17	12.8	2.9	0.0	chr1	1000024	1000057	(247956365)	+	G-rich	Low_complexity	1	35	(0)	1254
355	20.4	5.6	4.5	chr1	1365844	1365919	(247590503)	+	AluJb	SINE/Alu	135	213	(99)	1622
30	2.1	5.7	3.6	chr1	1366336	1366388	(247590034)	+	(GTGTGAATG)n	Simple_repeat	1	56	(0)	1627
140	18.5	0.7	0.0	chr1	4302955	4302983	(244653439)	+	(TTCCA)n	Simple_repeat	1	31	(0)	5121
64	6.2	1.1	1.1	chr1	4302984	4303071	(244653351)	+	(GTTCC)n	Simple_repeat	1	89	(0)	5122
140	18.5	0.7	0.0	chr1	4303072	4303312	(244653110)	+	(TTCCA)n	Simple_repeat	2	242	(0)	5123
203	26.6	2.0	5.3	chr1	7506406	7507273	(241449149)	+	(CACTCA)n	Simple_repeat	1	885	(0)	9916
298	33.6	3.2	5.6	chr1	13804015	13804175	(235152247)	+	MIRb	SINE/MIR	50	206	(62)	22054
1877	13.4	0.3	6.8	chr1	20693245	20693565	(228262857)	C	AluJr	SINE/Alu	(12)	300	1	36363
214	32.3	5.8	3.0	chr1	22878397	22878530	(226077892)	+	L2c	LINE/L2	3267	3406	(20)	41153
379	24.6	12.8	0.0	chr1	23790527	23790656	(225165766)	C	MIRc	SINE/MIR	(8)	260	112	43379
272	16.1	11.4	4.6	chr1	23790696	23790760	(225165662)	+	MIR3	SINE/MIR	109	178	(30)	43380
2018	13.6	0.7	1.9	chr1	24705041	24705348	(224251074)	C	AluJb	SINE/Alu	(8)	304	1	45518
373	23.2	10.7	0.5	chr1	24705760	24705905	(224250517)	+	MIRb	SINE/MIR	83	252	(16)	45519
628	18.3	4.0	3.4	chr1	24705955	24706101	(224250321)	+	MIR3	SINE/MIR	15	162	(46)	45520
15	13.4	0.0	10.0	chr1	27234576	27234625	(221721797)	+	(CGCAGG)n	Simple_repeat	1	50	(0)	51286
16	32.7	0.0	0.0	chr1	27234693	27234745	(221721677)	+	(GT)n	Simple_repeat	1	53	(0)	51287
2689	4.2	0.0	0.7	chr1	32963434	32963743	(215992679)	+	AluSx1	SINE/Alu	1	308	(4)	64112
251	33.1	3.6	4.6	chr1	40980446	40980641	(207975781)	C	MIRc	SINE/MIR	(22)	246	53	79992
450	32.5	9.3	4.1	chr1	42657596	42657910	(206298512)	C	L2a	LINE/L2	(339)	3080	2748	82916
417	17.1	14.6	2.8	chr1	42657959	42658066	(206298356)	C	L2a	LINE/L2	(17)	3409	3287	82917
1614	9.0	1.3	2.6	chr1	45486468	45486701	(203469721)	+	AluSx	SINE/Alu	78	308	(4)	88143
43	0.0	0.0	0.0	chr1	45486783	45486819	(203469603)	+	(AC)n	Simple_repeat	1	37	(0)	88144
364	26.5	9.1	1.7	chr1	55209182	55209354	(193747068)	C	Tigger15a	DNA/TcMar-Tigger	(16)	699	513	106633
411	28.5	8.3	10.3	chr1	55209454	55209821	(193746601)	C	Tigger15a	DNA/TcMar-Tigger	(339)	376	17	106633
2151	10.4	0.3	1.7	chr1	62136016	62136331	(186820091)	C	AluSp	SINE/Alu	(0)	313	1	119566
594	25.7	10.3	0.0	chr1	84103590	84103764	(164852658)	+	MLT1G	LTR/ERVL-MaLR	397	591	(0)	152069
15	21.1	0.0	0.0	chr1	84302773	84302810	(164653612)	+	A-rich	Low_complexity	1	38	(0)	152335
376	28.4	5.4	0.0	chr1	94045314	94045454	(154910968)	+	MIR	SINE/MIR	114	262	(0)	167204
1939	17.4	0.0	0.3	chr1	101257612	101257910	(147698512)	+	AluJb	SINE/Alu	1	298	(14)	177764
15	5.6	0.0	0.0	chr1	111593006	111593024	(137363398)	+	(AG)n	Simple_repeat	1	19	(0)	191763
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
858	18.6	1.9	0.0	chr1	144550034	144550189	(104406233)	C	AluJb	SINE/Alu	(14)	298	140	209602
339	21.1	1.3	1.3	chr1	144550208	144550284	(104406138)	+	MER4B-int	LTR/ERV1	5766	5842	(916)	209603
1324	11.0	0.9	12.6	chr1	144550320	144550618	(104405804)	C	AluSx	SINE/Alu	(0)	312	59	209604
321	6.4	8.1	1.1	chr1	154713961	154714648	(94241774)	+	(GT)n	Simple_repeat	1	744	(0)	226654
457	22.1	3.4	0.9	chr1	156065161	156065274	(92891148)	C	MIR	SINE/MIR	(70)	192	76	229413
277	32.1	3.1	6.2	chr1	156677642	156677835	(92278587)	+	MIRb	SINE/MIR	3	194	(74)	230550
16	18.9	0.0	0.0	chr1	167223427	167223456	(81732966)	+	(TG)n	Simple_repeat	1	30	(0)	246374
2048	7.2	5.8	4.6	chr1	167716307	167716611	(81239811)	C	AluSx1	SINE/Alu	(3)	309	1	247183
1688	4.9	0.0	3.5	chr1	169550129	169550359	(79406063)	C	L1PA5	LINE/L1	(0)	6154	5932	250097
2258	8.7	1.0	0.0	chr1	171782289	171782577	(77173845)	+	AluJo	SINE/Alu	1	292	(20)	253322
269	13.6	0.0	9.2	chr1	183149211	183149275	(65807147)	+	L4_C_Mam	LINE/RTE-X	5077	5135	(3)	270628
491	26.2	11.3	0.0	chr1	202018807	202018955	(46937467)	+	L2b	LINE/L2	3201	3368	(7)	297044
715	19.7	2.8	9.9	chr1	202019326	202019395	(46937027)	C	MER45A	DNA/hAT-Tip100	(0)	178	111	297045
2331	9.3	0.7	0.0	chr1	202019396	202019697	(46936725)	+	AluSq	SINE/Alu	1	304	(9)	297046
1203	21.9	10.0	0.9	chr1	202182322	202182648	(46773774)	C	MLT2D	LTR/ERVL	(52)	362	3	297448
15	4.5	17.4	0.0	chr1	202182666	202182711	(46773711)	+	(TCCCACCTTC)n	Simple_repeat	1	54	(0)	297450
455	13.8	6.0	5.0	chr1	202624116	202625415	(46331007)	+	(GT)n	Simple_repeat	1	1378	(0)	298201
1735	18.4	7.2	0.0	chr1	204309355	204309675	(44646747)	+	Tigger3a	DNA/TcMar-Tigger	1	346	(2)	301322
1011	15.7	6.4	2.5	chr1	205972783	205975447	(42980975)	+	(CA)n	Simple_repeat	1	2768	(0)	304363
1742	14.8	6.9	2.1	chr1	206449287	206449576	(42506846)	C	AluJb	SINE/Alu	(7)	305	1	305124
817	25.9	8.2	0.8	chr1	206449811	206450048	(42506374)	C	MIRb	SINE/MIR	(11)	257	1	305125
412	21.6	3.0	2.9	chr1	206923601	206924793	(42031629)	+	(GT)n	Simple_repeat	1	1229	(0)	305929
30	11.3	0.0	0.0	chr1	211620268	211620315	(37336107)	+	(CA)n	Simple_repeat	1	48	(0)	313062
2623	21.3	1.2	0.6	chr1	225480741	225481255	(23475167)	+	LTR53	LTR/ERVL	1	518	(1)	334039
26	6.3	0.0	7.0	chr1	226733146	226733202	(22223220)	+	(AAGTGTGAGC)n	Simple_repeat	1	57	(0)	336359
16	23.7	0.0	3.8	chr1	226733554	226733571	(22222851)	+	(ACCC)n	Simple_repeat	1	29	(24)	336360
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
2375	9.0	0.0	1.0	chr1	241782005	241782303	(7174119)	+	AluSc	SINE/Alu	1	296	(13)	359823
758	19.8	3.7	0.0	chr1	241847630	241847786	(7108636)	C	MER67A	LTR/ERV1	(0)	543	381	359940
5987	7.9	0.7	8.1	chr10	7299116	7300316	(126497106)	+	L1PA8A	LINE/L1	5021	6129	(2)	380799
13	5.2	0.0	0.0	chr10	68406167	68406186	(65391236)	+	(AAC)n	Simple_repeat	1	20	(0)	469129
569	3.2	0.0	0.0	chr10	68472182	68472243	(65325179)	C	AluYa5	SINE/Alu	(99)	212	151	469298
349	31.6	7.5	8.1	chr10	68472383	68472452	(65324970)	+	L2b	LINE/L2	1504	1564	(1855)	469299
24	0.0	2.8	5.4	chr10	97185997	97186032	(36611390)	+	(CA)n	Simple_repeat	1	37	(0)	517412
25	13.1	1.9	1.9	chr10	102114636	102114687	(31682735)	+	G-rich	Low_complexity	1	53	(0)	526318
