1535	0.0	0.0	0.0	chr1	16514122	16514285	(232442137)	C	U1	snRNA	(1)	164	1	27677
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
1364	10.8	1.6	0.0	chr1	28649101	28649286	(220307136)	C	AluSc	SINE/Alu	(120)	189	1	54783
16725	17.9	2.5	1.9	chr1	29377930	29380337	(219576085)	C	L1MA4	LINE/L1	(3898)	3667	1239	56484
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
329	31.9	5.0	0.0	chr1	50348524	50348636	(198607786)	C	L2b	LINE/L2	(13)	3362	3244	96633
1994	14.6	12.2	0.0	chr1	51089016	51089391	(197867031)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	97918
2629	13.3	4.0	4.8	chr1	51089538	51089987	(197866435)	+	L1M3f	LINE/L1	1944	2400	(4165)	97919
2187	27.8	6.0	3.6	chr1	62210513	62211374	(186745048)	+	HAL1ME	LINE/L1	890	1773	(692)	119747
1217	21.4	10.3	5.7	chr1	63464518	63465363	(185491059)	+	L1MC4	LINE/L1	7116	8037	(5)	122101
1133	21.6	12.5	1.1	chr1	63465421	63465689	(185490733)	C	AluJr	SINE/Alu	(8)	304	1	122102
1506	15.7	0.9	0.0	chr1	66915841	66916056	(182040366)	+	AluSx	SINE/Alu	1	218	(94)	127966
342	6.8	0.0	0.0	chr1	66916059	66916102	(182040320)	+	AluSz6	SINE/Alu	257	300	(12)	127967
15335	10.0	6.7	2.8	chr1	66916103	66918817	(182037605)	+	MER4-int	LTR/ERV1	3154	6598	(0)	127963
7132	18.6	2.9	1.6	chr1	71125349	71127098	(177829324)	C	L1M3f	LINE/L1	(4549)	3016	1239	134436
5678	14.6	2.3	5.3	chr1	76027358	76028449	(172927973)	+	L1M3f	LINE/L1	2	1059	(4269)	140817
260	32.8	6.8	7.3	chr1	82200866	82201056	(166755366)	C	MIRb	SINE/MIR	(0)	268	79	149495
1400	10.8	2.5	0.0	chr1	87389545	87389739	(161566683)	+	AluSp	SINE/Alu	106	305	(8)	156977
956	21.2	8.2	0.7	chr1	87389740	87390019	(161566403)	+	HAL1ME	LINE/L1	1522	1824	(641)	156976
252	21.0	3.1	0.0	chr1	87390043	87390104	(161566318)	+	HAL1	LINE/L1	1816	1879	(628)	156978
2178	13.5	0.0	0.3	chr1	96787025	96787321	(152169101)	C	AluSx	SINE/Alu	(16)	296	1	171163
3683	19.8	4.0	3.9	chr1	106975501	106976266	(141980156)	+	L1M3f	LINE/L1	4	770	(4558)	184760
3125	24.0	7.8	1.1	chr1	106976286	106977409	(141979013)	C	BLACKJACK	DNA/hAT-Blackjack	(551)	2418	1213	184761
23	7.0	0.0	0.0	chr1	116368629	116368658	(132587764)	+	(T)n	Simple_repeat	1	30	(0)	199607
30	4.8	5.7	4.0	chr1	125151026	125151095	(123805327)	+	(GATTCCATTC)n	Simple_repeat	1	74	(0)	207451
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
357	16.4	0.0	0.0	chr1	150187240	150187294	(98769128)	C	FLAM_A	SINE/Alu	(26)	116	62	218477
944	19.1	4.6	1.9	chr1	150187589	150187801	(98768621)	C	MER20	DNA/hAT-Charlie	(0)	219	1	218478
2539	9.9	0.3	1.0	chr1	155536761	155537073	(93419349)	+	AluY	SINE/Alu	1	311	(0)	228227
362	31.2	6.4	5.4	chr1	155537340	155537525	(93418897)	C	MIRb	SINE/MIR	(10)	258	71	228228
2504	15.9	3.7	0.7	chr1	156773685	156774134	(92182288)	+	L1MB4	LINE/L1	5567	6030	(150)	230729
2260	8.2	0.3	3.0	chr1	156774135	156774472	(92181950)	C	AluSg	SINE/Alu	(0)	310	1	230730
1306	14.0	0.0	7.4	chr1	186402405	186402625	(62553797)	C	AluJo	SINE/Alu	(22)	290	86	275540
616	24.0	2.3	0.0	chr1	186402635	186402759	(62553663)	C	AluJo	SINE/Alu	(56)	256	129	275542
568	20.2	11.3	0.8	chr1	186402763	186402881	(62553541)	C	AluJr4	SINE/Alu	(179)	133	1	275543
378	32.5	5.5	0.0	chr1	186402885	186403004	(62553418)	+	MIRb	SINE/MIR	131	257	(11)	275534
288	30.0	8.7	4.7	chr1	188907328	188907670	(60048752)	C	L1MEc	LINE/L1	(6025)	375	18	278902
2145	13.2	0.0	2.4	chr1	200251778	200252072	(48704350)	+	AluSg4	SINE/Alu	7	294	(16)	293862
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
412	21.6	3.0	2.9	chr1	206923601	206924793	(42031629)	+	(GT)n	Simple_repeat	1	1229	(0)	305929
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
1310	27.7	7.2	3.8	chr1	225063493	225064026	(23892396)	+	L1ME2	LINE/L1	1061	1616	(4784)	333530
2902	23.0	4.6	3.4	chr1	225063998	225064918	(23891504)	+	L1ME2	LINE/L1	5384	6329	(8)	333530
6434	26.0	7.3	5.7	chr1	225296360	225299131	(23657291)	C	L1MA5A	LINE/L1	(3958)	3608	731	333759
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
1569	22.6	1.2	5.1	chr1	234079857	234080296	(14876126)	+	MER21C	LTR/ERVL	1	510	(428)	347326
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
3746	20.5	4.3	6.0	chr1	236780016	236781126	(12175296)	+	L1M4	LINE/L1	1936	3104	(3540)	352230
232	24.6	5.5	0.0	chr1	244452561	244452629	(4503793)	C	MIRc	SINE/MIR	(117)	151	79	364210
297	27.6	22.1	2.5	chr1	244452648	244452819	(4503603)	C	MIR	SINE/MIR	(62)	206	3	364211
4754	23.0	2.7	1.1	chr10	26334604	26335915	(107461507)	C	L1M3f	LINE/L1	(4981)	2584	1251	411458
454	32.4	9.8	4.9	chr10	44837630	44837860	(88959562)	+	L1M5	LINE/L1	5149	5389	(757)	435291
339	20.8	3.8	0.0	chr10	44837959	44838035	(88959387)	C	L1MD	LINE/L1	(1576)	4570	4491	435293
2142	11.3	2.9	0.0	chr10	44838527	44838826	(88958596)	C	AluSq	SINE/Alu	(4)	309	1	435294
11	18.5	0.0	7.1	chr10	62045334	62045375	(71752047)	+	A-rich	Low_complexity	1	42	(0)	459470
4675	19.6	5.0	2.2	chr10	83551740	83552726	(50244696)	C	L1MB7	LINE/L1	(4262)	2605	1591	495526
371	27.0	11.5	1.2	chr10	91425923	91426120	(42371302)	+	L1ME3G	LINE/L1	451	657	(267)	507313
26	13.4	0.0	0.0	chr10	91426557	91426597	(42370825)	+	(CA)n	Simple_repeat	1	41	(0)	507314
26919	3.5	0.1	0.5	chr10	91426851	91431931	(42365491)	C	L1PA3	LINE/L1	(1)	6154	1099	507315
227	25.0	0.0	0.0	chr10	125886653	125886700	(7910722)	C	Tigger12c	DNA/TcMar-Tigger	(66)	668	621	564145
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
2372	10.8	0.0	0.0	chr11	10079966	10080270	(125006352)	+	AluSq	SINE/Alu	1	305	(8)	587015
13596	20.8	3.5	2.2	chr11	10080271	10081476	(125005146)	+	L1M2	LINE/L1	2475	3744	(3105)	587014
4459	28.1	9.4	4.3	chr11	17859125	17860655	(117225967)	+	HAL1	LINE/L1	874	2507	(0)	599438
