2093	9.6	10.2	2.7	chr1	45422073	45422405	(203534017)	+	L1PA8A	LINE/L1	5770	6130	(1)	87967
2303	10.3	0.0	0.0	chr1	45422453	45422743	(203533679)	C	AluSx	SINE/Alu	(21)	291	1	87968
181	31.8	3.4	1.2	chr1	55340160	55340245	(193616177)	+	L2b	LINE/L2	2887	2974	(445)	106916
367	38.0	6.6	10.5	chr1	55340277	55340656	(193615766)	+	L2b	LINE/L2	3023	3386	(1)	106916
18	18.3	0.0	2.2	chr1	91980699	91980743	(156975679)	+	A-rich	Low_complexity	1	45	(0)	163649
2836	22.0	4.1	2.5	chr1	113479399	113480843	(135475579)	C	L1M3c	LINE/L1	(4387)	2720	3	195092
1929	6.7	0.5	0.0	chr1	185078764	185078987	(63877435)	+	AluSx	SINE/Alu	2	226	(86)	273701
17	22.5	0.0	0.0	chr1	185079075	185079110	(63877312)	+	(T)n	Simple_repeat	1	36	(0)	273702
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
21084	9.6	2.5	0.5	chr1	213146725	213150295	(35806127)	C	L1MA1	LINE/L1	(684)	7037	3390	315794
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
854	20.2	10.7	2.0	chr10	7223490	7223737	(126573685)	C	L1MEb	LINE/L1	(5129)	1071	800	380688
724	24.2	3.3	1.1	chr10	7223746	7223925	(126573497)	C	MER5A	DNA/hAT-Charlie	(5)	184	1	380693
1987	27.7	4.1	7.5	chr10	7223940	7224721	(126572701)	C	L1MEb	LINE/L1	(5307)	787	34	380688
6984	13.4	5.8	3.7	chr10	16299910	16301027	(117496395)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	79	395540
2361	11.0	1.0	0.3	chr10	16301028	16301328	(117496094)	C	AluSq2	SINE/Alu	(10)	303	1	395541
281	16.7	0.0	0.0	chr10	20701041	20701088	(113096334)	+	MER63D	DNA/hAT-Blackjack	1013	1060	(1)	402397
423	30.3	3.5	0.4	chr10	20701163	20701443	(113095979)	C	L1MEf	LINE/L1	(5332)	1083	802	402396
183	31.7	1.6	0.0	chr10	84519733	84519792	(49277630)	C	L2c	LINE/L2	(38)	3349	3289	496987
205	29.8	13.6	5.1	chr10	84519910	84520164	(49277258)	C	L3	LINE/CR1	(1822)	2277	1998	496986
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
2337	10.9	0.0	0.0	chr12	119649016	119649326	(13625983)	+	AluSq	SINE/Alu	1	311	(2)	965249
15	8.0	0.0	3.5	chr12	119649329	119649357	(13625952)	+	(AGAAA)n	Simple_repeat	1	29	(0)	965250
410	26.7	7.6	5.8	chr13	61828311	61828517	(52535811)	+	MER106B	DNA/hAT-Charlie	843	1053	(6)	1055248
1213	20.3	2.2	1.4	chr13	61828558	61828779	(52535549)	C	AluJb	SINE/Alu	(12)	300	77	1055249
939	26.8	11.8	3.0	chr13	71492249	71492648	(42871680)	+	MLT1D	LTR/ERVL-MaLR	64	503	(2)	1067514
471	24.0	5.7	6.0	chr13	71492654	71492729	(42871599)	C	L1MC4	LINE/L1	(75)	7967	7893	1067513
41	6.4	0.0	0.0	chr13	71492730	71492778	(42871550)	+	(TG)n	Simple_repeat	1	49	(0)	1067515
2697	3.4	0.0	0.0	chr14	101886000	101886297	(5157421)	+	AluY	SINE/Alu	1	298	(13)	1253810
1957	14.1	0.0	3.0	chr14	101886710	101887034	(5156684)	C	AluJr	SINE/Alu	(0)	312	1	1253811
622	29.9	4.3	2.4	chr15	79765192	79765397	(22225792)	C	MER63A	DNA/hAT-Blackjack	(0)	210	1	1358342
1659	28.4	6.9	2.7	chr15	79765398	79766305	(22224884)	C	L1MCc	LINE/L1	(5135)	1902	813	1358341
464	31.2	4.2	0.5	chr16	1025755	1025960	(89312385)	C	MER2	DNA/TcMar-Tigger	(130)	215	2	1395420
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
1950	25.2	12.4	2.6	chr16	53571062	53572280	(36766065)	+	L1MEb	LINE/L1	1122	2510	(4592)	1478079
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
2310	11.6	0.0	0.0	chr19	1564251	1564553	(57053063)	+	AluSx	SINE/Alu	1	303	(9)	1799033
2414	9.2	0.0	0.0	chr19	32704266	32704559	(25913057)	C	AluSg	SINE/Alu	(16)	294	1	1855336
693	29.4	4.5	8.8	chr19	32704560	32704630	(25912986)	C	L1MEc	LINE/L1	(4821)	1812	1739	1855328
460	23.9	8.4	0.0	chr19	32704628	32704824	(25912792)	C	L1MEc	LINE/L1	(5444)	1174	960	1855328
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
26	23.7	3.8	3.6	chr19	36272210	36272218	(22345398)	+	(CTGTCT)n	Simple_repeat	67	110	(0)	1862255
259	26.8	2.7	0.0	chr19	45439316	45439386	(13178230)	+	MIR3	SINE/MIR	97	169	(39)	1881319
26	11.9	0.0	6.3	chr19	45439387	45439415	(13178201)	+	(AAT)n	Simple_repeat	1	28	(0)	1881320
827	14.2	0.0	0.8	chr19	45439416	45439542	(13178074)	+	FLAM_C	SINE/Alu	1	126	(17)	1881321
