3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
482	21.1	15.7	2.9	chr1	182024	182194	(248774228)	C	L1MC5a	LINE/L1	(2382)	395	199	270
2006	12.9	0.4	0.4	chr1	788085	788363	(248168059)	+	AluSp	SINE/Alu	1	279	(34)	1022
38	16.5	0.0	2.7	chr1	788365	788438	(248167984)	+	GA-rich	Low_complexity	1	74	(0)	1023
12	21.7	0.0	0.0	chr1	788434	788465	(248167957)	+	(GAAC)n	Simple_repeat	1	32	(0)	1024
384	23.8	3.3	7.7	chr1	888086	888264	(248068158)	C	L1M4	LINE/L1	(2554)	3586	3416	1125
80	36.0	1.3	3.1	chr1	888310	888696	(248067726)	+	A-rich	Low_complexity	1	392	(0)	1126
6359	25.8	8.3	5.8	chr1	1098912	1099077	(247857345)	C	L1ME2	LINE/L1	(3476)	2845	2677	1341
303	26.5	4.6	0.0	chr1	1099079	1099161	(247857261)	C	L1MD	LINE/L1	(3569)	2577	2491	1350
255	24.4	1.3	0.6	chr1	1099209	1099304	(247857118)	C	L1ME2	LINE/L1	(3550)	2771	2677	1341
236	22.3	4.1	2.1	chr1	1099286	1099381	(247857041)	C	L1ME2	LINE/L1	(3547)	2774	2677	1341
261	21.7	3.2	1.1	chr1	1099440	1099532	(247856890)	C	L1ME2	LINE/L1	(3550)	2771	2677	1341
245	21.4	5.3	0.0	chr1	1099525	1099613	(247856809)	C	L1MD	LINE/L1	(3556)	2590	2497	1351
253	18.2	4.3	0.0	chr1	1099602	1099667	(247856755)	C	L1MD	LINE/L1	(3556)	2590	2522	1352
332	18.6	3.0	2.0	chr1	1099671	1099769	(247856653)	C	L1MD	LINE/L1	(3550)	2596	2497	1351
295	18.8	5.2	3.5	chr1	1099752	1099936	(247856486)	C	L1ME2	LINE/L1	(3530)	2791	2660	1341
513	21.8	0.0	6.8	chr1	1099947	1100108	(247856314)	+	FLAM_C	SINE/Alu	7	212	(90)	1353
209	33.3	8.6	0.0	chr1	1175646	1175756	(247780666)	C	MIR	SINE/MIR	(22)	246	123	1436
130	13.9	1.3	1.3	chr1	2401197	2401429	(246554993)	+	(CCTCCCT)n	Simple_repeat	1	236	(0)	3193
164	20.7	3.3	1.0	chr1	3016313	3016710	(245939712)	+	G-rich	Low_complexity	1	411	(0)	3669
103	24.2	3.0	0.4	chr1	3351525	3351795	(245604627)	+	(TCTC)n	Simple_repeat	1	279	(0)	3933
485	31.5	7.7	2.8	chr1	3759890	3760137	(245196285)	C	MLT1K	LTR/ERVL-MaLR	(66)	529	269	4316
349	14.4	11.0	4.0	chr1	3760223	3760323	(245196099)	C	L1MC4	LINE/L1	(16)	8026	7918	4317
17	16.9	2.9	0.0	chr1	3760325	3760358	(245196064)	+	(CT)n	Simple_repeat	1	35	(0)	4318
1155	20.6	4.5	0.9	chr1	3760361	3760683	(245195739)	C	L1MEg	LINE/L1	(2983)	3690	3356	4307
168	24.8	3.6	1.5	chr1	4049678	4050180	(244906242)	+	GA-rich	Low_complexity	1	521	(0)	4762
12	7.8	7.4	0.0	chr1	4050182	4050208	(244906214)	+	(GTGG)n	Simple_repeat	1	29	(0)	4763
942	20.5	6.7	3.5	chr1	4983870	4984199	(243972223)	C	MER31B	LTR/ERV1	(0)	514	7	6070
1000	20.8	0.5	4.1	chr1	5224806	5225026	(243731396)	C	L1MB5	LINE/L1	(6)	6168	5956	6434
2285	17.1	4.4	5.4	chr1	5225027	5225233	(243731189)	+	MLT2B2	LTR/ERVL	1	224	(291)	6435
105	1.0	0.0	0.0	chr1	5225234	5225330	(243731092)	+	(CTCTCTCCCT)n	Simple_repeat	1	97	(0)	6436
2285	17.1	4.4	5.4	chr1	5225331	5225585	(243730837)	+	MLT2B2	LTR/ERVL	225	457	(58)	6435
124	23.4	3.7	3.3	chr1	5747515	5747921	(243208501)	+	GA-rich	Low_complexity	1	422	(0)	7207
613	30.7	5.7	1.8	chr1	5747922	5748140	(243208282)	+	MIRb	SINE/MIR	23	250	(18)	7208
2758	23.8	5.8	3.0	chr1	7400876	7401828	(241554594)	C	L1ME1	LINE/L1	(2709)	5286	4304	9797
186	32.3	2.9	5.7	chr1	7401956	7402060	(241554362)	+	MIRc	SINE/MIR	85	186	(82)	9809
1808	9.4	3.7	5.0	chr1	9077461	9077737	(239878685)	+	AluSq2	SINE/Alu	3	275	(38)	12900
43	17.7	0.0	2.2	chr1	9077738	9077827	(239878595)	+	G-rich	Low_complexity	1	90	(0)	12901
4124	11.5	1.8	0.5	chr1	9077842	9078453	(239877969)	C	MER41B	LTR/ERV1	(14)	620	1	12902
130	24.2	0.7	0.7	chr1	9768885	9769190	(239187232)	+	GA-rich	Low_complexity	1	308	(0)	14333
1894	24.0	6.5	3.2	chr1	9769275	9769760	(239186662)	+	L1MB7	LINE/L1	5627	6141	(43)	14334
46	0.0	0.0	0.0	chr1	10865779	10865820	(238090602)	+	(GACA)n	Simple_repeat	1	42	(0)	16490
27	29.9	1.5	9.7	chr1	10865898	10866161	(238090261)	+	A-rich	Low_complexity	1	268	(0)	16491
42	24.6	9.9	1.7	chr1	10865899	10866160	(238090262)	+	GA-rich	Low_complexity	1	288	(0)	16492
206	20.0	1.8	2.6	chr1	12644779	12645370	(236311052)	+	(CTTC)n	Simple_repeat	1	587	(0)	20163
202	32.0	0.0	2.5	chr1	12645374	12645453	(236310969)	C	L2c	LINE/L2	(11)	3376	3299	20164
614	21.0	9.0	6.3	chr1	16517243	16517559	(232438863)	C	MER31B	LTR/ERV1	(21)	445	1	27683
1031	16.8	1.5	5.3	chr1	16517578	16517732	(232438690)	C	MER89	LTR/ERV1	(2)	557	408	27684
2001	11.7	0.7	1.1	chr1	16517733	16518053	(232438369)	+	AluY	SINE/Alu	1	311	(0)	27685
2026	11.0	0.0	0.0	chr1	17479249	17479511	(231476911)	+	AluSx1	SINE/Alu	50	312	(0)	29505
438	16.3	14.4	1.9	chr1	17479538	17479661	(231476761)	C	MER31B	LTR/ERV1	(7)	507	317	29506
2460	18.6	1.2	9.8	chr1	17479671	17479846	(231476576)	C	MER34A1	LTR/ERV1	(14)	573	409	29507
304	27.0	11.6	0.0	chr1	17689184	17689320	(231267102)	+	MIRb	SINE/MIR	40	194	(74)	29994
66	24.0	4.1	1.0	chr1	17689446	17689640	(231266782)	+	(TCCT)n	Simple_repeat	1	203	(0)	29995
147	22.7	1.3	0.0	chr1	18020546	18020862	(230935560)	+	(TC)n	Simple_repeat	1	321	(0)	30756
47	0.0	0.0	0.0	chr1	18020866	18020905	(230935517)	+	(AC)n	Simple_repeat	1	40	(0)	30757
2686	17.3	5.9	0.4	chr1	18792278	18792805	(230163617)	+	MER89	LTR/ERV1	1	559	(0)	32426
572	27.5	2.6	5.4	chr1	18792806	18792933	(230163489)	C	L2c	LINE/L2	(281)	3106	2984	32424
2769	10.5	0.3	0.0	chr1	18832319	18832681	(230123741)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	32518
87	23.9	6.5	0.3	chr1	18832682	18832893	(230123529)	+	(TC)n	Simple_repeat	1	226	(0)	32519
709	32.0	5.6	6.8	chr1	18832898	18833369	(230123053)	+	L2c	LINE/L2	2922	3387	(0)	32515
187	29.6	2.7	1.4	chr1	19030097	19030168	(229926254)	+	L2b	LINE/L2	3289	3361	(14)	32960
45	37.5	3.0	2.9	chr1	19030175	19030390	(229926032)	+	GA-rich	Low_complexity	1	213	(0)	32961
1929	13.1	0.7	0.4	chr1	19030391	19030665	(229925757)	+	AluSx	SINE/Alu	14	289	(23)	32962
41	29.5	2.5	5.0	chr1	22342488	22342722	(226613700)	+	(AGAGAC)n	Simple_repeat	1	241	(0)	39943
416	24.4	2.4	1.3	chr1	22547048	22548201	(226408221)	+	(TC)n	Simple_repeat	1	1182	(0)	40364
252	37.1	7.6	1.0	chr1	22599378	22599573	(226356849)	+	Charlie15a	DNA/hAT-Charlie	1	210	(14)	40467
355	17.9	6.0	3.7	chr1	22599574	22600382	(226356040)	+	GA-rich	Low_complexity	1	827	(0)	40468
404	27.1	0.0	4.0	chr1	23103506	23103605	(225852817)	C	L3	LINE/CR1	(92)	4007	3912	41604
405	24.6	9.8	5.2	chr1	23103613	23103805	(225852617)	+	L2a	LINE/L2	3212	3414	(12)	41605
96	8.0	0.7	0.0	chr1	23103810	23103944	(225852478)	+	(GGGA)n	Simple_repeat	1	136	(0)	41606
2222	11.2	0.3	1.6	chr1	23104171	23104483	(225851939)	C	AluSz	SINE/Alu	(3)	309	1	41607
11	21.7	0.0	2.9	chr1	23980380	23980414	(224976008)	+	(CTCCAC)n	Simple_repeat	1	35	(0)	43830
1979	15.3	2.6	0.0	chr1	25108401	25108701	(223847721)	+	AluJb	SINE/Alu	3	311	(1)	46389
76	14.9	2.0	6.0	chr1	25108704	25108898	(223847524)	+	GA-rich	Low_complexity	1	199	(0)	46390
143	13.4	0.4	0.0	chr1	25166774	25167001	(223789421)	+	(GGAA)n	Simple_repeat	1	229	(0)	46514
287	31.0	9.2	0.0	chr1	25167002	25167130	(223789292)	+	L1ME4b	LINE/L1	715	856	(36)	46515
235	25.2	6.8	4.7	chr1	25167139	25167267	(223789155)	+	L1ME3Cz	LINE/L1	866	997	(0)	46516
21	15.3	1.8	5.2	chr1	27603927	27603983	(221352439)	+	(TCCC)n	Simple_repeat	1	58	(0)	52103
19	22.0	6.9	4.8	chr1	27604061	27604176	(221352246)	+	(CCTCGC)n	Simple_repeat	1	124	(0)	52104
46	0.0	0.0	0.0	chr1	27916597	27916635	(221039787)	+	(TG)n	Simple_repeat	1	39	(0)	52836
530	11.9	0.0	6.0	chr1	27916636	27916684	(221039738)	C	AluJo	SINE/Alu	(30)	282	234	52834
130	16.2	9.0	3.2	chr1	27916705	27917159	(221039263)	+	(TCCT)n	Simple_repeat	1	496	(0)	52837
2511	8.4	0.0	0.0	chr1	28123073	28123380	(220833042)	+	AluY	SINE/Alu	2	309	(2)	53306
745	18.6	4.6	6.4	chr1	28123381	28123473	(220832949)	C	FRAM	SINE/Alu	(83)	93	1	53305
636	25.1	8.0	2.1	chr1	28123480	28123666	(220832756)	C	L2b	LINE/L2	(592)	2827	2629	53290
1954	11.4	4.5	0.0	chr1	28506188	28506484	(220449938)	C	AluSx	SINE/Alu	(1)	311	1	54374
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
1364	10.8	1.6	0.0	chr1	28649101	28649286	(220307136)	C	AluSc	SINE/Alu	(120)	189	1	54783
1491	16.6	5.7	8.2	chr1	28649355	28649386	(220307036)	+	L1M4	LINE/L1	4963	4993	(1153)	54784
1826	28.6	7.5	0.9	chr1	29603494	29604175	(219352247)	+	L2	LINE/L2	1675	2405	(1014)	56934
21	30.9	2.1	2.1	chr1	29604190	29604205	(219352217)	+	(TTCT)n	Simple_repeat	1	36	(59)	56935
14	23.4	1.9	3.6	chr1	29604206	29604259	(219352163)	+	(TTTCTGC)n	Simple_repeat	1	55	(0)	56936
21	30.9	2.1	2.1	chr1	29604260	29604282	(219352140)	+	(TTCT)n	Simple_repeat	37	95	(0)	56935
3205	14.8	3.2	0.9	chr1	29875536	29876081	(219080341)	+	MER89	LTR/ERV1	1	559	(0)	57427
5683	16.6	4.6	11.3	chr1	29876082	29876335	(219080087)	+	L1MDb	LINE/L1	5593	5842	(777)	57423
40	25.6	2.3	2.9	chr1	32025645	32025777	(216930645)	+	(CTTC)n	Simple_repeat	1	136	(0)	61902
1493	16.5	0.0	4.4	chr1	32025782	32025927	(216930495)	C	AluJr	SINE/Alu	(52)	260	123	61903
31	0.0	0.0	0.0	chr1	32025928	32025956	(216930466)	+	(TATT)n	Simple_repeat	1	29	(0)	61904
2187	9.2	0.7	5.7	chr1	32865054	32865096	(216091326)	+	AluSg	SINE/Alu	1	26	(284)	63909
639	24.6	10.7	4.1	chr1	32972186	32972495	(215983927)	C	L2a	LINE/L2	(0)	3426	3154	64133
12	11.1	0.0	8.6	chr1	32973105	32973139	(215983283)	+	(GCCCCC)n	Simple_repeat	1	35	(0)	64134
12	16.5	0.0	0.0	chr1	32973206	32973232	(215983190)	+	G-rich	Low_complexity	1	27	(0)	64135
22	12.8	0.0	0.0	chr1	32973436	32973469	(215982953)	+	(T)n	Simple_repeat	1	34	(0)	64136
6293	8.6	2.1	15.4	chr1	32973471	32975836	(215980586)	C	SVA_E	Retroposon/SVA	(0)	1382	50	64137
370	23.4	6.7	2.5	chr1	35021940	35022097	(213934325)	+	Charlie18a	DNA/hAT-Charlie	178	342	(0)	67862
460	23.1	1.8	0.0	chr1	35022160	35022267	(213934155)	C	MIRc	SINE/MIR	(116)	152	43	67863
192	25.7	22.1	1.9	chr1	37235956	37236110	(211720312)	+	L2a	LINE/L2	2451	2645	(774)	72324
720	21.3	7.6	4.2	chr1	37236200	37236504	(211719918)	C	MER31B	LTR/ERV1	(33)	433	1	72325
765	15.5	21.4	0.8	chr1	37429311	37429559	(211526863)	+	MSTB	LTR/ERVL-MaLR	1	307	(158)	72711
1073	17.3	2.2	2.6	chr1	37429877	37430107	(211526315)	+	MSTB1	LTR/ERVL-MaLR	203	432	(0)	72712
890	19.9	8.7	7.3	chr1	37441909	37442238	(211514184)	+	LTR37B	LTR/ERV1	134	468	(0)	72739
292	23.4	0.9	0.1	chr1	37442350	37443025	(211513397)	+	(CTCT)n	Simple_repeat	1	682	(0)	72740
912	14.7	6.2	2.5	chr1	37445912	37446078	(211510344)	+	THE1D	LTR/ERVL-MaLR	35	209	(172)	72745
1229	13.0	0.1	2.1	chr1	37446218	37446422	(211510000)	+	THE1D	LTR/ERVL-MaLR	177	381	(0)	72745
202	21.7	1.3	3.4	chr1	38267534	38268061	(210688361)	+	(TCCC)n	Simple_repeat	1	535	(0)	74396
514	30.2	18.0	0.8	chr1	38268110	38268366	(210688056)	C	L2c	LINE/L2	(47)	3340	3030	74397
755	29.6	5.7	11.7	chr1	40458389	40458512	(208497910)	C	MLT1J2	LTR/ERVL-MaLR	(7)	441	348	78846
2381	12.4	0.0	1.0	chr1	40458513	40458819	(208497603)	C	AluSz6	SINE/Alu	(8)	304	1	78847
2005	13.9	0.3	7.1	chr1	40485897	40486220	(208470202)	C	AluSz	SINE/Alu	(5)	307	6	78903
1014	25.8	10.4	12.0	chr1	40486221	40486356	(208470066)	C	L1MEf	LINE/L1	(986)	1670	1539	78899
61	12.3	0.0	1.0	chr1	40486370	40486470	(208469952)	+	(CTCC)n	Simple_repeat	1	101	(0)	78904
618	23.7	14.6	0.9	chr1	40486472	40486504	(208469918)	C	L1MEf	LINE/L1	(5059)	1141	1110	78905
1569	15.3	0.0	1.4	chr1	40486507	40486721	(208469701)	C	AluJo	SINE/Alu	(100)	212	1	78906
7046	11.3	1.9	2.0	chr1	41249031	41249835	(207706587)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(0)	1068	264	80426
1841	15.0	0.0	2.0	chr1	41249836	41250135	(207706287)	C	AluJo	SINE/Alu	(8)	304	11	80427
1686	19.1	0.0	8.8	chr1	43740505	43740844	(205215578)	+	AluJr4	SINE/Alu	2	311	(1)	84830
44	24.1	1.6	1.6	chr1	43740851	43740971	(205215451)	+	GA-rich	Low_complexity	1	123	(0)	84831
2001	14.5	0.0	3.4	chr1	43741045	43741341	(205215081)	+	AluJo	SINE/Alu	1	287	(25)	84832
30	21.0	0.0	0.0	chr1	44405166	44405226	(204551196)	+	(TG)n	Simple_repeat	1	61	(0)	85972
29	19.0	0.0	3.0	chr1	44405366	44405438	(204550984)	+	(GCC)n	Simple_repeat	1	70	(0)	85973
16	14.2	0.0	0.0	chr1	44405661	44405691	(204550731)	+	(GGACTG)n	Simple_repeat	1	31	(0)	85974
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
849	21.8	1.1	1.7	chr1	45139182	45139360	(203817062)	C	AluJb	SINE/Alu	(15)	297	120	87409
53	14.9	4.0	0.0	chr1	45139375	45139474	(203816948)	+	(TC)n	Simple_repeat	1	104	(0)	87410
597	19.3	4.8	8.2	chr1	45139475	45139645	(203816777)	C	AluJo	SINE/Alu	(11)	301	137	87411
21	15.2	3.8	1.8	chr1	45139646	45139703	(203816719)	+	(TTTTC)n	Simple_repeat	1	59	(0)	87412
927	14.9	0.0	0.0	chr1	45139704	45139837	(203816585)	C	FLAM_C	SINE/Alu	(8)	135	2	87413
1906	12.3	18.2	2.8	chr1	45266083	45266586	(203689836)	C	LTR18B	LTR/ERVL	(27)	587	1	87629
334	22.6	7.0	2.8	chr1	45266686	45266794	(203689628)	+	MLT1F	LTR/ERVL-MaLR	406	519	(23)	87630
6162	11.8	2.8	2.1	chr1	45819341	45820361	(203136061)	+	L1M1	LINE/L1	5537	6565	(1000)	88850
419	29.9	4.9	5.3	chr1	45957924	45958167	(202998255)	C	L2a	LINE/L2	(2932)	487	245	89092
398	31.5	8.3	4.4	chr1	45958230	45958720	(202997702)	+	L2a	LINE/L2	2907	3426	(0)	89098
18	21.4	3.9	3.8	chr1	47338475	47338513	(201617909)	+	(TTTTTC)n	Simple_repeat	1	38	(0)	91379
58	8.2	0.0	0.0	chr1	47338514	47338592	(201617830)	+	(TCCC)n	Simple_repeat	1	79	(0)	91380
18	21.4	3.9	3.8	chr1	47338593	47338629	(201617793)	+	(TTTTTC)n	Simple_repeat	3	40	(0)	91381
27	5.5	0.0	2.5	chr1	47997482	47997521	(200958901)	+	(GGGCC)n	Simple_repeat	1	40	(0)	92701
23	15.8	2.0	0.0	chr1	47997587	47997635	(200958787)	+	(CGCT)n	Simple_repeat	1	50	(0)	92702
20	14.5	0.0	5.9	chr1	47997697	47997748	(200958674)	+	(CCTCC)n	Simple_repeat	1	48	(0)	92703
1696	27.0	7.9	3.9	chr1	50527487	50527811	(198428611)	C	Charlie25	DNA/hAT-Charlie	(1219)	1305	978	96965
72	5.3	0.0	0.0	chr1	50527812	50527890	(198428532)	+	(TC)n	Simple_repeat	1	79	(0)	96966
1890	13.4	3.5	1.8	chr1	50527891	50528167	(198428255)	C	AluJb	SINE/Alu	(30)	282	1	96967
1634	10.2	14.4	1.5	chr1	51054755	51055019	(197901403)	+	AluSx1	SINE/Alu	1	305	(7)	97857
11024	17.6	6.2	7.5	chr1	51055020	51055238	(197901184)	C	L1M4	LINE/L1	(2986)	3856	3734	97854
2343	11.2	0.3	0.3	chr1	51055239	51055549	(197900873)	C	AluSz	SINE/Alu	(1)	311	1	97858
2477	24.7	2.0	6.4	chr1	51058676	51058968	(197897454)	C	L1M4	LINE/L1	(4943)	1827	1488	97854
6154	19.3	8.2	21.3	chr1	51058969	51061016	(197895406)	+	MER52A	LTR/ERV1	1	1755	(0)	97864
259	26.7	9.4	5.6	chr1	51648707	51648849	(197307573)	+	MIR1_Amn	SINE/MIR	68	216	(14)	99177
186	33.8	1.9	7.9	chr1	51648938	51649101	(197307321)	+	L2	LINE/L2	2796	2949	(470)	99178
302	37.0	8.1	4.0	chr1	51666715	51667068	(197289354)	C	L2	LINE/L2	(446)	2973	2604	99222
1660	17.1	1.2	1.8	chr1	51667198	51667524	(197288898)	C	L1MB8	LINE/L1	(6)	6172	5848	99223
38	0.0	0.0	0.0	chr1	53327840	53327874	(195628548)	+	(GCA)n	Simple_repeat	1	35	(0)	102874
18	2.8	10.5	2.4	chr1	53327915	53327968	(195628454)	+	(GCC)n	Simple_repeat	1	58	(0)	102875
27	8.2	0.0	0.0	chr1	53328007	53328045	(195628377)	+	(GCC)n	Simple_repeat	1	39	(0)	102875
1633	18.8	5.5	3.1	chr1	54926152	54926507	(194029915)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	106167
608	18.2	2.2	2.2	chr1	54926508	54926567	(194029855)	+	LTR50	LTR/ERVL	76	134	(661)	106166
107	7.8	3.6	0.6	chr1	54926582	54926746	(194029676)	+	(GA)n	Simple_repeat	1	171	(0)	106168
699	25.4	12.7	0.4	chr1	54926747	54927133	(194029289)	+	LTR50	LTR/ERVL	220	754	(41)	106166
1374	27.1	4.4	8.0	chr1	55327078	55327626	(193628796)	+	LTR78	LTR/ERV1	777	1304	(0)	106884
41	20.5	4.1	0.0	chr1	55327711	55327807	(193628615)	+	GA-rich	Low_complexity	1	101	(0)	106885
2374	8.8	0.0	0.0	chr1	55327967	55328261	(193628161)	+	AluSg	SINE/Alu	3	297	(13)	106886
1147	22.1	8.6	6.1	chr1	55561436	55561830	(193394592)	+	MLT1C	LTR/ERVL-MaLR	10	415	(52)	107344
26285	4.9	0.2	0.0	chr1	55561831	55567969	(193388453)	C	L1PA4	LINE/L1	(2)	6153	3	107345
312	26.6	10.7	8.4	chr1	56431004	56431122	(192525300)	C	MLT1J	LTR/ERVL-MaLR	(97)	415	294	108804
23	9.2	5.9	5.6	chr1	56431158	56431201	(192525221)	+	GA-rich	Low_complexity	1	43	(0)	108805
51	3.7	0.0	0.0	chr1	56431202	56431256	(192525166)	+	(GGAG)n	Simple_repeat	1	55	(0)	108806
23	9.2	5.9	5.6	chr1	56431257	56431279	(192525143)	+	GA-rich	Low_complexity	44	67	(0)	108807
480	29.0	5.8	0.0	chr1	56431354	56431515	(192524907)	C	MLT1J	LTR/ERVL-MaLR	(340)	172	1	108804
52	21.0	0.0	2.5	chr1	56863822	56863941	(192092481)	+	(TCCC)n	Simple_repeat	1	120	(0)	109656
521	36.6	3.7	5.9	chr1	56863945	56864249	(192092173)	C	L2b	LINE/L2	(5)	3370	3073	109657
2599	6.4	0.0	0.6	chr1	57635814	57636126	(191320296)	+	AluYk4	SINE/Alu	1	311	(0)	111227
1409	21.0	3.3	10.7	chr1	57636127	57636388	(191320034)	+	MLT1B	LTR/ERVL-MaLR	162	390	(0)	111225
1476	26.6	6.7	5.0	chr1	57636405	57636965	(191319457)	C	L2a	LINE/L2	(554)	2865	2295	111224
1225	15.9	1.9	1.4	chr1	57999543	57999753	(190956669)	+	MER20	DNA/hAT-Charlie	8	219	(0)	111959
40	29.7	6.9	0.9	chr1	57999797	58000000	(190956422)	+	GA-rich	Low_complexity	1	218	(0)	111960
36	16.3	1.4	0.0	chr1	58000003	58000072	(190956350)	+	G-rich	Low_complexity	1	71	(0)	111961
31	22.8	0.0	0.0	chr1	58250427	58250496	(190705926)	+	(GCAGCA)n	Simple_repeat	1	70	(0)	112475
285	34.4	4.1	1.4	chr1	59212330	59212544	(189743878)	C	L2b	LINE/L2	(207)	3168	2948	114443
695	23.4	6.4	3.9	chr1	59421107	59421439	(189534983)	+	L1MC5	LINE/L1	8810	9151	(153)	114838
771	27.3	4.7	7.1	chr1	60786197	60786405	(188170017)	C	MER89-int	LTR/ERV1	(6593)	208	3	117102
1685	22.6	1.0	2.8	chr1	60786410	60786875	(188169547)	C	MER89	LTR/ERV1	(2)	557	1	117102
618	24.0	14.5	0.9	chr1	60933897	60934118	(188022304)	C	MIRb	SINE/MIR	(10)	252	4	117371
30	14.7	0.0	0.0	chr1	60936465	60936518	(188019904)	+	(GAGA)n	Simple_repeat	1	54	(0)	117377
27	19.4	3.1	0.0	chr1	61077349	61077413	(187879009)	+	(AGCG)n	Simple_repeat	1	67	(0)	117645
41	24.9	2.5	0.0	chr1	61082191	61082308	(187874114)	+	(GAGC)n	Simple_repeat	1	121	(0)	117647
16	18.9	0.0	0.0	chr1	61082351	61082380	(187874042)	+	(C)n	Simple_repeat	1	30	(0)	117648
22	19.3	6.8	4.5	chr1	61082380	61082482	(187873940)	+	(CGCGG)n	Simple_repeat	1	110	(0)	117649
62	5.8	0.0	0.0	chr1	61393239	61393311	(187563111)	+	(CTCTCT)n	Simple_repeat	1	73	(0)	118077
991	32.5	1.5	4.2	chr1	61393344	61393767	(187562655)	C	MLT1K	LTR/ERVL-MaLR	(177)	418	7	118078
78	6.6	3.6	0.0	chr1	61588982	61589093	(187367329)	+	(TC)n	Simple_repeat	1	116	(0)	118399
34086	5.6	0.8	0.8	chr1	62754825	62760515	(186195907)	+	HERV9NC-int	LTR/ERV1	1	5187	(931)	120771
22	20.2	7.4	1.1	chr1	63523647	63523727	(185432695)	+	(TCTCTG)n	Simple_repeat	1	87	(0)	122201
15	5.6	0.0	0.0	chr1	64215820	64215838	(184740584)	+	(CT)n	Simple_repeat	1	19	(0)	123494
2755	25.0	6.8	7.5	chr1	64421436	64422682	(184533740)	C	MLT1A-int	LTR/ERVL-MaLR	(13)	1358	5	123855
1693	19.7	1.1	7.7	chr1	64422687	64423087	(184533335)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	123855
440	27.9	3.6	2.2	chr1	65264372	65264509	(183691913)	+	L2b	LINE/L2	3258	3386	(1)	125459
11	34.8	0.0	0.0	chr1	65449571	65449624	(183506798)	+	(TGGAGC)n	Simple_repeat	1	54	(0)	125818
2970	14.0	4.2	0.9	chr1	65449673	65450242	(183506180)	C	L1MCa	LINE/L1	(2910)	3411	2822	125815
23831	7.7	0.7	0.8	chr1	65462003	65468172	(183488250)	C	L1PA6	LINE/L1	(11)	6316	178	125830
236	35.3	5.2	0.5	chr1	65667396	65667580	(183288842)	C	L1MA9	LINE/L1	(5309)	2257	2064	126105
36	26.7	1.0	0.0	chr1	66123470	66123567	(182832855)	+	(CCTC)n	Simple_repeat	1	99	(0)	126743
425	33.4	11.9	3.0	chr1	66946606	66947000	(182009422)	+	L2b	LINE/L2	1833	2267	(1152)	128003
459	26.6	5.9	4.3	chr1	66947018	66947202	(182009220)	+	MER5A	DNA/hAT-Charlie	1	188	(1)	128004
552	30.6	6.1	1.7	chr1	67336154	67336389	(181620033)	+	MIRb	SINE/MIR	8	254	(14)	128649
20	26.6	1.9	6.4	chr1	67336575	67336681	(181619741)	+	A-rich	Low_complexity	1	109	(0)	128650
405	29.9	0.7	4.3	chr1	67336732	67336871	(181619551)	+	MIRb	SINE/MIR	1	135	(133)	128651
288	30.8	5.8	8.4	chr1	68690745	68690886	(180265536)	C	L2b	LINE/L2	(5)	3382	3238	131015
42	6.3	6.1	0.0	chr1	68691125	68691190	(180265232)	+	(GA)n	Simple_repeat	1	70	(0)	131016
427	27.5	14.1	5.4	chr1	70004431	70004655	(178951767)	C	MIR	SINE/MIR	(9)	253	13	132742
44	28.4	1.5	0.8	chr1	70004706	70004837	(178951585)	+	(TC)n	Simple_repeat	1	134	(0)	132743
22	11.7	1.9	5.7	chr1	70221460	70221511	(178734911)	+	(GCG)n	Simple_repeat	1	53	(0)	133042
20	22.2	0.0	0.0	chr1	70221683	70221729	(178734693)	+	(GCG)n	Simple_repeat	1	47	(0)	133043
72	14.0	0.8	0.8	chr1	72091353	72091480	(176864942)	+	(TCCC)n	Simple_repeat	1	129	(0)	135778
35	0.0	0.0	0.0	chr1	72282595	72282627	(176673795)	+	(T)n	Simple_repeat	1	33	(0)	136018
18	14.1	8.3	0.0	chr1	72282717	72282764	(176673658)	+	(CCTCC)n	Simple_repeat	1	52	(0)	136019
16	18.8	2.8	8.2	chr1	72282765	72282787	(176673635)	+	(CCT)n	Simple_repeat	1	73	(0)	136020
28	17.9	3.7	3.6	chr1	72282853	72282933	(176673489)	+	(GGC)n	Simple_repeat	1	84	(0)	136021
32	7.4	0.0	0.0	chr1	72282939	72282981	(176673441)	+	(CAG)n	Simple_repeat	1	43	(0)	136022
28	25.9	0.0	0.0	chr1	72283089	72283162	(176673260)	+	A-rich	Low_complexity	1	74	(0)	136023
1681	12.7	12.0	2.6	chr1	73472776	73473114	(175483308)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	137449
453	31.3	7.8	9.1	chr1	73473197	73473614	(175482808)	C	MLT1G3	LTR/ERVL-MaLR	(124)	455	1	137450
2386	10.6	0.3	0.3	chr1	75526853	75527164	(173429258)	+	AluSx	SINE/Alu	1	312	(0)	140040
53	27.0	0.6	3.0	chr1	75527165	75527316	(173429106)	+	A-rich	Low_complexity	15	163	(0)	140041
1047	31.1	5.0	3.3	chr1	76817382	76817870	(172138552)	C	MLT1J	LTR/ERVL-MaLR	(13)	499	2	141988
35	2.8	0.0	0.0	chr1	76868592	76868628	(172087794)	+	(GCA)n	Simple_repeat	1	37	(0)	142078
843	14.7	0.0	0.0	chr1	77549832	77549947	(171406475)	C	AluJb	SINE/Alu	(19)	293	178	143088
1423	18.6	5.9	2.7	chr1	77549948	77550243	(171406179)	C	AluJo	SINE/Alu	(5)	307	2	143089
2162	11.8	1.6	0.7	chr1	78106671	78106975	(170849447)	C	AluSp	SINE/Alu	(5)	308	1	144101
58	22.6	0.0	4.4	chr1	78107027	78107184	(170849238)	+	(CTCC)n	Simple_repeat	1	158	(0)	144102
1457	19.3	6.5	0.0	chr1	78107185	78107443	(170848979)	C	AluJo	SINE/Alu	(34)	278	2	144103
71	20.0	1.9	1.2	chr1	79001103	79001264	(169955158)	+	GA-rich	Low_complexity	1	165	(0)	145275
28	0.0	0.0	0.0	chr1	79001423	79001449	(169954973)	+	(AAAG)n	Simple_repeat	1	27	(0)	145276
30	22.0	3.7	0.0	chr1	80414953	80415033	(168541389)	+	GA-rich	Low_complexity	1	84	(0)	147143
1511	21.8	0.4	1.4	chr1	81032351	81032661	(167923761)	C	AluJb	SINE/Alu	(0)	312	5	147900
24	10.8	0.0	0.0	chr1	81801412	81801451	(167154971)	+	(TCTC)n	Simple_repeat	1	40	(0)	149030
22	9.4	2.9	0.0	chr1	83884024	83884057	(165072365)	+	(TG)n	Simple_repeat	1	35	(0)	151768
37	2.9	0.0	0.0	chr1	83884138	83884173	(165072249)	+	(GA)n	Simple_repeat	1	36	(0)	151769
306	35.4	10.2	3.9	chr1	84266803	84267390	(164689032)	+	L2a	LINE/L2	2391	3019	(400)	152276
228	20.4	0.0	0.0	chr1	84633294	84633337	(164323085)	+	L2c	LINE/L2	3086	3129	(258)	152830
219	23.9	0.0	0.0	chr1	84633465	84633510	(164322912)	+	L2c	LINE/L2	3376	3421	(5)	152830
19438	11.4	1.6	1.6	chr1	86667308	86672117	(162284305)	+	L1MA3	LINE/L1	2648	7470	(254)	155913
2340	9.9	0.6	1.3	chr1	86830812	86831123	(162125299)	+	AluSx1	SINE/Alu	1	310	(2)	156172
22	18.7	0.0	3.7	chr1	86831175	86831228	(162125194)	+	(CCTC)n	Simple_repeat	1	54	(0)	156173
2276	11.6	1.0	0.7	chr1	86831349	86831658	(162124764)	+	AluSz	SINE/Alu	1	311	(1)	156174
20	7.7	15.3	2.4	chr1	87328746	87328817	(161627605)	+	(GAGC)n	Simple_repeat	1	83	(0)	156907
21	29.0	2.6	3.1	chr1	87328818	87328847	(161627575)	+	G-rich	Low_complexity	3	103	(0)	156908
14	9.9	2.8	5.4	chr1	87328906	87328941	(161627481)	+	(CGCCG)n	Simple_repeat	1	37	(0)	156909
7278	15.7	3.5	1.4	chr1	87444043	87445513	(161510909)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1580	1	157068
16	5.3	0.0	0.0	chr1	87796215	87796234	(161160188)	+	(T)n	Simple_repeat	1	20	(0)	157585
755	21.9	5.9	2.6	chr1	87796278	87796507	(161159915)	C	MER121	DNA/hAT?	(86)	315	78	157586
50	3.0	0.0	6.5	chr1	88061358	88061434	(160894988)	+	(CCCT)n	Simple_repeat	1	77	(0)	157975
22	3.5	0.0	0.0	chr1	88061437	88061466	(160894956)	+	(CTTC)n	Simple_repeat	1	30	(0)	157976
3107	24.7	2.6	4.1	chr1	88439617	88440619	(160515803)	+	L1MC5	LINE/L1	7861	8800	(504)	158461
77	26.9	9.8	1.3	chr1	88440620	88441108	(160515314)	+	GA-rich	Low_complexity	1	537	(0)	158462
12	19.6	2.9	0.0	chr1	89720098	89720132	(159236290)	+	(GTGAGT)n	Simple_repeat	1	36	(0)	160234
21721	7.5	2.4	3.5	chr1	91206976	91210739	(157745683)	C	Harlequin-int	LTR/ERV1	(5)	7732	1003	162439
35	9.6	1.8	0.0	chr1	91210740	91210795	(157745627)	+	(CT)n	Simple_repeat	1	57	(0)	162440
21721	27.0	7.3	7.8	chr1	91210796	91211402	(157745020)	C	Harlequin-int	LTR/ERV1	(5894)	1002	288	162439
887	22.7	19.8	0.0	chr1	91335727	91335984	(157620438)	+	LTR16B2	LTR/ERVL	3	311	(151)	162580
14	15.6	0.0	0.0	chr1	91336047	91336075	(157620347)	+	(TCCC)n	Simple_repeat	1	29	(0)	162581
23	37.6	0.0	1.6	chr1	91336135	91336260	(157620162)	+	(TCCC)n	Simple_repeat	1	126	(0)	162581
30	31.0	2.8	2.0	chr1	91336298	91336439	(157619983)	+	(TCCC)n	Simple_repeat	1	146	(0)	162581
971	19.5	1.1	0.0	chr1	91732303	91732487	(157223935)	C	MER5A	DNA/hAT-Charlie	(1)	188	2	163160
1793	15.5	1.1	0.4	chr1	91733755	91734031	(157222391)	+	AluJo	SINE/Alu	1	279	(33)	163162
32	2.9	0.0	0.0	chr1	91734043	91734077	(157222345)	+	(AGGG)n	Simple_repeat	1	35	(0)	163163
14	21.4	3.9	1.9	chr1	91734078	91734118	(157222304)	+	GA-rich	Low_complexity	12	52	(0)	163164
684	20.9	11.0	3.7	chr1	92062760	92062977	(156893445)	C	MER106A	DNA/hAT-Charlie	(0)	236	1	163806
972	30.9	7.1	2.4	chr1	92465449	92465866	(156490556)	+	MLT1J2	LTR/ERVL-MaLR	10	448	(0)	164535
1472	16.8	7.1	0.4	chr1	92465885	92466159	(156490263)	+	MLT2B4	LTR/ERVL	3	297	(259)	164536
458	34.9	3.9	2.2	chr1	92906820	92906998	(156049424)	+	LFSINE_Vert	SINE/tRNA	251	432	(27)	165329
488	21.1	4.5	16.8	chr1	92907331	92907450	(156048972)	+	L1ME2z	LINE/L1	5959	6050	(394)	165330
1821	17.2	0.3	1.0	chr1	92907451	92907741	(156048681)	C	AluJr	SINE/Alu	(23)	289	1	165331
14	14.7	0.0	3.1	chr1	94925906	94925937	(154030485)	+	GA-rich	Low_complexity	1	32	(0)	168514
16	8.5	0.0	0.0	chr1	94926230	94926254	(154030168)	+	(AGC)n	Simple_repeat	1	25	(0)	168515
1588	29.7	11.0	1.4	chr1	95044027	95044865	(153911557)	+	L2a	LINE/L2	2486	3425	(1)	168747
1263	17.9	0.5	2.8	chr1	95059660	95059872	(153896550)	+	MER3	DNA/hAT-Charlie	2	209	(0)	168774
3108	18.3	10.4	5.0	chr1	95086869	95087329	(153869093)	+	LTR48	LTR/ERV1	278	786	(1)	168823
444	31.5	8.5	5.2	chr1	95096550	95096857	(153859565)	C	LTR85a	LTR/Gypsy?	(2)	700	382	168842
3201	25.7	10.3	3.7	chr1	96260206	96261678	(152694744)	+	L1MEc	LINE/L1	54	1716	(4699)	170415
1050	15.7	0.6	1.8	chr1	96746555	96746720	(152209702)	+	AluJo	SINE/Alu	137	300	(12)	171120
312	23.0	5.1	0.0	chr1	96746745	96746818	(152209604)	C	L1ME3F	LINE/L1	(892)	5254	5177	171117
61	5.2	2.5	0.0	chr1	96746837	96746916	(152209506)	+	(CTCC)n	Simple_repeat	1	82	(0)	171121
23	0.0	0.0	0.0	chr1	96746917	96746944	(152209478)	+	(TCCT)n	Simple_repeat	1	28	(0)	171122
926	16.3	5.5	0.0	chr1	96746947	96747118	(152209304)	C	L1PA16	LINE/L1	(17)	6149	5968	171123
475	24.2	9.4	2.8	chr1	96747339	96747555	(152208867)	C	L1ME3F	LINE/L1	(990)	5156	4924	171117
2026	20.4	2.3	0.5	chr1	99372706	99372917	(149583505)	+	MSTD	LTR/ERVL-MaLR	1	217	(179)	174744
41	11.2	0.0	0.0	chr1	99372918	99372984	(149583438)	+	(CT)n	Simple_repeat	1	67	(0)	174745
2026	20.4	2.3	0.5	chr1	99372985	99373160	(149583262)	+	MSTD	LTR/ERVL-MaLR	218	395	(1)	174744
27	15.9	0.0	3.7	chr1	99373286	99373339	(149583083)	+	GA-rich	Low_complexity	1	54	(0)	174746
858	24.9	3.2	21.1	chr1	99428379	99428837	(149527585)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	174813
67	16.0	1.6	0.0	chr1	99856295	99856418	(149100004)	+	(CCTT)n	Simple_repeat	1	126	(0)	175490
10807	4.3	0.3	3.0	chr1	99856420	99856436	(149099986)	C	SVA_C	Retroposon/SVA	(2)	1382	1367	175491
26	0.0	0.0	0.0	chr1	99856437	99856461	(149099961)	+	(TATT)n	Simple_repeat	1	25	(0)	175492
10807	4.3	0.3	3.0	chr1	99856462	99857864	(149098558)	C	SVA_C	Retroposon/SVA	(18)	1366	1	175491
2153	13.5	0.3	1.0	chr1	100350912	100351222	(148605200)	+	AluSz6	SINE/Alu	1	309	(3)	176445
322	32.6	0.0	0.0	chr1	100351338	100351432	(148604990)	+	MamSINE1	SINE/tRNA-RTE	195	289	(1)	176446
25	24.4	1.3	1.3	chr1	102173432	102173506	(146782916)	+	(TCTCCC)n	Simple_repeat	1	76	(0)	178991
63	23.4	1.2	2.9	chr1	105736341	105736509	(143219913)	+	G-rich	Low_complexity	1	171	(0)	183197
6748	23.7	5.0	3.3	chr1	105736645	105738922	(143217500)	C	L1MC3	LINE/L1	(518)	7267	4944	183198
3024	11.8	0.2	1.4	chr1	106427209	106427648	(142528774)	+	THE1B-int	LTR/ERVL-MaLR	1146	1580	(0)	184021
1970	16.8	3.6	0.6	chr1	106427649	106428001	(142528421)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	184021
39	26.6	5.0	0.0	chr1	107419126	107419266	(141537156)	+	(TCTC)n	Simple_repeat	1	148	(0)	185430
17	21.1	0.0	0.0	chr1	107419404	107419437	(141536985)	+	A-rich	Low_complexity	1	34	(0)	185431
12	21.3	4.4	2.1	chr1	108049680	108049724	(140906698)	+	(CAG)n	Simple_repeat	1	47	(0)	186282
10610	6.0	0.9	0.7	chr1	108535476	108536858	(140419564)	C	SVA_D	Retroposon/SVA	(0)	1386	1	186885
45	6.0	2.7	2.6	chr1	108536859	108536933	(140419489)	+	(GAGGGA)n	Simple_repeat	1	77	(0)	186886
853	25.0	5.5	1.8	chr1	108536964	108537191	(140419231)	+	MLT1J2	LTR/ERVL-MaLR	1	237	(211)	186887
635	13.2	2.4	0.8	chr1	108537342	108537463	(140418959)	+	L1MC5	LINE/L1	8459	8582	(722)	186888
1592	21.9	7.4	15.6	chr1	108705019	108705576	(140250846)	+	LTR41C	LTR/ERVL	1	480	(221)	187176
13	18.2	0.0	0.0	chr1	110460300	110460330	(138496092)	+	A-rich	Low_complexity	1	31	(0)	190191
868	26.8	6.6	6.8	chr1	110765894	110766012	(138190410)	+	HAL1	LINE/L1	2388	2502	(5)	190699
16	9.8	0.0	0.0	chr1	110766149	110766170	(138190252)	+	(A)n	Simple_repeat	1	22	(0)	190705
3440	14.5	3.5	0.3	chr1	110773158	110773733	(138182689)	+	L1MB3	LINE/L1	5587	6181	(2)	190715
192	4.7	8.4	0.0	chr1	110773773	110774080	(138182342)	+	(AG)n	Simple_repeat	1	334	(0)	190716
1309	17.5	3.2	0.0	chr1	112472771	112472981	(136483441)	+	AluJb	SINE/Alu	91	308	(4)	193170
71	35.3	1.0	2.4	chr1	112472982	112473273	(136483149)	+	GA-rich	Low_complexity	1	295	(0)	193171
1893	19.5	12.4	7.2	chr1	112473296	112473774	(136482648)	+	L1MEc	LINE/L1	929	1415	(4985)	193169
86	1.2	0.0	1.2	chr1	113850201	113850285	(135106137)	+	(GAAG)n	Simple_repeat	1	85	(0)	195648
2243	11.4	0.0	1.0	chr1	113850286	113850296	(135106126)	+	AluSx3	SINE/Alu	286	296	(15)	195647
354	34.0	11.9	4.9	chr1	114853888	114854039	(134102383)	+	L2	LINE/L2	2929	3082	(337)	197385
1737	13.4	4.6	2.2	chr1	114854159	114854433	(134101989)	C	AluJo	SINE/Alu	(27)	285	4	197387
20	16.7	0.0	0.0	chr1	116376770	116376803	(132579619)	+	A-rich	Low_complexity	1	34	(0)	199617
192	30.9	2.7	10.8	chr1	117420197	117420399	(131536023)	C	L2a	LINE/L2	(1257)	2162	1977	201286
197	25.8	8.8	0.0	chr1	117420472	117420533	(131535889)	+	MIRc	SINE/MIR	175	242	(26)	201288
70	31.1	0.7	2.5	chr1	119971926	119972201	(128984221)	+	(GAGT)n	Simple_repeat	1	278	(0)	204799
19	26.9	0.0	2.9	chr1	120176851	120176920	(128779502)	+	(TATTTTA)n	Simple_repeat	1	70	(0)	205122
273	20.0	7.8	12.0	chr1	120176924	120177031	(128779391)	+	L2a	LINE/L2	3324	3426	(0)	205123
2443	6.4	1.0	2.2	chr1	120177095	120177407	(128779015)	+	AluY	SINE/Alu	1	309	(2)	205124
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
23	29.4	2.7	0.0	chr1	144552484	144552558	(104403864)	+	(TA)n	Simple_repeat	1	77	(0)	209608
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
2497	6.5	0.0	1.9	chr1	146051270	146051577	(102904845)	C	AluSc8	SINE/Alu	(9)	302	1	212030
1401	10.0	0.4	15.3	chr1	146051578	146051756	(102904666)	+	AluSz	SINE/Alu	115	255	(57)	212029
220	22.9	3.7	11.0	chr1	146051838	146051955	(102904467)	C	AluSg4	SINE/Alu	(190)	120	12	212031
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
294	17.2	7.2	3.0	chr1	146377412	146377477	(102578945)	C	MER45B	DNA/hAT-Tip100	(660)	380	312	212534
150	24.8	0.6	0.8	chr1	146944787	146945142	(102011280)	+	(TTCC)n	Simple_repeat	1	358	(0)	213467
26	21.5	3.9	1.2	chr1	146945113	146945190	(102011232)	+	(TTCTTT)n	Simple_repeat	1	81	(0)	213468
26	53.8	1.2	1.7	chr1	146945143	146945181	(102011241)	+	(TTTC)n	Simple_repeat	68	409	(0)	213466
2117	9.9	5.2	0.0	chr1	147085159	147085451	(101870971)	C	AluSx	SINE/Alu	(3)	309	1	213628
3379	18.7	11.1	2.0	chr1	147409658	147410401	(101546021)	+	LTR8B	LTR/ERV1	1	820	(0)	214037
2843	22.8	2.7	9.3	chr1	147410402	147410831	(101545591)	C	L1M4	LINE/L1	(6108)	1409	983	214035
17	17.4	0.0	2.9	chr1	147540964	147540998	(101415424)	+	(CT)n	Simple_repeat	1	35	(0)	214257
115	0.0	2.8	0.0	chr1	147541071	147541178	(101415244)	+	(GA)n	Simple_repeat	1	111	(0)	214258
2405	23.4	11.8	4.9	chr1	148279034	148279814	(100676608)	+	L1MEc	LINE/L1	1300	2199	(4216)	215418
109	2.0	0.0	0.0	chr1	148280008	148280109	(100676313)	+	(AG)n	Simple_repeat	1	102	(0)	215420
2431	5.8	0.3	0.7	chr1	148280111	148280405	(100676017)	+	AluSc5	SINE/Alu	6	299	(10)	215421
1098	14.1	1.2	0.0	chr1	148402715	148402877	(100553545)	+	U1	snRNA	1	165	(0)	215662
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
1722	19.2	0.3	2.6	chr1	150869545	150869852	(98086570)	C	AluJo	SINE/Alu	(11)	301	1	219993
2196	12.4	0.0	0.3	chr1	151300657	151300963	(97655459)	C	7SLRNA	srpRNA	(13)	307	2	220925
2171	11.6	2.3	1.7	chr1	151301210	151301382	(97655040)	C	AluSg4	SINE/Alu	(6)	304	135	220926
12	11.2	3.2	3.1	chr1	152460340	152460370	(96496052)	+	(GGTGTG)n	Simple_repeat	1	32	(0)	222820
2027	8.6	0.0	0.0	chr1	153519903	153520157	(95436265)	+	AluSg	SINE/Alu	2	256	(54)	224222
82	16.8	1.4	0.0	chr1	153520162	153520308	(95436114)	+	GA-rich	Low_complexity	1	149	(0)	224223
2813	7.3	5.1	3.1	chr1	153520310	153520732	(95435690)	C	MER4A1	LTR/ERV1	(39)	433	2	224221
12	8.4	0.0	6.9	chr1	153728480	153728508	(95227914)	+	GA-rich	Low_complexity	1	29	(0)	224670
18	34.4	0.0	0.0	chr1	153728659	153728731	(95227691)	+	(GCA)n	Simple_repeat	1	73	(0)	224671
48	0.0	0.0	0.0	chr1	154869724	154869766	(94086656)	+	(GCT)n	Simple_repeat	1	43	(0)	226923
38	2.6	0.0	0.0	chr1	154869841	154869879	(94086543)	+	(GCT)n	Simple_repeat	1	39	(0)	226924
2450	4.4	0.3	0.0	chr1	155139368	155139664	(93816758)	+	AluY	SINE/Alu	2	299	(12)	227423
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
2259	13.2	0.3	0.0	chr1	155500687	155500981	(93455441)	+	AluSz6	SINE/Alu	1	296	(16)	228136
223	21.8	14.7	5.3	chr1	156054379	156054527	(92901895)	+	MIRc	SINE/MIR	99	268	(0)	229384
1667	16.4	0.7	3.1	chr1	156101206	156101498	(92854924)	+	AluJo	SINE/Alu	1	286	(26)	229487
331	36.7	1.0	12.5	chr1	156101499	156101627	(92854795)	C	L2b	LINE/L2	(628)	2791	2698	229486
40	2.5	0.0	0.0	chr1	156101637	156101677	(92854745)	+	(AGGG)n	Simple_repeat	1	41	(0)	229488
325	28.8	7.8	2.8	chr1	156101678	156101889	(92854533)	C	L2	LINE/L2	(619)	2800	2575	229489
2359	10.3	0.0	0.0	chr1	156919454	156919753	(92036669)	+	AluSz	SINE/Alu	1	300	(12)	230986
13830	10.2	2.7	2.9	chr1	156919754	156919926	(92036496)	+	Tigger1	DNA/TcMar-Tigger	2250	2414	(4)	230981
12	18.8	2.6	2.6	chr1	156920241	156920278	(92036144)	+	(CCCCAGC)n	Simple_repeat	1	39	(0)	230987
208	35.4	9.9	1.6	chr1	158028985	158029113	(90927309)	C	L2b	LINE/L2	(2)	3373	3233	232544
35	0.0	0.0	0.0	chr1	158029338	158029367	(90927055)	+	(TG)n	Simple_repeat	1	30	(0)	232545
16	19.8	6.2	0.0	chr1	158029379	158029426	(90926996)	+	(GCAT)n	Simple_repeat	1	51	(0)	232546
814	23.7	7.5	3.2	chr1	159960860	159961112	(88995310)	+	LTR16E1	LTR/ERVL	273	537	(1)	235002
18	3.3	6.5	0.0	chr1	159961508	159961538	(88994884)	+	(TTTCTT)n	Simple_repeat	1	33	(0)	235003
5302	25.5	15.3	7.2	chr1	160472243	160473945	(88482477)	C	L2a	LINE/L2	(303)	3123	564	235821
50	0.0	0.0	0.0	chr1	160473946	160473990	(88482432)	+	(TTA)n	Simple_repeat	1	45	(0)	235822
5302	25.4	15.6	7.3	chr1	160473991	160474558	(88481864)	C	L2a	LINE/L2	(2206)	1213	633	235821
1689	16.4	1.9	5.0	chr1	160682167	160682484	(88273938)	+	AluJr	SINE/Alu	2	309	(3)	236113
19	16.1	9.8	0.0	chr1	160682488	160682538	(88273884)	+	GA-rich	Low_complexity	1	56	(0)	236114
238	26.0	14.2	2.3	chr1	160682541	160682670	(88273752)	+	MIRb	SINE/MIR	2	149	(119)	236115
13	20.4	2.4	2.4	chr1	161198502	161198542	(87757880)	+	(CAG)n	Simple_repeat	1	42	(0)	237061
1166	25.9	10.7	0.8	chr1	161279974	161280343	(87676079)	+	L2a	LINE/L2	1259	1669	(1750)	237208
433	30.6	6.7	5.0	chr1	161280344	161280786	(87675636)	+	L2-3_Crp	LINE/L2	508	958	(1138)	237209
205	32.6	2.3	2.3	chr1	161750401	161750488	(87205934)	C	L2c	LINE/L2	(62)	3325	3238	238034
2028	7.5	5.8	2.5	chr1	161750663	161750943	(87205479)	+	AluSx4	SINE/Alu	2	292	(18)	238035
1174	15.2	0.5	4.6	chr1	162547260	162547456	(86408966)	+	AluJr	SINE/Alu	85	273	(39)	239342
2353	9.6	0.7	0.0	chr1	162547758	162548058	(86408364)	+	AluSc	SINE/Alu	2	304	(5)	239343
4939	25.2	7.9	0.8	chr1	164452158	164453590	(84502832)	+	L1MB7	LINE/L1	69	1611	(5256)	242125
463	20.2	0.0	1.3	chr1	164453598	164453676	(84502746)	+	FLAM_C	SINE/Alu	30	107	(36)	242126
97	15.7	6.0	3.2	chr1	164453677	164453824	(84502598)	+	GA-rich	Low_complexity	1	147	(0)	242127
61	1.5	3.0	0.0	chr1	164453825	164453890	(84502532)	+	(GGAAG)n	Simple_repeat	1	68	(0)	242128
97	15.7	6.0	3.2	chr1	164453891	164454009	(84502413)	+	GA-rich	Low_complexity	148	274	(0)	242129
4642	18.6	4.0	1.4	chr1	164454024	164454638	(84501784)	+	L1MB7	LINE/L1	1612	2250	(4617)	242125
1975	20.4	0.5	0.3	chr1	165026190	165026573	(83929849)	C	MER89	LTR/ERV1	(0)	559	175	242991
945	21.3	4.1	1.6	chr1	165184907	165185180	(83771242)	+	L1ME3D	LINE/L1	5657	5940	(183)	243232
95	15.1	0.0	0.0	chr1	165185476	165185634	(83770788)	+	GA-rich	Low_complexity	1	159	(0)	243233
259	27.6	13.9	2.1	chr1	165185690	165185878	(83770544)	+	MIRc	SINE/MIR	37	251	(17)	243234
434	30.0	0.0	0.0	chr1	165622335	165622484	(83333938)	+	HAL1ME	LINE/L1	1971	2120	(345)	243974
34	3.0	0.0	0.0	chr1	165622717	165622750	(83333672)	+	(GA)n	Simple_repeat	1	34	(0)	243975
12	12.0	0.0	6.5	chr1	165622754	165622784	(83333638)	+	G-rich	Low_complexity	1	31	(0)	243976
15	18.3	2.4	2.4	chr1	165622795	165622835	(83333587)	+	(TCTC)n	Simple_repeat	1	42	(0)	243977
281	32.2	8.8	3.3	chr1	165634480	165634662	(83321760)	+	L2a	LINE/L2	2947	3140	(286)	243997
15	18.5	0.0	7.8	chr1	165634713	165634752	(83321670)	+	(CT)n	Simple_repeat	1	36	(0)	243998
31	0.0	4.4	4.3	chr1	165634753	165634797	(83321625)	+	(CTCC)n	Simple_repeat	1	47	(0)	243999
15	18.5	0.0	7.8	chr1	165634798	165634807	(83321615)	+	(CT)n	Simple_repeat	1	10	(0)	244000
15	13.9	0.0	0.0	chr1	167174069	167174092	(81782330)	+	(T)n	Simple_repeat	1	24	(0)	246266
1012	21.6	4.8	0.8	chr1	167453165	167453402	(81503020)	C	MIRc	SINE/MIR	(17)	251	4	246717
2156	13.2	0.0	1.6	chr1	167658414	167658730	(81297692)	C	AluSz	SINE/Alu	(0)	312	1	247084
943	29.2	9.0	6.6	chr1	167658731	167659280	(81297142)	C	L1ME3G	LINE/L1	(345)	579	15	247083
223	22.0	12.5	4.2	chr1	169086939	169087033	(79869389)	+	MIR1_Amn	SINE/MIR	72	175	(55)	249416
42	22.7	4.8	0.8	chr1	169087035	169087159	(79869263)	+	(CTCT)n	Simple_repeat	1	131	(0)	249417
253	23.2	5.5	0.0	chr1	169087181	169087249	(79869173)	+	AmnSINE1	SINE/5S-Deu-L2	503	575	(0)	249418
1688	4.9	0.0	3.5	chr1	169550129	169550359	(79406063)	C	L1PA5	LINE/L1	(0)	6154	5932	250097
22	28.4	4.8	4.6	chr1	170226531	170226548	(78729874)	+	(TTTCC)n	Simple_repeat	1	67	(85)	251032
46	23.6	0.0	0.9	chr1	170226549	170226655	(78729767)	+	(TCCC)n	Simple_repeat	1	107	(0)	251033
22	28.4	4.8	4.6	chr1	170226656	170226675	(78729747)	+	(TTTCC)n	Simple_repeat	68	152	(0)	251032
66	3.0	0.0	0.0	chr1	170547398	170547465	(78408957)	+	(CTGCTGCTA)n	Simple_repeat	1	68	(0)	251459
406	15.5	4.0	1.0	chr1	170547620	170547717	(78408705)	C	Looper	DNA/PiggyBac	(70)	1487	1387	251460
43	17.8	2.1	1.1	chr1	170663003	170663057	(78293365)	+	(CT)n	Simple_repeat	1	56	(0)	251604
32	5.4	0.0	0.0	chr1	170663058	170663096	(78293326)	+	(CTCC)n	Simple_repeat	1	39	(0)	251605
43	17.8	2.1	1.1	chr1	170663097	170663133	(78293289)	+	(CT)n	Simple_repeat	1	37	(0)	251606
287	32.6	10.9	5.9	chr1	171353334	171353761	(77602661)	+	L2a	LINE/L2	2817	3352	(74)	252560
85	20.2	0.0	0.6	chr1	171931977	171932134	(77024288)	+	(TCCC)n	Simple_repeat	1	158	(0)	253567
1837	16.2	0.0	5.3	chr1	171932135	171932454	(77023968)	C	AluJr4	SINE/Alu	(5)	307	5	253568
65	22.8	0.7	0.0	chr1	172145301	172145446	(76810976)	+	(TCTC)n	Simple_repeat	1	147	(0)	253851
1314	28.7	5.9	2.6	chr1	172856561	172857120	(76099302)	C	L2a	LINE/L2	(268)	3158	2573	254785
31	25.7	0.0	0.0	chr1	172857121	172857197	(76099225)	+	GA-rich	Low_complexity	1	77	(0)	254796
1029	26.1	2.6	5.1	chr1	172857198	172857508	(76098914)	C	L2a	LINE/L2	(831)	2588	2286	254785
27768	6.8	1.9	1.4	chr1	173684303	173688508	(75267914)	C	HERVIP10FH-int	LTR/ERV1	(0)	5102	864	255944
52	22.3	0.0	0.0	chr1	173688514	173688620	(75267802)	+	(CT)n	Simple_repeat	1	107	(0)	255945
411	13.6	4.0	2.8	chr1	173688627	173688905	(75267517)	C	HERVIP10F-int	LTR/ERV1	(1237)	4137	3988	255946
207	37.0	0.0	0.0	chr1	173714496	173714568	(75241854)	+	L2c	LINE/L2	3296	3368	(19)	255988
17	16.9	1.9	5.7	chr1	173714998	173715049	(75241373)	+	GA-rich	Low_complexity	1	53	(0)	255989
236	31.6	10.1	8.0	chr1	174114765	174114977	(74841445)	+	MLT1N2	LTR/ERVL-MaLR	3	220	(342)	256737
15	26.5	2.4	0.0	chr1	174114989	174115030	(74841392)	+	(CT)n	Simple_repeat	1	43	(0)	256738
320	23.1	10.8	0.0	chr1	174115269	174115359	(74841063)	+	MLT1N2	LTR/ERVL-MaLR	389	490	(72)	256737
31	3.1	0.0	0.0	chr1	174799759	174799791	(74156631)	+	(GCA)n	Simple_repeat	1	33	(0)	257708
57	0.0	0.0	0.0	chr1	174799931	174799979	(74156443)	+	(CA)n	Simple_repeat	1	49	(0)	257709
1371	27.9	16.9	2.2	chr1	178895672	178896431	(70059991)	C	L2a	LINE/L2	(804)	2615	1722	263813
5356	1.3	1.1	0.0	chr1	178896468	178897080	(70059342)	C	L1PA2	LINE/L1	(0)	6155	5536	263814
9836	14.6	1.9	4.5	chr1	180658869	180659193	(68297229)	C	L1MA3	LINE/L1	(2249)	5316	5115	266760
65	0.0	0.0	0.0	chr1	180659194	180659251	(68297171)	+	(CTTC)n	Simple_repeat	1	58	(0)	266763
9471	23.0	3.1	9.8	chr1	180659252	180659323	(68297099)	C	L1MA3	LINE/L1	(2448)	5117	5117	266760
124	7.4	1.2	0.6	chr1	180659324	180659496	(68296926)	+	(CTTC)n	Simple_repeat	1	175	(0)	266764
448	10.0	0.0	0.0	chr1	180659501	180659560	(68296862)	C	AluSx	SINE/Alu	(44)	268	209	266765
9471	23.0	3.1	9.8	chr1	180659561	180659593	(68296829)	C	L1MA3	LINE/L1	(2448)	5113	5117	266760
109	0.0	6.0	0.0	chr1	181023029	181023145	(67933277)	+	(TC)n	Simple_repeat	1	124	(0)	267309
1164	26.7	10.6	2.5	chr1	181601520	181602299	(67354123)	+	L2a	LINE/L2	2537	3397	(29)	268239
10924	10.7	3.8	1.5	chr1	182003320	182005087	(66951335)	+	L1PB1	LINE/L1	1	1809	(5054)	268715
578	22.8	4.1	4.1	chr1	184327565	184327733	(64628689)	+	L2a	LINE/L2	3257	3425	(1)	272450
58	16.1	0.0	0.0	chr1	184327820	184327920	(64628502)	+	(TCTC)n	Simple_repeat	1	101	(0)	272451
33	2.6	0.0	0.0	chr1	184327920	184327958	(64628464)	+	(TG)n	Simple_repeat	1	39	(0)	272452
2985	0.6	0.0	0.0	chr1	184967922	184968232	(63988190)	+	AluYb9	SINE/Alu	1	311	(7)	273519
1306	14.0	0.0	7.4	chr1	186402405	186402625	(62553797)	C	AluJo	SINE/Alu	(22)	290	86	275540
616	24.0	2.3	0.0	chr1	186402635	186402759	(62553663)	C	AluJo	SINE/Alu	(56)	256	129	275542
568	20.2	11.3	0.8	chr1	186402763	186402881	(62553541)	C	AluJr4	SINE/Alu	(179)	133	1	275543
202	16.1	0.0	0.0	chr1	186430806	186430836	(62525586)	C	MIRc	SINE/MIR	(25)	243	213	275580
2182	15.4	1.7	8.8	chr1	187146406	187146635	(61809787)	C	L1MC1	LINE/L1	(979)	5342	5118	276605
126	18.8	0.8	0.8	chr1	187146641	187146890	(61809532)	+	(CTCC)n	Simple_repeat	1	252	(0)	276609
3364	16.1	5.1	1.8	chr1	187146917	187147601	(61808821)	C	L1MC1	LINE/L1	(1200)	5121	4413	276605
20	23.9	3.9	2.5	chr1	187635044	187635121	(61321301)	+	A-rich	Low_complexity	1	81	(0)	277297
118	22.8	0.0	4.8	chr1	188420420	188420749	(60535673)	+	(TCCC)n	Simple_repeat	1	330	(0)	278275
28	41.9	2.6	4.6	chr1	188420750	188420769	(60535653)	+	(TTTC)n	Simple_repeat	219	389	(0)	278274
2457	8.5	0.0	0.0	chr1	189224670	189224963	(59731459)	+	AluSc	SINE/Alu	1	294	(15)	279287
17	10.8	4.4	4.3	chr1	189224965	189225009	(59731413)	+	(TCCTTC)n	Simple_repeat	1	47	(0)	279288
8853	5.2	0.2	20.4	chr1	189225010	189226738	(59729684)	+	SVA_B	Retroposon/SVA	1	1380	(3)	279289
89	21.1	3.5	3.3	chr1	190046193	190046448	(58909974)	+	GA-rich	Low_complexity	1	256	(0)	280376
15	19.9	2.5	0.0	chr1	190046548	190046587	(58909835)	+	A-rich	Low_complexity	1	41	(0)	280377
79	11.4	0.8	1.5	chr1	190336775	190336905	(58619517)	+	(TCCT)n	Simple_repeat	1	132	(0)	280748
50	4.0	0.0	0.0	chr1	190478703	190478754	(58477668)	+	(TC)n	Simple_repeat	1	52	(0)	280953
46	4.3	0.0	0.0	chr1	192735320	192735367	(56221055)	+	(TG)n	Simple_repeat	1	48	(0)	283783
44	16.1	0.0	0.0	chr1	192735368	192735446	(56220976)	+	GA-rich	Low_complexity	1	79	(0)	283784
2654	24.2	9.1	5.8	chr1	192740838	192741289	(56215133)	C	L1M4a1	LINE/L1	(405)	2174	1704	283797
1462	17.2	4.0	0.8	chr1	192741290	192741557	(56214865)	C	AluJr	SINE/Alu	(30)	282	6	283798
16	25.5	0.0	3.6	chr1	193122096	193122150	(55834272)	+	GA-rich	Low_complexity	1	55	(0)	284394
16	18.3	2.1	4.2	chr1	193122142	193122188	(55834234)	+	(GGC)n	Simple_repeat	1	48	(0)	284395
389	29.8	6.4	5.9	chr1	193295898	193296100	(55660322)	+	MER67A	LTR/ERV1	1	204	(457)	284655
406	26.4	5.3	3.6	chr1	193296200	193296364	(55660058)	+	MER67A	LTR/ERV1	376	543	(0)	284655
5332	17.7	4.0	6.2	chr1	193296365	193297470	(55658952)	+	L1MCa	LINE/L1	6	1086	(5422)	284656
457	24.8	9.3	1.1	chr1	193374559	193374732	(55581690)	C	L1MA10	LINE/L1	(0)	6334	6012	284779
20	34.7	4.1	0.0	chr1	193374733	193374741	(55581681)	+	(TCTC)n	Simple_repeat	1	39	(66)	284780
25	26.2	1.2	2.5	chr1	193374742	193374821	(55581601)	+	(TTCC)n	Simple_repeat	1	81	(0)	284781
20	34.7	4.1	0.0	chr1	193374822	193374833	(55581589)	+	(TCTC)n	Simple_repeat	40	105	(0)	284780
1431	14.4	0.8	0.0	chr1	193374834	193375083	(55581339)	C	L1MC	LINE/L1	(675)	5658	5407	284782
2229	21.3	2.0	4.6	chr1	193916502	193917023	(55039399)	+	MER67D	LTR/ERV1	2	509	(5)	285473
1061	14.8	1.3	0.0	chr1	196500001	196500149	(52456273)	+	AluSx	SINE/Alu	140	290	(22)	288744
43	15.7	0.8	8.5	chr1	196500150	196500278	(52456144)	+	GA-rich	Low_complexity	1	130	(0)	288745
50	0.0	0.0	0.0	chr1	196500279	196500323	(52456099)	+	(AGGG)n	Simple_repeat	1	45	(0)	288746
18	14.5	0.0	2.5	chr1	196608422	196608461	(52347961)	+	G-rich	Low_complexity	1	40	(0)	288876
19	0.0	7.7	4.8	chr1	197197309	197197347	(51759075)	+	(GATATA)n	Simple_repeat	1	42	(0)	289608
34	17.5	5.6	1.1	chr1	197197525	197197613	(51758809)	+	GA-rich	Low_complexity	1	94	(0)	289609
573	27.0	15.4	0.0	chr1	197197663	197197903	(51758519)	+	MER103C	DNA/hAT-Charlie	6	290	(7)	289610
239	34.8	8.8	11.3	chr1	197535679	197536050	(51420372)	+	MLT1O	LTR/ERVL-MaLR	35	396	(146)	290043
22	19.2	0.0	5.0	chr1	197536053	197536125	(51420297)	+	G-rich	Low_complexity	1	69	(0)	290044
48	1.4	9.1	1.2	chr1	197536126	197536202	(51420220)	+	(GAGAT)n	Simple_repeat	1	84	(0)	290045
22	12.2	0.0	0.0	chr1	197915288	197915324	(51041098)	+	(CTC)n	Simple_repeat	1	37	(0)	290526
23	24.3	4.1	4.0	chr1	197915793	197915889	(51040533)	+	(TTCC)n	Simple_repeat	1	101	(0)	290527
41	7.3	0.0	1.7	chr1	198075565	198075624	(50880798)	+	(CCTC)n	Simple_repeat	1	60	(0)	290734
93	19.6	1.8	2.6	chr1	198447557	198447630	(50508792)	+	(TCCT)n	Simple_repeat	1	76	(0)	291218
27	0.0	6.1	0.0	chr1	198447631	198447663	(50508759)	+	(CCCTTT)n	Simple_repeat	1	35	(0)	291219
93	19.6	1.8	2.6	chr1	198447664	198447816	(50508606)	+	(TCCT)n	Simple_repeat	1	149	(0)	291220
32	38.5	3.9	0.9	chr1	198873761	198873968	(50082454)	+	GA-rich	Low_complexity	1	216	(0)	291789
319	30.0	4.0	4.0	chr1	198873988	198874112	(50082310)	+	MER130	DNA	1117	1241	(353)	291790
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
1477	3.7	0.2	9.1	chr1	201255823	201258601	(47697821)	+	(AGTGATGG)n	Simple_repeat	1	2786	(0)	295734
27	0.0	0.0	0.0	chr1	202643319	202643344	(46313078)	+	(GGGCGG)n	Simple_repeat	1	26	(0)	298237
13	31.8	0.0	4.2	chr1	202643363	202643433	(46312989)	+	(TCCCGC)n	Simple_repeat	1	71	(0)	298238
27	21.5	1.5	1.5	chr1	202643409	202643474	(46312948)	+	(CT)n	Simple_repeat	1	67	(0)	298239
804	26.8	5.8	3.7	chr1	202672562	202672964	(46283458)	+	L1MEg	LINE/L1	815	1226	(4858)	298289
262	39.4	2.0	2.8	chr1	203467468	203467715	(45488707)	C	L2b	LINE/L2	(466)	2953	2708	299652
855	19.0	18.9	3.6	chr1	203583647	203583793	(45372629)	+	AluJo	SINE/Alu	137	301	(11)	299882
131	23.7	0.3	2.2	chr1	203583794	203584110	(45372312)	+	GA-rich	Low_complexity	1	318	(0)	299884
565	14.9	8.6	0.0	chr1	203584235	203584341	(45372081)	C	L2a	LINE/L2	(6)	3420	3304	299885
1736	15.0	2.7	3.1	chr1	204398196	204398488	(44557934)	+	AluJr	SINE/Alu	1	292	(20)	301475
13	22.5	0.0	0.0	chr1	204398586	204398621	(44557801)	+	G-rich	Low_complexity	1	36	(0)	301476
2314	11.0	0.3	0.0	chr1	205243103	205243412	(43713010)	+	AluSx1	SINE/Alu	1	311	(1)	303067
339	34.5	18.5	2.1	chr1	205243413	205245062	(43711360)	C	L2c	LINE/L2	(629)	2790	790	303066
15	15.3	2.6	2.6	chr1	207321816	207321853	(41634569)	+	(GCT)n	Simple_repeat	1	39	(0)	306485
2196	23.9	3.8	2.1	chr1	207512891	207513462	(41442960)	C	ERVL-E-int	LTR/ERVL	(3833)	1834	1253	306759
592	26.9	3.9	2.5	chr1	207513467	207513668	(41442754)	C	LTR33C	LTR/ERVL	(422)	207	3	306760
49	16.8	0.0	1.1	chr1	207513704	207513796	(41442626)	+	(TTCC)n	Simple_repeat	1	93	(0)	306761
1461	25.2	5.0	3.4	chr1	207513797	207514258	(41442164)	C	L1M5	LINE/L1	(1954)	4192	3731	306762
617	25.9	3.9	2.0	chr1	207685773	207685973	(41270449)	C	LTR33C	LTR/ERVL	(422)	207	3	307018
102	16.1	0.0	0.0	chr1	207686009	207686184	(41270238)	+	(TTCC)n	Simple_repeat	1	176	(0)	307019
759	28.3	4.2	4.2	chr1	207686185	207686609	(41269813)	C	L1M5	LINE/L1	(1954)	4192	3768	307020
6776	22.0	4.4	5.3	chr1	209518813	209520473	(39435949)	+	MSTB2-int	LTR/ERVL-MaLR	1	1646	(5)	309771
1906	20.2	1.5	4.4	chr1	212501109	212501516	(36454906)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	314629
2080	13.8	0.0	0.0	chr1	212549144	212549440	(36406982)	+	AluSz	SINE/Alu	1	297	(15)	314731
56	23.2	0.0	0.8	chr1	212549441	212549561	(36406861)	+	G-rich	Low_complexity	9	128	(0)	314732
647	20.4	8.8	8.8	chr1	212549575	212549800	(36406622)	+	MamTip3	DNA/hAT-Tip100	143	368	(132)	314733
925	26.0	0.8	8.1	chr1	213083716	213083987	(35872435)	+	MLT1F	LTR/ERVL-MaLR	1	252	(296)	315699
422	20.7	1.8	7.1	chr1	213083997	213084143	(35872279)	C	L1MC4	LINE/L1	(17)	8025	7917	315702
17	24.9	2.0	0.0	chr1	213084144	213084193	(35872229)	+	(CTCTCT)n	Simple_repeat	1	51	(0)	315703
1073	16.3	0.6	3.3	chr1	213084260	213084443	(35871979)	C	AluJb	SINE/Alu	(5)	307	129	315704
72	24.1	1.8	6.0	chr1	213428351	213428571	(35527851)	+	(CCTT)n	Simple_repeat	1	211	(0)	316217
37	4.8	0.0	0.0	chr1	213428572	213428614	(35527808)	+	(CTCC)n	Simple_repeat	1	43	(0)	316218
72	24.1	1.8	6.0	chr1	213428615	213428668	(35527754)	+	(CCTT)n	Simple_repeat	4	55	(0)	316219
511	23.2	9.0	0.1	chr1	213439509	213439667	(35516755)	C	LTR16A	LTR/ERVL	(21)	430	253	316233
36	19.9	0.0	0.0	chr1	213439818	213439886	(35516536)	+	GA-rich	Low_complexity	1	69	(0)	316234
61	25.9	3.3	2.3	chr1	213988061	213988073	(34968349)	+	(CTCTT)n	Simple_repeat	1	33	(186)	317039
24	22.4	8.4	3.5	chr1	213988074	213988204	(34968218)	+	(TCT)n	Simple_repeat	1	142	(0)	317040
61	25.9	3.3	2.3	chr1	213988205	213988272	(34968150)	+	(CTCTT)n	Simple_repeat	34	219	(0)	317039
49	2.2	0.0	0.0	chr1	213988411	213988456	(34967966)	+	(AG)n	Simple_repeat	1	46	(0)	317041
205	21.1	3.7	3.7	chr1	219779274	219779327	(29177095)	+	MIR3	SINE/MIR	14	67	(141)	325129
2043	24.6	11.8	4.5	chr1	219779681	219780562	(29175860)	+	L1MC4	LINE/L1	6487	7441	(601)	325130
2132	12.8	1.3	1.6	chr1	219798796	219799107	(29157315)	+	AluSz6	SINE/Alu	1	311	(1)	325163
50	14.2	1.1	1.1	chr1	219799117	219799207	(29157215)	+	G-rich	Low_complexity	1	92	(0)	325164
3165	28.7	7.6	2.7	chr1	220289254	220290790	(28665632)	C	L1ME2	LINE/L1	(5464)	1639	20	325977
23	15.5	2.2	0.0	chr1	220300500	220300544	(28655878)	+	(AGC)n	Simple_repeat	1	46	(0)	326003
253	29.1	5.4	9.0	chr1	220810149	220810303	(28146119)	C	Charlie23a	DNA/hAT-Charlie	(147)	192	44	326776
419	27.4	8.4	3.9	chr1	220810813	220810994	(28145428)	+	MIRb	SINE/MIR	21	211	(57)	326777
2103	12.1	0.0	5.6	chr1	221075398	221075719	(27880703)	C	AluSz	SINE/Alu	(8)	304	1	327119
862	15.1	1.5	10.8	chr1	221075720	221075905	(27880517)	C	L1PA15	LINE/L1	(154)	6011	5848	327118
1211	18.5	17.2	5.2	chr1	222157484	222157888	(26798534)	+	MER31B	LTR/ERV1	1	464	(2)	328735
258	23.7	17.7	2.1	chr1	222262824	222262918	(26693504)	+	L2c	LINE/L2	3211	3323	(64)	328866
18	10.7	0.0	5.9	chr1	222262986	222263019	(26693403)	+	(CA)n	Simple_repeat	1	34	(0)	328867
51	10.5	2.4	1.2	chr1	222263019	222263102	(26693320)	+	(AG)n	Simple_repeat	1	86	(0)	328868
1870	25.4	9.2	2.3	chr1	222263398	222264236	(26692186)	+	L2a	LINE/L2	2413	3318	(108)	328869
2078	12.2	0.4	0.4	chr1	224011018	224011296	(24945126)	+	AluSp	SINE/Alu	1	279	(34)	331630
29	25.4	0.0	4.1	chr1	224011297	224011393	(24945029)	+	GA-rich	Low_complexity	1	97	(0)	331631
12	22.1	0.0	0.0	chr1	224011367	224011398	(24945024)	+	(GAAC)n	Simple_repeat	1	32	(0)	331632
401	25.6	9.7	5.5	chr1	224333628	224333703	(24622719)	+	MER94	DNA/hAT-Blackjack	1	84	(50)	332357
2612	19.0	6.3	0.9	chr1	224333704	224334230	(24622192)	C	MER89	LTR/ERV1	(0)	559	3	332358
23	21.6	0.0	0.0	chr1	224616317	224616327	(24340095)	+	(GCAGCG)n	Simple_repeat	1	21	(42)	332883
21	10.0	0.0	0.0	chr1	224616328	224616360	(24340062)	+	(GGC)n	Simple_repeat	1	33	(0)	332884
23	21.6	0.0	0.0	chr1	224616361	224616379	(24340043)	+	(GCAGCG)n	Simple_repeat	22	63	(0)	332883
551	30.9	9.0	5.2	chr1	224705744	224706141	(24250281)	+	L2b	LINE/L2	2975	3382	(5)	333012
1897	13.8	13.8	1.1	chr1	225078585	225078768	(23877654)	+	MSTA	LTR/ERVL-MaLR	1	212	(216)	333550
137	2.4	0.0	0.0	chr1	225078769	225078898	(23877524)	+	(TC)n	Simple_repeat	1	130	(0)	333551
1897	13.8	13.8	1.1	chr1	225078899	225079086	(23877336)	+	MSTA	LTR/ERVL-MaLR	213	428	(0)	333550
16	9.3	0.0	0.0	chr1	225519570	225519592	(23436830)	+	(A)n	Simple_repeat	1	23	(0)	334088
375	27.8	9.3	1.9	chr1	225539261	225539469	(23416953)	+	Charlie7a	DNA/hAT-Charlie	2	227	(45)	334107
14	22.2	0.0	2.6	chr1	225652948	225652986	(23303436)	+	(CCT)n	Simple_repeat	1	39	(0)	334307
307	23.1	21.4	9.0	chr1	225762986	225763007	(23193415)	C	MIRc	SINE/MIR	(9)	259	237	334544
2164	11.7	1.0	0.7	chr1	225763008	225763305	(23193117)	C	AluSx	SINE/Alu	(13)	299	1	334545
413	26.8	11.1	5.6	chr1	225878130	225878307	(23078115)	C	MIR3	SINE/MIR	(11)	197	9	334731
216	33.3	9.8	3.2	chr1	226110954	226111077	(22845345)	C	MIRb	SINE/MIR	(72)	196	64	335234
317	22.2	13.5	2.2	chr1	227070627	227070718	(21885704)	C	L2a	LINE/L2	(4)	3422	3319	336874
186	24.5	1.9	0.0	chr1	227071128	227071179	(21885243)	C	L2c	LINE/L2	(4)	3422	3337	336875
2362	23.3	17.9	2.1	chr1	227251737	227253173	(21703249)	+	L1MEg	LINE/L1	2584	4607	(1539)	337158
57	6.0	5.8	0.0	chr1	227253182	227253268	(21703154)	+	(AG)n	Simple_repeat	1	92	(0)	337160
1846	14.1	0.0	0.0	chr1	227253350	227253604	(21702818)	+	AluSx1	SINE/Alu	37	291	(21)	337161
340	34.8	3.2	5.2	chr1	227285187	227285377	(21671045)	+	MER5A	DNA/hAT-Charlie	2	188	(1)	337220
203	23.3	15.1	7.6	chr1	227285799	227285877	(21670545)	+	L2a	LINE/L2	1222	1307	(2112)	337221
3505	19.8	3.3	1.3	chr1	227285888	227286660	(21669762)	C	MSTB-int	LTR/ERVL-MaLR	(862)	789	1	337222
16	0.0	0.0	0.0	chr1	227317512	227317528	(21638894)	+	(A)n	Simple_repeat	1	17	(0)	337280
14	25.0	2.1	0.0	chr1	227560016	227560062	(21396360)	+	(CTCTCT)n	Simple_repeat	1	48	(0)	337641
30	10.3	1.9	0.0	chr1	227560096	227560147	(21396275)	+	(TC)n	Simple_repeat	1	53	(0)	337642
39	34.1	1.1	1.7	chr1	227560177	227560355	(21396067)	+	(CTCTTT)n	Simple_repeat	1	181	(0)	337643
30	0.0	0.0	0.0	chr1	227560365	227560390	(21396032)	+	(TG)n	Simple_repeat	1	26	(0)	337644
2647	14.4	5.2	7.3	chr1	227719181	227719674	(21236748)	+	LTR2B	LTR/ERV1	1	483	(0)	337815
637	16.3	5.3	2.7	chr1	227719675	227719895	(21236527)	C	HERVIP10FH-int	LTR/ERV1	(4204)	898	672	337816
142	18.0	10.8	3.2	chr1	227906278	227906963	(21049459)	+	(TGCCTCCC)n	Simple_repeat	1	738	(0)	338035
3509	20.2	3.5	0.3	chr1	227906986	227907671	(21048751)	C	LTR62	LTR/ERVL	(0)	709	1	338036
373	23.1	6.3	2.2	chr1	228094693	228094829	(20861593)	C	HAL1	LINE/L1	(812)	1695	1553	338284
1418	16.4	4.2	6.0	chr1	228426657	228426973	(20529449)	+	MSTB1	LTR/ERVL-MaLR	21	331	(101)	338695
86	24.2	1.0	0.5	chr1	228426975	228427177	(20529245)	+	(CTCC)n	Simple_repeat	1	205	(0)	338696
913	14.1	9.4	4.9	chr1	228427207	228427369	(20529053)	C	AluJb	SINE/Alu	(118)	194	24	338697
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
242	29.8	22.7	0.8	chr1	229364859	229365125	(19591297)	C	L2b	LINE/L2	(3)	3372	3030	340122
12	19.3	4.7	2.2	chr1	229365413	229365455	(19590967)	+	(AAGCAGG)n	Simple_repeat	1	45	(0)	340123
2178	12.9	11.0	2.1	chr1	229365609	229365997	(19590425)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	340124
3005	11.6	0.2	1.6	chr1	229366001	229366445	(19589977)	C	L1PB3	LINE/L1	(0)	6154	5716	340125
1535	25.2	7.8	3.4	chr1	230448479	230449010	(18507412)	C	L1MC4	LINE/L1	(1020)	7022	6459	341889
3911	20.9	6.6	7.8	chr1	230449298	230450737	(18505685)	+	Zaphod2	DNA/hAT-Tip100	2096	3516	(8)	341892
737	32.1	9.6	5.5	chr1	230935196	230936141	(18020281)	C	L2c	LINE/L2	(0)	3387	2398	342642
18	18.6	3.3	4.8	chr1	230978506	230978565	(17977857)	+	(GCC)n	Simple_repeat	1	62	(0)	342719
13	21.0	0.0	4.8	chr1	230978606	230978647	(17977775)	+	(GCC)n	Simple_repeat	1	42	(0)	342719
15	17.6	0.0	0.0	chr1	230978633	230978664	(17977758)	+	(CTG)n	Simple_repeat	1	32	(0)	342720
29	21.2	3.6	1.2	chr1	230978735	230978817	(17977605)	+	(CAG)n	Simple_repeat	1	86	(0)	342721
194	22.9	4.8	1.9	chr1	231047186	231047791	(17908631)	+	(TCCT)n	Simple_repeat	1	635	(0)	342821
1583	27.5	10.0	7.8	chr1	231085327	231086306	(17870116)	C	L1M5	LINE/L1	(867)	5279	4287	342887
1576	23.5	16.4	0.6	chr1	231360635	231361339	(17595083)	+	HAL1	LINE/L1	1042	1880	(627)	343366
339	27.2	0.0	3.5	chr1	231361585	231361725	(17594697)	+	HAL1	LINE/L1	2272	2407	(100)	343366
2221	9.9	2.6	0.0	chr1	231361769	231362062	(17594360)	C	AluSz	SINE/Alu	(9)	303	2	343367
32	25.9	2.2	5.6	chr1	231799832	231799970	(17156452)	+	(CTTTC)n	Simple_repeat	1	142	(0)	344086
342	22.1	8.6	7.3	chr1	232004601	232004737	(16951685)	+	L1MDa	LINE/L1	5748	5886	(699)	344364
129	22.8	0.4	0.4	chr1	232004826	232005104	(16951318)	+	(TCCC)n	Simple_repeat	1	280	(0)	344369
49	24.3	0.0	0.0	chr1	233134560	233134676	(15821746)	+	G-rich	Low_complexity	1	117	(0)	345929
513	27.7	12.8	4.8	chr1	233543522	233543732	(15412690)	C	LTR79	LTR/ERVL	(217)	310	96	346559
483	26.8	9.0	5.0	chr1	233544037	233544234	(15412188)	+	MIR	SINE/MIR	1	213	(17)	346561
51	8.6	1.3	0.0	chr1	233948181	233948256	(15008166)	+	(AGAG)n	Simple_repeat	1	77	(0)	347144
120	26.9	3.0	1.0	chr1	234164078	234164449	(14791973)	+	(CTCT)n	Simple_repeat	1	383	(0)	347460
30	23.0	1.4	0.0	chr1	234675663	234675736	(14280686)	+	(TGTG)n	Simple_repeat	1	75	(0)	348263
13	19.1	0.0	0.0	chr1	234675777	234675806	(14280616)	+	(CAG)n	Simple_repeat	1	30	(0)	348264
692	30.9	10.8	6.2	chr1	234675975	234676570	(14279852)	+	L1ME3A	LINE/L1	143	769	(5727)	348265
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
2494	8.2	0.0	0.0	chr1	234737617	234737920	(14218502)	+	AluSg	SINE/Alu	1	304	(6)	348353
30	7.9	5.6	0.0	chr1	234738030	234738083	(14218339)	+	(GAGAGAG)n	Simple_repeat	1	57	(0)	348354
27	15.5	3.9	3.8	chr1	234738084	234738097	(14218325)	+	GA-rich	Low_complexity	28	80	(0)	348355
1826	15.8	4.6	0.7	chr1	235296469	235296759	(13659663)	C	AluJb	SINE/Alu	(9)	303	1	349429
57	5.4	1.3	0.0	chr1	235296788	235296865	(13659557)	+	(AAGG)n	Simple_repeat	1	79	(0)	349430
4087	22.8	7.9	7.4	chr1	235296869	235298289	(13658133)	+	L1MC5a	LINE/L1	1331	2759	(18)	349424
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
54	25.2	0.8	0.0	chr1	236998869	236998995	(11957427)	+	GA-rich	Low_complexity	1	128	(0)	352612
2156	7.3	3.2	1.1	chr1	236999034	236999308	(11957114)	+	AluSz	SINE/Alu	2	282	(30)	352613
109	0.0	0.0	1.0	chr1	237883634	237883733	(11072689)	+	(GGGGGAGGGC)n	Simple_repeat	1	100	(0)	353922
629	28.7	2.7	0.0	chr1	237883818	237883960	(11072462)	+	AluJb	SINE/Alu	137	283	(29)	353923
654	27.1	13.6	1.1	chr1	239411805	239412184	(9544238)	C	HAL1	LINE/L1	(33)	2474	2040	356082
24	26.3	3.8	3.6	chr1	239412230	239412348	(9544074)	+	(CTTT)n	Simple_repeat	1	119	(0)	356083
306	22.9	1.0	17.9	chr1	239412354	239412470	(9543952)	C	HAL1	LINE/L1	(607)	1900	1804	356082
268	33.0	7.8	2.5	chr1	239412500	239412620	(9543802)	+	MIR	SINE/MIR	115	242	(20)	356084
575	26.0	11.7	0.4	chr1	239636925	239637183	(9319239)	C	Charlie17	DNA/hAT-Charlie	(34)	2882	2591	356435
33	12.3	0.0	0.0	chr1	240092724	240092785	(8863637)	+	(GCA)n	Simple_repeat	1	62	(0)	357138
847	25.9	9.8	9.5	chr1	241133218	241133839	(7822583)	+	L1MC5a	LINE/L1	905	1528	(1249)	358799
28	19.7	0.0	0.0	chr1	241133911	241133969	(7822453)	+	GA-rich	Low_complexity	1	59	(0)	358800
383	25.9	7.8	9.6	chr1	241134004	241134066	(7822356)	+	L1MC5	LINE/L1	8629	8691	(613)	358801
781	22.2	9.6	3.1	chr1	241134067	241134261	(7822161)	C	MER3	DNA/hAT-Charlie	(0)	209	1	358802
383	25.9	7.8	9.6	chr1	241134262	241134406	(7822016)	+	L1MC5	LINE/L1	8692	8833	(471)	358801
226	18.2	3.8	0.6	chr1	241674826	241675343	(7281079)	+	(CCTT)n	Simple_repeat	1	534	(0)	359649
1103	22.8	1.4	0.0	chr1	241988946	241989164	(6967258)	C	MER58A	DNA/hAT-Charlie	(0)	224	3	360278
72	0.0	4.0	0.0	chr1	242017629	242017703	(6938719)	+	(AAAAT)n	Simple_repeat	1	78	(0)	360337
404	25.3	1.2	0.0	chr1	242228447	242228529	(6727893)	+	MLT1O	LTR/ERVL-MaLR	115	198	(344)	360654
35	17.4	0.0	0.0	chr1	242228646	242228712	(6727710)	+	GA-rich	Low_complexity	1	67	(0)	360655
27	0.0	3.5	0.0	chr1	242228715	242228743	(6727679)	+	(AGAGGA)n	Simple_repeat	1	30	(0)	360656
323	26.9	9.5	4.3	chr1	243253352	243253491	(5702931)	+	MIRb	SINE/MIR	2	149	(119)	362299
4090	22.3	6.6	2.0	chr1	244263158	244263344	(4693078)	+	L1M5	LINE/L1	3519	3733	(2413)	363845
52	27.4	2.0	0.0	chr1	244263349	244263495	(4692927)	+	GA-rich	Low_complexity	1	150	(0)	363847
377	20.0	0.0	4.3	chr1	244263509	244263602	(4692820)	+	L1M5	LINE/L1	3750	3839	(2307)	363845
736	25.9	4.4	4.7	chr1	244263612	244263907	(4692515)	+	L1MC4	LINE/L1	7748	8042	(0)	363848
38	14.5	0.0	0.0	chr1	244273062	244273122	(4683300)	+	(T)n	Simple_repeat	1	61	(0)	363870
517	33.2	4.5	2.1	chr1	244273337	244273573	(4682849)	+	MIRc	SINE/MIR	8	250	(18)	363871
1793	16.7	7.6	0.0	chr1	244665526	244665854	(4290568)	+	MLT2D	LTR/ERVL	1	356	(58)	364526
1258	27.2	12.4	2.2	chr1	244665908	244666449	(4289973)	+	L2c	LINE/L2	1187	1791	(1628)	364527
50	28.2	2.6	3.0	chr1	244952396	244952583	(4003839)	+	A-rich	Low_complexity	4	190	(0)	365146
2285	7.8	5.5	0.0	chr1	245261135	245261429	(3694993)	C	AluSp	SINE/Alu	(0)	313	2	365756
80	21.7	0.7	8.4	chr1	245261430	245261574	(3694848)	+	(CTTC)n	Simple_repeat	2	129	(0)	365757
1950	17.2	0.7	0.0	chr1	245261579	245261881	(3694541)	C	AluJo	SINE/Alu	(6)	306	2	365758
1484	22.8	2.2	0.0	chr1	246391105	246391376	(2565046)	+	AluJr4	SINE/Alu	2	279	(33)	367371
70	17.1	2.3	0.0	chr1	246391378	246391508	(2564914)	+	GA-rich	Low_complexity	1	134	(0)	367372
638	20.1	10.7	0.0	chr1	246391512	246391695	(2564727)	+	L1MB8	LINE/L1	2202	2407	(3739)	367373
283	28.9	3.5	1.2	chr10	199141	199224	(133598198)	C	L1MEg	LINE/L1	(5998)	86	1	371270
23	31.0	0.0	1.4	chr10	199225	199274	(133598148)	+	(CT)n	Simple_repeat	1	50	(0)	371271
45	6.8	0.0	1.6	chr10	199275	199338	(133598084)	+	(TCCC)n	Simple_repeat	1	64	(0)	371272
23	31.0	0.0	1.4	chr10	199339	199358	(133598064)	+	(CT)n	Simple_repeat	1	20	(0)	371273
240	27.2	11.1	5.1	chr10	199382	199447	(133597975)	C	L1M5	LINE/L1	(213)	5911	5843	371274
125	31.0	2.7	0.9	chr10	1292944	1293381	(132504041)	+	GA-rich	Low_complexity	1	450	(0)	372456
332	25.1	8.7	0.0	chr10	1668115	1668278	(132129144)	+	MER67D	LTR/ERV1	274	514	(0)	372803
298	35.5	0.9	2.7	chr10	1668325	1668544	(132128878)	+	Tigger15a	DNA/TcMar-Tigger	69	284	(431)	372804
110	37.9	0.9	3.5	chr10	2987142	2987716	(130809706)	+	(TTTC)n	Simple_repeat	1	580	(0)	374461
92	19.6	1.5	0.5	chr10	3047718	3047914	(130749508)	+	(CTCT)n	Simple_repeat	1	200	(0)	374551
650	24.1	4.8	3.8	chr10	3396935	3397119	(130400303)	+	MLT1B	LTR/ERVL-MaLR	1	187	(187)	375037
41	21.9	1.1	0.0	chr10	3397120	3397212	(130400210)	+	(TCTC)n	Simple_repeat	1	94	(0)	375038
760	24.6	0.7	0.4	chr10	3397216	3397412	(130400010)	+	MLT1B	LTR/ERVL-MaLR	173	383	(7)	375037
11	19.6	10.0	1.5	chr10	5977342	5977401	(127820021)	+	(CCAGCTC)n	Simple_repeat	1	66	(0)	378667
15	15.3	0.0	0.0	chr10	5977417	5977445	(127819977)	+	(GCA)n	Simple_repeat	1	29	(0)	378668
204	22.8	0.2	1.9	chr10	6646718	6647121	(127150301)	+	(CTCC)n	Simple_repeat	1	399	(0)	379828
73	2.5	2.5	0.0	chr10	6647122	6647202	(127150220)	+	(TCTTTCTT)n	Simple_repeat	1	83	(0)	379829
204	22.8	0.2	1.9	chr10	6647203	6647266	(127150156)	+	(CTCC)n	Simple_repeat	4	65	(0)	379830
456	21.7	1.9	0.0	chr10	6647267	6647372	(127150050)	C	MLT2D	LTR/ERVL	(274)	140	33	379831
191	18.2	1.7	1.9	chr10	6778646	6779053	(127018369)	+	GA-rich	Low_complexity	1	415	(0)	380058
49	2.0	1.9	1.8	chr10	7135956	7136009	(126661413)	+	(TC)n	Simple_repeat	1	55	(0)	380598
190	22.8	1.7	6.6	chr10	8356709	8356769	(125440653)	C	L2a	LINE/L2	(0)	3426	3369	382589
7153	10.0	2.7	10.2	chr10	9272536	9274033	(124523389)	C	SVA_B	Retroposon/SVA	(0)	1383	2	384011
24	17.0	2.2	0.0	chr10	9274039	9274084	(124523338)	+	GA-rich	Low_complexity	1	47	(0)	384012
237	4.2	0.0	1.4	chr10	9274086	9274157	(124523265)	C	SVA_F	Retroposon/SVA	(1304)	71	1	384011
1975	21.8	5.5	2.8	chr10	9274262	9274612	(124522810)	+	L1MA10	LINE/L1	5820	6185	(149)	384013
182	14.8	3.0	1.8	chr10	10483842	10483876	(123313546)	+	(CCTC)n	Simple_repeat	1	33	(0)	385701
59	4.8	0.0	7.0	chr10	10483877	10483976	(123313446)	+	(TC)n	Simple_repeat	1	100	(0)	385702
182	14.8	3.0	1.8	chr10	10483977	10484310	(123313112)	+	(CCTC)n	Simple_repeat	2	342	(0)	385703
2160	11.7	0.0	0.0	chr10	10484343	10484616	(123312806)	C	AluSz	SINE/Alu	(38)	274	1	385704
445	25.1	18.2	4.6	chr10	10791732	10791948	(123005474)	+	MER5C	DNA/hAT-Charlie	24	276	(37)	386110
58	15.8	5.6	2.0	chr10	10791949	10792092	(123005330)	+	GA-rich	Low_complexity	1	152	(0)	386111
15	0.0	4.5	0.0	chr10	10792200	10792221	(123005201)	+	(AATC)n	Simple_repeat	1	23	(0)	386112
7387	24.7	5.6	7.8	chr10	10901834	10902763	(122894659)	+	L1ME1	LINE/L1	5227	6167	(12)	386263
71	23.1	0.0	6.5	chr10	10902765	10903021	(122894401)	+	G-rich	Low_complexity	1	240	(0)	386267
82	24.6	5.2	4.5	chr10	11107714	11108115	(122689307)	+	(TCTCCCT)n	Simple_repeat	1	423	(0)	386519
582	30.3	6.9	3.2	chr10	11108192	11108566	(122688856)	C	L1ME5	LINE/L1	(137)	6057	5668	386520
911	25.1	10.3	1.1	chr10	11108611	11108965	(122688457)	C	L1M5	LINE/L1	(586)	5608	5220	386521
206	21.0	1.6	8.8	chr10	11539777	11539844	(122257578)	C	L2c	LINE/L2	(8)	3379	3317	387026
862	25.4	3.7	3.3	chr10	11539790	11540029	(122257393)	C	MIR	SINE/MIR	(14)	248	8	387027
137	23.0	3.0	4.7	chr10	12568071	12568542	(121228880)	+	(CCTC)n	Simple_repeat	1	486	(0)	389178
283	19.6	0.4	0.5	chr10	12622977	12623529	(121173893)	+	(CCCT)n	Simple_repeat	1	555	(0)	389287
2073	23.7	5.4	5.6	chr10	12956777	12957405	(120840017)	+	MER67B	LTR/ERV1	34	661	(0)	389866
20	13.7	3.1	7.5	chr10	12957452	12957478	(120839944)	+	A-rich	Low_complexity	1	24	(0)	389867
2296	18.6	1.9	2.1	chr10	12957479	12957833	(120839589)	+	MSTA	LTR/ERVL-MaLR	2	364	(64)	389868
14	7.6	7.1	0.0	chr10	13099324	13099351	(120698071)	+	(GTT)n	Simple_repeat	1	30	(0)	390107
62	10.8	1.9	0.9	chr10	13099351	13099454	(120697968)	+	(TCCC)n	Simple_repeat	1	106	(0)	390108
46	17.1	0.0	0.0	chr10	14068855	14068937	(119728485)	+	(TCTC)n	Simple_repeat	1	83	(0)	391869
234	34.8	5.7	7.2	chr10	14349530	14349724	(119447698)	C	UCON105	Unknown	(10)	263	72	392299
2764	11.2	3.5	13.1	chr10	14349847	14350349	(119447073)	C	MLT2A2	LTR/ERVL	(0)	453	1	392300
1535	12.2	2.1	0.0	chr10	14414087	14414316	(119383106)	+	L1MA2	LINE/L1	6070	6304	(0)	392415
41	26.1	1.1	6.5	chr10	14414317	14414467	(119382955)	+	GA-rich	Low_complexity	31	171	(0)	392416
1035	9.2	0.0	0.0	chr10	14414468	14414608	(119382814)	+	L1MA9	LINE/L1	6171	6311	(1)	392413
1111	19.3	3.8	1.0	chr10	14414672	14414875	(119382547)	C	MER6B	DNA/TcMar-Tigger	(0)	210	1	392417
335	15.8	0.2	0.8	chr10	14825971	14826550	(118970872)	+	GA-rich	Low_complexity	14	591	(0)	393137
1011	25.6	7.8	7.2	chr10	15058400	15058871	(118738551)	C	L1MEc	LINE/L1	(4286)	2114	1640	393542
146	17.7	0.3	2.4	chr10	15058918	15059213	(118738209)	+	(CCCT)n	Simple_repeat	1	297	(0)	393544
1757	14.8	1.5	1.1	chr10	15059215	15059485	(118737937)	C	AluJb	SINE/Alu	(39)	273	2	393545
80	25.1	2.2	2.8	chr10	15434269	15434586	(118362836)	+	(TC)n	Simple_repeat	1	316	(0)	394253
48	0.0	0.0	0.0	chr10	15434587	15434627	(118362795)	+	(CA)n	Simple_repeat	1	41	(0)	394254
397	35.0	7.6	8.8	chr10	16259778	16260317	(117537105)	+	L2b	LINE/L2	2832	3360	(15)	395468
174	26.5	1.0	2.2	chr10	16260347	16260842	(117536580)	+	G-rich	Low_complexity	1	501	(0)	395469
347	32.5	6.0	0.0	chr10	17640095	17640251	(116157171)	+	L2a	LINE/L2	3260	3426	(0)	397797
246	37.4	5.1	3.3	chr10	17640246	17640358	(116157064)	C	L2c	LINE/L2	(547)	2872	2755	397796
1631	24.6	1.9	2.1	chr10	17640359	17640732	(116156690)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	2	397798
246	37.4	5.1	3.3	chr10	17640733	17640828	(116156594)	C	L2c	LINE/L2	(665)	2754	2659	397796
358	38.0	2.1	0.0	chr10	18886159	18886300	(114911122)	C	MIR3	SINE/MIR	(11)	197	53	399799
8018	22.0	3.1	6.4	chr10	19188897	19191715	(114605707)	+	L1MB1	LINE/L1	3116	5867	(322)	400236
2856	5.3	0.6	0.3	chr10	19698844	19699203	(114098219)	+	L1PA8	LINE/L1	5794	6154	(18)	400970
26	0.0	0.0	0.0	chr10	19699204	19699228	(114098194)	+	(ATA)n	Simple_repeat	1	25	(0)	400971
56	0.0	0.0	0.0	chr10	19699278	19699328	(114098094)	+	(GAAAGGAGG)n	Simple_repeat	1	51	(0)	400972
35	21.5	4.8	0.9	chr10	19877162	19877266	(113920156)	+	GA-rich	Low_complexity	1	110	(0)	401252
602	30.8	13.5	3.6	chr10	19877356	19877766	(113919656)	+	MLT1J	LTR/ERVL-MaLR	6	463	(49)	401253
1823	17.6	0.0	0.7	chr10	21326916	21327216	(112470206)	+	AluJr	SINE/Alu	1	299	(13)	403420
269	14.3	0.0	0.0	chr10	21329807	21329848	(112467574)	C	L1MB3	LINE/L1	(744)	5439	5398	403423
2023	14.2	0.3	3.5	chr10	21330184	21330500	(112466922)	+	AluJr	SINE/Alu	2	308	(4)	403427
2060	12.3	0.0	4.2	chr10	22271053	22271360	(111526062)	+	AluJr	SINE/Alu	6	300	(12)	405023
1382	26.5	5.7	8.8	chr10	22271503	22272081	(111525341)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	405024
382	23.9	0.7	2.8	chr10	23010098	23011095	(110786327)	+	(TTCCC)n	Simple_repeat	1	1005	(0)	406122
272	33.3	1.8	5.3	chr10	23011108	23011221	(110786201)	+	L2a	LINE/L2	3292	3401	(25)	406123
398	17.8	8.2	0.0	chr10	23063443	23063532	(110733890)	C	UCON11	DNA/TcMar-Tigger	(168)	270	173	406213
12	16.9	2.9	2.8	chr10	23095584	23095618	(110701804)	+	(GCGGC)n	Simple_repeat	1	36	(0)	406263
122	15.3	1.1	5.3	chr10	23286402	23286682	(110510740)	+	G-rich	Low_complexity	1	284	(0)	406554
905	21.1	3.0	5.4	chr10	23366202	23366406	(110431016)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	191	406707
48	15.4	0.0	0.0	chr10	23366414	23366493	(110430929)	+	GA-rich	Low_complexity	1	80	(0)	406708
1839	12.5	5.3	2.7	chr10	23366532	23366827	(110430595)	C	AluJr	SINE/Alu	(7)	305	2	406709
230	33.8	0.0	2.4	chr10	24902341	24902422	(108895000)	+	MamSINE1	SINE/tRNA-RTE	78	157	(133)	409362
207	37.2	6.6	2.6	chr10	24978066	24978181	(108819241)	C	MamRTE1	LINE/RTE-BovB	(55)	3757	3637	409492
50	7.0	8.5	0.0	chr10	24978409	24978514	(108818908)	+	(TC)n	Simple_repeat	1	115	(0)	409493
318	38.3	1.4	0.7	chr10	24978815	24978956	(108818466)	C	MIR3	SINE/MIR	(3)	205	63	409494
2399	11.8	0.3	0.0	chr10	25114568	25114871	(108682551)	C	AluSx1	SINE/Alu	(7)	305	1	409718
237	27.2	3.2	10.7	chr10	25114899	25115001	(108682421)	+	L2c	LINE/L2	3268	3362	(25)	409719
241	12.3	0.0	0.8	chr10	25115104	25115483	(108681939)	+	(TCCC)n	Simple_repeat	1	380	(0)	409720
712	30.6	6.7	1.1	chr10	25726078	25726345	(108071077)	C	MamRep1527	LTR	(0)	969	686	410573
63	34.0	1.5	4.2	chr10	25726371	25726579	(108070843)	+	(TCTT)n	Simple_repeat	1	203	(0)	410574
2760	11.6	0.6	0.0	chr10	25726580	25726941	(108070481)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	410575
275	34.7	1.7	5.5	chr10	26317922	26318104	(107479318)	C	MLT1O	LTR/ERVL-MaLR	(364)	178	3	411429
244	28.6	14.1	2.8	chr10	26318169	26318312	(107479110)	C	L2a	LINE/L2	(0)	3426	3264	411430
1162	14.9	0.0	0.5	chr10	26318321	26318515	(107478907)	+	L1MA6	LINE/L1	6107	6300	(0)	411431
58	13.0	3.5	1.7	chr10	26318518	26318633	(107478789)	+	GA-rich	Low_complexity	1	120	(0)	411432
107	36.3	1.9	2.8	chr10	27752972	27753498	(106043924)	+	(TCCC)n	Simple_repeat	1	537	(0)	413928
1103	14.1	11.6	0.5	chr10	28691344	28691542	(105105880)	+	MSTA	LTR/ERVL-MaLR	1	224	(204)	415567
76	18.1	6.0	1.8	chr10	28691544	28691759	(105105663)	+	(CCTC)n	Simple_repeat	1	225	(0)	415568
1086	11.5	2.4	10.0	chr10	28691760	28691978	(105105444)	+	MSTA	LTR/ERVL-MaLR	176	381	(0)	415567
233	22.8	3.9	4.5	chr10	29918991	29919542	(103877880)	+	(CCT)n	Simple_repeat	1	551	(0)	417715
2280	11.2	0.0	0.0	chr10	29919543	29919838	(103877584)	C	AluSx1	SINE/Alu	(15)	297	2	417716
859	16.0	1.4	0.7	chr10	29982771	29982915	(103814507)	C	MER5A	DNA/hAT-Charlie	(43)	146	1	417838
210	20.8	1.5	0.8	chr10	29982918	29983173	(103814249)	+	GA-rich	Low_complexity	1	261	(0)	417839
3396	14.1	5.5	0.2	chr10	29983174	29983742	(103813680)	C	LTR26	LTR/ERV1	(0)	603	3	417840
210	20.8	1.5	0.8	chr10	29983743	29983947	(103813475)	+	GA-rich	Low_complexity	262	464	(0)	417841
423	30.6	2.9	1.5	chr10	30122349	30122484	(103674938)	C	MIRc	SINE/MIR	(129)	139	2	418088
2368	4.3	0.0	0.7	chr10	30122791	30123068	(103674354)	+	AluY	SINE/Alu	31	306	(5)	418089
95	24.3	0.0	5.0	chr10	30499718	30500000	(103297422)	+	GA-rich	Low_complexity	1	283	(0)	418831
100	18.5	1.6	3.6	chr10	30500001	30500243	(103297179)	+	GA-rich	Low_complexity	1	247	(0)	418832
17	0.0	0.0	0.0	chr10	32446883	32446904	(101350518)	+	(TGCC)n	Simple_repeat	1	22	(0)	422005
47	6.2	1.4	2.7	chr10	32446905	32446977	(101350445)	+	(CCTC)n	Simple_repeat	1	74	(0)	422006
848	28.6	9.7	3.2	chr10	32447011	32447415	(101350007)	+	L2	LINE/L2	1764	2197	(1222)	422007
126	38.8	1.7	2.0	chr10	35469563	35470366	(98327056)	+	(GACA)n	Simple_repeat	1	818	(0)	426626
13	25.9	0.0	2.3	chr10	35643358	35643400	(98154022)	+	(GCC)n	Simple_repeat	1	43	(0)	426872
12	19.9	2.9	0.0	chr10	35643412	35643446	(98153976)	+	G-rich	Low_complexity	1	36	(0)	426873
60	27.1	6.0	0.0	chr10	35643632	35643847	(98153575)	+	(TC)n	Simple_repeat	1	229	(0)	426874
1266	15.3	0.2	0.0	chr10	42321688	42322914	(91474508)	+	ALR/Alpha	Satellite/centr	1	1228	(0)	431942
332	1.7	9.5	0.2	chr10	44765395	44765877	(89031545)	+	(TC)n	Simple_repeat	1	529	(0)	435217
8498	17.5	2.2	4.0	chr10	46992423	46993585	(86803837)	C	L1P4a	LINE/L1	(4719)	2216	1041	438556
1213	17.6	23.1	0.6	chr10	47189286	47189639	(86607783)	C	MER31B	LTR/ERV1	(8)	458	1	438838
233	36.3	5.7	5.7	chr10	47303856	47304153	(86493269)	C	L2c	LINE/L2	(5)	3382	3085	439013
42	24.2	3.4	2.2	chr10	47304337	47304452	(86492970)	+	GA-rich	Low_complexity	1	117	(0)	439014
357	24.0	4.3	6.8	chr10	47304453	47304644	(86492778)	C	L1ME4a	LINE/L1	(10)	6114	5928	439015
30	24.5	3.3	1.1	chr10	49329526	49329617	(84467805)	+	(CCTT)n	Simple_repeat	1	95	(0)	441750
318	25.9	13.2	0.0	chr10	49329618	49329729	(84467693)	C	L2b	LINE/L2	(9)	3366	3238	441751
204	24.6	2.5	0.0	chr10	49403423	49403934	(84393488)	+	(CTCT)n	Simple_repeat	1	525	(0)	441840
1344	28.9	6.9	10.7	chr10	50453438	50453697	(83343725)	+	L1ME4a	LINE/L1	972	1236	(5867)	443374
92	14.6	0.6	2.3	chr10	50453737	50453908	(83343514)	+	G-rich	Low_complexity	1	173	(0)	443376
316	26.7	6.5	0.0	chr10	50453930	50454015	(83343407)	+	L1ME4a	LINE/L1	1310	1401	(5702)	443374
23	13.0	0.0	0.0	chr10	50454051	50454085	(83343337)	+	(A)n	Simple_repeat	1	35	(0)	443377
205	32.5	3.4	7.1	chr10	50454120	50454301	(83343121)	C	L2	LINE/L2	(414)	3005	2831	443378
2101	13.6	0.3	1.9	chr10	52831773	52832089	(80965333)	+	AluSz	SINE/Alu	1	312	(0)	446821
14989	16.5	3.0	1.6	chr10	52832090	52833974	(80963448)	+	L1MA4	LINE/L1	5334	7208	(511)	446819
11	12.0	4.8	6.8	chr10	55631532	55631573	(78165849)	+	(GCTCCT)n	Simple_repeat	1	44	(0)	450427
271	36.7	3.7	5.4	chr10	56028262	56028483	(77768939)	+	MIR	SINE/MIR	2	219	(43)	450931
304	24.6	11.0	2.3	chr10	56028489	56028621	(77768801)	C	MER67C	LTR/ERV1	(4)	510	365	450932
1494	20.1	4.8	5.3	chr10	56028641	56029067	(77768355)	C	MER67C	LTR/ERV1	(306)	405	1	450932
1168	23.8	7.4	10.2	chr10	58144859	58145036	(75652386)	+	MLT1B	LTR/ERVL-MaLR	1	184	(206)	453698
38	8.8	1.6	1.6	chr10	58145037	58145099	(75652323)	+	(TC)n	Simple_repeat	1	64	(0)	453699
1168	23.8	7.4	10.2	chr10	58145100	58145322	(75652100)	+	MLT1B	LTR/ERVL-MaLR	185	390	(0)	453698
2118	27.2	12.9	5.9	chr10	58261112	58261582	(75535840)	+	L1MC4	LINE/L1	5812	6298	(1584)	453868
2002	10.3	6.7	0.0	chr10	58261583	58261863	(75535559)	C	AluSg	SINE/Alu	(9)	301	1	453873
26	0.0	0.0	0.0	chr10	60141562	60141586	(73655836)	+	(T)n	Simple_repeat	1	25	(0)	456642
229	30.9	10.9	5.4	chr10	60305514	60305643	(73491779)	C	Plat_L3	LINE/CR1	(259)	3327	3190	456875
222	24.1	2.5	3.2	chr10	61491056	61491723	(72305699)	+	A-rich	Low_complexity	1	685	(0)	458652
209	25.3	3.5	8.8	chr10	62009835	62009925	(71787497)	C	L2a	LINE/L2	(227)	3160	3075	459411
18	23.5	0.0	0.0	chr10	62374408	62374452	(71422970)	+	(GCA)n	Simple_repeat	1	45	(0)	459964
387	24.7	7.6	0.0	chr10	62754945	62755029	(71042393)	+	L2a	LINE/L2	3311	3402	(24)	460571
132	21.8	2.6	1.7	chr10	62755039	62755381	(71042041)	+	GA-rich	Low_complexity	1	352	(0)	460572
498	24.6	1.7	0.0	chr10	62755399	62755512	(71041910)	+	MIR	SINE/MIR	114	229	(33)	460573
473	26.0	4.8	13.4	chr10	63831957	63832254	(69965168)	+	MLT1J	LTR/ERVL-MaLR	99	369	(143)	462486
677	14.0	1.4	6.2	chr10	63832278	63832422	(69965000)	C	MER31B	LTR/ERV1	(0)	466	329	462487
841	17.6	0.8	0.0	chr10	63832423	63832553	(69964869)	+	AluJb	SINE/Alu	1	132	(180)	462488
921	15.2	2.1	4.2	chr10	63832554	63832868	(69964554)	C	MER31B	LTR/ERV1	(121)	345	1	462487
345	27.8	8.9	6.5	chr10	63873092	63873340	(69924082)	+	L2a	LINE/L2	3134	3420	(6)	462547
2263	11.1	0.0	0.0	chr10	64373818	64374106	(69423316)	+	AluSg	SINE/Alu	1	289	(21)	463288
264	27.0	5.3	0.0	chr10	64374107	64374195	(69423227)	C	HAL1ME	LINE/L1	(1380)	1085	992	463289
2465	7.0	0.3	0.3	chr10	65051138	65051435	(68745987)	C	AluY	SINE/Alu	(13)	298	1	464228
46	2.7	2.2	8.5	chr10	65051607	65051698	(68745724)	+	(CTCTCC)n	Simple_repeat	1	94	(0)	464229
9203	3.5	11.6	0.9	chr10	65051699	65052931	(68744491)	+	SVA_C	Retroposon/SVA	1	1382	(2)	464230
1914	19.7	9.9	5.3	chr10	66080620	66081108	(67716314)	C	MER67D	LTR/ERV1	(0)	514	1	465595
33	19.7	1.1	5.3	chr10	67573680	67573773	(66223649)	+	(TCCT)n	Simple_repeat	1	95	(0)	467634
431	22.9	7.4	3.9	chr10	67574213	67574394	(66223028)	C	HAL1ME	LINE/L1	(147)	2318	2130	467635
3654	13.5	4.5	0.2	chr10	67591895	67592482	(66204940)	+	LTR27D	LTR/ERV1	1	615	(0)	467647
1881	25.7	5.0	4.2	chr10	67592483	67592693	(66204729)	+	L1MEg	LINE/L1	1195	1384	(4700)	467646
248	29.4	9.9	0.9	chr10	69803699	69803808	(63993614)	+	MIRb	SINE/MIR	5	125	(143)	472290
1737	15.5	10.8	1.5	chr10	71635763	71636090	(62161332)	C	MLT1A0	LTR/ERVL-MaLR	(3)	362	1	475649
1862	13.3	4.4	0.7	chr10	71636238	71636522	(62160900)	+	AluJo	SINE/Alu	1	296	(16)	475650
19443	13.7	4.8	5.6	chr10	71939839	71943821	(61853601)	+	Harlequin-int	LTR/ERV1	1	3949	(2947)	476248
280	29.9	5.0	3.0	chr10	71975854	71975993	(61821429)	C	MIRc	SINE/MIR	(80)	188	43	476275
2345	9.3	0.3	0.0	chr10	72291979	72292279	(61505143)	+	AluSp	SINE/Alu	1	302	(11)	476973
295	33.7	6.5	2.8	chr10	72292714	72292890	(61504532)	+	L2b	LINE/L2	3181	3364	(11)	476974
204	24.5	15.9	3.6	chr10	72292887	72292996	(61504426)	+	MIR1_Amn	SINE/MIR	24	149	(81)	476975
11792	5.8	3.0	3.9	chr10	72300429	72302020	(61495402)	+	LTR12C	LTR/ERV1	3	1579	(0)	476997
731	24.4	4.0	12.5	chr10	72302021	72302203	(61495219)	+	L1ME3A	LINE/L1	5904	6074	(99)	476996
2276	12.0	0.0	0.3	chr10	72302204	72302511	(61494911)	C	AluSg	SINE/Alu	(3)	307	1	476998
22423	6.5	1.8	0.2	chr10	73021589	73027607	(60769815)	+	L1PA6	LINE/L1	246	6324	(3)	478461
108	25.8	1.4	1.3	chr10	73027609	73027905	(60769517)	+	GA-rich	Low_complexity	1	301	(0)	478462
256	20.9	10.2	2.7	chr10	73027946	73028028	(60769394)	+	L2c	LINE/L2	3274	3383	(4)	478463
1860	14.8	5.8	0.0	chr10	74025347	74025623	(59771799)	+	AluJb	SINE/Alu	1	294	(18)	480418
57	12.4	2.0	1.0	chr10	74025630	74025730	(59771692)	+	G-rich	Low_complexity	1	103	(0)	480419
422	24.2	10.3	4.3	chr10	74025766	74025784	(59771638)	+	MIR	SINE/MIR	74	90	(172)	480420
3492	11.6	16.8	0.7	chr10	74025785	74026394	(59771028)	C	LTR9A1	LTR/ERV1	(0)	728	1	480421
212	22.9	0.0	12.5	chr10	74051667	74051746	(59745676)	+	MIR	SINE/MIR	149	218	(44)	480480
2588	17.3	1.4	3.4	chr10	74051772	74052267	(59745155)	C	MER66B	LTR/ERV1	(0)	486	1	480481
17	15.6	0.0	0.0	chr10	75019761	75019789	(58777633)	+	(T)n	Simple_repeat	1	29	(0)	482278
1950	16.6	2.2	6.3	chr10	75615983	75616234	(58181188)	C	THE1B	LTR/ERVL-MaLR	(0)	364	122	483360
45	4.2	0.0	0.0	chr10	75616235	75616284	(58181138)	+	(AGC)n	Simple_repeat	1	50	(0)	483361
1950	16.6	2.2	6.3	chr10	75616285	75616411	(58181011)	C	THE1B	LTR/ERVL-MaLR	(243)	121	1	483360
472	18.6	1.0	1.0	chr10	75616417	75616519	(58180903)	+	MER113	DNA/hAT-Charlie	409	511	(10)	483362
27	15.1	3.9	0.0	chr10	75713817	75713868	(58083554)	+	(TC)n	Simple_repeat	1	54	(0)	483499
58	0.0	0.0	0.0	chr10	75973022	75973073	(57824349)	+	(CAG)n	Simple_repeat	1	52	(0)	483872
678	25.0	2.5	5.9	chr10	75973090	75973293	(57824129)	C	MIRb	SINE/MIR	(28)	240	44	483873
27061	4.2	0.2	0.1	chr10	76142709	76148837	(57648585)	C	L1PA4	LINE/L1	(18)	6137	4	484112
879	23.4	5.5	3.8	chr10	76148882	76149147	(57648275)	C	L1M5	LINE/L1	(560)	5683	5413	484113
348	32.1	3.7	0.8	chr10	76149314	76149452	(57647970)	+	MIRc	SINE/MIR	13	152	(56)	484114
1598	21.0	8.6	2.0	chr10	78118501	78118936	(55678486)	+	MER31A	LTR/ERV1	1	533	(10)	487198
387	23.4	11.9	0.7	chr10	78118945	78119086	(55678336)	C	HAL1	LINE/L1	(1577)	930	771	487196
222	20.7	8.4	4.0	chr10	79347828	79347922	(54449500)	+	MIR3	SINE/MIR	81	175	(93)	489470
715	22.7	2.3	13.2	chr10	80404769	80405017	(53392405)	+	Kanga1	DNA/TcMar-Tc2	1346	1566	(179)	491169
275	27.6	41.7	1.8	chr10	80405144	80405315	(53392107)	+	MLT1L	LTR/ERVL-MaLR	366	606	(4)	491170
258	13.5	12.3	2.9	chr10	84602292	84603255	(49194167)	+	(CT)n	Simple_repeat	1	1083	(0)	497099
854	34.7	12.4	3.1	chr10	85556401	85557703	(48239719)	+	L2c	LINE/L2	1916	3382	(5)	498277
18	30.1	0.0	2.9	chr10	85557715	85557742	(48239680)	+	GA-rich	Low_complexity	1	28	(0)	498278
35	2.8	0.0	0.0	chr10	85557743	85557779	(48239643)	+	(AGGGAGAG)n	Simple_repeat	1	37	(0)	498279
18	30.1	0.0	2.9	chr10	85557780	85557818	(48239604)	+	GA-rich	Low_complexity	29	66	(0)	498280
612	35.5	7.1	1.7	chr10	85558001	85558410	(48239012)	+	MLT1J2	LTR/ERVL-MaLR	1	434	(14)	498281
785	29.2	4.3	7.0	chr10	85568441	85568946	(48228476)	C	L1MEf	LINE/L1	(4425)	1990	1500	498293
56	18.0	0.0	0.9	chr10	85568947	85569051	(48228371)	+	(CT)n	Simple_repeat	1	105	(0)	498295
281	18.7	1.6	1.0	chr10	85735777	85736352	(48061070)	+	GA-rich	Low_complexity	1	585	(0)	498504
7535	16.4	3.4	3.7	chr10	86782163	86783588	(47013834)	C	L1MB2	LINE/L1	(339)	5832	4418	500144
1475	15.8	13.7	0.0	chr10	86783589	86783847	(47013575)	C	AluJr4	SINE/Alu	(12)	300	1	500146
7535	19.5	5.5	3.3	chr10	86783848	86784944	(47012478)	C	L1MB2	LINE/L1	(1723)	4423	3206	500144
2051	28.8	7.0	3.6	chr10	88452348	88453115	(45344307)	+	ERV3-16A3_I-int	LTR/ERVL	4326	5121	(105)	502830
1272	27.7	4.5	1.8	chr10	88453175	88453612	(45343810)	+	LTR16A	LTR/ERVL	2	451	(0)	502831