259	1.2	0.0	7.1	chr11	17896545	17896936	(117189686)	+	(GAAGG)n	Simple_repeat	1	392	(0)	599512
201	30.1	2.4	1.2	chr11	17896937	17897020	(117189602)	+	L3	LINE/CR1	3858	3942	(157)	599510
2314	21.4	3.9	0.4	chr11	17897021	17897489	(117189133)	+	MLT1E2	LTR/ERVL-MaLR	142	627	(0)	599513
5892	18.5	3.5	2.6	chr11	28381299	28382555	(106704067)	C	L1MA4	LINE/L1	(4849)	2716	1431	615419
8484	24.1	4.8	2.7	chr11	58471414	58472467	(76614155)	+	L1MB8	LINE/L1	1409	2490	(4377)	655530
2377	7.7	0.0	0.0	chr11	62058841	62059137	(73027485)	+	AluSc5	SINE/Alu	2	298	(11)	661373
383	30.1	12.4	1.7	chr11	62059138	62059264	(73027358)	+	L1ME3B	LINE/L1	6037	6185	(57)	661372
2054	11.0	2.7	3.0	chr11	62059341	62059640	(73026982)	C	AluSz	SINE/Alu	(13)	299	1	661374
2231	9.9	1.0	0.0	chr11	69839799	69840092	(65246530)	+	AluSz	SINE/Alu	1	297	(15)	675814
285	33.6	9.7	1.5	chr11	69840137	69840269	(65246353)	C	MIR	SINE/MIR	(38)	224	80	675815
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
4799	18.5	4.9	1.4	chr11	76022065	76023113	(59063509)	C	L1MB4	LINE/L1	(3280)	3467	2390	687209
2204	9.8	10.7	2.4	chr11	79076289	79076621	(56010001)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	693214
416	28.5	10.2	12.7	chr11	79076783	79076995	(56009627)	C	MIRb	SINE/MIR	(2)	266	60	693215
481	28.9	6.7	2.4	chr11	102666749	102666918	(32419704)	C	MIRb	SINE/MIR	(46)	222	45	728313
1799	11.4	3.5	0.0	chr11	123111185	123111430	(11975192)	C	AluSx	SINE/Alu	(57)	255	1	760866
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
10724	12.3	3.6	3.2	chr12	10085244	10086923	(123188386)	+	L1PBa	LINE/L1	2728	4462	(2400)	794701
834	28.4	13.8	10.0	chr12	13169513	13170460	(120104849)	+	HAL1	LINE/L1	905	1865	(642)	799485
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
7499	13.8	3.1	1.7	chr12	30806991	30807917	(102467392)	+	L1M3f	LINE/L1	1247	2187	(4378)	824226
1978	16.9	0.0	0.0	chr12	30807918	30808218	(102467091)	C	AluSz6	SINE/Alu	(10)	302	2	824227
245	22.1	4.9	6.1	chr12	45794768	45794849	(87480460)	C	MARNA	DNA/TcMar-Mariner	(324)	262	182	841405
1299	21.6	3.8	4.1	chr12	56739539	56739829	(76535480)	C	AluJr	SINE/Alu	(21)	291	2	860157
5138	15.7	5.4	0.7	chr12	82627426	82628336	(50646973)	+	L1M3f	LINE/L1	1247	2203	(4362)	898017
5203	9.4	0.1	0.0	chr12	82628354	82629076	(50646233)	C	L1PA7	LINE/L1	(3)	6151	5428	898018
4776	25.2	5.0	1.8	chr12	88392960	88393988	(44881321)	+	L1PB4	LINE/L1	721	1978	(5171)	905452
5389	8.1	1.1	0.1	chr12	96344836	96345568	(36929741)	C	L1PA10	LINE/L1	(16)	6152	5413	918882
7376	22.1	8.0	3.3	chr12	96345569	96346041	(36929268)	+	L1MB4	LINE/L1	2169	2735	(3909)	918881
1961	13.6	2.4	1.1	chr12	96346042	96346170	(36929139)	+	AluSq	SINE/Alu	1	135	(178)	918883
1294	17.8	1.6	0.0	chr12	104057535	104057781	(29217528)	+	Tigger6b	DNA/TcMar-Tigger	1347	1597	(0)	931781
4135	13.3	3.7	2.1	chr12	104057802	104058513	(29216796)	C	L1M3f	LINE/L1	(4595)	733	10	931782
36	2.7	0.0	0.0	chr12	113080590	113080627	(20194682)	+	(GAATG)n	Simple_repeat	1	38	(0)	950746
12	8.7	0.0	3.6	chr12	113080628	113080649	(20194660)	+	(GAATA)n	Simple_repeat	1	21	(0)	950747
1954	15.0	0.7	0.3	chr12	113080696	113080989	(20194320)	+	AluJo	SINE/Alu	3	297	(15)	950748
1446	31.7	6.8	6.0	chr12	123726646	123727284	(9548025)	C	L1MEd	LINE/L1	(6305)	781	142	974807
2038	8.9	2.5	0.7	chr12	131477203	131477472	(1797837)	+	AluSx1	SINE/Alu	38	312	(0)	988162
79	32.7	3.4	2.3	chr12	131477519	131477899	(1797410)	+	(TGATAA)n	Simple_repeat	1	394	(0)	988163
6735	13.6	4.7	1.7	chr12	131514330	131515555	(1759754)	+	L1M3f	LINE/L1	1253	2516	(5049)	988223
1490	16.0	19.5	5.8	chr12	132992160	132992553	(282756)	C	L1MCa	LINE/L1	(4740)	1768	1280	990300
430	17.5	1.2	1.2	chr12	132992554	132992634	(282675)	C	Tigger5b	DNA/TcMar-Tigger	(1)	471	391	990310
455	21.5	0.0	0.0	chr12	132992625	132992703	(282606)	+	Tigger5b	DNA/TcMar-Tigger	391	469	(3)	990310
7621	19.6	2.0	0.8	chr13	25524948	25527190	(88837138)	C	L1MA4	LINE/L1	(4066)	3499	1238	1001983
8221	13.5	9.9	2.1	chr13	28512466	28512965	(85851363)	C	L1MCa	LINE/L1	(3657)	2664	2121	1006866
22	7.4	0.0	0.0	chr13	28512968	28512996	(85851332)	+	(T)n	Simple_repeat	1	29	(0)	1006868
2172	10.6	9.3	8.8	chr13	47936811	47936967	(66427361)	+	THE1B	LTR/ERVL-MaLR	1	168	(196)	1035971
2270	10.6	0.3	2.3	chr13	47936968	47937270	(66427058)	C	AluSx	SINE/Alu	(6)	306	10	1035972
5343	23.0	11.4	1.7	chr13	51655016	51657233	(62707095)	C	L1M4	LINE/L1	(1811)	4830	2327	1041934
1406	20.7	0.9	0.9	chr13	51657228	51657554	(62706774)	C	L1M4	LINE/L1	(5295)	2222	1896	1041934
1200	25.7	5.7	1.8	chr13	62410556	62410895	(51953433)	+	MLT1A0	LTR/ERVL-MaLR	1	354	(11)	1055970
2084	6.8	10.4	0.0	chr13	64728830	64729095	(49635233)	+	AluY	SINE/Alu	1	297	(14)	1058916
360	33.3	8.2	3.4	chr13	64729117	64729324	(49635004)	+	MIRc	SINE/MIR	50	268	(0)	1058917
9841	21.9	5.9	2.0	chr13	76111970	76117335	(38246993)	+	L1MA4	LINE/L1	1239	6760	(805)	1074315
1067	26.5	7.5	7.3	chr13	88315829	88316227	(26048101)	C	MLT1E2	LTR/ERVL-MaLR	(23)	604	205	1090154
21387	10.0	0.6	0.4	chr14	24016023	24019886	(83023832)	+	L1PA6	LINE/L1	2278	6150	(4)	1133654
420	25.9	2.2	2.9	chr14	24020004	24020142	(83023576)	+	MER102a	DNA/hAT-Charlie	71	208	(122)	1133655
1636	16.7	3.9	3.9	chr14	24223120	24223425	(82820293)	+	AluJr	SINE/Alu	1	306	(6)	1133931
946	16.9	10.7	6.6	chr14	24223426	24223534	(82820184)	C	Charlie5	DNA/hAT-Charlie	(254)	2370	2260	1133929
26	0.0	0.0	0.0	chr14	24223542	24223566	(82820152)	+	(TATT)n	Simple_repeat	1	25	(0)	1133932
1603	16.6	0.0	8.3	chr14	24223567	24223739	(82819979)	C	AluJr	SINE/Alu	(30)	282	129	1133933
2120	10.2	0.3	5.8	chr14	24223740	24223916	(82819802)	C	AluSz	SINE/Alu	(16)	296	136	1133934