26	11.9	0.0	6.3	chr19	45439543	45439575	(13178041)	+	(AAT)n	Simple_repeat	2	31	(0)	1881322
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
2849	23.4	6.6	2.7	chr2	24954954	24955798	(217237731)	+	L1M4a1	LINE/L1	899	1778	(801)	1947006
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
1395	14.4	16.7	0.7	chr2	43233301	43233586	(198959943)	C	MER58B	DNA/hAT-Charlie	(0)	341	1	1977148
21906	11.1	1.9	1.8	chr2	52013144	52018678	(190174851)	C	L1PB1	LINE/L1	(1021)	5841	254	1990770
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
9476	20.4	8.8	2.2	chr2	110823267	110824503	(131369026)	C	L1MC3	LINE/L1	(1928)	5857	4477	2072762
3320	25.5	5.1	3.0	chr2	110824503	110825521	(131368008)	C	L1MEf	LINE/L1	(5154)	1046	6	2072764
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
619	18.6	0.5	0.0	chr2	161281902	161282139	(80911390)	+	ACRO1	Satellite/acro	1	239	(5)	2144211
1854	18.5	0.3	0.6	chr2	172130678	172130990	(70062539)	C	AluJr	SINE/Alu	(0)	312	1	2159665
4396	22.3	6.1	8.7	chr2	172130991	172131118	(70062411)	C	L1MEf	LINE/L1	(5375)	867	756	2159652
499	30.5	1.2	3.5	chr2	233971318	233971490	(8222039)	+	MER117	DNA/hAT-Charlie	28	196	(1)	2251199
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
29	29.8	2.9	2.1	chr20	30814535	30814670	(33629497)	+	(ACAC)n	Simple_repeat	1	140	(0)	2305474
2131	11.0	0.3	1.0	chr20	62864097	62864397	(1579770)	+	AluSc8	SINE/Alu	1	299	(12)	2369039
1662	24.4	10.9	6.9	chr20	62864398	62864498	(1579669)	+	L1MEc	LINE/L1	1524	1656	(4744)	2369036
1724	17.7	4.7	5.8	chr20	62864499	62864693	(1579474)	+	MER2	DNA/TcMar-Tigger	3	202	(143)	2369040
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
1056	3.1	7.2	0.0	chr21	34527688	34527816	(12182167)	C	MER85	DNA/PiggyBac	(0)	139	1	2406772
16	22.4	1.4	0.0	chr21	34527855	34527893	(12182090)	+	A-rich	Low_complexity	1	39	(0)	2406773
2130	11.9	1.3	0.0	chr21	37579027	37579320	(9130663)	C	AluSc	SINE/Alu	(10)	299	2	2411823
1274	28.2	4.6	5.9	chr21	37579321	37579542	(9130441)	C	L1MEf	LINE/L1	(5480)	1557	1119	2411822
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
530	23.4	6.1	1.9	chr22	11572555	11572711	(39245757)	+	MIRb	SINE/MIR	33	196	(72)	2425189
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
5464	16.4	9.1	3.3	chr22	42056885	42057501	(8760967)	C	L1MB7	LINE/L1	(5669)	1848	1186	2477339
686	27.5	0.0	1.5	chr22	42057508	42057703	(8760765)	C	L1MB7	LINE/L1	(7310)	207	15	2477339
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
3944	25.8	12.1	5.9	chr3	185856165	185857524	(12438035)	+	L1MEf	LINE/L1	48	1558	(4642)	2767233
1201	30.4	9.0	2.6	chr3	197234968	197235950	(1059609)	+	L1MEc	LINE/L1	22	1097	(5318)	2786567
679	23.9	7.5	1.3	chr3	197235944	197236031	(1059528)	+	L1M4a2	LINE/L1	1823	1918	(738)	2786568
1906	17.8	0.3	0.7	chr3	197236032	197236340	(1059219)	+	AluJb	SINE/Alu	1	308	(4)	2786569
3896	7.5	0.8	0.6	chr4	10498903	10499414	(179715141)	+	LTR10D	LTR/ERV1	1	513	(0)	2804544
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
2430	26.2	6.7	2.0	chr4	175743102	175744466	(14470089)	+	L1MEg	LINE/L1	1833	3269	(3050)	3034591
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
2327	25.6	5.4	4.5	chr6	119866331	119867050	(50938929)	+	L1M4a1	LINE/L1	901	1620	(959)	3487125
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
684	26.6	7.8	3.6	chr9	32530586	32530916	(105863801)	C	L1ME2	LINE/L1	(4278)	1964	1619	4053796
454	28.2	11.2	3.0	chr9	32530908	32531276	(105863441)	C	L1ME2	LINE/L1	(5239)	1003	601	4053796
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
4230	28.1	6.7	3.3	chr9	132816598	132818706	(5576011)	+	L1MEf	LINE/L1	38	2292	(4123)	4189548
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
1818	16.4	0.0	0.0	chrX	49345995	49346281	(106694614)	C	AluSx	SINE/Alu	(25)	287	1	4437942
333	21.9	3.0	0.0	chrY	10663511	10663574	(46563841)	C	AluYj4	SINE/Alu	(22)	289	224	4587921
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638