	0.0	chr19	6279885	6279910	(52337706)	+	(CGC)n	Simple_repeat	1	26	(0)	1809796
15	12.0	0.0	0.0	chr19	6279913	6279939	(52337677)	+	(CCCG)n	Simple_repeat	1	27	(0)	1809797
23	18.3	4.7	1.5	chr19	6424702	6424765	(52192851)	+	(GGC)n	Simple_repeat	1	67	(0)	1810203
123	16.7	3.4	5.7	chr19	6429299	6429653	(52187963)	+	GA-rich	Low_complexity	1	367	(0)	1810214
239	32.5	0.0	1.1	chr19	7500631	7500717	(51116899)	+	L2b	LINE/L2	3265	3350	(25)	1813085
1352	18.6	4.3	0.1	chr19	7562695	7562974	(51054642)	C	L1MC2	LINE/L1	(514)	5830	5540	1813209
205	39.7	2.3	0.8	chr19	7563149	7563275	(51054341)	+	L2c	LINE/L2	2911	3039	(348)	1813212
16	26.5	1.7	3.3	chr19	7860952	7861011	(50756605)	+	G-rich	Low_complexity	1	61	(0)	1813869
187	31.4	2.8	0.0	chr19	7861382	7861451	(50756165)	+	MamRTE1	LINE/RTE-BovB	1369	1440	(2372)	1813870
207	12.6	2.6	2.3	chr19	7953265	7953653	(50663963)	+	(TCC)n	Simple_repeat	1	399	(0)	1814044
1355	16.1	5.0	1.0	chr19	8047014	8047321	(50570295)	+	L1M2	LINE/L1	2251	2571	(3572)	1814263
2338	10.8	0.0	0.0	chr19	8215197	8215501	(50402115)	+	AluSx	SINE/Alu	1	305	(7)	1814721
16	20.6	0.0	5.9	chr19	8367671	8367721	(50249895)	+	(CCTC)n	Simple_repeat	1	51	(0)	1815153
26	0.0	0.0	0.0	chr19	8367798	8367822	(50249794)	+	(TCAT)n	Simple_repeat	1	25	(0)	1815154
1294	8.5	0.0	3.4	chr19	8367834	8368010	(50249606)	C	AluSx1	SINE/Alu	(15)	297	127	1815155
384	23.3	14.5	0.1	chr19	8593066	8593246	(50024370)	C	MIRb	SINE/MIR	(12)	218	1	1815668
15	25.6	2.9	4.2	chr19	9945616	9945685	(48671931)	+	GA-rich	Low_complexity	1	72	(0)	1818521
13	11.1	3.2	3.1	chr19	10096519	10096549	(48521067)	+	(CAG)n	Simple_repeat	1	32	(0)	1818889
364	26.3	11.8	11.4	chr19	10096791	10096811	(48520805)	C	L2a	LINE/L2	(0)	3426	3408	1818890
2104	12.5	0.0	1.6	chr19	10096812	10097124	(48520492)	+	AluJo	SINE/Alu	1	308	(4)	1818891
13	9.7	0.0	0.0	chr19	10119656	10119677	(48497939)	+	(TCC)n	Simple_repeat	1	22	(0)	1818934
1352	11.4	0.0	0.5	chr19	10120092	10120104	(48497512)	+	AluSx1	SINE/Alu	120	132	(180)	1818935
2470	6.9	0.3	0.0	chr19	10120105	10120407	(48497209)	+	AluSx	SINE/Alu	1	304	(8)	1818936
13	15.8	6.8	2.1	chr19	10420911	10420954	(48196662)	+	(CGGCAG)n	Simple_repeat	1	47	(0)	1819694
14	17.1	6.2	2.0	chr19	10421038	10421085	(48196531)	+	(GGCAGC)n	Simple_repeat	1	51	(0)	1819695
215	32.5	6.6	2.6	chr19	10836752	10836868	(47780748)	+	MIR	SINE/MIR	112	233	(29)	1820785
521	25.0	6.3	2.6	chr19	10837002	10837211	(47780405)	+	MIRb	SINE/MIR	28	268	(0)	1820786
16	8.5	0.0	0.0	chr19	10960669	10960693	(47656923)	+	(CCG)n	Simple_repeat	1	25	(0)	1821123
36	28.3	3.0	4.8	chr19	10960847	10961046	(47656570)	+	G-rich	Low_complexity	1	206	(0)	1821124
299	24.2	4.8	8.7	chr19	11380719	11380842	(47236774)	+	MIR3	SINE/MIR	29	153	(55)	1822180
14	24.0	0.0	0.0	chr19	11380923	11380961	(47236655)	+	(AGGATG)n	Simple_repeat	1	39	(0)	1822181
1775	13.1	3.3	0.8	chr19	11382218	11382361	(47235255)	C	AluJo	SINE/Alu	(29)	283	137	1822182
494	32.7	10.2	0.3	chr19	11482871	11483152	(47134464)	+	L2a	LINE/L2	2967	3279	(147)	1822442
405	28.9	16.9	1.6	chr19	12749818	12750007	(45867609)	+	MIR	SINE/MIR	38	262	(0)	1825142
19	17.9	0.0	2.2	chr19	12775556	12775601	(45842015)	+	(GCCCC)n	Simple_repeat	1	46	(0)	1825188
2838	1.0	0.0	0.0	chr19	12775871	12776176	(45841440)	C	AluYe5	SINE/Alu	(4)	306	1	1825189
11	29.4	1.5	4.4	chr19	12792580	12792646	(45824970)	+	(AAGCGG)n	Simple_repeat	1	68	(0)	1825218
252	31.9	11.6	2.5	chr19	12800722	12800917	(45816699)	C	MIRb	SINE/MIR	(31)	237	22	1825238
13	3.1	15.2	0.0	chr19	12801855	12801887	(45815729)	+	(CGGAG)n	Simple_repeat	1	38	(0)	1825239
35	28.5	2.0	3.3	chr19	12833820	12833883	(45783733)	+	(CCG)n	Simple_repeat	1	104	(47)	1825326
29	8.4	0.0	5.4	chr19	12833884	12833940	(45783676)	+	(CTCCTCC)n	Simple_repeat	1	53	(0)	1825327
35	28.5	2.0	3.3	chr19	12833941	12833967	(45783649)	+	(CCG)n	Simple_repeat	105	151	(0)	1825326
13	17.5	0.0	6.8	chr19	12847262	12847305	(45770311)	+	(CTGCCC)n	Simple_repeat	1	44	(0)	1825351
186	11.1	0.0	7.7	chr19	13123181	13123219	(45494397)	+	L2a	LINE/L2	3030	3065	(361)	1825917
12	21.6	0.0	4.9	chr19	13123435	13123475	(45494141)	+	GA-rich	Low_complexity	1	41	(0)	1825918
19	34.4	3.0	4.6	chr19	13208124	13208291	(45409325)	+	GA-rich	Low_complexity	1	173	(0)	1826146
13	25.2	4.2	0.0	chr19	13208506	13208553	(45409063)	+	G-rich	Low_complexity	1	50	(0)	1826147
20	19.3	2.4	0.0	chr19	13211693	13211734	(45405882)	+	(TG)n	Simple_repeat	1	43	(0)	1826151
601	29.1	9.1	0.8	chr19	13442130	13442392	(45175224)	C	LTR16C	LTR/ERVL	(24)	465	179	1826786
1772	13.7	1.8	2.8	chr19	13775291	13775574	(44842042)	C	AluJr	SINE/Alu	(21)	291	11	1827761
18	22.1	2.9	4.3	chr19	13952544	13952611	(44665005)	+	(GCG)n	Simple_repeat	1	70	(0)	1828204
412	30.6	8.1	0.7	chr19	14247191	14247328	(44370288)	C	MIR	SINE/MIR	(80)	182	34	1828947
16	30.9	1.4	1.4	chr19	15380240	15380308	(43237308)	+	(GGC)n	Simple_repeat	1	70	(0)	1831698
17	14.2	0.0	0.0	chr19	15380373	15380403	(43237213)	+	(CCT)n	Simple_repeat	1	31	(0)	1831699
290	25.2	2.9	0.0	chr19	16628871	16628969	(41988647)	C	MER20	DNA/hAT-Charlie	(3)	216	115	1834294
16	0.0	0.0	0.0	chr19	17114925	17114942	(41502674)	+	(T)n	Simple_repeat	1	18	(0)	1835514
14	8.2	0.0	3.6	chr19	17328498	17328525	(41289091)	+	(GCCGC)n	Simple_repeat	1	28	(0)	1836039
39	10.2	0.0	0.0	chr19	17328584	17328646	(41288970)	+	(CCT)n	Simple_repeat	1	63	(0)	1836040
19	22.3	3.0	2.9	chr19	17328664	17328729	(41288887)	+	(TCC)n	Simple_repeat	1	68	(0)	1836041
12	20.5	2.0	5.9	chr19	17334383	17334432	(41283184)	+	(CCCCAG)n	Simple_repeat	1	51	(0)	1836049
33	25.9	1.0	2.0	chr19	17395197	17395295	(41222321)	+	(CTCCTC)n	Simple_repeat	1	100	(0)	1836217
208	28.8	7.6	0.0	chr19	17395353	17395425	(41222191)	+	L2a	LINE/L2	2990	3068	(358)	1836218
2314	10.1	0.0	0.0	chr19	17395533	17395829	(41221787)	+	AluSq2	SINE/Alu	1	297	(16)	1836219
12	18.1	0.0	3.0	chr19	17605990	17606050	(41011566)	+	(GCCCC)n	Simple_repeat	1	59	(0)	1836812
2208	10.8	2.3	0.3	chr19	17738827	17739123	(40878493)	+	AluSz	SINE/Alu	1	303	(9)	1837145
201	29.2	18.8	2.3	chr19	17739230	17739362	(40878254)	C	L2b	LINE/L2	(181)	3194	3035	1837146
695	29.0	9.6	1.5	chr19	17778935	17779662	(40837954)	C	L2a	LINE/L2	(23)	3403	2474	1837257
14	22.2	0.0	8.2	chr19	18281546	18281606	(40336010)	+	(CGCC)n	Simple_repeat	1	61	(0)	1838529
70	13.3	3.8	3.6	chr19	18304375	18304534	(40313082)	+	GA-rich	Low_complexity	1	166	(0)	1838584
2285	10.7	0.0	0.0	chr19	18305625	18305922	(40311694)	+	AluSz	SINE/Alu	1	298	(14)	1838585
31	11.4	0.0	0.0	chr19	18415571	18415619	(40201997)	+	(GGA)n	Simple_repeat	1	49	(0)	1838862
254	38.0	0.0	0.0	chr19	18415660	18415772	(40201844)	C	L2a	LINE/L2	(308)	3118	3006	1838863
20	24.7	1.8	0.0	chr19	18419440	18419496	(40198120)	+	(GCC)n	Simple_repeat	1	58	(0)	1838870
13	19.8	0.0	2.7	chr19	18419535	18419571	(40198045)	+	G-rich	Low_complexity	1	37	(0)	1838871
13	23.9	1.6	6.5	chr19	18419579	18419639	(40197977)	+	(GGC)n	Simple_repeat	1	62	(0)	1838872
12	17.4	0.0	8.7	chr19	18588917	18588962	(40028654)	+	G-rich	Low_complexity	1	46	(0)	1839178
32	3.0	0.0	0.0	chr19	18683656	18683689	(39933927)	+	(GAG)n	Simple_repeat	1	34	(0)	1839368
30	20.6	1.0	5.9	chr19	18683858	18683957	(39933659)	+	G-rich	Low_complexity	1	101	(0)	1839369
297	26.7	13.7	2.4	chr19	18737556	18737624	(39879992)	+	MLT1C	LTR/ERVL-MaLR	7	77	(390)	1839476
2040	16.9	3.5	10.5	chr19	18737625	18737739	(39879877)	+	Tigger2a	DNA/TcMar-Tigger	1	109	(325)	1839477
32	5.1	0.0	2.3	chr19	18737740	18737782	(39879834)	+	(CTC)n	Simple_repeat	1	43	(0)	1839478
2040	16.9	3.5	10.5	chr19	18737783	18738041	(39879575)	+	Tigger2a	DNA/TcMar-Tigger	110	361	(73)	1839477
14	18.8	4.5	2.2	chr19	18940029	18940072	(39677544)	+	GA-rich	Low_complexity	1	46	(0)	1839875
379	26.2	2.8	7.8	chr19	18986607	18986759	(39630857)	C	MIRb	SINE/MIR	(83)	185	41	1840013
231	19.4	6.9	1.5	chr19	18986837	18986904	(39630712)	+	HAL1M8	LINE/L1	1607	1678	(1313)	1840014
250	19.2	0.0	0.0	chr19	18987050	18987101	(39630515)	+	MER4-int	LTR/ERV1	1111	1162	(5436)	1840015
309	28.0	0.3	0.5	chr19	19034117	19034210	(39583406)	C	L2b	LINE/L2	(0)	3426	3306	1840113
293	22.5	1.9	4.1	chr19	19239340	19240216	(39377400)	+	(CCT)n	Simple_repeat	1	894	(0)	1840583
94	18.4	2.8	3.9	chr19	19533401	19533650	(39083966)	+	(CCT)n	Simple_repeat	1	257	(0)	1841145
2496	17.3	1.2	1.0	chr19	23117528	23118013	(35499603)	C	MER57E3	LTR/ERV1	(0)	487	1	1846191
247	17.3	3.7	0.0	chr19	29667378	29667429	(28950187)	+	L2a	LINE/L2	3368	3421	(5)	1850605
225	33.7	7.9	1.8	chr19	30567307	30567472	(28050144)	+	MIR3	SINE/MIR	24	200	(8)	1852038
15	17.9	0.0	4.8	chr19	31349277	31349318	(27268298)	+	G-rich	Low_complexity	1	42	(0)	1853080
39	18.5	1.0	4.0	chr19	31349425	31349523	(27268093)	+	GA-rich	Low_complexity	1	100	(0)	1853081
13	14.1	3.0	2.9	chr19	32692046	32692078	(25925538)	+	(CCG)n	Simple_repeat	1	34	(0)	1855320
2552	7.7	0.3	0.0	chr19	32744219	32744529	(25873087)	+	AluSz	SINE/Alu	1	312	(0)	1855421
412	32.9	8.6	9.8	chr19	33214576	33214952	(25402664)	+	L2c	LINE/L2	3003	3386	(1)	1856419
21	0.0	0.0	0.0	chr19	33639087	33639109	(24978507)	+	(A)n	Simple_repeat	1	23	(0)	1857091
264	23.4	1.1	6.0	chr19	33788589	33788688	(24828928)	+	L1MC	LINE/L1	4944	5038	(1108)	1857316
405	17.7	4.0	1.0	chr19	33788697	33788793	(24828823)	+	LTR81A	LTR/Gypsy	11	110	(1240)	1857317
34	19.1	3.9	6.0	chr19	33788799	33788926	(24828690)	+	GA-rich	Low_complexity	1	133	(0)	1857318
476	23.9	19.8	0.8	chr19	33789015	33789280	(24828336)	+	L1ME3Cz	LINE/L1	623	951	(46)	1857319
25	26.9	3.8	1.8	chr19	33795641	33795746	(24821870)	+	GA-rich	Low_complexity	1	110	(0)	1857330
18	16.6	2.0	3.9	chr19	34733308	34733358	(23884258)	+	A-rich	Low_complexity	1	52	(0)	1859055
13	9.1	2.2	10.9	chr19	35513558	35513602	(23104014)	+	(CCCT)n	Simple_repeat	1	46	(0)	1860572
20	15.0	3.3	9.7	chr19	35557852	35557941	(23059675)	+	G-rich	Low_complexity	1	93	(0)	1860653
229	22.7	3.0	5.8	chr19	35673041	35673143	(22944473)	C	L1ME2z	LINE/L1	(25)	6419	6320	1860922
338	19.9	1.8	0.0	chr19	35693876	35693979	(22923637)	+	LTR41	LTR/ERVL	90	194	(564)	1860987
104	17.0	0.4	6.7	chr19	35694035	35694303	(22923313)	+	(CCT)n	Simple_repeat	1	270	(0)	1860988
336	11.5	0.0	15.4	chr19	35694309	35694332	(22923284)	C	FRAM	SINE/Alu	(20)	156	136	1860989
904	19.2	0.0	6.2	chr19	35694333	35694509	(22923107)	+	AluJo	SINE/Alu	137	302	(10)	1860990
427	30.2	14.6	0.0	chr19	35701639	35701820	(22915796)	+	MIR	SINE/MIR	50	262	(0)	1861015
2454	9.3	0.0	0.0	chr19	35701851	35702162	(22915454)	C	AluSx1	SINE/Alu	(0)	312	1	1861016
15	16.9	4.0	3.9	chr19	35784618	35784667	(22832949)	+	(CCCGGC)n	Simple_repeat	1	52	(0)	1861143
19	21.2	1.5	4.5	chr19	35784773	35784837	(22832779)	+	(CCCTGCC)n	Simple_repeat	1	66	(0)	1861144
14	24.0	2.5	7.3	chr19	35784838	35784848	(22832768)	+	(CCCG)n	Simple_repeat	5	82	(0)	1861145
11	5.6	12.2	4.3	chr19	35784869	35784909	(22832707)	+	(GGCGCTT)n	Simple_repeat	1	46	(0)	1861146
25	19.3	0.0	0.0	chr19	35786505	35786557	(22831059)	+	(TCC)n	Simple_repeat	1	53	(0)	1861147
1270	20.8	1.2	4.8	chr19	35828564	35828827	(22788789)	+	MER58B	DNA/hAT-Charlie	85	339	(2)	1861260
2396	9.1	0.0	0.0	chr19	37988395	37988691	(20628925)	+	AluSx1	SINE/Alu	2	298	(14)	1865559
368	29.7	11.9	2.9	chr19	37988716	37989130	(20628486)	+	L2a	LINE/L2	2871	3375	(0)	1865557
390	26.8	0.0	1.0	chr19	38319451	38319548	(20298068)	C	MER91A	DNA/hAT-Tip100	(75)	121	25	1866389
61	23.0	6.1	2.0	chr19	38523437	38523666	(20093950)	+	(CCCTCCT)n	Simple_repeat	1	244	(0)	1866854
280	21.5	0.0	13.2	chr19	38637291	38637323	(19980293)	+	MIRc	SINE/MIR	81	108	(160)	1867151
2360	7.2	0.7	0.0	chr19	38637324	38637613	(19980003)	C	AluY	SINE/Alu	(19)	292	1	1867152
14	13.1	0.0	0.0	chr19	38870851	38870876	(19746740)	+	(TCCT)n	Simple_repeat	1	26	(0)	1867629
12	21.9	3.9	3.8	chr19	38870877	38870898	(19746718)	+	(TCC)n	Simple_repeat	4	53	(0)	1867630
688	10.8	0.8	0.2	chr19	39196518	39196866	(19420750)	C	MSR1	Satellite	(1)	351	1	1868507
619	12.7	1.0	2.1	chr19	39403058	39403506	(19214110)	C	MSR1	Satellite	(0)	444	1	1869004
246	32.9	8.3	0.7	chr19	40268470	40268613	(18349003)	C	MIRb	SINE/MIR	(41)	227	72	1870614
2189	7.5	4.7	0.0	chr19	40268845	40269125	(18348491)	+	AluSp	SINE/Alu	1	295	(18)	1870615
21	24.2	2.2	5.4	chr19	40513021	40513111	(18104505)	+	(GGC)n	Simple_repeat	1	93	(0)	1871282
27	5.5	0.0	0.0	chr19	40597140	40597177	(18020439)	+	(GGGCGG)n	Simple_repeat	1	38	(0)	1871496
28	19.2	0.0	0.0	chr19	40605493	40605551	(18012065)	+	(GGCGGA)n	Simple_repeat	1	59	(0)	1871506
2211	8.7	2.0	0.0	chr19	40662554	40662841	(17954775)	C	AluSx1	SINE/Alu	(17)	295	2	1871650
230	36.8	2.1	5.6	chr19	41045237	41045380	(17572236)	+	L2b	LINE/L2	3176	3314	(61)	1872480
264	30.1	13.9	1.4	chr19	41174440	41174577	(17443039)	C	MIR	SINE/MIR	(23)	239	82	1872789
60	1.8	0.0	0.0	chr19	41174607	41174664	(17442952)	+	(GGA)n	Simple_repeat	1	58	(0)	1872790
37	0.0	2.2	0.0	chr19	41174665	41174710	(17442906)	+	(AAG)n	Simple_repeat	1	47	(0)	1872791
433	24.5	0.9	1.9	chr19	41175113	41175220	(17442396)	+	MIR	SINE/MIR	71	177	(85)	1872792
203	28.8	3.0	1.5	chr19	41190395	41190461	(17427155)	C	L2	LINE/L2	(939)	2480	2413	1872832
2260	10.3	0.0	0.0	chr19	41190745	41191035	(17426581)	+	AluSx1	SINE/Alu	1	291	(21)	1872836
18	20.0	3.8	1.8	chr19	41353639	41353691	(17263925)	+	(TCC)n	Simple_repeat	1	55	(0)	1873224
11	21.5	6.0	1.9	chr19	41928335	41928384	(16689232)	+	(GAGAGCT)n	Simple_repeat	1	53	(0)	1874188
13	23.8	3.9	1.9	chr19	41928395	41928445	(16689171)	+	(GCGG)n	Simple_repeat	1	53	(0)	1874189
35	9.8	0.0	0.0	chr19	41928464	41928518	(16689098)	+	(CTC)n	Simple_repeat	1	55	(0)	1874190
24	19.9	1.4	4.3	chr19	42069925	42069993	(16547623)	+	GA-rich	Low_complexity	1	70	(0)	1874502
22	16.8	8.2	3.3	chr19	42070106	42070190	(16547426)	+	(GCCT)n	Simple_repeat	1	92	(0)	1874503
40	18.7	3.0	1.9	chr19	42070218	42070318	(16547298)	+	GA-rich	Low_complexity	1	104	(0)	1874504
19	24.6	3.2	0.0	chr19	42176300	42176361	(16441255)	+	(TTTTAT)n	Simple_repeat	1	64	(0)	1874735
14	8.4	15.4	1.7	chr19	42176474	42176525	(16441091)	+	(CTCCG)n	Simple_repeat	1	60	(0)	1874736
590	11.6	1.6	0.5	chr19	42370345	42370655	(16246961)	C	MSR1	Satellite	(1)	314	1	1875127
12	22.4	0.0	2.6	chr19	43331522	43331559	(15286057)	+	G-rich	Low_complexity	1	38	(0)	1876517
78	30.8	0.0	0.4	chr19	43331707	43331939	(15285677)	+	(CA)n	Simple_repeat	1	233	(0)	1876518
18	8.0	0.0	0.0	chr19	43670083	43670109	(14947507)	+	(AGC)n	Simple_repeat	1	27	(0)	1877379
314	24.8	16.9	0.0	chr19	43670360	43670472	(14947144)	+	MIR	SINE/MIR	17	152	(110)	1877380
191	32.2	9.4	0.0	chr19	44500820	44500934	(14116682)	C	MIRb	SINE/MIR	(12)	256	130	1878829
457	32.8	11.9	3.9	chr19	44697642	44698469	(13919147)	C	L2b	LINE/L2	(9)	3366	2420	1879370
55	26.3	2.3	4.5	chr19	44718868	44719085	(13898531)	+	GA-rich	Low_complexity	1	223	(0)	1879425
251	33.0	0.0	0.0	chr19	44719257	44719350	(13898266)	C	MIRb	SINE/MIR	(65)	203	110	1879426
687	23.4	12.2	0.4	chr19	44719366	44719654	(13897962)	+	L2a	LINE/L2	2861	3189	(198)	1879427
527	11.4	2.8	0.0	chr19	44758862	44759000	(13858616)	+	MSR1	Satellite	1	142	(0)	1879543
381	13.7	1.0	7.3	chr19	44759063	44759172	(13858444)	+	MSR1	Satellite	5	107	(4)	1879543
14	28.8	0.0	0.0	chr19	44800462	44800508	(13817108)	+	(CCCCA)n	Simple_repeat	1	47	(0)	1879664
698	6.8	2.2	0.0	chr19	44800740	44802106	(13815510)	+	MSR1	Satellite	1	1397	(0)	1879665
15	19.9	0.0	4.5	chr19	44808301	44808344	(13809272)	+	G-rich	Low_complexity	1	44	(0)	1879682
12	23.6	7.6	1.4	chr19	44844643	44844708	(13772908)	+	(CCCGCCT)n	Simple_repeat	1	71	(0)	1879783
14	18.3	2.7	0.0	chr19	44844880	44844916	(13772700)	+	(AGCCC)n	Simple_repeat	1	38	(0)	1879784
18	13.4	2.2	4.3	chr19	44914790	44914834	(13702782)	+	G-rich	Low_complexity	1	46	(0)	1879953
13	13.3	2.7	5.3	chr19	44926882	44926918	(13690698)	+	G-rich	Low_complexity	1	38	(0)	1879985
246	27.1	9.3	5.4	chr19	45078897	45079070	(13538546)	+	MIRc	SINE/MIR	2	174	(94)	1880412
33	20.2	0.0	5.3	chr19	45420487	45420580	(13197036)	+	(CCT)n	Simple_repeat	1	94	(0)	1881253
1099	11.8	0.0	0.7	chr19	45420772	45420923	(13196693)	C	AluSx	SINE/Alu	(161)	151	1	1881254
12	13.3	2.7	5.3	chr19	45498864	45498900	(13118716)	+	(GCGAGC)n	Simple_repeat	1	38	(0)	1881472
220	26.8	4.7	0.0	chr19	45639039	45639120	(12978496)	C	MIRb	SINE/MIR	(120)	148	63	1881868
16	13.0	2.9	0.0	chr19	45816008	45816041	(12801575)	+	G-rich	Low_complexity	1	35	(0)	1882322
891	21.0	0.0	3.8	chr19	45817400	45817612	(12800004)	C	AluJo	SINE/Alu	(0)	312	121	1882324
707	23.8	3.6	4.5	chr19	45901057	45901254	(12716362)	+	MIRb	SINE/MIR	42	237	(31)	1882528
583	19.7	2.6	5.8	chr19	45974241	45974396	(12643220)	C	MIRb	SINE/MIR	(14)	254	104	1882725
1933	12.9	1.3	4.4	chr19	45974426	45974742	(12642874)	+	AluJo	SINE/Alu	6	312	(0)	1882726
187	28.6	1.8	0.0	chr19	46404312	46404367	(12213249)	C	L2b	LINE/L2	(290)	3085	3029	1883575
307	33.9	5.6	3.4	chr19	46404427	46404722	(12212894)	C	L2a	LINE/L2	(102)	3324	3022	1883576
353	38.1	2.5	1.1	chr19	46412620	46412892	(12204724)	C	MamGyp-int	LTR/Gypsy	(4609)	494	218	1883595
15	18.6	2.1	4.2	chr19	46416659	46416705	(12200911)	+	(GGCGGA)n	Simple_repeat	1	48	(0)	1883605
24	20.0	0.0	0.0	chr19	46416949	46416994	(12200622)	+	(T)n	Simple_repeat	1	46	(0)	1883606
1176	33.9	1.4	1.9	chr19	46470583	46471094	(12146522)	C	MamGyp-int	LTR/Gypsy	(4557)	546	38	1883748
292	27.2	7.2	0.0	chr19	46489892	46489994	(12127622)	C	L2a	LINE/L2	(2)	3373	3263	1883812
791	23.4	1.1	1.7	chr19	46513402	46513579	(12104037)	C	MER5B	DNA/hAT-Charlie	(0)	178	2	1883881
274	12.2	2.6	0.5	chr19	46513866	46513924	(12103692)	+	MIRc	SINE/MIR	109	168	(62)	1883882
2019	14.3	0.7	0.0	chr19	46514044	46514350	(12103266)	C	AluSz	SINE/Alu	(3)	309	1	1883883
267	26.2	0.0	1.5	chr19	46639934	46639999	(11977617)	C	MIRb	SINE/MIR	(82)	186	122	1884165
335	33.1	12.8	0.7	chr19	46640059	46640195	(11977421)	+	L2a	LINE/L2	2372	2527	(892)	1884166
24	21.9	7.2	3.7	chr19	46659280	46659404	(11958212)	+	G-rich	Low_complexity	1	134	(0)	1884226
948	25.2	10.2	2.5	chr19	46766476	46767066	(11850550)	C	L2a	LINE/L2	(203)	3223	2573	1884482
711	15.5	0.0	0.8	chr19	46813902	46814047	(11803569)	C	L1M3	LINE/L1	(726)	5447	5303	1884627
18	32.9	0.9	3.8	chr19	47112179	47112283	(11505333)	+	(GAGC)n	Simple_repeat	1	106	(0)	1885277
32	0.0	0.0	0.0	chr19	47112303	47112332	(11505284)	+	(TCC)n	Simple_repeat	1	30	(0)	1885278
15	12.0	0.0	3.3	chr19	47112359	47112388	(11505228)	+	(CCT)n	Simple_repeat	1	30	(0)	1885279
29	30.4	2.4	1.6	chr19	47112440	47112563	(11505053)	+	(GGC)n	Simple_repeat	1	127	(0)	1885280
37	38.7	3.0	5.4	chr19	47581999	47582462	(11035154)	+	(CTT)n	Simple_repeat	1	478	(0)	1886484
19	5.6	8.1	0.0	chr19	47610186	47610222	(11007394)	+	(GGAG)n	Simple_repeat	1	40	(0)	1886574
14	16.1	10.5	1.6	chr19	47713361	47713368	(10904248)	+	(CGTCC)n	Simple_repeat	1	22	(41)	1886851
15	18.4	2.7	0.0	chr19	47713369	47713405	(10904211)	+	(CCCT)n	Simple_repeat	1	38	(0)	1886852
14	16.1	10.5	1.6	chr19	47713406	47713417	(10904199)	+	(CGTCC)n	Simple_repeat	23	63	(0)	1886851
227	21.4	2.9	2.0	chr19	47991356	47991941	(10625675)	+	(CCT)n	Simple_repeat	1	603	(0)	1887640
856	28.6	2.3	0.0	chr19	48489596	48489808	(10127808)	C	MIR	SINE/MIR	(0)	262	45	1888861
190	38.4	1.4	0.0	chr19	48490034	48490106	(10127510)	+	MIRb	SINE/MIR	141	214	(54)	1888862
13	28.9	1.8	1.8	chr19	48543416	48543471	(10074145)	+	GA-rich	Low_complexity	1	57	(0)	1889018
15	18.9	2.3	2.2	chr19	48543759	48543802	(10073814)	+	(ACCCCAC)n	Simple_repeat	1	45	(0)	1889019
797	4.3	0.4	0.0	chr19	48543836	48544749	(10072867)	+	MSR1	Satellite	1	917	(0)	1889020
2255	11.3	2.0	0.0	chr19	48601866	48602165	(10015451)	+	AluJb	SINE/Alu	1	306	(6)	1889190
16	0.0	0.0	0.0	chr19	48602687	48602704	(10014912)	+	(A)n	Simple_repeat	1	18	(0)	1889191
57	0.0	0.0	0.0	chr19	48602705	48602753	(10014863)	+	(AT)n	Simple_repeat	1	49	(0)	1889192
14	10.7	3.1	3.0	chr19	48637382	48637413	(9980203)	+	GA-rich	Low_complexity	1	33	(0)	1889254
18	11.7	8.0	3.7	chr19	48645813	48645862	(9971754)	+	(CT)n	Simple_repeat	1	54	(0)	1889271
48	24.7	2.8	5.5	chr19	48646013	48646225	(9971391)	+	(CTCCTCC)n	Simple_repeat	1	219	(0)	1889272
14	21.7	0.0	10.3	chr19	48646681	48646758	(9970858)	+	(GGAGCG)n	Simple_repeat	1	78	(0)	1889273
14	16.9	2.3	4.4	chr19	48714440	48714483	(9903133)	+	(CGCGG)n	Simple_repeat	1	45	(0)	1889450
13	18.7	0.0	5.0	chr19	48714563	48714602	(9903014)	+	G-rich	Low_complexity	1	40	(0)	1889451
25	12.8	3.9	0.0	chr19	48716738	48716788	(9900828)	+	GA-rich	Low_complexity	1	53	(0)	1889456
659	8.8	1.3	0.6	chr19	48754863	48755280	(9862336)	+	MSR1	Satellite	1	420	(0)	1889518
16	0.0	0.0	0.0	chr19	48810737	48810753	(9806863)	+	(T)n	Simple_repeat	1	17	(0)	1889665
15	0.0	0.0	5.0	chr19	48836426	48836445	(9781171)	+	(TC)n	Simple_repeat	1	20	(0)	1889738
716	18.0	1.4	1.6	chr19	48836592	48837072	(9780544)	+	MSR1	Satellite	1	480	(0)	1889739
16	8.5	0.0	0.0	chr19	49115007	49115031	(9502585)	+	(TCC)n	Simple_repeat	1	25	(0)	1890413
2105	7.6	8.6	0.0	chr19	49445703	49445976	(9171640)	C	AluSq2	SINE/Alu	(11)	302	2	1891108
226	31.6	2.0	3.0	chr19	49446014	49446114	(9171502)	C	L2	LINE/L2	(492)	2927	2828	1891109
393	12.8	4.5	0.7	chr19	49476276	49476412	(9141204)	+	MSR1	Satellite	1	142	(1)	1891170
442	20.0	0.0	0.1	chr19	49637861	49637957	(8979659)	+	MIRc	SINE/MIR	72	167	(95)	1891592
40	14.0	1.4	0.0	chr19	49653442	49653512	(8964104)	+	GA-rich	Low_complexity	1	72	(0)	1891624
34	23.8	0.0	5.3	chr19	49746667	49746780	(8870836)	+	(CTCCTG)n	Simple_repeat	1	114	(0)	1891842
12	19.3	0.0	5.1	chr19	49929309	49929347	(8688269)	+	(CCCGCTC)n	Simple_repeat	1	39	(0)	1892228
1886	10.2	5.0	0.4	chr19	49986907	49987172	(8630444)	C	AluSg4	SINE/Alu	(31)	279	1	1892352
219	37.6	6.5	2.5	chr19	49987173	49987241	(8630375)	+	L2	LINE/L2	2428	2502	(917)	1892351
2154	11.6	1.7	0.0	chr19	50316460	50316751	(8300865)	+	AluSx1	SINE/Alu	2	298	(14)	1893260
30	24.3	4.0	5.2	chr19	50451343	50451491	(8166125)	+	GA-rich	Low_complexity	1	155	(0)	1893545
572	14.5	0.9	0.0	chr19	50451520	50451762	(8165854)	C	MSR1	Satellite	(11)	245	1	1893546
2372	9.6	0.3	0.0	chr19	50453534	50453835	(8163781)	C	AluSq	SINE/Alu	(6)	307	5	1893556
18	18.4	5.1	3.2	chr19	50566055	50566113	(8051503)	+	GA-rich	Low_complexity	1	62	(0)	1893805
12	27.6	0.0	5.2	chr19	50723968	50724025	(7893591)	+	G-rich	Low_complexity	1	58	(0)	1894169
12	25.9	0.0	2.3	chr19	50724026	50724068	(7893548)	+	(CAACCC)n	Simple_repeat	1	43	(0)	1894170
715	15.3	0.8	1.6	chr19	51390724	51391197	(7226419)	+	MSR1	Satellite	1	470	(0)	1895527
415	32.0	11.1	3.9	chr19	51688155	51688544	(6929072)	+	L2c	LINE/L2	2917	3338	(49)	1896047
87	27.5	4.3	2.6	chr19	51688644	51689110	(6928506)	+	GA-rich	Low_complexity	1	475	(0)	1896048
14	7.2	6.9	0.0	chr19	51689179	51689207	(6928409)	+	(CCTCCC)n	Simple_repeat	1	31	(0)	1896049
14	27.5	6.2	1.2	chr19	51689230	51689309	(6928307)	+	G-rich	Low_complexity	1	85	(0)	1896050
217	29.5	5.2	5.8	chr19	51690676	51690812	(6926804)	+	MIR3	SINE/MIR	58	193	(15)	1896053
13	11.2	3.2	3.1	chr19	51719643	51719673	(6897943)	+	(GCC)n	Simple_repeat	1	32	(0)	1896112
2491	8.2	0.0	0.0	chr19	52535050	52535355	(6082261)	+	AluY	SINE/Alu	1	306	(5)	1897652
499	22.7	2.7	0.0	chr19	52535403	52535512	(6082104)	C	FLAM_A	SINE/Alu	(27)	115	3	1897653
420	16.5	3.7	5.5	chr19	52600547	52600655	(6016961)	+	L1M4	LINE/L1	4889	4995	(1151)	1897804
320	24.2	2.3	0.0	chr19	52600685	52600795	(6016821)	C	FLAM_C	SINE/Alu	(17)	116	3	1897805
311	23.6	2.2	0.0	chr19	52690986	52691096	(5926520)	+	AluJb	SINE/Alu	4	220	(82)	1897974
32	2.7	2.5	2.4	chr19	52691115	52691154	(5926462)	+	(TC)n	Simple_repeat	1	41	(0)	1897975
424	19.3	3.5	5.2	chr19	52691157	52691271	(5926345)	C	L1M4	LINE/L1	(1140)	5006	4894	1897976
265	16.4	8.8	0.0	chr19	52858109	52858191	(5759425)	+	AluJb	SINE/Alu	139	219	(83)	1898333
2362	7.4	0.3	0.0	chr19	52858263	52858560	(5759056)	+	AluY	SINE/Alu	1	299	(12)	1898334
480	21.4	2.8	0.0	chr19	52943094	52943196	(5674420)	+	FLAM_A	SINE/Alu	3	108	(34)	1898517
297	19.5	2.4	7.6	chr19	52994107	52994225	(5623391)	+	FLAM_C	SINE/Alu	4	116	(17)	1898606
485	15.7	4.7	5.8	chr19	52994257	52994412	(5623204)	C	L1M4	LINE/L1	(1119)	5027	4869	1898607
297	20.0	2.8	1.5	chr19	53333138	53333249	(5284367)	C	FRAM	SINE/Alu	(19)	114	3	1899135
277	18.9	3.9	1.8	chr19	53467138	53467248	(5150368)	C	FRAM	SINE/Alu	(17)	116	3	1899411
3590	9.8	2.3	1.7	chr19	53580844	53581235	(5036381)	C	MER41C	LTR/ERV1	(123)	398	1	1899625
41	13.2	4.1	5.5	chr19	53905874	53905914	(4711702)	+	(TTC)n	Simple_repeat	1	38	(0)	1900554
54	10.5	2.9	0.0	chr19	53905915	53906016	(4711600)	+	(TC)n	Simple_repeat	1	105	(0)	1900555
64	0.0	0.0	1.6	chr19	53906026	53906086	(4711530)	+	(CCT)n	Simple_repeat	1	61	(0)	1900556
41	13.2	4.1	5.5	chr19	53906087	53906156	(4711460)	+	(TTC)n	Simple_repeat	3	73	(0)	1900557
756	8.0	1.4	1.6	chr19	53990321	53991215	(4626401)	+	MSR1	Satellite	1	893	(0)	1900753
650	12.5	1.6	0.5	chr19	54095477	54095856	(4521760)	C	MSR1	Satellite	(8)	384	1	1901066
1676	17.3	1.1	2.2	chr19	55145012	55145288	(3472328)	+	AluJr	SINE/Alu	1	274	(38)	1903101
53	19.1	0.8	2.5	chr19	55145303	55145420	(3472196)	+	GA-rich	Low_complexity	1	119	(0)	1903102
22	23.9	3.5	0.0	chr19	55180268	55180324	(3437292)	+	(GT)n	Simple_repeat	1	59	(0)	1903171
536	19.0	11.4	8.7	chr19	55639911	55640049	(2977567)	C	MER3	DNA/hAT-Charlie	(56)	153	2	1904215
13	22.0	2.7	0.0	chr19	55640125	55640161	(2977455)	+	(GCT)n	Simple_repeat	1	38	(0)	1904217
399	31.3	6.7	2.3	chr19	56154909	56155079	(2462537)	+	MIRb	SINE/MIR	5	187	(81)	1905234
1035	26.8	6.6	2.9	chr19	56155129	56155597	(2462019)	C	MER77	LTR/ERVL	(73)	531	1	1905235
19	15.9	2.4	0.0	chr19	56595157	56595198	(2022418)	+	(GCTCG)n	Simple_repeat	1	43	(0)	1906049
20	13.8	2.5	0.0	chr19	58396190	58396229	(221387)	+	GA-rich	Low_complexity	1	41	(0)	1909464
28	46.1	0.0	0.0	chr2	1743600	1743747	(240449782)	+	G-rich	Low_complexity	1	148	(0)	1912472
57	30.2	2.5	3.5	chr2	2848824	2849106	(239344423)	+	GA-rich	Low_complexity	1	290	(0)	1913736
16	9.7	0.0	0.0	chr2	3519872	3519893	(238673636)	+	(A)n	Simple_repeat	1	22	(0)	1914570
490	24.6	3.5	0.7	chr2	3585263	3585401	(238608128)	+	MER5A	DNA/hAT-Charlie	47	189	(0)	1914697
5320	15.8	1.9	3.3	chr2	7658188	7659036	(234534493)	C	LTR1A2	LTR/ERV1	(0)	837	1	1920208
1482	16.9	13.7	6.1	chr2	7702998	7703477	(234490052)	C	LTR49	LTR/ERV1	(51)	504	1	1920286
27	3.1	0.0	2.9	chr2	9400264	9400298	(232793231)	+	(CTTC)n	Simple_repeat	1	35	(0)	1922878
15	17.6	4.1	3.9	chr2	9630679	9630727	(232562802)	+	(CGG)n	Simple_repeat	1	51	(0)	1923321
21	14.1	3.3	4.8	chr2	10043495	10043554	(232149975)	+	(CCGCC)n	Simple_repeat	1	62	(0)	1924068
399	11.5	14.5	6.2	chr2	10120423	10120535	(232072994)	+	FLAM_C	SINE/Alu	12	135	(8)	1924224
17	18.1	0.0	7.0	chr2	10448011	10448067	(231745462)	+	(CCGCGGC)n	Simple_repeat	1	57	(0)	1924772
596	24.6	13.8	0.6	chr2	10712357	10712683	(231480846)	C	L2	LINE/L2	(2795)	624	248	1925305
334	16.2	0.0	10.5	chr2	10712802	10712818	(231480711)	C	L1MC4	LINE/L1	(0)	8042	8028	1925306
2140	15.1	0.0	0.3	chr2	10712819	10713130	(231480399)	C	AluJb	SINE/Alu	(1)	311	1	1925307
11	17.7	5.0	2.4	chr2	10775259	10775298	(231418231)	+	(GGAGCCG)n	Simple_repeat	1	42	(0)	1925455