16400	10.4	2.3	3.0	chr10	88690717	88691728	(45105694)	+	L1M1	LINE/L1	2436	3417	(4148)	503198
1056	28.1	7.0	8.1	chr10	89378271	89378751	(44418671)	C	LTR33	LTR/ERVL	(32)	483	9	504283
258	31.0	1.0	2.0	chr10	92387543	92387644	(41409778)	C	MER5B	DNA/hAT-Charlie	(0)	178	78	509002
674	17.6	14.5	0.8	chr10	92387673	92387797	(41409625)	+	AluJr	SINE/Alu	1	145	(167)	509003
2420	8.4	1.0	0.0	chr10	92387798	92388105	(41409317)	+	AluSx1	SINE/Alu	2	312	(0)	509004
274	29.5	2.2	1.1	chr10	93476669	93476757	(40320665)	C	MIRb	SINE/MIR	(93)	175	86	511196
2398	8.6	0.3	0.3	chr10	93477210	93477511	(40319911)	+	AluSq	SINE/Alu	1	302	(11)	511197
244	24.1	4.9	0.0	chr10	95229834	95229891	(38567531)	C	L1MC4	LINE/L1	(1117)	6765	6705	513926
1237	22.1	3.0	0.0	chr10	95230068	95230330	(38567092)	C	L1ME3	LINE/L1	(165)	5997	5727	513934
65	22.8	0.0	0.7	chr10	96789882	96790024	(37007398)	+	(TCCC)n	Simple_repeat	1	143	(0)	516693
44	22.0	1.4	5.5	chr10	96789980	96790028	(37007394)	+	(TTCT)n	Simple_repeat	1	48	(0)	516694
2401	10.4	0.0	0.0	chr10	96790029	96790336	(37007086)	C	AluSq2	SINE/Alu	(5)	308	1	516695
7615	18.9	5.6	5.2	chr10	96938246	96939682	(36857740)	+	L1M4b	LINE/L1	4706	6189	(817)	517009
24	20.4	0.0	1.7	chr10	97334505	97334562	(36462860)	+	(TCC)n	Simple_repeat	1	58	(0)	517742
15	22.1	2.0	2.0	chr10	97334636	97334684	(36462738)	+	(CGGAGC)n	Simple_repeat	1	50	(0)	517743
53	0.0	0.0	0.0	chr10	97840249	97840293	(35957129)	+	(AG)n	Simple_repeat	1	45	(0)	518854
15	18.4	2.0	3.9	chr10	98607016	98607054	(35190368)	+	(TTTTTC)n	Simple_repeat	1	39	(0)	520206
51	3.8	0.0	0.0	chr10	98607055	98607109	(35190313)	+	(CTCC)n	Simple_repeat	1	55	(0)	520207
15	18.4	2.0	3.9	chr10	98607110	98607119	(35190303)	+	(TTTTTC)n	Simple_repeat	4	12	(0)	520208
684	32.2	9.9	1.9	chr10	98607157	98607640	(35189782)	C	Mam_R4	LINE/Dong-R4	(819)	2990	2464	520209
1238	22.3	6.6	15.1	chr10	100629570	100629877	(33167545)	+	MLT1A1	LTR/ERVL-MaLR	87	375	(33)	523688
2056	9.5	5.2	0.0	chr10	100629878	100630150	(33167272)	+	AluSx1	SINE/Alu	3	290	(22)	523690
14	24.3	2.0	2.0	chr10	100654144	100654193	(33143229)	+	(GCCCG)n	Simple_repeat	1	51	(0)	523733
13	27.2	5.6	1.3	chr10	100654194	100654215	(33143207)	+	(GCCTCG)n	Simple_repeat	1	76	(0)	523734
38	26.0	4.0	0.8	chr10	100654348	100654472	(33142950)	+	(TC)n	Simple_repeat	1	130	(0)	523735
30	11.7	2.1	0.0	chr10	100895846	100895893	(32901529)	+	(CT)n	Simple_repeat	1	49	(0)	524137
62	20.7	5.4	0.6	chr10	101229292	101229457	(32567965)	+	(TC)n	Simple_repeat	1	175	(0)	524695
25	13.1	1.9	1.9	chr10	102114636	102114687	(31682735)	+	G-rich	Low_complexity	1	53	(0)	526318
19	20.2	1.6	4.8	chr10	102114740	102114806	(31682616)	+	(TCC)n	Simple_repeat	1	64	(0)	526319
19	19.2	0.0	0.0	chr10	102114877	102114918	(31682504)	+	(CACTCA)n	Simple_repeat	1	42	(0)	526320
21	23.5	1.5	2.9	chr10	102114921	102114997	(31682425)	+	(CTCC)n	Simple_repeat	1	75	(0)	526321
17	11.3	0.0	0.0	chr10	102115079	102115107	(31682315)	+	(AGGG)n	Simple_repeat	1	29	(0)	526322
571	33.1	8.4	6.1	chr10	103516258	103516634	(30280788)	C	L2	LINE/L2	(796)	2623	2245	529121
203	24.1	10.8	0.0	chr10	103516704	103516761	(30280661)	C	MER5A	DNA/hAT-Charlie	(0)	189	125	529123
313	22.1	7.2	0.0	chr10	103516765	103516841	(30280581)	+	L1M4	LINE/L1	4662	4744	(1402)	529124
54	25.8	2.2	2.6	chr10	103516842	103516950	(30280472)	+	(TTCC)n	Simple_repeat	1	151	(38)	529125
15	14.9	6.0	3.8	chr10	103516951	103517000	(30280422)	+	(TTTCC)n	Simple_repeat	1	53	(0)	529126
54	25.8	2.2	2.6	chr10	103517001	103517026	(30280396)	+	(TTCC)n	Simple_repeat	152	189	(0)	529125
1912	15.5	0.0	0.0	chr10	103517027	103517316	(30280106)	C	AluJb	SINE/Alu	(12)	300	11	529127
18	27.6	0.0	0.0	chr10	107230655	107230706	(26566716)	+	A-rich	Low_complexity	1	52	(0)	534958
1117	28.8	4.5	6.6	chr10	107230980	107231451	(26565971)	+	LTR16A2	LTR/ERVL	34	495	(0)	534959
1920	16.1	1.8	4.3	chr10	108729233	108729582	(25067840)	+	LTR3B_	LTR/ERVK	158	498	(1)	537017
284	16.2	0.7	5.8	chr10	108729711	108730391	(25067031)	+	GA-rich	Low_complexity	1	686	(0)	537018
376	24.6	13.0	6.7	chr10	108730536	108730714	(25066708)	+	HERVK14-int	LTR/ERVK	41	232	(6970)	537019
34	11.4	0.0	0.0	chr10	110005975	110006032	(23791390)	+	(GCT)n	Simple_repeat	1	58	(0)	538774
2472	7.4	0.0	0.7	chr10	110330016	110330312	(23467110)	+	AluSq2	SINE/Alu	1	295	(18)	539275
1332	26.7	9.9	5.5	chr10	110330313	110330645	(23466777)	C	L2a	LINE/L2	(620)	2799	2452	539274
2669	6.2	1.2	0.3	chr10	110330646	110330986	(23466436)	+	LTR14A	LTR/ERVK	1	344	(0)	539276
7987	1.2	0.0	1.2	chr10	110856206	110857182	(22940240)	+	L1PA2	LINE/L1	5189	6153	(2)	540277
16	16.5	0.0	0.0	chr10	110857186	110857212	(22940210)	+	A-rich	Low_complexity	1	27	(0)	540278
245	33.3	1.2	0.0	chr10	110857347	110857427	(22939995)	C	MIR1_Amn	SINE/MIR	(73)	157	76	540279
2458	16.3	8.9	2.1	chr10	112840011	112840530	(20956892)	+	MER89	LTR/ERV1	1	559	(0)	543291
342	26.2	13.4	7.0	chr10	112840531	112840587	(20956835)	+	MIRb	SINE/MIR	197	251	(17)	543290
35	20.3	3.8	5.2	chr10	112951615	112951748	(20845674)	+	(CCGCC)n	Simple_repeat	1	132	(0)	543551
16	25.6	3.4	1.6	chr10	112951983	112952041	(20845381)	+	(CTCT)n	Simple_repeat	1	61	(0)	543552
453	28.3	11.1	3.2	chr10	113976428	113976617	(19820805)	+	MLT1M	LTR/ERVL-MaLR	7	213	(459)	545180
40	8.2	0.0	0.0	chr10	113976645	113976696	(19820726)	+	(TC)n	Simple_repeat	1	52	(0)	545181
26	11.8	4.3	0.0	chr10	113976714	113976759	(19820663)	+	(CT)n	Simple_repeat	1	48	(0)	545182
92	31.2	2.2	0.9	chr10	116289636	116289951	(17507471)	+	(TCTC)n	Simple_repeat	1	323	(0)	548562
36	2.9	0.0	0.0	chr10	116289954	116289988	(17507434)	+	(TC)n	Simple_repeat	1	35	(0)	548563
715	18.3	3.1	4.1	chr10	116290037	116290230	(17507192)	C	L1MB3	LINE/L1	(7)	6176	5985	548564
1452	22.4	2.0	0.0	chr10	119199133	119199426	(14597996)	+	MLT1A0	LTR/ERVL-MaLR	66	365	(0)	553445
436	21.6	6.7	0.0	chr10	119286932	119287042	(14510380)	+	L2a	LINE/L2	3304	3422	(4)	553621
179	22.4	1.6	1.4	chr10	119287044	119287469	(14509953)	+	GA-rich	Low_complexity	1	433	(0)	553622
6645	16.7	6.3	2.2	chr10	120192397	120194255	(13603167)	C	L1MA4A	LINE/L1	(8)	7357	5382	555274
54	1.9	0.0	0.0	chr10	120582752	120582804	(13214618)	+	(TCCC)n	Simple_repeat	1	53	(0)	555881
17	11.2	0.0	0.0	chr10	120582805	120582834	(13214588)	+	(TCCT)n	Simple_repeat	1	30	(0)	555882
894	31.8	6.6	5.2	chr10	121075390	121075524	(12721898)	C	L2a	LINE/L2	(419)	3007	2868	556596
201	32.7	14.3	2.6	chr10	121996647	121997145	(11800277)	C	L2	LINE/L2	(841)	2578	2012	558106
239	19.7	16.4	1.6	chr10	121997163	121997224	(11800198)	C	MLT1M	LTR/ERVL-MaLR	(2)	670	598	558107
402	28.0	22.0	2.8	chr10	123969513	123970239	(9827183)	C	L2a	LINE/L2	(10)	3416	2490	561177
291	37.5	7.2	2.5	chr10	124105844	124106040	(9691382)	C	MIRc	SINE/MIR	(45)	223	17	561365
104	18.2	1.3	2.2	chr10	124239401	124239624	(9557798)	+	GA-rich	Low_complexity	1	227	(0)	561560
23	22.4	0.0	0.0	chr10	124239634	124239709	(9557713)	+	(GT)n	Simple_repeat	1	76	(0)	561561
693	8.8	21.1	4.0	chr10	125905170	125905294	(7892128)	+	FAM	SINE/Alu	20	171	(14)	564182
528	22.7	7.4	0.6	chr10	125905314	125905490	(7891932)	C	L1MEg	LINE/L1	(2550)	3596	3407	564180
473	23.8	5.5	3.9	chr10	125926609	125926840	(7870582)	C	L1MEg	LINE/L1	(4419)	1823	1588	564216
348	25.5	16.3	3.9	chr10	125926881	125927035	(7870387)	C	L1ME3	LINE/L1	(12)	6161	5984	564226
41	6.3	0.0	0.0	chr10	126099354	126099404	(7698018)	+	(CTCC)n	Simple_repeat	1	51	(0)	564432
2609	24.4	3.9	0.7	chr10	127235220	127236318	(6561104)	C	L1ME1	LINE/L1	(61)	6103	4945	565930
47	17.3	0.0	2.1	chr10	127236319	127236415	(6561007)	+	(CCCT)n	Simple_repeat	1	97	(0)	565931
458	23.2	15.9	2.6	chr10	127236416	127236500	(6560922)	C	L1MC	LINE/L1	(1194)	4952	4860	565932
26	0.0	0.0	0.0	chr10	127236501	127236525	(6560897)	+	(T)n	Simple_repeat	1	25	(0)	565933
458	21.8	8.9	1.6	chr10	127236526	127236768	(6560654)	C	L1MC	LINE/L1	(1287)	4859	4398	565932
40	10.3	2.7	0.0	chr10	127544759	127544831	(6252591)	+	(TC)n	Simple_repeat	1	75	(0)	566314
73	26.4	2.4	0.9	chr10	127544870	127545081	(6252341)	+	(CT)n	Simple_repeat	1	217	(0)	566315
326	27.6	2.0	1.0	chr10	127545082	127545180	(6252242)	C	MLT1K	LTR/ERVL-MaLR	(167)	428	329	566313
3585	27.1	9.8	6.3	chr10	127545211	127547204	(6250218)	C	HAL1	LINE/L1	(1)	2506	442	566316
91	4.2	0.0	0.0	chr10	130971627	130971724	(2825698)	+	(TCCT)n	Simple_repeat	1	98	(0)	570105
47	16.6	0.0	0.0	chr10	130971726	130971810	(2825612)	+	(TCTC)n	Simple_repeat	1	85	(0)	570106
2096	10.8	0.4	0.0	chr10	130971811	130972088	(2825334)	C	AluSp	SINE/Alu	(34)	279	1	570107
646	23.1	4.0	1.2	chr10	132172754	132172924	(1624498)	C	L1MC4a	LINE/L1	(1069)	6813	6638	571394
136	22.1	0.7	0.3	chr10	132172936	132173222	(1624200)	+	(TCTC)n	Simple_repeat	1	289	(0)	571396
949	30.7	7.8	1.5	chr10	132173226	132173679	(1623743)	C	L1MC4a	LINE/L1	(1258)	6624	6152	571394
714	22.4	11.9	1.4	chr10	132886660	132886944	(910478)	+	LTR35	LTR/ERV1	52	425	(183)	572017
498	5.8	14.4	0.2	chr10	132886976	132888069	(909353)	+	(TC)n	Simple_repeat	1	1252	(0)	572018
538	19.5	3.0	0.0	chr10	132888070	132888197	(909225)	+	LTR35	LTR/ERV1	416	547	(0)	572017
13	20.4	2.4	2.4	chr10	132912095	132912135	(885287)	+	(CTCC)n	Simple_repeat	1	42	(0)	572040
216	4.4	11.5	0.7	chr10	132912141	132912635	(884787)	+	(TC)n	Simple_repeat	1	552	(0)	572041
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
395	22.9	10.5	1.5	chr11	359500	359638	(134726984)	C	MLT1A	LTR/ERVL-MaLR	(4)	386	240	573325
351	18.0	0.8	1.9	chr11	359665	360384	(134726238)	+	GA-rich	Low_complexity	1	726	(0)	573326
563	19.3	3.6	0.7	chr11	360409	360544	(134726078)	C	MLT1A	LTR/ERVL-MaLR	(204)	170	31	573325
2543	6.6	1.9	0.0	chr11	912563	912867	(134173755)	+	AluY	SINE/Alu	1	311	(0)	574082
218	20.4	2.0	0.0	chr11	1122736	1122784	(133963838)	+	L2b	LINE/L2	3326	3375	(0)	574335
95	26.6	4.9	3.4	chr11	1122929	1123360	(133963262)	+	(CCTCCCT)n	Simple_repeat	1	438	(0)	574336
616	30.4	8.9	1.1	chr11	1298838	1299199	(133787423)	+	L1MD3	LINE/L1	7603	7995	(0)	574443
17	29.1	4.9	2.8	chr11	1736337	1736438	(133350184)	+	(TGGA)n	Simple_repeat	1	107	(0)	575019
12	19.3	7.1	0.0	chr11	1736461	1736502	(133350120)	+	GA-rich	Low_complexity	1	45	(0)	575020
127	20.4	6.9	0.7	chr11	1736511	1736889	(133349733)	+	(GAATG)n	Satellite	1	405	(0)	575021
253	28.0	4.5	4.5	chr11	1737057	1737280	(133349342)	C	L1M5	LINE/L1	(1577)	4569	4346	575022
1878	13.5	6.3	0.0	chr11	3069119	3069399	(132017223)	+	AluSz6	SINE/Alu	2	301	(11)	576528
60	3.2	0.0	0.0	chr11	3069400	3069462	(132017160)	+	(AGAGAGGG)n	Simple_repeat	1	63	(0)	576529
15	12.6	0.0	0.0	chr11	3069463	3069489	(132017133)	+	(AAGG)n	Simple_repeat	1	27	(0)	576530
1707	12.7	4.4	6.1	chr11	3069490	3069834	(132016788)	C	THE1C	LTR/ERVL-MaLR	(36)	339	1	576531
227	20.6	6.7	4.9	chr11	3466501	3466602	(131620020)	+	SVA_D	Retroposon/SVA	2	105	(1281)	577079
16	8.7	0.0	0.0	chr11	6481521	6481545	(128605077)	+	(AGC)n	Simple_repeat	1	25	(0)	581392
1986	13.0	0.0	0.0	chr11	6514135	6514403	(128572219)	C	AluSz	SINE/Alu	(43)	269	1	581450
2874	20.5	4.1	3.7	chr11	6514404	6514446	(128572176)	C	L1ME3	LINE/L1	(641)	5521	5477	581448
36	19.6	0.9	6.2	chr11	6514448	6514470	(128572152)	+	(CCTT)n	Simple_repeat	1	18	(0)	581451
28	0.0	0.0	0.0	chr11	6514471	6514497	(128572125)	+	(TCCTT)n	Simple_repeat	1	27	(0)	581452
36	19.6	0.9	6.2	chr11	6514498	6514585	(128572037)	+	(CCTT)n	Simple_repeat	3	89	(0)	581453
1294	21.5	4.8	7.2	chr11	6514586	6514782	(128571840)	C	L1MC4	LINE/L1	(0)	8042	7800	581454
681	23.4	6.1	4.0	chr11	7895324	7895546	(127191076)	C	MER110A	LTR/ERV1	(224)	244	17	583220
1049	21.2	13.3	10.7	chr11	7895599	7896094	(127190528)	C	MER67D	LTR/ERV1	(3)	511	1	583221
58	6.0	0.0	0.0	chr11	9647049	9647118	(125439504)	+	(CCTC)n	Simple_repeat	1	70	(0)	586259
1893	17.1	0.0	0.7	chr11	9647139	9647431	(125439191)	C	AluJr4	SINE/Alu	(13)	299	9	586260
1576	19.8	4.0	0.3	chr11	9675016	9675308	(125411314)	+	AluJo	SINE/Alu	1	304	(8)	586325
111	3.7	0.0	0.0	chr11	9675310	9675421	(125411201)	+	(AG)n	Simple_repeat	1	112	(0)	586326
19	10.8	2.3	4.4	chr11	9675422	9675465	(125411157)	+	GA-rich	Low_complexity	1	45	(0)	586327
18	7.0	6.7	0.0	chr11	9675559	9675588	(125411034)	+	(TA)n	Simple_repeat	1	32	(0)	586328
311	29.2	10.4	8.3	chr11	9691649	9691817	(125394805)	+	MIR3	SINE/MIR	20	195	(73)	586362
182	33.0	3.5	6.8	chr11	9691901	9692017	(125394605)	+	L2a	LINE/L2	3039	3151	(236)	586363
588	29.4	5.1	1.3	chr11	10186975	10187213	(124899409)	+	MLT1J2	LTR/ERVL-MaLR	1	248	(196)	587155
40	3.9	5.6	0.0	chr11	10187271	10187324	(124899298)	+	(CT)n	Simple_repeat	1	57	(0)	587156
707	23.5	13.0	3.8	chr11	10187414	10187678	(124898944)	+	LTR36	LTR/ERV1	319	611	(0)	587157
850	12.9	0.0	0.0	chr11	10215525	10215640	(124870982)	+	AluJb	SINE/Alu	185	300	(12)	587199
322	26.0	17.2	0.7	chr11	10215695	10215849	(124870773)	+	L2c	LINE/L2	2692	2877	(542)	587190
219	36.1	7.3	11.0	chr11	10215900	10216154	(124870468)	+	L2c	LINE/L2	2975	3219	(168)	587190
261	26.5	7.0	2.6	chr11	10669223	10669423	(124417199)	+	MIR3	SINE/MIR	19	228	(34)	587896
259	12.1	2.8	3.5	chr11	11246866	11247010	(123839612)	C	HERV17-int	LTR/ERV1	(7779)	847	704	588885
84	25.4	0.5	0.9	chr11	11247018	11247230	(123839392)	+	(TC)n	Simple_repeat	1	214	(0)	588886
17	15.6	0.0	0.0	chr11	11247230	11247258	(123839364)	+	(CA)n	Simple_repeat	1	29	(0)	588887
1190	34.2	8.2	2.5	chr11	11838588	11839372	(123247250)	C	L2a	LINE/L2	(252)	3174	2341	589836
3005	24.5	10.2	2.8	chr11	11849261	11849322	(123237300)	C	HAL1	LINE/L1	(456)	2051	1990	589850
874	18.8	9.6	5.7	chr11	11849323	11849531	(123237091)	+	MER20	DNA/hAT-Charlie	2	219	(0)	589854
3005	24.5	10.2	2.8	chr11	11849532	11850705	(123235917)	C	HAL1	LINE/L1	(518)	1989	713	589850
4914	14.7	0.3	0.5	chr11	13196415	13197178	(121889444)	+	L1PA16	LINE/L1	12	773	(6080)	591967
2369	6.2	1.2	0.0	chr11	13197184	13197520	(121889102)	+	L1PA16	LINE/L1	1757	2097	(4756)	591967
11	14.8	4.9	4.7	chr11	13277392	13277432	(121809190)	+	G-rich	Low_complexity	1	43	(0)	592124
14	0.0	8.3	0.0	chr11	14688074	14688097	(120398525)	+	(TTTC)n	Simple_repeat	1	26	(0)	594360
65	9.4	1.9	0.9	chr11	14688098	14688204	(120398418)	+	(TC)n	Simple_repeat	1	109	(0)	594361
24	22.3	3.0	5.8	chr11	14706090	14706190	(120380432)	+	(CCTT)n	Simple_repeat	1	104	(0)	594382
13	30.3	4.0	1.3	chr11	16607821	16607894	(118478728)	+	(CAGG)n	Simple_repeat	1	77	(0)	597238
3909	14.8	4.0	0.9	chr11	16720947	16721616	(118365006)	+	MER41-int	LTR/ERV1	1	638	(5308)	597362
1025	16.4	9.6	1.9	chr11	16721625	16721835	(118364787)	+	MSTA	LTR/ERVL-MaLR	200	428	(0)	597363
3383	18.9	6.0	7.6	chr11	17363224	17363500	(117723122)	C	L1MCb	LINE/L1	(617)	2390	2071	598640
50	0.0	0.0	0.0	chr11	17363501	17363545	(117723077)	+	(TCCC)n	Simple_repeat	1	45	(0)	598642
3383	18.8	6.0	7.7	chr11	17363546	17363578	(117723044)	C	L1MCb	LINE/L1	(5058)	2070	2064	598640
1924	17.6	0.0	1.9	chr11	17363579	17363896	(117722726)	C	AluJb	SINE/Alu	(0)	312	1	598643
41	19.9	3.5	1.7	chr11	17735650	17735762	(117350860)	+	(CCCT)n	Simple_repeat	1	117	(0)	599230
996	19.3	4.9	0.9	chr11	17830363	17830601	(117256021)	C	MSTD	LTR/ERVL-MaLR	(0)	465	194	599388
64	8.8	0.0	0.0	chr11	17830602	17830688	(117255934)	+	(GA)n	Simple_repeat	1	87	(0)	599389
616	17.8	9.2	0.0	chr11	17830730	17830858	(117255764)	C	MSTD	LTR/ERVL-MaLR	(286)	142	1	599388
12	20.8	0.0	2.9	chr11	19478520	19478554	(115608068)	+	(ATTA)n	Simple_repeat	1	35	(0)	602266
624	22.0	5.0	3.5	chr11	20547446	20547643	(114538979)	C	MER20B	DNA/hAT-Charlie	(14)	769	569	604115
108	0.0	3.2	3.1	chr11	20547651	20547776	(114538846)	+	(CTCTCC)n	Simple_repeat	1	130	(0)	604116
5341	6.9	2.2	5.6	chr11	20547777	20548610	(114538012)	+	SVA_E	Retroposon/SVA	58	862	(520)	604117
697	26.4	10.8	7.5	chr11	20888660	20889125	(114197497)	C	MLT1H	LTR/ERVL-MaLR	(37)	512	30	604636
1569	27.2	7.0	5.0	chr11	22311191	22311996	(112774626)	+	L1M5	LINE/L1	4372	5195	(951)	606739
55	12.1	4.0	0.9	chr11	22312003	22312103	(112774519)	+	GA-rich	Low_complexity	1	105	(0)	606742
311	24.9	1.0	1.0	chr11	22312104	22312201	(112774421)	C	MLT2B2	LTR/ERVL	(20)	534	434	606743
307	29.8	7.7	1.4	chr11	22312210	22312383	(112774239)	C	MIRb	SINE/MIR	(70)	198	3	606744
20302	4.2	0.6	0.4	chr11	22313714	22316128	(112770494)	C	HERV17-int	LTR/ERV1	(3559)	5067	2647	606746
199	24.6	4.4	1.1	chr11	22316129	22316746	(112769876)	+	(TC)n	Simple_repeat	1	645	(0)	606747
6092	7.4	2.7	0.7	chr11	22316753	22317577	(112769045)	C	HERV17-int	LTR/ERV1	(7784)	842	1	606746
88	32.2	5.7	1.7	chr11	26600201	26600688	(108485934)	+	(TTCTC)n	Simple_repeat	1	516	(0)	612708
10825	13.2	0.5	0.6	chr11	26823240	26824871	(108261751)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	613016
1307	27.2	9.6	0.0	chr11	26962529	26963036	(108123586)	+	Kanga1	DNA/TcMar-Tc2	163	724	(1021)	613218
55	30.0	1.5	3.0	chr11	26963037	26963235	(108123387)	+	GA-rich	Low_complexity	1	202	(0)	613219
404	21.8	0.0	0.0	chr11	26963236	26963322	(108123300)	+	Kanga1d	DNA/TcMar-Tc2	153	239	(370)	613220
491	25.0	7.8	2.2	chr11	26963349	26963626	(108122996)	+	Kanga1a	DNA/TcMar-Tc2	457	751	(3)	613221
31	0.0	0.0	0.0	chr11	27234621	27234649	(107851973)	+	(AGC)n	Simple_repeat	1	29	(0)	613635
394	32.1	9.7	7.3	chr11	27234821	27234971	(107851651)	C	MIRb	SINE/MIR	(2)	266	112	613636
97	24.0	0.5	0.5	chr11	29365131	29365347	(105721275)	+	GA-rich	Low_complexity	1	218	(0)	616925
262	34.9	9.7	2.6	chr11	29365349	29365616	(105721006)	+	L2b	LINE/L2	3137	3425	(1)	616926
1185	15.0	2.4	4.5	chr11	29724372	29724620	(105362002)	C	THE1D	LTR/ERVL-MaLR	(0)	465	188	617438
138	14.3	0.0	0.0	chr11	29724626	29724851	(105361771)	+	(GAGAGA)n	Simple_repeat	1	226	(0)	617439
1011	16.9	6.7	2.5	chr11	29724852	29725077	(105361545)	C	THE1C	LTR/ERVL-MaLR	(182)	250	1	617440
695	26.5	5.8	12.9	chr11	32410231	32410476	(102676146)	+	L2	LINE/L2	1746	1971	(1448)	621557
362	21.2	5.7	10.8	chr11	32410549	32410696	(102675926)	+	L1ME4a	LINE/L1	5984	6123	(1)	621555
686	24.9	11.1	3.1	chr11	33429713	33430002	(101656620)	+	L2a	LINE/L2	2525	2840	(579)	623493
53	17.8	0.0	0.0	chr11	33430006	33430104	(101656518)	+	(CCTT)n	Simple_repeat	1	99	(0)	623497
258	21.7	1.6	0.0	chr11	33430121	33430180	(101656442)	+	MER103C	DNA/hAT-Charlie	154	214	(83)	623498
55	12.1	0.0	2.1	chr11	33430183	33430277	(101656345)	+	(CCTC)n	Simple_repeat	1	95	(0)	623499
339	32.1	6.8	4.1	chr11	34405174	34405345	(100681277)	+	MIRb	SINE/MIR	2	178	(90)	625217
18	3.7	0.0	6.2	chr11	35662600	35662631	(99423991)	+	(TCC)n	Simple_repeat	1	32	(0)	627134
12	35.1	1.4	1.4	chr11	35663487	35663556	(99423066)	+	GA-rich	Low_complexity	1	71	(0)	627135
85	2.2	2.2	0.0	chr11	39176079	39176169	(95910453)	+	(TTTC)n	Simple_repeat	1	93	(0)	632139
29	5.0	4.8	0.0	chr11	39176170	39176211	(95910411)	+	(CT)n	Simple_repeat	1	44	(0)	632140
35	2.2	4.3	0.0	chr11	39176212	39176257	(95910365)	+	(GA)n	Simple_repeat	1	48	(0)	632141
1141	4.7	0.0	0.0	chr11	39176258	39176385	(95910237)	C	AluY	SINE/Alu	(183)	128	1	632142
486	15.5	6.7	0.0	chr11	43738811	43738894	(91347728)	C	LTR51	LTR/ERV1	(0)	671	582	638926
1585	20.5	4.9	0.9	chr11	43738893	43739227	(91347395)	C	MER65C	LTR/ERV1	(112)	349	1	638927
230	33.8	9.9	3.4	chr11	43739290	43739368	(91347254)	C	L2b	LINE/L2	(217)	3158	3078	638925
1834	15.8	9.8	1.3	chr11	43739369	43739741	(91346881)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	638928
28	14.0	8.7	3.0	chr11	44310180	44310213	(90776409)	+	(CCTCTC)n	Simple_repeat	1	34	(0)	639877
35	16.1	3.5	0.0	chr11	44310214	44310330	(90776292)	+	(CT)n	Simple_repeat	1	121	(0)	639878
28	14.0	8.7	3.0	chr11	44310277	44310333	(90776289)	+	(CCTCTC)n	Simple_repeat	5	67	(0)	639879
16	17.1	8.3	3.9	chr11	44310468	44310539	(90776083)	+	(TCTCCC)n	Simple_repeat	1	78	(0)	639880
15	18.0	4.3	2.1	chr11	46120708	46120753	(88965869)	+	(TCCC)n	Simple_repeat	1	48	(0)	643309
28	24.9	5.9	0.9	chr11	46120810	46120911	(88965711)	+	GA-rich	Low_complexity	1	108	(0)	643310
19	10.4	0.0	0.0	chr11	46120986	46121016	(88965606)	+	(GAG)n	Simple_repeat	1	31	(0)	643311
21	8.9	2.8	0.0	chr11	46121048	46121083	(88965539)	+	(GCT)n	Simple_repeat	1	37	(0)	643312
13	5.0	0.0	4.3	chr11	46121133	46121155	(88965467)	+	(CCT)n	Simple_repeat	1	23	(0)	643313
37	4.3	4.2	0.0	chr11	46121156	46121203	(88965419)	+	(CT)n	Simple_repeat	1	50	(0)	643314
16	21.7	0.0	0.0	chr11	46121236	46121267	(88965355)	+	G-rich	Low_complexity	1	32	(0)	643315
13	8.9	0.0	3.9	chr11	46121400	46121425	(88965197)	+	(CAG)n	Simple_repeat	1	26	(0)	643316
21	25.1	4.2	3.0	chr11	46121485	46121519	(88965103)	+	(CGCCCG)n	Simple_repeat	1	94	(0)	643317
26	7.9	7.3	1.7	chr11	46121520	46121574	(88965048)	+	(CCG)n	Simple_repeat	1	59	(0)	643318
169	16.6	0.5	4.3	chr11	59690605	59690972	(75395650)	+	(TTCC)n	Simple_repeat	1	370	(0)	657234
1709	19.5	0.3	6.8	chr11	59690975	59691281	(75395341)	C	AluJb	SINE/Alu	(25)	287	1	657235
93	28.2	1.8	3.5	chr11	61276856	61277191	(73809431)	+	GA-rich	Low_complexity	1	342	(0)	659849
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
2337	9.2	0.0	0.3	chr11	62841037	62841341	(72245281)	+	AluSc	SINE/Alu	1	304	(5)	662921
1365	9.9	0.0	6.1	chr11	62841342	62841418	(72245204)	+	AluSc8	SINE/Alu	131	199	(112)	662920
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
189	21.3	2.1	4.1	chr11	63035860	63035908	(72050714)	+	MIR	SINE/MIR	2	49	(213)	663354
566	22.2	12.4	8.0	chr11	63036136	63036311	(72050311)	C	MLT1J	LTR/ERVL-MaLR	(327)	185	1	663355
13	31.8	0.0	4.2	chr11	64643117	64643187	(70443435)	+	G-rich	Low_complexity	1	71	(0)	665982
12	12.0	3.3	3.2	chr11	64643295	64643324	(70443298)	+	(GCC)n	Simple_repeat	1	31	(0)	665983
13	22.8	3.2	4.7	chr11	64643671	64643732	(70442890)	+	(CGCTCGG)n	Simple_repeat	1	64	(0)	665984
247	10.8	6.5	0.6	chr11	65516229	65516702	(69569920)	+	GA-rich	Low_complexity	1	505	(0)	667692
289	22.1	6.9	0.0	chr11	65516892	65516986	(69569636)	C	L1MEd	LINE/L1	(5495)	1591	1490	667693
30	6.0	0.0	0.0	chr11	66417986	66418020	(68668602)	+	(AC)n	Simple_repeat	1	35	(0)	669477
239	24.4	26.5	0.0	chr11	68039389	68039474	(67047148)	C	MIR	SINE/MIR	(118)	144	28	672664
30	12.0	4.5	2.9	chr11	68121277	68121343	(66965279)	+	(CGG)n	Simple_repeat	1	70	(0)	672798
13	19.2	2.2	4.3	chr11	68121610	68121654	(66964968)	+	G-rich	Low_complexity	1	46	(0)	672799
1798	19.4	0.3	0.0	chr11	68132183	68132491	(66954131)	+	AluJb	SINE/Alu	1	310	(2)	672827
62	10.7	0.0	6.2	chr11	68132492	68132615	(66954007)	+	GA-rich	Low_complexity	5	120	(0)	672828
2306	8.8	0.3	0.0	chr11	68132626	68132930	(66953692)	+	AluSp	SINE/Alu	2	307	(6)	672829
7952	14.2	2.5	10.0	chr11	68235263	68235456	(66851166)	C	L1M4c	LINE/L1	(5827)	557	386	673012
2390	9.5	0.0	0.0	chr11	68235457	68235752	(66850870)	+	AluSz	SINE/Alu	1	296	(16)	673027
146	21.5	3.9	0.3	chr11	70092984	70093345	(64993277)	+	(TC)n	Simple_repeat	1	376	(0)	676258
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
280	13.9	2.8	6.1	chr11	71149731	71150436	(63936186)	+	GA-rich	Low_complexity	1	726	(0)	677785
709	33.3	7.7	5.2	chr11	71940613	71941017	(63145605)	C	L2c	LINE/L2	(0)	3387	2972	679023
516	35.4	1.4	2.3	chr11	71941069	71941282	(63145340)	C	L2c	LINE/L2	(557)	2862	2651	679023
1186	31.1	7.2	1.9	chr11	71941412	71941930	(63144692)	C	L2a	LINE/L2	(5)	3421	2864	679024
673	17.6	3.1	4.1	chr11	72736008	72736203	(62350419)	C	MER96B	DNA/hAT	(158)	259	66	680490
14	29.5	0.0	4.5	chr11	73598110	73598176	(61488446)	+	G-rich	Low_complexity	1	67	(0)	682198
15	0.0	0.0	0.0	chr11	73598495	73598511	(61488111)	+	(CA)n	Simple_repeat	1	17	(0)	682199
39	0.0	0.0	0.0	chr11	73598518	73598553	(61488069)	+	(TCTCTCCC)n	Simple_repeat	1	36	(0)	682200
1140	13.9	0.0	2.3	chr11	73780804	73780976	(61305646)	+	AluSx1	SINE/Alu	105	273	(39)	682653
52	2.7	7.8	0.0	chr11	73780981	73781057	(61305565)	+	(AG)n	Simple_repeat	1	83	(0)	682654
789	21.8	0.0	2.7	chr11	75099503	75099613	(59987009)	+	AluJb	SINE/Alu	169	276	(36)	685327
19	6.9	0.0	3.0	chr11	75099886	75099918	(59986704)	+	(AGAA)n	Simple_repeat	1	33	(0)	685329
619	29.9	6.0	3.7	chr11	75099928	75100385	(59986237)	C	L1ME3G	LINE/L1	(75)	817	341	685330
62	16.6	0.9	0.0	chr11	76140049	76140161	(58946461)	+	(CTCT)n	Simple_repeat	1	114	(0)	687400
19905	12.9	3.9	4.7	chr11	77486362	77489410	(57597212)	+	L1M1	LINE/L1	12	3041	(4524)	690007
9894	2.7	0.0	20.1	chr11	77489411	77491145	(57595477)	+	SVA_D	Retroposon/SVA	1	1386	(0)	690008
16	24.7	3.8	0.0	chr11	77819417	77819469	(57267153)	+	(GCA)n	Simple_repeat	1	55	(0)	690657
1483	19.9	0.3	6.1	chr11	77972818	77973144	(57113478)	C	AluJo	SINE/Alu	(4)	308	1	691001
6583	16.3	4.1	7.5	chr11	77973145	77974230	(57112392)	C	L1MB8	LINE/L1	(1734)	4412	3363	690992
226	31.8	6.0	2.3	chr11	78343086	78343262	(56743360)	+	L1M5	LINE/L1	5545	5728	(396)	691841
42	8.9	5.4	4.1	chr11	78343370	78343462	(56743160)	+	G-rich	Low_complexity	1	98	(0)	691842
1303	17.4	6.2	0.7	chr11	78343659	78343964	(56742658)	C	MER33	DNA/hAT-Charlie	(0)	324	1	691843
35	37.9	3.1	1.5	chr11	82566890	82567073	(52519549)	+	GA-rich	Low_complexity	1	188	(0)	699066
1576	18.5	4.4	0.0	chr11	82567074	82567333	(52519289)	+	AluSz6	SINE/Alu	2	273	(39)	699067
8110	20.4	7.4	6.9	chr11	82680539	82682499	(52404123)	C	HUERS-P3b-int	LTR/ERV1	(4776)	2642	664	699274
32	3.2	0.0	0.0	chr11	82682500	82682531	(52404091)	+	(GA)n	Simple_repeat	1	32	(0)	699275
8110	20.4	7.1	7.0	chr11	82682532	82682809	(52403813)	C	HUERS-P3b-int	LTR/ERV1	(6755)	663	409	699274
645	11.5	0.0	5.0	chr11	82682796	82682896	(52403726)	C	HUERS-P3b-int	LTR/ERV1	(7322)	96	1	699274
1808	14.6	2.9	5.4	chr11	82889074	82889389	(52197233)	+	AluJr	SINE/Alu	1	308	(4)	699649
47	31.3	0.5	3.5	chr11	82889390	82889587	(52197035)	+	GA-rich	Low_complexity	1	199	(0)	699650
255	29.4	2.7	4.0	chr11	82889592	82889740	(52196882)	C	L2c	LINE/L2	(240)	3147	3001	699651
22	18.1	0.0	2.1	chr11	82980820	82980867	(52105755)	+	GA-rich	Low_complexity	1	48	(0)	699781
201	34.5	11.0	5.8	chr11	84291956	84292247	(50794375)	C	L2c	LINE/L2	(34)	3353	3045	702079
300	25.5	13.6	5.6	chr11	84292296	84292490	(50794132)	+	LTR79	LTR/ERVL	73	285	(242)	702080
243	18.8	10.5	2.3	chr11	84292506	84292592	(50794030)	+	LTR79	LTR/ERVL	321	415	(112)	702080
1572	30.5	5.5	7.2	chr11	85889875	85890733	(49195889)	+	LTR78	LTR/ERV1	64	906	(398)	704565
767	31.4	5.0	0.0	chr11	86100118	86100343	(48986279)	+	MIRc	SINE/MIR	5	242	(26)	704926
1694	11.9	0.0	17.1	chr11	86100497	86100817	(48985805)	C	AluSz6	SINE/Alu	(11)	301	42	704927
152	7.2	5.1	0.0	chr11	89177007	89177241	(45909381)	+	(GA)n	Simple_repeat	1	247	(0)	709647
2128	9.6	4.9	0.3	chr11	90249959	90250249	(44836373)	C	AluSz	SINE/Alu	(7)	305	1	711212
371	14.8	0.0	1.9	chr11	93775243	93775296	(41311326)	+	FLAM_A	SINE/Alu	15	67	(75)	716148
246	28.8	0.0	1.5	chr11	93775356	93775422	(41311200)	+	L1MEf	LINE/L1	270	335	(5865)	716146
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
292	35.7	9.5	6.9	chr11	95891478	95891705	(39194917)	+	MamRTE1	LINE/RTE-BovB	3584	3812	(0)	719292
40	15.7	1.2	3.5	chr11	95891827	95891910	(39194712)	+	GA-rich	Low_complexity	1	85	(0)	719294
95	3.3	0.0	0.0	chr11	96914326	96914419	(38172203)	+	(TC)n	Simple_repeat	1	94	(0)	720653
6381	18.7	2.1	5.2	chr11	98207080	98208383	(36878239)	C	LTR2752	LTR/ERV1	(0)	1263	1	722197
81	21.6	0.0	1.1	chr11	98955924	98956099	(36130523)	+	(CCTT)n	Simple_repeat	1	176	(0)	723157
1151	22.1	9.6	14.2	chr11	99368769	99369168	(35717454)	C	MER67D	LTR/ERV1	(4)	510	150	723712
76	1.4	0.0	0.0	chr11	99598254	99598325	(35488297)	+	(CTTTT)n	Simple_repeat	1	72	(0)	724023
63	3.2	0.0	0.0	chr11	99598330	99598392	(35488230)	+	(CT)n	Simple_repeat	1	63	(0)	724024
70	18.7	0.7	2.0	chr11	99598393	99598500	(35488122)	+	(TTCC)n	Simple_repeat	3	109	(0)	724025
107	20.0	7.2	1.9	chr11	101053490	101053835	(34032787)	+	(TCCT)n	Simple_repeat	1	371	(0)	725888
16	15.9	0.0	0.0	chr11	101054183	101054210	(34032412)	+	(T)n	Simple_repeat	1	28	(0)	725889
4728	10.3	3.2	1.7	chr11	101245263	101246073	(33840549)	+	Harlequin-int	LTR/ERV1	256	1078	(5818)	726121
1422	17.8	10.0	4.3	chr11	101246071	101246722	(33839900)	+	HERVIP10FH-int	LTR/ERV1	704	1411	(3691)	726120
38	27.1	2.8	2.8	chr11	102971518	102971658	(32114964)	+	GA-rich	Low_complexity	1	145	(0)	728769
1401	13.3	13.8	23.9	chr11	103518432	103518916	(31567706)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	729555
1636	21.2	4.7	0.3	chr11	103699294	103699657	(31386965)	C	L1MB7	LINE/L1	(7126)	391	11	729823
69	17.8	0.0	0.8	chr11	103699665	103699793	(31386829)	+	(TCCC)n	Simple_repeat	1	129	(0)	729827
432	22.6	18.4	0.0	chr11	103699794	103699895	(31386727)	C	FLAM_A	SINE/Alu	(16)	126	2	729828
13015	17.1	2.5	2.1	chr11	107738764	107742272	(27344350)	C	L1P4a	LINE/L1	(2956)	3527	3	735401
1933	13.5	0.0	0.7	chr11	107856413	107856694	(27229928)	+	AluSz	SINE/Alu	1	280	(32)	735671
341	23.5	9.0	2.9	chr11	107856695	107856709	(27229913)	C	MIRb	SINE/MIR	(148)	120	106	735672
17	10.7	0.0	3.0	chr11	107856727	107856759	(27229863)	+	(GGAG)n	Simple_repeat	1	33	(0)	735673
238	15.4	0.0	0.0	chr11	107856760	107856798	(27229824)	C	MIR	SINE/MIR	(134)	128	90	735672
45	25.0	0.7	2.9	chr11	107856800	107856935	(27229687)	+	G-rich	Low_complexity	1	137	(0)	735674
244	15.0	0.0	0.0	chr11	107856936	107856975	(27229647)	C	MIR	SINE/MIR	(133)	129	90	735675
21	6.8	0.0	0.0	chr11	107857022	107857052	(27229570)	+	(AGGA)n	Simple_repeat	1	31	(0)	735676
249	14.6	9.4	0.0	chr11	107857061	107857108	(27229514)	C	MIR1_Amn	SINE/MIR	(94)	136	84	735677
23	11.5	0.0	0.0	chr11	107857109	107857147	(27229475)	+	(AAGG)n	Simple_repeat	1	39	(0)	735678
238	15.4	0.0	0.0	chr11	107857148	107857186	(27229436)	C	MIR	SINE/MIR	(134)	128	90	735679
66	23.1	0.5	4.1	chr11	107857189	107857381	(27229241)	+	GA-rich	Low_complexity	1	194	(0)	735680
239	13.0	9.8	0.0	chr11	107857382	107857427	(27229195)	C	MIR1_Amn	SINE/MIR	(94)	136	86	735681
305	33.3	9.1	1.6	chr11	109015958	109016079	(26070543)	+	L2b	LINE/L2	3236	3367	(8)	737752
295	31.1	6.4	1.5	chr11	109151247	109151380	(25935242)	+	MIRb	SINE/MIR	108	248	(20)	737955
341	24.7	0.0	0.0	chr11	109151419	109151511	(25935111)	C	MLT1K	LTR/ERVL-MaLR	(28)	567	475	737956
4933	11.4	0.0	0.3	chr11	109151760	109152487	(25934135)	C	L1PB1	LINE/L1	(8)	6143	5418	737957
2384	8.1	0.0	0.7	chr11	110359343	110359640	(24726982)	C	AluY	SINE/Alu	(15)	296	1	739714
280	28.4	0.0	0.0	chr11	110359641	110359714	(24726908)	C	HAL1ME	LINE/L1	(514)	1951	1878	739713
59	28.6	1.1	1.1	chr11	110359757	110359936	(24726686)	+	(TCCT)n	Simple_repeat	1	182	(0)	739715
17231	13.4	3.6	4.0	chr11	111487364	111488863	(23597759)	+	L1MA2	LINE/L1	5308	6786	(779)	741446
12	22.7	0.0	2.6	chr11	111602442	111602479	(23484143)	+	G-rich	Low_complexity	1	38	(0)	741647
14	23.3	0.0	2.4	chr11	111602500	111602541	(23484081)	+	(CCGC)n	Simple_repeat	1	42	(0)	741648
280	29.8	3.8	7.6	chr11	111635169	111635305	(23451317)	+	MIR3	SINE/MIR	22	149	(59)	741706
17	21.9	2.9	5.6	chr11	111635343	111635411	(23451211)	+	A-rich	Low_complexity	1	71	(0)	741707
48	26.7	1.8	3.5	chr11	111635412	111635505	(23451117)	+	GA-rich	Low_complexity	5	170	(0)	741708
1027	25.1	10.1	10.9	chr11	113559017	113559485	(21527137)	C	MER31B	LTR/ERV1	(0)	466	2	744767
735	16.7	30.3	2.4	chr11	113635598	113635929	(21450693)	+	MER31B	LTR/ERV1	1	465	(1)	744910
13	18.3	0.0	7.0	chr11	114739238	114739280	(20347342)	+	(TAT)n	Simple_repeat	1	43	(0)	746635
67	0.0	0.0	0.0	chr11	114739281	114739340	(20347282)	+	(TTCC)n	Simple_repeat	1	60	(0)	746636
65	17.6	0.8	0.0	chr11	114739342	114739465	(20347157)	+	(CCCT)n	Simple_repeat	1	125	(0)	746637
2385	16.5	5.5	1.2	chr11	114739470	114739955	(20346667)	C	L1MA9	LINE/L1	(19)	6995	6488	746638
30	2.4	0.0	7.8	chr11	115958082	115958132	(19128490)	+	(CCTC)n	Simple_repeat	1	51	(0)	748490
99	21.0	0.9	1.8	chr11	115958135	115958361	(19128261)	+	(TTCC)n	Simple_repeat	1	229	(0)	748491
561	32.0	13.4	3.3	chr11	117702360	117702660	(17383962)	+	L2c	LINE/L2	3052	3387	(0)	751610
15	12.6	0.0	0.0	chr11	117854041	117854067	(17232555)	+	(CCTC)n	Simple_repeat	1	27	(0)	751858
347	31.7	7.4	9.3	chr11	117854502	117854845	(17231777)	C	L2c	LINE/L2	(27)	3360	3024	751859
931	28.2	3.0	2.7	chr11	120346210	120346544	(14740078)	C	MLT1I	LTR/ERVL-MaLR	(17)	394	59	756402
185	36.0	4.4	0.0	chr11	121476545	121476630	(13609992)	+	L2a	LINE/L2	3327	3416	(10)	758186
78	9.5	0.0	4.4	chr11	121476681	121476817	(13609805)	+	(CCTC)n	Simple_repeat	1	137	(0)	758187
1845	16.2	0.0	0.0	chr11	121476820	121477091	(13609531)	C	AluJr	SINE/Alu	(40)	272	1	758188
26	21.8	5.6	0.0	chr11	123358226	123358296	(11728326)	+	GA-rich	Low_complexity	1	75	(0)	761388
31	3.3	0.0	0.0	chr11	123430261	123430291	(11656331)	+	(CT)n	Simple_repeat	1	31	(0)	761530
318	33.6	1.6	3.9	chr11	124243611	124243740	(10842882)	C	L3b	LINE/CR1	(840)	3259	3133	762753
562	13.9	0.0	3.6	chr11	124243837	124243948	(10842674)	+	L1PA5	LINE/L1	6047	6154	(0)	762756
11	22.3	0.0	6.4	chr11	124244290	124244336	(10842286)	+	(TTATAA)n	Simple_repeat	1	47	(0)	762757
21562	14.2	2.4	3.0	chr11	124914031	124917864	(10168758)	C	L1M1	LINE/L1	(3749)	3816	8	763750
24	10.0	2.2	2.2	chr11	125164817	125164861	(9921761)	+	(GGC)n	Simple_repeat	1	46	(0)	764077
23	26.4	2.9	3.8	chr11	125164926	125165028	(9921594)	+	GA-rich	Low_complexity	1	106	(0)	764078
23	16.5	5.5	3.9	chr11	125165104	125165176	(9921446)	+	(GCC)n	Simple_repeat	1	77	(0)	764079
2890	25.9	8.6	2.6	chr11	125801497	125803796	(9282826)	C	L1M2	LINE/L1	(4089)	3476	1316	765102
3178	17.5	2.7	1.6	chr11	125874042	125875038	(9211584)	+	HUERS-P3-int	LTR/ERV1	25	1115	(7804)	765168
2321	10.0	12.5	1.1	chr11	125875049	125875422	(9211200)	C	MSTB2	LTR/ERVL-MaLR	(31)	426	4	765169
4625	24.1	7.5	5.6	chr11	125966154	125967278	(9119344)	+	L1MEg	LINE/L1	583	1770	(4314)	765302
448	34.7	1.3	0.7	chr11	128150582	128150732	(6935890)	+	MIRb	SINE/MIR	84	235	(33)	768503
60	0.0	0.0	0.0	chr11	128219391	128219441	(6867181)	+	(AC)n	Simple_repeat	1	51	(0)	768608
7537	20.2	7.8	4.7	chr11	129225119	129228448	(5858174)	+	L1M4	LINE/L1	848	4090	(2916)	769994
5217	18.5	15.0	11.8	chr11	129646214	129646976	(5439646)	+	L1MC1	LINE/L1	1326	2109	(4460)	770615
170	13.6	0.0	0.0	chr11	131633520	131633789	(3452833)	+	(TCTC)n	Simple_repeat	1	270	(0)	773586
17	12.5	0.0	0.0	chr11	131633789	131633814	(3452808)	+	(CA)n	Simple_repeat	1	26	(0)	773587
14	28.1	0.0	0.0	chr11	134083283	134083326	(1003296)	+	(TCTC)n	Simple_repeat	1	44	(0)	776771
1844	24.7	5.6	4.1	chr11	135060937	135061429	(25193)	+	MER67D	LTR/ERV1	14	514	(0)	777997
862	25.3	12.9	0.4	chr11	135061598	135061875	(24747)	C	MLT1D	LTR/ERVL-MaLR	(8)	497	180	777998
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
212	18.9	4.1	0.9	chr12	401991	402062	(132873247)	+	MIR3	SINE/MIR	113	189	(73)	778681
766	14.5	0.0	8.3	chr12	531961	532105	(132743204)	C	FLAM_C	SINE/Alu	(10)	133	1	778921
423	28.7	4.4	9.4	chr12	532106	532158	(132743151)	C	MIRb	SINE/MIR	(208)	60	12	778920
1672	21.0	9.9	1.4	chr12	532372	532797	(132742512)	C	MER31B	LTR/ERV1	(0)	466	1	778922
989	23.5	13.1	2.8	chr12	2070378	2070841	(131204468)	C	L1MEd	LINE/L1	(5412)	1674	1156	781643
130	15.7	4.7	4.5	chr12	2070843	2071172	(131204137)	+	(CTTC)n	Simple_repeat	1	334	(0)	781644
43	0.0	0.0	0.0	chr12	2071173	2071211	(131204098)	+	(CCTG)n	Simple_repeat	1	39	(0)	781645
130	15.7	4.7	4.5	chr12	2071212	2071239	(131204070)	+	(CTTC)n	Simple_repeat	3	27	(0)	781646
1559	19.3	1.1	2.8	chr12	2071241	2071525	(131203784)	C	AluJo	SINE/Alu	(32)	280	1	781647
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
288	24.8	8.9	4.2	chr12	3041488	3041605	(130233704)	+	MIRb	SINE/MIR	30	153	(115)	783185
30	5.5	0.0	0.0	chr12	3041668	3041705	(130233604)	+	(CCTCCCTG)n	Simple_repeat	1	38	(0)	783186
579	19.3	22.9	0.5	chr12	3041915	3042107	(130233202)	+	MIR	SINE/MIR	14	262	(0)	783187
572	26.6	1.4	0.0	chr12	3627839	3627977	(129647332)	+	MIRc	SINE/MIR	2	142	(126)	784148
96	30.4	0.4	0.4	chr12	3627991	3627999	(129647310)	+	(CTCT)n	Simple_repeat	1	65	(199)	784149
97	25.7	0.9	0.0	chr12	3628000	3628230	(129647079)	+	(TCCC)n	Simple_repeat	1	233	(0)	784150
96	30.4	0.4	0.4	chr12	3628231	3628253	(129647056)	+	(CTCT)n	Simple_repeat	66	264	(0)	784149
1477	21.1	4.3	11.4	chr12	4073591	4073760	(129201549)	+	MLT1A	LTR/ERVL-MaLR	1	162	(212)	784888
34	3.0	0.0	0.0	chr12	4073761	4073794	(129201515)	+	(TC)n	Simple_repeat	1	34	(0)	784889
1477	21.1	4.3	11.4	chr12	4073795	4073838	(129201471)	+	MLT1A	LTR/ERVL-MaLR	163	175	(199)	784888
45	2.4	0.0	0.0	chr12	4073839	4073881	(129201428)	+	(CT)n	Simple_repeat	1	43	(0)	784890
1477	21.1	4.3	11.4	chr12	4073882	4074067	(129201242)	+	MLT1A	LTR/ERVL-MaLR	176	372	(2)	784888
3218	9.0	4.3	6.7	chr12	4320213	4320318	(128954991)	C	LTR10F	LTR/ERV1	(408)	103	1	785339
886	19.3	23.5	7.6	chr12	4320348	4320728	(128954581)	C	MER31B	LTR/ERV1	(0)	466	7	785341
2541	7.3	0.0	0.6	chr12	5979760	5980072	(127295237)	+	AluY	SINE/Alu	1	311	(0)	787812
90	20.1	0.5	0.8	chr12	5980073	5980269	(127295040)	+	GA-rich	Low_complexity	1	196	(0)	787813
1069	25.2	5.2	2.0	chr12	5980270	5980565	(127294744)	+	L1MC5a	LINE/L1	2058	2363	(414)	787808
17	15.5	4.7	0.0	chr12	6936423	6936465	(126338844)	+	(TCCTCT)n	Simple_repeat	1	45	(0)	789666
56	3.5	0.0	0.0	chr12	6936717	6936775	(126338534)	+	(CAG)n	Simple_repeat	1	59	(0)	789667
1821	19.8	4.7	10.8	chr12	7241875	7242152	(126033157)	C	L1ME3	LINE/L1	(166)	5996	5705	790140
12	21.8	2.7	0.0	chr12	8692714	8692750	(124582559)	+	G-rich	Low_complexity	1	38	(0)	792734
27	0.0	0.0	0.0	chr12	10027518	10027543	(123247766)	+	(CTGC)n	Simple_repeat	1	26	(0)	794621
30	23.3	0.0	3.6	chr12	10027544	10027627	(123247682)	+	(TCCC)n	Simple_repeat	1	84	(0)	794622
47	10.7	3.3	0.0	chr12	10027651	10027741	(123247568)	+	(TC)n	Simple_repeat	1	94	(0)	794623
2245	7.3	3.0	0.0	chr12	10211957	10212242	(123063067)	C	AluSp	SINE/Alu	(17)	296	2	794931
65	21.9	1.2	3.0	chr12	11669311	11669476	(121605833)	+	(CTTC)n	Simple_repeat	1	168	(0)	796843
10228	15.7	6.5	8.8	chr12	12628795	12630842	(120644467)	C	L1MB7	LINE/L1	(694)	5044	2905	798468
31	3.0	0.0	0.0	chr12	13000447	13000480	(120274829)	+	(GCAGCAGT)n	Simple_repeat	1	34	(0)	799227
53	19.8	1.5	3.0	chr12	13146039	13146171	(120129138)	+	(TCCC)n	Simple_repeat	1	135	(0)	799444
446	30.2	0.0	0.8	chr12	13526949	13527065	(119748244)	C	L2a	LINE/L2	(1)	3425	3310	799965
79	24.7	3.2	0.5	chr12	14845511	14845727	(118429582)	+	GA-rich	Low_complexity	1	224	(0)	802005
53	12.4	6.4	0.9	chr12	14957808	14957916	(118317393)	+	GA-rich	Low_complexity	1	116	(0)	802165
768	25.6	9.6	0.4	chr12	15163551	15163797	(118111512)	C	LTR33A	LTR/ERVL	(0)	520	249	802426
598	30.4	3.5	0.5	chr12	15163930	15164121	(118111188)	C	LTR33A	LTR/ERVL	(322)	198	1	802426
16	10.4	0.0	5.7	chr12	15882461	15882495	(117392814)	+	(CCCT)n	Simple_repeat	1	35	(0)	803443
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
13018	15.1	8.5	3.8	chr12	19481779	19483618	(113791691)	C	L1PB2	LINE/L1	(4878)	1985	2	808267
11575	10.8	1.0	0.3	chr12	19582586	19584204	(113691105)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	808460
57	14.0	7.3	1.4	chr12	20164366	20164502	(113110807)	+	(CT)n	Simple_repeat	1	147	(0)	809314
534	33.5	4.6	5.3	chr12	20164515	20164889	(113110420)	C	LTR86A1	LTR/ERVL	(62)	451	80	809315
17511	17.2	2.7	0.5	chr12	20294636	20297798	(112977511)	C	L1PA15	LINE/L1	(1357)	5409	2147	809455
46	4.1	0.0	0.0	chr12	20297799	20297849	(112977460)	+	(CTCC)n	Simple_repeat	1	51	(0)	809457
7012	20.4	6.0	2.4	chr12	20297850	20299490	(112975819)	C	L1PA15	LINE/L1	(4639)	2146	497	809455
17	26.9	3.9	2.5	chr12	20368450	20368526	(112906783)	+	(TCCT)n	Simple_repeat	1	80	(0)	809554
1025	26.2	5.5	2.3	chr12	21736517	21736817	(111538492)	C	LTR16A1	LTR/ERVL	(0)	456	146	811180
99	18.9	0.0	0.0	chr12	21736819	21737004	(111538305)	+	(TCCC)n	Simple_repeat	1	186	(0)	811181
1560	8.7	0.5	0.0	chr12	21737006	21737201	(111538108)	C	AluSx1	SINE/Alu	(33)	279	83	811182
20	19.6	0.0	0.0	chr12	23111601	23111637	(110163672)	+	(GT)n	Simple_repeat	1	37	(0)	813169
69	32.1	4.7	0.3	chr12	23111851	23111916	(110163393)	+	(TCTC)n	Simple_repeat	1	290	(0)	813170
75	16.4	3.8	5.0	chr12	23111917	23112127	(110163182)	+	(TTCT)n	Simple_repeat	1	219	(0)	813171
257	25.0	0.0	3.2	chr12	23254865	23254926	(110020383)	C	MIRb	SINE/MIR	(31)	237	178	813361
18	27.2	1.7	1.7	chr12	23949251	23949309	(109326000)	+	GA-rich	Low_complexity	1	60	(0)	814232
15	29.1	5.1	0.0	chr12	23949700	23949731	(109325578)	+	(TC)n	Simple_repeat	1	33	(0)	814233
63	4.6	0.0	0.0	chr12	23949732	23949798	(109325511)	+	(CT)n	Simple_repeat	1	67	(0)	814234
15	29.1	5.1	0.0	chr12	23949799	23949824	(109325485)	+	(TC)n	Simple_repeat	2	29	(0)	814235
19	0.0	0.0	0.0	chr12	25276636	25276659	(107998650)	+	(AAC)n	Simple_repeat	1	24	(0)	816249
5473	19.0	3.9	3.1	chr12	25419274	25419750	(107855559)	C	L1ME1	LINE/L1	(1708)	4438	3952	816477
62	20.7	1.3	2.0	chr12	25419751	25419899	(107855410)	+	(CCTT)n	Simple_repeat	1	151	(0)	816482
341	22.6	1.4	0.0	chr12	25420016	25420103	(107855206)	C	L1ME4b	LINE/L1	(370)	5753	5683	816483
3501	26.2	10.8	9.0	chr12	26264942	26266910	(107008399)	C	L2a	LINE/L2	(0)	3426	1404	817727
1729	18.0	9.4	3.6	chr12	28416375	28416812	(104858497)	C	MER31B	LTR/ERV1	(0)	466	1	821034
2317	9.9	0.3	0.7	chr12	29221856	29222148	(104053161)	C	AluSx1	SINE/Alu	(20)	292	1	822087
1046	18.3	15.3	11.9	chr12	29222315	29222761	(104052548)	C	MER31B	LTR/ERV1	(0)	466	2	822088
1877	12.4	0.4	0.0	chr12	31579380	31579638	(101695671)	+	AluSx1	SINE/Alu	1	260	(52)	825552
19	3.8	0.0	0.0	chr12	31579639	31579665	(101695644)	+	(TTTA)n	Simple_repeat	1	27	(0)	825553
18	48.2	0.6	1.9	chr12	31579685	31579840	(101695469)	+	GA-rich	Low_complexity	1	157	(0)	825554
16	13.2	0.0	0.0	chr12	31579965	31579989	(101695320)	+	(AT)n	Simple_repeat	1	25	(0)	825555
2201	20.3	7.9	6.4	chr12	31629301	31629844	(101645465)	+	MER92B	LTR/ERV1	66	635	(1)	825666
1039	25.2	5.3	6.5	chr12	39461151	39461553	(93813756)	+	MLT1A1	LTR/ERVL-MaLR	11	408	(0)	832494
3110	26.1	3.5	4.0	chr12	39461554	39462753	(93812556)	+	MLT1A1-int	LTR/ERVL-MaLR	1	1370	(1)	832494
20	15.6	9.7	5.7	chr12	39637041	39637153	(93638156)	+	(TTTCTCC)n	Simple_repeat	1	124	(0)	832726
212	35.5	3.1	6.5	chr12	40051040	40051208	(93224101)	C	L2c	LINE/L2	(33)	3354	3192	833227
411	38.4	6.5	3.2	chr12	40051389	40051732	(93223577)	C	L2b	LINE/L2	(0)	3375	3020	833228
236	32.3	4.1	3.1	chr12	40715998	40716093	(92559216)	C	MIRb	SINE/MIR	(8)	260	164	834081
48	23.5	3.9	4.8	chr12	40716219	40716416	(92558893)	+	(CTC)n	Simple_repeat	1	196	(0)	834082
246	26.9	3.7	0.0	chr12	40764069	40764120	(92511189)	C	MLT1H2	LTR/ERVL-MaLR	(367)	122	69	834158
2336	21.0	1.6	3.6	chr12	40764215	40764738	(92510571)	C	MER67D	LTR/ERV1	(1)	513	1	834159
303	31.3	1.5	5.1	chr12	41645507	41645644	(91629665)	+	L1MEg	LINE/L1	1823	1955	(4129)	835325
91	35.7	1.8	0.0	chr12	41645650	41645979	(91629330)	+	GA-rich	Low_complexity	1	336	(0)	835326
2452	10.3	0.3	0.0	chr12	42304149	42304449	(90970860)	+	AluSc5	SINE/Alu	5	306	(3)	836395
1407	27.3	9.3	6.3	chr12	42304450	42304590	(90970719)	C	L2a	LINE/L2	(690)	2729	2572	836393
2262	12.2	0.0	2.0	chr12	42304591	42304894	(90970415)	+	AluSx3	SINE/Alu	1	298	(13)	836396
12	16.5	0.0	0.0	chr12	43835773	43835799	(89439510)	+	(CGGCC)n	Simple_repeat	1	27	(0)	838633
14	18.5	4.8	6.2	chr12	43835973	43836034	(89439275)	+	(GCG)n	Simple_repeat	1	65	(0)	838634
227	30.3	2.6	1.3	chr12	44065827	44065903	(89209406)	+	LTR101_Mam	LTR/ERVL	284	361	(468)	838972
2069	12.3	10.7	0.0	chr12	44065913	44066270	(89209039)	C	MER57B1	LTR/ERV1	(0)	401	1	838973
25	43.1	2.0	2.9	chr12	44694990	44695193	(88580116)	+	A-rich	Low_complexity	1	208	(0)	839797
258	2.6	0.0	0.0	chr12	44695272	44695309	(88580000)	+	Alu	SINE/Alu	263	300	(1)	839798
1935	16.0	6.0	14.1	chr12	48420323	48420868	(84854441)	+	MER67D	LTR/ERV1	1	499	(15)	845172
351	29.6	10.1	1.1	chr12	48420915	48421095	(84854214)	C	L1ME5	LINE/L1	(20)	6174	5976	845173
1968	15.9	7.6	3.0	chr12	48421098	48421499	(84853810)	C	MSTA	LTR/ERVL-MaLR	(2)	426	5	845174
31	25.4	2.9	4.9	chr12	48815413	48815551	(84459758)	+	GA-rich	Low_complexity	1	143	(0)	845854
65913	4.9	0.5	0.5	chr12	50903257	50911052	(82364257)	C	HERV17-int	LTR/ERV1	(3)	8623	823	850220
34	4.9	2.4	0.0	chr12	50911053	50911094	(82364215)	+	(CT)n	Simple_repeat	1	43	(0)	850221
65913	7.9	0.1	1.0	chr12	50911095	50911839	(82363470)	C	HERV17-int	LTR/ERV1	(7804)	822	2	850220
15	32.3	0.0	1.6	chr12	51083338	51083400	(82191909)	+	(CCG)n	Simple_repeat	1	63	(0)	850560
400	25.4	12.2	3.2	chr12	52443086	52443211	(80832098)	+	MIRb	SINE/MIR	18	156	(112)	852958
393	34.4	4.8	4.8	chr12	52443212	52443440	(80831869)	+	L1M4	LINE/L1	4280	4508	(1638)	852959
247	23.0	2.1	3.5	chr12	52443474	52443571	(80831738)	+	L1M1	LINE/L1	1356	1408	(6088)	852960
1672	17.6	3.0	2.6	chr12	53631834	53632135	(79643174)	+	AluJr4	SINE/Alu	1	303	(9)	855125
101	24.9	0.4	1.2	chr12	53632136	53632383	(79642926)	+	GA-rich	Low_complexity	1	249	(0)	855126
1613	19.4	1.2	2.8	chr12	53632386	53632762	(79642547)	C	L1M4	LINE/L1	(2560)	4084	3718	855120
13	8.5	4.0	0.0	chr12	54017052	54017076	(79258233)	+	(GGGGA)n	Simple_repeat	1	26	(0)	855759
26	18.7	1.6	1.6	chr12	54017343	54017405	(79257904)	+	GA-rich	Low_complexity	1	64	(0)	855760
1698	16.9	4.4	0.0	chr12	55840045	55840305	(77435004)	+	AluJb	SINE/Alu	2	274	(38)	858333
80	15.5	0.0	3.7	chr12	55840320	55840480	(77434829)	+	GA-rich	Low_complexity	1	161	(0)	858334
19	0.0	0.0	0.0	chr12	56521503	56521523	(76753786)	+	(T)n	Simple_repeat	1	21	(0)	859704
40	30.4	1.2	3.6	chr12	56521846	56522008	(76753301)	+	(CCTC)n	Simple_repeat	1	165	(0)	859705
1441	16.4	0.0	10.2	chr12	56753024	56753346	(76521963)	+	AluJb	SINE/Alu	4	293	(19)	860186
2721	15.7	6.6	0.8	chr12	56753397	56753922	(76521387)	C	MER89	LTR/ERV1	(0)	559	1	860187
12	5.6	0.0	0.0	chr12	57454604	57454622	(75820687)	+	(CAC)n	Simple_repeat	1	19	(0)	861360
12	17.9	3.1	0.0	chr12	57460123	57460154	(75815155)	+	(CCACC)n	Simple_repeat	1	33	(0)	861366
13	17.8	0.0	6.8	chr12	57460146	57460189	(75815120)	+	(CCCAG)n	Simple_repeat	1	44	(0)	861367
11	27.7	0.0	0.0	chr12	57460155	57460161	(75815148)	+	(CCCACAC)n	Simple_repeat	1	39	(0)	861368
312	21.9	2.4	2.4	chr12	58371479	58371562	(74903747)	C	MLT1J	LTR/ERVL-MaLR	(76)	436	353	862671
2183	17.4	9.9	1.1	chr12	58371747	58372205	(74903104)	C	MER67D	LTR/ERV1	(0)	514	11	862672
41173	4.3	0.6	0.5	chr12	58852938	58858140	(74417169)	C	HERV17-int	LTR/ERV1	(2607)	6019	704	863331
96	6.1	7.2	1.4	chr12	58858141	58858334	(74416975)	+	(TC)n	Simple_repeat	1	208	(0)	863332
3705	7.6	6.9	0.1	chr12	58858335	58858993	(74416316)	C	HERV17-int	LTR/ERV1	(7923)	703	1	863331
566	28.8	1.5	0.0	chr12	59097488	59097619	(74177690)	C	MIR	SINE/MIR	(114)	148	15	863669
33	27.8	3.4	3.9	chr12	59097695	59097844	(74177465)	+	A-rich	Low_complexity	1	149	(0)	863670
994	32.1	9.6	4.1	chr12	62363115	62363805	(70911504)	+	L2a	LINE/L2	2689	3402	(24)	867809
551	28.7	9.8	1.1	chr12	63137781	63138058	(70137251)	+	L2a	LINE/L2	1139	1443	(1976)	869034
60	1.6	1.5	1.5	chr12	63138060	63138125	(70137184)	+	(TCCT)n	Simple_repeat	1	67	(0)	869035
4812	18.6	2.4	1.9	chr12	63138137	63139115	(70136194)	C	L1MC3	LINE/L1	(936)	6849	5866	869036
13409	19.5	6.6	8.5	chr12	63314618	63318259	(69957050)	C	MER52-int	LTR/ERV1	(3518)	3573	7	869255
642	29.2	2.3	3.2	chr12	64172109	64172327	(69102982)	C	MLT1N2	LTR/ERVL-MaLR	(8)	554	338	870600
87	24.8	2.2	0.4	chr12	64172357	64172585	(69102724)	+	GA-rich	Low_complexity	1	234	(0)	870601
239	29.3	11.2	3.9	chr12	64608868	64609023	(68666286)	+	MIR	SINE/MIR	33	201	(61)	871472
366	23.8	3.7	3.7	chr12	64609274	64609382	(68665927)	+	MIRc	SINE/MIR	102	210	(58)	871473
18	10.8	7.1	5.0	chr12	64696002	64696085	(68579224)	+	(CTTTC)n	Simple_repeat	1	85	(0)	871646
49	1.9	0.0	3.5	chr12	64696086	64696143	(68579166)	+	(CCTC)n	Simple_repeat	1	58	(0)	871647
18	29.3	3.6	1.1	chr12	64696144	64696153	(68579156)	+	(TTCC)n	Simple_repeat	4	13	(0)	871648
36	2.9	0.0	0.0	chr12	65533360	65533394	(67741915)	+	(CT)n	Simple_repeat	1	35	(0)	872929
29	15.0	0.0	0.0	chr12	65881616	65881668	(67393641)	+	GA-rich	Low_complexity	1	53	(0)	873490
797	29.8	4.0	0.8	chr12	67044849	67045088	(66230221)	C	MIR	SINE/MIR	(3)	259	12	875308
21	32.9	0.8	4.1	chr12	67269580	67269701	(66005608)	+	(GCGGCG)n	Simple_repeat	1	123	(0)	875650
49	31.7	3.7	0.5	chr12	68224583	68224786	(65050523)	+	GA-rich	Low_complexity	1	210	(0)	877032
269	23.7	0.0	0.0	chr12	68224787	68224845	(65050464)	+	L2a	LINE/L2	3368	3426	(0)	877033
4968	10.3	2.7	3.8	chr12	69229833	69230697	(64044612)	+	L1MA1	LINE/L1	3711	4565	(1581)	878943
693	17.9	4.8	4.1	chr12	69230699	69230844	(64044465)	+	MSTA	LTR/ERVL-MaLR	153	299	(129)	878947
13	12.8	2.6	5.1	chr12	70242939	70242976	(63032333)	+	(GGAGTGA)n	Simple_repeat	1	39	(0)	880614
27	6.1	0.0	0.0	chr12	70242991	70243025	(63032284)	+	(AACACA)n	Simple_repeat	1	35	(0)	880615
14	26.2	1.7	3.4	chr12	70243653	70243710	(63031599)	+	GA-rich	Low_complexity	1	59	(0)	880616
14	23.2	3.9	1.9	chr12	70243682	70243733	(63031576)	+	(GGT)n	Simple_repeat	1	54	(0)	880617
1559	19.7	3.7	0.4	chr12	70730551	70730814	(62544495)	+	AluJr4	SINE/Alu	1	273	(39)	881344
102	16.1	3.6	7.2	chr12	70730826	70731159	(62544150)	+	GA-rich	Low_complexity	1	346	(0)	881345
505	16.2	15.9	2.6	chr12	76772051	76772164	(56503145)	C	MIR	SINE/MIR	(30)	232	101	889829
1635	22.3	4.2	1.8	chr12	78294912	78295304	(54980005)	+	MER92A	LTR/ERV1	10	412	(0)	891946
220	36.8	0.8	3.9	chr12	78295401	78295530	(54979779)	+	L3	LINE/CR1	3972	4097	(2)	891945
1287	23.6	6.4	6.5	chr12	78708333	78708890	(54566419)	C	MER67C	LTR/ERV1	(7)	507	2	892522
11	24.6	0.0	2.5	chr12	78864493	78864532	(54410777)	+	(CCCCTCC)n	Simple_repeat	1	40	(0)	892740
19	12.9	0.0	2.7	chr12	78864795	78864831	(54410478)	+	(GCA)n	Simple_repeat	1	37	(0)	892741
184	32.4	6.2	1.9	chr12	80360110	80360216	(52915093)	+	L2c	LINE/L2	3264	3375	(12)	894906
265	24.6	6.8	0.0	chr12	80360150	80360218	(52915091)	+	MIR	SINE/MIR	185	258	(4)	894907
70	23.8	2.4	0.0	chr12	80360339	80360507	(52914802)	+	(TC)n	Simple_repeat	1	173	(0)	894908
2136	10.0	0.7	0.0	chr12	80360509	80360778	(52914531)	C	AluSc8	SINE/Alu	(38)	273	2	894909
60	13.7	0.0	0.0	chr12	82386414	82386544	(50888765)	+	(CCTC)n	Simple_repeat	1	131	(0)	897692
566	29.7	9.6	8.3	chr12	84904003	84904224	(48371085)	+	MLT1H2	LTR/ERVL-MaLR	100	310	(239)	900910
30	0.0	0.0	0.0	chr12	84904225	84904250	(48371059)	+	(GA)n	Simple_repeat	1	26	(0)	900911
602	23.8	9.9	2.6	chr12	84904251	84904471	(48370838)	+	MLT1H2	LTR/ERVL-MaLR	311	549	(0)	900910
15	15.2	2.0	7.7	chr12	85280157	85280207	(47995102)	+	(TCCC)n	Simple_repeat	1	52	(0)	901404
15	29.4	1.6	1.5	chr12	85280565	85280628	(47994681)	+	(GGAAGGT)n	Simple_repeat	1	65	(0)	901405
19	11.4	2.6	0.0	chr12	85280930	85280967	(47994342)	+	(AAACAAA)n	Simple_repeat	1	39	(0)	901406
24	8.8	0.0	0.0	chr12	86199106	86199142	(47076167)	+	(CTG)n	Simple_repeat	1	37	(0)	902630
1432	12.9	1.0	0.5	chr12	88518960	88519161	(44756148)	C	AluSx1	SINE/Alu	(109)	203	1	905597
7452	12.6	2.6	2.9	chr12	89767974	89769143	(43506166)	C	ERVL-B4-int	LTR/ERVL	(0)	5714	4549	907558
22167	15.1	2.2	2.1	chr12	89769142	89771604	(43503705)	C	ERVL-B4-int	LTR/ERVL	(2052)	3662	1244	907558
532	33.0	5.6	4.2	chr12	90888009	90888416	(42386893)	+	L2b	LINE/L2	1650	2063	(1356)	909193
797	28.5	5.9	11.1	chr12	92133209	92133622	(41141687)	+	L2a	LINE/L2	3031	3421	(5)	911003
700	30.0	9.4	5.5	chr12	93014269	93014780	(40260529)	C	L2	LINE/L2	(2467)	952	419	912549
73	29.5	2.9	0.0	chr12	93368820	93369063	(39906246)	+	(CTCT)n	Simple_repeat	1	251	(0)	913302
1923	9.9	2.7	4.4	chr12	93369205	93369501	(39905808)	+	MER4D	LTR/ERV1	139	430	(473)	913303
13	18.9	4.5	2.2	chr12	93571265	93571308	(39704001)	+	(CGGCG)n	Simple_repeat	1	46	(0)	913737
30	18.5	2.7	1.3	chr12	93571496	93571570	(39703739)	+	(CTCC)n	Simple_repeat	1	77	(0)	913738
1690	14.3	1.9	1.3	chr12	94349487	94349797	(38925512)	+	L1M3	LINE/L1	3848	4160	(1980)	915072
4279	19.5	7.3	1.3	chr12	94349792	94350948	(38924361)	+	L1M3	LINE/L1	4270	5484	(687)	915072
115	31.3	2.4	4.2	chr12	96502956	96503491	(36771818)	+	(TTCT)n	Simple_repeat	1	549	(0)	919214
294	32.0	3.9	3.9	chr12	96503636	96503762	(36771547)	+	MIRb	SINE/MIR	133	259	(9)	919215
810	32.6	9.8	7.8	chr12	96749715	96750285	(36525024)	C	L1MEj	LINE/L1	(1490)	670	86	919631
31	0.0	0.0	0.0	chr12	96750286	96750314	(36524995)	+	(GCA)n	Simple_repeat	1	29	(0)	919634
810	32.6	9.8	7.8	chr12	96750315	96750392	(36524917)	C	L1MEj	LINE/L1	(2075)	85	8	919631
2180	9.1	1.4	0.0	chr12	97414117	97414391	(35860918)	+	AluSq2	SINE/Alu	6	284	(29)	920663
26	0.0	0.0	0.0	chr12	97414392	97414416	(35860893)	+	(AAAC)n	Simple_repeat	1	25	(0)	920664
79	21.3	0.0	1.2	chr12	97414446	97414616	(35860693)	+	(TCCC)n	Simple_repeat	1	171	(0)	920665
5432	12.9	1.2	4.3	chr12	98792320	98793340	(34481969)	C	L1MA6	LINE/L1	(10)	6290	5302	922942
1810	11.3	4.2	0.0	chr12	98793340	98793657	(34481652)	+	L1MA6	LINE/L1	4982	5313	(830)	922942
88	20.3	1.1	0.0	chr12	102523789	102523969	(30751340)	+	GA-rich	Low_complexity	1	183	(0)	929155
5918	3.2	0.9	0.0	chr12	103625366	103626058	(29649251)	C	L1PA4	LINE/L1	(2)	6153	5455	930961
1268	16.8	0.0	1.4	chr12	103626125	103626335	(29648974)	+	MER3	DNA/hAT-Charlie	2	209	(0)	930962
414	29.3	8.5	0.0	chr12	103626354	103626493	(29648816)	+	MIRb	SINE/MIR	26	178	(90)	930963
2209	23.5	8.8	1.1	chr12	103632211	103632822	(29642487)	C	LTR41B	LTR/ERVL	(9)	749	87	930979
29	10.5	0.0	0.0	chr12	103733743	103733793	(29541516)	+	(ATGATCATAT)n	Simple_repeat	1	51	(0)	931179
2246	11.0	0.3	0.0	chr12	103768153	103768444	(29506865)	+	AluSx	SINE/Alu	1	293	(19)	931262
73	24.9	0.0	0.6	chr12	103768495	103768666	(29506643)	+	GA-rich	Low_complexity	1	172	(0)	931263
347	27.6	3.3	4.0	chr12	103768826	103768976	(29506333)	C	MLT1L	LTR/ERVL-MaLR	(35)	575	426	931264
249	31.5	7.8	7.8	chr12	103878617	103878974	(29396335)	C	LTR85b	LTR/Gypsy?	(150)	634	277	931455
38	0.0	0.0	0.0	chr12	104007234	104007266	(29268043)	+	(CT)n	Simple_repeat	1	33	(0)	931688
303	23.0	32.8	6.5	chr12	104007500	104007716	(29267593)	+	L1ME4a	LINE/L1	5813	6095	(29)	931689
37	28.8	6.3	1.5	chr12	106583059	106583097	(26692212)	+	(CTCT)n	Simple_repeat	1	68	(133)	936458
20	27.5	1.3	3.9	chr12	106583098	106583119	(26692190)	+	(TCCTT)n	Simple_repeat	1	75	(0)	936459
27	11.1	1.9	1.9	chr12	106583120	106583171	(26692138)	+	(TCTTT)n	Simple_repeat	1	53	(0)	936460
37	28.8	6.3	1.5	chr12	106583174	106583247	(26692062)	+	(CTCT)n	Simple_repeat	69	201	(0)	936458
2414	15.1	7.0	0.0	chr12	108387414	108387811	(24887498)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	940175
2081	21.6	7.7	4.4	chr12	108387816	108388314	(24886995)	C	MLT2B1	LTR/ERVL	(3)	517	1	940176
916	31.4	8.5	11.7	chr12	111304479	111305246	(21970063)	C	MamGypLTR3a	LTR/Gypsy	(2)	979	239	946756
1672	15.9	0.0	8.7	chr12	111580195	111580527	(21694782)	+	AluJo	SINE/Alu	1	304	(8)	947394
482	20.8	8.6	0.0	chr12	111580552	111580647	(21694662)	+	FLAM_A	SINE/Alu	23	127	(15)	947395
30	35.6	4.2	1.5	chr12	111580651	111580858	(21694451)	+	GA-rich	Low_complexity	1	213	(0)	947396
17	16.6	6.4	0.0	chr12	111598828	111598874	(21676435)	+	(CGAGGA)n	Simple_repeat	1	50	(0)	947447
74	1.4	0.0	0.0	chr12	111598950	111599019	(21676290)	+	(GCT)n	Simple_repeat	1	70	(0)	947448
15	24.7	3.8	0.0	chr12	111599329	111599381	(21675928)	+	G-rich	Low_complexity	1	55	(0)	947449
14	13.2	2.9	2.8	chr12	111599379	111599413	(21675896)	+	(CCGCC)n	Simple_repeat	1	36	(0)	947450
16	0.0	4.3	0.0	chr12	112117034	112117056	(21158253)	+	(AAT)n	Simple_repeat	1	24	(0)	948521
1694	17.9	1.0	1.7	chr12	113335558	113335859	(19939450)	C	AluJb	SINE/Alu	(2)	310	11	951316
924	12.5	0.0	4.2	chr12	113335863	113335969	(19939340)	C	AluJr4	SINE/Alu	(170)	142	41	951317
31	11.2	0.0	0.0	chr12	113478478	113478526	(19796783)	+	(GT)n	Simple_repeat	1	49	(0)	951680
308	27.9	1.4	5.0	chr12	114012237	114012351	(19262958)	+	MIRc	SINE/MIR	1	106	(124)	952981
418	28.2	2.5	0.4	chr12	114012355	114012470	(19262839)	C	MIR	SINE/MIR	(36)	232	117	952982
293	17.2	1.9	4.2	chr12	114012487	114013190	(19262119)	+	GA-rich	Low_complexity	1	717	(0)	952983
333	17.6	0.9	13.6	chr12	114063758	114063882	(19211427)	+	LTR10F	LTR/ERV1	85	193	(318)	953073
33	2.4	7.0	0.0	chr12	114302222	114302264	(18973045)	+	(TC)n	Simple_repeat	1	46	(0)	953425
37	20.0	1.2	0.0	chr12	114684052	114684132	(18591177)	+	GA-rich	Low_complexity	1	82	(0)	954267
13	15.7	8.1	4.5	chr12	114684550	114684611	(18590698)	+	(GAGGCAG)n	Simple_repeat	1	67	(0)	954268
67	21.3	6.1	4.7	chr12	114698553	114698832	(18576477)	+	(TCTTC)n	Simple_repeat	1	297	(0)	954286
51	22.5	1.5	0.8	chr12	115000485	115000578	(18274731)	+	GA-rich	Low_complexity	1	94	(0)	955056
1719	13.1	12.4	0.0	chr12	115000579	115000846	(18274463)	+	AluSx	SINE/Alu	1	306	(6)	955057
3886	16.8	1.9	1.7	chr12	115315673	115316429	(17958880)	+	L1MA10	LINE/L1	4531	5288	(852)	955754
38	9.9	0.0	5.4	chr12	115316430	115316503	(17958806)	+	GA-rich	Low_complexity	1	74	(0)	955755
137	14.6	2.0	1.1	chr12	115316502	115316756	(17958553)	+	A-rich	Low_complexity	1	260	(0)	955756
33	4.3	0.0	3.9	chr12	115452217	115452268	(17823041)	+	(CTCCC)n	Simple_repeat	1	52	(0)	956041
25	21.4	0.0	0.0	chr12	115452362	115452454	(17822855)	+	(GT)n	Simple_repeat	1	93	(0)	956042
29	28.8	6.1	1.2	chr12	115452607	115452769	(17822540)	+	(TCCCTC)n	Simple_repeat	1	173	(0)	956043
518	27.9	13.7	2.5	chr12	116091625	116091948	(17183361)	+	L2	LINE/L2	1877	2242	(1177)	957347
1503	25.8	8.3	3.8	chr12	116994389	116994947	(16280362)	C	L1ME4b	LINE/L1	(3)	889	303	959387
82	11.2	2.3	0.0	chr12	117262406	117262534	(16012775)	+	(GA)n	Simple_repeat	1	132	(0)	959930
50	5.5	1.2	4.7	chr12	117264513	117264597	(16010712)	+	(CCTT)n	Simple_repeat	1	86	(0)	959940
55	23.3	2.1	1.4	chr12	117264598	117264727	(16010582)	+	(CT)n	Simple_repeat	2	132	(0)	959941
1810	12.4	8.7	0.4	chr12	117264728	117265002	(16010307)	C	AluSq	SINE/Alu	(13)	300	1	959942
466	20.8	1.5	1.0	chr12	117321899	117322909	(15952400)	+	(TCCT)n	Simple_repeat	1	1026	(0)	960067
52	12.9	1.1	1.1	chr12	117968580	117968669	(15306640)	+	GA-rich	Low_complexity	1	91	(0)	961511
33	16.5	1.1	6.5	chr12	117968829	117968920	(15306389)	+	(TGC)n	Simple_repeat	1	93	(0)	961512
13	18.8	0.0	5.0	chr12	117968993	117969032	(15306277)	+	G-rich	Low_complexity	1	40	(0)	961513
12	5.5	0.0	0.0	chr12	117969131	117969149	(15306160)	+	(GGA)n	Simple_repeat	1	19	(0)	961514
587	32.7	7.9	2.8	chr12	118098475	118098763	(15176546)	C	L2b	LINE/L2	(34)	3341	3037	961833
48	31.4	6.2	1.9	chr12	118608826	118609114	(14666195)	+	GA-rich	Low_complexity	1	307	(0)	962955
2440	8.4	0.0	0.3	chr12	119973603	119973901	(13301408)	+	AluSx3	SINE/Alu	1	298	(13)	965964
56	17.9	0.9	0.9	chr12	119973909	119974021	(13301288)	+	G-rich	Low_complexity	1	114	(0)	965965
2522	7.7	0.3	0.3	chr12	119974047	119974357	(13300952)	+	AluSx3	SINE/Alu	1	311	(0)	965966
427	28.0	9.3	0.0	chr12	121859553	121859725	(11415584)	C	MIRb	SINE/MIR	(25)	205	14	970491
397	28.7	1.0	0.5	chr12	124438671	124439853	(8835456)	+	GA-rich	Low_complexity	1	1195	(0)	976059
2089	13.8	0.0	0.0	chr12	124734090	124734385	(8540924)	C	AluJo	SINE/Alu	(16)	296	1	976701
462	25.5	11.6	0.7	chr12	124734584	124734729	(8540580)	C	MLT1J	LTR/ERVL-MaLR	(489)	164	1	976695
1436	0.0	7.5	0.0	chr12	125409559	125411209	(7864100)	+	(AGTGG)n	Simple_repeat	1	1775	(0)	978195
2079	6.7	0.0	1.5	chr12	125411252	125411524	(7863785)	+	L1PA7	LINE/L1	5884	6152	(2)	978196
107	29.8	4.7	0.5	chr12	126898489	126898896	(6376413)	+	GA-rich	Low_complexity	1	427	(0)	980582
494	10.8	3.4	0.2	chr12	127568278	127569090	(5706219)	+	(AG)n	Simple_repeat	1	841	(0)	981696
271	19.4	2.5	1.3	chr12	128971284	128971888	(4303421)	+	(CCCT)n	Simple_repeat	1	620	(0)	984243
86	21.9	1.8	2.6	chr12	129828625	129828847	(3446462)	+	GA-rich	Low_complexity	1	227	(0)	985709
356	28.4	3.4	2.8	chr12	129829014	129829158	(3446151)	+	MLT1L	LTR/ERVL-MaLR	463	608	(2)	985707
191	28.6	3.1	1.6	chr12	130666585	130666648	(2608661)	+	L2b	LINE/L2	3306	3370	(5)	987006
270	21.8	1.4	1.4	chr12	130666649	130667273	(2608036)	+	G-rich	Low_complexity	1	634	(0)	987007
360	28.0	6.4	7.4	chr12	130667321	130667509	(2607800)	C	LTR33	LTR/ERVL	(13)	502	316	987008
49	15.2	2.5	4.1	chr12	130716302	130716420	(2558889)	+	G-rich	Low_complexity	1	122	(0)	987100
20	21.7	0.0	3.5	chr12	130716504	130716560	(2558749)	+	G-rich	Low_complexity	1	57	(0)	987101
28	21.6	0.0	0.0	chr12	130716611	130716666	(2558643)	+	(AC)n	Simple_repeat	1	56	(0)	987102
80	14.9	5.3	3.6	chr12	131680979	131681186	(1594123)	+	GA-rich	Low_complexity	1	219	(0)	988442
235	26.8	2.3	9.9	chr12	131681187	131681327	(1593982)	+	MLT1K	LTR/ERVL-MaLR	399	528	(67)	988443
472	31.4	3.5	1.8	chr12	132296689	132296912	(978397)	C	MSTD	LTR/ERVL-MaLR	(32)	364	137	989305
895	19.3	0.7	0.3	chr12	132376802	132378551	(896758)	+	GA-rich	Low_complexity	1	1762	(0)	989392
215	34.1	5.8	0.0	chr12	132437337	132437418	(837891)	+	L2b	LINE/L2	3288	3374	(1)	989455
86	16.2	2.8	4.1	chr12	132437435	132437647	(837662)	+	GA-rich	Low_complexity	1	219	(0)	989456
5974	15.1	5.6	0.3	chr12	132629257	132630307	(645002)	C	Tigger1	DNA/TcMar-Tigger	(1278)	1140	31	989685
1344	21.6	18.6	3.5	chr12	132683107	132683532	(591777)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	989765
377	32.9	9.6	5.4	chr12	132683533	132683865	(591444)	+	L4_B_Mam	LINE/RTE-X	4155	4496	(445)	989764
3522	18.7	7.5	3.1	chr12	133100476	133101027	(174282)	C	MER44C	DNA/TcMar-Tigger	(142)	591	1	990510
5690	16.5	8.1	3.6	chr12	133101028	133101455	(173854)	C	L1MC1	LINE/L1	(4995)	1592	1119	990494
12	15.6	3.5	0.0	chr12	133130499	133130527	(144782)	+	(GTGT)n	Simple_repeat	1	30	(0)	990566
741	14.3	8.1	1.8	chr13	25212595	25212845	(89151483)	+	MER31B	LTR/ERV1	1	413	(53)	1001474
1970	15.7	7.6	2.8	chr13	25212856	25213239	(89151089)	+	MSTB1	LTR/ERVL-MaLR	7	410	(22)	1001475
22	31.1	4.6	0.0	chr13	25729034	25729120	(88635208)	+	(TC)n	Simple_repeat	1	91	(0)	1002217
227	32.8	12.0	0.8	chr13	25729387	25729512	(88634816)	C	MIRb	SINE/MIR	(37)	231	90	1002218
1571	16.4	5.0	1.5	chr13	27063572	27063839	(87300489)	+	AluJo	SINE/Alu	1	278	(34)	1004258
5223	17.5	6.3	3.0	chr13	27063840	27064975	(87299353)	+	L1MB4	LINE/L1	5134	6166	(14)	1004255
1393	26.9	10.3	2.7	chr13	27442009	27442978	(86921350)	+	L2a	LINE/L2	2335	3388	(38)	1004956
23	16.9	3.8	0.0	chr13	29428565	29428617	(84935711)	+	(CCCT)n	Simple_repeat	1	55	(0)	1008152
12	13.2	5.7	2.7	chr13	29428645	29428679	(84935649)	+	(CCT)n	Simple_repeat	1	37	(0)	1008153
1042	17.2	1.0	11.2	chr13	31523899	31524131	(82840197)	C	AluJr	SINE/Alu	(101)	211	3	1011446
1225	21.1	10.2	4.0	chr13	31524239	31524656	(82839672)	C	MER31B	LTR/ERV1	(0)	543	1	1011447
67	0.0	0.0	0.0	chr13	35476297	35476355	(78887973)	+	(CTG)n	Simple_repeat	1	59	(0)	1017168
16	22.0	2.3	2.2	chr13	35476620	35476663	(78887665)	+	(GT)n	Simple_repeat	1	45	(0)	1017169
3208	12.1	0.8	1.6	chr13	35981629	35982011	(78382317)	C	L1MB3	LINE/L1	(364)	5819	5436	1017899
1029	16.7	1.2	1.7	chr13	35982234	35982407	(78381921)	+	AluJo	SINE/Alu	137	309	(3)	1017901
21	0.0	0.0	0.0	chr13	35982410	35982432	(78381896)	+	(GA)n	Simple_repeat	1	23	(0)	1017902
50	0.0	0.0	0.0	chr13	35982434	35982478	(78381850)	+	(GGGA)n	Simple_repeat	1	45	(0)	1017903
14	36.1	2.8	3.6	chr13	36783098	36783205	(77581123)	+	A-rich	Low_complexity	1	111	(0)	1019039
33	22.4	2.4	1.1	chr13	36783115	36783199	(77581129)	+	GA-rich	Low_complexity	1	87	(0)	1019040
2721	3.7	0.0	0.0	chr13	37000064	37000363	(77363965)	+	AluY	SINE/Alu	1	300	(11)	1019396
13	25.8	1.9	3.6	chr13	37009723	37009776	(77354552)	+	(GCT)n	Simple_repeat	1	55	(0)	1019411
999	31.1	15.7	2.3	chr13	37326761	37327620	(77036708)	C	L2a	LINE/L2	(43)	3383	2387	1019854
67	28.6	1.9	0.5	chr13	37526810	37527014	(76837314)	+	(CTTT)n	Simple_repeat	1	209	(0)	1020128
19762	12.0	6.8	0.9	chr13	38089529	38090816	(76273512)	C	MER57A-int	LTR/ERV1	(2618)	3569	2185	1020813
2268	18.2	6.9	14.2	chr13	38090817	38091480	(76272848)	C	LTR9	LTR/ERV1	(0)	612	1	1020815
53	21.0	0.9	0.0	chr13	38149224	38149336	(76214992)	+	(TCTC)n	Simple_repeat	1	114	(0)	1020869
2919	12.1	6.5	5.4	chr13	38982603	38983177	(75381151)	+	PRIMA4_LTR	LTR/ERV1	1	582	(12)	1022000
582	25.0	6.2	0.6	chr13	38983221	38983401	(75380927)	+	MER67C	LTR/ERV1	319	510	(4)	1021997
29	9.8	0.0	0.0	chr13	40459066	40459110	(73905218)	+	(AGGG)n	Simple_repeat	1	45	(0)	1024141
1489	10.8	17.6	0.0	chr13	40652288	40652536	(73711792)	C	AluSx1	SINE/Alu	(10)	302	1	1024448
346	21.9	0.0	0.0	chr13	41060737	41060809	(73303519)	C	tRNA-Glu-GAG_	tRNA	(2)	73	1	1025161
13	10.4	6.2	0.0	chr13	41060893	41060914	(73303414)	+	(CTG)n	Simple_repeat	1	24	(0)	1025162
35	0.0	0.0	0.0	chr13	41060915	41060946	(73303382)	+	(GCC)n	Simple_repeat	1	32	(0)	1025163
10189	13.9	5.7	3.4	chr13	43056899	43059152	(71305176)	C	L1PB1	LINE/L1	(4349)	2514	3	1028332
32	25.1	2.0	2.0	chr13	43318969	43319066	(71045262)	+	G-rich	Low_complexity	1	100	(0)	1028705
11	23.8	8.5	0.0	chr13	43785834	43785892	(70578436)	+	(GTGGCC)n	Simple_repeat	1	64	(0)	1029331
1202	21.6	4.4	0.0	chr13	44035353	44035570	(70328758)	+	AluJb	SINE/Alu	85	312	(0)	1029680
28	19.5	1.6	0.0	chr13	44035571	44035631	(70328697)	+	GA-rich	Low_complexity	1	62	(0)	1029681
783	25.3	10.4	3.6	chr13	44035638	44036075	(70328253)	+	HAL1	LINE/L1	1869	2340	(167)	1029679
16	5.3	0.0	0.0	chr13	44447829	44447848	(69916480)	+	(T)n	Simple_repeat	1	20	(0)	1030314
275	13.0	23.3	0.0	chr13	44447849	44447917	(69916411)	C	MER31B	LTR/ERV1	(26)	440	351	1030315
22	11.8	0.0	0.0	chr13	44574547	44574586	(69789742)	+	(TGTTGC)n	Simple_repeat	1	40	(0)	1030509
291	30.0	12.4	2.0	chr13	46203011	46203255	(68161073)	C	Charlie29a	DNA/hAT-Charlie	(262)	457	184	1033511
201	26.7	0.0	0.0	chr13	46203283	46203327	(68161001)	+	L2	LINE/L2	2818	2862	(557)	1033512
17	24.5	2.5	4.9	chr13	48234590	48234668	(66129660)	+	(TAATA)n	Simple_repeat	1	81	(0)	1036516
465	23.6	20.7	4.3	chr13	49343263	49343470	(65020858)	C	MIR	SINE/MIR	(2)	260	10	1038225
60	13.8	5.8	0.0	chr13	49343559	49343679	(65020649)	+	GA-rich	Low_complexity	1	128	(0)	1038226
235	31.4	4.4	3.4	chr13	49343702	49343790	(65020538)	C	L2c	LINE/L2	(225)	3162	3073	1038223
326	23.5	3.4	0.0	chr13	49586808	49586892	(64777436)	+	MER67B	LTR/ERV1	574	661	(0)	1038639
192	23.8	0.0	0.0	chr13	49586915	49586956	(64777372)	+	L2c	LINE/L2	3101	3142	(245)	1038640
230	28.2	16.7	0.9	chr13	49587113	49587223	(64777105)	+	L2c	LINE/L2	3251	3382	(5)	1038640
2290	11.5	0.3	0.0	chr13	49829339	49829675	(64534653)	+	AluSq2	SINE/Alu	1	313	(0)	1039128
2213	15.5	6.6	7.0	chr13	49829878	49830335	(64533993)	C	MER31B	LTR/ERV1	(8)	458	3	1039129
821	16.5	0.0	0.8	chr13	49956018	49956150	(64408178)	C	FLAM_C	SINE/Alu	(11)	132	1	1039392
5972	17.0	7.3	2.8	chr13	49956151	49956233	(64408095)	C	MER21-int	LTR/ERVL	(2893)	1298	1231	1039387
29	2.0	5.4	5.1	chr13	49956251	49956306	(64408022)	+	(CTC)n	Simple_repeat	1	59	(0)	1039393
41	11.9	1.1	2.1	chr13	49956311	49956405	(64407923)	+	(TGC)n	Simple_repeat	1	96	(0)	1039394
38	30.8	1.9	7.8	chr13	49956406	49956663	(64407665)	+	(TTCT)n	Simple_repeat	1	243	(0)	1039395
1044	15.1	0.7	0.0	chr13	49956665	49956816	(64407512)	C	FRAM	SINE/Alu	(3)	173	21	1039396
3275	23.6	19.5	1.1	chr13	49956818	49957771	(64406557)	C	FordPrefect	DNA/hAT-Tip100	(229)	1454	318	1039397
1948	26.0	7.2	6.8	chr13	50345411	50345828	(64018500)	C	L1ME3D	LINE/L1	(10)	6232	5802	1039989
66	2.9	1.4	0.0	chr13	50345829	50345899	(64018429)	+	(CCCT)n	Simple_repeat	1	72	(0)	1039990
1948	26.0	7.2	6.8	chr13	50345900	50346264	(64018064)	C	L1ME3D	LINE/L1	(441)	5801	5446	1039989
33	16.2	3.1	0.0	chr13	50522161	50522224	(63842104)	+	GA-rich	Low_complexity	1	66	(0)	1040250
12	20.2	0.0	6.7	chr13	50522459	50522503	(63841825)	+	(AATTTA)n	Simple_repeat	1	45	(0)	1040251
331	27.7	8.6	3.9	chr13	50916493	50916646	(63447682)	+	X7B_LINE	LINE/CR1	78	239	(11)	1040835
728	20.0	2.9	0.0	chr13	52038574	52038708	(62325620)	C	AluJo	SINE/Alu	(145)	167	29	1042463
919	14.0	0.0	0.7	chr13	52038710	52038845	(62325483)	+	AluJo	SINE/Alu	168	302	(10)	1042464
181	34.1	13.1	1.9	chr13	52038847	52039386	(62324942)	C	L2	LINE/L2	(1504)	1915	1306	1042462
1620	27.6	14.1	2.3	chr13	52039434	52039823	(62324505)	C	L1MEd	LINE/L1	(5736)	1350	912	1042465
188	35.1	0.0	2.5	chr13	52382061	52382139	(61982189)	+	MIRb	SINE/MIR	13	89	(179)	1043022
2538	19.1	5.3	1.4	chr13	53276180	53276673	(61087655)	+	MER67D	LTR/ERV1	1	514	(0)	1044417
195	23.9	2.0	3.1	chr13	54017717	54018196	(60346132)	+	GA-rich	Low_complexity	1	475	(0)	1045406
416	31.1	8.7	3.1	chr13	55253531	55253789	(59110539)	+	L2	LINE/L2	779	1053	(2366)	1046931
1391	31.9	13.2	0.9	chr13	55253838	55254640	(59109688)	+	L2	LINE/L2	1352	2268	(1151)	1046931
27	23.8	0.0	0.0	chr13	56134195	56134261	(58230067)	+	GA-rich	Low_complexity	1	67	(0)	1048006
612	33.6	6.3	2.2	chr13	56134426	56134943	(58229385)	C	ERVL-E-int	LTR/ERVL	(1287)	4367	3754	1048005
376	28.8	5.8	3.3	chr13	57223921	57224103	(57140225)	+	L1ME2z	LINE/L1	5477	5664	(500)	1049292
59	27.2	2.0	2.5	chr13	57224104	57224303	(57140025)	+	GA-rich	Low_complexity	1	204	(0)	1049293
1072	29.1	7.1	1.8	chr13	57224312	57224765	(57139563)	+	L1ME2z	LINE/L1	5671	6150	(294)	1049292
264	28.3	14.9	0.0	chr13	58730142	58730261	(55634067)	C	L2a	LINE/L2	(8)	3418	3278	1051133
686	29.7	12.9	7.5	chr13	58730278	58730714	(55633614)	C	LTR16D	LTR/ERVL	(4)	647	184	1051134
85	3.5	0.0	0.0	chr13	59756410	59756497	(54607831)	+	(AAGG)n	Simple_repeat	1	88	(0)	1052536
19	7.2	0.0	0.0	chr13	59756498	59756526	(54607802)	+	(CAGG)n	Simple_repeat	1	29	(0)	1052537
39	4.7	0.0	0.0	chr13	59756527	59756571	(54607757)	+	(AGGG)n	Simple_repeat	1	45	(0)	1052538
241	5.1	4.9	2.5	chr13	60282893	60282932	(54081396)	C	MLT2B1	LTR/ERVL	(0)	559	519	1053278
38	5.0	0.0	0.0	chr13	60282935	60282976	(54081352)	+	(TC)n	Simple_repeat	1	42	(0)	1053279
49	19.1	1.4	5.6	chr13	60282977	60283118	(54081210)	+	(CCTC)n	Simple_repeat	1	144	(0)	1053280
93	22.9	4.3	1.7	chr13	61416052	61416330	(52947998)	+	(TCCT)n	Simple_repeat	1	291	(0)	1054743
320	19.6	8.1	1.1	chr13	61416380	61416503	(52947825)	+	MIRc	SINE/MIR	29	162	(68)	1054744
651	22.1	0.0	3.3	chr13	61870654	61870775	(52493553)	C	AluJr	SINE/Alu	(194)	118	1	1055296
305	38.2	2.4	0.0	chr13	61882624	61882746	(52481582)	+	L2b	LINE/L2	3233	3358	(17)	1055315
49	13.8	2.1	1.1	chr13	61898778	61898870	(52465458)	+	(TCCC)n	Simple_repeat	1	95	(0)	1055337
2220	24.8	8.1	8.7	chr13	61898872	61899986	(52464342)	+	Charlie1a	DNA/hAT-Charlie	187	1294	(161)	1055338
234	24.4	10.9	1.2	chr13	61998264	61998346	(52365982)	+	Tigger5b	DNA/TcMar-Tigger	381	472	(0)	1055467
3488	15.9	2.9	1.3	chr13	61998462	61999066	(52365262)	C	LTR27D	LTR/ERV1	(0)	615	1	1055468
472	28.4	9.9	3.4	chr13	62003794	62004114	(52360214)	+	L1M4	LINE/L1	2200	2543	(4197)	1055473
1636	14.6	3.0	0.3	chr13	62020436	62020731	(52343597)	+	L1PA8	LINE/L1	5867	6170	(2)	1055501
1807	13.6	3.4	5.3	chr13	62028238	62028538	(52335790)	+	AluSx1	SINE/Alu	1	295	(17)	1055511
38	12.6	0.0	0.0	chr13	62028554	62028615	(52335713)	+	(AGGG)n	Simple_repeat	1	62	(0)	1055512
1429	22.5	6.5	4.2	chr13	62044429	62044890	(52319438)	+	MER67C	LTR/ERV1	67	506	(8)	1055530
821	32.1	6.6	3.5	chr13	62309902	62310324	(52054004)	C	LTR16	LTR/ERVL	(1)	437	1	1055839
773	34.8	4.8	2.1	chr13	62310325	62310752	(52053576)	C	ERV3-16A3_I-int	LTR/ERVL	(0)	5226	4787	1055839
2268	22.4	2.0	2.5	chr13	62334704	62335265	(52029063)	+	MER89	LTR/ERV1	1	559	(0)	1055882
1057	17.8	8.2	7.6	chr13	62335266	62335470	(52028858)	+	MER92C	LTR/ERV1	365	569	(21)	1055881
13	19.0	6.0	5.6	chr13	62335585	62335595	(52028733)	+	GA-rich	Low_complexity	1	27	(44)	1055883
13	20.6	2.4	2.4	chr13	62335596	62335636	(52028692)	+	A-rich	Low_complexity	1	42	(0)	1055884
13	19.0	6.0	5.6	chr13	62335637	62335651	(52028677)	+	GA-rich	Low_complexity	28	71	(0)	1055883
570	27.3	11.9	9.6	chr13	62454233	62454897	(51909431)	C	LTR41C	LTR/ERVL	(2)	699	18	1056026
1681	19.3	0.3	2.3	chr13	63022119	63022418	(51341910)	+	AluJo	SINE/Alu	2	295	(17)	1056724
5767	15.6	3.4	0.3	chr13	63517091	63518125	(50846203)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(0)	1068	1	1057390
1252	29.7	9.6	2.2	chr13	63729912	63730586	(50633742)	C	L2a	LINE/L2	(180)	3246	2508	1057661
236	37.3	9.4	4.4	chr13	64258836	64259609	(50104719)	+	L2c	LINE/L2	2570	3386	(1)	1058295
219	32.8	9.6	9.0	chr13	64327579	64327856	(50036472)	+	L2c	LINE/L2	2953	3232	(155)	1058397
8685	7.4	2.0	0.9	chr13	64707949	64708293	(49656035)	C	HERV17-int	LTR/ERV1	(7435)	1191	836	1058889
4819	9.8	7.1	0.4	chr13	64708337	64709067	(49655261)	C	HERVK14-int	LTR/ERVK	(5312)	784	1	1058886
985	22.0	1.7	6.0	chr13	65118890	65119139	(49245189)	+	AluJo	SINE/Alu	66	304	(8)	1059359
665	26.3	9.1	0.0	chr13	65523143	65523332	(48840996)	+	Tigger17c	DNA/TcMar-Tigger	2	210	(978)	1059913
331	32.9	3.1	2.5	chr13	65523359	65523520	(48840808)	+	MIRb	SINE/MIR	4	166	(102)	1059914
234	21.5	12.2	3.0	chr13	65523569	65523635	(48840693)	+	Tigger17	DNA/TcMar-Tigger	2578	2651	(22)	1059915
6113	15.9	0.5	0.7	chr13	65926675	65927645	(48436683)	C	LTR1D	LTR/ERV1	(0)	975	7	1060398
16	16.2	0.0	0.0	chr13	66416320	66416347	(47947981)	+	A-rich	Low_complexity	1	28	(0)	1061003
190	34.4	17.2	4.8	chr13	66416684	66417016	(47947312)	+	L3	LINE/CR1	3476	3858	(241)	1061004
1496	20.5	5.1	16.4	chr13	66509125	66509617	(47854711)	+	MER67D	LTR/ERV1	21	447	(67)	1061121
803	20.7	0.0	0.0	chr13	66509618	66509752	(47854576)	C	FLAM_C	SINE/Alu	(8)	135	1	1061122
1496	20.5	5.1	16.4	chr13	66509753	66509819	(47854509)	+	MER67D	LTR/ERV1	448	514	(0)	1061121
89	22.5	2.1	3.9	chr13	66811560	66811838	(47552490)	+	(TTCC)n	Simple_repeat	1	285	(0)	1061490
2072	20.7	6.1	5.3	chr13	66890371	66890876	(47473452)	+	MER67D	LTR/ERV1	1	510	(4)	1061586
1622	22.9	2.4	4.7	chr13	66890877	66891198	(47473130)	C	L1ME1	LINE/L1	(103)	6076	5762	1061585
24	13.9	0.0	5.5	chr13	67112608	67112646	(47251682)	+	(TTTC)n	Simple_repeat	1	36	(0)	1061868
30	7.6	0.0	0.0	chr13	67112647	67112688	(47251640)	+	(CTCC)n	Simple_repeat	1	42	(0)	1061869
24	13.9	0.0	5.5	chr13	67112689	67112707	(47251621)	+	(TTTC)n	Simple_repeat	3	20	(0)	1061870
1329	14.9	0.9	5.5	chr13	67112716	67112950	(47251378)	C	AluJb	SINE/Alu	(8)	304	81	1061871
2317	11.4	0.0	0.0	chr13	67164296	67164603	(47199725)	+	AluSg7	SINE/Alu	2	309	(0)	1061935
305	34.4	12.3	3.3	chr13	67164650	67165076	(47199252)	+	L2a	LINE/L2	2947	3417	(9)	1061936
23	25.0	1.8	0.0	chr13	67230277	67230331	(47133997)	+	(CT)n	Simple_repeat	1	56	(0)	1062005
1378	20.7	3.3	7.7	chr13	67371151	67371317	(46993011)	C	MER67C	LTR/ERV1	(309)	402	260	1062192
2696	4.2	0.3	1.3	chr13	67371318	67371629	(46992699)	C	AluYm1	SINE/Alu	(2)	309	1	1062193
52	0.0	0.0	0.0	chr13	67656824	67656870	(46707458)	+	(AGC)n	Simple_repeat	1	47	(0)	1062546
232	23.7	0.0	4.8	chr13	67657075	67657136	(46707192)	+	LTR33B	LTR/ERVL	444	502	(1)	1062547
368	32.5	6.7	0.0	chr13	67657148	67657301	(46707027)	+	ERVL-E-int	LTR/ERVL	14	178	(5489)	1062547
19433	8.2	1.0	0.4	chr13	67898020	67901597	(46462731)	+	L1PA7	LINE/L1	2556	6151	(3)	1062844
473	21.0	1.0	0.0	chr13	67901599	67901712	(46462616)	+	L1MB3	LINE/L1	4568	4695	(2311)	1062843
231	10.5	2.6	0.0	chr13	67901723	67901760	(46462568)	+	MADE1	DNA/TcMar-Mariner	1	39	(41)	1062845
1973	15.0	0.4	0.0	chr13	67901762	67902069	(46462259)	C	AluSg	SINE/Alu	(0)	310	1	1062846
30	19.0	1.5	0.0	chr13	68136877	68136942	(46227386)	+	(TATG)n	Simple_repeat	1	67	(0)	1063147
357	34.3	8.9	3.8	chr13	68136945	68137156	(46227172)	C	LTR40A1	LTR/ERVL	(86)	498	275	1063148
596	27.3	6.7	7.2	chr13	68137167	68137400	(46226928)	C	L1M5	LINE/L1	(2290)	3856	3626	1063146
1872	18.3	0.9	2.3	chr13	68900787	68901138	(45463190)	+	Tigger3a	DNA/TcMar-Tigger	2	348	(0)	1064114
413	29.0	2.1	1.1	chr13	68901140	68901324	(45463004)	C	L1ME1	LINE/L1	(1197)	4949	4763	1064113
721	28.3	4.5	2.0	chr13	68901323	68901628	(45462700)	C	L1ME1	LINE/L1	(1729)	4417	4104	1064113
4710	13.1	0.9	7.0	chr13	69404098	69404937	(44959391)	+	LTR1A2	LTR/ERV1	50	837	(0)	1064738
20327	14.0	5.9	1.2	chr13	69423236	69425891	(44938437)	+	L1PB1	LINE/L1	2	2972	(3890)	1064764
27	0.0	0.0	0.0	chr13	70139352	70139383	(44224945)	+	(TAC)n	Simple_repeat	1	32	(0)	1065732
51	0.0	0.0	0.0	chr13	70139384	70139429	(44224899)	+	(CTG)n	Simple_repeat	1	46	(0)	1065733
633	31.6	4.9	5.3	chr13	70203162	70203757	(44160571)	+	L1ME3D	LINE/L1	5468	6080	(162)	1065828
1042	25.5	12.0	0.9	chr13	70203758	70204074	(44160254)	+	LTR18A	LTR/ERVL	1	357	(0)	1065829
293	28.8	2.1	8.9	chr13	70204075	70204191	(44160137)	+	L1ME3D	LINE/L1	6073	6123	(0)	1065828
1818	12.5	4.7	0.4	chr13	71846359	71846622	(42517706)	+	AluSz	SINE/Alu	1	276	(36)	1067995
16	12.1	0.0	0.0	chr13	71846627	71846654	(42517674)	+	(ATAG)n	Simple_repeat	1	28	(0)	1067996
18	20.1	4.2	2.0	chr13	71865798	71865845	(42498483)	+	(CG)n	Simple_repeat	1	50	(0)	1068015
63	5.7	0.0	0.0	chr13	71866281	71866354	(42497974)	+	(GCT)n	Simple_repeat	1	74	(0)	1068016
28	19.0	0.0	1.6	chr13	71866385	71866446	(42497882)	+	(CGC)n	Simple_repeat	1	62	(0)	1068017
50	10.8	0.0	0.0	chr13	71866471	71866551	(42497777)	+	(CCG)n	Simple_repeat	1	81	(0)	1068018
15	22.4	0.0	6.8	chr13	71866669	71866727	(42497601)	+	(GAGGTG)n	Simple_repeat	1	59	(0)	1068020
13	26.4	0.0	3.8	chr13	71867035	71867087	(42497241)	+	G-rich	Low_complexity	1	53	(0)	1068021
245	36.0	8.6	0.7	chr13	72322305	72322444	(42041884)	C	MER91A	DNA/hAT-Tip100	(20)	176	25	1068634
40	18.7	2.3	0.0	chr13	72322477	72322563	(42041765)	+	GA-rich	Low_complexity	1	89	(0)	1068635
6728	7.5	2.0	0.3	chr13	72322625	72323977	(42040351)	+	L1PA6	LINE/L1	4786	6153	(1)	1068636
8245	16.6	2.0	0.4	chr13	72714122	72715507	(41648821)	+	MSTA-int	LTR/ERVL-MaLR	240	1649	(2)	1069219
2113	15.4	5.0	7.1	chr13	72715518	72715911	(41648417)	+	MSTA	LTR/ERVL-MaLR	5	389	(39)	1069219
2073	14.2	0.7	0.3	chr13	72715912	72716214	(41648114)	C	AluSx1	SINE/Alu	(7)	305	2	1069220
19	29.1	0.0	0.0	chr13	74306903	74306956	(40057372)	+	(TC)n	Simple_repeat	1	54	(0)	1071788
1677	24.2	6.9	2.3	chr13	74669388	74669826	(39694502)	+	MLT1A-int	LTR/ERVL-MaLR	1271	1731	(4)	1072257
440	22.0	7.7	8.9	chr13	74669835	74670010	(39694318)	+	MLT1A	LTR/ERVL-MaLR	20	187	(187)	1072257
16	10.8	3.2	0.0	chr13	74670021	74670051	(39694277)	+	(CCTC)n	Simple_repeat	1	32	(0)	1072258
691	23.2	4.7	1.2	chr13	74670060	74670225	(39694103)	+	MLT1A	LTR/ERVL-MaLR	203	374	(0)	1072257
1055	20.7	8.4	1.4	chr13	74670226	74670500	(39693828)	+	BLACKJACK	DNA/hAT-Blackjack	595	890	(2079)	1072259
1030	20.0	1.2	0.0	chr13	75083905	75084074	(39280254)	+	AluJr	SINE/Alu	107	278	(34)	1072817
56	18.9	0.0	0.0	chr13	75084114	75084220	(39280108)	+	GA-rich	Low_complexity	1	107	(0)	1072818
6015	21.1	4.5	2.2	chr13	75084223	75086840	(39277488)	+	L1M4	LINE/L1	2878	5668	(976)	1072814
198	40.0	11.9	3.9	chr13	75419737	75420121	(38944207)	C	L2b	LINE/L2	(4)	3371	2952	1073300
2126	11.0	0.0	2.1	chr13	76381394	76381675	(37982653)	C	AluSx1	SINE/Alu	(36)	276	1	1074646
1167	21.2	10.1	12.4	chr13	76381758	76382094	(37982234)	C	MER67C	LTR/ERV1	(3)	511	180	1074647
2016	4.7	0.0	0.4	chr13	76382095	76382348	(37981980)	+	L1PA5	LINE/L1	5902	6154	(0)	1074648
1506	19.5	2.7	11.4	chr13	76811170	76811362	(37552966)	+	MLT1A	LTR/ERVL-MaLR	1	163	(211)	1075263
32	11.2	1.7	0.0	chr13	76811363	76811420	(37552908)	+	(CT)n	Simple_repeat	1	59	(0)	1075264
1506	19.5	2.7	11.4	chr13	76811421	76811637	(37552691)	+	MLT1A	LTR/ERVL-MaLR	164	374	(0)	1075263
22	20.3	0.0	0.0	chr13	77979948	77979994	(36384334)	+	GA-rich	Low_complexity	1	47	(0)	1076915
4404	19.3	4.1	0.2	chr13	78180298	78181165	(36183163)	C	Tigger6a	DNA/TcMar-Tigger	(180)	903	1	1077178
16	19.0	2.3	0.0	chr13	78219863	78219872	(36144456)	+	(TTG)n	Simple_repeat	1	11	(0)	1077226
1786	19.1	7.6	1.1	chr13	78219873	78220242	(36144086)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1077227
2416	18.2	7.0	0.4	chr13	79050791	79051270	(35313058)	C	MER67D	LTR/ERV1	(0)	514	1	1078368
196	29.9	2.9	0.0	chr13	79224684	79224750	(35139578)	+	L2a	LINE/L2	3357	3425	(1)	1078631
69	17.9	0.8	0.7	chr13	79224751	79224884	(35139444)	+	G-rich	Low_complexity	1	135	(0)	1078632
261	28.2	0.0	0.0	chr13	79225161	79225231	(35139097)	+	LTR88c	LTR/Gypsy?	3	73	(789)	1078633
277	25.0	6.2	0.0	chr13	79406598	79406673	(34957655)	+	Charlie17	DNA/hAT-Charlie	2834	2914	(2)	1078871
1032	10.7	5.1	2.3	chr13	79486797	79486968	(34877360)	+	Tigger3c	DNA/TcMar-Tigger	361	537	(65)	1079018
782	22.9	3.3	0.0	chr13	79486942	79487116	(34877212)	C	MLT1A	LTR/ERVL-MaLR	(193)	181	1	1079019
2226	15.5	10.8	9.4	chr13	79487146	79487738	(34876590)	C	L1ME2z	LINE/L1	(384)	6060	5459	1079015
401	30.4	7.7	4.5	chr13	79910068	79910267	(34454061)	C	MIRb	SINE/MIR	(54)	214	8	1079563
51	20.2	0.9	0.9	chr13	80684674	80684785	(33679543)	+	(TCCC)n	Simple_repeat	1	113	(0)	1080617
1129	21.8	0.5	0.5	chr13	80929481	80929700	(33434628)	+	AluJb	SINE/Alu	90	309	(3)	1080908
13	21.8	1.4	8.6	chr13	80981033	80981101	(33383227)	+	A-rich	Low_complexity	1	70	(0)	1080974
359	14.3	0.0	0.0	chr13	80981107	80981162	(33383166)	+	AluSz6	SINE/Alu	243	298	(14)	1080975
102	17.7	0.0	0.5	chr13	80981167	80981353	(33382975)	+	GA-rich	Low_complexity	1	187	(0)	1080976
282	16.7	15.4	0.0	chr13	80981460	80981525	(33382803)	C	MIRc	SINE/MIR	(82)	186	106	1080977
26	0.0	0.0	0.0	chr13	80981529	80981553	(33382775)	+	(T)n	Simple_repeat	1	25	(0)	1080978
533	26.0	10.7	0.0	chr13	81280814	81280963	(33083365)	+	MIR	SINE/MIR	31	198	(64)	1081370
667	20.0	4.9	5.9	chr13	81607285	81607602	(32756726)	+	MER31B	LTR/ERV1	15	543	(0)	1081766
224	39.7	6.0	0.6	chr13	81607685	81607859	(32756469)	C	MIR3	SINE/MIR	(7)	201	17	1081767
53	14.6	1.1	0.0	chr13	82542797	82542890	(31821438)	+	GA-rich	Low_complexity	1	95	(0)	1082901
1667	21.4	6.0	3.3	chr13	82661015	82661469	(31702859)	C	LTR7C	LTR/ERV1	(0)	471	4	1083049
872	23.2	2.8	5.1	chr13	82698959	82699227	(31665101)	C	MER31B	LTR/ERV1	(3)	511	76	1083100
871	18.0	9.1	0.6	chr13	82846177	82846337	(31517991)	+	AluSp	SINE/Alu	138	313	(0)	1083266
417	15.2	0.8	2.5	chr13	82846353	82847145	(31517183)	+	GA-rich	Low_complexity	1	799	(0)	1083267
31	3.0	0.0	0.0	chr13	85262094	85262127	(29102201)	+	(TTCC)n	Simple_repeat	1	34	(0)	1086306
26	28.2	1.3	0.0	chr13	85262132	85262208	(29102120)	+	(TCCC)n	Simple_repeat	1	78	(0)	1086307
634	31.8	12.0	2.1	chr13	86196211	86196842	(28167486)	C	L2a	LINE/L2	(50)	3376	2673	1087464
267	33.2	14.4	3.8	chr13	86196843	86197077	(28167251)	+	MIRb	SINE/MIR	2	265	(3)	1087465
130	27.1	3.4	1.0	chr13	86431125	86431693	(27932635)	+	(TA)n	Simple_repeat	1	582	(0)	1087715
228	10.5	5.0	0.0	chr13	86431801	86431838	(27932490)	C	MER31B	LTR/ERV1	(31)	435	396	1087716
328	25.3	14.7	1.2	chr13	86431811	86431915	(27932413)	C	MER67C	LTR/ERV1	(43)	471	356	1087717
605	20.7	0.0	0.7	chr13	86431916	86432051	(27932277)	+	L1MA8	LINE/L1	6157	6291	(0)	1087718
328	25.3	14.7	1.2	chr13	86432052	86432109	(27932219)	C	MER67C	LTR/ERV1	(159)	355	283	1087717
1095	24.0	5.2	2.8	chr13	86432087	86432472	(27931856)	C	MER67C	LTR/ERV1	(306)	405	4	1087717
1112	35.5	5.6	3.3	chr13	86576721	86577881	(27786447)	C	ERVL47-int	LTR/ERVL	(3374)	2673	1528	1087927
42	20.8	1.1	1.0	chr13	86578111	86578205	(27786123)	+	(TCCC)n	Simple_repeat	1	96	(0)	1087928
318	7.1	0.0	0.0	chr13	86578244	86578285	(27786043)	C	MLT1A0	LTR/ERVL-MaLR	(309)	56	15	1087929
878	26.9	5.8	5.1	chr13	86614656	86615075	(27749253)	+	MLT1A	LTR/ERVL-MaLR	1	391	(17)	1087974
662	34.9	4.8	1.4	chr13	86859959	86860240	(27504088)	C	LTR33B	LTR/ERVL	(204)	299	8	1088234
309	21.0	3.6	0.0	chr13	87629037	87629117	(26735211)	+	L1M4	LINE/L1	4747	4830	(1316)	1089262
1067	26.5	7.5	7.3	chr13	88315829	88316227	(26048101)	C	MLT1E2	LTR/ERVL-MaLR	(23)	604	205	1090154
348	13.5	4.4	1.6	chr13	88347567	88348274	(26016054)	+	GA-rich	Low_complexity	1	739	(0)	1090202
920	22.4	1.8	0.0	chr13	88438464	88438628	(25925700)	+	AluJr	SINE/Alu	137	304	(8)	1090309
120	21.4	0.8	0.8	chr13	88438645	88438905	(25925423)	+	G-rich	Low_complexity	1	263	(0)	1090310
294	23.2	2.4	1.2	chr13	88981574	88981656	(25382672)	C	MER67C	LTR/ERV1	(0)	514	431	1091008
990	22.9	10.5	1.3	chr13	88981741	88982050	(25382278)	C	MER67C	LTR/ERV1	(306)	405	64	1091008
1825	12.2	9.4	1.4	chr13	91149851	91150031	(23214297)	+	THE1D	LTR/ERVL-MaLR	1	210	(171)	1093855
