3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
454	31.6	2.9	0.0	chr1	7442774	7442906	(241513516)	C	L2b	LINE/L2	(1)	3374	3238	9851
365	34.5	5.2	7.5	chr1	7443041	7443372	(241513050)	+	L2b	LINE/L2	3052	3375	(0)	9852
3603	30.8	3.8	1.6	chr1	12669213	12670382	(236286040)	+	ERVL-E-int	LTR/ERVL	1873	3068	(2599)	20212
3616	29.4	4.3	2.6	chr1	12674390	12675590	(236280832)	C	ERVL-E-int	LTR/ERVL	(2951)	2716	1495	20219
566	27.4	5.6	0.5	chr1	16141273	16141474	(232814948)	C	Charlie16a	DNA/hAT-Charlie	(63)	279	67	26771
597	5.4	0.0	0.0	chr1	16727285	16727358	(232229064)	+	tRNA-Gly-GGG	tRNA	1	74	(0)	28015
4626	23.2	8.4	3.7	chr1	20095194	20096476	(228859946)	+	ERVL-E-int	LTR/ERVL	2303	3652	(2015)	35066
8443	9.4	3.0	3.2	chr1	24891494	24892825	(224063597)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	252	45953
475	11.1	0.0	0.0	chr1	24892818	24892889	(224063533)	+	THE1B	LTR/ERVL-MaLR	224	295	(69)	45954
632	30.2	5.6	0.4	chr1	24892897	24893132	(224063290)	C	ERVL-B4-int	LTR/ERVL	(3070)	2597	2349	45946
722	32.7	8.2	0.0	chr1	24893134	24893402	(224063020)	+	L2a	LINE/L2	3133	3425	(1)	45955
10273	28.9	4.8	2.4	chr1	29335059	29337837	(219618585)	+	ERVL-E-int	LTR/ERVL	1805	4773	(881)	56409
404	28.8	4.8	2.0	chr1	32928071	32928272	(216028150)	C	ERVL-E-int	LTR/ERVL	(328)	5339	5132	64048
258	33.3	3.6	0.0	chr1	32928271	32928378	(216028044)	C	ERVL-E-int	LTR/ERVL	(2861)	2853	2742	64049
1027	28.2	13.9	0.5	chr1	32928667	32928989	(216027433)	C	ERVL-E-int	LTR/ERVL	(3344)	2323	1964	64049
12	15.7	2.6	5.0	chr1	33036893	33036931	(215919491)	+	(ACGC)n	Simple_repeat	1	40	(0)	64297
19	8.1	0.0	0.0	chr1	38328660	38328701	(210627721)	+	(CA)n	Simple_repeat	1	42	(0)	74501
1928	13.7	0.3	1.7	chr1	40720587	40720878	(208235544)	+	AluJo	SINE/Alu	3	290	(22)	79391
253	27.9	6.0	0.0	chr1	40720908	40720986	(208235436)	C	L2a	LINE/L2	(1)	3425	3342	79392
425	33.0	1.8	1.7	chr1	40789198	40789373	(208167049)	C	MIR3	SINE/MIR	(27)	181	7	79505
28564	6.7	1.0	0.5	chr1	42866266	42869799	(206086623)	+	HERVL-int	LTR/ERVL	2104	5654	(0)	83301
1308	24.2	7.8	3.5	chr1	43042224	43042286	(205914136)	+	ERV3-16A3_LTR	LTR/ERVL	1	63	(359)	83652
2270	16.5	6.4	2.5	chr1	43042287	43042734	(205913688)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	83653
1813	25.4	4.2	5.6	chr1	43074451	43074951	(205881471)	C	ERVL-E-int	LTR/ERVL	(2676)	2991	2498	83731
1314	30.8	7.3	7.4	chr1	43074960	43075283	(205881139)	C	ERVL-E-int	LTR/ERVL	(4484)	1183	857	83731
493	26.9	14.6	12.8	chr1	43121209	43121734	(205834688)	C	L1MB3	LINE/L1	(5972)	635	96	83798
2313	12.2	0.0	0.3	chr1	43121735	43122028	(205834394)	C	AluSz6	SINE/Alu	(19)	293	1	83801
3011	32.0	8.2	3.4	chr1	43469877	43471318	(205485104)	C	ERVL-B4-int	LTR/ERVL	(2835)	2879	1362	84355
581	35.5	3.1	3.1	chr1	55651793	55652147	(193304275)	+	L2	LINE/L2	2391	2745	(674)	107492
31171	7.2	1.5	1.6	chr1	55730142	55734486	(193221936)	+	HERVL-int	LTR/ERVL	1312	5652	(2)	107649
43327	6.8	0.4	1.5	chr1	57557525	57562090	(191394332)	+	HERVL-int	LTR/ERVL	2	4519	(1135)	111074
368	37.3	6.8	0.5	chr1	57720241	57720434	(191235988)	C	MIRb	SINE/MIR	(55)	213	7	111377
554	30.1	12.7	1.3	chr1	57720487	57720715	(191235707)	+	MIRb	SINE/MIR	7	265	(3)	111378
492	27.9	4.4	0.4	chr1	59382967	59383137	(189573285)	+	MIRb	SINE/MIR	7	195	(73)	114766
276	36.4	4.1	5.3	chr1	59383152	59383322	(189573100)	+	MER5A	DNA/hAT-Charlie	21	189	(0)	114767
294	26.6	14.9	1.6	chr1	63604670	63604860	(185351562)	C	MLT1J-int	LTR/ERVL-MaLR	(0)	1387	1167	122336
50	0.0	0.0	0.0	chr1	63604918	63604960	(185351462)	+	(TG)n	Simple_repeat	1	43	(0)	122337
1073	26.4	8.9	4.8	chr1	63605092	63605552	(185350870)	C	MLT1J-int	LTR/ERVL-MaLR	(451)	936	455	122336
3017	25.4	10.4	2.8	chr1	66523441	66524803	(182431619)	+	ERVL-E-int	LTR/ERVL	1733	3248	(2419)	127354
4936	16.9	4.0	4.6	chr1	66840709	66841531	(182114891)	C	ERVL-B4-int	LTR/ERVL	(2498)	3216	2386	127851
772	15.8	0.8	5.0	chr1	66841532	66841670	(182114752)	C	FLAM_C	SINE/Alu	(10)	133	1	127852
241	30.7	0.0	9.0	chr1	67118123	67118233	(181838189)	+	LTR78B	LTR/ERV1	4	104	(1192)	128255
513	24.7	22.0	0.9	chr1	67118349	67118581	(181837841)	+	LTR78B	LTR/ERV1	252	547	(749)	128255
1883	19.8	1.5	0.8	chr1	67133538	67133924	(181822498)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	128288
2326	7.3	1.0	1.6	chr1	67134000	67134302	(181822120)	C	AluSx1	SINE/Alu	(11)	301	1	128289
1497	32.4	4.8	1.4	chr1	75288595	75289160	(173667262)	+	ERVL-E-int	LTR/ERVL	2309	2894	(2773)	139748
42361	7.7	1.1	0.4	chr1	77182764	77187777	(171768645)	+	HERVL-int	LTR/ERVL	139	5210	(444)	142474
1156	11.9	6.6	0.0	chr1	77974880	77975064	(170981358)	C	MER2	DNA/TcMar-Tigger	(5)	340	143	143848
4079	22.2	5.8	1.2	chr1	78324799	78325862	(170630560)	C	ERVL-E-int	LTR/ERVL	(717)	4950	3814	144430
1621	24.3	3.3	0.3	chr1	78325858	78326208	(170630214)	C	ERVL-E-int	LTR/ERVL	(3100)	2567	2206	144430
26731	7.5	0.8	0.7	chr1	79930312	79933739	(169022683)	+	HERVL-int	LTR/ERVL	2225	5654	(0)	146508
24	10.8	0.0	0.0	chr1	81801412	81801451	(167154971)	+	(TCTC)n	Simple_repeat	1	40	(0)	149030
2303	9.5	2.2	0.0	chr1	84028393	84028696	(164927726)	+	AluSx1	SINE/Alu	1	311	(1)	151976
272	9.5	0.0	0.0	chr1	84028715	84028756	(164927666)	C	MADE1	DNA/TcMar-Mariner	(34)	46	5	151977
8146	15.7	3.6	1.9	chr1	84028761	84029299	(164927123)	+	ERVL-B4-int	LTR/ERVL	2458	2993	(2721)	151973
1707	33.2	6.1	3.6	chr1	84050841	84051691	(164904731)	+	ERVL-E-int	LTR/ERVL	1688	2560	(3107)	152001
1410	19.8	15.9	0.3	chr1	84051692	84052035	(164904387)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	152002
349	34.4	6.0	6.6	chr1	84718726	84719027	(164237395)	C	MamGypLTR1c	LTR/Gypsy	(11)	792	493	152970
16	16.9	8.3	3.9	chr1	87331365	87331436	(161624986)	+	(CTCCCGT)n	Simple_repeat	1	78	(0)	156912
15	15.5	0.0	5.0	chr1	87331556	87331595	(161624827)	+	G-rich	Low_complexity	1	40	(0)	156913
19	23.8	3.8	3.7	chr1	87331621	87331699	(161624723)	+	GA-rich	Low_complexity	1	82	(0)	156914
526	23.1	3.7	2.3	chr1	87808368	87808500	(161147922)	+	LTR52-int	LTR/ERVL	1723	1857	(1699)	157605
1050	23.1	5.8	3.0	chr1	87808505	87808808	(161147614)	+	LTR52	LTR/ERVL	109	421	(0)	157605
1762	29.9	11.4	4.9	chr1	87808809	87809300	(161147122)	C	L1MEd	LINE/L1	(5584)	1502	974	157606
45372	6.7	0.9	0.4	chr1	88898894	88904109	(160052313)	+	HERVL-int	LTR/ERVL	426	5654	(0)	159188
2163	16.3	10.8	1.7	chr1	89723145	89723562	(159232860)	C	MLT1C	LTR/ERVL-MaLR	(6)	461	1	160237
2206	11.3	0.0	0.3	chr1	90855667	90855967	(158100455)	C	AluSq	SINE/Alu	(13)	300	1	161865
14101	6.9	0.2	1.3	chr1	91042777	91044666	(157911756)	+	HERVL-int	LTR/ERVL	2319	4187	(1467)	162139
29	0.0	0.0	0.0	chr1	93847897	93847923	(155108499)	+	(GCG)n	Simple_repeat	1	27	(0)	166926
305	28.0	3.3	2.5	chr1	93848110	93848230	(155108192)	C	MER5A	DNA/hAT-Charlie	(16)	173	52	166927
2342	9.4	0.3	0.0	chr1	99765320	99765617	(149190805)	+	AluSp	SINE/Alu	1	299	(14)	175322
2399	5.9	0.0	1.4	chr1	99765620	99765906	(149190516)	+	AluYm1	SINE/Alu	1	283	(28)	175323
670	29.4	7.9	4.3	chr1	100661722	100662002	(148294420)	+	L2a	LINE/L2	3135	3426	(0)	176871
1598	27.0	16.5	1.4	chr1	102460479	102461067	(146495355)	C	L1M3c	LINE/L1	(4983)	1158	463	179325
562	28.1	7.8	1.3	chr1	102461072	102461226	(146495196)	C	L1M3c	LINE/L1	(5780)	361	196	179325
1006	15.6	0.6	1.2	chr1	102461227	102461395	(146495027)	C	AluSx	SINE/Alu	(16)	296	129	179326
3822	20.3	2.2	6.7	chr1	102772230	102773104	(146183318)	C	L1MCa	LINE/L1	(5581)	927	94	179751
18	3.7	3.6	0.0	chr1	102773107	102773134	(146183288)	+	(ATTTC)n	Simple_repeat	1	29	(0)	179752
