641	26.9	9.8	2.2	chr1	4302417	4302728	(244653694)	+	MLT1I	LTR/ERVL-MaLR	74	411	(0)	5118
212	22.4	2.0	0.0	chr1	4302801	4302849	(244653573)	C	MIRc	SINE/MIR	(129)	139	90	5119
12	24.6	0.0	2.5	chr1	4302852	4302891	(244653531)	+	(TCC)n	Simple_repeat	1	40	(0)	5120
140	18.5	0.7	0.0	chr1	4302955	4302983	(244653439)	+	(TTCCA)n	Simple_repeat	1	31	(0)	5121
64	6.2	1.1	1.1	chr1	4302984	4303071	(244653351)	+	(GTTCC)n	Simple_repeat	1	89	(0)	5122
140	18.5	0.7	0.0	chr1	4303072	4303312	(244653110)	+	(TTCCA)n	Simple_repeat	2	242	(0)	5123
2357	9.9	0.0	1.0	chr1	16416396	16416698	(232539724)	+	AluSz	SINE/Alu	1	300	(12)	27436
2514	16.6	3.0	5.4	chr1	16416699	16417079	(232539343)	+	MER70A	LTR/ERVL	93	472	(0)	27435
253	23.8	3.1	1.6	chr1	23392180	23392243	(225564179)	C	Charlie24	DNA/hAT-Charlie	(35)	2415	2351	42298
244	18.5	5.5	3.4	chr1	23392244	23392818	(225563604)	+	(AC)n	Simple_repeat	1	582	(0)	42299
328	31.3	4.7	7.6	chr1	29722474	29722522	(219233900)	C	L2b	LINE/L2	(6)	3369	3322	57161
2781	18.4	2.3	0.0	chr1	29722523	29722983	(219233439)	C	MER70A	LTR/ERVL	(0)	472	1	57162
328	31.3	4.7	7.6	chr1	29722984	29723130	(219233292)	C	L2b	LINE/L2	(54)	3321	3179	57161
2202	20.2	3.7	1.6	chr1	30444740	30445187	(218511235)	C	MER70A	LTR/ERVL	(14)	458	1	58421
422	27.2	7.2	0.0	chr1	30445194	30445382	(218511040)	C	MIRb	SINE/MIR	(9)	259	44	58422
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
14	29.0	0.0	0.0	chr1	46041355	46041400	(202915022)	+	(AATG)n	Simple_repeat	1	46	(0)	89209
253	29.2	6.5	11.7	chr1	57442075	57442287	(191514135)	+	MIRb	SINE/MIR	60	260	(8)	110817
413	35.9	0.0	2.3	chr1	57442316	57442489	(191513933)	C	L4_B_Mam	LINE/RTE-X	(2917)	2024	1855	110818
553	29.7	4.4	4.4	chr1	57442552	57442801	(191513621)	+	Chap1_Mam	DNA/hAT-Charlie	75	324	(18)	110819
1084	29.4	14.3	8.4	chr1	62146811	62147356	(186809066)	C	L2a	LINE/L2	(786)	2633	2111	119586
1894	16.4	3.2	2.9	chr1	63986611	63986920	(184969502)	+	AluJb	SINE/Alu	1	311	(1)	123078
6555	11.7	13.7	1.7	chr1	64184166	64184714	(184771708)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	530	123452
387	32.4	5.1	5.9	chr1	67610540	67610775	(181345647)	+	MamGypLTR1d	LTR/Gypsy	537	770	(43)	129253
1779	12.6	4.1	16.0	chr1	70420293	70420639	(178535783)	C	MER1B	DNA/hAT-Charlie	(33)	306	1	133400
5960	16.0	7.2	2.8	chr1	72692365	72694089	(176262333)	C	MER50-int	LTR/ERV1	(5414)	1791	2	136539
3636	18.5	2.9	1.9	chr1	72694127	72694815	(176261607)	C	MER50	LTR/ERV1	(12)	722	27	136539
2306	10.0	0.7	0.3	chr1	77645690	77645989	(171310433)	+	AluSx	SINE/Alu	1	301	(11)	143221
193	36.4	3.7	8.5	chr1	77645990	77646085	(171310337)	C	MER5A	DNA/hAT-Charlie	(83)	106	7	143220
2271	12.2	0.0	1.0	chr1	77646210	77646521	(171309901)	C	AluJb	SINE/Alu	(2)	310	2	143222
1318	25.0	2.7	2.4	chr1	77646601	77647010	(171309412)	+	L1MB7	LINE/L1	32	442	(5958)	143223
2048	15.8	0.0	0.3	chr1	84836055	84836357	(164120065)	+	AluJb	SINE/Alu	1	302	(10)	153181
40	0.0	0.0	0.0	chr1	85580463	85580496	(163375926)	+	(AC)n	Simple_repeat	1	34	(0)	154403
73	1.5	0.0	0.0	chr1	85580533	85580599	(163375823)	+	(AC)n	Simple_repeat	1	67	(0)	154403
2423	24.3	4.8	1.6	chr1	88748106	88748652	(160207770)	C	L1ME1	LINE/L1	(28)	6151	5587	158915
1837	19.3	1.7	0.0	chr1	88748653	88748947	(160207475)	+	AluJr	SINE/Alu	1	300	(12)	158916
11083	12.0	1.7	1.1	chr1	89204343	89205878	(159750544)	+	MSTA-int	LTR/ERVL-MaLR	1	1555	(76)	159609
1624	13.8	0.4	2.8	chr1	89647830	89648082	(159308340)	+	AluJo	SINE/Alu	50	296	(16)	160128
4124	14.3	4.4	0.7	chr1	101452500	101453194	(147503228)	+	MER50	LTR/ERV1	1	722	(12)	178056
271	11.1	0.0	0.0	chr1	101453195	101453230	(147503192)	+	MER50-int	LTR/ERV1	7	42	(7163)	178056
426	16.5	1.2	0.0	chr1	101453233	101453311	(147503111)	C	MER21A	LTR/ERVL	(463)	405	326	178043
16	9.6	0.0	0.0	chr1	103261084	103261106	(145695316)	+	(A)n	Simple_repeat	1	23	(0)	180277
1555	19.1	4.5	2.7	chr1	106712571	106712826	(142243596)	+	Tigger6b	DNA/TcMar-Tigger	1221	1488	(109)	184396
2013	21.6	0.9	13.1	chr1	106712827	106713360	(142243062)	+	MER70A	LTR/ERVL	1	468	(4)	184397
797	27.3	8.5	4.1	chr1	108831291	108831645	(140124777)	C	L1ME4c	LINE/L1	(351)	479	100	187394
1928	9.9	6.4	5.1	chr1	108831646	108831938	(140124484)	C	AluSx3	SINE/Alu	(14)	297	1	187395
282	33.3	3.6	5.7	chr1	110567041	110567180	(138389242)	+	MIR	SINE/MIR	107	243	(19)	190384
963	19.9	9.5	5.2	chr1	113187852	113187972	(135768450)	C	L1ME2z	LINE/L1	(408)	6036	5913	194631
2460	18.3	4.3	1.1	chr1	113187973	113188425	(135767997)	+	MER70A	LTR/ERVL	1	468	(4)	194632
1355	19.9	6.0	3.1	chr1	113786301	113786686	(135169736)	+	MLT1D	LTR/ERVL-MaLR	1	468	(37)	195513
2634	27.0	10.0	6.5	chr1	115616793	115617982	(133338440)	+	L1MCc	LINE/L1	23	1259	(5164)	198449
1736	25.7	5.3	0.2	chr1	115617985	115618397	(133338025)	+	MER70B	LTR/ERVL	1	435	(143)	198450
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1197	13.4	1.4	20.3	chr1	150279885	150280249	(98676173)	+	AluJo	SINE/Alu	14	308	(4)	218673
250	38.1	7.5	0.0	chr1	151945023	151945169	(97011253)	C	MamSINE1	SINE/tRNA-RTE	(36)	254	96	222169
919	21.1	0.0	2.2	chr1	154071115	154071281	(94885141)	C	AluJb	SINE/Alu	(30)	282	118	225376
4464	10.5	2.2	3.2	chr1	154071299	154071627	(94884795)	C	L1PB1	LINE/L1	(0)	6151	5830	225378
1926	13.7	0.0	2.5	chr1	161145684	161145968	(87810454)	+	AluJb	SINE/Alu	1	278	(34)	236964
325	30.4	2.1	2.1	chr1	164921077	164921170	(84035252)	+	MIRb	SINE/MIR	174	267	(1)	242827
1595	21.8	13.1	1.0	chr1	167074129	167074619	(81881803)	+	MLT1G1	LTR/ERVL-MaLR	21	579	(0)	246112
3268	27.3	9.4	4.2	chr1	167074622	167074906	(81881516)	C	L2a	LINE/L2	(327)	3099	2813	246104
1688	4.9	0.0	3.5	chr1	169550129	169550359	(79406063)	C	L1PA5	LINE/L1	(0)	6154	5932	250097
3915	16.9	1.5	3.1	chr1	195732186	195732931	(53223491)	+	MER50	LTR/ERV1	1	734	(0)	287776
6117	15.5	7.9	0.9	chr1	195732932	195734656	(53221766)	+	MER50-int	LTR/ERV1	1	1848	(5357)	287776
1153	29.8	5.6	1.4	chr1	197632741	197633166	(51323256)	+	ERVL-B4-int	LTR/ERVL	4888	5332	(382)	290156
17	0.0	0.0	0.0	chr1	198012976	198012994	(50943428)	+	(T)n	Simple_repeat	1	19	(0)	290652
1593	14.8	4.5	0.4	chr1	198013010	198013265	(50943157)	+	AluJb	SINE/Alu	40	306	(6)	290653
1846	13.5	3.2	0.4	chr1	200341901	200342174	(48614248)	C	AluSx1	SINE/Alu	(30)	282	1	294061
719	23.9	13.9	9.5	chr1	200342210	200342257	(48614165)	C	MLT1D	LTR/ERVL-MaLR	(0)	467	413	294062
1776	14.6	2.4	1.0	chr1	200342258	200342545	(48613877)	+	AluJb	SINE/Alu	18	309	(3)	294063
815	23.3	11.8	7.3	chr1	200342546	200342919	(48613503)	C	MLT1D	LTR/ERVL-MaLR	(55)	412	17	294062
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
2399	8.9	0.3	0.0	chr1	200488024	200488305	(48468117)	+	AluSp	SINE/Alu	1	283	(30)	294358
345	35.1	6.9	2.9	chr1	200980022	200980229	(47976193)	+	Charlie22a	DNA/hAT-Charlie	165	381	(110)	295324
2307	10.0	0.3	0.3	chr1	203554738	203555047	(45401375)	+	AluSx	SINE/Alu	1	310	(2)	299824
746	29.6	2.7	0.8	chr1	203555053	203555304	(45401118)	C	MLT1J	LTR/ERVL-MaLR	(214)	298	42	299825
208	21.5	7.1	4.4	chr1	203615613	203615680	(45340742)	+	L3b	LINE/CR1	5130	5199	(33)	299954
186	27.4	1.6	7.5	chr1	203615861	203615927	(45340495)	C	MIR1_Amn	SINE/MIR	(88)	142	80	299955
1614	14.7	0.0	3.7	chr1	203615959	203616230	(45340192)	+	AluJb	SINE/Alu	51	312	(0)	299956
346	26.7	8.7	0.8	chr1	210654377	210654493	(38301929)	+	L2b	LINE/L2	3245	3371	(4)	311476
40918	5.9	0.7	0.6	chr1	211689035	211694119	(37262303)	+	Harlequin-int	LTR/ERV1	1806	6896	(0)	313200
1715	22.9	2.5	2.9	chr1	216590967	216591381	(32365041)	+	MER21C	LTR/ERVL	7	512	(426)	320539
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
2188	16.9	4.6	11.0	chr1	224607211	224607917	(24348505)	C	MER4CL34	LTR/ERV1	(5)	760	1	332862
4187	15.2	3.4	1.9	chr1	224607986	224608292	(24348130)	C	MER50	LTR/ERV1	(0)	734	435	332863
3731	6.5	0.9	0.0	chr1	224608293	224608751	(24347671)	C	LTR2	LTR/ERV1	(0)	463	1	332864
248	19.9	0.6	14.6	chr1	227033638	227033732	(21922690)	C	MIR	SINE/MIR	(105)	103	17	336825
22076	8.3	2.1	0.7	chr1	227551780	227556010	(21400412)	+	L1PA4	LINE/L1	2202	6465	(5)	337635
7741	21.5	2.4	2.9	chr1	227556186	227557772	(21398650)	+	HERV3-int	LTR/ERV1	6848	8426	(0)	337637
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
335	23.6	9.7	2.1	chr1	229844282	229844424	(19111998)	C	L1MEd	LINE/L1	(5605)	1498	1344	341001
1746	23.9	4.9	2.6	chr1	229844439	229844859	(19111563)	+	MER70B	LTR/ERVL	2	432	(146)	341006
1615	17.0	19.5	0.5	chr1	232949718	232950119	(16006303)	+	LTR54B	LTR/ERV1	1	497	(1)	345698
422	24.9	2.3	9.1	chr1	232950120	232950204	(16006218)	+	MER5B	DNA/hAT-Charlie	89	172	(6)	345697
246	19.8	4.9	0.9	chr1	235078154	235078768	(13877654)	+	(TG)n	Simple_repeat	1	645	(0)	348979
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
4040	15.5	3.0	0.6	chr1	239134193	239134886	(9821536)	+	MER50	LTR/ERV1	1	711	(23)	355663
345	25.4	6.2	3.0	chr10	2729724	2729926	(131067496)	+	L1ME3G	LINE/L1	9	218	(706)	374093
377	22.7	6.4	0.0	chr10	3308669	3308756	(130488666)	+	MLT1A	LTR/ERVL-MaLR	1	94	(280)	374915
1418	23.9	7.3	3.2	chr10	3308762	3309167	(130488255)	+	MER70A	LTR/ERVL	13	436	(36)	374916
1971	20.9	7.7	0.2	chr10	6686893	6687334	(127110088)	C	MER70B	LTR/ERVL	(100)	478	1	379900
315	27.1	7.2	7.6	chr10	7827202	7827373	(125970049)	+	MIRb	SINE/MIR	69	232	(30)	381680
1506	12.3	6.5	2.0	chr10	7827409	7827499	(125969923)	+	AluJo	SINE/Alu	34	133	(179)	381681
2547	6.8	0.3	0.0	chr10	7827500	7827808	(125969614)	+	AluY	SINE/Alu	1	310	(1)	381682
2061	13.9	0.7	0.3	chr10	9391473	9391766	(124405656)	+	AluSz	SINE/Alu	1	295	(17)	384210
3974	15.6	1.9	3.2	chr10	9391813	9392554	(124404868)	C	MER50	LTR/ERV1	(2)	732	1	384211
2070	8.0	0.0	0.0	chr10	12787720	12787970	(121009452)	+	AluSg	SINE/Alu	1	251	(59)	389574
1040	25.5	10.3	3.5	chr10	16219956	16220407	(117577015)	+	MLT1D	LTR/ERVL-MaLR	1	486	(19)	395406
511	27.2	13.3	2.6	chr10	16220428	16221069	(117576353)	C	L1ME3C	LINE/L1	(1549)	4597	3877	395404
1143	25.4	16.6	3.0	chr10	17547159	17547392	(116250030)	+	MER20B	DNA/hAT-Charlie	1	269	(514)	397601
2781	17.8	7.0	1.7	chr10	17547393	17547652	(116249770)	C	MER41D	LTR/ERV1	(0)	557	267	397602
343	22.2	0.0	0.0	chr10	22699241	22699303	(111098119)	C	Tigger16b	DNA/TcMar-Tigger	(0)	336	274	405651
2430	17.3	4.1	0.9	chr10	28963826	28964275	(104833147)	+	MER70A	LTR/ERVL	1	465	(7)	416045
6384	14.4	3.9	1.0	chr10	31961082	31962010	(101835412)	C	MER50-int	LTR/ERV1	(6251)	954	1	421053
4383	13.7	2.1	2.9	chr10	31962094	31962164	(101835258)	C	MER50	LTR/ERV1	(23)	711	648	421053
2384	10.8	0.0	0.0	chr10	31962165	31962469	(101834953)	C	AluSx1	SINE/Alu	(7)	305	1	421055
3969	6.0	1.4	1.7	chr10	42654447	42654969	(91142453)	+	HERV1_LTRa	LTR/ERV1	1	521	(0)	432346
2341	19.4	1.0	1.7	chr10	42770519	42770873	(91026549)	C	MER70B	LTR/ERVL	(177)	401	49	432527
814	25.1	16.2	0.6	chr10	72170138	72170465	(61626957)	+	L1MC4a	LINE/L1	7200	7588	(454)	476659
736	15.3	11.0	2.7	chr10	72170472	72170621	(61626801)	+	AluJo	SINE/Alu	147	310	(2)	476663
634	23.2	6.8	4.3	chr10	72170625	72170809	(61626613)	+	L1MC4a	LINE/L1	7580	7769	(273)	476659
290	33.7	11.7	2.5	chr10	74872180	74872380	(58925042)	+	L3	LINE/CR1	3871	4092	(7)	482039
1802	19.0	0.3	1.0	chr10	74872382	74872676	(58924746)	C	AluJb	SINE/Alu	(18)	294	2	482040
