528	6.5	1.3	4.5	chr1	180089	180998	(248775424)	+	(ACCCTA)n	Simple_repeat	1	922	(0)	268
3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
14	17.5	0.0	2.9	chr1	1232284	1232317	(247724105)	+	(GCG)n	Simple_repeat	1	34	(0)	1498
13	14.9	5.1	2.4	chr1	1232410	1232448	(247723974)	+	(CCGCGC)n	Simple_repeat	1	41	(0)	1499
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
12	17.6	0.0	0.0	chr1	1420642	1420668	(247535754)	+	(CCCCG)n	Simple_repeat	1	27	(0)	1716
14	20.1	0.0	0.0	chr1	4654351	4654384	(244302038)	+	G-rich	Low_complexity	1	34	(0)	5644
18	14.4	7.5	0.0	chr1	6041776	6041815	(242914607)	+	(CT)n	Simple_repeat	1	43	(0)	7605
317	29.9	5.8	8.9	chr1	6209589	6209768	(242746654)	C	L2b	LINE/L2	(84)	3291	3118	7838
25	14.9	1.5	5.9	chr1	6424672	6424738	(242531684)	+	G-rich	Low_complexity	1	68	(0)	8207
15	15.2	0.0	5.0	chr1	6424777	6424816	(242531606)	+	(GAGCG)n	Simple_repeat	1	40	(0)	8208
15	14.4	7.5	2.3	chr1	6454982	6455021	(242501401)	+	(GC)n	Simple_repeat	1	43	(0)	8256
15	13.8	0.0	2.9	chr1	6455463	6455496	(242500926)	+	(CGGCAG)n	Simple_repeat	1	34	(0)	8257
563	22.3	10.7	13.0	chr1	9141941	9142295	(239814127)	+	Charlie4a	DNA/hAT-Charlie	152	497	(11)	13024
112	18.9	0.4	1.7	chr1	9142540	9142559	(239813863)	+	(TTCC)n	Simple_repeat	1	20	(0)	13025
2089	10.3	2.6	3.2	chr1	9142560	9142871	(239813551)	C	AluSz	SINE/Alu	(2)	310	1	13026
2448	10.3	0.3	0.0	chr1	9411350	9411661	(239544761)	C	AluSp	SINE/Alu	(0)	313	1	13530
185	17.5	2.4	0.0	chr1	10430229	10430268	(238526154)	C	L2a	LINE/L2	(38)	3388	3348	15779
32	11.8	2.9	2.9	chr1	16499333	16499400	(232457022)	+	(GGCCGG)n	Simple_repeat	1	70	(0)	27637
449	20.6	3.7	0.8	chr1	17755021	17755152	(231201270)	C	L1ME2	LINE/L1	(238)	5926	5791	30165
929	25.8	4.9	6.2	chr1	17755153	17755695	(231200727)	+	LTR41	LTR/ERVL	3	591	(177)	30168
18	4.7	0.0	0.0	chr1	18820802	18820823	(230135599)	+	(GT)n	Simple_repeat	1	22	(0)	32494
2233	9.9	0.0	0.0	chr1	22024622	22024905	(226931517)	C	AluSx1	SINE/Alu	(27)	285	2	39247
1961	14.0	0.0	0.0	chr1	22888874	22889159	(226067263)	+	AluJb	SINE/Alu	2	287	(25)	41180
663	29.2	15.4	1.9	chr1	22889472	22889791	(226066631)	C	L2c	LINE/L2	(1)	3386	3010	41181
302	16.3	11.3	2.8	chr1	25239653	25239750	(223716672)	C	FRAM	SINE/Alu	(10)	156	79	46682
384	20.8	12.2	5.6	chr1	27350194	27350300	(221606122)	+	MIRb	SINE/MIR	119	233	(35)	51563
1767	15.8	0.3	0.0	chr1	28550729	28551013	(220405409)	+	AluJo	SINE/Alu	1	286	(26)	54496
17	0.0	0.0	3.9	chr1	28551028	28551053	(220405369)	+	(AATA)n	Simple_repeat	1	26	(0)	54497
2336	14.2	2.0	4.1	chr1	28551054	28551204	(220405218)	+	LTR35A	LTR/ERV1	132	270	(277)	54498
2068	8.7	0.7	3.2	chr1	28551205	28551514	(220404908)	+	AluSx1	SINE/Alu	1	302	(10)	54499
27	0.0	0.0	0.0	chr1	29123773	29123798	(219832624)	+	(GAGG)n	Simple_repeat	1	26	(0)	55965
21	17.1	0.0	10.0	chr1	29123930	29124009	(219832413)	+	(GCCCC)n	Simple_repeat	1	80	(0)	55966
12	20.4	2.4	2.4	chr1	29124363	29124403	(219832019)	+	(CGCCAGA)n	Simple_repeat	1	42	(0)	55967
540	31.9	6.0	1.3	chr1	29167770	29168007	(219788415)	C	MIR	SINE/MIR	(8)	254	5	56065
1878	13.2	0.3	6.6	chr1	29168013	29168330	(219788092)	C	AluSx3	SINE/Alu	(13)	298	1	56066
18	23.9	1.6	3.1	chr1	29260088	29260150	(219696272)	+	G-rich	Low_complexity	1	64	(0)	56269
16725	17.9	2.5	1.9	chr1	29377930	29380337	(219576085)	C	L1MA4	LINE/L1	(3898)	3667	1239	56484
1703	13.8	1.8	5.9	chr1	31593591	31593880	(217362542)	C	AluJb	SINE/Alu	(8)	304	27	60971
208	23.6	7.7	11.1	chr1	31593881	31593908	(217362514)	+	L2b	LINE/L2	3148	3169	(206)	60970
205	31.2	5.3	1.6	chr1	31594294	31594420	(217362002)	C	MIRb	SINE/MIR	(135)	133	2	60964
29	7.9	0.0	0.0	chr1	31938062	31938102	(217018320)	+	(CGG)n	Simple_repeat	1	41	(0)	61649
13	20.9	4.3	2.1	chr1	31938121	31938144	(217018278)	+	(CGGCG)n	Simple_repeat	1	46	(0)	61650
16	0.0	0.0	0.0	chr1	31938145	31938164	(217018258)	+	(CGG)n	Simple_repeat	1	20	(0)	61651
35	29.8	3.9	3.8	chr1	31938185	31938388	(217018034)	+	(GCC)n	Simple_repeat	1	212	(0)	61652
15	14.7	0.0	0.0	chr1	31938446	31938475	(217017947)	+	(GCTG)n	Simple_repeat	1	30	(0)	61653
19	15.5	3.7	3.6	chr1	32336172	32336255	(216620167)	+	(CTCCG)n	Simple_repeat	1	84	(0)	62647
272	21.4	20.3	2.0	chr1	32400677	32400776	(216555646)	+	MIRb	SINE/MIR	21	143	(125)	62791
255	23.9	0.0	0.0	chr1	32401241	32401286	(216555136)	C	MER45A	DNA/hAT-Tip100	(1)	177	132	62792
1243	14.0	0.0	0.0	chr1	32401384	32401562	(216554860)	+	AluSx3	SINE/Alu	133	311	(0)	62793
6250	13.3	3.1	2.2	chr1	32448198	32449195	(216507227)	+	LTR13	LTR/ERVK	1	1007	(0)	62858
12	11.1	0.0	8.6	chr1	32973105	32973139	(215983283)	+	(GCCCCC)n	Simple_repeat	1	35	(0)	64134
12	16.5	0.0	0.0	chr1	32973206	32973232	(215983190)	+	G-rich	Low_complexity	1	27	(0)	64135
22	12.8	0.0	0.0	chr1	32973436	32973469	(215982953)	+	(T)n	Simple_repeat	1	34	(0)	64136
6293	8.6	2.1	15.4	chr1	32973471	32975836	(215980586)	C	SVA_E	Retroposon/SVA	(0)	1382	50	64137
259	28.2	8.6	10.1	chr1	33006989	33007079	(215949343)	C	L4_C_Mam	LINE/RTE-X	(252)	4886	4791	64224
481	26.4	4.0	3.4	chr1	33298425	33298573	(215657849)	C	MIRb	SINE/MIR	(77)	191	42	64876
19	19.2	3.0	10.9	chr1	33307212	33307344	(215649078)	+	(GCGCCAC)n	Simple_repeat	1	137	(0)	64891
139	22.7	0.9	8.5	chr1	33307505	33308064	(215648358)	+	(CCTCA)n	Simple_repeat	1	565	(0)	64892
295	25.0	13.1	2.3	chr1	33632976	33633151	(215323271)	+	L1ME4a	LINE/L1	5925	6122	(2)	65420
30	30.8	2.3	1.5	chr1	34786462	34786592	(214169830)	+	(GGCTGG)n	Simple_repeat	1	134	(0)	67413
344	26.7	3.2	0.0	chr1	34859978	34860067	(214096355)	C	L2c	LINE/L2	(5)	3382	3290	67556
556	22.9	8.1	2.3	chr1	34860116	34860289	(214096133)	+	MIRb	SINE/MIR	84	268	(0)	67557
1961	4.5	11.2	0.0	chr1	37690016	37690284	(211266138)	C	AluSx1	SINE/Alu	(9)	303	1	73248
247	29.2	0.0	0.0	chr1	38608606	38608670	(210347752)	+	MER20	DNA/hAT-Charlie	134	198	(21)	75007
1766	15.9	8.7	2.1	chr1	39609192	39609577	(209346845)	+	MLT2C2	LTR/ERVL	1	414	(50)	77050
597	31.6	9.3	2.5	chr1	39609599	39610208	(209346214)	C	L2a	LINE/L2	(425)	2994	2339	77049
2345	9.0	0.0	1.7	chr1	39674957	39675256	(209281166)	+	AluSg	SINE/Alu	1	295	(15)	77181
200	30.8	7.7	3.2	chr1	39675484	39675607	(209280815)	+	L2b	LINE/L2	3029	3158	(217)	77182
1855	11.3	9.8	0.0	chr1	40379556	40379830	(208576592)	C	AluSx1	SINE/Alu	(6)	306	2	78705
328	33.2	3.2	3.2	chr1	40650386	40650575	(208305847)	+	L2b	LINE/L2	2830	3019	(400)	79240
292	19.7	3.5	1.8	chr1	40666043	40666140	(208290282)	C	MIR1_Amn	SINE/MIR	(16)	192	91	79270
16	16.3	0.0	6.4	chr1	41361380	41361428	(207594994)	+	(CCCCGC)n	Simple_repeat	1	45	(0)	80668
14	24.8	5.3	0.0	chr1	41361441	41361497	(207594925)	+	(AGCCGG)n	Simple_repeat	1	60	(0)	80669
1231	30.6	11.6	7.8	chr1	41444180	41445119	(207511303)	C	MamGypLTR3a	LTR/Gypsy	(0)	981	1	80814
2497	8.7	0.0	0.3	chr1	43994429	43994740	(204961682)	C	AluYh3	SINE/Alu	(0)	311	1	85257
1179	24.6	16.1	11.3	chr1	44729061	44729330	(204227092)	+	L2a	LINE/L2	3015	3331	(95)	86580
2249	7.5	0.3	1.3	chr1	44729606	44729940	(204226482)	C	AluSg	SINE/Alu	(0)	310	1	86583
10290	14.7	1.4	1.4	chr1	45257534	45258932	(203697490)	+	MSTA-int	LTR/ERVL-MaLR	1	1412	(219)	87614
222	32.0	17.8	0.6	chr1	46300523	46300698	(202655724)	+	L2	LINE/L2	2695	2907	(512)	89752
2985	8.9	9.6	1.9	chr1	46393504	46393974	(202562448)	C	LTR10F	LTR/ERV1	(0)	511	1	89967
224	30.5	13.1	0.0	chr1	46411371	46411498	(202544924)	+	MIR3	SINE/MIR	36	186	(82)	89997
507	28.1	5.6	4.6	chr1	46442495	46442688	(202513734)	+	MIRb	SINE/MIR	46	241	(27)	90054
14	16.4	2.9	0.0	chr1	47225567	47225600	(201730822)	+	G-rich	Low_complexity	1	35	(0)	91120
24	19.6	8.6	0.0	chr1	47417014	47417094	(201539328)	+	(CGC)n	Simple_repeat	1	88	(0)	91560
14	12.0	0.0	0.0	chr1	47444806	47444832	(201511590)	+	(GGCGC)n	Simple_repeat	1	27	(0)	91608
307	25.0	19.0	1.5	chr1	47710396	47710525	(201245897)	C	MIRc	SINE/MIR	(104)	164	7	92155
283	34.2	10.7	5.7	chr1	48498426	48499021	(200457401)	C	MamGypLTR3	LTR/Gypsy	(0)	894	266	93402
14	22.6	0.0	0.0	chr1	52142246	52142281	(196814141)	+	(AGC)n	Simple_repeat	1	36	(0)	100279
12	16.9	2.9	2.8	chr1	52843544	52843583	(196112839)	+	(GTCCC)n	Simple_repeat	1	40	(0)	101893
336	27.5	10.3	4.7	chr1	53125322	53125512	(195830910)	+	MamGypLTR3a	LTR/Gypsy	151	353	(628)	102487
249	21.6	0.0	0.0	chr1	53125897	53125947	(195830475)	+	MamGypLTR3a	LTR/Gypsy	848	898	(83)	102487
708	29.9	10.2	3.0	chr1	53125972	53126409	(195830013)	C	MamRep137	DNA/TcMar-Tigger	(36)	474	2	102488
6574	10.5	2.1	2.6	chr1	53185249	53186207	(195770215)	C	LTR13_	LTR/ERVK	(0)	954	1	102618
180	26.7	1.6	3.2	chr1	53238890	53238951	(195717471)	+	MIR1_Amn	SINE/MIR	109	169	(61)	102710
7059	11.0	1.7	2.2	chr1	53444448	53445459	(195510963)	+	LTR13	LTR/ERVK	1	1007	(0)	103096
2325	10.9	0.0	0.0	chr1	53469794	53470095	(195486327)	+	AluSz	SINE/Alu	1	302	(10)	103143
257	36.2	8.2	4.0	chr1	53470553	53470949	(195485473)	+	L2b	LINE/L2	2961	3375	(0)	103144
196	23.1	1.9	1.9	chr1	53541507	53541559	(195414863)	+	L2b	LINE/L2	3318	3370	(5)	103279
250	32.2	7.6	4.7	chr1	53541727	53541853	(195414569)	C	MIRc	SINE/MIR	(45)	223	93	103283
22195	10.5	2.0	0.7	chr1	53810764	53814071	(195142351)	+	L1PB1	LINE/L1	255	3647	(3215)	103813
1639	14.0	3.3	0.4	chr1	54181671	54181934	(194774488)	+	AluJb	SINE/Alu	2	273	(39)	104601
4745	25.1	7.6	2.9	chr1	55612877	55614393	(193342029)	+	Arthur1	DNA/hAT-Tip100	1	1594	(2353)	107415
184	25.6	0.0	0.0	chr1	56803941	56803983	(192152439)	+	MER5B	DNA/hAT-Charlie	1	43	(135)	109532
525	30.5	0.8	0.0	chr1	58515770	58515900	(190440522)	+	MIR3	SINE/MIR	71	202	(6)	113017
2214	15.1	3.0	6.5	chr1	59506983	59507400	(189449022)	C	MER57B2	LTR/ERV1	(0)	403	1	114989
22879	10.0	2.1	0.4	chr1	61543737	61547892	(187408530)	C	L1PB1	LINE/L1	(1747)	5115	877	118342
5073	9.3	0.8	0.6	chr1	61547898	61548683	(187407739)	C	L1M1	LINE/L1	(1393)	6172	5386	118344
8581	22.9	8.1	4.2	chr1	62656532	62658171	(186298251)	+	L1MDa	LINE/L1	14	1743	(4890)	120585
477	34.1	6.4	0.4	chr1	62727525	62727789	(186228633)	C	HAL1	LINE/L1	(2210)	297	16	120717
394	23.1	4.4	7.8	chr1	62727810	62727901	(186228521)	C	LTR81A	LTR/Gypsy	(1204)	146	56	120719
1981	19.7	9.1	6.2	chr1	62727902	62728372	(186228050)	C	MER66B	LTR/ERV1	(0)	486	1	120720
394	23.1	4.4	7.8	chr1	62728373	62728420	(186228002)	C	LTR81A	LTR/Gypsy	(1295)	55	11	120719
1184	16.3	5.7	4.7	chr1	62728434	62728691	(186227731)	+	MER63D	DNA/hAT-Blackjack	8	268	(793)	120721
1788	22.6	6.0	7.8	chr1	62848578	62849158	(186107264)	C	L1MC4	LINE/L1	(128)	7914	7345	120915
515	23.8	1.8	2.6	chr1	62849302	62849511	(186106911)	C	L1ME3Cz	LINE/L1	(4677)	1956	1729	120910
289	17.5	1.6	11.3	chr1	63155667	63155737	(185800685)	C	L2b	LINE/L2	(5)	3421	3321	121490
194	28.3	3.6	0.0	chr1	63155792	63155844	(185800578)	+	L2c	LINE/L2	3103	3157	(230)	121491
22	20.2	7.4	1.1	chr1	63523647	63523727	(185432695)	+	(TCTCTG)n	Simple_repeat	1	87	(0)	122201
2107	12.0	4.6	0.0	chr1	67212868	67213159	(181743263)	C	AluSx1	SINE/Alu	(6)	306	1	128426
379	26.7	9.7	13.4	chr1	67213160	67213335	(181743087)	+	MIR	SINE/MIR	86	257	(5)	128424
1587	16.1	9.1	1.3	chr1	67213501	67213815	(181742607)	+	Tigger3a	DNA/TcMar-Tigger	6	347	(1)	128427
2081	25.9	4.6	4.0	chr1	69305314	69305738	(179650684)	+	L1ME3A	LINE/L1	5351	5785	(458)	131858
4568	12.5	5.0	1.5	chr1	69305739	69306493	(179649929)	C	LTR1	LTR/ERV1	(0)	783	1	131865
2555	23.9	9.7	1.9	chr1	70684531	70685510	(178270912)	C	L1PB4	LINE/L1	(4501)	2418	1302	133823
467	33.9	6.4	1.8	chr1	70685513	70685794	(178270628)	C	L1PB4	LINE/L1	(5290)	1629	1334	133823
1353	29.7	4.9	7.8	chr1	70685924	70686829	(178269593)	C	L1PB4	LINE/L1	(5841)	1094	217	133823
2163	11.6	2.3	2.6	chr1	74022082	74022392	(174934030)	+	AluSx3	SINE/Alu	2	311	(0)	138123
15	30.4	1.4	2.7	chr1	75724615	75724686	(173231736)	+	(CCGCC)n	Simple_repeat	1	73	(0)	140345
1944	15.0	3.3	7.5	chr1	76699713	76699753	(172256669)	+	L1MA8	LINE/L1	6038	6073	(218)	141810
680	13.8	10.4	7.5	chr1	77921144	77921302	(171035120)	+	AluJr	SINE/Alu	86	249	(63)	143761
17	3.9	3.7	0.0	chr1	77921305	77921331	(171035091)	+	(AAAC)n	Simple_repeat	1	28	(0)	143762
1784	17.0	1.5	1.5	chr1	78114653	78114981	(170841441)	+	L1MC1	LINE/L1	5999	6327	(6)	144118
5457	23.0	4.0	3.0	chr1	78671941	78673808	(170282614)	C	L1PBb	LINE/L1	(5220)	1643	634	144877
4237	16.5	0.7	0.8	chr1	80799351	80800061	(168156361)	C	MER50	LTR/ERV1	(24)	710	1	147608
241	30.3	6.8	1.3	chr1	83850233	83850263	(165106159)	C	LTR78B	LTR/ERV1	(657)	639	607	151729
48	0.0	0.0	0.0	chr1	83850264	83850304	(165106118)	+	(CA)n	Simple_repeat	1	41	(0)	151730
241	30.3	6.8	1.3	chr1	83850305	83850426	(165105996)	C	LTR78B	LTR/ERV1	(690)	606	477	151729
12	16.9	0.0	0.0	chr1	84620578	84620604	(164335818)	+	(CTTC)n	Simple_repeat	1	27	(0)	152805
18	19.6	0.0	4.0	chr1	84621094	84621143	(164335279)	+	G-rich	Low_complexity	1	50	(0)	152806
357	29.7	16.4	2.5	chr1	84753312	84753635	(164202787)	+	L2a	LINE/L2	3049	3426	(0)	153023
837	22.0	3.4	7.8	chr1	85735096	85735312	(163221110)	C	MER63A	DNA/hAT-Blackjack	(0)	210	4	154671
1611	17.2	0.0	1.8	chr1	88878021	88878293	(160078129)	+	AluJb	SINE/Alu	35	302	(10)	159148
11	20.8	0.0	2.9	chr1	89633168	89633202	(159323220)	+	(CGCGGC)n	Simple_repeat	1	35	(0)	160109
364	35.8	4.6	1.0	chr1	91819873	91820066	(157136356)	+	MIRb	SINE/MIR	14	222	(46)	163288
13	30.0	0.0	4.5	chr1	92480818	92480883	(156475539)	+	(CCGGCCG)n	Simple_repeat	1	66	(0)	164559
13	4.1	3.7	3.6	chr1	93179890	93179916	(155776506)	+	(GCCTC)n	Simple_repeat	1	28	(0)	165854
13	9.7	0.0	0.0	chr1	93180359	93180380	(155776042)	+	(GGC)n	Simple_repeat	1	22	(0)	165855
14	15.4	6.7	2.1	chr1	93680930	93680974	(155275448)	+	(CCTTC)n	Simple_repeat	1	48	(0)	166665
7798	5.2	4.5	0.0	chr1	93850273	93851234	(155105188)	C	LTR13	LTR/ERVK	(0)	1007	1	166933
485	31.9	10.6	3.8	chr1	94025181	94025939	(154930483)	+	L2a	LINE/L2	2528	3425	(1)	167173
2089	13.8	0.3	2.0	chr1	94805615	94805910	(154150512)	+	AluJr4	SINE/Alu	1	291	(21)	168339
22	24.8	0.0	2.9	chr1	94806143	94806212	(154150210)	+	A-rich	Low_complexity	1	70	(0)	168340
1401	17.4	1.5	4.4	chr1	96596140	96596215	(152360207)	C	AluJb	SINE/Alu	(236)	76	1	170882
16	0.0	0.0	0.0	chr1	96596252	96596269	(152360153)	+	(A)n	Simple_repeat	1	18	(0)	170884
312	28.7	9.5	9.1	chr1	96596423	96596652	(152359770)	C	Tigger12	DNA/TcMar-Tigger	(2186)	289	59	170885
393	31.7	0.7	1.4	chr1	96596664	96596807	(152359615)	C	MER5A	DNA/hAT-Charlie	(0)	189	47	170886
644	13.8	0.0	5.7	chr1	100463534	100463656	(148492766)	+	MER53	DNA/hAT	1	116	(77)	176625
14	18.3	5.7	3.6	chr1	100539548	100539600	(148416822)	+	(GCT)n	Simple_repeat	1	56	(0)	176730
351	38.2	5.6	0.0	chr1	100750009	100750160	(148206262)	+	LTR81C	LTR/Gypsy	777	937	(413)	176998
1589	32.3	10.7	6.0	chr1	101344330	101345565	(147610857)	+	L3	LINE/CR1	1696	2996	(1103)	177910
1724	12.8	5.1	0.0	chr1	101345740	101346020	(147610402)	C	L1PA16	LINE/L1	(4)	6162	5867	177911
558	6.9	3.3	0.0	chr1	101346056	101346142	(147610280)	C	L1P4	LINE/L1	(731)	5435	5346	177912
8008	13.1	10.8	3.0	chr1	102853604	102855052	(146101370)	+	LTR12C	LTR/ERV1	3	1579	(0)	179837
3683	19.8	4.0	3.9	chr1	106975501	106976266	(141980156)	+	L1M3f	LINE/L1	4	770	(4558)	184760
13	23.6	1.9	3.7	chr1	108200192	108200244	(140756178)	+	G-rich	Low_complexity	1	54	(0)	186508
1443	22.2	7.5	3.2	chr1	110196560	110197029	(138759393)	C	Charlie4a	DNA/hAT-Charlie	(16)	492	1	189721
845	16.2	0.8	0.0	chr1	111507141	111507257	(137449165)	+	AluJr	SINE/Alu	1	118	(194)	191628
14	14.6	0.0	3.1	chr1	112509388	112509419	(136447003)	+	(CTG)n	Simple_repeat	1	32	(0)	193235
12	16.6	4.5	4.3	chr1	112718670	112718713	(136237709)	+	(TCACTCC)n	Simple_repeat	1	46	(0)	193636
19	21.4	7.8	1.2	chr1	112718916	112718992	(136237430)	+	(GGC)n	Simple_repeat	1	83	(0)	193637
7674	13.1	13.4	4.7	chr1	112894526	112895956	(136060466)	+	LTR12C	LTR/ERV1	4	1579	(0)	194004
11448	9.1	1.6	0.6	chr1	113717923	113718988	(135237434)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	499	195393
214	34.9	1.9	4.3	chr1	115138857	115138988	(133817434)	+	L2a	LINE/L2	3263	3424	(2)	197757
3673	16.8	0.7	1.1	chr1	115563569	115564315	(133392107)	+	L1MA4A	LINE/L1	3860	4603	(2959)	198376
25	16.9	0.0	0.0	chr1	115564394	115564441	(133391981)	+	(CGC)n	Simple_repeat	1	48	(0)	198380
2744	16.6	2.5	1.9	chr1	116967403	116967929	(131988493)	C	L1MB7	LINE/L1	(0)	6184	5655	200563
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
202	28.4	8.7	4.0	chr1	147242302	147242400	(101714022)	+	L2b	LINE/L2	3271	3374	(1)	213841
1505	0.6	0.0	0.0	chr1	148038753	148038916	(100917506)	C	U1	snRNA	(1)	164	1	215030
2433	7.7	0.0	0.0	chr1	150630024	150630321	(98326101)	+	AluSx1	SINE/Alu	1	298	(14)	219492
10618	7.1	9.4	0.1	chr1	151905953	151907383	(97049039)	+	LTR12C	LTR/ERV1	2	1579	(0)	222093
230	31.6	6.5	0.8	chr1	152441277	152441444	(96514978)	C	MIR	SINE/MIR	(34)	234	46	222795
5180	13.5	1.4	1.0	chr1	152543309	152544104	(96412318)	+	LTR1A1	LTR/ERV1	1	799	(0)	222932
289	31.7	5.7	7.0	chr1	153797349	153797505	(95158917)	+	CR1_Mam	LINE/CR1	1145	1302	(902)	224781
2289	6.5	0.0	0.0	chr1	153797506	153797796	(95158626)	C	AluSc	SINE/Alu	(18)	291	1	224782
2132	13.8	0.0	0.0	chr1	154276598	154276886	(94679536)	+	AluSq2	SINE/Alu	1	289	(24)	225798
1103	10.9	3.8	16.0	chr1	154276937	154277174	(94679248)	C	AluJb	SINE/Alu	(18)	294	87	225799
2389	8.7	0.7	0.3	chr1	155040023	155040332	(93916090)	+	AluSx3	SINE/Alu	1	311	(0)	227244
243	33.5	5.4	7.1	chr1	155040333	155040392	(93916030)	+	MIR3	SINE/MIR	141	202	(6)	227242
491	27.7	9.9	6.8	chr1	155050162	155050377	(93906045)	+	MIRc	SINE/MIR	3	221	(47)	227263
785	26.0	5.6	0.8	chr1	155226394	155226649	(93729773)	C	L2	LINE/L2	(414)	3005	2737	227578
222	33.1	5.9	4.5	chr1	155226694	155226826	(93729596)	+	L2c	LINE/L2	3052	3186	(189)	227579
554	14.9	0.0	0.0	chr1	155226863	155226965	(93729457)	C	FLAM_C	SINE/Alu	(90)	212	38	227580
12	12.6	0.0	3.6	chr1	155250854	155250881	(93705541)	+	(GCCTG)n	Simple_repeat	1	28	(0)	227620
2403	9.0	0.0	0.7	chr1	155252899	155253208	(93703214)	C	AluYj4	SINE/Alu	(3)	308	1	227626
2332	10.6	0.0	1.3	chr1	155253209	155253343	(93703079)	C	AluSq2	SINE/Alu	(179)	134	2	227625
32	13.5	0.0	3.2	chr1	155562416	155562477	(93393945)	+	(GGC)n	Simple_repeat	1	62	(0)	228300
27	5.6	0.0	2.6	chr1	155562800	155562838	(93393584)	+	(CCT)n	Simple_repeat	1	39	(0)	228301
18	31.1	1.2	2.3	chr1	155562840	155562848	(93393574)	+	(CCCCCG)n	Simple_repeat	1	22	(65)	228302
23	17.6	0.0	3.6	chr1	155562849	155562903	(93393519)	+	(CCG)n	Simple_repeat	1	55	(0)	228303
2268	9.3	0.0	0.0	chr1	156025555	156025854	(92930568)	+	AluSx1	SINE/Alu	2	301	(11)	229315
193	16.7	2.3	0.0	chr1	156026164	156026205	(92930217)	+	L2c	LINE/L2	3268	3310	(77)	229316
31	23.7	0.0	0.0	chr1	156660382	156660448	(92295974)	+	(GT)n	Simple_repeat	1	67	(0)	230532
9748	15.4	3.0	0.3	chr1	157439405	157440941	(91515481)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	231718
13	24.0	1.4	8.0	chr1	160370810	160370883	(88585539)	+	G-rich	Low_complexity	1	75	(0)	235643
13	0.0	0.0	0.0	chr1	161074267	161074283	(87882139)	+	(CAC)n	Simple_repeat	1	17	(0)	236825
869	19.4	3.4	2.2	chr1	161787255	161787462	(87168960)	C	L1MC4	LINE/L1	(953)	7089	6874	238112
740	20.5	3.0	1.2	chr1	162522188	162522350	(86434072)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	239289
22	19.5	0.0	0.0	chr1	166166688	166166734	(82789688)	+	(GCC)n	Simple_repeat	1	47	(0)	244900
19	17.7	0.0	6.9	chr1	166166779	166166836	(82789586)	+	(GCG)n	Simple_repeat	1	58	(0)	244901
19	4.5	0.0	0.0	chr1	167646447	167646469	(81309953)	+	(A)n	Simple_repeat	1	23	(0)	247061
399	24.2	0.0	7.1	chr1	168452495	168452592	(80503830)	C	Tigger16a	DNA/TcMar-Tigger	(772)	185	95	248429
214	32.0	0.0	2.5	chr1	168452600	168452679	(80503743)	+	X6A_LINE	LINE/CR1	1001	1078	(2)	248430
32	2.9	0.0	0.0	chr1	169787167	169787201	(79169221)	+	(TGCAGTG)n	Simple_repeat	1	35	(0)	250454
2035	16.4	10.5	1.8	chr1	169787270	169787711	(79168711)	+	MER31A	LTR/ERV1	1	485	(0)	250455
310	30.1	7.0	4.9	chr1	171655755	171655939	(77300483)	+	L2c	LINE/L2	3199	3384	(3)	253102
1870	16.9	0.6	3.4	chr1	171726950	171727269	(77229153)	+	AluJr	SINE/Alu	1	311	(1)	253229
2747	18.0	10.1	2.5	chr1	171727270	171727999	(77228423)	+	L1ME1	LINE/L1	5282	6076	(103)	253223
262	30.9	8.4	1.3	chr1	171742512	171742665	(77213757)	C	MIR3	SINE/MIR	(11)	197	32	253261
14	28.5	3.1	1.5	chr1	171841146	171841210	(77115212)	+	(GGTGCT)n	Simple_repeat	1	67	(0)	253434
18	12.1	0.0	5.0	chr1	171841403	171841442	(77114980)	+	G-rich	Low_complexity	1	40	(0)	253435
5391	27.5	6.7	9.1	chr1	172726724	172728737	(76227685)	+	L1PA15-16	LINE/L1	4	1950	(4985)	254632
10058	12.3	4.0	1.6	chr1	174410276	174413996	(74542426)	C	L1PA16	LINE/L1	(1056)	5793	1283	257174
1720	15.8	3.4	1.2	chr1	174413997	174414316	(74542106)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(741)	327	1	257173
31	3.1	0.0	0.0	chr1	174799759	174799791	(74156631)	+	(GCA)n	Simple_repeat	1	33	(0)	257708
57	0.0	0.0	0.0	chr1	174799931	174799979	(74156443)	+	(CA)n	Simple_repeat	1	49	(0)	257709
385	32.8	0.0	0.0	chr1	175155236	175155360	(73801062)	+	L2c	LINE/L2	2036	2160	(1259)	258299
631	28.6	9.6	1.7	chr1	175155364	175155598	(73800824)	C	MIR	SINE/MIR	(0)	268	23	258300
370	22.2	0.0	1.2	chr1	175887938	175888019	(73068403)	C	MER5A	DNA/hAT-Charlie	(0)	189	109	259395
304	25.3	0.0	2.1	chr1	175888020	175888030	(73068392)	+	MER5B	DNA/hAT-Charlie	1	91	(87)	259396
1452	11.9	9.1	3.7	chr1	178379920	178380188	(70576234)	C	AluJb	SINE/Alu	(27)	285	1	263006
2178	11.0	1.7	0.0	chr1	178543665	178543955	(70412467)	C	AluSz	SINE/Alu	(16)	296	1	263239
7402	17.1	4.7	3.7	chr1	178768043	178770015	(70186407)	C	L1PA15-16	LINE/L1	(4862)	1991	85	263635
44	2.4	0.0	0.0	chr1	179815110	179815151	(69141271)	+	(CA)n	Simple_repeat	1	42	(0)	265353
410	32.5	7.2	1.3	chr1	180187944	180188177	(68768245)	C	MIR	SINE/MIR	(2)	260	12	266008
201	30.8	2.8	8.0	chr1	181425552	181425664	(67530758)	C	MIR3	SINE/MIR	(0)	208	102	267971
12	14.8	6.5	7.6	chr1	181425724	181425785	(67530637)	+	(CTCTTT)n	Simple_repeat	1	66	(0)	267972
581	32.9	10.4	1.6	chr1	182766041	182766426	(66189996)	+	L2b	LINE/L2	2485	2908	(511)	270022
1694	15.5	7.1	7.5	chr1	182786488	182786705	(66169717)	+	L1MB7	LINE/L1	5966	6182	(2)	270053
2368	10.1	1.0	0.0	chr1	182806832	182807137	(66149285)	C	AluSc8	SINE/Alu	(2)	309	1	270089
6609	11.8	11.3	1.9	chr1	187550321	187551453	(61404969)	C	LTR12D	LTR/ERV1	(0)	1254	1	277183
1901	19.4	4.2	1.3	chr1	187551454	187551840	(61404582)	C	MLT1A1	LTR/ERVL-MaLR	(8)	400	1	277184
2420	18.7	2.0	2.7	chr1	194076061	194076549	(54879873)	+	MER66B	LTR/ERV1	1	486	(0)	285662
442	31.0	7.2	8.2	chr1	194076550	194076846	(54879576)	+	LTR68	LTR/ERV1	152	445	(295)	285661
4676	14.0	1.7	1.2	chr1	194342379	194343157	(54613265)	+	LTR1	LTR/ERV1	1	783	(0)	286016
72	20.6	9.2	0.0	chr1	194343158	194343214	(54613208)	+	(TA)n	Simple_repeat	2	65	(0)	286017
13	0.0	0.0	0.0	chr1	200873648	200873664	(48082758)	+	(TGC)n	Simple_repeat	1	17	(0)	295136
345	35.1	6.9	2.9	chr1	200980022	200980229	(47976193)	+	Charlie22a	DNA/hAT-Charlie	165	381	(110)	295324
527	32.8	2.0	4.8	chr1	201119389	201119596	(47836826)	+	MamGypLTR3	LTR/Gypsy	599	800	(94)	295526
191	34.7	6.9	0.0	chr1	201709819	201709939	(47246483)	+	MIR3	SINE/MIR	48	177	(31)	296517
2620	5.3	0.0	0.0	chr1	203861065	203861367	(45095055)	+	AluSc8	SINE/Alu	1	303	(8)	300474
1734	16.1	3.0	1.3	chr1	205141373	205141671	(43814751)	+	AluJo	SINE/Alu	1	304	(8)	302876
243	29.6	0.0	0.0	chr1	207998052	207998122	(40958300)	C	MIRb	SINE/MIR	(24)	244	174	307455
412	28.2	10.3	4.4	chr1	209577075	209577256	(39379166)	C	MIRc	SINE/MIR	(49)	219	26	309868
440	35.2	8.0	8.4	chr1	209748206	209748670	(39207752)	+	L2c	LINE/L2	2924	3386	(1)	310137
2358	23.6	4.0	3.7	chr1	211206759	211207060	(37749362)	+	L1MEf	LINE/L1	1278	1562	(4638)	312269
295	28.3	22.0	0.5	chr1	212664925	212665109	(36291313)	C	MIRb	SINE/MIR	(19)	249	14	314922
13	22.0	2.2	2.2	chr1	212665501	212665545	(36290877)	+	(CTCTTCC)n	Simple_repeat	1	46	(0)	314923
14	12.2	0.0	0.0	chr1	212665650	212665676	(36290746)	+	(CTCCC)n	Simple_repeat	1	27	(0)	314924
1594	21.0	0.0	1.8	chr1	219962379	219962664	(28993758)	+	AluJr	SINE/Alu	2	282	(30)	325397
728	25.4	1.1	2.3	chr1	219962689	219962865	(28993557)	+	U3	snRNA	43	217	(0)	325398
15	0.0	4.5	0.0	chr1	219962874	219962895	(28993527)	+	(AAAT)n	Simple_repeat	1	23	(0)	325399
3044	16.6	2.6	1.6	chr1	219962896	219963501	(28992921)	+	L1MB2	LINE/L1	5550	6161	(10)	325400
226	26.6	18.6	0.0	chr1	220296537	220296615	(28659807)	C	MIRc	SINE/MIR	(169)	99	3	325994
2386	11.8	0.0	0.0	chr1	220296678	220296973	(28659449)	C	AluSx1	SINE/Alu	(16)	296	1	325995
253	29.1	5.4	9.0	chr1	220810149	220810303	(28146119)	C	Charlie23a	DNA/hAT-Charlie	(147)	192	44	326776
12171	19.3	4.5	0.6	chr1	221944866	221947144	(27009278)	C	L1M1	LINE/L1	(5177)	2388	18	328425
550	16.4	3.3	2.5	chr1	223133391	223133509	(25822913)	C	MER5A1	DNA/hAT-Charlie	(33)	133	14	330256
486	25.0	1.7	0.8	chr1	223134016	223134132	(25822290)	+	MIRb	SINE/MIR	55	172	(96)	330257
18	18.9	2.3	2.2	chr1	223557257	223557300	(25399122)	+	(TG)n	Simple_repeat	1	45	(0)	330899
756	24.4	1.6	2.4	chr1	223711940	223712168	(25244254)	+	MIRb	SINE/MIR	12	238	(30)	331089
15	21.8	0.0	0.0	chr1	223748970	223749006	(25207416)	+	GA-rich	Low_complexity	1	37	(0)	331158
458	33.8	2.2	3.2	chr1	225345150	225345430	(23610992)	+	CR1-3_Croc	LINE/CR1	2496	2773	(832)	333825
450	26.9	7.8	1.4	chr1	225345461	225345675	(23610747)	+	MER112	DNA/hAT-Charlie	2	231	(30)	333826
688	15.2	1.7	0.0	chr1	225777131	225777248	(23179174)	C	AluJb	SINE/Alu	(8)	304	185	334566
200	30.8	10.1	3.6	chr1	225777463	225777600	(23178822)	+	L2c	LINE/L2	3231	3378	(9)	334567
282	25.4	2.7	0.0	chr1	225962681	225962751	(22993671)	C	MIR3	SINE/MIR	(72)	136	64	334901
22	21.9	1.3	4.0	chr1	225962850	225962877	(22993545)	+	(TAA)n	Simple_repeat	1	27	(0)	334902
1806	11.5	2.8	5.4	chr1	225962878	225963172	(22993250)	+	AluSx	SINE/Alu	1	287	(25)	334903
767	10.5	1.5	13.2	chr1	226548168	226548319	(22408103)	C	FLAM_C	SINE/Alu	(9)	134	1	336099
697	20.1	14.7	1.2	chr1	226832895	226833105	(22123317)	C	MER31A	LTR/ERV1	(0)	543	240	336562
189	32.0	1.9	2.8	chr1	227542900	227543005	(21413417)	+	MIRb	SINE/MIR	115	219	(49)	337629
53	0.0	0.0	0.0	chr1	227953874	227953918	(21002504)	+	(GT)n	Simple_repeat	1	45	(0)	338094
49	3.0	4.1	2.6	chr1	227953919	227953991	(21002431)	+	(AGAGAC)n	Simple_repeat	1	76	(0)	338095
3445	19.6	11.5	2.1	chr1	227954212	227955110	(21001312)	C	L1MD2	LINE/L1	(48)	6311	5318	338096
2201	8.3	1.4	0.0	chr1	228103519	228103807	(20852615)	+	AluSz	SINE/Alu	1	293	(19)	338294
645	15.3	17.5	0.0	chr1	228103818	228103954	(20852468)	+	FRAM	SINE/Alu	1	166	(10)	338295
11	15.2	2.4	7.0	chr1	228212485	228212526	(20743896)	+	(CGCAC)n	Simple_repeat	1	43	(0)	338450
484	23.4	12.6	4.1	chr1	228243562	228243757	(20712665)	C	MIR	SINE/MIR	(0)	262	48	338489
1076	24.1	2.6	5.5	chr1	228243761	228244198	(20712224)	C	L1MEg	LINE/L1	(4567)	1517	1093	338490
12	31.8	0.0	1.8	chr1	228275625	228275680	(20680742)	+	G-rich	Low_complexity	1	56	(0)	338518
2327	9.1	0.0	0.0	chr1	228621129	228621435	(20334987)	+	AluY	SINE/Alu	1	307	(4)	338912
35	30.9	0.0	0.0	chr1	228622136	228622236	(20334186)	+	(CA)n	Simple_repeat	1	101	(0)	338915
63	31.5	1.7	0.8	chr1	228622248	228622488	(20333934)	+	GA-rich	Low_complexity	1	245	(0)	338916
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
15	21.3	9.3	0.0	chr1	228735308	228735361	(20221061)	+	(CG)n	Simple_repeat	1	59	(0)	339120
18	10.0	0.0	2.9	chr1	228735416	228735449	(20220973)	+	(CCCG)n	Simple_repeat	1	34	(0)	339121
1892	15.1	0.0	1.1	chr1	230167161	230167445	(18788977)	C	AluJo	SINE/Alu	(29)	283	2	341499
376	8.2	0.0	0.0	chr1	230269140	230269188	(18687234)	C	AluYg6	SINE/Alu	(10)	301	253	341623
2315	9.8	0.0	0.0	chr1	230269189	230269485	(18686937)	C	AluSz	SINE/Alu	(15)	297	1	341624
845	13.4	3.9	0.0	chr1	232880239	232880387	(16076035)	C	L1MA6	LINE/L1	(0)	6300	6146	345580
576	17.9	0.0	4.3	chr1	232880388	232880504	(16075918)	+	L1MA6	LINE/L1	6005	6116	(184)	345580
2509	30.4	11.7	6.1	chr1	232880510	232883318	(16073104)	+	L2a	LINE/L2	438	3425	(1)	345578
233	26.5	7.3	1.0	chr1	234089671	234089773	(14866649)	C	Charlie17a	DNA/hAT-Charlie	(16)	201	92	347340
180	15.9	0.0	10.2	chr1	234089779	234089827	(14866595)	+	X5B_LINE	LINE/CR1	141	184	(1)	347341
2462	6.0	0.0	0.7	chr1	234187955	234188252	(14768170)	+	AluSc8	SINE/Alu	1	296	(15)	347498
10417	10.4	3.8	1.9	chr1	234188253	234190779	(14765643)	+	L1PB1	LINE/L1	829	3414	(3448)	347497
2518	7.4	0.3	0.0	chr1	234509201	234509511	(14446911)	+	AluSp	SINE/Alu	1	312	(1)	347999
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
2992	26.0	6.1	2.2	chr1	239237002	239238046	(9718376)	+	L1ME1	LINE/L1	4268	5446	(733)	355801
1753	18.4	0.9	1.8	chr1	239238047	239238389	(9718033)	+	MER61A	LTR/ERV1	2	341	(0)	355802
2265	17.6	5.5	1.5	chr1	239555429	239555894	(9400528)	+	MER66B	LTR/ERV1	1	486	(0)	356316
2186	17.3	7.0	0.2	chr1	240224655	240225082	(8731340)	C	LOR1b	LTR/ERV1	(2)	459	1	357339
357	24.4	0.0	0.0	chr1	240225085	240225162	(8731260)	+	L1M4a2	LINE/L1	773	850	(1806)	357340
226	23.4	0.0	0.0	chr1	240225192	240225238	(8731184)	+	L1M4b	LINE/L1	1177	1223	(5644)	357335
4204	20.9	5.6	1.8	chr1	240225288	240226646	(8729776)	+	L1M4b	LINE/L1	1221	2922	(594)	357335
1541	26.1	6.2	1.0	chr1	241423267	241423789	(7532633)	C	L1MB8	LINE/L1	(7)	6171	5620	359282
1198	21.0	12.8	5.2	chr1	241423790	241424236	(7532186)	+	MER52D	LTR/ERV1	3	488	(1635)	359283
1055	18.3	2.6	3.8	chr1	241424635	241424984	(7531438)	+	MER52D	LTR/ERV1	470	884	(1239)	359283
11540	12.6	4.1	0.7	chr1	242650588	242653025	(6303397)	C	L1PBa1	LINE/L1	(4150)	2713	6	361304
26	3.3	0.0	0.0	chr1	243713744	243713774	(5242648)	+	(A)n	Simple_repeat	1	31	(0)	362959
6469	10.8	2.3	1.1	chr1	246970918	246971859	(1984563)	C	LTR13_	LTR/ERVK	(0)	954	1	368450
528	18.1	7.3	14.2	chr10	1046340	1046487	(132750935)	+	Tigger3c	DNA/TcMar-Tigger	346	482	(120)	372215
12	20.6	0.0	6.7	chr10	1363474	1363518	(132433904)	+	G-rich	Low_complexity	1	45	(0)	372514
4154	12.3	1.8	14.7	chr10	4148897	4149840	(129647582)	C	LTR1A2	LTR/ERV1	(0)	837	18	376120
224	26.6	0.0	5.9	chr10	5630009	5630076	(128167346)	+	MER91C	DNA/hAT-Tip100	77	140	(0)	378035
209	32.3	8.6	2.3	chr10	5630102	5630219	(128167203)	C	L2c	LINE/L2	(4)	3383	3256	378036
1786	19.9	3.6	3.1	chr10	5630220	5630607	(128166815)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	378037
12	12.0	3.7	0.0	chr10	6203364	6203390	(127594032)	+	(GCCGG)n	Simple_repeat	1	28	(0)	379103
854	14.4	0.8	0.0	chr10	6918066	6918197	(126879225)	C	MER4A	LTR/ERV1	(0)	664	532	380266
876	32.4	5.3	0.0	chr10	6918207	6918542	(126878880)	C	L2b	LINE/L2	(942)	2477	2123	380265
237	32.8	4.9	8.1	chr10	6918806	6918841	(126878581)	+	L3	LINE/CR1	3954	3985	(114)	380267
2433	16.2	14.3	1.0	chr10	6918842	6919321	(126878101)	C	MLT2B4	LTR/ERVL	(2)	554	1	380268
21	7.7	0.0	0.0	chr10	7872214	7872241	(125925181)	+	(T)n	Simple_repeat	1	28	(0)	381768
11	30.9	0.0	0.0	chr10	8043684	8043727	(125753695)	+	(GGAGGCG)n	Simple_repeat	1	44	(0)	382050
424	23.5	1.0	0.0	chr10	11902090	11902187	(121895235)	+	MER5A1	DNA/hAT-Charlie	68	166	(0)	387724
186	27.7	0.0	0.0	chr10	11902230	11902276	(121895146)	+	L2b	LINE/L2	3095	3141	(234)	387725
30	0.0	0.0	0.0	chr10	11902331	11902356	(121895066)	+	(CA)n	Simple_repeat	1	26	(0)	387726
329	15.2	4.3	0.0	chr10	11987107	11987172	(121810250)	+	L1ME3	LINE/L1	6017	6085	(77)	387896
1175	27.7	6.2	1.7	chr10	14032107	14032521	(119764901)	C	MER20B	DNA/hAT-Charlie	(40)	743	309	391794
2588	12.3	10.6	0.2	chr10	14039527	14039929	(119757493)	+	MER4A1	LTR/ERV1	21	472	(0)	391814
23	15.4	0.0	0.0	chr10	14039930	14039972	(119757450)	+	(TATG)n	Simple_repeat	1	43	(0)	391816
946	22.3	2.6	1.7	chr10	14039992	14040224	(119757198)	C	MIR	SINE/MIR	(26)	236	2	391817
1418	22.4	7.1	4.8	chr10	14492034	14492120	(119305302)	+	MLT1E2	LTR/ERVL-MaLR	220	310	(317)	392556
41	9.5	0.0	0.0	chr10	14492121	14492178	(119305244)	+	(CA)n	Simple_repeat	1	58	(0)	392557
1418	22.4	7.1	4.8	chr10	14492179	14492488	(119304934)	+	MLT1E2	LTR/ERVL-MaLR	311	627	(0)	392556
2381	11.2	0.0	0.0	chr10	14492494	14492805	(119304617)	+	AluSx1	SINE/Alu	1	312	(0)	392558
656	27.3	10.6	7.3	chr10	14953282	14953680	(118843742)	+	LTR82A	LTR/ERVL	441	854	(18)	393353
77	25.2	3.3	6.1	chr10	15168719	15169113	(118628309)	+	(CGCCC)n	Simple_repeat	1	408	(0)	393755
2507	20.3	4.2	0.7	chr10	16027538	16028082	(117769340)	+	L1MCa	LINE/L1	1	565	(5943)	395155
935	20.0	4.9	0.0	chr10	16028088	16028282	(117769140)	+	Tigger1	DNA/TcMar-Tigger	1	205	(2213)	395156
1854	9.7	1.4	4.2	chr10	16437335	16437622	(117359800)	C	AluJo	SINE/Alu	(11)	301	22	395816
47	0.0	0.0	0.0	chr10	21241246	21241288	(112556134)	+	(AAAT)n	Simple_repeat	1	43	(0)	403214
22	29.0	0.0	0.0	chr10	22003318	22003381	(111794041)	+	(CAG)n	Simple_repeat	1	64	(0)	404666
16	23.4	0.0	2.1	chr10	22003596	22003642	(111793780)	+	(GGCG)n	Simple_repeat	1	47	(0)	404667
691	17.5	1.4	0.0	chr10	22438011	22438147	(111359275)	C	L1PB4	LINE/L1	(3)	6153	6015	405261
17	0.0	0.0	6.9	chr10	22438201	22438229	(111359193)	+	(CAAAA)n	Simple_repeat	1	29	(0)	405262
1981	15.3	7.2	7.0	chr10	23456479	23456812	(110340610)	C	MER34C_	LTR/ERV1	(208)	377	37	406930
44	0.0	0.0	0.0	chr10	23456967	23457004	(110340418)	+	(TG)n	Simple_repeat	1	38	(0)	406934
17	0.0	0.0	0.0	chr10	23457005	23457023	(110340399)	+	(CG)n	Simple_repeat	1	19	(0)	406935
200	29.0	2.8	0.0	chr10	23457054	23457122	(110340300)	+	MER5B	DNA/hAT-Charlie	102	172	(6)	406936
2103	13.1	0.7	0.7	chr10	24675869	24676166	(109121256)	+	AluSx	SINE/Alu	4	301	(11)	408865
329	21.5	0.0	7.9	chr10	24676282	24676382	(109121040)	C	L1PA16	LINE/L1	(4)	6162	6070	408866
1530	10.6	3.7	0.0	chr10	24676452	24676686	(109120736)	+	L1PB4	LINE/L1	5908	6151	(5)	408867
601	31.0	8.6	1.4	chr10	24676712	24676921	(109120501)	+	MIRb	SINE/MIR	34	261	(7)	408868
35	30.6	0.8	2.4	chr10	26891121	26891246	(106906176)	+	(TG)n	Simple_repeat	1	127	(0)	412513
518	25.8	6.6	7.0	chr10	28991998	28992210	(104805212)	C	L2c	LINE/L2	(0)	3387	3176	416095
30	3.5	0.0	0.0	chr10	31146757	31146786	(102650636)	+	(AC)n	Simple_repeat	1	30	(0)	419913
287	36.5	2.7	0.0	chr10	31836933	31837039	(101960383)	C	Tigger16a	DNA/TcMar-Tigger	(729)	228	119	420842
8304	7.7	10.6	0.1	chr10	33479736	33481029	(100316393)	C	LTR12C	LTR/ERV1	(145)	1434	3	423320
17	19.1	0.0	5.7	chr10	37976528	37976580	(95820842)	+	(CCCGG)n	Simple_repeat	1	53	(0)	430348
16	23.6	7.3	0.0	chr10	42242447	42242501	(91554921)	+	(CG)n	Simple_repeat	1	59	(0)	431872
13	26.2	4.5	2.9	chr10	42243469	42243535	(91553887)	+	(GCC)n	Simple_repeat	1	70	(0)	431874
12	14.7	0.0	5.9	chr10	43078611	43078644	(90718778)	+	(TGGCTT)n	Simple_repeat	1	34	(0)	432929
13	14.1	5.8	5.5	chr10	43420568	43420619	(90376803)	+	G-rich	Low_complexity	1	55	(0)	433467
1697	12.2	5.8	1.4	chr10	43420660	43420938	(90376484)	C	AluJo	SINE/Alu	(20)	292	1	433468
26	15.0	5.1	0.0	chr10	44385009	44385067	(89412355)	+	(GCGG)n	Simple_repeat	1	62	(0)	434788
20	19.8	1.6	4.6	chr10	44385138	44385201	(89412221)	+	(GGCGG)n	Simple_repeat	1	65	(0)	434789
1473	24.9	14.8	2.7	chr10	44865190	44865960	(88931462)	+	L1MEc	LINE/L1	48	927	(5473)	435328
288	24.5	5.4	4.5	chr10	45001361	45001471	(88795951)	C	MIR	SINE/MIR	(37)	225	114	435516
3023	25.6	10.1	10.6	chr10	47341029	47341585	(86455837)	+	L1ME1	LINE/L1	3568	4170	(2009)	439058
2220	12.5	12.4	0.8	chr10	48289934	48290311	(85507111)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	440351
21	4.1	0.0	0.0	chr10	48656266	48656290	(85141132)	+	(G)n	Simple_repeat	1	25	(0)	440835
360	32.4	7.4	2.5	chr10	56823906	56824229	(76973193)	+	L1PB4	LINE/L1	1380	1800	(5415)	451926
19	12.8	0.0	0.0	chr10	59709884	59709917	(74087505)	+	(AGG)n	Simple_repeat	1	34	(0)	455972
13	27.4	0.0	6.2	chr10	59709957	59710020	(74087402)	+	(CCCGG)n	Simple_repeat	1	64	(0)	455973
257	28.6	6.8	11.3	chr10	61592751	61593055	(72204367)	+	MamGypLTR3	LTR/Gypsy	602	981	(0)	458781
15	25.2	4.8	1.5	chr10	63133249	63133311	(70664111)	+	(GGC)n	Simple_repeat	1	66	(0)	461239
720	27.0	6.2	8.6	chr10	63901312	63901659	(69895763)	C	MER102b	DNA/hAT-Charlie	(1)	340	2	462597
4886	12.1	5.3	1.5	chr10	64040405	64041130	(69756292)	C	L1MA6	LINE/L1	(162)	6138	5380	462796
474	27.1	10.3	2.7	chr10	64041134	64041357	(69756065)	C	L1M3e	LINE/L1	(5425)	2140	1898	462798
226	18.8	0.0	0.0	chr10	64041385	64041432	(69755990)	C	L1M3e	LINE/L1	(4635)	1930	1883	462798
462	29.0	1.6	0.8	chr10	64041466	64041673	(69755749)	C	L1M3e	LINE/L1	(6676)	813	653	462798
208	25.4	1.7	7.8	chr10	69515961	69516024	(64281398)	+	L2a	LINE/L2	3367	3426	(0)	471756
190	19.4	0.0	0.0	chr10	69516062	69516092	(64281330)	C	MIR1_Amn	SINE/MIR	(77)	153	123	471758
660	25.7	5.6	3.6	chr10	69516145	69516338	(64281084)	C	MIRb	SINE/MIR	(25)	243	46	471759
17	21.3	4.0	6.3	chr10	69630003	69630078	(64167344)	+	(CTT)n	Simple_repeat	1	79	(0)	471961
14	18.5	2.7	9.2	chr10	69630061	69630134	(64167288)	+	(CCTCCCA)n	Simple_repeat	1	76	(0)	471962
12	24.6	0.0	2.5	chr10	69630455	69630494	(64166928)	+	(GCGG)n	Simple_repeat	1	40	(0)	471963
13	5.2	0.0	0.0	chr10	70145987	70146006	(63651416)	+	(CTC)n	Simple_repeat	1	20	(0)	472841
15	7.3	6.9	0.0	chr10	70146167	70146195	(63651227)	+	(GCA)n	Simple_repeat	1	31	(0)	472842
1714	13.0	9.4	0.3	chr10	70379796	70380103	(63417319)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	473334
6278	11.4	1.2	2.3	chr10	71955959	71956922	(61840500)	+	LTR13_	LTR/ERVK	1	954	(0)	476257
570	25.4	8.3	7.0	chr10	75084882	75085141	(58712281)	C	MIRb	SINE/MIR	(1)	267	1	482393
2350	4.8	0.0	0.0	chr10	75187679	75187946	(58609476)	C	AluSc8	SINE/Alu	(43)	268	1	482614
441	19.1	20.1	0.0	chr10	75188145	75188259	(58609163)	C	MER5A	DNA/hAT-Charlie	(19)	170	27	482615
18	16.1	1.9	5.5	chr10	75398685	75398738	(58398684)	+	(CCTCTC)n	Simple_repeat	1	55	(0)	483047
21	21.2	0.0	6.8	chr10	75398739	75398753	(58398669)	+	(TCCC)n	Simple_repeat	6	74	(0)	483048
336	38.4	3.9	1.7	chr10	76902652	76902894	(56894528)	+	MIR	SINE/MIR	7	260	(8)	485103
812	22.5	8.8	0.0	chr10	77719372	77719558	(56077864)	C	MIR	SINE/MIR	(8)	254	50	486476
595	30.3	10.4	2.4	chr10	77719570	77719860	(56077562)	C	MamGypLTR3a	LTR/Gypsy	(69)	912	596	486477
1875	13.1	0.0	0.4	chr10	77719872	77720138	(56077284)	C	AluSz	SINE/Alu	(8)	304	39	486478
16	0.0	0.0	0.0	chr10	78029613	78029630	(55767792)	+	(T)n	Simple_repeat	1	18	(0)	487025
853	24.2	5.0	0.4	chr10	78974938	78975165	(54822257)	C	MIR	SINE/MIR	(21)	241	3	488807
1642	29.2	6.2	1.8	chr10	79561611	79562238	(54235184)	C	L1MC4	LINE/L1	(139)	7903	7246	489860
353	13.3	0.0	0.0	chr10	79779619	79779678	(54017744)	+	L1ME4a	LINE/L1	6065	6124	(0)	490131
2481	24.4	4.7	3.7	chr10	80663434	80664199	(53133223)	C	Arthur1B	DNA/hAT-Tip100	(91)	1134	361	491587
196	21.1	1.9	1.9	chr10	84140031	84140083	(49657339)	C	MIRc	SINE/MIR	(102)	166	114	496387
461	27.0	11.2	3.6	chr10	84380591	84380689	(49416733)	+	MIR	SINE/MIR	5	118	(144)	496789
2419	7.1	0.0	2.3	chr10	84380690	84380999	(49416423)	C	AluY	SINE/Alu	(8)	303	1	496790
3688	22.9	6.0	5.3	chr10	84429882	84430910	(49366512)	C	L1M4	LINE/L1	(6463)	1054	19	496850
2615	16.2	1.0	3.8	chr10	86045981	86046480	(47750942)	+	MER66B	LTR/ERV1	1	486	(0)	498897
797	24.9	9.6	4.7	chr10	86100350	86100627	(47696795)	C	L2a	LINE/L2	(0)	3426	3134	498986
307	28.9	3.5	0.0	chr10	86100694	86100776	(47696646)	+	MLT1H2	LTR/ERVL-MaLR	101	186	(303)	498987
657	33.5	1.0	0.4	chr10	86100995	86101234	(47696188)	C	L2a	LINE/L2	(280)	3146	2899	498986
180	36.2	4.1	3.1	chr10	87505755	87505851	(46291571)	C	L2b	LINE/L2	(0)	3375	3278	501379
16653	9.9	4.0	0.3	chr10	87525540	87531312	(46266110)	C	L1PA5	LINE/L1	(0)	6154	22	501421
1764	14.7	10.1	0.0	chr10	87531623	87531935	(46265487)	+	Tigger4b	DNA/TcMar-Tigger	13	360	(1)	501422
588	29.2	16.3	4.4	chr10	87622496	87622966	(46174456)	C	MLT1K	LTR/ERVL-MaLR	(62)	533	4	501564
687	14.4	0.0	0.0	chr10	90880034	90880137	(42917285)	C	HY1	scRNA	(0)	119	16	506470
297	11.9	0.0	0.0	chr10	90880138	90880179	(42917243)	C	HY1	scRNA	(77)	42	1	506470
2286	10.7	2.8	0.0	chr10	90880446	90880726	(42916696)	+	AluSz	SINE/Alu	1	289	(23)	506471
401	30.2	5.7	4.2	chr10	91221314	91221492	(42575930)	C	MIRc	SINE/MIR	(59)	209	16	506999
343	29.6	3.9	0.8	chr10	91298047	91298172	(42499250)	C	Tigger16a	DNA/TcMar-Tigger	(417)	540	411	507110
17	4.9	0.0	0.0	chr10	91298174	91298194	(42499228)	+	(T)n	Simple_repeat	1	21	(0)	507111
11689	21.7	8.6	6.7	chr10	91468958	91470973	(42326449)	+	L1PA13	LINE/L1	2049	4307	(2459)	507347
41	6.4	0.0	0.0	chr10	91470974	91471022	(42326400)	+	(AC)n	Simple_repeat	1	49	(0)	507349
11689	13.0	2.5	0.6	chr10	91471023	91472780	(42324642)	+	L1PA13	LINE/L1	4297	6093	(692)	507347
181	26.9	1.9	0.0	chr10	92590807	92590858	(41206564)	C	L2a	LINE/L2	(978)	2441	2389	509463
3524	7.4	5.1	0.2	chr10	92591083	92591570	(41205852)	+	LTR10D	LTR/ERV1	1	513	(0)	509465
217	23.6	5.3	5.3	chr10	93062471	93062546	(40734876)	C	L2c	LINE/L2	(211)	3176	3101	510383
725	29.2	9.4	2.0	chr10	93126150	93126495	(40670927)	C	Tigger16a	DNA/TcMar-Tigger	(229)	728	355	510500
1109	25.3	10.2	3.0	chr10	93126834	93127339	(40670083)	+	Tigger18a	DNA/TcMar-Tigger	260	806	(46)	510501
2343	7.6	0.7	0.7	chr10	93541641	93541941	(40255481)	C	AluSq2	SINE/Alu	(12)	301	1	511313
527	30.0	8.7	7.5	chr10	93541942	93542073	(40255349)	C	L4_A_Mam	LINE/RTE-X	(439)	4551	4402	511312
436	27.2	9.1	2.5	chr10	93542103	93542347	(40255075)	C	MER102a	DNA/hAT-Charlie	(24)	306	44	511314
217	21.1	0.0	1.7	chr10	93542643	93542700	(40254722)	C	MIR3	SINE/MIR	(1)	207	151	511315
20	16.7	0.0	0.0	chr10	93702254	93702287	(40095135)	+	A-rich	Low_complexity	1	34	(0)	511623
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
4173	19.4	2.5	6.7	chr10	95132811	95133902	(38663520)	C	HUERS-P3-int	LTR/ERV1	(6351)	1067	23	513805
591	28.0	12.8	7.5	chr10	95374552	95374926	(38422496)	C	Tigger16a	DNA/TcMar-Tigger	(559)	398	1	514176
498	26.4	6.6	7.8	chr10	96090395	96090605	(37706817)	C	MIRb	SINE/MIR	(28)	240	37	515390
40	0.0	2.4	2.3	chr10	96229655	96229696	(37567726)	+	(TG)n	Simple_repeat	1	43	(0)	515592
318	20.2	19.3	3.7	chr10	96229886	96230054	(37567368)	+	MIR3	SINE/MIR	6	192	(16)	515593
287	31.2	9.8	2.3	chr10	97400789	97400980	(36396442)	+	MIR3	SINE/MIR	1	197	(11)	517895
673	26.1	11.5	8.0	chr10	97463454	97463589	(36333833)	C	MIR	SINE/MIR	(103)	159	28	518031
556	29.3	7.9	3.9	chr10	97464192	97464422	(36333000)	C	MIRb	SINE/MIR	(20)	248	8	518033
417	21.9	3.1	2.9	chr10	97915245	97915388	(35882034)	+	MIR3	SINE/MIR	23	151	(117)	519002
11060	19.5	4.1	4.2	chr10	99041171	99043202	(34754220)	+	L1PA16	LINE/L1	829	3129	(5032)	520861
14	4.5	4.3	0.0	chr10	99535279	99535301	(34262121)	+	(CGC)n	Simple_repeat	1	24	(0)	521637
33	2.9	0.0	0.0	chr10	99535437	99535471	(34261951)	+	(GCC)n	Simple_repeat	1	35	(0)	521638
20	11.0	2.4	2.4	chr10	99535513	99535553	(34261869)	+	(CGG)n	Simple_repeat	1	42	(0)	521639
2287	8.2	2.3	0.0	chr10	100111513	100111804	(33685618)	C	AluSp	SINE/Alu	(14)	299	1	522755
3455	10.8	3.1	3.5	chr10	100111805	100112223	(33685199)	+	LTR35A	LTR/ERV1	115	547	(0)	522756
180	32.2	18.3	2.6	chr10	100342669	100342824	(33454598)	+	L2c	LINE/L2	3018	3203	(184)	523181
21	20.9	1.6	3.1	chr10	100969452	100969515	(32827907)	+	(CCCCGC)n	Simple_repeat	1	65	(0)	524273
12	4.7	0.0	7.7	chr10	101050378	101050403	(32747019)	+	(CGCC)n	Simple_repeat	1	26	(0)	524384
13	13.5	0.0	7.9	chr10	101228924	101228961	(32568461)	+	(GGCCG)n	Simple_repeat	1	38	(0)	524694
184	20.8	3.6	1.9	chr10	101291128	101291181	(32506241)	C	MER5B	DNA/hAT-Charlie	(123)	55	1	524821
451	13.6	0.0	1.5	chr10	102155334	102155399	(31642023)	+	AluSq2	SINE/Alu	238	302	(11)	526393
578	14.8	0.0	1.1	chr10	102155405	102155492	(31641930)	C	AluJr	SINE/Alu	(195)	117	31	526394
2065	12.6	2.0	1.0	chr10	102155518	102155810	(31641612)	C	AluSx3	SINE/Alu	(15)	296	1	526395
236	14.7	9.3	11.7	chr10	102169678	102169695	(31627727)	C	L2c	LINE/L2	(8)	3379	3364	526418
2525	4.4	0.0	0.7	chr10	102169696	102169992	(31627430)	+	AluYk3	SINE/Alu	2	296	(15)	526419