2211	11.5	0.0	0.6	chr1	102773137	102773448	(146182974)	C	AluSp	SINE/Alu	(3)	310	1	179753
38872	7.6	0.8	0.3	chr1	103267223	103272220	(145684202)	+	HERVL-int	LTR/ERVL	2	5022	(632)	180282
30116	10.0	0.6	2.0	chr1	104578578	104582127	(144374295)	C	HERVL-int	LTR/ERVL	(1691)	3963	468	181848
1438	17.6	2.3	18.4	chr1	105468627	105469093	(143487329)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	182875
308	29.2	7.6	1.5	chr1	105469094	105469189	(143487233)	C	L1ME3Cz	LINE/L1	(249)	748	650	182874
1778	35.4	3.6	2.0	chr1	105905364	105906125	(143050297)	C	ERVL-E-int	LTR/ERVL	(2382)	3285	2511	183400
1808	24.9	3.0	2.6	chr1	105906189	105906687	(143049735)	+	MLT1D	LTR/ERVL-MaLR	1	501	(4)	183401
1155	27.9	4.4	0.6	chr1	108065479	108065828	(140890594)	C	ERVL-E-int	LTR/ERVL	(3118)	2549	2186	186303
568	26.2	8.4	3.1	chr1	112685929	112686279	(136270143)	+	MER102c	DNA/hAT-Charlie	62	443	(1985)	193588
199	23.9	22.8	0.0	chr1	112686337	112686407	(136270015)	+	L2b	LINE/L2	1986	2077	(1342)	193589
800	31.2	9.3	4.6	chr1	112686497	112687058	(136269364)	+	L2b	LINE/L2	2261	2851	(568)	193589
42764	6.6	1.3	1.0	chr1	114066556	114071477	(134884945)	C	HERVL-int	LTR/ERVL	(723)	4931	1	196029
299	36.7	1.5	2.9	chr1	115506980	115507184	(133449238)	+	MIRb	SINE/MIR	31	232	(36)	198285
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1739	11.2	6.4	2.6	chr1	151398424	151398723	(97557699)	C	AluJb	SINE/Alu	(0)	312	1	221137
2957	10.1	1.3	6.0	chr1	151907384	151907656	(97048766)	+	LTR76	LTR/ERV1	422	675	(0)	222092
2884	13.7	5.5	1.5	chr1	151907955	151908832	(97047590)	+	MER61-int	LTR/ERV1	247	1272	(3945)	222090
2139	18.9	2.2	6.8	chr1	155636567	155636991	(93319431)	C	HERV17-int	LTR/ERV1	(7690)	567	125	228462
507	30.7	5.9	5.5	chr1	157969696	157969950	(90986472)	C	MIRb	SINE/MIR	(6)	262	7	232436
423	36.7	3.5	0.9	chr1	157969905	157970124	(90986298)	+	L2c	LINE/L2	2745	2970	(449)	232437
2587	30.6	0.9	0.6	chr1	159516161	159516946	(89439476)	C	ERVL-E-int	LTR/ERVL	(2916)	2751	1964	234398
2239	11.7	0.3	0.0	chr1	159655913	159656210	(89300212)	C	AluSx1	SINE/Alu	(13)	299	1	234558
42903	7.0	1.0	0.3	chr1	161434927	161438569	(87517853)	C	HERVL-int	LTR/ERVL	(1967)	3687	1	237531
12908	17.3	2.6	0.1	chr1	164027839	164030043	(84926379)	C	ERVL-B4-int	LTR/ERVL	(2177)	3537	1274	241560
191	31.8	0.0	1.6	chr1	164523456	164523519	(84432903)	C	L2	LINE/L2	(569)	2850	2788	242237
940	10.8	0.8	0.0	chr1	164523520	164523649	(84432773)	+	AluSx3	SINE/Alu	1	131	(180)	242238
454	26.7	14.7	3.5	chr1	164617514	164617711	(84338711)	+	MER103C	DNA/hAT-Charlie	69	292	(5)	242408
3487	20.0	5.1	0.9	chr1	167665067	167665813	(81290609)	C	L1ME1	LINE/L1	(120)	6059	5280	247093
29693	15.9	2.0	1.9	chr1	170937823	170942366	(78014056)	C	ERVL-B4-int	LTR/ERVL	(412)	5302	745	251998
17	16.9	1.9	5.7	chr1	173714998	173715049	(75241373)	+	GA-rich	Low_complexity	1	53	(0)	255989
1644	16.1	1.5	6.4	chr1	175112340	175112598	(73843824)	C	L1PB3	LINE/L1	(3706)	3458	3211	258229
1988	14.0	0.3	1.8	chr1	175112599	175112921	(73843501)	C	AluSz	SINE/Alu	(0)	312	1	258235
44874	6.9	1.5	0.1	chr1	175242967	175248539	(73707883)	+	HERVL-int	LTR/ERVL	1	5654	(0)	258439
181	28.6	10.5	6.3	chr1	182393939	182394065	(66562357)	+	L2c	LINE/L2	3245	3377	(10)	269395
408	21.4	0.0	0.0	chr1	182394086	182394155	(66562267)	C	MamSINE1	SINE/tRNA-RTE	(38)	252	183	269396
38236	9.7	2.7	0.0	chr1	190669590	190675094	(58281328)	C	HERVL-int	LTR/ERVL	(0)	5654	2	281209
24727	13.6	1.5	1.2	chr1	191234763	191240322	(57716100)	+	HERVL-int	LTR/ERVL	1	5654	(0)	281891
17467	15.1	6.0	6.7	chr1	193379150	193381372	(55575050)	C	HERVL-int	LTR/ERVL	(1736)	3918	1644	284783
19	7.3	0.0	0.0	chr1	200669893	200669921	(48286501)	+	(GGAGC)n	Simple_repeat	1	29	(0)	294760
14	10.0	2.8	5.4	chr1	200670033	200670068	(48286354)	+	G-rich	Low_complexity	1	37	(0)	294761
2160	22.6	10.7	4.0	chr1	202682891	202683458	(46272964)	+	L1ME3	LINE/L1	5280	5909	(253)	298307
241	36.2	3.1	0.0	chr1	203751061	203751154	(45205268)	+	MIR3	SINE/MIR	17	113	(95)	300222
2199	13.0	0.0	0.3	chr1	203751385	203751691	(45204731)	C	AluSp	SINE/Alu	(7)	306	1	300223
1520	31.0	3.4	1.5	chr1	204755375	204755921	(44200501)	+	ERVL-E-int	LTR/ERVL	1615	2172	(3495)	302192
189	28.4	1.5	4.3	chr1	204987804	204987873	(43968549)	C	L3	LINE/CR1	(3799)	300	233	302606
2498	8.7	0.0	0.0	chr1	208188427	208188735	(40767687)	+	AluSq	SINE/Alu	1	309	(4)	307742
243	33.0	1.7	3.3	chr1	208188736	208188820	(40767602)	+	MIRc	SINE/MIR	156	238	(30)	307741
1182	34.3	5.8	3.1	chr1	214880842	214882050	(34074372)	C	ERVL-E-int	LTR/ERVL	(2756)	2898	1655	318318
29493	16.4	6.1	1.0	chr1	217310053	217315360	(31641062)	+	ERVL-B4-int	LTR/ERVL	5	5595	(119)	321546
3112	29.5	9.4	3.8	chr1	223414014	223415326	(25541096)	+	L1ME3A	LINE/L1	1862	3257	(2889)	330648
1566	13.9	1.3	13.0	chr1	223415327	223415679	(25540743)	+	AluJb	SINE/Alu	2	312	(0)	330652
1569	26.9	9.1	5.6	chr1	223415680	223416071	(25540351)	+	L1ME3A	LINE/L1	3253	3606	(2540)	330648
2799	20.1	10.2	2.0	chr1	224106414	224107053	(24849369)	C	LTR41	LTR/ERVL	(70)	698	1	331803
1938	13.6	7.4	2.7	chr1	225605612	225605982	(23350440)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	334217
1740	33.2	6.3	8.6	chr1	228128373	228128737	(20827685)	+	ERV24_Prim-int	LTR/ERV1	2872	3234	(4341)	338319
2489	6.4	0.0	0.0	chr1	228128738	228129034	(20827388)	C	AluY	SINE/Alu	(14)	297	1	338329
2327	9.1	0.0	0.0	chr1	228621129	228621435	(20334987)	+	AluY	SINE/Alu	1	307	(4)	338912
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
30037	9.4	1.3	1.2	chr1	232197077	232201638	(16754784)	C	HERVL-int	LTR/ERVL	(0)	5654	1022	344640
219	34.1	7.3	1.8	chr1	232735296	232735462	(16220960)	C	MamRTE1	LINE/RTE-BovB	(410)	3402	3226	345351
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
20	6.1	2.8	2.7	chr1	240109847	240109882	(8846540)	+	(TTA)n	Simple_repeat	1	37	(0)	357163
402	31.2	4.8	3.0	chr1	240110196	240110360	(8846062)	+	MIRc	SINE/MIR	17	184	(84)	357164
221	30.1	7.8	4.6	chr1	241180684	241180770	(7775652)	+	MIR3	SINE/MIR	5	94	(114)	358885
476	29.7	4.4	7.3	chr1	241180760	241180912	(7775510)	+	MIRb	SINE/MIR	11	164	(104)	358886
2719	17.3	0.2	0.2	chr1	241180913	241181393	(7775029)	+	L1MC1	LINE/L1	5852	6332	(1)	358887
23542	16.2	2.0	2.4	chr1	241450793	241455070	(7501352)	C	ERVL-B4-int	LTR/ERVL	(2)	5712	1452	359303
6925	24.4	6.8	8.2	chr1	244006181	244007949	(4948473)	+	ERV3-16A3_I-int	LTR/ERVL	2068	3846	(1380)	363456
396	30.5	6.7	0.0	chr1	245061075	245061245	(3895177)	+	MIRb	SINE/MIR	17	206	(62)	365402
8798	3.3	24.6	0.0	chr1	248944224	248945548	(10874)	+	TAR1	Satellite/telo	314	2069	(42)	371028
676	4.0	0.7	3.4	chr1	248945549	248946422	(10000)	+	(AGGGTT)n	Simple_repeat	1	880	(0)	371029
19	16.5	2.0	3.9	chr10	7234210	7234260	(126563162)	+	A-rich	Low_complexity	1	52	(0)	380708
9955	26.7	4.6	1.9	chr10	13003971	13006665	(120790757)	C	ERVL-E-int	LTR/ERVL	(811)	4856	2087	389946
26658	8.2	1.0	0.4	chr10	16167828	16171514	(117625908)	C	HERVL-int	LTR/ERVL	(1944)	3710	1	395352
2422	15.7	6.6	0.7	chr10	16186687	16187129	(117610293)	+	MER21B	LTR/ERVL	24	494	(374)	395367
2440	14.4	0.0	0.3	chr10	16187137	16187525	(117609897)	C	ERVL-B4-int	LTR/ERVL	(3034)	2723	2336	395366
12950	8.3	0.1	0.1	chr10	16447745	16449379	(117348043)	C	HERVL-int	LTR/ERVL	(1979)	3675	2041	395840
340	26.9	11.2	4.7	chr10	17725510	17725809	(116071613)	C	L1MC5a	LINE/L1	(224)	2553	2232	397911
253	32.8	13.1	4.3	chr10	17725881	17726157	(116071265)	+	MARNA	DNA/TcMar-Mariner	28	332	(254)	397912