49	2.2	0.0	0.0	chr13	91150032	91150077	(23214251)	+	(TC)n	Simple_repeat	1	46	(0)	1093856
1825	12.2	9.4	1.4	chr13	91150078	91150245	(23214083)	+	THE1D	LTR/ERVL-MaLR	211	380	(1)	1093855
20	23.2	5.2	1.2	chr13	91398518	91398594	(22965734)	+	G-rich	Low_complexity	1	81	(0)	1094194
35	24.4	0.0	0.0	chr13	91398651	91398731	(22965597)	+	(GGC)n	Simple_repeat	1	81	(0)	1094195
2015	13.1	12.4	1.3	chr13	91869648	91870027	(22494301)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1094856
16	8.0	0.0	3.5	chr13	92356151	92356179	(22008149)	+	(ATTT)n	Simple_repeat	1	29	(0)	1095453
1152	28.4	10.9	2.0	chr13	92356227	92356686	(22007642)	C	L2	LINE/L2	(414)	3005	2500	1095454
1941	26.9	7.0	5.5	chr13	92578992	92579242	(21785086)	C	LTR102_Mam	LTR/ERVL	(1)	850	594	1095756
63	7.8	0.0	0.0	chr13	92579243	92579325	(21785003)	+	(CTCC)n	Simple_repeat	1	83	(0)	1095757
1941	26.3	6.3	6.5	chr13	92579326	92579975	(21784353)	C	LTR102_Mam	LTR/ERVL	(258)	593	4	1095756
10260	13.7	2.1	0.3	chr13	92693231	92694832	(21669496)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	1095918
1665	13.8	8.9	1.7	chr13	92694833	92695185	(21669143)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1095918
1345	22.2	8.2	3.9	chr13	92775996	92776551	(21587777)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	14	1095998
513	28.0	12.7	4.1	chr13	92827163	92827505	(21536823)	+	LTR81B	LTR/Gypsy	102	478	(915)	1096056
3883	18.3	5.0	1.2	chr13	93367297	93368229	(20996099)	C	L1MDa	LINE/L1	(2838)	3699	2729	1096807
37	10.0	1.5	2.9	chr13	93368232	93368299	(20996029)	+	(CTCC)n	Simple_repeat	1	69	(0)	1096808
95	6.9	0.0	0.8	chr13	93368302	93368425	(20995903)	+	(TCCT)n	Simple_repeat	1	124	(0)	1096809
2436	4.8	1.0	7.5	chr13	93506759	93507090	(20857238)	+	AluY	SINE/Alu	1	310	(1)	1096979
11	19.5	3.9	5.6	chr13	93562329	93562380	(20801948)	+	(ATATAAC)n	Simple_repeat	1	54	(0)	1097047
2235	19.8	3.1	4.4	chr13	94001770	94002265	(20362063)	C	MER67D	LTR/ERV1	(4)	510	22	1097680
1305	27.4	5.6	7.4	chr13	94129260	94129787	(20234541)	+	LTR33A	LTR/ERVL	1	518	(2)	1097844
19	11.7	0.0	0.0	chr13	94416415	94416442	(19947886)	+	(A)n	Simple_repeat	1	28	(0)	1098260
26	28.1	2.5	4.1	chr13	94707890	94708008	(19656320)	+	A-rich	Low_complexity	1	122	(0)	1098773
63	0.0	0.0	0.0	chr13	95516969	95517024	(18847304)	+	(TCCT)n	Simple_repeat	1	56	(0)	1100268
42	30.5	3.4	3.3	chr13	95517031	95517236	(18847092)	+	(CTTT)n	Simple_repeat	1	213	(0)	1100269
228	25.0	10.0	4.0	chr13	95517249	95517323	(18847005)	C	L2c	LINE/L2	(18)	3369	3290	1100270
1406	28.6	12.3	1.2	chr13	95897828	95898544	(18465784)	+	L2a	LINE/L2	2333	3137	(289)	1100837
30	32.2	5.5	0.0	chr13	96273884	96273905	(18090423)	+	(CTCT)n	Simple_repeat	1	153	(0)	1101377
59	18.5	2.4	0.0	chr13	96273906	96274028	(18090300)	+	(TCCC)n	Simple_repeat	1	126	(0)	1101378
624	16.7	0.0	1.9	chr13	96274030	96274137	(18090191)	C	AluJb	SINE/Alu	(0)	312	207	1101379
695	25.1	3.3	2.8	chr13	96285687	96285931	(18078397)	C	MLT1K	LTR/ERVL-MaLR	(15)	580	292	1101399
23	29.4	2.5	4.9	chr13	96285942	96286061	(18078267)	+	(CTTT)n	Simple_repeat	1	123	(0)	1101400
331	22.5	12.2	4.4	chr13	96286074	96286208	(18078120)	C	MLT1K	LTR/ERVL-MaLR	(165)	430	284	1101399
39	32.7	0.8	0.0	chr13	96310575	96310707	(18053621)	+	(CTCT)n	Simple_repeat	1	134	(0)	1101434
319	30.5	3.6	1.9	chr13	97132592	97132784	(17231544)	+	MIRb	SINE/MIR	45	246	(22)	1102564
2819	0.3	0.0	0.7	chr13	97583143	97583457	(16780871)	C	AluYa5	SINE/Alu	(0)	311	1	1103220
3080	15.8	4.7	0.0	chr13	97583689	97584221	(16780107)	C	MER89	LTR/ERV1	(0)	559	1	1103221
1484	16.0	19.7	3.4	chr13	97913793	97914179	(16450149)	+	MER31B	LTR/ERV1	1	466	(0)	1103688
2191	24.3	5.4	6.2	chr13	97914365	97914925	(16449403)	+	MLT1F2	LTR/ERVL-MaLR	5	560	(0)	1103689
3066	13.8	4.2	6.4	chr13	99073010	99073307	(15291021)	+	LTR35	LTR/ERV1	198	490	(118)	1105642
63	2.2	9.6	0.0	chr13	99073308	99073401	(15290927)	+	(TC)n	Simple_repeat	1	103	(0)	1105644
3066	13.8	4.2	6.4	chr13	99073402	99073510	(15290818)	+	LTR35	LTR/ERV1	491	608	(0)	1105642
6280	11.5	2.4	0.8	chr13	99073512	99074444	(15289884)	C	Tigger2	DNA/TcMar-Tigger	(1265)	1453	506	1105639
1421	16.1	12.6	0.0	chr13	99107531	99107773	(15256555)	+	AluJo	SINE/Alu	1	278	(34)	1105707
142	24.3	2.1	2.0	chr13	99107776	99108163	(15256165)	+	GA-rich	Low_complexity	1	396	(0)	1105708
3593	15.4	5.8	9.3	chr13	99108164	99108343	(15255985)	+	L1MD	LINE/L1	2762	2962	(3184)	1105709
1693	13.7	7.3	0.4	chr13	100058681	100058958	(14305370)	+	AluSq	SINE/Alu	2	300	(13)	1107313
27	35.3	0.9	1.8	chr13	100058959	100059070	(14305258)	+	GA-rich	Low_complexity	1	113	(0)	1107314
721	15.1	0.0	1.6	chr13	100059075	100059195	(14305133)	C	MER74B	LTR/ERVL	(442)	180	62	1107310
835	18.9	7.8	0.7	chr13	100059200	100059353	(14304975)	+	MER21B	LTR/ERVL	331	496	(372)	1107315
2156	9.2	4.1	0.0	chr13	100059396	100059678	(14304650)	+	AluSq2	SINE/Alu	1	295	(18)	1107316
286	23.9	14.2	0.0	chr13	100451542	100451650	(13912678)	+	L2a	LINE/L2	2400	2526	(893)	1107996
266	14.7	8.0	0.0	chr13	100451669	100452272	(13912056)	+	(CT)n	Simple_repeat	1	652	(0)	1107997
997	30.5	2.8	2.8	chr13	100452422	100452856	(13911472)	+	L2a	LINE/L2	2990	3424	(2)	1107996
1981	11.6	9.4	1.1	chr13	100719596	100719771	(13644557)	+	THE1D	LTR/ERVL-MaLR	1	206	(175)	1108388
44	2.4	0.0	0.0	chr13	100719772	100719813	(13644515)	+	(TC)n	Simple_repeat	1	42	(0)	1108389
1981	11.6	9.4	1.1	chr13	100719814	100719985	(13644343)	+	THE1D	LTR/ERVL-MaLR	207	380	(1)	1108388
339	24.3	11.1	1.1	chr13	100806672	100806790	(13557538)	+	MIRc	SINE/MIR	45	175	(93)	1108538
1893	19.0	0.0	0.3	chr13	100806861	100807170	(13557158)	C	AluJb	SINE/Alu	(3)	309	1	1108539
258	22.9	1.6	0.0	chr13	100807196	100807256	(13557072)	+	MIR	SINE/MIR	200	261	(1)	1108538
2252	16.4	7.6	4.6	chr13	103429669	103430165	(10934163)	C	MER67D	LTR/ERV1	(0)	514	2	1112158
74	7.1	5.0	0.0	chr13	105176322	105176441	(9187887)	+	(CT)n	Simple_repeat	1	126	(0)	1114385
199	24.5	9.3	0.0	chr13	106714690	106714738	(7649590)	+	MIR3	SINE/MIR	95	148	(60)	1116444
58	1.8	0.0	0.0	chr13	106714746	106714801	(7649527)	+	(TGC)n	Simple_repeat	1	56	(0)	1116445
192	29.8	1.7	0.0	chr13	106714938	106714994	(7649334)	+	MIR3	SINE/MIR	151	208	(0)	1116444
15	0.0	0.0	0.0	chr13	107866168	107866186	(6498142)	+	(GCC)n	Simple_repeat	1	19	(0)	1118019
14	24.1	0.0	0.0	chr13	107866193	107866231	(6498097)	+	G-rich	Low_complexity	1	39	(0)	1118020
63	6.3	1.2	1.1	chr13	107866300	107866385	(6497943)	+	(CTG)n	Simple_repeat	1	87	(0)	1118021
45	9.4	5.4	0.0	chr13	107866711	107866802	(6497526)	+	(TC)n	Simple_repeat	1	97	(0)	1118022
20	7.0	3.3	0.0	chr13	107866900	107866929	(6497399)	+	(GA)n	Simple_repeat	1	31	(0)	1118023
12	13.3	2.7	5.3	chr13	107866955	107866991	(6497337)	+	G-rich	Low_complexity	1	38	(0)	1118024
50	33.7	5.5	0.4	chr13	112136560	112136813	(2227515)	+	(CTCT)n	Simple_repeat	1	268	(0)	1123212
346	33.8	13.7	3.1	chr13	112136869	112137283	(2227045)	+	L3	LINE/CR1	3624	4089	(10)	1123213
286	21.9	2.0	2.9	chr13	112195639	112196388	(2167940)	+	(CCTT)n	Simple_repeat	1	765	(0)	1123264
596	8.8	0.9	1.8	chr13	112196394	112197355	(2166973)	+	(CCCTGGTT)n	Simple_repeat	1	971	(0)	1123265
1196	16.7	1.7	3.0	chr13	112341310	112341468	(2022860)	C	MER44A	DNA/TcMar-Tigger	(81)	258	102	1123382
135	16.8	0.0	0.0	chr13	112341477	112341705	(2022623)	+	(CT)n	Simple_repeat	1	229	(0)	1123384
307	24.4	10.9	0.0	chr13	113557483	113557572	(806756)	+	Charlie4z	DNA/hAT-Charlie	62	162	(5)	1124854
379	22.1	1.9	3.7	chr13	113557690	113557797	(806531)	+	MER54B	LTR/ERVL	221	326	(467)	1124855
1863	20.9	3.0	10.9	chr13	113557924	113558466	(805862)	+	MER54B	LTR/ERVL	295	793	(0)	1124855
15	26.3	5.5	3.1	chr13	113584448	113584538	(779790)	+	(CGCACG)n	Simple_repeat	1	96	(0)	1124892
16	21.4	2.3	0.0	chr13	113584581	113584623	(779705)	+	GA-rich	Low_complexity	1	44	(0)	1124893
1408	29.3	13.0	7.1	chr14	20006845	20008074	(87035644)	+	L1MDa	LINE/L1	2	1403	(5230)	1127421
189	8.4	0.0	0.0	chr14	20008076	20008333	(87035385)	+	(GAGG)n	Simple_repeat	1	258	(0)	1127422
122	23.5	1.7	1.0	chr14	20008334	20008371	(87035347)	+	GA-rich	Low_complexity	1	301	(0)	1127423
3181	20.3	6.5	4.8	chr14	20008376	20009471	(87034247)	+	L1MDa	LINE/L1	2046	3125	(3412)	1127421
4144	15.1	2.6	4.2	chr14	21177999	21178556	(85865162)	C	L1MB8	LINE/L1	(655)	5523	4964	1129222
691	28.2	10.8	8.5	chr14	21178565	21178784	(85864934)	C	L1M4b	LINE/L1	(6543)	324	93	1129216
1422	31.0	14.7	2.4	chr14	21686010	21686909	(85356809)	+	L2a	LINE/L2	2128	3160	(266)	1130243
1672	16.3	12.9	10.6	chr14	22602789	22603242	(84440476)	C	MER31B	LTR/ERV1	(0)	466	1	1131394
14	0.0	0.0	0.0	chr14	22872318	22872335	(84171383)	+	(CCT)n	Simple_repeat	1	18	(0)	1131878
17	8.8	0.0	9.1	chr14	22872439	22872482	(84171236)	+	(CCCCAG)n	Simple_repeat	1	44	(0)	1131879
3361	21.6	7.9	6.2	chr14	23457679	23458309	(83585409)	+	MER21C	LTR/ERVL	291	923	(15)	1132875
695	16.5	6.1	3.4	chr14	23458317	23458492	(83585226)	+	L1MB8	LINE/L1	2398	2578	(4173)	1132871
3728	16.3	7.3	4.8	chr14	23458496	23458971	(83584747)	+	Charlie5	DNA/hAT-Charlie	616	1095	(1529)	1132878
17	13.0	7.4	3.5	chr14	23551167	23551180	(83492538)	+	(CCGTC)n	Simple_repeat	1	32	(26)	1133020
13	18.2	0.0	0.0	chr14	23551181	23551211	(83492507)	+	(CCCCTC)n	Simple_repeat	1	31	(0)	1133021
17	13.0	7.4	3.5	chr14	23551212	23551220	(83492498)	+	(CCGTC)n	Simple_repeat	33	58	(0)	1133020
12	13.9	6.2	0.0	chr14	23551460	23551491	(83492227)	+	(CCCT)n	Simple_repeat	1	34	(0)	1133022
49	3.0	2.7	4.0	chr14	23551653	23551726	(83491992)	+	(CCT)n	Simple_repeat	1	76	(0)	1133023
194	31.0	7.5	2.2	chr14	24297112	24297200	(82746518)	C	L2b	LINE/L2	(10)	3365	3272	1134044
356	30.3	10.2	5.5	chr14	24297490	24298022	(82745696)	+	L2b	LINE/L2	2687	3276	(111)	1134045
440	27.5	12.8	5.8	chr14	25232043	25232527	(81811191)	C	L1ME4b	LINE/L1	(264)	628	132	1135286
37	16.6	0.0	0.0	chr14	25232528	25232596	(81811122)	+	(CTCC)n	Simple_repeat	1	69	(0)	1135287
42	0.0	0.0	0.0	chr14	25232599	25232634	(81811084)	+	(TG)n	Simple_repeat	1	36	(0)	1135288
28	8.1	0.0	0.0	chr14	26597490	26597529	(80446189)	+	(T)n	Simple_repeat	1	40	(0)	1137001
16	35.7	2.5	3.2	chr14	26597952	26597985	(80445733)	+	(CGC)n	Simple_repeat	1	124	(0)	1137002
26	23.9	2.3	2.2	chr14	26597986	26598072	(80445646)	+	(CGCTGC)n	Simple_repeat	1	89	(0)	1137003
1296	29.6	11.1	1.0	chr14	28674409	28674926	(78368792)	C	LTR80A	LTR/ERVL	(0)	583	7	1139540
21	0.0	3.1	3.0	chr14	28766883	28766914	(78276804)	+	(GCT)n	Simple_repeat	1	33	(0)	1139688
19	24.7	0.0	1.8	chr14	28766917	28766942	(78276776)	+	GA-rich	Low_complexity	1	53	(0)	1139689
18	12.0	0.0	0.0	chr14	28766943	28766969	(78276749)	+	(G)n	Simple_repeat	1	27	(0)	1139690
29	10.1	0.0	0.0	chr14	29266053	29266095	(77777623)	+	(CA)n	Simple_repeat	1	43	(0)	1140276
47	13.7	5.2	3.3	chr14	29763389	29763504	(77280214)	+	G-rich	Low_complexity	1	122	(0)	1140956
3471	21.9	8.9	5.5	chr14	30826519	30826858	(76216860)	+	L1MC4	LINE/L1	1320	1714	(4501)	1142380
794	19.6	2.8	12.6	chr14	30826859	30827097	(76216621)	+	MER58C	DNA/hAT-Charlie	1	215	(0)	1142384
3471	21.9	8.9	5.5	chr14	30827098	30827655	(76216063)	+	L1MC4	LINE/L1	1715	2282	(3933)	1142380
2234	12.1	0.3	0.0	chr14	31414832	31415136	(75628582)	C	AluSg	SINE/Alu	(3)	307	2	1143595
704	26.0	6.6	1.2	chr14	31415362	31415606	(75628112)	C	MER46C	DNA/TcMar-Tigger	(79)	259	1	1143596
104	14.7	3.7	6.5	chr14	31605787	31606084	(75437634)	+	(TCC)n	Simple_repeat	1	309	(0)	1143961
2122	13.1	1.9	0.0	chr14	31606086	31606391	(75437327)	C	AluJr	SINE/Alu	(0)	312	1	1143962
28	34.1	0.0	1.0	chr14	32454890	32454989	(74588729)	+	(TCTT)n	Simple_repeat	1	100	(0)	1145174
1569	15.1	5.4	6.1	chr14	32454990	32455267	(74588451)	C	AluJr	SINE/Alu	(36)	276	1	1145175
276	29.4	12.6	4.2	chr14	32951080	32951246	(74092472)	+	MIR3	SINE/MIR	25	207	(1)	1145792
431	31.0	7.5	7.5	chr14	33184306	33184853	(73858865)	C	L2	LINE/L2	(417)	3002	2455	1146087
13	15.9	0.0	0.0	chr14	34874153	34874180	(72169538)	+	G-rich	Low_complexity	1	28	(0)	1148821
12	28.7	0.0	2.1	chr14	34874607	34874654	(72169064)	+	(CCCG)n	Simple_repeat	1	48	(0)	1148822
2163	10.9	0.0	0.0	chr14	35172053	35172328	(71871390)	C	AluSx1	SINE/Alu	(16)	296	21	1149492
3088	23.1	4.0	10.2	chr14	35172329	35172409	(71871309)	C	L1MEf	LINE/L1	(5400)	842	760	1149487
47	0.0	0.0	0.0	chr14	35172414	35172456	(71871262)	+	(TTCC)n	Simple_repeat	1	43	(0)	1149493
20	17.9	3.7	1.8	chr14	35172457	35172490	(71871228)	+	(TTCCT)n	Simple_repeat	1	36	(0)	1149494
43	0.0	0.0	0.0	chr14	35172491	35172530	(71871188)	+	(CCTCTCTC)n	Simple_repeat	1	40	(0)	1149495
20	17.9	3.7	1.8	chr14	35172531	35172549	(71871169)	+	(TTCCT)n	Simple_repeat	2	20	(0)	1149496
2112	11.1	1.3	5.7	chr14	35172551	35172865	(71870853)	C	AluSc	SINE/Alu	(8)	301	1	1149497
2172	13.6	0.0	0.0	chr14	35172873	35173167	(71870551)	C	AluSz	SINE/Alu	(17)	295	1	1149498
656	25.3	5.7	16.1	chr14	36091187	36091540	(70952178)	C	MLT1J	LTR/ERVL-MaLR	(174)	338	3	1151143
13	25.5	0.0	0.0	chr14	36091691	36091725	(70951993)	+	(TCTA)n	Simple_repeat	1	35	(0)	1151144
29	12.2	0.0	3.5	chr14	36662126	36662182	(70381536)	+	G-rich	Low_complexity	1	57	(0)	1151894
76	9.7	8.7	1.6	chr14	39454782	39454953	(67588765)	+	GA-rich	Low_complexity	1	187	(0)	1155758
65	9.0	1.0	0.0	chr14	40229519	40229615	(66814103)	+	(TCTC)n	Simple_repeat	1	98	(0)	1156650
489	34.8	5.5	5.5	chr14	40229621	40229912	(66813806)	C	MLT1O	LTR/ERVL-MaLR	(151)	391	100	1156651
2199	16.2	4.4	5.6	chr14	44783332	44783795	(62259923)	C	MER31B	LTR/ERV1	(0)	466	9	1162172
215	20.4	4.8	3.7	chr14	45330854	45331512	(61712206)	+	(CCTT)n	Simple_repeat	1	665	(0)	1163052
26	0.0	9.1	2.1	chr14	45331526	45331569	(61712149)	+	(CTTCT)n	Simple_repeat	1	48	(0)	1163053
1917	15.2	0.0	0.0	chr14	45331570	45331833	(61711885)	C	AluSz	SINE/Alu	(48)	264	1	1163054
911	33.3	10.2	4.6	chr14	46273772	46273916	(60769802)	C	L2a	LINE/L2	(2)	3424	3260	1164085
36	5.2	0.0	0.0	chr14	46273917	46273956	(60769762)	+	(GT)n	Simple_repeat	1	40	(0)	1164086
1025	29.7	9.4	5.3	chr14	46273957	46274560	(60769158)	C	L2a	LINE/L2	(167)	3259	2609	1164085
891	22.3	5.6	1.0	chr14	46630233	46630436	(60413282)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	292	1164522
697	5.5	0.0	21.1	chr14	46630489	46630616	(60413102)	+	AluYk2	SINE/Alu	179	279	(32)	1164523
37	5.6	3.5	0.0	chr14	46630617	46630673	(60413045)	+	(GAGAGGA)n	Simple_repeat	1	59	(0)	1164524
350	26.1	9.4	10.2	chr14	46630679	46630883	(60412835)	C	MLT1D	LTR/ERVL-MaLR	(295)	210	8	1164522
474	30.6	5.2	5.9	chr14	46630908	46631161	(60412557)	+	L2a	LINE/L2	2711	2962	(457)	1164521
1851	14.7	2.9	0.7	chr14	48829759	48830031	(58213687)	+	AluSx	SINE/Alu	1	279	(33)	1167183
103	13.1	0.9	5.8	chr14	48830032	48830202	(58213516)	+	GA-rich	Low_complexity	1	161	(0)	1167184
70	0.0	0.0	0.0	chr14	48830203	48830264	(58213454)	+	(AGAA)n	Simple_repeat	1	62	(0)	1167185
36	38.1	2.2	3.0	chr14	49519842	49520071	(57523647)	+	A-rich	Low_complexity	1	235	(0)	1168062
316	29.8	2.6	0.9	chr14	49520118	49520232	(57523486)	C	MLT1N2	LTR/ERVL-MaLR	(7)	555	439	1168063
270	28.9	3.2	5.1	chr14	49520233	49520274	(57523444)	C	LTR67B	LTR/ERVL	(7)	613	460	1168064
1040	27.5	4.4	3.4	chr14	51428299	51428682	(55615036)	+	MLT1H1-int	LTR/ERVL-MaLR	1022	1409	(0)	1171454
608	26.3	9.7	0.4	chr14	51428686	51428879	(55614839)	+	MLT1H1	LTR/ERVL-MaLR	5	255	(294)	1171454
41	27.9	2.4	4.1	chr14	51428914	51429081	(55614637)	+	GA-rich	Low_complexity	1	172	(0)	1171455
1107	26.1	0.0	4.7	chr14	51429082	51429355	(55614363)	+	MLT1H1	LTR/ERVL-MaLR	294	554	(1)	1171454
219	12.8	0.0	4.9	chr14	51429360	51429400	(55614318)	C	MER5B	DNA/hAT-Charlie	(136)	42	4	1171456
2085	27.9	3.5	6.7	chr14	53250605	53250980	(53792738)	+	L2	LINE/L2	1818	2179	(1240)	1174299
44	2.3	0.0	0.0	chr14	53250981	53251025	(53792693)	+	(CCTC)n	Simple_repeat	1	45	(0)	1174300
2085	27.9	3.5	6.7	chr14	53251026	53251440	(53792278)	+	L2	LINE/L2	2180	2582	(837)	1174299
3523	18.6	9.8	2.1	chr14	53676978	53677609	(53366109)	C	L1MEc	LINE/L1	(5635)	765	34	1174865
10572	11.3	9.3	0.3	chr14	54458476	54459957	(52583761)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	1175961
21	6.5	0.0	2.9	chr14	54567028	54567061	(52476657)	+	(GGA)n	Simple_repeat	1	34	(0)	1176155
229	26.0	19.3	2.9	chr14	54773829	54773979	(52269739)	C	L2a	LINE/L2	(1)	3425	3220	1176431
229	32.8	7.1	1.5	chr14	54773990	54774122	(52269596)	+	MIR3	SINE/MIR	21	161	(47)	1176432
332	27.1	11.0	0.8	chr14	54774164	54774293	(52269425)	+	MIR	SINE/MIR	44	188	(74)	1176433
1479	15.5	0.5	0.5	chr14	55532646	55532858	(51510860)	+	AluJr	SINE/Alu	64	276	(36)	1177880
186	32.1	11.7	3.1	chr14	56120609	56120865	(50922853)	C	L2a	LINE/L2	(24)	3402	3121	1178824
1511	20.2	1.6	10.6	chr14	56905343	56905891	(50137827)	+	MER41B	LTR/ERV1	3	490	(144)	1179934
42	20.0	3.1	0.0	chr14	56930155	56930251	(50113467)	+	(TCTC)n	Simple_repeat	1	100	(0)	1179980
1891	16.1	0.0	1.9	chr14	56930252	56930562	(50113156)	C	AluJb	SINE/Alu	(2)	310	6	1179981
26	9.1	7.9	1.5	chr14	57090899	57090918	(49952800)	+	(CTTC)n	Simple_repeat	1	21	(0)	1180247
76	6.8	0.0	0.0	chr14	57090919	57091012	(49952706)	+	(TCCC)n	Simple_repeat	1	94	(0)	1180248
26	9.1	7.9	1.5	chr14	57091013	57091055	(49952663)	+	(CTTC)n	Simple_repeat	3	46	(0)	1180249
1515	16.4	4.7	1.4	chr14	59379525	59379727	(47663991)	+	MLT1D	LTR/ERVL-MaLR	5	203	(302)	1183638
72	1.5	0.0	0.0	chr14	59379728	59379796	(47663922)	+	(GGAGAGAA)n	Simple_repeat	1	69	(0)	1183639
1515	16.4	4.7	1.4	chr14	59379797	59379877	(47663841)	+	MLT1D	LTR/ERVL-MaLR	204	298	(207)	1183638
3833	27.2	7.3	6.6	chr14	59379906	59381640	(47662078)	C	L1MA3	LINE/L1	(510)	8951	7197	1183637
21	22.7	2.9	2.8	chr14	59870814	59870883	(47172835)	+	(CTC)n	Simple_repeat	1	72	(0)	1184293
13	24.6	3.5	3.4	chr14	59870849	59870905	(47172813)	+	(GCT)n	Simple_repeat	1	59	(0)	1184294
1655	28.6	8.8	5.5	chr14	61602386	61603208	(45440510)	+	L1MEg1	LINE/L1	3	783	(5452)	1186753
264	29.5	12.9	2.6	chr14	61891937	61892089	(45151629)	C	MLT1K	LTR/ERVL-MaLR	(25)	570	400	1187218
667	28.3	26.4	3.5	chr14	61892480	61892809	(45150909)	C	MLT1K	LTR/ERVL-MaLR	(171)	424	19	1187218
2300	10.5	0.0	0.0	chr14	64649127	64649421	(42394297)	+	AluSq2	SINE/Alu	1	295	(18)	1191664
1319	20.1	10.0	11.0	chr14	64649422	64649687	(42394031)	+	MLT1C	LTR/ERVL-MaLR	185	461	(6)	1191663
71	0.0	0.0	0.0	chr14	64704385	64704447	(42339271)	+	(CTCCCTCG)n	Simple_repeat	1	63	(0)	1191799
33	15.7	8.1	1.1	chr14	65237152	65237238	(41806480)	+	GA-rich	Low_complexity	1	94	(0)	1192710
1577	21.9	2.2	1.4	chr14	65237332	65237693	(41806025)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1192711
712	32.2	10.2	10.9	chr14	65242818	65243843	(41799875)	C	L2c	LINE/L2	(0)	3387	2291	1192726
421	28.1	5.0	0.0	chr14	65243844	65243957	(41799761)	+	L2a	LINE/L2	3307	3426	(0)	1192727
712	32.2	10.2	10.9	chr14	65243958	65244602	(41799116)	C	L2c	LINE/L2	(0)	2290	1600	1192726
13	28.0	0.0	6.8	chr14	65412838	65412910	(41630808)	+	(CCCTC)n	Simple_repeat	1	73	(0)	1193135
36	16.9	0.0	0.0	chr14	65530798	65530865	(41512853)	+	(TCTC)n	Simple_repeat	1	68	(0)	1193331
186	25.2	9.8	5.1	chr14	65867905	65868021	(41175697)	C	L2a	LINE/L2	(332)	3043	2921	1193810
233	23.3	9.9	2.7	chr14	65868033	65868107	(41175611)	C	MER91C	DNA/hAT-Tip100	(11)	129	49	1193812
369	30.9	7.9	12.3	chr14	65868112	65868510	(41175208)	C	L2a	LINE/L2	(493)	2926	2547	1193810
990	17.2	12.2	2.0	chr14	66004129	66004370	(41039348)	+	MSTB	LTR/ERVL-MaLR	1	268	(160)	1194022
851	16.2	1.8	1.2	chr14	66004396	66004557	(41039161)	+	MSTB	LTR/ERVL-MaLR	200	362	(66)	1194022
2951	19.9	7.5	2.1	chr14	66004561	66004773	(41038945)	C	L1ME2	LINE/L1	(146)	6191	5958	1194023
19716	12.9	3.6	3.1	chr14	66795695	66801580	(40242138)	C	L1MA2	LINE/L1	(0)	7723	1752	1195065
31	3.3	0.0	0.0	chr14	66801581	66801611	(40242107)	+	(CT)n	Simple_repeat	1	31	(0)	1195066
17829	16.8	4.5	6.8	chr14	66801612	66801795	(40241923)	C	L1MA2	LINE/L1	(5814)	1751	1608	1195065
30	5.6	0.0	0.0	chr14	66801796	66801832	(40241886)	+	(CTCCCT)n	Simple_repeat	1	37	(0)	1195067
17829	16.8	4.5	6.8	chr14	66801833	66803522	(40240196)	C	L1MA2	LINE/L1	(5958)	1607	12	1195065
210	19.1	19.2	1.6	chr14	67414675	67414738	(39628980)	+	MamTip2	DNA/hAT-Tip100	117	194	(111)	1196005
386	32.7	7.0	2.3	chr14	69924395	69924610	(37119108)	+	L2a	LINE/L2	2736	2962	(457)	1200408
120	26.7	6.7	0.8	chr14	70822242	70822735	(36220983)	+	(CT)n	Simple_repeat	1	527	(0)	1201805
1762	16.7	1.8	0.0	chr14	70861785	70862053	(36181665)	+	AluSz6	SINE/Alu	1	274	(38)	1201888
53	15.3	1.6	4.8	chr14	70862058	70862181	(36181537)	+	GA-rich	Low_complexity	1	126	(0)	1201889
7296	15.2	6.0	5.8	chr14	70862183	70862458	(36181260)	C	MER57A-int	LTR/ERV1	(2127)	4060	3774	1201887
322	34.0	5.4	4.6	chr14	72757218	72757436	(34286282)	C	L3	LINE/CR1	(48)	4051	3831	1204762
2171	11.7	0.3	1.6	chr14	73122259	73122575	(33921143)	C	AluSq2	SINE/Alu	(0)	313	1	1205571
2282	10.2	0.0	1.6	chr14	75068008	75068312	(31975406)	+	AluSq	SINE/Alu	1	300	(13)	1209668
18	3.3	2.9	5.6	chr14	75068331	75068365	(31975353)	+	(AAAAC)n	Simple_repeat	1	36	(0)	1209669
60	15.9	4.1	0.0	chr14	75068468	75068588	(31975130)	+	GA-rich	Low_complexity	1	126	(0)	1209670
14	20.6	2.6	0.0	chr14	75981763	75981801	(31061917)	+	A-rich	Low_complexity	1	40	(0)	1211416
41	30.0	2.4	2.3	chr14	75981843	75982011	(31061707)	+	(TC)n	Simple_repeat	1	173	(0)	1211417
1100	18.8	2.5	2.1	chr14	76564319	76564557	(30479161)	+	L1MB5	LINE/L1	5933	6172	(2)	1212479
153	0.5	5.6	0.0	chr14	76564713	76564908	(30478810)	+	(AG)n	Simple_repeat	1	207	(0)	1212480
573	28.6	4.7	3.0	chr14	76755063	76755228	(30288490)	+	MIR3	SINE/MIR	18	186	(22)	1212890
368	24.0	7.8	2.3	chr14	76813106	76813237	(30230481)	+	MIR3	SINE/MIR	55	194	(14)	1212988
647	31.0	8.0	4.5	chr14	76813588	76814093	(30229625)	+	LTR38B	LTR/ERV1	1	583	(27)	1212989
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
90	16.3	0.6	2.8	chr14	79227705	79227885	(27815833)	+	(TTCC)n	Simple_repeat	1	182	(0)	1217447
45	15.8	0.0	2.2	chr14	79254787	79254818	(27788900)	+	(TCCC)n	Simple_repeat	1	32	(0)	1217488
33	0.0	0.0	2.8	chr14	79254819	79254854	(27788864)	+	(TTCCTTCT)n	Simple_repeat	1	36	(0)	1217489
45	15.8	0.0	2.2	chr14	79254855	79254910	(27788808)	+	(TCCC)n	Simple_repeat	1	55	(0)	1217490
11893	14.2	3.5	2.2	chr14	79844129	79845552	(27198166)	C	Tigger1	DNA/TcMar-Tigger	(631)	1787	343	1218405
1619	16.9	8.3	0.0	chr14	79845946	79846276	(27197442)	C	Tigger1	DNA/TcMar-Tigger	(2057)	361	1	1218407
450	14.3	33.0	0.0	chr14	81206552	81206677	(25837041)	+	MER5A	DNA/hAT-Charlie	1	188	(1)	1220269
247	19.6	3.8	0.0	chr14	81206694	81206744	(25836974)	+	MER112	DNA/hAT-Charlie	4	56	(205)	1220270
25	33.0	1.2	0.0	chr14	81206761	81206846	(25836872)	+	(CTCT)n	Simple_repeat	1	87	(0)	1220271
1669	23.0	10.3	2.5	chr14	84137637	84138082	(22905636)	+	MER67D	LTR/ERV1	1	485	(29)	1224402
287	30.2	5.0	3.6	chr14	84138146	84138341	(22905377)	+	HAL1ME	LINE/L1	1609	1807	(658)	1224403
5186	15.2	0.9	1.6	chr14	84682542	84683610	(22360108)	C	L1PA15	LINE/L1	(2)	6163	5104	1225120
77	17.8	0.0	0.0	chr14	84683614	84683752	(22359966)	+	(CTCT)n	Simple_repeat	1	139	(0)	1225121
2181	11.8	0.3	0.0	chr14	84683753	84684049	(22359669)	C	AluSq2	SINE/Alu	(15)	298	1	1225122
231	14.9	0.0	1.0	chr14	86943739	86944133	(20099585)	+	(TCCT)n	Simple_repeat	1	395	(0)	1228245
774	19.2	33.1	4.7	chr14	87292530	87292807	(19750911)	C	MER31B	LTR/ERV1	(36)	430	74	1228763
1532	13.4	0.5	0.0	chr14	87292810	87293033	(19750685)	+	AluSx3	SINE/Alu	87	311	(0)	1228764
96	32.5	2.1	0.6	chr14	89360257	89360596	(17683122)	+	GA-rich	Low_complexity	1	347	(0)	1231933
31	3.0	0.0	0.0	chr14	89360597	89360630	(17683088)	+	(GGAGGGAA)n	Simple_repeat	1	34	(0)	1231934
2686	26.9	7.5	8.4	chr14	89591916	89592903	(17450815)	+	HAL1	LINE/L1	909	1890	(617)	1232359
118	17.2	4.6	1.7	chr14	89592982	89593265	(17450453)	+	GA-rich	Low_complexity	1	297	(0)	1232362
974	9.3	0.8	1.5	chr14	89593361	89593491	(17450227)	+	AluSx	SINE/Alu	5	134	(178)	1232363
306	30.8	3.2	0.0	chr14	89955175	89955265	(17088453)	+	L2b	LINE/L2	3262	3355	(20)	1233009
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
15	21.9	0.0	6.7	chr14	90397289	90397295	(16646423)	+	(TTTTTTG)n	Simple_repeat	1	13	(47)	1233835
796	22.3	18.6	4.8	chr14	92741929	92742258	(14301460)	+	MER31B	LTR/ERV1	1	386	(80)	1238138
2153	12.0	3.5	0.0	chr14	92742287	92742586	(14301132)	C	AluSz6	SINE/Alu	(1)	311	1	1238139
563	24.3	0.0	3.5	chr14	92742602	92742742	(14300976)	+	FLAM_C	SINE/Alu	6	220	(82)	1238140
9834	11.2	0.1	2.5	chr14	93341801	93343172	(13700546)	C	THE1D-int	LTR/ERVL-MaLR	(291)	1340	1	1239333
2530	24.4	9.8	9.2	chr14	93516748	93517174	(13526544)	C	L1MEc	LINE/L1	(1543)	4776	4319	1239599
22	35.1	5.0	0.0	chr14	93517185	93517241	(13526477)	+	(CTCT)n	Simple_repeat	1	111	(15)	1239601
17	22.9	1.8	3.5	chr14	93517242	93517298	(13526420)	+	(TTTCTT)n	Simple_repeat	1	58	(0)	1239602
22	35.1	5.0	0.0	chr14	93517299	93517304	(13526414)	+	(CTCT)n	Simple_repeat	112	126	(0)	1239601
1151	22.0	6.7	2.1	chr14	93517305	93517634	(13526084)	C	L1MEc	LINE/L1	(1955)	4364	4019	1239599
38	15.9	6.0	4.0	chr14	94129319	94129435	(12914283)	+	GA-rich	Low_complexity	1	124	(0)	1240674
12	7.2	10.3	0.0	chr14	94129677	94129705	(12914013)	+	(CCCG)n	Simple_repeat	1	32	(0)	1240675
212	24.8	3.7	0.8	chr14	95374774	95375364	(11668354)	+	(CCTT)n	Simple_repeat	1	613	(0)	1242894
216	32.4	4.7	9.7	chr14	95375366	95375478	(11668240)	C	L2c	LINE/L2	(29)	3358	3250	1242895
374	15.7	2.5	1.7	chr14	96768472	96769225	(10274493)	+	(CCTT)n	Simple_repeat	1	773	(0)	1245486
1209	33.5	10.1	5.0	chr14	96807157	96807832	(10235886)	C	L3	LINE/CR1	(123)	3976	3263	1245572
44	0.0	0.0	0.0	chr14	96808018	96808055	(10235663)	+	(TG)n	Simple_repeat	1	38	(0)	1245573
217	34.9	3.8	2.3	chr14	96808065	96808193	(10235525)	C	L2	LINE/L2	(1158)	2261	2131	1245574
242	18.2	0.0	15.4	chr14	96808206	96808270	(10235448)	C	L2c	LINE/L2	(34)	3353	3299	1245575
1857	22.7	6.3	10.6	chr14	96808401	96808791	(10234927)	C	L1ME3A	LINE/L1	(8)	6165	5787	1245576
230	26.1	10.4	0.0	chr14	98013863	98013931	(9029787)	C	MIRc	SINE/MIR	(118)	150	74	1247636
54	12.7	0.0	0.0	chr14	98014018	98014104	(9029614)	+	(CTCC)n	Simple_repeat	1	87	(0)	1247637
90	3.9	6.0	0.7	chr14	98014105	98014238	(9029480)	+	(CTTT)n	Simple_repeat	1	142	(0)	1247638
44	26.8	0.8	0.8	chr14	98270051	98270172	(8773546)	+	(CTCT)n	Simple_repeat	1	123	(0)	1248086
223	25.7	1.8	0.3	chr14	98666861	98667420	(8376298)	+	(CCTT)n	Simple_repeat	1	570	(0)	1248748
750	20.1	3.5	0.0	chr14	99158029	99158192	(7885526)	+	MER3	DNA/hAT-Charlie	2	171	(38)	1249603
445	30.3	10.4	0.0	chr14	99158210	99158364	(7885354)	+	MLT1J2	LTR/ERVL-MaLR	259	431	(17)	1249602
678	19.8	9.9	1.1	chr14	99158391	99158564	(7885154)	C	MIR	SINE/MIR	(41)	221	31	1249604
465	35.7	4.5	2.1	chr14	102164181	102164463	(4879255)	+	L2c	LINE/L2	635	924	(2495)	1254387
190	28.0	10.9	4.7	chr14	102164513	102164598	(4879120)	+	L2c	LINE/L2	1944	2035	(1384)	1254387
247	18.6	0.0	4.8	chr14	102164608	102164669	(4879049)	+	L2-1_AMi	LINE/L2	131	189	(1046)	1254388
787	29.0	9.5	4.5	chr14	103409603	103410110	(3633608)	C	L1ME3G	LINE/L1	(297)	627	203	1256769
873	22.4	19.8	1.2	chr14	103410111	103410431	(3633287)	C	MSTD	LTR/ERVL-MaLR	(1)	395	1	1256770
787	28.8	9.2	5.1	chr14	103410432	103410538	(3633180)	C	L1ME3G	LINE/L1	(722)	202	97	1256769
2238	11.1	0.3	0.3	chr14	103839346	103839643	(3204075)	+	AluSp	SINE/Alu	2	299	(14)	1257617
648	20.6	1.8	4.6	chr14	103839660	103839832	(3203886)	+	L2	LINE/L2	2886	3053	(366)	1257609
2297	11.0	0.0	0.3	chr14	104621496	104621805	(2421913)	+	AluSc	SINE/Alu	1	309	(0)	1258604
120	27.8	0.8	3.1	chr14	104621806	104621960	(2421758)	+	GA-rich	Low_complexity	226	374	(0)	1258605
473	34.3	6.5	2.3	chr14	104622030	104622339	(2421379)	+	LTR40A1	LTR/ERVL	166	489	(95)	1258601
61	19.4	0.0	4.1	chr14	105521498	105521539	(1522179)	+	(CCTC)n	Simple_repeat	1	41	(0)	1259790
71	0.0	0.0	0.0	chr14	105521540	105521602	(1522116)	+	(TCTT)n	Simple_repeat	1	63	(0)	1259791
61	19.4	0.0	4.1	chr14	105521603	105521705	(1522013)	+	(CCTC)n	Simple_repeat	2	100	(0)	1259792
2042	9.9	0.4	1.1	chr14	105521709	105521981	(1521737)	C	AluSz	SINE/Alu	(39)	273	3	1259793
1442	30.9	6.8	5.3	chr14	106340193	106340499	(703219)	+	MER89-int	LTR/ERV1	5170	5461	(1340)	1260576
914	29.7	3.6	2.9	chr14	106340523	106340907	(702811)	+	LTR52	LTR/ERVL	17	404	(17)	1260579
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
2461	18.4	2.5	1.7	chr15	25048621	25048808	(76942381)	C	L1M3	LINE/L1	(688)	5483	5301	1269698
124	20.5	0.0	0.4	chr15	25048824	25049069	(76942120)	+	(TCCC)n	Simple_repeat	1	246	(0)	1269700
122	22.4	0.0	1.4	chr15	25049070	25049097	(76942092)	+	(TTCC)n	Simple_repeat	2	275	(0)	1269701
1134	23.1	3.0	4.1	chr15	25049100	25049367	(76941822)	C	AluJb	SINE/Alu	(43)	269	5	1269702
14	8.2	0.0	3.6	chr15	29056498	29056525	(72934664)	+	(TTGTT)n	Simple_repeat	1	28	(0)	1274932
32	16.6	5.1	0.0	chr15	29056526	29056560	(72934629)	+	(TCTC)n	Simple_repeat	1	39	(0)	1274933
66	5.5	0.0	0.0	chr15	29056561	29056637	(72934552)	+	(CCTC)n	Simple_repeat	1	77	(0)	1274934
32	16.6	5.1	0.0	chr15	29056638	29056679	(72934510)	+	(TCTC)n	Simple_repeat	4	45	(0)	1274935
284	23.8	1.2	0.0	chr15	29925739	29925818	(72065371)	C	L1MB8	LINE/L1	(2)	6176	6096	1276250
2246	13.0	0.7	0.7	chr15	29926331	29926630	(72064559)	+	AluSq2	SINE/Alu	2	301	(12)	1276251
67	27.0	0.5	2.6	chr15	30000294	30000484	(71990705)	+	A-rich	Low_complexity	1	192	(0)	1276365
2644	13.2	5.7	1.0	chr15	30000488	30000892	(71990297)	+	MSTB	LTR/ERVL-MaLR	2	426	(0)	1276366
3812	20.4	1.0	6.8	chr15	31259314	31259513	(70731676)	+	L1MB8	LINE/L1	5942	6133	(45)	1278372
43	26.5	0.7	3.7	chr15	31259529	31259684	(70731505)	+	GA-rich	Low_complexity	1	151	(0)	1278374
456	31.8	9.9	1.2	chr15	31259685	31259932	(70731257)	+	L1MC4	LINE/L1	958	1229	(4986)	1278375
13	22.1	2.7	0.0	chr15	34367155	34367191	(67623998)	+	(GCA)n	Simple_repeat	1	38	(0)	1282751
904	15.4	0.0	3.6	chr15	34371587	34371754	(67619435)	+	MLT1A0	LTR/ERVL-MaLR	1	162	(212)	1282760
44	15.3	0.0	0.0	chr15	34371755	34371830	(67619359)	+	GA-rich	Low_complexity	1	76	(0)	1282761
1083	16.6	1.1	0.5	chr15	34371862	34372049	(67619140)	+	MLT1A0	LTR/ERVL-MaLR	177	365	(0)	1282760
988	9.6	0.8	2.2	chr15	36686598	36686732	(65304457)	+	AluJb	SINE/Alu	1	133	(179)	1286002
47	28.0	2.1	0.0	chr15	36686733	36686752	(65304437)	+	GA-rich	Low_complexity	1	20	(0)	1286003
30	5.1	2.4	0.0	chr15	36686753	36686793	(65304396)	+	(GAGGGACA)n	Simple_repeat	1	42	(0)	1286004
64	26.9	0.4	6.3	chr15	36686794	36687057	(65304132)	+	GA-rich	Low_complexity	6	253	(0)	1286005
627	23.9	6.3	2.3	chr15	36687093	36687365	(65303824)	+	L1MEd	LINE/L1	1952	2291	(3855)	1285997
25	12.9	2.3	0.0	chr15	36770075	36770130	(65221059)	+	(TC)n	Simple_repeat	1	57	(0)	1286100
23	34.2	2.8	0.9	chr15	36770283	36770389	(65220800)	+	G-rich	Low_complexity	1	110	(0)	1286101
21	12.2	0.0	0.0	chr15	36770425	36770465	(65220724)	+	(ATT)n	Simple_repeat	1	41	(0)	1286102
24	9.6	5.3	2.0	chr15	36877891	36877944	(65113245)	+	GA-rich	Low_complexity	1	55	(0)	1286244
23	2.9	8.6	0.0	chr15	36877986	36878020	(65113169)	+	(GA)n	Simple_repeat	1	38	(0)	1286245
22	7.4	0.0	0.0	chr15	37111110	37111138	(64880051)	+	(GT)n	Simple_repeat	1	29	(0)	1286531
66	3.0	1.4	0.0	chr15	37111300	37111368	(64879821)	+	(TC)n	Simple_repeat	1	70	(0)	1286532
1612	15.3	3.7	13.4	chr15	37161370	37161793	(64829396)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1286598
12	27.9	0.0	3.9	chr15	37161818	37161868	(64829321)	+	A-rich	Low_complexity	1	51	(0)	1286599
2029	11.4	5.3	0.3	chr15	37161963	37162251	(64828938)	C	AluSq	SINE/Alu	(8)	305	2	1286600
860	24.6	0.5	0.0	chr15	37481792	37481986	(64509203)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	195	1286958
60	15.4	5.6	0.0	chr15	37481999	37482123	(64509066)	+	GA-rich	Low_complexity	1	132	(0)	1286959
760	20.5	6.0	1.7	chr15	37482124	37482297	(64508892)	C	MLT1B	LTR/ERVL-MaLR	(208)	182	1	1286958
544	14.9	6.2	10.4	chr15	38425266	38425400	(63565789)	+	MLT1D	LTR/ERVL-MaLR	107	235	(270)	1288305
1117	19.1	2.2	1.4	chr15	38425441	38425711	(63565478)	+	MLT1D	LTR/ERVL-MaLR	182	575	(49)	1288306
109	18.5	4.8	1.4	chr15	41031386	41031656	(60959533)	+	GA-rich	Low_complexity	1	284	(0)	1292361
59	28.4	2.6	0.5	chr15	41689249	41689437	(60301752)	+	(CTCT)n	Simple_repeat	1	194	(0)	1293920
13	13.2	0.0	0.0	chr15	41689492	41689516	(60301673)	+	(TATT)n	Simple_repeat	1	25	(0)	1293921
2025	12.6	0.0	0.0	chr15	41689554	41689823	(60301366)	C	AluSz6	SINE/Alu	(0)	312	43	1293922
1401	15.3	1.4	12.1	chr15	42128427	42128740	(59862449)	+	AluJb	SINE/Alu	1	280	(32)	1294605
52	18.7	1.7	1.7	chr15	42128741	42128857	(59862332)	+	GA-rich	Low_complexity	1	119	(0)	1294606
3086	15.0	1.8	5.1	chr15	42128875	42129526	(59861663)	C	L1M3	LINE/L1	(743)	5397	4768	1294607
295	35.9	5.4	4.0	chr15	43204206	43204608	(58786581)	+	L2c	LINE/L2	2107	2515	(904)	1296566
553	32.0	8.1	3.3	chr15	44011518	44011879	(57979310)	C	L2a	LINE/L2	(1002)	2417	2037	1298031
152	6.7	0.0	0.5	chr15	44288396	44288599	(57702590)	+	(GAGA)n	Simple_repeat	1	204	(0)	1298571
17082	15.1	2.0	5.9	chr15	44349277	44351294	(57639895)	+	L1MA3	LINE/L1	3686	5578	(1984)	1298718
146	22.5	0.5	3.5	chr15	45713021	45713392	(56277797)	+	(CCTC)n	Simple_repeat	1	374	(0)	1301246
1905	23.6	3.0	3.9	chr15	46171226	46171860	(55819329)	C	MER67B	LTR/ERV1	(0)	543	1	1301849
20	8.6	5.4	0.0	chr15	47717493	47717529	(54273660)	+	(TGC)n	Simple_repeat	1	39	(0)	1303776
17	13.1	0.0	0.0	chr15	47717647	47717672	(54273517)	+	(T)n	Simple_repeat	1	26	(0)	1303777
33	0.0	0.0	0.0	chr15	47717768	47717795	(54273394)	+	(TG)n	Simple_repeat	1	28	(0)	1303778
33	39.9	2.5	1.4	chr15	49656758	49656959	(52334230)	+	A-rich	Low_complexity	1	207	(0)	1306527
1704	16.5	1.4	2.4	chr15	50351299	50351589	(51639600)	+	AluJb	SINE/Alu	5	292	(20)	1307567
41	14.3	1.2	2.4	chr15	50351609	50351691	(51639498)	+	G-rich	Low_complexity	1	84	(0)	1307568
45	22.4	4.7	5.0	chr15	51397275	51397464	(50593725)	+	(CTCCCT)n	Simple_repeat	1	199	(0)	1309502
430	27.9	2.0	18.9	chr15	54497422	54497664	(47493525)	+	L1MEg	LINE/L1	1357	1557	(5776)	1314233
465	25.6	0.8	5.3	chr15	54497667	54497798	(47493391)	C	L1ME3A	LINE/L1	(148)	6025	5900	1314234
188	31.9	10.1	6.2	chr15	55687925	55688248	(46302941)	+	L2	LINE/L2	1647	1984	(1435)	1315997
372	29.9	16.7	5.1	chr15	55688253	55688554	(46302635)	+	L2	LINE/L2	2125	2435	(984)	1315997
413	17.7	1.2	0.2	chr15	56249136	56249233	(45741956)	+	MamGypLTR1a	LTR/Gypsy	1	98	(684)	1316894
218	24.6	5.8	4.4	chr15	56249273	56249340	(45741849)	+	MER91C	DNA/hAT-Tip100	40	108	(32)	1316895
26	18.9	3.7	0.0	chr15	56249441	56249497	(45741692)	+	GA-rich	Low_complexity	1	59	(0)	1316896
2051	9.2	0.0	2.2	chr15	56249498	56249768	(45741421)	+	AluSg7	SINE/Alu	41	305	(4)	1316897
19242	9.9	3.7	2.7	chr15	56376241	56378783	(45612406)	C	L1M1	LINE/L1	(630)	7093	4479	1317040
1511	19.0	1.3	7.2	chr15	56884645	56884842	(45106347)	+	AluJr	SINE/Alu	119	302	(10)	1317803
25	15.7	3.2	3.1	chr15	56884846	56884908	(45106281)	+	G-rich	Low_complexity	1	65	(0)	1317805
294	31.6	15.8	0.0	chr15	56885065	56885219	(45105970)	+	MLT1L	LTR/ERVL-MaLR	91	274	(336)	1317806
30	20.4	0.0	0.0	chr15	56885233	56885296	(45105893)	+	GA-rich	Low_complexity	1	64	(0)	1317807
576	31.1	3.6	2.8	chr15	56885364	56885581	(45105608)	+	MLT1L	LTR/ERVL-MaLR	367	586	(24)	1317806
80	3.2	0.0	3.9	chr15	57087008	57087110	(44904079)	+	(TCTCCCTCTG)n	Simple_repeat	1	103	(0)	1318137
1856	14.2	0.7	0.0	chr15	57087161	57087427	(44903762)	+	AluJo	SINE/Alu	30	298	(14)	1318138
476	30.1	8.7	9.5	chr15	57278131	57278537	(44712652)	+	HAL1	LINE/L1	1686	2097	(410)	1318414
799	9.6	0.0	0.0	chr15	57278571	57278674	(44712515)	C	U13	snRNA	(4)	104	1	1318420
62	15.5	2.3	2.2	chr15	57278683	57278813	(44712376)	+	(CCTC)n	Simple_repeat	1	134	(0)	1318421
65	18.5	4.0	2.7	chr15	57278803	57278979	(44712210)	+	(CTTT)n	Simple_repeat	1	184	(0)	1318422
1404	21.1	0.4	0.0	chr15	57278983	57279228	(44711961)	C	AluJb	SINE/Alu	(0)	312	66	1318423
71	11.1	2.2	3.5	chr15	59282862	59283000	(42708189)	+	G-rich	Low_complexity	1	142	(0)	1321762
87	4.1	1.0	1.0	chr15	59610198	59610300	(42380889)	+	(CCTT)n	Simple_repeat	1	104	(0)	1322449
16	10.0	2.9	2.8	chr15	59610357	59610391	(42380798)	+	(TTTCTT)n	Simple_repeat	1	36	(0)	1322450
256	25.1	5.1	3.4	chr15	59610392	59611367	(42379822)	+	(TTCC)n	Simple_repeat	4	1066	(0)	1322451
5639	24.4	10.4	7.2	chr15	59984193	59985899	(42005290)	+	L1MEf	LINE/L1	2920	4683	(1638)	1323072
1475	16.8	0.7	9.2	chr15	59985900	59986203	(42004986)	+	AluJb	SINE/Alu	1	278	(34)	1323074
31	0.0	0.0	0.0	chr15	59986205	59986233	(42004956)	+	(GAAG)n	Simple_repeat	1	29	(0)	1323075
5639	24.4	10.4	7.2	chr15	59986234	59986271	(42004918)	+	L1MEf	LINE/L1	4684	4695	(1626)	1323072
14	4.5	0.0	4.0	chr15	59997380	59997404	(41993785)	+	(CTTT)n	Simple_repeat	1	25	(0)	1323095
33	17.9	0.0	0.0	chr15	59997468	59997526	(41993663)	+	GA-rich	Low_complexity	1	59	(0)	1323096
19	17.1	0.0	4.7	chr15	61003932	61003974	(40987215)	+	(TC)n	Simple_repeat	1	43	(0)	1324638
37	13.3	5.2	1.2	chr15	61004221	61004297	(40986892)	+	GA-rich	Low_complexity	1	81	(0)	1324639
1456	18.6	20.2	5.0	chr15	61334968	61335408	(40655781)	+	MER67D	LTR/ERV1	1	483	(31)	1325167
182	34.0	8.1	3.3	chr15	61335460	61335611	(40655578)	C	MIRc	SINE/MIR	(106)	162	3	1325168
44	0.0	0.0	0.0	chr15	63833754	63833791	(38157398)	+	(CA)n	Simple_repeat	1	38	(0)	1329209
14	12.1	0.0	3.5	chr15	63833955	63833983	(38157206)	+	(GGC)n	Simple_repeat	1	29	(0)	1329210
33	11.8	6.2	0.0	chr15	64699096	64699159	(37292030)	+	(TC)n	Simple_repeat	1	68	(0)	1330983
329	31.2	11.4	0.8	chr15	65517022	65517261	(36473928)	+	MIRc	SINE/MIR	10	260	(8)	1332810
16	16.8	0.0	0.0	chr15	65884759	65884785	(36106404)	+	A-rich	Low_complexity	1	27	(0)	1333559
897	14.7	0.7	0.0	chr15	66279038	66279173	(35712016)	+	AluJb	SINE/Alu	110	246	(66)	1334339
21	3.7	0.0	0.0	chr15	66279336	66279363	(35711826)	+	(TGC)n	Simple_repeat	1	28	(0)	1334340
3168	24.2	7.2	5.4	chr15	67323542	67323935	(34667254)	C	L1MEf	LINE/L1	(4202)	2040	1605	1336427
2390	10.4	0.0	1.0	chr15	67323936	67324244	(34666945)	C	AluSg	SINE/Alu	(4)	306	1	1336430
24	23.8	4.3	3.1	chr15	67590357	67590449	(34400740)	+	(TCCT)n	Simple_repeat	1	97	(0)	1336862
44	11.3	0.0	0.0	chr15	67590407	67590475	(34400714)	+	(CTCT)n	Simple_repeat	1	69	(0)	1336863
1483	17.3	7.8	2.2	chr15	67590476	67590753	(34400436)	C	AluJb	SINE/Alu	(17)	295	1	1336864
541	28.1	3.4	7.0	chr15	67904704	67905005	(34086184)	C	L1MEg	LINE/L1	(4362)	1880	1590	1337335
782	16.8	0.0	0.8	chr15	67905385	67905503	(34085686)	C	AluJr	SINE/Alu	(194)	118	1	1337349
365	12.0	0.0	0.0	chr15	67905521	67905570	(34085619)	C	7SLRNA	srpRNA	(2)	318	269	1337350
13	24.2	1.9	3.8	chr15	68700832	68700883	(33290306)	+	G-rich	Low_complexity	1	53	(0)	1338871
340	28.9	0.9	1.9	chr15	68701192	68701297	(33289892)	+	MIRb	SINE/MIR	2	106	(162)	1338872
1405	7.2	0.0	1.1	chr15	68701298	68701478	(33289711)	C	AluYh3	SINE/Alu	(0)	311	133	1338873
3356	10.3	6.9	0.4	chr15	69007652	69008127	(32983062)	+	LTR10F	LTR/ERV1	1	509	(2)	1339435
25192	12.9	6.4	6.1	chr15	69008128	69008631	(32982558)	C	MER57A-int	LTR/ERV1	(4450)	1737	1321	1339433
1347	27.9	10.1	1.6	chr15	69197522	69197967	(32793222)	C	L2a	LINE/L2	(472)	2954	2933	1339801
400	28.1	9.0	3.0	chr15	70557650	70557847	(31433342)	+	MLT1N2	LTR/ERVL-MaLR	277	487	(75)	1342366
146	26.8	1.2	1.2	chr15	70557897	70558323	(31432866)	+	GA-rich	Low_complexity	1	432	(0)	1342367
40	21.9	2.1	0.0	chr15	70718230	70718323	(31272866)	+	GA-rich	Low_complexity	1	96	(0)	1342626
57	0.0	0.0	0.0	chr15	70718325	70718373	(31272816)	+	(TG)n	Simple_repeat	1	49	(0)	1342627
400	29.1	4.1	11.9	chr15	70718412	70718704	(31272485)	+	MLT1I	LTR/ERVL-MaLR	100	368	(43)	1342628
419	26.5	5.8	10.4	chr15	70718737	70718900	(31272289)	+	MLT1I-int	LTR/ERVL-MaLR	5	160	(1227)	1342628
2126	10.7	0.4	0.0	chr15	70870484	70870789	(31120400)	C	AluSp	SINE/Alu	(0)	313	1	1342905
4473	18.1	9.1	10.7	chr15	71172735	71174148	(30817041)	+	L1MEc	LINE/L1	4125	5375	(941)	1343311
1795	21.2	13.4	3.0	chr15	72512806	72513666	(29477523)	C	L1MD3	LINE/L1	(3560)	2984	1980	1345627
1411	14.2	13.5	1.2	chr15	72513894	72514139	(29477050)	C	AluJb	SINE/Alu	(31)	281	1	1345630
13	13.1	0.0	0.0	chr15	74291623	74291647	(27699542)	+	(AGGC)n	Simple_repeat	1	25	(0)	1348595
55	21.0	3.0	0.7	chr15	74301800	74301930	(27689259)	+	(TC)n	Simple_repeat	1	135	(0)	1348612
1119	12.9	38.6	6.5	chr15	75198624	75199037	(26792152)	C	MER51A	LTR/ERV1	(0)	634	5	1350392
290	5.0	0.0	0.0	chr15	75239688	75239727	(26751462)	+	MER57E1	LTR/ERV1	114	153	(219)	1350430
1025	15.7	7.8	7.1	chr15	75239728	75239980	(26751209)	+	MER57E1	LTR/ERV1	113	367	(5)	1350430
78	15.8	0.0	0.0	chr15	75239981	75240113	(26751076)	+	(CTCT)n	Simple_repeat	1	133	(0)	1350432
2211	13.7	0.3	0.3	chr15	75240114	75240426	(26750763)	C	AluSq2	SINE/Alu	(0)	313	1	1350433
19	13.2	0.0	6.4	chr15	76335895	76335943	(25655246)	+	A-rich	Low_complexity	1	45	(0)	1352419
25	27.4	0.0	2.4	chr15	76335943	76336024	(25655165)	+	GA-rich	Low_complexity	1	82	(0)	1352420
454	22.9	1.6	0.8	chr15	78184867	78184989	(23806200)	+	L1MEf	LINE/L1	121	244	(6156)	1355381
42	17.7	1.3	0.0	chr15	78184994	78185071	(23806118)	+	GA-rich	Low_complexity	1	79	(0)	1355382
734	29.6	11.0	2.3	chr15	78185072	78185468	(23805721)	+	L1MEf	LINE/L1	252	687	(5713)	1355381
227	33.0	14.3	1.5	chr15	78374904	78375365	(23615824)	C	L2c	LINE/L2	(524)	2895	2365	1355756
1891	16.6	0.0	0.7	chr15	78437008	78437296	(23553893)	C	AluJr	SINE/Alu	(21)	291	5	1355901
895	29.9	13.6	4.9	chr15	78437297	78437621	(23553568)	C	L2	LINE/L2	(1195)	2224	1838	1355900
182	17.1	14.6	0.0	chr15	78437732	78437772	(23553417)	C	L2c	LINE/L2	(0)	3387	3340	1355902
413	22.2	19.2	3.1	chr15	80088767	80088896	(21902293)	C	MER3	DNA/hAT-Charlie	(4)	205	50	1358959
245	34.0	8.3	3.8	chr15	80088970	80089241	(21901948)	+	L2c	LINE/L2	2913	3320	(67)	1358960
2728	14.0	6.3	6.7	chr15	80295652	80296172	(21695017)	C	LTR12F	LTR/ERV1	(0)	519	1	1359318
5897	13.4	5.7	5.1	chr15	80296173	80296258	(21694931)	C	MER52C	LTR/ERV1	(1025)	253	164	1359317
402	14.5	0.0	0.0	chr15	80296259	80296320	(21694869)	C	MER52C	LTR/ERV1	(1216)	62	1	1359317
32	15.4	1.7	0.0	chr15	80296325	80296382	(21694807)	+	GA-rich	Low_complexity	1	59	(0)	1359319
3497	13.7	8.9	0.8	chr15	80296384	80296980	(21694209)	C	MLT2B5	LTR/ERVL	(67)	650	1	1359320
244	30.0	9.6	3.2	chr15	80652863	80653017	(21338172)	C	L1MEg	LINE/L1	(5998)	402	237	1359858
13862	21.3	3.0	2.8	chr15	81457384	81459653	(20531536)	C	L1PB4	LINE/L1	(2659)	4453	2173	1361308
2492	5.7	0.0	1.7	chr15	81564966	81565251	(20425938)	C	AluY	SINE/Alu	(30)	281	1	1361478
2245	28.7	13.2	2.1	chr15	81565252	81565291	(20425898)	+	L2a	LINE/L2	2917	2949	(470)	1361477
106	6.1	1.4	1.4	chr15	81565292	81565433	(20425756)	+	(TC)n	Simple_repeat	1	144	(0)	1361480
2245	27.1	17.8	0.6	chr15	81565434	81565780	(20425409)	+	L2a	LINE/L2	2950	3374	(52)	1361477
939	25.1	13.3	6.2	chr15	81633730	81634196	(20356993)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	1361577
101	5.2	4.9	0.0	chr15	81878199	81878340	(20112849)	+	(CT)n	Simple_repeat	1	149	(0)	1361954
3543	28.3	10.7	5.7	chr15	82310432	82311286	(19679903)	C	HAL1	LINE/L1	(423)	2084	1150	1362696
58	4.5	1.4	0.0	chr15	82311287	82311355	(19679834)	+	(CTCC)n	Simple_repeat	1	70	(0)	1362698
3543	28.3	10.7	5.7	chr15	82311356	82311386	(19679803)	C	HAL1	LINE/L1	(1358)	1149	1149	1362696
1706	17.6	5.5	0.3	chr15	82311387	82311676	(19679513)	C	AluJb	SINE/Alu	(6)	306	1	1362699
1054	21.1	19.9	1.9	chr15	83534029	83534351	(18456838)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1364774
11	20.3	5.3	5.0	chr15	83534578	83534634	(18456555)	+	A-rich	Low_complexity	1	60	(0)	1364775
335	28.1	0.0	3.7	chr15	83534688	83534794	(18456395)	+	HAL1b	LINE/L1	1454	1556	(865)	1364776
224	30.0	5.3	8.1	chr15	83714446	83714638	(18276551)	+	L2b	LINE/L2	3036	3209	(166)	1365030
34	39.4	1.2	1.2	chr15	83714643	83714761	(18276428)	+	(CTCT)n	Simple_repeat	1	121	(0)	1365031
54	4.0	3.7	2.4	chr15	83714762	83714843	(18276346)	+	(TCTT)n	Simple_repeat	1	85	(0)	1365032
441	22.9	2.9	15.8	chr15	84846709	84846739	(17144450)	+	L1MEf	LINE/L1	1287	1318	(5229)	1366749
1710	11.9	2.2	5.6	chr15	84846740	84847025	(17144164)	C	AluSq	SINE/Alu	(0)	313	38	1366752
4885	21.0	2.7	4.5	chr15	84847026	84847208	(17143981)	+	L1MEf	LINE/L1	1319	1469	(5078)	1366749
48	0.0	0.0	0.0	chr15	84847209	84847249	(17143940)	+	(GA)n	Simple_repeat	1	41	(0)	1366753
4885	21.0	2.7	4.3	chr15	84847250	84847776	(17143413)	+	L1MEf	LINE/L1	1468	1998	(4642)	1366749
5970	17.7	4.6	2.5	chr15	85049713	85051445	(16939744)	C	L1MB3	LINE/L1	(409)	6010	4229	1367183
2121	10.8	6.8	0.0	chr15	85051467	85051810	(16939379)	C	L1PA11	LINE/L1	(1)	6173	5805	1367185
641	30.5	3.7	0.8	chr15	85757941	85758178	(16233011)	+	MLT1J	LTR/ERVL-MaLR	108	352	(160)	1368293
18	12.6	0.0	0.0	chr15	85758188	85758214	(16232975)	+	(GA)n	Simple_repeat	1	27	(0)	1368294
20	28.8	4.4	2.5	chr15	88639010	88639123	(13352066)	+	(GCAGCG)n	Simple_repeat	1	119	(0)	1372728
337	30.5	6.6	2.1	chr15	89633463	89633606	(12357583)	C	MIRb	SINE/MIR	(48)	220	70	1374592
2299	10.2	0.0	0.0	chr15	89634017	89634310	(12356879)	+	AluSx1	SINE/Alu	1	294	(18)	1374593
183	24.9	2.5	0.8	chr15	91304213	91304692	(10686497)	+	GA-rich	Low_complexity	1	492	(0)	1378069
210	28.9	10.2	1.0	chr15	91304695	91304792	(10686397)	+	MIRc	SINE/MIR	33	140	(128)	1378070
251	25.4	11.2	0.0	chr15	91846091	91846161	(10145028)	C	MER5A1	DNA/hAT-Charlie	(0)	166	87	1378960
106	15.4	3.1	1.8	chr15	91846174	91846395	(10144794)	+	(CTCC)n	Simple_repeat	1	229	(0)	1378961
244	15.6	2.2	0.0	chr15	91846402	91846446	(10144743)	C	MER5A1	DNA/hAT-Charlie	(120)	46	1	1378960
217	27.1	0.0	0.0	chr15	91846573	91846620	(10144569)	C	L3	LINE/CR1	(3636)	463	416	1378962
250	20.4	5.3	0.0	chr15	92610977	92611030	(9380159)	+	L2a	LINE/L2	3370	3426	(0)	1380102
133	19.4	2.0	1.6	chr15	92611031	92611330	(9379859)	+	GA-rich	Low_complexity	1	306	(0)	1380103
18	4.7	0.0	0.0	chr15	92900204	92900225	(9090964)	+	(TC)n	Simple_repeat	1	22	(0)	1380713
2947	26.1	8.3	9.7	chr15	93230345	93231304	(8759885)	C	L1MEf	LINE/L1	(5054)	1586	578	1381256
33	0.0	0.0	0.0	chr15	93231305	93231332	(8759857)	+	(GA)n	Simple_repeat	1	28	(0)	1381259
1175	27.0	7.8	3.4	chr15	93231354	93231820	(8759369)	C	L1MD2	LINE/L1	(5879)	761	38	1381260
55	12.1	5.0	0.0	chr15	93358957	93359056	(8632133)	+	GA-rich	Low_complexity	1	105	(0)	1381524
1158	18.7	0.0	4.2	chr15	93359175	93359386	(8631803)	C	Tigger7	DNA/TcMar-Tigger	(2287)	204	2	1381525
21	6.9	0.0	0.0	chr15	93572830	93572860	(8418329)	+	(CCTC)n	Simple_repeat	1	31	(0)	1381863
1175	17.6	0.4	3.2	chr15	93722151	93722397	(8268792)	C	L1MD3	LINE/L1	(23)	7972	7733	1382063
856	23.3	8.2	2.8	chr15	93722601	93722939	(8268250)	C	L1MD2	LINE/L1	(1669)	6116	5734	1382064
356	23.3	2.2	4.3	chr15	93829780	93829873	(8161316)	C	LTR33	LTR/ERVL	(106)	414	320	1382194
67	0.0	0.0	0.0	chr15	93829966	93830022	(8161167)	+	(CA)n	Simple_repeat	1	57	(0)	1382195
77	17.3	6.6	1.0	chr15	93830027	93830222	(8160967)	+	(CT)n	Simple_repeat	1	209	(0)	1382196
21	23.0	4.8	3.4	chr15	93870100	93870183	(8121006)	+	GA-rich	Low_complexity	1	88	(0)	1382260
289	32.1	7.8	6.6	chr15	93870267	93870569	(8120620)	+	L2	LINE/L2	1420	1726	(1693)	1382261
138	16.1	2.0	3.0	chr15	94298763	94299060	(7692129)	+	(TCTCCC)n	Simple_repeat	1	304	(0)	1382876
686	35.6	9.2	3.3	chr15	94558566	94559415	(7431774)	+	L2	LINE/L2	509	1413	(2006)	1383187
71	19.6	2.5	1.2	chr15	94744853	94744867	(7246322)	+	GA-rich	Low_complexity	1	163	(0)	1383459
78	14.9	0.0	2.1	chr15	94744868	94745011	(7246178)	+	G-rich	Low_complexity	1	144	(0)	1383460
636	34.1	9.7	1.2	chr15	95079860	95080272	(6910917)	+	LTR16D2	LTR/ERVL	99	580	(71)	1383908
1718	9.6	14.3	0.0	chr15	95080623	95080873	(6910316)	C	AluSc	SINE/Alu	(16)	293	1	1383909
45	34.4	0.6	2.2	chr15	95239279	95239457	(6751732)	+	G-rich	Low_complexity	1	180	(0)	1384145
256	30.2	9.2	1.5	chr15	95239542	95239672	(6751517)	+	MIR1_Amn	SINE/MIR	7	148	(82)	1384146
60	1.7	0.0	0.0	chr15	95439285	95439343	(6551846)	+	(CCCTCTCTCT)n	Simple_repeat	1	59	(0)	1384449
16	13.7	0.0	0.0	chr15	95439355	95439379	(6551810)	+	(T)n	Simple_repeat	1	25	(0)	1384450
2241	12.7	0.3	0.0	chr15	95622354	95622652	(6368537)	+	AluSq2	SINE/Alu	1	300	(13)	1384720
485	29.0	9.3	2.6	chr15	95622771	95622961	(6368228)	C	MIRb	SINE/MIR	(6)	262	58	1384721
250	32.8	4.9	2.1	chr15	95622968	95623107	(6368082)	C	MER67A	LTR/ERV1	(5)	538	395	1384722
58	25.9	1.9	0.6	chr15	96029062	96029223	(5961966)	+	GA-rich	Low_complexity	1	165	(0)	1385272
21	20.7	1.9	1.9	chr15	96327105	96327156	(5664033)	+	GA-rich	Low_complexity	1	53	(0)	1385723
16	16.8	0.0	0.0	chr15	96330806	96330833	(5660356)	+	(GT)n	Simple_repeat	1	28	(0)	1385726
71	27.5	0.8	3.9	chr15	96331043	96331299	(5659890)	+	(GGC)n	Simple_repeat	1	259	(0)	1385727
982	27.6	14.1	1.4	chr15	97165644	97166132	(4825057)	+	L2	LINE/L2	2455	3015	(404)	1386883
520	29.1	11.4	1.6	chr15	97166153	97166585	(4824604)	+	L2a	LINE/L2	2933	3413	(13)	1386880
11	12.8	8.8	0.0	chr15	97430888	97430921	(4560268)	+	(TGATAAT)n	Simple_repeat	1	37	(0)	1387174
2296	11.6	0.0	0.0	chr15	97431086	97431379	(4559810)	+	AluSx1	SINE/Alu	1	294	(18)	1387175
383	27.1	14.3	1.4	chr15	97650242	97650387	(4340802)	C	MIRb	SINE/MIR	(100)	168	1	1387467
802	27.1	7.3	2.5	chr15	98356192	98356505	(3634684)	+	L2a	LINE/L2	3055	3384	(42)	1388506
35	18.0	1.4	0.0	chr15	98356517	98356587	(3634602)	+	GA-rich	Low_complexity	1	72	(0)	1388508
2222	12.8	1.8	2.2	chr15	98356769	98357340	(3633849)	+	L1MC	LINE/L1	5041	5610	(723)	1388509
545	23.2	5.0	2.8	chr15	98362947	98363159	(3628030)	+	L1ME4b	LINE/L1	1	218	(674)	1388523
43	23.8	0.5	2.6	chr15	98363181	98363292	(3627897)	+	GA-rich	Low_complexity	1	109	(0)	1388524
727	28.6	6.4	10.4	chr15	98363449	98363889	(3627300)	+	ERV3-16A3_LTR	LTR/ERVL	1	422	(0)	1388525
89	22.9	0.0	3.5	chr15	100011256	100011485	(1979704)	+	GA-rich	Low_complexity	1	230	(0)	1390929
47	10.6	0.0	6.3	chr15	100374091	100374185	(1617004)	+	(CTCC)n	Simple_repeat	1	95	(0)	1391364
274	30.1	1.8	1.0	chr15	100767182	100767321	(1223868)	C	MIRc	SINE/MIR	(102)	166	22	1391914
44	26.5	1.5	1.5	chr15	100767329	100767459	(1223730)	+	(TCCC)n	Simple_repeat	1	133	(0)	1391915
236	32.5	0.0	0.0	chr15	101645911	101645993	(345196)	+	L1M2	LINE/L1	5485	5567	(724)	1393057
737	27.2	8.9	2.5	chr15	101646120	101646540	(344649)	+	L1ME3E	LINE/L1	5769	6234	(9)	1393056
850	23.8	6.9	1.5	chr15	101834877	101835081	(156108)	+	MLT2F	LTR/ERVL	21	237	(426)	1393333
914	25.4	0.9	0.0	chr15	101835154	101835373	(155816)	+	MLT2F	LTR/ERVL	442	663	(0)	1393333
17	24.5	0.0	7.7	chr16	914760	914837	(89423508)	+	(TCCC)n	Simple_repeat	1	78	(0)	1395327
212	20.8	2.9	1.1	chr16	1075835	1076353	(89261992)	+	(CCTCTC)n	Simple_repeat	1	528	(0)	1395476
198	25.0	6.4	7.4	chr16	1092180	1092274	(89246071)	+	L2b	LINE/L2	3263	3356	(19)	1395493
267	26.3	19.9	0.0	chr16	1707642	1707774	(88630571)	+	MIR3	SINE/MIR	40	205	(3)	1396285
676	21.6	2.0	1.6	chr16	3198172	3198385	(87139960)	C	MLT2B4	LTR/ERVL	(54)	502	237	1398715
4823	15.4	3.0	16.0	chr16	3335116	3335520	(87002825)	C	L1MA4	LINE/L1	(1437)	4891	4485	1398973
1649	12.0	0.0	0.0	chr16	3335521	3335745	(87002600)	C	AluSx1	SINE/Alu	(6)	306	82	1398980
45	15.9	0.0	0.0	chr16	5130434	5130513	(85207832)	+	(TCTC)n	Simple_repeat	1	80	(0)	1402633
120	24.9	1.6	1.2	chr16	5228590	5228907	(85109438)	+	GA-rich	Low_complexity	1	323	(0)	1402854
18	12.1	0.0	0.0	chr16	5229034	5229061	(85109284)	+	(TG)n	Simple_repeat	1	28	(0)	1402855
115	13.2	0.0	2.5	chr16	5742177	5742379	(84595966)	+	(TCCT)n	Simple_repeat	1	203	(0)	1403909
16	23.6	0.0	0.0	chr16	6214166	6214200	(84124145)	+	(CT)n	Simple_repeat	1	35	(0)	1404866
293	14.3	0.0	0.0	chr16	6214248	6214289	(84124056)	+	MER103C	DNA/hAT-Charlie	146	187	(110)	1404867
496	15.2	1.1	6.0	chr16	6214303	6215480	(84122865)	+	G-rich	Low_complexity	1	1191	(0)	1404868
237	14.3	1.4	8.4	chr16	7229489	7230136	(83108209)	+	GA-rich	Low_complexity	1	657	(0)	1406776
1539	16.5	3.2	4.9	chr16	8520549	8520833	(81817512)	+	AluJr	SINE/Alu	9	288	(24)	1409193
42	25.6	1.0	0.0	chr16	8520837	8520940	(81817405)	+	G-rich	Low_complexity	1	105	(0)	1409194
74	0.0	0.0	0.0	chr16	8520942	8521007	(81817338)	+	(GGAA)n	Simple_repeat	1	66	(0)	1409195
263	34.5	0.9	1.8	chr16	8521011	8521122	(81817223)	C	MIR	SINE/MIR	(148)	114	4	1409192
550	30.4	2.8	10.0	chr16	9424597	9424907	(80913438)	+	MLT1K	LTR/ERVL-MaLR	148	435	(160)	1411333
137	25.2	1.7	0.6	chr16	9424908	9425253	(80913092)	+	GA-rich	Low_complexity	1	352	(0)	1411334
23	24.3	6.0	0.0	chr16	9490244	9490327	(80848018)	+	GA-rich	Low_complexity	1	89	(0)	1411457
496	34.8	1.5	2.6	chr16	9490387	9490637	(80847708)	C	MIRb	SINE/MIR	(1)	261	10	1411458
1955	14.1	0.0	0.0	chr16	10203401	10203676	(80134669)	+	AluSx	SINE/Alu	3	278	(34)	1412902
135	2.2	0.0	1.4	chr16	10203677	10203816	(80134529)	+	(GAAA)n	Simple_repeat	1	140	(0)	1412903
55	19.0	0.0	3.9	chr16	10203823	10203950	(80134395)	+	GA-rich	Low_complexity	1	128	(0)	1412904
233	28.6	2.1	3.2	chr16	10203952	10204045	(80134300)	+	MER5B	DNA/hAT-Charlie	80	172	(6)	1412905
397	23.6	9.7	1.6	chr16	10204071	10204233	(80134112)	+	MIR	SINE/MIR	69	267	(1)	1412906
409	27.1	2.0	0.8	chr16	13126409	13127589	(77210756)	+	GA-rich	Low_complexity	1	1205	(0)	1419449
730	22.7	3.0	0.0	chr16	13906950	13907077	(76431268)	+	FLAM_A	SINE/Alu	1	132	(10)	1421125
65	1.7	0.0	0.0	chr16	13907087	13907146	(76431199)	+	(GA)n	Simple_repeat	1	60	(0)	1421126
1668	10.3	0.4	6.5	chr16	15056497	15056757	(75281588)	+	AluJr	SINE/Alu	4	248	(64)	1423503
2082	11.7	0.7	1.3	chr16	15452004	15452303	(74886042)	+	AluJr4	SINE/Alu	6	303	(9)	1424439
33	15.8	0.0	0.0	chr16	15452311	15452405	(74885940)	+	GA-rich	Low_complexity	1	95	(0)	1424440
303	28.6	7.3	0.1	chr16	15675830	15675965	(74662380)	+	MIRc	SINE/MIR	7	159	(109)	1424941
30	34.7	2.5	0.0	chr16	15676092	15676212	(74662133)	+	(TCTC)n	Simple_repeat	1	124	(0)	1424942
1903	11.7	5.1	1.0	chr16	15676213	15676511	(74661834)	C	AluSx	SINE/Alu	(0)	312	1	1424943
247	33.6	4.9	2.8	chr16	16907111	16907251	(73431094)	C	L2b	LINE/L2	(552)	2867	2724	1427925
54	3.7	0.0	0.0	chr16	16907486	16907540	(73430805)	+	(CA)n	Simple_repeat	1	55	(0)	1427926
241	30.3	7.3	6.2	chr16	16907573	16907653	(73430692)	+	MIR1_Amn	SINE/MIR	73	154	(76)	1427927
286	29.5	7.0	1.5	chr16	16907622	16907755	(73430590)	+	MIRc	SINE/MIR	121	262	(6)	1427928
200	37.5	0.8	0.0	chr16	17561482	17561609	(72776736)	+	L2a	LINE/L2	2954	3082	(337)	1429374
759	0.0	0.0	0.0	chr16	22195710	22195792	(68142553)	C	tRNA-Leu-CTA	tRNA	(2)	83	1	1439502
254	19.7	10.3	0.0	chr16	22196347	22196407	(68141938)	C	MIR	SINE/MIR	(118)	144	77	1439497
1710	17.5	3.4	0.0	chr16	24494423	24494707	(65843638)	+	AluSz6	SINE/Alu	1	295	(17)	1444828
826	24.3	5.1	0.0	chr16	24494708	24494876	(65843469)	+	AluJb	SINE/Alu	134	311	(1)	1444829
31	0.0	0.0	0.0	chr16	24494905	24494931	(65843414)	+	(GA)n	Simple_repeat	1	27	(0)	1444830
312	18.5	0.0	0.2	chr16	24494932	24494998	(65843347)	+	MIR	SINE/MIR	27	93	(115)	1444831
3734	14.1	3.1	2.0	chr16	24495000	24495637	(65842708)	C	LTR9D	LTR/ERV1	(0)	645	1	1444832
1796	18.3	0.7	0.7	chr16	24872868	24873167	(65465178)	+	AluSx1	SINE/Alu	13	312	(0)	1445710
69	10.4	0.0	0.9	chr16	24873168	24873304	(65465041)	+	(AAGG)n	Simple_repeat	1	135	(0)	1445711
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
219	22.6	3.0	1.8	chr16	26747283	26747873	(63590472)	+	(TC)n	Simple_repeat	1	609	(0)	1449612
15	9.7	0.0	0.0	chr16	26747873	26747894	(63590451)	+	(CA)n	Simple_repeat	1	22	(0)	1449613
942	30.5	5.2	5.2	chr16	27027870	27028353	(63309992)	+	LTR16C	LTR/ERVL	1	484	(5)	1450208
204	15.6	0.0	0.0	chr16	27869335	27869366	(62468979)	+	L2b	LINE/L2	3327	3358	(17)	1452102
295	21.7	1.3	0.6	chr16	27869388	27870057	(62468288)	+	(CTCT)n	Simple_repeat	1	679	(0)	1452103
319	30.0	7.4	4.3	chr16	27870058	27870266	(62468079)	C	L1MEd	LINE/L1	(5899)	1187	972	1452104
96	20.3	1.5	0.5	chr16	27870267	27870471	(62467874)	+	(CT)n	Simple_repeat	1	208	(0)	1452105
12	19.6	2.9	0.0	chr16	27870512	27870546	(62467799)	+	(CATCTC)n	Simple_repeat	1	36	(0)	1452106
1347	24.9	4.6	6.0	chr16	29237903	29238321	(61100024)	C	L1MC4	LINE/L1	(931)	7111	6699	1455393
95	15.0	1.9	4.2	chr16	29238324	29238536	(61099809)	+	G-rich	Low_complexity	1	217	(0)	1455394
459	25.7	19.3	2.6	chr16	29238575	29238615	(61099730)	C	L1MC4	LINE/L1	(1373)	6669	6624	1455393
46	0.0	0.0	0.0	chr16	29238616	29238654	(61099691)	+	(CA)n	Simple_repeat	1	39	(0)	1455395
489	25.8	18.8	2.6	chr16	29238655	29238845	(61099500)	C	L1MC4	LINE/L1	(1419)	6623	6388	1455393
1935	16.5	0.3	0.7	chr16	29944267	29944569	(60393776)	+	AluJb	SINE/Alu	1	302	(10)	1456932
241	36.5	10.1	1.2	chr16	29944570	29944586	(60393759)	C	L2c	LINE/L2	(949)	2470	2454	1456923
1557	18.2	5.3	6.1	chr16	29944594	29944895	(60393450)	C	L1MB5	LINE/L1	(6)	6168	5874	1456933
38	20.4	1.2	0.0	chr16	30378822	30378906	(59959439)	+	G-rich	Low_complexity	1	86	(0)	1457880
458	33.1	3.6	2.1	chr16	30711107	30711300	(59627045)	C	L2c	LINE/L2	(9)	3378	3182	1458714
44	19.5	0.9	4.3	chr16	31404778	31404891	(58933454)	+	(TCCT)n	Simple_repeat	1	115	(0)	1460241
1116	19.7	0.6	0.0	chr16	31404893	31405075	(58933270)	C	AluSx	SINE/Alu	(3)	309	126	1460242
1630	9.1	0.9	0.0	chr16	31405076	31405284	(58933061)	C	AluSz	SINE/Alu	(101)	211	1	1460243
15	25.6	0.0	2.1	chr16	31569612	31569659	(58768686)	+	(GCG)n	Simple_repeat	1	48	(0)	1460571
45	4.2	0.0	0.0	chr16	31569725	31569774	(58768571)	+	(CTCC)n	Simple_repeat	1	50	(0)	1460572
2294	11.3	1.3	0.3	chr16	31569791	31570099	(58768246)	C	AluSx	SINE/Alu	(0)	312	1	1460573
1874	21.5	6.6	1.3	chr16	31874324	31874780	(58463565)	C	MER57E3	LTR/ERV1	(4)	483	1	1460888
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
1481	25.7	4.6	7.4	chr16	34038051	34038321	(56300024)	C	MLT1D	LTR/ERVL-MaLR	(229)	276	5	1463524
176	26.5	2.1	2.8	chr16	34038413	34038975	(56299370)	+	GA-rich	Low_complexity	1	575	(0)	1463526
404	19.2	1.4	0.0	chr16	34062434	34062506	(56275839)	+	AluSz6	SINE/Alu	225	298	(14)	1463557
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
338	23.5	2.9	0.0	chr16	34063160	34063227	(56275118)	+	AluYh9	SINE/Alu	224	293	(18)	1463560
377	20.6	0.0	0.0	chr16	34063794	34063861	(56274484)	+	AluYj4	SINE/Alu	224	291	(20)	1463563
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
338	14.9	0.0	0.0	chr16	34085515	34085561	(56252784)	C	AluYj4	SINE/Alu	(39)	272	226	1463590
49	10.2	1.2	0.0	chr16	34085562	34085645	(56252700)	+	(CCATT)n	Simple_repeat	1	85	(0)	1463591
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
26	6.4	5.6	4.0	chr16	34951478	34951548	(55386797)	+	(GATTCCATTC)n	Simple_repeat	1	75	(0)	1464279
1867	18.4	1.0	0.0	chr16	46765582	46765915	(43572430)	+	AluJr4	SINE/Alu	2	312	(0)	1465991
79	3.7	0.0	0.0	chr16	46765916	46765998	(43572347)	+	(GAGG)n	Simple_repeat	1	83	(0)	1465992
134	13.3	0.9	0.4	chr16	46765999	46766194	(43572151)	+	(GAAA)n	Simple_repeat	1	197	(0)	1465993
669	17.5	1.5	8.4	chr16	47592960	47593102	(42745243)	+	FLAM_C	SINE/Alu	1	133	(10)	1467367
75	24.4	1.7	0.0	chr16	47593103	47593282	(42745063)	+	GA-rich	Low_complexity	1	183	(0)	1467368
990	14.9	0.0	5.6	chr16	47593283	47593443	(42744902)	+	AluJb	SINE/Alu	135	286	(26)	1467369
1169	22.9	9.3	3.8	chr16	47731315	47731709	(42606636)	C	MLT1H	LTR/ERVL-MaLR	(105)	444	26	1467566
1951	11.2	3.9	0.0	chr16	48164450	48164718	(42173627)	+	AluSq	SINE/Alu	1	280	(33)	1468238
32	0.0	0.0	0.0	chr16	48164720	48164749	(42173596)	+	(TCCC)n	Simple_repeat	1	30	(0)	1468239
17	5.0	0.0	0.0	chr16	48164767	48164787	(42173558)	+	(AT)n	Simple_repeat	1	21	(0)	1468240
10740	5.0	1.7	1.2	chr16	48416183	48417559	(41920786)	C	SVA_B	Retroposon/SVA	(0)	1383	1	1468729
45	11.1	2.6	0.0	chr16	48417560	48417637	(41920708)	+	(GGAGAG)n	Simple_repeat	1	80	(0)	1468730
203	28.2	14.7	3.5	chr16	48417788	48417901	(41920444)	+	MIR3	SINE/MIR	8	136	(72)	1468731
2896	1.0	0.0	1.3	chr16	51704390	51704701	(38633644)	+	AluYa5	SINE/Alu	1	308	(3)	1474831
1693	15.8	14.3	7.6	chr16	51704702	51704937	(38633408)	+	MSTA	LTR/ERVL-MaLR	200	428	(0)	1474830
102	11.3	0.6	1.8	chr16	51871800	51871969	(38466376)	+	(GAAG)n	Simple_repeat	1	171	(0)	1475108
231	35.3	11.1	3.5	chr16	53417221	53417452	(36920893)	+	L2b	LINE/L2	2830	3081	(338)	1477805
512	35.0	3.8	5.5	chr16	53417506	53417835	(36920510)	+	L2b	LINE/L2	3066	3380	(7)	1477805
1673	20.7	0.4	1.1	chr16	54883023	54883302	(35455043)	+	AluJo	SINE/Alu	1	278	(34)	1480335
51	24.9	2.8	3.4	chr16	54883309	54883502	(35454843)	+	GA-rich	Low_complexity	1	192	(0)	1480336
462	28.2	5.9	5.5	chr16	54883506	54883741	(35454604)	+	L1M5	LINE/L1	2593	2829	(3317)	1480337
241	31.6	8.9	1.1	chr16	55846897	55847085	(34491260)	C	MIRb	SINE/MIR	(35)	233	23	1482108
112	18.8	6.5	0.0	chr16	55847136	55847414	(34490931)	+	(CT)n	Simple_repeat	1	297	(0)	1482109
97	6.8	4.2	4.6	chr16	56405993	56406182	(33932163)	+	G-rich	Low_complexity	1	189	(0)	1482990
421	12.5	0.0	0.0	chr16	56406205	56406260	(33932085)	C	FLAM_A	SINE/Alu	(10)	132	77	1482991
1841	16.2	6.0	0.0	chr16	56406289	56406572	(33931773)	+	AluJb	SINE/Alu	1	302	(10)	1482992
548	25.9	3.7	0.0	chr16	56815718	56815848	(33522497)	C	MIR	SINE/MIR	(70)	192	57	1483768
65	4.3	0.0	0.0	chr16	56815860	56815930	(33522415)	+	(CTG)n	Simple_repeat	1	71	(0)	1483769
27	4.5	6.4	0.0	chr16	56815931	56815970	(33522375)	+	(CTA)n	Simple_repeat	2	43	(0)	1483770
870	20.5	8.4	4.0	chr16	56816020	56816268	(33522077)	+	MIR	SINE/MIR	2	262	(0)	1483771
78	12.3	4.3	0.0	chr16	57475661	57475798	(32862547)	+	(TC)n	Simple_repeat	1	144	(0)	1485138
773	23.6	0.7	0.0	chr16	57690906	57691049	(32647296)	+	AluJo	SINE/Alu	168	312	(0)	1485583
45	24.8	1.2	6.0	chr16	57691050	57691213	(32647132)	+	GA-rich	Low_complexity	1	166	(0)	1485584
23	20.7	3.1	0.0	chr16	58934103	58934137	(31404208)	+	(CTTT)n	Simple_repeat	1	37	(0)	1488095
1648	19.4	12.3	1.2	chr16	58934138	58934550	(31403795)	C	MER31B	LTR/ERV1	(0)	466	2	1488096
23	20.7	3.1	0.0	chr16	58934551	58934578	(31403767)	+	(CTTT)n	Simple_repeat	2	29	(0)	1488097
165	15.2	1.4	0.7	chr16	65961826	65962122	(24376223)	+	G-rich	Low_complexity	1	301	(0)	1498821
27	0.0	0.0	0.0	chr16	66269788	66269813	(24068532)	+	(GGAG)n	Simple_repeat	1	26	(0)	1499410
100	25.0	2.7	3.2	chr16	66269920	66270257	(24068088)	+	GA-rich	Low_complexity	1	347	(0)	1499411
72	9.7	5.7	3.6	chr16	66474534	66474545	(23863800)	+	polypurine	Low_complexity	1	13	(0)	1499810
94	5.0	0.0	0.0	chr16	66474546	66474650	(23863695)	+	(GAGG)n	Simple_repeat	1	105	(0)	1499811
72	9.7	5.7	3.6	chr16	66474651	66474795	(23863550)	+	GA-rich	Low_complexity	14	161	(0)	1499812
228	32.2	10.1	2.7	chr16	66474842	66474988	(23863357)	+	MIRb	SINE/MIR	68	226	(42)	1499813
80	4.8	0.0	0.0	chr16	67842863	67842950	(22495395)	+	(GCA)n	Simple_repeat	1	88	(0)	1502468
19	12.9	0.0	2.7	chr16	68085612	68085648	(22252697)	+	(GCC)n	Simple_repeat	1	37	(0)	1502902
11	24.2	5.5	1.7	chr16	68085649	68085665	(22252680)	+	(AGCTGC)n	Simple_repeat	2	58	(0)	1502903
19	15.8	2.8	0.0	chr16	68085887	68085922	(22252423)	+	(TG)n	Simple_repeat	1	37	(0)	1502904
18	22.4	0.0	0.0	chr16	68540317	68540353	(21797992)	+	A-rich	Low_complexity	1	37	(0)	1503729
674	23.7	8.5	4.4	chr16	69339008	69339112	(20999233)	+	MIR	SINE/MIR	150	259	(3)	1505593
1721	14.8	6.0	0.0	chr16	70653417	70653700	(19684645)	+	AluJo	SINE/Alu	1	302	(10)	1508462
1899	12.0	5.8	0.0	chr16	71894255	71894545	(18443800)	C	AluSp	SINE/Alu	(4)	309	1	1510589
1414	14.9	1.3	4.8	chr16	71894559	71894806	(18443539)	C	AluJb	SINE/Alu	(45)	267	29	1510590
2170	9.9	0.7	0.7	chr16	71946977	71947269	(18391076)	+	AluSq2	SINE/Alu	3	295	(18)	1510692
990	11.9	0.6	1.2	chr16	72599045	72599206	(17739139)	+	L1PREC2	LINE/L1	5997	6157	(3)	1511708
16	0.0	0.0	4.2	chr16	73071405	73071428	(17266917)	+	(GAGG)n	Simple_repeat	1	24	(0)	1512355
25	20.3	0.0	0.0	chr16	73071457	73071509	(17266836)	+	(CTG)n	Simple_repeat	1	53	(0)	1512356
193	36.0	6.3	0.0	chr16	73349491	73349579	(16988766)	C	MIRc	SINE/MIR	(64)	204	110	1512854
151	21.6	2.0	0.6	chr16	73349593	73349934	(16988411)	+	(CCTC)n	Simple_repeat	1	349	(0)	1512855
80	2.6	0.0	0.0	chr16	73546663	73546741	(16791604)	+	(TGC)n	Simple_repeat	1	79	(0)	1513170
24	13.2	3.7	3.6	chr16	73804837	73804890	(16533455)	+	(AC)n	Simple_repeat	1	56	(0)	1513563
55	6.2	2.2	3.2	chr16	73804895	73804985	(16533360)	+	(GAGG)n	Simple_repeat	1	93	(0)	1513564
18	20.7	4.2	4.0	chr16	74606844	74606915	(15731430)	+	(TGCTGA)n	Simple_repeat	1	75	(0)	1515037
208	18.2	12.7	0.0	chr16	75116297	75116351	(15221994)	C	MIRc	SINE/MIR	(99)	169	107	1516115
3926	11.9	8.3	12.6	chr16	75116948	75117367	(15220978)	+	MER4D1	LTR/ERV1	1	410	(490)	1516116
715	15.8	8.6	7.3	chr16	75348710	75348870	(14989475)	C	L1M4	LINE/L1	(1602)	4544	4372	1516588
1675	15.2	2.4	4.0	chr16	75348871	75349167	(14989178)	C	AluJr	SINE/Alu	(18)	294	3	1516589
1524	21.2	5.8	4.9	chr16	75927816	75928349	(14409996)	+	MER67C	LTR/ERV1	1	506	(8)	1517674
43	26.7	1.9	6.9	chr16	77799183	77799192	(12539153)	+	(CTCC)n	Simple_repeat	1	213	(0)	1520506
46	23.6	5.5	3.8	chr16	77799193	77799391	(12538954)	+	(CTCTTC)n	Simple_repeat	1	210	(0)	1520507
65	0.0	1.7	0.0	chr16	77799505	77799563	(12538782)	+	(GT)n	Simple_repeat	1	60	(0)	1520508
1012	23.6	4.7	0.8	chr16	78725669	78725912	(11612433)	C	MLT1C	LTR/ERVL-MaLR	(42)	425	172	1522269
67	27.3	6.9	0.3	chr16	78725913	78726189	(11612156)	+	(TCTCTC)n	Simple_repeat	1	295	(0)	1522270
31	5.6	0.0	0.0	chr16	78726190	78726227	(11612118)	+	(TTCC)n	Simple_repeat	1	38	(0)	1522271
1744	17.6	0.7	2.9	chr16	78726228	78726533	(11611812)	C	AluJr	SINE/Alu	(13)	299	1	1522272
138	33.2	1.8	1.0	chr16	79317080	79317584	(11020761)	+	(TCCC)n	Simple_repeat	1	514	(0)	1523316
214	32.9	3.4	0.0	chr16	79317605	79317689	(11020656)	C	L2a	LINE/L2	(50)	3376	3289	1523317
183	21.7	9.4	0.9	chr16	79391834	79392545	(10945800)	+	GA-rich	Low_complexity	1	779	(0)	1523456
19	17.5	0.0	0.0	chr16	79601985	79602022	(10736323)	+	A-rich	Low_complexity	1	38	(0)	1523840
63	3.1	0.0	0.0	chr16	81500240	81500304	(8838041)	+	(TTCC)n	Simple_repeat	1	65	(0)	1527400
107	19.8	1.2	2.4	chr16	81500306	81500478	(8837867)	+	(CCTC)n	Simple_repeat	1	173	(0)	1527401
2404	9.8	0.3	0.0	chr16	81500479	81500784	(8837561)	C	AluSz	SINE/Alu	(1)	311	5	1527402
13396	13.1	2.9	2.2	chr16	81974832	81976733	(8361612)	+	L1PA16	LINE/L1	1992	3903	(2946)	1528421
11107	10.3	3.1	0.0	chr16	82008286	82009816	(8328529)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1528457
916	19.3	0.0	2.9	chr16	82244039	82244199	(8094146)	C	MER5A1	DNA/hAT-Charlie	(0)	166	10	1528894
1102	18.3	23.8	1.1	chr16	82244200	82244558	(8093787)	C	MER31B	LTR/ERV1	(0)	466	1	1528895
1423	15.3	9.8	0.0	chr16	82244610	82244858	(8093487)	+	THE1D	LTR/ERVL-MaLR	106	381	(0)	1528896
1462	18.5	8.8	4.3	chr16	83333878	83334245	(7004100)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	120	1530808
65	15.7	1.7	0.0	chr16	83334247	83334362	(7003983)	+	(TC)n	Simple_repeat	1	118	(0)	1530809
29	0.0	0.0	0.0	chr16	83334362	83334392	(7003953)	+	(CA)n	Simple_repeat	1	31	(0)	1530810
1641	18.7	2.5	3.9	chr16	83334393	83334675	(7003670)	C	AluJo	SINE/Alu	(33)	279	1	1530811
882	29.8	10.3	5.6	chr16	84546772	84547416	(5790929)	C	L2a	LINE/L2	(2)	3424	2741	1533040
278	24.7	13.8	0.0	chr16	84547482	84547562	(5790783)	+	MIRb	SINE/MIR	57	150	(118)	1533041
276	31.6	8.6	0.9	chr16	84633647	84633860	(5704485)	C	LTR33	LTR/ERVL	(6)	509	278	1533255
1536	21.9	3.8	1.6	chr16	84633866	84634231	(5704114)	+	MER31B	LTR/ERV1	17	390	(76)	1533256
759	24.1	7.6	1.7	chr16	84634261	84634496	(5703849)	C	LTR33	LTR/ERVL	(232)	283	33	1533255
2152	7.1	8.2	0.3	chr16	84634562	84634843	(5703502)	C	AluSx1	SINE/Alu	(6)	306	1	1533257
296	31.2	13.7	0.0	chr16	85173907	85174057	(5164288)	C	MIRb	SINE/MIR	(68)	200	20	1534327
114	23.4	5.1	4.7	chr16	85716249	85716734	(4621611)	+	GA-rich	Low_complexity	1	511	(0)	1535286
180	22.6	1.5	1.0	chr16	85834005	85834416	(4503929)	+	GA-rich	Low_complexity	1	418	(0)	1535533
517	27.6	8.3	2.2	chr16	85834488	85834713	(4503632)	C	MLT1J	LTR/ERVL-MaLR	(111)	401	161	1535534
2120	15.1	0.0	1.9	chr16	85855879	85856175	(4482170)	C	AluSp	SINE/Alu	(21)	292	1	1535569
268	23.9	0.0	1.4	chr16	85856176	85856247	(4482098)	C	MLT1H2	LTR/ERVL-MaLR	(444)	105	35	1535566
2433	20.7	8.1	3.7	chr16	86003816	86004413	(4333932)	+	MLT1E2	LTR/ERVL-MaLR	1	627	(0)	1535841
238	17.9	1.8	3.5	chr16	86039997	86040054	(4298291)	C	MER46C	DNA/TcMar-Tigger	(26)	312	256	1535925
280	6.8	0.0	0.0	chr16	86040058	86040101	(4298244)	C	MLT2B4	LTR/ERVL	(1)	555	514	1535926
308	30.6	4.9	0.7	chr16	86189825	86189909	(4148436)	C	L1MEa	LINE/L1	(5100)	970	880	1536212
1679	16.9	5.9	0.0	chr16	86189910	86190127	(4148218)	C	MER44A	DNA/TcMar-Tigger	(0)	339	102	1536213
129	0.8	3.0	0.0	chr16	86190128	86190258	(4148087)	+	(CCTCTCTCTC)n	Simple_repeat	1	135	(0)	1536214
1679	16.9	5.9	0.0	chr16	86190259	86190358	(4147987)	C	MER44A	DNA/TcMar-Tigger	(238)	101	2	1536213
308	30.6	4.9	0.7	chr16	86190359	86190410	(4147935)	C	L1MEa	LINE/L1	(5191)	879	828	1536212
275	22.2	1.2	11.0	chr16	86190424	86190514	(4147831)	C	L1ME3	LINE/L1	(6)	6156	6075	1536215
323	20.9	10.8	0.0	chr16	86228573	86228709	(4109636)	C	L1ME2z	LINE/L1	(0)	6444	6343	1536291
36	14.1	0.0	1.5	chr16	86228710	86228775	(4109570)	+	(CTCC)n	Simple_repeat	1	66	(0)	1536292
1597	12.8	5.2	1.1	chr16	86228807	86229083	(4109262)	C	THE1D	LTR/ERVL-MaLR	(92)	289	1	1536293
44	26.6	6.4	3.2	chr16	86683026	86683260	(3655085)	+	G-rich	Low_complexity	1	250	(0)	1537074
239	39.0	0.0	0.0	chr16	86683408	86683502	(3654843)	C	MIRb	SINE/MIR	(69)	199	105	1537075
31	11.0	0.0	0.0	chr16	86684272	86684320	(3654025)	+	(TC)n	Simple_repeat	1	49	(0)	1537076
27	20.1	5.7	3.6	chr16	87178118	87178222	(3160123)	+	(AGAGAC)n	Simple_repeat	1	111	(0)	1537954
229	25.7	1.7	0.0	chr16	87178412	87178987	(3159358)	+	(CT)n	Simple_repeat	1	586	(0)	1537955
46	19.8	4.8	1.6	chr16	87620421	87620551	(2717794)	+	GA-rich	Low_complexity	1	135	(0)	1538802
262	27.8	10.0	2.6	chr16	87620653	87620825	(2717520)	C	MIR	SINE/MIR	(51)	211	23	1538803
1242	24.2	4.8	8.1	chr16	88208035	88208443	(2129902)	C	L1MC4a	LINE/L1	(931)	7179	6785	1539677
106	14.3	2.7	3.0	chr16	88208464	88208688	(2129657)	+	G-rich	Low_complexity	1	231	(0)	1539679
15	15.0	0.0	0.0	chr16	88208698	88208727	(2129618)	+	(AGACA)n	Simple_repeat	1	30	(0)	1539680
23	3.2	3.0	0.0	chr16	88208780	88208803	(2129542)	+	(CA)n	Simple_repeat	1	24	(0)	1539681
37	0.0	0.0	0.0	chr16	88208804	88208835	(2129510)	+	(CT)n	Simple_repeat	1	32	(0)	1539682
362	32.4	2.8	2.8	chr16	89602098	89602275	(736070)	+	MLT1F1	LTR/ERVL-MaLR	392	569	(0)	1541524
349	28.6	11.9	2.8	chr17	289060	289235	(82968206)	+	MIRb	SINE/MIR	28	221	(47)	1544938
437	34.0	12.0	4.2	chr17	289260	290050	(82967391)	+	L2b	LINE/L2	2477	3331	(44)	1544939
389	34.8	1.3	9.9	chr17	376780	377041	(82880400)	+	L1M5	LINE/L1	4906	5144	(1002)	1545080
586	23.3	4.1	1.8	chr17	377051	377241	(82880200)	C	MLT1A	LTR/ERVL-MaLR	(4)	392	204	1545081
75	27.1	0.9	0.9	chr17	377246	377376	(82880065)	+	GA-rich	Low_complexity	1	132	(0)	1545082
819	14.3	0.0	2.4	chr17	377377	377502	(82879939)	+	AluJo	SINE/Alu	1	123	(189)	1545083
75	27.1	0.9	0.9	chr17	377503	377581	(82879860)	+	GA-rich	Low_complexity	133	211	(0)	1545084
462	27.5	6.3	2.7	chr17	377591	377773	(82879668)	C	MLT1A	LTR/ERVL-MaLR	(181)	193	4	1545081
206	33.3	3.2	0.0	chr17	543710	543769	(82713672)	+	MIR3	SINE/MIR	37	98	(110)	1545347
119	22.9	1.7	1.0	chr17	543776	544065	(82713376)	+	GA-rich	Low_complexity	1	295	(0)	1545348
37	10.0	3.0	1.4	chr17	872189	872255	(82385186)	+	(GAGG)n	Simple_repeat	1	69	(0)	1545936
1193	19.4	6.2	8.4	chr17	872508	872611	(82384830)	+	MLT2B4	LTR/ERVL	1	100	(456)	1545937
2376	10.1	0.7	0.0	chr17	872612	872917	(82384524)	C	AluSq2	SINE/Alu	(4)	309	2	1545938
191	12.8	1.5	5.0	chr17	3917991	3918388	(79339053)	+	G-rich	Low_complexity	1	404	(0)	1552005
50	0.0	0.0	0.0	chr17	3918431	3918475	(79338966)	+	(TCC)n	Simple_repeat	1	45	(0)	1552006
13	31.4	0.0	3.2	chr17	3918491	3918552	(79338889)	+	(CTGA)n	Simple_repeat	1	62	(0)	1552007
280	25.6	5.7	2.4	chr17	4834377	4834460	(78422981)	C	LTR85a	LTR/Gypsy?	(269)	433	347	1553891
12	12.8	8.8	0.0	chr17	4948398	4948431	(78309010)	+	(GCT)n	Simple_repeat	1	37	(0)	1554112
2119	13.0	0.0	0.0	chr17	5158285	5158569	(78098872)	+	AluSz6	SINE/Alu	1	285	(27)	1554524
100	4.0	0.0	0.0	chr17	5158570	5158672	(78098769)	+	(AG)n	Simple_repeat	1	103	(0)	1554525
1337	25.3	14.3	8.9	chr17	5158673	5158879	(78098562)	C	L2	LINE/L2	(1238)	2181	1929	1554522
233	25.6	0.0	10.0	chr17	5158942	5159071	(78098370)	+	L1MC5	LINE/L1	9164	9280	(24)	1554526
242	25.7	1.4	0.0	chr17	5281840	5281909	(77975532)	C	MIRc	SINE/MIR	(144)	124	54	1554824
14	0.0	0.0	0.0	chr17	5282377	5282394	(77975047)	+	(GGC)n	Simple_repeat	1	18	(0)	1554825
136	14.7	3.8	1.7	chr17	6094537	6094824	(77162617)	+	GA-rich	Low_complexity	1	299	(0)	1556396
53	19.8	0.0	0.0	chr17	6463416	6463521	(76793920)	+	G-rich	Low_complexity	1	106	(0)	1557141
229	38.0	6.1	0.0	chr17	6463530	6463621	(76793820)	C	MIR3	SINE/MIR	(81)	127	30	1557142
377	28.3	8.9	0.0	chr17	6767515	6767687	(76489754)	C	L1MC5a	LINE/L1	(101)	2676	2487	1557672
31	0.0	0.0	0.0	chr17	6767737	6767765	(76489676)	+	(CTG)n	Simple_repeat	1	29	(0)	1557674
4132	25.3	6.4	9.1	chr17	6767768	6768110	(76489331)	C	L1MEd	LINE/L1	(5052)	2034	1695	1557675
20	17.1	1.9	3.8	chr17	7217607	7217658	(76039783)	+	GA-rich	Low_complexity	1	53	(0)	1558469
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
20	5.4	0.0	10.4	chr17	8373093	8373140	(74884301)	+	(TCTCCC)n	Simple_repeat	1	48	(0)	1560681
10727	4.0	0.4	8.3	chr17	8373141	8374641	(74882800)	+	SVA_B	Retroposon/SVA	1	1383	(0)	1560682
1684	18.0	3.0	9.9	chr17	8769189	8769582	(74487859)	+	MLT1A	LTR/ERVL-MaLR	1	366	(8)	1561437
972	26.5	10.5	6.9	chr17	8769756	8770407	(74487034)	+	L1MEh	LINE/L1	693	1370	(865)	1561438
265	25.3	2.6	2.6	chr17	8827347	8827423	(74430018)	+	MIR3	SINE/MIR	60	136	(72)	1561544
18	10.8	3.3	0.0	chr17	8827695	8827724	(74429717)	+	(GT)n	Simple_repeat	1	31	(0)	1561545
84	0.0	1.3	0.0	chr17	8827743	8827817	(74429624)	+	(GA)n	Simple_repeat	1	76	(0)	1561546
13	10.8	3.1	3.0	chr17	8828056	8828087	(74429354)	+	(CCCTG)n	Simple_repeat	1	33	(0)	1561547
629	28.9	1.7	2.0	chr17	8828191	8828391	(74429050)	+	MIRb	SINE/MIR	1	212	(56)	1561548
889	23.6	16.3	13.7	chr17	10236861	10237401	(73020040)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	3	1564337
438	28.2	3.2	2.6	chr17	10289885	10290037	(72967404)	C	L3	LINE/CR1	(266)	3833	3680	1564461
232	25.0	7.7	8.6	chr17	10290604	10290708	(72966733)	+	MamTip2	DNA/hAT-Tip100	150	253	(52)	1564466
344	24.2	4.6	8.8	chr17	10755293	10755473	(72501968)	C	MER5B	DNA/hAT-Charlie	(5)	173	1	1565208
104	28.7	4.0	1.0	chr17	10755604	10755974	(72501467)	+	(CTCTCC)n	Simple_repeat	1	386	(0)	1565209
36	2.9	0.0	0.0	chr17	10755983	10756017	(72501424)	+	(CT)n	Simple_repeat	1	35	(0)	1565210
227	30.9	16.0	0.0	chr17	13025472	13025581	(70231860)	+	MIRb	SINE/MIR	5	135	(133)	1569064
30	41.6	3.3	3.9	chr17	13025634	13026031	(70231410)	+	(TCCCCCT)n	Simple_repeat	1	411	(0)	1569065
212	29.9	2.8	0.4	chr17	13026032	13026185	(70231256)	+	(TCTC)n	Simple_repeat	5	568	(0)	1569066
1295	20.2	5.2	11.5	chr17	13204170	13204333	(70053108)	C	Arthur1	DNA/hAT-Tip100	(387)	3560	3411	1569391
351	33.3	3.1	0.0	chr17	13204324	13204449	(70052992)	C	Arthur1B	DNA/hAT-Tip100	(1078)	147	18	1569394
17	20.6	4.0	0.0	chr17	13602592	13602642	(69654799)	+	(GTTT)n	Simple_repeat	1	53	(0)	1570039
1124	18.2	10.8	1.4	chr17	14415356	14415737	(68841704)	C	MER31-int	LTR/ERV1	(3550)	1806	1078	1571394
161	22.6	2.8	2.2	chr17	14415761	14416195	(68841246)	+	(CTTT)n	Simple_repeat	1	447	(0)	1571397
658	27.3	8.2	6.7	chr17	14541347	14541719	(68715722)	C	LTR78	LTR/ERV1	(7)	1297	919	1571627
126	15.8	2.1	4.0	chr17	14541951	14542240	(68715201)	+	(TTCCC)n	Simple_repeat	1	296	(0)	1571628
506	20.8	4.4	4.7	chr17	15493450	15493604	(67763837)	+	MLT1A0	LTR/ERVL-MaLR	63	236	(160)	1573145
79	21.0	1.1	2.1	chr17	15493606	15493791	(67763650)	+	(CTCC)n	Simple_repeat	1	188	(0)	1573146
457	23.9	16.4	0.6	chr17	15493793	15493970	(67763471)	+	MLT1A0	LTR/ERVL-MaLR	194	365	(0)	1573145
65	5.3	7.3	1.5	chr17	15502710	15502832	(67754609)	+	(TC)n	Simple_repeat	1	132	(0)	1573165
587	20.6	0.0	0.0	chr17	16320005	16320106	(66937335)	+	FLAM_A	SINE/Alu	1	102	(40)	1574689
227	27.0	8.7	6.4	chr17	16320107	16320188	(66937253)	C	SVA_E	Retroposon/SVA	(1175)	172	1	1574688
170	13.4	2.4	4.5	chr17	16320203	16320572	(66936869)	+	GA-rich	Low_complexity	1	379	(0)	1574690
968	27.7	7.2	1.3	chr17	17609267	17609646	(65647795)	+	MLT1J2	LTR/ERVL-MaLR	44	447	(1)	1576959
10236	13.3	1.6	1.2	chr17	19442425	19444001	(63813440)	+	MSTA-int	LTR/ERVL-MaLR	47	1631	(0)	1580610
829	22.6	13.8	0.4	chr17	20073045	20073288	(63184153)	C	Arthur1C	DNA/hAT-Tip100	(81)	282	1	1581889
78	25.6	4.5	1.4	chr17	20560721	20560987	(62696454)	+	(CT)n	Simple_repeat	1	279	(0)	1582681
2055	18.4	2.1	10.1	chr17	20561077	20561398	(62696043)	+	L1MB4	LINE/L1	5380	5675	(505)	1582682
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26938538	26939277	(56318164)	+	(GAATG)n	Satellite	3	736	(0)	1585994
437	12.7	3.1	0.0	chr17	26939289	26939351	(56318090)	+	AluSz6	SINE/Alu	225	289	(23)	1585995
1545	18.6	0.5	0.9	chr17	26939351	26939821	(56317620)	+	(GAATG)n	Satellite	4	474	(0)	1585996
377	19.1	1.6	0.0	chr17	26939822	26939884	(56317557)	+	AluYj4	SINE/Alu	224	287	(24)	1585997
1545	18.6	0.5	0.9	chr17	26939888	26940398	(56317043)	+	(GAATG)n	Satellite	3	514	(0)	1585998
5495	11.8	1.7	0.5	chr17	29832967	29833681	(53423760)	C	L1M1	LINE/L1	(3371)	4194	3463	1591449
144	13.7	0.0	2.0	chr17	29833682	29833931	(53423510)	+	(CCCT)n	Simple_repeat	1	250	(0)	1591451
1019	16.3	0.5	0.5	chr17	29833932	29834122	(53423319)	C	L1M1	LINE/L1	(4068)	3497	3307	1591449
378	23.6	13.6	3.3	chr17	29834135	29834318	(53423123)	+	L1ME4b	LINE/L1	45	250	(642)	1591452
2736	21.2	10.8	3.9	chr17	30400977	30401191	(52856250)	C	L1MEf	LINE/L1	(4719)	1523	1337	1592524
77	30.4	1.8	0.7	chr17	30401195	30401476	(52855965)	+	(CTGCTT)n	Simple_repeat	1	285	(0)	1592527
906	18.7	7.4	1.6	chr17	31658956	31659145	(51598296)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	173	1595037
760	17.1	8.1	0.6	chr17	31659425	31659583	(51597858)	C	MLT1A	LTR/ERVL-MaLR	(218)	172	1	1595037
5944	9.6	3.1	0.0	chr17	31675318	31676117	(51581324)	C	LTR12	LTR/ERV1	(0)	826	1	1595062
55	31.1	0.4	5.7	chr17	31676118	31676275	(51581166)	+	GA-rich	Low_complexity	18	165	(0)	1595063
2317	11.1	0.3	0.0	chr17	32238387	32238684	(51018757)	+	AluSx1	SINE/Alu	2	300	(12)	1596376
100	18.7	1.0	0.0	chr17	32238731	32238927	(51018514)	+	(CCTC)n	Simple_repeat	1	199	(0)	1596377
499	28.9	7.8	5.5	chr17	32238928	32239062	(51018379)	+	L2a	LINE/L2	3183	3335	(91)	1596369
261	30.8	3.6	12.5	chr17	32284945	32285096	(50972345)	C	MLT1K	LTR/ERVL-MaLR	(134)	461	324	1596462
41	16.8	1.1	2.3	chr17	32285115	32285201	(50972240)	+	G-rich	Low_complexity	1	88	(0)	1596463
15	11.6	6.9	0.0	chr17	36055606	36055634	(47201807)	+	GA-rich	Low_complexity	1	31	(0)	1603330
484	16.2	0.0	2.5	chr17	36055671	36055750	(47201691)	+	AluJb	SINE/Alu	160	237	(75)	1603331
449	29.9	12.7	1.8	chr17	36055799	36056084	(47201357)	+	LTR78B	LTR/ERV1	296	617	(679)	1603332
1911	17.4	0.0	0.4	chr17	37001037	37001312	(46256129)	+	AluJo	SINE/Alu	1	275	(37)	1605077
36	12.3	4.7	0.0	chr17	37001319	37001382	(46256059)	+	GA-rich	Low_complexity	1	67	(0)	1605078
56	0.0	0.0	0.0	chr17	37001406	37001455	(46255986)	+	(AGGA)n	Simple_repeat	1	50	(0)	1605079
370	26.6	3.3	2.9	chr17	37758798	37758847	(45498594)	C	Charlie7a	DNA/hAT-Charlie	(190)	82	34	1606476
12	16.1	0.0	3.3	chr17	37758998	37759027	(45498414)	+	GA-rich	Low_complexity	1	30	(0)	1606478
356	27.4	3.3	4.9	chr17	37759034	37759156	(45498285)	+	L1MEg	LINE/L1	1840	1960	(4124)	1606479
31	24.8	4.3	2.5	chr17	37759157	37759274	(45498167)	+	A-rich	Low_complexity	1	120	(0)	1606480
238	32.0	15.9	1.9	chr17	37819105	37819362	(45438079)	+	L3	LINE/CR1	3796	4096	(3)	1606606
12	11.2	6.7	0.0	chr17	37819697	37819726	(45437715)	+	(TCTCCC)n	Simple_repeat	1	32	(0)	1606607
13	12.7	0.0	0.0	chr17	37819899	37819924	(45437517)	+	(TGTTT)n	Simple_repeat	1	26	(0)	1606608
16	22.7	5.7	2.7	chr17	39197704	39197773	(44059668)	+	(CCCG)n	Simple_repeat	1	74	(0)	1609528
13	20.9	0.0	0.0	chr17	39648916	39648948	(43608493)	+	(AGAC)n	Simple_repeat	1	33	(0)	1610524
17	31.5	1.2	3.5	chr17	39649004	39649088	(43608353)	+	GA-rich	Low_complexity	1	86	(0)	1610525
1484	22.8	10.1	1.8	chr17	39649126	39649584	(43607857)	+	L1MC4a	LINE/L1	5481	5953	(1929)	1610526
12	23.3	4.4	0.0	chr17	39980700	39980744	(43276697)	+	(TCCTCCA)n	Simple_repeat	1	47	(0)	1611118
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
16	10.7	7.1	2.2	chr17	39981111	39981152	(43276289)	+	(GACGGCA)n	Simple_repeat	1	45	(0)	1611121
16	23.6	0.0	0.0	chr17	40069008	40069042	(43188399)	+	(GT)n	Simple_repeat	1	35	(0)	1611299
96	24.6	2.0	0.0	chr17	40069072	40069316	(43188125)	+	(CTCT)n	Simple_repeat	1	250	(0)	1611300
181	14.7	0.0	2.9	chr17	40124253	40124287	(43133154)	+	X9_LINE	LINE/L1	36	69	(867)	1611396
51	19.4	2.6	0.8	chr17	40124316	40124432	(43133009)	+	(TCTC)n	Simple_repeat	1	120	(0)	1611397
71	40.3	0.2	1.6	chr17	41567291	41567720	(41689721)	+	(TCCACC)n	Simple_repeat	1	431	(0)	1613833
2301	8.4	4.5	0.3	chr17	41861418	41861714	(41395727)	+	AluSx1	SINE/Alu	1	310	(2)	1614457
403	16.5	0.0	15.6	chr17	41861715	41861774	(41395667)	+	LTR49	LTR/ERV1	661	707	(0)	1614456
404	27.9	3.9	0.8	chr17	41861777	41861899	(41395542)	+	L2a	LINE/L2	1675	1801	(1618)	1614455
476	15.6	4.0	0.0	chr17	42431683	42431778	(40825663)	C	L1MB7	LINE/L1	(7)	6171	6072	1615625
2175	18.0	8.7	8.0	chr17	42431863	42432160	(40825281)	C	MER92B	LTR/ERV1	(47)	589	276	1615626
1742	8.9	0.0	0.4	chr17	42432161	42432397	(40825044)	C	AluSp	SINE/Alu	(15)	298	63	1615627
2118	12.7	0.3	2.5	chr17	42445371	42445685	(40811756)	+	AluSx1	SINE/Alu	3	310	(2)	1615672
278	23.1	7.1	0.0	chr17	42445792	42445856	(40811585)	+	L1MDa	LINE/L1	1530	1599	(5034)	1615655
2646	4.8	0.3	1.0	chr17	42445857	42446196	(40811245)	+	AluY	SINE/Alu	1	311	(0)	1615673
38	21.3	9.5	0.6	chr17	42682577	42682724	(40574717)	+	GA-rich	Low_complexity	1	162	(0)	1616146
15	19.6	0.0	0.0	chr17	42682757	42682791	(40574650)	+	(GAGCCC)n	Simple_repeat	1	35	(0)	1616147
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
1299	14.6	17.4	3.1	chr17	43309487	43309740	(39947701)	+	AluJr4	SINE/Alu	3	300	(12)	1617568
217	33.3	9.2	3.6	chr17	43309758	43309869	(39947572)	+	MIR3	SINE/MIR	27	145	(63)	1617569
1953	12.5	0.0	5.3	chr17	43310054	43310251	(39947190)	C	AluJr4	SINE/Alu	(14)	298	112	1617570
720	27.4	9.1	0.0	chr17	43563540	43563858	(39693583)	+	L1ME5	LINE/L1	5539	5897	(297)	1618110
12	17.8	6.2	5.9	chr17	44557402	44557465	(38699976)	+	(AGCGAG)n	Simple_repeat	1	68	(0)	1620208
17	22.1	0.0	2.0	chr17	44557636	44557684	(38699757)	+	G-rich	Low_complexity	1	49	(0)	1620209
15	18.9	6.8	3.2	chr17	44557691	44557715	(38699726)	+	(GCC)n	Simple_repeat	1	44	(19)	1620210
18	4.2	0.0	0.0	chr17	44557716	44557740	(38699701)	+	(CTG)n	Simple_repeat	1	25	(0)	1620211
15	18.9	6.8	3.2	chr17	44557741	44557749	(38699692)	+	(GCC)n	Simple_repeat	45	63	(0)	1620210
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
232	23.0	20.4	0.9	chr17	45270212	45270325	(37987116)	C	MIRb	SINE/MIR	(13)	255	114	1621697
13	21.7	7.5	0.0	chr17	45584880	45584932	(37672509)	+	(GGCAGC)n	Simple_repeat	1	57	(0)	1622332
2480	9.3	0.0	0.0	chr17	46061810	46062121	(37195320)	+	AluSx1	SINE/Alu	1	312	(0)	1623311
2407	8.9	0.0	0.3	chr17	46062356	46062657	(37194784)	C	AluSc5	SINE/Alu	(8)	301	1	1623312
9882	17.3	4.4	7.4	chr17	46124250	46125479	(37131962)	+	Tigger1	DNA/TcMar-Tigger	1174	2418	(0)	1623414
229	34.9	0.0	0.0	chr17	46183084	46183146	(37074295)	C	L2c	LINE/L2	(224)	3163	3101	1623526
590	16.4	9.8	0.0	chr17	46183147	46183256	(37074185)	+	FLAM_A	SINE/Alu	1	122	(20)	1623527