273	22.8	8.0	3.2	chr2	10775310	10775404	(231418125)	C	MIRb	SINE/MIR	(54)	214	115	1925456
1189	24.9	20.8	5.8	chr2	11550248	11550891	(230642638)	C	HAL1	LINE/L1	(1708)	799	1	1926857
19	20.9	5.3	6.7	chr2	15942473	15942585	(226250944)	+	(GGCCGCG)n	Simple_repeat	1	119	(0)	1933619
13	25.0	2.0	2.0	chr2	15942661	15942709	(226250820)	+	(GCCCGC)n	Simple_repeat	1	50	(0)	1933620
67	22.8	2.5	2.9	chr2	16039367	16039497	(226154032)	+	(CTTC)n	Simple_repeat	1	129	(0)	1933825
28	5.9	0.0	0.0	chr2	16039498	16039533	(226153996)	+	(TCCCT)n	Simple_repeat	1	36	(0)	1933826
67	12.6	1.3	1.5	chr2	16039534	16039664	(226153865)	+	(CTTC)n	Simple_repeat	1	130	(0)	1933827
253	31.6	3.6	6.4	chr2	16093668	16093867	(226099662)	C	L2c	LINE/L2	(232)	3155	2965	1933928
34	11.6	1.4	5.3	chr2	17916339	17916412	(224277117)	+	GA-rich	Low_complexity	1	75	(0)	1936711
242	32.7	8.9	1.4	chr2	17916644	17916807	(224276722)	+	L2a	LINE/L2	3200	3418	(8)	1936712
5336	12.1	13.0	9.7	chr2	20105982	20107080	(222086449)	C	LTR12D	LTR/ERV1	(113)	1141	1	1939766
2337	9.8	0.0	0.3	chr2	20107173	20107478	(222086051)	+	AluSc8	SINE/Alu	1	305	(6)	1939767
14	10.3	3.0	2.9	chr2	20651130	20651162	(221542367)	+	(CCCTG)n	Simple_repeat	1	34	(0)	1940695
27	19.1	3.6	3.5	chr2	23658078	23658160	(218535369)	+	(CCT)n	Simple_repeat	1	86	(0)	1944663
26	0.0	0.0	0.0	chr2	23684663	23684687	(218508842)	+	(CTC)n	Simple_repeat	1	25	(0)	1944692
13	17.4	0.0	2.9	chr2	24123807	24123840	(218069689)	+	G-rich	Low_complexity	1	34	(0)	1945548
12	19.6	3.9	5.6	chr2	25042722	25042773	(217150756)	+	(GCG)n	Simple_repeat	1	54	(0)	1947189
409	28.2	17.9	3.1	chr2	25090389	25090611	(217102918)	C	Charlie18a	DNA/hAT-Charlie	(63)	279	17	1947286
18	21.4	3.8	4.8	chr2	25197882	25197939	(216995590)	+	GA-rich	Low_complexity	21	78	(0)	1947497
342	34.7	1.6	2.5	chr2	25198314	25198558	(216994971)	+	L1M5	LINE/L1	4341	4583	(1563)	1947498
13	22.7	0.0	0.0	chr2	25342311	25342346	(216851183)	+	G-rich	Low_complexity	1	36	(0)	1947760
504	26.3	4.3	1.9	chr2	25342754	25342912	(216850617)	+	L3	LINE/CR1	3929	4091	(8)	1947761
12	28.7	0.0	3.7	chr2	25673638	25673691	(216519838)	+	G-rich	Low_complexity	1	54	(0)	1948350
250	33.6	12.1	1.7	chr2	25673989	25674276	(216519253)	C	L2c	LINE/L2	(38)	3349	3028	1948351
13	25.6	3.4	3.3	chr2	27217329	27217387	(214976142)	+	(CCG)n	Simple_repeat	1	61	(0)	1951395
12	24.8	0.0	2.5	chr2	27715771	27715810	(214477719)	+	G-rich	Low_complexity	1	40	(0)	1952334
25	16.9	4.3	2.7	chr2	28392701	28392770	(213800759)	+	(CCT)n	Simple_repeat	1	73	(0)	1953484
332	32.0	6.2	5.1	chr2	28811152	28811309	(213382220)	+	L1M4b	LINE/L1	458	617	(6250)	1954259
379	30.0	5.3	1.8	chr2	30404241	30404403	(211789126)	+	MIR3	SINE/MIR	33	201	(7)	1956947
1050	25.7	1.5	0.0	chr2	31050517	31050773	(211142756)	+	L1MD3	LINE/L1	7729	7989	(6)	1957894
28	16.9	0.0	0.0	chr2	31138378	31138430	(211055099)	+	(CGC)n	Simple_repeat	1	53	(0)	1958026
15	11.2	0.0	3.2	chr2	31138684	31138714	(211054815)	+	(GGGGC)n	Simple_repeat	1	31	(0)	1958027
15	18.5	5.9	1.9	chr2	36355764	36355818	(205837711)	+	(GGAGC)n	Simple_repeat	1	57	(0)	1965962
15	20.1	5.7	1.8	chr2	36355925	36355977	(205837552)	+	(CGC)n	Simple_repeat	1	56	(0)	1965963
241	30.1	13.5	4.4	chr2	36455602	36455962	(205737567)	C	L2	LINE/L2	(2803)	616	218	1966079
3834	21.6	6.7	2.5	chr2	36687818	36688078	(205505451)	C	L1MC4a	LINE/L1	(8)	7874	7615	1966359
10070	6.1	12.1	0.1	chr2	36688079	36689466	(205504063)	+	LTR12C	LTR/ERV1	3	1579	(0)	1966360
336	23.6	5.7	19.5	chr2	37875982	37876186	(204317343)	C	L2a	LINE/L2	(0)	3426	3213	1968376
1649	7.3	0.5	0.0	chr2	38536547	38536750	(203656779)	+	AluSx	SINE/Alu	103	307	(5)	1969427
27	19.5	3.1	5.9	chr2	39437114	39437211	(202756318)	+	(CGC)n	Simple_repeat	1	101	(0)	1971190
16	18.8	2.3	2.2	chr2	39437296	39437339	(202756190)	+	(CTC)n	Simple_repeat	1	45	(0)	1971191
41	8.2	0.0	0.0	chr2	41937460	41937512	(200256017)	+	(AC)n	Simple_repeat	1	53	(0)	1974671
2182	10.3	2.3	0.0	chr2	42043468	42043784	(200149745)	+	AluSz	SINE/Alu	2	312	(0)	1974862
12	15.3	2.4	7.0	chr2	42493992	42494033	(199699496)	+	(CGG)n	Simple_repeat	1	43	(0)	1975681
1226	26.0	14.5	1.1	chr2	43137290	43137984	(199055545)	+	L2a	LINE/L2	2609	3424	(2)	1976948
13	23.0	0.0	2.6	chr2	43225378	43225415	(198968114)	+	(CTG)n	Simple_repeat	1	38	(0)	1977141
13	14.4	3.0	2.9	chr2	43225523	43225555	(198967974)	+	(CCG)n	Simple_repeat	1	34	(0)	1977142
12	9.3	0.0	4.0	chr2	44768651	44768675	(197424854)	+	(CCCG)n	Simple_repeat	1	25	(0)	1979729
34	0.0	0.0	2.8	chr2	44941795	44941830	(197251699)	+	(CTCTCC)n	Simple_repeat	1	36	(0)	1979980
23	20.6	2.0	0.0	chr2	44941889	44941938	(197251591)	+	(TG)n	Simple_repeat	1	51	(0)	1979981
46	25.0	0.0	0.0	chr2	44942199	44942311	(197251218)	+	(GCG)n	Simple_repeat	1	113	(0)	1979982
25	30.9	1.0	2.0	chr2	44944770	44944867	(197248662)	+	(CCTCCC)n	Simple_repeat	1	99	(0)	1979985
13	23.3	4.4	0.0	chr2	44949967	44950011	(197243518)	+	GA-rich	Low_complexity	1	47	(0)	1979991
221	29.4	2.3	6.6	chr2	47264636	47264726	(194928803)	+	MIR3	SINE/MIR	90	176	(32)	1983667
203	25.0	2.0	0.0	chr2	47269967	47270014	(194923515)	+	L2c	LINE/L2	3339	3387	(0)	1983682
234	24.5	11.3	12.1	chr2	47270194	47270309	(194923220)	+	L2c	LINE/L2	3268	3382	(5)	1983683
306	22.2	2.1	5.5	chr2	47369285	47369484	(194824045)	+	LTR41B	LTR/ERVL	252	444	(314)	1983926
17	13.2	1.4	4.0	chr2	48530025	48530063	(193663466)	+	G-rich	Low_complexity	1	37	(0)	1986145
34	12.1	0.0	0.0	chr2	48530116	48530170	(193663359)	+	(TCC)n	Simple_repeat	1	55	(0)	1986146
38	16.8	4.6	0.0	chr2	51032140	51032226	(191161303)	+	GA-rich	Low_complexity	1	91	(0)	1989561
32	21.9	1.3	0.0	chr2	55050129	55050207	(187143322)	+	(TCCTCC)n	Simple_repeat	1	80	(0)	1995181
13	21.7	0.0	0.0	chr2	55050321	55050352	(187143177)	+	(GCC)n	Simple_repeat	1	32	(0)	1995182
2439	6.5	0.0	0.3	chr2	55223800	55224093	(186969436)	C	AluSg	SINE/Alu	(16)	294	2	1995514
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
22	5.8	2.6	2.6	chr2	56184633	56184670	(186008859)	+	(GGC)n	Simple_repeat	1	39	(0)	1997104
16	22.5	4.5	2.9	chr2	61177289	61177354	(181016175)	+	(CCCCG)n	Simple_repeat	1	69	(0)	2003841
16	16.8	7.3	1.7	chr2	61177366	61177378	(181016151)	+	(GGCCGG)n	Simple_repeat	1	58	(0)	2003842
19	11.6	0.0	4.9	chr2	61177379	61177419	(181016110)	+	G-rich	Low_complexity	1	41	(0)	2003843
202	21.7	2.8	9.2	chr2	63059414	63059489	(179134040)	+	MIR	SINE/MIR	60	130	(132)	2007381
328	33.6	8.8	9.1	chr2	63059510	63059784	(179133745)	C	L1M4b	LINE/L1	(6375)	492	219	2007382
14	14.6	5.0	2.4	chr2	64767982	64768028	(177425501)	+	(CGCCCG)n	Simple_repeat	1	48	(0)	2009902
15	31.6	0.0	2.9	chr2	65436156	65436189	(176757340)	+	(CGCCC)n	Simple_repeat	1	68	(0)	2011239
13	13.6	2.9	2.9	chr2	65436190	65436223	(176757306)	+	(CCCCCG)n	Simple_repeat	1	35	(0)	2011240
17	18.4	0.0	0.0	chr2	65580138	65580174	(176613355)	+	(CCTC)n	Simple_repeat	1	37	(0)	2011573
12	28.2	1.9	1.9	chr2	70142416	70142468	(172051061)	+	(CCGC)n	Simple_repeat	1	54	(0)	2018486
16	25.6	0.0	3.4	chr2	70790575	70790633	(171402896)	+	G-rich	Low_complexity	1	59	(0)	2019614
531	24.0	8.3	0.6	chr2	71695665	71695828	(170497701)	C	MIRb	SINE/MIR	(7)	261	86	2021019
405	32.0	0.0	0.0	chr2	71923769	71923868	(170269661)	C	MIRb	SINE/MIR	(139)	129	30	2021334
645	30.5	0.5	6.2	chr2	71924200	71924423	(170269106)	C	MIR	SINE/MIR	(19)	243	33	2021335
475	26.9	7.8	3.4	chr2	73233800	73234007	(168959522)	+	MIRb	SINE/MIR	19	236	(32)	2023375
18	25.4	1.8	0.0	chr2	73269059	73269125	(168924404)	+	G-rich	Low_complexity	1	68	(0)	2023421
16	15.4	4.4	2.1	chr2	73269389	73269433	(168924096)	+	G-rich	Low_complexity	1	47	(0)	2023422
27	3.4	0.0	0.0	chr2	73269452	73269481	(168924048)	+	(GCG)n	Simple_repeat	1	30	(0)	2023423
30	19.8	1.9	6.5	chr2	73284383	73284487	(168909042)	+	GA-rich	Low_complexity	1	107	(0)	2023446
18	9.1	5.3	2.5	chr2	73385805	73385842	(168807687)	+	(CTC)n	Simple_repeat	1	40	(0)	2023643
19	20.3	0.0	2.1	chr2	73385843	73385850	(168807679)	+	(CTCCCC)n	Simple_repeat	3	48	(0)	2023644
51	2.0	0.0	0.0	chr2	73385904	73385953	(168807576)	+	(GGA)n	Simple_repeat	1	50	(0)	2023645
12	31.9	0.0	0.0	chr2	73385981	73386030	(168807499)	+	(GAGGTG)n	Simple_repeat	1	50	(0)	2023646
13	29.1	3.1	1.5	chr2	74553991	74554054	(167639475)	+	(TCTCCCT)n	Simple_repeat	1	66	(0)	2025553
16	14.5	5.3	0.0	chr2	74554224	74554261	(167639268)	+	(GCG)n	Simple_repeat	1	40	(0)	2025554
180	10.5	0.4	0.0	chr2	74561018	74561280	(167632249)	+	(AGG)n	Simple_repeat	1	264	(0)	2025560
13	7.2	3.0	5.9	chr2	74561306	74561338	(167632191)	+	(CTCAT)n	Simple_repeat	1	34	(0)	2025561
13	8.3	0.0	6.7	chr2	74648174	74648203	(167545326)	+	(GCCCA)n	Simple_repeat	1	30	(0)	2025726
14	8.4	0.0	3.7	chr2	74958682	74958708	(167234821)	+	(GGC)n	Simple_repeat	1	27	(0)	2026250
13462	17.3	3.1	2.7	chr2	75240774	75243077	(166950452)	+	L1P4a	LINE/L1	5	2310	(4193)	2026682
1209	24.4	8.6	8.0	chr2	75290797	75291294	(166902235)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	5	2026747
59	23.1	2.1	3.6	chr2	79513228	79513417	(162680112)	+	(CCTC)n	Simple_repeat	1	194	(0)	2032401
16	7.5	0.0	3.3	chr2	84905594	84905623	(157287906)	+	(GGCGG)n	Simple_repeat	1	30	(0)	2039635
202	28.4	9.9	7.2	chr2	84959768	84959934	(157233595)	C	L2c	LINE/L2	(2)	3385	3214	2039778
255	31.7	1.0	2.9	chr2	84959944	84960047	(157233482)	C	MER5B	DNA/hAT-Charlie	(2)	176	75	2039779
1086	14.3	1.8	3.0	chr2	84960189	84960356	(157233173)	C	AluJb	SINE/Alu	(10)	302	137	2039780
15	12.1	0.0	0.0	chr2	85431821	85431848	(156761681)	+	(TCCCA)n	Simple_repeat	1	28	(0)	2040742
396	35.1	3.5	0.6	chr2	85432038	85432203	(156761326)	C	MIRc	SINE/MIR	(13)	255	85	2040743
1497	17.0	6.9	1.0	chr2	85561970	85562257	(156631272)	+	AluJr	SINE/Alu	1	306	(6)	2041028
13	12.0	4.7	6.7	chr2	85665435	85665477	(156528052)	+	(CTCC)n	Simple_repeat	1	45	(0)	2041249
13	23.0	2.0	4.0	chr2	88003239	88003287	(154190242)	+	(CTC)n	Simple_repeat	1	50	(0)	2045100
275	37.5	3.0	0.8	chr2	95277717	95277845	(146915684)	C	MIR	SINE/MIR	(20)	242	111	2050442
105	21.8	3.1	2.4	chr2	96103993	96104281	(146089248)	+	(CTC)n	Simple_repeat	1	298	(0)	2051569
240	16.3	0.0	0.0	chr2	96335614	96335656	(145857873)	C	Charlie4z	DNA/hAT-Charlie	(96)	71	29	2051963
15	8.2	4.3	4.3	chr2	96335904	96335939	(145857590)	+	G-rich	Low_complexity	1	36	(0)	2051964
14	20.0	2.4	2.3	chr2	96335988	96336029	(145857500)	+	G-rich	Low_complexity	1	43	(0)	2051964
808	17.5	0.6	4.4	chr2	96547124	96547283	(145646246)	C	AluSx	SINE/Alu	(152)	160	7	2052328
13	17.5	5.1	0.0	chr2	96547359	96547397	(145646132)	+	(CTCCTTA)n	Simple_repeat	1	41	(0)	2052329
756	25.4	6.0	5.8	chr2	96547680	96548042	(145645487)	C	Charlie15b	DNA/hAT-Charlie	(0)	1061	698	2052330
14	25.8	1.7	3.3	chr2	96869369	96869427	(145324102)	+	(CGGCC)n	Simple_repeat	1	60	(0)	2052932
367	27.3	17.0	3.5	chr2	96920619	96920937	(145272592)	C	L2a	LINE/L2	(24)	3402	3025	2053009
769	20.0	4.1	2.1	chr2	98608861	98609049	(143584480)	C	MER53	DNA/hAT	(0)	193	1	2055213
41	14.8	2.8	5.4	chr2	100820014	100820121	(141373408)	+	GA-rich	Low_complexity	1	111	(0)	2058575
26	23.5	1.3	2.5	chr2	100820198	100820275	(141373254)	+	(GCG)n	Simple_repeat	1	79	(0)	2058576
15	18.8	2.3	2.2	chr2	100820364	100820407	(141373122)	+	(CCCGG)n	Simple_repeat	1	45	(0)	2058577
408	28.9	5.3	6.4	chr2	100895255	100895502	(141298027)	C	MIRb	SINE/MIR	(8)	260	13	2058688
2975	24.4	4.7	0.9	chr2	100918241	100919367	(141274162)	+	L1ME1	LINE/L1	5376	6552	(25)	2058728
19	11.7	0.0	0.0	chr2	100919373	100919400	(141274129)	+	(A)n	Simple_repeat	1	28	(0)	2058730
12	19.1	2.6	2.6	chr2	101308488	101308525	(140885004)	+	(GCCCGG)n	Simple_repeat	1	39	(0)	2059376
3119	23.3	3.3	3.7	chr2	101441647	101443029	(140750500)	C	L1MD2	LINE/L1	(3751)	2786	513	2059586
30	14.0	2.6	5.0	chr2	104853225	104853302	(137340227)	+	GA-rich	Low_complexity	1	80	(0)	2064063
15	10.0	0.0	0.0	chr2	105143794	105143815	(137049714)	+	(AC)n	Simple_repeat	1	22	(0)	2064465
14	12.5	0.0	3.5	chr2	105143815	105143855	(137049674)	+	(CCT)n	Simple_repeat	1	39	(0)	2064466
29	23.3	1.2	2.4	chr2	105143996	105144079	(137049450)	+	(CCT)n	Simple_repeat	1	85	(0)	2064467
34	2.9	0.0	0.0	chr2	105744866	105744901	(136448628)	+	(CGC)n	Simple_repeat	1	36	(0)	2065431
551	21.7	17.8	2.7	chr2	105795582	105795766	(136397763)	+	MER20	DNA/hAT-Charlie	1	219	(0)	2065505
13	18.4	7.0	0.0	chr2	106065663	106065705	(136127824)	+	(CCCGCG)n	Simple_repeat	1	46	(0)	2065865
18	16.1	1.9	5.5	chr2	109046968	109047021	(133146508)	+	(CCCTG)n	Simple_repeat	1	55	(0)	2070186
277	31.1	0.8	12.5	chr2	109047443	109047496	(133146033)	C	MIRc	SINE/MIR	(102)	166	113	2070187
18	22.9	3.4	8.1	chr2	109128395	109128513	(133065016)	+	(GCGCCGG)n	Simple_repeat	1	123	(0)	2070332
18	9.6	6.2	3.9	chr2	109614268	109614315	(132579214)	+	G-rich	Low_complexity	1	51	(0)	2070958
13	24.7	0.0	5.7	chr2	110115587	110115639	(132077890)	+	(CGGTC)n	Simple_repeat	1	53	(0)	2071761
28	23.9	3.3	1.1	chr2	110732466	110732555	(131460974)	+	G-rich	Low_complexity	1	93	(0)	2072634
2290	7.4	0.6	0.3	chr2	110812310	110812621	(131380908)	C	L1PA14	LINE/L1	(2)	6159	5847	2072745
19	24.7	0.0	1.8	chr2	111117216	111117270	(131076259)	+	G-rich	Low_complexity	1	55	(0)	2073124
12	4.5	4.0	3.9	chr2	111120579	111120603	(131072926)	+	(GCC)n	Simple_repeat	1	26	(0)	2073127
2213	10.4	0.0	0.7	chr2	111970157	111970455	(130223074)	C	AluSz	SINE/Alu	(14)	298	2	2074346
552	14.9	2.4	3.2	chr2	111970456	111970560	(130222969)	C	L1MB7	LINE/L1	(21)	6163	6061	2074345
5295	17.6	5.4	1.8	chr2	111970561	111970662	(130222867)	C	L1MEc	LINE/L1	(2417)	3902	3796	2074344
119	5.7	1.0	5.3	chr2	111970663	111970867	(130222662)	+	(TCC)n	Simple_repeat	1	207	(0)	2074347
180	28.5	8.9	3.1	chr2	112181575	112181701	(130011828)	+	L2b	LINE/L2	3213	3347	(28)	2074679
14	10.1	6.2	0.0	chr2	113889918	113889949	(128303580)	+	G-rich	Low_complexity	1	34	(0)	2077575
17	11.7	0.0	8.9	chr2	113890006	113890050	(128303479)	+	GA-rich	Low_complexity	1	45	(0)	2077576
12	11.9	0.0	6.5	chr2	113890041	113890071	(128303458)	+	G-rich	Low_complexity	1	31	(0)	2077577
18	9.7	0.0	5.4	chr2	113890231	113890267	(128303262)	+	(AGC)n	Simple_repeat	1	37	(0)	2077578
539	24.5	11.7	0.5	chr2	119113009	119113197	(123080332)	+	MamTip2	DNA/hAT-Tip100	4	216	(89)	2084720
12	18.8	2.6	2.6	chr2	119158659	119158696	(123034833)	+	(GCTCC)n	Simple_repeat	1	39	(0)	2084798
15	33.3	3.0	0.0	chr2	119159008	119159074	(123034455)	+	(AC)n	Simple_repeat	1	69	(0)	2084799
186	22.2	0.0	4.5	chr2	119431377	119431442	(122762087)	C	MIRc	SINE/MIR	(139)	129	67	2085324
17	8.5	2.3	6.8	chr2	119431777	119431819	(122761710)	+	(CGCCC)n	Simple_repeat	1	44	(0)	2085325
197	27.6	14.2	3.8	chr2	119524632	119524763	(122668766)	+	MIRb	SINE/MIR	23	170	(98)	2085509
213	28.2	8.2	0.0	chr2	120239401	120239478	(121954051)	+	L2b	LINE/L2	3284	3368	(7)	2086636
13	21.3	1.9	5.5	chr2	120252985	120253038	(121940491)	+	G-rich	Low_complexity	1	55	(0)	2086660
20	20.2	0.0	2.0	chr2	120780412	120780460	(121413069)	+	GA-rich	Low_complexity	1	49	(0)	2087546
305	31.1	3.6	2.8	chr2	120780624	120780732	(121412797)	C	MIR	SINE/MIR	(92)	170	61	2087547
239	32.6	9.1	3.1	chr2	121076032	121076407	(121117122)	+	L2c	LINE/L2	2972	3368	(7)	2088003
596	26.2	12.6	3.7	chr2	121076983	121077358	(121116171)	C	ERV3-16A3_LTR	LTR/ERVL	(0)	422	9	2088004
3792	18.6	4.5	6.6	chr2	121685129	121686558	(120506971)	C	HERV3-int	LTR/ERV1	(6945)	1481	1	2089112
3641	9.1	3.2	0.4	chr2	121686559	121687045	(120506484)	C	LTR2C	LTR/ERV1	(0)	501	1	2089112
180	25.0	10.4	3.2	chr2	122660741	122660864	(119532665)	C	MIR3	SINE/MIR	(68)	140	7	2090720
384	18.0	21.6	5.1	chr2	126971826	126972001	(115221528)	+	MLT1H2	LTR/ERVL-MaLR	277	489	(0)	2096674
39	0.0	0.0	0.0	chr2	127105468	127105503	(115088026)	+	(CCT)n	Simple_repeat	1	36	(0)	2096881
15	19.3	4.1	2.0	chr2	127387975	127388023	(114805506)	+	(CGTCGCG)n	Simple_repeat	1	51	(0)	2097357
15	18.6	0.0	6.2	chr2	129827421	129827426	(112366103)	+	(GCGG)n	Simple_repeat	1	44	(0)	2100930
13	24.8	0.0	0.0	chr2	129827427	129827464	(112366065)	+	(GGAGCG)n	Simple_repeat	1	38	(0)	2100931
184	39.2	3.2	6.7	chr2	129827775	129827938	(112365591)	C	L2	LINE/L2	(576)	2843	2686	2100932
15	17.1	0.0	9.1	chr2	132670108	132670162	(109523367)	+	(CGCTCG)n	Simple_repeat	1	55	(0)	2104909
12	18.4	5.4	0.0	chr2	132670275	132670311	(109523218)	+	(GTGGCGG)n	Simple_repeat	1	39	(0)	2104910
13	11.1	3.2	3.1	chr2	135876443	135876473	(106317056)	+	(CGC)n	Simple_repeat	1	32	(0)	2109773
48	7.0	0.0	0.0	chr2	136765482	136765542	(105427987)	+	(TCC)n	Simple_repeat	1	61	(0)	2111175
1589	15.5	8.0	2.8	chr2	138576913	138577196	(103616333)	+	AluJb	SINE/Alu	1	300	(12)	2113621
18	4.7	0.0	0.0	chr2	138577208	138577229	(103616300)	+	(TG)n	Simple_repeat	1	22	(0)	2113622
21	3.9	0.0	0.0	chr2	138577229	138577251	(103616278)	+	(GA)n	Simple_repeat	1	23	(0)	2113623
40	2.5	0.0	0.0	chr2	138577252	138577292	(103616237)	+	(GGA)n	Simple_repeat	1	41	(0)	2113624
3805	30.3	8.4	5.2	chr2	149900627	149902010	(92291519)	C	HERV16-int	LTR/ERVL	(3601)	1395	1	2128674
682	26.0	7.6	4.9	chr2	149902021	149902263	(92291266)	C	LTR16	LTR/ERVL	(3)	435	186	2128674
15	24.1	1.4	6.8	chr2	151828341	151828412	(90365117)	+	(GCC)n	Simple_repeat	1	73	(0)	2131422
538	30.0	11.1	8.3	chr2	151998965	151999472	(90194057)	C	HAL1ME	LINE/L1	(1931)	534	11	2131673
1965	6.2	2.6	5.2	chr2	152428932	152429202	(89764327)	+	L1PA11	LINE/L1	5909	6172	(2)	2132416
22	10.5	0.0	0.0	chr2	152429213	152429243	(89764286)	+	(A)n	Simple_repeat	1	31	(0)	2132417
13	13.0	0.0	3.6	chr2	152717632	152717659	(89475870)	+	GA-rich	Low_complexity	1	28	(0)	2132825
12	22.8	1.7	6.8	chr2	153478574	153478631	(88714898)	+	G-rich	Low_complexity	1	59	(0)	2133770
15	8.8	5.0	4.8	chr2	156436293	156436332	(85757197)	+	G-rich	Low_complexity	1	42	(0)	2137474
23	32.0	0.0	2.2	chr2	157876292	157876383	(84317146)	+	GA-rich	Low_complexity	1	92	(0)	2139335
23	28.9	1.2	1.2	chr2	158984665	158984745	(83208784)	+	GA-rich	Low_complexity	1	82	(0)	2140934
246	33.0	9.9	3.9	chr2	158984768	158985127	(83208402)	C	L2	LINE/L2	(337)	3082	2699	2140935
21	16.8	1.4	7.1	chr2	159798202	159798270	(82395259)	+	G-rich	Low_complexity	1	70	(0)	2142174
32	3.0	0.0	0.0	chr2	160493445	160493478	(81700051)	+	(CGG)n	Simple_repeat	1	34	(0)	2143159
12	5.6	0.0	0.0	chr2	160493479	160493497	(81700032)	+	(TGC)n	Simple_repeat	1	19	(0)	2143160
71	2.9	0.0	0.0	chr2	160493522	160493593	(81699936)	+	(TCC)n	Simple_repeat	1	72	(0)	2143161
27	19.3	5.8	2.2	chr2	161238802	161238888	(80954641)	+	(CCCT)n	Simple_repeat	1	92	(0)	2144146
747	28.9	10.4	2.3	chr2	165691621	165692009	(76501520)	C	LTR16A	LTR/ERVL	(0)	451	28	2150009
898	25.2	0.0	1.8	chr2	165692081	165692302	(76501227)	C	ERV3-16A3_I-int	LTR/ERVL	(46)	5180	4963	2150010
15	17.9	0.0	4.8	chr2	165794145	165794186	(76399343)	+	(CTCCGC)n	Simple_repeat	1	42	(0)	2150134
10351	19.8	7.3	3.5	chr2	167330609	167332272	(74861257)	C	L1MA4A	LINE/L1	(4898)	1951	190	2152065
24	17.2	0.0	6.1	chr2	168247506	168247571	(73945958)	+	(CGC)n	Simple_repeat	1	66	(0)	2153274
17	26.2	4.0	2.5	chr2	168247582	168247671	(73945858)	+	GA-rich	Low_complexity	1	91	(0)	2153275
17	11.3	2.4	4.7	chr2	168247729	168247770	(73945759)	+	(CCGCTC)n	Simple_repeat	1	43	(0)	2153276
12	14.1	0.0	8.1	chr2	170716100	170716136	(71477393)	+	(GGTG)n	Simple_repeat	1	37	(0)	2157105
8754	17.4	10.8	2.5	chr2	172161440	172163359	(70030170)	C	MER52D	LTR/ERV1	(15)	2108	10	2159730
18	22.6	3.4	0.0	chr2	172342440	172342467	(69851062)	+	(CTCCCT)n	Simple_repeat	1	28	(0)	2160013
45	10.6	0.0	0.0	chr2	172342468	172342539	(69850990)	+	(CCT)n	Simple_repeat	1	72	(0)	2160014
18	22.6	3.4	0.0	chr2	172342540	172342573	(69850956)	+	(CTCCCT)n	Simple_repeat	3	36	(0)	2160015
14	20.2	4.3	2.0	chr2	173354872	173354918	(68838611)	+	(GCT)n	Simple_repeat	1	49	(0)	2161545
28	0.0	0.0	0.0	chr2	173964014	173964039	(68229490)	+	(CTC)n	Simple_repeat	1	26	(0)	2162454
12	10.3	6.1	2.9	chr2	173964100	173964132	(68229397)	+	(GCGG)n	Simple_repeat	1	35	(0)	2162455
34	27.1	0.8	2.5	chr2	173964209	173964388	(68229141)	+	G-rich	Low_complexity	1	176	(0)	2162456
35	18.5	6.0	3.2	chr2	173964709	173964825	(68228704)	+	(CCT)n	Simple_repeat	1	124	(0)	2162460
27	27.8	4.9	3.5	chr2	173964826	173964867	(68228662)	+	(CTCCCCT)n	Simple_repeat	4	170	(0)	2162461
12	17.1	2.9	2.8	chr2	173964835	173964869	(68228660)	+	(CGCT)n	Simple_repeat	1	36	(0)	2162462
23	15.6	3.2	4.6	chr2	175005224	175005286	(67188243)	+	(GGC)n	Simple_repeat	1	65	(0)	2164159
21	8.9	0.0	2.6	chr2	181892203	181892211	(60301318)	+	(CGAGGA)n	Simple_repeat	1	37	(0)	2173264
18	7.6	0.0	0.0	chr2	181892212	181892239	(60301290)	+	(AGG)n	Simple_repeat	1	28	(0)	2173265
12	19.7	4.7	2.2	chr2	183037942	183037984	(59155545)	+	(CCCGC)n	Simple_repeat	1	45	(0)	2174822
19	23.7	2.5	4.8	chr2	183038303	183038383	(59155146)	+	(CAGCCCC)n	Simple_repeat	1	83	(0)	2174823
16	26.1	3.4	0.0	chr2	186590241	186590299	(55603230)	+	G-rich	Low_complexity	1	61	(0)	2179278
18	20.2	3.9	0.0	chr2	186693990	186694040	(55499489)	+	(CTCCTC)n	Simple_repeat	1	53	(0)	2179447
13	18.3	2.6	2.5	chr2	186694092	186694138	(55499391)	+	(CGCCGCC)n	Simple_repeat	1	47	(0)	2179448
1194	18.6	14.1	0.4	chr2	188278566	188278823	(53914706)	C	AluSz	SINE/Alu	(12)	300	2	2181457
14	14.2	3.2	0.0	chr2	190343878	190343908	(51849621)	+	(CCT)n	Simple_repeat	1	32	(0)	2184207
19	18.4	4.5	4.3	chr2	190408282	190408366	(51785163)	+	(CCTCG)n	Simple_repeat	1	85	(0)	2184332
19	17.3	9.2	0.0	chr2	190408395	190408476	(51785053)	+	(CCGGCGCC)n	Simple_repeat	1	89	(0)	2184333
17	14.9	2.7	0.0	chr2	190408679	190408715	(51784814)	+	(CCTC)n	Simple_repeat	1	38	(0)	2184334
395	21.9	10.4	4.2	chr2	191019976	191020190	(51173339)	+	L1ME4a	LINE/L1	5819	6048	(76)	2185240
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
339	27.0	13.9	10.2	chr2	191245109	191245343	(50948186)	+	L1M4b	LINE/L1	411	655	(6212)	2185587
14	24.0	6.1	1.4	chr2	199458317	199458382	(42735147)	+	GA-rich	Low_complexity	1	70	(0)	2196848
12	11.6	3.3	3.2	chr2	199458751	199458780	(42734749)	+	(CCCA)n	Simple_repeat	1	31	(0)	2196849
13	24.2	1.9	3.8	chr2	199458829	199458880	(42734649)	+	(CCGCG)n	Simple_repeat	1	53	(0)	2196850
12	21.8	5.3	3.3	chr2	200509853	200509909	(41683620)	+	(GCCCGA)n	Simple_repeat	1	60	(0)	2198446
11	27.6	1.0	9.1	chr2	200509910	200509948	(41683581)	+	(CGGCCCG)n	Simple_repeat	3	99	(0)	2198447
20	11.8	0.0	2.6	chr2	200510168	200510206	(41683323)	+	(GCCAC)n	Simple_repeat	1	39	(0)	2198448
12	20.8	4.3	2.1	chr2	203534996	203535041	(38658488)	+	(GGAGGCG)n	Simple_repeat	1	48	(0)	2204167
46	0.0	0.0	0.0	chr2	203535259	203535300	(38658229)	+	(TGAC)n	Simple_repeat	1	42	(0)	2204168
33	12.7	1.6	1.6	chr2	203535304	203535365	(38658164)	+	(GGC)n	Simple_repeat	1	63	(0)	2204169
15	14.3	0.0	3.0	chr2	204545554	204545586	(37647943)	+	(CGC)n	Simple_repeat	1	33	(0)	2205785
29	7.2	2.3	0.0	chr2	204545612	204545655	(37647874)	+	(GCCAGG)n	Simple_repeat	1	45	(0)	2205786
326	23.5	13.1	4.0	chr2	204545685	204545808	(37647721)	C	L1MDb	LINE/L1	(5718)	691	555	2205787
20	17.6	2.2	0.0	chr2	207163398	207163442	(35030087)	+	GA-rich	Low_complexity	1	46	(0)	2209616
1556	5.7	13.0	6.2	chr2	207504242	207504484	(34689045)	+	L1PA13	LINE/L1	5901	6162	(1)	2210131
1187	9.4	0.6	2.4	chr2	207626385	207626587	(34566942)	C	AluSx	SINE/Alu	(0)	312	127	2210338
1773	13.6	1.7	6.7	chr2	208255695	208256010	(33937519)	C	AluJb	SINE/Alu	(10)	302	3	2211598
14	13.2	2.9	2.8	chr2	209771905	209771939	(32421590)	+	G-rich	Low_complexity	1	36	(0)	2213450
1180	19.5	12.7	0.7	chr2	211748319	211748602	(30444927)	+	L1MDb	LINE/L1	7	329	(6080)	2216023
14	12.0	0.0	3.3	chr2	211748693	211748722	(30444807)	+	A-rich	Low_complexity	1	30	(0)	2216024
284	33.2	5.1	2.0	chr2	211748737	211748985	(30444544)	C	Charlie7	DNA/hAT-Charlie	(1001)	1611	1355	2216025
41	2.4	0.0	0.0	chr2	213150456	213150497	(29043032)	+	(CCT)n	Simple_repeat	1	42	(0)	2217866
559	26.2	3.2	3.2	chr2	216306675	216306863	(25886666)	C	MIRb	SINE/MIR	(66)	202	14	2222500
21	4.0	0.0	0.0	chr2	216306979	216307004	(25886525)	+	(CA)n	Simple_repeat	1	26	(0)	2222501
17	14.2	0.0	0.0	chr2	216372298	216372328	(25821201)	+	(CCG)n	Simple_repeat	1	31	(0)	2222623
26	13.2	3.9	0.0	chr2	216603337	216603387	(25590142)	+	GA-rich	Low_complexity	1	53	(0)	2223085
487	16.2	3.5	13.0	chr2	216603475	216603666	(25589863)	C	MER112	DNA/hAT-Charlie	(0)	261	89	2223086
15	33.6	1.4	6.3	chr2	217789636	217789775	(24403754)	+	G-rich	Low_complexity	1	142	(0)	2224960
399	33.7	6.2	2.7	chr2	217918161	217918346	(24275183)	C	MIR	SINE/MIR	(57)	205	13	2225155
31	18.4	3.2	4.2	chr2	218003002	218003094	(24190435)	+	(CCT)n	Simple_repeat	1	96	(0)	2225315
12	12.4	5.1	4.9	chr2	218010374	218010412	(24183117)	+	(GCGGC)n	Simple_repeat	1	41	(0)	2225327
16	21.4	4.7	3.0	chr2	218010587	218010650	(24182879)	+	G-rich	Low_complexity	1	67	(0)	2225328
14	24.9	0.0	0.0	chr2	218010671	218010708	(24182821)	+	(GCG)n	Simple_repeat	1	38	(0)	2225329
36	2.7	0.0	0.0	chr2	224585163	224585200	(17608329)	+	(GCG)n	Simple_repeat	1	38	(0)	2236169
13	5.3	0.0	0.0	chr2	224585308	224585327	(17608202)	+	(GGC)n	Simple_repeat	1	20	(0)	2236170
22	9.4	0.0	0.0	chr2	224585356	224585389	(17608140)	+	(TCC)n	Simple_repeat	1	34	(0)	2236171
25	20.4	0.0	6.1	chr2	224585412	224585493	(17608036)	+	G-rich	Low_complexity	1	82	(0)	2236172
20	3.3	3.0	2.9	chr2	226799648	226799680	(15393849)	+	(CTC)n	Simple_repeat	1	34	(0)	2239468
317	30.7	14.9	6.8	chr2	227164586	227164910	(15028619)	+	L1M4b	LINE/L1	317	672	(6195)	2240010
9186	4.2	0.2	0.8	chr2	231375867	231376944	(10816585)	+	MER11C	LTR/ERVK	1	1071	(0)	2246766
16	18.1	0.0	9.8	chr2	231376964	231377024	(10816505)	+	GA-rich	Low_complexity	1	61	(0)	2246767
13	11.0	9.8	2.2	chr2	231662447	231662487	(10531042)	+	(CCGCT)n	Simple_repeat	1	45	(0)	2247398
14	16.9	0.0	2.9	chr2	231666540	231666574	(10526955)	+	G-rich	Low_complexity	1	35	(0)	2247403
22	17.3	0.0	2.1	chr2	231708583	231708630	(10484899)	+	(CGC)n	Simple_repeat	1	48	(0)	2247479
126	18.5	0.0	0.4	chr2	232333089	232333328	(9860201)	+	(CCT)n	Simple_repeat	1	240	(0)	2248510
13	27.2	3.1	3.0	chr2	232633534	232633598	(9559931)	+	(CCGC)n	Simple_repeat	1	67	(0)	2249014
21	12.8	6.2	4.3	chr2	232633636	232633700	(9559829)	+	(CGCGTCC)n	Simple_repeat	1	69	(0)	2249015
21	18.8	3.3	7.5	chr2	232633795	232633885	(9559644)	+	(GCCCGA)n	Simple_repeat	1	94	(0)	2249016
285	11.9	1.5	6.9	chr2	235301620	235302272	(6891257)	+	(CCT)n	Simple_repeat	1	663	(0)	2253359
2225	8.4	0.0	0.0	chr2	236177365	236177651	(6015878)	C	AluSz	SINE/Alu	(25)	287	1	2254622
260	23.0	3.9	0.0	chr2	236309756	236309829	(5883700)	C	MamTip3	DNA/hAT-Tip100	(422)	78	2	2254840
481	24.6	4.1	0.7	chr2	237674695	237674837	(4518692)	+	Charlie4a	DNA/hAT-Charlie	105	252	(256)	2256702
388	16.4	0.0	0.0	chr2	237675001	237675073	(4518456)	+	LTR50	LTR/ERVL	211	283	(512)	2256703
232	20.5	1.6	1.0	chr2	238964959	238965471	(3228058)	+	(CCTCCTT)n	Simple_repeat	1	521	(0)	2258441
13	4.1	3.5	6.7	chr2	239106566	239106594	(3086935)	+	(CTC)n	Simple_repeat	1	30	(0)	2258594
1388	29.8	8.8	5.3	chr2	239745769	239746543	(2446986)	+	L1MC5	LINE/L1	8232	9036	(268)	2259278
266	19.3	0.0	0.0	chr2	239746632	239746688	(2446841)	+	L1MC5	LINE/L1	9239	9295	(9)	2259279
12	13.9	0.0	0.0	chr2	239746691	239746714	(2446815)	+	(TTGT)n	Simple_repeat	1	24	(0)	2259280