19	20.2	1.6	4.8	chr10	102114740	102114806	(31682616)	+	(TCC)n	Simple_repeat	1	64	(0)	526319
19	19.2	0.0	0.0	chr10	102114877	102114918	(31682504)	+	(CACTCA)n	Simple_repeat	1	42	(0)	526320
21	23.5	1.5	2.9	chr10	102114921	102114997	(31682425)	+	(CTCC)n	Simple_repeat	1	75	(0)	526321
412	24.3	16.2	1.3	chr10	102964648	102964788	(30832634)	+	MIR	SINE/MIR	43	213	(55)	527959
2215	17.3	3.4	1.2	chr10	102964789	102965187	(30832235)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	527960
30	0.0	0.0	0.0	chr10	119253848	119253873	(14543549)	+	(GT)n	Simple_repeat	1	26	(0)	553558
598	15.8	0.0	0.0	chr10	122638008	122638102	(11159320)	+	MER81	DNA/hAT-Blackjack	20	114	(0)	559126
43	4.3	0.0	0.0	chr10	122638284	122638332	(11159090)	+	(TTCACACCCA)n	Simple_repeat	1	49	(0)	559127
1865	13.8	1.6	4.4	chr10	122638424	122638743	(11158679)	C	AluJo	SINE/Alu	(1)	311	1	559128
208	11.8	0.8	0.0	chr10	127003014	127003383	(6794039)	+	(GAACCTGTGT)n	Simple_repeat	1	373	(0)	565669
243	28.0	1.3	0.0	chr10	132234787	132234861	(1562561)	+	MLT1C	LTR/ERVL-MaLR	430	505	(0)	571439
2322	10.7	0.7	0.0	chr10	132235216	132235523	(1561899)	+	AluSx3	SINE/Alu	1	310	(1)	571440
101	23.0	6.5	5.3	chr10	132364294	132364784	(1432638)	+	(CACTCA)n	Simple_repeat	1	557	(29)	571577
13	23.5	0.0	0.0	chr10	132364785	132364819	(1432603)	+	(CCCA)n	Simple_repeat	1	35	(0)	571578
101	23.0	6.5	5.3	chr10	132364820	132364843	(1432579)	+	(CACTCA)n	Simple_repeat	558	586	(0)	571577
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
13	28.7	0.0	0.0	chr11	1017643	1017684	(134068938)	+	(TGG)n	Simple_repeat	1	42	(0)	574242
27	20.0	2.8	1.4	chr11	16606190	16606263	(118480359)	+	(TTTCTTT)n	Simple_repeat	1	75	(0)	597232
391	25.2	11.4	1.8	chr11	17352840	17353005	(117733617)	+	L1M5	LINE/L1	5344	5527	(667)	598616
238	26.7	2.6	1.3	chr11	17353221	17353296	(117733326)	+	L1ME5	LINE/L1	5983	6059	(135)	598617
269	4.3	9.5	1.2	chr11	61116374	61116910	(73969712)	+	(AC)n	Simple_repeat	1	588	(0)	659528
232	29.2	5.0	2.0	chr11	62679341	62679438	(72407184)	+	L1ME4c	LINE/L1	301	401	(429)	662552
787	25.5	1.5	3.5	chr11	64001840	64002042	(71084580)	+	MIRb	SINE/MIR	34	232	(36)	664831
2078	15.5	0.0	0.3	chr11	64331256	64331559	(70755063)	C	AluJo	SINE/Alu	(9)	303	1	665404
30	8.2	0.0	0.0	chr11	64331620	64331658	(70754964)	+	(GT)n	Simple_repeat	1	39	(0)	665405
24	32.9	0.0	1.2	chr11	64331663	64331747	(70754875)	+	(TG)n	Simple_repeat	1	85	(0)	665406
255	26.3	19.1	0.0	chr11	64331763	64331952	(70754670)	C	L2	LINE/L2	(348)	3071	2837	665407
346	35.4	9.5	4.8	chr11	85628901	85629232	(49457390)	+	L2c	LINE/L2	3020	3368	(19)	704115
260	25.4	15.6	0.6	chr11	85795016	85795145	(49291477)	+	MIR	SINE/MIR	81	238	(24)	704377
237	22.0	0.0	0.0	chr11	85795438	85795487	(49291135)	C	L2a	LINE/L2	(3)	3423	3374	704378
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
1833	12.9	3.0	0.0	chr12	2877899	2878184	(130397125)	+	AluJr	SINE/Alu	1	295	(17)	782825
283	31.6	11.5	9.5	chr12	2878185	2878935	(130396374)	C	L2b	LINE/L2	(145)	3242	2454	782824
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
508	11.4	0.0	0.0	chr12	49284665	49284734	(83990575)	C	AluSz6	SINE/Alu	(9)	303	234	846869
1764	15.0	0.0	0.0	chr12	49285012	49285265	(83990044)	+	AluJb	SINE/Alu	59	312	(0)	846870
24	19.3	0.0	0.0	chr12	68808591	68808643	(64466666)	+	(GGCTCGG)n	Simple_repeat	1	53	(0)	878136
2172	11.6	0.3	1.0	chr12	116414501	116414802	(16860507)	+	AluSz	SINE/Alu	2	301	(11)	957983
203	34.9	1.2	0.5	chr12	116414988	116415809	(16859500)	+	(GT)n	Simple_repeat	1	832	(0)	957984
27	7.7	5.5	0.0	chr12	121709888	121709942	(11565367)	+	(TAACACTTAG)n	Simple_repeat	1	58	(0)	970141
382	16.7	2.7	0.0	chr12	121709944	121710015	(11565294)	+	MLT1C	LTR/ERVL-MaLR	65	138	(329)	970142
430	18.8	0.0	0.0	chr12	121710016	121710100	(11565209)	C	AluJb	SINE/Alu	(6)	306	222	970143
3570	6.2	4.5	0.0	chr12	121710101	121710566	(11564743)	C	LTR14B	LTR/ERVK	(117)	491	4	970144
1136	26.4	7.7	1.0	chr12	122064182	122064568	(11210741)	+	MLT1K	LTR/ERVL-MaLR	145	559	(36)	971015
16	19.4	2.4	0.0	chr12	123366026	123366066	(9909243)	+	(ATAT)n	Simple_repeat	1	42	(0)	973887
2466	7.2	0.0	0.3	chr12	123366170	123366473	(9908836)	+	AluSx1	SINE/Alu	1	303	(9)	973888
195	28.4	6.9	2.4	chr12	124289085	124289167	(8986142)	C	MIRc	SINE/MIR	(169)	99	13	975845
212	37.1	8.8	6.3	chr12	124289186	124289548	(8985761)	+	Tigger19b	DNA/TcMar-Tigger	92	464	(86)	975846
211	25.0	2.4	2.4	chr12	130728206	130728864	(2546445)	+	(CACTCG)n	Simple_repeat	1	675	(0)	987117
1938	10.5	4.0	2.7	chr12	132711506	132711801	(563508)	+	AluJo	SINE/Alu	1	300	(12)	989827
389	21.6	12.9	0.0	chr12	132711813	132711960	(563349)	+	MER33	DNA/hAT-Charlie	155	324	(0)	989828
1071	34.2	1.1	0.8	chr13	28804889	28805248	(85559080)	+	LTR16E2	LTR/ERVL	7	367	(201)	1007356
421	20.1	2.7	3.2	chr13	28805331	28805453	(85558875)	C	SVA_F	Retroposon/SVA	(823)	552	457	1007357
443	28.6	4.8	8.0	chr13	28805450	28805688	(85558640)	+	LTR16E2	LTR/ERVL	338	568	(0)	1007356
391	28.4	6.1	1.2	chr13	30342243	30342413	(84021915)	C	MIRb	SINE/MIR	(82)	186	7	1009495
2456	4.9	0.7	3.3	chr13	49445647	49445952	(64918376)	+	AluSx1	SINE/Alu	1	298	(14)	1038414
230	19.4	3.1	11.4	chr13	75437801	75437870	(38926458)	C	MER135	DNA	(15)	213	150	1073325
593	14.3	5.9	3.1	chr13	78611304	78611401	(35752927)	+	AluJb	SINE/Alu	201	301	(11)	1077769
327	30.8	13.8	1.9	chr13	78611497	78611655	(35752673)	+	MIRb	SINE/MIR	20	200	(68)	1077770
1563	16.7	4.0	6.8	chr13	114226969	114227279	(137049)	+	AluJb	SINE/Alu	1	302	(10)	1125371
370	27.5	9.7	2.3	chr14	36820490	36820641	(70223077)	+	MIR3	SINE/MIR	3	159	(49)	1152098
222	22.1	4.1	3.9	chr14	68898874	68899657	(38144061)	+	(CCCACAC)n	Simple_repeat	1	816	(0)	1198448
11	18.9	5.8	6.8	chr14	76962137	76962144	(30081574)	+	(CTCACT)n	Simple_repeat	1	70	(0)	1213304
15	17.0	5.2	4.9	chr14	76962145	76962202	(30081516)	+	(TCACTT)n	Simple_repeat	1	61	(0)	1213305
621	31.9	8.4	3.4	chr14	76962286	76962610	(30081108)	C	L2c	LINE/L2	(0)	3387	3045	1213306
12	10.0	0.0	0.0	chr14	77034279	77034300	(30009418)	+	(GGAG)n	Simple_repeat	1	22	(0)	1213477
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