34004	6.3	0.6	1.1	chr10	84119049	84122689	(49674733)	C	HERVIP10FH-int	LTR/ERV1	(0)	5102	1463	496356
5811	20.7	3.5	1.1	chr10	85080391	85080791	(48716631)	+	L1MC3	LINE/L1	6203	6609	(1176)	497688
1780	18.8	0.0	1.3	chr10	85080794	85081105	(48716317)	+	MER2B	DNA/TcMar-Tigger	29	336	(0)	497690
1699	19.2	1.9	6.0	chr10	85081106	85081488	(48715934)	+	L1MC3	LINE/L1	6644	7010	(775)	497688
49	2.2	0.0	0.0	chr10	101267068	101267113	(32530309)	+	(CA)n	Simple_repeat	1	46	(0)	524770
743	20.1	3.0	0.2	chr10	123254330	123255943	(10541479)	+	(CAC)n	Simple_repeat	1	1663	(0)	560024
1979	13.5	1.0	0.7	chr10	125041087	125041382	(8756040)	C	AluJb	SINE/Alu	(15)	297	1	562927
545	30.6	1.6	1.0	chr10	130924924	130926843	(2870579)	+	(TG)n	Simple_repeat	1	1951	(0)	570050
1364	24.1	7.9	12.8	chr10	131108105	131108598	(2688824)	+	MER70A	LTR/ERVL	5	472	(0)	570244
101	23.0	6.5	5.3	chr10	132364294	132364784	(1432638)	+	(CACTCA)n	Simple_repeat	1	557	(29)	571577
13	23.5	0.0	0.0	chr10	132364785	132364819	(1432603)	+	(CCCA)n	Simple_repeat	1	35	(0)	571578
101	23.0	6.5	5.3	chr10	132364820	132364843	(1432579)	+	(CACTCA)n	Simple_repeat	558	586	(0)	571577
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
4374	15.0	1.4	1.5	chr11	10004952	10005674	(125080948)	+	MER50	LTR/ERV1	1	722	(12)	586915
13196	16.0	5.5	1.8	chr11	10005711	10009081	(125077541)	+	MER50-int	LTR/ERV1	1	3362	(3843)	586915
5522	19.0	7.3	1.5	chr11	16647483	16648655	(118437967)	+	L1PB1	LINE/L1	1	1246	(5617)	597266
2411	19.6	3.4	1.5	chr11	45337873	45338339	(89748283)	C	MER70B	LTR/ERVL	(102)	476	1	641906
4311	32.3	4.7	3.1	chr11	50041136	50044870	(85041752)	+	MER66-int	LTR/ERV1	2564	6176	(1580)	649818
2223	6.3	5.6	0.0	chr11	57350297	57350581	(77736041)	C	AluY	SINE/Alu	(9)	302	1	653507
481	30.6	5.5	0.0	chr11	64504737	64504909	(70581713)	C	L2	LINE/L2	(646)	2773	2591	665756
279	23.5	8.1	1.0	chr11	64504910	64505003	(70581619)	C	LTR16A2	LTR/ERVL	(2)	493	392	665757
1805	23.0	4.3	0.9	chr11	64505004	64505433	(70581189)	+	MER70B	LTR/ERVL	1	445	(133)	665758
5492	12.9	2.8	4.6	chr11	67572535	67573506	(67513116)	+	LTR13_	LTR/ERVK	1	954	(0)	671912
6398	15.3	2.3	2.6	chr11	67573507	67574089	(67512533)	+	LTR49-int	LTR/ERV1	5220	5842	(916)	671898
5525	12.1	3.0	1.8	chr11	68102124	68102875	(66983747)	+	L1MA6	LINE/L1	4560	5325	(818)	672754
1133	19.9	2.8	6.5	chr11	68102888	68103148	(66983474)	+	AluJo	SINE/Alu	43	293	(19)	672757
260	12.2	2.0	0.0	chr11	68103152	68103200	(66983422)	+	L1MA6	LINE/L1	5325	5374	(926)	672754
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
2450	20.2	4.5	0.0	chr11	70615287	70615737	(64470885)	+	MER70A	LTR/ERVL	1	472	(0)	677103
257	34.7	3.0	3.5	chr11	70615763	70615962	(64470660)	+	LTR79	LTR/ERVL	328	526	(1)	677104
2126	12.7	0.7	1.6	chr11	73745848	73746020	(61340602)	+	AluSz	SINE/Alu	135	305	(7)	682567
552	18.5	6.6	5.3	chr11	73746027	73746178	(61340444)	+	FLAM_C	SINE/Alu	2	298	(4)	682569
871	21.6	1.1	1.7	chr11	73746339	73746517	(61340105)	+	AluJb	SINE/Alu	113	290	(22)	682569
12	14.6	0.0	5.9	chr11	78439824	78439857	(56646765)	+	A-rich	Low_complexity	1	34	(0)	692026
2435	9.6	0.3	0.0	chr11	78440073	78440363	(56646259)	C	AluSz	SINE/Alu	(20)	292	1	692027
488	32.7	6.1	2.8	chr11	87251083	87251368	(47835254)	C	L2	LINE/L2	(960)	2459	2164	706855
366	29.7	4.1	1.9	chr11	87251390	87251536	(47835086)	+	MIR	SINE/MIR	51	199	(69)	706856
1715	26.7	6.7	5.2	chr11	88607208	88607817	(46478805)	+	L2a	LINE/L2	2471	3086	(340)	708850
2490	18.2	4.7	0.0	chr11	88607818	88608267	(46478355)	+	MER70A	LTR/ERVL	1	472	(0)	708851
2139	14.9	1.9	1.6	chr11	98595856	98596229	(36490393)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	722711
27666	3.6	0.1	0.1	chr11	113656607	113662757	(21423865)	+	L1PA3	LINE/L1	1	6153	(2)	744946
1249	18.8	2.2	1.8	chr11	113662792	113663018	(21423604)	C	Charlie1a	DNA/hAT-Charlie	(1227)	228	1	744942
301	26.5	0.0	1.4	chr11	113663125	113663193	(21423429)	+	MER115	DNA/hAT-Tip100	1	68	(625)	744947
305	26.8	8.9	5.0	chr11	115528214	115528259	(19558363)	+	L2a	LINE/L2	3258	3304	(122)	747762
2950	16.4	0.4	0.2	chr11	115528260	115528729	(19557893)	+	MER70A	LTR/ERVL	2	472	(0)	747763
305	26.8	8.9	5.0	chr11	115528730	115528843	(19557779)	+	L2a	LINE/L2	3305	3425	(1)	747762
1629	17.3	1.9	5.3	chr11	117085104	117085426	(18001196)	C	AluJr4	SINE/Alu	(0)	312	1	750490
1130	18.6	3.4	2.6	chr11	117085445	117085676	(18000946)	+	L1MC5	LINE/L1	9055	9288	(16)	750491
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
530	22.6	2.5	0.9	chr12	5773755	5773870	(127501439)	C	MER91A	DNA/hAT-Tip100	(78)	118	1	787503
200	33.3	1.4	0.0	chr12	5773917	5773985	(127501324)	+	MIRc	SINE/MIR	168	237	(31)	787504
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
1748	18.6	0.6	2.2	chr12	17169316	17169632	(116105677)	+	AluJb	SINE/Alu	1	312	(0)	805187
447	19.6	10.1	2.2	chr12	19520677	19520777	(113754532)	+	MER58A	DNA/hAT-Charlie	76	189	(35)	808356
2146	14.6	1.4	0.3	chr12	19520778	19521134	(113754175)	+	Tigger4b	DNA/TcMar-Tigger	1	361	(0)	808357
1379	26.1	11.7	6.0	chr12	20004006	20004461	(113270848)	+	MLT1H	LTR/ERVL-MaLR	53	555	(0)	809076
56	0.0	0.0	0.0	chr12	26038609	26038656	(107236653)	+	(AC)n	Simple_repeat	1	48	(0)	817412
1957	16.8	0.7	0.7	chr12	32301493	32301796	(100973513)	+	AluJb	SINE/Alu	1	304	(8)	827231
553	27.3	1.5	6.6	chr12	32301805	32301878	(100973431)	C	MER102a	DNA/hAT-Charlie	(105)	225	159	827232
2473	8.5	0.0	0.0	chr12	32301879	32302185	(100973124)	C	AluY	SINE/Alu	(4)	307	1	827233
2320	23.2	7.4	0.8	chr12	41927830	41928456	(91346853)	+	L1MEc	LINE/L1	93	764	(5636)	835702
1820	17.2	5.1	2.0	chr12	42884225	42884526	(90390783)	C	AluJo	SINE/Alu	(0)	312	1	837324
335	25.7	5.6	2.6	chr12	45263027	45263182	(88012127)	C	L1ME4a	LINE/L1	(342)	5782	5622	840577
1464	19.0	4.8	4.8	chr12	45263217	45263511	(88011798)	C	AluJr	SINE/Alu	(17)	295	1	840581
1639	8.0	12.8	4.2	chr12	49265873	49266134	(84009175)	+	AluSx3	SINE/Alu	1	288	(23)	846830
2495	4.7	0.3	1.7	chr12	49266144	49266443	(84008866)	+	AluY	SINE/Alu	1	296	(15)	846831
317	27.1	8.6	0.0	chr12	50224640	50224735	(83050574)	+	L1ME4a	LINE/L1	5822	5926	(198)	848692
1077	15.2	0.0	1.3	chr12	50224738	50224895	(83050414)	C	FRAM	SINE/Alu	(20)	156	1	848693
2472	8.2	0.3	0.0	chr12	50224897	50225201	(83050108)	C	AluSp	SINE/Alu	(7)	306	1	848694
1777	13.9	0.7	5.2	chr12	55682527	55682813	(77592496)	+	AluJo	SINE/Alu	39	312	(0)	858069
7037	12.8	6.9	1.8	chr12	56835485	56837237	(76438072)	C	MER50-int	LTR/ERV1	(5362)	1843	1	860347
4015	15.4	4.2	1.0	chr12	56837279	56837966	(76437343)	C	MER50	LTR/ERV1	(23)	711	1	860347
2201	11.5	12.4	1.6	chr12	65725390	65725426	(67549883)	+	MSTA	LTR/ERVL-MaLR	393	427	(1)	873229
24420	6.7	0.8	0.2	chr12	67405263	67409669	(65865640)	+	L1PA6	LINE/L1	1728	6141	(13)	875863
35	2.3	4.5	0.0	chr12	67409670	67409713	(65865596)	+	(AATA)n	Simple_repeat	1	46	(0)	875864
372	29.7	1.2	5.7	chr12	67409716	67409890	(65865419)	+	MER103C	DNA/hAT-Charlie	62	228	(69)	875865
2546	10.3	0.3	0.0	chr12	67409893	67410203	(65865106)	+	AluSp	SINE/Alu	2	313	(0)	875866
567	23.5	8.9	3.5	chr12	80972673	80972928	(52302381)	+	LTR37B	LTR/ERV1	198	468	(0)	895777
2880	25.2	7.0	3.2	chr12	80972993	80973821	(52301488)	C	Zaphod	DNA/hAT-Tip100	(0)	4031	3156	895778
561	28.6	13.5	0.9	chr12	82359291	82359625	(50915684)	C	L2	LINE/L2	(357)	3062	2679	897654
1843	23.3	2.2	1.3	chr12	83253046	83253441	(50021868)	+	MER70A	LTR/ERVL	73	472	(0)	898867
653	20.8	7.8	8.2	chr12	87347349	87347568	(45927741)	+	MER20	DNA/hAT-Charlie	1	219	(0)	904125
555	28.7	5.1	5.1	chr12	87347569	87347670	(45927639)	C	MLT1J2	LTR/ERVL-MaLR	(185)	263	157	904124
618	27.8	8.9	1.7	chr12	87347676	87348019	(45927290)	+	L1MEd	LINE/L1	5274	5644	(598)	904122
1985	21.4	4.9	2.4	chr12	103455899	103456358	(29818951)	C	MER70A	LTR/ERVL	(0)	472	1	930691
5987	21.7	5.7	3.9	chr12	104201073	104201957	(29073352)	C	L1MA4	LINE/L1	(4319)	2246	1327	932048
36	2.7	0.0	0.0	chr12	113080590	113080627	(20194682)	+	(GAATG)n	Simple_repeat	1	38	(0)	950746
12	8.7	0.0	3.6	chr12	113080628	113080649	(20194660)	+	(GAATA)n	Simple_repeat	1	21	(0)	950747
30	0.0	0.0	0.0	chr12	121590899	121590926	(11684383)	+	(T)n	Simple_repeat	1	28	(0)	969746
621	30.0	2.3	0.0	chr12	132267481	132267690	(1007619)	+	L1M5	LINE/L1	4603	4817	(1329)	989279
1217	30.4	3.8	0.7	chr12	132268352	132268991	(1006318)	+	L1M5	LINE/L1	4946	5606	(573)	989279
2275	8.4	0.0	0.7	chr13	20774171	20774466	(93589862)	+	AluSx	SINE/Alu	1	294	(18)	994840
527	23.9	12.6	1.9	chr13	27131290	27131451	(87232877)	+	MIRc	SINE/MIR	71	252	(16)	1004365
232	37.5	9.2	1.8	chr13	36738493	36738663	(77625665)	C	L2	LINE/L2	(2521)	898	714	1018987
1555	19.2	0.0	3.3	chr13	40575050	40575325	(73789003)	+	AluJo	SINE/Alu	1	267	(45)	1024333
4433	14.7	2.8	0.4	chr13	43995229	43995933	(70368395)	C	MER50	LTR/ERV1	(12)	722	1	1029632
1800	21.6	6.7	4.6	chr13	66224563	66225061	(48139267)	C	MER67D	LTR/ERV1	(4)	510	1	1060777
466	28.2	11.7	5.8	chr13	66225062	66225158	(48139170)	+	MER20B	DNA/hAT-Charlie	152	276	(507)	1060776
2358	14.7	6.7	1.5	chr13	66225159	66225567	(48138761)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1060778
633	31.6	4.9	5.3	chr13	70203162	70203757	(44160571)	+	L1ME3D	LINE/L1	5468	6080	(162)	1065828
1042	25.5	12.0	0.9	chr13	70203758	70204074	(44160254)	+	LTR18A	LTR/ERVL	1	357	(0)	1065829
343	36.0	4.9	1.8	chr13	70249228	70249445	(44114883)	C	L2a	LINE/L2	(180)	3246	3022	1065893
430	19.5	0.0	2.5	chr13	70249450	70249528	(44114800)	+	MER70B	LTR/ERVL	83	159	(419)	1065894
1841	26.2	3.3	1.2	chr13	70249528	70250006	(44114322)	+	MER70B	LTR/ERVL	90	578	(0)	1065895
24	19.9	3.3	0.0	chr13	71678586	71678645	(42685683)	+	(CTTC)n	Simple_repeat	1	62	(0)	1067759
1763	18.8	0.3	1.0	chr13	71678651	71678958	(42685370)	C	AluJr4	SINE/Alu	(6)	306	1	1067760
408	33.0	2.1	3.2	chr13	73090916	73091035	(41273293)	C	L1M5	LINE/L1	(332)	5792	5675	1069896
6460	21.2	7.3	4.0	chr13	75081651	75082103	(39282225)	+	L1M4	LINE/L1	562	1047	(6470)	1072814
1677	21.1	0.0	1.0	chr13	75082104	75082407	(39281921)	C	AluJb	SINE/Alu	(11)	301	1	1072816
3024	19.0	3.0	7.3	chr13	80976152	80976874	(33387454)	+	LTR8	LTR/ERV1	1	691	(0)	1080963
21	7.1	0.0	3.1	chr13	83883192	83883238	(30481090)	+	(CA)n	Simple_repeat	1	45	(0)	1084514
1366	13.4	0.0	0.0	chr13	84350933	84351118	(30013210)	+	AluSx1	SINE/Alu	1	186	(126)	1085133
1640	27.1	2.8	0.5	chr13	84351152	84351573	(30012755)	C	MER70B	LTR/ERVL	(143)	435	4	1085134
1179	19.4	3.8	2.4	chr13	84351578	84352188	(30012140)	C	MER92-int	LTR/ERV1	(3433)	1503	652	1085131
20	0.0	11.4	0.0	chr13	84817099	84817133	(29547195)	+	(ACA)n	Simple_repeat	1	39	(0)	1085728
394	29.3	10.8	4.6	chr13	84858164	84858359	(29505969)	C	L1MEc	LINE/L1	(5170)	1230	1032	1085781
1808	19.5	0.0	0.0	chr13	84858360	84858661	(29505667)	C	AluJb	SINE/Alu	(9)	303	2	1085782
394	29.3	10.8	4.6	chr13	84858662	84859029	(29505299)	C	L1MEc	LINE/L1	(5369)	1031	627	1085781
1751	18.2	1.7	1.7	chr13	95276132	95276433	(19087895)	+	AluJr	SINE/Alu	1	302	(10)	1099686
682	14.6	0.0	0.0	chr13	95276439	95276534	(19087794)	+	AluJb	SINE/Alu	215	310	(2)	1099687
7839	6.8	0.2	0.2	chr13	95316840	95317805	(19046523)	+	LTR13A	LTR/ERVK	1	966	(0)	1099802