213	38.0	0.0	1.2	chr17	46183257	46183272	(37074169)	C	L2c	LINE/L2	(278)	3097	3082	1623526
1251	18.7	14.5	1.2	chr17	46183298	46183554	(37073887)	+	AluJb	SINE/Alu	1	297	(15)	1623528
34	18.5	3.5	4.0	chr17	46183555	46183664	(37073777)	+	GA-rich	Low_complexity	1	109	(0)	1623529
1649	13.6	13.2	0.0	chr17	46183669	46183932	(37073509)	+	AluSz6	SINE/Alu	1	304	(8)	1623530
22	17.2	1.9	1.8	chr17	46192762	46192817	(37064624)	+	(GAGCAG)n	Simple_repeat	1	56	(0)	1623544
13	20.8	10.6	0.0	chr17	46192891	46192956	(37064485)	+	G-rich	Low_complexity	1	73	(0)	1623545
17	20.2	0.0	4.1	chr17	46193000	46193048	(37064393)	+	(GGCGGA)n	Simple_repeat	1	49	(0)	1623546
17	12.4	2.7	2.6	chr17	46193329	46193365	(37064076)	+	(CGG)n	Simple_repeat	1	38	(0)	1623547
15	8.7	0.0	0.0	chr17	46193431	46193455	(37063986)	+	(GAGC)n	Simple_repeat	1	25	(0)	1623548
6357	26.6	6.9	7.0	chr17	47065564	47068369	(36189072)	C	HERVIP10FH-int	LTR/ERV1	(259)	4843	2041	1625273
1864	12.2	4.2	0.0	chr17	47094894	47095163	(36162278)	+	AluSx	SINE/Alu	1	282	(30)	1625318
26	0.0	0.0	0.0	chr17	47095164	47095188	(36162253)	+	(AATA)n	Simple_repeat	1	25	(0)	1625319
1838	18.2	0.7	1.0	chr17	47095189	47095363	(36162078)	+	AluJb	SINE/Alu	134	310	(2)	1625317
50	10.7	0.0	3.4	chr17	47095364	47095451	(36161990)	+	(GGGA)n	Simple_repeat	1	88	(0)	1625320
1486	16.4	3.3	3.6	chr17	47095459	47095761	(36161680)	+	L1M4	LINE/L1	5400	5701	(473)	1625311
323	25.0	4.7	11.1	chr17	47427644	47427850	(35829591)	C	HAL1	LINE/L1	(317)	2190	1998	1625948
242	25.0	0.0	0.0	chr17	47427867	47427930	(35829511)	+	L1MC4	LINE/L1	7979	8042	(0)	1625949
375	26.4	6.5	1.5	chr17	47947102	47947232	(35310209)	+	MLT1O	LTR/ERVL-MaLR	73	210	(332)	1627000
12	17.5	0.0	5.6	chr17	48555184	48555219	(34702222)	+	GA-rich	Low_complexity	1	36	(0)	1628090
65	12.5	4.7	0.8	chr17	48555273	48555400	(34702041)	+	GA-rich	Low_complexity	1	134	(0)	1628090
16	13.2	0.0	0.0	chr17	48555663	48555687	(34701754)	+	(C)n	Simple_repeat	1	25	(0)	1628091
29	22.1	2.9	0.0	chr17	48568599	48568667	(34688774)	+	(AC)n	Simple_repeat	1	71	(0)	1628104
19	18.0	5.8	0.0	chr17	48568728	48568779	(34688662)	+	GA-rich	Low_complexity	1	55	(0)	1628105
31	20.7	1.6	0.0	chr17	48569019	48569082	(34688359)	+	(CT)n	Simple_repeat	1	65	(0)	1628106
101	8.1	2.0	0.7	chr17	48647022	48647169	(34610272)	+	(GA)n	Simple_repeat	1	151	(0)	1628176
13	28.3	1.8	1.7	chr17	48647332	48647388	(34610053)	+	G-rich	Low_complexity	1	58	(0)	1628177
94	7.2	4.1	0.0	chr17	48728854	48728999	(34528442)	+	(TC)n	Simple_repeat	1	152	(0)	1628367
12	24.0	4.5	0.0	chr17	48729085	48729128	(34528313)	+	GA-rich	Low_complexity	1	46	(0)	1628368
922	27.4	12.4	3.9	chr17	49087642	49088074	(34169367)	+	LTR16C	LTR/ERVL	5	479	(10)	1629190
1881	12.9	11.0	13.6	chr17	49088140	49088580	(34168861)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1629191
329	37.1	5.0	4.4	chr17	49088581	49088741	(34168700)	+	HERV16-int	LTR/ERVL	87	253	(4743)	1629192
1878	16.0	0.3	1.6	chr17	49164799	49165104	(34092337)	C	AluJb	SINE/Alu	(1)	311	10	1629349
152	24.6	5.0	0.2	chr17	49165249	49165704	(34091737)	+	(TC)n	Simple_repeat	1	479	(0)	1629350
26	0.0	0.0	0.0	chr17	49230741	49230765	(34026676)	+	(GGAGCC)n	Simple_repeat	1	25	(0)	1629472
609	12.8	1.8	23.2	chr17	49388817	49389027	(33868414)	+	FRAM	SINE/Alu	1	165	(11)	1629852
15	16.3	0.0	2.8	chr17	49389403	49389438	(33868003)	+	(GGTTTT)n	Simple_repeat	1	36	(0)	1629853
239	28.4	3.8	7.3	chr17	50479430	50479539	(32777902)	+	MIRc	SINE/MIR	114	219	(43)	1631865
282	14.9	0.0	0.0	chr17	50480151	50480197	(32777244)	C	L2b	LINE/L2	(0)	3375	3329	1631866
20	20.1	1.3	7.5	chr17	50707671	50707749	(32549692)	+	(GCCCC)n	Simple_repeat	1	80	(0)	1632279
13	23.4	0.0	2.4	chr17	57987261	57987302	(25270139)	+	(CCCGG)n	Simple_repeat	1	42	(0)	1644233
800	22.9	6.1	1.1	chr17	58658800	58658987	(24598454)	C	AluJr	SINE/Alu	(5)	307	110	1645453
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
2186	10.2	3.0	1.0	chr17	58926059	58926351	(24331090)	+	AluSz	SINE/Alu	1	299	(13)	1646051
20	14.7	2.4	2.4	chr17	58926496	58926536	(24330905)	+	(TG)n	Simple_repeat	1	42	(0)	1646052
494	23.6	9.6	3.9	chr17	58926651	58926906	(24330535)	+	Charlie15b	DNA/hAT-Charlie	685	956	(105)	1646053
14	25.8	0.0	0.0	chr17	59220524	59220561	(24036880)	+	(GCC)n	Simple_repeat	1	38	(0)	1646719
1897	16.8	2.0	0.0	chr17	59283030	59283327	(23974114)	C	AluJb	SINE/Alu	(8)	304	1	1646892
2385	8.1	0.7	0.3	chr17	59283824	59284130	(23973311)	+	AluSq	SINE/Alu	1	308	(5)	1646893
1714	15.9	2.0	4.2	chr17	59550479	59550786	(23706655)	C	AluJr	SINE/Alu	(11)	301	1	1647501
305	24.0	11.3	19.5	chr17	59550787	59550903	(23706538)	C	L1ME1	LINE/L1	(5354)	1749	1649	1647492
61	1.7	1.7	0.0	chr17	59550904	59550963	(23706478)	+	(TC)n	Simple_repeat	1	61	(0)	1647502
305	24.0	11.3	19.5	chr17	59550964	59551047	(23706394)	C	L1ME1	LINE/L1	(5455)	1648	1597	1647492
2382	3.4	0.0	0.4	chr17	59551048	59551315	(23706126)	C	AluY	SINE/Alu	(16)	295	29	1647503
25	22.6	2.8	6.4	chr17	60392137	60392243	(22865198)	+	(CTC)n	Simple_repeat	1	110	(0)	1649144
4200	15.7	5.2	1.6	chr17	61749147	61749711	(21507730)	+	L1M4c	LINE/L1	5250	5847	(557)	1651535
2911	15.2	6.4	0.9	chr17	61749724	61750273	(21507168)	C	L1M3	LINE/L1	(1674)	4466	3885	1651541
259	37.0	7.6	5.5	chr17	63032069	63032325	(20225116)	C	MLT1O	LTR/ERVL-MaLR	(174)	368	106	1654145
235	31.1	1.3	0.0	chr17	63032336	63032409	(20225032)	C	MLT1O	LTR/ERVL-MaLR	(374)	168	94	1654146
249	21.9	6.4	6.4	chr17	63032489	63032566	(20224875)	C	L2b	LINE/L2	(684)	2735	2658	1654140
183	21.7	22.1	3.2	chr17	63032632	63032693	(20224748)	C	L2a	LINE/L2	(1)	3425	3349	1654147
183	33.9	12.7	0.0	chr17	63600442	63600565	(19656876)	C	MIRc	SINE/MIR	(19)	249	108	1655006
204	19.7	10.7	0.7	chr17	63600570	63600633	(19656808)	+	MIR3	SINE/MIR	91	159	(103)	1655007
14	9.2	0.0	11.4	chr17	63622483	63622535	(19634906)	+	(GGCG)n	Simple_repeat	1	46	(0)	1655052
2391	6.7	1.0	0.3	chr17	63843361	63843659	(19413782)	+	AluSq2	SINE/Alu	9	309	(4)	1655442
70	12.3	1.7	0.8	chr17	63850446	63850565	(19406876)	+	(GAGG)n	Simple_repeat	1	122	(0)	1655460
300	25.4	6.9	6.2	chr17	64743676	64743805	(18513636)	+	L1ME4a	LINE/L1	5991	6121	(3)	1657239
106	25.8	2.9	1.3	chr17	64743825	64744131	(18513310)	+	GA-rich	Low_complexity	1	316	(0)	1657240
2595	18.5	3.6	4.6	chr17	65358969	65359349	(17898092)	C	MER74A	LTR/ERVL	(0)	558	191	1658503
1744	10.9	18.8	0.3	chr17	65359350	65359653	(17897788)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	1658504
6250	13.1	2.3	2.3	chr17	65411234	65411401	(17846040)	+	L1MA5	LINE/L1	6132	6300	(0)	1658598
11587	10.8	2.3	0.8	chr17	65411403	65413058	(17844383)	C	Tigger1	DNA/TcMar-Tigger	(631)	1787	106	1658597
908	10.6	9.3	0.2	chr17	65487499	65487699	(17769742)	C	MSTB	LTR/ERVL-MaLR	(4)	461	225	1658777
560	26.1	0.1	0.1	chr17	65487702	65489026	(17768415)	+	GA-rich	Low_complexity	1	1325	(0)	1658778
1316	14.8	2.6	0.5	chr17	65489027	65489250	(17768191)	C	MSTB	LTR/ERVL-MaLR	(197)	229	1	1658777
379	26.5	7.0	3.6	chr17	66231108	66231244	(17026197)	+	L1ME2	LINE/L1	6016	6157	(7)	1659883
4104	22.7	4.3	4.9	chr17	66231561	66231876	(17025565)	+	L1MC4	LINE/L1	6460	6800	(1242)	1659884
78	25.4	2.6	5.0	chr17	68050123	68050136	(15207305)	+	(TTCC)n	Simple_repeat	1	13	(0)	1663407
27	2.7	0.0	6.8	chr17	68050137	68050180	(15207261)	+	(TCCCT)n	Simple_repeat	1	44	(0)	1663408
78	25.4	2.6	5.0	chr17	68050181	68050474	(15206967)	+	(TTCC)n	Simple_repeat	2	288	(0)	1663409
126	5.9	2.8	0.6	chr17	68352027	68352204	(14905237)	+	(GA)n	Simple_repeat	1	183	(0)	1664036
503	26.0	9.2	9.5	chr17	68352261	68352497	(14904944)	+	L1ME4a	LINE/L1	5798	6044	(80)	1664037
845	27.7	0.5	1.8	chr17	68909214	68909437	(14348004)	C	MER58A	DNA/hAT-Charlie	(2)	222	2	1664954
254	31.1	9.8	4.5	chr17	68909514	68909668	(14347773)	C	MIRb	SINE/MIR	(8)	260	97	1664955
252	35.5	8.7	1.6	chr17	69830689	69831006	(13426435)	C	L1ME2	LINE/L1	(5739)	661	319	1666371
73	4.1	0.0	0.0	chr17	69831023	69831098	(13426343)	+	(TC)n	Simple_repeat	1	76	(0)	1666372
29	10.1	1.8	3.5	chr17	69831099	69831155	(13426286)	+	(CCTC)n	Simple_repeat	1	58	(0)	1666373
468	31.2	1.6	1.1	chr17	69831245	69831435	(13426006)	C	L1ME2	LINE/L1	(6172)	228	37	1666371
57	22.9	1.1	5.0	chr17	70217681	70217857	(13039584)	+	(CTTC)n	Simple_repeat	1	179	(0)	1666969
1773	21.3	7.8	3.7	chr17	70705856	70706343	(12551098)	C	MER67D	LTR/ERV1	(4)	510	1	1667682
2186	14.8	2.8	0.3	chr17	70977862	70978213	(12279228)	C	THE1B	LTR/ERVL-MaLR	(3)	361	1	1668086
141	33.1	1.2	3.1	chr17	70978214	70978640	(12278801)	+	GA-rich	Low_complexity	144	561	(0)	1668087
592	31.1	3.4	2.6	chr17	70978686	70978949	(12278492)	+	MIRb	SINE/MIR	3	268	(0)	1668088
272	26.0	11.1	0.9	chr17	71871860	71871964	(11385477)	C	MIRc	SINE/MIR	(17)	251	135	1669444
24	14.4	0.0	0.0	chr17	72120667	72120705	(11136736)	+	(AC)n	Simple_repeat	1	39	(0)	1669832
716	18.0	0.0	9.3	chr17	72236361	72236521	(11020920)	+	AluJr4	SINE/Alu	1	146	(166)	1670039
210	11.5	0.0	0.6	chr17	72236541	72236863	(11020578)	+	(GGGA)n	Simple_repeat	1	323	(0)	1670040
54	10.8	0.0	0.0	chr17	72468162	72468243	(10789198)	+	(GAGA)n	Simple_repeat	1	82	(0)	1670433
236	20.8	0.0	1.0	chr17	73147901	73148384	(10109057)	+	(CT)n	Simple_repeat	1	484	(0)	1671742
39	2.7	0.0	0.0	chr17	73148385	73148422	(10109019)	+	(TG)n	Simple_repeat	1	38	(0)	1671743
1693	11.0	4.2	2.0	chr17	73148425	73148678	(10108763)	C	AluSx1	SINE/Alu	(11)	301	42	1671744
438	24.2	15.3	6.3	chr17	73289417	73289575	(9967866)	+	MER21C	LTR/ERVL	428	603	(335)	1672002
383	19.1	1.6	0.0	chr17	73289593	73289655	(9967786)	C	MER58A	DNA/hAT-Charlie	(160)	64	1	1672003
32	2.9	0.0	0.0	chr17	73289716	73289750	(9967691)	+	(AGGAAGGG)n	Simple_repeat	1	35	(0)	1672004
54	21.9	4.2	4.0	chr17	73289752	73289941	(9967500)	+	GA-rich	Low_complexity	1	198	(0)	1672005
112	26.8	4.2	2.5	chr17	73757787	73758212	(9499229)	+	(CCTCT)n	Simple_repeat	1	444	(0)	1672898
30	12.0	0.0	0.0	chr17	73758265	73758309	(9499132)	+	(T)n	Simple_repeat	1	45	(0)	1672899
225	24.4	1.3	7.1	chr17	74054596	74054644	(9202797)	C	MER5A	DNA/hAT-Charlie	(2)	187	144	1673410
754	23.9	4.2	1.6	chr17	74054645	74054827	(9202614)	+	MLT1B	LTR/ERVL-MaLR	1	188	(186)	1673411
143	25.2	0.3	0.3	chr17	74054828	74055062	(9202379)	+	(TCTCTC)n	Simple_repeat	1	236	(0)	1673412
2017	10.3	0.0	9.7	chr17	74055063	74055393	(9202048)	C	AluSx	SINE/Alu	(13)	299	1	1673413
355	18.0	4.8	2.6	chr17	74568410	74569350	(8688091)	+	(TG)n	Simple_repeat	1	986	(0)	1674386
399	29.7	19.9	0.7	chr17	76839931	76840367	(6417074)	+	L2b	LINE/L2	2297	2838	(581)	1678869
203	29.9	15.1	0.0	chr17	76840470	76840576	(6416865)	+	L2b	LINE/L2	3025	3150	(225)	1678869
318	22.9	1.4	0.5	chr17	76840743	76841481	(6415960)	+	(CT)n	Simple_repeat	1	749	(0)	1678870
455	30.9	16.4	3.6	chr17	76887064	76887431	(6370010)	+	L2	LINE/L2	2327	2750	(669)	1678965
89	5.2	0.0	0.0	chr17	76887432	76887532	(6369909)	+	(TCCC)n	Simple_repeat	1	101	(0)	1678967
455	30.9	16.4	3.6	chr17	76887533	76887543	(6369898)	+	L2	LINE/L2	2751	2762	(657)	1678965
2297	11.2	0.6	1.0	chr17	76887544	76887856	(6369585)	C	AluSx	SINE/Alu	(0)	312	1	1678968
188	25.9	19.6	3.9	chr17	76966602	76966806	(6290635)	C	L2c	LINE/L2	(32)	3355	3111	1679127
53	30.5	1.6	1.6	chr17	78324150	78324336	(4933105)	+	GA-rich	Low_complexity	1	190	(0)	1681651
978	18.3	0.0	3.5	chr17	78864076	78864244	(4393197)	C	AluJo	SINE/Alu	(13)	299	137	1682585
70	22.3	2.2	1.1	chr17	78864251	78864413	(4393028)	+	(CTTC)n	Simple_repeat	1	165	(0)	1682586
815	18.7	0.0	0.0	chr17	78864420	78864542	(4392899)	C	AluJr	SINE/Alu	(189)	123	1	1682587
159	10.1	1.3	0.0	chr17	79442191	79442428	(3815013)	+	(AGAG)n	Simple_repeat	1	241	(0)	1683428
719	30.9	6.1	8.0	chr17	79483283	79483782	(3773659)	+	L2a	LINE/L2	2937	3426	(0)	1683480
227	15.0	7.7	10.4	chr17	79658749	79658815	(3598626)	C	L2b	LINE/L2	(20)	3355	3291	1683715
334	29.9	11.5	8.4	chr17	79658912	79659280	(3598161)	C	MLT1I	LTR/ERVL-MaLR	(11)	400	19	1683716
58	4.0	5.2	0.0	chr17	79696418	79696494	(3560947)	+	(CT)n	Simple_repeat	1	81	(0)	1683775
4411	10.9	12.3	1.7	chr17	79696529	79697275	(3560166)	+	LTR1A2	LTR/ERV1	1	837	(0)	1683776
341	27.6	13.6	6.4	chr17	79758597	79758909	(3498532)	+	L1ME4b	LINE/L1	8	346	(546)	1683892
1648	18.1	2.4	1.7	chr17	79758914	79759206	(3498235)	+	AluJb	SINE/Alu	1	295	(17)	1683893
41	11.7	0.0	0.0	chr17	79759207	79759272	(3498169)	+	(GGGA)n	Simple_repeat	1	66	(0)	1683894
27	0.0	0.0	0.0	chr17	79759274	79759299	(3498142)	+	(AAGG)n	Simple_repeat	1	26	(0)	1683895
259	23.4	0.0	0.0	chr17	79759300	79759363	(3498078)	+	L1ME3	LINE/L1	6093	6156	(6)	1683896
19	12.1	3.2	7.7	chr17	79838874	79838936	(3418505)	+	(CCCCACC)n	Simple_repeat	1	65	(0)	1684010
20	26.3	2.0	5.0	chr17	79838906	79839004	(3418437)	+	(CCCCGCG)n	Simple_repeat	1	101	(0)	1684011
614	18.0	15.0	0.0	chr17	81002433	81002720	(2254721)	C	MSTD	LTR/ERVL-MaLR	(7)	389	1	1685761
13	12.5	5.4	2.6	chr17	81002872	81002908	(2254533)	+	(CAGCAGC)n	Simple_repeat	1	39	(0)	1685762
1478	11.5	2.8	0.5	chr17	81002937	81003144	(2254297)	C	AluJo	SINE/Alu	(13)	299	87	1685763
12	9.6	8.6	2.6	chr17	81397107	81397141	(1860300)	+	(GCGCG)n	Simple_repeat	1	38	(0)	1686228
19	17.2	0.0	0.0	chr17	81397396	81397428	(1860013)	+	A-rich	Low_complexity	1	33	(0)	1686229
377	23.1	30.5	2.6	chr17	81491897	81492090	(1765351)	+	MLT1F1	LTR/ERVL-MaLR	310	569	(0)	1686301
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
954	18.2	13.0	1.8	chr17	82672476	82672813	(584628)	+	MSTC	LTR/ERVL-MaLR	1	418	(10)	1688063
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
1340	19.3	3.5	1.6	chr18	3752189	3752494	(76620791)	C	L1MB7	LINE/L1	(13)	6171	5860	1694994
45	5.7	0.0	0.0	chr18	3752498	3752552	(76620733)	+	(CCTC)n	Simple_repeat	1	55	(0)	1694995
41	20.6	2.3	0.0	chr18	3752553	3752647	(76620638)	+	(TC)n	Simple_repeat	1	97	(0)	1694996
939	17.5	0.7	2.6	chr18	3752656	3752809	(76620476)	C	FRAM	SINE/Alu	(25)	151	1	1694997
1130	13.5	1.9	1.4	chr18	3752810	3753010	(76620275)	C	L1MB8	LINE/L1	(301)	5877	5676	1694998
200	2.8	7.2	2.7	chr18	4510685	4511029	(75862256)	+	(GTG)n	Simple_repeat	1	370	(0)	1696090
15	20.4	2.0	4.0	chr18	5943693	5943741	(74429544)	+	(GCA)n	Simple_repeat	1	50	(0)	1697910
41	11.9	0.0	0.0	chr18	8082469	8082533	(72290752)	+	(CCCT)n	Simple_repeat	1	65	(0)	1700942
678	33.6	13.4	3.9	chr18	8082534	8083620	(72289665)	+	L2a	LINE/L2	2087	3299	(127)	1700943
1861	5.5	0.0	0.0	chr18	9089916	9090133	(71283152)	C	AluY	SINE/Alu	(3)	308	91	1702439
159	20.3	2.6	4.2	chr18	10368406	10368437	(70004848)	+	G-rich	Low_complexity	1	472	(0)	1704475
124	26.1	2.8	3.0	chr18	10368438	10368865	(70004420)	+	GA-rich	Low_complexity	1	440	(0)	1704476
24738	6.2	0.3	0.9	chr18	10599605	10602698	(69770587)	C	Harlequin-int	LTR/ERV1	(1770)	5126	2053	1704758
6705	6.8	5.6	3.7	chr18	10602685	10602793	(69770492)	C	Harlequin-int	LTR/ERV1	(5957)	939	864	1704758
49	3.8	7.1	2.2	chr18	10602794	10602878	(69770407)	+	(TC)n	Simple_repeat	1	91	(0)	1704759
6705	8.4	2.9	2.0	chr18	10602879	10603735	(69769550)	C	Harlequin-int	LTR/ERV1	(6033)	863	2	1704758
292	28.4	3.7	8.7	chr18	12155670	12155895	(68217390)	C	MamGypLTR1c	LTR/Gypsy	(558)	245	31	1706980
1650	17.3	14.6	6.7	chr18	12155896	12156043	(68217242)	+	MSTB	LTR/ERVL-MaLR	1	200	(226)	1706981
32	3.2	0.0	0.0	chr18	12156044	12156075	(68217210)	+	(TC)n	Simple_repeat	1	32	(0)	1706982
1650	17.3	14.6	6.7	chr18	12156076	12156316	(68216969)	+	MSTB	LTR/ERVL-MaLR	201	426	(0)	1706981
292	28.4	3.7	8.7	chr18	12156317	12156343	(68216942)	C	MamGypLTR1c	LTR/Gypsy	(773)	30	5	1706980
378	19.5	0.0	12.8	chr18	12271228	12271368	(68101917)	+	MLT1D	LTR/ERVL-MaLR	93	215	(290)	1707115
246	18.2	0.0	1.8	chr18	12271503	12271558	(68101727)	+	MLT1D	LTR/ERVL-MaLR	443	497	(8)	1707115
180	31.7	4.7	0.0	chr18	12946944	12947044	(67426241)	+	L2	LINE/L2	307	412	(3007)	1708432
203	27.1	10.3	0.0	chr18	21747886	21747955	(58625330)	+	L2c	LINE/L2	3270	3347	(40)	1713232
336	19.0	4.5	2.2	chr18	21748033	21748175	(58625110)	C	MIRc	SINE/MIR	(100)	168	19	1713233
49	11.3	4.5	0.0	chr18	21748345	21748433	(58624852)	+	(CTCC)n	Simple_repeat	1	93	(0)	1713234
1878	18.9	1.7	0.7	chr18	21748434	21748730	(58624555)	C	AluJb	SINE/Alu	(12)	300	1	1713235
120	29.2	3.0	0.0	chr18	22204077	22204391	(58168894)	+	(TCTC)n	Simple_repeat	1	370	(0)	1714125
23	15.9	0.0	0.0	chr18	22204392	22204435	(58168850)	+	(CTCCC)n	Simple_repeat	1	44	(0)	1714126
2058	13.3	0.6	4.6	chr18	23277136	23277505	(57095780)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1715914
848	19.8	18.6	2.5	chr18	23277506	23277590	(57095695)	C	MLT1H	LTR/ERVL-MaLR	(219)	330	246	1715913
792	20.4	11.0	6.3	chr18	23277595	23277917	(57095368)	C	MER31B	LTR/ERV1	(4)	510	1	1715915
705	25.0	13.2	1.0	chr18	23277920	23278125	(57095160)	C	MLT1H	LTR/ERVL-MaLR	(306)	243	9	1715913
20	10.1	0.0	0.0	chr18	23437922	23437953	(56935332)	+	(GCA)n	Simple_repeat	1	32	(0)	1716196
1572	22.6	7.5	2.4	chr18	23468748	23469265	(56904020)	C	MLT1E1A	LTR/ERVL-MaLR	(2)	678	35	1716267
79	10.0	4.5	0.0	chr18	23469305	23469459	(56903826)	+	(CT)n	Simple_repeat	1	162	(0)	1716268
2196	11.5	0.0	0.0	chr18	23469461	23469783	(56903502)	C	AluSg	SINE/Alu	(0)	310	3	1716269
1194	27.5	8.9	2.5	chr18	24819558	24819932	(55553353)	C	Plat_L3	LINE/CR1	(1858)	1728	1321	1718515
32	0.0	0.0	0.0	chr18	24819933	24819962	(55553323)	+	(CTCC)n	Simple_repeat	1	30	(0)	1718516
1194	27.5	8.9	2.5	chr18	24819963	24820186	(55553099)	C	Plat_L3	LINE/CR1	(2266)	1320	1087	1718515
1577	12.6	11.2	0.0	chr18	25033258	25033496	(55339789)	+	AluSg	SINE/Alu	1	269	(41)	1718847
267	10.5	0.8	0.0	chr18	25033497	25033886	(55339399)	+	(AG)n	Simple_repeat	1	393	(0)	1718848
278	25.0	15.0	0.0	chr18	25033967	25034074	(55339211)	+	MIRb	SINE/MIR	120	246	(22)	1718849
1397	29.1	4.7	6.6	chr18	25307574	25307919	(55065366)	+	MLT1F	LTR/ERVL-MaLR	1	329	(219)	1719157
887	22.4	2.2	0.0	chr18	25393075	25393293	(54979992)	+	L1MEc	LINE/L1	37	260	(6140)	1719273
992	21.9	3.8	0.4	chr18	25393730	25393986	(54979299)	+	L1MEc	LINE/L1	228	493	(5907)	1719273
35833	7.4	1.1	0.5	chr18	26233679	26238550	(54134735)	C	HERV9-int	LTR/ERV1	(2877)	5559	547	1720587
10271	11.5	3.4	4.2	chr18	26623704	26625296	(53747989)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	1721235
90	25.9	2.1	2.8	chr18	27887476	27887759	(52485526)	+	(CTTC)n	Simple_repeat	1	290	(0)	1723023
257	25.2	5.1	7.6	chr18	27887805	27888007	(52485278)	+	MIRb	SINE/MIR	2	196	(12)	1723024
1801	15.3	0.0	8.0	chr18	30369106	30369419	(50003866)	+	AluJb	SINE/Alu	1	289	(23)	1726241
1803	21.4	2.1	12.8	chr18	30369420	30369595	(50003690)	+	MER67D	LTR/ERV1	379	510	(4)	1726239
885	29.1	9.8	9.1	chr18	30369596	30369946	(50003339)	C	HAL1	LINE/L1	(1063)	1444	1084	1726238
166	21.7	4.0	3.3	chr18	30491763	30492286	(49880999)	+	A-rich	Low_complexity	1	545	(0)	1726418
2072	30.1	11.1	1.1	chr18	30492288	30493069	(49880216)	C	FordPrefect	DNA/hAT-Tip100	(325)	1358	490	1726417
2629	5.3	0.3	0.0	chr18	31111786	31112085	(49261200)	+	AluY	SINE/Alu	1	301	(10)	1727219
1247	22.8	3.2	2.3	chr18	31112086	31112440	(49260845)	+	MLT1D	LTR/ERVL-MaLR	182	627	(0)	1727218
12006	15.1	2.7	1.7	chr18	31216599	31218752	(49154533)	+	L1PBa	LINE/L1	258	2271	(4592)	1727388
78	19.2	7.0	0.4	chr18	31360658	31360870	(49012415)	+	(TC)n	Simple_repeat	1	228	(0)	1727578
1113	19.9	1.4	0.7	chr18	31613539	31613946	(48759339)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	5	1727941
417	23.9	1.8	2.7	chr18	31613961	31614072	(48759213)	C	L2c	LINE/L2	(0)	3387	3277	1727942
83	23.0	2.3	4.4	chr18	31614075	31614339	(48758946)	+	GA-rich	Low_complexity	1	271	(0)	1727943
300	38.4	5.7	2.1	chr18	31614349	31614585	(48758700)	C	L2c	LINE/L2	(165)	3222	2977	1727942
285	30.9	12.7	3.8	chr18	32394785	32394969	(47978316)	+	MIRb	SINE/MIR	29	232	(36)	1729301
44	19.8	1.0	1.0	chr18	33429296	33429392	(46943893)	+	GA-rich	Low_complexity	1	98	(0)	1730713
264	39.0	4.4	0.5	chr18	33686902	33687097	(46686188)	C	L2c	LINE/L2	(632)	2787	2584	1731032
2092	17.4	7.5	2.1	chr18	34758362	34758826	(45614459)	C	MER67D	LTR/ERV1	(0)	514	23	1732369
2077	13.5	0.3	0.7	chr18	35830502	35830804	(44542481)	+	AluSz	SINE/Alu	2	303	(9)	1733881
74	14.8	0.0	0.0	chr18	35830805	35830953	(44542332)	+	(GAGAGA)n	Simple_repeat	1	149	(0)	1733882
1571	20.6	9.7	8.7	chr18	35830956	35831392	(44541893)	+	LTR8	LTR/ERV1	248	689	(2)	1733880
53	17.1	0.0	3.5	chr18	36380429	36380543	(43992742)	+	(CTCC)n	Simple_repeat	1	115	(0)	1734721
66	14.0	1.4	3.6	chr18	36380528	36380665	(43992620)	+	(TTTTC)n	Simple_repeat	1	140	(0)	1734722
1847	14.0	4.4	0.3	chr18	36826034	36826319	(43546966)	C	AluJr4	SINE/Alu	(9)	303	6	1735259
4388	16.7	9.5	12.1	chr18	36826320	36826404	(43546881)	C	L1MB8	LINE/L1	(1732)	4414	4252	1735257
44	0.0	0.0	0.0	chr18	36826405	36826442	(43546843)	+	(TG)n	Simple_repeat	1	38	(0)	1735260
4388	16.7	9.5	12.1	chr18	36826443	36826606	(43546679)	C	L1MB8	LINE/L1	(1895)	4251	4083	1735257
343	14.6	0.0	0.0	chr18	36826608	36826662	(43546623)	+	MER68B	LTR/ERVL	3	57	(507)	1735261
556	21.9	2.4	0.2	chr18	36826663	36826786	(43546499)	+	MER68	LTR/ERVL	435	564	(0)	1735262
1242	12.6	4.5	5.3	chr18	36826789	36827032	(43546253)	C	L1M4	LINE/L1	(2063)	4083	3842	1735263
228	14.3	13.6	0.0	chr18	36859382	36859451	(43513834)	C	L1MEg	LINE/L1	(2761)	3385	3305	1735302
50	26.5	0.0	0.8	chr18	36859473	36859619	(43513666)	+	(TCCC)n	Simple_repeat	1	145	(0)	1735303
844	18.5	0.0	0.0	chr18	36859620	36859749	(43513536)	C	FLAM_C	SINE/Alu	(13)	130	1	1735304
16	16.5	0.0	0.0	chr18	36859781	36859807	(43513478)	+	(T)n	Simple_repeat	1	27	(0)	1735305
849	26.8	11.8	2.9	chr18	36859821	36860442	(43512843)	C	L1MEg	LINE/L1	(3012)	3134	2450	1735302
486	33.3	13.7	2.6	chr18	37122118	37122838	(43250447)	C	L2	LINE/L2	(1217)	2202	1390	1735631
479	28.2	11.1	2.8	chr18	37122975	37123156	(43250129)	+	MIRb	SINE/MIR	7	205	(63)	1735632
103	20.9	3.0	1.8	chr18	37565666	37565932	(42807353)	+	(TC)n	Simple_repeat	1	275	(0)	1736226
39	4.7	0.0	0.0	chr18	37565945	37565989	(42807296)	+	(T)n	Simple_repeat	1	45	(0)	1736227
2639	24.9	6.7	7.3	chr18	37920655	37921165	(42452120)	+	L1MD2	LINE/L1	4185	4672	(1872)	1736693
2223	10.3	0.4	0.0	chr18	37921166	37921487	(42451798)	C	AluSg	SINE/Alu	(0)	310	1	1736694
1629	19.8	5.8	0.0	chr18	38565247	38565570	(41807715)	C	MER2	DNA/TcMar-Tigger	(0)	345	2	1737558
220	35.5	8.9	4.2	chr18	38565571	38565624	(41807661)	+	MIRb	SINE/MIR	203	257	(11)	1737557
17	4.3	0.0	0.0	chr18	38565638	38565661	(41807624)	+	(GCTT)n	Simple_repeat	1	24	(0)	1737559
444	32.2	17.5	1.0	chr18	40890521	40890812	(39482473)	C	L2a	LINE/L2	(0)	3426	3079	1740635
27	6.0	0.0	0.0	chr18	40890813	40890847	(39482438)	+	(AGAC)n	Simple_repeat	1	35	(0)	1740636
598	37.0	7.6	4.0	chr18	40890848	40891353	(39481932)	C	L2a	LINE/L2	(354)	3065	2540	1740635
177	19.6	5.8	1.9	chr18	47458411	47458910	(32914375)	+	GA-rich	Low_complexity	1	529	(0)	1750233
1193	16.2	20.1	4.1	chr18	47595652	47596034	(32777251)	C	MER31B	LTR/ERV1	(0)	485	12	1750489
57	27.0	5.1	4.1	chr18	47721398	47721437	(32651848)	+	GA-rich	Low_complexity	1	235	(108)	1750690
19	41.6	2.5	5.2	chr18	47721438	47721721	(32651564)	+	A-rich	Low_complexity	1	291	(0)	1750691
57	27.0	5.1	4.1	chr18	47721722	47721737	(32651548)	+	GA-rich	Low_complexity	236	343	(0)	1750690
2035	15.3	12.9	2.4	chr18	48413221	48413634	(31959651)	+	MER31B	LTR/ERV1	1	464	(2)	1751869
337	34.9	3.1	5.3	chr18	51012257	51012519	(29360766)	C	MLT1K	LTR/ERVL-MaLR	(6)	589	333	1756203
626	22.2	24.7	0.5	chr18	51042027	51042234	(29331051)	+	MER20B	DNA/hAT-Charlie	2	276	(507)	1756266
17	23.7	2.9	2.8	chr18	51042255	51042287	(29330998)	+	(TTTC)n	Simple_repeat	1	31	(0)	1756267
47	4.0	0.0	0.0	chr18	51042288	51042339	(29330946)	+	(CCTC)n	Simple_repeat	1	52	(0)	1756268
17	23.7	2.9	2.8	chr18	51042340	51042374	(29330911)	+	(TTTC)n	Simple_repeat	4	40	(0)	1756269
17	7.8	0.0	0.0	chr18	51042368	51042394	(29330891)	+	(CCTC)n	Simple_repeat	1	27	(0)	1756270
1705	14.4	0.4	8.6	chr18	51042403	51042693	(29330592)	C	AluJb	SINE/Alu	(43)	269	3	1756271
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
226	10.5	4.2	0.0	chr18	53861206	53861583	(26511702)	+	(AGGG)n	Simple_repeat	1	394	(0)	1760369
1517	18.2	2.5	0.4	chr18	54394044	54394317	(25978968)	C	AluJo	SINE/Alu	(17)	295	16	1761164
34	18.2	1.2	3.6	chr18	54394329	54394411	(25978874)	+	(TTTC)n	Simple_repeat	1	84	(0)	1761165
68	14.7	0.0	0.8	chr18	54394402	54394519	(25978766)	+	(CTCC)n	Simple_repeat	1	118	(0)	1761166
2013	9.8	3.3	0.0	chr18	54394520	54394783	(25978502)	C	AluSz6	SINE/Alu	(19)	293	21	1761167
31	11.5	0.0	0.0	chr18	55585862	55585908	(24787377)	+	(CT)n	Simple_repeat	1	47	(0)	1762863
30	5.3	0.0	0.0	chr18	55586114	55586153	(24787132)	+	(GAG)n	Simple_repeat	1	40	(0)	1762864
87	0.0	0.0	0.0	chr18	55586154	55586229	(24787056)	+	(AGC)n	Simple_repeat	1	76	(0)	1762865
200	22.6	4.6	1.6	chr18	55586506	55586568	(24786717)	+	Tigger19a	DNA/TcMar-Tigger	132	196	(127)	1762866
340	18.8	1.4	1.4	chr18	56650949	56651018	(23722267)	+	MLT1N2	LTR/ERVL-MaLR	7	76	(486)	1764440
2126	13.5	2.9	0.0	chr18	57656374	57656676	(22716609)	C	AluSx	SINE/Alu	(0)	312	1	1765928
274	25.8	11.0	8.8	chr18	57656824	57656982	(22716303)	+	MLT1O	LTR/ERVL-MaLR	368	528	(67)	1765926
1000	12.7	0.0	0.0	chr18	57656983	57657124	(22716161)	C	L1PA8A	LINE/L1	(1)	6130	5989	1765929
2333	10.9	0.3	0.0	chr18	57844537	57844848	(22528437)	+	AluSp	SINE/Alu	1	313	(0)	1766296
256	32.0	4.8	1.0	chr18	57844876	57844976	(22528309)	+	MLT1O	LTR/ERVL-MaLR	103	207	(335)	1766297
51	2.1	0.0	0.0	chr18	57845022	57845069	(22528216)	+	(GA)n	Simple_repeat	1	48	(0)	1766298
228	26.3	8.4	0.0	chr18	57845108	57845183	(22528102)	+	MLT1O	LTR/ERVL-MaLR	433	515	(27)	1766297
929	29.9	13.6	6.0	chr18	57987766	57987812	(22385473)	C	HAL1ME	LINE/L1	(128)	2337	2297	1766586
2561	14.1	15.0	1.4	chr18	57987813	57988294	(22384991)	C	MER89	LTR/ERV1	(0)	559	1	1766587
67	23.0	2.0	0.0	chr18	59547027	59547177	(20826108)	+	GA-rich	Low_complexity	1	154	(0)	1769112
552	8.6	0.0	0.0	chr18	59547178	59547247	(20826038)	+	AluSx	SINE/Alu	6	75	(237)	1769113
62	20.0	2.2	0.7	chr18	61829477	61829615	(18543670)	+	GA-rich	Low_complexity	1	142	(0)	1772520
18	6.7	0.0	5.7	chr18	61974000	61974034	(18399251)	+	(AACAA)n	Simple_repeat	1	35	(0)	1772735
14	26.4	3.7	0.0	chr18	61974035	61974051	(18399234)	+	A-rich	Low_complexity	3	56	(0)	1772736
1350	23.8	5.9	5.4	chr18	65837194	65837728	(14535557)	C	MER67C	LTR/ERV1	(0)	514	1	1778317
352	35.9	1.3	0.6	chr18	67387745	67387901	(12985384)	C	LTR85a	LTR/Gypsy?	(8)	694	537	1780395
19	22.4	2.0	0.0	chr18	67387979	67388027	(12985258)	+	(TCCC)n	Simple_repeat	1	50	(0)	1780396
292	27.1	16.2	0.0	chr18	67388055	67388220	(12985065)	C	L1M5	LINE/L1	(3127)	3019	2822	1780397
99	16.9	0.5	1.5	chr18	69416060	69416253	(10957032)	+	GA-rich	Low_complexity	1	195	(0)	1783163
559	29.8	5.6	4.1	chr18	69838496	69838740	(10534545)	C	MIR	SINE/MIR	(2)	260	12	1783743
28	30.3	0.3	11.0	chr18	69839094	69839427	(10533858)	+	(CCTCC)n	Simple_repeat	1	335	(0)	1783744
275	29.4	3.2	6.3	chr18	70356364	70356490	(10016795)	C	MER89	LTR/ERV1	(37)	522	400	1784449
38	21.0	4.3	0.0	chr18	74531915	74532008	(5841277)	+	(TC)n	Simple_repeat	1	98	(0)	1790007
75	26.7	3.6	2.4	chr18	74579072	74579181	(5794104)	+	(CTCC)n	Simple_repeat	1	112	(0)	1790079
45	4.1	0.0	0.0	chr18	74579182	74579231	(5794054)	+	(TCCCT)n	Simple_repeat	1	50	(0)	1790080
75	26.7	3.6	2.4	chr18	74579232	74579399	(5793886)	+	(CTCC)n	Simple_repeat	1	169	(0)	1790081
914	9.0	0.0	3.7	chr18	75917071	75917204	(4456081)	+	FLAM_C	SINE/Alu	2	130	(13)	1791545
80	10.9	6.0	0.6	chr18	75917364	75917514	(4455771)	+	(CT)n	Simple_repeat	1	160	(0)	1791546
105	26.1	2.1	0.7	chr18	76212735	76213020	(4160265)	+	(TC)n	Simple_repeat	1	292	(0)	1791913
154	23.9	3.0	3.2	chr18	76738853	76739343	(3633942)	+	(TCCT)n	Simple_repeat	1	506	(0)	1792554
499	18.7	3.5	0.9	chr18	76739469	76739581	(3633704)	C	MER5A1	DNA/hAT-Charlie	(0)	166	51	1792555
226	16.1	3.4	1.2	chr18	78229433	78229901	(2143384)	+	(CCTC)n	Simple_repeat	1	485	(0)	1794388
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
123	27.8	0.6	0.0	chr18	79508578	79508914	(864371)	+	(CTCT)n	Simple_repeat	1	339	(0)	1795535
395	25.2	3.9	3.1	chr18	79647047	79647173	(726112)	C	L1MD	LINE/L1	(1982)	4164	4037	1795642
160	12.3	1.1	1.8	chr18	79647184	79647457	(725828)	+	G-rich	Low_complexity	1	277	(0)	1795643
1699	21.6	7.6	5.4	chr18	79647475	79648106	(725179)	+	L1M4	LINE/L1	4181	4827	(1319)	1795640
2071	5.8	1.5	3.2	chr18	79968904	79969180	(404105)	+	AluY	SINE/Alu	2	273	(38)	1795954
33	0.0	0.0	5.0	chr18	79969186	79969225	(404060)	+	(GAAA)n	Simple_repeat	1	40	(0)	1795955
29	0.0	7.1	0.0	chr18	79969227	79969259	(404026)	+	(GA)n	Simple_repeat	1	36	(0)	1795956
42	0.0	0.0	0.0	chr18	79969260	79969298	(403987)	+	(GAGGGAGG)n	Simple_repeat	1	39	(0)	1795957
87	0.0	2.3	1.1	chr18	79969307	79969394	(403891)	+	(AGAA)n	Simple_repeat	1	90	(0)	1795958
2431	7.0	0.0	1.3	chr19	771058	771372	(57846244)	+	AluY	SINE/Alu	1	311	(0)	1797566
317	29.8	5.3	0.9	chr19	771406	771622	(57845994)	+	L2	LINE/L2	2783	3009	(410)	1797567
236	30.5	4.5	2.1	chr19	871629	871739	(57745877)	C	L2a	LINE/L2	(27)	3399	3264	1797796
86	6.8	0.0	7.4	chr19	871755	871916	(57745700)	+	(GGGAGAG)n	Simple_repeat	1	162	(0)	1797797
2024	16.1	2.5	4.6	chr19	1085091	1085420	(57532196)	C	THE1B	LTR/ERVL-MaLR	(35)	329	1	1798200
12	7.1	2.9	8.3	chr19	1677907	1677941	(56939675)	+	GA-rich	Low_complexity	1	36	(0)	1799267
231	24.7	2.4	0.9	chr19	1678118	1678756	(56938860)	+	(TC)n	Simple_repeat	1	654	(0)	1799268
12	33.8	4.4	2.5	chr19	2350419	2350531	(56267085)	+	(CACACT)n	Simple_repeat	1	118	(0)	1800590
678	30.9	4.3	0.7	chr19	2350544	2350851	(56266765)	+	MER2	DNA/TcMar-Tigger	1	329	(7)	1800591
400	29.0	4.2	4.0	chr19	2507173	2507369	(56110247)	+	MIRc	SINE/MIR	22	207	(61)	1800969
17	40.5	3.8	1.5	chr19	2507518	2507546	(56110070)	+	(CCCTCC)n	Simple_repeat	1	99	(38)	1800970
47	19.2	2.1	0.0	chr19	2507547	2507640	(56109976)	+	(TC)n	Simple_repeat	1	96	(0)	1800971
17	40.5	3.8	1.5	chr19	2507641	2507649	(56109967)	+	(CCCTCC)n	Simple_repeat	100	137	(0)	1800970
2355	9.2	1.0	0.0	chr19	2507652	2507957	(56109659)	C	AluY	SINE/Alu	(2)	309	1	1800972
272	20.0	2.2	1.6	chr19	2639657	2640277	(55977339)	+	G-rich	Low_complexity	1	635	(0)	1801312
2341	10.1	1.3	0.0	chr19	2695877	2696184	(55921432)	+	AluSx	SINE/Alu	1	312	(0)	1801469
132	12.8	2.4	4.7	chr19	2696185	2696453	(55921163)	+	A-rich	Low_complexity	23	282	(0)	1801470
199	17.1	2.4	4.7	chr19	2878253	2878295	(55739321)	C	OldhAT1	DNA/hAT-Ac	(1371)	1477	1436	1801835
2451	4.7	1.0	3.0	chr19	2878389	2878688	(55738928)	+	AluY	SINE/Alu	1	294	(17)	1801836
42	30.4	5.0	1.3	chr19	3366345	3366566	(55251050)	+	G-rich	Low_complexity	1	233	(0)	1803067
20	26.2	1.5	2.9	chr19	3370333	3370399	(55247217)	+	(CT)n	Simple_repeat	1	68	(0)	1803080
123	21.5	2.8	0.0	chr19	3370477	3370763	(55246853)	+	(TCTC)n	Simple_repeat	1	295	(0)	1803081
2405	6.6	2.9	0.7	chr19	3575669	3575971	(55041645)	+	AluSx1	SINE/Alu	1	310	(2)	1803568
27	27.9	0.0	2.4	chr19	4702790	4702872	(53914744)	+	GA-rich	Low_complexity	1	83	(0)	1806224
404	27.4	3.9	2.8	chr19	4702895	4703074	(53914542)	C	MER20	DNA/hAT-Charlie	(0)	219	38	1806225
379	26.0	0.0	2.9	chr19	4786226	4786328	(53831288)	C	MER63D	DNA/hAT-Blackjack	(956)	105	6	1806466
32	0.0	5.4	0.0	chr19	4786346	4786382	(53831234)	+	(TGTTT)n	Simple_repeat	1	39	(0)	1806467
506	7.6	2.9	0.0	chr19	4786383	4786448	(53831168)	C	AluSx3	SINE/Alu	(30)	281	214	1806468
618	30.6	0.0	7.3	chr19	4786794	4786888	(53830728)	C	MER63C	DNA/hAT-Blackjack	(550)	380	288	1806469
2272	12.2	0.0	0.0	chr19	4786889	4787191	(53830425)	+	AluSc	SINE/Alu	1	303	(6)	1806470
1975	13.6	0.0	0.0	chr19	5501711	5501983	(53115633)	+	AluSz	SINE/Alu	1	273	(39)	1808168
95	19.5	2.3	1.4	chr19	5501989	5502202	(53115414)	+	A-rich	Low_complexity	1	219	(0)	1808169
1202	19.0	5.2	0.0	chr19	5502203	5502439	(53115177)	+	MLT1F1	LTR/ERVL-MaLR	320	569	(0)	1808167
915	27.2	7.0	1.8	chr19	5502440	5502709	(53114907)	C	MLT1I	LTR/ERVL-MaLR	(45)	366	81	1808170
1772	15.6	1.0	5.7	chr19	5817055	5817368	(52800248)	+	AluJo	SINE/Alu	1	299	(13)	1808921
89	24.8	1.8	3.8	chr19	5817370	5817653	(52799963)	+	GA-rich	Low_complexity	1	289	(0)	1808922
247	25.4	12.9	1.6	chr19	6118888	6119011	(52498605)	C	MIR	SINE/MIR	(3)	259	120	1809458
1124	16.8	3.0	1.0	chr19	6119013	6119210	(52498406)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	347	1809459
146	20.8	2.3	4.9	chr19	6119220	6119486	(52498130)	+	(CTTC)n	Simple_repeat	1	258	(0)	1809460
1850	18.6	0.3	0.3	chr19	6119487	6119781	(52497835)	C	AluJb	SINE/Alu	(17)	295	1	1809461
2090	13.9	0.7	0.0	chr19	6589380	6589689	(52027927)	C	AluSx1	SINE/Alu	(0)	312	1	1810659
174	31.0	3.4	0.7	chr19	6589690	6590075	(52027541)	+	(CT)n	Simple_repeat	2	396	(0)	1810660
50	15.2	1.1	0.0	chr19	6636358	6636447	(51981169)	+	(CTCC)n	Simple_repeat	1	91	(0)	1810771
28	3.3	0.0	0.0	chr19	6636451	6636481	(51981135)	+	(TTCC)n	Simple_repeat	1	31	(0)	1810772
2648	4.3	0.0	0.0	chr19	6636485	6636783	(51980833)	C	AluY	SINE/Alu	(12)	299	1	1810773
732	25.1	6.3	1.0	chr19	7104273	7104497	(51513119)	C	LTR16	LTR/ERVL	(220)	231	1	1812006
2276	9.5	0.0	0.0	chr19	7385492	7385775	(51231841)	C	AluSx1	SINE/Alu	(28)	284	1	1812810
1020	18.8	0.0	6.1	chr19	7385800	7385823	(51231793)	C	AluJr	SINE/Alu	(19)	293	271	1812811
142	10.9	0.5	0.0	chr19	7385824	7386046	(51231570)	+	(TC)n	Simple_repeat	1	224	(0)	1812812
1020	18.8	0.0	6.1	chr19	7386047	7386234	(51231382)	C	AluJr	SINE/Alu	(42)	270	94	1812811
2037	15.7	0.0	2.2	chr19	7451397	7451715	(51165901)	C	AluJo	SINE/Alu	(0)	312	1	1812975
1506	20.3	2.2	0.0	chr19	7494663	7494972	(51122644)	+	MER90a	LTR/ERV1	30	346	(268)	1813057
99	13.3	1.6	2.1	chr19	7494973	7495157	(51122459)	+	(TTCC)n	Simple_repeat	1	188	(0)	1813058
39	11.9	0.0	1.5	chr19	7495252	7495318	(51122298)	+	(TCCC)n	Simple_repeat	1	67	(0)	1813059
1910	14.5	1.3	3.5	chr19	7495378	7495688	(51121928)	C	AluJr	SINE/Alu	(8)	304	1	1813060
2015	13.5	0.0	4.9	chr19	8561037	8561183	(50056433)	C	AluJo	SINE/Alu	(167)	145	1	1815586
122	23.6	1.1	4.6	chr19	8561353	8561705	(50055911)	+	(CCTT)n	Simple_repeat	1	341	(0)	1815588
2403	8.0	0.0	0.3	chr19	9607871	9608170	(49009446)	C	AluY	SINE/Alu	(12)	299	1	1817753
40	17.9	6.5	1.7	chr19	9608210	9608317	(49009299)	+	GA-rich	Low_complexity	1	115	(0)	1817754
569	24.9	1.7	14.2	chr19	9608339	9608535	(49009081)	+	MLT1B	LTR/ERVL-MaLR	208	379	(11)	1817752
1639	6.4	0.0	1.8	chr19	9826939	9827157	(48790459)	+	AluSx1	SINE/Alu	87	301	(11)	1818217
1103	14.0	1.1	0.0	chr19	9827158	9827336	(48790280)	+	MER51D	LTR/ERV1	477	657	(0)	1818214
484	18.2	1.4	1.4	chr19	10388821	10388935	(48228681)	+	FLAM_C	SINE/Alu	21	131	(2)	1819620
1524	11.7	16.3	5.8	chr19	11693452	11693854	(46923762)	C	MER4B	LTR/ERV1	(45)	565	121	1822950
281	17.6	1.9	0.0	chr19	11693858	11693908	(46923708)	+	THE1D	LTR/ERVL-MaLR	1	52	(329)	1822952
1503	14.5	6.8	7.3	chr19	11693948	11694290	(46923326)	+	THE1D	LTR/ERVL-MaLR	41	381	(0)	1822952
658	14.8	2.5	0.9	chr19	11694293	11694408	(46923208)	C	MER4B	LTR/ERV1	(490)	120	3	1822950
635	25.7	4.6	0.5	chr19	12640510	12640696	(45976920)	+	AluJr	SINE/Alu	118	312	(0)	1824903
35	11.5	4.5	0.0	chr19	12640712	12640778	(45976838)	+	GA-rich	Low_complexity	1	70	(0)	1824904
2415	8.8	0.0	1.3	chr19	12640803	12641119	(45976497)	+	AluSp	SINE/Alu	1	313	(0)	1824905
411	32.7	4.6	2.3	chr19	13255442	13255672	(45361944)	C	MIRb	SINE/MIR	(8)	260	15	1826265
133	19.7	2.2	2.2	chr19	13255675	13255989	(45361627)	+	(TCCT)n	Simple_repeat	1	322	(0)	1826266
2059	13.0	1.6	2.6	chr19	13255990	13256297	(45361319)	C	AluJo	SINE/Alu	(7)	305	1	1826267
269	19.7	1.6	1.6	chr19	13706210	13706271	(44911345)	+	MLT1J2	LTR/ERVL-MaLR	67	128	(320)	1827554
245	30.4	15.8	0.0	chr19	13706387	13706498	(44911118)	+	MLT1J2	LTR/ERVL-MaLR	283	415	(29)	1827554
755	24.4	0.0	0.0	chr19	13823838	13824005	(44793611)	C	MLT1B	LTR/ERVL-MaLR	(8)	382	215	1827903
67	15.6	6.2	1.2	chr19	13824031	13824190	(44793426)	+	GA-rich	Low_complexity	1	170	(0)	1827904
251	24.7	0.0	1.3	chr19	13824200	13824277	(44793339)	C	MLT1B	LTR/ERVL-MaLR	(203)	171	95	1827903
899	6.4	0.0	20.5	chr19	13824280	13824450	(44793166)	+	AluSz	SINE/Alu	1	136	(176)	1827905
13	20.4	3.6	5.2	chr19	14248487	14248542	(44369074)	+	(GCCCCCA)n	Simple_repeat	1	58	(0)	1828948
36	25.6	2.7	3.9	chr19	14248619	14248767	(44368849)	+	(CCCT)n	Simple_repeat	1	153	(0)	1828949
459	27.3	3.6	1.0	chr19	14256256	14256392	(44361224)	+	MLT1G	LTR/ERVL-MaLR	59	234	(345)	1828973
42	28.0	6.1	0.0	chr19	14256393	14256556	(44361060)	+	(CTCT)n	Simple_repeat	1	174	(0)	1828974
20	16.8	0.0	0.0	chr19	14256539	14256578	(44361038)	+	(CTTG)n	Simple_repeat	1	40	(0)	1828975
1222	15.4	4.2	12.3	chr19	14256579	14256747	(44360869)	C	AluJr	SINE/Alu	(40)	272	103	1828976
302	23.9	0.0	0.0	chr19	14274528	14274594	(44343022)	+	MER58C	DNA/hAT-Charlie	149	215	(0)	1829029
1823	14.4	10.5	0.9	chr19	14274662	14274832	(44342784)	C	THE1D	LTR/ERVL-MaLR	(0)	381	207	1829030
107	0.0	1.1	0.0	chr19	14274833	14274926	(44342690)	+	(GA)n	Simple_repeat	1	95	(0)	1829031
1823	14.4	10.5	0.9	chr19	14274927	14275098	(44342518)	C	THE1D	LTR/ERVL-MaLR	(175)	206	2	1829030
200	26.1	12.0	1.1	chr19	14275107	14275195	(44342421)	+	MIRc	SINE/MIR	114	213	(55)	1829032
130	28.3	3.7	1.0	chr19	14384673	14384958	(44232658)	+	(TC)n	Simple_repeat	1	333	(15)	1829366
21	16.3	0.0	0.0	chr19	14384959	14384997	(44232619)	+	(T)n	Simple_repeat	1	39	(0)	1829367
130	28.3	3.7	1.0	chr19	14384998	14385008	(44232608)	+	(TC)n	Simple_repeat	334	348	(0)	1829366
2298	9.9	1.3	0.3	chr19	14385009	14385311	(44232305)	C	AluSx	SINE/Alu	(6)	306	1	1829368
659	24.1	12.4	4.9	chr19	14632342	14632773	(43984843)	+	MLT1J	LTR/ERVL-MaLR	1	444	(4)	1830001
1988	17.5	3.6	0.6	chr19	14648556	14648905	(43968711)	+	MLT2D	LTR/ERVL	1	361	(53)	1830050
68	1.3	2.4	3.5	chr19	14650601	14650683	(43966933)	+	(TC)n	Simple_repeat	1	85	(0)	1830051
422	19.5	8.4	0.0	chr19	14650762	14650848	(43966768)	+	LTR16C	LTR/ERVL	395	489	(0)	1830049
345	28.5	13.1	9.5	chr19	15035414	15035750	(43581866)	+	L2c	LINE/L2	3021	3371	(16)	1830920
136	33.0	2.5	1.5	chr19	15035755	15036278	(43581338)	+	GA-rich	Low_complexity	1	537	(0)	1830921
864	21.3	3.4	2.0	chr19	16279103	16279303	(42338313)	+	MER20	DNA/hAT-Charlie	10	213	(6)	1833577
13	8.5	0.0	3.7	chr19	16279366	16279392	(42338224)	+	(ATTTG)n	Simple_repeat	1	27	(0)	1833578
670	7.5	1.1	0.0	chr19	16428231	16428324	(42189292)	+	AluY	SINE/Alu	1	95	(216)	1833904
353	14.7	1.4	0.0	chr19	16428325	16428392	(42189224)	+	AluY	SINE/Alu	233	301	(0)	1833904
62	28.5	2.5	3.6	chr19	16428393	16428634	(42188982)	+	A-rich	Low_complexity	1	248	(0)	1833905
2542	6.4	0.0	1.3	chr19	17297905	17298217	(41319399)	C	AluY	SINE/Alu	(2)	309	1	1835968
18	24.0	0.0	0.0	chr19	17298218	17298227	(41319389)	+	(TTTT)n	Simple_repeat	1	10	(0)	1835969
813	25.6	7.3	0.5	chr19	17298531	17298734	(41318882)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1835970
199	25.8	0.0	0.0	chr19	18292062	18292123	(40325493)	C	L2b	LINE/L2	(298)	3077	3016	1838554
215	28.6	2.2	0.8	chr19	19261966	19262675	(39354941)	+	GA-rich	Low_complexity	1	726	(0)	1840641
16	10.8	0.0	3.1	chr19	24033318	24033349	(34584267)	+	(GGGGTG)n	Simple_repeat	1	32	(0)	1847495
2057	24.8	10.0	6.7	chr19	28141478	28142189	(30475427)	C	MER21B	LTR/ERVL	(116)	752	15	1848332
158	25.5	1.9	4.3	chr19	28142245	28142767	(30474849)	+	GA-rich	Low_complexity	1	533	(0)	1848333
388	25.8	0.8	4.6	chr19	28988020	28988149	(29629467)	+	L1MC4a	LINE/L1	7540	7664	(218)	1849552
110	25.6	1.5	3.3	chr19	28988182	28988512	(29629104)	+	GA-rich	Low_complexity	1	336	(0)	1849557
918	23.2	0.5	0.9	chr19	28988516	28988732	(29628884)	+	L1MC4a	LINE/L1	7765	7980	(15)	1849552
210	27.3	12.0	0.0	chr19	29015243	29015330	(29602286)	+	L2	LINE/L2	2279	2378	(1041)	1849614
657	17.8	3.7	0.1	chr19	29015377	29016739	(29600877)	+	(CT)n	Simple_repeat	1	1414	(0)	1849615
955	31.0	7.1	1.6	chr19	29016785	29017210	(29600406)	C	LTR16B2	LTR/ERVL	(0)	462	12	1849616
389	33.5	5.9	1.1	chr19	29276306	29276580	(29341036)	+	L2	LINE/L2	2477	2765	(654)	1850005
20	21.9	4.3	6.6	chr19	29276587	29276658	(29340958)	+	(TTTCC)n	Simple_repeat	1	66	(0)	1850006
1865	10.4	3.8	0.0	chr19	29276659	29276909	(29340707)	C	AluSz	SINE/Alu	(3)	309	49	1850007
340	20.8	7.4	1.6	chr19	29438375	29438501	(29179115)	C	MLT1K	LTR/ERVL-MaLR	(372)	223	89	1850242
349	21.0	2.0	3.6	chr19	29438504	29439436	(29178180)	+	GA-rich	Low_complexity	1	952	(0)	1850243
1732	16.3	2.9	0.0	chr19	29439515	29439845	(29177771)	+	LTR38B	LTR/ERV1	11	351	(259)	1850244
64	52.3	2.2	2.1	chr19	29909880	29910642	(28706974)	+	(TTCT)n	Simple_repeat	1	767	(0)	1851119
32	2.3	6.7	0.0	chr19	29910643	29910687	(28706929)	+	(CCTT)n	Simple_repeat	1	48	(0)	1851120
64	52.3	2.2	2.1	chr19	29910688	29910974	(28706642)	+	(TTCT)n	Simple_repeat	4	287	(0)	1851121
80	1.0	4.9	1.9	chr19	29910975	29911076	(28706540)	+	(TTTC)n	Simple_repeat	1	107	(0)	1851122
63	1.6	1.6	0.0	chr19	30223437	30223498	(28394118)	+	(GA)n	Simple_repeat	1	63	(0)	1851569
18	26.5	0.0	0.0	chr19	30223976	30224017	(28393599)	+	(CT)n	Simple_repeat	1	42	(0)	1851570
16	0.0	0.0	0.0	chr19	30224024	30224040	(28393576)	+	(T)n	Simple_repeat	1	17	(0)	1851571
87	13.2	0.0	0.0	chr19	30286486	30286625	(28330991)	+	(GAGA)n	Simple_repeat	1	140	(0)	1851658
152	24.9	2.9	2.8	chr19	30504199	30504690	(28112926)	+	(TTCC)n	Simple_repeat	1	506	(0)	1851965
221	25.0	5.0	1.7	chr19	30504762	30504835	(28112781)	C	MIRc	SINE/MIR	(91)	171	96	1851966
545	30.0	4.9	5.5	chr19	30504872	30505199	(28112417)	+	L1M5	LINE/L1	5330	5655	(469)	1851967
250	23.7	2.3	1.4	chr19	30598835	30599536	(28018080)	+	(CCTC)n	Simple_repeat	1	708	(0)	1852078
78	3.9	0.0	0.0	chr19	30664205	30664284	(27953332)	+	(TC)n	Simple_repeat	1	80	(0)	1852161
265	23.2	19.2	4.4	chr19	30664470	30664649	(27952967)	+	MIRb	SINE/MIR	27	239	(29)	1852162
516	33.8	3.2	2.5	chr19	30815643	30815825	(27801791)	C	L2	LINE/L2	(1429)	1990	1804	1852337
108	43.9	1.5	2.9	chr19	30815826	30816635	(27800981)	+	(TCTT)n	Simple_repeat	1	822	(0)	1852343
143	27.1	5.8	3.4	chr19	31014364	31015072	(27602544)	+	GA-rich	Low_complexity	1	725	(0)	1852603
192	20.2	6.6	0.7	chr19	31611304	31611845	(27005771)	+	GA-rich	Low_complexity	1	578	(0)	1853502
2717	21.5	4.9	1.5	chr19	34722491	34722849	(23894767)	+	HERVS71-int	LTR/ERV1	4	481	(8497)	1859045
46	10.3	1.4	0.0	chr19	34722850	34722923	(23894693)	+	(TC)n	Simple_repeat	1	75	(0)	1859046
2717	15.3	3.4	2.4	chr19	34722924	34723282	(23894334)	+	HERVS71-int	LTR/ERV1	482	849	(8129)	1859045
755	13.1	5.3	3.1	chr19	35958686	35958815	(22658801)	+	FLAM_C	SINE/Alu	1	133	(10)	1861550
32	12.8	0.0	0.0	chr19	35958820	35958872	(22658744)	+	(AGGG)n	Simple_repeat	1	53	(0)	1861551
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
26	23.7	3.8	3.6	chr19	36272210	36272218	(22345398)	+	(CTGTCT)n	Simple_repeat	67	110	(0)	1862255
665	22.1	2.6	0.0	chr19	36378309	36378457	(22239159)	C	LTR65	LTR/ERV1	(499)	170	18	1862426
949	24.6	3.8	0.7	chr19	37217404	37217682	(21399934)	C	L1MB7	LINE/L1	(0)	6184	5897	1864045
12	12.6	0.0	3.6	chr19	38210686	38210713	(20406903)	+	(CCTTC)n	Simple_repeat	1	28	(0)	1866115
1682	19.5	1.3	1.6	chr19	39146556	39146862	(19470754)	+	AluJb	SINE/Alu	1	306	(6)	1868386
619	30.3	3.9	10.8	chr19	39146863	39146925	(19470691)	C	L2b	LINE/L2	(381)	2994	2931	1868384
3640	17.8	6.6	2.6	chr19	39146945	39147053	(19470563)	C	L1MD1	LINE/L1	(53)	6189	6082	1868387
30	2.5	5.0	0.0	chr19	39147054	39147093	(19470523)	+	(TGTCAAT)n	Simple_repeat	1	42	(0)	1868388
151	0.0	4.0	0.0	chr19	40848941	40849089	(17768527)	+	(AG)n	Simple_repeat	1	155	(0)	1872082
12	20.7	4.8	6.1	chr19	40849183	40849245	(17768371)	+	GA-rich	Low_complexity	1	66	(0)	1872083
331	27.6	2.1	2.3	chr19	40959295	40960432	(17657184)	+	(TC)n	Simple_repeat	1	1162	(0)	1872320
2007	12.5	1.0	0.7	chr19	42074887	42075182	(16542434)	C	AluSz	SINE/Alu	(15)	297	1	1874518
45	20.0	5.0	2.0	chr19	42089172	42089310	(16528306)	+	GA-rich	Low_complexity	1	146	(0)	1874543
15	17.9	5.6	3.5	chr19	42089362	42089415	(16528201)	+	(TTTC)n	Simple_repeat	1	57	(0)	1874544
2400	10.7	0.0	0.0	chr19	42194480	42194788	(16422828)	+	AluSx	SINE/Alu	4	312	(0)	1874778
403	35.2	3.4	3.2	chr19	42194789	42194821	(16422795)	+	L1ME3B	LINE/L1	6063	6095	(1787)	1874774
178	19.6	0.6	1.1	chr19	42194822	42195184	(16422432)	+	G-rich	Low_complexity	1	365	(0)	1874779
70	18.6	2.2	3.7	chr19	42195289	42195322	(16422294)	+	(TTCC)n	Simple_repeat	1	32	(0)	1874780
2479	8.4	0.0	0.0	chr19	42195323	42195631	(16421985)	C	AluY	SINE/Alu	(2)	309	1	1874781
3188	15.2	0.2	0.2	chr19	42495401	42495868	(16121748)	C	MER41-int	LTR/ERV1	(5304)	642	175	1875397
44	2.3	0.0	0.0	chr19	42495870	42495914	(16121702)	+	(TGCC)n	Simple_repeat	1	45	(0)	1875403
67	19.8	2.0	0.7	chr19	42495915	42496061	(16121555)	+	(TCCT)n	Simple_repeat	1	150	(0)	1875404
420	9.1	0.0	0.0	chr19	42496089	42496143	(16121473)	C	U6	snRNA	(52)	55	1	1875405
33	15.4	1.5	1.4	chr19	43119643	43119710	(15497906)	+	(CCTC)n	Simple_repeat	1	69	(0)	1876254
292	25.9	2.6	2.6	chr19	43446734	43446848	(15170768)	+	Charlie18a	DNA/hAT-Charlie	212	326	(16)	1876789
720	15.7	0.0	0.0	chr19	43447300	43447420	(15170196)	C	AluJb	SINE/Alu	(7)	305	185	1876790
314	24.8	16.9	0.0	chr19	43670360	43670472	(14947144)	+	MIR	SINE/MIR	17	152	(110)	1877380
37	0.0	0.0	0.0	chr19	43901552	43901583	(14716033)	+	(CA)n	Simple_repeat	1	32	(0)	1877885
5948	20.2	5.5	4.2	chr19	44190635	44192284	(14425332)	C	MER65-int	LTR/ERV1	(1287)	4069	2693	1878343
26	14.3	5.6	0.0	chr19	44192287	44192340	(14425276)	+	GA-rich	Low_complexity	1	57	(0)	1878345
279	17.0	0.0	0.0	chr19	44192341	44192393	(14425223)	C	MER65-int	LTR/ERV1	(3787)	2852	2800	1878343
488	12.7	8.7	7.3	chr19	44192435	44192570	(14425046)	C	MER65-int	LTR/ERV1	(3228)	3411	3274	1878346
1192	10.6	0.3	0.0	chr19	44456469	44457877	(14159739)	C	ACRO1	Satellite/acro	(55)	1412	1	1878760
136	19.2	2.3	6.7	chr19	44489758	44490164	(14127452)	+	A-rich	Low_complexity	1	385	(0)	1878813
33	0.0	0.0	0.0	chr19	44490165	44490195	(14127421)	+	(AGGG)n	Simple_repeat	1	31	(0)	1878814
136	19.2	2.3	6.7	chr19	44490196	44490228	(14127388)	+	A-rich	Low_complexity	386	421	(0)	1878815
451	18.4	3.8	0.0	chr19	44490241	44490316	(14127300)	C	AluJr	SINE/Alu	(233)	79	1	1878816
1414	28.8	5.8	4.0	chr19	44676916	44677417	(13940199)	C	MLT1K	LTR/ERVL-MaLR	(72)	523	11	1879304
43	0.0	4.5	0.0	chr19	44677433	44677476	(13940140)	+	(GA)n	Simple_repeat	1	46	(0)	1879306
198	34.5	9.8	2.9	chr19	44677495	44677664	(13939952)	C	L3	LINE/CR1	(176)	3923	3741	1879307
1788	18.9	0.3	0.0	chr19	45195211	45195506	(13422110)	C	AluJb	SINE/Alu	(15)	297	1	1880668
48	5.6	0.0	0.0	chr19	45195546	45195602	(13422014)	+	(CCTC)n	Simple_repeat	1	57	(0)	1880669
2065	12.5	0.0	0.0	chr19	45195616	45195894	(13421722)	C	AluSq2	SINE/Alu	(34)	279	1	1880670
11	13.2	5.7	2.7	chr19	45507667	45507701	(13109915)	+	(GAGCCC)n	Simple_repeat	1	37	(0)	1881495
911	11.3	0.8	0.8	chr19	45691538	45691670	(12925946)	C	FLAM_C	SINE/Alu	(10)	133	1	1882013
12	21.2	2.5	2.4	chr19	45730644	45730683	(12886933)	+	(CCACC)n	Simple_repeat	1	41	(0)	1882116
93	10.8	4.3	0.6	chr19	45959696	45959857	(12657759)	+	GA-rich	Low_complexity	1	169	(0)	1882684
1939	24.9	11.6	9.5	chr19	46132077	46133206	(12484410)	C	HERV35I-int	LTR/ERV1	(5736)	1182	26	1882995
34	21.6	3.3	0.0	chr19	47243283	47243373	(11374243)	+	(CCCGC)n	Simple_repeat	1	94	(0)	1885632
2285	11.0	1.3	0.3	chr19	47454805	47455105	(11162511)	+	AluSq	SINE/Alu	2	305	(8)	1886203
35	6.6	2.8	5.5	chr19	47455106	47455179	(11162437)	+	(GGAGA)n	Simple_repeat	1	72	(0)	1886204
577	28.5	2.4	2.4	chr19	47455350	47455561	(11162055)	+	L2a	LINE/L2	3198	3409	(17)	1886205
94	29.5	0.0	0.4	chr19	47459509	47459745	(11157871)	+	(TG)n	Simple_repeat	1	236	(0)	1886215
1015	16.0	8.4	0.0	chr19	47714098	47714358	(10903258)	C	L1MC4	LINE/L1	(1037)	7005	6783	1886853
1753	8.5	9.3	0.4	chr19	47849355	47849600	(10768016)	C	AluSx1	SINE/Alu	(7)	305	36	1887234
69	0.0	1.6	0.0	chr19	47849623	47849684	(10767932)	+	(AG)n	Simple_repeat	1	63	(0)	1887235
935	18.1	0.6	0.0	chr19	47849932	47850091	(10767525)	+	AluJo	SINE/Alu	140	300	(12)	1887236
355	21.2	3.4	5.6	chr19	48203649	48203738	(10413878)	+	L2a	LINE/L2	3338	3425	(1)	1888195
18	11.7	8.0	3.7	chr19	48645813	48645862	(9971754)	+	(CT)n	Simple_repeat	1	54	(0)	1889271
48	24.7	2.8	5.5	chr19	48646013	48646225	(9971391)	+	(CTCCTCC)n	Simple_repeat	1	219	(0)	1889272
64	28.7	3.2	1.6	chr19	48868148	48868393	(9749223)	+	(TC)n	Simple_repeat	1	254	(0)	1889821
404	20.0	0.8	6.4	chr19	48868422	48868672	(9748944)	C	HERVIP10FH-int	LTR/ERV1	(4122)	980	744	1889822
249	26.0	1.4	4.0	chr19	49403460	49403535	(9214081)	C	MLT1J	LTR/ERVL-MaLR	(339)	173	100	1891041
181	27.7	6.7	8.9	chr19	49404377	49404499	(9213117)	+	L2c	LINE/L2	3033	3152	(235)	1891042
1883	15.8	2.9	0.3	chr19	49703198	49703500	(8914116)	C	AluYf1	SINE/Alu	(0)	311	1	1891726
59	24.6	0.5	3.8	chr19	49703501	49703563	(8914053)	+	(TCCT)n	Simple_repeat	4	62	(0)	1891727
38	0.0	0.0	0.0	chr19	49703564	49703598	(8914018)	+	(CCTC)n	Simple_repeat	1	35	(0)	1891728
59	24.6	0.5	3.8	chr19	49703599	49703620	(8913996)	+	(TCCT)n	Simple_repeat	3	24	(0)	1891729
2021	16.8	0.3	0.0	chr19	49703623	49703932	(8913684)	C	AluJr	SINE/Alu	(1)	311	1	1891730
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
167	33.9	2.5	0.6	chr19	50169450	50170130	(8447486)	+	(CTCT)n	Simple_repeat	2	693	(0)	1892838
52	27.2	1.8	1.8	chr19	50169995	50170159	(8447457)	+	(TCCT)n	Simple_repeat	1	168	(0)	1892839
246	21.0	1.6	0.0	chr19	50170187	50170248	(8447368)	+	MIR	SINE/MIR	81	143	(119)	1892840
679	20.0	15.2	0.0	chr19	50489189	50489338	(8128278)	+	AluJb	SINE/Alu	129	305	(7)	1893630
1209	20.9	1.6	0.4	chr19	50497347	50500000	(8117616)	+	GA-rich	Low_complexity	1	2697	(0)	1893650
39	18.8	2.7	3.5	chr19	50719701	50719869	(7897747)	+	(CCTC)n	Simple_repeat	1	167	(0)	1894158
14	33.9	0.0	4.5	chr19	50719891	50719978	(7897638)	+	(CGCCCC)n	Simple_repeat	1	88	(0)	1894159
42	24.5	0.0	0.9	chr19	50969932	50970020	(7647596)	+	(TC)n	Simple_repeat	1	88	(0)	1894720
29	7.9	0.0	0.0	chr19	50970021	50970061	(7647555)	+	(CCTT)n	Simple_repeat	1	41	(0)	1894721
2349	9.4	1.0	1.3	chr19	50970062	50970370	(7647246)	C	AluSx1	SINE/Alu	(4)	308	1	1894722
123	27.0	5.4	2.2	chr19	51059177	51059733	(7557883)	+	(TA)n	Simple_repeat	1	587	(0)	1894931
152	28.0	3.7	1.8	chr19	51083231	51083511	(7534105)	+	GA-rich	Low_complexity	1	280	(0)	1894976
152	28.0	3.7	1.8	chr19	51083809	51083824	(7533792)	+	polypurine	Low_complexity	588	605	(0)	1894977
12	20.6	6.7	0.0	chr19	51366809	51366853	(7250763)	+	(TCCCTA)n	Simple_repeat	1	48	(0)	1895482
1795	18.9	7.0	9.3	chr19	51632163	51632559	(6985057)	+	MER31B	LTR/ERV1	3	388	(78)	1895929
2046	14.4	0.3	2.5	chr19	51632560	51632878	(6984738)	C	AluSx	SINE/Alu	(0)	312	1	1895930
415	32.0	11.1	3.9	chr19	51688155	51688544	(6929072)	+	L2c	LINE/L2	2917	3338	(49)	1896047
87	27.5	4.3	2.6	chr19	51688644	51689110	(6928506)	+	GA-rich	Low_complexity	1	475	(0)	1896048
14	7.2	6.9	0.0	chr19	51689179	51689207	(6928409)	+	(CCTCCC)n	Simple_repeat	1	31	(0)	1896049
2838	11.9	3.0	0.0	chr19	51903864	51904282	(6713334)	+	MER57A1	LTR/ERV1	1	432	(0)	1896457
1095	10.6	4.7	3.6	chr19	51904283	51904415	(6713201)	+	LTR8	LTR/ERV1	556	691	(0)	1896456
510	23.2	39.4	3.2	chr19	52049492	52049780	(6567836)	C	MLT1E2	LTR/ERVL-MaLR	(166)	461	63	1896694
1707	10.1	0.4	0.8	chr19	52270849	52271085	(6346531)	C	AluSx1	SINE/Alu	(76)	236	1	1897146
33	16.0	0.0	4.0	chr19	52315999	52316073	(6301543)	+	(TTGTT)n	Simple_repeat	1	75	(0)	1897229
235	15.9	0.0	0.0	chr19	52316103	52316146	(6301470)	+	Alu	SINE/Alu	252	295	(6)	1897230
34	0.0	0.0	0.0	chr19	53980058	53980086	(4637530)	+	(GT)n	Simple_repeat	1	29	(0)	1900731
238	25.5	1.0	0.5	chr19	54096199	54096810	(4520806)	+	(CTCT)n	Simple_repeat	1	618	(0)	1901067
218	25.6	7.5	5.5	chr19	54388316	54388406	(4229210)	C	MIR	SINE/MIR	(70)	192	100	1901622
166	21.0	2.4	0.3	chr19	54408423	54408794	(4208822)	+	GA-rich	Low_complexity	1	381	(0)	1901683
33	4.8	2.3	0.0	chr19	54473438	54473481	(4144135)	+	(GA)n	Simple_repeat	1	45	(0)	1901816
710	23.1	0.0	4.3	chr19	54674107	54674246	(3943370)	+	HUERS-P3-int	LTR/ERV1	4549	4682	(4237)	1902135
3534	17.5	6.1	0.5	chr19	54674248	54674877	(3942739)	+	HUERS-P3-int	LTR/ERV1	4901	5568	(3351)	1902135
171	22.0	3.4	0.2	chr19	55066362	55066775	(3550841)	+	(TC)n	Simple_repeat	1	428	(0)	1902927
520	30.1	7.2	5.9	chr19	55066855	55067073	(3550543)	+	MLT1G1	LTR/ERVL-MaLR	368	589	(2)	1902928
791	18.9	10.5	4.4	chr19	55443556	55443760	(3173856)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1903745
24	13.6	0.0	0.0	chr19	55443846	55443887	(3173729)	+	(CTCT)n	Simple_repeat	1	42	(0)	1903746
689	26.8	3.2	1.6	chr19	55443974	55444159	(3173457)	+	MIR	SINE/MIR	51	239	(23)	1903747
187	25.0	0.0	3.7	chr19	55444126	55444179	(3173437)	+	L2c	LINE/L2	3364	3415	(11)	1903742
1616	17.7	1.4	2.7	chr19	55444224	55444522	(3173094)	+	AluJr	SINE/Alu	3	297	(15)	1903748
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
509	31.7	7.1	2.4	chr19	56405762	56405974	(2211642)	C	MIRb	SINE/MIR	(40)	228	5	1905748
189	28.4	14.2	2.7	chr19	56406095	56406206	(2211410)	C	MIRc	SINE/MIR	(133)	135	9	1905749
68	26.2	3.3	0.0	chr19	58020846	58021058	(596558)	+	GA-rich	Low_complexity	1	220	(0)	1908720
13	29.9	0.0	0.0	chr19	58021073	58021112	(596504)	+	A-rich	Low_complexity	1	40	(0)	1908721
552	13.3	0.0	0.0	chr19	58021113	58021187	(596429)	+	AluSz6	SINE/Alu	1	75	(237)	1908722
663	13.7	0.0	0.0	chr19	58021181	58021275	(596341)	C	AluSx	SINE/Alu	(217)	95	1	1908723
126	18.2	0.0	1.2	chr19	58576330	58576569	(41047)	+	(TTCC)n	Simple_repeat	1	240	(0)	1909753
375	27.7	5.7	2.6	chr2	72910	73061	(242120468)	+	MER67A	LTR/ERV1	387	543	(0)	1910884
375	30.8	10.3	3.2	chr2	207721	208076	(241985453)	+	L1M7	LINE/L1	715	1101	(5117)	1911032
2481	28.0	6.6	7.6	chr2	1049992	1051392	(241142137)	C	L1M5	LINE/L1	(784)	5362	3977	1911846
34	31.9	4.2	1.0	chr2	1750407	1750517	(240443012)	+	(ATCC)n	Simple_repeat	1	112	(0)	1912478
166	2.8	2.1	1.0	chr2	1750518	1750706	(240442823)	+	(CCTC)n	Simple_repeat	1	193	(0)	1912479
34	31.9	4.2	1.0	chr2	1750707	1750784	(240442745)	+	(ATCC)n	Simple_repeat	1	83	(0)	1912480
316	23.1	1.1	1.2	chr2	1866372	1867120	(240326409)	+	GA-rich	Low_complexity	1	757	(0)	1912599
162	12.6	2.2	5.5	chr2	1952685	1953043	(240240486)	+	(TCCT)n	Simple_repeat	1	367	(0)	1912690
1418	16.4	0.0	0.5	chr2	1953048	1953261	(240240268)	C	AluJb	SINE/Alu	(98)	214	2	1912691
1422	25.2	11.2	6.3	chr2	3396165	3396871	(238796658)	C	L1MEc	LINE/L1	(4698)	1702	953	1914421
2417	10.3	0.0	0.3	chr2	4409757	4410066	(237783463)	C	AluSc	SINE/Alu	(0)	309	1	1915707
74	13.2	0.0	3.0	chr2	4410126	4410260	(237783269)	+	(CCTC)n	Simple_repeat	1	135	(0)	1915708
1487	25.2	4.3	1.4	chr2	6568159	6568585	(235624944)	+	MER67A	LTR/ERV1	84	523	(20)	1918709
474	28.9	15.3	3.9	chr2	6812818	6813329	(235380200)	+	HAL1	LINE/L1	1	581	(1926)	1919058
129	21.9	2.0	0.7	chr2	6813523	6813817	(235379712)	+	G-rich	Low_complexity	1	301	(0)	1919059
768	24.9	18.5	4.3	chr2	6813818	6814240	(235379289)	C	MLT1D	LTR/ERVL-MaLR	(4)	501	5	1919060
2149	12.5	0.0	1.0	chr2	9174493	9174795	(233018734)	+	AluSz	SINE/Alu	1	300	(12)	1922493
370	23.4	5.0	0.0	chr2	9174864	9174957	(233018572)	C	MER20	DNA/hAT-Charlie	(57)	162	64	1922494
15	16.3	2.9	0.0	chr2	10936134	10936168	(231257361)	+	(AATG)n	Simple_repeat	1	36	(0)	1925754
12	25.6	0.0	0.0	chr2	10936254	10936287	(231257242)	+	(GAAT)n	Simple_repeat	1	34	(0)	1925755
14	15.4	5.6	0.0	chr2	11830175	11830210	(230363319)	+	(GTGA)n	Simple_repeat	1	38	(0)	1927316
69	0.0	0.0	0.0	chr2	17872098	17872158	(224321371)	+	(TCTT)n	Simple_repeat	1	61	(0)	1936657
59	21.1	1.3	3.8	chr2	17872159	17872316	(224321213)	+	(TCCT)n	Simple_repeat	1	160	(0)	1936658
173	20.0	4.0	4.0	chr2	19690076	19690601	(222502928)	+	GA-rich	Low_complexity	1	547	(0)	1939161
587	31.9	7.3	6.1	chr2	19690704	19691080	(222502449)	+	L2c	LINE/L2	3006	3387	(0)	1939162
9271	9.7	3.3	0.1	chr2	19782289	19783533	(222409996)	+	THE1A-int	LTR/ERVL-MaLR	1	1286	(294)	1939292
48	10.0	4.4	2.1	chr2	19783887	19783976	(222409553)	+	(CA)n	Simple_repeat	1	94	(0)	1939293
1716	19.8	8.6	10.3	chr2	22804311	22804730	(219388799)	C	MER67D	LTR/ERV1	(0)	514	119	1943535
1977	16.8	0.0	0.3	chr2	23723011	23723302	(218470227)	+	AluJb	SINE/Alu	2	292	(20)	1944731
37	27.3	4.6	3.3	chr2	23723327	23723499	(218470030)	+	GA-rich	Low_complexity	1	181	(0)	1944732
4884	13.7	3.6	1.8	chr2	23723507	23724407	(218469122)	+	L1MA5A	LINE/L1	5963	6935	(4)	1944729
83	19.4	2.7	1.0	chr2	23818143	23818330	(218375199)	+	GA-rich	Low_complexity	1	193	(0)	1944887
32	31.5	4.6	2.0	chr2	23818331	23818337	(218375192)	+	(GAGACA)n	Simple_repeat	1	204	(0)	1944888
24	6.8	0.0	0.0	chr2	23818357	23818387	(218375142)	+	(A)n	Simple_repeat	1	31	(0)	1944889
422	14.0	1.2	8.3	chr2	23939097	23939189	(218254340)	C	MER92B	LTR/ERV1	(7)	629	546	1945141
261	18.2	5.2	0.0	chr2	23939187	23939241	(218254288)	C	MER92B	LTR/ERV1	(50)	586	529	1945142
1807	21.5	5.8	8.3	chr2	23939242	23939827	(218253702)	C	MER92B	LTR/ERV1	(4)	632	70	1945143
2230	12.3	0.0	0.0	chr2	26077698	26077997	(216115532)	+	AluSc8	SINE/Alu	1	300	(11)	1949287
2338	18.7	6.1	0.0	chr2	26078018	26078540	(216114989)	+	L1M4	LINE/L1	4310	4866	(1280)	1949288
2435	22.9	3.6	6.6	chr2	30277798	30278373	(211915156)	+	MLT1F2	LTR/ERVL-MaLR	3	560	(0)	1956688
948	31.8	13.7	6.6	chr2	30278419	30279387	(211914142)	+	L2c	LINE/L2	1317	2371	(1048)	1956689
12625	2.7	0.0	0.0	chr2	31182115	31183755	(211009774)	+	L1PA3	LINE/L1	3920	5560	(595)	1958100
40	22.4	2.5	3.3	chr2	31183757	31183874	(211009655)	+	(TTCC)n	Simple_repeat	1	121	(0)	1958101
2261	11.4	1.6	0.3	chr2	31183875	31184182	(211009347)	C	AluSz	SINE/Alu	(0)	312	1	1958102
689	16.7	0.0	0.9	chr2	31833263	31833370	(210360159)	+	AluJo	SINE/Alu	87	193	(119)	1958943
39	8.2	0.0	0.0	chr2	31833371	31833423	(210360106)	+	(AG)n	Simple_repeat	1	53	(0)	1958944
302	24.6	6.7	0.0	chr2	31833427	31833544	(210359985)	C	MIRc	SINE/MIR	(132)	136	7	1958945
319	24.3	0.0	1.3	chr2	31833552	31833626	(210359903)	C	Charlie9	DNA/hAT-Charlie	(0)	2757	2684	1958946
1874	12.9	0.4	0.0	chr2	31994667	31994922	(210198607)	+	AluJb	SINE/Alu	1	257	(55)	1959249
51	16.1	0.0	2.9	chr2	31994926	31995029	(210198500)	+	GA-rich	Low_complexity	1	104	(0)	1959250
574	24.5	11.8	5.4	chr2	31995097	31995169	(210198360)	+	L1ME4b	LINE/L1	953	1019	(5381)	1959245
291	19.3	3.4	0.0	chr2	31996114	31996170	(210197359)	+	Alu	SINE/Alu	2	60	(73)	1959252
43	10.1	1.5	0.0	chr2	31996171	31996235	(210197294)	+	(GA)n	Simple_repeat	1	66	(0)	1959253
512	24.8	2.9	3.8	chr2	31996238	31996270	(210197259)	+	L1ME4b	LINE/L1	2657	2689	(3630)	1959245
2192	12.0	1.3	0.0	chr2	31996271	31996570	(210196959)	+	AluSz	SINE/Alu	6	309	(3)	1959254
511	28.1	11.3	3.0	chr2	32097323	32097557	(210095972)	C	L1ME4b	LINE/L1	(15)	877	621	1959538
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
2201	10.4	1.4	0.0	chr2	33410955	33411241	(208782288)	C	AluSx	SINE/Alu	(21)	291	1	1961912
28	31.1	5.1	4.9	chr2	36056652	36056885	(206136644)	+	GA-rich	Low_complexity	1	246	(0)	1965538
321	19.8	6.2	8.1	chr2	36056886	36056984	(206136545)	+	L1MEd	LINE/L1	1979	2075	(5011)	1965539
26	5.7	0.0	0.0	chr2	36056987	36057023	(206136506)	+	(GGAG)n	Simple_repeat	1	37	(0)	1965540
56	0.0	3.5	0.0	chr2	36057025	36057081	(206136448)	+	(AAGG)n	Simple_repeat	1	59	(0)	1965541
44	2.4	0.0	0.0	chr2	36057111	36057152	(206136377)	+	(TG)n	Simple_repeat	1	42	(0)	1965542
331	27.7	11.9	5.5	chr2	36057410	36057573	(206135956)	+	MIRb	SINE/MIR	8	183	(85)	1965543
2892	27.5	2.3	6.2	chr2	38045505	38046423	(204147106)	+	L1MB7	LINE/L1	10	891	(1765)	1968617
1766	21.6	3.5	5.9	chr2	38046424	38046702	(204146827)	+	L1MB7	LINE/L1	1543	1808	(848)	1968617
106	12.4	0.0	0.0	chr2	38088745	38088910	(204104619)	+	(TCTC)n	Simple_repeat	1	166	(0)	1968669
492	32.5	14.1	5.7	chr2	38089210	38089803	(204103726)	C	L3	LINE/CR1	(174)	3925	3274	1968670
1788	12.5	0.7	7.8	chr2	38600445	38600764	(203592765)	+	AluJb	SINE/Alu	1	297	(15)	1969541
232	32.2	6.3	6.9	chr2	38600765	38600832	(203592697)	C	MIRc	SINE/MIR	(192)	76	8	1969540
362	27.7	7.8	0.0	chr2	38934164	38934293	(203259236)	+	L2c	LINE/L2	2069	2209	(1210)	1970278
987	26.2	15.9	2.0	chr2	38934694	38935183	(203258346)	C	L2a	LINE/L2	(43)	3383	2818	1970279
582	28.1	16.2	2.9	chr2	39108030	39108443	(203085086)	+	L2	LINE/L2	2473	2952	(467)	1970559
20	13.0	0.0	0.0	chr2	39108542	39108576	(203084953)	+	(CATT)n	Simple_repeat	1	35	(0)	1970560
830	34.7	5.9	6.0	chr2	40725382	40726127	(201467402)	+	LTR78	LTR/ERV1	554	1298	(6)	1972987
24	6.8	0.0	0.0	chr2	40759937	40759967	(201433562)	+	(CA)n	Simple_repeat	1	31	(0)	1973039
11	17.6	5.0	2.4	chr2	40760003	40760042	(201433487)	+	(CATTTC)n	Simple_repeat	1	42	(0)	1973040
17	8.1	0.0	0.0	chr2	46617235	46617260	(195576269)	+	(CTG)n	Simple_repeat	1	26	(0)	1982534
24	19.7	1.2	6.9	chr2	47175810	47175896	(195017633)	+	(CGCC)n	Simple_repeat	1	82	(0)	1983480
97	12.7	1.2	0.6	chr2	47506985	47507146	(194686383)	+	(TCTC)n	Simple_repeat	1	164	(0)	1984230
2001	14.4	0.3	0.0	chr2	47507167	47507471	(194686058)	+	AluSx1	SINE/Alu	5	310	(2)	1984231
12	24.1	0.0	0.0	chr2	47906000	47906033	(194287496)	+	GA-rich	Low_complexity	1	34	(0)	1985043
18	0.0	0.0	0.0	chr2	47906067	47906089	(194287440)	+	(GCG)n	Simple_repeat	1	23	(0)	1985044
15	27.3	1.6	3.2	chr2	47906142	47906203	(194287326)	+	G-rich	Low_complexity	1	63	(0)	1985045
18	14.2	10.6	0.0	chr2	47906280	47906326	(194287203)	+	(TC)n	Simple_repeat	1	52	(0)	1985046
18	25.1	3.3	0.0	chr2	47906520	47906580	(194286949)	+	G-rich	Low_complexity	1	63	(0)	1985047
3963	22.6	6.6	5.0	chr2	55018336	55020461	(187173068)	+	L1MC4	LINE/L1	4122	7634	(408)	1995142
2263	8.9	3.0	2.3	chr2	55615581	55615882	(186577647)	+	AluSc	SINE/Alu	2	305	(4)	1996247
22	5.8	2.6	2.6	chr2	56184633	56184670	(186008859)	+	(GGC)n	Simple_repeat	1	39	(0)	1997104
2101	18.6	7.2	1.8	chr2	56450563	56451012	(185742517)	+	MER67D	LTR/ERV1	11	486	(28)	1997425
238	31.3	8.6	12.2	chr2	56451257	56451558	(185741971)	C	L2c	LINE/L2	(2)	3385	3096	1997426
888	17.0	3.4	0.0	chr2	58120581	58120774	(184072755)	+	MER67D	LTR/ERV1	1	209	(502)	1999388
983	20.5	6.5	0.0	chr2	58120789	58121003	(184072526)	+	MER67D	LTR/ERV1	242	471	(43)	1999388
356	31.2	20.3	0.1	chr2	58121038	58121241	(184072288)	+	MIRb	SINE/MIR	11	262	(0)	1999389
32	0.0	0.0	0.0	chr2	58428659	58428688	(183764841)	+	(TGC)n	Simple_repeat	1	30	(0)	1999769
33	5.3	0.0	0.0	chr2	58734919	58734958	(183458571)	+	(CTCC)n	Simple_repeat	1	40	(0)	2000201
21	18.1	3.3	3.2	chr2	58734959	58735019	(183458510)	+	(TTCC)n	Simple_repeat	1	63	(0)	2000202
293	33.2	7.7	3.5	chr2	59080667	59080866	(183112663)	C	MIRb	SINE/MIR	(37)	231	19	2000641
51	29.7	4.1	0.5	chr2	59080889	59081082	(183112447)	+	GA-rich	Low_complexity	1	202	(0)	2000642
60	27.6	0.6	1.7	chr2	59366180	59366353	(182827176)	+	GA-rich	Low_complexity	1	175	(0)	2001038
481	22.5	6.5	0.8	chr2	60559888	60560017	(181633512)	+	MER131	DNA?	24	161	(54)	2002595
57	8.2	3.3	0.0	chr2	60560050	60560140	(181633389)	+	(TC)n	Simple_repeat	1	94	(0)	2002596
15	13.9	0.0	0.0	chr2	60560301	60560324	(181633205)	+	(GT)n	Simple_repeat	1	24	(0)	2002597
216	40.0	0.6	0.6	chr2	60926307	60926462	(181267067)	+	L2b	LINE/L2	1909	2064	(1355)	2003352
13	18.8	0.0	5.0	chr2	61471025	61471035	(180722494)	+	(CACCGC)n	Simple_repeat	1	39	(0)	2004394
16	11.6	0.0	0.0	chr2	61471036	61471063	(180722466)	+	(CGC)n	Simple_repeat	1	28	(0)	2004395
37	0.0	0.0	0.0	chr2	61537753	61537784	(180655745)	+	(AC)n	Simple_repeat	1	32	(0)	2004522
17	25.1	0.0	0.0	chr2	61538196	61538242	(180655287)	+	(GCTGCC)n	Simple_repeat	1	47	(0)	2004523
1350	15.0	3.5	1.2	chr2	62018761	62019009	(180174520)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	154	2005681
24	22.1	1.4	1.4	chr2	62019024	62019060	(180174469)	+	(TCCC)n	Simple_repeat	1	38	(0)	2005682
32	7.9	0.0	0.0	chr2	62019061	62019101	(180174428)	+	(TC)n	Simple_repeat	1	41	(0)	2005683
35	10.9	0.7	0.7	chr2	62019102	62019166	(180174363)	+	(TCCC)n	Simple_repeat	1	65	(0)	2005684
2303	11.7	0.7	0.3	chr2	62019167	62019474	(180174055)	C	AluSq2	SINE/Alu	(4)	309	1	2005685
533	34.9	5.4	0.4	chr2	62659818	62660047	(179533482)	+	MIRb	SINE/MIR	27	268	(0)	2006819
51	38.3	0.5	0.5	chr2	62660049	62660265	(179533264)	+	(CTA)n	Simple_repeat	1	218	(0)	2006820
540	20.8	13.3	5.0	chr2	64114674	64114866	(178078663)	C	MER20	DNA/hAT-Charlie	(2)	217	1	2008861
26	16.8	0.0	0.0	chr2	64768704	64768752	(177424777)	+	(TCCC)n	Simple_repeat	1	49	(0)	2009903
22	0.0	0.0	0.0	chr2	64768782	64768805	(177424724)	+	(T)n	Simple_repeat	1	24	(0)	2009904
2354	10.4	0.0	0.0	chr2	65245238	65245526	(176948003)	+	AluSx1	SINE/Alu	1	289	(23)	2010906
61	17.4	0.0	0.0	chr2	65835481	65835592	(176357937)	+	GA-rich	Low_complexity	1	112	(0)	2011983
15	21.1	2.5	2.4	chr2	66434929	66434968	(175758561)	+	(TG)n	Simple_repeat	1	41	(0)	2012778
30	9.6	2.2	0.0	chr2	66435286	66435331	(175758198)	+	(AG)n	Simple_repeat	1	47	(0)	2012779
23	17.8	0.0	0.0	chr2	66435532	66435571	(175757958)	+	(T)n	Simple_repeat	1	40	(0)	2012780
19	12.8	0.0	0.0	chr2	66574855	66574888	(175618641)	+	(GCA)n	Simple_repeat	1	34	(0)	2012926
17	15.8	2.3	2.2	chr2	66574938	66575009	(175618520)	+	(CTACCC)n	Simple_repeat	1	72	(0)	2012927
31	41.9	2.3	0.0	chr2	67843922	67844096	(174349433)	+	GA-rich	Low_complexity	1	179	(0)	2014630
44	30.2	2.5	3.9	chr2	67844242	67844443	(174349086)	+	(CTCC)n	Simple_repeat	1	207	(0)	2014631
247	28.4	0.0	5.8	chr2	67844462	67844547	(174348982)	C	MLT1O	LTR/ERVL-MaLR	(378)	164	84	2014632
1563	15.2	0.3	5.7	chr2	68419984	68420298	(173773231)	+	MER33	DNA/hAT-Charlie	20	317	(7)	2015584
1382	26.6	3.2	2.4	chr2	68696160	68696621	(173496908)	+	LTR8B	LTR/ERV1	343	808	(12)	2015955
1074	15.6	21.0	1.5	chr2	68696618	68696956	(173496573)	C	LTR49	LTR/ERV1	(172)	423	1	2015956
13204	15.7	4.0	1.7	chr2	68941108	68944555	(173248974)	C	L1PA16	LINE/L1	(2684)	3799	264	2016282
252	30.6	5.9	1.6	chr2	69623783	69624014	(172569515)	+	L1ME4b	LINE/L1	5115	5351	(795)	2017401
16	22.5	4.3	4.2	chr2	69624022	69624090	(172569439)	+	GA-rich	Low_complexity	1	72	(0)	2017402
535	31.7	6.8	1.5	chr2	69624091	69624511	(172569018)	+	L1ME4b	LINE/L1	251	702	(2075)	2017401
2111	11.7	0.7	1.0	chr2	69830923	69831220	(172362309)	C	AluSx	SINE/Alu	(15)	297	1	2017826
81	9.9	2.2	1.4	chr2	69902188	69902324	(172291205)	+	(TCCTCCT)n	Simple_repeat	1	140	(0)	2017977
245	22.7	2.2	2.2	chr2	69902325	69902863	(172290666)	+	(CTTCTG)n	Simple_repeat	2	692	(0)	2017978
205	28.7	1.6	2.5	chr2	69902864	69902932	(172290597)	+	(TCT)n	Simple_repeat	2	759	(0)	2017979
1089	16.8	0.0	1.8	chr2	69902933	69903099	(172290430)	C	FRAM	SINE/Alu	(2)	174	11	2017980
271	15.1	1.9	1.9	chr2	70314904	70314957	(171878572)	C	MER92B	LTR/ERV1	(8)	628	575	2018872
589	23.0	0.0	5.2	chr2	70314958	70315092	(171878437)	+	FLAM_A	SINE/Alu	1	128	(14)	2018873
234	18.6	0.0	0.0	chr2	70315111	70315153	(171878376)	C	MER92B	LTR/ERV1	(51)	585	543	2018872
2476	20.7	4.1	4.4	chr2	70315241	70315343	(171878186)	C	MER92B	LTR/ERV1	(51)	585	490	2018872
2185	11.8	0.3	3.4	chr2	70315344	70315665	(171877864)	C	AluSz6	SINE/Alu	(0)	312	1	2018874
33	33.5	3.6	2.0	chr2	70470037	70470229	(171723300)	+	GA-rich	Low_complexity	1	200	(0)	2019153
403	32.7	6.2	9.1	chr2	70470233	70470562	(171722967)	C	L4_A_Mam	LINE/RTE-X	(88)	4902	4583	2019154
428	20.7	10.0	4.3	chr2	73064288	73064428	(169129101)	C	MER5B	DNA/hAT-Charlie	(0)	178	29	2023040
2263	10.1	1.0	0.0	chr2	73276128	73276425	(168917104)	+	AluSq2	SINE/Alu	1	301	(12)	2023434
368	32.9	7.7	0.0	chr2	73276498	73276560	(168916969)	+	L1M5	LINE/L1	3190	3252	(2894)	2023435
63	4.7	0.0	0.0	chr2	73276561	73276627	(168916902)	+	(AG)n	Simple_repeat	1	67	(0)	2023436
368	32.9	7.7	0.0	chr2	73276628	73276837	(168916692)	+	L1M5	LINE/L1	3253	3485	(2661)	2023435
854	32.5	8.2	6.9	chr2	74574265	74574400	(167619129)	+	L2b	LINE/L2	2500	2644	(731)	2025590
263	11.1	0.0	0.0	chr2	74574401	74574436	(167619093)	C	U2	snRNA	(152)	36	1	2025591
854	32.5	8.2	6.9	chr2	74574437	74575095	(167618434)	+	L2b	LINE/L2	2645	3349	(26)	2025590
6175	25.2	5.6	2.0	chr2	74930235	74931700	(167261829)	+	FordPrefect	DNA/hAT-Tip100	162	1683	(0)	2026205
2038	25.6	5.1	4.8	chr2	74931701	74932487	(167261042)	C	L2b	LINE/L2	(1410)	2009	1221	2026203
1958	18.2	5.6	4.6	chr2	76210582	76211042	(165982487)	+	MER31B	LTR/ERV1	1	466	(0)	2028056
275	33.7	11.5	1.6	chr2	76211388	76211574	(165981955)	C	LTR104_Mam	LTR/Gypsy	(304)	1205	998	2028057
1406	21.6	7.8	1.2	chr2	76773098	76773434	(165420095)	+	MER67D	LTR/ERV1	154	514	(0)	2028787
512	22.5	1.5	0.0	chr2	77836565	77836687	(164356842)	+	AluJb	SINE/Alu	1	133	(0)	2030163
214	17.0	2.6	3.3	chr2	77836688	77837184	(164356345)	+	GA-rich	Low_complexity	1	510	(0)	2030164
6709	18.2	5.4	4.6	chr2	77837223	77839028	(164354501)	+	LTR49-int	LTR/ERV1	3610	5664	(667)	2030161
2380	10.8	0.3	0.0	chr2	78378811	78379117	(163814412)	+	AluSp	SINE/Alu	1	308	(5)	2030847
50	32.3	0.5	3.6	chr2	78379118	78379312	(163814217)	+	GA-rich	Low_complexity	1	196	(0)	2030848
48	2.0	1.9	0.0	chr2	78379365	78379416	(163814113)	+	(AAGAG)n	Simple_repeat	1	53	(0)	2030849
113	26.6	1.7	2.3	chr2	79850135	79850480	(162343049)	+	(TCCT)n	Simple_repeat	1	352	(0)	2032869
223	32.1	7.5	3.9	chr2	80001402	80001605	(162191924)	C	MIRc	SINE/MIR	(6)	262	51	2033081
256	30.5	4.4	7.9	chr2	80001720	80001883	(162191646)	+	Charlie15a	DNA/hAT-Charlie	64	221	(3)	2033082
13	22.0	2.3	2.2	chr2	80081478	80081491	(162112038)	+	(GTCTCT)n	Simple_repeat	1	14	(0)	2033227
27	0.0	0.0	0.0	chr2	80081492	80081517	(162112012)	+	(CTCC)n	Simple_repeat	1	26	(0)	2033228
13	22.0	2.3	2.2	chr2	80081518	80081546	(162111983)	+	(GTCTCT)n	Simple_repeat	3	32	(0)	2033229
473	22.9	2.2	9.1	chr2	83664608	83664782	(158528747)	C	MLT1E1A	LTR/ERVL-MaLR	(228)	425	255	2037959
76	18.6	2.0	0.0	chr2	83664786	83664935	(158528594)	+	(TC)n	Simple_repeat	1	153	(0)	2037960
348	28.4	1.0	1.0	chr2	83664981	83665076	(158528453)	C	MLT1E1A	LTR/ERVL-MaLR	(413)	147	52	2037959
31	8.9	6.3	1.5	chr2	83796284	83796346	(158397183)	+	GA-rich	Low_complexity	1	67	(0)	2038118
4665	25.1	5.1	7.1	chr2	84089456	84090388	(158103141)	+	L1MB5	LINE/L1	24	911	(5696)	2038515
53	5.0	0.0	0.0	chr2	84090389	84090450	(158103079)	+	(TCTCCCTC)n	Simple_repeat	1	62	(0)	2038516
5634	24.2	4.6	1.6	chr2	84090451	84091760	(158101769)	+	L1MB5	LINE/L1	912	2250	(5370)	2038515
2193	8.8	2.7	0.7	chr2	85637703	85637996	(156555533)	C	AluSx1	SINE/Alu	(12)	300	1	2041188
6805	6.0	0.3	38.3	chr2	86548188	86550427	(155643102)	C	SVA_A	Retroposon/SVA	(0)	1387	2	2042825
21	3.2	0.0	5.6	chr2	86550429	86550464	(155643065)	+	(AGGGAG)n	Simple_repeat	1	36	(0)	2042826
521	21.4	6.1	1.9	chr2	86550465	86550621	(155642908)	+	L1M5	LINE/L1	5086	5249	(897)	2042824
2013	18.7	1.4	4.8	chr2	87105557	87105972	(155087557)	+	MER54A	LTR/ERVL	3	401	(500)	2043771
86	0.0	1.3	0.0	chr2	87105973	87106049	(155087480)	+	(TC)n	Simple_repeat	1	78	(0)	2043772
2013	18.7	1.4	4.8	chr2	87106050	87106070	(155087459)	+	MER54A	LTR/ERVL	402	425	(476)	2043771
242	25.4	12.3	0.0	chr2	87288322	87288435	(154905094)	C	L2a	LINE/L2	(2507)	912	783	2044023
164	16.2	0.7	0.7	chr2	87288452	87288747	(154904782)	+	(TCCT)n	Simple_repeat	1	298	(0)	2044028
3507	18.8	3.2	1.0	chr2	87290182	87290854	(154902675)	+	L1MB7	LINE/L1	5481	6168	(16)	2044032
377	27.9	9.8	1.3	chr2	88180856	88180982	(154012547)	+	MIRb	SINE/MIR	11	150	(118)	2045422
19	4.3	0.0	0.0	chr2	88181574	88181597	(154011932)	+	(TG)n	Simple_repeat	1	24	(0)	2045423
4770	12.6	6.3	4.6	chr2	88181598	88182675	(154010854)	C	L1MB7	LINE/L1	(9)	6175	5082	2045424
299	32.1	7.5	1.2	chr2	88201054	88201214	(153992315)	C	LTR16A	LTR/ERVL	(248)	203	32	2045468
370	7.8	9.0	0.0	chr2	88201224	88201899	(153991630)	+	GA-rich	Low_complexity	1	737	(0)	2045469
37	5.9	3.8	0.0	chr2	88865278	88865371	(153328158)	+	(GA)n	Simple_repeat	1	97	(0)	2046719
29	5.4	0.0	8.7	chr2	89787191	89787259	(152406270)	+	(GATTCCATTC)n	Simple_repeat	1	69	(0)	2047588
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
20	0.0	0.0	10.3	chr2	95227086	95227124	(146966405)	+	(CTCC)n	Simple_repeat	1	39	(0)	2050383
34	7.2	0.0	0.0	chr2	95227125	95227169	(146966360)	+	(CCTT)n	Simple_repeat	1	45	(0)	2050384
1091	24.6	5.7	9.9	chr2	95227191	95227317	(146966212)	C	L1MC4	LINE/L1	(103)	7939	7832	2050385
56	12.7	3.1	0.0	chr2	95297163	95297258	(146896271)	+	GA-rich	Low_complexity	1	99	(0)	2050470
2031	17.2	7.7	1.4	chr2	98128569	98129005	(144064524)	+	MER74A	LTR/ERVL	1	467	(91)	2054581
838	19.8	5.5	0.6	chr2	98129009	98129181	(144064348)	C	MLT1A	LTR/ERVL-MaLR	(5)	369	188	2054582
42	2.3	2.3	0.0	chr2	98129182	98129225	(144064304)	+	(GA)n	Simple_repeat	1	45	(0)	2054583
779	20.7	5.8	1.0	chr2	98129226	98129246	(144064283)	C	MLT1A	LTR/ERVL-MaLR	(188)	202	182	2054582
60	13.4	4.3	0.8	chr2	98129260	98129375	(144064154)	+	GA-rich	Low_complexity	1	121	(0)	2054584
692	17.9	4.4	12.6	chr2	98129376	98129573	(144063956)	C	MLT1A	LTR/ERVL-MaLR	(191)	183	3	2054582
657	13.1	0.0	0.0	chr2	98129574	98129672	(144063857)	+	MER74A	LTR/ERVL	460	558	(0)	2054581
444	29.2	1.3	9.3	chr2	98269033	98269289	(143924240)	C	L1M3c	LINE/L1	(5007)	1134	899	2054773
482	34.4	5.2	4.7	chr2	98269474	98269836	(143923693)	C	L1M3c	LINE/L1	(5526)	605	241	2054773
213	35.4	6.6	10.2	chr2	99076887	99077122	(143116407)	+	L2a	LINE/L2	3087	3313	(74)	2055848
1016	16.1	0.0	0.0	chr2	99077128	99077301	(143116228)	C	AluSc8	SINE/Alu	(0)	311	139	2055851
216	30.9	10.5	0.0	chr2	99077302	99077369	(143116160)	+	L2a	LINE/L2	3351	3426	(0)	2055848
183	31.4	9.5	0.9	chr2	102226518	102226623	(139966906)	+	MIRb	SINE/MIR	40	155	(113)	2060805
45	28.3	2.5	3.9	chr2	102226625	102226822	(139966707)	+	GA-rich	Low_complexity	1	203	(0)	2060806
49	26.5	2.6	4.1	chr2	104325469	104325658	(137867871)	+	(CTCC)n	Simple_repeat	1	195	(0)	2063388
2256	12.0	0.0	0.3	chr2	104325694	104326002	(137867527)	C	AluSc	SINE/Alu	(1)	308	1	2063389
33	31.6	1.5	0.8	chr2	104854134	104854263	(137339266)	+	GA-rich	Low_complexity	1	132	(0)	2064065
13	19.2	2.2	4.3	chr2	104854390	104854434	(137339095)	+	(CACCTC)n	Simple_repeat	1	46	(0)	2064066
76	20.4	0.7	0.0	chr2	105125794	105125946	(137067583)	+	GA-rich	Low_complexity	1	154	(0)	2064435
61	22.5	2.4	1.8	chr2	105237906	105238070	(136955459)	+	GA-rich	Low_complexity	1	169	(0)	2064618
80	21.0	3.1	0.0	chr2	105807685	105807924	(136385605)	+	(TCTC)n	Simple_repeat	1	247	(0)	2065521
2006	12.4	1.4	0.0	chr2	105807925	105808197	(136385332)	C	AluSc	SINE/Alu	(32)	277	1	2065522
5010	18.8	4.3	0.2	chr2	108316549	108317524	(133876005)	+	L1PBa	LINE/L1	627	1644	(5219)	2069076
11076	11.9	9.6	5.2	chr2	108396650	108397294	(133796235)	C	MER4-int	LTR/ERV1	(4876)	1722	1053	2069181
3481	19.1	3.2	1.0	chr2	111570709	111571381	(130622148)	C	L1MB7	LINE/L1	(16)	6168	5481	2073705
177	17.1	0.6	1.2	chr2	111572808	111573141	(130620388)	+	GA-rich	Low_complexity	1	336	(0)	2073709
242	25.4	12.3	0.0	chr2	111573158	111573271	(130620258)	+	L2a	LINE/L2	783	912	(2507)	2073710
12	25.4	3.8	1.8	chr2	112138660	112138712	(130054817)	+	(TGCTCC)n	Simple_repeat	1	55	(0)	2074606
1869	22.9	3.8	0.7	chr2	113818360	113818768	(128374761)	+	MER76	LTR/ERVL	1	422	(269)	2077407
658	14.3	10.0	0.0	chr2	113818767	113818892	(128374637)	+	MER76	LTR/ERVL	552	691	(0)	2077407
459	20.6	5.6	1.0	chr2	113818898	113819000	(128374529)	+	L2a	LINE/L2	3315	3422	(4)	2077404
1357	20.2	5.2	6.0	chr2	113819165	113819532	(128373997)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	2077408
666	18.5	10.8	3.6	chr2	120725749	120725944	(121467585)	C	L1MC5	LINE/L1	(969)	8335	8124	2087475
957	23.7	3.1	3.1	chr2	120725952	120726309	(121467220)	C	MLT1A	LTR/ERVL-MaLR	(0)	408	53	2087480
3595	23.0	8.5	5.8	chr2	120726332	120727182	(121466347)	C	L1MC5	LINE/L1	(1185)	8119	7268	2087475
42	29.9	6.6	1.5	chr2	120741358	120741652	(121451877)	+	(CTCT)n	Simple_repeat	1	309	(0)	2087497
1729	15.2	8.7	0.0	chr2	121581903	121582184	(120611345)	+	AluSx1	SINE/Alu	3	311	(1)	2088910
100	34.2	1.4	3.5	chr2	121582185	121582665	(120610864)	+	GA-rich	Low_complexity	20	489	(0)	2088911
6749	10.8	3.4	3.4	chr2	123682171	123682613	(118510916)	+	HERVS71-int	LTR/ERV1	1	501	(8477)	2092093
102	1.0	2.0	0.0	chr2	123682614	123682711	(118510818)	+	(TC)n	Simple_repeat	1	100	(0)	2092094
6749	10.4	3.3	5.3	chr2	123682712	123683589	(118509940)	+	HERVS71-int	LTR/ERV1	502	1412	(7566)	2092093
1787	28.0	10.4	7.5	chr2	126989777	126990640	(115202889)	C	L1MDa	LINE/L1	(6043)	1451	561	2096697
2057	18.5	7.9	7.1	chr2	126990641	126991204	(115202325)	C	MER34A	LTR/ERV1	(0)	571	3	2096702
2652	14.6	5.6	10.8	chr2	127215147	127215587	(114977942)	+	L1MB7	LINE/L1	4738	5200	(946)	2097057
683	14.9	10.5	1.6	chr2	127215588	127215708	(114977821)	+	FLAM_C	SINE/Alu	1	133	(10)	2097064
4268	16.4	6.5	3.8	chr2	127215709	127216695	(114976834)	+	L1MB7	LINE/L1	5201	6177	(7)	2097057
1817	21.9	7.7	2.4	chr2	129805994	129806157	(112387372)	C	LTR44	LTR/ERV1	(356)	163	1	2100893
221	27.4	11.3	0.0	chr2	129806434	129806535	(112386994)	C	MIRb	SINE/MIR	(146)	122	8	2100895
1200	23.1	5.2	5.5	chr2	131094243	131094495	(111099034)	C	LTR24B	LTR/ERV1	(188)	388	131	2102813
2347	8.0	0.0	0.3	chr2	131094499	131094797	(111098732)	+	AluSg	SINE/Alu	5	302	(8)	2102815
37	14.4	0.0	0.0	chr2	131331836	131331899	(110861630)	+	(GGGA)n	Simple_repeat	1	64	(0)	2103177
1655	15.8	11.4	6.2	chr2	132382021	132382457	(109811072)	C	MER31B	LTR/ERV1	(3)	463	1	2104506
165	15.1	0.5	6.8	chr2	133647359	133647755	(108545774)	+	GA-rich	Low_complexity	1	399	(0)	2106236
558	27.5	2.4	4.6	chr2	133647764	133647819	(108545710)	+	L1MB1	LINE/L1	2544	2587	(4138)	2106234
26	0.0	0.0	0.0	chr2	133647820	133647844	(108545685)	+	(AGGGC)n	Simple_repeat	1	25	(0)	2106237
15586	16.5	4.0	2.6	chr2	133647845	133650592	(108542937)	+	L1MB1	LINE/L1	2588	5361	(1277)	2106234
249	16.0	1.3	17.6	chr2	133858237	133858327	(108335202)	+	L1M5	LINE/L1	5453	5528	(636)	2106564
77	22.1	0.6	0.0	chr2	133858389	133858553	(108334976)	+	GA-rich	Low_complexity	1	166	(0)	2106565
486	25.0	15.9	0.0	chr2	133858627	133858774	(108334755)	+	MER45A	DNA/hAT-Tip100	3	178	(0)	2106566
399	25.7	14.4	0.0	chr2	134119360	134119507	(108074022)	C	MIRb	SINE/MIR	(23)	239	67	2106958
44	15.1	0.0	0.0	chr2	136162487	136162562	(106030967)	+	G-rich	Low_complexity	1	76	(0)	2110253
1321	23.5	7.2	0.3	chr2	136162569	136162914	(106030615)	C	MER63D	DNA/hAT-Blackjack	(689)	372	1	2110254
164	9.4	8.0	0.3	chr2	139339639	139339950	(102853579)	+	GA-rich	Low_complexity	1	337	(0)	2114701
693	25.7	7.6	4.1	chr2	139858737	139859004	(102334525)	+	L1MB2	LINE/L1	7	284	(6323)	2115383
2016	26.5	7.3	3.6	chr2	139859045	139860157	(102333372)	+	L1MB2	LINE/L1	357	1843	(4906)	2115383
460	27.0	1.8	1.5	chr2	143836779	143836922	(98356607)	C	FLAM_C	SINE/Alu	(160)	141	1	2120557
135	12.7	0.4	1.7	chr2	143837039	143837267	(98356262)	+	(AGGG)n	Simple_repeat	1	230	(0)	2120558
1568	20.8	3.4	3.2	chr2	143845780	143846222	(98347307)	+	Ricksha_c	DNA/MULE-MuDR	355	848	(1200)	2120563
64	5.5	1.3	0.0	chr2	143846223	143846298	(98347231)	+	(TC)n	Simple_repeat	1	77	(0)	2120564
762	24.5	4.7	1.9	chr2	143846299	143846316	(98347213)	+	Ricksha_c	DNA/MULE-MuDR	849	865	(1183)	2120563
40	4.0	2.0	0.0	chr2	143846331	143846381	(98347148)	+	(AG)n	Simple_repeat	1	52	(0)	2120565
369	2.3	0.0	0.0	chr2	143846382	143846425	(98347104)	+	Ricksha_c	DNA/MULE-MuDR	862	905	(1143)	2120566
503	25.1	10.0	3.7	chr2	143846461	143846675	(98346854)	+	L2a	LINE/L2	3196	3425	(1)	2120562
84	26.4	1.4	0.5	chr2	143928251	143928468	(98265061)	+	GA-rich	Low_complexity	1	221	(0)	2120687
250	29.0	10.2	2.8	chr2	143928471	143928651	(98264878)	+	MLT1K	LTR/ERVL-MaLR	400	595	(0)	2120688
315	17.7	17.3	4.6	chr2	144369285	144369414	(97824115)	C	MamRep4096	DNA/hAT-Tip100	(276)	150	1	2121336
60	4.8	0.0	0.0	chr2	144369612	144369676	(97823853)	+	(CT)n	Simple_repeat	1	65	(0)	2121337
38	16.1	5.1	0.0	chr2	145202368	145202446	(96991083)	+	(TC)n	Simple_repeat	1	83	(0)	2122381
2222	12.5	0.3	0.3	chr2	145202493	145202803	(96990726)	C	AluSp	SINE/Alu	(1)	312	2	2122382
1006	26.4	8.5	6.5	chr2	145276210	145276715	(96916814)	+	L1ME1	LINE/L1	5825	6341	(11)	2122467
39	12.6	0.0	0.0	chr2	145276833	145276895	(96916634)	+	(AGAG)n	Simple_repeat	1	63	(0)	2122473
218	18.1	2.3	1.6	chr2	145819111	145819583	(96373946)	+	(CCTT)n	Simple_repeat	1	484	(0)	2123146
62	5.8	0.0	0.0	chr2	148021452	148021524	(94172005)	+	(TGC)n	Simple_repeat	1	73	(0)	2126017
22	10.2	4.8	0.0	chr2	148021578	148021619	(94171910)	+	(CTC)n	Simple_repeat	1	44	(0)	2126018
478	29.7	8.2	3.4	chr2	148623644	148623911	(93569618)	+	LTR33	LTR/ERVL	2	283	(232)	2126896
115	7.6	1.3	0.0	chr2	148623929	148624082	(93569447)	+	(TC)n	Simple_repeat	1	156	(0)	2126897
13	4.3	3.9	3.7	chr2	148624221	148624250	(93569279)	+	(AAACA)n	Simple_repeat	1	30	(0)	2126898
228	26.4	7.6	6.0	chr2	150472694	150472810	(91720719)	C	L2c	LINE/L2	(7)	3380	3262	2129410
47	18.6	0.0	0.0	chr2	150472985	150473073	(91720456)	+	(CCTC)n	Simple_repeat	1	89	(0)	2129411
174	14.7	4.4	4.0	chr2	152922900	152923333	(89270196)	+	(TTCCC)n	Simple_repeat	1	435	(0)	2133156
375	24.6	8.3	0.8	chr2	158293759	158293881	(83899648)	+	MLT1J	LTR/ERVL-MaLR	8	140	(372)	2139967
43	12.8	0.0	0.0	chr2	158293933	158294002	(83899527)	+	(CCTC)n	Simple_repeat	1	70	(0)	2139968
71	0.0	0.0	0.0	chr2	158294003	158294065	(83899464)	+	(TCCT)n	Simple_repeat	1	63	(0)	2139969
1921	24.4	4.4	9.9	chr2	158294074	158294557	(83898972)	C	L1ME1	LINE/L1	(173)	6006	5587	2139970
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
619	18.6	0.5	0.0	chr2	161281902	161282139	(80911390)	+	ACRO1	Satellite/acro	1	239	(5)	2144211
484	19.1	0.0	0.0	chr2	162089386	162089474	(80104055)	+	MER89	LTR/ERV1	1	89	(470)	2145216
1334	21.1	4.5	0.0	chr2	162089491	162089769	(80103760)	+	MER89	LTR/ERV1	268	559	(0)	2145216
1268	30.4	7.5	6.0	chr2	162933788	162934296	(79259233)	+	L1ME1	LINE/L1	30	559	(5988)	2146303
29	6.3	0.0	0.0	chr2	162934297	162934330	(79259199)	+	(TC)n	Simple_repeat	1	34	(0)	2146304
1268	30.4	7.5	6.0	chr2	162934331	162934454	(79259075)	+	L1ME1	LINE/L1	560	673	(5874)	2146303
3054	23.8	9.3	4.2	chr2	162934503	162936695	(79256834)	+	L1ME1	LINE/L1	4178	6491	(86)	2146303
33	23.1	1.2	2.3	chr2	163466777	163466862	(78726667)	+	(TC)n	Simple_repeat	1	87	(0)	2146999
22	9.5	2.9	0.0	chr2	163466866	163466899	(78726630)	+	(AC)n	Simple_repeat	1	35	(0)	2147000
15	0.0	0.0	7.4	chr2	163736336	163736362	(78457167)	+	(GGCC)n	Simple_repeat	1	27	(0)	2147386
1290	26.7	2.5	3.4	chr2	164417797	164418151	(77775378)	C	LTR40a	LTR/ERVL	(166)	353	2	2148269
197	17.0	0.0	6.0	chr2	164418154	164418203	(77775326)	+	L2a	LINE/L2	1643	1689	(1730)	2148266
241	19.5	0.0	0.0	chr2	164418214	164418254	(77775275)	+	L2	LINE/L2	2766	2806	(613)	2148270
3451	28.7	7.5	5.1	chr2	164418261	164418598	(77774931)	+	L2a	LINE/L2	1666	2001	(1418)	2148266
1880	18.6	1.1	1.6	chr2	164418599	164418965	(77774564)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	2148271
29	11.9	3.6	0.0	chr2	164425157	164425211	(77768318)	+	(CTCCCT)n	Simple_repeat	1	57	(0)	2148281
9955	16.6	0.4	0.7	chr2	165422326	165423952	(76769577)	C	MSTA-int	LTR/ERVL-MaLR	(9)	1622	1	2149639
19	9.8	0.0	2.9	chr2	166376052	166376086	(75817443)	+	(CCCT)n	Simple_repeat	1	35	(0)	2150940
24	6.6	0.0	0.0	chr2	166376221	166376252	(75817277)	+	(GT)n	Simple_repeat	1	32	(0)	2150941
98	5.8	2.4	0.0	chr2	169361307	169361431	(72832098)	+	(TC)n	Simple_repeat	1	128	(0)	2154844
3433	21.3	4.0	6.2	chr2	169764576	169764942	(72428587)	C	L1MC5	LINE/L1	(983)	8321	7967	2155550
265	28.2	1.2	5.6	chr2	169764949	169764966	(72428563)	C	SVA_A	Retroposon/SVA	(1174)	213	200	2155554
718	17.8	6.6	0.8	chr2	169764967	169765095	(72428434)	+	AluJo	SINE/Alu	1	137	(175)	2155555
293	17.8	2.7	1.4	chr2	169765107	169765180	(72428349)	+	L1MEg	LINE/L1	1665	1739	(4345)	2155556
275	19.2	16.1	0.0	chr2	169765205	169765282	(72428247)	C	HAL1M8	LINE/L1	(951)	2040	1948	2155557
29	15.3	0.0	0.0	chr2	169765283	169765335	(72428194)	+	(CTCT)n	Simple_repeat	1	53	(0)	2155558
48	0.0	0.0	0.0	chr2	169765339	169765379	(72428150)	+	(CA)n	Simple_repeat	1	41	(0)	2155559
