218	16.1	6.7	1.8	chr1	1400943	1400999	(247555423)	+	L3	LINE/CR1	3123	3182	(917)	1684
15	19.8	7.5	2.8	chr1	1407559	1407625	(247548797)	+	G-rich	Low_complexity	1	72	(0)	1698
33	21.2	2.9	6.4	chr1	1909165	1909300	(247047122)	+	G-rich	Low_complexity	1	140	(0)	2604
2583	4.4	0.0	0.0	chr1	1909409	1909706	(247046716)	+	AluSx1	SINE/Alu	1	298	(14)	2605
12	13.8	11.9	3.0	chr1	6199328	6199386	(242757036)	+	G-rich	Low_complexity	1	66	(0)	7812
228	17.0	0.0	4.1	chr1	6208675	6208723	(242747699)	+	MIRc	SINE/MIR	106	152	(116)	7836
59	17.4	2.7	3.3	chr1	6244934	6245081	(242711341)	+	(CCCTC)n	Simple_repeat	1	152	(0)	7899
14	17.8	0.0	2.9	chr1	6393307	6393340	(242563082)	+	(GGC)n	Simple_repeat	1	34	(0)	8132
17	10.5	0.0	10.0	chr1	6393473	6393525	(242562897)	+	(CCGCC)n	Simple_repeat	1	47	(0)	8133
14	24.0	1.5	6.0	chr1	6393526	6393533	(242562889)	+	(CGCGC)n	Simple_repeat	6	67	(0)	8134
2253	11.8	0.0	0.0	chr1	6398465	6398769	(242557653)	C	AluSx1	SINE/Alu	(7)	305	1	8144
1621	25.4	13.8	3.0	chr1	6398770	6399550	(242556872)	+	L2a	LINE/L2	2300	3420	(6)	8142
195	32.1	4.5	4.5	chr1	6625797	6625907	(242330515)	+	L2a	LINE/L2	1829	1939	(1480)	8560
424	25.2	8.8	8.8	chr1	6625914	6626026	(242330396)	C	L1ME3A	LINE/L1	(7)	6166	6045	8561
2142	8.7	2.3	2.0	chr1	6702134	6702431	(242253991)	C	AluSx	SINE/Alu	(13)	299	1	8707
11	21.3	4.4	2.1	chr1	6784676	6784720	(242171702)	+	(GCCGGC)n	Simple_repeat	1	47	(0)	8925
387	27.6	6.7	6.4	chr1	7942786	7942956	(241013466)	+	MIRb	SINE/MIR	59	238	(30)	10612
17	11.2	0.0	0.0	chr1	8026302	8026330	(240930092)	+	(CCG)n	Simple_repeat	1	29	(0)	10774
510	24.0	9.9	13.7	chr1	8858736	8858901	(240097521)	+	MLT2C1	LTR/ERVL	3	178	(219)	12411
1922	13.3	1.4	0.7	chr1	8858902	8859194	(240097228)	C	AluSx	SINE/Alu	(16)	296	2	12412
510	24.0	9.9	13.7	chr1	8859195	8859355	(240097067)	+	MLT2C1	LTR/ERVL	179	316	(81)	12411
15	8.2	12.7	3.2	chr1	8879289	8879343	(240077079)	+	(CGCCTG)n	Simple_repeat	1	62	(0)	12447
636	25.5	4.0	5.2	chr1	10947023	10947268	(238009154)	C	MIRb	SINE/MIR	(21)	247	2	16683
2265	7.9	0.0	2.6	chr1	11061175	11061477	(237894945)	+	AluSc	SINE/Alu	3	297	(12)	16953
874	13.4	1.6	0.0	chr1	11061488	11061614	(237894808)	+	FLAM_C	SINE/Alu	2	130	(13)	16954
1532	15.4	5.4	0.4	chr1	11473431	11473676	(237482746)	+	AluJb	SINE/Alu	37	295	(17)	17786
576	25.6	2.5	3.7	chr1	11720083	11720244	(237236178)	C	MIRb	SINE/MIR	(18)	250	91	18312
768	7.9	0.0	5.0	chr1	11909807	11909926	(237046496)	C	U5	snRNA	(1)	115	2	18711
462	29.9	6.6	0.0	chr1	12161307	12161490	(236794932)	C	MER117	DNA/hAT-Charlie	(0)	197	1	19291
359	23.6	3.0	3.7	chr1	12161491	12161605	(236794817)	C	MIR3	SINE/MIR	(51)	157	42	19290
241	32.4	3.4	10.4	chr1	12450133	12450253	(236506169)	C	MIRb	SINE/MIR	(99)	169	57	19810
1861	19.6	9.2	0.5	chr1	12450437	12450815	(236505607)	+	MER47B	DNA/TcMar-Tigger	4	418	(0)	19812
455	29.1	13.1	5.7	chr1	12472327	12472698	(236483724)	C	HAL1	LINE/L1	(2082)	425	22	19840
336	16.0	4.8	1.0	chr1	12619303	12619402	(236337020)	C	MER5A	DNA/hAT-Charlie	(42)	147	33	20097
593	14.3	8.0	0.0	chr1	15791858	15791983	(233164439)	+	L1MB3	LINE/L1	6044	6180	(3)	26041
1763	15.3	2.4	0.4	chr1	15886992	15887272	(233069150)	C	AluJo	SINE/Alu	(25)	287	1	26278
12	15.8	2.6	5.0	chr1	16440347	16440385	(232516037)	+	(AGGCAG)n	Simple_repeat	1	40	(0)	27498
1306	28.1	6.9	1.6	chr1	16633870	16634380	(232322042)	+	L1ME4b	LINE/L1	161	690	(202)	27862
471	30.5	2.5	3.8	chr1	19640132	19640291	(229316131)	+	L2a	LINE/L2	3269	3426	(0)	34090
305	27.8	2.5	0.0	chr1	19640283	19640398	(229316024)	C	MIR	SINE/MIR	(67)	195	79	34105
15	14.8	9.3	1.7	chr1	19640836	19640889	(229315533)	+	(GGCCCA)n	Simple_repeat	1	59	(0)	34106
380	32.0	3.2	0.8	chr1	21648172	21648294	(227308128)	C	MIR3	SINE/MIR	(62)	146	21	38377
1940	8.0	11.8	0.0	chr1	21658942	21659204	(227297218)	C	AluSp	SINE/Alu	(15)	298	1	38409
185	32.1	4.7	0.0	chr1	21673416	21673496	(227282926)	C	MIR3	SINE/MIR	(56)	152	68	38437
16	19.5	0.0	0.0	chr1	21782991	21783025	(227173397)	+	(CCG)n	Simple_repeat	1	35	(0)	38657
1577	14.7	4.2	5.5	chr1	23102950	23103244	(225853178)	C	AluJr	SINE/Alu	(20)	292	1	41601
12	19.4	0.0	5.1	chr1	23368550	23368588	(225587834)	+	A-rich	Low_complexity	1	39	(0)	42241
13	9.3	0.0	0.0	chr1	23554620	23554642	(225401780)	+	(GAAG)n	Simple_repeat	1	23	(0)	42729
13	15.2	2.5	4.9	chr1	23743733	23743772	(225212650)	+	G-rich	Low_complexity	1	41	(0)	43265
11	21.7	0.0	2.9	chr1	23980380	23980414	(224976008)	+	(CTCCAC)n	Simple_repeat	1	35	(0)	43830
12	26.4	2.2	0.0	chr1	24642576	24642620	(224313802)	+	(GAGGCC)n	Simple_repeat	1	46	(0)	45376
193	26.8	3.5	8.2	chr1	25801033	25801093	(223155329)	+	L3	LINE/CR1	826	883	(3216)	47856
251	31.2	10.0	1.4	chr1	25801229	25801374	(223155048)	+	MIRc	SINE/MIR	4	163	(105)	47857
677	29.1	6.9	3.6	chr1	25880314	25880566	(223075856)	+	MIR	SINE/MIR	4	265	(3)	48011
734	24.9	6.6	0.0	chr1	25992523	25992691	(222963731)	C	MIRb	SINE/MIR	(27)	241	61	48294
756	33.2	7.2	6.4	chr1	25992745	25993229	(222963193)	+	MLT1K	LTR/ERVL-MaLR	107	595	(0)	48295
241	32.0	10.3	0.0	chr1	26035535	26035656	(222920766)	+	L2c	LINE/L2	3030	3165	(222)	48399
15	20.0	2.5	0.0	chr1	26170107	26170146	(222786276)	+	(CGACCC)n	Simple_repeat	1	41	(0)	48734
2228	9.3	0.7	0.0	chr1	26408260	26408548	(222547874)	+	AluSz	SINE/Alu	1	291	(21)	49285
224	21.3	4.1	0.0	chr1	26621616	26621662	(222334760)	C	MIR1_Amn	SINE/MIR	(62)	168	120	49807
16	20.9	2.5	0.0	chr1	26696766	26696805	(222259617)	+	(CGG)n	Simple_repeat	1	41	(0)	50005
403	30.4	16.9	0.2	chr1	27542523	27542734	(221413688)	C	MIRb	SINE/MIR	(4)	258	8	52004
454	23.5	2.9	9.1	chr1	27669625	27669803	(221286619)	+	MIR	SINE/MIR	63	233	(29)	52266
248	35.6	4.9	5.4	chr1	27915036	27915240	(221041182)	C	L3	LINE/CR1	(198)	3901	3698	52826
2317	9.9	0.0	1.0	chr1	27936737	27937048	(221019374)	+	AluY	SINE/Alu	1	309	(2)	52897
41	15.7	0.0	2.4	chr1	28260101	28260183	(220696239)	+	(CCCCTC)n	Simple_repeat	1	83	(0)	53685
2043	13.9	0.0	1.0	chr1	28327973	28328274	(220628148)	C	AluJb	SINE/Alu	(13)	299	1	53909
2389	8.2	0.0	0.0	chr1	28328414	28328707	(220627715)	C	AluSz	SINE/Alu	(18)	294	1	53910
1790	15.1	0.0	0.3	chr1	28505413	28505711	(220450711)	C	AluSz6	SINE/Alu	(13)	299	2	54373
1954	11.4	4.5	0.0	chr1	28506188	28506484	(220449938)	C	AluSx	SINE/Alu	(1)	311	1	54374
1252	9.7	0.0	0.6	chr1	28506775	28506950	(220449472)	C	AluSg	SINE/Alu	(85)	225	51	54375
12	20.7	5.1	0.0	chr1	28553062	28553100	(220403322)	+	(GCCCC)n	Simple_repeat	1	41	(0)	54505
2285	7.7	3.7	0.0	chr1	28732967	28733253	(220223169)	C	AluSc8	SINE/Alu	(13)	298	1	55016
1171	14.8	0.0	0.0	chr1	28733256	28733424	(220222998)	C	AluSc8	SINE/Alu	(15)	296	128	55017
456	28.5	8.9	4.4	chr1	28733433	28733551	(220222871)	+	L2b	LINE/L2	2924	3050	(337)	55010
2405	8.6	0.0	0.6	chr1	28733552	28733865	(220222557)	C	AluSq2	SINE/Alu	(1)	312	1	55018
19	20.8	0.0	6.3	chr1	29181798	29181860	(219774562)	+	(GGC)n	Simple_repeat	1	63	(0)	56088
2781	18.4	2.3	0.0	chr1	29722523	29722983	(219233439)	C	MER70A	LTR/ERVL	(0)	472	1	57162
505	19.0	25.6	0.0	chr1	30778294	30778456	(218177966)	+	MIR	SINE/MIR	21	239	(23)	59041
667	27.5	4.6	11.8	chr1	30778486	30778840	(218177582)	+	MLT1K	LTR/ERVL-MaLR	101	428	(167)	59042
271	28.6	3.2	0.0	chr1	30779487	30779577	(218176845)	C	MIRc	SINE/MIR	(101)	167	74	59045
187	35.4	12.4	1.0	chr1	30866555	30866654	(218089768)	+	MIRb	SINE/MIR	116	228	(40)	59266
19	18.3	6.9	2.6	chr1	31764685	31764756	(217191666)	+	(CATGTG)n	Simple_repeat	1	77	(0)	61277
2015	12.5	2.3	2.6	chr1	32120869	32121171	(216835251)	C	AluSz	SINE/Alu	(10)	302	1	62138
1476	12.8	7.9	0.4	chr1	32222815	32223048	(216733374)	+	AluJo	SINE/Alu	1	253	(59)	62334
2140	25.5	7.9	17.1	chr1	32395125	32395608	(216560814)	+	L2a	LINE/L2	1636	2052	(1367)	62773
12	15.7	2.6	5.0	chr1	33036893	33036931	(215919491)	+	(ACGC)n	Simple_repeat	1	40	(0)	64297
654	23.7	9.4	7.8	chr1	33037181	33037469	(215918953)	+	L1M5	LINE/L1	5514	5802	(360)	64298
344	26.7	3.2	0.0	chr1	34859978	34860067	(214096355)	C	L2c	LINE/L2	(5)	3382	3290	67556
11	14.9	4.9	4.7	chr1	37764624	37764664	(211191758)	+	(CTCCAC)n	Simple_repeat	1	43	(0)	73397
275	32.6	2.1	0.0	chr1	38076052	38076146	(210880276)	+	MIR3	SINE/MIR	82	178	(30)	74035
269	34.0	3.6	0.0	chr1	38076336	38076441	(210879981)	C	MIRb	SINE/MIR	(6)	262	153	74036
1851	18.2	0.3	1.0	chr1	39139947	39140253	(209816169)	C	AluJr	SINE/Alu	(6)	306	2	76180
495	28.2	14.2	0.6	chr1	39140254	39140296	(209816126)	C	MIRc	SINE/MIR	(207)	61	18	76179
187	38.4	6.8	3.2	chr1	39140326	39140481	(209815941)	+	L2c	LINE/L2	3205	3366	(9)	76178
199	17.4	14.8	0.0	chr1	39140510	39140555	(209815867)	+	MIRb	SINE/MIR	199	252	(16)	76181
255	19.6	5.5	0.0	chr1	39140517	39140567	(209815855)	+	L2a	LINE/L2	3365	3418	(8)	76182
716	13.9	4.8	12.6	chr1	39711208	39711322	(209245100)	C	MLT2C2	LTR/ERVL	(354)	110	2	77260
310	29.4	22.2	2.3	chr1	39711323	39711507	(209244915)	+	L2a	LINE/L2	2990	3211	(215)	77268
673	15.0	10.3	0.0	chr1	39711642	39711781	(209244641)	+	LTR50	LTR/ERVL	1	156	(639)	77269
13	20.1	2.0	5.8	chr1	39789020	39789070	(209167352)	+	G-rich	Low_complexity	1	52	(0)	77403
190	21.1	1.9	1.9	chr1	39799240	39799292	(209157130)	+	MIRb	SINE/MIR	118	170	(98)	77428
681	32.5	1.5	0.5	chr1	40059793	40059984	(208896438)	C	MIR3	SINE/MIR	(12)	196	3	78038
13	32.7	0.0	0.0	chr1	40161427	40161479	(208794943)	+	G-rich	Low_complexity	1	53	(0)	78243
3339	20.9	17.4	0.5	chr1	40256208	40257324	(208699098)	C	Charlie2a	DNA/hAT-Charlie	(37)	2824	1478	78444
18	17.0	1.7	6.6	chr1	40783671	40783730	(208172692)	+	(CGCT)n	Simple_repeat	1	61	(0)	79495
17	0.0	0.0	0.0	chr1	40875913	40875933	(208080489)	+	(TGC)n	Simple_repeat	1	21	(0)	79702
29	3.2	0.0	0.0	chr1	40876103	40876134	(208080288)	+	(GTTT)n	Simple_repeat	1	32	(0)	79703
516	29.5	5.5	4.4	chr1	40876191	40876442	(208079980)	+	MIR	SINE/MIR	2	256	(6)	79704
17	26.3	3.1	1.5	chr1	42335243	42335307	(206621115)	+	(CCG)n	Simple_repeat	1	67	(0)	82310
217	31.9	1.4	0.0	chr1	42677085	42677153	(206279269)	+	MIRc	SINE/MIR	158	227	(41)	82962
2098	10.0	2.4	1.0	chr1	42677192	42677481	(206278941)	+	AluSz6	SINE/Alu	1	294	(18)	82963
1260	22.4	11.2	1.6	chr1	43172953	43173396	(205783026)	C	Kanga2_a	DNA/TcMar-Tc2	(27)	861	370	83895
268	26.2	6.7	10.6	chr1	43551979	43552166	(205404256)	+	L2	LINE/L2	1670	1849	(1570)	84490
234	30.9	0.0	4.1	chr1	43552199	43552296	(205404126)	+	L2-3_Crp	LINE/L2	719	812	(1284)	84491
411	23.6	12.4	0.9	chr1	43552322	43552428	(205403994)	+	MIRb	SINE/MIR	38	158	(110)	84492
38	2.8	0.0	0.0	chr1	44031167	44031203	(204925219)	+	(CA)n	Simple_repeat	1	37	(0)	85306
13	13.2	6.1	0.0	chr1	44031405	44031437	(204924985)	+	(GCCGC)n	Simple_repeat	1	35	(0)	85307
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
731	16.3	0.0	2.8	chr1	44730545	44730685	(204225737)	+	AluJr	SINE/Alu	175	311	(1)	86587
1001	16.8	11.2	0.0	chr1	44730709	44730899	(204225523)	+	AluSx4	SINE/Alu	7	221	(89)	86588
2451	7.0	1.0	0.0	chr1	44842275	44842576	(204113846)	C	AluSx1	SINE/Alu	(7)	305	1	86816
273	30.2	7.2	10.1	chr1	46348247	46348430	(202607992)	+	L2c	LINE/L2	3111	3287	(100)	89856
2386	9.2	1.6	0.3	chr1	46348431	46348736	(202607686)	+	AluSq2	SINE/Alu	1	310	(3)	89857
247	28.9	1.2	12.6	chr1	51879700	51879747	(197076675)	C	L2a	LINE/L2	(51)	3375	3336	99631
1935	14.2	0.7	4.2	chr1	51879748	51880057	(197076365)	+	AluJb	SINE/Alu	1	299	(13)	99632
247	28.9	1.2	12.6	chr1	51880058	51880103	(197076319)	C	L2a	LINE/L2	(91)	3335	3292	99631
276	23.7	3.5	1.2	chr1	54052722	54052803	(194903619)	+	L2c	LINE/L2	3245	3355	(32)	104307
287	30.3	5.7	0.0	chr1	54541903	54542001	(194414421)	+	L2b	LINE/L2	3267	3371	(4)	105333
2009	18.3	2.0	3.5	chr1	65480935	65481330	(183475092)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	125860
5960	16.0	7.2	2.8	chr1	72692365	72694089	(176262333)	C	MER50-int	LTR/ERV1	(5414)	1791	2	136539
3636	18.5	2.9	1.9	chr1	72694127	72694815	(176261607)	C	MER50	LTR/ERV1	(12)	722	27	136539
2271	12.2	0.0	1.0	chr1	77646210	77646521	(171309901)	C	AluJb	SINE/Alu	(2)	310	2	143222
1318	25.0	2.7	2.4	chr1	77646601	77647010	(171309412)	+	L1MB7	LINE/L1	32	442	(5958)	143223
36	13.7	3.0	5.9	chr1	89483857	89483955	(159472467)	+	(CTAATA)n	Simple_repeat	1	102	(0)	159914
15	15.9	2.9	0.0	chr1	89483973	89484007	(159472415)	+	A-rich	Low_complexity	1	36	(0)	159915
17	19.2	2.0	2.0	chr1	108692627	108692691	(140263731)	+	(GCAGCA)n	Simple_repeat	1	65	(0)	187165
1084	14.6	6.2	0.5	chr1	109478696	109478908	(139477514)	C	L1ME2z	LINE/L1	(10)	6434	6209	188666
47	0.0	0.0	0.0	chr1	109656551	109656590	(139299832)	+	(TG)n	Simple_repeat	1	40	(0)	188913
383	26.9	9.9	0.0	chr1	112465988	112466132	(136490290)	+	MIRb	SINE/MIR	89	249	(19)	193160
2315	10.7	0.0	0.7	chr1	113043163	113043472	(135912950)	+	AluSq2	SINE/Alu	1	308	(5)	194349
963	19.9	9.5	5.2	chr1	113187852	113187972	(135768450)	C	L1ME2z	LINE/L1	(408)	6036	5913	194631
2460	18.3	4.3	1.1	chr1	113187973	113188425	(135767997)	+	MER70A	LTR/ERVL	1	468	(4)	194632
1355	19.9	6.0	3.1	chr1	113786301	113786686	(135169736)	+	MLT1D	LTR/ERVL-MaLR	1	468	(37)	195513
449	28.1	9.5	3.4	chr1	116501924	116502129	(132454293)	C	MIRb	SINE/MIR	(6)	262	43	199803
187	27.5	9.0	2.1	chr1	116570189	116570281	(132386141)	+	MIR	SINE/MIR	135	234	(28)	199919
213	24.1	1.6	2.8	chr1	117060732	117060815	(131895607)	+	MIR3	SINE/MIR	64	147	(115)	200698
1273	6.1	0.0	1.8	chr1	120850818	120850985	(128105437)	C	U1	snRNA	(0)	165	1	206170
22	22.9	0.0	0.0	chr1	144412465	144412510	(104543912)	+	G-rich	Low_complexity	1	46	(0)	209361
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
2569	5.7	0.0	0.0	chr1	151254130	151254428	(97701994)	C	AluSx3	SINE/Alu	(12)	299	1	220825
12	17.5	3.1	0.0	chr1	153958498	153958529	(94997893)	+	(CTCC)n	Simple_repeat	1	33	(0)	225133
1144	15.2	0.0	0.6	chr1	153967505	153967681	(94988741)	+	AluJb	SINE/Alu	137	312	(0)	225151
15	7.6	0.0	6.2	chr1	155001128	155001159	(93955263)	+	(GAGG)n	Simple_repeat	1	32	(0)	227186
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
221	31.6	7.3	2.6	chr1	156291138	156291254	(92665168)	+	MIR	SINE/MIR	136	258	(4)	229861
17	18.4	0.0	4.3	chr1	156501041	156501087	(92455335)	+	G-rich	Low_complexity	1	47	(0)	230239
14	4.9	0.0	0.0	chr1	156501142	156501162	(92455260)	+	(CCGC)n	Simple_repeat	1	21	(0)	230240
329	34.8	12.2	1.2	chr1	157089657	157089816	(91866606)	+	MIR3	SINE/MIR	10	189	(19)	231254
662	1.3	0.0	0.0	chr1	161440822	161440896	(87515526)	C	tRNA-Asp-GAY	tRNA	(0)	75	1	237538
699	25.9	0.8	8.2	chr1	166490006	166490287	(82466135)	C	LTR12F	LTR/ERV1	(22)	497	237	245350
1298	29.7	7.1	1.1	chr1	172531682	172532158	(76424264)	+	L4_A_Mam	LINE/RTE-X	3531	4038	(952)	254352
15	40.7	0.0	1.2	chr1	174167337	174167422	(74789000)	+	(TATATA)n	Simple_repeat	1	86	(0)	256826
13	12.1	0.0	3.5	chr1	174167397	174167425	(74788997)	+	(ACAT)n	Simple_repeat	1	29	(0)	256827
21	22.1	7.3	0.0	chr1	178725125	178725192	(70231230)	+	(CG)n	Simple_repeat	1	73	(0)	263565
14	9.6	0.0	0.0	chr1	179882205	179882227	(69074195)	+	(TCC)n	Simple_repeat	1	23	(0)	265466
11	18.9	8.0	1.9	chr1	181089187	181089236	(67867186)	+	(GCCGCA)n	Simple_repeat	1	54	(0)	267455
12	12.2	3.7	0.0	chr1	182391717	182391743	(66564679)	+	GA-rich	Low_complexity	1	28	(0)	269390
555	13.9	0.0	0.0	chr1	182869142	182869213	(66087209)	+	AluSz	SINE/Alu	1	72	(240)	270181
749	6.8	0.0	3.7	chr1	202692991	202693097	(46263325)	C	L1PB1	LINE/L1	(1)	6150	6048	298322
2086	12.0	0.7	2.3	chr1	203881677	203881977	(45074445)	C	AluSz	SINE/Alu	(16)	296	1	300508
