199	31.8	1.1	0.2	chr1	4144324	4144933	(244811489)	+	(TCA)n	Simple_repeat	1	617	(0)	4878
140	18.5	0.7	0.0	chr1	4302955	4302983	(244653439)	+	(TTCCA)n	Simple_repeat	1	31	(0)	5121
64	6.2	1.1	1.1	chr1	4302984	4303071	(244653351)	+	(GTTCC)n	Simple_repeat	1	89	(0)	5122
140	18.5	0.7	0.0	chr1	4303072	4303312	(244653110)	+	(TTCCA)n	Simple_repeat	2	242	(0)	5123
345	31.4	3.8	0.0	chr1	13665592	13665693	(235290729)	+	MER81	DNA/hAT-Blackjack	1	106	(8)	21846
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
3190	28.1	9.5	7.6	chr1	42057495	42058265	(206898157)	+	L1ME3Cz	LINE/L1	919	1769	(5334)	81869
161	24.2	4.5	4.3	chr1	54119771	54120464	(194835958)	+	(CACAAC)n	Simple_repeat	1	725	(0)	104453
15	23.6	10.1	1.8	chr1	54120378	54120476	(194835946)	+	(ATC)n	Simple_repeat	1	109	(0)	104454
386	10.9	0.0	0.0	chr1	54442094	54442148	(194514274)	+	THE1D	LTR/ERVL-MaLR	327	381	(0)	105088
247	34.1	2.2	2.2	chr1	54442160	54442294	(194514128)	+	MIR3	SINE/MIR	20	154	(54)	105089
214	27.4	9.3	2.5	chr1	54442427	54442546	(194513876)	+	L2c	LINE/L2	2074	2202	(1217)	105090
342	32.1	0.8	0.0	chr1	59256982	59257112	(189699310)	C	LTR33A_	LTR/ERVL	(7)	513	382	114531
343	35.3	2.0	0.7	chr1	59257246	59257396	(189699026)	C	LTR33A_	LTR/ERVL	(358)	173	21	114531
304	27.7	7.9	7.8	chr1	91166558	91166807	(157789615)	C	MLT1L	LTR/ERVL-MaLR	(52)	543	322	162372
1270	19.3	0.5	0.5	chr1	111032629	111032847	(137923575)	+	HUERS-P3-int	LTR/ERV1	8701	8919	(0)	191029
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
19	14.4	0.0	0.0	chr1	145280999	145281039	(103675383)	+	(G)n	Simple_repeat	1	41	(0)	210763
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
875	5.4	0.0	0.0	chr1	185681053	185681164	(63275258)	C	L1PA3	LINE/L1	(3)	6152	6041	274626
12	11.2	6.9	0.0	chr1	185681320	185681348	(63275074)	+	(AAT)n	Simple_repeat	1	31	(0)	274627
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
513	28.7	2.9	0.6	chr1	202204190	202205936	(46750486)	+	(CA)n	Simple_repeat	1	1797	(0)	297476
455	13.8	6.0	5.0	chr1	202624116	202625415	(46331007)	+	(GT)n	Simple_repeat	1	1378	(0)	298201
306	16.2	3.2	1.1	chr1	204195133	204195753	(44760669)	+	(CA)n	Simple_repeat	1	641	(0)	301162
1011	15.7	6.4	2.5	chr1	205972783	205975447	(42980975)	+	(CA)n	Simple_repeat	1	2768	(0)	304363
412	21.6	3.0	2.9	chr1	206923601	206924793	(42031629)	+	(GT)n	Simple_repeat	1	1229	(0)	305929
346	26.7	8.7	0.8	chr1	210654377	210654493	(38301929)	+	L2b	LINE/L2	3245	3371	(4)	311476
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
318	16.6	0.0	4.6	chr1	226959973	226960669	(21995753)	+	(GTG)n	Simple_repeat	1	697	(0)	336752
246	19.8	4.9	0.9	chr1	235078154	235078768	(13877654)	+	(TG)n	Simple_repeat	1	645	(0)	348979
963	24.9	7.7	1.5	chr1	236085380	236085709	(12870713)	C	L2a	LINE/L2	(137)	3289	2938	350965
100	29.5	3.4	1.5	chr1	236085710	236086161	(12870261)	+	(TG)n	Simple_repeat	1	460	(0)	350966
16	5.2	0.0	0.0	chr1	236086225	236086244	(12870178)	+	(GT)n	Simple_repeat	1	20	(0)	350967
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
177	36.5	0.4	0.7	chr1	241306129	241306853	(7649569)	+	(CA)n	Simple_repeat	1	728	(0)	359096
18	14.9	0.0	2.6	chr10	20855508	20855546	(112941876)	+	(AACAA)n	Simple_repeat	1	39	(0)	402608
243	24.4	16.9	11.2	chr10	77520285	77520533	(56276889)	+	MIRb	SINE/MIR	3	268	(0)	486085
1920	9.6	1.5	3.9	chr10	81081605	81081886	(52715536)	C	AluSq2	SINE/Alu	(2)	311	37	492115
11581	22.9	3.5	2.2	chr10	81081887	81084337	(52713085)	C	L1PA15	LINE/L1	(5145)	3010	566	492114
18386	14.2	2.2	0.6	chr10	98663410	98669897	(35127525)	+	L1PA16	LINE/L1	1	6634	(0)	520319
11060	19.5	4.1	4.2	chr10	99041171	99043202	(34754220)	+	L1PA16	LINE/L1	829	3129	(5032)	520861
2430	8.8	0.0	2.2	chr10	99043203	99043519	(34753903)	+	AluY	SINE/Alu	1	310	(1)	520862
743	20.1	3.0	0.2	chr10	123254330	123255943	(10541479)	+	(CAC)n	Simple_repeat	1	1663	(0)	560024
2566	6.7	0.0	1.9	chr10	125904844	125905159	(7892263)	+	AluY	SINE/Alu	1	310	(1)	564181
693	8.8	21.1	4.0	chr10	125905170	125905294	(7892128)	+	FAM	SINE/Alu	20	171	(14)	564182
528	22.7	7.4	0.6	chr10	125905314	125905490	(7891932)	C	L1MEg	LINE/L1	(2550)	3596	3407	564180
231	23.5	6.9	1.2	chr10	125905712	125905793	(7891629)	C	L1M5	LINE/L1	(2474)	3672	3586	564183
627	20.9	4.9	1.1	chr10	130790008	130791733	(3005689)	+	(AC)n	Simple_repeat	1	1810	(0)	569892
260	28.6	0.9	5.1	chr10	131850544	131850661	(1946761)	+	HAL1	LINE/L1	1441	1553	(954)	571001
101	23.0	6.5	5.3	chr10	132364294	132364784	(1432638)	+	(CACTCA)n	Simple_repeat	1	557	(29)	571577
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
8593	14.7	3.6	0.3	chr11	22243904	22245360	(112841262)	C	L1PA16	LINE/L1	(4014)	2489	983	606650
374	26.1	10.2	4.1	chr11	22245343	22245662	(112840960)	C	L1MC4	LINE/L1	(5124)	1091	750	606651
12942	22.0	4.0	1.8	chr11	37941508	37946926	(97139696)	C	L1PB4	LINE/L1	(377)	6947	1626	630561
809	19.6	5.0	5.5	chr11	46897101	46897283	(88189339)	C	MER91B	DNA/hAT-Tip100	(0)	190	9	644864
29	10.8	0.0	0.0	chr11	46897335	46897384	(88189238)	+	(T)n	Simple_repeat	1	50	(0)	644865
6148	3.0	4.8	1.7	chr11	46897387	46898203	(88188419)	C	SVA_D	Retroposon/SVA	(13)	1373	531	644866
2337	9.2	0.0	0.3	chr11	62841037	62841341	(72245281)	+	AluSc	SINE/Alu	1	304	(5)	662921
1365	9.9	0.0	6.1	chr11	62841342	62841418	(72245204)	+	AluSc8	SINE/Alu	131	199	(112)	662920