1941	14.7	2.7	0.0	chr2	169765440	169765755	(72427774)	C	AluSz	SINE/Alu	(0)	312	1	2155560
229	28.1	1.5	0.0	chr2	173397855	173397918	(68795611)	C	MIR3	SINE/MIR	(28)	180	116	2161616
2947	25.8	11.1	5.1	chr2	173669708	173670967	(68522562)	C	MLT1G1-int	LTR/ERVL-MaLR	(144)	1345	1	2161993
787	27.9	4.1	2.9	chr2	173670972	173671211	(68522318)	C	MLT1G1	LTR/ERVL-MaLR	(4)	575	333	2161993
405	29.0	4.3	3.1	chr2	174888547	174888706	(67304823)	+	L1MB2	LINE/L1	245	406	(5907)	2163962
2168	23.2	6.5	1.9	chr2	174889179	174889851	(67303678)	+	L1MB2	LINE/L1	1089	1794	(4519)	2163962
1016	21.2	5.4	2.0	chr2	174968898	174969147	(67224382)	+	MER46C	DNA/TcMar-Tigger	80	338	(0)	2164090
536	23.4	0.0	0.0	chr2	174969171	174969281	(67224248)	+	L2a	LINE/L2	2797	2907	(512)	2164091
455	23.5	5.7	0.0	chr2	174969298	174969429	(67224100)	+	MER5A1	DNA/hAT-Charlie	27	166	(0)	2164092
998	25.6	14.1	2.2	chr2	174969447	174969850	(67223679)	+	L2a	LINE/L2	2915	3374	(52)	2164091
263	31.0	9.8	1.9	chr2	174996444	174996645	(67196884)	C	MIRc	SINE/MIR	(29)	239	1	2164141
717	26.9	14.0	1.7	chr2	174996654	174997146	(67196383)	+	L2a	LINE/L2	2844	3384	(3)	2164142
23	15.6	3.2	4.6	chr2	175005224	175005286	(67188243)	+	(GGC)n	Simple_repeat	1	65	(0)	2164159
31	0.0	0.0	0.0	chr2	176084422	176084450	(66109079)	+	(T)n	Simple_repeat	1	29	(0)	2165643
54	17.1	0.0	0.0	chr2	176084663	176084762	(66108767)	+	GA-rich	Low_complexity	1	100	(0)	2165644
18	28.0	2.9	4.7	chr2	176092724	176092826	(66100703)	+	GA-rich	Low_complexity	1	106	(0)	2165652
25	15.8	6.9	1.3	chr2	176092850	176092924	(66100605)	+	G-rich	Low_complexity	1	79	(0)	2165653
13	5.3	0.0	0.0	chr2	176092979	176092998	(66100531)	+	(CGG)n	Simple_repeat	1	20	(0)	2165654
36	4.9	0.0	0.0	chr2	176093058	176093099	(66100430)	+	(GGC)n	Simple_repeat	1	42	(0)	2165655
52	2.1	0.0	0.0	chr2	176136151	176136199	(66057330)	+	(AC)n	Simple_repeat	1	49	(0)	2165692
36	22.4	6.3	3.5	chr2	176136222	176136380	(66057149)	+	GA-rich	Low_complexity	1	169	(0)	2165693
415	26.4	14.8	0.8	chr2	177599591	177599795	(64593734)	+	MIR	SINE/MIR	3	246	(22)	2167841
11	24.5	2.2	2.2	chr2	177599933	177599977	(64593552)	+	(GCATTTT)n	Simple_repeat	1	46	(0)	2167842
1658	19.6	4.3	5.5	chr2	177600040	177600496	(64593033)	C	MER67C	LTR/ERV1	(2)	512	93	2167843
274	28.5	14.8	2.1	chr2	177652254	177652493	(64541036)	C	L2b	LINE/L2	(180)	3195	2920	2167903
431	26.3	0.0	2.6	chr2	177939192	177939308	(64254221)	+	L1MC5	LINE/L1	8556	8669	(635)	2168318
148	16.0	2.2	0.0	chr2	177939311	177939584	(64253945)	+	GA-rich	Low_complexity	1	280	(0)	2168319
566	20.2	5.1	0.8	chr2	177939585	177939714	(64253815)	+	L1MC5	LINE/L1	8670	8805	(499)	2168318
480	18.8	0.0	0.0	chr2	177939722	177939801	(64253728)	C	MER81	DNA/hAT-Blackjack	(29)	85	6	2168320
1489	19.2	4.8	0.0	chr2	179153962	179154216	(63039313)	+	AluJo	SINE/Alu	1	268	(44)	2169776
42	15.7	0.0	6.0	chr2	179154225	179154324	(63039205)	+	GA-rich	Low_complexity	1	100	(0)	2169777
1343	21.7	12.7	2.2	chr2	179154336	179154792	(63038737)	+	L1MC5	LINE/L1	8379	8890	(414)	2169778
4593	14.0	6.0	0.5	chr2	179460227	179461001	(62732528)	+	LTR8B	LTR/ERV1	1	820	(0)	2170205
2092	18.7	0.3	0.3	chr2	182242494	182242847	(59950682)	+	MLT2D	LTR/ERVL	2	355	(59)	2173691
60	4.1	4.0	0.0	chr2	182242852	182242926	(59950603)	+	(TC)n	Simple_repeat	1	78	(0)	2173692
22	3.6	3.5	0.0	chr2	182242927	182242955	(59950574)	+	(GT)n	Simple_repeat	1	30	(0)	2173693
9357	5.1	1.5	15.3	chr2	182385825	182387434	(59806095)	+	SVA_C	Retroposon/SVA	1	1384	(0)	2173883
1831	16.5	0.4	0.0	chr2	186190880	186191151	(56002378)	+	AluSz	SINE/Alu	5	277	(35)	2178732
73	17.5	3.0	2.3	chr2	186191156	186191324	(56002205)	+	GA-rich	Low_complexity	1	174	(0)	2178733
21	9.1	8.0	1.9	chr2	186191280	186191329	(56002200)	+	A-rich	Low_complexity	1	54	(0)	2178734
1454	20.4	6.4	18.6	chr2	186329836	186330383	(55863146)	+	MER67D	LTR/ERV1	42	513	(1)	2178900
18	20.2	3.9	0.0	chr2	186693990	186694040	(55499489)	+	(CTCCTC)n	Simple_repeat	1	53	(0)	2179447
13	18.3	2.6	2.5	chr2	186694092	186694138	(55499391)	+	(CGCCGCC)n	Simple_repeat	1	47	(0)	2179448
24	22.8	0.0	0.0	chr2	186694300	186694356	(55499173)	+	(CAG)n	Simple_repeat	1	57	(0)	2179449
2210	20.1	6.0	4.2	chr2	186852417	186852799	(55340730)	+	MER67D	LTR/ERV1	1	367	(147)	2179617
656	10.3	0.0	0.0	chr2	186852800	186852896	(55340633)	+	L1PA7	LINE/L1	6057	6153	(1)	2179618
2210	20.1	6.0	4.2	chr2	186852897	186853016	(55340513)	+	MER67D	LTR/ERV1	368	514	(0)	2179617
44	0.0	0.0	0.0	chr2	186862185	186862222	(55331307)	+	(GT)n	Simple_repeat	1	38	(0)	2179631
48	19.6	1.9	0.9	chr2	186862225	186862328	(55331201)	+	GA-rich	Low_complexity	1	106	(0)	2179632
526	22.4	2.2	0.2	chr2	186862338	186862472	(55331057)	+	L1MEh	LINE/L1	1384	1591	(916)	2179630
2241	9.2	0.7	0.0	chr2	187071770	187072053	(55121476)	+	AluSc8	SINE/Alu	1	286	(25)	2179928
47	15.4	0.0	0.0	chr2	187072061	187072142	(55121387)	+	GA-rich	Low_complexity	1	82	(0)	2179929
721	13.2	11.1	0.0	chr2	187072310	187072453	(55121076)	+	LTR54	LTR/ERV1	349	510	(0)	2179930
1886	14.4	1.0	0.0	chr2	187991575	187991879	(54201650)	+	L1PA16	LINE/L1	5857	6164	(2)	2181092
238	20.4	0.0	3.9	chr2	187991899	187991949	(54201580)	C	MER5B	DNA/hAT-Charlie	(5)	173	125	2181093
90	13.8	1.3	0.0	chr2	187991962	187992115	(54201414)	+	G-rich	Low_complexity	1	156	(0)	2181094
35	0.0	0.0	0.0	chr2	187992116	187992148	(54201381)	+	(AGGC)n	Simple_repeat	1	33	(0)	2181095
250	30.9	1.0	4.0	chr2	187992168	187992268	(54201261)	C	MER5B	DNA/hAT-Charlie	(80)	98	1	2181093
307	22.9	1.4	0.0	chr2	187992277	187992346	(54201183)	C	MER5A1	DNA/hAT-Charlie	(0)	166	96	2181096
298	15.1	0.0	0.0	chr2	188183166	188183218	(54010311)	C	MER67C	LTR/ERV1	(28)	486	434	2181309
389	16.4	1.4	1.4	chr2	188183245	188183318	(54010211)	C	MER44B	DNA/TcMar-Tigger	(6)	544	471	2181310
1430	18.2	5.2	10.3	chr2	188183330	188183611	(54009918)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	76	2181311
3131	27.1	17.4	5.0	chr2	190008772	190010493	(52183036)	C	L2a	LINE/L2	(96)	3330	1323	2183702
54	0.0	0.0	0.0	chr2	190880873	190880920	(51312609)	+	(GCA)n	Simple_repeat	1	48	(0)	2185068
1010	31.2	7.8	6.4	chr2	195146363	195147148	(47046381)	C	LTR82B	LTR/ERVL	(32)	798	1	2190522
969	26.4	0.8	0.8	chr2	195147240	195147480	(47046049)	+	L2b	LINE/L2	2220	2460	(959)	2190523
12	8.9	10.5	2.4	chr2	197675992	197676029	(44517500)	+	(CCTCT)n	Simple_repeat	1	42	(0)	2194467
58	19.3	0.8	0.8	chr2	197676041	197676169	(44517360)	+	GA-rich	Low_complexity	1	129	(0)	2194468
738	20.4	11.9	0.4	chr2	198184324	198184554	(44008975)	C	MLT1F	LTR/ERVL-MaLR	(4)	544	284	2195156
712	21.7	5.7	2.4	chr2	198184555	198184889	(44008640)	+	MER31B	LTR/ERV1	1	510	(4)	2195157
712	27.9	5.4	10.8	chr2	198184896	198185052	(44008477)	C	MLT1F	LTR/ERVL-MaLR	(262)	329	191	2195156
921	14.2	0.0	0.0	chr2	198185053	198185179	(44008350)	+	FLAM_C	SINE/Alu	2	128	(15)	2195158
14	10.0	0.0	7.9	chr2	200191721	200191758	(42001771)	+	(CCCTCT)n	Simple_repeat	1	38	(0)	2197956
346	29.5	9.2	0.8	chr2	200191955	200192084	(42001445)	C	LTR103_Mam	LTR/ERV1?	(281)	194	53	2197957
5844	24.0	4.2	4.1	chr2	201319750	201321986	(40871543)	+	L1PB3	LINE/L1	56	1692	(5224)	2199910
41	16.0	0.0	0.0	chr2	202050921	202050993	(40142536)	+	(CTCC)n	Simple_repeat	1	73	(0)	2201102
240	32.2	11.2	0.0	chr2	202050994	202051080	(40142449)	C	L2b	LINE/L2	(1)	3374	3277	2201103
16686	11.1	2.8	1.4	chr2	202710403	202713716	(39479813)	C	L1MA3	LINE/L1	(0)	7724	4369	2202574
15	23.6	6.7	0.0	chr2	203396806	203396865	(38796664)	+	(CTCCTG)n	Simple_repeat	1	64	(0)	2203922
2152	11.6	0.0	0.0	chr2	204460686	204460960	(37732569)	+	AluSz	SINE/Alu	1	275	(37)	2205653
4472	15.9	5.5	2.4	chr2	205823855	205824834	(36368695)	+	L1MB5	LINE/L1	5161	6174	(0)	2207448
850	15.7	0.0	0.0	chr2	205824843	205824963	(36368566)	+	AluJb	SINE/Alu	1	121	(191)	2207452
32	2.9	0.0	0.0	chr2	205824964	205824998	(36368531)	+	(GAGG)n	Simple_repeat	1	35	(0)	2207453
29	25.5	2.5	0.0	chr2	205825015	205825094	(36368435)	+	GA-rich	Low_complexity	1	82	(0)	2207454
911	22.6	0.0	0.0	chr2	205825097	205825264	(36368265)	+	AluJb	SINE/Alu	131	298	(14)	2207452
437	14.6	8.9	0.0	chr2	205880957	205880981	(36312548)	+	AluSz6	SINE/Alu	124	155	(157)	2207548
539	27.9	0.0	1.6	chr2	205880985	205881113	(36312416)	+	AluJb	SINE/Alu	186	312	(0)	2207550
157	20.4	0.0	5.5	chr2	205881117	205881519	(36312010)	+	GA-rich	Low_complexity	1	403	(0)	2207551
17	23.9	5.6	0.0	chr2	207165736	207165789	(35027740)	+	GA-rich	Low_complexity	1	57	(0)	2209617
16	24.0	0.0	0.0	chr2	207166018	207166052	(35027477)	+	(C)n	Simple_repeat	1	35	(0)	2209618
15	27.2	0.0	0.0	chr2	207166071	207166112	(35027417)	+	(TCC)n	Simple_repeat	1	42	(0)	2209619
12398	16.6	3.8	2.8	chr2	210112765	210115354	(32078175)	+	L1M4c	LINE/L1	45	2686	(3696)	2213952
245	29.7	9.9	1.7	chr2	210477360	210477479	(31716050)	C	L3b	LINE/CR1	(134)	5098	4968	2214396
220	35.1	4.7	9.4	chr2	210525444	210525931	(31667598)	C	L2c	LINE/L2	(0)	3387	2924	2214459
453	34.9	6.1	6.1	chr2	210526021	210526059	(31667470)	+	MIRb	SINE/MIR	2	29	(239)	2214460
2573	7.2	0.0	0.0	chr2	210526060	210526393	(31667136)	+	L1PA7	LINE/L1	5820	6153	(1)	2214461
18764	8.6	2.0	3.1	chr2	213406782	213411947	(28781582)	+	Harlequin-int	LTR/ERV1	1	7733	(4)	2218193
420	34.9	11.0	1.1	chr2	213799986	213800272	(28393257)	C	L3	LINE/CR1	(409)	3690	3372	2218715
1072	18.8	3.7	3.7	chr2	213800373	213800590	(28392939)	C	AluJr4	SINE/Alu	(10)	302	85	2218716
12	14.4	0.0	0.0	chr2	215640206	215640229	(26553300)	+	(TCCC)n	Simple_repeat	1	24	(0)	2221404
2343	13.7	10.1	0.5	chr2	215794356	215794774	(26398755)	+	MER31B	LTR/ERV1	3	466	(0)	2221658
45	6.0	0.0	0.0	chr2	215974802	215974853	(26218676)	+	(AC)n	Simple_repeat	1	52	(0)	2221934
23	17.4	0.0	0.0	chr2	215974854	215974899	(26218630)	+	(TCTCTC)n	Simple_repeat	1	46	(0)	2221935
19	9.1	5.4	2.6	chr2	215975000	215975036	(26218493)	+	(TA)n	Simple_repeat	1	39	(0)	2221936
939	22.5	5.3	14.1	chr2	216104744	216105141	(26088388)	C	MLT1A	LTR/ERVL-MaLR	(13)	361	1	2222191
17	14.2	0.0	0.0	chr2	216372298	216372328	(25821201)	+	(CCG)n	Simple_repeat	1	31	(0)	2222623
18	3.2	5.9	2.8	chr2	217858497	217858530	(24334999)	+	(GGAG)n	Simple_repeat	1	36	(0)	2225055
35	0.0	0.0	0.0	chr2	217858672	217858701	(24334828)	+	(AC)n	Simple_repeat	1	30	(0)	2225056
14	12.7	2.6	5.1	chr2	217858706	217858743	(24334786)	+	(CTCC)n	Simple_repeat	1	39	(0)	2225057
1328	18.4	13.0	1.9	chr2	218716995	218717261	(23476268)	C	AluJb	SINE/Alu	(10)	302	2	2226693
3264	20.8	5.6	3.6	chr2	218717262	218717363	(23476166)	C	Charlie1a	DNA/hAT-Charlie	(1363)	92	1	2226689
447	26.9	17.0	0.0	chr2	218806175	218806330	(23387199)	C	HAL1b	LINE/L1	(261)	2160	1973	2226847
855	23.3	4.1	0.5	chr2	218806332	218806542	(23386987)	+	MER20	DNA/hAT-Charlie	1	219	(0)	2226848
595	26.5	7.7	0.5	chr2	219997058	219997273	(22196256)	C	L2a	LINE/L2	(5)	3421	3189	2228849
248	19.7	1.4	3.5	chr2	220823410	220824002	(21369527)	+	(CCTT)n	Simple_repeat	1	601	(0)	2230123
34	0.0	0.0	0.0	chr2	222478268	222478296	(19715233)	+	(TG)n	Simple_repeat	1	29	(0)	2232665
154	24.4	2.4	2.4	chr2	225123119	225123572	(17069957)	+	(TTCC)n	Simple_repeat	1	465	(0)	2237059
364	29.6	6.6	5.5	chr2	226364427	226364680	(15828849)	C	MLT1K	LTR/ERVL-MaLR	(124)	471	215	2238820
16	0.0	0.0	0.0	chr2	226799140	226799157	(15394372)	+	(GC)n	Simple_repeat	1	18	(0)	2239465
13	22.4	0.0	4.4	chr2	226799274	226799318	(15394211)	+	(CGCCACC)n	Simple_repeat	1	45	(0)	2239466
33	7.2	0.0	0.0	chr2	226799349	226799392	(15394137)	+	(GCT)n	Simple_repeat	1	44	(0)	2239467
20	3.3	3.0	2.9	chr2	226799648	226799680	(15393849)	+	(CTC)n	Simple_repeat	1	34	(0)	2239468
372	28.3	8.4	0.8	chr2	227933803	227933923	(14259606)	+	MIR	SINE/MIR	12	142	(120)	2241390
1964	15.2	0.6	0.0	chr2	228347485	228347848	(13845681)	C	L1MB7	LINE/L1	(0)	6184	5832	2241952
121	33.0	2.0	1.7	chr2	228347849	228348273	(13845256)	+	(TTTC)n	Simple_repeat	4	427	(0)	2241953
1617	20.8	2.5	6.7	chr2	228417008	228417613	(13775916)	C	MLT2B3	LTR/ERVL	(40)	516	1	2242044
689	20.5	14.1	5.2	chr2	229672043	229672380	(12521149)	C	MLT1G1	LTR/ERVL-MaLR	(2)	589	199	2243910
45	29.0	1.9	6.5	chr2	229672384	229672644	(12520885)	+	GA-rich	Low_complexity	1	248	(0)	2243911
72	11.8	2.5	0.0	chr2	230224426	230224547	(11968982)	+	(AGAG)n	Simple_repeat	1	125	(0)	2244909
73	3.3	10.3	0.7	chr2	230943004	230943129	(11250400)	+	(AG)n	Simple_repeat	1	139	(0)	2245940
778	14.1	8.9	11.3	chr2	231015197	231015381	(11178148)	C	AluSx3	SINE/Alu	(131)	180	1	2246073
323	24.2	3.2	0.0	chr2	231831755	231831843	(10361686)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247712
351	23.2	2.0	2.0	chr2	231831871	231831971	(10361558)	+	MER20	DNA/hAT-Charlie	119	219	(0)	2247712
328	25.0	2.1	0.0	chr2	231831972	231832061	(10361468)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247712
364	22.7	1.1	0.0	chr2	231832103	231832190	(10361339)	+	MER20	DNA/hAT-Charlie	131	219	(0)	2247713
310	24.2	3.2	0.0	chr2	231832191	231832279	(10361250)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
268	25.3	2.2	0.0	chr2	231832282	231832368	(10361161)	+	MER20	DNA/hAT-Charlie	131	219	(0)	2247713
339	22.0	3.2	0.0	chr2	231832369	231832457	(10361072)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
326	23.1	3.2	0.0	chr2	231832458	231832546	(10360983)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
363	20.9	3.2	0.0	chr2	231832547	231832635	(10360894)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
331	23.9	2.1	0.0	chr2	231832636	231832725	(10360804)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
360	23.2	2.0	2.0	chr2	231832753	231832853	(10360676)	+	MER20	DNA/hAT-Charlie	119	219	(0)	2247713
366	20.9	3.2	0.0	chr2	231841760	231841848	(10351681)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247734
373	21.7	2.1	0.0	chr2	231841849	231841938	(10351591)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247734
341	22.0	3.2	0.0	chr2	231841939	231842027	(10351502)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247734
69	23.5	5.2	0.9	chr2	231869940	231870152	(10323377)	+	(TTCC)n	Simple_repeat	1	224	(0)	2247798
25	34.9	1.4	4.1	chr2	231870059	231870202	(10323327)	+	(CTTT)n	Simple_repeat	1	146	(0)	2247799
41	21.9	1.0	1.9	chr2	233771745	233771847	(8421682)	+	(TTCC)n	Simple_repeat	1	104	(0)	2250921
1269	19.6	0.9	0.0	chr2	233771918	233772142	(8421387)	+	AluJo	SINE/Alu	86	312	(0)	2250922
1180	20.2	2.0	0.0	chr2	234645169	234645410	(7548119)	C	L1MD1	LINE/L1	(8)	6234	5988	2252321
13	17.4	0.0	2.9	chr2	235501770	235501803	(6691726)	+	(TCCCCA)n	Simple_repeat	1	34	(0)	2253744
1012	17.3	0.0	0.0	chr2	236521502	236521657	(5671872)	+	AluJb	SINE/Alu	155	310	(2)	2255125
113	27.5	1.1	3.7	chr2	236521658	236521903	(5671626)	+	GA-rich	Low_complexity	1	239	(0)	2255126
473	21.3	0.9	2.1	chr2	236521904	236522008	(5671521)	C	L1ME3A	LINE/L1	(1244)	4902	4801	2255122
2623	21.9	8.2	0.0	chr2	236521987	236522703	(5670826)	C	L1ME3A	LINE/L1	(2200)	3946	3166	2255122
25	9.2	0.0	0.0	chr2	236856852	236856886	(5336643)	+	(A)n	Simple_repeat	1	35	(0)	2255599
68	23.4	5.7	0.5	chr2	236857071	236857280	(5336249)	+	(TC)n	Simple_repeat	1	222	(0)	2255600
1632	21.6	4.4	0.0	chr2	237556515	237556861	(4636668)	+	MLT2D	LTR/ERVL	1	363	(51)	2256515
164	14.1	3.6	0.0	chr2	237556862	237557165	(4636364)	+	(CTCT)n	Simple_repeat	1	315	(0)	2256516
265	17.5	0.0	13.6	chr2	237557171	237557236	(4636293)	+	MLT2D	LTR/ERVL	503	559	(0)	2256515
79	12.7	1.5	0.8	chr2	238853349	238853480	(3340049)	+	(AG)n	Simple_repeat	1	134	(0)	2258318
1966	23.1	0.2	0.1	chr20	60221	63215	(64380952)	+	(ATTCC)n	Simple_repeat	2	3000	(0)	2262201
8079	17.6	4.2	3.5	chr20	219502	221307	(64222860)	+	L1M1	LINE/L1	1680	3497	(4068)	2262410
109	16.3	1.4	2.2	chr20	221312	221533	(64222634)	+	G-rich	Low_complexity	1	225	(0)	2262411
5394	14.5	1.1	0.6	chr20	221534	222546	(64221621)	+	L1M1	LINE/L1	3462	4478	(3087)	2262410
2123	5.5	6.3	3.1	chr20	818790	819081	(63625086)	C	AluY	SINE/Alu	(9)	302	1	2263795
76	21.7	2.2	0.5	chr20	819239	819417	(63624750)	+	(TCTC)n	Simple_repeat	1	182	(0)	2263796
2071	6.4	0.8	0.4	chr20	819418	819668	(63624499)	C	AluSz6	SINE/Alu	(23)	289	38	2263797
443	31.6	4.5	3.6	chr20	952216	952466	(63491701)	C	MIRb	SINE/MIR	(3)	265	5	2264091
335	29.0	11.2	1.1	chr20	1416082	1416266	(63027901)	+	L2c	LINE/L2	2963	3168	(219)	2264955
773	30.3	6.2	3.5	chr20	1416450	1416904	(63027263)	+	L2c	LINE/L2	2918	3385	(2)	2264965
21	23.9	6.5	2.6	chr20	1895014	1895121	(62549046)	+	(GCTCCTC)n	Simple_repeat	1	115	(0)	2265848
27	29.1	5.4	0.0	chr20	1895074	1895185	(62548982)	+	(CT)n	Simple_repeat	1	118	(0)	2265849
13	5.2	0.0	0.0	chr20	1895284	1895303	(62548864)	+	(GCG)n	Simple_repeat	1	20	(0)	2265850
5285	17.5	3.0	1.4	chr20	2511783	2512803	(61931364)	+	L1MB5	LINE/L1	4004	5138	(1008)	2267091
6447	8.6	3.9	34.5	chr20	3125133	3126524	(61317643)	+	SVA_A	Retroposon/SVA	421	1387	(0)	2268252
16	13.7	0.0	0.0	chr20	3126526	3126550	(61317617)	+	(A)n	Simple_repeat	1	25	(0)	2268253
33	32.1	2.6	4.6	chr20	3126551	3126717	(61317450)	+	A-rich	Low_complexity	2	189	(0)	2268254
2498	9.1	0.0	0.0	chr20	3126754	3127062	(61317105)	+	AluSq2	SINE/Alu	1	309	(4)	2268255
19	30.4	3.2	3.1	chr20	3471226	3471286	(60972881)	+	(GGCCGC)n	Simple_repeat	1	61	(0)	2268953
29	8.5	1.9	1.9	chr20	3471287	3471339	(60972828)	+	(GCT)n	Simple_repeat	1	54	(0)	2268954
19	30.4	3.2	3.1	chr20	3471340	3471401	(60972766)	+	(GGCCGC)n	Simple_repeat	2	63	(0)	2268955
253	35.9	4.9	10.6	chr20	4482619	4483092	(59961075)	+	L2b	LINE/L2	2923	3368	(7)	2270812
890	16.2	7.5	0.0	chr20	5205163	5205402	(59238765)	C	L1MC4	LINE/L1	(0)	8042	7683	2272205
343	27.8	8.3	7.1	chr20	5205570	5205724	(59238443)	+	MIRb	SINE/MIR	1	157	(111)	2272206
52	2.0	0.0	0.0	chr20	6635291	6635342	(57808825)	+	(CTTCCTTC)n	Simple_repeat	1	52	(0)	2274693
443	31.8	3.8	1.7	chr20	6635364	6635542	(57808625)	+	MIR3	SINE/MIR	20	202	(6)	2274694
81	13.1	3.9	0.6	chr20	6841254	6841408	(57602759)	+	GA-rich	Low_complexity	1	161	(0)	2275032
150	8.0	2.3	0.0	chr20	8018261	8018528	(56425639)	+	(GA)n	Simple_repeat	1	274	(0)	2276652
647	31.1	8.9	4.9	chr20	9554846	9555210	(54888957)	+	L2a	LINE/L2	3044	3424	(2)	2279065
511	31.9	14.7	6.7	chr20	10390813	10391046	(54053121)	+	L2	LINE/L2	2329	2559	(860)	2280471
1753	17.9	3.2	0.0	chr20	10391047	10391348	(54052819)	C	AluJo	SINE/Alu	(0)	312	1	2280476
24	3.6	0.0	0.0	chr20	11267661	11267689	(53176478)	+	(TG)n	Simple_repeat	1	29	(0)	2281735
188	23.4	0.0	6.0	chr20	11267700	11267749	(53176418)	+	L3	LINE/CR1	4021	4067	(32)	2281736
917	27.6	9.7	2.6	chr20	11267798	11268180	(53175987)	+	MLT1H	LTR/ERVL-MaLR	10	422	(127)	2281737
2251	11.7	0.0	0.0	chr20	11275335	11275633	(53168534)	+	AluSx1	SINE/Alu	1	299	(13)	2281750
153	27.8	1.3	4.2	chr20	11275639	11276180	(53167987)	+	(TTCC)n	Simple_repeat	1	549	(0)	2281751
1541	14.3	2.2	7.8	chr20	11823406	11823792	(52620375)	+	MER67C	LTR/ERV1	6	405	(306)	2282542
271	25.3	1.3	0.0	chr20	11823855	11823929	(52620238)	+	MER67C	LTR/ERV1	433	508	(6)	2282542
134	31.5	3.5	1.5	chr20	15639791	15640367	(48803800)	+	GA-rich	Low_complexity	1	597	(0)	2288180
1743	19.3	2.3	0.7	chr20	16152505	16152805	(48291362)	+	AluJo	SINE/Alu	1	306	(6)	2288940
106	17.4	3.6	1.9	chr20	16152806	16153043	(48291124)	+	GA-rich	Low_complexity	13	254	(0)	2288941
23	43.5	1.3	2.0	chr20	16152934	16153084	(48291083)	+	G-rich	Low_complexity	1	153	(0)	2288942
9170	14.8	2.2	1.9	chr20	16153085	16154869	(48289298)	+	L1MC1	LINE/L1	3859	5650	(914)	2288935
284	29.0	3.1	5.5	chr20	16171111	16171274	(48272893)	+	L2a	LINE/L2	3253	3412	(14)	2288971
23	44.9	2.4	0.6	chr20	16171281	16171445	(48272722)	+	GA-rich	Low_complexity	1	169	(0)	2288972
632	29.3	5.5	0.5	chr20	16171529	16171734	(48272433)	C	MIRb	SINE/MIR	(32)	236	20	2288973
33	0.0	0.0	0.0	chr20	17433786	17433813	(47010354)	+	(TC)n	Simple_repeat	1	28	(0)	2290858
184	19.4	4.4	1.1	chr20	17433826	17434280	(47009887)	+	(TC)n	Simple_repeat	1	475	(0)	2290858
1047	17.4	0.0	0.6	chr20	18072054	18072220	(46371947)	C	FAM	SINE/Alu	(19)	166	1	2292048
88	6.1	1.6	1.6	chr20	18072283	18072407	(46371760)	+	(TCCC)n	Simple_repeat	1	127	(0)	2292049
29	20.3	4.2	0.0	chr20	18072408	18072479	(46371688)	+	(TCCT)n	Simple_repeat	1	75	(0)	2292050
2036	13.8	1.4	0.0	chr20	18072480	18072770	(46371397)	C	AluSx3	SINE/Alu	(15)	296	2	2292051
3120	26.5	7.3	3.2	chr20	18975940	18977258	(45466909)	C	L1MEf	LINE/L1	(3482)	3459	2094	2293490
31	12.3	1.8	0.0	chr20	20362795	20362849	(44081318)	+	(AGAG)n	Simple_repeat	1	56	(0)	2295535
248	21.7	6.5	0.0	chr20	20827874	20827988	(43616179)	C	LTR16B2	LTR/ERVL	(65)	397	275	2296158
20	19.0	4.6	2.9	chr20	20827989	20828053	(43616114)	+	GA-rich	Low_complexity	1	68	(0)	2296159
1169	22.8	7.9	7.4	chr20	20828054	20828418	(43615749)	C	LTR16B2	LTR/ERVL	(78)	384	18	2296160
911	31.3	4.7	0.3	chr20	22438949	22439291	(42004876)	+	LTR16C	LTR/ERVL	100	458	(31)	2298422
125	13.6	1.5	0.0	chr20	22513109	22513314	(41930853)	+	(CT)n	Simple_repeat	1	209	(0)	2298512
249	23.0	2.1	2.1	chr20	22834595	22835249	(41608918)	+	(TCCT)n	Simple_repeat	1	669	(0)	2298925
289	39.4	4.0	6.9	chr20	22835250	22835554	(41608613)	C	L2b	LINE/L2	(9)	3366	3071	2298926
525	20.2	13.9	1.7	chr20	23335053	23335228	(41108939)	+	LTR16	LTR/ERVL	238	438	(0)	2299565
18	3.6	3.3	0.0	chr20	23335315	23335329	(41108838)	+	(AGT)n	Simple_repeat	1	16	(0)	2299566
36	6.8	0.0	0.0	chr20	23335330	23335376	(41108791)	+	(AGC)n	Simple_repeat	1	47	(0)	2299567
18	3.6	3.3	0.0	chr20	23335377	23335390	(41108777)	+	(AGT)n	Simple_repeat	2	15	(0)	2299568
14	15.4	5.6	0.0	chr20	25057940	25057975	(39386192)	+	(GCT)n	Simple_repeat	1	38	(0)	2301646
274	33.3	7.0	4.3	chr20	25603133	25603339	(38840828)	+	LTR78	LTR/ERV1	93	305	(999)	2302459
836	18.9	0.0	0.0	chr20	25603660	25603791	(38840376)	+	FLAM_C	SINE/Alu	2	133	(10)	2302460
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
8063	19.7	6.6	2.5	chr20	28563436	28564716	(35879451)	C	LTR53-int	LTR/ERVL	(127)	3202	1859	2303595
1854	17.6	0.0	0.7	chr20	28564717	28565012	(35879155)	+	AluJo	SINE/Alu	1	294	(18)	2303596
8063	19.7	6.6	2.5	chr20	28565013	28565466	(35878701)	C	LTR53-int	LTR/ERVL	(1471)	1858	1390	2303595
905	23.6	7.0	4.8	chr20	28618258	28618602	(35825565)	C	MER67C	LTR/ERV1	(3)	511	173	2303669
274	24.0	1.3	1.3	chr20	29319759	29319834	(35124333)	C	LSAU	Satellite	(0)	498	423	2304002
342	30.0	2.7	1.1	chr20	29319860	29320041	(35124126)	C	LSAU	Satellite	(172)	326	142	2304002
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
858	24.0	7.3	4.6	chr20	29512751	29513094	(34931073)	C	MER67C	LTR/ERV1	(3)	511	173	2304217
350	31.1	2.1	1.1	chr20	29762685	29762869	(34681298)	C	LSAU	Satellite	(171)	327	141	2304527
70	30.7	0.0	0.5	chr20	29762909	29763126	(34681041)	+	G-rich	Low_complexity	1	218	(0)	2304528
33	16.5	5.8	2.2	chr20	29883919	29884004	(34560163)	+	(CA)n	Simple_repeat	1	91	(0)	2304632
4407	13.3	1.5	1.4	chr20	29884017	29884750	(34559417)	C	LTR5_Hs	LTR/ERVK	(0)	968	234	2304633
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1257	25.2	0.7	0.3	chr20	30502161	30504618	(33939549)	+	GA-rich	Low_complexity	642	3106	(0)	2305065
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
4636	22.9	5.1	7.7	chr20	30625824	30628238	(33815929)	C	L1PA13	LINE/L1	(3745)	3021	486	2305284
24	25.2	2.7	1.3	chr20	31514352	31514424	(32929743)	+	(GC)n	Simple_repeat	1	75	(0)	2306155
2297	11.2	0.7	0.3	chr20	32939278	32939581	(31504586)	C	AluSx3	SINE/Alu	(5)	306	2	2309615
68	38.8	3.7	0.2	chr20	32939582	32939695	(31504472)	+	(TCTC)n	Simple_repeat	3	120	(0)	2309616
2322	10.1	0.7	0.0	chr20	32939696	32939991	(31504176)	C	AluSx1	SINE/Alu	(11)	301	4	2309617
358	32.3	11.3	5.5	chr20	33153165	33153597	(31290570)	+	L2c	LINE/L2	2916	3376	(11)	2310059
17	18.9	2.5	2.4	chr20	33562324	33562385	(30881782)	+	GA-rich	Low_complexity	1	62	(0)	2311081
1810	14.6	0.4	0.4	chr20	34029192	34029459	(30414708)	+	AluSx1	SINE/Alu	37	304	(8)	2312173
48	2.0	0.0	1.9	chr20	34029460	34029512	(30414655)	+	(GGAG)n	Simple_repeat	1	53	(0)	2312174
1137	21.6	5.2	7.8	chr20	35081089	35081230	(29362937)	+	L1MEg	LINE/L1	2053	2190	(3956)	2314459
1594	20.8	1.8	1.8	chr20	35081231	35081514	(29362653)	+	AluJb	SINE/Alu	1	284	(28)	2314460
40	2.1	0.0	3.9	chr20	35081515	35081565	(29362602)	+	(AAAAT)n	Simple_repeat	1	51	(0)	2314461
3370	20.8	8.3	7.9	chr20	35571451	35572055	(28872112)	+	L1M4b	LINE/L1	803	1480	(5387)	2315581
17	15.8	2.3	2.2	chr20	36051058	36051101	(28393066)	+	(GGAGTGG)n	Simple_repeat	1	45	(0)	2316726
996	25.4	13.8	2.6	chr20	36051234	36051650	(28392517)	C	L2a	LINE/L2	(0)	3426	2956	2316727
431	30.5	0.0	0.8	chr20	36051671	36051799	(28392368)	C	L2a	LINE/L2	(648)	2771	2644	2316727
468	29.4	7.6	7.1	chr20	36051816	36052360	(28391807)	C	L2-3_Crp	LINE/L2	(864)	1232	841	2316728
1074	21.2	18.6	1.6	chr20	37322832	37323214	(27120953)	+	L2	LINE/L2	2517	2979	(440)	2319729
29	2.8	0.0	4.9	chr20	37424407	37424447	(27019720)	+	(AGAGAGAC)n	Simple_repeat	1	41	(0)	2320010
1354	30.9	8.2	5.8	chr20	38043014	38043998	(26400169)	C	L2a	LINE/L2	(5)	3421	2312	2321310
2277	20.0	9.1	4.1	chr20	38044004	38044372	(26399795)	C	MER68	LTR/ERVL	(2)	561	182	2321311
55	16.0	0.9	0.9	chr20	41636035	41636141	(22808026)	+	GA-rich	Low_complexity	1	108	(0)	2327835
397	34.5	5.5	1.8	chr20	41840615	41841052	(22603115)	+	L2c	LINE/L2	2701	3159	(228)	2328192
14	4.5	0.0	4.0	chr20	41841091	41841115	(22603052)	+	(AACC)n	Simple_repeat	1	25	(0)	2328193
184	22.0	0.0	0.0	chr20	41841110	41841487	(22602680)	+	(CCTC)n	Simple_repeat	1	378	(0)	2328194
1000	23.7	10.9	3.8	chr20	41841532	41841890	(22602277)	C	L1ME3	LINE/L1	(107)	6055	5666	2328195
260	22.8	14.6	3.9	chr20	43095293	43095420	(21348747)	C	MIR	SINE/MIR	(71)	191	48	2330428
226	24.9	4.5	0.8	chr20	43095553	43096246	(21347921)	+	(CT)n	Simple_repeat	1	725	(0)	2330429
209	24.7	16.0	0.0	chr20	43448004	43448092	(20996075)	+	L3	LINE/CR1	3601	3706	(393)	2331187
1128	14.5	3.0	3.3	chr20	43448103	43448342	(20995825)	C	THE1D	LTR/ERVL-MaLR	(0)	465	185	2331188
109	12.7	0.6	0.6	chr20	43448343	43448520	(20995647)	+	(AGGG)n	Simple_repeat	1	179	(0)	2331189
97	21.8	0.0	0.0	chr20	43448521	43448541	(20995626)	+	GA-rich	Low_complexity	1	199	(0)	2331190
1051	10.0	9.9	3.5	chr20	43448544	43448740	(20995427)	C	THE1D	LTR/ERVL-MaLR	(170)	211	1	2331188
465	33.0	9.4	3.4	chr20	43448743	43449093	(20995074)	+	L3	LINE/CR1	3715	4088	(11)	2331187
41	7.0	1.7	0.0	chr20	43769160	43769219	(20674948)	+	(AGGG)n	Simple_repeat	1	61	(0)	2331942
4030	16.4	3.2	0.0	chr20	44829602	44830058	(19614109)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(230)	838	377	2334449
1046	20.7	0.0	0.0	chr20	44830062	44830240	(19613927)	C	AluJr	SINE/Alu	(5)	307	129	2334451
315	19.2	2.4	1.9	chr20	45211431	45212146	(19232021)	+	GA-rich	Low_complexity	1	733	(0)	2335179
32	12.9	0.0	0.0	chr20	45600301	45600359	(18843808)	+	(GT)n	Simple_repeat	1	59	(0)	2335964
303	29.6	15.5	3.0	chr20	45600444	45600645	(18843522)	C	LTR103b_Mam	LTR/ERV1?	(69)	479	248	2335965
38	9.9	0.0	0.0	chr20	45600657	45600711	(18843456)	+	(TC)n	Simple_repeat	1	55	(0)	2335966
10137	2.7	0.1	23.6	chr20	45645020	45646831	(18797336)	C	SVA_D	Retroposon/SVA	(0)	1386	1	2336021
4662	21.0	18.3	5.5	chr20	45646832	45648179	(18795988)	C	L1MA8	LINE/L1	(5058)	2431	848	2336015
30	3.1	0.0	0.0	chr20	46111445	46111477	(18332690)	+	(TCCACT)n	Simple_repeat	1	33	(0)	2336950
428	20.4	1.8	8.4	chr20	46111482	46111607	(18332560)	C	MLT1F1	LTR/ERVL-MaLR	(265)	304	181	2336949
176	8.9	8.5	0.0	chr20	46111613	46111941	(18332226)	+	GA-rich	Low_complexity	1	357	(0)	2336951
566	25.0	7.7	9.3	chr20	46111917	46111976	(18332191)	C	MLT1F1	LTR/ERVL-MaLR	(339)	221	167	2336949
742	20.6	0.8	0.8	chr20	46111981	46112111	(18332056)	C	AluJr4	SINE/Alu	(181)	131	1	2336952
55	16.6	1.7	2.5	chr20	48329288	48329406	(16114761)	+	GA-rich	Low_complexity	1	121	(0)	2341900
238	26.5	5.7	2.4	chr20	48523333	48523417	(15920750)	+	UCON12	Unknown	424	511	(9)	2342279
787	26.3	11.7	8.0	chr20	48958742	48959159	(15485008)	C	Charlie8	DNA/hAT-Charlie	(2000)	428	1	2343293
230	20.8	1.9	0.0	chr20	48959292	48959344	(15484823)	C	MIR3	SINE/MIR	(2)	206	153	2343295
126	17.4	0.0	0.9	chr20	48959391	48959622	(15484545)	+	(CCCT)n	Simple_repeat	1	232	(0)	2343296
1808	15.0	3.5	0.4	chr20	48959624	48959896	(15484271)	C	AluJb	SINE/Alu	(26)	286	5	2343297
2276	10.2	0.3	0.0	chr20	50744103	50744407	(13699760)	C	AluSp	SINE/Alu	(1)	312	7	2347622
619	30.1	11.2	6.7	chr20	50744408	50745057	(13699110)	+	L2c	LINE/L2	2730	3381	(6)	2347621
1011	24.9	12.8	5.1	chr20	51221269	51222061	(13222106)	C	L2a	LINE/L2	(2)	3424	2567	2348686
530	22.5	3.2	3.7	chr20	52104523	52104739	(12339428)	+	L2a	LINE/L2	2960	3175	(251)	2350767
495	28.1	2.3	2.8	chr20	52515716	52515891	(11928276)	C	LTR16B2	LTR/ERVL	(0)	462	288	2351672
108	18.2	0.4	2.6	chr20	52515895	52516123	(11928044)	+	GA-rich	Low_complexity	1	230	(0)	2351673
771	28.5	5.3	1.7	chr20	52516126	52516414	(11927753)	C	LTR16B2	LTR/ERVL	(152)	310	11	2351672
34	4.6	4.4	0.0	chr20	52986893	52986937	(11457230)	+	(TG)n	Simple_repeat	1	47	(0)	2352561
812	24.9	8.9	5.1	chr20	52986938	52986983	(11457184)	+	MER113	DNA/hAT-Charlie	449	500	(21)	2352558
328	28.2	3.3	8.6	chr20	52987225	52987352	(11456815)	C	MER5A	DNA/hAT-Charlie	(1)	188	68	2352562
73	6.2	3.9	0.0	chr20	52987445	52987547	(11456620)	+	(CT)n	Simple_repeat	1	107	(0)	2352563
73	13.5	0.0	0.0	chr20	53084623	53084740	(11359427)	+	(CTCC)n	Simple_repeat	1	118	(0)	2352757
330	27.7	1.1	1.1	chr20	53084921	53085015	(11359152)	+	MIRc	SINE/MIR	75	169	(99)	2352758
1914	16.6	0.0	0.3	chr20	53503408	53503696	(10940471)	+	AluJb	SINE/Alu	1	288	(24)	2353595
68	23.1	0.7	0.0	chr20	53503697	53503838	(10940329)	+	GA-rich	Low_complexity	13	155	(0)	2353596
28113	2.2	0.1	0.0	chr20	53503852	53509874	(10934293)	+	L1PA2	LINE/L1	127	6153	(2)	2353597
303	23.3	0.0	6.5	chr20	53743766	53743857	(10700310)	C	L2a	LINE/L2	(5)	3421	3336	2354233
184	27.8	1.4	6.5	chr20	53743994	53744070	(10700097)	C	L2a	LINE/L2	(256)	3119	3047	2354233
54	4.8	0.0	1.5	chr20	53744074	53744140	(10700027)	+	(CCTC)n	Simple_repeat	1	67	(0)	2354234
12	9.7	0.0	0.0	chr20	53744141	53744162	(10700005)	+	(CCTG)n	Simple_repeat	1	22	(0)	2354235
1422	16.1	0.0	0.5	chr20	53744163	53744380	(10699787)	C	AluJb	SINE/Alu	(11)	301	85	2354236
1018	22.8	10.5	2.7	chr20	57754093	57754389	(6689778)	C	L1ME3	LINE/L1	(1)	6161	5839	2361732
83	24.5	2.5	1.6	chr20	57754403	57754583	(6689584)	+	(CTCC)n	Simple_repeat	1	183	(0)	2361733
2057	11.0	0.4	0.4	chr20	57754584	57754856	(6689311)	C	AluSx	SINE/Alu	(39)	273	1	2361734
173	28.0	1.9	1.1	chr20	58375007	58375530	(6068637)	+	(CT)n	Simple_repeat	1	534	(0)	2362822
239	22.1	7.2	0.4	chr20	59355432	59356168	(5087999)	+	(CT)n	Simple_repeat	1	790	(0)	2364312
1989	14.2	8.0	0.9	chr20	61029163	61029510	(3414657)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2366837
59	27.1	3.7	0.5	chr20	61262737	61262924	(3181243)	+	(TTCC)n	Simple_repeat	1	195	(0)	2367152
19	0.0	0.0	0.0	chr20	61262965	61262985	(3181182)	+	(GA)n	Simple_repeat	1	21	(0)	2367153
487	25.5	11.3	1.3	chr20	61743964	61744122	(2700045)	+	MER45A	DNA/hAT-Tip100	1	177	(1)	2367707
132	27.8	2.3	0.5	chr20	61744219	61744611	(2699556)	+	GA-rich	Low_complexity	1	402	(0)	2367708
14	28.9	0.0	3.5	chr20	61744567	61744624	(2699543)	+	(GACA)n	Simple_repeat	1	58	(0)	2367709
242	18.2	6.8	0.0	chr20	62083227	62083281	(2360886)	C	L1M2	LINE/L1	(778)	5513	5455	2368090
350	20.0	6.2	1.1	chr20	62083293	62083383	(2360784)	C	L1MB3	LINE/L1	(40)	6143	6048	2368091
377	14.3	0.0	0.0	chr20	62083384	62083439	(2360728)	C	AluSz6	SINE/Alu	(12)	300	245	2368092
967	20.4	9.5	2.9	chr20	62083599	62083905	(2360262)	+	MLT2B3	LTR/ERVL	385	717	(0)	2368093
11	16.4	5.9	0.0	chr20	62451251	62451284	(1992883)	+	(CCACCT)n	Simple_repeat	1	36	(0)	2368585
325	23.9	2.8	0.5	chr20	62451527	62452348	(1991819)	+	GA-rich	Low_complexity	1	845	(0)	2368586
71	25.3	3.1	0.0	chr20	62733606	62733800	(1710367)	+	GA-rich	Low_complexity	1	201	(0)	2368886
457	18.3	1.8	0.4	chr20	62755054	62755983	(1688184)	+	(CTCC)n	Simple_repeat	1	947	(0)	2368908
136	14.2	0.9	0.0	chr20	63101557	63101782	(1342385)	+	(TCTCTC)n	Simple_repeat	1	228	(0)	2369269
20	28.9	0.0	0.0	chr20	63101843	63101894	(1342273)	+	(TG)n	Simple_repeat	1	52	(0)	2369270
81	21.6	1.4	3.2	chr20	63653429	63653646	(790521)	+	G-rich	Low_complexity	1	221	(0)	2369848
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
2828	18.2	1.6	1.8	chr21	7942700	7957766	(38752217)	+	(CATTC)n	Satellite	1	15309	(0)	2373121
797	22.4	0.5	0.1	chr21	8229975	8230765	(38479218)	+	(TCTC)n	Simple_repeat	2	795	(0)	2373327
446	20.9	0.1	6.5	chr21	8230776	8230919	(38479064)	+	MER39B	LTR/ERV1	298	454	(253)	2373328
1247	22.8	0.6	0.2	chr21	8232546	8235312	(38474671)	+	(TCTC)n	Simple_repeat	1	2784	(0)	2373335
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
785	22.6	0.5	0.1	chr21	8455261	8456884	(38253099)	+	(TCTC)n	Simple_repeat	1	1629	(0)	2373669
560	22.7	0.5	0.2	chr21	8464121	8465014	(38244969)	+	(CTCT)n	Simple_repeat	1	897	(0)	2373686
53	2.0	0.0	0.0	chr21	8465015	8465064	(38244919)	+	(GT)n	Simple_repeat	1	50	(0)	2373687
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
800	10.7	0.6	0.5	chr21	9096388	9100565	(37609418)	+	CER	Satellite	1	4180	(0)	2374227
2188	10.9	1.3	0.0	chr21	9149811	9150104	(37559879)	C	AluSp	SINE/Alu	(15)	298	1	2374290
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
1263	30.4	12.1	1.4	chr21	9257066	9257711	(37452272)	C	L2	LINE/L2	(1779)	1640	916	2374355
271	36.9	7.0	1.8	chr21	9259444	9259672	(37450311)	+	MIRb	SINE/MIR	27	268	(0)	2374358
816	22.1	17.8	2.3	chr21	9758772	9759336	(36950647)	C	LTR50	LTR/ERVL	(8)	787	8	2374814
1683	29.2	6.3	6.8	chr21	9810881	9812152	(36897831)	C	SST1	Satellite/centr	(14)	1549	284	2374881
19	33.9	0.0	1.2	chr21	9812172	9812228	(36897755)	+	(GACA)n	Simple_repeat	1	86	(0)	2374882
18	10.4	0.0	0.0	chr21	9812229	9812259	(36897724)	+	(ACACAC)n	Simple_repeat	1	31	(0)	2374883
1892	29.2	5.1	6.4	chr21	9812264	9813560	(36896423)	C	SST1	Satellite/centr	(1)	1562	284	2374884
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
21	16.7	0.0	2.4	chr21	9819273	9819314	(36890669)	+	(AC)n	Simple_repeat	1	42	(0)	2374898
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
291	14.6	3.7	0.5	chr21	10378635	10379195	(36330788)	+	(CT)n	Simple_repeat	1	582	(0)	2375433
1986	10.7	4.1	2.8	chr21	10403491	10403780	(36306203)	C	AluSg4	SINE/Alu	(16)	294	1	2375487
398	8.6	0.2	0.0	chr21	10426491	10427038	(36282945)	+	(GTGGTG)n	Simple_repeat	1	549	(0)	2375540
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
1995	15.1	1.0	1.0	chr21	10477787	10478098	(36231885)	C	AluSx	SINE/Alu	(0)	312	1	2375619
601	28.4	13.7	10.9	chr21	16978674	16979223	(29730760)	+	LTR41	LTR/ERVL	201	768	(0)	2381076
855	23.9	18.2	2.0	chr21	18569980	18570575	(28139408)	C	LTR50	LTR/ERVL	(2)	793	4	2383225
14725	5.2	1.2	3.8	chr21	26855186	26857100	(19852883)	+	HERV17-int	LTR/ERV1	1	1865	(6761)	2394592
33	18.9	1.4	0.0	chr21	29261464	29261532	(17448451)	+	GA-rich	Low_complexity	1	70	(0)	2398029
29	0.0	0.0	0.0	chr21	30725133	30725157	(15984826)	+	(AC)n	Simple_repeat	1	25	(0)	2400157
108	20.3	6.8	0.6	chr21	30725158	30725466	(15984517)	+	GA-rich	Low_complexity	1	330	(0)	2400158
1706	21.1	6.1	0.3	chr21	30725469	30725838	(15984145)	C	MLT2D	LTR/ERVL	(19)	395	3	2400159
33	17.4	1.4	1.4	chr21	31732160	31732232	(14977751)	+	(CGCCC)n	Simple_repeat	1	74	(0)	2401953
12	15.7	2.6	5.0	chr21	31732235	31732273	(14977710)	+	G-rich	Low_complexity	1	40	(0)	2401954
19	15.1	4.5	0.0	chr21	31732278	31732321	(14977662)	+	(CGG)n	Simple_repeat	1	46	(0)	2401955
45	5.2	1.6	1.6	chr21	31761061	31761123	(14948860)	+	(CCTT)n	Simple_repeat	1	64	(0)	2402022
44	20.8	0.0	0.0	chr21	31761124	31761210	(14948773)	+	(TCTC)n	Simple_repeat	3	89	(0)	2402023
2348	10.5	0.3	0.0	chr21	31761211	31761516	(14948467)	C	AluSz	SINE/Alu	(5)	307	1	2402024
2266	11.6	4.9	2.5	chr21	32093014	32093368	(14616615)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2402640
1819	20.5	7.6	4.3	chr21	32093369	32093395	(14616588)	C	MLT1C	LTR/ERVL-MaLR	(441)	26	1	2402639
63	21.1	1.5	6.2	chr21	32093460	32093664	(14616319)	+	(TCCT)n	Simple_repeat	1	208	(0)	2402641
5088	9.1	1.0	3.1	chr21	32121536	32122241	(14587742)	+	LTR8	LTR/ERV1	1	691	(0)	2402702
152	2.8	0.0	0.0	chr21	32771844	32771990	(13937993)	+	(GA)n	Simple_repeat	1	147	(0)	2403728
12	23.7	2.5	0.0	chr21	32772205	32772244	(13937739)	+	GA-rich	Low_complexity	1	41	(0)	2403729
33	22.6	1.6	6.2	chr21	33642406	33642532	(13067451)	+	G-rich	Low_complexity	1	129	(0)	2405359
13	25.8	1.9	3.6	chr21	33642732	33642785	(13067198)	+	(GGC)n	Simple_repeat	1	55	(0)	2405360
13	27.3	0.0	3.6	chr21	33642812	33642867	(13067116)	+	(CGCCCCG)n	Simple_repeat	1	56	(0)	2405361
63	3.3	0.0	0.0	chr21	33690776	33690838	(13019145)	+	(TA)n	Simple_repeat	1	63	(0)	2405460
1170	13.8	0.0	4.8	chr21	33690839	33690861	(13019122)	+	AluSx1	SINE/Alu	295	312	(0)	2405459
350	26.4	3.6	4.6	chr21	33691119	33691248	(13018735)	+	L2c	LINE/L2	3210	3365	(22)	2405461
1652	16.9	10.1	6.7	chr21	33691406	33691601	(13018382)	C	MER31B	LTR/ERV1	(0)	466	243	2405462
1474	19.9	8.8	1.7	chr21	33691602	33691948	(13018035)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	2405463
1652	16.9	10.1	6.7	chr21	33691949	33692200	(13017783)	C	MER31B	LTR/ERV1	(224)	242	1	2405462
182	29.0	3.1	9.7	chr21	34895477	34895579	(11814404)	C	L2b	LINE/L2	(210)	3165	3070	2407313
30	17.8	3.0	1.4	chr21	35500867	35500933	(11209050)	+	(CT)n	Simple_repeat	1	69	(0)	2408202
638	19.7	7.5	5.9	chr21	36321223	36321459	(10388524)	C	L1ME3Cz	LINE/L1	(752)	245	5	2409608
21	10.8	0.0	0.0	chr21	36321533	36321562	(10388421)	+	(T)n	Simple_repeat	1	30	(0)	2409609
22	21.7	9.1	0.0	chr21	36321672	36321748	(10388235)	+	(TC)n	Simple_repeat	1	84	(0)	2409610
950	17.3	7.5	2.1	chr21	36322057	36322245	(10387738)	+	MER58B	DNA/hAT-Charlie	1	200	(141)	2409611
2117	14.0	0.0	1.9	chr21	36496150	36496457	(10213526)	+	AluJb	SINE/Alu	2	303	(9)	2409996
383	21.9	0.1	0.3	chr21	36496661	36497430	(10212553)	+	GA-rich	Low_complexity	1	771	(0)	2409997
40	8.9	0.0	0.0	chr21	36592152	36592211	(10117772)	+	(ACATTGAAAT)n	Simple_repeat	1	60	(0)	2410157
48	22.4	4.6	2.5	chr21	36592303	36592454	(10117529)	+	(CT)n	Simple_repeat	1	159	(0)	2410158
601	25.5	0.8	0.1	chr21	37444959	37445111	(9264872)	C	MIR	SINE/MIR	(95)	173	14	2411605
268	30.5	6.0	1.4	chr21	37445125	37445267	(9264716)	C	MER113	DNA/hAT-Charlie	(83)	438	289	2411606
2130	11.9	1.3	0.0	chr21	37579027	37579320	(9130663)	C	AluSc	SINE/Alu	(10)	299	2	2411823
1274	28.2	4.6	5.9	chr21	37579321	37579542	(9130441)	C	L1MEf	LINE/L1	(5480)	1557	1119	2411822
35	26.7	4.2	0.0	chr21	37607094	37607212	(9102771)	+	GA-rich	Low_complexity	1	124	(0)	2411860
60	22.7	2.3	5.4	chr21	38805637	38805854	(7904129)	+	(CCCCT)n	Simple_repeat	1	223	(0)	2413543
28	3.3	0.0	0.0	chr21	38805860	38805890	(7904093)	+	(TCCCTCC)n	Simple_repeat	1	31	(0)	2413544
427	23.4	17.7	0.6	chr21	41151504	41151648	(5558335)	+	MIR	SINE/MIR	84	254	(8)	2417036
42	15.6	2.5	0.0	chr21	41151794	41151872	(5558111)	+	GA-rich	Low_complexity	1	81	(0)	2417037
242	23.7	7.3	0.0	chr21	41549796	41549871	(5160112)	C	MER92B	LTR/ERV1	(10)	626	545	2417618
232	16.7	0.0	4.0	chr21	41550009	41550058	(5159925)	C	MER31B	LTR/ERV1	(56)	410	363	2417619
234	17.8	2.2	0.0	chr21	41550027	41550071	(5159912)	C	MER92B	LTR/ERV1	(46)	590	545	2417618
232	16.7	0.0	4.0	chr21	41550077	41550126	(5159857)	C	MER31B	LTR/ERV1	(56)	410	363	2417620
234	17.8	2.2	0.0	chr21	41550095	41550139	(5159844)	C	MER92B	LTR/ERV1	(46)	590	545	2417618
2145	9.9	0.0	1.1	chr21	41550493	41550804	(5159179)	C	AluYm1	SINE/Alu	(0)	311	1	2417621
185	33.0	7.3	2.5	chr21	42264543	42264660	(4445323)	C	L2c	LINE/L2	(0)	3387	3264	2418664
42	22.1	7.2	0.7	chr21	42264661	42264799	(4445184)	+	GA-rich	Low_complexity	1	149	(0)	2418665
8237	6.9	1.8	2.0	chr21	42948301	42949462	(3760521)	C	Harlequin-int	LTR/ERV1	(5474)	1422	263	2419609
13	21.4	4.5	5.7	chr21	43293055	43293121	(3416862)	+	(CCCTGTC)n	Simple_repeat	1	70	(0)	2420114
1061	24.1	8.7	0.3	chr21	43293190	43293505	(3416478)	C	L1MC1	LINE/L1	(0)	6333	5989	2420115
19	10.1	0.0	0.0	chr21	44407128	44407159	(2302824)	+	(TTCC)n	Simple_repeat	1	32	(0)	2421706
1615	13.4	8.4	0.4	chr21	44407161	44407422	(2302561)	C	AluJb	SINE/Alu	(24)	288	4	2421707
101	11.3	4.4	0.0	chr21	45981572	45981752	(728231)	+	(CCTCC)n	Simple_repeat	1	189	(0)	2423392
197	18.1	2.7	4.3	chr21	46143282	46143384	(566599)	+	(CTCC)n	Simple_repeat	1	99	(0)	2423544
6541	12.7	4.3	1.3	chr21	46143385	46144361	(565622)	+	LTR13	LTR/ERVK	1	1007	(0)	2423545
197	18.1	2.7	4.3	chr21	46144362	46144774	(565209)	+	(CTCC)n	Simple_repeat	4	412	(0)	2423546
569	11.0	2.4	0.0	chr21	46322709	46322790	(387193)	+	AluSx3	SINE/Alu	214	297	(14)	2423809
1643	18.9	0.4	0.7	chr22	10953348	10953627	(39864841)	+	AluJr	SINE/Alu	18	296	(16)	2424736
255	14.2	4.5	0.8	chr22	11031617	11032124	(39786344)	+	(CT)n	Simple_repeat	1	531	(0)	2424788
1062	7.7	0.0	0.0	chr22	11310020	11310186	(39508282)	C	BSR/Beta	Satellite	(0)	167	1	2425025
9171	31.4	2.8	1.1	chr22	11318917	11320518	(39497950)	C	PRIMA41-int	LTR/ERV1	(1593)	6163	4519	2425036
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
2373	10.2	0.0	0.0	chr22	11616593	11616897	(39201571)	C	AluYk3	SINE/Alu	(4)	307	3	2425260
643	22.0	0.5	0.4	chr22	11616898	11617618	(39200850)	+	(TCTC)n	Simple_repeat	2	722	(0)	2425261
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
2046	15.2	0.0	0.0	chr22	11877779	11878081	(38940387)	C	AluSx	SINE/Alu	(4)	308	6	2425483
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
3134	12.3	0.8	0.0	chr22	11930604	11931100	(38887368)	+	L1PA13	LINE/L1	5175	5675	(1091)	2425549
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
1178	21.5	5.7	1.4	chr22	12637295	12637582	(38180886)	+	LTR53-int	LTR/ERVL	321	621	(2708)	2426071
150	17.5	0.3	1.1	chr22	12637583	12637866	(38180602)	+	GA-rich	Low_complexity	1	285	(0)	2426072
2894	20.6	6.8	5.2	chr22	12637867	12638389	(38180079)	+	LTR53-int	LTR/ERVL	577	1121	(2208)	2426071
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
2918	23.4	4.6	4.7	chr22	16790715	16791685	(34026783)	+	L1MA8	LINE/L1	6702	7710	(0)	2427823
93	11.3	1.4	0.0	chr22	16791688	16791834	(34026634)	+	(AGAG)n	Simple_repeat	1	149	(0)	2427827
1951	16.3	0.0	2.2	chr22	16791903	16792245	(34026223)	C	AluSq2	SINE/Alu	(0)	313	1	2427828
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
113	29.2	1.3	4.4	chr22	20496137	20496610	(30321858)	+	(TCCC)n	Simple_repeat	1	480	(0)	2433428
2152	12.5	0.0	0.3	chr22	21236626	21236922	(29581546)	+	AluSx	SINE/Alu	1	296	(16)	2434809
827	13.2	0.0	0.0	chr22	21236932	21237045	(29581423)	+	AluJb	SINE/Alu	192	305	(7)	2434810
7552	23.9	4.6	4.7	chr22	22453275	22455413	(28363055)	+	HERVI-int	LTR/ERV1	4	2139	(5464)	2436870
1426	23.7	2.0	0.0	chr22	22455398	22455697	(28362771)	+	HERVI-int	LTR/ERV1	2382	2687	(4916)	2436870
3094	15.8	5.7	1.7	chr22	22975079	22975665	(27842803)	+	LTR9	LTR/ERV1	1	612	(0)	2437603
6454	15.0	1.6	1.1	chr22	22975683	22976720	(27841748)	+	HUERS-P3b-int	LTR/ERV1	7	1050	(7869)	2437603
1259	11.9	1.7	0.0	chr22	22991070	22991245	(27827223)	+	AluSq	SINE/Alu	134	312	(1)	2437619
26	11.0	7.8	5.2	chr22	22991246	22991322	(27827146)	+	GA-rich	Low_complexity	1	81	(0)	2437620
115	0.0	1.0	0.0	chr22	22991323	22991426	(27827042)	+	(AGAGAGGG)n	Simple_repeat	1	105	(0)	2437621
25	23.5	1.3	3.8	chr22	22991427	22991439	(27827029)	+	GA-rich	Low_complexity	65	77	(0)	2437622
27	39.7	0.0	0.0	chr22	22991459	22991560	(27826908)	+	(AT)n	Simple_repeat	1	102	(0)	2437623
434	22.8	8.1	3.6	chr22	24146823	24147005	(26671463)	C	MIRb	SINE/MIR	(48)	220	11	2439572
1779	18.7	1.9	1.3	chr22	24147434	24147743	(26670725)	C	AluJb	SINE/Alu	(0)	312	1	2439573
391	30.3	4.4	1.5	chr22	24772371	24772568	(26045900)	+	MIRb	SINE/MIR	38	241	(27)	2440606
717	28.6	2.5	10.4	chr22	25447308	25447615	(25370853)	+	MLT2B3	LTR/ERVL	223	505	(49)	2442207
30	17.2	1.8	0.0	chr22	25447620	25447674	(25370794)	+	(AC)n	Simple_repeat	1	56	(0)	2442208
162	24.2	5.1	0.6	chr22	26159872	26160357	(24658111)	+	GA-rich	Low_complexity	1	511	(0)	2443692
1774	12.0	0.4	1.1	chr22	26558174	26558440	(24260028)	C	AluSz	SINE/Alu	(47)	265	1	2444609
14	7.8	3.7	0.0	chr22	26558443	26558469	(24259999)	+	(AAACA)n	Simple_repeat	1	28	(0)	2444610
13	16.0	0.0	7.3	chr22	26558470	26558510	(24259958)	+	G-rich	Low_complexity	1	41	(0)	2444611
1211	18.9	3.8	3.1	chr22	26558717	26559006	(24259462)	C	MER96B	DNA/hAT-Tip100	(0)	417	126	2444612
82	30.7	3.3	1.6	chr22	26617569	26617931	(24200537)	+	(TCTC)n	Simple_repeat	1	375	(0)	2444766
2408	11.8	0.3	0.0	chr22	26905340	26905687	(23912781)	+	L1PA13	LINE/L1	5815	6163	(0)	2445436
751	19.9	11.0	0.5	chr22	26905967	26906153	(23912315)	+	MER3	DNA/hAT-Charlie	1	209	(0)	2445437
1817	18.8	6.1	7.0	chr22	27871720	27872081	(22946387)	+	MSTB	LTR/ERVL-MaLR	1	361	(65)	2447667
1250	21.5	3.1	5.1	chr22	29120559	29120891	(21697577)	+	MLT1D	LTR/ERVL-MaLR	180	505	(0)	2449924
45	4.2	0.0	0.0	chr22	29816785	29816834	(21001634)	+	(GAGAGAGG)n	Simple_repeat	1	50	(0)	2451398
1988	13.1	0.0	0.3	chr22	29884552	29884863	(20933605)	C	AluSz	SINE/Alu	(0)	312	1	2451573
1614	20.8	1.3	1.0	chr22	29925035	29925332	(20893136)	C	AluJo	SINE/Alu	(13)	299	1	2451655
1522	23.0	9.2	3.4	chr22	30166938	30167409	(20651059)	C	MLT1D	LTR/ERVL-MaLR	(3)	502	1	2452062
292	31.1	13.2	0.7	chr22	30421742	30421893	(20396575)	+	MIRb	SINE/MIR	64	237	(31)	2452578
12	27.1	0.0	0.0	chr22	30421898	30421937	(20396531)	+	(TACTGC)n	Simple_repeat	1	40	(0)	2452579
188	34.1	5.7	5.1	chr22	30422038	30422213	(20396255)	+	L2a	LINE/L2	3233	3409	(17)	2452580
745	14.2	0.0	0.8	chr22	31365195	31365314	(19453154)	C	AluJb	SINE/Alu	(4)	308	190	2454605
549	18.0	16.9	0.0	chr22	31365325	31365452	(19453016)	+	AluJr	SINE/Alu	156	309	(3)	2454606
51	19.4	1.2	6.8	chr22	31365453	31365612	(19452856)	+	GA-rich	Low_complexity	1	162	(0)	2454607
307	31.7	7.6	9.8	chr22	31365624	31365649	(19452819)	+	L1ME4a	LINE/L1	5873	5898	(226)	2454608
2171	11.0	0.0	0.3	chr22	31365650	31365957	(19452511)	+	AluSp	SINE/Alu	1	307	(6)	2454609
375	25.4	3.5	2.6	chr22	32106928	32107040	(18711428)	C	MIR3	SINE/MIR	(10)	198	85	2456387
25	27.1	3.6	4.9	chr22	32546836	32546973	(18271495)	+	(CTCCCTT)n	Simple_repeat	1	143	(0)	2457175
1897	16.8	0.3	2.3	chr22	32546976	32547284	(18271184)	C	AluJb	SINE/Alu	(9)	303	1	2457176
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
197	20.1	0.3	0.5	chr22	34396344	34396732	(16421736)	+	(TCTC)n	Simple_repeat	1	390	(0)	2460961
1946	15.2	6.6	1.7	chr22	34916036	34916382	(15902086)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	2461852
280	23.4	1.3	7.2	chr22	34916383	34916438	(15902030)	+	L2b	LINE/L2	3290	3341	(34)	2461851
108	21.4	1.4	5.3	chr22	34916449	34916727	(15901741)	+	GA-rich	Low_complexity	1	267	(0)	2461853
3338	9.1	4.5	0.0	chr22	34916820	34917270	(15901198)	+	MER4A1	LTR/ERV1	1	472	(0)	2461854
316	28.4	6.6	0.5	chr22	35483406	35483536	(15334932)	+	L2b	LINE/L2	3190	3384	(42)	2463111
173	21.0	2.8	0.5	chr22	35483542	35483936	(15334532)	+	GA-rich	Low_complexity	1	406	(0)	2463116
221	25.5	17.3	0.9	chr22	35484122	35484232	(15334236)	+	L3	LINE/CR1	3930	4062	(37)	2463117
15	5.6	0.0	0.0	chr22	35894979	35894997	(14923471)	+	(A)n	Simple_repeat	1	19	(0)	2463926
17	12.8	0.0	2.8	chr22	35895042	35895077	(14923391)	+	(TCCC)n	Simple_repeat	1	36	(0)	2463927
32	3.2	0.0	0.0	chr22	35895078	35895109	(14923359)	+	(CT)n	Simple_repeat	1	32	(0)	2463928
17	17.9	2.6	0.0	chr22	36028932	36028970	(14789498)	+	G-rich	Low_complexity	1	40	(0)	2464176
378	23.0	11.9	2.6	chr22	36126145	36126296	(14692172)	C	MIRc	SINE/MIR	(84)	184	17	2464442
302	29.2	2.7	1.9	chr22	36239877	36239982	(14578486)	+	MIRb	SINE/MIR	3	125	(143)	2464639
223	27.8	24.2	4.5	chr22	37328581	37328780	(13489688)	+	MIRb	SINE/MIR	9	260	(8)	2466997
254	5.6	1.3	0.0	chr22	37328868	37329168	(13489300)	+	(CT)n	Simple_repeat	1	305	(0)	2466998
23	16.2	2.9	5.6	chr22	37329293	37329322	(13489146)	+	G-rich	Low_complexity	1	45	(27)	2466999
12	0.0	0.0	8.3	chr22	37329323	37329346	(13489122)	+	(GGCA)n	Simple_repeat	1	24	(0)	2467000
23	16.2	2.9	5.6	chr22	37329347	37329362	(13489106)	+	G-rich	Low_complexity	46	72	(0)	2466999
106	8.5	0.0	0.0	chr22	38110025	38110173	(12708295)	+	(GAGAGA)n	Simple_repeat	1	149	(0)	2468817
65	26.1	0.6	1.1	chr22	38803107	38803143	(12015325)	+	(CTCT)n	Simple_repeat	1	37	(0)	2470300
72	2.3	3.3	2.1	chr22	38803144	38803235	(12015233)	+	(CCTT)n	Simple_repeat	1	95	(0)	2470301
306	22.4	2.9	0.0	chr22	38923500	38923566	(11894902)	C	Charlie25	DNA/hAT-Charlie	(5)	2519	2451	2470540
49	25.8	8.6	0.8	chr22	38923660	38923880	(11894588)	+	(TCTC)n	Simple_repeat	1	240	(0)	2470541
519	29.8	4.8	3.2	chr22	38923940	38924185	(11894283)	+	MLT1K	LTR/ERVL-MaLR	186	435	(160)	2470542
289	28.0	2.7	9.3	chr22	38997636	38997753	(11820715)	+	L2c	LINE/L2	3277	3386	(1)	2470673
162	23.6	1.4	1.6	chr22	38997781	38998074	(11820394)	+	(TCCT)n	Simple_repeat	1	292	(0)	2470674
9347	3.2	0.2	0.1	chr22	38998075	38999144	(11819324)	C	MER11C	LTR/ERVK	(0)	1071	1	2470675
162	23.6	1.4	1.6	chr22	38999145	38999268	(11819200)	+	(TCCT)n	Simple_repeat	1	125	(0)	2470676
61	5.1	2.3	2.3	chr22	39243211	39243296	(11575172)	+	(TC)n	Simple_repeat	1	88	(0)	2471185
27	18.0	0.0	0.0	chr22	40177925	40177974	(10640494)	+	GA-rich	Low_complexity	1	50	(0)	2473082
2304	11.1	0.3	0.0	chr22	40711166	40711463	(10107005)	C	AluSq2	SINE/Alu	(14)	299	1	2474169
1735	13.8	0.0	12.7	chr22	40711464	40711683	(10106785)	+	AluJr4	SINE/Alu	123	303	(9)	2474168
257	27.6	18.1	1.6	chr22	40711687	40711870	(10106598)	+	LTR81A	LTR/Gypsy	933	1153	(0)	2474166
2755	22.5	5.0	5.2	chr22	42101147	42101526	(8716942)	C	L1M5	LINE/L1	(2067)	4079	3698	2477431
2300	12.0	0.0	0.0	chr22	42101540	42101848	(8716620)	C	AluSz	SINE/Alu	(3)	309	1	2477435
1778	10.8	2.9	11.0	chr22	42101854	42101898	(8716570)	C	L1PBa	LINE/L1	(3686)	3176	3133	2477436
2410	9.1	0.7	0.0	chr22	42520324	42520632	(8297836)	+	AluSz	SINE/Alu	2	312	(0)	2478261
1003	26.4	4.5	5.7	chr22	42520633	42520716	(8297752)	C	L2c	LINE/L2	(1110)	2309	2224	2478259
454	30.1	7.7	2.3	chr22	42520724	42521006	(8297462)	C	ERVL-int	LTR/ERVL	(3790)	1967	1607	2478262
2178	9.2	4.1	0.0	chr22	43033554	43033834	(7784634)	+	AluSg4	SINE/Alu	1	293	(17)	2479425
387	15.7	4.4	0.0	chr22	43432205	43432969	(7385499)	+	GA-rich	Low_complexity	1	799	(0)	2480226
181	24.1	17.7	0.0	chr22	43433102	43433180	(7385288)	+	L3	LINE/CR1	3790	3885	(214)	2480227
2308	24.6	10.2	5.0	chr22	43707178	43708124	(7110344)	+	L1MEd	LINE/L1	1004	2024	(5079)	2480652
1516	13.9	3.3	10.5	chr22	43729878	43730201	(7088267)	+	AluJo	SINE/Alu	2	301	(11)	2480685
41	14.8	0.0	4.4	chr22	43730204	43730293	(7088175)	+	GA-rich	Low_complexity	1	90	(0)	2480686
589	24.9	6.5	1.7	chr22	43730294	43730469	(7087999)	+	HAL1b	LINE/L1	1370	1554	(867)	2480684
464	23.8	15.8	3.5	chr22	43730495	43730721	(7087747)	+	HAL1b	LINE/L1	2081	2340	(81)	2480684
181	24.8	9.8	10.6	chr22	43955786	43955898	(6862570)	C	MIR3	SINE/MIR	(78)	130	19	2481086
372	27.2	7.4	0.0	chr22	43956055	43956179	(6862289)	+	MIR	SINE/MIR	95	229	(33)	2481087
283	28.1	6.5	4.2	chr22	43956228	43956346	(6862122)	C	MIR3	SINE/MIR	(82)	126	5	2481088
2448	14.0	6.7	3.1	chr22	43956508	43956964	(6861504)	C	LTR26C	LTR/ERV1	(0)	539	65	2481089
3984	23.8	7.8	4.3	chr22	44376013	44378110	(6440358)	+	L1MEg	LINE/L1	1530	3691	(2455)	2481861
476	24.4	14.4	2.3	chr22	44378114	44378289	(6440179)	+	MLT1G3	LTR/ERVL-MaLR	6	206	(373)	2481863
63	29.9	2.5	0.0	chr22	44378309	44378507	(6439961)	+	(CTCT)n	Simple_repeat	1	204	(0)	2481864
931	26.6	7.2	0.7	chr22	44378508	44378849	(6439619)	+	MLT1G3	LTR/ERVL-MaLR	177	581	(14)	2481863
17	28.3	2.8	0.9	chr22	46878282	46878351	(3940117)	+	GA-rich	Low_complexity	1	71	(0)	2486173
179	23.8	2.3	0.2	chr22	47191610	47192044	(3626424)	+	GA-rich	Low_complexity	1	445	(0)	2486515
2325	19.9	6.3	0.4	chr22	47683351	47683829	(3134639)	+	MER67D	LTR/ERV1	1	509	(5)	2487225
1306	21.2	9.9	5.9	chr22	47972743	47973082	(2845386)	C	MLT1A0	LTR/ERVL-MaLR	(7)	358	4	2487639
503	23.4	6.2	1.4	chr22	47973168	47973306	(2845162)	+	MER67A	LTR/ERV1	396	541	(2)	2487640
83	30.2	1.4	1.4	chr22	48849651	48849927	(1968541)	+	GA-rich	Low_complexity	1	281	(0)	2488683
191	33.0	15.2	0.8	chr22	48849965	48850318	(1968150)	C	L2	LINE/L2	(854)	2565	2152	2488684
34	0.0	0.0	0.0	chr22	49237520	49237551	(1580917)	+	(TGAA)n	Simple_repeat	1	32	(0)	2489132
35	2.6	0.0	2.4	chr22	49237652	49237693	(1580775)	+	(CTCC)n	Simple_repeat	1	42	(0)	2489133
369	35.2	8.1	1.4	chr22	49605056	49605274	(1213194)	+	L1ME4a	LINE/L1	5498	5732	(392)	2489565
80	19.5	3.2	1.0	chr22	49605373	49605559	(1212909)	+	(CT)n	Simple_repeat	1	193	(0)	2489567
438	19.6	7.3	0.0	chr22	49605577	49605678	(1212790)	+	MSTD	LTR/ERVL-MaLR	197	306	(90)	2489568
540	31.9	10.0	2.5	chr22	49605679	49605955	(1212513)	+	L1ME4a	LINE/L1	5746	6045	(79)	2489565
1194	20.4	0.9	2.2	chr22	50533003	50533232	(285236)	+	AluJr	SINE/Alu	86	312	(0)	2490815
3631	7.4	0.4	0.9	chr22	50533326	50533790	(284678)	C	LTR2	LTR/ERV1	(0)	463	1	2490816
2193	12.9	0.0	0.0	chr3	9407047	9407348	(188888211)	+	AluSx	SINE/Alu	2	303	(9)	2507140
2272	10.9	0.3	0.0	chr3	9407719	9408012	(188887547)	+	AluSp	SINE/Alu	1	295	(18)	2507141
210	29.5	16.8	4.7	chr3	10026799	10026926	(188268633)	+	MIRb	SINE/MIR	119	261	(1)	2508499
311	19.7	4.3	1.5	chr3	10026937	10027003	(188268556)	+	MIR	SINE/MIR	3	71	(191)	2508500
274	28.3	3.3	1.2	chr3	10027159	10027244	(188268315)	C	L2c	LINE/L2	(38)	3388	3275	2508501
284	34.1	9.3	2.3	chr3	10027298	10027426	(188268133)	C	L2c	LINE/L2	(219)	3168	3030	2508501
3690	5.4	0.9	0.2	chr3	11270481	11270941	(187024618)	C	LTR7B	LTR/ERV1	(0)	464	1	2511138
2007	22.2	5.5	4.3	chr3	11270942	11271177	(187024382)	+	MER92B	LTR/ERV1	348	578	(58)	2511127
2745	1.7	0.0	0.3	chr3	11271220	11271520	(187024039)	C	AluYa5	SINE/Alu	(11)	300	1	2511139
4515	16.2	1.6	3.5	chr3	12033517	12034444	(186261115)	C	L1MB7	LINE/L1	(19)	6165	5255	2512581
1799	18.6	6.6	1.9	chr3	12034449	12034825	(186260734)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2512582
7111	22.0	1.8	4.8	chr3	12034846	12035381	(186260178)	C	MSTD-int	LTR/ERVL-MaLR	(29)	1706	1160	2512582
572	29.9	5.5	0.5	chr3	12195074	12195261	(186100298)	+	MIRb	SINE/MIR	4	201	(67)	2512836
2189	12.0	1.0	0.7	chr3	12719264	12719562	(185575997)	C	AluSx	SINE/Alu	(12)	300	1	2513925
91	8.7	4.8	0.0	chr3	12719628	12719774	(185575785)	+	(GA)n	Simple_repeat	1	154	(0)	2513926
51	26.6	1.2	4.0	chr3	12773160	12773298	(185522261)	+	G-rich	Low_complexity	1	138	(0)	2514075
2281	16.9	6.5	0.5	chr3	12773299	12773731	(185521828)	C	LOR1b	LTR/ERV1	(0)	461	1	2514076
2870	20.6	2.7	1.5	chr3	16818180	16818840	(181476719)	+	L1MC3	LINE/L1	7099	7767	(18)	2521060
363	30.6	11.0	0.7	chr3	16819098	16819234	(181476325)	C	MIR3	SINE/MIR	(57)	151	2	2521061
54	16.1	1.9	0.9	chr3	17063211	17063318	(181232241)	+	(TCCT)n	Simple_repeat	1	110	(0)	2521356
235	29.7	0.0	1.5	chr3	18929905	18929969	(179365590)	C	L1MEi	LINE/L1	(2272)	193	130	2524020
1994	19.5	5.7	0.0	chr3	18930104	18930467	(179365092)	C	MSTB	LTR/ERVL-MaLR	(0)	426	41	2524021
93	19.0	0.5	2.0	chr3	19278394	19278591	(179016968)	+	GA-rich	Low_complexity	1	199	(0)	2524473
110	16.8	5.7	1.1	chr3	19934289	19934551	(178361008)	+	(TC)n	Simple_repeat	1	278	(0)	2525330
335	36.3	9.2	4.8	chr3	20187151	20187419	(178108140)	+	L2b	LINE/L2	3037	3318	(57)	2525826
2179	20.9	2.5	7.0	chr3	20327621	20328164	(177967395)	+	MER92B	LTR/ERV1	104	622	(14)	2526026
1436	15.5	2.3	1.2	chr3	20328168	20328422	(177967137)	C	L1MC1	LINE/L1	(1)	6332	6075	2526027
65	22.7	0.0	3.5	chr3	23148490	23148659	(175146900)	+	GA-rich	Low_complexity	1	170	(0)	2529737
30	20.9	4.4	1.1	chr3	23805827	23805918	(174489641)	+	G-rich	Low_complexity	1	95	(0)	2530810
16	21.9	0.0	2.3	chr3	23806030	23806073	(174489486)	+	(CAG)n	Simple_repeat	1	44	(0)	2530811
21	23.0	5.9	2.2	chr3	23806111	23806195	(174489364)	+	(CCG)n	Simple_repeat	1	90	(0)	2530812
26	27.3	2.3	0.0	chr3	25889678	25889719	(172405840)	+	(TCCC)n	Simple_repeat	1	43	(0)	2533993
26	6.2	0.0	0.0	chr3	25889720	25889753	(172405806)	+	(CTGC)n	Simple_repeat	1	34	(0)	2533994
26	27.3	2.3	0.0	chr3	25889754	25889797	(172405762)	+	(TCCC)n	Simple_repeat	4	48	(0)	2533995
1515	23.8	6.3	0.2	chr3	25949803	25950262	(172345297)	C	L1M4	LINE/L1	(2964)	3182	2693	2534084
18	0.0	0.0	0.0	chr3	25950279	25950298	(172345261)	+	(T)n	Simple_repeat	1	20	(0)	2534085
1214	30.0	6.8	5.0	chr3	25950307	25950801	(172344758)	C	LTR33	LTR/ERVL	(7)	508	5	2534086
1177	17.4	20.1	3.0	chr3	27288283	27288659	(171006900)	+	MER31B	LTR/ERV1	1	510	(4)	2535847
52	26.4	1.2	3.0	chr3	28300595	28300756	(169994803)	+	(CTTC)n	Simple_repeat	1	164	(0)	2537594
318	27.0	17.3	5.7	chr3	28300835	28301078	(169994481)	C	L1ME4b	LINE/L1	(106)	786	509	2537595
129	0.0	5.7	0.0	chr3	28847445	28847585	(169447974)	+	(CGCTCCCTCT)n	Simple_repeat	1	149	(0)	2538370
30	0.0	0.0	0.0	chr3	28847608	28847633	(169447926)	+	(TG)n	Simple_repeat	1	26	(0)	2538371
904	23.0	3.5	6.5	chr3	29121083	29121505	(169174054)	C	MLT1A	LTR/ERVL-MaLR	(0)	408	27	2538723
180	19.1	0.0	4.5	chr3	29280827	29280870	(169014689)	C	MamRTE1	LINE/RTE-BovB	(437)	3375	3334	2538964
49	27.8	0.0	0.0	chr3	29281115	29281236	(169014323)	+	(TTTT)n	Simple_repeat	1	122	(0)	2538965
35	23.7	2.0	1.0	chr3	30512033	30512133	(167783426)	+	(TCTCTC)n	Simple_repeat	1	103	(0)	2540629
1101	31.0	9.2	14.2	chr3	31025505	31026241	(167269318)	+	L2a	LINE/L2	2532	3213	(213)	2541438
807	24.7	10.6	1.3	chr3	31578716	31578945	(166716614)	C	L2a	LINE/L2	(22)	3404	3151	2542315
246	21.4	0.0	0.0	chr3	31857730	31857771	(166437788)	C	L1ME4b	LINE/L1	(124)	768	727	2542747
57	23.3	0.0	0.0	chr3	31857790	31857915	(166437644)	+	GA-rich	Low_complexity	1	126	(0)	2542748
2032	13.0	0.3	2.0	chr3	31858000	31858300	(166437259)	C	AluJb	SINE/Alu	(16)	296	1	2542749
371	21.8	8.8	1.9	chr3	34565793	34565951	(163729608)	+	L1M5	LINE/L1	5232	5402	(744)	2547593
1942	18.6	9.6	4.4	chr3	34565964	34566445	(163729114)	C	MER67D	LTR/ERV1	(4)	510	1	2547594
694	23.2	9.9	0.0	chr3	38083956	38084136	(160211423)	C	L1MC5	LINE/L1	(28)	9276	9076	2552503
193	18.3	0.3	0.0	chr3	38084271	38084619	(160210940)	+	(TAG)n	Simple_repeat	1	350	(0)	2552504
10271	10.9	5.6	1.1	chr3	38432574	38433892	(159861667)	C	THE1C-int	LTR/ERVL-MaLR	(183)	1397	1	2553043
349	28.6	15.0	7.4	chr3	38450722	38450936	(159844623)	C	L2	LINE/L2	(593)	2826	2593	2553063
2158	16.5	1.7	4.4	chr3	38450950	38451362	(159844197)	C	LOR1b	LTR/ERV1	(0)	461	60	2553064
464	22.2	8.7	0.0	chr3	38737588	38737713	(159557846)	+	MER102a	DNA/hAT-Charlie	34	171	(159)	2553455
57	26.1	0.0	0.7	chr3	38737731	38737798	(159557761)	+	(TCTC)n	Simple_repeat	1	68	(0)	2553456
55	0.0	5.9	1.4	chr3	38737799	38737866	(159557693)	+	(TCTT)n	Simple_repeat	1	72	(0)	2553457
57	26.1	0.0	0.7	chr3	38737867	38737946	(159557613)	+	(TCTC)n	Simple_repeat	1	79	(0)	2553458
1037	14.8	5.8	0.0	chr3	39313318	39313479	(158982080)	+	AluSx	SINE/Alu	124	295	(17)	2554317
338	20.5	3.7	0.0	chr3	39313566	39313643	(158981916)	+	HAL1	LINE/L1	1203	1283	(1224)	2554320
778	17.2	13.6	5.5	chr3	40262923	40263247	(158032312)	+	MER31B	LTR/ERV1	1	466	(0)	2555664
340	28.4	2.2	0.0	chr3	40263255	40263342	(158032217)	+	L1ME4b	LINE/L1	801	890	(2)	2555665
175	16.7	0.7	5.8	chr3	40376990	40377150	(157918409)	+	GA-rich	Low_complexity	1	159	(0)	2555849
1938	13.2	0.7	0.0	chr3	40377151	40377415	(157918144)	+	AluSx1	SINE/Alu	14	280	(32)	2555850
175	16.7	0.7	5.8	chr3	40377416	40377681	(157917878)	+	GA-rich	Low_complexity	160	405	(0)	2555851
96	21.2	1.3	2.1	chr3	41475871	41476103	(156819456)	+	G-rich	Low_complexity	1	236	(0)	2557517
2569	26.2	6.9	4.3	chr3	43334892	43336186	(154959373)	C	L1MEd	LINE/L1	(2791)	3528	2166	2560496
29	33.6	1.5	2.9	chr3	43336187	43336333	(154959226)	+	(TTCC)n	Simple_repeat	1	144	(0)	2560498
1909	15.9	0.0	1.4	chr3	43336336	43336631	(154958928)	C	AluJr4	SINE/Alu	(20)	292	1	2560499
521	18.9	5.4	0.9	chr3	43584248	43584354	(154711205)	+	LTR18B	LTR/ERVL	1	112	(502)	2560826
1592	12.0	11.6	0.3	chr3	43584379	43584670	(154710889)	+	LTR18B	LTR/ERVL	286	614	(0)	2560826
12	16.9	0.0	0.0	chr3	44020038	44020064	(154275495)	+	GA-rich	Low_complexity	1	27	(0)	2561491
1506	26.1	13.1	0.2	chr3	44583470	44583988	(153711571)	+	L2a	LINE/L2	2226	2821	(598)	2562340
399	30.3	1.6	0.0	chr3	44583997	44584118	(153711441)	+	LTR82B	LTR/ERVL	538	661	(169)	2562341
332	23.6	9.7	1.1	chr3	44584128	44584221	(153711338)	+	L2a	LINE/L2	2814	2916	(503)	2562340
529	23.7	22.2	1.0	chr3	44584237	44584534	(153711025)	+	L2a	LINE/L2	3024	3402	(24)	2562340
2202	18.0	6.0	0.7	chr3	44686054	44686511	(153609048)	+	MER66B	LTR/ERV1	1	484	(2)	2562498
542	15.4	0.8	16.3	chr3	44686532	44686678	(153608881)	C	MER92B	LTR/ERV1	(0)	636	513	2562499
275	24.3	5.9	5.9	chr3	44686679	44686796	(153608763)	C	MER65A	LTR/ERV1	(0)	445	328	2562500
1339	14.9	2.6	2.0	chr3	44686799	44687032	(153608527)	C	LTR15	LTR/ERV1	(0)	559	259	2562501
193	27.6	11.1	1.0	chr3	45593479	45593586	(152701973)	+	MIR	SINE/MIR	40	158	(50)	2564110
1388	22.3	9.1	2.9	chr3	46027905	46028297	(152267262)	+	LTR27D	LTR/ERV1	166	782	(62)	2564805
4037	19.2	3.9	3.6	chr3	46028311	46028579	(152266980)	C	L1M4	LINE/L1	(749)	5425	5164	2564806
1694	20.2	0.0	5.5	chr3	46840092	46840286	(151455273)	+	AluJr4	SINE/Alu	118	308	(4)	2566004
9506	19.1	3.7	6.6	chr3	46840287	46841322	(151454237)	+	L1M4a2	LINE/L1	3276	3787	(2353)	2566003
14	19.2	2.8	0.0	chr3	48847788	48847823	(149447736)	+	(CCG)n	Simple_repeat	1	37	(0)	2570099
1478	17.6	3.6	1.8	chr3	49397162	49397491	(148898068)	+	L1MB8	LINE/L1	5838	6173	(5)	2571262
404	24.6	6.0	3.2	chr3	49397539	49397687	(148897872)	+	MLT1J	LTR/ERVL-MaLR	1	178	(334)	2571263
305	26.0	7.4	1.0	chr3	49397688	49397788	(148897771)	C	L2	LINE/L2	(1687)	1732	1625	2571264
763	27.5	13.8	5.1	chr3	49397822	49398078	(148897481)	C	L2	LINE/L2	(1915)	1504	1232	2571264
43	16.1	4.0	1.0	chr3	50157319	50157417	(148138142)	+	(CTCC)n	Simple_repeat	1	103	(0)	2572714
902	20.2	1.2	0.0	chr3	50347163	50347325	(147948234)	C	FRAM	SINE/Alu	(10)	166	2	2572937
28	0.0	0.0	0.0	chr3	50347330	50347356	(147948203)	+	(T)n	Simple_repeat	1	27	(0)	2572938
272	34.3	13.4	1.1	chr3	50347357	50347504	(147948055)	+	L2a	LINE/L2	3252	3420	(6)	2572934
16	0.0	0.0	0.0	chr3	50950959	50950976	(147344583)	+	(TC)n	Simple_repeat	1	18	(0)	2573767
329	28.4	10.8	4.7	chr3	50951081	50951228	(147344331)	C	MIRb	SINE/MIR	(8)	260	103	2573768
4436	19.4	0.0	0.0	chr3	51737952	51738684	(146556875)	+	HERVI-int	LTR/ERV1	1113	1845	(5758)	2574900
1487	24.8	0.7	0.0	chr3	51739129	51739434	(146556125)	+	HERVI-int	LTR/ERV1	2384	2691	(4912)	2574900
15	21.0	7.2	2.7	chr3	52128284	52128352	(146167207)	+	(CAG)n	Simple_repeat	1	74	(0)	2575461
289	27.9	3.5	3.5	chr3	53375209	53375323	(144920236)	+	MIR3	SINE/MIR	32	146	(62)	2577532
2409	8.0	0.0	0.0	chr3	53375379	53375666	(144919893)	C	AluSx	SINE/Alu	(14)	298	11	2577533
79	19.4	0.6	0.0	chr3	56111272	56111430	(142184129)	+	(TCTC)n	Simple_repeat	1	160	(0)	2581522
2115	17.3	5.2	2.7	chr3	56331064	56331514	(141964045)	+	MER31B	LTR/ERV1	4	466	(0)	2581914
55	24.3	0.0	2.8	chr3	56363787	56363928	(141931631)	+	GA-rich	Low_complexity	1	142	(0)	2581988
838	24.9	15.1	6.0	chr3	57458967	57459265	(140836294)	C	MamRep137	DNA/TcMar-Tigger	(120)	390	60	2583944
12	4.7	0.0	7.7	chr3	57459282	57459307	(140836252)	+	(ATTT)n	Simple_repeat	1	26	(0)	2583945
2136	17.8	3.9	2.4	chr3	57952149	57952604	(140342955)	C	MLT1C	LTR/ERVL-MaLR	(4)	463	1	2585003
30	11.7	2.1	0.0	chr3	59001379	59001426	(139294133)	+	(TC)n	Simple_repeat	1	49	(0)	2586902
2157	8.9	0.4	2.5	chr3	59001429	59001708	(139293851)	C	AluSp	SINE/Alu	(37)	276	3	2586903
214	37.1	8.5	5.6	chr3	59378233	59378483	(138917076)	C	Tigger19a	DNA/TcMar-Tigger	(0)	323	65	2587427
75	17.3	0.7	0.0	chr3	59378560	59378699	(138916860)	+	(CCCT)n	Simple_repeat	1	141	(0)	2587428
1205	21.4	8.7	9.9	chr3	59528909	59529093	(138766466)	+	MLT1B	LTR/ERVL-MaLR	2	203	(187)	2587649
31	5.8	0.0	0.0	chr3	59529094	59529129	(138766430)	+	(TC)n	Simple_repeat	1	36	(0)	2587650
1205	21.4	8.7	9.9	chr3	59529130	59529337	(138766222)	+	MLT1B	LTR/ERVL-MaLR	204	390	(0)	2587649
226	31.2	2.0	12.7	chr3	59529338	59529461	(138766098)	C	MIR	SINE/MIR	(60)	202	97	2587648
196	31.1	15.2	0.0	chr3	59559164	59559269	(138736290)	C	MIR	SINE/MIR	(133)	129	5	2587686
531	31.6	3.9	3.9	chr3	59559358	59559591	(138735968)	C	MIRb	SINE/MIR	(8)	260	27	2587687
343	38.1	4.8	0.5	chr3	60476076	60476294	(137819265)	+	MIRb	SINE/MIR	13	241	(27)	2589074
1573	25.3	11.9	3.1	chr3	60476384	60476955	(137818604)	C	MER92B	LTR/ERV1	(7)	629	1	2589075
1826	15.4	9.7	5.4	chr3	61169703	61170147	(137125412)	C	MER31B	LTR/ERV1	(0)	466	1	2590115
10533	2.5	0.1	15.3	chr3	61671139	61672773	(136622786)	C	SVA_D	Retroposon/SVA	(0)	1386	1	2591036
39	10.9	0.0	0.0	chr3	61672777	61672837	(136622722)	+	(GAGAGG)n	Simple_repeat	1	61	(0)	2591037
1696	15.5	1.6	3.5	chr3	61672877	61673193	(136622366)	+	AluJb	SINE/Alu	1	311	(1)	2591038
2276	12.6	4.3	0.0	chr3	61926191	61926564	(136368995)	+	MSTA	LTR/ERVL-MaLR	1	391	(37)	2591470
22	10.8	2.4	0.0	chr3	61926565	61926581	(136368978)	+	(TCCT)n	Simple_repeat	1	18	(0)	2591471
33	0.0	0.0	0.0	chr3	61926582	61926612	(136368947)	+	(TCCC)n	Simple_repeat	1	31	(0)	2591472
22	10.8	2.4	0.0	chr3	61926613	61926636	(136368923)	+	(TCCT)n	Simple_repeat	3	26	(0)	2591473
15574	16.4	3.3	3.0	chr3	63189445	63190494	(135105065)	C	L1MA5	LINE/L1	(2963)	4599	3504	2593612
559	24.9	12.8	3.3	chr3	63190511	63190693	(135104866)	C	MLT1F1	LTR/ERVL-MaLR	(190)	379	177	2593614
23	11.8	0.0	0.0	chr3	63190694	63190731	(135104828)	+	(AGGG)n	Simple_repeat	1	38	(0)	2593615
341	28.1	1.6	3.9	chr3	63190736	63190926	(135104633)	C	MLT1F1	LTR/ERVL-MaLR	(339)	221	6	2593614
38	4.7	0.0	0.0	chr3	63190938	63190981	(135104578)	+	(TTTTG)n	Simple_repeat	1	44	(0)	2593616
127	21.6	6.6	4.2	chr3	63764101	63764604	(134530955)	+	A-rich	Low_complexity	35	553	(0)	2594609
35	0.0	0.0	0.0	chr3	63912685	63912716	(134382843)	+	(GCA)n	Simple_repeat	1	32	(0)	2594889
17	24.2	1.6	3.2	chr3	63912941	63913002	(134382557)	+	(CCTCCAC)n	Simple_repeat	1	63	(0)	2594890
204	34.7	4.7	3.2	chr3	64183955	64184079	(134111480)	+	MIR3	SINE/MIR	82	208	(0)	2595273
475	25.3	3.7	5.4	chr3	64184232	64184398	(134111161)	C	MIR	SINE/MIR	(91)	171	8	2595274
1516	17.1	3.7	6.9	chr3	64184478	64184782	(134110777)	C	AluJr	SINE/Alu	(17)	295	1	2595275
1487	19.1	6.2	2.8	chr3	64699905	64700265	(133595294)	C	MLT1B	LTR/ERVL-MaLR	(16)	374	1	2596167
282	28.9	1.2	0.0	chr3	64700266	64700348	(133595211)	+	L1ME4b	LINE/L1	794	877	(15)	2596165
366	27.7	17.1	1.2	chr3	64700359	64700599	(133594960)	C	L2c	LINE/L2	(847)	2572	2286	2596160
792	21.3	1.6	2.7	chr3	64700605	64700792	(133594767)	C	MER5A	DNA/hAT-Charlie	(0)	189	4	2596168
416	37.0	0.0	6.5	chr3	64700804	64700988	(133594571)	+	MER5B	DNA/hAT-Charlie	1	173	(5)	2596169
1857	16.6	1.3	2.2	chr3	65734173	65734486	(132561073)	+	AluJo	SINE/Alu	1	311	(1)	2597904
68	14.4	0.0	0.0	chr3	65734487	65734598	(132560961)	+	(GAGA)n	Simple_repeat	1	112	(0)	2597905
717	35.8	0.4	0.0	chr3	67260968	67261193	(131034366)	+	LTR33A	LTR/ERVL	74	300	(220)	2600565
606	31.2	1.9	0.5	chr3	67261273	67261478	(131034081)	+	LTR33A	LTR/ERVL	254	462	(58)	2600565
658	35.3	7.2	5.5	chr3	68908567	68908921	(129386638)	+	L3	LINE/CR1	3317	3687	(412)	2603137
813	26.4	3.8	0.0	chr3	68908922	68909122	(129386437)	+	MER3	DNA/hAT-Charlie	1	209	(0)	2603140
16	27.7	0.0	0.0	chr3	71531508	71531555	(126764004)	+	A-rich	Low_complexity	1	48	(0)	2607376
1173	20.2	8.2	12.9	chr3	72154668	72154846	(126140713)	+	MLT1B	LTR/ERVL-MaLR	2	181	(209)	2608586
37	11.4	0.0	0.0	chr3	72154847	72154905	(126140654)	+	(CT)n	Simple_repeat	1	59	(0)	2608587
1173	20.2	8.2	12.9	chr3	72154906	72155135	(126140424)	+	MLT1B	LTR/ERVL-MaLR	182	390	(0)	2608586
181	18.9	2.8	1.0	chr3	73227850	73228242	(125067317)	+	(CT)n	Simple_repeat	1	404	(0)	2610861
268	34.4	10.9	0.9	chr3	73297935	73298148	(124997411)	C	MIRb	SINE/MIR	(30)	238	1	2610984
21	22.4	1.9	1.8	chr3	73298192	73298245	(124997314)	+	(CT)n	Simple_repeat	1	55	(0)	2610985
18	27.6	1.2	4.7	chr3	77039727	77039811	(121255748)	+	(CCCCT)n	Simple_repeat	1	86	(0)	2616366
34	7.0	0.0	0.0	chr3	77040050	77040094	(121255465)	+	(CCCT)n	Simple_repeat	1	45	(0)	2616367
48	13.2	1.1	1.1	chr3	77380650	77380736	(120914823)	+	(CTCC)n	Simple_repeat	1	88	(0)	2616804
274	30.8	3.2	2.1	chr3	78719170	78719262	(119576297)	+	L2a	LINE/L2	3326	3419	(7)	2618519
56	14.2	0.9	2.7	chr3	79094848	79094957	(119200602)	+	(CTCC)n	Simple_repeat	1	111	(0)	2619022
195	29.1	5.6	10.7	chr3	79094962	79095092	(119200467)	C	L2b	LINE/L2	(1)	3374	3251	2619023
2672	12.8	9.3	0.4	chr3	79598572	79599059	(118696500)	+	L1PBa	LINE/L1	881	1416	(5447)	2619713
16	15.6	0.0	2.6	chr3	79640285	79640322	(118655237)	+	A-rich	Low_complexity	1	38	(0)	2619748
972	13.8	7.0	0.6	chr3	79640330	79640489	(118655070)	+	THE1B	LTR/ERVL-MaLR	194	364	(0)	2619749
9991	15.6	2.2	2.1	chr3	79711673	79712931	(118582628)	+	Tigger1	DNA/TcMar-Tigger	1	1260	(1158)	2619829
103	25.1	2.3	2.2	chr3	79917334	79917640	(118377919)	+	GA-rich	Low_complexity	1	314	(0)	2620073
766	4.5	0.0	0.0	chr3	80285286	80285373	(118010186)	+	AluYj4	SINE/Alu	216	303	(8)	2620573
627	31.2	4.9	2.2	chr3	80285529	80285885	(118009674)	C	L1ME1	LINE/L1	(6003)	397	31	2620568
1297	34.5	6.2	2.2	chr3	80571388	80572099	(117723460)	C	L2a	LINE/L2	(1008)	2411	1670	2620930
265	15.4	0.0	5.8	chr3	80622660	80622728	(117672831)	C	MLT2D	LTR/ERVL	(0)	567	503	2621005
26	6.2	8.0	0.0	chr3	80622731	80622780	(117672779)	+	(GAGAGG)n	Simple_repeat	1	54	(0)	2621006
1837	20.6	1.3	1.1	chr3	80622781	80623162	(117672397)	C	MLT2D	LTR/ERVL	(21)	533	1	2621005
278	20.7	1.7	0.0	chr3	81240476	81240533	(117055026)	C	MamRep137	DNA/TcMar-Tigger	(191)	319	261	2621800
109	22.2	1.7	2.7	chr3	81240653	81240939	(117054620)	+	GA-rich	Low_complexity	1	292	(0)	2621801
49	20.2	0.0	0.0	chr3	81563884	81563982	(116731577)	+	G-rich	Low_complexity	1	99	(0)	2622221
921	23.9	4.8	4.0	chr3	81563985	81564211	(116731348)	+	MLT1A1	LTR/ERVL-MaLR	1	229	(179)	2622222
1301	11.4	1.7	0.0	chr3	81768992	81769167	(116526392)	+	AluSc8	SINE/Alu	119	297	(14)	2622542
246	31.9	5.5	0.0	chr3	81769168	81769236	(116526323)	+	MER91A	DNA/hAT-Tip100	124	196	(0)	2622543
41	14.8	4.7	0.0	chr3	81769241	81769325	(116526234)	+	(TCTC)n	Simple_repeat	1	89	(0)	2622544
180	38.8	4.6	1.0	chr3	81896030	81896133	(116399426)	C	L2c	LINE/L2	(228)	3159	3052	2622728
185	37.0	7.5	5.8	chr3	81896183	81896326	(116399233)	C	L2c	LINE/L2	(635)	2784	2647	2622728
2303	13.5	2.5	0.0	chr3	81896327	81896681	(116398878)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2622729
330	20.5	1.3	1.3	chr3	83899623	83899701	(114395858)	+	MLT1E1A	LTR/ERVL-MaLR	602	680	(0)	2625125
351	24.4	16.2	0.8	chr3	83899684	83899803	(114395756)	C	MER67D	LTR/ERV1	(2)	512	371	2625126
1469	15.4	3.1	0.0	chr3	83899829	83900107	(114395452)	C	L1MA5	LINE/L1	(10)	6290	6003	2625127
11	27.7	1.6	4.8	chr3	84257941	84258002	(114037557)	+	(CTCTTT)n	Simple_repeat	1	63	(0)	2625531
16	11.3	0.0	0.0	chr3	84258241	84258269	(114037290)	+	(TTTTC)n	Simple_repeat	1	29	(0)	2625532
20	4.1	0.0	0.0	chr3	84258359	84258383	(114037176)	+	(TG)n	Simple_repeat	1	25	(0)	2625533
1943	19.9	7.5	6.5	chr3	84891243	84891747	(113403812)	+	MER67D	LTR/ERV1	1	510	(4)	2626319
74	1.4	0.0	0.0	chr3	85809659	85809728	(112485831)	+	(CCTT)n	Simple_repeat	1	70	(0)	2627509
34	8.7	0.0	0.0	chr3	85809744	85809793	(112485766)	+	(CTCT)n	Simple_repeat	1	50	(0)	2627510
16	0.0	0.0	0.0	chr3	85809794	85809813	(112485746)	+	(TCTT)n	Simple_repeat	3	22	(0)	2627511
1844	12.0	5.5	12.3	chr3	87633783	87633946	(110661613)	+	THE1B	LTR/ERVL-MaLR	2	182	(182)	2629770
87	0.0	4.4	0.0	chr3	87633947	87634037	(110661522)	+	(CTCTCCCCCT)n	Simple_repeat	1	95	(0)	2629771
1844	12.0	5.5	12.3	chr3	87634038	87634263	(110661296)	+	THE1B	LTR/ERVL-MaLR	183	364	(0)	2629770
40304	12.0	3.5	3.0	chr3	87734040	87740893	(110554666)	C	Harlequin-int	LTR/ERV1	(1)	6895	1	2629906
32250	4.0	0.6	0.4	chr3	87940824	87945057	(110350502)	C	HERV17-int	LTR/ERV1	(3559)	5067	838	2630149
50	3.5	7.5	3.0	chr3	87945058	87945151	(110350408)	+	(TC)n	Simple_repeat	1	101	(0)	2630150
19594	7.1	1.2	118.3	chr3	87945152	87945852	(110349707)	C	HERV17-int	LTR/ERV1	(7789)	837	2	2630149
210	19.4	0.6	3.3	chr3	89611991	89612469	(108683090)	+	(TCCT)n	Simple_repeat	1	482	(0)	2632241
15	23.0	0.0	0.0	chr3	89612444	89612480	(108683079)	+	(TCTC)n	Simple_repeat	1	37	(0)	2632242
30	5.6	0.0	0.0	chr3	89612492	89612528	(108683031)	+	(TCCC)n	Simple_repeat	1	37	(0)	2632243
875	23.0	7.0	0.0	chr3	89612531	89612743	(108682816)	C	L1MB7	LINE/L1	(1954)	5052	4824	2632238
35057	5.8	0.9	0.7	chr3	96668859	96673354	(101622205)	C	HERV17-int	LTR/ERV1	(3559)	5067	704	2636917
196	14.3	6.5	0.0	chr3	96673357	96673771	(101621788)	+	(TC)n	Simple_repeat	1	442	(0)	2636918
6323	7.7	0.5	1.7	chr3	96673781	96674674	(101620885)	C	HERV17-int	LTR/ERV1	(7779)	847	1	2636917
79	18.4	1.6	3.1	chr3	97014286	97014473	(101281086)	+	(TTCC)n	Simple_repeat	1	191	(0)	2637282
11446	10.8	1.2	0.9	chr3	97708019	97709638	(100585921)	+	THE1D-int	LTR/ERVL-MaLR	1	1625	(6)	2638144
5489	14.7	9.2	2.8	chr3	97959613	97960582	(100334977)	+	Tigger2b_Pri	DNA/TcMar-Tigger	22	1065	(3)	2638425
241	30.1	6.1	3.1	chr3	98148108	98148203	(100147356)	C	MLT1N2	LTR/ERVL-MaLR	(364)	198	100	2638660
627	28.9	8.5	6.6	chr3	98343679	98344164	(99951395)	C	LTR41B	LTR/ERVL	(85)	673	63	2638852
1340	27.0	2.5	0.0	chr3	98344191	98344545	(99951014)	+	L1ME1	LINE/L1	5803	6166	(13)	2638841
17	18.6	0.0	7.0	chr3	98902062	98902118	(99393441)	+	(CCTCGCT)n	Simple_repeat	1	57	(0)	2639607
20	8.4	5.3	0.0	chr3	99876079	99876116	(98419443)	+	(GCCGGG)n	Simple_repeat	1	40	(0)	2640829
244	23.1	1.9	1.9	chr3	100555645	100555697	(97739862)	+	L3	LINE/CR1	4023	4075	(24)	2641905
442	26.5	2.6	12.2	chr3	102225667	102225838	(96069721)	C	MIR3	SINE/MIR	(10)	198	44	2644252
7284	4.8	0.2	0.0	chr3	103881271	103882316	(94413243)	C	L1PA5	LINE/L1	(1)	6153	5106	2646391
29	35.5	1.1	4.8	chr3	103882537	103882723	(94412836)	+	A-rich	Low_complexity	1	189	(0)	2646392
20709	10.4	0.6	1.2	chr3	104927779	104929731	(93365828)	C	L1PB1	LINE/L1	(15)	6136	4201	2647594
1081	28.0	5.7	7.8	chr3	105276645	105277039	(93018520)	C	MLT1G3	LTR/ERVL-MaLR	(8)	587	221	2648065
38	0.0	0.0	0.0	chr3	105277040	105277072	(93018487)	+	(AG)n	Simple_repeat	1	33	(0)	2648066
1081	30.9	5.5	8.7	chr3	105277073	105277245	(93018314)	C	MLT1G3	LTR/ERVL-MaLR	(375)	220	46	2648065
15	14.3	10.4	1.9	chr3	105353960	105354007	(92941552)	+	GA-rich	Low_complexity	1	53	(0)	2648160
12	13.7	6.2	0.0	chr3	105354188	105354219	(92941340)	+	(GTTTG)n	Simple_repeat	1	34	(0)	2648161
12	19.4	0.0	8.2	chr3	105354346	105354394	(92941165)	+	(TCCCTC)n	Simple_repeat	1	49	(0)	2648162
12	12.6	0.0	3.6	chr3	105366332	105366359	(92929200)	+	(TCCTT)n	Simple_repeat	1	28	(0)	2648179
46	16.6	0.0	0.0	chr3	106249859	106249941	(92045618)	+	(TAC)n	Simple_repeat	1	83	(0)	2649279
295	39.9	3.6	1.5	chr3	106249974	106250108	(92045451)	C	L2b	LINE/L2	(1)	3374	3237	2649280
267	29.6	5.3	0.0	chr3	106775529	106775599	(91519960)	C	L3b	LINE/CR1	(31)	5201	5127	2649951
2362	18.6	3.1	4.3	chr3	106775685	106776201	(91519358)	C	MER67D	LTR/ERV1	(0)	514	4	2649952
31	0.0	0.0	0.0	chr3	107523219	107523247	(90772312)	+	(GCG)n	Simple_repeat	1	29	(0)	2651001
14	13.9	2.2	6.5	chr3	107524117	107524161	(90771398)	+	(AGGTGG)n	Simple_repeat	1	46	(0)	2651002
1925	16.5	11.5	0.8	chr3	108471414	108471815	(89823744)	+	MER31B	LTR/ERV1	1	451	(15)	2652327
283	27.4	0.0	11.6	chr3	108471881	108471975	(89823584)	+	MIRb	SINE/MIR	64	147	(121)	2652328
989	19.7	19.6	11.9	chr3	108859630	108860073	(89435486)	+	MER67D	LTR/ERV1	1	486	(28)	2652896
1023	27.5	4.5	0.4	chr3	108860143	108860419	(89435140)	+	MLT1J	LTR/ERVL-MaLR	224	512	(0)	2652897
2296	9.7	0.0	1.7	chr3	108873222	108873544	(89422015)	+	AluSc8	SINE/Alu	1	311	(0)	2652923
259	23.2	5.3	13.8	chr3	108873693	108873837	(89421722)	+	MER67B	LTR/ERV1	527	658	(3)	2652924
1115	25.1	4.7	4.5	chr3	108873858	108874237	(89421322)	+	L1ME3E	LINE/L1	5783	6163	(79)	2652920
1921	15.6	3.0	1.4	chr3	109167429	109167723	(89127836)	+	AluJb	SINE/Alu	1	300	(12)	2653359
79	16.3	0.7	0.0	chr3	109167729	109167870	(89127689)	+	G-rich	Low_complexity	1	143	(0)	2653360
329	24.2	0.1	6.8	chr3	109167875	109167982	(89127577)	+	MIR3	SINE/MIR	102	203	(5)	2653361
2206	25.0	8.1	5.1	chr3	112032805	112033107	(86262452)	C	MER97a	DNA/hAT-Tip100	(535)	355	54	2657285
1017	21.7	7.7	1.1	chr3	112033162	112033440	(86262119)	C	MER31B	LTR/ERV1	(21)	445	147	2657290
17	20.3	7.8	0.0	chr3	114454763	114454813	(83840746)	+	(TC)n	Simple_repeat	1	55	(0)	2660763
107	22.7	2.0	0.4	chr3	114454929	114455183	(83840376)	+	GA-rich	Low_complexity	1	260	(0)	2660764
29	23.7	0.0	0.0	chr3	114502745	114502811	(83792748)	+	(CCTC)n	Simple_repeat	1	67	(0)	2660844
19	35.1	1.2	1.2	chr3	114502812	114502843	(83792716)	+	(CTTT)n	Simple_repeat	3	101	(0)	2660845
26	23.7	4.1	6.5	chr3	115623333	115623479	(82672080)	+	GA-rich	Low_complexity	1	153	(0)	2662366
14	18.2	0.0	0.0	chr3	116445417	116445447	(81850112)	+	(GGCG)n	Simple_repeat	1	31	(0)	2663519
23	12.6	2.3	0.0	chr3	116445470	116445512	(81850047)	+	(CAG)n	Simple_repeat	1	44	(0)	2663520
19	16.9	0.0	0.0	chr3	116445582	116445614	(81849945)	+	(C)n	Simple_repeat	1	33	(0)	2663521
837	29.7	6.7	4.5	chr3	117735771	117736182	(80559377)	+	L2a	LINE/L2	2887	3309	(117)	2665303
1485	13.6	0.0	0.0	chr3	119052198	119052396	(79243163)	+	AluSz	SINE/Alu	1	199	(113)	2667042
46	9.7	0.0	0.0	chr3	119052413	119052499	(79243060)	+	(AGGG)n	Simple_repeat	1	87	(0)	2667043
12312	9.1	0.5	1.7	chr3	119052500	119054820	(79240739)	+	L1PB1	LINE/L1	4209	6498	(369)	2667038
13	18.5	2.6	2.5	chr3	119429779	119429817	(78865742)	+	(TTAT)n	Simple_repeat	1	40	(0)	2667556
510	30.1	13.0	5.3	chr3	119430181	119430576	(78864983)	+	L2a	LINE/L2	2995	3425	(1)	2667548
2120	19.3	8.0	3.5	chr3	119967376	119967716	(78327843)	+	L1M4	LINE/L1	4615	4963	(1183)	2668432
61	11.6	1.0	0.0	chr3	119967770	119967866	(78327693)	+	(TCTC)n	Simple_repeat	1	98	(0)	2668434
2210	9.8	1.7	0.0	chr3	119967868	119968153	(78327406)	C	AluSc8	SINE/Alu	(20)	291	1	2668435
14	22.2	2.4	0.0	chr3	121571250	121571291	(76724268)	+	(TGATATT)n	Simple_repeat	1	43	(0)	2670647
922	17.5	7.9	0.5	chr3	121571342	121571553	(76724006)	+	L1M3	LINE/L1	4307	4535	(1605)	2670648
26	0.0	0.0	0.0	chr3	121571554	121571578	(76723981)	+	(TAT)n	Simple_repeat	1	25	(0)	2670649
1574	9.3	2.7	0.5	chr3	121571579	121571730	(76723829)	C	AluSx4	SINE/Alu	(26)	284	132	2670650
1275	13.4	0.6	0.0	chr3	122452322	122452500	(75843059)	+	AluSx1	SINE/Alu	95	274	(38)	2672015
1803	16.5	2.0	0.7	chr3	122452953	122453243	(75842316)	C	AluJb	SINE/Alu	(17)	295	1	2672016
1079	34.7	10.4	3.9	chr3	123200502	123201460	(75094099)	+	L2b	LINE/L2	2341	3375	(0)	2673333
1907	15.1	1.0	3.8	chr3	123395594	123395912	(74899647)	+	AluJr	SINE/Alu	2	311	(1)	2673630
181	30.1	2.6	4.4	chr3	123395915	123396717	(74898842)	+	GA-rich	Low_complexity	1	787	(0)	2673631
63	3.2	0.0	0.0	chr3	123396718	123396782	(74898777)	+	(GAAG)n	Simple_repeat	1	65	(0)	2673632
181	30.1	2.6	4.4	chr3	123396783	123396818	(74898741)	+	polypurine	Low_complexity	788	823	(0)	2673633
11670	10.1	0.6	0.5	chr3	123590291	123591868	(74703691)	C	THE1D-int	LTR/ERVL-MaLR	(51)	1580	1	2673970
282	30.5	9.7	0.8	chr3	123702359	123702490	(74593069)	C	MIRc	SINE/MIR	(5)	263	119	2674159
20	10.1	0.0	0.0	chr3	124033192	124033223	(74262336)	+	(GGC)n	Simple_repeat	1	32	(0)	2674684
47	22.1	1.7	0.0	chr3	124033219	124033333	(74262226)	+	GA-rich	Low_complexity	1	117	(0)	2674685
16	9.0	0.0	9.3	chr3	124033430	124033472	(74262087)	+	(GCCCCG)n	Simple_repeat	1	43	(0)	2674686
18	11.6	0.0	0.0	chr3	126684424	126684451	(71611108)	+	(CA)n	Simple_repeat	1	28	(0)	2678934
17	28.7	1.9	5.7	chr3	126684452	126684525	(71611034)	+	(TCACAC)n	Simple_repeat	2	105	(0)	2678935
55	27.1	4.7	6.8	chr3	127045357	127045398	(71250161)	+	GA-rich	Low_complexity	1	423	(0)	2679422
114	22.5	2.2	4.9	chr3	127045399	127045760	(71249799)	+	G-rich	Low_complexity	1	370	(0)	2679423
204	34.2	6.5	2.2	chr3	127423267	127423380	(70872179)	C	MIRb	SINE/MIR	(106)	156	45	2680006
17	21.9	1.7	4.9	chr3	127423649	127423708	(70871851)	+	(CTTC)n	Simple_repeat	1	61	(0)	2680007
48	32.4	2.3	2.7	chr3	129919338	129919551	(68376008)	+	GA-rich	Low_complexity	1	219	(0)	2684668
28	19.4	0.0	0.0	chr3	129919563	129919618	(68375941)	+	(TCCT)n	Simple_repeat	1	56	(0)	2684669
38	4.3	4.1	0.0	chr3	129919619	129919667	(68375892)	+	(TC)n	Simple_repeat	1	51	(0)	2684670
401	30.5	5.6	3.5	chr3	130538898	130539125	(67756434)	C	MLT1J1	LTR/ERVL-MaLR	(12)	432	200	2685654
2409	7.8	0.3	0.0	chr3	130539354	130539647	(67755912)	+	AluSg	SINE/Alu	1	295	(15)	2685655
16	14.2	4.7	7.5	chr3	130894016	130894079	(67401480)	+	(GGAGGC)n	Simple_repeat	1	67	(0)	2686147
24	10.6	0.0	8.3	chr3	130894131	130894190	(67401369)	+	(CCCT)n	Simple_repeat	1	60	(0)	2686148
19	18.6	9.2	1.2	chr3	130894191	130894204	(67401355)	+	(TCCTC)n	Simple_repeat	3	83	(0)	2686149
329	31.1	0.8	0.0	chr3	131323846	131323964	(66971595)	C	MER94	DNA/hAT-Blackjack	(14)	120	1	2686734
626	20.8	11.0	4.7	chr3	131324022	131324233	(66971326)	C	MER31B	LTR/ERV1	(0)	466	240	2686735
468	14.8	12.9	0.0	chr3	131324217	131324317	(66971242)	C	MER31B	LTR/ERV1	(348)	118	3	2686735
361	30.9	5.2	3.5	chr3	131503226	131503396	(66792163)	C	MIRb	SINE/MIR	(23)	245	72	2686989
463	31.4	7.0	0.0	chr3	133662278	133662436	(64633123)	C	MIRb	SINE/MIR	(85)	183	13	2690342
353	28.5	8.1	0.6	chr3	134039523	134039681	(64255878)	+	MLT1K	LTR/ERVL-MaLR	5	176	(419)	2690838
293	26.4	1.1	1.1	chr3	134039894	134039985	(64255574)	+	MLT1K	LTR/ERVL-MaLR	494	585	(10)	2690838
791	21.2	4.8	1.2	chr3	135193804	135193965	(63101594)	C	MLT1G1	LTR/ERVL-MaLR	(11)	568	401	2692533
846	23.3	13.2	2.3	chr3	135194005	135194267	(63101292)	C	MLT1G1	LTR/ERVL-MaLR	(281)	298	3	2692533
1956	13.6	6.1	1.9	chr3	135985111	135985179	(62310380)	+	THE1C	LTR/ERVL-MaLR	311	375	(0)	2693624
83	17.0	0.7	0.0	chr3	135985295	135985442	(62310117)	+	(CT)n	Simple_repeat	1	149	(0)	2693626
267	31.9	5.8	7.4	chr3	135985490	135985611	(62309948)	C	L2	LINE/L2	(3291)	128	9	2693627
1991	26.7	4.3	4.6	chr3	135985712	135986297	(62309262)	C	L2a	LINE/L2	(2502)	917	334	2693621
2120	14.9	0.0	0.0	chr3	136673821	136674116	(61621443)	+	AluSz6	SINE/Alu	1	296	(16)	2694825
71	6.7	0.0	0.0	chr3	136674117	136674212	(61621347)	+	(GGGA)n	Simple_repeat	1	96	(0)	2694826
1466	21.5	4.5	2.6	chr3	136674216	136674673	(61620886)	+	L1ME1	LINE/L1	5712	6178	(1)	2694827
199	30.9	0.0	6.8	chr3	136840417	136840475	(61455084)	C	MamSINE1	SINE/tRNA-RTE	(74)	216	162	2695195
46	26.4	1.5	2.2	chr3	136840485	136840620	(61454939)	+	(CTCC)n	Simple_repeat	1	138	(0)	2695196
2409	11.0	1.0	0.0	chr3	136840623	136840922	(61454637)	C	AluSx	SINE/Alu	(9)	303	1	2695197
393	29.5	8.0	4.0	chr3	137167354	137167783	(61127776)	C	L1M7	LINE/L1	(1136)	1285	837	2695746
147	21.9	2.2	3.5	chr3	137167854	137168243	(61127316)	+	(TCCT)n	Simple_repeat	1	386	(0)	2695748
29	7.9	0.0	0.0	chr3	137168244	137168284	(61127275)	+	(CCTT)n	Simple_repeat	1	41	(0)	2695749
147	21.9	2.2	3.5	chr3	137168285	137168308	(61127251)	+	(TCCT)n	Simple_repeat	3	24	(0)	2695750
7256	2.8	0.1	0.0	chr3	137168309	137169960	(61125599)	C	L1PA3	LINE/L1	(0)	6155	4518	2695751
2220	13.6	6.2	2.4	chr3	138099528	138099942	(60195617)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	2696948
749	17.8	8.8	11.1	chr3	138099943	138099980	(60195579)	+	MER21C	LTR/ERVL	198	228	(710)	2696945
522	27.3	11.2	0.5	chr3	138123897	138124080	(60171479)	+	MLT1J	LTR/ERVL-MaLR	106	311	(201)	2697001
19	10.8	2.3	4.4	chr3	138609240	138609284	(59686275)	+	G-rich	Low_complexity	1	44	(0)	2697789
271	27.1	9.2	0.8	chr3	138609349	138609478	(59686081)	C	L1ME4a	LINE/L1	(16)	6108	5967	2697790
95	3.0	0.0	2.8	chr3	138609534	138609641	(59685918)	+	(CT)n	Simple_repeat	1	108	(0)	2697791
50	0.0	0.0	0.0	chr3	138757479	138757521	(59538038)	+	(AC)n	Simple_repeat	1	43	(0)	2698073