373	26.8	18.6	0.0	chr10	102422465	102422621	(31374801)	+	MER102b	DNA/hAT-Charlie	71	263	(78)	526883
11515	9.7	0.7	2.6	chr10	103259113	103260391	(30537031)	+	THE1B-int	LTR/ERVL-MaLR	1	1280	(300)	528540
182	30.9	1.4	2.9	chr10	103605816	103605885	(30191537)	+	L3	LINE/CR1	1359	1427	(2672)	529289
14876	17.1	2.3	4.0	chr10	108783322	108786841	(25010581)	+	HUERS-P3-int	LTR/ERV1	22	3435	(5484)	537088
4233	19.1	8.9	8.9	chr10	112349574	112350869	(21446553)	+	LTR12E	LTR/ERV1	4	1300	(22)	542524
16	16.1	2.2	4.3	chr10	113126886	113126931	(20670491)	+	(GCGG)n	Simple_repeat	1	45	(0)	543814
395	28.1	8.2	7.4	chr10	113980869	113981228	(19816194)	+	L2a	LINE/L2	3018	3425	(1)	545184
1498	17.4	0.0	5.6	chr10	116120327	116120614	(17676808)	+	AluJr	SINE/Alu	39	310	(2)	548313
339	31.1	8.0	8.5	chr10	116120615	116121129	(17676293)	+	MamGypLTR3	LTR/Gypsy	436	946	(35)	548312
227	26.3	6.2	0.0	chr10	116682629	116682704	(17114718)	C	MIRc	SINE/MIR	(102)	166	86	549173
2230	4.0	0.0	5.0	chr10	116682706	116683002	(17114420)	C	AluYc	SINE/Alu	(17)	282	1	549174
497	24.1	31.4	4.1	chr10	118020415	118020809	(15776613)	+	LTR33	LTR/ERVL	11	515	(0)	551449
1932	10.1	1.7	5.5	chr10	119139252	119139558	(14657864)	+	AluSx3	SINE/Alu	1	295	(16)	553308
227	22.4	4.9	0.0	chr10	119139974	119140031	(14657391)	C	L2	LINE/L2	(1485)	1934	1874	553309
1781	16.0	3.0	1.7	chr10	119601988	119602280	(14195142)	+	AluSx1	SINE/Alu	2	298	(14)	554199
1043	25.6	9.4	12.7	chr10	119602281	119602434	(14194988)	C	L1ME3F	LINE/L1	(1125)	5021	4861	554194
1553	26.9	6.1	2.4	chr10	119602435	119602894	(14194528)	C	LTR16B1	LTR/ERVL	(0)	480	3	554200
1043	25.6	9.4	12.7	chr10	119602895	119603097	(14194325)	C	L1ME3F	LINE/L1	(1286)	4860	4647	554194
12	24.2	3.5	3.4	chr10	121975232	121975288	(11822134)	+	(GCGCCA)n	Simple_repeat	1	59	(0)	558056
256	11.4	0.0	0.0	chr10	122054015	122054049	(11743373)	C	MIRc	SINE/MIR	(114)	154	120	558228
214	30.9	1.8	0.0	chr10	122054020	122054074	(11743348)	C	MIR3	SINE/MIR	(62)	146	91	558229
436	25.4	9.2	6.3	chr10	122054168	122054356	(11743066)	C	MamGypLTR3	LTR/Gypsy	(213)	681	487	558230
328	25.3	2.4	3.5	chr10	122054470	122054555	(11742867)	C	MamGypLTR3	LTR/Gypsy	(593)	301	217	558230
525	32.0	4.3	9.6	chr10	122373796	122374117	(11423305)	+	L2b	LINE/L2	3072	3375	(0)	558775
13	14.0	4.7	4.4	chr10	122374765	122374807	(11422615)	+	(GCCGCG)n	Simple_repeat	1	45	(0)	558776
308	30.0	11.0	3.4	chr10	122565481	122565715	(11231707)	C	MamGypsy2-I	LTR/Gypsy	(3911)	255	1	559065
228	29.6	1.4	1.4	chr10	122565805	122565876	(11231546)	C	MamGypsy2-LTR	LTR/Gypsy	(103)	80	9	559065
362	32.9	1.3	5.6	chr10	122643627	122643787	(11153635)	+	MIRb	SINE/MIR	109	262	(6)	559137
136	8.0	1.0	1.0	chr10	122643995	122644196	(11153226)	+	(TGCTGCTG)n	Simple_repeat	1	204	(0)	559138
213	26.8	1.3	0.0	chr10	122644440	122644497	(11152925)	C	L2a	LINE/L2	(1)	3425	3325	559139
12	25.5	0.0	0.0	chr10	123137015	123137051	(10660371)	+	(TGTC)n	Simple_repeat	1	37	(0)	559852
15	13.7	4.5	4.3	chr10	123137228	123137271	(10660151)	+	(GCG)n	Simple_repeat	1	46	(0)	559853
13	25.8	0.0	0.0	chr10	123137598	123137634	(10659788)	+	(CGG)n	Simple_repeat	1	37	(0)	559854
2442	8.4	0.7	0.0	chr10	123991277	123991584	(9805838)	+	AluSz	SINE/Alu	1	310	(2)	561206
45	34.0	1.8	1.8	chr10	123991673	123991893	(9805529)	+	(GGC)n	Simple_repeat	1	225	(0)	561207
233	20.6	8.8	1.4	chr10	125146817	125146890	(8650532)	+	L2a	LINE/L2	3343	3422	(4)	563037
291	18.6	4.5	1.1	chr10	125934296	125934382	(7863040)	C	L1ME3D	LINE/L1	(219)	6023	5934	564236
186	27.4	7.3	0.0	chr10	125934629	125934679	(7862743)	C	MIRb	SINE/MIR	(9)	259	205	564237
40	0.0	0.0	0.0	chr10	125934725	125934761	(7862661)	+	(T)n	Simple_repeat	1	37	(0)	564238
234	24.6	1.7	0.0	chr10	125934781	125934837	(7862585)	C	MIRb	SINE/MIR	(177)	91	34	564237
382	30.5	6.6	5.8	chr10	125953745	125953896	(7843526)	+	MIRb	SINE/MIR	40	198	(70)	564260
3261	12.1	3.2	0.8	chr10	125953897	125954387	(7843035)	C	LTR10B	LTR/ERV1	(2)	503	1	564261
14010	14.3	3.8	1.4	chr10	125976923	125979342	(7818080)	C	L1PA14	LINE/L1	(4829)	3326	7	564299
18	24.7	1.4	4.1	chr10	126388067	126388138	(7409284)	+	G-rich	Low_complexity	1	73	(0)	564781
15	10.0	0.0	0.0	chr10	126388344	126388371	(7409051)	+	(GC)n	Simple_repeat	1	28	(0)	564782
451	36.5	1.6	2.3	chr10	126749591	126749848	(7047574)	+	MIRb	SINE/MIR	2	257	(11)	565269
332	21.5	0.0	10.6	chr10	128149649	128149752	(5647670)	+	Charlie8	DNA/hAT-Charlie	88	180	(2248)	567083
14	29.0	1.5	3.0	chr10	132586825	132586890	(1210532)	+	(GCGGC)n	Simple_repeat	1	67	(0)	571807
259	25.4	0.0	3.1	chr10	132587059	132587123	(1210299)	C	HAL1	LINE/L1	(365)	2142	2080	571808
11	17.6	5.0	2.4	chr10	133423035	133423074	(374348)	+	(AGGCGGC)n	Simple_repeat	1	42	(0)	572511
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
3202	14.2	5.9	1.4	chr11	189420	190371	(134896251)	C	TAR1	Satellite/telo	(1043)	995	1	573066
11	23.3	0.0	8.5	chr11	280635	280693	(134805929)	+	(GCGGCGC)n	Simple_repeat	1	59	(0)	573197
16	18.3	0.0	6.1	chr11	400482	400530	(134686092)	+	(GCCCCC)n	Simple_repeat	1	49	(0)	573354
2260	8.4	0.3	0.3	chr11	449670	449956	(134636666)	+	AluSg	SINE/Alu	3	289	(21)	573405
402	17.2	1.0	3.9	chr11	512802	512904	(134573718)	C	MER66B	LTR/ERV1	(0)	486	387	573484
931	16.4	0.6	0.0	chr11	512918	513076	(134573546)	+	MER66B	LTR/ERV1	152	311	(175)	573485
1987	8.8	2.0	7.5	chr11	513139	513457	(134573165)	C	AluSz	SINE/Alu	(10)	302	2	573486
2400	5.8	0.3	0.3	chr11	518188	518481	(134568141)	C	AluY	SINE/Alu	(17)	294	1	573498
936	9.4	3.0	0.0	chr11	518496	518622	(134568000)	C	AluSx3	SINE/Alu	(180)	131	1	573499
12	16.4	0.0	7.5	chr11	637192	637231	(134449391)	+	G-rich	Low_complexity	1	40	(0)	573670
21	19.4	6.1	3.5	chr11	639548	639629	(134446993)	+	(GCGCCC)n	Simple_repeat	1	87	(0)	573676
13	27.4	2.1	0.0	chr11	640324	640371	(134446251)	+	G-rich	Low_complexity	1	49	(0)	573677
12	19.4	4.7	2.2	chr11	1391352	1391394	(133695228)	+	G-rich	Low_complexity	1	45	(0)	574579
277	18.8	21.1	0.7	chr11	1515893	1516051	(133570571)	+	MIR	SINE/MIR	1	169	(61)	574678
254	22.0	0.0	0.0	chr11	1629106	1629155	(133457467)	+	MER53	DNA/hAT	143	192	(1)	574863
13	25.9	3.4	3.3	chr11	2270169	2270228	(132816394)	+	(CGC)n	Simple_repeat	1	60	(0)	575608
21	23.4	3.5	3.4	chr11	2270631	2270715	(132815907)	+	(CCCTCG)n	Simple_repeat	1	88	(0)	575609
12	11.1	6.9	0.0	chr11	2271046	2271074	(132815548)	+	(CACGCC)n	Simple_repeat	1	31	(0)	575610
16	31.8	1.5	0.0	chr11	2869661	2869726	(132216896)	+	(GGAC)n	Simple_repeat	1	67	(0)	576241
238	28.4	12.0	0.0	chr11	3092056	3092150	(131994472)	+	MIRc	SINE/MIR	47	154	(114)	576571
454	33.3	3.6	1.9	chr11	3195075	3195236	(131891386)	+	MIRb	SINE/MIR	102	266	(2)	576705
13	17.9	7.4	6.9	chr11	3667360	3667440	(131419182)	+	(AGC)n	Simple_repeat	1	87	(0)	577416
13	12.1	7.7	2.4	chr11	3855142	3855180	(131231442)	+	(GGAGCTG)n	Simple_repeat	1	42	(0)	577859
3594	14.6	3.1	1.0	chr11	4625373	4626429	(130460193)	C	HUERS-P3b-int	LTR/ERV1	(5394)	2024	742	578994
961	20.4	0.5	6.5	chr11	4626464	4626662	(130459960)	C	HUERS-P3b-int	LTR/ERV1	(6885)	533	347	578994
2687	14.2	6.9	5.3	chr11	4626663	4627200	(130459422)	C	LTR9	LTR/ERV1	(30)	582	1	578997
12	5.0	0.0	4.3	chr11	6282213	6282235	(128804387)	+	(TTGT)n	Simple_repeat	1	23	(0)	581067
2227	8.1	0.7	0.7	chr11	6282240	6282560	(128804062)	C	AluSq	SINE/Alu	(0)	313	1	581068
8908	25.6	4.5	2.5	chr11	6751255	6754463	(128332159)	C	MER66-int	LTR/ERV1	(3531)	4225	1210	581749
290	25.0	0.9	10.7	chr11	6754518	6754638	(128331984)	C	MER66B	LTR/ERV1	(84)	402	294	581750
901	20.3	1.1	1.1	chr11	6754637	6754815	(128331807)	C	MER66B	LTR/ERV1	(307)	179	1	581750
29	7.9	0.0	0.0	chr11	9091445	9091485	(125995137)	+	(CAG)n	Simple_repeat	1	41	(0)	584991
19	15.4	4.6	5.9	chr11	9091539	9091603	(125995019)	+	(GCG)n	Simple_repeat	1	68	(0)	584992
17	16.3	6.8	3.2	chr11	9091607	9091665	(125994957)	+	(CCCGGC)n	Simple_repeat	1	63	(0)	584993
15	27.5	3.1	5.0	chr11	9091819	9091914	(125994708)	+	(GCCCCGC)n	Simple_repeat	1	99	(0)	584994
2179	16.0	0.5	6.3	chr11	10314617	10315042	(124771580)	C	MER57B2	LTR/ERV1	(2)	401	1	587357
16	12.7	6.7	2.1	chr11	10792708	10792752	(124293870)	+	G-rich	Low_complexity	1	48	(0)	588141
283	30.6	19.7	0.8	chr11	10792941	10793203	(124293419)	C	L2	LINE/L2	(952)	2467	2143	588142
312	20.9	13.3	0.0	chr11	10934289	10934379	(124152243)	+	MamRep1879	DNA/hAT-Tip100?	13	117	(99)	588409
397	17.9	0.0	0.0	chr11	11231460	11231526	(123855096)	+	MamRep38	DNA/hAT	229	295	(0)	588854
18	20.3	0.0	5.4	chr11	13009690	13009745	(122076877)	+	(CGG)n	Simple_repeat	1	56	(0)	591660
16	8.5	0.0	0.0	chr11	13009782	13009806	(122076816)	+	(ACG)n	Simple_repeat	1	25	(0)	591661
21	6.6	0.0	0.0	chr11	13962709	13962740	(121123882)	+	(GCTCA)n	Simple_repeat	1	32	(0)	593101
17	9.4	2.8	2.7	chr11	13962952	13962987	(121123635)	+	(GCTGGC)n	Simple_repeat	1	37	(0)	593102
11	25.1	1.8	5.2	chr11	13963205	13963261	(121123361)	+	(CGCGGCG)n	Simple_repeat	1	58	(0)	593103
385	20.6	2.1	1.1	chr11	15074580	15074672	(120011950)	C	MIR3	SINE/MIR	(70)	138	45	594897
917	31.2	6.9	8.3	chr11	17932182	17932706	(117153916)	C	Tigger16a	DNA/TcMar-Tigger	(332)	625	114	599559
739	23.5	2.5	7.1	chr11	20386935	20387082	(114699540)	C	MIR	SINE/MIR	(102)	160	15	603847
1544	17.6	0.7	6.2	chr11	31515374	31515663	(103570959)	+	AluJo	SINE/Alu	9	282	(30)	620077
230	34.7	7.4	0.7	chr11	32288173	32288323	(102798299)	+	MER5B	DNA/hAT-Charlie	1	162	(16)	621315
2220	15.7	5.8	0.7	chr11	32288699	32289108	(102797514)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	621316
25	21.4	0.0	0.0	chr11	36309951	36310005	(98776617)	+	(CCA)n	Simple_repeat	1	55	(0)	628227
442	26.9	4.3	0.0	chr11	45293519	45293652	(89792970)	C	L1ME3A	LINE/L1	(4)	6169	6030	641829
2112	11.2	0.3	1.4	chr11	45293837	45294152	(89792470)	C	AluSx1	SINE/Alu	(0)	312	3	641830
491	27.7	2.2	5.3	chr11	46238837	46239023	(88847599)	C	MIR	SINE/MIR	(78)	184	4	643570
17	16.6	7.3	0.0	chr11	46347517	46347557	(88739065)	+	(GC)n	Simple_repeat	1	44	(0)	643816
319	20.8	16.4	4.6	chr11	46529633	46529790	(88556832)	C	Charlie8	DNA/hAT-Charlie	(2184)	244	50	644108
1590	10.3	9.3	0.0	chr11	47453904	47454126	(87632496)	C	AluSz	SINE/Alu	(66)	246	1	645950
195	29.8	0.0	5.0	chr11	47454190	47454249	(87632373)	+	L2c	LINE/L2	3292	3348	(39)	645951
460	27.4	7.9	7.9	chr11	47454286	47454442	(87632180)	C	MIR	SINE/MIR	(70)	192	27	645952
2210	11.0	0.0	1.9	chr11	47454443	47454750	(87631872)	C	AluSx	SINE/Alu	(10)	302	1	645953
12	16.9	2.9	2.8	chr11	47589841	47589875	(87496747)	+	G-rich	Low_complexity	1	36	(0)	646225
18	22.5	9.0	0.0	chr11	47590256	47590322	(87496300)	+	(GC)n	Simple_repeat	1	73	(0)	646226
261	31.6	4.9	1.3	chr11	57568015	57568171	(77518451)	C	MamRep1879	DNA/hAT-Tip100?	(49)	167	5	654006
398	29.4	3.0	10.8	chr11	57619500	57619589	(77467033)	C	MamGypLTR3a	LTR/Gypsy	(251)	730	647	654145
2209	14.2	0.3	0.0	chr11	57619590	57619891	(77466731)	C	AluSx1	SINE/Alu	(9)	303	1	654146
14	21.1	0.0	2.5	chr11	61509724	61509763	(73576859)	+	(GCCCCG)n	Simple_repeat	1	40	(0)	660336
18	30.6	2.4	1.2	chr11	61897618	61897699	(73188923)	+	G-rich	Low_complexity	1	84	(0)	661033
701	28.6	4.4	9.6	chr11	62310776	62311021	(72775601)	C	MLT1J	LTR/ERVL-MaLR	(72)	440	217	661812
2469	9.0	0.0	0.3	chr11	62311415	62311726	(72774896)	+	AluSq10	SINE/Alu	1	311	(2)	661814
2026	13.6	0.7	1.0	chr11	62424449	62424750	(72661872)	+	AluJo	SINE/Alu	1	301	(11)	662046
2169	7.1	0.3	5.9	chr11	62425007	62425329	(72661293)	+	AluSx	SINE/Alu	1	305	(7)	662047
1531	26.2	5.7	2.5	chr11	62621150	62621731	(72464891)	C	L2a	LINE/L2	(0)	3426	2828	662417
13	18.8	0.0	5.0	chr11	62621822	62621861	(72464761)	+	(CGCCC)n	Simple_repeat	1	40	(0)	662418
2176	14.4	4.9	0.5	chr11	63024344	63024756	(72061866)	+	L1MB4	LINE/L1	5748	6179	(1)	663332
916	25.4	11.7	4.6	chr11	63606467	63607213	(71479409)	C	L2a	LINE/L2	(147)	3279	2484	663989
12	15.8	0.0	3.3	chr11	63763345	63763374	(71323248)	+	G-rich	Low_complexity	1	30	(0)	664331
18	7.7	0.0	0.0	chr11	63763374	63763401	(71323221)	+	(CCGAC)n	Simple_repeat	1	28	(0)	664332
23	14.9	2.2	0.0	chr11	63763731	63763775	(71322847)	+	(CGG)n	Simple_repeat	1	46	(0)	664333
2384	8.7	1.0	0.6	chr11	64369010	64369320	(70717302)	+	AluSz6	SINE/Alu	1	312	(0)	665481
12	24.4	0.0	4.3	chr11	64369351	64369397	(70717225)	+	(GGCCGG)n	Simple_repeat	1	47	(0)	665482
12	29.7	3.2	1.5	chr11	64713287	64713349	(70373273)	+	(CGCGCGT)n	Simple_repeat	1	65	(0)	666089
18	23.7	0.0	3.5	chr11	64723067	64723124	(70363498)	+	(CCGC)n	Simple_repeat	1	58	(0)	666109
2508	8.5	0.0	0.0	chr11	65468467	65468772	(69617850)	+	AluSx1	SINE/Alu	1	306	(6)	667596
512	18.1	5.6	2.0	chr11	65468773	65468920	(69617702)	+	L1MD1	LINE/L1	7725	7840	(42)	667587
13	12.1	0.0	3.5	chr11	65469175	65469203	(69617419)	+	(TTTGG)n	Simple_repeat	1	29	(0)	667597
1291	12.3	2.7	21.9	chr11	65469206	65469374	(69617248)	C	AluJo	SINE/Alu	(11)	301	136	667598
2257	10.2	0.0	0.3	chr11	65469375	65469668	(69616954)	C	AluSq2	SINE/Alu	(19)	294	2	667599
17	27.2	0.0	5.5	chr11	65539064	65539136	(69547486)	+	(GGC)n	Simple_repeat	1	73	(0)	667738
12	15.7	2.6	5.0	chr11	65888566	65888604	(69198018)	+	G-rich	Low_complexity	1	40	(0)	668355
12	10.5	0.0	10.5	chr11	65890604	65890641	(69195981)	+	(GCCCC)n	Simple_repeat	1	38	(0)	668358
15	14.5	5.3	0.0	chr11	65890689	65890726	(69195896)	+	(CGGAGC)n	Simple_repeat	1	40	(0)	668359
13	15.9	2.6	5.0	chr11	65890858	65890896	(69195726)	+	(GCG)n	Simple_repeat	1	40	(0)	668360
12	18.5	0.0	9.6	chr11	66042820	66042871	(69043751)	+	(CGCGCCT)n	Simple_repeat	1	52	(0)	668718
15263	12.2	3.1	3.0	chr11	66123821	66123991	(68962631)	+	Tigger1	DNA/TcMar-Tigger	2225	2409	(9)	668872
193	22.4	3.9	0.0	chr11	66123994	66124042	(68962580)	+	L2b	LINE/L2	3257	3307	(80)	668871
387	34.1	6.8	5.3	chr11	66124039	66124341	(68962281)	C	L2b	LINE/L2	(43)	3332	3025	668875
927	8.1	0.8	0.0	chr11	66578898	66579020	(68507602)	C	AluSz6	SINE/Alu	(188)	124	1	669830
272	34.0	3.1	6.9	chr11	66579025	66579226	(68507396)	C	MamGypLTR3	LTR/Gypsy	(114)	780	587	669831
442	32.0	14.4	1.6	chr11	66579418	66579786	(68506836)	+	L2	LINE/L2	2395	2818	(601)	669832
2100	12.5	0.3	0.0	chr11	66579787	66580075	(68506547)	+	AluSx	SINE/Alu	1	290	(22)	669833
462	27.4	13.8	1.2	chr11	67411885	67412054	(67674568)	C	MER91A	DNA/hAT-Tip100	(0)	196	2	671591
5492	12.9	2.8	4.6	chr11	67572535	67573506	(67513116)	+	LTR13_	LTR/ERVK	1	954	(0)	671912
2143	13.2	0.0	3.1	chr11	67643705	67644022	(67442600)	+	AluSz	SINE/Alu	3	310	(2)	672023
330	24.6	11.0	0.8	chr11	67644319	67644449	(67442173)	+	MamGypLTR3a	LTR/Gypsy	836	981	(0)	672024
5815	12.9	2.5	2.3	chr11	67658910	67659904	(67426718)	C	LTR13	LTR/ERVK	(0)	1007	11	672054
305	19.0	3.7	0.0	chr11	67996506	67996584	(67090038)	+	MER53	DNA/hAT	111	192	(1)	672581
797	29.8	15.2	4.3	chr11	69950059	69950710	(65135912)	C	MamGypLTR3a	LTR/Gypsy	(60)	921	186	676007
657	33.0	7.5	6.4	chr11	70448586	70449035	(64637587)	+	L1MEd	LINE/L1	2	456	(6630)	676870
382	27.5	7.8	1.4	chr11	70449076	70449219	(64637403)	C	Tigger16a	DNA/TcMar-Tigger	(681)	276	123	676871
1170	14.5	2.4	2.0	chr11	70449285	70449510	(64637112)	+	L1MB5	LINE/L1	5935	6142	(32)	676872
2505	20.9	0.6	0.4	chr11	70796725	70797253	(64289369)	+	LTR73	LTR/ERV1	43	572	(0)	677380
2708	12.6	4.6	1.6	chr11	70942212	70942600	(64144022)	C	MSTB2	LTR/ERVL-MaLR	(62)	395	2	677603
477	23.7	2.2	5.1	chr11	70942601	70942616	(64144006)	+	MLT1A	LTR/ERVL-MaLR	452	462	(5)	677602
200	33.2	8.8	8.0	chr11	70942907	70943119	(64143503)	C	L2a	LINE/L2	(39)	3348	3134	677606
304	31.1	7.3	3.8	chr11	72414567	72414750	(62671872)	C	L2a	LINE/L2	(1)	3425	3235	679911
11705	9.8	1.1	0.7	chr11	73027035	73028659	(62057963)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	681042
485	25.0	19.0	1.5	chr11	73403940	73404134	(61682488)	+	MIRc	SINE/MIR	2	238	(30)	681757
248	30.9	11.5	1.4	chr11	73404306	73404446	(61682176)	+	MIRc	SINE/MIR	112	268	(0)	681758
206	25.9	13.8	1.2	chr11	73788257	73788338	(61298284)	+	MIR3	SINE/MIR	15	108	(100)	682676
545	24.9	7.0	6.1	chr11	74493875	74494088	(60592534)	C	L2a	LINE/L2	(5)	3421	3206	684202
553	30.1	6.7	1.3	chr11	75140721	75140946	(59945676)	+	MIRc	SINE/MIR	2	240	(28)	685403
193	32.8	5.7	0.0	chr11	75451380	75451495	(59635127)	C	MIRb	SINE/MIR	(104)	164	42	686070
187	22.6	5.4	0.0	chr11	76799162	76799214	(58287408)	+	MIRb	SINE/MIR	97	152	(116)	688698
415	25.9	12.1	1.5	chr11	76799631	76799763	(58286859)	+	MIRb	SINE/MIR	21	169	(99)	688699
365	25.9	9.4	0.7	chr11	78196031	78196183	(56890439)	C	MIRb	SINE/MIR	(24)	244	64	691584
13	20.2	4.3	2.0	chr11	78196737	78196783	(56889839)	+	(CTGCCG)n	Simple_repeat	1	49	(0)	691585
365	33.3	3.5	1.4	chr11	78715668	78715807	(56370815)	+	MIRc	SINE/MIR	95	237	(31)	692514
182	24.6	4.7	1.6	chr11	78715776	78715837	(56370785)	C	MIRc	SINE/MIR	(16)	252	189	692515
879	26.1	4.0	2.0	chr11	78715965	78716210	(56370412)	C	MIRb	SINE/MIR	(12)	256	6	692516
19129	14.3	0.4	0.6	chr11	85940994	85943742	(49142880)	+	HERVL18-int	LTR/ERVL	838	3580	(2467)	704661
1896	29.1	3.7	9.7	chr11	87336525	87337224	(47749398)	+	L1ME1	LINE/L1	11	666	(6201)	706993
4682	17.9	4.0	5.4	chr11	87337225	87338296	(47748326)	+	L1ME1	LINE/L1	1120	2175	(4692)	706993
933	27.7	6.8	3.6	chr11	88484643	88484998	(46601624)	C	L1P4d	LINE/L1	(5230)	1985	1618	708645
227	38.7	0.0	0.0	chr11	88484996	88485101	(46601521)	C	L1M2b	LINE/L1	(5723)	1486	1381	708646
1401	27.2	2.6	2.3	chr11	88485387	88486060	(46600562)	C	L1P4d	LINE/L1	(5824)	1111	21	708645
230	26.8	7.5	2.3	chr11	93330327	93330414	(41756208)	C	L2b	LINE/L2	(1)	3374	3282	715438
331	14.2	3.2	7.7	chr11	93330918	93331064	(41755558)	+	MIR	SINE/MIR	3	135	(133)	715439
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
1673	21.0	5.3	2.3	chr11	94325924	94326354	(40760268)	C	MER89	LTR/ERV1	(10)	549	6	716982
16	23.0	3.9	0.0	chr11	95089758	95089808	(39996814)	+	(CCCGC)n	Simple_repeat	1	53	(0)	718109
1797	27.4	8.1	7.0	chr11	95464512	95465974	(39620648)	C	L1M5	LINE/L1	(815)	5331	3852	718673
759	28.2	11.8	2.3	chr11	95465993	95466384	(39620238)	+	MLT1J2	LTR/ERVL-MaLR	5	438	(10)	718674
2442	7.6	0.0	0.7	chr11	96464110	96464411	(38622211)	C	AluSq2	SINE/Alu	(13)	300	1	720155
1208	20.0	2.4	0.0	chr11	102309637	102309876	(32776746)	+	Charlie5	DNA/hAT-Charlie	1378	1623	(1001)	727734
3530	12.0	5.9	0.7	chr11	102309879	102310441	(32776181)	+	LTR1	LTR/ERV1	184	777	(6)	727735
2617	8.4	0.0	0.0	chr11	102310443	102310752	(32775870)	C	AluSx4	SINE/Alu	(0)	310	1	727736
762	27.8	4.6	4.6	chr11	102390638	102390897	(32695725)	C	L1P4d	LINE/L1	(5337)	1878	1619	727862
8183	19.6	3.3	2.1	chr11	103325547	103327287	(31759335)	C	L1P4a	LINE/L1	(4728)	2057	288	729311
9996	17.1	1.4	1.4	chr11	111183202	111184852	(23901770)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	740992
27	3.4	0.0	0.0	chr11	111454821	111454850	(23631772)	+	(GGGTTGG)n	Simple_repeat	1	30	(0)	741407
15	11.3	4.1	3.9	chr11	118152814	118152857	(16933765)	+	G-rich	Low_complexity	1	44	(0)	752413
19	26.2	2.1	5.2	chr11	118152876	118152946	(16933676)	+	(GGAGCA)n	Simple_repeat	1	96	(0)	752414
19	18.3	1.9	3.7	chr11	118152901	118152953	(16933669)	+	GA-rich	Low_complexity	1	54	(0)	752415
12	0.0	4.3	4.2	chr11	118152947	118152969	(16933653)	+	(GAGC)n	Simple_repeat	1	24	(0)	752416
221	35.3	4.3	4.7	chr11	118997661	118997871	(16088751)	+	MIR	SINE/MIR	42	251	(11)	754056
2475	7.2	0.0	0.3	chr11	119321934	119322237	(15764385)	+	AluSc	SINE/Alu	1	303	(6)	754674
20	23.5	1.6	1.6	chr11	120240182	120240243	(14846379)	+	(GCGGCG)n	Simple_repeat	1	63	(0)	756205
305	21.1	0.0	1.4	chr11	123580541	123580612	(11506010)	+	MIR3	SINE/MIR	104	174	(34)	761825
4754	12.2	1.7	6.0	chr11	124069453	124070271	(11016351)	C	LTR1	LTR/ERV1	(0)	783	1	762508
13	18.0	0.0	7.0	chr11	125405102	125405144	(9681478)	+	(CCCA)n	Simple_repeat	1	43	(0)	764450
16541	15.2	3.4	1.0	chr11	128636580	128643447	(6443175)	+	L1PA16	LINE/L1	3	6866	(3)	769172
202	23.1	0.0	0.0	chr11	128643633	128643671	(6442951)	C	L2a	LINE/L2	(14)	3412	3374	769173
316	31.3	0.0	0.0	chr11	128860130	128860212	(6226410)	+	MIRb	SINE/MIR	124	206	(62)	769496
263	26.6	12.1	1.9	chr11	129287751	129287957	(5798665)	C	L1ME4a	LINE/L1	(77)	6047	5817	770092
3374	16.8	2.0	0.0	chr11	129418868	129419456	(5667166)	+	MER6A	DNA/TcMar-Tigger	1	601	(4)	770299
413	26.2	4.7	0.0	chr11	129618537	129618658	(5467964)	+	L2a	LINE/L2	3298	3425	(1)	770577
796	28.5	7.6	4.6	chr11	130033401	130033605	(5053017)	C	L1ME3E	LINE/L1	(63)	6179	5990	771231
270	28.6	4.2	1.1	chr11	130434390	130434481	(4652141)	C	L2c	LINE/L2	(34)	3353	3259	771914
23	16.6	6.6	0.0	chr11	130434673	130434733	(4651889)	+	(CTCG)n	Simple_repeat	1	65	(0)	771915
188	33.7	13.6	2.1	chr11	131695411	131695507	(3391115)	C	MIRb	SINE/MIR	(58)	210	101	773663
80	22.5	3.2	4.4	chr11	133082354	133082637	(2003985)	+	(CCCCCT)n	Simple_repeat	1	293	(0)	775452
34	8.0	1.8	1.8	chr11	133083111	133083165	(2003457)	+	(CA)n	Simple_repeat	1	56	(0)	775453
47	5.6	0.0	0.0	chr11	134051021	134051076	(1035546)	+	(TGCG)n	Simple_repeat	1	56	(0)	776716
848	17.6	1.5	0.0	chr11	134051263	134051393	(1035229)	C	FLAM_C	SINE/Alu	(8)	135	3	776717
16	13.6	4.8	2.3	chr11	134276845	134276886	(809736)	+	(GCCGC)n	Simple_repeat	1	44	(0)	777029
1921	15.7	21.1	1.1	chr11	135075695	135076563	(10059)	+	TAR1	Satellite/telo	1	1042	(938)	778016
66	0.0	0.0	0.0	chr11	135076564	135076622	(10000)	+	(GTTAGG)n	Simple_repeat	1	59	(0)	778017
4164	11.4	20.3	1.5	chr12	10587	11592	(133263717)	C	TAR1	Satellite/telo	(400)	1711	469	778085
1767	17.2	3.4	0.0	chr12	359471	359754	(132915555)	+	AluJb	SINE/Alu	2	295	(17)	778609
54	19.9	0.8	1.6	chr12	359755	359876	(132915433)	+	G-rich	Low_complexity	1	123	(0)	778610
855	21.4	1.1	0.0	chr12	576484	576656	(132698653)	C	AluJo	SINE/Alu	(1)	311	137	778993
240	30.7	13.8	3.3	chr12	1574029	1574227	(131701082)	C	L2c	LINE/L2	(382)	3005	2791	780898
381	23.1	4.2	0.0	chr12	1796021	1796111	(131479198)	C	MER94	DNA/hAT-Blackjack	(22)	112	18	781286
434	27.9	6.9	1.2	chr12	1796360	1796548	(131478761)	C	MIRb	SINE/MIR	(60)	202	4	781282
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
279	31.7	7.9	7.9	chr12	2813398	2813599	(130461710)	C	L2c	LINE/L2	(0)	3387	3186	782701
1004	22.5	3.2	2.4	chr12	3073260	3073505	(130201804)	+	MIR	SINE/MIR	13	260	(2)	783260
230	22.4	10.4	9.7	chr12	3203141	3203311	(130071998)	+	L2a	LINE/L2	3190	3426	(0)	783497
194	34.7	7.1	8.5	chr12	3207958	3208086	(130067223)	+	MIRb	SINE/MIR	107	233	(35)	783501
76	32.9	2.0	1.6	chr12	4251550	4251847	(129023462)	+	A-rich	Low_complexity	1	304	(0)	785234
765	28.6	3.8	0.4	chr12	4252219	4252446	(129022863)	+	MIRb	SINE/MIR	18	253	(15)	785235
1749	16.5	0.3	1.4	chr12	6279036	6279332	(126995977)	C	AluJb	SINE/Alu	(15)	297	4	788383
208	36.0	2.2	0.0	chr12	6953093	6953181	(126322128)	C	L3	LINE/CR1	(901)	3198	3108	789694
236	36.2	3.7	1.5	chr12	7995540	7995671	(125279638)	+	L2b	LINE/L2	3053	3187	(188)	791584
2376	9.7	1.3	0.0	chr12	10674473	10674780	(122600529)	+	AluSx1	SINE/Alu	1	312	(0)	795512
539	16.7	13.0	0.0	chr12	12985955	12986068	(120289241)	C	MER96	DNA/hAT-Tip100	(33)	142	12	799196
59	3.3	0.0	0.0	chr12	13000193	13000254	(120275055)	+	(GGCGGCAG)n	Simple_repeat	1	62	(0)	799225
15	12.1	3.9	7.4	chr12	13000268	13000319	(120274990)	+	(GGCAGA)n	Simple_repeat	1	54	(0)	799226
31	3.0	0.0	0.0	chr12	13000447	13000480	(120274829)	+	(GCAGCAGT)n	Simple_repeat	1	34	(0)	799227
826	29.6	12.4	1.0	chr12	13661640	13661939	(119613370)	C	MER102b	DNA/hAT-Charlie	(1)	340	2	800136
1880	16.6	6.2	12.0	chr12	15931619	15932103	(117343206)	+	MSTB2	LTR/ERVL-MaLR	1	455	(2)	803538
4959	23.2	5.6	2.2	chr12	16938467	16939992	(116335317)	C	L1PA15-16	LINE/L1	(3933)	2986	1603	804890
261	34.3	4.0	4.7	chr12	16940026	16940279	(116335030)	C	L1PA15-16	LINE/L1	(5325)	1594	1343	804890
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
1436	28.2	6.8	2.9	chr12	21169124	21169952	(112105357)	C	L1MB2	LINE/L1	(4516)	1787	777	810460
376	28.8	10.8	5.3	chr12	21170229	21170455	(112104854)	C	L1MB2	LINE/L1	(5650)	653	413	810460
1017	30.5	8.4	2.8	chr12	22443340	22443842	(110831467)	+	MamGypLTR3	LTR/Gypsy	348	881	(13)	812123
20461	11.1	4.2	1.4	chr12	25134950	25138181	(108137128)	+	L1PB1	LINE/L1	1	3486	(3376)	816030
25	19.7	0.0	2.0	chr12	26058512	26058562	(107216747)	+	(CA)n	Simple_repeat	1	51	(0)	817436
3812	19.7	7.8	5.2	chr12	26095965	26096967	(107178342)	+	MER45B	DNA/hAT-Tip100	2	1033	(7)	817498
18	4.8	0.0	0.0	chr12	26264787	26264808	(107010501)	+	(TC)n	Simple_repeat	1	22	(0)	817726
2747	27.4	7.1	3.9	chr12	26651112	26652409	(106622900)	C	L1MC4	LINE/L1	(4865)	1350	9	818285
201	22.6	19.2	0.0	chr12	26798197	26798301	(106477008)	+	MIR	SINE/MIR	19	149	(119)	818486
13	11.1	7.0	4.3	chr12	26798319	26798361	(106476948)	+	(GTTTCTCT)n	Simple_repeat	1	46	(0)	818487
768	8.1	11.5	0.0	chr12	27635626	27635748	(105639561)	+	MER85	DNA/PiggyBac	1	139	(0)	819890
6356	11.7	2.3	2.2	chr12	30850965	30851917	(102423392)	+	LTR13_	LTR/ERVK	1	954	(0)	824284
759	19.1	0.0	0.0	chr12	31561343	31561457	(101713852)	+	FLAM_A	SINE/Alu	1	115	(27)	825506
12	15.3	5.3	2.5	chr12	41188914	41188951	(92086358)	+	G-rich	Low_complexity	1	40	(0)	834730
562	26.5	0.6	6.1	chr12	41368087	41368310	(91906999)	C	MamGypLTR3	LTR/Gypsy	(178)	803	507	834964
36	6.7	0.0	0.0	chr12	42589509	42589555	(90685754)	+	(GCTGCGGG)n	Simple_repeat	1	47	(0)	836901
2360	10.3	0.0	1.9	chr12	43675956	43676266	(89599043)	+	AluSx1	SINE/Alu	5	309	(3)	838382
6273	20.3	2.2	1.6	chr12	43676375	43679139	(89596170)	+	L1PA15-16	LINE/L1	1603	4213	(2702)	838381
9159	17.2	2.1	0.7	chr12	45473173	45474800	(87800509)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	840848
1600	17.9	1.0	7.2	chr12	45722025	45722343	(87552966)	+	AluSz6	SINE/Alu	1	299	(13)	841274
220	32.6	9.4	2.9	chr12	47812744	47812882	(85462427)	C	MIRb	SINE/MIR	(116)	152	4	844235
31	25.4	2.9	4.9	chr12	48815413	48815551	(84459758)	+	GA-rich	Low_complexity	1	143	(0)	845854
21	16.4	0.0	0.0	chr12	48971629	48971669	(84303640)	+	G-rich	Low_complexity	1	41	(0)	846188
23	0.0	0.0	0.0	chr12	48971839	48971863	(84303446)	+	(GC)n	Simple_repeat	1	25	(0)	846189
43	0.0	0.0	0.0	chr12	48971864	48971900	(84303409)	+	(CA)n	Simple_repeat	1	37	(0)	846190
221	24.1	19.4	0.0	chr12	49347032	49347143	(83928166)	C	MIRb	SINE/MIR	(22)	186	48	847005
1358	25.1	14.5	7.7	chr12	49778146	49778629	(83496680)	+	L2	LINE/L2	268	788	(2631)	847788
1945	11.3	1.1	1.4	chr12	50039000	50039283	(83236026)	C	AluSz	SINE/Alu	(28)	284	2	848307
15	13.7	0.0	2.9	chr12	50057586	50057619	(83217690)	+	(CCCCT)n	Simple_repeat	1	34	(0)	848347
13	31.8	1.7	0.0	chr12	52122087	52122144	(81153165)	+	(CCCT)n	Simple_repeat	1	59	(0)	852464
14	12.8	5.9	0.0	chr12	52122245	52122278	(81153031)	+	(TGAAGG)n	Simple_repeat	1	36	(0)	852465
2082	13.1	0.0	2.9	chr12	53150564	53150875	(80124434)	+	AluSz	SINE/Alu	1	303	(9)	854163
2429	23.6	6.0	5.4	chr12	53150876	53150904	(80124405)	+	L1MC4	LINE/L1	7201	7224	(818)	854157
2352	17.4	5.5	1.5	chr12	53150905	53151370	(80123939)	C	MER66B	LTR/ERV1	(0)	486	1	854164
2429	23.6	6.0	5.4	chr12	53151371	53151947	(80123362)	+	L1MC4	LINE/L1	7225	7798	(244)	854157
17	24.4	0.0	4.8	chr12	53180926	53180988	(80094321)	+	G-rich	Low_complexity	1	63	(0)	854225
2115	11.7	2.0	0.0	chr12	53198121	53198418	(80076891)	C	AluSz	SINE/Alu	(3)	309	6	854240
17	22.0	2.3	0.0	chr12	54032808	54032851	(79242458)	+	(TCCC)n	Simple_repeat	1	45	(0)	855768
19	8.2	0.0	0.0	chr12	54191675	54191700	(79083609)	+	(T)n	Simple_repeat	1	26	(0)	856013
33	20.4	1.2	1.2	chr12	56601897	56601977	(76673332)	+	(CTGAGG)n	Simple_repeat	1	82	(0)	859886
16	15.4	2.8	0.0	chr12	57224992	57225027	(76050282)	+	(GGCCTG)n	Simple_repeat	1	37	(0)	860874
12	18.4	3.0	8.8	chr12	57737913	57737978	(75537331)	+	(GGCCGG)n	Simple_repeat	1	68	(0)	861767
19	20.2	0.0	2.1	chr12	57738120	57738166	(75537143)	+	(CGG)n	Simple_repeat	1	47	(0)	861768
5391	13.7	16.0	3.8	chr12	60269566	60270720	(73004589)	+	LTR12E	LTR/ERV1	1	1322	(0)	865132
4156	10.5	4.0	1.9	chr12	65557270	65557890	(67717419)	+	MER41B	LTR/ERV1	1	634	(0)	872961
1163	13.9	13.5	5.1	chr12	66103361	66103617	(67171692)	+	MLT1A1	LTR/ERVL-MaLR	127	408	(0)	873812
17	23.4	0.0	0.0	chr12	66235137	66235177	(67040132)	+	(TGC)n	Simple_repeat	1	41	(0)	874034
12	10.6	0.0	10.5	chr12	66235170	66235207	(67040102)	+	G-rich	Low_complexity	1	38	(0)	874035
2019	9.2	0.3	10.7	chr12	68613073	68613408	(64661901)	+	AluSz	SINE/Alu	1	301	(11)	877718
270	25.0	8.0	5.2	chr12	68613630	68613726	(64661583)	+	L2a	LINE/L2	3300	3399	(27)	877719
30	0.0	0.0	0.0	chr12	69557595	69557620	(63717689)	+	(TG)n	Simple_repeat	1	26	(0)	879511
15	0.0	0.0	0.0	chr12	69557621	69557637	(63717672)	+	(CG)n	Simple_repeat	1	17	(0)	879512
6027	23.9	7.7	4.3	chr12	70262973	70264941	(63010368)	C	L1M4b	LINE/L1	(4626)	2241	59	880639
39	30.6	0.7	2.1	chr12	72272612	72272754	(61002555)	+	GA-rich	Low_complexity	1	144	(0)	883613
10483	12.1	0.4	2.9	chr12	78112731	78114350	(55160959)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	891727
7974	14.1	1.8	1.6	chr12	83710382	83711646	(49563663)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	364	899374
5337	18.2	5.9	1.4	chr12	83823409	83824435	(49450874)	C	LTR28C	LTR/ERV1	(52)	1077	1	899520
21	26.4	0.0	0.0	chr12	98397806	98397831	(34877478)	+	(AATTG)n	Simple_repeat	1	26	(0)	922125
2271	8.6	0.3	0.7	chr12	98397832	98398123	(34877186)	+	AluSx	SINE/Alu	2	292	(20)	922126
18940	14.1	2.2	1.5	chr12	99618365	99625407	(33649902)	+	L1PA17	LINE/L1	2	6867	(2)	924133
559	30.1	1.1	0.6	chr12	101257993	101258166	(32017143)	C	MIR	SINE/MIR	(0)	262	88	926905
1120	17.7	1.0	2.5	chr12	101258178	101258380	(32016929)	+	MLT1J1	LTR/ERVL-MaLR	3	202	(242)	926906
83	7.8	3.5	2.7	chr12	101258417	101258561	(32016748)	+	(TTCT)n	Simple_repeat	1	150	(0)	926907
312	20.9	13.5	0.8	chr12	102816768	102816891	(30458418)	C	MIRc	SINE/MIR	(69)	161	7	929681
1582	24.6	15.3	1.8	chr12	102817060	102817833	(30457476)	C	Charlie2b	DNA/hAT-Charlie	(2)	2780	1884	929682
2209	23.5	8.8	1.1	chr12	103632211	103632822	(29642487)	C	LTR41B	LTR/ERVL	(9)	749	87	930979
192	23.6	8.3	5.2	chr12	103632891	103632948	(29642361)	+	MIR3	SINE/MIR	101	160	(48)	930980
18	0.0	0.0	0.0	chr12	105084231	105084253	(28191056)	+	(TTTG)n	Simple_repeat	1	23	(0)	933801
11	34.9	1.4	1.4	chr12	105084548	105084617	(28190692)	+	(GCCCGCC)n	Simple_repeat	1	71	(0)	933802
203	29.5	1.6	1.6	chr12	106224148	106224209	(27051100)	C	MIR3	SINE/MIR	(5)	203	142	935844
277	30.2	13.3	3.1	chr12	106282234	106282428	(26992881)	C	L1ME3G	LINE/L1	(298)	699	482	935962
252	28.4	2.4	4.7	chr12	106282510	106282594	(26992715)	+	Tigger16a	DNA/TcMar-Tigger	89	171	(786)	935963
278	35.0	8.0	1.9	chr12	106282629	106282927	(26992382)	+	L2b	LINE/L2	2741	3066	(353)	935964
12	10.9	0.0	8.6	chr12	109845494	109845528	(23429781)	+	(GGCGCA)n	Simple_repeat	1	35	(0)	943463
2412	8.1	0.0	0.0	chr12	109927291	109927598	(23347711)	+	AluSg	SINE/Alu	1	308	(2)	943651
7085	11.7	5.4	4.9	chr12	109927599	109927722	(23347587)	+	MER52C	LTR/ERV1	1153	1277	(1)	943650
352	31.2	1.9	7.2	chr12	109927804	109927929	(23347380)	+	MIRb	SINE/MIR	96	222	(46)	943652
2325	9.3	0.3	1.3	chr12	110469496	110469808	(22805501)	C	AluSx1	SINE/Alu	(2)	310	1	944813
1157	23.3	4.8	14.1	chr12	110937467	110937764	(22337545)	C	L2a	LINE/L2	(1)	3425	3182	945948
193	19.1	6.7	0.0	chr12	111049995	111050036	(22225273)	C	MIRc	SINE/MIR	(120)	148	104	946210
644	31.4	11.2	4.3	chr12	111050173	111050815	(22224494)	+	L2b	LINE/L2	2118	2810	(609)	946211
916	31.4	8.5	11.7	chr12	111304479	111305246	(21970063)	C	MamGypLTR3a	LTR/Gypsy	(2)	979	239	946756
479	29.8	13.0	1.1	chr12	111425350	111425672	(21849637)	C	L2b	LINE/L2	(165)	3210	2832	947075
2283	9.3	0.0	0.7	chr12	114637457	114637747	(18637562)	+	AluSx1	SINE/Alu	1	289	(23)	954161
31	3.0	0.0	0.0	chr12	114692488	114692521	(18582788)	+	(GGCGC)n	Simple_repeat	1	34	(0)	954278
2402	15.4	6.8	1.7	chr12	116506314	116506774	(16768535)	+	MER66B	LTR/ERV1	1	486	(0)	958239
760	9.5	0.0	0.9	chr12	116703185	116703289	(16572020)	+	AluSx3	SINE/Alu	205	308	(3)	958736
14504	9.8	2.2	0.5	chr12	116756445	116760863	(16514446)	C	L1PB1	LINE/L1	(2110)	4752	252	958850
2113	10.7	0.0	2.0	chr12	117854009	117854306	(15421003)	C	AluJo	SINE/Alu	(20)	292	1	961220
644	31.5	7.8	5.0	chr12	117854525	117854862	(15420447)	+	MamGypLTR3a	LTR/Gypsy	632	979	(2)	961218
185	19.3	0.0	0.0	chr12	119301395	119301437	(13973872)	C	MIRc	SINE/MIR	(95)	173	128	964453
369	29.3	2.6	15.6	chr12	119301533	119301756	(13973553)	+	MIRb	SINE/MIR	7	202	(66)	964456
2133	11.9	0.7	0.0	chr12	119301757	119302041	(13973268)	+	AluSz	SINE/Alu	1	287	(25)	964457
8457	5.6	0.5	0.1	chr12	120335312	120336314	(12938995)	+	LTR13	LTR/ERVK	1	1007	(0)	966776
20	10.8	5.0	0.0	chr12	121580570	121580609	(11694700)	+	G-rich	Low_complexity	1	42	(0)	969721
13	26.2	1.7	3.4	chr12	121626548	121626605	(11648704)	+	G-rich	Low_complexity	1	59	(0)	969869
1253	25.1	4.2	3.6	chr12	121770110	121770465	(11504844)	C	MLT1B	LTR/ERVL-MaLR	(29)	361	4	970298
18	4.7	0.0	0.0	chr12	122024456	122024477	(11250832)	+	(T)n	Simple_repeat	1	22	(0)	970926
846	12.4	2.8	8.3	chr12	122024652	122024844	(11250465)	+	MER53	DNA/hAT	1	182	(11)	970927
302	29.4	3.9	3.3	chr12	122335931	122336081	(10939228)	C	Tigger16a	DNA/TcMar-Tigger	(413)	544	393	971576
13	4.3	3.9	3.7	chr12	122336165	122336190	(10939119)	+	(TTAAT)n	Simple_repeat	1	27	(0)	971577
18	0.0	0.0	0.0	chr12	122336414	122336433	(10938876)	+	(A)n	Simple_repeat	1	20	(0)	971578
183	20.0	0.0	2.4	chr12	123088973	123089013	(10186296)	+	MIRb	SINE/MIR	226	265	(3)	973284
232	25.0	0.0	1.6	chr12	123089050	123089110	(10186199)	+	L2c	LINE/L2	3326	3385	(2)	973290
203	36.4	3.3	4.1	chr12	124469018	124469140	(8806169)	C	MIR	SINE/MIR	(55)	207	86	976107
506	29.4	4.1	2.1	chr12	124469593	124469783	(8805526)	+	MIRb	SINE/MIR	52	246	(22)	976108
2529	19.4	8.3	6.0	chr12	124469787	124469883	(8805426)	+	L1MB5	LINE/L1	5418	5497	(677)	976109
367	30.8	2.9	4.3	chr12	124766900	124767106	(8508203)	C	MamRep4096	DNA/hAT-Tip100	(220)	206	3	976784
192	27.2	6.6	0.9	chr12	124767272	124767377	(8507932)	C	L2b	LINE/L2	(0)	3387	3241	976785
183	25.9	3.6	0.0	chr12	124767412	124767465	(8507844)	+	MIR1_Amn	SINE/MIR	94	149	(81)	976786
1687	18.0	11.3	6.3	chr12	124920772	124921198	(8354111)	+	LTR47A	LTR/ERVL	2	452	(0)	977151
615	5.6	0.0	0.0	chr12	124921755	124921826	(8353483)	C	tRNA-Ala-GCG	tRNA	(3)	72	1	977152
659	0.0	0.0	0.0	chr12	124939647	124939718	(8335591)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	977200
587	8.3	0.0	0.0	chr12	124939966	124940037	(8335272)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	977201
994	13.2	7.2	11.8	chr12	125330740	125330943	(7944366)	+	AluJr4	SINE/Alu	1	194	(118)	978051
512	28.9	7.5	1.5	chr12	126139521	126139720	(7135589)	+	MamGypLTR3	LTR/Gypsy	578	790	(104)	979334
1856	4.6	4.2	0.2	chr12	127165908	127166171	(6109138)	C	LSU-rRNA_Hsa	rRNA	(1)	5034	4720	981018
134	1.9	3.0	2.3	chr12	127166172	127166337	(6108972)	+	(CCGAGGCCGA)n	Simple_repeat	1	171	(0)	981019
2041	17.6	7.8	0.0	chr12	129162497	129162889	(4112420)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	984587
673	31.3	5.8	3.3	chr12	129162904	129163240	(4112069)	+	MamGypLTR3	LTR/Gypsy	539	884	(10)	984588
424	27.7	0.0	0.0	chr12	130149519	130149612	(3125697)	+	MLT1K	LTR/ERVL-MaLR	169	262	(333)	986277
1440	17.7	5.1	1.0	chr12	131609361	131609663	(1665646)	C	L1PB3	LINE/L1	(0)	6154	5839	988336
794	21.3	6.0	2.2	chr12	132193749	132194121	(1081188)	C	MSTB1	LTR/ERVL-MaLR	(10)	422	1	989197
443	27.8	9.2	7.7	chr12	132194122	132194470	(1080839)	+	MamGypLTR3a	LTR/Gypsy	555	862	(119)	989198
79	35.9	0.4	0.0	chr12	132284064	132284327	(990982)	+	(CA)n	Simple_repeat	1	265	(0)	989295
614	31.9	1.2	1.2	chr12	132284369	132284612	(990697)	C	MER113	DNA/hAT-Charlie	(4)	517	274	989296
11	14.5	7.5	2.3	chr12	132710536	132710575	(564734)	+	(CTCCGGC)n	Simple_repeat	1	43	(0)	989824
1611	23.9	9.7	6.4	chr12	132955038	132955650	(319659)	C	MER92B	LTR/ERV1	(0)	636	1	990229
6716	10.2	0.9	2.0	chr12	132963830	132964793	(310516)	+	LTR13_	LTR/ERVK	1	954	(0)	990255
13	22.5	0.0	0.0	chr12	133236238	133236273	(39036)	+	(CGGCGC)n	Simple_repeat	1	36	(0)	990728
346	19.5	16.8	5.7	chr12	133264050	133264207	(11102)	C	L1MC	LINE/L1	(2239)	5546	5368	990764
2247	19.0	7.7	1.5	chr12	133264212	133264745	(10564)	+	TAR1	Satellite/telo	1499	2068	(43)	990766
728	16.0	6.0	3.4	chr13	20392371	20394411	(93969917)	+	(CA)n	Simple_repeat	1	2164	(0)	994197
180	22.7	0.0	0.0	chr13	23578483	23578526	(90785802)	C	L2a	LINE/L2	(0)	3426	3383	999058
375	28.9	6.7	2.8	chr13	23876293	23876433	(90487895)	C	MIRb	SINE/MIR	(36)	232	84	999469
335	32.0	8.0	7.5	chr13	23876508	23876855	(90487473)	C	L1ME4a	LINE/L1	(767)	5379	5030	999468
2049	20.1	9.3	2.4	chr13	24232026	24232493	(90131835)	C	MLT2B2	LTR/ERVL	(3)	512	9	999996
585	27.7	11.6	4.0	chr13	24232499	24232547	(90131781)	C	L1MB7	LINE/L1	(912)	5234	5187	999995
1955	15.3	0.0	2.3	chr13	24232548	24232848	(90131480)	C	AluJb	SINE/Alu	(18)	294	1	999997
585	27.7	11.6	4.0	chr13	24232849	24233125	(90131203)	C	L1MB7	LINE/L1	(960)	5186	4880	999995
2207	12.2	0.0	1.0	chr13	27481447	27481758	(86882570)	C	AluSx3	SINE/Alu	(2)	309	1	1005025
391	35.6	9.8	7.3	chr13	27481766	27482577	(86881751)	C	MamGypLTR3a	LTR/Gypsy	(60)	921	87	1005026
23	7.9	2.4	2.3	chr13	27978531	27978572	(86385756)	+	(CCGCC)n	Simple_repeat	1	43	(0)	1005838
15	30.5	0.0	0.0	chr13	28138601	28138652	(86225676)	+	(GGC)n	Simple_repeat	1	52	(0)	1006218
15	19.9	2.5	0.0	chr13	28138675	28138714	(86225614)	+	(CCTCCC)n	Simple_repeat	1	41	(0)	1006219
21	23.2	1.6	1.6	chr13	28138720	28138781	(86225547)	+	(GGC)n	Simple_repeat	1	63	(0)	1006220
254	35.5	1.4	6.0	chr13	28274062	28274211	(86090117)	+	Tigger16a	DNA/TcMar-Tigger	83	225	(732)	1006477
1071	34.2	1.1	0.8	chr13	28804889	28805248	(85559080)	+	LTR16E2	LTR/ERVL	7	367	(201)	1007356
421	20.1	2.7	3.2	chr13	28805331	28805453	(85558875)	C	SVA_F	Retroposon/SVA	(823)	552	457	1007357
443	28.6	4.8	8.0	chr13	28805450	28805688	(85558640)	+	LTR16E2	LTR/ERVL	338	568	(0)	1007356
88	6.3	0.8	0.8	chr13	28819717	28819833	(85544495)	+	(GGCTGG)n	Simple_repeat	1	118	(0)	1007379
660	23.0	9.1	5.7	chr13	30879361	30879572	(83484756)	+	MIR	SINE/MIR	43	262	(0)	1010531
24	23.2	5.3	2.0	chr13	31199925	31200018	(83164310)	+	(GGC)n	Simple_repeat	1	99	(0)	1011022
21	24.9	3.2	4.2	chr13	31200242	31200334	(83163994)	+	(GCGCC)n	Simple_repeat	1	96	(0)	1011023
13	22.0	2.0	3.9	chr13	31200559	31200609	(83163719)	+	(CCCGCCC)n	Simple_repeat	1	52	(0)	1011024
1912	22.9	5.0	6.8	chr13	31352215	31352908	(83011420)	C	L1PA17	LINE/L1	(6068)	805	125	1011187
21	16.8	3.6	1.8	chr13	33016340	33016394	(81347934)	+	G-rich	Low_complexity	1	57	(0)	1013706
1636	20.1	3.4	6.9	chr13	36420522	36421070	(77943258)	C	LTR55	LTR/ERVL?	(19)	529	1	1018526
458	30.4	5.3	8.0	chr13	37304956	37305205	(77059123)	C	MLT1J	LTR/ERVL-MaLR	(42)	470	228	1019822
1413	12.0	18.4	2.4	chr13	37305264	37305513	(77058815)	C	AluJb	SINE/Alu	(13)	299	1	1019823
578	28.0	7.2	2.0	chr13	37305516	37305712	(77058616)	C	MLT1J	LTR/ERVL-MaLR	(297)	215	8	1019822
417	31.5	7.8	7.5	chr13	40274272	40274566	(74089762)	C	L2b	LINE/L2	(0)	3375	3080	1023834
1324	18.1	3.2	1.2	chr13	44457022	44457262	(69907066)	+	Tigger9b	DNA/TcMar-Tigger	1	246	(378)	1030328
348	24.8	8.5	7.2	chr13	44877088	44877226	(69487102)	+	MamGypLTR3a	LTR/Gypsy	684	824	(157)	1031119
1968	6.8	11.3	1.4	chr13	44877410	44877688	(69486640)	+	AluYh3	SINE/Alu	1	310	(1)	1031120
267	13.3	9.4	0.0	chr13	45473646	45473702	(68890626)	C	MIRb	SINE/MIR	(3)	259	197	1032373
1069	26.6	10.6	0.8	chr13	45473783	45474130	(68890198)	C	LTR86A1	LTR/ERVL	(130)	383	1	1032374
2960	16.8	2.0	3.0	chr13	45737514	45738077	(68626251)	C	MER74A	LTR/ERVL	(0)	558	1	1032760
23	20.5	4.4	4.2	chr13	49220073	49220163	(65144165)	+	G-rich	Low_complexity	1	95	(0)	1037997
14	23.7	1.9	3.6	chr13	49220195	49220248	(65144080)	+	(GCGCA)n	Simple_repeat	1	55	(0)	1037998
6089	13.0	19.3	0.2	chr13	49677766	49678834	(64685494)	C	LTR12E	LTR/ERV1	(0)	1322	1	1038833
227	8.6	0.0	2.8	chr13	50357865	50357900	(64006428)	C	LTR27	LTR/ERV1	(104)	532	498	1040004
21	23.8	0.0	5.3	chr13	52450369	52450444	(61913884)	+	(GCCGG)n	Simple_repeat	1	76	(0)	1043131
13	22.1	4.1	2.0	chr13	52652663	52652711	(61711617)	+	G-rich	Low_complexity	1	51	(0)	1043445
63	0.0	0.0	0.0	chr13	52897652	52897707	(61466621)	+	(CTTT)n	Simple_repeat	1	56	(0)	1043856
2374	8.2	0.7	0.0	chr13	52897708	52898000	(61466328)	C	AluSx4	SINE/Alu	(14)	296	2	1043857
6941	11.0	20.6	0.6	chr13	58858152	58859412	(55504916)	C	LTR12C	LTR/ERV1	(0)	1579	1	1051288
434	27.8	14.2	2.1	chr13	60627287	60627477	(53736851)	+	MIRb	SINE/MIR	5	222	(46)	1053790
2483	6.0	0.0	0.0	chr13	62394077	62394384	(51969944)	C	AluY	SINE/Alu	(0)	311	1	1055954
4315	20.8	5.4	6.6	chr13	62394385	62395296	(51969032)	+	LTR27E	LTR/ERV1	151	1076	(1)	1055953
10825	9.2	1.6	0.4	chr13	63305560	63307116	(51057212)	+	LTR12C	LTR/ERV1	3	1579	(0)	1057084
257	27.3	11.5	1.8	chr13	65034257	65034420	(49329908)	C	MER52A	LTR/ERV1	(2)	1753	1572	1059252
2610	26.1	6.0	2.4	chr13	65034755	65035852	(49328476)	C	L1MC3	LINE/L1	(641)	2356	850	1059244
2337	9.5	0.0	0.0	chr13	65149206	65149488	(49214840)	+	AluSx1	SINE/Alu	1	283	(29)	1059400
26	0.0	0.0	0.0	chr13	65149489	65149513	(49214815)	+	(AAAC)n	Simple_repeat	1	25	(0)	1059401
265	21.1	0.0	1.7	chr13	65149612	65149669	(49214659)	+	MLT1B	LTR/ERVL-MaLR	1	57	(333)	1059402
2128	11.5	7.7	0.2	chr13	65149669	65150113	(49214215)	C	LTR12C	LTR/ERV1	(1096)	483	3	1059403
292	21.1	0.0	0.0	chr13	65150154	65150205	(49214123)	C	LTR40c	LTR/ERVL	(253)	212	161	1059404
6113	15.9	0.5	0.7	chr13	65926675	65927645	(48436683)	C	LTR1D	LTR/ERV1	(0)	975	7	1060398
8356	6.7	18.6	0.2	chr13	66560883	66562168	(47802160)	+	LTR12C	LTR/ERV1	3	1579	(0)	1061194
695	31.8	9.1	3.1	chr13	66973637	66974279	(47390049)	C	Charlie7	DNA/hAT-Charlie	(1927)	685	1	1061696
3614	17.5	17.8	5.7	chr13	67415684	67416618	(46947710)	+	LTR27E	LTR/ERV1	1	1073	(4)	1062246
490	28.1	11.6	4.8	chr13	67416619	67416874	(46947454)	+	L1MEi	LINE/L1	1108	1390	(822)	1062245
6966	10.5	0.9	0.2	chr13	68107248	68108279	(46256049)	C	LTR12C	LTR/ERV1	(538)	1041	3	1063108
1863	16.9	3.3	1.9	chr13	68108280	68108604	(46255724)	C	THE1B	LTR/ERVL-MaLR	(34)	330	1	1063109
7865	7.0	19.8	0.2	chr13	68170797	68172063	(46192265)	+	LTR12C	LTR/ERV1	3	1579	(0)	1063192
1461	22.8	1.7	1.0	chr13	68927380	68927677	(45436651)	+	AluJr	SINE/Alu	2	301	(11)	1064147
4710	13.1	0.9	7.0	chr13	69404098	69404937	(44959391)	+	LTR1A2	LTR/ERV1	50	837	(0)	1064738
10389	6.2	7.3	0.1	chr13	70511008	70512471	(43851857)	C	LTR12C	LTR/ERV1	(0)	1579	2	1066231
4611	19.4	1.8	0.3	chr13	72692575	72693422	(41670906)	+	MST-int	LTR/ERVL-MaLR	213	1072	(579)	1069182
1663	23.8	11.2	5.3	chr13	73316836	73317610	(41046718)	+	HAL1	LINE/L1	1350	2176	(331)	1070364
19	29.1	0.0	0.0	chr13	74306903	74306956	(40057372)	+	(TC)n	Simple_repeat	1	54	(0)	1071788
321	33.2	10.7	2.1	chr13	74573412	74573599	(39790729)	C	MIRb	SINE/MIR	(18)	250	45	1072125
9653	13.4	4.6	0.3	chr13	74610004	74611515	(39752813)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	1072180
10140	7.6	7.6	0.3	chr13	74718212	74719669	(39644659)	+	LTR12C	LTR/ERV1	5	1577	(2)	1072330
351	35.8	2.2	3.6	chr13	75548680	75548818	(38815510)	C	L2b	LINE/L2	(3)	3372	3236	1073542
211	35.2	7.9	2.0	chr13	75548971	75549173	(38815155)	+	L2c	LINE/L2	3080	3295	(92)	1073543
2514	15.7	7.3	1.1	chr13	76472916	76473379	(37890949)	+	LOR1a	LTR/ERV1	3	497	(0)	1074785
1215	6.7	0.0	0.0	chr13	76979902	76980051	(37384277)	+	L1PA8	LINE/L1	6007	6156	(16)	1075543
26	0.0	0.0	3.3	chr13	76980053	76980082	(37384246)	+	(AAAAT)n	Simple_repeat	1	30	(0)	1075544
19	11.6	0.0	0.0	chr13	78382016	78382062	(35982266)	+	(GC)n	Simple_repeat	1	47	(0)	1077449
33	0.0	0.0	0.0	chr13	78382063	78382090	(35982238)	+	(CA)n	Simple_repeat	1	28	(0)	1077450
82	33.7	1.3	1.9	chr13	78601915	78602288	(35762040)	+	(CCG)n	Simple_repeat	1	379	(0)	1077760
6052	16.4	10.8	4.2	chr13	79431893	79433364	(34930964)	+	MER52A	LTR/ERV1	10	1726	(29)	1078915