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
993	24.6	11.7	2.1	chr11	64980657	64980996	(70105626)	+	L2a	LINE/L2	2286	2662	(757)	666574
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
196	21.9	18.8	0.0	chr11	72725057	72725138	(62361484)	C	MIR3	SINE/MIR	(74)	134	34	680464
37	5.1	0.0	0.0	chr11	72725296	72725336	(62361286)	+	(CT)n	Simple_repeat	1	41	(0)	680465
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
13015	17.1	2.5	2.1	chr11	107738764	107742272	(27344350)	C	L1P4a	LINE/L1	(2956)	3527	3	735401
83	17.8	0.0	1.2	chr11	133354200	133354359	(1732263)	+	(TGG)n	Simple_repeat	1	160	(0)	775811
365	26.6	15.9	0.0	chr11	133354418	133354560	(1732062)	C	MIR	SINE/MIR	(78)	184	15	775812
391	10.0	8.4	0.8	chr11	133901789	133902587	(1184035)	+	(CA)n	Simple_repeat	1	866	(0)	776518
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
11291	19.6	3.4	1.3	chr12	19571074	19574397	(113700912)	C	L1PREC2	LINE/L1	(3307)	4834	1127	808439
216	36.0	1.0	2.0	chr12	23055282	23055383	(110219926)	C	L2c	LINE/L2	(315)	3072	2972	813097
7499	13.8	3.1	1.7	chr12	30806991	30807917	(102467392)	+	L1M3f	LINE/L1	1247	2187	(4378)	824226
782	30.2	6.8	2.5	chr12	71510612	71511186	(61764123)	C	L2c	LINE/L2	(77)	3310	2704	882410
238	22.6	0.0	7.0	chr12	71511195	71511251	(61764058)	+	L2	LINE/L2	2331	2383	(1036)	882411
202	28.8	1.7	3.3	chr12	71511252	71511312	(61763997)	+	MER5A	DNA/hAT-Charlie	1	60	(129)	882412
2428	9.4	0.7	0.0	chr12	72570299	72570605	(60704704)	+	AluSx1	SINE/Alu	1	309	(3)	883989
242	29.9	3.6	7.0	chr12	72570764	72570878	(60704431)	+	MER91C	DNA/hAT-Tip100	11	121	(19)	883990
36	2.7	0.0	0.0	chr12	113080590	113080627	(20194682)	+	(GAATG)n	Simple_repeat	1	38	(0)	950746
12	8.7	0.0	3.6	chr12	113080628	113080649	(20194660)	+	(GAATA)n	Simple_repeat	1	21	(0)	950747
1954	15.0	0.7	0.3	chr12	113080696	113080989	(20194320)	+	AluJo	SINE/Alu	3	297	(15)	950748
221	39.6	0.4	0.3	chr12	114903718	114904841	(18370468)	+	(GT)n	Simple_repeat	1	1129	(0)	954851
2493	16.9	6.8	8.8	chr12	119744822	119745613	(13529696)	+	L1MEc	LINE/L1	1089	1863	(4537)	965419
1185	8.3	1.8	0.0	chr12	119745646	119745813	(13529496)	+	L1MA4	LINE/L1	6126	6296	(4)	965420
607	27.5	3.9	3.9	chr12	124334018	124334225	(8941084)	+	MIRb	SINE/MIR	16	223	(45)	975900
397	28.7	1.0	0.5	chr12	124438671	124439853	(8835456)	+	GA-rich	Low_complexity	1	1195	(0)	976059
211	25.0	2.4	2.4	chr12	130728206	130728864	(2546445)	+	(CACTCG)n	Simple_repeat	1	675	(0)	987117
1217	30.4	3.8	0.7	chr12	132268352	132268991	(1006318)	+	L1M5	LINE/L1	4946	5606	(573)	989279
13044	18.0	4.4	2.8	chr13	29800772	29804771	(84559557)	+	L1PREC2	LINE/L1	1386	5457	(2684)	1008648
264	28.6	0.1	0.4	chr13	35957907	35958600	(78405728)	+	(CAC)n	Simple_repeat	1	695	(0)	1017863
16	21.7	0.0	0.0	chr13	53250596	53250627	(61113701)	+	(T)n	Simple_repeat	1	32	(0)	1044380
3779	20.0	3.6	2.0	chr13	65378856	65379722	(48984606)	+	L1M4b	LINE/L1	1820	2703	(4164)	1059732
1800	21.6	6.7	4.6	chr13	66224563	66225061	(48139267)	C	MER67D	LTR/ERV1	(4)	510	1	1060777
466	28.2	11.7	5.8	chr13	66225062	66225158	(48139170)	+	MER20B	DNA/hAT-Charlie	152	276	(507)	1060776
2358	14.7	6.7	1.5	chr13	66225159	66225567	(48138761)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1060778
633	31.6	4.9	5.3	chr13	70203162	70203757	(44160571)	+	L1ME3D	LINE/L1	5468	6080	(162)	1065828
1042	25.5	12.0	0.9	chr13	70203758	70204074	(44160254)	+	LTR18A	LTR/ERVL	1	357	(0)	1065829
17	4.3	0.0	0.0	chr13	71879522	71879545	(42484783)	+	(ATAA)n	Simple_repeat	1	24	(0)	1068032
17	5.0	0.0	0.0	chr13	77752286	77752306	(36612022)	+	(T)n	Simple_repeat	1	21	(0)	1076623
20	18.6	0.0	0.0	chr13	100235279	100235315	(14129013)	+	A-rich	Low_complexity	1	37	(0)	1107643
425	26.5	15.8	0.0	chr14	24806168	24806385	(82237333)	C	MIRb	SINE/MIR	(8)	260	2	1134686
260	37.6	1.0	0.0	chr14	55707329	55707429	(51336289)	+	MIRc	SINE/MIR	166	267	(1)	1178168
17	14.9	0.0	0.0	chr14	55707430	55707460	(51336258)	+	(CAT)n	Simple_repeat	1	31	(0)	1178169
4393	20.3	9.9	3.7	chr14	55864289	55866369	(51177349)	C	L1PREC2	LINE/L1	(4620)	3535	4	1178432
220	21.6	2.7	0.0	chr14	64765806	64766316	(42277402)	+	(GT)n	Simple_repeat	1	525	(0)	1191875
17797	14.3	3.4	1.8	chr14	66605832	66610303	(40433415)	C	L1PA16	LINE/L1	(821)	5662	1107	1194826
1280	18.5	2.2	0.0	chr14	66610326	66610547	(40433171)	C	L1PA16	LINE/L1	(6270)	233	7	1194826
7517	18.6	7.1	3.1	chr14	81169670	81171382	(25872336)	+	L1P4a	LINE/L1	23	1809	(4694)	1220221
16193	20.2	4.6	1.8	chr14	86645626	86648201	(20395517)	+	L1PA16	LINE/L1	4	2684	(3930)	1227850
2709	15.9	2.4	1.5	chr14	94450207	94450666	(12593052)	+	MLT1C	LTR/ERVL-MaLR	1	464	(3)	1241154
284	14.4	5.4	0.2	chr14	94590958	94591535	(12452183)	+	(TCCAC)n	Simple_repeat	1	609	(0)	1241387
397	7.2	0.2	0.0	chr14	99927754	99928248	(7115470)	+	(GTG)n	Simple_repeat	1	496	(0)	1250850
2340	23.1	9.3	10.2	chr14	99928249	99928544	(7115174)	C	L1MC5	LINE/L1	(983)	8321	8256	1250837
339	31.4	13.0	4.6	chr14	100526401	100526610	(6517108)	+	MIRb	SINE/MIR	4	233	(35)	1252010
151	40.6	0.9	0.7	chr14	100526641	100527377	(6516341)	+	(ACC)n	Simple_repeat	1	744	(0)	1252011
245	34.1	0.5	2.8	chr14	105215162	105216188	(1827530)	+	(CA)n	Simple_repeat	1	1032	(0)	1259391