1219	16.7	7.5	7.8	chr13	100728058	100728109	(13636219)	C	L1ME3A	LINE/L1	(199)	5974	5928	1108400
2437	18.4	3.8	7.0	chr13	100728110	100728595	(13635733)	C	MER70A	LTR/ERVL	(0)	472	3	1108402
1219	16.7	7.5	7.8	chr13	100728596	100728653	(13635675)	C	L1ME3A	LINE/L1	(246)	5927	5854	1108400
1213	22.2	4.8	5.7	chr13	100728660	100729138	(13635190)	C	Charlie2b	DNA/hAT-Charlie	(149)	2633	2160	1108396
2103	23.8	1.3	0.4	chr13	103297026	103297493	(11066835)	C	MER70A	LTR/ERVL	(0)	472	1	1111989
2560	5.7	0.0	0.3	chr14	28940511	28940806	(78102912)	C	AluY	SINE/Alu	(15)	296	2	1139916
2327	10.4	0.7	0.0	chr14	28941006	28941314	(78102404)	C	AluSc8	SINE/Alu	(0)	311	1	1139917
1502	15.3	10.9	3.5	chr14	34994769	34994932	(72048786)	C	AluJr	SINE/Alu	(1)	311	135	1149119
28	0.0	0.0	0.0	chr14	34994933	34994959	(72048759)	+	(T)n	Simple_repeat	1	27	(0)	1149120
1502	15.3	10.9	3.5	chr14	34994960	34995081	(72048637)	C	AluJr	SINE/Alu	(178)	134	1	1149119
17	13.1	0.0	0.0	chr14	34995082	34995107	(72048611)	+	(T)n	Simple_repeat	1	26	(0)	1149121
1455	18.2	7.1	4.4	chr14	34995110	34995134	(72048584)	C	MLT2B4	LTR/ERVL	(13)	543	524	1149122
63	0.0	0.0	0.0	chr14	34995135	34995188	(72048530)	+	(GT)n	Simple_repeat	1	54	(0)	1149123
1419	26.6	4.2	2.4	chr14	46334065	46334483	(60709235)	C	MER70B	LTR/ERVL	(148)	430	4	1164159
1993	28.1	9.4	2.0	chr14	46334494	46335305	(60708413)	+	Arthur1	DNA/hAT-Tip100	196	1074	(2873)	1164160
592	32.2	6.4	0.7	chr14	59807606	59807914	(47235804)	+	LTR78	LTR/ERV1	969	1296	(8)	1184200
3191	11.7	5.7	0.2	chr14	59807947	59808476	(47235242)	+	LTR24B	LTR/ERV1	9	569	(7)	1184201
437	34.3	3.4	2.9	chr14	62338631	62338837	(44704881)	C	MIR	SINE/MIR	(53)	209	2	1187797
2289	10.6	0.0	1.0	chr14	64744772	64745074	(42298644)	C	AluSx3	SINE/Alu	(10)	301	2	1191846
5350	15.3	3.4	3.1	chr14	73610591	73610697	(33433021)	+	MER70-int	LTR/ERVL	4919	5022	(1)	1206669
2638	15.9	6.8	1.4	chr14	73610704	73611149	(33432569)	+	MER70A	LTR/ERVL	1	472	(0)	1206669
4284	15.7	3.3	0.8	chr14	76687591	76688292	(30355426)	+	MER50	LTR/ERV1	3	722	(12)	1212769
2289	18.4	0.9	1.4	chr14	76688330	76688927	(30354791)	C	L1MD	LINE/L1	(570)	5672	5076	1212770
278	28.3	13.7	0.8	chr14	77052242	77052362	(29991356)	C	MIRb	SINE/MIR	(126)	142	4	1213511
2164	21.8	7.6	0.0	chr14	79653748	79654183	(27389535)	C	MER70A	LTR/ERVL	(0)	472	1	1218131
2448	21.6	5.7	4.2	chr14	88914032	88914600	(18129118)	C	MER70B	LTR/ERVL	(0)	578	1	1231186
3029	25.9	11.9	5.0	chr14	88914601	88914858	(18128860)	C	L2a	LINE/L2	(1673)	1746	1457	1231181
1182	17.8	7.5	0.0	chr14	94648579	94648786	(12394932)	C	AluJb	SINE/Alu	(1)	311	87	1241489
722	23.8	4.6	0.5	chr14	94648790	94648975	(12394743)	C	MSTB1	LTR/ERVL-MaLR	(230)	196	3	1241488
1416	13.4	0.9	1.8	chr14	94648986	94649213	(12394505)	C	MER70A	LTR/ERVL	(352)	226	1	1241487
1772	11.8	11.2	0.0	chr14	97109039	97109308	(9934410)	+	AluSx1	SINE/Alu	1	304	(8)	1246105
2095	20.4	4.2	2.8	chr14	97109309	97109693	(9934025)	+	MER70A	LTR/ERVL	83	472	(0)	1246104
339	31.4	13.0	4.6	chr14	100526401	100526610	(6517108)	+	MIRb	SINE/MIR	4	233	(35)	1252010
151	40.6	0.9	0.7	chr14	100526641	100527377	(6516341)	+	(ACC)n	Simple_repeat	1	744	(0)	1252011
31	23.7	3.6	0.0	chr14	102992735	102992818	(4050900)	+	(AT)n	Simple_repeat	1	87	(0)	1256007
2083	11.9	0.0	1.0	chr14	102992819	102993129	(4050589)	C	AluSz6	SINE/Alu	(4)	308	1	1256008
2163	11.0	1.6	0.3	chr15	22788981	22789289	(79201900)	C	AluSq2	SINE/Alu	(0)	313	1	1266296
1894	15.9	2.4	1.5	chr15	22789345	22789670	(79201519)	C	MER50-int	LTR/ERV1	(6870)	335	7	1266297
1267	13.6	2.7	4.5	chr15	22789671	22789802	(79201387)	C	MER50	LTR/ERV1	(12)	722	589	1266297
2130	12.2	0.3	0.0	chr15	22789803	22790089	(79201100)	C	AluSx	SINE/Alu	(20)	292	5	1266298
2479	19.5	1.5	2.1	chr15	35914552	35915023	(66076166)	+	MER70A	LTR/ERVL	4	472	(0)	1284994
183	36.8	9.0	0.6	chr15	35980566	35980748	(66010441)	C	L2c	LINE/L2	(241)	3146	2947	1285090
259	22.8	0.0	19.2	chr15	35980992	35981116	(66010073)	C	MIRc	SINE/MIR	(15)	253	153	1285091
1476	20.6	0.7	6.2	chr15	50678748	50678884	(51312305)	+	AluJb	SINE/Alu	1	133	(179)	1308275
2344	7.7	0.0	0.3	chr15	50678885	50679171	(51312018)	C	AluSc	SINE/Alu	(23)	286	1	1308276
1476	20.6	0.7	6.2	chr15	50679172	50679353	(51311836)	+	AluJb	SINE/Alu	134	302	(10)	1308275
1686	14.7	3.8	1.1	chr15	65105034	65105189	(36886000)	+	AluJr	SINE/Alu	135	293	(19)	1331894
1855	16.2	0.0	2.6	chr15	65105193	65105495	(36885694)	+	AluJb	SINE/Alu	1	295	(17)	1331896
1352	12.3	1.7	0.0	chr15	65789874	65790044	(36201145)	+	AluJo	SINE/Alu	1	174	(138)	1333343
612	30.3	12.9	1.1	chr15	70680886	70681297	(31309892)	+	L2a	LINE/L2	2872	3421	(5)	1342570
2588	17.6	1.7	4.4	chr15	72817766	72818157	(29173032)	C	MER70B	LTR/ERVL	(109)	469	70	1346146
2389	9.7	0.0	0.0	chr15	72818158	72818457	(29172732)	C	AluSz	SINE/Alu	(12)	300	1	1346147
1555	17.3	8.4	0.0	chr15	75627635	75627905	(26363284)	+	AluJb	SINE/Alu	1	296	(16)	1351241
2448	7.8	0.0	0.0	chr15	75628077	75628372	(26362817)	+	AluSc	SINE/Alu	1	296	(13)	1351242
185	35.2	3.3	3.3	chr15	77699788	77699878	(24291311)	+	L2c	LINE/L2	3293	3383	(4)	1354494
7190	7.6	4.1	0.1	chr15	78902313	78903239	(23087950)	C	LTR13A	LTR/ERVK	(0)	966	1	1356838
2614	18.9	0.4	6.6	chr15	81046264	81046639	(20944550)	C	MER70A	LTR/ERVL	(0)	472	103	1360600
1897	17.1	0.0	2.2	chr15	81046640	81046955	(20944234)	+	AluJr4	SINE/Alu	2	310	(2)	1360601
1758	15.1	6.4	0.4	chr15	86155186	86155464	(15835725)	+	AluJb	SINE/Alu	1	297	(15)	1369009
1781	14.6	3.7	3.4	chr16	2302487	2302780	(88035565)	C	AluJb	SINE/Alu	(13)	299	5	1397171
2268	8.8	0.0	3.3	chr16	2302793	2303098	(88035247)	C	AluSx1	SINE/Alu	(16)	296	1	1397172
64	12.6	0.8	3.2	chr16	5500073	5500194	(84838151)	+	(CCTC)n	Simple_repeat	1	123	(0)	1403414
35	11.0	0.0	0.0	chr16	5500196	5500255	(84838090)	+	(CATTC)n	Simple_repeat	1	60	(0)	1403415
1598	17.6	0.8	0.4	chr16	5500260	5500521	(84837824)	C	AluJr	SINE/Alu	(49)	263	1	1403416
310	9.1	0.0	0.0	chr16	8573522	8573565	(81764780)	C	L4_B_Mam	LINE/RTE-X	(203)	4738	4695	1409309
270	25.8	11.9	7.4	chr16	11246358	11246410	(79091935)	C	MIRc	SINE/MIR	(3)	265	212	1415224
1894	14.7	1.6	4.5	chr16	11246411	11246724	(79091621)	C	AluJb	SINE/Alu	(7)	305	1	1415225
301	22.4	5.2	7.4	chr16	11246725	11246846	(79091499)	C	MIRb	SINE/MIR	(57)	211	82	1415224
626	27.1	1.4	5.3	chr16	11246847	11247072	(79091273)	+	MER113	DNA/hAT-Charlie	1	217	(304)	1415226
2846	16.2	2.1	0.0	chr16	13359767	13360228	(76978117)	C	MER70A	LTR/ERVL	(0)	472	1	1419933
1374	28.3	8.0	4.1	chr16	13360229	13360326	(76978019)	+	LTR16E1	LTR/ERVL	37	162	(376)	1419932
1093	14.2	16.1	3.1	chr16	21948710	21948885	(68389460)	C	MER4A	LTR/ERV1	(3)	762	593	1438979
1399	17.6	9.5	0.0	chr16	21948886	21949141	(68389204)	+	AluJr	SINE/Alu	26	308	(4)	1438980
1093	21.0	10.7	6.7	chr16	21949142	21949399	(68388946)	C	MER4A	LTR/ERV1	(173)	592	325	1438979
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
377	20.6	0.0	0.0	chr16	34063794	34063861	(56274484)	+	AluYj4	SINE/Alu	224	291	(20)	1463563
318	21.8	0.0	0.0	chr16	34066270	34066324	(56272021)	+	AluYj4	SINE/Alu	224	278	(33)	1463572
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
26	2.1	7.5	3.5	chr16	34699521	34699573	(55638772)	+	(TGATGATTCCAT)n	Simple_repeat	1	57	(0)	1464055
2289	18.8	2.5	9.5	chr16	46480209	46480919	(43857426)	+	L1M2	LINE/L1	3939	4603	(1540)	1465525
251	30.4	3.3	14.4	chr16	47890165	47890337	(42448008)	C	L2c	LINE/L2	(181)	3206	3054	1467777
243	25.6	15.5	2.3	chr16	47890354	47890481	(42447864)	+	MIR3	SINE/MIR	48	195	(13)	1467781
2427	19.9	2.7	0.0	chr16	66239265	66239727	(24098618)	C	MER70B	LTR/ERVL	(102)	476	1	1499344
1171	11.2	0.0	0.0	chr16	66398586	66398746	(23939599)	+	AluJo	SINE/Alu	137	297	(15)	1499660
21	6.0	0.0	5.1	chr16	68539679	68539717	(21798628)	+	(GGGGC)n	Simple_repeat	1	39	(0)	1503727
12	4.7	0.0	7.7	chr16	68539854	68539879	(21798466)	+	(CATC)n	Simple_repeat	1	26	(0)	1503728
2261	17.9	5.1	4.3	chr16	71198405	71198872	(19139473)	+	MER70A	LTR/ERVL	1	472	(0)	1509265
1926	18.0	8.5	3.4	chr16	74836054	74836224	(15502121)	C	MLT1D	LTR/ERVL-MaLR	(311)	194	24	1515537
2455	18.9	4.6	1.3	chr16	74836235	74836606	(15501739)	+	MER70B	LTR/ERVL	1	391	(187)	1515539
18	28.0	4.9	2.3	chr16	81061028	81061109	(9277236)	+	GA-rich	Low_complexity	1	86	(0)	1526393
847	27.0	12.8	2.5	chr16	86614815	86615171	(3723174)	C	MLT1I	LTR/ERVL-MaLR	(1)	410	12	1536948
276	14.3	10.0	0.0	chr17	1895228	1895290	(81362151)	C	MIR	SINE/MIR	(102)	160	91	1548052
1081	18.0	0.0	12.0	chr17	4910647	4910896	(78346545)	+	AluJr	SINE/Alu	1	220	(92)	1554033
17	9.1	0.0	0.0	chr17	4910900	4910923	(78346518)	+	(A)n	Simple_repeat	1	24	(0)	1554034
13	23.4	2.4	0.0	chr17	4911344	4911384	(78346057)	+	G-rich	Low_complexity	1	42	(0)	1554035
257	31.6	9.4	6.9	chr17	13736395	13736714	(69520727)	+	HERV16-int	LTR/ERVL	345	673	(4323)	1570263
545	25.2	1.8	0.0	chr17	13736790	13736900	(69520541)	+	MER81	DNA/hAT-Blackjack	2	114	(0)	1570264
333	23.8	2.3	2.3	chr17	17941615	17941700	(65315741)	+	MIRb	SINE/MIR	4	89	(179)	1577618
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
354	19.1	1.6	0.0	chr17	26879386	26879448	(56377993)	+	AluYj4	SINE/Alu	224	287	(24)	1585979
14076	21.5	0.2	0.1	chr17	26879448	26880125	(56377316)	+	(TGGAA)n	Simple_repeat	1	678	(0)	1585980
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26935986	26936392	(56321049)	+	(GAATG)n	Satellite	1	409	(0)	1585984
411	16.2	4.2	0.0	chr17	26936393	26936460	(56320981)	+	AluYj4	SINE/Alu	224	294	(17)	1585985
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
192	33.7	0.0	9.5	chr17	33503089	33503183	(49754258)	+	MIRc	SINE/MIR	171	256	(12)	1598788
2342	9.1	0.0	2.6	chr17	38387769	38388077	(44869364)	C	AluSx	SINE/Alu	(11)	301	1	1607765
342	18.8	2.0	14.8	chr17	38388078	38388164	(44869277)	C	HAL1M8	LINE/L1	(502)	2489	2401	1607764
13	15.5	0.0	3.2	chr17	38388172	38388202	(44869239)	+	(TTCC)n	Simple_repeat	1	31	(0)	1607766
2825	14.9	4.7	3.7	chr17	38388208	38388271	(44869170)	C	L1MB7	LINE/L1	(9)	6175	6123	1607767
1498	16.8	0.0	4.2	chr17	38388272	38388533	(44868908)	+	AluSz6	SINE/Alu	44	294	(18)	1607768
644	21.9	12.9	3.7	chr17	39812389	39812578	(43444863)	C	MER63A	DNA/hAT-Blackjack	(0)	210	1	1610816
2280	9.9	0.0	2.5	chr17	39812817	39813104	(43444337)	+	AluY	SINE/Alu	1	284	(27)	1610817
2007	14.3	1.0	1.6	chr17	39845240	39845546	(43411895)	+	AluSx1	SINE/Alu	1	305	(7)	1610873
1375	17.4	5.6	4.3	chr17	39845547	39845707	(43411734)	+	MER58B	DNA/hAT-Charlie	192	341	(0)	1610872
379	30.2	9.3	0.2	chr17	49191589	49191799	(34065642)	C	L1ME4b	LINE/L1	(2222)	555	316	1629399
1625	21.4	1.2	1.2	chr17	50013064	50013385	(33244056)	+	MER70B	LTR/ERVL	3	324	(254)	1630990
2289	9.9	0.0	3.0	chr17	50013397	50013699	(33243742)	C	AluY	SINE/Alu	(17)	294	1	1630991
423	29.4	10.5	3.6	chr17	57743853	57744074	(25513367)	+	MIRb	SINE/MIR	2	240	(28)	1643758
332	27.6	14.1	7.9	chr17	57744177	57744506	(25512935)	+	Tigger15a	DNA/TcMar-Tigger	202	555	(160)	1643759
1808	15.3	0.7	0.7	chr17	58298812	58299101	(24958340)	+	MER70B	LTR/ERVL	1	290	(288)	1644794
352	29.4	9.5	8.8	chr17	58299102	58299313	(24958128)	C	L1M5	LINE/L1	(2161)	3985	3798	1644795
2244	9.9	0.7	0.3	chr17	58658388	58658680	(24598761)	C	AluSz	SINE/Alu	(8)	304	11	1645452