18	10.5	0.0	0.0	chr13	79481622	79481652	(34882676)	+	(TTTGT)n	Simple_repeat	1	31	(0)	1079007
17	13.1	0.0	0.0	chr13	79492253	79492278	(34872050)	+	(T)n	Simple_repeat	1	26	(0)	1079033
1523	17.3	7.1	1.1	chr13	79492409	79492685	(34871643)	C	AluJr	SINE/Alu	(17)	295	1	1079034
9360	9.8	9.5	0.6	chr13	80277752	80279185	(34085143)	C	LTR12C	LTR/ERV1	(1)	1578	3	1080079
1760	11.3	0.0	12.3	chr13	80279186	80279494	(34084834)	+	AluSx1	SINE/Alu	31	301	(11)	1080080
10568	6.8	10.9	0.1	chr13	80355363	80356770	(34007558)	+	LTR12C	LTR/ERV1	2	1579	(0)	1080232
20724	15.8	4.4	2.1	chr13	80405664	80408819	(33955509)	C	L1PA14	LINE/L1	(3952)	4203	102	1080309
9571	6.6	12.6	0.4	chr13	80489743	80491127	(33873201)	C	LTR12C	LTR/ERV1	(0)	1579	2	1080406
44	2.4	0.0	0.0	chr13	84705190	84705231	(29659097)	+	(TG)n	Simple_repeat	1	42	(0)	1085591
16	5.3	0.0	0.0	chr13	84705232	84705251	(29659077)	+	(CG)n	Simple_repeat	1	20	(0)	1085592
697	32.6	4.5	4.2	chr13	84831384	84831716	(29532612)	+	L1MB7	LINE/L1	23	356	(7161)	1085750
961	26.7	1.2	10.2	chr13	84831722	84832171	(29532157)	+	MER52D	LTR/ERV1	475	883	(1240)	1085751
2352	21.3	2.1	0.4	chr13	84832220	84832685	(29531643)	+	LTR2752	LTR/ERV1	790	1263	(0)	1085752
17836	5.5	0.4	0.1	chr13	84869737	84871933	(29492395)	+	HERVK14C-int	LTR/ERVK	1	2202	(5232)	1085796
35931	6.4	0.6	0.5	chr13	84871940	84873636	(29490692)	+	HERVK14C-int	LTR/ERVK	2633	4377	(3057)	1085796
2006	17.6	3.1	13.4	chr13	85041007	85041255	(29323073)	C	MER66B	LTR/ERV1	(0)	486	282	1086014
2460	9.9	0.0	0.0	chr13	85041256	85041568	(29322760)	C	AluSq10	SINE/Alu	(0)	313	1	1086015
7364	12.9	13.9	3.2	chr13	85204732	85206134	(29158194)	+	LTR12C	LTR/ERV1	3	1579	(0)	1086229
4474	16.7	1.8	2.2	chr13	87792982	87793802	(26570526)	C	LTR1B1	LTR/ERV1	(0)	818	1	1089480
5583	7.4	1.3	0.4	chr13	88705800	88706558	(25657770)	C	MER4E	LTR/ERV1	(0)	766	1	1090655
8035	18.1	3.9	4.5	chr13	89033474	89035114	(25329214)	+	MSTA-int	LTR/ERVL-MaLR	2	1631	(0)	1091067
9729	7.3	9.2	0.8	chr13	89882946	89884388	(24479940)	C	LTR12C	LTR/ERV1	(0)	1579	3	1092225
244	34.8	0.0	1.1	chr13	89884547	89884639	(24479689)	+	L2	LINE/L2	2827	2918	(501)	1092226
244	33.3	3.9	1.0	chr13	90800429	90800528	(23563800)	+	LTR33C	LTR/ERVL	40	142	(487)	1093406
1146	28.7	2.6	1.8	chr13	91647424	91647881	(22716447)	+	LTR16B2	LTR/ERVL	1	462	(0)	1094544
2207	19.9	0.8	6.0	chr13	91714772	91715284	(22649044)	C	MER66B	LTR/ERV1	(0)	486	1	1094648
2743	25.9	5.3	5.4	chr13	93171354	93172572	(21191756)	C	L1MC4	LINE/L1	(128)	7914	6698	1096539
310	35.4	5.5	3.1	chr13	94192145	94192430	(20171898)	C	AmnSINE1	SINE/5S-Deu-L2	(68)	507	215	1097938
238	24.1	1.8	0.0	chr13	94192447	94192500	(20171828)	C	AmnSINE1	SINE/5S-Deu-L2	(395)	180	126	1097939
42	0.0	0.0	0.0	chr13	94193063	94193098	(20171230)	+	(GT)n	Simple_repeat	1	36	(0)	1097940
19	11.7	0.0	0.0	chr13	94416415	94416442	(19947886)	+	(A)n	Simple_repeat	1	28	(0)	1098260
22	24.6	1.4	1.4	chr13	94711389	94711458	(19652870)	+	(CCGCGG)n	Simple_repeat	1	70	(0)	1098774
31	5.6	0.0	0.0	chr13	94711553	94711590	(19652738)	+	(GCG)n	Simple_repeat	1	38	(0)	1098775
2188	10.3	0.0	0.4	chr13	95479069	95479349	(18884979)	+	AluSg	SINE/Alu	1	280	(30)	1100192
13	13.4	6.1	0.0	chr13	97141833	97141865	(17222463)	+	(CAGAGG)n	Simple_repeat	1	35	(0)	1102578
12	12.8	5.6	2.6	chr13	98142495	98142530	(16221798)	+	G-rich	Low_complexity	1	38	(0)	1104172
14	14.3	8.3	1.9	chr13	98142728	98142775	(16221553)	+	(CCCGCTCT)n	Simple_repeat	1	52	(0)	1104173
17	10.8	7.5	0.0	chr13	98142939	98142978	(16221350)	+	(CGGAG)n	Simple_repeat	1	43	(0)	1104174
15	19.9	4.8	4.5	chr13	98143122	98143184	(16221144)	+	(GGCGG)n	Simple_repeat	1	66	(0)	1104175
12	13.9	0.0	0.0	chr13	99614817	99614840	(14749488)	+	(TCCC)n	Simple_repeat	1	24	(0)	1106555
12	15.3	5.3	2.5	chr13	100588762	100588799	(13775529)	+	G-rich	Low_complexity	1	40	(0)	1108183
61	1.7	0.0	0.0	chr13	106917584	106917642	(7446686)	+	(CGGGGC)n	Simple_repeat	1	59	(0)	1116728
27	32.5	0.0	3.9	chr13	106917697	106917824	(7446504)	+	G-rich	Low_complexity	1	128	(0)	1116729
38	28.9	3.2	3.1	chr13	112068084	112068269	(2296059)	+	(GGCGGC)n	Simple_repeat	1	192	(0)	1123127
30	5.3	10.2	0.0	chr13	112068323	112068381	(2295947)	+	(CGCACC)n	Simple_repeat	1	65	(0)	1123128
29	24.5	1.1	3.2	chr13	112068492	112068583	(2295745)	+	(CGG)n	Simple_repeat	1	93	(0)	1123129
17	26.1	3.4	0.0	chr13	112068705	112068802	(2295526)	+	(CGG)n	Simple_repeat	1	101	(0)	1123130
14	10.3	0.0	8.1	chr13	112068881	112068917	(2295411)	+	(CGGCC)n	Simple_repeat	1	37	(0)	1123131
505	30.5	6.9	2.6	chr13	112942612	112942762	(1421566)	C	MER20B	DNA/hAT-Charlie	(426)	357	202	1124074
237	24.5	8.2	2.9	chr13	113111331	113112657	(1251671)	+	(CACCTCA)n	Simple_repeat	1	1436	(0)	1124206
9431	1.8	22.6	0.4	chr13	114352578	114353941	(10387)	+	TAR1	Satellite/telo	314	2069	(42)	1125575
116	0.0	5.6	0.0	chr14	18966710	18966835	(88076883)	+	(CGCACGC)n	Simple_repeat	1	133	(0)	1126269
2176	4.0	0.0	0.0	chr14	19668195	19668466	(87375252)	+	L1PA6	LINE/L1	5515	5786	(368)	1127019
16	28.9	0.0	3.2	chr14	19668474	19668535	(87375183)	+	(GCG)n	Simple_repeat	1	62	(0)	1127020
16	19.4	2.4	0.0	chr14	20971438	20971478	(86072240)	+	(CTCC)n	Simple_repeat	1	42	(0)	1128895
211	35.1	5.1	0.8	chr14	21734396	21734527	(85309191)	C	MIRb	SINE/MIR	(109)	159	22	1130323
905	26.3	6.7	1.4	chr14	23025562	23025858	(84017860)	+	UCON86	LINE/L2	360	673	(9)	1132172
342	30.3	10.0	10.3	chr14	24037162	24037433	(83006285)	C	MamTip2	DNA/hAT-Tip100	(4)	301	31	1133674
288	19.3	0.0	18.6	chr14	25132471	25132572	(81911146)	+	Tigger15a	DNA/TcMar-Tigger	485	567	(148)	1135144
963	30.8	10.3	3.0	chr14	25132595	25133261	(81910457)	+	MamGypLTR3	LTR/Gypsy	162	882	(12)	1135145
390	36.8	7.7	9.3	chr14	29520741	29521557	(77522161)	+	L2b	LINE/L2	2569	3356	(19)	1140605
12	29.2	0.0	6.3	chr14	29521928	29521990	(77521728)	+	(TTC)n	Simple_repeat	1	63	(0)	1140606
11	16.4	5.9	0.0	chr14	30380676	30380709	(76663009)	+	G-rich	Low_complexity	1	36	(0)	1141748
17	6.8	6.5	0.0	chr14	31207671	31207701	(75836017)	+	(GGC)n	Simple_repeat	1	33	(0)	1143146
205	21.9	1.5	9.9	chr14	31208260	31208330	(75835388)	C	MIRb	SINE/MIR	(82)	186	122	1143147
2398	12.1	0.0	0.0	chr14	31329713	31330010	(75713708)	C	AluSg	SINE/Alu	(12)	298	1	1143426
10338	11.5	6.0	2.6	chr14	31330011	31330506	(75713212)	C	THE1C-int	LTR/ERVL-MaLR	(528)	1052	566	1143424
2392	9.2	0.3	1.4	chr14	31330507	31330801	(75712917)	+	AluY	SINE/Alu	1	292	(19)	1143427
2158	14.4	0.7	0.0	chr14	31783513	31783817	(75259901)	C	AluSx1	SINE/Alu	(5)	307	1	1144178
12	22.8	0.0	7.5	chr14	34060123	34060175	(72983543)	+	(GGCGC)n	Simple_repeat	1	53	(0)	1147172
19	32.9	1.2	1.2	chr14	36517635	36517725	(70525993)	+	(CTG)n	Simple_repeat	1	91	(0)	1151703
14	5.0	0.0	0.0	chr14	36581060	36581080	(70462638)	+	(CGC)n	Simple_repeat	1	21	(0)	1151796
1805	13.2	5.7	0.0	chr14	37340429	37340708	(69703010)	+	AluJo	SINE/Alu	1	297	(15)	1152857
3738	12.4	9.1	1.4	chr14	37340709	37341165	(69702553)	+	Tigger3b	DNA/TcMar-Tigger	737	1231	(0)	1152856
1602	19.2	4.8	0.4	chr14	38889921	38890080	(68153638)	C	AluJb	SINE/Alu	(22)	290	130	1154768
32	0.0	0.0	0.0	chr14	38890081	38890110	(68153608)	+	(T)n	Simple_repeat	1	30	(0)	1154769
1602	19.2	4.8	0.4	chr14	38890111	38890226	(68153492)	C	AluJb	SINE/Alu	(195)	117	2	1154768
16	16.9	0.0	0.0	chr14	49892575	49892601	(57151117)	+	A-rich	Low_complexity	1	27	(0)	1168853
32419	5.6	0.8	0.1	chr14	52168473	52172109	(54871609)	+	HERVK9-int	LTR/ERVK	2357	6021	(0)	1172536
3165	9.4	4.2	0.0	chr14	52172122	52172577	(54871141)	+	MER9a3	LTR/ERVK	37	512	(0)	1172538
14	9.3	5.3	5.0	chr14	53432498	53432535	(53611183)	+	(TGG)n	Simple_repeat	1	40	(0)	1174515
886	26.9	6.1	0.4	chr14	53432747	53432992	(53610726)	+	MIR	SINE/MIR	2	262	(0)	1174516
13	25.5	3.1	7.1	chr14	53946722	53946817	(53096901)	+	G-rich	Low_complexity	1	99	(0)	1175250
484	30.5	2.8	9.5	chr14	54572047	54572350	(52471368)	C	L2b	LINE/L2	(0)	3375	3093	1176162
344	27.4	10.0	2.2	chr14	54572446	54572583	(52471135)	C	Tigger16a	DNA/TcMar-Tigger	(722)	235	86	1176163
256	22.7	2.9	0.0	chr14	54572681	54572746	(52470972)	+	MIRc	SINE/MIR	94	161	(107)	1176164
229	26.0	19.3	2.9	chr14	54773829	54773979	(52269739)	C	L2a	LINE/L2	(1)	3425	3220	1176431
229	32.8	7.1	1.5	chr14	54773990	54774122	(52269596)	+	MIR3	SINE/MIR	21	161	(47)	1176432
332	27.1	11.0	0.8	chr14	54774164	54774293	(52269425)	+	MIR	SINE/MIR	44	188	(74)	1176433
313	27.9	4.9	1.4	chr14	58395685	58395822	(48647896)	+	MIRb	SINE/MIR	1	143	(125)	1182162
18	21.1	0.0	3.8	chr14	58396108	58396160	(48647558)	+	(GGCG)n	Simple_repeat	1	53	(0)	1182163
388	30.2	3.0	2.5	chr14	59511921	59512117	(47531601)	+	L1ME1	LINE/L1	51	248	(6152)	1183813
540	25.6	0.6	0.0	chr14	59512153	59512320	(47531398)	+	L1ME1	LINE/L1	3915	4083	(2236)	1183813
1047	23.9	11.4	3.0	chr14	59512322	59512649	(47531069)	+	MER77	LTR/ERVL	245	603	(1)	1183814
15844	16.7	1.5	1.8	chr14	59686456	59689984	(47353734)	+	L1PA15-16	LINE/L1	3	2858	(3995)	1184028
15	24.5	5.8	1.4	chr14	60515657	60515725	(46527993)	+	(GGCCTG)n	Simple_repeat	1	73	(0)	1185116
13	9.8	9.1	0.0	chr14	61280990	61281022	(45762696)	+	(AGGCCC)n	Simple_repeat	1	36	(0)	1186281
13	21.9	2.3	2.2	chr14	61695857	61695900	(45347818)	+	(GCCC)n	Simple_repeat	1	45	(0)	1186913
2091	12.4	0.3	1.0	chr14	61837234	61837532	(45206186)	C	AluSz6	SINE/Alu	(9)	303	7	1187157
9947	6.1	13.2	0.7	chr14	64657996	64659374	(42384344)	+	LTR12C	LTR/ERV1	3	1579	(0)	1191688
17797	14.3	3.4	1.8	chr14	66605832	66610303	(40433415)	C	L1PA16	LINE/L1	(821)	5662	1107	1194826
1280	18.5	2.2	0.0	chr14	66610326	66610547	(40433171)	C	L1PA16	LINE/L1	(6270)	233	7	1194826
2398	15.9	7.8	0.9	chr14	66610623	66611073	(40432645)	C	MER31A	LTR/ERV1	(0)	485	1	1194828
10449	17.9	3.4	1.8	chr14	66660639	66665291	(40378427)	+	L1PA12	LINE/L1	8	5247	(2334)	1194892
17	18.2	0.0	0.0	chr14	68788922	68788952	(38254766)	+	G-rich	Low_complexity	1	31	(0)	1198272
27	8.3	0.0	0.0	chr14	68951823	68951861	(38091857)	+	(TCAT)n	Simple_repeat	1	39	(0)	1198545
247	24.2	3.1	0.0	chr14	68951864	68951925	(38091793)	C	L2a	LINE/L2	(19)	3407	3344	1198546
262	23.5	6.6	0.0	chr14	68952110	68952194	(38091524)	+	MIR3	SINE/MIR	104	194	(14)	1198547
17	11.1	0.0	0.0	chr14	69573038	69573066	(37470652)	+	(GCT)n	Simple_repeat	1	29	(0)	1199785
28	3.3	0.0	0.0	chr14	69573087	69573117	(37470601)	+	(GCG)n	Simple_repeat	1	31	(0)	1199786
2061	24.3	6.9	1.7	chr14	69580197	69580735	(37462983)	+	LTR41B	LTR/ERVL	1	569	(189)	1199803
650	22.4	5.4	4.4	chr14	72104305	72104579	(34939139)	C	Charlie29a	DNA/hAT-Charlie	(0)	719	442	1203809
651	29.0	7.0	3.0	chr14	72416761	72416991	(34626727)	+	MIR	SINE/MIR	14	254	(8)	1204259
2316	12.8	0.0	0.0	chr14	73285644	73285939	(33757779)	+	AluSx	SINE/Alu	1	296	(16)	1205881
1443	20.4	7.5	2.1	chr14	73286027	73286190	(33757528)	C	AluJr4	SINE/Alu	(17)	295	135	1205882
35	0.0	0.0	0.0	chr14	73286191	73286223	(33757495)	+	(T)n	Simple_repeat	1	33	(0)	1205883
1443	20.4	7.5	2.1	chr14	73286224	73286337	(33757381)	C	AluJr4	SINE/Alu	(178)	134	1	1205882
1922	15.7	0.0	4.7	chr14	75492414	75492731	(31550987)	+	AluJr	SINE/Alu	1	303	(9)	1210565
415	25.6	3.3	0.8	chr14	75492837	75492954	(31550764)	+	MIR3	SINE/MIR	58	178	(30)	1210566
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
10911	9.8	4.5	1.6	chr14	88451825	88452511	(18591207)	C	L1PB1	LINE/L1	(4987)	1876	1193	1230444
1094	16.3	2.1	0.5	chr14	88452514	88452704	(18591014)	C	L1PB1	LINE/L1	(6669)	194	1	1230444
34	16.9	1.3	4.5	chr14	90758324	90758481	(16285237)	+	(GGCGG)n	Simple_repeat	1	152	(0)	1234414
315	30.8	7.3	0.2	chr14	92511433	92511582	(14532136)	C	MIRb	SINE/MIR	(29)	179	27	1237681
2883	16.2	4.7	8.7	chr14	92511825	92512488	(14531230)	C	L1MB7	LINE/L1	(5)	6179	5544	1237682
1717	10.4	0.0	0.0	chr14	92714995	92715214	(14328504)	C	AluSx	SINE/Alu	(8)	304	85	1238079
14	15.9	0.0	0.0	chr14	93789096	93789123	(13254595)	+	(CCG)n	Simple_repeat	1	28	(0)	1240009
188	12.9	0.0	0.0	chr14	93789783	93789813	(13253905)	C	L2b	LINE/L2	(3)	3372	3342	1240010
15	17.7	2.2	4.3	chr14	93939678	93939730	(13103988)	+	G-rich	Low_complexity	1	51	(0)	1240324
592	28.3	0.1	2.5	chr14	93939833	93940016	(13103702)	C	MIRb	SINE/MIR	(80)	188	4	1240325
844	26.5	8.8	4.5	chr14	94218009	94218323	(12825395)	+	L1MCc	LINE/L1	1643	2075	(4962)	1240815
99	32.9	2.3	1.4	chr14	94218333	94218761	(12824957)	+	(CA)n	Simple_repeat	1	439	(0)	1240817
847	24.4	11.8	7.0	chr14	94218765	94219057	(12824661)	+	L1MCc	LINE/L1	2085	2398	(4639)	1240815
15	25.6	0.0	0.0	chr14	94769245	94769286	(12274432)	+	(CCGC)n	Simple_repeat	1	42	(0)	1241772
16	20.1	0.0	5.9	chr14	95157310	95157360	(11886358)	+	(GCC)n	Simple_repeat	1	51	(0)	1242512
8106	5.1	2.4	1.4	chr14	95426966	95427566	(11616152)	+	LTR13	LTR/ERVK	96	709	(298)	1242996
215	22.1	16.5	1.1	chr14	95442522	95442608	(11601110)	C	MER5A	DNA/hAT-Charlie	(40)	149	47	1243033
525	28.3	2.4	5.5	chr14	95442798	95443014	(11600704)	+	L2a	LINE/L2	3215	3424	(2)	1243034
209	25.0	4.5	5.6	chr14	96796975	96797063	(10246655)	C	MIRb	SINE/MIR	(0)	268	175	1245550
3527	15.8	0.0	0.7	chr14	98952039	98952631	(8091087)	+	L1PA15	LINE/L1	5577	6165	(0)	1249250
19	4.5	0.0	0.0	chr14	98952645	98952667	(8091051)	+	(A)n	Simple_repeat	1	23	(0)	1249251
39	2.5	0.0	0.0	chr14	99175207	99175246	(7868472)	+	(CTC)n	Simple_repeat	1	40	(0)	1249629
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
538	26.7	8.0	5.5	chr14	99659004	99659221	(7384497)	+	MIR	SINE/MIR	14	237	(25)	1250384
20	25.4	2.7	6.2	chr14	99971306	99971415	(7072303)	+	(CCGCCC)n	Simple_repeat	1	113	(0)	1250931
248	27.3	0.0	3.8	chr14	100155176	100155255	(6888463)	+	Tigger16a	DNA/TcMar-Tigger	126	202	(755)	1251289
2224	10.1	0.0	3.2	chr14	100377294	100377609	(6666109)	C	AluSx	SINE/Alu	(6)	306	1	1251760
2463	6.5	1.0	0.0	chr14	100378173	100378466	(6665252)	C	AluSq2	SINE/Alu	(16)	297	1	1251761
237	21.0	1.9	10.6	chr14	100654541	100654654	(6389064)	+	MIR1_Amn	SINE/MIR	64	159	(49)	1252216
709	24.4	2.7	1.1	chr14	100663242	100663423	(6380295)	C	MIR	SINE/MIR	(4)	258	74	1252228
876	24.9	14.5	0.7	chr14	100663498	100663776	(6379942)	C	MER33	DNA/hAT-Charlie	(0)	324	1	1252229
27	24.8	3.4	4.1	chr14	100726799	100726916	(6316802)	+	(CGGCGG)n	Simple_repeat	1	122	(0)	1252315
22	29.7	1.8	3.6	chr14	100726954	100727062	(6316656)	+	(CCCGCG)n	Simple_repeat	1	111	(0)	1252316
9031	22.6	3.8	3.3	chr14	100759210	100760660	(6283058)	+	L1MB8	LINE/L1	3744	5200	(1119)	1252355
1965	16.9	0.0	0.7	chr14	100760661	100760833	(6282885)	C	AluJb	SINE/Alu	(6)	306	135	1252362
16	15.2	2.0	6.0	chr14	102507811	102507859	(4535859)	+	(GCGCCC)n	Simple_repeat	1	50	(0)	1255052
22	13.0	0.0	2.3	chr14	102930091	102930134	(4113584)	+	(CCGCC)n	Simple_repeat	1	44	(0)	1255916
17	10.5	3.2	0.0	chr14	103031974	103032004	(4011714)	+	(TAT)n	Simple_repeat	1	32	(0)	1256068
847	28.2	8.5	6.4	chr14	103354907	103355104	(3688614)	C	ERV3-16A3_I-int	LTR/ERVL	(1850)	3376	3185	1256625
456	28.3	0.9	0.0	chr14	103921710	103921822	(3121896)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	1257798
31	10.7	0.0	0.0	chr14	104331942	104331993	(2711725)	+	(GCAGCAGT)n	Simple_repeat	1	52	(0)	1258307
2012	10.7	5.5	0.0	chr14	104631765	104632053	(2411665)	C	AluSx1	SINE/Alu	(6)	306	1	1258625
490	29.0	1.7	8.7	chr14	104632054	104632110	(2411608)	+	MER3	DNA/hAT-Charlie	162	208	(1)	1258624
976	15.5	0.0	4.2	chr14	104632194	104632361	(2411357)	+	AluSz6	SINE/Alu	137	297	(15)	1258626
9782	10.7	6.7	6.7	chr14	104750448	104752026	(2291692)	C	LTR12C	LTR/ERV1	(0)	1579	1	1258775
1100	19.7	4.0	0.5	chr14	104752292	104752509	(2291209)	+	AluJb	SINE/Alu	73	298	(14)	1258776
408	29.6	4.8	2.7	chr14	104793465	104793648	(2250070)	C	L2b	LINE/L2	(1)	3374	3187	1258816
23	19.9	0.0	3.3	chr14	104826530	104826590	(2217128)	+	(CCCGCGC)n	Simple_repeat	1	61	(0)	1258876
21	5.0	7.0	2.2	chr14	105415231	105415273	(1628445)	+	(CGCGGGG)n	Simple_repeat	1	46	(0)	1259656
16	16.8	1.9	5.7	chr14	105529129	105529180	(1514538)	+	(GCGGC)n	Simple_repeat	1	53	(0)	1259805
15	16.9	0.0	2.9	chr14	105529383	105529417	(1514301)	+	(CTG)n	Simple_repeat	1	35	(0)	1259806
22	28.3	2.2	2.2	chr14	105529657	105529745	(1513973)	+	(CCG)n	Simple_repeat	1	91	(0)	1259807
1262	16.9	10.4	7.4	chr14	106882797	106883160	(160558)	C	L1MC3	LINE/L1	(1)	7784	7409	1261163
3396	10.1	0.2	0.9	chr14	106883179	106883718	(160000)	+	TAR1	Satellite/telo	484	1019	(1092)	1261164
18	30.9	2.7	1.3	chr15	20294929	20295001	(81696188)	+	(CG)n	Simple_repeat	1	75	(0)	1263128
22	12.8	0.0	0.0	chr15	20295410	20295443	(81695746)	+	(GT)n	Simple_repeat	1	34	(0)	1263129
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
2243	10.3	0.0	1.3	chr15	29102473	29102774	(72888415)	+	AluSq2	SINE/Alu	1	298	(15)	1274985
2822	11.8	5.2	13.7	chr15	29656968	29657055	(72334134)	C	LTR12F	LTR/ERV1	(0)	519	432	1275820
1499	15.1	0.0	4.8	chr15	29657056	29657326	(72333863)	C	AluYj4	SINE/Alu	(20)	291	34	1275821
2822	11.8	5.2	13.7	chr15	29657327	29657807	(72333382)	C	LTR12F	LTR/ERV1	(88)	431	1	1275820
284	23.8	1.2	0.0	chr15	29925739	29925818	(72065371)	C	L1MB8	LINE/L1	(2)	6176	6096	1276250
19	10.1	0.0	0.0	chr15	39976788	39976819	(62014370)	+	(CGAGGA)n	Simple_repeat	1	32	(0)	1290481
14	20.1	3.9	3.8	chr15	39976890	39976940	(62014249)	+	(TTCC)n	Simple_repeat	1	53	(0)	1290482
614	16.5	5.2	0.0	chr15	39976941	39977049	(62014140)	C	AluSz6	SINE/Alu	(2)	310	196	1290483
180	30.0	3.2	3.2	chr15	40117444	40117505	(61873684)	C	L3	LINE/CR1	(3245)	854	793	1290705
3677	20.0	15.7	9.3	chr15	40678684	40679326	(61311863)	C	L1MA3	LINE/L1	(5118)	2447	1653	1291691
2505	6.7	0.0	0.0	chr15	40679327	40679623	(61311566)	C	AluYf1	SINE/Alu	(14)	297	1	1291709
669	18.6	4.8	0.0	chr15	42059660	42059777	(59931412)	+	AluJo	SINE/Alu	2	125	(187)	1294487
971	31.6	10.3	2.4	chr15	42134184	42134747	(59856442)	+	L1MEi	LINE/L1	699	1322	(5781)	1294618
1617	18.8	7.4	10.3	chr15	44298772	44299246	(57691943)	+	MLT1C	LTR/ERVL-MaLR	8	467	(0)	1298596
7071	8.4	3.5	2.2	chr15	44784189	44785182	(57206007)	C	LTR13	LTR/ERVK	(0)	1007	1	1299553
2865	7.9	0.3	0.0	chr15	44852802	44853180	(57138009)	C	L1PA8	LINE/L1	(0)	6172	5793	1299674
1971	15.3	3.8	3.3	chr15	49225287	49225623	(52765566)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1305993
6323	23.3	1.0	1.9	chr15	49225624	49226525	(52764664)	C	L1P4a	LINE/L1	(5596)	907	7	1305992
937	18.8	2.2	0.6	chr15	49928933	49929114	(52062075)	+	MER5A	DNA/hAT-Charlie	2	186	(3)	1306860
305	23.3	12.9	14.1	chr15	49929171	49929390	(52061799)	+	MIRb	SINE/MIR	25	241	(27)	1306861
12	27.1	0.0	3.9	chr15	51737517	51737568	(50253621)	+	(CGGAGC)n	Simple_repeat	1	52	(0)	1309993
18	19.9	0.0	0.0	chr15	51737671	51737710	(50253479)	+	(CCT)n	Simple_repeat	1	40	(0)	1309994
270	22.6	1.9	0.0	chr15	51782526	51782578	(50208611)	C	Tigger16a	DNA/TcMar-Tigger	(783)	174	121	1310078
609	24.2	6.5	6.8	chr15	52139482	52139713	(49851476)	C	MIR	SINE/MIR	(16)	246	16	1310797
10595	21.2	4.2	3.7	chr15	55552384	55553399	(46437790)	+	L1PA10	LINE/L1	2195	2655	(5508)	1315772
2094	10.9	0.3	4.8	chr15	55553400	55553710	(46437479)	C	AluSz	SINE/Alu	(15)	297	1	1315774
2267	8.4	0.0	0.0	chr15	55774599	55774884	(46216305)	+	AluSx1	SINE/Alu	23	308	(4)	1316165
4281	13.4	0.3	0.9	chr15	56846817	56847502	(45143687)	C	L1PB4	LINE/L1	(0)	6156	5475	1317728
185	36.7	10.9	5.4	chr15	57560259	57560517	(44430672)	C	L2c	LINE/L2	(0)	3387	3113	1318859
217	31.2	4.4	7.6	chr15	57866037	57866154	(44125035)	C	MER5B	DNA/hAT-Charlie	(63)	115	2	1319319
343	24.2	13.7	0.0	chr15	57866403	57866534	(44124655)	C	MER5C	DNA/hAT-Charlie	(3)	310	158	1319320
2094	14.7	0.6	0.3	chr15	58696453	58696764	(43294425)	C	AluSq2	SINE/Alu	(0)	313	1	1320618
11500	16.0	8.5	6.2	chr15	58696798	58698302	(43292887)	+	L1MA4A	LINE/L1	1045	2599	(4967)	1320619
547	27.6	5.5	1.2	chr15	63093338	63093509	(38897680)	C	MIR	SINE/MIR	(0)	262	83	1327936
235	24.2	10.2	0.0	chr15	63601064	63601187	(38390002)	+	MIRc	SINE/MIR	23	171	(97)	1328846
11705	9.9	2.8	0.8	chr15	66084301	66088368	(35902821)	+	L1PBa1	LINE/L1	251	4403	(2459)	1333957
13	18.3	2.6	2.5	chr15	66386883	66386921	(35604268)	+	(TCCCC)n	Simple_repeat	1	40	(0)	1334597
247	35.3	5.5	0.8	chr15	66497390	66497509	(35493680)	+	MER5A	DNA/hAT-Charlie	63	188	(1)	1334818
308	23.3	0.0	1.4	chr15	66862878	66862951	(35128238)	+	MIR3	SINE/MIR	106	178	(30)	1335605
16	14.2	5.1	0.0	chr15	66863082	66863120	(35128069)	+	(GTGTGC)n	Simple_repeat	1	41	(0)	1335606
609	32.6	3.9	2.2	chr15	66906155	66906383	(35084806)	+	MIRb	SINE/MIR	5	237	(31)	1335681
455	30.7	6.2	7.9	chr15	68280295	68280609	(33710580)	C	L2c	LINE/L2	(5)	3382	3074	1338058
2333	8.7	0.0	1.3	chr15	68305905	68306203	(33684986)	+	AluY	SINE/Alu	1	295	(16)	1338103
15	0.0	0.0	0.0	chr15	68306310	68306326	(33684863)	+	(TC)n	Simple_repeat	1	17	(0)	1338104
14	21.3	1.9	5.5	chr15	68306892	68306945	(33684244)	+	(CTTT)n	Simple_repeat	1	55	(0)	1338105
1222	22.2	11.3	0.6	chr15	68559886	68560225	(33430964)	C	ERV3-16A3_LTR	LTR/ERVL	(0)	422	42	1338559
2299	11.9	0.0	0.6	chr15	72312345	72312655	(29678534)	+	AluSx1	SINE/Alu	1	309	(3)	1345233
702	25.5	1.3	1.9	chr15	72313153	72313308	(29677881)	+	MIR	SINE/MIR	6	160	(102)	1345234
1340	7.0	0.0	0.6	chr15	72687125	72687282	(29303907)	C	AluSq2	SINE/Alu	(20)	293	137	1345918
2504	8.9	0.0	0.0	chr15	72687322	72687623	(29303566)	+	AluSz	SINE/Alu	1	302	(10)	1345919
1286	34.8	8.6	1.5	chr15	73636792	73637507	(28353682)	+	L2b	LINE/L2	607	1377	(2042)	1347436
19	20.0	2.2	0.0	chr15	73927408	73927453	(28063736)	+	(GGC)n	Simple_repeat	1	47	(0)	1347951
15	14.4	5.0	2.4	chr15	73927563	73927602	(28063587)	+	(GCC)n	Simple_repeat	1	42	(0)	1347952
525	25.7	5.3	2.0	chr15	74460877	74461023	(27530166)	C	MIRb	SINE/MIR	(55)	213	62	1348854
298	22.2	4.0	0.0	chr15	75194387	75194458	(26796731)	+	MIR	SINE/MIR	183	257	(5)	1350381
2203	13.1	0.0	1.0	chr15	75204465	75204809	(26786380)	C	AluSz	SINE/Alu	(0)	312	1	1350398
209	25.0	3.7	0.0	chr15	75205082	75205133	(26786056)	+	MIRc	SINE/MIR	26	79	(189)	1350399
15	20.0	6.8	1.6	chr15	76178232	76178290	(25812899)	+	(TGGAGAC)n	Simple_repeat	1	63	(0)	1352138
279	31.7	1.6	5.4	chr15	78082770	78082899	(23908290)	+	MIR3	SINE/MIR	63	187	(21)	1355162
2198	9.2	0.7	0.0	chr15	78202227	78202508	(23788681)	C	AluSx3	SINE/Alu	(27)	284	1	1355410
889	27.8	4.1	3.3	chr15	78202706	78203070	(23788119)	+	L1ME4a	LINE/L1	5545	5912	(212)	1355411
2469	4.9	2.0	0.0	chr15	79993083	79993370	(21997819)	+	AluY	SINE/Alu	3	296	(15)	1358746
17062	14.8	13.9	13.0	chr15	80366623	80369179	(21622010)	+	HUERS-P3b-int	LTR/ERV1	17	3012	(4406)	1359425
246	35.1	0.0	1.1	chr15	80996382	80996476	(20994713)	C	Tigger16a	DNA/TcMar-Tigger	(759)	198	105	1360507
342	34.4	1.5	3.0	chr15	80996489	80996620	(20994569)	C	SVA_E	Retroposon/SVA	(1038)	344	215	1360508
615	22.2	0.0	0.0	chr15	80996518	80996625	(20994564)	+	FLAM_C	SINE/Alu	14	121	(22)	1360509
16	0.0	0.0	0.0	chr15	80996638	80996658	(20994531)	+	(TAAA)n	Simple_repeat	1	21	(0)	1360510
1674	16.0	11.0	4.1	chr15	80996689	80996775	(20994414)	+	L1MB3	LINE/L1	5790	5875	(308)	1360511
393	34.1	7.1	0.6	chr15	81266291	81266473	(20724716)	C	MIRb	SINE/MIR	(56)	212	17	1361004
18	4.5	0.0	0.0	chr15	82052945	82052967	(19938222)	+	(GC)n	Simple_repeat	1	23	(0)	1362254
31	3.3	0.0	0.0	chr15	82052968	82052998	(19938191)	+	(CA)n	Simple_repeat	1	31	(0)	1362255
377	22.6	3.4	0.0	chr15	82053085	82053174	(19938015)	+	MIRb	SINE/MIR	72	168	(100)	1362256
19	17.7	0.0	10.3	chr15	82680391	82680468	(19310721)	+	G-rich	Low_complexity	1	78	(0)	1363260
188	28.6	0.0	0.0	chr15	84023739	84023794	(17967395)	C	L3	LINE/CR1	(5)	4094	4039	1365508
1693	23.0	5.1	2.6	chr15	84023802	84023974	(17967215)	C	Charlie4a	DNA/hAT-Charlie	(0)	508	338	1365509
2400	8.1	0.0	0.3	chr15	84023975	84024271	(17966918)	+	AluY	SINE/Alu	2	297	(14)	1365510
28	3.3	0.0	0.0	chr15	84571038	84571068	(17420121)	+	(CCCTCAC)n	Simple_repeat	1	31	(0)	1366184
49	0.0	0.0	0.0	chr15	84571275	84571316	(17419873)	+	(GT)n	Simple_repeat	1	42	(0)	1366185
2187	12.8	0.0	0.0	chr15	84878963	84879260	(17111929)	C	AluSz	SINE/Alu	(14)	298	1	1366807
598	29.0	5.1	2.5	chr15	88330901	88331294	(13659895)	C	L1ME4a	LINE/L1	(3)	6121	5708	1372191
527	30.0	9.7	2.1	chr15	89129646	89129876	(12861313)	+	MIRb	SINE/MIR	23	268	(0)	1373689
15	10.7	0.0	5.9	chr15	89359170	89359203	(12631986)	+	(CCTC)n	Simple_repeat	1	34	(0)	1374096
51	0.0	0.0	0.0	chr15	89408048	89408091	(12583098)	+	(AC)n	Simple_repeat	1	44	(0)	1374152
197	28.3	4.2	12.4	chr15	89430720	89430824	(12560365)	+	L2c	LINE/L2	3275	3370	(17)	1374190
12	16.6	2.6	5.0	chr15	89430904	89430942	(12560247)	+	G-rich	Low_complexity	1	40	(0)	1374191
29	0.0	0.0	0.0	chr15	89431139	89431163	(12560026)	+	(GT)n	Simple_repeat	1	25	(0)	1374192
1007	18.7	15.5	3.9	chr15	89431182	89431874	(12559315)	C	MER97c	DNA/hAT-Tip100	(4)	1125	247	1374193
266	27.8	7.7	4.4	chr15	90885998	90886110	(11105079)	+	MIR	SINE/MIR	16	132	(130)	1377300
683	14.8	10.2	2.6	chr15	90886249	90886401	(11104788)	+	MER58A	DNA/hAT-Charlie	45	210	(14)	1377301
1068	14.2	1.2	0.0	chr15	91022702	91022863	(10968326)	+	AluSx3	SINE/Alu	145	308	(3)	1377543
1574	21.4	11.0	2.4	chr15	91022867	91023282	(10967907)	+	L1MC5a	LINE/L1	1998	2457	(320)	1377544
37	29.6	1.2	4.1	chr15	91853567	91853734	(10137455)	+	(GGC)n	Simple_repeat	1	170	(0)	1378973
13	15.4	5.6	0.0	chr15	99105697	99105732	(2885457)	+	(CCGCCG)n	Simple_repeat	1	38	(0)	1389634
259	17.0	0.0	2.1	chr15	100869708	100869755	(1121434)	+	Tigger16a	DNA/TcMar-Tigger	126	172	(785)	1392031
491	30.4	7.9	3.1	chr15	100869822	100870110	(1121079)	C	L2a	LINE/L2	(175)	3251	2948	1392028
12	16.3	7.0	2.2	chr15	100973625	100973667	(1017522)	+	G-rich	Low_complexity	1	46	(0)	1392173
5212	12.1	22.1	0.7	chr15	101979520	101980763	(10426)	+	TAR1	Satellite/telo	483	2068	(43)	1393518
328	3.1	1.9	3.2	chr15	101980765	101981189	(10000)	+	(GGTTAG)n	Simple_repeat	1	433	(0)	1393519
3841	13.7	2.4	0.7	chr16	10059	11142	(90327203)	C	TAR1	Satellite/telo	(43)	1103	1	1394056
1910	18.1	0.3	0.0	chr16	712065	712374	(89625971)	C	AluJb	SINE/Alu	(1)	311	1	1395106
36	0.0	0.0	0.0	chr16	770481	770513	(89567832)	+	(CACCCC)n	Simple_repeat	1	33	(0)	1395189
51	27.1	1.3	5.9	chr16	909406	909641	(89428704)	+	(CACGCTA)n	Simple_repeat	1	239	(0)	1395325
1850	19.0	6.1	5.9	chr16	1056155	1056612	(89281733)	C	LTR1E	LTR/ERV1	(0)	804	346	1395450
14	20.4	0.0	15.2	chr16	1539016	1539153	(88799192)	+	(CCTCAGG)n	Simple_repeat	1	138	(0)	1396061
12	19.4	6.1	5.7	chr16	1539131	1539196	(88799149)	+	(ACGGCCTC)n	Simple_repeat	1	70	(0)	1396062
1023	17.2	0.0	1.1	chr16	1723443	1723618	(88614727)	+	AluJb	SINE/Alu	108	281	(31)	1396311
30	0.0	0.0	0.0	chr16	1723620	1723648	(88614697)	+	(AAAAC)n	Simple_repeat	1	29	(0)	1396320
236	31.8	0.0	0.0	chr16	1723697	1723762	(88614583)	+	MIRb	SINE/MIR	125	190	(78)	1396321
23	32.1	2.3	1.1	chr16	2164135	2164220	(88174125)	+	(GT)n	Simple_repeat	1	88	(0)	1396977
2133	5.5	0.7	10.9	chr16	2269110	2269439	(88068906)	C	AluSx3	SINE/Alu	(15)	296	1	1397132
12	19.3	0.0	3.0	chr16	2269665	2269697	(88068648)	+	(GGAT)n	Simple_repeat	1	33	(0)	1397133
2424	9.3	0.0	0.3	chr16	2919254	2919563	(87418782)	C	AluSc	SINE/Alu	(0)	309	1	1398183
731	22.7	0.0	0.0	chr16	2919566	2919693	(87418652)	C	FLAM_A	SINE/Alu	(14)	128	1	1398184
507	23.2	0.0	0.0	chr16	2927005	2927099	(87411246)	+	HERVK-int	LTR/ERVK	743	837	(6699)	1398199
1570	24.2	0.0	0.0	chr16	2927166	2927483	(87410862)	+	HERVK-int	LTR/ERVK	847	1164	(6372)	1398199
1113	14.9	0.0	0.0	chr16	2927480	2927660	(87410685)	+	HERVK-int	LTR/ERVK	1638	1818	(5718)	1398199
27	0.0	0.0	0.0	chr16	2965181	2965206	(87373139)	+	(GGGGC)n	Simple_repeat	1	26	(0)	1398270
37	0.0	0.0	0.0	chr16	3266869	3266900	(87071445)	+	(AC)n	Simple_repeat	1	32	(0)	1398861
569	19.3	12.3	3.6	chr16	3267458	3267597	(87070748)	+	MIR	SINE/MIR	83	236	(26)	1398862
14	22.7	0.0	2.3	chr16	4253899	4253941	(86084404)	+	G-rich	Low_complexity	1	43	(0)	1400765
359	23.4	17.6	1.3	chr16	4254280	4254435	(86083910)	+	L1ME1	LINE/L1	5875	6061	(118)	1400766
2071	5.6	0.0	3.7	chr16	4261285	4261552	(86076793)	C	AluYj4	SINE/Alu	(17)	294	37	1400783
354	35.0	9.4	3.6	chr16	4261553	4261684	(86076661)	+	L2b	LINE/L2	3203	3355	(20)	1400781
255	22.6	3.3	1.4	chr16	4624180	4624272	(85714073)	+	MIR	SINE/MIR	75	173	(95)	1401553
397	20.0	10.3	4.5	chr16	4945137	4945246	(85393099)	C	MamRep38	DNA/hAT	(21)	274	158	1402200
2014	14.8	0.7	0.7	chr16	4945401	4945703	(85392642)	C	AluJr4	SINE/Alu	(9)	303	1	1402201
596	21.4	1.2	4.2	chr16	8567536	8567701	(81770644)	C	MER20	DNA/hAT-Charlie	(53)	166	6	1409294
381	30.3	0.7	2.7	chr16	8568018	8568163	(81770182)	+	MIRb	SINE/MIR	2	144	(124)	1409295
286	30.4	3.4	3.4	chr16	8635755	8635873	(81702472)	C	L2a	LINE/L2	(4)	3422	3304	1409477
334	30.7	7.2	0.0	chr16	8869582	8869709	(81468636)	C	MIRb	SINE/MIR	(61)	169	29	1410012
2708	21.1	2.1	3.4	chr16	8869878	8870048	(81468297)	+	L1MB7	LINE/L1	5521	5688	(496)	1410013
33	20.9	2.1	1.4	chr16	10039763	10039838	(80298507)	+	G-rich	Low_complexity	1	76	(0)	1412562
263	25.1	3.9	2.0	chr16	10039876	10040769	(80297576)	+	(CA)n	Simple_repeat	1	929	(0)	1412563
8262	6.8	1.0	0.5	chr16	13904707	13905708	(76432637)	+	LTR13	LTR/ERVK	1	1007	(0)	1421123
972	18.7	0.0	0.0	chr16	14289639	14289804	(76048541)	C	AluJo	SINE/Alu	(10)	302	137	1421779
248	22.9	1.6	0.0	chr16	14289896	14289956	(76048389)	+	MamGypLTR3	LTR/Gypsy	598	659	(235)	1421780
234	27.4	6.2	5.4	chr16	14289984	14290095	(76048250)	+	MIR1_Amn	SINE/MIR	84	196	(34)	1421781
245	31.9	9.0	0.0	chr16	14290096	14290236	(76048109)	+	L1ME4b	LINE/L1	478	632	(260)	1421782
1934	14.6	0.0	0.0	chr16	17321383	17321656	(73016689)	C	AluSz	SINE/Alu	(37)	275	2	1428836
924	19.4	5.9	1.9	chr16	17321680	17321889	(73016456)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1428837
317	37.6	4.3	0.6	chr16	17322094	17322251	(73016094)	C	MIRb	SINE/MIR	(68)	200	37	1428838
452	28.5	1.2	2.7	chr16	19072188	19072375	(71265970)	+	MER106B	DNA/hAT-Charlie	897	1004	(55)	1432619
463	29.7	1.3	5.7	chr16	19072442	19072598	(71265747)	+	MIRb	SINE/MIR	1	150	(118)	1432620
1492	17.8	10.0	0.0	chr16	19502375	19502658	(70835687)	C	AluJr	SINE/Alu	(0)	312	2	1433730
353	32.4	2.6	1.8	chr16	19502664	19502776	(70835569)	+	MIR3	SINE/MIR	85	198	(10)	1433731
734	0.0	0.0	0.0	chr16	22297140	22297221	(68041124)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1439785
426	32.3	4.4	4.1	chr16	22899385	22899563	(67438782)	C	L2b	LINE/L2	(1889)	1530	1352	1441052
486	30.6	0.6	4.2	chr16	22948634	22948800	(67389545)	C	MIR	SINE/MIR	(84)	178	18	1441162
29	10.8	0.0	0.0	chr16	22949021	22949070	(67389275)	+	(TTCA)n	Simple_repeat	1	50	(0)	1441163
19	11.2	0.0	0.0	chr16	23835488	23835516	(66502829)	+	(GT)n	Simple_repeat	1	29	(0)	1443257
13	18.2	2.6	2.5	chr16	23835736	23835774	(66502571)	+	G-rich	Low_complexity	1	40	(0)	1443258
27	25.9	0.0	6.9	chr16	23836022	23836137	(66502208)	+	(CCGCGG)n	Simple_repeat	1	116	(0)	1443259
2322	11.2	0.0	0.0	chr16	25041882	25042185	(65296160)	+	AluSx1	SINE/Alu	1	304	(8)	1446087
4269	9.5	2.6	2.1	chr16	25042186	25042821	(65295524)	C	L1PREC2	LINE/L1	(16)	6144	5500	1446086
873	22.7	11.2	2.4	chr16	25148526	25148818	(65189527)	C	PRIMA41-int	LTR/ERV1	(6560)	358	37	1446301
1627	15.3	5.5	1.3	chr16	25148833	25149129	(65189216)	C	LTR35	LTR/ERV1	(22)	586	276	1446304
1343	8.6	8.7	2.3	chr16	25149130	25149344	(65189001)	+	MER30	DNA/hAT-Charlie	1	230	(0)	1446305
854	14.1	0.0	0.0	chr16	25149345	25149464	(65188881)	C	LTR35	LTR/ERV1	(327)	281	162	1446304
2221	10.2	0.0	0.0	chr16	25233515	25233797	(65104548)	+	AluSx	SINE/Alu	1	283	(29)	1446545
26	6.1	0.0	0.0	chr16	25233801	25233834	(65104511)	+	(AACAA)n	Simple_repeat	1	34	(0)	1446546
344	28.1	10.0	9.3	chr16	25233835	25233928	(65104417)	C	MamGypLTR3	LTR/Gypsy	(206)	688	596	1446544
1085	32.6	5.3	2.8	chr16	27130721	27131218	(63207127)	+	MamGypLTR3	LTR/Gypsy	372	882	(12)	1450436
613	28.3	5.6	0.9	chr16	27374587	27374807	(62963538)	+	MER113	DNA/hAT-Charlie	248	479	(42)	1451019
1144	27.7	6.6	6.9	chr16	27375088	27375598	(62962747)	+	MLT1K	LTR/ERVL-MaLR	23	519	(76)	1451020
14	21.9	5.5	1.7	chr16	28320612	28320666	(62017679)	+	(CCGC)n	Simple_repeat	1	58	(0)	1453205
20	0.0	0.0	0.0	chr16	29666503	29666524	(60671821)	+	(CT)n	Simple_repeat	1	22	(0)	1456243
34	0.0	0.0	0.0	chr16	29666525	29666553	(60671792)	+	(CA)n	Simple_repeat	1	29	(0)	1456244
23	10.9	0.0	2.4	chr16	29691994	29692035	(60646310)	+	(GTGTGC)n	Simple_repeat	1	42	(0)	1456321
37	0.0	2.6	0.0	chr16	29692249	29692286	(60646059)	+	(TTAT)n	Simple_repeat	1	39	(0)	1456322
2181	4.3	5.4	0.3	chr16	29692299	29692580	(60645765)	+	AluY	SINE/Alu	1	297	(14)	1456323
1991	11.4	0.7	2.0	chr16	29701776	29702081	(60636264)	+	AluSp	SINE/Alu	1	302	(11)	1456352
1191	12.4	0.6	1.6	chr16	29702085	29702269	(60636076)	+	AluSz6	SINE/Alu	127	309	(3)	1456353
1845	17.7	0.0	2.8	chr16	29849029	29849345	(60489000)	+	AluJr	SINE/Alu	1	308	(4)	1456696
1351	16.6	2.7	2.7	chr16	29943750	29943868	(60394477)	C	AluJb	SINE/Alu	(161)	151	27	1456928
241	36.5	10.1	1.2	chr16	29943960	29944266	(60394079)	C	L2c	LINE/L2	(609)	2810	2471	1456923
1935	16.5	0.3	0.7	chr16	29944267	29944569	(60393776)	+	AluJb	SINE/Alu	1	302	(10)	1456932
183	25.5	0.0	2.1	chr16	29995016	29995063	(60343282)	+	L2b	LINE/L2	3328	3374	(1)	1457034
11	17.1	2.9	2.8	chr16	29995281	29995315	(60343030)	+	(CCTCCG)n	Simple_repeat	1	36	(0)	1457035
212	25.4	0.0	3.3	chr16	30055389	30055449	(60282896)	C	L2a	LINE/L2	(0)	3426	3368	1457170
2215	6.5	1.3	5.2	chr16	30075444	30075752	(60262593)	+	AluSp	SINE/Alu	1	297	(16)	1457215
26	0.0	0.0	0.0	chr16	30076007	30076031	(60262314)	+	(GCG)n	Simple_repeat	1	25	(0)	1457216
248	28.6	4.2	1.1	chr16	30187520	30187611	(60150734)	+	MIR3	SINE/MIR	16	110	(98)	1457491
13	29.6	1.5	3.0	chr16	30394933	30394997	(59943348)	+	(CCCCAG)n	Simple_repeat	1	66	(0)	1457926
13	20.1	0.0	6.5	chr16	30395398	30395443	(59942902)	+	(GCCCCC)n	Simple_repeat	1	46	(0)	1457927
2234	10.5	1.0	1.3	chr16	30597815	30598120	(59740225)	C	AluSq2	SINE/Alu	(8)	305	1	1458436
271	23.4	5.0	8.7	chr16	30598121	30598183	(59740162)	+	MIRb	SINE/MIR	107	166	(102)	1458435
862	23.1	13.4	2.9	chr16	30598185	30598429	(59739916)	C	LTR40c	LTR/ERVL	(1)	464	190	1458437
751	16.0	0.0	6.4	chr16	30598425	30598451	(59739894)	C	FLAM_C	SINE/Alu	(2)	131	112	1458438
2254	11.4	0.3	0.0	chr16	30598452	30598758	(59739587)	+	AluSq2	SINE/Alu	1	308	(5)	1458439
252	25.0	12.3	5.7	chr16	30901896	30902001	(59436344)	C	MIRb	SINE/MIR	(39)	229	116	1459148
18	26.4	1.5	1.5	chr16	30902365	30902429	(59435916)	+	(CGCCGC)n	Simple_repeat	1	66	(0)	1459149
12	31.9	0.0	4.5	chr16	30985333	30985399	(59352946)	+	(TCCC)n	Simple_repeat	1	67	(0)	1459337
2571	5.0	0.0	0.0	chr16	31041710	31042006	(59296339)	C	AluY	SINE/Alu	(14)	297	1	1459473
12	21.1	0.0	2.9	chr16	31042146	31042180	(59296165)	+	(CTG)n	Simple_repeat	1	35	(0)	1459474
20	8.9	2.8	0.0	chr16	31202044	31202079	(59136266)	+	(TGCCC)n	Simple_repeat	1	37	(0)	1459827
14	13.9	2.9	2.9	chr16	31202707	31202740	(59135605)	+	(GCC)n	Simple_repeat	1	35	(0)	1459828
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
7549	4.2	6.0	0.2	chr16	46554268	46555216	(43783129)	+	LTR13	LTR/ERVK	1	1007	(0)	1465596
1612	17.8	2.1	3.8	chr16	46693520	46693806	(43644539)	+	AluJr4	SINE/Alu	1	282	(30)	1465830
33	12.8	0.0	0.0	chr16	46693807	46693857	(43644488)	+	(T)n	Simple_repeat	1	51	(0)	1465831
6442	1.8	1.0	1.3	chr16	46693858	46694651	(43643694)	C	SVA_F	Retroposon/SVA	(0)	1375	620	1465832
403	20.5	13.4	15.5	chr16	46844648	46844784	(43493561)	C	L1MB7	LINE/L1	(700)	5744	5610	1466145
16	19.2	0.0	0.0	chr16	48353980	48354009	(41984336)	+	(T)n	Simple_repeat	1	30	(0)	1468593
504	33.0	4.0	1.4	chr16	48630689	48630909	(41707436)	C	MIR	SINE/MIR	(20)	242	16	1469144
1271	23.6	9.4	1.7	chr16	49350240	49350593	(40987752)	+	MLT1B	LTR/ERVL-MaLR	1	384	(6)	1470376
1729	32.2	5.9	0.5	chr16	50671614	50672409	(39665936)	C	MamGypLTR3a	LTR/Gypsy	(3)	978	36	1472961
13	4.3	3.9	3.7	chr16	50673714	50673739	(39664606)	+	(GCA)n	Simple_repeat	1	27	(0)	1472965
2444	9.6	0.3	0.0	chr16	53420905	53421196	(36917149)	C	AluSz6	SINE/Alu	(19)	293	1	1477813
31	0.0	2.7	2.6	chr16	53421248	53421284	(36917061)	+	(TTAT)n	Simple_repeat	1	38	(0)	1477814
1720	10.9	1.0	0.3	chr16	53421318	53421603	(36916742)	C	LTR12D	LTR/ERV1	(966)	288	1	1477815
6793	17.7	4.4	5.2	chr16	53421604	53423315	(36915030)	C	MER57-int	LTR/ERV1	(1464)	6352	4167	1477816
1922	14.0	1.7	0.0	chr16	56956443	56956735	(33381610)	C	AluSx1	SINE/Alu	(9)	303	6	1484045
663	22.4	8.8	3.1	chr16	56956736	56956829	(33381516)	C	MER96B	DNA/hAT-Tip100	(308)	109	5	1484041
3570	18.8	6.3	7.3	chr16	56956917	56957111	(33381234)	+	L1MC3	LINE/L1	6859	7049	(736)	1484046
15	21.2	0.0	4.3	chr16	57528917	57528963	(32809382)	+	(CGCCCG)n	Simple_repeat	1	47	(0)	1485253
20	21.3	5.6	1.3	chr16	57528991	57529062	(32809283)	+	(GCGCGG)n	Simple_repeat	1	76	(0)	1485254
46	35.2	3.2	0.5	chr16	57591767	57591983	(32746362)	+	(CATC)n	Simple_repeat	1	224	(0)	1485374
2242	28.4	6.2	2.6	chr16	58298944	58299968	(32038377)	C	L1MEd	LINE/L1	(5456)	1647	584	1486820
17	8.8	5.3	2.5	chr16	67163444	67163481	(23174864)	+	(CTGGAG)n	Simple_repeat	1	40	(0)	1501203
21	22.3	4.4	4.3	chr16	67326772	67326861	(23011484)	+	(GGCG)n	Simple_repeat	1	94	(0)	1501441
2040	8.9	6.4	0.0	chr16	67327232	67327522	(23010823)	+	AluSx	SINE/Alu	2	312	(0)	1501442
13	10.7	6.7	0.0	chr16	67521560	67521589	(22816756)	+	GA-rich	Low_complexity	1	32	(0)	1501808
311	32.3	5.3	3.1	chr16	67521809	67521936	(22816409)	C	HAL1b	LINE/L1	(6)	2415	2285	1501809
20	26.9	0.0	2.9	chr16	67562427	67562496	(22775849)	+	(CCCCT)n	Simple_repeat	1	70	(0)	1501890
12	28.1	1.9	1.9	chr16	67562503	67562555	(22775790)	+	(GCGCCG)n	Simple_repeat	1	54	(0)	1501891
15	17.8	2.6	0.0	chr16	67562793	67562830	(22775515)	+	(CGGCGC)n	Simple_repeat	1	39	(0)	1501892
27	23.7	0.0	1.4	chr16	67562863	67562968	(22775377)	+	(GCCC)n	Simple_repeat	1	104	(0)	1501893
2404	10.5	0.0	0.0	chr16	67614066	67614370	(22723975)	+	AluSx	SINE/Alu	2	306	(6)	1502036
23	8.6	5.8	1.8	chr16	68510477	68510491	(21827854)	+	A-rich	Low_complexity	1	17	(0)	1503658
14	14.4	5.0	2.4	chr16	68520940	68520979	(21817366)	+	(CAGGCC)n	Simple_repeat	1	42	(0)	1503687
258	27.6	12.5	0.0	chr16	68521099	68521196	(21817149)	C	MIR3	SINE/MIR	(44)	164	53	1503688
297	14.6	0.0	0.0	chr16	70298422	70298462	(20039883)	C	AluYk11	SINE/Alu	(269)	42	2	1507658
961	18.1	0.0	0.0	chr16	70298489	70298648	(20039697)	C	FRAM	SINE/Alu	(12)	164	5	1507659
285	17.4	4.2	5.5	chr16	70298726	70298798	(20039547)	C	L1PB4	LINE/L1	(12)	6144	6073	1507660
834	11.0	0.0	0.8	chr16	71441251	71441377	(18896968)	C	AluJr	SINE/Alu	(179)	133	8	1509698
1887	11.2	2.9	6.5	chr16	74560319	74560639	(15777706)	C	AluSx1	SINE/Alu	(3)	309	1	1514915
288	7.0	10.9	3.4	chr16	74560641	74560699	(15777646)	+	MER57A-int	LTR/ERV1	758	821	(5366)	1514916
667	18.3	2.3	3.0	chr16	74560701	74560831	(15777514)	+	FLAM_A	SINE/Alu	1	130	(12)	1514917
13	12.5	0.0	3.5	chr16	74560832	74560860	(15777485)	+	GA-rich	Low_complexity	1	29	(0)	1514918
477	15.0	9.9	4.5	chr16	74560862	74560994	(15777351)	+	MER57A-int	LTR/ERV1	2384	2524	(3663)	1514916
14949	13.6	2.4	3.0	chr16	74561272	74562458	(15775887)	+	MER57A-int	LTR/ERV1	3309	4501	(1686)	1514916
34	24.6	0.0	2.3	chr16	75234052	75234138	(15104207)	+	(CA)n	Simple_repeat	1	87	(0)	1516365
44	0.0	0.0	0.0	chr16	75234165	75234202	(15104143)	+	(AC)n	Simple_repeat	1	38	(0)	1516366
13	11.6	3.6	0.0	chr16	75517522	75517549	(14820796)	+	(CTGCT)n	Simple_repeat	1	29	(0)	1516962
2510	5.8	0.3	1.0	chr16	75517726	75518035	(14820310)	+	AluSz	SINE/Alu	1	308	(4)	1516963
299	31.7	5.4	0.8	chr16	77971449	77971572	(12366773)	C	MamGypsy2-LTR	LTR/Gypsy	(6)	177	48	1520864
348	29.1	12.0	1.4	chr16	85136172	85136312	(5202033)	+	MIRc	SINE/MIR	27	188	(42)	1534259
462	27.8	4.3	9.0	chr16	86019407	86019651	(4318694)	C	MamGypLTR3a	LTR/Gypsy	(83)	898	666	1535872
34	1.8	6.7	3.1	chr16	86019876	86019935	(4318410)	+	(ATGCACACAC)n	Simple_repeat	1	64	(0)	1535873
187	34.3	13.6	1.0	chr16	88559027	88559129	(1779216)	+	MIRb	SINE/MIR	84	201	(67)	1540114
202	24.7	5.6	4.5	chr16	88559200	88559288	(1779057)	+	MER5A	DNA/hAT-Charlie	64	153	(36)	1540115
2324	6.4	0.0	0.0	chr16	88559413	88559718	(1778627)	C	AluY	SINE/Alu	(0)	311	2	1540116
258	26.1	8.8	2.2	chr16	88628919	88629055	(1709290)	C	Charlie1b	DNA/hAT-Charlie	(20)	503	357	1540239
1104	8.1	0.0	0.0	chr16	88629057	88629192	(1709153)	+	AluSz	SINE/Alu	1	136	(176)	1540240
16	5.1	14.6	0.0	chr16	88723236	88723276	(1615069)	+	(CTGCTC)n	Simple_repeat	1	47	(0)	1540361
819	24.9	8.6	3.8	chr16	89369498	89369919	(968426)	+	L1MD2	LINE/L1	5887	6342	(17)	1541155
3045	14.3	5.9	1.4	chr17	133885	134836	(83122605)	C	TAR1	Satellite/telo	(1043)	995	1	1544671
17	18.9	4.2	0.0	chr17	385824	385871	(82871570)	+	(CCCACC)n	Simple_repeat	1	50	(0)	1545097
1077	17.5	3.7	0.0	chr17	386377	386559	(82870882)	C	AluJr	SINE/Alu	(57)	255	66	1545098
24	9.6	4.4	0.0	chr17	387906	387950	(82869491)	+	(AGAC)n	Simple_repeat	1	47	(0)	1545100
12	8.0	0.0	9.4	chr17	752273	752304	(82505137)	+	(CCGCC)n	Simple_repeat	1	32	(0)	1545737
227	35.7	0.0	2.3	chr17	1048864	1048949	(82208492)	+	MamSINE1	SINE/tRNA-RTE	48	131	(159)	1546261
2134	9.7	4.6	0.0	chr17	1049176	1049463	(82207978)	C	AluSg	SINE/Alu	(6)	304	3	1546262
22	13.9	8.3	6.8	chr17	2724425	2724533	(80532908)	+	G-rich	Low_complexity	1	118	(0)	1549782
2301	9.0	0.0	3.1	chr17	2725091	2725411	(80532030)	+	AluSx1	SINE/Alu	1	311	(1)	1549783
271	26.1	5.1	5.1	chr17	2828430	2828546	(80428895)	C	L2a	LINE/L2	(284)	3142	3026	1550047
2383	7.7	1.0	0.3	chr17	2828985	2829283	(80428158)	C	AluSx1	SINE/Alu	(11)	301	1	1550050
2474	8.9	0.0	0.3	chr17	3682744	3683056	(79574385)	+	AluSq	SINE/Alu	2	313	(0)	1551500
2459	7.6	1.0	0.0	chr17	3683451	3683753	(79573688)	+	AluSx	SINE/Alu	1	306	(6)	1551501
195	27.9	17.5	0.0	chr17	3888289	3888392	(79369049)	C	MIR3	SINE/MIR	(60)	148	23	1551941
468	33.6	8.5	0.9	chr17	3888400	3888627	(79368814)	+	MIR	SINE/MIR	16	262	(0)	1551942
17	8.2	3.9	0.0	chr17	4195965	4195990	(79061451)	+	(CA)n	Simple_repeat	1	27	(0)	1552505
21	13.3	2.4	0.0	chr17	4196014	4196019	(79061422)	+	(CACC)n	Simple_repeat	1	37	(0)	1552506
16	19.2	0.0	0.0	chr17	4196020	4196049	(79061392)	+	(C)n	Simple_repeat	1	30	(0)	1552507
56	0.0	0.0	0.0	chr17	4196145	4196192	(79061249)	+	(AC)n	Simple_repeat	1	48	(0)	1552508
1580	11.7	17.4	0.0	chr17	5101198	5101453	(78155988)	+	AluJb	SINE/Alu	1	310	(2)	1554431
1288	18.3	11.2	3.6	chr17	5101454	5101606	(78155835)	C	L1MEc	LINE/L1	(6184)	216	51	1554430
19	28.8	1.3	2.5	chr17	5123335	5123413	(78134028)	+	(GGCGC)n	Simple_repeat	1	80	(0)	1554473
18	10.4	0.0	0.0	chr17	6444345	6444375	(76813066)	+	(GGGGCG)n	Simple_repeat	1	31	(0)	1557111
427	5.9	0.0	0.0	chr17	6444509	6444559	(76812882)	C	AluSp	SINE/Alu	(37)	276	226	1557112
274	18.4	0.0	0.0	chr17	6444520	6444568	(76812873)	+	SVA_C	Retroposon/SVA	336	384	(1000)	1557113
415	30.6	0.8	0.0	chr17	7052048	7052168	(76205273)	C	MLT1N2	LTR/ERVL-MaLR	(8)	554	433	1558136
322	29.5	18.5	1.6	chr17	7052208	7052400	(76205041)	C	MLT1N2	LTR/ERVL-MaLR	(218)	344	112	1558136
2206	11.2	0.0	0.0	chr17	7052474	7052758	(76204683)	+	AluSx	SINE/Alu	8	292	(20)	1558137
740	27.1	8.7	1.7	chr17	9658671	9658906	(73598535)	C	MLT1K	LTR/ERVL-MaLR	(4)	591	338	1563150
453	22.8	7.3	1.7	chr17	9658929	9659044	(73598397)	C	MLT1K	LTR/ERVL-MaLR	(319)	276	154	1563150
698	30.4	2.8	3.2	chr17	10398119	10398366	(72859075)	+	MIR	SINE/MIR	13	259	(3)	1564674
519	28.7	2.4	0.0	chr17	11031592	11031755	(72225686)	+	MIRb	SINE/MIR	42	209	(59)	1565736
26	0.0	0.0	0.0	chr17	11241060	11241084	(72016357)	+	(CGC)n	Simple_repeat	1	25	(0)	1566108
17	12.5	2.7	2.6	chr17	11241428	11241464	(72015977)	+	(GCT)n	Simple_repeat	1	38	(0)	1566109
17	20.6	4.0	0.0	chr17	13602592	13602642	(69654799)	+	(GTTT)n	Simple_repeat	1	53	(0)	1570039
23	29.4	0.0	0.0	chr17	16353137	16353206	(66904235)	+	(CGG)n	Simple_repeat	1	70	(0)	1574772
1106	14.0	0.0	0.0	chr17	16386580	16386743	(66870698)	+	AluJr	SINE/Alu	139	302	(10)	1574869
