265	19.8	8.8	0.8	chr1	923333	923423	(248032999)	+	MIR	SINE/MIR	49	147	(121)	1177
13	21.7	0.0	2.6	chr1	923702	923740	(248032682)	+	(AGCCC)n	Simple_repeat	1	39	(0)	1178
13	5.2	0.0	0.0	chr1	923911	923930	(248032492)	+	(GGC)n	Simple_repeat	1	20	(0)	1179
15	10.0	2.8	5.4	chr1	1058985	1059020	(247897402)	+	GA-rich	Low_complexity	1	37	(0)	1320
12	23.6	0.0	6.0	chr1	1059381	1059430	(247896992)	+	(GCCCC)n	Simple_repeat	1	50	(0)	1321
12	22.5	4.3	5.6	chr1	1302363	1302431	(247653991)	+	(CCTGGAG)n	Simple_repeat	1	72	(0)	1569
11	10.6	0.0	10.5	chr1	1302400	1302437	(247653985)	+	G-rich	Low_complexity	1	38	(0)	1570
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
15	19.8	7.5	2.8	chr1	1407559	1407625	(247548797)	+	G-rich	Low_complexity	1	72	(0)	1698
314	21.0	1.3	2.6	chr1	2132844	2132930	(246823492)	C	MLT1B	LTR/ERVL-MaLR	(15)	375	265	2912
292	19.2	9.9	0.0	chr1	2132924	2132996	(246823426)	C	MLT1B	LTR/ERVL-MaLR	(289)	85	5	2912
190	23.3	4.4	0.0	chr1	2237407	2237449	(246718973)	C	L2	LINE/L2	(2918)	501	457	3042
203	10.5	2.6	5.0	chr1	2400367	2400406	(246556016)	+	MIR1_Amn	SINE/MIR	114	152	(78)	3192
130	13.9	1.3	1.3	chr1	2401197	2401429	(246554993)	+	(CCTCCCT)n	Simple_repeat	1	236	(0)	3193
308	25.2	4.9	1.5	chr1	3037920	3038056	(245918366)	+	LTR37A	LTR/ERV1	284	425	(1)	3681
14	26.1	2.9	4.2	chr1	3269902	3269970	(245686452)	+	GA-rich	Low_complexity	1	71	(0)	3872
359	31.2	5.9	0.7	chr1	3612886	3613030	(245343392)	C	MIR	SINE/MIR	(108)	154	2	4152
14	15.2	0.0	7.1	chr1	3728090	3728131	(245228291)	+	(CCTG)n	Simple_repeat	1	42	(0)	4275
11	24.8	6.1	2.9	chr1	3763633	3763698	(245192724)	+	(TGCCCC)n	Simple_repeat	1	70	(0)	4321
32	0.0	0.0	0.0	chr1	5509816	5509845	(243446577)	+	(GGAGGAG)n	Simple_repeat	1	30	(0)	6851
41	7.5	0.0	0.0	chr1	5750546	5750601	(243205821)	+	(TCTG)n	Simple_repeat	1	56	(0)	7211
14	23.8	2.0	1.9	chr1	5993052	5993102	(242963320)	+	(CCCTGCC)n	Simple_repeat	1	52	(0)	7535
22	14.3	0.0	4.0	chr1	6260844	6260893	(242695529)	+	(GGCTCC)n	Simple_repeat	1	50	(0)	7921
473	30.7	3.1	0.0	chr1	6468702	6468890	(242487532)	C	MER117	DNA/hAT-Charlie	(0)	197	3	8277
44	5.9	0.0	0.0	chr1	6469123	6469175	(242487247)	+	(TCC)n	Simple_repeat	1	53	(0)	8278
521	31.8	8.7	4.8	chr1	7629354	7629669	(241326753)	C	X7A_LINE	LINE/CR1	(34)	233	12	10091
82	30.3	1.2	3.9	chr1	7941888	7942196	(241014226)	+	GA-rich	Low_complexity	20	321	(0)	10610
38	0.0	0.0	0.0	chr1	7942207	7942241	(241014181)	+	(GGA)n	Simple_repeat	1	35	(0)	10611
264	28.9	2.4	0.0	chr1	8155663	8155745	(240800677)	C	L4_B_Mam	LINE/RTE-X	(2442)	2499	2415	11038
16	19.2	0.0	4.4	chr1	8155771	8155815	(240800607)	+	GA-rich	Low_complexity	1	45	(0)	11039
1130	17.0	0.0	0.0	chr1	8155889	8156059	(240800363)	C	AluJb	SINE/Alu	(12)	300	130	11040
26	17.2	0.0	1.8	chr1	8232328	8232382	(240724040)	+	GA-rich	Low_complexity	1	55	(0)	11233
16	20.2	2.1	2.1	chr1	8315097	8315148	(240641274)	+	(CTCCCT)n	Simple_repeat	1	52	(0)	11453
2020	6.0	2.0	8.2	chr1	8877574	8877891	(240078531)	+	AluSp	SINE/Alu	1	298	(15)	12445
15	21.8	0.0	5.7	chr1	8878056	8878108	(240078314)	+	(GCGCGG)n	Simple_repeat	1	53	(0)	12446
1999	10.4	4.7	1.7	chr1	9318908	9319196	(239637226)	+	AluSx	SINE/Alu	1	298	(14)	13368
31	4.2	1.9	3.7	chr1	9319389	9319444	(239636978)	+	(CTCCTCC)n	Simple_repeat	1	54	(0)	13369
14	31.3	1.9	0.0	chr1	9350574	9350627	(239605795)	+	(GTGT)n	Simple_repeat	1	55	(0)	13410
221	24.8	16.8	1.5	chr1	9718362	9718492	(239237930)	C	MIR3	SINE/MIR	(4)	204	50	14242
17	27.1	1.3	3.9	chr1	10210638	10210713	(238745709)	+	(CACCGCC)n	Simple_repeat	1	77	(0)	15342
31	31.3	0.7	2.9	chr1	10629740	10629875	(238326547)	+	GA-rich	Low_complexity	1	137	(0)	16158
20	28.0	1.4	1.4	chr1	11650733	11650803	(237305619)	+	(CCT)n	Simple_repeat	1	72	(0)	18156
3118	24.4	5.2	1.3	chr1	12083707	12084082	(236872340)	+	L1ME3	LINE/L1	5761	6154	(8)	19113
366	23.4	23.5	0.0	chr1	12084125	12084342	(236872080)	C	L2	LINE/L2	(675)	2744	2460	19115
194	34.4	9.9	1.5	chr1	12168698	12168892	(236787530)	+	L2c	LINE/L2	2651	2863	(556)	19304
25	4.3	8.3	0.0	chr1	12191555	12191602	(236764820)	+	(GCGGAGAGTA)n	Simple_repeat	1	52	(0)	19350
31	8.0	0.0	0.0	chr1	13731314	13731353	(235225069)	+	(AC)n	Simple_repeat	1	40	(0)	21959
15	29.2	0.0	3.4	chr1	15617497	15617555	(233338867)	+	G-rich	Low_complexity	1	59	(0)	25685
16	10.4	3.2	0.0	chr1	15617534	15617564	(233338858)	+	(GAGC)n	Simple_repeat	1	32	(0)	25686
21	13.9	0.0	2.3	chr1	15617628	15617670	(233338752)	+	G-rich	Low_complexity	1	43	(0)	25687
225	26.2	11.0	0.7	chr1	15799938	15800084	(233156338)	C	MIR3	SINE/MIR	(47)	161	2	26067
15	15.2	0.0	5.0	chr1	15848302	15848341	(233108081)	+	(GCGTCGG)n	Simple_repeat	1	40	(0)	26204
302	33.8	4.2	2.1	chr1	16085327	16085471	(232870951)	C	MIRb	SINE/MIR	(6)	256	102	26655
12	15.9	5.7	0.0	chr1	16087936	16087970	(232868452)	+	(CCTCCCT)n	Simple_repeat	1	37	(0)	26662
225	21.6	20.0	1.7	chr1	16720297	16720379	(232236043)	+	MIRb	SINE/MIR	26	126	(142)	28008
434	29.2	2.0	0.2	chr1	17569030	17569163	(231387259)	+	MIRc	SINE/MIR	37	174	(88)	29760
310	31.4	7.2	0.3	chr1	18399480	18399635	(230556787)	C	MIR3	SINE/MIR	(96)	172	5	31552
238	26.9	15.3	4.8	chr1	19695562	19695729	(229260693)	+	MIR3	SINE/MIR	17	205	(3)	34243
421	26.9	9.0	0.9	chr1	20494772	20494962	(228461460)	C	MIR3	SINE/MIR	(3)	205	7	35900
30	12.5	0.0	1.9	chr1	20553764	20553817	(228402605)	+	(AGG)n	Simple_repeat	1	54	(0)	36031
11	24.9	0.0	2.5	chr1	20554022	20554061	(228402361)	+	(CCCCGG)n	Simple_repeat	1	40	(0)	36032
245	28.7	12.8	3.4	chr1	21177346	21177493	(227778929)	C	MIRb	SINE/MIR	(45)	223	60	37303
825	26.3	8.9	5.5	chr1	21453623	21453988	(227502434)	+	ERVL-E-int	LTR/ERVL	1518	1897	(3770)	37952
404	27.1	0.0	0.0	chr1	21454011	21454095	(227502327)	+	LTR16B2	LTR/ERVL	1	85	(377)	37953
165	15.8	0.7	0.7	chr1	21604795	21605088	(227351334)	+	(GGAT)n	Simple_repeat	1	296	(0)	38274
16	19.5	0.0	0.0	chr1	21782991	21783025	(227173397)	+	(CCG)n	Simple_repeat	1	35	(0)	38657
339	33.5	10.2	0.0	chr1	22880608	22880801	(226075621)	+	MIRb	SINE/MIR	22	237	(31)	41157
756	24.1	6.0	9.2	chr1	23421140	23421400	(225535022)	C	MIR	SINE/MIR	(10)	252	1	42373
319	29.1	7.9	0.0	chr1	23626408	23626524	(225329898)	+	MIR3	SINE/MIR	81	207	(1)	42920
724	20.7	3.3	0.0	chr1	23635206	23635350	(225321072)	C	MIR	SINE/MIR	(6)	256	107	42948
2620	26.4	12.9	10.0	chr1	23709221	23709849	(225246573)	C	L2a	LINE/L2	(1214)	2205	1537	43153
5024	12.7	1.6	3.9	chr1	23837781	23838651	(225117771)	+	LTR1A2	LTR/ERV1	7	803	(34)	43485
14	9.3	0.0	0.0	chr1	24108532	24108554	(224847868)	+	(CTC)n	Simple_repeat	1	23	(0)	44149
321	32.1	6.5	5.9	chr1	24108705	24108873	(224847549)	C	MIRc	SINE/MIR	(65)	203	34	44150
281	28.4	3.3	7.9	chr1	24108884	24109009	(224847413)	+	MIR3	SINE/MIR	10	129	(79)	44151
35	16.6	3.1	4.0	chr1	24502195	24502290	(224454132)	+	GA-rich	Low_complexity	1	99	(0)	45042
23	16.5	3.7	0.0	chr1	24502737	24502790	(224453632)	+	(CCCCCG)n	Simple_repeat	1	56	(0)	45043
576	23.3	1.5	2.9	chr1	24955786	24955922	(224000500)	+	L2a	LINE/L2	3288	3422	(4)	46069
244	16.7	0.0	0.0	chr1	24956024	24956065	(224000357)	C	L2b	LINE/L2	(13)	3362	3321	46072
677	29.1	6.9	3.6	chr1	25880314	25880566	(223075856)	+	MIR	SINE/MIR	4	265	(3)	48011
389	30.7	10.5	3.3	chr1	25880712	25880984	(223075438)	C	L2c	LINE/L2	(170)	3217	2923	48012
15	13.4	0.0	10.0	chr1	27234576	27234625	(221721797)	+	(CGCAGG)n	Simple_repeat	1	50	(0)	51286
16	32.7	0.0	0.0	chr1	27234693	27234745	(221721677)	+	(GT)n	Simple_repeat	1	53	(0)	51287
14	26.2	5.1	0.0	chr1	27357710	27357768	(221598654)	+	(CCTGCT)n	Simple_repeat	1	62	(0)	51574
566	31.7	8.1	0.0	chr1	27381534	27381760	(221574662)	C	MIRb	SINE/MIR	(7)	261	15	51610
16	4.5	0.0	0.0	chr1	27523108	27523130	(221433292)	+	(CAGA)n	Simple_repeat	1	23	(0)	51957
403	30.4	16.9	0.2	chr1	27542523	27542734	(221413688)	C	MIRb	SINE/MIR	(4)	258	8	52004
22	17.3	5.0	1.6	chr1	27566641	27566700	(221389722)	+	GA-rich	Low_complexity	1	63	(0)	52039
27	24.1	5.0	1.0	chr1	27603753	27603859	(221352563)	+	(CTCT)n	Simple_repeat	1	111	(0)	52102
21	15.3	1.8	5.2	chr1	27603927	27603983	(221352439)	+	(TCCC)n	Simple_repeat	1	58	(0)	52103
19	22.0	6.9	4.8	chr1	27604061	27604176	(221352246)	+	(CCTCGC)n	Simple_repeat	1	124	(0)	52104
12	25.3	0.0	2.5	chr1	27604230	27604269	(221352153)	+	G-rich	Low_complexity	1	40	(0)	52105
238	26.0	10.5	0.0	chr1	27607135	27607211	(221349211)	C	MIRc	SINE/MIR	(120)	148	63	52109
15	24.9	0.0	2.0	chr1	27607474	27607522	(221348900)	+	G-rich	Low_complexity	1	49	(0)	52110
446	32.0	2.0	0.7	chr1	27872758	27872905	(221083517)	+	MIRb	SINE/MIR	54	203	(65)	52721
245	19.2	1.9	0.0	chr1	27873159	27873210	(221083212)	+	L2b	LINE/L2	3109	3161	(214)	52722
372	29.2	0.0	0.0	chr1	28882364	28882459	(220073963)	+	MIRc	SINE/MIR	57	152	(116)	55396
205	23.5	9.6	0.0	chr1	28884404	28884507	(220071915)	+	MIRc	SINE/MIR	87	210	(58)	55401
2648	4.3	0.0	0.0	chr1	28888626	28888926	(220067496)	C	AluY	SINE/Alu	(10)	301	1	55413
198	25.6	15.8	0.8	chr1	30084247	30084364	(218872058)	C	MIR3	SINE/MIR	(16)	192	54	57813
451	29.2	2.4	3.6	chr1	30084593	30084759	(218871663)	+	MLT1O	LTR/ERVL-MaLR	74	238	(304)	57814
534	24.1	5.9	3.9	chr1	30132251	30132445	(218823977)	+	MIRb	SINE/MIR	34	231	(37)	57909
64	13.5	5.0	2.0	chr1	30524641	30524781	(218431641)	+	A-rich	Low_complexity	1	148	(0)	58565
372	23.7	0.0	0.0	chr1	30808188	30808263	(218148159)	C	L2b	LINE/L2	(213)	3162	3087	59121
462	25.3	14.0	0.0	chr1	30808274	30808439	(218147983)	+	MIRc	SINE/MIR	41	233	(35)	59122
238	20.0	1.4	10.3	chr1	30808556	30808633	(218147789)	C	MIRc	SINE/MIR	(132)	136	66	59123
2360	11.3	0.7	0.0	chr1	30808634	30808942	(218147480)	+	AluSx	SINE/Alu	1	311	(1)	59124
11	20.6	2.9	0.0	chr1	30853460	30853493	(218102929)	+	(CCCCAT)n	Simple_repeat	1	35	(0)	59227
292	38.8	0.6	0.6	chr1	30853826	30853986	(218102436)	+	L2b	LINE/L2	2722	2882	(537)	59228
285	27.5	14.4	6.2	chr1	31182739	31182916	(217773506)	+	MIRb	SINE/MIR	37	231	(37)	60052
310	28.2	10.0	4.4	chr1	31796434	31796592	(217159830)	C	MIRb	SINE/MIR	(93)	175	13	61327
372	30.9	4.6	1.8	chr1	32179169	32179330	(216777092)	C	MIR3	SINE/MIR	(85)	183	20	62269
258	29.5	11.0	2.7	chr1	32221376	32221525	(216734897)	+	L2b	LINE/L2	3055	3218	(157)	62332
12	16.2	12.7	0.0	chr1	32771673	32771727	(216184695)	+	(AGCTCC)n	Simple_repeat	1	62	(0)	63700
14	27.3	0.0	3.6	chr1	33181241	33181328	(215775094)	+	G-rich	Low_complexity	1	84	(0)	64626
185	29.1	17.7	4.2	chr1	33350207	33350371	(215606051)	C	MIR	SINE/MIR	(2)	260	69	64946
199	22.5	0.0	0.0	chr1	33350423	33350462	(215605960)	+	MIR	SINE/MIR	219	258	(4)	64944
344	26.7	3.2	0.0	chr1	34859978	34860067	(214096355)	C	L2c	LINE/L2	(5)	3382	3290	67556
15	9.1	0.0	0.0	chr1	35557306	35557329	(213399093)	+	(GGA)n	Simple_repeat	1	24	(0)	68976
12	23.3	3.7	3.6	chr1	36320846	36320899	(212635523)	+	(CCTCA)n	Simple_repeat	1	56	(0)	70644
20	22.5	0.0	6.6	chr1	36323645	36323653	(212632769)	+	(GGCGG)n	Simple_repeat	1	13	(63)	70647
12	8.4	0.0	6.9	chr1	36323654	36323682	(212632740)	+	G-rich	Low_complexity	1	29	(0)	70648
20	22.5	0.0	6.6	chr1	36323683	36323720	(212632702)	+	(GGCGG)n	Simple_repeat	14	76	(0)	70647
475	30.6	11.5	1.0	chr1	36323837	36324031	(212632391)	C	MIRb	SINE/MIR	(22)	246	29	70649
14	21.2	0.0	9.2	chr1	38006211	38006275	(210950147)	+	G-rich	Low_complexity	1	65	(0)	73900
12	8.1	3.6	3.5	chr1	38006427	38006454	(210949968)	+	GA-rich	Low_complexity	1	29	(0)	73901
357	27.5	13.8	2.2	chr1	38006709	38006842	(210949580)	+	L2a	LINE/L2	3275	3426	(0)	73902
14	23.4	6.8	2.5	chr1	39408911	39408920	(209547502)	+	(TCGTCC)n	Simple_repeat	1	22	(57)	76677
17	15.9	4.8	0.0	chr1	39408921	39408962	(209547460)	+	(CCCCGG)n	Simple_repeat	1	44	(0)	76678
14	23.4	6.8	2.5	chr1	39408963	39408984	(209547438)	+	(TCGTCC)n	Simple_repeat	23	79	(0)	76677
14	14.1	7.7	0.0	chr1	39409005	39409043	(209547379)	+	(GGCGC)n	Simple_repeat	1	42	(0)	76679
12	19.7	2.3	4.4	chr1	39409058	39409101	(209547321)	+	(AGCC)n	Simple_repeat	1	45	(0)	76680
22	13.9	5.3	1.7	chr1	40299750	40299809	(208656613)	+	G-rich	Low_complexity	1	62	(0)	78544
12	3.3	12.1	2.7	chr1	40299918	40299950	(208656472)	+	(CCCCTT)n	Simple_repeat	1	37	(0)	78545
278	29.0	3.0	3.7	chr1	40820674	40820809	(208135613)	C	L2	LINE/L2	(1155)	2264	2130	79572
989	18.8	0.0	0.0	chr1	41242869	41243033	(207713389)	C	FRAM	SINE/Alu	(11)	165	1	80411
17	11.9	5.4	0.0	chr1	41331173	41331209	(207625213)	+	GA-rich	Low_complexity	1	39	(0)	80593
17	22.1	0.0	0.0	chr1	41513602	41513644	(207442778)	+	(CTCATC)n	Simple_repeat	1	43	(0)	80950
360	32.3	4.5	0.0	chr1	41513817	41513943	(207442479)	+	MIRc	SINE/MIR	112	244	(24)	80951
17	26.3	3.1	1.5	chr1	42335243	42335307	(206621115)	+	(CCG)n	Simple_repeat	1	67	(0)	82310
18	8.7	0.0	0.0	chr1	43592645	43592669	(205363753)	+	(AC)n	Simple_repeat	1	25	(0)	84532
13	24.9	0.0	0.0	chr1	43946812	43946849	(205009573)	+	(GCCGG)n	Simple_repeat	1	38	(0)	85206
521	29.8	5.9	0.9	chr1	44045312	44045538	(204910884)	+	L2	LINE/L2	2059	2297	(1122)	85326
202	21.7	0.0	0.0	chr1	44617723	44617768	(204338654)	C	MIR1_Amn	SINE/MIR	(81)	149	104	86380
17	38.9	0.0	1.2	chr1	44618254	44618335	(204338087)	+	(CA)n	Simple_repeat	1	82	(0)	86381
19	13.9	2.3	2.3	chr1	46133199	46133241	(202823181)	+	A-rich	Low_complexity	1	44	(0)	89405
201	32.9	1.4	2.7	chr1	46544914	46544988	(202411434)	C	MIRb	SINE/MIR	(77)	191	118	90225
201	27.7	0.0	0.0	chr1	46545134	46545180	(202411242)	+	L2b	LINE/L2	3291	3337	(38)	90226
280	31.9	12.2	3.2	chr1	47638559	47638804	(201317618)	C	L2b	LINE/L2	(174)	3201	2931	92013
216	23.5	0.0	1.9	chr1	47638876	47638927	(201317495)	C	L2c	LINE/L2	(15)	3360	3310	92017
18	19.4	9.5	2.5	chr1	52568190	52568263	(196388159)	+	(TC)n	Simple_repeat	1	81	(0)	101130
214	35.4	7.5	4.6	chr1	53048060	53048343	(195908079)	C	L2b	LINE/L2	(7)	3368	3076	102361
347	38.3	9.0	5.3	chr1	53048382	53048701	(195907721)	+	L2b	LINE/L2	3039	3371	(4)	102362
240	29.6	5.0	1.7	chr1	53325467	53325583	(195630839)	C	MIRc	SINE/MIR	(72)	196	76	102871
218	29.4	9.2	6.3	chr1	53325741	53325867	(195630555)	+	L2c	LINE/L2	3255	3385	(2)	102872
17	20.5	1.6	6.2	chr1	53328160	53328222	(195628200)	+	(CCT)n	Simple_repeat	1	64	(0)	102876
246	27.4	5.6	2.9	chr1	53328347	53328485	(195627937)	C	L2c	LINE/L2	(222)	3165	3023	102877
233	32.8	5.3	8.9	chr1	53543314	53543527	(195412895)	C	MIRb	SINE/MIR	(37)	231	26	103285
273	30.2	1.6	0.3	chr1	54127627	54127784	(194828638)	+	L2c	LINE/L2	2929	3091	(284)	104471
298	25.0	3.6	1.2	chr1	54127909	54127989	(194828433)	+	LTR33	LTR/ERVL	13	95	(420)	104472
338	37.1	4.3	0.5	chr1	54212840	54213042	(194743380)	C	MIRb	SINE/MIR	(54)	214	4	104681
243	24.1	15.3	4.1	chr1	54377402	54377522	(194578900)	C	MIRc	SINE/MIR	(85)	183	47	104956
566	25.2	3.9	0.0	chr1	54416953	54417075	(194539347)	+	L2a	LINE/L2	3295	3422	(4)	105014
464	30.1	5.7	1.1	chr1	54464053	54464237	(194492185)	C	MIRb	SINE/MIR	(54)	214	21	105139
229	31.6	7.9	1.7	chr1	54464248	54464366	(194492056)	C	MIRc	SINE/MIR	(102)	166	40	105140
12	12.4	0.0	6.5	chr1	54464652	54464682	(194491740)	+	(TCCTT)n	Simple_repeat	1	31	(0)	105141
30	0.0	9.3	0.0	chr1	54490553	54490595	(194465827)	+	(CCCCT)n	Simple_repeat	1	47	(0)	105202
14	15.1	6.2	3.9	chr1	54490686	54490733	(194465689)	+	(GCT)n	Simple_repeat	1	51	(0)	105203
22	11.9	0.0	0.0	chr1	55039870	55039906	(193916516)	+	(GCT)n	Simple_repeat	1	37	(0)	106404
189	24.2	5.7	0.0	chr1	55040106	55040171	(193916251)	+	MIR3	SINE/MIR	109	178	(30)	106405
23	5.7	2.6	2.5	chr1	59297041	59297079	(189659343)	+	(CCT)n	Simple_repeat	1	40	(0)	114621
23	15.3	0.0	5.4	chr1	65066726	65066781	(183889641)	+	(TCC)n	Simple_repeat	1	56	(0)	125013
12	16.8	0.0	0.0	chr1	65066925	65066951	(183889471)	+	(CCCCT)n	Simple_repeat	1	27	(0)	125014
1878	25.8	7.0	1.6	chr1	66739646	66740200	(182216222)	C	LTR67B	LTR/ERVL	(8)	612	26	127694
18	22.1	2.1	0.0	chr1	67833185	67833232	(181123190)	+	(CTTC)n	Simple_repeat	1	49	(0)	129656
16	24.3	3.3	1.6	chr1	67833273	67833332	(181123090)	+	(CGCCG)n	Simple_repeat	1	62	(0)	129657
11	13.4	5.7	2.7	chr1	67833344	67833378	(181123044)	+	(CCGCCG)n	Simple_repeat	1	37	(0)	129658
19	6.8	3.2	0.0	chr1	67833416	67833446	(181122976)	+	(CCT)n	Simple_repeat	1	32	(0)	129659
20	7.7	15.3	2.4	chr1	87328746	87328817	(161627605)	+	(GAGC)n	Simple_repeat	1	83	(0)	156907
21	29.0	2.6	3.1	chr1	87328818	87328847	(161627575)	+	G-rich	Low_complexity	3	103	(0)	156908
464	24.3	11.7	0.0	chr1	89800566	89800709	(159155713)	+	MER5A1	DNA/hAT-Charlie	1	163	(3)	160367
13	9.7	0.0	0.0	chr1	93180359	93180380	(155776042)	+	(GGC)n	Simple_repeat	1	22	(0)	165855
6547	11.1	2.3	14.6	chr1	95138434	95138905	(153817517)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	946	168920
13	23.6	1.9	3.7	chr1	108200192	108200244	(140756178)	+	G-rich	Low_complexity	1	54	(0)	186508
46	20.3	0.8	3.3	chr1	109042229	109042348	(139914074)	+	(GGCGG)n	Simple_repeat	1	121	(0)	187838
257	24.0	1.3	1.3	chr1	109151173	109151248	(139805174)	+	MER5A	DNA/hAT-Charlie	89	164	(25)	188113
15	8.3	0.0	3.6	chr1	109151315	109151342	(139805080)	+	(AGGG)n	Simple_repeat	1	28	(0)	188114
794	22.7	8.5	1.6	chr1	109307517	109307758	(139648664)	+	MIRb	SINE/MIR	1	260	(8)	188372
14	0.0	4.8	0.0	chr1	109892971	109892991	(139063431)	+	(CTC)n	Simple_repeat	1	22	(0)	189234
275	33.0	10.5	2.0	chr1	109893091	109893293	(139063129)	+	MIRb	SINE/MIR	21	233	(35)	189235
351	30.4	11.5	1.0	chr1	109981071	109981279	(138975143)	+	L2c	LINE/L2	2910	3143	(244)	189389
304	34.5	6.1	0.0	chr1	110097853	110097991	(138858431)	C	MIR1_Amn	SINE/MIR	(79)	151	4	189539
12	4.7	4.5	0.0	chr1	111619749	111619770	(137336652)	+	(GCGT)n	Simple_repeat	1	23	(0)	191803
22	24.0	0.0	0.0	chr1	111619785	111619838	(137336584)	+	(CGC)n	Simple_repeat	1	54	(0)	191804
43	2.3	0.0	0.0	chr1	111619876	111619919	(137336503)	+	(GGAGGAGGT)n	Simple_repeat	1	44	(0)	191805
95	25.1	3.8	3.7	chr1	111894870	111895237	(137061185)	+	GA-rich	Low_complexity	1	382	(0)	192267
13	15.5	5.6	0.0	chr1	112506876	112506911	(136449511)	+	(CTCCAA)n	Simple_repeat	1	38	(0)	193233
1237	25.0	10.8	1.4	chr1	112506976	112507401	(136449021)	+	L2a	LINE/L2	2956	3426	(0)	193234
226	23.5	5.5	0.0	chr1	113141262	113141329	(135815093)	C	MIRc	SINE/MIR	(39)	229	158	194557
711	14.8	19.8	0.0	chr1	116795801	116795942	(132160480)	+	LTR38B	LTR/ERV1	269	445	(165)	200279
19	12.6	4.4	2.1	chr1	116909989	116910033	(132046389)	+	GA-rich	Low_complexity	1	47	(0)	200486
29	27.9	0.9	3.6	chr1	116910072	116910182	(132046240)	+	GA-rich	Low_complexity	1	112	(0)	200486
213	24.1	1.6	2.8	chr1	117060732	117060815	(131895607)	+	MIR3	SINE/MIR	64	147	(115)	200698
45	2.3	0.0	0.0	chr1	117367314	117367358	(131589064)	+	(GAG)n	Simple_repeat	1	45	(0)	201206
14	4.7	0.0	4.2	chr1	117367469	117367492	(131588930)	+	(GCG)n	Simple_repeat	1	24	(0)	201207
12	8.0	0.0	9.4	chr1	151715005	151715036	(97241386)	+	(CCCT)n	Simple_repeat	1	32	(0)	221780
1232	11.1	0.0	1.2	chr1	151977397	151977567	(96978855)	C	AluSx	SINE/Alu	(12)	300	132	222216
12	8.4	0.0	6.9	chr1	153728480	153728508	(95227914)	+	GA-rich	Low_complexity	1	29	(0)	224670
18	34.4	0.0	0.0	chr1	153728659	153728731	(95227691)	+	(GCA)n	Simple_repeat	1	73	(0)	224671
13	8.7	0.0	3.7	chr1	154729605	154729641	(94226781)	+	(ATAAA)n	Simple_repeat	1	35	(0)	226679
378	22.9	5.9	0.0	chr1	154752507	154752602	(94203820)	+	MIRc	SINE/MIR	81	182	(86)	226711
301	32.7	4.7	3.6	chr1	155030900	155031067	(93925355)	+	MIR3	SINE/MIR	24	193	(15)	227228
336	22.6	16.2	0.8	chr1	156003724	156003848	(92952574)	+	MIRc	SINE/MIR	9	156	(112)	229263
228	26.4	6.2	0.0	chr1	156079927	156080017	(92876405)	+	L3b	LINE/CR1	4937	5033	(199)	229432
12	13.2	5.7	2.7	chr1	156405968	156406002	(92550420)	+	(CCT)n	Simple_repeat	1	37	(0)	230098
18	18.4	3.9	1.9	chr1	156669898	156669948	(92286474)	+	(CCT)n	Simple_repeat	1	53	(0)	230545
15	16.1	0.0	0.0	chr1	156670114	156670142	(92286280)	+	(CTC)n	Simple_repeat	1	29	(0)	230546
22	26.1	3.1	3.0	chr1	156751706	156751805	(92204617)	+	(CCTCCC)n	Simple_repeat	1	100	(0)	230674
15	11.6	4.2	4.0	chr1	156913062	156913106	(92043316)	+	GA-rich	Low_complexity	1	45	(0)	230977
215	31.1	12.5	0.0	chr1	156914205	156914323	(92042099)	+	MIRb	SINE/MIR	42	177	(91)	230978
19	15.1	5.7	1.8	chr1	156914558	156914610	(92041812)	+	(TGGAG)n	Simple_repeat	1	56	(0)	230979
24	12.7	4.5	4.3	chr1	161197366	161197431	(87758991)	+	G-rich	Low_complexity	1	69	(0)	237060
16	20.2	5.0	3.2	chr1	164558902	164558961	(84397461)	+	GA-rich	Low_complexity	1	63	(0)	242314
20	13.9	7.0	1.6	chr1	164559013	164559069	(84397353)	+	(CCCTCCT)n	Simple_repeat	1	61	(0)	242315
37	7.2	3.4	0.0	chr1	164559076	164559134	(84397288)	+	(CCT)n	Simple_repeat	1	61	(0)	242316
12	24.1	0.0	2.4	chr1	166839354	166839394	(82117028)	+	(GGCGCC)n	Simple_repeat	1	41	(0)	245775
17	19.4	2.0	3.9	chr1	167629834	167629884	(81326538)	+	GA-rich	Low_complexity	1	52	(0)	247028
29	7.2	4.5	5.8	chr1	167630161	167630226	(81326196)	+	(CCTC)n	Simple_repeat	1	69	(0)	247029
23	14.2	2.7	7.9	chr1	167630227	167630234	(81326188)	+	(CCT)n	Simple_repeat	1	70	(0)	247030
215	21.9	0.0	2.4	chr1	167670601	167670642	(81285780)	C	MIRb	SINE/MIR	(194)	74	34	247107
319	29.3	8.3	3.7	chr1	167670705	167670945	(81285477)	+	L2a	LINE/L2	2474	2726	(693)	247108
479	31.0	6.5	8.8	chr1	168431748	168432325	(80524097)	C	L2b	LINE/L2	(0)	3375	2765	248395
28	3.0	2.9	0.0	chr1	169106609	169106642	(79849780)	+	(CCG)n	Simple_repeat	1	35	(0)	249449
14	16.1	0.0	0.0	chr1	174022262	174022289	(74934133)	+	(CTG)n	Simple_repeat	1	28	(0)	256537
24	24.9	0.0	1.5	chr1	174022311	174022378	(74934044)	+	(CCT)n	Simple_repeat	1	68	(0)	256538
578	29.4	0.6	2.4	chr1	178513545	178513711	(70442711)	C	MIRb	SINE/MIR	(78)	190	27	263192
14	9.6	0.0	0.0	chr1	179882205	179882227	(69074195)	+	(TCC)n	Simple_repeat	1	23	(0)	265466
12	19.6	2.9	0.0	chr1	179954761	179954795	(69001627)	+	(CGCAGC)n	Simple_repeat	1	36	(0)	265605
73	14.6	2.4	4.1	chr1	181124450	181124616	(67831806)	+	(CTC)n	Simple_repeat	1	171	(0)	267510
326	20.7	16.2	3.2	chr1	183932201	183932368	(65024054)	+	MIR	SINE/MIR	20	208	(60)	271862
519	28.8	4.6	0.0	chr1	197767960	197768105	(51188317)	+	MIR	SINE/MIR	88	240	(22)	290328
17	12.9	0.0	5.3	chr1	197768115	197768136	(51188286)	+	(GCT)n	Simple_repeat	1	22	(0)	290329
84	10.1	0.7	0.7	chr1	197768137	197768276	(51188146)	+	(CTC)n	Simple_repeat	1	141	(0)	290330
17	12.9	0.0	5.3	chr1	197768277	197768291	(51188131)	+	(GCT)n	Simple_repeat	2	15	(0)	290331
15	9.1	0.0	0.0	chr1	197768292	197768300	(51188122)	+	(ACT)n	Simple_repeat	1	24	(0)	290332
2598	15.3	8.3	16.4	chr1	200638765	200639134	(48317288)	+	MER6A	DNA/TcMar-Tigger	52	327	(278)	294690
2570	8.1	0.3	0.3	chr1	200639135	200639441	(48316981)	C	AluSp	SINE/Alu	(6)	307	1	294692
14	15.9	0.0	0.0	chr1	200738938	200738965	(48217457)	+	(GCG)n	Simple_repeat	1	28	(0)	294914
14	16.3	4.0	9.1	chr1	200739105	200739178	(48217244)	+	(GACGG)n	Simple_repeat	1	77	(0)	294915
19	23.2	6.0	2.2	chr1	200739179	200739185	(48217237)	+	(GGCGAC)n	Simple_repeat	4	87	(0)	294916
17	25.3	8.4	0.0	chr1	200899100	200899182	(48057240)	+	GA-rich	Low_complexity	1	90	(0)	295179
17	12.9	7.0	0.0	chr1	200899350	200899357	(48057065)	+	(GCATGT)n	Simple_repeat	1	43	(0)	295180
20	14.4	0.0	0.0	chr1	200899358	200899389	(48057033)	+	(TG)n	Simple_repeat	1	32	(0)	295181
68	12.6	0.8	1.7	chr1	201111901	201112019	(47844403)	+	(TCC)n	Simple_repeat	1	120	(0)	295518
13	12.8	5.9	0.0	chr1	201139210	201139243	(47817179)	+	(CTCCTCC)n	Simple_repeat	1	36	(0)	295558
1726	15.2	0.4	0.4	chr1	201916260	201916516	(47039906)	+	AluJb	SINE/Alu	28	284	(28)	296830
30	0.0	0.0	0.0	chr1	201916517	201916545	(47039877)	+	(AAAAC)n	Simple_repeat	1	29	(0)	296831
13	18.3	2.6	2.5	chr1	201916656	201916694	(47039728)	+	G-rich	Low_complexity	1	40	(0)	296832
326	28.4	2.4	3.7	chr1	202162886	202163047	(46793375)	+	MIR	SINE/MIR	18	173	(95)	297409
238	33.8	4.8	5.4	chr1	202645933	202646079	(46310343)	C	MIRc	SINE/MIR	(64)	204	59	298242
225	25.1	19.8	3.7	chr1	202646195	202646530	(46309892)	+	L2a	LINE/L2	2933	3355	(20)	298243
593	16.4	7.2	0.0	chr1	204659123	204659238	(44297184)	+	Tigger12	DNA/TcMar-Tigger	2351	2475	(0)	302016
36	0.0	0.0	0.0	chr1	204659610	204659640	(44296782)	+	(GT)n	Simple_repeat	1	31	(0)	302017
321	23.4	0.0	2.5	chr1	204659643	204659721	(44296701)	C	Tigger19a	DNA/TcMar-Tigger	(63)	260	184	302018
521	18.4	1.0	1.0	chr1	204797725	204797823	(44158599)	+	LTR33	LTR/ERVL	417	515	(0)	302276
385	27.0	3.9	1.0	chr1	204797829	204797929	(44158493)	C	L2a	LINE/L2	(0)	3426	3323	302282
303	31.4	3.5	2.5	chr1	204798108	204798225	(44158197)	+	MIR3	SINE/MIR	46	159	(49)	302283
180	28.8	0.0	5.7	chr1	205012786	205012855	(43943567)	+	L3	LINE/CR1	1969	2034	(2065)	302629
17	10.7	0.0	3.1	chr1	206481442	206481473	(42474949)	+	(GGA)n	Simple_repeat	1	32	(0)	305159
2541	2.1	0.0	0.0	chr1	206481767	206482078	(42474344)	C	AluYa5	SINE/Alu	(0)	311	1	305160
38	14.7	2.2	3.3	chr1	207807752	207807847	(41148575)	+	G-rich	Low_complexity	1	94	(0)	307155
546	30.1	0.0	2.2	chr1	211701869	211702007	(37254415)	+	MIRb	SINE/MIR	1	136	(132)	313222
341	24.8	4.6	7.4	chr1	212468058	212468192	(36488230)	+	LTR33	LTR/ERVL	167	297	(218)	314564
13	22.0	2.2	2.2	chr1	212665501	212665545	(36290877)	+	(CTCTTCC)n	Simple_repeat	1	46	(0)	314923
14	12.2	0.0	0.0	chr1	212665650	212665676	(36290746)	+	(CTCCC)n	Simple_repeat	1	27	(0)	314924
15	11.6	0.0	3.3	chr1	213051371	213051400	(35905022)	+	(GGC)n	Simple_repeat	1	30	(0)	315638
13	0.0	0.0	4.8	chr1	215567283	215567303	(33389119)	+	(TCC)n	Simple_repeat	1	21	(0)	319244
799	17.6	0.0	0.0	chr1	219700363	219700487	(29255935)	+	AluJb	SINE/Alu	1	125	(187)	325005
215	29.9	11.2	1.6	chr1	223143482	223143610	(25812812)	C	MIR1_Amn	SINE/MIR	(78)	152	10	330276
23	7.0	0.0	0.0	chr1	223178681	223178710	(25777712)	+	(TG)n	Simple_repeat	1	30	(0)	330334
255	26.5	7.5	1.0	chr1	223501024	223501122	(25455300)	+	LTR79	LTR/ERVL	75	180	(347)	330791
21	28.0	7.8	2.6	chr1	223501145	223501285	(25455137)	+	(CTTCT)n	Simple_repeat	1	152	(0)	330792
239	19.6	5.5	0.0	chr1	223501372	223501422	(25455000)	C	MIRc	SINE/MIR	(44)	224	171	330793
27	20.1	0.0	0.0	chr1	224434032	224434088	(24522334)	+	(CCT)n	Simple_repeat	1	57	(0)	332548
30	6.3	3.9	1.9	chr1	224434205	224434256	(24522166)	+	(GGA)n	Simple_repeat	1	54	(0)	332549
41	21.7	1.3	6.5	chr1	224434409	224434559	(24521863)	+	G-rich	Low_complexity	1	153	(0)	332550
228	27.3	14.6	0.0	chr1	225812848	225812934	(23143488)	+	MamTip2	DNA/hAT-Tip100	48	149	(156)	334628
389	23.0	23.9	0.2	chr1	225812935	225813099	(23143323)	+	MIR3	SINE/MIR	2	204	(4)	334629
802	29.0	0.5	2.2	chr1	225942114	225942339	(23014083)	+	MIR	SINE/MIR	41	262	(0)	334858
18	10.2	6.8	2.1	chr1	226186453	226186496	(22769926)	+	(GCC)n	Simple_repeat	1	47	(0)	335385
142	18.0	10.8	3.2	chr1	227906278	227906963	(21049459)	+	(TGCCTCCC)n	Simple_repeat	1	738	(0)	338035
249	24.1	2.4	1.7	chr1	227909321	227909995	(21046427)	+	GA-rich	Low_complexity	1	691	(0)	338039
2200	11.6	0.0	0.3	chr1	227910077	227910370	(21046052)	+	AluSg7	SINE/Alu	1	293	(16)	338040
334	26.3	7.0	3.6	chr1	228335910	228336047	(20620375)	+	MIRc	SINE/MIR	7	149	(119)	338568
212	25.0	12.0	3.3	chr1	228362905	228362995	(20593427)	+	MIR3	SINE/MIR	88	187	(21)	338604
40	20.3	4.7	3.0	chr1	228363075	228363202	(20593220)	+	GA-rich	Low_complexity	1	134	(0)	338605
13	24.4	0.0	5.6	chr1	228371420	228371473	(20584949)	+	G-rich	Low_complexity	1	54	(0)	338612
14	16.4	0.0	8.3	chr1	228373556	228373603	(20582819)	+	(ACCCT)n	Simple_repeat	1	48	(0)	338614
320	33.1	0.7	1.4	chr1	228430149	228430295	(20526127)	+	L2	LINE/L2	1789	1934	(1485)	338701
18	26.4	1.4	2.8	chr1	230140355	230140425	(18815997)	+	(CCTGCC)n	Simple_repeat	1	72	(0)	341468
257	27.4	18.5	0.0	chr1	230175394	230175499	(18780923)	+	MIR	SINE/MIR	112	241	(21)	341507
75	15.9	3.8	0.6	chr1	230175527	230175684	(18780738)	+	(TCC)n	Simple_repeat	1	164	(0)	341508
31	23.6	3.3	7.9	chr1	230175685	230175708	(18780714)	+	(TTCCCC)n	Simple_repeat	2	189	(0)	341509
526	29.7	11.0	0.0	chr1	231201776	231201970	(17754452)	C	L2a	LINE/L2	(0)	3426	3208	343098
127	21.2	1.0	2.5	chr1	231202005	231202317	(17754105)	+	GA-rich	Low_complexity	1	316	(0)	343099
318	27.7	4.7	1.6	chr1	231202318	231202464	(17753958)	C	L2a	LINE/L2	(310)	3116	2961	343098
18	20.7	1.6	4.8	chr1	231422324	231422384	(17534038)	+	G-rich	Low_complexity	1	62	(0)	343473
12	17.2	4.9	2.3	chr1	231422410	231422450	(17533972)	+	(CCTCGG)n	Simple_repeat	1	43	(0)	343474
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
1024	27.8	7.8	6.9	chr1	234734209	234734729	(14221693)	C	L2a	LINE/L2	(145)	3281	2749	348347
901	15.2	2.5	2.5	chr1	237056849	237057010	(11899412)	+	MLT1B	LTR/ERVL-MaLR	296	457	(10)	352697
13	18.9	0.0	0.0	chr1	243254979	243255008	(5701414)	+	(GCG)n	Simple_repeat	1	30	(0)	362301
18	13.9	0.0	0.0	chr1	243255125	243255157	(5701265)	+	(TCG)n	Simple_repeat	1	33	(0)	362302
15	16.7	2.4	2.3	chr1	246566454	246566495	(2389927)	+	(CCGCGAG)n	Simple_repeat	1	43	(0)	367694
348	21.9	5.0	4.2	chr1	247390547	247390665	(1565757)	+	MamRep4096	DNA/hAT-Tip100	35	154	(272)	369084
13	29.0	4.0	5.3	chr10	679621	679760	(133117662)	+	(CCCATG)n	Simple_repeat	1	138	(0)	371728