48	2.1	0.0	0.0	chr2	240757409	240757456	(1436073)	+	(TCC)n	Simple_repeat	1	48	(0)	2260343
2366	13.0	1.6	1.9	chr2	240849133	240849508	(1344021)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2260459
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
333	33.8	2.9	0.0	chr2	241509180	241509312	(684217)	+	MIR	SINE/MIR	89	225	(37)	2261237
15	3.8	0.0	9.1	chr2	241558857	241558889	(634640)	+	(GGGCG)n	Simple_repeat	1	33	(0)	2261347
19	19.0	0.0	6.6	chr2	241701857	241701917	(491612)	+	(GCCCGCC)n	Simple_repeat	1	61	(0)	2261583
31	11.2	0.0	0.0	chr2	241776390	241776438	(417091)	+	(AGG)n	Simple_repeat	1	49	(0)	2261697
16	14.7	0.0	0.0	chr20	326410	326439	(64117728)	+	(CGA)n	Simple_repeat	1	30	(0)	2262667
17	15.4	2.8	0.0	chr20	326555	326590	(64117577)	+	(GCC)n	Simple_repeat	1	37	(0)	2262668
27	30.0	0.0	0.0	chr20	326590	326674	(64117493)	+	GA-rich	Low_complexity	1	85	(0)	2262669
433	21.7	6.6	1.4	chr20	652761	652896	(63791271)	C	MIR3	SINE/MIR	(36)	172	34	2263434
14	35.9	0.0	0.0	chr20	653096	653162	(63791005)	+	(GCCCG)n	Simple_repeat	1	67	(0)	2263435
305	29.1	2.7	6.2	chr20	2101420	2101593	(62342574)	C	MIRb	SINE/MIR	(69)	199	26	2266289
32	7.4	0.0	0.0	chr20	2652733	2652775	(61791392)	+	(GGGCCT)n	Simple_repeat	1	43	(0)	2267367
225	25.3	5.2	3.2	chr20	2653108	2653201	(61790966)	+	MER5A	DNA/hAT-Charlie	59	154	(35)	2267368
12	9.7	0.0	0.0	chr20	3739510	3739531	(60704636)	+	(CCTT)n	Simple_repeat	1	22	(0)	2269415
234	31.9	6.4	3.0	chr20	3816401	3816565	(60627602)	+	L2c	LINE/L2	3021	3191	(196)	2269554
533	14.9	7.3	1.0	chr20	4108632	4108733	(60335434)	+	MER5A	DNA/hAT-Charlie	3	111	(78)	2270147
229	29.3	7.6	5.0	chr20	4108864	4109003	(60335164)	+	L2	LINE/L2	2719	2862	(557)	2270148
14	20.2	1.7	6.8	chr20	4172526	4172583	(60271584)	+	GA-rich	Low_complexity	1	59	(0)	2270293
17	10.1	3.1	0.0	chr20	4172792	4172823	(60271344)	+	(GGTG)n	Simple_repeat	1	33	(0)	2270294
196	30.2	21.3	1.8	chr20	4924411	4924636	(59519531)	+	L2a	LINE/L2	2643	2924	(495)	2271566
521	13.4	2.4	0.0	chr20	5119169	5119250	(59324917)	+	FLAM_A	SINE/Alu	44	127	(15)	2272054
15	11.6	0.0	3.3	chr20	9067826	9067855	(55376312)	+	(GGA)n	Simple_repeat	1	30	(0)	2278344
13	26.5	1.6	4.6	chr20	10219528	10219591	(54224576)	+	G-rich	Low_complexity	1	65	(0)	2280188
18	19.5	2.7	6.7	chr20	10219592	10219597	(54224570)	+	(GCGG)n	Simple_repeat	4	75	(0)	2280189
68	4.2	0.0	0.0	chr20	13221213	13221286	(51222881)	+	(CCT)n	Simple_repeat	1	74	(0)	2284566
21	14.5	0.0	0.0	chr20	13221797	13221834	(51222333)	+	(GCT)n	Simple_repeat	1	38	(0)	2284567
39	0.0	0.0	0.0	chr20	18059395	18059430	(46384737)	+	(GGA)n	Simple_repeat	1	36	(0)	2292020
13	11.2	14.6	0.0	chr20	18138192	18138239	(46305928)	+	(TGCGGC)n	Simple_repeat	1	55	(0)	2292194
218	35.5	8.7	3.5	chr20	18360387	18360754	(46083413)	C	L2	LINE/L2	(476)	2943	2555	2292541
13	22.8	6.2	2.9	chr20	19212223	19212287	(45231880)	+	(CGCTGCT)n	Simple_repeat	1	69	(0)	2293797
28	19.1	3.0	0.0	chr20	19212421	19212512	(45231655)	+	(CCG)n	Simple_repeat	1	94	(0)	2293798
42	7.7	6.7	3.2	chr20	19758154	19758242	(44685925)	+	(CCT)n	Simple_repeat	1	95	(0)	2294579
44	0.0	0.0	0.0	chr20	21506666	21506703	(42937464)	+	(GT)n	Simple_repeat	1	38	(0)	2297195
32	26.9	4.2	2.7	chr20	22250545	22250686	(42193481)	+	GA-rich	Low_complexity	1	148	(0)	2298150
12	21.2	6.2	4.3	chr20	22584428	22584492	(41859675)	+	G-rich	Low_complexity	1	69	(0)	2298602
63	7.9	1.1	1.0	chr20	22584622	22584716	(41859451)	+	(GGA)n	Simple_repeat	1	96	(0)	2298603
16	17.8	9.0	2.7	chr20	22584853	22584919	(41859248)	+	(GCC)n	Simple_repeat	1	73	(0)	2298604
1726	19.3	4.1	0.3	chr20	23441452	23441783	(41002384)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	2299717
17	27.4	0.0	8.2	chr20	23858068	23858165	(40586002)	+	(TCCCCC)n	Simple_repeat	1	98	(0)	2300190
12	19.1	2.6	2.6	chr20	25058488	25058525	(39385642)	+	(GGCCCAG)n	Simple_repeat	1	39	(0)	2301647
378	23.6	5.4	2.7	chr20	25149032	25149195	(39294972)	+	MIRb	SINE/MIR	1	175	(93)	2301771
582	23.1	3.0	0.8	chr20	25356857	25356986	(39087181)	+	FLAM_C	SINE/Alu	1	133	(10)	2302021
16	22.7	4.2	4.0	chr20	25585610	25585681	(38858486)	+	G-rich	Low_complexity	1	75	(0)	2302423
406	18.5	1.9	6.8	chr20	26209717	26209878	(38234289)	C	FordPrefect	DNA/hAT-Tip100	(728)	955	802	2303450
709	22.3	13.1	3.7	chr20	31920061	31920229	(32523938)	+	MIR	SINE/MIR	22	209	(53)	2307190
15	11.7	0.0	0.0	chr20	31968008	31968035	(32476132)	+	(GGCGG)n	Simple_repeat	1	28	(0)	2307303
22	11.5	2.6	0.0	chr20	31968059	31968097	(32476070)	+	(GGA)n	Simple_repeat	1	40	(0)	2307304
25	29.5	0.0	0.0	chr20	32189867	32189944	(32254223)	+	(CCT)n	Simple_repeat	1	78	(0)	2307868
16	19.2	4.1	2.0	chr20	32585205	32585253	(31858914)	+	G-rich	Low_complexity	1	51	(0)	2308741
22	28.1	0.0	0.0	chr20	32585320	32585396	(31858771)	+	(CTC)n	Simple_repeat	1	77	(0)	2308742
17	8.9	5.3	2.5	chr20	32585468	32585505	(31858662)	+	(GCCCG)n	Simple_repeat	1	40	(0)	2308743
43	0.0	0.0	0.0	chr20	32676125	32676161	(31768006)	+	(AC)n	Simple_repeat	1	37	(0)	2308985
460	24.0	9.3	2.4	chr20	32743631	32743826	(31700341)	+	MIRb	SINE/MIR	46	267	(1)	2309172
17	8.5	2.3	6.8	chr20	33667260	33667302	(30776865)	+	G-rich	Low_complexity	1	44	(0)	2311305
11	21.1	2.5	2.4	chr20	33667534	33667573	(30776594)	+	(GGCGCG)n	Simple_repeat	1	41	(0)	2311306
13	31.4	1.2	4.7	chr20	34997262	34997346	(29446821)	+	(GGAGCT)n	Simple_repeat	1	86	(0)	2314307
13	12.1	5.0	4.8	chr20	35601756	35601795	(28842372)	+	G-rich	Low_complexity	1	42	(0)	2315649
16	16.9	0.0	4.5	chr20	36173597	36173640	(28270527)	+	(CCTCCCT)n	Simple_repeat	1	44	(0)	2317028
2623	4.1	0.0	2.8	chr20	36383694	36384013	(28060154)	+	AluYk3	SINE/Alu	1	311	(0)	2317490
522	25.7	0.7	1.4	chr20	36384407	36384548	(28059619)	C	MIR	SINE/MIR	(26)	236	96	2317491
17	26.8	1.4	4.1	chr20	36461263	36461334	(27982833)	+	(GGCC)n	Simple_repeat	1	73	(0)	2317683
15	7.8	0.0	3.5	chr20	36461410	36461438	(27982729)	+	(GGGGC)n	Simple_repeat	1	29	(0)	2317684
27	28.0	1.0	2.9	chr20	36461591	36461691	(27982476)	+	(GCCCG)n	Simple_repeat	1	102	(0)	2317685
20	13.4	0.0	4.4	chr20	36863794	36863838	(27580329)	+	GA-rich	Low_complexity	1	45	(0)	2318641
14	10.5	6.5	0.0	chr20	36863902	36863932	(27580235)	+	(CCT)n	Simple_repeat	1	33	(0)	2318642
195	29.3	8.3	6.2	chr20	36865564	36865774	(27578393)	C	L2b	LINE/L2	(18)	3357	3142	2318644
28	18.4	0.9	9.7	chr20	37345991	37346102	(27098065)	+	(TCC)n	Simple_repeat	1	113	(0)	2319802
12	13.0	11.9	0.0	chr20	37346084	37346125	(27098042)	+	(CTCTCT)n	Simple_repeat	1	47	(0)	2319803
17	34.2	2.4	0.0	chr20	37346169	37346252	(27097915)	+	(CCGT)n	Simple_repeat	1	86	(0)	2319804
287	35.0	0.0	0.8	chr20	37438071	37438194	(27005973)	C	L1ME3G	LINE/L1	(0)	924	802	2320040
224	20.8	4.0	0.0	chr20	37627081	37627128	(26817039)	+	MIR3	SINE/MIR	152	201	(7)	2320432
23	2.3	3.8	9.1	chr20	37903028	37903080	(26541087)	+	GA-rich	Low_complexity	1	55	(0)	2321017
26	21.7	2.4	3.5	chr20	37903169	37903253	(26540914)	+	G-rich	Low_complexity	1	87	(0)	2321018
221	23.9	1.8	10.2	chr20	37939691	37939792	(26504375)	+	L2c	LINE/L2	3284	3386	(1)	2321116
12	15.2	2.4	7.0	chr20	37939854	37939895	(26504272)	+	(CCTC)n	Simple_repeat	1	43	(0)	2321117
119	20.4	3.9	2.6	chr20	39111486	39111818	(25332349)	+	GA-rich	Low_complexity	1	346	(0)	2323531
46	2.2	0.0	2.1	chr20	43102278	43102325	(21341842)	+	(CA)n	Simple_repeat	1	48	(0)	2330442
664	26.0	3.0	2.0	chr20	43102711	43102910	(21341257)	+	LTR16E1	LTR/ERVL	336	537	(1)	2330443
5819	15.4	12.7	2.6	chr20	43720990	43722132	(20722035)	C	MER52C	LTR/ERV1	(0)	1278	4	2331823
273	32.2	5.5	3.9	chr20	44646328	44646505	(19797662)	C	MamTip2	DNA/hAT-Tip100	(66)	239	59	2333978
409	31.1	10.1	1.3	chr20	44646549	44646773	(19797394)	C	MIRb	SINE/MIR	(21)	247	1	2333979
187	29.3	0.0	7.1	chr20	44701243	44701341	(19742826)	+	L2b	LINE/L2	2995	3086	(289)	2334126
376	32.1	10.3	0.0	chr20	44701437	44701601	(19742566)	+	MIR	SINE/MIR	4	187	(75)	2334127
291	12.8	1.1	3.0	chr20	45305334	45305401	(19138766)	C	MIR3	SINE/MIR	(62)	146	82	2335355
16	16.3	0.0	8.8	chr20	45406547	45406603	(19037564)	+	(CCCGCCT)n	Simple_repeat	1	57	(0)	2335583
16	16.9	1.9	5.7	chr20	45824131	45824182	(18619985)	+	G-rich	Low_complexity	1	53	(0)	2336296
30	0.0	7.7	0.0	chr20	45834377	45834415	(18609752)	+	(CGAGGACGA)n	Simple_repeat	1	42	(0)	2336327
12	22.0	2.7	0.0	chr20	45934710	45934746	(18509421)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	2336591
13	32.3	1.6	0.0	chr20	45935022	45935085	(18509082)	+	(CCTCCG)n	Simple_repeat	1	65	(0)	2336592
232	28.2	9.0	0.0	chr20	46013858	46013928	(18430239)	C	MER91A	DNA/hAT-Tip100	(3)	193	116	2336782
71	5.6	1.1	0.0	chr20	46022940	46023034	(18421133)	+	(GAG)n	Simple_repeat	1	96	(0)	2336808
249	22.4	1.7	1.7	chr20	46023120	46023178	(18420989)	C	MIR3	SINE/MIR	(37)	171	113	2336809
274	24.1	10.8	4.9	chr20	46207003	46207124	(18237043)	+	L2b	LINE/L2	3233	3362	(13)	2337180
1080	28.3	3.0	2.5	chr20	47501131	47501489	(16942678)	C	L1MC4	LINE/L1	(460)	7582	7222	2340294
319	22.9	22.4	0.0	chr20	47501517	47501634	(16942533)	+	MIR	SINE/MIR	111	262	(0)	2340295
17	25.9	6.0	1.1	chr20	49277930	49278013	(15166154)	+	G-rich	Low_complexity	1	89	(0)	2344005
11	26.9	4.1	0.0	chr20	49278136	49278158	(15166009)	+	(GGCGGA)n	Simple_repeat	1	50	(0)	2344006
13	13.2	0.0	0.0	chr20	49278159	49278183	(15165984)	+	(GAG)n	Simple_repeat	1	25	(0)	2344007
11	18.1	2.4	4.8	chr20	49483434	49483474	(14960693)	+	(TCCTCC)n	Simple_repeat	1	42	(0)	2344538
63	8.7	0.0	0.0	chr20	49483476	49483562	(14960605)	+	(CTC)n	Simple_repeat	1	87	(0)	2344539
458	29.2	10.4	5.3	chr20	49484492	49484737	(14959430)	C	L2a	LINE/L2	(1)	3425	3166	2344540
15	22.5	0.0	2.3	chr20	49631619	49631661	(14812506)	+	(CCT)n	Simple_repeat	1	43	(0)	2344942
180	35.5	4.4	1.9	chr20	49631821	49631975	(14812192)	+	L2c	LINE/L2	2410	2568	(851)	2344943
191	32.0	8.1	2.3	chr20	50154234	50154361	(14289806)	C	L2b	LINE/L2	(29)	3346	3211	2346211
235	30.7	2.6	0.0	chr20	50154371	50154445	(14289722)	C	MIRb	SINE/MIR	(15)	253	177	2346212
449	28.3	9.9	0.4	chr20	50154453	50154701	(14289466)	+	L2b	LINE/L2	3132	3425	(1)	2346213
2600	29.2	14.1	2.9	chr20	50559286	50560592	(13883575)	C	HAL1	LINE/L1	(869)	1638	119	2347215
774	27.6	11.6	1.4	chr20	50788258	50788544	(13655623)	+	MER46C	DNA/TcMar-Tigger	9	328	(10)	2347736
1633	15.0	0.0	0.4	chr20	50789024	50789277	(13654890)	C	AluJb	SINE/Alu	(13)	299	47	2347737
274	31.9	5.8	2.6	chr20	51307089	51307204	(13136963)	C	MIRb	SINE/MIR	(6)	262	143	2348864
13	5.2	0.0	0.0	chr20	51802331	51802350	(12641817)	+	(CTG)n	Simple_repeat	1	20	(0)	2349940
954	13.1	1.4	0.0	chr20	52105436	52105580	(12338587)	+	MER5A1	DNA/hAT-Charlie	16	162	(4)	2350768
46	19.3	0.7	0.0	chr20	52972406	52972558	(11471609)	+	(TG)n	Simple_repeat	1	154	(0)	2352542
57	13.9	1.0	0.0	chr20	52972696	52972792	(11471375)	+	(GAG)n	Simple_repeat	1	98	(0)	2352543
15	9.5	0.0	9.5	chr20	53658070	53658112	(10786055)	+	A-rich	Low_complexity	1	38	(0)	2353984
34	6.4	0.0	3.7	chr20	54475553	54475606	(9968561)	+	(TCC)n	Simple_repeat	1	54	(0)	2355762
17	4.3	0.0	0.0	chr20	57266660	57266683	(7177484)	+	(GGA)n	Simple_repeat	1	24	(0)	2360863
188	30.0	8.9	2.5	chr20	57266788	57267022	(7177145)	C	L2c	LINE/L2	(10)	3365	3115	2360864
310	34.7	12.9	1.4	chr20	58619581	58619855	(5824312)	C	L2a	LINE/L2	(5)	3421	3111	2363249
608	24.2	2.1	4.1	chr20	58619898	58620091	(5824076)	C	MIR	SINE/MIR	(13)	249	60	2363250
39	30.6	1.0	1.0	chr20	58890122	58890238	(5553929)	+	GA-rich	Low_complexity	1	117	(0)	2363580
28	30.9	1.1	0.0	chr20	58890245	58890337	(5553830)	+	(GCC)n	Simple_repeat	1	94	(0)	2363581
449	27.9	13.8	5.0	chr20	60057950	60058345	(4385822)	C	L2b	LINE/L2	(0)	3375	2940	2365424
839	13.7	0.0	6.1	chr20	60715062	60715192	(3728975)	C	AluJr	SINE/Alu	(189)	123	1	2366368
298	25.2	12.2	0.0	chr20	60715526	60715676	(3728491)	+	LTR16	LTR/ERVL	242	413	(25)	2366369
615	27.6	8.8	2.5	chr20	60786629	60786889	(3657278)	+	LTR16A	LTR/ERVL	56	334	(117)	2366464
31	6.3	0.0	5.4	chr20	60786890	60786945	(3657222)	+	(CCT)n	Simple_repeat	1	56	(0)	2366465
615	27.6	8.8	2.5	chr20	60786946	60786969	(3657198)	+	LTR16A	LTR/ERVL	335	360	(91)	2366464
70	22.3	3.2	3.5	chr20	60786971	60787189	(3656978)	+	(TCC)n	Simple_repeat	1	226	(0)	2366466
417	23.0	6.0	0.8	chr20	62409820	62409946	(2034221)	C	MER5A	DNA/hAT-Charlie	(5)	184	51	2368525
22	18.5	3.6	0.0	chr20	62428430	62428484	(2015683)	+	(CCTCCG)n	Simple_repeat	1	57	(0)	2368550
16	21.6	5.9	2.8	chr20	62804696	62804763	(1639404)	+	G-rich	Low_complexity	1	72	(0)	2368970
29	27.8	0.9	3.5	chr20	62804889	62805000	(1639167)	+	GA-rich	Low_complexity	1	113	(0)	2368971
17	5.4	2.1	10.2	chr20	63154452	63154499	(1289668)	+	GA-rich	Low_complexity	1	49	(0)	2369323
149	13.7	5.8	1.4	chr20	63154637	63154964	(1289203)	+	(CCTCCCT)n	Simple_repeat	1	347	(0)	2369324
1112	23.5	14.2	0.0	chr20	63261780	63262128	(1182039)	C	MLT1A1	LTR/ERVL-MaLR	(1)	407	1	2369431
17	16.5	0.0	0.0	chr20	63361109	63361142	(1083025)	+	(CAG)n	Simple_repeat	1	34	(0)	2369511
23	23.9	1.6	8.5	chr20	63362305	63362431	(1081736)	+	(CCTCC)n	Simple_repeat	1	129	(0)	2369513
81	21.6	1.4	3.2	chr20	63653429	63653646	(790521)	+	G-rich	Low_complexity	1	221	(0)	2369848
193	21.2	0.0	0.0	chr20	63846951	63847337	(596830)	+	(CA)n	Simple_repeat	1	387	(0)	2370123
2298	9.7	0.0	1.0	chr20	63864482	63864792	(579375)	+	AluSq2	SINE/Alu	6	313	(0)	2370148
22	22.0	2.3	5.6	chr20	64083732	64083819	(360348)	+	(CGCCC)n	Simple_repeat	1	90	(0)	2370491
539	26.9	6.4	3.0	chr20	64179245	64179528	(264639)	C	L1MB7	LINE/L1	(344)	7538	7209	2370572
302	25.0	12.1	0.0	chr20	64179534	64179649	(264518)	C	L1MB7	LINE/L1	(973)	7069	6938	2370572
1519	15.3	7.5	6.1	chr21	14842179	14842569	(31867414)	C	LTR1A2	LTR/ERV1	(440)	397	1	2378361
27	3.5	0.0	0.0	chr21	15730357	15730386	(30979597)	+	(CGC)n	Simple_repeat	1	30	(0)	2379541
48	25.4	1.1	5.1	chr21	17510287	17510462	(29199521)	+	(TCC)n	Simple_repeat	1	178	(0)	2381766
16	20.2	5.5	1.7	chr21	17510409	17510463	(29199520)	+	(TTCTTCT)n	Simple_repeat	1	58	(0)	2381767
12	16.6	0.0	0.0	chr21	17819157	17819183	(28890800)	+	(GTCC)n	Simple_repeat	1	27	(0)	2382241
147	16.4	3.4	0.0	chr21	25373568	25373859	(21336124)	+	(TCC)n	Simple_repeat	1	302	(0)	2392403
14	14.0	2.1	8.2	chr21	26844279	26844326	(19865657)	+	(CTTCGT)n	Simple_repeat	1	49	(0)	2394581
340	31.5	3.5	0.0	chr21	31732809	31732919	(14977064)	C	L2c	LINE/L2	(24)	3363	3249	2401956
709	22.8	15.0	6.9	chr21	32185232	32185650	(14524333)	+	LTR79	LTR/ERVL	69	527	(0)	2402799
4087	6.1	1.0	0.2	chr21	32577709	32578216	(14131767)	C	MER9a3	LTR/ERVK	(0)	512	1	2403459
14	22.1	2.0	3.9	chr21	32727802	32727852	(13982131)	+	(CTCCCG)n	Simple_repeat	1	52	(0)	2403671
38	8.0	0.0	0.0	chr21	33070371	33070423	(13639560)	+	(CCT)n	Simple_repeat	1	53	(0)	2404252
18	21.7	3.2	3.1	chr21	33070542	33070603	(13639380)	+	(AGC)n	Simple_repeat	1	64	(0)	2404253
46	14.0	1.6	7.6	chr21	33157371	33157499	(13552484)	+	(CTCCTC)n	Simple_repeat	1	131	(0)	2404406
1478	22.3	12.1	8.2	chr21	36990585	36991247	(9718736)	C	MER21C	LTR/ERVL	(130)	808	18	2410806
19	11.9	4.1	3.9	chr21	37368074	37368122	(9341861)	+	G-rich	Low_complexity	1	51	(0)	2411475
304	21.2	23.4	1.5	chr21	37446597	37446760	(9263223)	C	MIRc	SINE/MIR	(19)	249	54	2411610
133	16.3	2.9	6.2	chr21	37712436	37712812	(8997171)	+	(TCCTCCC)n	Simple_repeat	1	388	(0)	2412013
45	11.3	2.1	4.2	chr21	38660991	38661083	(8048900)	+	GA-rich	Low_complexity	1	95	(0)	2413293
60	22.7	2.3	5.4	chr21	38805637	38805854	(7904129)	+	(CCCCT)n	Simple_repeat	1	223	(0)	2413543
28	3.3	0.0	0.0	chr21	38805860	38805890	(7904093)	+	(TCCCTCC)n	Simple_repeat	1	31	(0)	2413544
17	20.9	4.7	3.0	chr21	41684453	41684516	(5025467)	+	G-rich	Low_complexity	1	67	(0)	2417859
15	19.8	4.8	4.5	chr21	41712192	41712254	(4997729)	+	GA-rich	Low_complexity	1	66	(0)	2417908
265	28.6	8.1	5.7	chr21	41712471	41712663	(4997320)	+	LTR33A_	LTR/ERVL	216	413	(118)	2417909
76	16.9	4.4	3.3	chr21	41726411	41726613	(4983370)	+	(CTTCCT)n	Simple_repeat	1	212	(0)	2417936
247	28.2	11.9	5.7	chr21	41971486	41971685	(4738298)	+	L4_C_Mam	LINE/RTE-X	4536	4748	(390)	2418251
17	12.6	2.9	0.0	chr21	43776445	43776479	(2933504)	+	G-rich	Low_complexity	1	36	(0)	2420779
241	30.8	14.7	2.2	chr21	44078549	44078684	(2631299)	C	MIR3	SINE/MIR	(26)	182	27	2421293
985	16.0	0.0	1.9	chr21	44078799	44078954	(2631029)	+	FRAM	SINE/Alu	3	155	(21)	2421294
252	33.6	0.8	6.9	chr21	44079117	44079247	(2630736)	+	MIRb	SINE/MIR	37	159	(109)	2421295
18	13.6	4.9	0.0	chr21	44299576	44299616	(2410367)	+	G-rich	Low_complexity	1	43	(0)	2421590
2197	11.3	3.2	0.0	chr21	44895560	44895859	(1814124)	+	AluSq2	SINE/Alu	1	310	(3)	2422292
33	7.1	4.9	1.6	chr21	44895862	44895923	(1814060)	+	(AAATA)n	Simple_repeat	1	64	(0)	2422293
253	29.0	11.6	0.0	chr21	44896135	44896241	(1813742)	C	MER63D	DNA/hAT-Blackjack	(705)	356	236	2422294
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
20	22.7	0.0	3.3	chr21	44940122	44940181	(1769802)	+	(CCGGCC)n	Simple_repeat	1	60	(0)	2422350
30	13.1	0.0	0.0	chr21	45414038	45414087	(1295896)	+	(GGA)n	Simple_repeat	1	50	(0)	2422839
1636	26.4	9.1	1.6	chr21	45810565	45811162	(898821)	C	L1M4a1	LINE/L1	(2368)	3951	3296	2423216
684	25.1	16.3	1.2	chr21	45811195	45811543	(898440)	C	MLT1E2	LTR/ERVL-MaLR	(30)	475	74	2423220
1553	27.4	13.5	10.1	chr21	45811552	45812183	(897800)	C	L1M4a1	LINE/L1	(3690)	2629	1908	2423216
203	30.6	6.7	0.0	chr21	45943637	45943747	(766236)	C	L2a	LINE/L2	(255)	3171	3053	2423344
29	19.6	4.8	4.6	chr21	45977211	45977314	(732669)	+	(CCT)n	Simple_repeat	1	109	(0)	2423386
225	31.5	5.3	2.7	chr21	46323406	46323552	(386431)	C	MER4E	LTR/ERV1	(153)	613	463	2423810
235	22.1	3.4	5.5	chr21	46323663	46323753	(386230)	+	LTR16A	LTR/ERVL	135	223	(228)	2423811
78	15.7	2.3	2.9	chr21	46423695	46423865	(286118)	+	G-rich	Low_complexity	1	175	(0)	2423936
15	4.8	0.0	0.0	chr22	19291658	19291679	(31526789)	+	(CGG)n	Simple_repeat	1	22	(0)	2431742
72	16.6	2.3	3.4	chr22	19291736	19291908	(31526560)	+	(TGCCCC)n	Simple_repeat	1	177	(0)	2431743
1092	27.0	13.8	6.8	chr22	19667183	19667217	(31151251)	C	MLT1F2	LTR/ERVL-MaLR	(1)	559	525	2432396
5563	10.4	3.6	3.4	chr22	19667218	19668050	(31150418)	+	LTR1A2	LTR/ERV1	3	837	(0)	2432397
20	22.0	4.7	4.4	chr22	19724293	19724378	(31094090)	+	(GCT)n	Simple_repeat	1	90	(0)	2432484
16	19.9	0.0	2.4	chr22	20704086	20704127	(30114341)	+	(CCCCTC)n	Simple_repeat	1	42	(0)	2433785
12	22.2	7.7	0.0	chr22	20704302	20704353	(30114115)	+	(GCCGCT)n	Simple_repeat	1	56	(0)	2433786
14	17.6	0.0	0.0	chr22	21629314	21629345	(29189123)	+	(GCACGT)n	Simple_repeat	1	32	(0)	2435563
16	30.1	0.0	4.0	chr22	21921343	21921416	(28897052)	+	(CCCTG)n	Simple_repeat	1	74	(0)	2436224
17	22.4	1.8	3.5	chr22	23533397	23533452	(27285016)	+	GA-rich	Low_complexity	1	57	(0)	2438457
258	20.7	0.0	0.7	chr22	23566056	23566129	(27252339)	C	MIRc	SINE/MIR	(91)	171	99	2438498
16	30.0	0.0	1.8	chr22	23786986	23787041	(27031427)	+	(GGC)n	Simple_repeat	1	56	(0)	2438970
15	18.7	0.0	10.4	chr22	23787102	23787168	(27031300)	+	(CCCCGC)n	Simple_repeat	1	67	(0)	2438971
14	22.3	0.0	4.3	chr22	23787357	23787402	(27031066)	+	G-rich	Low_complexity	1	46	(0)	2438972
12	20.8	0.0	2.9	chr22	23895552	23895586	(26922882)	+	GA-rich	Low_complexity	1	35	(0)	2439165
192	31.8	3.1	3.1	chr22	24695752	24695913	(26122555)	+	L2	LINE/L2	2729	2890	(529)	2440486
49	20.8	0.0	0.9	chr22	24696137	24696241	(26122227)	+	(CCT)n	Simple_repeat	1	105	(0)	2440487
36	12.1	1.5	1.5	chr22	25564572	25564636	(25253832)	+	GA-rich	Low_complexity	1	66	(0)	2442496
1407	23.4	12.8	6.7	chr22	25935073	25935643	(24882825)	C	LTR36	LTR/ERV1	(0)	611	1	2443194
208	34.8	2.8	0.0	chr22	26023304	26023372	(24795096)	C	L2b	LINE/L2	(8)	3367	3297	2443400
45	1.7	1.5	5.9	chr22	26023469	26023535	(24794933)	+	(TCC)n	Simple_repeat	1	68	(0)	2443401
12	23.1	5.1	3.2	chr22	26657361	26657419	(24161049)	+	G-rich	Low_complexity	1	62	(0)	2444877
189	31.5	0.0	10.7	chr22	26658902	26659022	(24159446)	C	MIRc	SINE/MIR	(39)	229	122	2444879
271	24.6	8.3	10.9	chr22	27417042	27417251	(23401217)	+	L2b	LINE/L2	2961	3164	(223)	2446644
27	29.1	6.4	1.8	chr22	27543503	27543658	(23274810)	+	(CCTT)n	Simple_repeat	1	166	(0)	2446931
471	30.7	2.8	1.6	chr22	27543661	27543918	(23274550)	+	L2b	LINE/L2	2929	3188	(199)	2446932
25	9.8	0.0	4.2	chr22	29031030	29031077	(21787391)	+	(CCCTGC)n	Simple_repeat	1	48	(0)	2449755
511	22.8	1.6	0.8	chr22	30238924	30239051	(20579417)	C	MER5A1	DNA/hAT-Charlie	(6)	160	32	2452220
16	16.0	7.0	0.0	chr22	30246294	30246336	(20572132)	+	A-rich	Low_complexity	1	46	(0)	2452227
32	8.3	1.9	1.8	chr22	30246390	30246443	(20572025)	+	(GGA)n	Simple_repeat	1	55	(0)	2452228
14	12.5	0.0	3.5	chr22	30256293	30256321	(20562147)	+	GA-rich	Low_complexity	1	29	(0)	2452244
323	27.5	13.8	1.9	chr22	30256392	30256543	(20561925)	C	MIRb	SINE/MIR	(72)	196	26	2452245
2394	7.4	1.3	0.3	chr22	30411464	30411761	(20406707)	+	AluSz	SINE/Alu	1	301	(11)	2452553
462	31.4	13.1	4.4	chr22	30411762	30412096	(20406372)	C	L2c	LINE/L2	(82)	3305	2920	2452552
16	7.8	0.0	3.5	chr22	30802854	30802882	(20015586)	+	(GGCG)n	Simple_repeat	1	29	(0)	2453437
21	17.4	2.2	0.0	chr22	30803073	30803118	(20015350)	+	(GCG)n	Simple_repeat	1	47	(0)	2453438
368	29.6	4.9	2.9	chr22	31211893	31212031	(19606437)	+	MIR3	SINE/MIR	20	161	(47)	2454270
14	16.4	2.9	0.0	chr22	31212128	31212161	(19606307)	+	(GCCAGA)n	Simple_repeat	1	35	(0)	2454271
13	21.7	3.4	4.9	chr22	31212162	31212220	(19606248)	+	G-rich	Low_complexity	1	61	(0)	2454272
272	29.9	3.0	8.0	chr22	31347732	31347869	(19470599)	+	MIRc	SINE/MIR	45	175	(93)	2454550
36	8.5	0.0	0.0	chr22	33052387	33052437	(17766031)	+	(TCC)n	Simple_repeat	1	51	(0)	2458281
254	31.0	10.1	11.7	chr22	33900483	33900592	(16917876)	C	MIRc	SINE/MIR	(34)	234	117	2460013
1526	21.4	3.9	9.3	chr22	33900593	33900764	(16917704)	+	MLT1C	LTR/ERVL-MaLR	1	182	(285)	2460014
289	30.6	6.5	4.8	chr22	33915796	33915960	(16902508)	+	L2c	LINE/L2	2954	3121	(266)	2460041
2505	7.8	0.0	0.0	chr22	33916003	33916309	(16902159)	+	AluSg4	SINE/Alu	3	309	(1)	2460042
415	25.1	4.7	3.7	chr22	35467599	35467734	(15350734)	C	L1ME1	LINE/L1	(2)	6162	6015	2463075
248	29.3	8.9	2.4	chr22	35492379	35492504	(15325964)	+	L2c	LINE/L2	3016	3150	(225)	2463134
205	33.2	10.6	1.0	chr22	36573818	36574012	(14244456)	C	L2b	LINE/L2	(214)	3161	2946	2465378
851	31.2	7.4	5.8	chr22	36573985	36574500	(14243968)	C	L2	LINE/L2	(409)	3010	2484	2465379
73	1.5	0.0	0.0	chr22	36703761	36703827	(14114641)	+	(CT)n	Simple_repeat	1	67	(0)	2465663
339	23.8	11.9	1.6	chr22	37016793	37016920	(13801548)	+	MIRc	SINE/MIR	7	149	(119)	2466318
228	35.5	7.3	3.8	chr22	37017086	37017243	(13801225)	+	L3	LINE/CR1	3932	4095	(4)	2466319
34	22.9	0.0	0.0	chr22	37060820	37060904	(13757564)	+	GA-rich	Low_complexity	1	85	(0)	2466427
223	29.2	5.3	2.2	chr22	37064024	37064114	(13754354)	C	MER5A	DNA/hAT-Charlie	(22)	167	74	2466434
469	36.0	7.2	6.0	chr22	37303920	37304333	(13514135)	C	L2c	LINE/L2	(35)	3352	2934	2466941
2269	11.6	0.0	0.0	chr22	37336263	37336573	(13481895)	+	AluSx1	SINE/Alu	1	311	(1)	2467015
232	22.2	0.0	1.8	chr22	37342408	37342462	(13476006)	C	L2c	LINE/L2	(298)	3089	3036	2467028
349	28.1	8.0	4.1	chr22	37350927	37351071	(13467397)	+	MIR3	SINE/MIR	33	183	(25)	2467045
49	17.9	4.1	5.7	chr22	37351120	37351289	(13467179)	+	(CCCTCCT)n	Simple_repeat	1	177	(0)	2467046
228	30.1	0.0	6.1	chr22	37429012	37429110	(13389358)	+	L2c	LINE/L2	3264	3356	(31)	2467214
230	23.8	4.5	0.0	chr22	37429394	37429456	(13389012)	+	MIRc	SINE/MIR	99	164	(104)	2467215
11	14.0	0.0	8.1	chr22	37675389	37675425	(13143043)	+	(GGAGAT)n	Simple_repeat	1	37	(0)	2467797
260	36.2	7.9	0.0	chr22	38318136	38318251	(12500217)	+	MIRc	SINE/MIR	58	183	(85)	2469246
243	26.9	6.8	4.6	chr22	38318491	38318608	(12499860)	C	MIR3	SINE/MIR	(8)	200	79	2469247
28	6.8	0.0	5.8	chr22	38336245	38336296	(12482172)	+	(CCCGC)n	Simple_repeat	1	52	(0)	2469301
219	26.0	5.2	6.8	chr22	38353593	38353769	(12464699)	+	MIRc	SINE/MIR	22	199	(69)	2469343
266	30.8	10.3	5.1	chr22	38657204	38657340	(12161128)	+	MIRc	SINE/MIR	124	268	(0)	2470030
285	33.3	10.6	1.4	chr22	38657308	38657453	(12161015)	C	MIR	SINE/MIR	(80)	188	28	2470031
220	28.8	8.1	0.0	chr22	38657618	38657697	(12160771)	+	MIRb	SINE/MIR	132	218	(50)	2470028
693	20.8	16.5	0.0	chr22	38834922	38835123	(11983345)	+	MIR	SINE/MIR	2	243	(19)	2470372
12	23.6	2.0	4.0	chr22	38982552	38982600	(11835868)	+	(CCCCT)n	Simple_repeat	1	50	(0)	2470650
11	21.4	4.4	2.1	chr22	38987243	38987287	(11831181)	+	(CTGGCC)n	Simple_repeat	1	47	(0)	2470658
1650	17.1	0.4	1.8	chr22	39017367	39017646	(11800822)	+	AluJb	SINE/Alu	12	287	(25)	2470721
16	18.1	4.3	2.1	chr22	39017707	39017758	(11800710)	+	(CTC)n	Simple_repeat	1	53	(0)	2470722
13	18.1	5.3	0.0	chr22	39097408	39097445	(11721023)	+	(GCCCCA)n	Simple_repeat	1	40	(0)	2470870
207	32.0	1.9	1.0	chr22	39099454	39099557	(11718911)	C	L2	LINE/L2	(952)	2467	2363	2470875
2433	8.1	0.0	0.0	chr22	39099891	39100187	(11718281)	+	AluSx1	SINE/Alu	1	297	(15)	2470876
2225	10.6	0.3	0.7	chr22	39170532	39170833	(11647635)	C	AluSq	SINE/Alu	(12)	301	1	2471046
203	27.9	1.6	4.7	chr22	39171303	39171366	(11647102)	C	MIR	SINE/MIR	(193)	69	8	2471047
380	32.2	2.1	0.0	chr22	39171388	39171530	(11646938)	C	MIR3	SINE/MIR	(53)	155	10	2471048
583	30.0	6.1	1.2	chr22	39172373	39172608	(11645860)	+	MIRb	SINE/MIR	17	256	(6)	2471049
38	0.0	0.0	0.0	chr22	39558969	39559001	(11259467)	+	(GT)n	Simple_repeat	1	33	(0)	2471897
13	15.9	0.0	0.0	chr22	39559002	39559029	(11259439)	+	GA-rich	Low_complexity	1	28	(0)	2471898
202	35.1	6.4	2.2	chr22	39624628	39624761	(11193707)	C	MIR3	SINE/MIR	(8)	200	61	2472051
12	12.6	0.0	3.6	chr22	40370878	40370905	(10447563)	+	G-rich	Low_complexity	1	28	(0)	2473431
2360	8.5	0.3	0.3	chr22	41413149	41413454	(9405014)	+	AluSp	SINE/Alu	1	306	(7)	2475854
26	20.5	0.0	0.0	chr22	41413576	41413631	(9404837)	+	GA-rich	Low_complexity	1	56	(0)	2475855
2204	6.9	0.3	3.1	chr22	41957182	41957500	(8860968)	C	AluY	SINE/Alu	(0)	311	1	2477138
196	25.9	1.1	14.4	chr22	41957507	41957610	(8860858)	+	MIR3	SINE/MIR	86	175	(33)	2477139
16	6.7	2.9	5.6	chr22	41957929	41957963	(8860505)	+	(CGCC)n	Simple_repeat	1	36	(0)	2477140
14	5.0	0.0	0.0	chr22	41978773	41978793	(8839675)	+	(GAAT)n	Simple_repeat	1	21	(0)	2477190
42	0.0	0.0	0.0	chr22	41978894	41978931	(8839537)	+	(GGA)n	Simple_repeat	1	38	(0)	2477191
221	16.9	4.3	0.0	chr22	41979084	41979138	(8839330)	+	L2b	LINE/L2	3333	3425	(1)	2477189
13	17.3	7.3	0.0	chr22	42283920	42283960	(8534508)	+	GA-rich	Low_complexity	1	44	(0)	2477719
18	13.1	5.4	5.1	chr22	42284090	42284145	(8534323)	+	G-rich	Low_complexity	1	59	(0)	2477720
439	32.1	2.1	0.0	chr22	42294645	42294784	(8523684)	C	MIRb	SINE/MIR	(37)	231	89	2477744
25	23.2	3.8	1.2	chr22	42299903	42299982	(8518486)	+	G-rich	Low_complexity	1	83	(0)	2477752
358	30.8	12.9	0.6	chr22	42303420	42303602	(8514866)	C	MIR	SINE/MIR	(20)	242	34	2477762
39	23.8	4.6	5.4	chr22	42303765	42303959	(8514509)	+	G-rich	Low_complexity	1	204	(0)	2477763
262	20.7	0.0	1.9	chr22	42344764	42344839	(8473629)	+	L2b	LINE/L2	3317	3416	(10)	2477842
2451	8.4	0.0	0.7	chr22	42451274	42451581	(8366887)	+	AluSq2	SINE/Alu	6	311	(2)	2478081