1464	32.0	3.1	2.0	chr10	28426133	28426801	(105370621)	+	ERVL-E-int	LTR/ERVL	2143	2842	(2154)	415070
2187	30.8	6.5	5.7	chr10	31739581	31741406	(102056016)	+	ERVL-E-int	LTR/ERVL	967	2830	(2837)	420673
5692	7.1	2.6	5.5	chr10	31969059	31970051	(101827371)	+	SVA_E	Retroposon/SVA	1	862	(520)	421074
32	0.0	0.0	0.0	chr10	31970052	31970081	(101827341)	+	(G)n	Simple_repeat	1	30	(0)	421075
6496	8.0	2.8	6.2	chr10	31970082	31971613	(101825809)	+	SVA_E	Retroposon/SVA	422	1364	(18)	421074
44675	6.7	1.4	1.2	chr10	43510846	43514128	(90283294)	C	HERVL-int	LTR/ERVL	(662)	4992	1731	433712
1702	15.7	6.3	5.6	chr10	48634704	48635081	(85162341)	+	MLT1B	LTR/ERVL-MaLR	7	387	(3)	440813
1952	16.6	4.7	0.0	chr10	52628688	52629031	(81168391)	+	MLT1A0	LTR/ERVL-MaLR	1	361	(4)	446551
40713	9.1	1.1	0.8	chr10	57136796	57140974	(76656448)	+	HERVL-int	LTR/ERVL	1411	5654	(0)	452348
27	22.1	0.0	0.0	chr10	61001044	61001098	(72796324)	+	(GT)n	Simple_repeat	1	55	(0)	457945
12	12.2	3.7	0.0	chr10	61001367	61001393	(72796029)	+	(CGCCA)n	Simple_repeat	1	28	(0)	457946
1696	10.0	0.0	3.4	chr10	61568974	61569212	(72228210)	C	AluSq2	SINE/Alu	(16)	297	67	458750
43473	7.4	1.3	0.5	chr10	61569216	61571867	(72225555)	C	HERVL-int	LTR/ERVL	(2953)	2701	1	458749
19352	14.7	2.6	1.1	chr10	62356338	62358148	(71439274)	+	ERVL-int	LTR/ERVL	2363	4195	(1562)	459938
255	25.6	9.7	5.5	chr10	62983711	62983838	(70813584)	C	L1ME4c	LINE/L1	(62)	768	635	460924
28774	11.3	2.2	0.4	chr10	64888022	64890115	(68907307)	+	HERVL-int	LTR/ERVL	1084	3245	(2409)	464031
445	33.0	5.1	3.6	chr10	64998282	64998735	(68798687)	+	ERVL-E-int	LTR/ERVL	2178	2675	(2321)	464151
497	24.2	0.8	0.8	chr10	64998737	64998857	(68798565)	C	MER5A1	DNA/hAT-Charlie	(3)	163	43	464152
2000	27.9	7.6	5.0	chr10	67298199	67298928	(66498494)	C	ERVL-E-int	LTR/ERVL	(2298)	2928	2257	467298
302	29.7	2.1	1.1	chr10	69820809	69820912	(63976510)	+	MIRb	SINE/MIR	16	126	(142)	472322
538	31.2	1.4	5.5	chr10	69821108	69821324	(63976098)	C	MER102b	DNA/hAT-Charlie	(123)	218	11	472323
376	28.4	1.8	1.9	chr10	69821351	69821487	(63975935)	+	MIR	SINE/MIR	49	190	(40)	472324
392	28.7	2.8	0.8	chr10	71302960	71303114	(62494308)	C	MIR3	SINE/MIR	(21)	187	33	474960
412	26.1	2.7	20.7	chr10	71303344	71303570	(62493852)	+	MER91B	DNA/hAT-Tip100	4	188	(2)	474961
1144	17.4	9.3	1.0	chr10	72092021	72092327	(61705095)	C	Charlie1b	DNA/hAT-Charlie	(1)	522	188	476510
1939	17.5	1.9	5.2	chr10	72092344	72092729	(61704693)	C	MLT1B	LTR/ERVL-MaLR	(9)	381	9	476511
41858	8.8	1.8	0.8	chr10	85030149	85035743	(48761679)	+	HERVL-int	LTR/ERVL	1	5654	(0)	497637
188	32.7	0.0	0.0	chr10	86231894	86231948	(47565474)	+	L2c	LINE/L2	3331	3385	(2)	499169
4279	22.0	9.4	4.7	chr10	87583267	87583970	(46213452)	+	L1MC5a	LINE/L1	116	820	(1957)	501496
3666	9.7	1.9	0.9	chr10	87583971	87584501	(46212921)	C	L1PA11	LINE/L1	(4)	6170	5635	501497
2359	9.0	0.3	0.3	chr10	88902570	88902868	(44894554)	C	AluY	SINE/Alu	(12)	299	1	503541
747	28.4	4.1	1.3	chr10	89328789	89329027	(44468395)	+	L1ME1	LINE/L1	5932	6177	(2)	504201
18885	16.1	1.8	1.6	chr10	90655297	90658465	(43138957)	C	ERVL-int	LTR/ERVL	(12)	5745	2571	506133
6956	19.6	2.5	3.9	chr10	90658468	90660592	(43136830)	+	L1M3f	LINE/L1	1247	3345	(4220)	506134
22176	19.9	4.2	1.6	chr10	90698715	90704136	(43093286)	C	ERVL-B4-int	LTR/ERVL	(50)	5664	1	506185
312	36.7	8.5	2.3	chr10	90726934	90727284	(43070138)	C	L1MEg	LINE/L1	(6268)	818	444	506223
2076	13.1	4.3	2.7	chr10	90727383	90727751	(43069671)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	506224
15	27.3	3.1	1.5	chr10	91798701	91798764	(41998658)	+	(GCCGCG)n	Simple_repeat	1	66	(0)	507864
3524	7.4	5.1	0.2	chr10	92591083	92591570	(41205852)	+	LTR10D	LTR/ERV1	1	513	(0)	509465
45649	6.3	1.1	0.9	chr10	93229338	93234936	(40562486)	C	HERVL-int	LTR/ERVL	(0)	5654	38	510698
342	19.4	2.7	1.4	chr10	93352875	93352947	(40444475)	C	Chap1_Mam	DNA/hAT-Charlie	(174)	168	95	510949
474	13.9	0.0	0.0	chr10	93353019	93353090	(40444332)	C	MER75A	DNA/PiggyBac	(5)	72	1	510950
967	19.8	1.5	5.2	chr10	100192367	100192579	(33604843)	C	Tigger10	DNA/TcMar-Tigger	(12)	1832	1628	522902
44976	6.0	1.1	0.7	chr10	104462634	104468144	(29329278)	+	HERVL-int	LTR/ERVL	1	5537	(117)	530748
428	27.3	14.7	0.0	chr10	112880748	112880875	(20916547)	+	MIRb	SINE/MIR	20	169	(99)	543383
211	31.1	10.5	0.8	chr10	112880915	112881034	(20916388)	C	L2b	LINE/L2	(6)	3369	3237	543384
3359	26.6	8.9	5.1	chr10	115249999	115251477	(18545945)	C	ERV3-16A3_I-int	LTR/ERVL	(1779)	3447	1908	547261
20160	16.1	2.2	0.8	chr10	115272250	115275415	(18522007)	C	ERVL-B4-int	LTR/ERVL	(600)	5114	1894	547281
1498	17.4	0.0	5.6	chr10	116120327	116120614	(17676808)	+	AluJr	SINE/Alu	39	310	(2)	548313
339	31.1	8.0	8.5	chr10	116120615	116121129	(17676293)	+	MamGypLTR3	LTR/Gypsy	436	946	(35)	548312
724	24.3	7.3	1.9	chr10	118106329	118106534	(15690888)	C	MIR	SINE/MIR	(34)	228	11	551565
16	8.7	0.0	0.0	chr10	119726064	119726088	(14071334)	+	(GCC)n	Simple_repeat	1	25	(0)	554474
4155	25.3	12.8	2.9	chr10	120195417	120197076	(13600346)	C	L1MA4A	LINE/L1	(5474)	1735	1	555274
262	30.8	5.5	0.0	chr10	120585569	120585672	(13211750)	C	MIRb	SINE/MIR	(59)	209	100	555886
414	32.6	1.8	2.9	chr10	121041184	121041462	(12755960)	C	L4_A_Mam	LINE/RTE-X	(8)	4982	4657	556545
330	30.1	10.9	2.1	chr10	121041916	121042149	(12755273)	C	MLT1H	LTR/ERVL-MaLR	(257)	292	36	556546
2654	10.4	1.3	0.0	chr10	124211212	124211597	(9585825)	+	LTR47A2	LTR/ERVL	42	432	(0)	561526
1809	21.1	2.2	5.2	chr10	124211598	124212017	(9585405)	C	MLT2C2	LTR/ERVL	(53)	411	5	561527
466	28.5	9.9	4.5	chr10	126132861	126133261	(7664161)	+	L2a	LINE/L2	196	620	(2799)	564472
692	29.1	14.2	1.3	chr10	126133471	126134111	(7663311)	+	L2a	LINE/L2	2680	3426	(0)	564472
31405	14.2	3.0	1.5	chr10	127951106	127952196	(5845226)	+	ERVL-B4-int	LTR/ERVL	1627	2729	(2985)	566845
4270	9.5	1.6	4.5	chr10	127952197	127952824	(5844598)	+	LTR71B	LTR/ERV1	1	610	(0)	566847
5821	22.7	4.7	2.1	chr10	129980648	129981913	(3815509)	+	L1MD1	LINE/L1	312	1759	(5185)	568946
3957	33.2	6.5	4.3	chr10	132033252	132034188	(1763234)	+	ERVL-E-int	LTR/ERVL	1941	2928	(2739)	571249
362	27.9	2.6	0.0	chr10	132210030	132210140	(1587282)	C	Tigger3a	DNA/TcMar-Tigger	(232)	116	3	571416
2001	10.2	3.3	0.0	chr10	132210283	132210547	(1586875)	C	AluSx1	SINE/Alu	(38)	274	1	571417
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
501	26.9	2.1	0.0	chr11	919228	919368	(134167254)	C	MLT1J	LTR/ERVL-MaLR	(365)	147	4	574099
1399	31.2	3.8	2.0	chr11	1361771	1362316	(133724306)	C	ERVL-E-int	LTR/ERVL	(2834)	2833	2278	574528
2303	12.1	0.3	0.0	chr11	1362328	1362633	(133723989)	+	AluSx	SINE/Alu	1	307	(5)	574531
2206	18.5	1.6	0.0	chr11	1377063	1377445	(133709177)	+	MLT1B	LTR/ERVL-MaLR	2	390	(0)	574552
458	28.7	16.4	1.9	chr11	1377447	1377775	(133708847)	C	L2a	LINE/L2	(290)	3136	2749	574553
495	30.9	4.0	1.8	chr11	2247345	2247565	(132839057)	+	HERV16-int	LTR/ERVL	2117	2342	(2884)	575579
1098	31.1	2.5	1.4	chr11	2247590	2247951	(132838671)	+	HERV16-int	LTR/ERVL	2492	2857	(2139)	575579
785	32.7	5.2	5.3	chr11	2247976	2248634	(132837988)	+	HERV16-int	LTR/ERVL	2960	3617	(1609)	575579
1105	24.3	2.4	9.6	chr11	7689033	7689387	(127397235)	+	MLT2C1	LTR/ERVL	1	329	(68)	582959
2616	16.7	2.6	2.6	chr11	7689391	7689857	(127396765)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	582960
452	30.7	6.9	4.0	chr11	12131912	12132133	(122954489)	C	MIRb	SINE/MIR	(16)	246	21	590297
16291	8.0	0.5	0.7	chr11	13479956	13483886	(121602736)	+	L1PA5	LINE/L1	4	3910	(2236)	592430