256	28.4	12.8	2.5	chr10	679943	680061	(133117361)	C	MIRb	SINE/MIR	(39)	229	97	371729
2274	12.4	0.0	0.0	chr10	1944138	1944444	(131852978)	C	AluSg	SINE/Alu	(3)	307	1	373109
189	21.9	8.6	0.0	chr10	3074388	3074451	(130722971)	C	L2	LINE/L2	(516)	2903	2834	374591
1507	23.5	1.6	1.6	chr10	3665538	3665904	(130131518)	C	MLT1B	LTR/ERVL-MaLR	(16)	374	8	375397
181	32.4	1.3	0.0	chr10	6593697	6593770	(127203652)	+	L2a	LINE/L2	3113	3187	(239)	379746
13	4.5	0.0	7.4	chr10	11682562	11682588	(122114834)	+	(TTC)n	Simple_repeat	1	27	(0)	387319
63	4.9	4.4	3.4	chr10	11682589	11682702	(122114720)	+	(TCC)n	Simple_repeat	1	119	(0)	387320
19	13.4	0.0	0.0	chr10	11874620	11874653	(121922769)	+	(GGA)n	Simple_repeat	1	34	(0)	387682
316	23.0	10.3	0.9	chr10	17191394	17191507	(116605915)	C	LTR16D	LTR/ERVL	(3)	648	523	396948
273	20.8	10.3	1.0	chr10	17191720	17191816	(116605606)	C	LTR16D	LTR/ERVL	(269)	382	276	396948
38	4.2	1.9	1.9	chr10	21516538	21516589	(112280833)	+	(CCT)n	Simple_repeat	1	53	(0)	403856
54	21.9	2.5	2.5	chr10	22321360	22321365	(111476057)	+	(GAGGCG)n	Simple_repeat	1	39	(122)	405119
56	25.5	0.0	0.0	chr10	22321366	22321502	(111475920)	+	GA-rich	Low_complexity	1	137	(0)	405120
54	21.9	2.5	2.5	chr10	22321503	22321516	(111475906)	+	(GAGGCG)n	Simple_repeat	40	161	(0)	405119
13	21.2	0.0	2.5	chr10	22714013	22714052	(111083370)	+	G-rich	Low_complexity	1	40	(0)	405678
25	15.2	0.0	0.0	chr10	22714113	22714157	(111083265)	+	GA-rich	Low_complexity	1	45	(0)	405679
17	20.6	6.1	2.9	chr10	22714404	22714471	(111082951)	+	(GCC)n	Simple_repeat	1	70	(0)	405680
443	15.8	0.7	3.8	chr10	22714478	22714635	(111082787)	C	LTR27E	LTR/ERV1	(91)	986	834	405681
11	24.1	0.0	0.0	chr10	30434680	30434713	(103362709)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	418706
367	27.7	23.4	1.8	chr10	35448695	35450287	(98347135)	C	L2a	LINE/L2	(438)	2981	941	426604
2006	11.8	3.6	0.0	chr10	42637656	42637951	(91159471)	C	AluSp	SINE/Alu	(6)	307	1	432328
185	26.1	10.7	4.2	chr10	45373676	45373771	(88423651)	+	L2c	LINE/L2	3105	3207	(180)	435977
12	0.0	9.1	0.0	chr10	45438874	45438895	(88358527)	+	(CTCC)n	Simple_repeat	1	24	(0)	436065
1307	19.8	0.7	1.9	chr10	45438946	45439254	(88358168)	+	MER33	DNA/hAT-Charlie	20	324	(0)	436066
1069	25.1	16.8	2.8	chr10	45470139	45470634	(88326788)	C	MLT1E2	LTR/ERVL-MaLR	(38)	589	11	436098
32	7.3	0.0	0.0	chr10	46217442	46217485	(87579937)	+	(CGACTTC)n	Simple_repeat	1	44	(0)	437365
2121	17.7	3.7	0.5	chr10	49134305	49134718	(84662704)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	5	441496
873	26.3	23.4	0.8	chr10	62071911	62072512	(71724910)	C	LTR50	LTR/ERVL	(0)	795	17	459498
218	34.9	1.2	0.0	chr10	69229363	69229445	(64567977)	+	MIRb	SINE/MIR	3	86	(182)	471149
21	12.1	0.0	0.0	chr10	69318820	69318855	(64478567)	+	(GAG)n	Simple_repeat	1	36	(0)	471359
339	29.9	1.6	0.8	chr10	70777849	70777979	(63019443)	C	MIR3	SINE/MIR	(103)	159	29	474105
24	15.6	5.9	2.8	chr10	71212860	71212927	(62584495)	+	(GGC)n	Simple_repeat	1	72	(0)	474802
13	12.2	3.7	0.0	chr10	71213015	71213041	(62584381)	+	(GCT)n	Simple_repeat	1	28	(0)	474803
383	21.9	3.0	0.0	chr10	71359699	71359794	(62437628)	C	MIR3	SINE/MIR	(61)	147	49	475082
943	25.1	1.3	1.7	chr10	71378735	71378948	(62418474)	+	LTR16C	LTR/ERVL	275	487	(2)	475130
341	31.7	8.2	2.4	chr10	71379015	71379140	(62418282)	C	MIRb	SINE/MIR	(38)	230	97	475131
2312	19.5	5.3	5.9	chr10	71379251	71379762	(62417660)	+	LTR54	LTR/ERV1	2	510	(0)	475132
1869	16.7	1.0	0.3	chr10	71630963	71631267	(62166155)	+	AluJb	SINE/Alu	1	307	(5)	475643
339	34.6	0.4	14.0	chr10	71631268	71631481	(62165941)	C	L2a	LINE/L2	(1118)	2301	2124	475639
209	25.7	9.1	0.0	chr10	71838495	71838564	(61958858)	+	L3	LINE/CR1	3821	3897	(202)	475987
871	16.0	1.8	3.0	chr10	71838604	71838772	(61958650)	+	AluJb	SINE/Alu	133	299	(13)	475988
16	23.7	4.4	2.8	chr10	73168204	73168271	(60629151)	+	G-rich	Low_complexity	1	71	(0)	478773
35	0.0	0.0	0.0	chr10	73168309	73168340	(60629082)	+	(GAG)n	Simple_repeat	1	32	(0)	478774
900	27.7	4.2	3.9	chr10	75057914	75058198	(58739224)	+	MLT1J	LTR/ERVL-MaLR	224	509	(3)	482332
15	9.1	0.0	0.0	chr10	75058420	75058443	(58738979)	+	(TCC)n	Simple_repeat	1	24	(0)	482333
945	30.1	4.5	0.3	chr10	75063452	75063774	(58733648)	+	LTR16C	LTR/ERVL	150	486	(3)	482343
1017	26.2	10.5	5.1	chr10	78945719	78946148	(54851274)	+	LTR16A1	LTR/ERVL	1	456	(0)	488747
14	16.7	1.9	7.3	chr10	79047473	79047526	(54749896)	+	(CTCCCCT)n	Simple_repeat	1	55	(0)	488952
12	18.8	2.6	2.6	chr10	79391416	79391453	(54405969)	+	G-rich	Low_complexity	1	39	(0)	489532
511	34.3	15.4	5.0	chr10	79391647	79393512	(54403910)	+	L2b	LINE/L2	569	2664	(755)	489533
27	18.2	0.0	1.7	chr10	97319464	97319521	(36477901)	+	GA-rich	Low_complexity	1	58	(0)	517719
471	25.0	4.2	11.1	chr10	98464142	98464348	(35333074)	+	Charlie23a	DNA/hAT-Charlie	135	326	(13)	519964
334	29.5	17.6	3.6	chr10	98464443	98464695	(35332727)	+	L2b	LINE/L2	3080	3375	(0)	519960
20	6.7	0.0	3.0	chr10	102714290	102714322	(31083100)	+	(CCT)n	Simple_repeat	1	33	(0)	527438
14	18.2	0.0	0.0	chr10	103451607	103451637	(30345785)	+	GA-rich	Low_complexity	1	31	(0)	528984
38	0.0	0.0	0.0	chr10	103451643	103451677	(30345745)	+	(AGG)n	Simple_repeat	1	35	(0)	528985
249	22.5	6.3	1.1	chr10	103695618	103695707	(30101715)	+	MER5A1	DNA/hAT-Charlie	43	137	(29)	529451
348	26.1	4.0	3.2	chr10	103695727	103695849	(30101573)	C	MamRep1879	DNA/hAT-Tip100?	(44)	172	49	529452
311	28.6	5.0	9.5	chr10	103695887	103696046	(30101376)	C	MIRc	SINE/MIR	(93)	175	18	529453
435	26.9	4.1	7.8	chr10	110442349	110442501	(23354921)	+	MIR	SINE/MIR	107	253	(9)	539522
30	19.3	3.5	2.2	chr10	110919488	110919573	(22877849)	+	G-rich	Low_complexity	1	89	(0)	540372
24	9.6	0.0	6.0	chr10	110919593	110919642	(22877780)	+	GA-rich	Low_complexity	1	50	(0)	540373
12	24.2	3.5	3.4	chr10	118046682	118046695	(15750727)	+	(CTCCCT)n	Simple_repeat	1	57	(0)	551476
17	11.8	2.4	4.8	chr10	118046696	118046736	(15750686)	+	(CCT)n	Simple_repeat	1	42	(0)	551477
234	25.7	9.0	7.3	chr10	119469152	119469260	(14328162)	+	MER5B	DNA/hAT-Charlie	5	115	(63)	553935
271	32.9	7.9	3.4	chr10	119516298	119516535	(14280887)	C	MIRb	SINE/MIR	(10)	258	4	554046
37	23.4	1.0	1.9	chr10	119542653	119542755	(14254667)	+	GA-rich	Low_complexity	1	104	(0)	554096
25	11.5	2.0	2.0	chr10	119596497	119596545	(14200877)	+	G-rich	Low_complexity	1	50	(0)	554191
18	7.6	0.0	0.0	chr10	119596640	119596667	(14200755)	+	(AGG)n	Simple_repeat	1	28	(0)	554192
16	13.3	2.1	6.2	chr10	119651217	119651263	(14146159)	+	(CCGCGC)n	Simple_repeat	1	48	(0)	554324
12	25.5	0.0	0.0	chr10	123137015	123137051	(10660371)	+	(TGTC)n	Simple_repeat	1	37	(0)	559852
1568	20.4	7.0	3.6	chr10	124025620	124026032	(9771390)	+	MLT1C	LTR/ERVL-MaLR	35	462	(5)	561254
299	23.7	4.0	4.0	chr10	125149371	125149471	(8647951)	C	AmnSINE1	SINE/5S-Deu-L2	(175)	400	300	563040
229	33.7	3.2	9.7	chr10	125419016	125419511	(8377911)	C	L2b	LINE/L2	(0)	3375	2913	563483
265	31.9	8.9	5.3	chr10	132237248	132237399	(1560023)	+	MIRc	SINE/MIR	65	222	(46)	571443
20	20.4	0.0	0.0	chr10	132420343	132420407	(1377015)	+	(CTTCCT)n	Simple_repeat	1	65	(0)	571625
15	17.8	2.6	0.0	chr10	133196193	133196230	(601192)	+	(CCCCCAC)n	Simple_repeat	1	39	(0)	572255
199	32.1	4.8	2.8	chr10	133196469	133196612	(600810)	+	MIR3	SINE/MIR	9	155	(53)	572256
566	23.2	10.9	0.8	chr10	133196630	133196868	(600554)	C	MER67B	LTR/ERV1	(32)	629	364	572257
402	24.5	3.6	0.9	chr11	267122	267228	(134819394)	C	L2a	LINE/L2	(2)	3424	3315	573177
1074	26.4	7.4	3.5	chr11	742841	743089	(134343533)	C	L1M5	LINE/L1	(357)	5822	5563	573873
21	14.4	4.3	0.0	chr11	790334	790379	(134296243)	+	(GGTG)n	Simple_repeat	1	48	(0)	573952
465	25.4	4.8	0.0	chr11	1844547	1844723	(133241899)	+	L1MC4a	LINE/L1	6677	6862	(1020)	575164
133	17.6	2.3	5.3	chr11	2306721	2307073	(132779549)	+	GA-rich	Low_complexity	1	361	(0)	575657
2145	30.2	6.7	1.9	chr11	2667827	2669518	(132417104)	C	L1ME3A	LINE/L1	(6)	6167	4394	576030
11	13.2	5.7	2.7	chr11	2700004	2700038	(132386584)	+	(CTGCCG)n	Simple_repeat	1	37	(0)	576063
35	17.9	3.9	3.8	chr11	2892561	2892662	(132193960)	+	(CCT)n	Simple_repeat	1	106	(0)	576289
14	23.9	0.0	7.9	chr11	3165324	3165386	(131921236)	+	GA-rich	Low_complexity	1	63	(0)	576656
60	16.8	2.8	2.7	chr11	3231534	3231675	(131854947)	+	GA-rich	Low_complexity	1	146	(0)	576750
18	3.7	3.6	0.0	chr11	3855884	3855911	(131230711)	+	(TCTCT)n	Simple_repeat	1	29	(0)	577861
21	17.2	3.1	4.5	chr11	4393705	4393768	(130692854)	+	GA-rich	Low_complexity	1	66	(0)	578776
1269	30.0	5.8	1.5	chr11	8337692	8338171	(126748451)	+	L2a	LINE/L2	2923	3424	(2)	583852
21	6.9	0.0	0.0	chr11	9574033	9574063	(125512559)	+	(GAG)n	Simple_repeat	1	31	(0)	586107
49	0.0	0.0	0.0	chr11	12294798	12294841	(122791781)	+	(CTC)n	Simple_repeat	1	44	(0)	590569
20	20.5	1.3	6.5	chr11	16606964	16607004	(118479618)	+	(CTCCCC)n	Simple_repeat	1	75	(0)	597234
16	9.8	6.1	0.0	chr11	16607005	16607037	(118479585)	+	(CCT)n	Simple_repeat	1	35	(0)	597235
13	15.0	2.4	4.8	chr11	16607057	16607097	(118479525)	+	(CGCCCGG)n	Simple_repeat	1	42	(0)	597236
15	11.7	0.0	3.3	chr11	18105972	18106001	(116980621)	+	(CTC)n	Simple_repeat	1	30	(0)	599909
28	14.0	8.7	3.0	chr11	44310180	44310213	(90776409)	+	(CCTCTC)n	Simple_repeat	1	34	(0)	639877
35	16.1	3.5	0.0	chr11	44310214	44310330	(90776292)	+	(CT)n	Simple_repeat	1	121	(0)	639878
2429	9.8	0.0	0.9	chr11	44963667	44963981	(90122641)	C	AluSx1	SINE/Alu	(0)	312	1	641207
411	33.1	0.0	6.9	chr11	44963982	44964119	(90122503)	C	MIR3	SINE/MIR	(65)	143	15	641206
19	14.0	7.3	4.1	chr11	44964120	44964187	(90122435)	+	(CTCCTCC)n	Simple_repeat	1	73	(0)	641208
28	24.9	5.9	0.9	chr11	46120810	46120911	(88965711)	+	GA-rich	Low_complexity	1	108	(0)	643310
19	10.4	0.0	0.0	chr11	46120986	46121016	(88965606)	+	(GAG)n	Simple_repeat	1	31	(0)	643311
21	8.9	2.8	0.0	chr11	46121048	46121083	(88965539)	+	(GCT)n	Simple_repeat	1	37	(0)	643312
13	5.0	0.0	4.3	chr11	46121133	46121155	(88965467)	+	(CCT)n	Simple_repeat	1	23	(0)	643313
37	4.3	4.2	0.0	chr11	46121156	46121203	(88965419)	+	(CT)n	Simple_repeat	1	50	(0)	643314
16	21.7	0.0	0.0	chr11	46121236	46121267	(88965355)	+	G-rich	Low_complexity	1	32	(0)	643315
13	8.9	0.0	3.9	chr11	46121400	46121425	(88965197)	+	(CAG)n	Simple_repeat	1	26	(0)	643316
14	9.7	5.7	2.7	chr11	46164826	46164860	(88921762)	+	(CCTCA)n	Simple_repeat	1	37	(0)	643404
18	30.4	1.5	1.5	chr11	47376295	47376360	(87710262)	+	(AC)n	Simple_repeat	1	67	(0)	645775
52	23.6	2.7	4.7	chr11	47376502	47376689	(87709933)	+	(TCC)n	Simple_repeat	1	193	(0)	645776
373	29.0	1.1	0.0	chr11	57368605	57368697	(77717925)	C	L3	LINE/CR1	(108)	3991	3898	653550
1514	11.6	1.8	0.0	chr11	57368988	57369212	(77717410)	C	MSTC	LTR/ERVL-MaLR	(199)	229	1	653551
269	37.5	6.3	2.9	chr11	61679340	61679647	(73406975)	+	L2b	LINE/L2	3052	3370	(5)	660679
19	9.5	8.9	0.0	chr11	61679755	61679799	(73406823)	+	G-rich	Low_complexity	1	49	(0)	660680
220	30.6	2.7	0.0	chr11	61871463	61871534	(73215088)	C	L2b	LINE/L2	(271)	3104	3031	660981
199	27.6	1.7	1.7	chr11	61919453	61919511	(73167111)	C	MIRc	SINE/MIR	(129)	139	81	661072
11	17.2	3.8	7.3	chr11	62124145	62124197	(72962425)	+	G-rich	Low_complexity	1	55	(0)	661551
28	7.9	0.0	0.0	chr11	62726895	62726934	(72359688)	+	(CCT)n	Simple_repeat	1	40	(0)	662641
41	16.9	2.3	0.0	chr11	64028425	64028510	(71058112)	+	G-rich	Low_complexity	1	88	(0)	664876
12	20.2	2.9	0.0	chr11	64028674	64028707	(71057915)	+	(CCT)n	Simple_repeat	1	35	(0)	664878
14	25.6	0.0	7.2	chr11	64028708	64028716	(71057906)	+	(CCCCTC)n	Simple_repeat	49	69	(0)	664877
17	6.7	3.0	2.9	chr11	64207690	64207722	(70878900)	+	(TCCC)n	Simple_repeat	1	34	(0)	665183
245	22.9	13.6	0.0	chr11	64355701	64355770	(70730852)	C	L2a	LINE/L2	(0)	3375	3295	665459
452	28.7	7.9	7.5	chr11	64659564	64659751	(70426871)	+	MIRc	SINE/MIR	15	203	(65)	666000
282	24.5	8.9	2.9	chr11	64659868	64659972	(70426650)	+	L2b	LINE/L2	3263	3374	(1)	666001
29	21.7	1.1	5.3	chr11	65181833	65181926	(69904696)	+	GA-rich	Low_complexity	1	95	(0)	667023
513	28.2	14.3	0.6	chr11	65382621	65383056	(69703566)	+	L2b	LINE/L2	2847	3374	(1)	667450
12	15.7	2.6	5.0	chr11	65888566	65888604	(69198018)	+	G-rich	Low_complexity	1	40	(0)	668355
15	25.2	2.1	0.0	chr11	65899716	65899762	(69186860)	+	(GACG)n	Simple_repeat	1	48	(0)	668380
1047	27.1	22.4	2.9	chr11	65941215	65941618	(69145004)	C	L2	LINE/L2	(1210)	2209	1683	668492
583	25.9	15.6	1.1	chr11	65941612	65942000	(69144622)	C	L2a	LINE/L2	(134)	3292	2819	668495
299	32.3	9.8	5.3	chr11	66013922	66014210	(69072412)	+	MamGypLTR1b	LTR/Gypsy	420	735	(47)	668647
203	28.1	3.8	3.3	chr11	67379961	67380082	(67706540)	+	MIR3	SINE/MIR	31	147	(121)	671532
239	24.4	26.5	0.0	chr11	68039389	68039474	(67047148)	C	MIR	SINE/MIR	(118)	144	28	672664
12	27.2	1.8	3.5	chr11	68043464	68043520	(67043102)	+	(GGCGCT)n	Simple_repeat	1	58	(0)	672668
14	15.8	2.7	2.6	chr11	68043871	68043907	(67042715)	+	(GCA)n	Simple_repeat	1	38	(0)	672669
331	32.1	25.4	1.2	chr11	69382261	69382587	(65704035)	C	MLT1I	LTR/ERVL-MaLR	(3)	408	2	675000
185	17.9	7.1	0.0	chr11	69717304	69717342	(65369280)	C	MIR3	SINE/MIR	(48)	160	119	675570
84	7.3	6.0	7.4	chr11	69717385	69717602	(65369020)	+	(CTC)n	Simple_repeat	1	231	(0)	675571
19	26.8	3.9	1.2	chr11	69919659	69919736	(65166886)	+	(ACAC)n	Simple_repeat	1	81	(0)	675959
13	12.1	0.0	3.5	chr11	69948645	69948673	(65137949)	+	G-rich	Low_complexity	1	29	(0)	676005
295	21.6	4.6	8.1	chr11	69948899	69949034	(65137588)	C	LTR33	LTR/ERVL	(29)	486	356	676006
367	32.7	8.4	6.4	chr11	70397654	70398136	(64688486)	+	L2c	LINE/L2	2821	3316	(71)	676802
12	21.7	0.0	0.0	chr11	70398462	70398493	(64688129)	+	G-rich	Low_complexity	1	32	(0)	676805
11	27.7	0.0	0.0	chr11	70398499	70398537	(64688085)	+	(GGACCC)n	Simple_repeat	1	39	(0)	676806
444	25.9	6.0	3.9	chr11	72309457	72309637	(62776985)	C	MIRb	SINE/MIR	(12)	256	72	679715
13	14.4	3.2	0.0	chr11	72590309	72590339	(62496283)	+	(GCGCC)n	Simple_repeat	1	32	(0)	680234
345	32.5	14.0	0.8	chr11	72630582	72630848	(62455774)	C	L2b	LINE/L2	(553)	2866	2559	680298
440	24.9	9.0	1.3	chr11	74466483	74466620	(60620002)	+	MIR1_Amn	SINE/MIR	9	151	(57)	684136
230	22.5	13.8	13.1	chr11	74466718	74466864	(60619758)	C	MIR3	SINE/MIR	(88)	180	31	684137
262	26.7	8.7	2.5	chr11	75481814	75481932	(59604690)	+	MIRc	SINE/MIR	44	170	(98)	686145
240	29.0	10.9	7.1	chr11	75538290	75538642	(59547980)	C	L2-1_AMi	LINE/L2	(600)	635	268	686293
1573	26.8	10.1	4.3	chr11	75538647	75538910	(59547712)	C	L2a	LINE/L2	(1252)	2167	1901	686292
1919	14.8	0.7	3.3	chr11	75538911	75539214	(59547408)	C	AluJb	SINE/Alu	(16)	296	1	686294
382	26.3	4.0	3.2	chr11	76236788	76236977	(58849645)	C	MIR3	SINE/MIR	(22)	208	15	687583
12	18.1	4.2	1.3	chr11	77820097	77820135	(57266487)	+	GA-rich	Low_complexity	1	40	(0)	690658
276	24.5	5.4	5.4	chr11	94639815	94639926	(40446696)	+	MLT1O	LTR/ERVL-MaLR	402	513	(29)	717456
16	7.8	3.5	3.3	chr11	94639927	94639948	(40446674)	+	(AC)n	Simple_repeat	1	23	(0)	717457
2049	14.0	1.8	2.3	chr11	94639949	94640291	(40446331)	+	MER61A	LTR/ERV1	1	341	(0)	717458
21	22.7	4.1	4.8	chr11	102452775	102452889	(32633733)	+	G-rich	Low_complexity	1	114	(0)	727947
38	4.8	0.0	0.0	chr11	111913202	111913245	(23173377)	+	(CCT)n	Simple_repeat	1	44	(0)	742184
13	20.2	6.7	3.1	chr11	111913391	111913450	(23173172)	+	(CCTGCCT)n	Simple_repeat	1	64	(0)	742185
647	20.5	0.9	0.0	chr11	113549683	113549794	(21536828)	+	MER81	DNA/hAT-Blackjack	2	114	(0)	744746
33	11.6	1.8	0.0	chr11	114251741	114251796	(20834826)	+	(GGA)n	Simple_repeat	1	57	(0)	745971
488	35.0	3.7	0.0	chr11	114440037	114440216	(20646406)	C	MIR3	SINE/MIR	(7)	201	15	746276
17	24.0	3.0	2.9	chr11	117907304	117907370	(17179252)	+	(GGCGT)n	Simple_repeat	1	69	(0)	751947
504	24.8	4.3	0.1	chr11	118035347	118035478	(17051144)	C	L2a	LINE/L2	(8)	3418	3228	752188
2235	10.2	0.3	1.0	chr11	118035884	118036186	(17050436)	C	AluSx1	SINE/Alu	(11)	301	1	752189
28	0.0	0.0	0.0	chr11	119018676	119018701	(16067921)	+	(GGA)n	Simple_repeat	1	26	(0)	754099
37	7.2	3.5	0.0	chr11	120138150	120138207	(14948415)	+	(GAG)n	Simple_repeat	1	60	(0)	756022
25	26.6	2.0	3.0	chr11	123741912	123742010	(11344612)	+	(TTTTCT)n	Simple_repeat	1	101	(0)	762085
12	26.6	1.9	3.6	chr11	126367320	126367373	(8719249)	+	(GGCAGT)n	Simple_repeat	1	55	(0)	765982
8645	17.1	9.0	3.4	chr12	1566426	1567180	(131708129)	+	L1MCa	LINE/L1	2	823	(5685)	780886
464	23.4	8.7	3.5	chr12	1925653	1925825	(131349484)	+	MIR3	SINE/MIR	15	197	(11)	781439
210	19.0	0.7	0.7	chr12	1929717	1930129	(131345180)	+	GA-rich	Low_complexity	1	416	(0)	781446
238	37.6	2.6	2.0	chr12	1930367	1930518	(131344791)	C	L2b	LINE/L2	(11)	3364	3212	781447
1071	13.6	1.3	0.0	chr12	1931506	1931660	(131343649)	+	AluJo	SINE/Alu	136	292	(20)	781450
331	30.5	16.7	3.1	chr12	2193672	2193965	(131081344)	C	L3	LINE/CR1	(58)	4041	3700	781840
136	23.5	0.9	0.9	chr12	2194096	2194426	(131080883)	+	(CCT)n	Simple_repeat	1	334	(0)	781841
16	5.3	0.0	0.0	chr12	6171372	6171391	(127103918)	+	(G)n	Simple_repeat	1	20	(0)	788167
15	0.0	0.0	10.0	chr12	6171603	6171632	(127103677)	+	(GGA)n	Simple_repeat	1	30	(0)	788168
30	0.0	0.0	0.0	chr12	6635958	6635986	(126639323)	+	(CTGGG)n	Simple_repeat	1	29	(0)	789082
34	19.1	1.3	1.2	chr12	6821734	6821812	(126453497)	+	G-rich	Low_complexity	1	80	(0)	789474
12	12.3	5.1	4.9	chr12	12562720	12562758	(120712551)	+	G-rich	Low_complexity	1	41	(0)	798343
23	11.5	0.0	0.0	chr12	12562926	12562963	(120712346)	+	(CCT)n	Simple_repeat	1	38	(0)	798344
13	20.4	0.0	7.7	chr12	12562962	12563013	(120712296)	+	(CCCGCG)n	Simple_repeat	1	52	(0)	798345
18	0.0	4.0	0.0	chr12	19130684	19130708	(114144601)	+	(AGG)n	Simple_repeat	1	26	(0)	807588
25	22.0	1.4	2.7	chr12	19439621	19439692	(113835617)	+	GA-rich	Low_complexity	1	73	(0)	808199
248	31.2	11.1	3.5	chr12	33438712	33438827	(99836482)	+	MIRc	SINE/MIR	115	240	(28)	829056
12	25.7	0.0	0.0	chr12	47740088	47740124	(85535185)	+	(GCCGA)n	Simple_repeat	1	37	(0)	844123
12	15.3	2.4	7.0	chr12	47745205	47745246	(85530063)	+	(CTC)n	Simple_repeat	1	43	(0)	844132
32	3.2	0.0	0.0	chr12	47773810	47773841	(85501468)	+	(AC)n	Simple_repeat	1	32	(0)	844182
37	8.0	0.0	0.0	chr12	47904085	47904137	(85371172)	+	(GAG)n	Simple_repeat	1	53	(0)	844399
31	25.4	2.9	4.9	chr12	48815413	48815551	(84459758)	+	GA-rich	Low_complexity	1	143	(0)	845854
90	2.3	0.0	0.0	chr12	49264788	49264876	(84010433)	+	(CCCTTCCTC)n	Simple_repeat	1	89	(0)	846829
15	8.3	7.1	4.4	chr12	49673750	49673791	(83601518)	+	(CCAGC)n	Simple_repeat	1	45	(0)	847574
13	13.9	6.1	0.0	chr12	49968010	49968042	(83307267)	+	(CTCCCT)n	Simple_repeat	1	35	(0)	848161
260	32.5	4.8	0.8	chr12	49968186	49968306	(83307003)	+	MIRc	SINE/MIR	100	225	(43)	848162
15	8.1	9.8	2.2	chr12	49968355	49968395	(83306914)	+	(CCTTCC)n	Simple_repeat	1	45	(0)	848163
204	29.0	13.1	0.0	chr12	51868751	51868843	(81406466)	C	MIRb	SINE/MIR	(75)	193	87	852041
13	22.8	7.1	0.0	chr12	51868882	51868937	(81406372)	+	(TCCTGCC)n	Simple_repeat	1	60	(0)	852042
33	2.9	0.0	0.0	chr12	53200180	53200214	(80075095)	+	(CACATA)n	Simple_repeat	1	35	(0)	854245
113	0.0	0.0	0.0	chr12	53498909	53499004	(79776305)	+	(TG)n	Simple_repeat	1	96	(0)	854870
24	16.6	3.7	0.0	chr12	53499492	53499545	(79775764)	+	(CCT)n	Simple_repeat	1	56	(0)	854871
17	28.8	5.8	4.3	chr12	54199935	54200075	(79075234)	+	GA-rich	Low_complexity	14	155	(0)	856032
197	30.3	3.9	4.8	chr12	54200294	54200397	(79074912)	C	MIRb	SINE/MIR	(52)	216	114	856033
926	26.7	9.0	2.4	chr12	57160172	57160751	(76114558)	+	L2a	LINE/L2	2794	3426	(0)	860799
2061	11.3	3.4	0.0	chr12	57174493	57174775	(76100534)	+	AluSz	SINE/Alu	1	293	(19)	860821
14	17.0	6.2	2.0	chr12	74170973	74171020	(59104289)	+	(CGTCCTC)n	Simple_repeat	1	51	(0)	885889
23	30.3	4.6	0.9	chr12	75390913	75391020	(57884289)	+	(CCTCTCC)n	Simple_repeat	1	113	(0)	887474
20	22.1	0.0	4.8	chr12	99984569	99984631	(33290678)	+	GA-rich	Low_complexity	1	63	(0)	924662
187	19.4	6.5	2.7	chr12	108341818	108342412	(24932897)	+	GA-rich	Low_complexity	1	634	(0)	940069
20	15.8	5.9	1.9	chr12	108597822	108597872	(24677437)	+	(CA)n	Simple_repeat	1	54	(0)	940624
23	6.7	8.5	0.0	chr12	108598091	108598137	(24677172)	+	(CCTCCCT)n	Simple_repeat	1	51	(0)	940625
746	28.5	4.0	3.0	chr12	110859044	110859311	(22415998)	C	MLT1I	LTR/ERVL-MaLR	(2)	409	139	945736
57	1.9	0.0	0.0	chr12	111429016	111429070	(21846239)	+	(GAG)n	Simple_repeat	1	55	(0)	947085
337	31.3	11.0	0.8	chr12	111429085	111429276	(21846033)	+	MIR	SINE/MIR	36	246	(22)	947086
285	27.8	2.3	4.4	chr12	112573865	112575083	(20700226)	+	GA-rich	Low_complexity	1	1247	(0)	949581
401	36.7	2.2	4.3	chr12	113196805	113196989	(20078320)	C	MIRb	SINE/MIR	(6)	262	82	951029
215	23.9	0.0	0.0	chr12	113196984	113197029	(20078280)	+	L2a	LINE/L2	3381	3426	(0)	951030
13	23.3	0.0	2.4	chr12	113221664	113221705	(20053604)	+	G-rich	Low_complexity	1	42	(0)	951099
522	19.1	6.4	2.2	chr12	113222083	113222216	(20053093)	+	MIR3	SINE/MIR	17	156	(52)	951100
190	32.4	11.0	3.7	chr12	113666435	113666632	(19608677)	+	MIRc	SINE/MIR	22	235	(33)	952172
203	28.3	0.0	0.0	chr12	113721243	113721295	(19554014)	C	MIRb	SINE/MIR	(8)	260	208	952321
258	37.8	1.8	1.8	chr12	117042744	117042856	(16232453)	+	L1MC5	LINE/L1	7060	7173	(2131)	959437
901	5.5	7.9	0.0	chr12	117042857	117042984	(16232325)	+	MER85	DNA/PiggyBac	1	139	(0)	959438
14	11.5	0.0	3.3	chr12	121452791	121452820	(11822489)	+	(GAAG)n	Simple_repeat	1	30	(0)	969409
13	15.0	3.3	0.0	chr12	121800893	121800922	(11474387)	+	GA-rich	Low_complexity	1	31	(0)	970350
14	19.4	6.4	0.0	chr12	121800944	121800990	(11474319)	+	(CAGCC)n	Simple_repeat	1	50	(0)	970351
32	4.2	3.9	1.9	chr12	121803919	121803978	(11471331)	+	(GAG)n	Simple_repeat	1	61	(0)	970353
30	20.6	0.0	0.0	chr12	121804065	121804131	(11471178)	+	(GGCAGC)n	Simple_repeat	1	67	(0)	970354
23	9.4	0.0	7.5	chr12	122226368	122226420	(11048889)	+	(GGCGG)n	Simple_repeat	1	53	(0)	971354
269	32.8	9.1	5.3	chr12	123149565	123149754	(10125555)	C	L2c	LINE/L2	(42)	3345	3148	973408
21	20.4	0.0	0.0	chr12	123436354	123436401	(9838908)	+	(CCT)n	Simple_repeat	1	48	(0)	974082
661	21.1	2.7	0.7	chr12	123602485	123602627	(9672682)	+	MIR	SINE/MIR	46	191	(71)	974523
13	17.5	0.0	2.9	chr12	124606077	124606110	(8669199)	+	GA-rich	Low_complexity	1	34	(0)	976388
1799	23.6	5.8	0.7	chr12	124606337	124606779	(8668530)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	976389
286	30.0	6.2	6.7	chr12	124632367	124632559	(8642750)	+	MIR	SINE/MIR	34	225	(37)	976446
1520	29.4	7.8	2.9	chr12	124853936	124855113	(8420196)	C	L2a	LINE/L2	(3)	3423	2137	976980
23	10.5	3.6	3.5	chr12	125186267	125186314	(8088995)	+	(GCCCCG)n	Simple_repeat	1	48	(0)	977731
44	2.1	2.1	0.0	chr12	125186315	125186362	(8088947)	+	(CTC)n	Simple_repeat	1	49	(0)	977732
21	9.4	0.0	0.0	chr12	125186369	125186402	(8088907)	+	(CGCT)n	Simple_repeat	1	34	(0)	977733
36	24.0	2.7	1.8	chr12	125186406	125186516	(8088793)	+	(GGC)n	Simple_repeat	1	114	(0)	977734
11	21.5	6.0	1.9	chr12	125495243	125495292	(7780017)	+	(CCTCCTC)n	Simple_repeat	1	53	(0)	978306
455	26.6	5.3	10.0	chr12	125495322	125495542	(7779767)	+	LTR33	LTR/ERVL	212	418	(102)	978307
267	23.3	1.1	7.5	chr12	130870602	130870694	(2404615)	C	L1ME3Cz	LINE/L1	(576)	421	335	987383
295	27.9	16.1	0.9	chr12	131045639	131045743	(2229566)	C	MIRb	SINE/MIR	(122)	146	23	987671
238	13.0	13.8	0.0	chr12	131229763	131229831	(2045478)	+	MER53	DNA/hAT	17	96	(97)	987881
118	10.5	3.6	0.0	chr12	131231753	131231948	(2043361)	+	(CTC)n	Simple_repeat	1	203	(0)	987884
464	32.4	0.6	6.4	chr12	131231983	131232170	(2043139)	+	MIR3	SINE/MIR	27	203	(5)	987885
676	25.7	4.5	0.0	chr12	131232175	131232384	(2042925)	C	MER113	DNA/hAT-Charlie	(73)	448	229	987886
550	34.9	1.0	0.0	chr12	131413113	131413304	(1862005)	+	MIR	SINE/MIR	8	201	(61)	988084
46	18.3	3.7	4.3	chr12	131421989	131422124	(1853185)	+	(CTC)n	Simple_repeat	1	141	(0)	988095
78	19.5	2.4	0.0	chr12	131432516	131432682	(1842627)	+	GA-rich	Low_complexity	1	171	(0)	988113
382	30.3	3.6	0.0	chr12	131432747	131432878	(1842431)	+	MER58B	DNA/hAT-Charlie	202	338	(3)	988114
14	9.7	5.7	2.7	chr12	131860791	131860825	(1414484)	+	G-rich	Low_complexity	1	37	(0)	988709
18	9.7	3.0	0.0	chr12	131929829	131929861	(1345448)	+	(GCCCA)n	Simple_repeat	1	34	(0)	988831
11	24.2	5.5	1.7	chr12	132632539	132632593	(642716)	+	G-rich	Low_complexity	1	58	(0)	989693
1303	21.3	15.1	0.8	chr13	21297000	21297397	(93066931)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	1	995869
35	2.8	0.0	0.0	chr13	22926403	22926439	(91437889)	+	(GGGGGT)n	Simple_repeat	1	37	(0)	998110
31	19.1	3.9	0.0	chr13	26254168	26254244	(88110084)	+	(TGAG)n	Simple_repeat	1	80	(0)	1002972
27	19.2	5.1	1.2	chr13	32586968	32587046	(81777282)	+	(GCCGCC)n	Simple_repeat	1	83	(0)	1013055
15	23.9	4.3	6.1	chr13	32587131	32587224	(81777104)	+	G-rich	Low_complexity	1	98	(0)	1013056
593	10.7	0.0	4.8	chr13	45123008	45123091	(69241237)	+	AluSz6	SINE/Alu	215	294	(18)	1031633
1671	13.0	0.4	0.4	chr13	45123093	45123331	(69240997)	+	7SK	RNA	1	239	(92)	1031634
2145	14.9	0.0	0.7	chr13	45123346	45123647	(69240681)	+	AluJr	SINE/Alu	1	300	(12)	1031635
768	25.2	6.2	2.8	chr13	46796212	46796427	(67567901)	+	MIR	SINE/MIR	9	232	(30)	1034438
27	16.1	0.0	3.4	chr13	48303940	48303998	(66060330)	+	(GCC)n	Simple_repeat	1	59	(0)	1036634
35	5.4	0.0	0.0	chr13	75480868	75480906	(38883422)	+	(CA)n	Simple_repeat	1	39	(0)	1073408
4421	25.4	3.9	2.5	chr13	90658227	90659643	(23704685)	+	L1PA12	LINE/L1	9	2484	(5119)	1093212
3101	24.5	2.5	6.0	chr13	90699878	90700721	(23663607)	+	MLT1A0-int	LTR/ERVL-MaLR	360	1172	(563)	1093256
35	24.4	0.0	0.0	chr13	91398651	91398731	(22965597)	+	(GGC)n	Simple_repeat	1	81	(0)	1094195
21	3.6	0.0	0.0	chr13	91719062	91719090	(22645238)	+	(ATTT)n	Simple_repeat	1	29	(0)	1094656
238	39.0	0.0	0.0	chr13	91719336	91719417	(22644911)	+	L2a	LINE/L2	194	275	(3144)	1094657
241	33.7	1.0	1.0	chr13	91719472	91719570	(22644758)	+	L2a	LINE/L2	924	1022	(2397)	1094657
291	25.6	14.7	10.3	chr13	99132084	99132363	(15231965)	+	L1MEj	LINE/L1	593	888	(1272)	1105756
427	17.4	0.0	3.9	chr13	99132747	99132848	(15231480)	C	L1MDa	LINE/L1	(5083)	1550	1453	1105759
610	31.0	8.1	2.8	chr13	99311079	99311403	(15052925)	C	L2a	LINE/L2	(0)	3426	3083	1106066
1190	20.3	5.7	2.6	chr13	99427699	99428037	(14936291)	C	L1MB8	LINE/L1	(33)	6145	5796	1106221
14	14.2	0.0	5.7	chr13	99981891	99981925	(14382403)	+	(GGC)n	Simple_repeat	1	35	(0)	1107140
14	12.7	0.0	0.0	chr13	99982137	99982162	(14382166)	+	(GCG)n	Simple_repeat	1	26	(0)	1107141
11	31.8	1.7	1.6	chr13	99982305	99982364	(14381964)	+	(GGCCCC)n	Simple_repeat	1	61	(0)	1107142
34	14.9	6.5	2.0	chr13	112689876	112689968	(1674360)	+	G-rich	Low_complexity	1	99	(0)	1123838
11	16.8	0.0	10.2	chr13	112690357	112690405	(1673923)	+	G-rich	Low_complexity	1	49	(0)	1123839
15	26.3	5.5	3.1	chr13	113584448	113584538	(779790)	+	(CGCACG)n	Simple_repeat	1	96	(0)	1124892
16	21.4	2.3	0.0	chr13	113584581	113584623	(779705)	+	GA-rich	Low_complexity	1	44	(0)	1124893
446	28.3	8.1	0.0	chr13	113748484	113748705	(615623)	+	Tigger3	DNA/TcMar-Tigger	2756	2968	(61)	1124985
331	18.7	2.6	2.5	chr13	113836170	113836951	(527377)	+	GA-rich	Low_complexity	1	802	(0)	1125051
812	23.1	11.0	0.0	chr13	113949477	113949736	(414592)	+	MER34B	LTR/ERV1	16	307	(258)	1125156
13	15.8	4.2	6.0	chr14	23155361	23155408	(83888310)	+	(CCTT)n	Simple_repeat	1	50	(0)	1132376
12	13.9	6.2	0.0	chr14	23551460	23551491	(83492227)	+	(CCCT)n	Simple_repeat	1	34	(0)	1133022
49	3.0	2.7	4.0	chr14	23551653	23551726	(83491992)	+	(CCT)n	Simple_repeat	1	76	(0)	1133023
311	32.4	11.9	3.7	chr14	24331551	24331765	(82711953)	C	MIR	SINE/MIR	(7)	255	21	1134086
21	6.5	0.0	2.9	chr14	54567028	54567061	(52476657)	+	(GGA)n	Simple_repeat	1	34	(0)	1176155
27	14.2	6.5	0.0	chr14	60165237	60165298	(46878420)	+	(AGC)n	Simple_repeat	1	66	(0)	1184649
20	17.4	0.0	0.0	chr14	64823320	64823359	(42220359)	+	(GCA)n	Simple_repeat	1	40	(0)	1191944
21	16.4	3.5	3.3	chr14	69152986	69153043	(37890675)	+	(CCG)n	Simple_repeat	1	60	(0)	1198957
218	25.3	12.0	2.1	chr14	72699770	72699866	(34343852)	C	L2	LINE/L2	(1328)	2091	1984	1204653
17	8.8	5.3	2.5	chr14	73026877	73026914	(34016804)	+	(GCCCT)n	Simple_repeat	1	40	(0)	1205315
461	24.8	22.6	2.7	chr14	75454712	75455099	(31588619)	C	L2b	LINE/L2	(294)	3081	2593	1210494
402	12.1	9.0	5.2	chr14	75455161	75455256	(31588462)	C	MER5A1	DNA/hAT-Charlie	(53)	113	14	1210495
1051	24.4	8.1	4.0	chr14	75455438	75455817	(31587901)	+	LTR33	LTR/ERVL	18	414	(101)	1210496
132	16.6	1.1	6.5	chr14	76922141	76922490	(30121228)	+	G-rich	Low_complexity	1	354	(0)	1213210
26	27.6	4.9	1.6	chr14	76922647	76922768	(30120950)	+	(TCTCTC)n	Simple_repeat	1	128	(0)	1213211
7517	18.6	7.1	3.1	chr14	81169670	81171382	(25872336)	+	L1P4a	LINE/L1	23	1809	(4694)	1220221
1069	20.2	10.0	0.0	chr14	91265581	91265833	(15777885)	+	MER63D	DNA/hAT-Blackjack	7	287	(774)	1235431
218	27.9	11.9	5.5	chr14	93110938	93111001	(13932717)	+	MIRb	SINE/MIR	99	172	(96)	1238810
54	0.0	0.0	4.8	chr14	93111002	93111063	(13932655)	+	(CCTCATC)n	Simple_repeat	1	62	(0)	1238811