2658	21.0	8.4	4.1	chr14	35140157	35140645	(71903073)	C	L1ME2z	LINE/L1	(779)	5665	5192	1149434
463	22.4	1.0	3.0	chr14	35140655	35140755	(71902963)	C	MER5B	DNA/hAT-Charlie	(79)	99	1	1149436
14894	18.6	3.0	3.3	chr14	39570675	39577155	(67466563)	C	L1MA4	LINE/L1	(4)	7715	1240	1155905
2431	17.4	3.9	0.2	chr14	45088995	45089467	(61954251)	C	L1M3	LINE/L1	(889)	5251	4761	1162640
1200	14.5	21.5	0.4	chr14	45089471	45089705	(61954013)	C	AluJb	SINE/Alu	(14)	298	1	1162641
648	31.4	4.2	1.7	chr14	51219615	51219844	(55823874)	+	MIRb	SINE/MIR	33	268	(0)	1171134
16	13.9	0.0	6.7	chr14	51220063	51220107	(55823611)	+	A-rich	Low_complexity	1	45	(0)	1171135
2593	8.1	0.0	0.0	chr14	60104039	60104347	(46939371)	+	AluSg	SINE/Alu	1	309	(1)	1184567
2250	13.1	3.3	2.8	chr14	60104513	60104874	(46938844)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1184568
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
6339	21.0	7.0	3.8	chr15	28063125	28065545	(73925644)	C	L1MB7	LINE/L1	(3710)	3037	340	1273360
2366	10.5	0.0	0.0	chr15	44401826	44402129	(57589060)	C	AluSq2	SINE/Alu	(9)	304	1	1298837
2250	12.3	0.0	0.0	chr15	56061260	56061552	(45929637)	+	AluSx1	SINE/Alu	1	293	(19)	1316652
4756	14.8	3.9	4.1	chr15	56061553	56062398	(45928791)	+	L1MC1	LINE/L1	800	1645	(4863)	1316649
2874	7.4	4.1	0.0	chr15	73154229	73154645	(28836544)	C	L1MA3	LINE/L1	(20)	6285	5851	1346693
7606	24.8	3.6	4.2	chr15	73154645	73157042	(28834147)	C	L1M2	LINE/L1	(3792)	3054	682	1346694
2771	1.0	2.4	0.7	chr15	91278412	91278702	(10712487)	+	AluYb8	SINE/Alu	17	312	(6)	1378032
626	30.7	9.9	2.7	chr15	95029350	95030499	(6960690)	+	L1ME4b	LINE/L1	2	455	(437)	1383842
293	19.4	4.0	0.0	chr16	1025186	1025257	(89313088)	C	MER2	DNA/TcMar-Tigger	(3)	342	268	1395420
720	32.2	5.4	6.0	chr16	14502230	14502599	(75835746)	C	MamRep137	DNA/TcMar-Tigger	(47)	463	96	1422285
1490	20.2	2.4	5.1	chr16	31020202	31020340	(59318005)	+	MLT1A	LTR/ERVL-MaLR	35	162	(212)	1459416
1763	16.3	2.9	1.0	chr16	31020341	31020640	(59317705)	+	AluSz	SINE/Alu	1	306	(6)	1459417
1490	20.2	2.4	5.1	chr16	31020641	31020850	(59317495)	+	MLT1A	LTR/ERVL-MaLR	163	374	(0)	1459416
2295	11.2	0.3	0.6	chr16	31020924	31021234	(59317111)	C	AluSg	SINE/Alu	(0)	310	1	1459418
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
338	14.9	0.0	0.0	chr16	34085515	34085561	(56252784)	C	AluYj4	SINE/Alu	(39)	272	226	1463590
49	10.2	1.2	0.0	chr16	34085562	34085645	(56252700)	+	(CCATT)n	Simple_repeat	1	85	(0)	1463591
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
26	2.1	7.5	3.5	chr16	34699521	34699573	(55638772)	+	(TGATGATTCCAT)n	Simple_repeat	1	57	(0)	1464055
13771	19.9	2.7	4.9	chr16	50417344	50419030	(39919315)	C	L1MB4	LINE/L1	(2993)	3651	1928	1472434
30	10.5	0.0	0.0	chr16	57199878	57199928	(33138417)	+	(T)n	Simple_repeat	1	51	(0)	1484554
6476	8.0	2.5	18.1	chr16	57199929	57201991	(33136354)	C	SVA_D	Retroposon/SVA	(20)	1366	6	1484555
6018	17.0	3.5	2.8	chr16	64051442	64052623	(26285722)	+	L1M3f	LINE/L1	1310	2499	(4066)	1495754
1431	20.4	10.4	0.2	chr16	75347720	75348118	(14990227)	+	L1MD3	LINE/L1	7404	7847	(148)	1516585
897	21.4	1.7	2.3	chr16	75348119	75348291	(14990054)	C	FAM	SINE/Alu	(13)	172	1	1516586
889	10.7	5.1	0.0	chr16	75348294	75348443	(14989902)	+	L1MD3	LINE/L1	7838	7995	(0)	1516587
2480	6.8	0.0	1.3	chr17	7135874	7136182	(76121259)	+	AluSc	SINE/Alu	1	305	(4)	1558304
1684	15.7	6.9	2.0	chr17	7136183	7136283	(76121158)	+	L1MB3	LINE/L1	6060	6175	(8)	1558303
1027	11.9	7.8	0.0	chr17	7136499	7136675	(76120766)	+	Tigger4b	DNA/TcMar-Tigger	1	192	(169)	1558305
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
2904	14.0	6.2	0.0	chr17	27214029	27214499	(56042942)	C	LTR22C0	LTR/ERVK	(0)	502	1	1586294
976	10.5	0.0	0.0	chr17	38923845	38923990	(44333451)	+	FLAM_C	SINE/Alu	1	143	(0)	1608886
321	25.3	1.2	1.2	chr17	38924131	38924210	(44333231)	+	MIRb	SINE/MIR	3	82	(186)	1608887
278	22.9	0.0	0.0	chr17	38996776	38996845	(44260596)	C	L1ME3E	LINE/L1	(4537)	1705	1636	1609055
20	3.5	3.3	0.0	chr17	38996968	38996997	(44260444)	+	(TCC)n	Simple_repeat	1	31	(0)	1609083
1831	29.2	9.2	6.2	chr17	38997000	38997174	(44260267)	C	L1ME3E	LINE/L1	(5548)	1555	1382	1609055
2324	10.9	1.0	0.6	chr17	38997175	38997486	(44259955)	C	AluSq2	SINE/Alu	(0)	313	1	1609084
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
322	17.9	0.0	0.0	chr17	45176236	45176291	(38081150)	C	MIRc	SINE/MIR	(130)	138	83	1621493
1878	6.6	0.0	4.1	chr17	45176530	45176772	(38080669)	C	AluSc5	SINE/Alu	(0)	309	77	1621494
2109	9.8	0.7	3.6	chr17	46202950	46203256	(37054185)	+	AluSx3	SINE/Alu	1	298	(13)	1623568
4046	20.6	2.3	2.3	chr17	61634926	61636167	(21621274)	C	L1MA4	LINE/L1	(4459)	3106	1864	1651367
2595	18.3	2.3	1.3	chr17	61636172	61636720	(21620721)	C	L1M2	LINE/L1	(1188)	4955	4401	1651369
5089	13.6	2.3	2.6	chr17	62300538	62301245	(20956196)	C	L1PA16	LINE/L1	(2)	6164	5469	1652693
7286	15.1	4.2	0.8	chr17	65987576	65988942	(17268499)	+	L1M3f	LINE/L1	1815	3218	(4923)	1659528
984	25.7	8.3	14.8	chr17	73151017	73151441	(10106000)	C	MLT1F	LTR/ERVL-MaLR	(149)	399	1	1671749
1759	24.2	8.6	7.0	chr17	73151443	73151777	(10105664)	+	HAL1	LINE/L1	1678	2031	(476)	1671747
2205	12.3	0.0	0.0	chr17	73151778	73152070	(10105371)	+	AluSz	SINE/Alu	1	293	(19)	1671751
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
17513	14.3	2.8	0.9	chr18	13769325	13771749	(66601536)	+	L1PA15	LINE/L1	4101	6566	(126)	1709474
2451	8.3	0.0	0.3	chr18	21298996	21299297	(59073988)	+	AluSx1	SINE/Alu	1	301	(11)	1712315
21	3.0	5.9	0.0	chr18	21299518	21299551	(59073734)	+	(TTTC)n	Simple_repeat	1	36	(0)	1712316