337	29.9	12.2	2.1	chr14	99546693	99546883	(7496835)	+	L1ME3Cz	LINE/L1	4818	5030	(1116)	1250181
136	34.8	1.6	2.2	chr14	105617401	105618033	(1425685)	+	(TCACA)n	Simple_repeat	1	643	(0)	1259898
305	18.9	2.1	9.5	chr14	105659757	105659861	(1383857)	+	LTR37A	LTR/ERV1	18	114	(312)	1259924
79	37.6	1.8	0.8	chr14	105761840	105762222	(1281496)	+	(CACAT)n	Simple_repeat	1	390	(0)	1260000
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
12	9.7	0.0	0.0	chr15	39920192	39920213	(62070976)	+	(GGGA)n	Simple_repeat	1	22	(0)	1290387
15	4.0	3.6	3.5	chr15	44538168	44538195	(57452994)	+	(TTG)n	Simple_repeat	1	29	(0)	1299122
324	30.0	10.4	3.7	chr15	70100887	70101073	(31890116)	C	MIRb	SINE/MIR	(20)	248	48	1341467
2167	22.4	5.0	1.6	chr15	73113443	73114004	(28877185)	+	MER119	DNA/hAT-Charlie	1	582	(1)	1346625
273	28.2	6.6	0.0	chr15	74540674	74540758	(27450431)	C	L2	LINE/L2	(2906)	513	423	1349045
32	0.0	0.0	0.0	chr15	74570463	74570497	(27420692)	+	(A)n	Simple_repeat	1	35	(0)	1349118
185	35.2	3.3	3.3	chr15	77699788	77699878	(24291311)	+	L2c	LINE/L2	3293	3383	(4)	1354494
430	17.1	6.3	2.8	chr15	80444332	80445558	(21545631)	+	(GT)n	Simple_repeat	1	1304	(0)	1359533
669	0.0	0.0	0.0	chr15	89335073	89335145	(12656044)	+	tRNA-Arg-CGA_	tRNA	1	73	(3)	1374041
1828	16.8	0.0	3.5	chr16	11958448	11958762	(78379583)	+	AluJr	SINE/Alu	1	304	(8)	1416910
431	19.5	7.1	3.3	chr16	11958798	11958919	(78379426)	C	MLT2E	LTR/ERVL	(1)	627	501	1416911
447	25.9	6.2	0.0	chr16	11958943	11959077	(78379268)	C	LTR33C	LTR/ERVL	(207)	422	279	1416912
1745	17.1	1.0	3.0	chr16	11959301	11959598	(78378747)	+	AluJr	SINE/Alu	2	293	(19)	1416913
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
13	16.5	0.0	0.0	chr16	28863250	28863276	(61475069)	+	(CCA)n	Simple_repeat	1	27	(0)	1454614
13	29.6	0.0	0.0	chr16	28863277	28863294	(61475051)	+	(CCCACC)n	Simple_repeat	2	46	(0)	1454615
26	0.0	0.0	0.0	chr16	28863894	28863918	(61474427)	+	(GCC)n	Simple_repeat	1	25	(0)	1454616
451	10.2	3.3	1.1	chr16	28946179	28946267	(61392078)	C	MER67C	LTR/ERV1	(0)	711	621	1454819
333	28.7	9.5	2.0	chr16	31327852	31328103	(59010242)	C	L2b	LINE/L2	(586)	2833	2561	1460095
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
377	20.6	0.0	0.0	chr16	34063794	34063861	(56274484)	+	AluYj4	SINE/Alu	224	291	(20)	1463563
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
133	13.0	2.3	2.9	chr16	57628843	57629108	(32709237)	+	(AGTGTG)n	Simple_repeat	1	272	(0)	1485455
227	24.5	0.0	0.0	chr16	57629311	57629363	(32708982)	C	MIR1_Amn	SINE/MIR	(82)	148	96	1485456
347	31.8	0.0	2.7	chr16	57629394	57629503	(32708842)	C	MIR1_Amn	SINE/MIR	(71)	159	53	1485457
1773	16.1	0.3	4.2	chr16	81722836	81723145	(8615200)	C	AluJr	SINE/Alu	(13)	299	2	1527855
590	18.8	6.6	6.6	chr16	81723281	81723417	(8614928)	C	MER91B	DNA/hAT-Tip100	(48)	142	6	1527856
726	24.5	3.7	0.9	chr16	84930163	84930372	(5407973)	+	MER6A	DNA/TcMar-Tigger	27	242	(363)	1533856
253	12.6	2.1	7.0	chr16	84930376	84931001	(5407344)	+	(GTGTGG)n	Simple_repeat	1	639	(0)	1533857
35	3.6	11.4	3.6	chr16	85589746	85589868	(4748477)	+	(TGAACTATGTG)n	Simple_repeat	1	137	(0)	1535106
216	33.4	0.0	3.9	chr16	85590762	85590863	(4747482)	+	MIRc	SINE/MIR	50	150	(118)	1535107
296	14.8	7.1	3.2	chr16	86932146	86932981	(3405364)	+	(AGGTGTG)n	Simple_repeat	1	895	(0)	1537495
41	11.0	5.1	0.0	chr16	88637313	88637391	(1700954)	+	(TCACACC)n	Simple_repeat	1	83	(0)	1540249
2391	8.4	0.0	0.7	chr16	88637435	88637742	(1700603)	+	AluY	SINE/Alu	1	306	(5)	1540250
17	15.3	0.0	2.6	chr16	89657993	89658030	(680315)	+	G-rich	Low_complexity	1	38	(0)	1541616
2430	8.1	0.7	0.0	chr17	2828059	2828366	(80429075)	+	AluSz	SINE/Alu	1	310	(2)	1550049
271	26.1	5.1	5.1	chr17	2828430	2828546	(80428895)	C	L2a	LINE/L2	(284)	3142	3026	1550047
2252	9.7	1.0	0.3	chr17	4215008	4215305	(79042136)	+	AluSx1	SINE/Alu	2	301	(11)	1552545
1024	16.8	2.9	11.4	chr17	9196866	9197093	(74060348)	+	MER63A	DNA/hAT-Blackjack	3	210	(0)	1562234
180	32.5	13.0	1.6	chr17	17881654	17881775	(65375666)	C	MIR3	SINE/MIR	(56)	152	15	1577510
231	14.7	0.0	0.0	chr17	18071079	18071112	(65186329)	+	MER5B	DNA/hAT-Charlie	126	159	(19)	1577877
249	29.4	0.0	1.2	chr17	18071259	18071344	(65186097)	+	MER65D	LTR/ERV1	263	347	(126)	1577878
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
2330	5.9	1.6	2.0	chr17	28721964	28722267	(54535174)	+	AluYm1	SINE/Alu	1	303	(8)	1589199
1434	11.3	0.0	0.0	chr17	28722283	28722476	(54534965)	C	AluSc	SINE/Alu	(115)	194	1	1589200
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
2122	11.7	0.0	0.0	chr17	35763615	35763897	(47493544)	+	AluSx	SINE/Alu	1	283	(29)	1602752
45	0.0	0.0	0.0	chr17	35763898	35763938	(47493503)	+	(AAAT)n	Simple_repeat	1	41	(0)	1602753
19	25.7	4.0	3.9	chr17	35764050	35764148	(47493293)	+	(GGACGA)n	Simple_repeat	1	103	(0)	1602754
191	37.5	0.3	1.3	chr17	41649666	41650574	(41606867)	+	(CA)n	Simple_repeat	1	912	(0)	1613959
54	0.0	0.0	0.0	chr17	43545935	43545980	(39711461)	+	(GT)n	Simple_repeat	1	46	(0)	1618071
549	22.0	2.2	2.9	chr17	43943763	43943898	(39313543)	+	MIRb	SINE/MIR	34	168	(100)	1618894
15	29.9	0.0	0.0	chr17	44138450	44138488	(39118953)	+	(CA)n	Simple_repeat	1	39	(0)	1619307
976	18.9	0.0	0.0	chr17	44138608	44138782	(39118659)	C	MER3	DNA/hAT-Charlie	(34)	175	1	1619308
2333	8.9	0.0	0.0	chr17	46116250	46116541	(37140900)	+	AluY	SINE/Alu	2	293	(18)	1623400
309	30.8	0.0	0.0	chr17	46876053	46876130	(36381311)	+	MER91A	DNA/hAT-Tip100	3	80	(116)	1624902
29	20.6	0.0	1.6	chr17	49678022	49678084	(33579357)	+	(AC)n	Simple_repeat	1	63	(0)	1630372
18	24.8	0.0	1.9	chr17	49678139	49678192	(33579249)	+	(CCCCT)n	Simple_repeat	1	54	(0)	1630373
15	32.9	0.0	0.0	chr17	57697415	57697463	(25559978)	+	(CT)n	Simple_repeat	1	49	(0)	1643658
292	31.7	1.1	4.7	chr17	59107090	59107281	(24150160)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	1646446
967	9.1	0.8	0.8	chr17	60036892	60037023	(23220418)	+	AluSp	SINE/Alu	81	212	(101)	1648463
3395	25.7	8.3	1.1	chr17	60037040	60038031	(23219410)	C	L1MD2	LINE/L1	(5514)	1126	54	1648461
105	16.0	8.4	3.8	chr17	74732462	74732828	(8524613)	+	(GT)n	Simple_repeat	1	398	(0)	1674731