38	4.5	0.0	2.1	chr22	42451639	42451686	(8366782)	+	(CCT)n	Simple_repeat	1	48	(0)	2478082
245	28.4	5.4	0.0	chr22	42451807	42451894	(8366574)	C	L2c	LINE/L2	(39)	3348	3256	2478083
14	4.3	0.0	7.1	chr22	43203769	43203796	(7614672)	+	(GGGA)n	Simple_repeat	1	28	(0)	2479820
431	28.5	9.1	5.7	chr22	43389283	43389494	(7428974)	C	MIRc	SINE/MIR	(11)	257	38	2480144
18	6.2	2.6	5.1	chr22	43389678	43389723	(7428745)	+	(CTCCCTC)n	Simple_repeat	1	44	(0)	2480145
187	26.1	16.2	1.1	chr22	43846382	43846470	(6971998)	+	L2a	LINE/L2	3317	3421	(5)	2480860
222	30.9	5.0	6.2	chr22	43884961	43885100	(6933368)	+	MIRb	SINE/MIR	40	198	(70)	2480937
287	22.1	12.1	7.7	chr22	43885474	43885654	(6932814)	+	L2b	LINE/L2	2948	3137	(238)	2480938
327	24.6	13.4	4.3	chr22	43892240	43892354	(6926114)	C	MIRc	SINE/MIR	(95)	173	47	2480957
392	30.9	5.7	0.7	chr22	44685008	44685157	(6133311)	+	MIRb	SINE/MIR	21	178	(90)	2482426
216	33.0	9.9	0.0	chr22	44692038	44692128	(6126340)	+	MIRc	SINE/MIR	145	245	(23)	2482445
190	29.1	18.6	2.7	chr22	44692702	44692885	(6125583)	+	MIRb	SINE/MIR	15	234	(34)	2482446
379	16.5	7.2	2.1	chr22	44837869	44837961	(5980507)	+	MIR3	SINE/MIR	90	187	(21)	2482752
2055	14.2	0.0	1.9	chr22	44837965	44838140	(5980328)	C	AluSz	SINE/Alu	(3)	309	137	2482753
1384	28.1	6.3	3.4	chr22	44947837	44948066	(5870402)	C	L1ME3	LINE/L1	(0)	6162	5931	2482936
19076	10.4	1.4	5.5	chr22	44948067	44948399	(5870069)	C	Charlie3	DNA/hAT-Charlie	(0)	2706	2379	2482937
250	30.2	11.4	4.3	chr22	45072387	45072597	(5745871)	+	L2c	LINE/L2	2455	2682	(737)	2483177
232	32.1	20.0	2.5	chr22	45082772	45082889	(5735579)	C	L2a	LINE/L2	(836)	2583	2463	2483201
263	33.6	5.5	10.9	chr22	45082999	45083265	(5735203)	+	L2c	LINE/L2	3114	3365	(22)	2483203
17	21.1	4.1	0.0	chr22	45671885	45671933	(5146535)	+	(CGG)n	Simple_repeat	1	51	(0)	2484357
33	19.3	0.0	3.7	chr22	45671955	45672036	(5146432)	+	(CCT)n	Simple_repeat	1	82	(0)	2484358
205	33.0	8.7	0.0	chr22	46049840	46049954	(4768514)	C	MIRb	SINE/MIR	(47)	221	96	2484951
15	21.3	2.2	2.2	chr22	46050154	46050198	(4768270)	+	GA-rich	Low_complexity	1	46	(0)	2484952
19	7.4	0.0	0.0	chr22	47807666	47807694	(3010774)	+	(GGA)n	Simple_repeat	1	29	(0)	2487392
26	0.0	0.0	0.0	chr22	47807715	47807739	(3010729)	+	(GGA)n	Simple_repeat	1	25	(0)	2487392
1000	29.2	4.8	0.2	chr22	47918065	47918432	(2900036)	+	MLT1F	LTR/ERVL-MaLR	145	554	(6)	2487563
216	32.5	4.6	0.0	chr22	48555111	48555193	(2263275)	+	L2a	LINE/L2	3288	3374	(1)	2488380
17	10.8	0.0	0.0	chr22	48555196	48555225	(2263243)	+	(ATGA)n	Simple_repeat	1	30	(0)	2488382
8051	8.9	9.0	14.1	chr22	49669088	49670752	(1147716)	C	LTR12C	LTR/ERV1	(0)	1579	8	2489614
13	12.3	0.0	9.3	chr22	49918445	49918487	(899981)	+	G-rich	Low_complexity	1	43	(0)	2489962
34	36.0	0.0	4.0	chr22	49970634	49970807	(847661)	+	(GT)n	Simple_repeat	1	174	(0)	2490008
17	17.7	0.0	0.0	chr22	50526098	50526135	(292333)	+	(CAGCGC)n	Simple_repeat	1	38	(0)	2490809
14	24.1	8.1	2.1	chr22	50526145	50526230	(292238)	+	G-rich	Low_complexity	1	93	(0)	2490810
848	28.3	13.0	1.1	chr3	4311128	4311506	(193984053)	+	L4_A_Mam	LINE/RTE-X	4140	4570	(420)	2498787
29	17.9	3.8	2.4	chr3	4493401	4493479	(193802080)	+	GA-rich	Low_complexity	1	82	(0)	2499109
403	27.3	9.6	0.0	chr3	9914951	9915100	(188380459)	+	MER91A	DNA/hAT-Tip100	20	185	(11)	2508245
17	11.7	8.3	1.9	chr3	9915510	9915579	(188379980)	+	(CTGCTCG)n	Simple_repeat	1	74	(0)	2508246
27	0.0	2.6	5.1	chr3	9952144	9952181	(188343378)	+	(CTC)n	Simple_repeat	1	39	(0)	2508332
12	5.6	0.0	0.0	chr3	10249437	10249455	(188046104)	+	(CTC)n	Simple_repeat	1	19	(0)	2509046
15	13.3	2.8	2.7	chr3	11496404	11496439	(186799120)	+	(TCCC)n	Simple_repeat	1	37	(0)	2511557
394	29.2	9.3	0.7	chr3	13345260	13345423	(184950136)	C	MIR3	SINE/MIR	(92)	170	4	2515075
1260	27.1	4.9	0.2	chr3	13831526	13831936	(184463623)	+	LTR16	LTR/ERVL	1	431	(7)	2515988
190	27.1	0.4	0.4	chr3	13832056	13832561	(184462998)	+	(CCT)n	Simple_repeat	1	508	(0)	2515989
613	26.6	2.9	2.9	chr3	14535220	14535393	(183760166)	+	MIRb	SINE/MIR	14	187	(81)	2517146
347	28.1	15.9	4.6	chr3	16933440	16933722	(181361837)	C	L1ME4b	LINE/L1	(41)	851	531	2521219
186	25.6	4.7	8.9	chr3	17196187	17196276	(181099283)	C	MER5A	DNA/hAT-Charlie	(56)	133	48	2521550
15	31.8	0.0	2.7	chr3	23203579	23203651	(175091908)	+	(CGTGCCC)n	Simple_repeat	1	73	(0)	2529844
2468	8.8	1.0	0.0	chr3	23388725	23389030	(174906529)	+	AluSg	SINE/Alu	1	309	(1)	2530079
16	15.2	6.5	2.0	chr3	24495301	24495346	(173800213)	+	(CCG)n	Simple_repeat	1	49	(0)	2531967
12	8.1	3.6	3.5	chr3	24495702	24495729	(173799830)	+	(GCCCG)n	Simple_repeat	1	29	(0)	2531968
20	14.1	0.0	2.4	chr3	27798263	27798303	(170497256)	+	(GGT)n	Simple_repeat	1	41	(0)	2536798
20	9.7	0.0	2.8	chr3	31532887	31532922	(166762637)	+	(CCT)n	Simple_repeat	1	36	(0)	2542253
12	26.8	0.0	0.0	chr3	32502546	32502585	(165792974)	+	(CCCGAG)n	Simple_repeat	1	40	(0)	2543989
12	11.7	10.8	0.0	chr3	32816441	32816477	(165479082)	+	G-rich	Low_complexity	1	41	(0)	2544749
15	9.2	8.6	0.0	chr3	32816531	32816565	(165478994)	+	(CCCCT)n	Simple_repeat	1	38	(0)	2544750
17	14.2	0.0	0.0	chr3	32816652	32816682	(165478877)	+	(GAG)n	Simple_repeat	1	31	(0)	2544751
15	8.0	3.7	0.0	chr3	37890838	37890864	(160404695)	+	(AGGA)n	Simple_repeat	1	28	(0)	2552224
280	26.8	7.6	0.0	chr3	38039699	38039795	(160255764)	C	L2a	LINE/L2	(27)	3399	3295	2552430
722	20.0	10.1	2.3	chr3	40308962	40309135	(157986424)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2555736
13	25.5	0.0	0.0	chr3	43690981	43691017	(154604542)	+	(GCG)n	Simple_repeat	1	37	(0)	2560995
20	32.8	2.8	0.0	chr3	43894415	43894486	(154401073)	+	(GC)n	Simple_repeat	1	74	(0)	2561332
16	19.2	2.0	3.9	chr3	45146457	45146507	(153149052)	+	(CCTCCT)n	Simple_repeat	1	52	(0)	2563314
100	13.9	3.6	1.0	chr3	46629633	46629828	(151665731)	+	GA-rich	Low_complexity	1	203	(0)	2565708
378	27.4	11.7	3.7	chr3	46629879	46630151	(151665408)	C	LTR33A	LTR/ERVL	(77)	443	146	2565709
14	23.0	1.8	5.3	chr3	46979798	46979853	(151315706)	+	(CGG)n	Simple_repeat	1	57	(0)	2566214
14	7.8	0.0	6.5	chr3	46979838	46979868	(151315691)	+	(GCCGG)n	Simple_repeat	1	31	(0)	2566215
31	16.1	2.4	9.4	chr3	46979917	46980041	(151315518)	+	(GCCCGC)n	Simple_repeat	1	128	(0)	2566216
12	24.1	0.0	0.0	chr3	46982086	46982119	(151313440)	+	(GCCT)n	Simple_repeat	1	34	(0)	2566219
11	27.4	2.0	2.0	chr3	48088856	48088905	(150206654)	+	(GGAGCCG)n	Simple_repeat	1	51	(0)	2568628
11	27.9	1.6	4.8	chr3	48446890	48446951	(149848608)	+	G-rich	Low_complexity	1	63	(0)	2569324
15	17.6	0.0	4.8	chr3	48504095	48504136	(149791423)	+	(GGCG)n	Simple_repeat	1	42	(0)	2569461
18	18.9	0.0	2.3	chr3	48504161	48504172	(149791387)	+	(CCGCC)n	Simple_repeat	1	43	(0)	2569462
13	10.4	6.5	0.0	chr3	48504173	48504203	(149791356)	+	(CCCTCG)n	Simple_repeat	1	33	(0)	2569463
37	8.9	0.0	9.3	chr3	48504228	48504313	(149791246)	+	GA-rich	Low_complexity	1	86	(0)	2569464
20	9.2	2.9	0.0	chr3	49461846	49461880	(148833679)	+	(CCT)n	Simple_repeat	1	36	(0)	2571432
16	26.7	0.0	3.5	chr3	49470325	49470381	(148825178)	+	(GGC)n	Simple_repeat	1	57	(0)	2571453
189	33.8	4.8	0.0	chr3	50211018	50211097	(148084462)	C	MIR3	SINE/MIR	(83)	125	42	2572772
12	12.0	0.0	6.5	chr3	50236139	50236169	(148059390)	+	(CGCCC)n	Simple_repeat	1	31	(0)	2572805
24	14.4	0.0	6.6	chr3	50236264	50236324	(148059235)	+	G-rich	Low_complexity	1	61	(0)	2572806
12	23.5	5.1	3.2	chr3	50321388	50321464	(147974095)	+	(CCAGC)n	Simple_repeat	1	78	(0)	2572910
12	16.9	0.0	0.0	chr3	50341022	50341048	(147954511)	+	(CCTT)n	Simple_repeat	1	27	(0)	2572929
13	12.1	5.0	4.8	chr3	50539386	50539425	(147756134)	+	GA-rich	Low_complexity	1	42	(0)	2573172
36	4.9	0.0	0.0	chr3	51385311	51385352	(146910207)	+	(GGA)n	Simple_repeat	1	42	(0)	2574229
19	10.4	0.0	0.0	chr3	51385525	51385556	(146910003)	+	(GAGGGC)n	Simple_repeat	1	32	(0)	2574230
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
14	17.3	5.1	0.0	chr3	51538872	51538910	(146756649)	+	(CGGCG)n	Simple_repeat	1	41	(0)	2574564
478	31.3	8.5	7.6	chr3	51773484	51773877	(146521682)	+	MLT1I	LTR/ERVL-MaLR	1	398	(13)	2574947
825	28.3	5.4	7.5	chr3	51773917	51774314	(146521245)	+	MLT1J	LTR/ERVL-MaLR	122	510	(2)	2574948
14	20.9	5.1	3.2	chr3	51955866	51955924	(146339635)	+	(GCCGC)n	Simple_repeat	1	62	(0)	2575221
246	30.2	16.1	0.7	chr3	53171624	53171837	(145123722)	C	L2c	LINE/L2	(187)	3188	2941	2577132
15	17.1	2.4	2.4	chr3	53494202	53494242	(144801317)	+	(GGAGCC)n	Simple_repeat	1	42	(0)	2577717
15	16.5	8.9	1.6	chr3	58332712	58332767	(139962792)	+	(GCGCAG)n	Simple_repeat	1	61	(0)	2585826
16	26.4	1.4	4.2	chr3	58333103	58333172	(139962387)	+	G-rich	Low_complexity	1	71	(0)	2585827
14	14.6	0.0	3.1	chr3	63912111	63912142	(134383417)	+	(CGGA)n	Simple_repeat	1	32	(0)	2594888
18	15.0	0.0	2.6	chr3	64686796	64686834	(133608725)	+	GA-rich	Low_complexity	1	39	(0)	2596141
17	11.0	4.9	2.3	chr3	64687670	64687711	(133607848)	+	(CCCT)n	Simple_repeat	1	43	(0)	2596143
13	26.5	0.0	6.6	chr3	64687713	64687773	(133607786)	+	(GGC)n	Simple_repeat	1	61	(0)	2596144
22	9.5	0.0	0.0	chr3	64687877	64687910	(133607649)	+	(AGG)n	Simple_repeat	1	34	(0)	2596145
15	19.7	0.0	0.0	chr3	64688033	64688061	(133607498)	+	G-rich	Low_complexity	1	29	(0)	2596146
23	26.1	3.6	4.3	chr3	65549262	65549372	(132746187)	+	(CTCC)n	Simple_repeat	1	115	(0)	2597590
295	30.4	1.2	1.2	chr3	66537633	66537712	(131757847)	+	MLT1J-int	LTR/ERVL-MaLR	1250	1329	(58)	2599365
656	28.6	13.1	2.5	chr3	66538035	66538396	(131757163)	+	L2a	LINE/L2	3021	3426	(0)	2599366
29	28.1	0.0	1.1	chr3	67654603	67654718	(130640841)	+	GA-rich	Low_complexity	1	114	(0)	2601160
12	19.6	0.0	0.0	chr3	67654708	67654736	(130640823)	+	(GGCCG)n	Simple_repeat	1	29	(0)	2601161
17	14.1	2.4	2.4	chr3	68007578	68007633	(130287926)	+	(CCCT)n	Simple_repeat	1	56	(0)	2601766
41	4.5	0.0	0.0	chr3	71753648	71753693	(126541866)	+	(GCG)n	Simple_repeat	1	46	(0)	2607756
20	11.1	2.4	2.4	chr3	71754280	71754320	(126541239)	+	(GGC)n	Simple_repeat	1	42	(0)	2607757
11	21.7	6.0	1.9	chr3	71754493	71754542	(126541017)	+	(GGCGCT)n	Simple_repeat	1	53	(0)	2607758
345	31.0	4.4	3.3	chr3	72039484	72039663	(126255896)	C	MER5A	DNA/hAT-Charlie	(6)	183	2	2608330
223	36.0	9.4	2.9	chr3	72039900	72040097	(126255462)	+	L2a	LINE/L2	2951	3165	(210)	2608331
51	18.6	5.0	5.8	chr3	72279881	72280078	(126015481)	+	GA-rich	Low_complexity	1	208	(0)	2608848
296	29.8	7.1	0.8	chr3	74615049	74615180	(123680379)	C	MIRb	SINE/MIR	(0)	268	128	2613010
15	14.5	5.0	2.4	chr3	88059213	88059252	(110236307)	+	GA-rich	Low_complexity	1	42	(0)	2630312
13	0.0	0.0	0.0	chr3	88059269	88059285	(110236274)	+	(CGG)n	Simple_repeat	1	17	(0)	2630313
20	23.6	0.0	0.0	chr3	88059419	88059468	(110236091)	+	(GGC)n	Simple_repeat	1	50	(0)	2630314
14	28.2	0.0	1.9	chr3	98901217	98901273	(99394286)	+	G-rich	Low_complexity	1	55	(0)	2639605
13	16.9	3.0	0.0	chr3	98901541	98901573	(99393986)	+	GA-rich	Low_complexity	1	34	(0)	2639606
17	18.6	0.0	7.0	chr3	98902062	98902118	(99393441)	+	(CCTCGCT)n	Simple_repeat	1	57	(0)	2639607
14111	23.4	4.4	1.1	chr3	99170775	99174248	(99121311)	+	L1PREC2	LINE/L1	18	3863	(4292)	2639931
34	17.1	0.0	0.0	chr3	107525317	107525378	(90770181)	+	GA-rich	Low_complexity	1	62	(0)	2651005
15	24.9	1.9	1.8	chr3	112086265	112086318	(86209241)	+	(CCGCT)n	Simple_repeat	1	55	(0)	2657367
27	13.1	2.0	0.0	chr3	113211448	113211497	(85084062)	+	(CTC)n	Simple_repeat	1	51	(0)	2658907
293	29.7	4.1	4.1	chr3	119241130	119241252	(79054307)	C	MIRb	SINE/MIR	(47)	221	99	2667269
19	23.1	4.0	2.6	chr3	120285175	120285248	(78010311)	+	(GCGCCGG)n	Simple_repeat	1	77	(0)	2668922
13	18.2	0.0	0.0	chr3	122795234	122795264	(75500295)	+	G-rich	Low_complexity	1	31	(0)	2672621
15	17.6	0.0	0.0	chr3	122795282	122795313	(75500246)	+	(GGC)n	Simple_repeat	1	32	(0)	2672622
14	10.3	2.9	5.6	chr3	122795341	122795375	(75500184)	+	(GCT)n	Simple_repeat	1	36	(0)	2672623
269	28.7	10.1	5.9	chr3	122952673	122952824	(75342735)	+	LTR33	LTR/ERVL	1	159	(356)	2672863
721	19.3	5.0	6.3	chr3	122952882	122953086	(75342473)	+	LTR33	LTR/ERVL	312	513	(2)	2672863
315	29.5	13.7	3.7	chr3	122957620	122957809	(75337750)	C	MIRb	SINE/MIR	(30)	238	27	2672871
229	27.0	0.0	1.6	chr3	122957890	122957953	(75337606)	+	MamRep605	LTR?	460	522	(327)	2672872
377	29.7	12.6	9.6	chr3	123780763	123781142	(74514417)	C	L2b	LINE/L2	(6)	3369	3002	2674287
680	16.3	21.2	0.6	chr3	124597614	124597792	(73697767)	+	MER33	DNA/hAT-Charlie	1	226	(98)	2675562
14	10.7	0.0	5.9	chr3	125212721	125212754	(73082805)	+	(CCCCG)n	Simple_repeat	1	34	(0)	2676637
35	10.0	0.0	0.0	chr3	125375248	125375302	(72920257)	+	(CTC)n	Simple_repeat	1	55	(0)	2676882
289	30.6	13.1	0.0	chr3	126259757	126259942	(72035617)	C	MamRep137	DNA/TcMar-Tigger	(69)	441	228	2678310
240	26.3	3.9	3.3	chr3	126260035	126260987	(72034572)	+	(CCT)n	Simple_repeat	1	990	(0)	2678311
12	27.2	5.3	0.0	chr3	126524196	126524252	(71771307)	+	(GCTGC)n	Simple_repeat	1	60	(0)	2678727
14	26.6	0.0	7.7	chr3	126524382	126524459	(71771100)	+	(GCGCCC)n	Simple_repeat	1	78	(0)	2678728
235	26.2	16.0	0.3	chr3	126751709	126751877	(71543682)	+	MIR	SINE/MIR	28	239	(29)	2679040
420	27.6	8.2	0.0	chr3	127158725	127158927	(71136632)	C	L2b	LINE/L2	(196)	3179	2959	2679605
266	29.0	5.2	3.3	chr3	127159045	127159194	(71136365)	+	MIR	SINE/MIR	23	175	(87)	2679606
2125	12.3	0.0	0.0	chr3	127683413	127683697	(70611862)	C	AluSx1	SINE/Alu	(27)	285	1	2680502
15	17.6	1.7	8.2	chr3	128153460	128153519	(70142040)	+	G-rich	Low_complexity	1	61	(0)	2681288
14	4.0	3.3	6.5	chr3	128153493	128153522	(70142037)	+	(GGC)n	Simple_repeat	1	31	(0)	2681289
18	19.4	0.0	0.0	chr3	128153711	128153751	(70141808)	+	(GCCCGA)n	Simple_repeat	1	41	(0)	2681290
184	33.0	3.2	3.2	chr3	128433477	128433570	(69861989)	+	MIR3	SINE/MIR	52	145	(63)	2681720
244	22.9	0.0	0.0	chr3	128438515	128438572	(69856987)	C	MIR1_Amn	SINE/MIR	(92)	176	118	2681731
245	27.7	2.6	7.4	chr3	129026923	129027043	(69268516)	C	MLT1L	LTR/ERVL-MaLR	(81)	529	415	2682901
94	26.2	5.3	4.3	chr3	132722403	132722890	(65572669)	+	G-rich	Low_complexity	1	514	(0)	2688839
18	29.3	1.7	0.0	chr3	133038328	133038385	(65257174)	+	(GC)n	Simple_repeat	1	59	(0)	2689335
13	15.9	0.0	0.0	chr3	133038492	133038519	(65257040)	+	G-rich	Low_complexity	1	28	(0)	2689336
23	6.0	2.9	0.0	chr3	134030030	134030064	(64265495)	+	(GCC)n	Simple_repeat	1	36	(0)	2690822
11	29.1	3.7	0.0	chr3	134364168	134364221	(63931338)	+	G-rich	Low_complexity	1	56	(0)	2691340
17	21.5	0.0	3.9	chr3	134374582	134374633	(63920926)	+	(CCTCCGC)n	Simple_repeat	1	52	(0)	2691350
38	2.8	0.0	0.0	chr3	134374902	134374938	(63920621)	+	(TG)n	Simple_repeat	1	37	(0)	2691351
226	25.9	4.3	1.1	chr3	137035686	137035775	(61259784)	C	LTR16A2	LTR/ERVL	(389)	106	14	2695524
12	17.1	2.9	2.8	chr3	138608976	138609010	(59686549)	+	(CGCC)n	Simple_repeat	1	36	(0)	2697787
13	22.5	2.3	2.3	chr3	138609063	138609105	(59686454)	+	(GCG)n	Simple_repeat	1	44	(0)	2697788
19	10.8	2.3	4.4	chr3	138609240	138609284	(59686275)	+	G-rich	Low_complexity	1	44	(0)	2697789
271	27.1	9.2	0.8	chr3	138609349	138609478	(59686081)	C	L1ME4a	LINE/L1	(16)	6108	5967	2697790
224	24.4	3.7	10.3	chr3	139329689	139329775	(58965784)	+	MIRc	SINE/MIR	149	229	(39)	2699156
513	33.8	7.5	0.0	chr3	139329788	139329997	(58965562)	C	MIRb	SINE/MIR	(11)	257	31	2699157
24	15.8	0.0	3.8	chr3	141051386	141051438	(57244121)	+	(GGC)n	Simple_repeat	1	53	(0)	2701695
35	13.0	0.0	1.6	chr3	147409981	147410042	(50885517)	+	(CTC)n	Simple_repeat	1	62	(0)	2710739
36	16.3	3.1	4.0	chr3	149970880	149970975	(48324584)	+	(GCG)n	Simple_repeat	1	99	(0)	2714495
13	9.6	0.0	0.0	chr3	149971187	149971209	(48324350)	+	(GCGT)n	Simple_repeat	1	23	(0)	2714496
75	8.3	0.0	0.0	chr3	150703722	150703823	(47591736)	+	(CTC)n	Simple_repeat	1	102	(0)	2715698
12	19.4	4.7	2.2	chr3	152268641	152268683	(46026876)	+	(CGGCTC)n	Simple_repeat	1	45	(0)	2717973
2435	8.9	1.0	0.0	chr3	156752367	156752657	(41542902)	C	AluSx1	SINE/Alu	(18)	294	1	2724492
55	17.5	4.0	0.8	chr3	156752691	156752816	(41542743)	+	GA-rich	Low_complexity	1	131	(0)	2724493
12	23.4	4.6	4.4	chr3	156816720	156816784	(41478775)	+	G-rich	Low_complexity	1	68	(0)	2724605
18	16.6	1.6	7.8	chr3	156817017	156817079	(41478480)	+	(GCG)n	Simple_repeat	1	64	(0)	2724606
13	5.3	0.0	0.0	chr3	156826640	156826659	(41468900)	+	(CCT)n	Simple_repeat	1	20	(0)	2724616
34	27.5	1.6	2.4	chr3	158105768	158105890	(40189669)	+	(CCG)n	Simple_repeat	1	125	(0)	2726362
22	11.7	0.0	0.0	chr3	159764661	159764697	(38530862)	+	(GGA)n	Simple_repeat	1	37	(0)	2728702
17	23.0	0.0	0.0	chr3	160755990	160756030	(37539529)	+	(GCT)n	Simple_repeat	1	41	(0)	2730312
1165	30.9	10.6	3.0	chr3	160929659	160930255	(37365304)	C	LTR78	LTR/ERV1	(606)	690	11	2730575
35	23.2	3.9	5.0	chr3	179451502	179451656	(18843903)	+	(CGCGGCG)n	Simple_repeat	1	161	(0)	2756239
360	31.4	8.4	2.8	chr3	179563848	179564027	(18731532)	+	MIRb	SINE/MIR	13	203	(65)	2756444
14	19.9	2.4	2.3	chr3	181712415	181712456	(16583103)	+	(GGC)n	Simple_repeat	1	43	(0)	2759751
518	32.9	3.6	2.5	chr3	184389071	184389313	(13906246)	C	MIRb	SINE/MIR	(22)	246	1	2764515
1800	23.1	4.8	2.3	chr3	184541323	184541805	(13753754)	C	ERV3-16A3_I-int	LTR/ERVL	(1197)	4029	3534	2764862
12	14.9	6.0	5.7	chr3	184569120	184569169	(13726390)	+	G-rich	Low_complexity	1	53	(0)	2764921
20	21.6	0.0	3.5	chr3	184569184	184569240	(13726319)	+	(GGCG)n	Simple_repeat	1	57	(0)	2764922
275	20.3	5.9	0.0	chr3	184767681	184767744	(13527815)	C	LTR16	LTR/ERVL	(262)	176	109	2765282
12	8.8	4.2	0.0	chr3	185152947	185152970	(13142589)	+	(GCG)n	Simple_repeat	1	25	(0)	2765862
19	20.0	0.0	3.6	chr3	185823771	185823825	(12471734)	+	G-rich	Low_complexity	1	55	(0)	2767147
88	2.8	3.5	1.7	chr3	186597604	186597717	(11697842)	+	(TTTC)n	Simple_repeat	1	118	(0)	2768625
50	18.6	1.8	1.8	chr3	186597718	186597829	(11697730)	+	(CTTC)n	Simple_repeat	1	114	(0)	2768626
21	17.3	0.0	0.0	chr3	190120671	190120711	(8174848)	+	(GCA)n	Simple_repeat	1	41	(0)	2774610
19	0.0	0.0	0.0	chr3	193241119	193241142	(5054417)	+	(GGCG)n	Simple_repeat	1	24	(0)	2779170
184	36.5	0.0	0.0	chr3	194070556	194070629	(4224930)	+	MIR3	SINE/MIR	50	123	(85)	2780481
13	17.8	4.9	2.3	chr3	194163904	194163944	(4131615)	+	(CCT)n	Simple_repeat	1	43	(0)	2780658
26	31.7	2.4	3.1	chr3	194182251	194182375	(4113184)	+	(CTT)n	Simple_repeat	1	128	(0)	2780691
24	28.2	6.1	0.8	chr3	194182424	194182538	(4113021)	+	GA-rich	Low_complexity	1	122	(0)	2780692
211	6.6	1.5	0.0	chr3	194706163	194706431	(3589128)	+	(GT)n	Simple_repeat	1	273	(0)	2781691
240	32.9	12.2	4.4	chr3	194706433	194706725	(3588834)	C	L2	LINE/L2	(470)	2949	2631	2781692
702	23.7	9.3	0.0	chr3	194706764	194706949	(3588610)	+	MER63A	DNA/hAT-Blackjack	1	205	(5)	2781693
2299	7.5	1.7	0.0	chr3	195747584	195747878	(2547681)	+	AluSz	SINE/Alu	1	300	(12)	2783589
26	3.2	0.0	2.9	chr3	195747963	195747996	(2547563)	+	(CCCCG)n	Simple_repeat	1	34	(0)	2783590
14	7.7	3.3	3.2	chr3	195748011	195748040	(2547519)	+	(GCCCC)n	Simple_repeat	1	31	(0)	2783591
826	31.3	12.2	5.6	chr3	197526012	197526990	(768569)	C	LTR78	LTR/ERV1	(43)	1261	210	2787065
16	0.0	0.0	0.0	chr3	197555249	197555268	(740291)	+	(GGA)n	Simple_repeat	1	20	(0)	2787121
284	31.6	2.9	1.4	chr3	197555315	197555452	(740107)	+	MIR3	SINE/MIR	23	162	(46)	2787122
12	11.6	3.3	3.2	chr4	107662	107691	(190106864)	+	(TCC)n	Simple_repeat	1	31	(0)	2788642
180	29.3	3.5	3.5	chr4	1105434	1105518	(189109037)	C	L2a	LINE/L2	(140)	3286	3202	2789867
19	23.8	3.0	1.5	chr4	1249210	1249275	(188965280)	+	G-rich	Low_complexity	1	68	(0)	2790022
39	0.0	0.0	0.0	chr4	1401315	1401350	(188813205)	+	(GGAGGGA)n	Simple_repeat	1	36	(0)	2790175
14	29.9	4.3	0.0	chr4	1572098	1572166	(188642389)	+	(CCCAGC)n	Simple_repeat	1	72	(0)	2790311
277	21.0	8.3	0.0	chr4	1574065	1574164	(188640391)	C	L1MC4a	LINE/L1	(1)	7881	7773	2790312
22	15.9	0.0	5.4	chr4	1599917	1599972	(188614583)	+	(CCCCTC)n	Simple_repeat	1	56	(0)	2790344
28	21.4	4.1	3.0	chr4	1712179	1712192	(188502363)	+	(GGCAG)n	Simple_repeat	1	38	(63)	2790520
13	0.0	6.9	6.5	chr4	1764870	1764898	(188449657)	+	(TCC)n	Simple_repeat	1	31	(0)	2790578
28	3.3	0.0	0.0	chr4	1765849	1765879	(188448676)	+	(GGGAGGA)n	Simple_repeat	1	31	(0)	2790580
285	30.2	6.1	0.0	chr4	1792841	1792979	(188421576)	+	L2c	LINE/L2	3058	3205	(182)	2790606
714	15.5	4.6	3.1	chr4	2009803	2009931	(188204624)	C	AluJo	SINE/Alu	(180)	132	2	2790937
269	33.3	1.1	0.0	chr4	2071162	2071251	(188143304)	+	MIR	SINE/MIR	105	195	(67)	2791053
180	29.7	8.8	12.9	chr4	2787531	2787708	(187426847)	+	OldhAT1	DNA/hAT-Ac	637	806	(2042)	2792243
13	4.7	0.0	4.2	chr4	2787723	2787746	(187426809)	+	(GGCA)n	Simple_repeat	1	24	(0)	2792244
31	11.8	2.9	4.2	chr4	3365352	3365421	(186849134)	+	GA-rich	Low_complexity	1	72	(0)	2793107
637	23.8	2.7	1.6	chr4	3801779	3801962	(186412593)	+	MER53	DNA/hAT	8	193	(0)	2793630
255	37.8	0.0	0.0	chr4	3802223	3802304	(186412251)	C	MIR1_Amn	SINE/MIR	(66)	164	83	2793631
329	36.7	0.6	1.7	chr4	4872448	4872627	(185341928)	C	MIRb	SINE/MIR	(21)	247	70	2795626
438	29.8	4.3	3.8	chr4	5018675	5018859	(185195696)	C	MIR	SINE/MIR	(12)	250	65	2795867
34	5.1	0.0	0.0	chr4	5018987	5019027	(185195528)	+	(T)n	Simple_repeat	1	41	(0)	2795868
19	18.0	4.0	0.0	chr4	5051776	5051825	(185162730)	+	(CCCGCAT)n	Simple_repeat	1	52	(0)	2795941
208	27.7	1.5	1.5	chr4	5708817	5708882	(184505673)	+	L2b	LINE/L2	3095	3160	(227)	2797031
218	25.2	16.6	0.9	chr4	5710919	5711031	(184503524)	+	MIRb	SINE/MIR	119	248	(14)	2797035
15	21.5	6.1	0.0	chr4	5888483	5888531	(184326024)	+	GA-rich	Low_complexity	1	52	(0)	2797363
360	29.2	3.0	5.3	chr4	5955880	5956049	(184258506)	+	L1ME4b	LINE/L1	243	408	(484)	2797486
212	26.5	0.0	0.0	chr4	6105348	6105396	(184109159)	+	L2a	LINE/L2	3352	3400	(26)	2797748
335	29.2	14.3	0.0	chr4	6245180	6245347	(183969208)	C	LTR16C	LTR/ERVL	(91)	398	203	2798028
984	25.6	9.7	4.8	chr4	6345328	6345787	(183868768)	+	MLT1D	LTR/ERVL-MaLR	1	485	(20)	2798194
230	26.7	3.9	1.3	chr4	6391268	6391343	(183823212)	+	MIR3	SINE/MIR	85	162	(46)	2798285
3297	11.4	5.2	1.1	chr4	6658073	6658643	(183555912)	C	MER51C	LTR/ERV1	(1)	639	3	2798826
12	20.8	3.1	7.6	chr4	6716367	6716430	(183498125)	+	(CGC)n	Simple_repeat	1	66	(0)	2798931
12	19.6	0.0	0.0	chr4	6783542	6783570	(183430985)	+	(CTCCC)n	Simple_repeat	1	29	(0)	2799090
24	23.1	4.0	6.2	chr4	6783607	6783731	(183430824)	+	G-rich	Low_complexity	1	130	(0)	2799091
16	23.0	0.0	5.4	chr4	7192303	7192358	(183022197)	+	GA-rich	Low_complexity	1	56	(0)	2799781
12	12.7	3.9	9.3	chr4	7192437	7192488	(183022067)	+	(GGTGGC)n	Simple_repeat	1	54	(0)	2799782
194	19.3	4.2	4.2	chr4	7294644	7295236	(182919319)	+	(CCTCTC)n	Simple_repeat	1	618	(0)	2799940
12	17.7	3.1	0.0	chr4	7296497	7296528	(182918027)	+	(ACCCC)n	Simple_repeat	1	33	(0)	2799943
294	37.8	1.6	0.8	chr4	7296594	7296745	(182917810)	+	MIR	SINE/MIR	75	229	(39)	2799944
1399	25.5	6.2	2.3	chr4	7442789	7443225	(182771330)	C	MLT1C	LTR/ERVL-MaLR	(6)	461	7	2800154
133	25.4	4.4	3.9	chr4	7522597	7523136	(182691419)	+	(CCTC)n	Simple_repeat	1	564	(0)	2800262
266	27.9	7.2	3.7	chr4	7523262	7523369	(182691186)	C	MIR3	SINE/MIR	(16)	192	81	2800263
207	29.6	6.7	5.3	chr4	7929500	7929631	(182284924)	+	L2c	LINE/L2	3086	3219	(168)	2800927
2846	13.6	5.0	3.2	chr4	8050028	8050286	(182164269)	+	MER4B	LTR/ERV1	353	766	(0)	2801149
201	30.0	8.1	0.0	chr4	8070670	8070749	(182143806)	+	L2b	LINE/L2	3274	3360	(15)	2801185
14	27.0	4.3	2.7	chr4	8871369	8871438	(181343117)	+	(CCG)n	Simple_repeat	1	73	(0)	2802393
23	27.1	4.5	3.6	chr4	8871407	8871538	(181343017)	+	(GTCGCC)n	Simple_repeat	1	138	(0)	2802394
188	22.4	0.0	4.9	chr4	8891879	8891939	(181322616)	+	L2c	LINE/L2	3099	3156	(231)	2802428
25	21.8	2.8	1.4	chr4	13542392	13542462	(176672093)	+	(CGC)n	Simple_repeat	1	73	(0)	2809467
28	23.4	2.2	3.2	chr4	13547530	13547620	(176666935)	+	(TCC)n	Simple_repeat	1	93	(0)	2809470
17	15.6	0.0	0.0	chr4	16898575	16898603	(173315952)	+	(AC)n	Simple_repeat	1	29	(0)	2815165
81	13.1	2.4	3.5	chr4	16898667	16898836	(173315719)	+	G-rich	Low_complexity	1	174	(0)	2815166
76	0.0	0.0	0.0	chr4	16898838	16898902	(173315653)	+	(GA)n	Simple_repeat	1	65	(0)	2815167
15	20.3	0.0	8.3	chr4	17781784	17781843	(172432712)	+	(GGACAG)n	Simple_repeat	1	60	(0)	2816919
58	1.9	0.0	0.0	chr4	24470272	24470325	(165744230)	+	(AC)n	Simple_repeat	1	54	(0)	2827178
31	3.1	0.0	0.0	chr4	24472664	24472696	(165741859)	+	(GCC)n	Simple_repeat	1	33	(0)	2827180
33	0.0	2.9	0.0	chr4	25160484	25160518	(165054037)	+	(AAAAC)n	Simple_repeat	1	36	(0)	2828388
14	15.9	0.0	0.0	chr4	25234217	25234244	(164980311)	+	GA-rich	Low_complexity	1	28	(0)	2828551
1208	29.2	10.6	8.6	chr4	26441958	26443068	(163771487)	+	L2a	LINE/L2	2263	3424	(2)	2831052
14	11.7	8.1	0.0	chr4	37826624	37826660	(152387895)	+	(CTCCGC)n	Simple_repeat	1	40	(0)	2846764
35	7.0	0.0	0.0	chr4	37891044	37891089	(152323466)	+	(CCT)n	Simple_repeat	1	46	(0)	2846890
12	34.6	0.0	3.0	chr4	37891094	37891108	(152323447)	+	(GCT)n	Simple_repeat	1	35	(31)	2846891
14	19.4	0.0	5.0	chr4	37891109	37891148	(152323407)	+	(GCC)n	Simple_repeat	1	40	(0)	2846892
12	34.6	0.0	3.0	chr4	37891149	37891159	(152323396)	+	(GCT)n	Simple_repeat	36	66	(0)	2846891
2341	9.8	0.0	0.0	chr4	40566366	40566660	(149647895)	+	AluSg	SINE/Alu	2	296	(14)	2852319
640	24.0	6.7	2.8	chr4	40566661	40566855	(149647700)	+	MIR	SINE/MIR	35	238	(24)	2852318
387	14.5	0.0	0.6	chr4	40566868	40566947	(149647608)	C	FLAM_C	SINE/Alu	(224)	78	1	2852320
270	30.9	0.0	2.3	chr4	40567069	40567154	(149647401)	C	MIRb	SINE/MIR	(134)	134	51	2852321
12	22.4	0.0	2.6	chr4	52751641	52751678	(137462877)	+	G-rich	Low_complexity	1	38	(0)	2866702
1557	10.3	0.8	2.8	chr4	55540587	55540835	(134673720)	C	7SK	RNA	(87)	244	1	2871079
11	17.1	2.9	2.8	chr4	55540931	55540965	(134673590)	+	A-rich	Low_complexity	1	36	(0)	2871080
18	7.0	0.0	5.9	chr4	55636097	55636130	(134578425)	+	(GCA)n	Simple_repeat	1	34	(0)	2871241
2546	4.6	0.3	1.0	chr4	56436713	56437014	(133777541)	+	AluSx	SINE/Alu	1	300	(12)	2872602
85	4.2	3.9	2.3	chr4	59088844	59088971	(131125584)	+	(TCC)n	Simple_repeat	1	133	(0)	2876552
18	24.4	0.0	0.0	chr4	61201264	61201311	(129013244)	+	(AGC)n	Simple_repeat	1	48	(0)	2879118
15	20.0	3.6	3.5	chr4	65669685	65669739	(124544816)	+	(CGCCCCGG)n	Simple_repeat	1	57	(0)	2884661
13	18.2	0.0	4.9	chr4	65670313	65670353	(124544202)	+	(GCTGAGG)n	Simple_repeat	1	41	(0)	2884662
33	23.1	1.9	3.6	chr4	70688885	70688992	(119525563)	+	GA-rich	Low_complexity	1	110	(0)	2890981
21	8.6	2.6	2.5	chr4	70689132	70689170	(119525385)	+	(AGG)n	Simple_repeat	1	40	(0)	2890982
22	17.0	0.0	6.6	chr4	72569253	72569313	(117645242)	+	GA-rich	Low_complexity	1	61	(0)	2893669
13	19.2	6.1	1.9	chr4	72569320	72569368	(117645187)	+	(GCTGCTG)n	Simple_repeat	1	52	(0)	2893670
16	14.5	5.3	0.0	chr4	73998498	73998535	(116216020)	+	(CAG)n	Simple_repeat	1	40	(0)	2895598
14	14.2	4.9	2.3	chr4	74365267	74365307	(115849248)	+	(CAGCGCC)n	Simple_repeat	1	43	(0)	2896073
1150	23.9	7.5	5.0	chr4	82619236	82619354	(107595201)	C	ERV3-16A3_LTR	LTR/ERVL	(288)	134	2	2907940
17	20.9	2.9	5.7	chr4	83334900	83334967	(106879588)	+	(CCTC)n	Simple_repeat	1	70	(0)	2909320
14	0.0	0.0	0.0	chr4	86594582	86594599	(103619956)	+	(GAG)n	Simple_repeat	1	18	(0)	2914076