800	22.9	6.1	1.1	chr17	58658800	58658987	(24598454)	C	AluJr	SINE/Alu	(5)	307	110	1645453
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
292	31.7	1.1	4.7	chr17	59107090	59107281	(24150160)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	1646446
2231	10.5	0.0	0.0	chr17	59289475	59289760	(23967681)	+	AluSx	SINE/Alu	1	286	(26)	1646913
18	7.5	0.0	0.0	chr17	59289761	59289788	(23967653)	+	(TCAA)n	Simple_repeat	1	28	(0)	1646914
5602	9.5	3.5	2.8	chr17	59290107	59290917	(23966524)	C	LTR5_Hs	LTR/ERVK	(151)	817	1	1646915
346	23.9	7.0	2.1	chr17	63203505	63203649	(20053792)	C	L1ME3Cz	LINE/L1	(766)	231	110	1654416
2623	19.3	7.0	6.6	chr17	63204136	63204483	(20052958)	+	L1MB4	LINE/L1	4278	4627	(1513)	1654417
26	6.3	0.0	0.0	chr17	71163513	71163545	(12093896)	+	(A)n	Simple_repeat	1	33	(0)	1668367
854	9.7	0.0	7.6	chr17	75033133	75033276	(8224165)	C	FLAM_C	SINE/Alu	(10)	133	1	1675211
491	30.8	8.6	4.2	chr17	75111848	75112259	(8145182)	C	L2a	LINE/L2	(2)	3424	2882	1675371
437	17.2	13.0	0.0	chr17	75112311	75112397	(8145044)	+	AluJo	SINE/Alu	150	249	(63)	1675372
294	11.6	0.0	0.0	chr17	75112390	75112432	(8145009)	+	FAM	SINE/Alu	98	140	(45)	1675373
531	13.0	4.2	1.1	chr17	75112442	75112534	(8144907)	C	L1MC3	LINE/L1	(532)	7253	7158	1675374
244	28.7	8.3	5.0	chr17	77629363	77629457	(5627984)	C	L1M5	LINE/L1	(1374)	4772	4668	1680351
102	1.0	2.0	0.0	chr17	77629465	77629565	(5627876)	+	(TATC)n	Simple_repeat	1	103	(0)	1680352
1599	17.5	9.2	0.4	chr17	77629566	77629826	(5627615)	C	AluJr	SINE/Alu	(24)	288	1	1680353
234	36.5	7.4	7.0	chr17	78997763	78997977	(4259464)	+	Tigger19b	DNA/TcMar-Tigger	49	264	(286)	1682832
361	15.8	6.9	1.8	chr17	80024286	80025222	(3232219)	+	(CA)n	Simple_repeat	1	1002	(0)	1684319
121	22.7	0.4	8.2	chr17	80929972	80930312	(2327129)	+	(CTCAG)n	Simple_repeat	1	313	(0)	1685673
32	10.5	0.0	6.5	chr17	80930313	80930405	(2327036)	+	(CAGCT)n	Simple_repeat	1	93	(0)	1685674
121	22.7	0.4	8.2	chr17	80930406	80930537	(2326904)	+	(CTCAG)n	Simple_repeat	4	127	(0)	1685675
170	12.3	6.9	1.0	chr17	81742179	81742539	(1514902)	+	(CA)n	Simple_repeat	1	386	(0)	1686732
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
540	3.0	2.1	1.6	chr18	10001	10631	(80362654)	+	(CCCTAA)n	Simple_repeat	1	644	(0)	1689081
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
200	2.8	7.2	2.7	chr18	4510685	4511029	(75862256)	+	(GTG)n	Simple_repeat	1	370	(0)	1696090
1309	17.3	0.0	0.9	chr18	8180024	8180239	(72193046)	C	MER50-int	LTR/ERV1	(6991)	214	1	1701039
339	20.0	0.0	0.0	chr18	8180240	8180282	(72193003)	C	MER50-int	LTR/ERV1	(7161)	44	2	1701039
4456	15.0	0.6	1.1	chr18	8180285	8180999	(72192286)	C	MER50	LTR/ERV1	(23)	711	1	1701039
20968	7.0	1.1	2.1	chr18	8877339	8881515	(71491770)	C	HERVIP10FH-int	LTR/ERV1	(2)	7735	687	1702053
1626	22.2	4.5	3.9	chr18	22674867	22675000	(57698285)	+	MER110A	LTR/ERV1	1	139	(329)	1714861
2860	18.5	2.5	0.2	chr18	22675001	22675461	(57697824)	+	MER70A	LTR/ERVL	1	472	(0)	1714862
1544	18.7	2.4	3.0	chr18	26809592	26809891	(53563394)	+	AluJb	SINE/Alu	1	298	(14)	1721547
251	28.6	8.3	1.3	chr18	26809960	26810037	(53563248)	+	L2c	LINE/L2	3292	3375	(12)	1721548
579	32.8	7.9	0.0	chr18	30687299	30687496	(49685789)	+	MIR	SINE/MIR	11	225	(37)	1726690
2439	19.6	2.0	0.4	chr18	30687499	30687948	(49685337)	+	MER70A	LTR/ERVL	2	458	(14)	1726691
752	24.9	9.6	0.0	chr18	30930316	30930540	(49442745)	C	MER58B	DNA/hAT-Charlie	(0)	341	93	1726972
363	34.8	2.1	0.0	chr18	33697244	33697381	(46675904)	C	L2a	LINE/L2	(4)	3422	3282	1731043
779	25.9	21.8	2.4	chr18	33697467	33697721	(46675564)	C	L1MEc	LINE/L1	(5665)	735	423	1731044
316	23.5	8.6	8.1	chr18	37778928	37779084	(42594201)	C	MIRc	SINE/MIR	(45)	163	9	1736519
212	25.8	15.1	6.3	chr18	50968315	50968488	(29404797)	+	MIRc	SINE/MIR	1	192	(76)	1756118
207	22.8	10.2	3.7	chr18	50968522	50968603	(29404682)	C	MER5B	DNA/hAT-Charlie	(4)	174	87	1756119
261	31.3	2.0	2.9	chr18	50968735	50968836	(29404449)	+	L2a	LINE/L2	3316	3416	(10)	1756120
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
1714	26.6	9.7	9.3	chr18	74617198	74618378	(5754907)	C	L1MC4	LINE/L1	(138)	7904	6719	1790144
45	12.0	2.7	6.1	chr18	74866739	74866850	(5506435)	+	(ATTTT)n	Simple_repeat	1	115	(0)	1790416
705	16.1	2.3	3.1	chr18	74866873	74867002	(5506283)	+	FLAM_A	SINE/Alu	4	132	(10)	1790417
1518	29.8	4.6	5.0	chr18	77423074	77423522	(2949763)	C	L1ME1	LINE/L1	(51)	6128	5691	1793480
302	25.6	12.2	2.8	chr18	78757518	78757658	(1615627)	C	L1MD	LINE/L1	(2918)	3228	3073	1794852
12	23.0	2.7	0.0	chr18	78757663	78757699	(1615586)	+	(TCTTTCC)n	Simple_repeat	1	38	(0)	1794853
15	23.0	4.3	0.0	chr18	78757700	78757705	(1615580)	+	(TCTT)n	Simple_repeat	5	49	(0)	1794854
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
864	12.9	0.0	0.8	chr19	1027393	1027524	(57590092)	+	FLAM_C	SINE/Alu	1	131	(12)	1798102
2405	10.2	3.0	4.6	chr19	1696098	1696167	(56921449)	+	THE1B	LTR/ERVL-MaLR	298	364	(0)	1799320
1608	19.1	0.7	3.4	chr19	1696168	1696322	(56921294)	+	AluJb	SINE/Alu	150	300	(12)	1799319
381	20.0	2.9	0.0	chr19	1696326	1696425	(56921191)	+	MER45B	DNA/hAT-Tip100	862	964	(76)	1799322
2090	12.1	3.5	1.9	chr19	1696426	1696732	(56920884)	C	AluSx	SINE/Alu	(0)	312	1	1799323
2361	9.2	0.3	2.2	chr19	8329205	8329520	(50288096)	+	AluSx	SINE/Alu	1	310	(2)	1815037
2171	18.6	1.0	0.5	chr19	8329522	8329921	(50287695)	+	MER70B	LTR/ERVL	73	474	(104)	1815038
402	32.9	10.2	0.6	chr19	8329952	8330296	(50287320)	C	L2	LINE/L2	(2630)	789	408	1815035
617	24.7	17.7	0.8	chr19	10552523	10552775	(48064841)	C	MLT1K	LTR/ERVL-MaLR	(118)	477	173	1820081
219	29.2	5.9	5.0	chr19	16197566	16197666	(42419950)	+	L2b	LINE/L2	3221	3322	(53)	1833390
20	12.9	2.3	2.2	chr19	17336295	17336338	(41281278)	+	A-rich	Low_complexity	1	45	(0)	1836057
1237	13.6	0.5	1.1	chr19	17336339	17336529	(41281087)	+	AluJb	SINE/Alu	120	309	(3)	1836058
2981	20.2	2.8	7.3	chr19	18705619	18706001	(39911615)	C	L1MB4	LINE/L1	(568)	5606	5264	1839419
1539	17.1	1.9	3.8	chr19	18706029	18706182	(39911434)	C	L1MB4	LINE/L1	(1194)	4946	4801	1839419
2134	10.9	0.0	0.7	chr19	18706183	18706506	(39911110)	C	AluSx1	SINE/Alu	(0)	312	1	1839421
522	25.1	7.6	4.7	chr19	23232922	23233164	(35384452)	+	L1MC4	LINE/L1	7243	7509	(533)	1846364
2048	11.5	0.0	4.7	chr19	30472910	30473205	(28144411)	+	AluSx	SINE/Alu	1	282	(30)	1851911
29	3.2	0.0	0.0	chr19	30473206	30473237	(28144379)	+	(ATA)n	Simple_repeat	1	32	(0)	1851912
2012	22.7	2.7	2.0	chr19	30473238	30473598	(28144018)	+	MER70A	LTR/ERVL	83	448	(24)	1851910
2447	9.2	0.0	0.0	chr19	47277191	47277495	(11340121)	C	AluSx1	SINE/Alu	(7)	305	1	1885720
1710	12.8	0.7	15.1	chr19	47277496	47277662	(11339954)	C	AluSx1	SINE/Alu	(184)	128	1	1885718
798	27.2	4.1	0.9	chr19	47277663	47277765	(11339851)	+	MIR	SINE/MIR	116	223	(39)	1885717
2337	8.8	1.6	0.0	chr19	48824961	48825257	(9792359)	+	AluSz	SINE/Alu	1	302	(10)	1889707
1757	16.7	1.4	1.1	chr19	48825308	48825588	(9792028)	C	AluJo	SINE/Alu	(8)	304	23	1889708
435	26.6	6.7	4.8	chr19	48825601	48825746	(9791870)	C	MIRb	SINE/MIR	(48)	220	72	1889709
716	18.0	1.4	1.6	chr19	48836592	48837072	(9780544)	+	MSR1	Satellite	1	480	(0)	1889739
1777	20.6	4.2	3.1	chr19	52253790	52253840	(6363776)	+	L1M3	LINE/L1	4661	4707	(1433)	1897104
1564	19.4	3.1	1.9	chr19	52253844	52254159	(6363457)	C	MER70B	LTR/ERVL	(254)	324	5	1897109
1553	24.8	5.8	2.9	chr19	54781929	54782282	(3835334)	C	MER70B	LTR/ERVL	(113)	465	96	1902300
2291	17.1	0.9	3.2	chr19	54782283	54782724	(3834892)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	1902301
1633	24.6	4.7	3.0	chr19	54812120	54812489	(3805127)	C	MER70B	LTR/ERVL	(99)	479	96	1902342
2106	18.5	1.2	2.5	chr19	54812490	54812927	(3804689)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	1902343
1557	24.4	5.5	3.2	chr19	54828367	54828723	(3788893)	C	MER70B	LTR/ERVL	(113)	465	101	1902364
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
14	18.1	0.0	6.8	chr2	963892	963935	(241229594)	+	(TCT)n	Simple_repeat	1	44	(0)	1911767
1809	11.1	2.7	2.7	chr2	3574677	3574974	(238618555)	C	AluJb	SINE/Alu	(14)	298	1	1914685
565	23.3	0.2	0.2	chr2	5022390	5023594	(237169935)	+	(CTACTA)n	Simple_repeat	1	1208	(0)	1916517
3205	8.8	0.9	0.9	chr2	11010827	11011275	(231182254)	+	L1PA13	LINE/L1	5709	6157	(6)	1925871
2045	19.2	8.7	1.4	chr2	11011316	11011752	(231181777)	+	MER70A	LTR/ERVL	1	472	(0)	1925872
13	11.6	3.6	0.0	chr2	14937077	14937104	(227256425)	+	(AACAG)n	Simple_repeat	1	29	(0)	1931931
357	25.6	14.3	4.5	chr2	14937250	14937287	(227256242)	+	MIR	SINE/MIR	40	74	(188)	1931932
2538	19.8	3.6	3.6	chr2	14937288	14937759	(227255770)	C	MER70A	LTR/ERVL	(0)	472	1	1931933
357	25.6	14.3	4.5	chr2	14937760	14937848	(227255681)	+	MIR	SINE/MIR	75	173	(89)	1931932
663	29.5	1.3	0.3	chr2	29004560	29006509	(213187020)	+	(GT)n	Simple_repeat	1	1975	(0)	1954647
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
1851	27.6	14.3	3.7	chr2	37592798	37593467	(204600062)	C	HAL1b	LINE/L1	(374)	2047	1287	1967976
2263	9.9	2.3	0.0	chr2	37593468	37593760	(204599769)	C	AluSc	SINE/Alu	(9)	300	1	1967981
369	26.9	0.9	0.9	chr2	42194393	42194508	(199999021)	C	L1M5	LINE/L1	(878)	5268	5153	1975124
1817	15.1	2.4	0.7	chr2	42194512	42194802	(199998727)	C	AluJb	SINE/Alu	(8)	304	9	1975125
286	29.7	0.0	0.0	chr2	42194855	42194945	(199998584)	C	L1M5	LINE/L1	(1126)	5020	4930	1975124
399	32.2	0.8	0.8	chr2	55133570	55133691	(187059838)	C	MIR3	SINE/MIR	(22)	186	65	1995355
2599	18.4	4.5	1.3	chr2	55133786	55134304	(187059225)	C	MER41B	LTR/ERV1	(38)	596	39	1995356
2642	19.3	0.9	1.1	chr2	58032536	58033001	(184160528)	+	MER70A	LTR/ERVL	8	472	(0)	1999279
2692	19.2	0.8	0.2	chr2	58286142	58286610	(183906919)	C	MER70A	LTR/ERVL	(0)	472	1	1999583
339	29.6	8.9	3.6	chr2	58286650	58286873	(183906656)	C	L1ME4c	LINE/L1	(490)	340	104	1999584
1214	24.8	9.9	3.4	chr2	67957967	67958408	(174235121)	C	ERV3-16A3_I-int	LTR/ERVL	(2708)	2518	2045	2014820
2426	20.7	1.7	0.2	chr2	67958439	67958907	(174234622)	C	MER70B	LTR/ERVL	(102)	476	1	2014821
658	33.8	5.7	5.2	chr2	67958908	67959522	(174234007)	C	HERV16-int	LTR/ERVL	(2794)	2202	1585	2014822
1780	15.1	1.1	0.0	chr2	70134851	70135133	(172058396)	C	AluJo	SINE/Alu	(0)	312	22	2018471
1256	15.6	0.0	0.0	chr2	70135142	70135320	(172058209)	C	AluJo	SINE/Alu	(133)	179	1	2018472
2385	9.0	0.0	0.3	chr2	70135435	70135735	(172057794)	C	AluY	SINE/Alu	(11)	300	1	2018473
2623	17.4	1.3	4.3	chr2	73741962	73742448	(168451081)	C	MER70A	LTR/ERVL	(0)	472	1	2024113
1425	24.9	5.2	3.9	chr2	73742450	73742670	(168450859)	+	L1ME1	LINE/L1	5684	5902	(277)	2024115
1978	16.3	0.3	0.7	chr2	75497568	75497873	(166695656)	+	AluJb	SINE/Alu	1	305	(7)	2027058
995	11.9	5.4	1.9	chr2	75647883	75648042	(166545487)	C	AluJr	SINE/Alu	(10)	302	137	2027298
18	14.2	0.0	0.0	chr2	75648043	75648065	(166545464)	+	(T)n	Simple_repeat	1	23	(0)	2027299
27	3.5	0.0	0.0	chr2	85336349	85336378	(156857151)	+	(T)n	Simple_repeat	1	30	(0)	2040553
1594	13.3	0.0	6.7	chr2	85336384	85336638	(156856891)	C	AluJr	SINE/Alu	(74)	238	1	2040554
2324	9.5	0.3	0.0	chr2	85336758	85337051	(156856478)	+	AluSx1	SINE/Alu	1	295	(17)	2040555
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
655	23.9	17.8	4.2	chr2	96580248	96580714	(145612815)	+	L1ME3A	LINE/L1	5603	6160	(2)	2052384