338	15.5	0.0	6.6	chr17	16387027	16387102	(66870339)	+	AluJb	SINE/Alu	231	301	(1)	1574863
920	14.5	19.8	1.4	chr17	16537292	16537501	(66719940)	C	MER58B	DNA/hAT-Charlie	(5)	336	79	1575180
18	12.4	2.9	0.0	chr17	17495259	17495293	(65762148)	+	(CGC)n	Simple_repeat	1	36	(0)	1576769
310	28.2	11.2	0.0	chr17	17568502	17568604	(65688837)	C	MIR3	SINE/MIR	(8)	200	85	1576869
21	10.0	0.0	0.0	chr17	17568823	17568855	(65688586)	+	(TCC)n	Simple_repeat	1	33	(0)	1576870
321	20.9	3.4	2.3	chr17	17569061	17569148	(65688293)	C	MER81	DNA/hAT-Blackjack	(0)	114	26	1576871
238	25.0	0.0	0.0	chr17	18167083	18167130	(65090311)	C	MamGypLTR3a	LTR/Gypsy	(251)	730	683	1578061
330	28.1	5.0	0.0	chr17	18167177	18167290	(65090151)	+	MER5A	DNA/hAT-Charlie	67	186	(3)	1578062
14	11.7	0.0	3.3	chr17	18625940	18625969	(64631472)	+	(AAAAC)n	Simple_repeat	1	30	(0)	1578849
959	22.5	7.4	7.4	chr17	18625974	18626299	(64631142)	+	L1MD	LINE/L1	4120	4445	(1701)	1578850
12	18.8	2.6	2.6	chr17	19867221	19867258	(63390183)	+	(GCGGCTC)n	Simple_repeat	1	39	(0)	1581428
13	17.1	5.9	6.9	chr17	19867480	19867547	(63389894)	+	G-rich	Low_complexity	1	72	(0)	1581429
14	21.8	0.0	4.3	chr17	19867617	19867662	(63389779)	+	(GGCCC)n	Simple_repeat	1	46	(0)	1581430
13	17.7	5.3	0.0	chr17	19868095	19868132	(63389309)	+	G-rich	Low_complexity	1	40	(0)	1581431
839	18.8	1.2	3.4	chr17	19992621	19992796	(63264645)	C	L1MB2	LINE/L1	(344)	5827	5656	1581719
478	17.3	0.0	0.0	chr17	19992797	19992899	(63264542)	C	AluSx3	SINE/Alu	(0)	311	207	1581720
446	15.9	8.9	6.5	chr17	19992952	19993126	(63264315)	+	FRAM	SINE/Alu	6	296	(6)	1581721
1967	13.9	1.3	0.0	chr17	19993138	19993440	(63264001)	+	AluJo	SINE/Alu	6	312	(0)	1581722
15	19.1	2.6	2.6	chr17	21280325	21280362	(61977079)	+	(TG)n	Simple_repeat	1	39	(0)	1583995
1235	24.4	10.8	1.0	chr17	21280435	21280704	(61976737)	+	L2a	LINE/L2	2962	3249	(177)	1583996
41	0.0	0.0	0.0	chr17	21376141	21376175	(61881266)	+	(TG)n	Simple_repeat	1	35	(0)	1584165
20	15.7	1.9	3.7	chr17	21376294	21376346	(61881095)	+	(GGCGC)n	Simple_repeat	1	54	(0)	1584166
3592	5.7	0.4	0.2	chr17	21456524	21456980	(61800461)	+	L1PA6	LINE/L1	5692	6149	(5)	1584298
26	25.6	0.0	2.4	chr17	21457071	21457152	(61800289)	+	(CGCCC)n	Simple_repeat	1	82	(0)	1584299
14	4.9	0.0	0.0	chr17	21843039	21843059	(61414382)	+	(GCC)n	Simple_repeat	1	21	(0)	1584858
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
738	27.4	5.1	2.8	chr17	27245528	27245775	(56011666)	+	LTR79	LTR/ERVL	274	527	(0)	1586370
14	26.4	4.2	2.7	chr17	28842798	28842868	(54414573)	+	(GCCTGC)n	Simple_repeat	1	74	(0)	1589458
7988	5.7	1.8	0.2	chr17	30011791	30012781	(53244660)	+	LTR13	LTR/ERVK	1	1007	(0)	1591776
367	32.2	14.6	1.0	chr17	30377112	30377418	(52880023)	+	L2	LINE/L2	2454	2809	(610)	1592474
14	0.0	4.0	3.9	chr17	32253055	32253079	(51004362)	+	(TGTT)n	Simple_repeat	1	26	(0)	1596407
2126	13.1	0.0	0.3	chr17	32253403	32253714	(51003727)	C	AluSx1	SINE/Alu	(1)	311	1	1596408
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
1192	13.5	9.6	0.5	chr17	34171143	34171351	(49086090)	C	MER30	DNA/hAT-Charlie	(0)	230	1	1600003
235	30.8	13.1	4.0	chr17	34171407	34171558	(49085883)	C	MamGypLTR3a	LTR/Gypsy	(254)	727	560	1600002
17	26.4	1.9	0.0	chr17	35089065	35089118	(48168323)	+	(CGC)n	Simple_repeat	1	55	(0)	1601648
25	28.1	0.0	6.6	chr17	35089283	35089292	(48168149)	+	(CCCCG)n	Simple_repeat	1	25	(96)	1601649
12	24.0	3.9	6.2	chr17	35089293	35089369	(48168072)	+	(CCCAGC)n	Simple_repeat	1	80	(0)	1601650
25	28.1	0.0	6.6	chr17	35089370	35089403	(48168038)	+	(CCCCG)n	Simple_repeat	26	121	(0)	1601649
195	33.6	8.8	2.2	chr17	35089760	35089896	(48167545)	C	MIRb	SINE/MIR	(116)	152	6	1601651
13	20.5	6.7	0.0	chr17	35741251	35741295	(47516146)	+	(CGCTG)n	Simple_repeat	1	48	(0)	1602707
210	24.7	7.7	0.0	chr17	36148808	36148934	(47108507)	C	MIR3	SINE/MIR	(10)	252	112	1603463
471	29.2	10.1	1.7	chr17	36149225	36149405	(47108036)	C	MIRb	SINE/MIR	(70)	198	1	1603464
224	19.2	1.4	6.4	chr17	39232470	39232547	(44024894)	C	L2c	LINE/L2	(297)	3090	3017	1609586
522	24.6	6.4	0.6	chr17	39622981	39623156	(43634285)	+	L1ME1	LINE/L1	5993	6179	(0)	1610480
14	20.5	0.0	0.0	chr17	39623212	39623245	(43634196)	+	(TGAA)n	Simple_repeat	1	34	(0)	1610481
388	30.2	10.8	1.4	chr17	39623691	39623879	(43633562)	C	MIRb	SINE/MIR	(56)	212	6	1610482
184	30.4	2.8	4.2	chr17	41665811	41665882	(41591559)	+	L2c	LINE/L2	3316	3386	(1)	1613989
2244	11.0	2.3	0.0	chr17	42937328	42937627	(40319814)	+	AluSx1	SINE/Alu	1	307	(5)	1616688
840	15.8	0.8	0.0	chr17	42938065	42938191	(40319250)	+	FLAM_A	SINE/Alu	1	128	(14)	1616689
1763	15.2	0.4	2.8	chr17	42938195	42938477	(40318964)	+	AluJr4	SINE/Alu	14	289	(23)	1616690
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
2294	9.5	0.0	1.0	chr17	43483020	43483323	(39774118)	C	AluSz6	SINE/Alu	(11)	301	1	1617943
355	23.2	22.1	1.3	chr17	43483338	43483494	(39773947)	C	MIRb	SINE/MIR	(2)	266	68	1617944
1179	24.6	11.4	2.0	chr17	43846513	43846956	(39410485)	C	Charlie4a	DNA/hAT-Charlie	(16)	492	2	1618716
23	16.1	4.5	2.9	chr17	43938408	43938473	(39318968)	+	GA-rich	Low_complexity	1	69	(0)	1618888
520	25.5	11.5	1.8	chr17	44095107	44095337	(39162104)	C	MIR	SINE/MIR	(26)	236	5	1619219
2632	1.7	0.0	0.0	chr17	44329221	44329534	(38927907)	C	AluYb8	SINE/Alu	(0)	318	1	1619707
15	13.9	3.1	0.0	chr17	44350886	44350917	(38906524)	+	(GGCT)n	Simple_repeat	1	33	(0)	1619766
13	18.9	0.0	0.0	chr17	44363653	44363682	(38893759)	+	(AGC)n	Simple_repeat	1	30	(0)	1619784
24	19.9	4.2	5.0	chr17	44363747	44363841	(38893600)	+	(GCTCCC)n	Simple_repeat	1	99	(0)	1619785
18	4.2	0.0	0.0	chr17	44557716	44557740	(38699701)	+	(CTG)n	Simple_repeat	1	25	(0)	1620211
15	18.9	6.8	3.2	chr17	44557741	44557749	(38699692)	+	(GCC)n	Simple_repeat	45	63	(0)	1620210
1049	10.5	0.7	0.0	chr17	47500916	47501067	(35756374)	+	L1PB3	LINE/L1	6002	6154	(0)	1626124
27	0.0	0.0	0.0	chr17	48636528	48636553	(34620888)	+	(T)n	Simple_repeat	1	26	(0)	1628167
426	31.6	3.6	5.9	chr17	48636898	48637099	(34620342)	C	MIRc	SINE/MIR	(50)	218	22	1628168
246	27.3	14.7	0.0	chr17	48831493	48831591	(34425850)	+	MIR3	SINE/MIR	78	193	(15)	1628594
2019	13.4	2.9	0.0	chr17	48954012	48954346	(34303095)	C	LTR47B4	LTR/ERVL	(89)	345	1	1628907
981	14.4	0.6	1.2	chr17	48954347	48954515	(34302926)	C	ERVL47-int	LTR/ERVL	(0)	5246	5079	1628907
798	10.4	0.9	0.0	chr17	48954520	48954634	(34302807)	C	ERVL47-int	LTR/ERVL	(2625)	2621	2506	1628907
12	27.2	2.0	2.0	chr17	49496637	49496686	(33760755)	+	(CGCGC)n	Simple_repeat	1	51	(0)	1630054
183	27.4	6.4	1.4	chr17	49556636	49556709	(33700732)	C	MIR3	SINE/MIR	(25)	183	106	1630150
18	0.0	0.0	0.0	chr17	49575651	49575672	(33681769)	+	(GCC)n	Simple_repeat	1	22	(0)	1630189
212	38.9	2.4	0.7	chr17	50094221	50094364	(33163077)	+	L2b	LINE/L2	3222	3352	(35)	1631151
16	20.9	4.1	5.3	chr17	50273238	50273310	(32984131)	+	(CCGCGC)n	Simple_repeat	1	76	(0)	1631442
13	22.1	2.3	2.2	chr17	50478731	50478775	(32778666)	+	G-rich	Low_complexity	1	45	(0)	1631863
17	14.0	0.0	0.0	chr17	50479052	50479083	(32778358)	+	(GTGGCC)n	Simple_repeat	1	32	(0)	1631864
247	26.3	12.6	1.7	chr17	50950747	50950866	(32306575)	+	L2	LINE/L2	2446	2580	(839)	1632799
426	28.1	13.8	2.9	chr17	56715778	56715982	(26541459)	+	MIRb	SINE/MIR	38	268	(0)	1641819
14	31.4	2.1	4.2	chr17	57085116	57085208	(26172233)	+	G-rich	Low_complexity	1	95	(0)	1642628
182	22.5	11.2	0.0	chr17	57440852	57440922	(25816519)	C	MIRc	SINE/MIR	(79)	189	110	1643278
312	30.9	9.7	2.6	chr17	57441073	57441225	(25816216)	C	MamSINE1	SINE/tRNA-RTE	(9)	281	117	1643279
247	30.0	5.7	2.9	chr17	57747546	57747648	(25509793)	+	L2b	LINE/L2	3246	3351	(24)	1643762
848	14.1	0.8	1.5	chr17	59848645	59848779	(23408662)	C	FLAM_A	SINE/Alu	(7)	135	2	1648082
1757	13.7	0.0	7.3	chr17	59848848	59849160	(23408281)	C	AluJb	SINE/Alu	(21)	291	2	1648083
1775	17.6	0.7	2.6	chr17	59859035	59859341	(23398100)	C	AluJb	SINE/Alu	(11)	301	1	1648106
2117	9.2	5.5	0.0	chr17	60150391	60150685	(23106756)	+	AluSx	SINE/Alu	1	312	(0)	1648679
11	21.5	6.0	1.9	chr17	61412641	61412690	(21844751)	+	(AGGCAC)n	Simple_repeat	1	53	(0)	1651017
1243	15.4	0.0	0.0	chr17	63889386	63889597	(19367844)	+	AluSx	SINE/Alu	129	312	(0)	1655535
740	29.6	12.2	5.2	chr17	63889603	63890004	(19367437)	C	MamGypLTR3	LTR/Gypsy	(178)	716	278	1655536
15	14.5	5.3	0.0	chr17	64778655	64778692	(18478749)	+	(GCTGC)n	Simple_repeat	1	40	(0)	1657314
274	19.8	23.5	3.6	chr17	64779130	64779266	(18478175)	+	MIR3	SINE/MIR	20	192	(16)	1657315
313	27.5	6.7	3.8	chr17	66914997	66915155	(16342286)	C	MER5A	DNA/hAT-Charlie	(2)	187	24	1661044
1752	15.5	5.2	0.3	chr17	67293140	67293430	(15964011)	C	AluJb	SINE/Alu	(6)	306	1	1661717
2309	11.6	0.0	0.3	chr17	67293978	67294288	(15963153)	+	AluSq2	SINE/Alu	1	310	(3)	1661718
2321	10.7	1.0	0.0	chr17	67800796	67801103	(15456338)	C	AluSx1	SINE/Alu	(1)	311	1	1662826
2346	10.7	0.0	0.0	chr17	68015989	68016298	(15241143)	C	AluSx4	SINE/Alu	(0)	310	1	1663328
229	23.1	18.9	6.5	chr17	68198743	68198887	(15058554)	C	MIRc	SINE/MIR	(108)	160	2	1663728
12	26.2	0.0	2.3	chr17	68199359	68199401	(15058040)	+	(GCCT)n	Simple_repeat	1	43	(0)	1663729
940	26.0	8.0	2.2	chr17	68199736	68200053	(15057388)	+	MER46C	DNA/TcMar-Tigger	1	338	(0)	1663730
24	20.3	0.9	9.2	chr17	68205304	68205411	(15052030)	+	(CGCGCCC)n	Simple_repeat	1	109	(0)	1663741
29	5.8	0.0	0.0	chr17	68205729	68205764	(15051677)	+	(GCCCCG)n	Simple_repeat	1	36	(0)	1663742
16	0.0	0.0	0.0	chr17	71064993	71065010	(12192431)	+	(GC)n	Simple_repeat	1	18	(0)	1668214
22	3.9	0.0	0.0	chr17	71065010	71065036	(12192405)	+	(CA)n	Simple_repeat	1	27	(0)	1668215
9979	10.7	4.8	1.7	chr17	71304472	71306539	(11950902)	+	L1PBa	LINE/L1	634	2910	(3953)	1668590
941	28.5	5.2	3.0	chr17	71764437	71764866	(11492575)	C	MLT1L	LTR/ERVL-MaLR	(4)	606	167	1669276
1363	20.5	14.3	6.3	chr17	72985777	72986203	(10271238)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	1671371
252	20.0	1.8	1.8	chr17	72986385	72986440	(10271001)	+	MER5A1	DNA/hAT-Charlie	51	106	(60)	1671372
627	23.1	1.4	0.7	chr17	72986572	72986715	(10270726)	+	MER5A1	DNA/hAT-Charlie	21	165	(1)	1671373
804	9.9	0.0	0.0	chr17	72986744	72986844	(10270597)	+	AluSz	SINE/Alu	1	101	(211)	1671374
2474	8.2	0.3	0.0	chr17	73047686	73047990	(10209451)	+	AluSz	SINE/Alu	1	306	(6)	1671515
42	0.0	0.0	0.0	chr17	73047991	73048026	(10209415)	+	(AT)n	Simple_repeat	1	36	(0)	1671516
3600	13.7	6.2	0.0	chr17	73048064	73048640	(10208801)	C	L1PA16	LINE/L1	(0)	6166	5552	1671517
60	0.0	0.0	0.0	chr17	73310744	73310794	(9946647)	+	(CA)n	Simple_repeat	1	51	(0)	1672050
548	26.5	1.4	0.0	chr17	73956438	73956573	(9300868)	+	MIR	SINE/MIR	124	261	(1)	1673239
248	25.0	7.5	7.5	chr17	73956565	73956698	(9300743)	C	MIR3	SINE/MIR	(74)	134	1	1673240
976	30.7	6.7	7.8	chr17	74085340	74085880	(9171561)	+	MamGypLTR3a	LTR/Gypsy	437	971	(10)	1673475
295	27.8	8.7	2.5	chr17	74210435	74210552	(9046889)	+	MIRb	SINE/MIR	73	198	(70)	1673696
348	30.1	5.8	7.9	chr17	74437712	74437888	(8819553)	C	Tigger16a	DNA/TcMar-Tigger	(665)	292	120	1674162
1816	15.1	0.7	4.5	chr17	74438016	74438206	(8819235)	C	AluJb	SINE/Alu	(0)	312	139	1674163
54	0.0	0.0	0.0	chr17	74438207	74438252	(8819189)	+	(AT)n	Simple_repeat	1	46	(0)	1674164
2371	10.2	0.0	0.0	chr17	75600898	75601202	(7656239)	C	AluSx3	SINE/Alu	(6)	305	1	1676452
1265	17.9	9.3	3.8	chr17	75601203	75601306	(7656135)	C	AluJr	SINE/Alu	(177)	135	33	1676450
14	26.6	1.5	4.3	chr17	76000679	76000746	(7256695)	+	G-rich	Low_complexity	1	69	(0)	1677208
36	0.0	0.0	0.0	chr17	76182452	76182482	(7074959)	+	(TG)n	Simple_repeat	1	31	(0)	1677517
2248	16.9	3.8	4.2	chr17	76195772	76196222	(7061219)	+	MER66B	LTR/ERV1	7	455	(31)	1677547
1068	23.1	9.2	1.0	chr17	76196232	76196529	(7060912)	+	L1ME3A	LINE/L1	5847	6171	(2)	1677546
2415	7.5	0.0	3.7	chr17	78084610	78084931	(5172510)	C	AluSx1	SINE/Alu	(2)	310	1	1681177
235	27.7	11.1	6.1	chr17	78085258	78085453	(5171988)	+	Tigger15a	DNA/TcMar-Tigger	508	714	(1)	1681178
12	15.3	3.5	0.0	chr17	78361236	78361264	(4896177)	+	GA-rich	Low_complexity	1	30	(0)	1681728
325	35.5	1.6	3.1	chr17	78708411	78708538	(4548903)	C	L2c	LINE/L2	(0)	3387	3262	1682304
32	28.6	0.8	3.2	chr17	79839588	79839712	(3417729)	+	G-rich	Low_complexity	1	126	(0)	1684014
484	30.9	8.3	0.0	chr17	80196307	80196539	(3060902)	C	Charlie13b	DNA/hAT-Charlie	(31)	481	228	1684640
2129	9.8	4.0	2.0	chr17	80361249	80361545	(2895896)	+	AluSx3	SINE/Alu	1	303	(8)	1684938
235	27.3	0.5	0.0	chr17	80980487	80981089	(2276352)	+	(GAGT)n	Simple_repeat	1	606	(0)	1685730
12	18.1	0.0	3.0	chr17	80981125	80981157	(2276284)	+	(CCGCCC)n	Simple_repeat	1	33	(0)	1685731
14	30.7	2.4	3.5	chr17	80981450	80981534	(2275907)	+	(GCTGCC)n	Simple_repeat	1	87	(0)	1685732
15	5.6	0.0	0.0	chr17	81101636	81101654	(2155787)	+	(CA)n	Simple_repeat	1	19	(0)	1685863
1044	24.9	10.5	10.0	chr17	81223885	81224244	(2033197)	C	L1ME1	LINE/L1	(212)	5967	5582	1686008
184	29.6	8.7	1.7	chr17	81230208	81230324	(2027117)	C	L2b	LINE/L2	(209)	3166	3041	1686019
22	6.4	0.0	0.0	chr17	81322865	81322897	(1934544)	+	(CCCTGA)n	Simple_repeat	1	33	(0)	1686123
13	8.8	11.1	0.0	chr17	81400579	81400614	(1856827)	+	(GCGCGG)n	Simple_repeat	1	40	(0)	1686232
17	14.5	2.6	0.0	chr17	81436562	81436600	(1820841)	+	(CCCTGC)n	Simple_repeat	1	40	(0)	1686249
13	20.1	5.0	0.0	chr17	82321578	82321617	(935824)	+	(GCC)n	Simple_repeat	1	42	(0)	1687482
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
16	20.7	2.1	2.1	chr17	82375302	82375348	(882093)	+	(GCGCGG)n	Simple_repeat	1	48	(0)	1687545
2300	5.5	1.9	1.6	chr17	82734722	82735030	(522411)	+	AluY	SINE/Alu	1	310	(1)	1688166
20	22.4	3.1	1.5	chr17	82735524	82735587	(521854)	+	(CCGCC)n	Simple_repeat	1	66	(0)	1688167
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
14	12.6	0.0	7.5	chr18	3448257	3448296	(76924989)	+	(CCTCCTC)n	Simple_repeat	1	40	(0)	1694436
200	2.8	7.2	2.7	chr18	4510685	4511029	(75862256)	+	(GTG)n	Simple_repeat	1	370	(0)	1696090
295	22.9	18.2	0.2	chr18	7452142	7452264	(72921021)	C	MamGypLTR2b	LTR/Gypsy	(51)	871	738	1700127
2445	5.6	0.0	0.0	chr18	12093315	12093599	(68279686)	C	AluY	SINE/Alu	(14)	297	13	1706911
19	16.3	0.0	2.3	chr18	12093693	12093735	(68279550)	+	G-rich	Low_complexity	1	43	(0)	1706912
6289	23.9	2.5	5.7	chr18	12145506	12146109	(68227176)	+	L1PA12	LINE/L1	609	1282	(5699)	1706970
26	3.5	0.0	0.0	chr18	12146110	12146139	(68227146)	+	(AGCAC)n	Simple_repeat	1	30	(0)	1706971
6289	19.0	1.4	2.6	chr18	12146140	12146459	(68226826)	+	L1PA12	LINE/L1	728	1039	(5942)	1706970
5593	25.0	4.6	2.0	chr18	14257023	14258583	(66114702)	+	MSTA-int	LTR/ERVL-MaLR	28	1631	(0)	1710083
10208	10.0	8.7	0.4	chr18	21131575	21133018	(59240267)	C	LTR12C	LTR/ERV1	(0)	1579	5	1711967
14	16.8	5.0	0.0	chr18	21997554	21997593	(58375692)	+	(TCTGTTT)n	Simple_repeat	1	42	(0)	1713703
2313	7.9	0.0	0.0	chr18	22023683	22023960	(58349325)	+	AluSx1	SINE/Alu	1	278	(34)	1713762
606	30.1	7.7	0.4	chr18	22023979	22024208	(58349077)	+	MIR	SINE/MIR	2	249	(13)	1713763
1430	14.7	12.5	2.5	chr18	22282001	22282279	(58091006)	+	AluJb	SINE/Alu	2	312	(0)	1714290
382	36.9	4.3	0.0	chr18	22901105	22901302	(57471983)	+	MLT1O	LTR/ERVL-MaLR	32	238	(304)	1715177
17	21.5	2.0	2.0	chr18	26547020	26547069	(53826216)	+	(TGG)n	Simple_repeat	1	51	(0)	1721096
35	6.7	3.0	2.9	chr18	26548249	26548314	(53824971)	+	(CTC)n	Simple_repeat	1	68	(0)	1721097
2327	10.9	0.3	0.6	chr18	28189121	28189432	(52183853)	C	AluSz	SINE/Alu	(1)	311	1	1723432
2307	25.6	6.8	4.7	chr18	28961192	28961709	(51411576)	C	L1ME2	LINE/L1	(19)	6145	5638	1724409
1669	26.6	15.3	1.1	chr18	28961710	28962363	(51410922)	+	LTR41	LTR/ERVL	1	764	(4)	1724410
13	22.6	0.0	4.4	chr18	31042994	31043038	(49330247)	+	(CCCCG)n	Simple_repeat	1	45	(0)	1727133
36	0.0	0.0	2.6	chr18	31943294	31943331	(48429954)	+	(GCGGGG)n	Simple_repeat	1	38	(0)	1728480
332	27.8	13.2	1.4	chr18	32956555	32956700	(47416585)	+	MIRb	SINE/MIR	89	254	(14)	1730119
16	15.4	4.4	2.1	chr18	32956966	32957010	(47416275)	+	A-rich	Low_complexity	1	47	(0)	1730120
9031	3.7	0.1	0.0	chr18	33861557	33863433	(46509852)	+	L1PA3	LINE/L1	4278	6155	(0)	1731221
7429	13.3	9.7	1.0	chr18	33863434	33864707	(46508578)	C	THE1D-int	LTR/ERVL-MaLR	(181)	1399	3	1731219
10256	20.1	4.2	2.3	chr18	34233621	34233773	(46139512)	+	L1MC	LINE/L1	4135	4291	(1855)	1731675
9399	6.9	14.0	0.1	chr18	34233774	34235133	(46138152)	+	LTR12C	LTR/ERV1	1	1579	(0)	1731677
18	17.7	0.0	0.0	chr18	35143702	35143733	(45229552)	+	A-rich	Low_complexity	1	32	(0)	1732895
1569	16.6	0.7	8.4	chr18	35232625	35232755	(45140530)	+	AluJb	SINE/Alu	6	123	(189)	1733023
44	0.0	0.0	0.0	chr18	35232756	35232793	(45140492)	+	(AC)n	Simple_repeat	1	38	(0)	1733024
1569	16.6	0.7	8.4	chr18	35232794	35232969	(45140316)	+	AluJb	SINE/Alu	124	289	(23)	1733023
868	23.8	8.2	5.0	chr18	35386658	35386988	(44986297)	+	LTR41	LTR/ERVL	88	515	(253)	1733240
957	24.9	4.7	1.3	chr18	35386992	35387219	(44986066)	+	ERVL-E-int	LTR/ERVL	3960	4195	(1472)	1733242
4323	26.2	3.5	2.0	chr18	35387235	35388405	(44984880)	+	ERVL-E-int	LTR/ERVL	4168	5355	(312)	1733242
253	17.4	0.0	4.2	chr18	35580690	35580761	(44792524)	C	MLT1N2	LTR/ERVL-MaLR	(13)	549	481	1733544
1283	33.3	7.7	4.4	chr18	35879078	35880365	(44492920)	+	HUERS-P3-int	LTR/ERV1	7101	8433	(3)	1733916
1590	17.6	4.8	5.1	chr18	36056947	36057242	(44316043)	+	AluJb	SINE/Alu	15	309	(3)	1734218
12	25.0	0.0	4.3	chr18	37275065	37275110	(43098175)	+	(CCGCC)n	Simple_repeat	1	46	(0)	1735833
34	24.9	0.0	7.5	chr18	37275310	37275456	(43097829)	+	G-rich	Low_complexity	1	147	(0)	1735834
367	25.0	4.0	3.6	chr18	37322814	37322953	(43050332)	C	MIRc	SINE/MIR	(64)	204	59	1735888
297	32.4	6.5	5.0	chr18	39841042	39841267	(40532018)	C	MIRc	SINE/MIR	(43)	225	4	1739236
478	23.9	6.9	3.9	chr18	47997185	47997426	(32375859)	+	MamGypLTR3a	LTR/Gypsy	44	329	(652)	1751141
369	32.4	8.1	3.9	chr18	47997663	47997945	(32375340)	+	MamGypLTR3a	LTR/Gypsy	682	977	(4)	1751141
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
363	23.8	0.0	1.2	chr18	59402832	59402912	(20970373)	C	MIRc	SINE/MIR	(107)	161	82	1768893
588	10.8	2.4	0.0	chr18	63022788	63022870	(17350415)	C	AluJo	SINE/Alu	(227)	85	1	1774423
281	17.9	8.2	3.7	chr18	63511858	63511938	(16861347)	C	L3	LINE/CR1	(1042)	3057	2973	1775216
292	33.0	4.3	5.4	chr18	74476028	74476213	(5897072)	C	LTR78B	LTR/ERV1	(1112)	184	1	1789931
2257	18.4	6.3	2.9	chr18	74476431	74476916	(5896369)	+	MLT1D	LTR/ERVL-MaLR	1	504	(1)	1789932
12	22.7	0.0	0.0	chr18	76401958	76401989	(3971296)	+	(TGCATG)n	Simple_repeat	1	32	(0)	1792108
12	10.7	6.1	2.9	chr18	76802268	76802300	(3570985)	+	(GGAGCT)n	Simple_repeat	1	35	(0)	1792671
1445	11.6	0.0	0.5	chr18	76802407	76802604	(3570681)	+	AluSx	SINE/Alu	1	197	(115)	1792672
17	23.2	0.0	0.0	chr18	77021266	77021301	(3351984)	+	(CA)n	Simple_repeat	1	36	(0)	1792958
288	21.4	0.5	0.8	chr18	77650152	77650761	(2722524)	+	(ATCC)n	Simple_repeat	1	613	(0)	1793754
190	23.1	14.5	4.4	chr18	78914434	78914501	(1458784)	C	OldhAT1	DNA/hAT-Ac	(141)	2707	2632	1794981
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
20	18.5	2.3	8.0	chr18	79864068	79864153	(509132)	+	G-rich	Low_complexity	1	88	(0)	1795849
2938	10.7	1.1	0.9	chr18	80262297	80262869	(110416)	+	TAR1	Satellite/telo	645	1218	(893)	1796345
436	0.0	0.0	1.3	chr18	80262892	80263285	(110000)	+	(GTTAGG)n	Simple_repeat	1	394	(0)	1796346
207	27.1	5.1	3.9	chr19	384148	384250	(58233366)	C	MIRc	SINE/MIR	(81)	187	87	1796843
343	31.4	8.9	0.0	chr19	384550	384734	(58232882)	+	MER113	DNA/hAT-Charlie	75	277	(244)	1796844
562	26.1	7.3	1.6	chr19	480035	480279	(58137337)	C	L2b	LINE/L2	(195)	3180	2921	1796988
4343	6.8	0.0	9.4	chr19	506329	506438	(58111178)	C	LTR10C	LTR/ERV1	(487)	104	1	1797045
1459	8.1	0.0	0.0	chr19	549987	550172	(58067444)	C	AluSx3	SINE/Alu	(125)	186	1	1797122
352	23.1	4.4	0.9	chr19	550342	550450	(58067166)	C	L1MB7	LINE/L1	(0)	6184	6072	1797123
715	25.4	8.5	6.6	chr19	737491	738101	(57879515)	C	L2a	LINE/L2	(188)	3238	2592	1797493
1073	8.0	0.0	0.7	chr19	738109	738245	(57879371)	+	AluSz	SINE/Alu	1	136	(176)	1797494
17	15.4	2.1	4.2	chr19	812522	812568	(57805048)	+	(CCGCCCC)n	Simple_repeat	1	48	(0)	1797647
14	22.2	4.4	4.2	chr19	812680	812747	(57804869)	+	(CCCGGCG)n	Simple_repeat	1	71	(0)	1797648
42	9.9	0.0	0.0	chr19	813343	813407	(57804209)	+	(CCT)n	Simple_repeat	1	65	(0)	1797649
2320	9.9	0.3	0.0	chr19	924389	924691	(57692925)	C	AluSx	SINE/Alu	(8)	304	1	1797901
213	31.2	0.0	0.0	chr19	925015	925078	(57692538)	+	MIR	SINE/MIR	108	171	(91)	1797902
406	23.9	3.7	6.1	chr19	1007384	1007548	(57610068)	+	MER20	DNA/hAT-Charlie	1	161	(58)	1798068
19	10.9	0.0	6.7	chr19	1007781	1007825	(57609791)	+	G-rich	Low_complexity	1	45	(0)	1798069
190	31.9	0.0	0.0	chr19	1503797	1503843	(57113773)	+	L2a	LINE/L2	3377	3423	(3)	1798893
11	18.4	2.4	4.8	chr19	1508287	1508327	(57109289)	+	G-rich	Low_complexity	1	42	(0)	1798898
239	29.6	9.1	0.6	chr19	1508661	1508757	(57108859)	C	MIR3	SINE/MIR	(85)	123	28	1798899
30	0.0	0.0	0.0	chr19	1508780	1508807	(57108809)	+	(CATT)n	Simple_repeat	1	28	(0)	1798900
12	30.7	3.5	0.0	chr19	1774916	1774972	(56842644)	+	(TCTCTG)n	Simple_repeat	1	59	(0)	1799491
13	8.5	4.0	0.0	chr19	1775041	1775065	(56842551)	+	(CCT)n	Simple_repeat	1	26	(0)	1799492
19	6.7	3.1	0.0	chr19	1775119	1775150	(56842466)	+	(CCCG)n	Simple_repeat	1	33	(0)	1799493
12	18.1	0.0	3.0	chr19	1775156	1775188	(56842428)	+	(GCAGGA)n	Simple_repeat	1	33	(0)	1799494
12	17.5	3.1	0.0	chr19	1775630	1775661	(56841955)	+	(CCTC)n	Simple_repeat	1	33	(0)	1799495
8469	4.5	0.9	0.3	chr19	2871676	2872676	(55744940)	C	LTR13	LTR/ERVK	(0)	1007	1	1801822
330	32.4	4.2	0.0	chr19	3075918	3076053	(55541563)	C	MER3	DNA/hAT-Charlie	(65)	144	3	1802338
252	24.4	10.9	1.2	chr19	3076260	3076342	(55541274)	C	L2b	LINE/L2	(13)	3362	3271	1802339
669	23.6	4.5	0.5	chr19	3076344	3076535	(55541081)	C	MER20	DNA/hAT-Charlie	(19)	200	1	1802340
2021	13.4	0.0	3.9	chr19	3429298	3429603	(55188013)	+	AluJo	SINE/Alu	2	295	(17)	1803261
309	29.0	10.8	0.0	chr19	3429732	3429855	(55187761)	+	L2b	LINE/L2	2933	3071	(348)	1803262
1799	16.4	1.3	3.1	chr19	3682399	3682716	(54934900)	+	AluJo	SINE/Alu	1	312	(0)	1803769
894	14.8	1.8	0.0	chr19	3682724	3682885	(54934731)	+	MLT1F	LTR/ERVL-MaLR	320	484	(64)	1803770
290	28.3	18.2	1.2	chr19	3682929	3683264	(54934352)	+	L2b	LINE/L2	2940	3345	(30)	1803771
442	22.6	7.3	0.0	chr19	4445837	4445951	(54171665)	C	MIR	SINE/MIR	(118)	144	21	1805598
12	21.1	0.0	0.0	chr19	4446456	4446484	(54171132)	+	(CCGCC)n	Simple_repeat	1	29	(0)	1805599
14	19.6	2.7	0.0	chr19	4523613	4523649	(54093967)	+	(CCCATC)n	Simple_repeat	1	38	(0)	1805776
324	33.2	14.1	0.0	chr19	4809845	4810064	(53807552)	+	L2c	LINE/L2	3031	3286	(101)	1806530
289	35.4	2.3	1.6	chr19	5515564	5515692	(53101924)	C	MLT1K	LTR/ERVL-MaLR	(428)	167	38	1808207
499	32.2	15.5	6.8	chr19	5515759	5516344	(53101272)	C	MamGypLTR3a	LTR/Gypsy	(119)	862	217	1808211
15	24.9	1.4	5.7	chr19	5567588	5567656	(53049960)	+	(CGCCCC)n	Simple_repeat	1	70	(0)	1808366
12	11.1	0.0	8.6	chr19	5567631	5567665	(53049951)	+	(CCCCA)n	Simple_repeat	1	35	(0)	1808367
13	11.2	3.2	3.1	chr19	5804091	5804121	(52813495)	+	(CAGCC)n	Simple_repeat	1	32	(0)	1808887
2327	11.5	0.0	0.3	chr19	5823135	5823446	(52794170)	+	AluSx1	SINE/Alu	1	311	(1)	1808944
181	29.7	10.8	0.0	chr19	5823450	5823523	(52794093)	C	L2b	LINE/L2	(279)	3108	3026	1808941
722	25.9	3.7	0.8	chr19	5823729	5823966	(52793650)	+	L2b	LINE/L2	2937	3181	(194)	1808945
2218	6.3	4.6	0.0	chr19	6863212	6863482	(51754134)	C	AluSq2	SINE/Alu	(29)	284	1	1811398
284	10.5	0.3	0.5	chr19	6863519	6863562	(51754054)	C	MamTip2	DNA/hAT-Tip100	(154)	151	113	1811399
1237	5.0	0.0	0.0	chr19	7149056	7149196	(51468420)	C	AluY	SINE/Alu	(160)	151	11	1812114
2490	8.2	0.3	0.0	chr19	7149540	7149845	(51467771)	+	AluSp	SINE/Alu	1	307	(6)	1812115
14	16.7	4.8	2.3	chr19	7918124	7918165	(50699451)	+	(AGGT)n	Simple_repeat	1	44	(0)	1813973
181	16.2	0.0	7.5	chr19	7918188	7918214	(50699402)	C	L2a	LINE/L2	(27)	3399	3374	1813974
34	2.5	2.5	0.0	chr19	7918215	7918254	(50699362)	+	(GTTT)n	Simple_repeat	1	41	(0)	1813975
2344	5.7	0.4	0.0	chr19	7918255	7918535	(50699081)	C	AluSp	SINE/Alu	(31)	282	1	1813976
7235	8.3	2.9	0.7	chr19	9205385	9206369	(49411247)	+	LTR13	LTR/ERVK	1	1007	(0)	1817029
2401	18.1	2.1	2.1	chr19	9552969	9553454	(49064162)	+	MER66B	LTR/ERV1	1	486	(0)	1817629
938	18.8	0.0	3.0	chr19	9553455	9553505	(49064111)	+	AluJb	SINE/Alu	242	288	(24)	1817628
253	27.1	0.9	5.3	chr19	9553507	9553619	(49063997)	C	MER4-int	LTR/ERV1	(2543)	4096	3989	1817630
11796	16.5	3.7	1.5	chr19	9668401	9669545	(48948071)	+	L1MA4	LINE/L1	4597	5754	(728)	1817880
1073	15.8	2.4	19.7	chr19	9669546	9669734	(48947882)	+	AluJr4	SINE/Alu	4	134	(178)	1817885
49	0.0	0.0	0.0	chr19	9669735	9669776	(48947840)	+	(CA)n	Simple_repeat	1	42	(0)	1817886
2211	14.0	0.0	0.0	chr19	9669781	9670088	(48947528)	+	AluSz	SINE/Alu	2	309	(3)	1817887
13	15.8	2.7	2.6	chr19	9819587	9819623	(48797993)	+	(GGCGG)n	Simple_repeat	1	38	(0)	1818191
16	21.6	3.1	4.5	chr19	9835271	9835334	(48782282)	+	(GGCGGC)n	Simple_repeat	1	66	(0)	1818235
2036	8.4	0.4	4.5	chr19	10228019	10228305	(48389311)	+	AluSx	SINE/Alu	1	275	(37)	1819212
284	33.0	19.6	2.0	chr19	10228987	10229283	(48388333)	+	L2a	LINE/L2	2720	3081	(338)	1819214
2301	10.5	0.0	0.0	chr19	10229296	10229589	(48388027)	C	AluSx1	SINE/Alu	(18)	294	1	1819215
74	18.4	4.3	2.6	chr19	10871450	10871775	(47745841)	+	(CGG)n	Simple_repeat	1	331	(0)	1820887
12	24.8	0.0	0.0	chr19	10871970	10872003	(47745613)	+	G-rich	Low_complexity	1	34	(0)	1820888
494	32.7	10.2	0.3	chr19	11482871	11483152	(47134464)	+	L2a	LINE/L2	2967	3279	(147)	1822442
2335	8.0	0.3	0.0	chr19	11596928	11597239	(47020377)	+	AluSq2	SINE/Alu	1	313	(0)	1822764
876	22.2	14.1	2.4	chr19	12400310	12400775	(46216841)	+	LTR26E	LTR/ERV1	1	593	(29)	1824373
27	0.0	0.0	0.0	chr19	12401542	12401567	(46216049)	+	(T)n	Simple_repeat	1	26	(0)	1824374
36	0.0	0.0	0.0	chr19	12401570	12401600	(46216016)	+	(GA)n	Simple_repeat	1	31	(0)	1824375
2029	8.1	2.5	1.8	chr19	12401601	12401872	(46215744)	C	AluSg	SINE/Alu	(35)	275	2	1824376
16	18.5	7.0	0.0	chr19	12647383	12647425	(45970191)	+	(TC)n	Simple_repeat	1	46	(0)	1824918
12	22.8	0.0	7.5	chr19	12647999	12648051	(45969565)	+	G-rich	Low_complexity	1	53	(0)	1824919
1003	23.8	10.4	4.3	chr19	12965023	12965417	(45652199)	C	L2	LINE/L2	(537)	2882	2461	1825650
391	30.8	14.4	0.8	chr19	12965786	12965915	(45651701)	+	L2a	LINE/L2	3115	3268	(158)	1825651
1727	12.1	6.8	4.9	chr19	12965916	12966091	(45651525)	C	AluSz	SINE/Alu	(1)	311	144	1825652
2435	7.9	0.3	0.0	chr19	13194350	13194652	(45422964)	+	AluSp	SINE/Alu	3	306	(7)	1826102
2145	13.3	0.0	1.0	chr19	13194843	13195151	(45422465)	C	AluSz	SINE/Alu	(4)	308	3	1826103
18	11.8	2.6	2.5	chr19	14551811	14551849	(44065767)	+	(TTTTG)n	Simple_repeat	1	40	(0)	1829788
35	38.8	0.0	2.2	chr19	14551850	14551972	(44065644)	+	(TTCT)n	Simple_repeat	3	162	(0)	1829789
7106	9.6	2.3	1.2	chr19	14888380	14889322	(43728294)	C	LTR13_	LTR/ERVK	(0)	954	1	1830565
1068	23.1	5.7	0.0	chr19	15101485	15101748	(43515868)	C	LTR16C	LTR/ERVL	(0)	489	210	1831121
1952	16.9	0.0	0.7	chr19	15101924	15102219	(43515397)	+	AluJr4	SINE/Alu	1	294	(18)	1831122
186	13.9	2.7	0.0	chr19	16416906	16416941	(42200675)	C	MIR3	SINE/MIR	(54)	154	118	1833887
2229	12.3	0.0	1.3	chr19	16631103	16631418	(41986198)	+	AluSx1	SINE/Alu	1	312	(0)	1834297
355	32.5	0.0	7.5	chr19	16631535	16631707	(41985909)	+	MamGypLTR3	LTR/Gypsy	508	667	(227)	1834298
2355	8.4	1.0	0.0	chr19	16631872	16632167	(41985449)	C	AluSg	SINE/Alu	(11)	299	1	1834299
801	7.4	21.3	1.5	chr19	16771832	16771966	(41845650)	C	AluSx	SINE/Alu	(12)	300	132	1834731
437	13.4	2.4	3.5	chr19	16771967	16772051	(41845565)	C	L1MC1	LINE/L1	(0)	6333	6250	1834732
1871	14.8	0.3	0.0	chr19	16772086	16772376	(41845240)	+	AluJo	SINE/Alu	3	294	(18)	1834733
1274	16.2	3.0	3.8	chr19	16895644	16895881	(41721735)	+	Tigger4a	DNA/TcMar-Tigger	1	236	(0)	1835029
25	8.7	0.0	0.0	chr19	16895885	16895903	(41721713)	+	(GC)n	Simple_repeat	1	19	(0)	1835030
29	0.0	0.0	0.0	chr19	16895904	16895928	(41721688)	+	(CA)n	Simple_repeat	1	25	(0)	1835031
25	8.7	0.0	0.0	chr19	16895929	16895946	(41721670)	+	(GC)n	Simple_repeat	2	19	(0)	1835032
13	13.6	2.9	2.9	chr19	18869175	18869208	(39748408)	+	(CCGCGC)n	Simple_repeat	1	35	(0)	1839726
15	14.1	0.0	3.0	chr19	18869230	18869262	(39748354)	+	(GCC)n	Simple_repeat	1	33	(0)	1839727
20	9.7	4.2	4.0	chr19	19257851	19257905	(39359711)	+	(CCCCAG)n	Simple_repeat	1	55	(0)	1840635
322	30.3	0.0	4.8	chr19	19367263	19367366	(39250250)	C	L2c	LINE/L2	(2)	3385	3287	1840836
356	26.3	4.8	0.0	chr19	19777091	19777208	(38840408)	+	HERVL40-int	LTR/ERVL	3762	3885	(1645)	1841600
2044	20.1	2.7	3.1	chr19	21000405	21000893	(37616723)	C	MER57E3	LTR/ERV1	(0)	487	1	1843364
1642	18.9	3.1	1.3	chr19	21156370	21156754	(37460862)	C	L1PREC2	LINE/L1	(0)	6160	5769	1843602
1881	20.9	2.5	7.1	chr19	21463378	21463449	(37154167)	+	MER57E3	LTR/ERV1	416	485	(2)	1844061
2461	19.8	2.6	7.3	chr19	21573696	21574055	(37043561)	C	MER57-int	LTR/ERV1	(254)	7283	6918	1844237
666	17.0	0.9	0.0	chr19	21574056	21574161	(37043455)	+	AluJb	SINE/Alu	181	287	(25)	1844240
38	4.8	0.0	0.0	chr19	21574163	21574206	(37043410)	+	(GCAAC)n	Simple_repeat	1	44	(0)	1844241
17	12.0	0.0	2.6	chr19	21574260	21574275	(37043341)	+	(AACCAT)n	Simple_repeat	1	16	(0)	1844242
2121	11.6	0.0	0.7	chr19	21574276	21574567	(37043049)	C	AluSg7	SINE/Alu	(14)	295	6	1844243
2499	16.5	1.0	0.2	chr19	21750132	21750610	(36867006)	+	L1P3	LINE/L1	3420	3902	(2244)	1844487
2233	9.4	0.3	0.0	chr19	23686338	23686625	(34930991)	C	AluSq2	SINE/Alu	(24)	289	1	1847041
2721	14.5	0.6	8.5	chr19	23686626	23686677	(34930939)	+	MER57E3	LTR/ERV1	436	487	(0)	1847040
17	4.0	0.0	3.6	chr19	29694704	29694731	(28922885)	+	(GGCCT)n	Simple_repeat	1	28	(0)	1850651
301	18.9	7.8	7.8	chr19	33132837	33132877	(25484739)	+	L1MEg	LINE/L1	1842	1881	(4203)	1856247
2050	14.1	1.6	1.6	chr19	33132878	33133157	(25484459)	+	AluJo	SINE/Alu	1	282	(30)	1856248
245	27.9	17.9	3.0	chr19	33143855	33144090	(25473526)	C	MamGypLTR3	LTR/Gypsy	(4)	890	612	1856278
2431	8.1	0.0	0.0	chr19	33144203	33144499	(25473117)	C	AluSx	SINE/Alu	(15)	297	1	1856279
322	35.6	8.0	0.0	chr19	35090684	35090832	(23526784)	C	MIR	SINE/MIR	(0)	262	101	1859690
32	12.8	0.0	0.0	chr19	35958820	35958872	(22658744)	+	(AGGG)n	Simple_repeat	1	53	(0)	1861551
2477	6.8	0.3	0.7	chr19	36190295	36190603	(22427013)	+	AluSp	SINE/Alu	1	308	(5)	1862078
597	23.6	3.2	8.1	chr19	36190604	36190694	(22426922)	+	MLT1D	LTR/ERVL-MaLR	106	188	(317)	1862077
2386	9.1	0.0	2.8	chr19	36190701	36191020	(22426596)	+	AluSz	SINE/Alu	1	311	(1)	1862079
54	42.6	0.3	0.0	chr19	36245991	36246274	(22371342)	+	(GT)n	Simple_repeat	1	285	(0)	1862217
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
26	23.7	3.8	3.6	chr19	36272210	36272218	(22345398)	+	(CTGTCT)n	Simple_repeat	67	110	(0)	1862255
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
1661	18.7	5.3	0.4	chr19	36516314	36516580	(22101036)	+	AluJr	SINE/Alu	1	281	(31)	1862702
2577	8.4	0.0	0.0	chr19	36516581	36516877	(22100739)	C	AluYj4	SINE/Alu	(13)	298	1	1862703
19	21.8	0.0	2.2	chr19	36916623	36916667	(21700949)	+	(TG)n	Simple_repeat	1	45	(0)	1863509
5873	14.3	3.3	5.7	chr19	37227520	37228541	(21389075)	C	LTR13	LTR/ERVK	(8)	999	3	1864068
11512	1.7	0.0	2.1	chr19	37288824	37290419	(21327197)	C	SST1	Satellite/centr	(0)	1563	1	1864177
2410	7.1	0.0	3.5	chr19	37468494	37468804	(21148812)	C	AluSx3	SINE/Alu	(10)	301	2	1864483
2342	10.3	0.6	0.3	chr19	38243603	38243913	(20373703)	+	AluSq2	SINE/Alu	2	313	(0)	1866205
28	29.3	0.0	0.0	chr19	38243914	38243976	(20373640)	+	A-rich	Low_complexity	33	95	(0)	1866206
1915	13.8	3.8	0.0	chr19	38244215	38244496	(20373120)	C	AluJr	SINE/Alu	(19)	293	1	1866207
343	28.6	18.4	1.8	chr19	40165239	40165523	(18452093)	+	L2	LINE/L2	2550	2892	(527)	1870371
19	18.9	0.0	0.0	chr19	40165877	40165912	(18451704)	+	(T)n	Simple_repeat	1	36	(0)	1870372
21	24.2	2.2	5.4	chr19	40513021	40513111	(18104505)	+	(GGC)n	Simple_repeat	1	93	(0)	1871282
184	26.8	15.7	1.1	chr19	40519252	40519338	(18098278)	C	MIRb	SINE/MIR	(118)	150	49	1871303
29	0.0	0.0	0.0	chr19	41646839	41646866	(16970750)	+	(TATTT)n	Simple_repeat	1	28	(0)	1873703
417	28.4	3.5	0.0	chr19	42034557	42034665	(16582951)	C	L2a	LINE/L2	(0)	3426	3314	1874426
227	31.6	4.8	3.0	chr19	42034874	42034974	(16582642)	+	L2b	LINE/L2	3271	3373	(2)	1874421
2258	8.6	2.7	0.7	chr19	42034989	42035280	(16582336)	C	AluSp	SINE/Alu	(15)	298	1	1874427
31	0.0	0.0	0.0	chr19	42370844	42370872	(16246744)	+	(G)n	Simple_repeat	1	29	(0)	1875128
7927	7.9	0.4	0.0	chr19	42776509	42777511	(15840105)	C	LTR13	LTR/ERVK	(0)	1007	1	1875773
7919	7.2	1.4	0.0	chr19	43210290	43211282	(15406334)	C	LTR13	LTR/ERVK	(0)	1007	1	1876391
7791	8.7	0.2	0.1	chr19	43274230	43275235	(15342381)	C	LTR13	LTR/ERVK	(0)	1007	1	1876460
22291	28.8	3.9	4.0	chr19	43314474	43317093	(15300523)	C	HERVIP10F-int	LTR/ERV1	(5185)	2552	24	1876499
1122	17.2	4.6	1.4	chr19	43317133	43317344	(15300272)	C	LTR10C	LTR/ERV1	(18)	573	355	1876499
362	28.8	6.0	2.5	chr19	43950771	43950930	(14666686)	+	L2	LINE/L2	632	797	(2622)	1877971
296	32.5	3.0	0.6	chr19	44113744	44113907	(14503709)	+	MIR	SINE/MIR	69	236	(26)	1878225
140	23.4	1.2	1.5	chr19	44582590	44582926	(14034690)	+	GA-rich	Low_complexity	1	341	(0)	1879041
420	26.7	1.6	7.2	chr19	44583151	44583205	(14034411)	+	L1ME3Cz	LINE/L1	6	54	(943)	1879042
11	25.1	2.2	2.2	chr19	44753586	44753630	(13863986)	+	(ACCGGC)n	Simple_repeat	1	46	(0)	1879532
15	4.7	0.0	0.0	chr19	45152511	45152532	(13465084)	+	(CTG)n	Simple_repeat	1	22	(0)	1880570
827	14.2	0.0	0.8	chr19	45439416	45439542	(13178074)	+	FLAM_C	SINE/Alu	1	126	(17)	1881321
26	11.9	0.0	6.3	chr19	45439543	45439575	(13178041)	+	(AAT)n	Simple_repeat	2	31	(0)	1881322
25	14.3	3.6	1.7	chr19	45498528	45498583	(13119033)	+	GA-rich	Low_complexity	1	58	(0)	1881471
12	13.3	2.7	5.3	chr19	45498864	45498900	(13118716)	+	(GCGAGC)n	Simple_repeat	1	38	(0)	1881472
2165	10.6	1.6	0.3	chr19	45558052	45558354	(13059262)	+	AluSq	SINE/Alu	1	307	(6)	1881632
13422	9.1	10.2	0.7	chr19	46049333	46051263	(12566353)	+	L1PBa	LINE/L1	635	2736	(4127)	1882892
2374	8.4	0.3	0.3	chr19	46280391	46280687	(12336929)	+	AluSp	SINE/Alu	2	298	(15)	1883261
1341	11.2	0.0	0.0	chr19	46280688	46280865	(12336751)	+	AluSc8	SINE/Alu	133	310	(1)	1883262
16	17.0	0.0	0.0	chr19	46281010	46281042	(12336574)	+	(TTA)n	Simple_repeat	1	33	(0)	1883263
1722	18.7	0.7	0.7	chr19	46281043	46281331	(12336285)	C	AluJr	SINE/Alu	(23)	289	1	1883264
1960	13.8	1.0	2.0	chr19	46281359	46281662	(12335954)	+	AluJo	SINE/Alu	1	301	(11)	1883265
410	31.6	0.6	0.0	chr19	46757310	46757437	(11860179)	+	MIR	SINE/MIR	4	137	(131)	1884453
251	40.0	0.0	1.7	chr19	47436635	47436751	(11180865)	+	MIR3	SINE/MIR	34	148	(60)	1886156
16	18.8	4.0	1.9	chr19	47457093	47457142	(11160474)	+	(CGCCCT)n	Simple_repeat	1	52	(0)	1886212
13	10.4	2.9	5.6	chr19	47457597	47457631	(11159985)	+	(GCGG)n	Simple_repeat	1	36	(0)	1886213
622	9.6	4.6	0.0	chr19	48107378	48107460	(10510156)	+	AluSz	SINE/Alu	2	88	(224)	1887963
4238	11.4	5.7	3.4	chr19	48107461	48108186	(10509430)	+	LTR13	LTR/ERVK	261	1003	(4)	1887964
15	22.3	2.0	2.0	chr19	48398571	48398619	(10218997)	+	(CCGCGG)n	Simple_repeat	1	50	(0)	1888659
19	31.0	1.1	3.2	chr19	48398869	48398960	(10218656)	+	G-rich	Low_complexity	1	93	(0)	1888660
14	19.1	8.7	2.7	chr19	48443197	48443265	(10174351)	+	(GCCGTC)n	Simple_repeat	1	75	(0)	1888783
4711	5.1	0.3	3.4	chr19	48787432	48787957	(9829659)	C	LTR10C	LTR/ERV1	(64)	527	2	1889604
1193	13.0	23.5	0.0	chr19	48788039	48788269	(9829347)	C	AluSx1	SINE/Alu	(10)	302	1	1889607
18	7.6	0.0	0.0	chr19	48788399	48788426	(9829190)	+	(ATTT)n	Simple_repeat	1	28	(0)	1889608
54	0.0	0.0	0.0	chr19	48788497	48788542	(9829074)	+	(CA)n	Simple_repeat	1	46	(0)	1889609
211	28.3	0.0	0.0	chr19	48826950	48827009	(9790607)	+	L2a	LINE/L2	2487	2546	(873)	1889715
2297	8.4	0.7	0.7	chr19	48827046	48827341	(9790275)	C	AluSx1	SINE/Alu	(15)	297	2	1889716
229	26.2	19.2	3.1	chr19	48971103	48971232	(9646384)	C	MIRb	SINE/MIR	(13)	255	100	1890085
8515	4.4	1.4	0.0	chr19	49074734	49075726	(9541890)	+	LTR13	LTR/ERVK	1	1007	(0)	1890309
2005	13.8	0.7	2.0	chr19	49225764	49226068	(9391548)	C	AluJo	SINE/Alu	(10)	302	2	1890653
912	29.6	9.3	5.6	chr19	49226069	49226252	(9391364)	+	HERVL40-int	LTR/ERVL	2923	3119	(2411)	1890646
1265	28.1	6.1	3.6	chr19	49226267	49226414	(9391202)	+	HERVL40-int	LTR/ERVL	3874	4021	(1509)	1890646
2080	10.7	3.3	0.0	chr19	49226415	49226704	(9390912)	C	AluSz	SINE/Alu	(12)	300	1	1890654
8034	6.3	1.3	0.2	chr19	49266236	49267229	(9350387)	+	LTR13	LTR/ERVK	3	1007	(0)	1890753
249	26.0	1.4	4.0	chr19	49403460	49403535	(9214081)	C	MLT1J	LTR/ERVL-MaLR	(339)	173	100	1891041
34	2.6	2.6	0.0	chr19	50356957	50356995	(8260621)	+	(AAT)n	Simple_repeat	1	40	(0)	1893333
15	4.7	0.0	0.0	chr19	50357072	50357093	(8260523)	+	(CAC)n	Simple_repeat	1	22	(0)	1893334
671	6.5	2.2	0.8	chr19	50906457	50906862	(7710754)	C	MSR1	Satellite	(15)	411	1	1894567
13	11.2	3.2	3.1	chr19	51719643	51719673	(6897943)	+	(GCC)n	Simple_repeat	1	32	(0)	1896112
6274	12.6	2.8	5.4	chr19	53745804	53746838	(4870778)	C	LTR13	LTR/ERVK	(0)	1007	1	1900118
253	18.6	2.8	6.7	chr19	53793051	53793125	(4824491)	C	MER20	DNA/hAT-Charlie	(63)	156	85	1900254
1336	18.0	0.0	7.1	chr19	53793213	53793507	(4824109)	C	AluJr	SINE/Alu	(38)	274	1	1900255
1874	12.7	2.0	2.3	chr19	54200327	54200626	(4416990)	+	AluJb	SINE/Alu	1	299	(13)	1901299
36	26.2	5.3	2.2	chr19	55383774	55383943	(3233673)	+	G-rich	Low_complexity	1	179	(0)	1903624
589	10.8	7.6	0.1	chr19	55448013	55449159	(3168457)	+	(AC)n	Simple_repeat	1	1234	(0)	1903759
15	24.2	6.1	0.0	chr19	55449386	55449434	(3168182)	+	(CA)n	Simple_repeat	1	52	(0)	1903760
198	31.6	8.7	0.0	chr19	55504085	55504179	(3113437)	C	MIRb	SINE/MIR	(95)	173	70	1903859
216	29.3	1.7	0.0	chr19	55504436	55504493	(3113123)	+	MIRc	SINE/MIR	83	141	(127)	1903860
16	9.3	0.0	0.0	chr19	55519038	55519060	(3098556)	+	(A)n	Simple_repeat	1	23	(0)	1903900
161	34.6	1.7	5.0	chr19	55526812	55527793	(3089823)	+	(CACACT)n	Simple_repeat	1	942	(0)	1903928
314	33.5	3.3	1.9	chr19	56080965	56081187	(2536429)	C	L2b	LINE/L2	(18)	3408	3182	1905068
2026	12.7	2.9	1.6	chr19	56104847	56105154	(2512462)	+	AluSx1	SINE/Alu	1	312	(0)	1905113
628	10.9	7.1	0.0	chr19	56105417	56105508	(2512108)	+	HY3	scRNA	2	100	(1)	1905114
628	31.5	7.7	2.0	chr19	56916097	56916601	(1701015)	C	L2a	LINE/L2	(1239)	2180	1645	1906722
1007	20.8	6.2	0.0	chr19	56943020	56943245	(1674371)	+	MER33	DNA/hAT-Charlie	7	247	(77)	1906791
240	23.5	1.4	6.3	chr19	57578179	57578292	(1039324)	+	MIR	SINE/MIR	29	130	(100)	1908002
229	30.5	3.3	4.1	chr19	57578298	57578420	(1039196)	+	L2	LINE/L2	2761	2882	(537)	1908003
1164	16.8	11.0	9.4	chr19	57770856	57771019	(846597)	C	AluJb	SINE/Alu	(16)	296	118	1908292
2551	5.4	0.0	0.0	chr19	57771020	57771316	(846300)	+	AluSc8	SINE/Alu	1	297	(14)	1908293
252	32.6	2.0	0.0	chr19	58451126	58451223	(166393)	C	MIR3	SINE/MIR	(79)	129	30	1909551
7941	3.4	12.7	0.7	chr19	58606191	58607452	(10164)	+	TAR1	Satellite/telo	314	1748	(363)	1909801
139	3.3	0.6	2.4	chr19	58607453	58607616	(10000)	+	(GGGTTA)n	Simple_repeat	1	165	(0)	1909802
164	8.9	0.3	4.8	chr2	10175	10462	(242183067)	+	(ACCCTA)n	Simple_repeat	1	289	(0)	1910810
158	21.6	0.4	6.7	chr2	10463	10514	(242183015)	+	(CCCAAC)n	Simple_repeat	388	511	(0)	1910809
40	7.7	0.0	5.2	chr2	10516	10592	(242182937)	+	(ACCCTA)n	Simple_repeat	1	77	(0)	1910811
6455	13.9	14.4	5.6	chr2	10601	12198	(242181331)	C	TAR1	Satellite/telo	(218)	1893	132	1910812
13	9.3	0.0	0.0	chr2	288132	288154	(241905375)	+	(CCCG)n	Simple_repeat	1	23	(0)	1911121
51	26.4	3.3	4.4	chr2	288843	289082	(241904447)	+	(CCCTCC)n	Simple_repeat	1	248	(0)	1911122
238	33.3	1.8	3.6	chr2	3303570	3303681	(238889848)	C	MLT1N2	LTR/ERVL-MaLR	(431)	131	22	1914294
26	4.8	0.0	7.8	chr2	3703578	3703628	(238489901)	+	(CCCGT)n	Simple_repeat	1	51	(0)	1914853
684	25.8	4.5	5.1	chr2	9160257	9160611	(233032918)	C	L1ME3G	LINE/L1	(542)	382	30	1922457
337	30.1	10.2	0.8	chr2	9160614	9160737	(233032792)	C	L1M5	LINE/L1	(1050)	5096	4960	1922454
437	29.8	6.3	10.2	chr2	9160753	9161042	(233032487)	+	LTR16A2	LTR/ERVL	147	431	(64)	1922458
2397	9.4	0.7	0.0	chr2	9161043	9161351	(233032178)	+	AluSx3	SINE/Alu	1	311	(0)	1922459
278	30.6	9.3	2.0	chr2	9799627	9799776	(232393753)	+	L2b	LINE/L2	3185	3346	(29)	1923672
19	22.6	1.6	3.2	chr2	9800023	9800083	(232393446)	+	(CTTCC)n	Simple_repeat	1	62	(0)	1923677
279	29.3	17.9	1.4	chr2	10141811	10142415	(232051114)	C	L2a	LINE/L2	(9)	3417	2669	1924251
2281	10.0	0.0	0.0	chr2	10142863	10143172	(232050357)	C	AluYf1	SINE/Alu	(1)	310	1	1924252
1224	20.9	4.0	4.6	chr2	10408892	10409217	(231784312)	C	MER33	DNA/hAT-Charlie	(0)	324	1	1924718
283	32.6	3.6	1.6	chr2	10817720	10817909	(231375620)	+	MLT1J2	LTR/ERVL-MaLR	255	448	(0)	1925535
53	0.0	0.0	0.0	chr2	11132998	11133042	(231060487)	+	(CA)n	Simple_repeat	1	45	(0)	1926079
1833	19.6	2.0	0.0	chr2	11428871	11429211	(230764318)	+	Tigger3a	DNA/TcMar-Tigger	1	348	(0)	1926626
2202	12.0	2.9	0.0	chr2	11429309	11429608	(230763921)	C	AluSx	SINE/Alu	(3)	309	1	1926627
800	30.3	7.4	2.5	chr2	11446759	11447277	(230746252)	C	L1M3b	LINE/L1	(5026)	1255	673	1926661
321	25.0	3.2	1.1	chr2	20351781	20351873	(221841656)	+	L2b	LINE/L2	3224	3318	(57)	1940193
1661	18.2	7.0	9.1	chr2	24543028	24543480	(217650049)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	15	1946341
936	32.7	9.9	4.9	chr2	24543512	24544419	(217649110)	C	L2c	LINE/L2	(92)	3295	2247	1946342
13	8.8	0.0	3.9	chr2	26088127	26088152	(216105377)	+	(TGGT)n	Simple_repeat	1	26	(0)	1949317
16	26.6	2.6	3.8	chr2	26184379	26184464	(216009065)	+	(GGCGGC)n	Simple_repeat	1	84	(0)	1949501
12	18.9	7.1	0.0	chr2	26184741	26184782	(216008747)	+	(CGCTGG)n	Simple_repeat	1	45	(0)	1949502
297	33.1	7.8	1.2	chr2	28155683	28155850	(214037679)	C	Tigger16a	DNA/TcMar-Tigger	(664)	293	114	1953084
16	17.3	2.6	0.0	chr2	28567187	28567225	(213626304)	+	A-rich	Low_complexity	1	40	(0)	1953788
187	30.2	0.0	1.6	chr2	30714091	30714154	(211479375)	C	MIRb	SINE/MIR	(164)	104	42	1957455
47	0.0	0.0	0.0	chr2	30714314	30714356	(211479173)	+	(T)n	Simple_repeat	1	43	(0)	1957456
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
2487	7.6	0.0	0.0	chr2	37535888	37536188	(204657341)	+	AluYk2	SINE/Alu	1	301	(10)	1967881
400	32.2	8.7	0.9	chr2	38479961	38480173	(203713356)	C	MLT1L	LTR/ERVL-MaLR	(110)	500	270	1969310
851	27.0	7.1	4.0	chr2	38480615	38480915	(203712614)	C	LTR67B	LTR/ERVL	(309)	311	1	1969315
232	32.4	7.2	3.4	chr2	42828721	42828949	(199364580)	+	MIRb	SINE/MIR	13	254	(14)	1976394
408	22.1	0.0	0.0	chr2	43022380	43022456	(199171073)	+	Tigger16a	DNA/TcMar-Tigger	105	181	(776)	1976731
293	7.9	0.0	0.0	chr2	44166350	44166387	(198027142)	+	THE1D-int	LTR/ERVL-MaLR	1466	1503	(128)	1978728
12	11.1	0.0	8.6	chr2	45008417	45008451	(197185078)	+	(GGCTG)n	Simple_repeat	1	35	(0)	1980085
814	21.2	16.4	11.8	chr2	47388170	47388541	(194804988)	C	LTR41	LTR/ERVL	(329)	439	34	1983969
1853	9.7	0.0	3.1	chr2	47388542	47388798	(194804731)	C	AluSq2	SINE/Alu	(12)	301	53	1983970
11247	10.7	1.5	0.9	chr2	54324648	54326267	(187867262)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	1994174
10140	11.8	4.3	0.4	chr2	58942145	58943662	(183249867)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	2000474
2390	7.5	1.6	0.7	chr2	61888897	61889202	(180304327)	C	AluSx1	SINE/Alu	(3)	309	1	2005406
15	0.0	3.9	3.7	chr2	63841994	63842019	(178351510)	+	(TTTC)n	Simple_repeat	1	27	(0)	2008431
411	28.9	12.7	6.3	chr2	64905260	64905584	(177287945)	C	MamGypLTR3a	LTR/Gypsy	(27)	867	529	2010156
588	28.9	11.5	2.8	chr2	64917502	64917715	(177275814)	+	MIRb	SINE/MIR	28	268	(0)	2010187
12	20.8	3.6	5.3	chr2	64918187	64918241	(177275288)	+	G-rich	Low_complexity	1	57	(0)	2010188
1926	14.4	0.7	0.3	chr2	64918275	64918558	(177274971)	C	AluJb	SINE/Alu	(26)	286	2	2010189