45	13.3	0.0	0.0	chr4	88697280	88697353	(101517202)	+	(CCT)n	Simple_repeat	1	74	(0)	2917574
17	20.6	0.0	0.0	chr4	88823320	88823358	(101391197)	+	(CTC)n	Simple_repeat	1	39	(0)	2917721
32	8.3	2.0	0.0	chr4	88823366	88823416	(101391139)	+	(CCT)n	Simple_repeat	1	52	(0)	2917722
24	19.2	0.0	1.8	chr4	89837163	89837217	(100377338)	+	(TCC)n	Simple_repeat	1	55	(0)	2919194
5174	21.5	4.4	2.9	chr4	92254187	92255466	(97959089)	C	L1P3b	LINE/L1	(5141)	1320	8	2922046
3302	27.6	5.5	5.6	chr4	92255532	92257526	(97957029)	C	L1M2	LINE/L1	(4787)	2062	10	2922047
139	6.8	0.0	0.0	chr4	93407703	93407872	(96806683)	+	(CTC)n	Simple_repeat	1	170	(0)	2923606
26	22.0	4.8	5.4	chr4	98658600	98658723	(91555832)	+	(CGCT)n	Simple_repeat	1	130	(0)	2930460
13	23.2	0.0	2.4	chr4	98928035	98928076	(91286479)	+	A-rich	Low_complexity	1	42	(0)	2930945
13	27.6	5.6	1.3	chr4	98995966	98996036	(91218519)	+	(CTC)n	Simple_repeat	1	75	(0)	2931109
205	28.6	2.5	0.0	chr4	103198061	103198137	(87016418)	C	MIR3	SINE/MIR	(16)	192	114	2936744
16	4.5	0.0	0.0	chr4	104490928	104490950	(85723605)	+	(GAG)n	Simple_repeat	1	23	(0)	2938263
36	20.4	1.8	4.5	chr4	109730096	109730205	(80484350)	+	G-rich	Low_complexity	1	112	(0)	2945437
235	31.4	1.9	2.9	chr4	109730264	109730368	(80484187)	C	MER5B	DNA/hAT-Charlie	(39)	139	36	2945438
25	17.3	3.7	8.1	chr4	111011607	111011713	(79202842)	+	(TGCTC)n	Simple_repeat	1	111	(0)	2947371
360	23.7	8.4	0.7	chr4	111011825	111011977	(79202578)	C	Charlie7a	DNA/hAT-Charlie	(6)	266	101	2947372
471	28.2	13.9	0.0	chr4	113270684	113270825	(76943730)	C	MER5A1	DNA/hAT-Charlie	(0)	166	2	2950607
12	21.7	0.0	0.0	chr4	114598686	114598717	(75615838)	+	G-rich	Low_complexity	1	32	(0)	2952251
3082	15.8	3.6	5.2	chr4	116453039	116453667	(73760888)	C	LTR1A2	LTR/ERV1	(219)	618	1	2954471
14370	17.2	3.6	1.3	chr4	117771772	117774323	(72440232)	+	L1MA3	LINE/L1	9	2621	(4944)	2956050
1891	22.4	8.0	0.0	chr4	121765953	121766448	(68448107)	C	MLT1F	LTR/ERVL-MaLR	(9)	539	1	2961533
3069	21.8	6.0	1.0	chr4	138576287	138577378	(51637177)	+	L1M3f	LINE/L1	1267	2413	(4152)	2983066
1771	10.0	13.8	0.0	chr4	139188653	139188921	(51025634)	+	AluSz	SINE/Alu	1	312	(0)	2984119
305	20.8	12.0	8.9	chr4	139188922	139188995	(51025560)	C	MIR	SINE/MIR	(157)	105	17	2984118
30	0.0	0.0	0.0	chr4	139189007	139189034	(51025521)	+	(CCT)n	Simple_repeat	1	28	(0)	2984120
18	7.5	0.0	0.0	chr4	139556235	139556262	(50658293)	+	(GGA)n	Simple_repeat	1	28	(0)	2984844
13	16.4	0.0	5.3	chr4	139556334	139556371	(50658184)	+	(CCCTCGC)n	Simple_repeat	1	38	(0)	2984845
13	15.8	6.8	2.1	chr4	139734990	139735033	(50479522)	+	(GCCCGC)n	Simple_repeat	1	47	(0)	2985181
32	19.4	2.5	1.2	chr4	140151163	140151241	(50063314)	+	GA-rich	Low_complexity	1	81	(0)	2985797
15	17.0	0.0	6.7	chr4	140756162	140756206	(49458349)	+	(GCG)n	Simple_repeat	1	45	(0)	2986713
13	25.7	3.5	1.7	chr4	140756306	140756362	(49458193)	+	(GCCCCCG)n	Simple_repeat	1	59	(0)	2986714
30	12.4	1.9	0.0	chr4	140756367	140756419	(49458136)	+	(GGA)n	Simple_repeat	1	54	(0)	2986715
18	24.4	4.3	1.4	chr4	141132825	141132893	(49081662)	+	(CCCCG)n	Simple_repeat	1	72	(0)	2987300
21	16.2	2.0	2.0	chr4	143336127	143336176	(46878379)	+	(CTCC)n	Simple_repeat	1	51	(0)	2990175
12	32.3	0.0	1.8	chr4	143336252	143336307	(46878248)	+	G-rich	Low_complexity	1	56	(0)	2990176
12	13.5	2.8	5.4	chr4	143336362	143336397	(46878158)	+	G-rich	Low_complexity	1	37	(0)	2990176
15	14.4	0.0	0.0	chr4	145587443	145587466	(44627089)	+	(A)n	Simple_repeat	1	24	(0)	2993129
18	21.7	2.6	6.2	chr4	145733135	145733212	(44481343)	+	(GCCC)n	Simple_repeat	1	80	(0)	2993328
36	7.2	3.5	0.0	chr4	151409092	151409149	(38805406)	+	(CCCCGC)n	Simple_repeat	1	60	(0)	3001453
13	26.6	3.7	0.0	chr4	151409571	151409624	(38804931)	+	G-rich	Low_complexity	1	56	(0)	3001454
13	4.8	4.5	0.0	chr4	153759975	153759996	(36454559)	+	(GCG)n	Simple_repeat	1	23	(0)	3005152
20	8.5	0.0	7.0	chr4	173527236	173527278	(16687277)	+	(CCT)n	Simple_repeat	1	43	(0)	3031754
22	23.4	1.0	7.1	chr4	176320228	176320324	(13894231)	+	(GGCCGG)n	Simple_repeat	1	98	(0)	3035383
12	20.2	2.9	0.0	chr4	180058629	180058662	(10155893)	+	(CCTCA)n	Simple_repeat	1	35	(0)	3040276
23	19.2	0.0	6.0	chr4	180058811	180058877	(10155678)	+	GA-rich	Low_complexity	1	67	(0)	3040277
998	26.6	11.3	4.3	chr4	181949410	181949981	(8264574)	+	L2a	LINE/L2	2545	3189	(237)	3042758
3054	8.3	2.9	0.7	chr4	181949982	181950417	(8264138)	+	LTR7	LTR/ERV1	3	448	(2)	3042759
13	13.7	2.9	2.9	chr4	182144167	182144200	(8070355)	+	(CTCCT)n	Simple_repeat	1	35	(0)	3043028
29	0.0	0.0	0.0	chr4	182144203	182144227	(8070328)	+	(CA)n	Simple_repeat	1	25	(0)	3043029
14	16.3	4.7	2.2	chr4	182144437	182144479	(8070076)	+	(GGAGGCG)n	Simple_repeat	1	45	(0)	3043030
15	13.3	7.3	0.0	chr4	183504266	183504306	(6710249)	+	(CGCACGC)n	Simple_repeat	1	44	(0)	3045071
14	3.6	6.7	3.1	chr4	183504426	183504455	(6710100)	+	(CGGAG)n	Simple_repeat	1	32	(0)	3045072
26	15.6	0.0	0.0	chr4	184473891	184473934	(5740621)	+	(CA)n	Simple_repeat	1	44	(0)	3046624
35	0.0	0.0	6.5	chr4	184474081	184474126	(5740429)	+	(CCT)n	Simple_repeat	1	46	(0)	3046625
20	16.7	0.0	0.0	chr4	184474127	184474166	(5740389)	+	(GCA)n	Simple_repeat	1	40	(0)	3046626
31	17.6	2.5	2.4	chr4	184474579	184474658	(5739897)	+	(CCCTCCG)n	Simple_repeat	1	82	(0)	3046627
15	13.6	0.0	2.9	chr4	184649179	184649212	(5565343)	+	(CCCCGG)n	Simple_repeat	1	34	(0)	3046946
19	16.0	4.2	6.7	chr4	185143506	185143577	(5070978)	+	(GGCGG)n	Simple_repeat	1	75	(0)	3047770
30	0.0	0.0	5.4	chr4	185588588	185588624	(4625931)	+	(CTC)n	Simple_repeat	1	37	(0)	3048524
2435	10.1	0.0	0.0	chr4	185588627	185588914	(4625641)	C	AluSq2	SINE/Alu	(25)	288	1	3048525
1151	10.1	1.3	0.0	chr4	186888903	186889051	(3325504)	+	AluYc	SINE/Alu	139	289	(10)	3050282
14	6.6	0.0	12.2	chr4	188016923	188016963	(2197592)	+	GA-rich	Low_complexity	1	41	(0)	3051813
3920	21.4	2.5	0.2	chr5	350771	351753	(181186506)	+	L1MB5	LINE/L1	5164	6172	(2)	3055357
764	27.7	3.4	3.9	chr5	760201	760576	(180777683)	+	MLT1B	LTR/ERVL-MaLR	1	378	(12)	3055676
13	17.9	3.1	0.0	chr5	892658	892689	(180645570)	+	(GGC)n	Simple_repeat	1	33	(0)	3055778
13	28.1	0.0	4.9	chr5	892783	892843	(180645416)	+	(GCCGG)n	Simple_repeat	1	61	(0)	3055779
556	27.1	3.7	0.0	chr5	945214	945368	(180592891)	C	Arthur1B	DNA/hAT-Tip100	(993)	232	72	3055818
233	29.0	0.0	3.9	chr5	1224989	1225092	(180313167)	+	L1MD1	LINE/L1	6141	6240	(2)	3056060
27	14.6	7.4	2.3	chr5	1246817	1246897	(180291362)	+	(TCCCTCC)n	Simple_repeat	1	87	(0)	3056077
19	6.0	5.7	0.0	chr5	1473036	1473070	(180065189)	+	(CTCCTCT)n	Simple_repeat	1	37	(0)	3056279
17	36.3	0.0	0.0	chr5	1667559	1667624	(179870635)	+	GA-rich	Low_complexity	1	66	(0)	3056514
31	15.5	4.7	3.4	chr5	1830691	1830775	(179707484)	+	(CCT)n	Simple_repeat	1	89	(0)	3056698
24	14.2	5.2	4.9	chr5	1851537	1851613	(179686646)	+	(CTCCTCCT)n	Simple_repeat	1	81	(0)	3056712
755	26.8	5.0	5.6	chr5	1945174	1945493	(179592766)	+	MLT2C1	LTR/ERVL	15	332	(65)	3056810
129	16.5	4.7	4.2	chr5	3278722	3279083	(178259176)	+	(TCCT)n	Simple_repeat	1	379	(0)	3058183
21	24.4	2.9	1.4	chr5	5140251	5140319	(176397940)	+	(CCG)n	Simple_repeat	1	71	(0)	3060216
2194	9.3	0.0	0.4	chr5	5308688	5308967	(176229292)	+	AluSx	SINE/Alu	22	300	(12)	3060405
62	0.0	0.0	0.0	chr5	7850786	7850841	(173687418)	+	(GCCCAGCC)n	Simple_repeat	1	56	(0)	3063655
219	26.5	15.0	0.0	chr5	7851388	7851489	(173686770)	C	L2b	LINE/L2	(23)	3352	3233	3063656
194	31.5	1.8	0.0	chr5	10457557	10457610	(171080649)	C	MIRb	SINE/MIR	(81)	187	133	3066919
337	27.1	10.0	4.6	chr5	10457999	10458149	(171080110)	C	MER63A	DNA/hAT-Blackjack	(50)	160	1	3066920
249	34.2	4.2	1.7	chr5	10551801	10551916	(170986343)	C	MIRb	SINE/MIR	(0)	268	150	3067119
431	25.3	1.1	0.0	chr5	11897855	11897945	(169640314)	+	LTR79	LTR/ERVL	8	99	(428)	3068894
16	7.5	0.0	6.2	chr5	11903691	11903722	(169634537)	+	(CCG)n	Simple_repeat	1	32	(0)	3068898
12	12.2	3.7	0.0	chr5	11903783	11903809	(169634450)	+	(CGCCC)n	Simple_repeat	1	28	(0)	3068899
64	23.8	2.3	4.1	chr5	13991446	13991660	(167546599)	+	GA-rich	Low_complexity	1	220	(0)	3071586
771	33.7	9.8	5.6	chr5	19744661	19745889	(161792370)	C	L1MEj	LINE/L1	(842)	1318	33	3079752
12	34.2	0.0	1.7	chr5	32312855	32312914	(149225345)	+	(GCG)n	Simple_repeat	1	60	(0)	3096591
219	30.3	9.9	2.7	chr5	35229385	35229496	(146308763)	+	OldhAT1	DNA/hAT-Ac	1799	1919	(929)	3101107
14	16.1	0.0	0.0	chr5	35229763	35229790	(146308469)	+	(GCT)n	Simple_repeat	1	28	(0)	3101108
18	27.2	4.9	1.2	chr5	36876605	36876685	(144661574)	+	(CGG)n	Simple_repeat	1	85	(0)	3103485
15	22.6	4.8	0.0	chr5	38556751	38556792	(142981467)	+	(CG)n	Simple_repeat	1	44	(0)	3106292
14	19.9	4.2	2.0	chr5	39074435	39074482	(142463777)	+	(CCCCG)n	Simple_repeat	1	50	(0)	3107042
2271	9.2	0.3	0.0	chr5	43120440	43120734	(138417525)	C	AluSx1	SINE/Alu	(16)	296	1	3112575
34	5.3	0.0	0.0	chr5	50666898	50666937	(130871322)	+	(CCT)n	Simple_repeat	1	40	(0)	3116800
13	26.3	0.0	5.5	chr5	54518246	54518300	(127019959)	+	(GCC)n	Simple_repeat	1	55	(0)	3121857
21	18.5	1.3	7.6	chr5	65722126	65722203	(115816056)	+	G-rich	Low_complexity	1	79	(0)	3138300
20	20.9	5.3	2.5	chr5	65925814	65925888	(115612371)	+	(CCCT)n	Simple_repeat	1	79	(0)	3138688
23	11.5	0.0	0.0	chr5	65926105	65926142	(115612117)	+	(GGAC)n	Simple_repeat	1	38	(0)	3138689
15	0.0	0.0	0.0	chr5	66596841	66596859	(114941400)	+	(GCC)n	Simple_repeat	1	19	(0)	3139672
17	4.3	0.0	0.0	chr5	72107258	72107281	(109430978)	+	(TCC)n	Simple_repeat	1	24	(0)	3148506
16	21.0	4.1	5.3	chr5	72107366	72107438	(109430821)	+	(CGCGGAG)n	Simple_repeat	1	76	(0)	3148507
210	19.4	0.0	0.0	chr5	72126276	72126311	(109411948)	+	MIR3	SINE/MIR	125	160	(48)	3148530
12	10.1	9.4	0.0	chr5	72320529	72320560	(109217699)	+	G-rich	Low_complexity	1	35	(0)	3148804
2540	6.9	0.3	0.0	chr5	72320798	72321103	(109217156)	C	AluSx3	SINE/Alu	(4)	307	1	3148805
8714	12.3	12.0	0.3	chr5	72925317	72926709	(108611550)	+	LTR12C	LTR/ERV1	1	1579	(0)	3149719
171	15.5	0.9	2.1	chr5	73312835	73313159	(108225100)	+	(CCT)n	Simple_repeat	1	328	(0)	3150305
21	21.1	0.0	0.0	chr5	73448242	73448300	(108089959)	+	(CGTCCT)n	Simple_repeat	1	59	(0)	3150486
25	10.1	2.3	0.0	chr5	74640843	74640885	(106897374)	+	(AGG)n	Simple_repeat	1	44	(0)	3152271
12	0.0	8.0	3.7	chr5	75511355	75511379	(106026880)	+	(CCG)n	Simple_repeat	1	27	(0)	3153647
13	10.0	0.0	0.0	chr5	78985153	78985174	(102553085)	+	(CAG)n	Simple_repeat	1	22	(0)	3158885
15	17.4	6.7	0.0	chr5	79689801	79689845	(101848414)	+	G-rich	Low_complexity	1	48	(0)	3160220
17	13.3	0.0	0.0	chr5	79689868	79689900	(101848359)	+	(CGGCCC)n	Simple_repeat	1	33	(0)	3160221
25	24.0	4.4	1.1	chr5	79689961	79690050	(101848209)	+	(GGAGGC)n	Simple_repeat	1	94	(0)	3160222
224	27.0	2.6	2.6	chr5	80109874	80109949	(101428310)	+	MIRc	SINE/MIR	134	209	(59)	3160879
326	24.5	7.8	0.0	chr5	80110250	80110343	(101427916)	C	MER5A1	DNA/hAT-Charlie	(35)	131	30	3160880
297	26.8	9.2	2.1	chr5	80110899	80111039	(101427220)	C	L1ME4a	LINE/L1	(2)	6122	5971	3160881
18042	11.9	3.9	1.1	chr5	81269746	81273081	(100265178)	+	L1PB1	LINE/L1	407	3847	(3015)	3162920
16	22.3	0.0	2.3	chr5	83471655	83471698	(98066561)	+	(CCT)n	Simple_repeat	1	44	(0)	3166013
20	32.6	3.2	1.0	chr5	83473435	83473527	(98064732)	+	(TC)n	Simple_repeat	1	96	(0)	3166014
12	4.7	4.5	0.0	chr5	83473608	83473629	(98064630)	+	(AGGG)n	Simple_repeat	1	23	(0)	3166015
107	3.6	0.9	0.0	chr5	88676322	88676436	(92861823)	+	(TCC)n	Simple_repeat	1	116	(0)	3172658
46	0.0	0.0	0.0	chr5	88684765	88684803	(92853456)	+	(TC)n	Simple_repeat	1	39	(0)	3172665
27	3.5	0.0	0.0	chr5	88684986	88685015	(92853244)	+	(AGG)n	Simple_repeat	1	30	(0)	3172666
15	24.4	2.9	4.3	chr5	88883183	88883250	(92655009)	+	(GCGA)n	Simple_repeat	1	70	(0)	3172895
22	29.9	1.4	0.0	chr5	88883219	88883287	(92654972)	+	(GC)n	Simple_repeat	1	70	(0)	3172896
42	7.2	0.0	1.6	chr5	88883299	88883360	(92654899)	+	(GGA)n	Simple_repeat	1	62	(0)	3172897
11	27.4	1.6	4.8	chr5	90474401	90474462	(91063797)	+	GA-rich	Low_complexity	1	63	(0)	3174832
17	21.0	0.0	5.5	chr5	95284055	95284109	(86254150)	+	GA-rich	Low_complexity	1	55	(0)	3180923
42	15.6	2.3	1.1	chr5	95284570	95284656	(86253603)	+	(CTC)n	Simple_repeat	1	89	(0)	3180924
22	9.5	0.0	0.0	chr5	95284666	95284699	(86253560)	+	(GCG)n	Simple_repeat	1	34	(0)	3180925
28	14.7	3.2	1.6	chr5	103258663	103258724	(78279535)	+	GA-rich	Low_complexity	1	64	(0)	3191197
52	6.4	0.0	0.0	chr5	103263200	103263264	(78274995)	+	(CCT)n	Simple_repeat	1	65	(0)	3191204
1475	26.8	9.6	2.2	chr5	110253962	110255284	(71282975)	+	L1MEg2	LINE/L1	3715	5212	(2242)	3200013
225	27.1	4.5	2.3	chr5	110255415	110255501	(71282758)	+	L3	LINE/CR1	4007	4095	(4)	3200014
640	15.9	9.8	0.0	chr5	111091902	111092058	(70446201)	C	L1MC5	LINE/L1	(191)	9113	8940	3200971
20	25.9	5.6	1.1	chr5	111224137	111224183	(70314076)	+	G-rich	Low_complexity	1	91	(0)	3201161
13	15.8	2.6	5.0	chr5	111224184	111224222	(70314037)	+	GA-rich	Low_complexity	1	40	(0)	3201162
24	15.1	0.0	5.3	chr5	111224406	111224462	(70313797)	+	(GGC)n	Simple_repeat	1	57	(0)	3201163
18	27.9	0.0	2.9	chr5	111757614	111757681	(69780578)	+	(CGCACCC)n	Simple_repeat	1	68	(0)	3201827
15	19.4	0.0	4.4	chr5	112707984	112708028	(68830231)	+	(CTCTCCC)n	Simple_repeat	1	45	(0)	3203153
36	21.7	0.0	1.2	chr5	113488327	113488409	(68049850)	+	(CGC)n	Simple_repeat	1	83	(0)	3204364
12	20.0	5.0	0.0	chr5	115262801	115262840	(66275419)	+	(CCGCTCA)n	Simple_repeat	1	42	(0)	3206534
560	23.0	2.0	8.1	chr5	116361002	116361162	(65177097)	C	MIR	SINE/MIR	(88)	174	24	3208023
14	18.9	2.8	0.0	chr5	123035496	123035531	(58502728)	+	(CCT)n	Simple_repeat	1	37	(0)	3216854
22	10.1	0.0	0.0	chr5	126423817	126423848	(55114411)	+	(CT)n	Simple_repeat	1	32	(0)	3221158
394	22.3	16.4	1.6	chr5	127229053	127229229	(54309030)	+	MIRc	SINE/MIR	50	265	(3)	3222562
17	9.1	2.6	5.0	chr5	127229598	127229636	(54308623)	+	(CGAGG)n	Simple_repeat	1	40	(0)	3222563
13	26.1	0.0	4.1	chr5	128083381	128083429	(53454830)	+	GA-rich	Low_complexity	1	49	(0)	3223722
18	32.4	1.9	3.7	chr5	128538382	128538488	(52999771)	+	G-rich	Low_complexity	1	109	(0)	3224262
20	19.5	3.3	1.6	chr5	129904392	129904451	(51633808)	+	GA-rich	Low_complexity	1	62	(0)	3225895
30	20.4	2.4	2.4	chr5	129904499	129904580	(51633679)	+	(GCC)n	Simple_repeat	1	84	(0)	3225896
535	21.8	12.1	10.1	chr5	132556531	132556749	(48981510)	C	Charlie1	DNA/hAT-Charlie	(2555)	226	3	3229557
24	8.6	0.0	2.5	chr5	132776152	132776191	(48762068)	+	(CCT)n	Simple_repeat	1	40	(0)	3229897
736	32.9	7.6	1.7	chr5	134088584	134088991	(47449268)	C	L1ME3B	LINE/L1	(0)	6242	5809	3231926
15	15.0	6.5	2.0	chr5	134527187	134527232	(47011027)	+	(TCCC)n	Simple_repeat	1	49	(0)	3232771
15	15.9	2.1	6.1	chr5	135457842	135457889	(46080370)	+	(GAGCAG)n	Simple_repeat	1	49	(0)	3234316
20	17.5	5.4	1.7	chr5	137754199	137754254	(43784005)	+	GA-rich	Low_complexity	1	59	(0)	3237463
15	18.1	0.0	0.0	chr5	137754305	137754336	(43783923)	+	(GCC)n	Simple_repeat	1	32	(0)	3237464
14	12.0	0.0	3.5	chr5	138464200	138464228	(43074031)	+	GA-rich	Low_complexity	1	29	(0)	3238914
15	4.1	4.0	0.0	chr5	138465013	138465037	(43073222)	+	(AGGG)n	Simple_repeat	1	26	(0)	3238915
397	25.1	17.3	7.7	chr5	139404846	139405043	(42133216)	C	MIR	SINE/MIR	(1)	261	27	3240701
803	6.3	0.0	0.0	chr5	139517453	139517547	(42020712)	+	AluSx3	SINE/Alu	191	285	(26)	3240924
35	0.0	0.0	2.7	chr5	139517548	139517584	(42020675)	+	(AAAT)n	Simple_repeat	1	37	(0)	3240925
21	18.5	0.0	0.0	chr5	139561527	139561569	(41976690)	+	(GGC)n	Simple_repeat	1	43	(0)	3241047
15	15.5	3.4	8.2	chr5	139648213	139648271	(41889988)	+	GA-rich	Low_complexity	1	61	(0)	3241240
23	24.5	1.2	4.7	chr5	139648335	139648418	(41889841)	+	(GGC)n	Simple_repeat	1	85	(0)	3241241
12	9.1	7.7	4.8	chr5	139648420	139648458	(41889801)	+	(AGAGC)n	Simple_repeat	1	42	(0)	3241242
14	8.2	0.0	3.6	chr5	139648486	139648513	(41889746)	+	(CCCAG)n	Simple_repeat	1	28	(0)	3241243
728	29.1	1.1	1.7	chr5	139675615	139675856	(41862403)	+	MIRb	SINE/MIR	20	260	(8)	3241292
20	20.9	7.5	3.0	chr5	139795707	139795827	(41742432)	+	(CCCT)n	Simple_repeat	1	126	(0)	3241544
12	9.7	8.6	2.6	chr5	139795890	139795924	(41742335)	+	(CGG)n	Simple_repeat	1	38	(0)	3241545
18	0.0	0.0	3.9	chr5	140107832	140107857	(41430402)	+	(GCG)n	Simple_repeat	1	26	(0)	3242039
13	26.8	1.6	4.7	chr5	140107984	140108009	(41430250)	+	(CCT)n	Simple_repeat	1	45	(19)	3242040
13	7.6	7.1	0.0	chr5	140108010	140108037	(41430222)	+	(CCCG)n	Simple_repeat	1	30	(0)	3242041
13	26.8	1.6	4.7	chr5	140108038	140108046	(41430213)	+	(CCT)n	Simple_repeat	46	64	(0)	3242040
21	29.8	1.3	1.2	chr5	140402111	140402189	(41136070)	+	(GGC)n	Simple_repeat	1	80	(0)	3242550
46	6.0	0.0	0.0	chr5	140648008	140648060	(40890199)	+	(GT)n	Simple_repeat	1	53	(0)	3242991
371	30.6	5.8	7.7	chr5	140648156	140648448	(40889811)	+	L2c	LINE/L2	3035	3356	(19)	3242992
18	10.6	0.0	9.8	chr5	141747419	141747469	(39790790)	+	G-rich	Low_complexity	1	51	(0)	3244527
13	16.6	0.0	0.0	chr5	141839375	141839401	(39698858)	+	(TCA)n	Simple_repeat	1	27	(0)	3244720
15	29.0	3.2	0.0	chr5	141876360	141876422	(39661837)	+	(GCCGGC)n	Simple_repeat	1	65	(0)	3244777
247	17.4	6.8	4.2	chr5	141968852	141968923	(39569336)	+	MER5A	DNA/hAT-Charlie	27	100	(89)	3244973
14	13.2	2.9	2.8	chr5	142326556	142326590	(39211669)	+	G-rich	Low_complexity	1	36	(0)	3245725
12	25.9	2.4	0.0	chr5	142491566	142491607	(39046652)	+	G-rich	Low_complexity	1	43	(0)	3246113
303	11.1	10.0	0.0	chr5	142539122	142539193	(38999066)	+	L1MC4	LINE/L1	7690	7769	(273)	3246192
526	13.1	1.8	6.1	chr5	142539304	142539417	(38998842)	+	Tigger2a	DNA/TcMar-Tigger	1	109	(325)	3246201
1920	16.8	7.1	1.8	chr5	142539543	142539942	(38998317)	+	Tigger2	DNA/TcMar-Tigger	2296	2718	(0)	3246202
8103	20.1	3.5	3.4	chr5	143931210	143933496	(37604763)	+	L1MA2	LINE/L1	14	2401	(5164)	3248502
13	8.5	4.0	0.0	chr5	147453505	147453529	(34084730)	+	(AGGG)n	Simple_repeat	1	26	(0)	3254263
13	21.3	0.0	2.4	chr5	149406515	149406524	(32131735)	+	(CCCT)n	Simple_repeat	1	10	(0)	3257661
49	0.0	0.0	0.0	chr5	149406525	149406568	(32131691)	+	(TCC)n	Simple_repeat	1	44	(0)	3257662
13	21.3	0.0	2.4	chr5	149406569	149406598	(32131661)	+	(CCCT)n	Simple_repeat	3	31	(0)	3257663
12	22.6	0.0	2.6	chr5	149730149	149730186	(31808073)	+	(CCCCCG)n	Simple_repeat	1	38	(0)	3258409
22	20.1	4.2	2.7	chr5	149730222	149730293	(31807966)	+	(CCTC)n	Simple_repeat	1	75	(0)	3258410
1134	24.1	3.2	0.7	chr5	150130825	150131129	(31407130)	+	MER113	DNA/hAT-Charlie	134	446	(75)	3259269
42	0.0	0.0	2.3	chr5	150245339	150245381	(31292878)	+	(CCT)n	Simple_repeat	1	43	(0)	3259528
190	25.9	9.6	2.3	chr5	150539445	150539531	(30998728)	+	MIR3	SINE/MIR	6	99	(109)	3260198
418	27.0	12.2	0.4	chr5	150614891	150615093	(30923166)	+	MIR	SINE/MIR	13	268	(0)	3260363
14	12.0	5.3	2.5	chr5	150672266	150672303	(30865956)	+	G-rich	Low_complexity	1	40	(0)	3260490
294	31.2	12.5	0.7	chr5	151157894	151158048	(30380211)	C	MIR3	SINE/MIR	(3)	205	30	3261276
18	0.0	0.0	0.0	chr5	151924884	151924903	(29613356)	+	(T)n	Simple_repeat	1	20	(0)	3262871
1961	11.3	6.1	0.7	chr5	154691799	154692091	(26846168)	C	AluSx	SINE/Alu	(2)	310	1	3267797
351	26.4	3.5	0.9	chr5	156913748	156913858	(24624401)	+	MIRc	SINE/MIR	40	153	(115)	3271607
39	0.0	0.0	0.0	chr5	156949419	156949454	(24588805)	+	(CCT)n	Simple_repeat	1	36	(0)	3271691
17	0.0	0.0	4.5	chr5	156949455	156949472	(24588787)	+	(CT)n	Simple_repeat	2	19	(0)	3271692
297	21.0	0.0	1.6	chr5	160370271	160370333	(21167926)	+	MIRb	SINE/MIR	206	267	(1)	3278045
14	0.0	0.0	0.0	chr5	160370447	160370464	(21167795)	+	(TCC)n	Simple_repeat	1	18	(0)	3278046
13	13.2	0.0	0.0	chr5	166979574	166979598	(14558661)	+	(TTTC)n	Simple_repeat	1	25	(0)	3287638
466	20.9	7.9	0.0	chr5	170633377	170633505	(10904754)	C	L2a	LINE/L2	(258)	3168	3029	3294003
20	3.3	3.2	0.0	chr5	170862656	170862686	(10675573)	+	(CGGGCG)n	Simple_repeat	1	32	(0)	3294427
29	27.4	4.1	3.3	chr5	172284162	172284320	(9253939)	+	GA-rich	Low_complexity	1	160	(0)	3297094
1496	19.6	2.4	7.7	chr5	172291569	172291850	(9246409)	C	L1MB7	LINE/L1	(1250)	4896	4603	3297103
1548	7.1	2.6	9.6	chr5	172291871	172292059	(9246200)	C	L1PA14	LINE/L1	(9)	6152	5973	3297116
2377	9.2	1.3	0.0	chr5	172292060	172292362	(9245897)	C	AluSx1	SINE/Alu	(5)	307	1	3297117
17	29.4	0.0	4.3	chr5	172575240	172575309	(8962950)	+	GA-rich	Low_complexity	1	70	(0)	3297749
307	33.6	1.6	0.8	chr5	172575387	172575512	(8962747)	C	MIR3	SINE/MIR	(56)	152	26	3297750
16	15.8	4.5	2.2	chr5	172683572	172683615	(8854644)	+	(GCC)n	Simple_repeat	1	46	(0)	3297973
180	29.4	15.0	0.0	chr5	172926867	172926934	(8611325)	C	MIRc	SINE/MIR	(156)	112	33	3298531
226	33.0	5.4	0.0	chr5	173203314	173203401	(8334858)	+	LTR16E1	LTR/ERVL	178	270	(268)	3299161
16	4.0	3.9	0.0	chr5	173203410	173203435	(8334824)	+	(CCCTC)n	Simple_repeat	1	27	(0)	3299162
127	1.2	4.0	3.9	chr5	173203436	173203610	(8334649)	+	(TCTT)n	Simple_repeat	1	182	(0)	3299163
38	0.0	0.0	0.0	chr5	173235351	173235391	(8302868)	+	(A)n	Simple_repeat	1	41	(0)	3299238
31	20.4	3.4	2.2	chr5	173328239	173328327	(8209932)	+	(CTC)n	Simple_repeat	1	92	(0)	3299412
353	29.9	8.2	2.5	chr5	175729378	175729538	(5808721)	C	Arthur1A	DNA/hAT-Tip100	(4)	173	3	3304008
13	4.8	12.5	3.7	chr5	176630473	176630494	(4907765)	+	(CTCGCGCAG)n	Simple_repeat	1	25	(0)	3305697
27	0.0	0.0	0.0	chr5	176630495	176630520	(4907739)	+	(GCTCCG)n	Simple_repeat	1	26	(0)	3305698
13	4.8	12.5	3.7	chr5	176630521	176630545	(4907714)	+	(CTCGCGCAG)n	Simple_repeat	8	33	(0)	3305699
450	29.1	3.2	8.5	chr5	176630697	176630861	(4907398)	+	MIRb	SINE/MIR	2	157	(111)	3305700
392	31.4	7.5	0.6	chr5	176784458	176784630	(4753629)	C	MLT1K	LTR/ERVL-MaLR	(329)	266	81	3305982
36	1.5	8.2	3.8	chr5	176850920	176850992	(4687267)	+	(TCCCAGGACT)n	Simple_repeat	1	79	(0)	3306110
405	20.3	19.2	2.0	chr5	176851104	176851249	(4687010)	+	MIR	SINE/MIR	15	191	(71)	3306111
84	15.2	3.9	1.6	chr5	176863706	176863884	(4674375)	+	(CTC)n	Simple_repeat	1	186	(0)	3306134
1894	14.2	2.0	0.3	chr5	177117366	177117654	(4420605)	+	AluJb	SINE/Alu	2	295	(17)	3306699
14	25.5	3.9	4.9	chr5	177363270	177363347	(4174912)	+	G-rich	Low_complexity	1	81	(0)	3307264
12	19.1	2.6	2.6	chr5	177366812	177366849	(4171410)	+	G-rich	Low_complexity	1	39	(0)	3307273
255	39.1	0.0	1.8	chr5	177402766	177402877	(4135382)	C	MIR	SINE/MIR	(43)	219	110	3307345
12	31.1	1.8	0.0	chr5	177404202	177404256	(4134003)	+	G-rich	Low_complexity	1	56	(0)	3307346
14	24.3	2.0	2.0	chr5	177455933	177455982	(4082277)	+	(GCCCT)n	Simple_repeat	1	51	(0)	3307453
189	24.5	0.0	0.0	chr5	177469462	177469511	(4068748)	+	MIRc	SINE/MIR	112	163	(67)	3307476
202	26.3	5.0	0.0	chr5	177508697	177508753	(4029506)	+	MIRb	SINE/MIR	39	98	(170)	3307551
16	14.2	5.1	0.0	chr5	178113402	178113440	(3424819)	+	G-rich	Low_complexity	1	41	(0)	3308587
18	24.7	7.6	1.0	chr5	178113595	178113686	(3424573)	+	(CCGGCG)n	Simple_repeat	1	99	(0)	3308588
5052	15.4	2.7	0.4	chr5	179059219	179060061	(2478198)	+	L1MA4A	LINE/L1	5436	6298	(5)	3310303
477	29.8	7.3	2.4	chr5	179195386	179195633	(2342626)	+	MER102b	DNA/hAT-Charlie	16	276	(65)	3310482
12	16.5	0.0	0.0	chr5	179795688	179795714	(1742545)	+	(GGCGG)n	Simple_repeat	1	27	(0)	3311603
2176	7.3	2.7	3.6	chr5	180090667	180090969	(1447290)	C	AluSz	SINE/Alu	(12)	300	1	3312066
15	20.0	0.0	5.9	chr5	180292171	180292221	(1246038)	+	G-rich	Low_complexity	1	51	(0)	3312366
244	30.8	10.1	5.2	chr5	180315478	180315705	(1222554)	+	L1MC5a	LINE/L1	2532	2775	(2)	3312407
38	2.6	0.0	0.0	chr5	180353293	180353332	(1184927)	+	(CTCCGTGGG)n	Simple_repeat	1	40	(0)	3312466
12	8.0	0.0	9.4	chr5	180353383	180353414	(1184845)	+	G-rich	Low_complexity	1	32	(0)	3312467
12	17.5	3.1	0.0	chr5	180649090	180649121	(889138)	+	(CGGCG)n	Simple_repeat	1	33	(0)	3313019
16	16.8	1.9	5.7	chr5	180649257	180649308	(888951)	+	(GGCCC)n	Simple_repeat	1	53	(0)	3313020
235	28.4	9.1	1.7	chr5	180831010	180831181	(707078)	C	MER67A	LTR/ERV1	(475)	186	1	3313310
13	0.0	0.0	0.0	chr5	180831186	180831202	(707057)	+	(CCG)n	Simple_repeat	1	17	(0)	3313311
834	10.4	0.0	0.0	chr5	180831416	180831530	(706729)	C	AluSq2	SINE/Alu	(17)	296	182	3313312
638	0.0	1.4	0.0	chr5	181191687	181191758	(346501)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	3313826
13	9.3	5.3	5.0	chr5	181191960	181191997	(346262)	+	G-rich	Low_complexity	1	40	(0)	3313827
37	14.8	4.2	3.0	chr6	1382035	1382129	(169423850)	+	(GCGGAG)n	Simple_repeat	1	99	(0)	3316028
1519	21.2	2.2	4.6	chr6	1524332	1524697	(169281282)	C	MLT1A0	LTR/ERVL-MaLR	(8)	357	1	3316257
84	4.9	1.9	0.9	chr6	2797848	2797955	(168008024)	+	(CTC)n	Simple_repeat	1	110	(0)	3317932
17	15.6	0.0	0.0	chr6	2798101	2798129	(168007850)	+	(T)n	Simple_repeat	1	29	(0)	3317933
5253	14.7	2.6	0.6	chr6	2925865	2926704	(167879275)	C	LTR5B	LTR/ERVK	(145)	857	1	3318112
190	19.4	7.7	11.1	chr6	2952809	2952889	(167853090)	C	MamRTE1	LINE/RTE-BovB	(1252)	2560	2483	3318154
15	27.1	4.5	0.0	chr6	3068925	3068990	(167736989)	+	G-rich	Low_complexity	1	69	(0)	3318348
11	13.2	5.7	2.7	chr6	3227708	3227742	(167578237)	+	(CAGCCCC)n	Simple_repeat	1	37	(0)	3318604
32	3.0	0.0	0.0	chr6	3457092	3457125	(167348854)	+	(CTC)n	Simple_repeat	1	34	(0)	3318917
61	29.6	3.0	5.6	chr6	4135582	4135982	(166669997)	+	G-rich	Low_complexity	1	413	(0)	3320017
19	7.2	0.0	0.0	chr6	4136504	4136533	(166669446)	+	(AAAAC)n	Simple_repeat	1	30	(0)	3320018
14	24.4	0.0	6.6	chr6	6320838	6320898	(164485081)	+	(TCCCAT)n	Simple_repeat	1	61	(0)	3323249
722	26.5	8.3	4.6	chr6	6772843	6773257	(164032722)	C	LTR16	LTR/ERVL	(3)	435	4	3323882
434	24.5	5.6	15.3	chr6	6773261	6773478	(164032501)	+	L2a	LINE/L2	3210	3405	(21)	3323883
26	0.0	3.0	2.9	chr6	7108317	7108349	(163697630)	+	(TCC)n	Simple_repeat	1	34	(0)	3324625
14	0.0	0.0	0.0	chr6	10386051	10386068	(160419911)	+	(AGG)n	Simple_repeat	1	18	(0)	3329429
14	18.5	7.0	0.0	chr6	12013074	12013116	(158792863)	+	GA-rich	Low_complexity	1	46	(0)	3332079
12	8.9	4.2	0.0	chr6	12013137	12013160	(158792819)	+	(CCT)n	Simple_repeat	1	25	(0)	3332080
30	14.2	1.8	0.0	chr6	12887004	12887058	(157918921)	+	(CTC)n	Simple_repeat	1	56	(0)	3333362
20	10.4	0.0	0.0	chr6	13328502	13328533	(157477446)	+	(CGC)n	Simple_repeat	1	32	(0)	3334060
17	13.4	0.0	2.9	chr6	13924389	13924423	(156881556)	+	GA-rich	Low_complexity	1	35	(0)	3335168
18	19.2	2.0	2.0	chr6	13924572	13924620	(156881359)	+	(GGT)n	Simple_repeat	1	50	(0)	3335169
59	18.1	6.5	0.0	chr6	14276867	14277019	(156528960)	+	(TCCTCT)n	Simple_repeat	1	163	(0)	3335735
232	23.4	0.0	0.0	chr6	14277118	14277164	(156528815)	+	UCON105	Unknown	210	256	(17)	3335736
554	33.3	11.2	0.9	chr6	15061244	15061585	(155744394)	C	L2b	LINE/L2	(3)	3372	2991	3337126
2310	10.8	0.3	0.0	chr6	15061591	15061896	(155744083)	C	AluSz6	SINE/Alu	(4)	308	2	3337127
13	8.1	3.6	3.5	chr6	16761363	16761390	(154044589)	+	(TGC)n	Simple_repeat	1	29	(0)	3340016
39	1.8	5.0	3.2	chr6	16761485	16761544	(154044435)	+	(CTC)n	Simple_repeat	1	63	(0)	3340017
13	15.4	5.3	2.5	chr6	17393473	17393510	(153412469)	+	(CCT)n	Simple_repeat	1	40	(0)	3341078
14	19.8	1.7	6.7	chr6	17393641	17393699	(153412280)	+	G-rich	Low_complexity	1	60	(0)	3341079
15	30.2	1.6	0.0	chr6	17393764	17393824	(153412155)	+	G-rich	Low_complexity	1	62	(0)	3341080