1981	13.9	11.5	1.6	chr18	33560623	33561014	(46812271)	C	MER61C	LTR/ERV1	(0)	428	4	1730886
24321	11.6	2.6	1.4	chr18	33561024	33561050	(46812235)	C	MER61-int	LTR/ERV1	(11)	5206	5159	1730886
94	0.0	0.0	0.0	chr18	33561051	33561132	(46812153)	+	(ATAAGG)n	Simple_repeat	1	82	(0)	1730887
24321	11.6	2.6	1.4	chr18	33561133	33563962	(46809323)	C	MER61-int	LTR/ERV1	(59)	5158	2307	1730886
577	25.6	7.3	9.8	chr18	51481177	51481268	(28892017)	C	MIRb	SINE/MIR	(0)	268	192	1757048
2483	7.1	0.0	0.3	chr18	51481269	51481587	(28891698)	C	AluY	SINE/Alu	(0)	311	1	1757049
2497	8.3	0.0	0.0	chr18	52515326	52515626	(27857659)	+	AluYk3	SINE/Alu	1	301	(10)	1758556
2626	19.8	4.3	2.8	chr18	52515627	52516412	(27856873)	+	L1MD1	LINE/L1	5008	5828	(414)	1758555
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
223	35.3	9.4	2.1	chr18	76348868	76349055	(4024230)	+	L2a	LINE/L2	3207	3409	(17)	1792065
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
2127	13.1	0.3	3.4	chr19	15106366	15106686	(43510930)	C	AluSx1	SINE/Alu	(0)	312	2	1831134
2809	14.9	4.0	16.5	chr19	15106687	15106819	(43510797)	C	MER4A1_	LTR/ERV1	(469)	131	3	1831131
436	19.8	3.8	4.7	chr19	15106820	15106887	(43510729)	+	MLT1G3	LTR/ERVL-MaLR	527	593	(2)	1831130
412	31.9	10.3	0.0	chr19	17297116	17297281	(41320335)	+	MIRb	SINE/MIR	23	207	(61)	1835964
2240	13.4	0.0	0.0	chr19	17297287	17297592	(41320024)	C	AluSg4	SINE/Alu	(3)	307	2	1835965
18	24.0	0.0	0.0	chr19	17297728	17297762	(41319854)	+	(TTTT)n	Simple_repeat	1	35	(0)	1835966
829	18.1	0.8	0.8	chr19	17297763	17297895	(41319721)	C	AluJo	SINE/Alu	(179)	133	1	1835967
2172	8.7	0.4	0.4	chr19	36217626	36217902	(22399714)	+	AluSp	SINE/Alu	24	300	(13)	1862152
983	7.6	0.0	0.0	chr19	36217974	36218092	(22399524)	C	AluSx	SINE/Alu	(181)	131	13	1862153
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
1945	13.8	4.1	0.7	chr19	36541544	36541826	(22075790)	+	AluSx1	SINE/Alu	2	294	(18)	1862763
2232	20.4	5.9	5.2	chr19	36541827	36542083	(22075533)	+	L1M4	LINE/L1	2176	2455	(5062)	1862762
2340	11.3	2.3	0.0	chr19	36542084	36542385	(22075231)	+	AluSp	SINE/Alu	1	309	(4)	1862764
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
6534	18.1	5.9	1.1	chr2	17469937	17471655	(224721874)	C	L1M3f	LINE/L1	(4553)	3012	1239	1936010
426	28.8	7.8	7.2	chr2	28354391	28354565	(213838964)	+	L1MC5a	LINE/L1	2493	2662	(115)	1953409
2135	15.1	0.0	0.0	chr2	28354566	28354870	(213838659)	+	AluJr	SINE/Alu	1	305	(7)	1953413
426	28.8	7.8	7.2	chr2	28354871	28354956	(213838573)	+	L1MC5a	LINE/L1	2663	2754	(23)	1953409
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
3348	21.7	7.8	2.2	chr2	39837449	39838429	(202355100)	C	L1PA15-16	LINE/L1	(4729)	2124	1263	1971798
693	22.0	5.8	0.0	chr2	41853541	41853717	(200339812)	C	MER5A	DNA/hAT-Charlie	(0)	189	2	1974530
452	29.7	6.0	4.6	chr2	41853990	41854242	(200339287)	C	MIRc	SINE/MIR	(4)	264	4	1974531
7087	14.2	4.2	2.3	chr2	74730253	74731258	(167462271)	C	L1MA4	LINE/L1	(4267)	2298	1261	2025857
2217	11.3	2.7	0.0	chr2	75860917	75861207	(166332322)	C	AluSx	SINE/Alu	(13)	299	1	2027621
5625	22.7	5.2	1.5	chr2	76048760	76050263	(166143266)	C	L1M3f	LINE/L1	(3984)	3581	2016	2027855
27	0.0	0.0	0.0	chr2	76050264	76050289	(166143240)	+	(T)n	Simple_repeat	1	26	(0)	2027857
5625	17.2	3.9	1.0	chr2	76050290	76050726	(166142803)	C	L1M3f	LINE/L1	(4550)	2015	1568	2027855
991	29.3	8.2	2.5	chr2	84765399	84766541	(157426988)	+	L1MEi	LINE/L1	1727	3008	(3138)	2039412
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
8480	9.0	0.6	3.6	chr2	97428244	97429026	(144764503)	C	L1PA10	LINE/L1	(1251)	5080	4337	2053721
7292	9.8	1.7	0.5	chr2	97429026	97430970	(144762559)	C	L1PA10	LINE/L1	(2962)	3369	1402	2053721
9670	22.7	4.9	1.9	chr2	111209519	111211236	(130982293)	C	L1ME1	LINE/L1	(0)	6570	4806	2073232
1894	16.6	0.0	0.7	chr2	111211237	111211537	(130981992)	C	AluSz6	SINE/Alu	(13)	299	1	2073233
9670	25.1	4.1	2.3	chr2	111211538	111211654	(130981875)	C	L1ME1	LINE/L1	(1732)	4805	4681	2073232
12948	21.7	5.7	3.0	chr2	116296192	116300629	(125892900)	+	L1MA4	LINE/L1	1243	5856	(1706)	2080890
182	25.0	3.7	0.0	chr2	119679438	119679489	(122514040)	+	MIRc	SINE/MIR	91	144	(124)	2085746
611	20.2	10.6	0.6	chr2	119679654	119679832	(122513697)	+	L1MC5	LINE/L1	9091	9289	(15)	2085747
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
328	24.2	0.0	0.0	chr2	161279238	161279303	(80914226)	C	MER47C	DNA/TcMar-Tigger	(31)	66	1	2144205
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
343	26.4	8.3	0.8	chr2	197712205	197712326	(44481203)	+	L1MEi	LINE/L1	1919	2050	(5053)	2194515
421	26.2	9.2	2.9	chr2	197712327	197712777	(44480752)	+	L1MEi	LINE/L1	1983	2530	(3616)	2194515
545	29.8	7.5	2.7	chr2	212862567	212863008	(29330521)	C	L1M2	LINE/L1	(517)	5725	5261	2217518
4953	17.1	1.9	1.6	chr2	212863045	212863994	(29329535)	C	L1M3f	LINE/L1	(4370)	958	6	2217519
1989	8.4	0.4	3.6	chr2	218727493	218727766	(23465763)	+	AluY	SINE/Alu	38	302	(9)	2226715
6833	14.7	4.6	3.9	chr2	218727767	218728086	(23465443)	C	L1M3f	LINE/L1	(4375)	2190	1874	2226709
3209	12.4	4.9	2.3	chr2	218728087	218728598	(23464931)	C	MER1A	DNA/hAT-Charlie	(0)	529	4	2226716
1738	18.4	1.1	0.0	chr2	223815836	223816117	(18377412)	+	AluJb	SINE/Alu	9	293	(19)	2234909
1058	17.1	0.0	11.6	chr2	223816118	223816219	(18377310)	C	MER6C	DNA/TcMar-Tigger	(114)	88	1	2234908
216	21.6	11.0	4.9	chr2	223816566	223816667	(18376862)	C	MIRb	SINE/MIR	(157)	111	3	2234910
323	24.2	3.2	0.0	chr2	231831755	231831843	(10361686)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247712
351	23.2	2.0	2.0	chr2	231831871	231831971	(10361558)	+	MER20	DNA/hAT-Charlie	119	219	(0)	2247712