16087	19.8	3.2	2.4	chr15	55524461	55527519	(46463670)	C	L1PA15	LINE/L1	(3139)	5002	1912	1315726
187	32.5	4.9	13.8	chr15	56428624	56428848	(45562341)	+	Tigger19b	DNA/TcMar-Tigger	66	269	(281)	1317096
688	28.1	3.0	9.3	chr15	74515345	74515592	(27475597)	+	LTR78	LTR/ERV1	896	1131	(173)	1348988
2408	10.4	0.0	0.0	chr15	74515593	74515899	(27475290)	C	AluSc	SINE/Alu	(2)	307	1	1348991
251	30.5	17.3	0.0	chr15	77699142	77699309	(24291880)	+	MIR3	SINE/MIR	55	263	(5)	1354493
185	35.2	3.3	3.3	chr15	77699788	77699878	(24291311)	+	L2c	LINE/L2	3293	3383	(4)	1354494
64	12.6	0.8	3.2	chr16	5500073	5500194	(84838151)	+	(CCTC)n	Simple_repeat	1	123	(0)	1403414
35	11.0	0.0	0.0	chr16	5500196	5500255	(84838090)	+	(CATTC)n	Simple_repeat	1	60	(0)	1403415
1598	17.6	0.8	0.4	chr16	5500260	5500521	(84837824)	C	AluJr	SINE/Alu	(49)	263	1	1403416
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
377	20.6	0.0	0.0	chr16	34063794	34063861	(56274484)	+	AluYj4	SINE/Alu	224	291	(20)	1463563
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
48	4.8	0.0	8.7	chr16	34076982	34077084	(56261261)	+	(ATCAAATGGA)n	Simple_repeat	1	103	(0)	1463586
338	14.9	0.0	0.0	chr16	34085515	34085561	(56252784)	C	AluYj4	SINE/Alu	(39)	272	226	1463590
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
144	35.0	3.3	2.4	chr16	58087149	58088079	(32250266)	+	(CACATA)n	Simple_repeat	1	962	(0)	1486429
351	27.1	11.0	0.0	chr17	510520	510648	(82746793)	+	MIRb	SINE/MIR	61	205	(63)	1545286
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
14076	21.5	0.2	0.1	chr17	26878921	26879385	(56378056)	+	(TGGAA)n	Simple_repeat	4	470	(0)	1585978
354	19.1	1.6	0.0	chr17	26879386	26879448	(56377993)	+	AluYj4	SINE/Alu	224	287	(24)	1585979
14076	21.5	0.2	0.1	chr17	26879448	26880125	(56377316)	+	(TGGAA)n	Simple_repeat	1	678	(0)	1585980
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26935986	26936392	(56321049)	+	(GAATG)n	Satellite	1	409	(0)	1585984
1545	18.6	0.5	0.9	chr17	26937237	26937936	(56319505)	+	(GAATG)n	Satellite	5	705	(0)	1585990
395	19.4	1.6	0.0	chr17	26937941	26938002	(56319439)	+	AluSc	SINE/Alu	223	285	(24)	1585991
1545	18.6	0.5	0.9	chr17	26938006	26938444	(56318997)	+	(GAATG)n	Satellite	3	440	(0)	1585992
1545	18.6	0.5	0.9	chr17	26938538	26939277	(56318164)	+	(GAATG)n	Satellite	3	736	(0)	1585994
437	12.7	3.1	0.0	chr17	26939289	26939351	(56318090)	+	AluSz6	SINE/Alu	225	289	(23)	1585995
1545	18.6	0.5	0.9	chr17	26939351	26939821	(56317620)	+	(GAATG)n	Satellite	4	474	(0)	1585996
377	19.1	1.6	0.0	chr17	26939822	26939884	(56317557)	+	AluYj4	SINE/Alu	224	287	(24)	1585997
1545	18.6	0.5	0.9	chr17	26939888	26940398	(56317043)	+	(GAATG)n	Satellite	3	514	(0)	1585998
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
551	15.5	4.8	2.0	chr17	41632551	41633816	(41623625)	+	(GT)n	Simple_repeat	1	1327	(0)	1613928
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
20	20.1	1.3	7.5	chr17	50707671	50707749	(32549692)	+	(GCCCC)n	Simple_repeat	1	80	(0)	1632279
1670	18.5	13.6	1.7	chr17	55384665	55385071	(27872370)	C	MER31B	LTR/ERV1	(3)	463	1	1639539
1172	26.2	6.7	1.6	chr17	55385075	55385516	(27871925)	+	L2a	LINE/L2	2936	3401	(25)	1639540
1578	18.6	4.9	0.4	chr17	58631185	58631459	(24625982)	+	AluSz6	SINE/Alu	6	293	(19)	1645372
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
2291	9.7	0.0	0.0	chr17	58678873	58679171	(24578270)	+	AluSq2	SINE/Alu	2	300	(13)	1645510
300	23.6	12.9	12.1	chr17	58679172	58679272	(24578169)	+	MLT1D	LTR/ERVL-MaLR	199	292	(213)	1645507
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
192	36.1	2.8	0.6	chr17	79042841	79043792	(4213649)	+	(GT)n	Simple_repeat	1	979	(0)	1682898
361	15.8	6.9	1.8	chr17	80024286	80025222	(3232219)	+	(CA)n	Simple_repeat	1	1002	(0)	1684319
170	12.3	6.9	1.0	chr17	81742179	81742539	(1514902)	+	(CA)n	Simple_repeat	1	386	(0)	1686732
766	26.4	1.7	2.8	chr17	81973459	81973722	(1283719)	+	L1MC4	LINE/L1	6576	6859	(1183)	1686989
291	24.9	9.1	11.8	chr17	81973791	81973873	(1283568)	+	L1MC4	LINE/L1	7735	7815	(227)	1686989
2248	12.5	0.0	0.0	chr17	81973874	81974176	(1283265)	C	AluSx1	SINE/Alu	(7)	305	3	1686992
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
442	25.1	1.8	7.9	chr17	82670981	82671157	(586284)	C	HAL1	LINE/L1	(127)	2380	2215	1688062
2013	18.4	4.2	1.0	chr17	83127880	83128275	(129166)	+	LTR57	LTR/ERVL	1	409	(2)	1688590
540	3.0	2.1	1.6	chr18	10001	10631	(80362654)	+	(CCCTAA)n	Simple_repeat	1	644	(0)	1689081
9408	16.6	6.0	1.2	chr18	62721	63620	(80309665)	C	L1MA2	LINE/L1	(5003)	2562	1591	1689112
319	11.7	0.3	4.0	chr18	63621	64200	(80309085)	+	(CCCTAA)n	Simple_repeat	1	582	(0)	1689118
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
200	2.8	7.2	2.7	chr18	4510685	4511029	(75862256)	+	(GTG)n	Simple_repeat	1	370	(0)	1696090
100	42.8	1.4	1.4	chr18	5668228	5668943	(74704342)	+	(TG)n	Simple_repeat	1	726	(0)	1697545
2468	21.4	5.3	1.5	chr18	36941783	36942380	(43430905)	C	Tigger9b	DNA/TcMar-Tigger	(2)	622	1	1735414
205	18.6	0.3	0.0	chr18	46546273	46546655	(33826630)	+	(CATTC)n	Satellite	1	384	(0)	1748842
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
634	20.6	10.9	4.8	chr18	63979478	63979666	(16393619)	+	MER20	DNA/hAT-Charlie	18	219	(0)	1775857
1714	26.6	9.7	9.3	chr18	74617198	74618378	(5754907)	C	L1MC4	LINE/L1	(138)	7904	6719	1790144