94	18.9	6.7	3.4	chr17	74733314	74733640	(8523801)	+	(GT)n	Simple_repeat	1	349	(0)	1674732
1458	16.2	5.4	2.1	chr17	75206375	75206707	(8050734)	C	MER4CL34	LTR/ERV1	(0)	765	267	1675626
2459	4.3	0.0	3.3	chr17	75206708	75207006	(8050435)	C	AluY	SINE/Alu	(22)	289	1	1675627
293	24.7	0.6	0.1	chr17	76547631	76548316	(6709125)	+	(AC)n	Simple_repeat	1	690	(0)	1678251
2240	10.5	1.0	1.3	chr17	78385589	78385721	(4871720)	C	AluSx1	SINE/Alu	(176)	136	1	1681770
98	37.3	0.9	2.2	chr17	79138601	79139129	(4118312)	+	(CA)n	Simple_repeat	1	534	(0)	1683040
482	22.6	15.8	0.0	chr17	79868760	79868914	(3388527)	+	MER53	DNA/hAT	2	185	(8)	1684072
308	33.7	16.6	0.0	chr17	79869069	79869234	(3388207)	C	MIRb	SINE/MIR	(27)	241	43	1684073
368	28.7	7.5	3.7	chr17	80224480	80224633	(3032808)	C	MIRb	SINE/MIR	(3)	265	102	1684688
170	12.3	6.9	1.0	chr17	81742179	81742539	(1514902)	+	(CA)n	Simple_repeat	1	386	(0)	1686732
659	22.5	4.4	1.7	chr17	81792544	81793663	(1463778)	+	(CA)n	Simple_repeat	1	1175	(0)	1686733
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
200	2.8	7.2	2.7	chr18	4510685	4511029	(75862256)	+	(GTG)n	Simple_repeat	1	370	(0)	1696090
17	32.4	2.9	0.0	chr18	33578113	33578181	(46795104)	+	(GC)n	Simple_repeat	1	71	(0)	1730902
46	24.3	2.0	2.6	chr18	33578269	33578458	(46794827)	+	(CCGCCC)n	Simple_repeat	1	188	(0)	1730903
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
2859	16.1	6.1	1.1	chr18	52792954	52793481	(27579804)	C	LTR9	LTR/ERV1	(56)	556	1	1758955
19	10.4	4.7	2.2	chr18	75208549	75208591	(5164694)	+	G-rich	Low_complexity	1	45	(0)	1790756
18	11.2	5.6	5.3	chr18	75208759	75208812	(5164473)	+	(CGCGG)n	Simple_repeat	1	57	(0)	1790757
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
264	24.1	5.9	1.4	chr19	1189677	1189784	(57427832)	C	L2b	LINE/L2	(172)	3215	3102	1798364
2397	6.8	0.3	0.0	chr19	1189796	1190090	(57427526)	C	AluSq2	SINE/Alu	(15)	298	3	1798365
197	36.8	2.2	3.6	chr19	1246787	1246820	(57370796)	+	L2c	LINE/L2	3043	3077	(310)	1798457
2179	9.3	1.1	0.0	chr19	1246821	1247128	(57370488)	C	AluSp	SINE/Alu	(0)	313	1	1798458
1257	19.9	7.2	3.1	chr19	1886975	1887265	(56730351)	+	AluSx	SINE/Alu	1	304	(8)	1799673
193	19.4	0.0	0.0	chr19	1887299	1887334	(56730282)	C	L2a	LINE/L2	(259)	3167	3132	1799674
797	12.4	2.5	2.5	chr19	2059120	2059240	(56558376)	C	AluJb	SINE/Alu	(167)	145	25	1800054
331	31.5	2.6	2.6	chr19	2330415	2330572	(56287044)	C	L2c	LINE/L2	(257)	3130	2973	1800574
2229	9.0	0.0	0.7	chr19	4872411	4872724	(53744892)	C	AluY	SINE/Alu	(0)	311	1	1806733
25	9.2	0.0	0.0	chr19	6109004	6109038	(52508578)	+	(GT)n	Simple_repeat	1	35	(0)	1809423
12103	8.6	0.1	1.0	chr19	6600098	6601666	(52015950)	+	HERVE_a-int	LTR/ERV1	6292	7847	(0)	1810681
1004	3.3	0.0	0.0	chr19	6601667	6601787	(52015829)	+	LTR2	LTR/ERV1	1	121	(342)	1810681
1464	12.4	0.5	0.0	chr19	6601786	6602002	(52015614)	+	LTR2	LTR/ERV1	246	463	(0)	1810681
1574	14.3	4.8	7.6	chr19	9076041	9076217	(49541399)	C	AluJr	SINE/Alu	(20)	292	120	1816725
391	30.8	14.4	0.8	chr19	12965786	12965915	(45651701)	+	L2a	LINE/L2	3115	3268	(158)	1825651
1727	12.1	6.8	4.9	chr19	12965916	12966091	(45651525)	C	AluSz	SINE/Alu	(1)	311	144	1825652
2310	7.9	1.4	0.0	chr19	12966092	12966381	(45651235)	C	AluSp	SINE/Alu	(19)	294	1	1825653
41	0.0	4.4	0.0	chr19	13247700	13247744	(45369872)	+	(AAAT)n	Simple_repeat	1	47	(0)	1826241
1314	25.5	4.2	0.6	chr19	13247865	13248184	(45369432)	+	LTR16C	LTR/ERVL	158	489	(0)	1826242
2190	11.6	3.6	0.0	chr19	17836279	17836571	(40781045)	C	AluSx	SINE/Alu	(8)	304	1	1837399
255	35.5	7.2	2.7	chr19	17836578	17836762	(40780854)	+	L2c	LINE/L2	3026	3219	(168)	1837400
254	27.2	9.0	4.7	chr19	17836840	17836924	(40780692)	C	MIRc	SINE/MIR	(137)	131	43	1837401
13	7.0	6.2	2.9	chr19	17837088	17837121	(40780495)	+	G-rich	Low_complexity	1	35	(0)	1837402
2218	12.0	1.9	0.0	chr19	18272127	18272427	(40345189)	C	AluSq2	SINE/Alu	(6)	307	1	1838504
316	25.7	4.8	11.4	chr19	18272566	18272613	(40345003)	C	LTR41B	LTR/ERVL	(611)	147	114	1838500
2490	6.1	0.0	0.0	chr19	18272614	18272909	(40344707)	C	AluY	SINE/Alu	(15)	296	1	1838505
24	23.2	2.3	7.6	chr19	19385915	19385974	(39231642)	+	(CGCCGC)n	Simple_repeat	1	67	(55)	1840892
12	4.7	4.5	0.0	chr19	19385975	19385996	(39231620)	+	(GTCG)n	Simple_repeat	1	23	(0)	1840893
24	23.2	2.3	7.6	chr19	19385997	19386043	(39231573)	+	(CGCCGC)n	Simple_repeat	68	122	(0)	1840892
2278	9.3	0.0	0.0	chr19	36170440	36170729	(22446887)	C	AluSx1	SINE/Alu	(22)	290	1	1862024
354	23.5	3.4	12.2	chr19	36170730	36170798	(22446818)	C	MLT1F	LTR/ERVL-MaLR	(57)	491	430	1862023
25	34.7	0.0	0.0	chr19	38224430	38224568	(20393048)	+	(AC)n	Simple_repeat	1	139	(0)	1866146
891	20.6	5.5	0.0	chr19	38224788	38224968	(20392648)	+	MIR	SINE/MIR	37	228	(34)	1866147
2265	13.4	0.0	0.3	chr19	38881676	38881988	(19735628)	C	AluJb	SINE/Alu	(0)	312	1	1867658
1771	14.1	1.0	7.8	chr19	38881996	38882314	(19735302)	C	AluJo	SINE/Alu	(15)	297	1	1867659
272	29.1	13.0	1.5	chr19	42219825	42219960	(16397656)	C	MIRb	SINE/MIR	(18)	250	97	1874830
18	23.3	5.2	1.6	chr19	42283181	42283238	(16334378)	+	(TG)n	Simple_repeat	1	61	(0)	1874955
13	21.3	2.6	0.0	chr19	42283539	42283576	(16334040)	+	(AGTGTG)n	Simple_repeat	1	39	(0)	1874956
698	23.0	1.3	1.9	chr19	43528344	43528498	(15089118)	+	LTR65	LTR/ERV1	167	320	(349)	1877022
767	17.6	1.6	1.3	chr19	43528497	43528642	(15088974)	C	FLAM_C	SINE/Alu	(4)	298	10	1877023
537	20.4	11.0	1.8	chr19	43528656	43528820	(15088796)	+	LTR65	LTR/ERV1	313	494	(175)	1877022
1949	10.3	8.7	0.0	chr19	46785798	46786070	(11831546)	+	AluSz6	SINE/Alu	1	299	(13)	1884538
12	18.4	5.4	0.0	chr19	47021179	47021215	(11596401)	+	(GCCCCGG)n	Simple_repeat	1	39	(0)	1885084
13	22.2	5.6	1.8	chr19	47437053	47437106	(11180510)	+	(CCTCTC)n	Simple_repeat	1	57	(0)	1886157
36	30.1	3.1	1.8	chr19	47437134	47437201	(11180415)	+	(TC)n	Simple_repeat	1	68	(0)	1886158
2234	10.4	0.3	0.7	chr19	48490242	48490549	(10127067)	+	AluSz	SINE/Alu	1	307	(5)	1888864
335	25.8	18.9	10.4	chr19	48490550	48490621	(10126995)	+	MIR	SINE/MIR	147	211	(51)	1888863
16	9.8	0.0	0.0	chr2	3586189	3586210	(238607319)	+	(T)n	Simple_repeat	1	22	(0)	1914698