221	27.5	9.4	12.2	chr2	70199189	70199384	(171994145)	C	L2c	LINE/L2	(83)	3304	3111	2018632
480	14.8	3.9	9.0	chr2	70199460	70199586	(171993943)	+	LTR41C	LTR/ERVL	80	201	(567)	2018634
400	15.2	0.0	16.1	chr2	70199729	70199846	(171993683)	C	MER53	DNA/hAT	(0)	193	95	2018635
14	14.1	0.0	3.0	chr2	70302019	70302051	(171891478)	+	(CCGCG)n	Simple_repeat	1	33	(0)	2018832
1061	20.5	12.6	7.7	chr2	70302275	70302362	(171891167)	C	L1ME2	LINE/L1	(0)	6179	6067	2018833
2248	10.7	0.0	0.3	chr2	70302363	70302660	(171890869)	+	AluSx	SINE/Alu	2	298	(14)	2018834
660	21.4	17.0	2.1	chr2	70340870	70341325	(171852204)	C	MLT1F	LTR/ERVL-MaLR	(5)	543	1	2018933
209	19.1	22.7	0.0	chr2	70946573	70946640	(171246889)	+	MIRb	SINE/MIR	121	208	(60)	2019877
14	24.7	0.0	2.2	chr2	70946948	70946992	(171246537)	+	(CCTCTC)n	Simple_repeat	1	45	(0)	2019878
6051	7.0	1.3	0.0	chr2	73877830	73878609	(168314920)	C	L1PA8	LINE/L1	(0)	6172	5383	2024358
14	23.9	0.0	6.6	chr2	74516017	74516077	(167677452)	+	(GCCGCT)n	Simple_repeat	1	61	(0)	2025517
1349	14.0	6.2	0.0	chr2	78427280	78427508	(163766021)	C	MER4A	LTR/ERV1	(0)	664	421	2030911
2941	19.7	3.6	0.9	chr2	78427511	78428910	(163764619)	+	L1MA3	LINE/L1	4847	6311	(1)	2030910
339	24.8	5.7	6.9	chr2	85266874	85267033	(156926496)	+	MIR3	SINE/MIR	33	190	(18)	2040417
2329	8.5	3.3	0.0	chr2	85267059	85267353	(156926176)	+	AluSz	SINE/Alu	1	305	(7)	2040418
11697	5.2	5.8	3.4	chr2	85333377	85334915	(156858614)	C	LTR12C	LTR/ERV1	(0)	1579	3	2040548
2193	8.8	2.7	0.7	chr2	85637703	85637996	(156555533)	C	AluSx1	SINE/Alu	(12)	300	1	2041188
2193	12.6	0.0	0.0	chr2	85638028	85638321	(156555208)	C	AluSq2	SINE/Alu	(19)	294	1	2041189
456	32.5	3.8	0.4	chr2	85679047	85679278	(156514251)	C	MLT1I	LTR/ERVL-MaLR	(42)	369	130	2041276
221	31.9	8.2	0.7	chr2	85827666	85827801	(156365728)	C	MIR3	SINE/MIR	(55)	153	7	2041586
1372	19.6	11.5	3.3	chr2	87348691	87349455	(154844074)	+	TAR1	Satellite/telo	1032	1867	(244)	2044122
5365	16.5	8.1	1.9	chr2	88018702	88019759	(154173770)	C	LTR28C	LTR/ERV1	(0)	1129	1	2045135
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
1617	16.8	16.7	0.8	chr2	91571048	91571654	(150621875)	C	TAR1	Satellite/telo	(244)	1867	1145	2048497
1698	20.7	0.0	0.7	chr2	95119328	95119627	(147073902)	+	AluJo	SINE/Alu	1	298	(14)	2050212
3764	14.8	7.2	9.4	chr2	95119628	95119792	(147073737)	+	L1MB7	LINE/L1	5461	5597	(587)	2050211
1706	13.3	0.8	0.8	chr2	95119793	95120047	(147073482)	+	AluJo	SINE/Alu	13	267	(45)	2050213
327	26.2	12.0	0.0	chr2	95404686	95404788	(146788741)	C	L2b	LINE/L2	(0)	3375	3259	2050648
205	23.8	1.6	7.3	chr2	95405067	95405134	(146788395)	+	L2c	LINE/L2	3085	3148	(239)	2050641
279	18.2	0.0	0.0	chr2	95992823	95992866	(146200663)	+	MIR3	SINE/MIR	142	185	(23)	2051417
412	30.2	7.5	3.9	chr2	96507771	96507984	(145685545)	C	MIR	SINE/MIR	(42)	220	3	2052258
232	25.0	0.0	0.0	chr2	97590839	97590882	(144602647)	+	MIR3	SINE/MIR	142	185	(23)	2053839
582	25.2	2.7	1.8	chr2	97710134	97710298	(144483231)	C	MIRb	SINE/MIR	(11)	219	57	2054033
6434	16.0	1.8	2.2	chr2	97885488	97886818	(144306711)	C	L1M2c	LINE/L1	(4306)	3260	1944	2054238
711	15.8	0.0	0.0	chr2	97886819	97886945	(144306584)	+	ALR/Alpha	Satellite/centr	1	127	(45)	2054240
228	26.2	1.8	12.8	chr2	98385402	98385589	(143807940)	C	L1ME4a	LINE/L1	(28)	6096	5930	2054937
311	25.6	10.4	3.7	chr2	98649379	98649512	(143544017)	+	L1M4c	LINE/L1	613	756	(5547)	2055271
2725	24.8	9.5	8.4	chr2	98649737	98650668	(143542861)	+	L1M4c	LINE/L1	777	1704	(4609)	2055271
1895	19.4	5.2	0.0	chr2	101038808	101039244	(141154285)	+	L1MB3	LINE/L1	5723	6183	(0)	2058877
285	33.3	4.9	3.9	chr2	101342130	101342332	(140851197)	+	MIRb	SINE/MIR	27	231	(37)	2059433
242	30.4	11.9	3.9	chr2	101342623	101342776	(140850753)	C	L2c	LINE/L2	(0)	3387	3220	2059434
33	7.2	0.0	0.0	chr2	104856078	104856121	(137337408)	+	(GCC)n	Simple_repeat	1	44	(0)	2064072
18	10.7	0.0	0.0	chr2	104856230	104856259	(137337270)	+	(CGG)n	Simple_repeat	1	30	(0)	2064073
19	0.0	0.0	0.0	chr2	104856318	104856341	(137337188)	+	(CAC)n	Simple_repeat	1	24	(0)	2064074
17	0.0	7.7	0.0	chr2	104856392	104856417	(137337112)	+	(CGG)n	Simple_repeat	1	28	(0)	2064075
12	10.7	6.7	0.0	chr2	107829535	107829564	(134363965)	+	(CGGCCT)n	Simple_repeat	1	32	(0)	2068407
635	25.3	11.8	9.1	chr2	109031129	109031480	(133162049)	C	MLT1A1	LTR/ERVL-MaLR	(3)	405	43	2070165
1952	12.2	2.8	0.4	chr2	112345174	112345452	(129848077)	C	AluJb	SINE/Alu	(21)	291	6	2074929
535	29.8	7.4	3.3	chr2	112345601	112345961	(129847568)	+	L1MEc	LINE/L1	36	412	(5988)	2074930
968	20.4	1.5	6.0	chr2	112433719	112434000	(129759529)	+	L1M4	LINE/L1	4215	4483	(1663)	2075094
513	28.6	18.8	2.7	chr2	112748981	112749719	(129443810)	+	L1MEi	LINE/L1	2077	3013	(3201)	2075673
862	17.7	21.0	0.0	chr2	112749725	112749961	(129443568)	+	LTR50	LTR/ERVL	1	300	(495)	2075674
321	26.9	11.9	3.1	chr2	112750073	112750233	(129443296)	+	LTR50	LTR/ERVL	481	657	(138)	2075674
576	28.3	11.3	3.7	chr2	112750340	112750649	(129442880)	+	LTR16C	LTR/ERVL	156	489	(0)	2075675
294	23.0	0.0	0.9	chr2	113390033	113390119	(128803410)	C	L1M5	LINE/L1	(347)	5776	5693	2076723
555	29.6	1.7	2.8	chr2	113390589	113390765	(128802764)	C	MIR3	SINE/MIR	(23)	185	11	2076724
3111	12.1	0.9	1.4	chr2	113601977	113602680	(128590849)	+	TAR1	Satellite/telo	1	700	(1434)	2077035
5958	3.6	0.4	0.6	chr2	113603478	113604530	(128588999)	C	TAR1	Satellite/telo	(316)	1050	1	2077038
660	17.3	6.7	0.7	chr2	113903226	113903365	(128290164)	C	L1MEf	LINE/L1	(4902)	1298	1150	2077600
1144	15.4	0.6	0.0	chr2	113903366	113903534	(128289995)	C	AluSz6	SINE/Alu	(11)	301	132	2077601
1681	11.3	14.4	0.0	chr2	113903538	113903793	(128289736)	C	AluSz	SINE/Alu	(13)	299	1	2077602
22347	10.3	3.1	1.4	chr2	119045046	119051168	(123142361)	C	L1PB1	LINE/L1	(372)	6495	253	2084614
1391	14.0	0.8	3.7	chr2	119408001	119408244	(122785285)	+	Tigger4	DNA/TcMar-Tigger	2495	2731	(0)	2085280
484	24.4	14.4	2.5	chr2	119476397	119476640	(122716889)	+	MamGypLTR3	LTR/Gypsy	597	874	(20)	2085420
217	28.9	1.3	2.6	chr2	119765776	119765853	(122427676)	C	L2c	LINE/L2	(319)	3068	2992	2085925
27	25.5	0.0	0.0	chr2	119765865	119765934	(122427595)	+	(TGTG)n	Simple_repeat	1	70	(0)	2085926
333	29.8	8.3	8.8	chr2	119766031	119766247	(122427282)	+	Charlie17a	DNA/hAT-Charlie	2	217	(0)	2085927
228	24.7	4.9	11.0	chr2	119766248	119766348	(122427181)	C	MamTip1	DNA/hAT-Tip100	(17)	250	156	2085928
66	1.7	0.0	0.0	chr2	119766450	119766510	(122427019)	+	(GT)n	Simple_repeat	1	61	(0)	2085929
387	21.3	1.3	0.0	chr2	119766511	119766585	(122426944)	C	MamTip1	DNA/hAT-Tip100	(190)	77	2	2085928
193	29.6	8.3	9.7	chr2	119766603	119766797	(122426732)	C	L2c	LINE/L2	(568)	2851	2660	2085925
721	31.8	0.0	3.7	chr2	119823696	119823940	(122369589)	+	MLT1G	LTR/ERVL-MaLR	20	255	(336)	2086018
1407	23.4	2.3	3.8	chr2	119823960	119824358	(122369171)	C	L1MD	LINE/L1	(3152)	2994	2602	2086019
9661	6.3	11.8	1.2	chr2	119996801	119998208	(122195321)	+	LTR12C	LTR/ERV1	2	1579	(0)	2086276
635	29.6	3.6	0.5	chr2	120669397	120669586	(121523943)	C	MamRep564	Unknown	(132)	225	30	2087379
12	15.3	3.5	0.0	chr2	120735780	120735808	(121457721)	+	(GGCG)n	Simple_repeat	1	30	(0)	2087492
13	13.1	0.0	0.0	chr2	120735967	120735991	(121457538)	+	(GGC)n	Simple_repeat	1	25	(0)	2087493
583	22.2	1.8	4.7	chr2	126227066	126227235	(115966294)	C	MER3	DNA/hAT-Charlie	(7)	202	38	2095630
1012	18.0	6.1	1.6	chr2	127695252	127695500	(114498029)	C	MER92-int	LTR/ERV1	(4354)	864	604	2097829
376	29.1	9.8	1.7	chr2	128469004	128469181	(113724348)	+	MIRb	SINE/MIR	17	210	(58)	2099251
517	32.3	4.3	0.0	chr2	128469308	128469505	(113724024)	C	MamGypLTR3a	LTR/Gypsy	(182)	799	593	2099252
240	24.4	9.4	3.4	chr2	128469574	128469692	(113723837)	C	MamGypLTR3a	LTR/Gypsy	(770)	211	85	2099252
16	4.5	0.0	0.0	chr2	131034875	131034897	(111158632)	+	(CCG)n	Simple_repeat	1	23	(0)	2102718
248	26.8	4.3	3.5	chr2	131802146	131802261	(110391268)	+	MIRb	SINE/MIR	115	231	(37)	2103744
13	16.8	0.0	5.4	chr2	131829515	131829551	(110363978)	+	G-rich	Low_complexity	1	37	(0)	2103777
2930	1.0	0.0	0.0	chr2	136309678	136309988	(105883541)	+	AluYa5	SINE/Alu	1	311	(0)	2110486
16	7.2	0.0	6.1	chr2	136309989	136310009	(105883520)	+	(AAATG)n	Simple_repeat	1	21	(0)	2110487
2243	8.2	0.0	5.0	chr2	136423039	136423355	(105770174)	+	AluSq2	SINE/Alu	1	301	(12)	2110679
21	8.8	0.0	5.0	chr2	136423940	136423979	(105769550)	+	(TGT)n	Simple_repeat	1	40	(0)	2110680
227	28.9	6.2	2.2	chr2	142286979	142287070	(99906459)	C	MIR	SINE/MIR	(132)	130	35	2118583
419	29.8	6.4	0.0	chr2	145591946	145592076	(96601453)	+	MER5A	DNA/hAT-Charlie	44	183	(6)	2122858
954	28.3	5.3	1.6	chr2	145592092	145592414	(96601115)	+	MER58B	DNA/hAT-Charlie	5	340	(1)	2122859
4104	12.7	4.3	6.7	chr2	146412731	146413533	(95779996)	C	LTR1	LTR/ERV1	(0)	783	1	2123885
8057	18.1	0.8	2.2	chr2	157750931	157752572	(84440957)	+	L1PB1	LINE/L1	311	2022	(4913)	2139147
23	32.0	0.0	2.2	chr2	157876292	157876383	(84317146)	+	GA-rich	Low_complexity	1	92	(0)	2139335
12	11.6	3.3	3.2	chr2	160062033	160062062	(82131467)	+	(GCCC)n	Simple_repeat	1	31	(0)	2142576
21	15.3	0.0	0.0	chr2	160062365	160062402	(82131127)	+	(CAG)n	Simple_repeat	1	38	(0)	2142577
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
619	18.6	0.5	0.0	chr2	161281902	161282139	(80911390)	+	ACRO1	Satellite/acro	1	239	(5)	2144211
10146	6.6	9.1	0.4	chr2	163913430	163914868	(78278661)	+	LTR12C	LTR/ERV1	3	1579	(0)	2147601
10351	19.8	7.3	3.5	chr2	167330609	167332272	(74861257)	C	L1MA4A	LINE/L1	(4898)	1951	190	2152065
16	18.9	2.3	2.2	chr2	168521487	168521530	(73671999)	+	GA-rich	Low_complexity	1	45	(0)	2153675
19252	9.8	1.5	4.3	chr2	171940070	171941211	(70252318)	C	Charlie3	DNA/hAT-Charlie	(1183)	1523	407	2159307
1186	12.7	0.0	0.0	chr2	171941212	171941376	(70252153)	C	AluSx	SINE/Alu	(11)	301	137	2159310
19252	9.8	1.5	4.3	chr2	171941377	171941823	(70251706)	C	Charlie3	DNA/hAT-Charlie	(2300)	406	2	2159307
402	28.1	6.9	0.8	chr2	172478287	172478408	(69715121)	C	Tigger16b	DNA/TcMar-Tigger	(8)	328	199	2160224
4363	13.7	3.6	2.7	chr2	172513565	172514275	(69679254)	+	HERVK22-int	LTR/ERVK	24	741	(6096)	2160277
774	17.6	5.5	0.0	chr2	172514701	172514836	(69678693)	+	HERVK22-int	LTR/ERVK	2327	2470	(4367)	2160277
275	31.4	10.1	6.8	chr2	173457280	173457720	(68735809)	+	L2b	LINE/L2	2919	3375	(0)	2161718
17	19.1	0.0	4.3	chr2	173457736	173457781	(68735748)	+	GA-rich	Low_complexity	1	46	(0)	2161719
7463	12.6	9.4	0.8	chr2	175256250	175257558	(66935971)	C	LTR12C	LTR/ERV1	(145)	1434	3	2164550
229	23.6	9.4	5.4	chr2	175257653	175257764	(66935765)	+	L1ME4a	LINE/L1	5965	6081	(43)	2164551
12	13.9	0.0	8.1	chr2	176130327	176130363	(66063166)	+	(CGC)n	Simple_repeat	1	37	(0)	2165685
22	3.5	0.0	0.0	chr2	176130408	176130436	(66063093)	+	(GGC)n	Simple_repeat	1	29	(0)	2165686
23	16.7	0.0	0.0	chr2	176130549	176130595	(66062934)	+	(CCCGCA)n	Simple_repeat	1	47	(0)	2165687
19	20.9	0.0	0.0	chr2	176130686	176130734	(66062795)	+	(CCT)n	Simple_repeat	1	49	(0)	2165688
15	33.1	1.2	2.4	chr2	176160763	176160844	(66032685)	+	G-rich	Low_complexity	1	83	(0)	2165715
263	29.9	5.2	0.0	chr2	177254759	177254866	(64938663)	+	MIR	SINE/MIR	2	123	(145)	2167349
16	20.7	4.1	7.9	chr2	179861032	179861128	(62332401)	+	G-rich	Low_complexity	1	101	(0)	2170734
23	9.8	0.0	6.1	chr2	179861243	179861291	(62332238)	+	(GGCGGT)n	Simple_repeat	1	49	(0)	2170735
19	18.0	4.4	4.2	chr2	179861414	179861481	(62332048)	+	(GCCCG)n	Simple_repeat	1	71	(0)	2170736
7178	11.2	8.4	8.4	chr2	181144772	181146024	(61047505)	C	LTR12D	LTR/ERV1	(0)	1254	1	2172364
1165	16.6	5.3	14.5	chr2	183026162	183026498	(59167031)	+	AluJr	SINE/Alu	3	306	(6)	2174801
613	28.9	4.3	2.4	chr2	183026607	183026854	(59166675)	+	MIR	SINE/MIR	2	254	(8)	2174802
6775	8.9	4.5	0.6	chr2	183294918	183295885	(58897644)	+	LTR13	LTR/ERVK	1	1007	(0)	2175250
17254	18.0	2.9	0.5	chr2	185336085	185339138	(56854391)	C	L1MA3	LINE/L1	(4427)	3138	9	2177656
15	14.9	2.4	4.8	chr2	187003415	187003455	(55190074)	+	(CTG)n	Simple_repeat	1	42	(0)	2179844
15	0.0	0.0	0.0	chr2	187003474	187003490	(55190039)	+	(TC)n	Simple_repeat	1	17	(0)	2179845
14	21.8	0.0	0.0	chr2	187003491	187003506	(55190023)	+	(TTTTCT)n	Simple_repeat	2	34	(0)	2179846
1915	14.1	1.3	1.3	chr2	190383166	190383464	(51810065)	C	AluSx3	SINE/Alu	(11)	300	2	2184277
2381	9.1	0.3	1.3	chr2	190383466	190383774	(51809755)	C	AluSc8	SINE/Alu	(5)	306	1	2184278
399	32.2	4.5	0.0	chr2	191677452	191677600	(50515929)	+	MIR3	SINE/MIR	39	194	(14)	2186262
29	3.2	0.0	0.0	chr2	191678404	191678435	(50515094)	+	(T)n	Simple_repeat	1	32	(0)	2186263
11258	7.6	6.9	0.5	chr2	195515498	195516972	(46676557)	+	LTR12C	LTR/ERV1	3	1579	(0)	2191017
13	17.6	0.0	9.3	chr2	199463083	199463136	(42730393)	+	G-rich	Low_complexity	1	54	(0)	2196852
12	22.4	0.0	2.6	chr2	199463510	199463547	(42729982)	+	G-rich	Low_complexity	1	38	(0)	2196853
1285	18.1	5.3	3.8	chr2	199486194	199486317	(42707212)	C	MER33	DNA/hAT-Charlie	(4)	320	187	2196882
435	25.8	13.0	5.3	chr2	199985802	199986181	(42207348)	+	LTR50	LTR/ERVL	137	780	(15)	2197649
3241	14.5	1.8	1.4	chr2	200199608	200200382	(41993147)	+	L1PBa	LINE/L1	620	1541	(5321)	2197969
192	33.6	6.0	0.8	chr2	200509596	200509721	(41683808)	+	MER5A	DNA/hAT-Charlie	1	133	(56)	2198445
12	21.8	5.3	3.3	chr2	200509853	200509909	(41683620)	+	(GCCCGA)n	Simple_repeat	1	60	(0)	2198446
11	27.6	1.0	9.1	chr2	200509910	200509948	(41683581)	+	(CGGCCCG)n	Simple_repeat	3	99	(0)	2198447
20	11.8	0.0	2.6	chr2	200510168	200510206	(41683323)	+	(GCCAC)n	Simple_repeat	1	39	(0)	2198448
265	28.4	11.0	2.6	chr2	200510338	200510468	(41683061)	C	MIRc	SINE/MIR	(121)	147	6	2198449
233	27.6	9.9	0.2	chr2	201861126	201861230	(40332299)	+	MIRc	SINE/MIR	61	180	(88)	2200722
3779	21.2	12.2	0.7	chr2	203646250	203647247	(38546282)	C	LTR28C	LTR/ERV1	(0)	1129	1	2204393
12	19.3	4.7	2.2	chr2	205686012	205686054	(36507475)	+	(CCCCT)n	Simple_repeat	1	45	(0)	2207286
15	10.9	4.4	6.4	chr2	206085808	206085852	(36107677)	+	(GCCC)n	Simple_repeat	1	47	(0)	2207944
53	0.0	0.0	0.0	chr2	207310067	207310111	(34883418)	+	(CA)n	Simple_repeat	1	45	(0)	2209824
348	19.8	5.0	1.8	chr2	209477222	209477337	(32716192)	+	L1MD3	LINE/L1	7897	8041	(1)	2213087
4829	21.2	5.5	2.0	chr2	210336494	210337267	(31856262)	C	L1PA17	LINE/L1	(4533)	2336	1572	2214273
38	0.0	0.0	0.0	chr2	210337268	210337300	(31856229)	+	(TA)n	Simple_repeat	1	33	(0)	2214276
4826	21.8	6.1	6.1	chr2	210337301	210337381	(31856148)	C	L1PA17	LINE/L1	(5298)	1571	1495	2214273
504	32.9	0.9	6.3	chr2	210337531	210337751	(31855778)	C	L1PA17	LINE/L1	(6086)	1063	855	2214273
4953	17.1	1.9	1.6	chr2	212863045	212863994	(29329535)	C	L1M3f	LINE/L1	(4370)	958	6	2217519
23619	9.6	1.2	1.1	chr2	216746027	216752025	(25441504)	+	L1PB1	LINE/L1	846	6866	(1)	2223361
21	19.8	2.0	0.0	chr2	217106541	217106589	(25086940)	+	(TCCCT)n	Simple_repeat	1	50	(0)	2223927
259	35.1	4.6	3.0	chr2	217106624	217106858	(25086671)	+	L2c	LINE/L2	2924	3162	(225)	2223928
15	33.6	1.4	6.3	chr2	217789636	217789775	(24403754)	+	G-rich	Low_complexity	1	142	(0)	2224960
471	31.2	7.0	11.4	chr2	219277556	219278123	(22915406)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	22	2227636
285	25.6	7.9	6.4	chr2	219542262	219542386	(22651143)	+	MIRb	SINE/MIR	94	220	(48)	2228101
1623	15.4	5.5	0.4	chr2	227747951	227748166	(14445363)	+	AluJb	SINE/Alu	58	273	(39)	2241030
217	22.0	7.8	0.0	chr2	227748202	227748260	(14445269)	C	MIR	SINE/MIR	(120)	142	79	2241032
1448	20.3	6.8	0.3	chr2	227748607	227748896	(14444633)	C	AluJr	SINE/Alu	(2)	310	1	2241033
348	28.3	7.5	9.4	chr2	230008137	230008333	(12185196)	+	MIR3	SINE/MIR	3	196	(12)	2244553
13	21.1	0.0	8.6	chr2	230068523	230068580	(12124949)	+	(GGCCCGC)n	Simple_repeat	1	58	(0)	2244681
574	31.9	17.4	5.4	chr2	230902114	230902908	(11290621)	C	MamGypLTR3a	LTR/Gypsy	(0)	981	72	2245886
198	30.0	0.0	1.6	chr2	231410087	231410147	(10783382)	C	MIR	SINE/MIR	(1)	261	202	2246803
709	27.6	16.6	3.0	chr2	231410149	231410511	(10783018)	C	MamGypLTR3a	LTR/Gypsy	(0)	981	560	2246804
1185	21.7	3.5	1.8	chr2	231410660	231410941	(10782588)	C	MamGypLTR3a	LTR/Gypsy	(648)	333	47	2246804
398	21.5	16.3	0.0	chr2	231483040	231483188	(10710341)	+	MER45A	DNA/hAT-Tip100	1	178	(0)	2246964
17	26.3	1.4	4.0	chr2	231483553	231483625	(10709904)	+	G-rich	Low_complexity	1	74	(0)	2246965
18	14.6	5.3	0.0	chr2	231614818	231614855	(10578674)	+	(CG)n	Simple_repeat	1	40	(0)	2247266
17	26.7	0.0	1.8	chr2	232386572	232386627	(9806902)	+	(CCCTC)n	Simple_repeat	1	56	(0)	2248577
18	25.9	1.5	2.9	chr2	232876131	232876198	(9317331)	+	G-rich	Low_complexity	1	69	(0)	2249491
18	30.4	4.3	1.0	chr2	232876199	232876212	(9317317)	+	(GGCGG)n	Simple_repeat	41	98	(0)	2249490
12	26.4	3.6	1.7	chr2	232876750	232876805	(9316724)	+	(CGGCCA)n	Simple_repeat	1	58	(0)	2249492
2233	16.5	5.9	1.0	chr2	234577248	234577652	(7615877)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2252209
282	34.3	3.9	9.1	chr2	234577653	234577850	(7615679)	C	MamGypLTR3a	LTR/Gypsy	(172)	809	619	2252208
335	17.6	10.8	1.3	chr2	234881790	234881864	(7311665)	+	MLT1M	LTR/ERVL-MaLR	96	178	(494)	2252707
2628	18.4	2.6	3.0	chr2	234881913	234882443	(7311086)	C	MER45B	DNA/hAT-Tip100	(17)	1023	495	2252708
27	21.2	0.0	0.0	chr2	235218211	235218262	(6975267)	+	(TG)n	Simple_repeat	1	52	(0)	2253217
23	21.1	3.5	0.0	chr2	235218263	235218278	(6975251)	+	(TGCG)n	Simple_repeat	1	70	(0)	2253218
521	21.3	5.7	0.0	chr2	236214127	236214276	(5979253)	+	MER5A1	DNA/hAT-Charlie	1	159	(7)	2254680
17	0.0	0.0	0.0	chr2	236215021	236215039	(5978490)	+	(A)n	Simple_repeat	1	19	(0)	2254681
94	22.4	1.5	6.1	chr2	236237335	236237671	(5955858)	+	G-rich	Low_complexity	1	342	(0)	2254717
342	29.3	5.1	8.0	chr2	237486735	237486897	(4706632)	+	MIRb	SINE/MIR	20	177	(91)	2256426
18	16.4	7.1	5.6	chr2	237487290	237487373	(4706156)	+	(CGCCCTG)n	Simple_repeat	1	90	(0)	2256427
701	28.4	4.1	5.2	chr2	237930840	237931110	(4262419)	C	MLT1F2	LTR/ERVL-MaLR	(249)	311	44	2257073
287	19.1	4.5	0.0	chr2	237931337	237931399	(4262130)	C	MER91B	DNA/hAT-Tip100	(122)	68	3	2257075
7782	5.9	22.1	0.7	chr2	238057187	238058423	(4135106)	C	LTR12C	LTR/ERV1	(0)	1579	2	2257305
780	29.9	10.0	4.1	chr2	239687412	239688055	(2505474)	C	L1MC4	LINE/L1	(337)	7705	6944	2259204
776	30.0	6.1	2.1	chr2	239688453	239688827	(2504702)	+	L1ME4c	LINE/L1	289	679	(151)	2259209
1216	19.9	0.8	2.4	chr2	240160082	240160328	(2033201)	+	LTR31	LTR/ERV1	1	243	(376)	2259761
250	29.5	5.4	0.0	chr2	240160861	240160965	(2032564)	+	L2b	LINE/L2	3228	3338	(37)	2259762
1592	16.5	8.2	3.8	chr2	240194082	240194402	(1999127)	C	L1MB3	LINE/L1	(50)	6133	5793	2259799
494	13.5	4.3	0.0	chr2	240194403	240194491	(1999038)	+	MSTB2	LTR/ERVL-MaLR	1	93	(364)	2259801
227	18.0	0.0	0.0	chr2	240194490	240194539	(1998990)	+	MSTB2	LTR/ERVL-MaLR	44	93	(364)	2259801
1631	20.6	3.0	5.2	chr2	240194586	240194990	(1998539)	+	MSTB1	LTR/ERVL-MaLR	37	432	(0)	2259802
7876	7.2	1.7	0.9	chr2	240494822	240495820	(1697709)	+	LTR13	LTR/ERVK	1	1007	(0)	2260093
8324	4.1	2.1	0.2	chr2	241732072	241733059	(460470)	C	LTR13	LTR/ERVK	(0)	1007	1	2261638
250	21.4	9.2	2.4	chr20	296917	297078	(64147089)	+	L1ME2z	LINE/L1	6243	6444	(0)	2262586
14	8.5	4.7	6.7	chr20	297647	297689	(64146478)	+	(CCCGGCGG)n	Simple_repeat	1	45	(0)	2262587
15	24.7	1.4	5.7	chr20	1002780	1002848	(63441319)	+	(GTCTCT)n	Simple_repeat	1	70	(0)	2264217
237	25.9	9.0	3.6	chr20	1312929	1313012	(63131155)	C	MIRb	SINE/MIR	(166)	102	14	2264787
12	10.7	2.9	5.7	chr20	1313562	1313595	(63130572)	+	G-rich	Low_complexity	1	35	(0)	2264789
2339	6.5	4.0	0.0	chr20	1900092	1900383	(62543784)	C	AluSp	SINE/Alu	(4)	309	6	2265858
325	27.4	18.8	1.7	chr20	2149319	2149494	(62294673)	+	MIRb	SINE/MIR	38	256	(12)	2266355
550	24.8	1.4	3.3	chr20	2149913	2150062	(62294105)	C	L1MB7	LINE/L1	(43)	6141	5995	2266356
227	23.6	9.1	12.7	chr20	2387052	2387177	(62056990)	+	MIR3	SINE/MIR	84	204	(4)	2266866
286	17.0	1.9	0.0	chr20	2387369	2387421	(62056746)	C	MamGypLTR3	LTR/Gypsy	(243)	651	598	2266867
253	30.4	7.4	6.7	chr20	2387490	2387623	(62056544)	C	MamGypLTR3	LTR/Gypsy	(400)	581	447	2266867
2438	20.5	7.4	0.7	chr20	2387688	2388227	(62055940)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	1	2266868
72	32.7	0.4	0.8	chr20	2800073	2800312	(61643855)	+	(GT)n	Simple_repeat	1	241	(0)	2267614
16	19.2	0.0	0.0	chr20	2821823	2821852	(61622315)	+	(T)n	Simple_repeat	1	30	(0)	2267651
20	17.2	5.6	4.0	chr20	2840134	2840204	(61603963)	+	(CCGCG)n	Simple_repeat	1	75	(0)	2267676
12	13.1	2.7	5.3	chr20	3752171	3752207	(60691960)	+	(GCGCCG)n	Simple_repeat	1	38	(0)	2269430
602	29.2	8.2	3.0	chr20	3787034	3787404	(60656763)	C	L1ME4a	LINE/L1	(0)	6124	5733	2269489
16	8.1	10.3	0.0	chr20	4221630	4221668	(60222499)	+	(CTGCGCG)n	Simple_repeat	1	43	(0)	2270389
23598	10.2	3.1	0.3	chr20	4757742	4760320	(59683847)	C	L1PB1	LINE/L1	(3931)	2932	252	2271270
13	26.9	2.0	1.9	chr20	5126688	5126738	(59317429)	+	(CGCTC)n	Simple_repeat	1	52	(0)	2272075
2285	9.9	0.0	1.0	chr20	5697214	5697516	(58746651)	+	AluSq2	SINE/Alu	1	300	(13)	2273073
15	0.0	0.0	0.0	chr20	6124234	6124250	(58319917)	+	(GC)n	Simple_repeat	1	17	(0)	2273911
44	2.4	0.0	0.0	chr20	6124251	6124292	(58319875)	+	(CA)n	Simple_repeat	1	42	(0)	2273912
1854	10.2	8.4	1.1	chr20	6124297	6124561	(58319606)	C	AluSc	SINE/Alu	(23)	286	1	2273913
4005	18.1	3.8	0.6	chr20	7093643	7094543	(57349624)	C	L1PB4	LINE/L1	(91)	6065	5128	2275404
2765	29.9	2.6	3.5	chr20	7094544	7095406	(57348761)	+	ERVL-E-int	LTR/ERVL	4157	5011	(656)	2275402
1025	24.8	17.6	1.9	chr20	17854181	17854543	(46589624)	C	LTR33A_	LTR/ERVL	(77)	443	16	2291614
17	16.5	3.9	3.8	chr20	23035569	23035619	(41408548)	+	(CGG)n	Simple_repeat	1	53	(0)	2299159
497	22.1	10.3	0.0	chr20	23235581	23235711	(41208456)	+	MamGypLTR3	LTR/Gypsy	593	738	(156)	2299412
292	18.5	0.0	3.6	chr20	23426022	23426102	(41018065)	C	AluJb	SINE/Alu	(0)	302	245	2299698
29515	0.3	0.0	0.0	chr20	23426109	23432140	(41012027)	+	L1HS	LINE/L1	125	6155	(0)	2299699
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1807	15.2	1.0	0.3	chr20	31612699	31612830	(32831337)	C	AluSq2	SINE/Alu	(181)	132	1	2306409
2417	5.0	0.0	0.0	chr20	31613248	31613546	(32830621)	C	AluY	SINE/Alu	(11)	300	2	2306411
354	22.0	10.4	3.3	chr20	32270439	32270623	(32173544)	C	MIRc	SINE/MIR	(15)	253	38	2308068
360	29.8	9.3	0.0	chr20	32653164	32653321	(31790846)	C	MIRc	SINE/MIR	(12)	196	22	2308924
17	8.5	2.3	6.8	chr20	33667260	33667302	(30776865)	+	G-rich	Low_complexity	1	44	(0)	2311305
11	21.1	2.5	2.4	chr20	33667534	33667573	(30776594)	+	(GGCGCG)n	Simple_repeat	1	41	(0)	2311306
1008	27.7	6.1	3.8	chr20	33947611	33947978	(30496189)	C	MamGypLTR3a	LTR/Gypsy	(4)	977	601	2311980
319	28.6	16.6	1.8	chr20	33947979	33948142	(30496025)	+	L2a	LINE/L2	3234	3426	(0)	2311981
12	9.8	0.0	0.0	chr20	33948153	33948174	(30495993)	+	(ATGC)n	Simple_repeat	1	22	(0)	2311982
419	33.3	4.8	0.6	chr20	33948262	33948439	(30495728)	C	MER117	DNA/hAT-Charlie	(2)	195	10	2311983
315	28.4	0.0	0.0	chr20	35619822	35619888	(28824279)	+	MIRb	SINE/MIR	119	185	(83)	2315689
522	28.1	6.3	4.3	chr20	35619918	35619963	(28824204)	C	MIRb	SINE/MIR	(28)	240	201	2315690
20	13.4	0.0	4.4	chr20	36863794	36863838	(27580329)	+	GA-rich	Low_complexity	1	45	(0)	2318641
14	10.5	6.5	0.0	chr20	36863902	36863932	(27580235)	+	(CCT)n	Simple_repeat	1	33	(0)	2318642
1381	14.2	1.9	3.1	chr20	38242437	38242697	(26201470)	C	Tigger5	DNA/TcMar-Tigger	(0)	2406	2149	2321711
24	21.6	5.3	0.0	chr20	38242790	38242864	(26201303)	+	(TTTA)n	Simple_repeat	1	79	(0)	2321712
706	32.1	2.6	2.6	chr20	38243015	38243318	(26200849)	+	MamGypLTR3a	LTR/Gypsy	678	981	(0)	2321713
570	31.3	9.1	11.5	chr20	38337562	38338197	(26105970)	C	MamGypLTR3a	LTR/Gypsy	(0)	981	363	2321946
385	17.3	10.0	3.6	chr20	38612752	38612835	(25831332)	C	Charlie5	DNA/hAT-Charlie	(2533)	91	2	2322475
444	26.4	3.9	7.5	chr20	38612984	38613171	(25830996)	C	MER102a	DNA/hAT-Charlie	(98)	232	52	2322465
212	26.7	8.2	0.0	chr20	40963019	40963108	(23481059)	+	L3	LINE/CR1	3952	4049	(50)	2326787
699	26.6	3.9	0.5	chr20	40963309	40963508	(23480659)	C	MIRb	SINE/MIR	(36)	232	26	2326788
17	8.1	7.3	2.3	chr20	44531882	44531922	(19912245)	+	G-rich	Low_complexity	1	44	(0)	2333726
449	29.3	10.4	1.7	chr20	45139331	45139566	(19304601)	+	MamRep4096	DNA/hAT-Tip100	156	414	(12)	2335099
195	27.1	15.8	0.0	chr20	46255315	46255410	(18188757)	C	MIRc	SINE/MIR	(117)	151	38	2337296
13	12.1	3.6	0.0	chr20	46255707	46255734	(18188433)	+	(TCCT)n	Simple_repeat	1	29	(0)	2337297
666	18.0	0.8	6.2	chr20	47535067	47535196	(16908971)	C	AluJb	SINE/Alu	(25)	287	165	2340362
4548	14.9	2.0	2.9	chr20	47535197	47535506	(16908661)	C	LTR1A1	LTR/ERV1	(54)	745	448	2340363
204	27.1	1.7	0.0	chr20	48620336	48620394	(15823773)	+	MIR	SINE/MIR	22	81	(181)	2342464
17	18.3	0.0	2.4	chr20	48620777	48620817	(15823350)	+	A-rich	Low_complexity	1	41	(0)	2342465
14	25.6	0.0	7.2	chr20	48620875	48620943	(15823224)	+	A-rich	Low_complexity	1	69	(0)	2342465
242	34.3	2.8	5.7	chr20	48621231	48621412	(15822755)	C	MIRb	SINE/MIR	(77)	191	10	2342466
494	33.2	3.0	12.7	chr20	49545472	49545919	(14898248)	+	MamGypLTR3a	LTR/Gypsy	433	835	(146)	2344710
355	20.0	0.0	0.0	chr20	49546036	49546100	(14898067)	+	MIRb	SINE/MIR	196	260	(8)	2344711
228	34.9	2.7	0.9	chr20	49546220	49546329	(14897838)	+	LTR88a	LTR/Gypsy?	660	771	(45)	2344712
21	22.7	1.5	3.0	chr20	50931286	50931350	(13512817)	+	(CGG)n	Simple_repeat	1	66	(0)	2348044
1015	28.2	10.8	2.3	chr20	51318124	51318649	(13125518)	+	MLT1G3	LTR/ERVL-MaLR	3	578	(17)	2348896
954	13.1	1.4	0.0	chr20	52105436	52105580	(12338587)	+	MER5A1	DNA/hAT-Charlie	16	162	(4)	2350768
421	10.3	0.0	0.0	chr20	52105585	52105642	(12338525)	+	MER5A1	DNA/hAT-Charlie	107	164	(2)	2350769
881	16.6	0.6	1.3	chr20	52105642	52105800	(12338367)	C	MER5A1	DNA/hAT-Charlie	(0)	166	9	2350770
302	13.2	0.0	7.0	chr20	52105799	52105855	(12338312)	C	MER5B	DNA/hAT-Charlie	(80)	98	46	2350771
199	13.9	2.7	0.0	chr20	52105893	52105928	(12338239)	C	MER5B	DNA/hAT-Charlie	(139)	39	3	2350771
295	30.8	0.8	1.7	chr20	52760695	52760813	(11683354)	C	MamGypLTR3a	LTR/Gypsy	(19)	875	758	2352146
30	0.0	3.1	0.0	chr20	53827010	53827041	(10617126)	+	(AACTATT)n	Simple_repeat	1	33	(0)	2354452
2368	14.4	5.3	2.0	chr20	53827049	53827453	(10616714)	C	MSTC	LTR/ERVL-MaLR	(19)	409	1	2354453
684	27.5	9.2	4.1	chr20	56200527	56200884	(8243283)	+	MamGypLTR3	LTR/Gypsy	546	875	(19)	2358577
438	13.3	4.8	7.7	chr20	57258523	57258652	(7185515)	C	L1MD3	LINE/L1	(0)	7995	7870	2360856
416	31.1	7.7	0.9	chr20	58195912	58196226	(6247941)	+	L2b	LINE/L2	3080	3426	(0)	2362564
301	31.0	0.9	5.8	chr20	58196297	58196416	(6247751)	+	LTR16B2	LTR/ERVL	2	115	(347)	2362569
21	15.5	1.9	3.6	chr20	58888945	58888998	(5555169)	+	(CGCGCC)n	Simple_repeat	1	55	(0)	2363577
17	18.6	4.4	5.6	chr20	58889254	58889321	(5554846)	+	(GGC)n	Simple_repeat	1	71	(0)	2363578
1991	15.1	6.7	0.6	chr20	59531298	59531650	(4912517)	+	L1MC1	LINE/L1	5958	6333	(0)	2364624
24	46.5	1.3	0.0	chr20	61887389	61887539	(2556628)	+	(CA)n	Simple_repeat	1	153	(0)	2367860
18	17.9	0.0	4.2	chr20	62136866	62136913	(2307254)	+	(TTTCTT)n	Simple_repeat	1	48	(0)	2368184
16	4.5	0.0	0.0	chr20	62137116	62137138	(2307029)	+	(AGC)n	Simple_repeat	1	23	(0)	2368185
13	16.7	4.8	2.3	chr20	62232789	62232830	(2211337)	+	(CCCCT)n	Simple_repeat	1	44	(0)	2368319
99	2.0	1.0	0.9	chr20	62476871	62476974	(1967193)	+	(TTCT)n	Simple_repeat	1	105	(0)	2368610
338	23.4	0.0	0.0	chr20	62808528	62808604	(1635563)	C	MER58B	DNA/hAT-Charlie	(14)	327	251	2368977
20	8.2	4.9	2.3	chr20	62816995	62817035	(1627132)	+	(CCGC)n	Simple_repeat	1	43	(0)	2368983
12	25.4	1.1	2.2	chr20	62972672	62972736	(1471431)	+	G-rich	Low_complexity	1	64	(0)	2369143
15	13.4	3.0	0.0	chr20	63006809	63006841	(1437326)	+	(GCCGCT)n	Simple_repeat	1	34	(0)	2369181
21	11.2	2.6	0.0	chr20	63007119	63007157	(1437010)	+	(CGCGG)n	Simple_repeat	1	40	(0)	2369182
1521	30.1	5.5	2.1	chr20	63434467	63435083	(1009084)	C	L1MB5	LINE/L1	(36)	6138	5500	2369568
1732	17.4	4.6	0.0	chr20	63435120	63435407	(1008760)	+	AluJb	SINE/Alu	1	302	(10)	2369569
278	33.0	0.9	2.6	chr20	64101981	64102095	(342072)	+	MIRb	SINE/MIR	67	179	(89)	2370500
13	4.3	0.0	7.1	chr20	64102346	64102373	(341794)	+	(GCCCC)n	Simple_repeat	1	28	(0)	2370501
458	24.3	7.6	1.0	chr20	64119945	64120138	(324029)	+	MIRc	SINE/MIR	2	194	(68)	2370515
28	0.0	0.0	0.0	chr20	64120329	64120359	(323808)	+	(AG)n	Simple_repeat	1	31	(0)	2370516
43	0.0	0.0	0.0	chr20	64120360	64120396	(323771)	+	(GT)n	Simple_repeat	1	37	(0)	2370517
206	25.8	8.2	2.2	chr20	64120719	64120741	(323426)	C	L2c	LINE/L2	(41)	3346	3325	2370518
2711	10.7	8.2	0.0	chr20	64120742	64121134	(323033)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2370519
491	29.5	13.2	6.7	chr20	64145317	64145865	(298302)	+	MamGypLTR3a	LTR/Gypsy	331	920	(61)	2370555
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
605	6.4	0.9	3.6	chr20	64286700	64287633	(156534)	+	(AGGGTT)n	Simple_repeat	1	942	(0)	2370666
691	28.9	5.6	4.6	chr21	7798459	7798741	(38911242)	C	MamGypLTR3	LTR/Gypsy	(12)	882	597	2373015
330	32.3	11.2	0.6	chr21	7798761	7798919	(38911064)	+	LTR78	LTR/ERV1	739	916	(388)	2373016
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
15708	0.1	0.0	0.0	chr21	8436876	8438744	(38271239)	+	SSU-rRNA_Hsa	rRNA	1	1869	(0)	2373613
13	8.1	3.6	3.5	chr21	8438766	8438793	(38271190)	+	(CCG)n	Simple_repeat	1	29	(0)	2373614
12	18.8	2.6	2.6	chr21	8438825	8438862	(38271121)	+	(CGCGTG)n	Simple_repeat	1	39	(0)	2373615
16	8.3	0.0	0.0	chr21	8438857	8438882	(38271101)	+	(CGTT)n	Simple_repeat	1	26	(0)	2373616
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
381	17.5	1.6	0.0	chr21	9248617	9248679	(37461304)	+	AluYj4	SINE/Alu	224	287	(24)	2374342
355	21.0	6.9	0.0	chr21	9257924	9258004	(37451979)	+	MER21C	LTR/ERVL	30	116	(822)	2374357
490	25.4	1.5	5.0	chr21	9258040	9258180	(37451803)	+	MER21C	LTR/ERVL	99	234	(634)	2374357
1574	22.3	7.7	4.1	chr21	9258166	9258605	(37451378)	+	MER21C	LTR/ERVL	457	913	(25)	2374357
1951	29.8	4.7	5.4	chr21	9816509	9817787	(36892196)	C	SST1	Satellite/centr	(11)	1552	284	2374893
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
8109	7.3	0.2	2.1	chr21	10119088	10120345	(36589638)	C	SST1	Satellite/centr	(0)	1232	1	2375298
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
18	13.5	3.7	5.4	chr21	10521905	10521958	(36188025)	+	(CCTC)n	Simple_repeat	1	56	(0)	2375691
23121	9.8	2.3	0.7	chr21	17685312	17689960	(29020023)	C	L1PB1	LINE/L1	(1743)	5119	339	2382062
2424	11.4	0.3	0.0	chr21	25800972	25801278	(20908705)	C	AluSx1	SINE/Alu	(4)	308	1	2393046
1046	29.2	12.0	8.2	chr21	25801280	25802192	(20907791)	+	L1MEi	LINE/L1	106	1057	(1223)	2393047
17134	14.8	3.8	0.5	chr21	30408694	30410680	(16299303)	+	L1PA16	LINE/L1	1113	3163	(3686)	2399756
7670	8.4	11.3	0.0	chr21	31087647	31088758	(15621225)	C	LTR12D	LTR/ERV1	(0)	1254	1	2400740
2443	19.2	2.6	5.2	chr21	31088759	31088786	(15621197)	C	L1MB4	LINE/L1	(338)	5842	5824	2400739
1675	13.2	0.0	5.9	chr21	31514431	31514703	(15195280)	+	AluSx1	SINE/Alu	36	292	(20)	2401507
589	21.9	15.2	0.0	chr21	31515305	31515455	(15194528)	+	MER5A	DNA/hAT-Charlie	1	178	(11)	2401508
607	25.1	16.2	1.8	chr21	31723501	31723784	(14986199)	+	MER97d	DNA/hAT-Tip100	873	1205	(0)	2401940
33	17.4	1.4	1.4	chr21	31732160	31732232	(14977751)	+	(CGCCC)n	Simple_repeat	1	74	(0)	2401953
12	15.7	2.6	5.0	chr21	31732235	31732273	(14977710)	+	G-rich	Low_complexity	1	40	(0)	2401954
19	15.1	4.5	0.0	chr21	31732278	31732321	(14977662)	+	(CGG)n	Simple_repeat	1	46	(0)	2401955
340	31.5	3.5	0.0	chr21	31732809	31732919	(14977064)	C	L2c	LINE/L2	(24)	3363	3249	2401956
34	2.6	2.4	2.3	chr21	33026738	33026779	(13683204)	+	(CT)n	Simple_repeat	1	43	(0)	2404182
13	22.1	0.0	0.0	chr21	33027109	33027140	(13682843)	+	(TCG)n	Simple_repeat	1	32	(0)	2404183
15	25.1	7.7	2.7	chr21	33027440	33027543	(13682440)	+	(CGCACCC)n	Simple_repeat	1	112	(0)	2404184
1322	10.5	0.0	0.0	chr21	33361635	33361832	(13348151)	C	AluSq2	SINE/Alu	(0)	313	113	2404791
33	22.6	1.6	6.2	chr21	33642406	33642532	(13067451)	+	G-rich	Low_complexity	1	129	(0)	2405359
13	25.8	1.9	3.6	chr21	33642732	33642785	(13067198)	+	(GGC)n	Simple_repeat	1	55	(0)	2405360
13	27.3	0.0	3.6	chr21	33642812	33642867	(13067116)	+	(CGCCCCG)n	Simple_repeat	1	56	(0)	2405361
470	28.8	8.4	1.6	chr21	34510344	34510678	(12199305)	+	L2a	LINE/L2	2888	3240	(186)	2406754
1478	22.3	12.1	8.2	chr21	36990585	36991247	(9718736)	C	MER21C	LTR/ERVL	(130)	808	18	2410806
12	24.3	0.0	0.0	chr21	37006634	37006667	(9703316)	+	(CCCCG)n	Simple_repeat	1	34	(0)	2410846
2728	12.6	16.0	4.4	chr21	37566987	37567526	(9142457)	+	LTR18B	LTR/ERVL	1	614	(0)	2411798
2130	11.9	1.3	0.0	chr21	37579027	37579320	(9130663)	C	AluSc	SINE/Alu	(10)	299	2	2411823
1274	28.2	4.6	5.9	chr21	37579321	37579542	(9130441)	C	L1MEf	LINE/L1	(5480)	1557	1119	2411822
202	27.0	18.7	0.0	chr21	37608632	37608731	(9101252)	+	MIRb	SINE/MIR	123	245	(23)	2411863
2117	7.2	0.0	0.0	chr21	40318073	40318348	(6391635)	+	L1PA3	LINE/L1	5880	6155	(0)	2415834
1946	19.3	6.0	2.5	chr21	42117094	42117387	(4592596)	C	L1MB7	LINE/L1	(180)	6004	5700	2418458
367	28.5	6.6	10.3	chr21	42609717	42610014	(4099969)	C	MLT1I	LTR/ERVL-MaLR	(43)	368	83	2419087
528	22.6	12.1	4.0	chr21	42610106	42610331	(4099652)	C	L1MEg	LINE/L1	(2005)	4141	3895	2419088
2671	4.2	0.0	0.6	chr21	42863826	42864137	(3845846)	+	AluY	SINE/Alu	2	311	(0)	2419452
320	18.8	9.0	2.9	chr21	42864138	42864241	(3845742)	+	L1ME2z	LINE/L1	6330	6440	(4)	2419453
240	14.3	0.0	0.0	chr21	44410011	44410052	(2299931)	C	L1MB7	LINE/L1	(1372)	4774	4733	2421708
266	11.9	0.0	0.0	chr21	44410093	44410134	(2299849)	C	L1MB7	LINE/L1	(1372)	4774	4733	2421708
249	14.3	0.0	0.0	chr21	44410134	44410175	(2299808)	C	L1MB7	LINE/L1	(1372)	4774	4733	2421708
8758	3.9	0.2	0.1	chr21	44705021	44706090	(2003893)	+	MER11C	LTR/ERVK	1	1071	(0)	2422049
45	21.2	4.0	6.7	chr21	44706298	44706498	(2003485)	+	(CACG)n	Simple_repeat	1	209	(0)	2422050
1047	21.6	8.7	2.3	chr21	44793709	44794031	(1915952)	+	L1MC5	LINE/L1	6966	7262	(2042)	2422157
279	21.0	0.0	1.6	chr21	45556445	45556507	(1153476)	C	MER102c	DNA/hAT-Charlie	(196)	135	74	2422927
6541	12.7	4.3	1.3	chr21	46143385	46144361	(565622)	+	LTR13	LTR/ERVK	1	1007	(0)	2423545
183	31.2	11.1	0.0	chr21	46161116	46161179	(548804)	C	L2c	LINE/L2	(70)	3317	3246	2423559
1456	12.4	6.4	8.2	chr21	46289754	46289936	(420047)	C	MER65A	LTR/ERV1	(125)	320	132	2423737
270	11.9	0.0	0.0	chr21	46289940	46289981	(420002)	C	MER65A	LTR/ERV1	(357)	174	133	2423737
275	11.6	0.0	0.0	chr21	46289988	46290030	(419953)	C	MER65A	LTR/ERV1	(357)	174	132	2423737
738	17.6	4.2	7.6	chr21	46290034	46290205	(419778)	C	MER65A	LTR/ERV1	(357)	174	9	2423737
2276	9.8	0.0	0.7	chr21	46290207	46290502	(419481)	C	AluSg	SINE/Alu	(15)	295	2	2423739
13369	3.5	1.6	0.0	chr21	46698115	46699841	(10142)	+	TAR1	Satellite/telo	314	2069	(42)	2424293
31	33.5	2.0	2.6	chr22	11284966	11285118	(39533350)	+	GA-rich	Low_complexity	1	156	(0)	2424997
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
5492	25.2	7.0	0.9	chr22	11917727	11919230	(38899238)	+	MSTA-int	LTR/ERVL-MaLR	28	1631	(0)	2425534
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
22	15.6	4.2	5.3	chr22	15689653	15689724	(35128744)	+	(GGCTT)n	Simple_repeat	1	75	(0)	2426683
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
21	16.0	4.1	0.0	chr22	16601252	16601300	(34217168)	+	(CCGGAG)n	Simple_repeat	1	51	(0)	2427582
15	20.4	0.0	2.4	chr22	16601640	16601680	(34216788)	+	(GAGC)n	Simple_repeat	1	41	(0)	2427583
16	24.2	0.0	0.0	chr22	16601729	16601772	(34216696)	+	(CCGCGCC)n	Simple_repeat	1	44	(0)	2427584
19	16.5	7.4	0.0	chr22	16601829	16601882	(34216586)	+	(GCCC)n	Simple_repeat	1	58	(0)	2427585
18	7.5	0.0	0.0	chr22	16601986	16602013	(34216455)	+	(GCG)n	Simple_repeat	1	28	(0)	2427586
15	12.2	0.0	0.0	chr22	17120321	17120347	(33698121)	+	(GTG)n	Simple_repeat	1	27	(0)	2428248
15	20.1	0.0	0.0	chr22	17120597	17120630	(33697838)	+	(GCA)n	Simple_repeat	1	34	(0)	2428249
22	23.9	0.0	0.0	chr22	17120740	17120793	(33697675)	+	GA-rich	Low_complexity	1	54	(0)	2428250
248	12.9	3.9	2.6	chr22	18891846	18892362	(31926106)	+	(TATAATA)n	Simple_repeat	1	537	(0)	2431165
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
1665	16.9	3.1	1.4	chr22	19321043	19321326	(31497142)	+	AluJb	SINE/Alu	1	289	(23)	2431800
2499	18.8	9.1	2.1	chr22	19321327	19321991	(31496477)	+	L1MD1	LINE/L1	5324	6039	(203)	2431785
14	12.7	1.9	9.4	chr22	19523387	19523438	(31295030)	+	G-rich	Low_complexity	1	53	(0)	2432135
20	22.0	4.7	4.4	chr22	19724293	19724378	(31094090)	+	(GCT)n	Simple_repeat	1	90	(0)	2432484
542	21.4	1.8	3.0	chr22	19766370	19766600	(31051868)	C	LTR12E	LTR/ERV1	(886)	436	209	2432514
15	19.6	0.0	0.0	chr22	19766708	19766752	(31051716)	+	(CACCCG)n	Simple_repeat	1	45	(0)	2432515
27	12.0	0.0	0.0	chr22	19766763	19766807	(31051661)	+	(GCC)n	Simple_repeat	1	45	(0)	2432516
24	19.6	1.7	1.6	chr22	19962545	19962628	(30855840)	+	(CTG)n	Simple_repeat	1	84	(0)	2432755
11	15.4	8.9	2.0	chr22	20430862	20430906	(30387562)	+	(GGCCACT)n	Simple_repeat	1	49	(0)	2433305
12	31.0	0.0	1.9	chr22	20430944	20430996	(30387472)	+	(CCCCCCT)n	Simple_repeat	1	53	(0)	2433306
290	35.0	7.2	2.7	chr22	20456204	20456388	(30362080)	+	L2a	LINE/L2	3228	3421	(5)	2433339
886	22.1	10.4	1.0	chr22	20563898	20564185	(30254283)	+	L1MB7	LINE/L1	5673	5990	(194)	2433560
94	18.3	1.5	1.5	chr22	20564452	20564654	(30253814)	+	(CAG)n	Simple_repeat	1	206	(0)	2433561
12	19.6	2.9	0.0	chr22	20916855	20916889	(29901579)	+	(TCACTC)n	Simple_repeat	1	36	(0)	2434226
17	23.0	0.0	7.1	chr22	20979391	20979460	(29839008)	+	G-rich	Low_complexity	1	70	(0)	2434357
364	13.0	6.8	0.0	chr22	22156609	22156677	(28661791)	C	L1PREC2	LINE/L1	(1)	6159	6086	2436547
774	25.3	3.4	3.4	chr22	22156678	22156783	(28661685)	+	L1MDb	LINE/L1	1112	1219	(5190)	2436546
3765	20.1	2.9	2.0	chr22	22463622	22464929	(28353539)	C	HUERS-P3-int	LTR/ERV1	(7513)	1406	1	2436873
12	21.6	0.0	4.9	chr22	22576440	22576480	(28241988)	+	G-rich	Low_complexity	1	41	(0)	2437106
194	26.7	3.8	5.1	chr22	23627547	23627626	(27190842)	C	L2a	LINE/L2	(18)	3408	3279	2438625
8110	4.8	0.6	0.2	chr22	23929910	23930912	(26887556)	+	LTR13	LTR/ERVK	1	1007	(0)	2439224
194	26.9	2.9	5.6	chr22	25334285	25334355	(25484113)	+	L2a	LINE/L2	3340	3408	(18)	2442017
2419	6.2	0.0	0.3	chr22	25334493	25334784	(25483684)	C	AluY	SINE/Alu	(20)	291	1	2442018
518	19.1	0.0	0.0	chr22	28829377	28829481	(21988987)	C	Charlie18a	DNA/hAT-Charlie	(168)	174	70	2449317
290	30.4	19.2	1.2	chr22	28829810	28829979	(21988489)	+	MIRb	SINE/MIR	38	245	(23)	2449318
16	22.0	0.0	3.9	chr22	29388334	29388384	(21430084)	+	(TGACCCC)n	Simple_repeat	1	51	(0)	2450443
1779	13.3	1.1	2.8	chr22	29470710	29470994	(21347474)	C	AluJb	SINE/Alu	(27)	285	6	2450638
368	30.6	11.4	3.7	chr22	29701436	29701676	(21116792)	+	MIR	SINE/MIR	1	262	(0)	2451141
199	30.4	3.8	3.8	chr22	29701790	29701895	(21116573)	+	L2b	LINE/L2	3240	3345	(30)	2451142
792	25.9	8.9	8.2	chr22	29915723	29916125	(20902343)	C	L1ME1	LINE/L1	(4044)	2356	1932	2451638
11	14.6	7.5	2.3	chr22	30387669	30387708	(20430760)	+	(GGAGCA)n	Simple_repeat	1	43	(0)	2452492
1908	14.8	2.0	0.0	chr22	30485063	30485360	(20333108)	+	AluJr	SINE/Alu	5	308	(4)	2452716
289	26.6	4.1	5.2	chr22	30485637	30485790	(20332678)	+	MIRb	SINE/MIR	23	179	(89)	2452717
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
256	34.7	6.1	9.9	chr22	33756242	33756705	(17061763)	C	L2b	LINE/L2	(0)	3375	2931	2459709
222	37.0	2.5	2.5	chr22	34741771	34741892	(16076576)	C	L3	LINE/CR1	(7)	4092	3971	2461559
2344	13.4	0.0	0.0	chr22	34742272	34742578	(16075890)	+	AluSg	SINE/Alu	1	307	(3)	2461560
641	25.5	4.4	0.7	chr22	35231473	35231626	(15586842)	C	Arthur1A	DNA/hAT-Tip100	(17)	160	1	2462532
292	24.3	3.7	12.7	chr22	35231894	35232011	(15586457)	+	MIR	SINE/MIR	86	192	(70)	2462533
102	13.4	3.1	1.0	chr22	36896628	36896818	(13921650)	+	GA-rich	Low_complexity	1	197	(0)	2466085
2571	17.1	3.3	4.5	chr22	36896823	36897349	(13921119)	+	MSTB-int	LTR/ERVL-MaLR	1132	1651	(0)	2466083
12	15.9	12.0	3.6	chr22	37375458	37375532	(13442936)	+	(AGCCGC)n	Simple_repeat	1	84	(0)	2467082
39	4.6	0.0	0.0	chr22	37375837	37375881	(13442587)	+	(CCT)n	Simple_repeat	1	45	(0)	2467083
15	12.3	2.6	5.0	chr22	37647351	37647389	(13171079)	+	GA-rich	Low_complexity	1	40	(0)	2467720
349	23.8	9.0	0.0	chr22	37824431	37824531	(12993937)	+	MIRb	SINE/MIR	51	161	(107)	2468150
13	10.4	2.9	5.6	chr22	37824639	37824673	(12993795)	+	G-rich	Low_complexity	1	36	(0)	2468151
232	26.5	14.6	0.8	chr22	37933800	37933917	(12884551)	C	MIR3	SINE/MIR	(65)	143	7	2468446
2468	5.3	0.0	1.6	chr22	38114182	38114484	(12703984)	C	AluY	SINE/Alu	(13)	298	1	2468822
306	33.0	2.8	1.9	chr22	38114512	38114616	(12703852)	+	MIR3	SINE/MIR	64	169	(39)	2468823
12	7.4	0.0	11.1	chr22	38214831	38214866	(12603602)	+	(CCCGG)n	Simple_repeat	1	36	(0)	2469052
667	18.4	7.3	1.3	chr22	38412374	38412500	(12405968)	C	MER33	DNA/hAT-Charlie	(187)	137	1	2469428
210	31.2	5.9	0.0	chr22	38412667	38412762	(12405706)	+	MIRc	SINE/MIR	62	163	(105)	2469430
265	27.6	4.8	3.9	chr22	38413411	38413512	(12404956)	C	MIRb	SINE/MIR	(48)	220	118	2469431
417	35.1	8.4	3.4	chr22	38698342	38698668	(12119800)	C	AmnSINE1	SINE/5S-Deu-L2	(228)	347	3	2470131
1925	10.4	4.0	0.8	chr22	38698766	38699033	(12119435)	C	AluSx	SINE/Alu	(12)	300	24	2470132
1467	24.2	14.1	1.2	chr22	40618390	40618583	(10199885)	C	L2a	LINE/L2	(248)	3178	2951	2473926
2059	13.5	1.0	0.0	chr22	40618682	40618977	(10199491)	+	AluSz	SINE/Alu	1	299	(13)	2473928
15	15.5	3.5	0.0	chr22	40618980	40619008	(10199460)	+	(AT)n	Simple_repeat	1	30	(0)	2473929
2398	9.9	0.3	0.3	chr22	42437131	42437442	(8381026)	C	AluSx1	SINE/Alu	(0)	312	1	2478050
187	18.4	0.0	2.6	chr22	42437452	42437490	(8380978)	C	L2c	LINE/L2	(16)	3371	3334	2478051
253	33.6	3.2	0.0	chr22	42437607	42437728	(8380740)	+	Tigger16a	DNA/TcMar-Tigger	102	227	(730)	2478052
498	26.2	18.6	2.5	chr22	43060196	43060467	(7758001)	+	LTR16	LTR/ERVL	11	327	(111)	2479482
317	34.0	6.0	2.4	chr22	43060495	43060702	(7757766)	C	MIRb	SINE/MIR	(40)	228	13	2479483
196	33.0	7.8	3.3	chr22	43231110	43231291	(7587177)	+	L2c	LINE/L2	3019	3209	(178)	2479853
187	32.8	7.8	2.5	chr22	43743119	43743240	(7075228)	+	X7C_LINE	LINE/CR1	99	227	(9)	2480699
407	31.7	10.2	1.3	chr22	43743382	43743614	(7074854)	+	MIRb	SINE/MIR	3	258	(10)	2480700
2420	7.8	0.0	1.9	chr22	45573394	45573701	(5244767)	+	AluSx3	SINE/Alu	1	302	(9)	2484186
669	29.9	4.3	3.0	chr22	45573702	45573930	(5244538)	+	L1ME3B	LINE/L1	6002	6241	(1)	2484185
241	33.6	3.2	1.6	chr22	45577980	45578103	(5240365)	+	MIR3	SINE/MIR	46	171	(37)	2484196
23	5.8	2.8	0.0	chr22	45978685	45978720	(4839748)	+	(GCGGGC)n	Simple_repeat	1	37	(0)	2484825
17	25.5	0.0	5.6	chr22	46263265	46263336	(4555132)	+	(GGCCCA)n	Simple_repeat	1	72	(0)	2485265
2081	21.4	5.5	2.6	chr22	46758650	46759139	(4059329)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	2486017
11	13.3	5.7	2.7	chr22	46860718	46860752	(3957716)	+	(CTGGCGA)n	Simple_repeat	1	37	(0)	2486151
1148	5.3	0.0	0.0	chr22	49304799	49304931	(1513537)	+	AluYk4	SINE/Alu	158	290	(21)	2489200
211	26.7	2.2	4.3	chr22	49305601	49305694	(1512774)	C	L2b	LINE/L2	(215)	3160	3069	2489201
19	12.9	2.2	4.3	chr22	49929529	49929574	(888894)	+	(CCGCC)n	Simple_repeat	1	47	(0)	2489977
7724	8.4	1.9	0.1	chr22	50240982	50241969	(576499)	+	LTR13	LTR/ERVK	2	1007	(0)	2490365
1705	16.8	2.3	2.0	chr22	50498006	50498308	(320160)	C	AluJr	SINE/Alu	(8)	304	1	2490762
308	29.4	4.8	0.0	chr22	50498493	50498611	(319857)	C	L2b	LINE/L2	(0)	3375	3251	2490763
34	7.4	3.4	1.6	chr22	50628181	50628239	(190229)	+	(CGGGGC)n	Simple_repeat	1	61	(0)	2490987
129	22.1	7.1	1.0	chr22	50628611	50629058	(189410)	+	(GT)n	Simple_repeat	1	480	(0)	2490988
1559	9.5	2.2	4.3	chr3	10988	11771	(198283788)	C	TAR1	Satellite/telo	(11)	768	1	2492349
1258	13.9	10.6	0.8	chr3	11784	12059	(198283500)	C	LTR1A1	LTR/ERV1	(464)	373	1	2492350
392	30.9	5.8	2.4	chr3	8988059	8988224	(189307335)	+	Tigger19b	DNA/TcMar-Tigger	201	372	(178)	2506274