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
566	29.2	5.8	3.0	chr19	10505864	10506131	(48111485)	+	L1ME4b	LINE/L1	332	607	(285)	1819927
74	38.8	1.1	2.8	chr19	14595567	14596030	(44021586)	+	(TGA)n	Simple_repeat	1	469	(0)	1829894
13	23.1	0.0	0.0	chr19	33249635	33249670	(25367946)	+	G-rich	Low_complexity	1	36	(0)	1856478
573	17.1	4.2	0.7	chr19	33249725	33250982	(25366634)	+	(AC)n	Simple_repeat	1	1311	(0)	1856479
375	19.9	6.1	2.7	chr19	41918206	41919154	(16698462)	+	(AC)n	Simple_repeat	1	984	(0)	1874171
807	23.4	0.9	5.9	chr19	48513223	48513444	(10104172)	C	MIR	SINE/MIR	(13)	249	39	1888913
1885	14.3	2.4	0.9	chr19	50135965	50136288	(8481328)	+	L1PB1	LINE/L1	5822	6150	(1)	1892741
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
684	19.9	1.8	4.0	chr19	56350283	56350455	(2267161)	+	MER83B-int	LTR/ERV1	4161	4329	(551)	1905660
400	22.2	4.6	0.7	chr2	1679074	1680180	(240513349)	+	(GT)n	Simple_repeat	1	1158	(0)	1912404
565	23.3	0.2	0.2	chr2	5022390	5023594	(237169935)	+	(CTACTA)n	Simple_repeat	1	1208	(0)	1916517
168	20.6	6.1	2.1	chr2	10433170	10433708	(231759821)	+	(GT)n	Simple_repeat	1	572	(0)	1924759
33	0.0	0.0	0.0	chr2	10433716	10433743	(231759786)	+	(TG)n	Simple_repeat	1	28	(0)	1924760
168	25.4	0.2	0.7	chr2	26526117	26526476	(215667053)	+	(ATGG)n	Simple_repeat	4	361	(0)	1950088
27	9.8	0.0	0.0	chr2	26526490	26526533	(215666996)	+	(GATG)n	Simple_repeat	1	44	(0)	1950089
267	35.4	3.0	7.7	chr2	26526642	26526849	(215666680)	C	L3	LINE/CR1	(519)	3580	3383	1950083
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
1054	18.4	0.5	5.6	chr2	44715671	44715901	(197477628)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1979647
10744	23.9	3.2	1.7	chr2	53422500	53423930	(188769599)	C	L1PA15	LINE/L1	(4746)	3409	1982	1992553
13011	19.0	2.2	5.4	chr2	63423847	63426057	(178767472)	+	L1PA16	LINE/L1	3	2145	(4358)	2007858
13462	17.3	3.1	2.7	chr2	75240774	75243077	(166950452)	+	L1P4a	LINE/L1	5	2310	(4193)	2026682
12807	23.8	4.2	1.8	chr2	77975943	77978175	(164215354)	+	L1PA15	LINE/L1	829	3114	(5041)	2030337
1818	18.5	0.0	2.2	chr2	77978176	77978494	(164215035)	C	AluJb	SINE/Alu	(0)	312	1	2030338
29	5.4	0.0	8.7	chr2	89787191	89787259	(152406270)	+	(GATTCCATTC)n	Simple_repeat	1	69	(0)	2047588
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
1228	16.9	1.1	0.3	chr2	92086431	92138145	(150055384)	+	ALR/Alpha	Satellite/centr	1	52133	(0)	2049307
27	16.0	0.0	6.8	chr2	100263118	100263190	(141930339)	+	(CCTT)n	Simple_repeat	1	73	(0)	2057636
1799	25.2	5.0	3.0	chr2	120650125	120650852	(121542677)	C	L1MEg	LINE/L1	(4677)	2873	2131	2087335
17639	16.9	1.4	2.5	chr2	122300532	122302497	(119891032)	+	L1PA15	LINE/L1	2400	4361	(3780)	2090205
666	27.0	11.9	4.0	chr2	126878828	126879105	(115314424)	+	MLT1I	LTR/ERVL-MaLR	93	395	(16)	2096553
1127	11.6	0.3	0.0	chr2	132286523	132287784	(109905745)	C	ACRO1	Satellite/acro	(55)	1265	1	2104358
278	25.0	2.1	4.2	chr2	140863798	140863893	(101329636)	+	L2a	LINE/L2	3246	3339	(87)	2116695
356	37.4	3.8	1.6	chr2	140863992	140864173	(101329356)	+	MIRb	SINE/MIR	11	196	(72)	2116696
359	27.9	8.1	3.3	chr2	158516069	158516165	(83677364)	+	MER103C	DNA/hAT-Charlie	70	171	(126)	2140230
604	26.4	1.2	0.0	chr2	158516166	158516328	(83677201)	C	MER5A1	DNA/hAT-Charlie	(0)	166	2	2140231
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
328	24.2	0.0	0.0	chr2	161279238	161279303	(80914226)	C	MER47C	DNA/TcMar-Tigger	(31)	66	1	2144205
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
12046	18.7	3.1	2.4	chr2	228398170	228402205	(13791324)	C	L1PA16	LINE/L1	(2307)	4176	116	2242008
520	19.8	3.1	2.0	chr2	240147000	240147415	(2046114)	+	(TG)n	Simple_repeat	1	438	(890)	2259744
14	7.5	3.3	3.2	chr2	240147416	240147445	(2046084)	+	(GGGTG)n	Simple_repeat	1	31	(0)	2259745
520	19.8	3.1	2.0	chr2	240147446	240148287	(2045242)	+	(TG)n	Simple_repeat	439	1328	(0)	2259744
447	27.7	14.4	5.1	chr2	240148295	240148727	(2044802)	C	LTR16E2	LTR/ERVL	(52)	486	7	2259746
1628	25.4	6.5	5.5	chr2	240220699	240221870	(1971659)	C	L1ME2z	LINE/L1	(1667)	4479	3631	2259826
38	0.0	0.0	0.0	chr2	240221871	240221905	(1971624)	+	(GTTAGG)n	Simple_repeat	1	35	(0)	2259827
1530	26.5	6.6	3.5	chr2	240221906	240222446	(1971083)	C	L1ME2z	LINE/L1	(2516)	3630	3012	2259826
514	22.9	0.0	1.5	chr2	240308669	240309861	(1883668)	+	(TG)n	Simple_repeat	1	1193	(0)	2259903
203	32.8	0.8	2.3	chr2	240961321	240962103	(1231426)	+	(CA)n	Simple_repeat	1	789	(0)	2260545
11301	0.4	16.2	0.0	chr2	242181833	242183303	(10226)	+	TAR1	Satellite/telo	314	2069	(42)	2262199
143	9.2	0.4	1.3	chr2	242183304	242183529	(10000)	+	(AGGGTT)n	Simple_repeat	1	227	(0)	2262200
1966	23.1	0.2	0.1	chr20	60221	63215	(64380952)	+	(ATTCC)n	Simple_repeat	2	3000	(0)	2262201
20524	17.1	3.8	3.1	chr20	6155972	6158644	(58285523)	C	L1PA16	LINE/L1	(3784)	2699	6	2273973
483	21.3	9.1	1.3	chr20	29095352	29095503	(35348664)	C	MER112	DNA/hAT-Charlie	(0)	261	97	2303878
5631	14.8	3.0	7.2	chr20	29880107	29881265	(34562902)	+	Tigger1	DNA/TcMar-Tigger	1310	2418	(0)	2304624
386	18.8	0.0	0.0	chr20	29881277	29881340	(34562827)	+	Tigger1	DNA/TcMar-Tigger	2355	2418	(0)	2304625
339	19.1	1.6	0.0	chr20	29881352	29881414	(34562753)	+	Tigger1	DNA/TcMar-Tigger	2355	2418	(0)	2304625
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