1863	13.8	5.9	0.7	chr2	11142714	11143003	(231050526)	C	AluJb	SINE/Alu	(6)	306	1	1926104
13	15.2	0.0	3.2	chr2	11143009	11143039	(231050490)	+	(ATTC)n	Simple_repeat	1	31	(0)	1926105
1244	25.0	5.9	9.8	chr2	11143044	11143575	(231049954)	+	L1ME3A	LINE/L1	5664	6173	(0)	1926091
662	14.2	7.8	1.4	chr2	20164657	20166296	(222027233)	+	(AC)n	Simple_repeat	1	1768	(0)	1939874
703	28.2	4.5	4.4	chr2	23312861	23313218	(218880311)	+	ERV3-16A3_I-int	LTR/ERVL	3183	3661	(2006)	1944213
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
519	29.1	4.2	1.3	chr2	84904554	84904783	(157288746)	+	X7B_LINE	LINE/CR1	1	237	(13)	2039633
16	18.9	0.0	0.0	chr2	84905056	84905085	(157288444)	+	(C)n	Simple_repeat	1	30	(0)	2039634
23	18.5	0.0	0.0	chr2	85133230	85133277	(157060252)	+	(GT)n	Simple_repeat	1	48	(0)	2040181
19	15.0	6.2	4.3	chr2	85133338	85133404	(157060125)	+	(CCTC)n	Simple_repeat	1	68	(0)	2040182
12	28.1	1.9	1.9	chr2	85133482	85133534	(157059995)	+	(GCCGG)n	Simple_repeat	1	54	(0)	2040183
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
313	22.6	2.2	5.2	chr2	127043707	127044768	(115148761)	+	(CACTCA)n	Simple_repeat	1	1085	(0)	2096803
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
20	20.6	0.0	0.0	chr2	167266513	167266557	(74926972)	+	(TGTG)n	Simple_repeat	1	45	(0)	2151996
345	30.8	8.9	3.7	chr2	168244431	168244673	(73948856)	+	UCON2	DNA?	124	380	(205)	2153268
613	21.2	11.1	4.7	chr2	172098202	172098394	(70095135)	C	MIRb	SINE/MIR	(3)	265	59	2159589
17	25.8	0.0	3.4	chr2	172099123	172099181	(70094348)	+	G-rich	Low_complexity	1	59	(0)	2159590
1889	26.3	8.0	3.2	chr2	174235384	174236564	(67956965)	+	L1MEc	LINE/L1	1147	2749	(1138)	2162913
17	22.8	0.0	0.0	chr2	176096831	176096866	(66096663)	+	GA-rich	Low_complexity	1	36	(0)	2165659
2234	8.4	1.0	1.0	chr2	208267503	208267800	(33925729)	C	AluSx	SINE/Alu	(8)	304	7	2211620
889	17.7	0.0	0.0	chr2	208267802	208267942	(33925587)	C	AluSx	SINE/Alu	(35)	277	137	2211621
966	25.0	14.3	0.9	chr2	216318317	216318761	(25874768)	C	L2a	LINE/L2	(41)	3385	2878	2222520
49	0.0	0.0	2.2	chr2	216692358	216692403	(25501126)	+	(GT)n	Simple_repeat	1	46	(0)	2223256
16	21.4	4.7	3.0	chr2	218010587	218010650	(24182879)	+	G-rich	Low_complexity	1	67	(0)	2225328
14	24.9	0.0	0.0	chr2	218010671	218010708	(24182821)	+	(GCG)n	Simple_repeat	1	38	(0)	2225329
289	26.3	4.8	4.8	chr2	222861911	222862014	(19331515)	C	MIRb	SINE/MIR	(87)	181	78	2233363
540	24.0	12.8	4.7	chr2	222862140	222862375	(19331154)	C	MIR	SINE/MIR	(3)	259	2	2233364
18	9.0	5.5	6.9	chr2	239159671	239159725	(3033804)	+	(CACACT)n	Simple_repeat	1	58	(0)	2258639
186	17.9	0.0	0.0	chr20	330603	330641	(64113526)	+	MIR3	SINE/MIR	81	119	(89)	2262676
2267	21.6	4.7	8.5	chr20	330952	331404	(64112763)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	248	2262677
1353	18.1	0.0	0.5	chr20	17971814	17972034	(46472133)	C	AluJr	SINE/Alu	(90)	222	3	2291821
233	22.3	13.9	7.1	chr20	19784574	19784713	(44659454)	+	L1MC4	LINE/L1	83	233	(5982)	2294623
234	28.4	3.6	2.2	chr20	19784872	19785008	(44659159)	+	L1MC4	LINE/L1	461	599	(5616)	2294623
434	26.6	13.0	1.8	chr20	19785229	19785275	(44658892)	+	L1MC4	LINE/L1	788	849	(5366)	2294623
706	27.1	2.1	3.7	chr20	29438792	29439477	(35004690)	C	BSR/Beta	Satellite	(62)	675	1	2304120
3508	14.7	1.8	3.6	chr20	29439448	29439822	(35004345)	C	LTR43	LTR/ERV1	(0)	602	221	2304121
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
363	22.5	2.2	1.7	chr20	31573376	31573489	(32870678)	+	MIR	SINE/MIR	30	146	(62)	2306295
1695	12.7	6.9	2.8	chr20	31573504	31573794	(32870373)	C	AluJb	SINE/Alu	(3)	309	6	2306296
264	29.7	1.0	2.9	chr20	31573799	31573902	(32870265)	+	MIR	SINE/MIR	65	166	(96)	2306297
18	0.0	0.0	0.0	chr20	31747770	31747789	(32696378)	+	(T)n	Simple_repeat	1	20	(0)	2306790
2227	10.2	0.0	3.8	chr20	32270101	32270413	(32173754)	+	AluSz	SINE/Alu	1	301	(11)	2308067
354	22.0	10.4	3.3	chr20	32270439	32270623	(32173544)	C	MIRc	SINE/MIR	(15)	253	38	2308068
182	29.0	9.3	2.7	chr20	34515487	34515596	(29928571)	C	MIR1_Amn	SINE/MIR	(78)	152	35	2313238
337	30.6	0.8	4.6	chr20	36460801	36460930	(27983237)	C	MIRb	SINE/MIR	(102)	166	42	2317682
588	30.4	11.1	10.2	chr20	47260279	47260917	(17183250)	+	L2a	LINE/L2	2773	3426	(0)	2339600
1236	23.8	5.0	3.1	chr20	57529488	57529950	(6914217)	+	MLT1B	LTR/ERVL-MaLR	14	467	(0)	2361350
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
797	22.4	0.5	0.1	chr21	8228115	8229742	(38480241)	+	(TCTC)n	Simple_repeat	1	1633	(0)	2373325
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
785	22.6	0.5	0.1	chr21	8455261	8456884	(38253099)	+	(TCTC)n	Simple_repeat	1	1629	(0)	2373669
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
342	35.4	4.7	0.0	chr21	9126682	9126862	(37583121)	+	L4_B_Mam	LINE/RTE-X	4232	4421	(520)	2374264
2188	10.9	1.3	0.0	chr21	9149811	9150104	(37559879)	C	AluSp	SINE/Alu	(15)	298	1	2374290
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
21	16.7	0.0	2.4	chr21	9819273	9819314	(36890669)	+	(AC)n	Simple_repeat	1	42	(0)	2374898
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
14	18.3	2.7	0.0	chr21	33686664	33686700	(13023283)	+	(TCACATT)n	Simple_repeat	1	38	(0)	2405451
2288	8.2	0.0	2.2	chr21	41783093	41783407	(4926576)	C	AluSx	SINE/Alu	(4)	308	1	2417995
2526	9.4	6.5	3.8	chr21	41783544	41783964	(4926019)	+	LTR3B	LTR/ERVK	1	433	(4)	2417996
33	7.1	4.9	1.6	chr21	44895862	44895923	(1814060)	+	(AAATA)n	Simple_repeat	1	64	(0)	2422293
253	29.0	11.6	0.0	chr21	44896135	44896241	(1813742)	C	MER63D	DNA/hAT-Blackjack	(705)	356	236	2422294
533	18.9	2.6	0.0	chr21	46134216	46134326	(575657)	C	MLT1C	LTR/ERVL-MaLR	(308)	159	46	2423538
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
530	23.4	6.1	1.9	chr22	11572555	11572711	(39245757)	+	MIRb	SINE/MIR	33	196	(72)	2425189
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
4341	4.4	0.2	0.0	chr22	18890645	18891207	(31927261)	C	HSATI	Satellite	(10)	567	4	2431162
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
322	24.6	4.3	2.9	chr22	19909288	19909426	(30909042)	+	L1ME3G	LINE/L1	5679	5798	(2084)	2432667
255	7.3	6.4	1.1	chr22	19909490	19910005	(30908463)	+	(AC)n	Simple_repeat	1	549	(0)	2432668