586	6.0	0.0	0.0	chr11	14650682	14650748	(120435874)	+	AluYi6	SINE/Alu	172	238	(73)	594306
1060	21.3	1.7	1.7	chr11	14650760	14650998	(120435624)	+	MLT1D	LTR/ERVL-MaLR	251	489	(16)	594305
2179	15.4	8.5	5.2	chr11	14650999	14651443	(120435179)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	5	594307
454	26.3	12.0	1.2	chr11	26903685	26903867	(108182755)	+	MIRb	SINE/MIR	3	212	(56)	613118
710	20.4	1.3	6.8	chr11	26904286	26904448	(108182174)	+	MER5A1	DNA/hAT-Charlie	1	154	(12)	613119
6688	8.7	2.1	1.3	chr11	34851603	34852935	(100233687)	+	L1PA13	LINE/L1	4821	6163	(0)	625925
2661	24.5	7.5	0.7	chr11	43874869	43875603	(91211019)	C	ERVL-E-int	LTR/ERVL	(842)	4825	4037	639127
654	30.7	5.4	0.4	chr11	43875633	43875861	(91210761)	C	ERVL-E-int	LTR/ERVL	(2917)	2750	2510	639127
1345	9.3	0.0	0.0	chr11	43875862	43876023	(91210599)	C	AluSx3	SINE/Alu	(17)	294	133	639128
979	27.6	1.1	0.7	chr11	44493267	44493536	(90593086)	+	ERV3-16A3_I-int	LTR/ERVL	1589	1859	(3137)	640226
2214	25.4	4.3	4.4	chr11	44493524	44494352	(90592270)	+	ERV3-16A3_I-int	LTR/ERVL	2418	3330	(2337)	640226
43992	6.5	0.3	0.5	chr11	44544590	44550255	(90536367)	+	HERVL-int	LTR/ERVL	1	5654	(0)	640336
633	29.8	15.3	0.0	chr11	44717820	44718034	(90368588)	+	MIR	SINE/MIR	2	255	(7)	640690
1658	19.6	9.2	3.4	chr11	44718223	44718661	(90367961)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	640691
317	31.4	6.0	2.8	chr11	46945922	46946065	(88140557)	+	LTR67B	LTR/ERVL	409	557	(63)	644966
332	26.7	1.3	0.0	chr11	58004932	58005006	(77081616)	C	MIRb	SINE/MIR	(27)	241	166	654841
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
703	22.8	1.2	3.4	chr11	69172736	69172912	(65913710)	C	LTR33A	LTR/ERVL	(299)	221	49	674637
481	26.5	7.8	6.5	chr11	69172932	69173145	(65913477)	+	L2a	LINE/L2	3080	3296	(130)	674638
2312	32.5	3.1	2.5	chr11	70524189	70525264	(64561358)	+	ERVL-E-int	LTR/ERVL	2175	3257	(2410)	676959
201	34.2	2.5	2.5	chr11	70892583	70892663	(64193959)	+	MIRb	SINE/MIR	37	117	(151)	677516
526	27.9	2.8	1.4	chr11	70892845	70893055	(64193567)	+	LTR16C	LTR/ERVL	265	478	(11)	677517
51	2.1	0.0	0.0	chr11	71574251	71574298	(63512324)	+	(AC)n	Simple_repeat	1	48	(0)	678460
1243	32.8	3.8	1.1	chr11	71574368	71574933	(63511689)	+	ERVL-E-int	LTR/ERVL	2275	2929	(2725)	678459
12083	14.1	1.7	2.8	chr11	73618930	73620962	(61465660)	+	ERVL-B4-int	LTR/ERVL	1513	3523	(2191)	682254
3323	28.1	7.7	8.0	chr11	74912919	74913973	(60172649)	+	ERVL-E-int	LTR/ERVL	1860	2908	(2759)	684983
4520	31.6	6.5	3.5	chr11	75578934	75580506	(59506116)	+	ERVL-E-int	LTR/ERVL	1616	3324	(2330)	686382
373	9.6	0.0	0.0	chr11	76718675	76719199	(58367423)	+	(ACATAT)n	Simple_repeat	1	525	(0)	688541
1276	21.1	8.7	1.6	chr11	77033799	77034107	(58052515)	+	HERVL74-int	LTR/ERVL	1708	2040	(3645)	689129
778	10.2	0.0	0.0	chr11	77034108	77034205	(58052417)	C	AluSx1	SINE/Alu	(102)	210	113	689132
20728	14.6	2.1	3.4	chr11	78608127	78609175	(56477447)	+	ERVL-B4-int	LTR/ERVL	1626	2653	(3061)	692351
2330	9.1	1.3	0.3	chr11	78609176	78609472	(56477150)	C	AluSx1	SINE/Alu	(12)	300	1	692353
19129	14.3	0.4	0.6	chr11	85940994	85943742	(49142880)	+	HERVL18-int	LTR/ERVL	838	3580	(2467)	704661
19399	14.2	4.0	1.3	chr11	93606388	93609488	(41477134)	C	ERVL-B4-int	LTR/ERVL	(7)	5707	2520	715853
11	25.5	2.0	3.9	chr11	93609538	93609588	(41477034)	+	(TTATAA)n	Simple_repeat	1	52	(0)	715854
263	24.7	9.2	4.3	chr11	94000001	94000093	(41086529)	C	L2c	LINE/L2	(21)	3354	3257	716541
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
315	31.1	9.2	2.6	chr11	94512148	94512299	(40574323)	+	MIR	SINE/MIR	34	196	(66)	717252
2188	20.1	3.5	4.0	chr11	103536207	103536730	(31549892)	C	MER73	LTR/ERVL	(0)	644	124	729589
1209	10.5	1.2	0.0	chr11	103536733	103536894	(31549728)	+	AluSx	SINE/Alu	137	300	(12)	729590
271	28.0	5.2	3.7	chr11	107321602	107321750	(27764872)	C	L1M1	LINE/L1	(5991)	1505	1216	734730
35871	9.1	1.6	0.5	chr11	109962087	109967674	(25118948)	+	HERVL-int	LTR/ERVL	1	5654	(0)	739049
6349	10.9	1.5	0.5	chr11	110191871	110193544	(24893078)	+	L1PA16	LINE/L1	5335	7026	(0)	739396
2573	15.8	13.3	1.2	chr11	112594470	112594957	(22491665)	+	MLT2B4	LTR/ERVL	1	556	(0)	743371
222	35.5	3.1	0.0	chr11	113421524	113421616	(21665006)	C	MIRc	SINE/MIR	(160)	108	13	744508
250	30.6	4.0	1.4	chr11	113421671	113421816	(21664806)	+	MamTip3	DNA/hAT-Tip100	70	219	(281)	744509
1613	22.2	2.4	2.4	chr11	114122875	114123248	(20963374)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	745778
516	31.2	12.8	10.7	chr11	114123249	114123286	(20963336)	C	MLT1O	LTR/ERVL-MaLR	(438)	104	65	745777
1799	33.5	9.1	4.2	chr11	116296650	116297461	(18789161)	+	ERVL-E-int	LTR/ERVL	1811	2669	(2998)	749048
2235	19.5	12.0	4.0	chr11	116297499	116297770	(18788852)	C	Charlie10	DNA/hAT-Charlie	(46)	2776	2520	749050
678	31.2	6.2	7.0	chr11	116541515	116541858	(18544764)	C	L2c	LINE/L2	(0)	3387	3047	749521
958	34.5	12.8	8.2	chr11	116541925	116542234	(18544388)	C	L2c	LINE/L2	(469)	2950	2579	749521
329	22.9	1.9	10.3	chr11	123549568	123549684	(11536938)	C	MIR3	SINE/MIR	(21)	187	81	761773
43196	7.1	1.9	0.4	chr11	125029295	125034862	(10051760)	C	HERVL-int	LTR/ERVL	(0)	5654	1	763898
4403	33.1	8.0	6.3	chr11	129630494	129631486	(5455136)	C	ERVL-E-int	LTR/ERVL	(2145)	3522	2491	770590
281	11.9	18.1	0.0	chr11	129631487	129631545	(5455077)	+	L1MB4	LINE/L1	6084	6155	(25)	770593
4403	33.1	8.0	6.3	chr11	129631546	129632500	(5454122)	C	ERVL-E-int	LTR/ERVL	(2145)	2490	1497	770590
575	28.4	9.4	6.1	chr11	134637921	134638280	(448342)	+	LTR41C	LTR/ERVL	322	694	(7)	777482
666	34.9	7.8	2.1	chr11	134638287	134638719	(447903)	+	ERVL-E-int	LTR/ERVL	2431	2890	(2777)	777481
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
2474	11.4	4.6	4.6	chr12	10687487	10687941	(122587368)	+	THE1C	LTR/ERVL-MaLR	1	428	(0)	795541
1024	14.5	1.6	0.6	chr12	10687942	10688121	(122587188)	+	THE1C-int	LTR/ERVL-MaLR	1	182	(1449)	795541
485	7.1	1.4	0.0	chr12	10688126	10688195	(122587114)	+	THE1C	LTR/ERVL-MaLR	311	381	(0)	795541
13896	16.5	1.9	1.2	chr12	10688198	10690704	(122584605)	C	ERVL-B4-int	LTR/ERVL	(3082)	2632	108	795538
1522	27.2	3.4	1.2	chr12	14224922	14225344	(119049965)	+	ERVL-E-int	LTR/ERVL	2088	2608	(3059)	800991
483	27.7	3.3	0.0	chr12	14225354	14225501	(119049808)	+	MER58B	DNA/hAT-Charlie	12	164	(177)	800992
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
1956	10.7	0.0	9.5	chr12	22378654	22378980	(110896329)	C	AluSc	SINE/Alu	(13)	296	1	812028
41345	9.3	1.4	0.6	chr12	25307697	25313307	(107962002)	+	HERVL-int	LTR/ERVL	1	5654	(0)	816294
316	19.4	1.5	0.0	chr12	43252459	43252525	(90022784)	+	MER58D	DNA/hAT-Charlie	293	360	(26)	837819
2272	7.5	0.0	2.5	chr12	43252973	43253284	(90022025)	C	AluY	SINE/Alu	(0)	311	9	837820
11934	29.9	5.1	3.0	chr12	48377147	48378694	(84896615)	+	ERVL-E-int	LTR/ERVL	1854	3475	(2192)	845130
586	20.6	0.8	0.0	chr12	49279394	49279514	(83995795)	C	FLAM_C	SINE/Alu	(5)	128	6	846856
1563	27.9	5.8	4.7	chr12	49279706	49280048	(83995261)	+	MLT1L	LTR/ERVL-MaLR	5	354	(256)	846857
2857	20.9	6.8	0.8	chr12	50963860	50964480	(82310829)	C	ERVL-E-int	LTR/ERVL	(0)	5667	5007	850326
6108	22.1	5.8	3.4	chr12	50964505	50964903	(82310406)	C	ERVL-E-int	LTR/ERVL	(3001)	2666	2267	850326
320	33.5	14.5	2.5	chr12	52205509	52205707	(81069602)	C	MIRb	SINE/MIR	(0)	268	42	852624
1918	16.4	0.3	0.3	chr12	53642886	53643190	(79632119)	+	AluJo	SINE/Alu	1	305	(7)	855156
772	24.5	4.8	0.2	chr12	53643191	53643394	(79631915)	C	LTR8B	LTR/ERV1	(35)	785	576	855155