641	24.0	5.2	0.5	chr20	42239185	42239368	(22204799)	C	MIR	SINE/MIR	(0)	262	70	2328943
409	28.6	3.9	4.3	chr20	46789584	46789813	(17654354)	+	L2b	LINE/L2	2862	3103	(272)	2338464
172	15.9	5.6	3.0	chr20	58694893	58695338	(5748829)	+	(GT)n	Simple_repeat	1	471	(0)	2363351
203	34.0	2.8	2.8	chr20	58695339	58695444	(5748723)	C	MIRc	SINE/MIR	(16)	252	147	2363352
50	19.6	2.6	0.0	chr20	59767777	59767892	(4676275)	+	(TTTCC)n	Simple_repeat	1	119	(0)	2365011
99	2.0	1.0	0.9	chr20	62476871	62476974	(1967193)	+	(TTCT)n	Simple_repeat	1	105	(0)	2368610
1142	23.0	0.4	0.2	chr21	5327288	5328868	(41381115)	+	(TGGAA)n	Simple_repeat	1	1581	(0)	2371008
1142	23.0	0.4	0.2	chr21	5328933	5329957	(41380026)	+	(TGGAA)n	Simple_repeat	2	1031	(0)	2371010
10927	3.9	0.1	0.7	chr21	5329982	5331757	(41378226)	C	L1HS	LINE/L1	(3478)	2668	905	2371011
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
785	22.6	0.5	0.1	chr21	8455261	8456884	(38253099)	+	(TCTC)n	Simple_repeat	1	1629	(0)	2373669
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
348	29.9	3.7	2.4	chr21	8867678	8867968	(37842015)	C	L1ME3C	LINE/L1	(82)	6041	5747	2374082
2845	11.8	6.3	2.3	chr21	9124721	9124830	(37585153)	+	MER57-int	LTR/ERV1	7032	7142	(395)	2374258
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
381	17.5	1.6	0.0	chr21	9248617	9248679	(37461304)	+	AluYj4	SINE/Alu	224	287	(24)	2374342
312	21.5	5.8	0.0	chr21	9248928	9248992	(37460991)	+	AluJb	SINE/Alu	225	293	(19)	2374343
76	18.0	0.0	0.0	chr21	9248994	9249134	(37460849)	+	(AATGG)n	Simple_repeat	1	141	(0)	2374344
2558	6.4	0.9	0.0	chr21	9249136	9249479	(37460504)	+	L1P1	LINE/L1	3726	4072	(2074)	2374345
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
5217	12.6	4.0	1.4	chr21	10326480	10327674	(36382309)	C	L1PA16	LINE/L1	(0)	6166	4951	2375358
1963	8.7	7.3	2.5	chr21	10417524	10417809	(36292174)	C	AluSp	SINE/Alu	(12)	301	1	2375515
1191	18.2	0.0	1.9	chr21	10418369	10418380	(36291603)	C	AluJb	SINE/Alu	(16)	296	286	2375516
54	0.0	0.0	0.0	chr21	10418381	10418429	(36291554)	+	(TATT)n	Simple_repeat	1	49	(0)	2375517
398	8.6	0.2	0.0	chr21	10426491	10427038	(36282945)	+	(GTGGTG)n	Simple_repeat	1	549	(0)	2375540
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
16732	16.8	2.9	0.8	chr21	18835180	18840619	(27869364)	C	L1PA16	LINE/L1	(45)	6458	906	2383546
499	17.2	6.8	0.2	chr21	45155480	45156681	(1553302)	+	(ATCC)n	Simple_repeat	1	1284	(0)	2422592
3076	15.8	1.1	0.9	chr22	10721335	10730387	(40088081)	+	(TCCATTCCAT)n	Simple_repeat	1	9151	(0)	2424547
487	26.0	6.1	1.9	chr22	11309822	11309978	(39508490)	C	MIRb	SINE/MIR	(72)	196	33	2425024
1062	7.7	0.0	0.0	chr22	11310020	11310186	(39508282)	C	BSR/Beta	Satellite	(0)	167	1	2425025
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
7854	3.2	0.0	0.1	chr22	12611428	12613138	(38205330)	C	L1PA3	LINE/L1	(0)	6155	4446	2426032
310	15.2	0.0	1.7	chr22	12613152	12613211	(38205257)	C	L1MB3	LINE/L1	(32)	6151	6093	2426033
2023	16.4	4.8	5.4	chr22	12613207	12613830	(38204638)	C	L1M4	LINE/L1	(619)	5561	4945	2426034
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
166	30.7	2.0	1.9	chr22	23954244	23954899	(26863569)	+	(CA)n	Simple_repeat	1	669	(0)	2439273
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
301	19.9	0.2	0.2	chr22	39220329	39220901	(11597567)	+	(GGAT)n	Simple_repeat	1	574	(0)	2471148
405	13.0	7.8	3.1	chr22	49972792	49973865	(844603)	+	(GT)n	Simple_repeat	1	1123	(0)	2490010
236	7.6	8.0	3.6	chr22	49975367	49975881	(842587)	+	(GT)n	Simple_repeat	1	537	(0)	2490011
13115	16.2	4.4	4.0	chr3	26117278	26119182	(172176377)	+	L1PA16	LINE/L1	8	1952	(4551)	2534309
193	18.3	0.3	0.0	chr3	38084271	38084619	(160210940)	+	(TAG)n	Simple_repeat	1	350	(0)	2552504
13286	18.1	3.3	1.3	chr3	84544562	84549152	(113746407)	C	L1PA16	LINE/L1	(1786)	4697	2	2625871
14111	23.4	4.4	1.1	chr3	99170775	99174248	(99121311)	+	L1PREC2	LINE/L1	18	3863	(4292)	2639931
13911	20.9	3.0	1.4	chr3	104100710	104104158	(94191401)	C	L1PREC2	LINE/L1	(3446)	4695	426	2646640
4645	21.1	0.7	0.9	chr3	112436633	112438070	(85857489)	+	L1PA16	LINE/L1	2	1580	(5054)	2657829
313	31.5	8.1	2.7	chr3	140898100	140898285	(57397274)	C	Charlie8	DNA/hAT-Charlie	(2231)	197	1	2701469
354	26.1	6.7	0.9	chr3	140898328	140898439	(57397120)	+	MER102c	DNA/hAT-Charlie	186	304	(27)	2701470
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
268	17.0	7.7	1.8	chr3	196164562	196165339	(2130220)	+	(GT)n	Simple_repeat	1	838	(0)	2784386
250	22.0	3.7	3.0	chr3	196165340	196165351	(2130208)	+	(GTGTGTT)n	Simple_repeat	1	819	(0)	2784387
29	5.6	8.9	0.0	chr3	196165370	196165425	(2130134)	+	(TG)n	Simple_repeat	1	61	(0)	2784388
32	3.9	7.3	1.7	chr3	196165472	196165526	(2130033)	+	(GT)n	Simple_repeat	1	59	(0)	2784389
205	0.5	1.0	1.0	chr4	10001	10197	(190204358)	+	(ACCCTA)n	Simple_repeat	1	199	(0)	2788519
4151	15.9	5.9	18.2	chr4	10199	12822	(190201733)	C	TAR1	Satellite/telo	(238)	2302	1	2788520
331	20.6	2.7	3.2	chr4	6725481	6726368	(183488187)	+	(CA)n	Simple_repeat	1	912	(0)	2798948
460	22.3	0.3	0.6	chr4	7724079	7725055	(182489500)	+	(TGG)n	Simple_repeat	1	980	(0)	2800596
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
1130	13.8	0.3	0.1	chr4	49514156	49515857	(140698698)	+	ACRO1	Satellite/acro	1	1705	(0)	2865184