214	34.5	1.2	0.0	chr3	9827236	9827319	(188468240)	C	L2c	LINE/L2	(62)	3325	3241	2508043
1619	15.5	2.6	3.7	chr3	9827405	9827675	(188467884)	C	AluJb	SINE/Alu	(21)	291	24	2508044
15	11.9	2.4	7.0	chr3	10011208	10011249	(188284310)	+	(GCC)n	Simple_repeat	1	43	(0)	2508460
418	18.3	16.6	0.6	chr3	10168724	10168891	(188126668)	+	L2a	LINE/L2	2917	3108	(279)	2508823
1679	22.0	10.5	4.3	chr3	10168892	10168929	(188126630)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	472	2508824
5644	11.1	17.3	3.9	chr3	10168930	10170018	(188125541)	C	MER11A	LTR/ERVK	(0)	1266	1	2508825
14	26.0	0.0	0.0	chr3	10992265	10992305	(187303254)	+	(GACA)n	Simple_repeat	1	41	(0)	2510527
41	29.3	3.1	3.5	chr3	10992344	10992538	(187303021)	+	G-rich	Low_complexity	1	201	(0)	2510528
3638	13.2	4.1	4.8	chr3	11803394	11804078	(186491481)	+	L1PB4	LINE/L1	5476	6155	(1)	2512140
1223	20.8	2.3	1.7	chr3	11804257	11804554	(186491005)	C	L1MC5	LINE/L1	(1)	9303	9004	2512141
252	27.9	0.0	0.0	chr3	12994636	12994703	(185300856)	C	MIRc	SINE/MIR	(118)	150	83	2514433
308	21.9	11.0	0.9	chr3	12995200	12995305	(185300254)	+	MIR3	SINE/MIR	5	122	(86)	2514434
296	28.0	8.6	2.0	chr3	13229660	13229823	(185065736)	+	L2c	LINE/L2	2995	3166	(221)	2514864
721	24.3	2.4	2.6	chr3	13229803	13229986	(185065573)	+	MIR	SINE/MIR	51	235	(27)	2514865
466	28.8	14.2	1.7	chr3	13461224	13461520	(184834039)	C	MamGypLTR3a	LTR/Gypsy	(586)	395	62	2515296
363	26.0	8.0	5.9	chr3	13461708	13461928	(184833631)	+	MamGypLTR3a	LTR/Gypsy	652	877	(104)	2515297
623	26.4	11.5	0.4	chr3	13650226	13650472	(184645087)	C	L2c	LINE/L2	(79)	3308	3031	2515680
17	29.9	0.0	0.0	chr3	13650691	13650747	(184644812)	+	(GCGGT)n	Simple_repeat	1	57	(0)	2515681
14	15.4	6.7	2.1	chr3	13650739	13650783	(184644776)	+	(GGCCA)n	Simple_repeat	1	48	(0)	2515682
343	20.9	10.8	3.4	chr3	13650819	13650937	(184644622)	+	Charlie4a	DNA/hAT-Charlie	25	153	(355)	2515683
466	29.5	11.8	10.6	chr3	13762451	13762894	(184532665)	+	MLT1K	LTR/ERVL-MaLR	136	585	(10)	2515854
259	23.1	12.0	10.0	chr3	13763079	13763208	(184532351)	+	Tigger16a	DNA/TcMar-Tigger	96	228	(729)	2515855
1775	9.9	0.0	0.5	chr3	15202546	15202766	(183092793)	C	AluSx1	SINE/Alu	(91)	221	1	2518361
203	30.3	10.3	9.6	chr3	23761484	23761618	(174533941)	C	MIR3	SINE/MIR	(60)	148	13	2530712
16	19.2	7.4	0.0	chr3	25790038	25790045	(172505514)	+	(GCGCGT)n	Simple_repeat	1	57	(0)	2533813
16	19.7	0.0	4.4	chr3	25790046	25790090	(172505469)	+	(GCGT)n	Simple_repeat	1	45	(0)	2533814
230	32.6	1.3	5.8	chr3	25790364	25790519	(172505040)	C	MIR3	SINE/MIR	(37)	171	23	2533815
16	21.9	4.3	2.1	chr3	27134056	27134101	(171161458)	+	GA-rich	Low_complexity	1	48	(0)	2535638
821	24.6	11.2	5.9	chr3	27253931	27254099	(171041460)	+	LTR16C	LTR/ERVL	112	274	(215)	2535801
1179	12.3	11.7	1.5	chr3	27254100	27254305	(171041254)	+	MER30	DNA/hAT-Charlie	1	230	(0)	2535802
180	19.1	0.0	4.5	chr3	29280827	29280870	(169014689)	C	MamRTE1	LINE/RTE-BovB	(437)	3375	3334	2538964
49	27.8	0.0	0.0	chr3	29281115	29281236	(169014323)	+	(TTTT)n	Simple_repeat	1	122	(0)	2538965
192	32.4	6.3	1.3	chr3	30199499	30199573	(168095986)	C	MIR3	SINE/MIR	(5)	203	125	2540220
366	27.8	7.1	1.7	chr3	32467553	32467724	(165827835)	C	MER102b	DNA/hAT-Charlie	(155)	186	5	2543934
15	19.5	6.4	0.0	chr3	32468102	32468148	(165827411)	+	(GTT)n	Simple_repeat	1	50	(0)	2543935
2354	6.7	1.0	1.0	chr3	32468152	32468448	(165827111)	C	AluSx1	SINE/Alu	(15)	297	1	2543936
25	14.2	2.9	5.6	chr3	32817998	32818066	(165477493)	+	(CTC)n	Simple_repeat	1	71	(0)	2544752
15	25.6	0.0	0.0	chr3	32818165	32818206	(165477353)	+	(TCG)n	Simple_repeat	1	42	(0)	2544753
14	16.6	7.3	0.0	chr3	32818199	32818239	(165477320)	+	(CGG)n	Simple_repeat	1	44	(0)	2544754
15	3.8	3.2	6.2	chr3	32818300	32818330	(165477229)	+	(CGG)n	Simple_repeat	1	32	(0)	2544754
2469	9.5	0.0	0.0	chr3	38411985	38412290	(159883269)	C	AluSx1	SINE/Alu	(6)	306	1	2553017
1930	21.0	12.7	5.1	chr3	38412291	38412505	(159883054)	C	LTR87	LTR/ERVL?	(385)	239	7	2553016
301	28.6	9.1	4.1	chr3	38412512	38412708	(159882851)	C	L1ME4c	LINE/L1	(449)	5675	5500	2553018
6854	19.8	3.1	1.3	chr3	38662393	38663850	(159631709)	+	L1MA4	LINE/L1	1502	2993	(4572)	2553355
590	24.6	5.0	5.9	chr3	40505431	40505633	(157789926)	C	MIR	SINE/MIR	(20)	242	42	2556131
20107	10.9	7.3	0.8	chr3	41508002	41510879	(156784680)	+	L1PB1	LINE/L1	636	3753	(3109)	2557561
1576	20.4	0.0	0.4	chr3	42247244	42247509	(156048050)	+	Tigger7	DNA/TcMar-Tigger	1	265	(2226)	2558780
584	18.4	0.0	1.0	chr3	42247511	42247609	(156047950)	+	Tigger7	DNA/TcMar-Tigger	2394	2491	(0)	2558781
1834	22.2	6.6	7.0	chr3	42957469	42957967	(155337592)	+	MLT1D	LTR/ERVL-MaLR	1	497	(8)	2559935
2491	5.3	8.9	0.0	chr3	43485276	43485632	(154809927)	+	LTR17	LTR/ERV1	389	780	(0)	2560696
2423	6.8	1.7	0.0	chr3	43690061	43690354	(154605205)	C	AluSp	SINE/Alu	(14)	299	1	2560994
13	25.5	0.0	0.0	chr3	43690981	43691017	(154604542)	+	(GCG)n	Simple_repeat	1	37	(0)	2560995
20	32.8	2.8	0.0	chr3	43894415	43894486	(154401073)	+	(GC)n	Simple_repeat	1	74	(0)	2561332
1441	7.8	0.0	0.0	chr3	44532776	44532955	(153762604)	C	AluSx	SINE/Alu	(8)	304	125	2562268
197	32.9	6.8	0.0	chr3	44532990	44533071	(153762488)	+	L2b	LINE/L2	3282	3369	(6)	2562265
16	9.4	5.6	2.6	chr3	44581030	44581065	(153714494)	+	(CGG)n	Simple_repeat	1	38	(0)	2562337
16	19.2	2.0	3.9	chr3	45146457	45146507	(153149052)	+	(CCTCCT)n	Simple_repeat	1	52	(0)	2563314
193	31.2	2.4	2.4	chr3	47324189	47324270	(150971289)	+	L2c	LINE/L2	3269	3350	(37)	2566924
31	9.3	0.0	0.0	chr3	47324278	47324324	(150971235)	+	(T)n	Simple_repeat	1	47	(0)	2566925
1575	19.3	3.3	2.6	chr3	47324552	47324856	(150970703)	+	AluJr	SINE/Alu	1	307	(5)	2566926
13	22.0	4.0	1.9	chr3	47418568	47418617	(150876942)	+	(CCTCTCC)n	Simple_repeat	1	52	(0)	2567101
22	21.5	1.3	5.1	chr3	47418618	47418643	(150876916)	+	(TCCCC)n	Simple_repeat	2	78	(0)	2567102
2030	10.6	0.0	0.0	chr3	47837501	47837782	(150457777)	+	AluSg	SINE/Alu	21	302	(8)	2568115
261	21.9	3.0	1.5	chr3	47990254	47990318	(150305241)	C	MER5A	DNA/hAT-Charlie	(1)	188	123	2568392
844	18.2	0.0	4.7	chr3	47990324	47990473	(150305086)	+	AluJb	SINE/Alu	1	143	(169)	2568393
182	27.3	8.3	0.0	chr3	48158240	48158294	(150137265)	C	AmnSINE1	SINE/5S-Deu-L2	(326)	249	190	2568836
273	24.2	10.3	4.3	chr3	48736994	48737244	(149558315)	+	L1ME3B	LINE/L1	5957	6240	(2)	2569809
2216	13.1	0.0	0.6	chr3	48737262	48737573	(149557986)	+	AluSx3	SINE/Alu	2	311	(0)	2569810
8999	9.6	14.5	5.5	chr3	49212569	49213994	(149081565)	C	LTR12C	LTR/ERV1	(0)	1579	3	2570846
19	0.0	0.0	0.0	chr3	49295715	49295735	(148999824)	+	(CA)n	Simple_repeat	1	21	(0)	2571013
355	31.0	12.0	4.2	chr3	49295845	49296036	(148999523)	+	MIR	SINE/MIR	8	216	(46)	2571014
2629	3.6	0.0	0.7	chr3	49802168	49802474	(148493085)	C	AluY	SINE/Alu	(6)	305	1	2572002
15	14.7	0.0	0.0	chr3	50260317	50260346	(148035213)	+	(GGAG)n	Simple_repeat	1	30	(0)	2572837
2397	9.3	0.7	0.0	chr3	50283925	50284225	(148011334)	+	AluSz6	SINE/Alu	2	304	(8)	2572867
453	30.1	11.2	7.5	chr3	50284226	50284447	(148011112)	+	L1M5	LINE/L1	5369	5609	(515)	2572866
2028	13.6	0.3	1.3	chr3	50284448	50284748	(148010811)	+	AluJb	SINE/Alu	1	298	(14)	2572868
23	23.6	4.7	3.6	chr3	50503295	50503400	(147792159)	+	G-rich	Low_complexity	1	111	(0)	2573122
29	16.5	5.3	1.2	chr3	50503439	50503514	(147792045)	+	(GCGGCG)n	Simple_repeat	1	80	(0)	2573123
15	12.6	3.7	0.0	chr3	50503690	50503721	(147791838)	+	(CT)n	Simple_repeat	1	33	(0)	2573124
2253	11.5	0.0	0.0	chr3	53374755	53375050	(144920509)	+	AluSz	SINE/Alu	1	296	(16)	2577531
289	27.9	3.5	3.5	chr3	53375209	53375323	(144920236)	+	MIR3	SINE/MIR	32	146	(62)	2577532
2409	8.0	0.0	0.0	chr3	53375379	53375666	(144919893)	C	AluSx	SINE/Alu	(14)	298	11	2577533
323	30.2	0.8	6.5	chr3	55405561	55405698	(142889861)	+	MamGypLTR3a	LTR/Gypsy	521	729	(252)	2580378
2471	10.0	0.3	0.0	chr3	55405755	55406055	(142889504)	+	AluSz	SINE/Alu	1	302	(10)	2580379
2509	9.9	0.0	0.3	chr3	56446614	56446926	(141848633)	C	AluSz	SINE/Alu	(0)	312	1	2582148
661	25.8	26.2	5.7	chr3	56446927	56447155	(141848404)	C	LTR16C	LTR/ERVL	(139)	350	1	2582147
280	27.7	14.2	4.8	chr3	56447165	56447437	(141848122)	+	MamGypLTR3	LTR/Gypsy	478	780	(114)	2582146
15	13.9	0.0	0.0	chr3	57544235	57544258	(140751301)	+	(AG)n	Simple_repeat	1	24	(0)	2584133
557	14.3	0.0	0.0	chr3	58300119	58300259	(139995300)	C	MER53	DNA/hAT	(1)	192	17	2585744
2247	10.7	0.7	2.3	chr3	58300402	58300533	(139995026)	+	AluSp	SINE/Alu	2	132	(181)	2585745
1935	14.1	1.0	2.0	chr3	61715213	61715518	(136580041)	C	AluJb	SINE/Alu	(9)	303	1	2591120
2342	18.9	7.6	1.1	chr3	65080595	65081060	(133214499)	+	MLT1A0-int	LTR/ERVL-MaLR	1237	1735	(0)	2596861
560	19.6	12.6	6.7	chr3	65341842	65342005	(132953554)	C	MER5B	DNA/hAT-Charlie	(3)	175	1	2597290
281	29.8	18.1	4.3	chr3	65342006	65342333	(132953226)	C	L2	LINE/L2	(1108)	2311	1920	2597286
4673	14.6	2.0	4.6	chr3	66858319	66858946	(131436613)	+	LTR1A1	LTR/ERV1	192	799	(0)	2600001
377	22.7	7.7	3.6	chr3	66858947	66858975	(131436584)	C	MER5A1	DNA/hAT-Charlie	(115)	51	23	2600000
837	26.0	12.8	6.9	chr3	66858991	66859408	(131436151)	+	LTR16A1	LTR/ERVL	11	456	(0)	2600003
488	31.2	5.7	2.5	chr3	67114434	67114670	(131180889)	+	MIR	SINE/MIR	1	245	(17)	2600363
5994	13.2	24.2	2.4	chr3	69660494	69661717	(128633842)	+	LTR12C	LTR/ERV1	3	1579	(0)	2604565
689	29.8	6.7	2.8	chr3	69690841	69691127	(128604432)	C	L2a	LINE/L2	(0)	3426	3128	2604628
445	30.0	4.8	6.8	chr3	71416605	71417020	(126878539)	C	L2c	LINE/L2	(243)	3183	2757	2607196
1150	25.8	11.4	2.1	chr3	71680860	71681345	(126614214)	C	Tigger8	DNA/TcMar-Tigger	(0)	667	131	2607628
17	6.3	5.7	2.7	chr3	72888033	72888067	(125407492)	+	(CCT)n	Simple_repeat	1	37	(0)	2610136
37160	14.8	0.6	1.1	chr3	75551383	75558968	(122736591)	+	HERVK-int	LTR/ERVK	1	7536	(0)	2614414
6720	11.3	2.2	1.0	chr3	75723386	75724380	(122571179)	+	LTR13	LTR/ERVK	1	1007	(0)	2614627
886	23.7	3.8	2.1	chr3	75786831	75787170	(122508389)	+	MER66A	LTR/ERV1	93	438	(40)	2614704
4340	16.9	1.9	4.4	chr3	79845590	79846450	(118449109)	+	L1PB4	LINE/L1	5308	6146	(10)	2619981
272	34.0	12.8	1.9	chr3	87350481	87350696	(110944863)	+	L2c	LINE/L2	3096	3338	(49)	2629427
456	28.6	12.4	0.0	chr3	87350925	87351151	(110944408)	+	MER46C	DNA/TcMar-Tigger	79	337	(1)	2629428
10069	11.5	5.1	0.7	chr3	87473537	87475046	(110820513)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	2629575
41	0.0	0.0	0.0	chr3	93980727	93980761	(104314798)	+	(GT)n	Simple_repeat	1	35	(0)	2633633
4892	25.4	6.6	5.3	chr3	97137907	97141873	(101153686)	+	L1PA15-16	LINE/L1	3	3952	(2963)	2637461
20534	14.8	3.7	1.8	chr3	97352230	97356015	(100939544)	+	L1M1	LINE/L1	19	3887	(3678)	2637704
18777	18.1	2.9	1.9	chr3	98258152	98261238	(100034321)	C	L1MA2	LINE/L1	(4394)	3171	27	2638761
220	29.3	3.5	2.4	chr3	98546301	98546384	(99749175)	C	MIRb	SINE/MIR	(16)	252	168	2639062
2478	7.0	0.0	0.7	chr3	101561335	101561645	(96733914)	C	AluSz	SINE/Alu	(0)	312	1	2643181
13911	20.9	3.0	1.4	chr3	104100710	104104158	(94191401)	C	L1PREC2	LINE/L1	(3446)	4695	426	2646640
349	24.4	15.6	4.8	chr3	107429709	107429936	(90865623)	C	Charlie23a	DNA/hAT-Charlie	(75)	264	8	2650829
940	14.3	0.0	0.0	chr3	109098077	109098209	(89197350)	C	FLAM_A	SINE/Alu	(9)	133	1	2653236
11121	12.4	1.4	0.0	chr3	111661338	111662946	(86632613)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	2656743
190	26.9	2.9	1.5	chr3	113745275	113745342	(84550217)	C	AmnSINE1	SINE/5S-Deu-L2	(417)	158	90	2659670
13	5.2	0.0	0.0	chr3	120349090	120349109	(77946450)	+	(GCA)n	Simple_repeat	1	20	(0)	2669018
15	13.2	3.0	0.0	chr3	123328862	123328894	(74966665)	+	(GGTGAA)n	Simple_repeat	1	34	(0)	2673526
242	40.6	3.5	2.4	chr3	123329096	123329264	(74966295)	+	Tigger19a	DNA/TcMar-Tigger	121	291	(32)	2673527
412	15.8	8.5	0.2	chr3	125416263	125416357	(72879202)	C	MER21C	LTR/ERVL	(734)	204	127	2676975
2025	14.8	0.7	1.0	chr3	125416673	125416982	(72878577)	C	AluJo	SINE/Alu	(3)	309	1	2676976
4980	16.8	3.9	0.6	chr3	126080980	126081636	(72213923)	+	L1MA4	LINE/L1	5610	6292	(8)	2678102
1438	22.1	10.7	4.4	chr3	126120905	126121340	(72174219)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	2678156
395	35.4	6.2	6.5	chr3	126121341	126121537	(72174022)	+	L1M4	LINE/L1	2782	2974	(3172)	2678155
15	23.1	1.6	4.8	chr3	127547478	127547538	(70748021)	+	G-rich	Low_complexity	1	62	(0)	2680226
89	19.5	2.2	2.6	chr3	127547665	127547888	(70747671)	+	(CCCCT)n	Simple_repeat	1	229	(0)	2680227
267	16.8	0.5	0.0	chr3	127548260	127548315	(70747244)	+	MIRb	SINE/MIR	113	170	(98)	2680228
344	27.7	11.2	2.5	chr3	129439637	129439758	(68855801)	C	MIR3	SINE/MIR	(19)	189	56	2683753
16152	15.4	4.4	6.0	chr3	134525398	134528344	(63767215)	C	L1PA8A	LINE/L1	(3865)	2898	4	2691582
3109	26.8	4.8	1.6	chr3	134629847	134630730	(63664829)	+	L1MD2	LINE/L1	5	918	(5629)	2691714
1746	23.9	8.8	0.4	chr3	134630726	134631333	(63664226)	+	L1MD2	LINE/L1	1081	1766	(4874)	2691714
2231	11.8	0.3	0.0	chr3	136671003	136671298	(61624261)	+	AluSz	SINE/Alu	1	297	(15)	2694822
1492	25.5	2.2	3.6	chr3	136695937	136696404	(61599155)	C	MER65C	LTR/ERV1	(0)	461	1	2694866
15	5.8	10.5	2.4	chr3	136751804	136751841	(61543718)	+	G-rich	Low_complexity	1	42	(0)	2695002
13	9.8	9.1	0.0	chr3	136752057	136752089	(61543470)	+	(GCTC)n	Simple_repeat	1	36	(0)	2695003
1943	26.9	3.9	11.3	chr3	137121308	137122140	(61173419)	C	L1PA15-16	LINE/L1	(4863)	1990	1268	2695666
291	33.5	11.2	4.1	chr3	138284685	138284974	(60010585)	+	L2a	LINE/L2	623	935	(2484)	2697282
218	31.6	4.9	2.5	chr3	138285192	138285311	(60010248)	+	L2a	LINE/L2	1400	1522	(1897)	2697282
933	22.6	12.8	1.7	chr3	138328843	138329189	(59966370)	+	Charlie29a	DNA/hAT-Charlie	329	719	(0)	2697341
283	31.4	9.2	8.5	chr3	138594821	138595293	(59700266)	C	MamGypLTR3	LTR/Gypsy	(236)	658	182	2697757
606	28.6	10.8	2.7	chr3	138915037	138915334	(59380225)	+	L2a	LINE/L2	3094	3418	(8)	2698509
182	25.8	9.6	1.5	chr3	138915350	138915416	(59380143)	C	L2a	LINE/L2	(47)	3379	3307	2698510
320	33.6	0.8	0.0	chr3	138923789	138923916	(59371643)	C	LTR88a	LTR/Gypsy?	(434)	382	254	2698531
761	29.9	7.6	8.1	chr3	138923932	138924328	(59371231)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	201	2698532
6917	11.9	1.5	1.6	chr3	140815567	140816628	(57478931)	+	L1MC1	LINE/L1	5039	6105	(228)	2701353
2456	18.8	0.4	4.4	chr3	140816629	140817133	(57478426)	C	MER66B	LTR/ERV1	(0)	486	2	2701354
354	28.8	7.5	2.0	chr3	141737830	141738029	(56557530)	C	L2a	LINE/L2	(0)	3426	3165	2702770
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
220	25.0	7.0	2.4	chr3	149393523	149393604	(48901955)	+	MER91C	DNA/hAT-Tip100	32	117	(23)	2713511
717	21.0	8.3	0.0	chr3	149393605	149393780	(48901779)	+	L1ME4b	LINE/L1	50	241	(651)	2713512
10304	5.4	8.8	3.9	chr3	151927973	151929469	(46366090)	+	LTR12C	LTR/ERV1	3	1579	(0)	2717473
617	27.2	8.3	8.3	chr3	156151479	156151923	(42143636)	C	L1MC4	LINE/L1	(0)	8042	7598	2723649
16	6.1	8.8	0.0	chr3	156816142	156816175	(41479384)	+	(GCGCT)n	Simple_repeat	1	37	(0)	2724604
4241	13.0	1.6	6.3	chr3	157238307	157239163	(41056396)	C	L1MA8	LINE/L1	(72)	6219	5404	2725202
237	14.6	0.0	0.0	chr3	157239164	157239204	(41056355)	C	L1MA8	LINE/L1	(728)	5426	5386	2725202
1116	20.6	14.3	11.1	chr3	157542047	157542531	(40753028)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	2725645
34	0.0	0.0	0.0	chr3	157542565	157542593	(40752966)	+	(GT)n	Simple_repeat	1	29	(0)	2725646
22	3.8	0.0	0.0	chr3	157542594	157542620	(40752939)	+	(CG)n	Simple_repeat	1	27	(0)	2725647
15	26.4	0.0	0.0	chr3	158098206	158098250	(40197309)	+	G-rich	Low_complexity	1	45	(0)	2726357
12	19.8	2.3	4.4	chr3	158732338	158732381	(39563178)	+	G-rich	Low_complexity	1	45	(0)	2727205
296	28.2	6.6	6.0	chr3	159253131	159253281	(39042278)	+	Tigger16a	DNA/TcMar-Tigger	276	427	(530)	2727990
13	15.6	0.0	7.3	chr3	159988976	159989016	(38306543)	+	(AGACAG)n	Simple_repeat	1	41	(0)	2729076
544	18.5	31.1	7.4	chr3	160039291	160039615	(38255944)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	2729164
819	25.4	10.4	3.1	chr3	160921308	160921697	(37373862)	C	MamRep1151	LTR?	(5)	704	283	2730562
2583	34.8	3.1	3.1	chr3	163042193	163043140	(35252419)	C	MER84-int	LTR/ERV1	(1687)	3267	2325	2733338
926	33.3	6.5	6.1	chr3	163043209	163044104	(35251455)	C	MER84-int	LTR/ERV1	(2777)	2177	1278	2733338
6226	7.6	29.0	0.2	chr3	166423795	166424916	(31870643)	+	LTR12C	LTR/ERV1	3	1579	(0)	2737497
273	36.0	3.4	4.6	chr3	167903815	167904062	(30391497)	+	L2a	LINE/L2	3130	3421	(5)	2739346
19	18.5	4.0	0.0	chr3	169149773	169149824	(29145735)	+	(TCATTA)n	Simple_repeat	1	54	(0)	2740989
3239	11.7	0.0	10.0	chr3	169813845	169814480	(28481079)	C	LTR1A1	LTR/ERV1	(42)	795	205	2741850
2093	9.4	0.7	3.6	chr3	170188951	170189257	(28106302)	+	AluSq2	SINE/Alu	1	298	(15)	2742530
332	24.5	1.7	0.2	chr3	170189590	170189671	(28105888)	+	MIRb	SINE/MIR	8	98	(170)	2742531
605	29.4	7.1	0.9	chr3	170189746	170189968	(28105591)	+	L2a	LINE/L2	2631	2868	(551)	2742532
15	16.8	1.9	7.3	chr3	170356808	170356861	(27938698)	+	G-rich	Low_complexity	1	55	(0)	2742884
13	14.4	3.2	0.0	chr3	170357188	170357218	(27938341)	+	G-rich	Low_complexity	1	32	(0)	2742885
15	20.3	4.4	0.0	chr3	170357245	170357255	(27938304)	+	GA-rich	Low_complexity	1	46	(0)	2742886
12	18.4	0.0	3.0	chr3	170357256	170357288	(27938271)	+	G-rich	Low_complexity	1	33	(0)	2742887
18	16.9	4.2	2.0	chr3	170357487	170357534	(27938025)	+	(GGC)n	Simple_repeat	1	50	(0)	2742888
13	15.0	0.0	8.9	chr3	170357539	170357583	(27937976)	+	(CTCCC)n	Simple_repeat	1	45	(0)	2742889
12	15.8	0.0	3.3	chr3	170357586	170357615	(27937944)	+	(GGC)n	Simple_repeat	1	30	(0)	2742890
28	20.9	1.3	2.6	chr3	170357707	170357805	(27937754)	+	(GGC)n	Simple_repeat	1	97	(0)	2742891
291	23.5	1.4	5.6	chr3	170690310	170690381	(27605178)	+	MER5B	DNA/hAT-Charlie	41	109	(69)	2743437
14	0.0	8.3	0.0	chr3	170690600	170690623	(27604936)	+	(GCCTG)n	Simple_repeat	1	26	(0)	2743438
18	16.0	0.0	0.0	chr3	170908597	170908631	(27386928)	+	(GCG)n	Simple_repeat	1	35	(0)	2743786
801	18.4	2.1	0.7	chr3	172640822	172640962	(25654597)	C	FRAM	SINE/Alu	(30)	146	4	2746435
448	17.8	0.0	0.0	chr3	172641046	172641118	(25654441)	+	AluSz6	SINE/Alu	230	302	(10)	2746436
356	22.2	10.0	5.3	chr3	172666646	172666740	(25628819)	+	HUERS-P3b-int	LTR/ERV1	1	100	(7318)	2746471
808	20.1	4.3	3.8	chr3	172666748	172666933	(25628626)	+	HUERS-P3b-int	LTR/ERV1	440	626	(8293)	2746471
6641	19.8	2.9	3.0	chr3	172666974	172668316	(25627243)	+	HUERS-P3b-int	LTR/ERV1	764	2104	(5314)	2746471
49834	14.3	1.7	0.5	chr3	176506384	176514454	(21781105)	C	HUERS-P3-int	LTR/ERV1	(0)	8919	750	2751774
2789	22.0	2.2	2.5	chr3	176514489	176515123	(21780436)	C	HUERS-P3-int	LTR/ERV1	(8286)	633	1	2751774
2361	6.8	0.7	0.0	chr3	176813766	176814044	(21481515)	C	AluSp	SINE/Alu	(32)	281	1	2752160
540	27.7	9.7	0.2	chr3	176814176	176814379	(21481180)	C	MIRb	SINE/MIR	(16)	252	20	2752161
13	0.0	8.7	0.0	chr3	176814786	176814808	(21480751)	+	(AGAA)n	Simple_repeat	1	25	(0)	2752162
619	29.3	15.4	3.0	chr3	181103492	181103860	(17191699)	C	Tigger16a	DNA/TcMar-Tigger	(432)	525	103	2758829
67	4.0	2.6	0.0	chr3	181702036	181702113	(16593446)	+	(CA)n	Simple_repeat	1	80	(0)	2759748
16	14.7	0.0	7.0	chr3	184514108	184514150	(13781409)	+	(CTC)n	Simple_repeat	1	43	(0)	2764795
24281	10.1	2.5	0.5	chr3	187149784	187156289	(11139270)	+	L1PB1	LINE/L1	6	6865	(2)	2769668
14	12.0	8.3	0.0	chr3	194686776	194686811	(3608748)	+	(CCG)n	Simple_repeat	1	39	(0)	2781657
16	29.3	1.6	1.5	chr3	194687612	194687675	(3607884)	+	GA-rich	Low_complexity	1	65	(0)	2781658
14	22.0	2.0	3.9	chr3	195556383	195556433	(2739126)	+	(TTTTTC)n	Simple_repeat	1	52	(0)	2783257
401	30.2	6.6	2.8	chr3	195859611	195859828	(2435731)	C	Charlie18a	DNA/hAT-Charlie	(115)	227	1	2783770
21	0.0	0.0	0.0	chr3	196120980	196121002	(2174557)	+	(A)n	Simple_repeat	1	23	(0)	2784273
700	20.0	0.0	0.0	chr3	196121012	196121141	(2174418)	+	FLAM_A	SINE/Alu	1	130	(12)	2784274
4151	15.9	5.9	18.2	chr4	10199	12822	(190201733)	C	TAR1	Satellite/telo	(238)	2302	1	2788520
332	29.9	4.2	1.6	chr4	53793	53979	(190160576)	C	MER57E3	LTR/ERV1	(0)	487	296	2788568
2445	7.2	0.3	0.3	chr4	757887	758192	(189456363)	+	AluSc	SINE/Alu	1	306	(3)	2789491
13	13.2	0.0	0.0	chr4	786564	786588	(189427967)	+	(CTC)n	Simple_repeat	1	25	(0)	2789523
40	22.4	3.2	5.0	chr4	1511995	1512149	(188702406)	+	G-rich	Low_complexity	1	160	(0)	2790270
12	22.6	5.7	1.8	chr4	1513269	1513321	(188701234)	+	(GCGGCCG)n	Simple_repeat	1	56	(0)	2790271
597	20.4	2.1	0.0	chr4	1596316	1596452	(188618103)	C	L1MD2	LINE/L1	(0)	6359	6220	2790338
259	28.5	1.4	4.9	chr4	1596506	1596649	(188617906)	C	L1MD1	LINE/L1	(231)	6011	5873	2790339
59	25.4	1.9	0.0	chr4	1596769	1596922	(188617633)	+	GA-rich	Low_complexity	1	157	(0)	2790340
558	24.3	3.1	9.1	chr4	1606345	1606517	(188608038)	C	MLT1G3-int	LTR/ERVL-MaLR	(652)	837	668	2790349
1149	29.1	6.1	3.3	chr4	1606601	1607016	(188607539)	C	L1MB3	LINE/L1	(267)	5916	5483	2790351
2349	10.6	0.0	0.0	chr4	1607017	1607318	(188607237)	C	AluSz	SINE/Alu	(10)	302	1	2790352
546	22.9	3.1	0.6	chr4	1898890	1899047	(188315508)	C	L1MEf	LINE/L1	(5878)	216	55	2790791
683	27.8	4.6	0.0	chr4	1899283	1899491	(188315064)	C	MER20	DNA/hAT-Charlie	(0)	219	1	2790794
4240	17.1	6.6	3.6	chr4	2182634	2183844	(188030711)	+	L1MB7	LINE/L1	4939	6179	(5)	2791210
909	15.6	1.8	2.4	chr4	3319146	3319312	(186895243)	+	AluJo	SINE/Alu	137	302	(10)	2793057
607	34.0	10.5	1.6	chr4	3808778	3809219	(186405336)	C	L2a	LINE/L2	(5)	3421	2936	2793646
916	31.8	13.1	2.0	chr4	3809319	3810027	(186404528)	C	L2	LINE/L2	(387)	3032	2233	2793647
2226	6.0	1.0	7.8	chr4	4327143	4327473	(185887082)	C	AluY	SINE/Alu	(2)	309	2	2794511
978	25.8	15.6	6.0	chr4	4384359	4384811	(185829744)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	2794649
202	27.7	3.8	4.7	chr4	4384812	4384867	(185829688)	+	L2c	LINE/L2	3036	3093	(294)	2794648
42	0.0	0.0	0.0	chr4	4385297	4385332	(185829223)	+	(GT)n	Simple_repeat	1	36	(0)	2794650
4489	18.3	1.9	1.9	chr4	4398261	4399130	(185815425)	C	L1MB5	LINE/L1	(0)	6174	5311	2794670
1775	22.3	0.2	4.5	chr4	4725626	4726015	(185488540)	C	MLT2D	LTR/ERVL	(41)	373	1	2795343
400	31.7	6.3	2.2	chr4	4726136	4726393	(185488162)	+	MamGypLTR3	LTR/Gypsy	568	836	(145)	2795345
17	16.1	3.9	3.7	chr4	5892753	5892804	(184321751)	+	(CCGCG)n	Simple_repeat	1	54	(0)	2797371
15	24.3	2.9	4.3	chr4	5892949	5893016	(184321539)	+	(CGCC)n	Simple_repeat	1	70	(0)	2797372
30	19.9	0.0	6.5	chr4	5893053	5893144	(184321411)	+	G-rich	Low_complexity	1	92	(0)	2797373
16	23.0	0.0	5.4	chr4	7192303	7192358	(183022197)	+	GA-rich	Low_complexity	1	56	(0)	2799781
12	12.7	3.9	9.3	chr4	7192437	7192488	(183022067)	+	(GGTGGC)n	Simple_repeat	1	54	(0)	2799782
331	15.1	4.1	9.7	chr4	7238188	7238290	(182976265)	C	Tigger16a	DNA/TcMar-Tigger	(241)	716	620	2799851
335	27.0	3.9	0.0	chr4	7238444	7238543	(182976012)	C	Tigger16a	DNA/TcMar-Tigger	(747)	210	107	2799851
20	22.7	0.0	3.9	chr4	7238546	7238597	(182975958)	+	(TG)n	Simple_repeat	1	52	(0)	2799852
254	21.9	12.7	1.9	chr4	7650606	7650719	(182563836)	C	MIR1_Amn	SINE/MIR	(119)	149	23	2800484
59	1.8	0.0	0.0	chr4	7650720	7650777	(182563778)	+	(GCCCA)n	Simple_repeat	1	58	(0)	2800485
219	23.7	12.1	7.1	chr4	7650778	7650803	(182563752)	C	MIRb	SINE/MIR	(241)	27	1	2800484
32	2.9	0.0	0.0	chr4	8608127	8608161	(181606394)	+	(CCCCAGC)n	Simple_repeat	1	35	(0)	2802016
282	24.7	6.4	0.0	chr4	9844657	9844729	(180369826)	+	Tigger16a	DNA/TcMar-Tigger	122	199	(758)	2803741
391	22.6	11.7	0.3	chr4	9844733	9844870	(180369685)	+	MIR	SINE/MIR	47	197	(71)	2803742
296	20.0	5.0	6.9	chr4	10461093	10461194	(179753361)	+	MIR	SINE/MIR	50	149	(113)	2804462
12	23.1	3.7	3.6	chr4	10461415	10461468	(179753087)	+	(TGCGC)n	Simple_repeat	1	56	(0)	2804463
186	35.9	9.2	0.8	chr4	10462122	10462250	(179752305)	+	L2b	LINE/L2	2720	2860	(559)	2804464
12006	16.4	3.0	2.5	chr4	18366382	18367125	(171847430)	+	L1PA16	LINE/L1	734	1466	(5387)	2817791
44	0.0	0.0	0.0	chr4	18367126	18367165	(171847390)	+	(ACAT)n	Simple_repeat	1	40	(0)	2817792
12006	15.6	2.6	2.6	chr4	18367166	18368844	(171845711)	+	L1PA16	LINE/L1	1467	3157	(3692)	2817791
4425	15.8	17.9	8.7	chr4	22634530	22635719	(167578836)	+	LTR12E	LTR/ERV1	1	1322	(0)	2824273
581	31.5	10.7	9.2	chr4	23933900	23934682	(166279873)	+	MamGypLTR3a	LTR/Gypsy	186	981	(0)	2826272
222	25.5	6.9	1.1	chr4	25045932	25046026	(165168529)	+	L2c	LINE/L2	3020	3120	(267)	2828176
2252	8.5	0.0	0.7	chr4	25046053	25046333	(165168222)	+	AluSx1	SINE/Alu	1	279	(33)	2828177
501	21.8	7.2	1.6	chr4	25914492	25914691	(164299864)	+	MIRb	SINE/MIR	10	219	(49)	2829998
474	25.6	9.6	4.2	chr4	25914731	25914946	(164299609)	C	MIRb	SINE/MIR	(5)	263	35	2829999
8346	8.4	15.7	0.1	chr4	28116375	28117705	(162096850)	C	LTR12C	LTR/ERV1	(0)	1579	3	2833542
1671	25.9	2.4	4.1	chr4	30379790	30380628	(159833927)	C	L1PA17	LINE/L1	(4668)	2185	1453	2836636
338	15.4	7.1	0.0	chr4	30380624	30380688	(159833867)	C	L1PA17	LINE/L1	(6799)	350	281	2836636
189	27.5	6.6	9.0	chr4	38061993	38062148	(152152407)	+	MER5B	DNA/hAT-Charlie	20	171	(7)	2847153
13	21.5	4.7	0.0	chr4	38062266	38062308	(152152247)	+	(TTGTTT)n	Simple_repeat	1	45	(0)	2847154
779	19.4	1.3	15.9	chr4	40325854	40325945	(149888610)	+	MER96B	DNA/hAT-Tip100	1	94	(323)	2851762
34	0.0	0.0	0.0	chr4	40930421	40930449	(149284106)	+	(GT)n	Simple_repeat	1	29	(0)	2853138
23	7.2	0.0	0.0	chr4	40930450	40930511	(149284044)	+	(CG)n	Simple_repeat	1	62	(0)	2853139
451	34.2	7.7	5.4	chr4	41725224	41725615	(148488940)	C	Tigger16a	DNA/TcMar-Tigger	(550)	407	6	2854513
36	12.4	1.3	3.9	chr4	41880959	41881034	(148333521)	+	(TTCCC)n	Simple_repeat	1	77	(0)	2854762
34	29.4	1.6	5.4	chr4	48483646	48483828	(141730727)	+	(GGCCCC)n	Simple_repeat	1	186	(0)	2863934
15	19.6	0.0	4.4	chr4	48490998	48491042	(141723513)	+	(GGCCGA)n	Simple_repeat	1	45	(0)	2863939
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
6110	23.4	5.7	2.2	chr4	49219199	49220764	(140993791)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1651	29	2864961
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
337	27.6	3.8	2.1	chr4	52750674	52750824	(137463731)	C	MER74B	LTR/ERVL	(74)	548	292	2866700
267	20.9	2.3	9.5	chr4	53656648	53656742	(136557813)	+	Tigger16a	DNA/TcMar-Tigger	819	906	(51)	2868016
16	16.1	0.0	0.0	chr4	54234503	54234530	(135980025)	+	(T)n	Simple_repeat	1	28	(0)	2868997
1739	16.8	0.7	2.0	chr4	55592581	55592878	(134621677)	C	AluJb	SINE/Alu	(18)	294	1	2871173
220	32.4	7.1	5.9	chr4	55948393	55948628	(134265927)	C	L2c	LINE/L2	(64)	3323	3085	2871739
20	20.6	2.0	0.0	chr4	56049161	56049210	(134165345)	+	(TGC)n	Simple_repeat	1	51	(0)	2871924
14	24.6	3.3	3.2	chr4	56049218	56049278	(134165277)	+	(GCCG)n	Simple_repeat	1	63	(0)	2871925
12	13.6	6.8	4.3	chr4	56049424	56049467	(134165088)	+	G-rich	Low_complexity	1	47	(0)	2871926
289	34.2	6.8	6.8	chr4	56668267	56668501	(133546054)	C	Tigger16a	DNA/TcMar-Tigger	(609)	348	114	2873030
599	19.3	10.6	0.8	chr4	56668549	56668667	(133545888)	C	AluJr	SINE/Alu	(179)	133	2	2873033
2213	11.9	0.3	0.0	chr4	56842918	56843227	(133371328)	+	AluSx1	SINE/Alu	1	311	(1)	2873431
4200	15.0	1.7	2.4	chr4	56843228	56843806	(133370749)	+	MER50	LTR/ERV1	131	711	(23)	2873430
20	11.2	0.0	0.0	chr4	58436054	58436083	(131778472)	+	(GC)n	Simple_repeat	1	30	(0)	2875770
17	5.0	0.0	0.0	chr4	58436083	58436103	(131778452)	+	(CA)n	Simple_repeat	1	21	(0)	2875771
6196	19.0	2.1	0.8	chr4	60463663	60466347	(129748208)	+	L1PA16	LINE/L1	503	3338	(3145)	2878207
13	18.2	0.0	4.9	chr4	65670313	65670353	(124544202)	+	(GCTGAGG)n	Simple_repeat	1	41	(0)	2884662
2936	14.6	4.0	0.6	chr4	67445397	67445989	(122768566)	+	L1PA16	LINE/L1	4398	5045	(1101)	2886938
24	15.5	0.0	0.0	chr4	67446073	67446117	(122768438)	+	(CCGCCA)n	Simple_repeat	1	45	(0)	2886940
14	0.0	0.0	0.0	chr4	67446135	67446152	(122768403)	+	(GAG)n	Simple_repeat	1	18	(0)	2886941
3850	7.1	1.0	5.9	chr4	68922183	68922722	(121291833)	+	MER9a2	LTR/ERVK	1	513	(0)	2888864
4671	14.8	1.5	1.7	chr4	68922723	68922933	(121291622)	+	L1PA13	LINE/L1	5954	6163	(0)	2888863
12	17.9	9.4	1.7	chr4	68922948	68923000	(121291555)	+	(ATAATT)n	Simple_repeat	1	58	(0)	2888865
15	24.2	0.0	7.5	chr4	70505379	70505445	(119709110)	+	(TGTT)n	Simple_repeat	1	67	(0)	2890671
16	32.4	0.0	0.0	chr4	73653713	73653768	(116560787)	+	(ATACA)n	Simple_repeat	1	56	(0)	2895167
19	0.0	0.0	0.0	chr4	73653852	73653872	(116560683)	+	(T)n	Simple_repeat	1	21	(0)	2895168
3125	16.3	2.8	3.8	chr4	75547405	75548011	(114666544)	C	MER6A	DNA/TcMar-Tigger	(3)	602	2	2897598
1703	12.2	10.3	2.5	chr4	75548261	75548538	(114666017)	C	AluJb	SINE/Alu	(10)	302	1	2897599
14	0.0	0.0	0.0	chr4	75940890	75940907	(114273648)	+	(CAG)n	Simple_repeat	1	18	(0)	2898439
2229	12.3	0.0	0.0	chr4	75941333	75941640	(114272915)	C	AluSx1	SINE/Alu	(3)	309	2	2898440
28	14.7	6.6	3.7	chr4	80184410	80184485	(110030070)	+	(CT)n	Simple_repeat	1	81	(0)	2904505
362	23.2	5.7	0.0	chr4	81959865	81959963	(108254592)	+	LTR33	LTR/ERVL	361	465	(50)	2906898
38	0.0	0.0	0.0	chr4	81960092	81960124	(108254431)	+	(GT)n	Simple_repeat	1	33	(0)	2906899
258	26.0	3.8	0.0	chr4	81960189	81960265	(108254290)	C	LTR86A2	LTR/ERVL	(422)	91	12	2906896
2537	5.0	0.0	0.0	chr4	81960276	81960556	(108253999)	+	AluY	SINE/Alu	1	281	(30)	2906900
19	30.4	3.9	1.9	chr4	82900921	82901024	(107313531)	+	(GCGTG)n	Simple_repeat	1	108	(0)	2908437
14	16.4	2.9	0.0	chr4	84965922	84965955	(105248600)	+	(CCGACC)n	Simple_repeat	1	35	(0)	2911909
3411	21.8	3.7	6.1	chr4	86222784	86223651	(103990904)	+	LTR53-int	LTR/ERVL	1547	2392	(937)	2913515
1842	16.3	2.5	3.0	chr4	86223652	86224012	(103990543)	+	LTR52	LTR/ERVL	53	411	(10)	2913516
680	34.6	12.6	3.4	chr4	87058586	87059651	(103154904)	+	L2	LINE/L2	1708	2885	(534)	2914851
16	0.0	0.0	0.0	chr4	87071174	87071190	(103143365)	+	(T)n	Simple_repeat	1	17	(0)	2914870
11001	9.8	0.6	6.1	chr4	87724723	87726386	(102488169)	+	THE1B-int	LTR/ERVL-MaLR	1	1572	(8)	2915972
248	17.9	3.5	1.8	chr4	93170650	93170706	(97043849)	C	MLT1O	LTR/ERVL-MaLR	(335)	207	150	2923279
1159	30.8	13.1	2.2	chr4	93170710	93171577	(97042978)	+	L2a	LINE/L2	2348	3349	(77)	2923280
8815	8.8	14.5	0.4	chr4	94169659	94171011	(96043544)	+	LTR12C	LTR/ERV1	3	1579	(0)	2924584
32	13.7	0.0	0.0	chr4	102551348	102551397	(87663158)	+	(GT)n	Simple_repeat	1	50	(0)	2935825
261	28.8	10.5	2.5	chr4	102551514	102551670	(87662885)	+	L3	LINE/CR1	2820	2990	(1109)	2935826
247	23.5	15.0	0.0	chr4	106898310	106898394	(83316161)	+	MIR	SINE/MIR	97	196	(66)	2941383
33	0.0	0.0	0.0	chr4	108741277	108741304	(81473251)	+	(TG)n	Simple_repeat	1	28	(0)	2943982
16	14.9	0.0	0.0	chr4	108741305	108741335	(81473220)	+	(CGCGCG)n	Simple_repeat	1	31	(0)	2943983
2040	13.6	3.1	1.1	chr4	108741433	108741712	(81472843)	+	AluJb	SINE/Alu	1	286	(26)	2943984
13	19.3	0.0	10.2	chr4	109433779	109433789	(80780766)	+	(TCCC)n	Simple_repeat	1	58	(0)	2944950
13	20.3	4.3	2.0	chr4	109433790	109433836	(80780719)	+	(CCTCCCG)n	Simple_repeat	1	49	(0)	2944951
27	19.9	3.5	3.4	chr4	110636976	110637061	(79577494)	+	(TCTC)n	Simple_repeat	1	89	(0)	2946880
482	26.4	8.2	2.9	chr4	112075112	112075283	(78139272)	C	MamGypLTR3a	LTR/Gypsy	(0)	981	800	2948656
294	30.9	2.4	0.0	chr4	112075521	112075601	(78138954)	C	MamGypLTR3a	LTR/Gypsy	(420)	561	479	2948656
2125	11.7	0.7	1.0	chr4	112075688	112075978	(78138577)	+	AluSz	SINE/Alu	1	290	(22)	2948657
19408	15.8	2.8	2.1	chr4	115850646	115855859	(74358696)	+	L1PA14	LINE/L1	10	5950	(2191)	2953746
9732	15.3	3.6	1.8	chr4	117447333	117448617	(72765938)	C	L1MA4A	LINE/L1	(4774)	2089	811	2955691
2222	10.1	0.3	2.0	chr4	118264984	118265280	(71949275)	+	AluSc	SINE/Alu	2	293	(16)	2956637
856	29.5	11.1	2.9	chr4	118265281	118265367	(71949188)	+	L2a	LINE/L2	2715	2802	(617)	2956636
8853	7.9	14.5	1.0	chr4	118265368	118266730	(71947825)	+	LTR12C	LTR/ERV1	3	1579	(0)	2956638
21	23.0	2.4	4.7	chr4	119627302	119627391	(70587164)	+	(CCGCG)n	Simple_repeat	1	87	(0)	2958740
13456	17.2	3.5	3.8	chr4	121482041	121486719	(68727836)	C	L1PA15-16	LINE/L1	(2646)	4203	1	2961125
14	4.9	0.0	0.0	chr4	125315653	125315673	(64898882)	+	(GGC)n	Simple_repeat	1	21	(0)	2966466
1471	15.0	0.0	0.0	chr4	127586740	127586992	(62627563)	C	Tigger1	DNA/TcMar-Tigger	(341)	2077	1825	2969265
7987	12.6	1.9	1.2	chr4	127586993	127588195	(62626360)	+	L1PA15-16	LINE/L1	1340	2562	(4291)	2969268
5136	19.5	7.0	1.4	chr4	128190804	128192136	(62022419)	C	L1MA4	LINE/L1	(4908)	2657	1251	2970340
192	31.6	18.6	2.6	chr4	128310164	128310280	(61904275)	C	MamTip2	DNA/hAT-Tip100	(98)	207	68	2970543
652	31.4	9.6	4.8	chr4	131237346	131237780	(58976775)	C	LTR38	LTR/ERV1	(11)	545	88	2974388
8427	6.5	15.2	10.1	chr4	138087761	138089249	(52125306)	C	LTR12C	LTR/ERV1	(0)	1579	3	2982455
13814	16.4	4.6	1.5	chr4	138521472	138527621	(51686934)	+	L1PA16	LINE/L1	7	6503	(0)	2983005
13306	8.4	0.2	1.9	chr4	139633217	139634993	(50579562)	+	HERVK11-int	LTR/ERVK	1	1748	(6205)	2985010
470	20.1	13.5	3.8	chr4	139651899	139652084	(50562471)	+	MIRb	SINE/MIR	20	226	(42)	2985040
13	15.8	6.8	2.1	chr4	139734990	139735033	(50479522)	+	(GCCCGC)n	Simple_repeat	1	47	(0)	2985181
732	22.2	2.1	3.7	chr4	141654037	141654277	(48560278)	C	LTR16	LTR/ERVL	(0)	451	210	2987968
4010	25.0	9.4	2.8	chr4	143773625	143774189	(46440366)	C	L1PA16	LINE/L1	(5139)	2276	1686	2990731
317	32.1	4.9	5.8	chr4	143774191	143774517	(46440038)	C	L1PA16	LINE/L1	(5290)	1829	1506	2990731
2423	7.0	0.3	2.3	chr4	145054272	145054573	(45159982)	+	AluY	SINE/Alu	3	298	(13)	2992347
43	0.0	0.0	0.0	chr4	145054605	145054641	(45159914)	+	(GT)n	Simple_repeat	1	37	(0)	2992348
16	9.1	0.0	3.9	chr4	145054642	145054667	(45159888)	+	(CG)n	Simple_repeat	1	26	(0)	2992349
31	12.2	0.0	0.0	chr4	145054669	145054722	(45159833)	+	(TG)n	Simple_repeat	1	54	(0)	2992350
3281	22.2	2.3	9.9	chr4	147983485	147984198	(42230357)	C	L1PA17	LINE/L1	(4706)	1887	1239	2996541
778	28.7	1.4	3.7	chr4	147984252	147984548	(42230007)	C	L1PA17	LINE/L1	(6003)	870	581	2996541
2339	22.3	1.2	3.4	chr4	150210980	150211509	(40003046)	C	MLT1F	LTR/ERVL-MaLR	(30)	518	1	2999470
15	16.9	0.0	0.0	chr4	152935623	152935655	(37278900)	+	A-rich	Low_complexity	1	33	(0)	3003769
22	24.6	0.0	0.0	chr4	152935823	152935871	(37278684)	+	(GT)n	Simple_repeat	1	49	(0)	3003770
13	11.1	0.0	6.1	chr4	152936129	152936161	(37278394)	+	(GGTGGC)n	Simple_repeat	1	33	(0)	3003771
14	12.2	0.0	0.0	chr4	152936269	152936295	(37278260)	+	(CCGCC)n	Simple_repeat	1	27	(0)	3003772
18	23.2	3.2	1.6	chr4	153763686	153763772	(36450783)	+	(TCATATT)n	Simple_repeat	1	88	(0)	3005160
494	27.8	7.2	2.8	chr4	156377982	156378192	(33836363)	+	MLT1H	LTR/ERVL-MaLR	13	233	(316)	3008709
335	22.9	11.2	1.1	chr4	157045670	157045788	(33168767)	+	MamGypLTR3	LTR/Gypsy	571	727	(254)	3009609
18	11.6	0.0	7.0	chr4	157637869	157637960	(32576595)	+	(CGG)n	Simple_repeat	1	85	(0)	3010332
15	21.9	0.0	5.7	chr4	157637949	157638001	(32576554)	+	(GCGCC)n	Simple_repeat	1	53	(0)	3010333
4108	11.6	1.5	4.0	chr4	157638046	157639079	(32575476)	+	L1M1	LINE/L1	3182	4192	(3373)	3010334
1308	29.4	10.5	5.3	chr4	162732563	162733328	(27481227)	C	L1MCc	LINE/L1	(4948)	1475	666	3017106
9885	19.4	4.3	5.5	chr4	163037572	163038393	(27176162)	+	L1M1	LINE/L1	1397	1964	(5601)	3017518
2352	6.3	0.3	1.4	chr4	163038394	163038716	(27175839)	C	AluSp	SINE/Alu	(0)	313	1	3017519
946	20.0	3.3	2.4	chr4	165167676	165167885	(25046670)	+	Tigger17c	DNA/TcMar-Tigger	1	212	(976)	3020670
191	35.3	3.5	7.5	chr4	165167891	165168037	(25046518)	+	MIRb	SINE/MIR	1	141	(127)	3020671
3336	17.2	4.4	1.4	chr4	165168069	165168781	(25045774)	C	L1MB4	LINE/L1	(2)	6178	5444	3020672
10735	12.8	1.7	0.2	chr4	168202728	168204334	(22010221)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	3024496
13	18.2	0.0	0.0	chr4	168878142	168878172	(21336383)	+	(CCCCGC)n	Simple_repeat	1	31	(0)	3025461
2360	10.4	0.0	1.0	chr4	169091168	169091475	(21123080)	C	AluSq	SINE/Alu	(8)	305	1	3025803
404	30.0	2.6	0.9	chr4	169091477	169091587	(21122968)	C	MLT1J	LTR/ERVL-MaLR	(292)	220	108	3025804
1979	12.6	0.7	1.7	chr4	169091590	169091890	(21122665)	C	AluSx	SINE/Alu	(10)	302	5	3025805
12	17.6	2.4	4.7	chr4	173528998	173529039	(16685516)	+	(CCGGCGC)n	Simple_repeat	1	43	(0)	3031755
31	5.2	0.0	2.4	chr4	173529188	173529229	(16685326)	+	(GCG)n	Simple_repeat	1	42	(0)	3031756
5833	10.1	24.6	0.3	chr4	173717052	173717999	(16496556)	C	LTR12D	LTR/ERV1	(0)	1254	1	3032003
17615	8.5	1.5	1.0	chr4	173718000	173721218	(16493337)	+	L1PA10	LINE/L1	1678	4912	(1419)	3032002
1076	15.1	2.1	0.5	chr4	175054892	175055077	(15159478)	+	L1PBa	LINE/L1	1	189	(6674)	3033720
8791	12.2	5.8	5.1	chr4	175055094	175055788	(15158767)	+	L1PBa	LINE/L1	998	1850	(5013)	3033720
43	22.1	2.7	4.6	chr4	176792757	176792905	(13421650)	+	(GGC)n	Simple_repeat	1	153	(0)	3036004
508	19.0	0.3	0.4	chr4	178953265	178954225	(11260330)	+	(CACCAC)n	Simple_repeat	1	964	(0)	3038879
1151	28.5	4.1	3.2	chr4	179752308	179752738	(10461817)	C	LTR37-int	LTR/ERV1	(270)	3790	3356	3039901
1685	17.0	17.9	0.6	chr4	180665938	180666293	(9548262)	C	LOR1b	LTR/ERV1	(0)	461	43	3041085
24	18.4	4.0	5.1	chr4	182800121	182800195	(7414360)	+	(GC)n	Simple_repeat	1	78	(0)	3043907
243	18.7	15.7	6.1	chr4	183113279	183113315	(7101240)	C	L2a	LINE/L2	(452)	2967	2931	3044412
420	1.6	20.3	0.0	chr4	183113316	183113378	(7101177)	+	MADE1	DNA/TcMar-Mariner	1	79	(1)	3044415
243	18.7	15.7	6.1	chr4	183113379	183113454	(7101101)	C	L2a	LINE/L2	(489)	2930	2841	3044412
42	0.0	0.0	0.0	chr4	183113481	183113516	(7101039)	+	(TG)n	Simple_repeat	1	36	(0)	3044416
793	16.7	1.5	0.8	chr4	183113566	183113697	(7100858)	C	AluJr	SINE/Alu	(179)	133	1	3044417
78	0.0	0.0	0.0	chr4	183399075	183399143	(6815412)	+	(ACATA)n	Simple_repeat	1	69	(0)	3044871
44	1.7	3.4	0.0	chr4	183399144	183399202	(6815353)	+	(CACAA)n	Simple_repeat	1	61	(0)	3044872
359	33.9	3.6	1.1	chr4	183399203	183399390	(6815165)	C	MIR	SINE/MIR	(1)	261	69	3044873
326	5.5	1.8	1.8	chr4	185183685	185183740	(5030815)	+	MERX	DNA/TcMar-Tigger	522	577	(179)	3047841
200	26.3	0.0	3.4	chr4	186555802	186555860	(3658695)	+	MIRc	SINE/MIR	122	178	(90)	3049835
246	31.3	2.9	5.0	chr4	188796450	188796590	(1417965)	C	MIR	SINE/MIR	(56)	206	69	3053114
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
11515	0.3	16.5	0.0	chr4	190203040	190204505	(10050)	+	TAR1	Satellite/telo	314	2069	(42)	3054692
1393	22.8	2.8	0.9	chr5	1380720	1381069	(180157190)	+	MLT1A0	LTR/ERVL-MaLR	3	359	(6)	3056198
77	43.8	1.0	0.6	chr5	1381411	1381924	(180156335)	+	(CA)n	Simple_repeat	1	519	(0)	3056199
568	8.2	0.8	0.2	chr5	1539461	1540239	(179998020)	+	(GGCCACACAG)n	Simple_repeat	1	785	(0)	3056335
677	23.3	36.2	7.0	chr5	1540240	1540458	(179997801)	C	MER74A	LTR/ERVL	(121)	437	140	3056334
1006	9.3	0.7	0.0	chr5	1594932	1595071	(179943188)	C	AluJr4	SINE/Alu	(171)	141	1	3056396
17	36.3	0.0	0.0	chr5	1667559	1667624	(179870635)	+	GA-rich	Low_complexity	1	66	(0)	3056514
2187	27.8	4.6	0.2	chr5	1769581	1770221	(179768038)	+	L1MB5	LINE/L1	5504	6174	(0)	3056630
357	31.9	2.9	7.3	chr5	3075418	3075637	(178462622)	+	Tigger16a	DNA/TcMar-Tigger	82	291	(666)	3057967
616	18.1	7.6	3.3	chr5	3322298	3324431	(178213828)	+	(GT)n	Simple_repeat	1	2297	(0)	3058237
311	31.1	2.9	11.1	chr5	6820820	6821116	(174717143)	C	Tigger16a	DNA/TcMar-Tigger	(599)	358	87	3062359
1240	6.8	0.0	0.0	chr5	16161040	16161201	(165377058)	C	L1PA5	LINE/L1	(4)	6150	5989	3074610
900	16.1	6.9	5.3	chr5	16456093	16456262	(165081997)	C	AluJb	SINE/Alu	(7)	305	133	3075023
13	21.3	0.0	6.1	chr5	23951021	23951069	(157587190)	+	(TTAATAT)n	Simple_repeat	1	49	(0)	3085444
9678	6.3	11.6	1.6	chr5	23951095	23952511	(157585748)	+	LTR12C	LTR/ERV1	3	1579	(0)	3085445
12	19.3	8.5	0.0	chr5	31639189	31639235	(149899024)	+	G-rich	Low_complexity	1	51	(0)	3095275
2234	12.0	6.3	0.3	chr5	33435539	33435896	(148102363)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3098341
3873	5.1	1.1	0.1	chr5	33436168	33436796	(148101463)	C	L1PA5	LINE/L1	(650)	5504	4873	3098342
13	15.0	0.0	12.3	chr5	34914577	34914606	(146623653)	+	(TAT)n	Simple_repeat	3	57	(0)	3100630
249	32.3	8.6	2.3	chr5	34915032	34915161	(146623098)	+	MIRb	SINE/MIR	21	159	(109)	3100631
2217	11.6	0.7	0.0	chr5	42992908	42993217	(138545042)	C	AluSz	SINE/Alu	(0)	312	1	3112368
315	30.2	4.0	0.0	chr5	43390027	43390122	(138148137)	C	MamRep488	DNA/hAT-Tip100	(0)	219	120	3113023
292	30.2	7.5	3.9	chr5	43390123	43390205	(138148054)	+	MamRep1879	DNA/hAT-Tip100?	1	186	(30)	3113024
230	32.2	0.7	5.9	chr5	43397321	43397472	(138140787)	C	L1M5	LINE/L1	(3548)	2598	2455	3113030
196	33.8	7.5	3.9	chr5	51679443	51679648	(129858611)	C	L2	LINE/L2	(844)	2575	2362	3118028
1952	18.2	0.5	6.0	chr5	51679673	51680086	(129858173)	C	MLT2C1	LTR/ERVL	(0)	397	7	3118029
30	22.9	2.1	3.0	chr5	53480685	53480781	(128057478)	+	(GCGCCCC)n	Simple_repeat	1	99	(0)	3120333
1069	28.5	10.9	5.2	chr5	61357174	61357672	(120180587)	C	LTR33A_	LTR/ERVL	(0)	531	1	3132140
264	23.8	13.1	0.0	chr5	61357689	61357814	(120180445)	C	Charlie18a	DNA/hAT-Charlie	(146)	196	52	3132141
358	24.5	14.7	1.5	chr5	61358174	61358368	(120179891)	+	Tigger16a	DNA/TcMar-Tigger	460	684	(273)	3132142
12	4.1	3.5	6.7	chr5	61623851	61623879	(119914380)	+	(AGAGC)n	Simple_repeat	1	30	(0)	3132548
1265	19.5	7.7	19.5	chr5	62021317	62021895	(119516364)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	3133116
14	24.5	0.0	5.2	chr5	65925454	65925511	(115612748)	+	G-rich	Low_complexity	1	58	(0)	3138686
18	20.4	5.6	2.7	chr5	65925578	65925648	(115612611)	+	(CTGCCCC)n	Simple_repeat	1	75	(0)	3138687
20	20.9	5.3	2.5	chr5	65925814	65925888	(115612371)	+	(CCCT)n	Simple_repeat	1	79	(0)	3138688
23	11.5	0.0	0.0	chr5	65926105	65926142	(115612117)	+	(GGAC)n	Simple_repeat	1	38	(0)	3138689
14	27.2	3.5	0.0	chr5	67004157	67004213	(114534046)	+	(GCCGCG)n	Simple_repeat	1	59	(0)	3140250
341	33.6	4.0	4.0	chr5	72067858	72068083	(109470176)	+	MIRb	SINE/MIR	4	229	(39)	3148447
14	14.4	5.0	2.4	chr5	72956052	72956091	(108582168)	+	(GCGGCGC)n	Simple_repeat	1	42	(0)	3149768
29	31.5	0.0	7.3	chr5	77630068	77630145	(103908114)	+	(GGCGG)n	Simple_repeat	1	191	(0)	3156915
27	19.2	4.4	5.9	chr5	77630146	77630258	(103908001)	+	G-rich	Low_complexity	1	118	(0)	3156916
15	9.1	0.0	0.0	chr5	77630660	77630683	(103907576)	+	(GGC)n	Simple_repeat	1	24	(0)	3156917
18	16.9	0.0	0.0	chr5	77851369	77851401	(103686858)	+	(GT)n	Simple_repeat	1	33	(0)	3157269
45	33.7	2.8	0.9	chr5	77851555	77851767	(103686492)	+	(CGTGTG)n	Simple_repeat	1	217	(0)	3157270
20	19.0	4.8	1.5	chr5	77851978	77852052	(103686207)	+	(CTCCCGC)n	Simple_repeat	1	77	(0)	3157271
279	29.9	7.3	7.3	chr5	78627354	78627490	(102910769)	+	Tigger16a	DNA/TcMar-Tigger	77	213	(744)	3158351
265	26.0	3.9	3.9	chr5	78627574	78627701	(102910558)	+	MIRb	SINE/MIR	59	186	(82)	3158352
2725	21.3	1.1	2.0	chr5	82675059	82675619	(98862640)	C	Tigger9b	DNA/TcMar-Tigger	(68)	556	1	3164948
11843	19.2	2.8	2.3	chr5	85047565	85050761	(96487498)	+	L1PA15-16	LINE/L1	7	2899	(3954)	3168058
11805	16.9	1.9	1.3	chr5	89777460	89778660	(91759599)	+	L1PA8	LINE/L1	2	1244	(5217)	3173968
19	17.6	4.2	5.4	chr5	91383382	91383387	(90154872)	+	(GCGCC)n	Simple_repeat	1	24	(50)	3176169
12	24.6	3.6	3.5	chr5	91383388	91383443	(90154816)	+	(GCC)n	Simple_repeat	1	58	(0)	3176170
19	17.6	4.2	5.4	chr5	91383444	91383452	(90154807)	+	(GCGCC)n	Simple_repeat	25	74	(0)	3176169
34	7.4	0.0	0.0	chr5	93588793	93588835	(87949424)	+	(GT)n	Simple_repeat	1	43	(0)	3178844
230	22.9	1.4	5.4	chr5	95555504	95555577	(85982682)	C	Charlie9	DNA/hAT-Charlie	(7)	2750	2680	3181311
23	20.5	1.5	3.0	chr5	95620841	95620905	(85917354)	+	(CGC)n	Simple_repeat	1	66	(0)	3181416
8631	9.3	2.3	1.1	chr5	97190550	97192768	(84345491)	C	L1PB1	LINE/L1	(2955)	3907	1297	3183688
6748	13.8	4.4	1.1	chr5	97192758	97193879	(84344380)	C	L1PB1	LINE/L1	(5700)	1163	3	3183688
5794	19.4	4.3	3.5	chr5	97296655	97298008	(84240251)	C	L1MA3	LINE/L1	(5027)	2538	493	3183801
7728	7.0	0.5	0.4	chr5	100774645	100775650	(80762609)	+	LTR13	LTR/ERVK	1	1007	(0)	3188177