22	20.6	1.7	1.7	chr3	138757556	138757613	(59537946)	+	A-rich	Low_complexity	1	59	(0)	2698074
78	17.6	0.6	1.9	chr3	138757591	138757749	(59537810)	+	GA-rich	Low_complexity	1	160	(0)	2698075
3018	17.1	6.9	1.2	chr3	138757750	138758406	(59537153)	+	L1MB4	LINE/L1	5484	6180	(0)	2698071
888	16.8	2.0	14.3	chr3	139199532	139199761	(59095798)	+	MER20	DNA/hAT-Charlie	19	219	(0)	2698953
73	22.7	1.3	5.1	chr3	139251243	139251476	(59044083)	+	(CCT)n	Simple_repeat	1	237	(0)	2699026
37	32.1	1.3	1.9	chr3	139260608	139260764	(59034795)	+	GA-rich	Low_complexity	1	159	(0)	2699039
477	33.9	4.6	1.3	chr3	140138901	140139130	(58156429)	+	MIRb	SINE/MIR	2	239	(29)	2700380
207	36.5	5.5	3.1	chr3	140139157	140139351	(58156208)	+	MIRc	SINE/MIR	2	201	(67)	2700381
41	26.1	0.9	0.0	chr3	140587146	140587253	(57708306)	+	GA-rich	Low_complexity	1	109	(0)	2701059
306	34.1	6.5	2.3	chr3	140767932	140768108	(57527451)	+	LTR84b	LTR/ERVL	314	498	(263)	2701304
639	29.1	4.6	3.8	chr3	140768113	140768215	(57527344)	C	MIR	SINE/MIR	(0)	262	163	2701305
267	26.1	0.9	10.5	chr3	141267938	141268061	(57027498)	+	L1ME4a	LINE/L1	5649	5760	(364)	2702038
18	16.3	2.9	0.0	chr3	141460658	141460706	(56834853)	+	(CA)n	Simple_repeat	1	50	(0)	2702329
1474	11.1	7.9	0.8	chr3	141460768	141461037	(56834522)	C	L1MA4	LINE/L1	(112)	6188	5900	2702330
1858	14.7	2.1	0.0	chr3	141665207	141665479	(56630080)	+	AluJr	SINE/Alu	1	279	(33)	2702661
396	16.6	1.2	1.2	chr3	141665480	141666219	(56629340)	+	GA-rich	Low_complexity	17	755	(0)	2702662
1855	20.4	5.3	0.0	chr3	141809923	141810295	(56485264)	+	MLT2D	LTR/ERVL	1	394	(20)	2702907
48	22.9	1.8	0.9	chr3	141810296	141810409	(56485150)	+	(CT)n	Simple_repeat	1	116	(0)	2702908
12	0.0	0.0	5.0	chr3	141810507	141810526	(56485033)	+	(ATT)n	Simple_repeat	1	20	(0)	2702909
1630	9.9	0.0	0.9	chr3	141810528	141810738	(56484821)	C	AluSx1	SINE/Alu	(25)	287	79	2702910
2024	14.0	0.7	3.2	chr3	142554640	142554953	(55740606)	+	AluJr	SINE/Alu	1	306	(6)	2704296
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
630	20.9	6.5	3.1	chr3	143417292	143417454	(54878105)	+	MLT1A	LTR/ERVL-MaLR	4	172	(218)	2705645
41	23.5	1.5	3.8	chr3	143417459	143417589	(54877970)	+	G-rich	Low_complexity	1	133	(0)	2705646
833	22.9	1.1	0.5	chr3	143417629	143417812	(54877747)	+	MLT1A	LTR/ERVL-MaLR	190	374	(0)	2705645
188	37.6	3.4	2.3	chr3	147101584	147101670	(51193889)	C	L2c	LINE/L2	(326)	3061	2974	2710410
43	14.2	1.2	1.2	chr3	147825377	147825457	(50470102)	+	(CCTT)n	Simple_repeat	1	82	(0)	2711274
548	25.4	2.3	0.0	chr3	147825458	147825587	(50469972)	C	FLAM_C	SINE/Alu	(0)	133	1	2711275
306	29.0	9.3	4.9	chr3	147825596	147825820	(50469739)	+	L1M8	LINE/L1	762	997	(1426)	2711276
78	19.3	1.6	3.6	chr3	149378408	149378600	(48916959)	+	GA-rich	Low_complexity	1	196	(0)	2713483
661	29.7	15.1	6.2	chr3	150864646	150865277	(47430282)	C	L2c	LINE/L2	(153)	3234	2554	2715962
12	29.1	3.8	3.6	chr3	151460817	151460896	(46834663)	+	(CCCCAG)n	Simple_repeat	1	83	(0)	2716839
14	17.5	0.0	0.0	chr3	151460978	151461009	(46834550)	+	(GCCCGG)n	Simple_repeat	1	32	(0)	2716840
973	13.7	0.0	0.0	chr3	152667375	152667505	(45628054)	C	FLAM_C	SINE/Alu	(11)	132	2	2718505
1441	21.8	6.2	5.4	chr3	152667506	152667629	(45627930)	+	MLT2C2	LTR/ERVL	268	405	(59)	2718504
31	0.0	5.9	0.0	chr3	152667630	152667663	(45627896)	+	(TC)n	Simple_repeat	1	36	(0)	2718506
1441	21.8	6.2	5.4	chr3	152667664	152667707	(45627852)	+	MLT2C2	LTR/ERVL	406	448	(16)	2718504
434	21.4	3.5	1.8	chr3	152667788	152667901	(45627658)	C	L1M5	LINE/L1	(424)	5700	5585	2718507
250	36.8	10.3	1.0	chr3	153318689	153318729	(44976830)	C	L2a	LINE/L2	(469)	2957	2917	2719598
245	21.4	3.7	1.1	chr3	153318783	153319425	(44976134)	+	GA-rich	Low_complexity	1	667	(0)	2719602
1963	14.3	0.0	0.0	chr3	157071534	157071806	(41223753)	+	AluSz6	SINE/Alu	1	273	(39)	2724928
191	15.2	6.9	0.4	chr3	157071807	157072238	(41223321)	+	GA-rich	Low_complexity	1	462	(0)	2724929
409	35.5	3.5	0.0	chr3	157513384	157513603	(40781956)	C	MamGypLTR3a	LTR/Gypsy	(695)	286	59	2725604
58	20.0	0.0	0.8	chr3	157513671	157513787	(40781772)	+	GA-rich	Low_complexity	1	117	(0)	2725605
228	32.6	1.5	9.2	chr3	158723893	158724034	(39571525)	C	L2c	LINE/L2	(1)	3386	3256	2727187
2386	15.2	11.1	2.8	chr3	158724256	158724716	(39570843)	+	MLT1D	LTR/ERVL-MaLR	1	504	(1)	2727188
12	29.2	2.0	0.0	chr3	159764342	159764391	(38531168)	+	G-rich	Low_complexity	1	51	(0)	2728700
16	4.5	0.0	0.0	chr3	159764483	159764505	(38531054)	+	(GCA)n	Simple_repeat	1	23	(0)	2728701
22	11.7	0.0	0.0	chr3	159764661	159764697	(38530862)	+	(GGA)n	Simple_repeat	1	37	(0)	2728702
3074	15.8	12.4	3.0	chr3	160314875	160315053	(37980506)	C	MER4CL34	LTR/ERV1	(0)	765	595	2729614
40	0.0	0.0	0.0	chr3	160315054	160315090	(37980469)	+	(AGGG)n	Simple_repeat	1	37	(0)	2729615
3074	15.8	12.4	3.0	chr3	160315091	160315601	(37979958)	C	MER4CL34	LTR/ERV1	(171)	594	1	2729614
351	30.9	6.1	2.4	chr3	160315606	160315731	(37979828)	+	MLT1F2-int	LTR/ERVL-MaLR	1042	1172	(215)	2729604
1588	18.4	3.6	7.5	chr3	160840381	160840726	(37454833)	C	MLT2B3	LTR/ERVL	(0)	554	223	2730452
71	9.7	1.0	0.0	chr3	160840727	160840828	(37454731)	+	(AG)n	Simple_repeat	1	103	(0)	2730453
1334	15.4	5.2	0.9	chr3	160840829	160841051	(37454508)	C	MLT2B3	LTR/ERVL	(321)	233	1	2730452
10080	11.6	4.9	0.3	chr3	161590078	161591583	(36703976)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	2731574
12	12.8	8.8	0.0	chr3	162363674	162363707	(35931852)	+	(TGTTG)n	Simple_repeat	1	37	(0)	2732527
5189	16.3	4.6	3.3	chr3	162363811	162364864	(35930695)	+	Tigger2b_Pri	DNA/TcMar-Tigger	1	1068	(0)	2732528
153	24.6	1.6	2.5	chr3	162541985	162542422	(35753137)	+	(TTCC)n	Simple_repeat	1	445	(0)	2732733
705	23.7	1.6	6.1	chr3	165293528	165293725	(33001834)	+	AluJr4	SINE/Alu	86	274	(38)	2736024
114	22.7	2.7	6.0	chr3	165293727	165294135	(33001424)	+	GA-rich	Low_complexity	1	420	(0)	2736025
400	26.6	14.0	0.4	chr3	165476035	165476268	(32819291)	+	L1ME3A	LINE/L1	2999	3269	(2877)	2736287
254	20.9	0.0	1.1	chr3	165476270	165476789	(32818770)	+	GA-rich	Low_complexity	1	520	(0)	2736289
1932	28.5	8.3	4.0	chr3	165476813	165477801	(32817758)	+	L1ME3A	LINE/L1	3328	4391	(1755)	2736287
6640	9.8	1.2	3.4	chr3	167665925	167667230	(30628329)	C	L1MA1	LINE/L1	(4)	6298	5027	2738996
86	18.2	0.5	2.7	chr3	167667231	167667414	(30628145)	+	GA-rich	Low_complexity	1	185	(0)	2738997
1961	23.4	10.5	1.4	chr3	167667419	167668077	(30627482)	+	L1MC4	LINE/L1	7149	7874	(168)	2738995
42	8.0	0.0	0.0	chr3	169604222	169604275	(28691284)	+	(TC)n	Simple_repeat	1	54	(0)	2741538
355	23.5	0.0	0.0	chr3	169604362	169604429	(28691130)	C	MIR3	SINE/MIR	(48)	160	93	2741539
74	9.6	2.4	0.0	chr3	169663443	169663565	(28631994)	+	(CT)n	Simple_repeat	1	126	(0)	2741635
28	9.4	4.8	3.1	chr3	170653731	170653792	(27641767)	+	(CCCCTTC)n	Simple_repeat	1	65	(0)	2743399
13	10.0	0.0	0.0	chr3	170653780	170653801	(27641758)	+	(CTT)n	Simple_repeat	1	22	(0)	2743400
35	12.0	0.0	5.5	chr3	170653793	170653804	(27641755)	+	(TCCCCT)n	Simple_repeat	2	70	(0)	2743401
2389	13.7	1.6	0.7	chr3	170946394	170946812	(27348747)	C	Tigger1	DNA/TcMar-Tigger	(1648)	770	348	2743826
50	14.9	1.9	1.9	chr3	170946813	170946915	(27348644)	+	GA-rich	Low_complexity	1	105	(0)	2743827
1818	17.9	0.5	4.3	chr3	170946916	170947064	(27348495)	C	Tigger1	DNA/TcMar-Tigger	(2038)	380	240	2743826
8512	11.8	12.3	3.0	chr3	170947065	170948278	(27347281)	+	LTR12C	LTR/ERV1	2	1379	(200)	2743828
36	0.0	0.0	0.0	chr3	171524288	171524320	(26771239)	+	(CTG)n	Simple_repeat	1	33	(0)	2744700
23	17.6	2.2	0.0	chr3	171700031	171700075	(26595484)	+	(TC)n	Simple_repeat	1	46	(0)	2744951
264	16.4	1.6	1.6	chr3	171700101	171700162	(26595397)	+	MLT1L	LTR/ERVL-MaLR	6	67	(543)	2744952
256	18.4	5.8	0.0	chr3	171700186	171700234	(26595325)	+	MLT1L	LTR/ERVL-MaLR	105	156	(406)	2744952
286	22.5	2.7	2.7	chr3	171700228	171700300	(26595259)	+	MLT1L	LTR/ERVL-MaLR	207	279	(331)	2744952
27	3.2	0.0	0.0	chr3	171700304	171700335	(26595224)	+	(AC)n	Simple_repeat	1	32	(0)	2744953
48	14.7	0.0	0.0	chr3	171700335	171700411	(26595148)	+	(CT)n	Simple_repeat	1	77	(0)	2744954
329	30.4	3.6	4.3	chr3	171700521	171700661	(26594898)	+	MLT1L	LTR/ERVL-MaLR	471	610	(0)	2744952
42	24.2	0.0	0.0	chr3	173105742	173105854	(25189705)	+	(TTCC)n	Simple_repeat	1	113	(0)	2747128
15	13.9	0.0	0.0	chr3	173120690	173120743	(25174816)	+	(TC)n	Simple_repeat	1	54	(0)	2747154
13	12.6	0.0	9.5	chr3	173585477	173585518	(24710041)	+	(TCCCCT)n	Simple_repeat	1	42	(0)	2747757
15516	16.3	5.0	2.5	chr3	174163432	174170229	(24125330)	C	L1PA16	LINE/L1	(5)	6864	1	2748579
347	29.5	10.2	4.0	chr3	176497708	176497954	(21797605)	C	L1ME4a	LINE/L1	(304)	5820	5557	2751759
42	14.3	2.5	1.2	chr3	176498067	176498146	(21797413)	+	(TC)n	Simple_repeat	1	82	(0)	2751760
1038	18.0	3.4	1.5	chr3	176916914	176917260	(21378299)	+	MER31B	LTR/ERV1	1	514	(0)	2752282
509	17.8	1.2	0.1	chr3	176917261	176917353	(21378206)	C	MER92D	LTR/ERV1	(542)	94	1	2752279
406	32.2	12.3	0.8	chr3	177066610	177066853	(21228706)	C	L2	LINE/L2	(642)	2777	2502	2752518
1033	26.0	5.5	3.4	chr3	177251556	177251898	(21043661)	C	L1ME3	LINE/L1	(0)	6507	6000	2752895
804	9.5	0.9	0.0	chr3	177251900	177252004	(21043555)	C	AluSq2	SINE/Alu	(4)	309	204	2752896
547	16.5	0.0	3.0	chr3	177252011	177252134	(21043425)	C	L1ME3	LINE/L1	(2166)	6002	5891	2752895
71	21.8	1.7	1.7	chr3	178368291	178368464	(19927095)	+	(CTTC)n	Simple_repeat	1	177	(0)	2754587
68	22.7	2.4	0.6	chr3	178535118	178535285	(19760274)	+	GA-rich	Low_complexity	1	172	(0)	2754832
12	24.9	2.0	3.9	chr3	179148365	179148415	(19147144)	+	(TGC)n	Simple_repeat	1	52	(0)	2755688
18	28.2	1.3	2.6	chr3	179148416	179148454	(19147105)	+	(CCGCTG)n	Simple_repeat	5	92	(0)	2755689
12	5.5	0.0	0.0	chr3	179148530	179148548	(19147011)	+	(CGC)n	Simple_repeat	1	19	(0)	2755690
2346	16.6	4.1	3.4	chr3	180881095	180881628	(17413931)	+	LTR9	LTR/ERV1	113	645	(0)	2758465
575	30.1	8.6	7.9	chr3	180881632	180881740	(17413819)	C	HAL1	LINE/L1	(371)	2136	2021	2758466
16	16.5	0.0	0.0	chr3	181715111	181715137	(16580422)	+	(T)n	Simple_repeat	1	27	(0)	2759753
56	0.0	0.0	0.0	chr3	181715434	181715483	(16580076)	+	(T)n	Simple_repeat	1	50	(0)	2759754
2328	9.2	0.0	0.0	chr3	182740114	182740405	(15555154)	+	AluSc	SINE/Alu	6	297	(12)	2761490
1752	19.5	1.6	0.7	chr3	183596776	183597083	(14698476)	+	AluJo	SINE/Alu	1	311	(1)	2762990
46	13.9	0.0	7.8	chr3	183597084	183597198	(14698361)	+	GA-rich	Low_complexity	1	115	(0)	2762991
278	28.8	9.4	4.3	chr3	185749257	185749488	(12546071)	C	MER124	DNA?	(80)	317	73	2767015
327	22.1	0.0	5.5	chr3	185763732	185763822	(12531737)	+	L1ME4a	LINE/L1	5980	6065	(59)	2767040
285	26.0	5.7	4.5	chr3	185764123	185764279	(12531280)	C	L1ME4a	LINE/L1	(5)	6119	5961	2767041
21	20.4	2.2	0.0	chr3	187291814	187291859	(11003700)	+	(CT)n	Simple_repeat	1	47	(0)	2769896
14	24.1	7.1	1.3	chr3	187291860	187291882	(11003677)	+	(CCTCTT)n	Simple_repeat	2	75	(0)	2769897
38	0.0	0.0	0.0	chr3	187292016	187292048	(11003511)	+	(TG)n	Simple_repeat	1	33	(0)	2769898
21	7.5	0.0	0.0	chr3	187292049	187292076	(11003483)	+	(AG)n	Simple_repeat	1	28	(0)	2769899
96	22.6	3.2	4.2	chr3	188433568	188433803	(9861756)	+	GA-rich	Low_complexity	1	233	(0)	2771902
149	15.7	2.5	2.5	chr3	188511030	188511347	(9784212)	+	(TCCC)n	Simple_repeat	1	326	(0)	2772028
18	20.3	3.7	1.8	chr3	191199052	191199105	(7096454)	+	GA-rich	Low_complexity	1	56	(0)	2776192
425	32.3	12.4	5.8	chr3	192876154	192876905	(5418654)	+	L2c	LINE/L2	2416	3207	(180)	2778602
763	24.8	6.9	4.6	chr3	193992508	193992748	(4302811)	+	LTR16	LTR/ERVL	61	307	(131)	2780331
119	8.1	7.7	0.0	chr3	193992750	193992958	(4302601)	+	GA-rich	Low_complexity	1	225	(0)	2780332
471	21.8	3.5	0.0	chr3	193992978	193993087	(4302472)	C	L1MEj	LINE/L1	(713)	1447	1334	2780333
2250	10.0	0.7	0.3	chr3	194620744	194621042	(3674517)	+	AluSz6	SINE/Alu	1	300	(12)	2781523
1435	19.8	13.3	3.6	chr3	194621043	194621414	(3674145)	+	MLT1C	LTR/ERVL-MaLR	37	466	(1)	2781522
2125	11.3	2.0	0.3	chr3	194621719	194622010	(3673549)	C	AluSx1	SINE/Alu	(14)	298	2	2781524
1117	14.5	4.8	0.0	chr3	196811387	196811545	(1484014)	C	AluSx	SINE/Alu	(9)	303	137	2785807
325	31.4	7.0	8.2	chr3	197433708	197433888	(861671)	C	MLT1O	LTR/ERVL-MaLR	(337)	205	27	2786895
28	8.1	0.0	0.0	chr3	197941125	197941164	(354395)	+	(TCCT)n	Simple_repeat	1	40	(0)	2787856
79	37.1	3.5	1.0	chr3	197941165	197941560	(353999)	+	(CTCT)n	Simple_repeat	1	410	(0)	2787857
2449	4.6	0.0	0.3	chr4	1879234	1879518	(188335037)	C	AluYm1	SINE/Alu	(27)	284	1	2790744
1516	18.4	5.9	8.1	chr4	2142433	2142851	(188071704)	+	L1MDa	LINE/L1	15	423	(6210)	2791146
602	18.8	0.8	0.8	chr4	2142872	2142989	(188071566)	+	MER31B	LTR/ERV1	273	390	(76)	2791147
281	23.0	6.3	0.0	chr4	2142962	2143035	(188071520)	+	MER67D	LTR/ERV1	432	510	(4)	2791148
3846	14.7	7.6	0.7	chr4	2143040	2143812	(188070743)	+	L1MDa	LINE/L1	3339	4169	(2368)	2791146
18	20.3	3.9	0.0	chr4	3074605	3074655	(187139900)	+	(GCCGCC)n	Simple_repeat	1	53	(0)	2792718
67	1.6	0.0	0.0	chr4	3074877	3074940	(187139615)	+	(CAG)n	Simple_repeat	1	64	(0)	2792719
54	20.4	0.0	0.0	chr4	3074941	3075052	(187139503)	+	(CGC)n	Simple_repeat	1	112	(0)	2792720
151	18.4	0.7	0.7	chr4	3674873	3675164	(186539391)	+	(CCTC)n	Simple_repeat	1	294	(0)	2793459
2052	15.0	1.9	0.3	chr4	3916826	3917131	(186297424)	+	AluSq2	SINE/Alu	1	311	(2)	2793803
85	29.9	3.0	0.0	chr4	3917132	3917402	(186297153)	+	GA-rich	Low_complexity	1	279	(0)	2793804
2014	10.2	1.1	2.5	chr4	5457586	5457868	(184756687)	+	AluSp	SINE/Alu	1	279	(34)	2796606
57	15.0	0.0	1.0	chr4	5457874	5457987	(184756568)	+	GA-rich	Low_complexity	1	112	(0)	2796607
765	27.8	9.2	5.7	chr4	6633768	6633993	(183580562)	+	L1M5	LINE/L1	2642	2869	(3277)	2798782
493	19.2	1.2	1.2	chr4	7448378	7449391	(182765164)	+	(CCTC)n	Simple_repeat	1	1026	(0)	2800161
355	28.9	9.5	5.0	chr4	7449403	7449562	(182764993)	+	MIRb	SINE/MIR	23	190	(78)	2800162
37	15.7	3.4	6.6	chr4	7574543	7574659	(182639896)	+	GA-rich	Low_complexity	1	121	(0)	2800338
272	21.1	8.4	0.0	chr4	7597060	7597135	(182617420)	C	MER92B	LTR/ERV1	(8)	628	546	2800385
515	25.5	15.4	0.0	chr4	7597717	7597908	(182616647)	C	MER92B	LTR/ERV1	(52)	584	358	2800385
286	20.9	4.2	7.1	chr4	7597924	7597960	(182616595)	C	MER92B	LTR/ERV1	(385)	251	220	2800385
2404	10.5	0.0	0.0	chr4	7597961	7598266	(182616289)	C	AluSg	SINE/Alu	(4)	306	1	2800386
667	17.5	21.1	0.0	chr4	7676339	7676555	(182538000)	C	MER58D	DNA/hAT-Charlie	(0)	386	112	2800526
92	29.9	2.8	1.3	chr4	7676632	7677088	(182537467)	+	(TC)n	Simple_repeat	1	464	(0)	2800527
1058	25.6	6.3	3.2	chr4	8548299	8548706	(181665849)	+	MLT2B1	LTR/ERVL	7	524	(38)	2801925
68	1.4	2.8	0.0	chr4	8548707	8548778	(181665777)	+	(TCTCCTC)n	Simple_repeat	1	74	(0)	2801926
715	20.7	12.4	1.7	chr4	8548779	8548816	(181665739)	+	MLT2B1	LTR/ERVL	525	561	(1)	2801925
377	25.0	0.0	1.2	chr4	8548828	8548912	(181665643)	+	MER63D	DNA/hAT-Blackjack	300	383	(678)	2801927
214	34.7	8.4	7.4	chr4	8575474	8575769	(181638786)	+	L2b	LINE/L2	3038	3346	(41)	2801971
114	21.4	0.4	0.0	chr4	8575915	8576143	(181638412)	+	(TCTC)n	Simple_repeat	1	230	(0)	2801972
245	31.9	0.9	1.7	chr4	8576292	8576406	(181638149)	C	L1ME4a	LINE/L1	(5)	6119	6006	2801973
28	5.9	0.0	0.0	chr4	8576544	8576579	(181637976)	+	(CTCC)n	Simple_repeat	1	36	(0)	2801974
1936	15.5	3.6	0.0	chr4	8576586	8576770	(181637785)	C	AluSg	SINE/Alu	(1)	309	123	2801975
266	33.6	10.5	3.5	chr4	11234947	11235088	(178979467)	+	L2	LINE/L2	2672	2824	(595)	2805858
31	7.0	0.0	2.1	chr4	11235123	11235170	(178979385)	+	(CCCTC)n	Simple_repeat	1	48	(0)	2805859
376	14.3	0.0	3.2	chr4	12945678	12945759	(177268796)	+	L1MC3	LINE/L1	6793	6904	(978)	2808539
100	17.2	1.5	1.0	chr4	12945760	12945958	(177268597)	+	GA-rich	Low_complexity	1	202	(0)	2808540
3689	19.1	5.6	0.6	chr4	12945964	12946829	(177267726)	+	L1MC3	LINE/L1	6873	7784	(1)	2808539
1441	19.5	2.0	6.0	chr4	13141832	13142077	(177072478)	+	MLT1A0	LTR/ERVL-MaLR	122	353	(12)	2808858
248	14.6	7.9	0.0	chr4	13142085	13142166	(177072389)	+	MER58B	DNA/hAT-Charlie	67	155	(186)	2808860
409	19.3	0.0	0.0	chr4	13142136	13142223	(177072332)	+	Cheshire	DNA/hAT-Charlie	2067	2154	(266)	2808861
21	23.4	7.1	4.4	chr4	13142226	13142351	(177072204)	+	GA-rich	Low_complexity	1	135	(0)	2808862
667	34.2	4.1	0.0	chr4	13142360	13142593	(177071962)	C	MIRb	SINE/MIR	(20)	248	5	2808863
16	4.5	0.0	0.0	chr4	13142644	13142666	(177071889)	+	(TTTG)n	Simple_repeat	1	23	(0)	2808864
1693	32.7	5.6	2.7	chr4	13556899	13557813	(176656742)	C	L2a	LINE/L2	(810)	2609	1667	2809478
367	13.1	0.0	0.0	chr4	13557849	13557909	(176656646)	C	L1M4a2	LINE/L1	(1241)	1415	1355	2809489
22	19.5	0.0	0.0	chr4	15003113	15003159	(175211396)	+	(CCT)n	Simple_repeat	1	47	(0)	2811955
14	8.1	3.9	0.0	chr4	15003176	15003201	(175211354)	+	(AGC)n	Simple_repeat	1	27	(0)	2811956
174	21.3	0.0	0.3	chr4	15350016	15350363	(174864192)	+	G-rich	Low_complexity	1	348	(0)	2812501
1616	21.1	5.7	2.7	chr4	15643946	15644389	(174570166)	+	MER31B	LTR/ERV1	1	458	(8)	2812983
2907	16.9	1.1	0.9	chr4	16725313	16725862	(173488693)	+	MER89	LTR/ERV1	2	552	(7)	2814825
62	15.9	4.8	2.0	chr4	16725867	16726012	(173488543)	+	(AT)n	Simple_repeat	1	153	(0)	2814826
17	15.6	0.0	0.0	chr4	16898575	16898603	(173315952)	+	(AC)n	Simple_repeat	1	29	(0)	2815165
81	13.1	2.4	3.5	chr4	16898667	16898836	(173315719)	+	G-rich	Low_complexity	1	174	(0)	2815166
76	0.0	0.0	0.0	chr4	16898838	16898902	(173315653)	+	(GA)n	Simple_repeat	1	65	(0)	2815167
79	2.3	2.2	1.1	chr4	16926774	16926863	(173287692)	+	(TCTT)n	Simple_repeat	1	92	(0)	2815228
34	6.4	0.0	3.7	chr4	16926866	16926919	(173287636)	+	(CTCC)n	Simple_repeat	1	54	(0)	2815229
22	17.3	0.0	2.1	chr4	16926921	16926968	(173287587)	+	(TTCC)n	Simple_repeat	1	48	(0)	2815230
453	12.7	0.0	0.0	chr4	16926970	16927040	(173287515)	C	MER41B	LTR/ERV1	(83)	551	481	2815231
324	27.8	3.8	2.1	chr4	17614255	17614388	(172600167)	C	MIR3	SINE/MIR	(78)	152	20	2816582
659	13.7	4.3	0.7	chr4	18611496	18612759	(171601796)	+	GA-rich	Low_complexity	1	1319	(0)	2818171
15	13.3	3.0	0.0	chr4	18612815	18612847	(171601708)	+	(CTGCTT)n	Simple_repeat	1	34	(0)	2818172
189	35.5	0.0	0.0	chr4	18612853	18612914	(171601641)	C	MIR	SINE/MIR	(13)	249	188	2818173
2204	14.4	0.0	2.0	chr4	18612916	18613261	(171601294)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	2818174
858	18.0	3.3	2.2	chr4	20675875	20676056	(169538499)	C	MLT1A	LTR/ERVL-MaLR	(2)	372	189	2821268
808	16.9	1.3	0.0	chr4	20676222	20676375	(169538180)	C	MLT1A	LTR/ERVL-MaLR	(218)	156	1	2821268
242	19.2	3.1	3.0	chr4	21321572	21322191	(168892364)	+	GA-rich	Low_complexity	1	639	(0)	2822314
42	13.0	0.0	0.0	chr4	21380408	21380500	(168834055)	+	(GAGAGA)n	Simple_repeat	1	93	(0)	2822395
490	26.0	14.7	2.0	chr4	26422854	26423108	(163791447)	C	L1MC5	LINE/L1	(308)	8996	8704	2831032
847	20.0	7.8	4.0	chr4	26423110	26423482	(163791073)	C	MER31B	LTR/ERV1	(1)	660	5	2831033
50	23.3	4.8	1.7	chr4	27108263	27108427	(163106128)	+	GA-rich	Low_complexity	1	173	(0)	2832093
42	0.0	0.0	0.0	chr4	30716894	30716931	(159497624)	+	(AGC)n	Simple_repeat	1	38	(0)	2837087
21	13.4	0.0	0.0	chr4	30717035	30717067	(159497488)	+	(G)n	Simple_repeat	1	33	(0)	2837088
13	18.8	4.5	2.2	chr4	30719608	30719651	(159494904)	+	(CCTCCCT)n	Simple_repeat	1	46	(0)	2837090
44	21.5	6.1	0.0	chr4	30720221	30720242	(159494313)	+	GA-rich	Low_complexity	1	135	(0)	2837091
30	20.2	5.7	2.7	chr4	30720243	30720347	(159494208)	+	G-rich	Low_complexity	1	111	(0)	2837092
149	18.6	2.5	3.2	chr4	31056396	31056759	(159157796)	+	A-rich	Low_complexity	1	373	(0)	2837546
912	11.4	0.0	0.0	chr4	31056766	31056879	(159157676)	C	AluSx	SINE/Alu	(198)	114	1	2837547
3253	34.1	11.4	9.4	chr4	34810554	34810712	(155403843)	+	L2a	LINE/L2	2749	2896	(523)	2842608
1377	23.0	5.3	6.1	chr4	34810713	34811270	(155403285)	C	MER67C	LTR/ERV1	(0)	514	1	2842611
260	26.6	11.7	0.9	chr4	37069672	37069785	(153144770)	C	MER67C	LTR/ERV1	(3)	511	384	2845613
1426	17.7	8.5	8.5	chr4	37069847	37070217	(153144338)	C	MER67C	LTR/ERV1	(311)	400	1	2845613
2101	14.7	3.4	0.3	chr4	40295866	40296207	(149918348)	C	MLT2D	LTR/ERVL	(56)	358	6	2851696
225	27.0	3.1	1.6	chr4	40395769	40395832	(149818723)	C	MLT1N2	LTR/ERVL-MaLR	(479)	83	19	2851923
376	20.9	9.8	0.9	chr4	42193356	42193466	(148021089)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	441	2855226
18	17.5	0.0	0.0	chr4	42193579	42193611	(148020944)	+	(CT)n	Simple_repeat	1	33	(0)	2855227
713	31.4	5.7	5.2	chr4	42193627	42194026	(148020529)	C	HAL1b	LINE/L1	(1644)	777	376	2855225
1392	23.1	6.6	8.8	chr4	44128404	44128929	(146085626)	C	MER67D	LTR/ERV1	(0)	514	1	2857858
43	4.3	0.0	0.0	chr4	48653808	48653855	(141560700)	+	(AGC)n	Simple_repeat	1	48	(0)	2864172
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
1130	13.8	0.3	0.1	chr4	49514156	49515857	(140698698)	+	ACRO1	Satellite/acro	1	1705	(0)	2865184
406	18.9	2.2	0.5	chr4	49573746	49573848	(140640707)	+	MSTA	LTR/ERVL-MaLR	4	113	(262)	2865274
271	21.9	1.9	0.4	chr4	49573937	49574021	(140640534)	+	THE1D-int	LTR/ERVL-MaLR	959	1064	(587)	2865275
839	22.6	15.8	2.1	chr4	49573984	49574223	(140640332)	C	THE1D-int	LTR/ERVL-MaLR	(398)	1233	955	2865276
867	26.6	5.5	4.6	chr4	49574228	49574534	(140640021)	+	MSTA	LTR/ERVL-MaLR	76	385	(43)	2865274
277	19.6	1.8	0.0	chr4	49576829	49576884	(140637671)	+	THE1D-int	LTR/ERVL-MaLR	959	1015	(616)	2865280
931	20.6	15.2	2.6	chr4	49576883	49577116	(140637439)	C	THE1D-int	LTR/ERVL-MaLR	(408)	1223	955	2865281
513	28.1	5.1	2.4	chr4	49577139	49577352	(140637203)	+	MSTA	LTR/ERVL-MaLR	98	310	(71)	2865279
290	20.4	3.1	1.2	chr4	49577303	49577392	(140637163)	C	HSAT5	Satellite	(7)	91	1	2865282
285	26.1	0.0	1.8	chr4	49577533	49577634	(140636921)	C	HSAT5	Satellite	(1)	100	1	2865283
639	7.7	0.0	0.6	chr4	49577855	49577952	(140636603)	C	HSAT5	Satellite	(3)	97	1	2865284
149	17.9	1.7	1.0	chr4	51966059	51966356	(138248199)	+	(TTCC)n	Simple_repeat	1	303	(0)	2865540
2117	16.4	0.3	0.0	chr4	51966357	51966654	(138247901)	C	AluJb	SINE/Alu	(13)	299	1	2865541
104	19.2	2.6	3.0	chr4	52077178	52077441	(138137114)	+	(TCCT)n	Simple_repeat	1	271	(0)	2865691
16	21.3	2.6	0.0	chr4	52077495	52077532	(138137023)	+	(AT)n	Simple_repeat	1	39	(0)	2865692
1646	26.6	11.3	2.5	chr4	52987883	52988444	(137226111)	+	LTR78	LTR/ERV1	687	1304	(0)	2867079
1955	15.5	0.7	0.0	chr4	53006999	53007275	(137207280)	+	AluJr4	SINE/Alu	1	279	(33)	2867110
66	8.1	2.1	0.0	chr4	53007277	53007370	(137207185)	+	(GA)n	Simple_repeat	1	96	(0)	2867111
26	16.0	0.0	1.9	chr4	53007351	53007403	(137207152)	+	GA-rich	Low_complexity	1	53	(0)	2867112
37	0.0	0.0	0.0	chr4	53007404	53007438	(137207117)	+	(AGGGAGGG)n	Simple_repeat	1	35	(0)	2867113
757	28.3	1.8	0.8	chr4	53007491	53007706	(137206849)	+	MIR	SINE/MIR	3	223	(7)	2867114
14	9.6	0.0	0.0	chr4	54064473	54064495	(136150060)	+	(CCG)n	Simple_repeat	1	23	(0)	2868661
34	24.0	0.0	0.0	chr4	54064666	54064748	(136149807)	+	G-rich	Low_complexity	1	83	(0)	2868662
1780	17.9	11.5	14.5	chr4	56191132	56191654	(134022901)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2872209
215	16.1	3.6	2.2	chr4	56687915	56688389	(133526166)	+	GA-rich	Low_complexity	1	492	(0)	2873069
313	32.3	8.6	4.1	chr4	57017755	57018085	(133196470)	C	L2c	LINE/L2	(24)	3402	3034	2873833
405	35.4	12.8	4.4	chr4	57018174	57018835	(133195720)	C	L2c	LINE/L2	(535)	2884	2159	2873833
293	12.5	0.0	0.0	chr4	60423487	60423929	(129790626)	+	(AGGG)n	Simple_repeat	1	443	(0)	2878166
49	25.2	3.5	0.0	chr4	61199939	61200082	(129014473)	+	GA-rich	Low_complexity	1	149	(0)	2879115
42	15.8	0.0	0.0	chr4	63606167	63606237	(126608318)	+	GA-rich	Low_complexity	1	71	(0)	2882188
207	27.5	6.8	0.0	chr4	67509434	67509502	(122705053)	+	L2c	LINE/L2	2259	2332	(1087)	2887044
2434	21.1	4.4	0.8	chr4	69867993	69868580	(120345975)	+	ERVL-int	LTR/ERVL	2878	3730	(2027)	2889878
6073	9.5	3.2	1.2	chr4	69868585	69869545	(120345010)	+	MER4-int	LTR/ERV1	1498	2477	(4121)	2889879
959	19.1	0.6	0.0	chr4	69984028	69984200	(120230355)	+	LTR18B	LTR/ERVL	3	176	(438)	2890041
13	15.7	4.2	6.0	chr4	69984228	69984275	(120230280)	+	(GCT)n	Simple_repeat	1	50	(0)	2890042
608	23.1	7.3	3.3	chr4	69984341	69984550	(120230005)	+	LTR18B	LTR/ERVL	383	601	(13)	2890041
17	13.1	0.0	0.0	chr4	70932382	70932407	(119282148)	+	(T)n	Simple_repeat	1	26	(0)	2891511
369	31.1	9.3	3.7	chr4	70932441	70932683	(119281872)	C	MIRb	SINE/MIR	(0)	262	2	2891512
29	32.6	0.8	1.6	chr4	73258540	73258660	(116955895)	+	(GCC)n	Simple_repeat	1	122	(0)	2894656
27	20.4	1.6	0.0	chr4	73258763	73258824	(116955731)	+	(GCC)n	Simple_repeat	1	63	(0)	2894657
23	25.4	1.4	1.4	chr4	73258825	73258834	(116955721)	+	(GCCACC)n	Simple_repeat	1	73	(0)	2894658
27	7.0	4.4	0.0	chr4	73258871	73258915	(116955640)	+	(GGGA)n	Simple_repeat	1	47	(0)	2894659
231	24.2	1.6	1.6	chr4	74058195	74058257	(116156298)	C	MLT1G1	LTR/ERVL-MaLR	(181)	398	336	2895661
20	11.4	1.8	7.1	chr4	74058437	74058491	(116156064)	+	(CTCTCTT)n	Simple_repeat	1	56	(0)	2895662
23	14.4	3.5	3.4	chr4	74299332	74299388	(115915167)	+	(TAG)n	Simple_repeat	1	59	(0)	2895983
40	4.5	0.0	0.0	chr4	74299390	74299435	(115915120)	+	(AGCAGT)n	Simple_repeat	1	46	(0)	2895984
429	32.5	6.9	4.2	chr4	74885018	74885271	(115329284)	C	MamGypLTR2c	LTR/Gypsy	(55)	1013	750	2896818
2188	15.6	7.9	2.3	chr4	74885272	74885710	(115328845)	C	MER31B	LTR/ERV1	(0)	466	1	2896819
17	4.3	0.0	0.0	chr4	75122222	75122245	(115092310)	+	(TATC)n	Simple_repeat	1	24	(0)	2897117
217	22.4	3.7	4.5	chr4	75122326	75123080	(115091475)	+	GA-rich	Low_complexity	1	749	(0)	2897118
14	19.4	2.3	2.3	chr4	75724900	75724942	(114489613)	+	G-rich	Low_complexity	1	44	(0)	2897949
1807	17.2	0.0	0.4	chr4	76125352	76125624	(114088931)	+	AluJr	SINE/Alu	1	272	(40)	2898748
290	19.8	1.7	2.1	chr4	76126018	76126096	(114088459)	+	L4_A_Mam	LINE/RTE-X	3617	3720	(1270)	2898749
1956	14.8	12.4	1.1	chr4	76462483	76462666	(113751889)	+	MSTA	LTR/ERVL-MaLR	1	211	(217)	2899289
88	5.2	0.0	0.0	chr4	76462667	76462766	(113751789)	+	(TCTCCC)n	Simple_repeat	1	100	(0)	2899290
1956	14.8	12.4	1.1	chr4	76462767	76462958	(113751597)	+	MSTA	LTR/ERVL-MaLR	212	426	(2)	2899289
925	16.0	0.0	0.0	chr4	76662756	76662880	(113551675)	+	AluJo	SINE/Alu	157	281	(31)	2899637
54	9.9	2.3	0.0	chr4	76662881	76662968	(113551587)	+	(GAGGGA)n	Simple_repeat	1	90	(0)	2899638
43	23.6	4.0	0.0	chr4	77907465	77907584	(112306971)	+	(TCTC)n	Simple_repeat	1	125	(0)	2901399
2161	11.8	0.4	0.0	chr4	77907585	77907863	(112306692)	C	AluSz	SINE/Alu	(32)	280	1	2901400
2073	10.9	0.0	1.1	chr4	78577997	78578272	(111636283)	+	AluSx	SINE/Alu	1	273	(39)	2902339
46	2.3	0.0	0.0	chr4	78578287	78578330	(111636225)	+	(GA)n	Simple_repeat	1	44	(0)	2902340
46	12.4	0.0	0.0	chr4	78578332	78578404	(111636151)	+	(AGGG)n	Simple_repeat	1	73	(0)	2902341
292	32.3	5.7	0.0	chr4	78578422	78578520	(111636035)	+	MIRb	SINE/MIR	2	106	(162)	2902342
339	27.4	1.0	1.0	chr4	78936071	78936166	(111278389)	+	MIR3	SINE/MIR	89	184	(24)	2902968
277	31.7	5.5	6.0	chr4	79553488	79553819	(110660736)	C	L2-3_Crp	LINE/L2	(1136)	960	631	2903750
53	21.0	0.0	0.9	chr4	79553826	79553940	(110660615)	+	(TCCC)n	Simple_repeat	1	115	(0)	2903751
28	21.7	0.0	5.0	chr4	79553890	79553969	(110660586)	+	(TCTT)n	Simple_repeat	1	80	(0)	2903752
3555	4.9	0.5	0.2	chr4	79553970	79554416	(110660139)	C	LTR7	LTR/ERV1	(2)	448	1	2903753
25	32.3	2.2	0.0	chr4	80197531	80197620	(110016935)	+	(CT)n	Simple_repeat	1	92	(0)	2904518
35	29.7	1.1	5.5	chr4	82373481	82373661	(107840894)	+	(CGC)n	Simple_repeat	1	183	(0)	2907493
55	21.5	0.0	0.0	chr4	82710798	82710913	(107503642)	+	GA-rich	Low_complexity	1	116	(0)	2908085
553	24.7	12.3	1.1	chr4	82710951	82711130	(107503425)	+	MIRb	SINE/MIR	38	244	(24)	2908086
441	27.1	10.1	3.2	chr4	84293112	84293343	(105921212)	C	MIR	SINE/MIR	(27)	241	5	2910921
66	0.0	0.0	0.0	chr4	85827462	85827517	(104387038)	+	(GT)n	Simple_repeat	1	56	(0)	2913040
22	35.3	1.9	0.9	chr4	86708915	86709017	(103505538)	+	(TCCC)n	Simple_repeat	1	105	(0)	2914251
34	5.5	0.0	0.0	chr4	86709059	86709096	(103505459)	+	(AC)n	Simple_repeat	1	38	(0)	2914252
15	20.1	2.5	0.0	chr4	86709102	86709141	(103505414)	+	(TGGA)n	Simple_repeat	1	41	(0)	2914253
653	31.1	8.6	4.7	chr4	86878406	86878749	(103335806)	+	L1M3d	LINE/L1	1	359	(5532)	2914512
3932	22.1	4.5	5.1	chr4	86878915	86879838	(103334717)	+	L1M4c	LINE/L1	627	2384	(873)	2914513
20	0.0	0.0	0.0	chr4	87069272	87069293	(103145262)	+	(T)n	Simple_repeat	1	22	(0)	2914866
40	25.8	4.5	8.0	chr4	87069357	87069666	(103144889)	+	(TTCC)n	Simple_repeat	1	324	(0)	2914867
4296	14.6	4.9	6.5	chr4	87697307	87698424	(102516131)	C	MER52C	LTR/ERV1	(0)	1278	15	2915939
1274	20.9	10.2	13.7	chr4	87698427	87698669	(102515886)	C	L1ME2	LINE/L1	(215)	6122	5847	2915938
29	25.9	1.2	1.2	chr4	87930738	87930818	(102283737)	+	GA-rich	Low_complexity	1	82	(0)	2916249
725	25.0	11.1	1.6	chr4	87930923	87931278	(102283277)	+	L1ME3B	LINE/L1	5625	6056	(108)	2916250
17	20.6	0.0	0.0	chr4	88823320	88823358	(101391197)	+	(CTC)n	Simple_repeat	1	39	(0)	2917721
32	8.3	2.0	0.0	chr4	88823366	88823416	(101391139)	+	(CCT)n	Simple_repeat	1	52	(0)	2917722
70	1.2	5.6	1.1	chr4	89356532	89356620	(100857935)	+	(TTTC)n	Simple_repeat	1	94	(0)	2918538
60	23.3	2.0	0.7	chr4	89356621	89356770	(100857785)	+	(CTCT)n	Simple_repeat	1	153	(0)	2918539
579	31.7	12.1	5.5	chr4	89356771	89357187	(100857368)	C	HAL1ME	LINE/L1	(1135)	1330	883	2918540
5390	15.8	2.2	0.3	chr4	89640644	89641493	(100573062)	+	LTR1D	LTR/ERV1	1	866	(109)	2918926
262	15.2	4.2	0.0	chr4	89641479	89641524	(100573031)	+	LTR1D	LTR/ERV1	700	747	(0)	2918926
1098	34.5	7.2	4.2	chr4	93646015	93647032	(96567523)	C	L2a	LINE/L2	(0)	3426	2365	2923906
8181	18.7	5.7	1.0	chr4	97820953	97822520	(92392035)	C	MSTA-int	LTR/ERVL-MaLR	(5)	1646	1	2929394
2048	26.8	9.5	10.5	chr4	98372990	98373611	(91840944)	C	L1MEf	LINE/L1	(4476)	2561	1934	2930063
436	32.5	6.6	3.0	chr4	98996849	98997080	(91217475)	+	MIRc	SINE/MIR	4	244	(24)	2931110
21028	29.4	3.9	3.5	chr4	99013920	99021508	(91193047)	C	HERVIP10B3-int	LTR/ERV1	(0)	7603	1	2931140
18	13.7	12.5	0.0	chr4	100325854	100325917	(89888638)	+	A-rich	Low_complexity	1	72	(0)	2932912
18	19.3	3.6	4.4	chr4	100325944	100326046	(89888509)	+	GA-rich	Low_complexity	1	102	(0)	2932913
2619	6.4	0.0	0.0	chr4	101439323	101439633	(88774922)	+	AluY	SINE/Alu	1	311	(0)	2934377
47	0.0	0.0	0.0	chr4	101439643	101439682	(88774873)	+	(GA)n	Simple_repeat	1	40	(0)	2934378
17	10.4	6.5	0.0	chr4	101439696	101439726	(88774829)	+	(CT)n	Simple_repeat	1	33	(0)	2934379
289	29.3	5.3	9.7	chr4	101528209	101528443	(88686112)	C	Charlie23a	DNA/hAT-Charlie	(94)	245	22	2934493
1889	16.2	7.4	14.1	chr4	101528444	101528997	(88685558)	C	MER67D	LTR/ERV1	(0)	514	1	2934494
628	26.6	11.4	6.4	chr4	101886896	101887176	(88327379)	+	MLT1J	LTR/ERVL-MaLR	13	309	(203)	2934934
251	17.9	4.3	5.6	chr4	101887234	101887304	(88327251)	+	MLT1J	LTR/ERVL-MaLR	440	509	(3)	2934934
1795	18.5	0.3	1.6	chr4	102357326	102357663	(87856892)	+	AluJr	SINE/Alu	1	312	(0)	2935567
30	0.0	0.0	0.0	chr4	102357664	102357691	(87856864)	+	(AGGG)n	Simple_repeat	1	28	(0)	2935568
65	22.2	3.5	1.1	chr4	102357692	102357834	(87856721)	+	A-rich	Low_complexity	31	177	(0)	2935569
15	17.1	2.4	2.4	chr4	102406100	102406140	(87808415)	+	(TTTTGT)n	Simple_repeat	1	42	(0)	2935631
502	32.6	3.3	0.0	chr4	102565395	102565569	(87648986)	C	L4_C_Mam	LINE/RTE-X	(4347)	791	611	2935848
26	6.1	0.0	0.0	chr4	102565666	102565699	(87648856)	+	(CCTC)n	Simple_repeat	1	34	(0)	2935849
19	23.9	3.2	1.5	chr4	102565704	102565766	(87648789)	+	(TTTC)n	Simple_repeat	1	65	(0)	2935850
1852	14.7	0.7	8.6	chr4	102780031	102780357	(87434198)	+	AluJb	SINE/Alu	1	301	(11)	2936137
23	5.7	0.0	4.9	chr4	102780365	102780405	(87434150)	+	(AGGGG)n	Simple_repeat	1	41	(0)	2936138
326	21.0	39.7	1.4	chr4	102780417	102780573	(87433982)	+	ERVL-E-int	LTR/ERVL	2883	3100	(2567)	2936136
665	27.1	7.3	1.6	chr4	102780625	102780844	(87433711)	+	ERVL-E-int	LTR/ERVL	4873	5167	(590)	2936136
249	32.3	0.0	0.0	chr4	102780859	102780923	(87433632)	+	LTR16D	LTR/ERVL	182	246	(405)	2936139
469	29.2	0.0	0.8	chr4	102780929	102781059	(87433496)	+	LTR16D	LTR/ERVL	521	650	(1)	2936139
4266	10.7	1.0	1.9	chr4	103784819	103785436	(86429119)	+	LTR9	LTR/ERV1	1	612	(0)	2937452
15370	11.9	2.0	3.9	chr4	103785455	103787960	(86426595)	+	HUERS-P3b-int	LTR/ERV1	18	2403	(6516)	2937452
55	21.1	0.0	1.6	chr4	104479718	104479840	(85734715)	+	(TCCC)n	Simple_repeat	1	123	(0)	2938256
18	29.9	0.0	1.6	chr4	104494731	104494793	(85719762)	+	GA-rich	Low_complexity	1	63	(0)	2938271
34	4.0	7.7	0.0	chr4	104494918	104494969	(85719586)	+	(TC)n	Simple_repeat	1	56	(0)	2938272
13	13.0	0.0	7.7	chr4	104495055	104495093	(85719462)	+	G-rich	Low_complexity	1	39	(0)	2938273
62	0.0	4.8	0.0	chr4	106589336	106589398	(83625157)	+	(GA)n	Simple_repeat	1	66	(0)	2941011
75	36.9	3.1	2.9	chr4	106967711	106968220	(83246335)	+	A-rich	Low_complexity	1	526	(0)	2941469
192	27.5	6.8	1.4	chr4	106968342	106968411	(83246144)	C	MIR	SINE/MIR	(113)	149	76	2941470
857	22.6	9.8	0.8	chr4	108542132	108542381	(81672174)	+	ORSL	DNA/hAT-Tip100	1	275	(0)	2943599
25	25.2	3.8	1.2	chr4	108542624	108542702	(81671853)	+	(TC)n	Simple_repeat	1	82	(0)	2943600
330	27.2	10.3	3.6	chr4	108552912	108553163	(81661392)	+	HAL1	LINE/L1	1735	2005	(502)	2943607
716	22.7	8.6	10.2	chr4	108553203	108553674	(81660881)	C	MER31B	LTR/ERV1	(3)	511	1	2943612
21	15.4	0.0	4.2	chr4	108553685	108553732	(81660823)	+	(TTCC)n	Simple_repeat	1	48	(0)	2943613
429	30.2	3.4	6.6	chr4	109185298	109185478	(81029077)	C	MIRc	SINE/MIR	(56)	212	38	2944575
784	23.9	3.8	18.4	chr4	109185581	109186016	(81028539)	+	MLT1A	LTR/ERVL-MaLR	1	370	(4)	2944576
2051	9.7	4.4	1.7	chr4	109731071	109731358	(80483197)	+	AluSx1	SINE/Alu	1	296	(16)	2945439
27	19.9	3.5	3.4	chr4	110636976	110637061	(79577494)	+	(TCTC)n	Simple_repeat	1	89	(0)	2946880
337	27.8	14.9	7.6	chr4	111602508	111602717	(78611838)	+	MER103C	DNA/hAT-Charlie	2	229	(68)	2948009
747	33.3	13.5	5.4	chr4	112181409	112182225	(78032330)	C	L2b	LINE/L2	(5)	3370	2491	2948829
1660	20.5	3.5	4.0	chr4	113636502	113636872	(76577683)	C	MLT1A	LTR/ERVL-MaLR	(5)	369	1	2951069
371	33.9	14.6	0.4	chr4	113656513	113656806	(76557749)	+	L2a	LINE/L2	2814	3161	(265)	2951099
1530	21.0	9.1	0.6	chr4	113656824	113657177	(76557378)	+	MER31B	LTR/ERV1	1	387	(79)	2951100
305	19.7	10.6	1.3	chr4	113657157	113657233	(76557322)	+	MER67A	LTR/ERV1	459	543	(0)	2951101
361	26.9	13.3	4.7	chr4	113657261	113657451	(76557104)	+	L2a	LINE/L2	3211	3420	(6)	2951099
1863	19.6	0.3	0.0	chr4	113947199	113947509	(76267046)	+	AluSz6	SINE/Alu	1	312	(0)	2951484
59	17.5	0.0	4.5	chr4	113947514	113947646	(76266909)	+	GA-rich	Low_complexity	1	133	(0)	2951485
3283	22.9	1.5	2.0	chr4	117193729	117194620	(73019935)	C	L1MB4	LINE/L1	(944)	5803	4917	2955385
1083	25.9	1.6	0.0	chr4	117194617	117194921	(73019634)	C	L1MB4	LINE/L1	(5928)	1692	1383	2955385
225	27.8	4.4	3.6	chr4	119698012	119698123	(70516432)	+	LTR81B	LTR/Gypsy	191	303	(1090)	2958862
1491	11.3	1.8	3.9	chr4	120757468	120757698	(69456857)	+	MLT2B2	LTR/ERVL	6	231	(284)	2960186
15	35.1	0.0	4.9	chr4	120757702	120757782	(69456773)	+	(CTC)n	Simple_repeat	1	81	(0)	2960187
270	19.6	0.0	3.8	chr4	120757783	120757835	(69456720)	+	MLT2B2	LTR/ERVL	182	232	(369)	2960186
18	10.5	2.1	6.1	chr4	120757837	120757859	(69456696)	+	(CTC)n	Simple_repeat	1	22	(0)	2960188
29	2.5	4.7	2.2	chr4	120757860	120757902	(69456653)	+	(CTT)n	Simple_repeat	1	45	(0)	2960189
18	10.5	2.1	6.1	chr4	120757903	120757928	(69456627)	+	(CTC)n	Simple_repeat	1	24	(0)	2960190
1192	23.9	3.9	7.3	chr4	120757930	120758272	(69456283)	+	MLT2B2	LTR/ERVL	224	554	(0)	2960186
3874	18.8	7.3	2.4	chr4	121501704	121502574	(68711981)	C	L1MD3	LINE/L1	(16)	7979	7063	2961144
156	11.2	0.8	1.9	chr4	121502575	121502832	(68711723)	+	(TCCC)n	Simple_repeat	1	260	(0)	2961145
26	21.5	0.0	1.6	chr4	121770209	121770271	(68444284)	+	GA-rich	Low_complexity	1	63	(0)	2961538
56	4.5	2.9	0.0	chr4	121977626	121977693	(68236862)	+	(TC)n	Simple_repeat	1	70	(0)	2961896
211	36.1	12.6	1.1	chr4	121977928	121978399	(68236156)	C	L2c	LINE/L2	(243)	3144	2595	2961897
12	15.3	3.5	0.0	chr4	123997470	123997498	(66217057)	+	(TAATT)n	Simple_repeat	1	30	(0)	2964772
34	5.6	0.0	0.0	chr4	125315055	125315092	(64899463)	+	(TG)n	Simple_repeat	1	38	(0)	2966465
2532	28.3	11.2	1.7	chr4	127771430	127772770	(62441785)	C	L1M5	LINE/L1	(1822)	4324	2848	2969523
2173	11.0	0.7	1.7	chr4	127848295	127848593	(62365962)	+	AluSq2	SINE/Alu	3	298	(15)	2969635
12228	16.3	2.2	4.0	chr4	127848594	127849216	(62365339)	+	L1PA17	LINE/L1	3583	4108	(2807)	2969632
180	35.2	13.4	11.9	chr4	128972968	128973405	(61241150)	+	L2c	LINE/L2	2940	3385	(2)	2971620
53	16.9	4.3	2.8	chr4	128973406	128973543	(61241012)	+	G-rich	Low_complexity	1	144	(0)	2971621
1529	17.8	1.1	3.5	chr4	129087498	129087783	(61126772)	+	AluJr4	SINE/Alu	34	312	(0)	2971738
3066	23.1	3.0	2.0	chr4	129087784	129087809	(61126746)	+	L1MEc	LINE/L1	3865	3889	(2430)	2971737
2013	15.0	2.0	0.3	chr4	129087810	129088103	(61126452)	+	AluJb	SINE/Alu	1	299	(13)	2971739
2135	20.0	5.6	4.3	chr4	129416642	129417148	(60797407)	+	MER67D	LTR/ERV1	1	514	(0)	2972151
1180	25.9	9.9	6.2	chr4	129417149	129417601	(60796954)	C	MER90	LTR/ERV1	(99)	476	1	2972150
47	21.0	0.9	0.0	chr4	133942860	133942888	(56271667)	+	(CTCT)n	Simple_repeat	1	30	(0)	2977524
31	7.5	0.0	0.0	chr4	133942889	133942931	(56271624)	+	(CTTC)n	Simple_repeat	1	43	(0)	2977525
47	21.0	0.9	0.0	chr4	133942932	133943006	(56271549)	+	(CTCT)n	Simple_repeat	3	77	(0)	2977526
1973	11.5	0.3	0.3	chr4	133943143	133943439	(56271116)	C	MER4D1	LTR/ERV1	(603)	297	1	2977527
38	12.0	0.0	0.0	chr4	137775253	137775316	(52439239)	+	(TC)n	Simple_repeat	1	64	(0)	2982079
232	29.4	1.9	0.0	chr4	138206143	138206193	(52008362)	+	Plat_L3	LINE/CR1	3533	3584	(2)	2982589
38	11.0	0.0	0.0	chr4	138206221	138206280	(52008275)	+	(TCTC)n	Simple_repeat	1	60	(0)	2982590
19	21.5	0.0	2.2	chr4	138206379	138206423	(52008132)	+	(AT)n	Simple_repeat	1	45	(0)	2982591
18	4.2	0.0	0.0	chr4	138242309	138242333	(51972222)	+	(CTG)n	Simple_repeat	1	25	(0)	2982633
43	0.0	0.0	0.0	chr4	138833328	138833364	(51381191)	+	(TC)n	Simple_repeat	1	37	(0)	2983428
30	0.0	0.0	0.0	chr4	138833398	138833423	(51381132)	+	(TC)n	Simple_repeat	1	26	(0)	2983428
53	2.8	6.6	1.2	chr4	138833456	138833531	(51381024)	+	(TC)n	Simple_repeat	1	81	(0)	2983428
790	22.2	6.8	8.5	chr4	139163110	139163631	(51050924)	+	MER65-int	LTR/ERV1	1591	2466	(4173)	2984062
1592	18.9	5.5	0.0	chr4	139163632	139163906	(51050649)	+	AluJb	SINE/Alu	1	291	(21)	2984067
76	28.6	2.2	5.8	chr4	139163907	139164274	(51050281)	+	GA-rich	Low_complexity	1	376	(0)	2984068
2540	8.9	0.7	0.0	chr4	139222958	139223259	(50991296)	+	AluSc	SINE/Alu	1	304	(5)	2984217
2303	25.3	3.2	4.0	chr4	139223260	139223608	(50990947)	+	Zaphod	DNA/hAT-Tip100	274	620	(3411)	2984216
2512	24.7	0.9	0.6	chr4	139223609	139224146	(50990409)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	9	2984218
18	7.5	0.0	0.0	chr4	139556235	139556262	(50658293)	+	(GGA)n	Simple_repeat	1	28	(0)	2984844
13	16.4	0.0	5.3	chr4	139556334	139556371	(50658184)	+	(CCCTCGC)n	Simple_repeat	1	38	(0)	2984845
1783	18.8	16.3	0.5	chr4	139610394	139610816	(50603739)	+	MLT1D	LTR/ERVL-MaLR	1	503	(2)	2984960
1216	19.0	1.3	3.5	chr4	139610817	139610977	(50603578)	C	MER58A	DNA/hAT-Charlie	(68)	156	1	2984959
17	4.5	0.0	4.0	chr4	139611013	139611030	(50603525)	+	(TC)n	Simple_repeat	1	18	(0)	2984961
2014	15.5	0.3	0.0	chr4	139611031	139611327	(50603228)	C	AluJb	SINE/Alu	(13)	299	2	2984962
537	25.4	7.7	2.9	chr4	139624156	139624228	(50590327)	+	MER5A	DNA/hAT-Charlie	119	189	(0)	2984995
1486	18.1	9.3	8.2	chr4	139624300	139624837	(50589718)	C	MER67C	LTR/ERV1	(2)	512	2	2984997
46	5.8	0.0	0.0	chr4	139889485	139889539	(50325016)	+	(GCT)n	Simple_repeat	1	55	(0)	2985402
73	6.0	0.0	0.0	chr4	139889904	139889990	(50324565)	+	(TGCTGC)n	Simple_repeat	1	87	(0)	2985403
859	18.6	2.3	1.8	chr4	140811175	140811344	(49403211)	C	MLT2D	LTR/ERVL	(243)	171	1	2986832
58	22.8	3.5	1.1	chr4	141769943	141769988	(48444567)	+	(CCTT)n	Simple_repeat	1	50	(0)	2988103
44	7.4	0.0	0.0	chr4	141769989	141770046	(48444509)	+	(CTCC)n	Simple_repeat	1	58	(0)	2988104
58	22.8	3.5	1.1	chr4	141770047	141770170	(48444385)	+	(CCTT)n	Simple_repeat	3	126	(0)	2988105
688	22.0	7.4	4.7	chr4	142264744	142264953	(47949602)	+	MLT1B	LTR/ERVL-MaLR	1	213	(183)	2988724
37	7.2	0.0	0.0	chr4	142264954	142264998	(47949557)	+	(CT)n	Simple_repeat	1	45	(0)	2988725
986	22.4	0.5	2.1	chr4	142264999	142265215	(47949340)	+	MLT1B	LTR/ERVL-MaLR	189	382	(14)	2988724
17	20.7	3.3	3.2	chr4	143184775	143184834	(47029721)	+	G-rich	Low_complexity	1	62	(0)	2989909
35	2.8	0.0	0.0	chr4	143184837	143184873	(47029682)	+	(GGCGGAGG)n	Simple_repeat	1	37	(0)	2989910
13	24.5	2.3	0.0	chr4	144915139	144915181	(45299374)	+	(AATATAA)n	Simple_repeat	1	44	(0)	2992200
860	29.5	3.1	1.4	chr4	145328049	145328337	(44886218)	+	L2a	LINE/L2	3095	3388	(38)	2992751
73	17.0	1.2	3.6	chr4	145328348	145328513	(44886042)	+	GA-rich	Low_complexity	1	168	(0)	2992752
100	13.4	7.1	1.6	chr4	145878560	145878798	(44335757)	+	A-rich	Low_complexity	1	256	(0)	2993530
3522	17.3	3.9	1.0	chr4	147648049	147648727	(42565828)	+	MER21B	LTR/ERVL	1	687	(181)	2995949
950	23.5	12.4	1.2	chr4	147649078	147649405	(42565150)	C	MSTD	LTR/ERVL-MaLR	(25)	371	2	2995950
18469	10.8	4.5	1.3	chr4	151488921	151492330	(38722225)	+	L1PBa	LINE/L1	1	3487	(3375)	3001586
429	31.1	1.5	0.8	chr4	153808189	153808321	(36406234)	C	MIR3	SINE/MIR	(11)	197	64	3005211
1895	16.6	5.5	0.3	chr4	153808970	153809143	(36405412)	C	AluJb	SINE/Alu	(5)	307	117	3005212
232	35.6	4.9	4.0	chr4	153897257	153897458	(36317097)	C	L2c	LINE/L2	(260)	3127	2924	3005317
26	22.4	1.3	2.6	chr4	154491788	154491863	(35722692)	+	G-rich	Low_complexity	1	77	(0)	3006119
13	25.2	0.0	2.3	chr4	154491937	154491980	(35722575)	+	(CGCCTC)n	Simple_repeat	1	44	(0)	3006120
397	30.7	6.3	4.8	chr4	155319164	155319351	(34895204)	C	MIR	SINE/MIR	(51)	211	21	3007222
276	24.4	4.5	1.1	chr4	155319383	155319451	(34895104)	C	L2a	LINE/L2	(57)	3369	3298	3007223
1909	21.9	3.9	5.2	chr4	155319452	155319972	(34894583)	C	MER67D	LTR/ERV1	(0)	514	1	3007224
1426	30.7	6.9	4.1	chr4	155612062	155612735	(34601820)	+	L2a	LINE/L2	2662	3374	(52)	3007675
255	38.1	2.8	4.7	chr4	156758447	156758702	(33455853)	C	L2c	LINE/L2	(588)	2831	2581	3009218
1800	15.5	3.2	1.1	chr4	156900562	156900839	(33313716)	+	AluJb	SINE/Alu	4	287	(25)	3009392
56	22.6	1.8	3.6	chr4	156900840	156900992	(33313563)	+	GA-rich	Low_complexity	10	162	(0)	3009393
250	23.0	4.4	3.3	chr4	156901092	156901187	(33313368)	C	MER5B	DNA/hAT-Charlie	(3)	186	90	3009394
3536	18.3	2.0	0.5	chr4	159150164	159150801	(31063754)	C	Tigger17a	DNA/TcMar-Tigger	(1)	653	6	3012503
2441	9.4	0.0	0.3	chr4	159178552	159178858	(31035697)	C	AluSx	SINE/Alu	(6)	306	1	3012537
2550	13.3	0.2	0.2	chr4	159586272	159586669	(30627886)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1234	3013131
6378	15.5	1.1	1.1	chr4	159586654	159587694	(30626861)	C	MSTA-int	LTR/ERVL-MaLR	(589)	1042	2	3013131
877	21.8	14.7	1.1	chr4	159632603	159633000	(30581555)	+	MER67C	LTR/ERV1	147	510	(4)	3013179
1945	17.7	8.9	2.7	chr4	160108226	160108626	(30105929)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3013737
460	21.9	7.8	5.8	chr4	163741964	163742152	(26472403)	+	Charlie7a	DNA/hAT-Charlie	80	272	(0)	3018465
40	8.6	0.0	3.0	chr4	163742319	163742384	(26472171)	+	(TCCC)n	Simple_repeat	1	66	(0)	3018466
49	2.1	0.0	0.0	chr4	163742385	163742433	(26472122)	+	(TCCT)n	Simple_repeat	1	49	(0)	3018467
1704	20.3	0.0	0.3	chr4	163742471	163742756	(26471799)	C	AluJb	SINE/Alu	(6)	306	22	3018468
1410	24.1	5.5	4.9	chr4	165556701	165557083	(24657472)	C	L1ME3D	LINE/L1	(395)	5847	5463	3021281
3327	15.3	3.1	5.4	chr4	165557084	165557710	(24656845)	C	LTR9	LTR/ERV1	(0)	612	1	3021284
1380	18.9	15.6	6.1	chr4	167389444	167389905	(22824650)	+	MER67D	LTR/ERV1	1	514	(0)	3023514
601	12.2	0.0	3.6	chr4	169569275	169569385	(20645170)	C	L1MA4	LINE/L1	(1)	6299	6193	3026496
5601	6.6	2.7	5.1	chr4	169569420	169569433	(20645122)	+	SVA_D	Retroposon/SVA	11	24	(1362)	3026497
55	3.5	0.0	0.0	chr4	169569434	169569492	(20645063)	+	(CTCTCCCT)n	Simple_repeat	1	59	(0)	3026498
6595	7.2	1.7	7.7	chr4	169569493	169571172	(20643383)	+	SVA_D	Retroposon/SVA	25	1364	(23)	3026497
77	17.8	1.8	2.3	chr4	170469540	170469710	(19744845)	+	(CTCC)n	Simple_repeat	1	174	(0)	3027790
1976	24.0	8.6	1.9	chr4	170469786	170470446	(19744109)	C	L1MC4	LINE/L1	(6)	8036	7337	3027791
2019	14.3	6.5	10.6	chr4	170486791	170487243	(19727312)	C	Tigger2a	DNA/TcMar-Tigger	(0)	434	2	3027821
1562	5.7	0.0	0.0	chr4	173583396	173583572	(16630983)	+	AluYc	SINE/Alu	112	288	(11)	3031824
47	4.9	0.0	0.0	chr4	173583674	173583731	(16630824)	+	(TCCC)n	Simple_repeat	1	58	(0)	3031825
66	1.6	0.0	0.0	chr4	173583732	173583794	(16630761)	+	(CCTT)n	Simple_repeat	1	63	(0)	3031826
26	10.9	4.0	0.0	chr4	173583795	173583845	(16630710)	+	(TCCCTT)n	Simple_repeat	1	53	(0)	3031827
1940	11.7	22.8	0.0	chr4	174928146	174928537	(15286018)	C	LTR21C	LTR/ERVL	(0)	511	4	3033584
2075	18.8	5.0	3.5	chr4	174928606	174929057	(15285498)	C	MER67D	LTR/ERV1	(55)	459	1	3033585
18	18.8	4.7	0.0	chr4	175698066	175698108	(14516447)	+	GA-rich	Low_complexity	1	45	(0)	3034514
32	24.3	6.0	0.8	chr4	177124143	177124264	(13090291)	+	(CTCT)n	Simple_repeat	1	128	(0)	3036467
588	24.4	13.9	2.7	chr4	179977174	179977396	(10237159)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	252	3040183
529	21.3	4.9	0.0	chr4	179977744	179977879	(10236676)	C	MLT1D	LTR/ERVL-MaLR	(272)	233	91	3040183
403	23.9	0.0	2.1	chr4	179977895	179977988	(10236567)	C	MLT1D	LTR/ERVL-MaLR	(401)	104	13	3040183
343	29.9	1.7	0.0	chr4	180164947	180165063	(10049492)	C	MIRc	SINE/MIR	(140)	128	10	3040410
15	18.1	2.6	0.0	chr4	180165260	180165299	(10049256)	+	(TTTTA)n	Simple_repeat	1	41	(0)	3040411
1429	30.2	8.2	1.6	chr4	180822872	180823476	(9391079)	C	MLT1J1-int	LTR/ERVL-MaLR	(171)	1216	569	3041281
850	26.5	12.1	1.3	chr4	180823802	180824184	(9390371)	C	MLT1J1-int	LTR/ERVL-MaLR	(797)	590	161	3041281
30	29.3	1.1	0.0	chr4	181060931	181061024	(9153531)	+	(CTCTCT)n	Simple_repeat	1	95	(0)	3041590
31	17.6	2.5	2.4	chr4	184474579	184474658	(5739897)	+	(CCCTCCG)n	Simple_repeat	1	82	(0)	3046627
204	21.4	0.5	0.0	chr4	185731442	185731866	(4482689)	+	(CTCC)n	Simple_repeat	1	427	(0)	3048683
50	0.0	0.0	0.0	chr4	185731867	185731909	(4482646)	+	(TA)n	Simple_repeat	1	43	(0)	3048684
296	7.3	0.0	0.0	chr4	186509115	186509155	(3705400)	C	L1MB7	LINE/L1	(276)	5908	5868	3049772
153	19.5	1.6	0.3	chr4	186509327	186509636	(3704919)	+	GA-rich	Low_complexity	1	315	(0)	3049775
630	33.1	8.8	4.9	chr4	186509648	186510374	(3704181)	C	ERVL-E-int	LTR/ERVL	(110)	5116	4374	3049776
42	10.4	0.0	0.0	chr4	188411558	188411621	(1802934)	+	(GAGA)n	Simple_repeat	1	64	(0)	3052563
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
2287	10.0	3.2	0.0	chr5	393627	393927	(181144332)	C	AluSz	SINE/Alu	(1)	311	1	3055387
31	7.4	0.0	0.0	chr5	1723361	1723403	(179814856)	+	(CTCC)n	Simple_repeat	1	43	(0)	3056582
442	26.5	12.2	0.7	chr5	3275960	3276111	(178262148)	C	LTR16B2	LTR/ERVL	(4)	458	287	3058181
20	19.9	4.3	0.0	chr5	6155960	6156006	(175382253)	+	GA-rich	Low_complexity	1	49	(0)	3061459
1339	24.5	8.3	7.9	chr5	6387685	6388141	(175150118)	C	LTR16B2	LTR/ERVL	(3)	459	1	3061774
350	14.7	0.0	12.8	chr5	6571973	6571990	(174966269)	C	AluJb	SINE/Alu	(168)	134	121	3062043
618	28.7	8.8	6.4	chr5	7853504	7853990	(173684269)	C	LTR16E1	LTR/ERVL	(29)	509	10	3063660
317	25.6	9.0	6.9	chr5	10317200	10317295	(171220964)	C	L1MEg	LINE/L1	(4140)	1944	1839	3066681
101	22.1	1.4	0.0	chr5	10317303	10317514	(171220745)	+	(CT)n	Simple_repeat	1	215	(0)	3066683
1839	14.3	1.6	4.8	chr5	10317515	10317828	(171220431)	C	AluSz	SINE/Alu	(8)	304	1	3066684
1042	24.9	7.0	16.8	chr5	10357723	10357966	(171180293)	C	L2a	LINE/L2	(0)	3426	3173	3066764
629	3.9	0.0	0.0	chr5	10357967	10358044	(171180215)	C	Alu	SINE/Alu	(11)	300	223	3066765
1042	24.9	7.0	16.8	chr5	10358045	10358386	(171179873)	C	L2a	LINE/L2	(0)	3172	2814	3066764
1091	16.9	4.2	0.0	chr5	10358393	10358599	(171179660)	+	MER2	DNA/TcMar-Tigger	1	216	(129)	3066766
34	19.8	2.1	12.7	chr5	14157353	14157591	(167380668)	+	(CTCTT)n	Simple_repeat	1	244	(0)	3071873
1803	17.6	1.7	1.0	chr5	14157592	14157887	(167380372)	C	AluJb	SINE/Alu	(14)	298	1	3071874
1835	16.6	11.4	4.9	chr5	14820353	14820783	(166717476)	C	MER31B	LTR/ERV1	(3)	463	1	3072702
16	0.0	0.0	0.0	chr5	16897303	16897319	(164640940)	+	(A)n	Simple_repeat	1	17	(0)	3075732
737	19.9	2.7	0.0	chr5	17097439	17097584	(164440675)	+	MER3	DNA/hAT-Charlie	17	166	(43)	3076202
247	29.1	0.2	1.4	chr5	17820669	17820737	(163717522)	+	MLT1E1A	LTR/ERVL-MaLR	86	189	(360)	3077270
25	24.5	0.0	0.0	chr5	17820787	17820847	(163717412)	+	GA-rich	Low_complexity	1	61	(0)	3077271
1177	24.6	5.3	4.8	chr5	17820850	17821186	(163717073)	+	MLT1E1A	LTR/ERVL-MaLR	273	611	(69)	3077270
388	27.1	1.1	0.3	chr5	22308491	22308614	(159229645)	+	L1MB7	LINE/L1	6018	6141	(37)	3083255
635	20.6	6.2	0.0	chr5	22308650	22308785	(159229474)	C	MLT1D	LTR/ERVL-MaLR	(360)	145	1	3083256
42	4.0	0.0	0.0	chr5	22308804	22308854	(159229405)	+	(AC)n	Simple_repeat	1	51	(0)	3083257
101	3.0	4.4	0.0	chr5	22308854	22308988	(159229271)	+	(AG)n	Simple_repeat	1	141	(0)	3083258
25	16.4	0.0	0.0	chr5	24579343	24579390	(156958869)	+	(ATAT)n	Simple_repeat	1	48	(0)	3086259
350	34.9	2.9	4.0	chr5	24579391	24579566	(156958693)	+	L2a	LINE/L2	1814	1987	(1432)	3086260
251	25.5	3.1	4.1	chr5	24579581	24579678	(156958581)	+	L2-3_Crp	LINE/L2	803	899	(1197)	3086261
319	30.9	20.9	3.9	chr5	24579683	24580119	(156958140)	+	L2a	LINE/L2	2106	2636	(783)	3086260
102	21.6	5.2	3.9	chr5	28017183	28017502	(153520757)	+	GA-rich	Low_complexity	1	323	(0)	3090627
220	30.9	3.0	5.8	chr5	28017507	28017609	(153520650)	+	L2a	LINE/L2	2500	2599	(820)	3090628
38	5.0	0.0	0.0	chr5	31200557	31200598	(150337661)	+	(CA)n	Simple_repeat	1	42	(0)	3094581
44	16.8	0.0	3.2	chr5	31200656	31200749	(150337510)	+	GA-rich	Low_complexity	1	94	(0)	3094582
386	27.7	1.8	0.9	chr5	31200886	31200998	(150337261)	C	MIR3	SINE/MIR	(5)	203	90	3094583
1358	18.9	9.3	10.4	chr5	33490666	33490979	(148047280)	+	MER92B	LTR/ERV1	153	481	(155)	3098440
1626	15.5	2.2	4.6	chr5	33490980	33491263	(148046996)	C	AluJr	SINE/Alu	(35)	277	1	3098443
1358	18.9	9.3	10.4	chr5	33491264	33491438	(148046821)	+	MER92B	LTR/ERV1	482	636	(0)	3098440
1581	15.7	4.0	5.7	chr5	34182319	34182469	(147355790)	+	AluJo	SINE/Alu	126	275	(37)	3099474
53	0.0	2.0	0.0	chr5	34182475	34182525	(147355734)	+	(AAAT)n	Simple_repeat	1	52	(0)	3099476
1925	12.6	3.9	0.4	chr5	35664409	35664678	(145873581)	+	AluSg	SINE/Alu	1	280	(30)	3101720
75	34.2	2.2	1.9	chr5	35664679	35664849	(145873410)	+	A-rich	Low_complexity	145	312	(0)	3101721
567	29.9	9.3	2.0	chr5	35665030	35665278	(145872981)	C	MIR	SINE/MIR	(0)	262	3	3101722
34	15.2	0.0	2.9	chr5	35665416	35665485	(145872774)	+	GA-rich	Low_complexity	1	70	(0)	3101723
165	11.6	4.0	6.4	chr5	37497130	37497550	(144040709)	+	(CTTCC)n	Simple_repeat	1	438	(0)	3104649
31	23.1	3.0	2.9	chr5	37876034	37876079	(143662180)	+	(CTTT)n	Simple_repeat	1	47	(0)	3105176
41	4.5	0.0	0.0	chr5	37876080	37876126	(143662133)	+	(CCTC)n	Simple_repeat	1	47	(0)	3105177
31	23.1	3.0	2.9	chr5	37876127	37876179	(143662080)	+	(CTTT)n	Simple_repeat	4	56	(0)	3105178
2757	22.0	3.1	0.5	chr5	37876204	37876775	(143661484)	+	MLT1E1A	LTR/ERVL-MaLR	80	666	(14)	3105179
130	2.4	6.4	0.6	chr5	38832047	38832217	(142706042)	+	(CT)n	Simple_repeat	1	182	(0)	3106749
399	23.7	1.5	6.9	chr5	38832416	38832560	(142705699)	C	L1M5	LINE/L1	(567)	5557	5421	3106750
122	13.9	0.5	1.0	chr5	41312529	41312736	(140225523)	+	(TTCC)n	Simple_repeat	1	209	(0)	3110264
2891	10.7	4.3	0.0	chr5	42447150	42447598	(139090661)	C	L1PB1	LINE/L1	(0)	6920	6452	3111630
23	20.2	2.9	1.4	chr5	42447606	42447676	(139090583)	+	(TCTT)n	Simple_repeat	1	72	(0)	3111631
36	6.7	0.0	0.0	chr5	42447677	42447723	(139090536)	+	(CTCC)n	Simple_repeat	1	47	(0)	3111632
34	2.2	0.0	7.4	chr5	42447730	42447783	(139090476)	+	(TCTT)n	Simple_repeat	1	54	(0)	3111633
1743	14.8	3.3	2.6	chr5	42447791	42448060	(139090199)	C	AluSx1	SINE/Alu	(39)	273	2	3111634
1019	23.5	4.2	0.4	chr5	42733582	42733812	(138804447)	C	LTR16A	LTR/ERVL	(24)	427	188	3111994
345	30.4	1.0	1.0	chr5	42733830	42733932	(138804327)	+	L1ME3Cz	LINE/L1	302	404	(593)	3111995
258	29.2	2.8	5.4	chr5	42733936	42733948	(138804311)	+	L1M5	LINE/L1	5725	5735	(459)	3111996
992	19.0	10.8	16.6	chr5	42733949	42734365	(138803894)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	3111997
258	29.2	2.8	5.4	chr5	42734366	42734463	(138803796)	+	L1M5	LINE/L1	5736	5833	(361)	3111996
745	10.1	0.0	1.0	chr5	43123981	43124079	(138414180)	+	FLAM_A	SINE/Alu	4	101	(41)	3112578
28	0.0	0.0	0.0	chr5	43124086	43124112	(138414147)	+	(TCTTT)n	Simple_repeat	1	27	(0)	3112579
206	23.3	10.4	0.0	chr5	43124142	43124201	(138414058)	C	MIRc	SINE/MIR	(125)	143	77	3112580
14	12.1	3.6	0.0	chr5	44388503	44388530	(137149729)	+	GA-rich	Low_complexity	1	29	(0)	3114208
14	0.0	0.0	0.0	chr5	44388613	44388630	(137149629)	+	(AGC)n	Simple_repeat	1	18	(0)	3114209
13	13.1	0.0	0.0	chr5	44388951	44388975	(137149284)	+	(TGG)n	Simple_repeat	1	25	(0)	3114210
5852	17.2	2.7	1.1	chr5	44956460	44958563	(136579696)	C	L1MA7	LINE/L1	(0)	6291	4148	3114939
42	0.0	0.0	0.0	chr5	44958570	44958607	(136579652)	+	(CTG)n	Simple_repeat	1	38	(0)	3114940
75	22.6	1.3	4.3	chr5	44958608	44958827	(136579432)	+	(CTT)n	Simple_repeat	2	213	(0)	3114941
277	0.0	0.0	15.9	chr5	51055309	51055352	(130482907)	C	L1PA8	LINE/L1	(10)	6162	6110	3117279
877	6.5	0.0	0.0	chr5	51055353	51055459	(130482800)	C	U6	snRNA	(0)	107	1	3117280
632	28.6	8.6	5.9	chr5	51055643	51055947	(130482312)	C	L2a	LINE/L2	(8)	3418	3105	3117281
12	14.6	0.0	5.9	chr5	55308084	55308117	(126230142)	+	A-rich	Low_complexity	1	34	(0)	3123045
525	24.5	6.2	0.7	chr5	55308554	55308705	(126229554)	+	MIRb	SINE/MIR	100	260	(8)	3123046
1703	24.2	3.4	5.4	chr5	55314258	55314715	(126223544)	+	MLT1D	LTR/ERVL-MaLR	1	448	(57)	3123054
47	11.1	3.8	0.0	chr5	56359474	56359552	(125178707)	+	(AG)n	Simple_repeat	1	82	(0)	3124925
22	21.4	3.2	6.2	chr5	56359553	56359564	(125178695)	+	GA-rich	Low_complexity	4	97	(0)	3124926
27	5.2	5.0	0.0	chr5	60660139	60660178	(120878081)	+	(GA)n	Simple_repeat	1	42	(0)	3131137
9075	7.4	0.6	2.7	chr5	60660180	60661518	(120876741)	+	HERV17-int	LTR/ERV1	704	2014	(6612)	3131136
250	17.0	4.8	0.8	chr5	61731271	61731834	(119806425)	+	GA-rich	Low_complexity	1	591	(0)	3132721
2189	19.7	3.5	2.3	chr5	61750713	61751139	(119787120)	C	Tigger2a	DNA/TcMar-Tigger	(0)	434	3	3132750
1569	29.4	5.3	4.6	chr5	61751140	61751224	(119787035)	+	ERV3-16A3_I-int	LTR/ERVL	5085	5162	(64)	3132749
1661	24.4	2.8	2.0	chr5	61751350	61751743	(119786516)	+	LTR16	LTR/ERVL	37	433	(5)	3132751
42	4.7	0.0	0.0	chr5	62139181	62139225	(119399034)	+	(AC)n	Simple_repeat	1	45	(0)	3133248
308	23.9	9.4	13.3	chr5	62139230	62139605	(119398654)	C	L1ME4b	LINE/L1	(210)	682	323	3133249
2714	18.0	3.0	0.4	chr5	62709482	62709961	(118828298)	C	MER34A1	LTR/ERV1	(0)	587	95	3134257
104	15.8	1.1	0.0	chr5	62709968	62710151	(118828108)	+	(TCCC)n	Simple_repeat	1	186	(0)	3134258
1631	15.9	0.8	0.4	chr5	62710191	62710435	(118827824)	C	AluJb	SINE/Alu	(51)	261	16	3134259
2416	21.1	4.1	3.4	chr5	63055316	63055900	(118482359)	+	MER92B	LTR/ERV1	1	589	(47)	3134695
4040	14.0	3.6	1.0	chr5	63055915	63056616	(118481643)	C	L1MB2	LINE/L1	(2)	6169	5449	3134696
45	25.6	0.0	0.0	chr5	64383971	64384077	(117154182)	+	G-rich	Low_complexity	1	107	(0)	3136379
36	30.4	1.5	2.2	chr5	64384078	64384101	(117154158)	+	GA-rich	Low_complexity	3	135	(0)	3136380
1201	26.6	4.1	1.2	chr5	64384171	64384501	(117153758)	+	L1ME1	LINE/L1	21	361	(6186)	3136381
20	20.9	5.3	2.5	chr5	65925814	65925888	(115612371)	+	(CCCT)n	Simple_repeat	1	79	(0)	3138688
713	22.1	10.8	1.7	chr5	66572758	66573102	(114965157)	+	HAL1ME	LINE/L1	1332	1711	(754)	3139630
96	18.0	2.4	4.6	chr5	66573290	66573544	(114964715)	+	GA-rich	Low_complexity	1	261	(0)	3139631
337	26.9	4.4	5.3	chr5	66573547	66573660	(114964599)	+	LFSINE_Vert	SINE/tRNA	55	167	(292)	3139632
395	27.1	3.0	5.8	chr5	66748164	66748300	(114789959)	+	L2a	LINE/L2	3294	3426	(0)	3139885
52	15.6	1.0	1.0	chr5	66748380	66748477	(114789782)	+	(CCTT)n	Simple_repeat	1	99	(0)	3139886
2355	11.3	0.0	0.3	chr5	66748478	66748786	(114789473)	C	AluSc	SINE/Alu	(0)	309	2	3139887
1096	26.8	10.3	13.1	chr5	68520660	68521275	(113016984)	C	MLT1G3	LTR/ERVL-MaLR	(12)	583	1	3142383
1684	17.0	1.1	0.4	chr5	68807654	68807924	(112730335)	+	AluSz	SINE/Alu	1	273	(39)	3142752
174	17.3	2.9	3.1	chr5	68807934	68808345	(112729914)	+	GA-rich	Low_complexity	1	424	(0)	3142753
1195	11.5	2.9	1.0	chr5	68808356	68808557	(112729702)	+	L1PB2	LINE/L1	5944	6149	(2)	3142754
268	31.8	2.3	3.0	chr5	68808562	68808694	(112729565)	C	MER20B	DNA/hAT-Charlie	(588)	195	64	3142751
2249	8.0	1.4	0.0	chr5	69092093	69092380	(112445879)	C	AluSp	SINE/Alu	(17)	296	5	3143231
1098	5.5	2.7	1.4	chr5	69092381	69092527	(112445732)	+	MER41B	LTR/ERV1	486	634	(0)	3143230
1321	17.9	1.3	1.3	chr5	69092819	69093042	(112445217)	C	AluJb	SINE/Alu	(0)	312	89	3143232
13	24.0	2.2	2.1	chr5	72848148	72848193	(108690066)	+	(CGG)n	Simple_repeat	1	47	(0)	3149599
2463	5.5	0.0	0.7	chr5	73464922	73465214	(108073045)	+	AluY	SINE/Alu	1	291	(20)	3150518
42	13.0	0.0	0.0	chr5	73465215	73465283	(108072976)	+	(GAGG)n	Simple_repeat	1	69	(0)	3150519
349	35.7	10.8	1.9	chr5	74225316	74225678	(107312581)	C	L1ME4c	LINE/L1	(1343)	4803	4405	3151661
135	19.6	1.5	3.6	chr5	74225680	74226011	(107312248)	+	(TCCT)n	Simple_repeat	1	337	(0)	3151663
1004	25.9	12.1	9.0	chr5	74674634	74674830	(106863429)	C	LTR24B	LTR/ERV1	(430)	205	1	3152334
2256	14.7	7.9	6.5	chr5	74674981	74675439	(106862820)	C	MER31B	LTR/ERV1	(0)	466	1	3152336
1036	29.4	3.3	3.3	chr5	77144121	77144518	(104393741)	+	L3	LINE/CR1	3529	3926	(173)	3156264
21122	9.4	2.6	0.8	chr5	78382820	78388024	(103150235)	C	L1PB1	LINE/L1	(359)	6508	1189	3158053
1024	14.2	1.6	0.5	chr5	78388025	78388215	(103150044)	C	L1PB1	LINE/L1	(6670)	193	1	3158053
10375	4.5	0.9	2.8	chr5	78390652	78392063	(103146196)	C	SVA_D	Retroposon/SVA	(0)	1386	2	3158060
18	19.0	2.7	0.0	chr5	78392069	78392105	(103146154)	+	GA-rich	Low_complexity	1	38	(0)	3158061
287	31.1	18.7	0.5	chr5	78392204	78392410	(103145849)	C	MIR	SINE/MIR	(14)	248	4	3158062
54	22.9	1.4	2.0	chr5	79134001	79134145	(102404114)	+	GA-rich	Low_complexity	1	147	(0)	3159133
5479	13.5	3.8	2.7	chr5	79391872	79392848	(102145411)	+	Tigger3b	DNA/TcMar-Tigger	1	989	(242)	3159660
390	9.9	0.0	7.8	chr5	79392850	79392926	(102145333)	+	Tigger3c	DNA/TcMar-Tigger	329	399	(203)	3159661
43	0.0	2.5	0.0	chr5	79392955	79392994	(102145265)	+	(GA)n	Simple_repeat	1	41	(0)	3159662
641	17.3	2.3	0.8	chr5	79392996	79393123	(102145136)	+	L1MC4	LINE/L1	7913	8042	(0)	3159663
324	32.0	9.9	2.0	chr5	79938548	79938876	(101599383)	C	MLT1H	LTR/ERVL-MaLR	(18)	531	69	3160582
2371	9.9	3.0	0.0	chr5	79938937	79939230	(101599029)	C	AluSp	SINE/Alu	(10)	303	1	3160583
1680	16.1	0.0	4.7	chr5	80227946	80228224	(101310035)	+	AluJb	SINE/Alu	7	272	(40)	3161110
62	9.9	0.9	2.8	chr5	80228226	80228331	(101309928)	+	(GAGG)n	Simple_repeat	1	107	(0)	3161111
1349	18.6	10.8	1.9	chr5	80228460	80228728	(101309531)	C	AluJr	SINE/Alu	(16)	296	1	3161112
281	31.7	5.7	3.7	chr5	80885401	80885590	(100652669)	C	MLT1N2	LTR/ERVL-MaLR	(13)	549	356	3162350
855	22.8	4.7	0.0	chr5	80886095	80886278	(100651981)	+	MER58A	DNA/hAT-Charlie	1	193	(31)	3162351
41	13.8	3.2	3.1	chr5	81751267	81751359	(99786900)	+	(CCTC)n	Simple_repeat	1	96	(0)	3163565
739	31.6	10.3	1.8	chr5	84290013	84290411	(97247848)	+	LTR16	LTR/ERVL	1	437	(1)	3167047
322	12.2	0.0	0.0	chr5	84290465	84290513	(97247746)	+	MER34	LTR/ERV1	2	50	(537)	3167048
680	26.1	7.0	1.5	chr5	84290557	84290896	(97247363)	+	MER34	LTR/ERV1	158	570	(1)	3167048
57	27.0	1.7	2.2	chr5	87141038	87141216	(94397043)	+	GA-rich	Low_complexity	1	182	(0)	3170690
78	6.6	2.6	0.9	chr5	88029162	88029274	(93508985)	+	(TC)n	Simple_repeat	1	116	(0)	3171802
2141	21.0	4.9	10.0	chr5	88362086	88362578	(93175681)	C	MER92B	LTR/ERV1	(0)	636	133	3172218
400	34.6	3.6	0.0	chr5	88378258	88378416	(93159843)	C	MLT1N2	LTR/ERVL-MaLR	(8)	554	390	3172246
25	28.3	1.2	1.2	chr5	88378512	88378595	(93159664)	+	GA-rich	Low_complexity	1	85	(0)	3172247
356	27.9	3.1	3.1	chr5	88378619	88378714	(93159545)	C	MLT1N2	LTR/ERVL-MaLR	(341)	221	126	3172246
46	0.0	0.0	0.0	chr5	88684765	88684803	(92853456)	+	(TC)n	Simple_repeat	1	39	(0)	3172665
180	21.6	1.9	3.8	chr5	90231642	90231694	(91306565)	C	OldhAT1	DNA/hAT-Ac	(415)	2433	2382	3174483
37	29.8	0.8	1.6	chr5	90231733	90231855	(91306404)	+	GA-rich	Low_complexity	1	124	(0)	3174484
747	30.8	5.0	3.1	chr5	90232001	90232355	(91305904)	C	L2a	LINE/L2	(10)	3416	3055	3174485
12	20.6	2.4	2.4	chr5	90292011	90292051	(91246208)	+	A-rich	Low_complexity	1	42	(0)	3174565
373	39.6	2.9	5.0	chr5	90344529	90344760	(91193499)	C	L2b	LINE/L2	(625)	2794	2578	3174625
374	27.7	0.9	0.9	chr5	90344786	90344898	(91193361)	C	L2b	LINE/L2	(1017)	2402	2290	3174625
408	34.7	9.3	5.6	chr5	90344938	90345331	(91192928)	C	L2	LINE/L2	(619)	2800	2391	3174629
181	24.3	6.4	7.2	chr5	90563439	90563549	(90974710)	+	X7A_LINE	LINE/CR1	68	177	(90)	3174970
19	17.6	4.2	5.4	chr5	91383382	91383387	(90154872)	+	(GCGCC)n	Simple_repeat	1	24	(50)	3176169
12	24.6	3.6	3.5	chr5	91383388	91383443	(90154816)	+	(GCC)n	Simple_repeat	1	58	(0)	3176170
19	17.6	4.2	5.4	chr5	91383444	91383452	(90154807)	+	(GCGCC)n	Simple_repeat	25	74	(0)	3176169
12	31.9	0.0	0.0	chr5	91383758	91383804	(90154455)	+	G-rich	Low_complexity	1	47	(0)	3176171
2306	29.6	7.6	3.1	chr5	93286374	93288192	(88250067)	+	L1MCc	LINE/L1	655	2729	(4308)	3178485
248	8.6	3.6	0.2	chr5	93581669	93582088	(87956171)	+	(TC)n	Simple_repeat	1	435	(0)	3178828
17	15.2	4.3	2.1	chr5	93582091	93582136	(87956123)	+	(CCTCTC)n	Simple_repeat	1	48	(0)	3178829
75	3.5	8.6	0.0	chr5	93583272	93583388	(87954871)	+	(TC)n	Simple_repeat	1	127	(0)	3178832
21	26.9	3.3	3.2	chr5	93583396	93583486	(87954773)	+	(TCT)n	Simple_repeat	1	94	(0)	3178833
17	0.0	0.0	0.0	chr5	93583536	93583556	(87954703)	+	(AGG)n	Simple_repeat	1	21	(0)	3178834
19	13.0	2.2	4.3	chr5	93583715	93583760	(87954499)	+	GA-rich	Low_complexity	1	47	(0)	3178835
1500	28.1	12.2	2.1	chr5	94978965	94979491	(86558768)	+	MLT1J1-int	LTR/ERVL-MaLR	793	1380	(7)	3180514
658	27.9	9.2	4.4	chr5	94979531	94979890	(86558369)	+	MLT1J1	LTR/ERVL-MaLR	66	444	(0)	3180514
304	24.0	2.6	0.0	chr5	95207681	95207755	(86330504)	+	L2a	LINE/L2	3350	3426	(0)	3180824
98	4.8	0.0	0.0	chr5	95207929	95208037	(86330222)	+	(GAGAGAGAGG)n	Simple_repeat	1	109	(0)	3180825
13	0.0	0.0	0.0	chr5	95208087	95208103	(86330156)	+	(TGT)n	Simple_repeat	1	17	(0)	3180826
2165	11.8	0.0	0.3	chr5	95208104	95208390	(86329869)	C	AluSq2	SINE/Alu	(27)	286	1	3180827
2445	28.8	6.8	15.6	chr5	95382558	95383279	(86154980)	C	L2a	LINE/L2	(1495)	1924	1179	3181080
491	30.6	2.4	0.0	chr5	95456140	95456299	(86081960)	C	L2c	LINE/L2	(939)	2480	2317	3181187
287	24.6	0.0	0.0	chr5	95680320	95680380	(85857879)	C	Tigger15a	DNA/TcMar-Tigger	(22)	693	633	3181508
13	8.5	4.0	0.0	chr5	95680522	95680546	(85857713)	+	(TTCTC)n	Simple_repeat	1	26	(0)	3181509
459	33.5	12.2	6.0	chr5	95680708	95681671	(85856588)	+	L2c	LINE/L2	2322	3376	(11)	3181510
43	18.1	0.0	0.8	chr5	96420733	96420820	(85117439)	+	GA-rich	Low_complexity	1	87	(0)	3182540
427	30.3	8.4	6.2	chr5	97182183	97182655	(84355604)	+	L2b	LINE/L2	2814	3289	(98)	3183679
59	13.2	2.7	0.9	chr5	99835035	99835145	(81703114)	+	GA-rich	Low_complexity	1	114	(0)	3186970
292	23.2	1.2	1.2	chr5	100225958	100226040	(81312219)	C	MER67D	LTR/ERV1	(1)	513	431	3187457
637	26.6	1.7	3.5	chr5	100226012	100226276	(81311983)	C	MER31B	LTR/ERV1	(76)	390	20	3187458
594	31.0	5.8	1.5	chr5	100677888	100678149	(80860110)	C	MLT1K	LTR/ERVL-MaLR	(1)	594	321	3188069
84	7.9	1.6	0.0	chr5	100678204	100678325	(80859934)	+	(GAGA)n	Simple_repeat	1	124	(0)	3188070
281	32.2	4.2	0.0	chr5	100678409	100678498	(80859761)	C	MLT1K	LTR/ERVL-MaLR	(375)	220	127	3188069
126	19.1	1.9	1.1	chr5	103490478	103490748	(78047511)	+	(CCTC)n	Simple_repeat	1	276	(0)	3191534
1126	30.2	7.2	4.5	chr5	103490750	103491234	(78047025)	C	L1ME5	LINE/L1	(292)	5902	5404	3191535
10413	12.6	2.6	0.4	chr5	105460261	105461856	(76076403)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3193898
50	17.9	1.7	2.5	chr5	106377135	106377250	(75161009)	+	(TTCC)n	Simple_repeat	1	118	(0)	3195058
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
14	9.3	0.0	0.0	chr5	107672098	107672120	(73866139)	+	(GCA)n	Simple_repeat	1	23	(0)	3196632
21	0.0	0.0	0.0	chr5	107672507	107672529	(73865730)	+	(T)n	Simple_repeat	1	23	(0)	3196633
3049	15.8	5.9	4.1	chr5	108746878	108747564	(72790695)	C	MER67C	LTR/ERV1	(0)	711	12	3198086
19513	13.6	2.3	1.6	chr5	110300633	110306557	(71231702)	C	L1MA1	LINE/L1	(0)	7721	1767	3200075
63	0.0	9.0	0.0	chr5	110306558	110306635	(71231624)	+	(TC)n	Simple_repeat	1	85	(0)	3200076
19513	17.1	4.1	0.9	chr5	110306636	110308318	(71229941)	C	L1MA1	LINE/L1	(5799)	1766	12	3200075
1065	26.9	2.0	1.6	chr5	110620400	110620577	(70917682)	+	MER90a	LTR/ERV1	361	540	(74)	3200438
112	0.9	3.5	0.0	chr5	110620578	110620691	(70917568)	+	(TC)n	Simple_repeat	1	118	(0)	3200439
1065	26.9	2.0	1.6	chr5	110620692	110620765	(70917494)	+	MER90a	LTR/ERV1	541	614	(0)	3200438
2331	11.5	0.0	0.0	chr5	110620859	110621162	(70917097)	C	AluSx1	SINE/Alu	(8)	304	1	3200440
20	25.9	5.6	1.1	chr5	111224137	111224183	(70314076)	+	G-rich	Low_complexity	1	91	(0)	3201161
13	15.8	2.6	5.0	chr5	111224184	111224222	(70314037)	+	GA-rich	Low_complexity	1	40	(0)	3201162
24	15.1	0.0	5.3	chr5	111224406	111224462	(70313797)	+	(GGC)n	Simple_repeat	1	57	(0)	3201163
72	1.5	0.0	0.0	chr5	111531937	111532002	(70006257)	+	(CT)n	Simple_repeat	1	66	(0)	3201567
1599	19.0	9.0	13.8	chr5	111534923	111535460	(70002799)	C	MER67D	LTR/ERV1	(0)	514	5	3201576
28	15.6	4.2	4.7	chr5	111757232	111757305	(69780954)	+	G-rich	Low_complexity	1	73	(0)	3201825
24	34.9	0.0	0.0	chr5	111757369	111757454	(69780805)	+	(TC)n	Simple_repeat	1	86	(0)	3201826
18	27.9	0.0	2.9	chr5	111757614	111757681	(69780578)	+	(CGCACCC)n	Simple_repeat	1	68	(0)	3201827
702	27.4	14.9	1.3	chr5	112240022	112240413	(69297846)	+	L2	LINE/L2	2023	2477	(942)	3202504
46401	5.2	1.2	0.1	chr5	112444459	112450410	(69087849)	+	HERV17-int	LTR/ERV1	1	6017	(2609)	3202771
570	31.2	1.7	0.6	chr5	112593907	112594080	(68944179)	+	MIR3	SINE/MIR	16	191	(17)	3202961
1352	17.9	10.0	3.2	chr5	115086233	115086484	(66451775)	+	AluJb	SINE/Alu	4	274	(38)	3206275
56	6.4	0.0	4.4	chr5	115086486	115086576	(66451683)	+	(GGAG)n	Simple_repeat	1	91	(0)	3206276
1500	33.8	7.5	4.3	chr5	115086578	115087101	(66451158)	+	ERVL-E-int	LTR/ERVL	4168	4698	(969)	3206273
12	20.0	5.0	0.0	chr5	115262801	115262840	(66275419)	+	(CCGCTCA)n	Simple_repeat	1	42	(0)	3206534
669	23.2	5.3	4.0	chr5	116157762	116157985	(65380274)	C	L1M5	LINE/L1	(589)	5573	5347	3207780
310	25.9	7.7	0.0	chr5	116157991	116158098	(65380161)	C	L1MEg	LINE/L1	(5881)	203	87	3207781
685	25.2	0.0	0.0	chr5	116158509	116158639	(65379620)	C	AluJr	SINE/Alu	(44)	268	138	3207782
255	10.8	0.0	0.0	chr5	116327391	116327427	(65210832)	+	L1MEc	LINE/L1	531	567	(5941)	3207987
941	27.0	7.2	10.3	chr5	116327420	116327571	(65210688)	+	L1MEc	LINE/L1	1728	1835	(4582)	3207987
47	4.3	0.0	0.0	chr5	116327572	116327620	(65210639)	+	(CT)n	Simple_repeat	1	49	(0)	3207988
1107	25.4	8.2	2.5	chr5	116327621	116328128	(65210131)	+	L1MEc	LINE/L1	1836	2368	(4034)	3207987
42	0.0	0.0	0.0	chr5	117096554	117096589	(64441670)	+	(AC)n	Simple_repeat	1	36	(0)	3209153
442	27.3	1.5	11.0	chr5	117096590	117096767	(64441492)	C	MLT2C1	LTR/ERVL	(40)	357	201	3209152
268	40.5	7.5	1.9	chr5	117096788	117097162	(64441097)	+	L1MEd	LINE/L1	282	679	(6424)	3209154
3808	9.6	7.2	0.0	chr5	118466115	118466695	(63071564)	C	L1PA13	LINE/L1	(19)	6144	5519	3210872
10996	11.4	1.6	0.9	chr5	119135881	119137493	(62400766)	+	THE1D-int	LTR/ERVL-MaLR	1	1625	(6)	3211902
1842	13.9	0.3	3.7	chr5	121704753	121705046	(59833213)	+	AluSg7	SINE/Alu	2	285	(24)	3215032
335	16.2	0.2	0.0	chr5	121705047	121705612	(59832647)	+	GA-rich	Low_complexity	1	567	(0)	3215033
266	23.7	4.9	3.0	chr5	121705644	121705743	(59832516)	C	L2a	LINE/L2	(120)	3306	3205	3215031
1370	32.0	7.8	3.2	chr5	121705731	121706440	(59831819)	C	L2a	LINE/L2	(580)	2839	2095	3215031
31	27.1	5.7	1.5	chr5	122466962	122467085	(59071174)	+	(TC)n	Simple_repeat	1	131	(0)	3215931
410	21.3	3.9	0.8	chr5	122467439	122467561	(59070698)	+	MER5B	DNA/hAT-Charlie	1	127	(51)	3215932
36	13.0	1.4	2.7	chr5	122467565	122467636	(59070623)	+	GA-rich	Low_complexity	1	73	(0)	3215933
622	32.5	8.2	2.8	chr5	122730443	122730835	(58807424)	C	MLT1K	LTR/ERVL-MaLR	(6)	589	174	3216323
5218	17.0	2.2	1.7	chr5	123963987	123964368	(57573891)	C	L1MC1	LINE/L1	(665)	5668	5286	3218049
84	19.5	1.2	0.0	chr5	123964383	123964552	(57573707)	+	(CTCT)n	Simple_repeat	1	172	(0)	3218051
1045	14.6	0.0	0.0	chr5	123964575	123964718	(57573541)	C	AluJb	SINE/Alu	(82)	230	87	3218052
1782	20.1	3.9	10.0	chr5	124440333	124440830	(57097429)	C	MER31B	LTR/ERV1	(0)	466	1	3218655
16	4.0	3.9	0.0	chr5	125198998	125199023	(56339236)	+	(AAAG)n	Simple_repeat	1	27	(0)	3219746
1057	15.6	4.8	4.0	chr5	127708901	127709127	(53829132)	C	MSTA	LTR/ERVL-MaLR	(0)	428	200	3223194
13	11.2	6.7	0.0	chr5	127709128	127709157	(53829102)	+	GA-rich	Low_complexity	1	32	(0)	3223195
1316	16.9	2.9	5.4	chr5	127709158	127709456	(53828803)	C	MSTA	LTR/ERVL-MaLR	(158)	307	1	3223196
3091	23.4	3.9	2.6	chr5	129044299	129046156	(52492103)	+	L1M4c	LINE/L1	1277	3276	(3362)	3224874
2228	23.3	0.9	8.8	chr5	129046158	129046759	(52491500)	C	MLT2B3	LTR/ERVL	(0)	554	1	3224876
569	31.6	4.7	4.0	chr5	130678134	130678680	(50859579)	+	L1MC4	LINE/L1	3432	4006	(2208)	3226835
20	14.0	0.0	0.0	chr5	130678761	130678792	(50859467)	+	(CA)n	Simple_repeat	1	32	(0)	3226836
65	18.2	1.5	0.8	chr5	130678906	130679037	(50859222)	+	G-rich	Low_complexity	1	134	(0)	3226837
26	23.8	5.8	0.0	chr5	130679059	130679145	(50859114)	+	(GATAGA)n	Simple_repeat	1	92	(0)	3226838
318	36.0	9.6	2.1	chr5	130679150	130679580	(50858679)	+	L1MC4	LINE/L1	4083	4549	(1665)	3226835
18	19.8	2.2	0.0	chr5	134526091	134526136	(47012123)	+	(CTCT)n	Simple_repeat	1	47	(0)	3232769
1160	26.0	7.4	5.5	chr5	135426611	135427049	(46111210)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	1	3234273
640	31.1	15.0	0.8	chr5	137587102	137587597	(43950662)	C	L2c	LINE/L2	(559)	2860	2282	3237177
78	18.9	1.0	5.3	chr5	138837409	138837614	(42700645)	+	(TCC)n	Simple_repeat	1	208	(0)	3239701
1830	18.4	0.0	1.0	chr5	138837615	138837923	(42700336)	C	AluJb	SINE/Alu	(6)	306	1	3239702
24	17.4	7.6	1.2	chr5	140042801	140042879	(41495380)	+	(GCGGCT)n	Simple_repeat	1	85	(0)	3241897
64	5.7	2.1	2.1	chr5	140042904	140042998	(41495261)	+	(TGC)n	Simple_repeat	1	97	(0)	3241898
17	13.7	0.0	0.0	chr5	140043211	140043266	(41494993)	+	(GCAGC)n	Simple_repeat	1	56	(0)	3241899
1845	25.6	5.7	1.6	chr5	140090454	140091218	(41447041)	C	L2a	LINE/L2	(0)	3426	2638	3242011
571	32.6	7.3	3.6	chr5	140091280	140091782	(41446477)	C	HAL1	LINE/L1	(1832)	675	153	3242012
19	18.9	0.0	0.0	chr5	140108723	140108758	(41429501)	+	A-rich	Low_complexity	1	36	(0)	3242042
14	27.4	0.0	1.9	chr5	140113737	140113752	(41424507)	+	(CAGCAG)n	Simple_repeat	1	15	(0)	3242043
29	0.0	0.0	0.0	chr5	140113753	140113779	(41424480)	+	(GGT)n	Simple_repeat	1	27	(0)	3242044
14	27.4	0.0	1.9	chr5	140113780	140113815	(41424444)	+	(CAGCAG)n	Simple_repeat	4	39	(0)	3242045
25	26.6	2.1	2.1	chr5	140113868	140113960	(41424299)	+	G-rich	Low_complexity	1	95	(0)	3242046
61	27.6	3.0	3.6	chr5	140114062	140114330	(41423929)	+	(GGC)n	Simple_repeat	1	277	(0)	3242047
2158	10.7	0.3	1.3	chr5	141677951	141678250	(39860009)	C	AluSx1	SINE/Alu	(15)	297	1	3244390
1294	25.6	7.5	7.5	chr5	141678254	141678559	(39859700)	+	L2a	LINE/L2	2917	3196	(230)	3244384
614	18.6	1.9	17.5	chr5	142081697	142081767	(39456492)	+	Arthur1A	DNA/hAT-Tip100	105	174	(3)	3245206
199	36.7	3.0	1.5	chr5	142081825	142081954	(39456305)	+	L2a	LINE/L2	2998	3129	(246)	3245208
523	28.2	7.6	3.2	chr5	142081955	142082177	(39456082)	C	MER67B	LTR/ERV1	(0)	543	282	3245209
1563	20.8	6.9	3.6	chr5	142082147	142082650	(39455609)	C	MER67B	LTR/ERV1	(290)	421	1	3245209
2164	11.4	1.0	0.7	chr5	142387829	142388127	(39150132)	C	AluSx4	SINE/Alu	(10)	300	1	3245884
565	26.9	8.6	7.8	chr5	142388128	142388251	(39150008)	C	L2a	LINE/L2	(42)	3384	3246	3245883
1581	16.9	15.9	3.5	chr5	142388252	142388318	(39149941)	C	MER31B	LTR/ERV1	(0)	466	389	3245885
2224	10.5	1.3	1.3	chr5	142388319	142388622	(39149637)	C	AluSx	SINE/Alu	(8)	304	1	3245886
1581	16.9	15.9	3.5	chr5	142388623	142388958	(39149301)	C	MER31B	LTR/ERV1	(78)	388	3	3245887
939	31.7	6.4	4.0	chr5	142616110	142616507	(38921752)	C	Helitron3Na_Mam	RC/Helitron	(75)	411	4	3246349
2399	11.2	0.0	0.0	chr5	142948823	142949116	(38589143)	+	AluSx1	SINE/Alu	1	294	(18)	3246942
100	0.0	2.2	0.0	chr5	142949166	142949257	(38589002)	+	(AG)n	Simple_repeat	1	94	(0)	3246943
37	6.5	0.0	0.0	chr5	143987369	143987416	(37550843)	+	(TCCTGCCT)n	Simple_repeat	1	48	(0)	3248574
143	13.2	1.5	2.9	chr5	143987420	143987693	(37550566)	+	(TTCC)n	Simple_repeat	1	278	(0)	3248575
2445	16.4	5.5	3.0	chr5	144013495	144013958	(37524301)	C	LTR06	LTR/ERV1	(0)	476	1	3248623
2052	19.4	0.5	1.5	chr5	144013959	144014326	(37523933)	C	MER57B2	LTR/ERV1	(37)	366	1	3248613
22	0.0	0.0	0.0	chr5	145961175	145961198	(35577061)	+	(T)n	Simple_repeat	1	24	(0)	3251599
540	33.0	3.3	0.4	chr5	146190348	146190581	(35347678)	+	MIR	SINE/MIR	12	252	(10)	3252066
53	19.2	0.0	1.8	chr5	146190587	146190696	(35347563)	+	GA-rich	Low_complexity	1	110	(0)	3252067
35	0.0	0.0	0.0	chr5	146878728	146878759	(34659500)	+	(GCT)n	Simple_repeat	1	32	(0)	3253334
29389	7.0	3.5	2.0	chr5	147259650	147259896	(34278363)	C	HERVIP10FH-int	LTR/ERV1	(4069)	1033	783	3253950
113	11.8	6.8	0.0	chr5	147259897	147260116	(34278143)	+	(CT)n	Simple_repeat	1	235	(0)	3253954
2259	17.0	7.9	13.7	chr5	147260119	147261194	(34277065)	C	HERVIP10FH-int	LTR/ERV1	(4091)	1011	3	3253955
32	0.0	0.0	0.0	chr5	147372270	147372299	(34165960)	+	(T)n	Simple_repeat	1	30	(0)	3254142
21	23.4	0.0	0.0	chr5	147782642	147782692	(33755567)	+	(CAG)n	Simple_repeat	1	51	(0)	3254832
12	16.9	0.0	5.4	chr5	147782757	147782793	(33755466)	+	(CCTCCT)n	Simple_repeat	1	37	(0)	3254833
337	24.7	2.4	1.2	chr5	148011870	148011951	(33526308)	+	MLT1L	LTR/ERVL-MaLR	473	555	(55)	3255223
612	31.5	10.9	1.4	chr5	148738056	148738412	(32799847)	+	L2a	LINE/L2	2342	2736	(683)	3256349
251	27.7	4.9	15.3	chr5	148738752	148738934	(32799325)	C	LTR78B	LTR/ERV1	(1133)	163	1	3256350
314	25.7	12.2	0.7	chr5	148830305	148830478	(32707781)	C	MIR3	SINE/MIR	(11)	197	10	3256515
241	34.6	1.4	6.0	chr5	148931433	148931578	(32606681)	+	MIR	SINE/MIR	121	260	(2)	3256704
85	38.6	1.7	2.3	chr5	148931588	148932064	(32606195)	+	(CCTC)n	Simple_repeat	1	485	(0)	3256706
482	26.9	2.8	3.4	chr5	148932223	148932368	(32605891)	+	Plat_L3	LINE/CR1	2108	2252	(1334)	3256707
248	20.0	3.5	1.8	chr5	151115622	151115677	(30422582)	+	L2b	LINE/L2	3319	3375	(0)	3261187
265	22.2	7.7	0.0	chr5	151115710	151115781	(30422478)	C	Tigger16a	DNA/TcMar-Tigger	(106)	851	774	3261188
102	23.8	1.8	2.4	chr5	154632102	154632385	(26905874)	+	(TCCC)n	Simple_repeat	1	289	(0)	3267651
403	10.9	1.8	0.0	chr5	154632388	154632442	(26905817)	C	AluJo	SINE/Alu	(255)	57	2	3267652
521	25.2	11.1	9.5	chr5	154632443	154632735	(26905524)	C	L1ME3G	LINE/L1	(412)	512	227	3267653
28	34.9	2.2	3.3	chr5	154682789	154682966	(26855293)	+	(CTCCCCC)n	Simple_repeat	1	182	(0)	3267769
2347	13.3	2.8	2.8	chr5	157436080	157436443	(24101816)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3272658
6671	18.7	3.9	3.6	chr5	157436444	157436856	(24101403)	+	L1M4c	LINE/L1	4747	5168	(1208)	3272654
1711	25.2	10.6	1.8	chr5	158147995	158148604	(23389655)	+	L2a	LINE/L2	1919	2588	(831)	3274106
149	27.3	1.5	0.5	chr5	158148605	158148998	(23389261)	+	(CTTC)n	Simple_repeat	1	400	(0)	3274107
272	24.6	8.9	3.2	chr5	158148999	158149124	(23389135)	+	L2a	LINE/L2	2566	2699	(720)	3274106
15	14.8	3.0	2.9	chr5	158284118	158284150	(23254109)	+	(AC)n	Simple_repeat	1	34	(0)	3274343
573	36.4	7.1	5.8	chr5	158284259	158284772	(23253487)	+	L2	LINE/L2	2561	3081	(338)	3274344
188	21.0	1.3	3.3	chr5	158309840	158310312	(23227947)	+	(TTCC)n	Simple_repeat	1	479	(0)	3274392
29	28.8	8.3	0.6	chr5	158513829	158513997	(23024262)	+	GA-rich	Low_complexity	1	183	(0)	3274722
16	0.0	0.0	0.0	chr5	158514087	158514104	(23024155)	+	(GT)n	Simple_repeat	1	18	(0)	3274723
73	5.4	6.8	0.0	chr5	159050147	159050263	(22487996)	+	(TC)n	Simple_repeat	1	125	(0)	3275490
34	2.6	0.0	0.0	chr5	159099917	159099955	(22438304)	+	(A)n	Simple_repeat	1	39	(0)	3275549
32	18.1	3.1	0.0	chr5	159100169	159100233	(22438026)	+	GA-rich	Low_complexity	1	67	(0)	3275550
18	3.6	3.2	3.1	chr5	159208191	159208221	(22330038)	+	(AGC)n	Simple_repeat	1	32	(0)	3275706
266	28.6	0.0	1.2	chr5	159494960	159495044	(22043215)	C	MLT1K	LTR/ERVL-MaLR	(17)	578	495	3276214
841	29.9	12.0	0.6	chr5	159495068	159495414	(22042845)	C	MLT1K	LTR/ERVL-MaLR	(163)	432	41	3276214
24	14.2	0.0	0.0	chr5	159495433	159495565	(22042694)	+	(GA)n	Simple_repeat	1	133	(0)	3276215
929	27.1	3.1	1.1	chr5	159495566	159495852	(22042407)	C	MARNA	DNA/TcMar-Mariner	(57)	529	237	3276216
201	28.6	0.0	0.0	chr5	160481388	160481436	(21056823)	+	MIR3	SINE/MIR	121	169	(39)	3278244
69	14.9	0.0	4.1	chr5	160481445	160481519	(21056740)	+	(TCCC)n	Simple_repeat	1	71	(0)	3278245
4775	7.8	4.9	0.0	chr5	160481520	160482144	(21056115)	C	PABL_A	LTR/ERV1	(0)	660	4	3278246
441	31.5	11.0	1.5	chr5	163643497	163643702	(17894557)	C	MIRb	SINE/MIR	(10)	258	31	3282901
60	9.8	0.0	0.0	chr5	163643875	163643963	(17894296)	+	(AGAGAG)n	Simple_repeat	1	89	(0)	3282902
867	20.4	17.4	11.2	chr5	163644158	163644478	(17893781)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	3282903
700	29.0	4.0	3.6	chr5	164014793	164015039	(17523220)	C	MamTip3	DNA/hAT-Tip100	(233)	267	20	3283419
1384	22.7	12.6	5.6	chr5	164015124	164015585	(17522674)	+	MLT1D	LTR/ERVL-MaLR	7	505	(0)	3283420
34	2.9	0.0	0.0	chr5	164262075	164262110	(17276149)	+	(CCTC)n	Simple_repeat	1	36	(0)	3283756
2203	15.6	5.2	1.5	chr5	164262144	164262553	(17275706)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	3283757
28	3.3	0.0	0.0	chr5	165592544	165592574	(15945685)	+	(AGGA)n	Simple_repeat	1	31	(0)	3285558
65	28.0	0.0	5.0	chr5	165592624	165592862	(15945397)	+	GA-rich	Low_complexity	1	239	(0)	3285559
55	4.9	0.0	0.0	chr5	166979175	166979237	(14559022)	+	(AGC)n	Simple_repeat	1	63	(0)	3287637
505	22.6	0.7	2.8	chr5	168031460	168031600	(13506659)	C	MIRb	SINE/MIR	(16)	252	115	3289246
98	22.8	0.0	0.5	chr5	168031601	168031828	(13506431)	+	GA-rich	Low_complexity	1	226	(0)	3289247
191	27.1	5.0	6.6	chr5	168031830	168031949	(13506310)	C	MIRb	SINE/MIR	(142)	120	1	3289246
243	19.1	0.0	0.0	chr5	168031951	168031992	(13506267)	C	Tigger16b	DNA/TcMar-Tigger	(126)	210	169	3289248
1484	24.6	7.1	2.9	chr5	168624983	168625299	(12912960)	+	L1ME3A	LINE/L1	5805	6135	(38)	3290448
651	23.4	3.0	5.0	chr5	168625484	168625681	(12912578)	C	L1MEh	LINE/L1	(831)	1404	1205	3290447
315	31.5	1.8	4.3	chr5	168726222	168726337	(12811922)	C	L2c	LINE/L2	(0)	3387	3275	3290662
126	5.5	5.4	3.0	chr5	168726342	168726563	(12811696)	+	(GAGG)n	Simple_repeat	1	234	(0)	3290663
1939	11.2	0.3	11.5	chr5	168726692	168727031	(12811228)	+	AluSz	SINE/Alu	2	303	(9)	3290664
39	18.5	6.4	4.8	chr5	169097335	169097492	(12440767)	+	GA-rich	Low_complexity	1	160	(0)	3291244
293	24.1	8.2	0.0	chr5	169233653	169233764	(12304495)	C	L1ME3B	LINE/L1	(1875)	4271	4150	3291471
873	24.8	9.7	1.3	chr5	169233799	169234108	(12304151)	C	L1ME3B	LINE/L1	(1957)	4189	3851	3291471
12	19.1	2.1	6.2	chr5	169301281	169301327	(12236932)	+	GA-rich	Low_complexity	1	48	(0)	3291588
213	19.8	6.1	0.0	chr5	169301496	169301551	(12236708)	C	MIRc	SINE/MIR	(136)	132	70	3291589
2429	10.2	0.0	0.3	chr5	169961696	169962008	(11576251)	+	AluSx1	SINE/Alu	1	312	(0)	3292702
630	27.4	10.5	5.6	chr5	169962124	169962549	(11575710)	C	L2a	LINE/L2	(578)	2841	2393	3292701
46	0.0	0.0	0.0	chr5	171313353	171313391	(10224868)	+	(TC)n	Simple_repeat	1	39	(0)	3295012
15	24.0	2.0	1.9	chr5	171419565	171419615	(10118644)	+	(CCGGCC)n	Simple_repeat	1	52	(0)	3295244
14	23.7	0.0	4.2	chr5	171419854	171419901	(10118358)	+	(GCCG)n	Simple_repeat	1	48	(0)	3295245
18	10.3	2.0	8.0	chr5	171420047	171420095	(10118164)	+	(AGC)n	Simple_repeat	1	50	(0)	3295246
31	3.1	0.0	0.0	chr5	171420096	171420128	(10118131)	+	(GCG)n	Simple_repeat	1	33	(0)	3295247
17	39.2	1.1	0.0	chr5	171420262	171420355	(10117904)	+	(TGTC)n	Simple_repeat	1	95	(0)	3295248
34	29.0	5.7	0.0	chr5	171779748	171779887	(9758372)	+	GA-rich	Low_complexity	1	148	(0)	3296024
457	25.9	12.2	3.5	chr5	171779908	171780079	(9758180)	C	MIRb	SINE/MIR	(34)	234	46	3296025
4905	16.3	4.5	3.7	chr5	171930776	171931798	(9606461)	+	L1MC1	LINE/L1	4233	5268	(878)	3296303
73	7.8	1.0	0.0	chr5	171931799	171931895	(9606364)	+	(TC)n	Simple_repeat	1	98	(0)	3296306
1899	16.9	0.0	0.0	chr5	171931896	171932174	(9606085)	C	AluJb	SINE/Alu	(33)	279	1	3296307
44	2.9	6.6	2.5	chr5	172805225	172805300	(8732959)	+	(GATA)n	Simple_repeat	1	81	(0)	3298238
102	22.1	0.8	3.1	chr5	172805301	172805559	(8732700)	+	GA-rich	Low_complexity	1	261	(0)	3298239
210	30.8	16.8	0.9	chr5	173198455	173198559	(8339700)	+	L2b	LINE/L2	3259	3420	(6)	3299146
286	26.9	0.5	0.0	chr5	173198562	173198633	(8339626)	C	MIR	SINE/MIR	(1)	267	194	3299147
95	25.2	2.9	1.8	chr5	173198634	173198909	(8339350)	+	(TTCC)n	Simple_repeat	1	284	(0)	3299148
2178	14.9	0.3	0.7	chr5	173198914	173198934	(8339325)	C	AluSx	SINE/Alu	(3)	309	290	3299149
79	3.9	1.7	4.2	chr5	173198935	173199051	(8339208)	+	(TCCT)n	Simple_repeat	1	119	(0)	3299150
2178	14.9	0.3	0.7	chr5	173199052	173199338	(8338921)	C	AluSx	SINE/Alu	(23)	289	2	3299149
18	13.5	3.0	0.0	chr5	173283426	173283458	(8254801)	+	GA-rich	Low_complexity	1	34	(0)	3299339
44	2.4	0.0	0.0	chr5	173283473	173283514	(8254745)	+	(GA)n	Simple_repeat	1	42	(0)	3299340
223	31.8	4.5	0.9	chr5	173294383	173294490	(8243769)	+	MIR	SINE/MIR	32	143	(119)	3299368
1448	21.6	11.4	0.6	chr5	173491087	173491444	(8046815)	+	MLT1D	LTR/ERVL-MaLR	4	405	(100)	3299699
832	14.5	6.5	0.7	chr5	173491452	173491597	(8046662)	C	L1PA17	LINE/L1	(20)	6146	5992	3299700
21	16.9	0.0	0.0	chr5	173491598	173491638	(8046621)	+	(CCCT)n	Simple_repeat	1	41	(0)	3299701
768	14.8	0.8	0.0	chr5	173491639	173491760	(8046499)	C	L1PA17	LINE/L1	(152)	6014	5892	3299700
485	24.3	0.0	0.9	chr5	173491765	173491876	(8046383)	+	MLT1D	LTR/ERVL-MaLR	395	505	(0)	3299699
21	18.1	0.0	4.2	chr5	173770690	173770737	(7767522)	+	(TG)n	Simple_repeat	1	48	(0)	3300253
78	8.0	6.8	0.0	chr5	173770737	173770869	(7767390)	+	(GA)n	Simple_repeat	1	142	(0)	3300254
560	25.6	6.4	1.8	chr5	173770927	173771089	(7767170)	+	L2c	LINE/L2	3215	3385	(2)	3300248
764	27.7	17.1	3.4	chr5	173881577	173881848	(7656411)	+	MER113	DNA/hAT-Charlie	170	519	(2)	3300502
368	32.8	13.8	4.3	chr5	173881849	173882278	(7655981)	C	L2b	LINE/L2	(543)	2876	2403	3300500
670	20.2	13.8	0.0	chr5	173882279	173882441	(7655818)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	3300504
250	17.9	2.2	1.0	chr5	174320498	174321006	(7217253)	+	(TTCC)n	Simple_repeat	1	520	(0)	3301279
1515	15.8	2.6	0.0	chr5	174742950	174743215	(6795044)	+	L1PA17	LINE/L1	5894	6166	(0)	3302137
120	14.1	0.5	1.0	chr5	174743270	174743474	(6794785)	+	(CTCC)n	Simple_repeat	1	206	(0)	3302138
2065	18.2	3.4	6.0	chr5	174743475	174743925	(6794334)	C	L1MB3	LINE/L1	(84)	6099	5661	3302139
1586	21.5	1.4	6.5	chr5	176441175	176441402	(5096857)	C	MER101	LTR/ERV1	(245)	229	9	3305259