3039	22.8	3.4	5.0	chr1	203881978	203882101	(45074321)	C	L1ME1	LINE/L1	(308)	6044	5925	300507
2131	11.3	0.0	2.6	chr1	203882102	203882411	(45074011)	+	AluSx1	SINE/Alu	1	302	(10)	300509
15	33.1	2.6	1.2	chr1	204226841	204226918	(44729504)	+	(CTA)n	Simple_repeat	1	80	(0)	301211
586	22.5	2.8	2.1	chr1	204226924	204227064	(44729358)	C	MIRb	SINE/MIR	(9)	259	118	301212
16	27.7	2.9	2.8	chr1	204647528	204647597	(44308825)	+	G-rich	Low_complexity	1	72	(0)	301977
1032	17.8	9.9	0.0	chr1	204647753	204647988	(44308434)	+	MER33	DNA/hAT-Charlie	5	266	(58)	301978
227	26.4	1.9	0.0	chr1	204648028	204648080	(44308342)	+	MIRb	SINE/MIR	32	85	(183)	301979
13	24.5	0.0	6.7	chr1	205321319	205321378	(43635044)	+	(CCGCCGC)n	Simple_repeat	1	60	(0)	303213
1597	17.9	13.3	3.4	chr1	206735427	206735871	(42220551)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	8	305601
22	26.6	1.4	1.4	chr1	207243831	207243901	(41712521)	+	(CTCTCT)n	Simple_repeat	1	72	(0)	306393
15	15.3	2.6	2.6	chr1	207321816	207321853	(41634569)	+	(GCT)n	Simple_repeat	1	39	(0)	306485
1869	15.3	4.1	3.3	chr1	207579398	207579883	(41376539)	+	MER66C	LTR/ERV1	1	536	(19)	306857
17	20.3	2.4	0.0	chr1	209675275	209675315	(39281107)	+	(TCC)n	Simple_repeat	1	42	(0)	310028
2023	14.1	0.7	0.3	chr1	211316754	211317043	(37639379)	C	AluSx1	SINE/Alu	(20)	292	2	312490
1317	18.4	7.8	5.9	chr1	211317044	211317114	(37639308)	C	Tigger3a	DNA/TcMar-Tigger	(274)	74	1	312489
534	26.9	7.6	3.3	chr1	211722194	211722408	(37234014)	C	MER103C	DNA/hAT-Charlie	(71)	226	2	313260
889	24.5	4.7	0.0	chr1	212125170	212125373	(36831049)	C	MIR	SINE/MIR	(15)	247	34	313939
256	25.9	9.6	1.2	chr1	212125560	212125645	(36830777)	+	L2c	LINE/L2	3282	3375	(12)	313940
12	24.1	0.0	0.0	chr1	212608883	212608916	(36347506)	+	(CCCGC)n	Simple_repeat	1	34	(0)	314847
21	15.0	0.0	4.2	chr1	223233524	223233571	(25722851)	+	(ACAG)n	Simple_repeat	1	48	(0)	330426
17	23.8	3.6	0.0	chr1	224434953	224435007	(24521415)	+	(CCGACC)n	Simple_repeat	1	57	(0)	332552
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
349	35.8	8.5	1.9	chr1	226002404	226002665	(22953757)	+	MamRTE1	LINE/RTE-BovB	3478	3758	(54)	334985
12	31.8	0.0	1.8	chr1	228275625	228275680	(20680742)	+	G-rich	Low_complexity	1	56	(0)	338518
8883	18.8	1.8	4.2	chr1	229353684	229354798	(19601624)	C	L1MB3	LINE/L1	(625)	5558	4450	340109
790	15.7	2.4	0.0	chr1	229354799	229354919	(19601503)	C	FLAM_A	SINE/Alu	(18)	124	1	340111
1561	17.9	1.6	4.7	chr1	229430487	229430805	(19525617)	+	AluJr	SINE/Alu	3	311	(1)	340254
979	15.0	1.8	1.2	chr1	231211795	231211956	(17744466)	+	AluJb	SINE/Alu	4	166	(146)	343114
13	18.8	0.0	0.0	chr1	234478558	234478588	(14477834)	+	(CCCGCC)n	Simple_repeat	1	31	(0)	347927
26	44.7	0.0	0.0	chr1	234520468	234520629	(14435793)	+	(TGTG)n	Simple_repeat	1	162	(0)	348023
296	29.1	9.1	6.6	chr1	234520679	234520891	(14435531)	+	MIRc	SINE/MIR	4	222	(46)	348024
13	18.9	0.0	0.0	chr1	243254979	243255008	(5701414)	+	(GCG)n	Simple_repeat	1	30	(0)	362301
18	13.9	0.0	0.0	chr1	243255125	243255157	(5701265)	+	(TCG)n	Simple_repeat	1	33	(0)	362302
334	26.7	10.3	2.0	chr1	246507473	246507667	(2448755)	C	L1ME2z	LINE/L1	(0)	6444	6232	367609
1494	12.4	1.0	16.4	chr1	246507699	246508046	(2448376)	C	AluSz	SINE/Alu	(17)	295	2	367610
743	23.3	2.6	3.1	chr1	247103660	247103854	(1852568)	+	MER57E3	LTR/ERV1	294	487	(0)	368653
12	25.6	0.0	0.0	chr1	248838551	248838587	(117835)	+	G-rich	Low_complexity	1	37	(0)	370880
218	21.7	4.8	4.8	chr1	248858380	248858442	(97980)	+	MIR3	SINE/MIR	104	166	(42)	370896
12	6.3	8.1	5.0	chr1	248906545	248906581	(49841)	+	(GAGGCCG)n	Simple_repeat	1	40	(0)	370979
13	11.5	2.2	8.7	chr10	5813816	5813860	(127983562)	+	G-rich	Low_complexity	1	46	(0)	378340
240	27.6	0.0	0.0	chr10	22056257	22056314	(111741108)	+	L2c	LINE/L2	3281	3338	(49)	404751
337	26.9	14.2	8.7	chr10	22056301	22056426	(111740996)	+	L2c	LINE/L2	3282	3426	(0)	404752
257	25.0	16.6	0.7	chr10	22056532	22056668	(111740754)	C	L2b	LINE/L2	(48)	3378	3193	404753
2430	17.3	4.1	0.9	chr10	28963826	28964275	(104833147)	+	MER70A	LTR/ERVL	1	465	(7)	416045
6384	14.4	3.9	1.0	chr10	31961082	31962010	(101835412)	C	MER50-int	LTR/ERV1	(6251)	954	1	421053
4383	13.7	2.1	2.9	chr10	31962094	31962164	(101835258)	C	MER50	LTR/ERV1	(23)	711	648	421053
2384	10.8	0.0	0.0	chr10	31962165	31962469	(101834953)	C	AluSx1	SINE/Alu	(7)	305	1	421055
31	0.0	0.0	2.9	chr10	43396888	43396921	(90400501)	+	(GGGAG)n	Simple_repeat	1	34	(0)	433409
12	22.1	3.9	3.8	chr10	43397129	43397179	(90400243)	+	G-rich	Low_complexity	1	53	(0)	433410
24	20.4	3.5	4.5	chr10	45001106	45001191	(88796231)	+	G-rich	Low_complexity	1	89	(0)	435515
306	25.8	0.0	6.1	chr10	49762596	49762694	(84034728)	+	MIRb	SINE/MIR	130	222	(46)	442268
23	11.4	0.0	0.0	chr10	59906294	59906331	(73891091)	+	(CCG)n	Simple_repeat	1	38	(0)	456271
1693	16.4	1.4	5.8	chr10	68958737	68958874	(64838548)	C	AluJr	SINE/Alu	(180)	132	1	470528
494	21.1	0.0	0.0	chr10	68958940	68959029	(64838393)	+	AluJo	SINE/Alu	209	298	(14)	470530
259	30.8	5.8	0.8	chr10	69315807	69315937	(64481485)	+	MIRc	SINE/MIR	12	149	(119)	471353
1966	11.6	2.1	1.4	chr10	69332358	69332676	(64464746)	C	AluSz6	SINE/Alu	(0)	312	1	471389
350	26.4	11.2	3.6	chr10	69332677	69332812	(64464610)	+	MIRc	SINE/MIR	118	266	(2)	471388
1114	25.4	15.8	1.5	chr10	70559176	70559937	(63237485)	C	L2a	LINE/L2	(260)	3166	2273	473715
323	24.5	1.0	7.3	chr10	70585828	70585937	(63211485)	+	MIRb	SINE/MIR	49	151	(117)	473762
345	26.3	12.6	0.0	chr10	70738274	70738391	(63059031)	C	MIRb	SINE/MIR	(117)	151	17	474032
369	25.8	5.7	7.0	chr10	72297515	72297656	(61499766)	+	MIRb	SINE/MIR	107	246	(22)	476989
19	15.1	0.0	0.0	chr10	72297844	72297880	(61499542)	+	(TCCGCC)n	Simple_repeat	1	37	(0)	476990
343	34.3	10.1	0.8	chr10	72299067	72299316	(61498106)	C	L2c	LINE/L2	(82)	3305	3030	476992
2289	10.0	2.0	0.0	chr10	73970407	73970697	(59826725)	C	AluSg	SINE/Alu	(13)	297	1	480284
3222	17.1	2.1	2.5	chr10	73970698	73971060	(59826362)	+	L1MB8	LINE/L1	5810	6173	(5)	480283
25	16.6	1.3	7.5	chr10	74825382	74825460	(58971962)	+	G-rich	Low_complexity	1	80	(0)	481941
19	15.9	3.9	1.9	chr10	74825912	74825962	(58971460)	+	G-rich	Low_complexity	1	53	(0)	481942
1235	23.2	13.1	3.3	chr10	77971356	77971810	(55825612)	+	MLT1J	LTR/ERVL-MaLR	4	509	(3)	486935
853	24.2	5.0	0.4	chr10	78974938	78975165	(54822257)	C	MIR	SINE/MIR	(21)	241	3	488807
366	28.5	13.1	2.9	chr10	79150489	79150671	(54646751)	+	MIR3	SINE/MIR	1	206	(62)	489148
15	0.0	0.0	0.0	chr10	100228977	100228993	(33568429)	+	(GC)n	Simple_repeat	1	17	(0)	522978
38	0.0	0.0	0.0	chr10	100228994	100229026	(33568396)	+	(CA)n	Simple_repeat	1	33	(0)	522979
18	28.7	1.6	1.6	chr10	100229115	100229175	(33568247)	+	(CA)n	Simple_repeat	1	62	(0)	522980
19	11.2	5.8	3.6	chr11	2885520	2885571	(132201051)	+	GA-rich	Low_complexity	1	55	(0)	576274
15	21.4	0.0	0.0	chr11	2892199	2892236	(132194386)	+	(CTGGAGC)n	Simple_repeat	1	38	(0)	576287
183	24.1	4.9	0.0	chr11	2892310	2892367	(132194255)	+	MIRc	SINE/MIR	89	149	(119)	576288
260	30.0	26.0	1.2	chr11	2898041	2898863	(132187759)	+	L2b	LINE/L2	1797	2895	(524)	576297
285	26.8	4.7	1.2	chr11	2898960	2899042	(132187580)	+	L2b	LINE/L2	3285	3370	(5)	576298
2347	11.5	0.0	0.0	chr11	3814245	3814556	(131272066)	C	AluSx1	SINE/Alu	(0)	312	1	577762
882	15.4	0.0	2.2	chr11	3814577	3814712	(131271910)	C	FLAM_C	SINE/Alu	(10)	133	1	577763
125	5.3	1.2	1.8	chr11	3814720	3814884	(131271738)	+	(TTTC)n	Simple_repeat	1	167	(0)	577764
291	24.2	10.8	0.8	chr11	9758475	9758607	(125328015)	C	MIR	SINE/MIR	(68)	194	47	586501
19	17.4	0.0	0.0	chr11	17277489	17277522	(117809100)	+	GA-rich	Low_complexity	1	34	(0)	598474
12	21.8	1.9	5.6	chr11	20387639	20387691	(114698931)	+	(TCGCGC)n	Simple_repeat	1	54	(0)	603849
2247	12.0	1.0	0.0	chr11	34964322	34964622	(100122000)	+	AluSz6	SINE/Alu	1	304	(8)	626073
13	23.0	3.2	10.2	chr11	34964781	34964904	(100121718)	+	(ATAACTA)n	Simple_repeat	1	128	(0)	626074
37	5.7	0.0	4.9	chr11	44309714	44309774	(90776848)	+	(GCGGCT)n	Simple_repeat	1	61	(0)	639876
16	16.4	0.0	0.0	chr11	45847015	45847048	(89239574)	+	(TGATGG)n	Simple_repeat	1	34	(0)	642909
198	22.7	0.0	0.0	chr11	47377801	47377844	(87708778)	C	L2b	LINE/L2	(29)	3346	3303	645778
2111	13.1	0.0	0.3	chr11	47545148	47545445	(87541177)	+	AluSx1	SINE/Alu	1	297	(15)	646125
14	12.5	0.0	0.0	chr11	58579456	58579481	(76507141)	+	(GCC)n	Simple_repeat	1	26	(0)	655688
24	13.4	4.1	0.0	chr11	61967443	61967491	(73119131)	+	(GGC)n	Simple_repeat	1	51	(0)	661187
304	27.8	11.5	0.0	chr11	62856552	62856666	(72229956)	C	MIR	SINE/MIR	(8)	254	125	662963
275	33.1	4.6	3.9	chr11	63938321	63938449	(71148173)	+	L2c	LINE/L2	3258	3387	(0)	664693
22	6.5	3.1	0.0	chr11	64885390	64885421	(70201201)	+	(AC)n	Simple_repeat	1	33	(0)	666385
857	20.5	13.2	1.0	chr11	64885422	64885613	(70201009)	+	MER20	DNA/hAT-Charlie	1	219	(0)	666386
309	28.9	36.7	0.0	chr11	64885661	64885816	(70200806)	+	MIR	SINE/MIR	2	218	(44)	666387
13	14.3	2.2	8.5	chr11	65423133	65423178	(69663444)	+	GA-rich	Low_complexity	1	47	(0)	667512
13	8.5	4.0	0.0	chr11	65500555	65500579	(69586043)	+	(GAAG)n	Simple_repeat	1	26	(0)	667664
2443	8.5	1.0	0.0	chr11	65507915	65508220	(69578402)	+	AluSp	SINE/Alu	1	309	(4)	667667
284	36.1	6.6	5.9	chr11	65889635	65890000	(69196622)	+	L2c	LINE/L2	2804	3170	(217)	668356
261	34.5	9.1	0.9	chr11	65890035	65890145	(69196477)	+	L2c	LINE/L2	3267	3387	(0)	668356
786	33.8	11.7	2.3	chr11	66256822	66257263	(68829359)	+	L3	LINE/CR1	3554	4042	(57)	669133
228	35.0	8.5	0.0	chr11	66257302	66257398	(68829224)	+	MIR	SINE/MIR	145	250	(12)	669134
408	33.0	10.9	3.6	chr11	66568707	66568847	(68517775)	C	MIR	SINE/MIR	(2)	260	97	669799
2220	12.2	0.0	0.0	chr11	66568848	66569150	(68517472)	+	AluSq2	SINE/Alu	1	303	(10)	669800
408	33.0	10.9	3.6	chr11	66569151	66569228	(68517394)	C	MIR	SINE/MIR	(166)	96	23	669799
1127	23.5	14.6	1.0	chr11	67276581	67276964	(67809658)	C	L1MB8	LINE/L1	(15)	6163	5720	671344
203	24.6	4.2	4.2	chr11	67391620	67391691	(67694931)	C	MIRc	SINE/MIR	(184)	84	13	671564
13	21.7	2.6	0.0	chr11	67391937	67391974	(67694648)	+	G-rich	Low_complexity	1	39	(0)	671565
226	30.3	0.0	0.0	chr11	67507869	67507934	(67578688)	C	MIRc	SINE/MIR	(120)	148	83	671763
304	24.3	0.0	0.9	chr11	67629552	67629665	(67456957)	C	MIRc	SINE/MIR	(71)	191	86	671999
3624	9.1	3.8	0.0	chr11	68009397	68009878	(67076744)	C	LTR2C	LTR/ERV1	(0)	501	1	672615
2450	20.2	4.5	0.0	chr11	70615287	70615737	(64470885)	+	MER70A	LTR/ERVL	1	472	(0)	677103
625	11.9	6.5	0.0	chr11	72104073	72104173	(62982449)	+	U13	snRNA	1	108	(0)	679351
382	20.8	8.4	6.5	chr11	75031831	75031969	(60054653)	C	MIR3	SINE/MIR	(9)	199	58	685220
263	29.5	12.0	1.6	chr11	75559470	75559655	(59526967)	C	L2b	LINE/L2	(21)	3354	3147	686342
675	1.3	0.0	0.0	chr11	76235513	76235587	(58851035)	+	tRNA-Pro-CCY	tRNA	1	75	(0)	687581
296	29.2	3.7	0.2	chr11	112087357	112087477	(22999145)	C	L2c	LINE/L2	(43)	3383	3242	742500
188	33.9	15.4	2.0	chr11	112087478	112087673	(22998949)	C	L2c	LINE/L2	(691)	2728	2502	742500
18	29.9	0.0	0.0	chr11	117986112	117986158	(17100464)	+	(CA)n	Simple_repeat	1	47	(0)	752104
61	0.0	1.7	0.0	chr11	118051826	118051883	(17034739)	+	(ATACTA)n	Simple_repeat	1	59	(0)	752217
208	31.6	0.0	5.0	chr11	118051932	118052011	(17034611)	+	L3	LINE/CR1	453	528	(3571)	752218
675	33.5	12.4	5.0	chr11	119120360	119121078	(15965544)	C	L2c	LINE/L2	(73)	3314	2526	754272
284	29.4	4.5	0.0	chr12	643521	643605	(132631704)	C	MIRb	SINE/MIR	(72)	196	108	779138
13	8.1	3.9	0.0	chr12	12717774	12717799	(120557510)	+	(TTTGT)n	Simple_repeat	1	27	(0)	798630
31	16.6	1.4	1.4	chr12	19439369	19439437	(113835872)	+	G-rich	Low_complexity	1	70	(0)	808198
25	22.0	1.4	2.7	chr12	19439621	19439692	(113835617)	+	GA-rich	Low_complexity	1	73	(0)	808199
19	22.1	5.1	3.6	chr12	25386118	25386196	(107889113)	+	(CGC)n	Simple_repeat	1	83	(0)	816427
2535	7.9	0.0	0.0	chr12	47215257	47215548	(86059761)	C	AluSq2	SINE/Alu	(16)	297	6	843295
11	16.5	5.9	0.0	chr12	50070709	50070742	(83204567)	+	(CCCCAG)n	Simple_repeat	1	36	(0)	848364
20	18.8	0.0	3.9	chr12	50505002	50505053	(82770256)	+	(GGC)n	Simple_repeat	1	52	(0)	849382
1384	19.7	2.7	2.3	chr12	50590017	50590275	(82685034)	C	AluJo	SINE/Alu	(29)	283	24	849579
29	12.5	1.8	1.8	chr12	50590276	50590297	(82685012)	+	(TC)n	Simple_repeat	1	22	(0)	849580
2352	10.0	0.0	0.3	chr12	50590367	50590667	(82684642)	C	AluSg	SINE/Alu	(9)	301	2	849581
2554	5.1	0.0	0.3	chr12	54315643	54315938	(78959371)	+	AluY	SINE/Alu	1	295	(16)	856237
1455	13.0	2.0	13.5	chr12	54315939	54316164	(78959145)	+	L1M4	LINE/L1	5402	5607	(573)	856234
19	27.9	2.5	2.4	chr12	56080060	56080082	(77195227)	+	(CTCC)n	Simple_repeat	1	32	(50)	858883
18	8.7	0.0	0.0	chr12	56080083	56080107	(77195202)	+	(CT)n	Simple_repeat	1	25	(0)	858884
19	27.9	2.5	2.4	chr12	56080108	56080141	(77195168)	+	(CTCC)n	Simple_repeat	33	82	(0)	858883
40	4.9	0.0	0.0	chr12	57111277	57111319	(76163990)	+	(CA)n	Simple_repeat	1	43	(0)	860714
12	18.4	5.4	0.0	chr12	57111422	57111458	(76163851)	+	GA-rich	Low_complexity	1	39	(0)	860715
15	24.6	0.0	0.0	chr12	57431143	57431185	(75844124)	+	(CGCACG)n	Simple_repeat	1	43	(0)	861303
12	31.2	0.0	0.0	chr12	57431186	57431196	(75844113)	+	(CGCA)n	Simple_repeat	1	54	(0)	861304
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
2076	25.9	10.8	4.2	chr12	69358807	69359638	(63915671)	C	HAL1	LINE/L1	(358)	2149	1234	879124
14	23.2	1.9	3.6	chr12	69359672	69359725	(63915584)	+	(GCGCGT)n	Simple_repeat	1	55	(0)	879126
181	20.7	0.0	0.0	chr12	71755952	71755980	(61519329)	+	MIR3	SINE/MIR	120	148	(60)	882814
711	21.2	9.8	1.8	chr12	71756150	71756359	(61518950)	+	MIR	SINE/MIR	6	237	(25)	882815
561	28.6	13.5	0.9	chr12	82359291	82359625	(50915684)	C	L2	LINE/L2	(357)	3062	2679	897654
783	18.6	0.8	0.0	chr12	82941186	82941309	(50334000)	C	FLAM_A	SINE/Alu	(17)	125	1	898475
1843	23.3	2.2	1.3	chr12	83253046	83253441	(50021868)	+	MER70A	LTR/ERVL	73	472	(0)	898867
13	8.1	3.6	3.5	chr12	95474285	95474312	(37800997)	+	GA-rich	Low_complexity	1	29	(0)	917299
5987	21.7	5.7	3.9	chr12	104201073	104201957	(29073352)	C	L1MA4	LINE/L1	(4319)	2246	1327	932048
20	21.4	4.9	3.5	chr12	109911187	109911267	(23364042)	+	(AGCTGG)n	Simple_repeat	1	85	(0)	943624
234	32.3	11.8	1.2	chr12	112125998	112126163	(21149146)	+	MIRb	SINE/MIR	35	220	(48)	948543
373	23.0	2.9	9.9	chr12	112418544	112418648	(20856661)	C	MIR	SINE/MIR	(110)	152	56	949169
14	25.4	3.0	4.4	chr12	112418853	112418936	(20856373)	+	(GGC)n	Simple_repeat	1	82	(0)	949170
59	15.0	7.1	3.6	chr12	117125840	117126022	(16149287)	+	(CTGTCAC)n	Simple_repeat	1	196	(0)	959618
23	9.4	0.0	7.5	chr12	122226368	122226420	(11048889)	+	(GGCGG)n	Simple_repeat	1	53	(0)	971354
15	29.9	0.0	6.1	chr12	122896049	122896130	(10379179)	+	(CCG)n	Simple_repeat	1	82	(0)	972885
21	20.4	0.0	0.0	chr12	123436354	123436401	(9838908)	+	(CCT)n	Simple_repeat	1	48	(0)	974082
29	0.0	3.2	0.0	chr12	123584561	123584591	(9690718)	+	(GCG)n	Simple_repeat	1	32	(0)	974479
587	8.3	0.0	0.0	chr12	124939966	124940037	(8335272)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	977201
1217	30.4	3.8	0.7	chr12	132268352	132268991	(1006318)	+	L1M5	LINE/L1	4946	5606	(573)	989279
14	15.0	10.9	1.6	chr13	26186524	26186578	(88177750)	+	(GCGCACA)n	Simple_repeat	1	61	(0)	1002856
188	22.2	3.6	8.5	chr13	27425339	27425397	(86938931)	C	L2a	LINE/L2	(59)	3367	3312	1004934
4433	14.7	2.8	0.4	chr13	43995229	43995933	(70368395)	C	MER50	LTR/ERV1	(12)	722	1	1029632