184	29.7	9.0	1.9	chr2	96580980	96581082	(145612447)	+	MIR3	SINE/MIR	42	152	(56)	2052385
280	29.5	6.9	0.0	chr2	99338817	99338911	(142854618)	C	L1MC5	LINE/L1	(43)	9261	9160	2056311
50	15.0	0.0	0.0	chr2	99338923	99339004	(142854525)	+	(TA)n	Simple_repeat	1	82	(0)	2056312
3550	19.0	4.5	1.5	chr2	102549007	102549675	(139643854)	+	L1M4	LINE/L1	1174	1878	(5639)	2061228
2220	9.4	2.4	0.0	chr2	102549676	102549962	(139643567)	+	AluSp	SINE/Alu	1	294	(19)	2061229
40350	6.8	0.6	0.6	chr2	108525925	108531004	(133662525)	+	Harlequin-int	LTR/ERV1	1814	6896	(0)	2069386
540	31.9	6.6	3.5	chr2	111066976	111067313	(131126216)	+	L1M5	LINE/L1	2604	2952	(3194)	2073067
352	30.4	7.4	9.3	chr2	111067393	111067737	(131125792)	+	L1M5	LINE/L1	3136	3473	(2673)	2073067
2652	15.3	1.7	0.4	chr2	111638555	111639019	(130554510)	C	L1MB3	LINE/L1	(0)	6183	5713	2073796
1524	26.1	7.6	0.2	chr2	119649474	119649873	(122543656)	C	MER70B	LTR/ERVL	(143)	435	4	2085695
781	26.4	11.6	2.7	chr2	129543688	129543778	(112649751)	C	L1MEc	LINE/L1	(5923)	477	377	2100555
31	0.0	0.0	0.0	chr2	129543779	129543805	(112649724)	+	(CT)n	Simple_repeat	1	27	(0)	2100556
781	26.4	11.6	2.7	chr2	129543806	129544114	(112649415)	C	L1MEc	LINE/L1	(6024)	376	38	2100555
2662	18.5	4.9	0.2	chr2	129559604	129560053	(112633476)	+	MER70A	LTR/ERVL	1	472	(0)	2100575
2477	18.7	2.3	1.7	chr2	132510192	132510658	(109682871)	C	MER70A	LTR/ERVL	(0)	472	3	2104684
2934	25.1	2.7	1.7	chr2	132510662	132511562	(109681967)	+	Charlie21a	DNA/hAT-Charlie	291	1201	(12)	2104685
239	31.0	8.4	5.3	chr2	139521750	139521899	(102671630)	+	L2c	LINE/L2	3225	3379	(8)	2114935
16	13.4	7.3	0.0	chr2	143266761	143266801	(98926728)	+	A-rich	Low_complexity	1	44	(0)	2119850
337	33.6	2.8	0.0	chr2	143266980	143267083	(98926446)	C	MLT1I	LTR/ERVL-MaLR	(207)	204	98	2119851
360	29.3	0.0	1.0	chr2	144540589	144540688	(97652841)	+	MER81	DNA/hAT-Blackjack	2	100	(14)	2121525
360	17.1	11.8	3.7	chr2	144540685	144540793	(97652736)	+	UCON41	Unknown	17	135	(4)	2121526
2262	20.3	1.7	4.7	chr2	155892460	155892945	(86300584)	C	MER70A	LTR/ERVL	(1)	471	1	2136708
255	40.1	1.1	6.0	chr2	155892946	155893085	(86300444)	+	L2a	LINE/L2	2878	3014	(405)	2136706
544	14.7	0.0	2.9	chr2	155988205	155988309	(86205220)	C	MER53	DNA/hAT	(1)	192	91	2136817
830	17.7	6.6	0.0	chr2	155988312	155988452	(86205077)	+	AluJr	SINE/Alu	138	288	(24)	2136818
13	15.9	5.7	0.0	chr2	155988453	155988487	(86205042)	+	(TAA)n	Simple_repeat	1	37	(0)	2136819
1816	17.9	0.0	1.0	chr2	159257012	159257301	(82936228)	C	AluJb	SINE/Alu	(25)	287	1	2141325
1584	23.9	8.8	1.2	chr2	159985805	159986144	(82207385)	+	MER70B	LTR/ERVL	4	376	(202)	2142466
1411	15.5	1.7	0.0	chr2	159986145	159986376	(82207153)	+	Tigger4a	DNA/TcMar-Tigger	1	236	(0)	2142467
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
1805	11.0	6.2	0.0	chr2	161279685	161279974	(80913555)	+	L1PA10	LINE/L1	5860	6168	(0)	2144206
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
1532	18.9	5.4	0.7	chr2	167922857	167923153	(74270376)	+	AluJo	SINE/Alu	1	312	(0)	2152816
487	19.4	5.6	5.6	chr2	167923293	167923400	(74270129)	+	AluJr	SINE/Alu	2	109	(203)	2152817
2212	4.0	0.0	0.0	chr2	176186584	176186832	(66006697)	+	AluY	SINE/Alu	1	249	(62)	2165740
19	6.8	0.0	3.0	chr2	176186833	176186867	(66006662)	+	(TAAA)n	Simple_repeat	1	33	(0)	2165741
533	33.0	5.7	4.1	chr2	180670198	180670440	(61523089)	C	MIR	SINE/MIR	(4)	258	12	2171757
5291	13.3	1.1	1.5	chr2	180670707	180672125	(61521404)	C	L1PA16	LINE/L1	(3)	6163	4739	2171758
16	0.0	0.0	0.0	chr2	194271852	194271869	(47921660)	+	(A)n	Simple_repeat	1	18	(0)	2189454
733	15.2	0.0	0.0	chr2	194271879	194271983	(47921546)	+	AluJb	SINE/Alu	185	289	(23)	2189455
2437	14.2	1.5	1.3	chr2	194272017	194272407	(47921122)	C	MER57B1	LTR/ERV1	(9)	392	1	2189456
4012	10.9	0.5	4.1	chr2	194367168	194367798	(47825731)	C	LTR14B	LTR/ERVK	(0)	608	1	2189587
725	27.3	12.3	4.3	chr2	194368039	194368587	(47824942)	C	L1MC4a	LINE/L1	(922)	6960	6674	2189588
321	28.8	15.8	1.9	chr2	197297463	197297670	(44895859)	C	MIRc	SINE/MIR	(6)	262	24	2193727
15323	17.1	3.5	0.8	chr2	198008204	198011996	(44181533)	C	L1MB2	LINE/L1	(7)	6400	2493	2194916
1725	23.6	7.4	2.0	chr2	198011997	198012442	(44181087)	C	MER70A	LTR/ERVL	(0)	472	1	2194917
15323	17.9	7.4	1.5	chr2	198012443	198012709	(44180820)	C	L1MB2	LINE/L1	(3888)	2496	2214	2194916
2164	13.3	0.3	0.7	chr2	200165293	200165600	(42027929)	+	AluSz	SINE/Alu	1	307	(5)	2197919
2136	20.6	5.8	0.7	chr2	200165693	200166137	(42027392)	+	MER70B	LTR/ERVL	1	469	(109)	2197920
2546	21.6	5.4	10.1	chr2	206218878	206219605	(35973924)	+	MER97b	DNA/hAT-Tip100	10	717	(332)	2208245
2142	20.5	1.9	12.7	chr2	210877689	210878214	(31315315)	C	MER70A	LTR/ERVL	(2)	470	3	2214882
2115	21.3	3.0	1.4	chr2	211235558	211235991	(30957538)	+	MER70B	LTR/ERVL	1	441	(137)	2215332
1612	23.9	8.4	2.8	chr2	215241638	215242172	(26951357)	C	L1MC4	LINE/L1	(132)	7910	7343	2220753
1000	36.0	8.6	5.7	chr2	215242291	215243137	(26950392)	+	L2c	LINE/L2	1935	2823	(596)	2220754
3264	20.8	5.6	3.6	chr2	218716804	218716994	(23476535)	C	Charlie1a	DNA/hAT-Charlie	(1171)	284	93	2226689
1328	18.4	13.0	1.9	chr2	218716995	218717261	(23476268)	C	AluJb	SINE/Alu	(10)	302	2	2226693
3264	20.8	5.6	3.6	chr2	218717262	218717363	(23476166)	C	Charlie1a	DNA/hAT-Charlie	(1363)	92	1	2226689
575	30.9	5.9	1.9	chr2	220336377	220336587	(21856942)	+	MIR	SINE/MIR	11	230	(32)	2229413
5652	22.1	3.4	4.9	chr2	237507367	237508099	(4685430)	C	Charlie1a	DNA/hAT-Charlie	(486)	969	260	2256452
1966	23.1	0.2	0.1	chr20	63841	67292	(64376875)	+	(ATTCC)n	Simple_repeat	2	3456	(0)	2262202
2185	8.9	0.7	0.3	chr20	4202278	4202579	(60241588)	+	AluSx1	SINE/Alu	3	305	(7)	2270350
2999	13.1	0.6	3.1	chr20	4202580	4202886	(60241281)	+	MER70A	LTR/ERVL	174	470	(2)	2270349
1224	28.6	6.5	5.0	chr20	4202887	4203237	(60240930)	C	L1ME3A	LINE/L1	(35)	6138	5772	2270348
1224	28.6	6.5	5.0	chr20	4203882	4204089	(60240078)	C	L1ME3A	LINE/L1	(424)	5749	5529	2270348
520	22.3	1.1	0.0	chr20	4204090	4204183	(60239984)	+	MER70B	LTR/ERVL	128	222	(356)	2270353
314	17.6	0.0	0.0	chr20	4204198	4204248	(60239919)	C	MER70B	LTR/ERVL	(245)	333	283	2270354
646	14.2	0.0	0.0	chr20	4204277	4204396	(60239771)	C	L1M5	LINE/L1	(2454)	3692	3573	2270355
2736	12.6	8.3	1.7	chr20	7806549	7807018	(56637149)	+	LTR22E	LTR/ERVK	4	507	(0)	2276363
23025	8.0	0.7	1.1	chr20	7807019	7810723	(56633444)	C	L1PA7	LINE/L1	(165)	5989	2286	2276362
581	27.9	13.0	4.9	chr20	21096261	21096527	(43347640)	C	MLT1J1	LTR/ERVL-MaLR	(115)	329	38	2296597
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
576	23.4	6.1	1.9	chr20	30866632	30866788	(33577379)	+	MIRb	SINE/MIR	33	196	(72)	2305530
243	29.9	5.9	4.5	chr20	37980631	37980763	(26463404)	+	MIR3	SINE/MIR	81	220	(48)	2321204
242	23.2	10.4	0.0	chr20	37980862	37980930	(26463237)	+	Charlie4z	DNA/hAT-Charlie	3	79	(88)	2321205
443	33.3	11.4	3.3	chr20	43524970	43525273	(20918894)	C	L2c	LINE/L2	(650)	2769	2438	2331370
528	27.2	2.5	12.4	chr20	43525356	43525573	(20918594)	C	MER91A	DNA/hAT-Tip100	(0)	196	1	2331373
268	30.4	7.1	0.0	chr20	43525735	43525826	(20918341)	+	MIRc	SINE/MIR	118	216	(52)	2331374
367	28.0	9.1	2.1	chr20	47944268	47944460	(16499707)	C	L2	LINE/L2	(411)	3008	2801	2341161
188	33.3	2.1	11.4	chr20	47944462	47944671	(16499496)	+	L2a	LINE/L2	3236	3425	(1)	2341156
1447	14.8	15.9	1.2	chr20	53691208	53691463	(10752704)	+	AluJo	SINE/Alu	2	302	(10)	2354084
346	36.1	4.0	4.3	chr20	53691508	53691785	(10752382)	C	L2	LINE/L2	(643)	2776	2500	2354085
2120	19.5	0.5	4.2	chr20	57911526	57911959	(6532208)	C	MER70A	LTR/ERVL	(52)	420	3	2362037
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
785	22.6	0.5	0.1	chr21	8455261	8456884	(38253099)	+	(TCTC)n	Simple_repeat	1	1629	(0)	2373669
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
381	17.5	1.6	0.0	chr21	9248617	9248679	(37461304)	+	AluYj4	SINE/Alu	224	287	(24)	2374342
312	21.5	5.8	0.0	chr21	9248928	9248992	(37460991)	+	AluJb	SINE/Alu	225	293	(19)	2374343
76	18.0	0.0	0.0	chr21	9248994	9249134	(37460849)	+	(AATGG)n	Simple_repeat	1	141	(0)	2374344
2558	6.4	0.9	0.0	chr21	9249136	9249479	(37460504)	+	L1P1	LINE/L1	3726	4072	(2074)	2374345
62	26.6	5.9	1.1	chr21	9586578	9586831	(37123152)	+	(TGGTGA)n	Simple_repeat	1	269	(0)	2374598
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
21	16.7	0.0	2.4	chr21	9819273	9819314	(36890669)	+	(AC)n	Simple_repeat	1	42	(0)	2374898
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
565	28.4	7.0	9.2	chr21	14597624	14598015	(32111968)	C	MLT1J	LTR/ERVL-MaLR	(19)	493	111	2378043
2544	17.8	3.8	3.4	chr21	26689886	26690115	(20019868)	+	MER70A	LTR/ERVL	1	225	(247)	2394348
2256	8.2	0.0	0.0	chr21	26690116	26690384	(20019599)	+	AluSx1	SINE/Alu	2	270	(42)	2394349
737	24.7	11.6	6.5	chr21	27802598	27803190	(18906793)	C	LTR50	LTR/ERVL	(42)	753	34	2395888
619	24.7	1.7	13.6	chr21	33666691	33666798	(13043185)	+	Charlie1	DNA/hAT-Charlie	7	108	(2673)	2405410
1524	14.0	2.6	10.0	chr21	33666799	33667127	(13042856)	C	AluJb	SINE/Alu	(8)	304	1	2405411
542	24.7	1.7	13.6	chr21	33667128	33667290	(13042693)	+	Charlie1	DNA/hAT-Charlie	109	245	(2536)	2405412
9711	13.6	1.7	0.8	chr21	38227979	38229403	(8480580)	C	HERV3-int	LTR/ERV1	(6987)	1439	2	2412761
1428	21.9	5.0	3.9	chr21	38229404	38229805	(8480178)	C	LTR76	LTR/ERV1	(0)	675	214	2412761
133	15.6	11.9	5.1	chr21	42670034	42670824	(4039159)	+	(TTCACAC)n	Simple_repeat	1	885	(0)	2419161
382	28.7	6.2	0.0	chr21	43793095	43793216	(2916767)	+	MER5B	DNA/hAT-Charlie	2	131	(47)	2420818
225	31.5	5.3	2.7	chr21	46323406	46323552	(386431)	C	MER4E	LTR/ERV1	(153)	613	463	2423810
3076	15.8	1.1	0.9	chr22	10721335	10730387	(40088081)	+	(TCCATTCCAT)n	Simple_repeat	1	9151	(0)	2424547
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
2380	10.8	0.0	1.3	chr22	18128531	18128846	(32689622)	C	AluSx	SINE/Alu	(0)	312	1	2430264
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
1340	24.2	9.2	6.6	chr22	27279331	27279904	(23538564)	C	L1ME3	LINE/L1	(1)	6177	5572	2446363
270	25.4	14.7	0.7	chr22	29623777	29623911	(21194557)	+	MIR3	SINE/MIR	39	195	(13)	2451017
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
945	15.4	17.2	9.8	chr22	35667326	35667591	(15150877)	C	MER65D	LTR/ERV1	(183)	290	1	2463548
396	11.5	4.7	0.0	chr22	35667592	35667647	(15150821)	C	MLT1A0	LTR/ERVL-MaLR	(306)	59	1	2463549
3309	12.1	6.0	2.0	chr22	35667863	35668403	(15150065)	+	MER4B	LTR/ERV1	11	574	(36)	2463546
1926	14.8	3.5	1.6	chr22	43038639	43038943	(7779525)	+	AluJb	SINE/Alu	2	312	(0)	2479435
1975	15.9	0.7	0.3	chr22	45279605	45279913	(5538555)	+	AluJb	SINE/Alu	1	310	(2)	2483603
942	18.3	0.0	0.0	chr22	49846456	49846619	(971849)	+	AluSg4	SINE/Alu	135	298	(12)	2489830
563	17.4	1.4	11.6	chr22	49846643	49846797	(971671)	C	AluJr	SINE/Alu	(45)	267	129	2489831
2243	9.3	0.0	0.0	chr22	49846835	49847135	(971333)	+	AluSc8	SINE/Alu	2	302	(9)	2489832
405	13.0	7.8	3.1	chr22	49972792	49973865	(844603)	+	(GT)n	Simple_repeat	1	1123	(0)	2490010
17902	12.8	3.9	2.6	chr3	6704891	6705697	(191589862)	+	L1PA15	LINE/L1	5891	6689	(3)	2502621
275	29.2	0.0	0.0	chr3	14549735	14549799	(183745760)	C	MIR	SINE/MIR	(88)	174	110	2517173