218	28.1	10.5	4.8	chr14	93111064	93111114	(13932604)	+	MIRb	SINE/MIR	173	229	(39)	1238810
33	10.7	0.0	11.8	chr14	95686257	95686385	(11357333)	+	(TCCCCCC)n	Simple_repeat	1	113	(0)	1243517
37	0.0	0.0	4.7	chr14	96100459	96100501	(10943217)	+	(CCCTCCT)n	Simple_repeat	1	43	(0)	1244242
388	24.7	3.7	1.1	chr14	100522674	100522795	(6520923)	C	MIR	SINE/MIR	(107)	161	45	1252005
15	27.1	2.3	0.0	chr14	100725941	100725984	(6317734)	+	(GT)n	Simple_repeat	1	45	(0)	1252314
188	35.7	8.5	0.0	chr14	101360725	101360853	(5682865)	+	MIR1_Amn	SINE/MIR	2	142	(88)	1253041
1672	22.7	7.5	5.8	chr14	103136806	103137010	(3906708)	C	MLT1D	LTR/ERVL-MaLR	(314)	191	1	1256253
385	33.2	9.0	0.5	chr14	103378462	103378664	(3665054)	C	MIRb	SINE/MIR	(45)	223	2	1256693
2461	7.8	0.0	0.0	chr14	103633062	103633356	(3410362)	C	AluSc8	SINE/Alu	(16)	295	1	1257202
194	18.9	17.2	3.6	chr14	103633610	103633664	(3410054)	+	L2a	LINE/L2	2791	2854	(565)	1257203
561	24.5	12.3	9.5	chr14	103633771	103633857	(3409861)	+	L2a	LINE/L2	3176	3263	(163)	1257203
22	16.2	2.0	2.0	chr14	104677815	104677864	(2365854)	+	(CCT)n	Simple_repeat	1	51	(0)	1258705
247	27.6	9.9	0.3	chr14	104729576	104729938	(2313780)	C	TAR1	Satellite/telo	(561)	1550	1149	1258758
422	25.2	0.9	0.9	chr15	27250297	27250404	(74740785)	C	MER3	DNA/hAT-Charlie	(24)	185	78	1272419
3481	18.6	2.8	3.1	chr15	28957379	28957671	(73033518)	C	L1MB3	LINE/L1	(509)	5674	5380	1274789
520	21.8	1.0	0.0	chr15	28958077	28958177	(73033012)	+	MLT1I	LTR/ERVL-MaLR	47	148	(263)	1274791
4553	23.7	7.5	3.5	chr15	32130782	32132470	(69858719)	C	L1MD2	LINE/L1	(4585)	2048	59	1279442
400	31.5	7.2	1.8	chr15	40097545	40097715	(61893474)	+	MIRb	SINE/MIR	35	215	(53)	1290680
26	26.8	2.5	4.1	chr15	41558999	41559118	(60432071)	+	(GCGGCG)n	Simple_repeat	1	123	(0)	1293644
17	17.8	1.7	6.8	chr15	41559164	41559221	(60431968)	+	(CCT)n	Simple_repeat	1	59	(0)	1293645
18	35.7	1.0	2.0	chr15	41559281	41559379	(60431810)	+	(GCC)n	Simple_repeat	1	100	(0)	1293646
2297	9.6	0.3	0.0	chr15	50766224	50766525	(51224664)	+	AluSc8	SINE/Alu	1	303	(8)	1308474
339	30.3	15.2	2.6	chr15	50766526	50766821	(51224368)	+	L2a	LINE/L2	2882	3211	(215)	1308473
2522	7.7	0.3	0.0	chr15	50766822	50767131	(51224058)	C	AluSp	SINE/Alu	(2)	311	1	1308475
14	14.8	1.9	9.1	chr15	52568729	52568782	(49422407)	+	(GCCTCG)n	Simple_repeat	1	55	(0)	1311518
30	15.3	1.7	0.0	chr15	55993613	55993670	(45997519)	+	GA-rich	Low_complexity	1	59	(0)	1316534
33	24.8	3.5	2.5	chr15	57323971	57324084	(44667105)	+	GA-rich	Low_complexity	1	118	(0)	1318503
13	5.3	0.0	0.0	chr15	58772051	58772070	(43219119)	+	(AGG)n	Simple_repeat	1	20	(0)	1320769
18	22.5	2.5	6.0	chr15	63504926	63505006	(38486183)	+	G-rich	Low_complexity	1	83	(0)	1328723
17	24.9	2.0	0.0	chr15	65638801	65638850	(36352339)	+	G-rich	Low_complexity	1	51	(0)	1333046
461	28.9	9.6	0.0	chr15	65639052	65639231	(36351958)	+	MIRc	SINE/MIR	46	244	(24)	1333047
14	27.6	2.0	0.0	chr15	65639242	65639290	(36351899)	+	(GTGT)n	Simple_repeat	1	50	(0)	1333048
12	17.2	2.2	6.5	chr15	65792134	65792178	(36199011)	+	(CCCG)n	Simple_repeat	1	46	(0)	1333344
13	21.9	0.0	2.6	chr15	65792225	65792263	(36198926)	+	(GCCTCT)n	Simple_repeat	1	39	(0)	1333345
332	24.8	8.0	8.0	chr15	65792875	65793036	(36198153)	+	MIR	SINE/MIR	101	262	(0)	1333346
888	18.8	8.8	0.0	chr15	67091799	67092006	(34899183)	C	LTR33A_	LTR/ERVL	(0)	531	304	1336060
729	26.4	4.5	1.7	chr15	67092029	67092263	(34898926)	C	LTR33A_	LTR/ERVL	(289)	242	1	1336060
822	22.0	2.1	1.1	chr15	67092408	67092591	(34898598)	+	MER5A	DNA/hAT-Charlie	1	186	(3)	1336061
228	29.7	1.3	0.0	chr15	67411337	67411410	(34579779)	+	MIR3	SINE/MIR	119	193	(15)	1336559
911	8.8	0.0	5.1	chr15	72237723	72237878	(29753311)	+	L1MA3	LINE/L1	6158	6305	(0)	1345118
210	36.4	4.8	0.0	chr15	72376328	72376445	(29614744)	C	L2c	LINE/L2	(233)	3154	3031	1345344
25	21.0	0.0	1.6	chr15	73633270	73633331	(28357858)	+	G-rich	Low_complexity	1	62	(0)	1347427
366	35.4	0.8	0.8	chr15	74390961	74391091	(27600098)	+	MIR	SINE/MIR	72	202	(60)	1348756
211	25.8	0.0	6.1	chr15	74391177	74391242	(27599947)	+	AmnSINE1	SINE/5S-Deu-L2	81	142	(433)	1348757
14	15.3	5.4	0.0	chr15	74408481	74408517	(27582672)	+	G-rich	Low_complexity	1	39	(0)	1348785
12	10.3	6.1	2.9	chr15	74610266	74610298	(27380891)	+	(CCACC)n	Simple_repeat	1	35	(0)	1349179
11	13.0	8.8	0.0	chr15	75348666	75348699	(26642490)	+	(CCAGCTC)n	Simple_repeat	1	37	(0)	1350629
184	29.8	1.7	0.0	chr15	75348789	75348845	(26642344)	+	MIRb	SINE/MIR	119	176	(92)	1350630
17	26.4	0.0	0.0	chr15	75647818	75647867	(26343322)	+	(CTCCTCC)n	Simple_repeat	1	50	(0)	1351301
12	11.6	3.3	3.2	chr15	75648019	75648048	(26343141)	+	(GGAC)n	Simple_repeat	1	31	(0)	1351302
2023	24.8	6.9	1.5	chr15	77627984	77628695	(24362494)	+	L1ME3F	LINE/L1	5416	6168	(75)	1354374
23	26.5	1.3	1.3	chr15	77632810	77632887	(24358302)	+	(CCGCTC)n	Simple_repeat	1	79	(0)	1354379
22	20.6	6.9	2.1	chr15	77632902	77632988	(24358201)	+	(GAGC)n	Simple_repeat	1	93	(0)	1354380
17	3.3	9.7	0.0	chr15	77633008	77633038	(24358151)	+	(TGG)n	Simple_repeat	1	34	(0)	1354381
848	31.8	17.4	1.4	chr15	77713783	77714545	(24276644)	+	L2a	LINE/L2	2092	3001	(418)	1354520
214	25.7	2.1	0.0	chr15	77714640	77714699	(24276490)	+	L2a	LINE/L2	3314	3426	(0)	1354520
38	20.4	1.1	3.1	chr15	77737402	77737496	(24253693)	+	G-rich	Low_complexity	1	96	(0)	1354568
346	25.7	10.8	4.5	chr15	77737501	77737810	(24253379)	+	L2a	LINE/L2	631	962	(1134)	1354569
585	27.8	20.6	2.3	chr15	77737811	77738747	(24252442)	+	L2a	LINE/L2	2195	3414	(12)	1354569
469	25.3	3.6	4.8	chr15	77746903	77747068	(24244121)	C	MIR3	SINE/MIR	(26)	182	19	1354584
18	8.3	4.8	4.5	chr15	82045086	82045127	(19946062)	+	(TCC)n	Simple_repeat	1	44	(0)	1362233
248	36.4	7.7	0.8	chr15	88788123	88788255	(13202934)	C	L2c	LINE/L2	(159)	3228	3086	1373020
306	22.2	16.8	0.0	chr15	89004065	89004163	(12987026)	+	MLT2C1	LTR/ERVL	396	514	(49)	1373435
29	13.2	7.5	2.3	chr15	89004576	89004655	(12986534)	+	(CTTCC)n	Simple_repeat	1	86	(0)	1373436
304	28.0	6.2	0.6	chr15	89227034	89227202	(12763987)	C	MIR3	SINE/MIR	(14)	254	70	1373874
14	21.7	0.0	2.6	chr15	89395556	89395594	(12595595)	+	(TCC)n	Simple_repeat	1	39	(0)	1374136
197	21.6	1.9	1.9	chr15	89768310	89768361	(12222828)	C	MIR3	SINE/MIR	(24)	184	133	1374841
228	28.3	16.5	0.9	chr15	89768396	89768502	(12222687)	C	L3	LINE/CR1	(78)	4021	3895	1374842
500	28.2	14.7	5.1	chr15	90588333	90588608	(11402581)	C	MLT1I	LTR/ERVL-MaLR	(17)	394	88	1376681
257	24.9	12.4	2.3	chr15	90588867	90589013	(11402176)	C	MIR	SINE/MIR	(45)	223	33	1376682
273	31.9	2.1	1.1	chr15	90646773	90646867	(11344322)	+	L2c	LINE/L2	3273	3368	(19)	1376774
2367	10.5	0.0	0.0	chr15	90854006	90854310	(11136879)	+	AluSx	SINE/Alu	1	305	(7)	1377250
50	0.0	0.0	0.0	chr15	90854557	90854599	(11136590)	+	(CA)n	Simple_repeat	1	43	(0)	1377251
508	34.5	1.4	0.0	chr15	90854875	90855019	(11136170)	C	MIRb	SINE/MIR	(21)	247	101	1377252
523	31.8	4.0	7.7	chr15	90870700	90870958	(11120231)	+	MIRb	SINE/MIR	3	251	(17)	1377285
12	21.1	6.2	5.9	chr15	90871296	90871375	(11119814)	+	G-rich	Low_complexity	1	85	(0)	1377286
333	29.1	3.8	7.4	chr15	91296292	91296454	(10694735)	C	MLT1J	LTR/ERVL-MaLR	(9)	503	347	1378061
40	8.1	1.5	1.5	chr15	96331535	96331601	(5659588)	+	(CTC)n	Simple_repeat	1	68	(0)	1385729
13	12.8	2.6	5.1	chr16	91360	91397	(90246948)	+	(AATAA)n	Simple_repeat	1	39	(0)	1394155
1480	18.6	9.7	0.3	chr16	405595	405949	(89932396)	C	LTR47B	LTR/ERVL	(26)	417	26	1394703
28	17.8	0.0	0.0	chr16	547208	547264	(89791081)	+	GA-rich	Low_complexity	1	57	(0)	1394954
219	31.6	3.9	0.0	chr16	566783	566880	(89771465)	C	L2c	LINE/L2	(275)	3112	3011	1394964
243	23.5	0.0	0.0	chr16	622167	622217	(89716128)	+	L1ME4b	LINE/L1	355	405	(487)	1395028
2305	8.4	0.7	0.0	chr16	622508	622803	(89715542)	C	AluSc	SINE/Alu	(11)	298	1	1395029
257	34.7	8.0	6.7	chr16	708286	708631	(89629714)	+	L2b	LINE/L2	3023	3373	(2)	1395103
291	19.8	12.5	1.1	chr16	1376571	1376662	(88961683)	C	MLT1B	LTR/ERVL-MaLR	(200)	190	87	1395807
267	26.3	19.9	0.0	chr16	1707642	1707774	(88630571)	+	MIR3	SINE/MIR	40	205	(3)	1396285
13	14.2	3.2	0.0	chr16	1984505	1984535	(88353810)	+	(CCCCGC)n	Simple_repeat	1	32	(0)	1396746
20	27.1	2.7	2.6	chr16	3611596	3611669	(86726676)	+	(CG)n	Simple_repeat	1	76	(0)	1399484
22	24.8	1.9	6.4	chr16	4315795	4315827	(86022518)	+	(CCCCCCT)n	Simple_repeat	15	110	(0)	1400931
18	14.9	0.0	2.6	chr16	4315896	4315934	(86022411)	+	G-rich	Low_complexity	1	39	(0)	1400933
23	17.8	7.1	4.8	chr16	4315935	4315948	(86022397)	+	(CCTC)n	Simple_repeat	1	41	(64)	1400934
18	26.0	0.0	4.6	chr16	4315949	4316013	(86022332)	+	(CCT)n	Simple_repeat	1	65	(0)	1400935
23	17.8	7.1	4.8	chr16	4316014	4316032	(86022313)	+	(CCTC)n	Simple_repeat	42	105	(0)	1400934
12	19.1	2.6	2.6	chr16	4316102	4316139	(86022206)	+	G-rich	Low_complexity	1	39	(0)	1400936
24	19.1	4.3	7.4	chr16	4316132	4316248	(86022097)	+	(CCCGCGC)n	Simple_repeat	1	122	(0)	1400937
23	30.0	0.0	0.0	chr16	4316407	4316479	(86021866)	+	(CGCT)n	Simple_repeat	1	73	(0)	1400938
1817	11.9	4.5	0.7	chr16	4402268	4402544	(85935801)	C	AluJb	SINE/Alu	(24)	288	1	1401072
120	4.1	0.0	0.0	chr16	8660781	8660907	(81677438)	+	(GGA)n	Simple_repeat	1	127	(0)	1409531
18	29.8	1.3	2.6	chr16	9091996	9092072	(81246273)	+	GA-rich	Low_complexity	1	78	(0)	1410575
87	21.3	2.3	4.2	chr16	11515565	11515822	(78822523)	+	GA-rich	Low_complexity	1	264	(0)	1415867
71	4.1	0.0	0.0	chr16	11515846	11515922	(78822423)	+	(GCCCA)n	Simple_repeat	1	77	(0)	1415868
227	31.4	2.4	1.6	chr16	11681873	11681995	(78656350)	C	HAL1b	LINE/L1	(18)	2403	2280	1416288
376	24.5	16.4	3.2	chr16	15897829	15897998	(74440347)	C	MIRb	SINE/MIR	(64)	204	6	1425512
67	22.5	2.2	4.8	chr16	15898035	15898063	(74440282)	+	(CTCCTC)n	Simple_repeat	1	147	(83)	1425513
22	42.9	1.1	2.8	chr16	15898067	15898243	(74440102)	+	(TCT)n	Simple_repeat	1	179	(0)	1425514
67	22.5	2.2	4.8	chr16	15898246	15898259	(74440086)	+	(CTCCTC)n	Simple_repeat	148	230	(0)	1425513
2219	12.3	0.0	0.3	chr16	15898352	15898660	(74439685)	C	AluSz	SINE/Alu	(4)	308	1	1425515
280	30.8	0.5	1.6	chr16	16003688	16003983	(74334362)	+	(ATGG)n	Simple_repeat	1	292	(0)	1425825
26	7.7	3.4	3.3	chr16	16003985	16004043	(74334302)	+	(TGGA)n	Simple_repeat	1	61	(0)	1425826
206	22.4	10.1	7.0	chr16	16004158	16004272	(74334073)	C	L2c	LINE/L2	(617)	2802	2684	1425816
456	30.7	7.2	4.2	chr16	21084060	21084273	(69254072)	+	MIRb	SINE/MIR	33	253	(15)	1437117
20	23.8	1.4	4.0	chr16	28554226	28554299	(61784046)	+	G-rich	Low_complexity	1	75	(0)	1453837
12	31.2	0.0	0.0	chr16	29169943	29169989	(61168356)	+	(CACCCA)n	Simple_repeat	1	47	(0)	1455299
2434	7.6	0.7	0.0	chr16	29170103	29170404	(61167941)	C	AluY	SINE/Alu	(7)	304	1	1455300
41	4.5	0.0	0.0	chr16	29595078	29595123	(60743222)	+	(GAG)n	Simple_repeat	1	46	(0)	1456054
804	8.9	0.0	0.0	chr16	29661507	29661607	(60676738)	C	AluSz	SINE/Alu	(211)	101	1	1456236
1012	26.2	7.0	0.6	chr16	29661609	29661953	(60676392)	+	LTR40c	LTR/ERVL	74	441	(21)	1456237
13	16.8	0.0	5.4	chr16	29899618	29899654	(60438691)	+	GA-rich	Low_complexity	1	37	(0)	1456816
378	32.1	1.2	12.0	chr16	30021886	30021966	(60316379)	+	MIR	SINE/MIR	83	154	(108)	1457091
2351	9.7	1.0	0.3	chr16	30021967	30022276	(60316069)	+	AluSx	SINE/Alu	1	312	(0)	1457092
17	22.0	1.8	3.5	chr16	30064328	30064383	(60273962)	+	G-rich	Low_complexity	1	57	(0)	1457196
25	10.2	0.0	2.3	chr16	30183646	30183689	(60154656)	+	(CTC)n	Simple_repeat	1	44	(0)	1457487
15	17.7	5.0	2.4	chr16	30183779	30183818	(60154527)	+	(GC)n	Simple_repeat	1	42	(0)	1457488
394	29.8	11.8	0.6	chr16	30494446	30494617	(59843728)	C	MIRb	SINE/MIR	(25)	243	50	1458198
2307	10.1	0.0	0.3	chr16	30495027	30495323	(59843022)	C	AluSx	SINE/Alu	(15)	297	2	1458199
15	7.0	2.9	5.7	chr16	30527310	30527343	(59811002)	+	(CTC)n	Simple_repeat	1	35	(0)	1458286
41	21.8	0.0	0.0	chr16	30659836	30659925	(59678420)	+	GA-rich	Low_complexity	1	90	(0)	1458577
48	17.2	3.7	6.5	chr16	30923456	30923618	(59414727)	+	GA-rich	Low_complexity	1	169	(0)	1459205
14	23.0	0.0	0.0	chr16	30923682	30923733	(59414612)	+	(CCCCTTT)n	Simple_repeat	1	52	(0)	1459206
30	33.2	0.0	0.0	chr16	30979804	30979911	(59358434)	+	GA-rich	Low_complexity	1	108	(0)	1459330
22	22.4	2.9	1.4	chr16	30979960	30980040	(59358305)	+	(CGCCGC)n	Simple_repeat	1	82	(0)	1459331
1671	19.9	2.6	0.6	chr16	47492860	47493193	(42845152)	C	MER61A	LTR/ERV1	(0)	341	1	1467253
2612	20.0	5.2	1.7	chr16	47493218	47494198	(42844147)	C	ERV24_Prim-int	LTR/ERV1	(6240)	1335	1	1467254
1271	23.6	9.4	1.7	chr16	49350240	49350593	(40987752)	+	MLT1B	LTR/ERVL-MaLR	1	384	(6)	1470376
90	34.8	0.8	1.1	chr16	49350798	49351151	(40987194)	+	(AC)n	Simple_repeat	1	357	(0)	1470377
32	12.8	7.6	1.2	chr16	49855654	49855732	(40482613)	+	(GCTC)n	Simple_repeat	1	85	(0)	1471240
317	26.7	4.4	0.0	chr16	49890851	49890936	(40447409)	C	MIR	SINE/MIR	(16)	246	157	1471318
184	34.5	6.2	1.1	chr16	49890949	49891039	(40447306)	C	MIRc	SINE/MIR	(171)	97	2	1471319
55	13.2	6.2	3.9	chr16	49891279	49891422	(40446923)	+	(TA)n	Simple_repeat	1	153	(0)	1471320
740	31.2	3.1	1.4	chr16	50475171	50475456	(39862889)	+	LTR16	LTR/ERVL	148	438	(0)	1472566
214	29.1	6.8	0.9	chr16	50712422	50712532	(39625813)	+	MIR3	SINE/MIR	11	128	(80)	1473033
483	26.0	11.8	3.3	chr16	50712544	50712785	(39625560)	C	MIRb	SINE/MIR	(1)	261	3	1473034
260	13.6	0.2	0.2	chr16	53052893	53053313	(37285032)	+	(CCT)n	Simple_repeat	1	422	(0)	1477111
16	13.2	0.0	0.0	chr16	53053375	53053399	(37284946)	+	(CA)n	Simple_repeat	1	25	(0)	1477112
14	18.3	2.7	0.0	chr16	53099565	53099601	(37238744)	+	(TCCTTCC)n	Simple_repeat	1	38	(0)	1477231
300	30.1	6.6	2.6	chr16	56278599	56278714	(34059631)	C	L2a	LINE/L2	(95)	3331	3211	1482816
191	23.9	17.0	0.0	chr16	56278770	56278857	(34059488)	C	L2a	LINE/L2	(337)	3082	2977	1482816
1949	14.4	2.0	0.0	chr16	57265746	57266037	(33072308)	+	AluJb	SINE/Alu	1	298	(14)	1484671
267	25.6	1.1	9.1	chr16	57266535	57266633	(33071712)	C	L2a	LINE/L2	(264)	3162	3072	1484672
183	26.0	2.5	4.9	chr16	57669006	57669086	(32669259)	+	L2b	LINE/L2	3034	3112	(263)	1485535
16	13.2	2.1	6.2	chr16	57976784	57976830	(32361515)	+	(CTCCAC)n	Simple_repeat	1	48	(0)	1486204
199	30.3	12.4	2.9	chr16	57976845	57976946	(32361399)	C	MamTip2	DNA/hAT-Tip100	(37)	268	156	1486205
668	17.4	1.6	0.0	chr16	58198747	58198867	(32139478)	C	L1MC4	LINE/L1	(666)	7376	7254	1486611
630	27.4	9.9	2.2	chr16	58199158	58199381	(32138964)	+	MIR	SINE/MIR	17	259	(3)	1486612
319	10.8	5.8	3.0	chr16	66873530	66873596	(23464749)	C	MIRc	SINE/MIR	(140)	128	60	1500596
240	9.9	3.5	3.8	chr16	66873628	66874090	(23464255)	+	(CTC)n	Simple_repeat	1	479	(0)	1500597
12	25.5	0.0	0.0	chr16	67563295	67563331	(22775014)	+	(CCTG)n	Simple_repeat	1	37	(0)	1501894
352	33.1	3.1	0.7	chr16	67968823	67968977	(22369368)	+	MIRb	SINE/MIR	88	246	(22)	1502652
1942	15.8	0.7	0.0	chr16	68712026	68712335	(21626010)	C	AluJb	SINE/Alu	(0)	312	1	1504130
990	11.9	0.6	1.2	chr16	72599045	72599206	(17739139)	+	L1PREC2	LINE/L1	5997	6157	(3)	1511708
701	29.5	4.1	3.8	chr16	74070042	74070413	(16267932)	C	LTR16E1	LTR/ERVL	(0)	538	108	1513946
21	20.1	0.9	10.4	chr16	77722373	77722477	(12615868)	+	(GCCCC)n	Simple_repeat	1	106	(0)	1520348
16	10.7	0.0	3.1	chr16	79874926	79874957	(10463388)	+	(GATTGG)n	Simple_repeat	1	32	(0)	1524319
333	30.1	0.9	2.6	chr16	79874973	79875088	(10463257)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	1524320
12	15.4	5.3	2.5	chr16	81703843	81703880	(8634465)	+	G-rich	Low_complexity	1	40	(0)	1527810
943	21.8	8.9	14.0	chr16	81718683	81718962	(8619383)	+	MLT1C	LTR/ERVL-MaLR	174	444	(23)	1527843
457	27.8	5.7	1.1	chr16	81718989	81719167	(8619178)	C	MLT1C	LTR/ERVL-MaLR	(20)	447	278	1527846
75	22.8	0.0	0.0	chr16	81719350	81719517	(8618828)	+	(TCCCG)n	Simple_repeat	1	168	(0)	1527847
698	30.4	0.4	10.4	chr16	84555745	84556031	(5782314)	C	MER102b	DNA/hAT-Charlie	(0)	341	84	1533062
231	31.5	4.4	3.6	chr16	84556042	84556153	(5782192)	+	MER91C	DNA/hAT-Tip100	3	115	(25)	1533063
507	30.9	8.0	3.9	chr16	84556221	84556432	(5781913)	+	L1ME4a	LINE/L1	5744	5968	(156)	1533064
77	29.6	3.0	5.7	chr16	84618272	84618768	(5719577)	+	(CCTCTC)n	Simple_repeat	1	512	(0)	1533213
13	14.3	2.2	8.5	chr16	85089642	85089687	(5248658)	+	(CCT)n	Simple_repeat	1	47	(0)	1534156
350	18.9	0.1	2.9	chr16	85103726	85103802	(5234543)	C	L2b	LINE/L2	(0)	3426	3310	1534178
367	28.2	4.6	2.4	chr16	85103922	85104048	(5234297)	+	L2a	LINE/L2	3288	3417	(9)	1534179
248	34.8	4.3	0.9	chr16	85104312	85104424	(5233921)	C	L2	LINE/L2	(508)	2911	2795	1534180
321	29.0	16.5	4.5	chr16	85253557	85253848	(5084497)	C	L2b	LINE/L2	(95)	3280	2947	1534497
274	32.1	5.4	2.1	chr16	85253882	85254024	(5084321)	C	L2c	LINE/L2	(323)	3064	2917	1534498
181	25.6	0.0	0.0	chr16	85254083	85254121	(5084224)	C	MIR	SINE/MIR	(4)	258	220	1534499
340	17.9	7.1	0.0	chr16	85254183	85254260	(5084085)	C	MIR3	SINE/MIR	(84)	124	41	1534500
202	22.6	0.0	1.9	chr16	85254394	85254447	(5083898)	+	L2b	LINE/L2	3306	3358	(17)	1534501
70	10.8	3.3	0.8	chr16	85312688	85312809	(5025536)	+	(GGA)n	Simple_repeat	1	126	(0)	1534613
540	22.9	7.7	0.0	chr16	85471973	85472129	(4866216)	C	MER20	DNA/hAT-Charlie	(20)	199	30	1534906
1262	23.7	6.1	3.8	chr16	85472180	85472578	(4865767)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	59	1534907
23	28.5	1.2	1.2	chr16	85554777	85554858	(4783487)	+	G-rich	Low_complexity	1	83	(0)	1535053
18	8.8	2.5	4.9	chr16	85555105	85555144	(4783201)	+	(GCC)n	Simple_repeat	1	41	(0)	1535054
536	26.1	9.8	0.6	chr16	85561211	85561376	(4776969)	C	MIR	SINE/MIR	(79)	183	1	1535062
240	28.3	2.0	1.1	chr16	85561575	85561661	(4776684)	C	MIR3	SINE/MIR	(134)	134	43	1535063
230	39.4	3.1	0.0	chr16	85563743	85563836	(4774509)	C	L3b	LINE/CR1	(4)	5228	5132	1535066
180	41.9	4.7	4.7	chr16	85570736	85570993	(4767352)	C	L2c	LINE/L2	(18)	3369	3112	1535078
377	23.2	2.9	0.0	chr16	85571065	85571163	(4767182)	C	MER5A1	DNA/hAT-Charlie	(10)	156	55	1535079
829	28.0	0.0	4.2	chr16	85571279	85571494	(4766851)	C	MER3	DNA/hAT-Charlie	(0)	209	3	1535080
12	9.2	0.0	4.0	chr16	85610399	85610423	(4727922)	+	(AGG)n	Simple_repeat	1	25	(0)	1535141
93	3.2	4.5	2.1	chr16	85653192	85653325	(4685020)	+	(CCT)n	Simple_repeat	1	140	(0)	1535177
267	21.1	9.0	1.4	chr16	85690334	85690405	(4647940)	C	SVA_A	Retroposon/SVA	(1197)	190	113	1535217
877	10.2	0.0	1.7	chr16	85690342	85690459	(4647886)	+	AluJr	SINE/Alu	18	133	(179)	1535218
238	22.9	7.6	0.0	chr16	85690515	85690575	(4647770)	+	MIRc	SINE/MIR	84	149	(119)	1535219
258	30.4	11.1	0.9	chr16	85690868	85690980	(4647365)	+	MIRc	SINE/MIR	111	236	(32)	1535220
243	33.1	2.7	4.7	chr16	85690999	85691046	(4647299)	C	MER5A	DNA/hAT-Charlie	(8)	181	137	1535221
2866	15.7	1.8	3.6	chr16	85691047	85691222	(4647123)	+	L1MB7	LINE/L1	5698	5867	(317)	1535222
114	23.4	5.1	4.7	chr16	85716249	85716734	(4621611)	+	GA-rich	Low_complexity	1	511	(0)	1535286
397	33.9	5.2	0.6	chr16	86863497	86863662	(3474683)	+	MLT1I	LTR/ERVL-MaLR	238	411	(0)	1537376
302	25.0	11.8	3.6	chr16	86863664	86863925	(3474420)	C	L2c	LINE/L2	(167)	3220	2938	1537375
2884	10.4	2.9	2.9	chr16	86864119	86864253	(3474092)	C	L1PA15	LINE/L1	(0)	6165	6032	1537377
2033	12.4	1.3	0.3	chr16	86864254	86864552	(3473793)	C	AluSx1	SINE/Alu	(6)	306	5	1537378
2976	27.1	5.3	4.7	chr16	87203065	87203686	(3134659)	+	L1MD2	LINE/L1	576	1186	(5454)	1538003
235	34.0	7.1	0.7	chr16	87574976	87575120	(2763225)	C	L2c	LINE/L2	(0)	3387	3233	1538700
17	10.6	11.3	1.7	chr16	87575156	87575208	(2763137)	+	(CCTG)n	Simple_repeat	1	59	(0)	1538701
251	31.1	12.9	4.3	chr16	87575349	87575489	(2762856)	C	MIRb	SINE/MIR	(58)	172	18	1538702
383	30.6	9.4	4.0	chr16	87877947	87878096	(2460249)	+	MIRc	SINE/MIR	23	181	(87)	1539219
13	21.4	0.0	6.1	chr16	88340747	88340795	(1997550)	+	G-rich	Low_complexity	1	49	(0)	1539830
555	26.5	6.2	3.2	chr16	88459289	88459486	(1878859)	+	MIR	SINE/MIR	1	203	(65)	1539988
83	26.6	2.0	3.3	chr16	88459509	88459807	(1878538)	+	(CCCCCT)n	Simple_repeat	1	305	(0)	1539989
180	37.2	4.0	1.6	chr16	88491392	88491514	(1846831)	C	MIRb	SINE/MIR	(79)	189	64	1540026
26	0.0	0.0	0.0	chr16	88733965	88733989	(1604356)	+	(TCC)n	Simple_repeat	1	25	(0)	1540370
18	17.8	0.0	0.0	chr16	88733990	88734027	(1604318)	+	(GCT)n	Simple_repeat	1	38	(0)	1540371
503	27.4	9.4	0.0	chr16	88850739	88850968	(1487377)	C	MER68B	LTR/ERVL	(245)	319	66	1540518
140	18.5	2.6	3.6	chr16	88993555	88993906	(1344439)	+	(CCTTCCT)n	Simple_repeat	1	361	(0)	1540673
560	23.1	15.4	3.1	chr16	89001687	89002074	(1336271)	C	MLT1D	LTR/ERVL-MaLR	(7)	460	36	1540685
17	22.3	6.0	3.4	chr16	89003942	89004024	(1334321)	+	GA-rich	Low_complexity	1	88	(0)	1540688
1160	21.6	0.7	3.8	chr16	89363782	89364068	(974277)	+	AluJr	SINE/Alu	9	286	(26)	1541143
1101	11.0	0.0	0.0	chr16	89382852	89383005	(955340)	C	AluSq	SINE/Alu	(24)	289	136	1541172
622	24.4	13.3	0.6	chr16	89390424	89390737	(947608)	+	L1MEc	LINE/L1	1237	1596	(4804)	1541186
340	26.1	8.0	0.9	chr16	89843185	89843300	(495045)	+	MIR	SINE/MIR	22	146	(116)	1541960
1314	25.3	5.5	4.6	chr16	89996170	89996604	(341741)	+	L1MB7	LINE/L1	5731	6169	(15)	1542217
216	28.2	4.1	0.0	chr17	307517	307587	(82949854)	+	L2c	LINE/L2	3279	3352	(35)	1544962
315	32.0	9.2	6.6	chr17	336508	336888	(82920553)	+	L2	LINE/L2	2677	3068	(351)	1545003
28	19.1	1.5	1.5	chr17	1728416	1728482	(81528959)	+	GA-rich	Low_complexity	1	68	(0)	1547676
2510	6.6	0.3	0.0	chr17	1728673	1728977	(81528464)	+	AluY	SINE/Alu	1	306	(5)	1547677
164	18.0	3.1	3.3	chr17	3535129	3535541	(79721900)	+	(CCTTCCT)n	Simple_repeat	1	426	(0)	1551212
590	29.0	8.1	0.5	chr17	3563119	3563312	(79694129)	+	MIRb	SINE/MIR	7	216	(52)	1551268
12	7.9	7.4	0.0	chr17	3696149	3696175	(79561266)	+	G-rich	Low_complexity	1	29	(0)	1551526
20	6.7	3.1	0.0	chr17	3696261	3696292	(79561149)	+	(CCT)n	Simple_repeat	1	33	(0)	1551527
2321	6.0	4.8	1.0	chr17	3696440	3696739	(79560702)	C	AluSx	SINE/Alu	(0)	312	1	1551528
191	12.8	1.5	5.0	chr17	3917991	3918388	(79339053)	+	G-rich	Low_complexity	1	404	(0)	1552005
50	0.0	0.0	0.0	chr17	3918431	3918475	(79338966)	+	(TCC)n	Simple_repeat	1	45	(0)	1552006
13	31.4	0.0	3.2	chr17	3918491	3918552	(79338889)	+	(CTGA)n	Simple_repeat	1	62	(0)	1552007
233	30.4	7.2	4.0	chr17	6462719	6462893	(76794548)	C	MER5A	DNA/hAT-Charlie	(5)	184	4	1557140
13	16.3	2.1	6.1	chr17	7239468	7239500	(76017941)	+	(GCC)n	Simple_repeat	1	30	(0)	1558483
28	4.2	0.0	8.6	chr17	7239501	7239558	(76017883)	+	(CCT)n	Simple_repeat	1	58	(0)	1558484
13	16.3	2.1	6.1	chr17	7239559	7239572	(76017869)	+	(GCC)n	Simple_repeat	1	15	(0)	1558485
502	29.9	12.0	4.0	chr17	7687850	7688124	(75569317)	+	L2a	LINE/L2	3125	3424	(2)	1559336
299	23.7	9.7	0.0	chr17	8162499	8162591	(75094850)	+	MIR3	SINE/MIR	45	147	(61)	1560200
328	28.3	16.6	3.7	chr17	13031667	13031912	(70225529)	C	MER102a	DNA/hAT-Charlie	(2)	328	45	1569080
449	24.6	15.5	2.8	chr17	17399536	17399908	(65857533)	+	L2a	LINE/L2	2733	3169	(257)	1576606
212	18.2	0.0	5.7	chr17	17540855	17540906	(65716535)	+	L2b	LINE/L2	3332	3383	(4)	1576828
21	10.0	0.0	0.0	chr17	17568823	17568855	(65688586)	+	(TCC)n	Simple_repeat	1	33	(0)	1576870
11	21.8	0.0	4.9	chr17	17591984	17592024	(65665417)	+	G-rich	Low_complexity	1	41	(0)	1576914
258	30.2	24.1	0.8	chr17	17592241	17592614	(65664827)	C	L2a	LINE/L2	(1)	3425	2937	1576915
1733	30.4	5.6	3.6	chr17	21677294	21677544	(61579897)	C	SST1	Satellite/centr	(1300)	263	2	1584642
276	22.4	17.7	0.2	chr17	27478745	27478866	(55778575)	+	MIR3	SINE/MIR	20	163	(67)	1586871
12	13.3	9.3	2.1	chr17	27479243	27479285	(55778156)	+	(TCTGTGC)n	Simple_repeat	1	47	(0)	1586872
17	28.6	1.7	0.0	chr17	28745190	28745249	(54512192)	+	(CCTC)n	Simple_repeat	1	61	(0)	1589234
16	21.9	3.3	0.0	chr17	28949300	28949355	(54308086)	+	G-rich	Low_complexity	1	57	(0)	1589654
18	10.9	2.2	6.5	chr17	29126298	29126342	(54131099)	+	GA-rich	Low_complexity	1	46	(0)	1589934
245	33.6	8.1	0.0	chr17	30219150	30219274	(53038167)	+	MIR3	SINE/MIR	6	141	(67)	1592176
1755	14.7	0.0	7.5	chr17	32497154	32497472	(50759969)	+	AluJr	SINE/Alu	4	298	(14)	1596921
17	20.1	6.9	2.6	chr17	34856982	34857053	(48400388)	+	(GAAGGTG)n	Simple_repeat	1	77	(0)	1601212
19	25.7	4.0	3.9	chr17	35764050	35764148	(47493293)	+	(GGACGA)n	Simple_repeat	1	103	(0)	1602754
22	19.1	0.0	0.0	chr17	37719960	37720007	(45537434)	+	(CATCAC)n	Simple_repeat	1	48	(0)	1606398
21	27.1	4.2	2.0	chr17	38257041	38257136	(45000305)	+	(GGAGGC)n	Simple_repeat	1	100	(0)	1607468
14	23.1	5.6	4.0	chr17	38257286	38257356	(45000085)	+	GA-rich	Low_complexity	1	75	(0)	1607469
22	22.1	4.5	3.2	chr17	38257413	38257501	(44999940)	+	G-rich	Low_complexity	1	93	(0)	1607470
12	18.1	2.4	4.8	chr17	38460903	38460943	(44796498)	+	GA-rich	Low_complexity	1	42	(0)	1607906
205	35.6	0.0	3.7	chr17	38461157	38461264	(44796177)	C	L2c	LINE/L2	(3)	3384	3281	1607907
564	31.5	14.6	4.8	chr17	39002984	39003755	(44253686)	+	L2	LINE/L2	1602	2472	(947)	1609094
210	34.8	16.4	1.1	chr17	39641951	39642201	(43615240)	C	L2b	LINE/L2	(154)	3233	2941	1610508
1406	21.8	8.4	0.8	chr17	39650067	39650449	(43606992)	+	MLT1C	LTR/ERVL-MaLR	1	415	(52)	1610529
2010	13.1	0.3	2.3	chr17	39650526	39650830	(43606611)	+	AluJo	SINE/Alu	1	299	(13)	1610530
20	13.3	0.0	4.4	chr17	40111892	40111936	(43145505)	+	(TCTCCC)n	Simple_repeat	1	45	(0)	1611366
232	33.8	0.0	0.0	chr17	40111947	40112017	(43145424)	C	MER131	DNA?	(139)	76	6	1611367
366	28.7	11.2	8.3	chr17	40513997	40514305	(42743136)	C	L2c	LINE/L2	(18)	3357	3064	1612210
1102	16.1	0.0	0.0	chr17	40514306	40514467	(42742974)	+	AluJo	SINE/Alu	137	298	(14)	1612211
37	4.8	0.0	0.0	chr17	40822495	40822537	(42434904)	+	(CTC)n	Simple_repeat	1	43	(0)	1612709
287	36.6	9.5	0.3	chr17	41500050	41500364	(41757077)	C	L2	LINE/L2	(924)	2495	2149	1613716
12	19.6	0.0	0.0	chr17	41576680	41576708	(41680733)	+	GA-rich	Low_complexity	1	29	(0)	1613846
20	16.7	2.0	2.0	chr17	42676445	42676493	(40580948)	+	(TCCCCG)n	Simple_repeat	1	50	(0)	1616130
13	33.2	0.0	1.8	chr17	42676646	42676701	(40580740)	+	GA-rich	Low_complexity	1	56	(0)	1616131
24	23.2	7.1	0.9	chr17	43833195	43833205	(39424236)	+	(GCG)n	Simple_repeat	1	102	(0)	1618679
20	27.4	1.2	3.5	chr17	43833206	43833289	(39424152)	+	G-rich	Low_complexity	1	85	(0)	1618680
319	25.5	0.0	12.2	chr17	43833482	43833588	(39423853)	C	L2b	LINE/L2	(4)	3383	3284	1618681
12	26.1	4.9	4.7	chr17	44087326	44087406	(39170035)	+	G-rich	Low_complexity	1	85	(0)	1619201
24	13.0	0.0	0.0	chr17	44087473	44087538	(39169903)	+	(TCC)n	Simple_repeat	1	66	(0)	1619202
1264	9.9	0.0	0.0	chr17	44087849	44088010	(39169431)	C	AluSx	SINE/Alu	(17)	295	134	1619203
39	24.9	1.0	0.0	chr17	44219550	44219649	(39037792)	+	(GCG)n	Simple_repeat	1	101	(0)	1619463
16	20.5	4.5	4.3	chr17	44221524	44221590	(39035851)	+	(CCTCCTG)n	Simple_repeat	1	70	(0)	1619468
13	17.2	4.9	2.3	chr17	45022143	45022183	(38235258)	+	(CCGG)n	Simple_repeat	1	43	(0)	1621193
338	34.3	4.5	5.4	chr17	45099655	45099876	(38157565)	+	Tigger19a	DNA/TcMar-Tigger	26	245	(78)	1621362
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
612	31.3	4.9	1.7	chr17	45970559	45970795	(37286646)	C	MIRc	SINE/MIR	(22)	246	2	1623151
199	27.9	4.3	4.2	chr17	45970875	45970983	(37286458)	+	L2c	LINE/L2	3273	3405	(21)	1623152
396	25.0	9.6	4.3	chr17	46889849	46889986	(36367455)	+	MIR	SINE/MIR	107	252	(10)	1624929
15	7.2	0.0	8.6	chr17	46890116	46890150	(36367291)	+	(CCT)n	Simple_repeat	1	35	(0)	1624930
19	20.3	3.5	1.7	chr17	46890151	46890171	(36367270)	+	(TCCCTCC)n	Simple_repeat	3	60	(0)	1624931
185	33.5	10.9	1.9	chr17	49455790	49455947	(33801494)	+	MIR3	SINE/MIR	6	179	(29)	1629977
12	31.4	4.5	0.0	chr17	49763533	49763599	(33493842)	+	(CCCTCAC)n	Simple_repeat	1	70	(0)	1630519
15	22.3	0.0	6.8	chr17	50149075	50149133	(33108308)	+	(GGCGG)n	Simple_repeat	1	59	(0)	1631234
15	21.8	0.0	0.0	chr17	50149248	50149284	(33108157)	+	(CTC)n	Simple_repeat	1	37	(0)	1631235
18	18.7	0.0	0.0	chr17	50266027	50266058	(32991383)	+	(CA)n	Simple_repeat	1	32	(0)	1631432
11	35.9	4.2	1.0	chr17	50266141	50266235	(32991206)	+	(TCTCTC)n	Simple_repeat	1	99	(0)	1631433
12	20.4	0.0	0.0	chr17	50618537	50618565	(32638876)	+	(CCT)n	Simple_repeat	1	29	(0)	1632120
707	26.7	13.0	1.4	chr17	50940258	50940862	(32316579)	+	L2a	LINE/L2	2559	3274	(152)	1632781
25	21.8	2.0	3.4	chr17	51120737	51120828	(32136613)	+	G-rich	Low_complexity	1	90	(0)	1633161
276	25.0	3.5	3.5	chr17	51153888	51153974	(32103467)	+	L2c	LINE/L2	3299	3385	(2)	1633249
200	15.4	9.3	2.5	chr17	51153987	51154026	(32103415)	C	L2b	LINE/L2	(2)	3373	3331	1633250
207	29.1	10.4	8.0	chr17	51154191	51154377	(32103064)	C	L2c	LINE/L2	(13)	3374	3183	1633251
30	26.3	1.1	1.7	chr17	57256433	57256521	(26000920)	+	G-rich	Low_complexity	1	88	(0)	1642979
15	22.2	4.3	0.0	chr17	57256609	57256655	(26000786)	+	GA-rich	Low_complexity	1	49	(0)	1642980
668	26.9	11.9	0.0	chr17	57288047	57288269	(25969172)	+	MIRb	SINE/MIR	2	254	(14)	1643016
286	32.4	4.8	4.2	chr17	57772699	57773007	(25484434)	+	LTR78	LTR/ERV1	313	623	(681)	1643819
299	27.7	14.2	2.4	chr17	57773062	57773272	(25484169)	+	LTR78	LTR/ERV1	717	956	(348)	1643819