229	22.1	0.8	3.2	chr13	52159787	52159872	(62204456)	+	MIRc	SINE/MIR	16	102	(166)	1042687
621	25.0	11.8	6.3	chr13	52159874	52160176	(62204152)	+	MLT1D	LTR/ERVL-MaLR	1	322	(183)	1042688
4285	20.3	0.7	2.2	chr13	64074922	64075752	(50288576)	C	MER52A	LTR/ERV1	(0)	1755	937	1058100
1093	24.4	2.5	6.3	chr13	64075760	64076092	(50288236)	C	MER52A	LTR/ERV1	(1435)	320	1	1058100
5979	13.1	1.2	0.5	chr13	80515135	80516854	(33847474)	C	L1PA16	LINE/L1	(0)	6166	4436	1080432
246	34.1	5.2	0.0	chr13	80669181	80669271	(33695057)	C	MamGypLTR3	LTR/Gypsy	(201)	693	598	1080602
4232	14.6	8.2	1.8	chr13	90267912	90268643	(24095685)	C	LTR1	LTR/ERV1	(0)	783	1	1092710
199	27.1	0.0	7.8	chr13	91095215	91095278	(23269050)	C	MIR3	SINE/MIR	(39)	169	111	1093772
1137	17.2	2.7	3.4	chr13	91106204	91106468	(23257860)	+	L1MC3	LINE/L1	7516	7778	(7)	1093788
382	22.5	5.8	2.3	chr13	91106466	91106597	(23257731)	+	L1MEg	LINE/L1	3095	3231	(4319)	1093784
407	17.9	14.4	0.0	chr13	91106687	91106781	(23257547)	+	MER3	DNA/hAT-Charlie	83	193	(16)	1093789
896	10.2	0.0	6.8	chr13	91513007	91513154	(22851174)	C	L1PA10	LINE/L1	(9)	6159	6022	1094354
4343	21.0	5.4	2.5	chr13	91513157	91513354	(22850974)	C	L1MD2	LINE/L1	(9)	6350	6137	1094355
29	0.0	0.0	0.0	chr13	91513355	91513379	(22850949)	+	(TG)n	Simple_repeat	1	25	(0)	1094356
4343	21.0	5.4	2.5	chr13	91513380	91513458	(22850870)	C	L1MD2	LINE/L1	(223)	6136	6064	1094355
2283	12.2	0.0	0.0	chr13	91513459	91513752	(22850576)	+	AluSx	SINE/Alu	1	294	(18)	1094357
3055	22.9	8.2	0.9	chr13	91596419	91597272	(22767056)	C	L1MEc	LINE/L1	(5443)	957	36	1094473
2335	22.7	8.5	1.6	chr13	92332863	92333440	(22030888)	+	L1MC1	LINE/L1	1	622	(5886)	1095431
2192	16.1	6.2	7.3	chr13	92333475	92333937	(22030391)	+	L1MC1	LINE/L1	556	1004	(5504)	1095431
1398	21.5	4.3	1.4	chr13	92431969	92432327	(21932001)	+	MLT1A	LTR/ERVL-MaLR	1	370	(4)	1095559
1854	11.0	4.2	7.6	chr13	92432358	92432674	(21931654)	C	AluY	SINE/Alu	(5)	306	1	1095560
393	28.2	12.3	1.3	chr13	93222735	93222964	(21141364)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	352	1096606
261	33.8	6.6	7.0	chr13	93355643	93356157	(21008171)	C	L2c	LINE/L2	(568)	2851	2339	1096795
661	1.4	0.0	0.0	chr13	94549650	94549722	(19814606)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	1098498
2103	23.8	1.3	0.4	chr13	103297026	103297493	(11066835)	C	MER70A	LTR/ERVL	(0)	472	1	1111989
874	28.3	8.0	3.2	chr13	107903471	107903912	(6460416)	+	MLT1C	LTR/ERVL-MaLR	1	465	(2)	1118057
491	27.3	12.5	1.0	chr13	107903915	107904203	(6460125)	+	L1MD	LINE/L1	4002	4328	(1818)	1118058
13	15.6	2.0	7.8	chr13	113296931	113296980	(1067348)	+	(CTTCCT)n	Simple_repeat	1	51	(0)	1124474
12	24.3	0.0	4.3	chr13	114234973	114235019	(129309)	+	G-rich	Low_complexity	1	47	(0)	1125385
17	13.8	5.0	0.0	chr14	22886947	22886986	(84156732)	+	(CCGCC)n	Simple_repeat	1	42	(0)	1131899
13	23.5	0.0	0.0	chr14	24316281	24316315	(82727403)	+	(CCG)n	Simple_repeat	1	35	(0)	1134063
2638	15.9	6.8	1.4	chr14	73610704	73611149	(33432569)	+	MER70A	LTR/ERVL	1	472	(0)	1206669
4284	15.7	3.3	0.8	chr14	76687591	76688292	(30355426)	+	MER50	LTR/ERV1	3	722	(12)	1212769
2289	18.4	0.9	1.4	chr14	76688330	76688927	(30354791)	C	L1MD	LINE/L1	(570)	5672	5076	1212770
24	30.4	0.0	0.0	chr14	81435659	81435722	(25607996)	+	(AC)n	Simple_repeat	1	64	(0)	1220622
722	23.8	4.6	0.5	chr14	94648790	94648975	(12394743)	C	MSTB1	LTR/ERVL-MaLR	(230)	196	3	1241488
1416	13.4	0.9	1.8	chr14	94648986	94649213	(12394505)	C	MER70A	LTR/ERVL	(352)	226	1	1241487
1772	11.8	11.2	0.0	chr14	97109039	97109308	(9934410)	+	AluSx1	SINE/Alu	1	304	(8)	1246105
2095	20.4	4.2	2.8	chr14	97109309	97109693	(9934025)	+	MER70A	LTR/ERVL	83	472	(0)	1246104
27	18.8	0.0	3.1	chr14	99603435	99603498	(7440220)	+	(GCC)n	Simple_repeat	1	64	(0)	1250257
247	27.6	9.9	0.3	chr14	104729576	104729938	(2313780)	C	TAR1	Satellite/telo	(561)	1550	1149	1258758
5054	17.3	4.4	3.3	chr14	105800795	105801280	(1242438)	+	L1MC2	LINE/L1	5834	6334	(10)	1260022
2405	7.5	0.0	0.3	chr14	105801500	105801794	(1241924)	C	AluSc	SINE/Alu	(14)	295	2	1260027
1233	14.9	23.0	2.7	chr15	27088488	27088824	(74902365)	C	MSTA	LTR/ERVL-MaLR	(0)	428	3	1272242
6872	18.7	4.6	7.1	chr15	28284948	28286647	(73704542)	+	L1MDa	LINE/L1	2773	4419	(2118)	1273604
2479	19.5	1.5	2.1	chr15	35914552	35915023	(66076166)	+	MER70A	LTR/ERVL	4	472	(0)	1284994
1817	19.9	8.3	2.7	chr15	40130969	40133678	(61857511)	+	SATR1	Satellite	1	2860	(43)	1290729
12	26.4	0.0	5.5	chr15	40323531	40323585	(61667604)	+	(GGCTCCC)n	Simple_repeat	1	55	(0)	1291015
14	13.1	0.0	0.0	chr15	41231305	41231330	(60759859)	+	(CCCT)n	Simple_repeat	1	26	(0)	1292845
2566	6.3	0.0	0.0	chr15	41402729	41403029	(60588160)	C	AluSg	SINE/Alu	(9)	301	1	1293269
14	23.4	3.4	3.3	chr15	43133895	43133953	(58857236)	+	(GCCCGC)n	Simple_repeat	1	61	(0)	1296448
1476	20.6	0.7	6.2	chr15	50678748	50678884	(51312305)	+	AluJb	SINE/Alu	1	133	(179)	1308275
2344	7.7	0.0	0.3	chr15	50678885	50679171	(51312018)	C	AluSc	SINE/Alu	(23)	286	1	1308276
13	30.4	4.4	0.0	chr15	51622857	51622924	(50368265)	+	(GAGC)n	Simple_repeat	1	71	(0)	1309765
14	14.8	1.9	9.1	chr15	52568729	52568782	(49422407)	+	(GCCTCG)n	Simple_repeat	1	55	(0)	1311518
21	12.6	0.0	0.0	chr15	56733492	56733527	(45257662)	+	(GAG)n	Simple_repeat	1	36	(0)	1317505
12	14.1	3.0	2.9	chr15	56733745	56733777	(45257412)	+	(GCCAGG)n	Simple_repeat	1	34	(0)	1317506
2059	16.8	0.0	1.9	chr15	57321215	57321530	(44669659)	+	AluJb	SINE/Alu	1	310	(2)	1318499
61	0.0	0.0	0.0	chr15	60398784	60398835	(41592354)	+	(GT)n	Simple_repeat	1	52	(0)	1323707
41	2.4	2.3	0.0	chr15	60398892	60398934	(41592255)	+	(GT)n	Simple_repeat	1	44	(0)	1323707
14	16.8	4.7	2.2	chr15	63870827	63870869	(38120320)	+	(CTCAGAG)n	Simple_repeat	1	45	(0)	1329297
348	25.9	13.5	2.5	chr15	63870875	63871033	(38120156)	C	MIRc	SINE/MIR	(25)	183	6	1329298
1686	14.7	3.8	1.1	chr15	65105034	65105189	(36886000)	+	AluJr	SINE/Alu	135	293	(19)	1331894
1855	16.2	0.0	2.6	chr15	65105193	65105495	(36885694)	+	AluJb	SINE/Alu	1	295	(17)	1331896
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
706	12.5	0.0	1.8	chr15	65305005	65305116	(36686073)	+	AluSz	SINE/Alu	1	110	(202)	1332346
246	19.7	1.5	7.0	chr15	67820833	67820903	(34170286)	+	MIRb	SINE/MIR	122	188	(80)	1337182
324	30.0	10.4	3.7	chr15	70100887	70101073	(31890116)	C	MIRb	SINE/MIR	(20)	248	48	1341467
31	24.4	2.6	6.4	chr15	72319943	72320095	(29671094)	+	G-rich	Low_complexity	1	157	(0)	1345247
951	24.8	9.7	5.6	chr15	74889338	74889909	(27101280)	+	L2a	LINE/L2	2817	3426	(0)	1349709
248	17.6	3.8	0.0	chr15	74995227	74995277	(26995912)	C	MIRc	SINE/MIR	(97)	171	119	1349978
1555	17.3	8.4	0.0	chr15	75627635	75627905	(26363284)	+	AluJb	SINE/Alu	1	296	(16)	1351241
13	17.6	0.0	2.9	chr15	76338004	76338037	(25653152)	+	G-rich	Low_complexity	1	34	(0)	1352424
2614	18.9	0.4	6.6	chr15	81046264	81046639	(20944550)	C	MER70A	LTR/ERVL	(0)	472	103	1360600
1897	17.1	0.0	2.2	chr15	81046640	81046955	(20944234)	+	AluJr4	SINE/Alu	2	310	(2)	1360601
476	27.7	8.6	4.9	chr15	84653768	84653991	(17337198)	+	MIRb	SINE/MIR	8	240	(28)	1366350
2228	4.2	4.7	1.4	chr15	90901351	90901639	(11089550)	+	L1PA8	LINE/L1	5866	6164	(8)	1377330
456	31.5	5.6	4.5	chr15	90901701	90901818	(11089371)	+	L1ME4c	LINE/L1	282	409	(421)	1377331
1708	17.4	4.4	1.4	chr15	90901819	90902167	(11089022)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	5	1377332
49	19.0	0.0	4.8	chr15	96066968	96067092	(5924097)	+	(ATA)n	Simple_repeat	1	125	(0)	1385330
267	32.1	19.8	1.1	chr15	96067093	96067288	(5923901)	C	MIRb	SINE/MIR	(4)	258	29	1385331
244	26.5	8.4	0.0	chr15	101295783	101295880	(695309)	C	L1ME3	LINE/L1	(19)	6154	6048	1392606
2554	8.7	0.0	0.0	chr16	52165	52476	(90285869)	+	AluSx1	SINE/Alu	1	312	(0)	1394119
2551	4.2	1.9	1.0	chr16	52488	52795	(90285550)	+	AluY	SINE/Alu	1	311	(0)	1394120
602	11.0	0.0	0.0	chr16	424832	424913	(89913432)	C	AluJo	SINE/Alu	(185)	127	46	1394749
18	26.1	0.0	8.3	chr16	1379275	1379370	(88958975)	+	(GCCCC)n	Simple_repeat	1	96	(0)	1395811
12	18.6	6.7	2.1	chr16	1474877	1474921	(88863424)	+	(CCG)n	Simple_repeat	1	48	(0)	1395967
2223	8.6	0.0	1.4	chr16	1679774	1680065	(88658280)	+	AluYm1	SINE/Alu	1	288	(23)	1396241
11	9.5	11.8	0.0	chr16	1992691	1992724	(88345621)	+	(GCGCACG)n	Simple_repeat	1	38	(0)	1396754
212	26.2	10.4	5.5	chr16	2009003	2009111	(88329234)	C	MIR1_Amn	SINE/MIR	(62)	168	54	1396769
13	21.0	0.0	4.8	chr16	2715458	2715499	(87622846)	+	(GTGG)n	Simple_repeat	1	42	(0)	1397799
2512	18.6	5.7	1.2	chr16	3149106	3149611	(87188734)	C	LTR53B	LTR/ERVL	(0)	533	4	1398594
252	27.5	5.9	0.0	chr16	3149957	3150036	(87188309)	+	MIRb	SINE/MIR	155	239	(29)	1398595
217	31.4	14.5	5.0	chr16	3264843	3265003	(87073342)	C	L2a	LINE/L2	(1)	3425	3208	1398855
18	19.7	2.7	6.7	chr16	3717380	3717452	(86620893)	+	(GCCC)n	Simple_repeat	1	75	(0)	1399696
12	22.3	0.0	7.4	chr16	3717424	3717477	(86620868)	+	(CCGGCG)n	Simple_repeat	1	54	(0)	1399697
239	34.2	3.3	5.7	chr16	4314633	4314756	(86023589)	C	L2b	LINE/L2	(26)	3349	3229	1400930
1894	14.7	1.6	4.5	chr16	11246411	11246724	(79091621)	C	AluJb	SINE/Alu	(7)	305	1	1415225
301	22.4	5.2	7.4	chr16	11246725	11246846	(79091499)	C	MIRb	SINE/MIR	(57)	211	82	1415224
2846	16.2	2.1	0.0	chr16	13359767	13360228	(76978117)	C	MER70A	LTR/ERVL	(0)	472	1	1419933
751	15.3	0.8	0.0	chr16	14634547	14634670	(75703675)	+	FLAM_C	SINE/Alu	1	125	(18)	1422542
3728	8.1	11.1	1.7	chr16	20747061	20747599	(69590746)	+	LTR4	LTR/ERV1	1	596	(0)	1436402
526	30.5	12.7	4.2	chr16	20789176	20789411	(69548934)	+	MIR	SINE/MIR	1	259	(3)	1436492
260	31.9	8.6	2.4	chr16	20789415	20789578	(69548767)	+	Charlie15a	DNA/hAT-Charlie	47	221	(3)	1436493
14	21.5	2.2	2.2	chr16	22206227	22206271	(68132074)	+	(CGCCC)n	Simple_repeat	1	46	(0)	1439529
705	26.9	4.4	0.0	chr16	28303994	28304209	(62034136)	+	L1ME4b	LINE/L1	315	540	(352)	1453146
586	21.0	12.7	1.1	chr16	28304396	28304576	(62033769)	+	MIRb	SINE/MIR	20	225	(43)	1453147
15	8.9	0.0	0.0	chr16	28823492	28823515	(61514830)	+	(CGC)n	Simple_repeat	1	24	(0)	1454526
26	0.0	0.0	0.0	chr16	28863894	28863918	(61474427)	+	(GCC)n	Simple_repeat	1	25	(0)	1454616
11	9.7	8.6	2.6	chr16	28879981	28880015	(61458330)	+	(GCCCCT)n	Simple_repeat	1	38	(0)	1454637
28	0.0	3.3	0.0	chr16	28925338	28925367	(61412978)	+	(CCCCGG)n	Simple_repeat	1	31	(0)	1454764
664	21.1	4.9	5.5	chr16	29009896	29010060	(61328285)	C	MIRb	SINE/MIR	(76)	192	29	1454974
215	27.7	15.1	1.0	chr16	29791036	29791137	(60547208)	+	MIR1_Amn	SINE/MIR	39	157	(73)	1456580
15	27.4	2.9	2.8	chr16	29807510	29807578	(60530767)	+	(GCG)n	Simple_repeat	1	71	(0)	1456611
13	23.5	0.0	0.0	chr16	29900111	29900145	(60438200)	+	(GCCCG)n	Simple_repeat	1	35	(0)	1456817
16	16.9	0.0	0.0	chr16	29900223	29900255	(60438090)	+	(CCGA)n	Simple_repeat	1	33	(0)	1456818
277	25.0	6.7	0.0	chr16	29925497	29925580	(60412765)	+	MIR	SINE/MIR	170	259	(3)	1456867
13	25.3	2.0	2.0	chr16	30585555	30585603	(59752742)	+	G-rich	Low_complexity	1	50	(0)	1458400
24	24.8	4.8	2.7	chr16	30894116	30894220	(59444125)	+	(CCGGC)n	Simple_repeat	1	110	(0)	1459123
250	26.2	0.0	3.2	chr16	30894500	30894562	(59443783)	C	L2c	LINE/L2	(0)	3387	3327	1459124
284	18.6	7.8	0.0	chr16	31075023	31075081	(59263264)	+	MIRb	SINE/MIR	177	240	(28)	1459563
439	22.6	0.0	0.0	chr16	31443281	31443364	(58894981)	C	MER96B	DNA/hAT-Tip100	(3)	414	331	1460322
14	22.5	0.0	0.0	chr16	53434604	53434654	(36903691)	+	GA-rich	Low_complexity	1	51	(0)	1477845
12	28.7	0.0	2.1	chr16	56194521	56194568	(34143777)	+	(GGCTC)n	Simple_repeat	1	48	(0)	1482665
358	19.7	10.2	0.8	chr16	57300190	57300285	(33038060)	+	AluJb	SINE/Alu	209	293	(9)	1484767
625	8.4	0.0	0.0	chr16	57300480	57300562	(33037783)	C	tRNA-Leu-CTG	tRNA	(3)	83	1	1484768
18	17.6	0.0	0.0	chr16	58734013	58734044	(31604301)	+	(GT)n	Simple_repeat	1	32	(0)	1487741
15	17.2	2.4	2.4	chr16	66552529	66552569	(23785776)	+	(GCGCGT)n	Simple_repeat	1	42	(0)	1499952
352	29.9	14.3	1.4	chr16	66905692	66905837	(23432508)	C	MIRb	SINE/MIR	(14)	254	87	1500661
870	16.1	0.0	0.0	chr16	66906074	66906197	(23432148)	C	AluJr	SINE/Alu	(188)	124	1	1500662
251	30.8	7.1	0.0	chr16	67185693	67185770	(23152575)	+	MIR3	SINE/MIR	64	147	(61)	1501229
1938	17.1	3.2	3.0	chr16	67481516	67482239	(22856106)	+	MER51C	LTR/ERV1	1	640	(0)	1501694
482	27.7	7.6	4.2	chr16	67561309	67561523	(22776822)	+	Charlie8	DNA/hAT-Charlie	1	223	(2205)	1501888
12	27.1	0.0	3.9	chr16	68264971	68265022	(22073323)	+	(TGTGAC)n	Simple_repeat	1	52	(0)	1503254
16	17.3	8.1	3.0	chr16	70251620	70251681	(20086664)	+	(CCG)n	Simple_repeat	1	67	(0)	1507543
2261	17.9	5.1	4.3	chr16	71198405	71198872	(19139473)	+	MER70A	LTR/ERVL	1	472	(0)	1509265
16	0.0	0.0	0.0	chr16	71467961	71467977	(18870368)	+	(G)n	Simple_repeat	1	17	(0)	1509741
2183	10.9	1.0	0.0	chr16	71468075	71468359	(18869986)	C	AluSq2	SINE/Alu	(25)	288	1	1509742
2455	18.9	4.6	1.3	chr16	74836235	74836606	(15501739)	+	MER70B	LTR/ERVL	1	391	(187)	1515539
2292	10.5	0.0	2.0	chr16	74836607	74836912	(15501433)	+	AluSx1	SINE/Alu	1	300	(12)	1515540
379	29.3	4.1	1.7	chr16	84592951	84593068	(5745277)	C	MIRc	SINE/MIR	(7)	261	141	1533160
199	30.1	10.8	0.0	chr16	84699454	84699536	(5638809)	+	L2a	LINE/L2	3333	3425	(1)	1533428
2088	12.5	0.0	1.6	chr16	85141376	85141512	(5196833)	C	AluSx	SINE/Alu	(179)	133	1	1534268
348	21.9	10.2	1.6	chr16	85550089	85550213	(4788132)	C	MIRb	SINE/MIR	(94)	174	38	1535046
839	26.3	8.1	0.9	chr16	85550224	85550453	(4787892)	+	MIR	SINE/MIR	15	262	(0)	1535047
180	41.9	4.7	4.7	chr16	85570736	85570993	(4767352)	C	L2c	LINE/L2	(18)	3369	3112	1535078
15	10.2	9.1	2.1	chr16	85799767	85799810	(4538535)	+	(GGCCG)n	Simple_repeat	1	48	(0)	1535469
11	10.6	0.0	10.5	chr16	87317335	87317372	(3020973)	+	(AACCC)n	Simple_repeat	1	38	(0)	1538230
13	4.7	0.0	4.2	chr16	87317392	87317415	(3020930)	+	(CGCC)n	Simple_repeat	1	24	(0)	1538231
180	37.2	4.0	1.6	chr16	88491392	88491514	(1846831)	C	MIRb	SINE/MIR	(79)	189	64	1540026
182	28.4	3.8	3.8	chr16	88560987	88561092	(1777253)	C	MIR3	SINE/MIR	(13)	195	90	1540120
580	16.7	0.0	0.0	chr16	89926575	89926670	(411675)	C	AluSx3	SINE/Alu	(13)	298	203	1542090
15	12.8	2.8	2.7	chr17	7916266	7916301	(75341140)	+	G-rich	Low_complexity	1	37	(0)	1559740
34	13.2	0.0	0.0	chr17	18184331	18184388	(65073053)	+	(GCCGCC)n	Simple_repeat	1	58	(0)	1578112
321	29.7	8.9	1.1	chr17	27091114	27091300	(56166141)	+	REP522	Satellite/telo	1027	1229	(588)	1586175
25	29.4	1.6	4.0	chr17	27091732	27091855	(56165586)	+	(TTCTTT)n	Simple_repeat	1	126	(0)	1586176
13	15.2	0.0	3.2	chr17	28744082	28744112	(54513329)	+	(CCCG)n	Simple_repeat	1	31	(0)	1589232
13	25.4	3.0	4.4	chr17	28902918	28902983	(54354458)	+	(CCCCGCG)n	Simple_repeat	1	68	(0)	1589592
224	37.7	9.7	2.4	chr17	38474294	38474826	(44782615)	C	L2	LINE/L2	(691)	2728	2153	1607928
1929	13.8	0.3	6.9	chr17	39959275	39959420	(43298021)	+	AluJo	SINE/Alu	1	143	(169)	1611080
680	25.3	1.7	0.6	chr17	43367908	43368082	(39889359)	C	U2	snRNA	(6)	182	6	1617635
23	16.1	4.5	2.9	chr17	43938408	43938473	(39318968)	+	GA-rich	Low_complexity	1	69	(0)	1618888
1625	21.4	1.2	1.2	chr17	50013064	50013385	(33244056)	+	MER70B	LTR/ERVL	3	324	(254)	1630990
2289	9.9	0.0	3.0	chr17	50013397	50013699	(33243742)	C	AluY	SINE/Alu	(17)	294	1	1630991
14	17.1	1.6	9.4	chr17	50866466	50866528	(32390913)	+	(CCCCGG)n	Simple_repeat	1	64	(0)	1632611
773	17.7	0.7	0.7	chr17	55264555	55264696	(27992745)	C	MER5B	DNA/hAT-Charlie	(7)	171	30	1639346