406	18.9	2.2	0.5	chr4	49573746	49573848	(140640707)	+	MSTA	LTR/ERVL-MaLR	4	113	(262)	2865274
271	21.9	1.9	0.4	chr4	49573937	49574021	(140640534)	+	THE1D-int	LTR/ERVL-MaLR	959	1064	(587)	2865275
839	22.6	15.8	2.1	chr4	49573984	49574223	(140640332)	C	THE1D-int	LTR/ERVL-MaLR	(398)	1233	955	2865276
867	26.6	5.5	4.6	chr4	49574228	49574534	(140640021)	+	MSTA	LTR/ERVL-MaLR	76	385	(43)	2865274
10281	20.0	2.4	1.9	chr4	85228140	85229593	(104984962)	C	L1PA16	LINE/L1	(5046)	1457	11	2912242
12535	18.2	4.1	2.5	chr4	107094049	107095591	(83118964)	C	L1P4a	LINE/L1	(4876)	1627	1	2941652
7176	20.1	5.8	2.6	chr4	118075966	118078332	(72136223)	C	L1PA15	LINE/L1	(4181)	2604	102	2956404
126	6.4	1.0	3.1	chr4	124470395	124470587	(65743968)	+	(CTTC)n	Simple_repeat	1	195	(0)	2965315
21	28.7	4.8	3.9	chr4	124470588	124470612	(65743943)	+	(CTCT)n	Simple_repeat	1	25	(0)	2965316
56	2.6	4.9	2.3	chr4	124470613	124470694	(65743861)	+	(TCTT)n	Simple_repeat	1	86	(0)	2965317
5136	19.5	7.0	1.4	chr4	128190804	128192136	(62022419)	C	L1MA4	LINE/L1	(4908)	2657	1251	2970340
2476	13.1	3.8	0.7	chr4	162204058	162204710	(28009845)	+	L1M3	LINE/L1	5077	5757	(411)	3016402
6775	24.8	2.9	3.5	chr4	166476699	166478610	(23735945)	+	L1MB7	LINE/L1	17	1917	(5600)	3022427
5093	19.0	4.6	2.0	chr4	172240529	172241240	(17973315)	C	L1P4a	LINE/L1	(4702)	1801	1090	3030010
543	5.4	1.2	0.9	chr4	190122449	190123118	(91437)	+	(AGGGTT)n	Simple_repeat	1	678	(0)	3054644
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
2125	0.2	0.0	0.3	chr5	10001	11835	(181526424)	+	(TAACCC)n	Simple_repeat	1	1835	(0)	3054965
616	18.1	7.6	3.3	chr5	3322298	3324431	(178213828)	+	(GT)n	Simple_repeat	1	2297	(0)	3058237
266	28.6	5.2	0.0	chr5	52007368	52007458	(129530801)	C	AmnSINE1	SINE/5S-Deu-L2	(368)	207	112	3118457
4629	19.1	3.2	8.0	chr5	64460987	64462396	(117075863)	+	L1M2	LINE/L1	3306	4621	(2587)	3136449
663	24.8	0.0	0.0	chr5	64462397	64462521	(117075738)	+	AluJo	SINE/Alu	161	285	(27)	3136451
4629	19.1	3.2	8.0	chr5	64462522	64463443	(117074816)	+	L1M2	LINE/L1	4622	5484	(1724)	3136449
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
217	34.7	10.2	4.6	chr5	144141997	144142126	(37396133)	+	L2b	LINE/L2	3238	3375	(0)	3248829
267	26.9	9.3	1.4	chr5	159133027	159133199	(22405060)	C	MIR3	SINE/MIR	(6)	202	11	3275605
4089	13.8	2.5	1.5	chr5	159133382	159134096	(22404163)	C	L1PB4	LINE/L1	(6)	6150	5429	3275606
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
14	12.6	8.3	0.0	chr5	179223072	179223107	(2315152)	+	(TTCA)n	Simple_repeat	1	39	(0)	3310513
923	16.6	1.7	1.2	chr5	180697756	180697926	(840333)	+	L1MB3	LINE/L1	5020	5191	(949)	3313108
3243	22.6	6.4	3.1	chr5	180697928	180698345	(839914)	C	MSTB-int	LTR/ERVL-MaLR	(824)	827	367	3313112
38	2.4	0.0	2.3	chr6	1114750	1114793	(169691186)	+	(CCTAAC)n	Simple_repeat	1	44	(0)	3315667
974	17.0	5.0	2.9	chr6	34070977	34073549	(136732430)	+	(CA)n	Simple_repeat	1	2702	(0)	3367583
1174	26.5	10.0	3.5	chr6	38671537	38672021	(132133958)	+	Tigger13a	DNA/TcMar-Tigger	1	520	(251)	3376761
538	21.3	11.2	0.0	chr6	38672023	38672149	(132133830)	+	MER20B	DNA/hAT-Charlie	1	143	(640)	3376762
2786	15.6	12.7	1.6	chr6	38672201	38672797	(132133182)	+	L1MC3	LINE/L1	7107	7771	(14)	3376763
1494	6.7	1.0	1.5	chr6	52663490	52663687	(118142292)	C	MER107	DNA/hAT-Charlie	(1)	199	3	3398908
6947	4.2	2.2	0.1	chr6	68195701	68196736	(102609243)	+	L1PA5	LINE/L1	5097	6168	(0)	3416405
13983	16.9	5.7	1.0	chr6	68196782	68201870	(102604109)	+	L1PA16	LINE/L1	1945	7308	(26)	3416404
15874	21.0	3.3	4.9	chr6	68569271	68573805	(102232174)	C	L1PA17	LINE/L1	(1930)	4919	484	3416833
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
585	27.8	4.2	1.6	chr6	145302503	145302806	(25503173)	+	L1MEg	LINE/L1	1695	2006	(4078)	3522569
1134	26.5	3.8	1.6	chr6	145302941	145303327	(25502652)	C	L1ME3E	LINE/L1	(104)	6138	5743	3522570
58	29.8	0.6	0.0	chr6	150016429	150016599	(20789380)	+	(CA)n	Simple_repeat	1	172	(0)	3529519
909	13.3	0.0	0.0	chr6	150017173	150017300	(20788679)	C	AluSg	SINE/Alu	(149)	161	34	3529520
4726	15.7	2.3	0.3	chr6	150017301	150018221	(20787758)	C	L1P4	LINE/L1	(754)	5392	4453	3529521
31	13.9	0.0	0.0	chr6	160218913	160218977	(10587002)	+	(CAG)n	Simple_repeat	1	65	(0)	3545197
1017	21.5	7.3	3.1	chr6	167385173	167389329	(3416650)	+	(GT)n	Simple_repeat	1	4461	(0)	3554347
367	18.0	4.6	0.5	chr6	167651397	167652230	(3153749)	+	(GT)n	Simple_repeat	1	872	(0)	3554614
388	35.6	4.6	3.7	chr6	168614431	168615747	(2190232)	+	TAR1	Satellite/telo	1	1328	(552)	3555632
182	24.7	1.3	0.0	chr6	170452770	170453217	(352762)	+	(GT)n	Simple_repeat	1	454	(0)	3557445
227	0.4	5.0	0.0	chr7	10001	10241	(159335732)	+	(CTAACC)n	Simple_repeat	1	253	(0)	3557857
1863	14.6	5.8	0.3	chr7	1356511	1356791	(157989182)	C	AluSz	SINE/Alu	(13)	299	1	3559756
397	22.0	9.0	0.8	chr7	1356792	1356804	(157989169)	+	Charlie5	DNA/hAT-Charlie	2541	2553	(71)	3559755
356	27.6	4.3	5.0	chr7	1356811	1356951	(157989022)	+	L2b	LINE/L2	3205	3344	(31)	3559754
1333	24.5	7.4	4.2	chr7	1795986	1796390	(157549583)	+	LTR41B	LTR/ERVL	335	753	(5)	3560504
112	24.9	0.7	1.7	chr7	4083573	4083862	(155262111)	+	(CCTC)n	Simple_repeat	1	292	(0)	3564226
13413	20.3	3.1	4.0	chr7	9089525	9093794	(150252179)	+	L1PREC2	LINE/L1	6	5080	(3061)	3573303
23451	8.0	0.5	0.2	chr7	19045740	19051889	(140294084)	+	L1PA6	LINE/L1	174	6327	(0)	3586069