328	25.0	2.1	0.0	chr2	231831972	231832061	(10361468)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247712
364	22.7	1.1	0.0	chr2	231832103	231832190	(10361339)	+	MER20	DNA/hAT-Charlie	131	219	(0)	2247713
310	24.2	3.2	0.0	chr2	231832191	231832279	(10361250)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
268	25.3	2.2	0.0	chr2	231832282	231832368	(10361161)	+	MER20	DNA/hAT-Charlie	131	219	(0)	2247713
339	22.0	3.2	0.0	chr2	231832369	231832457	(10361072)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
326	23.1	3.2	0.0	chr2	231832458	231832546	(10360983)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
2379	10.5	0.0	0.0	chr20	20130009	20130304	(44313863)	+	AluSx3	SINE/Alu	2	297	(14)	2295237
7237	13.5	1.4	4.5	chr20	20130305	20131293	(44312874)	C	L1MA4	LINE/L1	(4345)	2220	1239	2295224
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
5631	14.8	3.0	7.2	chr20	29880107	29881265	(34562902)	+	Tigger1	DNA/TcMar-Tigger	1310	2418	(0)	2304624
386	18.8	0.0	0.0	chr20	29881277	29881340	(34562827)	+	Tigger1	DNA/TcMar-Tigger	2355	2418	(0)	2304625
339	19.1	1.6	0.0	chr20	29881352	29881414	(34562753)	+	Tigger1	DNA/TcMar-Tigger	2355	2418	(0)	2304625
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
5267	15.9	0.7	1.0	chr20	43408824	43409687	(21034480)	+	L1M3f	LINE/L1	3	863	(4465)	2331092
785	18.5	7.5	1.3	chr20	43409690	43409840	(21034327)	+	AluJo	SINE/Alu	137	297	(15)	2331093
9609	16.4	2.9	1.8	chr20	43409867	43411511	(21032656)	+	L1P4	LINE/L1	3511	5193	(953)	2331094
2260	11.4	0.0	1.9	chr20	54092650	54092965	(10351202)	+	AluSx1	SINE/Alu	1	310	(2)	2355028
1884	20.7	6.4	1.4	chr20	54092966	54093460	(10350707)	C	L1M4	LINE/L1	(4855)	2662	2139	2355027
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
797	22.4	0.5	0.1	chr21	8228115	8229742	(38480241)	+	(TCTC)n	Simple_repeat	1	1633	(0)	2373325
797	22.4	0.5	0.1	chr21	8229975	8230765	(38479218)	+	(TCTC)n	Simple_repeat	2	795	(0)	2373327
446	20.9	0.1	6.5	chr21	8230776	8230919	(38479064)	+	MER39B	LTR/ERV1	298	454	(253)	2373328
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
785	22.6	0.5	0.1	chr21	8455261	8456884	(38253099)	+	(TCTC)n	Simple_repeat	1	1629	(0)	2373669
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
3760	11.8	0.7	1.1	chr21	8762115	8762677	(37947306)	C	LTR6A	LTR/ERV1	(0)	564	4	2373947
800	10.7	0.6	0.5	chr21	9096388	9100565	(37609418)	+	CER	Satellite	1	4180	(0)	2374227
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
1683	29.2	6.3	6.8	chr21	9810881	9812152	(36897831)	C	SST1	Satellite/centr	(14)	1549	284	2374881
19	33.9	0.0	1.2	chr21	9812172	9812228	(36897755)	+	(GACA)n	Simple_repeat	1	86	(0)	2374882
18	10.4	0.0	0.0	chr21	9812229	9812259	(36897724)	+	(ACACAC)n	Simple_repeat	1	31	(0)	2374883
1892	29.2	5.1	6.4	chr21	9812264	9813560	(36896423)	C	SST1	Satellite/centr	(1)	1562	284	2374884
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
18	8.7	0.0	0.0	chr21	16420333	16420357	(30289626)	+	(T)n	Simple_repeat	1	25	(0)	2380416
15525	19.4	2.1	3.0	chr21	16938024	16943546	(29766437)	C	L1MA4	LINE/L1	(814)	6748	1240	2381033
227	20.8	11.7	0.0	chr21	17455712	17455764	(29254219)	+	CR1-L3A_Croc	LINE/CR1	3749	3808	(480)	2381631
21	11.7	4.2	2.0	chr21	26572633	26572680	(20137303)	+	A-rich	Low_complexity	1	50	(0)	2394204
7690	12.7	2.7	0.9	chr21	43619370	43620416	(3089567)	+	L1M3f	LINE/L1	1243	2302	(4263)	2420517
3076	15.8	1.1	0.9	chr22	10721335	10730387	(40088081)	+	(TCCATTCCAT)n	Simple_repeat	1	9151	(0)	2424547
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
530	23.4	6.1	1.9	chr22	11572555	11572711	(39245757)	+	MIRb	SINE/MIR	33	196	(72)	2425189
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1249	21.0	6.5	1.2	chr22	11896731	11897053	(38921415)	C	L1MB8	LINE/L1	(5)	6173	5833	2425507
2301	14.0	7.0	0.5	chr22	11897054	11897465	(38921003)	C	MER61C	LTR/ERV1	(0)	428	4	2425508
3058	20.8	2.7	1.3	chr22	11900876	11902001	(38916467)	C	L1MA5	LINE/L1	(354)	5946	4805	2425510
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
1153	11.0	0.7	0.0	chr22	20338381	20338535	(30479933)	+	AluYm1	SINE/Alu	13	168	(143)	2433146
51	2.3	11.4	0.0	chr22	20338573	20338660	(30479808)	+	(AT)n	Simple_repeat	1	98	(0)	2433147
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
6919	13.5	3.7	0.3	chr22	49766981	49768136	(1050332)	C	L1M3f	LINE/L1	(4132)	1196	1	2489732
6854	19.8	3.1	1.3	chr3	38662393	38663850	(159631709)	+	L1MA4	LINE/L1	1502	2993	(4572)	2553355
1267	29.6	6.5	5.1	chr3	55133331	55133748	(143161811)	+	L1MC5a	LINE/L1	2328	2777	(0)	2580001
215	23.0	1.9	0.0	chr3	56557717	56557774	(141737785)	+	L2a	LINE/L2	3328	3425	(1)	2582353
238	30.1	4.0	0.0	chr3	56557874	56557946	(141737613)	C	L2c	LINE/L2	(33)	3354	3279	2582354
497	32.7	11.0	6.6	chr3	56705181	56705756	(141589803)	+	L1MEc	LINE/L1	92	712	(5688)	2582585
13748	24.0	6.7	2.6	chr3	95326835	95330905	(102964654)	C	L1PB3	LINE/L1	(3519)	3396	56	2635337
2144	11.5	5.8	0.0	chr3	105002127	105002421	(93293138)	+	AluSp	SINE/Alu	1	313	(0)	2647678
4602	16.7	1.6	5.7	chr3	105002422	105002636	(93292923)	+	L1PA17	LINE/L1	5979	6161	(5)	2647677
17	12.5	0.0	0.0	chr3	105002666	105002691	(93292868)	+	(AT)n	Simple_repeat	1	26	(0)	2647679
6757	19.6	3.9	2.3	chr3	109081753	109083480	(89212079)	+	L1MA4	LINE/L1	1422	3199	(4366)	2653221
2373	11.6	0.3	0.0	chr3	113974318	113974618	(84320941)	C	AluSx	SINE/Alu	(10)	302	1	2660059
4178	11.6	4.0	1.6	chr3	113974619	113974847	(84320712)	C	L1MA4	LINE/L1	(4472)	2093	1869	2660054
19	18.9	0.0	0.0	chr3	113974848	113974883	(84320676)	+	(CT)n	Simple_repeat	1	36	(0)	2660060
15	14.7	0.0	7.0	chr3	113974884	113974890	(84320669)	+	(CTTTCT)n	Simple_repeat	1	43	(0)	2660061