16	0.0	0.0	0.0	chr17	55264749	55264765	(27992676)	+	(A)n	Simple_repeat	1	17	(0)	1639347
11	36.9	0.0	0.0	chr17	58331488	58331541	(24925900)	+	(CCCCCT)n	Simple_repeat	1	54	(0)	1644828
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
292	31.7	1.1	4.7	chr17	59107090	59107281	(24150160)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	1646446
208	18.8	4.1	0.0	chr17	59565188	59565236	(23692205)	+	MIRc	SINE/MIR	61	108	(100)	1647535
2263	7.3	0.0	0.4	chr17	59842395	59842669	(23414772)	+	AluSx	SINE/Alu	1	274	(38)	1648068
33	0.0	0.0	2.8	chr17	63522999	63523034	(19734407)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1654861
23	28.3	3.8	1.8	chr17	63523162	63523267	(19734174)	+	GA-rich	Low_complexity	1	110	(0)	1654862
12	18.8	2.6	2.6	chr17	64146158	64146195	(19111246)	+	G-rich	Low_complexity	1	39	(0)	1656000
385	27.0	19.5	2.7	chr17	64369378	64369560	(18887881)	C	MIR	SINE/MIR	(25)	237	17	1656429
15	28.8	1.9	6.5	chr17	64975604	64975708	(18281733)	+	(ACGCC)n	Simple_repeat	1	107	(0)	1657692
23	14.6	4.7	3.0	chr17	67245234	67245297	(16012144)	+	(CCTCCCG)n	Simple_repeat	1	67	(0)	1661589
15	20.2	0.0	6.7	chr17	74852344	74852388	(8405053)	+	(CG)n	Simple_repeat	1	45	(0)	1674875
11	21.2	2.5	2.4	chr17	74852554	74852593	(8404848)	+	(GCAGCT)n	Simple_repeat	1	41	(0)	1674876
12	8.1	3.6	3.5	chr17	74852615	74852642	(8404799)	+	G-rich	Low_complexity	1	29	(0)	1674877
976	20.3	13.5	0.7	chr17	74961051	74961257	(8296184)	+	MER33	DNA/hAT-Charlie	1	224	(100)	1675068
214	28.3	8.6	6.1	chr17	74973340	74973509	(8283932)	C	L2b	LINE/L2	(0)	3387	3214	1675088
261	32.0	11.0	0.0	chr17	74981871	74981967	(8275474)	+	L3b	LINE/CR1	4954	5062	(170)	1675116
491	30.8	8.6	4.2	chr17	75111848	75112259	(8145182)	C	L2a	LINE/L2	(2)	3424	2882	1675371
437	17.2	13.0	0.0	chr17	75112311	75112397	(8145044)	+	AluJo	SINE/Alu	150	249	(63)	1675372
194	30.8	11.7	1.1	chr17	75262043	75262134	(7995307)	+	MIRc	SINE/MIR	3	105	(163)	1675711
3278	14.0	4.8	0.5	chr17	75347185	75347743	(7909698)	+	LTR27C	LTR/ERV1	1	584	(183)	1675913
33	10.4	0.0	0.0	chr17	76072415	76072467	(7184974)	+	(CCG)n	Simple_repeat	1	53	(0)	1677337
202	29.8	4.0	4.8	chr17	76557890	76558010	(6699431)	+	MIR	SINE/MIR	96	216	(52)	1678274
21	33.7	2.4	2.3	chr17	76736257	76736383	(6521058)	+	G-rich	Low_complexity	1	130	(0)	1678635
21	19.0	0.0	0.0	chr17	77320871	77320908	(5936533)	+	(GT)n	Simple_repeat	1	38	(0)	1679876
2372	6.2	3.6	0.0	chr17	77321397	77321687	(5935754)	C	AluY	SINE/Alu	(9)	302	1	1679877
1906	13.6	4.4	0.3	chr17	79294313	79294598	(3962843)	C	AluSx1	SINE/Alu	(13)	299	2	1683246
266	27.7	0.0	10.5	chr17	81020138	81020211	(2237230)	C	L2	LINE/L2	(1004)	2415	2345	1685794
406	26.6	0.0	1.7	chr17	81472162	81472276	(1785165)	+	MLT1K	LTR/ERVL-MaLR	153	265	(330)	1686275
1203	7.5	0.0	0.0	chr17	81711642	81711827	(1545614)	C	AluSx	SINE/Alu	(0)	312	136	1686674
2322	9.4	0.7	0.0	chr17	81892525	81892822	(1364619)	C	AluSx	SINE/Alu	(12)	300	1	1686881
1059	15.8	4.2	4.7	chr17	81892859	81893012	(1364429)	C	AluJb	SINE/Alu	(13)	299	141	1686882
1834	10.1	8.3	0.8	chr17	81893013	81893149	(1364292)	C	AluSz	SINE/Alu	(14)	298	142	1686883
1909	9.9	0.0	0.0	chr17	81893150	81893391	(1364050)	C	AluSx3	SINE/Alu	(69)	242	1	1686884
986	8.1	0.0	0.0	chr18	158118	158240	(80215045)	C	AluJb	SINE/Alu	(12)	300	178	1689318
22	24.0	2.6	2.5	chr18	158379	158406	(80214879)	+	(CCCT)n	Simple_repeat	1	77	(0)	1689319
13	19.1	0.0	6.4	chr18	158407	158453	(80214832)	+	(CCCTCCA)n	Simple_repeat	1	47	(0)	1689320
26	27.5	3.3	3.2	chr18	158579	158698	(80214587)	+	(GCC)n	Simple_repeat	1	124	(0)	1689321
802	29.4	9.0	8.3	chr18	519540	520069	(79853216)	C	L1MEi	LINE/L1	(1539)	673	128	1689922
12	11.0	6.7	6.2	chr18	657966	658010	(79715275)	+	G-rich	Low_complexity	1	48	(0)	1690194
1379	20.2	1.2	1.2	chr18	2544850	2545170	(77828115)	C	MER33	DNA/hAT-Charlie	(1)	323	3	1692853
315	32.2	8.9	1.1	chr18	2545477	2545652	(77827633)	C	MamRep605	LTR?	(121)	728	538	1692854
2107	9.3	3.4	1.4	chr18	3606843	3607132	(76766153)	C	AluSq	SINE/Alu	(17)	296	1	1694739
1454	15.0	13.7	1.1	chr18	3607191	3607457	(76765828)	C	AluJr	SINE/Alu	(6)	306	1	1694740
2860	18.5	2.5	0.2	chr18	22675001	22675461	(57697824)	+	MER70A	LTR/ERVL	1	472	(0)	1714862
1626	23.8	4.3	3.8	chr18	22675462	22675834	(57697451)	+	MER110A	LTR/ERV1	140	491	(0)	1714861
491	22.4	11.2	2.0	chr18	26089740	26089885	(54283400)	+	L2c	LINE/L2	3227	3387	(0)	1720303
12	15.2	2.4	7.0	chr18	26090392	26090433	(54282852)	+	(GGCCC)n	Simple_repeat	1	43	(0)	1720304
2328	4.3	1.5	0.0	chr18	35240456	35240713	(45132572)	C	AluY	SINE/Alu	(8)	303	42	1733038
2172	11.5	4.7	2.0	chr18	77993550	77993903	(2379382)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1794143
27	19.2	5.9	3.7	chr19	344864	344965	(58272651)	+	G-rich	Low_complexity	1	108	(0)	1796772
229	31.4	12.3	0.8	chr19	345134	345255	(58272361)	C	MIRb	SINE/MIR	(107)	161	24	1796773
12	11.9	0.0	6.5	chr19	917936	917966	(57699650)	+	(GCGG)n	Simple_repeat	1	31	(0)	1797888
233	24.6	1.6	0.0	chr19	923991	924051	(57693565)	C	MIR1_Amn	SINE/MIR	(70)	160	99	1797900
239	29.6	9.1	0.6	chr19	1508661	1508757	(57108859)	C	MIR3	SINE/MIR	(85)	123	28	1798899
30	0.0	0.0	0.0	chr19	1508780	1508807	(57108809)	+	(CATT)n	Simple_repeat	1	28	(0)	1798900
221	28.8	5.2	0.0	chr19	1508853	1508925	(57108691)	C	L2a	LINE/L2	(2)	3424	3348	1798901
2286	10.2	0.0	3.1	chr19	1508963	1509284	(57108332)	+	AluSx1	SINE/Alu	1	312	(0)	1798902
1333	18.4	0.0	3.8	chr19	1897956	1898194	(56719422)	+	AluJo	SINE/Alu	82	311	(1)	1799709
732	18.6	1.8	1.8	chr19	2740424	2740587	(55877029)	+	L1MA8	LINE/L1	6029	6192	(99)	1801562
2682	2.9	0.7	0.3	chr19	2900006	2900314	(55717302)	+	AluY	SINE/Alu	1	310	(1)	1801886
2356	18.9	4.7	0.0	chr19	3568810	3569254	(55048362)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	1803553
44	4.1	2.0	0.0	chr19	3569255	3569304	(55048312)	+	(GT)n	Simple_repeat	1	51	(0)	1803554
267	25.6	3.5	0.0	chr19	4173320	4173409	(54444207)	C	MIR3	SINE/MIR	(53)	155	64	1804947
397	32.2	4.5	9.4	chr19	4968110	4968342	(53649274)	C	MIRb	SINE/MIR	(21)	247	27	1806998
19	21.2	0.0	0.0	chr19	5341053	5341096	(53276520)	+	(GGC)n	Simple_repeat	1	44	(0)	1807707
361	22.7	13.1	0.2	chr19	5803483	5803618	(52813998)	C	MIR	SINE/MIR	(15)	253	81	1808886
192	13.4	3.3	3.5	chr19	6717444	6717863	(51899753)	+	(GTGTGTT)n	Simple_repeat	1	434	(0)	1810986
33	8.1	4.3	2.7	chr19	6717893	6717962	(51899654)	+	(TG)n	Simple_repeat	1	73	(0)	1810987
12	33.2	0.0	3.0	chr19	6717980	6718046	(51899570)	+	(TCTCTG)n	Simple_repeat	1	67	(0)	1810988
1352	18.6	4.3	0.1	chr19	7562695	7562974	(51054642)	C	L1MC2	LINE/L1	(514)	5830	5540	1813209
205	39.7	2.3	0.8	chr19	7563149	7563275	(51054341)	+	L2c	LINE/L2	2911	3039	(348)	1813212
1095	4.9	0.0	6.2	chr19	7942927	7943070	(50674546)	+	AluSq2	SINE/Alu	179	313	(0)	1814011
1858	6.0	0.0	0.0	chr19	8051166	8051383	(50566233)	+	AluYk3	SINE/Alu	83	300	(11)	1814270
255	32.3	5.7	2.0	chr19	10270728	10270828	(48346788)	+	MIR	SINE/MIR	117	221	(41)	1819334
215	32.5	6.6	2.6	chr19	10836752	10836868	(47780748)	+	MIR	SINE/MIR	112	233	(29)	1820785
1707	17.6	0.3	3.2	chr19	11096001	11096312	(47521304)	+	AluJb	SINE/Alu	1	303	(9)	1821415
1850	20.9	11.8	4.5	chr19	11096393	11096899	(47520717)	C	MLT1F1	LTR/ERVL-MaLR	(8)	561	13	1821416
1295	21.2	7.8	1.7	chr19	11597922	11598250	(47019366)	C	MER57E3	LTR/ERV1	(1)	486	138	1822765
13	3.1	15.2	0.0	chr19	12801855	12801887	(45815729)	+	(CGGAG)n	Simple_repeat	1	38	(0)	1825239
343	4.4	0.0	0.0	chr19	12884797	12884841	(45732775)	C	LTR7B	LTR/ERV1	(0)	464	420	1825448
449	15.3	0.0	1.2	chr19	12885149	12885234	(45732382)	+	MER96	DNA/hAT-Tip100	3	87	(88)	1825449
254	23.3	4.0	0.0	chr19	14005528	14005600	(44612016)	C	MIR1_Amn	SINE/MIR	(62)	168	93	1828310
12	18.1	0.0	3.0	chr19	17605990	17606050	(41011566)	+	(GCCCC)n	Simple_repeat	1	59	(0)	1836812
218	32.5	19.1	1.7	chr19	18239368	18239539	(40378077)	+	MIR	SINE/MIR	15	223	(45)	1838438
1696	12.3	0.0	0.0	chr19	18239744	18239970	(40377646)	+	AluSz	SINE/Alu	1	227	(85)	1838439
16	13.4	0.0	2.9	chr19	18280050	18280084	(40337532)	+	A-rich	Low_complexity	1	35	(0)	1838526
11	16.9	2.9	2.8	chr19	18388462	18388496	(40229120)	+	(GCGCCT)n	Simple_repeat	1	36	(0)	1838793
20	24.7	1.8	0.0	chr19	18419440	18419496	(40198120)	+	(GCC)n	Simple_repeat	1	58	(0)	1838870
13	19.8	0.0	2.7	chr19	18419535	18419571	(40198045)	+	G-rich	Low_complexity	1	37	(0)	1838871
12	17.4	0.0	8.7	chr19	18588917	18588962	(40028654)	+	G-rich	Low_complexity	1	46	(0)	1839178
960	16.2	4.1	11.3	chr19	19866348	19866501	(38751115)	C	LTR10B1	LTR/ERV1	(0)	547	410	1841743
889	27.7	4.7	1.3	chr19	28574716	28574959	(30042657)	+	HAL1	LINE/L1	1548	1799	(708)	1848991
444	31.3	3.5	1.8	chr19	28574976	28575141	(30042475)	C	LTR16C	LTR/ERVL	(0)	489	321	1848993
12	13.4	4.2	8.0	chr19	32692415	32692462	(25925154)	+	(CCTGG)n	Simple_repeat	1	50	(0)	1855321
12	23.8	2.2	2.1	chr19	34134452	34134497	(24483119)	+	G-rich	Low_complexity	1	47	(0)	1857971
1270	20.8	1.2	4.8	chr19	35828564	35828827	(22788789)	+	MER58B	DNA/hAT-Charlie	85	339	(2)	1861260
690	27.6	14.6	1.1	chr19	36488420	36488852	(22128764)	+	L1ME3D	LINE/L1	5490	5990	(252)	1862646
15	27.1	2.2	6.5	chr19	36489006	36489096	(22128520)	+	(CAGTCA)n	Simple_repeat	1	93	(0)	1862647
1326	22.2	6.4	10.2	chr19	38507940	38508197	(20109419)	C	L2a	LINE/L2	(17)	3409	3181	1866813
1862	11.5	0.0	0.0	chr19	39205264	39205506	(19412110)	+	AluSz	SINE/Alu	1	243	(69)	1868523
248	36.5	14.1	1.6	chr19	39340884	39341633	(19275983)	+	L2	LINE/L2	2092	2950	(469)	1868894
15	8.6	7.7	2.4	chr19	39342130	39342180	(19275436)	+	(CGCCC)n	Simple_repeat	1	53	(0)	1868895
13	29.6	0.0	0.0	chr19	40425604	40425648	(18191968)	+	(CGG)n	Simple_repeat	1	45	(0)	1871022
2325	6.2	2.7	0.0	chr19	40434442	40434729	(18182887)	C	AluSg	SINE/Alu	(14)	296	1	1871052
2094	12.2	0.0	0.0	chr19	40434732	40435019	(18182597)	C	AluSq2	SINE/Alu	(21)	292	5	1871053
397	32.2	6.5	7.8	chr19	40751530	40751903	(17865713)	+	L2b	LINE/L2	2957	3325	(50)	1871866
490	24.7	4.1	6.9	chr19	40751935	40752051	(17865565)	C	MIR	SINE/MIR	(29)	233	124	1871867
2599	5.8	0.0	0.0	chr19	41262758	41263068	(17354548)	+	AluSq	SINE/Alu	1	311	(2)	1873026
647	30.0	10.5	5.1	chr19	42140487	42140837	(16476779)	+	L2b	LINE/L2	3004	3375	(0)	1874665
182	32.8	1.7	0.0	chr19	42243680	42243737	(16373879)	+	X9_LINE	LINE/L1	286	344	(592)	1874874
2392	7.0	0.0	0.7	chr19	42243744	42244041	(16373575)	+	AluSq2	SINE/Alu	1	296	(17)	1874875
12	8.4	0.0	6.9	chr19	43774647	43774675	(14842941)	+	(GGTCA)n	Simple_repeat	1	29	(0)	1877645
17	17.2	0.0	2.4	chr19	43774730	43774779	(14842837)	+	GA-rich	Low_complexity	1	48	(0)	1877646
445	24.7	23.8	1.7	chr19	43788874	43789108	(14828508)	+	L2a	LINE/L2	3121	3423	(3)	1877678
18	8.5	0.0	0.0	chr19	45039357	45039381	(13578235)	+	(A)n	Simple_repeat	1	25	(0)	1880309
2179	8.3	0.0	1.1	chr19	45631915	45632192	(12985424)	C	AluSg	SINE/Alu	(35)	275	1	1881845
2005	9.4	4.4	1.4	chr19	45632193	45632478	(12985138)	C	AluSz	SINE/Alu	(17)	295	1	1881846
2360	10.1	0.0	1.3	chr19	45863559	45863874	(12753742)	C	AluSz	SINE/Alu	(0)	312	1	1882443
213	26.0	6.5	2.5	chr19	45883360	45883459	(12734157)	+	MIRc	SINE/MIR	60	166	(64)	1882485
537	26.3	11.1	4.1	chr19	47244835	47245076	(11372540)	C	L2a	LINE/L2	(0)	3426	3166	1885634
2162	15.1	0.0	0.0	chr19	47245088	47245365	(11372251)	+	AluSz	SINE/Alu	2	279	(33)	1885635
2447	9.2	0.0	0.0	chr19	47277191	47277495	(11340121)	C	AluSx1	SINE/Alu	(7)	305	1	1885720
1710	12.8	0.7	15.1	chr19	47277496	47277662	(11339954)	C	AluSx1	SINE/Alu	(184)	128	1	1885718
798	27.2	4.1	0.9	chr19	47277663	47277765	(11339851)	+	MIR	SINE/MIR	116	223	(39)	1885717
1757	16.7	1.4	1.1	chr19	48825308	48825588	(9792028)	C	AluJo	SINE/Alu	(8)	304	23	1889708
435	26.6	6.7	4.8	chr19	48825601	48825746	(9791870)	C	MIRb	SINE/MIR	(48)	220	72	1889709
716	18.0	1.4	1.6	chr19	48836592	48837072	(9780544)	+	MSR1	Satellite	1	480	(0)	1889739
298	21.0	6.9	1.2	chr19	48872685	48872766	(9744850)	C	MSR1	Satellite	(18)	93	7	1889835
410	31.6	4.9	8.1	chr19	49671791	49672110	(8945506)	+	L2a	LINE/L2	3061	3369	(57)	1891659
197	35.4	2.6	4.2	chr19	49672139	49672256	(8945360)	+	MIRb	SINE/MIR	82	197	(71)	1891660
207	25.8	3.1	1.6	chr19	51607907	51607969	(7009647)	+	MIR3	SINE/MIR	86	149	(59)	1895888
238	25.5	1.0	0.5	chr19	54096199	54096810	(4520806)	+	(CTCT)n	Simple_repeat	1	618	(0)	1901067
1633	24.6	4.7	3.0	chr19	54812120	54812489	(3805127)	C	MER70B	LTR/ERVL	(99)	479	96	1902342
2106	18.5	1.2	2.5	chr19	54812490	54812927	(3804689)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	1902343
22	23.9	3.5	0.0	chr19	55180268	55180324	(3437292)	+	(GT)n	Simple_repeat	1	59	(0)	1903171
536	19.0	11.4	8.7	chr19	55639911	55640049	(2977567)	C	MER3	DNA/hAT-Charlie	(56)	153	2	1904215
13	22.0	2.7	0.0	chr19	55640125	55640161	(2977455)	+	(GCT)n	Simple_repeat	1	38	(0)	1904217
2161	13.3	0.3	0.0	chr19	58317302	58317601	(300015)	+	AluSq2	SINE/Alu	1	301	(12)	1909320
230	23.6	1.8	0.0	chr19	58317645	58317699	(299917)	+	MER3	DNA/hAT-Charlie	16	71	(138)	1909321
525	27.7	0.7	0.0	chr19	58317700	58317840	(299776)	C	MER3	DNA/hAT-Charlie	(54)	155	14	1909305
13	20.0	2.4	2.3	chr2	9207633	9207674	(232985855)	+	(AGCTCCG)n	Simple_repeat	1	43	(0)	1922562
31	2.8	2.7	0.0	chr2	9556318	9556354	(232637175)	+	(CCCCGAG)n	Simple_repeat	1	38	(0)	1923168
296	31.9	0.1	2.4	chr2	10029930	10030080	(232163449)	C	MIRc	SINE/MIR	(53)	215	63	1924039
399	11.5	14.5	6.2	chr2	10120423	10120535	(232072994)	+	FLAM_C	SINE/Alu	12	135	(8)	1924224
2045	19.2	8.7	1.4	chr2	11011316	11011752	(231181777)	+	MER70A	LTR/ERVL	1	472	(0)	1925872
346	23.9	4.4	2.5	chr2	11747131	11747266	(230446263)	C	MIRb	SINE/MIR	(124)	144	4	1927198
3591	24.0	7.5	3.6	chr2	13460843	13462583	(228730946)	+	L1MC3	LINE/L1	848	2941	(56)	1929842
8787	21.9	7.6	6.3	chr2	13462702	13464008	(228729521)	+	L1MC3	LINE/L1	2778	4192	(2372)	1929842
2538	19.8	3.6	3.6	chr2	14937288	14937759	(227255770)	C	MER70A	LTR/ERVL	(0)	472	1	1931933
1078	5.5	0.0	0.0	chr2	27753208	27753334	(214440195)	C	AluYc	SINE/Alu	(14)	285	159	1952424
908	32.6	5.5	4.2	chr2	27753343	27753791	(214439738)	+	L2b	LINE/L2	2920	3374	(1)	1952425
16	22.7	3.5	1.7	chr2	32011040	32011097	(210182432)	+	(GGCGCAG)n	Simple_repeat	1	60	(0)	1959290
310	33.8	11.7	4.1	chr2	37196705	37197019	(204996510)	C	L1M4b	LINE/L1	(6274)	593	252	1967324
1851	27.6	14.3	3.7	chr2	37592798	37593467	(204600062)	C	HAL1b	LINE/L1	(374)	2047	1287	1967976
253	27.9	16.5	0.0	chr2	38523760	38523845	(203669684)	+	L3b	LINE/CR1	4991	5093	(139)	1969403
308	33.3	6.6	0.5	chr2	42196054	42196162	(199997367)	+	MIRb	SINE/MIR	8	130	(138)	1975127
192	22.0	10.6	4.8	chr2	46941842	46941903	(195251626)	+	Tigger19a	DNA/TcMar-Tigger	153	218	(105)	1983106
2426	20.7	1.7	0.2	chr2	67958439	67958907	(174234622)	C	MER70B	LTR/ERVL	(102)	476	1	2014821
37	28.6	1.1	5.4	chr2	70087465	70087646	(172105883)	+	(CCCGCC)n	Simple_repeat	1	184	(0)	2018348
1555	21.4	8.5	4.5	chr2	71041305	71042427	(171151102)	C	SATR1	Satellite	(84)	1161	1	2020022
64	27.1	3.0	5.3	chr2	71042460	71042790	(171150739)	+	(TAATAT)n	Simple_repeat	1	341	(0)	2020023
14	8.4	0.0	3.7	chr2	74958682	74958708	(167234821)	+	(GGC)n	Simple_repeat	1	27	(0)	2026250
5007	19.6	9.5	6.7	chr2	81481148	81482372	(160711157)	C	LTR2752	LTR/ERV1	(0)	1263	1	2035101
27	3.5	0.0	0.0	chr2	85336349	85336378	(156857151)	+	(T)n	Simple_repeat	1	30	(0)	2040553
1594	13.3	0.0	6.7	chr2	85336384	85336638	(156856891)	C	AluJr	SINE/Alu	(74)	238	1	2040554