437	35.6	4.0	2.5	chr5	176441401	176441599	(5096660)	C	LTR16E2	LTR/ERVL	(273)	295	94	3305261
247	38.2	1.3	3.7	chr5	176441579	176441741	(5096518)	C	LTR16E2	LTR/ERVL	(492)	159	1	3305261
1140	32.6	3.5	1.9	chr5	176441918	176442395	(5095864)	C	ERV3-16A3_I-int	LTR/ERVL	(111)	5115	4630	3305262
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
2211	12.9	0.3	0.0	chr5	178716797	178717107	(2821152)	+	AluSx	SINE/Alu	1	312	(0)	3309690
884	30.1	20.0	7.9	chr5	178717108	178718054	(2820205)	C	L2a	LINE/L2	(482)	2937	1842	3309689
245	28.6	21.8	2.2	chr5	178992351	178992486	(2545773)	+	MER91A	DNA/hAT-Tip100	1	170	(26)	3310179
26	27.6	3.9	0.9	chr5	178992858	178992960	(2545299)	+	GA-rich	Low_complexity	1	107	(0)	3310180
34	16.9	1.0	7.0	chr5	179345199	179345258	(2193001)	+	(CGG)n	Simple_repeat	1	56	(0)	3310683
28	0.0	0.0	0.0	chr5	179345259	179345284	(2192975)	+	(GCA)n	Simple_repeat	1	26	(0)	3310684
34	16.9	1.0	7.0	chr5	179345285	179345322	(2192937)	+	(CGG)n	Simple_repeat	3	39	(0)	3310685
41	19.8	3.9	3.7	chr5	179345453	179345582	(2192677)	+	GA-rich	Low_complexity	1	135	(0)	3310686
18	19.8	2.1	2.0	chr5	179345616	179345663	(2192596)	+	(CGC)n	Simple_repeat	1	49	(0)	3310687
796	21.6	6.1	0.0	chr5	179364042	179364226	(2174033)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	192	3310707
14	15.3	0.0	0.0	chr5	181032142	181032170	(506089)	+	(ACAC)n	Simple_repeat	1	29	(0)	3313544
49	5.7	5.4	0.0	chr5	181032190	181032263	(505996)	+	(GA)n	Simple_repeat	1	78	(0)	3313545
7002	11.5	11.0	0.2	chr5	181032306	181033422	(504837)	+	LTR12D	LTR/ERV1	1	1253	(1)	3313546
2655	5.2	0.3	0.0	chr5	181063224	181063529	(474730)	+	AluY	SINE/Alu	1	307	(4)	3313593
620	19.6	10.7	4.8	chr5	181063530	181063656	(474603)	C	MER63A	DNA/hAT-Blackjack	(39)	171	34	3313592
1049	23.3	9.6	10.2	chr5	181063788	181064006	(474253)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	176	3313594
835	18.1	0.0	0.0	chr5	181064007	181064139	(474120)	C	AluSz6	SINE/Alu	(179)	133	1	3313595
212	38.3	7.0	0.8	chr6	287597	287717	(170518262)	+	MamRTE1	LINE/RTE-BovB	3552	3680	(132)	3314643
40	2.1	6.1	0.0	chr6	287757	287805	(170518174)	+	(CT)n	Simple_repeat	1	52	(0)	3314644
510	31.2	0.3	0.0	chr6	371012	372542	(170433437)	+	(AGCAGC)n	Simple_repeat	1	1535	(0)	3314739
291	25.6	11.3	0.0	chr6	372556	372641	(170433338)	C	MIR	SINE/MIR	(0)	262	166	3314740
539	25.1	7.0	0.5	chr6	898278	898465	(169907514)	C	MER5C	DNA/hAT-Charlie	(0)	313	113	3315368
24	19.2	4.8	3.5	chr6	898478	898525	(169907454)	+	(CTCCTTC)n	Simple_repeat	1	86	(0)	3315369
13	13.9	2.9	2.9	chr6	898526	898559	(169907420)	+	(CCTTTC)n	Simple_repeat	1	35	(0)	3315370
2251	24.6	5.6	1.8	chr6	898670	899290	(169906689)	+	L1MC4	LINE/L1	6469	7114	(928)	3315371
388	27.4	6.5	0.5	chr6	1002889	1003069	(169802910)	C	L1MC4a	LINE/L1	(0)	7995	7692	3315499
70	25.4	3.4	0.0	chr6	1003072	1003277	(169802702)	+	(TCTCTC)n	Simple_repeat	1	213	(0)	3315500
99	17.5	0.0	0.0	chr6	1027672	1027849	(169778130)	+	G-rich	Low_complexity	1	178	(0)	3315528
379	40.4	0.6	0.0	chr6	1027887	1028047	(169777932)	+	L2b	LINE/L2	3213	3374	(1)	3315529
113	29.3	4.4	0.7	chr6	1399077	1399510	(169406469)	+	GA-rich	Low_complexity	1	453	(0)	3316052
889	12.7	0.0	0.8	chr6	1541607	1541732	(169264247)	C	AluJr	SINE/Alu	(161)	151	27	3316287
836	25.3	1.2	0.0	chr6	1541724	1541893	(169264086)	+	AluJb	SINE/Alu	137	308	(4)	3316288
162	26.1	0.9	1.6	chr6	1541901	1542324	(169263655)	+	GA-rich	Low_complexity	1	428	(0)	3316289
310	25.6	16.4	1.7	chr6	1542344	1542462	(169263517)	C	MER103C	DNA/hAT-Charlie	(15)	282	143	3316290
187	26.3	2.5	1.6	chr6	2468021	2468616	(168337363)	+	GA-rich	Low_complexity	1	611	(0)	3317480
418	32.6	3.2	5.2	chr6	2468747	2468937	(168337042)	C	UCON26	Unknown	(8)	335	149	3317481
2377	9.6	0.0	0.0	chr6	2985471	2985772	(167820207)	C	AluSx1	SINE/Alu	(10)	302	1	3318206
2303	11.1	1.3	0.0	chr6	3401060	3401365	(167404614)	+	AluSx1	SINE/Alu	1	310	(2)	3318837
317	13.8	6.9	22.3	chr6	3401366	3401428	(167404551)	+	L1MB4	LINE/L1	6136	6180	(0)	3318836
192	31.9	6.5	2.5	chr6	3401830	3401948	(167404031)	+	L2c	LINE/L2	2361	2484	(935)	3318838
196	25.6	0.0	0.0	chr6	4018919	4018961	(166787018)	+	L2b	LINE/L2	3332	3374	(1)	3319820
63	16.5	2.3	0.8	chr6	4207088	4207215	(166598764)	+	(CCTC)n	Simple_repeat	1	131	(0)	3320106
14	14.7	1.4	12.7	chr6	4207169	4207238	(166598741)	+	(CTT)n	Simple_repeat	1	71	(0)	3320107
53	19.7	0.8	3.8	chr6	6293703	6293833	(164512146)	+	GA-rich	Low_complexity	1	132	(0)	3323214
232	32.0	2.6	0.0	chr6	6293839	6293913	(164512066)	+	UCON55	DNA/TcMar-Tigger	116	192	(0)	3323215
40	21.7	5.8	0.8	chr6	6628234	6628353	(164177626)	+	(TCCT)n	Simple_repeat	1	127	(0)	3323666
435	32.1	5.9	5.2	chr6	6628485	6628532	(164177447)	+	L2c	LINE/L2	3088	3140	(247)	3323667
32	5.3	0.0	0.0	chr6	6628533	6628571	(164177408)	+	(TCTCTCTG)n	Simple_repeat	1	39	(0)	3323668
17	4.3	0.0	0.0	chr6	7450468	7450491	(163355488)	+	(CAG)n	Simple_repeat	1	24	(0)	3325172
2145	10.0	1.1	0.0	chr6	7450594	7450914	(163355065)	C	AluSx	SINE/Alu	(0)	312	1	3325173
1270	18.5	15.4	2.1	chr6	9875963	9876287	(160929692)	+	MLT1A	LTR/ERVL-MaLR	1	467	(0)	3328650
11155	12.2	0.9	0.4	chr6	10092846	10094437	(160711542)	C	MSTA-int	LTR/ERVL-MaLR	(31)	1600	1	3328941
55	21.4	0.8	0.8	chr6	11727885	11728008	(159077971)	+	G-rich	Low_complexity	1	125	(0)	3331655
911	25.6	3.1	0.0	chr6	11877779	11878055	(158927924)	C	L1ME3A	LINE/L1	(9)	6164	5879	3331849
24	14.9	2.6	7.5	chr6	12285075	12285152	(158520827)	+	(TAA)n	Simple_repeat	1	80	(0)	3332448
645	24.9	1.2	1.2	chr6	12529467	12529637	(158276342)	C	MER5A	DNA/hAT-Charlie	(0)	189	19	3332827
2376	11.7	0.6	3.5	chr6	12676696	12677068	(158128911)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	3333022
29	7.7	5.1	3.2	chr6	12677112	12677142	(158128837)	+	(TTCC)n	Simple_repeat	1	33	(0)	3333023
55	4.9	0.0	0.0	chr6	12677143	12677205	(158128774)	+	(CCTCCCTC)n	Simple_repeat	1	63	(0)	3333024
29	7.7	5.1	3.2	chr6	12677206	12677232	(158128747)	+	(TTCC)n	Simple_repeat	2	28	(0)	3333025
1533	17.5	3.5	4.2	chr6	12677233	12677518	(158128461)	C	AluJr	SINE/Alu	(28)	284	1	3333026
197	30.2	10.6	1.9	chr6	12921314	12921419	(157884560)	C	L2b	LINE/L2	(17)	3409	3270	3333411
218	15.2	1.9	1.4	chr6	12921451	12921866	(157884113)	+	GA-rich	Low_complexity	1	424	(0)	3333412
243	31.9	1.1	2.1	chr6	12921924	12922016	(157883963)	+	MIRc	SINE/MIR	91	182	(86)	3333413
17	13.4	0.0	2.9	chr6	13924389	13924423	(156881556)	+	GA-rich	Low_complexity	1	35	(0)	3335168
18	19.2	2.0	2.0	chr6	13924572	13924620	(156881359)	+	(GGT)n	Simple_repeat	1	50	(0)	3335169
404	33.3	3.0	6.4	chr6	13943531	13943703	(156862276)	+	L2c	LINE/L2	3219	3385	(2)	3335197
239	25.6	7.5	0.0	chr6	13943718	13943803	(156862176)	C	MER67B	LTR/ERV1	(16)	527	435	3335198
296	21.5	0.0	3.7	chr6	13943904	13943985	(156861994)	C	MER67B	LTR/ERV1	(313)	398	320	3335198
1404	21.1	8.2	3.7	chr6	13943986	13944457	(156861522)	C	MER67B	LTR/ERV1	(255)	406	5	3335198
2564	6.2	0.0	0.3	chr6	14043939	14044244	(156761735)	C	AluY	SINE/Alu	(6)	305	1	3335345
493	19.1	13.4	0.7	chr6	15251563	15251699	(155554280)	+	Tigger13a	DNA/TcMar-Tigger	135	291	(480)	3337665
13	4.0	3.3	6.5	chr6	16023224	16023253	(154782726)	+	(CTTC)n	Simple_repeat	1	31	(0)	3338860
47	8.0	4.9	0.0	chr6	16023261	16023341	(154782638)	+	(TC)n	Simple_repeat	1	85	(0)	3338861
2418	9.0	1.6	0.7	chr6	16023342	16023635	(154782344)	C	AluSp	SINE/Alu	(15)	298	1	3338862
441	28.9	5.0	3.0	chr6	16853060	16853272	(153952707)	C	MIRc	SINE/MIR	(40)	228	11	3340166
20	33.8	4.5	3.8	chr6	17432757	17432934	(153373045)	+	(CTTCC)n	Simple_repeat	1	186	(0)	3341147
36	4.5	2.2	0.0	chr6	17432940	17432985	(153372994)	+	(CCTC)n	Simple_repeat	1	47	(0)	3341148
54	27.7	1.6	5.5	chr6	17432986	17433015	(153372964)	+	(CTTT)n	Simple_repeat	3	32	(0)	3341149
265	26.2	7.2	8.0	chr6	17433016	17433127	(153372852)	C	MIR1_Amn	SINE/MIR	(84)	146	36	3341150
420	18.9	3.1	2.3	chr6	18565301	18566315	(152239664)	+	(CTTC)n	Simple_repeat	1	1047	(0)	3343277
614	21.1	6.6	4.4	chr6	18642020	18642358	(152163621)	C	MER31B	LTR/ERV1	(5)	461	1	3343388
1593	18.2	14.8	0.3	chr6	20694727	20695095	(150110884)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3346477
255	18.6	9.2	0.0	chr6	20811286	20811344	(149994635)	+	LTR65	LTR/ERV1	321	385	(284)	3346658
1813	25.4	6.7	5.5	chr6	20811418	20811824	(149994155)	C	L1MC5a	LINE/L1	(415)	2362	1944	3346659
1872	12.8	3.9	1.1	chr6	21572612	21572912	(149233067)	C	AluSz6	SINE/Alu	(0)	312	1	3347883
1517	27.4	10.9	1.8	chr6	23044758	23045258	(147760721)	C	MLT1G1	LTR/ERVL-MaLR	(27)	552	1	3350067
93	9.8	0.0	0.0	chr6	23045289	23045422	(147760557)	+	(AGGG)n	Simple_repeat	1	134	(0)	3350068
181	33.1	3.0	0.6	chr6	23619672	23620367	(147185612)	+	GA-rich	Low_complexity	1	717	(0)	3350791
297	32.3	1.5	1.5	chr6	23620414	23620548	(147185431)	+	L1MEb	LINE/L1	116	250	(5886)	3350792
1685	28.2	5.7	5.3	chr6	23620566	23620618	(147185361)	+	L1MEb	LINE/L1	179	236	(5900)	3350792
1571	20.3	3.2	2.0	chr6	23622981	23623286	(147182693)	+	AluJb	SINE/Alu	1	310	(2)	3350796
2333	26.1	7.2	2.7	chr6	23623675	23624338	(147181641)	C	L1MCc	LINE/L1	(2085)	4856	4181	3350794
4118	14.4	0.5	0.1	chr6	24237405	24238077	(146567902)	+	L1PA16	LINE/L1	5477	6151	(15)	3351581
640	20.2	0.0	1.8	chr6	25070334	25070447	(145735532)	+	FLAM_A	SINE/Alu	4	115	(27)	3353043
72	12.4	0.0	1.6	chr6	25070452	25070572	(145735407)	+	(AGGA)n	Simple_repeat	1	121	(0)	3353044
81	27.1	5.7	1.5	chr6	25450720	25450874	(145355105)	+	(CTTCC)n	Simple_repeat	1	179	(161)	3353654
2423	11.1	1.3	0.0	chr6	27156689	27156995	(143648984)	+	AluSz	SINE/Alu	1	311	(1)	3356391
48	31.3	0.7	1.3	chr6	27156996	27157148	(143648831)	+	A-rich	Low_complexity	1	154	(0)	3356392
201	34.5	1.2	3.5	chr6	27157178	27157264	(143648715)	C	L2c	LINE/L2	(222)	3165	3081	3356393
88	30.1	2.2	2.4	chr6	27500145	27500466	(143305513)	+	A-rich	Low_complexity	1	329	(0)	3357000
765	17.9	2.5	8.2	chr6	27500480	27500649	(143305330)	+	AluJb	SINE/Alu	136	295	(17)	3356999
2015	22.3	7.9	11.2	chr6	27500655	27501240	(143304739)	+	L1M5	LINE/L1	3048	3670	(2476)	3357001
903	26.0	9.9	1.5	chr6	27651169	27651508	(143154471)	+	L1ME3A	LINE/L1	5643	6014	(159)	3357300
31	0.0	0.0	0.0	chr6	27651559	27651585	(143154394)	+	(GT)n	Simple_repeat	1	27	(0)	3357301
252	23.7	0.0	6.3	chr6	27651713	27651775	(143154204)	C	MLT2D	LTR/ERVL	(65)	495	437	3357302
3202	18.2	2.8	4.3	chr6	27651806	27652595	(143153384)	+	L1MB3	LINE/L1	3169	3946	(2194)	3357303
684	4.8	0.0	0.0	chr6	27721119	27721201	(143084778)	C	tRNA-Leu-TTA	tRNA	(3)	83	1	3357459
13	18.4	0.0	0.0	chr6	27721443	27721473	(143084506)	+	GA-rich	Low_complexity	1	31	(0)	3357460
1262	15.7	8.8	0.9	chr6	27836797	27837025	(142968954)	C	AluJo	SINE/Alu	(27)	285	37	3357679
2957	15.9	7.6	4.3	chr6	27837035	27837666	(142968313)	C	MER51D	LTR/ERV1	(2)	655	1	3357680
253	28.3	8.4	6.6	chr6	28719144	28719400	(142086579)	C	L1MC5a	LINE/L1	(1697)	1080	819	3359086
649	1.4	0.0	0.0	chr6	28719704	28719775	(142086204)	+	tRNA-Ala-GCY_	tRNA	1	72	(3)	3359087
31	34.5	2.1	4.1	chr6	29773273	29773465	(141032514)	+	(TTTC)n	Simple_repeat	1	189	(0)	3360637
961	28.2	12.9	3.6	chr6	30087032	30087561	(140718418)	C	L2a	LINE/L2	(0)	3426	2820	3361040
26	0.0	0.0	0.0	chr6	30087562	30087586	(140718393)	+	(GATT)n	Simple_repeat	1	25	(0)	3361041
676	19.7	0.0	4.1	chr6	30087587	30087708	(140718271)	C	AluJr	SINE/Alu	(194)	118	2	3361042
807	12.0	1.5	7.0	chr6	31836664	31836805	(138969174)	C	AluSx	SINE/Alu	(178)	134	1	3363986
32	16.1	4.2	1.4	chr6	32415903	32415973	(138390006)	+	GA-rich	Low_complexity	1	74	(0)	3364875
73	10.2	7.4	5.1	chr6	33028951	33029152	(137776827)	+	(TCTCCC)n	Simple_repeat	1	217	(0)	3365773
356	30.6	10.5	5.3	chr6	33299810	33300131	(137505848)	C	L2b	LINE/L2	(7)	3380	3080	3366146
595	28.7	2.1	6.5	chr6	33300275	33300380	(137505599)	+	Charlie1	DNA/hAT-Charlie	5	99	(2682)	3366147
446	27.5	2.2	0.8	chr6	33566029	33566160	(137239819)	+	SVA_B	Retroposon/SVA	205	338	(1045)	3366746
564	19.4	11.7	15.4	chr6	33566150	33566435	(137239544)	C	LTR54	LTR/ERV1	(192)	318	45	3366743
776	16.7	0.4	0.6	chr6	33566161	33566182	(137239797)	C	FLAM_C	SINE/Alu	(82)	172	9	3366747
61	13.8	0.0	1.8	chr6	33566436	33566544	(137239435)	+	(TCCC)n	Simple_repeat	1	109	(0)	3366748
1048	14.3	3.7	6.1	chr6	33566549	33566744	(137239235)	C	AluJr	SINE/Alu	(38)	274	84	3366749
1784	17.7	0.0	3.0	chr6	34366098	34366402	(136439577)	+	AluJo	SINE/Alu	14	309	(3)	3368220
48	0.0	0.0	2.1	chr6	34366468	34366515	(136439464)	+	(GAGG)n	Simple_repeat	1	48	(0)	3368221
1005	17.1	0.6	0.0	chr6	34366564	34366721	(136439258)	C	AluJr	SINE/Alu	(18)	294	136	3368222
2656	18.4	5.8	2.7	chr6	34632907	34633570	(136172409)	+	L1M4a2	LINE/L1	2111	2776	(3370)	3368794
1205	15.9	0.5	3.2	chr6	34633575	34633763	(136172216)	+	AluJr	SINE/Alu	7	190	(122)	3368795
22	19.9	2.7	5.3	chr6	34633779	34633852	(136172127)	+	A-rich	Low_complexity	1	76	(0)	3368796
49	11.6	1.1	2.2	chr6	34633829	34633917	(136172062)	+	(AGGG)n	Simple_repeat	1	90	(0)	3368797
405	14.9	0.0	0.0	chr6	34633918	34633984	(136171995)	+	L1M5	LINE/L1	2763	2829	(3317)	3368798
777	16.7	1.6	1.6	chr6	34633988	34634113	(136171866)	+	AluJo	SINE/Alu	11	136	(176)	3368799
1097	24.6	7.0	3.0	chr6	36654952	36655323	(134150656)	C	MLT1G1	LTR/ERVL-MaLR	(7)	572	185	3373019
351	21.0	10.0	0.0	chr6	36655354	36655434	(134150545)	C	MLT1G1	LTR/ERVL-MaLR	(488)	91	2	3373019
1760	27.1	6.7	2.3	chr6	37207620	37208528	(133597451)	C	L2a	LINE/L2	(1)	3425	2449	3374237
2264	9.6	0.0	0.0	chr6	37208541	37208857	(133597122)	C	AluSq	SINE/Alu	(0)	313	2	3374238
7127	13.0	5.2	3.8	chr6	37221661	37222920	(133583059)	C	MER52C	LTR/ERV1	(0)	1278	1	3374268
1690	22.7	8.1	5.2	chr6	37222921	37223513	(133582466)	+	L1MEd	LINE/L1	903	1517	(5569)	3374265
2005	18.9	3.3	1.9	chr6	37399610	37400039	(133405940)	+	MLT2B4	LTR/ERVL	1	451	(69)	3374607
77	17.1	0.0	0.7	chr6	37400048	37400187	(133405792)	+	(CCTC)n	Simple_repeat	1	140	(0)	3374608
313	9.8	0.0	0.0	chr6	37400190	37400230	(133405749)	+	MLT2B4	LTR/ERVL	519	559	(0)	3374607
227	21.1	0.0	5.0	chr6	37400243	37400302	(133405677)	C	L2-1_AMi	LINE/L2	(1047)	188	132	3374609
16	21.4	1.9	3.7	chr6	37697791	37697843	(133108136)	+	G-rich	Low_complexity	1	54	(0)	3375150
18	15.0	0.0	7.7	chr6	37697920	37697971	(133108008)	+	(CTC)n	Simple_repeat	1	52	(0)	3375151
20	22.2	7.6	2.0	chr6	37697972	37698009	(133107970)	+	(CGCT)n	Simple_repeat	3	99	(0)	3375152
126	6.5	5.1	0.0	chr6	37698157	37698352	(133107627)	+	(TC)n	Simple_repeat	1	206	(0)	3375153
1381	26.6	9.2	10.9	chr6	39116028	39116887	(131689092)	C	L2a	LINE/L2	(0)	3426	2562	3377479
1696	15.5	4.3	0.0	chr6	39662896	39663159	(131142820)	C	AluJb	SINE/Alu	(2)	310	35	3378336
51	29.6	4.1	0.5	chr6	41342367	41342561	(129463418)	+	(TCTC)n	Simple_repeat	1	203	(0)	3380979
29	24.1	5.8	1.6	chr6	41546257	41546376	(129259603)	+	(CTCG)n	Simple_repeat	1	127	(0)	3381373
192	0.0	0.6	0.0	chr6	42262435	42262600	(128543379)	+	(AG)n	Simple_repeat	1	167	(0)	3382890
15	15.8	0.0	5.1	chr6	42746494	42746532	(128059447)	+	(GTGG)n	Simple_repeat	1	39	(0)	3383927
12	26.2	1.7	4.9	chr6	42746533	42746547	(128059432)	+	G-rich	Low_complexity	15	61	(0)	3383928
323	8.2	12.5	0.0	chr6	42787485	42787533	(128018446)	+	LTR8	LTR/ERV1	548	603	(88)	3384033
1007	29.4	15.1	7.0	chr6	42787534	42787882	(128018097)	C	L2c	LINE/L2	(71)	2223	1816	3384032
1072	17.3	1.9	6.8	chr6	42787887	42788106	(128017873)	C	AluJb	SINE/Alu	(7)	305	97	3384034
2171	11.9	3.2	0.0	chr6	43189532	43189833	(127616146)	C	AluSx1	SINE/Alu	(0)	312	1	3384880
332	28.7	9.2	5.1	chr6	43189956	43190387	(127615592)	C	L1ME3G	LINE/L1	(225)	699	21	3384881
15	17.6	3.1	0.0	chr6	44579158	44579189	(126226790)	+	(CT)n	Simple_repeat	1	33	(0)	3387441
17	28.2	3.3	0.0	chr6	44579288	44579306	(126226673)	+	(CT)n	Simple_repeat	1	20	(0)	3387442
30	5.7	0.0	0.0	chr6	44579307	44579343	(126226636)	+	(CTCC)n	Simple_repeat	1	37	(0)	3387443
17	28.2	3.3	0.0	chr6	44579344	44579384	(126226595)	+	(CT)n	Simple_repeat	1	42	(0)	3387444
59	4.8	0.0	0.0	chr6	45422682	45422747	(125383232)	+	(CAG)n	Simple_repeat	1	66	(0)	3388618
39	4.6	0.0	0.0	chr6	45422750	45422794	(125383185)	+	(GGC)n	Simple_repeat	1	45	(0)	3388619
788	19.9	5.8	0.0	chr6	45904401	45904561	(124901418)	+	MER45A	DNA/hAT-Tip100	7	177	(1)	3389363
20	36.0	2.9	0.9	chr6	45904627	45904730	(124901249)	+	(CTCTCT)n	Simple_repeat	1	107	(0)	3389364
35	28.0	0.8	3.3	chr6	45904731	45904744	(124901235)	+	(CCCT)n	Simple_repeat	3	121	(0)	3389365
12750	12.2	2.2	1.4	chr6	45904764	45906564	(124899415)	C	L1PA16	LINE/L1	(31)	6838	5017	3389366
41	17.1	3.5	0.0	chr6	46734307	46734391	(124071588)	+	GA-rich	Low_complexity	1	88	(0)	3390625
16	0.0	4.2	4.0	chr6	46734392	46734415	(124071564)	+	(GT)n	Simple_repeat	1	25	(0)	3390626
94	0.0	1.1	1.1	chr6	46734416	46734503	(124071476)	+	(GA)n	Simple_repeat	1	89	(0)	3390627
2324	11.0	1.0	1.0	chr6	46734541	46734849	(124071130)	+	AluSc8	SINE/Alu	1	309	(2)	3390628
102	26.8	1.2	3.7	chr6	46959512	46959567	(123846412)	+	G-rich	Low_complexity	1	55	(0)	3390997
36	2.7	0.0	0.0	chr6	46959568	46959605	(123846374)	+	(AAGG)n	Simple_repeat	1	38	(0)	3390998
102	26.8	1.2	3.7	chr6	46959606	46959781	(123846198)	+	G-rich	Low_complexity	56	229	(0)	3390999
30	3.1	0.0	0.0	chr6	46959782	46959814	(123846165)	+	(GGAA)n	Simple_repeat	1	33	(0)	3391000
102	26.8	1.2	3.7	chr6	46959815	46959925	(123846054)	+	G-rich	Low_complexity	230	334	(0)	3391001
400	26.7	17.1	0.7	chr6	46959998	46960284	(123845695)	+	L1ME3Cz	LINE/L1	252	595	(402)	3391002
1274	20.2	14.2	14.7	chr6	49564328	49564844	(121241135)	+	MER67D	LTR/ERV1	1	514	(0)	3394573
1972	13.0	0.0	6.3	chr6	49565078	49565393	(121240586)	C	AluSz6	SINE/Alu	(16)	296	1	3394574
1035	16.0	0.0	0.0	chr6	49905367	49905522	(120900457)	+	MER67C	LTR/ERV1	247	402	(309)	3395023
422	26.8	11.1	1.2	chr6	49905491	49905660	(120900319)	+	MER67C	LTR/ERV1	269	457	(57)	3395023
357	18.0	5.3	3.3	chr6	49905641	49905732	(120900247)	+	MER92B	LTR/ERV1	543	636	(0)	3395024
37	26.1	4.8	0.0	chr6	50820853	50820976	(119985003)	+	GA-rich	Low_complexity	1	130	(0)	3396208
117	12.2	1.5	1.0	chr6	50902324	50902520	(119903459)	+	(AAGG)n	Simple_repeat	1	200	(0)	3396305
1858	19.2	0.0	0.0	chr6	53110677	53110968	(117695011)	+	AluJb	SINE/Alu	5	296	(16)	3399557
564	34.2	5.4	3.8	chr6	54170553	54170789	(116635190)	+	MIRb	SINE/MIR	22	262	(6)	3401278
13	15.5	1.9	9.3	chr6	54170790	54170842	(116635137)	+	(TCCTTT)n	Simple_repeat	1	54	(0)	3401279
667	15.7	4.0	0.8	chr6	56176694	56176815	(114629164)	+	L1MB1	LINE/L1	6527	6652	(14)	3403849
52	36.0	1.2	3.9	chr6	56176828	56177154	(114628825)	+	GA-rich	Low_complexity	1	331	(0)	3403853
1352	21.6	6.5	5.8	chr6	65059206	65059698	(105746281)	C	MER67C	LTR/ERV1	(0)	514	59	3412636
354	33.7	15.1	6.3	chr6	70128120	70128607	(100677372)	C	L2b	LINE/L2	(957)	2462	1925	3418832
1718	18.8	5.4	4.5	chr6	70128624	70129165	(100676814)	C	MER67C	LTR/ERV1	(3)	511	1	3418834
2333	9.2	0.7	0.3	chr6	71610947	71611238	(99194741)	+	AluSg	SINE/Alu	1	293	(17)	3420839
41	34.6	0.6	1.3	chr6	71611386	71611543	(99194436)	+	(CTCTTT)n	Simple_repeat	1	159	(0)	3420840
1193	18.9	1.0	0.0	chr6	71645204	71645404	(99160575)	C	MSTD	LTR/ERVL-MaLR	(0)	396	194	3420873
360	27.2	0.0	1.2	chr6	71645754	71645835	(99160144)	C	MSTD	LTR/ERVL-MaLR	(315)	81	1	3420873
230	32.6	12.3	3.0	chr6	71820392	71820590	(98985389)	+	L2c	LINE/L2	3025	3244	(143)	3421093
36	4.5	2.2	0.0	chr6	71886599	71886644	(98919335)	+	(GCCCCA)n	Simple_repeat	1	47	(0)	3421175
26	19.7	1.7	0.0	chr6	71886865	71886923	(98919056)	+	(GCT)n	Simple_repeat	1	60	(0)	3421176
2407	18.3	1.2	4.5	chr6	71940523	71941054	(98864925)	C	MER67D	LTR/ERV1	(0)	514	1	3421239
254	30.6	10.5	0.0	chr6	73769692	73769802	(97036177)	C	L2	LINE/L2	(1061)	2358	2235	3424200
2523	16.4	4.9	5.4	chr6	73769879	73770395	(97035584)	C	MER67D	LTR/ERV1	(0)	514	1	3424201
740	21.3	3.8	17.2	chr6	75993288	75993502	(94812477)	C	MLT1A	LTR/ERVL-MaLR	(18)	378	173	3427146
15	16.6	0.0	5.1	chr6	75993505	75993543	(94812436)	+	GA-rich	Low_complexity	1	39	(0)	3427147
350	10.2	0.0	18.8	chr6	75993565	75993660	(94812319)	C	MLT1A	LTR/ERVL-MaLR	(241)	124	47	3427146
50	26.9	0.7	0.7	chr6	77756579	77756728	(93049251)	+	(TCTC)n	Simple_repeat	1	150	(0)	3429176
12	28.6	0.0	3.7	chr6	77756689	77756742	(93049237)	+	(TCTA)n	Simple_repeat	1	54	(0)	3429177
321	32.8	12.7	5.0	chr6	78089126	78089407	(92716572)	+	MamGypLTR1d	LTR/Gypsy	37	343	(470)	3429549
22	27.3	1.1	4.4	chr6	78089408	78089496	(92716483)	+	G-rich	Low_complexity	1	90	(0)	3429550
258	36.5	6.0	4.5	chr6	78089502	78089814	(92716165)	+	MamGypLTR1d	LTR/Gypsy	307	624	(189)	3429549
407	26.9	4.9	0.6	chr6	79089412	79089568	(91716411)	C	L1MC4	LINE/L1	(190)	7852	7689	3430788
308	18.8	3.9	1.2	chr6	79089569	79090289	(91715690)	+	(CCTT)n	Simple_repeat	1	749	(0)	3430789
579	28.7	2.1	3.7	chr6	79090291	79090536	(91715443)	C	L1MC4	LINE/L1	(364)	7678	7437	3430788
1745	18.4	1.3	1.9	chr6	80168002	80168310	(90637669)	+	AluJb	SINE/Alu	5	311	(1)	3432301
30	30.0	6.9	0.0	chr6	80168311	80168469	(90637510)	+	GA-rich	Low_complexity	1	170	(0)	3432302
65	31.9	0.3	4.2	chr6	80168531	80168835	(90637144)	+	GA-rich	Low_complexity	1	306	(0)	3432302
53	25.1	0.7	2.6	chr6	81704749	81704901	(89101078)	+	G-rich	Low_complexity	1	154	(0)	3434128
282	24.2	5.9	5.9	chr6	82237459	82237559	(88568420)	C	MIR	SINE/MIR	(98)	164	64	3434840
90	8.2	0.0	1.5	chr6	82237575	82237707	(88568272)	+	(AGT)n	Simple_repeat	1	133	(0)	3434841
479	18.4	0.0	1.1	chr6	83831261	83831348	(86974631)	C	MER63B	DNA/hAT-Blackjack	(39)	397	311	3437031
18	34.5	0.0	1.4	chr6	83831403	83831474	(86974505)	+	GA-rich	Low_complexity	1	72	(0)	3437032
33	16.8	0.0	0.0	chr6	84352034	84352095	(86453884)	+	G-rich	Low_complexity	1	62	(0)	3437746
1512	20.2	6.9	1.5	chr6	84657031	84657211	(86148768)	+	MLT1A	LTR/ERVL-MaLR	1	189	(185)	3438104
59	5.6	2.7	0.0	chr6	84657212	84657286	(86148693)	+	(TC)n	Simple_repeat	1	77	(0)	3438105
1512	20.2	6.9	1.5	chr6	84657287	84657445	(86148534)	+	MLT1A	LTR/ERVL-MaLR	190	360	(14)	3438104
474	15.9	0.5	0.0	chr6	85738012	85738094	(85067885)	C	MLT1A	LTR/ERVL-MaLR	(10)	455	294	3439540
237	24.3	16.4	0.8	chr6	85738083	85738183	(85067796)	+	MER31A	LTR/ERV1	47	159	(307)	3439541
34	12.5	0.0	1.8	chr6	85738211	85738266	(85067713)	+	(GA)n	Simple_repeat	1	56	(0)	3439542
789	24.1	0.6	0.0	chr6	85738267	85738436	(85067543)	+	MLT1A	LTR/ERVL-MaLR	204	374	(0)	3439539
527	26.5	3.6	1.8	chr6	85738437	85738601	(85067378)	C	L1ME4b	LINE/L1	(238)	654	487	3439543
1608	13.9	0.0	0.4	chr6	86094473	86094710	(84711269)	+	L1PA10	LINE/L1	1	237	(5638)	3439895
13638	12.3	1.9	0.8	chr6	86094707	86098629	(84707350)	+	L1PA10	LINE/L1	738	4704	(1757)	3439895
1711	18.2	24.6	2.6	chr6	87461780	87462233	(83343746)	C	MER89	LTR/ERV1	(0)	559	6	3441589
3845	17.9	5.3	0.4	chr6	88040025	88040783	(82765196)	+	L1MD1	LINE/L1	5615	6412	(3)	3442615
34	22.5	5.8	0.9	chr6	88360771	88360873	(82445106)	+	(TC)n	Simple_repeat	1	109	(0)	3443032
19515	12.8	4.9	2.1	chr6	88951525	88954760	(81851219)	+	L1PB2	LINE/L1	136	3558	(3304)	3443841
336	18.4	12.6	0.0	chr6	89139504	89139579	(81666400)	C	MLT1B	LTR/ERVL-MaLR	(262)	128	42	3444264
797	18.4	0.7	0.0	chr6	89139583	89139718	(81666261)	+	AluJb	SINE/Alu	157	293	(19)	3444265
977	14.4	0.0	6.9	chr6	89140065	89140237	(81665742)	C	AluJo	SINE/Alu	(141)	171	11	3444266
901	16.3	5.6	0.5	chr6	90043198	90043382	(80762597)	+	MSTD	LTR/ERVL-MaLR	1	195	(201)	3445822
35	15.6	0.0	1.5	chr6	90043473	90043540	(80762439)	+	(TCCC)n	Simple_repeat	1	68	(0)	3445823
268	23.9	0.0	0.0	chr6	90043541	90043607	(80762372)	+	MSTD	LTR/ERVL-MaLR	391	457	(0)	3445822
597	33.4	10.9	1.8	chr6	90043608	90043988	(80761991)	+	L2b	LINE/L2	2941	3360	(15)	3445824
32	3.0	0.0	0.0	chr6	90296785	90296818	(80509161)	+	(GCT)n	Simple_repeat	1	34	(0)	3446171
23	21.4	3.8	2.2	chr6	90297035	90297105	(80508874)	+	G-rich	Low_complexity	1	72	(0)	3446172
368	31.5	13.4	1.8	chr6	91044955	91045125	(79760854)	+	MIR3	SINE/MIR	10	203	(5)	3447184
28	28.7	3.4	0.0	chr6	93295038	93295125	(77510854)	+	GA-rich	Low_complexity	1	91	(0)	3449909
36130	14.9	1.1	0.6	chr6	93661188	93664518	(77141461)	+	HERVL-int	LTR/ERVL	1	3360	(2294)	3450361
1880	15.5	14.2	1.3	chr6	93664519	93664695	(77141284)	C	MSTA	LTR/ERVL-MaLR	(0)	428	197	3450362
96	4.2	0.0	0.0	chr6	93664696	93664795	(77141184)	+	(GA)n	Simple_repeat	1	100	(0)	3450363
1880	15.5	14.2	1.3	chr6	93664796	93664989	(77140990)	C	MSTA	LTR/ERVL-MaLR	(232)	196	2	3450362
46	22.1	4.3	0.0	chr6	94822603	94822727	(75983252)	+	(AT)n	Simple_repeat	1	130	(0)	3451784
1605	22.8	2.1	2.4	chr6	95148466	95148842	(75657137)	+	MER67D	LTR/ERV1	137	512	(2)	3452103
202	29.8	20.3	0.7	chr6	95148962	95149103	(75656876)	C	MER5B	DNA/hAT-Charlie	(0)	178	2	3452106
654	23.4	6.3	3.5	chr6	97125397	97125595	(73680384)	C	MER67D	LTR/ERV1	(0)	514	310	3454570
295	15.3	0.0	4.8	chr6	97125636	97125697	(73680282)	C	MER67D	LTR/ERV1	(195)	319	261	3454570
32	27.8	3.2	2.2	chr6	98834564	98834680	(71971299)	+	GA-rich	Low_complexity	1	118	(0)	3456774
17	14.1	5.1	0.0	chr6	98834764	98834802	(71971177)	+	GA-rich	Low_complexity	1	41	(0)	3456775
45	10.7	0.0	0.0	chr6	98835074	98835143	(71970836)	+	(CGGCGG)n	Simple_repeat	1	70	(0)	3456776
56	8.4	0.0	0.0	chr6	98835245	98835321	(71970658)	+	(GCAGCA)n	Simple_repeat	1	77	(0)	3456777
89	31.1	1.0	1.4	chr6	99078392	99078685	(71727294)	+	G-rich	Low_complexity	1	297	(0)	3457079
58	39.8	2.0	1.3	chr6	102917851	102918153	(67887826)	+	(TCTT)n	Simple_repeat	1	309	(0)	3462119
19	13.8	6.0	1.9	chr6	102918110	102918159	(67887820)	+	(TTCTT)n	Simple_repeat	1	53	(0)	3462120
283	32.0	10.4	2.7	chr6	104533549	104533805	(66272174)	+	L2a	LINE/L2	2308	2586	(833)	3464089
54	5.8	6.7	0.0	chr6	104533818	104533907	(66272072)	+	(TC)n	Simple_repeat	1	96	(0)	3464090
35	4.5	2.2	0.0	chr6	104533908	104533953	(66272026)	+	(AC)n	Simple_repeat	1	47	(0)	3464091
13	23.8	2.2	2.1	chr6	104859847	104859892	(65946087)	+	(CCG)n	Simple_repeat	1	47	(0)	3464541
357	34.0	15.1	3.2	chr6	105990228	105990792	(64815187)	C	L2	LINE/L2	(429)	2990	2347	3466232
848	26.6	6.5	1.3	chr6	106251180	106251484	(64554495)	+	LTR41B	LTR/ERVL	399	720	(38)	3466616
48	29.5	3.2	0.0	chr6	106251634	106251789	(64554190)	+	GA-rich	Low_complexity	1	161	(0)	3466617
1006	20.7	0.9	2.2	chr6	106434579	106434805	(64371174)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	3466919
92	29.4	1.2	0.0	chr6	106589105	106589354	(64216625)	+	GA-rich	Low_complexity	1	253	(0)	3467166
2190	13.0	0.0	0.0	chr6	107952476	107952776	(62853203)	+	AluSx1	SINE/Alu	1	301	(11)	3469646
2189	10.5	0.0	0.3	chr6	107952977	107953271	(62852708)	+	AluSz	SINE/Alu	1	294	(18)	3469647
23	20.5	0.0	0.0	chr6	108118126	108118176	(62687803)	+	GA-rich	Low_complexity	1	51	(0)	3469988
13	20.8	0.0	0.0	chr6	108134183	108134215	(62671764)	+	(CCCTCC)n	Simple_repeat	1	33	(0)	3470017
2031	16.7	0.3	0.3	chr6	108395391	108395702	(62410277)	C	AluJb	SINE/Alu	(0)	312	1	3470564
45	19.6	0.0	0.0	chr6	108395762	108395851	(62410128)	+	GA-rich	Low_complexity	1	90	(0)	3470565
1654	16.1	3.4	0.0	chr6	108395880	108396017	(62409962)	C	AluJb	SINE/Alu	(48)	264	118	3470566
28	7.2	2.3	0.0	chr6	108396018	108396061	(62409918)	+	(TTTG)n	Simple_repeat	1	45	(0)	3470567
14	28.4	1.8	0.0	chr6	108558401	108558455	(62247524)	+	G-rich	Low_complexity	1	56	(0)	3470834
22	19.6	2.6	5.1	chr6	108862640	108862716	(61943263)	+	G-rich	Low_complexity	1	79	(0)	3471263
1649	18.2	15.0	0.3	chr6	109024553	109024904	(61781075)	C	MER47B	DNA/TcMar-Tigger	(0)	418	6	3471519
2081	29.0	12.9	3.6	chr6	109025030	109026344	(61779635)	+	L1MEd	LINE/L1	235	1688	(5398)	3471520
673	30.0	16.5	0.2	chr6	109688239	109688604	(61117375)	+	ERVL-B4-int	LTR/ERVL	4048	4630	(1037)	3472527
434	28.4	10.7	4.2	chr6	109688599	109688789	(61117190)	+	ERV3-16A3_I-int	LTR/ERVL	4504	4708	(518)	3472529
225	20.4	0.0	0.0	chr6	109688845	109688888	(61117091)	C	5S	rRNA	(77)	44	1	3472530
762	30.3	6.3	4.5	chr6	109688891	109689310	(61116669)	+	ERV3-16A3_I-int	LTR/ERVL	4830	5232	(435)	3472529
2601	13.0	12.6	5.2	chr6	110123955	110124191	(60681788)	+	MER61D	LTR/ERV1	1	297	(204)	3473186
86	0.0	3.6	0.0	chr6	110124192	110124275	(60681704)	+	(TC)n	Simple_repeat	1	87	(0)	3473187
2601	13.0	12.6	5.2	chr6	110124276	110124499	(60681480)	+	MER61D	LTR/ERV1	298	501	(0)	3473186
302	25.0	5.6	1.2	chr6	110530172	110530256	(60275723)	+	MER103C	DNA/hAT-Charlie	109	197	(100)	3473804
888	16.0	7.7	0.6	chr6	110980162	110980331	(59825648)	+	L1MB7	LINE/L1	5523	5705	(479)	3474764
1153	16.9	0.0	0.0	chr6	110980332	110980508	(59825471)	+	AluSz6	SINE/Alu	136	312	(0)	3474770
2315	14.1	4.6	5.0	chr6	110980519	110980576	(59825403)	+	L1MB7	LINE/L1	5700	5757	(427)	3474764
2003	13.4	1.0	0.3	chr6	110980577	110980866	(59825113)	+	AluSx	SINE/Alu	2	293	(19)	3474771
37	21.7	0.0	0.0	chr6	112254337	112254409	(58551570)	+	(CT)n	Simple_repeat	1	73	(0)	3476842
2174	10.8	5.2	2.2	chr6	112479799	112480167	(58325812)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3477176
106	18.7	1.9	0.0	chr6	112480205	112480417	(58325562)	+	(TCCT)n	Simple_repeat	1	217	(0)	3477177
30	19.9	2.0	1.9	chr6	113422750	113422855	(57383124)	+	(CT)n	Simple_repeat	1	106	(0)	3478454
76	22.1	2.2	3.4	chr6	113577948	113578068	(57227911)	+	(CCTT)n	Simple_repeat	1	120	(0)	3478689
2096	9.2	3.2	0.0	chr6	113578069	113578341	(57227638)	C	AluSq	SINE/Alu	(7)	306	25	3478690
1925	13.0	8.9	1.4	chr6	113930281	113930631	(56875348)	C	THE1D	LTR/ERVL-MaLR	(0)	381	2	3479366
37	8.4	3.5	6.7	chr6	113930632	113930683	(56875296)	+	(TTTC)n	Simple_repeat	1	52	(0)	3479367
3893	18.3	1.0	1.1	chr6	113930684	113930703	(56875276)	C	L1M3f	LINE/L1	(4609)	1956	1938	3479364
102	3.9	0.9	0.0	chr6	113930704	113930811	(56875168)	+	(TC)n	Simple_repeat	1	109	(0)	3479368
3893	18.3	1.0	1.1	chr6	113930812	113931497	(56874482)	C	L1M3f	LINE/L1	(4628)	1937	1251	3479364
14	15.3	2.6	2.6	chr6	113970813	113970850	(56835129)	+	(GCCCG)n	Simple_repeat	1	39	(0)	3479421
26	0.0	0.0	0.0	chr6	113970946	113970970	(56835009)	+	(CTG)n	Simple_repeat	1	25	(0)	3479422
843	27.7	6.8	1.3	chr6	114001889	114002206	(56803773)	+	MLT1M	LTR/ERVL-MaLR	4	340	(332)	3479485
13	16.8	0.0	5.4	chr6	114340949	114340985	(56464994)	+	(CCCA)n	Simple_repeat	1	37	(0)	3479976
70	14.8	2.3	0.0	chr6	114341136	114341265	(56464714)	+	GA-rich	Low_complexity	1	133	(0)	3479977
2637	6.5	0.0	0.3	chr6	115819016	115819325	(54986654)	+	AluY	SINE/Alu	1	309	(2)	3481767
474	24.9	9.5	7.9	chr6	115819326	115819459	(54986520)	+	MER67C	LTR/ERV1	389	513	(1)	3481766
543	32.4	6.9	8.9	chr6	115819505	115819931	(54986048)	+	LTR33	LTR/ERVL	98	515	(0)	3481768
2114	4.8	0.7	17.6	chr6	116681988	116682344	(54123635)	+	AluY	SINE/Alu	4	299	(12)	3482937
2028	13.5	2.5	3.3	chr6	117252354	117252713	(53553266)	+	THE1B	LTR/ERVL-MaLR	1	357	(7)	3483654
534	26.8	3.5	0.9	chr6	117252725	117252950	(53553029)	+	L1ME3D	LINE/L1	5776	6007	(235)	3483652
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
386	29.6	16.1	3.6	chr6	119364692	119365140	(51440839)	+	L2	LINE/L2	2470	2985	(434)	3486510
895	23.2	0.5	0.5	chr6	119365182	119365367	(51440612)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	189	3486516
40	17.8	0.0	0.0	chr6	119365391	119365467	(51440512)	+	GA-rich	Low_complexity	1	77	(0)	3486517
610	16.1	7.2	7.2	chr6	119365469	119365574	(51440405)	C	MLT1A	LTR/ERVL-MaLR	(223)	167	59	3486516
2486	9.5	4.4	1.4	chr6	119365575	119365925	(51440054)	C	THE1B	LTR/ERVL-MaLR	(0)	364	3	3486518
894	28.3	10.8	3.6	chr6	120076786	120077541	(50728438)	+	L1MEd	LINE/L1	890	1706	(5380)	3487386
349	34.5	5.6	2.9	chr6	120077564	120077772	(50728207)	C	L1MEd	LINE/L1	(6414)	689	475	3487384
8414	19.4	3.4	3.0	chr6	122084335	122086333	(48719646)	+	L1M4c	LINE/L1	1603	3576	(2800)	3489969
1085	22.1	5.1	2.2	chr6	122101816	122102138	(48703841)	+	L1MD1	LINE/L1	4620	4952	(1194)	3489989
3424	16.1	8.6	1.7	chr6	122102370	122102780	(48703199)	+	L1MD1	LINE/L1	4955	5395	(751)	3489989
1563	18.7	3.3	3.9	chr6	124378808	124379112	(46426867)	+	AluJr	SINE/Alu	1	303	(9)	3492916
367	24.6	6.7	2.3	chr6	124379407	124379535	(46426444)	+	LTR33A_	LTR/ERVL	397	531	(0)	3492917
422	26.8	0.5	8.1	chr6	124647662	124647872	(46158107)	+	HAL1	LINE/L1	1451	1645	(862)	3493262
251	24.5	4.3	2.2	chr6	124647943	124648051	(46157928)	C	MER31B	LTR/ERV1	(0)	543	395	3493268
2251	22.3	3.1	0.2	chr6	124648052	124648523	(46157456)	C	MER67D	LTR/ERV1	(28)	486	1	3493269
37	12.7	0.0	0.0	chr6	124976240	124976300	(45829679)	+	(TCCC)n	Simple_repeat	1	61	(0)	3493656
2096	12.4	0.0	0.0	chr6	124976301	124976567	(45829412)	C	AluSx3	SINE/Alu	(44)	267	1	3493657
826	29.1	5.7	6.2	chr6	124979451	124979907	(45826072)	C	L2b	LINE/L2	(251)	3124	2665	3493662
2805	10.9	3.3	0.7	chr6	125625545	125625961	(45180018)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3494602
356	31.7	8.4	4.7	chr6	125625962	125626051	(45179928)	+	L2	LINE/L2	2487	2577	(842)	3494600
5391	22.1	4.5	1.1	chr6	126408624	126411808	(44394171)	C	L1M2a	LINE/L1	(2638)	4924	1621	3495615
96	18.6	1.7	4.1	chr6	126411854	126412093	(44393886)	+	(TCCT)n	Simple_repeat	1	244	(0)	3495619
1045	22.8	0.5	0.5	chr6	126412094	126412286	(44393693)	C	AluJb	SINE/Alu	(118)	194	2	3495620
1975	19.4	5.5	5.2	chr6	126412288	126412885	(44393094)	C	L1M4b	LINE/L1	(4630)	2237	1638	3495621
347	25.8	0.0	2.2	chr6	126766802	126766892	(44039087)	+	MIRb	SINE/MIR	180	268	(0)	3496001
53	22.0	0.7	3.5	chr6	126767008	126767148	(44038831)	+	(CCTT)n	Simple_repeat	1	142	(0)	3496002
24	26.3	0.0	1.5	chr6	126821690	126821803	(43984176)	+	(TC)n	Simple_repeat	1	112	(0)	3496062
19	5.7	8.1	0.0	chr6	127340367	127340403	(43465576)	+	(TCTCTCC)n	Simple_repeat	1	40	(0)	3496757
14	33.6	1.5	0.0	chr6	127516059	127516125	(43289854)	+	(CCCCCT)n	Simple_repeat	1	68	(0)	3496999
21	6.8	0.0	0.0	chr6	127516372	127516402	(43289577)	+	(CTG)n	Simple_repeat	1	31	(0)	3497000
12	20.2	2.9	0.0	chr6	128495861	128495894	(42310085)	+	(CTGCA)n	Simple_repeat	1	35	(0)	3498228
127	19.8	0.8	1.1	chr6	128541271	128541537	(42264442)	+	(TCCT)n	Simple_repeat	1	269	(0)	3498301
2012	25.5	6.7	3.1	chr6	129090130	129090866	(41715113)	C	L1MC5	LINE/L1	(3)	9301	8537	3499010
284	15.4	1.5	9.7	chr6	129090915	129090986	(41714993)	C	L1MC5	LINE/L1	(2022)	7282	7217	3499011
351	29.5	3.7	2.1	chr6	130460708	130460894	(40345085)	+	L1ME3D	LINE/L1	6053	6242	(0)	3500939
36	19.8	2.4	0.0	chr6	130461011	130461093	(40344886)	+	(CTCT)n	Simple_repeat	1	85	(0)	3500940
2950	17.0	2.2	1.1	chr6	130666851	130667390	(40138589)	+	MER89	LTR/ERV1	13	558	(1)	3501224
15	28.6	0.0	1.8	chr6	130667414	130667470	(40138509)	+	(TTATTTT)n	Simple_repeat	1	57	(0)	3501225
476	29.2	9.0	5.9	chr6	131923394	131923768	(38882211)	C	MamGypLTR3a	LTR/Gypsy	(100)	881	494	3503110
2342	11.2	0.3	0.3	chr6	132739152	132739464	(38066515)	+	AluSp	SINE/Alu	1	313	(0)	3504237
3239	26.9	9.9	8.0	chr6	132739465	132739708	(38066271)	+	L2b	LINE/L2	2850	3081	(338)	3504234
15	18.7	0.0	0.0	chr6	132888883	132888914	(37917065)	+	(CAG)n	Simple_repeat	1	32	(0)	3504502
547	29.0	5.6	2.1	chr6	132888926	132889148	(37916831)	C	MIR	SINE/MIR	(31)	231	6	3504503
3548	13.8	2.8	1.2	chr6	133048565	133049159	(37756820)	+	Tigger3	DNA/TcMar-Tigger	2425	3029	(0)	3504725
86	19.8	0.6	0.0	chr6	133049236	133049407	(37756572)	+	(TCCC)n	Simple_repeat	1	173	(0)	3504726
1583	26.4	7.3	2.1	chr6	133295792	133296625	(37509354)	C	L2a	LINE/L2	(4)	3422	2540	3505057
15	13.7	0.0	0.0	chr6	133431941	133431964	(37374015)	+	(T)n	Simple_repeat	1	24	(0)	3505237
292	17.9	0.0	1.8	chr6	133764477	133764533	(37041446)	+	HAL1b	LINE/L1	2347	2402	(19)	3505672
28	27.7	2.2	1.1	chr6	133764553	133764642	(37041337)	+	GA-rich	Low_complexity	1	92	(0)	3505673
19	14.9	0.0	0.0	chr6	134318144	134318174	(36487805)	+	(T)n	Simple_repeat	1	31	(0)	3506659
1147	20.5	0.9	1.4	chr6	135227933	135228155	(35577824)	+	MER58A	DNA/hAT-Charlie	1	222	(2)	3508155
1418	13.4	8.3	5.2	chr6	135391259	135391525	(35414454)	C	MER1B	DNA/hAT-Charlie	(0)	339	64	3508407
1061	11.6	1.3	0.0	chr6	135391715	135391869	(35414110)	C	MER31A	LTR/ERV1	(0)	485	329	3508408
238	28.4	3.9	13.9	chr6	135391881	135392052	(35413927)	C	L2	LINE/L2	(831)	2588	2435	3508409
180	37.2	5.1	2.3	chr6	135760130	135760261	(35045718)	+	L2c	LINE/L2	3248	3383	(4)	3508920
1942	25.1	3.3	6.2	chr6	135760281	135760781	(35045198)	C	L1ME1	LINE/L1	(0)	6179	5677	3508921
30	0.0	2.2	6.4	chr6	135760782	135760827	(35045152)	+	(TTTTG)n	Simple_repeat	1	47	(0)	3508922
2182	10.0	0.0	2.8	chr6	135760831	135761120	(35044859)	C	AluSq	SINE/Alu	(31)	282	1	3508923
207	26.5	4.2	1.4	chr6	136769621	136769689	(34036290)	+	L2c	LINE/L2	3278	3348	(39)	3510422
73	1.4	0.0	1.4	chr6	136769723	136769796	(34036183)	+	(GAAG)n	Simple_repeat	1	74	(0)	3510423
63	15.7	0.6	6.3	chr6	136769797	136769953	(34036026)	+	GA-rich	Low_complexity	1	158	(0)	3510424
16	16.1	0.0	0.0	chr6	136770117	136770144	(34035835)	+	(T)n	Simple_repeat	1	28	(0)	3510425
11926	11.6	2.0	0.9	chr6	136831459	136833070	(33972909)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	3510555
2146	12.3	0.3	0.3	chr6	137679070	137679361	(33126618)	+	AluSq4	SINE/Alu	1	292	(19)	3511807
2692	25.5	9.6	8.9	chr6	137679362	137680163	(33125816)	+	L1MC4	LINE/L1	7013	7812	(230)	3511806
2002	16.0	1.6	0.0	chr6	138489485	138489790	(32316189)	+	AluJb	SINE/Alu	1	311	(1)	3513045
55	37.6	1.6	1.2	chr6	138489791	138490021	(32315958)	+	GA-rich	Low_complexity	16	248	(0)	3513046
16	24.1	1.7	3.4	chr6	138489986	138490043	(32315936)	+	A-rich	Low_complexity	1	59	(0)	3513047
285	20.4	10.2	2.2	chr6	138490064	138490153	(32315826)	+	L1ME3B	LINE/L1	6122	6219	(23)	3513048
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
2117	15.0	1.3	0.0	chr6	139018378	139018671	(31787308)	+	AluJo	SINE/Alu	1	298	(14)	3513962
21	12.2	0.0	0.0	chr6	139018831	139018866	(31787113)	+	(GGAG)n	Simple_repeat	1	36	(0)	3513963
37	17.4	1.5	0.0	chr6	139292048	139292115	(31513864)	+	(AC)n	Simple_repeat	1	69	(0)	3514417
48	28.0	1.8	2.9	chr6	139656004	139656174	(31149805)	+	(TCCC)n	Simple_repeat	1	174	(0)	3515023
14	15.7	5.5	5.2	chr6	139985364	139985418	(30820561)	+	A-rich	Low_complexity	1	58	(0)	3515508
67	26.1	1.6	4.4	chr6	139985457	139985491	(30820488)	+	(TTCC)n	Simple_repeat	1	35	(0)	3515509
27	6.0	0.0	0.0	chr6	139985492	139985526	(30820453)	+	(CCTT)n	Simple_repeat	1	35	(0)	3515510
67	26.1	1.6	4.4	chr6	139985527	139985735	(30820244)	+	(TTCC)n	Simple_repeat	4	205	(0)	3515511
1938	21.0	7.7	1.2	chr6	139985777	139986200	(30819779)	+	MLT2B1	LTR/ERVL	1	454	(66)	3515512
10830	13.1	1.1	0.2	chr6	140019768	140021383	(30784596)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3515572
314	27.6	12.9	3.3	chr6	140104997	140105206	(30700773)	C	L1MCa	LINE/L1	(1896)	4425	4193	3515670
15	8.7	0.0	0.0	chr6	140105293	140105317	(30700662)	+	(TCCC)n	Simple_repeat	1	25	(0)	3515671
27	7.1	2.1	2.1	chr6	140105320	140105366	(30700613)	+	(CTTC)n	Simple_repeat	1	48	(0)	3515672
951	13.8	1.8	3.0	chr6	140105519	140105683	(30700296)	C	L1MC1	LINE/L1	(0)	6333	6171	3515673
29	0.0	0.0	0.0	chr6	140376377	140376404	(30429575)	+	(CCAAA)n	Simple_repeat	1	28	(0)	3515980
92	21.9	3.5	2.2	chr6	140376407	140376665	(30429314)	+	(TTCC)n	Simple_repeat	1	268	(0)	3515981
23	29.3	1.0	4.0	chr6	140440136	140440233	(30365746)	+	(TTTC)n	Simple_repeat	1	99	(0)	3516040
5649	25.7	7.0	9.1	chr6	140882802	140883880	(29922099)	C	L1MD3	LINE/L1	(10)	8780	7700	3516600
28	9.8	0.0	0.0	chr6	140883881	140883924	(29922055)	+	(CCT)n	Simple_repeat	1	44	(0)	3516601
5649	25.7	7.0	9.1	chr6	140883925	140885233	(29920746)	C	L1MD3	LINE/L1	(1091)	7699	6445	3516600
42	12.8	3.8	1.2	chr6	141565005	141565084	(29240895)	+	GA-rich	Low_complexity	1	83	(0)	3517421
30	6.0	0.0	0.0	chr6	142944420	142944454	(27861525)	+	(CA)n	Simple_repeat	1	35	(0)	3519174
13	21.6	0.0	0.0	chr6	142944530	142944561	(27861418)	+	GA-rich	Low_complexity	1	32	(0)	3519175
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
13	18.2	2.6	2.5	chr6	144285043	144285081	(26520898)	+	G-rich	Low_complexity	1	40	(0)	3521175
14	5.0	0.0	0.0	chr6	144285621	144285641	(26520338)	+	(TCTT)n	Simple_repeat	1	21	(0)	3521176
276	14.3	5.4	5.4	chr6	145074746	145074819	(25731160)	C	LTR83	LTR/ERVL	(0)	780	707	3522265
212	20.4	1.1	1.5	chr6	145074821	145075280	(25730699)	+	GA-rich	Low_complexity	1	465	(0)	3522266
1287	30.7	11.7	1.2	chr6	145075281	145075926	(25730053)	C	L2b	LINE/L2	(263)	3112	2393	3522267
88	16.9	1.7	1.1	chr6	145238974	145239149	(25566830)	+	(TTCC)n	Simple_repeat	1	179	(0)	3522479
303	32.0	13.3	2.9	chr6	145520694	145520934	(25285045)	C	L2a	LINE/L2	(129)	3297	3028	3522870
2440	29.7	6.7	3.9	chr6	145520929	145521862	(25284117)	C	L2a	LINE/L2	(1579)	1840	879	3522870
1590	10.4	0.9	0.0	chr6	146799342	146799553	(24006426)	+	AluSc5	SINE/Alu	87	300	(9)	3524513
39	18.7	0.0	1.2	chr6	146799554	146799635	(24006344)	+	G-rich	Low_complexity	1	82	(0)	3524514
690	14.7	0.0	7.2	chr6	146799667	146799798	(24006181)	+	L1MC1	LINE/L1	6186	6308	(25)	3524515
2456	9.4	0.0	0.0	chr6	146799799	146800107	(24005872)	C	AluSg4	SINE/Alu	(1)	309	1	3524516
14	5.0	0.0	0.0	chr6	147204595	147204615	(23601364)	+	(GCA)n	Simple_repeat	1	21	(0)	3525092
14	12.5	0.0	0.0	chr6	147204785	147204810	(23601169)	+	(AAT)n	Simple_repeat	1	26	(0)	3525093
16	12.1	2.5	4.9	chr6	147341664	147341703	(23464276)	+	G-rich	Low_complexity	1	41	(0)	3525281
646	26.1	8.0	0.9	chr6	147341845	147342064	(23463915)	C	MIR	SINE/MIR	(25)	237	1	3525282
75	17.4	1.3	1.3	chr6	148075579	148075732	(22730247)	+	(CTCC)n	Simple_repeat	1	156	(0)	3526287
523	38.1	3.1	2.3	chr6	148075774	148076125	(22729854)	+	L2	LINE/L2	1833	2187	(1232)	3526288
245	33.1	3.6	3.0	chr6	148109757	148109921	(22696058)	C	LTR81B	LTR/Gypsy	(194)	1199	1034	3526331
12	31.5	2.1	6.3	chr6	148109958	148110050	(22695929)	+	(CTTC)n	Simple_repeat	1	95	(0)	3526332
1431	20.9	10.2	2.3	chr6	148870944	148871110	(21934869)	+	MLT1A	LTR/ERVL-MaLR	1	173	(201)	3527575
56	5.7	2.7	0.0	chr6	148871111	148871183	(21934796)	+	(TC)n	Simple_repeat	1	75	(0)	3527576
1431	20.9	10.2	2.3	chr6	148871184	148871358	(21934621)	+	MLT1A	LTR/ERVL-MaLR	174	373	(1)	3527575
208	29.0	4.6	0.0	chr6	148871359	148871420	(21934559)	+	L2b	LINE/L2	3304	3368	(7)	3527577
817	18.5	8.1	7.5	chr6	149202698	149203042	(21602937)	+	MER31B	LTR/ERV1	1	465	(1)	3528051
210	27.4	2.5	15.5	chr6	149353065	149353245	(21452734)	C	MER5A	DNA/hAT-Charlie	(3)	186	30	3528309
13	9.7	0.0	0.0	chr6	149353252	149353273	(21452706)	+	(TGC)n	Simple_repeat	1	22	(0)	3528310
384	27.9	0.7	8.7	chr6	149353307	149353455	(21452524)	C	L1ME4b	LINE/L1	(11)	881	745	3528311
202	24.4	0.0	0.0	chr6	149353456	149353496	(21452483)	+	MER5B	DNA/hAT-Charlie	137	177	(1)	3528312
2038	16.9	4.3	7.1	chr6	150354715	150355138	(20450841)	+	MER31B	LTR/ERV1	1	408	(58)	3530081
2961	13.6	6.4	0.8	chr6	150355139	150355636	(20450343)	+	LTR64	LTR/ERV1	1	528	(0)	3530082
3020	6.0	0.0	0.3	chr6	150360071	150360452	(20445527)	C	L1PA8	LINE/L1	(0)	6172	5792	3530092
189	23.7	0.0	0.0	chr6	150360671	150360708	(20445271)	C	MIRb	SINE/MIR	(13)	255	218	3530093
248	28.6	0.0	1.6	chr6	150360712	150360775	(20445204)	+	MLT1C	LTR/ERVL-MaLR	404	466	(1)	3530094
1988	14.5	0.0	0.3	chr6	150752835	150753124	(20052855)	+	AluJb	SINE/Alu	6	294	(18)	3530688
15	19.7	0.0	0.0	chr6	151390627	151390655	(19415324)	+	(GC)n	Simple_repeat	1	29	(0)	3531909
18	22.0	0.0	0.0	chr6	151390648	151390705	(19415274)	+	(AGC)n	Simple_repeat	1	58	(0)	3531910
18	6.8	0.0	5.7	chr6	151390752	151390786	(19415193)	+	(CCCTC)n	Simple_repeat	1	35	(0)	3531911
15	20.1	0.0	0.0	chr6	151390815	151390866	(19415113)	+	(GCA)n	Simple_repeat	1	52	(0)	3531912
23	25.1	2.6	1.3	chr6	151391001	151391077	(19414902)	+	(CCTC)n	Simple_repeat	1	79	(0)	3531913
24	21.4	3.0	1.4	chr6	151391468	151391582	(19414397)	+	(GCG)n	Simple_repeat	1	116	(0)	3531914
28	19.6	2.0	6.9	chr6	151391701	151391800	(19414179)	+	(GCC)n	Simple_repeat	1	102	(0)	3531915
346	25.8	3.0	1.0	chr6	151850297	151850394	(18955585)	+	MLT1C	LTR/ERVL-MaLR	137	236	(231)	3532716
52	9.4	6.5	0.0	chr6	151850395	151850486	(18955493)	+	GA-rich	Low_complexity	1	98	(0)	3532717
2301	11.2	0.0	0.3	chr6	153234159	153234454	(17571525)	+	AluSp	SINE/Alu	1	295	(18)	3534635
80	31.1	1.9	0.8	chr6	153234455	153234711	(17571268)	+	A-rich	Low_complexity	1	262	(0)	3534636
1538	23.1	10.8	4.8	chr6	153894037	153894514	(16911465)	+	MER67D	LTR/ERV1	1	510	(4)	3535524
428	33.6	2.0	3.9	chr6	153894515	153894560	(16911419)	+	MIR	SINE/MIR	220	262	(0)	3535523
16	0.0	0.0	0.0	chr6	154246936	154246952	(16559027)	+	(A)n	Simple_repeat	1	17	(0)	3536008
406	34.3	8.4	6.5	chr6	154491147	154491382	(16314597)	+	L2b	LINE/L2	3112	3367	(8)	3536486
2270	9.9	0.7	0.0	chr6	155174376	155174668	(15631311)	C	AluSx	SINE/Alu	(17)	295	1	3537770
26	13.8	5.3	0.0	chr6	155647811	155647867	(15158112)	+	(CTCT)n	Simple_repeat	1	60	(0)	3538399
642	29.5	12.2	1.8	chr6	155647928	155648155	(15157824)	+	MIRc	SINE/MIR	14	268	(0)	3538400
961	30.2	15.2	3.5	chr6	155765723	155766472	(15039507)	C	L4_C_Mam	LINE/RTE-X	(2739)	2399	1546	3538544
41	31.9	0.0	2.1	chr6	155766515	155766658	(15039321)	+	(TCCC)n	Simple_repeat	1	144	(0)	3538545
46	7.6	0.0	2.7	chr6	155766704	155766776	(15039203)	+	(TATATC)n	Simple_repeat	1	73	(0)	3538546
45	14.1	0.0	1.2	chr6	156778169	156778248	(14027731)	+	(CCA)n	Simple_repeat	1	80	(0)	3539995
49	3.9	0.0	0.0	chr6	156778269	156778321	(14027658)	+	(CAG)n	Simple_repeat	1	53	(0)	3539996
240	30.6	4.5	3.4	chr6	157436151	157436238	(13369741)	+	MIRc	SINE/MIR	68	156	(112)	3540908
193	31.0	1.4	1.4	chr6	157436277	157436348	(13369631)	+	MIRb	SINE/MIR	171	242	(26)	3540909
115	19.7	0.8	2.7	chr6	157522696	157522961	(13283018)	+	(TTCC)n	Simple_repeat	1	260	(0)	3541049
211	32.5	12.8	1.9	chr6	157806935	157807150	(12998829)	+	L2c	LINE/L2	2919	3161	(226)	3541509
1684	20.3	0.0	0.0	chr6	158222950	158223239	(12582740)	+	AluJr4	SINE/Alu	2	291	(21)	3542172
2058	10.2	2.3	4.8	chr6	158223241	158223553	(12582426)	C	AluSx1	SINE/Alu	(7)	305	1	3542173
3551	20.3	5.3	8.1	chr6	158876804	158877474	(11928505)	C	L1MCa	LINE/L1	(4703)	2048	1425	3543285
2318	9.1	0.0	3.1	chr6	158877475	158877792	(11928187)	C	AluSx1	SINE/Alu	(4)	308	1	3543292
17	13.2	0.0	2.9	chr6	159620663	159620697	(11185282)	+	(TTGG)n	Simple_repeat	1	35	(0)	3544319
14	4.0	7.7	0.0	chr6	159620771	159620796	(11185183)	+	(AAAC)n	Simple_repeat	1	28	(0)	3544320
28	29.5	2.7	2.6	chr6	159620895	159621007	(11184972)	+	GA-rich	Low_complexity	1	113	(0)	3544321
44	2.4	0.0	0.0	chr6	159621174	159621215	(11184764)	+	(GA)n	Simple_repeat	1	42	(0)	3544322
62	34.2	0.0	0.0	chr6	160218307	160218506	(10587473)	+	(CAG)n	Simple_repeat	1	200	(0)	3545195
201	19.6	3.8	5.6	chr6	160218508	160218561	(10587418)	+	OldhAT1	DNA/hAT-Ac	2005	2057	(791)	3545196
31	13.9	0.0	0.0	chr6	160218913	160218977	(10587002)	+	(CAG)n	Simple_repeat	1	65	(0)	3545197
219	29.7	5.1	5.1	chr6	162975851	162975967	(7830012)	C	L2c	LINE/L2	(5)	3382	3266	3548888
17	24.7	4.0	1.3	chr6	163525258	163525286	(7280693)	+	(TCTTCTT)n	Simple_repeat	1	30	(0)	3549581
35	3.9	7.5	0.0	chr6	163525287	163525339	(7280640)	+	(TC)n	Simple_repeat	1	57	(0)	3549582
17	24.7	4.0	1.3	chr6	163525340	163525362	(7280617)	+	(TCTTCTT)n	Simple_repeat	3	25	(0)	3549583
2129	11.6	0.7	3.0	chr6	163525363	163525664	(7280315)	C	AluSg	SINE/Alu	(15)	295	1	3549584
17	24.7	4.0	1.3	chr6	163525665	163525686	(7280293)	+	(TCTTCTT)n	Simple_repeat	5	27	(0)	3549585
184	23.2	0.0	8.2	chr6	165936452	165936512	(4869467)	C	OldhAT1	DNA/hAT-Ac	(2003)	845	790	3552567
1334	17.3	1.4	0.0	chr6	166132540	166132753	(4673226)	+	AluJb	SINE/Alu	87	303	(9)	3552829
83	18.5	0.5	4.5	chr6	166132754	166132950	(4673029)	+	G-rich	Low_complexity	1	198	(0)	3552830
12	14.1	3.0	2.9	chr6	166132939	166132971	(4673008)	+	A-rich	Low_complexity	1	34	(0)	3552831
1772	25.0	6.9	2.9	chr6	166132975	166133737	(4672242)	+	L1ME2	LINE/L1	5835	6624	(335)	3552827
14	14.0	0.0	5.7	chr6	166275821	166275855	(4530124)	+	(CGC)n	Simple_repeat	1	35	(0)	3553041
406	19.4	0.4	0.7	chr6	168256878	168257692	(2548287)	+	(TCTCTC)n	Simple_repeat	1	818	(0)	3555309
261	18.0	5.9	9.8	chr6	168864813	168864935	(1941044)	C	HERVFH19-int	LTR/ERV1	(7323)	396	279	3555895
25	6.5	0.0	0.0	chr6	168865126	168865158	(1940821)	+	(GT)n	Simple_repeat	1	33	(0)	3555896
238	31.6	6.9	0.0	chr6	168865256	168865350	(1940629)	C	L2c	LINE/L2	(0)	3387	3286	3555897
1622	23.6	13.3	2.6	chr6	168932916	168933372	(1872607)	C	MLT2B2	LTR/ERVL	(2)	513	1	3555969
208	28.3	0.7	0.0	chr6	170052425	170052970	(753009)	+	(CTCT)n	Simple_repeat	1	550	(0)	3557101
338	29.1	3.4	0.0	chr7	268601	268686	(159077287)	C	L2b	LINE/L2	(8)	3367	3279	3558120
1164	1.9	2.5	1.6	chr7	905360	906656	(158439317)	+	(GAAAGGA)n	Simple_repeat	1	1329	(0)	3559041
3934	23.0	3.5	1.2	chr7	941069	942266	(158403707)	+	L1M4	LINE/L1	3890	5115	(1031)	3559091
1982	15.5	0.0	0.3	chr7	943920	944216	(158401757)	C	AluJr	SINE/Alu	(16)	296	1	3559092
488	28.4	9.7	0.8	chr7	1276588	1276832	(158069141)	C	L1ME3	LINE/L1	(99)	6063	5795	3559609
153	11.5	5.9	2.1	chr7	1277039	1277359	(158068614)	+	(CCTC)n	Simple_repeat	1	340	(0)	3559610
1849	25.4	10.4	5.7	chr7	1337145	1337557	(158008416)	C	L1MEc	LINE/L1	(4910)	1505	1033	3559721
71	23.9	6.9	0.0	chr7	1337560	1337575	(158008398)	+	(TCTC)n	Simple_repeat	1	17	(0)	3559723
33	4.6	0.0	4.1	chr7	1337576	1337624	(158008349)	+	(TCCC)n	Simple_repeat	1	49	(0)	3559724
28	0.0	0.0	0.0	chr7	1337625	1337651	(158008322)	+	(TTCT)n	Simple_repeat	1	27	(0)	3559725
71	23.9	6.9	0.0	chr7	1337652	1337878	(158008095)	+	(TCTC)n	Simple_repeat	2	244	(0)	3559726
1827	20.1	2.6	0.0	chr7	1337879	1338181	(158007792)	C	AluJr4	SINE/Alu	(1)	311	1	3559727
152	20.4	2.9	1.8	chr7	1606572	1606946	(157739027)	+	(CCT)n	Simple_repeat	1	386	(0)	3560163
86	15.1	6.7	0.5	chr7	1607082	1607276	(157738697)	+	(CT)n	Simple_repeat	1	208	(0)	3560164
18	12.6	0.0	0.0	chr7	1607286	1607312	(157738661)	+	(CA)n	Simple_repeat	1	27	(0)	3560165
213	24.4	6.8	0.0	chr7	1642293	1642374	(157703599)	+	MIR3	SINE/MIR	42	129	(79)	3560234
99	6.8	0.0	0.0	chr7	1642685	1642807	(157703166)	+	(CCCT)n	Simple_repeat	1	123	(0)	3560235
43	19.6	2.0	1.0	chr7	1670094	1670194	(157675779)	+	GA-rich	Low_complexity	1	103	(0)	3560288
395	30.6	4.5	1.0	chr7	1695982	1696176	(157649797)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	173	3560326
23	7.2	0.0	0.0	chr7	1696177	1696206	(157649767)	+	(TG)n	Simple_repeat	1	30	(0)	3560327
1884	15.9	0.3	3.4	chr7	1696381	1696701	(157649272)	C	AluJr	SINE/Alu	(1)	311	1	3560328
1458	18.5	0.3	6.9	chr7	2555962	2556106	(156789867)	+	AluJb	SINE/Alu	7	133	(179)	3561629
161	27.7	2.0	1.6	chr7	2627187	2627677	(156718296)	+	GA-rich	Low_complexity	1	501	(0)	3561753
197	34.1	7.9	5.2	chr7	2627685	2627857	(156718116)	+	MIRb	SINE/MIR	52	229	(39)	3561754
105	24.4	4.7	1.9	chr7	3117499	3117842	(156228131)	+	GA-rich	Low_complexity	1	360	(0)	3562706
344	33.8	7.7	4.7	chr7	3278955	3279171	(156066802)	C	L2a	LINE/L2	(608)	2811	2576	3563035
167	23.8	2.8	0.9	chr7	3279177	3279609	(156066364)	+	GA-rich	Low_complexity	1	445	(0)	3563051
643	31.4	15.7	2.7	chr7	3412903	3413413	(155932560)	C	L2a	LINE/L2	(17)	3409	2821	3563254
31	5.5	0.0	0.0	chr7	3883681	3883718	(155462255)	+	(CCTC)n	Simple_repeat	1	38	(0)	3563956
238	33.5	7.2	2.4	chr7	3883777	3883987	(155461986)	+	L2	LINE/L2	2668	2889	(530)	3563957
399	31.4	2.9	0.6	chr7	4083322	4083491	(155262482)	C	L1MC5a	LINE/L1	(427)	2350	2177	3564223
38	0.0	0.0	0.0	chr7	4083525	4083559	(155262414)	+	(CCTC)n	Simple_repeat	1	35	(0)	3564226
112	24.9	0.7	1.7	chr7	4083573	4083862	(155262111)	+	(CCTC)n	Simple_repeat	1	292	(0)	3564226
989	27.9	9.4	14.3	chr7	4083893	4084657	(155261316)	C	L1MC5a	LINE/L1	(691)	2086	1328	3564223
724	30.6	6.7	6.0	chr7	4473005	4473418	(154872555)	C	HERVL40-int	LTR/ERVL	(2430)	3100	2684	3564893
348	31.1	2.5	1.6	chr7	4473427	4473547	(154872426)	+	HAL1ME	LINE/L1	1395	1516	(949)	3564894
107	11.9	8.1	0.0	chr7	4473550	4473770	(154872203)	+	GA-rich	Low_complexity	1	239	(0)	3564895
1025	10.6	10.1	0.0	chr7	4473772	4473913	(154872060)	+	AluSx	SINE/Alu	1	158	(154)	3564896
2449	8.8	0.0	0.3	chr7	4476579	4476885	(154869088)	+	AluSq2	SINE/Alu	3	308	(5)	3564904
57	14.7	8.5	0.7	chr7	4476890	4477030	(154868943)	+	GA-rich	Low_complexity	1	153	(0)	3564905
455	27.8	1.2	3.4	chr7	4477031	4477067	(154868906)	+	HAL1ME	LINE/L1	1478	1512	(953)	3564894
2282	12.7	0.0	0.0	chr7	4477068	4477375	(154868598)	+	AluSx1	SINE/Alu	5	312	(0)	3564906
433	17.8	4.1	5.6	chr7	4484168	4484292	(154861681)	C	LOR1a	LTR/ERV1	(338)	123	1	3564932
257	21.8	6.4	0.5	chr7	4484293	4485042	(154860931)	+	GA-rich	Low_complexity	1	798	(0)	3564933
448	31.5	4.9	4.5	chr7	4485145	4485387	(154860586)	+	LTR78	LTR/ERV1	923	1166	(138)	3564930
251	27.8	5.7	1.7	chr7	4807296	4807412	(154538561)	C	L1MEh	LINE/L1	(2044)	191	70	3565576
239	19.7	4.6	4.8	chr7	4807455	4808256	(154537717)	+	(CTCC)n	Simple_repeat	1	839	(0)	3565577
259	25.5	11.6	1.3	chr7	4808288	4808442	(154537531)	C	HAL1	LINE/L1	(1409)	1098	926	3565575
100	19.1	2.6	5.5	chr7	6093118	6093275	(153252698)	+	(CTTC)n	Simple_repeat	1	152	(0)	3568592
1931	15.7	1.4	0.3	chr7	6093276	6093569	(153252404)	C	AluSz	SINE/Alu	(2)	310	14	3568593
100	19.1	2.6	5.5	chr7	6093570	6093714	(153252259)	+	(CTTC)n	Simple_repeat	1	142	(0)	3568594
715	16.5	1.6	0.0	chr7	6389704	6389824	(152956149)	C	AluJr	SINE/Alu	(188)	124	2	3569261
376	19.8	13.3	0.0	chr7	6389825	6389915	(152956058)	C	L1M5	LINE/L1	(733)	5391	5287	3569262
69	21.2	1.7	2.8	chr7	6389923	6390098	(152955875)	+	(TTCC)n	Simple_repeat	1	179	(0)	3569263
409	16.2	11.1	0.0	chr7	6390101	6390180	(152955793)	C	FLAM_A	SINE/Alu	(10)	132	43	3569264
26	26.5	1.2	1.2	chr7	6621279	6621361	(152724612)	+	(GCAGCC)n	Simple_repeat	1	84	(0)	3569825
33	29.5	0.9	0.9	chr7	6621451	6621563	(152724410)	+	(CAGCAA)n	Simple_repeat	1	114	(0)	3569826
183	33.7	0.0	3.4	chr7	6621573	6621661	(152724312)	+	OldhAT1	DNA/hAT-Ac	1982	2067	(781)	3569827
34	31.3	0.0	0.0	chr7	6621662	6621768	(152724205)	+	(AGC)n	Simple_repeat	1	107	(0)	3569828
201	36.0	0.0	0.0	chr7	6621776	6621850	(152724123)	+	OldhAT1	DNA/hAT-Ac	1993	2067	(781)	3569829
67	3.1	0.0	0.0	chr7	6944439	6944504	(152401469)	+	(TC)n	Simple_repeat	1	66	(0)	3570444
2333	8.3	0.0	0.3	chr7	6944671	6944959	(152401014)	+	AluY	SINE/Alu	2	289	(22)	3570445
23	24.4	3.8	1.2	chr7	7970357	7970436	(151375537)	+	(TCCCTC)n	Simple_repeat	1	83	(0)	3571877
12	13.5	2.8	5.4	chr7	7970663	7970698	(151375275)	+	(TTTGT)n	Simple_repeat	1	37	(0)	3571878
675	16.1	3.7	11.4	chr7	7992362	7992536	(151353437)	C	L1M8	LINE/L1	(627)	1796	1636	3571910
3045	25.4	7.3	4.0	chr7	7992511	7993751	(151352222)	C	L1M8	LINE/L1	(4771)	1444	182	3571910
1076	20.0	1.0	0.5	chr7	8926883	8927077	(150418896)	C	AluJr4	SINE/Alu	(27)	285	90	3573092
907	20.1	1.2	0.0	chr7	9072975	9073133	(150272840)	C	AluJo	SINE/Alu	(15)	297	137	3573281
75	5.8	1.1	0.0	chr7	9073226	9073315	(150272658)	+	(CT)n	Simple_repeat	1	91	(0)	3573282
1411	23.3	0.0	3.1	chr7	9073318	9073609	(150272364)	C	AluJr	SINE/Alu	(29)	283	1	3573283
2306	21.0	5.5	2.4	chr7	9742636	9743129	(149602844)	+	MER67D	LTR/ERV1	1	510	(4)	3574107
1826	18.3	2.6	1.6	chr7	11185252	11185780	(148160193)	C	MER67B	LTR/ERV1	(202)	459	1	3575892
28	12.4	0.0	0.0	chr7	11831828	11831880	(147514093)	+	(AGC)n	Simple_repeat	1	53	(0)	3576680
20	27.5	0.0	0.0	chr7	11832113	11832184	(147513789)	+	(GCC)n	Simple_repeat	1	72	(0)	3576681
600	24.0	4.8	1.9	chr7	12025060	12025254	(147320719)	C	L1M5	LINE/L1	(3563)	2583	2386	3576913
1685	16.2	11.4	5.3	chr7	12025258	12025668	(147320305)	+	MER67D	LTR/ERV1	76	514	(0)	3576914
21	10.8	0.0	0.0	chr7	14288220	14288249	(145057724)	+	(T)n	Simple_repeat	1	30	(0)	3579830
19	11.7	0.0	0.0	chr7	14288250	14288277	(145057696)	+	(A)n	Simple_repeat	1	28	(0)	3579831
16	0.0	0.0	0.0	chr7	14288288	14288305	(145057668)	+	(T)n	Simple_repeat	1	18	(0)	3579832
383	13.6	1.6	2.8	chr7	15184233	15184964	(144161009)	+	GA-rich	Low_complexity	1	744	(0)	3580934
1365	20.5	6.2	5.1	chr7	15495604	15495819	(143850154)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	173	3581340
59	1.3	6.2	2.3	chr7	15495820	15495900	(143850073)	+	(CT)n	Simple_repeat	1	86	(0)	3581341
1365	20.5	6.2	5.1	chr7	15495901	15496053	(143849920)	C	MLT1A	LTR/ERVL-MaLR	(202)	172	1	3581340
446	27.1	17.5	1.4	chr7	16754844	16755053	(142590920)	C	MIRb	SINE/MIR	(14)	254	4	3582987
2949	11.9	2.0	4.0	chr7	18547535	18547806	(140798167)	C	Tigger1	DNA/TcMar-Tigger	(324)	2094	1830	3585476
57	0.0	0.0	0.0	chr7	18547807	18547857	(140798116)	+	(CCTT)n	Simple_repeat	1	51	(0)	3585478
52	8.8	0.0	0.0	chr7	18547859	18547932	(140798041)	+	(CCCT)n	Simple_repeat	1	74	(0)	3585479
3467	14.3	2.0	1.6	chr7	18547934	18548515	(140797458)	C	Tigger1	DNA/TcMar-Tigger	(1833)	585	1	3585480
19	22.3	0.0	0.0	chr7	18941141	18941178	(140404795)	+	(T)n	Simple_repeat	1	38	(0)	3585963
30	25.8	0.0	0.0	chr7	18941178	18941256	(140404717)	+	(TCCC)n	Simple_repeat	1	79	(0)	3585964
264	20.7	15.9	0.9	chr7	19877037	19877148	(139468825)	C	MLT1K	LTR/ERVL-MaLR	(64)	531	400	3587022
33	11.2	5.6	1.3	chr7	19877151	19877221	(139468752)	+	(CTCTCTC)n	Simple_repeat	1	75	(0)	3587023
2791	14.2	1.8	0.2	chr7	19877231	19877673	(139468300)	C	L1PB1	LINE/L1	(28)	6123	5674	3587024
79	18.7	3.6	3.9	chr7	20284500	20284722	(139061251)	+	(CTTT)n	Simple_repeat	1	231	(0)	3587555
46	35.6	5.0	1.0	chr7	20284723	20284770	(139061203)	+	(TCTC)n	Simple_repeat	37	293	(0)	3587554
590	22.1	7.0	3.9	chr7	22561902	22562080	(136783893)	+	MER5A	DNA/hAT-Charlie	3	187	(2)	3590848
25	22.1	3.2	3.1	chr7	22562163	22562215	(136783758)	+	(TCTCTT)n	Simple_repeat	1	53	(0)	3590849
39	8.0	0.0	0.0	chr7	22562216	22562269	(136783704)	+	(CCT)n	Simple_repeat	1	54	(0)	3590850
25	22.1	3.2	3.1	chr7	22562270	22562300	(136783673)	+	(TCTCTT)n	Simple_repeat	6	36	(0)	3590851
30	0.0	0.0	0.0	chr7	22562301	22562328	(136783645)	+	(CTCC)n	Simple_repeat	1	28	(0)	3590852
399	32.5	5.0	1.3	chr7	22562352	22562582	(136783391)	+	MIRb	SINE/MIR	3	242	(26)	3590853
2518	19.6	11.1	6.0	chr7	22586207	22586907	(136759066)	+	MER21C	LTR/ERVL	189	929	(9)	3590887
96	6.1	1.7	0.0	chr7	22587030	22587149	(136758824)	+	(TC)n	Simple_repeat	1	122	(0)	3590888
79	8.2	0.0	0.0	chr7	24774245	24774350	(134571623)	+	(CTCC)n	Simple_repeat	1	106	(0)	3594361
2278	10.3	0.0	0.0	chr7	24774540	24774830	(134571143)	C	AluSg	SINE/Alu	(19)	291	1	3594362
4413	8.5	8.1	0.3	chr7	24793781	24794264	(134551709)	C	Harlequin-int	LTR/ERV1	(3753)	1349	815	3594397
37	4.3	4.2	0.0	chr7	24794265	24794312	(134551661)	+	(TC)n	Simple_repeat	1	50	(0)	3594398
4602	16.9	5.7	8.8	chr7	24794313	24795350	(134550623)	C	Harlequin-int	LTR/ERV1	(5901)	995	1	3594397
2250	11.4	0.0	0.0	chr7	24962030	24962326	(134383647)	+	AluSq2	SINE/Alu	10	306	(7)	3594658
23	10.5	0.0	4.4	chr7	24962330	24962374	(134383599)	+	(AAGA)n	Simple_repeat	1	45	(0)	3594659
17	8.9	0.0	9.1	chr7	24962373	24962416	(134383557)	+	G-rich	Low_complexity	1	44	(0)	3594660
789	26.3	15.4	2.6	chr7	24962417	24962427	(134383546)	+	MLT1K	LTR/ERVL-MaLR	147	155	(440)	3594661
65	0.0	1.5	1.5	chr7	24962428	24962494	(134383479)	+	(GAGGAGAGAG)n	Simple_repeat	1	68	(0)	3594662
789	26.3	15.4	2.6	chr7	24962495	24962872	(134383101)	+	MLT1K	LTR/ERVL-MaLR	156	595	(0)	3594661
224	29.9	9.9	2.1	chr7	25173238	25173309	(134172664)	+	L3	LINE/CR1	3883	3962	(137)	3595054
55	23.4	0.0	0.0	chr7	25174178	25174295	(134171678)	+	(CT)n	Simple_repeat	1	118	(0)	3595056
102	22.2	2.8	2.7	chr7	25966526	25966815	(133379158)	+	GA-rich	Low_complexity	1	298	(0)	3596179
1282	26.0	13.1	7.4	chr7	25966821	25967322	(133378651)	+	MLT1F	LTR/ERVL-MaLR	11	545	(3)	3596180
34	0.0	0.0	0.0	chr7	26864056	26864084	(132481889)	+	(CA)n	Simple_repeat	1	29	(0)	3597641
330	28.9	6.4	5.0	chr7	27476274	27476473	(131869500)	+	L2c	LINE/L2	3140	3342	(45)	3598558
41	11.9	0.0	0.0	chr7	27476505	27476570	(131869403)	+	(AGGG)n	Simple_repeat	1	66	(0)	3598559
2332	21.3	12.4	7.8	chr7	28062152	28062870	(131283103)	+	LTR41B	LTR/ERVL	1	757	(1)	3599436
13	27.4	2.1	0.0	chr7	28647172	28647219	(130698754)	+	(GTGGCCA)n	Simple_repeat	1	49	(0)	3600363
258	15.0	0.0	0.0	chr7	28647703	28647742	(130698231)	+	MER3	DNA/hAT-Charlie	1	40	(169)	3600364
345	13.1	0.0	1.6	chr7	28647736	28647797	(130698176)	+	MER3	DNA/hAT-Charlie	99	159	(50)	3600365
16	22.5	3.7	6.0	chr7	28685950	28686030	(130659943)	+	(GAGAGC)n	Simple_repeat	1	84	(0)	3600424
12	22.7	2.3	2.3	chr7	28686205	28686247	(130659726)	+	(TTTTA)n	Simple_repeat	1	44	(0)	3600425
24	32.4	2.8	0.9	chr7	28686276	28686383	(130659590)	+	(TCC)n	Simple_repeat	1	111	(0)	3600426
17	5.0	0.0	0.0	chr7	28686474	28686523	(130659450)	+	(A)n	Simple_repeat	1	50	(0)	3600427
455	29.2	10.0	6.7	chr7	28733375	28733807	(130612166)	+	L2c	LINE/L2	2938	3386	(1)	3600504
6289	14.2	3.0	2.3	chr7	29056024	29056938	(130289035)	C	L1MC1	LINE/L1	(6)	6502	5571	3600966
33	29.9	3.4	2.6	chr7	29487627	29487774	(129858199)	+	(TTCC)n	Simple_repeat	1	153	(0)	3601696
502	16.5	12.0	0.0	chr7	29487780	29487882	(129858091)	+	MER20	DNA/hAT-Charlie	100	216	(3)	3601697
20	13.9	0.0	0.0	chr7	29675279	29675310	(129670663)	+	(CA)n	Simple_repeat	1	32	(0)	3601952
41	8.0	0.0	0.0	chr7	29675311	29675363	(129670610)	+	(CT)n	Simple_repeat	1	53	(0)	3601953
92	1.1	2.2	0.0	chr7	30520838	30520927	(128825046)	+	(GA)n	Simple_repeat	1	92	(0)	3603253
13	20.3	1.9	7.3	chr7	32130387	32130440	(127215533)	+	(TCCT)n	Simple_repeat	1	55	(0)	3605676
34	11.9	0.0	0.0	chr7	32738446	32738500	(126607473)	+	(GAGA)n	Simple_repeat	1	55	(0)	3606690
26	11.2	0.0	0.0	chr7	32738500	32738538	(126607435)	+	(GT)n	Simple_repeat	1	39	(0)	3606691
2036	8.0	0.7	3.5	chr7	32798027	32798312	(126547661)	C	AluSx3	SINE/Alu	(33)	278	1	3606789
1716	13.9	7.3	7.8	chr7	32798313	32798463	(126547510)	+	THE1D	LTR/ERVL-MaLR	46	214	(167)	3606788
37	3.5	8.6	0.0	chr7	32798464	32798521	(126547452)	+	(CT)n	Simple_repeat	1	63	(0)	3606790
1716	13.9	7.3	7.8	chr7	32798522	32798688	(126547285)	+	THE1D	LTR/ERVL-MaLR	215	381	(0)	3606788
2979	22.1	10.2	5.8	chr7	32798689	32799060	(126546913)	+	L1MC5	LINE/L1	3912	4314	(1832)	3606787
14	21.7	4.0	1.9	chr7	32942604	32942653	(126403320)	+	(GCCGCG)n	Simple_repeat	1	52	(0)	3607043
743	22.0	0.0	0.0	chr7	33895124	33895255	(125450718)	+	AluJr	SINE/Alu	135	266	(46)	3608559
58	0.0	0.0	0.0	chr7	35838237	35838302	(123507671)	+	(CTTC)n	Simple_repeat	1	66	(0)	3611297
96	0.0	1.1	0.0	chr7	35838303	35838390	(123507583)	+	(TCCC)n	Simple_repeat	1	89	(0)	3611298
1780	16.6	0.0	3.5	chr7	35838391	35838679	(123507294)	C	AluJb	SINE/Alu	(33)	279	1	3611299
1674	16.8	5.2	0.4	chr7	38095523	38095796	(121250177)	+	AluJr	SINE/Alu	1	288	(24)	3614638
28	19.6	5.8	3.7	chr7	38095798	38095900	(121250073)	+	G-rich	Low_complexity	1	109	(0)	3614639
1199	20.9	9.0	6.1	chr7	38095908	38096424	(121249549)	+	L1MA9	LINE/L1	7212	7741	(12)	3614633
44	31.7	3.0	1.6	chr7	38362120	38362265	(120983708)	+	GA-rich	Low_complexity	1	196	(26)	3615031
15	19.0	0.0	7.3	chr7	38362266	38362320	(120983653)	+	A-rich	Low_complexity	1	55	(0)	3615032
44	31.7	3.0	1.6	chr7	38362321	38362338	(120983635)	+	GA-rich	Low_complexity	197	222	(0)	3615031
1733	22.4	7.4	2.5	chr7	38406469	38406700	(120939273)	+	MLT2B3	LTR/ERVL	1	238	(316)	3615094
65	4.1	2.6	0.0	chr7	38406701	38406776	(120939197)	+	(TC)n	Simple_repeat	1	78	(0)	3615095
1733	22.4	7.3	2.5	chr7	38406777	38407021	(120938952)	+	MLT2B3	LTR/ERVL	239	501	(60)	3615094
33	0.0	0.0	0.0	chr7	38407022	38407049	(120938924)	+	(CT)n	Simple_repeat	1	28	(0)	3615096
41	14.3	3.9	0.0	chr7	39085708	39085797	(120260176)	+	GA-rich	Low_complexity	1	93	(0)	3616052
21	26.3	0.0	0.0	chr7	41700444	41700494	(117645479)	+	(TT)n	Simple_repeat	1	51	(0)	3620214
109	21.2	2.0	0.4	chr7	41700634	41700881	(117645092)	+	GA-rich	Low_complexity	1	253	(0)	3620215
1760	19.3	0.0	0.7	chr7	41793303	41793577	(117552396)	+	AluJr	SINE/Alu	7	279	(33)	3620347
29	41.3	0.7	0.7	chr7	41793589	41793729	(117552244)	+	GA-rich	Low_complexity	1	142	(0)	3620348
17	21.1	0.0	0.0	chr7	42889234	42889267	(116456706)	+	A-rich	Low_complexity	1	34	(0)	3621809
374	16.3	5.2	1.1	chr7	42889328	42889420	(116456553)	+	MER107	DNA/hAT-Charlie	68	164	(36)	3621810
1501	16.4	4.0	0.4	chr7	43247366	43247628	(116098345)	+	AluJr	SINE/Alu	1	273	(39)	3622338
119	33.4	2.7	2.6	chr7	43247636	43248161	(116097812)	+	A-rich	Low_complexity	1	540	(0)	3622339
109	16.7	2.0	0.0	chr7	43691277	43691480	(115654493)	+	A-rich	Low_complexity	1	208	(0)	3623000
1061	32.1	2.7	2.5	chr7	43691641	43692081	(115653892)	+	L1M3a	LINE/L1	11	452	(5503)	3623001
68	15.1	1.5	1.5	chr7	45132521	45132652	(114213321)	+	G-rich	Low_complexity	1	134	(0)	3625539
210	41.0	2.4	0.6	chr7	45132666	45132827	(114213146)	+	L2	LINE/L2	2756	2920	(499)	3625540
43	28.4	3.6	0.0	chr7	47259776	47259915	(112086058)	+	(TCTC)n	Simple_repeat	1	145	(0)	3628306
233	17.2	0.0	12.1	chr7	47259920	47260018	(112085955)	+	SVA_A	Retroposon/SVA	1	87	(1300)	3628307
256	16.3	9.6	0.0	chr7	47259969	47260023	(112085950)	C	AluY	SINE/Alu	(5)	296	249	3628308
71	32.9	4.9	0.5	chr7	47589919	47590132	(111755841)	+	(CTCT)n	Simple_repeat	1	226	(0)	3628719
30	2.8	5.4	0.0	chr7	47590133	47590169	(111755804)	+	(TC)n	Simple_repeat	1	39	(0)	3628720
71	32.9	4.9	0.5	chr7	47590170	47590324	(111755649)	+	(CTCT)n	Simple_repeat	3	161	(0)	3628721
2316	11.9	0.6	0.0	chr7	47590396	47590706	(111755267)	+	AluSq2	SINE/Alu	1	313	(0)	3628722
5256	12.2	1.4	3.1	chr7	47621722	47622564	(111723409)	C	LTR1A2	LTR/ERV1	(8)	829	1	3628780
57	34.5	1.5	2.5	chr7	47622677	47622946	(111723027)	+	(TCCC)n	Simple_repeat	1	274	(0)	3628781
15	13.2	4.4	4.3	chr7	47622912	47622956	(111723017)	+	(TCTCTA)n	Simple_repeat	1	47	(0)	3628782
55	25.5	4.7	2.3	chr7	48046197	48046411	(111299562)	+	G-rich	Low_complexity	1	220	(0)	3629403
186	25.0	0.0	0.0	chr7	50713122	50713161	(108632812)	+	MIR	SINE/MIR	78	117	(145)	3632686
49	1.6	7.8	0.0	chr7	51435436	51435499	(107910474)	+	(TC)n	Simple_repeat	1	69	(0)	3633691
373	26.7	6.5	2.5	chr7	51435520	51435638	(107910335)	+	MIRb	SINE/MIR	36	159	(109)	3633692
41	2.5	0.0	0.0	chr7	53057844	53057883	(106288090)	+	(TC)n	Simple_repeat	1	40	(0)	3635714
13	21.5	3.1	7.5	chr7	53057888	53057952	(106288021)	+	(CTTC)n	Simple_repeat	1	67	(0)	3635715
197	26.1	2.6	2.2	chr7	53131661	53132273	(106213700)	+	(CTTC)n	Simple_repeat	1	629	(0)	3635832
173	25.5	1.9	0.8	chr7	54722465	54722936	(104623037)	+	(TC)n	Simple_repeat	1	481	(0)	3637710
48	23.9	1.9	3.8	chr7	55931531	55931684	(103414289)	+	(CCTT)n	Simple_repeat	1	157	(0)	3639528
2096	14.8	0.7	0.0	chr7	57232543	57232845	(102113128)	+	AluSx	SINE/Alu	1	305	(7)	3641999
30	0.0	0.0	0.0	chr7	57232869	57232894	(102113079)	+	(GA)n	Simple_repeat	1	26	(0)	3642000
347	18.2	0.0	0.0	chr7	57495188	57495242	(101850731)	+	AluYj4	SINE/Alu	225	279	(32)	3642545
367	17.7	3.1	0.0	chr7	57495408	57495469	(101850504)	+	AluYj4	SINE/Alu	226	289	(22)	3642546
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
1729	10.7	0.8	3.2	chr7	63230557	63230809	(96115164)	+	AluSx3	SINE/Alu	65	311	(0)	3644300
73	23.6	0.6	0.0	chr7	63230810	63230972	(96115001)	+	GA-rich	Low_complexity	1	164	(0)	3644301
4218	15.7	3.6	5.5	chr7	64671626	64671770	(94674203)	C	L1PA15	LINE/L1	(0)	6165	6018	3646572
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
84	11.5	0.0	0.0	chr7	65489745	65489886	(93856087)	+	(CCATT)n	Simple_repeat	1	142	(0)	3647902
383	14.3	3.1	0.0	chr7	65489887	65489949	(93856024)	C	AluYj4	SINE/Alu	(22)	289	225	3647903
85	11.3	0.7	0.6	chr7	65489965	65490119	(93855854)	+	(TTCCA)n	Simple_repeat	1	156	(0)	3647904
48	19.0	0.9	2.6	chr7	65490120	65490168	(93855805)	+	(CTCCA)n	Simple_repeat	1	48	(0)	3647905
440	7.8	6.3	0.4	chr7	66098890	66099632	(93246341)	+	(AGG)n	Simple_repeat	1	790	(0)	3649224
22	11.9	0.0	0.0	chr7	66099714	66099750	(93246223)	+	(AGG)n	Simple_repeat	1	37	(0)	3649225
19	10.5	0.0	0.0	chr7	66099784	66099814	(93246159)	+	(AGG)n	Simple_repeat	1	31	(0)	3649225
30	0.0	0.0	0.0	chr7	66100213	66100240	(93245733)	+	(AGG)n	Simple_repeat	1	28	(0)	3649226
12	5.6	0.0	0.0	chr7	66100275	66100293	(93245680)	+	(AGG)n	Simple_repeat	1	19	(0)	3649226
20	5.3	10.0	0.0	chr7	66100325	66100364	(93245609)	+	GA-rich	Low_complexity	1	44	(0)	3649227
1294	17.3	7.4	3.2	chr7	66100374	66100656	(93245317)	+	AluSc8	SINE/Alu	2	297	(14)	3649228
137	24.2	2.3	0.8	chr7	67636667	67637018	(91708955)	+	(TTCC)n	Simple_repeat	1	360	(0)	3652674
336	24.7	3.6	0.3	chr7	68954635	68955546	(90390427)	+	GA-rich	Low_complexity	1	945	(0)	3655606
215	27.2	1.7	0.8	chr7	69134434	69135024	(90210949)	+	(CT)n	Simple_repeat	1	601	(0)	3655990
287	21.9	16.2	5.8	chr7	69135043	69135250	(90210723)	+	HAL1b	LINE/L1	570	803	(1618)	3655989
12	19.0	5.4	0.0	chr7	70362287	70362323	(88983650)	+	(CTTCC)n	Simple_repeat	1	39	(0)	3658202
33	21.3	2.5	0.0	chr7	70362600	70362678	(88983295)	+	(CCTC)n	Simple_repeat	1	81	(0)	3658203
1538	17.2	7.2	0.7	chr7	70871534	70871806	(88474167)	+	AluJo	SINE/Alu	1	292	(20)	3658985
47	33.1	1.9	0.0	chr7	70871807	70871965	(88474008)	+	GA-rich	Low_complexity	1	162	(0)	3658986
310	24.3	2.7	2.7	chr7	70871986	70872059	(88473914)	+	AluJr	SINE/Alu	227	300	(12)	3658987
135	20.7	0.4	0.7	chr7	70872060	70872336	(88473637)	+	GA-rich	Low_complexity	1	278	(0)	3658988
273	32.1	9.1	6.1	chr7	71679430	71679630	(87666343)	C	L2c	LINE/L2	(0)	3426	3185	3660718
366	26.7	3.7	0.0	chr7	71679753	71679857	(87666116)	C	MER5A	DNA/hAT-Charlie	(18)	171	63	3660719
517	19.6	0.6	0.3	chr7	71679887	71680880	(87665093)	+	(TCCC)n	Simple_repeat	1	1000	(0)	3660720
229	17.0	5.9	0.0	chr7	71711476	71711999	(87633974)	+	(CT)n	Simple_repeat	1	555	(0)	3660778
77	21.4	3.9	2.9	chr7	71732891	71733121	(87612852)	+	GA-rich	Low_complexity	1	240	(0)	3660826
220	23.9	2.5	2.6	chr7	72106429	72107062	(87238911)	+	GA-rich	Low_complexity	1	650	(0)	3661626
2759	16.7	18.0	11.7	chr7	72386836	72387753	(86958220)	+	L1MC3	LINE/L1	6556	7527	(258)	3662212
4461	20.1	3.8	7.2	chr7	73339913	73340246	(86005727)	C	L1MB8	LINE/L1	(1490)	4656	4316	3664387
1454	9.3	17.7	0.4	chr7	73340247	73340493	(86005480)	+	AluSc	SINE/Alu	1	299	(10)	3664391
1524	23.8	9.9	3.7	chr7	73631315	73631541	(85714432)	+	L1ME3A	LINE/L1	5796	6026	(147)	3665093
30	0.0	0.0	0.0	chr7	73631559	73631586	(85714387)	+	(T)n	Simple_repeat	1	28	(0)	3665095
755	17.9	0.8	0.0	chr7	73631590	73631706	(85714267)	C	AluJr	SINE/Alu	(194)	118	1	3665096
45	32.2	2.2	5.7	chr7	73631715	73631938	(85714035)	+	(TTCCT)n	Simple_repeat	1	262	(18)	3665097
17	24.6	0.0	0.0	chr7	73631939	73631974	(85713999)	+	(T)n	Simple_repeat	1	36	(0)	3665098
45	32.2	2.2	5.7	chr7	73631975	73631988	(85713985)	+	(TTCCT)n	Simple_repeat	263	280	(0)	3665097
1639	16.3	4.3	8.0	chr7	73631989	73632301	(85713672)	C	AluJo	SINE/Alu	(11)	301	1	3665099
459	18.5	4.0	0.6	chr7	73648321	73649365	(85696608)	+	(CT)n	Simple_repeat	1	1087	(0)	3665149
12	13.6	2.8	5.4	chr7	73835005	73835040	(85510933)	+	GA-rich	Low_complexity	1	37	(0)	3665592
40	6.5	2.9	2.8	chr7	73835121	73835189	(85510784)	+	(CTCTCC)n	Simple_repeat	1	71	(0)	3665593
2325	11.8	0.0	0.6	chr7	73849830	73850142	(85495831)	+	AluSz6	SINE/Alu	2	312	(0)	3665628
223	29.3	47.9	0.0	chr7	73850229	73850415	(85495558)	+	L2b	LINE/L2	2788	3067	(308)	3665627
729	13.8	0.0	3.7	chr7	73850417	73850525	(85495448)	C	AluJb	SINE/Alu	(116)	196	92	3665629
106	45.8	2.6	0.1	chr7	74203863	74204546	(85141427)	+	GA-rich	Low_complexity	1	702	(0)	3666463
1034	21.3	2.1	0.8	chr7	74204547	74204783	(85141190)	+	ERVL47-int	LTR/ERVL	1220	1459	(3787)	3666464
86	29.7	3.2	0.3	chr7	74371508	74371787	(84974186)	+	GA-rich	Low_complexity	1	289	(0)	3666909
224	24.2	4.4	1.0	chr7	76280745	76281432	(83064541)	+	(CT)n	Simple_repeat	1	718	(0)	3671774
391	20.7	10.6	0.9	chr7	77808358	77808523	(81537450)	C	L1MEc	LINE/L1	(5362)	1053	779	3674523
1277	23.9	7.5	1.6	chr7	77808540	77808981	(81536992)	C	L1MEc	LINE/L1	(5907)	493	24	3674523
84	22.1	1.4	2.7	chr7	77983321	77983538	(81362435)	+	(CTTC)n	Simple_repeat	1	221	(0)	3674819
1547	17.9	4.2	6.9	chr7	77983545	77983862	(81362111)	C	AluJb	SINE/Alu	(3)	309	1	3674820
21	9.5	0.0	0.0	chr7	78020089	78020122	(81325851)	+	(CCACCC)n	Simple_repeat	1	34	(0)	3674884
32	9.7	1.7	1.7	chr7	78771117	78771174	(80574799)	+	(TC)n	Simple_repeat	1	59	(0)	3675902
1079	22.9	13.8	2.1	chr7	79493465	79493612	(79852361)	+	MLT1A	LTR/ERVL-MaLR	5	188	(186)	3676847
60	4.7	5.5	1.0	chr7	79493613	79493703	(79852270)	+	(TC)n	Simple_repeat	1	96	(0)	3676848
1079	22.9	13.8	2.1	chr7	79493704	79493880	(79852093)	+	MLT1A	LTR/ERVL-MaLR	189	374	(0)	3676847
1304	23.9	5.2	1.6	chr7	80014124	80014497	(79331476)	C	L1M2	LINE/L1	(4160)	3406	3019	3677539
1563	22.7	2.9	0.3	chr7	80014498	80014829	(79331144)	C	MSTB2	LTR/ERVL-MaLR	(116)	341	1	3677542
18	3.7	3.6	0.0	chr7	80707962	80707989	(78637984)	+	(ATAA)n	Simple_repeat	1	29	(0)	3678537
210	34.5	9.6	0.0	chr7	80708182	80708294	(78637679)	C	L2a	LINE/L2	(1431)	1988	1864	3678530
21	10.8	0.0	0.0	chr7	80737847	80737876	(78608097)	+	(A)n	Simple_repeat	1	30	(0)	3678565
603	30.5	4.2	1.0	chr7	80844426	80844630	(78501343)	+	MIR	SINE/MIR	50	261	(1)	3678705
324	35.1	0.6	3.8	chr7	80844629	80844788	(78501185)	C	MIRc	SINE/MIR	(111)	157	3	3678706
50	28.0	2.5	1.2	chr7	80905193	80905354	(78440619)	+	GA-rich	Low_complexity	1	166	(0)	3678786
14	18.9	2.8	0.0	chr7	80905435	80905470	(78440503)	+	(AGTC)n	Simple_repeat	1	37	(0)	3678787
61	0.0	0.0	0.0	chr7	82393032	82393086	(76952887)	+	(AGGA)n	Simple_repeat	1	55	(0)	3680824
54	14.2	0.0	0.0	chr7	82393087	82393178	(76952795)	+	(AGGC)n	Simple_repeat	3	94	(0)	3680825
56	12.9	0.0	8.5	chr7	83032373	83032513	(76313460)	+	(TCCC)n	Simple_repeat	1	141	(0)	3681715
239	33.6	0.9	2.6	chr7	83032662	83032774	(76313199)	+	L2c	LINE/L2	2493	2603	(816)	3681716
180	38.1	17.1	1.0	chr7	83878370	83878658	(75467315)	+	MamRTE1	LINE/RTE-BovB	3384	3728	(84)	3682878
304	24.7	0.0	6.1	chr7	85952976	85953057	(73392916)	C	Charlie15a	DNA/hAT-Charlie	(38)	186	110	3685401
19	19.1	2.9	5.6	chr7	85953116	85953184	(73392789)	+	(TTCTCC)n	Simple_repeat	1	71	(0)	3685402
1346	24.2	5.6	4.2	chr7	86318739	86319162	(73026811)	C	MLT1G1	LTR/ERVL-MaLR	(14)	565	81	3685811
38	14.9	2.9	0.0	chr7	86319287	86319355	(73026618)	+	GA-rich	Low_complexity	1	71	(0)	3685812
1679	17.8	0.7	1.1	chr7	87589504	87589778	(71756195)	+	AluJb	SINE/Alu	2	275	(37)	3687407
71	12.5	1.6	2.3	chr7	87589786	87589913	(71756060)	+	GA-rich	Low_complexity	1	130	(0)	3687408
15	13.7	3.1	0.0	chr7	87590068	87590099	(71755874)	+	(ATTC)n	Simple_repeat	1	33	(0)	3687409
636	20.5	2.4	2.9	chr7	88068911	88069146	(71276827)	+	MSTD	LTR/ERVL-MaLR	2	239	(157)	3688048
19	14.1	8.6	1.6	chr7	88069147	88069204	(71276769)	+	(CTCTCCT)n	Simple_repeat	1	63	(0)	3688049
1097	18.5	5.2	0.5	chr7	88069213	88069435	(71276538)	+	MSTD	LTR/ERVL-MaLR	195	432	(0)	3688048
410	25.8	13.3	1.6	chr7	88069436	88069555	(71276418)	C	MLT1H1	LTR/ERVL-MaLR	(418)	137	1	3688050
1302	20.8	1.4	14.3	chr7	90077667	90077853	(69268120)	+	MLT1A	LTR/ERVL-MaLR	4	172	(202)	3690582
50	2.2	0.0	0.0	chr7	90077854	90077900	(69268073)	+	(CT)n	Simple_repeat	1	47	(0)	3690583
1302	20.8	1.4	14.3	chr7	90077901	90078139	(69267834)	+	MLT1A	LTR/ERVL-MaLR	173	374	(0)	3690582
64	35.0	1.3	2.9	chr7	93717554	93717855	(65628118)	+	GA-rich	Low_complexity	1	306	(0)	3695630
260	28.8	2.7	0.0	chr7	93717918	93717990	(65627983)	C	MER63A	DNA/hAT-Blackjack	(135)	75	1	3695631
213	27.0	3.9	1.3	chr7	93717995	93718069	(65627904)	+	MIRc	SINE/MIR	104	180	(88)	3695632
79	20.6	1.2	0.2	chr7	93948874	93949043	(65396930)	+	GA-rich	Low_complexity	1	171	(0)	3695934
22	3.9	0.0	0.0	chr7	97005841	97005867	(62340106)	+	(T)n	Simple_repeat	1	27	(0)	3700153
51	5.4	0.0	0.0	chr7	97006052	97006110	(62339863)	+	(GCA)n	Simple_repeat	1	59	(0)	3700154
25	3.1	0.0	0.0	chr7	97006111	97006143	(62339830)	+	(CGC)n	Simple_repeat	1	33	(0)	3700155
16	4.3	0.0	3.9	chr7	97006204	97006229	(62339744)	+	(CGG)n	Simple_repeat	1	26	(0)	3700156
31	3.1	0.0	0.0	chr7	97006233	97006265	(62339708)	+	(CAC)n	Simple_repeat	1	33	(0)	3700157
250	25.6	10.0	2.2	chr7	97420604	97420695	(61925278)	C	MIRc	SINE/MIR	(5)	263	164	3700767
19	4.3	0.0	0.0	chr7	97420715	97420738	(61925235)	+	(TG)n	Simple_repeat	1	24	(0)	3700768
52	16.6	1.0	0.0	chr7	97420738	97420834	(61925139)	+	GA-rich	Low_complexity	1	98	(0)	3700769
52	10.8	1.2	0.0	chr7	98179571	98179652	(61166321)	+	(CCTC)n	Simple_repeat	1	83	(0)	3702062
519	26.1	12.7	4.2	chr7	98747851	98748086	(60597887)	C	MIRb	SINE/MIR	(9)	259	1	3703307
98	30.4	0.9	2.2	chr7	98748117	98748435	(60597538)	+	GA-rich	Low_complexity	1	322	(0)	3703308
2141	11.6	0.0	0.0	chr7	98748452	98748753	(60597220)	+	AluSg7	SINE/Alu	1	302	(7)	3703309
400	10.8	0.2	2.5	chr7	98810993	98811637	(60534336)	+	(TGG)n	Simple_repeat	1	646	(0)	3703453
639	22.1	2.6	4.6	chr7	98837618	98837692	(60508281)	C	MER92B	LTR/ERV1	(0)	636	562	3703532
1933	16.9	0.3	1.9	chr7	98837693	98838005	(60507968)	+	AluJo	SINE/Alu	2	309	(3)	3703533
1775	16.2	1.8	0.4	chr7	99180220	99180497	(60165476)	+	AluJo	SINE/Alu	1	282	(30)	3704131
318	25.4	0.1	0.0	chr7	99180498	99181248	(60164725)	+	(CT)n	Simple_repeat	1	751	(0)	3704132
2403	9.0	0.7	0.0	chr7	100426213	100426512	(58919461)	+	AluSq	SINE/Alu	2	303	(10)	3706561
253	17.8	3.3	3.6	chr7	100426620	100427261	(58918712)	+	(CCTC)n	Simple_repeat	1	663	(0)	3706562
632	23.6	11.2	2.7	chr7	100538279	100538465	(58807508)	+	L2a	LINE/L2	3220	3424	(2)	3706829
252	30.3	20.0	0.0	chr7	100538496	100538647	(58807326)	+	MIRb	SINE/MIR	26	215	(53)	3706842
246	17.1	0.0	0.0	chr7	100538654	100538694	(58807279)	+	tRNA-Thr-ACA	tRNA	2	42	(34)	3706843
45	2.3	0.0	0.0	chr7	100673816	100673860	(58672113)	+	(CGC)n	Simple_repeat	1	45	(0)	3707120
210	24.2	5.7	0.0	chr7	101609365	101609430	(57736543)	+	L2	LINE/L2	847	916	(2503)	3709223
68	21.3	2.6	3.0	chr7	101609456	101609481	(57736492)	+	(TTCT)n	Simple_repeat	1	26	(0)	3709224
32	2.8	0.0	2.6	chr7	101609482	101609520	(57736453)	+	(TCCC)n	Simple_repeat	1	39	(0)	3709225
68	21.3	2.6	3.0	chr7	101609521	101609686	(57736287)	+	(TTCT)n	Simple_repeat	3	167	(0)	3709226
1764	16.8	0.3	3.1	chr7	101609888	101610208	(57735765)	C	AluJo	SINE/Alu	(0)	312	1	3709227
193	21.1	1.0	0.2	chr7	103773093	103773479	(55572494)	+	(TCTC)n	Simple_repeat	1	390	(0)	3713145
2281	9.7	1.4	0.0	chr7	103773480	103773769	(55572204)	C	AluSz	SINE/Alu	(18)	294	1	3713146
848	31.7	11.0	2.6	chr7	106247443	106247691	(53098282)	+	L2	LINE/L2	1991	2268	(1151)	3717342
448	31.0	5.7	8.3	chr7	106517950	106518311	(52827662)	+	L2	LINE/L2	1916	2267	(1152)	3717688
73	17.9	8.8	0.8	chr7	106518314	106518540	(52827433)	+	(CCTCT)n	Simple_repeat	1	247	(0)	3717689
539	33.0	12.2	4.8	chr7	106518542	106519731	(52826242)	+	L2c	LINE/L2	2090	3387	(0)	3717690
287	30.4	8.2	7.8	chr7	111383758	111383989	(47961984)	+	L2c	LINE/L2	3024	3256	(131)	3724255
698	27.6	0.0	1.3	chr7	111383998	111384149	(47961824)	+	FRAM	SINE/Alu	1	150	(26)	3724256
107	11.3	2.9	3.2	chr7	111384155	111384364	(47961609)	+	GA-rich	Low_complexity	1	216	(0)	3724257
19110	7.9	2.2	1.2	chr7	112692695	112696501	(46649472)	C	L1MA1	LINE/L1	(89)	7632	3786	3726179
191	36.9	7.2	1.9	chr7	112789465	112789569	(46556404)	C	MIRc	SINE/MIR	(140)	128	18	3726299
3813	13.0	3.0	1.3	chr7	113102354	113102954	(46243019)	+	LTR36	LTR/ERV1	1	611	(0)	3726703
661	26.8	7.2	4.9	chr7	113102955	113103067	(46242906)	+	MIRb	SINE/MIR	157	268	(0)	3726702
20	10.8	0.0	0.0	chr7	113103085	113103114	(46242859)	+	(GT)n	Simple_repeat	1	30	(0)	3726704
1658	15.7	7.3	1.6	chr7	113103146	113103314	(46242659)	C	MLT1A0	LTR/ERVL-MaLR	(15)	350	162	3726705
54	1.9	1.9	0.0	chr7	113103315	113103368	(46242605)	+	(AG)n	Simple_repeat	1	55	(0)	3726706
1658	15.7	7.3	1.6	chr7	113103369	113103521	(46242452)	C	MLT1A0	LTR/ERVL-MaLR	(204)	161	9	3726705
2358	13.6	9.2	4.7	chr7	113188377	113188861	(46157112)	+	MER67D	LTR/ERV1	1	509	(5)	3726846
1068	19.7	6.2	0.8	chr7	113239830	113240090	(46105883)	+	MSTA	LTR/ERVL-MaLR	1	274	(158)	3726902
123	14.7	0.0	0.0	chr7	113240091	113240292	(46105681)	+	(CTCT)n	Simple_repeat	1	202	(0)	3726903
981	14.5	9.6	6.3	chr7	113240293	113240513	(46105460)	+	MSTA	LTR/ERVL-MaLR	200	428	(0)	3726902
40	19.4	3.1	2.0	chr7	113983330	113983425	(45362548)	+	(TC)n	Simple_repeat	1	99	(0)	3727783
44	0.0	0.0	0.0	chr7	113983426	113983463	(45362510)	+	(CA)n	Simple_repeat	1	38	(0)	3727784
57	14.2	0.0	0.0	chr7	115671296	115671390	(43674583)	+	(CCTC)n	Simple_repeat	1	95	(0)	3730060
837	29.7	1.9	4.8	chr7	115968742	115969013	(43376960)	+	MIRb	SINE/MIR	5	268	(0)	3730442
16	19.2	0.0	0.0	chr7	116430286	116430315	(42915658)	+	(CT)n	Simple_repeat	1	30	(0)	3731032
117	11.5	0.0	0.0	chr7	116430319	116430507	(42915466)	+	(TC)n	Simple_repeat	1	189	(0)	3731033
1788	17.1	0.0	0.7	chr7	116715970	116716250	(42629723)	+	AluJb	SINE/Alu	2	280	(32)	3731456
115	19.8	2.5	1.4	chr7	116716251	116716276	(42629697)	+	GA-rich	Low_complexity	17	42	(0)	3731457
67	1.6	0.0	0.0	chr7	116716277	116716338	(42629635)	+	(GA)n	Simple_repeat	1	62	(0)	3731458
115	19.8	2.5	1.4	chr7	116716339	116716569	(42629404)	+	GA-rich	Low_complexity	43	279	(0)	3731459
25	25.4	5.7	0.9	chr7	116953370	116953474	(42392499)	+	(CGGCCG)n	Simple_repeat	1	111	(0)	3731852
34	7.4	0.0	0.0	chr7	117002640	117002682	(42343291)	+	(TG)n	Simple_repeat	1	43	(0)	3731945
2151	10.2	0.3	0.7	chr7	117002804	117003123	(42342850)	C	AluSq2	SINE/Alu	(0)	313	1	3731946
11	24.1	2.6	0.0	chr7	117020253	117020291	(42325682)	+	(TCCTGC)n	Simple_repeat	1	40	(0)	3731967
1654	19.0	1.9	10.4	chr7	117061930	117062323	(42283650)	C	MLT1A	LTR/ERVL-MaLR	(11)	363	4	3732029
71	19.8	0.6	2.5	chr7	117265005	117265163	(42080810)	+	(TTCC)n	Simple_repeat	1	160	(0)	3732307
1754	18.1	1.4	1.4	chr7	117265164	117265456	(42080517)	C	AluJo	SINE/Alu	(19)	293	1	3732308
5946	5.8	8.5	10.2	chr7	119566189	119567161	(39778812)	+	HERV17-int	LTR/ERV1	61	1015	(7611)	3735307
430	30.9	7.3	4.4	chr7	121479120	121479346	(37866627)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	329	3737741
74	14.5	1.6	0.0	chr7	121479392	121479517	(37866456)	+	GA-rich	Low_complexity	1	128	(0)	3737742
295	30.3	0.0	0.0	chr7	121479617	121479692	(37866281)	C	MLT1N2	LTR/ERVL-MaLR	(475)	87	12	3737741
428	30.7	8.7	5.3	chr7	121479767	121479955	(37866018)	+	L2c	LINE/L2	3227	3422	(4)	3737740
362	13.8	1.4	0.6	chr7	122287970	122288268	(37057705)	+	(TTC)n	Simple_repeat	1	304	(0)	3738908
362	13.8	1.4	0.6	chr7	122288339	122288596	(37057377)	+	(TTC)n	Simple_repeat	3	260	(0)	3738909
1922	11.7	0.3	10.5	chr7	123716205	123716547	(35629426)	C	AluSx1	SINE/Alu	(4)	308	1	3740850
29	31.4	1.0	1.0	chr7	123716602	123716704	(35629269)	+	GA-rich	Low_complexity	1	104	(0)	3740851
36	2.7	0.0	0.0	chr7	124032403	124032440	(35313533)	+	(GCT)n	Simple_repeat	1	38	(0)	3741320
1981	13.1	0.7	0.7	chr7	124874474	124874763	(34471210)	+	AluSz	SINE/Alu	23	312	(0)	3742440
13	25.4	0.0	2.4	chr7	124874869	124874909	(34471064)	+	A-rich	Low_complexity	1	41	(0)	3742441
4586	19.3	7.5	3.2	chr7	124875017	124876178	(34469795)	+	Looper	DNA/PiggyBac	9	1224	(333)	3742442
321	30.1	11.7	5.9	chr7	127441689	127441717	(31904256)	C	L2b	LINE/L2	(1389)	2030	2007	3745741
1147	19.7	6.4	13.2	chr7	127441718	127442120	(31903853)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3745744
321	30.1	11.7	5.9	chr7	127442121	127442362	(31903611)	C	L2b	LINE/L2	(1413)	2006	1741	3745741
255	33.9	13.2	2.9	chr7	127442380	127442895	(31903078)	+	L2b	LINE/L2	1962	2538	(881)	3745745
807	30.9	7.5	6.4	chr7	128186561	128187215	(31158758)	C	L1M5	LINE/L1	(1322)	4824	4149	3746756
648	25.9	5.8	2.6	chr7	130079358	130079676	(29266297)	C	L1M5	LINE/L1	(2157)	3989	3663	3750529
117	21.9	1.1	1.1	chr7	130079706	130079969	(29266004)	+	(CCTC)n	Simple_repeat	1	265	(0)	3750531
1945	16.9	0.0	0.0	chr7	130079970	130080241	(29265732)	C	AluJr4	SINE/Alu	(40)	272	1	3750532
1057	25.8	3.6	4.2	chr7	131072672	131072979	(28272994)	+	LTR33C	LTR/ERVL	10	315	(314)	3752083
15	23.7	0.0	5.8	chr7	131630391	131630442	(27715531)	+	(CCT)n	Simple_repeat	1	52	(0)	3753175
48	27.2	1.9	1.9	chr7	131630794	131630947	(27715026)	+	(TCCC)n	Simple_repeat	1	157	(0)	3753176
17	27.2	1.6	1.6	chr7	131630895	131630955	(27715018)	+	(CTTT)n	Simple_repeat	1	62	(0)	3753177
364	35.4	7.1	5.3	chr7	131630962	131631432	(27714541)	+	L2	LINE/L2	2357	2836	(583)	3753178
566	28.5	16.6	1.4	chr7	132326467	132326890	(27019083)	+	L2a	LINE/L2	2910	3410	(16)	3754238