2577	8.4	0.0	0.0	chr3	136665794	136666104	(61629455)	+	AluYf1	SINE/Alu	1	311	(0)	2694808
1159	22.9	3.5	3.5	chr3	136666114	136666429	(61629130)	+	MLT1E2	LTR/ERVL-MaLR	303	618	(9)	2694806
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
4116	16.4	4.1	2.8	chr3	196794252	196795012	(1500547)	+	L1M3f	LINE/L1	3	774	(4554)	2785776
1319	30.1	2.6	3.6	chr3	196795035	196795173	(1500386)	+	L1MEf	LINE/L1	1365	1507	(4908)	2785777
1989	15.3	0.6	4.0	chr3	196795174	196795494	(1500065)	+	AluJb	SINE/Alu	1	310	(2)	2785778
1817	18.6	0.7	0.3	chr4	1485040	1485334	(188729221)	C	AluJr	SINE/Alu	(16)	296	1	2790240
2171	20.9	12.9	5.4	chr4	1485335	1485706	(188728849)	C	L1MEc	LINE/L1	(4735)	1665	1250	2790237
1831	16.8	4.9	0.3	chr4	1485707	1486035	(188728520)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	2790241
7064	15.1	4.1	1.3	chr4	2185922	2187230	(188027325)	+	L1MA4	LINE/L1	1251	2600	(4965)	2791215
312	28.0	6.9	3.3	chr4	13656142	13656322	(176558233)	+	L1ME4b	LINE/L1	538	725	(167)	2809660
16	0.0	0.0	0.0	chr4	13656618	13656634	(176557921)	+	(T)n	Simple_repeat	1	17	(0)	2809661
16933	15.1	1.7	1.5	chr4	14787126	14792230	(175422325)	+	L1PA15-16	LINE/L1	714	5668	(1181)	2811554
7275	19.8	5.4	4.7	chr4	19430820	19432695	(170781860)	+	L1MCa	LINE/L1	1	1889	(4619)	2819472
782	27.3	13.2	3.7	chr4	39621426	39621682	(150592873)	+	L1ME4a	LINE/L1	5528	5821	(303)	2850031
1769	16.7	4.2	0.7	chr4	39621683	39621981	(150592574)	C	AluJb	SINE/Alu	(2)	310	1	2850032
782	27.3	13.2	3.7	chr4	39621982	39622073	(150592482)	+	L1ME4a	LINE/L1	5822	5919	(205)	2850031
2572	6.2	0.3	0.0	chr4	39622074	39622381	(150592174)	C	AluY	SINE/Alu	(2)	309	1	2850033
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
47	0.0	0.0	0.0	chr4	49321339	49321381	(140893174)	+	(TCTG)n	Simple_repeat	1	43	(0)	2865127
43	9.0	0.0	0.0	chr4	49321431	49321489	(140893066)	+	(CA)n	Simple_repeat	1	59	(0)	2865128
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
1130	13.8	0.3	0.1	chr4	49514156	49515857	(140698698)	+	ACRO1	Satellite/acro	1	1705	(0)	2865184
639	7.7	0.0	0.6	chr4	49577855	49577952	(140636603)	C	HSAT5	Satellite	(3)	97	1	2865284
421	36.5	2.5	5.1	chr4	69317665	69317999	(120896556)	+	L1M3c	LINE/L1	258	583	(5548)	2889270
1228	26.9	4.3	5.2	chr4	69318190	69318358	(120896197)	+	L1M3c	LINE/L1	899	1056	(5085)	2889270
46	0.0	0.0	0.0	chr4	69318359	69318397	(120896158)	+	(AC)n	Simple_repeat	1	39	(0)	2889271
1228	26.9	4.3	5.2	chr4	69318398	69318842	(120895713)	+	L1M3c	LINE/L1	1057	1507	(4634)	2889270
5412	14.5	1.9	0.5	chr4	80497744	80499261	(109715294)	+	L1PA15	LINE/L1	4626	6165	(0)	2904895
248	30.1	3.9	1.7	chr4	80499456	80499631	(109714924)	C	L1M5	LINE/L1	(3783)	2432	2253	2904896
6317	19.2	2.1	2.7	chr4	89346721	89348514	(100866041)	C	L1M3f	LINE/L1	(4360)	3205	1418	2918521
1705	17.5	0.0	7.1	chr4	91367013	91367338	(98847217)	+	AluJb	SINE/Alu	2	304	(8)	2921082
16	19.1	0.0	0.0	chr4	91367419	91367448	(98847107)	+	(T)n	Simple_repeat	1	30	(0)	2921083
4262	23.6	6.2	3.6	chr4	94142113	94144313	(96070242)	+	L1M2	LINE/L1	2692	4978	(2587)	2924549
378	31.2	5.9	0.0	chr4	101475248	101475391	(88739164)	C	HAL1	LINE/L1	(1932)	575	423	2934420
13834	17.6	2.4	2.7	chr4	102937746	102941516	(87273039)	+	L1PA15	LINE/L1	2479	6135	(650)	2936387
117	22.4	1.1	2.1	chr4	106858857	106859104	(83355451)	+	GA-rich	Low_complexity	1	274	(12)	2941333
12	4.7	0.0	7.7	chr4	106859105	106859130	(83355425)	+	(AGAA)n	Simple_repeat	1	26	(0)	2941334
377	31.9	10.6	5.4	chr4	106859159	106859566	(83354989)	+	L1MCc	LINE/L1	24	455	(5968)	2941335
329	30.5	4.8	4.1	chr4	113394968	113395090	(76819465)	+	MIR3	SINE/MIR	79	202	(6)	2950754
14999	19.0	4.4	2.8	chr4	114776749	114780997	(75433558)	C	L1MA4	LINE/L1	(1977)	5585	1242	2952484
948	21.8	12.0	6.3	chr4	115495809	115496441	(74718114)	+	L1ME1	LINE/L1	2282	2954	(3793)	2953326
13	9.6	0.0	0.0	chr4	155809910	155809932	(34404623)	+	(TTTC)n	Simple_repeat	1	23	(0)	3007951
13	18.7	0.0	5.0	chr4	157897165	157897204	(32317351)	+	A-rich	Low_complexity	1	40	(0)	3010675
591	30.4	8.1	5.4	chr4	157997395	157997728	(32216827)	C	L2	LINE/L2	(1119)	2300	1957	3010795
819	28.7	7.5	5.4	chr4	158302968	158303630	(31910925)	C	L1MEi	LINE/L1	(670)	1542	865	3011198
4785	21.5	5.0	1.9	chr4	162696886	162699184	(27515371)	C	L1MA5	LINE/L1	(2724)	4835	2412	3017067
9503	20.7	5.3	6.1	chr4	174290154	174291782	(15922773)	C	L1MA10	LINE/L1	(3098)	3744	2123	3032749
2011	15.9	1.3	0.3	chr4	174291783	174292090	(15922465)	C	AluJb	SINE/Alu	(0)	312	2	3032751
3150	26.3	12.2	2.2	chr4	184926355	184927866	(5286689)	C	L1M4a2	LINE/L1	(20)	2809	672	3047392
4709	19.0	0.7	0.9	chr4	189061737	189062576	(1151979)	+	L1M3f	LINE/L1	1245	2082	(4483)	3053432
3874	21.4	3.7	5.3	chr4	189062572	189063911	(1150644)	+	L1M3f	LINE/L1	2302	3659	(3903)	3053432
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
1085	16.4	2.3	0.5	chr5	36593078	36593291	(144944968)	C	Charlie4a	DNA/hAT-Charlie	(270)	238	21	3103061
492	21.1	4.5	5.5	chr5	36593635	36593815	(144944444)	+	MamRep1151	LTR?	3	181	(528)	3103062
1522	27.3	8.1	3.9	chr5	55144438	55145135	(126393124)	+	LTR83	LTR/ERVL	49	778	(2)	3122763
7056	17.7	3.2	1.3	chr5	75520696	75522471	(106015788)	C	L1M3f	LINE/L1	(4506)	3059	1247	3153657
2212	21.4	9.5	4.2	chr5	75778804	75779867	(105758392)	C	Arthur1	DNA/hAT-Tip100	(0)	3947	3306	3154065
275	23.2	9.2	0.0	chr5	75779903	75779971	(105758288)	C	LTR16A	LTR/ERVL	(5)	446	371	3154066
925	14.5	6.6	9.9	chr5	75780037	75780261	(105757998)	C	L1MA8	LINE/L1	(15)	6276	6058	3154067
2222	10.7	0.0	0.0	chr5	75780262	75780584	(105757675)	C	AluSg4	SINE/Alu	(0)	310	1	3154068