14	20.6	2.6	0.0	chr2	85418152	85418190	(156775339)	+	(CCTGG)n	Simple_repeat	1	40	(0)	2040719
923	20.9	0.0	1.6	chr2	88016358	88016547	(154176982)	C	U2	snRNA	(1)	187	1	2045132
14	18.3	2.7	0.0	chr2	102736724	102736760	(139456769)	+	(TCCTGTC)n	Simple_repeat	1	38	(0)	2061466
606	24.4	1.7	5.4	chr2	105338024	105338209	(136855320)	C	MIR3	SINE/MIR	(9)	199	21	2064785
2221	9.7	1.6	0.3	chr2	108718345	108718644	(133474885)	C	AluSx1	SINE/Alu	(7)	305	2	2069691
793	14.9	15.9	8.6	chr2	108718645	108718706	(133474823)	+	MER8	DNA/TcMar-Tigger	183	239	(0)	2069690
2196	7.9	3.7	1.0	chr2	108718776	108719065	(133474464)	C	AluSc8	SINE/Alu	(13)	298	1	2069692
51	3.8	0.0	0.0	chr2	111120967	111121021	(131072508)	+	(CGC)n	Simple_repeat	1	55	(0)	2073128
2652	15.3	1.7	0.4	chr2	111638555	111639019	(130554510)	C	L1MB3	LINE/L1	(0)	6183	5713	2073796
2763	4.4	0.0	0.0	chr2	121531314	121531609	(120661920)	+	AluYe5	SINE/Alu	1	296	(14)	2088813
736	30.4	8.0	7.8	chr2	155318378	155318976	(86874553)	C	L1ME3A	LINE/L1	(241)	5932	5333	2136047
230	37.3	2.0	4.5	chr2	155318988	155319144	(86874385)	C	L2	LINE/L2	(905)	2514	2362	2136048
657	1.4	0.0	0.0	chr2	156401147	156401217	(85792312)	C	tRNA-Gly-GGY	tRNA	(3)	71	1	2137396
2015	19.6	9.8	2.5	chr2	158877536	158879364	(83314165)	C	SATR1	Satellite	(301)	1963	1	2140721
14	13.1	9.5	0.0	chr2	168456095	168456136	(73737393)	+	(TGCGCCC)n	Simple_repeat	1	46	(0)	2153583
13	13.1	13.3	1.5	chr2	169824904	169824963	(72368566)	+	(GCGCGCAC)n	Simple_repeat	1	68	(0)	2155676
16	19.5	1.9	7.3	chr2	172000139	172000192	(70193337)	+	(AC)n	Simple_repeat	1	55	(0)	2159420
14	20.2	4.3	2.0	chr2	173354872	173354918	(68838611)	+	(GCT)n	Simple_repeat	1	49	(0)	2161545
18	31.8	0.0	0.0	chr2	174336898	174336959	(67856570)	+	(CGC)n	Simple_repeat	1	62	(0)	2163103
15	15.1	2.6	2.5	chr2	177213180	177213218	(64980311)	+	G-rich	Low_complexity	1	40	(0)	2167293
1835	9.1	0.4	3.6	chr2	178413242	178413494	(63780035)	C	AluSp	SINE/Alu	(67)	246	2	2169048
1140	18.4	6.7	9.6	chr2	178523762	178524116	(63669413)	+	LTR16A1	LTR/ERVL	112	455	(1)	2169227
16	15.2	2.0	6.0	chr2	183038554	183038602	(59154927)	+	(GGCCCT)n	Simple_repeat	1	50	(0)	2174825
182	22.5	0.0	0.0	chr2	183039052	183039091	(59154438)	+	L2c	LINE/L2	3341	3380	(7)	2174826
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
302	35.9	2.0	6.2	chr2	196068201	196068411	(46125118)	C	MIRc	SINE/MIR	(63)	205	4	2191849
2136	20.6	5.8	0.7	chr2	200165693	200166137	(42027392)	+	MER70B	LTR/ERVL	1	469	(109)	2197920
17	14.2	0.0	0.0	chr2	216372298	216372328	(25821201)	+	(CCG)n	Simple_repeat	1	31	(0)	2222623
761	16.5	4.0	0.9	chr2	238880042	238881652	(3311877)	+	(TTAGTA)n	Simple_repeat	1	1676	(0)	2258347
13	10.0	5.9	2.8	chr2	238881656	238881689	(3311840)	+	(GGCTG)n	Simple_repeat	1	36	(0)	2258348
210	32.3	13.8	1.5	chr20	266606	266941	(64177226)	C	L2a	LINE/L2	(133)	3293	2910	2262508
243	29.7	8.9	1.6	chr20	290034	290158	(64154009)	C	MIR3	SINE/MIR	(60)	170	43	2262570
13	24.2	1.9	3.8	chr20	324509	324560	(64119607)	+	(CGCCC)n	Simple_repeat	1	53	(0)	2262662
770	22.8	15.0	8.8	chr20	341740	342198	(64101969)	+	MLT1G	LTR/ERVL-MaLR	16	490	(65)	2262711
13	23.8	2.2	2.1	chr20	3820503	3820548	(60623619)	+	(GCGC)n	Simple_repeat	1	47	(0)	2269563
16	8.1	10.3	0.0	chr20	4221630	4221668	(60222499)	+	(CTGCGCG)n	Simple_repeat	1	43	(0)	2270389
13	26.5	1.6	4.6	chr20	10219528	10219591	(54224576)	+	G-rich	Low_complexity	1	65	(0)	2280188
18	19.5	2.7	6.7	chr20	10219592	10219597	(54224570)	+	(GCGG)n	Simple_repeat	4	75	(0)	2280189
360	21.0	0.3	5.2	chr20	32208212	32208327	(32235840)	C	MIR3	SINE/MIR	(25)	183	78	2307886
263	20.0	1.6	0.0	chr20	32208325	32208384	(32235783)	C	L3	LINE/CR1	(1202)	2897	2837	2307887
787	25.0	2.3	7.3	chr20	32208387	32208534	(32235633)	C	L2a	LINE/L2	(1)	3425	3276	2307888
13	12.1	5.0	4.8	chr20	35601756	35601795	(28842372)	+	G-rich	Low_complexity	1	42	(0)	2315649
337	30.6	0.8	4.6	chr20	36460801	36460930	(27983237)	C	MIRb	SINE/MIR	(102)	166	42	2317682
17	26.8	1.4	4.1	chr20	36461263	36461334	(27982833)	+	(GGCC)n	Simple_repeat	1	73	(0)	2317683
224	20.8	4.0	0.0	chr20	37627081	37627128	(26817039)	+	MIR3	SINE/MIR	152	201	(7)	2320432
18	23.8	0.0	2.0	chr20	38926649	38926699	(25517468)	+	(GCG)n	Simple_repeat	1	51	(0)	2323167
528	27.2	2.5	12.4	chr20	43525356	43525573	(20918594)	C	MER91A	DNA/hAT-Tip100	(0)	196	1	2331373
226	28.2	5.3	0.0	chr20	45972689	45972785	(18471382)	C	MIR3	SINE/MIR	(97)	171	63	2336666
19	3.7	0.0	3.3	chr20	47196941	47196970	(17247197)	+	(GTTG)n	Simple_repeat	1	30	(0)	2339458
1902	12.7	4.2	0.7	chr20	47196971	47197245	(17246922)	C	AluJb	SINE/Alu	(27)	285	1	2339459
397	29.9	4.5	9.3	chr20	49982121	49982378	(14461789)	+	L2b	LINE/L2	3130	3374	(1)	2345773
257	29.4	15.1	1.2	chr20	50071597	50071761	(14372406)	C	MIRb	SINE/MIR	(0)	268	77	2346022
191	32.0	8.1	2.3	chr20	50154234	50154361	(14289806)	C	L2b	LINE/L2	(29)	3346	3211	2346211
12	13.2	5.7	2.7	chr20	62805784	62805818	(1638349)	+	(GCAGG)n	Simple_repeat	1	37	(0)	2368973
12	20.8	3.6	5.3	chr20	62805930	62805984	(1638183)	+	(CCTGCCT)n	Simple_repeat	1	57	(0)	2368974
81	21.6	1.4	3.2	chr20	63653429	63653646	(790521)	+	G-rich	Low_complexity	1	221	(0)	2369848
1850	15.7	2.0	2.7	chr20	63869843	63870142	(574025)	+	AluJb	SINE/Alu	1	298	(14)	2370158
28	0.0	0.0	0.0	chr20	64255724	64255749	(188418)	+	(GGC)n	Simple_repeat	1	26	(0)	2370630
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
6271	20.2	7.0	7.7	chr21	10412525	10414341	(36295642)	+	REP522	Satellite/telo	14	1817	(0)	2375506
1924	16.9	0.0	0.3	chr21	14544054	14544348	(32165635)	C	AluJb	SINE/Alu	(16)	296	3	2377978
2544	17.8	3.8	3.4	chr21	26689886	26690115	(20019868)	+	MER70A	LTR/ERVL	1	225	(247)	2394348
2256	8.2	0.0	0.0	chr21	26690116	26690384	(20019599)	+	AluSx1	SINE/Alu	2	270	(42)	2394349
24	15.8	1.7	3.3	chr21	28885363	28885422	(17824561)	+	(CATGCG)n	Simple_repeat	1	61	(0)	2397390
14	15.6	3.4	8.2	chr21	31659922	31659980	(15050003)	+	(GCCCG)n	Simple_repeat	1	61	(0)	2401850
152	2.8	0.0	0.0	chr21	32771844	32771990	(13937993)	+	(GA)n	Simple_repeat	1	147	(0)	2403728
1478	22.3	12.1	8.2	chr21	36990585	36991247	(9718736)	C	MER21C	LTR/ERVL	(130)	808	18	2410806
2558	8.0	1.9	1.3	chr21	38120579	38120889	(8589094)	+	AluSq2	SINE/Alu	1	313	(0)	2412610
2035	18.1	2.3	6.1	chr21	38120890	38120935	(8589048)	C	MLT2C1	LTR/ERVL	(352)	45	3	2412609
15	0.0	0.0	0.0	chr21	38120985	38121001	(8588982)	+	(AC)n	Simple_repeat	1	17	(0)	2412611
677	16.3	3.6	1.5	chr21	38121047	38121183	(8588800)	C	LTR16A	LTR/ERVL	(8)	443	304	2412612
2018	19.8	3.8	0.7	chr21	38121187	38121599	(8588384)	C	LTR9	LTR/ERV1	(0)	612	187	2412613
14	0.0	0.0	4.5	chr21	39313516	39313537	(7396446)	+	(GAGC)n	Simple_repeat	1	22	(0)	2414334
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
1966	12.3	0.3	3.9	chr21	43659016	43659324	(3050659)	+	AluJr	SINE/Alu	1	298	(14)	2420579
13	0.0	0.0	4.8	chr21	43659537	43659557	(3050426)	+	(CCG)n	Simple_repeat	1	21	(0)	2420580
225	31.5	5.3	2.7	chr21	46323406	46323552	(386431)	C	MER4E	LTR/ERV1	(153)	613	463	2423810
1610	16.9	8.3	2.1	chr21	46472033	46472359	(237624)	+	MLT1B	LTR/ERVL-MaLR	35	383	(7)	2424006
188	23.3	0.0	2.3	chr21	46472412	46472455	(237528)	C	L2c	LINE/L2	(88)	3299	3257	2424007
20	27.8	1.4	0.0	chr22	16602359	16602427	(34216041)	+	(CCCGCCC)n	Simple_repeat	1	70	(0)	2427587
2088	7.7	6.5	0.3	chr22	17627980	17628265	(33190203)	C	AluSx	SINE/Alu	(7)	305	1	2429397
671	12.2	0.0	0.0	chr22	18999605	18999694	(31818774)	+	AluSz	SINE/Alu	1	90	(222)	2431287
1468	10.0	11.9	0.0	chr22	18999750	19000000	(31818468)	C	Tigger1	DNA/TcMar-Tigger	(981)	1437	1153	2431288
329	31.9	1.1	7.6	chr22	19049426	19049545	(31768923)	+	L1MD1	LINE/L1	1270	1379	(6584)	2431352
2383	9.9	0.0	0.0	chr22	19049546	19049847	(31768621)	+	AluSz6	SINE/Alu	2	303	(9)	2431353
3580	17.7	4.3	3.2	chr22	19109050	19109781	(31708687)	+	L1MB2	LINE/L1	5402	6145	(26)	2431458
2301	17.3	8.8	3.1	chr22	19277678	19278155	(31540313)	C	MER21C	LTR/ERVL	(4)	934	427	2431715
2225	10.9	0.3	0.0	chr22	19284379	19284671	(31533797)	+	AluSq2	SINE/Alu	1	294	(19)	2431729
72	16.6	2.3	3.4	chr22	19291736	19291908	(31526560)	+	(TGCCCC)n	Simple_repeat	1	177	(0)	2431743
501	22.5	6.3	8.8	chr22	19292177	19292501	(31525967)	+	Tigger3	DNA/TcMar-Tigger	5	322	(26)	2431744
2117	13.3	0.0	0.0	chr22	19337799	19338091	(31480377)	C	AluSx1	SINE/Alu	(19)	293	1	2431842
8765	10.7	5.2	0.8	chr22	19338092	19339352	(31479116)	+	L1PBa	LINE/L1	2419	3984	(2878)	2431840
327	28.4	12.9	1.3	chr22	19347201	19347425	(31471043)	+	L1MEh	LINE/L1	806	1060	(1405)	2431855
2432	7.2	1.0	0.0	chr22	19575996	19576288	(31242180)	+	AluY	SINE/Alu	1	296	(15)	2432248
2052	11.8	3.7	0.3	chr22	19576302	19576590	(31241878)	+	AluSz	SINE/Alu	1	299	(13)	2432249
1893	10.0	0.0	0.0	chr22	19616915	19617173	(31201295)	C	AluSx	SINE/Alu	(53)	259	1	2432320
564	22.9	4.8	0.0	chr22	19617174	19617330	(31201138)	C	L1M3	LINE/L1	(864)	5276	5112	2432317
3369	17.4	4.3	6.9	chr22	19677145	19677784	(31140684)	+	L1MB3	LINE/L1	5493	6140	(43)	2432416
2230	9.0	0.7	2.7	chr22	19677785	19678085	(31140383)	+	AluY	SINE/Alu	1	295	(16)	2432418
734	29.5	3.7	10.2	chr22	19832331	19832612	(30985856)	+	L1MC5a	LINE/L1	537	792	(5841)	2432584
4349	27.1	11.6	2.5	chr22	19832579	19833424	(30985044)	+	L1MEf	LINE/L1	520	1419	(5221)	2432586
1109	23.4	12.0	0.5	chr22	20317875	20318265	(30500203)	+	L1M5	LINE/L1	3548	3989	(2157)	2433104
312	32.8	9.4	2.9	chr22	20318294	20318572	(30499896)	+	L1MC5a	LINE/L1	2120	2418	(359)	2433105
1627	16.9	2.1	7.1	chr22	20377753	20378060	(30440408)	+	AluSx1	SINE/Alu	2	293	(19)	2433199
875	14.4	0.0	0.0	chr22	20465803	20465941	(30352527)	C	AluSq	SINE/Alu	(0)	313	175	2433357
319	11.1	0.0	0.0	chr22	20465954	20466006	(30352462)	+	MIRc	SINE/MIR	104	156	(106)	2433358
2428	6.8	0.0	0.0	chr22	20466094	20466400	(30352068)	+	AluSg	SINE/Alu	1	307	(3)	2433359
2104	10.4	0.3	1.0	chr22	20475565	20475861	(30342607)	C	AluSg	SINE/Alu	(15)	295	1	2433378
318	34.1	10.0	2.2	chr22	20475916	20476191	(30342277)	C	L1M5	LINE/L1	(1439)	4707	4408	2433377
905	27.2	5.4	6.1	chr22	20522031	20522359	(30296109)	C	L1ME3	LINE/L1	(339)	5823	5488	2433481
204	22.6	1.9	1.9	chr22	20522360	20522413	(30296055)	+	MER5A	DNA/hAT-Charlie	125	178	(11)	2433486
12	15.4	8.9	2.0	chr22	20522432	20522476	(30295992)	+	GA-rich	Low_complexity	1	49	(0)	2433487
2004	12.1	1.0	0.3	chr22	20538694	20539000	(30279468)	C	AluSq	SINE/Alu	(4)	309	1	2433516
3506	17.8	4.2	7.7	chr22	20539001	20539094	(30279374)	C	L1MB8	LINE/L1	(279)	5899	5833	2433513
2052	11.4	0.0	3.8	chr22	20539095	20539410	(30279058)	C	AluSx	SINE/Alu	(8)	304	1	2433517
1840	13.9	0.0	0.3	chr22	20555736	20556022	(30262446)	C	AluJb	SINE/Alu	(26)	286	1	2433542
1506	25.6	7.6	7.7	chr22	20556600	20557103	(30261365)	C	L1MD2	LINE/L1	(182)	6177	5662	2433543
1699	13.3	5.4	0.4	chr22	20656294	20656572	(30161896)	C	HERV35I-int	LTR/ERV1	(4087)	2831	2538	2433708
4081	18.4	3.8	12.4	chr22	20656630	20658936	(30159532)	C	REP522	Satellite/telo	(147)	2107	1	2433709
6603	25.2	3.9	8.7	chr22	20662206	20662754	(30155714)	C	L1M1	LINE/L1	(4350)	3215	2676	2433710
2273	11.6	0.3	0.3	chr22	20662755	20663056	(30155412)	C	AluSq	SINE/Alu	(11)	302	1	2433712
19378	12.9	2.7	2.0	chr22	20828853	20830758	(29987710)	C	L1PA15	LINE/L1	(2182)	4584	2664	2434005
618	23.6	13.4	0.6	chr22	20836180	20836354	(29982114)	+	MLT1G1	LTR/ERVL-MaLR	377	577	(2)	2434021
2044	14.9	1.0	1.9	chr22	20909753	20910067	(29908401)	+	AluJo	SINE/Alu	1	312	(0)	2434198
1264	18.6	5.2	7.5	chr22	20910068	20910184	(29908284)	+	Cheshire	DNA/hAT-Charlie	701	830	(1590)	2434196
645	24.1	2.9	2.3	chr22	20910178	20910350	(29908118)	+	Cheshire	DNA/hAT-Charlie	924	1097	(1323)	2434199
1799	16.7	0.0	1.7	chr22	20935874	20936166	(29882302)	+	AluSz	SINE/Alu	2	289	(23)	2434271
506	5.7	0.0	0.0	chr22	20946645	20946714	(29871754)	+	U3	snRNA	1	70	(147)	2434296
1013	17.4	0.0	0.0	chr22	20960462	20960616	(29857852)	+	FRAM	SINE/Alu	2	156	(20)	2434331
2449	8.6	0.3	0.0	chr22	20960884	20961186	(29857282)	+	AluSp	SINE/Alu	3	306	(7)	2434332
1958	18.2	6.8	1.8	chr22	21037711	21038101	(29780367)	C	LTR24	LTR/ERV1	(33)	434	17	2434434
2040	13.7	0.3	0.0	chr22	21038102	21038393	(29780075)	+	AluJr	SINE/Alu	9	301	(11)	2434436
2305	10.8	0.0	0.3	chr22	21039509	21039813	(29778655)	+	AluSc	SINE/Alu	1	304	(5)	2434440
2477	25.8	5.6	4.6	chr22	21039814	21040313	(29778155)	+	MER34-int	LTR/ERV1	1247	1754	(6453)	2434437
2108	14.9	0.0	0.0	chr22	21056221	21056516	(29761952)	+	AluSz	SINE/Alu	2	297	(15)	2434468
7419	8.6	1.4	0.2	chr22	21093340	21094329	(29724139)	+	LTR5B	LTR/ERVK	1	1002	(0)	2434551
1863	14.2	0.3	1.0	chr22	21566304	21566599	(29251869)	+	AluJo	SINE/Alu	3	296	(16)	2435439
364	30.5	12.9	5.0	chr22	21566600	21566848	(29251620)	+	L2b	LINE/L2	2822	3122	(253)	2435437
2251	8.9	0.0	0.3	chr22	21569113	21569415	(29249053)	+	AluSz	SINE/Alu	1	302	(10)	2435444
381	26.5	20.6	0.5	chr22	21569715	21569900	(29248568)	C	MIRb	SINE/MIR	(0)	268	36	2435445
1734	12.9	2.1	1.1	chr22	21604219	21604504	(29213964)	+	AluSz	SINE/Alu	2	290	(22)	2435516
1587	12.5	0.0	8.3	chr22	21605186	21605473	(29212995)	C	AluSc8	SINE/Alu	(4)	307	44	2435518
2228	12.8	0.0	0.0	chr22	21605493	21605805	(29212663)	C	AluSq2	SINE/Alu	(0)	313	1	2435519
228	19.6	1.9	0.0	chr22	21776355	21776405	(29042063)	C	Charlie1b	DNA/hAT-Charlie	(0)	523	472	2435856
616	30.1	13.2	0.5	chr22	21776418	21776820	(29041648)	C	Charlie1a	DNA/hAT-Charlie	(986)	469	14	2435857
1112	11.7	0.0	0.0	chr22	21783030	21783174	(29035294)	C	AluSx1	SINE/Alu	(39)	273	129	2435877
2231	9.2	0.0	0.3	chr22	21783180	21783471	(29034997)	C	AluYc	SINE/Alu	(8)	291	1	2435878
1757	15.8	0.4	0.7	chr22	21783472	21783743	(29034725)	+	AluJb	SINE/Alu	24	294	(18)	2435879
1582	15.7	0.3	11.6	chr22	21785299	21785635	(29032833)	+	AluJb	SINE/Alu	1	299	(13)	2435884
2556	7.7	0.0	0.0	chr22	21785653	21785963	(29032505)	+	AluY	SINE/Alu	1	311	(0)	2435885
2350	9.1	0.0	0.7	chr22	21789044	21789341	(29029127)	+	AluSx1	SINE/Alu	1	296	(16)	2435892
2190	8.7	1.4	0.0	chr22	21815076	21815361	(29003107)	C	AluSx3	SINE/Alu	(21)	290	1	2435955
1396	17.9	10.2	1.1	chr22	21815363	21815630	(29002838)	C	AluJb	SINE/Alu	(17)	295	1	2435956
18	13.7	2.3	2.3	chr22	21815707	21815728	(29002740)	+	(AAT)n	Simple_repeat	1	22	(0)	2435957
2688	16.9	8.8	1.8	chr22	21841172	21841733	(28976735)	+	L1MC3	LINE/L1	6790	7394	(391)	2436021
1010	17.5	0.0	2.8	chr22	21841734	21841910	(28976558)	+	AluJo	SINE/Alu	136	307	(5)	2436022
474	15.9	11.1	0.0	chr22	21846057	21846144	(28972324)	C	L2a	LINE/L2	(8)	3418	3320	2436034
2490	15.5	7.5	1.4	chr22	22075808	22076387	(28742081)	C	MER4B	LTR/ERV1	(0)	900	1	2436443
2374	9.7	0.0	0.3	chr22	22078785	22079095	(28739373)	+	AluY	SINE/Alu	1	310	(1)	2436447
588	26.3	3.6	3.5	chr22	22091390	22091644	(28726824)	+	MLT1A0	LTR/ERVL-MaLR	1	320	(76)	2436463
2074	15.4	0.0	0.6	chr22	22091647	22091957	(28726511)	+	AluJb	SINE/Alu	1	309	(3)	2436464
546	28.8	0.0	0.0	chr22	22099970	22100101	(28718367)	+	FLAM_C	SINE/Alu	2	133	(10)	2436476
274	19.7	2.9	0.0	chr22	22143819	22143884	(28674584)	+	UCON35	Unknown	1	68	(63)	2436530
264	32.3	3.6	8.0	chr22	22143961	22144135	(28674333)	+	MIRc	SINE/MIR	87	253	(15)	2436531
19782	11.8	0.5	4.8	chr22	22331690	22336920	(28481548)	+	L1PA8	LINE/L1	1189	6155	(17)	2436767
37	2.6	0.0	0.0	chr22	22336921	22336959	(28481509)	+	(AAAT)n	Simple_repeat	1	39	(0)	2436768
3323	16.3	0.6	5.8	chr22	22336967	22337049	(28481419)	+	L1MB3	LINE/L1	4244	4325	(1821)	2436766