24	10.5	2.4	0.0	chr17	60525931	60525971	(22731470)	+	(TCC)n	Simple_repeat	1	42	(0)	1649441
28	22.5	1.5	8.2	chr17	62627530	62627662	(20629779)	+	(CCCCCT)n	Simple_repeat	1	135	(0)	1653391
207	34.0	2.8	7.2	chr17	62631372	62631482	(20625959)	C	MIR	SINE/MIR	(148)	114	9	1653394
17	4.3	0.0	0.0	chr17	62631841	62631864	(20625577)	+	(TTCA)n	Simple_repeat	1	24	(0)	1653395
1804	17.4	0.3	0.7	chr17	62725266	62725563	(20531878)	C	AluJb	SINE/Alu	(14)	298	2	1653580
20	3.9	0.0	0.0	chr17	64214065	64214091	(19043350)	+	(CTC)n	Simple_repeat	1	27	(0)	1656095
2081	14.2	0.0	1.0	chr17	64321476	64321784	(18935657)	+	AluJb	SINE/Alu	1	306	(6)	1656325
314	10.0	9.1	0.0	chr17	65100357	65100416	(18157025)	+	MADE1	DNA/TcMar-Mariner	1	66	(14)	1657970
50	23.1	0.8	0.8	chr17	65100533	65100655	(18156786)	+	(TCC)n	Simple_repeat	1	124	(0)	1657971
474	28.2	6.2	6.7	chr17	65136856	65137049	(18120392)	C	MIRb	SINE/MIR	(16)	252	60	1658061
30	16.4	0.0	3.1	chr17	65137148	65137212	(18120229)	+	(TCC)n	Simple_repeat	1	65	(0)	1658062
1124	24.3	2.4	17.2	chr17	65227947	65228492	(18028949)	C	LTR16B	LTR/ERVL	(0)	463	1	1658246
420	26.0	8.8	0.0	chr17	65228556	65228659	(18028782)	C	L2a	LINE/L2	(2)	3424	3311	1658247
967	22.4	2.3	2.7	chr17	65228667	65228886	(18028555)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1658248
30	30.3	3.4	2.6	chr17	66302124	66302272	(16955169)	+	GA-rich	Low_complexity	1	154	(0)	1660070
50	0.0	0.0	0.0	chr17	66302333	66302377	(16955064)	+	(GCC)n	Simple_repeat	1	45	(0)	1660071
518	27.6	2.5	0.6	chr17	66976148	66976321	(16281120)	+	MIRc	SINE/MIR	2	175	(93)	1661160
72	27.7	4.0	2.2	chr17	66976322	66976622	(16280819)	+	(CTCC)n	Simple_repeat	1	313	(0)	1661161
210	30.0	1.4	0.0	chr17	66976650	66976719	(16280722)	+	MIRc	SINE/MIR	159	229	(39)	1661160
14	28.1	3.0	1.5	chr17	67378017	67378082	(15879359)	+	(GCGCGCC)n	Simple_repeat	1	68	(0)	1661912
36	31.8	0.0	0.8	chr17	67826114	67826239	(15431202)	+	GA-rich	Low_complexity	1	126	(0)	1662903
12	5.5	0.0	0.0	chr17	67826262	67826280	(15431161)	+	(GAC)n	Simple_repeat	1	19	(0)	1662904
1497	28.8	12.9	2.0	chr17	72885875	72886728	(10370713)	+	L2a	LINE/L2	1940	2900	(519)	1671182
623	28.3	7.0	11.4	chr17	72886753	72887215	(10370226)	+	L2a	LINE/L2	2986	3426	(0)	1671182
60	0.0	0.0	0.0	chr17	73499860	73499910	(9757531)	+	(TG)n	Simple_repeat	1	51	(0)	1672438
311	15.0	6.2	4.2	chr17	73500059	73500959	(9756482)	+	(TCCATCC)n	Simple_repeat	1	957	(0)	1672439
44	2.3	0.0	0.0	chr17	75616381	75616424	(7641017)	+	(AGG)n	Simple_repeat	1	44	(0)	1676478
13	19.6	2.9	0.0	chr17	75844445	75844479	(7412962)	+	G-rich	Low_complexity	1	36	(0)	1676867
303	26.6	2.8	12.6	chr17	76667978	76668136	(6589305)	+	LTR16A	LTR/ERVL	3	145	(306)	1678516
461	28.0	3.6	2.6	chr17	76668129	76668319	(6589122)	+	LTR16A	LTR/ERVL	258	450	(1)	1678516
2113	11.5	3.3	0.3	chr17	76668369	76668663	(6588778)	+	AluSz	SINE/Alu	2	305	(7)	1678517
12	23.2	0.0	4.5	chr17	77140636	77140679	(6116762)	+	(CCGCC)n	Simple_repeat	1	44	(0)	1679537
722	25.1	5.6	4.9	chr17	77266546	77266792	(5990649)	C	MER103C	DNA/hAT-Charlie	(4)	293	45	1679753
256	29.3	2.6	0.0	chr17	77322072	77322146	(5935295)	C	MIR3	SINE/MIR	(26)	182	106	1679878
334	20.6	0.0	0.0	chr17	77322611	77322678	(5934763)	+	MIR3	SINE/MIR	81	148	(60)	1679879
1534	21.3	4.3	3.7	chr17	77325117	77325351	(5932090)	C	L1M4	LINE/L1	(978)	5168	4943	1679881
409	34.5	8.7	2.9	chr17	77389568	77389839	(5867602)	C	L3b	LINE/CR1	(6)	5226	4938	1679977
183	35.5	4.8	2.1	chr17	77735064	77735204	(5522237)	+	MER5A	DNA/hAT-Charlie	18	162	(27)	1680551
35	2.2	0.0	4.0	chr17	78438419	78438468	(4818973)	+	(GAG)n	Simple_repeat	1	50	(0)	1681844
2326	10.9	0.0	0.3	chr17	78438496	78438798	(4818643)	C	AluSx	SINE/Alu	(10)	302	1	1681845
144	20.8	3.5	1.6	chr17	79296660	79297026	(3960415)	+	(CCT)n	Simple_repeat	1	380	(0)	1683248
771	24.4	16.5	2.1	chr17	79366793	79367164	(3890277)	+	LTR16	LTR/ERVL	3	438	(0)	1683339
97	19.2	2.7	1.3	chr17	79367176	79367398	(3890043)	+	(CCT)n	Simple_repeat	1	229	(0)	1683340
189	15.0	3.0	1.1	chr17	79702834	79703202	(3554239)	+	(CCT)n	Simple_repeat	1	380	(0)	1683781
455	23.4	8.7	0.0	chr17	79849822	79849958	(3407483)	C	MER45A	DNA/hAT-Tip100	(28)	150	1	1684026
2291	10.9	0.3	2.8	chr17	79850348	79850667	(3406774)	C	AluSx	SINE/Alu	(0)	312	1	1684027
356	28.5	7.9	4.1	chr17	79983605	79983871	(3273570)	+	L1ME3F	LINE/L1	5961	6238	(5)	1684248
1496	18.1	0.3	6.8	chr17	79983877	79984186	(3273255)	C	AluJb	SINE/Alu	(22)	290	1	1684249
95	21.4	1.6	3.5	chr17	80064999	80065251	(3192190)	+	(TCCTCC)n	Simple_repeat	1	257	(0)	1684402
12	20.2	2.9	0.0	chr17	81034527	81034560	(2222881)	+	(GGCC)n	Simple_repeat	1	35	(0)	1685811
16	10.2	0.0	7.9	chr17	81392293	81392330	(1865111)	+	GA-rich	Low_complexity	1	38	(0)	1686224
995	18.2	0.0	0.0	chr17	81485254	81485412	(1772029)	C	AluJb	SINE/Alu	(20)	292	134	1686291
2310	9.9	0.3	0.0	chr17	81731535	81731836	(1525605)	+	AluSx1	SINE/Alu	2	304	(8)	1686717
14	12.2	0.0	9.3	chr17	81741007	81741049	(1516392)	+	(CCCT)n	Simple_repeat	1	43	(0)	1686731
2384	7.3	2.9	0.0	chr17	81817175	81817476	(1439965)	+	AluY	SINE/Alu	1	311	(0)	1686766
19	20.2	5.9	0.0	chr17	81860579	81860629	(1396812)	+	(GC)n	Simple_repeat	1	54	(0)	1686834
224	28.8	8.0	1.1	chr17	82310146	82310298	(947143)	C	L2c	LINE/L2	(45)	3342	3178	1687467
13	4.1	8.0	0.0	chr17	82310381	82310405	(947036)	+	(GGA)n	Simple_repeat	1	27	(0)	1687468
2357	9.4	0.0	0.7	chr17	82331858	82332166	(925275)	+	AluSp	SINE/Alu	1	307	(6)	1687493
13	28.8	0.0	2.1	chr18	3452651	3452698	(76920587)	+	(TCC)n	Simple_repeat	1	48	(0)	1694441
13	28.8	0.0	4.7	chr18	12377343	12377406	(67995879)	+	G-rich	Low_complexity	1	64	(0)	1707303
22	18.8	5.1	3.7	chr18	22169335	22169412	(58203873)	+	(CTCCC)n	Simple_repeat	1	82	(0)	1714086
810	20.6	4.8	1.0	chr18	23205868	23206101	(57167184)	+	MLT1C	LTR/ERVL-MaLR	174	472	(33)	1715799
13	9.3	0.0	0.0	chr18	23206133	23206155	(57167130)	+	(GCCT)n	Simple_repeat	1	23	(0)	1715801
13	14.4	3.2	0.0	chr18	23586439	23586469	(56786816)	+	(GCAGGA)n	Simple_repeat	1	32	(0)	1716472
15	20.0	3.6	3.5	chr18	24014646	24014700	(56358585)	+	(CCGCGG)n	Simple_repeat	1	57	(0)	1717217
26	0.0	0.0	0.0	chr18	24014742	24014766	(56358519)	+	(CTCCC)n	Simple_repeat	1	25	(0)	1717218
24	20.8	3.3	0.0	chr18	24014886	24014946	(56358339)	+	(GCG)n	Simple_repeat	1	63	(0)	1717219
27	10.9	2.0	1.9	chr18	25351924	25351974	(55021311)	+	(GAG)n	Simple_repeat	1	52	(0)	1719216
12	18.1	2.4	4.8	chr18	36828617	36828657	(43544628)	+	(CCT)n	Simple_repeat	1	42	(0)	1735268
1035	26.2	2.6	3.9	chr18	48020224	48020642	(32352643)	C	MER115	DNA/hAT-Tip100	(3)	690	213	1751186
195	26.3	9.5	5.8	chr18	48942000	48942120	(31431165)	C	L3	LINE/CR1	(17)	4082	3957	1752703
23	22.3	0.0	1.7	chr18	50281424	50281482	(30091803)	+	(CCT)n	Simple_repeat	1	59	(0)	1754897
20	10.1	0.0	0.0	chr18	51196765	51196796	(29176489)	+	(CCG)n	Simple_repeat	1	32	(0)	1756515
35	27.0	0.9	0.9	chr18	51196911	51197018	(29176267)	+	(TCCTCC)n	Simple_repeat	1	109	(0)	1756516
31	11.5	0.0	0.0	chr18	55585862	55585908	(24787377)	+	(CT)n	Simple_repeat	1	47	(0)	1762863
30	5.3	0.0	0.0	chr18	55586114	55586153	(24787132)	+	(GAG)n	Simple_repeat	1	40	(0)	1762864
87	0.0	0.0	0.0	chr18	55586154	55586229	(24787056)	+	(AGC)n	Simple_repeat	1	76	(0)	1762865
629	21.8	12.1	6.5	chr18	57906830	57907015	(22466270)	C	LTR16B1	LTR/ERVL	(1)	479	282	1766438
266	30.8	4.0	7.7	chr18	57907062	57907216	(22466069)	C	LTR16B1	LTR/ERVL	(317)	163	15	1766438
28	30.3	0.3	11.0	chr18	69839094	69839427	(10533858)	+	(CCTCC)n	Simple_repeat	1	335	(0)	1783744
55	0.0	0.0	0.0	chr18	74173343	74173392	(6199893)	+	(CCCAGTCCT)n	Simple_repeat	1	50	(0)	1789517
37	0.0	0.0	0.0	chr18	74657902	74657935	(5715350)	+	(TTC)n	Simple_repeat	1	34	(0)	1790176
246	23.1	0.0	0.0	chr18	79915932	79915983	(457302)	+	MER21A	LTR/ERVL	15	66	(865)	1795893
1616	21.4	14.7	7.5	chr18	79916325	79916935	(456350)	+	MER21A	LTR/ERVL	55	716	(215)	1795893
2431	7.0	0.0	1.3	chr19	771058	771372	(57846244)	+	AluY	SINE/Alu	1	311	(0)	1797566
317	29.8	5.3	0.9	chr19	771406	771622	(57845994)	+	L2	LINE/L2	2783	3009	(410)	1797567
2052	6.8	3.9	8.4	chr19	860182	860503	(57757113)	C	AluSx1	SINE/Alu	(3)	309	3	1797778
846	23.9	9.3	9.5	chr19	895285	895646	(57721970)	+	MLT1C	LTR/ERVL-MaLR	38	403	(64)	1797838
1637	15.8	5.4	3.8	chr19	895647	895797	(57721819)	C	AluJo	SINE/Alu	(10)	302	144	1797839
336	31.0	3.7	3.1	chr19	907483	907642	(57709974)	C	MIRb	SINE/MIR	(93)	175	15	1797858
204	17.8	1.8	0.0	chr19	1052347	1052741	(57564875)	+	GA-rich	Low_complexity	1	402	(0)	1798144
217	15.1	0.5	1.3	chr19	1164604	1164993	(57452623)	+	GA-rich	Low_complexity	1	392	(0)	1798307
145	29.9	4.6	2.5	chr19	1282063	1282763	(57334853)	+	GA-rich	Low_complexity	1	733	(0)	1798496
13	25.2	0.0	2.3	chr19	1283032	1283075	(57334541)	+	(CCCGTGC)n	Simple_repeat	1	44	(0)	1798497
241	18.1	10.8	5.7	chr19	1292406	1292493	(57325123)	C	L2b	LINE/L2	(1)	3374	3282	1798508
315	26.3	18.9	0.0	chr19	1292546	1292743	(57324873)	C	L2b	LINE/L2	(339)	3080	2837	1798508
225	13.6	1.7	16.9	chr19	1479701	1479741	(57137875)	C	L1MB7	LINE/L1	(14)	6170	6141	1798841
2289	9.6	0.3	1.6	chr19	1479742	1480054	(57137562)	C	AluSx1	SINE/Alu	(3)	309	1	1798842
188	29.1	10.4	0.0	chr19	1635178	1635263	(56982353)	+	L2	LINE/L2	2489	2584	(835)	1799170
261	33.6	3.0	2.3	chr19	1635323	1635453	(56982163)	+	L2	LINE/L2	2760	2891	(528)	1799170
180	25.9	12.9	0.0	chr19	1746425	1746478	(56871138)	C	MIR3	SINE/MIR	(37)	171	110	1799447
180	24.6	5.0	1.7	chr19	1747689	1747746	(56869870)	C	L2b	LINE/L2	(0)	3375	3316	1799451
249	21.0	3.6	8.0	chr19	1747795	1747882	(56869734)	+	L2c	LINE/L2	3066	3149	(238)	1799452
16	4.5	0.0	0.0	chr19	2032702	2032724	(56584892)	+	(TTCA)n	Simple_repeat	1	23	(0)	1800007
205	33.3	6.6	3.2	chr19	2032836	2033024	(56584592)	C	L2b	LINE/L2	(197)	3178	2983	1800008
549	19.3	0.0	0.0	chr19	2033058	2033140	(56584476)	C	AluJo	SINE/Alu	(227)	85	3	1800009
892	10.7	0.0	0.0	chr19	2968970	2969091	(55648525)	C	AluSz6	SINE/Alu	(0)	312	191	1802048
1053	22.3	7.7	3.8	chr19	2969098	2969410	(55648206)	+	MLT1C	LTR/ERVL-MaLR	140	465	(2)	1802045
187	29.9	11.6	1.8	chr19	3003260	3003355	(55614261)	C	MIRc	SINE/MIR	(100)	168	60	1802144
2340	10.7	0.0	0.0	chr19	3003356	3003663	(55613953)	+	AluSx1	SINE/Alu	1	308	(4)	1802145
31	23.2	3.2	4.6	chr19	3029117	3029242	(55588374)	+	(GCGGCG)n	Simple_repeat	1	130	(0)	1802206
13	20.4	0.0	4.7	chr19	3046720	3046762	(55570854)	+	G-rich	Low_complexity	1	43	(0)	1802257
239	32.6	10.1	3.0	chr19	3155444	3155544	(55462072)	C	MIRb	SINE/MIR	(116)	152	44	1802523
332	31.7	0.0	2.9	chr19	3155597	3155700	(55461916)	+	MIRb	SINE/MIR	97	197	(71)	1802524
15	19.6	0.0	0.0	chr19	3366078	3366106	(55251510)	+	G-rich	Low_complexity	1	29	(0)	1803066
42	30.4	5.0	1.3	chr19	3366345	3366566	(55251050)	+	G-rich	Low_complexity	1	233	(0)	1803067
12	9.8	0.0	11.9	chr19	3366593	3366634	(55250982)	+	(GCCC)n	Simple_repeat	1	42	(0)	1803068
237	29.6	8.0	0.0	chr19	3644990	3645070	(54972546)	C	MER63B	DNA/hAT-Blackjack	(1)	435	348	1803700
265	18.8	3.0	7.2	chr19	3645208	3645276	(54972340)	C	L2b	LINE/L2	(2)	3373	3308	1803701
719	22.0	11.2	3.2	chr19	3668296	3668605	(54949011)	+	MLT1D	LTR/ERVL-MaLR	83	420	(85)	1803737
704	29.9	4.2	6.7	chr19	3696269	3696899	(54920717)	C	L2a	LINE/L2	(6)	3420	2791	1803803
36	13.2	0.0	0.0	chr19	3697428	3697502	(54920114)	+	(GGACCGAGCT)n	Simple_repeat	1	75	(0)	1803804
204	38.1	2.5	0.0	chr19	3697537	3697654	(54919962)	C	L2a	LINE/L2	(727)	2692	2572	1803803
173	19.8	2.6	0.5	chr19	3908570	3908946	(54708670)	+	(CTC)n	Simple_repeat	1	387	(0)	1804311
20	14.6	2.0	4.0	chr19	3951054	3951102	(54666514)	+	(CCT)n	Simple_repeat	1	50	(0)	1804419
21	14.6	0.0	0.0	chr19	4108821	4108858	(54508758)	+	(GAG)n	Simple_repeat	1	38	(0)	1804764
222	30.5	9.7	4.3	chr19	4108891	4109075	(54508541)	C	MIRc	SINE/MIR	(36)	232	37	1804765
2093	10.5	3.6	0.7	chr19	4140152	4140447	(54477169)	+	AluSx1	SINE/Alu	1	305	(7)	1804845
236	16.3	2.3	0.0	chr19	4140727	4140769	(54476847)	C	MER58B	DNA/hAT-Charlie	(0)	341	298	1804846
581	22.6	2.9	2.8	chr19	4227775	4229163	(54388453)	+	(CT)n	Simple_repeat	1	1387	(0)	1805095
267	13.6	0.0	0.0	chr19	4229744	4229787	(54387829)	C	MIR1_Amn	SINE/MIR	(80)	150	107	1805096
618	30.6	0.0	7.3	chr19	4786794	4786888	(53830728)	C	MER63C	DNA/hAT-Blackjack	(550)	380	288	1806469
2272	12.2	0.0	0.0	chr19	4786889	4787191	(53830425)	+	AluSc	SINE/Alu	1	303	(6)	1806470
2032	12.5	0.3	3.0	chr19	4869773	4870077	(53747539)	C	AluSx	SINE/Alu	(13)	299	3	1806724
1028	27.9	12.4	0.9	chr19	4870078	4870316	(53747300)	C	L2a	LINE/L2	(240)	3186	2935	1806723
194	18.4	9.3	0.0	chr19	4870318	4870366	(53747250)	C	MIR1_Amn	SINE/MIR	(105)	125	72	1806725
16	9.8	0.0	0.0	chr19	4870458	4870479	(53747137)	+	(T)n	Simple_repeat	1	22	(0)	1806726
12	10.3	2.7	7.9	chr19	5445713	5445749	(53171867)	+	GA-rich	Low_complexity	1	38	(0)	1808010
1759	14.9	0.0	1.5	chr19	5446127	5446394	(53171222)	C	AluJo	SINE/Alu	(11)	301	38	1808011
13	11.2	3.2	3.1	chr19	5804091	5804121	(52813495)	+	(CAGCC)n	Simple_repeat	1	32	(0)	1808887
23	18.3	4.7	1.5	chr19	6424702	6424765	(52192851)	+	(GGC)n	Simple_repeat	1	67	(0)	1810203
123	16.7	3.4	5.7	chr19	6429299	6429653	(52187963)	+	GA-rich	Low_complexity	1	367	(0)	1810214
16	17.6	3.3	6.5	chr19	6678053	6678112	(51939504)	+	(GGCGT)n	Simple_repeat	1	62	(0)	1810893
444	32.7	5.9	4.7	chr19	7483876	7484073	(51133543)	+	L1ME4b	LINE/L1	398	605	(287)	1813031
16	26.5	1.7	3.3	chr19	7860952	7861011	(50756605)	+	G-rich	Low_complexity	1	61	(0)	1813869
187	31.4	2.8	0.0	chr19	7861382	7861451	(50756165)	+	MamRTE1	LINE/RTE-BovB	1369	1440	(2372)	1813870
16	8.1	0.0	0.0	chr19	7861493	7861518	(50756098)	+	(GCCTG)n	Simple_repeat	1	26	(0)	1813871
268	16.7	0.0	2.0	chr19	7861649	7861697	(50755919)	C	MIR	SINE/MIR	(90)	172	125	1813872
222	27.4	11.2	3.2	chr19	7921790	7921923	(50695693)	+	MIRb	SINE/MIR	2	144	(86)	1813981
1355	16.1	5.0	1.0	chr19	8047014	8047321	(50570295)	+	L1M2	LINE/L1	2251	2571	(3572)	1814263
280	36.4	4.7	3.2	chr19	8224449	8224638	(50392978)	C	L2c	LINE/L2	(179)	3208	3016	1814748
422	19.7	0.0	0.0	chr19	9621595	9621665	(48995951)	+	FLAM_C	SINE/Alu	1	71	(62)	1817789
3155	15.1	1.8	2.5	chr19	9621666	9622251	(48995365)	C	LTR10C	LTR/ERV1	(62)	529	1	1817790
15	25.6	2.9	4.2	chr19	9945616	9945685	(48671931)	+	GA-rich	Low_complexity	1	72	(0)	1818521
30	14.5	0.0	0.0	chr19	10092233	10092285	(48525331)	+	(GGA)n	Simple_repeat	1	53	(0)	1818884
13	9.7	0.0	0.0	chr19	10119656	10119677	(48497939)	+	(TCC)n	Simple_repeat	1	22	(0)	1818934
14	15.4	5.6	0.0	chr19	10300071	10300106	(48317510)	+	(CCT)n	Simple_repeat	1	38	(0)	1819394
2151	13.7	0.3	0.0	chr19	10862548	10862847	(47754769)	+	AluSz	SINE/Alu	1	301	(11)	1820868
886	15.0	0.0	0.0	chr19	12779523	12779655	(45837961)	C	FLAM_C	SINE/Alu	(10)	133	1	1825196
252	31.9	11.6	2.5	chr19	12800722	12800917	(45816699)	C	MIRb	SINE/MIR	(31)	237	22	1825238
35	28.5	2.0	3.3	chr19	12833820	12833883	(45783733)	+	(CCG)n	Simple_repeat	1	104	(47)	1825326
29	8.4	0.0	5.4	chr19	12833884	12833940	(45783676)	+	(CTCCTCC)n	Simple_repeat	1	53	(0)	1825327
35	28.5	2.0	3.3	chr19	12833941	12833967	(45783649)	+	(CCG)n	Simple_repeat	105	151	(0)	1825326
40	6.6	0.0	0.0	chr19	13023061	13023108	(45594508)	+	(TC)n	Simple_repeat	1	48	(0)	1825767
18	14.7	0.0	0.0	chr19	13023167	13023196	(45594420)	+	(GA)n	Simple_repeat	1	30	(0)	1825768
18	12.2	0.0	0.0	chr19	13023241	13023267	(45594349)	+	(CA)n	Simple_repeat	1	27	(0)	1825769
29	23.1	1.2	2.3	chr19	13023271	13023355	(45594261)	+	(CCCT)n	Simple_repeat	1	86	(0)	1825770
186	11.1	0.0	7.7	chr19	13123181	13123219	(45494397)	+	L2a	LINE/L2	3030	3065	(361)	1825917
12	21.6	0.0	4.9	chr19	13123435	13123475	(45494141)	+	GA-rich	Low_complexity	1	41	(0)	1825918
12	7.5	6.7	3.1	chr19	13163845	13163874	(45453742)	+	(GCCCT)n	Simple_repeat	1	32	(0)	1826010
19	34.4	3.0	4.6	chr19	13208124	13208291	(45409325)	+	GA-rich	Low_complexity	1	173	(0)	1826146
14	16.9	3.0	0.0	chr19	13862328	13862360	(44755256)	+	GA-rich	Low_complexity	1	34	(0)	1827994
271	29.4	13.9	4.0	chr19	13862508	13862529	(44755087)	+	MIRc	SINE/MIR	43	67	(201)	1827995
2541	7.5	0.0	0.0	chr19	13862530	13862836	(44754780)	C	AluSg	SINE/Alu	(3)	307	1	1827996
2011	8.3	6.7	0.0	chr19	14235226	14235489	(44382127)	+	AluSq4	SINE/Alu	1	283	(28)	1828904
53	0.0	0.0	0.0	chr19	14235490	14235537	(44382079)	+	(AAAT)n	Simple_repeat	1	48	(0)	1828905
1538	21.0	5.9	7.5	chr19	14235921	14236038	(44381578)	+	MLT1C	LTR/ERVL-MaLR	12	116	(351)	1828906
14	8.2	0.0	3.6	chr19	17328498	17328525	(41289091)	+	(GCCGC)n	Simple_repeat	1	28	(0)	1836039
39	10.2	0.0	0.0	chr19	17328584	17328646	(41288970)	+	(CCT)n	Simple_repeat	1	63	(0)	1836040
19	22.3	3.0	2.9	chr19	17328664	17328729	(41288887)	+	(TCC)n	Simple_repeat	1	68	(0)	1836041
29	22.9	0.0	9.0	chr19	17328730	17328792	(41288824)	+	(CCCGCC)n	Simple_repeat	5	133	(0)	1836042
33	25.9	1.0	2.0	chr19	17395197	17395295	(41222321)	+	(CTCCTC)n	Simple_repeat	1	100	(0)	1836217
208	28.8	7.6	0.0	chr19	17395353	17395425	(41222191)	+	L2a	LINE/L2	2990	3068	(358)	1836218
2314	10.1	0.0	0.0	chr19	17395533	17395829	(41221787)	+	AluSq2	SINE/Alu	1	297	(16)	1836219
49	26.0	5.9	3.2	chr19	17467823	17468061	(41149555)	+	GA-rich	Low_complexity	1	253	(0)	1836443
35	6.0	1.9	1.8	chr19	17468138	17468191	(41149425)	+	(TTTC)n	Simple_repeat	1	55	(0)	1836444
2221	11.9	0.0	0.0	chr19	17468195	17468489	(41149127)	C	AluSz6	SINE/Alu	(17)	295	1	1836445
201	29.2	18.8	2.3	chr19	17739230	17739362	(40878254)	C	L2b	LINE/L2	(181)	3194	3035	1837146
695	29.0	9.6	1.5	chr19	17778935	17779662	(40837954)	C	L2a	LINE/L2	(23)	3403	2474	1837257
230	24.8	20.4	0.8	chr19	18090855	18090984	(40526632)	C	L2b	LINE/L2	(188)	3187	3026	1838066
70	13.3	3.8	3.6	chr19	18304375	18304534	(40313082)	+	GA-rich	Low_complexity	1	166	(0)	1838584
31	11.4	0.0	0.0	chr19	18415571	18415619	(40201997)	+	(GGA)n	Simple_repeat	1	49	(0)	1838862
254	38.0	0.0	0.0	chr19	18415660	18415772	(40201844)	C	L2a	LINE/L2	(308)	3118	3006	1838863
297	26.7	13.7	2.4	chr19	18737556	18737624	(39879992)	+	MLT1C	LTR/ERVL-MaLR	7	77	(390)	1839476
2040	16.9	3.5	10.5	chr19	18737625	18737739	(39879877)	+	Tigger2a	DNA/TcMar-Tigger	1	109	(325)	1839477
32	5.1	0.0	2.3	chr19	18737740	18737782	(39879834)	+	(CTC)n	Simple_repeat	1	43	(0)	1839478
2040	16.9	3.5	10.5	chr19	18737783	18738041	(39879575)	+	Tigger2a	DNA/TcMar-Tigger	110	361	(73)	1839477
379	26.2	2.8	7.8	chr19	18986607	18986759	(39630857)	C	MIRb	SINE/MIR	(83)	185	41	1840013
231	19.4	6.9	1.5	chr19	18986837	18986904	(39630712)	+	HAL1M8	LINE/L1	1607	1678	(1313)	1840014
250	19.2	0.0	0.0	chr19	18987050	18987101	(39630515)	+	MER4-int	LTR/ERV1	1111	1162	(5436)	1840015
293	22.5	1.9	4.1	chr19	19239340	19240216	(39377400)	+	(CCT)n	Simple_repeat	1	894	(0)	1840583
282	34.3	6.9	0.0	chr19	19533091	19533198	(39084418)	C	MIRb	SINE/MIR	(116)	152	37	1841144
94	18.4	2.8	3.9	chr19	19533401	19533650	(39083966)	+	(CCT)n	Simple_repeat	1	257	(0)	1841145
334	28.4	5.6	3.6	chr19	29259207	29259345	(29358271)	+	MLT1O	LTR/ERVL-MaLR	35	176	(366)	1849981
16	16.2	0.0	2.7	chr19	31349229	31349265	(27268351)	+	(CCGCCG)n	Simple_repeat	1	37	(0)	1853079
15	17.9	0.0	4.8	chr19	31349277	31349318	(27268298)	+	G-rich	Low_complexity	1	42	(0)	1853080
39	18.5	1.0	4.0	chr19	31349425	31349523	(27268093)	+	GA-rich	Low_complexity	1	100	(0)	1853081
2552	7.7	0.3	0.0	chr19	32744219	32744529	(25873087)	+	AluSz	SINE/Alu	1	312	(0)	1855421
412	32.9	8.6	9.8	chr19	33214576	33214952	(25402664)	+	L2c	LINE/L2	3003	3386	(1)	1856419
3288	11.8	11.9	2.4	chr19	33717477	33717866	(24899750)	C	MER41E	LTR/ERV1	(146)	449	1	1857220
1939	18.4	2.8	2.6	chr19	33717867	33717975	(24899641)	C	MLT1B	LTR/ERVL-MaLR	(274)	116	1	1857219
1003	20.5	0.0	0.0	chr19	33718217	33718382	(24899234)	C	FRAM	SINE/Alu	(10)	166	1	1857222
252	24.2	2.0	3.9	chr19	35039430	35039532	(23578084)	+	MSR1	Satellite	11	111	(0)	1859570
2307	11.5	1.3	0.0	chr19	35151857	35152161	(23465455)	+	AluSx	SINE/Alu	1	309	(3)	1859827
17	16.9	0.0	0.0	chr19	35152162	35152195	(23465421)	+	GA-rich	Low_complexity	1	34	(0)	1859828
31	22.3	4.8	4.9	chr19	35152594	35152735	(23464881)	+	GA-rich	Low_complexity	1	141	(0)	1859829
1496	17.8	13.3	0.4	chr19	35375155	35375423	(23242193)	+	AluJo	SINE/Alu	1	309	(3)	1860272
93	3.1	2.0	4.7	chr19	35375426	35375571	(23242045)	+	(AAGA)n	Simple_repeat	1	149	(0)	1860273
1586	13.6	3.0	12.7	chr19	35490810	35491141	(23126475)	C	AluJb	SINE/Alu	(0)	312	14	1860536
20	15.0	3.3	9.7	chr19	35557852	35557941	(23059675)	+	G-rich	Low_complexity	1	93	(0)	1860653
469	30.6	11.6	1.0	chr19	35648545	35648752	(22968864)	C	MIR	SINE/MIR	(2)	260	28	1860842
1086	3.7	2.2	0.0	chr19	35672881	35673014	(22944602)	C	AluSx	SINE/Alu	(175)	137	1	1860921
229	22.7	3.0	5.8	chr19	35673041	35673143	(22944473)	C	L1ME2z	LINE/L1	(25)	6419	6320	1860922
610	26.4	4.4	1.8	chr19	35673603	35673834	(22943782)	C	MIR	SINE/MIR	(23)	245	3	1860923
338	19.9	1.8	0.0	chr19	35693876	35693979	(22923637)	+	LTR41	LTR/ERVL	90	194	(564)	1860987
104	17.0	0.4	6.7	chr19	35694035	35694303	(22923313)	+	(CCT)n	Simple_repeat	1	270	(0)	1860988
196	27.4	4.8	4.2	chr19	35757164	35757360	(22860256)	C	MIRc	SINE/MIR	(13)	255	3	1861078
25	19.3	0.0	0.0	chr19	35786505	35786557	(22831059)	+	(TCC)n	Simple_repeat	1	53	(0)	1861147
1706	14.7	0.3	10.6	chr19	38415350	38415360	(20202256)	C	AluJr	SINE/Alu	(0)	312	303	1866604
61	23.0	6.1	2.0	chr19	38523437	38523666	(20093950)	+	(CCCTCCT)n	Simple_repeat	1	244	(0)	1866854
280	21.5	0.0	13.2	chr19	38637291	38637323	(19980293)	+	MIRc	SINE/MIR	81	108	(160)	1867151
2360	7.2	0.7	0.0	chr19	38637324	38637613	(19980003)	C	AluY	SINE/Alu	(19)	292	1	1867152
259	17.5	0.0	10.0	chr19	38726614	38726683	(19890933)	+	MER63B	DNA/hAT-Blackjack	364	426	(10)	1867309
44	0.0	0.0	0.0	chr19	38728411	38728450	(19889166)	+	(CTC)n	Simple_repeat	1	40	(0)	1867311
229	23.3	0.0	0.0	chr19	38918269	38918311	(19699305)	C	MER91C	DNA/hAT-Tip100	(97)	43	1	1867747
246	32.9	8.3	0.7	chr19	40268470	40268613	(18349003)	C	MIRb	SINE/MIR	(41)	227	72	1870614
28	19.2	0.0	0.0	chr19	40605493	40605551	(18012065)	+	(GGCGGA)n	Simple_repeat	1	59	(0)	1871506
33	25.9	5.2	2.5	chr19	40614100	40614253	(18003363)	+	(CTCCT)n	Simple_repeat	1	162	(0)	1871515
42	0.0	0.0	0.0	chr19	40634800	40634837	(17982779)	+	(CAT)n	Simple_repeat	1	38	(0)	1871567
2307	10.2	0.0	0.7	chr19	40634848	40635152	(17982464)	+	AluSx1	SINE/Alu	1	303	(9)	1871568
11	21.5	6.0	1.9	chr19	41928335	41928384	(16689232)	+	(GAGAGCT)n	Simple_repeat	1	53	(0)	1874188
13	23.8	3.9	1.9	chr19	41928395	41928445	(16689171)	+	(GCGG)n	Simple_repeat	1	53	(0)	1874189
35	9.8	0.0	0.0	chr19	41928464	41928518	(16689098)	+	(CTC)n	Simple_repeat	1	55	(0)	1874190
12	19.7	0.0	5.1	chr19	41928531	41928569	(16689047)	+	(GCCC)n	Simple_repeat	1	39	(0)	1874191
19	14.3	2.6	0.0	chr19	41928590	41928628	(16688988)	+	(GGC)n	Simple_repeat	1	40	(0)	1874192
608	6.8	3.5	0.2	chr19	41991692	41992214	(16625402)	C	MSR1	Satellite	(17)	540	1	1874328
24	19.9	1.4	4.3	chr19	42069925	42069993	(16547623)	+	GA-rich	Low_complexity	1	70	(0)	1874502
22	16.8	8.2	3.3	chr19	42070106	42070190	(16547426)	+	(GCCT)n	Simple_repeat	1	92	(0)	1874503
18	8.0	0.0	0.0	chr19	43670083	43670109	(14947507)	+	(AGC)n	Simple_repeat	1	27	(0)	1877379
314	24.8	16.9	0.0	chr19	43670360	43670472	(14947144)	+	MIR	SINE/MIR	17	152	(110)	1877380
2008	16.9	0.3	0.0	chr19	43682550	43682856	(14934760)	+	AluJo	SINE/Alu	1	308	(4)	1877423
778	7.4	0.2	0.1	chr19	43780271	43780686	(14836930)	+	MSR1	Satellite	1	416	(0)	1877658
55	26.3	2.3	4.5	chr19	44718868	44719085	(13898531)	+	GA-rich	Low_complexity	1	223	(0)	1879425
251	33.0	0.0	0.0	chr19	44719257	44719350	(13898266)	C	MIRb	SINE/MIR	(65)	203	110	1879426
687	23.4	12.2	0.4	chr19	44719366	44719654	(13897962)	+	L2a	LINE/L2	2861	3189	(198)	1879427
19	7.2	0.0	0.0	chr19	45146804	45146832	(13470784)	+	(GGA)n	Simple_repeat	1	29	(0)	1880563
33	20.2	0.0	5.3	chr19	45420487	45420580	(13197036)	+	(CCT)n	Simple_repeat	1	94	(0)	1881253
15	11.6	4.9	4.7	chr19	45669539	45669579	(12948037)	+	(CTG)n	Simple_repeat	1	43	(0)	1881955
2264	6.8	0.0	1.1	chr19	45669668	45669948	(12947668)	+	AluSx1	SINE/Alu	5	282	(30)	1881956
265	32.5	3.2	0.0	chr19	45780253	45780372	(12837244)	C	MER5A	DNA/hAT-Charlie	(65)	124	1	1882239
17	13.2	1.6	9.7	chr19	45780645	45780706	(12836910)	+	GA-rich	Low_complexity	1	57	(0)	1882240
891	21.0	0.0	3.8	chr19	45817400	45817612	(12800004)	C	AluJo	SINE/Alu	(0)	312	121	1882324
353	38.1	2.5	1.1	chr19	46412620	46412892	(12204724)	C	MamGyp-int	LTR/Gypsy	(4609)	494	218	1883595
1176	33.9	1.4	1.9	chr19	46470583	46471094	(12146522)	C	MamGyp-int	LTR/Gypsy	(4557)	546	38	1883748
292	27.2	7.2	0.0	chr19	46489892	46489994	(12127622)	C	L2a	LINE/L2	(2)	3373	3263	1883812
791	23.4	1.1	1.7	chr19	46513402	46513579	(12104037)	C	MER5B	DNA/hAT-Charlie	(0)	178	2	1883881
274	12.2	2.6	0.5	chr19	46513866	46513924	(12103692)	+	MIRc	SINE/MIR	109	168	(62)	1883882
16	11.8	5.1	2.4	chr19	46659167	46659205	(11958411)	+	(CTC)n	Simple_repeat	1	41	(0)	1884225
24	21.9	7.2	3.7	chr19	46659280	46659404	(11958212)	+	G-rich	Low_complexity	1	134	(0)	1884226
333	18.8	1.5	18.5	chr19	47079357	47079461	(11538155)	+	MER33	DNA/hAT-Charlie	236	324	(0)	1885202
2124	11.3	3.3	0.0	chr19	47079617	47079909	(11537707)	+	AluSx3	SINE/Alu	2	304	(7)	1885207
18	32.9	0.9	3.8	chr19	47112179	47112283	(11505333)	+	(GAGC)n	Simple_repeat	1	106	(0)	1885277
32	0.0	0.0	0.0	chr19	47112303	47112332	(11505284)	+	(TCC)n	Simple_repeat	1	30	(0)	1885278
15	12.0	0.0	3.3	chr19	47112359	47112388	(11505228)	+	(CCT)n	Simple_repeat	1	30	(0)	1885279
26	0.0	0.0	0.0	chr19	47226328	47226352	(11391264)	+	(CCCTGG)n	Simple_repeat	1	25	(0)	1885597
19	5.6	8.1	0.0	chr19	47610186	47610222	(11007394)	+	(GGAG)n	Simple_repeat	1	40	(0)	1886574
16	15.4	2.8	0.0	chr19	47610607	47610642	(11006974)	+	(CACC)n	Simple_repeat	1	37	(0)	1886575
14	16.1	10.5	1.6	chr19	47713361	47713368	(10904248)	+	(CGTCC)n	Simple_repeat	1	22	(41)	1886851
15	18.4	2.7	0.0	chr19	47713369	47713405	(10904211)	+	(CCCT)n	Simple_repeat	1	38	(0)	1886852
14	16.1	10.5	1.6	chr19	47713406	47713417	(10904199)	+	(CGTCC)n	Simple_repeat	23	63	(0)	1886851
228	27.0	1.3	0.0	chr19	47991049	47991122	(10626494)	+	Kanga1d	DNA/TcMar-Tc2	535	609	(0)	1887639
227	21.4	2.9	2.0	chr19	47991356	47991941	(10625675)	+	(CCT)n	Simple_repeat	1	603	(0)	1887640
856	28.6	2.3	0.0	chr19	48489596	48489808	(10127808)	C	MIR	SINE/MIR	(0)	262	45	1888861
190	38.4	1.4	0.0	chr19	48490034	48490106	(10127510)	+	MIRb	SINE/MIR	141	214	(54)	1888862
335	25.8	18.9	10.4	chr19	48490142	48490241	(10127375)	+	MIR	SINE/MIR	21	146	(116)	1888863
33	2.9	0.0	0.0	chr19	48493917	48493951	(10123665)	+	(TCCTCG)n	Simple_repeat	1	35	(0)	1888867
1415	26.7	11.0	2.6	chr19	48588604	48589545	(10028071)	C	L2a	LINE/L2	(133)	3293	2253	1889155
455	24.0	4.0	1.6	chr19	48589557	48589679	(10027937)	C	MER77	LTR/ERVL	(6)	598	473	1889159
27	18.4	5.6	7.3	chr19	48599259	48599400	(10018216)	+	(CAGACC)n	Simple_repeat	1	150	(0)	1889184
1379	16.4	16.1	0.0	chr19	48633001	48633244	(9984372)	C	AluJb	SINE/Alu	(19)	293	3	1889247
13	30.2	0.0	4.5	chr19	48634580	48634645	(9982971)	+	(CCCGCC)n	Simple_repeat	1	66	(0)	1889251
14	21.7	0.0	10.3	chr19	48646681	48646758	(9970858)	+	(GGAGCG)n	Simple_repeat	1	78	(0)	1889273
14	16.9	2.3	4.4	chr19	48714440	48714483	(9903133)	+	(CGCGG)n	Simple_repeat	1	45	(0)	1889450
13	18.7	0.0	5.0	chr19	48714563	48714602	(9903014)	+	G-rich	Low_complexity	1	40	(0)	1889451
294	27.5	0.0	3.8	chr19	48714643	48714748	(9902868)	C	MSR1	Satellite	(7)	104	3	1889452
25	12.8	3.9	0.0	chr19	48716738	48716788	(9900828)	+	GA-rich	Low_complexity	1	53	(0)	1889456
40	27.3	1.3	3.3	chr19	49153495	49153643	(9463973)	+	(CTC)n	Simple_repeat	1	151	(0)	1890480
236	23.5	0.0	6.4	chr19	49425835	49425943	(9191673)	+	MSR1	Satellite	8	109	(2)	1891080
226	31.6	2.0	3.0	chr19	49446014	49446114	(9171502)	C	L2	LINE/L2	(492)	2927	2828	1891109
260	23.9	0.0	5.4	chr19	49449375	49449467	(9168149)	C	MSR1	Satellite	(0)	111	24	1891113
442	20.0	0.0	0.1	chr19	49637861	49637957	(8979659)	+	MIRc	SINE/MIR	72	167	(95)	1891592
2154	11.6	1.7	0.0	chr19	50316460	50316751	(8300865)	+	AluSx1	SINE/Alu	2	298	(14)	1893260
13	21.9	3.5	5.0	chr19	50494902	50494959	(8122657)	+	GA-rich	Low_complexity	1	60	(0)	1893643
211	17.1	0.0	0.0	chr19	50495125	50495159	(8122457)	+	L2b	LINE/L2	3328	3362	(13)	1893638
192	18.9	0.0	0.0	chr19	50495243	50495279	(8122337)	+	L2b	LINE/L2	3371	3407	(19)	1893638
24	22.3	0.0	0.0	chr19	50960303	50960360	(7657256)	+	(TCTCTG)n	Simple_repeat	1	58	(0)	1894702
1616	11.9	0.8	3.3	chr19	50960589	50960759	(7656857)	C	AluSx3	SINE/Alu	(7)	304	137	1894703
649	27.3	1.0	3.0	chr19	51350074	51350273	(7267343)	C	L2a	LINE/L2	(207)	3219	3024	1895437
190	26.7	3.2	4.8	chr19	51350352	51350414	(7267202)	+	L3	LINE/CR1	3141	3202	(897)	1895438
2173	11.0	4.6	0.0	chr19	51350479	51350770	(7266846)	C	AluSx1	SINE/Alu	(6)	306	1	1895439
715	15.3	0.8	1.6	chr19	51390724	51391197	(7226419)	+	MSR1	Satellite	1	470	(0)	1895527
65	34.6	3.9	3.2	chr19	51552573	51553081	(7064535)	+	G-rich	Low_complexity	1	529	(0)	1895807