353	16.7	9.3	0.0	chr5	103232448	103232525	(78305734)	+	MIR	SINE/MIR	131	216	(46)	3191150
3352	12.4	4.2	9.5	chr5	103366893	103367542	(78170717)	C	LTR18B	LTR/ERVL	(0)	614	1	3191349
11544	16.1	1.5	2.3	chr5	104178499	104180970	(77357289)	+	HUERS-P3-int	LTR/ERV1	22	2457	(6462)	3192393
3680	15.2	3.0	2.0	chr5	106122294	106122943	(75415316)	C	L1PA16	LINE/L1	(9)	6157	5501	3194697
4338	12.6	1.4	2.4	chr5	106535043	106535532	(75002727)	C	L1PA13	LINE/L1	(19)	6144	5656	3195260
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
1537	18.6	9.4	3.1	chr5	111063426	111063775	(70474484)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3200944
1118	21.8	11.5	5.2	chr5	112995800	112996148	(68542111)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	3203687
3546	13.6	3.7	4.6	chr5	113605569	113606218	(67932041)	+	LTR9D	LTR/ERV1	2	645	(0)	3204529
4794	17.6	3.3	2.1	chr5	113606273	113607733	(67930526)	+	HUERS-P3b-int	LTR/ERV1	243	1993	(6926)	3204530
12	20.8	0.0	2.9	chr5	115169937	115169971	(66368288)	+	G-rich	Low_complexity	1	35	(0)	3206387
13	20.3	7.8	0.0	chr5	115170211	115170261	(66367998)	+	G-rich	Low_complexity	1	55	(0)	3206388
20	19.2	3.8	0.0	chr5	115544855	115544935	(65993324)	+	G-rich	Low_complexity	1	84	(0)	3206941
15	7.7	3.2	6.2	chr5	117366280	117366291	(64171968)	+	(AT)n	Simple_repeat	1	11	(0)	3209524
1673	19.5	0.7	0.3	chr5	117366292	117366578	(64171681)	+	AluJb	SINE/Alu	1	288	(24)	3209525
15	7.7	3.2	6.2	chr5	117366579	117366596	(64171663)	+	(AT)n	Simple_repeat	2	20	(0)	3209526
74	15.4	2.6	1.9	chr5	119743932	119744085	(61794174)	+	GA-rich	Low_complexity	1	158	(0)	3212707
13	32.7	2.0	4.9	chr5	119744290	119744389	(61793870)	+	(CTTCC)n	Simple_repeat	1	102	(0)	3212708
1911	12.5	6.1	3.4	chr5	121954077	121954490	(59583769)	C	LTR12E	LTR/ERV1	(896)	426	1	3215338
812	24.0	8.3	2.4	chr5	121954495	121954823	(59583436)	C	L1MD	LINE/L1	(744)	5402	5053	3215339
34	25.1	0.0	0.0	chr5	122852069	122852145	(58686114)	+	(TA)n	Simple_repeat	1	77	(0)	3216540
15	17.7	6.3	4.5	chr5	122852113	122852161	(58686098)	+	(TCTATTT)n	Simple_repeat	1	51	(0)	3216541
662	8.4	0.0	5.0	chr5	122852162	122852261	(58685998)	C	L1PA8	LINE/L1	(2)	6170	6076	3216542
15	17.7	6.3	4.5	chr5	122852262	122852274	(58685985)	+	(TCTATTT)n	Simple_repeat	3	15	(0)	3216543
193	28.1	9.2	8.6	chr5	122852297	122852345	(58685914)	C	L3	LINE/CR1	(130)	3969	3917	3216544
2011	16.8	0.7	0.3	chr5	122852346	122852642	(58685617)	C	AluJb	SINE/Alu	(14)	298	1	3216545
4473	16.2	3.8	3.3	chr5	123067056	123067959	(58470300)	C	L1MB5	LINE/L1	(0)	6174	5263	3216890
24	26.1	3.1	0.0	chr5	123068078	123068141	(58470118)	+	(TG)n	Simple_repeat	1	66	(0)	3216891
238	21.1	10.0	0.0	chr5	123204339	123204428	(58333831)	C	MER121	DNA/hAT?	(160)	241	142	3217052
10911	15.8	4.5	2.5	chr5	123936409	123938127	(57600132)	C	HUERS-P3b-int	LTR/ERV1	(7152)	1767	4	3218011
778	18.8	0.8	0.0	chr5	126539016	126539143	(54999116)	C	FLAM_C	SINE/Alu	(14)	129	1	3221363
20	20.7	1.7	3.3	chr5	128083672	128083730	(53454529)	+	(GCC)n	Simple_repeat	1	60	(0)	3223723
12	22.9	2.3	2.3	chr5	128083748	128083790	(53454469)	+	(GCCC)n	Simple_repeat	1	44	(0)	3223724
33	2.9	0.0	0.0	chr5	128084240	128084274	(53453985)	+	(GCG)n	Simple_repeat	1	35	(0)	3223725
23	13.4	4.1	0.0	chr5	128201176	128201224	(53337035)	+	(TCCT)n	Simple_repeat	1	51	(0)	3223866
1297	28.0	13.1	2.6	chr5	128790536	128791370	(52746889)	C	L1MD1	LINE/L1	(5569)	1064	44	3224574
3822	26.6	10.5	2.0	chr5	131559364	131559541	(49978718)	C	L1M5	LINE/L1	(3604)	2542	2349	3228156
1392	19.4	8.9	0.7	chr5	131559542	131559655	(49978604)	+	AluJr	SINE/Alu	1	117	(195)	3228159
26	6.1	0.0	0.0	chr5	131559656	131559689	(49978570)	+	(ACA)n	Simple_repeat	1	34	(0)	3228160
1392	19.4	8.9	0.7	chr5	131559690	131559852	(49978407)	+	AluJr	SINE/Alu	133	303	(9)	3228159
2760	7.5	4.0	0.6	chr5	133459926	133460289	(48077970)	+	MER51B	LTR/ERV1	1	377	(0)	3230988
2411	5.2	0.0	0.3	chr5	134039323	134039627	(47498632)	C	AluY	SINE/Alu	(6)	305	2	3231812
457	23.8	1.9	8.5	chr5	134039628	134039668	(47498591)	C	MER5B	DNA/hAT-Charlie	(114)	64	25	3231811
15	15.0	6.5	2.0	chr5	134527187	134527232	(47011027)	+	(TCCC)n	Simple_repeat	1	49	(0)	3232771
2331	7.1	0.0	5.5	chr5	134737990	134738315	(46799944)	C	AluSg	SINE/Alu	(2)	308	1	3233228
27	11.1	0.0	0.0	chr5	135028543	135028581	(46509678)	+	(T)n	Simple_repeat	1	39	(0)	3233790
14	17.1	2.4	2.4	chr5	135028626	135028666	(46509593)	+	(GGAGGTG)n	Simple_repeat	1	42	(0)	3233791
21	21.8	1.7	1.6	chr5	135028703	135028762	(46509497)	+	(CCCGCG)n	Simple_repeat	1	61	(0)	3233792
26	24.0	3.1	3.0	chr5	135039610	135039707	(46498552)	+	(GCTCCG)n	Simple_repeat	1	101	(0)	3233804
15	2.8	10.0	4.5	chr5	135039773	135039812	(46498447)	+	(GCTCGCCC)n	Simple_repeat	1	44	(0)	3233805
554	30.5	8.3	1.1	chr5	135246540	135246718	(46291541)	C	MIRb	SINE/MIR	(17)	251	59	3234068
239	31.6	3.3	4.1	chr5	135246730	135246851	(46291408)	+	L2b	LINE/L2	3245	3365	(10)	3234069
778	28.1	4.2	5.0	chr5	135560576	135560815	(45977444)	C	MIRb	SINE/MIR	(30)	238	1	3234473
401	31.4	5.4	4.8	chr5	135891659	135891825	(45646434)	+	MIRb	SINE/MIR	2	169	(99)	3234919
4624	13.2	4.3	0.8	chr5	136797454	136798469	(44739790)	C	L1PA17	LINE/L1	(24)	6142	5099	3236134
193	24.4	0.0	0.0	chr5	137629495	137629539	(43908720)	+	MER5B	DNA/hAT-Charlie	131	175	(3)	3237249
197	32.7	12.9	0.0	chr5	137629553	137629653	(43908606)	+	L2b	LINE/L2	3254	3369	(6)	3237250
14	14.9	0.0	3.1	chr5	138338358	138338389	(43199870)	+	(CCCT)n	Simple_repeat	1	32	(0)	3238687
2145	10.0	2.0	2.0	chr5	138450461	138450632	(43087627)	C	AluSz6	SINE/Alu	(11)	301	134	3238892
5128	9.9	0.7	0.9	chr5	139385611	139386302	(42151957)	+	LTR8	LTR/ERV1	1	691	(0)	3240675
14	11.2	0.0	6.1	chr5	140346522	140346554	(41191705)	+	(GCCC)n	Simple_repeat	1	33	(0)	3242425
13	20.8	0.0	0.0	chr5	140346653	140346685	(41191574)	+	(GCCCC)n	Simple_repeat	1	33	(0)	3242426
2353	8.1	2.6	0.7	chr5	140638550	140638856	(40899403)	C	AluSq2	SINE/Alu	(0)	313	1	3242979
1467	7.3	3.0	0.0	chr5	140638858	140639049	(40899210)	+	MER4B	LTR/ERV1	569	766	(0)	3242976
21	24.2	0.0	8.7	chr5	140639334	140639436	(40898823)	+	(GCCCC)n	Simple_repeat	1	103	(0)	3242980
2676	21.9	10.5	4.1	chr5	142450259	142451409	(39086850)	C	L1MEc	LINE/L1	(4509)	2593	1329	3246024
846	23.8	5.6	1.9	chr5	142451410	142451615	(39086644)	+	MER58A	DNA/hAT-Charlie	3	216	(8)	3246031
2165	11.9	0.3	0.0	chr5	142451617	142451909	(39086350)	+	AluSz	SINE/Alu	1	294	(18)	3246032
397	33.2	13.4	2.6	chr5	142698680	142698911	(38839348)	C	MIRb	SINE/MIR	(1)	261	1	3246504
684	23.3	14.6	4.3	chr5	142699303	142699607	(38838652)	+	Charlie2a	DNA/hAT-Charlie	14	355	(2506)	3246505
261	30.6	0.0	0.0	chr5	143014325	143014396	(38523863)	C	MIRc	SINE/MIR	(5)	263	192	3247053
256	28.9	14.8	0.7	chr5	146049400	146049549	(35488710)	C	MIRc	SINE/MIR	(0)	268	94	3251776
21	11.2	0.0	0.0	chr5	147453968	147453997	(34084262)	+	(T)n	Simple_repeat	1	30	(0)	3254266
1680	13.0	9.9	3.4	chr5	147576585	147576876	(33961383)	C	AluSq	SINE/Alu	(0)	313	1	3254518
211	19.3	10.9	3.4	chr5	147576891	147576949	(33961310)	+	L2c	LINE/L2	3315	3378	(9)	3254519
21	13.5	0.0	0.0	chr5	147576950	147576982	(33961277)	+	(A)n	Simple_repeat	1	33	(0)	3254520
272	30.9	12.7	0.0	chr5	148957315	148957479	(32580780)	+	L2b	LINE/L2	3221	3409	(17)	3256750
15	8.5	7.7	2.4	chr5	148957514	148957552	(32580707)	+	(AATAGAA)n	Simple_repeat	1	42	(0)	3256751
235	30.9	5.1	1.0	chr5	148958019	148958138	(32580121)	C	L2a	LINE/L2	(27)	3399	3221	3256752
16	17.8	2.4	2.4	chr5	149127971	149128011	(32410248)	+	GA-rich	Low_complexity	1	42	(0)	3257054
439	32.6	13.0	4.3	chr5	149268600	149268971	(32269288)	+	L2c	LINE/L2	2957	3365	(22)	3257337
316	31.3	3.8	6.3	chr5	149269110	149269300	(32268959)	+	Tigger16a	DNA/TcMar-Tigger	113	298	(659)	3257338
1687	8.5	5.1	12.9	chr5	149490823	149491140	(32047119)	C	AluSz	SINE/Alu	(20)	292	1	3257870
596	17.7	0.0	9.9	chr5	149656469	149656609	(31881650)	C	FLAM_C	SINE/Alu	(16)	127	1	3258239
269	30.0	8.5	4.1	chr5	149656647	149656792	(31881467)	C	MamGypLTR3	LTR/Gypsy	(133)	761	609	3258240
236	31.4	0.0	3.4	chr5	149657077	149657165	(31881094)	C	MamGypLTR3	LTR/Gypsy	(404)	577	492	3258240
415	27.7	2.1	0.7	chr5	149775496	149775633	(31762626)	C	MER117	DNA/hAT-Charlie	(39)	158	19	3258519
474	27.5	3.0	3.7	chr5	149776180	149776315	(31761944)	+	MIR3	SINE/MIR	4	138	(70)	3258520
20759	11.0	4.1	1.6	chr5	150734107	150738911	(30799348)	+	L1PB1	LINE/L1	3	5001	(1861)	3260611
565	21.4	18.0	0.0	chr5	151463324	151463496	(30074763)	+	MIR	SINE/MIR	5	215	(47)	3261913
17375	14.3	2.4	2.8	chr5	153147967	153153965	(28384294)	+	L1PA16	LINE/L1	891	6869	(0)	3264771
16400	17.4	1.5	0.6	chr5	154640032	154642817	(26895442)	C	HERVK-int	LTR/ERVK	(3983)	3553	743	3267663
4615	14.6	1.9	0.8	chr5	154642910	154643647	(26894612)	C	HERVK-int	LTR/ERVK	(6790)	746	1	3267663
658	29.5	8.4	3.3	chr5	155943896	155944200	(25594059)	C	L3	LINE/CR1	(156)	3943	3622	3270072
2052	12.0	0.0	4.7	chr5	157828807	157829102	(23709157)	+	AluSz	SINE/Alu	1	283	(29)	3273406
29	3.2	0.0	0.0	chr5	157829103	157829134	(23709125)	+	(AAC)n	Simple_repeat	1	32	(0)	3273407
469	30.3	11.8	2.0	chr5	157994368	157994781	(23543478)	C	L2b	LINE/L2	(1)	3425	2918	3273807
267	26.9	9.3	1.4	chr5	159133027	159133199	(22405060)	C	MIR3	SINE/MIR	(6)	202	11	3275605
4089	13.8	2.5	1.5	chr5	159133382	159134096	(22404163)	C	L1PB4	LINE/L1	(6)	6150	5429	3275606
9401	12.9	5.1	4.2	chr5	159679378	159680941	(21857318)	+	THE1C-int	LTR/ERVL-MaLR	1	1579	(1)	3276546
11	24.3	0.0	0.0	chr5	159965326	159965359	(21572900)	+	(CAGGCA)n	Simple_repeat	1	34	(0)	3277080
1245	12.3	21.9	0.0	chr5	159965838	159966073	(21572186)	C	AluSq2	SINE/Alu	(11)	302	1	3277081
769	26.6	4.8	1.0	chr5	168339502	168339702	(13198557)	+	MIRb	SINE/MIR	45	253	(15)	3289821
405	32.5	4.0	9.7	chr5	168992517	168992754	(12545505)	C	Charlie15a	DNA/hAT-Charlie	(0)	224	1	3291071
26	12.9	3.1	4.5	chr5	169850438	169850502	(11687757)	+	(GTGTAT)n	Simple_repeat	1	67	(0)	3292492
2452	7.6	0.7	0.0	chr5	170623211	170623511	(10914748)	C	AluSp	SINE/Alu	(10)	303	1	3293990
975	28.3	7.1	9.2	chr5	170623512	170623580	(10914679)	+	MLT1C	LTR/ERVL-MaLR	416	467	(0)	3293987
13	0.0	0.0	0.0	chr5	170639133	170639149	(10899110)	+	(AAT)n	Simple_repeat	1	17	(0)	3294015
231	32.8	0.0	0.0	chr5	171317108	171317171	(10221088)	+	MIR3	SINE/MIR	78	141	(67)	3295016
519	30.1	3.8	0.6	chr5	172642175	172642351	(8895908)	C	MIRb	SINE/MIR	(40)	228	46	3297899
799	9.1	0.0	7.6	chr5	173293680	173293811	(8244448)	C	AluJb	SINE/Alu	(188)	124	3	3299367
12	18.8	2.6	2.6	chr5	173330004	173330041	(8208218)	+	G-rich	Low_complexity	1	39	(0)	3299415
708	32.8	12.9	4.4	chr5	173592022	173592496	(7945763)	C	MamGypLTR3a	LTR/Gypsy	(3)	978	458	3299887
1473	18.3	7.3	5.8	chr5	173592540	173592904	(7945355)	+	MLT1A	LTR/ERVL-MaLR	4	374	(0)	3299888
1857	15.8	0.0	6.1	chr5	175465027	175465354	(6072905)	C	AluJr	SINE/Alu	(3)	309	2	3303458
480	29.4	3.2	2.7	chr5	175696735	175696919	(5841340)	+	MIR	SINE/MIR	69	254	(8)	3303950
236	35.0	2.5	0.0	chr5	175696945	175697061	(5841198)	+	MIRb	SINE/MIR	29	148	(120)	3303951
445	19.8	3.6	2.8	chr5	175701083	175701191	(5837068)	C	MIRb	SINE/MIR	(62)	206	97	3303959
1065	28.1	5.7	2.8	chr5	175701296	175701811	(5836448)	C	MLT1K	LTR/ERVL-MaLR	(3)	592	16	3303960
1369	20.1	4.1	11.5	chr5	175718460	175718964	(5819295)	+	LTR37B	LTR/ERV1	1	466	(2)	3303991
559	25.2	8.8	11.7	chr5	175719016	175719175	(5819084)	+	ORSL-2a	DNA/hAT-Tip100	1	173	(169)	3303992
255	31.0	5.2	2.8	chr5	176405689	176405848	(5132411)	+	MIRc	SINE/MIR	1	166	(102)	3305186
14	18.7	2.2	4.3	chr5	176416387	176416432	(5121827)	+	(CTCCG)n	Simple_repeat	1	47	(0)	3305205
463	24.2	9.2	3.7	chr5	177390390	177390552	(4147707)	C	MIRb	SINE/MIR	(94)	174	2	3307317
496	21.8	4.3	11.4	chr5	177390884	177391085	(4147174)	C	MIRb	SINE/MIR	(79)	189	3	3307318
195	22.5	19.2	0.0	chr5	177599872	177599951	(3938308)	+	MIR3	SINE/MIR	30	128	(80)	3307714
1890	15.0	0.7	1.4	chr5	178076552	178076844	(3461415)	+	AluJb	SINE/Alu	2	292	(20)	3308490
418	26.8	8.7	0.5	chr5	178577248	178577457	(2960802)	C	MLT1B	LTR/ERVL-MaLR	(161)	229	1	3309430
392	27.6	11.7	3.1	chr5	178730997	178731190	(2807069)	C	L2a	LINE/L2	(2)	3424	3212	3309715
21	13.9	0.0	0.0	chr5	178731291	178731323	(2806936)	+	(TG)n	Simple_repeat	1	33	(0)	3309716
20	17.2	4.2	0.0	chr5	178731324	178731337	(2806922)	+	(ATGT)n	Simple_repeat	2	50	(0)	3309717
15	12.4	1.9	9.3	chr5	179796027	179796079	(1742180)	+	G-rich	Low_complexity	1	54	(0)	3311604
12	24.9	5.8	0.0	chr5	179796340	179796391	(1741868)	+	(CGCGCCG)n	Simple_repeat	1	55	(0)	3311605
1700	17.3	4.1	0.6	chr5	180072515	180072840	(1465419)	C	MER1B	DNA/hAT-Charlie	(1)	338	1	3312027
2436	6.7	1.6	0.0	chr5	180073267	180073565	(1464694)	+	AluSx3	SINE/Alu	1	304	(7)	3312028
47	0.0	0.0	2.1	chr5	180209105	180209151	(1329108)	+	(CGC)n	Simple_repeat	1	47	(0)	3312243
348	29.3	5.2	0.0	chr5	180252995	180253175	(1285084)	+	LTR16B2	LTR/ERVL	1	191	(271)	3312308
664	28.2	12.9	4.6	chr5	180253766	180253963	(1284296)	+	HAL1	LINE/L1	605	810	(1697)	3312309
229	26.7	8.7	2.5	chr5	180291405	180291523	(1246736)	C	MIRb	SINE/MIR	(50)	218	92	3312361
13	14.7	3.3	0.0	chr5	180291871	180291900	(1246359)	+	G-rich	Low_complexity	1	31	(0)	3312362
12	22.5	2.3	2.3	chr5	180291923	180291930	(1246329)	+	(GCTCC)n	Simple_repeat	1	43	(0)	3312363
14	10.7	0.0	5.9	chr5	180291931	180291964	(1246295)	+	(GCCCC)n	Simple_repeat	1	34	(0)	3312364
32	0.0	3.0	0.0	chr5	180291966	180291998	(1246261)	+	(CCG)n	Simple_repeat	1	34	(0)	3312365
244	30.8	10.1	5.2	chr5	180315478	180315705	(1222554)	+	L1MC5a	LINE/L1	2532	2775	(2)	3312407
887	14.3	0.0	0.8	chr5	180470823	180470948	(1067311)	+	AluJr	SINE/Alu	1	125	(187)	3312705
253	29.3	11.6	2.9	chr5	180470949	180471050	(1067209)	C	MER5A	DNA/hAT-Charlie	(0)	189	78	3312706
294	32.4	6.1	0.9	chr5	180471255	180471363	(1066896)	C	MIR1_Amn	SINE/MIR	(51)	179	65	3312707
180	30.8	0.0	3.7	chr5	180471384	180471437	(1066822)	+	MER5B	DNA/hAT-Charlie	1	52	(126)	3312708
11	27.9	1.6	4.8	chr5	180619104	180619165	(919094)	+	(GGCGGCG)n	Simple_repeat	1	63	(0)	3312984
17	26.4	4.6	1.5	chr5	180619152	180619216	(919043)	+	(GC)n	Simple_repeat	1	68	(0)	3312985
1418	17.3	2.6	1.3	chr5	181052210	181052508	(485751)	+	L1MB3	LINE/L1	5881	6183	(0)	3313565
14	15.7	0.0	5.1	chr5	181052900	181052938	(485321)	+	G-rich	Low_complexity	1	39	(0)	3313573
739	22.1	2.4	0.0	chr5	181167669	181167883	(370376)	+	L1MD2	LINE/L1	5296	5480	(762)	3313767
560	23.1	0.9	0.0	chr5	181167886	181167993	(370266)	+	FLAM_A	SINE/Alu	1	109	(33)	3313768
2249	26.6	6.1	1.5	chr5	181168056	181168858	(369401)	+	L1MD2	LINE/L1	5474	6346	(13)	3313767
230	4.5	1.1	4.8	chr6	147636	147986	(170657993)	+	(CTAACC)n	Simple_repeat	1	355	(0)	3314431
2053	19.6	3.8	1.5	chr6	147987	149049	(170656930)	C	TAR1	Satellite/telo	(237)	1087	1	3314432
2022	12.5	3.7	0.0	chr6	2297324	2297659	(168508320)	C	LTR35A	LTR/ERV1	(0)	547	199	3317241
1156	10.2	1.1	0.0	chr6	2297658	2297834	(168508145)	+	THE1C-int	LTR/ERVL-MaLR	1453	1631	(0)	3317242
2074	10.7	0.6	4.2	chr6	2297835	2298195	(168507784)	+	THE1C	LTR/ERVL-MaLR	1	431	(26)	3317242
724	30.6	16.6	2.5	chr6	2482679	2483204	(168322775)	+	MamGypLTR3	LTR/Gypsy	277	891	(3)	3317497
14	19.0	5.0	4.8	chr6	2634350	2634409	(168171570)	+	(CCCGCAG)n	Simple_repeat	1	63	(0)	3317715
307	35.3	5.0	2.1	chr6	3164403	3164691	(167641288)	C	Tigger16a	DNA/TcMar-Tigger	(603)	354	57	3318501
697	18.5	0.7	0.7	chr6	3209274	3209409	(167596570)	+	MER5A1	DNA/hAT-Charlie	27	162	(4)	3318577
280	26.6	15.0	0.0	chr6	3229542	3229654	(167576325)	C	MIR3	SINE/MIR	(35)	173	41	3318609
915	19.9	10.7	0.9	chr6	3411410	3411637	(167394342)	+	L1MB8	LINE/L1	5926	6178	(0)	3318847
23	30.9	0.0	3.0	chr6	3850056	3850155	(166955824)	+	(GGCAGC)n	Simple_repeat	1	100	(0)	3319533
188	28.9	4.0	11.0	chr6	4280357	4280465	(166525514)	+	MIRc	SINE/MIR	38	138	(130)	3320223
306	32.5	7.3	4.0	chr6	4280478	4280650	(166525329)	C	LTR104_Mam	LTR/Gypsy	(0)	1509	1331	3320224
7435	18.6	3.3	1.5	chr6	4311839	4313778	(166492201)	C	L1M3f	LINE/L1	(4364)	3201	1240	3320273
12	14.1	7.3	2.3	chr6	7051687	7051727	(163754252)	+	(GGTGCGG)n	Simple_repeat	1	44	(0)	3324482
171	18.6	8.5	0.7	chr6	8936964	8937363	(161868616)	+	(AT)n	Simple_repeat	1	438	(0)	3327416
2858	9.4	0.2	0.2	chr6	8937364	8937767	(161868212)	C	L1PA11	LINE/L1	(1)	6173	5770	3327417
5208	14.5	11.8	13.8	chr6	10719155	10720418	(160085561)	C	LTR12D	LTR/ERV1	(0)	1254	19	3330061
9330	12.9	5.7	5.0	chr6	10720419	10722100	(160083879)	+	LTR12C	LTR/ERV1	2	1567	(12)	3330062
18	24.2	7.3	0.0	chr6	11044334	11044417	(159761562)	+	(CG)n	Simple_repeat	1	90	(0)	3330624
2304	9.8	0.3	1.0	chr6	11045133	11045437	(159760542)	+	AluJb	SINE/Alu	4	306	(6)	3330625
440	31.3	1.0	1.7	chr6	12504382	12504564	(158301415)	C	MIRb	SINE/MIR	(87)	181	5	3332793
8303	9.5	17.2	0.1	chr6	13772315	13773622	(157032357)	+	LTR12C	LTR/ERV1	3	1579	(0)	3334877
29	17.4	0.0	0.0	chr6	13795124	13795175	(157010804)	+	A-rich	Low_complexity	1	52	(0)	3334927
1340	20.2	7.8	2.6	chr6	16216274	16216624	(154589355)	+	LTR8B	LTR/ERV1	436	806	(14)	3339175
6454	18.2	6.0	1.0	chr6	16216653	16217476	(154588503)	+	LTR12E	LTR/ERV1	1	831	(491)	3339176
6107	16.7	16.2	1.1	chr6	17728591	17729824	(153076155)	+	LTR12C	LTR/ERV1	3	1458	(121)	3341693
454	25.2	12.8	7.6	chr6	18823919	18824154	(151981825)	+	MamGypLTR3a	LTR/Gypsy	627	876	(105)	3343634
197	24.7	2.7	6.4	chr6	19805253	19805330	(151000649)	C	L2b	LINE/L2	(19)	3356	3282	3344952
7308	9.5	20.5	3.1	chr6	20032174	20033467	(150772512)	+	LTR12C	LTR/ERV1	3	1579	(0)	3345293
20	33.9	0.0	0.0	chr6	22146461	22146530	(148659449)	+	(TT)n	Simple_repeat	1	70	(0)	3348904
28	12.6	0.0	0.0	chr6	22146559	22146601	(148659378)	+	(T)n	Simple_repeat	1	43	(0)	3348905
574	25.3	2.5	0.0	chr6	24348393	24348550	(146457429)	C	LTR65	LTR/ERV1	(505)	164	3	3351746
15	29.0	0.0	3.2	chr6	24495062	24495130	(146310849)	+	(CCGCCC)n	Simple_repeat	1	66	(0)	3352039
2022	11.5	0.3	0.7	chr6	26214857	26215143	(144590836)	C	AluSq2	SINE/Alu	(27)	286	1	3354839
4810	13.4	10.5	4.0	chr6	26956056	26957143	(143848836)	C	LTR12E	LTR/ERV1	(155)	1167	1	3356080
556	23.8	7.4	1.0	chr6	27252055	27252249	(143553730)	+	MIRb	SINE/MIR	26	243	(25)	3356581
237	25.4	0.0	0.0	chr6	27252310	27252368	(143553611)	+	L2a	LINE/L2	3367	3425	(1)	3356578
2686	5.0	0.3	3.1	chr6	28676178	28676494	(142129485)	+	AluY	SINE/Alu	1	308	(3)	3359021
1630	18.1	7.5	1.7	chr6	28676764	28676887	(142129092)	+	AluJb	SINE/Alu	1	121	(191)	3359022
473	31.1	11.7	7.4	chr6	29016881	29017519	(141788460)	+	MamGypLTR3	LTR/Gypsy	208	877	(17)	3359639
6492	11.4	2.0	1.3	chr6	30411305	30412251	(140393728)	+	LTR13_	LTR/ERVK	1	954	(0)	3361566
428	15.3	0.0	5.6	chr6	30759824	30759913	(140046066)	C	AluJb	SINE/Alu	(8)	304	220	3362167
1427	19.5	1.6	0.0	chr6	30760171	30760416	(140045563)	C	AluJb	SINE/Alu	(62)	250	1	3362167
799	30.7	4.3	1.0	chr6	31070641	31070933	(139735046)	+	LTR78	LTR/ERV1	360	662	(642)	3362745
44	0.0	2.2	2.1	chr6	31442429	31442474	(139363505)	+	(GT)n	Simple_repeat	1	47	(0)	3363327
11	21.1	8.2	0.0	chr6	31529767	31529815	(139276164)	+	(AGCTGG)n	Simple_repeat	1	53	(0)	3363457
2253	6.7	0.3	1.4	chr6	31772560	31772898	(139033081)	C	AluSp	SINE/Alu	(0)	313	1	3363866
15	20.3	2.1	2.1	chr6	31952451	31952497	(138853482)	+	(CCCTGAC)n	Simple_repeat	1	48	(0)	3364237
11	13.2	5.7	2.7	chr6	32953461	32953495	(137852484)	+	(CCTCCTT)n	Simple_repeat	1	37	(0)	3365656
240	30.4	12.5	5.2	chr6	32953532	32953872	(137852107)	C	L2c	LINE/L2	(4)	3422	3029	3365657
6917	20.4	2.5	2.4	chr6	33122935	33123947	(137682032)	C	HUERS-P3-int	LTR/ERV1	(5651)	1767	750	3365864
1492	17.9	0.7	6.6	chr6	33123957	33124261	(137681718)	C	HUERS-P3-int	LTR/ERV1	(6876)	542	256	3365864
1435	25.0	6.8	2.3	chr6	35552350	35552841	(135253138)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	1	3370638
523	30.7	2.2	1.6	chr6	35552842	35552958	(135253021)	C	L1M7	LINE/L1	(5787)	431	312	3370625
2175	11.1	0.3	0.0	chr6	35552959	35553264	(135252715)	C	AluSp	SINE/Alu	(6)	307	1	3370639
190	17.9	0.0	0.0	chr6	36850923	36850961	(133955018)	+	L2a	LINE/L2	3388	3426	(0)	3373431
187	35.2	4.1	0.0	chr6	36851402	36851472	(133954507)	C	MIR3	SINE/MIR	(50)	158	85	3373438
2338	9.2	0.7	0.0	chr6	37326100	37326394	(133479585)	+	AluSc5	SINE/Alu	1	297	(12)	3374488
316	32.8	8.9	5.7	chr6	37381426	37381706	(133424273)	C	Tigger16a	DNA/TcMar-Tigger	(551)	406	116	3374582
474	30.0	15.9	4.0	chr6	37382081	37382406	(133423573)	C	L2c	LINE/L2	(6)	3381	3010	3374583
279	24.3	7.5	0.0	chr6	38198138	38198248	(132607731)	C	Tigger16a	DNA/TcMar-Tigger	(566)	391	272	3376026
12	25.3	2.4	0.0	chr6	39229797	39229838	(131576141)	+	(TTTATT)n	Simple_repeat	1	43	(0)	3377684
999	14.9	9.6	0.0	chr6	39843543	39843703	(130962276)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	3378644
472	30.4	9.6	3.3	chr6	39843933	39844146	(130961833)	+	MIRb	SINE/MIR	17	245	(23)	3378645
405	32.0	0.0	0.8	chr6	40912388	40912513	(129893466)	C	LTR67B	LTR/ERVL	(117)	503	379	3380289
378	30.4	9.4	1.5	chr6	40912604	40912740	(129893239)	C	LTR67B	LTR/ERVL	(446)	174	26	3380289
2293	10.7	0.0	0.0	chr6	40912851	40913149	(129892830)	+	AluSc8	SINE/Alu	1	299	(12)	3380290
326	34.4	1.8	3.5	chr6	40999809	40999977	(129806002)	+	LTR78B	LTR/ERV1	3	168	(1128)	3380450
16	21.8	4.3	4.2	chr6	41406921	41406989	(129398990)	+	(GGCGC)n	Simple_repeat	1	72	(0)	3381087
27	17.9	3.2	6.2	chr6	41504979	41505071	(129300908)	+	(TCC)n	Simple_repeat	1	96	(0)	3381288
635	16.7	7.7	2.7	chr6	41603368	41603515	(129202464)	C	MIR	SINE/MIR	(0)	262	107	3381454
25	19.8	1.5	1.5	chr6	42263487	42263551	(128542428)	+	(GGAGGC)n	Simple_repeat	1	66	(0)	3382892
727	24.3	7.4	12.7	chr6	42553724	42554053	(128251926)	+	LTR83	LTR/ERVL	149	459	(321)	3383508
5142	10.3	21.0	0.8	chr6	42554056	42554955	(128251024)	+	LTR12D	LTR/ERV1	1	1131	(123)	3383509
8258	19.8	3.6	4.2	chr6	43397454	43398399	(127407580)	+	HERVP71A-int	LTR/ERV1	5211	6165	(1425)	3385269
2343	6.6	1.0	1.7	chr6	43398400	43398700	(127407279)	C	AluY	SINE/Alu	(12)	299	1	3385271
476	27.3	6.4	3.0	chr6	44387161	44387326	(126418653)	C	MIRb	SINE/MIR	(0)	268	97	3387104
34	19.1	5.3	3.3	chr6	45422015	45422128	(125383851)	+	(GCG)n	Simple_repeat	1	120	(0)	3388617
15	14.5	3.9	5.7	chr6	46688505	46688555	(124117424)	+	G-rich	Low_complexity	1	53	(0)	3390568
17332	16.0	3.1	1.0	chr6	50030281	50036334	(120769645)	+	L1PA16	LINE/L1	311	6494	(9)	3395194
1549	22.7	2.1	1.6	chr6	52652112	52652517	(118153462)	+	L1MD2	LINE/L1	757	1163	(5384)	3398884
3330	13.7	4.5	1.2	chr6	70627385	70628249	(100177730)	C	LTR12D	LTR/ERV1	(131)	557	1	3419511
1037	15.5	4.4	0.0	chr6	70628250	70628414	(100177565)	+	THE1D	LTR/ERVL-MaLR	209	381	(0)	3419509
17	18.6	0.0	0.0	chr6	70956192	70956228	(99849751)	+	(GCGGCT)n	Simple_repeat	1	37	(0)	3419938
16	19.1	6.2	2.9	chr6	71289104	71289167	(99516812)	+	(AGGCGCCG)n	Simple_repeat	1	68	(0)	3420396
527	9.7	24.9	8.2	chr6	79869459	79869616	(90936363)	+	MER53	DNA/hAT	1	193	(0)	3431885
9271	13.5	4.7	4.1	chr6	81421948	81423517	(89382462)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3433758
38	2.8	0.0	0.0	chr6	82993122	82993158	(87812821)	+	(GA)n	Simple_repeat	1	37	(0)	3435903
1782	18.4	1.5	0.9	chr6	82993379	82993712	(87812267)	C	MER2B	DNA/TcMar-Tigger	(0)	336	1	3435904
9246	10.2	4.4	14.4	chr6	83031309	83032657	(87773322)	+	THE1B-int	LTR/ERVL-MaLR	362	1580	(0)	3435958
582	25.7	2.2	0.0	chr6	83065327	83065462	(87740517)	C	MER5A1	DNA/hAT-Charlie	(0)	166	28	3436011
16	7.8	0.0	3.5	chr6	84033787	84033815	(86772164)	+	(GGC)n	Simple_repeat	1	29	(0)	3437334
12	12.2	3.7	0.0	chr6	84774005	84774031	(86031948)	+	(TGCG)n	Simple_repeat	1	28	(0)	3438237
2863	6.2	0.3	2.2	chr6	85707557	85707918	(85098061)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3439481
692	13.9	0.8	6.9	chr6	85707919	85708020	(85097959)	+	MLT1A1	LTR/ERVL-MaLR	28	123	(285)	3439480
237	28.7	8.7	2.1	chr6	90287060	90287155	(80518824)	C	Tigger16a	DNA/TcMar-Tigger	(777)	180	78	3446156
9229	11.2	2.9	9.0	chr6	92723325	92725006	(78080973)	+	LTR12C	LTR/ERV1	3	1579	(0)	3449232
2044	15.4	2.4	0.3	chr6	92879329	92879908	(77926071)	+	L1PA8A	LINE/L1	1	624	(5251)	3449420
4355	8.1	0.7	2.1	chr6	92879884	92880602	(77925377)	C	L1P3	LINE/L1	(2203)	3943	3116	3449421
9672	10.6	7.3	0.4	chr6	95669868	95671335	(75134644)	+	LTR12C	LTR/ERV1	3	1579	(0)	3452754
15	10.7	3.3	0.0	chr6	98040430	98040459	(72765520)	+	(TTGTTT)n	Simple_repeat	1	31	(0)	3455792
473	32.2	12.7	0.9	chr6	99089144	99089463	(71716516)	C	MLT1J2	LTR/ERVL-MaLR	(16)	432	70	3457094
211	27.1	0.0	0.0	chr6	99588505	99588552	(71217427)	+	L2a	LINE/L2	3377	3424	(2)	3457915
247	24.2	1.6	1.6	chr6	99588556	99588618	(71217361)	C	L2a	LINE/L2	(16)	3410	3348	3457916
8853	7.1	16.1	0.2	chr6	102909878	102911203	(67894776)	C	LTR12C	LTR/ERV1	(1)	1578	3	3462110
11	10.6	0.0	10.5	chr6	104941037	104941074	(65864905)	+	G-rich	Low_complexity	1	38	(0)	3464694
25	21.4	9.3	2.1	chr6	105402895	105403023	(65402956)	+	G-rich	Low_complexity	1	141	(0)	3465369
14	14.6	0.0	3.1	chr6	105403119	105403171	(65402808)	+	(CGG)n	Simple_repeat	1	51	(0)	3465370
3543	11.8	2.4	3.3	chr6	106820494	106821045	(63984934)	+	LTR35A	LTR/ERV1	1	547	(0)	3467553
245	16.2	0.0	0.0	chr6	110511466	110511502	(60294477)	+	LTR35	LTR/ERV1	1	37	(571)	3473768
1568	12.8	7.7	0.6	chr6	110511501	110511864	(60294115)	+	LTR35	LTR/ERV1	158	547	(0)	3473768
319	18.5	0.0	0.0	chr6	110511871	110511924	(60294055)	+	MER21C	LTR/ERVL	803	856	(82)	3473766
829	18.9	1.9	0.6	chr6	110512032	110512191	(60293788)	+	MLT1B	LTR/ERVL-MaLR	1	162	(212)	3473769
380	26.2	0.0	5.3	chr6	112163284	112163416	(58642563)	+	MER58C	DNA/hAT-Charlie	60	185	(30)	3476711
1463	30.4	17.0	11.2	chr6	112163417	112164619	(58641360)	C	L2a	LINE/L2	(1208)	2202	698	3476708
5741	22.9	8.7	6.7	chr6	117280686	117281531	(53524448)	C	ERV3-16A3_I-int	LTR/ERVL	(2860)	2366	1571	3483684
38427	12.9	2.3	0.9	chr6	118580330	118588950	(52217029)	+	HUERS-P3-int	LTR/ERV1	1	8907	(12)	3485361
44990	10.6	0.9	0.5	chr6	118617801	118624278	(52181701)	+	HERV30-int	LTR/ERV1	3	6502	(1755)	3485403
1979	22.1	3.4	1.8	chr6	118686204	118686718	(52119261)	C	L1ME1	LINE/L1	(0)	6179	5656	3485513
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
15314	12.9	1.6	0.7	chr6	125151313	125153651	(45652328)	+	Tigger1	DNA/TcMar-Tigger	55	2416	(2)	3493929
1700	17.9	5.2	0.3	chr6	125858359	125858648	(44947331)	+	AluJr	SINE/Alu	1	305	(7)	3494931
15	10.1	2.9	2.9	chr6	127266776	127266809	(43539170)	+	G-rich	Low_complexity	1	35	(0)	3496650
17	20.8	6.5	0.0	chr6	128471992	128472037	(42333942)	+	GA-rich	Low_complexity	1	49	(0)	3498199
802	24.8	0.9	5.5	chr6	128472455	128472795	(42333184)	C	L1MC4	LINE/L1	(0)	8042	7735	3498200
476	29.2	9.0	5.9	chr6	131923394	131923768	(38882211)	C	MamGypLTR3a	LTR/Gypsy	(100)	881	494	3503110
186	30.8	4.4	4.4	chr6	131923949	131924016	(38881963)	C	MIR3	SINE/MIR	(83)	125	58	3503111
2439	12.3	1.8	3.4	chr6	132259357	132259743	(38546236)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3503603
318	16.4	15.1	0.0	chr6	134097395	134097467	(36708512)	C	LTR82B	LTR/ERVL	(261)	569	484	3506168
2502	22.9	4.1	3.8	chr6	134107041	134107653	(36698326)	C	MLT1E3	LTR/ERVL-MaLR	(3)	621	7	3506185
30	34.8	0.0	0.0	chr6	139373348	139373463	(31432516)	+	(GCC)n	Simple_repeat	1	116	(0)	3514554
17	7.0	0.0	5.9	chr6	142146996	142147029	(28658950)	+	(AACAA)n	Simple_repeat	1	34	(0)	3518107
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
392	28.7	9.8	6.0	chr6	143427582	143427766	(27378213)	+	L2a	LINE/L2	3158	3350	(76)	3519860
977	17.1	7.0	0.0	chr6	147213261	147213418	(23592561)	C	AluJb	SINE/Alu	(7)	305	136	3525104
51	0.0	0.0	0.0	chr6	147213435	147213478	(23592501)	+	(TG)n	Simple_repeat	1	44	(0)	3525105
339	18.5	8.4	0.0	chr6	147213513	147213577	(23592402)	C	FLAM_A	SINE/Alu	(10)	132	62	3525106
18	23.2	0.0	3.7	chr6	147509159	147509212	(23296767)	+	(GCC)n	Simple_repeat	1	54	(0)	3525503
278	31.9	4.2	0.0	chr6	149026649	149026739	(21779240)	+	Tigger16a	DNA/TcMar-Tigger	122	216	(741)	3527815
422	32.7	4.3	1.5	chr6	149026797	149027001	(21778978)	+	Tigger16a	DNA/TcMar-Tigger	738	948	(9)	3527816
2493	5.5	0.3	5.8	chr6	149306259	149306587	(21499392)	+	AluY	SINE/Alu	1	311	(0)	3528224
2128	11.2	0.0	5.8	chr6	149306588	149306762	(21499217)	+	AluSz	SINE/Alu	136	293	(19)	3528223
194	29.8	0.0	3.4	chr6	149306830	149306888	(21499091)	C	L2c	LINE/L2	(323)	3064	3008	3528220
227	23.9	0.0	0.0	chr6	149898723	149898768	(20907211)	C	LTR85a	LTR/Gypsy?	(294)	408	363	3529374
5852	13.4	2.4	1.1	chr6	149916791	149917731	(20888248)	C	LTR13_	LTR/ERVK	(0)	954	1	3529394
22515	11.6	5.1	0.3	chr6	151642718	151649216	(19156763)	C	L1PB1	LINE/L1	(0)	6867	10	3532394
436	33.3	7.6	5.1	chr6	152553013	152553268	(18252711)	C	MIRb	SINE/MIR	(0)	268	6	3533682
869	33.6	10.1	5.3	chr6	153133119	153133440	(17672539)	+	L2a	LINE/L2	2421	2782	(637)	3534485
10502	6.0	12.6	0.1	chr6	153133441	153134820	(17671159)	+	LTR12C	LTR/ERV1	3	1579	(0)	3534487
9975	11.2	4.4	0.4	chr6	153144296	153146278	(17659701)	C	L1PBa	LINE/L1	(4018)	2845	636	3534507
236	24.7	19.0	1.2	chr6	157435120	157435201	(13370778)	C	MIRb	SINE/MIR	(57)	211	112	3540903
304	34.3	10.6	2.3	chr6	157671221	157671378	(13134601)	+	MIR	SINE/MIR	6	181	(27)	3541270
234	23.6	3.3	8.2	chr6	157874176	157874272	(12931707)	C	Charlie4z	DNA/hAT-Charlie	(20)	147	56	3541622
2287	10.2	0.7	0.0	chr6	158220515	158220809	(12585170)	+	AluSx	SINE/Alu	1	297	(15)	3542162
21	13.4	0.0	0.0	chr6	158221155	158221187	(12584792)	+	(A)n	Simple_repeat	1	33	(0)	3542163
22	15.8	4.0	0.0	chr6	158221188	158221203	(12584776)	+	A-rich	Low_complexity	2	52	(0)	3542164
54	0.0	0.0	0.0	chr6	160347789	160347837	(10458142)	+	(GCCCT)n	Simple_repeat	1	49	(0)	3545346
33	25.2	1.9	6.2	chr6	160348258	160348415	(10457564)	+	(GGCGGCG)n	Simple_repeat	1	161	(0)	3545347
15	17.5	2.0	5.8	chr6	160348644	160348694	(10457285)	+	(GCCCGCG)n	Simple_repeat	1	52	(0)	3545348
31	5.9	0.0	0.0	chr6	162716773	162716808	(8089171)	+	(CA)n	Simple_repeat	1	36	(0)	3548566
1352	19.6	13.1	6.4	chr6	162716968	162717294	(8088685)	+	MLT1D	LTR/ERVL-MaLR	40	400	(105)	3548567
710	10.3	1.7	4.9	chr6	165049125	165049247	(5756732)	+	LTR9	LTR/ERV1	1	119	(493)	3551497
11388	16.4	3.5	2.3	chr6	165049248	165051468	(5754511)	+	HUERS-P3b-int	LTR/ERV1	403	2652	(4766)	3551498
2585	8.1	0.0	0.0	chr6	166097570	166097878	(4708101)	C	AluSg7	SINE/Alu	(0)	309	1	3552789
1901	13.7	0.0	7.2	chr6	166252936	166253270	(4552709)	+	AluJb	SINE/Alu	2	312	(0)	3553001
3757	9.1	0.8	0.2	chr6	166440388	166440896	(4365083)	C	MER75	DNA/PiggyBac	(2)	512	1	3553275
15	12.2	6.2	3.9	chr6	166862557	166862604	(3943375)	+	(TCCTCCC)n	Simple_repeat	1	51	(0)	3553712
14	8.8	7.9	2.4	chr6	166862823	166862860	(3943119)	+	G-rich	Low_complexity	1	41	(0)	3553713
12	19.7	0.0	0.0	chr6	166863061	166863089	(3942890)	+	(GCCCT)n	Simple_repeat	1	29	(0)	3553714
2605	14.9	7.6	1.9	chr6	166877456	166878072	(3927907)	C	MER4B	LTR/ERV1	(0)	900	1	3553735
305	26.2	5.4	1.4	chr6	166904197	166904339	(3901640)	C	MER5A1	DNA/hAT-Charlie	(4)	162	14	3553754
6707	10.5	3.8	1.5	chr6	166950876	166951859	(3854120)	C	LTR13	LTR/ERVK	(0)	1007	1	3553804
739	27.7	6.7	3.3	chr6	167432212	167432513	(3373466)	C	L1ME3A	LINE/L1	(75)	6098	5786	3554400
18	16.3	2.4	0.0	chr6	168215093	168215133	(2590846)	+	(CCTCTC)n	Simple_repeat	1	42	(0)	3555270
388	35.6	4.6	3.7	chr6	168614431	168615747	(2190232)	+	TAR1	Satellite/telo	1	1328	(552)	3555632
59	36.6	0.5	0.5	chr6	168895453	168895665	(1910314)	+	(TG)n	Simple_repeat	1	214	(0)	3555923
1202	24.7	7.4	5.0	chr6	169498639	169499034	(1306945)	+	L1MD2	LINE/L1	5805	6210	(149)	3556511
306	31.5	8.9	5.3	chr6	169499453	169499754	(1306225)	+	ERVL-E-int	LTR/ERVL	1100	1413	(4254)	3556512
16	22.0	6.2	1.4	chr6	170093177	170093241	(712738)	+	(GCTTT)n	Simple_repeat	1	69	(0)	3557134
1065	26.8	11.5	2.7	chr6	170280853	170281439	(524540)	C	L1MC5	LINE/L1	(11)	9293	8649	3557289
2028	17.7	5.0	6.2	chr6	170516358	170516993	(288986)	+	L1MDa	LINE/L1	2057	2676	(3861)	3557521
21494	10.9	2.3	0.7	chr6	170516990	170522022	(283957)	+	L1PA15-16	LINE/L1	1276	6392	(477)	3557525
17	23.4	5.3	2.5	chr6	170529666	170529697	(276282)	+	(TCC)n	Simple_repeat	2	35	(0)	3557544
333	27.9	2.8	6.8	chr7	102759	102955	(159243018)	+	L1MB7	LINE/L1	2498	2682	(3464)	3557959
17	0.0	4.2	0.0	chr7	291162	291185	(159054788)	+	(CGG)n	Simple_repeat	1	25	(0)	3558155
13	23.8	3.9	4.4	chr7	332515	332580	(159013393)	+	G-rich	Low_complexity	1	65	(0)	3558212
12	26.4	2.2	0.0	chr7	332851	332895	(159013078)	+	(CGCCCG)n	Simple_repeat	1	46	(0)	3558213
12	21.1	2.5	2.4	chr7	452354	452393	(158893580)	+	G-rich	Low_complexity	1	41	(0)	3558365
282	36.4	4.7	2.7	chr7	452577	452723	(158893250)	+	MIRb	SINE/MIR	49	198	(70)	3558366
13	11.1	3.2	3.1	chr7	712293	712323	(158633650)	+	(GCCCC)n	Simple_repeat	1	32	(0)	3558779
18	16.6	2.0	3.9	chr7	712420	712470	(158633503)	+	G-rich	Low_complexity	1	52	(0)	3558780
14	16.1	2.1	6.2	chr7	741270	741316	(158604657)	+	(CCCTG)n	Simple_repeat	1	48	(0)	3558817
16	14.5	9.2	4.8	chr7	1640786	1640867	(157705106)	+	(CAGCCCCAG)n	Simple_repeat	1	85	(0)	3560231
142	31.1	2.9	6.0	chr7	2577190	2578194	(156767779)	+	(GTGC)n	Simple_repeat	1	973	(0)	3561666
1720	18.5	2.0	2.3	chr7	2751106	2751413	(156594560)	+	AluJb	SINE/Alu	1	307	(5)	3561936
2523	27.8	8.7	4.3	chr7	2751414	2752721	(156593252)	+	L1MEf	LINE/L1	3030	4409	(1737)	3561932
425	33.1	4.8	0.8	chr7	2815950	2816210	(156529763)	+	L1ME3Cz	LINE/L1	312	598	(2179)	3562049
30	0.0	3.1	0.0	chr7	3301144	3301175	(156044798)	+	(CGGCGGG)n	Simple_repeat	1	33	(0)	3563107
18	27.8	2.1	5.2	chr7	3301201	3301295	(156044678)	+	(GCG)n	Simple_repeat	1	97	(0)	3563108
58	22.1	5.3	0.6	chr7	4797986	4798154	(154547819)	+	(TA)n	Simple_repeat	1	178	(0)	3565566
2026	11.2	0.0	0.0	chr7	5084978	5085271	(154260702)	C	AluSc	SINE/Alu	(0)	309	13	3566195
2505	4.7	0.7	0.0	chr7	5085749	5086044	(154259929)	+	AluY	SINE/Alu	1	298	(13)	3566196
2307	6.3	1.7	0.3	chr7	5563836	5564122	(153781851)	C	AluSp	SINE/Alu	(21)	292	2	3567346
1127	19.1	3.2	0.0	chr7	7653757	7653965	(151692008)	+	MER20	DNA/hAT-Charlie	4	219	(0)	3571388
6028	11.4	7.1	15.9	chr7	15396180	15397560	(143948413)	C	LTR12D	LTR/ERV1	(3)	1251	1	3581205
23	23.8	3.3	3.2	chr7	15397561	15397643	(143948330)	+	(CCTT)n	Simple_repeat	1	83	(0)	3581206
193	30.9	0.0	3.5	chr7	16099016	16099072	(143246901)	+	L2b	LINE/L2	3306	3360	(15)	3582091
14	14.1	7.7	0.0	chr7	16421279	16421317	(142924656)	+	(CCCGG)n	Simple_repeat	1	42	(0)	3582435
401	31.5	11.2	5.0	chr7	20648336	20648759	(138697214)	+	Tigger16a	DNA/TcMar-Tigger	126	579	(378)	3588043
29	3.2	0.0	0.0	chr7	20785322	20785353	(138560620)	+	(GCC)n	Simple_repeat	1	32	(0)	3588258
13	16.3	2.8	2.7	chr7	22083380	22083415	(137262558)	+	(CGCCC)n	Simple_repeat	1	37	(0)	3590177
20	11.8	0.0	2.6	chr7	23546891	23546929	(135799044)	+	(TTGTTT)n	Simple_repeat	1	39	(0)	3592574
270	18.0	0.0	0.0	chr7	23546933	23546982	(135798991)	C	MER66B	LTR/ERV1	(142)	344	295	3592575
6803	20.7	9.3	6.3	chr7	23937649	23939149	(135406824)	C	L1MA5A	LINE/L1	(3925)	3640	2088	3593172
2611	17.5	5.5	0.0	chr7	23939162	23939606	(135406367)	C	L1MA5A	LINE/L1	(6316)	1250	780	3593172
1995	13.9	0.0	2.1	chr7	23939634	23939921	(135406052)	+	AluJb	SINE/Alu	2	283	(29)	3593176
560	27.0	12.1	1.7	chr7	26079162	26079398	(133266575)	+	MIRb	SINE/MIR	4	268	(0)	3596376
8793	6.3	1.4	0.2	chr7	26817640	26819582	(132526391)	+	L1PA7	LINE/L1	4190	6154	(0)	3597592
13	20.9	1.8	6.9	chr7	27192597	27192653	(132153320)	+	G-rich	Low_complexity	1	58	(0)	3598099
16	10.0	0.0	0.0	chr7	27921336	27921357	(131424616)	+	(T)n	Simple_repeat	1	22	(0)	3599241
1595	18.4	3.9	6.7	chr7	28423903	28424303	(130921670)	C	MLT1B	LTR/ERVL-MaLR	(1)	389	1	3600045
2408	9.4	0.7	0.0	chr7	30445477	30445783	(128900190)	+	AluSx1	SINE/Alu	1	309	(3)	3603135
2048	17.1	2.7	2.7	chr7	30445784	30446012	(128899961)	+	L1MB2	LINE/L1	5832	6059	(112)	3603132
743	22.0	0.0	0.0	chr7	33895124	33895255	(125450718)	+	AluJr	SINE/Alu	135	266	(46)	3608559
475	26.5	6.8	0.0	chr7	35520029	35520164	(123825809)	+	MER103C	DNA/hAT-Charlie	87	232	(65)	3610782
13	13.6	2.9	2.9	chr7	38107251	38107284	(121238689)	+	(GGAGTT)n	Simple_repeat	1	35	(0)	3614656
229	3.7	0.0	0.0	chr7	38107600	38107626	(121238347)	C	MamGypLTR3a	LTR/Gypsy	(251)	730	704	3614657
1717	16.8	2.1	0.7	chr7	38660385	38660670	(120685303)	C	AluJr	SINE/Alu	(22)	290	1	3615458
18794	12.2	1.9	1.4	chr7	38660671	38664277	(120681696)	+	L1PA16	LINE/L1	1470	5115	(1734)	3615457
13	14.7	3.3	0.0	chr7	42493276	42493320	(116852653)	+	(ATAA)n	Simple_repeat	1	46	(0)	3621321
12	29.2	0.0	3.7	chr7	42911707	42911760	(116434213)	+	(CGGCC)n	Simple_repeat	1	54	(0)	3621832
254	21.7	1.7	3.3	chr7	44131319	44131388	(115214585)	+	MIR	SINE/MIR	51	126	(142)	3623849
281	31.4	12.0	2.8	chr7	44131400	44131648	(115214325)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	238	3623850
2249	10.2	0.0	0.3	chr7	45663547	45663841	(113682132)	+	AluSg	SINE/Alu	10	303	(7)	3626207
302	25.7	11.4	1.0	chr7	50369572	50369673	(108976300)	+	Tigger16a	DNA/TcMar-Tigger	102	215	(742)	3632292
2357	18.6	2.0	2.6	chr7	50412468	50412841	(108933132)	+	L1MCa	LINE/L1	2423	2790	(3531)	3632327
363	29.5	13.4	5.4	chr7	50588618	50588857	(108757116)	C	L1M7	LINE/L1	(5949)	269	8	3632568
14179	20.9	4.9	2.9	chr7	50632306	50635941	(108710032)	+	L1PB4	LINE/L1	610	4311	(2604)	3632606
694	7.1	0.0	0.0	chr7	51160910	51160993	(108184980)	C	AluSx3	SINE/Alu	(18)	293	210	3633275
2118	13.4	0.0	0.7	chr7	56004568	56004872	(103341101)	+	AluSx1	SINE/Alu	1	303	(9)	3639688
2093	18.0	0.5	6.0	chr7	56004873	56005114	(103340859)	C	MER54A	LTR/ERVL	(593)	308	89	3639687
2261	9.5	0.3	1.0	chr7	56005115	56005409	(103340564)	+	AluSx	SINE/Alu	1	293	(19)	3639689
347	18.2	0.0	0.0	chr7	57495188	57495242	(101850731)	+	AluYj4	SINE/Alu	225	279	(32)	3642545
367	17.7	3.1	0.0	chr7	57495408	57495469	(101850504)	+	AluYj4	SINE/Alu	226	289	(22)	3642546
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
8351	5.5	0.4	0.1	chr7	65446606	65447609	(93898364)	C	LTR13	LTR/ERVK	(0)	1007	1	3647850
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
425	28.2	11.7	1.5	chr7	67625221	67625630	(91720343)	C	MamGypLTR3	LTR/Gypsy	(92)	889	340	3652646
14	19.1	8.7	2.7	chr7	73434512	73434580	(85911393)	+	(GGCCCGC)n	Simple_repeat	1	75	(0)	3664625
2135	11.7	0.3	0.3	chr7	73725419	73725716	(85620257)	+	AluSx1	SINE/Alu	13	310	(2)	3665310
66	0.0	0.0	1.6	chr7	73725721	73725783	(85620190)	+	(CAAG)n	Simple_repeat	1	63	(0)	3665311
2332	8.2	0.0	1.6	chr7	74275080	74275383	(85070590)	C	AluSx3	SINE/Alu	(12)	299	1	3666649
17	13.4	5.5	5.2	chr7	80134270	80134324	(79211649)	+	GA-rich	Low_complexity	1	58	(0)	3677729
10482	13.2	2.2	1.3	chr7	81046708	81047968	(78298005)	+	THE1D-int	LTR/ERVL-MaLR	340	1631	(0)	3679008
8455	6.7	15.8	1.6	chr7	84880388	84881736	(74464237)	+	LTR12C	LTR/ERV1	3	1579	(0)	3684104
3275	24.4	7.0	5.0	chr7	85748966	85750652	(73595321)	+	L1PA7	LINE/L1	644	2076	(5258)	3685163
7155	19.8	2.9	1.8	chr7	85750667	85753063	(73592910)	+	L1PA13	LINE/L1	1227	3650	(3116)	3685164
219	36.1	15.1	1.5	chr7	87933596	87933800	(71412173)	+	L2b	LINE/L2	3132	3369	(6)	3687845
27445	13.9	3.9	1.9	chr7	88542536	88547643	(70798330)	C	HUERS-P3-int	LTR/ERV1	(2360)	5311	4	3688697
1217	7.2	0.0	0.0	chr7	95511536	95511688	(63834285)	+	AluSp	SINE/Alu	157	309	(4)	3698083
195	30.8	21.8	3.4	chr7	95511721	95511898	(63834075)	C	MIRb	SINE/MIR	(48)	220	1	3698084
524	26.8	12.0	0.0	chr7	95511998	95512202	(63833771)	+	MLT1M	LTR/ERVL-MaLR	4	236	(436)	3698085
2634	5.0	0.3	0.0	chr7	97064547	97064848	(62281125)	+	AluY	SINE/Alu	1	303	(8)	3700218
400	10.8	0.2	2.5	chr7	98810993	98811637	(60534336)	+	(TGG)n	Simple_repeat	1	646	(0)	3703453
13	21.7	0.0	2.6	chr7	98878848	98878886	(60467087)	+	(GCGCTCG)n	Simple_repeat	1	39	(0)	3703633
197	32.0	7.2	2.8	chr7	101244545	101244650	(58101323)	+	MIRb	SINE/MIR	155	265	(3)	3708308
998	24.1	13.1	7.8	chr7	103065482	103066081	(56279892)	C	LTR41C	LTR/ERVL	(0)	701	66	3712150
17	10.3	0.0	3.0	chr7	105876749	105876781	(53469192)	+	(CGCC)n	Simple_repeat	1	33	(0)	3716734
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
307	29.8	2.3	0.0	chr7	108433312	108433395	(50912578)	C	MER115	DNA/hAT-Tip100	(451)	242	157	3720516
304	20.8	4.0	1.4	chr7	108433398	108433470	(50912503)	+	MER5A1	DNA/hAT-Charlie	3	77	(89)	3720517
2051	15.6	3.0	5.8	chr7	108433464	108433878	(50912095)	+	MSTB1	LTR/ERVL-MaLR	30	432	(0)	3720518
8586	13.1	6.4	3.7	chr7	118857672	118859203	(40486770)	C	LTR12C	LTR/ERV1	(0)	1579	3	3734485
401	36.0	9.9	3.8	chr7	121178630	121179339	(38166634)	C	L2	LINE/L2	(810)	2609	1852	3737348
2194	15.2	0.3	0.6	chr7	123053500	123053837	(36292136)	+	MER1B	DNA/hAT-Charlie	2	338	(1)	3739922
22823	13.3	2.0	2.3	chr7	123053838	123054343	(36291630)	C	L1M1	LINE/L1	(6437)	1128	631	3739915
185	28.1	15.1	4.3	chr7	123367585	123367725	(35978248)	C	LFSINE_Vert	SINE/tRNA	(0)	459	301	3740321
4445	10.6	3.1	0.1	chr7	123367772	123368423	(35977550)	C	L1PA16	LINE/L1	(9)	6157	5486	3740322
9706	15.8	1.4	1.0	chr7	127445992	127448357	(31897616)	+	L1PA15-16	LINE/L1	2	2274	(4579)	3745755
256	33.8	11.7	0.7	chr7	129829681	129829832	(29516141)	C	MIR3	SINE/MIR	(8)	200	30	3749934
519	33.4	9.0	2.4	chr7	131513028	131513398	(27832575)	C	L2a	LINE/L2	(482)	2937	2540	3752924
735	21.3	13.9	1.7	chr7	135281754	135281930	(24064043)	C	MER58C	DNA/hAT-Charlie	(4)	211	10	3758689
1622	26.0	1.9	4.2	chr7	135281936	135282169	(24063804)	+	Zaphod	DNA/hAT-Tip100	51	273	(3758)	3758690
459	28.6	8.6	5.3	chr7	135511051	135511297	(23834676)	C	L2a	LINE/L2	(3)	3423	3168	3759071
1549	19.1	16.6	4.4	chr7	135717682	135718070	(23627903)	+	MLT2B1	LTR/ERVL	1	446	(74)	3759462
16	0.0	0.0	0.0	chr7	135718071	135718088	(23627885)	+	(AC)n	Simple_repeat	1	18	(0)	3759463
18	8.7	0.0	0.0	chr7	135718088	135718112	(23627861)	+	(CG)n	Simple_repeat	1	25	(0)	3759464
10880	10.5	1.0	0.1	chr7	136115022	136115349	(23230624)	C	L1PA7	LINE/L1	(5810)	1143	698	3760146
436	24.6	0.0	0.2	chr7	136115349	136115469	(23230504)	C	L1PA15-16	LINE/L1	(5479)	1670	1472	3760148
2384	9.9	0.0	0.0	chr7	138008338	138008640	(21337333)	C	AluSg	SINE/Alu	(7)	303	1	3762734
231	17.1	0.0	0.0	chr7	138325359	138325393	(21020580)	+	Tigger3b	DNA/TcMar-Tigger	39	73	(1158)	3763373
19	4.3	0.0	0.0	chr7	138325399	138325422	(21020551)	+	(AT)n	Simple_repeat	1	24	(0)	3763374
389	28.1	4.7	14.0	chr7	139017013	139017269	(20328704)	+	MLT1N2	LTR/ERVL-MaLR	51	282	(280)	3764737
506	26.8	8.5	0.6	chr7	139017317	139017489	(20328484)	+	MLT1N2	LTR/ERVL-MaLR	371	558	(4)	3764737
252	16.3	0.0	0.0	chr7	139523216	139523258	(19822715)	+	L2c	LINE/L2	3337	3379	(8)	3765787
180	20.0	4.2	0.0	chr7	139523491	139523535	(19822438)	C	MIR3	SINE/MIR	(140)	68	22	3765788
22	20.0	6.6	3.1	chr7	139523589	139523679	(19822294)	+	(TCCCCGC)n	Simple_repeat	1	97	(0)	3765789
23	7.9	4.9	6.2	chr7	139523950	139524010	(19821963)	+	(CCCCGCG)n	Simple_repeat	1	64	(0)	3765790
223	33.4	6.5	3.5	chr7	139621127	139621292	(19724681)	C	MIRb	SINE/MIR	(0)	262	96	3765938
339	30.3	10.8	5.0	chr7	139843120	139843315	(19502658)	+	L2c	LINE/L2	3031	3237	(150)	3766283
2253	9.9	0.0	0.0	chr7	139843316	139843642	(19502331)	C	AluSx	SINE/Alu	(0)	312	1	3766284
499	25.8	11.5	3.2	chr7	139866136	139866444	(19479529)	+	L1ME4c	LINE/L1	302	639	(191)	3766328
1813	17.1	1.0	1.3	chr7	139866473	139866776	(19479197)	+	AluJb	SINE/Alu	2	304	(8)	3766329
255	33.7	5.6	4.2	chr7	140003961	140004152	(19341821)	C	MLT1O	LTR/ERVL-MaLR	(168)	374	180	3766558
1445	21.3	2.7	0.0	chr7	140004186	140004504	(19341469)	C	MER45B	DNA/hAT-Tip100	(0)	1040	713	3766559
23	15.1	0.0	2.2	chr7	140479183	140479228	(18866745)	+	(GCC)n	Simple_repeat	1	46	(0)	3767540
13	21.8	0.0	0.0	chr7	140479268	140479300	(18866673)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	3767541
1777	19.2	2.6	5.1	chr7	141460118	141460506	(17885467)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	12	3769322
355	32.9	5.4	0.7	chr7	142460114	142460254	(16885719)	+	L1MEd	LINE/L1	677	824	(6262)	3770648