561	25.9	0.0	1.5	chr22	22337050	22337184	(28481284)	+	FLAM_C	SINE/Alu	1	133	(10)	2436769
3939	20.3	5.3	5.8	chr22	22337185	22338915	(28479553)	+	L1MB3	LINE/L1	4326	6014	(169)	2436766
297	27.6	2.6	6.8	chr22	22351106	22351268	(28467200)	+	L1MC5	LINE/L1	9129	9284	(20)	2436781
3765	20.1	2.9	2.0	chr22	22463622	22464929	(28353539)	C	HUERS-P3-int	LTR/ERV1	(7513)	1406	1	2436873
1479	22.5	1.5	3.3	chr22	22493887	22494222	(28324246)	+	MLT1A	LTR/ERVL-MaLR	1	330	(44)	2436933
249	25.7	10.6	1.0	chr22	22524194	22524295	(28294173)	C	L1MC4	LINE/L1	(974)	7068	6956	2437000
1545	15.2	0.3	12.7	chr22	22541246	22541395	(28277073)	C	AluJo	SINE/Alu	(182)	130	1	2437049
551	30.4	8.1	7.8	chr22	22541396	22541554	(28276914)	+	Charlie25	DNA/hAT-Charlie	1963	2106	(418)	2437048
2285	19.0	3.7	8.0	chr22	22541583	22541622	(28276846)	C	Ricksha_c	DNA/MULE-MuDR	(1151)	897	861	2437051
28	7.9	0.0	0.0	chr22	22541623	22541662	(28276806)	+	(ATAG)n	Simple_repeat	1	40	(0)	2437052
2493	6.7	0.7	0.0	chr22	22541663	22541961	(28276507)	+	AluY	SINE/Alu	1	301	(10)	2437053
16	0.0	11.4	2.6	chr22	22566878	22566912	(28251556)	+	(TCCTCT)n	Simple_repeat	1	39	(0)	2437088
807	10.5	0.0	0.0	chr22	22566960	22567064	(28251404)	C	MLT1A0	LTR/ERVL-MaLR	(251)	114	10	2437089
1617	16.9	0.4	1.1	chr22	22839702	22839968	(27978500)	C	AluJb	SINE/Alu	(36)	276	12	2437458
902	28.2	8.0	3.0	chr22	22840002	22840813	(27977655)	+	L1MEc	LINE/L1	1530	2494	(4231)	2437456
4528	12.7	2.2	1.6	chr22	23002659	23003348	(27815120)	+	MER50B	LTR/ERV1	4	697	(0)	2437633
1888	11.5	0.0	0.0	chr22	23017916	23018167	(27800301)	+	AluSx3	SINE/Alu	44	295	(16)	2437660
956	25.4	11.7	3.8	chr22	23018168	23018491	(27799977)	+	L1M5	LINE/L1	5361	5717	(477)	2437659
1539	16.3	2.1	3.5	chr22	23019445	23019733	(27798735)	C	AluJb	SINE/Alu	(11)	301	17	2437664
1147	32.5	6.7	6.6	chr22	23019734	23019965	(27798503)	+	L1MEd	LINE/L1	343	575	(6511)	2437662
2234	9.2	0.0	0.3	chr22	23019966	23020249	(27798219)	+	AluSc	SINE/Alu	1	283	(26)	2437665
2050	12.8	0.0	0.0	chr22	23025746	23026019	(27792449)	C	AluSz	SINE/Alu	(38)	274	1	2437675
10727	11.9	5.2	6.6	chr22	23026020	23026083	(27792385)	+	MER4B-int	LTR/ERV1	3062	3414	(3344)	2437673
5220	22.4	6.3	9.9	chr22	23026084	23026412	(27792056)	+	MER21-int	LTR/ERVL	117	396	(3795)	2437676
197	36.4	2.5	4.8	chr22	30634405	30634528	(20183940)	C	MER5A	DNA/hAT-Charlie	(0)	189	69	2453062
16	7.8	0.0	3.5	chr22	30802854	30802882	(20015586)	+	(GGCG)n	Simple_repeat	1	29	(0)	2453437
21	17.4	2.2	0.0	chr22	30803073	30803118	(20015350)	+	(GCG)n	Simple_repeat	1	47	(0)	2453438
16	4.3	0.0	3.9	chr22	38824868	38824893	(11993575)	+	(CTC)n	Simple_repeat	1	26	(0)	2470347
2448	7.0	0.3	0.0	chr22	39293097	39293397	(11525071)	+	AluSx4	SINE/Alu	4	305	(5)	2471310
392	30.9	5.7	0.7	chr22	44685008	44685157	(6133311)	+	MIRb	SINE/MIR	21	178	(90)	2482426
3191	21.2	8.5	1.3	chr22	49807163	49808710	(1009758)	+	L1MB3	LINE/L1	4524	6179	(4)	2489759
13	0.0	4.3	4.2	chr3	4467162	4467184	(193828375)	+	(CAG)n	Simple_repeat	1	24	(0)	2499047
470	27.8	7.1	7.5	chr3	4994622	4994889	(193300670)	+	MamTip1	DNA/hAT-Tip100	1	267	(0)	2499923
17902	12.8	3.9	2.6	chr3	6704891	6705697	(191589862)	+	L1PA15	LINE/L1	5891	6689	(3)	2502621
320	30.4	3.4	10.5	chr3	9362688	9362878	(188932681)	+	MIRb	SINE/MIR	83	259	(9)	2507068
209	36.7	2.4	0.0	chr3	9363318	9363437	(188932122)	+	MIR3	SINE/MIR	34	156	(52)	2507069
394	24.6	7.2	2.7	chr3	9891094	9891239	(188404320)	+	MIRb	SINE/MIR	87	239	(29)	2508189
274	28.3	3.3	1.2	chr3	10027159	10027244	(188268315)	C	L2c	LINE/L2	(38)	3388	3275	2508501
284	34.1	9.3	2.3	chr3	10027298	10027426	(188268133)	C	L2c	LINE/L2	(219)	3168	3030	2508501
227	25.0	5.0	0.0	chr3	10142262	10142337	(188153222)	C	MIRc	SINE/MIR	(121)	147	68	2508745
2638	5.2	0.0	0.0	chr3	10142339	10142643	(188152916)	C	AluSg	SINE/Alu	(5)	305	1	2508746
408	22.2	7.9	4.1	chr3	10320587	10320708	(187974851)	+	MIR	SINE/MIR	50	176	(86)	2509187
252	27.9	0.0	0.0	chr3	12994636	12994703	(185300856)	C	MIRc	SINE/MIR	(118)	150	83	2514433
13	8.1	3.6	3.5	chr3	14178454	14178481	(184117078)	+	(CCT)n	Simple_repeat	1	29	(0)	2516418
1873	18.0	5.5	4.4	chr3	15268714	15269074	(183026485)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	2518463
249	27.1	8.3	2.5	chr3	16265718	16265842	(182029717)	C	MIR	SINE/MIR	(90)	178	34	2520244
982	32.8	6.9	1.9	chr3	17730256	17730736	(180564823)	+	MLT1G1	LTR/ERVL-MaLR	73	579	(0)	2522279
243	26.7	0.0	0.0	chr3	17730740	17730784	(180564775)	+	L2a	LINE/L2	3342	3386	(40)	2522280
22	7.3	7.0	0.0	chr3	17730901	17730969	(180564590)	+	(TAATTCA)n	Simple_repeat	1	73	(0)	2522281
312	29.1	9.0	6.5	chr3	17742106	17742322	(180553237)	+	L1MDb	LINE/L1	537	759	(5650)	2522303
18	6.4	2.7	5.3	chr3	17742520	17742559	(180553000)	+	(TCC)n	Simple_repeat	1	38	(0)	2522304
2219	7.4	0.0	0.0	chr3	33717420	33717690	(164577869)	C	AluSg	SINE/Alu	(5)	305	35	2546318
13	12.6	0.0	3.6	chr3	37243577	37243604	(161051955)	+	(CAG)n	Simple_repeat	1	28	(0)	2551252
266	29.2	17.2	4.7	chr3	37974868	37975165	(160320394)	C	L2b	LINE/L2	(2)	3373	3031	2552352
20	32.8	2.8	0.0	chr3	43894415	43894486	(154401073)	+	(GC)n	Simple_repeat	1	74	(0)	2561332
492	28.5	6.6	0.9	chr3	44439445	44439674	(153855885)	+	LTR50	LTR/ERVL	349	592	(203)	2562104
1015	22.0	11.3	4.3	chr3	44439689	44440058	(153855501)	C	LTR52	LTR/ERVL	(14)	407	9	2562105
1441	7.8	0.0	0.0	chr3	44532776	44532955	(153762604)	C	AluSx	SINE/Alu	(8)	304	125	2562268
197	32.9	6.8	0.0	chr3	44532990	44533071	(153762488)	+	L2b	LINE/L2	3282	3369	(6)	2562265
193	27.6	11.1	1.0	chr3	45593479	45593586	(152701973)	+	MIR	SINE/MIR	40	158	(50)	2564110
563	21.4	0.0	0.0	chr3	45761567	45761664	(152533895)	+	MER81	DNA/hAT-Blackjack	17	114	(0)	2564394
4304	14.1	2.9	1.7	chr3	45940148	45940860	(152354699)	+	MER50	LTR/ERV1	1	722	(12)	2564687
1038	19.0	4.2	2.4	chr3	45940861	45941070	(152354489)	+	MER50-int	LTR/ERV1	7	220	(6985)	2564687
248	30.3	8.8	1.3	chr3	46997777	46997933	(151297626)	C	L2b	LINE/L2	(218)	3157	2988	2566231
2025	18.1	6.6	9.9	chr3	47515447	47516009	(150779550)	+	MER90a	LTR/ERV1	72	614	(0)	2567331
316	11.6	17.9	0.0	chr3	47516010	47516074	(150779485)	C	LTR65	LTR/ERV1	(445)	224	145	2567330
944	16.7	0.0	0.0	chr3	47516095	47516238	(150779321)	+	AluSz6	SINE/Alu	169	312	(0)	2567332
357	26.2	17.2	3.4	chr3	47522511	47522768	(150772791)	+	L2a	LINE/L2	2824	3123	(303)	2567351
1587	26.4	6.2	6.3	chr3	47978779	47979468	(150316091)	C	L1ME4b	LINE/L1	(744)	5402	4744	2568362
2136	11.9	0.0	0.0	chr3	48161795	48162079	(150133480)	+	AluSz	SINE/Alu	17	301	(11)	2568842
37	0.0	0.0	0.0	chr3	48162267	48162298	(150133261)	+	(TG)n	Simple_repeat	1	32	(0)	2568843
713	15.4	27.0	2.2	chr3	48162304	48162529	(150133030)	C	AluJb	SINE/Alu	(30)	282	1	2568844
11	28.5	4.9	3.5	chr3	49340061	49340142	(148955417)	+	(CGCGCCG)n	Simple_repeat	1	86	(0)	2571124
473	28.9	12.1	4.7	chr3	52457034	52457247	(145838312)	C	MIRb	SINE/MIR	(2)	266	35	2575911
15531	12.6	2.5	3.1	chr3	56494950	56495112	(141800447)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	2249	2582241
3630	17.2	6.0	3.8	chr3	57794462	57795257	(140500302)	C	L1MB7	LINE/L1	(53)	6131	5293	2584690
2397	10.8	0.0	0.0	chr3	57795258	57795564	(140499995)	+	AluSx3	SINE/Alu	1	307	(4)	2584691
348	30.2	4.3	3.2	chr3	139677197	139677381	(58618178)	+	L2a	LINE/L2	3228	3414	(12)	2699695
581	27.9	7.3	6.6	chr3	140941197	140941468	(57354091)	C	L1ME3G	LINE/L1	(291)	633	360	2701539
22	7.7	2.2	4.3	chr3	156674852	156674896	(41620663)	+	(GCCCCG)n	Simple_repeat	1	46	(0)	2724395
217	29.5	12.9	1.1	chr3	157090312	157090400	(41205159)	C	MIR3	SINE/MIR	(8)	200	100	2724957
15	18.1	5.8	1.8	chr3	179322883	179322934	(18972625)	+	(GGCCGCG)n	Simple_repeat	1	55	(0)	2755995
35	23.2	3.9	5.0	chr3	179451502	179451656	(18843903)	+	(CGCGGCG)n	Simple_repeat	1	161	(0)	2756239
438	35.5	12.0	0.7	chr3	184300692	184300972	(13994587)	+	L2a	LINE/L2	2563	2879	(540)	2764410
18	16.7	7.9	5.2	chr3	185498746	185498834	(12796725)	+	(GATCCCG)n	Simple_repeat	1	96	(0)	2766483
1515	31.5	1.6	4.2	chr3	187101518	187102170	(11193389)	C	L1MA7	LINE/L1	(4693)	1872	1216	2769578
807	20.6	5.2	2.0	chr3	194326487	194328036	(3967523)	+	(CA)n	Simple_repeat	1	1630	(0)	2780940
4095	15.4	3.6	1.3	chr3	194928677	194929381	(3366178)	+	MER50	LTR/ERV1	1	722	(12)	2782087
13	18.9	2.8	0.0	chr3	195259677	195259712	(3035847)	+	G-rich	Low_complexity	1	37	(0)	2782609
939	34.9	15.2	2.6	chr3	195697494	195698924	(2596635)	+	L2	LINE/L2	1394	3041	(378)	2783498
229	29.5	2.6	8.2	chr3	195698949	195699070	(2596489)	C	MamRep1527	LTR	(73)	896	782	2783500
823	20.8	4.5	0.0	chr3	195709005	195709172	(2586387)	C	MER58B	DNA/hAT-Charlie	(165)	176	1	2783524
2644	19.1	2.8	4.2	chr3	195709210	195709444	(2586115)	C	LTR73	LTR/ERV1	(0)	572	337	2783525
226	30.4	8.2	0.0	chr3	196143186	196143297	(2152262)	C	MIR3	SINE/MIR	(5)	203	82	2784332
14	21.8	5.3	5.0	chr4	932006	932081	(189282474)	+	(CCGCAG)n	Simple_repeat	1	80	(0)	2789688
6799	11.5	1.9	2.3	chr4	1912900	1913910	(188300645)	+	LTR13	LTR/ERVK	1	1007	(0)	2790820
296	20.0	5.0	6.9	chr4	10461093	10461194	(179753361)	+	MIR	SINE/MIR	50	149	(113)	2804462
12	23.1	3.7	3.6	chr4	10461415	10461468	(179753087)	+	(TGCGC)n	Simple_repeat	1	56	(0)	2804463
13	16.8	2.8	2.8	chr4	15681302	15681347	(174533208)	+	G-rich	Low_complexity	1	46	(0)	2813056
14	18.4	2.7	0.0	chr4	17811198	17811234	(172403321)	+	(CCCGGC)n	Simple_repeat	1	38	(0)	2816977
181	22.7	2.2	0.0	chr4	17811317	17811360	(172403195)	C	MIRc	SINE/MIR	(135)	133	89	2816978
20	10.1	0.0	0.0	chr4	48341707	48341738	(141872817)	+	(GGC)n	Simple_repeat	1	32	(0)	2863702
12	19.6	2.9	0.0	chr4	48342145	48342179	(141872376)	+	G-rich	Low_complexity	1	36	(0)	2863703
185	29.9	4.3	1.5	chr4	52711947	52712014	(137502541)	C	L2a	LINE/L2	(64)	3323	3254	2866617
2546	4.6	0.3	1.0	chr4	56436713	56437014	(133777541)	+	AluSx	SINE/Alu	1	300	(12)	2872602
1844	19.6	4.0	0.7	chr4	70994225	70994661	(119219894)	C	L1ME1	LINE/L1	(9)	6170	5719	2891631
1675	20.9	6.7	3.5	chr4	79210069	79210500	(111004055)	C	LTR7C	LTR/ERV1	(0)	471	25	2903326
35	29.7	1.1	5.5	chr4	82373481	82373661	(107840894)	+	(CGC)n	Simple_repeat	1	183	(0)	2907493
1975	12.5	3.3	0.0	chr4	88283116	88283404	(101931151)	C	AluJb	SINE/Alu	(13)	299	1	2916878
2670	17.8	2.3	0.9	chr4	123090826	123091290	(67123265)	C	MER70A	LTR/ERVL	(0)	472	1	2963452
18	13.6	3.7	5.4	chr4	124712247	124712300	(65502255)	+	(CTCCCG)n	Simple_repeat	1	56	(0)	2965643
23	24.2	1.6	0.0	chr4	124712431	124712493	(65502062)	+	(CCG)n	Simple_repeat	1	64	(0)	2965644
394	19.2	29.4	3.2	chr4	139454612	139454737	(50759818)	C	MER5A1	DNA/hAT-Charlie	(0)	166	8	2984659
17	7.3	3.5	0.0	chr4	152536696	152536724	(37677831)	+	(AATG)n	Simple_repeat	1	30	(0)	3003142
279	30.6	0.0	0.0	chr4	152536725	152536809	(37677746)	+	MIRc	SINE/MIR	166	250	(18)	3003143
2328	8.3	0.3	0.3	chr4	163167011	163167299	(27047256)	+	AluSg	SINE/Alu	1	289	(21)	3017677
15	13.3	7.3	0.0	chr4	183504266	183504306	(6710249)	+	(CGCACGC)n	Simple_repeat	1	44	(0)	3045071
14	3.6	6.7	3.1	chr4	183504426	183504455	(6710100)	+	(CGGAG)n	Simple_repeat	1	32	(0)	3045072
14	9.3	0.0	0.0	chr4	184734032	184734054	(5480501)	+	(GCC)n	Simple_repeat	1	23	(0)	3047089
900	16.1	6.9	5.3	chr5	16456093	16456262	(165081997)	C	AluJb	SINE/Alu	(7)	305	133	3075023
2479	18.7	3.8	0.0	chr5	34265461	34265893	(147272366)	+	MER70A	LTR/ERVL	22	471	(1)	3099582
16	14.2	0.0	0.0	chr5	34664160	34664190	(146874069)	+	(TTTA)n	Simple_repeat	1	31	(0)	3100190
942	15.4	25.5	0.9	chr5	34664208	34664434	(146873825)	+	AluSz6	SINE/Alu	1	302	(10)	3100191
17	15.4	4.7	0.0	chr5	36241269	36241311	(145296948)	+	(CTCTCC)n	Simple_repeat	1	45	(0)	3102471
27	19.1	4.7	5.4	chr5	37371280	37371385	(144166874)	+	G-rich	Low_complexity	1	111	(0)	3104376
189	28.3	4.8	0.0	chr5	40756193	40756252	(140782007)	C	L2c	LINE/L2	(52)	3335	3273	3109365
2298	10.2	0.0	0.0	chr5	43064333	43064635	(138473624)	+	AluSx	SINE/Alu	2	304	(8)	3112477
1891	15.9	20.4	3.2	chr5	43064636	43064675	(138473584)	+	MER61D	LTR/ERV1	465	501	(0)	3112476
2271	9.2	0.3	0.0	chr5	43120440	43120734	(138417525)	C	AluSx1	SINE/Alu	(16)	296	1	3112575
14	17.9	5.1	0.0	chr5	55307834	55307872	(126230387)	+	A-rich	Low_complexity	1	41	(0)	3123044
1671	28.9	9.4	4.4	chr5	65121743	65121997	(116416262)	+	ERV3-16A3_I-int	LTR/ERVL	2019	2311	(2685)	3137400
439	24.3	12.8	0.7	chr5	65121983	65122119	(116416140)	+	ERV3-16A3_I-int	LTR/ERVL	3228	3383	(2284)	3137400
1708	26.0	4.3	1.4	chr5	65122156	65122650	(116415609)	+	ERV3-16A3_I-int	LTR/ERVL	3320	3829	(1397)	3137400
14	14.4	5.0	2.4	chr5	72956052	72956091	(108582168)	+	(GCGGCGC)n	Simple_repeat	1	42	(0)	3149768
482	24.5	2.7	3.7	chr5	74287165	74287323	(107250936)	C	MIRc	SINE/MIR	(86)	182	35	3151751
16	20.1	5.9	0.0	chr5	74287329	74287379	(107250880)	+	(ATTA)n	Simple_repeat	1	54	(0)	3151752
1504	17.7	14.6	1.7	chr5	74287440	74287795	(107250464)	+	LTR52	LTR/ERVL	1	410	(11)	3151753
365	35.2	3.3	0.7	chr5	91332361	91332506	(90205753)	+	MLT1J2	LTR/ERVL-MaLR	13	162	(286)	3176070
184	31.5	0.0	0.0	chr5	91332525	91332578	(90205681)	+	L2a	LINE/L2	3084	3137	(289)	3176068
15	19.4	0.0	4.4	chr5	112707984	112708028	(68830231)	+	(CTCTCCC)n	Simple_repeat	1	45	(0)	3203153
389	28.0	8.6	4.0	chr5	115296014	115296236	(66242023)	C	MIRb	SINE/MIR	(0)	268	35	3206586
12	35.2	0.0	0.0	chr5	115296445	115296501	(66241758)	+	(CGCCCC)n	Simple_repeat	1	57	(0)	3206587
391	28.5	8.8	1.8	chr5	121962290	121962457	(59575802)	+	MIRb	SINE/MIR	88	268	(0)	3215351
14	8.1	9.8	2.2	chr5	126777769	126777809	(54760450)	+	(CGACGCG)n	Simple_repeat	1	45	(0)	3221960
232	18.7	6.2	2.6	chr5	132664560	132664636	(48873623)	+	L1ME4a	LINE/L1	6033	6112	(12)	3229725
26	32.3	0.0	0.0	chr5	137753348	137753433	(43784826)	+	(CCG)n	Simple_repeat	1	86	(0)	3237462
12	29.4	4.8	0.0	chr5	138467559	138467620	(43070639)	+	(CCGCAT)n	Simple_repeat	1	65	(0)	3238919
778	30.9	12.4	1.1	chr5	139708244	139708951	(41829308)	+	L2a	LINE/L2	2608	3412	(14)	3241348
605	23.6	16.4	0.0	chr5	139710335	139710512	(41827747)	C	MIRb	SINE/MIR	(30)	238	26	3241349
511	16.2	2.9	1.0	chr5	140719047	140719146	(40819113)	+	L1MD3	LINE/L1	6787	6888	(1107)	3243135
2619	4.5	0.0	1.3	chr5	140719151	140719463	(40818796)	+	AluY	SINE/Alu	1	309	(2)	3243136
14	19.4	2.3	2.3	chr5	145835254	145835296	(35702963)	+	(CCGCGCG)n	Simple_repeat	1	44	(0)	3251378
502	28.1	5.6	3.1	chr5	145855025	145855215	(35683044)	+	LTR85a	LTR/Gypsy?	337	532	(170)	3251418
183	22.2	6.9	1.2	chr5	150000001	150000082	(31538177)	C	L2	LINE/L2	(704)	2715	2629	3259012
238	30.9	0.0	0.0	chr5	151024857	151024924	(30513335)	+	L2	LINE/L2	2678	2745	(674)	3261003
254	29.0	16.6	0.8	chr5	151025182	151025313	(30512946)	+	MIR3	SINE/MIR	32	188	(20)	3261004
18	0.0	0.0	0.0	chr5	151924884	151924903	(29613356)	+	(T)n	Simple_repeat	1	20	(0)	3262871
2757	17.1	3.4	0.2	chr5	159993159	159993614	(21544645)	C	MER70A	LTR/ERVL	(0)	472	2	3277144
2589	19.2	2.8	0.4	chr5	162929855	162930314	(18607945)	C	MER70A	LTR/ERVL	(0)	472	2	3281801
13	29.6	1.8	1.8	chr5	173328637	173328695	(8209564)	+	(TGCG)n	Simple_repeat	1	59	(0)	3299413
2480	20.0	1.5	1.5	chr5	173423641	173424112	(8114147)	C	MER70A	LTR/ERVL	(0)	472	1	3299568
12	15.7	2.6	5.0	chr5	176388390	176388428	(5149831)	+	(CCCGGCC)n	Simple_repeat	1	40	(0)	3305144
217	34.0	4.5	2.8	chr5	176389843	176389900	(5148359)	C	MER5A	DNA/hAT-Charlie	(1)	188	128	3305145
2407	7.2	0.3	0.0	chr5	176389901	176390206	(5148053)	+	AluSp	SINE/Alu	1	307	(6)	3305146