1076	15.2	3.5	0.0	chr12	53643397	53643561	(79631748)	+	ERVL-B4-int	LTR/ERVL	2556	2726	(2988)	855157
647	14.6	0.0	0.0	chr12	53643566	53643661	(79631648)	C	AluJr4	SINE/Alu	(17)	295	200	855158
2113	29.5	7.0	3.7	chr12	53643663	53643886	(79631423)	+	ERVL-B4-int	LTR/ERVL	2825	3088	(2138)	855157
1476	20.9	9.2	1.4	chr12	54177894	54178252	(79097057)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	855992
28923	11.3	2.1	1.6	chr12	56401326	56404751	(76870558)	+	HERVL-int	LTR/ERVL	1973	5654	(0)	859469
21048	16.8	4.1	4.4	chr12	58151251	58152949	(75122360)	C	ERVL-int	LTR/ERVL	(1542)	4215	2463	862375
182	19.5	6.1	14.4	chr12	58152950	58153039	(75122270)	C	OldhAT1	DNA/hAT-Ac	(1174)	1674	1593	862376
21048	16.8	4.1	4.4	chr12	58153040	58154376	(75120933)	C	ERVL-int	LTR/ERVL	(1542)	2462	1081	862375
44845	6.1	1.9	1.2	chr12	64132184	64134139	(69141170)	C	HERVL-int	LTR/ERVL	(2371)	3283	1371	870542
292	25.3	3.1	1.0	chr12	68489395	68489490	(64785819)	+	L1ME3A	LINE/L1	6048	6145	(97)	877466
15	9.7	0.0	0.0	chr12	68489564	68489585	(64785724)	+	(GA)n	Simple_repeat	1	22	(0)	877471
42504	8.0	1.0	1.0	chr12	73827640	73832153	(59443156)	+	HERVL-int	LTR/ERVL	1126	5654	(0)	885450
5239	26.9	5.0	5.2	chr12	78585440	78587584	(54687725)	C	L1M2	LINE/L1	(4535)	2674	608	892323
20140	7.3	1.8	0.3	chr12	79490830	79493547	(53781762)	C	HERVL-int	LTR/ERVL	(570)	5084	2324	893564
6418	12.2	1.6	0.6	chr12	82204348	82205299	(51070010)	C	HERVL-int	LTR/ERVL	(1328)	4326	3366	897442
18713	12.1	0.7	0.1	chr12	82205289	82207989	(51067320)	C	HERVL-int	LTR/ERVL	(2937)	2717	1	897442
20896	12.5	6.3	5.9	chr12	83117932	83122848	(50152461)	C	L1PB1	LINE/L1	(1756)	5106	6	898703
31074	10.3	1.3	0.2	chr12	86561796	86566138	(46709171)	+	HERVL-int	LTR/ERVL	1	4391	(1263)	903118
376	34.2	2.5	5.2	chr12	93972498	93972707	(39302602)	C	MIRc	SINE/MIR	(47)	221	18	914433
443	29.6	4.4	1.9	chr12	94808330	94808484	(38466825)	C	L2b	LINE/L2	(12)	3363	3205	915875
1085	26.7	6.7	4.3	chr12	94808496	94808576	(38466733)	+	L2a	LINE/L2	3025	3100	(326)	915876
2595	17.5	7.1	0.0	chr12	94808577	94809010	(38466299)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	915877
496	31.1	20.0	4.4	chr12	100110494	100110786	(33164523)	C	L2b	LINE/L2	(7)	3368	3019	924887
34297	6.6	0.5	0.1	chr12	105605213	105609397	(27665912)	C	HERVL-int	LTR/ERVL	(1451)	4203	2	934690
353	34.8	0.0	1.7	chr12	107478354	107478470	(25796839)	+	L2b	LINE/L2	3256	3370	(5)	938242
12	16.9	2.9	2.8	chr12	107478509	107478543	(25796766)	+	(AATT)n	Simple_repeat	1	36	(0)	938243
586	19.8	0.0	0.0	chr12	109252617	109252722	(24022587)	+	MER5A	DNA/hAT-Charlie	8	113	(76)	942123
591	26.2	2.9	1.8	chr12	109252773	109252943	(24022366)	C	MER5B	DNA/hAT-Charlie	(5)	173	1	942124
2363	11.9	0.0	0.0	chr12	110835219	110835529	(22439780)	C	AluSx1	SINE/Alu	(0)	312	2	945679
286	24.0	7.8	13.4	chr12	110835530	110835617	(22439692)	C	MLT1J	LTR/ERVL-MaLR	(414)	98	19	945677
22723	13.7	3.5	2.2	chr12	111128085	111131055	(22144254)	C	ERVL-B4-int	LTR/ERVL	(1783)	3931	898	946353
291	19.0	13.4	2.3	chr12	113744452	113744537	(19530772)	+	MIRc	SINE/MIR	114	210	(58)	952388
309	5.3	0.0	0.0	chr12	113744545	113744582	(19530727)	+	LTR56	LTR/ERV1	351	388	(57)	952389
1608	16.5	12.7	2.0	chr12	113744628	113744979	(19530330)	C	MSTD	LTR/ERVL-MaLR	(1)	395	1	952390
303	32.6	12.9	2.7	chr12	115808775	115809139	(17466170)	+	L2c	LINE/L2	2723	3111	(276)	956826
1862	17.7	15.2	2.0	chr12	115809140	115809543	(17465766)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	956827
22	24.5	4.6	3.3	chr12	115851942	115852028	(17423281)	+	(AT)n	Simple_repeat	1	91	(0)	956921
501	24.8	2.8	2.8	chr12	115920806	115920946	(17354363)	C	MIRc	SINE/MIR	(117)	151	11	957091
1713	30.0	6.3	0.9	chr12	115920970	115921507	(17353802)	+	ERVL-int	LTR/ERVL	2619	3187	(2570)	957092
15	14.4	0.0	0.0	chr12	117577355	117577378	(15697931)	+	(GA)n	Simple_repeat	1	24	(0)	960646
705	27.9	1.0	1.9	chr12	117577426	117577503	(15697806)	C	MIR	SINE/MIR	(32)	230	155	960647
2003	17.1	3.3	3.0	chr12	117577504	117577866	(15697443)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	960648
45626	5.7	0.5	1.2	chr12	117652319	117656327	(15618982)	+	HERVL-int	LTR/ERVL	1570	5554	(100)	960796
1931	13.1	0.0	0.0	chr12	118580689	118580947	(14694362)	+	AluSz6	SINE/Alu	36	294	(18)	962880
2394	13.3	1.3	5.0	chr12	118580948	118581016	(14694293)	+	MLT1B	LTR/ERVL-MaLR	332	390	(0)	962879
532	30.2	4.7	6.0	chr12	118581017	118581170	(14694139)	C	MLT1K	LTR/ERVL-MaLR	(436)	159	5	962878
724	28.0	8.2	0.4	chr12	118581188	118581413	(14693896)	C	MIR	SINE/MIR	(10)	252	8	962881
33013	8.2	0.7	0.6	chr12	120608349	120613810	(12661499)	+	HERVL-int	LTR/ERVL	189	5654	(0)	967506
11	16.5	5.9	0.0	chr12	123105804	123105837	(10169472)	+	GA-rich	Low_complexity	1	36	(0)	973315
2127	13.6	0.7	0.0	chr12	124312317	124312610	(8962699)	C	AluJb	SINE/Alu	(16)	296	1	975873
429	19.0	0.0	0.0	chr12	124624930	124625008	(8650301)	+	MLT1D	LTR/ERVL-MaLR	1	79	(426)	976429
1651	19.1	3.7	9.3	chr12	124625019	124625257	(8650052)	C	MLT1B	LTR/ERVL-MaLR	(10)	380	160	976430
1785	17.8	1.4	1.0	chr12	124625258	124625550	(8649759)	+	AluJo	SINE/Alu	2	295	(17)	976431
702	27.1	5.3	4.0	chr12	124795664	124795963	(8479346)	+	MER113	DNA/hAT-Charlie	83	386	(135)	976848
1856	4.6	4.2	0.2	chr12	127165908	127166171	(6109138)	C	LSU-rRNA_Hsa	rRNA	(1)	5034	4720	981018
1822	15.9	0.0	2.7	chr12	129806744	129807063	(3468246)	+	AluJb	SINE/Alu	1	312	(0)	985673
298	34.2	1.4	6.2	chr12	129807064	129807348	(3467961)	+	MER102c	DNA/hAT-Charlie	75	326	(5)	985674
286	35.4	8.5	2.3	chr12	130442840	130443059	(2832250)	+	L2a	LINE/L2	3192	3426	(0)	986662
982	34.3	5.0	1.7	chr12	130695599	130696067	(2579242)	C	L2	LINE/L2	(542)	2877	2393	987064
311	31.8	6.9	6.9	chr12	130696064	130696323	(2578986)	C	L2c	LINE/L2	(23)	3364	3105	987065
650	27.2	7.3	7.7	chr12	130696337	130696778	(2578531)	C	MER113	DNA/hAT-Charlie	(5)	516	77	987066
19254	15.9	4.9	3.3	chr13	19911359	19912292	(94452036)	+	ERVL-B4-int	LTR/ERVL	1747	2668	(3046)	993370
1920	14.8	0.0	0.3	chr13	19912293	19912633	(94451695)	C	AluJb	SINE/Alu	(0)	312	1	993374
15072	16.8	4.3	2.5	chr13	22928056	22928613	(91435715)	C	ERVL-B4-int	LTR/ERVL	(2904)	2810	2255	998111
1774	12.7	0.0	1.6	chr13	24350240	24350495	(90013833)	C	ERVL-B4-int	LTR/ERVL	(2904)	2810	2559	1000158
11655	18.2	4.0	3.0	chr13	24350490	24350523	(90013805)	C	ERVL-B4-int	LTR/ERVL	(3427)	2287	2255	1000158
1481	16.9	10.9	1.9	chr13	24350524	24350831	(90013497)	+	MER44A	DNA/TcMar-Tigger	1	339	(0)	1000160
1662	34.0	6.1	5.3	chr13	25088456	25089123	(89275205)	+	ERV24B_Prim-int	LTR/ERV1	2754	3419	(4194)	1001274
360	27.8	7.5	6.1	chr13	25152857	25153120	(89211208)	C	LTR16A1	LTR/ERVL	(0)	456	189	1001386
1877	35.0	4.3	0.7	chr13	26941320	26942133	(87422195)	+	ERVL-E-int	LTR/ERVL	2291	3134	(2533)	1004049
22	14.8	3.7	1.8	chr13	31846750	31846803	(82517525)	+	(CGCAG)n	Simple_repeat	1	56	(0)	1011913
12	20.5	2.9	0.0	chr13	31846860	31846893	(82517435)	+	(CGG)n	Simple_repeat	1	35	(0)	1011914
2840	8.2	0.0	0.6	chr13	34430683	34431048	(79933280)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1015769
301	34.5	2.8	6.7	chr13	34431049	34431123	(79933205)	C	MLT1F	LTR/ERVL-MaLR	(432)	159	85	1015768
1185	32.8	8.3	2.9	chr13	34431163	34431809	(79932519)	C	ERVL-E-int	LTR/ERVL	(2946)	2721	2037	1015767
5212	20.3	8.7	3.5	chr13	41007791	41008958	(73355370)	+	Charlie1a	DNA/hAT-Charlie	1	1249	(206)	1025067
1326	20.4	4.9	3.4	chr13	44089107	44089430	(70274898)	+	MLT1A0	LTR/ERVL-MaLR	35	363	(2)	1029762