10473	17.7	3.0	1.0	chr5	79381909	79383386	(102154873)	+	L1MA4A	LINE/L1	2555	4079	(3483)	3159646
3765	13.3	1.9	6.8	chr5	86876844	86877522	(94660737)	+	LTR9D	LTR/ERV1	1	645	(0)	3170352
7141	18.6	1.7	1.8	chr5	98349235	98350829	(83187430)	+	L1MA4	LINE/L1	1243	2858	(4707)	3185028
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
7533	18.4	1.6	1.4	chr5	113858709	113859593	(67678666)	C	L1M3f	LINE/L1	(4743)	2822	1931	3204839
2262	12.9	0.0	0.3	chr5	113859594	113859904	(67678355)	C	AluSx1	SINE/Alu	(0)	312	3	3204847
272	41.1	4.3	1.1	chr5	117933206	117933387	(63604872)	+	L2	LINE/L2	2215	2402	(1017)	3210247
1536	21.5	5.6	4.8	chr5	126644855	126645068	(54893191)	+	MLT1A	LTR/ERVL-MaLR	163	374	(0)	3221618
7064	16.7	3.2	5.5	chr5	126645069	126645919	(54892340)	C	L1M4b	LINE/L1	(4486)	2381	1542	3221609
4789	19.4	5.6	1.0	chr5	134982070	134983320	(46554939)	+	L1PB3	LINE/L1	1476	2787	(4833)	3233721
23	0.0	0.0	0.0	chr5	143701331	143701355	(37836904)	+	(A)n	Simple_repeat	1	25	(0)	3248110
607	21.8	11.0	1.9	chr5	168642417	168642622	(12895637)	C	L1MEf	LINE/L1	(4769)	1431	1205	3290478
16	15.9	0.0	0.0	chr5	168642623	168642650	(12895609)	+	(T)n	Simple_repeat	1	28	(0)	3290479
6722	5.2	1.6	8.1	chr5	168642651	168644432	(12893827)	C	SVA_F	Retroposon/SVA	(0)	1375	32	3290480
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
2067	26.2	7.1	3.5	chr6	2721740	2722512	(168083467)	+	HAL1	LINE/L1	1405	2229	(278)	3317826
915	16.2	2.0	2.0	chr6	27280802	27281002	(143524977)	+	L1M2	LINE/L1	3382	3582	(2561)	3356639
846	14.8	9.7	1.0	chr6	27280994	27281143	(143524836)	+	L1M2	LINE/L1	5559	5724	(576)	3356639
1623	15.2	8.5	3.5	chr6	27281144	27281433	(143524546)	C	AluSz6	SINE/Alu	(6)	306	1	3356640
846	14.8	9.7	1.0	chr6	27281434	27281480	(143524499)	+	L1M2	LINE/L1	5725	5775	(525)	3356639
244	33.8	8.2	0.6	chr6	36616873	36617030	(134188949)	C	MIR3	SINE/MIR	(20)	188	18	3372922
7402	15.5	3.5	0.4	chr6	38719866	38721103	(132084876)	+	L1M3f	LINE/L1	1824	3507	(4648)	3376860
409	3.2	0.0	12.9	chr6	42876823	42876884	(127929095)	C	AluJo	SINE/Alu	(14)	298	245	3384256
1500	12.6	0.0	0.0	chr6	42876886	42877083	(127928896)	C	AluSx	SINE/Alu	(114)	198	1	3384257
286	23.4	0.0	8.3	chr6	55527506	55527589	(115278390)	C	Arthur1C	DNA/hAT-Tip100	(0)	363	287	3403042
393	30.7	12.9	0.0	chr6	55527860	55528035	(115277944)	C	L3	LINE/CR1	(1182)	2917	2716	3403040
5304	21.1	3.9	2.9	chr6	67066036	67066773	(103739206)	C	L1MA4	LINE/L1	(5036)	2529	1767	3415052
2181	10.0	0.0	2.8	chr6	67066774	67067091	(103738888)	C	AluSq2	SINE/Alu	(0)	313	1	3415063
6115	20.4	3.4	1.8	chr6	76922045	76923510	(93882469)	+	L1M3f	LINE/L1	1244	2724	(4841)	3428235
483	23.1	0.0	4.1	chr6	79102366	79102487	(91703492)	C	L1MB2	LINE/L1	(1226)	4914	4798	3430804
16	0.0	0.0	0.0	chr6	87066576	87066592	(83739387)	+	(T)n	Simple_repeat	1	17	(0)	3440998
1875	18.8	1.0	0.0	chr6	109044033	109044341	(61761638)	+	AluJo	SINE/Alu	1	312	(0)	3471547
11685	17.5	4.8	4.1	chr6	109044342	109044577	(61761402)	+	L1MD	LINE/L1	4870	5074	(1072)	3471546
568	35.3	10.9	4.9	chr6	109044612	109044742	(61761237)	+	L2c	LINE/L2	2339	2465	(954)	3471548
2992	19.4	2.1	1.6	chr6	111427416	111427977	(59378002)	+	L1M3f	LINE/L1	1	565	(4763)	3475577
2577	12.1	1.5	3.2	chr6	111427985	111428455	(59377524)	+	L1M3f	LINE/L1	675	1137	(4191)	3475577
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
1700	17.9	5.2	0.3	chr6	125858359	125858648	(44947331)	+	AluJr	SINE/Alu	1	305	(7)	3494931
3691	15.8	6.9	2.0	chr6	130759581	130760285	(40045694)	+	L1M3f	LINE/L1	1	742	(4586)	3501364
3052	16.4	2.4	0.3	chr6	130760289	130760871	(40045108)	+	L1MA4	LINE/L1	5687	6281	(19)	3501365
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
45	0.0	0.0	0.0	chr6	144141654	144141694	(26664285)	+	(TTG)n	Simple_repeat	1	41	(0)	3520924
1824	17.1	0.0	1.1	chr6	144141695	144141981	(26663998)	C	AluJo	SINE/Alu	(28)	284	1	3520925
831	32.0	10.6	3.0	chr6	153471465	153472506	(17333473)	C	L1MEc	LINE/L1	(5169)	1246	43	3534970
182	24.7	1.3	0.0	chr6	170452770	170453217	(352762)	+	(GT)n	Simple_repeat	1	454	(0)	3557445
107	26.7	1.3	1.3	chr7	240243	240545	(159105428)	+	(ATG)n	Simple_repeat	1	307	(0)	3558095
38	0.0	0.0	0.0	chr7	4083525	4083559	(155262414)	+	(CCTC)n	Simple_repeat	1	35	(0)	3564226
112	24.9	0.7	1.7	chr7	4083573	4083862	(155262111)	+	(CCTC)n	Simple_repeat	1	292	(0)	3564226
7206	18.5	1.6	1.6	chr7	43353423	43355709	(115990264)	+	L1MA4	LINE/L1	1240	3514	(4051)	3622509
2305	9.0	0.0	2.0	chr7	55461416	55461715	(103884258)	C	AluSg	SINE/Alu	(16)	294	1	3638681
16246	18.7	6.6	8.8	chr7	55461716	55462655	(103883318)	C	L1MA4A	LINE/L1	(3953)	3256	2316	3638678
2374	8.2	0.7	0.7	chr7	55640807	55641100	(103704873)	+	AluSq2	SINE/Alu	1	294	(19)	3638924
4951	20.7	4.3	3.2	chr7	55641101	55642033	(103703940)	C	L1M3f	LINE/L1	(4367)	2198	1251	3638921
18	15.5	0.0	0.0	chr7	55733010	55733039	(103612934)	+	A-rich	Low_complexity	1	30	(0)	3639078
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
84	11.5	0.0	0.0	chr7	65489745	65489886	(93856087)	+	(CCATT)n	Simple_repeat	1	142	(0)	3647902
5831	17.6	7.7	4.1	chr7	67211459	67212862	(92133111)	C	L1MC3	LINE/L1	(1022)	6763	5304	3651738
318	22.3	3.4	9.0	chr7	70495526	70497356	(88848617)	+	(CGCACA)n	Simple_repeat	1	1893	(0)	3658384
6399	22.6	10.3	11.5	chr7	72601172	72602579	(86743394)	+	L1MD3	LINE/L1	5307	6823	(1172)	3662681
2321	11.5	0.3	0.6	chr7	99947189	99947501	(59398472)	+	AluSp	SINE/Alu	2	313	(0)	3705544
18	16.5	3.6	2.9	chr7	124477617	124477669	(34868304)	+	A-rich	Low_complexity	1	53	(0)	3741892
1274	7.8	28.9	2.8	chr7	139322619	139322836	(20023137)	C	AluSc5	SINE/Alu	(10)	299	2	3765330