217	34.0	4.5	2.8	chr5	176390207	176390256	(5148003)	C	MER5A	DNA/hAT-Charlie	(62)	127	78	3305145
2036	8.1	0.3	5.5	chr5	176390439	176390746	(5147513)	C	AluSx	SINE/Alu	(20)	292	1	3305147
341	22.9	7.6	3.9	chr5	176837948	176838074	(4700185)	C	L2a	LINE/L2	(0)	3426	3295	3306091
628	34.7	9.1	0.5	chr5	177606796	177607166	(3931093)	+	L2a	LINE/L2	3020	3425	(1)	3307721
2565	4.7	0.0	0.0	chr5	180493737	180494032	(1044227)	+	AluYk2	SINE/Alu	2	297	(14)	3312777
20	31.7	0.0	3.3	chr5	180494108	180494198	(1044061)	+	GA-rich	Low_complexity	1	91	(0)	3312778
14	19.7	2.3	3.4	chr5	180861159	180861208	(677051)	+	G-rich	Low_complexity	1	49	(0)	3313359
688	0.0	0.0	0.0	chr5	181218270	181218342	(319917)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3313881
230	32.8	0.0	0.0	chr5	181221443	181221509	(316750)	C	tRNA-Glu-GAG_	tRNA	(3)	72	6	3313888
183	28.6	2.0	0.0	chr6	3000305	3000353	(167805626)	C	MIR	SINE/MIR	(88)	174	125	3318234
2754	2.6	0.3	0.0	chr6	5003067	5003373	(165802606)	+	AluYg6	SINE/Alu	1	308	(3)	3321335
334	31.7	1.9	0.0	chr6	5030818	5030921	(165775058)	+	MER3	DNA/hAT-Charlie	1	106	(103)	3321390
195	28.6	4.9	1.3	chr6	6712481	6712558	(164093421)	+	L2b	LINE/L2	3253	3333	(42)	3323795
275	28.5	1.4	4.9	chr6	6712568	6712706	(164093273)	C	X7C_LINE	LINE/CR1	(39)	197	62	3323796
1486	24.5	11.2	10.9	chr6	6829477	6830357	(163975622)	C	Charlie7	DNA/hAT-Charlie	(235)	2377	1485	3323993
17	30.3	0.0	0.0	chr6	6830382	6830425	(163975554)	+	(TA)n	Simple_repeat	1	44	(0)	3323995
302	30.0	9.1	4.4	chr6	6830517	6830652	(163975327)	C	Charlie7	DNA/hAT-Charlie	(2328)	284	142	3323996
2021	17.0	0.0	0.0	chr6	6830665	6830975	(163975004)	+	AluJb	SINE/Alu	2	312	(0)	3323997
229	29.5	11.3	1.3	chr6	13574911	13575212	(157230767)	C	L2a	LINE/L2	(689)	2730	2395	3334514
2233	16.4	0.0	0.3	chr6	13931780	13932145	(156873834)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	3335178
743	25.1	2.2	3.3	chr6	13932146	13932227	(156873752)	+	MIR	SINE/MIR	129	213	(49)	3335177
627	21.6	9.9	14.7	chr6	13932267	13932913	(156873066)	C	MamRep1151	LTR?	(79)	630	18	3335179
1797	15.7	3.0	2.0	chr6	21271776	21272068	(149533911)	C	AluJo	SINE/Alu	(16)	296	1	3347379
23	14.7	2.2	0.0	chr6	24720260	24720304	(146085675)	+	(GGC)n	Simple_repeat	1	46	(0)	3352413
11	20.7	5.1	0.0	chr6	25992617	25992655	(144813324)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	3354452
951	23.8	2.9	1.2	chr6	26215623	26215862	(144590117)	C	AluJr	SINE/Alu	(47)	265	22	3354841
1477	15.7	7.1	0.0	chr6	26215900	26216148	(144589831)	C	AluSq2	SINE/Alu	(22)	291	24	3354842
2137	8.7	2.7	0.3	chr6	26283762	26284050	(144521929)	+	AluSc	SINE/Alu	1	296	(13)	3354950
2109	8.5	4.4	0.3	chr6	26284161	26284442	(144521537)	+	AluSq4	SINE/Alu	1	294	(17)	3354951
631	4.1	0.0	0.0	chr6	26571864	26571936	(144234043)	C	tRNA-Ala-GCY	tRNA	(3)	73	1	3355497
2408	8.7	0.3	0.6	chr6	26572428	26572739	(144233240)	+	AluSz	SINE/Alu	2	312	(0)	3355498
2174	13.0	0.7	1.3	chr6	27143066	27143365	(143662614)	+	AluSx1	SINE/Alu	1	298	(14)	3356361
26	0.0	0.0	0.0	chr6	27147818	27147842	(143658137)	+	(T)n	Simple_repeat	1	25	(0)	3356367
2295	5.3	0.0	2.6	chr6	27147859	27148123	(143657856)	C	AluSx	SINE/Alu	(54)	258	1	3356368
551	0.0	0.0	21.3	chr6	27631421	27631514	(143174465)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	3357259
1347	8.5	0.0	0.0	chr6	27772816	27772992	(143032987)	C	MER41G	LTR/ERV1	(361)	524	348	3357567
720	19.3	9.3	0.0	chr6	27830771	27830936	(142975043)	+	AluJr	SINE/Alu	1	183	(129)	3357669
1792	15.0	11.9	1.7	chr6	28616551	28616897	(142189082)	C	LTR35A	LTR/ERV1	(160)	387	1	3358917
2244	10.2	0.0	0.0	chr6	28754378	28754670	(142051309)	C	AluSx4	SINE/Alu	(15)	295	3	3359161
1946	13.6	3.3	3.7	chr6	28754671	28754971	(142051008)	C	THE1D	LTR/ERVL-MaLR	(47)	334	19	3359160
619	1.4	0.0	0.0	chr6	28863685	28863756	(141942223)	C	tRNA-Ala-GCY_	tRNA	(3)	72	1	3359354
630	24.6	8.3	0.5	chr6	30547637	30547854	(140258125)	+	MIRb	SINE/MIR	1	250	(18)	3361782
18	20.3	0.0	0.0	chr6	30614692	30614726	(140191253)	+	(AC)n	Simple_repeat	1	35	(0)	3361894
2457	5.7	1.3	0.0	chr6	31494551	31494850	(139311129)	+	AluSp	SINE/Alu	2	305	(8)	3363403
1994	16.4	0.0	0.3	chr6	31538157	31538449	(139267530)	C	AluSz	SINE/Alu	(14)	298	7	3363469
234	28.5	12.7	1.9	chr6	31661719	31661831	(139144148)	+	L2c	LINE/L2	3256	3386	(1)	3363682
14	28.6	2.8	2.7	chr6	31664207	31664277	(139141702)	+	(CTTCTG)n	Simple_repeat	1	73	(0)	3363689
303	36.7	12.5	0.0	chr6	31679616	31679762	(139126217)	C	L3	LINE/CR1	(823)	3276	3109	3363707
2329	8.6	0.3	0.0	chr6	31679766	31680067	(139125912)	+	AluSx	SINE/Alu	1	303	(9)	3363708
327	26.9	6.9	1.8	chr6	31691018	31691127	(139114852)	C	MIRc	SINE/MIR	(138)	130	15	3363722
16	0.0	0.0	0.0	chr6	31701373	31701390	(139104589)	+	(AC)n	Simple_repeat	1	18	(0)	3363744
15	21.8	2.7	0.0	chr6	31739966	31740002	(139065977)	+	(GC)n	Simple_repeat	1	38	(0)	3363802
1597	13.4	13.9	0.8	chr6	31838281	31838541	(138967438)	C	AluSx	SINE/Alu	(10)	302	2	3363989
1449	15.5	1.0	12.2	chr6	31838544	31838732	(138967247)	C	AluJb	SINE/Alu	(14)	298	121	3363990
2105	9.6	0.7	4.6	chr6	31838733	31839034	(138966945)	+	AluSx1	SINE/Alu	5	294	(18)	3363991
2312	7.3	2.6	0.3	chr6	31863224	31863524	(138942455)	C	AluSx	SINE/Alu	(4)	308	1	3364051
14	25.2	2.1	0.0	chr6	32130213	32130259	(138675720)	+	G-rich	Low_complexity	1	48	(0)	3364426
13	18.9	8.3	0.0	chr6	33207617	33207664	(137598315)	+	(CTCTTC)n	Simple_repeat	1	52	(0)	3365976
820	27.3	10.5	3.2	chr6	33570669	33571073	(137234906)	+	Charlie13a	DNA/hAT-Charlie	447	884	(630)	3366760
1822	11.6	4.1	4.4	chr6	34404771	34404783	(136401196)	+	AluJr	SINE/Alu	286	296	(16)	3368306
1679	23.6	2.6	8.2	chr6	34404784	34404847	(136401132)	+	L1ME1	LINE/L1	4676	4736	(1410)	3368308
2082	14.3	0.0	1.0	chr6	34404848	34405148	(136400831)	+	AluJo	SINE/Alu	1	298	(14)	3368309
1679	23.6	2.6	8.2	chr6	34405149	34405443	(136400536)	+	L1ME1	LINE/L1	4737	5027	(1119)	3368308
312	23.8	10.3	2.4	chr6	35469803	35469927	(135336052)	C	MIR	SINE/MIR	(101)	161	26	3370447
219	30.2	0.0	0.0	chr6	35690515	35690577	(135115402)	+	L2c	LINE/L2	3283	3345	(42)	3370919
2289	8.5	0.3	0.0	chr6	35690725	35691006	(135114973)	+	AluSp	SINE/Alu	1	283	(30)	3370920
376	27.1	6.3	3.6	chr6	37022823	37022960	(133783019)	C	MIR	SINE/MIR	(33)	229	88	3373747
250	24.6	1.5	0.0	chr6	37023245	37023309	(133782670)	+	MIRb	SINE/MIR	124	189	(79)	3373748
450	22.0	2.8	1.6	chr6	37051906	37052035	(133753944)	+	MIRc	SINE/MIR	30	157	(111)	3373818
225	19.1	0.0	0.0	chr6	37083843	37083884	(133722095)	+	L4_B_Mam	LINE/RTE-X	4896	4937	(4)	3373899
825	21.3	3.4	3.8	chr6	37083921	37084081	(133721898)	+	MER3	DNA/hAT-Charlie	1	160	(49)	3373900
2068	14.6	0.3	0.7	chr6	37084082	37084383	(133721596)	+	AluSz6	SINE/Alu	2	302	(10)	3373901
14	17.1	1.9	7.4	chr6	37169943	37169995	(133635984)	+	(GGCCGG)n	Simple_repeat	1	54	(0)	3374135
716	16.3	1.6	2.3	chr6	37182813	37182941	(133623038)	C	FLAM_A	SINE/Alu	(14)	128	1	3374168
378	26.9	1.4	9.6	chr6	37182951	37183106	(133622873)	C	MIR	SINE/MIR	(109)	159	17	3374165
2299	9.4	0.3	0.3	chr6	41926813	41927109	(128878870)	+	AluY	SINE/Alu	1	297	(14)	3382110
17	8.6	8.1	0.0	chr6	41941725	41941761	(128864218)	+	(GGCGCT)n	Simple_repeat	1	40	(0)	3382130
15	10.4	3.0	2.9	chr6	41941767	41941799	(128864180)	+	(CCCG)n	Simple_repeat	1	34	(0)	3382131
2123	11.6	3.3	1.7	chr6	42051679	42051980	(128753999)	+	AluSx1	SINE/Alu	1	307	(5)	3382427
678	26.5	9.9	0.0	chr6	42052000	42052199	(128753780)	+	MIRb	SINE/MIR	32	253	(15)	3382428
26626	4.3	0.2	0.1	chr6	51121436	51127584	(119678395)	+	L1PA3	LINE/L1	2	6152	(3)	3396618
12	12.2	3.7	0.0	chr6	52576573	52576599	(118229380)	+	(GGCAT)n	Simple_repeat	1	28	(0)	3398745
13473	28.8	5.7	5.1	chr6	67881437	67888662	(102917317)	C	HERVH-int	LTR/ERV1	(0)	7713	596	3416017
12	15.8	0.0	3.3	chr6	83859587	83859616	(86946363)	+	(CTCC)n	Simple_repeat	1	30	(0)	3437073
2434	8.7	0.3	0.0	chr6	90457193	90457501	(80348478)	+	AluSx1	SINE/Alu	1	310	(2)	3446427
455	32.0	8.3	4.7	chr6	90457502	90457781	(80348198)	C	MLT1J	LTR/ERVL-MaLR	(99)	413	116	3446426
196	25.8	11.4	0.0	chr6	107459778	107459839	(63346140)	+	L2b	LINE/L2	3279	3348	(27)	3468895
15	7.0	6.7	0.0	chr6	107459945	107459974	(63346005)	+	(TGGCAG)n	Simple_repeat	1	32	(0)	3468896
655	26.2	8.0	0.6	chr6	107460326	107460498	(63345481)	C	MIR	SINE/MIR	(60)	202	16	3468897
15	27.4	0.0	0.0	chr6	111259600	111259647	(59546332)	+	(AGGCGG)n	Simple_repeat	1	48	(0)	3475317
16	0.0	0.0	4.2	chr6	113971649	113971672	(56834307)	+	(TTA)n	Simple_repeat	1	24	(0)	3479423
22	0.0	0.0	0.0	chr6	118709533	118709556	(52096423)	+	(GT)n	Simple_repeat	1	24	(0)	3485554
31	0.0	0.0	0.0	chr6	118709557	118709583	(52096396)	+	(GA)n	Simple_repeat	1	27	(0)	3485555
29	0.0	0.0	0.0	chr6	125301483	125301507	(45504472)	+	(CA)n	Simple_repeat	1	25	(0)	3494127
285	28.6	5.3	12.3	chr6	136738968	136739066	(34066913)	C	L2a	LINE/L2	(92)	3334	3237	3510366
11926	11.6	2.0	0.9	chr6	136831459	136833070	(33972909)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	3510555
1128	31.4	4.5	6.0	chr6	139648766	139649218	(31156761)	+	L3	LINE/CR1	2339	2784	(1315)	3515012
19	16.3	0.0	0.0	chr6	143511562	143511597	(27294382)	+	(GCA)n	Simple_repeat	1	36	(0)	3519988
18	18.9	4.2	0.0	chr6	145814784	145814831	(24991148)	+	(CCCGC)n	Simple_repeat	1	50	(0)	3523214
223	27.2	15.6	2.6	chr6	145815054	145815170	(24990809)	C	MIR3	SINE/MIR	(60)	148	14	3523215
1417	27.5	8.1	9.1	chr6	149642201	149642892	(21163087)	+	L1ME5	LINE/L1	5439	6109	(85)	3528850
1969	22.4	10.5	7.3	chr6	149642907	149643437	(21162542)	+	MLT1F2	LTR/ERVL-MaLR	6	555	(5)	3528852
15	18.4	0.0	7.8	chr6	150143197	150143247	(20662732)	+	(CGG)n	Simple_repeat	1	51	(0)	3529746
380	20.6	3.2	2.1	chr6	157221227	157221320	(13584659)	C	L1MC4a	LINE/L1	(0)	7882	7788	3540566
252	33.1	6.1	3.1	chr6	158322690	158322817	(12483162)	C	L2b	LINE/L2	(0)	3375	3244	3542349
12	9.7	0.0	0.0	chr6	158559885	158559906	(12246073)	+	(TCAT)n	Simple_repeat	1	22	(0)	3542739
13	14.3	10.9	0.0	chr6	158559991	158560036	(12245943)	+	(CCCGCGCG)n	Simple_repeat	1	51	(0)	3542740
13	27.4	2.0	1.9	chr6	158560131	158560179	(12245800)	+	(CGG)n	Simple_repeat	1	88	(0)	3542741
14	9.0	5.1	4.9	chr6	158560180	158560218	(12245761)	+	G-rich	Low_complexity	1	41	(0)	3542742
13	14.8	2.3	6.8	chr6	159789358	159789400	(11016579)	+	(CGGCC)n	Simple_repeat	1	44	(0)	3544606
12	17.7	5.0	2.4	chr6	163413489	163413528	(7392451)	+	(CGCC)n	Simple_repeat	1	42	(0)	3549418
13	26.8	2.2	0.0	chr6	170584448	170584492	(221487)	+	(CCCG)n	Simple_repeat	1	46	(0)	3557615
1017	16.4	0.0	1.3	chr7	5525180	5525338	(153820635)	C	AluJr	SINE/Alu	(19)	293	137	3567248
255	26.9	0.0	0.0	chr7	5525340	5525406	(153820567)	C	L1MA10	LINE/L1	(64)	6270	6204	3567249
332	33.9	2.5	5.9	chr7	5525419	5525622	(153820351)	+	L2c	LINE/L2	3191	3387	(0)	3567250
27	22.1	0.0	0.0	chr7	5525625	5525687	(153820286)	+	(ATGA)n	Simple_repeat	1	63	(0)	3567251
208	25.4	7.3	3.1	chr7	5525688	5525752	(153820221)	+	LFSINE_Vert	SINE/tRNA	251	318	(141)	3567252
339	32.7	2.6	0.0	chr7	5525715	5525827	(153820146)	+	L2c	LINE/L2	3272	3387	(0)	3567253
1011	15.2	3.0	1.2	chr7	5526205	5526368	(153819605)	+	AluJo	SINE/Alu	132	298	(14)	3567254
18	19.9	2.2	0.0	chr7	6730018	6730063	(152615910)	+	(GGCGGA)n	Simple_repeat	1	47	(0)	3570020
1814	16.2	11.7	3.1	chr7	22094825	22095213	(137250760)	C	MSTA	LTR/ERVL-MaLR	(1)	427	1	3590198
12	20.1	2.9	0.0	chr7	23182167	23182200	(136163773)	+	(GCA)n	Simple_repeat	1	35	(0)	3591849
57	1.9	0.0	0.0	chr7	30671803	30671857	(128674116)	+	(TGA)n	Simple_repeat	1	55	(0)	3603457
21	21.9	4.0	3.8	chr7	30671858	30671932	(128674041)	+	GA-rich	Low_complexity	1	75	(0)	3603458
187	28.1	3.0	0.0	chr7	30672157	30672220	(128673753)	+	L2c	LINE/L2	3095	3160	(227)	3603459
13	20.3	4.3	2.0	chr7	44884997	44885043	(114460930)	+	(CGCCCGC)n	Simple_repeat	1	49	(0)	3625084
32	5.3	0.0	0.0	chr7	50450392	50450430	(108895543)	+	(CGTG)n	Simple_repeat	1	39	(0)	3632383
12	18.4	5.4	0.0	chr7	50450432	50450468	(108895505)	+	G-rich	Low_complexity	1	39	(0)	3632384
17	28.2	5.2	0.0	chr7	55964833	55964909	(103381064)	+	G-rich	Low_complexity	1	81	(0)	3639596
306	32.2	10.1	7.8	chr7	65558452	65558709	(93787264)	C	MIRb	SINE/MIR	(1)	261	4	3648019
219	25.9	10.8	4.6	chr7	65558918	65559061	(93786912)	C	MIR3	SINE/MIR	(111)	151	1	3648020
2532	5.5	0.0	0.3	chr7	73433200	73433506	(85912467)	+	AluSq2	SINE/Alu	2	307	(6)	3664623
258	18.8	8.0	0.0	chr7	74082797	74082865	(85263108)	C	Charlie7	DNA/hAT-Charlie	(2532)	80	6	3666139
21	18.3	0.0	0.0	chr7	74174225	74174268	(85171705)	+	(GCGT)n	Simple_repeat	1	44	(0)	3666407
1649	16.3	0.4	0.0	chr7	75876733	75876977	(83468996)	+	AluJo	SINE/Alu	1	246	(66)	3670801
429	28.1	5.2	2.7	chr7	75876978	75876991	(83468982)	+	MIRb	SINE/MIR	221	235	(33)	3670793
1851	10.9	2.2	1.4	chr7	75914373	75914647	(83431326)	+	AluJr	SINE/Alu	16	292	(20)	3670899
992	12.5	0.0	0.7	chr7	76165955	76166098	(83179875)	C	AluSz	SINE/Alu	(169)	143	1	3671467
13	27.0	1.6	3.2	chr7	76201662	76201722	(83144251)	+	G-rich	Low_complexity	1	62	(0)	3671569
261	28.7	10.3	1.4	chr7	100088687	100088829	(59257144)	C	MIRb	SINE/MIR	(87)	181	26	3705845
11	29.1	3.3	1.6	chr7	100088850	100088909	(59257064)	+	(GCCGCCA)n	Simple_repeat	1	62	(0)	3705846
20	25.0	1.6	1.6	chr7	100088957	100089019	(59256954)	+	(GGC)n	Simple_repeat	1	64	(0)	3705847
33	14.5	0.0	0.0	chr7	100167981	100168005	(59177968)	+	(GAGA)n	Simple_repeat	1	25	(0)	3706002
31	0.0	0.0	0.0	chr7	100168006	100168032	(59177941)	+	(AC)n	Simple_repeat	1	27	(0)	3706003
33	14.5	0.0	0.0	chr7	100168033	100168068	(59177905)	+	(GAGA)n	Simple_repeat	2	37	(0)	3706004
16	17.9	5.8	1.8	chr7	101165508	101165559	(58180414)	+	(GGCTC)n	Simple_repeat	1	55	(0)	3708140
253	27.7	3.8	6.5	chr7	105309625	105309732	(54036241)	C	MER102c	DNA/hAT-Charlie	(161)	170	66	3715500
352	31.4	10.6	6.9	chr7	105309808	105310169	(54035804)	C	L2b	LINE/L2	(0)	3375	2999	3715501
295	37.0	6.8	4.0	chr7	106015306	106015719	(53330254)	+	L2c	LINE/L2	2729	3157	(230)	3716960
1483	16.2	3.0	0.4	chr7	106642121	106642348	(52703625)	+	AluJo	SINE/Alu	49	282	(30)	3717872
11	11.3	6.9	0.0	chr7	116862408	116862436	(42483537)	+	(CACGCG)n	Simple_repeat	1	31	(0)	3731664
25	25.4	5.7	0.9	chr7	116953370	116953474	(42392499)	+	(CGGCCG)n	Simple_repeat	1	111	(0)	3731852
2429	21.7	0.6	1.3	chr7	119606293	119606767	(39739206)	+	MER70A	LTR/ERVL	1	472	(0)	3735351
16	30.9	1.4	1.4	chr7	121396138	121396206	(37949767)	+	(CCGC)n	Simple_repeat	1	70	(0)	3737605
2833	7.3	2.1	0.8	chr7	121526423	121526797	(37819176)	C	MLT2A1	LTR/ERVL	(64)	380	1	3737819
288	27.6	8.2	3.9	chr7	121526826	121526953	(37819020)	C	MLT1J2	LTR/ERVL-MaLR	(236)	212	79	3737823
20	29.6	0.0	3.6	chr7	127392070	127392152	(31953821)	+	G-rich	Low_complexity	1	83	(0)	3745667
193	31.9	2.8	0.0	chr7	127586041	127586109	(31759864)	C	L2c	LINE/L2	(5)	3421	3351	3745951
553	23.4	10.7	4.6	chr7	127586073	127586247	(31759726)	C	MIR	SINE/MIR	(4)	258	72	3745952
1249	22.6	7.0	1.5	chr7	128439040	128439363	(30906610)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	125	3747227
433	28.7	3.9	4.4	chr7	128439464	128439509	(30906464)	+	L1M5	LINE/L1	5570	5613	(511)	3747228
412	31.2	13.5	2.4	chr7	128738496	128738869	(30607104)	C	L2c	LINE/L2	(48)	3339	2918	3747900
31	29.5	2.4	1.5	chr7	129224897	129225023	(30120950)	+	G-rich	Low_complexity	1	130	(0)	3748759
927	24.9	0.9	2.4	chr7	129435502	129435760	(29910213)	+	MIRb	SINE/MIR	1	262	(6)	3749140
26	0.0	0.0	0.0	chr7	129435773	129435797	(29910176)	+	(ATC)n	Simple_repeat	1	25	(0)	3749141