1949	15.8	2.6	0.0	chr22	19943366	19943669	(30874799)	+	AluJr	SINE/Alu	1	312	(0)	2432715
818	24.7	2.9	5.3	chr22	19943670	19943771	(30874697)	C	MER31-int	LTR/ERV1	(206)	4730	4638	2432714
1006	25.1	7.7	2.9	chr22	19943906	19944253	(30874215)	C	MER31-int	LTR/ERV1	(455)	4763	4398	2432716
4891	2.8	0.0	0.0	chr22	20337814	20338380	(30480088)	+	HSATI	Satellite	1	567	(10)	2433145
1153	11.0	0.7	0.0	chr22	20338381	20338535	(30479933)	+	AluYm1	SINE/Alu	13	168	(143)	2433146
51	2.3	11.4	0.0	chr22	20338573	20338660	(30479808)	+	(AT)n	Simple_repeat	1	98	(0)	2433147
210	20.6	0.5	0.7	chr22	24633505	24633942	(26184526)	+	(GT)n	Simple_repeat	1	440	(0)	2440381
252	28.9	10.2	6.1	chr22	30592487	30592514	(20225954)	+	MamRep4096	DNA/hAT-Tip100	101	130	(296)	2452962
2368	9.5	0.0	0.0	chr22	30592515	30592818	(20225650)	+	AluSx	SINE/Alu	1	304	(8)	2452963
12	21.7	0.0	0.0	chr22	35049289	35049320	(15769148)	+	G-rich	Low_complexity	1	32	(0)	2462154
30	3.5	0.0	0.0	chr22	37111140	37111169	(13707299)	+	(TG)n	Simple_repeat	1	30	(0)	2466531
231	33.9	7.1	2.5	chr22	37111670	37111790	(13706678)	+	MIR	SINE/MIR	24	150	(112)	2466532
28	3.3	0.0	0.0	chr22	37427363	37427393	(13391075)	+	(GTGTGA)n	Simple_repeat	1	31	(0)	2467204
14	28.6	5.1	1.2	chr22	37427395	37427435	(13391033)	+	(GCGTGT)n	Simple_repeat	1	80	(0)	2467205
16	23.3	0.0	0.0	chr22	37427436	37427470	(13390998)	+	(GT)n	Simple_repeat	1	35	(0)	2467206
17	20.6	4.0	0.0	chr22	37427473	37427522	(13390946)	+	(CGCCGC)n	Simple_repeat	1	52	(0)	2467207
18	15.1	4.3	2.0	chr22	37427584	37427630	(13390838)	+	(GTCC)n	Simple_repeat	1	49	(0)	2467208
14	17.9	6.8	0.0	chr22	37427685	37427728	(13390740)	+	(CGCA)n	Simple_repeat	1	47	(0)	2467209
19	26.7	1.6	3.1	chr22	38202654	38202725	(12615743)	+	(GT)n	Simple_repeat	1	70	(0)	2469024
196	25.9	1.4	0.2	chr22	38761591	38762101	(12056367)	+	(GT)n	Simple_repeat	1	518	(0)	2470220
13	17.5	3.0	0.0	chr22	40951788	40951820	(9866648)	+	G-rich	Low_complexity	1	34	(0)	2474736
223	20.4	11.5	0.0	chr22	42648590	42648643	(8169825)	+	MIR1_Amn	SINE/MIR	130	190	(40)	2478569
16	26.1	0.0	3.5	chr22	42649136	42649193	(8169275)	+	G-rich	Low_complexity	1	58	(0)	2478570
223	31.3	3.9	5.2	chr22	42945932	42946086	(7872382)	+	L2c	LINE/L2	2910	3062	(325)	2479233
485	28.7	3.5	0.0	chr22	42946123	42946289	(7872179)	+	ORSL-2b	DNA/hAT-Tip100	323	495	(13)	2479234
594	23.7	4.8	4.3	chr22	43320644	43320850	(7497618)	C	MIR	SINE/MIR	(5)	257	50	2479994
340	34.3	6.2	2.1	chr22	45887064	45887203	(4931265)	C	MIRb	SINE/MIR	(8)	260	115	2484697
86	22.2	6.5	5.7	chr22	50675414	50675908	(142560)	+	(CAGTGTG)n	Simple_repeat	1	527	(0)	2491078
18	25.1	1.9	1.8	chr3	51499927	51499980	(146795579)	+	(CA)n	Simple_repeat	1	55	(0)	2574460
16	13.2	0.0	9.8	chr3	113696289	113696339	(84599220)	+	(CCGCCC)n	Simple_repeat	1	51	(0)	2659586
18	20.7	4.2	4.0	chr3	113696340	113696359	(84599200)	+	(GCCGCCC)n	Simple_repeat	2	75	(0)	2659587
230	22.4	13.0	0.0	chr3	122383436	122383502	(75912057)	C	MIR3	SINE/MIR	(8)	200	124	2671933
674	20.4	16.5	0.4	chr3	126472482	126472735	(71822824)	C	MER106B	DNA/hAT-Charlie	(708)	351	57	2678635
188	28.0	10.3	5.4	chr3	129320566	129320731	(68974828)	+	MIR3	SINE/MIR	34	208	(0)	2683542
1875	10.4	6.0	5.7	chr3	136747124	136747290	(61548269)	+	AluSx	SINE/Alu	140	301	(11)	2694992
1750	14.8	4.7	1.7	chr3	136747407	136747696	(61547863)	+	AluJb	SINE/Alu	1	299	(13)	2694994
2486	6.1	0.3	0.3	chr3	136747778	136748074	(61547485)	C	AluY	SINE/Alu	(14)	297	1	2694995
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
1873	9.3	9.7	0.4	chr3	143008761	143009039	(55286520)	C	AluY	SINE/Alu	(3)	308	1	2705068
400	31.9	6.7	8.5	chr3	143009040	143009127	(55286432)	C	L1M5	LINE/L1	(1827)	4319	4236	2705067
24	23.2	3.4	3.3	chr3	150384631	150384718	(47910841)	+	(TTTTC)n	Simple_repeat	1	91	(0)	2715151
2739	19.0	6.4	0.0	chr3	160661503	160662013	(37633546)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	1	2730144
2538	26.8	7.1	6.0	chr3	160662014	160663826	(37631733)	+	L1ME3D	LINE/L1	4387	6234	(8)	2730143
19	18.9	0.0	0.0	chr3	170180134	170180169	(28115390)	+	A-rich	Low_complexity	1	36	(0)	2742507
1566	18.0	3.9	2.3	chr3	170180175	170180480	(28115079)	+	AluJo	SINE/Alu	1	311	(1)	2742508
428	25.4	10.8	3.4	chr3	177358979	177359157	(20936402)	C	MIRb	SINE/MIR	(70)	198	5	2753123
531	32.4	4.1	1.1	chr3	194474757	194475040	(3820519)	+	Kanga1	DNA/TcMar-Tc2	36	328	(1417)	2781173
3244	18.9	2.0	0.9	chr3	196500001	196500645	(1794914)	+	L1MB3	LINE/L1	5490	6141	(42)	2785170
2593	3.8	0.0	0.0	chr3	196500718	196501010	(1794549)	C	AluY	SINE/Alu	(18)	293	1	2785171
205	0.5	1.0	1.0	chr4	10001	10197	(190204358)	+	(ACCCTA)n	Simple_repeat	1	199	(0)	2788519
4151	15.9	5.9	18.2	chr4	10199	12822	(190201733)	C	TAR1	Satellite/telo	(238)	2302	1	2788520
765	19.7	0.0	6.0	chr4	855992	856142	(189358413)	C	AluJb	SINE/Alu	(24)	288	147	2789610
736	22.1	9.2	0.0	chr4	856726	856874	(189357681)	C	AluJb	SINE/Alu	(148)	164	1	2789610
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
406	18.9	2.2	0.5	chr4	49573746	49573848	(140640707)	+	MSTA	LTR/ERVL-MaLR	4	113	(262)	2865274
271	21.9	1.9	0.4	chr4	49573937	49574021	(140640534)	+	THE1D-int	LTR/ERVL-MaLR	959	1064	(587)	2865275
839	22.6	15.8	2.1	chr4	49573984	49574223	(140640332)	C	THE1D-int	LTR/ERVL-MaLR	(398)	1233	955	2865276
13	18.2	0.0	4.9	chr4	65670313	65670353	(124544202)	+	(GCTGAGG)n	Simple_repeat	1	41	(0)	2884662
1754	17.5	2.1	0.4	chr4	75637340	75637619	(114576936)	C	AluJb	SINE/Alu	(27)	285	1	2897763
13	12.2	3.7	0.0	chr4	86935280	86935306	(103279249)	+	(CCG)n	Simple_repeat	1	28	(0)	2914647
518	32.5	13.2	2.0	chr4	108134889	108135446	(82079109)	+	L3	LINE/CR1	3151	3780	(319)	2942994
13	17.4	4.9	2.3	chr4	151761141	151761181	(38453374)	+	GA-rich	Low_complexity	1	43	(0)	3001943
529	27.4	5.7	4.9	chr4	151761429	151761654	(38452901)	C	L2a	LINE/L2	(3)	3423	3172	3001944
13	21.2	2.1	4.2	chr4	167234067	167234113	(22980442)	+	(CCG)n	Simple_repeat	1	48	(0)	3023322
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
2304	8.9	0.3	0.7	chr5	270708	271011	(181267248)	C	AluSp	SINE/Alu	(10)	303	1	3055236