415	22.2	4.4	0.9	chr7	151671591	151671699	(7674274)	+	MLT1C	LTR/ERVL-MaLR	1	113	(354)	3783874
387	10.2	7.8	0.0	chr7	151672023	151672081	(7673892)	C	AluSp	SINE/Alu	(14)	299	236	3783875
243	5.9	0.0	0.0	chr7	151672064	151672097	(7673876)	C	Alu	SINE/Alu	(99)	34	1	3783876
2242	7.8	2.1	0.0	chr7	151672111	151672394	(7673579)	C	AluSc8	SINE/Alu	(21)	290	1	3783877
2221	7.9	0.3	1.4	chr7	152469899	152470188	(6875785)	+	AluSp	SINE/Alu	27	313	(0)	3785199
11471	10.2	1.6	1.3	chr7	152470216	152470656	(6875317)	+	THE1A-int	LTR/ERVL-MaLR	1	443	(1137)	3785198
15988	19.9	2.2	2.5	chr7	158228488	158230984	(1114989)	+	L1M3f	LINE/L1	1238	3716	(3846)	3793097
5514	20.3	7.6	1.6	chr7	158353512	158355221	(990752)	+	L1M3f	LINE/L1	1238	3035	(4530)	3793179
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
1813	27.0	6.8	5.6	chr8	8435308	8436016	(136702620)	C	L1MEd	LINE/L1	(5134)	1952	1219	3804714
31	0.0	0.0	0.0	chr8	8436017	8436045	(136702591)	+	(T)n	Simple_repeat	1	29	(0)	3804715
557	20.9	6.2	8.5	chr8	23040491	23040773	(122097863)	+	L1MA7	LINE/L1	2389	2664	(4853)	3827242
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
367	28.4	7.9	7.1	chr8	65471311	65471598	(79667038)	+	L2c	LINE/L2	3137	3426	(0)	3885820
2770	10.9	0.0	0.2	chr8	72600614	72601009	(72537627)	+	L1PA13	LINE/L1	5769	6163	(0)	3896674
6941	16.7	2.9	2.6	chr8	75163460	75164792	(69973844)	C	L1MA4	LINE/L1	(4990)	2575	1239	3900610
763	30.1	10.1	8.4	chr8	76051580	76052181	(69086455)	+	MLT1H2-int	LTR/ERVL-MaLR	14	695	(794)	3901787
1231	31.8	9.3	3.3	chr8	76052180	76052784	(69085852)	+	MLT1H2-int	LTR/ERVL-MaLR	842	1486	(3)	3901787
2355	10.9	0.0	0.3	chr8	80243301	80243611	(64895025)	+	AluSg	SINE/Alu	1	310	(0)	3907320
2244	10.1	1.0	0.0	chr8	80243952	80244248	(64894388)	C	AluSx	SINE/Alu	(12)	300	1	3907321
13367	13.4	3.5	3.2	chr8	92447828	92448660	(52689976)	+	Tigger1	DNA/TcMar-Tigger	1475	2260	(158)	3923858
4115	15.7	2.2	0.7	chr8	92919338	92920154	(52218482)	C	L1MA4	LINE/L1	(2192)	3951	3123	3924473
1698	17.5	4.0	3.6	chr8	142370287	142370589	(2768047)	+	AluJr	SINE/Alu	1	304	(8)	4004817
709	25.1	1.9	6.2	chr8	142370601	142370923	(2767713)	+	L1MCc	LINE/L1	1964	2272	(4856)	4004815
477	24.3	1.7	1.6	chr8	142370891	142371036	(2767600)	+	L1MC4a	LINE/L1	6233	6405	(1477)	4004812
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
226	12.1	0.0	0.0	chr8	143669745	143669777	(1468859)	+	Alu	SINE/Alu	2	34	(99)	4006490
303	13.6	4.3	2.9	chr8	143669777	143669844	(1468792)	C	MSTA	LTR/ERVL-MaLR	(175)	253	185	4006491
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
2293	10.7	0.3	1.6	chr9	603673	603982	(137790735)	+	AluSx	SINE/Alu	1	306	(6)	4009446
12	19.6	2.9	0.0	chr9	604009	604043	(137790674)	+	(TCTTTG)n	Simple_repeat	1	36	(0)	4009447
222	25.0	0.0	0.0	chr9	604225	604272	(137790445)	C	MIR	SINE/MIR	(2)	260	213	4009448
2413	10.3	0.3	0.0	chr9	4405074	4405383	(133989334)	+	AluSp	SINE/Alu	2	312	(1)	4014996
12616	10.6	1.1	2.8	chr9	4405384	4406302	(133988415)	+	L1MA2	LINE/L1	4759	5636	(1929)	4014993
11874	19.3	7.4	3.2	chr9	5707687	5707970	(132686747)	C	L1MB5	LINE/L1	(3798)	2846	2472	4016904
29	5.8	0.0	0.0	chr9	5707971	5708006	(132686711)	+	(TTG)n	Simple_repeat	1	36	(0)	4016908
4327	19.5	8.3	2.2	chr9	5708007	5708947	(132685770)	C	L1MB5	LINE/L1	(5046)	2471	1452	4016904
6059	21.1	2.6	2.5	chr9	31799552	31801460	(106593257)	+	L1MA4	LINE/L1	1254	3154	(4411)	4052876
2721	20.0	9.5	0.8	chr9	39015113	39015975	(99378742)	C	L1MC2	LINE/L1	(344)	6000	5063	4065512
878	17.6	0.0	0.7	chr9	39015978	39016119	(99378598)	+	FRAM	SINE/Alu	22	162	(14)	4065513
5135	19.5	3.9	3.0	chr9	39016149	39017361	(99377356)	C	L1MC2	LINE/L1	(1097)	5049	3824	4065512
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
5590	23.3	3.2	3.9	chr9	73681164	73684116	(64710601)	C	L1M1	LINE/L1	(2792)	4770	1832	4088397
2036	16.5	4.9	1.9	chr9	73684129	73684504	(64710213)	C	MER61D	LTR/ERV1	(0)	501	114	4088398
1661	20.2	0.4	0.7	chr9	93844316	93844592	(44550125)	C	AluJb	SINE/Alu	(36)	276	1	4118635
5602	17.0	1.4	0.9	chr9	93844593	93845543	(44549174)	C	L1MA4	LINE/L1	(4370)	2195	1241	4118629
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
2600	6.0	0.0	0.0	chrX	71338840	71339141	(84701754)	C	AluY	SINE/Alu	(9)	302	1	4461330
982	23.1	2.6	2.9	chrX	71339142	71339291	(84701604)	C	L1M4	LINE/L1	(4043)	2603	2452	4461316
783	12.0	0.8	3.2	chrX	71339304	71339428	(84701467)	+	FLAM_C	SINE/Alu	12	133	(10)	4461331
801	15.9	4.3	0.0	chrX	71339432	71339588	(84701307)	C	L1M4a2	LINE/L1	(936)	1720	1557	4461332
2517	6.3	0.0	3.2	chrX	107672389	107672704	(48368191)	+	AluY	SINE/Alu	1	306	(5)	4504614
1227	9.7	0.0	4.5	chrX	107672705	107672867	(48368028)	+	AluSc	SINE/Alu	135	293	(16)	4504613
27	11.7	2.1	0.0	chrX	107673123	107673170	(48367725)	+	(GTGT)n	Simple_repeat	1	49	(0)	4504615
7242	13.8	2.8	0.8	chrX	108020162	108021394	(48019501)	C	L1M3f	LINE/L1	(4069)	1259	2	4505184
2314	11.9	0.3	2.2	chrX	120231235	120231552	(35809343)	+	AluJb	SINE/Alu	1	312	(0)	4522619
12795	12.4	5.7	3.1	chrX	120231553	120233384	(35807511)	+	MER4-int	LTR/ERV1	3138	5062	(1536)	4522618
297	24.6	0.0	0.0	chrY	10627178	10627242	(46600173)	C	AluJo	SINE/Alu	(20)	292	228	4587825
890	21.9	0.8	0.9	chrY	10627274	10627798	(46599617)	+	(CCATT)n	Simple_repeat	3	528	(0)	4587826
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
314	22.4	2.9	0.0	chrY	10950282	10950348	(46277067)	C	AluYj4	SINE/Alu	(18)	293	225	4588504
235	26.3	10.9	0.0	chrY	10950303	10950359	(46277056)	+	SVA_A	Retroposon/SVA	332	395	(992)	4588505
4917	25.0	0.5	0.3	chrY	10950360	10951162	(46276253)	+	(TCCAC)n	Simple_repeat	1	804	(0)	4588506
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157