18	12.8	0.0	0.0	chr6	18122654	18122687	(152683292)	+	(ACGGTC)n	Simple_repeat	1	34	(0)	3342482
248	28.3	5.0	0.0	chr6	18122833	18122963	(152683016)	C	MIRc	SINE/MIR	(78)	190	45	3342483
29	8.3	1.9	1.9	chr6	18263848	18263900	(152542079)	+	(TCC)n	Simple_repeat	1	54	(0)	3342727
13	28.4	3.0	2.9	chr6	21665926	21665992	(149139987)	+	GA-rich	Low_complexity	1	69	(0)	3348061
15	16.9	6.1	1.9	chr6	22222692	22222763	(148583216)	+	(CTCCTCC)n	Simple_repeat	1	75	(0)	3348984
491	27.6	10.6	8.2	chr6	26122929	26123343	(144682636)	C	MER101	LTR/ERV1	(36)	438	13	3354667
239	23.8	3.4	6.7	chr6	26342201	26342290	(144463689)	C	MIRc	SINE/MIR	(17)	251	165	3355063
22	6.3	0.0	2.9	chr6	26383859	26383893	(144422086)	+	(CCT)n	Simple_repeat	1	35	(0)	3355154
12	19.7	2.3	4.4	chr6	26501645	26501688	(144304291)	+	(CGCCGAG)n	Simple_repeat	1	45	(0)	3355355
597	5.6	0.0	0.0	chr6	26553503	26553574	(144252405)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	3355456
556	23.8	7.4	1.0	chr6	27252055	27252249	(143553730)	+	MIRb	SINE/MIR	26	243	(25)	3356581
813	9.2	1.8	0.0	chr6	27814014	27814122	(142991857)	+	AluSx	SINE/Alu	1	111	(201)	3357639
19	4.5	0.0	0.0	chr6	27814166	27814188	(142991791)	+	(A)n	Simple_repeat	1	23	(0)	3357640
1723	8.8	1.4	0.0	chr6	27824836	27825052	(142980927)	C	AluSc	SINE/Alu	(56)	253	34	3357657
230	2.6	20.8	0.0	chr6	27873483	27873520	(142932459)	+	LTR10B1	LTR/ERV1	210	257	(290)	3357740
27	13.0	0.0	0.0	chr6	28589832	28589873	(142216106)	+	(T)n	Simple_repeat	1	42	(0)	3358870
18	13.7	1.7	8.3	chr6	29632912	29632970	(141173009)	+	(CCTCCC)n	Simple_repeat	1	60	(0)	3360372
22	15.1	1.8	3.6	chr6	29633070	29633124	(141172855)	+	G-rich	Low_complexity	1	56	(0)	3360373
321	22.2	3.8	5.6	chr6	29850143	29850304	(140955675)	+	FordPrefect	DNA/hAT-Tip100	797	955	(728)	3360746
13	22.5	2.0	3.9	chr6	30345413	30345462	(140460517)	+	G-rich	Low_complexity	1	51	(0)	3361461
16	20.9	0.0	0.0	chr6	30345612	30345644	(140460335)	+	G-rich	Low_complexity	1	33	(0)	3361462
1405	13.4	0.8	8.6	chr6	30721887	30722155	(140083824)	+	AluJr	SINE/Alu	40	287	(25)	3362084
15	21.8	2.7	0.0	chr6	31739966	31740002	(139065977)	+	(GC)n	Simple_repeat	1	38	(0)	3363802
20	14.9	0.0	0.0	chr6	31740568	31740604	(139065375)	+	(GGA)n	Simple_repeat	1	37	(0)	3363803
2372	9.6	0.0	0.0	chr6	31740680	31740982	(139064997)	+	AluSx	SINE/Alu	2	304	(8)	3363804
312	27.5	2.7	0.9	chr6	31740999	31741108	(139064871)	+	MIRb	SINE/MIR	99	210	(58)	3363805
14	17.5	0.0	9.3	chr6	32109351	32109404	(138696575)	+	GA-rich	Low_complexity	1	54	(0)	3364396
12	23.6	1.8	5.4	chr6	32254977	32255031	(138550948)	+	G-rich	Low_complexity	1	56	(0)	3364642
16	23.5	0.0	0.0	chr6	32970868	32970899	(137835080)	+	G-rich	Low_complexity	1	32	(0)	3365687
1594	28.3	10.6	2.5	chr6	33012718	33013624	(137792355)	C	L1MEh	LINE/L1	(501)	1734	746	3365756
351	25.0	7.9	6.7	chr6	33013820	33013969	(137792010)	C	L1MEh	LINE/L1	(1828)	407	256	3365756
250	17.1	8.4	5.0	chr6	33116466	33116545	(137689434)	C	L2b	LINE/L2	(223)	3152	3070	3365859
209	34.6	7.2	1.9	chr6	33116764	33116869	(137689110)	C	MIR3	SINE/MIR	(57)	151	40	3365860
13	13.6	10.0	1.8	chr6	33117372	33117421	(137688558)	+	(GGAGGAT)n	Simple_repeat	1	55	(0)	3365861
83	18.2	2.5	5.6	chr6	33420013	33420256	(137385723)	+	(CCT)n	Simple_repeat	1	250	(0)	3366422
247	28.0	14.2	2.1	chr6	33454055	33454248	(137351731)	+	MIRb	SINE/MIR	20	253	(15)	3366469
798	10.1	4.6	3.9	chr6	33711185	33711313	(137094666)	C	AluJo	SINE/Alu	(182)	130	1	3367015
439	23.2	9.4	1.9	chr6	33711314	33711370	(137094609)	C	MER5B	DNA/hAT-Charlie	(115)	63	7	3367014
1953	13.5	0.0	4.6	chr6	34041972	34042274	(136763705)	+	AluSx1	SINE/Alu	3	291	(21)	3367528
493	28.4	13.1	5.8	chr6	34042275	34042380	(136763599)	C	MIR	SINE/MIR	(145)	123	8	3367527
13	19.1	0.0	0.0	chr6	34142690	34142719	(136663260)	+	(TCGC)n	Simple_repeat	1	30	(0)	3367710
16	7.4	3.2	3.1	chr6	34142809	34142839	(136663140)	+	(GGA)n	Simple_repeat	1	32	(0)	3367711
291	25.6	11.3	5.7	chr6	34142950	34143090	(136662889)	+	MamTip2	DNA/hAT-Tip100	74	223	(82)	3367712
206	37.1	2.0	0.0	chr6	34147209	34147305	(136658674)	C	L2c	LINE/L2	(1)	3386	3288	3367716
304	27.7	13.0	0.0	chr6	34147441	34147575	(136658404)	+	MIR	SINE/MIR	22	173	(95)	3367717
602	27.7	7.8	0.5	chr6	34200362	34200564	(136605415)	C	L2b	LINE/L2	(202)	3173	2955	3367834
765	23.9	15.3	0.8	chr6	34200706	34200950	(136605029)	C	MLT1J	LTR/ERVL-MaLR	(159)	353	67	3367839
17	16.8	2.5	0.0	chr6	34462555	34462594	(136343385)	+	(TCTCCCC)n	Simple_repeat	1	41	(0)	3368458
59	21.5	0.7	3.3	chr6	35213818	35213969	(135592010)	+	GA-rich	Low_complexity	1	153	(0)	3369926
234	27.4	9.5	0.0	chr6	36810676	36810770	(133995209)	C	MIR3	SINE/MIR	(19)	189	85	3373339
17	27.3	1.6	1.6	chr6	36986054	36986116	(133819863)	+	(AGCTCC)n	Simple_repeat	1	64	(0)	3373669
14	29.1	2.5	3.7	chr6	36986351	36986430	(133819549)	+	G-rich	Low_complexity	1	82	(0)	3373670
528	24.7	15.3	1.0	chr6	37029047	37029242	(133776737)	C	MIRb	SINE/MIR	(18)	250	22	3373761
19	31.8	3.8	1.8	chr6	37029270	37029375	(133776604)	+	GA-rich	Low_complexity	1	110	(0)	3373762
1387	16.7	0.0	0.0	chr6	37060044	37060247	(133745732)	C	AluJb	SINE/Alu	(89)	223	20	3373833
206	24.6	2.0	0.0	chr6	37060249	37060308	(133745671)	C	MIR3	SINE/MIR	(69)	161	96	3373834
2035	9.6	4.6	0.4	chr6	37060520	37060790	(133745189)	+	AluSq2	SINE/Alu	1	283	(30)	3373835
14	25.3	2.0	2.0	chr6	37649091	37649139	(133156840)	+	(CGG)n	Simple_repeat	1	50	(0)	3375062
35	32.1	0.0	3.2	chr6	37819784	37819806	(132986173)	+	(CCCGCC)n	Simple_repeat	1	35	(115)	3375438
19	11.5	8.1	4.5	chr6	37819807	37819868	(132986111)	+	(CGCC)n	Simple_repeat	1	67	(0)	3375439
513	33.8	6.8	3.2	chr6	38229621	38229959	(132576020)	C	Plat_L3	LINE/CR1	(635)	2951	2647	3376070
920	31.2	5.7	4.1	chr6	38229977	38230213	(132575766)	+	L2a	LINE/L2	2571	2816	(603)	3376071
829	22.7	10.2	10.2	chr6	38688296	38688579	(132117400)	+	MER90	LTR/ERV1	1	284	(291)	3376792
644	22.9	3.5	4.0	chr6	38688580	38688752	(132117227)	+	MER76	LTR/ERVL	1	172	(519)	3376793
1101	24.6	7.9	8.0	chr6	38688767	38689291	(132116688)	+	MLT1E2	LTR/ERVL-MaLR	61	565	(62)	3376794
419	27.4	11.1	6.2	chr6	40329014	40329336	(130476643)	C	L2c	LINE/L2	(25)	3362	3022	3379289
358	27.0	8.9	1.0	chr6	40329591	40329729	(130476250)	C	MIRc	SINE/MIR	(106)	162	13	3379290
824	19.9	0.0	0.0	chr6	40330588	40330748	(130475231)	+	MER5A1	DNA/hAT-Charlie	2	162	(4)	3379293
442	31.4	5.3	7.4	chr6	40622871	40623100	(130182879)	+	MIRb	SINE/MIR	27	251	(17)	3379797
353	31.8	7.4	0.0	chr6	40623875	40624025	(130181954)	+	MIR3	SINE/MIR	30	192	(16)	3379798
272	29.4	0.9	6.8	chr6	40917977	40918093	(129887886)	+	X7C_LINE	LINE/CR1	116	225	(11)	3380301
230	38.2	12.0	3.0	chr6	40918178	40918479	(129887500)	+	L2b	LINE/L2	3023	3355	(20)	3380302
17	11.8	2.4	4.8	chr6	41645245	41645293	(129160686)	+	(CCCT)n	Simple_repeat	1	47	(0)	3381544
205	32.1	0.0	0.0	chr6	42096394	42096446	(128709533)	+	L2c	LINE/L2	3251	3303	(84)	3382525
15	0.0	0.0	0.0	chr6	42104972	42104990	(128700989)	+	(CTC)n	Simple_repeat	1	19	(0)	3382540
351	24.3	5.3	0.0	chr6	42136878	42136984	(128668995)	+	MER5A1	DNA/hAT-Charlie	46	158	(8)	3382616
19	14.0	0.0	2.4	chr6	42453070	42453110	(128352869)	+	G-rich	Low_complexity	1	41	(0)	3383279
14	14.9	5.4	0.0	chr6	42783122	42783158	(128022821)	+	(CGCTCC)n	Simple_repeat	1	39	(0)	3384026
13	16.4	8.6	3.2	chr6	42783234	42783291	(128022688)	+	(CCGCGG)n	Simple_repeat	1	63	(0)	3384027
29	0.0	0.0	0.0	chr6	42929620	42929646	(127876333)	+	(TGC)n	Simple_repeat	1	27	(0)	3384362
182	32.1	10.7	9.9	chr6	42929876	42930228	(127875751)	C	L2c	LINE/L2	(70)	3317	2962	3384363
1934	26.5	8.5	0.9	chr6	43229621	43229933	(127576046)	+	L2a	LINE/L2	2402	2748	(671)	3384957
3840	16.4	4.8	2.9	chr6	43229934	43230576	(127575403)	C	LTR62	LTR/ERVL	(0)	709	42	3384958
13	4.9	0.0	4.3	chr6	43667682	43667704	(127138275)	+	(CCT)n	Simple_repeat	1	23	(0)	3385799
1791	12.7	0.4	0.0	chr6	43708583	43708873	(127097106)	C	AluSx	SINE/Alu	(0)	312	25	3385871
232	24.1	4.6	0.0	chr6	43708973	43709039	(127096940)	+	L2b	LINE/L2	3315	3387	(0)	3385872
681	15.7	1.5	0.7	chr6	43709213	43709347	(127096632)	C	L1MB8	LINE/L1	(1)	6177	6042	3385873
15	24.6	0.0	5.2	chr6	43770925	43770982	(127034997)	+	(AGCCG)n	Simple_repeat	1	58	(0)	3385989
23	22.1	1.7	0.0	chr6	43770967	43771024	(127034955)	+	GA-rich	Low_complexity	1	59	(0)	3385990
16	14.8	0.0	4.9	chr6	44002458	44002498	(126803481)	+	(CCCCG)n	Simple_repeat	1	41	(0)	3386394
30	0.0	0.0	0.0	chr6	44002767	44002794	(126803185)	+	(GCG)n	Simple_repeat	1	28	(0)	3386395
439	32.7	14.4	1.4	chr6	44078810	44079020	(126726959)	+	MIRb	SINE/MIR	9	251	(17)	3386523
25	22.7	3.2	4.1	chr6	44139018	44139111	(126666868)	+	(CTC)n	Simple_repeat	1	97	(0)	3386634
15	27.8	1.8	1.8	chr6	44276369	44276423	(126529556)	+	(GAC)n	Simple_repeat	1	56	(0)	3386892
13	21.1	2.6	0.0	chr6	44313284	44313321	(126492658)	+	(GCCGCT)n	Simple_repeat	1	39	(0)	3386940
41	4.4	0.0	0.0	chr6	44712527	44712573	(126093406)	+	(AGCAGGGAGG)n	Simple_repeat	1	47	(0)	3387667
426	33.9	4.1	2.9	chr6	45934044	45934353	(124871626)	+	L4_A_Mam	LINE/RTE-X	4670	4983	(7)	3389412
12	12.2	3.7	0.0	chr6	52576573	52576599	(118229380)	+	(GGCAT)n	Simple_repeat	1	28	(0)	3398745
19	7.2	0.0	0.0	chr6	53544648	53544676	(117261303)	+	(CCT)n	Simple_repeat	1	29	(0)	3400325
1703	23.5	11.4	5.9	chr6	53580899	53581319	(117224660)	C	L1MEh	LINE/L1	(1362)	873	412	3400384
286	26.3	19.7	1.2	chr6	53581333	53581505	(117224474)	C	L1MEh	LINE/L1	(1901)	334	122	3400384
20	25.2	0.0	7.6	chr6	53794964	53794988	(117010991)	+	(GCG)n	Simple_repeat	1	52	(51)	3400740
13	22.8	1.5	7.6	chr6	53794989	53795053	(117010926)	+	(GCGG)n	Simple_repeat	1	66	(0)	3400741
20	25.2	0.0	7.6	chr6	53795054	53795075	(117010904)	+	(GCG)n	Simple_repeat	53	103	(0)	3400740
26	20.2	0.0	0.0	chr6	75284721	75284777	(95521202)	+	(CGCCGC)n	Simple_repeat	1	57	(0)	3425987
22	21.5	3.2	1.5	chr6	75284852	75284927	(95521052)	+	GA-rich	Low_complexity	1	77	(0)	3425988
24	13.5	0.0	0.0	chr6	89411922	89411962	(81394017)	+	(CTC)n	Simple_repeat	1	41	(0)	3444714
930	30.9	6.7	9.8	chr6	93857573	93858039	(76947940)	+	LTR16A	LTR/ERVL	1	451	(0)	3450611
32	27.8	3.2	2.2	chr6	98834564	98834680	(71971299)	+	GA-rich	Low_complexity	1	118	(0)	3456774
17	14.1	5.1	0.0	chr6	98834764	98834802	(71971177)	+	GA-rich	Low_complexity	1	41	(0)	3456775
13	17.0	4.3	8.2	chr6	99613614	99613683	(71192296)	+	G-rich	Low_complexity	1	73	(0)	3457940
20	12.4	0.0	0.0	chr6	99613689	99613723	(71192256)	+	(CAC)n	Simple_repeat	1	35	(0)	3457941
16	0.0	0.0	0.0	chr6	99613749	99613768	(71192211)	+	(CCG)n	Simple_repeat	1	20	(0)	3457942
21	22.2	0.0	1.9	chr6	99614278	99614331	(71191648)	+	(CGG)n	Simple_repeat	1	54	(0)	3457943
13	20.8	0.0	0.0	chr6	100881277	100881309	(69924670)	+	(CAGA)n	Simple_repeat	1	33	(0)	3459593
15	9.3	7.8	5.5	chr6	100881405	100881455	(69924524)	+	(CCTCCG)n	Simple_repeat	1	55	(0)	3459594
13	23.8	2.2	2.1	chr6	104859847	104859892	(65946087)	+	(CCG)n	Simple_repeat	1	47	(0)	3464541
14	19.9	3.5	5.1	chr6	106975331	106975391	(63830588)	+	G-rich	Low_complexity	1	60	(0)	3467862
323	10.0	3.2	1.6	chr6	108731863	108731923	(62074056)	C	L1MD2	LINE/L1	(10)	6349	6288	3471059
232	34.0	2.0	0.0	chr6	108732013	108732109	(62073870)	+	MIRb	SINE/MIR	32	130	(138)	3471060
15	13.7	0.0	0.0	chr6	108732485	108732508	(62073471)	+	(C)n	Simple_repeat	1	24	(0)	3471061
86	20.7	1.0	7.4	chr6	109483316	109483543	(61322436)	+	(GGCGG)n	Simple_repeat	1	212	(0)	3472231
16	31.6	4.7	0.0	chr6	114343041	114343047	(56462932)	+	(CTCCCG)n	Simple_repeat	1	25	(65)	3479982
19	21.9	4.6	1.5	chr6	114343048	114343112	(56462867)	+	(CTC)n	Simple_repeat	1	68	(0)	3479983
16	31.6	4.7	0.0	chr6	114343113	114343126	(56462853)	+	(CTCCCG)n	Simple_repeat	26	90	(0)	3479982
18	24.6	0.0	0.0	chr6	116100826	116100873	(54705106)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3482130
13	16.9	4.8	2.3	chr6	116681759	116681800	(54124179)	+	(CCTCCTC)n	Simple_repeat	1	44	(0)	3482936
12	28.0	0.0	0.0	chr6	119348985	119349023	(51456956)	+	(GCC)n	Simple_repeat	1	39	(0)	3486495
14	18.5	0.0	0.0	chr6	122996244	122996274	(47809705)	+	(CAG)n	Simple_repeat	1	31	(0)	3491135
319	34.8	8.3	1.9	chr6	125101035	125101192	(45704787)	+	MIR3	SINE/MIR	22	190	(18)	3493846
47	0.0	0.0	0.0	chr6	125101314	125101355	(45704624)	+	(CCT)n	Simple_repeat	1	42	(0)	3493847
1109	18.8	2.8	0.5	chr6	125101491	125101699	(45704280)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	254	3493848
57	41.1	0.0	1.4	chr6	125301977	125302258	(45503721)	+	(CCTCCC)n	Simple_repeat	1	282	(0)	3494128
481	6.2	0.0	0.0	chr6	125302382	125302445	(45503534)	+	MER72	LTR/ERV1	659	722	(0)	3494129
13	13.1	0.0	0.0	chr6	125790897	125790921	(45015058)	+	(CCT)n	Simple_repeat	1	25	(0)	3494827
32	30.2	2.1	2.7	chr6	127118719	127118862	(43687117)	+	(CCG)n	Simple_repeat	1	147	(0)	3496468
14	17.6	2.5	2.4	chr6	131950864	131950903	(38855076)	+	(GCCGCA)n	Simple_repeat	1	41	(0)	3503156
14	13.1	0.0	0.0	chr6	135182289	135182314	(35623665)	+	(GGA)n	Simple_repeat	1	26	(0)	3508089
14	20.6	0.0	6.0	chr6	136822798	136822847	(33983132)	+	(GAGGCG)n	Simple_repeat	1	50	(0)	3510538
24	16.1	7.0	1.3	chr6	138107346	138107416	(32698563)	+	(CGGAG)n	Simple_repeat	1	76	(0)	3512466
19	23.6	4.2	1.4	chr6	142945787	142945857	(27860122)	+	(CCGCCGG)n	Simple_repeat	1	74	(0)	3519177
32	12.6	0.0	0.0	chr6	142945960	142946012	(27859967)	+	(GAG)n	Simple_repeat	1	53	(0)	3519178
14	8.5	0.0	3.7	chr6	142946113	142946139	(27859840)	+	(GAGG)n	Simple_repeat	1	27	(0)	3519179
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
13	18.2	2.6	2.5	chr6	144285043	144285081	(26520898)	+	G-rich	Low_complexity	1	40	(0)	3521175
741	32.4	6.1	10.1	chr6	145634591	145635054	(25170925)	+	L2b	LINE/L2	2931	3374	(1)	3523006
92	16.1	0.6	0.0	chr6	148447608	148447770	(22358209)	+	(TCC)n	Simple_repeat	1	164	(0)	3526961
222	30.8	13.9	0.0	chr6	149429469	149429598	(21376381)	+	MIRb	SINE/MIR	98	248	(20)	3528416
425	27.3	7.8	1.2	chr6	149429755	149429921	(21376058)	+	L1ME3Cz	LINE/L1	819	997	(0)	3528417
14	5.0	0.0	0.0	chr6	149718040	149718060	(21087919)	+	(GCC)n	Simple_repeat	1	21	(0)	3529015
551	17.2	1.1	0.0	chr6	149985944	149986036	(20819943)	+	AluJr4	SINE/Alu	190	283	(29)	3529479
295	16.7	0.0	0.0	chr6	149986057	149986116	(20819863)	C	L1MB2	LINE/L1	(4)	6167	6108	3529480
15	18.4	0.0	7.8	chr6	150143197	150143247	(20662732)	+	(CGG)n	Simple_repeat	1	51	(0)	3529746
14	28.5	2.0	0.0	chr6	150143349	150143399	(20662580)	+	(GCA)n	Simple_repeat	1	52	(0)	3529747
102	16.9	2.9	0.5	chr6	150314263	150314469	(20491510)	+	GA-rich	Low_complexity	1	213	(0)	3530022
1652	14.7	4.1	1.8	chr6	156713381	156713666	(14092313)	C	AluJb	SINE/Alu	(7)	305	13	3539872
36	17.9	0.0	1.4	chr6	156713725	156713797	(14092182)	+	GA-rich	Low_complexity	1	73	(0)	3539873
45	14.1	0.0	1.2	chr6	156778169	156778248	(14027731)	+	(CCA)n	Simple_repeat	1	80	(0)	3539995
49	3.9	0.0	0.0	chr6	156778269	156778321	(14027658)	+	(CAG)n	Simple_repeat	1	53	(0)	3539996
16	14.9	0.0	0.0	chr6	156778732	156778761	(14027218)	+	(CCG)n	Simple_repeat	1	30	(0)	3539998
47	19.5	0.0	0.0	chr6	156778848	156778941	(14027038)	+	GA-rich	Low_complexity	1	94	(0)	3539999
35	8.0	0.0	1.8	chr6	156778946	156779000	(14026979)	+	(GGC)n	Simple_repeat	1	55	(0)	3540000
15	0.0	0.0	0.0	chr6	157144602	157144620	(13661359)	+	(GGA)n	Simple_repeat	1	19	(0)	3540488
16	27.8	1.6	1.6	chr6	157145031	157145092	(13660887)	+	(CTGTTC)n	Simple_repeat	1	63	(0)	3540489
31	17.2	2.5	3.7	chr6	157287646	157287725	(13518254)	+	(CCTC)n	Simple_repeat	1	82	(0)	3540678
20	3.8	0.0	0.0	chr6	157381083	157381109	(13424870)	+	(GAG)n	Simple_repeat	1	27	(0)	3540819
1404	24.6	11.4	3.0	chr6	157789805	157790269	(13015710)	C	MLT1J	LTR/ERVL-MaLR	(3)	509	1	3541477
19	17.9	0.0	4.2	chr6	157981785	157981832	(12824147)	+	GA-rich	Low_complexity	1	48	(0)	3541773
24	13.1	4.8	3.1	chr6	158536998	158537059	(12268920)	+	(GGACGG)n	Simple_repeat	1	65	(0)	3542687
330	25.0	15.9	0.0	chr6	159456190	159456305	(11349674)	+	MER5A1	DNA/hAT-Charlie	29	166	(0)	3544091
165	12.6	0.3	5.9	chr6	159898490	159898828	(10907151)	+	(CTC)n	Simple_repeat	1	340	(0)	3544797
254	36.1	4.4	5.5	chr6	162847133	162847407	(7958572)	+	L2b	LINE/L2	2957	3228	(147)	3548731
36	5.0	0.0	0.0	chr6	163414675	163414716	(7391263)	+	(GAG)n	Simple_repeat	1	42	(0)	3549419
13	14.7	3.3	0.0	chr6	163414729	163414758	(7391221)	+	(GCG)n	Simple_repeat	1	31	(0)	3549420
180	33.0	9.2	2.7	chr6	165858786	165858897	(4947082)	+	MER5A	DNA/hAT-Charlie	4	123	(66)	3552471
50	27.6	0.0	1.6	chr6	166008859	166008987	(4796992)	+	(GT)n	Simple_repeat	1	129	(0)	3552666
21	24.2	0.0	0.0	chr6	166486257	166486302	(4319677)	+	(CA)n	Simple_repeat	1	46	(0)	3553316
15	0.0	4.5	0.0	chr6	166749846	166749867	(4056112)	+	(CCT)n	Simple_repeat	1	23	(0)	3553595
15	22.5	1.8	3.6	chr6	166956925	166956979	(3849000)	+	(CACCCCG)n	Simple_repeat	1	56	(0)	3553813
180	28.4	2.6	3.9	chr6	167677201	167677277	(3128702)	+	OldhAT1	DNA/hAT-Ac	1338	1413	(1435)	3554648
104	16.3	0.5	0.0	chr6	168225877	168226060	(2579919)	+	(TCCTCC)n	Simple_repeat	1	185	(0)	3555281
15	10.0	0.0	0.0	chr6	168226207	168226228	(2579751)	+	(CA)n	Simple_repeat	1	22	(0)	3555282
233	22.8	12.9	1.0	chr6	168275449	168275550	(2530429)	C	MIR	SINE/MIR	(124)	138	23	3555327
1459	16.2	7.2	0.7	chr6	168563511	168563809	(2242170)	+	MLT1A0	LTR/ERVL-MaLR	1	320	(45)	3555593
403	22.6	7.3	0.0	chr6	169287617	169287718	(1518261)	C	MLT1D	LTR/ERVL-MaLR	(1)	504	395	3556312
41	12.9	3.9	0.0	chr6	170081137	170081213	(724766)	+	GA-rich	Low_complexity	1	80	(0)	3557125
12	24.6	1.7	5.1	chr6	170306579	170306584	(499395)	+	(GCCGGC)n	Simple_repeat	1	58	(0)	3557310
14	19.1	3.9	3.8	chr6	170306585	170306635	(499344)	+	(GCGTCC)n	Simple_repeat	1	53	(0)	3557311
13	28.8	0.0	0.0	chr6	170306744	170306824	(499155)	+	(GCGGAG)n	Simple_repeat	1	81	(0)	3557312
234	25.4	5.6	0.0	chr7	121276	121342	(159224631)	+	L1ME5	LINE/L1	5963	6033	(161)	3557980
23	33.5	4.7	4.9	chr7	121473	121705	(159224268)	+	GA-rich	Low_complexity	1	244	(0)	3557981
71	21.6	3.8	6.0	chr7	121706	121750	(159224223)	+	G-rich	Low_complexity	50	299	(0)	3557982
575	11.4	0.0	0.0	chr7	230952	231030	(159114943)	+	FRAM	SINE/Alu	21	99	(77)	3558087
14	4.5	4.3	0.0	chr7	231246	231268	(159114705)	+	(GCA)n	Simple_repeat	1	24	(0)	3558088
16	16.6	0.0	6.5	chr7	272063	272108	(159073865)	+	GA-rich	Low_complexity	1	46	(0)	3558125
193	29.9	6.5	8.9	chr7	272213	272370	(159073603)	+	L2a	LINE/L2	2375	2528	(891)	3558126
89	21.3	5.6	2.0	chr7	445887	446170	(158899803)	+	G-rich	Low_complexity	1	300	(0)	3558352
12	26.6	0.0	2.3	chr7	519254	519296	(158826677)	+	G-rich	Low_complexity	1	43	(0)	3558444
621	28.9	8.0	6.7	chr7	1075900	1076204	(158269769)	+	L1M4a2	LINE/L1	144	454	(2202)	3559239
257	22.7	5.8	0.8	chr7	1368764	1368876	(157977097)	C	MIRc	SINE/MIR	(118)	150	26	3559781
1822	15.8	0.0	5.1	chr7	1764140	1764278	(157581695)	+	AluJb	SINE/Alu	7	136	(176)	3560445
2465	7.7	0.0	0.0	chr7	1764279	1764576	(157581397)	+	AluSg	SINE/Alu	1	298	(12)	3560446
835	17.4	0.0	3.6	chr7	2276521	2276658	(157069315)	+	FLAM_C	SINE/Alu	1	133	(10)	3561024
996	19.9	9.1	6.3	chr7	2815483	2815814	(156530159)	+	MER74A	LTR/ERVL	189	530	(28)	3562048
15	13.1	2.0	8.0	chr7	4682138	4682186	(154663787)	+	G-rich	Low_complexity	1	50	(0)	3565384
206	19.9	9.0	1.8	chr7	5282127	5282893	(154063080)	+	GA-rich	Low_complexity	1	836	(0)	3566683
14	21.7	4.0	1.9	chr7	5283161	5283210	(154062763)	+	(CCCG)n	Simple_repeat	1	52	(0)	3566684
125	9.6	0.0	0.0	chr7	5312875	5313053	(154032920)	+	(GGAGGA)n	Simple_repeat	1	179	(0)	3566748
12	25.7	0.0	0.0	chr7	5313111	5313147	(154032826)	+	(CCCCGT)n	Simple_repeat	1	37	(0)	3566749
43	7.6	0.0	0.0	chr7	5313160	5313216	(154032757)	+	(GCT)n	Simple_repeat	1	57	(0)	3566750
194	13.2	2.6	0.0	chr7	5596365	5596402	(153749571)	+	MIRc	SINE/MIR	113	151	(117)	3567438
205	13.6	10.2	0.0	chr7	5596372	5596415	(153749558)	+	MIR1_Amn	SINE/MIR	123	171	(59)	3567439
286	35.7	6.0	0.5	chr7	5596717	5596882	(153749091)	C	L2c	LINE/L2	(232)	3155	2981	3567440
13	13.5	4.3	6.2	chr7	5634545	5634590	(153711383)	+	(GGCAG)n	Simple_repeat	1	48	(0)	3567506
13	9.4	8.3	2.6	chr7	6059100	6059135	(153286838)	+	(GCCCA)n	Simple_repeat	1	39	(0)	3568487
2010	10.3	2.4	3.1	chr7	6537262	6537370	(152808603)	+	AluSz	SINE/Alu	1	109	(203)	3569606
2109	10.7	0.0	0.4	chr7	6537371	6537676	(152808297)	C	AluSx3	SINE/Alu	(0)	311	2	3569607
13	24.3	5.7	0.0	chr7	7183194	7183246	(152162727)	+	(CCCGC)n	Simple_repeat	1	56	(0)	3570761
13	13.1	0.0	0.0	chr7	7567205	7567229	(151778744)	+	(GCCG)n	Simple_repeat	1	25	(0)	3571261
13	26.3	1.6	4.6	chr7	7968727	7968790	(151377183)	+	G-rich	Low_complexity	1	65	(0)	3571872
19	12.1	2.8	0.0	chr7	7968827	7968862	(151377111)	+	(GCG)n	Simple_repeat	1	37	(0)	3571873
309	30.2	10.4	6.4	chr7	7969024	7969225	(151376748)	C	L1M4b	LINE/L1	(6249)	618	408	3571874
13	4.1	0.0	9.7	chr7	8261747	8261777	(151084196)	+	(GGTG)n	Simple_repeat	1	31	(0)	3572278
12	16.0	0.0	3.3	chr7	8262052	8262081	(151083892)	+	(CCCGC)n	Simple_repeat	1	30	(0)	3572279
154	5.4	0.0	0.0	chr7	11198524	11198697	(148147276)	+	(CCTT)n	Simple_repeat	1	174	(0)	3575918
291	23.5	38.9	0.7	chr7	11198746	11199009	(148146964)	+	MLT1J1	LTR/ERVL-MaLR	72	442	(2)	3575919
808	26.2	4.1	5.7	chr7	11199027	11199451	(148146522)	C	L1MC5a	LINE/L1	(1871)	906	489	3575920
779	30.9	12.0	3.1	chr7	11437255	11437971	(147908002)	+	Tigger16a	DNA/TcMar-Tigger	159	948	(9)	3576197
60	3.2	0.0	1.5	chr7	12922126	12922192	(146423781)	+	(CTC)n	Simple_repeat	1	67	(0)	3578054
49	0.0	0.0	0.0	chr7	14903213	14903254	(144442719)	+	(GT)n	Simple_repeat	1	42	(0)	3580580
11	21.2	6.8	0.0	chr7	20784367	20784410	(138561563)	+	(CGCTGT)n	Simple_repeat	1	47	(0)	3588256
22	12.6	2.2	2.2	chr7	20784401	20784445	(138561528)	+	(GCC)n	Simple_repeat	1	46	(0)	3588257
13	13.0	5.6	2.6	chr7	20798416	20798451	(138547522)	+	(CTC)n	Simple_repeat	1	38	(0)	3588275
11	23.7	8.5	0.0	chr7	20798600	20798658	(138547315)	+	G-rich	Low_complexity	1	64	(0)	3588276
20	12.2	2.0	5.9	chr7	21543351	21543400	(137802573)	+	GA-rich	Low_complexity	1	51	(0)	3589425
15	19.3	0.0	4.4	chr7	23469603	23469647	(135876326)	+	G-rich	Low_complexity	1	45	(0)	3592399
15	16.6	2.3	4.4	chr7	23470377	23470420	(135875553)	+	GA-rich	Low_complexity	1	45	(0)	3592400
25	6.7	3.8	5.5	chr7	23470542	23470594	(135875379)	+	GA-rich	Low_complexity	1	55	(0)	3592401
31	10.1	2.9	4.2	chr7	24573277	24573297	(134772676)	+	(GCG)n	Simple_repeat	1	20	(0)	3594106
38	0.0	0.0	0.0	chr7	24573298	24573332	(134772641)	+	(GGA)n	Simple_repeat	1	35	(0)	3594107
31	10.1	2.9	4.2	chr7	24573333	24573380	(134772593)	+	(GCG)n	Simple_repeat	3	50	(0)	3594108
16	10.0	4.0	7.7	chr7	24573401	24573450	(134772523)	+	G-rich	Low_complexity	1	52	(0)	3594109
25	20.8	1.3	5.0	chr7	24573501	24573579	(134772394)	+	(CGG)n	Simple_repeat	1	80	(0)	3594110
457	20.0	10.2	2.6	chr7	26291508	26291661	(133054312)	C	L1ME2z	LINE/L1	(4)	6440	6274	3596788
16	4.0	0.0	6.7	chr7	26291981	26292010	(133053963)	+	(CGC)n	Simple_repeat	1	30	(0)	3596789
13	25.6	1.5	5.9	chr7	27098315	27098381	(132247592)	+	(CTCTC)n	Simple_repeat	1	68	(0)	3598016
1669	7.2	0.9	0.0	chr7	28298062	28298270	(131047703)	C	L1PA11	LINE/L1	(0)	6174	5964	3599853
15	11.5	7.9	0.0	chr7	28408943	28408980	(130936993)	+	(CCCCTA)n	Simple_repeat	1	41	(0)	3600023
616	16.7	2.2	2.9	chr7	30027844	30027979	(129317994)	C	MER5A1	DNA/hAT-Charlie	(19)	147	13	3602519
89	27.8	3.3	4.7	chr7	30694757	30695106	(128650867)	+	GA-rich	Low_complexity	1	345	(0)	3603490
21	22.0	0.0	4.7	chr7	31057163	31057226	(128288747)	+	(CTCC)n	Simple_repeat	1	64	(0)	3604085
229	30.8	2.5	0.0	chr7	31057367	31057444	(128288529)	+	MIRb	SINE/MIR	87	166	(102)	3604086
814	22.2	16.3	1.5	chr7	31115250	31115582	(128230391)	C	Arthur1B	DNA/hAT-Tip100	(0)	1225	834	3604170
13	21.9	0.0	2.6	chr7	35695017	35695055	(123650918)	+	G-rich	Low_complexity	1	39	(0)	3611056
20	30.8	3.2	1.0	chr7	35801370	35801462	(123544511)	+	(GGC)n	Simple_repeat	1	96	(0)	3611239
17	33.0	0.0	3.6	chr7	35801781	35801864	(123544109)	+	(GGC)n	Simple_repeat	1	84	(0)	3611240
18	29.2	1.5	1.4	chr7	36153375	36153442	(123192531)	+	(CGC)n	Simple_repeat	1	69	(0)	3611823
609	17.7	0.0	0.0	chr7	36209701	36209796	(123136177)	C	MSTB	LTR/ERVL-MaLR	(249)	177	82	3611912
505	16.5	0.0	1.2	chr7	36209839	36209924	(123136049)	C	MSTB	LTR/ERVL-MaLR	(341)	85	1	3611912
264	33.1	3.7	3.2	chr7	36210256	36210442	(123135531)	+	L1ME4a	LINE/L1	4492	4679	(1467)	3611913
387	26.9	0.0	0.0	chr7	37434571	37434663	(121911310)	+	L2a	LINE/L2	2789	2881	(538)	3613740
15	0.0	0.0	0.0	chr7	39949858	39949876	(119396097)	+	(GGC)n	Simple_repeat	1	19	(0)	3617484
27	13.8	5.1	4.8	chr7	42237522	42237600	(117108373)	+	(CTC)n	Simple_repeat	1	83	(0)	3620930
12	10.1	8.3	5.8	chr7	42911917	42911964	(116434009)	+	(GCACGCGA)n	Simple_repeat	1	52	(0)	3621833
1583	15.4	8.3	2.8	chr7	43071466	43071785	(116274188)	C	MER61A	LTR/ERV1	(2)	339	1	3622059
23452	8.3	2.8	1.9	chr7	43071786	43072461	(116273512)	C	MER61-int	LTR/ERV1	(0)	5217	4496	3622059
59	7.2	0.0	0.0	chr7	43248671	43248745	(116097228)	+	(CCT)n	Simple_repeat	1	75	(0)	3622340
11	24.0	2.6	0.0	chr7	44145166	44145204	(115200769)	+	(GGCCAC)n	Simple_repeat	1	40	(0)	3623873
47	29.3	1.4	4.5	chr7	44146127	44146346	(115199627)	+	(CCCCGC)n	Simple_repeat	1	223	(0)	3623874
606	22.9	3.1	3.7	chr7	45216070	45216232	(114129741)	C	MLT1A	LTR/ERVL-MaLR	(212)	162	1	3625665
273	27.3	13.8	0.0	chr7	45216597	45216739	(114129234)	+	LTR78	LTR/ERV1	1050	1215	(89)	3625666
18	24.7	3.7	3.6	chr7	45433231	45433325	(113912648)	+	GA-rich	Low_complexity	1	95	(0)	3625933
15	14.4	0.0	3.0	chr7	45433329	45433361	(113912612)	+	(CCT)n	Simple_repeat	1	33	(0)	3625934
240	26.3	12.1	3.5	chr7	47635018	47635190	(111710783)	C	MIRb	SINE/MIR	(76)	192	3	3628805
11	16.9	2.9	2.8	chr7	47635362	47635396	(111710577)	+	(CTGTCC)n	Simple_repeat	1	36	(0)	3628806
886	19.3	3.5	0.0	chr7	51318082	51318247	(108027726)	+	AluJo	SINE/Alu	2	173	(139)	3633476
30	17.0	2.0	7.0	chr7	55018905	55019002	(104326971)	+	(CTC)n	Simple_repeat	1	100	(0)	3638101
13	16.3	2.8	2.7	chr7	55365947	55365982	(103979991)	+	(CGG)n	Simple_repeat	1	37	(0)	3638526
36	2.9	0.0	0.0	chr7	64946753	64946787	(94399186)	+	(CA)n	Simple_repeat	1	35	(0)	3646992
30	0.0	0.0	0.0	chr7	66100213	66100240	(93245733)	+	(AGG)n	Simple_repeat	1	28	(0)	3649226
12	5.6	0.0	0.0	chr7	66100275	66100293	(93245680)	+	(AGG)n	Simple_repeat	1	19	(0)	3649226
20	5.3	10.0	0.0	chr7	66100325	66100364	(93245609)	+	GA-rich	Low_complexity	1	44	(0)	3649227
1294	17.3	7.4	3.2	chr7	66100374	66100656	(93245317)	+	AluSc8	SINE/Alu	2	297	(14)	3649228
15	17.6	7.5	1.8	chr7	70694296	70694348	(88651625)	+	(CGC)n	Simple_repeat	1	57	(0)	3658702
18	6.6	0.0	7.9	chr7	70694494	70694531	(88651442)	+	(CCT)n	Simple_repeat	1	38	(0)	3658703
2215	9.4	0.6	2.1	chr7	70870301	70870627	(88475346)	C	L1PA11	LINE/L1	(0)	6174	5853	3658981
2431	8.8	0.0	0.0	chr7	70870787	70871091	(88474882)	+	AluSx1	SINE/Alu	5	309	(3)	3658982
669	20.2	2.5	9.1	chr7	71733667	71733854	(87612119)	+	AluJb	SINE/Alu	2	187	(115)	3660827
14	25.8	2.1	0.0	chr7	72337022	72337068	(87008905)	+	(CCCGCT)n	Simple_repeat	1	48	(0)	3662110
27	25.7	0.0	1.5	chr7	72337407	72337474	(87008499)	+	(CA)n	Simple_repeat	1	68	(0)	3662111