83	29.9	1.9	2.8	chr7	132326893	132327205	(27018768)	+	GA-rich	Low_complexity	1	319	(0)	3754239
742	26.5	2.9	1.8	chr7	132551215	132551383	(26794590)	+	MLT1J2	LTR/ERVL-MaLR	189	359	(89)	3754562
549	24.2	15.8	1.2	chr7	132991593	132991954	(26354019)	C	L1MEj	LINE/L1	(330)	1830	1350	3755223
891	24.8	15.0	3.0	chr7	132991977	132992483	(26353490)	+	LTR50	LTR/ERVL	24	602	(193)	3755224
593	20.0	1.6	0.0	chr7	132992503	132992627	(26353346)	+	MER33	DNA/hAT-Charlie	1	127	(197)	3755225
65	35.8	1.8	1.7	chr7	134129042	134129323	(25216650)	+	(TTTC)n	Simple_repeat	1	287	(0)	3757005
56	16.4	2.6	5.6	chr7	134129323	134129478	(25216495)	+	(TCCC)n	Simple_repeat	1	160	(0)	3757006
26	0.0	0.0	0.0	chr7	134646898	134646922	(24699051)	+	(GCT)n	Simple_repeat	1	25	(0)	3757795
55	0.0	0.0	0.0	chr7	134711681	134711727	(24634246)	+	(TG)n	Simple_repeat	1	47	(0)	3757902
1981	17.1	3.9	11.9	chr7	134711728	134711805	(24634168)	+	MLT2D	LTR/ERVL	358	414	(0)	3757900
222	31.6	3.8	6.2	chr7	134711904	134711984	(24633989)	+	L2c	LINE/L2	3289	3367	(20)	3757903
54	18.4	0.0	0.0	chr7	134711985	134712086	(24633887)	+	G-rich	Low_complexity	1	102	(0)	3757904
99	21.0	2.4	2.0	chr7	135242023	135242270	(24103703)	+	GA-rich	Low_complexity	1	254	(0)	3758623
26	25.8	1.3	1.3	chr7	135509714	135509790	(23836183)	+	GA-rich	Low_complexity	1	78	(0)	3759070
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
98	15.8	4.7	2.0	chr7	136275059	136275293	(23070680)	+	(CTTT)n	Simple_repeat	1	246	(0)	3760391
27	5.5	0.0	0.0	chr7	136275292	136275329	(23070644)	+	(TCCC)n	Simple_repeat	1	38	(0)	3760392
75	3.4	2.1	2.0	chr7	136275330	136275425	(23070548)	+	(CCTT)n	Simple_repeat	1	98	(0)	3760393
305	20.5	14.4	3.6	chr7	137448315	137448481	(21897492)	+	L1M7	LINE/L1	644	831	(5387)	3761958
129	16.7	2.5	2.1	chr7	137448483	137448759	(21897214)	+	GA-rich	Low_complexity	1	284	(0)	3761959
2150	10.7	0.3	2.9	chr7	137952808	137953116	(21392857)	C	AluSx1	SINE/Alu	(11)	301	1	3762643
245	28.2	22.0	0.0	chr7	137953230	137953339	(21392634)	+	MamGypsy2-LTR	LTR/Gypsy	43	183	(0)	3762644
7974	15.0	6.4	6.4	chr7	138035585	138035751	(21310222)	+	MER4-int	LTR/ERV1	2789	2940	(3658)	3762768
1634	19.1	0.0	0.0	chr7	138035752	138036007	(21309966)	+	AluJb	SINE/Alu	3	258	(54)	3762775
7974	15.0	6.4	6.4	chr7	138036008	138036035	(21309938)	+	MER4-int	LTR/ERV1	2941	2946	(3652)	3762768
49	0.0	0.0	0.0	chr7	138036036	138036077	(21309896)	+	(AC)n	Simple_repeat	1	42	(0)	3762776
7974	15.0	6.4	6.4	chr7	138036078	138036555	(21309418)	+	MER4-int	LTR/ERV1	2947	3456	(3142)	3762768
226	33.3	1.4	0.0	chr7	138186557	138186625	(21159348)	+	MIRc	SINE/MIR	11	80	(188)	3763081
1292	17.4	7.6	0.1	chr7	138221749	138222058	(21123915)	C	MER57-int	LTR/ERV1	(7221)	595	112	3763143
50	0.0	0.0	0.0	chr7	138222059	138222103	(21123870)	+	(GAGGAGA)n	Simple_repeat	1	45	(0)	3763148
828	13.9	14.2	0.0	chr7	138222104	138222188	(21123785)	C	MER57-int	LTR/ERV1	(7705)	111	2	3763143
2085	13.7	26.0	3.5	chr7	138222189	138222674	(21123299)	C	MER51A	LTR/ERV1	(0)	634	1	3763143
1788	17.7	0.7	0.7	chr7	138303544	138303837	(21042136)	+	AluJo	SINE/Alu	3	296	(16)	3763331
1282	24.3	5.5	4.1	chr7	138303839	138304232	(21041741)	C	MER31B	LTR/ERV1	(24)	442	43	3763332
827	19.1	5.4	0.6	chr7	138433679	138433836	(20912137)	+	AluJb	SINE/Alu	128	293	(19)	3763629
652	29.4	11.4	5.4	chr7	138434113	138434188	(20911785)	C	LTR104_Mam	LTR/Gypsy	(901)	608	531	3763631
950	27.2	12.9	10.5	chr7	140245731	140245778	(19100195)	+	L1MC4	LINE/L1	7519	7550	(492)	3766978
1926	13.7	14.9	2.5	chr7	140245779	140246183	(19099790)	+	MER31B	LTR/ERV1	1	464	(2)	3766982
950	27.2	12.9	10.5	chr7	140246184	140246425	(19099548)	+	L1MC4	LINE/L1	7551	7809	(233)	3766978
16	0.0	11.8	0.0	chr7	141454521	141454532	(17891441)	+	(CCTTT)n	Simple_repeat	1	15	(0)	3769310
70	0.0	2.5	2.5	chr7	141454533	141454611	(17891362)	+	(TCCTCTCTC)n	Simple_repeat	1	81	(0)	3769311
16	0.0	11.8	0.0	chr7	141454612	141454632	(17891341)	+	(CCTTT)n	Simple_repeat	1	22	(0)	3769312
256	23.1	10.0	0.0	chr7	141551677	141551784	(17794189)	+	MIR3	SINE/MIR	27	146	(62)	3769473
1237	22.1	4.5	7.8	chr7	145531560	145531946	(13814027)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3774752
19770	13.6	3.5	1.2	chr7	147437455	147441807	(11904166)	C	L1M1	LINE/L1	(1245)	6314	1767	3777252
46	2.3	0.0	0.0	chr7	147441808	147441851	(11904122)	+	(TC)n	Simple_repeat	1	44	(0)	3777253
19770	16.4	3.6	2.4	chr7	147441852	147443630	(11902343)	C	L1M1	LINE/L1	(5799)	1766	9	3777252
77	23.9	1.2	4.3	chr7	148135859	148135973	(11210000)	+	G-rich	Low_complexity	1	113	(0)	3778275
52	0.0	0.0	0.0	chr7	148135974	148136020	(11209953)	+	(AGGA)n	Simple_repeat	1	47	(0)	3778276
77	23.9	1.2	4.3	chr7	148136021	148136154	(11209819)	+	G-rich	Low_complexity	114	241	(0)	3778277
2163	17.1	7.3	0.5	chr7	148136218	148136612	(11209361)	+	MSTB	LTR/ERVL-MaLR	3	426	(0)	3778278
1896	16.7	1.1	0.0	chr7	148179229	148179498	(11166475)	+	AluJb	SINE/Alu	2	274	(38)	3778349
99	26.5	3.4	0.3	chr7	148179500	148179791	(11166182)	+	GA-rich	Low_complexity	1	302	(0)	3778350
446	22.1	15.2	6.0	chr7	149303217	149303466	(10042507)	C	L1ME4c	LINE/L1	(247)	583	307	3780481
19	5.9	2.6	5.0	chr7	149303531	149303569	(10042404)	+	(AACAAA)n	Simple_repeat	1	40	(0)	3780482
1628	19.0	2.4	9.2	chr7	149303584	149303984	(10041989)	C	MLT1A	LTR/ERVL-MaLR	(1)	373	1	3780483
1762	20.2	1.3	4.4	chr7	149304041	149304067	(10041906)	+	MLT1B	LTR/ERVL-MaLR	3	25	(365)	3780484
2091	13.0	0.0	0.3	chr7	149304068	149304359	(10041614)	C	AluSz	SINE/Alu	(17)	295	5	3780485
3809	19.8	4.9	6.1	chr7	149336635	149337373	(10008600)	+	L1MB3	LINE/L1	1769	2488	(4261)	3780527
44	4.7	6.1	0.0	chr7	150156540	150156605	(9189368)	+	(GA)n	Simple_repeat	1	70	(0)	3781629
210	27.2	8.0	3.6	chr7	151567082	151567165	(7778808)	+	MIRb	SINE/MIR	20	107	(161)	3783674
642	23.5	9.6	2.4	chr7	151567227	151567454	(7778519)	+	MIR	SINE/MIR	21	257	(5)	3783675
1617	21.0	0.7	0.4	chr7	152306878	152307153	(7038820)	+	AluJb	SINE/Alu	2	278	(34)	3784849
144	12.8	2.3	1.5	chr7	152307154	152307413	(7038560)	+	GA-rich	Low_complexity	3	264	(0)	3784850
778	32.0	8.9	2.8	chr7	152361981	152362443	(6983530)	C	L2a	LINE/L2	(31)	3395	2885	3784944
973	7.5	0.0	0.0	chr7	152876285	152876417	(6469556)	C	L1PA8	LINE/L1	(336)	5836	5704	3786126
249	31.8	5.0	5.0	chr7	155268965	155269070	(4076903)	C	MIR3	SINE/MIR	(83)	125	17	3789430
57	12.4	3.1	0.0	chr7	155509462	155509558	(3836415)	+	GA-rich	Low_complexity	1	100	(0)	3789721
18	13.8	0.0	6.5	chr7	155804228	155804273	(3541700)	+	(GCCC)n	Simple_repeat	1	46	(0)	3790110
102	11.4	4.0	0.5	chr7	156539622	156539798	(2806175)	+	(CT)n	Simple_repeat	1	184	(0)	3791023
3292	17.8	2.2	0.2	chr7	156591979	156592568	(2753405)	C	LTR43	LTR/ERV1	(0)	602	1	3791101
741	19.3	6.2	1.2	chr7	156592569	156592730	(2753243)	+	MLT1B	LTR/ERVL-MaLR	22	188	(186)	3791100
38	20.7	1.2	0.0	chr7	156592736	156592820	(2753153)	+	(TCTC)n	Simple_repeat	1	86	(0)	3791102
904	19.1	5.2	0.0	chr7	156592833	156593015	(2752958)	+	MLT1B	LTR/ERVL-MaLR	196	388	(2)	3791100
11166	12.7	0.9	2.3	chr7	157084323	157085485	(2260488)	+	MSTA-int	LTR/ERVL-MaLR	471	1631	(0)	3791823
2534	7.2	0.0	0.0	chr7	157346850	157347154	(1998819)	C	AluY	SINE/Alu	(6)	305	1	3792356
286	7.3	6.8	4.2	chr7	157461442	157461584	(1884389)	C	HERV17-int	LTR/ERV1	(7774)	852	706	3792499
78	7.3	0.0	0.0	chr7	157461585	157461687	(1884286)	+	(TC)n	Simple_repeat	1	103	(0)	3792500
249	29.7	1.3	0.0	chr7	157508809	157508882	(1837091)	+	MLT1H1	LTR/ERVL-MaLR	101	175	(380)	3792553
220	23.0	3.6	0.0	chr7	157508965	157509513	(1836460)	+	GA-rich	Low_complexity	1	569	(0)	3792554
498	21.9	1.6	0.8	chr7	157880962	157881085	(1464888)	+	MLT1B	LTR/ERVL-MaLR	7	131	(259)	3792817
1157	21.8	3.9	0.3	chr7	157881247	157881540	(1464433)	+	MLT1B	LTR/ERVL-MaLR	70	374	(16)	3792818
4248	12.5	7.3	0.0	chr7	158304539	158305252	(1040721)	C	MER4D1	LTR/ERV1	(130)	770	1	3793152
19	32.9	0.0	0.0	chr7	158305367	158305435	(1040538)	+	GA-rich	Low_complexity	1	69	(0)	3793153
448	23.6	2.8	5.4	chr7	158305440	158305587	(1040386)	+	HAL1M8	LINE/L1	14	157	(2834)	3793154
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
370	32.1	1.8	4.3	chr7	159207240	159207276	(138697)	C	L2	LINE/L2	(668)	2751	2721	3794198
2559	19.8	7.3	8.9	chr7	159207277	159207982	(137991)	C	LTR34	LTR/ERV1	(4)	695	2	3794199
3785	24.7	7.4	8.7	chr7	159238025	159240180	(105793)	+	L1ME1	LINE/L1	2825	4941	(2000)	3794226
260	29.6	10.2	4.3	chr7	159262894	159263151	(82822)	+	HAL1b	LINE/L1	529	803	(1618)	3794252
23	12.5	8.0	3.7	chr7	159263152	159263226	(82747)	+	GA-rich	Low_complexity	1	81	(0)	3794253
2066	26.5	8.3	4.7	chr7	159263237	159264399	(81574)	+	HAL1b	LINE/L1	747	1954	(467)	3794252
2054	25.0	7.1	7.5	chr8	969470	970158	(144168478)	+	MER63C	DNA/hAT-Blackjack	6	691	(239)	3795355
50	4.5	0.0	5.2	chr8	2142680	2142756	(142995880)	+	(TCCC)n	Simple_repeat	1	77	(0)	3796466
2423	8.8	0.7	0.3	chr8	2142757	2143055	(142995581)	C	AluSx1	SINE/Alu	(11)	301	1	3796467
321	18.9	6.8	0.2	chr8	2191107	2191927	(142946709)	+	(TCCT)n	Simple_repeat	1	877	(0)	3796531
5590	18.8	7.5	5.2	chr8	8919509	8919911	(136218725)	C	L1MC3	LINE/L1	(927)	6858	6426	3805572
588	13.8	0.0	0.0	chr8	8919912	8919991	(136218645)	C	AluSz6	SINE/Alu	(232)	80	1	3805574
54	13.3	0.0	0.0	chr8	8920216	8920305	(136218331)	+	(GAGG)n	Simple_repeat	1	90	(0)	3805575
50	21.3	0.0	0.0	chr8	8920306	8920323	(136218313)	+	(GATG)n	Simple_repeat	1	108	(0)	3805576
492	28.5	4.0	5.8	chr8	9770654	9771108	(135367528)	+	L1MC4	LINE/L1	6231	6680	(1362)	3807018
206	29.0	1.9	6.0	chr8	9771124	9772126	(135366510)	+	GA-rich	Low_complexity	1	1022	(0)	3807019
1113	28.6	10.3	5.1	chr8	9772132	9772793	(135365843)	+	L1MC4	LINE/L1	7174	7899	(143)	3807018
215	24.0	0.5	0.0	chr8	10086708	10086767	(135051869)	+	L2b	LINE/L2	3327	3387	(0)	3807554
30	12.8	6.2	2.3	chr8	10086792	10086867	(135051769)	+	GA-rich	Low_complexity	1	79	(0)	3807555
45	2.3	0.0	0.0	chr8	10086868	10086912	(135051724)	+	(GAGGGA)n	Simple_repeat	1	45	(0)	3807556
26	0.0	0.0	0.0	chr8	10086917	10086941	(135051695)	+	(GAGAAT)n	Simple_repeat	1	25	(0)	3807557
71	17.4	6.2	3.8	chr8	11144840	11145063	(133993573)	+	GA-rich	Low_complexity	1	238	(0)	3809155
1203	15.7	0.4	7.6	chr8	11145074	11145322	(133993314)	+	Tigger4a	DNA/TcMar-Tigger	6	236	(0)	3809156
35	21.4	2.5	4.9	chr8	11200979	11200995	(133937641)	+	(GCG)n	Simple_repeat	1	30	(92)	3809241
17	16.4	1.9	5.6	chr8	11200996	11201048	(133937588)	+	G-rich	Low_complexity	1	54	(0)	3809242
35	21.4	2.5	4.9	chr8	11201049	11201097	(133937539)	+	(GCG)n	Simple_repeat	31	122	(0)	3809241
26	17.8	3.6	4.7	chr8	11201192	11201274	(133937362)	+	(CGC)n	Simple_repeat	1	86	(0)	3809243
16	32.6	0.0	0.0	chr8	11201368	11201422	(133937214)	+	G-rich	Low_complexity	1	55	(0)	3809244
348	25.3	7.8	1.0	chr8	11807508	11807603	(133331033)	+	L1MC2	LINE/L1	6231	6333	(11)	3810188
1325	17.7	11.7	9.0	chr8	11807811	11808255	(133330381)	C	MER31B	LTR/ERV1	(0)	661	1	3810189
13	25.3	2.0	2.0	chr8	11808347	11808395	(133330241)	+	G-rich	Low_complexity	1	50	(0)	3810190
4563	15.3	3.4	10.3	chr8	13470284	13471437	(131667199)	+	L1MA9	LINE/L1	5203	6276	(36)	3812740
43	24.7	0.0	3.9	chr8	13471458	13471517	(131667119)	+	GA-rich	Low_complexity	1	57	(0)	3812741
971	10.1	0.0	7.1	chr8	13471518	13471699	(131666937)	+	L1PA13	LINE/L1	5991	6159	(4)	3812742
43	24.7	0.0	3.9	chr8	13471700	13471768	(131666868)	+	GA-rich	Low_complexity	58	124	(0)	3812743
37	9.6	2.9	1.4	chr8	17499322	17499391	(127639245)	+	(TC)n	Simple_repeat	1	72	(0)	3818286
631	12.2	22.6	0.7	chr8	18488745	18488885	(126649751)	+	L1P4	LINE/L1	4085	4265	(1881)	3819716
162	20.0	5.5	2.4	chr8	18488886	18489343	(126649293)	+	GA-rich	Low_complexity	1	472	(0)	3819718
157	30.5	4.6	1.3	chr8	21295383	21296059	(123842577)	+	(CT)n	Simple_repeat	1	708	(0)	3824209
49	17.4	4.1	1.6	chr8	21788807	21788927	(123349709)	+	(TCTC)n	Simple_repeat	1	126	(0)	3825006
21	16.9	0.0	6.6	chr8	21788998	21789026	(123349610)	+	G-rich	Low_complexity	1	44	(42)	3825007
14	15.3	2.6	2.6	chr8	21789027	21789064	(123349572)	+	(GGCGG)n	Simple_repeat	1	39	(0)	3825008
21	16.9	0.0	6.6	chr8	21789065	21789090	(123349546)	+	G-rich	Low_complexity	45	86	(0)	3825007
26	6.3	0.0	0.0	chr8	21789101	21789134	(123349502)	+	(GGCGGT)n	Simple_repeat	1	34	(0)	3825009
16	0.0	4.3	0.0	chr8	22392777	22392799	(122745837)	+	(CTCC)n	Simple_repeat	1	24	(0)	3826131
231	14.6	2.0	4.0	chr8	22392933	22392982	(122745654)	+	L2b	LINE/L2	3322	3370	(5)	3826132
180	25.0	6.8	5.6	chr8	22456909	22456980	(122681656)	+	Penelope1_Vert	LINE/Penelope	847	919	(168)	3826268
85	7.4	0.0	1.7	chr8	22456984	22457103	(122681533)	+	(CCTC)n	Simple_repeat	1	120	(0)	3826269
447	9.2	1.5	0.0	chr8	22457225	22457289	(122681347)	+	MLT1-int	LTR/ERVL-MaLR	2	67	(1304)	3826270
16	4.5	0.0	0.0	chr8	22457319	22457341	(122681295)	+	(TTTA)n	Simple_repeat	1	23	(0)	3826271
13	19.1	0.0	0.0	chr8	23854663	23854692	(121283944)	+	(TGC)n	Simple_repeat	1	30	(0)	3828627
42	10.2	0.0	0.0	chr8	23854706	23854770	(121283866)	+	(GCT)n	Simple_repeat	1	65	(0)	3828628
2205	10.3	2.4	0.3	chr8	24708037	24708328	(120430308)	+	AluSq2	SINE/Alu	1	298	(15)	3829855
490	27.2	11.2	1.8	chr8	25714477	25714693	(119423943)	+	MIRb	SINE/MIR	13	252	(16)	3831555
114	18.6	3.5	4.0	chr8	25714707	25715024	(119423612)	+	(TCCT)n	Simple_repeat	1	329	(0)	3831556
35	0.0	5.4	0.0	chr8	26577982	26578018	(118560618)	+	(TC)n	Simple_repeat	1	39	(0)	3832986
17	3.8	3.7	0.0	chr8	26578158	26578184	(118560452)	+	(AACAA)n	Simple_repeat	1	28	(0)	3832987
15	17.7	0.0	0.0	chr8	26578421	26578452	(118560184)	+	(GGT)n	Simple_repeat	1	32	(0)	3832988
470	32.7	8.7	3.6	chr8	27130348	27130683	(118007953)	+	L1M5	LINE/L1	4098	4452	(1694)	3833848
30	12.6	12.5	0.0	chr8	27130686	27130773	(118007863)	+	GA-rich	Low_complexity	1	99	(0)	3833849
269	32.1	9.0	6.0	chr8	27130774	27131479	(118007157)	+	L1M5	LINE/L1	4506	5235	(911)	3833848
558	19.7	5.0	2.2	chr8	27265195	27265329	(117873307)	+	L1MD3	LINE/L1	7847	7985	(10)	3834083
238	31.6	10.9	9.7	chr8	27266111	27266418	(117872218)	C	MLT1O	LTR/ERVL-MaLR	(151)	391	80	3834084
189	28.6	2.8	1.0	chr8	28012846	28013449	(117125187)	+	GA-rich	Low_complexity	1	621	(0)	3835387
214	30.4	14.1	0.0	chr8	28414876	28414954	(116723682)	+	MIRc	SINE/MIR	163	254	(14)	3836093
254	28.2	13.4	8.4	chr8	28414964	28415118	(116723518)	+	L2	LINE/L2	2699	2862	(557)	3836094
887	25.8	6.0	4.8	chr8	28415134	28415545	(116723091)	+	Charlie22a	DNA/hAT-Charlie	9	425	(66)	3836095
16	13.3	2.1	6.2	chr8	28494831	28494877	(116643759)	+	(GGCGCCC)n	Simple_repeat	1	48	(0)	3836285
15	10.0	6.2	0.0	chr8	28495350	28495381	(116643255)	+	(GCA)n	Simple_repeat	1	34	(0)	3836286
40	36.0	3.0	0.5	chr8	36927883	36928080	(108210556)	+	GA-rich	Low_complexity	1	204	(0)	3849585
101	22.7	3.1	2.7	chr8	37231473	37231763	(107906873)	+	GA-rich	Low_complexity	1	300	(0)	3850024
17	24.5	3.3	1.6	chr8	37326470	37326529	(107812107)	+	(TCT)n	Simple_repeat	1	62	(0)	3850145
17	20.5	0.0	0.0	chr8	37326553	37326586	(107812050)	+	(T)n	Simple_repeat	1	34	(0)	3850146
21	21.8	1.6	3.1	chr8	37326596	37326659	(107811977)	+	(CTCCC)n	Simple_repeat	1	65	(0)	3850147
267	30.1	2.8	0.0	chr8	37360024	37360126	(107778510)	+	MIR3	SINE/MIR	48	153	(55)	3850196
16	17.5	0.0	0.0	chr8	37452631	37452663	(107685973)	+	GA-rich	Low_complexity	1	33	(0)	3850344
957	15.7	2.2	1.1	chr8	37997186	37997365	(107141271)	+	MLT1A	LTR/ERVL-MaLR	5	186	(188)	3851395
157	26.1	2.7	0.7	chr8	37997386	37997826	(107140810)	+	(CT)n	Simple_repeat	1	453	(0)	3851396
887	21.8	0.5	2.5	chr8	37997827	37998024	(107140612)	+	MLT1A	LTR/ERVL-MaLR	181	374	(0)	3851395
44	3.5	0.0	0.0	chr8	38154458	38154507	(106984129)	+	(TTCC)n	Simple_repeat	1	50	(0)	3851759
72	4.1	0.0	0.0	chr8	38154508	38154584	(106984052)	+	(CCTC)n	Simple_repeat	1	77	(0)	3851760
407	10.8	1.0	0.1	chr8	38154908	38154985	(106983651)	C	FLAM_C	SINE/Alu	(80)	53	1	3851761
646	22.1	3.9	0.0	chr8	38230926	38231097	(106907539)	C	AluJr	SINE/Alu	(14)	298	120	3851936
2168	12.4	0.7	0.0	chr8	41184714	41185012	(103953624)	+	AluSq2	SINE/Alu	5	305	(8)	3856584
102	21.4	4.1	0.0	chr8	41185014	41185259	(103953377)	+	GA-rich	Low_complexity	1	256	(0)	3856585
353	26.5	12.2	2.1	chr8	41185281	41185513	(103953123)	+	L1MEd	LINE/L1	1963	2105	(4998)	3856586
100	30.1	2.3	0.3	chr8	41320431	41320737	(103817899)	+	(CT)n	Simple_repeat	1	314	(0)	3856796
181	30.2	4.0	5.0	chr8	41822929	41823029	(103315607)	+	MIRb	SINE/MIR	89	188	(80)	3857658
8158	22.9	4.5	5.3	chr8	43363498	43366364	(101772272)	+	L1PA12	LINE/L1	520	3268	(4887)	3860449
2198	11.9	0.0	0.0	chr8	47178981	47179273	(97959363)	+	AluSx4	SINE/Alu	1	293	(17)	3861559
507	22.6	4.1	8.8	chr8	47179274	47179337	(97959299)	+	L1M3	LINE/L1	5006	5058	(1082)	3861558
78	5.1	6.5	0.8	chr8	47179379	47179502	(97959134)	+	(GA)n	Simple_repeat	1	132	(0)	3861560
350	20.5	0.5	2.4	chr8	47179510	47179613	(97959023)	+	L1M3	LINE/L1	5079	5178	(968)	3861558
2402	9.2	0.3	0.0	chr8	47647335	47647616	(97491020)	+	AluSx	SINE/Alu	3	285	(27)	3862199
79	3.9	0.0	0.0	chr8	47647617	47647697	(97490939)	+	(AG)n	Simple_repeat	1	81	(0)	3862200
1034	31.0	14.7	3.3	chr8	47647698	47648373	(97490263)	C	L2a	LINE/L2	(174)	3252	2438	3862198
210	35.6	0.0	1.4	chr8	51618679	51618752	(93519884)	+	MIRb	SINE/MIR	2	74	(194)	3867012
1042	21.1	11.3	10.8	chr8	51909642	51910029	(93228607)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3867413
590	20.2	14.3	6.0	chr8	51910030	51910200	(93228436)	+	MER31B	LTR/ERV1	271	466	(0)	3867410
2020	15.5	0.3	0.0	chr8	51910225	51910514	(93228122)	+	AluJr4	SINE/Alu	1	291	(21)	3867414
1212	31.2	3.0	5.7	chr8	53336534	53337039	(91801597)	+	L2a	LINE/L2	2935	3426	(0)	3869381
1727	22.8	11.5	0.8	chr8	54591600	54592089	(90546547)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	3871321
662	30.7	1.4	1.4	chr8	54592391	54592611	(90546025)	+	MLT1N2	LTR/ERVL-MaLR	332	552	(10)	3871322
187	27.1	2.9	1.9	chr8	56539488	56539621	(88599015)	+	GA-rich	Low_complexity	1	136	(0)	3874074
37	0.0	0.0	0.0	chr8	56539622	56539653	(88598983)	+	(CA)n	Simple_repeat	1	32	(0)	3874075
187	27.1	2.9	1.9	chr8	56539654	56540169	(88598467)	+	GA-rich	Low_complexity	137	657	(0)	3874076
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
4912	14.9	0.1	0.1	chr8	57456630	57457368	(87681268)	+	HERVK22-int	LTR/ERVK	3	741	(6096)	3875343
600	20.2	3.2	2.5	chr8	57457799	57457920	(87680716)	+	HERVK22-int	LTR/ERVK	2327	2449	(4388)	3875343
15004	10.2	2.6	0.4	chr8	57457923	57461509	(87677127)	+	HERVK22-int	LTR/ERVK	2625	6291	(546)	3875343
409	33.3	9.1	8.3	chr8	60296933	60297259	(84841377)	+	L2b	LINE/L2	3040	3369	(6)	3878935
184	34.9	4.2	5.0	chr8	60653539	60653921	(84484715)	+	L2	LINE/L2	2702	3081	(338)	3879550
273	34.9	7.5	1.5	chr8	60715798	60715998	(84422638)	+	MIRc	SINE/MIR	11	224	(44)	3879638
823	28.3	6.9	0.3	chr8	60716041	60716363	(84422273)	+	L2a	LINE/L2	2550	2895	(524)	3879639
645	29.5	10.4	4.4	chr8	60716410	60716814	(84421822)	+	L2a	LINE/L2	2984	3415	(11)	3879639
91	14.5	2.2	2.1	chr8	60759369	60759552	(84379084)	+	(CTCTCC)n	Simple_repeat	1	188	(0)	3879703
35	17.7	4.1	0.0	chr8	60962125	60962197	(84176439)	+	(CT)n	Simple_repeat	1	76	(0)	3879968
1783	15.4	0.0	0.3	chr8	60962297	60962596	(84176040)	C	L1MA9	LINE/L1	(0)	6312	6014	3879969
21	21.6	6.6	0.0	chr8	61454308	61454368	(83684268)	+	(TC)n	Simple_repeat	1	65	(0)	3880662
26	3.1	3.0	0.0	chr8	61514925	61514957	(83623679)	+	(GAAGGCAG)n	Simple_repeat	1	34	(0)	3880742
53	24.6	1.3	1.3	chr8	61514958	61515105	(83623531)	+	GA-rich	Low_complexity	3	150	(0)	3880743
17626	15.1	2.3	1.2	chr8	62104656	62108795	(83029841)	+	L1PA16	LINE/L1	2316	6497	(6)	3881501
877	20.9	1.1	2.1	chr8	62109263	62109453	(83029183)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	3881505
210	22.7	2.1	1.5	chr8	62581700	62582228	(82556408)	+	(CTTC)n	Simple_repeat	1	540	(0)	3882075
408	30.9	1.9	7.3	chr8	62582230	62582393	(82556243)	C	L2b	LINE/L2	(0)	3375	3221	3882076
2210	14.4	0.0	0.0	chr8	65661682	65661993	(79476643)	+	AluSz	SINE/Alu	1	312	(0)	3886181
40	5.3	3.3	0.0	chr8	65661995	65662054	(79476582)	+	(CCCTCT)n	Simple_repeat	1	62	(0)	3886182
10662	4.0	0.1	7.2	chr8	65662055	65663547	(79475089)	+	SVA_D	Retroposon/SVA	1	1386	(0)	3886183
18	19.6	1.9	5.6	chr8	65766615	65766667	(79371969)	+	(TC)n	Simple_repeat	1	54	(0)	3886370
12	13.7	0.0	0.0	chr8	66177114	66177137	(78961499)	+	(GCA)n	Simple_repeat	1	24	(0)	3886967
17	19.9	2.1	2.0	chr8	66177289	66177336	(78961300)	+	(CGGCTG)n	Simple_repeat	1	49	(0)	3886968
640	17.2	0.8	9.4	chr8	66746430	66746557	(78392079)	+	FLAM_A	SINE/Alu	1	117	(25)	3888020
1822	18.2	0.0	2.4	chr8	66746560	66746850	(78391786)	C	AluJr	SINE/Alu	(18)	294	11	3888021
207	29.9	3.6	3.2	chr8	68589345	68590290	(76548346)	+	GA-rich	Low_complexity	1	980	(0)	3890902
1183	23.9	5.0	5.5	chr8	69915394	69915599	(75223037)	+	MLT1A	LTR/ERVL-MaLR	4	201	(173)	3892809
43	8.3	5.1	0.0	chr8	69915600	69915677	(75222959)	+	(TC)n	Simple_repeat	1	82	(0)	3892810
1183	23.9	5.0	5.5	chr8	69915678	69915815	(75222821)	+	MLT1A	LTR/ERVL-MaLR	202	346	(28)	3892809
709	17.9	3.7	0.6	chr8	70745467	70745623	(74393013)	C	MER5A	DNA/hAT-Charlie	(1)	188	27	3894312
21	34.2	2.3	0.0	chr8	71176780	71176865	(73961771)	+	(TCTC)n	Simple_repeat	1	88	(0)	3894899
504	22.1	4.9	0.0	chr8	71176963	71177098	(73961538)	C	L1MC5a	LINE/L1	(285)	2492	2350	3894900
2193	23.9	8.9	12.3	chr8	73655108	73655639	(71482997)	C	Charlie2a	DNA/hAT-Charlie	(0)	2861	2303	3898287
2522	5.4	0.0	0.0	chr8	73655640	73655946	(71482690)	C	AluY	SINE/Alu	(0)	311	2	3898288
198	18.0	0.8	0.3	chr8	75218740	75219111	(69919525)	+	GA-rich	Low_complexity	1	375	(0)	3900671
222	28.6	0.0	7.7	chr8	75453753	75453843	(69684793)	+	MIRb	SINE/MIR	99	182	(86)	3900998
738	17.4	0.6	10.9	chr8	75453845	75454018	(69684618)	+	MLT1B	LTR/ERVL-MaLR	5	160	(214)	3900999
52	19.6	1.8	0.0	chr8	75454026	75454135	(69684501)	+	(TCTC)n	Simple_repeat	1	112	(0)	3901000
934	24.8	0.5	0.0	chr8	75454136	75454333	(69684303)	+	MLT1B	LTR/ERVL-MaLR	188	386	(4)	3900999
294	27.3	4.9	0.0	chr8	75454346	75454422	(69684214)	+	MIRb	SINE/MIR	182	262	(6)	3900998
30	19.2	4.2	0.0	chr8	76683368	76683438	(68455198)	+	(CA)n	Simple_repeat	1	74	(0)	3902551
52	11.9	4.3	0.0	chr8	76683610	76683701	(68454935)	+	GA-rich	Low_complexity	1	96	(0)	3902552
2370	19.7	5.3	0.0	chr8	79208654	79209135	(65929501)	+	MER67D	LTR/ERV1	4	512	(2)	3905667
204	38.9	0.8	3.8	chr8	79209137	79209267	(65929369)	C	L2	LINE/L2	(481)	2938	2812	3905668
498	33.1	6.8	1.6	chr8	79209334	79209582	(65929054)	+	L1MEg	LINE/L1	17	279	(5805)	3905669
2405	15.1	3.8	3.8	chr8	80796081	80796506	(64342130)	C	MSTC	LTR/ERVL-MaLR	(0)	428	3	3908393
543	18.5	19.7	2.4	chr8	80796509	80796713	(64341923)	C	MSTC-int	LTR/ERVL-MaLR	(0)	1651	1403	3908393
647	20.4	0.0	0.9	chr8	80796714	80796821	(64341815)	+	AluJb	SINE/Alu	1	107	(205)	3908394
61	26.5	3.8	2.3	chr8	80796822	80797015	(64341621)	+	A-rich	Low_complexity	1	196	(0)	3908395
3748	26.3	7.9	9.1	chr8	80797017	80798258	(64340378)	C	MSTC-int	LTR/ERVL-MaLR	(281)	1454	255	3908396
1248	21.2	9.7	5.2	chr8	81760522	81760865	(63377771)	+	MLT1A0	LTR/ERVL-MaLR	3	363	(2)	3909748
2043	24.1	8.8	13.7	chr8	81760866	81761951	(63376685)	+	L1MEc	LINE/L1	345	1392	(5008)	3909747
162	10.5	0.0	0.0	chr8	81842344	81842580	(63296056)	+	(GAGA)n	Simple_repeat	1	237	(0)	3909852
572	31.3	8.4	5.2	chr8	82962225	82962571	(62176065)	+	L1MEc	LINE/L1	37	395	(6005)	3911317
18	4.5	0.0	0.0	chr8	82962572	82962594	(62176042)	+	(GA)n	Simple_repeat	1	23	(0)	3911318
472	28.4	14.3	2.0	chr8	82962595	82962996	(62175640)	+	L1MEc	LINE/L1	297	756	(5644)	3911317
298	29.0	3.1	1.6	chr8	85659943	85660068	(59478568)	C	L1ME4b	LINE/L1	(0)	892	765	3914925
322	27.6	0.0	0.0	chr8	85660141	85660227	(59478409)	C	MLT1F1	LTR/ERVL-MaLR	(482)	87	1	3914926
4592	9.3	0.1	1.5	chr8	85660229	85660904	(59477732)	C	L1P1	LINE/L1	(2973)	3173	2507	3914927
27	3.5	0.0	0.0	chr8	87026349	87026378	(58112258)	+	(CTCC)n	Simple_repeat	1	30	(0)	3916914
17	3.6	6.9	0.0	chr8	88327250	88327278	(56811358)	+	(CTCC)n	Simple_repeat	1	31	(0)	3918471
35	29.0	0.0	0.9	chr8	88327496	88327602	(56811034)	+	(CGC)n	Simple_repeat	1	107	(0)	3918472
19	0.0	0.0	0.0	chr8	88327748	88327764	(56810872)	+	(GC)n	Simple_repeat	1	17	(0)	3918473
1279	15.9	7.1	2.3	chr8	89758652	89758959	(55379677)	+	MER33	DNA/hAT-Charlie	1	324	(0)	3920209
32	7.2	0.0	0.0	chr8	91040818	91040861	(54097775)	+	(GCTGCTGCC)n	Simple_repeat	1	44	(0)	3921971
25	30.0	0.0	2.1	chr8	91040900	91040992	(54097644)	+	GA-rich	Low_complexity	1	93	(0)	3921972
788	0.0	0.0	0.0	chr8	95269657	95269738	(49868898)	C	tRNA-Ser-TCY	tRNA	(3)	82	1	3928507
32	3.2	0.0	0.0	chr8	95269957	95269988	(49868648)	+	(GA)n	Simple_repeat	1	32	(0)	3928508
16	42.6	3.8	0.0	chr8	95715530	95715662	(49422974)	+	(TCTC)n	Simple_repeat	1	138	(0)	3929183
185	32.4	1.0	5.6	chr8	95715727	95715834	(49422802)	C	L2a	LINE/L2	(21)	3405	3303	3929184
2279	11.5	1.3	0.0	chr8	95878307	95878611	(49260025)	+	AluSq2	SINE/Alu	5	313	(0)	3929414
103	12.0	1.9	5.0	chr8	95878612	95878827	(49259809)	+	GA-rich	Low_complexity	1	220	(0)	3929415
997	27.1	1.9	3.4	chr8	95878831	95879158	(49259478)	C	L2a	LINE/L2	(1617)	1802	1480	3929410
2076	14.2	1.3	0.7	chr8	96057288	96057596	(49081040)	+	AluSx	SINE/Alu	1	311	(1)	3929686
54	17.0	0.9	0.0	chr8	96057597	96057684	(49080952)	+	GA-rich	Low_complexity	1	89	(0)	3929687
71	0.0	0.0	0.0	chr8	96057685	96057747	(49080889)	+	(AGGA)n	Simple_repeat	1	63	(0)	3929688
54	17.0	0.9	0.0	chr8	96057748	96057763	(49080873)	+	GA-rich	Low_complexity	90	105	(0)	3929689
2471	6.7	0.0	1.0	chr8	96057885	96058184	(49080452)	C	AluY	SINE/Alu	(14)	297	1	3929690
1795	14.2	0.4	0.0	chr8	98822747	98822993	(46315643)	+	AluSx	SINE/Alu	1	248	(64)	3934220
1843	17.1	0.3	1.0	chr8	102640037	102640335	(42498301)	+	AluJb	SINE/Alu	9	305	(7)	3940800
212	17.0	1.5	1.0	chr8	102640336	102640745	(42497891)	+	GA-rich	Low_complexity	1	416	(0)	3940801
2311	14.4	2.4	0.0	chr8	102640813	102641173	(42497463)	+	MLT1B	LTR/ERVL-MaLR	21	390	(0)	3940802
4466	14.0	5.8	0.0	chr8	103829136	103829870	(41308766)	+	L1PA15	LINE/L1	5386	6165	(0)	3942826
659	25.5	2.4	4.9	chr8	105108755	105108974	(40029662)	+	Ricksha_b	DNA/MULE-MuDR	384	595	(1453)	3944730
36	7.7	3.6	0.0	chr8	105108975	105109030	(40029606)	+	(TC)n	Simple_repeat	1	58	(0)	3944731
1479	20.7	0.7	9.6	chr8	105109031	105109410	(40029226)	+	Ricksha_c	DNA/MULE-MuDR	561	898	(1150)	3944730
374	22.6	1.4	1.1	chr8	105533639	105534502	(39604134)	+	(TCCC)n	Simple_repeat	1	876	(0)	3945293
2535	6.9	0.7	0.0	chr8	106339214	106339519	(38799117)	+	AluY	SINE/Alu	1	308	(3)	3946379
43	0.0	0.0	0.0	chr8	106339520	106339556	(38799080)	+	(AT)n	Simple_repeat	1	37	(0)	3946380
290	34.9	2.4	0.0	chr8	106339640	106339722	(38798914)	+	L2a	LINE/L2	2982	3066	(353)	3946381
279	20.3	4.5	0.0	chr8	106339792	106339855	(38798781)	C	MIR	SINE/MIR	(93)	169	103	3946382
964	16.4	0.6	1.2	chr8	107839972	107840132	(37298504)	+	MLT1A	LTR/ERVL-MaLR	2	161	(213)	3948523
240	17.0	3.8	1.3	chr8	107840154	107840678	(37297958)	+	(CT)n	Simple_repeat	1	545	(0)	3948524
1055	20.2	0.3	4.6	chr8	107840690	107840926	(37297710)	+	MLT1A	LTR/ERVL-MaLR	173	396	(0)	3948523
1373	15.2	0.5	0.9	chr8	108759939	108760149	(36378487)	+	AluSx3	SINE/Alu	49	258	(53)	3949847
55	3.7	0.0	0.0	chr8	108760150	108760205	(36378431)	+	(GA)n	Simple_repeat	1	56	(0)	3949848
1665	13.8	8.6	1.3	chr8	109223479	109223779	(35914857)	+	MER61A	LTR/ERV1	1	325	(16)	3950542
826	31.3	5.0	2.4	chr8	109223773	109224063	(35914573)	C	LTR33A_	LTR/ERVL	(207)	324	26	3950541
2256	21.3	1.8	4.4	chr8	113645765	113646284	(31492352)	+	MER67D	LTR/ERV1	1	506	(8)	3956375
366	21.8	2.7	2.2	chr8	116175638	116176597	(28962039)	+	GA-rich	Low_complexity	1	986	(0)	3959647
30	35.6	3.9	1.9	chr8	117087915	117088122	(28050514)	+	GA-rich	Low_complexity	1	216	(0)	3961102
77	25.9	1.0	0.5	chr8	117608340	117608532	(27530104)	+	(CCTC)n	Simple_repeat	1	195	(0)	3961866
202	30.0	0.0	0.0	chr8	117608533	117608582	(27530054)	C	L2c	LINE/L2	(17)	3370	3321	3961867
225	33.6	7.9	0.0	chr8	117608664	117608779	(27529857)	C	L2a	LINE/L2	(0)	3426	3301	3961868
62	22.2	0.8	0.0	chr8	118780030	118780162	(26358474)	+	(CT)n	Simple_repeat	1	134	(0)	3963841
93	21.6	1.1	0.0	chr8	119070438	119070628	(26068008)	+	(TC)n	Simple_repeat	1	193	(0)	3964301
411	28.8	9.2	2.8	chr8	122026407	122026650	(23111986)	C	MLT1H2	LTR/ERVL-MaLR	(2)	553	283	3969254
89	20.0	0.0	0.0	chr8	122026651	122026822	(23111814)	+	(TCTC)n	Simple_repeat	1	172	(0)	3969255
292	28.8	6.7	5.6	chr8	122026838	122026999	(23111637)	C	MLT1H2	LTR/ERVL-MaLR	(359)	232	69	3969254
15	16.3	4.9	0.0	chr8	122748032	122748072	(22390564)	+	(TTTATAT)n	Simple_repeat	1	43	(0)	3970458
390	11.5	0.0	0.0	chr8	122748159	122748210	(22390426)	C	AluSq10	SINE/Alu	(10)	303	252	3970459
1101	13.9	20.3	0.8	chr8	122748200	122748460	(22390176)	+	MER31B	LTR/ERV1	142	466	(0)	3970460
244	20.0	1.5	0.0	chr8	122748497	122748560	(22390076)	+	MER5B	DNA/hAT-Charlie	55	109	(57)	3970461
192	12.5	0.0	0.0	chr8	122748561	122748592	(22390044)	C	MER5B	DNA/hAT-Charlie	(146)	32	1	3970462
21935	10.4	2.0	0.8	chr8	122962136	122968007	(22170629)	C	L1PB1	LINE/L1	(6)	6861	913	3970896
850	11.6	3.1	2.3	chr8	123065014	123065142	(22073494)	C	FLAM_C	SINE/Alu	(13)	130	1	3971097
683	22.8	12.8	9.8	chr8	123065447	123065825	(22072811)	+	MLT1H	LTR/ERVL-MaLR	12	403	(146)	3971099
680	2.7	0.0	0.0	chr8	123157229	123157302	(21981334)	C	tRNA-Met_	tRNA	(2)	74	1	3971276
311	18.8	5.9	0.0	chr8	123157591	123157654	(21980982)	C	L2b	LINE/L2	(15)	3360	3293	3971277
22	22.0	0.0	0.0	chr8	123157699	123157742	(21980894)	+	(AC)n	Simple_repeat	1	44	(0)	3971278
230	26.0	11.0	0.0	chr8	123709225	123709297	(21429339)	C	MIRb	SINE/MIR	(64)	204	123	3972419
37	34.1	0.6	3.7	chr8	123709309	123709470	(21429166)	+	(CTCC)n	Simple_repeat	1	163	(0)	3972420
1031	3.9	7.3	0.0	chr8	123709507	123709633	(21429003)	C	MER85	DNA/PiggyBac	(2)	137	1	3972421
16	24.0	0.0	0.0	chr8	123827974	123828008	(21310628)	+	GA-rich	Low_complexity	1	35	(0)	3972624
1399	23.9	5.7	2.8	chr8	123828066	123828404	(21310232)	+	MLT1I	LTR/ERVL-MaLR	2	358	(53)	3972625
436	27.2	31.1	0.8	chr8	124228777	124229188	(20909448)	C	L2a	LINE/L2	(0)	3387	2684	3973343
2174	13.1	0.0	0.6	chr8	124229259	124229570	(20909066)	C	AluSx	SINE/Alu	(2)	310	1	3973344
16	0.0	0.0	0.0	chr8	125219460	125219479	(19919157)	+	(CTG)n	Simple_repeat	1	20	(0)	3975132
735	26.5	16.1	0.9	chr8	125511830	125512260	(19626376)	C	L2a	LINE/L2	(0)	3426	2918	3975775
107	15.5	2.5	0.0	chr8	125512265	125512460	(19626176)	+	GA-rich	Low_complexity	1	201	(0)	3975776
400	24.6	4.2	0.6	chr8	125512511	125512645	(19625991)	+	MIR3	SINE/MIR	36	165	(97)	3975777
1033	26.0	7.8	13.4	chr8	125943936	125944428	(19194208)	+	MER31B	LTR/ERV1	1	463	(3)	3976645
7046	18.5	3.8	3.0	chr8	125944429	125944484	(19194152)	+	MER92-int	LTR/ERV1	1439	1480	(3738)	3976644
2331	8.9	1.0	0.0	chr8	125944485	125944775	(19193861)	+	AluSg	SINE/Alu	1	294	(16)	3976646
12	20.1	6.5	4.5	chr8	127736250	127736311	(17402325)	+	(AGCG)n	Simple_repeat	1	66	(0)	3979958
4197	20.4	8.9	1.6	chr8	130070337	130070806	(15067830)	+	MER21-int	LTR/ERVL	1712	2242	(1949)	3984309
143	15.5	0.4	0.4	chr8	130070815	130071055	(15067581)	+	GA-rich	Low_complexity	1	242	(0)	3984313
586	22.5	4.0	0.0	chr8	130071148	130071267	(15067369)	C	FLAM_C	SINE/Alu	(14)	129	5	3984314
4663	17.6	4.6	2.3	chr8	132019341	132021066	(13117570)	+	L1MA9	LINE/L1	4338	6117	(195)	3987768
443	25.4	8.4	1.5	chr8	132021067	132021198	(13117438)	+	MER67B	LTR/ERV1	371	512	(2)	3987767
1433	31.6	9.2	1.7	chr8	132021204	132021918	(13116718)	C	L2	LINE/L2	(1168)	2251	1478	3987765
304	32.4	5.3	1.4	chr8	133714873	133715016	(11423620)	+	MLT1K	LTR/ERVL-MaLR	323	472	(123)	3991058
217	20.3	2.3	1.9	chr8	133715027	133715420	(11423216)	+	(CTTC)n	Simple_repeat	1	396	(0)	3991059
27	2.9	2.6	2.6	chr8	133715421	133715458	(11423178)	+	(CTCC)n	Simple_repeat	1	39	(0)	3991060
217	20.3	2.3	1.9	chr8	133715459	133715565	(11423071)	+	(CTTC)n	Simple_repeat	1	107	(0)	3991061
2125	7.8	0.0	0.0	chr8	133715566	133715823	(11422813)	C	AluY	SINE/Alu	(18)	293	36	3991062
55	20.7	0.0	4.2	chr8	133860394	133860535	(11278101)	+	(CCTC)n	Simple_repeat	1	142	(0)	3991341
118	18.9	4.5	0.4	chr8	134534536	134534804	(10603832)	+	GA-rich	Low_complexity	1	281	(0)	3992454
1214	19.5	21.3	6.4	chr8	135143626	135144032	(9994604)	+	MER31B	LTR/ERV1	1	543	(0)	3993544
2114	28.8	10.6	6.7	chr8	135144296	135145737	(9992899)	C	HAL1	LINE/L1	(593)	1914	410	3993545
192	20.0	2.2	0.7	chr8	136955610	136956026	(8182610)	+	(CTCC)n	Simple_repeat	1	426	(0)	3996460
56	20.0	4.9	0.7	chr8	138547361	138547502	(6591134)	+	(TC)n	Simple_repeat	1	149	(0)	3998905
41	23.6	4.2	6.3	chr8	138547503	138547572	(6591064)	+	(TTCTCC)n	Simple_repeat	2	222	(0)	3998906
1363	26.2	3.2	9.9	chr8	140121823	140122023	(5016613)	+	MLT1E1A	LTR/ERVL-MaLR	8	212	(348)	4001393
32	9.1	0.0	0.0	chr8	140122024	140122071	(5016565)	+	(TCTC)n	Simple_repeat	1	48	(0)	4001394
1569	24.6	3.4	4.4	chr8	140122072	140122463	(5016173)	+	MLT1E1A	LTR/ERVL-MaLR	213	680	(0)	4001393
385	28.1	6.1	0.5	chr8	140122469	140122624	(5016012)	+	MIRb	SINE/MIR	34	199	(69)	4001395
99	20.1	6.1	3.9	chr8	140457828	140458190	(4680446)	+	GA-rich	Low_complexity	1	385	(0)	4001984
213	23.5	0.0	3.8	chr8	140458276	140458328	(4680308)	+	L2b	LINE/L2	3099	3149	(226)	4001985
991	14.2	11.2	0.5	chr8	140588290	140588480	(4550156)	C	Tigger1a_Art	DNA/TcMar-Tigger	(3)	494	281	4002215
405	17.6	8.1	1.1	chr8	140588470	140588561	(4550075)	C	Tigger1a_Art	DNA/TcMar-Tigger	(340)	157	59	4002215
65	17.0	0.0	0.0	chr8	140588562	140588677	(4549959)	+	G-rich	Low_complexity	1	116	(0)	4002216
10740	2.4	0.4	16.2	chr8	141201549	141203194	(3935442)	C	SVA_D	Retroposon/SVA	(0)	1386	2	4003338
216	10.4	0.9	0.3	chr8	141203200	141203522	(3935114)	+	(GA)n	Simple_repeat	1	326	(0)	4003339
1956	24.6	11.5	5.3	chr8	141203528	141204676	(3933960)	+	L1MEc	LINE/L1	4275	5503	(816)	4003333
204	15.6	5.5	1.9	chr8	142260967	142261455	(2877181)	+	G-rich	Low_complexity	1	516	(0)	4004720
808	12.9	1.7	0.0	chr8	143038260	143038375	(2100261)	+	AluJo	SINE/Alu	1	118	(194)	4005633
150	10.9	0.0	0.0	chr8	143038379	143038599	(2100037)	+	(GAGA)n	Simple_repeat	1	221	(0)	4005634
1078	14.0	0.2	0.5	chr8	143669231	143669438	(1469198)	C	LTR10B1	LTR/ERV1	(55)	492	240	4006487
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
1887	15.8	0.0	2.9	chr9	221972	222281	(138172436)	+	AluJo	SINE/Alu	1	301	(11)	4008815
586	31.4	4.3	6.0	chr9	222282	222551	(138172166)	C	L1M5	LINE/L1	(384)	5740	5469	4008814
1945	10.9	0.0	0.4	chr9	513769	514024	(137880693)	+	AluSz	SINE/Alu	36	290	(22)	4009305
1935	23.1	13.6	0.2	chr9	514463	515001	(137879716)	C	L1ME3A	LINE/L1	(162)	6011	5389	4009306
239	17.6	0.0	1.9	chr9	866994	867045	(137527672)	+	Plat_L3	LINE/CR1	3111	3161	(425)	4009910
89	19.8	3.9	2.1	chr9	2005982	2006213	(136388504)	+	(TTCC)n	Simple_repeat	1	241	(0)	4011545
188	30.2	1.9	0.0	chr9	2006366	2006418	(136388299)	C	L2c	LINE/L2	(6)	3381	3328	4011546
742	23.2	19.5	0.8	chr9	2006455	2006732	(136387985)	+	LTR33A_	LTR/ERVL	173	531	(0)	4011547
340	31.7	15.8	4.6	chr9	2300845	2301025	(136093692)	C	MIRc	SINE/MIR	(4)	264	53	4011925
2238	11.5	8.0	11.2	chr9	2301026	2301464	(136093253)	C	MSTA	LTR/ERVL-MaLR	(4)	424	1	4011926
340	31.7	15.8	4.6	chr9	2301465	2301500	(136093217)	C	MIRc	SINE/MIR	(216)	52	18	4011925
12	23.4	4.6	4.4	chr9	2621834	2621898	(135772819)	+	(CTCTCCG)n	Simple_repeat	1	68	(0)	4012376
25	24.1	4.8	0.0	chr9	2621899	2621913	(135772804)	+	(CTCCT)n	Simple_repeat	4	87	(0)	4012377
13	22.0	9.3	3.2	chr9	2622027	2622112	(135772605)	+	(CCTCCTT)n	Simple_repeat	1	94	(0)	4012378
26	0.0	0.0	0.0	chr9	2622147	2622171	(135772546)	+	(CGG)n	Simple_repeat	1	25	(0)	4012379
24	6.8	0.0	0.0	chr9	3408582	3408612	(134986105)	+	(TC)n	Simple_repeat	1	31	(0)	4013567
29	6.3	0.0	0.0	chr9	3408613	3408646	(134986071)	+	(CA)n	Simple_repeat	1	34	(0)	4013568
24	31.9	0.0	1.2	chr9	3525641	3525723	(134868994)	+	(CA)n	Simple_repeat	1	83	(0)	4013733
31	12.9	3.4	0.0	chr9	3525764	3525843	(134868874)	+	GA-rich	Low_complexity	1	82	(0)	4013734
34	9.2	0.0	0.0	chr9	3525927	3526019	(134868698)	+	(AG)n	Simple_repeat	1	93	(0)	4013735
81	11.1	4.2	2.9	chr9	3532254	3532424	(134862293)	+	(TCTCCC)n	Simple_repeat	1	173	(0)	4013745
13	17.1	8.7	0.0	chr9	4066116	4066161	(134328556)	+	(ATTTCA)n	Simple_repeat	1	50	(0)	4014475
1132	24.6	10.3	7.7	chr9	4066603	4067223	(134327494)	+	LTR41C	LTR/ERVL	1	639	(62)	4014476
26	24.7	2.8	4.5	chr9	4145684	4145790	(134248927)	+	(TCCC)n	Simple_repeat	1	110	(0)	4014571
35	18.8	6.1	2.5	chr9	4397626	4397666	(133997051)	+	A-rich	Low_complexity	1	47	(0)	4014982
60	4.6	0.0	0.0	chr9	4397667	4397733	(133996984)	+	(AGGG)n	Simple_repeat	1	67	(0)	4014983
35	18.8	6.1	2.5	chr9	4397734	4397806	(133996911)	+	A-rich	Low_complexity	48	118	(0)	4014984
3722	20.3	3.8	0.6	chr9	4814567	4815462	(133579255)	C	L1MA5	LINE/L1	(4029)	3139	2214	4015711
2840	20.4	11.8	1.7	chr9	4815497	4816351	(133578366)	C	L1MA5	LINE/L1	(6460)	708	11	4015711
2237	12.2	1.0	0.3	chr9	6015880	6016173	(132378544)	C	AluJb	SINE/Alu	(16)	296	1	4017406
27	24.2	6.1	0.9	chr9	6461292	6461390	(131933327)	+	(TCTC)n	Simple_repeat	1	105	(0)	4018065
2024	13.0	0.4	0.0	chr9	6461401	6461670	(131933047)	C	AluSz	SINE/Alu	(40)	272	2	4018066
493	22.4	1.0	0.0	chr9	8414648	8414745	(129979972)	+	MER94	DNA/hAT-Blackjack	36	134	(0)	4021059
64	16.9	0.0	0.0	chr9	8414871	8414985	(129979732)	+	GA-rich	Low_complexity	1	115	(0)	4021060
2538	14.9	4.2	0.9	chr9	10238133	10238573	(128156144)	+	MER65C	LTR/ERV1	1	456	(5)	4023488
162	26.2	1.7	0.5	chr9	12462928	12463400	(125931317)	+	(CCTC)n	Simple_repeat	1	478	(0)	4026285
19	19.6	0.0	0.0	chr9	12775843	12775883	(125618834)	+	(GCG)n	Simple_repeat	1	41	(0)	4026707
15	28.1	0.0	0.0	chr9	12775864	12775907	(125618810)	+	(GCA)n	Simple_repeat	1	44	(0)	4026708
13	23.9	0.0	2.4	chr9	12775911	12775951	(125618766)	+	(CCT)n	Simple_repeat	1	41	(0)	4026709
14	14.9	0.0	3.1	chr9	13898856	13898887	(124495830)	+	(ATGA)n	Simple_repeat	1	32	(0)	4028226
68	40.6	2.5	0.0	chr9	15099642	15099968	(123294749)	+	GA-rich	Low_complexity	1	335	(0)	4029914
1744	15.8	8.5	2.1	chr9	15421830	15422112	(122972605)	+	L1MB8	LINE/L1	5857	6166	(12)	4030519
336	27.7	1.7	8.7	chr9	16154644	16154896	(122239821)	C	UCON51	LTR?	(14)	236	2	4031534
51	2.1	0.0	0.0	chr9	16155330	16155377	(122239340)	+	(GT)n	Simple_repeat	1	48	(0)	4031535
11269	10.1	0.8	1.4	chr9	16470297	16471292	(121923425)	+	THE1A-int	LTR/ERVL-MaLR	421	1412	(168)	4031972
1614	17.4	0.0	5.2	chr9	16539231	16539518	(121855199)	+	AluJb	SINE/Alu	1	273	(39)	4032059
105	20.5	0.8	2.1	chr9	16539519	16539755	(121854962)	+	GA-rich	Low_complexity	1	239	(0)	4032060
128	9.1	2.9	0.9	chr9	16539677	16539883	(121854834)	+	(AGGAA)n	Simple_repeat	1	213	(0)	4032061
295	30.7	12.2	3.5	chr9	18424839	18425010	(119969707)	+	MamTip2	DNA/hAT-Tip100	91	279	(26)	4034652
31	15.4	7.1	2.2	chr9	18425131	18425214	(119969503)	+	(TC)n	Simple_repeat	1	90	(0)	4034653
171	10.7	4.7	5.4	chr9	19873226	19873629	(118521088)	+	(TTCT)n	Simple_repeat	1	423	(0)	4037005
121	3.4	0.0	0.0	chr9	20414280	20414402	(117980315)	+	(CTG)n	Simple_repeat	1	123	(0)	4037842
17	4.3	0.0	0.0	chr9	20622409	20622432	(117772285)	+	(CGCT)n	Simple_repeat	1	24	(0)	4038138
18	7.8	0.0	0.0	chr9	20622452	20622478	(117772239)	+	(AGC)n	Simple_repeat	1	27	(0)	4038139
15	22.0	1.7	5.1	chr9	20622547	20622604	(117772113)	+	G-rich	Low_complexity	1	59	(0)	4038140
1095	28.0	9.6	4.9	chr9	21905937	21906698	(116488019)	+	L1MEd	LINE/L1	486	1287	(5799)	4039846
2235	18.1	7.8	0.0	chr9	27079548	27079994	(111314723)	+	MLT1D	LTR/ERVL-MaLR	21	505	(0)	4046613
573	28.2	5.4	3.2	chr9	33277518	33277733	(105116984)	C	L2a	LINE/L2	(671)	2748	2528	4055110
5962	21.8	8.3	2.9	chr9	34776316	34778191	(103616526)	C	L1M2	LINE/L1	(4709)	2140	17	4057936
791	29.7	4.2	4.8	chr9	35603505	35603961	(102790756)	C	Charlie29a	DNA/hAT-Charlie	(211)	508	55	4059151
2390	13.6	0.5	13.1	chr9	38354528	38354867	(100039850)	C	MSTA	LTR/ERVL-MaLR	(0)	428	117	4064425
52	0.0	0.0	0.0	chr9	38354868	38354914	(100039803)	+	(CTG)n	Simple_repeat	1	47	(0)	4064426
2390	13.6	0.5	13.1	chr9	38354915	38355063	(100039654)	C	MSTA	LTR/ERVL-MaLR	(312)	116	1	4064425
31	23.1	4.8	3.8	chr9	38355111	38355235	(100039482)	+	GA-rich	Low_complexity	1	131	(0)	4064427
14013	14.4	2.9	4.6	chr9	38445969	38449160	(99945557)	C	L1MA6	LINE/L1	(7)	7712	4598	4064631
35	10.7	1.5	3.0	chr9	38735026	38735091	(99659626)	+	(CCTT)n	Simple_repeat	1	67	(0)	4065094
2212	9.0	1.0	1.3	chr9	38735145	38735444	(99659273)	C	AluSc	SINE/Alu	(10)	299	1	4065095
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
287	32.3	9.2	3.4	chr9	42388348	42388552	(96006165)	C	MIRb	SINE/MIR	(23)	245	28	4069999
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
3654	6.4	0.2	0.0	chr9	62800851	62801305	(75593412)	+	LTR2	LTR/ERV1	8	463	(0)	4073673
54	29.2	1.5	2.5	chr9	62801310	62801506	(75593211)	+	GA-rich	Low_complexity	1	200	(0)	4073674
13	18.9	2.8	0.0	chr9	62807627	62807662	(75587055)	+	(GGCCA)n	Simple_repeat	1	37	(0)	4073678
18600	10.6	1.7	6.0	chr9	62840284	62843326	(75551391)	C	L1PBa	LINE/L1	(927)	5198	2140	4073706
415	28.0	2.0	1.0	chr9	63817237	63817537	(74577180)	+	LSAU	Satellite	1	303	(172)	4074767
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
2188	13.1	0.3	0.0	chr9	64123391	64123695	(74271022)	+	AluSx3	SINE/Alu	3	308	(3)	4075111
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
253	26.1	0.0	0.0	chr9	70038639	70038703	(68356014)	+	MER102a	DNA/hAT-Charlie	90	154	(176)	4082516
676	24.1	5.6	1.1	chr9	70686225	70686426	(67708291)	C	L1ME4b	LINE/L1	(250)	580	367	4083593
38	2.5	0.0	0.0	chr9	70686576	70686615	(67708102)	+	(CCCT)n	Simple_repeat	1	40	(0)	4083594
41	22.8	0.0	2.0	chr9	70686627	70686675	(67708042)	+	(CCTC)n	Simple_repeat	1	48	(0)	4083595
74	1.3	1.3	1.3	chr9	70686676	70686753	(67707964)	+	(TCCT)n	Simple_repeat	1	79	(0)	4083596
41	22.8	0.0	2.0	chr9	70686754	70686805	(67707912)	+	(CCTC)n	Simple_repeat	1	52	(0)	4083597
1758	13.1	10.5	0.4	chr9	70686815	70687088	(67707629)	C	AluJb	SINE/Alu	(1)	311	7	4083598
168	22.3	0.5	1.3	chr9	71331614	71331985	(67062732)	+	GA-rich	Low_complexity	1	374	(0)	4084509
2190	17.3	5.1	4.4	chr9	71421019	71421032	(66973685)	+	MER34B	LTR/ERV1	60	72	(493)	4084624
2168	13.2	1.7	0.9	chr9	71421033	71421382	(66973335)	+	L1PA16	LINE/L1	5814	6166	(0)	4084625
1487	17.8	6.6	3.1	chr9	73552798	73552893	(64841824)	C	AluJo	SINE/Alu	(196)	116	1	4088217
15	15.9	0.0	2.7	chr9	73553005	73553041	(64841676)	+	(TTATTTT)n	Simple_repeat	1	37	(0)	4088219
20	19.1	6.9	2.6	chr9	73553125	73553196	(64841521)	+	(TCTC)n	Simple_repeat	1	77	(0)	4088220
50	7.2	2.7	0.0	chr9	73553202	73553276	(64841441)	+	(CTTC)n	Simple_repeat	1	77	(0)	4088221
302	35.4	1.9	1.2	chr9	74130789	74130948	(64263769)	C	L1MC5	LINE/L1	(2220)	7084	6924	4088983
2177	22.9	3.3	4.6	chr9	74131263	74131848	(64262869)	C	MER92B	LTR/ERV1	(52)	584	7	4088984
22	22.6	1.6	3.2	chr9	74497316	74497376	(63897341)	+	(CT)n	Simple_repeat	1	62	(0)	4089478
14	18.4	3.5	6.7	chr9	74497465	74497522	(63897195)	+	(CTTT)n	Simple_repeat	1	60	(0)	4089479
19	15.4	0.0	0.0	chr9	74497546	74497581	(63897136)	+	(CTC)n	Simple_repeat	1	36	(0)	4089480
16	10.5	3.2	0.0	chr9	74497657	74497687	(63897030)	+	(AAACAA)n	Simple_repeat	1	32	(0)	4089481
35	16.2	0.0	0.0	chr9	75545126	75545189	(62849528)	+	(TCTC)n	Simple_repeat	1	64	(0)	4091138
14	13.1	0.0	0.0	chr9	76148316	76148341	(62246376)	+	(AGAG)n	Simple_repeat	1	26	(0)	4092006
490	18.4	12.8	0.0	chr9	77099338	77099446	(61295271)	C	MER5A1	DNA/hAT-Charlie	(1)	165	41	4093746
52	13.4	0.0	4.0	chr9	78571035	78571148	(59823569)	+	GA-rich	Low_complexity	1	109	(0)	4095977
13	25.5	2.0	2.0	chr9	78971805	78971854	(59422863)	+	G-rich	Low_complexity	1	51	(0)	4096528
662	32.9	6.4	4.2	chr9	79199262	79199586	(59195131)	C	LTR33	LTR/ERVL	(0)	515	182	4096882
28	3.3	0.0	0.0	chr9	79199587	79199617	(59195100)	+	(AAAC)n	Simple_repeat	1	31	(0)	4096883
662	32.9	6.4	4.2	chr9	79199618	79199720	(59194997)	C	LTR33	LTR/ERVL	(334)	181	78	4096882
20	16.4	9.5	1.4	chr9	79234469	79234531	(59160186)	+	(TC)n	Simple_repeat	1	69	(0)	4096941
17	23.1	2.7	5.3	chr9	79234532	79234541	(59160176)	+	(TTCTCTC)n	Simple_repeat	2	76	(0)	4096942
2592	20.8	3.3	0.6	chr9	79433661	79434186	(58960531)	C	MLT1F1	LTR/ERVL-MaLR	(26)	543	3	4097244
6366	7.1	2.6	0.1	chr9	79539731	79540659	(58854058)	+	L1PA8	LINE/L1	5206	6157	(15)	4097409
19	7.2	0.0	0.0	chr9	79571362	79571390	(58823327)	+	(CCA)n	Simple_repeat	1	29	(0)	4097445
14	10.8	3.1	3.0	chr9	79571404	79571435	(58823282)	+	(GCA)n	Simple_repeat	1	33	(0)	4097446
13	26.1	2.4	0.0	chr9	79572466	79572507	(58822210)	+	(GCG)n	Simple_repeat	1	43	(0)	4097447
41	19.7	1.2	0.0	chr9	79681740	79681824	(58712893)	+	GA-rich	Low_complexity	1	86	(0)	4097589
50	2.2	0.0	0.0	chr9	79681833	79681879	(58712838)	+	(TG)n	Simple_repeat	1	47	(0)	4097590
637	26.6	4.3	2.9	chr9	79793452	79793656	(58601061)	C	LTR16B1	LTR/ERVL	(26)	454	247	4097761
490	33.0	4.3	12.2	chr9	79793820	79794509	(58600208)	+	L1MEd	LINE/L1	19	651	(6452)	4097762
4960	25.2	7.5	4.9	chr9	79908247	79910061	(58484656)	+	L1MEg	LINE/L1	4312	6145	(1092)	4097909
3796	19.8	2.7	13.1	chr9	80511800	80512805	(57881912)	+	MER54A	LTR/ERVL	3	900	(1)	4098697
330	21.0	11.8	9.3	chr9	81689313	81689527	(56705190)	C	MER52D	LTR/ERV1	(1852)	271	51	4100305
388	30.1	1.3	4.3	chr9	83030683	83030845	(55363872)	+	MLT1J2	LTR/ERVL-MaLR	52	209	(239)	4102286
23	33.0	1.9	1.9	chr9	83030846	83030950	(55363767)	+	(TTTC)n	Simple_repeat	1	107	(0)	4102287
338	29.5	5.1	3.9	chr9	83030986	83031140	(55363577)	+	MLT1J2	LTR/ERVL-MaLR	266	422	(26)	4102286
9841	3.6	2.1	13.6	chr9	83272058	83273626	(55121091)	+	SVA_C	Retroposon/SVA	1	1384	(0)	4102611
17565	8.3	3.1	3.1	chr9	83760091	83762886	(54631831)	+	L1MA2	LINE/L1	2183	4978	(1168)	4103450
765	33.3	5.7	5.7	chr9	83924399	83924945	(54469772)	+	LTR78B	LTR/ERV1	482	1028	(268)	4103735
53	0.0	0.0	0.0	chr9	85599111	85599155	(52795562)	+	(AC)n	Simple_repeat	1	45	(0)	4106436
366	27.6	8.9	4.8	chr9	85599259	85599528	(52795189)	C	L1MEj	LINE/L1	(69)	2091	1810	4106437
312	31.0	7.8	3.8	chr9	85909380	85909614	(52485103)	+	L4_B_Mam	LINE/RTE-X	503	747	(4194)	4106958
909	23.1	21.2	12.1	chr9	86592666	86593170	(51801547)	C	MLT1F1	LTR/ERVL-MaLR	(0)	560	13	4108139
229	30.3	6.4	5.0	chr9	87564261	87564399	(50830318)	+	MIR3	SINE/MIR	7	147	(61)	4109697
1459	20.0	2.5	16.5	chr9	87564404	87564864	(50829853)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	4109698
230	25.9	5.8	0.0	chr9	87606158	87606238	(50788479)	C	MER21B	LTR/ERVL	(431)	437	352	4109755
297	31.7	4.7	0.8	chr9	87606293	87606416	(50788301)	+	MIRb	SINE/MIR	98	226	(42)	4109756
191	19.7	1.8	0.7	chr9	87606441	87606841	(50787876)	+	(CTCC)n	Simple_repeat	1	408	(0)	4109757
1101	15.4	3.6	0.5	chr9	87606852	87607040	(50787677)	C	MER20	DNA/hAT-Charlie	(6)	213	19	4109758
9670	17.2	4.9	1.6	chr9	87950551	87952312	(50442405)	C	L1P4d	LINE/L1	(4966)	1969	146	4110208
87	17.5	1.2	0.6	chr9	88752805	88752970	(49641747)	+	GA-rich	Low_complexity	1	168	(0)	4111681
360	21.2	2.3	0.0	chr9	88753117	88753201	(49641516)	C	L1MB2	LINE/L1	(7)	6164	6078	4111682
156	30.0	3.8	2.0	chr9	88872812	88873041	(49521676)	+	GA-rich	Low_complexity	1	237	(0)	4111837
59	0.0	0.0	0.0	chr9	88873078	88873127	(49521590)	+	(GA)n	Simple_repeat	1	50	(0)	4111838
156	30.0	3.8	2.0	chr9	88873244	88873580	(49521137)	+	GA-rich	Low_complexity	384	732	(0)	4111839
321	26.4	23.6	1.1	chr9	89524408	89524627	(48870090)	+	MLT1H1	LTR/ERVL-MaLR	2	271	(284)	4112601
165	20.1	3.1	0.5	chr9	89524636	89525019	(48869698)	+	GA-rich	Low_complexity	1	396	(0)	4112602
2042	16.7	0.0	0.0	chr9	90086761	90087072	(48307645)	+	AluSx	SINE/Alu	1	312	(0)	4113376
16	22.6	0.0	0.0	chr9	90087074	90087106	(48307611)	+	A-rich	Low_complexity	1	33	(0)	4113377
87	16.2	3.6	3.9	chr9	90087107	90087142	(48307575)	+	GA-rich	Low_complexity	15	84	(0)	4113378
32	2.9	0.0	0.0	chr9	90087143	90087177	(48307540)	+	(GAGAGAGG)n	Simple_repeat	1	35	(0)	4113379
87	16.2	3.6	3.9	chr9	90087178	90087314	(48307403)	+	GA-rich	Low_complexity	85	222	(0)	4113380
22	26.5	0.0	5.1	chr9	90492366	90492444	(47902273)	+	(TCCC)n	Simple_repeat	1	79	(0)	4113906
1826	18.8	5.6	2.0	chr9	95440148	95440544	(42954173)	C	Tigger2	DNA/TcMar-Tigger	(2)	2716	2305	4121244
619	14.4	0.0	2.9	chr9	95440572	95440692	(42954025)	C	Tigger2a	DNA/TcMar-Tigger	(325)	109	1	4121245
40	2.2	4.3	0.0	chr9	95740870	95740915	(42653802)	+	(TC)n	Simple_repeat	1	48	(0)	4121663
483	24.2	13.0	0.4	chr9	95741128	95741355	(42653362)	+	MER112	DNA/hAT-Charlie	1	261	(0)	4121664
1234	20.6	9.7	0.7	chr9	96780164	96780305	(41614412)	C	AluJb	SINE/Alu	(13)	299	148	4123480
41	4.5	0.0	0.0	chr9	96780306	96780352	(41614365)	+	(CCTC)n	Simple_repeat	1	47	(0)	4123481
1234	20.6	9.7	0.7	chr9	96780353	96780481	(41614236)	C	AluJb	SINE/Alu	(165)	147	1	4123480
279	14.3	3.5	0.0	chr9	96780489	96780544	(41614173)	C	L1MD3	LINE/L1	(740)	7255	7198	4123482
511	21.5	0.8	0.8	chr9	96780550	96780671	(41614046)	C	L1MD3	LINE/L1	(2222)	5773	5652	4123482
1416	25.8	8.8	3.5	chr9	96780700	96780947	(41613770)	C	L1M5	LINE/L1	(1344)	4802	4507	4123483
13	8.5	0.0	3.7	chr9	98056971	98056997	(40337720)	+	(CGGGG)n	Simple_repeat	1	27	(0)	4125694
261	31.3	14.6	1.9	chr9	98057100	98057314	(40337403)	+	L2b	LINE/L2	2681	2927	(492)	4125695
64	22.0	0.5	6.3	chr9	98075305	98075511	(40319206)	+	GA-rich	Low_complexity	1	194	(0)	4125746
15	17.5	0.0	0.0	chr9	98075506	98075537	(40319180)	+	(GGTC)n	Simple_repeat	1	32	(0)	4125747
2060	15.7	0.8	7.1	chr9	98797099	98797523	(39597194)	C	L1PA16	LINE/L1	(4)	6162	5765	4127214
33	11.8	0.0	1.7	chr9	98797526	98797583	(39597134)	+	(TCCC)n	Simple_repeat	1	58	(0)	4127215
31	3.3	0.0	0.0	chr9	98797585	98797615	(39597102)	+	(TC)n	Simple_repeat	1	31	(0)	4127216
1805	17.2	0.4	0.4	chr9	98797619	98797897	(39596820)	C	AluJb	SINE/Alu	(32)	280	2	4127217
2201	19.8	8.1	0.8	chr9	100644021	100644488	(37750229)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	4130522
1032	28.8	10.8	5.1	chr9	100644489	100644871	(37749846)	C	L2a	LINE/L2	(1164)	2255	1821	4130518
42	25.0	0.9	0.9	chr9	100644875	100644984	(37749733)	+	(TCCC)n	Simple_repeat	1	111	(0)	4130523
577	28.5	8.0	0.0	chr9	100644993	100645199	(37749518)	C	L2a	LINE/L2	(1606)	1813	1589	4130518
442	30.1	9.1	8.7	chr9	100645203	100645595	(37749122)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	118	4130524
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
51	19.6	0.0	0.0	chr9	106019254	106019349	(32375368)	+	GA-rich	Low_complexity	1	96	(0)	4138359
2568	15.0	3.3	0.0	chr9	106249113	106249526	(32145191)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	4138716
295	15.4	0.7	1.8	chr9	106249630	106250182	(32144535)	+	(TTC)n	Simple_repeat	1	557	(0)	4138717
18	15.8	0.0	0.0	chr9	106862824	106862859	(31531858)	+	(TTTC)n	Simple_repeat	1	36	(0)	4139693
77	12.9	3.7	0.0	chr9	106863000	106863135	(31531582)	+	GA-rich	Low_complexity	1	141	(0)	4139694
63	19.1	0.7	2.7	chr9	106863510	106863655	(31531062)	+	GA-rich	Low_complexity	1	147	(0)	4139695
14	13.6	2.9	2.9	chr9	106863655	106863688	(31531029)	+	(GCT)n	Simple_repeat	1	35	(0)	4139696
15	9.3	5.6	2.6	chr9	106863733	106863768	(31530949)	+	GA-rich	Low_complexity	1	38	(0)	4139697
85	1.3	0.0	0.0	chr9	106864040	106864116	(31530601)	+	(CT)n	Simple_repeat	1	77	(0)	4139698
17	16.4	0.0	0.0	chr9	106864157	106864190	(31530527)	+	(GCT)n	Simple_repeat	1	34	(0)	4139699
510	31.9	7.1	2.8	chr9	107077376	107077630	(31317087)	+	L2a	LINE/L2	2191	2457	(962)	4139987
18	27.3	0.0	0.0	chr9	107077675	107077719	(31316998)	+	(TC)n	Simple_repeat	1	45	(0)	4139988
46	9.4	1.4	0.0	chr9	107077722	107077791	(31316926)	+	(CT)n	Simple_repeat	1	71	(0)	4139989
19	0.0	0.0	0.0	chr9	107077792	107077812	(31316905)	+	(GT)n	Simple_repeat	1	21	(0)	4139990
273	29.0	19.1	0.8	chr9	107077856	107077987	(31316730)	+	MamGyp-int	LTR/Gypsy	2117	2278	(2825)	4139991
3210	14.8	2.8	15.4	chr9	107273746	107274364	(31120353)	C	MER73	LTR/ERVL	(3)	641	114	4140341
3947	26.7	8.6	1.8	chr9	107375033	107375533	(31019184)	C	L2a	LINE/L2	(1231)	2188	1650	4140533
406	30.5	4.1	11.5	chr9	108282860	108283131	(30111586)	C	MIR	SINE/MIR	(6)	256	18	4142495
692	32.1	9.6	4.2	chr9	109993254	109993637	(28401080)	C	MLT1K	LTR/ERVL-MaLR	(169)	426	20	4145475
81	21.9	5.3	0.8	chr9	109993686	109993913	(28400804)	+	(TC)n	Simple_repeat	1	240	(0)	4145476
487	33.0	5.4	0.5	chr9	109993945	109994154	(28400563)	C	LTR103_Mam	LTR/ERV1?	(247)	228	8	4145477
13	24.2	1.9	3.8	chr9	110256576	110256627	(28138090)	+	(CGCCC)n	Simple_repeat	1	53	(0)	4145955
24	16.9	8.2	0.0	chr9	110579750	110579810	(27814907)	+	(CT)n	Simple_repeat	1	66	(0)	4146503
16	29.8	5.1	1.9	chr9	110579855	110579952	(27814765)	+	(TCTCCC)n	Simple_repeat	1	103	(0)	4146504
2150	16.9	2.4	9.2	chr9	111006839	111007294	(27387423)	+	MSTA	LTR/ERVL-MaLR	5	428	(0)	4147147
5646	7.9	0.8	0.0	chr9	111072286	111073061	(27321656)	C	L1PA10	LINE/L1	(10)	6158	5377	4147251
1149	21.5	2.2	0.0	chr9	111073238	111073456	(27321261)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	4147252
16	26.6	0.0	2.0	chr9	111631460	111631510	(26763207)	+	(GCT)n	Simple_repeat	1	51	(0)	4148269
11	19.5	10.0	1.5	chr9	113060165	113060224	(25334493)	+	(GCCAGCTGC)n	Simple_repeat	1	66	(0)	4150941
271	33.8	13.1	5.5	chr9	113380703	113381068	(25013649)	C	L2b	LINE/L2	(18)	3357	2960	4151556
74	24.8	2.0	3.6	chr9	113381166	113381381	(25013336)	+	(TTTC)n	Simple_repeat	1	213	(0)	4151557
43	8.8	0.0	0.0	chr9	113381382	113381443	(25013274)	+	(TCCC)n	Simple_repeat	1	62	(0)	4151558
2345	10.5	0.3	0.0	chr9	113381444	113381759	(25012958)	C	AluSq2	SINE/Alu	(0)	313	1	4151559
48	21.6	2.5	0.8	chr9	115069393	115069511	(23325206)	+	GA-rich	Low_complexity	1	122	(0)	4154951
34	13.3	0.0	1.6	chr9	115069562	115069592	(23325125)	+	(CCTT)n	Simple_repeat	1	31	(0)	4154952
185	8.4	0.0	0.0	chr9	115069593	115069837	(23324880)	+	(TCCC)n	Simple_repeat	1	245	(0)	4154953
2133	13.0	3.0	13.7	chr9	117515627	117516107	(20878610)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4159590
752	27.3	11.9	1.0	chr9	122194254	122194560	(16200157)	C	L2a	LINE/L2	(0)	3426	3082	4168518
1632	20.5	7.0	16.0	chr9	122439953	122440521	(15954196)	+	MER67D	LTR/ERV1	1	514	(0)	4169029
2710	9.9	0.3	2.6	chr9	122440529	122440910	(15953807)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	4169030
14	24.8	1.3	7.7	chr9	123929927	123930003	(14464714)	+	(GCCC)n	Simple_repeat	1	78	(0)	4171513
12	5.5	0.0	0.0	chr9	123930054	123930072	(14464645)	+	(CGC)n	Simple_repeat	1	19	(0)	4171514
24	26.3	0.0	3.7	chr9	123930114	123930207	(14464510)	+	(CGC)n	Simple_repeat	1	90	(0)	4171514
14	13.3	7.0	2.2	chr9	123930228	123930270	(14464447)	+	G-rich	Low_complexity	1	46	(0)	4171515
212	20.3	3.2	2.9	chr9	124828768	124829327	(13565390)	+	(CTTT)n	Simple_repeat	1	578	(0)	4173330
230	25.5	4.7	1.9	chr9	124829328	124829431	(13565286)	+	SVA_A	Retroposon/SVA	1	107	(1280)	4173331
273	22.4	4.3	0.0	chr9	124829461	124829527	(13565190)	+	L2b	LINE/L2	3296	3365	(10)	4173332
1038	32.6	4.2	2.0	chr9	125538092	125538491	(12856226)	C	L2	LINE/L2	(509)	2910	2502	4174865
1732	24.9	8.3	1.0	chr9	125976027	125976516	(12418201)	C	L1M5	LINE/L1	(1162)	4984	4456	4175598
64	24.3	0.0	2.5	chr9	125976745	125976755	(12417962)	+	(TCCT)n	Simple_repeat	1	161	(0)	4175602
26	26.3	8.7	1.8	chr9	125976756	125976905	(12417812)	+	(TCCTT)n	Simple_repeat	1	163	(0)	4175603
10985	15.4	4.4	0.9	chr9	125976928	125977886	(12416831)	C	L1MC1	LINE/L1	(6)	6502	5503	4175604
23	13.2	4.7	0.0	chr9	126058340	126058382	(12336335)	+	(CT)n	Simple_repeat	1	45	(0)	4175774
19	24.2	0.0	0.0	chr9	126058581	126058629	(12336088)	+	(TCTC)n	Simple_repeat	1	49	(0)	4175775
2126	25.9	10.2	1.0	chr9	126258616	126259679	(12135038)	C	L1ME3Cz	LINE/L1	(171)	826	1	4176135
2342	10.7	0.0	0.0	chr9	127581377	127581674	(10813043)	+	AluSq2	SINE/Alu	1	298	(15)	4178543
521	27.1	2.6	3.5	chr9	127581675	127581795	(10812922)	C	L1ME2	LINE/L1	(67)	6267	6180	4178542
441	24.8	1.9	3.1	chr9	127582056	127582217	(10812500)	C	L1ME2	LINE/L1	(125)	6039	5880	4178544
60	20.0	0.0	0.8	chr9	128190726	128190852	(10203865)	+	(CTG)n	Simple_repeat	1	127	(0)	4179937
289	26.2	17.7	1.7	chr9	129333714	129334014	(9060703)	+	L2b	LINE/L2	2805	3159	(228)	4182591
2119	10.9	0.0	1.7	chr9	129602164	129602457	(8792260)	C	AluSz	SINE/Alu	(17)	295	7	4183226
94	27.1	5.3	3.3	chr9	129602494	129602949	(8791768)	+	GA-rich	Low_complexity	1	480	(0)	4183227
105	5.8	4.1	0.0	chr9	130334688	130334833	(8059884)	+	(TC)n	Simple_repeat	1	152	(0)	4184817
1132	19.3	6.2	0.0	chr9	130334854	130335050	(8059667)	C	AluJr	SINE/Alu	(17)	295	86	4184818
463	28.9	12.5	2.8	chr9	131678200	131678551	(6716166)	C	L4_C_Mam	LINE/RTE-X	(183)	4955	4565	4187469
88	21.7	3.2	2.7	chr9	132978100	132978350	(5416367)	+	GA-rich	Low_complexity	1	259	(0)	4189844
257	36.5	6.8	5.0	chr9	133563600	133563801	(4830916)	+	L3	LINE/CR1	3752	3957	(142)	4190773
12	4.9	0.0	4.3	chr9	133657376	133657398	(4737319)	+	(GCCA)n	Simple_repeat	1	23	(0)	4190906
92	3.9	6.0	0.0	chr9	133657399	133657531	(4737186)	+	(AG)n	Simple_repeat	1	141	(0)	4190907
758	23.4	5.5	0.9	chr9	133755374	133755662	(4639055)	C	MER54A	LTR/ERVL	(9)	635	345	4191047
1834	19.5	5.4	5.1	chr9	133755781	133756104	(4638613)	C	MER54A	LTR/ERVL	(472)	429	109	4191047
186	20.4	2.2	0.0	chr9	133759899	133759942	(4634775)	+	MIRb	SINE/MIR	224	268	(0)	4191054
1968	17.0	2.6	1.4	chr9	134074627	134075049	(4319668)	+	L1MB5	LINE/L1	944	1371	(6146)	4191495
249	27.4	0.0	0.0	chr9	134075052	134075113	(4319604)	+	5S	rRNA	2	63	(58)	4191496
10207	4.7	0.7	5.1	chr9	134075112	134075122	(4319595)	+	SVA_B	Retroposon/SVA	32	41	(1342)	4191497
48	0.0	0.0	3.8	chr9	134075123	134075175	(4319542)	+	(CTCTCCCT)n	Simple_repeat	1	53	(0)	4191498
10207	4.7	0.7	5.1	chr9	134075176	134076577	(4318140)	+	SVA_B	Retroposon/SVA	42	1382	(1)	4191497
102	28.2	2.0	1.7	chr9	134189348	134189691	(4205026)	+	GA-rich	Low_complexity	1	351	(0)	4191695
206	28.7	9.2	7.1	chr9	135137825	135137997	(3256720)	C	MIRc	SINE/MIR	(19)	189	19	4192810
1295	25.6	3.0	8.7	chr9	135238074	135238520	(3156197)	+	MER31B	LTR/ERV1	2	430	(36)	4192938
1812	11.8	0.0	0.8	chr9	135238521	135238792	(3155925)	C	AluSx	SINE/Alu	(0)	312	39	4192939
398	22.3	0.9	0.0	chr9	135726650	135727496	(2667221)	+	(TCTC)n	Simple_repeat	1	855	(0)	4193569
984	30.1	6.2	3.2	chr9	136750399	136750920	(1643797)	+	L1MC4a	LINE/L1	6202	6592	(1290)	4194750
74	15.7	1.7	5.0	chr9	136750944	136751121	(1643596)	+	GA-rich	Low_complexity	1	181	(0)	4194751
741	27.2	11.9	1.2	chr9	136751126	136751469	(1643248)	+	L1MC4a	LINE/L1	6705	7085	(957)	4194750
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
18	19.0	2.4	0.0	chr9	137516820	137516861	(877856)	+	(TAA)n	Simple_repeat	1	43	(0)	4195727
192	31.4	4.9	0.8	chrX	3243515	3244358	(152796537)	+	GA-rich	Low_complexity	1	885	(0)	4364529
547	19.4	1.0	1.0	chrX	3244436	3244534	(152796361)	+	LTR78	LTR/ERV1	1206	1304	(0)	4364530
59	25.0	4.2	4.7	chrX	3583853	3584163	(152456732)	+	GA-rich	Low_complexity	1	309	(0)	4365132
353	33.9	3.8	5.8	chrX	5532049	5532289	(150508606)	+	L1M4a2	LINE/L1	2453	2688	(3631)	4368641
218	27.1	2.9	0.0	chrX	5532290	5532921	(150507974)	+	GA-rich	Low_complexity	1	650	(0)	4368645
128	24.4	1.9	2.7	chrX	7818536	7818903	(148221992)	+	GA-rich	Low_complexity	1	375	(0)	4372246
245	29.9	6.1	2.7	chrX	9497503	9497612	(146543283)	C	Tigger19b	DNA/TcMar-Tigger	(425)	125	12	4374902
369	12.2	0.0	0.0	chrX	9497685	9497733	(146543162)	+	AluJr4	SINE/Alu	174	222	(90)	4374903
54	8.5	0.0	0.0	chrX	9497741	9497816	(146543079)	+	(CCTC)n	Simple_repeat	1	76	(0)	4374904
28	19.9	3.0	0.0	chrX	9497817	9497903	(146542992)	+	(TCTC)n	Simple_repeat	1	89	(0)	4374905
830	14.4	0.0	3.0	chrX	9497904	9498035	(146542860)	C	FLAM_C	SINE/Alu	(15)	128	1	4374906
734	26.0	6.0	4.4	chrX	9969830	9970123	(146070772)	C	L1MC5a	LINE/L1	(598)	2179	1881	4375688
1422	15.8	0.4	4.2	chrX	9970620	9970860	(146070035)	C	AluJr	SINE/Alu	(44)	268	37	4375692
73	11.5	0.0	0.0	chrX	10175856	10175971	(145864924)	+	(CT)n	Simple_repeat	1	116	(0)	4376068
16	5.3	0.0	0.0	chrX	10175972	10175991	(145864904)	+	(GT)n	Simple_repeat	1	20	(0)	4376069
66	5.7	0.0	0.0	chrX	10566498	10566571	(145474324)	+	(TC)n	Simple_repeat	1	74	(0)	4376673
182	31.4	2.9	5.6	chrX	13293401	13293508	(142747387)	C	L2c	LINE/L2	(1407)	2012	1908	4380948
1212	18.8	1.7	4.4	chrX	13294107	13294401	(142746494)	+	L1MA9	LINE/L1	5990	6276	(36)	4380955
291	24.4	0.6	7.5	chrX	15433429	15434495	(140606400)	+	GA-rich	Low_complexity	1	1073	(0)	4384368
1602	30.4	9.3	4.2	chrX	15537366	15537963	(140502932)	C	MER115	DNA/hAT-Tip100	(1)	692	61	4384534
61	7.5	5.0	0.0	chrX	15538133	15538233	(140502662)	+	(TC)n	Simple_repeat	1	106	(0)	4384535
561	16.2	7.9	5.4	chrX	15538284	15538394	(140502501)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	4384536
40	9.1	1.7	0.0	chrX	15858668	15858727	(140182168)	+	(TC)n	Simple_repeat	1	61	(0)	4385084
1656	22.5	1.3	7.8	chrX	17408737	17408947	(138631948)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	181	4387797
33	0.0	3.1	0.0	chrX	17408948	17408979	(138631916)	+	(GA)n	Simple_repeat	1	33	(0)	4387798
1656	22.5	1.3	7.8	chrX	17408980	17409167	(138631728)	C	MLT1A	LTR/ERVL-MaLR	(194)	180	1	4387797
20	3.9	0.0	0.0	chrX	18424724	18424750	(137616145)	+	(TGC)n	Simple_repeat	1	27	(0)	4389523
28	17.3	1.9	0.0	chrX	18424846	18424898	(137615997)	+	(TG)n	Simple_repeat	1	54	(0)	4389524
1062	20.8	5.5	6.1	chrX	18828813	18829163	(137211732)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	4390228
471	21.8	10.1	10.5	chrX	18829268	18829477	(137211418)	+	MER57A-int	LTR/ERV1	327	535	(5652)	4390229
608	26.3	14.9	1.9	chrX	18829463	18829718	(137211177)	+	MER34B-int	LTR/ERV1	254	548	(4808)	4390230
161	27.1	2.4	3.0	chrX	19477737	19478227	(136562668)	+	GA-rich	Low_complexity	1	488	(0)	4391433
185	18.6	2.3	6.5	chrX	19478431	19478476	(136562419)	+	L3	LINE/CR1	806	849	(3250)	4391434
538	24.0	16.9	2.2	chrX	19760916	19761141	(136279754)	+	HAL1	LINE/L1	1651	1916	(591)	4391899
100	22.2	5.8	0.7	chrX	19761144	19761434	(136279461)	+	GA-rich	Low_complexity	1	308	(0)	4391900
438	30.9	6.4	2.5	chrX	19761556	19761794	(136279101)	+	HAL1	LINE/L1	2239	2487	(20)	4391899
1217	17.1	1.4	1.8	chrX	20027442	20027661	(136013234)	C	MER20	DNA/hAT-Charlie	(0)	219	1	4392403
79	14.7	0.7	0.0	chrX	20027681	20027817	(136013078)	+	GA-rich	Low_complexity	1	138	(0)	4392404
20	30.1	0.0	0.0	chrX	20027763	20027828	(136013067)	+	(AGACAC)n	Simple_repeat	1	66	(0)	4392405
409	30.8	8.0	3.9	chrX	20028060	20028262	(136012633)	C	MIRb	SINE/MIR	(16)	252	41	4392406
11	21.6	0.0	4.9	chrX	20266229	20266269	(135774626)	+	(TCCCGCC)n	Simple_repeat	1	41	(0)	4392857
282	26.4	7.0	0.0	chrX	20296559	20296675	(135744220)	+	L1M5	LINE/L1	4740	4865	(1281)	4392903
48	15.5	2.1	0.0	chrX	20547791	20547883	(135493012)	+	GA-rich	Low_complexity	1	95	(0)	4393343
42	0.0	0.0	0.0	chrX	21374595	21374632	(134666263)	+	(GCA)n	Simple_repeat	1	38	(0)	4394394
2346	13.5	11.2	6.5	chrX	22121117	22121559	(133919336)	C	MER31B	LTR/ERV1	(0)	466	1	4395530
139	6.7	1.9	1.9	chrX	24364241	24364451	(131676444)	+	(CTGCTG)n	Simple_repeat	1	215	(0)	4399373
530	16.4	4.3	1.8	chrX	25814784	25814895	(130226000)	+	Ricksha_c	DNA/MULE-MuDR	289	403	(1645)	4401643
457	28.6	6.4	3.1	chrX	25814896	25815090	(130225805)	+	MLT2B2	LTR/ERVL	45	246	(207)	4401644
890	23.9	3.7	3.7	chrX	25815562	25815871	(130225024)	+	MLT2B2	LTR/ERVL	221	547	(8)	4401644
426	31.4	9.3	1.0	chrX	28544369	28544564	(127496331)	+	MIRc	SINE/MIR	2	215	(53)	4405371
557	22.0	6.6	3.4	chrX	29225404	29225492	(126815403)	C	MER5A1	DNA/hAT-Charlie	(0)	166	69	4406393
2316	17.7	6.4	4.2	chrX	29225493	29225994	(126814901)	C	MER67D	LTR/ERV1	(0)	514	1	4406394
985	8.6	24.3	0.0	chrX	31220922	31221021	(124819874)	+	MER30	DNA/hAT-Charlie	127	229	(1)	4409441
791	31.7	18.8	2.7	chrX	31221022	31221539	(124819356)	+	L2c	LINE/L2	2593	3164	(223)	4409437
83	11.2	0.8	0.0	chrX	31833274	31833401	(124207494)	+	(GAGA)n	Simple_repeat	1	129	(0)	4410424
32	27.8	3.9	8.1	chrX	38982865	38983149	(117057746)	+	GA-rich	Low_complexity	1	296	(0)	4419831
332	26.0	11.8	3.9	chrX	39870985	39871140	(116169755)	C	MLT1G	LTR/ERVL-MaLR	(227)	364	195	4421348
319	30.7	14.1	0.0	chrX	39871197	39871336	(116169559)	C	MLT1G	LTR/ERVL-MaLR	(366)	189	27	4421348
1675	16.2	2.4	1.0	chrX	39871352	39871641	(116169254)	C	AluJo	SINE/Alu	(12)	300	7	4421349
269	29.7	15.3	0.0	chrX	40471677	40471787	(115569108)	+	L2c	LINE/L2	3031	3161	(226)	4422524
2236	10.8	0.3	1.3	chrX	40517063	40517369	(115523526)	+	AluJb	SINE/Alu	1	304	(8)	4422625
26	21.1	0.0	1.7	chrX	40517370	40517429	(115523466)	+	GA-rich	Low_complexity	1	60	(0)	4422626
5133	13.0	5.8	4.7	chrX	41113636	41114470	(114926425)	+	Tigger2b_Pri	DNA/TcMar-Tigger	2	838	(230)	4423699
1962	16.6	0.0	1.3	chrX	41441327	41441640	(114599255)	+	AluJb	SINE/Alu	2	311	(1)	4424418
15	12.0	3.7	0.0	chrX	41441642	41441668	(114599227)	+	(CA)n	Simple_repeat	1	28	(0)	4424419
1008	8.7	0.0	0.0	chrX	41441675	41441800	(114599095)	+	AluSg7	SINE/Alu	1	126	(183)	4424420
391	15.9	0.0	2.8	chrX	41441824	41441894	(114599001)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(999)	69	1	4424421
12	0.0	9.1	0.0	chrX	41517667	41517688	(114523207)	+	(AAAG)n	Simple_repeat	1	24	(0)	4424605
60	1.8	0.0	0.0	chrX	41517765	41517822	(114523073)	+	(AGC)n	Simple_repeat	1	58	(0)	4424606
4463	22.9	2.4	3.8	chrX	43369961	43371404	(112669491)	+	L1MCa	LINE/L1	2438	3825	(2496)	4427215
45	11.3	0.0	0.0	chrX	43973454	43973520	(112067375)	+	(AG)n	Simple_repeat	1	67	(0)	4428093
15	4.8	0.0	0.0	chrX	43973713	43973734	(112067161)	+	(TTTC)n	Simple_repeat	1	22	(0)	4428094
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
222	29.8	4.7	9.0	chrX	44834972	44835126	(111205769)	+	L2c	LINE/L2	2701	2848	(571)	4429844
774	17.2	8.0	1.9	chrX	45603373	45603540	(110437355)	+	MSTB1	LTR/ERVL-MaLR	1	222	(210)	4430981
64	7.6	1.2	0.0	chrX	45603541	45603625	(110437270)	+	(CT)n	Simple_repeat	1	86	(0)	4430982
774	20.5	7.1	1.7	chrX	45603626	45603747	(110437148)	+	MSTB1	LTR/ERVL-MaLR	223	353	(79)	4430981
20	23.8	1.6	1.6	chrX	45603797	45603857	(110437038)	+	(CCCT)n	Simple_repeat	1	62	(0)	4430983
88	15.1	0.0	3.0	chrX	45710878	45711083	(110329812)	+	(CTTT)n	Simple_repeat	1	199	(0)	4431110
3155	18.7	1.8	0.4	chrX	46318023	46318580	(109722315)	+	MER34A	LTR/ERV1	1	566	(5)	4431959
39	19.1	0.0	0.0	chrX	46318589	46318666	(109722229)	+	G-rich	Low_complexity	1	78	(0)	4431960
78	0.0	0.0	0.0	chrX	46318669	46318737	(109722158)	+	(AGGA)n	Simple_repeat	1	69	(0)	4431961
267	24.6	9.9	10.6	chrX	47192873	47192956	(108847939)	C	MIRb	SINE/MIR	(74)	194	104	4433583
41	0.0	0.0	0.0	chrX	48631673	48631709	(107409186)	+	(CTG)n	Simple_repeat	1	37	(0)	4436505
773	24.2	0.5	0.0	chrX	48631996	48632181	(107408714)	+	MER5A	DNA/hAT-Charlie	1	187	(2)	4436506
1818	16.4	0.0	0.0	chrX	49345995	49346281	(106694614)	C	AluSx	SINE/Alu	(25)	287	1	4437942
988	15.3	5.4	0.0	chrX	50660210	50660366	(105380529)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	4439649
1001	28.1	7.2	4.8	chrX	50660367	50660513	(105380382)	C	L1ME4b	LINE/L1	(613)	279	134	4439648
53	24.2	0.0	0.0	chrX	50660514	50660632	(105380263)	+	(CTCT)n	Simple_repeat	1	119	(0)	4439650
1832	17.2	0.7	1.1	chrX	50660633	50660911	(105379984)	C	AluJr	SINE/Alu	(29)	283	6	4439651
46	2.2	2.1	0.0	chrX	50801245	50801291	(105239604)	+	(GA)n	Simple_repeat	1	48	(0)	4439858
195	28.7	5.6	7.3	chrX	51395569	51395677	(104645218)	C	MIR	SINE/MIR	(111)	151	45	4440572
15	19.0	2.6	0.0	chrX	51803443	51803480	(104237415)	+	(CTCCTAC)n	Simple_repeat	1	39	(0)	4441139
90	33.8	2.5	1.4	chrX	53072231	53072382	(102968513)	+	(CT)n	Simple_repeat	1	154	(0)	4442996
31	0.0	2.9	2.8	chrX	53072383	53072417	(102968478)	+	(TC)n	Simple_repeat	1	36	(0)	4442997
90	33.8	2.5	1.4	chrX	53072418	53072695	(102968200)	+	(CT)n	Simple_repeat	1	282	(0)	4442998
25	9.4	0.0	0.0	chrX	53072711	53072753	(102968142)	+	(GA)n	Simple_repeat	1	43	(0)	4442999
104	5.6	4.7	0.0	chrX	53908641	53908789	(102132106)	+	(AT)n	Simple_repeat	1	156	(0)	4444606
39	0.0	4.7	0.0	chrX	53908901	53908943	(102131952)	+	(GAGG)n	Simple_repeat	1	45	(0)	4444607
100	2.0	1.0	0.0	chrX	53908945	53909044	(102131851)	+	(GAGA)n	Simple_repeat	1	101	(0)	4444608
24	11.2	0.0	0.0	chrX	55490195	55490234	(100550661)	+	(GAGA)n	Simple_repeat	1	40	(0)	4447196
377	26.2	7.8	7.2	chrX	55490247	55490398	(100550497)	+	MIRc	SINE/MIR	13	165	(103)	4447197
27	24.8	5.0	1.9	chrX	56563351	56563383	(99477512)	+	(CT)n	Simple_repeat	1	61	(43)	4448311
12	15.6	8.9	2.0	chrX	56563384	56563428	(99477467)	+	(CTCTG)n	Simple_repeat	1	49	(0)	4448312
12	26.6	2.0	3.9	chrX	56563408	56563458	(99477437)	+	(TTCT)n	Simple_repeat	1	52	(0)	4448313
27	24.8	5.0	1.9	chrX	56563429	56563449	(99477446)	+	(CT)n	Simple_repeat	62	104	(0)	4448311
25	27.4	3.1	4.6	chrX	56565901	56566027	(99474868)	+	(TCCT)n	Simple_repeat	1	131	(0)	4448314
47	27.3	6.8	1.4	chrX	64387689	64387895	(91653000)	+	GA-rich	Low_complexity	1	221	(0)	4451267
83	2.1	1.0	3.9	chrX	67545317	67545419	(88495476)	+	(GCA)n	Simple_repeat	1	104	(0)	4454935
17	26.1	1.4	4.3	chrX	67545710	67545778	(88495117)	+	(CAG)n	Simple_repeat	1	70	(0)	4454936
7260	9.4	0.3	1.3	chrX	68349057	68350257	(87690638)	+	L1PA7	LINE/L1	5147	6303	(0)	4456095
77	25.3	1.9	1.4	chrX	68350340	68350552	(87690343)	+	(CCTT)n	Simple_repeat	1	217	(0)	4456096
1596	17.9	6.8	0.4	chrX	68350553	68350814	(87690081)	C	AluJr	SINE/Alu	(32)	280	1	4456097
70	8.9	0.9	0.9	chrX	71140739	71140848	(84900047)	+	(AGC)n	Simple_repeat	1	111	(0)	4460875
62	11.0	0.0	0.0	chrX	71141228	71141327	(84899568)	+	(AGCAGC)n	Simple_repeat	1	100	(0)	4460876
85	3.6	0.0	0.0	chrX	71255085	71255170	(84785725)	+	(TC)n	Simple_repeat	1	86	(0)	4461123
36	22.6	2.2	1.1	chrX	71255181	71255270	(84785625)	+	(CT)n	Simple_repeat	1	92	(0)	4461124
7719	18.5	9.4	8.4	chrX	71337491	71338056	(84702839)	C	L1M4	LINE/L1	(3097)	3547	2956	4461316
2721	14.3	3.6	1.4	chrX	71338060	71338492	(84702403)	+	MSTB2	LTR/ERVL-MaLR	15	457	(0)	4461329
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
921	17.1	1.2	0.0	chrX	74178921	74179078	(81861817)	+	HERVK3-int	LTR/ERVK	2330	2489	(4348)	4465236
28	20.7	4.3	3.1	chrX	74421368	74421461	(81619434)	+	GA-rich	Low_complexity	1	98	(0)	4465610
26	18.1	1.5	3.0	chrX	74421525	74421590	(81619305)	+	(GCA)n	Simple_repeat	1	67	(0)	4465611
46	32.8	0.6	0.6	chrX	74421702	74421873	(81619022)	+	(AGCCGG)n	Simple_repeat	1	173	(0)	4465612
13	23.0	1.8	5.3	chrX	74924934	74924989	(81115906)	+	(CGCTGT)n	Simple_repeat	1	57	(0)	4466273
25	27.0	1.3	1.2	chrX	74924972	74925050	(81115845)	+	(CGC)n	Simple_repeat	1	80	(0)	4466274
32	31.3	0.8	1.6	chrX	74925326	74925447	(81115448)	+	(GCT)n	Simple_repeat	1	123	(0)	4466275
38	7.7	0.0	1.8	chrX	74925484	74925540	(81115355)	+	(CCT)n	Simple_repeat	1	57	(0)	4466276
4797	17.5	5.2	3.7	chrX	77420430	77420815	(78620080)	C	MER92-int	LTR/ERV1	(4821)	397	1	4468274
949	19.6	17.2	6.4	chrX	77420816	77421098	(78619797)	C	MER92D	LTR/ERV1	(0)	320	1	4468274
266	30.5	1.2	1.2	chrX	77421099	77421181	(78619714)	C	L2a	LINE/L2	(495)	2924	2842	4468272
2258	8.7	1.1	1.1	chrX	77555893	77556178	(78484717)	+	AluSx3	SINE/Alu	1	286	(25)	4468459
319	25.2	40.5	3.4	chrX	77556412	77556593	(78484302)	+	MIRc	SINE/MIR	7	258	(10)	4468460
11314	2.5	0.3	12.6	chrX	77765691	77767271	(78273624)	C	SVA_D	Retroposon/SVA	(0)	1386	1	4468797
203	23.5	8.1	1.4	chrX	77767300	77767368	(78273527)	+	MIR3	SINE/MIR	128	201	(7)	4468796
2393	11.1	0.3	0.0	chrX	77767398	77767694	(78273201)	C	AluSx1	SINE/Alu	(14)	298	1	4468798
182	28.1	1.7	1.7	chrX	78960335	78960392	(77080503)	+	MIRc	SINE/MIR	86	143	(125)	4470385
48180	5.4	1.0	0.9	chrX	79956443	79962455	(76078440)	+	HERV17-int	LTR/ERV1	1	6019	(2607)	4471308
12101	10.8	1.7	1.0	chrX	86087291	86089639	(69951256)	+	L1PB	LINE/L1	3447	5804	(347)	4477722
10880	22.0	4.4	6.1	chrX	88839257	88842309	(67198586)	+	L1M1	LINE/L1	5	3002	(4563)	4480717
1559	20.5	1.3	3.0	chrX	89045585	89045886	(66995009)	C	AluJr	SINE/Alu	(11)	301	5	4480979
3690	19.0	5.3	5.5	chrX	89045887	89046003	(66994892)	C	L1M4	LINE/L1	(3147)	2999	2885	4480978
13	6.2	4.9	9.3	chrX	97399212	97399254	(58641641)	+	(GTT)n	Simple_repeat	1	41	(0)	4490651
188	20.0	5.7	5.7	chrX	97399331	97399383	(58641512)	C	OldhAT1	DNA/hAT-Ac	(845)	2003	1951	4490652
22	19.1	2.8	4.1	chrX	100409953	100410023	(55630872)	+	(TGAGTG)n	Simple_repeat	1	73	(0)	4494261
16	29.0	0.0	0.0	chrX	100410216	100410265	(55630630)	+	(GCT)n	Simple_repeat	1	50	(0)	4494262
400	7.7	0.0	0.0	chrX	101407340	101407391	(54633504)	+	MER66B	LTR/ERV1	295	346	(140)	4495989
40	14.8	2.6	0.0	chrX	101407409	101407485	(54633410)	+	GA-rich	Low_complexity	1	79	(0)	4495990
152	8.3	0.8	3.9	chrX	103152523	103152775	(52888120)	+	(GAAA)n	Simple_repeat	1	255	(0)	4498147
2131	11.9	8.1	7.2	chrX	103152776	103153192	(52887703)	+	MSTA	LTR/ERVL-MaLR	1	421	(7)	4498148
191	18.3	17.4	0.0	chrX	103587929	103587999	(52452896)	+	MIRc	SINE/MIR	134	219	(49)	4498850
309	17.9	7.8	1.0	chrX	106959851	106959946	(49080949)	C	L1ME4a	LINE/L1	(3)	6121	6019	4503428
1056	27.2	1.2	0.8	chrX	106960410	106960654	(49080241)	+	MIR	SINE/MIR	2	247	(15)	4503429
61	16.4	0.0	0.0	chrX	107174013	107174136	(48866759)	+	(TCTC)n	Simple_repeat	1	124	(0)	4503744
2108	15.2	0.0	1.3	chrX	107174137	107174452	(48866443)	C	AluJb	SINE/Alu	(0)	312	1	4503745
271	10.0	0.0	0.0	chrX	108671444	108671483	(47369412)	C	MIR3	SINE/MIR	(3)	205	166	4506086
2153	16.6	4.2	1.9	chrX	108671514	108671930	(47368965)	C	MER31B	LTR/ERV1	(39)	427	1	4506087
439	28.3	0.2	0.2	chrX	108671931	108672049	(47368846)	C	MIR3	SINE/MIR	(89)	141	23	4506088
29649	10.6	2.0	3.0	chrX	109238620	109241559	(46799336)	C	HERVIP10FH-int	LTR/ERV1	(1912)	3190	490	4506613
471	26.1	6.8	2.7	chrX	109241583	109241856	(46799039)	C	HERVIP10FH-int	LTR/ERV1	(7047)	556	283	4506613
356	24.2	2.0	4.8	chrX	109829657	109829760	(46211135)	C	MER102a	DNA/hAT-Charlie	(190)	140	40	4507426
58	29.4	0.0	0.0	chrX	112779068	112779231	(43261664)	+	(GCCGGA)n	Simple_repeat	1	164	(0)	4511895
55	31.5	1.0	1.0	chrX	112779157	112779362	(43261533)	+	(AGCAGC)n	Simple_repeat	1	208	(0)	4511896
28	12.3	0.0	0.0	chrX	112779377	112779429	(43261466)	+	(GCA)n	Simple_repeat	1	53	(0)	4511897
12	30.9	0.0	0.0	chrX	112779435	112779473	(43261422)	+	(TGG)n	Simple_repeat	1	39	(0)	4511898
257	25.7	0.0	2.8	chrX	114370759	114370830	(41670065)	C	MER31B	LTR/ERV1	(5)	461	392	4513993
365	30.8	0.0	0.0	chrX	114370831	114370937	(41669958)	+	MER34	LTR/ERV1	1	107	(435)	4513994
1706	21.4	8.8	3.9	chrX	114370932	114371392	(41669503)	+	LTR29	LTR/ERV1	137	622	(0)	4513995
548	21.1	3.1	0.0	chrX	114371393	114371512	(41669383)	C	MER31B	LTR/ERV1	(70)	396	273	4513993
831	19.0	6.7	0.6	chrX	114371534	114371702	(41669193)	C	MER31B	LTR/ERV1	(286)	180	1	4513993
35	0.0	0.0	0.0	chrX	115491709	115491738	(40549157)	+	(TC)n	Simple_repeat	1	30	(0)	4515611
20	18.6	0.0	2.2	chrX	115491742	115491787	(40549108)	+	(TCCC)n	Simple_repeat	1	46	(0)	4515612
4179	19.4	3.9	5.7	chrX	118068269	118069109	(37971786)	+	L1M2a	LINE/L1	13	836	(6332)	4518501
251	29.3	8.1	5.5	chrX	118918210	118918426	(37122469)	+	Tigger20a	DNA/TcMar-Tigger	39	261	(712)	4520135
21	0.0	0.0	0.0	chrX	118918629	118918651	(37122244)	+	(CA)n	Simple_repeat	1	23	(0)	4520136
80	5.3	2.0	0.0	chrX	119000776	119000873	(37040022)	+	(TC)n	Simple_repeat	1	100	(0)	4520291
16	10.8	3.2	0.0	chrX	119001207	119001237	(37039658)	+	(GAGG)n	Simple_repeat	1	32	(0)	4520292
473	24.8	4.6	4.6	chrX	119001332	119001483	(37039412)	+	MIRb	SINE/MIR	16	167	(101)	4520293
249	32.9	0.0	0.0	chrX	119401801	119401876	(36639019)	C	L2c	LINE/L2	(646)	2773	2698	4520983
202	30.2	25.2	0.0	chrX	119402110	119402195	(36638700)	C	MamSINE1	SINE/tRNA-RTE	(91)	199	85	4520984
370	33.5	5.4	5.0	chrX	119442096	119442199	(36598696)	C	L2	LINE/L2	(631)	2788	2691	4521051
14	21.8	0.0	0.0	chrX	119692862	119692898	(36347997)	+	(CCCGCCC)n	Simple_repeat	1	37	(0)	4521591
2228	10.9	1.0	0.0	chrX	119784626	119784919	(36255976)	C	AluSx	SINE/Alu	(15)	297	1	4521827
10034	7.7	10.3	0.3	chrX	119890419	119891837	(36149058)	+	LTR12C	LTR/ERV1	3	1579	(0)	4522072
12	20.4	2.4	2.4	chrX	119999671	119999711	(36041184)	+	(CTTCTG)n	Simple_repeat	1	42	(0)	4522298
22	3.0	0.0	7.5	chrX	119999775	119999814	(36041081)	+	(GGAG)n	Simple_repeat	1	40	(0)	4522299
65	0.0	0.0	0.0	chrX	119999815	119999869	(36041026)	+	(GA)n	Simple_repeat	1	55	(0)	4522300
17	8.1	0.0	0.0	chrX	120560256	120560281	(35480614)	+	(GAG)n	Simple_repeat	1	26	(0)	4523163
13	14.7	3.3	0.0	chrX	120560432	120560461	(35480434)	+	GA-rich	Low_complexity	1	31	(0)	4523164
16	15.5	0.0	0.0	chrX	120560484	120560513	(35480382)	+	(CTG)n	Simple_repeat	1	30	(0)	4523165
13	17.7	1.9	7.5	chrX	120560732	120560783	(35480112)	+	GA-rich	Low_complexity	1	53	(0)	4523166
12	23.9	0.0	2.4	chrX	120561001	120561041	(35479854)	+	G-rich	Low_complexity	1	41	(0)	4523167
48	0.0	0.0	0.0	chrX	123184095	123184135	(32856760)	+	(TC)n	Simple_repeat	1	41	(0)	4526383
31	35.2	2.4	2.8	chrX	123184217	123184422	(32856473)	+	G-rich	Low_complexity	1	211	(0)	4526384
133	18.6	2.4	3.3	chrX	124219816	124220144	(31820751)	+	(CTTT)n	Simple_repeat	1	337	(0)	4528287
407	37.7	6.2	1.3	chrX	124220150	124220185	(31820710)	C	L1ME1	LINE/L1	(292)	5902	5863	4528288
1749	15.9	2.2	2.2	chrX	124220186	124220462	(31820433)	C	AluJo	SINE/Alu	(3)	309	33	4528289
4269	7.7	7.7	2.4	chrX	126985454	126986077	(29054818)	+	PABL_A	LTR/ERV1	1	660	(0)	4531757
31938	8.0	5.8	4.8	chrX	126986078	126987723	(29053172)	+	PABL_A-int	LTR/ERV1	1	1769	(3246)	4531757
832	25.4	8.0	11.4	chrX	127631207	127631935	(28408960)	+	L1MEg	LINE/L1	1069	1770	(4314)	4532458
301	20.1	16.3	0.3	chrX	127631947	127632052	(28408843)	+	MER67D	LTR/ERV1	339	514	(0)	4532460
654	25.4	1.7	2.9	chrX	127632084	127632257	(28408638)	+	MER31-int	LTR/ERV1	15	186	(4750)	4532460
544	34.0	2.0	2.0	chrX	128341612	128341860	(27699035)	+	MLT1O	LTR/ERVL-MaLR	85	333	(209)	4533202
3993	23.5	3.2	2.9	chrX	128341879	128342678	(27698217)	+	L1M4	LINE/L1	105	898	(6722)	4533203
288	32.0	10.0	0.7	chrX	128714310	128714463	(27326432)	+	L1ME3G	LINE/L1	203	372	(552)	4533653
50	16.5	0.0	0.0	chrX	130870873	130870962	(25169933)	+	GA-rich	Low_complexity	1	90	(0)	4537211
433	35.0	7.6	2.5	chrX	132140055	132140543	(23900352)	C	L1M5	LINE/L1	(1082)	5064	4549	4538958
17	4.3	0.0	0.0	chrX	132140600	132140623	(23900272)	+	(TTG)n	Simple_repeat	1	24	(0)	4538959
2233	11.3	0.0	0.0	chrX	132140624	132140905	(23899990)	C	AluSx4	SINE/Alu	(28)	282	1	4538960
36	44.6	0.9	2.3	chrX	132859581	132859888	(23181007)	+	A-rich	Low_complexity	1	303	(0)	4540022
18	20.2	0.0	4.0	chrX	132859895	132859944	(23180951)	+	G-rich	Low_complexity	1	50	(0)	4540023
278	42.4	1.0	2.4	chrX	133549323	133549619	(22491276)	+	L2c	LINE/L2	2789	3081	(338)	4541175
92	31.5	0.6	4.1	chrX	133549620	133549985	(22490910)	+	(TCCC)n	Simple_repeat	1	368	(0)	4541176
2334	10.4	0.3	0.0	chrX	133550006	133550314	(22490581)	C	AluSq2	SINE/Alu	(3)	310	1	4541177
256	25.6	0.0	4.3	chrX	134714305	134714398	(21326497)	+	SVA_F	Retroposon/SVA	1	90	(1285)	4543239
2808	14.2	0.7	1.5	chrX	134714468	134714924	(21325971)	C	L1MB3	LINE/L1	(7)	6176	5724	4543240
18	23.8	5.6	1.3	chrX	135438457	135438527	(20602368)	+	(AGC)n	Simple_repeat	1	75	(0)	4544331
359	32.6	6.6	3.7	chrX	136104713	136105031	(19935864)	C	L2b	LINE/L2	(109)	3278	2942	4545406
106	17.1	4.8	3.6	chrX	136105032	136105323	(19935572)	+	GA-rich	Low_complexity	1	306	(0)	4545407
241	31.0	8.3	5.6	chrX	136105325	136105594	(19935301)	C	L2c	LINE/L2	(78)	3309	3032	4545408
36	0.0	2.7	0.0	chrX	136767835	136767871	(19273024)	+	(GCA)n	Simple_repeat	1	38	(0)	4546544
587	28.4	1.1	1.1	chrX	138865204	138865381	(17175514)	+	MER5B	DNA/hAT-Charlie	1	178	(0)	4549819
86	0.0	6.4	0.0	chrX	138865423	138865516	(17175379)	+	(CT)n	Simple_repeat	1	100	(0)	4549820
8530	11.9	2.2	0.1	chrX	140122288	140123678	(15917217)	C	L1PBa	LINE/L1	(4331)	2532	1113	4551742
1151	14.8	0.5	0.0	chrX	140123670	140123872	(15917023)	C	L1PBa	LINE/L1	(6659)	204	1	4551742
16135	15.5	3.1	0.8	chrX	140123883	140125146	(15915749)	C	L1MA2	LINE/L1	(4474)	3091	1772	4551741
2797	11.9	3.0	0.9	chrX	141002791	141003240	(15037655)	C	LTR46	LTR/ERV1	(0)	460	1	4553136
1859	12.1	0.0	0.8	chrX	145468269	145468517	(10572378)	+	AluSc	SINE/Alu	1	247	(62)	4559219
25060	8.8	3.4	2.5	chrX	145468733	145472420	(10568475)	+	MER61-int	LTR/ERV1	1497	5217	(0)	4559218
107	22.6	3.5	0.0	chrX	148230892	148231150	(7809745)	+	(TC)n	Simple_repeat	1	268	(0)	4563048
793	22.1	3.7	0.6	chrX	149528209	149528390	(6512505)	+	L1MDa	LINE/L1	13	200	(6433)	4564749
354	21.0	2.4	2.4	chrX	149528773	149528855	(6512040)	+	L1MDa	LINE/L1	202	284	(6349)	4564749
21	27.6	0.0	1.6	chrX	149528856	149528917	(6511978)	+	GA-rich	Low_complexity	1	62	(0)	4564750
4011	25.0	5.8	1.1	chrX	149528922	149530125	(6510770)	+	L1MDa	LINE/L1	309	1726	(4907)	4564749
8209	12.1	3.9	3.4	chrX	149825557	149827142	(6213753)	+	HERVIP10FH-int	LTR/ERV1	25	1583	(6202)	4565069
11493	9.4	1.9	2.3	chrX	149827120	149829097	(6211798)	+	HERVIP10FH-int	LTR/ERV1	687	2401	(2701)	4565069
334	28.4	6.8	3.8	chrX	149974948	149975159	(6065736)	C	Tigger14a	DNA/TcMar-Tigger	(54)	270	52	4565234
1072	27.4	10.6	2.4	chrX	151510111	151510492	(4530403)	+	L1M4b	LINE/L1	16	432	(6435)	4567746
3028	15.7	2.5	3.5	chrX	151510575	151511094	(4529801)	+	L1M4	LINE/L1	3196	3713	(2433)	4567747
2052	22.0	6.1	0.3	chrX	152124667	152124816	(3916079)	C	L1MC3	LINE/L1	(1203)	4943	4783	4568544
547	27.7	1.2	2.4	chrX	152124820	152124989	(3915906)	+	MLT1A	LTR/ERVL-MaLR	13	180	(194)	4568547
45	10.9	0.0	0.0	chrX	152125003	152125072	(3915823)	+	(TC)n	Simple_repeat	1	70	(0)	4568548
33	14.1	0.0	0.0	chrX	152125073	152125129	(3915766)	+	(CCTC)n	Simple_repeat	1	57	(0)	4568549
593	23.5	7.9	1.3	chrX	152125134	152125324	(3915571)	+	MLT1A	LTR/ERVL-MaLR	187	390	(0)	4568547
40	28.7	6.2	1.5	chrX	153970428	153970619	(2070276)	+	GA-rich	Low_complexity	1	204	(0)	4570994
13	10.4	2.9	5.6	chrX	153970720	153970754	(2070141)	+	(TGGCCG)n	Simple_repeat	1	36	(0)	4570995
477	26.9	13.2	1.4	chrX	154595414	154595626	(1445269)	+	MER5C	DNA/hAT-Charlie	20	262	(51)	4572140
126	3.8	6.8	0.5	chrX	154595631	154595821	(1445074)	+	(GA)n	Simple_repeat	1	204	(0)	4572141
311	28.7	5.4	8.2	chrX	154595822	154595992	(1444903)	C	L1M6B	LINE/L1	(187)	182	17	4572142
473	17.1	0.0	1.2	chrX	155044057	155044139	(996756)	C	MER58A	DNA/hAT-Charlie	(0)	224	143	4572813
286	21.9	3.0	0.0	chrX	155044136	155044199	(996696)	C	MER58A	DNA/hAT-Charlie	(158)	66	1	4572813
364	30.7	3.8	0.0	chrX	155044216	155044316	(996579)	C	L2	LINE/L2	(628)	2791	2687	4572812
634	24.6	8.7	0.0	chrX	155044325	155044503	(996392)	C	L2	LINE/L2	(1135)	2284	2089	4572812
4386	17.3	3.9	2.8	chrX	155044505	155045479	(995416)	+	L1MA9	LINE/L1	5289	6274	(38)	4572814
149	10.5	1.4	1.4	chrY	10664579	10664856	(46562559)	+	(CCATT)n	Simple_repeat	1	282	(0)	4587925
328	20.6	3.1	0.0	chrY	10686758	10686820	(46540595)	C	FRAM	SINE/Alu	(13)	153	89	4587996
75	7.6	0.0	0.0	chrY	10687986	10688083	(46539332)	+	(ATTCC)n	Simple_repeat	1	98	(0)	4588000
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
314	22.4	2.9	0.0	chrY	10950282	10950348	(46277067)	C	AluYj4	SINE/Alu	(18)	293	225	4588504
235	26.3	10.9	0.0	chrY	10950303	10950359	(46277056)	+	SVA_A	Retroposon/SVA	332	395	(992)	4588505
4917	25.0	0.5	0.3	chrY	10950360	10951162	(46276253)	+	(TCCAC)n	Simple_repeat	1	804	(0)	4588506
754	24.9	0.3	0.6	chrY	10962541	10963548	(46263867)	+	(TTCCA)n	Simple_repeat	2	1010	(0)	4588528
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
757	17.1	2.2	6.1	chrY	11066104	11068189	(46159226)	+	GA-rich	Low_complexity	1	2133	(0)	4588818
780	10.9	0.5	0.6	chrY	11181817	11186194	(46041221)	+	CER	Satellite	1	4374	(0)	4588950
741	17.6	1.4	0.7	chrY	11186186	11186322	(46041093)	+	MLT1A0	LTR/ERVL-MaLR	226	363	(2)	4588951
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157
10957	28.2	0.5	0.1	chrY	26653859	26659290	(30568125)	+	(AATGG)n	Simple_repeat	5	5454	(0)	4607165