16	8.2	0.0	0.0	chr7	19051890	19051915	(140294058)	+	(ATAA)n	Simple_repeat	1	26	(0)	3586070
8797	12.0	1.8	1.8	chr7	19051916	19053707	(140292266)	+	L1PA15-16	LINE/L1	1446	3240	(3609)	3586071
314	28.6	0.9	7.1	chr7	43700268	43700380	(115645593)	+	L1MC5	LINE/L1	9199	9304	(0)	3623010
8173	21.9	7.6	4.0	chr7	51369127	51370432	(107975541)	+	L1P4a	LINE/L1	466	1817	(4872)	3633567
2401	10.8	0.3	0.0	chr7	51370433	51370737	(107975236)	+	AluSz	SINE/Alu	2	307	(5)	3633568
351	21.6	1.4	2.7	chr7	57487757	57487830	(101858143)	+	AluJb	SINE/Alu	208	280	(32)	3642532
384	15.6	3.0	0.0	chr7	57489851	57489914	(101856059)	+	AluJo	SINE/Alu	225	290	(22)	3642536
347	18.2	0.0	0.0	chr7	57495188	57495242	(101850731)	+	AluYj4	SINE/Alu	225	279	(32)	3642545
367	17.7	3.1	0.0	chr7	57495408	57495469	(101850504)	+	AluYj4	SINE/Alu	226	289	(22)	3642546
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
84	11.5	0.0	0.0	chr7	65489745	65489886	(93856087)	+	(CCATT)n	Simple_repeat	1	142	(0)	3647902
383	14.3	3.1	0.0	chr7	65489887	65489949	(93856024)	C	AluYj4	SINE/Alu	(22)	289	225	3647903
85	11.3	0.7	0.6	chr7	65489965	65490119	(93855854)	+	(TTCCA)n	Simple_repeat	1	156	(0)	3647904
318	22.3	3.4	9.0	chr7	70495526	70497356	(88848617)	+	(CGCACA)n	Simple_repeat	1	1893	(0)	3658384
2270	27.1	10.9	2.6	chr7	73963086	73964059	(85381914)	C	L1MEf	LINE/L1	(4473)	1942	878	3665875
3275	24.4	7.0	5.0	chr7	85748966	85750652	(73595321)	+	L1PA7	LINE/L1	644	2076	(5258)	3685163
7155	19.8	2.9	1.8	chr7	85750667	85753063	(73592910)	+	L1PA13	LINE/L1	1227	3650	(3116)	3685164
400	10.8	0.2	2.5	chr7	98810993	98811637	(60534336)	+	(TGG)n	Simple_repeat	1	646	(0)	3703453
16	7.6	7.1	0.0	chr7	104932814	104932841	(54413132)	+	(CA)n	Simple_repeat	1	30	(0)	3714849
88	28.3	0.0	0.0	chr7	104932974	104933148	(54412825)	+	(ACACAC)n	Simple_repeat	1	175	(0)	3714850
274	15.2	0.0	0.0	chr7	104933156	104933201	(54412772)	C	MER4-int	LTR/ERV1	(5442)	1156	1111	3714851
88	28.3	0.0	0.0	chr7	104933201	104933392	(54412581)	+	(ACACAC)n	Simple_repeat	6	197	(0)	3714852
632	27.7	11.4	3.4	chr7	128322295	128322679	(31023294)	+	Charlie22a	DNA/hAT-Charlie	13	432	(59)	3747007
328	16.4	7.8	3.8	chr7	150003183	150004275	(9341698)	+	(GT)n	Simple_repeat	1	1178	(0)	3781444
473	12.1	9.2	0.8	chr7	150359153	150360260	(8985713)	+	(CA)n	Simple_repeat	1	1210	(0)	3781942
1183	17.8	6.2	3.2	chr7	150360262	150360511	(8985462)	C	MER67C	LTR/ERV1	(220)	491	234	3781941
627	16.2	4.2	3.0	chr7	157481307	157482858	(1863115)	+	(GGTGTGT)n	Simple_repeat	1	1618	(0)	3792516
363	23.4	0.4	3.9	chr7	158262202	158263196	(1082777)	+	(AC)n	Simple_repeat	1	999	(0)	3793117
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
9545	15.1	1.7	1.6	chr8	62102546	62104129	(83034507)	+	L1PA16	LINE/L1	734	2319	(4184)	3881501
298	29.0	3.1	1.6	chr8	85659943	85660068	(59478568)	C	L1ME4b	LINE/L1	(0)	892	765	3914925
322	27.6	0.0	0.0	chr8	85660141	85660227	(59478409)	C	MLT1F1	LTR/ERVL-MaLR	(482)	87	1	3914926
4592	9.3	0.1	1.5	chr8	85660229	85660904	(59477732)	C	L1P1	LINE/L1	(2973)	3173	2507	3914927
9953	10.6	0.1	0.7	chr8	85742400	85743923	(59394713)	C	L1P1	LINE/L1	(2125)	4021	2507	3914963
2228	17.6	2.9	5.7	chr8	85769394	85769806	(59368830)	+	L1MA8	LINE/L1	5887	6286	(5)	3914995
5957	21.7	6.7	5.0	chr8	109952973	109955000	(35183636)	C	L1PA16	LINE/L1	(4494)	2195	4	3951526
1576	22.6	7.8	0.0	chr8	141540395	141540748	(3597888)	C	MLT1B	LTR/ERVL-MaLR	(4)	386	3	4003781
253	6.9	6.8	1.1	chr8	141540894	141541405	(3597231)	+	(CA)n	Simple_repeat	1	547	(0)	4003782
1028	6.7	4.1	3.4	chr8	142221654	142223680	(2914956)	+	(CACTCACT)n	Simple_repeat	1	2110	(0)	4004668
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
40	0.0	0.0	0.0	chr9	2824045	2824081	(135570636)	+	(TAGGGT)n	Simple_repeat	1	37	(0)	4012710
189	29.3	10.8	0.0	chr9	2824136	2824193	(135570524)	+	L2b	LINE/L2	3306	3370	(5)	4012711
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
253	26.1	0.0	0.0	chr9	70038639	70038703	(68356014)	+	MER102a	DNA/hAT-Charlie	90	154	(176)	4082516
77	8.8	0.0	0.0	chr9	76175202	76175310	(62219407)	+	(GAATG)n	Simple_repeat	1	109	(0)	4092041
20	6.9	0.0	0.0	chr9	76175311	76175341	(62219376)	+	(AGAAC)n	Simple_repeat	1	31	(0)	4092042
5347	13.0	0.8	0.0	chr9	87949762	87950555	(50444162)	C	L1PA16	LINE/L1	(3)	6163	5364	4110207
9670	17.2	4.9	1.6	chr9	87950551	87952312	(50442405)	C	L1P4d	LINE/L1	(4966)	1969	146	4110208
578	15.6	4.1	6.4	chr9	90841000	90842747	(47551970)	+	(TG)n	Simple_repeat	1	1820	(0)	4114364
15695	16.8	3.9	1.4	chr9	102626728	102631505	(35763212)	C	L1PA16	LINE/L1	(189)	6314	1399	4133298
30	0.0	0.0	0.0	chr9	102631506	102631533	(35763184)	+	(T)n	Simple_repeat	1	28	(0)	4133300
11922	17.1	1.4	1.5	chr9	102631534	102632421	(35762296)	C	L1PA16	LINE/L1	(5105)	1398	526	4133298
321	25.4	1.2	1.0	chr9	121895265	121896124	(16498593)	+	(GT)n	Simple_repeat	1	870	(0)	4167891
30	3.5	0.0	0.0	chr9	129576015	129576044	(8818673)	+	(AC)n	Simple_repeat	1	30	(0)	4183170
164	19.7	6.9	1.3	chr9	129576051	129576556	(8818161)	+	(ACTC)n	Simple_repeat	1	541	(0)	4183171
270	19.9	0.7	0.2	chr9	130958574	130959111	(7435606)	+	(CACCAC)n	Simple_repeat	1	542	(0)	4186091
208	29.9	6.1	1.8	chr9	133588717	133588825	(4805892)	C	MIR3	SINE/MIR	(55)	153	40	4190801