239	21.1	0.6	0.0	chr7	129435798	129435859	(29910114)	C	MIR3	SINE/MIR	(150)	80	17	3749142
195	26.8	18.2	1.3	chr7	129435847	129436001	(29909972)	C	MIRc	SINE/MIR	(13)	255	69	3749143
1925	14.2	3.1	1.4	chr7	129640235	129640522	(29705451)	+	AluJo	SINE/Alu	1	293	(19)	3749583
15	18.3	2.7	0.0	chr7	129640569	129640605	(29705368)	+	(ATTA)n	Simple_repeat	1	38	(0)	3749584
442	32.9	7.3	0.7	chr7	129640687	129640839	(29705134)	+	MIR3	SINE/MIR	10	173	(35)	3749585
618	29.8	1.3	6.7	chr7	129640963	129641253	(29704720)	C	HAL1ME	LINE/L1	(5)	2502	2191	3749586
2761	5.9	0.0	0.0	chr7	129878403	129878705	(29467268)	+	AluY	SINE/Alu	2	304	(7)	3750009
1578	17.9	7.5	4.8	chr7	129880531	129880730	(29465243)	+	MER2	DNA/TcMar-Tigger	141	344	(1)	3750010
1089	17.6	0.0	2.0	chr7	130136937	130137133	(29208840)	+	MER3	DNA/hAT-Charlie	1	193	(16)	3750651
474	27.9	5.2	2.0	chr7	130137149	130137298	(29208675)	+	MIR3	SINE/MIR	19	173	(35)	3750652
2351	12.5	0.0	0.0	chr7	130282501	130282811	(29063162)	C	AluSx	SINE/Alu	(1)	311	1	3750894
2118	9.7	0.4	0.0	chr7	130413024	130413290	(28932683)	C	AluSx1	SINE/Alu	(44)	268	1	3751122
247	15.8	0.0	0.0	chr7	130413325	130413362	(28932611)	+	Alu	SINE/Alu	1	38	(95)	3751123
14	22.2	0.0	2.6	chr7	130413368	130413406	(28932567)	+	(TAA)n	Simple_repeat	1	39	(0)	3751124
1219	15.7	1.1	0.0	chr7	130413416	130413600	(28932373)	+	AluSz6	SINE/Alu	118	304	(8)	3751125
252	28.1	5.9	5.2	chr7	130915904	130916038	(28429935)	+	MIRc	SINE/MIR	2	137	(131)	3751820
676	24.9	3.9	3.1	chr7	130916073	130916299	(28429674)	C	MIR	SINE/MIR	(37)	225	1	3751821
17	4.9	0.0	0.0	chr7	131106641	131106661	(28239312)	+	(A)n	Simple_repeat	1	21	(0)	3752134
13	31.9	4.8	3.7	chr7	133574187	133574290	(25771683)	+	(GTAT)n	Simple_repeat	1	109	(0)	3756148
1835	14.1	0.0	8.7	chr7	134593480	134593813	(24752160)	C	AluSz6	SINE/Alu	(7)	305	1	3757717
274	27.4	9.3	2.5	chr7	135170070	135170189	(24175784)	C	MIRb	SINE/MIR	(110)	158	30	3758537
236	28.3	9.6	4.3	chr7	135212101	135212200	(24133773)	+	L1ME4a	LINE/L1	5902	6003	(121)	3758574
280	27.6	7.0	0.7	chr7	135558617	135558762	(23787211)	+	MER20B	DNA/hAT-Charlie	1	156	(627)	3759182
2223	8.7	3.7	0.0	chr7	135663657	135663943	(23682030)	C	AluSc	SINE/Alu	(11)	298	1	3759376
274	34.5	0.9	3.4	chr7	137986407	137986523	(21359450)	+	Charlie17a	DNA/hAT-Charlie	81	194	(23)	3762699
1810	17.5	0.7	1.0	chr7	138400054	138400345	(20945628)	C	AluJr	SINE/Alu	(17)	295	5	3763536
999	22.5	14.9	12.3	chr7	138400433	138400984	(20944989)	+	MER34A1	LTR/ERV1	10	578	(9)	3763537
211	30.8	12.0	1.7	chr7	138502400	138502518	(20843455)	C	MIRb	SINE/MIR	(107)	161	29	3763754
2086	5.2	10.3	0.0	chr7	139091218	139091486	(20254487)	+	AluY	SINE/Alu	1	300	(11)	3764898
954	15.1	3.2	0.0	chr7	139091620	139091771	(20254202)	C	FRAM	SINE/Alu	(15)	161	5	3764899
256	24.3	1.4	0.0	chr7	139091781	139091850	(20254123)	C	L3	LINE/CR1	(199)	3900	3830	3764900
2230	12.0	1.6	0.0	chr7	139119679	139119979	(20225994)	C	AluSz	SINE/Alu	(6)	306	1	3764959
2044	15.3	0.3	0.7	chr7	139120028	139120334	(20225639)	+	AluJr	SINE/Alu	5	310	(2)	3764960
2343	8.8	0.3	0.0	chr7	139339886	139340182	(20005791)	C	AluSp	SINE/Alu	(15)	298	1	3765382
1974	13.9	3.0	0.0	chr7	139343653	139343946	(20002027)	+	AluJb	SINE/Alu	1	303	(9)	3765387
223	33.4	6.5	3.5	chr7	139621127	139621292	(19724681)	C	MIRb	SINE/MIR	(0)	262	96	3765938
603	28.6	14.2	8.3	chr7	139621319	139621648	(19724325)	+	Tigger16a	DNA/TcMar-Tigger	317	703	(254)	3765939
496	3.3	0.0	0.0	chr7	140063507	140063566	(19282407)	+	Alu	SINE/Alu	224	283	(28)	3766654
26	0.0	0.0	0.0	chr7	140063567	140063591	(19282382)	+	(AAAAT)n	Simple_repeat	1	25	(0)	3766655
2132	14.2	4.7	0.6	chr7	140099508	140099832	(19246141)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	3766705
249	27.5	17.8	0.2	chr7	140223418	140223551	(19122422)	+	MIRc	SINE/MIR	47	200	(62)	3766925
245	21.0	1.2	9.0	chr7	140223626	140223714	(19122259)	C	LTR88b	LTR/Gypsy?	(94)	743	662	3766926
520	26.9	0.7	0.0	chr7	140697655	140697788	(18648185)	+	MIR	SINE/MIR	2	136	(126)	3768043
914	16.1	1.3	0.0	chr7	140697847	140697995	(18647978)	C	FRAM	SINE/Alu	(24)	152	2	3768044
239	18.0	2.0	7.4	chr7	140698069	140698122	(18647851)	C	MIR3	SINE/MIR	(75)	133	83	3768045
2354	10.9	0.0	0.0	chr7	140932213	140932515	(18413458)	C	AluSg	SINE/Alu	(7)	303	1	3768448
241	23.9	6.9	0.0	chr7	143393223	143393289	(15952684)	+	L2b	LINE/L2	3302	3373	(2)	3771854
1667	22.3	5.0	1.8	chr7	147337108	147337491	(12008482)	C	MER70B	LTR/ERVL	(137)	441	45	3777130
1697	18.3	16.0	3.0	chr7	148527519	148527817	(10818156)	C	MER66C	LTR/ERV1	(109)	446	76	3778942
270	14.6	2.0	0.0	chr7	148527824	148527871	(10818102)	C	MER66C	LTR/ERV1	(444)	111	63	3778942
1269	12.6	3.5	0.0	chr7	148527883	148528073	(10817900)	+	MER4D1	LTR/ERV1	706	903	(0)	3778941
607	26.5	9.3	0.9	chr7	148528074	148528275	(10817698)	C	Charlie25	DNA/hAT-Charlie	(2100)	424	203	3778938
12	25.6	3.4	3.3	chr7	148884434	148884494	(10461479)	+	(GCGCGC)n	Simple_repeat	1	61	(0)	3779540
930	0.0	0.0	0.0	chr7	148983755	148983855	(10362118)	+	HY3	scRNA	1	101	(0)	3779765
2151	12.9	0.0	0.3	chr7	149103220	149103514	(10242459)	C	AluJo	SINE/Alu	(15)	297	4	3780037
706	27.6	1.8	7.7	chr7	149127754	149128051	(10217922)	C	L1ME1	LINE/L1	(52)	6127	5848	3780096
1815	17.1	11.3	0.5	chr7	149128052	149128464	(10217509)	C	MER4D1	LTR/ERV1	(0)	900	389	3780097
333	28.6	6.4	1.3	chr7	149196312	149196460	(10149513)	+	MER5B	DNA/hAT-Charlie	3	159	(19)	3780268
15	0.0	0.0	0.0	chr7	149239672	149239690	(10106283)	+	(CGG)n	Simple_repeat	1	19	(0)	3780360
2393	6.5	0.7	2.3	chr7	149872076	149872383	(9473590)	C	AluY	SINE/Alu	(8)	303	1	3781255
205	37.2	9.7	4.8	chr7	149872504	149872709	(9473264)	+	L2c	LINE/L2	3104	3320	(67)	3781256
226	24.4	9.5	2.3	chr7	149873136	149873223	(9472750)	C	MIRb	SINE/MIR	(44)	224	130	3781257
4381	10.9	3.0	0.7	chr7	150322212	150322830	(9023143)	+	MER41B	LTR/ERV1	1	634	(0)	3781881
321	30.9	7.3	6.9	chr7	150325438	150325474	(9020499)	+	Chap1_Mam	DNA/hAT-Charlie	36	72	(270)	3781884
1794	16.5	0.3	1.7	chr7	150325475	150325771	(9020202)	C	AluJb	SINE/Alu	(19)	293	1	3781885
473	12.1	9.2	0.8	chr7	150359153	150360260	(8985713)	+	(CA)n	Simple_repeat	1	1210	(0)	3781942
1183	17.8	6.2	3.2	chr7	150360262	150360511	(8985462)	C	MER67C	LTR/ERV1	(220)	491	234	3781941
12	23.3	3.7	3.6	chr7	150369549	150369602	(8976371)	+	(TGGTGGC)n	Simple_repeat	1	56	(0)	3781960
828	20.1	8.7	1.6	chr7	151630414	151630595	(7715378)	C	MIR	SINE/MIR	(0)	262	67	3783797
4089	5.9	1.7	0.4	chr7	154676662	154677185	(4668788)	C	HERV1_LTRd	LTR/ERV1	(4)	531	1	3788600
345	29.5	8.0	2.7	chr7	155205477	155205664	(4140309)	C	MIR	SINE/MIR	(36)	226	28	3789348
199	32.9	1.5	0.7	chr7	156233938	156234657	(3111316)	+	(AATGCT)n	Simple_repeat	1	731	(0)	3790659
16	27.8	1.8	0.0	chr7	156640631	156640686	(2705287)	+	G-rich	Low_complexity	1	57	(0)	3791165
322	13.7	0.0	0.0	chr7	156949057	156949107	(2396866)	C	MLT1C	LTR/ERVL-MaLR	(364)	103	53	3791612
2135	6.2	2.9	1.1	chr7	156949219	156949490	(2396483)	C	AluSx	SINE/Alu	(35)	277	1	3791613
275	32.3	9.3	9.3	chr7	157347506	157347582	(1998391)	+	MIRb	SINE/MIR	63	146	(122)	3792358
2249	12.5	0.0	0.0	chr7	157347791	157348095	(1997878)	C	AluSx	SINE/Alu	(7)	305	1	3792360
1404	19.6	1.1	5.0	chr7	157564056	157564143	(1781830)	+	L1MB3	LINE/L1	5042	5124	(1022)	3792589
718	24.4	3.8	0.9	chr7	158830063	158830293	(515680)	C	MER65A	LTR/ERV1	(207)	238	1	3793758
12	17.4	8.9	0.0	chr8	6708877	6708921	(138429715)	+	(CCGGCGTC)n	Simple_repeat	1	49	(0)	3802489
2121	23.6	4.0	0.4	chr8	15594734	15595188	(129543448)	C	MER70A	LTR/ERVL	(0)	472	1	3815629
3278	21.4	7.6	2.1	chr8	15595189	15595642	(129542994)	C	L1MEc	LINE/L1	(5896)	504	39	3815627
246	26.0	4.0	0.0	chr8	23072643	23072715	(122065921)	C	L1MEc	LINE/L1	(6141)	259	184	3827301
20	27.2	3.2	3.1	chr8	23074911	23075003	(122063633)	+	(CTCT)n	Simple_repeat	1	96	(0)	3827308
21	19.8	0.0	0.0	chr8	23074963	23075011	(122063625)	+	(CT)n	Simple_repeat	1	49	(0)	3827309
19	19.1	1.3	7.8	chr8	31033715	31033790	(114104846)	+	(GGCGG)n	Simple_repeat	1	77	(0)	3840915
70	0.0	0.0	0.0	chr8	37836039	37836098	(107302538)	+	(AC)n	Simple_repeat	1	60	(0)	3851066
12	17.1	4.9	2.3	chr8	41895979	41896019	(103242617)	+	(CGCAGCC)n	Simple_repeat	1	43	(0)	3857794
789	15.3	6.2	0.0	chr8	48007724	48007860	(97130776)	C	FRAM	SINE/Alu	(0)	176	31	3862760
2434	7.0	0.3	0.0	chr8	48007924	48008221	(97130415)	C	AluSx	SINE/Alu	(13)	299	1	3862761
1236	25.1	8.6	11.1	chr8	54173009	54173545	(90965091)	+	Kanga1a	DNA/TcMar-Tc2	83	605	(149)	3870648
18	21.2	0.0	0.0	chr8	90082709	90082746	(55055890)	+	(GT)n	Simple_repeat	1	38	(0)	3920710
13	24.0	0.0	2.4	chr8	100953004	100953044	(44185592)	+	(GCCGG)n	Simple_repeat	1	41	(0)	3937837
12	19.3	0.0	10.3	chr8	102239559	102239616	(42899020)	+	(CCTCC)n	Simple_repeat	1	58	(0)	3940006
108	16.2	2.7	3.7	chr8	102528542	102528802	(42609834)	+	(GTGCTGT)n	Simple_repeat	1	268	(0)	3940563
345	32.1	7.1	4.1	chr8	102807682	102807942	(42330694)	C	L2b	LINE/L2	(179)	3208	2927	3941147
297	22.8	9.8	0.0	chr8	142943862	142943958	(2194678)	C	MIR3	SINE/MIR	(86)	144	30	4005479
2047	26.2	5.2	2.2	chr8	143101029	143101700	(2036936)	+	L1ME1	LINE/L1	5486	6178	(1)	4005728
1121	22.4	14.5	1.0	chr8	143218938	143219347	(1919289)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	31	4005924
274	37.4	1.8	0.0	chr8	143280920	143281026	(1857610)	+	L2b	LINE/L2	3265	3373	(2)	4006008
554	20.6	16.4	0.5	chr8	143281228	143281417	(1857219)	C	LTR50	LTR/ERVL	(6)	789	564	4006009
17	27.7	2.4	7.1	chr8	144336660	144336783	(801853)	+	(GGCGCC)n	Simple_repeat	1	127	(0)	4007464
33	2.9	0.0	0.0	chr8	144336885	144336919	(801717)	+	(GGC)n	Simple_repeat	1	35	(0)	4007465
1742	15.2	0.6	2.9	chr9	37423157	37423472	(100971245)	C	AluJo	SINE/Alu	(3)	309	1	4062642
2601	4.8	2.3	0.7	chr9	37800134	37800428	(100594289)	+	AluSg7	SINE/Alu	1	300	(9)	4063414
260	24.7	3.6	6.9	chr9	37903534	37903620	(100491097)	+	MIR3	SINE/MIR	111	194	(14)	4063616
13	14.7	7.9	0.0	chr9	37904198	37904235	(100490482)	+	(GCCCGCG)n	Simple_repeat	1	41	(0)	4063617
2249	22.4	1.9	0.4	chr9	82447343	82447805	(55946912)	+	MER70A	LTR/ERVL	3	472	(0)	4101487
1258	25.0	9.8	0.3	chr9	92160834	92161194	(46233523)	+	MER70A	LTR/ERVL	5	403	(69)	4116277
16	19.0	0.0	7.3	chr9	95426789	95426843	(42967874)	+	(CCCGG)n	Simple_repeat	1	55	(0)	4121215
611	15.0	0.9	0.9	chr9	97506805	97506918	(40887799)	C	MER5A1	DNA/hAT-Charlie	(2)	164	51	4124604
2673	17.2	1.7	0.0	chr9	97742584	97743047	(40651670)	+	MER70A	LTR/ERVL	1	472	(0)	4125038
329	32.4	4.6	1.4	chr9	97928549	97928695	(40466022)	+	MIRb	SINE/MIR	109	260	(8)	4125427
391	18.8	17.9	4.7	chr9	97928712	97928923	(40465794)	+	L1ME3G	LINE/L1	433	678	(246)	4125428
237	25.0	8.9	1.1	chr9	97928952	97929044	(40465673)	+	L1ME4a	LINE/L1	6021	6121	(3)	4125429
15	25.0	1.6	4.8	chr9	97984739	97984800	(40409917)	+	(GCC)n	Simple_repeat	1	63	(0)	4125548
12	7.2	10.3	0.0	chr9	98192676	98192704	(40202013)	+	(GGCGG)n	Simple_repeat	1	32	(0)	4126036
325	33.3	2.6	2.4	chr9	98192889	98193096	(40201621)	+	MIR	SINE/MIR	40	246	(22)	4126037
479	27.2	14.8	2.1	chr9	98254864	98255051	(40139666)	+	MIRc	SINE/MIR	26	241	(27)	4126181
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
12	18.4	5.4	0.0	chr9	108933745	108933781	(29460936)	+	(GCAGCCC)n	Simple_repeat	1	39	(0)	4143525
537	25.2	11.0	2.9	chr9	111897962	111898169	(26496548)	C	L2a	LINE/L2	(1)	3425	3199	4148758
24	18.9	4.4	1.4	chr9	112750624	112750691	(25644026)	+	(CCTC)n	Simple_repeat	1	71	(0)	4150443
18	0.0	0.0	0.0	chr9	113150983	113151004	(25243713)	+	(GCG)n	Simple_repeat	1	22	(0)	4151083
15	9.4	5.6	2.6	chr9	114504708	114504743	(23889974)	+	(GCCCCC)n	Simple_repeat	1	38	(0)	4153793
851	12.0	0.8	0.8	chr9	114610940	114611064	(23783653)	+	AluJr	SINE/Alu	1	125	(187)	4154051
248	29.1	9.1	2.6	chr9	122264162	122264274	(16130443)	+	MIRb	SINE/MIR	99	219	(49)	4168660
484	36.0	4.3	3.8	chr9	124110555	124110664	(14284053)	C	MIRb	SINE/MIR	(14)	254	145	4171951
26	20.9	0.0	0.0	chr9	125189733	125189788	(13204929)	+	(GCG)n	Simple_repeat	1	56	(0)	4174090
12	17.4	3.8	7.3	chr9	127397477	127397529	(10997188)	+	(GCC)n	Simple_repeat	1	55	(0)	4178130
969	24.3	7.2	0.6	chr9	127857798	127858132	(10536585)	+	LTR33	LTR/ERVL	156	514	(1)	4179181
11	28.2	0.0	2.2	chr9	128142280	128142324	(10252393)	+	GA-rich	Low_complexity	1	45	(0)	4179836
2112	13.2	1.0	0.6	chr9	128142329	128142639	(10252078)	+	AluSz6	SINE/Alu	1	312	(0)	4179837
454	31.6	7.3	2.3	chr9	128370643	128370866	(10023851)	+	L2a	LINE/L2	3165	3424	(2)	4180367
329	30.0	9.6	0.0	chr9	128370865	128371014	(10023703)	C	L2b	LINE/L2	(994)	2425	2260	4180346
27	6.0	0.0	0.0	chr9	128371210	128371244	(10023473)	+	(CCCTC)n	Simple_repeat	1	35	(0)	4180370
29	17.8	0.0	0.0	chr9	128787274	128787330	(9607387)	+	(GGC)n	Simple_repeat	1	57	(0)	4181331
2182	13.6	0.0	0.3	chr9	129057597	129057905	(9336812)	C	AluJb	SINE/Alu	(4)	308	1	4182000
782	15.3	1.9	15.1	chr9	129057908	129058114	(9336603)	+	Tigger2	DNA/TcMar-Tigger	2471	2658	(60)	4182001
1799	19.6	0.0	2.0	chr9	129058115	129058420	(9336297)	+	AluJb	SINE/Alu	1	300	(12)	4182002
782	15.3	1.9	15.1	chr9	129058421	129058450	(9336267)	+	Tigger2	DNA/TcMar-Tigger	2659	2676	(42)	4182001
13	20.6	6.8	3.2	chr9	129803226	129803284	(8591433)	+	(GGC)n	Simple_repeat	1	63	(0)	4183683
16	20.5	3.6	5.2	chr9	129803417	129803472	(8591245)	+	(GC)n	Simple_repeat	1	58	(0)	4183684
253	30.9	7.3	2.3	chr9	129826767	129826895	(8567822)	C	L2b	LINE/L2	(6)	3420	3240	4183728
385	21.4	15.4	0.8	chr9	129826894	129827020	(8567697)	C	MIRc	SINE/MIR	(117)	151	3	4183729
20	21.3	4.9	3.5	chr9	130681524	130681604	(7713113)	+	(GCGCAC)n	Simple_repeat	1	85	(0)	4185574
39	0.0	0.0	0.0	chr9	130681606	130681641	(7713076)	+	(CGC)n	Simple_repeat	1	36	(0)	4185575
182	34.3	8.2	3.6	chr9	132114176	132114314	(6280403)	+	L2a	LINE/L2	3252	3397	(29)	4188254
229	35.6	8.4	2.2	chr9	132114385	132114562	(6280155)	C	L2b	LINE/L2	(255)	3120	2931	4188255
18	27.5	0.0	0.0	chr9	132582025	132582072	(5812645)	+	GA-rich	Low_complexity	1	48	(0)	4189187
775	15.4	3.0	0.8	chr9	133124401	133124530	(5270187)	+	FLAM_C	SINE/Alu	1	133	(10)	4190092
297	28.9	0.1	0.1	chr9	133124531	133124619	(5270098)	+	(AC)n	Simple_repeat	2	91	(0)	4190093
1614	24.1	11.3	1.1	chr9	133124821	133125446	(5269271)	+	L1MC5	LINE/L1	8607	9304	(0)	4190094
1326	25.7	5.0	13.1	chr9	136760821	136761260	(1633457)	+	MLT1C	LTR/ERVL-MaLR	2	412	(55)	4194763
2339	10.0	0.0	0.0	chr9	136761261	136761560	(1633157)	C	AluSp	SINE/Alu	(13)	300	1	4194764
13	18.1	0.0	7.0	chr9	137240441	137240446	(1154271)	+	(GCCCC)n	Simple_repeat	1	13	(30)	4195375
17	7.9	0.0	0.0	chr9	137240447	137240473	(1154244)	+	(CCCCT)n	Simple_repeat	1	27	(0)	4195376
13	18.1	0.0	7.0	chr9	137240474	137240483	(1154234)	+	(GCCCC)n	Simple_repeat	14	43	(0)	4195375
183	29.7	3.0	0.0	chr9	137316617	137316680	(1078037)	C	L2c	LINE/L2	(232)	3155	3087	4195487
15	10.6	0.0	5.9	chrX	21839743	21839776	(134201119)	+	(GGT)n	Simple_repeat	1	34	(0)	4395016
15	28.4	0.0	4.6	chrX	37685891	37685955	(118354940)	+	(GCC)n	Simple_repeat	1	65	(0)	4417772
314	23.1	0.0	0.0	chrX	37686421	37686498	(118354397)	+	MADE2	DNA/TcMar-Mariner	1	78	(2)	4417773
12	30.9	0.0	2.0	chrX	107677040	107677089	(48363806)	+	GA-rich	Low_complexity	1	50	(0)	4504626
16	21.3	5.6	0.0	chrX	153610051	153610104	(2430791)	+	(GCGTGC)n	Simple_repeat	1	57	(0)	4570476
749	30.9	13.8	1.4	chrX	154308051	154308619	(1732276)	C	L2a	LINE/L2	(95)	3331	2668	4571675