302	29.7	5.6	4.1	chr7	142497087	142497209	(16848764)	+	L1MEd	LINE/L1	700	824	(6262)	3770678
683	29.5	10.6	6.0	chr7	142684236	142684656	(16661317)	+	L1M4	LINE/L1	3257	3692	(2454)	3770896
2484	8.9	0.0	1.0	chr7	142684657	142684970	(16661003)	+	AluSc8	SINE/Alu	1	311	(0)	3770897
224	26.1	2.8	2.8	chr7	142783220	142783290	(16562683)	+	MIR3	SINE/MIR	92	162	(46)	3770999
1307	25.2	7.5	1.7	chr7	146539853	146540256	(12805717)	C	MER110	LTR/ERV1	(0)	491	63	3776060
5476	8.3	2.6	0.0	chr7	146629996	146630741	(12715232)	C	L1PA8	LINE/L1	(14)	6158	5393	3776181
2299	9.9	0.0	3.4	chr7	146772377	146772698	(12573275)	+	AluSc8	SINE/Alu	1	311	(0)	3776365
446	34.4	8.9	4.4	chr7	146772699	146773044	(12572929)	C	L2a	LINE/L2	(423)	2996	2640	3776364
413	35.6	2.6	5.5	chr7	146773091	146773325	(12572648)	C	L2a	LINE/L2	(1152)	2267	2040	3776364
248	26.9	7.7	0.9	chr7	149006926	149007034	(10338939)	C	Charlie4z	DNA/hAT-Charlie	(34)	133	17	3779809
2632	6.8	0.0	0.0	chr7	149066212	149066519	(10279454)	+	AluSx	SINE/Alu	1	308	(4)	3779939
26	2.6	4.9	2.3	chr7	149091051	149091091	(10254882)	+	(CAGGGA)n	Simple_repeat	1	43	(0)	3780003
1732	16.0	2.2	1.3	chr7	149125674	149125986	(10219987)	C	7SLRNA	srpRNA	(4)	316	1	3780093
16	22.2	3.3	3.2	chr7	149126047	149126118	(10219855)	+	(CCAGGC)n	Simple_repeat	1	72	(0)	3780094
15	0.0	0.0	0.0	chr7	149239672	149239690	(10106283)	+	(CGG)n	Simple_repeat	1	19	(0)	3780360
12	12.1	7.9	2.4	chr7	149240381	149240418	(10105555)	+	(CACC)n	Simple_repeat	1	41	(0)	3780361
12	21.6	5.6	5.3	chr7	149262051	149262121	(10083852)	+	(GCCGCGG)n	Simple_repeat	1	75	(0)	3780412
14	10.1	6.2	0.0	chr7	149262245	149262276	(10083697)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	3780413
20	19.0	0.0	0.0	chr7	149432871	149432912	(9913061)	+	(CTC)n	Simple_repeat	1	42	(0)	3780690
19	16.1	6.0	0.0	chr7	149474814	149474863	(9871110)	+	(CCGCCA)n	Simple_repeat	1	53	(0)	3780752
13	25.0	0.0	0.0	chr7	150398017	150398054	(8947919)	+	(CCAGCA)n	Simple_repeat	1	38	(0)	3782003
14	22.9	9.0	1.2	chr7	151018766	151018843	(8327130)	+	(GCGCAG)n	Simple_repeat	1	85	(0)	3782791
2467	8.2	0.0	0.9	chr7	151619736	151620050	(7725923)	+	AluSx	SINE/Alu	1	312	(0)	3783772
1895	10.0	6.7	7.3	chr7	151620051	151620112	(7725861)	+	Tigger4	DNA/TcMar-Tigger	2675	2731	(0)	3783771
408	25.8	1.5	0.8	chr7	151620158	151620290	(7725683)	C	L1M5	LINE/L1	(2139)	4007	3874	3783773
247	23.5	8.1	2.9	chr7	151736812	151736881	(7609092)	C	Plat_L3	LINE/CR1	(3)	3583	3510	3783969
308	30.5	5.9	0.0	chr7	151736883	151736977	(7608996)	C	MIRb	SINE/MIR	(133)	135	35	3783970
3110	21.2	7.4	2.3	chr7	152403760	152404078	(6941895)	+	L1PA16	LINE/L1	5797	6154	(12)	3785040
8486	7.1	20.1	0.0	chr7	152538165	152539424	(6806549)	C	LTR12C	LTR/ERV1	(0)	1579	2	3785397
2365	7.5	1.0	0.0	chr7	152707260	152707551	(6638422)	+	AluSq2	SINE/Alu	5	299	(14)	3785809
13	9.3	0.0	0.0	chr7	153887438	153887460	(5458513)	+	(CTTT)n	Simple_repeat	1	23	(0)	3787559
13	27.2	2.8	4.1	chr7	155166814	155166884	(4179089)	+	(GCTGA)n	Simple_repeat	1	73	(0)	3789290
16	27.8	1.8	0.0	chr7	156640631	156640686	(2705287)	+	G-rich	Low_complexity	1	57	(0)	3791165
18	15.6	2.1	4.2	chr7	156908881	156908928	(2437045)	+	(AAC)n	Simple_repeat	1	47	(0)	3791541
13	15.2	0.0	7.1	chr7	156909353	156909394	(2436579)	+	(TTATTTT)n	Simple_repeat	1	42	(0)	3791542
946	25.5	13.5	4.7	chr7	157298490	157298759	(2047214)	+	MLT1C	LTR/ERVL-MaLR	184	467	(0)	3792222
385	8.9	0.2	0.0	chr7	158395285	158395820	(950153)	+	(GAGGGGC)n	Simple_repeat	1	537	(0)	3793216
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
15	23.3	4.0	0.0	chr7	158973845	158973894	(372079)	+	(GCCCAG)n	Simple_repeat	1	52	(0)	3793972
297	22.4	4.1	5.7	chr7	159145862	159145984	(199989)	C	L1MC4	LINE/L1	(0)	8042	7922	3794137
392	19.2	17.5	2.7	chr7	159335074	159335241	(10732)	C	L1MC	LINE/L1	(2239)	5546	5354	3794334
2278	19.5	0.8	1.9	chr7	159335248	159335741	(10232)	+	TAR1	Satellite/telo	1	488	(313)	3794336
5249	18.3	11.3	2.1	chr8	205741	207331	(144931305)	C	TAR1	Satellite/telo	(43)	2068	314	3794562
504	20.2	0.0	7.8	chr8	883496	883597	(144255039)	C	L1PA8A	LINE/L1	(0)	6131	6038	3795276
10071	8.9	1.6	0.2	chr8	883716	885825	(144252811)	C	L1PA8A	LINE/L1	(52)	6264	4132	3795277
117	9.9	15.5	1.5	chr8	1763288	1763324	(143375312)	+	(GCC)n	Simple_repeat	1	457	(0)	3796063
119	9.5	5.6	8.2	chr8	1763325	1763682	(143374954)	+	(GCCC)n	Simple_repeat	1	378	(0)	3796064
17	16.3	1.8	7.1	chr8	2001817	2001823	(143136813)	+	(GCC)n	Simple_repeat	1	55	(0)	3796320
11	16.3	4.3	6.1	chr8	2001824	2001870	(143136766)	+	(CGCGCCAC)n	Simple_repeat	1	49	(0)	3796321
182	21.9	0.0	0.0	chr8	3900318	3900358	(141238278)	+	L3	LINE/CR1	3022	3062	(1037)	3798704
75	47.4	0.3	0.3	chr8	6076958	6077528	(139061108)	+	(GT)n	Simple_repeat	1	573	(0)	3801466
214	21.4	0.0	0.0	chr8	10977051	10977092	(134161544)	C	MIRc	SINE/MIR	(150)	118	77	3808865
258	35.9	7.9	0.0	chr8	10977169	10977296	(134161340)	C	MIR3	SINE/MIR	(26)	182	44	3808866
227	31.4	7.3	1.9	chr8	10977400	10977503	(134161133)	+	L3	LINE/CR1	3891	4000	(99)	3808867
279	28.6	2.3	0.0	chr8	21874900	21874983	(123263653)	+	Tigger16a	DNA/TcMar-Tigger	112	197	(760)	3825189
13	13.3	0.0	5.3	chr8	21875060	21875074	(123263562)	+	(CACTCA)n	Simple_repeat	1	15	(0)	3825190
2034	13.8	0.0	0.3	chr8	21875075	21875372	(123263264)	C	AluSx3	SINE/Alu	(14)	297	1	3825191
1739	18.0	0.7	0.3	chr8	26655215	26655508	(118483128)	+	AluJr	SINE/Alu	1	295	(17)	3833117
13	8.1	3.9	0.0	chr8	26655587	26655612	(118483024)	+	(CCTCT)n	Simple_repeat	1	27	(0)	3833118
21	4.1	0.0	0.0	chr8	26655784	26655808	(118482828)	+	(T)n	Simple_repeat	1	25	(0)	3833119
281	31.5	2.6	2.0	chr8	27591811	27591962	(117546674)	C	Charlie16a	DNA/hAT-Charlie	(127)	215	63	3834629
781	28.1	14.8	4.0	chr8	28072902	28073005	(117065631)	C	MamGypLTR3	LTR/Gypsy	(235)	659	560	3835498
1750	14.1	0.7	3.8	chr8	28073006	28073296	(117065340)	C	AluJb	SINE/Alu	(14)	298	17	3835499
781	28.1	14.8	4.0	chr8	28073297	28073688	(117064948)	C	MamGypLTR3	LTR/Gypsy	(335)	559	100	3835498
506	23.9	20.7	0.0	chr8	28319054	28319241	(116819395)	C	MIRc	SINE/MIR	(1)	267	31	3835912
16	16.4	0.0	0.0	chr8	28701422	28701455	(116437181)	+	(CGCGCC)n	Simple_repeat	1	34	(0)	3836721
18	0.0	0.0	0.0	chr8	28701618	28701640	(116436996)	+	(GGC)n	Simple_repeat	1	23	(0)	3836722
2197	11.2	6.6	3.7	chr8	29647627	29647979	(115490657)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3838282
246	34.1	6.2	0.0	chr8	30083467	30083557	(115055079)	+	L2b	LINE/L2	3289	3418	(8)	3838998
10933	17.1	7.1	8.0	chr8	34890714	34893377	(110245259)	+	HUERS-P3b-int	LTR/ERV1	4	2642	(4776)	3846787
41	0.0	0.0	0.0	chr8	38184467	38184504	(106954132)	+	(AAATA)n	Simple_repeat	1	38	(0)	3851826
598	25.6	13.2	2.5	chr8	38184505	38184578	(106954058)	C	LTR50	LTR/ERVL	(254)	541	472	3851824
504	20.0	20.7	2.0	chr8	38184609	38184807	(106953829)	C	LTR50	LTR/ERVL	(516)	279	34	3851824
2358	8.7	0.0	0.3	chr8	38184809	38185106	(106953530)	+	AluSg	SINE/Alu	1	297	(13)	3851827
241	35.1	5.6	2.9	chr8	38425677	38425814	(106712822)	+	MIRb	SINE/MIR	102	243	(25)	3852262
398	23.3	0.6	2.8	chr8	38425886	38426014	(106712622)	C	MIRc	SINE/MIR	(74)	188	68	3852263
2855	8.9	1.5	1.0	chr8	39995571	39995956	(105142680)	+	LTR13	LTR/ERVK	19	406	(601)	3854662
935	20.1	3.2	3.6	chr8	41093508	41093679	(104044957)	C	MER33	DNA/hAT-Charlie	(80)	244	73	3856397
184	20.2	1.8	3.6	chr8	41093705	41093768	(104044868)	C	MIR3	SINE/MIR	(50)	158	95	3856399
600	26.4	1.9	1.9	chr8	41094103	41094260	(104044376)	C	MER63A	DNA/hAT-Blackjack	(52)	158	1	3856400
2384	9.9	0.3	0.3	chr8	41420833	41421145	(103717491)	C	AluSp	SINE/Alu	(0)	313	1	3856959
1497	22.8	5.0	0.3	chr8	41421345	41421665	(103716971)	C	MER58B	DNA/hAT-Charlie	(1)	340	4	3856960
2091	14.6	0.0	0.0	chr8	41429812	41430119	(103708517)	+	AluSx1	SINE/Alu	2	309	(3)	3856980
1091	29.1	6.7	7.7	chr8	41430120	41430343	(103708293)	+	L1ME3G	LINE/L1	353	573	(351)	3856979
679	22.3	6.8	9.5	chr8	41430344	41430586	(103708050)	C	MER106A	DNA/hAT-Charlie	(0)	236	1	3856981
2494	18.4	7.8	3.3	chr8	41687203	41687715	(103450921)	+	LTR26C	LTR/ERV1	2	539	(0)	3857438
19	26.1	1.4	2.7	chr8	41767657	41767728	(103370908)	+	G-rich	Low_complexity	1	73	(0)	3857562
15	25.2	1.2	7.3	chr8	42153361	42153441	(102985195)	+	(GCGCCT)n	Simple_repeat	1	82	(0)	3858238
633	14.7	0.0	7.8	chr8	42153654	42153782	(102984854)	C	FLAM_C	SINE/Alu	(11)	132	14	3858239
273	33.3	1.0	0.0	chr8	42411892	42411990	(102726646)	+	L2	LINE/L2	2337	2436	(983)	3858742
363	27.8	13.8	6.1	chr8	42412697	42412976	(102725660)	C	L3b	LINE/CR1	(198)	5034	4730	3858743
5745	12.7	1.6	1.1	chr8	48327204	48328406	(96810230)	+	L1PA15	LINE/L1	4957	6165	(0)	3863213
192	32.3	7.2	7.5	chr8	50398316	50398596	(94740040)	+	L2c	LINE/L2	2925	3204	(183)	3865603
11	27.7	0.0	0.0	chr8	52939994	52940032	(92198604)	+	(GGTGCC)n	Simple_repeat	1	39	(0)	3868908
195	35.2	0.0	0.0	chr8	56093528	56093581	(89045055)	+	L2c	LINE/L2	3283	3336	(51)	3873542
23570	6.5	1.0	0.4	chr8	56146153	56152289	(88986347)	C	L1PA5	LINE/L1	(1)	6153	4	3873613
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
285	34.2	6.9	7.3	chr8	71335967	71336184	(73802452)	C	MIRb	SINE/MIR	(21)	241	25	3895099
269	37.2	5.5	2.8	chr8	71336331	71336471	(73802165)	+	L3	LINE/CR1	3951	4095	(4)	3895100
271	19.4	4.3	1.5	chr8	71975658	71975725	(73162911)	C	UCON132b	DNA/hAT-Tip100	(20)	128	59	3895897
653	9.9	0.0	0.0	chr8	72847074	72847164	(72291472)	C	L1PA7	LINE/L1	(6365)	96	6	3896987
2422	9.3	0.0	0.6	chr8	74170953	74171265	(70967371)	C	AluYj4	SINE/Alu	(0)	311	1	3899308
406	28.4	5.2	7.1	chr8	74171266	74171331	(70967305)	+	MamGypLTR3a	LTR/Gypsy	164	223	(758)	3899307
581	29.3	12.1	3.2	chr8	74171509	74171822	(70966814)	+	MamGypLTR3a	LTR/Gypsy	540	972	(9)	3899307
39	7.9	1.8	0.0	chr8	75408225	75408279	(69730357)	+	(AG)n	Simple_repeat	1	56	(0)	3900916
9953	10.6	0.1	0.7	chr8	85742400	85743923	(59394713)	C	L1P1	LINE/L1	(2125)	4021	2507	3914963
478	23.1	0.0	0.0	chr8	88289599	88289689	(56848947)	C	Tigger17b	DNA/TcMar-Tigger	(0)	1073	983	3918428
49	0.0	0.0	0.0	chr8	88289690	88289731	(56848905)	+	(AC)n	Simple_repeat	1	42	(0)	3918429
325	36.6	5.1	2.1	chr8	88289741	88289930	(56848706)	C	MIRb	SINE/MIR	(67)	201	6	3918430
920	28.0	0.0	0.5	chr8	88289959	88290166	(56848470)	C	Tigger17c	DNA/TcMar-Tigger	(981)	207	1	3918431
2256	10.7	0.7	0.0	chr8	94724574	94724887	(50413749)	C	AluSx	SINE/Alu	(0)	312	1	3927435
516	27.0	5.2	4.0	chr8	98080177	98080375	(47058261)	C	MIRb	SINE/MIR	(36)	232	27	3933085
31	0.0	0.0	0.0	chr8	98923829	98923855	(46214781)	+	(GT)n	Simple_repeat	1	27	(0)	3934454
20	0.0	0.0	0.0	chr8	98923856	98923877	(46214759)	+	(CG)n	Simple_repeat	1	22	(0)	3934455
12	23.0	2.7	0.0	chr8	98939116	98939152	(46199484)	+	(ATGA)n	Simple_repeat	1	38	(0)	3934476
12	23.1	0.0	2.6	chr8	98939197	98939234	(46199402)	+	GA-rich	Low_complexity	1	38	(0)	3934477
1782	13.7	0.4	0.0	chr8	100735233	100735480	(44403156)	+	AluSx	SINE/Alu	1	249	(63)	3937359
38	0.0	2.6	0.0	chr8	100735483	100735521	(44403115)	+	(AAAC)n	Simple_repeat	1	40	(0)	3937360
464	26.3	4.0	1.8	chr8	101300893	101301062	(43837574)	+	MER5B	DNA/hAT-Charlie	2	175	(3)	3938506
313	31.4	8.2	8.2	chr8	101301073	101301342	(43837294)	+	L2b	LINE/L2	3106	3375	(0)	3938507
21	22.7	0.0	0.0	chr8	101301693	101301738	(43836898)	+	(TG)n	Simple_repeat	1	46	(0)	3938508
249	28.3	5.7	2.0	chr8	101756131	101756231	(43382405)	+	MamGypLTR3a	LTR/Gypsy	185	289	(605)	3939283
728	29.4	5.6	4.5	chr8	101756395	101756729	(43381907)	+	MamGypLTR3a	LTR/Gypsy	643	981	(0)	3939283
463	21.3	10.9	1.9	chr8	102528384	102528541	(42610095)	C	MIR	SINE/MIR	(66)	196	23	3940562
108	16.2	2.7	3.7	chr8	102528542	102528802	(42609834)	+	(GTGCTGT)n	Simple_repeat	1	268	(0)	3940563
2558	5.3	0.0	3.1	chr8	103370997	103371174	(41767462)	+	AluY	SINE/Alu	141	309	(2)	3942200
16	11.7	0.0	0.0	chr8	103371702	103371729	(41766907)	+	(CTG)n	Simple_repeat	1	28	(0)	3942202
13	21.9	3.9	3.7	chr8	103371881	103371932	(41766704)	+	(GTCT)n	Simple_repeat	1	54	(0)	3942203
14	9.7	5.7	2.7	chr8	104466965	104466999	(40671637)	+	G-rich	Low_complexity	1	37	(0)	3943763
16605	20.6	2.7	3.4	chr8	110790307	110792671	(34345965)	+	MER21-int	LTR/ERVL	714	3078	(1113)	3952686
44	0.0	0.0	0.0	chr8	110792672	110792709	(34345927)	+	(CA)n	Simple_repeat	1	38	(0)	3952689
16605	20.6	2.7	3.4	chr8	110792710	110793791	(34344845)	+	MER21-int	LTR/ERVL	3079	4136	(55)	3952686
5988	12.1	1.7	2.1	chr8	111100437	111101394	(34037242)	+	LTR13_	LTR/ERVK	1	954	(0)	3953076
9874	6.6	14.8	0.3	chr8	116530907	116532253	(28606383)	+	LTR12C	LTR/ERV1	3	1579	(0)	3960166
8321	10.2	14.5	0.5	chr8	116948945	116950299	(28188337)	C	LTR12C	LTR/ERV1	(0)	1579	3	3960884
5589	25.1	5.9	3.6	chr8	119768677	119769762	(25368874)	+	L1PA15-16	LINE/L1	1469	2591	(4727)	3965344
18902	14.8	1.8	1.4	chr8	122466149	122469289	(22669347)	+	L1PREC2	LINE/L1	11	3166	(3600)	3969909
272	16.0	2.6	10.7	chr8	123160278	123160361	(21978275)	+	L1ME4b	LINE/L1	805	881	(11)	3971286
38	17.2	4.8	2.7	chr8	123160412	123160516	(21978120)	+	GA-rich	Low_complexity	1	110	(0)	3971287
1147	15.2	0.5	0.0	chr8	129303199	129303395	(15835241)	C	L1PBa	LINE/L1	(6663)	200	3	3982900
4630	20.0	2.8	0.8	chr8	129303416	129304265	(15834371)	C	L1PA15-16	LINE/L1	(5200)	1653	787	3982901
232	32.5	0.0	0.0	chr8	132191992	132192068	(12946568)	C	L2c	LINE/L2	(998)	2421	2345	3988080
251	28.7	4.4	6.9	chr8	134713321	134713436	(10425200)	+	MIRc	SINE/MIR	28	140	(128)	3992735
244	21.7	0.0	3.2	chr8	134713669	134713730	(10424906)	+	MER113	DNA/hAT-Charlie	245	304	(217)	3992736
6680	16.7	4.4	2.5	chr8	134887903	134890087	(10248549)	C	L1MB7	LINE/L1	(19)	6663	4430	3993072
427	9.8	0.4	6.4	chr8	139803989	139804811	(5333825)	+	(CAC)n	Simple_repeat	1	826	(0)	4000906
2246	11.6	0.3	0.3	chr8	141168857	141169158	(3969478)	C	AluSz	SINE/Alu	(10)	302	1	4003294
245	31.9	3.1	0.0	chr8	141507953	141508046	(3630590)	C	MIRc	SINE/MIR	(142)	126	30	4003723
14	23.9	9.6	1.9	chr8	142624270	142624363	(2514273)	+	(GTCCCT)n	Simple_repeat	1	103	(0)	4005115
23	21.5	3.6	7.0	chr8	142669794	142669904	(2468732)	+	(CCCG)n	Simple_repeat	1	115	(0)	4005161
8255	6.4	0.4	0.1	chr8	143058136	143059139	(2079497)	C	LTR13	LTR/ERVK	(0)	1007	1	4005662
11	11.5	10.0	2.3	chr8	143567199	143567238	(1571398)	+	(CCCGAGC)n	Simple_repeat	1	44	(0)	4006346
12	20.2	4.1	3.9	chr8	143567319	143567367	(1571269)	+	G-rich	Low_complexity	1	51	(0)	4006347
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
11	21.7	7.3	1.7	chr8	143707519	143707573	(1431063)	+	(CAGCTC)n	Simple_repeat	1	59	(0)	4006557
20	12.2	0.0	7.7	chr8	143707595	143707647	(1430989)	+	(CCCCG)n	Simple_repeat	1	48	(0)	4006558
13	27.1	3.4	1.6	chr8	143727716	143727774	(1410862)	+	(CGCCTC)n	Simple_repeat	1	61	(0)	4006581
12	15.8	9.5	0.0	chr8	143727836	143727877	(1410759)	+	G-rich	Low_complexity	1	46	(0)	4006582
12	15.6	3.5	0.0	chr8	143790296	143790324	(1348312)	+	(CACCC)n	Simple_repeat	1	30	(0)	4006683
25	20.6	0.0	0.0	chr8	143857873	143857922	(1280714)	+	A-rich	Low_complexity	1	50	(0)	4006761
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
2078	22.2	6.5	2.2	chr8	144299980	144300210	(838426)	+	L1MC3	LINE/L1	7058	7288	(497)	4007426
2346	7.0	2.3	0.3	chr8	144300211	144300510	(838126)	C	AluYf1	SINE/Alu	(5)	306	1	4007427
2640	3.9	0.0	0.0	chr8	144428784	144429088	(709548)	C	AluY	SINE/Alu	(6)	305	1	4007614
13	23.2	0.0	5.9	chr8	144530282	144530332	(608304)	+	G-rich	Low_complexity	1	51	(0)	4007708
5432	19.0	9.1	0.8	chr8	144574851	144575978	(562658)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	1	4007763
1283	23.2	16.5	4.7	chr8	144757381	144757513	(381123)	C	LTR75B	LTR/ERVL	(2)	606	488	4008047
1998	17.0	0.0	0.0	chr8	144757514	144757819	(380817)	C	AluSq2	SINE/Alu	(7)	306	1	4008048
8028	5.0	0.8	0.0	chr8	144869550	144870548	(268088)	+	LTR13	LTR/ERVK	1	1007	(0)	4008232
221	24.7	10.8	1.1	chr8	144901812	144901987	(236649)	+	L2a	LINE/L2	2962	3156	(270)	4008270
275	8.3	2.7	0.0	chr8	144944479	144944514	(194122)	C	AluYk11	SINE/Alu	(274)	37	1	4008348
1812	24.5	8.8	3.6	chr8	144944515	144945122	(193514)	C	L1MB5	LINE/L1	(6268)	1352	710	4008334
3831	12.7	31.0	1.2	chr9	10436	11574	(138383143)	C	TAR1	Satellite/telo	(13)	2098	469	4008490
15	11.7	0.0	0.0	chr9	113520	113547	(138281170)	+	(CGCGG)n	Simple_repeat	1	28	(0)	4008657
36	20.4	2.8	3.6	chr9	977289	977396	(137417321)	+	(GCC)n	Simple_repeat	1	111	(0)	4010080
4218	23.6	7.8	4.2	chr9	3441091	3441918	(134952799)	+	L1MC3	LINE/L1	6371	7206	(579)	4013617
17147	15.8	1.1	4.2	chr9	4196802	4201854	(134192863)	+	L1PA16	LINE/L1	633	5360	(1489)	4014650
44	0.0	0.0	0.0	chr9	7052864	7052901	(131341816)	+	(AG)n	Simple_repeat	1	38	(0)	4019176
19	19.6	0.0	0.0	chr9	12775843	12775883	(125618834)	+	(GCG)n	Simple_repeat	1	41	(0)	4026707
15	28.1	0.0	0.0	chr9	12775864	12775907	(125618810)	+	(GCA)n	Simple_repeat	1	44	(0)	4026708
13	23.9	0.0	2.4	chr9	12775911	12775951	(125618766)	+	(CCT)n	Simple_repeat	1	41	(0)	4026709
27	20.2	2.4	8.5	chr9	19464859	19464985	(118929732)	+	(GCTGCGG)n	Simple_repeat	1	130	(0)	4036382
13909	17.2	3.1	3.0	chr9	25963937	25965119	(112429598)	C	HUERS-P3b-int	LTR/ERV1	(6227)	1191	17	4045034
559	30.5	15.2	2.8	chr9	26856514	26856800	(111537917)	C	L3	LINE/CR1	(7)	4092	3764	4046232
17239	10.9	1.5	1.1	chr9	32128253	32133068	(106261649)	+	L1PA10	LINE/L1	2	4864	(1597)	4053274
554	19.6	11.4	4.7	chr9	33523236	33523406	(104871311)	C	L1MA9	LINE/L1	(3)	6309	6126	4055613
1250	18.5	5.1	10.8	chr9	33738380	33738877	(104655840)	+	L1MEc	LINE/L1	779	1246	(5154)	4055895
1265	23.7	10.2	5.2	chr9	33777725	33778710	(104616007)	+	L1MEg	LINE/L1	3727	4531	(1615)	4055971
9916	13.5	2.2	2.3	chr9	33778709	33779586	(104615131)	+	L1PA16	LINE/L1	940	1801	(4702)	4055972
416	29.5	0.0	1.8	chr9	35658839	35658952	(102735765)	+	MIRc	SINE/MIR	125	236	(32)	4059252
2446	8.5	0.0	2.2	chr9	36328433	36328749	(102065968)	+	AluSx1	SINE/Alu	2	311	(1)	4060433
299	31.7	9.3	2.8	chr9	36793149	36793538	(101601179)	C	Tigger16a	DNA/TcMar-Tigger	(460)	497	80	4061466
491	24.6	15.5	4.6	chr9	36793589	36793805	(101600912)	C	MIR	SINE/MIR	(16)	246	2	4061473
646	20.8	7.2	0.0	chr9	36991336	36991489	(101403228)	C	MIR3	SINE/MIR	(10)	198	33	4061845
668	25.9	12.2	1.7	chr9	36991695	36991988	(101402729)	+	Tigger16a	DNA/TcMar-Tigger	92	420	(537)	4061846
744	12.9	3.4	4.1	chr9	37079005	37079150	(101315567)	+	LTR23	LTR/ERV1	293	437	(0)	4062024
14	16.4	5.8	3.6	chr9	38424241	38424292	(99970425)	+	G-rich	Low_complexity	1	55	(0)	4064578
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
11	32.6	0.0	1.8	chr9	62800083	62800137	(75594580)	+	G-rich	Low_complexity	1	55	(0)	4073671
734	9.3	2.5	2.5	chr9	62802318	62802438	(75592279)	C	5S	rRNA	(0)	121	1	4073675
3051	15.5	2.6	0.5	chr9	62838347	62838981	(75555736)	+	TAR1	Satellite/telo	1420	2068	(43)	4073704
556	20.2	1.8	9.8	chr9	62864476	62864711	(75530006)	C	MER52A	LTR/ERV1	(1538)	217	1	4073744
1381	16.6	4.3	4.0	chr9	62864713	62865033	(75529684)	+	LTR8	LTR/ERV1	365	686	(5)	4073745
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
759	21.6	5.8	1.8	chr9	69035205	69035421	(69359296)	C	MIR	SINE/MIR	(2)	260	35	4080838
14	10.0	6.2	0.0	chr9	69035827	69035858	(69358859)	+	(ACCCAG)n	Simple_repeat	1	34	(0)	4080839
23	19.6	4.7	0.0	chr9	69035970	69036033	(69358684)	+	(GCCGCAC)n	Simple_repeat	1	67	(0)	4080840
197	33.9	8.9	0.9	chr9	69549257	69549369	(68845348)	+	L2b	LINE/L2	3238	3360	(15)	4081752
2537	16.5	4.1	2.3	chr9	70677047	70677523	(67717194)	+	MER66B	LTR/ERV1	1	486	(0)	4083578
2572	19.2	6.7	3.9	chr9	70677524	70677844	(67716873)	+	MER39	LTR/ERV1	382	705	(2)	4083577
12	29.1	4.0	2.6	chr9	71446942	71447015	(66947702)	+	(GCCTCC)n	Simple_repeat	1	77	(0)	4084667
583	30.4	9.3	7.6	chr9	72139961	72140380	(66254337)	+	MLT1K	LTR/ERVL-MaLR	3	430	(165)	4085947
474	34.2	6.0	5.8	chr9	72808074	72808585	(65586132)	+	L2a	LINE/L2	2829	3353	(73)	4087199
22097	10.7	3.1	0.8	chr9	73066772	73072322	(65322395)	+	L1PB1	LINE/L1	834	6498	(369)	4087563
13	5.3	0.0	0.0	chr9	74952304	74952323	(63442394)	+	(GGC)n	Simple_repeat	1	20	(0)	4090268
1762	8.0	3.6	0.5	chr9	76571733	76572034	(61822683)	+	LSU-rRNA_Hsa	rRNA	4695	5034	(1)	4092814
210	23.9	10.7	4.2	chr9	76996999	76997094	(61397623)	C	MIR3	SINE/MIR	(76)	132	30	4093521
2566	5.1	0.3	1.9	chr9	81960671	81960986	(56433731)	+	AluYa5	SINE/Alu	1	311	(0)	4100835
1193	14.1	1.1	0.5	chr9	81960987	81961171	(56433546)	+	AluSq2	SINE/Alu	126	311	(2)	4100836
975	19.9	4.5	0.8	chr9	81961173	81961410	(56433307)	C	L1MCa	LINE/L1	(4087)	2421	2175	4100834
1802	16.6	0.7	2.2	chr9	85743913	85744225	(52650492)	C	AluJo	SINE/Alu	(0)	312	5	4106658
565	21.5	8.6	1.6	chr9	86286971	86287164	(52107553)	+	L1M6	LINE/L1	1535	1743	(4753)	4107654
313	24.8	6.5	5.8	chr9	86287282	86287418	(52107299)	C	L1M6	LINE/L1	(4602)	1894	1757	4107655
211	30.8	6.7	10.5	chr9	90305821	90306114	(48088603)	+	L2	LINE/L2	343	624	(2795)	4113666
233	35.6	2.4	7.4	chr9	90306368	90306492	(48088225)	C	L2	LINE/L2	(563)	2856	2730	4113667
6421	23.6	4.4	1.9	chr9	92890065	92891628	(45503089)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	28	4117371
1131	15.8	1.2	0.0	chr9	92956831	92957001	(45437716)	C	AluJb	SINE/Alu	(4)	308	136	4117474
2115	22.4	2.1	3.6	chr9	92957014	92957663	(45437054)	C	L1ME2	LINE/L1	(327)	5837	5198	4117473
492	25.0	5.3	6.5	chr9	93154193	93154378	(45240339)	C	L1ME2	LINE/L1	(891)	5255	5067	4117806
508	19.6	13.2	2.1	chr9	93154383	93154523	(45240194)	+	LTR41B	LTR/ERVL	11	169	(589)	4117810
258	26.8	13.3	8.7	chr9	93154602	93154830	(45239887)	+	LTR41B	LTR/ERVL	316	556	(202)	4117810
381	32.4	10.1	0.0	chr9	93159728	93159897	(45234820)	+	MIRb	SINE/MIR	42	230	(38)	4117824
3321	13.2	10.2	5.4	chr9	93160252	93160395	(45234322)	+	L1MB7	LINE/L1	5110	5270	(876)	4117825
2341	8.7	0.0	1.0	chr9	93160396	93160695	(45234022)	C	AluSq	SINE/Alu	(16)	297	1	4117826
19	18.1	0.0	0.0	chr9	93959422	93959460	(44435257)	+	(T)n	Simple_repeat	1	39	(0)	4118820
3517	11.0	2.9	0.4	chr9	95671956	95672467	(42722250)	+	L1PA16	LINE/L1	5633	6157	(9)	4121564
192	34.2	2.5	2.5	chr9	98974888	98974968	(39419749)	+	MIR3	SINE/MIR	17	97	(111)	4127622
226	32.3	7.0	0.0	chr9	99411990	99412082	(38982635)	C	X6A_LINE	LINE/CR1	(931)	149	50	4128410
367	25.9	2.1	9.2	chr9	100472715	100472867	(37921850)	+	MIRc	SINE/MIR	25	166	(102)	4130225
11	21.0	2.5	2.4	chr9	100473025	100473064	(37921653)	+	(GCGGCC)n	Simple_repeat	1	41	(0)	4130226
27	13.1	0.0	0.0	chr9	104926447	104926488	(33468229)	+	(A)n	Simple_repeat	1	42	(0)	4136496
15	21.3	8.3	0.0	chr9	104926641	104926700	(33468017)	+	(CCAGC)n	Simple_repeat	1	65	(0)	4136497
2309	8.6	2.6	0.0	chr9	104926930	104927231	(33467486)	+	AluSx	SINE/Alu	1	310	(2)	4136498
2064	12.2	0.0	5.3	chr9	105258683	105259001	(33135716)	C	AluSx1	SINE/Alu	(7)	305	4	4137250
15	26.3	5.4	1.3	chr9	107283703	107283776	(31110941)	+	G-rich	Low_complexity	1	78	(0)	4140362
303	32.1	12.2	5.7	chr9	107296220	107296533	(31098184)	C	L1M5	LINE/L1	(477)	5647	5311	4140380
1853	12.0	11.3	0.0	chr9	107296567	107296833	(31097884)	C	AluSz6	SINE/Alu	(10)	302	2	4140381
2272	10.8	0.3	1.9	chr9	107296838	107297151	(31097566)	C	AluSc	SINE/Alu	(0)	309	1	4140382
210	29.9	13.4	0.0	chr9	108933357	108933453	(29461264)	C	L2c	LINE/L2	(16)	3371	3260	4143524
12	18.4	5.4	0.0	chr9	108933745	108933781	(29460936)	+	(GCAGCCC)n	Simple_repeat	1	39	(0)	4143525
16	9.3	0.0	0.0	chr9	108934333	108934355	(29460362)	+	(G)n	Simple_repeat	1	23	(0)	4143526
12	28.1	1.7	3.3	chr9	111525290	111525348	(26869369)	+	G-rich	Low_complexity	1	60	(0)	4148038
14	3.7	10.7	0.0	chr9	111525365	111525392	(26869325)	+	(GCT)n	Simple_repeat	1	31	(0)	4148039
712	21.8	1.6	10.1	chr9	111525455	111525663	(26869054)	C	MER20	DNA/hAT-Charlie	(12)	207	17	4148040
2401	8.2	0.3	0.3	chr9	112097396	112097698	(26297019)	C	AluSq2	SINE/Alu	(10)	303	1	4149152
2192	20.6	7.8	0.2	chr9	121059559	121060053	(17334664)	+	MLT1F	LTR/ERVL-MaLR	1	536	(12)	4166270
667	30.2	8.9	3.5	chr9	122379274	122379558	(16015159)	C	MamGypLTR3a	LTR/Gypsy	(0)	981	680	4168934
231	32.2	6.2	1.1	chr9	122379792	122379882	(16014835)	C	MamGypLTR3a	LTR/Gypsy	(541)	440	345	4168934
317	30.6	3.6	1.8	chr9	122379904	122380013	(16014704)	C	MamGypLTR3a	LTR/Gypsy	(741)	240	129	4168934
3037	25.8	6.1	5.5	chr9	122415012	122416061	(15978656)	C	L1ME2	LINE/L1	(1763)	4383	3337	4168985
2035	15.7	0.3	0.0	chr9	122416064	122416362	(15978355)	C	AluJb	SINE/Alu	(11)	301	2	4168993
3904	11.6	1.0	4.0	chr9	122416391	122416739	(15977978)	C	LTR8	LTR/ERV1	(107)	584	256	4168994
13	30.1	4.3	0.0	chr9	124777138	124777206	(13617511)	+	G-rich	Low_complexity	1	72	(0)	4173200
15	30.0	1.8	0.0	chr9	124777274	124777330	(13617387)	+	(GCT)n	Simple_repeat	1	58	(0)	4173201
14	24.5	0.0	2.2	chr9	125143341	125143385	(13251332)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	4173996
2411	7.3	0.7	0.3	chr9	125177093	125177393	(13217324)	+	AluY	SINE/Alu	1	302	(9)	4174064
5893	11.3	5.1	5.7	chr9	125177394	125177415	(13217302)	C	L1MC1	LINE/L1	(66)	6267	6267	4174063
777	19.3	0.0	0.7	chr9	125177416	125177555	(13217162)	+	FLAM_C	SINE/Alu	2	140	(3)	4174065
5893	11.5	5.3	5.6	chr9	125177556	125178506	(13216211)	C	L1MC1	LINE/L1	(66)	6267	5291	4174063
1162	22.8	15.7	2.8	chr9	126008511	126008848	(12385869)	C	LTR16A1	LTR/ERVL	(55)	401	1	4175667
532	27.5	11.1	8.6	chr9	126008990	126009487	(12385230)	+	MamGypLTR3a	LTR/Gypsy	436	947	(34)	4175669
19	17.2	2.6	0.0	chr9	126228638	126228676	(12166041)	+	(AC)n	Simple_repeat	1	40	(0)	4176077
21	27.2	2.8	1.4	chr9	126228839	126228910	(12165807)	+	(CA)n	Simple_repeat	1	74	(0)	4176078
633	28.2	18.9	1.8	chr9	126681224	126681621	(11713096)	+	L2a	LINE/L2	2349	2823	(596)	4176822
2382	11.0	0.0	0.0	chr9	126681622	126681930	(11712787)	+	AluSx1	SINE/Alu	4	312	(0)	4176823
17	18.2	0.0	0.0	chr9	126835220	126835250	(11559467)	+	A-rich	Low_complexity	1	31	(0)	4177154
582	23.5	12.2	3.2	chr9	127770841	127771025	(10623692)	+	MIR	SINE/MIR	3	206	(62)	4178978
23	8.6	0.0	2.5	chr9	127771613	127771652	(10623065)	+	(CCGCC)n	Simple_repeat	1	40	(0)	4178979
401	29.7	5.9	0.8	chr9	128034799	128034927	(10359790)	+	MIR3	SINE/MIR	36	171	(37)	4179615
1407	13.7	1.9	0.4	chr9	128035572	128035835	(10358882)	+	L1MA4A	LINE/L1	6031	6298	(5)	4179616
16	16.6	4.2	8.0	chr9	129610534	129610605	(8784112)	+	(CGGAGG)n	Simple_repeat	1	75	(0)	4183245
444	22.2	4.8	0.0	chr9	129726428	129726526	(8668191)	+	MIR	SINE/MIR	74	177	(85)	4183491
250	26.9	0.0	4.9	chr9	130692136	130692217	(7702500)	+	MIRb	SINE/MIR	150	227	(41)	4185600
209	34.7	2.7	0.0	chr9	130692327	130692398	(7702319)	+	MIRb	SINE/MIR	115	188	(80)	4185601
270	19.9	0.7	0.2	chr9	130958574	130959111	(7435606)	+	(CACCAC)n	Simple_repeat	1	542	(0)	4186091
22	16.9	2.1	0.0	chr9	131178944	131178990	(7215727)	+	(TTG)n	Simple_repeat	1	48	(0)	4186555
1691	17.7	0.7	2.9	chr9	131178991	131179301	(7215416)	C	AluJb	SINE/Alu	(8)	304	1	4186556
14	14.9	5.4	0.0	chr9	131393728	131393764	(7000953)	+	(CCCAGG)n	Simple_repeat	1	39	(0)	4187011
13	18.8	4.5	2.2	chr9	131393757	131393800	(7000917)	+	(CCTGGCT)n	Simple_repeat	1	46	(0)	4187012
33	16.2	14.3	1.1	chr9	131394000	131394160	(7000557)	+	(GCGA)n	Simple_repeat	1	184	(0)	4187013
16	18.4	3.3	9.7	chr9	131394159	131394248	(7000469)	+	(GCCCC)n	Simple_repeat	1	93	(0)	4187014
1131	17.8	0.0	0.0	chr9	131534305	131534478	(6860239)	+	AluSc8	SINE/Alu	134	307	(4)	4187234
698	12.6	0.0	0.0	chr9	131534623	131534733	(6859984)	+	L1MC1	LINE/L1	6199	6309	(24)	4187235
2357	9.1	0.3	0.3	chr9	131535132	131535438	(6859279)	C	AluSx1	SINE/Alu	(5)	307	1	4187236
479	26.1	2.2	1.5	chr9	131535441	131535576	(6859141)	C	MIR	SINE/MIR	(57)	205	69	4187237
15	23.1	0.0	2.6	chr9	131535616	131535653	(6859064)	+	(AC)n	Simple_repeat	1	38	(0)	4187238
13	17.1	0.0	8.5	chr9	131545405	131545451	(6849266)	+	(CAGG)n	Simple_repeat	1	47	(0)	4187265
354	28.1	8.9	1.8	chr9	131555094	131555321	(6839396)	C	L2b	LINE/L2	(178)	3197	2952	4187279
2014	10.6	4.2	0.0	chr9	133022713	133022870	(5371847)	C	AluSx1	SINE/Alu	(21)	291	134	4189937
28	0.0	0.0	0.0	chr9	133022871	133022897	(5371820)	+	(T)n	Simple_repeat	1	27	(0)	4189938
2014	10.6	4.2	0.0	chr9	133022898	133023013	(5371704)	C	AluSx1	SINE/Alu	(192)	120	5	4189937
44	4.4	0.0	0.0	chr9	133533151	133533197	(4861520)	+	(GT)n	Simple_repeat	1	47	(0)	4190732
213	31.7	11.5	0.8	chr9	133533255	133533378	(4861339)	+	MIRc	SINE/MIR	31	169	(99)	4190733
235	32.9	6.0	0.0	chr9	133533465	133533543	(4861174)	+	MIRc	SINE/MIR	96	179	(89)	4190734
2118	11.8	0.3	4.1	chr9	135819552	135819865	(2574852)	+	AluSx	SINE/Alu	1	302	(10)	4193662
884	25.6	11.6	0.0	chr9	135820004	135820277	(2574440)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	39	4193663
718	30.5	11.4	7.3	chr9	136316858	136317220	(2077497)	+	ERV3-16A3_I-int	LTR/ERVL	2726	3093	(2133)	4194255
183	29.3	6.2	3.9	chr9	136351981	136352058	(2042659)	+	MIR1_Amn	SINE/MIR	84	163	(67)	4194291
924	15.8	3.2	5.6	chr9	136694098	136694292	(1700425)	+	MER53	DNA/hAT	2	191	(2)	4194662
17	8.0	0.0	0.0	chr9	136694393	136694419	(1700298)	+	(GGGGT)n	Simple_repeat	1	27	(0)	4194663
285	29.6	8.8	5.9	chr9	136760739	136760820	(1633897)	C	L2c	LINE/L2	(145)	3230	3150	4194762
1326	25.7	5.0	13.1	chr9	136760821	136761260	(1633457)	+	MLT1C	LTR/ERVL-MaLR	2	412	(55)	4194763
2339	10.0	0.0	0.0	chr9	136761261	136761560	(1633157)	C	AluSp	SINE/Alu	(13)	300	1	4194764
12	6.4	5.3	7.5	chr9	136846902	136846939	(1547778)	+	(CCGCGC)n	Simple_repeat	1	40	(0)	4194872
20	21.8	5.4	4.1	chr9	136847354	136847445	(1547272)	+	(GCCCA)n	Simple_repeat	1	97	(0)	4194873
2113	15.7	0.0	0.3	chr9	136872238	136872549	(1522168)	+	AluJb	SINE/Alu	1	311	(1)	4194907
891	19.6	2.1	14.8	chr9	136872550	136872625	(1522092)	+	MER101-int	LTR/ERV1	2368	2414	(4225)	4194903
2122	10.2	3.4	0.0	chr9	136872626	136872909	(1521808)	C	AluSx	SINE/Alu	(18)	294	1	4194908
891	19.6	2.1	14.8	chr9	136872910	136873081	(1521636)	+	MER101-int	LTR/ERV1	2415	2574	(4065)	4194903
2549	6.4	0.0	1.0	chr9	137067491	137067802	(1326915)	+	AluSz	SINE/Alu	2	310	(2)	4195185
1293	7.7	0.7	3.3	chr9	137328572	137330657	(1064060)	+	(TACACGGGAC)n	Simple_repeat	1	2100	(0)	4195496
248	19.6	15.7	1.0	chr9	137330662	137330764	(1063953)	+	L1MEd	LINE/L1	1413	1533	(5553)	4195497
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
319	30.4	9.8	2.8	chr9	137580026	137580372	(814345)	+	MLT1C	LTR/ERVL-MaLR	2	463	(4)	4195815
12	16.9	4.8	7.7	chrX	3815886	3815947	(152224948)	+	(GGCCTGG)n	Simple_repeat	1	65	(0)	4365656
23	29.1	2.1	2.1	chrX	9717020	9717114	(146323781)	+	(CTCT)n	Simple_repeat	1	97	(0)	4375220
361	26.1	6.0	2.7	chrX	12771377	12771522	(143269373)	+	MamRep1879	DNA/hAT-Tip100?	66	216	(0)	4380077
1364	18.3	11.3	0.4	chrX	12771837	12772104	(143268791)	C	AluJb	SINE/Alu	(10)	302	2	4380078
2061	20.1	3.7	4.3	chrX	13921388	13921581	(142119314)	C	MER66B	LTR/ERV1	(27)	459	267	4381975
2325	8.8	0.0	1.0	chrX	13921582	13921876	(142119019)	C	AluSg	SINE/Alu	(18)	292	1	4381976
1051	28.6	9.1	5.3	chrX	17812280	17812828	(138228067)	C	Tigger16a	DNA/TcMar-Tigger	(29)	928	357	4388415
1100	15.7	1.1	0.0	chrX	18377652	18377823	(137663072)	+	AluJo	SINE/Alu	137	310	(2)	4389387
415	23.4	8.3	1.6	chrX	18377952	18378088	(137662807)	C	LTR50	LTR/ERVL	(506)	195	43	4389388
626	16.3	3.9	0.7	chrX	18378089	18378206	(137662689)	+	L1ME3B	LINE/L1	5483	5600	(642)	4389389
2278	11.5	0.0	1.0	chrX	18378212	18378516	(137662379)	+	AluSx	SINE/Alu	1	302	(10)	4389390
16	7.2	3.5	0.0	chrX	23334318	23334346	(132706549)	+	(GGGGA)n	Simple_repeat	1	30	(0)	4397354
718	7.6	11.8	0.0	chrX	23782210	23782314	(132258581)	+	HY1	scRNA	1	119	(0)	4398055
524	23.2	5.4	9.5	chrX	23782315	23782518	(132258377)	+	L1MEg	LINE/L1	1530	1714	(5372)	4398054
860	22.0	13.0	0.0	chrX	23782564	23782777	(132258118)	C	Charlie1	DNA/hAT-Charlie	(2535)	246	1	4398056
15	20.0	2.5	0.0	chrX	23783539	23783578	(132257317)	+	(CGCC)n	Simple_repeat	1	41	(0)	4398057
7435	21.1	2.3	3.0	chrX	26917483	26918974	(129121921)	+	L1PA17	LINE/L1	4	1484	(5389)	4403001
6574	27.8	5.5	6.1	chrX	28175682	28178912	(127861983)	C	L1PB4	LINE/L1	(3768)	3347	2	4404818
2404	5.5	0.0	3.4	chrX	30712706	30713033	(125327862)	C	AluY	SINE/Alu	(0)	311	1	4408676
691	26.4	10.0	4.6	chrX	30713034	30713098	(125327797)	C	L1MEi	LINE/L1	(1529)	683	628	4408674
749	26.7	6.0	6.0	chrX	30713182	30713464	(125327431)	C	L1MEi	LINE/L1	(1883)	329	47	4408674
715	26.9	6.0	6.6	chrX	39152003	39152304	(116888591)	C	AmnSINE1	SINE/5S-Deu-L2	(90)	485	186	4420071
17	0.0	3.6	3.5	chrX	40012490	40012517	(116028378)	+	(CGGCG)n	Simple_repeat	1	29	(0)	4421628
17	20.2	4.3	2.0	chrX	40012709	40012755	(116028140)	+	(AC)n	Simple_repeat	1	49	(0)	4421629
21	25.8	1.7	6.8	chrX	41473494	41473617	(114567278)	+	(GCCTGC)n	Simple_repeat	1	117	(0)	4424490
2915	10.3	12.8	0.4	chrX	41718691	41719169	(114321726)	C	LTR35A	LTR/ERV1	(0)	547	1	4424921
11164	12.9	2.5	1.2	chrX	42612183	42616331	(113424564)	C	L1PB1	LINE/L1	(2390)	4472	251	4426214
1763	19.3	0.3	1.4	chrX	44203594	44203889	(111837006)	C	AluJr	SINE/Alu	(19)	293	1	4428459
5597	17.4	2.5	5.4	chrX	44203890	44206263	(111834632)	+	L1PA17	LINE/L1	1185	3460	(3113)	4428458
796	26.5	19.9	4.2	chrX	44675312	44675736	(111365159)	+	MLT1H	LTR/ERVL-MaLR	27	534	(15)	4429447
878	21.7	9.5	3.4	chrX	48945570	48945809	(107095086)	+	MER46C	DNA/TcMar-Tigger	56	315	(23)	4437141
287	25.9	19.3	3.2	chrX	48946148	48946348	(107094547)	+	MIRb	SINE/MIR	1	246	(22)	4437143
630	21.9	19.0	2.0	chrX	49919532	49919731	(106121164)	C	MIR	SINE/MIR	(0)	262	21	4438585
284	28.9	8.2	3.6	chrX	49919916	49920055	(106120840)	C	MamRep1879	DNA/hAT-Tip100?	(37)	179	33	4438586
4232	19.7	5.1	0.8	chrX	50940831	50941707	(105099188)	+	MER68-int	LTR/ERVL	1128	2044	(946)	4440085
310	18.8	3.0	1.5	chrX	50941709	50941773	(105099122)	C	LTR28C	LTR/ERV1	(0)	1129	1064	4440087
3527	15.5	4.2	0.5	chrX	50941768	50942389	(105098506)	C	LTR28C	LTR/ERV1	(483)	646	1	4440087
2194	6.0	5.8	1.8	chrX	54422894	54423175	(101617720)	+	AluY	SINE/Alu	1	294	(17)	4445756
14	14.5	2.4	4.7	chrX	54423275	54423316	(101617579)	+	G-rich	Low_complexity	1	43	(0)	4445757
13	19.6	2.9	0.0	chrX	65407573	65407607	(90633288)	+	(GCC)n	Simple_repeat	1	36	(0)	4452292
13	18.2	0.0	0.0	chrX	65407890	65407920	(90632975)	+	G-rich	Low_complexity	1	31	(0)	4452293
606	30.9	9.8	6.3	chrX	68238098	68238674	(87802221)	C	L1M5	LINE/L1	(1119)	5027	4378	4455862
5036	13.1	0.2	9.3	chrX	68238675	68239553	(87801342)	C	LTR1A1	LTR/ERV1	(0)	799	1	4455863
19	18.8	6.5	1.5	chrX	69504963	69505024	(86535871)	+	(CGC)n	Simple_repeat	1	66	(0)	4458297
23	24.4	0.0	0.0	chrX	70097682	70097737	(85943158)	+	(CATT)n	Simple_repeat	1	56	(0)	4459103
594	27.1	6.6	0.6	chrX	70262725	70262928	(85777967)	+	MIR	SINE/MIR	32	258	(10)	4459395
13	5.2	0.0	0.0	chrX	70263141	70263160	(85777735)	+	(GCT)n	Simple_repeat	1	20	(0)	4459396
23	24.3	0.0	0.0	chrX	71759375	71759424	(84281471)	+	(CG)n	Simple_repeat	1	50	(0)	4462172
34	0.0	0.0	0.0	chrX	71759425	71759453	(84281442)	+	(CA)n	Simple_repeat	1	29	(0)	4462173
11408	26.1	1.6	1.4	chrX	74048882	74051399	(81989496)	+	L1PREC2	LINE/L1	1323	3850	(4305)	4465119
363	33.2	3.1	3.9	chrX	74216378	74216606	(81824289)	+	L2	LINE/L2	620	846	(2573)	4465275
1329	13.0	0.5	1.1	chrX	78103300	78103484	(77937411)	C	AluJo	SINE/Alu	(128)	184	1	4469503
329	25.1	10.1	0.0	chrX	78103485	78103596	(77937299)	+	MIR	SINE/MIR	102	232	(36)	4469504
7956	16.5	0.8	0.1	chrX	81291548	81292818	(74748077)	C	MSTA-int	LTR/ERVL-MaLR	(4)	1627	347	4472725
10832	12.0	1.5	0.2	chrX	86241055	86242663	(69798232)	+	MSTA-int	LTR/ERVL-MaLR	2	1630	(1)	4477888
22	19.1	2.8	4.1	chrX	100409953	100410023	(55630872)	+	(TGAGTG)n	Simple_repeat	1	73	(0)	4494261
16	29.0	0.0	0.0	chrX	100410216	100410265	(55630630)	+	(GCT)n	Simple_repeat	1	50	(0)	4494262
14	16.3	3.6	7.0	chrX	100410495	100410549	(55630346)	+	(CAGG)n	Simple_repeat	1	57	(0)	4494263
21455	12.6	2.6	1.8	chrX	101587665	101592186	(54448709)	C	L1PA13	LINE/L1	(380)	7218	2693	4496232
2229	11.7	0.7	0.0	chrX	103670234	103670531	(52370364)	C	AluSx	SINE/Alu	(12)	300	1	4498968
742	19.7	0.8	0.0	chrX	103670536	103670667	(52370228)	C	FLAM_A	SINE/Alu	(9)	133	1	4498969
652	23.9	8.5	9.7	chrX	103670668	103670744	(52370151)	C	L1MEi	LINE/L1	(319)	1893	1821	4498966
3249	27.9	2.5	5.0	chrX	104920809	104921942	(51118953)	+	L1PA15-16	LINE/L1	4	1108	(5827)	4500850
235	33.1	3.5	3.2	chrX	104922052	104922304	(51118591)	+	L1PA15-16	LINE/L1	1343	1596	(5323)	4500850
10259	19.2	2.0	2.6	chrX	104922336	104926063	(51114832)	+	L1PA15-16	LINE/L1	1471	5130	(1785)	4500850
6618	24.5	6.7	8.9	chrX	106862803	106864500	(49176395)	C	L1PA15	LINE/L1	(5022)	1667	4	4503267
1357	14.8	0.5	0.5	chrX	107537770	107537979	(48502916)	+	Tigger17c	DNA/TcMar-Tigger	1	210	(978)	4504344
592	32.4	1.9	2.4	chrX	107538008	107538219	(48502676)	+	MIRb	SINE/MIR	5	215	(53)	4504345
379	19.4	0.0	0.0	chrX	107538220	107538281	(48502614)	+	Tigger17b	DNA/TcMar-Tigger	991	1052	(21)	4504346
9984	14.3	3.0	0.5	chrX	107818416	107820006	(48220889)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	4504909
329	30.8	11.8	0.5	chrX	108139210	108139405	(47901490)	+	MIRb	SINE/MIR	40	260	(8)	4505355
2347	14.3	0.6	0.8	chrX	108139706	108140071	(47900824)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	4505356
17	18.4	0.0	0.0	chrX	109632992	109633022	(46407873)	+	A-rich	Low_complexity	1	31	(0)	4507109
750	3.2	0.0	1.1	chrX	109633197	109633290	(46407605)	C	L1PA6	LINE/L1	(8)	6146	6054	4507110
562	23.8	2.7	3.4	chrX	109633295	109633442	(46407453)	+	MIR	SINE/MIR	112	258	(4)	4507111
488	27.6	3.8	0.0	chrX	109891168	109891294	(46149601)	+	MER91A	DNA/hAT-Tip100	28	159	(37)	4507524
349	33.4	4.3	6.5	chrX	110413000	110413614	(45627281)	+	L2c	LINE/L2	201	801	(2618)	4508382
183	28.9	12.6	7.2	chrX	111164707	111164803	(44876092)	C	L2b	LINE/L2	(12)	3363	3261	4509433
845	21.8	3.1	6.5	chrX	111164954	111165154	(44875741)	+	MER20	DNA/hAT-Charlie	18	211	(8)	4509434
550	29.0	10.8	4.3	chrX	111165320	111165553	(44875342)	C	MIRb	SINE/MIR	(14)	254	4	4509435
28	25.0	0.0	0.0	chrX	112680126	112680186	(43360709)	+	(TG)n	Simple_repeat	1	61	(0)	4511742
17	24.4	0.0	0.0	chrX	112680188	112680226	(43360669)	+	(CG)n	Simple_repeat	1	39	(0)	4511743
5359	17.7	3.0	1.1	chrX	114161996	114162936	(41877959)	C	L1MA4A	LINE/L1	(5889)	960	1	4513764
18	7.6	0.0	0.0	chrX	114584534	114584561	(41456334)	+	(GCGCA)n	Simple_repeat	1	28	(0)	4514272
7519	16.7	0.3	0.2	chrX	114931813	114933001	(41107894)	C	MSTA-int	LTR/ERVL-MaLR	(1)	1630	440	4514702
9686	18.2	1.5	0.5	chrX	117742141	117745009	(38295886)	+	L1PA15-16	LINE/L1	4	2450	(4403)	4518109
17	16.2	3.9	3.7	chrX	119066875	119066926	(36973969)	+	GA-rich	Low_complexity	1	54	(0)	4520408
19	0.0	0.0	0.0	chrX	119067135	119067155	(36973740)	+	(A)n	Simple_repeat	1	21	(0)	4520409
17	29.7	0.0	0.0	chrX	119273351	119273404	(36767491)	+	(GCC)n	Simple_repeat	1	54	(0)	4520756
10809	8.4	0.3	10.4	chrX	119386394	119388149	(36652746)	C	LTR12C	LTR/ERV1	(0)	1579	3	4520953
1890	21.8	10.4	0.0	chrX	119516040	119516443	(36524452)	C	LTR16A	LTR/ERVL	(0)	451	1	4521223
379	30.5	6.1	2.0	chrX	119516491	119516694	(36524201)	C	L2c	LINE/L2	(1865)	1554	1342	4521215
595	27.0	8.7	0.0	chrX	119539939	119540116	(36500779)	C	Charlie17a	DNA/hAT-Charlie	(3)	214	20	4521278
591	16.8	25.9	5.3	chrX	119540142	119540386	(36500509)	+	MER5C	DNA/hAT-Charlie	1	313	(0)	4521279
2603	8.8	10.9	1.1	chrX	123777297	123777730	(32263165)	+	LTR7	LTR/ERV1	1	472	(0)	4527309
2592	3.9	0.0	0.7	chrX	123778081	123778386	(32262509)	C	AluY	SINE/Alu	(7)	304	1	4527310
5538	25.3	5.3	2.4	chrX	127861280	127863241	(28177654)	+	L1MA9	LINE/L1	1	2058	(4791)	4532734
15620	18.4	5.7	1.1	chrX	129346395	129348243	(26692652)	+	L1M1	LINE/L1	223	2197	(5368)	4534570
14	9.3	0.0	0.0	chrX	130120918	130120940	(25919955)	+	(AGG)n	Simple_repeat	1	23	(0)	4535994
286	21.5	0.0	3.0	chrX	130575830	130575896	(25464999)	C	Charlie4z	DNA/hAT-Charlie	(96)	71	7	4536765
2472	12.7	0.7	3.4	chrX	132922525	132922791	(23118104)	C	MER4E	LTR/ERV1	(0)	766	506	4540111
2163	12.2	0.0	0.0	chrX	132922792	132923085	(23117810)	+	AluSz6	SINE/Alu	12	305	(7)	4540112
1831	17.6	3.1	1.7	chrX	133215117	133215468	(22825427)	+	L1MB4	LINE/L1	5535	5891	(289)	4540541
1607	16.0	3.1	3.5	chrX	133215470	133215756	(22825139)	+	AluJb	SINE/Alu	1	286	(26)	4540542
360	13.1	1.1	1.6	chrX	133215765	133215832	(22825063)	C	L1M3	LINE/L1	(709)	5474	5408	4540543
14	14.6	0.0	3.1	chrX	133985348	133985379	(22055516)	+	(GGC)n	Simple_repeat	1	32	(0)	4541901
51	29.3	1.3	4.6	chrX	133985596	133985833	(22055062)	+	G-rich	Low_complexity	1	241	(0)	4541902
2771	12.3	0.2	1.7	chrX	134945700	134946114	(21094781)	+	MER4E	LTR/ERV1	358	766	(0)	4543688
18	21.6	2.1	0.0	chrX	135022461	135022508	(21018387)	+	(GCGCT)n	Simple_repeat	1	49	(0)	4543827
754	21.5	4.2	4.2	chrX	135022868	135023105	(21017790)	C	L1MC4a	LINE/L1	(303)	7579	7342	4543828
8720	5.2	0.6	0.5	chrX	135206317	135207322	(20833573)	+	LTR13	LTR/ERVK	1	1007	(0)	4544065
904	27.8	0.8	0.4	chrX	135931458	135931710	(20109185)	+	ERVL-B4-int	LTR/ERVL	1	254	(5460)	4545093
443	19.1	1.2	0.0	chrX	135931756	135931839	(20109056)	+	AluJb	SINE/Alu	121	205	(107)	4545086
1386	10.4	4.3	0.0	chrX	135931844	135932044	(20108851)	C	LTR13	LTR/ERVK	(0)	1007	798	4545094
2482	8.6	1.8	1.2	chrX	135932045	135932384	(20108511)	C	LTR13	LTR/ERVK	(664)	343	2	4545094
2479	10.1	0.0	0.0	chrX	136727534	136727830	(19313065)	C	AluSz	SINE/Alu	(12)	300	4	4546472
191	18.4	0.0	2.6	chrX	136727835	136727873	(19313022)	+	MER5A	DNA/hAT-Charlie	130	167	(22)	4546473
259	25.6	3.1	18.3	chrX	137051931	137052121	(18988774)	+	MIR	SINE/MIR	81	241	(21)	4547110
15	22.2	2.0	2.0	chrX	137574557	137574605	(18466290)	+	(CCCGCG)n	Simple_repeat	1	50	(0)	4547988
8259	19.9	2.8	0.9	chrX	138127819	138129374	(17911521)	C	L1P4a	LINE/L1	(4917)	1586	1	4548866
14	31.5	0.0	0.0	chrX	139203495	139203548	(16837347)	+	G-rich	Low_complexity	1	54	(0)	4550359
2297	10.5	0.7	0.0	chrX	139965762	139966066	(16074829)	+	AluSx1	SINE/Alu	6	312	(0)	4551470
1602	11.0	0.0	3.4	chrX	139966161	139966396	(16074499)	+	AluSx1	SINE/Alu	85	312	(0)	4551471
8530	11.9	2.2	0.1	chrX	140122288	140123678	(15917217)	C	L1PBa	LINE/L1	(4331)	2532	1113	4551742
1151	14.8	0.5	0.0	chrX	140123670	140123872	(15917023)	C	L1PBa	LINE/L1	(6659)	204	1	4551742
16135	15.5	3.1	0.8	chrX	140123883	140125146	(15915749)	C	L1MA2	LINE/L1	(4474)	3091	1772	4551741
33	32.6	0.8	0.8	chrX	140503969	140504095	(15536800)	+	(GGC)n	Simple_repeat	1	128	(0)	4552334
15	12.0	0.0	0.0	chrX	140504167	140504193	(15536702)	+	(CGG)n	Simple_repeat	1	27	(0)	4552335
28	18.4	0.0	3.1	chrX	140504317	140504381	(15536514)	+	(GGC)n	Simple_repeat	1	65	(0)	4552336
23	3.7	0.0	0.0	chrX	143634751	143634778	(12406117)	+	(TC)n	Simple_repeat	1	28	(0)	4556817
16	9.6	0.0	0.0	chrX	143634778	143634800	(12406095)	+	(CA)n	Simple_repeat	1	23	(0)	4556818
28	5.8	0.0	0.0	chrX	143635012	143635047	(12405848)	+	(GCAGGCGG)n	Simple_repeat	1	36	(0)	4556819
16	23.3	0.0	0.0	chrX	143635133	143635167	(12405728)	+	(C)n	Simple_repeat	1	35	(0)	4556820
185	31.6	3.7	13.2	chrX	151694450	151694631	(4346264)	C	MIRb	SINE/MIR	(44)	224	61	4567985
1121	11.9	0.0	0.6	chrX	153032541	153032699	(3008196)	C	AluJr	SINE/Alu	(17)	295	138	4569752
12	15.3	5.3	2.5	chrX	154370549	154370586	(1670309)	+	(CTGCCCA)n	Simple_repeat	1	40	(0)	4571754
13	13.2	0.0	0.0	chrX	154370687	154370711	(1670184)	+	(CCAG)n	Simple_repeat	1	25	(0)	4571755
1034	26.3	10.9	2.5	chrX	155048332	155049069	(991826)	C	L1M5	LINE/L1	(1170)	4976	4148	4572820
413	15.0	2.4	0.0	chrX	155049176	155049255	(991640)	+	LTR41B	LTR/ERVL	103	184	(574)	4572821
3367	19.9	4.3	3.0	chrX	155049350	155050313	(990582)	C	L1MD2	LINE/L1	(1256)	5288	4312	4572822
12891	21.1	2.7	1.3	chrX	155659445	155662553	(378342)	C	L1PB4	LINE/L1	(2400)	4515	1527	4573591
19	0.0	0.0	0.0	chrX	155662678	155662698	(378197)	+	(A)n	Simple_repeat	1	21	(0)	4573596
149	10.5	1.4	1.4	chrY	10664579	10664856	(46562559)	+	(CCATT)n	Simple_repeat	1	282	(0)	4587925
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1341	19.9	17.9	4.8	chrY	11197622	11198059	(46029356)	+	L1MB4	LINE/L1	5445	5967	(379)	4588952