392	19.7	2.8	5.0	chr19	51692291	51692601	(6925015)	C	MSR1	Satellite	(24)	304	1	1896057
11	14.9	4.9	4.7	chr19	51692708	51692748	(6924868)	+	(TCCCTGG)n	Simple_repeat	1	43	(0)	1896058
15	4.3	0.0	3.9	chr19	51692746	51692771	(6924845)	+	(CTGT)n	Simple_repeat	1	26	(0)	1896059
480	21.4	2.8	0.0	chr19	52943094	52943196	(5674420)	+	FLAM_A	SINE/Alu	3	108	(34)	1898517
418	13.8	4.1	6.0	chr19	52943260	52943359	(5674257)	C	L1M4	LINE/L1	(1160)	4986	4889	1898518
2992	21.4	2.3	5.8	chr19	55038525	55038589	(3579027)	+	L1MB4	LINE/L1	5408	5472	(708)	1902850
2114	11.4	1.0	0.0	chr19	55038590	55038886	(3578730)	C	AluSq	SINE/Alu	(13)	300	1	1902851
53	19.1	0.8	2.5	chr19	55145303	55145420	(3472196)	+	GA-rich	Low_complexity	1	119	(0)	1903102
15	22.7	0.0	0.0	chr19	55160495	55160526	(3457090)	+	GA-rich	Low_complexity	1	32	(0)	1903121
190	28.2	16.2	1.6	chr19	55324821	55324946	(3292670)	C	L2c	LINE/L2	(58)	3329	3182	1903477
274	36.3	4.1	7.2	chr19	55453791	55454069	(3163547)	+	L2a	LINE/L2	2594	2863	(556)	1903765
255	23.3	0.0	1.6	chr19	55454319	55454379	(3163237)	+	L2b	LINE/L2	3299	3358	(17)	1903766
295	14.4	3.5	3.5	chr19	55540609	55540694	(3076922)	C	MSR1	Satellite	(8)	103	18	1903959
69	28.1	7.8	1.2	chr2	965007	965392	(241228137)	+	(TCCTCAG)n	Simple_repeat	1	416	(0)	1911769
36	15.6	6.8	1.1	chr2	3458507	3458594	(238734935)	+	(GT)n	Simple_repeat	1	94	(0)	1914498
288	33.6	11.7	0.8	chr2	6943593	6944260	(235249269)	C	L2	LINE/L2	(1703)	1716	966	1919223
76	20.4	1.7	1.1	chr2	8515797	8515971	(233677558)	+	(CCT)n	Simple_repeat	1	178	(0)	1921501
16	27.0	1.3	5.1	chr2	8569492	8569569	(233623960)	+	(CCCACAC)n	Simple_repeat	1	79	(0)	1921580
41	0.0	0.0	0.0	chr2	8622888	8622922	(233570607)	+	(AC)n	Simple_repeat	1	35	(0)	1921657
13	18.9	0.0	0.0	chr2	8623044	8623073	(233570456)	+	(CCT)n	Simple_repeat	1	30	(0)	1921658
427	25.2	7.8	1.4	chr2	9261360	9261504	(232932025)	+	MIRc	SINE/MIR	90	244	(24)	1922667
27	3.1	0.0	2.9	chr2	9400264	9400298	(232793231)	+	(CTTC)n	Simple_repeat	1	35	(0)	1922878
596	24.6	13.8	0.6	chr2	10712357	10712683	(231480846)	C	L2	LINE/L2	(2795)	624	248	1925305
334	16.2	0.0	10.5	chr2	10712802	10712818	(231480711)	C	L1MC4	LINE/L1	(0)	8042	8028	1925306
2140	15.1	0.0	0.3	chr2	10712819	10713130	(231480399)	C	AluJb	SINE/Alu	(1)	311	1	1925307
572	11.6	4.2	5.3	chr2	11330597	11330691	(230862838)	+	AluSx3	SINE/Alu	201	294	(17)	1926430
181	9.4	0.5	7.7	chr2	11330692	11331067	(230862462)	+	GA-rich	Low_complexity	1	378	(0)	1926431
27	19.1	3.6	3.5	chr2	23658078	23658160	(218535369)	+	(CCT)n	Simple_repeat	1	86	(0)	1944663
17	10.4	4.4	4.3	chr2	26971130	26971174	(215222355)	+	(CCTCCCT)n	Simple_repeat	1	47	(0)	1950981
17	7.0	3.3	0.0	chr2	27071533	27071562	(215121967)	+	(CCACGG)n	Simple_repeat	1	31	(0)	1951129
25	16.9	4.3	2.7	chr2	28392701	28392770	(213800759)	+	(CCT)n	Simple_repeat	1	73	(0)	1953484
1642	23.0	12.2	7.8	chr2	30193281	30193855	(211999674)	+	MER45C	DNA/hAT-Tip100	1	604	(349)	1956537
1050	25.7	1.5	0.0	chr2	31050517	31050773	(211142756)	+	L1MD3	LINE/L1	7729	7989	(6)	1957894
27	19.5	3.1	5.9	chr2	39437114	39437211	(202756318)	+	(CGC)n	Simple_repeat	1	101	(0)	1971190
16	18.8	2.3	2.2	chr2	39437296	39437339	(202756190)	+	(CTC)n	Simple_repeat	1	45	(0)	1971191
2260	11.8	0.0	1.9	chr2	43192436	43192748	(199000781)	+	AluSx4	SINE/Alu	1	307	(3)	1977079
18	11.6	3.7	7.1	chr2	46542456	46542509	(195651020)	+	(CTC)n	Simple_repeat	1	56	(0)	1982426
237	27.9	3.7	1.2	chr2	47004233	47004312	(195189217)	+	MamTip2	DNA/hAT-Tip100	96	177	(128)	1983232
17	13.2	1.4	4.0	chr2	48530025	48530063	(193663466)	+	G-rich	Low_complexity	1	37	(0)	1986145
34	12.1	0.0	0.0	chr2	48530116	48530170	(193663359)	+	(TCC)n	Simple_repeat	1	55	(0)	1986146
13	21.7	0.0	0.0	chr2	55050321	55050352	(187143177)	+	(GCC)n	Simple_repeat	1	32	(0)	1995182
2641	23.1	7.1	7.3	chr2	60614145	60614340	(181579189)	+	L1MB3	LINE/L1	6120	6333	(1)	2002672
286	27.2	7.5	13.1	chr2	60614349	60614729	(181578800)	C	L2c	LINE/L2	(1354)	2065	1708	2002670
229	27.8	16.8	3.4	chr2	69997692	69997840	(172195689)	+	MER5B	DNA/hAT-Charlie	4	176	(2)	2018139
190	29.2	10.1	6.2	chr2	70010291	70010546	(172182983)	C	L2c	LINE/L2	(189)	3198	2932	2018170
426	32.4	3.7	7.5	chr2	70010668	70010974	(172182555)	+	L2b	LINE/L2	3076	3370	(5)	2018171
437	30.3	2.1	0.0	chr2	71684151	71684292	(170509237)	C	Arthur1A	DNA/hAT-Tip100	(3)	174	30	2021004
318	26.6	5.0	0.0	chr2	71684650	71684743	(170508786)	+	MER5A1	DNA/hAT-Charlie	15	113	(53)	2021005
475	26.9	7.8	3.4	chr2	73233800	73234007	(168959522)	+	MIRb	SINE/MIR	19	236	(32)	2023375
30	19.8	1.9	6.5	chr2	73284383	73284487	(168909042)	+	GA-rich	Low_complexity	1	107	(0)	2023446
18	9.1	5.3	2.5	chr2	73385805	73385842	(168807687)	+	(CTC)n	Simple_repeat	1	40	(0)	2023643
19	20.3	0.0	2.1	chr2	73385843	73385850	(168807679)	+	(CTCCCC)n	Simple_repeat	3	48	(0)	2023644
51	2.0	0.0	0.0	chr2	73385904	73385953	(168807576)	+	(GGA)n	Simple_repeat	1	50	(0)	2023645
12	31.9	0.0	0.0	chr2	73385981	73386030	(168807499)	+	(GAGGTG)n	Simple_repeat	1	50	(0)	2023646
13462	17.3	3.1	2.7	chr2	75240774	75243077	(166950452)	+	L1P4a	LINE/L1	5	2310	(4193)	2026682
16	7.5	0.0	3.3	chr2	84905594	84905623	(157287906)	+	(GGCGG)n	Simple_repeat	1	30	(0)	2039635
233	26.0	7.9	4.6	chr2	85415141	85415283	(156778246)	+	L2c	LINE/L2	3083	3236	(151)	2040711
650	16.8	6.7	2.6	chr2	85415368	85415560	(156777969)	C	L1ME2z	LINE/L1	(238)	6206	6006	2040712
13	12.0	4.7	6.7	chr2	85665435	85665477	(156528052)	+	(CTCC)n	Simple_repeat	1	45	(0)	2041249
34	0.0	0.0	0.0	chr2	85666494	85666522	(156527007)	+	(TG)n	Simple_repeat	1	29	(0)	2041251
13	23.0	2.0	4.0	chr2	88003239	88003287	(154190242)	+	(CTC)n	Simple_repeat	1	50	(0)	2045100
964	32.8	9.9	0.2	chr2	88087357	88087823	(154105706)	+	L2a	LINE/L2	2910	3426	(0)	2045272
13	23.5	7.3	0.0	chr2	88088083	88088137	(154105392)	+	(CCCT)n	Simple_repeat	1	59	(0)	2045273
482	29.4	3.4	2.0	chr2	88549482	88549627	(153643902)	+	MIRb	SINE/MIR	104	251	(17)	2046270
240	18.2	8.3	0.0	chr2	96894204	96894258	(145299271)	+	MIRb	SINE/MIR	115	174	(94)	2052959
166	25.8	2.6	4.2	chr2	96894280	96894930	(145298599)	+	(ACCC)n	Simple_repeat	1	668	(0)	2052960
259	27.0	10.8	6.3	chr2	100291130	100291287	(141902242)	+	L1MCc	LINE/L1	224	389	(6034)	2057668
320	25.3	9.6	6.8	chr2	100292303	100292463	(141901066)	C	L1MCc	LINE/L1	(6034)	389	224	2057670
408	28.9	5.3	6.4	chr2	100895255	100895502	(141298027)	C	MIRb	SINE/MIR	(8)	260	13	2058688
220	34.0	6.5	1.1	chr2	102065478	102065667	(140127862)	+	L2	LINE/L2	2618	2818	(601)	2060591
34	2.9	0.0	0.0	chr2	105744866	105744901	(136448628)	+	(CGC)n	Simple_repeat	1	36	(0)	2065431
14	11.2	3.5	0.0	chr2	112722338	112722366	(129471163)	+	(GGGA)n	Simple_repeat	1	30	(0)	2075636
251	32.0	10.6	2.7	chr2	113234031	113234213	(128959316)	C	L3	LINE/CR1	(131)	3968	3770	2076461
268	23.6	7.2	0.1	chr2	113234405	113234508	(128959021)	+	MIR3	SINE/MIR	83	194	(36)	2076462
2081	12.1	0.3	0.0	chr2	113234511	113234817	(128958712)	C	AluSg4	SINE/Alu	(2)	308	1	2076463
344	32.5	5.8	6.6	chr2	113240742	113241195	(128952334)	C	L2b	LINE/L2	(1)	3374	2925	2076473
139	20.8	2.5	0.9	chr2	113255004	113255323	(128938206)	+	GA-rich	Low_complexity	1	328	(0)	2076492
31	17.6	0.0	0.0	chr2	119759821	119759879	(122433650)	+	GA-rich	Low_complexity	1	59	(0)	2085916
213	28.2	8.2	0.0	chr2	120239401	120239478	(121954051)	+	L2b	LINE/L2	3284	3368	(7)	2086636
13	21.3	1.9	5.5	chr2	120252985	120253038	(121940491)	+	G-rich	Low_complexity	1	55	(0)	2086660
596	26.2	12.6	3.7	chr2	121076983	121077358	(121116171)	C	ERV3-16A3_LTR	LTR/ERVL	(0)	422	9	2088004
384	18.0	21.6	5.1	chr2	126971826	126972001	(115221528)	+	MLT1H2	LTR/ERVL-MaLR	277	489	(0)	2096674
14	19.7	2.3	2.3	chr2	127064658	127064700	(115128829)	+	(GAGCAGG)n	Simple_repeat	1	44	(0)	2096829
15	18.6	0.0	6.2	chr2	129827421	129827426	(112366103)	+	(GCGG)n	Simple_repeat	1	44	(0)	2100930
13	24.8	0.0	0.0	chr2	129827427	129827464	(112366065)	+	(GGAGCG)n	Simple_repeat	1	38	(0)	2100931
184	39.2	3.2	6.7	chr2	129827775	129827938	(112365591)	C	L2	LINE/L2	(576)	2843	2686	2100932
224	28.9	0.0	0.0	chr2	131106399	131106450	(111087079)	C	MIR3	SINE/MIR	(101)	107	56	2102845
385	33.5	5.9	1.1	chr2	131106684	131106861	(111086668)	+	L2b	LINE/L2	3180	3366	(9)	2102846
13	14.8	8.5	2.0	chr2	135985449	135985495	(106208034)	+	(CTGGACA)n	Simple_repeat	1	51	(0)	2109962
13	7.2	6.5	3.0	chr2	148644959	148644989	(93548540)	+	(CCG)n	Simple_repeat	1	33	(0)	2126932
15	24.1	1.4	6.8	chr2	151828341	151828412	(90365117)	+	(GCC)n	Simple_repeat	1	73	(0)	2131422
538	30.0	11.1	8.3	chr2	151998965	151999472	(90194057)	C	HAL1ME	LINE/L1	(1931)	534	11	2131673
15	8.8	5.0	4.8	chr2	156436293	156436332	(85757197)	+	G-rich	Low_complexity	1	42	(0)	2137474
23	32.0	0.0	2.2	chr2	157876292	157876383	(84317146)	+	GA-rich	Low_complexity	1	92	(0)	2139335
423	27.2	15.4	8.2	chr2	168208631	168209007	(73984522)	+	MLT1I	LTR/ERVL-MaLR	1	409	(2)	2153219
3724	8.5	6.2	0.2	chr2	169839868	169840412	(72353117)	C	LTR19B	LTR/ERV1	(0)	580	1	2155717
6104	21.6	8.1	6.6	chr2	169840413	169841348	(72352181)	C	MLT1A1-int	LTR/ERVL-MaLR	(439)	1296	377	2155714
12	9.8	0.0	11.9	chr2	170771318	170771359	(71422170)	+	(GGCCCCG)n	Simple_repeat	1	42	(0)	2157213
3451	13.4	3.5	1.0	chr2	171432770	171433357	(70760172)	C	MER6A	DNA/TcMar-Tigger	(2)	603	1	2158426
303	25.8	4.9	1.0	chr2	172106021	172106118	(70087411)	C	MIRc	SINE/MIR	(66)	202	101	2159598
18	0.0	0.0	0.0	chr2	173964685	173964706	(68228823)	+	(CGG)n	Simple_repeat	1	22	(0)	2162459
35	18.5	6.0	3.2	chr2	173964709	173964825	(68228704)	+	(CCT)n	Simple_repeat	1	124	(0)	2162460
27	27.8	4.9	3.5	chr2	173964826	173964867	(68228662)	+	(CTCCCCT)n	Simple_repeat	4	170	(0)	2162461
12	17.1	2.9	2.8	chr2	173964835	173964869	(68228660)	+	(CGCT)n	Simple_repeat	1	36	(0)	2162462
1835	9.1	0.4	3.6	chr2	178413242	178413494	(63780035)	C	AluSp	SINE/Alu	(67)	246	2	2169048
26	13.6	5.8	2.7	chr2	181891874	181891942	(60301587)	+	(CCTCCT)n	Simple_repeat	1	73	(0)	2173262
25	26.4	0.0	4.4	chr2	181891943	181891962	(60301567)	+	(CCCTCC)n	Simple_repeat	2	90	(0)	2173263
21	8.9	0.0	2.6	chr2	181892203	181892211	(60301318)	+	(CGAGGA)n	Simple_repeat	1	37	(0)	2173264
18	7.6	0.0	0.0	chr2	181892212	181892239	(60301290)	+	(AGG)n	Simple_repeat	1	28	(0)	2173265
49	20.2	3.3	5.9	chr2	223837625	223837804	(18355725)	+	(CCT)n	Simple_repeat	1	186	(0)	2234959
36	2.7	0.0	0.0	chr2	224585163	224585200	(17608329)	+	(GCG)n	Simple_repeat	1	38	(0)	2236169
13	5.3	0.0	0.0	chr2	224585308	224585327	(17608202)	+	(GGC)n	Simple_repeat	1	20	(0)	2236170
22	9.4	0.0	0.0	chr2	224585356	224585389	(17608140)	+	(TCC)n	Simple_repeat	1	34	(0)	2236171
25	20.4	0.0	6.1	chr2	224585412	224585493	(17608036)	+	G-rich	Low_complexity	1	82	(0)	2236172
26	0.0	0.0	0.0	chr2	230658808	230658832	(11534697)	+	(GAGCAG)n	Simple_repeat	1	25	(0)	2245460
778	14.1	8.9	11.3	chr2	231015197	231015381	(11178148)	C	AluSx3	SINE/Alu	(131)	180	1	2246073
126	18.5	0.0	0.4	chr2	232333089	232333328	(9860201)	+	(CCT)n	Simple_repeat	1	240	(0)	2248510
24	7.7	0.0	4.4	chr2	233470133	233470177	(8723352)	+	(CTCCTCC)n	Simple_repeat	1	45	(0)	2250553
285	11.9	1.5	6.9	chr2	235301620	235302272	(6891257)	+	(CCT)n	Simple_repeat	1	663	(0)	2253359
13	18.8	4.5	2.2	chr2	235495003	235495046	(6698483)	+	(GCCGC)n	Simple_repeat	1	46	(0)	2253736
13	4.1	3.5	6.7	chr2	239106566	239106594	(3086935)	+	(CTC)n	Simple_repeat	1	30	(0)	2258594
248	26.7	4.2	0.0	chr2	239294757	239294858	(2898671)	+	MIRb	SINE/MIR	111	219	(43)	2258767
2795	2.3	0.0	0.0	chr2	239295026	239295335	(2898194)	+	AluYa5	SINE/Alu	1	310	(1)	2258768
48	2.1	0.0	0.0	chr2	240757409	240757456	(1436073)	+	(TCC)n	Simple_repeat	1	48	(0)	2260343
226	31.0	14.1	1.4	chr20	768861	769076	(63675091)	+	L2b	LINE/L2	3037	3284	(91)	2263716
180	17.6	5.6	1.9	chr20	1298157	1298208	(63145959)	+	MIRc	SINE/MIR	103	156	(112)	2264773
259	29.4	8.7	1.6	chr20	1298529	1298656	(63145511)	C	Chap1_Mam	DNA/hAT-Charlie	(203)	139	2	2264774
31	22.5	0.0	0.0	chr20	3784871	3784942	(60659225)	+	(TCA)n	Simple_repeat	1	72	(0)	2269487
234	31.9	6.4	3.0	chr20	3816401	3816565	(60627602)	+	L2c	LINE/L2	3021	3191	(196)	2269554
214	27.0	3.8	5.7	chr20	3816798	3816903	(60627264)	+	MIRc	SINE/MIR	43	146	(122)	2269555
1856	13.7	0.0	6.8	chr20	4685224	4685545	(59758622)	C	AluJo	SINE/Alu	(11)	301	2	2271154
1953	15.8	2.1	8.2	chr20	5056695	5056787	(59387380)	C	MLT1B	LTR/ERVL-MaLR	(295)	95	4	2271902
1956	22.9	3.5	2.0	chr20	5056788	5057192	(59386975)	+	LTR16A1	LTR/ERVL	45	456	(0)	2271899
389	17.9	0.0	0.0	chr20	5057193	5057259	(59386908)	C	AluJo	SINE/Alu	(13)	299	233	2271903
402	32.8	1.1	9.7	chr20	5057260	5057339	(59386828)	+	L3b	LINE/CR1	3186	3263	(836)	2271904
790	13.4	10.5	0.0	chr20	5057340	5057458	(59386709)	+	FLAM_C	SINE/Alu	1	133	(10)	2271905
278	21.5	9.3	1.8	chr20	20638296	20638404	(43805763)	C	Charlie17a	DNA/hAT-Charlie	(0)	217	100	2295849
12	21.2	6.2	4.3	chr20	22584428	22584492	(41859675)	+	G-rich	Low_complexity	1	69	(0)	2298602
63	7.9	1.1	1.0	chr20	22584622	22584716	(41859451)	+	(GGA)n	Simple_repeat	1	96	(0)	2298603
16	17.8	9.0	2.7	chr20	22584853	22584919	(41859248)	+	(GCC)n	Simple_repeat	1	73	(0)	2298604
25	22.1	1.1	5.6	chr20	32585036	32585149	(31859018)	+	(GGC)n	Simple_repeat	1	108	(0)	2308739
14	12.5	0.0	0.0	chr20	32585127	32585152	(31859015)	+	(CCT)n	Simple_repeat	1	26	(0)	2308740
16	19.2	4.1	2.0	chr20	32585205	32585253	(31858914)	+	G-rich	Low_complexity	1	51	(0)	2308741
22	28.1	0.0	0.0	chr20	32585320	32585396	(31858771)	+	(CTC)n	Simple_repeat	1	77	(0)	2308742
17	8.9	5.3	2.5	chr20	32585468	32585505	(31858662)	+	(GCCCG)n	Simple_repeat	1	40	(0)	2308743
2358	4.1	0.0	4.4	chr20	33862260	33862578	(30581589)	C	AluYm1	SINE/Alu	(5)	306	2	2311778
15	26.6	0.0	0.0	chr20	35171904	35171948	(29272219)	+	GA-rich	Low_complexity	1	45	(0)	2314694
14	6.0	4.8	9.1	chr20	35171998	35172039	(29272128)	+	(CCT)n	Simple_repeat	1	44	(0)	2314695
16	16.9	0.0	4.5	chr20	36173597	36173640	(28270527)	+	(CCTCCCT)n	Simple_repeat	1	44	(0)	2317028
17	26.8	1.4	4.1	chr20	36461263	36461334	(27982833)	+	(GGCC)n	Simple_repeat	1	73	(0)	2317683
15	7.8	0.0	3.5	chr20	36461410	36461438	(27982729)	+	(GGGGC)n	Simple_repeat	1	29	(0)	2317684
27	28.0	1.0	2.9	chr20	36461591	36461691	(27982476)	+	(GCCCG)n	Simple_repeat	1	102	(0)	2317685
13	21.4	3.9	3.7	chr20	36843429	36843480	(27600687)	+	(CCA)n	Simple_repeat	1	54	(0)	2318595
28	18.4	0.9	9.7	chr20	37345991	37346102	(27098065)	+	(TCC)n	Simple_repeat	1	113	(0)	2319802
12	13.0	11.9	0.0	chr20	37346084	37346125	(27098042)	+	(CTCTCT)n	Simple_repeat	1	47	(0)	2319803
17	34.2	2.4	0.0	chr20	37346169	37346252	(27097915)	+	(CCGT)n	Simple_repeat	1	86	(0)	2319804
23	2.3	3.8	9.1	chr20	37903028	37903080	(26541087)	+	GA-rich	Low_complexity	1	55	(0)	2321017
26	21.7	2.4	3.5	chr20	37903169	37903253	(26540914)	+	G-rich	Low_complexity	1	87	(0)	2321018
221	23.9	1.8	10.2	chr20	37939691	37939792	(26504375)	+	L2c	LINE/L2	3284	3386	(1)	2321116
12	15.2	2.4	7.0	chr20	37939854	37939895	(26504272)	+	(CCTC)n	Simple_repeat	1	43	(0)	2321117
13	0.0	17.6	0.0	chr20	39048140	39048173	(25395994)	+	(GTCCTGA)n	Simple_repeat	1	40	(0)	2323390
24	35.8	2.1	2.1	chr20	44258680	44258834	(20185333)	+	(CT)n	Simple_repeat	1	155	(0)	2333035
187	29.3	0.0	7.1	chr20	44701243	44701341	(19742826)	+	L2b	LINE/L2	2995	3086	(289)	2334126
291	12.8	1.1	3.0	chr20	45305334	45305401	(19138766)	C	MIR3	SINE/MIR	(62)	146	82	2335355
71	5.6	1.1	0.0	chr20	46022940	46023034	(18421133)	+	(GAG)n	Simple_repeat	1	96	(0)	2336808
249	22.4	1.7	1.7	chr20	46023120	46023178	(18420989)	C	MIR3	SINE/MIR	(37)	171	113	2336809
236	31.0	4.4	0.0	chr20	46348676	46348762	(18095405)	+	MIR3	SINE/MIR	88	178	(30)	2337512
798	20.6	11.3	0.0	chr20	46348767	46348955	(18095212)	+	MER58A	DNA/hAT-Charlie	9	221	(3)	2337513
15	22.5	0.0	2.3	chr20	49631619	49631661	(14812506)	+	(CCT)n	Simple_repeat	1	43	(0)	2344942
180	35.5	4.4	1.9	chr20	49631821	49631975	(14812192)	+	L2c	LINE/L2	2410	2568	(851)	2344943
214	23.9	12.3	0.0	chr20	50042916	50042986	(14401181)	+	MIRc	SINE/MIR	45	125	(143)	2345939
2051	13.9	0.3	5.6	chr20	50557661	50557997	(13886170)	C	7SLRNA	srpRNA	(0)	320	2	2347212
788	20.4	0.0	0.0	chr20	50557999	50558130	(13886037)	C	AluJb	SINE/Alu	(176)	136	5	2347210
2227	11.2	0.7	0.7	chr20	50662813	50663116	(13781051)	+	AluSz	SINE/Alu	1	304	(8)	2347410
244	25.8	2.9	0.0	chr20	50663118	50663183	(13780984)	+	MER112	DNA/hAT-Charlie	7	74	(187)	2347411
281	31.4	4.0	4.0	chr20	50663427	50663552	(13780615)	+	MIRb	SINE/MIR	109	234	(34)	2347412
376	30.4	0.8	2.3	chr20	51028665	51028792	(13415375)	C	L2c	LINE/L2	(6)	3381	3256	2348249
14	5.0	0.0	0.0	chr20	51541440	51541460	(12902707)	+	(TCC)n	Simple_repeat	1	21	(0)	2349346
239	25.5	0.0	0.0	chr20	53161090	53161140	(11283027)	C	MLT1N2	LTR/ERVL-MaLR	(17)	545	495	2352907
320	34.0	12.8	2.4	chr20	53161154	53161431	(11282736)	C	L2b	LINE/L2	(212)	3163	2850	2352908
2271	13.6	3.1	1.6	chr20	53161432	53161806	(11282361)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2352909
233	22.4	17.7	1.8	chr20	58267688	58267796	(6176371)	C	L2b	LINE/L2	(4)	3371	3242	2362663
330	23.2	4.2	0.0	chr20	58710930	58710998	(5733169)	+	MER5A	DNA/hAT-Charlie	56	127	(62)	2363369
49	7.8	3.5	2.2	chr20	58711050	58711135	(5733032)	+	(TCC)n	Simple_repeat	1	89	(0)	2363370
839	13.7	0.0	6.1	chr20	60715062	60715192	(3728975)	C	AluJr	SINE/Alu	(189)	123	1	2366368
298	25.2	12.2	0.0	chr20	60715526	60715676	(3728491)	+	LTR16	LTR/ERVL	242	413	(25)	2366369
417	23.0	6.0	0.8	chr20	62409820	62409946	(2034221)	C	MER5A	DNA/hAT-Charlie	(5)	184	51	2368525
29	27.8	0.9	3.5	chr20	62804889	62805000	(1639167)	+	GA-rich	Low_complexity	1	113	(0)	2368971
17	5.4	2.1	10.2	chr20	63154452	63154499	(1289668)	+	GA-rich	Low_complexity	1	49	(0)	2369323
149	13.7	5.8	1.4	chr20	63154637	63154964	(1289203)	+	(CCTCCCT)n	Simple_repeat	1	347	(0)	2369324
1112	23.5	14.2	0.0	chr20	63261780	63262128	(1182039)	C	MLT1A1	LTR/ERVL-MaLR	(1)	407	1	2369431
2298	9.7	0.0	1.0	chr20	63864482	63864792	(579375)	+	AluSq2	SINE/Alu	6	313	(0)	2370148
580	23.9	10.1	4.5	chr20	63973530	63973907	(470260)	+	MLT1D	LTR/ERVL-MaLR	29	451	(16)	2370315
539	26.9	6.4	3.0	chr20	64179245	64179528	(264639)	C	L1MB7	LINE/L1	(344)	7538	7209	2370572
15	21.6	2.2	2.2	chr20	64327709	64327753	(116414)	+	(GGC)n	Simple_repeat	1	46	(0)	2370734
30	9.3	2.2	0.0	chr21	8990441	8990486	(37719497)	+	(CA)n	Simple_repeat	1	47	(0)	2374110
3013	14.4	4.6	1.3	chr21	14841026	14841573	(31868410)	C	LTR1A2	LTR/ERV1	(2)	835	269	2378360
1519	15.3	7.5	6.1	chr21	14842179	14842569	(31867414)	C	LTR1A2	LTR/ERV1	(440)	397	1	2378361
709	22.8	15.0	6.9	chr21	32185232	32185650	(14524333)	+	LTR79	LTR/ERVL	69	527	(0)	2402799
152	2.8	0.0	0.0	chr21	32771844	32771990	(13937993)	+	(GA)n	Simple_repeat	1	147	(0)	2403728
12	23.7	2.5	0.0	chr21	32772205	32772244	(13937739)	+	GA-rich	Low_complexity	1	41	(0)	2403729
1002	28.0	2.6	1.5	chr21	37270276	37270540	(9439443)	+	LTR16A	LTR/ERVL	5	272	(179)	2411270
1466	20.4	18.0	1.5	chr21	37270542	37271013	(9438970)	C	MLT1F1	LTR/ERVL-MaLR	(1)	568	2	2411271
28	6.0	0.0	0.0	chr21	37367944	37367978	(9342005)	+	(TCC)n	Simple_repeat	1	35	(0)	2411474
19	11.9	4.1	3.9	chr21	37368074	37368122	(9341861)	+	G-rich	Low_complexity	1	51	(0)	2411475
12	22.8	6.9	1.6	chr21	37368099	37368156	(9341827)	+	(CGGCCG)n	Simple_repeat	1	62	(0)	2411476
133	16.3	2.9	6.2	chr21	37712436	37712812	(8997171)	+	(TCCTCCC)n	Simple_repeat	1	388	(0)	2412013
246	23.5	12.8	0.0	chr21	37757792	37757859	(8952124)	C	MIRc	SINE/MIR	(162)	106	29	2412078
60	22.7	2.3	5.4	chr21	38805637	38805854	(7904129)	+	(CCCCT)n	Simple_repeat	1	223	(0)	2413543
28	3.3	0.0	0.0	chr21	38805860	38805890	(7904093)	+	(TCCCTCC)n	Simple_repeat	1	31	(0)	2413544
1805	12.8	1.1	0.0	chr21	39349731	39349988	(7359995)	C	AluJb	SINE/Alu	(22)	290	30	2414412
1440	13.9	3.8	0.9	chr21	39388093	39388322	(7321661)	+	AluSz	SINE/Alu	1	237	(75)	2414500
492	25.5	12.7	0.5	chr21	39388339	39388539	(7321444)	C	L1MC4	LINE/L1	(283)	7759	7531	2414501
17	20.9	4.7	3.0	chr21	41684453	41684516	(5025467)	+	G-rich	Low_complexity	1	67	(0)	2417859
235	22.6	4.5	1.2	chr21	41684674	41684758	(5025225)	C	HAL1ME	LINE/L1	(13)	2452	2365	2417860
2204	21.5	3.8	3.9	chr21	41932055	41932664	(4777319)	+	MER21C	LTR/ERVL	297	905	(33)	2418185
13	19.5	0.0	2.7	chr21	43719258	43719294	(2990689)	+	(CCCGG)n	Simple_repeat	1	37	(0)	2420697
14	18.2	0.0	0.0	chr21	43728590	43728620	(2981363)	+	(TGTC)n	Simple_repeat	1	31	(0)	2420708
33	18.5	2.3	3.4	chr21	43884217	43884303	(2825680)	+	(CTC)n	Simple_repeat	1	89	(0)	2420982
280	20.9	1.5	0.0	chr21	44299424	44299490	(2410493)	C	L1ME3A	LINE/L1	(29)	6144	6077	2421589
18	13.6	4.9	0.0	chr21	44299576	44299616	(2410367)	+	G-rich	Low_complexity	1	43	(0)	2421590
402	22.6	3.9	0.8	chr21	44874843	44874967	(1835016)	+	LTR24B	LTR/ERV1	438	566	(10)	2422272
1705	16.8	3.4	0.6	chr21	44875114	44875455	(1834528)	+	ERV24B_Prim-int	LTR/ERV1	170	521	(7092)	2422273
3334	16.1	5.3	0.9	chr21	44875454	44876122	(1833861)	+	ERV24B_Prim-int	LTR/ERV1	851	1550	(6063)	2422273
33	7.1	4.9	1.6	chr21	44895862	44895923	(1814060)	+	(AAATA)n	Simple_repeat	1	64	(0)	2422293
253	29.0	11.6	0.0	chr21	44896135	44896241	(1813742)	C	MER63D	DNA/hAT-Blackjack	(705)	356	236	2422294
550	31.5	0.9	4.7	chr21	45060598	45060830	(1649153)	+	MER45C	DNA/hAT-Tip100	728	951	(2)	2422472
290	26.5	9.3	1.8	chr21	45388737	45388905	(1321078)	+	LTR33	LTR/ERVL	129	311	(204)	2422813
247	31.7	2.4	0.8	chr21	45389196	45389319	(1320664)	+	LTR33	LTR/ERVL	369	494	(21)	2422813
368	36.8	11.9	2.4	chr21	45389322	45389383	(1320600)	C	L1M5	LINE/L1	(1041)	5105	5052	2422814
2312	11.6	0.3	0.0	chr21	45389384	45389693	(1320290)	C	AluSc8	SINE/Alu	(0)	311	1	2422815
30	13.1	0.0	0.0	chr21	45414038	45414087	(1295896)	+	(GGA)n	Simple_repeat	1	50	(0)	2422839
192	23.9	4.2	0.0	chr21	45439764	45439809	(1270174)	+	L2b	LINE/L2	3310	3357	(18)	2422854
684	25.1	16.3	1.2	chr21	45811195	45811543	(898440)	C	MLT1E2	LTR/ERVL-MaLR	(30)	475	74	2423220
203	30.6	6.7	0.0	chr21	45943637	45943747	(766236)	C	L2a	LINE/L2	(255)	3171	3053	2423344
574	23.4	11.4	1.2	chr21	46457931	46458103	(251880)	C	LTR16A	LTR/ERVL	(0)	451	259	2423977
21	16.0	4.1	0.0	chr22	16601252	16601300	(34217168)	+	(CCGGAG)n	Simple_repeat	1	51	(0)	2427582
12	22.7	0.0	0.0	chr22	16718087	16718118	(34100350)	+	(CTTTC)n	Simple_repeat	1	32	(0)	2427720
181	33.8	9.4	3.3	chr22	16809616	16809765	(34008703)	+	L2a	LINE/L2	1892	2051	(1368)	2427847
1645	19.1	2.4	0.3	chr22	16809770	16810051	(34008417)	C	AluJb	SINE/Alu	(24)	288	1	2427848
860	32.4	9.8	0.7	chr22	16810104	16810554	(34007914)	+	L2a	LINE/L2	2268	2764	(655)	2427847
38	17.1	0.0	0.0	chr22	17831864	17831935	(32986533)	+	(CTC)n	Simple_repeat	1	72	(0)	2429788
21	6.9	0.0	0.0	chr22	17832059	17832089	(32986379)	+	(CTC)n	Simple_repeat	1	31	(0)	2429789
1513	15.8	11.9	1.4	chr22	17915810	17916088	(32902380)	+	AluJr	SINE/Alu	1	312	(0)	2429880
13	7.4	0.0	8.8	chr22	17916091	17916124	(32902344)	+	A-rich	Low_complexity	1	34	(0)	2429881
1219	27.1	10.2	4.9	chr22	17916199	17916874	(32901594)	+	L2a	LINE/L2	1578	2293	(1126)	2429882
218	32.1	6.7	0.0	chr22	19056698	19056781	(31761687)	C	MIRc	SINE/MIR	(65)	203	114	2431366
186	33.9	3.0	0.0	chr22	19148439	19148503	(31669965)	C	MIR3	SINE/MIR	(28)	180	114	2431507
12	7.6	3.1	6.1	chr22	19170406	19170437	(31648031)	+	(TTCATC)n	Simple_repeat	1	33	(0)	2431567
203	29.8	1.7	0.0	chr22	19174075	19174131	(31644337)	C	MIRb	SINE/MIR	(0)	268	211	2431570
23	25.8	6.0	4.4	chr22	19175759	19175909	(31642559)	+	(GGCACAG)n	Simple_repeat	1	160	(0)	2431571
12	7.2	6.5	3.0	chr22	19177756	19177786	(31640682)	+	(CCACGG)n	Simple_repeat	1	33	(0)	2431572
12	25.1	0.0	4.3	chr22	19178802	19178847	(31639621)	+	(CCCGC)n	Simple_repeat	1	46	(0)	2431574
13	9.1	8.1	2.5	chr22	19178948	19178984	(31639484)	+	G-rich	Low_complexity	1	40	(0)	2431575
1655	27.8	17.7	2.6	chr22	19197375	19198893	(31619575)	+	L2a	LINE/L2	1612	3422	(4)	2431600
190	37.9	16.0	3.1	chr22	19201805	19202472	(31615996)	+	L2a	LINE/L2	699	1468	(1951)	2431602
501	22.5	6.3	8.8	chr22	19292177	19292501	(31525967)	+	Tigger3	DNA/TcMar-Tigger	5	322	(26)	2431744
327	28.4	12.9	1.3	chr22	19347201	19347425	(31471043)	+	L1MEh	LINE/L1	806	1060	(1405)	2431855
47	27.5	3.6	3.9	chr22	19431483	19431707	(31386761)	+	(GCC)n	Simple_repeat	1	233	(0)	2431996
13	18.3	2.6	2.5	chr22	19431815	19431853	(31386615)	+	G-rich	Low_complexity	1	40	(0)	2431997
206	26.4	6.7	10.7	chr22	19493974	19494113	(31324355)	C	MIRb	SINE/MIR	(128)	140	7	2432100
444	31.8	3.9	0.7	chr22	19515706	19515854	(31302614)	+	MIRb	SINE/MIR	23	176	(92)	2432126
227	26.4	0.0	0.0	chr22	19515853	19515905	(31302563)	C	L2b	LINE/L2	(0)	3375	3323	2432127
253	21.6	0.0	0.0	chr22	19515931	19515981	(31302487)	+	MER81	DNA/hAT-Blackjack	61	111	(3)	2432128
12	15.3	3.5	0.0	chr22	19592785	19592813	(31225655)	+	(GGCCT)n	Simple_repeat	1	30	(0)	2432281
226	33.6	3.3	3.3	chr22	19592863	19593013	(31225455)	+	L1MEc	LINE/L1	78	228	(6172)	2432282
190	24.6	2.7	7.6	chr22	19622753	19622831	(31195637)	C	L3	LINE/CR1	(71)	4028	3954	2432328
53	0.0	0.0	0.0	chr22	19622909	19622953	(31195515)	+	(GT)n	Simple_repeat	1	45	(0)	2432329
2208	15.8	6.4	5.0	chr22	19627630	19627680	(31190788)	C	L1MB3	LINE/L1	(0)	6183	6141	2432339
2204	9.4	0.0	0.7	chr22	19628880	19629178	(31189290)	+	AluSx1	SINE/Alu	3	299	(13)	2432344
1088	14.4	4.9	6.7	chr22	19629179	19629267	(31189201)	C	L1MA4	LINE/L1	(185)	6115	6038	2432343
272	35.3	9.5	4.5	chr22	19642537	19643108	(31175360)	C	L1ME3G	LINE/L1	(3)	6121	5520	2432365
1092	27.0	13.8	6.8	chr22	19667183	19667217	(31151251)	C	MLT1F2	LTR/ERVL-MaLR	(1)	559	525	2432396
5563	10.4	3.6	3.4	chr22	19667218	19668050	(31150418)	+	LTR1A2	LTR/ERV1	3	837	(0)	2432397
378	28.5	2.3	3.9	chr22	19696601	19696822	(31121646)	+	MLT1F	LTR/ERVL-MaLR	5	228	(351)	2432446
541	20.0	4.7	2.1	chr22	19697120	19697263	(31121205)	+	MLT1F	LTR/ERVL-MaLR	348	540	(8)	2432446
13	11.2	3.2	3.1	chr22	19723472	19723502	(31094966)	+	G-rich	Low_complexity	1	32	(0)	2432483
20	22.0	4.7	4.4	chr22	19724293	19724378	(31094090)	+	(GCT)n	Simple_repeat	1	90	(0)	2432484
353	31.7	9.0	0.0	chr22	19736456	19736597	(31081871)	C	MIR3	SINE/MIR	(21)	187	32	2432490
12	4.1	3.5	6.7	chr22	19741939	19741967	(31076501)	+	(CCCAG)n	Simple_repeat	1	30	(0)	2432495
239	28.1	3.5	1.2	chr22	19742053	19742135	(31076333)	C	MIR3	SINE/MIR	(46)	162	78	2432496
239	31.7	0.0	12.9	chr22	19742534	19742649	(31075819)	+	MIRc	SINE/MIR	56	156	(112)	2432497
229	27.0	4.5	0.0	chr22	19744127	19744189	(31074279)	+	L3	LINE/CR1	3916	3981	(118)	2432499
17	19.5	4.3	0.0	chr22	19756902	19756948	(31061520)	+	G-rich	Low_complexity	1	49	(0)	2432506
1832	14.1	4.1	1.1	chr22	19815589	19815872	(31002596)	C	AluJb	SINE/Alu	(18)	294	2	2432565
309	25.0	2.7	0.0	chr22	19815873	19815944	(31002524)	C	L1MC4	LINE/L1	(4)	7878	7805	2432566
435	29.0	18.1	2.0	chr22	19868565	19868856	(30949612)	C	L2c	LINE/L2	(13)	3374	3026	2432637
16	20.3	2.9	0.0	chr22	19900332	19900375	(30918093)	+	(CA)n	Simple_repeat	1	45	(0)	2432660
2358	10.1	0.0	0.0	chr22	19900469	19900765	(30917703)	+	AluYj4	SINE/Alu	1	297	(14)	2432661
2280	10.4	0.0	1.0	chr22	19953284	19953592	(30864876)	C	AluSx3	SINE/Alu	(5)	306	1	2432738
203	25.3	2.5	11.2	chr22	19955622	19955710	(30862758)	+	L2b	LINE/L2	3199	3279	(96)	2432742
17	13.4	7.8	1.8	chr22	19957653	19957703	(30860765)	+	(CATGTG)n	Simple_repeat	1	55	(0)	2432748
1008	19.9	1.9	3.0	chr22	19957833	19958101	(30860367)	C	L1MB4	LINE/L1	(322)	5858	5593	2432749
200	31.5	5.2	2.3	chr22	19975025	19975154	(30843314)	+	L2b	LINE/L2	2959	3092	(283)	2432765
191	32.3	15.2	2.9	chr22	20022109	20022280	(30796188)	C	MIRc	SINE/MIR	(49)	219	23	2432802
1952	10.6	0.0	11.1	chr22	20025052	20025392	(30793076)	C	AluSx	SINE/Alu	(9)	303	1	2432805
2450	8.4	0.0	0.0	chr22	20079278	20079585	(30738883)	+	AluSx1	SINE/Alu	1	308	(4)	2432892
1911	13.4	1.0	2.6	chr22	20079586	20079708	(30738760)	C	AluJr	SINE/Alu	(190)	122	1	2432891
18	20.3	4.5	2.9	chr22	20084326	20084391	(30734077)	+	(GCATGT)n	Simple_repeat	1	69	(0)	2432897
11	6.3	11.4	2.6	chr22	20088684	20088718	(30729750)	+	G-rich	Low_complexity	1	39	(0)	2432899
1195	17.9	7.9	0.9	chr22	20088792	20089003	(30729465)	C	AluJr	SINE/Alu	(3)	309	82	2432900
14	18.7	2.2	4.3	chr22	20117136	20117181	(30701287)	+	(CCGC)n	Simple_repeat	1	47	(0)	2432924
20	21.7	2.9	2.9	chr22	20132116	20132183	(30686285)	+	G-rich	Low_complexity	1	70	(0)	2432945
233	23.5	3.4	9.6	chr22	20175169	20175262	(30643206)	+	MLT1H1	LTR/ERVL-MaLR	384	471	(84)	2432981
13	14.9	5.1	2.4	chr22	20320632	20320670	(30497798)	+	G-rich	Low_complexity	1	41	(0)	2433109
12	19.4	12.8	1.1	chr22	20321288	20321365	(30497103)	+	(GCTGGA)n	Simple_repeat	1	88	(0)	2433110
40	0.0	0.0	0.0	chr22	20322800	20322833	(30495635)	+	(TG)n	Simple_repeat	1	34	(0)	2433115
227	27.9	6.5	0.0	chr22	20322953	20323038	(30495430)	+	LTR75	LTR/ERVL	5	96	(466)	2433116
1160	21.5	10.5	1.1	chr22	20323058	20323428	(30495040)	+	LTR75	LTR/ERVL	153	562	(0)	2433116
205	33.7	0.0	0.9	chr22	20394683	20394759	(30423709)	C	MIRc	SINE/MIR	(72)	158	84	2433233
2082	10.9	2.7	1.0	chr22	20394760	20395052	(30423416)	C	AluSz	SINE/Alu	(14)	298	1	2433234