12	25.5	0.0	0.0	chr7	73308615	73308651	(86037322)	+	(CCACC)n	Simple_repeat	1	37	(0)	3664324
306	24.6	19.8	0.8	chr7	73308961	73309091	(86036882)	C	L1M5	LINE/L1	(601)	5523	5362	3664325
14	19.1	8.7	2.7	chr7	73434512	73434580	(85911393)	+	(GGCCCGC)n	Simple_repeat	1	75	(0)	3664625
20	7.9	4.8	2.3	chr7	73647799	73647840	(85698133)	+	(GGGCGGC)n	Simple_repeat	1	44	(0)	3665148
324	28.4	5.7	2.5	chr7	73703523	73703641	(85642332)	+	MIR3	SINE/MIR	19	141	(67)	3665267
2196	10.7	0.7	0.0	chr7	73771115	73771413	(85574560)	+	AluJo	SINE/Alu	8	308	(4)	3665433
21	18.3	0.0	0.0	chr7	74174225	74174268	(85171705)	+	(GCGT)n	Simple_repeat	1	44	(0)	3666407
14	12.3	5.4	2.6	chr7	74174287	74174323	(85171650)	+	(GGC)n	Simple_repeat	1	39	(0)	3666408
26	6.3	0.0	0.0	chr7	74280079	74280112	(85065861)	+	(CTTT)n	Simple_repeat	1	34	(0)	3666663
1558	14.7	0.5	0.0	chr7	74280127	74280350	(85065623)	C	AluJr	SINE/Alu	(64)	248	24	3666664
2256	10.7	0.3	0.0	chr7	74280353	74280651	(85065322)	+	AluSx	SINE/Alu	2	301	(11)	3666665
202	35.3	5.9	4.8	chr7	74290917	74291084	(85054889)	C	L2c	LINE/L2	(221)	3166	2997	3666692
2263	11.5	0.0	3.4	chr7	74430604	74430924	(84915049)	+	AluSx1	SINE/Alu	1	310	(2)	3667074
20	17.8	0.0	7.6	chr7	74430973	74431038	(84914935)	+	(CCTCCTC)n	Simple_repeat	1	66	(0)	3667075
14	23.5	3.1	4.5	chr7	74658156	74658220	(84687753)	+	G-rich	Low_complexity	1	67	(0)	3667696
14	17.1	0.0	2.9	chr7	74658232	74658266	(84687707)	+	(CCCCCT)n	Simple_repeat	1	35	(0)	3667697
2042	15.9	0.0	0.7	chr7	74671700	74671994	(84673979)	+	AluJo	SINE/Alu	1	293	(19)	3667732
12	27.8	3.1	3.0	chr7	75073438	75073501	(84272472)	+	G-rich	Low_complexity	1	66	(0)	3668724
23	14.7	5.3	5.1	chr7	75073665	75073739	(84272234)	+	(GCCCCA)n	Simple_repeat	1	79	(0)	3668725
11	17.9	0.0	10.9	chr7	75990337	75990391	(83355582)	+	(CACTCT)n	Simple_repeat	1	55	(0)	3671062
14	8.7	0.0	3.7	chr7	76069405	76069431	(83276542)	+	(AGG)n	Simple_repeat	1	27	(0)	3671251
13	27.0	1.6	3.2	chr7	76201662	76201722	(83144251)	+	G-rich	Low_complexity	1	62	(0)	3671569
16	13.1	0.0	0.0	chr7	76225461	76225485	(83120488)	+	(C)n	Simple_repeat	1	25	(0)	3671634
789	12.6	0.8	2.4	chr7	76225614	76225740	(83120233)	+	AluJr	SINE/Alu	15	139	(173)	3671635
531	29.8	5.1	2.3	chr7	76225751	76225922	(83120051)	C	MIR	SINE/MIR	(14)	248	72	3671636
15	15.6	5.5	0.0	chr7	76248397	76248437	(83097536)	+	GA-rich	Low_complexity	1	43	(0)	3671698
12	25.3	3.8	1.8	chr7	76282879	76282931	(83063042)	+	(GCCGG)n	Simple_repeat	1	55	(0)	3671776
2379	8.3	0.0	1.0	chr7	76395694	76395994	(82949979)	C	AluSq2	SINE/Alu	(15)	298	1	3672043
15	13.9	0.0	0.0	chr7	76396118	76396141	(82949832)	+	(A)n	Simple_repeat	1	24	(0)	3672044
2597	19.1	3.1	1.3	chr7	76396162	76396638	(82949335)	+	MER66B	LTR/ERV1	1	486	(0)	3672045
13	25.0	2.0	2.0	chr7	76397687	76397735	(82948238)	+	(CCCGCAG)n	Simple_repeat	1	50	(0)	3672048
189	31.5	0.0	10.7	chr7	76404180	76404282	(82941691)	C	MIR3	SINE/MIR	(17)	191	100	3672065
1240	13.4	0.0	2.1	chr7	76404538	76404731	(82941242)	+	AluJr	SINE/Alu	29	218	(94)	3672066
13	22.1	4.1	2.0	chr7	77416390	77416438	(81929535)	+	(CCTCGC)n	Simple_repeat	1	51	(0)	3673725
15	16.3	0.0	2.8	chr7	77416499	77416534	(81929439)	+	(GCCGGA)n	Simple_repeat	1	36	(0)	3673726
14615	3.6	0.0	0.0	chr7	78922192	78924735	(80421238)	C	L1PA3	LINE/L1	(0)	6155	3611	3676104
37	4.9	0.0	0.0	chr7	78924834	78924876	(80421097)	+	(ATT)n	Simple_repeat	1	43	(0)	3676105
30	3.5	0.0	0.0	chr7	79453794	79453823	(79892150)	+	(GT)n	Simple_repeat	1	30	(0)	3676791
12	23.6	1.8	5.4	chr7	79453994	79454048	(79891925)	+	(GGAGCCG)n	Simple_repeat	1	56	(0)	3676792
17	31.1	0.0	0.0	chr7	80493919	80493977	(78851996)	+	(CTG)n	Simple_repeat	1	59	(0)	3678281
18	16.9	2.0	3.9	chr7	92833535	92833584	(66512389)	+	(GCC)n	Simple_repeat	1	51	(0)	3694479
22	19.3	2.0	2.0	chr7	94301504	94301553	(65044420)	+	(CA)n	Simple_repeat	1	51	(0)	3696422
44	0.0	0.0	0.0	chr7	94301662	94301699	(65044274)	+	(TG)n	Simple_repeat	1	38	(0)	3696423
42	21.7	5.5	0.7	chr7	94301700	94301827	(65044146)	+	GA-rich	Low_complexity	1	135	(0)	3696424
19	11.2	0.0	0.0	chr7	94304123	94304151	(65041822)	+	(AG)n	Simple_repeat	1	29	(0)	3696425
17	8.1	0.0	0.0	chr7	96322039	96322064	(63023909)	+	(CGG)n	Simple_repeat	1	26	(0)	3699180
14	8.5	0.0	3.7	chr7	98106950	98106976	(61238997)	+	(GGC)n	Simple_repeat	1	27	(0)	3701943
20	20.6	2.0	0.0	chr7	98107089	98107138	(61238835)	+	(CGGA)n	Simple_repeat	1	51	(0)	3701944
16	11.7	0.0	0.0	chr7	98107207	98107234	(61238739)	+	(GCT)n	Simple_repeat	1	28	(0)	3701945
81	31.2	2.1	5.0	chr7	98400244	98400714	(60945259)	+	G-rich	Low_complexity	1	481	(0)	3702486
24	15.4	1.5	6.1	chr7	99438954	99439018	(59906955)	+	(GGC)n	Simple_repeat	1	66	(0)	3704735
12	18.3	0.0	3.0	chr7	100603022	100603054	(58742919)	+	(CTCC)n	Simple_repeat	1	33	(0)	3706931
1093	13.3	1.2	2.9	chr7	100799677	100799849	(58546124)	+	AluJr	SINE/Alu	24	193	(119)	3707403
332	17.1	3.5	1.3	chr7	100799850	100799924	(58546049)	C	FRAM	SINE/Alu	(84)	82	4	3707404
1328	18.1	3.2	0.0	chr7	100851574	100851811	(58494162)	+	AluJb	SINE/Alu	64	309	(3)	3707518
296	34.7	6.2	0.4	chr7	100851817	100851949	(58494024)	+	MIRb	SINE/MIR	107	251	(17)	3707519
277	18.4	12.1	3.3	chr7	100851933	100852022	(58493951)	C	MIR	SINE/MIR	(38)	224	126	3707520
26	21.6	0.0	0.0	chr7	100890969	100891027	(58454946)	+	GA-rich	Low_complexity	1	59	(0)	3707583
15	22.8	7.5	2.3	chr7	100966449	100966481	(58379492)	+	(GGCGCT)n	Simple_repeat	1	52	(34)	3707725
16	11.6	0.0	0.0	chr7	100966482	100966509	(58379464)	+	(GCT)n	Simple_repeat	1	28	(0)	3707726
15	22.8	7.5	2.3	chr7	100966510	100966528	(58379445)	+	(GGCGCT)n	Simple_repeat	53	86	(0)	3707725
12	19.8	2.3	4.4	chr7	100966552	100966595	(58379378)	+	G-rich	Low_complexity	1	45	(0)	3707727
18	19.5	0.0	5.7	chr7	101163032	101163084	(58182889)	+	(CTC)n	Simple_repeat	1	53	(0)	3708138
16	17.9	5.8	1.8	chr7	101165508	101165559	(58180414)	+	(GGCTC)n	Simple_repeat	1	55	(0)	3708140
218	25.0	14.0	4.8	chr7	101252159	101252242	(58093731)	+	L2c	LINE/L2	3294	3386	(1)	3708330
922	19.6	3.6	0.6	chr7	101405340	101405502	(57940471)	C	AluJr	SINE/Alu	(16)	296	129	3708730
32	3.0	0.0	0.0	chr7	101739857	101739890	(57606083)	+	(GGA)n	Simple_repeat	1	34	(0)	3709551
2117	12.9	0.0	2.8	chr7	101740123	101740440	(57605533)	C	AluJr	SINE/Alu	(1)	311	3	3709552
36	2.7	0.0	0.0	chr7	101743688	101743725	(57602248)	+	(CCT)n	Simple_repeat	1	38	(0)	3709558
32	9.7	3.6	0.0	chr7	104328724	104328778	(55017195)	+	(GAG)n	Simple_repeat	1	57	(0)	3713984
29	3.2	0.0	0.0	chr7	104328789	104328820	(55017153)	+	(GCC)n	Simple_repeat	1	32	(0)	3713985
45	2.3	0.0	0.0	chr7	105014152	105014196	(54331777)	+	(GCC)n	Simple_repeat	1	45	(0)	3715005
22	11.3	0.0	0.0	chr7	105521796	105521833	(53824140)	+	(CGGGGAG)n	Simple_repeat	1	38	(0)	3716040
18	16.4	0.0	2.7	chr7	105521971	105522021	(53823952)	+	G-rich	Low_complexity	1	49	(0)	3716041
16	12.1	0.0	0.0	chr7	106031562	106031589	(53314384)	+	(GCT)n	Simple_repeat	1	28	(0)	3716990
32	3.0	0.0	0.0	chr7	106284719	106284752	(53061221)	+	(AGCCCC)n	Simple_repeat	1	34	(0)	3717379
312	27.9	9.8	7.3	chr7	106285214	106285391	(53060582)	C	L1M4b	LINE/L1	(6487)	380	198	3717380
323	26.7	9.5	9.7	chr7	111756805	111757194	(47588779)	C	L2b	LINE/L2	(74)	3301	2913	3724796
17	20.9	0.0	2.2	chr7	111874083	111874128	(47471845)	+	(TTCCTAC)n	Simple_repeat	1	46	(0)	3724968
14	7.3	13.0	1.9	chr7	111874190	111874235	(47471738)	+	(TCACTCC)n	Simple_repeat	1	52	(0)	3724969
302	23.7	8.7	12.0	chr7	121395853	121396068	(37949905)	+	L1M4b	LINE/L1	472	679	(6188)	3737604
16	30.9	1.4	1.4	chr7	121396138	121396206	(37949767)	+	(CCGC)n	Simple_repeat	1	70	(0)	3737605
3495	18.0	2.4	2.9	chr7	121938115	121938829	(37407144)	C	MER67C	LTR/ERV1	(0)	711	1	3738415
11	27.2	2.0	2.0	chr7	122304531	122304548	(37041425)	+	(CACCAC)n	Simple_repeat	1	28	(23)	3738935
16	0.0	0.0	0.0	chr7	122304549	122304568	(37041405)	+	(CCT)n	Simple_repeat	1	20	(0)	3738936
11	27.2	2.0	2.0	chr7	122304569	122304580	(37041393)	+	(CACCAC)n	Simple_repeat	29	51	(0)	3738935
32	5.4	0.0	0.0	chr7	123662847	123662885	(35683088)	+	(CCT)n	Simple_repeat	1	39	(0)	3740779
17	11.1	0.0	0.0	chr7	123662901	123662929	(35683044)	+	(CCT)n	Simple_repeat	1	29	(0)	3740779
21	16.1	0.0	5.6	chr7	123692782	123692835	(35653138)	+	GA-rich	Low_complexity	1	54	(0)	3740815
21	13.2	5.8	1.8	chr7	128192635	128192686	(31153287)	+	(CCT)n	Simple_repeat	1	55	(0)	3746771
13	27.4	1.9	1.8	chr7	128192804	128192857	(31153116)	+	(CCTCT)n	Simple_repeat	1	55	(0)	3746772
12	21.7	0.0	0.0	chr7	128791385	128791416	(30554557)	+	(CCCT)n	Simple_repeat	1	32	(0)	3747979
12	18.7	0.0	3.0	chr7	128886811	128886843	(30459130)	+	GA-rich	Low_complexity	1	33	(0)	3748100
677	27.3	11.0	0.3	chr7	129150501	129150729	(30195244)	+	MIRb	SINE/MIR	1	257	(11)	3748600
13	24.4	3.2	4.6	chr7	129150897	129150959	(30195014)	+	A-rich	Low_complexity	1	65	(0)	3748601
1639	19.3	2.6	0.3	chr7	129151119	129151419	(30194554)	C	AluJr	SINE/Alu	(4)	308	1	3748602
2294	10.0	1.3	1.0	chr7	129213577	129213886	(30132087)	C	AluSx1	SINE/Alu	(0)	312	2	3748731
18	14.0	0.0	0.0	chr7	129611701	129611732	(29734241)	+	(CGG)n	Simple_repeat	1	32	(0)	3749522
13	21.0	3.2	6.2	chr7	129611757	129611818	(29734155)	+	(AGGCGC)n	Simple_repeat	1	64	(0)	3749523
33	9.6	0.0	0.0	chr7	130273579	130273624	(29072349)	+	(AC)n	Simple_repeat	1	46	(0)	3750882
26	0.0	0.0	0.0	chr7	131556271	131556295	(27789678)	+	(GGCGAC)n	Simple_repeat	1	25	(0)	3753007
12	17.6	11.7	1.5	chr7	131556299	131556358	(27789615)	+	(GCA)n	Simple_repeat	1	67	(0)	3753008
24	24.7	1.5	0.0	chr7	131556574	131556640	(27789333)	+	(GCG)n	Simple_repeat	1	68	(0)	3753009
539	34.0	0.5	7.0	chr7	131626497	131626711	(27719262)	+	MIRb	SINE/MIR	34	234	(34)	3753171
4084	15.0	4.1	4.3	chr7	131755240	131755743	(27590230)	C	L1MC1	LINE/L1	(2457)	3689	3170	3753398
1862	15.6	2.3	1.0	chr7	131755836	131756246	(27589727)	C	SVA_F	Retroposon/SVA	(518)	857	421	3753405
1844	16.4	6.8	0.2	chr7	131756269	131756664	(27589309)	C	L1MC	LINE/L1	(2800)	3346	2923	3753406
1618	12.2	1.0	1.0	chr7	132561275	132564422	(26781551)	+	(CCT)n	Simple_repeat	1	3179	(0)	3754576
478	29.9	7.2	7.5	chr7	132564423	132564674	(26781299)	+	L2c	LINE/L2	3135	3385	(2)	3754575
26	25.8	1.3	1.3	chr7	135509714	135509790	(23836183)	+	GA-rich	Low_complexity	1	78	(0)	3759070
279	32.7	7.6	4.3	chr7	137674616	137674826	(21671147)	+	L2c	LINE/L2	2936	3158	(229)	3762239
216	29.8	8.5	4.2	chr7	137675154	137675321	(21670652)	C	L3	LINE/CR1	(34)	4065	3890	3762240
1906	21.1	13.4	4.4	chr7	141653695	141654602	(17691371)	C	Charlie2a	DNA/hAT-Charlie	(0)	2861	1860	3769627
294	23.9	15.6	2.6	chr7	141654619	141654773	(17691200)	C	Charlie2a	DNA/hAT-Charlie	(2558)	303	125	3769628
386	30.9	4.9	4.9	chr7	141976571	141976754	(17369219)	C	MIRb	SINE/MIR	(70)	198	15	3770046
13	25.8	6.1	1.4	chr7	143882595	143882660	(15463313)	+	(CCCCG)n	Simple_repeat	1	70	(0)	3772444
12	13.5	2.8	5.4	chr7	143882854	143882889	(15463084)	+	GA-rich	Low_complexity	1	37	(0)	3772445
33	11.4	1.3	6.5	chr7	146116098	146116173	(13229800)	+	GA-rich	Low_complexity	1	77	(0)	3775457
26	0.0	0.0	0.0	chr7	146116215	146116239	(13229734)	+	(GGC)n	Simple_repeat	1	25	(0)	3775458
2359	5.5	3.7	0.0	chr7	148884977	148885265	(10460708)	C	AluSp	SINE/Alu	(13)	300	1	3779541
12	21.6	5.6	5.3	chr7	149262051	149262121	(10083852)	+	(GCCGCGG)n	Simple_repeat	1	75	(0)	3780412
14	10.1	6.2	0.0	chr7	149262245	149262276	(10083697)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	3780413
12	20.0	0.0	0.0	chr7	149773212	149773240	(9572733)	+	(CTGA)n	Simple_repeat	1	29	(0)	3781159
16	14.5	2.5	2.4	chr7	149790401	149790440	(9555533)	+	(GCCCTGC)n	Simple_repeat	1	41	(0)	3781171
887	28.0	14.8	3.0	chr7	149854553	149855044	(9490929)	C	MLT1E2	LTR/ERVL-MaLR	(64)	563	2	3781245
14	22.9	9.0	1.2	chr7	151018766	151018843	(8327130)	+	(GCGCAG)n	Simple_repeat	1	85	(0)	3782791
13	20.3	6.7	0.0	chr7	151020442	151020486	(8325487)	+	(CTCTC)n	Simple_repeat	1	48	(0)	3782793
17	21.2	1.7	3.3	chr7	151122481	151122519	(8223454)	+	(CTGCCG)n	Simple_repeat	1	39	(0)	3782941
53	11.1	0.0	0.0	chr7	151122520	151122607	(8223366)	+	(CCT)n	Simple_repeat	1	88	(0)	3782942
17	16.4	0.0	4.3	chr7	151122608	151122626	(8223347)	+	(GCC)n	Simple_repeat	2	19	(0)	3782943
19	29.0	0.0	3.9	chr7	151251913	151251989	(8093984)	+	(GGCCC)n	Simple_repeat	1	77	(0)	3783106
12	20.4	8.6	1.6	chr7	151252224	151252281	(8093692)	+	GA-rich	Low_complexity	1	63	(0)	3783107
15	5.8	7.5	4.7	chr7	151440168	151440207	(7905766)	+	(GCCCT)n	Simple_repeat	1	43	(0)	3783433
197	22.4	6.5	1.7	chr7	151440780	151440838	(7905135)	+	L2b	LINE/L2	3308	3369	(6)	3783435
239	16.1	1.8	8.2	chr7	151441051	151441111	(7904862)	C	MIRc	SINE/MIR	(110)	158	102	3783436
309	28.5	13.9	3.1	chr7	151831918	151832185	(7513788)	+	MamGypLTR1a	LTR/Gypsy	364	688	(96)	3784097
1597	22.6	5.4	0.7	chr7	151894015	151894437	(7451536)	+	MLT1C	LTR/ERVL-MaLR	1	444	(23)	3784195
618	31.1	4.4	2.4	chr7	151994471	151994762	(7351211)	+	L2a	LINE/L2	2913	3211	(215)	3784387
2585	2.7	1.0	0.3	chr7	151994763	151995056	(7350917)	C	AluY	SINE/Alu	(15)	296	1	3784388
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
1034	9.5	0.7	8.3	chr7	152544238	152544405	(6801568)	C	AluSx3	SINE/Alu	(77)	234	80	3785409
11	16.9	2.9	2.8	chr7	155463352	155463386	(3882587)	+	(CCCTCA)n	Simple_repeat	1	36	(0)	3789665
64	17.3	0.0	5.8	chr7	155463369	155463524	(3882449)	+	(CTC)n	Simple_repeat	1	156	(0)	3789666
16	27.8	1.8	0.0	chr7	156640631	156640686	(2705287)	+	G-rich	Low_complexity	1	57	(0)	3791165
195	37.2	8.7	0.0	chr7	157614297	157614433	(1731540)	+	L3	LINE/CR1	2731	2880	(1219)	3792622
14	19.3	0.0	6.4	chr7	157760513	157760563	(1585410)	+	(TCCC)n	Simple_repeat	1	47	(0)	3792723
1535	2.0	0.0	1.9	chr7	157760729	157760933	(1585040)	C	L1PA2	LINE/L1	(1813)	4333	4133	3792724
304	28.8	3.5	2.8	chr7	158385526	158385668	(960305)	+	Charlie29a	DNA/hAT-Charlie	576	719	(0)	3793210
13	18.0	2.0	7.7	chr7	158385893	158385943	(960030)	+	(CCT)n	Simple_repeat	1	52	(0)	3793211
226	36.8	5.0	2.2	chr7	158386422	158386444	(959529)	C	MamRTE1	LINE/RTE-BovB	(3548)	264	125	3793212
238	34.5	3.5	2.6	chr7	158386445	158386557	(959416)	C	MamSINE1	SINE/tRNA-RTE	(80)	210	97	3793213
718	24.4	3.8	0.9	chr7	158830063	158830293	(515680)	C	MER65A	LTR/ERV1	(207)	238	1	3793758
825	20.2	0.5	5.5	chr7	158975450	158975648	(370325)	C	LOR1a	LTR/ERV1	(0)	497	309	3793976
1229	20.7	5.7	2.8	chr7	158975793	158975900	(370073)	+	L1MC1	LINE/L1	5992	6101	(232)	3793977
7628	12.1	5.6	2.4	chr7	158975901	158977135	(368838)	+	MER52C	LTR/ERV1	1	1276	(2)	3793978
15	20.4	0.0	2.4	chr7	159144586	159144626	(201347)	+	(CCCGCT)n	Simple_repeat	1	41	(0)	3794136
196	27.7	9.8	7.5	chr7	159197235	159197394	(148579)	+	L2b	LINE/L2	3028	3191	(184)	3794189
18	4.0	0.0	3.6	chr8	544659	544686	(144593950)	+	(GGC)n	Simple_repeat	1	28	(0)	3794932
14	11.5	0.0	3.3	chr8	544866	544895	(144593741)	+	(GGGCG)n	Simple_repeat	1	30	(0)	3794933
12049	17.4	1.6	5.4	chr8	889288	890202	(144248434)	C	L1PA8A	LINE/L1	(5520)	833	11	3795277
24	8.1	2.4	2.3	chr8	2064762	2064803	(143073833)	+	(CCT)n	Simple_repeat	1	43	(0)	3796391
21	22.2	0.0	6.5	chr8	6708508	6708584	(138430052)	+	G-rich	Low_complexity	1	77	(0)	3802488
12	17.4	8.9	0.0	chr8	6708877	6708921	(138429715)	+	(CCGGCGTC)n	Simple_repeat	1	49	(0)	3802489
423	23.9	18.6	0.0	chr8	6841566	6841745	(138296891)	+	L2a	LINE/L2	3184	3404	(22)	3802670
231	26.2	1.5	1.5	chr8	8317062	8317127	(136821509)	+	MIR3	SINE/MIR	16	81	(127)	3804515
330	22.2	2.9	6.6	chr8	8317172	8317277	(136821359)	+	LTR33	LTR/ERVL	47	148	(367)	3804516
28	27.3	4.8	1.5	chr8	8318772	8318897	(136819739)	+	(CGGCGG)n	Simple_repeat	1	132	(0)	3804519
2192	11.7	0.0	0.0	chr8	8845971	8846261	(136292375)	+	AluSz	SINE/Alu	1	291	(21)	3805439
64	17.2	0.0	0.0	chr8	8846263	8846377	(136292259)	+	GA-rich	Low_complexity	1	115	(0)	3805440
608	26.7	17.9	0.3	chr8	8846379	8846850	(136291786)	+	L2a	LINE/L2	2646	3208	(218)	3805438
1467	20.2	3.9	1.0	chr8	10990581	10990882	(134147754)	C	AluJb	SINE/Alu	(1)	311	1	3808891
1970	25.2	4.2	4.8	chr8	14211050	14211468	(130927168)	+	LTR41	LTR/ERVL	1	418	(350)	3813709
18	14.0	2.4	2.4	chr8	17413210	17413250	(127725386)	+	(CCT)n	Simple_repeat	1	42	(0)	3818144
16	18.2	2.1	4.2	chr8	18387208	18387279	(126751357)	+	(CCG)n	Simple_repeat	1	70	(0)	3819563
200	21.6	0.7	1.1	chr8	20373508	20373944	(124764692)	+	GA-rich	Low_complexity	1	440	(0)	3822749
160	16.1	5.0	1.3	chr8	21183161	21183521	(123955115)	+	(CCT)n	Simple_repeat	1	379	(0)	3824027
431	28.9	13.4	0.0	chr8	21183530	21183716	(123954920)	+	MIRb	SINE/MIR	17	232	(36)	3824028
49	17.4	4.1	1.6	chr8	21788807	21788927	(123349709)	+	(TCTC)n	Simple_repeat	1	126	(0)	3825006
21	16.9	0.0	6.6	chr8	21788998	21789026	(123349610)	+	G-rich	Low_complexity	1	44	(42)	3825007
14	15.3	2.6	2.6	chr8	21789027	21789064	(123349572)	+	(GGCGG)n	Simple_repeat	1	39	(0)	3825008
216	30.2	14.3	2.4	chr8	21901625	21901790	(123236846)	C	MamTip2	DNA/hAT-Tip100	(88)	217	29	3825254
354	37.6	1.5	1.5	chr8	21901822	21901956	(123236680)	C	L2b	LINE/L2	(0)	3375	3241	3825255
13	9.3	8.3	2.6	chr8	22024318	22024353	(123114283)	+	A-rich	Low_complexity	1	39	(0)	3825450
514	22.4	2.0	0.7	chr8	22024495	22024638	(123113998)	+	MER5A	DNA/hAT-Charlie	23	168	(21)	3825451
14	22.0	2.0	3.9	chr8	22367197	22367247	(122771389)	+	G-rich	Low_complexity	1	52	(0)	3826083
11	21.2	0.0	2.9	chr8	22552310	22552344	(122586292)	+	(CCCGCT)n	Simple_repeat	1	35	(0)	3826451
13	26.2	1.7	3.4	chr8	22589482	22589539	(122549097)	+	(CCTCCC)n	Simple_repeat	1	59	(0)	3826512
300	26.2	5.6	0.0	chr8	22785636	22785719	(122352917)	+	MIRc	SINE/MIR	67	155	(113)	3826792
544	32.8	5.3	0.5	chr8	22785890	22786088	(122352548)	+	MIRb	SINE/MIR	57	265	(3)	3826793
2152	11.6	0.7	0.3	chr8	23522898	23523182	(121615454)	C	AluSg	SINE/Alu	(23)	287	1	3828088
310	20.6	0.0	1.6	chr8	23523185	23523248	(121615388)	+	MLT1C	LTR/ERVL-MaLR	403	465	(2)	3828084
1138	13.9	0.6	0.0	chr8	23523599	23523764	(121614872)	+	AluSx1	SINE/Alu	145	311	(1)	3828089
19	28.1	1.5	0.0	chr8	23683118	23683182	(121455454)	+	(TCCCTC)n	Simple_repeat	1	66	(0)	3828343
398	24.5	2.8	7.3	chr8	24941826	24941975	(120196661)	C	MER5A1	DNA/hAT-Charlie	(7)	159	17	3830210
24	31.6	2.8	3.4	chr8	24942030	24942172	(120196464)	+	(CCCTACC)n	Simple_repeat	1	147	(0)	3830211
2676	4.6	0.0	0.0	chr8	24942855	24943159	(120195477)	C	AluY	SINE/Alu	(5)	306	2	3830212
3304	9.6	4.9	0.0	chr8	27278925	27279373	(117859263)	C	MER4A1	LTR/ERV1	(0)	472	1	3834103
287	30.8	12.2	1.9	chr8	27279723	27279884	(117858752)	C	L1ME4a	LINE/L1	(6310)	186	6	3834099
15	20.6	6.0	0.0	chr8	27490972	27491021	(117647615)	+	(CCTCTC)n	Simple_repeat	1	53	(0)	3834471
14	25.2	0.0	3.9	chr8	27491089	27491139	(117647497)	+	(GGCAG)n	Simple_repeat	1	51	(0)	3834472
66	17.8	6.0	4.8	chr8	28402203	28402437	(116736199)	+	GA-rich	Low_complexity	1	249	(0)	3836061
1962	21.3	7.8	4.8	chr8	28402907	28403149	(116735487)	+	L1ME1	LINE/L1	5604	5868	(311)	3836062
12	17.6	0.0	0.0	chr8	28890070	28890096	(116248540)	+	(CCTTT)n	Simple_repeat	1	27	(0)	3837024
16	28.6	1.7	0.0	chr8	28890493	28890551	(116248085)	+	(CCTCCC)n	Simple_repeat	1	60	(0)	3837025
24	15.8	6.7	2.5	chr8	30384444	30384518	(114754118)	+	G-rich	Low_complexity	1	80	(0)	3839683
31	3.1	0.0	0.0	chr8	30384617	30384649	(114753987)	+	(CTC)n	Simple_repeat	1	33	(0)	3839684
19196	13.2	1.6	1.7	chr8	32033258	32038429	(113100207)	C	L1PA10	LINE/L1	(783)	5150	10	3842331
28	6.0	0.0	0.0	chr8	32548858	32548892	(112589744)	+	(TCC)n	Simple_repeat	1	35	(0)	3843151
16	18.0	0.0	2.5	chr8	32548904	32548943	(112589693)	+	(CCTCCC)n	Simple_repeat	1	40	(0)	3843152
18	0.0	0.0	0.0	chr8	32750711	32750730	(112387906)	+	(A)n	Simple_repeat	1	20	(0)	3843436
30	0.0	0.0	0.0	chr8	37698416	37698443	(107440193)	+	(CGC)n	Simple_repeat	1	28	(0)	3850808
13	22.2	5.6	1.8	chr8	37698686	37698739	(107439897)	+	(CCTCACC)n	Simple_repeat	1	57	(0)	3850809
14	31.0	1.2	4.6	chr8	38468505	38468590	(106670046)	+	(GCCGCCC)n	Simple_repeat	1	87	(0)	3852337
34	16.1	3.9	1.2	chr8	41646257	41646334	(103492302)	+	(CCT)n	Simple_repeat	1	81	(0)	3857380
12	17.1	4.9	2.3	chr8	41895979	41896019	(103242617)	+	(CGCAGCC)n	Simple_repeat	1	43	(0)	3857794
1989	10.1	5.2	5.5	chr8	42171877	42172183	(102966453)	C	AluSx1	SINE/Alu	(6)	306	1	3858269
18	16.4	5.2	3.3	chr8	43056172	43056229	(102082407)	+	(CGCAGCC)n	Simple_repeat	1	61	(0)	3860029
13	18.5	7.0	0.0	chr8	43056407	43056449	(102082187)	+	(CAGCCC)n	Simple_repeat	1	46	(0)	3860030
17	15.3	2.7	0.0	chr8	48902059	48902067	(96236569)	+	(TATGTG)n	Simple_repeat	1	37	(0)	3863815
12	8.0	7.4	0.0	chr8	48902068	48902094	(96236542)	+	(TGTA)n	Simple_repeat	1	29	(0)	3863816
369	31.2	1.8	0.0	chr8	51370073	51370184	(93768452)	+	MIRb	SINE/MIR	86	199	(69)	3866704
14	25.6	0.0	7.2	chr8	55101909	55101977	(90036659)	+	(CCCCCG)n	Simple_repeat	1	69	(0)	3871975
224	29.9	2.8	1.3	chr8	55879220	55879306	(89259330)	C	MIRb	SINE/MIR	(87)	181	98	3873114
15	12.2	0.0	0.0	chr8	58659589	58659615	(86479021)	+	(GCT)n	Simple_repeat	1	27	(0)	3876891
1562	15.9	6.5	0.7	chr8	66505798	66506074	(78632562)	C	AluJr	SINE/Alu	(9)	303	10	3887502
27	23.1	0.0	0.0	chr8	69791015	69791077	(75347559)	+	GA-rich	Low_complexity	1	63	(0)	3892588
26	0.0	0.0	0.0	chr8	69832995	69833019	(75305617)	+	(CCG)n	Simple_repeat	1	25	(0)	3892657
35	0.0	0.0	0.0	chr8	70403848	70403879	(74734757)	+	(CCT)n	Simple_repeat	1	32	(0)	3893736
192	33.7	2.1	3.2	chr8	71481708	71481802	(73656834)	+	MamRTE1	LINE/RTE-BovB	3359	3452	(360)	3895259
29	13.9	1.7	1.7	chr8	71481816	71481873	(73656763)	+	GA-rich	Low_complexity	1	59	(0)	3895260
3476	20.4	4.6	1.8	chr8	71481977	71482973	(73655663)	+	L1ME3	LINE/L1	5074	6097	(65)	3895261
182	30.9	9.3	9.8	chr8	73356735	73356949	(71781687)	+	L2b	LINE/L2	3139	3352	(23)	3897849
752	17.8	0.0	0.0	chr8	73948479	73948596	(71190040)	+	AluSx3	SINE/Alu	191	308	(3)	3898860
342	17.3	1.5	0.0	chr8	73948643	73948706	(71189930)	+	FLAM_C	SINE/Alu	1	48	(85)	3898861
833	10.7	3.2	1.6	chr8	73948709	73948830	(71189806)	+	AluJr	SINE/Alu	157	280	(32)	3898862
52	0.0	0.0	0.0	chr8	73948836	73948882	(71189754)	+	(CAAG)n	Simple_repeat	1	47	(0)	3898863
27	29.3	0.0	5.7	chr8	74321412	74321535	(70817101)	+	(CGC)n	Simple_repeat	1	124	(0)	3899515
97	27.3	2.4	2.0	chr8	80838565	80838901	(64299735)	+	GA-rich	Low_complexity	1	345	(0)	3908436
35	29.0	0.0	0.9	chr8	88327496	88327602	(56811034)	+	(CGC)n	Simple_repeat	1	107	(0)	3918472
19	0.0	0.0	0.0	chr8	88327748	88327764	(56810872)	+	(GC)n	Simple_repeat	1	17	(0)	3918473
41	5.7	1.8	1.7	chr8	88327765	88327821	(56810815)	+	(CA)n	Simple_repeat	1	58	(0)	3918474
235	27.6	14.6	6.6	chr8	93994634	93994814	(51143822)	+	MIR	SINE/MIR	54	253	(9)	3926154
15	7.8	0.0	3.5	chr8	93995095	93995123	(51143513)	+	(TTATT)n	Simple_repeat	1	29	(0)	3926156
4011	2.4	0.0	0.0	chr8	93995124	93995582	(51143054)	C	L1PA4	LINE/L1	(1)	6154	5696	3926157
182	34.8	9.4	1.8	chr8	94187659	94187933	(50950703)	+	L2b	LINE/L2	2923	3220	(155)	3926430
103	16.1	1.6	0.0	chr8	94233394	94233580	(50905056)	+	(CA)n	Simple_repeat	1	190	(0)	3926507
2044	8.9	0.3	11.1	chr8	94233755	94234104	(50904532)	+	AluSx	SINE/Alu	1	312	(0)	3926508
22	26.5	3.2	3.1	chr8	96493672	96493766	(48644870)	+	GA-rich	Low_complexity	1	98	(0)	3930399
31	21.2	0.0	0.0	chr8	98947817	98947887	(46190749)	+	(CTCCTCT)n	Simple_repeat	1	71	(0)	3934483
14	29.1	0.0	3.5	chr8	100310098	100310155	(44828481)	+	(CCT)n	Simple_repeat	1	58	(0)	3936538
14	18.0	2.5	2.4	chr8	100952688	100952727	(44185909)	+	(GCGCGG)n	Simple_repeat	1	41	(0)	3937836
14	14.8	8.8	4.1	chr8	101501465	101501535	(43637101)	+	GA-rich	Low_complexity	1	74	(0)	3938874
12	12.0	3.7	0.0	chr8	102656127	102656153	(42482483)	+	(CCGCT)n	Simple_repeat	1	28	(0)	3940830
345	32.1	7.1	4.1	chr8	102807682	102807942	(42330694)	C	L2b	LINE/L2	(179)	3208	2927	3941147
36	5.2	0.0	0.0	chr8	103498695	103498734	(41639902)	+	(AC)n	Simple_repeat	1	40	(0)	3942423
14	9.7	5.7	2.7	chr8	104466965	104466999	(40671637)	+	G-rich	Low_complexity	1	37	(0)	3943763
19	14.7	0.0	6.4	chr8	104588904	104588957	(40549679)	+	GA-rich	Low_complexity	1	50	(0)	3943935
33	2.9	0.0	0.0	chr8	104588965	104588999	(40549637)	+	(CGC)n	Simple_repeat	1	35	(0)	3943936
13	18.9	6.0	1.9	chr8	104589053	104589102	(40549534)	+	(GCCGCCC)n	Simple_repeat	1	53	(0)	3943937
19	3.0	5.3	5.0	chr8	116938473	116938510	(28200126)	+	(GGC)n	Simple_repeat	1	40	(0)	3960865
47	0.0	0.0	0.0	chr8	118163875	118163917	(26974719)	+	(AAACA)n	Simple_repeat	1	43	(0)	3962815
34	22.0	0.0	1.2	chr8	118164059	118164139	(26974497)	+	GA-rich	Low_complexity	1	81	(0)	3962816
272	16.0	2.6	10.7	chr8	123160278	123160361	(21978275)	+	L1ME4b	LINE/L1	805	881	(11)	3971286
38	17.2	4.8	2.7	chr8	123160412	123160516	(21978120)	+	GA-rich	Low_complexity	1	110	(0)	3971287
997	25.2	4.3	5.2	chr8	123161531	123161734	(21976902)	C	Charlie2b	DNA/hAT-Charlie	(0)	2782	2591	3971288
14	26.0	1.7	3.3	chr8	125430092	125430171	(19708465)	+	(CCCCTCT)n	Simple_repeat	1	78	(0)	3975579
21	14.6	0.0	0.0	chr8	125430292	125430329	(19708307)	+	(AGG)n	Simple_repeat	1	38	(0)	3975580
12	17.6	0.0	0.0	chr8	126556375	126556401	(18582235)	+	GA-rich	Low_complexity	1	27	(0)	3977736
873	29.2	6.6	6.4	chr8	127847289	127847891	(17290745)	+	L1MC4a	LINE/L1	5466	5934	(1948)	3980238
584	15.5	0.0	0.0	chr8	127847905	127847988	(17290648)	C	AluJo	SINE/Alu	(13)	299	216	3980239
233	22.9	3.2	0.0	chr8	127847996	127848056	(17290580)	+	L1MC4a	LINE/L1	808	870	(22)	3980238
325	31.9	0.0	8.5	chr8	130377464	130377593	(14761043)	C	L2b	LINE/L2	(1)	3386	3256	3984877
233	27.6	1.0	10.9	chr8	130377630	130377739	(14760897)	+	LTR33	LTR/ERVL	75	173	(342)	3984878
295	23.3	18.2	3.0	chr8	130377789	130377987	(14760649)	+	LTR33	LTR/ERVL	280	515	(0)	3984878
20	18.8	5.8	5.4	chr8	132480947	132481033	(12657603)	+	(GCC)n	Simple_repeat	1	92	(0)	3988675
12	0.0	0.0	5.0	chr8	132481053	132481072	(12657564)	+	(CAG)n	Simple_repeat	1	20	(0)	3988676
38	0.0	0.0	0.0	chr8	132481542	132481576	(12657060)	+	(TCCCTCT)n	Simple_repeat	1	35	(0)	3988677
161	10.9	0.0	0.0	chr8	132673996	132674234	(12464402)	+	(AGGAGG)n	Simple_repeat	1	239	(0)	3989011
186	34.2	6.3	7.1	chr8	140262786	140263024	(4875612)	C	L2b	LINE/L2	(137)	3250	3014	4001640
199	29.5	4.9	1.3	chr8	140263044	140263122	(4875514)	+	L2b	LINE/L2	3272	3353	(22)	4001643
226	28.4	12.4	3.1	chr8	140263231	140263390	(4875246)	+	L2b	LINE/L2	3182	3358	(17)	4001644
521	31.2	11.2	0.0	chr8	140263575	140263773	(4874863)	C	MIRb	SINE/MIR	(7)	261	38	4001645
99	20.1	6.1	3.9	chr8	140457828	140458190	(4680446)	+	GA-rich	Low_complexity	1	385	(0)	4001984
213	23.5	0.0	3.8	chr8	140458276	140458328	(4680308)	+	L2b	LINE/L2	3099	3149	(226)	4001985
13	24.0	0.0	7.0	chr8	140634464	140634541	(4504095)	+	(GGTGCCA)n	Simple_repeat	1	72	(0)	4002305
203	28.3	0.0	0.0	chr8	141038854	141038906	(4099730)	C	L2c	LINE/L2	(61)	3326	3274	4003049
300	21.7	1.2	4.6	chr8	141038942	141039028	(4099608)	+	MLT1F	LTR/ERVL-MaLR	415	498	(50)	4003050
4299	17.7	1.7	1.8	chr8	141039030	141039679	(4098957)	C	L1MB3	LINE/L1	(10)	6173	5527	4003051
352	26.8	18.3	0.7	chr8	141058994	141059132	(4079504)	C	L2c	LINE/L2	(228)	3159	2991	4003096
297	26.0	0.0	0.0	chr8	141059426	141059502	(4079134)	+	MIRc	SINE/MIR	83	159	(109)	4003097