581	22.4	5.0	0.7	chr3	17689713	17689847	(180605712)	+	MER20	DNA/hAT-Charlie	2	142	(77)	2522215
236	28.4	5.1	1.3	chr3	25602963	25603037	(172692522)	C	MamTip2	DNA/hAT-Tip100	(225)	80	3	2533563
2151	13.7	0.0	1.3	chr3	25603230	25603542	(172692017)	C	AluSz6	SINE/Alu	(3)	309	1	2533564
245	25.0	9.3	0.0	chr3	33648791	33648858	(164646701)	+	L2a	LINE/L2	3304	3378	(48)	2546224
835	28.0	18.4	1.5	chr3	33648863	33649430	(164646129)	+	L2a	LINE/L2	2714	3387	(39)	2546225
193	18.3	0.3	0.0	chr3	38084271	38084619	(160210940)	+	(TAG)n	Simple_repeat	1	350	(0)	2552504
325	29.0	11.4	0.0	chr3	39947949	39948041	(158347518)	C	MER5B	DNA/hAT-Charlie	(73)	105	1	2555226
1043	24.4	9.1	1.4	chr3	39948458	39948965	(158346594)	+	L1MEd	LINE/L1	877	1427	(5659)	2555227
1259	12.6	0.6	0.0	chr3	42036749	42036922	(156258637)	C	AluJr4	SINE/Alu	(10)	302	128	2558430
619	23.9	7.6	8.4	chr3	43151795	43152045	(155143514)	+	LTR16E1	LTR/ERVL	213	461	(77)	2560222
4304	14.1	2.9	1.7	chr3	45940148	45940860	(152354699)	+	MER50	LTR/ERV1	1	722	(12)	2564687
1038	19.0	4.2	2.4	chr3	45940861	45941070	(152354489)	+	MER50-int	LTR/ERV1	7	220	(6985)	2564687
599	20.0	2.0	0.0	chr3	45941083	45941182	(152354377)	C	FLAM_A	SINE/Alu	(40)	102	1	2564688
6547	20.0	3.4	4.5	chr3	48310799	48312007	(149983552)	+	L1MB5	LINE/L1	3557	4747	(1399)	2569142
566	36.6	2.1	0.3	chr3	49977014	49977295	(148318264)	+	L2	LINE/L2	2777	3063	(356)	2572360
473	28.9	12.1	4.7	chr3	52457034	52457247	(145838312)	C	MIRb	SINE/MIR	(2)	266	35	2575911
752	22.4	7.7	0.6	chr3	71364931	71365110	(126930449)	C	MER58A	DNA/hAT-Charlie	(1)	223	30	2607120
2195	22.6	3.2	4.0	chr3	77955822	77956291	(120339268)	C	MER70A	LTR/ERVL	(6)	466	1	2617499
2520	13.3	0.8	0.0	chr3	77956363	77956723	(120338836)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2617500
260	25.4	7.5	8.8	chr3	83661042	83661329	(114634230)	+	L1MC4	LINE/L1	2538	2636	(355)	2624828
1176	24.2	8.4	1.7	chr3	83661330	83661627	(114633932)	C	MER70A	LTR/ERVL	(0)	472	153	2624829
582	23.1	10.8	2.5	chr3	83661630	83661833	(114633726)	+	L1MC4	LINE/L1	7584	7806	(236)	2624830
31	22.5	4.6	4.4	chr3	84053506	84053601	(114241958)	+	(TA)n	Simple_repeat	1	98	(0)	2625324
29	2.6	4.9	2.3	chr3	84053602	84053642	(114241917)	+	(AT)n	Simple_repeat	1	43	(0)	2625325
1535	21.1	4.5	0.0	chr3	84053645	84053919	(114241640)	C	AluJr	SINE/Alu	(23)	289	2	2625326
1671	19.2	0.0	3.2	chr3	96345426	96345738	(101949821)	+	AluJb	SINE/Alu	2	304	(8)	2636583
3072	27.9	7.4	3.8	chr3	96345739	96347163	(101948396)	+	L1ME1	LINE/L1	4146	5652	(1289)	2636581
2969	20.6	4.2	0.0	chr3	108840621	108841172	(89454387)	C	MER70B	LTR/ERVL	(2)	576	1	2652866
238	31.2	1.1	11.4	chr3	108841173	108841219	(89454340)	C	L2c	LINE/L2	(53)	3334	3294	2652865
215	30.5	7.9	1.2	chr3	129387013	129387095	(68908464)	C	L2b	LINE/L2	(2)	3373	3285	2683644
449	32.1	6.7	1.1	chr3	129387132	129387368	(68908191)	C	MIR	SINE/MIR	(8)	260	6	2683645
1587	16.2	5.9	0.7	chr3	149390324	149390595	(48904964)	+	AluJr	SINE/Alu	17	303	(9)	2713505
2441	9.2	0.0	0.0	chr3	154100176	154100481	(44195078)	+	AluY	SINE/Alu	1	306	(5)	2720708
260	30.2	4.6	6.3	chr3	154100482	154100583	(44194976)	C	L1M5	LINE/L1	(416)	5708	5608	2720707
363	27.3	11.4	0.0	chr3	156788532	156788663	(41506896)	+	MIRc	SINE/MIR	6	154	(114)	2724558
380	22.6	0.0	4.1	chr3	156788767	156788863	(41506696)	C	MIR	SINE/MIR	(66)	196	104	2724559
359	19.1	13.5	0.0	chr3	156789026	156789140	(41506419)	C	MamRep434	DNA/TcMar-Tigger	(77)	349	217	2724560
2219	21.4	2.4	1.3	chr3	165159888	165160350	(33135209)	C	MER70A	LTR/ERVL	(4)	468	1	2735851
4063	17.5	6.7	0.1	chr3	165751306	165752056	(32543503)	+	LTR1E	LTR/ERV1	1	804	(0)	2736656
983	22.4	3.7	8.4	chr3	165752057	165752277	(32543282)	+	L1ME2z	LINE/L1	6223	6440	(4)	2736655
4113	29.7	4.7	4.3	chr3	166968225	166970059	(31325500)	C	L1MA6	LINE/L1	(4646)	2920	845	2738132
277	28.2	13.4	0.0	chr3	171810962	171811071	(26484488)	C	MIRb	SINE/MIR	(110)	158	32	2745124
403	31.7	32.0	0.0	chr3	174198185	174198379	(24097180)	C	MIR	SINE/MIR	(0)	268	11	2748623
491	26.7	10.1	0.5	chr3	174198383	174198578	(24096981)	C	L1ME4a	LINE/L1	(393)	5731	5515	2748622
2397	18.6	7.6	0.0	chr3	178853646	178854081	(19441478)	C	MER70A	LTR/ERVL	(0)	472	1	2755274
318	33.1	12.7	3.8	chr3	179152288	179152444	(19143115)	+	MIR3	SINE/MIR	25	197	(11)	2755694
390	27.3	18.3	1.1	chr3	179152450	179152638	(19142921)	+	MIRb	SINE/MIR	26	254	(14)	2755695
1046	21.1	1.8	0.5	chr3	188468268	188468481	(9827078)	C	MER58A	DNA/hAT-Charlie	(3)	221	5	2771963
9088	5.6	0.6	0.2	chr4	29958	31898	(190182657)	+	L1PA5	LINE/L1	4207	6154	(0)	2788543
6799	11.5	1.9	2.3	chr4	1912900	1913910	(188300645)	+	LTR13	LTR/ERVK	1	1007	(0)	2790820
756	27.0	14.4	14.6	chr4	1913911	1914028	(188300527)	C	HAL1	LINE/L1	(751)	1756	1635	2790819
251	30.5	8.7	0.0	chr4	16500782	16500876	(173713679)	+	L2b	LINE/L2	3241	3344	(31)	2814441
2800	15.5	3.2	3.8	chr4	16500949	16501423	(173713132)	+	MER70A	LTR/ERVL	1	472	(0)	2814442
2218	18.6	3.5	2.5	chr4	27607986	27608431	(162606124)	+	MER70A	LTR/ERVL	22	472	(0)	2832839
2273	19.9	4.2	0.9	chr4	28197936	28198391	(162016164)	C	MER70A	LTR/ERVL	(0)	472	1	2833662
952	30.6	8.9	5.3	chr4	35734983	35735148	(154479407)	C	LTR33	LTR/ERVL	(0)	515	342	2843849
2175	24.0	1.1	2.3	chr4	35735149	35735626	(154478929)	C	MER70A	LTR/ERVL	(0)	472	1	2843850
952	30.6	8.9	5.3	chr4	35735627	35735945	(154478610)	C	LTR33	LTR/ERVL	(174)	341	11	2843849
1954	21.4	2.5	1.5	chr4	45990106	45990494	(144224061)	C	MER70B	LTR/ERVL	(102)	476	84	2860233
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
1413	23.5	3.2	4.4	chr4	66316027	66316435	(123898120)	C	LTR52	LTR/ERVL	(16)	405	2	2885479
3374	16.6	3.6	4.6	chr4	73205325	73206397	(117008158)	+	L1MA8	LINE/L1	4749	5801	(490)	2894579
46	20.9	0.0	0.0	chr4	73206398	73206493	(117008062)	+	GA-rich	Low_complexity	1	96	(0)	2894581
2605	12.7	1.7	6.1	chr4	73206495	73206826	(117007729)	+	L1MA8	LINE/L1	5819	6135	(156)	2894579
2181	24.9	6.1	1.8	chr4	79717005	79717667	(110496888)	+	L1ME2	LINE/L1	4661	5520	(644)	2903945
2118	22.0	4.0	13.2	chr4	79717668	79718306	(110496249)	+	MER70B	LTR/ERVL	1	578	(0)	2903946
236	29.3	4.7	3.9	chr4	87867090	87867217	(102347338)	C	MamRep488	DNA/hAT-Tip100	(18)	201	73	2916152
489	21.1	21.6	5.6	chr4	87867577	87867772	(102346783)	C	MER106A	DNA/hAT-Charlie	(0)	236	1	2916153
269	33.6	17.4	2.2	chr4	96211562	96212233	(94002322)	C	L2	LINE/L2	(673)	2746	1952	2927396
706	18.2	14.8	0.0	chr4	112532466	112532597	(77681958)	+	AluJr	SINE/Alu	138	292	(20)	2949309
2167	14.5	0.0	0.0	chr4	112905652	112905961	(77308594)	C	AluJb	SINE/Alu	(2)	310	1	2950097
1793	24.4	4.4	1.0	chr4	114423794	114424186	(75790369)	C	MER70A	LTR/ERVL	(2)	470	64	2952054
21332	11.1	2.8	0.7	chr4	114424209	114429586	(75784969)	C	L1PA10	LINE/L1	(474)	5879	386	2952055
597	33.7	8.9	5.5	chr4	117349496	117349734	(72864821)	+	L1MEg	LINE/L1	43	285	(5799)	2955571
899	24.2	0.9	2.3	chr4	117349735	117349954	(72864601)	C	MER20	DNA/hAT-Charlie	(0)	219	3	2955572
1166	9.4	0.0	0.6	chr4	118870739	118870899	(71343656)	+	L1PA10	LINE/L1	5998	6157	(11)	2957625
266	33.9	5.1	6.7	chr4	118870957	118871076	(71343479)	C	MIR3	SINE/MIR	(73)	135	18	2957626
2670	17.8	2.3	0.9	chr4	123090826	123091290	(67123265)	C	MER70A	LTR/ERVL	(0)	472	1	2963452
15121	13.2	2.0	0.4	chr4	124004385	124006746	(66207809)	C	Tigger1	DNA/TcMar-Tigger	(16)	2402	1	2964787
126	6.4	1.0	3.1	chr4	124470395	124470587	(65743968)	+	(CTTC)n	Simple_repeat	1	195	(0)	2965315
21	28.7	4.8	3.9	chr4	124470588	124470612	(65743943)	+	(CTCT)n	Simple_repeat	1	25	(0)	2965316
56	2.6	4.9	2.3	chr4	124470613	124470694	(65743861)	+	(TCTT)n	Simple_repeat	1	86	(0)	2965317
289	23.8	14.0	4.2	chr4	128831005	128831167	(61383388)	+	MIR3	SINE/MIR	8	184	(24)	2971441
2027	19.7	8.4	1.4	chr4	138148693	138149114	(52065441)	+	MER70A	LTR/ERVL	1	454	(18)	2982519
469	29.4	1.4	1.4	chr4	145879218	145879362	(44335193)	+	MIRb	SINE/MIR	118	262	(6)	2993531
770	4.0	0.0	3.8	chr4	150623861	150623965	(39590590)	C	L1PA3	LINE/L1	(5)	6150	6050	2999999
14	28.1	0.0	0.0	chr4	154606606	154606652	(35607903)	+	(TTTATTT)n	Simple_repeat	1	47	(0)	3006289
3442	17.1	8.0	2.0	chr4	158517088	158517549	(31697006)	+	L1MA6	LINE/L1	5791	6290	(10)	3011467
409	28.8	10.8	0.5	chr4	163495374	163495572	(26718983)	C	L1ME3E	LINE/L1	(88)	6154	5933	3018141
413	27.7	5.7	3.5	chr4	169275830	169276001	(20938554)	+	MIRb	SINE/MIR	77	252	(16)	3026084
210	11.4	0.0	2.8	chr4	169275975	169276010	(20938545)	+	L2c	LINE/L2	3341	3375	(12)	3026085
203	24.2	12.0	0.0	chr4	169276031	169276096	(20938459)	+	MIR3	SINE/MIR	108	182	(26)	3026086
2111	13.7	2.0	0.3	chr4	169276452	169276744	(20937811)	C	AluJb	SINE/Alu	(13)	299	2	3026087
2322	21.9	3.2	0.4	chr4	171284863	171285321	(18929234)	+	MER70A	LTR/ERVL	1	472	(0)	3028790
411	28.8	9.4	6.2	chr4	180555790	180556045	(9658510)	C	Charlie7a	DNA/hAT-Charlie	(2)	270	6	3040917
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
1095	10.4	0.7	0.9	chr4	190180974	190182175	(32380)	+	BSR/Beta	Satellite	1	1199	(0)	3054653
2108	28.4	5.9	4.9	chr5	10110854	10111772	(171426487)	C	L1MC4	LINE/L1	(1)	8041	7113	3066336
900	16.1	6.9	5.3	chr5	16456093	16456262	(165081997)	C	AluJb	SINE/Alu	(7)	305	133	3075023
800	25.1	5.7	5.0	chr5	26643998	26644675	(154893584)	+	MER34B-int	LTR/ERV1	1096	1968	(2903)	3088793
3170	18.4	1.8	13.7	chr5	26644680	26644987	(154893272)	C	MER50	LTR/ERV1	(0)	734	486	3088798
1923	22.3	5.4	14.0	chr5	29949137	29949766	(151588493)	C	MER70B	LTR/ERVL	(1)	577	5	3093049
797	26.4	0.0	0.6	chr5	33958506	33958687	(147579572)	C	AluJr	SINE/Alu	(1)	311	131	3099121
2479	18.7	3.8	0.0	chr5	34265461	34265893	(147272366)	+	MER70A	LTR/ERVL	22	471	(1)	3099582
16	14.2	0.0	0.0	chr5	34664160	34664190	(146874069)	+	(TTTA)n	Simple_repeat	1	31	(0)	3100190
942	15.4	25.5	0.9	chr5	34664208	34664434	(146873825)	+	AluSz6	SINE/Alu	1	302	(10)	3100191
386	37.0	3.0	0.0	chr5	36028187	36028481	(145509778)	C	L1MC4	LINE/L1	(5568)	647	344	3102196
2674	16.6	2.8	3.0	chr5	36028537	36029009	(145509250)	+	MER70A	LTR/ERVL	1	472	(0)	3102197
2005	19.1	2.5	1.2	chr5	38903119	38903520	(142634739)	C	MER70A	LTR/ERVL	(0)	472	66	3106833
239	22.9	0.0	1.6	chr5	38903521	38903582	(142634677)	C	L1MEf	LINE/L1	(5552)	648	588	3106834
745	19.8	2.3	0.6	chr5	38903573	38903740	(142634519)	C	L1MEf	LINE/L1	(6015)	185	15	3106834
4532	17.3	5.6	3.1	chr5	73346809	73347513	(108190746)	+	L1MB7	LINE/L1	1399	2132	(5385)	3150353
337	26.6	1.1	0.0	chr5	86716748	86716841	(94821418)	+	MARNA	DNA/TcMar-Mariner	140	234	(352)	3170158
2571	19.6	1.1	0.4	chr5	92739675	92740141	(88798118)	+	MER70A	LTR/ERVL	3	472	(0)	3177824
188	32.1	3.6	1.9	chr5	101678821	101678874	(79859385)	+	MamRTE1	LINE/RTE-BovB	1499	1553	(2259)	3189190
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
2519	16.9	3.2	2.1	chr5	112120720	112121185	(69417074)	+	MER70A	LTR/ERVL	2	472	(0)	3202339
2714	9.7	2.4	0.7	chr5	113520766	113521170	(68017089)	C	L1PA13	LINE/L1	(1)	6162	5751	3204411
713	27.2	8.9	3.9	chr5	124206655	124206910	(57331349)	+	MER102c	DNA/hAT-Charlie	62	331	(0)	3218363
2832	18.4	2.0	1.8	chr5	131083667	131084274	(50453985)	C	L1MA8	LINE/L1	(30)	6261	5653	3227312
5407	17.5	16.9	1.8	chr5	131084279	131084839	(50453420)	C	L1M3f	LINE/L1	(4987)	2578	1942	3227313