286	8.8	9.5	2.4	chr9	134182441	134183092	(4211625)	+	(TG)n	Simple_repeat	1	714	(0)	4191688
186	39.1	0.2	0.8	chr9	136630737	136631565	(1763152)	+	(ACAC)n	Simple_repeat	1	831	(0)	4194567
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
15185	19.1	1.7	1.1	chrX	57453360	57458342	(98582553)	+	L1PA16	LINE/L1	580	5563	(1110)	4449083
2260	10.8	0.7	2.2	chrX	70122067	70122380	(85918515)	+	AluSq2	SINE/Alu	2	310	(3)	4459147
48	3.5	3.4	0.0	chrX	70122389	70122447	(85918448)	+	(CTCTCC)n	Simple_repeat	1	61	(0)	4459148
10304	4.1	0.7	8.0	chrX	70122448	70123902	(85916993)	+	SVA_B	Retroposon/SVA	35	1383	(0)	4459149
12354	25.1	2.4	2.7	chrX	77276450	77278663	(78762232)	+	L1PA16	LINE/L1	2312	4487	(3654)	4468156
10238	8.0	0.1	0.1	chrX	102189512	102191059	(53849836)	C	L1PA6	LINE/L1	(2534)	3612	2080	4496955
19096	16.5	3.0	2.9	chrX	103952927	103957838	(52083057)	+	L1PA13	LINE/L1	7	5113	(2468)	4499376
34	2.8	0.0	0.0	chrX	106862767	106862802	(49178093)	+	(T)n	Simple_repeat	1	36	(0)	4503270
6618	24.5	6.7	8.9	chrX	106862803	106864500	(49176395)	C	L1PA15	LINE/L1	(5022)	1667	4	4503267
1674	24.4	5.5	1.7	chrX	117610825	117611291	(38429604)	+	MLT1E2	LTR/ERVL-MaLR	141	626	(1)	4517937
688	26.2	4.5	0.6	chrX	140723231	140725499	(15315396)	+	(AC)n	Simple_repeat	1	2370	(0)	4552693
297	24.6	0.0	0.0	chrY	10627178	10627242	(46600173)	C	AluJo	SINE/Alu	(20)	292	228	4587825
890	21.9	0.8	0.9	chrY	10627274	10627798	(46599617)	+	(CCATT)n	Simple_repeat	3	528	(0)	4587826
337	23.6	0.0	0.0	chrY	10632251	10632322	(46595093)	C	AluJo	SINE/Alu	(16)	296	225	4587848
282	23.3	1.1	0.7	chrY	10632322	10632659	(46594756)	+	(CATTC)n	Satellite	1	340	(0)	4587849
308	18.4	0.0	0.0	chrY	10652497	10652545	(46574870)	C	AluYa8	SINE/Alu	(39)	271	223	4587883
149	10.5	1.4	1.4	chrY	10664579	10664856	(46562559)	+	(CCATT)n	Simple_repeat	1	282	(0)	4587925
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
333	25.6	2.5	0.0	chrY	10677927	10678004	(46549411)	C	AluSz6	SINE/Alu	(8)	304	225	4587975
133	21.1	0.0	0.0	chrY	10678018	10678288	(46549127)	+	(ATTCC)n	Simple_repeat	1	271	(0)	4587976
328	20.6	3.1	0.0	chrY	10686758	10686820	(46540595)	C	FRAM	SINE/Alu	(13)	153	89	4587996
75	7.6	0.0	0.0	chrY	10687986	10688083	(46539332)	+	(ATTCC)n	Simple_repeat	1	98	(0)	4588000
322	25.1	3.0	0.5	chrY	10693618	10693705	(46533710)	C	AluY	SINE/Alu	(7)	295	207	4588025
222	19.6	0.7	0.7	chrY	10693706	10694157	(46533258)	+	(TTCCA)n	Simple_repeat	1	455	(0)	4588026
304	25.0	0.0	0.0	chrY	10925199	10925266	(46302149)	C	FRAM	SINE/Alu	(10)	156	89	4588454
6112	24.5	0.6	0.4	chrY	10925266	10926566	(46300849)	+	(TTCCA)n	Simple_repeat	4	1309	(0)	4588455
358	14.3	0.0	0.0	chrY	10932083	10932131	(46295284)	C	AluYi6	SINE/Alu	(39)	272	224	4588464
6112	24.5	0.6	0.4	chrY	10932144	10932420	(46294995)	+	(TTCCA)n	Simple_repeat	3	280	(0)	4588465
224	21.3	11.3	0.0	chrY	10933063	10933109	(46294306)	C	FRAM	SINE/Alu	(36)	140	88	4588468
6112	24.5	0.6	0.4	chrY	10933113	10933902	(46293513)	+	(TTCCA)n	Simple_repeat	3	794	(0)	4588469
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
4917	25.0	0.5	0.3	chrY	10945942	10948880	(46278535)	+	(TCCAC)n	Simple_repeat	1	2949	(0)	4588499
314	22.4	2.9	0.0	chrY	10950282	10950348	(46277067)	C	AluYj4	SINE/Alu	(18)	293	225	4588504
235	26.3	10.9	0.0	chrY	10950303	10950359	(46277056)	+	SVA_A	Retroposon/SVA	332	395	(992)	4588505
4917	25.0	0.5	0.3	chrY	10950360	10951162	(46276253)	+	(TCCAC)n	Simple_repeat	1	804	(0)	4588506
4917	25.0	0.5	0.3	chrY	10953151	10955597	(46271818)	+	(TCCAC)n	Simple_repeat	5	2454	(0)	4588512
301	17.0	0.0	0.0	chrY	10958417	10958463	(46268952)	C	AluYj4	SINE/Alu	(41)	270	224	4588520
226	15.8	0.0	5.0	chrY	10958430	10958469	(46268946)	+	SVA_F	Retroposon/SVA	332	369	(1006)	4588521
1259	23.0	0.4	0.6	chrY	10958474	10959925	(46267490)	+	(CATTC)n	Satellite	1	1451	(0)	4588522
258	28.4	0.0	0.0	chrY	10974044	10974110	(46253305)	C	AluJb	SINE/Alu	(11)	291	225	4588566
306	20.3	3.0	0.0	chrY	10986737	10986800	(46240615)	C	AluYj4	SINE/Alu	(22)	289	224	4588603
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
296	27.5	0.0	0.0	chrY	11005579	11005647	(46221768)	C	AluYa8	SINE/Alu	(19)	291	223	4588665
315	20.6	3.1	0.0	chrY	11012144	11012206	(46215209)	C	AluYj4	SINE/Alu	(23)	288	224	4588685
248	15.5	0.0	4.7	chrY	11012166	11012212	(46215203)	+	SVA_F	Retroposon/SVA	330	380	(1004)	4588686
55	32.9	1.0	0.0	chrY	11012221	11012247	(46215168)	+	(TTCCA)n	Simple_repeat	1	28	(0)	4588687
85	6.9	0.0	0.0	chrY	11012248	11012354	(46215061)	+	(CATTC)n	Simple_repeat	1	107	(0)	4588688
55	32.9	1.0	0.0	chrY	11012355	11012527	(46214888)	+	(TTCCA)n	Simple_repeat	4	177	(0)	4588689
294	21.8	0.0	0.0	chrY	11024506	11024560	(46202855)	C	AluYj4	SINE/Alu	(33)	278	224	4588731
320	23.8	1.6	0.5	chrY	11031071	11031156	(46196259)	C	AluY	SINE/Alu	(9)	293	208	4588745
321	23.5	2.9	0.0	chrY	11039221	11039288	(46188127)	C	AluSz6	SINE/Alu	(18)	294	225	4588770
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
338	21.0	6.9	0.0	chrY	11281975	11282055	(45945360)	C	MER21C	LTR/ERVL	(822)	116	30	4589057
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157
10957	28.1	0.5	0.1	chrY	26643208	26653351	(30574064)	+	(AATGG)n	Simple_repeat	1	10181	(0)	4607159
10957	28.2	0.5	0.1	chrY	26653859	26659290	(30568125)	+	(AATGG)n	Simple_repeat	5	5454	(0)	4607165