390	25.8	9.8	2.5	chr8	141598781	141599095	(3539541)	+	LTR33	LTR/ERVL	85	437	(83)	4003871
463	23.9	6.9	0.0	chr8	141682224	141682391	(3456245)	C	MLT1B	LTR/ERVL-MaLR	(0)	505	269	4003985
316	35.0	9.7	0.6	chr8	141682400	141682577	(3456059)	+	L2c	LINE/L2	3192	3387	(0)	4003986
30	11.2	6.9	2.6	chr8	141730342	141730413	(3408223)	+	(TCC)n	Simple_repeat	1	77	(0)	4004055
201	29.8	3.4	6.6	chr8	141730640	141730761	(3407875)	+	MIR3	SINE/MIR	62	179	(29)	4004056
248	26.5	4.8	3.9	chr8	141868580	141868681	(3269955)	C	L1ME3	LINE/L1	(221)	6114	6012	4004235
257	29.9	0.0	0.0	chr8	141868701	141868777	(3269859)	C	L1ME3Cz	LINE/L1	(8)	989	913	4004236
32	7.3	0.0	0.0	chr8	141868823	141868865	(3269771)	+	(CTC)n	Simple_repeat	1	43	(0)	4004237
543	29.6	8.4	1.4	chr8	141905514	141905722	(3232914)	C	MIR	SINE/MIR	(4)	258	34	4004288
194	22.9	2.0	0.0	chr8	142096056	142096103	(3042533)	C	MIRb	SINE/MIR	(37)	231	183	4004523
271	31.6	11.7	6.6	chr8	142409947	142410157	(2728479)	+	MIR	SINE/MIR	33	261	(7)	4004867
239	15.0	0.0	0.0	chr8	142471112	142471151	(2667485)	C	Charlie26a	DNA/hAT-Charlie	(4)	321	282	4004943
55	12.7	1.0	1.0	chr8	142510054	142510149	(2628487)	+	(AGG)n	Simple_repeat	1	97	(0)	4004988
33	13.0	3.5	14.1	chr8	142939668	142939893	(2198743)	+	(CCACCATC)n	Simple_repeat	1	234	(0)	4005476
15	14.2	0.0	3.0	chr8	143080230	143080262	(2058374)	+	(CCT)n	Simple_repeat	1	33	(0)	4005694
13	14.1	3.0	2.9	chr8	143220426	143220458	(1918178)	+	GA-rich	Low_complexity	1	34	(0)	4005925
592	23.6	13.2	8.9	chr8	143245688	143245933	(1892703)	+	MLT1E1	LTR/ERVL-MaLR	366	623	(31)	4005972
230	24.1	1.7	1.7	chr8	143267742	143267800	(1870836)	C	MIRb	SINE/MIR	(92)	176	118	4005996
12	27.2	2.0	2.0	chr8	143541484	143541533	(1597103)	+	(GCGGA)n	Simple_repeat	1	51	(0)	4006298
14	31.9	3.9	0.0	chr8	143733516	143733592	(1405044)	+	(GCCCC)n	Simple_repeat	1	80	(0)	4006585
15	7.8	0.0	3.5	chr8	143733637	143733665	(1404971)	+	(CGCCC)n	Simple_repeat	1	29	(0)	4006586
13	22.2	0.0	8.2	chr8	144049129	144049203	(1089433)	+	(CCCCGGC)n	Simple_repeat	1	68	(0)	4007029
12	16.4	2.1	8.2	chr8	144049273	144049320	(1089316)	+	(GGC)n	Simple_repeat	1	49	(0)	4007030
37	25.7	1.4	4.7	chr8	144354473	144354544	(784092)	+	(GCCCC)n	Simple_repeat	1	134	(14)	4007507
14	22.1	4.4	4.2	chr8	144354545	144354612	(784024)	+	(CCCGCCT)n	Simple_repeat	1	71	(0)	4007508
37	25.7	1.4	4.7	chr8	144354613	144354618	(784018)	+	(GCCCC)n	Simple_repeat	135	148	(0)	4007507
3136	13.4	1.5	7.8	chr8	144369497	144369696	(768940)	C	LTR27B	LTR/ERV1	(400)	194	1	4007526
1526	18.0	2.8	1.1	chr8	144369717	144369805	(768831)	+	AluJr	SINE/Alu	12	106	(206)	4007529
2557	6.8	0.3	0.0	chr8	144369806	144370115	(768521)	+	AluSp	SINE/Alu	1	311	(2)	4007530
2640	3.9	0.0	0.0	chr8	144428784	144429088	(709548)	C	AluY	SINE/Alu	(6)	305	1	4007614
25	31.3	1.7	2.5	chr8	144478236	144478354	(660282)	+	GA-rich	Low_complexity	1	121	(0)	4007652
25	17.5	1.6	1.6	chr8	144786661	144786711	(351925)	+	GA-rich	Low_complexity	11	61	(0)	4008106
2326	9.4	0.0	0.0	chr8	144798184	144798482	(340154)	+	AluSq2	SINE/Alu	1	299	(14)	4008118
821	10.5	19.3	0.7	chr8	145003627	145003769	(134867)	C	AluJb	SINE/Alu	(18)	294	119	4008415
1836	12.6	4.3	0.4	chr8	145003792	145004062	(134574)	C	AluJb	SINE/Alu	(30)	282	1	4008416
16	23.2	1.9	1.9	chr9	976573	976624	(137418093)	+	G-rich	Low_complexity	1	53	(0)	4010079
12	13.7	0.0	0.0	chr9	4662430	4662453	(133732264)	+	(AGC)n	Simple_repeat	1	24	(0)	4015436
1419	16.7	5.2	6.8	chr9	6484062	6484355	(131910362)	C	AluJr4	SINE/Alu	(3)	309	21	4018102
45	6.2	2.9	0.0	chr9	6484393	6484460	(131910257)	+	(CTCCTCC)n	Simple_repeat	1	70	(0)	4018103
1195	20.3	6.7	3.7	chr9	6484463	6484708	(131910009)	C	AluJb	SINE/Alu	(58)	254	1	4018104
267	24.3	10.0	0.5	chr9	6646152	6646265	(131748452)	+	MIRc	SINE/MIR	82	220	(42)	4018393
24	17.2	1.4	5.7	chr9	6646288	6646372	(131748345)	+	(TCCTCC)n	Simple_repeat	1	81	(0)	4018394
1922	13.8	2.0	0.0	chr9	6646386	6646676	(131748041)	+	AluJb	SINE/Alu	8	304	(8)	4018395
24	13.2	1.9	3.6	chr9	8857916	8857969	(129536748)	+	(CCT)n	Simple_repeat	1	55	(0)	4021667
11	22.9	1.7	6.8	chr9	8858018	8858075	(129536642)	+	(CTCCCG)n	Simple_repeat	1	59	(0)	4021668
34	5.3	0.0	0.0	chr9	8858086	8858125	(129536592)	+	(CTC)n	Simple_repeat	1	40	(0)	4021669
14	24.8	0.0	2.2	chr9	8858177	8858222	(129536495)	+	(CTTTCCT)n	Simple_repeat	1	46	(0)	4021670
18	22.2	2.1	0.0	chr9	10612728	10612774	(127781943)	+	GA-rich	Low_complexity	1	48	(0)	4024011
19	19.6	0.0	0.0	chr9	12775843	12775883	(125618834)	+	(GCG)n	Simple_repeat	1	41	(0)	4026707
15	28.1	0.0	0.0	chr9	12775864	12775907	(125618810)	+	(GCA)n	Simple_repeat	1	44	(0)	4026708
13	23.9	0.0	2.4	chr9	12775911	12775951	(125618766)	+	(CCT)n	Simple_repeat	1	41	(0)	4026709
16	22.0	0.0	6.7	chr9	15510372	15510431	(122884286)	+	G-rich	Low_complexity	1	60	(0)	4030657
407	23.7	35.4	6.5	chr9	16133529	16133872	(122260845)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	1	4031509
23	21.8	1.0	8.0	chr9	16727115	16727213	(121667504)	+	(GCGG)n	Simple_repeat	1	100	(0)	4032281
14	15.4	6.7	2.1	chr9	19230372	19230416	(119164301)	+	(CCTC)n	Simple_repeat	1	48	(0)	4035923
19	15.4	0.0	0.0	chr9	22447234	22447269	(115947448)	+	(GCC)n	Simple_repeat	1	36	(0)	4040557
25	25.5	4.2	4.0	chr9	25678153	25678272	(112716445)	+	(CGC)n	Simple_repeat	1	125	(0)	4044678
226	30.5	4.1	10.6	chr9	27353511	27353642	(111041075)	C	MIRc	SINE/MIR	(71)	197	75	4047007
1268	28.7	2.6	1.3	chr9	27476703	27477083	(110917634)	+	LTR16B2	LTR/ERVL	1	386	(76)	4047217
562	23.1	4.0	0.8	chr9	27477082	27477203	(110917514)	+	MER45A	DNA/hAT-Tip100	33	158	(20)	4047218
16	12.6	6.8	6.3	chr9	33817006	33817064	(104577653)	+	GA-rich	Low_complexity	1	63	(0)	4056030
14	6.0	11.4	0.0	chr9	34637661	34637695	(103757022)	+	(CGGCCCA)n	Simple_repeat	1	39	(0)	4057709
12	19.3	6.1	5.7	chr9	34637696	34637723	(103756994)	+	(GCACGGC)n	Simple_repeat	4	70	(0)	4057710
34	16.9	0.0	0.0	chr9	36400879	36400944	(101993773)	+	(GCCCC)n	Simple_repeat	1	66	(0)	4060561
15	20.0	6.0	5.7	chr9	36572773	36572855	(101821862)	+	(GTCCGC)n	Simple_repeat	1	88	(0)	4061005
19	17.5	2.7	7.8	chr9	37027606	37027680	(101367037)	+	(GCC)n	Simple_repeat	1	77	(0)	4061903
1439	9.4	21.6	1.7	chr9	37591925	37592157	(100802560)	C	AluSx1	SINE/Alu	(19)	293	2	4062991
17	9.1	2.6	5.0	chr9	37785063	37785101	(100609616)	+	(CCGCTT)n	Simple_repeat	1	40	(0)	4063381
739	17.5	2.2	14.1	chr9	69120531	69120647	(69274070)	C	L1MB3	LINE/L1	(76)	6107	5993	4081040
19	20.6	0.0	0.0	chr9	69174299	69174343	(69220374)	+	(AGCAGG)n	Simple_repeat	1	45	(0)	4081172
263	24.8	8.6	5.1	chr9	69971969	69972125	(68422592)	+	Charlie13b	DNA/hAT-Charlie	29	191	(321)	4082401
12	25.8	0.0	0.0	chr9	71446731	71446767	(66947950)	+	(CCGGCT)n	Simple_repeat	1	37	(0)	4084666
12	29.1	4.0	2.6	chr9	71446942	71447015	(66947702)	+	(GCCTCC)n	Simple_repeat	1	77	(0)	4084667
29	5.8	0.0	0.0	chr9	71768574	71768609	(66626108)	+	(CCT)n	Simple_repeat	1	36	(0)	4085192
16	13.2	4.4	4.3	chr9	72364921	72364965	(66029752)	+	GA-rich	Low_complexity	1	47	(0)	4086363
18	11.0	4.9	2.3	chr9	72365284	72365324	(66029393)	+	(CGG)n	Simple_repeat	1	43	(0)	4086364
17	16.4	0.0	0.0	chr9	75028093	75028126	(63366591)	+	(GCC)n	Simple_repeat	1	34	(0)	4090399
14	18.8	4.3	6.9	chr9	75088334	75088402	(63306315)	+	(CGCTC)n	Simple_repeat	1	72	(0)	4090519
12	15.8	0.0	3.3	chr9	75890707	75890736	(62503981)	+	(GAGC)n	Simple_repeat	1	30	(0)	4091628
1748	16.2	1.8	2.4	chr9	76683982	76684309	(61710408)	C	L1MA7	LINE/L1	(29)	6262	5937	4093004
23	18.4	3.1	3.0	chr9	78031965	78032029	(60362688)	+	GA-rich	Low_complexity	1	67	(0)	4095148
24	21.3	2.5	3.6	chr9	78032030	78032043	(60362674)	+	G-rich	Low_complexity	3	83	(0)	4095149
12	27.6	2.3	0.0	chr9	83062526	83062569	(55332148)	+	(CGT)n	Simple_repeat	1	45	(0)	4102320
553	23.5	12.8	0.0	chr9	84493389	84493571	(53901146)	C	MER102c	DNA/hAT-Charlie	(53)	278	69	4104810
331	36.9	2.0	2.5	chr9	85424915	85425081	(52969636)	C	MER5A	DNA/hAT-Charlie	(4)	185	8	4106192
14	15.3	0.0	0.0	chr9	85941551	85941579	(52453138)	+	G-rich	Low_complexity	1	29	(0)	4107038
67	26.0	4.0	5.6	chr9	86062381	86062726	(52331991)	+	GA-rich	Low_complexity	1	360	(0)	4107238
17	33.9	0.0	2.5	chr9	88534237	88534317	(49860400)	+	GA-rich	Low_complexity	1	81	(0)	4111361
27	19.2	10.4	0.8	chr9	90642901	90643015	(47751702)	+	(CGCCCTG)n	Simple_repeat	1	127	(0)	4114122
579	25.8	9.5	2.6	chr9	91102186	91102380	(47292337)	C	LTR16C	LTR/ERVL	(0)	489	280	4114700
958	26.6	8.4	2.3	chr9	91714775	91715209	(46679508)	C	Charlie4a	DNA/hAT-Charlie	(3)	505	42	4115646
111	20.4	3.3	1.1	chr9	93033278	93033548	(45361169)	+	(CCT)n	Simple_repeat	1	280	(0)	4117580
282	27.5	3.8	3.8	chr9	94825002	94825107	(43569610)	C	UCON4	Unknown	(196)	107	2	4120337
14	6.5	5.6	5.3	chr9	94825108	94825143	(43569574)	+	G-rich	Low_complexity	1	38	(0)	4120338
17	15.6	0.0	0.0	chr9	94921070	94921098	(43473619)	+	A-rich	Low_complexity	1	29	(0)	4120499
131	16.6	3.0	0.7	chr9	95571829	95572095	(42822622)	+	GA-rich	Low_complexity	1	275	(0)	4121402
1975	13.4	1.1	0.0	chr9	95572097	95572373	(42822344)	C	AluSz	SINE/Alu	(32)	280	1	4121403
1530	8.1	4.3	0.0	chr9	95779821	95780018	(42614699)	C	AluSp	SINE/Alu	(28)	285	79	4121735
13	10.0	0.0	0.0	chr9	95780117	95780138	(42614579)	+	(TAA)n	Simple_repeat	1	22	(0)	4121736
452	24.4	17.9	3.9	chr9	95876251	95876455	(42518262)	+	MIR	SINE/MIR	17	256	(6)	4121894
539	18.1	14.4	5.3	chr9	97222768	97222936	(41171781)	+	L1MA9	LINE/L1	6126	6312	(0)	4124163
308	28.4	11.8	9.7	chr9	97696884	97697140	(40697577)	C	L1M4b	LINE/L1	(6203)	664	402	4124935
325	33.3	2.6	2.4	chr9	98192889	98193096	(40201621)	+	MIR	SINE/MIR	40	246	(22)	4126037
289	25.7	17.5	0.9	chr9	99829195	99829308	(38565409)	+	Charlie4z	DNA/hAT-Charlie	27	163	(4)	4129137
25	26.0	3.5	3.4	chr9	104868964	104869083	(33525634)	+	G-rich	Low_complexity	1	120	(0)	4136380
20	24.4	2.6	3.8	chr9	105656220	105656297	(32738420)	+	(GGC)n	Simple_repeat	1	80	(0)	4137861
17	10.0	0.0	5.6	chr9	105694838	105694873	(32699844)	+	G-rich	Low_complexity	1	36	(0)	4137932
12	25.1	4.3	0.0	chr9	105695159	105695205	(32699512)	+	(CTCG)n	Simple_repeat	1	49	(0)	4137933
3137	18.5	3.8	15.2	chr9	105712971	105714397	(32680320)	+	MER52D	LTR/ERV1	56	1537	(586)	4137970
29	24.3	5.2	3.5	chr9	106860928	106861063	(31533654)	+	(CTCCTTT)n	Simple_repeat	1	143	(0)	4139690
52	23.1	0.8	0.0	chr9	106862510	106862631	(31532086)	+	(CTC)n	Simple_repeat	1	123	(0)	4139692
63	19.1	0.7	2.7	chr9	106863510	106863655	(31531062)	+	GA-rich	Low_complexity	1	147	(0)	4139695
14	13.6	2.9	2.9	chr9	106863655	106863688	(31531029)	+	(GCT)n	Simple_repeat	1	35	(0)	4139696
15	9.3	5.6	2.6	chr9	106863733	106863768	(31530949)	+	GA-rich	Low_complexity	1	38	(0)	4139697
32	3.0	0.0	0.0	chr9	109321009	109321042	(29073675)	+	(GCC)n	Simple_repeat	1	34	(0)	4144250
238	20.0	0.0	18.5	chr9	109321319	109321410	(29073307)	+	MIR3	SINE/MIR	124	198	(10)	4144251
12	28.1	6.2	0.0	chr9	109779952	109780015	(28614702)	+	(GCGC)n	Simple_repeat	1	68	(0)	4145117
2394	7.3	0.0	0.0	chr9	111598506	111598794	(26795923)	C	AluSx1	SINE/Alu	(23)	289	1	4148184
1017	17.0	7.7	2.5	chr9	111598796	111599030	(26795687)	C	L1MA7	LINE/L1	(121)	6170	5923	4148185
24	18.9	4.4	1.4	chr9	112750624	112750691	(25644026)	+	(CCTC)n	Simple_repeat	1	71	(0)	4150443
35	10.1	0.0	0.0	chr9	113565383	113565435	(24829282)	+	(GGA)n	Simple_repeat	1	53	(0)	4151919
188	18.0	3.7	3.0	chr9	113686982	113687464	(24707253)	+	GA-rich	Low_complexity	1	501	(0)	4152181
351	22.6	3.1	0.0	chr9	114370693	114370785	(24023932)	+	MER103C	DNA/hAT-Charlie	85	180	(117)	4153522
15	9.4	5.6	2.6	chr9	114504708	114504743	(23889974)	+	(GCCCCC)n	Simple_repeat	1	38	(0)	4153793
851	12.0	0.8	0.8	chr9	114610940	114611064	(23783653)	+	AluJr	SINE/Alu	1	125	(187)	4154051
16	26.2	1.3	5.3	chr9	114611397	114611471	(23783246)	+	G-rich	Low_complexity	1	76	(0)	4154052
361	29.9	8.8	9.6	chr9	114612712	114612951	(23781766)	+	L2b	LINE/L2	3133	3370	(5)	4154055
41	7.8	1.4	2.8	chr9	120413804	120413874	(17980843)	+	(GAGGGAG)n	Simple_repeat	1	72	(0)	4164975
381	30.9	13.6	1.0	chr9	120414145	120414350	(17980367)	C	MIRb	SINE/MIR	(25)	243	8	4164976
204	33.3	16.4	3.1	chr9	121286416	121286709	(17108008)	+	L2b	LINE/L2	2970	3310	(65)	4166674
472	26.2	17.8	0.5	chr9	121286786	121286956	(17107761)	+	MIRb	SINE/MIR	30	220	(48)	4166675
1303	14.3	0.5	4.2	chr9	121612120	121612335	(16782382)	+	AluJb	SINE/Alu	84	291	(21)	4167370
21	9.8	3.0	0.0	chr9	121612729	121612761	(16781956)	+	(GT)n	Simple_repeat	1	34	(0)	4167371
234	36.3	0.0	0.0	chr9	122219662	122219752	(16174965)	C	MIRb	SINE/MIR	(90)	178	88	4168580
37	22.7	0.0	0.0	chr9	122228971	122229053	(16165664)	+	(CCT)n	Simple_repeat	1	83	(0)	4168590
20	30.4	0.0	2.9	chr9	122229146	122229214	(16165503)	+	(AC)n	Simple_repeat	1	69	(0)	4168591
36	4.6	0.0	2.1	chr9	122905288	122905334	(15489383)	+	(CCT)n	Simple_repeat	1	47	(0)	4169756
253	35.2	3.0	2.5	chr9	123954460	123954557	(14440160)	+	MIRb	SINE/MIR	66	166	(102)	4171582
901	17.5	5.8	1.7	chr9	123954558	123954737	(14439980)	C	MER5A	DNA/hAT-Charlie	(0)	189	2	4171583
253	35.2	3.0	2.5	chr9	123954738	123954801	(14439916)	+	MIRb	SINE/MIR	167	229	(39)	4171582
184	22.8	11.2	3.7	chr9	123954848	123954929	(14439788)	C	L2b	LINE/L2	(183)	3192	3104	4171580
41	6.1	0.0	0.0	chr9	124011714	124011764	(14382953)	+	(CTC)n	Simple_repeat	1	51	(0)	4171700
183	31.4	13.0	1.4	chr9	124022456	124022597	(14372120)	C	MIR	SINE/MIR	(66)	196	36	4171719
12	4.7	4.5	0.0	chr9	124022707	124022728	(14371989)	+	(AAAC)n	Simple_repeat	1	23	(0)	4171720
484	36.0	4.3	3.8	chr9	124110555	124110664	(14284053)	C	MIRb	SINE/MIR	(14)	254	145	4171951
2731	9.6	0.3	1.4	chr9	124110665	124111032	(14283685)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4171952
220	29.5	7.8	2.0	chr9	124477476	124477584	(13917133)	C	MIRb	SINE/MIR	(93)	175	60	4172656
395	28.6	6.5	11.8	chr9	126370682	126371118	(12023599)	C	L1ME3C	LINE/L1	(861)	5285	4866	4176330
429	30.0	12.2	5.6	chr9	126720174	126720436	(11674281)	C	L2c	LINE/L2	(5)	3382	3091	4176897
2123	11.9	0.0	6.1	chr9	126720437	126720764	(11673953)	+	AluSg7	SINE/Alu	2	309	(0)	4176898
12	22.8	3.2	6.2	chr9	126914557	126914619	(11480098)	+	G-rich	Low_complexity	1	65	(0)	4177308
19	23.6	0.0	8.1	chr9	126914809	126914895	(11479822)	+	(CGGCC)n	Simple_repeat	1	87	(0)	4177309
1250	29.3	17.7	1.7	chr9	127369136	127369971	(11024746)	C	L2	LINE/L2	(791)	2628	1630	4178070
14	30.1	3.3	3.2	chr9	127612184	127612273	(10782444)	+	(CCCCGC)n	Simple_repeat	1	93	(0)	4178642
83	14.1	3.7	3.5	chr9	127720792	127720982	(10673735)	+	(CCCTCCT)n	Simple_repeat	1	198	(0)	4178864
69	16.4	8.8	1.4	chr9	127720983	127720995	(10673722)	+	(CCTT)n	Simple_repeat	1	222	(0)	4178865
202	34.7	6.9	0.0	chr9	127770405	127770499	(10624218)	C	MIR3	SINE/MIR	(25)	183	82	4178977
292	29.9	8.7	5.8	chr9	128127246	128127401	(10267316)	C	MIRc	SINE/MIR	(82)	186	26	4179816
13	8.5	0.0	14.0	chr9	128552779	128552828	(9841889)	+	(GGCGG)n	Simple_repeat	1	50	(0)	4180818
196	29.7	10.3	1.5	chr9	128684299	128684493	(9710224)	+	L2	LINE/L2	2561	2774	(645)	4181090
29	17.8	0.0	0.0	chr9	128787274	128787330	(9607387)	+	(GGC)n	Simple_repeat	1	57	(0)	4181331
11	7.5	6.7	3.1	chr9	129402059	129402088	(8992629)	+	(CTGAGC)n	Simple_repeat	1	32	(0)	4182734
63	12.6	6.6	3.4	chr9	129402088	129402257	(8992460)	+	(CTCCTCC)n	Simple_repeat	1	175	(0)	4182735
22	19.5	1.6	3.2	chr9	129402484	129402545	(8992172)	+	(CCTCCT)n	Simple_repeat	1	63	(0)	4182736
347	26.1	10.4	2.1	chr9	129550777	129550917	(8843800)	+	Charlie4z	DNA/hAT-Charlie	8	161	(6)	4183105
18	15.6	2.2	2.2	chr9	129557321	129557365	(8837352)	+	(CCTTCCT)n	Simple_repeat	1	46	(0)	4183124
261	27.3	10.0	1.4	chr9	129568536	129568690	(8826027)	C	MIRb	SINE/MIR	(42)	188	20	4183149
210	15.6	4.2	0.0	chr9	129569593	129569637	(8825080)	+	MIRc	SINE/MIR	103	149	(119)	4183153
520	28.0	9.2	3.7	chr9	129569735	129569949	(8824768)	C	L2a	LINE/L2	(16)	3410	3183	4183154
239	27.5	5.0	5.8	chr9	129596968	129597200	(8797517)	C	L2b	LINE/L2	(198)	3189	2943	4183214
20	12.3	7.0	3.3	chr9	129777606	129777662	(8617055)	+	(TCC)n	Simple_repeat	1	61	(0)	4183609
59	18.8	0.6	5.1	chr9	130138405	130138560	(8256157)	+	(CCCTCC)n	Simple_repeat	1	157	(0)	4184390
46	21.8	4.4	4.8	chr9	130138561	130138583	(8256134)	+	(TCCTCT)n	Simple_repeat	2	188	(0)	4184391
20	21.3	4.9	3.5	chr9	130681524	130681604	(7713113)	+	(GCGCAC)n	Simple_repeat	1	85	(0)	4185574
39	0.0	0.0	0.0	chr9	130681606	130681641	(7713076)	+	(CGC)n	Simple_repeat	1	36	(0)	4185575
53	15.9	8.3	0.0	chr9	130835649	130835781	(7558936)	+	(TC)n	Simple_repeat	1	144	(0)	4185898
15	19.4	1.7	6.6	chr9	130938818	130938877	(7455840)	+	(CCGCCGC)n	Simple_repeat	1	61	(0)	4186046
20	19.1	0.0	7.2	chr9	130938855	130938927	(7455790)	+	(TCCCTCC)n	Simple_repeat	1	67	(0)	4186047
43	12.4	7.3	0.0	chr9	131096389	131096484	(7298233)	+	G-rich	Low_complexity	1	103	(0)	4186388
14	24.0	4.5	2.9	chr9	131096693	131096759	(7297958)	+	G-rich	Low_complexity	1	70	(0)	4186389
12	24.4	0.0	4.3	chr9	131096868	131096914	(7297803)	+	(GCGCCGC)n	Simple_repeat	1	47	(0)	4186390
202	27.0	7.5	6.7	chr9	131266165	131266283	(7128434)	+	L2	LINE/L2	2742	2861	(558)	4186702
42	12.0	3.5	2.3	chr9	131266465	131266549	(7128168)	+	(TCC)n	Simple_repeat	1	88	(0)	4186703
13	17.2	6.9	4.8	chr9	132185654	132185711	(6209006)	+	(CTTCT)n	Simple_repeat	1	62	(0)	4188390
56	13.2	0.0	0.0	chr9	132185823	132185913	(6208804)	+	(GGA)n	Simple_repeat	1	91	(0)	4188391
196	31.4	0.0	0.0	chr9	132186153	132186203	(6208514)	+	L3	LINE/CR1	3938	3988	(111)	4188392
18	27.5	0.0	0.0	chr9	132582025	132582072	(5812645)	+	GA-rich	Low_complexity	1	48	(0)	4189187
2094	11.4	1.0	2.6	chr9	132812229	132812534	(5582183)	C	AluSx1	SINE/Alu	(7)	305	5	4189541
1595	21.9	9.1	2.3	chr9	133144780	133145210	(5249507)	+	MLT1C	LTR/ERVL-MaLR	1	463	(4)	4190129
14	26.3	4.9	3.5	chr9	133375819	133375900	(5018817)	+	G-rich	Low_complexity	1	86	(0)	4190475
20	8.8	7.7	3.6	chr9	133375984	133376035	(5018682)	+	(GCTC)n	Simple_repeat	1	56	(0)	4190476
209	20.3	1.2	1.9	chr9	133490702	133491182	(4903535)	+	GA-rich	Low_complexity	1	487	(0)	4190670
215	30.6	4.0	1.4	chr9	133491278	133491350	(4903367)	+	MIRb	SINE/MIR	91	165	(103)	4190668
14	9.6	0.0	0.0	chr9	133529895	133529917	(4864800)	+	(AGG)n	Simple_repeat	1	23	(0)	4190729
17	18.9	4.2	0.0	chr9	133534752	133534799	(4859918)	+	G-rich	Low_complexity	1	50	(0)	4190735
432	28.1	12.6	1.5	chr9	133609631	133609826	(4784891)	+	MIRb	SINE/MIR	49	268	(0)	4190835
15	21.0	4.4	0.0	chr9	133635246	133635290	(4759427)	+	GA-rich	Low_complexity	1	47	(0)	4190879
57	17.9	0.0	7.9	chr9	133666451	133666615	(4728102)	+	(TCC)n	Simple_repeat	1	165	(0)	4190922
232	19.4	12.7	4.6	chr9	133742677	133742741	(4651976)	+	MER102b	DNA/hAT-Charlie	114	184	(157)	4191033
13	16.3	2.8	2.7	chr9	133883584	133883619	(4511098)	+	(CAGG)n	Simple_repeat	1	37	(0)	4191204
217	24.5	5.4	0.0	chr9	133883690	133883742	(4510975)	C	L3	LINE/CR1	(107)	3992	3937	4191205
2047	10.9	0.7	5.8	chr9	133883854	133884164	(4510553)	+	AluSc	SINE/Alu	1	295	(14)	4191206
240	22.2	0.0	0.0	chr9	133956066	133956121	(4438596)	+	MIRc	SINE/MIR	82	137	(93)	4191315
200	29.2	9.6	3.4	chr9	133994244	133994360	(4400357)	+	MIRb	SINE/MIR	123	247	(21)	4191374
159	26.4	0.5	1.1	chr9	134024899	134025331	(4369386)	+	(CTC)n	Simple_repeat	1	435	(0)	4191431
36	0.0	0.0	0.0	chr9	135253871	135253903	(3140814)	+	(ACCGCC)n	Simple_repeat	1	33	(0)	4192957
260	32.2	2.0	5.7	chr9	135802850	135803060	(2591657)	+	L1M5	LINE/L1	5272	5474	(768)	4193644
509	22.6	7.6	0.0	chr9	135803411	135803543	(2591174)	+	MER104	DNA/TcMar-Tc2	36	179	(2)	4193645
354	9.4	0.0	1.5	chr9	135972326	135972390	(2422327)	C	L1MB3	LINE/L1	(7)	6176	6113	4193867
57	1.7	1.6	1.6	chr9	136051877	136051939	(2342778)	+	(AGG)n	Simple_repeat	1	64	(0)	4193971
266	36.5	0.0	2.0	chr9	136186826	136186923	(2207794)	C	MIRb	SINE/MIR	(65)	203	108	4194133
268	31.0	5.8	0.9	chr9	136587578	136587691	(1807026)	+	MIRb	SINE/MIR	106	225	(43)	4194524
16	16.5	0.0	0.0	chr9	136587972	136587998	(1806719)	+	G-rich	Low_complexity	1	27	(0)	4194525
924	15.8	3.2	5.6	chr9	136694098	136694292	(1700425)	+	MER53	DNA/hAT	2	191	(2)	4194662
17	8.0	0.0	0.0	chr9	136694393	136694419	(1700298)	+	(GGGGT)n	Simple_repeat	1	27	(0)	4194663
12	22.1	0.0	0.0	chr9	136808477	136808508	(1586209)	+	(GGCCA)n	Simple_repeat	1	32	(0)	4194831
17	22.3	6.0	3.4	chr9	136866032	136866114	(1528603)	+	(CCAGCCC)n	Simple_repeat	1	88	(0)	4194887
14	14.2	0.0	3.0	chr9	136866127	136866159	(1528558)	+	(CCCGG)n	Simple_repeat	1	33	(0)	4194888
26	24.0	1.3	1.3	chr9	137046064	137046138	(1348579)	+	GA-rich	Low_complexity	1	76	(0)	4195148
14	22.7	5.2	1.6	chr9	137199589	137199646	(1195071)	+	G-rich	Low_complexity	1	61	(0)	4195337
17	7.9	0.0	0.0	chr9	137240447	137240473	(1154244)	+	(CCCCT)n	Simple_repeat	1	27	(0)	4195376
13	18.1	0.0	7.0	chr9	137240474	137240483	(1154234)	+	(GCCCC)n	Simple_repeat	14	43	(0)	4195375
37	0.0	4.9	0.0	chrX	275088	275128	(155765767)	+	(AGGGAGG)n	Simple_repeat	1	43	(0)	4358314
14	13.4	9.2	5.6	chrX	275187	275251	(155765644)	+	GA-rich	Low_complexity	1	71	(0)	4358315
13	19.5	2.9	0.0	chrX	635464	635498	(155405397)	+	(TCTCC)n	Simple_repeat	1	36	(0)	4359040
106	17.7	0.9	1.8	chrX	785150	785366	(155255529)	+	(TCTT)n	Simple_repeat	1	219	(0)	4359375
407	20.9	2.5	2.7	chrX	1354417	1355485	(154685410)	+	GA-rich	Low_complexity	1	1096	(0)	4360823
19	24.8	1.8	0.0	chrX	2928748	2928804	(153112091)	+	G-rich	Low_complexity	1	58	(0)	4363866
24	14.5	2.5	8.4	chrX	9766021	9766101	(146274794)	+	GA-rich	Low_complexity	1	83	(0)	4375306
17	25.9	4.3	4.1	chrX	10014884	10014977	(146025918)	+	GA-rich	Low_complexity	1	98	(0)	4375803
56	3.5	0.0	0.0	chrX	11427806	11427864	(144613031)	+	(GGA)n	Simple_repeat	1	59	(0)	4377997
20	30.5	2.3	1.1	chrX	12791390	12791475	(143249420)	+	(GCC)n	Simple_repeat	1	88	(0)	4380115
12	20.8	8.0	0.0	chrX	25013153	25013202	(131027693)	+	(GCAGCG)n	Simple_repeat	1	54	(0)	4400465
30	31.1	0.0	0.0	chrX	25013231	25013325	(131027570)	+	(TCC)n	Simple_repeat	1	95	(0)	4400466
11	7.5	6.7	3.1	chrX	37685777	37685806	(118355089)	+	(CCAGGT)n	Simple_repeat	1	32	(0)	4417771
15	28.4	0.0	4.6	chrX	37685891	37685955	(118354940)	+	(GCC)n	Simple_repeat	1	65	(0)	4417772
36	18.8	6.0	1.7	chrX	41276457	41276554	(114764341)	+	GA-rich	Low_complexity	1	102	(0)	4424008
13	21.0	8.1	1.5	chrX	46912197	46912258	(109128637)	+	G-rich	Low_complexity	1	67	(0)	4433039
17	11.3	5.0	2.4	chrX	46912446	46912485	(109128410)	+	(CCG)n	Simple_repeat	1	42	(0)	4433040
23	21.6	0.0	0.0	chrX	47380735	47380782	(108660113)	+	(T)n	Simple_repeat	1	48	(0)	4434016
15	19.6	2.0	3.9	chrX	49043230	49043279	(106997616)	+	(GCCCG)n	Simple_repeat	1	51	(0)	4437371
18	15.3	0.0	2.6	chrX	49043454	49043492	(106997403)	+	(CCT)n	Simple_repeat	1	39	(0)	4437372
18	8.3	4.8	4.5	chrX	49270064	49270105	(106770790)	+	(GGC)n	Simple_repeat	1	44	(0)	4437811
18	32.0	1.4	0.0	chrX	49270086	49270158	(106770737)	+	GA-rich	Low_complexity	1	74	(0)	4437812
13	3.7	10.7	0.0	chrX	49270485	49270512	(106770383)	+	(GCAGGA)n	Simple_repeat	1	31	(0)	4437813
48	5.6	0.0	0.0	chrX	50813137	50813193	(105227702)	+	(GGC)n	Simple_repeat	1	57	(0)	4439878
13	17.5	3.1	0.0	chrX	50813194	50813225	(105227670)	+	(AGC)n	Simple_repeat	1	33	(0)	4439879
15	20.1	0.0	0.0	chrX	51408300	51408333	(104632562)	+	(CTC)n	Simple_repeat	1	34	(0)	4440596
15	18.4	1.5	9.0	chrX	53048279	53048344	(102992551)	+	(CCAG)n	Simple_repeat	1	67	(0)	4442938
21	15.9	0.0	0.0	chrX	53048354	53048400	(102992495)	+	(C)n	Simple_repeat	1	47	(0)	4442939
25	14.8	7.2	1.4	chrX	53048429	53048497	(102992398)	+	(CTCC)n	Simple_repeat	1	74	(0)	4442940
15	19.1	0.0	2.6	chrX	53049875	53049912	(102990983)	+	(CTC)n	Simple_repeat	1	38	(0)	4442944
48	0.0	0.0	0.0	chrX	53049936	53049976	(102990919)	+	(GT)n	Simple_repeat	1	41	(0)	4442945
23	20.9	0.0	0.0	chrX	53050044	53050094	(102990801)	+	(TCCT)n	Simple_repeat	1	51	(0)	4442946
305	37.9	7.3	1.3	chrX	53281744	53281973	(102758922)	C	MIRb	SINE/MIR	(23)	245	1	4443385
1067	22.9	4.1	0.4	chrX	54494513	54494749	(101546146)	+	MIRb	SINE/MIR	9	254	(14)	4445930
18	4.7	0.0	0.0	chrX	54530146	54530167	(101510728)	+	(C)n	Simple_repeat	1	22	(0)	4446015
12	18.7	4.3	4.2	chrX	70423322	70423367	(85617528)	+	(CGGAG)n	Simple_repeat	1	48	(0)	4459655
32	4.0	5.6	1.8	chrX	71910774	71910827	(84130068)	+	(AGG)n	Simple_repeat	1	57	(0)	4462355
29	22.7	0.0	0.0	chrX	72069385	72069452	(83971443)	+	GA-rich	Low_complexity	1	68	(0)	4462640
44	11.8	1.4	0.0	chrX	72069578	72069650	(83971245)	+	(GGA)n	Simple_repeat	1	74	(0)	4462641
28	20.7	4.3	3.1	chrX	74421368	74421461	(81619434)	+	GA-rich	Low_complexity	1	98	(0)	4465610
26	18.1	1.5	3.0	chrX	74421525	74421590	(81619305)	+	(GCA)n	Simple_repeat	1	67	(0)	4465611
46	32.8	0.6	0.6	chrX	74421702	74421873	(81619022)	+	(AGCCGG)n	Simple_repeat	1	173	(0)	4465612
12	13.6	6.8	4.3	chrX	74924493	74924536	(81116359)	+	(CCATGC)n	Simple_repeat	1	47	(0)	4466272
32	31.3	0.8	1.6	chrX	74925326	74925447	(81115448)	+	(GCT)n	Simple_repeat	1	123	(0)	4466275
38	7.7	0.0	1.8	chrX	74925484	74925540	(81115355)	+	(CCT)n	Simple_repeat	1	57	(0)	4466276
14	16.5	2.9	0.0	chrX	74925751	74925784	(81115111)	+	(CTCTCC)n	Simple_repeat	1	35	(0)	4466277
12	20.2	2.9	0.0	chrX	103687836	103687869	(52353026)	+	(CCTC)n	Simple_repeat	1	35	(0)	4498993
32	6.4	4.0	0.0	chrX	107449894	107449943	(48590952)	+	(CCG)n	Simple_repeat	1	52	(0)	4504182
13	22.4	7.0	2.6	chrX	107450101	107450171	(48590724)	+	G-rich	Low_complexity	1	76	(0)	4504183
17	17.6	0.0	5.9	chrX	107741826	107741876	(48299019)	+	GA-rich	Low_complexity	1	51	(0)	4504741
64	1.7	0.0	0.0	chrX	107742261	107742319	(48298576)	+	(GA)n	Simple_repeat	1	59	(0)	4504742
28	19.5	1.6	0.0	chrX	107742346	107742406	(48298489)	+	G-rich	Low_complexity	1	62	(0)	4504743
349	33.4	4.3	6.5	chrX	110413000	110413614	(45627281)	+	L2c	LINE/L2	201	801	(2618)	4508382
31	24.0	6.9	1.4	chrX	110944428	110944558	(45096337)	+	(CCT)n	Simple_repeat	1	140	(0)	4509099
13	8.5	4.0	0.0	chrX	118495453	118495477	(37545418)	+	(CCCCA)n	Simple_repeat	1	26	(0)	4519348
31	0.0	3.1	0.0	chrX	119758501	119758532	(36282363)	+	(CCT)n	Simple_repeat	1	33	(0)	4521757
14	9.3	0.0	0.0	chrX	130120918	130120940	(25919955)	+	(AGG)n	Simple_repeat	1	23	(0)	4535994
18	39.0	2.0	1.0	chrX	130171896	130171996	(25868899)	+	(CG)n	Simple_repeat	1	103	(0)	4536089
18	16.8	0.0	0.0	chrX	130268800	130268834	(25772061)	+	GA-rich	Low_complexity	1	35	(0)	4536265
71	27.0	4.4	4.9	chrX	134796358	134796747	(21244148)	+	GA-rich	Low_complexity	1	407	(0)	4543385
13	17.2	4.9	2.3	chrX	140091570	140091610	(15949285)	+	(CGCG)n	Simple_repeat	1	43	(0)	4551700
43	28.4	1.7	3.4	chrX	140091612	140091784	(15949111)	+	GA-rich	Low_complexity	1	176	(0)	4551701
14	14.2	3.2	0.0	chrX	150898644	150898674	(5142221)	+	GA-rich	Low_complexity	1	32	(0)	4566674
15	4.7	4.5	0.0	chrX	150898705	150898726	(5142169)	+	(GC)n	Simple_repeat	1	23	(0)	4566675
11	26.1	0.0	4.3	chrX	153687554	153687599	(2353296)	+	G-rich	Low_complexity	1	46	(0)	4570607
16	31.1	1.2	3.5	chrX	153687786	153687869	(2353026)	+	(GGCG)n	Simple_repeat	1	85	(0)	4570608
203	28.0	2.6	5.1	chrX	155767767	155767845	(273050)	C	OldhAT1	DNA/hAT-Ac	(919)	1929	1853	4573726