1959	17.3	0.8	7.4	chr13	44089623	44090040	(70274288)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	1029763
1644	25.2	7.4	1.5	chr13	45384069	45384535	(68979793)	C	ERVL-E-int	LTR/ERVL	(2381)	3286	2790	1032185
789	32.0	1.1	1.1	chr13	45384545	45384831	(68979497)	C	ERVL-E-int	LTR/ERVL	(2996)	2671	2385	1032185
46120	6.4	0.7	0.3	chr13	45753626	45759254	(68605074)	C	HERVL-int	LTR/ERVL	(0)	5654	1	1032782
5481	15.9	10.7	0.3	chr13	61902819	61903829	(52460499)	+	LTR28C	LTR/ERV1	1	1129	(0)	1055341
7633	8.4	19.7	0.0	chr13	62447198	62448462	(51915866)	C	LTR12C	LTR/ERV1	(0)	1579	4	1056019
2619	8.6	0.8	1.3	chr13	62695389	62695764	(51668564)	C	L1PA10	LINE/L1	(2)	6166	5793	1056321
1819	23.8	0.0	0.8	chr13	62767494	62767870	(51596458)	C	MER52A	LTR/ERV1	(0)	1755	1382	1056409
1779	13.4	2.5	0.0	chr13	64966747	64967023	(49397305)	+	L1PA11	LINE/L1	6567	6850	(40)	1059195
273	26.9	11.9	0.0	chr13	64967039	64967142	(49397186)	C	L1MEb	LINE/L1	(1320)	4826	4709	1059197
23822	7.8	1.3	0.4	chr13	65435414	65441515	(48922813)	+	L1PA6	LINE/L1	175	6316	(11)	1059820
354	5.9	0.0	0.0	chr13	66822496	66822546	(47541782)	C	Alu	SINE/Alu	(0)	301	251	1061504
1784	12.7	6.8	0.0	chr13	66822547	66822805	(47541523)	C	AluSz	SINE/Alu	(32)	280	3	1061505
1378	20.7	3.3	7.7	chr13	67371151	67371317	(46993011)	C	MER67C	LTR/ERV1	(309)	402	260	1062192
2696	4.2	0.3	1.3	chr13	67371318	67371629	(46992699)	C	AluYm1	SINE/Alu	(2)	309	1	1062193
8715	12.5	8.6	4.1	chr13	67771971	67773473	(46590855)	C	LTR12C	LTR/ERV1	(0)	1579	3	1062702
3240	9.2	0.4	1.0	chr13	67892809	67893291	(46471037)	+	L1PA8	LINE/L1	5693	6172	(0)	1062841
1926	21.6	3.9	1.6	chr13	67912018	67914966	(46449362)	C	SATR2	Satellite	(168)	2609	1	1062863
1516	21.3	8.9	3.6	chr13	67915011	67915889	(46448439)	C	SATR1	Satellite	(65)	911	1	1062864
6774	18.3	1.4	7.7	chr13	68075095	68076441	(46287887)	+	LTR2752	LTR/ERV1	1	1261	(2)	1063070
3479	23.1	11.4	5.4	chr13	69769407	69770414	(44593914)	+	LTR27E	LTR/ERV1	1	1077	(0)	1065224
633	31.6	4.9	5.3	chr13	70203162	70203757	(44160571)	+	L1ME3D	LINE/L1	5468	6080	(162)	1065828
1042	25.5	12.0	0.9	chr13	70203758	70204074	(44160254)	+	LTR18A	LTR/ERVL	1	357	(0)	1065829
1627	16.8	2.0	4.3	chr13	70528471	70528773	(43835555)	+	AluJo	SINE/Alu	1	296	(16)	1066259
4408	9.8	4.3	0.1	chr13	75282058	75283079	(39081249)	C	L1PB	LINE/L1	(456)	5718	4664	1073098
310	32.6	0.0	0.0	chr13	75283080	75283168	(39081160)	+	L2c	LINE/L2	3299	3387	(0)	1073091
597	22.2	15.0	2.0	chr13	75302663	75302864	(39061464)	C	MIR	SINE/MIR	(2)	260	28	1073121
35	5.4	0.0	0.0	chr13	75480868	75480906	(38883422)	+	(CA)n	Simple_repeat	1	39	(0)	1073408
207	37.5	5.6	2.2	chr13	77948276	77948414	(36415914)	+	MIRb	SINE/MIR	14	157	(111)	1076880
201	28.7	2.2	7.5	chr13	77948565	77948658	(36415670)	C	L2c	LINE/L2	(1880)	1539	1451	1076873
305	24.7	1.3	1.3	chr13	78354470	78354547	(36009781)	C	Tigger13a	DNA/TcMar-Tigger	(17)	754	677	1077396
1058	28.8	11.8	2.4	chr13	78354586	78355123	(36009205)	C	Tigger13a	DNA/TcMar-Tigger	(163)	608	14	1077396
514	35.1	4.6	1.4	chr13	78394402	78394676	(35969652)	+	MER103C	DNA/hAT-Charlie	2	285	(12)	1077465
200	34.4	0.0	5.1	chr13	78394714	78394811	(35969517)	+	MIRc	SINE/MIR	104	196	(72)	1077466
2206	15.6	1.3	4.0	chr13	78394884	78395187	(35969141)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	91	1077467
18532	13.0	1.2	1.4	chr13	82970690	82974475	(31389853)	C	HERVL-int	LTR/ERVL	(0)	5654	1667	1083420
5610	11.4	10.2	11.6	chr13	84893962	84895112	(29469216)	C	LTR12D	LTR/ERV1	(122)	1132	1	1085819
276	19.6	0.0	0.0	chr13	84895113	84895163	(29469165)	+	L1P4a	LINE/L1	1014	1064	(5439)	1085820
1497	20.6	4.8	2.1	chr13	85442759	85443086	(28921242)	+	MLT1A0	LTR/ERVL-MaLR	1	337	(28)	1086558
1774	15.5	0.5	6.2	chr13	85760266	85760666	(28603662)	C	LTR1	LTR/ERV1	(259)	578	190	1086964
445	12.8	7.1	0.0	chr13	85760657	85760734	(28603594)	+	LTR1	LTR/ERV1	534	617	(166)	1086965
191	31.2	5.1	7.9	chr13	85760779	85760879	(28603449)	C	L2	LINE/L2	(2845)	574	477	1086966
891	17.3	1.2	0.6	chr13	85760886	85761048	(28603280)	C	LTR1A1	LTR/ERV1	(0)	799	636	1086967
734	16.9	2.1	4.7	chr13	85761049	85761196	(28603132)	+	AluJb	SINE/Alu	164	307	(5)	1086968
10832	23.8	2.8	0.5	chr13	85945244	85947583	(28416745)	C	ERVL-B4-int	LTR/ERVL	(1114)	4600	2206	1087165
3544	16.3	6.1	2.3	chr13	86316476	86317158	(28047170)	+	MER50	LTR/ERV1	1	710	(24)	1087571
388	31.5	13.1	6.8	chr13	87941932	87942238	(26422090)	C	MER46C	DNA/TcMar-Tigger	(5)	333	5	1089694
69	2.6	2.6	0.0	chr13	87985421	87985497	(26378831)	+	(TATC)n	Simple_repeat	1	79	(0)	1089753
987	20.5	0.0	0.0	chr13	87985501	87985661	(26378667)	C	MER1B	DNA/hAT-Charlie	(178)	161	1	1089754
1308	11.8	5.6	5.9	chr13	87985681	87985950	(26378378)	+	MER4-int	LTR/ERV1	1688	1956	(4642)	1089749
835	18.5	0.0	0.7	chr13	87985951	87986085	(26378243)	+	AluJo	SINE/Alu	1	134	(178)	1089755
12671	19.8	6.1	4.4	chr13	87986087	87989833	(26374495)	+	MER4-int	LTR/ERV1	1461	6284	(314)	1089756
9951	11.8	0.6	0.1	chr13	88281234	88282634	(26081694)	+	HERVL-int	LTR/ERVL	1374	2782	(2872)	1090119
9548	11.6	4.0	1.3	chr13	88282637	88284066	(26080262)	+	HERVL-int	LTR/ERVL	4185	5654	(0)	1090119
4998	25.8	5.4	4.3	chr13	88581289	88582867	(25781461)	+	MER89-int	LTR/ERV1	2547	3910	(2891)	1090489
9729	7.3	9.2	0.8	chr13	89882946	89884388	(24479940)	C	LTR12C	LTR/ERV1	(0)	1579	3	1092225
978	4.1	0.0	0.0	chr13	90153178	90153298	(24211030)	C	L1PA5	LINE/L1	(182)	5972	5852	1092570
20215	9.1	1.2	0.3	chr13	90153311	90156051	(24208277)	C	HERVL-int	LTR/ERVL	(2890)	2764	1	1092571
5630	11.1	1.5	1.7	chr13	90160540	90162084	(24202244)	+	L1PA13	LINE/L1	4621	6160	(3)	1092580
3821	20.6	11.0	6.2	chr13	90575592	90576558	(23787770)	+	LTR28	LTR/ERV1	2	1020	(0)	1093089
1698	20.4	1.0	0.0	chr13	92115970	92116277	(22248051)	+	AluJo	SINE/Alu	2	312	(0)	1095175
1841	15.2	3.6	6.5	chr13	92116278	92116490	(22247838)	+	MLT1B	LTR/ERVL-MaLR	178	390	(0)	1095174
3653	24.9	9.3	3.1	chr13	92116491	92118402	(22245926)	C	L1MD3	LINE/L1	(449)	5730	3685	1095172
786	27.4	8.0	5.3	chr13	94445135	94445676	(19918652)	+	MLT1G	LTR/ERVL-MaLR	11	555	(0)	1098304
25623	22.2	3.6	1.9	chr13	97768180	97773503	(16590825)	C	ERVL-E-int	LTR/ERVL	(243)	5424	5	1103465
552	13.0	6.1	3.1	chr13	100338225	100338351	(14025977)	C	Charlie1a	DNA/hAT-Charlie	(59)	1396	1266	1107812
575	25.9	6.5	3.3	chr13	100338357	100338536	(14025792)	C	Charlie1	DNA/hAT-Charlie	(2594)	187	2	1107813
2459	34.4	6.6	3.6	chr13	107134608	107137041	(7227287)	C	ERVL-E-int	LTR/ERVL	(2648)	3019	480	1117005
1263	25.6	4.2	3.3	chr13	112014497	112014916	(2349412)	C	L1MA9	LINE/L1	(202)	6110	5687	1123068
3457	19.2	4.1	0.1	chr14	27955933	27956588	(79087130)	C	ERVL-B4-int	LTR/ERVL	(2913)	2801	2119	1138683
36045	7.2	0.9	0.0	chr14	29171663	29176239	(77867479)	+	HERVL-int	LTR/ERVL	1035	5654	(0)	1140195
13808	15.5	2.1	0.6	chr14	31975308	31977486	(75066232)	C	ERVL-B4-int	LTR/ERVL	(1200)	4514	2304	1144464
2545	29.1	7.2	5.5	chr14	34317555	34318055	(72725663)	C	ERVL-E-int	LTR/ERVL	(990)	4236	3727	1147568
398	30.4	1.2	0.2	chr14	34318065	34318194	(72725524)	+	ERV3-16A3_I-int	LTR/ERVL	3574	3820	(1847)	1147571
3414	27.1	5.0	3.8	chr14	34318184	34319220	(72724498)	C	ERVL-E-int	LTR/ERVL	(3102)	2565	1515	1147568
2231	8.1	0.0	4.2	chr14	34509478	34509784	(72533934)	+	AluSc8	SINE/Alu	2	295	(16)	1147959
501	25.3	8.5	4.0	chr14	34509790	34509984	(72533734)	+	L1M5	LINE/L1	2869	3085	(3061)	1147960
43622	7.5	1.3	0.1	chr14	39893672	39899252	(67144466)	+	HERVL-int	LTR/ERVL	1	5654	(0)	1156290