15	14.4	2.4	4.7	chr22	20406053	20406094	(30412374)	+	(CTGCAG)n	Simple_repeat	1	43	(0)	2433251
424	30.5	3.0	0.0	chr22	20433979	20434106	(30384362)	+	MIRb	SINE/MIR	21	152	(116)	2433308
240	28.7	16.3	1.9	chr22	20472845	20473120	(30345348)	C	L2b	LINE/L2	(246)	3129	2815	2433368
226	29.4	12.5	0.8	chr22	20473393	20473519	(30344949)	C	L2b	LINE/L2	(971)	2448	2305	2433368
41	2.4	0.0	0.0	chr22	20495799	20495840	(30322628)	+	(GGGAGGC)n	Simple_repeat	1	42	(0)	2433427
113	29.2	1.3	4.4	chr22	20496137	20496610	(30321858)	+	(TCCC)n	Simple_repeat	1	480	(0)	2433428
188	20.0	2.4	0.0	chr22	20507237	20507276	(30311192)	+	L2b	LINE/L2	3330	3370	(5)	2433456
94	18.3	1.5	1.5	chr22	20564452	20564654	(30253814)	+	(CAG)n	Simple_repeat	1	206	(0)	2433561
2307	10.2	2.2	0.0	chr22	20564849	20565152	(30253316)	+	AluSx3	SINE/Alu	1	311	(0)	2433562
188	26.0	7.2	10.5	chr22	20636976	20637061	(30181407)	+	MIR1_Amn	SINE/MIR	123	205	(25)	2433664
1381	21.8	2.3	9.7	chr22	20750059	20750480	(30067988)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	2433854
412	22.3	1.9	1.9	chr22	20816524	20816645	(30001823)	+	FRAM	SINE/Alu	9	160	(6)	2433982
233	33.0	1.1	0.0	chr22	20816912	20816999	(30001469)	+	L3	LINE/CR1	3722	3810	(289)	2433983
53	0.0	0.0	0.0	chr22	20888312	20888356	(29930112)	+	(CA)n	Simple_repeat	1	45	(0)	2434139
1673	13.7	6.6	0.4	chr22	20956614	20956884	(29861584)	+	AluJb	SINE/Alu	1	289	(23)	2434317
51	0.0	0.0	0.0	chr22	20961472	20961517	(29856951)	+	(AAAT)n	Simple_repeat	1	46	(0)	2434334
297	28.5	12.8	0.8	chr22	20987779	20987902	(29830566)	+	L2b	LINE/L2	3231	3371	(4)	2434366
1020	20.5	0.5	0.5	chr22	20988292	20988476	(29829992)	+	AluJr	SINE/Alu	105	289	(23)	2434367
216	34.1	7.1	0.0	chr22	21001558	21001648	(29816820)	C	MIR	SINE/MIR	(126)	136	39	2434375
1392	7.7	0.0	0.6	chr22	21002626	21002808	(29815660)	C	AluYh3	SINE/Alu	(0)	311	130	2434376
13	21.4	8.6	3.4	chr22	21025894	21025974	(29792494)	+	(GGCA)n	Simple_repeat	1	88	(0)	2434419
341	28.7	11.3	1.2	chr22	21452114	21452367	(29366101)	C	HAL1	LINE/L1	(0)	2507	2225	2435180
2219	8.9	0.7	0.0	chr22	21582521	21582823	(29235645)	C	AluSq2	SINE/Alu	(8)	305	1	2435474
419	29.7	13.3	6.0	chr22	21588015	21588415	(29230053)	C	L3	LINE/CR1	(1657)	2442	2008	2435475
442	25.7	4.2	5.6	chr22	21677895	21678170	(29140298)	C	L2a	LINE/L2	(305)	3121	2846	2435675
2132	12.9	1.6	0.0	chr22	21678225	21678526	(29139942)	C	AluJb	SINE/Alu	(1)	311	5	2435676
2523	5.7	0.3	0.0	chr22	21692154	21692453	(29126015)	C	AluY	SINE/Alu	(10)	301	1	2435696
251	45.1	1.4	0.0	chr22	21718904	21719107	(29099361)	C	L3	LINE/CR1	(659)	3440	3234	2435746
194	31.0	2.7	0.0	chr22	21719202	21719272	(29099196)	C	L3	LINE/CR1	(1072)	3027	2955	2435746
16	0.0	0.0	0.0	chr22	21731540	21731556	(29086912)	+	(A)n	Simple_repeat	1	17	(0)	2435774
15	17.2	2.0	5.8	chr22	21735618	21735668	(29082800)	+	(CGCCCCG)n	Simple_repeat	1	52	(0)	2435785
17	20.7	5.7	2.7	chr22	21735873	21735942	(29082526)	+	(CCCGCCT)n	Simple_repeat	1	74	(0)	2435786
16	30.1	0.0	4.0	chr22	21921343	21921416	(28897052)	+	(CCCTG)n	Simple_repeat	1	74	(0)	2436224
716	13.9	0.9	0.0	chr22	21927931	21928079	(28890389)	C	AluJb	SINE/Alu	(0)	312	174	2436230
695	16.8	2.1	0.0	chr22	22230632	22230768	(28587700)	+	L1MB3	LINE/L1	6044	6183	(0)	2436624
899	19.5	1.4	6.0	chr22	22342055	22342168	(28476300)	+	L1MB4	LINE/L1	5973	6086	(94)	2436773
955	16.7	0.0	1.3	chr22	22342169	22342324	(28476144)	C	AluJo	SINE/Alu	(22)	290	137	2436774
899	19.5	1.4	6.0	chr22	22342325	22342427	(28476041)	+	L1MB4	LINE/L1	6087	6180	(0)	2436773
1469	20.7	0.0	5.2	chr22	22423896	22424204	(28394264)	+	AluJr	SINE/Alu	2	294	(18)	2436840
1782	9.9	2.0	1.6	chr22	22424326	22424577	(28393891)	+	AluSp	SINE/Alu	1	253	(60)	2436841
12	21.6	0.0	4.9	chr22	22576440	22576480	(28241988)	+	G-rich	Low_complexity	1	41	(0)	2437106
565	24.5	5.5	0.6	chr22	22761722	22761877	(28056591)	+	MLT1-int	LTR/ERVL-MaLR	1193	1356	(15)	2437351
429	36.2	7.7	1.9	chr22	22912935	22913604	(27904864)	C	L1MC5	LINE/L1	(583)	8721	8010	2437533
12	26.7	0.0	5.5	chr22	22915077	22915131	(27903337)	+	(ACAG)n	Simple_repeat	1	55	(0)	2437534
184	35.7	8.3	0.0	chr22	22931546	22931699	(27886769)	C	L2a	LINE/L2	(61)	3365	3198	2437549
5236	11.2	2.8	7.1	chr22	23026413	23027288	(27791180)	C	LTR1A2	LTR/ERV1	(0)	837	1	2437677
24584	9.5	2.2	0.6	chr22	23046972	23052748	(27765720)	+	L1PB1	LINE/L1	251	6867	(0)	2437701
396	29.6	1.4	2.7	chr22	23111587	23111732	(27706736)	C	MIR3	SINE/MIR	(35)	173	30	2437763
340	37.0	7.5	3.1	chr22	23409031	23409552	(27408916)	+	L2	LINE/L2	1931	2477	(942)	2438246
17	22.4	1.8	3.5	chr22	23533397	23533452	(27285016)	+	GA-rich	Low_complexity	1	57	(0)	2438457
12	20.8	0.0	2.9	chr22	23895552	23895586	(26922882)	+	GA-rich	Low_complexity	1	35	(0)	2439165
36	12.1	1.5	1.5	chr22	25564572	25564636	(25253832)	+	GA-rich	Low_complexity	1	66	(0)	2442496
27	29.1	6.4	1.8	chr22	27543503	27543658	(23274810)	+	(CCTT)n	Simple_repeat	1	166	(0)	2446931
471	30.7	2.8	1.6	chr22	27543661	27543918	(23274550)	+	L2b	LINE/L2	2929	3188	(199)	2446932
1250	21.5	3.1	5.1	chr22	29120559	29120891	(21697577)	+	MLT1D	LTR/ERVL-MaLR	180	505	(0)	2449924
21	3.0	2.6	5.1	chr22	29206517	29206557	(21611911)	+	(TGTT)n	Simple_repeat	1	39	(0)	2450112
236	30.8	2.1	2.1	chr22	29206767	29206859	(21611609)	C	MIRb	SINE/MIR	(59)	209	117	2450113
14	12.5	0.0	3.5	chr22	30256293	30256321	(20562147)	+	GA-rich	Low_complexity	1	29	(0)	2452244
323	27.5	13.8	1.9	chr22	30256392	30256543	(20561925)	C	MIRb	SINE/MIR	(72)	196	26	2452245
281	24.8	13.6	4.0	chr22	30256674	30256799	(20561669)	C	MIRb	SINE/MIR	(36)	232	93	2452246
462	31.4	13.1	4.4	chr22	30411762	30412096	(20406372)	C	L2c	LINE/L2	(82)	3305	2920	2452552
16	7.8	0.0	3.5	chr22	30802854	30802882	(20015586)	+	(GGCG)n	Simple_repeat	1	29	(0)	2453437
21	17.4	2.2	0.0	chr22	30803073	30803118	(20015350)	+	(GCG)n	Simple_repeat	1	47	(0)	2453438
278	32.4	5.8	0.0	chr22	35593891	35594036	(15224432)	+	MIR3	SINE/MIR	54	206	(2)	2463385
197	34.5	1.3	0.0	chr22	35594120	35594210	(15224258)	C	MIR1_Amn	SINE/MIR	(66)	164	73	2463386
205	33.2	10.6	1.0	chr22	36573818	36574012	(14244456)	C	L2b	LINE/L2	(214)	3161	2946	2465378
851	31.2	7.4	5.8	chr22	36573985	36574500	(14243968)	C	L2	LINE/L2	(409)	3010	2484	2465379
73	1.5	0.0	0.0	chr22	36703761	36703827	(14114641)	+	(CT)n	Simple_repeat	1	67	(0)	2465663
57	26.5	1.7	2.8	chr22	37075925	37076102	(13742366)	+	GA-rich	Low_complexity	1	181	(0)	2466460
343	31.4	19.4	0.5	chr22	37101208	37101399	(13717069)	C	L2a	LINE/L2	(1835)	1584	1348	2466512
469	36.0	7.2	6.0	chr22	37303920	37304333	(13514135)	C	L2c	LINE/L2	(35)	3352	2934	2466941
228	30.1	0.0	6.1	chr22	37429012	37429110	(13389358)	+	L2c	LINE/L2	3264	3356	(31)	2467214
230	23.8	4.5	0.0	chr22	37429394	37429456	(13389012)	+	MIRc	SINE/MIR	99	164	(104)	2467215
11	14.0	0.0	8.1	chr22	37675389	37675425	(13143043)	+	(GGAGAT)n	Simple_repeat	1	37	(0)	2467797
17	4.3	0.0	0.0	chr22	38075027	38075050	(12743418)	+	(GGA)n	Simple_repeat	1	24	(0)	2468747
11	25.1	0.0	4.3	chr22	38075148	38075193	(12743275)	+	(GGAGCAG)n	Simple_repeat	1	46	(0)	2468748
243	26.9	6.8	4.6	chr22	38318491	38318608	(12499860)	C	MIR3	SINE/MIR	(8)	200	79	2469247
28	6.8	0.0	5.8	chr22	38336245	38336296	(12482172)	+	(CCCGC)n	Simple_repeat	1	52	(0)	2469301
219	26.0	5.2	6.8	chr22	38353593	38353769	(12464699)	+	MIRc	SINE/MIR	22	199	(69)	2469343
266	30.8	10.3	5.1	chr22	38657204	38657340	(12161128)	+	MIRc	SINE/MIR	124	268	(0)	2470030
285	33.3	10.6	1.4	chr22	38657308	38657453	(12161015)	C	MIR	SINE/MIR	(80)	188	28	2470031
220	28.8	8.1	0.0	chr22	38657618	38657697	(12160771)	+	MIRb	SINE/MIR	132	218	(50)	2470028
43	4.0	1.9	0.0	chr22	38768686	38768737	(12049731)	+	(AAAT)n	Simple_repeat	1	53	(0)	2470236
693	20.8	16.5	0.0	chr22	38834922	38835123	(11983345)	+	MIR	SINE/MIR	2	243	(19)	2470372
11	21.4	4.4	2.1	chr22	38987243	38987287	(11831181)	+	(CTGGCC)n	Simple_repeat	1	47	(0)	2470658
12	15.3	5.3	2.5	chr22	39021600	39021637	(11796831)	+	(CCTAGC)n	Simple_repeat	1	40	(0)	2470729
15	22.0	4.8	3.1	chr22	39077451	39077512	(11740956)	+	(CCCTGC)n	Simple_repeat	1	65	(0)	2470833
13	18.1	5.3	0.0	chr22	39097408	39097445	(11721023)	+	(GCCCCA)n	Simple_repeat	1	40	(0)	2470870
38	0.0	0.0	0.0	chr22	39558969	39559001	(11259467)	+	(GT)n	Simple_repeat	1	33	(0)	2471897
13	15.9	0.0	0.0	chr22	39559002	39559029	(11259439)	+	GA-rich	Low_complexity	1	28	(0)	2471898
316	32.8	3.9	2.3	chr22	41349548	41349722	(9468746)	+	MIRb	SINE/MIR	15	192	(76)	2475715
13	17.3	7.3	0.0	chr22	42283920	42283960	(8534508)	+	GA-rich	Low_complexity	1	44	(0)	2477719
18	13.1	5.4	5.1	chr22	42284090	42284145	(8534323)	+	G-rich	Low_complexity	1	59	(0)	2477720
392	30.9	5.7	0.7	chr22	44685008	44685157	(6133311)	+	MIRb	SINE/MIR	21	178	(90)	2482426
216	33.0	9.9	0.0	chr22	44692038	44692128	(6126340)	+	MIRc	SINE/MIR	145	245	(23)	2482445
190	29.1	18.6	2.7	chr22	44692702	44692885	(6125583)	+	MIRb	SINE/MIR	15	234	(34)	2482446
1384	28.1	6.3	3.4	chr22	44947837	44948066	(5870402)	C	L1ME3	LINE/L1	(0)	6162	5931	2482936
19076	10.4	1.4	5.5	chr22	44948067	44948399	(5870069)	C	Charlie3	DNA/hAT-Charlie	(0)	2706	2379	2482937
17	21.1	4.1	0.0	chr22	45671885	45671933	(5146535)	+	(CGG)n	Simple_repeat	1	51	(0)	2484357
33	19.3	0.0	3.7	chr22	45671955	45672036	(5146432)	+	(CCT)n	Simple_repeat	1	82	(0)	2484358
13	9.8	9.1	0.0	chr22	46025621	46025653	(4792815)	+	(TGCACCC)n	Simple_repeat	1	36	(0)	2484901
347	32.6	6.8	7.7	chr22	46025780	46026105	(4792363)	+	L2c	LINE/L2	3056	3378	(9)	2484902
523	29.7	11.9	1.3	chr22	49690318	49690624	(1127844)	+	L1MD3	LINE/L1	5504	5847	(2195)	2489634
3061	29.4	9.9	3.7	chr22	49690757	49691123	(1127345)	+	L1MD3	LINE/L1	5758	6166	(1829)	2489634
353	22.9	0.0	0.0	chr3	4987358	4987440	(193308119)	C	MIR	SINE/MIR	(101)	161	79	2499900
2004	10.6	5.3	0.0	chr3	5053827	5054109	(193241450)	C	AluSz	SINE/Alu	(9)	303	5	2500089
20	32.1	3.4	1.1	chr3	9509173	9509260	(188786299)	+	(CT)n	Simple_repeat	1	91	(0)	2507312
839	9.9	0.0	0.2	chr3	9884884	9885005	(188410554)	C	FLAM_C	SINE/Alu	(0)	133	19	2508168
264	31.8	8.3	0.0	chr3	9885020	9885107	(188410452)	C	L2b	LINE/L2	(38)	3337	3242	2508169
181	23.7	0.0	0.0	chr3	9885119	9885156	(188410403)	+	MER5B	DNA/hAT-Charlie	4	41	(137)	2508170
12	5.6	0.0	0.0	chr3	10249437	10249455	(188046104)	+	(CTC)n	Simple_repeat	1	19	(0)	2509046
183	32.2	5.0	5.7	chr3	10451102	10451223	(187844336)	C	MIR3	SINE/MIR	(64)	144	24	2509433
363	34.3	10.5	0.0	chr3	10451304	10451440	(187844119)	+	MIRc	SINE/MIR	23	175	(93)	2509434
281	30.4	2.7	0.5	chr3	12445760	12445864	(185849695)	C	L2c	LINE/L2	(1)	3374	3284	2513267
1442	23.6	6.3	3.6	chr3	12445948	12446396	(185849163)	+	LTR16C	LTR/ERVL	25	486	(3)	2513268
516	28.1	14.8	1.9	chr3	12952189	12952806	(185342753)	+	L2a	LINE/L2	2373	3125	(301)	2514357
195	34.8	5.5	1.3	chr3	12952808	12952964	(185342595)	C	L2	LINE/L2	(1520)	1899	1736	2514358
180	32.3	1.6	1.6	chr3	12952992	12953054	(185342505)	C	L2	LINE/L2	(1877)	1542	1480	2514358
53	23.4	2.6	1.9	chr3	13186936	13187091	(185108468)	+	(CCTT)n	Simple_repeat	1	160	(0)	2514794
18	31.8	1.5	0.0	chr3	13187079	13187146	(185108413)	+	(CCAT)n	Simple_repeat	1	69	(0)	2514795
358	30.5	8.3	3.8	chr3	13187157	13187340	(185108219)	C	L2c	LINE/L2	(13)	3374	3182	2514796
1260	27.1	4.9	0.2	chr3	13831526	13831936	(184463623)	+	LTR16	LTR/ERVL	1	431	(7)	2515988
190	27.1	0.4	0.4	chr3	13832056	13832561	(184462998)	+	(CCT)n	Simple_repeat	1	508	(0)	2515989
328	30.9	4.7	0.0	chr3	14232962	14233084	(184062475)	+	L3	LINE/CR1	3898	4026	(73)	2516500
354	24.2	1.6	4.8	chr3	14278792	14278917	(184016642)	+	MER5A	DNA/hAT-Charlie	44	165	(24)	2516590
182	19.5	0.0	0.0	chr3	14279192	14279232	(184016327)	C	MIRc	SINE/MIR	(147)	121	81	2516591
194	33.3	0.0	6.5	chr3	14378764	14378840	(183916719)	C	L2c	LINE/L2	(27)	3360	3289	2516813
214	23.5	1.9	0.0	chr3	14378843	14378893	(183916666)	C	L2c	LINE/L2	(6)	3381	3330	2516814
14	7.2	0.0	8.6	chr3	14402533	14402567	(183892992)	+	(CCCGG)n	Simple_repeat	1	35	(0)	2516883
55	0.0	0.0	0.0	chr3	14403078	14403124	(183892435)	+	(GT)n	Simple_repeat	1	47	(0)	2516884
633	27.4	4.5	1.2	chr3	14440070	14440239	(183855320)	C	MIRb	SINE/MIR	(1)	267	92	2516961
185	23.1	0.0	0.0	chr3	14505299	14505337	(183790222)	+	MIRc	SINE/MIR	40	78	(190)	2517077
13	5.2	0.0	0.0	chr3	14505633	14505652	(183789907)	+	(TCC)n	Simple_repeat	1	20	(0)	2517078
220	35.5	1.8	2.6	chr3	14847785	14847930	(183447629)	+	MIR3	SINE/MIR	14	157	(73)	2517712
1235	25.2	11.4	3.9	chr3	15148622	15149136	(183146423)	+	MLT1G3	LTR/ERVL-MaLR	3	561	(34)	2518280
29	16.4	1.6	1.6	chr3	15332284	15332346	(182963213)	+	(TCC)n	Simple_repeat	1	64	(0)	2518597
14	16.2	0.0	0.0	chr3	19947408	19947435	(178348124)	+	(CGC)n	Simple_repeat	1	28	(0)	2525351
20	9.7	0.0	2.8	chr3	31532887	31532922	(166762637)	+	(CCT)n	Simple_repeat	1	36	(0)	2542253
14	18.9	4.5	2.2	chr3	31533127	31533170	(166762389)	+	(GGC)n	Simple_repeat	1	46	(0)	2542254
244	19.2	18.9	0.0	chr3	37890412	37890510	(160405049)	+	HAL1	LINE/L1	2270	2391	(116)	2552223
15	8.0	3.7	0.0	chr3	37890838	37890864	(160404695)	+	(AGGA)n	Simple_repeat	1	28	(0)	2552224
242	26.5	6.0	1.7	chr3	38003345	38003478	(160292081)	C	MIR3	SINE/MIR	(129)	139	1	2552388
383	35.6	9.1	0.5	chr3	39127752	39127971	(159167588)	+	MIRb	SINE/MIR	27	267	(1)	2554013
16	22.9	0.0	7.6	chr3	39152889	39152954	(159142605)	+	(TCCC)n	Simple_repeat	1	66	(0)	2554042
246	31.1	4.3	6.9	chr3	39154505	39154649	(159140910)	+	L2c	LINE/L2	3025	3165	(222)	2554045
1136	30.9	3.3	3.0	chr3	39180055	39180693	(159114866)	C	L2a	LINE/L2	(139)	3287	2639	2554101
89	21.1	1.7	2.9	chr3	42659183	42659418	(155636141)	+	GA-rich	Low_complexity	1	240	(0)	2559447
181	30.2	3.6	0.0	chr3	42667873	42667925	(155627634)	C	L2b	LINE/L2	(50)	3325	3271	2559454
27	3.5	0.0	0.0	chr3	43773277	43773306	(154522253)	+	(AGACTCC)n	Simple_repeat	1	30	(0)	2561143
605	16.7	10.0	3.6	chr3	45996067	45996234	(152299325)	+	MER33	DNA/hAT-Charlie	34	213	(111)	2564747
249	36.4	3.5	4.1	chr3	46674915	46675083	(151620476)	C	MIRc	SINE/MIR	(52)	216	49	2565777
335	28.7	10.1	1.9	chr3	46895552	46895745	(151399814)	C	MIRc	SINE/MIR	(27)	241	31	2566082
11	27.4	2.0	2.0	chr3	48088856	48088905	(150206654)	+	(GGAGCCG)n	Simple_repeat	1	51	(0)	2568628
11	27.9	1.6	4.8	chr3	48446890	48446951	(149848608)	+	G-rich	Low_complexity	1	63	(0)	2569324
37	8.9	0.0	9.3	chr3	48504228	48504313	(149791246)	+	GA-rich	Low_complexity	1	86	(0)	2569464
214	26.4	4.2	9.0	chr3	49649713	49649812	(148645747)	+	L2b	LINE/L2	3255	3349	(26)	2571768
24	14.4	0.0	6.6	chr3	50236264	50236324	(148059235)	+	G-rich	Low_complexity	1	61	(0)	2572806
13	14.3	10.2	1.9	chr3	50236625	50236673	(148058886)	+	(CCCAGAC)n	Simple_repeat	1	54	(0)	2572807
12	16.9	0.0	0.0	chr3	50341022	50341048	(147954511)	+	(CCTT)n	Simple_repeat	1	27	(0)	2572929
36	4.9	0.0	0.0	chr3	51385311	51385352	(146910207)	+	(GGA)n	Simple_repeat	1	42	(0)	2574229
471	27.9	5.5	7.8	chr3	51961400	51961605	(146333954)	+	MIRb	SINE/MIR	19	219	(49)	2575224
15	21.0	7.2	2.7	chr3	52128284	52128352	(146167207)	+	(CAG)n	Simple_repeat	1	74	(0)	2575461
198	16.5	1.3	8.5	chr3	53805670	53806282	(144489277)	+	(TCC)n	Simple_repeat	1	621	(0)	2578098
498	31.9	9.2	2.6	chr3	58486720	58487583	(139807976)	C	L2b	LINE/L2	(11)	3364	2436	2586113
29	28.1	0.0	1.1	chr3	67654603	67654718	(130640841)	+	GA-rich	Low_complexity	1	114	(0)	2601160
12	19.6	0.0	0.0	chr3	67654708	67654736	(130640823)	+	(GGCCG)n	Simple_repeat	1	29	(0)	2601161
345	31.0	4.4	3.3	chr3	72039484	72039663	(126255896)	C	MER5A	DNA/hAT-Charlie	(6)	183	2	2608330
223	36.0	9.4	2.9	chr3	72039900	72040097	(126255462)	+	L2a	LINE/L2	2951	3165	(210)	2608331
807	25.8	0.0	1.0	chr3	72040098	72040289	(126255270)	C	MER91B	DNA/hAT-Tip100	(0)	190	1	2608332
34	17.1	0.0	0.0	chr3	107525317	107525378	(90770181)	+	GA-rich	Low_complexity	1	62	(0)	2651005
377	29.7	12.6	9.6	chr3	123780763	123781142	(74514417)	C	L2b	LINE/L2	(6)	3369	3002	2674287
19	22.6	0.0	0.0	chr3	125375030	125375070	(72920489)	+	(C)n	Simple_repeat	1	41	(0)	2676881
20	20.0	3.4	1.6	chr3	125375071	125375076	(72920483)	+	(CCGCCC)n	Simple_repeat	37	61	(0)	2676880
35	10.0	0.0	0.0	chr3	125375248	125375302	(72920257)	+	(CTC)n	Simple_repeat	1	55	(0)	2676882
289	30.6	13.1	0.0	chr3	126259757	126259942	(72035617)	C	MamRep137	DNA/TcMar-Tigger	(69)	441	228	2678310
240	26.3	3.9	3.3	chr3	126260035	126260987	(72034572)	+	(CCT)n	Simple_repeat	1	990	(0)	2678311
897	23.3	7.4	8.6	chr3	129440684	129441124	(68854435)	C	MER113	DNA/hAT-Charlie	(35)	486	52	2683754
282	29.6	3.3	5.5	chr3	129586392	129586559	(68709000)	C	L2c	LINE/L2	(221)	3166	3002	2684025
94	26.2	5.3	4.3	chr3	132722403	132722890	(65572669)	+	G-rich	Low_complexity	1	514	(0)	2688839
428	34.5	5.1	0.7	chr3	135670384	135670532	(62625027)	C	L2b	LINE/L2	(1)	3374	3219	2693173
37	32.1	1.3	1.9	chr3	139260608	139260764	(59034795)	+	GA-rich	Low_complexity	1	159	(0)	2699039
224	24.4	3.7	10.3	chr3	139329689	139329775	(58965784)	+	MIRc	SINE/MIR	149	229	(39)	2699156
233	30.6	12.1	3.6	chr3	141328809	141328974	(56966585)	+	L2c	LINE/L2	3021	3202	(185)	2702119
232	23.1	1.8	0.0	chr3	141329186	141329250	(56966309)	+	MIRb	SINE/MIR	200	261	(1)	2702120
15	16.6	0.0	0.0	chr3	143971976	143972002	(54323557)	+	(GC)n	Simple_repeat	1	27	(0)	2706424
75	8.3	0.0	0.0	chr3	150703722	150703823	(47591736)	+	(CTC)n	Simple_repeat	1	102	(0)	2715698
13	5.3	0.0	0.0	chr3	156826640	156826659	(41468900)	+	(CCT)n	Simple_repeat	1	20	(0)	2724616
34	27.5	1.6	2.4	chr3	158105768	158105890	(40189669)	+	(CCG)n	Simple_repeat	1	125	(0)	2726362
749	29.4	18.0	4.7	chr3	171158592	171159397	(27136162)	C	L2a	LINE/L2	(4)	3422	2451	2744111
31	0.0	0.0	0.0	chr3	183775956	183775984	(14519575)	+	(GGA)n	Simple_repeat	1	29	(0)	2763364
20	17.1	2.1	2.0	chr3	183775998	183776045	(14519514)	+	GA-rich	Low_complexity	1	49	(0)	2763365
39	23.6	4.3	4.7	chr3	184380205	184380295	(13915264)	+	(CGCC)n	Simple_repeat	4	99	(0)	2764502
13	16.8	0.0	0.0	chr3	184380348	184380374	(13915185)	+	(GCT)n	Simple_repeat	1	27	(0)	2764503
249	10.4	2.1	0.0	chr3	184544481	184544865	(13750694)	+	(CTC)n	Simple_repeat	1	393	(0)	2764871
34	12.5	1.3	5.1	chr3	184568932	184569008	(13726551)	+	(CCTC)n	Simple_repeat	1	78	(0)	2764920
12	14.9	6.0	5.7	chr3	184569120	184569169	(13726390)	+	G-rich	Low_complexity	1	53	(0)	2764921
20	21.6	0.0	3.5	chr3	184569184	184569240	(13726319)	+	(GGCG)n	Simple_repeat	1	57	(0)	2764922
275	20.3	5.9	0.0	chr3	184767681	184767744	(13527815)	C	LTR16	LTR/ERVL	(262)	176	109	2765282
18	16.7	7.9	5.2	chr3	185498746	185498834	(12796725)	+	(GATCCCG)n	Simple_repeat	1	96	(0)	2766483
561	25.8	7.5	1.9	chr3	193816658	193816819	(4478740)	C	MER5B	DNA/hAT-Charlie	(6)	172	1	2780052
479	30.6	3.6	6.6	chr3	193879618	193879873	(4415686)	C	L2b	LINE/L2	(503)	2916	2669	2780162
249	26.9	6.9	9.8	chr3	193879913	193880106	(4415453)	C	L2b	LINE/L2	(894)	2525	2338	2780162
2209	8.3	0.0	0.0	chr3	194002734	194003009	(4292550)	+	AluSx1	SINE/Alu	20	295	(17)	2780350
14	8.1	0.0	6.7	chr3	194003123	194003152	(4292407)	+	(CTC)n	Simple_repeat	1	30	(0)	2780351
115	10.8	0.6	1.1	chr3	195107499	195107677	(3187882)	+	(GGA)n	Simple_repeat	1	180	(0)	2782363
311	31.1	3.9	5.1	chr3	195714500	195714655	(2580904)	+	L2	LINE/L2	2831	2984	(435)	2783530
2213	12.0	0.0	0.7	chr3	195720474	195720773	(2574786)	+	AluSx	SINE/Alu	1	298	(14)	2783544
219	31.7	7.3	2.9	chr3	195839471	195839574	(2455985)	C	L2c	LINE/L2	(224)	3163	3055	2783717
308	32.9	3.5	0.7	chr3	196144476	196144613	(2150946)	+	L2c	LINE/L2	3049	3190	(197)	2784334
826	31.3	12.2	5.6	chr3	197526012	197526990	(768569)	C	LTR78	LTR/ERV1	(43)	1261	210	2787065
607	18.7	1.5	1.1	chr4	924597	924732	(189289823)	+	MSTA	LTR/ERVL-MaLR	3	141	(234)	2789678
243	21.1	0.0	5.3	chr4	924806	924880	(189289675)	+	MSTA	LTR/ERVL-MaLR	92	162	(219)	2789678
288	25.6	7.9	8.5	chr4	1130404	1130544	(189084011)	+	L2a	LINE/L2	3286	3425	(1)	2789907
204	15.8	2.6	0.0	chr4	1130555	1130592	(189083963)	+	L2b	LINE/L2	3337	3375	(0)	2789908
180	22.9	12.7	0.0	chr4	1130610	1130657	(189083898)	+	MamTip2	DNA/hAT-Tip100	179	233	(72)	2789909
419	33.1	6.0	0.0	chr4	1130930	1131086	(189083469)	+	MIR	SINE/MIR	73	239	(23)	2789910
39	0.0	0.0	0.0	chr4	1401315	1401350	(188813205)	+	(GGAGGGA)n	Simple_repeat	1	36	(0)	2790175
255	19.6	0.0	5.1	chr4	1583380	1583438	(188631117)	C	LTR16B2	LTR/ERVL	(239)	223	168	2790320
188	21.1	5.5	0.0	chr4	1583496	1583547	(188631008)	C	MIR	SINE/MIR	(32)	230	176	2790321
12	25.6	2.1	2.0	chr4	1583647	1583694	(188630861)	+	(TGCTCC)n	Simple_repeat	1	49	(0)	2790322
752	30.7	3.9	2.3	chr4	1583826	1584421	(188630134)	C	L1M5	LINE/L1	(680)	5514	4911	2790323
13	0.0	6.9	6.5	chr4	1764870	1764898	(188449657)	+	(TCC)n	Simple_repeat	1	31	(0)	2790578
285	30.2	6.1	0.0	chr4	1792841	1792979	(188421576)	+	L2c	LINE/L2	3058	3205	(182)	2790606
180	3.7	0.0	0.0	chr4	1809460	1809486	(188405069)	C	L2c	LINE/L2	(227)	3160	3134	2790623
655	13.0	10.8	0.0	chr4	1852763	1852870	(188361685)	+	AluJb	SINE/Alu	186	306	(6)	2790690
229	21.4	2.8	7.9	chr4	1852871	1852946	(188361609)	C	MER21C	LTR/ERVL	(743)	195	124	2790689
234	32.0	4.5	3.8	chr4	1853059	1853191	(188361364)	+	L2	LINE/L2	2423	2556	(863)	2790691
1382	23.0	4.0	1.9	chr4	1853286	1853781	(188360774)	+	L1MC3	LINE/L1	7154	7688	(97)	2790692
384	27.3	1.6	0.8	chr4	3664456	3664577	(186549978)	+	MER45A	DNA/hAT-Tip100	37	159	(19)	2793445
13	23.9	0.0	2.4	chr4	4859480	4859520	(185355035)	+	(CCCCT)n	Simple_repeat	1	41	(0)	2795608
14	35.9	0.0	0.0	chr4	4859983	4860049	(185354506)	+	(CGCGGC)n	Simple_repeat	1	67	(0)	2795609
218	25.2	16.6	0.9	chr4	5710919	5711031	(184503524)	+	MIRb	SINE/MIR	119	248	(14)	2797035
214	38.6	9.2	4.2	chr4	6647096	6647527	(183567028)	C	L2	LINE/L2	(2493)	926	471	2798803
535	28.5	2.8	1.7	chr4	6660242	6660416	(183554139)	C	MER67A	LTR/ERV1	(306)	405	229	2798829
235	15.4	0.0	1.2	chr4	6660429	6660840	(183553715)	+	GA-rich	Low_complexity	1	412	(0)	2798830
2151	10.6	0.0	0.0	chr4	6660847	6661139	(183553416)	C	AluSc	SINE/Alu	(16)	293	1	2798831
400	22.4	0.0	3.0	chr4	6677207	6677307	(183537248)	C	MER94	DNA/hAT-Blackjack	(15)	119	22	2798856
230	32.5	4.6	0.0	chr4	6689422	6689504	(183525051)	+	MIR3	SINE/MIR	92	178	(30)	2798885
412	25.2	4.5	0.9	chr4	6733012	6733119	(183481436)	C	MIR3	SINE/MIR	(14)	194	83	2798965
850	28.5	7.4	5.8	chr4	6733681	6734160	(183480395)	C	L2a	LINE/L2	(0)	3426	2939	2798967
241	19.4	24.7	0.0	chr4	6734775	6734841	(183479714)	+	MIR3	SINE/MIR	38	126	(82)	2798968
18	18.6	0.0	0.0	chr4	7042780	7042816	(183171739)	+	(CTC)n	Simple_repeat	1	37	(0)	2799508
194	19.3	4.2	4.2	chr4	7294644	7295236	(182919319)	+	(CCTCTC)n	Simple_repeat	1	618	(0)	2799940
279	31.9	8.7	0.0	chr4	8271264	8271420	(181943135)	C	MER103C	DNA/hAT-Charlie	(63)	234	63	2801514
13	16.6	7.3	0.0	chr4	8771764	8771804	(181442751)	+	(TGTCTG)n	Simple_repeat	1	44	(0)	2802282
22	19.5	0.0	0.0	chr4	15003113	15003159	(175211396)	+	(CCT)n	Simple_repeat	1	47	(0)	2811955
14	8.1	3.9	0.0	chr4	15003176	15003201	(175211354)	+	(AGC)n	Simple_repeat	1	27	(0)	2811956
14	15.9	0.0	0.0	chr4	25234217	25234244	(164980311)	+	GA-rich	Low_complexity	1	28	(0)	2828551
29	6.0	1.7	6.6	chr4	40265645	40265704	(149948851)	+	(GGGAGA)n	Simple_repeat	1	61	(0)	2851621
409	30.1	7.4	0.6	chr4	40265840	40266016	(149948539)	C	MER91A	DNA/hAT-Tip100	(6)	190	1	2851622
14	13.4	2.1	8.2	chr4	40857167	40857214	(149357341)	+	(CGCC)n	Simple_repeat	1	49	(0)	2852979
15	22.3	0.0	6.8	chr4	51844404	51844462	(138370093)	+	(GCGCGG)n	Simple_repeat	1	59	(0)	2865386
12	27.7	0.0	0.0	chr4	54064238	54064276	(136150279)	+	(CTC)n	Simple_repeat	1	39	(0)	2868660
14	9.6	0.0	0.0	chr4	54064473	54064495	(136150060)	+	(CCG)n	Simple_repeat	1	23	(0)	2868661
15	4.3	4.2	0.0	chr4	67719946	67719969	(122494586)	+	(TAA)n	Simple_repeat	1	25	(0)	2887370
33	23.1	1.9	3.6	chr4	70688885	70688992	(119525563)	+	GA-rich	Low_complexity	1	110	(0)	2890981
21	8.6	2.6	2.5	chr4	70689132	70689170	(119525385)	+	(AGG)n	Simple_repeat	1	40	(0)	2890982
17	11.6	0.0	0.0	chr4	70705259	70705287	(119509268)	+	(GCG)n	Simple_repeat	1	29	(0)	2891024
14	23.2	3.9	1.9	chr4	72569185	72569236	(117645319)	+	(AGCG)n	Simple_repeat	1	54	(0)	2893668
22	17.0	0.0	6.6	chr4	72569253	72569313	(117645242)	+	GA-rich	Low_complexity	1	61	(0)	2893669
13	19.2	6.1	1.9	chr4	72569320	72569368	(117645187)	+	(GCTGCTG)n	Simple_repeat	1	52	(0)	2893670
14	14.2	4.9	2.3	chr4	74365267	74365307	(115849248)	+	(CAGCGCC)n	Simple_repeat	1	43	(0)	2896073
45	13.3	0.0	0.0	chr4	88697280	88697353	(101517202)	+	(CCT)n	Simple_repeat	1	74	(0)	2917574
17	20.6	0.0	0.0	chr4	88823320	88823358	(101391197)	+	(CTC)n	Simple_repeat	1	39	(0)	2917721
32	8.3	2.0	0.0	chr4	88823366	88823416	(101391139)	+	(CCT)n	Simple_repeat	1	52	(0)	2917722
24	19.2	0.0	1.8	chr4	89837163	89837217	(100377338)	+	(TCC)n	Simple_repeat	1	55	(0)	2919194
1637	26.4	6.8	2.4	chr4	109213308	109213773	(81000782)	+	MLT1G1	LTR/ERVL-MaLR	78	565	(14)	2944617
14	13.9	3.1	0.0	chr4	112514924	112514955	(77699600)	+	(CGCCCC)n	Simple_repeat	1	33	(0)	2949283
2596	17.2	1.3	1.3	chr4	122700198	122700669	(67513886)	+	MER70A	LTR/ERVL	1	472	(0)	2962867
18	9.6	0.0	5.4	chr4	128812298	128812334	(61402221)	+	GA-rich	Low_complexity	1	37	(0)	2971409
13	18.8	0.0	8.0	chr4	128812373	128812422	(61402133)	+	(CGGCGCG)n	Simple_repeat	1	50	(0)	2971410
18	7.5	0.0	0.0	chr4	139556235	139556262	(50658293)	+	(GGA)n	Simple_repeat	1	28	(0)	2984844
32	19.4	2.5	1.2	chr4	140151163	140151241	(50063314)	+	GA-rich	Low_complexity	1	81	(0)	2985797
12	7.9	7.4	0.0	chr4	140151677	140151703	(50062852)	+	G-rich	Low_complexity	1	29	(0)	2985798
12	13.7	6.2	0.0	chr4	140154048	140154079	(50060476)	+	(CGCTGC)n	Simple_repeat	1	34	(0)	2985803
16	0.0	0.0	0.0	chr4	140154108	140154127	(50060428)	+	(CGC)n	Simple_repeat	1	20	(0)	2985804
34	2.4	2.3	2.2	chr4	140154128	140154171	(50060384)	+	(CCT)n	Simple_repeat	1	45	(0)	2985805
18	15.0	2.1	4.1	chr4	140154307	140154354	(50060201)	+	(CGCCCGG)n	Simple_repeat	1	49	(0)	2985806
21	16.2	2.0	2.0	chr4	143336127	143336176	(46878379)	+	(CTCC)n	Simple_repeat	1	51	(0)	2990175
12	32.3	0.0	1.8	chr4	143336252	143336307	(46878248)	+	G-rich	Low_complexity	1	56	(0)	2990176
12	13.5	2.8	5.4	chr4	143336362	143336397	(46878158)	+	G-rich	Low_complexity	1	37	(0)	2990176
26	22.4	1.3	2.6	chr4	154491788	154491863	(35722692)	+	G-rich	Low_complexity	1	77	(0)	3006119
13	25.2	0.0	2.3	chr4	154491937	154491980	(35722575)	+	(CGCCTC)n	Simple_repeat	1	44	(0)	3006120
15	13.3	7.3	0.0	chr4	183504266	183504306	(6710249)	+	(CGCACGC)n	Simple_repeat	1	44	(0)	3045071
26	15.6	0.0	0.0	chr4	184473891	184473934	(5740621)	+	(CA)n	Simple_repeat	1	44	(0)	3046624
35	0.0	0.0	6.5	chr4	184474081	184474126	(5740429)	+	(CCT)n	Simple_repeat	1	46	(0)	3046625
31	17.6	2.5	2.4	chr4	184474579	184474658	(5739897)	+	(CCCTCCG)n	Simple_repeat	1	82	(0)	3046627
242	33.5	16.9	1.6	chr4	185036666	185037050	(5177505)	+	L2a	LINE/L2	2567	3022	(397)	3047575
1151	10.1	1.3	0.0	chr4	186888903	186889051	(3325504)	+	AluYc	SINE/Alu	139	289	(10)	3050282
12	29.0	6.5	2.0	chr5	145734	145825	(181392434)	+	G-rich	Low_complexity	1	98	(0)	3055095
22	15.1	2.3	0.0	chr5	891673	891716	(180646543)	+	(CTT)n	Simple_repeat	1	45	(0)	3055777
13	33.0	0.0	0.0	chr5	944681	944733	(180593526)	+	(CTCCTA)n	Simple_repeat	1	53	(0)	3055817
556	27.1	3.7	0.0	chr5	945214	945368	(180592891)	C	Arthur1B	DNA/hAT-Tip100	(993)	232	72	3055818
233	29.0	0.0	3.9	chr5	1224989	1225092	(180313167)	+	L1MD1	LINE/L1	6141	6240	(2)	3056060
771	26.6	3.5	11.9	chr5	1241503	1241847	(180296412)	C	Tigger17c	DNA/TcMar-Tigger	(835)	353	39	3056072
19	6.0	5.7	0.0	chr5	1473036	1473070	(180065189)	+	(CTCCTCT)n	Simple_repeat	1	37	(0)	3056279
275	16.1	5.0	4.1	chr5	3584457	3585215	(177953044)	+	GA-rich	Low_complexity	1	797	(0)	3058488
275	26.0	3.9	9.6	chr5	3585383	3585522	(177952737)	+	MIRb	SINE/MIR	33	173	(57)	3058489
2194	9.3	0.0	0.4	chr5	5308688	5308967	(176229292)	+	AluSx	SINE/Alu	22	300	(12)	3060405
60	15.6	0.0	1.8	chr5	5416924	5417036	(176121223)	+	GA-rich	Low_complexity	1	113	(0)	3060543
31	14.0	0.0	0.0	chr5	5422615	5422669	(176115590)	+	(GGGGC)n	Simple_repeat	1	55	(0)	3060547
416	23.2	2.0	2.0	chr5	10318368	10318468	(171219791)	+	MLT1H2	LTR/ERVL-MaLR	86	186	(303)	3066687
311	26.9	4.4	1.8	chr5	10318551	10318660	(171219599)	+	MLT1H2	LTR/ERVL-MaLR	421	533	(16)	3066687
358	32.8	0.8	1.5	chr5	10318693	10318828	(171219431)	+	MLT1O	LTR/ERVL-MaLR	29	163	(379)	3066688
194	31.5	1.8	0.0	chr5	10457557	10457610	(171080649)	C	MIRb	SINE/MIR	(81)	187	133	3066919
337	27.1	10.0	4.6	chr5	10457999	10458149	(171080110)	C	MER63A	DNA/hAT-Blackjack	(50)	160	1	3066920
318	30.3	15.7	3.9	chr5	10601354	10601665	(170936594)	+	L2c	LINE/L2	3032	3387	(0)	3067213
2337	8.7	0.0	0.0	chr5	32260952	32261239	(149277020)	+	AluSx1	SINE/Alu	2	289	(23)	3096505
969	26.4	8.9	3.5	chr5	32261284	32261762	(149276497)	+	L2a	LINE/L2	2919	3425	(1)	3096506
15	22.6	4.8	0.0	chr5	38556751	38556792	(142981467)	+	(CG)n	Simple_repeat	1	44	(0)	3106292
14	19.9	4.2	2.0	chr5	39074435	39074482	(142463777)	+	(CCCCG)n	Simple_repeat	1	50	(0)	3107042