377	32.5	5.5	5.5	chr5	1157899	1158142	(180380117)	C	L1M5	LINE/L1	(1430)	4716	4469	3055996
403	24.3	1.9	5.6	chr5	10572269	10572429	(170965830)	+	MER5A1	DNA/hAT-Charlie	8	162	(4)	3067157
2170	11.1	3.0	0.0	chr5	16900742	16901030	(164637229)	C	AluSx1	SINE/Alu	(14)	298	1	3075738
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
4338	12.6	1.4	2.4	chr5	106535765	106535989	(75002270)	C	L1PA13	LINE/L1	(508)	5655	5437	3195260
13	19.2	3.9	3.8	chr5	134075510	134075560	(47462699)	+	(ACACTAT)n	Simple_repeat	1	53	(0)	3231897
1853	27.1	7.6	1.8	chr5	152612897	152613456	(28924803)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	1	3264037
856	30.0	3.5	3.2	chr5	154088385	154088725	(27449534)	+	LTR105_Mam	LTR/ERVL	49	390	(210)	3266395
315	27.8	8.7	1.7	chr5	154088760	154088876	(27449383)	+	LTR105_Mam	LTR/ERVL	475	600	(0)	3266395
454	7.0	11.2	1.4	chr5	154089059	154089130	(27449129)	C	MADE1	DNA/TcMar-Mariner	(0)	80	1	3266396
289	30.1	3.1	0.0	chr5	154089217	154089309	(27448950)	+	MLT1K	LTR/ERVL-MaLR	1	96	(499)	3266397
13	11.8	13.0	0.0	chr5	176541898	176541943	(4996316)	+	(CCAGAGCA)n	Simple_repeat	1	52	(0)	3305492
243	33.8	1.6	0.2	chr5	176542088	176542197	(4996062)	+	MIR	SINE/MIR	51	161	(101)	3305493
222	31.5	6.4	2.0	chr5	176542208	176542356	(4995903)	+	MIRb	SINE/MIR	21	176	(92)	3305494
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
323	26.3	4.1	10.6	chr5	180069211	180069342	(1468917)	+	L2a	LINE/L2	3299	3421	(5)	3312021
186	22.2	16.0	3.1	chr5	180069534	180069598	(1468661)	+	MamTip2	DNA/hAT-Tip100	77	151	(154)	3312022
307	27.0	6.7	2.8	chr5	180069618	180069794	(1468465)	C	MIRb	SINE/MIR	(7)	201	16	3312023
1720	16.4	0.7	0.0	chr6	1797006	1797297	(169008682)	+	MER1B	DNA/hAT-Charlie	1	294	(45)	3316589
308	32.1	8.2	6.2	chr6	2109278	2109456	(168696523)	C	L2a	LINE/L2	(225)	3201	3019	3316961
11	20.7	5.1	0.0	chr6	25992617	25992655	(144813324)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	3354452
788	0.0	0.0	0.0	chr6	27545689	27545770	(143260209)	+	tRNA-Ser-TCA_	tRNA	1	82	(3)	3357088
1686	19.9	7.0	4.2	chr6	28980932	28981360	(141824619)	+	LTR7C	LTR/ERV1	25	466	(5)	3359572
302	32.6	0.7	2.2	chr6	30326147	30326284	(140479695)	C	L2b	LINE/L2	(2)	3373	3238	3361433
546	23.4	17.9	0.5	chr6	33586146	33586338	(137219641)	C	MIR	SINE/MIR	(11)	251	18	3366782
798	10.1	4.6	3.9	chr6	33711185	33711313	(137094666)	C	AluJo	SINE/Alu	(182)	130	1	3367015
439	23.2	9.4	1.9	chr6	33711314	33711370	(137094609)	C	MER5B	DNA/hAT-Charlie	(115)	63	7	3367014
17	26.0	0.0	0.0	chr6	35218234	35218274	(135587705)	+	(GT)n	Simple_repeat	1	41	(0)	3369931
1069	6.2	0.0	0.0	chr6	36887112	36887241	(133918738)	C	AluYc	SINE/Alu	(9)	290	161	3373499
200	23.0	23.1	4.8	chr6	41964040	41964144	(128841835)	+	MIR	SINE/MIR	131	260	(2)	3382193
226	30.4	18.7	1.7	chr6	41964806	41965039	(128840940)	C	L2	LINE/L2	(668)	2751	2469	3382195
18	29.7	0.0	1.5	chr6	42782599	42782665	(128023314)	+	G-rich	Low_complexity	1	67	(0)	3384024
20	25.6	2.6	2.5	chr6	42782747	42782824	(128023155)	+	G-rich	Low_complexity	1	80	(0)	3384025
218	35.6	4.7	0.0	chr6	53545434	53545534	(117260445)	+	MIRb	SINE/MIR	2	107	(161)	3400327
842	23.3	3.1	1.1	chr6	68575864	68576052	(102229927)	C	LTR16A1	LTR/ERVL	(0)	456	264	3416837
872	14.3	7.2	0.0	chr6	68576053	68576220	(102229759)	+	MER1B	DNA/hAT-Charlie	1	181	(158)	3416838
289	13.3	0.0	9.1	chr6	68576253	68576318	(102229661)	+	MER1B	DNA/hAT-Charlie	263	322	(17)	3416839
195	32.8	0.0	4.3	chr6	88925661	88925730	(81880249)	C	MER5A	DNA/hAT-Charlie	(0)	189	123	3443795
1013	15.8	3.1	0.0	chr6	88925736	88925893	(81880086)	+	FAM	SINE/Alu	6	168	(17)	3443796
326	28.4	1.0	2.1	chr6	88925911	88926007	(81879972)	C	MER5A	DNA/hAT-Charlie	(71)	118	23	3443795
5519	24.6	9.1	3.9	chr6	97283623	97284483	(73521496)	+	L1M5	LINE/L1	2556	3506	(2640)	3454759
2114	4.8	0.7	17.6	chr6	116681988	116682344	(54123635)	+	AluY	SINE/Alu	4	299	(12)	3482937
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
16	0.0	0.0	0.0	chr6	124810918	124810934	(45995045)	+	(A)n	Simple_repeat	1	17	(0)	3493431
18	22.1	0.0	0.0	chr6	124961901	124961943	(45844036)	+	(GTGC)n	Simple_repeat	1	43	(0)	3493631
731	4.8	0.0	0.0	chr6	144216547	144216629	(26589350)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	3521045
15	21.8	2.9	0.0	chr6	144216902	144216935	(26589044)	+	(TC)n	Simple_repeat	1	35	(0)	3521046
358	36.1	3.5	3.5	chr6	168613828	168614343	(2191636)	+	TAR1	Satellite/telo	1035	1550	(561)	3555631
388	35.6	4.6	3.7	chr6	168614431	168615747	(2190232)	+	TAR1	Satellite/telo	1	1328	(552)	3555632
182	24.7	1.3	0.0	chr6	170452770	170453217	(352762)	+	(GT)n	Simple_repeat	1	454	(0)	3557445
734	25.1	5.6	0.5	chr7	524204	524423	(158821550)	+	MER33	DNA/hAT-Charlie	5	236	(88)	3558449
112	24.9	0.7	1.7	chr7	4083573	4083862	(155262111)	+	(CCTC)n	Simple_repeat	1	292	(0)	3564226
36	23.2	1.0	3.9	chr7	27152075	27152177	(132193796)	+	(GT)n	Simple_repeat	1	104	(0)	3598064
16	14.2	0.0	0.0	chr7	44922354	44922384	(114423589)	+	(TTCA)n	Simple_repeat	1	31	(0)	3625172
1061	22.5	5.3	2.9	chr7	44922423	44922653	(114423320)	+	MER33	DNA/hAT-Charlie	1	248	(76)	3625173
367	17.7	3.1	0.0	chr7	57495408	57495469	(101850504)	+	AluYj4	SINE/Alu	226	289	(22)	3642546
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
383	14.3	3.1	0.0	chr7	65489887	65489949	(93856024)	C	AluYj4	SINE/Alu	(22)	289	225	3647903
85	11.3	0.7	0.6	chr7	65489965	65490119	(93855854)	+	(TTCCA)n	Simple_repeat	1	156	(0)	3647904
48	19.0	0.9	2.6	chr7	65490120	65490168	(93855805)	+	(CTCCA)n	Simple_repeat	1	48	(0)	3647905
551	8.3	7.7	21.4	chr7	67268303	67268393	(92077580)	+	LTR49	LTR/ERV1	1	89	(506)	3651846
1984	13.8	1.4	0.0	chr7	74253443	74253731	(85092242)	+	AluSz	SINE/Alu	1	293	(19)	3666591
723	15.3	0.0	6.9	chr7	74253736	74253866	(85092107)	+	FLAM_A	SINE/Alu	2	123	(19)	3666592
13	20.9	3.8	3.6	chr7	88220048	88220100	(71125873)	+	(GCCCT)n	Simple_repeat	1	55	(0)	3688231
197	33.3	4.1	6.4	chr7	91940294	91940418	(67405555)	C	L2c	LINE/L2	(224)	3163	3042	3693105
495	31.6	6.8	1.7	chr7	92424736	92424970	(66921003)	+	L4_A_Mam	LINE/RTE-X	4740	4987	(3)	3693857
400	10.8	0.2	2.5	chr7	98810993	98811637	(60534336)	+	(TGG)n	Simple_repeat	1	646	(0)	3703453