19	11.5	2.6	0.0	chr14	50560764	50560801	(56482917)	+	(GGGCGGC)n	Simple_repeat	1	39	(0)	1170157
23233	8.1	0.4	0.6	chr14	51373849	51376815	(55666903)	+	HERVL-int	LTR/ERVL	831	3790	(1864)	1171381
34	0.0	0.0	0.0	chr14	52349778	52349806	(54693912)	+	(AC)n	Simple_repeat	1	29	(0)	1172825
400	30.6	9.2	6.8	chr14	52349862	52350066	(54693652)	+	MLT1O	LTR/ERVL-MaLR	135	334	(208)	1172826
28793	14.2	1.4	1.7	chr14	53557375	53562143	(53481575)	+	ERVL-int	LTR/ERVL	562	5316	(441)	1174689
40078	6.9	1.0	0.8	chr14	57721091	57726728	(49316990)	+	HERVL-int	LTR/ERVL	1	5653	(1)	1181119
736	29.5	8.1	4.5	chr14	61021261	61021618	(46022100)	+	L3	LINE/CR1	3719	4090	(9)	1185881
350	23.0	7.3	12.2	chr14	61021897	61022084	(46021634)	+	MIR3	SINE/MIR	14	191	(17)	1185882
13839	15.6	3.1	2.0	chr14	66930820	66932444	(40111274)	C	L1MA3	LINE/L1	(4385)	3180	1541	1195204
39	0.0	0.0	0.0	chr14	66932445	66932480	(40111238)	+	(T)n	Simple_repeat	1	36	(0)	1195209
13839	15.6	3.1	2.0	chr14	66932481	66932830	(40110888)	C	L1MA3	LINE/L1	(6025)	1540	1170	1195204
3191	20.4	11.5	7.0	chr14	69219530	69220253	(37823465)	C	L1ME3B	LINE/L1	(1599)	4547	3735	1199097
2265	7.1	0.0	0.0	chr14	69220254	69220556	(37823162)	C	AluYc	SINE/Alu	(0)	299	2	1199104
328	24.3	8.3	9.0	chr14	72779970	72780091	(34263627)	+	L2b	LINE/L2	3255	3375	(0)	1204798
13	19.4	4.8	8.1	chr14	74882086	74882168	(32161550)	+	(GGCCG)n	Simple_repeat	1	87	(0)	1209340
40678	7.1	1.3	2.3	chr14	90229743	90232953	(16810765)	+	HERVL-int	LTR/ERVL	2257	5420	(234)	1233521
277	16.7	3.7	11.4	chr14	95080872	95080959	(11962759)	+	L1ME3	LINE/L1	6081	6161	(1)	1242423
396	26.1	14.2	4.5	chr14	95080979	95081243	(11962475)	+	L1ME4b	LINE/L1	592	886	(6)	1242424
383	33.2	2.3	9.2	chr14	95872580	95872808	(11170910)	+	L2c	LINE/L2	3024	3236	(151)	1243871
190	23.1	0.0	0.0	chr14	95872779	95872817	(11170901)	+	L2a	LINE/L2	3386	3424	(2)	1243872
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
1001	26.1	9.6	4.2	chr14	101511051	101511454	(5532264)	+	ERV3-16A3_I-int	LTR/ERVL	2069	2496	(2730)	1253241
739	24.7	5.5	0.5	chr14	101511477	101511700	(5532018)	+	ERV3-16A3_I-int	LTR/ERVL	4977	5212	(14)	1253241
1264	29.6	5.2	1.5	chr14	103149449	103149852	(3893866)	C	ERVL-E-int	LTR/ERVL	(3039)	2628	2209	1256262
916	15.3	1.4	0.0	chr14	103753751	103753887	(3289831)	C	AluJb	SINE/Alu	(15)	297	159	1257401
5886	18.5	8.4	1.5	chr14	104464793	104465980	(2577738)	C	ERVL-B4-int	LTR/ERVL	(983)	4671	3394	1258447
15365	16.9	3.1	2.8	chr14	104465976	104466530	(2577188)	C	ERVL-B4-int	LTR/ERVL	(2905)	2809	2256	1258447
332	33.4	11.1	3.3	chr14	104514298	104514823	(2528895)	C	L2b	LINE/L2	(25)	3350	2790	1258496
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
2328	11.3	0.0	0.0	chr15	29782992	29783291	(72207898)	+	AluSp	SINE/Alu	1	300	(13)	1276004
4963	10.7	7.5	2.5	chr15	29783292	29783959	(72207230)	+	L1PREC2	LINE/L1	5442	6153	(7)	1276003
16	22.7	2.2	0.0	chr15	31813206	31813251	(70177938)	+	(ATGCCG)n	Simple_repeat	1	47	(0)	1279064
365	33.3	3.6	0.7	chr15	35914241	35914376	(66076813)	C	MIR	SINE/MIR	(121)	141	2	1284993
2479	19.5	1.5	2.1	chr15	35914552	35915023	(66076166)	+	MER70A	LTR/ERVL	4	472	(0)	1284994
234	25.0	1.4	1.4	chr15	65285773	65285841	(36705348)	C	MIRc	SINE/MIR	(6)	262	194	1332296
850	33.3	7.8	1.6	chr15	68880367	68880811	(33110378)	+	ERVL-E-int	LTR/ERVL	2275	2756	(2911)	1339235
1770	14.4	3.4	4.6	chr15	68880820	68880870	(33110319)	+	MER44A	DNA/TcMar-Tigger	17	75	(264)	1339238
27431	13.9	2.8	2.1	chr15	69350667	69354654	(32636535)	+	ERVL-B4-int	LTR/ERVL	1704	5714	(0)	1340052
315	31.2	7.2	2.1	chr15	70294921	70295064	(31696125)	+	MIRb	SINE/MIR	101	252	(16)	1341882
464	28.1	3.8	2.5	chr15	70295124	70295280	(31695909)	+	MIR3	SINE/MIR	19	177	(31)	1341883
321	23.2	18.3	2.3	chr15	70295343	70295470	(31695719)	+	MER5B	DNA/hAT-Charlie	1	153	(25)	1341884
11048	18.8	4.2	7.1	chr15	72945737	72947209	(29043980)	+	L1M2	LINE/L1	738	2328	(5238)	1346357
2343	10.8	0.0	0.0	chr15	74496370	74496666	(27494523)	+	AluSx1	SINE/Alu	1	297	(15)	1348935
1181	10.7	14.8	0.0	chr15	74496667	74496741	(27494448)	C	MER30	DNA/hAT-Charlie	(129)	101	2	1348934
6788	23.9	7.0	10.4	chr15	74496742	74497999	(27493190)	C	ERV3-16A3_I-int	LTR/ERVL	(2702)	2524	1247	1348929
278	27.5	8.9	1.1	chr15	74546084	74546206	(27444983)	C	MIR3	SINE/MIR	(100)	130	3	1349060
18	4.0	0.0	0.0	chr15	75844189	75844214	(26146975)	+	(CGGGG)n	Simple_repeat	1	26	(0)	1351620
1643	8.7	0.3	1.1	chr15	76875603	76875872	(25115317)	C	LTR12C	LTR/ERV1	(6)	1573	1355	1353153
3007	9.5	3.3	0.8	chr15	76875868	76876375	(25114814)	C	LTR12C	LTR/ERV1	(1054)	525	5	1353153
701	31.1	8.5	5.6	chr15	79678508	79678564	(22312625)	C	L2c	LINE/L2	(0)	3387	3328	1358207
586	27.3	9.3	1.0	chr15	79678565	79678760	(22312429)	C	MER58C	DNA/hAT-Charlie	(1)	214	1	1358208
701	31.1	8.5	5.6	chr15	79678761	79679080	(22312109)	C	L2c	LINE/L2	(60)	3327	2998	1358207
1059	31.2	5.9	3.6	chr15	83275521	83275954	(18715235)	C	L2a	LINE/L2	(199)	3227	2776	1364349
780	32.4	4.0	5.8	chr15	88725587	88726038	(13265151)	+	CR1_Mam	LINE/CR1	86	529	(1675)	1372901
2387	8.8	0.7	0.0	chr15	90070981	90071277	(11919912)	+	AluSq	SINE/Alu	1	299	(14)	1375543
2363	10.4	1.0	0.0	chr15	90071667	90071973	(11919216)	C	AluSg	SINE/Alu	(0)	310	1	1375544
345	23.1	7.1	0.0	chr15	92445013	92445103	(9546086)	+	MIR3	SINE/MIR	54	151	(57)	1379889
437	28.0	0.0	4.8	chr15	92445104	92445227	(9545962)	+	MER117	DNA/hAT-Charlie	7	124	(73)	1379890
2872	29.7	7.9	3.7	chr15	96828606	96829445	(5161744)	C	ERVL-E-int	LTR/ERVL	(2323)	3344	2476	1386411
4624	21.1	10.1	7.5	chr15	98059984	98061513	(3929676)	C	MSTA-int	LTR/ERVL-MaLR	(5)	1575	3	1388053
396	30.3	5.3	2.1	chr15	98761817	98761961	(3229228)	C	L2b	LINE/L2	(0)	3375	3226	1389130
2334	10.1	0.0	2.2	chr15	101119542	101119859	(871330)	C	AluSx	SINE/Alu	(1)	311	1	1392351
604	30.5	8.4	1.0	chr16	1494903	1495200	(88843145)	+	MER119	DNA/hAT-Charlie	66	387	(196)	1396011
295	17.3	0.0	0.0	chr16	11417406	11417457	(78920888)	+	MLT1C	LTR/ERVL-MaLR	416	467	(0)	1415625
1539	20.4	0.0	3.2	chr16	11446173	11446457	(78891888)	C	AluJo	SINE/Alu	(36)	276	1	1415696
2360	10.6	0.0	0.0	chr16	13562348	13562649	(76775696)	+	AluSx1	SINE/Alu	1	302	(10)	1420363
233	22.6	0.0	3.1	chr16	13562651	13562714	(76775631)	+	MER53	DNA/hAT	132	193	(0)	1420364
16	13.2	0.0	0.0	chr16	13562895	13562919	(76775426)	+	(A)n	Simple_repeat	1	25	(0)	1420365
2204	14.9	2.5	0.0	chr16	23035002	23035356	(67302989)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1441340
1422	26.7	2.8	2.3	chr16	23035357	23035516	(67302829)	+	ERV3-16A3_LTR	LTR/ERVL	231	394	(28)	1441339
880	25.2	4.8	2.9	chr16	23035559	23035762	(67302583)	+	MER58A	DNA/hAT-Charlie	5	212	(12)	1441341
38273	13.0	2.7	0.6	chr16	23992260	23997897	(66340448)	+	ERVL-int	LTR/ERVL	1	5757	(0)	1443630
293	29.4	1.2	2.0	chr16	28846883	28846991	(61491354)	+	MIRb	SINE/MIR	114	220	(10)	1454566
229	27.8	5.3	4.3	chr16	28847187	28847280	(61491065)	+	L2c	LINE/L2	3290	3384	(3)	1454567
15	25.6	0.0	2.1	chr16	31569612	31569659	(58768686)	+	(GCG)n	Simple_repeat	1	48	(0)	1460571
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
321	17.0	0.0	3.8	chr16	34071967	34072019	(56266326)	+	AluSz6	SINE/Alu	227	277	(35)	1463579
384	14.3	3.1	0.0	chr16	34096746	34096808	(56241537)	C	AluY	SINE/Alu	(12)	289	225	1463602
842	30.0	6.3	5.3	chr16	50580585	50581070	(39757275)	+	Charlie8	DNA/hAT-Charlie	1	491	(1937)	1472779
355	29.1	10.1	3.9	chr16	50615391	50615594	(39722751)	C	L2c	LINE/L2	(147)	3240	3023	1472845
239	34.5	2.3	0.0	chr16	50615644	50615727	(39722618)	C	L2c	LINE/L2	(529)	2890	2805	1472845