13	20.5	5.8	1.8	chr5	40797717	40797768	(140740491)	+	(CGCCCGC)n	Simple_repeat	1	55	(0)	3109433
1387	24.3	6.2	7.1	chr5	54862120	54862734	(126675525)	+	L2a	LINE/L2	2825	3425	(1)	3122373
184	20.9	2.3	0.0	chr5	65101073	65101115	(116437144)	+	L2b	LINE/L2	3331	3374	(1)	3137370
20	20.9	5.3	2.5	chr5	65925814	65925888	(115612371)	+	(CCCT)n	Simple_repeat	1	79	(0)	3138688
13	15.4	5.6	0.0	chr5	68215681	68215716	(113322543)	+	G-rich	Low_complexity	1	38	(0)	3141939
12	4.1	3.5	6.7	chr5	69167324	69167352	(112370907)	+	(CTGC)n	Simple_repeat	1	30	(0)	3143407
17	4.3	0.0	0.0	chr5	72107258	72107281	(109430978)	+	(TCC)n	Simple_repeat	1	24	(0)	3148506
16	21.0	4.1	5.3	chr5	72107366	72107438	(109430821)	+	(CGCGGAG)n	Simple_repeat	1	76	(0)	3148507
21	21.1	0.0	0.0	chr5	73448242	73448300	(108089959)	+	(CGTCCT)n	Simple_repeat	1	59	(0)	3150486
15	19.9	5.4	3.4	chr5	78648612	78648667	(102889592)	+	GA-rich	Low_complexity	1	59	(0)	3158377
13	10.0	0.0	0.0	chr5	78985153	78985174	(102553085)	+	(CAG)n	Simple_repeat	1	22	(0)	3158885
20	15.9	5.1	6.0	chr5	79514225	79514303	(102023956)	+	(GCCGCGG)n	Simple_repeat	1	83	(0)	3159873
12	22.1	4.8	0.0	chr5	83471372	83471413	(98066846)	+	G-rich	Low_complexity	1	44	(0)	3166012
16	22.3	0.0	2.3	chr5	83471655	83471698	(98066561)	+	(CCT)n	Simple_repeat	1	44	(0)	3166013
22	8.1	0.0	6.7	chr5	88141323	88141367	(93396892)	+	(GGA)n	Simple_repeat	1	45	(0)	3171928
15	24.4	2.9	4.3	chr5	88883183	88883250	(92655009)	+	(GCGA)n	Simple_repeat	1	70	(0)	3172895
22	29.9	1.4	0.0	chr5	88883219	88883287	(92654972)	+	(GC)n	Simple_repeat	1	70	(0)	3172896
42	7.2	0.0	1.6	chr5	88883299	88883360	(92654899)	+	(GGA)n	Simple_repeat	1	62	(0)	3172897
17	21.0	0.0	5.5	chr5	95284055	95284109	(86254150)	+	GA-rich	Low_complexity	1	55	(0)	3180923
15	19.4	0.0	4.4	chr5	112707984	112708028	(68830231)	+	(CTCTCCC)n	Simple_repeat	1	45	(0)	3203153
24	8.6	0.0	2.5	chr5	132776152	132776191	(48762068)	+	(CCT)n	Simple_repeat	1	40	(0)	3229897
2602	19.6	4.6	0.0	chr5	133932730	133933224	(47605035)	+	LTR53	LTR/ERVL	1	519	(0)	3231602
453	27.6	0.0	2.9	chr5	133933392	133933529	(47604730)	+	MamRep4096	DNA/hAT-Tip100	22	155	(271)	3231603
452	26.4	1.6	0.0	chr5	135457360	135457490	(46080769)	C	MIRb	SINE/MIR	(115)	153	8	3234315
15	15.9	2.1	6.1	chr5	135457842	135457889	(46080370)	+	(GAGCAG)n	Simple_repeat	1	49	(0)	3234316
15	4.1	4.0	0.0	chr5	138465013	138465037	(43073222)	+	(AGGG)n	Simple_repeat	1	26	(0)	3238915
248	27.0	7.4	4.8	chr5	140349355	140349459	(41188800)	C	MIR3	SINE/MIR	(75)	133	26	3242430
487	30.0	11.4	2.6	chr5	140349608	140349808	(41188451)	C	MIRb	SINE/MIR	(45)	223	7	3242431
247	17.4	6.8	4.2	chr5	141968852	141968923	(39569336)	+	MER5A	DNA/hAT-Charlie	27	100	(89)	3244973
22	20.1	4.2	2.7	chr5	149730222	149730293	(31807966)	+	(CCTC)n	Simple_repeat	1	75	(0)	3258410
42	0.0	0.0	2.3	chr5	150245339	150245381	(31292878)	+	(CCT)n	Simple_repeat	1	43	(0)	3259528
16	18.4	7.4	4.6	chr5	150357906	150357986	(31180273)	+	(GCGGCCC)n	Simple_repeat	1	87	(0)	3259764
192	20.8	7.0	1.9	chr5	150358028	150358081	(31180178)	+	MIR3	SINE/MIR	103	159	(49)	3259765
1139	30.6	10.5	3.2	chr5	150459494	150460012	(31078247)	C	L2a	LINE/L2	(1)	3425	2877	3259994
1829	10.4	11.0	0.7	chr5	150460013	150460039	(31078220)	C	AluSz	SINE/Alu	(2)	310	285	3259995
42	0.0	0.0	0.0	chr5	150460040	150460077	(31078182)	+	(TTA)n	Simple_repeat	1	38	(0)	3259996
1829	10.4	11.0	0.7	chr5	150460078	150460327	(31077932)	C	AluSz	SINE/Alu	(28)	284	1	3259995
190	25.9	9.6	2.3	chr5	150539445	150539531	(30998728)	+	MIR3	SINE/MIR	6	99	(109)	3260198
418	27.0	12.2	0.4	chr5	150614891	150615093	(30923166)	+	MIR	SINE/MIR	13	268	(0)	3260363
267	33.1	3.1	2.5	chr5	150778484	150778644	(30759615)	C	MIR3	SINE/MIR	(25)	183	22	3260679
12	11.1	3.2	3.1	chr5	150778679	150778709	(30759550)	+	(GGAGCT)n	Simple_repeat	1	32	(0)	3260680
294	31.2	12.5	0.7	chr5	151157894	151158048	(30380211)	C	MIR3	SINE/MIR	(3)	205	30	3261276
726	23.6	11.5	0.0	chr5	160370042	160370249	(21168010)	+	MIRb	SINE/MIR	29	263	(5)	3278044
297	21.0	0.0	1.6	chr5	160370271	160370333	(21167926)	+	MIRb	SINE/MIR	206	267	(1)	3278045
14	0.0	0.0	0.0	chr5	160370447	160370464	(21167795)	+	(TCC)n	Simple_repeat	1	18	(0)	3278046
15	12.9	4.2	6.0	chr5	169637178	169637225	(11901034)	+	G-rich	Low_complexity	1	50	(0)	3292109
466	20.9	7.9	0.0	chr5	170633377	170633505	(10904754)	C	L2a	LINE/L2	(258)	3168	3029	3294003
13	23.8	1.5	7.2	chr5	172770604	172770671	(8767588)	+	(GCGCGCC)n	Simple_repeat	1	69	(0)	3298155
477	28.4	9.3	0.9	chr5	172881661	172881863	(8656396)	+	MIRb	SINE/MIR	20	241	(27)	3298423
301	37.2	6.6	0.4	chr5	172881894	172882136	(8656123)	C	Plat_L3	LINE/CR1	(441)	3145	2887	3298424
180	29.4	15.0	0.0	chr5	172926867	172926934	(8611325)	C	MIRc	SINE/MIR	(156)	112	33	3298531
31	20.4	3.4	2.2	chr5	173328239	173328327	(8209932)	+	(CTC)n	Simple_repeat	1	92	(0)	3299412
13	29.6	1.8	1.8	chr5	173328637	173328695	(8209564)	+	(TGCG)n	Simple_repeat	1	59	(0)	3299413
180	36.4	5.0	5.0	chr5	174532514	174532652	(7005607)	C	MIR	SINE/MIR	(101)	161	23	3301677
589	23.9	10.6	0.0	chr5	174532863	174533016	(7005243)	+	MER45A	DNA/hAT-Tip100	4	178	(0)	3301678
205	30.6	10.4	1.6	chr5	176661333	176661455	(4876804)	C	L2b	LINE/L2	(0)	3375	3241	3305753
270	8.2	7.5	2.0	chr5	176661470	176661519	(4876740)	C	MADE1	DNA/TcMar-Mariner	(1233)	54	2	3305754
209	32.3	2.9	8.2	chr5	176741840	176742021	(4796238)	+	MER5A	DNA/hAT-Charlie	17	188	(1)	3305904
480	21.4	7.9	0.0	chr5	176742085	176742201	(4796058)	+	MIR	SINE/MIR	39	165	(97)	3305905
36	1.5	8.2	3.8	chr5	176850920	176850992	(4687267)	+	(TCCCAGGACT)n	Simple_repeat	1	79	(0)	3306110
405	20.3	19.2	2.0	chr5	176851104	176851249	(4687010)	+	MIR	SINE/MIR	15	191	(71)	3306111
14	25.5	3.9	4.9	chr5	177363270	177363347	(4174912)	+	G-rich	Low_complexity	1	81	(0)	3307264
328	30.4	8.8	7.4	chr5	177363400	177363534	(4174725)	C	MIRb	SINE/MIR	(109)	159	23	3307265
12	19.1	2.6	2.6	chr5	177366812	177366849	(4171410)	+	G-rich	Low_complexity	1	39	(0)	3307273
307	30.2	3.0	1.0	chr5	177451247	177451343	(4086916)	+	MIRb	SINE/MIR	88	186	(82)	3307445
41	15.8	10.8	0.0	chr5	180611514	180611642	(926617)	+	(CCCCCAG)n	Simple_repeat	1	143	(0)	3312982
71	12.8	0.0	0.0	chr5	181043184	181043311	(494948)	+	(GT)n	Simple_repeat	1	128	(0)	3313559
1418	17.3	2.6	1.3	chr5	181052210	181052508	(485751)	+	L1MB3	LINE/L1	5881	6183	(0)	3313565
14	15.7	0.0	5.1	chr5	181052900	181052938	(485321)	+	G-rich	Low_complexity	1	39	(0)	3313573
246	31.3	14.1	2.5	chr6	300311	300510	(170505469)	C	L2b	LINE/L2	(491)	2928	2702	3314661
244	24.8	19.9	0.8	chr6	300785	300902	(170505077)	C	MLT1N2	LTR/ERVL-MaLR	(8)	554	409	3314662
26	21.1	4.7	4.5	chr6	2766093	2766199	(168039780)	+	(GGACGA)n	Simple_repeat	1	112	(0)	3317890
84	4.9	1.9	0.9	chr6	2797848	2797955	(168008024)	+	(CTC)n	Simple_repeat	1	110	(0)	3317932
190	19.4	7.7	11.1	chr6	2952809	2952889	(167853090)	C	MamRTE1	LINE/RTE-BovB	(1252)	2560	2483	3318154
15	27.1	4.5	0.0	chr6	3068925	3068990	(167736989)	+	G-rich	Low_complexity	1	69	(0)	3318348
510	31.0	11.1	4.3	chr6	3328468	3328817	(167477162)	+	MLT2C1	LTR/ERVL	13	389	(8)	3318739
32	3.0	0.0	0.0	chr6	3457092	3457125	(167348854)	+	(CTC)n	Simple_repeat	1	34	(0)	3318917
61	29.6	3.0	5.6	chr6	4135582	4135982	(166669997)	+	G-rich	Low_complexity	1	413	(0)	3320017
935	14.7	12.4	1.6	chr6	5031459	5031652	(165774327)	+	MER20	DNA/hAT-Charlie	2	219	(0)	3321391
26	0.0	3.0	2.9	chr6	7108317	7108349	(163697630)	+	(TCC)n	Simple_repeat	1	34	(0)	3324625
285	37.9	0.7	6.7	chr6	11918683	11918846	(158887133)	C	MamSINE1	SINE/tRNA-RTE	(65)	225	72	3331905
195	27.2	22.7	6.8	chr6	11921329	11921474	(158884505)	+	MIR3	SINE/MIR	33	208	(0)	3331910
14	18.3	0.0	7.8	chr6	12013008	12013058	(158792921)	+	(GGTCG)n	Simple_repeat	1	51	(0)	3332078
14	18.5	7.0	0.0	chr6	12013074	12013116	(158792863)	+	GA-rich	Low_complexity	1	46	(0)	3332079
12	8.9	4.2	0.0	chr6	12013137	12013160	(158792819)	+	(CCT)n	Simple_repeat	1	25	(0)	3332080
17	13.4	0.0	2.9	chr6	13924389	13924423	(156881556)	+	GA-rich	Low_complexity	1	35	(0)	3335168
18	19.2	2.0	2.0	chr6	13924572	13924620	(156881359)	+	(GGT)n	Simple_repeat	1	50	(0)	3335169
18	0.0	0.0	0.0	chr6	14271387	14271406	(156534573)	+	(T)n	Simple_repeat	1	20	(0)	3335728
430	35.2	14.2	3.6	chr6	14271414	14271877	(156534102)	+	MamRTE1	LINE/RTE-BovB	2155	2693	(1119)	3335729
695	16.2	0.0	0.0	chr6	15036545	15036655	(155769324)	+	AluSg7	SINE/Alu	189	299	(10)	3337063
16	16.8	0.0	0.0	chr6	15036661	15036688	(155769291)	+	(T)n	Simple_repeat	1	28	(0)	3337064
19	21.4	6.9	1.3	chr6	15248822	15248893	(155557086)	+	(GGC)n	Simple_repeat	1	77	(0)	3337662
13	24.6	2.3	0.0	chr6	15400871	15400913	(155405066)	+	(CCTC)n	Simple_repeat	1	44	(0)	3337905
13	8.1	3.6	3.5	chr6	16761363	16761390	(154044589)	+	(TGC)n	Simple_repeat	1	29	(0)	3340016
39	1.8	5.0	3.2	chr6	16761485	16761544	(154044435)	+	(CTC)n	Simple_repeat	1	63	(0)	3340017
26	17.1	3.4	0.0	chr6	16761548	16761606	(154044373)	+	(CGCT)n	Simple_repeat	1	61	(0)	3340018
2272	12.3	0.0	0.3	chr6	18043493	18043801	(152762178)	C	AluSx1	SINE/Alu	(3)	309	2	3342315
29	8.3	1.9	1.9	chr6	18263848	18263900	(152542079)	+	(TCC)n	Simple_repeat	1	54	(0)	3342727
18	28.7	1.1	5.3	chr6	18264204	18264298	(152541681)	+	(CGCC)n	Simple_repeat	1	90	(0)	3342728
978	8.8	13.8	0.0	chr6	26341510	26341646	(144464333)	C	AluSg	SINE/Alu	(150)	160	2	3355062
239	23.8	3.4	6.7	chr6	26342201	26342290	(144463689)	C	MIRc	SINE/MIR	(17)	251	165	3355063
22	6.3	0.0	2.9	chr6	26383859	26383893	(144422086)	+	(CCT)n	Simple_repeat	1	35	(0)	3355154
1263	27.3	7.0	2.1	chr6	27149079	27149497	(143656482)	C	LTR16A	LTR/ERVL	(10)	441	1	3356370
556	23.8	7.4	1.0	chr6	27252055	27252249	(143553730)	+	MIRb	SINE/MIR	26	243	(25)	3356581
551	0.0	0.0	21.3	chr6	27631421	27631514	(143174465)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	3357259
11	30.8	2.4	4.7	chr6	31395861	31395943	(139410036)	+	GA-rich	Low_complexity	1	85	(0)	3363270
14	28.6	2.8	2.7	chr6	31664207	31664277	(139141702)	+	(CTTCTG)n	Simple_repeat	1	73	(0)	3363689
14	19.8	2.3	2.3	chr6	31795863	31795905	(139010074)	+	(CGCAGGA)n	Simple_repeat	1	44	(0)	3363903
183	21.1	2.6	0.0	chr6	31796137	31796174	(139009805)	+	MIR3	SINE/MIR	109	147	(61)	3363904
2228	11.0	0.7	1.9	chr6	31796179	31796291	(139009688)	+	AluSx	SINE/Alu	1	113	(199)	3363905
2003	7.2	0.4	0.0	chr6	31796292	31796541	(139009438)	+	AluSg7	SINE/Alu	16	266	(43)	3363906
19	8.9	3.5	8.5	chr6	31902313	31902418	(138903561)	+	(CGCCCG)n	Simple_repeat	1	100	(0)	3364127
43	28.5	3.1	3.5	chr6	31979149	31979341	(138826638)	+	GA-rich	Low_complexity	1	199	(0)	3364272
14	17.5	0.0	9.3	chr6	32109351	32109404	(138696575)	+	GA-rich	Low_complexity	1	54	(0)	3364396
182	27.3	0.0	0.0	chr6	32218153	32218196	(138587783)	+	MIR1_Amn	SINE/MIR	44	87	(143)	3364569
16	23.5	0.0	0.0	chr6	32970868	32970899	(137835080)	+	G-rich	Low_complexity	1	32	(0)	3365687
351	25.0	7.9	6.7	chr6	33013820	33013969	(137792010)	C	L1MEh	LINE/L1	(1828)	407	256	3365756
13	21.3	1.9	5.5	chr6	33277535	33277588	(137528391)	+	(CCCTGC)n	Simple_repeat	1	55	(0)	3366124
83	18.2	2.5	5.6	chr6	33420013	33420256	(137385723)	+	(CCT)n	Simple_repeat	1	250	(0)	3366422
20	19.0	3.6	1.7	chr6	33454843	33454898	(137351081)	+	(TGT)n	Simple_repeat	1	58	(0)	3366470
32	7.2	0.0	0.0	chr6	33882635	33882678	(136923301)	+	(GTTTA)n	Simple_repeat	1	44	(0)	3367271
2250	8.9	0.0	0.0	chr6	33882679	33882960	(136923019)	C	AluSx	SINE/Alu	(30)	282	1	3367272
188	37.6	7.6	0.0	chr6	34057372	34057456	(136748523)	+	L3	LINE/CR1	3955	4046	(53)	3367554
602	27.7	7.8	0.5	chr6	34200362	34200564	(136605415)	C	L2b	LINE/L2	(202)	3173	2955	3367834
765	23.9	15.3	0.8	chr6	34200706	34200950	(136605029)	C	MLT1J	LTR/ERVL-MaLR	(159)	353	67	3367839
300	33.3	6.7	0.6	chr6	34200996	34201090	(136604889)	C	L2b	LINE/L2	(528)	2891	2790	3367834
289	31.2	14.8	0.6	chr6	34277343	34277516	(136528463)	C	MIRb	SINE/MIR	(59)	209	7	3368023
17	16.8	2.5	0.0	chr6	34462555	34462594	(136343385)	+	(TCTCCCC)n	Simple_repeat	1	41	(0)	3368458
1993	15.3	0.6	1.3	chr6	35487574	35487750	(135318229)	+	AluSz	SINE/Alu	134	311	(1)	3370477
275	34.3	2.9	9.6	chr6	35487751	35487857	(135318122)	C	MIRc	SINE/MIR	(77)	191	93	3370476
328	30.6	9.5	4.2	chr6	36117347	36117585	(134688394)	+	L2b	LINE/L2	3020	3272	(115)	3371822
234	27.4	9.5	0.0	chr6	36810676	36810770	(133995209)	C	MIR3	SINE/MIR	(19)	189	85	3373339
17	27.3	1.6	1.6	chr6	36986054	36986116	(133819863)	+	(AGCTCC)n	Simple_repeat	1	64	(0)	3373669
14	29.1	2.5	3.7	chr6	36986351	36986430	(133819549)	+	G-rich	Low_complexity	1	82	(0)	3373670
19	31.8	3.8	1.8	chr6	37029270	37029375	(133776604)	+	GA-rich	Low_complexity	1	110	(0)	3373762
32	0.0	0.0	0.0	chr6	37170248	37170277	(133635702)	+	(GCA)n	Simple_repeat	1	30	(0)	3374137
35	20.9	0.0	0.0	chr6	37170434	37170510	(133635469)	+	(CAGCCA)n	Simple_repeat	1	77	(0)	3374138
17	21.1	0.0	7.8	chr6	37697623	37697686	(133108293)	+	(CGC)n	Simple_repeat	1	64	(0)	3375149
16	21.4	1.9	3.7	chr6	37697791	37697843	(133108136)	+	G-rich	Low_complexity	1	54	(0)	3375150
18	15.0	0.0	7.7	chr6	37697920	37697971	(133108008)	+	(CTC)n	Simple_repeat	1	52	(0)	3375151
20	22.2	7.6	2.0	chr6	37697972	37698009	(133107970)	+	(CGCT)n	Simple_repeat	3	99	(0)	3375152
35	32.1	0.0	3.2	chr6	37819784	37819806	(132986173)	+	(CCCGCC)n	Simple_repeat	1	35	(115)	3375438
19	11.5	8.1	4.5	chr6	37819807	37819868	(132986111)	+	(CGCC)n	Simple_repeat	1	67	(0)	3375439
442	31.4	5.3	7.4	chr6	40622871	40623100	(130182879)	+	MIRb	SINE/MIR	27	251	(17)	3379797
15	17.0	5.0	0.0	chr6	41041326	41041365	(129764614)	+	(CCACCC)n	Simple_repeat	1	42	(0)	3380536
14	0.0	0.0	0.0	chr6	41200976	41200993	(129604986)	+	(CAG)n	Simple_repeat	1	18	(0)	3380773
29	24.1	5.8	1.6	chr6	41546257	41546376	(129259603)	+	(CTCG)n	Simple_repeat	1	127	(0)	3381373
19	18.9	0.0	0.0	chr6	41546926	41546967	(129259012)	+	(CTCG)n	Simple_repeat	1	42	(0)	3381375
15	6.2	2.6	7.5	chr6	41546996	41547034	(129258945)	+	(GCGCCGG)n	Simple_repeat	1	40	(0)	3381376
2306	9.0	0.3	0.0	chr6	42088733	42089042	(128716937)	C	AluSp	SINE/Alu	(0)	313	3	3382504
15	0.0	0.0	0.0	chr6	42104972	42104990	(128700989)	+	(CTC)n	Simple_repeat	1	19	(0)	3382540
351	24.3	5.3	0.0	chr6	42136878	42136984	(128668995)	+	MER5A1	DNA/hAT-Charlie	46	158	(8)	3382616
244	24.4	7.9	2.4	chr6	43013389	43013472	(127792507)	C	LTR50	LTR/ERVL	(552)	243	155	3384534
12	11.5	3.3	3.2	chr6	43076534	43076563	(127729416)	+	(CTG)n	Simple_repeat	1	31	(0)	3384639
193	25.0	2.3	9.7	chr6	43119508	43119600	(127686379)	+	MIR3	SINE/MIR	33	118	(90)	3384740
1934	26.5	8.5	0.9	chr6	43229621	43229933	(127576046)	+	L2a	LINE/L2	2402	2748	(671)	3384957
13	4.9	0.0	4.3	chr6	43667682	43667704	(127138275)	+	(CCT)n	Simple_repeat	1	23	(0)	3385799
187	24.6	5.5	0.0	chr6	43703352	43703420	(127102559)	+	MIR1_Amn	SINE/MIR	69	141	(89)	3385856
15	24.6	0.0	5.2	chr6	43770925	43770982	(127034997)	+	(AGCCG)n	Simple_repeat	1	58	(0)	3385989
23	22.1	1.7	0.0	chr6	43770967	43771024	(127034955)	+	GA-rich	Low_complexity	1	59	(0)	3385990
13	23.2	2.4	0.0	chr6	43771190	43771230	(127034749)	+	(AGCCGG)n	Simple_repeat	1	42	(0)	3385991
13	28.8	0.0	0.0	chr6	43785539	43785584	(127020395)	+	(TCCTCT)n	Simple_repeat	1	46	(0)	3386003
429	33.3	5.8	0.7	chr6	43894599	43894746	(126911233)	C	MIR3	SINE/MIR	(31)	177	22	3386204
2576	5.6	0.0	0.3	chr6	43894892	43895194	(126910785)	C	AluY	SINE/Alu	(9)	302	1	3386205
553	24.4	9.3	2.8	chr6	43915255	43915435	(126890544)	C	MIRb	SINE/MIR	(36)	232	39	3386242
216	11.9	0.0	6.7	chr6	43964494	43964538	(126841441)	C	MIR1_Amn	SINE/MIR	(75)	155	114	3386332
511	21.1	3.5	0.0	chr6	44059411	44059519	(126746460)	+	MIRb	SINE/MIR	84	196	(72)	3386490
279	26.7	6.5	0.0	chr6	44064351	44064451	(126741528)	+	MIR3	SINE/MIR	36	143	(65)	3386501
217	27.1	0.0	0.0	chr6	44064884	44064931	(126741048)	C	L2c	LINE/L2	(70)	3317	3270	3386502
25	22.7	3.2	4.1	chr6	44139018	44139111	(126666868)	+	(CTC)n	Simple_repeat	1	97	(0)	3386634
304	23.2	0.0	4.2	chr6	44225617	44225688	(126580291)	+	L2a	LINE/L2	3358	3426	(0)	3386817
335	16.9	15.2	3.1	chr6	44462327	44462424	(126343555)	+	L1MC5a	LINE/L1	446	557	(2220)	3387229
395	26.4	5.4	0.0	chr6	44476396	44476501	(126329478)	C	MER81	DNA/hAT-Blackjack	(0)	114	3	3387258
15	0.0	0.0	0.0	chr6	47478192	47478210	(123327769)	+	(GGA)n	Simple_repeat	1	19	(0)	3391825
2993	0.3	0.0	0.3	chr6	52995620	52995951	(117810028)	+	7SK	RNA	1	331	(0)	3399374
23	9.7	0.0	6.0	chr6	52995981	52996040	(117809939)	+	(TTTTTAA)n	Simple_repeat	1	56	(0)	3399375
1799	6.6	4.6	0.0	chr6	52996047	52996272	(117809707)	C	AluSx	SINE/Alu	(75)	237	1	3399376
19	7.2	0.0	0.0	chr6	53544648	53544676	(117261303)	+	(CCT)n	Simple_repeat	1	29	(0)	3400325
13	20.1	1.7	8.2	chr6	63572479	63572538	(107233441)	+	(CGGCT)n	Simple_repeat	1	61	(0)	3410802
39	4.7	0.0	0.0	chr6	73263040	73263084	(97542895)	+	(GGC)n	Simple_repeat	1	45	(0)	3423001
462	33.3	6.9	1.1	chr6	75176615	75176805	(95629174)	+	MIR	SINE/MIR	57	259	(3)	3425857
26	20.2	0.0	0.0	chr6	75284721	75284777	(95521202)	+	(CGCCGC)n	Simple_repeat	1	57	(0)	3425987
22	21.5	3.2	1.5	chr6	75284852	75284927	(95521052)	+	GA-rich	Low_complexity	1	77	(0)	3425988
9416	18.6	2.7	4.8	chr6	104656150	104657497	(66148482)	+	L1PA10	LINE/L1	737	2874	(4729)	3464275
27	22.9	3.4	5.0	chr6	110815172	110815241	(59990738)	+	(GCCGCCC)n	Simple_repeat	1	108	(13)	3474363
17	8.0	10.0	0.0	chr6	110815242	110815281	(59990698)	+	(CGCG)n	Simple_repeat	1	44	(0)	3474364
27	22.9	3.4	5.0	chr6	110815282	110815288	(59990691)	+	(GCCGCCC)n	Simple_repeat	109	121	(0)	3474363
18	24.6	0.0	0.0	chr6	116100826	116100873	(54705106)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3482130
57	41.1	0.0	1.4	chr6	125301977	125302258	(45503721)	+	(CCTCCC)n	Simple_repeat	1	282	(0)	3494128
481	6.2	0.0	0.0	chr6	125302382	125302445	(45503534)	+	MER72	LTR/ERV1	659	722	(0)	3494129
13	13.1	0.0	0.0	chr6	125790897	125790921	(45015058)	+	(CCT)n	Simple_repeat	1	25	(0)	3494827
28	2.7	0.0	6.8	chr6	135181329	135181372	(35624607)	+	(TCC)n	Simple_repeat	1	44	(0)	3508088
1404	25.9	6.1	9.1	chr6	137702648	137703605	(33102374)	+	L2a	LINE/L2	2473	3390	(36)	3511840
19	23.6	4.2	1.4	chr6	142945787	142945857	(27860122)	+	(CCGCCGG)n	Simple_repeat	1	74	(0)	3519177
32	12.6	0.0	0.0	chr6	142945960	142946012	(27859967)	+	(GAG)n	Simple_repeat	1	53	(0)	3519178
14	8.5	0.0	3.7	chr6	142946113	142946139	(27859840)	+	(GAGG)n	Simple_repeat	1	27	(0)	3519179
2969	7.9	5.4	0.5	chr6	149129006	149129047	(21676932)	C	MLT2A1	LTR/ERVL	(0)	444	403	3527950
222	30.8	13.9	0.0	chr6	149429469	149429598	(21376381)	+	MIRb	SINE/MIR	98	248	(20)	3528416
425	27.3	7.8	1.2	chr6	149429755	149429921	(21376058)	+	L1ME3Cz	LINE/L1	819	997	(0)	3528417
14	16.1	7.1	0.0	chr6	149863784	149863825	(20942154)	+	(CAGCTC)n	Simple_repeat	1	45	(0)	3529317
12	11.1	6.9	0.0	chr6	150084441	150084469	(20721510)	+	(CCTT)n	Simple_repeat	1	31	(0)	3529640
263	29.4	1.4	1.4	chr6	150084731	150084799	(20721180)	C	MIRb	SINE/MIR	(181)	87	19	3529641
15	18.4	0.0	7.8	chr6	150143197	150143247	(20662732)	+	(CGG)n	Simple_repeat	1	51	(0)	3529746
14	28.5	2.0	0.0	chr6	150143349	150143399	(20662580)	+	(GCA)n	Simple_repeat	1	52	(0)	3529747
16	14.9	0.0	0.0	chr6	156778732	156778761	(14027218)	+	(CCG)n	Simple_repeat	1	30	(0)	3539998
47	19.5	0.0	0.0	chr6	156778848	156778941	(14027038)	+	GA-rich	Low_complexity	1	94	(0)	3539999
35	8.0	0.0	1.8	chr6	156778946	156779000	(14026979)	+	(GGC)n	Simple_repeat	1	55	(0)	3540000
15	0.0	0.0	0.0	chr6	157144602	157144620	(13661359)	+	(GGA)n	Simple_repeat	1	19	(0)	3540488
20	3.8	0.0	0.0	chr6	157381083	157381109	(13424870)	+	(GAG)n	Simple_repeat	1	27	(0)	3540819
40	1.8	1.6	6.2	chr6	157774218	157774280	(13031699)	+	(GGAGTGGA)n	Simple_repeat	1	64	(0)	3541446
1404	24.6	11.4	3.0	chr6	157789805	157790269	(13015710)	C	MLT1J	LTR/ERVL-MaLR	(3)	509	1	3541477
19	17.9	0.0	4.2	chr6	157981785	157981832	(12824147)	+	GA-rich	Low_complexity	1	48	(0)	3541773
598	22.9	3.9	2.8	chr6	158701697	158701876	(12104103)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	286	3542973
330	25.0	15.9	0.0	chr6	159456190	159456305	(11349674)	+	MER5A1	DNA/hAT-Charlie	29	166	(0)	3544091
2165	12.8	0.3	0.0	chr6	159897894	159898191	(10907788)	C	AluSx	SINE/Alu	(13)	299	1	3544796
165	12.6	0.3	5.9	chr6	159898490	159898828	(10907151)	+	(CTC)n	Simple_repeat	1	340	(0)	3544797
28	17.5	2.3	5.7	chr6	160991642	160991727	(9814252)	+	(CGC)n	Simple_repeat	1	88	(0)	3546054
254	36.1	4.4	5.5	chr6	162847133	162847407	(7958572)	+	L2b	LINE/L2	2957	3228	(147)	3548731
36	5.0	0.0	0.0	chr6	163414675	163414716	(7391263)	+	(GAG)n	Simple_repeat	1	42	(0)	3549419
13	14.7	3.3	0.0	chr6	163414729	163414758	(7391221)	+	(GCG)n	Simple_repeat	1	31	(0)	3549420
20	27.9	1.3	1.3	chr6	163414841	163414930	(7391049)	+	(CGCCCGC)n	Simple_repeat	1	90	(0)	3549421
21	24.2	0.0	0.0	chr6	166486257	166486302	(4319677)	+	(CA)n	Simple_repeat	1	46	(0)	3553316
19	18.6	0.0	6.5	chr6	168106449	168106511	(2699468)	+	G-rich	Low_complexity	1	58	(0)	3555142
185	30.3	0.9	12.1	chr6	168106668	168106791	(2699188)	+	X6B_LINE	LINE/CR1	844	953	(119)	3555143
117	24.7	4.3	0.0	chr6	168448308	168448658	(2357321)	+	(GGATGG)n	Simple_repeat	1	366	(0)	3555497
403	22.6	7.3	0.0	chr6	169287617	169287718	(1518261)	C	MLT1D	LTR/ERVL-MaLR	(1)	504	395	3556312
322	32.8	3.8	0.6	chr6	170221934	170222114	(583865)	+	MER5A	DNA/hAT-Charlie	3	189	(0)	3557235
264	26.8	12.8	4.7	chr6	170222143	170222271	(583708)	C	MER5B	DNA/hAT-Charlie	(29)	149	9	3557236
18	18.1	0.0	0.0	chr6	170290494	170290526	(515453)	+	GA-rich	Low_complexity	1	33	(0)	3557299
16	16.6	0.0	6.5	chr7	272063	272108	(159073865)	+	GA-rich	Low_complexity	1	46	(0)	3558125
193	29.9	6.5	8.9	chr7	272213	272370	(159073603)	+	L2a	LINE/L2	2375	2528	(891)	3558126
244	29.1	2.3	2.3	chr7	413930	414017	(158931956)	+	MIR3	SINE/MIR	59	146	(62)	3558308
230	15.7	2.4	4.2	chr7	414074	414608	(158931365)	+	(CCT)n	Simple_repeat	1	548	(0)	3558309
89	21.3	5.6	2.0	chr7	445887	446170	(158899803)	+	G-rich	Low_complexity	1	300	(0)	3558352
556	32.9	5.0	3.1	chr7	465975	466296	(158879677)	+	L1ME2	LINE/L1	5787	6111	(51)	3558376
463	30.5	1.3	0.0	chr7	479300	479450	(158866523)	C	L1MD	LINE/L1	(747)	5495	5343	3558395
335	33.3	4.9	4.1	chr7	479463	479584	(158866389)	C	L2b	LINE/L2	(26)	3349	3227	3558396
2261	10.2	0.7	0.0	chr7	630951	631245	(158714728)	C	AluSx1	SINE/Alu	(10)	302	6	3558614
621	28.9	8.0	6.7	chr7	1075900	1076204	(158269769)	+	L1M4a2	LINE/L1	144	454	(2202)	3559239
488	28.4	9.7	0.8	chr7	1276588	1276832	(158069141)	C	L1ME3	LINE/L1	(99)	6063	5795	3559609
153	11.5	5.9	2.1	chr7	1277039	1277359	(158068614)	+	(CCTC)n	Simple_repeat	1	340	(0)	3559610
34	5.6	0.0	0.0	chr7	1404433	1404470	(157941503)	+	(CA)n	Simple_repeat	1	38	(0)	3559853
17	15.8	4.3	2.1	chr7	1404740	1404785	(157941188)	+	A-rich	Low_complexity	1	48	(0)	3559854
270	28.0	12.7	5.2	chr7	1462215	1462425	(157883548)	C	L2b	LINE/L2	(238)	3149	2921	3559946
2003	12.7	0.4	0.0	chr7	1462515	1462789	(157883184)	+	AluSx	SINE/Alu	1	276	(36)	3559947
164	23.1	2.2	0.5	chr7	1506507	1506914	(157839059)	+	(CCT)n	Simple_repeat	1	417	(0)	3559987
252	29.7	0.0	7.5	chr7	1506915	1507034	(157838939)	C	L1MA10	LINE/L1	(0)	6334	6224	3559988
1822	15.8	0.0	5.1	chr7	1764140	1764278	(157581695)	+	AluJb	SINE/Alu	7	136	(176)	3560445
503	24.5	4.1	0.0	chr7	2037216	2037354	(157308619)	C	L1MC3	LINE/L1	(15)	7770	7626	3560738
996	19.9	9.1	6.3	chr7	2815483	2815814	(156530159)	+	MER74A	LTR/ERVL	189	530	(28)	3562048
1153	8.4	0.0	0.0	chr7	4823174	4823316	(154522657)	+	AluSx	SINE/Alu	1	143	(169)	3565600
983	14.3	0.0	0.0	chr7	4823337	4823469	(154522504)	C	FLAM_C	SINE/Alu	(10)	133	1	3565601
225	30.2	12.8	0.8	chr7	5036325	5036441	(154309532)	C	L3	LINE/CR1	(78)	4021	3889	3566089
206	19.9	9.0	1.8	chr7	5282127	5282893	(154063080)	+	GA-rich	Low_complexity	1	836	(0)	3566683
15	5.5	0.0	0.0	chr7	5453301	5453319	(153892654)	+	(T)n	Simple_repeat	1	19	(0)	3567068
194	13.2	2.6	0.0	chr7	5596365	5596402	(153749571)	+	MIRc	SINE/MIR	113	151	(117)	3567438
205	13.6	10.2	0.0	chr7	5596372	5596415	(153749558)	+	MIR1_Amn	SINE/MIR	123	171	(59)	3567439
2494	7.7	0.0	0.3	chr7	5597384	5597695	(153748278)	+	AluSp	SINE/Alu	1	311	(2)	3567442
205	33.2	2.9	2.9	chr7	5598104	5598227	(153747746)	C	MIR1_Amn	SINE/MIR	(58)	210	86	3567443
32	25.1	4.2	6.7	chr7	8433260	8433473	(150912500)	+	(AGAGAC)n	Simple_repeat	1	223	(0)	3572496
13	13.0	5.6	2.6	chr7	20798416	20798451	(138547522)	+	(CTC)n	Simple_repeat	1	38	(0)	3588275
11	23.7	8.5	0.0	chr7	20798600	20798658	(138547315)	+	G-rich	Low_complexity	1	64	(0)	3588276
858	19.0	2.4	0.0	chr7	20798825	20798987	(138546986)	C	MER5A	DNA/hAT-Charlie	(22)	167	1	3588277
590	22.1	7.0	3.9	chr7	22561902	22562080	(136783893)	+	MER5A	DNA/hAT-Charlie	3	187	(2)	3590848
25	22.1	3.2	3.1	chr7	22562163	22562215	(136783758)	+	(TCTCTT)n	Simple_repeat	1	53	(0)	3590849
39	8.0	0.0	0.0	chr7	22562216	22562269	(136783704)	+	(CCT)n	Simple_repeat	1	54	(0)	3590850
25	22.1	3.2	3.1	chr7	22562270	22562300	(136783673)	+	(TCTCTT)n	Simple_repeat	6	36	(0)	3590851
30	0.0	0.0	0.0	chr7	22562301	22562328	(136783645)	+	(CTCC)n	Simple_repeat	1	28	(0)	3590852
399	32.5	5.0	1.3	chr7	22562352	22562582	(136783391)	+	MIRb	SINE/MIR	3	242	(26)	3590853
15	16.6	2.3	4.4	chr7	23470377	23470420	(135875553)	+	GA-rich	Low_complexity	1	45	(0)	3592400
25	6.7	3.8	5.5	chr7	23470542	23470594	(135875379)	+	GA-rich	Low_complexity	1	55	(0)	3592401
31	10.1	2.9	4.2	chr7	24573277	24573297	(134772676)	+	(GCG)n	Simple_repeat	1	20	(0)	3594106
38	0.0	0.0	0.0	chr7	24573298	24573332	(134772641)	+	(GGA)n	Simple_repeat	1	35	(0)	3594107
31	10.1	2.9	4.2	chr7	24573333	24573380	(134772593)	+	(GCG)n	Simple_repeat	3	50	(0)	3594108
16	10.0	4.0	7.7	chr7	24573401	24573450	(134772523)	+	G-rich	Low_complexity	1	52	(0)	3594109
25	20.8	1.3	5.0	chr7	24573501	24573579	(134772394)	+	(CGG)n	Simple_repeat	1	80	(0)	3594110
13	7.1	6.2	2.9	chr7	30594954	30594985	(128750988)	+	(TGCTGC)n	Simple_repeat	1	34	(0)	3603361
21	22.0	0.0	4.7	chr7	31057163	31057226	(128288747)	+	(CTCC)n	Simple_repeat	1	64	(0)	3604085
229	30.8	2.5	0.0	chr7	31057367	31057444	(128288529)	+	MIRb	SINE/MIR	87	166	(102)	3604086
11	23.9	4.5	0.0	chr7	35801027	35801070	(123544903)	+	(GAGCGG)n	Simple_repeat	1	46	(0)	3611238
38	2.6	0.0	0.0	chr7	39623633	39623671	(119722302)	+	(TCC)n	Simple_repeat	1	39	(0)	3616827
15	0.0	0.0	0.0	chr7	39949858	39949876	(119396097)	+	(GGC)n	Simple_repeat	1	19	(0)	3617484
27	13.8	5.1	4.8	chr7	42237522	42237600	(117108373)	+	(CTC)n	Simple_repeat	1	83	(0)	3620930
2222	7.8	1.1	0.0	chr7	44043567	44043850	(115302123)	C	AluY	SINE/Alu	(23)	288	2	3623736
11	24.0	2.6	0.0	chr7	44145166	44145204	(115200769)	+	(GGCCAC)n	Simple_repeat	1	40	(0)	3623873
209	26.6	5.9	0.0	chr7	44249963	44250026	(115095947)	C	L3b	LINE/CR1	(1075)	4157	4090	3623988
1278	14.6	0.0	10.6	chr7	44921349	44921537	(114424436)	+	AluSx3	SINE/Alu	133	302	(9)	3625170
606	22.9	3.1	3.7	chr7	45216070	45216232	(114129741)	C	MLT1A	LTR/ERVL-MaLR	(212)	162	1	3625665
273	27.3	13.8	0.0	chr7	45216597	45216739	(114129234)	+	LTR78	LTR/ERV1	1050	1215	(89)	3625666
636	33.4	13.3	0.5	chr7	47230699	47231125	(112114848)	+	L1M4	LINE/L1	5256	5745	(449)	3628261
23	13.1	0.0	0.0	chr7	47231142	47231183	(112114790)	+	(GGAGGAG)n	Simple_repeat	1	42	(0)	3628263
18	21.9	4.6	1.5	chr7	64495318	64495382	(94850591)	+	(GGCTGC)n	Simple_repeat	1	68	(0)	3646346
440	7.8	6.3	0.4	chr7	66098890	66099632	(93246341)	+	(AGG)n	Simple_repeat	1	790	(0)	3649224
22	11.9	0.0	0.0	chr7	66099714	66099750	(93246223)	+	(AGG)n	Simple_repeat	1	37	(0)	3649225
19	10.5	0.0	0.0	chr7	66099784	66099814	(93246159)	+	(AGG)n	Simple_repeat	1	31	(0)	3649225
30	0.0	0.0	0.0	chr7	66100213	66100240	(93245733)	+	(AGG)n	Simple_repeat	1	28	(0)	3649226
12	5.6	0.0	0.0	chr7	66100275	66100293	(93245680)	+	(AGG)n	Simple_repeat	1	19	(0)	3649226
20	5.3	10.0	0.0	chr7	66100325	66100364	(93245609)	+	GA-rich	Low_complexity	1	44	(0)	3649227
1294	17.3	7.4	3.2	chr7	66100374	66100656	(93245317)	+	AluSc8	SINE/Alu	2	297	(14)	3649228
844	21.6	3.2	1.1	chr7	66671637	66671817	(92674156)	+	AluJb	SINE/Alu	96	280	(32)	3650550
1783	16.2	0.7	0.0	chr7	66671818	66672095	(92673878)	C	AluJb	SINE/Alu	(12)	300	21	3650551
260	23.1	10.8	1.3	chr7	66698775	66698898	(92647075)	+	MIRc	SINE/MIR	27	175	(93)	3650619
317	27.6	8.7	3.5	chr7	72880255	72880427	(86465546)	C	MIR3	SINE/MIR	(7)	201	19	3663269
334	30.2	1.5	1.7	chr7	73588202	73588320	(85757653)	+	MIR	SINE/MIR	64	190	(18)	3664984
31	4.8	10.8	0.0	chr7	73588326	73588390	(85757583)	+	(TA)n	Simple_repeat	1	72	(0)	3664985
21	9.4	0.0	0.0	chr7	74051933	74051966	(85294007)	+	(CTGCAG)n	Simple_repeat	1	34	(0)	3666061
198	29.0	2.8	1.4	chr7	75990013	75990082	(83355891)	C	MIRb	SINE/MIR	(135)	133	63	3671061
11	17.9	0.0	10.9	chr7	75990337	75990391	(83355582)	+	(CACTCT)n	Simple_repeat	1	55	(0)	3671062
14	8.7	0.0	3.7	chr7	76069405	76069431	(83276542)	+	(AGG)n	Simple_repeat	1	27	(0)	3671251
2379	8.3	0.0	1.0	chr7	76395694	76395994	(82949979)	C	AluSq2	SINE/Alu	(15)	298	1	3672043
15	13.9	0.0	0.0	chr7	76396118	76396141	(82949832)	+	(A)n	Simple_repeat	1	24	(0)	3672044