6165	12.6	2.3	2.3	chr7	100217447	100218453	(59127520)	C	LTR13	LTR/ERVK	(0)	1007	1	3706084
2401	9.0	0.0	0.6	chr7	102618548	102618858	(56727115)	+	AluSq2	SINE/Alu	1	309	(4)	3711430
1229	18.0	6.4	1.3	chr7	102618861	102619158	(56726815)	+	L1MB2	LINE/L1	5817	6130	(41)	3711431
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
224	27.9	11.7	0.0	chr7	127651201	127651268	(31694705)	+	MIRb	SINE/MIR	186	262	(6)	3746051
287	30.8	13.8	6.6	chr7	132484945	132485125	(26860848)	+	Tigger19a	DNA/TcMar-Tigger	68	263	(60)	3754462
61	0.0	0.0	0.0	chr7	151875563	151875614	(7470359)	+	(GT)n	Simple_repeat	1	52	(0)	3784164
402	7.2	10.2	2.5	chr7	157298928	157299839	(2046134)	+	(TG)n	Simple_repeat	1	981	(0)	3792224
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
226	13.9	5.6	3.0	chr8	8646859	8647398	(136491238)	+	(AC)n	Simple_repeat	1	570	(0)	3805075
1081	24.5	16.6	0.2	chr8	11863717	11864150	(133274486)	+	L1ME3Cz	LINE/L1	166	684	(313)	3810283
1255	16.8	2.1	9.4	chr8	11864197	11864505	(133274131)	+	AluJb	SINE/Alu	11	296	(16)	3810284
1671	11.6	15.1	0.0	chr8	11864675	11864933	(133273703)	+	AluSz	SINE/Alu	1	305	(7)	3810285
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
388	21.7	7.1	1.9	chr8	65838686	65838845	(79299791)	C	Tigger15a	DNA/TcMar-Tigger	(295)	420	252	3886495
34	0.0	0.0	0.0	chr8	65841964	65841994	(79296642)	+	(GCC)n	Simple_repeat	1	31	(0)	3886499
16	5.5	10.0	2.3	chr8	65842097	65842164	(79296472)	+	(GCGCCCA)n	Simple_repeat	1	73	(0)	3886500
17576	17.9	5.1	5.0	chr8	89403725	89407969	(55730667)	+	HERV35I-int	LTR/ERV1	971	5987	(931)	3919768
587	23.9	5.5	2.6	chr8	96263423	96263595	(48875041)	+	MIRb	SINE/MIR	76	259	(3)	3930006
234	8.6	0.0	2.8	chr8	97764260	97764295	(47374341)	+	MER45R	DNA/hAT-Tip100	1	35	(1546)	3932384
719	25.6	0.0	3.5	chr8	97764674	97764843	(47373793)	+	MER45A	DNA/hAT-Tip100	15	178	(0)	3932385
2394	7.2	0.7	1.0	chr8	119833315	119833620	(25305016)	+	AluSz	SINE/Alu	1	305	(7)	3965454
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
293	19.1	0.0	0.0	chr8	144126225	144126287	(1012349)	+	L1MC4	LINE/L1	7955	8017	(25)	4007142
16	13.9	2.3	4.5	chr9	20622066	20622108	(117772609)	+	G-rich	Low_complexity	1	44	(0)	4038137
16	27.3	0.0	5.5	chr9	34587354	34587426	(103807291)	+	(AGTCTG)n	Simple_repeat	1	73	(0)	4057640
1219	8.5	0.0	2.4	chr9	37592779	37592942	(100801775)	+	AluSx	SINE/Alu	125	284	(28)	4062992
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
253	26.1	0.0	0.0	chr9	70038639	70038703	(68356014)	+	MER102a	DNA/hAT-Charlie	90	154	(176)	4082516
22	19.0	1.8	0.0	chr9	70402039	70402076	(67992641)	+	A-rich	Low_complexity	17	55	(0)	4083081
19	7.2	0.0	0.0	chr9	79571362	79571390	(58823327)	+	(CCA)n	Simple_repeat	1	29	(0)	4097445
14	10.8	3.1	3.0	chr9	79571404	79571435	(58823282)	+	(GCA)n	Simple_repeat	1	33	(0)	4097446
21	33.6	1.3	0.0	chr9	99821957	99822034	(38572683)	+	(CA)n	Simple_repeat	1	79	(0)	4129132
3966	16.5	2.3	2.4	chr9	111481531	111482133	(26912584)	+	L1MB3	LINE/L1	5584	6183	(0)	4147929
436	25.7	6.5	0.7	chr9	111482339	111482483	(26912234)	+	MIRc	SINE/MIR	99	252	(16)	4147931
20	32.4	0.0	2.6	chr9	126745472	126745548	(11649169)	+	(TCCC)n	Simple_repeat	1	77	(0)	4176938
2400	5.0	0.7	0.7	chr9	128655628	128655925	(9738792)	+	AluY	SINE/Alu	1	298	(13)	4181000
1842	13.3	1.0	1.9	chr9	128655933	128656240	(9738477)	+	AluJb	SINE/Alu	8	312	(0)	4181001
399	31.0	2.3	0.3	chr9	129339514	129340956	(9053761)	+	(GT)n	Simple_repeat	1	1476	(0)	4182600
345	28.8	3.7	2.4	chr9	129487829	129487963	(8906754)	+	MIR1_Amn	SINE/MIR	3	151	(79)	4182949
21	14.1	3.3	4.8	chr9	129488103	129488162	(8906555)	+	(CACACT)n	Simple_repeat	1	62	(0)	4182950
286	8.8	9.5	2.4	chr9	134182441	134183092	(4211625)	+	(TG)n	Simple_repeat	1	714	(0)	4191688
221	30.7	0.5	1.7	chr9	134279020	134279777	(4114940)	+	(CA)n	Simple_repeat	1	762	(0)	4191834
307	24.1	4.2	0.6	chr9	134946215	134947136	(3447581)	+	(AC)n	Simple_repeat	1	961	(0)	4192579
2209	12.1	0.7	0.0	chr9	137057399	137057705	(1337012)	C	AluSx1	SINE/Alu	(3)	309	1	4195160
275	15.2	1.7	0.0	chr9	137057708	137057766	(1336951)	C	Alu	SINE/Alu	(241)	60	1	4195161
1906	13.4	3.9	1.0	chr9	137057915	137058213	(1336504)	C	AluSx3	SINE/Alu	(3)	308	1	4195162
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
1801	26.2	8.7	7.2	chrX	53071275	53071735	(102969160)	C	MER20B	DNA/hAT-Charlie	(265)	518	6	4442993
90	33.8	2.5	1.4	chrX	53072231	53072382	(102968513)	+	(CT)n	Simple_repeat	1	154	(0)	4442996
31	0.0	2.9	2.8	chrX	53072383	53072417	(102968478)	+	(TC)n	Simple_repeat	1	36	(0)	4442997
90	33.8	2.5	1.4	chrX	53072418	53072695	(102968200)	+	(CT)n	Simple_repeat	1	282	(0)	4442998
18	22.1	0.0	2.3	chrX	69164591	69164634	(86876261)	+	(GT)n	Simple_repeat	1	44	(0)	4457673
285	26.8	15.7	0.0	chrX	100685428	100685524	(55355371)	C	MIRb	SINE/MIR	(153)	115	1	4494661
24905	5.5	2.1	3.8	chrX	101074148	101075972	(54964923)	+	HUERS-P1-int	LTR/ERV1	4456	6260	(3)	4495347
5483	6.7	0.6	1.7	chrX	101075973	101076508	(54964387)	+	LTR8	LTR/ERV1	1	535	(156)	4495347
403	35.0	10.7	6.8	chrX	106429738	106430424	(49610471)	+	L2c	LINE/L2	2657	3386	(1)	4502714
684	27.1	3.4	0.0	chrX	107748147	107748328	(48292567)	+	MIR3	SINE/MIR	19	201	(7)	4504750
15	28.9	0.0	0.0	chrX	119692506	119692547	(36348348)	+	(CA)n	Simple_repeat	1	42	(0)	4521590
13	18.4	0.0	0.0	chrX	137569217	137569247	(18471648)	+	G-rich	Low_complexity	1	31	(0)	4547985
220	28.7	3.3	4.4	chrX	153939388	153939478	(2101417)	+	L2a	LINE/L2	2319	2408	(1011)	4570973
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
328	20.6	3.1	0.0	chrY	10686758	10686820	(46540595)	C	FRAM	SINE/Alu	(13)	153	89	4587996
6112	24.5	0.6	0.4	chrY	10925266	10926566	(46300849)	+	(TTCCA)n	Simple_repeat	4	1309	(0)	4588455
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
471	23.6	1.6	5.4	chrY	11281810	11281939	(45945476)	C	MER21C	LTR/ERVL	(645)	223	99	4589057
338	21.0	6.9	0.0	chrY	11281975	11282055	(45945360)	C	MER21C	LTR/ERVL	(822)	116	30	4589057
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
10957	28.2	0.5	0.1	chrY	26653859	26659290	(30568125)	+	(AATGG)n	Simple_repeat	5	5454	(0)	4607165