5532	23.5	6.6	4.2	chr5	131609283	131610856	(49927403)	+	ERV3-16A3_I-int	LTR/ERVL	3609	5222	(4)	3228237
4893	20.9	4.9	1.6	chr5	132650103	132651246	(48887013)	+	L1MC4a	LINE/L1	6699	7882	(0)	3229704
1198	23.2	11.1	3.6	chr5	132651249	132651456	(48886803)	+	L2a	LINE/L2	2813	3035	(384)	3229698
1870	17.1	12.3	0.0	chr5	132651457	132651812	(48886447)	+	MLT1A1	LTR/ERVL-MaLR	1	406	(2)	3229708
2431	8.9	0.0	0.0	chr5	138172243	138172546	(43365713)	+	AluSc	SINE/Alu	1	304	(5)	3238272
1335	15.7	3.8	10.9	chr5	138172564	138172875	(43365384)	+	AluJo	SINE/Alu	7	295	(17)	3238273
302	21.1	9.2	6.8	chr5	138172876	138172992	(43365267)	+	L1ME4b	LINE/L1	645	764	(128)	3238274
495	10.5	0.0	9.5	chr5	138688069	138688152	(42850107)	+	MLT1C	LTR/ERVL-MaLR	95	176	(291)	3239360
1055	16.5	0.0	0.0	chr5	138688153	138688316	(42849943)	+	AluJb	SINE/Alu	141	304	(8)	3239361
2102	10.2	0.0	2.5	chr5	138688318	138688602	(42849657)	+	AluY	SINE/Alu	1	278	(33)	3239362
3744	12.2	9.4	6.1	chr5	146814343	146815050	(34723209)	+	MER50	LTR/ERV1	1	734	(0)	3253215
408	31.9	8.6	4.2	chr5	146815051	146815338	(34722921)	C	L3	LINE/CR1	(16)	4083	3782	3253216
636	29.4	17.5	2.1	chr5	153484372	153485149	(28053110)	C	L2a	LINE/L2	(0)	3426	2463	3265310
509	28.1	6.3	7.9	chr5	159328320	159328497	(22209762)	+	MIRb	SINE/MIR	31	205	(63)	3275918
569	23.1	0.7	2.9	chr5	159993064	159993158	(21545101)	+	MER113	DNA/hAT-Charlie	80	175	(346)	3277143
2757	17.1	3.4	0.2	chr5	159993159	159993614	(21544645)	C	MER70A	LTR/ERVL	(0)	472	2	3277144
569	23.1	0.7	2.9	chr5	159993615	159993656	(21544603)	+	MER113	DNA/hAT-Charlie	176	214	(307)	3277143
758	17.3	1.6	0.0	chr5	159993687	159993813	(21544446)	C	AluJr4	SINE/Alu	(179)	133	5	3277145
201	31.4	7.5	0.0	chr5	160369764	160369849	(21168410)	C	L2	LINE/L2	(670)	2749	2657	3278043
726	23.6	11.5	0.0	chr5	160370042	160370249	(21168010)	+	MIRb	SINE/MIR	29	263	(5)	3278044
297	21.0	0.0	1.6	chr5	160370271	160370333	(21167926)	+	MIRb	SINE/MIR	206	267	(1)	3278045
352	28.9	7.7	3.2	chr5	162929748	162929854	(18608405)	+	MIRb	SINE/MIR	74	184	(84)	3281800
2589	19.2	2.8	0.4	chr5	162929855	162930314	(18607945)	C	MER70A	LTR/ERVL	(0)	472	2	3281801
352	28.9	7.7	3.2	chr5	162930315	162930392	(18607867)	+	MIRb	SINE/MIR	185	268	(0)	3281800
2480	20.0	1.5	1.5	chr5	173423641	173424112	(8114147)	C	MER70A	LTR/ERVL	(0)	472	1	3299568
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
2564	18.9	1.5	2.3	chr5	178642434	178642909	(2895350)	C	MER70A	LTR/ERVL	(0)	472	1	3309543
1843	31.6	3.9	2.0	chr5	178642910	178643333	(2894926)	C	HERV16-int	LTR/ERVL	(4113)	883	456	3309542
821	29.7	5.5	1.2	chr5	179160777	179161120	(2377139)	+	MLT1I	LTR/ERVL-MaLR	52	411	(0)	3310433
2507	17.1	3.3	0.0	chr5	179161397	179161835	(2376424)	+	L1MA5	LINE/L1	5845	6298	(2)	3310434
2583	19.2	0.6	0.2	chr6	2800532	2801001	(168004978)	C	MER70A	LTR/ERVL	(0)	472	1	3317936
429	29.8	9.3	7.5	chr6	3355843	3356096	(167449883)	+	L1ME3E	LINE/L1	5837	6095	(147)	3318774
644	23.5	4.5	11.5	chr6	9926254	9926510	(160879469)	+	MER33	DNA/hAT-Charlie	34	274	(50)	3328708
1695	16.1	0.0	2.2	chr6	9926511	9926784	(160879195)	C	AluJr	SINE/Alu	(8)	304	37	3328709
644	23.5	4.5	11.5	chr6	9926785	9926839	(160879140)	+	MER33	DNA/hAT-Charlie	275	323	(1)	3328708
1468	25.9	7.0	2.2	chr6	10190034	10190444	(160615535)	C	MER70B	LTR/ERVL	(146)	432	1	3329087
403	27.3	9.1	0.0	chr6	17828666	17828815	(152977164)	+	MIRc	SINE/MIR	90	254	(14)	3341887
620	34.8	10.5	2.8	chr6	22268482	22268918	(148537061)	C	L2a	LINE/L2	(32)	3394	2920	3349049
609	23.6	5.2	2.4	chr6	22268957	22269125	(148536854)	+	MIR	SINE/MIR	89	262	(0)	3349050
485	34.3	4.4	0.0	chr6	22269173	22269344	(148536635)	C	MIR3	SINE/MIR	(13)	195	16	3349051
3808	16.1	1.9	3.3	chr6	23559638	23560369	(147245610)	+	MER50	LTR/ERV1	1	722	(12)	3350708
514	25.8	5.3	0.6	chr6	23560417	23560576	(147245403)	+	LTR16B2	LTR/ERVL	136	303	(159)	3350709
3130	12.9	0.0	4.3	chr6	23560587	23561122	(147244857)	+	MER41C	LTR/ERV1	9	521	(0)	3350710
14	4.5	0.0	4.0	chr6	31577089	31577113	(139228866)	+	(CTCC)n	Simple_repeat	1	25	(0)	3363538
2082	14.3	0.0	1.0	chr6	34404848	34405148	(136400831)	+	AluJo	SINE/Alu	1	298	(14)	3368309
1679	23.6	2.6	8.2	chr6	34405149	34405443	(136400536)	+	L1ME1	LINE/L1	4737	5027	(1119)	3368308
403	37.1	6.5	2.7	chr6	37758559	37759046	(133046933)	+	Plat_L3	LINE/CR1	2371	2878	(708)	3375290
261	29.4	6.0	6.0	chr6	37759095	37759210	(133046769)	+	L2b	LINE/L2	3259	3374	(1)	3375291
809	22.5	16.5	1.4	chr6	44853086	44853306	(125952673)	C	MIR	SINE/MIR	(0)	262	2	3387843
773	17.9	0.0	0.0	chr6	44853388	44853510	(125952469)	+	AluJo	SINE/Alu	11	133	(179)	3387844
1338	21.5	6.9	4.2	chr6	44853532	44854011	(125951968)	C	MER34C2	LTR/ERV1	(0)	555	62	3387845
611	12.7	0.0	0.0	chr6	57050037	57050115	(113755864)	C	FLAM_A	SINE/Alu	(36)	106	28	3405052
1788	18.6	0.7	1.4	chr6	57050321	57050615	(113755364)	C	AluJo	SINE/Alu	(19)	293	1	3405053
384	26.5	16.3	0.5	chr6	63542760	63542960	(107263019)	+	L2a	LINE/L2	2569	2807	(612)	3410751
462	19.1	7.1	1.5	chr6	63542995	63543127	(107262852)	C	L1MC5	LINE/L1	(52)	9252	9112	3410754
372	20.7	4.4	1.1	chr6	63543171	63543258	(107262721)	+	MER81	DNA/hAT-Blackjack	1	91	(23)	3410755
319	32.9	9.7	12.2	chr6	63543266	63543552	(107262427)	+	L2a	LINE/L2	3109	3426	(0)	3410751
599	8.8	2.4	0.0	chr6	89835780	89835859	(80970120)	C	AluYe5	SINE/Alu	(13)	297	216	3445470
1416	16.5	13.2	2.4	chr6	112073785	112074039	(58731940)	C	AluJo	SINE/Alu	(25)	287	1	3476604
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
1706	20.8	14.6	0.5	chr6	124917781	124918185	(45887794)	+	MER70A	LTR/ERVL	1	472	(0)	3493576
314	26.7	8.5	0.6	chr6	136969072	136969233	(33836746)	+	L3	LINE/CR1	3634	3809	(290)	3510771
347	27.6	6.1	1.9	chr6	136969257	136969412	(33836567)	C	MIR3	SINE/MIR	(6)	202	47	3510772
2304	19.3	1.2	1.2	chr6	139355909	139356317	(31449662)	C	MER70B	LTR/ERVL	(102)	476	68	3514524
627	18.1	1.5	1.3	chr6	139356317	139356447	(31449532)	C	FRAM	SINE/Alu	(0)	133	1	3514525
2266	9.6	0.0	0.7	chr6	139356463	139356754	(31449225)	C	AluSc	SINE/Alu	(19)	290	1	3514526
58	29.8	0.6	0.0	chr6	150016429	150016599	(20789380)	+	(CA)n	Simple_repeat	1	172	(0)	3529519
37	0.0	0.0	0.0	chr6	159053398	159053429	(11752550)	+	(GT)n	Simple_repeat	1	32	(0)	3543591
1854	23.1	3.3	0.0	chr6	167712973	167713414	(3092565)	C	MER70B	LTR/ERVL	(102)	476	20	3554686
8195	14.9	1.7	1.0	chr6	169037380	169039667	(1766312)	+	L1PB4	LINE/L1	3852	6155	(1)	3556071
182	24.7	1.3	0.0	chr6	170452770	170453217	(352762)	+	(GT)n	Simple_repeat	1	454	(0)	3557445
112	24.9	0.7	1.7	chr7	4083573	4083862	(155262111)	+	(CCTC)n	Simple_repeat	1	292	(0)	3564226
1452	16.5	5.3	4.3	chr7	24587392	24587670	(134758303)	C	AluJr	SINE/Alu	(24)	288	7	3594131
780	17.1	0.0	0.0	chr7	24965727	24965843	(134380130)	C	AluJr	SINE/Alu	(188)	124	8	3594668
225	20.4	3.6	0.0	chr7	24965859	24965912	(134380061)	+	MER5A	DNA/hAT-Charlie	133	188	(1)	3594669
3163	5.3	1.5	0.8	chr7	26125285	26125681	(133220292)	+	MLT2A1	LTR/ERVL	1	400	(44)	3596465
2463	14.2	2.0	1.8	chr7	26125677	26126069	(133219904)	C	MER70B	LTR/ERVL	(184)	394	1	3596466
243	26.7	6.2	0.0	chr7	29356684	29356758	(129989215)	+	MIR3	SINE/MIR	121	200	(8)	3601472
384	15.6	3.0	0.0	chr7	57489851	57489914	(101856059)	+	AluJo	SINE/Alu	225	290	(22)	3642536
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
84	11.5	0.0	0.0	chr7	65489745	65489886	(93856087)	+	(CCATT)n	Simple_repeat	1	142	(0)	3647902
383	14.3	3.1	0.0	chr7	65489887	65489949	(93856024)	C	AluYj4	SINE/Alu	(22)	289	225	3647903
85	11.3	0.7	0.6	chr7	65489965	65490119	(93855854)	+	(TTCCA)n	Simple_repeat	1	156	(0)	3647904
2168	13.2	3.5	0.0	chr7	68620559	68620860	(90725113)	+	AluSq2	SINE/Alu	1	313	(0)	3654854
1876	18.8	0.0	1.0	chr7	68621069	68621371	(90724602)	C	AluJb	SINE/Alu	(11)	301	2	3654855
77	18.9	2.1	3.1	chr7	69373248	69373434	(89972539)	+	GA-rich	Low_complexity	1	191	(0)	3656526
502	12.2	12.9	0.0	chr7	69373499	69373572	(89972401)	+	AluJb	SINE/Alu	198	282	(30)	3656527
30	0.0	0.0	0.0	chr7	77383319	77383344	(81962629)	+	(CA)n	Simple_repeat	1	26	(0)	3673669
364	26.4	3.3	0.2	chr7	92830977	92831081	(66514892)	C	MIRc	SINE/MIR	(6)	262	149	3694477
741	16.0	7.2	10.9	chr7	93722493	93722667	(65623306)	C	AluJo	SINE/Alu	(16)	296	129	3695637
400	10.8	0.2	2.5	chr7	98810993	98811637	(60534336)	+	(TGG)n	Simple_repeat	1	646	(0)	3703453
642	12.8	0.0	1.1	chr7	101364343	101364436	(57981537)	C	FLAM_C	SINE/Alu	(12)	131	39	3708617
187	28.8	9.1	0.0	chr7	101364442	101364521	(57981452)	C	MIRc	SINE/MIR	(64)	204	117	3708618
509	25.0	11.3	2.6	chr7	106014865	106015057	(53330916)	C	L1ME4c	LINE/L1	(366)	464	253	3716959
295	37.0	6.8	4.0	chr7	106015306	106015719	(53330254)	+	L2c	LINE/L2	2729	3157	(230)	3716960
291	8.3	0.0	0.0	chr7	118824737	118824772	(40521201)	C	MER50-int	LTR/ERV1	(7163)	42	7	3734443
4020	14.6	3.9	1.0	chr7	118824773	118825473	(40520500)	C	MER50	LTR/ERV1	(12)	722	1	3734443
2429	21.7	0.6	1.3	chr7	119606293	119606767	(39739206)	+	MER70A	LTR/ERVL	1	472	(0)	3735351
16	24.5	0.0	0.0	chr7	119606815	119606857	(39739116)	+	A-rich	Low_complexity	1	43	(0)	3735352
1136	25.5	5.2	3.4	chr7	138498934	138499259	(20846714)	C	L1ME3B	LINE/L1	(3478)	2668	2336	3763717
2088	20.3	7.8	3.7	chr7	138499311	138499766	(20846207)	C	MER70B	LTR/ERVL	(102)	476	1	3763747
2259	9.8	0.3	0.7	chr7	140442817	140443112	(18902861)	+	AluSq2	SINE/Alu	1	295	(18)	3767454
16	15.5	2.8	0.0	chr7	140443115	140443150	(18902823)	+	(TATTAA)n	Simple_repeat	1	37	(0)	3767455
666	23.5	15.2	0.9	chr7	140443151	140443369	(18902604)	C	MIR	SINE/MIR	(0)	262	7	3767456
1496	14.3	11.6	0.0	chr7	140717284	140717542	(18628431)	C	AluJb	SINE/Alu	(15)	297	5	3768073
359	35.8	4.3	2.9	chr7	143957757	143957963	(15388010)	C	MIRb	SINE/MIR	(56)	212	3	3772538
1667	22.3	5.0	1.8	chr7	147337108	147337491	(12008482)	C	MER70B	LTR/ERVL	(137)	441	45	3777130
1373	22.2	11.6	2.8	chr7	147339169	147339590	(12006383)	+	MSTA1	LTR/ERVL-MaLR	1	464	(1)	3777133
9290	16.8	7.8	6.3	chr7	149357224	149359303	(9986670)	C	MER52D	LTR/ERV1	(2)	2121	8	3780559
2651	17.9	1.1	0.9	chr7	149359304	149359743	(9986230)	C	MER70B	LTR/ERVL	(137)	441	1	3780558
328	16.4	7.8	3.8	chr7	150003183	150004275	(9341698)	+	(GT)n	Simple_repeat	1	1178	(0)	3781444
322	21.0	1.2	4.7	chr7	151935272	151935356	(7410617)	C	L1ME3F	LINE/L1	(11)	6232	6151	3784281
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
3278	22.1	7.3	1.9	chr8	15594296	15594733	(129543903)	C	L1MEc	LINE/L1	(1455)	1297	505	3815627
2121	23.6	4.0	0.4	chr8	15594734	15595188	(129543448)	C	MER70A	LTR/ERVL	(0)	472	1	3815629
3278	21.4	7.6	2.1	chr8	15595189	15595642	(129542994)	C	L1MEc	LINE/L1	(5896)	504	39	3815627
16085	19.1	7.0	1.9	chr8	19367928	19372405	(125766231)	C	L1MA4	LINE/L1	(1054)	6508	1776	3821108
2320	18.5	5.1	3.5	chr8	21349319	21349782	(123788854)	+	MER70A	LTR/ERVL	1	472	(0)	3824291
1155	27.9	11.8	0.7	chr8	27006191	27006581	(118132055)	C	MER70B	LTR/ERVL	(143)	435	1	3833666
2175	13.2	0.0	0.0	chr8	48492779	48493074	(96645562)	+	AluSc	SINE/Alu	1	296	(13)	3863373
1742	21.2	6.7	7.8	chr8	48493075	48493382	(96645254)	+	MLT1D	LTR/ERVL-MaLR	197	504	(1)	3863372
4413	21.6	9.4	2.9	chr8	48493383	48493585	(96645051)	C	L1MB7	LINE/L1	(7296)	221	12	3863366