2597	19.1	3.1	1.3	chr7	76396162	76396638	(82949335)	+	MER66B	LTR/ERV1	1	486	(0)	3672045
189	31.5	0.0	10.7	chr7	76404180	76404282	(82941691)	C	MIR3	SINE/MIR	(17)	191	100	3672065
1240	13.4	0.0	2.1	chr7	76404538	76404731	(82941242)	+	AluJr	SINE/Alu	29	218	(94)	3672066
3106	26.4	4.4	7.3	chr7	84780079	84781343	(74564630)	C	L1PA13	LINE/L1	(5466)	1319	14	3683961
1281	18.4	2.5	0.0	chr7	88610866	88611099	(70734874)	+	Tigger2b_Pri	DNA/TcMar-Tigger	829	1068	(0)	3688762
12	8.8	10.5	2.4	chr7	95772508	95772545	(63573428)	+	G-rich	Low_complexity	1	42	(0)	3698469
15	29.2	2.9	1.4	chr7	95772666	95772733	(63573240)	+	(CCG)n	Simple_repeat	1	70	(0)	3698470
81	31.2	2.1	5.0	chr7	98400244	98400714	(60945259)	+	G-rich	Low_complexity	1	481	(0)	3702486
212	32.6	7.8	0.0	chr7	99274454	99274548	(60071425)	+	L3	LINE/CR1	3890	3992	(107)	3704352
29	12.3	1.8	1.8	chr7	100124780	100124835	(59221138)	+	GA-rich	Low_complexity	1	57	(0)	3705904
29	2.2	5.9	3.7	chr7	100479256	100479306	(58866667)	+	(CTC)n	Simple_repeat	1	54	(0)	3706677
17	30.0	0.0	0.0	chr7	100479352	100479408	(58866565)	+	(CTGCTG)n	Simple_repeat	1	57	(0)	3706678
2325	8.6	2.0	0.0	chr7	100533017	100533308	(58812665)	+	AluSq	SINE/Alu	1	298	(15)	3706824
2391	8.1	0.3	0.3	chr7	100533701	100533996	(58811977)	+	AluSq2	SINE/Alu	2	297	(16)	3706825
18	18.6	0.0	0.0	chr7	100641124	100641160	(58704813)	+	(CTC)n	Simple_repeat	1	37	(0)	3707031
18	22.7	1.9	1.9	chr7	100683322	100683380	(58662593)	+	(CTG)n	Simple_repeat	1	59	(0)	3707131
1093	13.3	1.2	2.9	chr7	100799677	100799849	(58546124)	+	AluJr	SINE/Alu	24	193	(119)	3707403
332	17.1	3.5	1.3	chr7	100799850	100799924	(58546049)	C	FRAM	SINE/Alu	(84)	82	4	3707404
18	19.5	0.0	5.7	chr7	101163032	101163084	(58182889)	+	(CTC)n	Simple_repeat	1	53	(0)	3708138
34	18.5	2.2	3.2	chr7	101163297	101163387	(58182586)	+	G-rich	Low_complexity	1	93	(0)	3708139
876	18.8	0.0	4.2	chr7	101235270	101235434	(58110539)	C	AluJo	SINE/Alu	(25)	287	130	3708294
1012	18.0	0.0	0.0	chr7	101240292	101240458	(58105515)	C	FRAM	SINE/Alu	(5)	171	5	3708299
218	25.0	14.0	4.8	chr7	101252159	101252242	(58093731)	+	L2c	LINE/L2	3294	3386	(1)	3708330
830	9.3	4.8	0.0	chr7	101252592	101252709	(58093264)	+	L1PREC2	LINE/L1	6037	6160	(0)	3708331
158	20.2	3.7	1.4	chr7	101401391	101401791	(57944182)	+	GA-rich	Low_complexity	1	416	(0)	3708718
12	20.2	0.0	0.0	chr7	101729806	101729820	(57616153)	+	(GCTTTG)n	Simple_repeat	1	15	(0)	3709519
1782	14.6	1.7	2.3	chr7	101729821	101730122	(57615851)	C	AluJr	SINE/Alu	(12)	300	1	3709520
32	3.0	0.0	0.0	chr7	101739857	101739890	(57606083)	+	(GGA)n	Simple_repeat	1	34	(0)	3709551
2117	12.9	0.0	2.8	chr7	101740123	101740440	(57605533)	C	AluJr	SINE/Alu	(1)	311	3	3709552
36	2.7	0.0	0.0	chr7	101743688	101743725	(57602248)	+	(CCT)n	Simple_repeat	1	38	(0)	3709558
435	31.3	5.8	9.6	chr7	101747428	101747678	(57598295)	+	L2c	LINE/L2	3112	3352	(23)	3709569
285	16.9	0.0	3.3	chr7	101903518	101903578	(57442395)	C	MADE2	DNA/TcMar-Mariner	(13)	67	9	3709902
13	5.3	0.0	0.0	chr7	102396676	102396695	(56949278)	+	(GGA)n	Simple_repeat	1	20	(0)	3710915
22	11.3	0.0	0.0	chr7	105521796	105521833	(53824140)	+	(CGGGGAG)n	Simple_repeat	1	38	(0)	3716040
18	16.4	0.0	2.7	chr7	105521971	105522021	(53823952)	+	G-rich	Low_complexity	1	49	(0)	3716041
29	10.0	5.7	4.0	chr7	105876591	105876663	(53469310)	+	G-rich	Low_complexity	1	74	(0)	3716733
17	10.3	0.0	3.0	chr7	105876749	105876781	(53469192)	+	(CGCC)n	Simple_repeat	1	33	(0)	3716734
32	3.0	0.0	0.0	chr7	106023536	106023569	(53322404)	+	(TCC)n	Simple_repeat	1	34	(0)	3716979
291	33.1	7.7	1.3	chr7	106064651	106064809	(53281164)	C	MIRb	SINE/MIR	(61)	207	38	3717041
35	25.8	2.4	5.8	chr7	106112281	106112449	(53233524)	+	G-rich	Low_complexity	1	173	(0)	3717117
204	34.1	2.1	3.2	chr7	107080281	107080374	(52265599)	C	L2	LINE/L2	(2922)	497	405	3718571
13	18.4	0.0	0.0	chr7	112939646	112939676	(46406297)	+	(CTGCTC)n	Simple_repeat	1	31	(0)	3726479
19	15.6	2.2	2.2	chr7	112939728	112939797	(46406176)	+	(CGC)n	Simple_repeat	1	70	(0)	3726480
15	30.3	0.0	1.7	chr7	112939807	112939864	(46406109)	+	GA-rich	Low_complexity	1	58	(0)	3726481
15	21.1	1.9	3.7	chr7	116210745	116210797	(43135176)	+	(GCGCGCG)n	Simple_repeat	1	54	(0)	3730740
2300	12.1	0.3	1.0	chr7	116949892	116950196	(42395777)	C	AluSz	SINE/Alu	(9)	303	1	3731842
64	36.5	4.4	0.0	chr7	116950227	116950247	(42395726)	+	(CTCT)n	Simple_repeat	1	23	(0)	3731843
27	2.4	4.3	4.2	chr7	116950248	116950293	(42395680)	+	(CCTT)n	Simple_repeat	1	48	(0)	3731844
64	36.5	4.4	0.0	chr7	116950294	116950587	(42395386)	+	(CTCT)n	Simple_repeat	4	310	(0)	3731845
32	5.4	0.0	0.0	chr7	123662847	123662885	(35683088)	+	(CCT)n	Simple_repeat	1	39	(0)	3740779
17	11.1	0.0	0.0	chr7	123662901	123662929	(35683044)	+	(CCT)n	Simple_repeat	1	29	(0)	3740779
20	22.7	0.0	0.0	chr7	123692527	123692577	(35653396)	+	(AGGCGG)n	Simple_repeat	1	51	(0)	3740813
15	16.5	3.2	7.7	chr7	123692602	123692664	(35653309)	+	(AGGTGG)n	Simple_repeat	1	65	(0)	3740814
21	16.1	0.0	5.6	chr7	123692782	123692835	(35653138)	+	GA-rich	Low_complexity	1	54	(0)	3740815
14	12.5	0.0	0.0	chr7	123692845	123692870	(35653103)	+	(TGG)n	Simple_repeat	1	26	(0)	3740816
1146	17.0	6.6	11.8	chr7	128123855	128124143	(31221830)	C	AluJo	SINE/Alu	(39)	273	1	3746645
12	13.7	0.0	0.0	chr7	128783387	128783410	(30562563)	+	(CTG)n	Simple_repeat	1	24	(0)	3747962
653	0.0	0.0	0.0	chr7	128783450	128783521	(30562452)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	3747963
12	21.7	0.0	0.0	chr7	128791385	128791416	(30554557)	+	(CCCT)n	Simple_repeat	1	32	(0)	3747979
18	21.6	1.8	3.5	chr7	128946535	128946591	(30399382)	+	GA-rich	Low_complexity	1	58	(0)	3748191
677	27.3	11.0	0.3	chr7	129150501	129150729	(30195244)	+	MIRb	SINE/MIR	1	257	(11)	3748600
13	24.4	3.2	4.6	chr7	129150897	129150959	(30195014)	+	A-rich	Low_complexity	1	65	(0)	3748601
422	20.7	14.2	0.0	chr7	129843343	129843463	(29502510)	C	MIR	SINE/MIR	(21)	241	101	3749953
728	29.5	13.1	8.7	chr7	130143039	130143487	(29202486)	+	L2a	LINE/L2	2932	3403	(23)	3750660
15	23.7	0.0	5.8	chr7	131630391	131630442	(27715531)	+	(CCT)n	Simple_repeat	1	52	(0)	3753175
26	25.8	1.3	1.3	chr7	135509714	135509790	(23836183)	+	GA-rich	Low_complexity	1	78	(0)	3759070
286	31.5	8.0	8.5	chr7	138962929	138963129	(20382844)	+	L2b	LINE/L2	3180	3379	(8)	3764627
249	22.8	6.1	9.8	chr7	139321069	139321170	(20024803)	+	LTR78	LTR/ERV1	16	113	(1183)	3765327
609	24.9	4.2	1.1	chr7	139321261	139321443	(20024530)	+	LTR78	LTR/ERV1	193	381	(923)	3765327
434	29.8	14.7	1.2	chr7	139457381	139457550	(19888423)	+	MIRb	SINE/MIR	40	236	(32)	3765650
295	24.7	0.0	9.4	chr7	140242687	140242771	(19103202)	C	MER91A	DNA/hAT-Tip100	(1)	195	119	3766973
257	21.6	10.4	18.8	chr7	140297929	140298173	(19047800)	C	Charlie18a	DNA/hAT-Charlie	(2)	340	119	3767112
258	29.7	7.1	6.0	chr7	140298298	140298562	(19047411)	C	L1ME3D	LINE/L1	(6)	6236	5969	3767113
54	16.6	0.0	0.0	chr7	140298563	140298654	(19047319)	+	(AT)n	Simple_repeat	1	92	(0)	3767114
386	30.9	4.9	4.9	chr7	141976571	141976754	(17369219)	C	MIRb	SINE/MIR	(70)	198	15	3770046
12	20.0	0.0	0.0	chr7	149773212	149773240	(9572733)	+	(CTGA)n	Simple_repeat	1	29	(0)	3781159
887	28.0	14.8	3.0	chr7	149854553	149855044	(9490929)	C	MLT1E2	LTR/ERVL-MaLR	(64)	563	2	3781245
332	33.0	4.3	2.9	chr7	150204498	150204703	(9141270)	+	LTR78	LTR/ERV1	737	945	(359)	3781697
263	27.9	4.9	4.9	chr7	150204953	150205095	(9140878)	+	LTR78	LTR/ERV1	970	1112	(192)	3781697
13	21.7	0.0	2.6	chr7	150379505	150379543	(8966430)	+	(GGCCGG)n	Simple_repeat	1	39	(0)	3781973
711	17.2	8.2	1.3	chr7	150389921	150390070	(8955903)	C	L1MB4	LINE/L1	(8)	6172	6009	3781989
1151	27.4	12.6	1.5	chr7	150927536	150927931	(8418042)	+	LTR16A	LTR/ERVL	4	449	(2)	3782663
4298	22.4	11.7	7.8	chr7	150927934	150929968	(8416005)	+	L1MC5	LINE/L1	6771	8713	(591)	3782664
1962	9.3	8.0	0.7	chr7	151029042	151029319	(8316654)	+	AluSz6	SINE/Alu	1	300	(12)	3782809
11	20.5	5.1	0.0	chr7	151064364	151064402	(8281571)	+	G-rich	Low_complexity	1	41	(0)	3782844
14	15.9	0.0	0.0	chr7	151064672	151064699	(8281274)	+	GA-rich	Low_complexity	1	28	(0)	3782845
429	34.5	7.8	5.1	chr7	151110396	151110927	(8235046)	C	L2	LINE/L2	(407)	3012	2465	3782929
19	29.0	0.0	3.9	chr7	151251913	151251989	(8093984)	+	(GGCCC)n	Simple_repeat	1	77	(0)	3783106
12	20.4	8.6	1.6	chr7	151252224	151252281	(8093692)	+	GA-rich	Low_complexity	1	63	(0)	3783107
309	28.5	13.9	3.1	chr7	151831918	151832185	(7513788)	+	MamGypLTR1a	LTR/Gypsy	364	688	(96)	3784097
748	27.3	8.8	2.5	chr7	151925757	151926041	(7419932)	C	L3	LINE/CR1	(1597)	2502	2198	3784260
330	28.9	4.2	8.1	chr7	151926052	151926175	(7419798)	+	MIRb	SINE/MIR	18	136	(132)	3784262
694	26.8	11.9	6.8	chr7	151926204	151926681	(7419292)	+	MLT1H1	LTR/ERVL-MaLR	51	555	(0)	3784263
16	22.0	5.4	3.9	chr7	152025618	152025691	(7320282)	+	(CGCGG)n	Simple_repeat	1	78	(0)	3784462
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
27	33.2	0.0	0.0	chr7	153290072	153290158	(6055815)	+	G-rich	Low_complexity	1	87	(0)	3786753
248	23.6	7.5	6.8	chr7	153290165	153290296	(6055677)	+	LTR50	LTR/ERVL	141	273	(522)	3786754
248	33.6	1.8	0.0	chr7	155349768	155349874	(3996099)	C	HAL1	LINE/L1	(907)	1600	1492	3789534
196	34.1	13.3	0.6	chr7	155413014	155413190	(3932783)	C	L2	LINE/L2	(533)	2886	2684	3789603
993	19.3	3.2	13.1	chr7	157525139	157525524	(1820449)	+	L1MA5	LINE/L1	5198	5547	(765)	3792565
2081	23.2	2.4	0.0	chr7	157525839	157526567	(1819406)	+	L1MA5	LINE/L1	5513	6295	(5)	3792565
13	18.0	2.0	7.7	chr7	158385893	158385943	(960030)	+	(CCT)n	Simple_repeat	1	52	(0)	3793211
226	36.8	5.0	2.2	chr7	158386422	158386444	(959529)	C	MamRTE1	LINE/RTE-BovB	(3548)	264	125	3793212
238	34.5	3.5	2.6	chr7	158386445	158386557	(959416)	C	MamSINE1	SINE/tRNA-RTE	(80)	210	97	3793213
734	25.9	6.2	1.7	chr7	158387694	158387964	(958009)	+	MLT2C2	LTR/ERVL	156	526	(30)	3793214
227	20.9	0.0	0.0	chr7	158388015	158388057	(957916)	+	MLT2C2	LTR/ERVL	512	554	(6)	3793214
303	28.4	0.0	3.3	chr7	158821388	158821478	(524495)	C	L4_C_Mam	LINE/RTE-X	(189)	4949	4862	3793746
1963	14.6	1.7	0.0	chr7	158941600	158941887	(404086)	+	AluJb	SINE/Alu	1	293	(19)	3793934
825	20.2	0.5	5.5	chr7	158975450	158975648	(370325)	C	LOR1a	LTR/ERV1	(0)	497	309	3793976
1229	20.7	5.7	2.8	chr7	158975793	158975900	(370073)	+	L1MC1	LINE/L1	5992	6101	(232)	3793977
7628	12.1	5.6	2.4	chr7	158975901	158977135	(368838)	+	MER52C	LTR/ERV1	1	1276	(2)	3793978
196	27.7	9.8	7.5	chr7	159197235	159197394	(148579)	+	L2b	LINE/L2	3028	3191	(184)	3794189
561	22.4	3.7	0.0	chr8	291142	291297	(144847339)	+	MLT1B	LTR/ERVL-MaLR	194	355	(35)	3794670
64	32.8	0.4	2.0	chr8	2126352	2126598	(143012038)	+	(AC)n	Simple_repeat	1	248	(0)	3796452
28	27.3	4.8	1.5	chr8	8318772	8318897	(136819739)	+	(CGGCGG)n	Simple_repeat	1	132	(0)	3804519
2064	14.2	0.7	0.3	chr8	11787592	11787900	(133350736)	C	AluJb	SINE/Alu	(2)	310	1	3810158
411	30.8	3.3	2.7	chr8	11788045	11788194	(133350442)	C	MIRc	SINE/MIR	(52)	216	66	3810159
197	34.2	13.0	6.9	chr8	21779823	21780839	(123357797)	+	L2c	LINE/L2	1564	2648	(771)	3824998
4300	15.1	2.5	6.7	chr8	21885569	21885617	(123253019)	+	L1MB3	LINE/L1	6143	6182	(1)	3825215
283	29.5	14.1	1.2	chr8	21885623	21885862	(123252774)	+	L2a	LINE/L2	2807	3082	(337)	3825213
244	21.3	20.3	2.4	chr8	21885855	21885979	(123252657)	+	L2a	LINE/L2	3198	3350	(76)	3825213
2467	9.3	0.3	0.0	chr8	21903486	21903797	(123234839)	+	AluSp	SINE/Alu	1	313	(0)	3825260
3304	9.6	4.9	0.0	chr8	27278925	27279373	(117859263)	C	MER4A1	LTR/ERV1	(0)	472	1	3834103
287	30.8	12.2	1.9	chr8	27279723	27279884	(117858752)	C	L1ME4a	LINE/L1	(6310)	186	6	3834099
3795	18.9	5.8	6.5	chr8	27319870	27319986	(117818650)	C	MER21B	LTR/ERVL	(5)	863	730	3834180
2436	11.6	1.5	0.0	chr8	27319987	27320322	(117818314)	+	MER61A	LTR/ERV1	1	341	(0)	3834181
66	17.8	6.0	4.8	chr8	28402203	28402437	(116736199)	+	GA-rich	Low_complexity	1	249	(0)	3836061
12	17.6	0.0	0.0	chr8	28890070	28890096	(116248540)	+	(CCTTT)n	Simple_repeat	1	27	(0)	3837024
221	33.8	0.0	2.5	chr8	37822045	37822123	(107316513)	+	L2c	LINE/L2	3304	3380	(7)	3851042
29	0.0	0.0	0.0	chr8	37822385	37822409	(107316227)	+	(AC)n	Simple_repeat	1	25	(0)	3851043
27	22.6	4.8	2.8	chr8	38382201	38382303	(106756333)	+	(GCC)n	Simple_repeat	1	108	(0)	3852196
209	30.4	9.2	1.9	chr8	41697364	41697524	(103441112)	+	L2b	LINE/L2	3014	3187	(188)	3857452
170	18.1	1.6	2.4	chr8	43274747	43275122	(101863514)	+	(TCC)n	Simple_repeat	1	382	(0)	3860358
15	28.9	4.3	3.1	chr8	43275100	43275192	(101863444)	+	(CTTGTC)n	Simple_repeat	1	97	(0)	3860359
326	10.3	4.0	1.2	chr8	48192681	48193251	(96945385)	+	GA-rich	Low_complexity	1	594	(0)	3863087
562	26.7	10.7	4.8	chr8	58771475	58771702	(86366934)	C	L2a	LINE/L2	(0)	3426	3184	3877082
35	0.0	0.0	0.0	chr8	70403848	70403879	(74734757)	+	(CCT)n	Simple_repeat	1	32	(0)	3893736
182	30.9	9.3	9.8	chr8	73356735	73356949	(71781687)	+	L2b	LINE/L2	3139	3352	(23)	3897849
25	30.0	0.0	2.1	chr8	91040900	91040992	(54097644)	+	GA-rich	Low_complexity	1	93	(0)	3921972
231	21.9	0.0	5.9	chr8	96281702	96281769	(48856867)	+	LTR52	LTR/ERVL	57	120	(301)	3930034
315	26.8	11.3	0.7	chr8	96281826	96281967	(48856669)	+	MIR	SINE/MIR	79	247	(21)	3930035
2131	9.9	0.0	0.0	chr8	97735982	97736254	(47402382)	+	AluSx4	SINE/Alu	1	273	(37)	3932289
278	5.6	0.0	0.0	chr8	97736268	97736303	(47402333)	+	Alu	SINE/Alu	252	287	(14)	3932290
72	18.7	1.3	1.9	chr8	97736304	97736461	(47402175)	+	GA-rich	Low_complexity	1	160	(0)	3932291
424	30.3	4.3	1.3	chr8	97736531	97736679	(47401957)	C	MIRc	SINE/MIR	(55)	153	7	3932292
247	33.9	11.5	2.2	chr8	102541917	102542230	(42596406)	C	LTR85a	LTR/Gypsy?	(0)	702	356	3940592
664	14.6	0.0	11.7	chr8	102542301	102542437	(42596199)	C	FLAM_A	SINE/Alu	(11)	131	11	3940593
47	33.4	1.6	1.1	chr8	102542458	102542474	(42596162)	+	(TTCCTC)n	Simple_repeat	1	104	(84)	3940594
73	19.2	1.3	1.3	chr8	102542475	102542631	(42596005)	+	(TCC)n	Simple_repeat	1	159	(0)	3940595
13	18.9	6.0	1.9	chr8	104589053	104589102	(40549534)	+	(GCCGCCC)n	Simple_repeat	1	53	(0)	3943937
8000	12.8	1.9	0.2	chr8	116912388	116913667	(28224969)	C	L1PA10	LINE/L1	(5042)	1311	10	3960816
14	26.0	1.7	3.3	chr8	125430092	125430171	(19708465)	+	(CCCCTCT)n	Simple_repeat	1	78	(0)	3975579
21	14.6	0.0	0.0	chr8	125430292	125430329	(19708307)	+	(AGG)n	Simple_repeat	1	38	(0)	3975580
245	34.6	7.2	2.2	chr8	127899382	127899564	(17239072)	+	MIRc	SINE/MIR	31	223	(45)	3980359
2376	11.0	0.0	0.0	chr8	127900031	127900340	(17238296)	C	AluSc8	SINE/Alu	(1)	310	1	3980360
325	31.9	0.0	8.5	chr8	130377464	130377593	(14761043)	C	L2b	LINE/L2	(1)	3386	3256	3984877
233	27.6	1.0	10.9	chr8	130377630	130377739	(14760897)	+	LTR33	LTR/ERVL	75	173	(342)	3984878
295	23.3	18.2	3.0	chr8	130377789	130377987	(14760649)	+	LTR33	LTR/ERVL	280	515	(0)	3984878
99	20.1	6.1	3.9	chr8	140457828	140458190	(4680446)	+	GA-rich	Low_complexity	1	385	(0)	4001984
213	23.5	0.0	3.8	chr8	140458276	140458328	(4680308)	+	L2b	LINE/L2	3099	3149	(226)	4001985
346	24.1	6.1	10.7	chr8	140464199	140464319	(4674317)	+	L2b	LINE/L2	3260	3374	(1)	4002004
383	26.1	2.8	5.7	chr8	140507389	140507598	(4631038)	C	LTR33A_	LTR/ERVL	(239)	264	61	4002110
110	22.6	2.8	1.4	chr8	141937300	141937586	(3201050)	+	(CTCC)n	Simple_repeat	1	295	(0)	4004326
174	12.7	1.8	6.0	chr8	141998007	141998402	(3140234)	+	(CAGCA)n	Simple_repeat	1	403	(0)	4004394
204	15.6	5.5	1.9	chr8	142260967	142261455	(2877181)	+	G-rich	Low_complexity	1	516	(0)	4004720
296	24.0	3.9	0.0	chr8	142289225	142289299	(2849337)	+	MER92D	LTR/ERV1	31	108	(212)	4004742
12	30.3	1.7	1.7	chr8	142545945	142546002	(2592634)	+	(CCCCTCA)n	Simple_repeat	1	59	(0)	4005030
33	13.0	3.5	14.1	chr8	142939668	142939893	(2198743)	+	(CCACCATC)n	Simple_repeat	1	234	(0)	4005476
660	19.7	1.3	1.9	chr8	143015998	143016152	(2122484)	+	MER21A	LTR/ERVL	120	273	(658)	4005586
1750	19.7	0.3	0.0	chr8	143291958	143292257	(1846379)	C	AluJb	SINE/Alu	(11)	301	1	4006028
13	20.2	0.0	6.7	chr8	143294085	143294129	(1844507)	+	(CCT)n	Simple_repeat	1	45	(0)	4006030
195	30.9	7.5	2.4	chr8	143332573	143332698	(1805938)	C	L2	LINE/L2	(547)	2872	2740	4006080
184	32.9	2.5	4.8	chr8	143395925	143396007	(1742629)	C	L2c	LINE/L2	(238)	3149	3069	4006163
201	32.3	4.1	4.1	chr8	143396211	143396307	(1742329)	C	MIR3	SINE/MIR	(91)	117	21	4006164
218	33.7	0.0	0.0	chr8	143554051	143554139	(1584497)	C	L2	LINE/L2	(1500)	1919	1831	4006327
69	43.4	2.9	0.0	chr8	143554353	143554805	(1583831)	+	(AC)n	Simple_repeat	1	466	(0)	4006328
3136	13.4	1.5	7.8	chr8	144369497	144369696	(768940)	C	LTR27B	LTR/ERV1	(400)	194	1	4007526
1526	18.0	2.8	1.1	chr8	144369717	144369805	(768831)	+	AluJr	SINE/Alu	12	106	(206)	4007529
2557	6.8	0.3	0.0	chr8	144369806	144370115	(768521)	+	AluSp	SINE/Alu	1	311	(2)	4007530
25	31.3	1.7	2.5	chr8	144478236	144478354	(660282)	+	GA-rich	Low_complexity	1	121	(0)	4007652
287	25.8	8.5	2.0	chr8	144478530	144478628	(660008)	C	MIRc	SINE/MIR	(73)	195	90	4007653
189	34.3	0.0	1.5	chr8	144478678	144478745	(659891)	+	MIR3	SINE/MIR	91	157	(51)	4007654
2408	10.0	0.0	0.0	chr8	144786352	144786660	(351976)	+	AluSx1	SINE/Alu	1	309	(3)	4008105
25	17.5	1.6	1.6	chr8	144786661	144786711	(351925)	+	GA-rich	Low_complexity	11	61	(0)	4008106
2326	9.4	0.0	0.0	chr8	144798184	144798482	(340154)	+	AluSq2	SINE/Alu	1	299	(14)	4008118
18	22.2	2.1	0.0	chr9	10612728	10612774	(127781943)	+	GA-rich	Low_complexity	1	48	(0)	4024011
24	9.0	1.9	5.6	chr9	10612946	10612998	(127781719)	+	(CGCT)n	Simple_repeat	1	54	(0)	4024012
17	20.5	3.8	1.8	chr9	14315509	14315561	(124079156)	+	(GGCGG)n	Simple_repeat	1	55	(0)	4028787
824	25.5	2.6	0.0	chr9	36945751	36945938	(101448779)	+	MIR	SINE/MIR	53	245	(17)	4061758
979	32.5	10.9	2.7	chr9	36946392	36947218	(101447499)	C	L4_A_Mam	LINE/RTE-X	(2140)	2850	1947	4061756
57	20.8	2.5	3.1	chr9	37380043	37380200	(101014517)	+	GA-rich	Low_complexity	1	162	(0)	4062535
647	32.2	4.9	2.8	chr9	37392515	37392910	(101001807)	+	MLT1K	LTR/ERVL-MaLR	181	585	(10)	4062565
17	9.1	2.6	5.0	chr9	37785063	37785101	(100609616)	+	(CCGCTT)n	Simple_repeat	1	40	(0)	4063381
563	19.4	14.3	5.3	chr9	37928421	37928610	(100466107)	+	MER20	DNA/hAT-Charlie	1	210	(9)	4063662
19	20.6	0.0	0.0	chr9	69174299	69174343	(69220374)	+	(AGCAGG)n	Simple_repeat	1	45	(0)	4081172
188	26.4	15.5	1.8	chr9	69175135	69175300	(69219417)	+	LFSINE_Vert	SINE/tRNA	6	198	(261)	4081174
16	13.2	4.4	4.3	chr9	72364921	72364965	(66029752)	+	GA-rich	Low_complexity	1	47	(0)	4086363
643	14.9	0.9	0.9	chr9	72527235	72527342	(65867375)	+	U13	snRNA	1	108	(0)	4086709
1748	16.2	1.8	2.4	chr9	76683982	76684309	(61710408)	C	L1MA7	LINE/L1	(29)	6262	5937	4093004
36	28.8	4.7	2.5	chr9	78031679	78031871	(60362846)	+	(GCCCCC)n	Simple_repeat	1	202	(0)	4095147
23	18.4	3.1	3.0	chr9	78031965	78032029	(60362688)	+	GA-rich	Low_complexity	1	67	(0)	4095148
24	21.3	2.5	3.6	chr9	78032030	78032043	(60362674)	+	G-rich	Low_complexity	3	83	(0)	4095149
11	13.2	5.7	2.7	chr9	91162834	91162868	(47231849)	+	(CTGTGC)n	Simple_repeat	1	37	(0)	4114813
40	5.0	3.0	2.9	chr9	92514813	92514878	(45879839)	+	(TCC)n	Simple_repeat	1	68	(0)	4116835
15	24.4	2.1	0.0	chr9	92514909	92514956	(45879761)	+	(CTCCT)n	Simple_repeat	1	49	(0)	4116836
12	12.0	3.7	0.0	chr9	93295403	93295429	(45099288)	+	(TTTTA)n	Simple_repeat	1	28	(0)	4117973
183	30.7	2.2	1.1	chr9	95411761	95411849	(42982868)	C	MIR3	SINE/MIR	(57)	151	62	4121186
1247	19.5	4.6	9.0	chr9	98119604	98119781	(40274936)	C	MER65A	LTR/ERV1	(2)	443	282	4125847
266	22.4	7.8	9.3	chr9	98142251	98142368	(40252349)	C	MIR3	SINE/MIR	(89)	141	26	4125902
16	15.4	4.4	2.1	chr9	98142788	98142832	(40251885)	+	(CCCAC)n	Simple_repeat	1	47	(0)	4125903
13	12.1	0.0	3.5	chr9	98255746	98255774	(40138943)	+	(GCCAC)n	Simple_repeat	1	29	(0)	4126182
1759	12.0	7.7	1.7	chr9	98256345	98256636	(40138081)	C	AluJr	SINE/Alu	(0)	312	2	4126183
238	33.3	12.0	3.6	chr9	98571756	98572166	(39822551)	C	L3	LINE/CR1	(134)	3965	3516	4126775
16	19.1	0.0	4.3	chr9	100098878	100098923	(38295794)	+	(GGCTG)n	Simple_repeat	1	46	(0)	4129547
17	10.0	0.0	5.6	chr9	105694838	105694873	(32699844)	+	G-rich	Low_complexity	1	36	(0)	4137932
12	25.1	4.3	0.0	chr9	105695159	105695205	(32699512)	+	(CTCG)n	Simple_repeat	1	49	(0)	4137933
3137	18.5	3.8	15.2	chr9	105712971	105714397	(32680320)	+	MER52D	LTR/ERV1	56	1537	(586)	4137970
13	27.4	0.0	6.2	chr9	111484194	111484257	(26910460)	+	G-rich	Low_complexity	1	64	(0)	4147933
24	18.9	4.4	1.4	chr9	112750624	112750691	(25644026)	+	(CCTC)n	Simple_repeat	1	71	(0)	4150443
35	10.1	0.0	0.0	chr9	113565383	113565435	(24829282)	+	(GGA)n	Simple_repeat	1	53	(0)	4151919
48	0.0	0.0	0.0	chr9	113565876	113565916	(24828801)	+	(TG)n	Simple_repeat	1	41	(0)	4151920
188	18.0	3.7	3.0	chr9	113686982	113687464	(24707253)	+	GA-rich	Low_complexity	1	501	(0)	4152181
181	33.1	7.5	1.6	chr9	114186660	114186785	(24207932)	C	L2c	LINE/L2	(510)	2909	2776	4153129
204	33.3	16.4	3.1	chr9	121286416	121286709	(17108008)	+	L2b	LINE/L2	2970	3310	(65)	4166674
25	20.1	0.0	3.0	chr9	122228850	122228915	(16165802)	+	(GGCCCC)n	Simple_repeat	1	66	(0)	4168589
37	22.7	0.0	0.0	chr9	122228971	122229053	(16165664)	+	(CCT)n	Simple_repeat	1	83	(0)	4168590
20	30.4	0.0	2.9	chr9	122229146	122229214	(16165503)	+	(AC)n	Simple_repeat	1	69	(0)	4168591
36	4.6	0.0	2.1	chr9	122905288	122905334	(15489383)	+	(CCT)n	Simple_repeat	1	47	(0)	4169756
227	29.2	3.3	5.3	chr9	123300957	123301050	(15093667)	+	MIRc	SINE/MIR	14	109	(159)	4170444
245	29.4	4.7	1.9	chr9	123654681	123654784	(14739933)	C	UCON78	DNA	(67)	376	270	4171090
359	28.3	11.1	0.0	chr9	123655056	123655207	(14739510)	+	L2c	LINE/L2	3042	3212	(175)	4171091
24	30.5	1.7	3.3	chr9	124011383	124011501	(14383216)	+	(CTCCCTC)n	Simple_repeat	1	121	(0)	4171699
41	6.1	0.0	0.0	chr9	124011714	124011764	(14382953)	+	(CTC)n	Simple_repeat	1	51	(0)	4171700
220	29.5	7.8	2.0	chr9	124477476	124477584	(13917133)	C	MIRb	SINE/MIR	(93)	175	60	4172656
17	8.2	0.0	0.0	chr9	124869371	124869396	(13525321)	+	(GGC)n	Simple_repeat	1	26	(0)	4173431
12	22.8	3.2	6.2	chr9	126914557	126914619	(11480098)	+	G-rich	Low_complexity	1	65	(0)	4177308
19	23.6	0.0	8.1	chr9	126914809	126914895	(11479822)	+	(CGGCC)n	Simple_repeat	1	87	(0)	4177309
14	30.1	3.3	3.2	chr9	127612184	127612273	(10782444)	+	(CCCCGC)n	Simple_repeat	1	93	(0)	4178642
202	34.7	6.9	0.0	chr9	127770405	127770499	(10624218)	C	MIR3	SINE/MIR	(25)	183	82	4178977
253	27.4	2.3	5.6	chr9	127862879	127862967	(10531750)	+	MER5A1	DNA/hAT-Charlie	81	166	(0)	4179194
252	28.4	0.5	3.0	chr9	128149892	128149971	(10244746)	C	MIR1_Amn	SINE/MIR	(77)	191	112	4179846
2095	10.9	1.4	1.7	chr9	128193429	128193721	(10200996)	+	AluSx1	SINE/Alu	3	294	(18)	4179941
20	19.5	4.3	0.0	chr9	128225867	128225913	(10168804)	+	(TC)n	Simple_repeat	1	49	(0)	4180024
15	21.1	6.1	0.0	chr9	128225976	128226024	(10168693)	+	(CTC)n	Simple_repeat	1	52	(0)	4180025
15	7.8	0.0	6.5	chr9	128232165	128232195	(10162522)	+	(CCT)n	Simple_repeat	1	31	(0)	4180043
59	0.0	0.0	0.0	chr9	128239568	128239617	(10155100)	+	(GT)n	Simple_repeat	1	50	(0)	4180062
233	21.4	7.0	0.0	chr9	128249888	128249958	(10144759)	+	MIR3	SINE/MIR	73	145	(63)	4180076
17	13.6	5.8	3.6	chr9	128251261	128251312	(10143405)	+	(TCCTCCAT)n	Simple_repeat	1	55	(0)	4180077
273	20.0	3.0	1.5	chr9	128310037	128310102	(10084615)	+	MER5A1	DNA/hAT-Charlie	45	111	(55)	4180214
1842	13.3	1.0	1.9	chr9	128655933	128656240	(9738477)	+	AluJb	SINE/Alu	8	312	(0)	4181001
11	7.5	6.7	3.1	chr9	129402059	129402088	(8992629)	+	(CTGAGC)n	Simple_repeat	1	32	(0)	4182734
63	12.6	6.6	3.4	chr9	129402088	129402257	(8992460)	+	(CTCCTCC)n	Simple_repeat	1	175	(0)	4182735
244	25.7	9.3	2.4	chr9	129490155	129490307	(8904410)	+	L2b	LINE/L2	2941	3118	(257)	4182958
261	27.3	10.0	1.4	chr9	129568536	129568690	(8826027)	C	MIRb	SINE/MIR	(42)	188	20	4183149
28	12.3	0.0	8.2	chr9	129568829	129568901	(8825816)	+	G-rich	Low_complexity	1	73	(0)	4183150
210	15.6	4.2	0.0	chr9	129569593	129569637	(8825080)	+	MIRc	SINE/MIR	103	149	(119)	4183153
520	28.0	9.2	3.7	chr9	129569735	129569949	(8824768)	C	L2a	LINE/L2	(16)	3410	3183	4183154
270	17.3	1.9	0.0	chr9	129570978	129571029	(8823688)	C	L2a	LINE/L2	(0)	3426	3374	4183155
1535	26.3	3.9	0.2	chr9	129584150	129584572	(8810145)	+	MLT1J	LTR/ERVL-MaLR	36	474	(38)	4183189
279	33.5	10.2	0.3	chr9	129584607	129584871	(8809846)	C	L2a	LINE/L2	(64)	3362	3034	4183190
253	29.0	1.0	6.3	chr9	129584872	129584999	(8809718)	+	MIR3	SINE/MIR	2	123	(107)	4183191
202	26.7	2.2	0.0	chr9	129585000	129585044	(8809673)	+	MIRb	SINE/MIR	206	251	(17)	4183187
1890	16.4	3.6	0.0	chr9	129585064	129585356	(8809361)	+	AluJb	SINE/Alu	5	308	(4)	4183192
20	12.3	7.0	3.3	chr9	129777606	129777662	(8617055)	+	(TCC)n	Simple_repeat	1	61	(0)	4183609
249	20.5	4.3	16.4	chr9	129862936	129863030	(8531687)	C	MLT1B	LTR/ERVL-MaLR	(309)	81	2	4183805
59	18.8	0.6	5.1	chr9	130138405	130138560	(8256157)	+	(CCCTCC)n	Simple_repeat	1	157	(0)	4184390
46	21.8	4.4	4.8	chr9	130138561	130138583	(8256134)	+	(TCCTCT)n	Simple_repeat	2	188	(0)	4184391
434	22.6	0.0	6.2	chr9	131762816	131762928	(6631789)	+	MIR	SINE/MIR	60	165	(97)	4187648
56	13.2	0.0	0.0	chr9	132185823	132185913	(6208804)	+	(GGA)n	Simple_repeat	1	91	(0)	4188391
2094	11.4	1.0	2.6	chr9	132812229	132812534	(5582183)	C	AluSx1	SINE/Alu	(7)	305	5	4189541
13	13.0	0.0	3.6	chr9	132984336	132984363	(5410354)	+	GA-rich	Low_complexity	1	28	(0)	4189858
194	31.6	1.2	1.2	chr9	132984414	132984493	(5410224)	C	MIR3	SINE/MIR	(3)	205	126	4189859
207	30.9	1.4	0.0	chr9	132984663	132984730	(5409987)	C	MIRb	SINE/MIR	(83)	185	117	4189860
30	9.5	0.0	0.0	chr9	133057875	133057919	(5336798)	+	(GGA)n	Simple_repeat	1	45	(0)	4189994
209	20.3	1.2	1.9	chr9	133490702	133491182	(4903535)	+	GA-rich	Low_complexity	1	487	(0)	4190670
215	30.6	4.0	1.4	chr9	133491278	133491350	(4903367)	+	MIRb	SINE/MIR	91	165	(103)	4190668
14	9.6	0.0	0.0	chr9	133529895	133529917	(4864800)	+	(AGG)n	Simple_repeat	1	23	(0)	4190729
209	26.9	5.6	5.0	chr9	133575946	133576086	(4818631)	C	L2b	LINE/L2	(182)	3193	3052	4190783
294	23.3	2.7	1.4	chr9	133842478	133842551	(4552166)	C	MER81	DNA/hAT-Blackjack	(7)	107	33	4191150
159	26.4	0.5	1.1	chr9	134024899	134025331	(4369386)	+	(CTC)n	Simple_repeat	1	435	(0)	4191431
13	20.6	2.1	4.1	chr9	134339109	134339156	(4055561)	+	G-rich	Low_complexity	1	49	(0)	4191914
148	39.2	0.3	1.1	chr9	134339410	134339743	(4054974)	+	(GT)n	Simple_repeat	1	333	(0)	4191915
147	12.1	0.4	2.4	chr9	136181700	136181950	(2212767)	+	(GGAA)n	Simple_repeat	1	252	(0)	4194126
649	23.1	0.0	0.0	chr9	136398077	136398206	(1996511)	C	FLAM_A	SINE/Alu	(12)	130	1	4194333
180	33.2	10.1	0.5	chr9	137254506	137254693	(1140024)	C	L2c	LINE/L2	(230)	3157	2950	4195390
103	40.8	2.5	3.7	chrX	1392922	1393431	(154647464)	+	(TCTT)n	Simple_repeat	1	503	(0)	4360888
13	17.0	3.0	0.0	chrX	2692789	2692821	(153348074)	+	(TTCC)n	Simple_repeat	1	34	(0)	4363385
17	25.9	4.3	4.1	chrX	10014884	10014977	(146025918)	+	GA-rich	Low_complexity	1	98	(0)	4375803
56	3.5	0.0	0.0	chrX	11427806	11427864	(144613031)	+	(GGA)n	Simple_repeat	1	59	(0)	4377997
20	30.5	2.3	1.1	chrX	12791390	12791475	(143249420)	+	(GCC)n	Simple_repeat	1	88	(0)	4380115
12	20.8	8.0	0.0	chrX	25013153	25013202	(131027693)	+	(GCAGCG)n	Simple_repeat	1	54	(0)	4400465
30	31.1	0.0	0.0	chrX	25013231	25013325	(131027570)	+	(TCC)n	Simple_repeat	1	95	(0)	4400466
38	4.8	0.0	0.0	chrX	25013654	25013697	(131027198)	+	(GCC)n	Simple_repeat	1	44	(0)	4400467
38	15.1	2.4	2.3	chrX	40097986	40098134	(115942761)	+	(TCCC)n	Simple_repeat	1	149	(0)	4421763
13	13.2	0.0	9.8	chrX	48467621	48467661	(107573234)	+	GA-rich	Low_complexity	1	41	(0)	4436136
15	19.6	2.0	3.9	chrX	49043230	49043279	(106997616)	+	(GCCCG)n	Simple_repeat	1	51	(0)	4437371
18	15.3	0.0	2.6	chrX	49043454	49043492	(106997403)	+	(CCT)n	Simple_repeat	1	39	(0)	4437372
305	37.9	7.3	1.3	chrX	53281744	53281973	(102758922)	C	MIRb	SINE/MIR	(23)	245	1	4443385
37	0.0	0.0	0.0	chrX	54482237	54482268	(101558627)	+	(CA)n	Simple_repeat	1	32	(0)	4445905
235	33.9	4.8	0.2	chrX	54640098	54640214	(101400681)	+	L2c	LINE/L2	3224	3343	(44)	4446205
1375	18.4	8.6	10.6	chrX	68571200	68571605	(87469290)	+	MLT1F1	LTR/ERVL-MaLR	1	397	(172)	4456595
17	17.6	0.0	5.9	chrX	107741826	107741876	(48299019)	+	GA-rich	Low_complexity	1	51	(0)	4504741
31	0.0	3.1	0.0	chrX	119758501	119758532	(36282363)	+	(CCT)n	Simple_repeat	1	33	(0)	4521757
251	31.6	8.1	2.2	chrX	129636062	129636200	(26404695)	C	MIRc	SINE/MIR	(40)	228	81	4535015
18	16.8	0.0	0.0	chrX	130268800	130268834	(25772061)	+	GA-rich	Low_complexity	1	35	(0)	4536265
14	14.2	3.2	0.0	chrX	150898644	150898674	(5142221)	+	GA-rich	Low_complexity	1	32	(0)	4566674
15	4.7	4.5	0.0	chrX	150898705	150898726	(5142169)	+	(GC)n	Simple_repeat	1	23	(0)	4566675
22	17.2	0.0	0.0	chrX	152137416	152137454	(3903441)	+	G-rich	Low_complexity	1	39	(0)	4568565
11	26.1	0.0	4.3	chrX	153687554	153687599	(2353296)	+	G-rich	Low_complexity	1	46	(0)	4570607
16	31.1	1.2	3.5	chrX	153687786	153687869	(2353026)	+	(GGCG)n	Simple_repeat	1	85	(0)	4570608