231	36.2	4.1	7.1	chr8	48493602	48493827	(96644809)	+	Charlie15a	DNA/hAT-Charlie	1	219	(5)	3863374
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
195	36.3	8.8	1.6	chr8	61725177	61725302	(83413334)	C	L2c	LINE/L2	(9)	3378	3243	3881011
479	30.4	4.2	1.2	chr8	61725397	61725556	(83413080)	C	MIR3	SINE/MIR	(5)	203	39	3881012
634	25.1	3.0	6.3	chr8	61725561	61725647	(83412989)	+	MER106A	DNA/hAT-Charlie	3	94	(142)	3881013
1698	18.6	9.3	1.9	chr8	61725648	61725942	(83412694)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	80	3881014
589	18.2	13.3	0.7	chr8	66991818	66991955	(78146681)	C	MER5A1	DNA/hAT-Charlie	(1)	165	8	3888489
759	15.9	3.4	4.4	chr8	70200599	70200772	(74937864)	+	L1MB1	LINE/L1	5819	6100	(80)	3893428
1758	18.0	3.3	1.7	chr8	70200773	70201072	(74937564)	+	AluJo	SINE/Alu	1	305	(7)	3893429
463	12.6	7.8	13.1	chr8	70201073	70201156	(74937480)	+	L1MB1	LINE/L1	6101	6180	(0)	3893428
571	32.5	3.8	7.4	chr8	79026876	79027101	(66111535)	+	MLT1I-int	LTR/ERVL-MaLR	6	224	(1163)	3905420
2191	19.6	5.1	1.8	chr8	79027102	79027557	(66111079)	+	MER70A	LTR/ERVL	1	472	(0)	3905421
571	32.5	3.8	7.4	chr8	79027558	79027682	(66110954)	+	MLT1I-int	LTR/ERVL-MaLR	225	344	(1043)	3905420
298	29.0	3.1	1.6	chr8	85659943	85660068	(59478568)	C	L1ME4b	LINE/L1	(0)	892	765	3914925
322	27.6	0.0	0.0	chr8	85660141	85660227	(59478409)	C	MLT1F1	LTR/ERVL-MaLR	(482)	87	1	3914926
4592	9.3	0.1	1.5	chr8	85660229	85660904	(59477732)	C	L1P1	LINE/L1	(2973)	3173	2507	3914927
1799	16.7	0.7	2.9	chr8	100554436	100554747	(44583889)	+	AluJb	SINE/Alu	1	305	(7)	3936987
7708	6.8	0.6	0.1	chr8	100968630	100969590	(44169046)	+	LTR13A	LTR/ERVK	1	966	(0)	3937869
2234	18.1	5.3	6.0	chr8	100969591	100969854	(44168782)	C	L1ME1	LINE/L1	(615)	5564	5283	3937861
762	24.3	11.4	0.0	chr8	102230775	102230992	(42907644)	C	MIR	SINE/MIR	(0)	262	17	3939992
284	33.6	0.7	3.2	chr8	108739365	108739518	(36399118)	+	MLT1J-int	LTR/ERVL-MaLR	143	292	(1095)	3949809
484	27.8	11.0	6.9	chr8	108739527	108739814	(36398822)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	246	3949810
2948	2.6	0.0	0.3	chr8	113518109	113518455	(31620181)	C	L1PA4	LINE/L1	(8)	6147	5802	3956234
283	2.8	0.0	0.0	chr8	113518456	113518491	(31620145)	+	L1P3	LINE/L1	5782	5817	(355)	3956235
705	19.7	2.8	0.0	chr8	113518492	113518628	(31620008)	+	MER50	LTR/ERV1	582	722	(12)	3956233
10122	15.6	5.9	2.6	chr8	113518711	113520471	(31618165)	+	MER50-int	LTR/ERV1	1	1824	(5381)	3956233
194	28.1	1.5	1.5	chr8	134483877	134483941	(10654695)	C	L2b	LINE/L2	(0)	3375	3311	3992390
13	3.1	2.3	13.3	chr8	134483981	134484024	(10654612)	+	(TTCTCC)n	Simple_repeat	1	45	(0)	3992391
261	41.3	9.6	3.0	chr8	135502261	135502629	(9636007)	+	L2c	LINE/L2	2926	3321	(66)	3994120
1033	19.3	0.0	1.0	chr8	135502884	135503077	(9635559)	C	MER3	DNA/hAT-Charlie	(17)	192	1	3994121
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
280	14.8	8.9	6.2	chr9	590307	590371	(137804346)	+	MIR3	SINE/MIR	125	191	(17)	4009424
2478	17.9	0.9	3.2	chr9	1616268	1616739	(136777978)	C	MER70B	LTR/ERVL	(117)	461	1	4010997
1871	16.9	0.7	0.0	chr9	4457083	4457372	(133937345)	+	AluJr	SINE/Alu	3	294	(18)	4015087
2253	9.2	0.3	2.3	chr9	6707148	6707453	(131687264)	+	AluSp	SINE/Alu	2	301	(12)	4018558
2171	17.9	1.0	8.5	chr9	6707454	6707771	(131686946)	+	MER70B	LTR/ERVL	79	390	(188)	4018556
9061	16.9	2.6	2.0	chr9	13327520	13328859	(125065858)	+	L1M2	LINE/L1	3319	4646	(1497)	4027475
1094	16.3	1.5	0.0	chr9	13328861	13329062	(125065655)	C	L1M2	LINE/L1	(1268)	4875	4671	4027477
2206	18.2	10.2	1.6	chr9	34671264	34671693	(103723024)	C	MER70A	LTR/ERVL	(0)	472	2	4057768
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
253	26.1	0.0	0.0	chr9	70038639	70038703	(68356014)	+	MER102a	DNA/hAT-Charlie	90	154	(176)	4082516
77	8.8	0.0	0.0	chr9	76175202	76175310	(62219407)	+	(GAATG)n	Simple_repeat	1	109	(0)	4092041
20	6.9	0.0	0.0	chr9	76175311	76175341	(62219376)	+	(AGAAC)n	Simple_repeat	1	31	(0)	4092042
259	12.7	0.0	0.0	chr9	79743087	79743141	(58651576)	+	L1MA8	LINE/L1	5553	5607	(582)	4097680
740	19.4	0.0	0.8	chr9	79743145	79743268	(58651449)	+	FLAM_A	SINE/Alu	7	129	(13)	4097681
1082	16.5	0.5	0.0	chr9	79743269	79743468	(58651249)	+	L1MA8	LINE/L1	5589	5789	(502)	4097680
491	30.2	6.0	2.8	chr9	82447189	82447342	(55947375)	+	MIRb	SINE/MIR	51	205	(63)	4101486
2249	22.4	1.9	0.4	chr9	82447343	82447805	(55946912)	+	MER70A	LTR/ERVL	3	472	(0)	4101487
491	30.2	6.0	2.8	chr9	82447806	82447861	(55946856)	+	MIRb	SINE/MIR	206	268	(0)	4101486
14	20.6	0.0	8.5	chr9	88388989	88389047	(50005670)	+	G-rich	Low_complexity	1	59	(0)	4111079
1258	25.0	9.8	0.3	chr9	92160834	92161194	(46233523)	+	MER70A	LTR/ERVL	5	403	(69)	4116277
2377	24.5	5.5	11.1	chr9	92161257	92162103	(46232614)	+	L1MDa	LINE/L1	741	1478	(5155)	4116278
2507	6.4	0.0	0.3	chr9	94645292	94645586	(43749131)	+	AluY	SINE/Alu	1	294	(17)	4120001
479	27.6	13.2	5.6	chr9	94645587	94645686	(43749031)	C	L2b	LINE/L2	(564)	2855	2730	4120000
233	32.1	2.8	1.9	chr9	94645717	94645824	(43748893)	C	CR1-3_Croc	LINE/CR1	(836)	2769	2661	4120002
351	23.3	15.6	4.2	chr9	97742559	97742583	(40652134)	C	MER113A	DNA/hAT-Charlie	(44)	270	248	4125037
2673	17.2	1.7	0.0	chr9	97742584	97743047	(40651670)	+	MER70A	LTR/ERVL	1	472	(0)	4125038
351	23.3	15.6	4.2	chr9	97743048	97743236	(40651481)	C	MER113A	DNA/hAT-Charlie	(67)	247	27	4125037
2057	14.7	3.2	0.0	chr9	98644560	98644859	(39749858)	+	AluSx1	SINE/Alu	1	310	(2)	4126926
2870	16.6	1.5	2.9	chr9	98644860	98645245	(39749472)	+	MER70B	LTR/ERVL	86	476	(102)	4126925
20177	12.1	0.5	1.3	chr9	109572333	109574358	(28820359)	+	L1PA15	LINE/L1	4794	6785	(0)	4144770
300	24.6	0.0	0.0	chr9	109574371	109574435	(28820282)	C	MER5A1	DNA/hAT-Charlie	(101)	65	1	4144772
1712	17.9	1.7	1.1	chr9	111093115	111093399	(27301318)	+	AluJb	SINE/Alu	1	287	(25)	4147288
30	18.1	1.5	1.5	chr9	111093402	111093467	(27301250)	+	GA-rich	Low_complexity	1	67	(0)	4147289
317	22.1	12.8	0.0	chr9	111093497	111093591	(27301126)	+	L1MEf	LINE/L1	3395	3503	(2643)	4147279
5097	25.2	16.6	4.8	chr9	125289243	125290726	(13103991)	C	L2a	LINE/L2	(552)	2867	1316	4174365
753	28.0	8.3	3.5	chr9	129409897	129410233	(8984484)	+	MLT1C	LTR/ERVL-MaLR	34	396	(71)	4182751
225	17.4	1.6	0.0	chr9	129410256	129410685	(8984032)	+	(CACCAT)n	Simple_repeat	1	437	(0)	4182753
270	19.9	0.7	0.2	chr9	130958574	130959111	(7435606)	+	(CACCAC)n	Simple_repeat	1	542	(0)	4186091
286	8.8	9.5	2.4	chr9	134182441	134183092	(4211625)	+	(TG)n	Simple_repeat	1	714	(0)	4191688
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
2176	21.5	2.5	4.8	chrX	4101874	4102356	(151938539)	C	MER70A	LTR/ERVL	(0)	472	1	4366176
2935	25.3	13.5	3.2	chrX	18973305	18973682	(137067213)	C	L1MEi	LINE/L1	(2185)	3961	3566	4390475
2319	24.3	11.3	20.5	chrX	18973685	18974507	(137066388)	+	L2	LINE/L2	1176	2098	(1321)	4390477
298	33.3	8.8	4.6	chrX	24370819	24370991	(131669904)	C	MIRb	SINE/MIR	(58)	210	30	4399382
602	27.7	5.6	1.5	chrX	24371008	24371212	(131669683)	C	LTR78B	LTR/ERV1	(2)	1294	1081	4399383
3487	15.7	4.0	0.2	chrX	28310735	28311353	(127729542)	+	LTR48B	LTR/ERV1	1	644	(0)	4405037
4285	14.0	3.9	1.4	chrX	28311422	28312125	(127728770)	C	MER50	LTR/ERV1	(12)	722	1	4405038
446	31.0	7.8	4.9	chrX	53284503	53284780	(102756115)	+	L2b	LINE/L2	3078	3408	(18)	4443392
1727	13.5	1.3	9.6	chrX	53346062	53346394	(102694501)	+	AluJo	SINE/Alu	2	306	(6)	4443533
621	26.0	12.4	0.5	chrX	53346395	53346599	(102694296)	C	MIRc	SINE/MIR	(5)	263	28	4443534
2309	10.4	0.0	0.3	chrX	54318077	54318373	(101722522)	+	AluSz6	SINE/Alu	1	296	(16)	4445469
3827	14.3	2.5	8.9	chrX	54318374	54318425	(101722470)	+	L1MB4	LINE/L1	6141	6180	(0)	4445466
1625	14.8	10.8	0.0	chrX	54318453	54318709	(101722186)	+	AluJo	SINE/Alu	4	291	(21)	4445470
2299	10.4	0.3	0.3	chrX	54318781	54319077	(101721818)	C	AluSx1	SINE/Alu	(15)	297	1	4445471
12602	20.4	3.7	5.1	chrX	95006211	95009672	(61031223)	C	L1MC1	LINE/L1	(749)	5595	2184	4487509
2725	18.4	3.4	1.9	chrX	112762197	112762657	(43278238)	C	MER70A	LTR/ERVL	(4)	468	1	4511862
4379	15.3	1.6	1.4	chrX	113893843	113894552	(42146343)	+	MER50	LTR/ERV1	12	722	(12)	4513347
963	19.4	5.6	1.9	chrX	113894594	113894851	(42146044)	C	L1M4b	LINE/L1	(3991)	2876	2609	4513346
3903	18.1	6.8	4.6	chrX	113894849	113895768	(42145127)	C	L1M4b	LINE/L1	(4968)	1899	958	4513346
279	28.3	3.9	4.8	chrX	114710018	114710121	(41330774)	+	MIR3	SINE/MIR	30	132	(76)	4514427
617	22.3	0.5	0.4	chrX	114710123	114710270	(41330625)	+	FLAM_C	SINE/Alu	7	211	(90)	4514428
233	35.6	15.9	1.8	chrX	114710422	114710647	(41330248)	+	MIRb	SINE/MIR	4	267	(1)	4514429
1002	15.7	0.0	0.0	chrX	115278826	115279016	(40761879)	+	L1MC	LINE/L1	3835	4025	(2121)	4515209
808	19.9	0.7	0.0	chrX	115279100	115279250	(40761645)	C	FRAM	SINE/Alu	(0)	176	25	4515210
315	36.0	2.4	6.0	chrX	115279374	115279506	(40761389)	C	L2c	LINE/L2	(1)	3374	3247	4515211
1674	24.4	5.5	1.7	chrX	117610825	117611291	(38429604)	+	MLT1E2	LTR/ERVL-MaLR	141	626	(1)	4517937
547	34.2	10.6	1.1	chrX	130565198	130565682	(25475213)	C	L2c	LINE/L2	(29)	3358	2822	4536752
13	14.3	2.9	2.9	chrX	130565904	130565937	(25474958)	+	A-rich	Low_complexity	1	35	(0)	4536753
275	20.9	4.3	0.0	chrY	10664501	10664567	(46562848)	C	Alu	SINE/Alu	(8)	293	224	4587924
149	10.5	1.4	1.4	chrY	10664579	10664856	(46562559)	+	(CCATT)n	Simple_repeat	1	282	(0)	4587925
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
6112	24.5	0.6	0.4	chrY	10942264	10945531	(46281884)	+	(TTCCA)n	Simple_repeat	1	3273	(0)	4588495
314	22.4	2.9	0.0	chrY	10950282	10950348	(46277067)	C	AluYj4	SINE/Alu	(18)	293	225	4588504
235	26.3	10.9	0.0	chrY	10950303	10950359	(46277056)	+	SVA_A	Retroposon/SVA	332	395	(992)	4588505
4917	25.0	0.5	0.3	chrY	10950360	10951162	(46276253)	+	(TCCAC)n	Simple_repeat	1	804	(0)	4588506
301	17.0	0.0	0.0	chrY	10958417	10958463	(46268952)	C	AluYj4	SINE/Alu	(41)	270	224	4588520
226	15.8	0.0	5.0	chrY	10958430	10958469	(46268946)	+	SVA_F	Retroposon/SVA	332	369	(1006)	4588521
1259	23.0	0.4	0.6	chrY	10958474	10959925	(46267490)	+	(CATTC)n	Satellite	1	1451	(0)	4588522
39	30.8	0.7	2.0	chrY	10967363	10967485	(46259930)	+	(CCATT)n	Simple_repeat	1	122	(0)	4588544
88	4.3	0.0	0.0	chrY	10967486	10967581	(46259834)	+	(TCCAT)n	Simple_repeat	1	96	(0)	4588545
39	30.8	0.7	2.0	chrY	10967582	10967606	(46259809)	+	(CCATT)n	Simple_repeat	3	27	(0)	4588546
344	18.8	1.5	0.0	chrY	10967607	10967670	(46259745)	C	AluYj4	SINE/Alu	(23)	288	224	4588547
285	19.0	1.7	3.3	chrY	10967630	10967689	(46259726)	+	SVA_C	Retroposon/SVA	336	394	(990)	4588548
73	12.0	0.0	0.0	chrY	10973565	10973692	(46253723)	+	(TCCAT)n	Simple_repeat	1	128	(0)	4588565
258	28.4	0.0	0.0	chrY	10974044	10974110	(46253305)	C	AluJb	SINE/Alu	(11)	291	225	4588566
371	24.0	2.8	0.0	chrY	10988388	10988478	(46238937)	C	AluSx	SINE/Alu	(13)	289	188	4588607
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
320	23.8	1.6	0.5	chrY	11031071	11031156	(46196259)	C	AluY	SINE/Alu	(9)	293	208	4588745
338	21.0	6.9	0.0	chrY	11281975	11282055	(45945360)	C	MER21C	LTR/ERVL	(822)	116	30	4589057
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157
10957	28.1	0.5	0.1	chrY	26643208	26653351	(30574064)	+	(AATGG)n	Simple_repeat	1	10181	(0)	4607159