268	30.2	4.4	0.0	chr16	50615721	50615806	(39722539)	+	MIRb	SINE/MIR	117	206	(62)	1472846
963	25.5	8.8	9.4	chr16	54322184	54322474	(36015871)	+	MER113	DNA/hAT-Charlie	217	515	(6)	1479310
2265	7.3	0.3	6.4	chr16	67816948	67817142	(22521203)	C	AluSc8	SINE/Alu	(1)	310	134	1502421
464	27.9	10.1	1.4	chr16	68528539	68528745	(21809600)	+	MIRb	SINE/MIR	1	227	(41)	1503704
180	29.8	0.0	0.0	chr16	70347201	70347247	(19991098)	+	MamSINE1	SINE/tRNA-RTE	38	84	(206)	1507782
1895	11.1	0.4	0.4	chr16	70526201	70526461	(19811884)	C	AluSg	SINE/Alu	(5)	305	45	1508200
2556	32.7	9.1	3.6	chr16	74015329	74017223	(16321122)	C	ERVL-E-int	LTR/ERVL	(2255)	3459	1451	1513872
2451	5.8	3.2	0.0	chr16	81369596	81369869	(8968476)	C	AluYc	SINE/Alu	(16)	283	1	1527121
969	32.9	1.9	6.4	chr16	81369893	81370331	(8968014)	+	ERVL-E-int	LTR/ERVL	2346	2764	(2903)	1527120
12	10.7	2.9	5.7	chr16	81582843	81582876	(8755469)	+	A-rich	Low_complexity	1	35	(0)	1527575
501	28.6	17.5	1.1	chr16	83990131	83990321	(6348024)	C	MIRb	SINE/MIR	(10)	258	30	1531986
481	25.2	7.2	4.3	chr16	83990711	83990872	(6347473)	+	MIR	SINE/MIR	66	232	(30)	1531987
1130	26.4	16.9	0.8	chr16	85418698	85419194	(4919151)	C	L2	LINE/L2	(616)	2803	2211	1534795
2107	14.8	2.2	0.0	chr16	85419331	85419635	(4918710)	+	AluJo	SINE/Alu	1	312	(0)	1534796
469	33.3	2.7	2.0	chr16	86143599	86143745	(4194600)	+	MIRb	SINE/MIR	87	234	(34)	1536125
1002	33.6	1.6	2.1	chr16	86143862	86144298	(4194047)	+	LTR16C	LTR/ERVL	55	489	(0)	1536127
11	20.1	2.9	0.0	chr16	86897677	86897710	(3440635)	+	(ACAGCC)n	Simple_repeat	1	35	(0)	1537435
266	30.4	4.7	2.8	chr16	86897786	86897914	(3440431)	C	MIRb	SINE/MIR	(128)	140	2	1537433
230	32.0	5.8	4.1	chr16	86897915	86898026	(3440319)	+	L2a	LINE/L2	3289	3426	(0)	1537436
2007	14.4	1.8	0.6	chr16	87193945	87194279	(3144066)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	1537985
1035	29.9	5.4	1.6	chr16	87194500	87194927	(3143418)	C	L1ME4b	LINE/L1	(284)	608	164	1537986
2307	4.6	4.7	0.7	chr17	793207	793491	(82463950)	+	AluY	SINE/Alu	1	297	(14)	1545799
2331	8.6	1.7	0.0	chr17	4564705	4564996	(78692445)	C	AluSx1	SINE/Alu	(15)	297	1	1553316
388	31.0	3.4	3.9	chr17	4564997	4565037	(78692404)	+	ERVL-E-int	LTR/ERVL	2407	2442	(3225)	1553314
2314	12.1	0.0	0.0	chr17	4565045	4565349	(78692092)	C	AluSx	SINE/Alu	(7)	305	1	1553317
561	26.7	4.4	4.4	chr17	4565515	4565718	(78691723)	+	MLT1N2	LTR/ERVL-MaLR	359	562	(0)	1553318
769	11.6	0.0	3.6	chr17	6604991	6605102	(76652339)	+	FLAM_C	SINE/Alu	26	133	(10)	1557396
226	31.7	2.4	0.0	chr17	6605114	6605195	(76652246)	+	HAL1	LINE/L1	1692	1775	(732)	1557389
205	37.4	0.9	0.9	chr17	9175530	9175645	(74081796)	C	MIR3	SINE/MIR	(7)	201	86	1562202
1170	28.0	9.2	3.4	chr17	15498033	15498439	(67759002)	C	MLT1J2	LTR/ERVL-MaLR	(15)	433	1	1573158
1101	16.4	0.0	0.0	chr17	17734292	17734456	(65522985)	+	AluJb	SINE/Alu	131	295	(17)	1577248
386	30.4	1.2	12.0	chr17	17734973	17735056	(65522385)	+	L3	LINE/CR1	3820	3894	(205)	1577249
2210	11.6	0.3	0.0	chr17	19569090	19569381	(63688060)	+	AluSz6	SINE/Alu	1	293	(19)	1580877
225	21.9	3.0	4.5	chr17	19569640	19569706	(63687735)	+	MER5A	DNA/hAT-Charlie	38	103	(86)	1580878
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
758	19.6	13.2	0.5	chr17	29252988	29253192	(54004249)	C	L1ME2	LINE/L1	(8)	6156	5922	1590221
15	21.1	2.9	0.0	chr17	29253262	29253295	(54004146)	+	(AC)n	Simple_repeat	1	35	(0)	1590222
3238	28.3	3.4	4.0	chr17	29936703	29937188	(53320253)	C	ERVL-E-int	LTR/ERVL	(2904)	2763	2274	1591646
2363	8.4	2.9	0.0	chr17	29937189	29937486	(53319955)	C	AluSx	SINE/Alu	(5)	307	1	1591647
288	29.1	2.2	4.3	chr17	30727431	30727570	(52529871)	C	L2	LINE/L2	(779)	2640	2504	1593138
224	19.5	3.5	4.7	chr17	30727828	30727913	(52529528)	C	MIR3	SINE/MIR	(77)	131	47	1593139
1333	10.1	10.3	15.0	chr17	30727959	30728130	(52529311)	C	AluJo	SINE/Alu	(13)	299	123	1593140
27	22.7	1.0	5.2	chr17	31487914	31487941	(51769500)	+	(GGCCCC)n	Simple_repeat	1	68	(29)	1594689
15	13.4	3.5	8.3	chr17	31487942	31487999	(51769442)	+	(GCCCC)n	Simple_repeat	1	60	(0)	1594690
12	21.8	2.7	0.0	chr17	31487982	31488018	(51769423)	+	(GGCCCGA)n	Simple_repeat	1	38	(0)	1594691
27	22.7	1.0	5.2	chr17	31488000	31488009	(51769432)	+	(GGCCCC)n	Simple_repeat	69	97	(0)	1594689
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
6974	12.4	1.7	3.5	chr17	36111840	36113213	(47144228)	+	HERVL-int	LTR/ERVL	1	1352	(4405)	1603423
17706	5.8	1.6	0.0	chr17	36113212	36115348	(47142093)	+	HERVL-int	LTR/ERVL	2491	4663	(991)	1603423
585	29.7	4.3	1.3	chr17	36131698	36131922	(47125519)	+	LTR79	LTR/ERVL	288	519	(8)	1603439
920	34.5	3.5	2.6	chr17	36131939	36132358	(47125083)	+	ERVL-B4-int	LTR/ERVL	2365	2788	(2879)	1603440
2404	10.3	0.0	2.9	chr17	40700589	40700900	(42556541)	C	AluSg	SINE/Alu	(7)	303	1	1612518
1025	18.9	0.0	0.0	chr17	40700903	40701061	(42556380)	C	AluJo	SINE/Alu	(17)	295	137	1612519
3228	28.8	5.2	1.7	chr17	41020103	41021229	(42236212)	C	ERVL-E-int	LTR/ERVL	(2626)	3041	1873	1613030
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
523	32.6	7.8	0.0	chr17	43839328	43839582	(39417859)	+	L1ME4b	LINE/L1	133	373	(519)	1618692
282	23.3	1.6	1.3	chr17	43860878	43860994	(39396447)	C	MIR3	SINE/MIR	(57)	173	66	1618748
983	10.4	0.7	0.7	chr17	44131177	44131311	(39126130)	+	AluSz	SINE/Alu	1	135	(177)	1619283
6706	5.1	1.4	0.9	chr17	46534195	46535048	(36722393)	C	SVA_C	Retroposon/SVA	(0)	1384	527	1624266
27586	15.6	3.8	4.9	chr17	56563287	56566057	(26691384)	+	ERVL-int	LTR/ERVL	990	3760	(1997)	1641493
308	21.2	0.0	5.9	chr17	57273214	57273298	(25984143)	+	MER124	DNA?	155	234	(163)	1643001
18	4.8	0.0	0.0	chr17	57273465	57273486	(25983955)	+	(T)n	Simple_repeat	1	22	(0)	1643002
280	22.2	0.0	0.0	chr17	63966904	63966957	(19290484)	+	Zaphod2	DNA/hAT-Tip100	3467	3520	(4)	1655662
15	33.3	1.2	3.7	chr17	63966958	63967037	(19290404)	+	(TG)n	Simple_repeat	1	81	(0)	1655663
546	31.6	6.4	5.1	chr17	68579030	68579550	(14677891)	+	MamGypLTR1b	LTR/Gypsy	195	772	(10)	1664436
758	28.3	9.8	2.5	chr17	68579571	68579950	(14677491)	C	MLT1I	LTR/ERVL-MaLR	(6)	405	1	1664438
13	15.9	0.0	0.0	chr17	69415043	69415070	(13842371)	+	(TGCA)n	Simple_repeat	1	28	(0)	1665725
448	28.0	1.4	0.0	chr17	71267158	71267300	(11990141)	+	L1MC3	LINE/L1	6012	6156	(1629)	1668520
254	15.0	0.0	0.0	chr17	71267312	71267351	(11990090)	+	MER75A	DNA/PiggyBac	1	40	(37)	1668521
20	7.2	0.0	0.0	chr17	71267354	71267383	(11990058)	+	(TTG)n	Simple_repeat	1	30	(0)	1668522
310	18.3	1.4	1.4	chr17	71267392	71267463	(11989978)	+	L1MC3	LINE/L1	6196	6267	(1728)	1668520
1317	12.9	0.5	2.3	chr17	71267466	71267679	(11989762)	+	L1PA8	LINE/L1	5950	6159	(13)	1668523
335	33.5	1.3	0.7	chr17	72081854	72081997	(11175444)	C	LTR33	LTR/ERVL	(286)	234	88	1669785
1097	31.1	6.1	1.5	chr17	74594885	74595386	(8662055)	C	HERV16-int	LTR/ERVL	(2073)	2923	2265	1674430
62	0.0	0.0	1.7	chr17	74595387	74595446	(8661995)	+	(TTTGT)n	Simple_repeat	1	60	(0)	1674431
1671	15.8	2.1	3.5	chr17	74595447	74595730	(8661711)	C	AluJo	SINE/Alu	(30)	282	3	1674432
2184	12.5	0.0	0.7	chr17	76119842	76120137	(7137304)	C	AluSx1	SINE/Alu	(18)	294	1	1677423
12	21.7	0.0	0.0	chr17	78086876	78086907	(5170534)	+	(GCAGCA)n	Simple_repeat	1	32	(0)	1681181
12	19.9	0.0	0.0	chr17	78086930	78086958	(5170483)	+	(GCC)n	Simple_repeat	1	29	(0)	1681182
597	17.1	5.4	0.0	chr17	78913312	78913416	(4344025)	+	L1MB7	LINE/L1	6060	6170	(14)	1682674
2045	17.9	0.0	0.0	chr17	78913429	78913740	(4343701)	+	AluJb	SINE/Alu	1	312	(0)	1682675
274	28.3	3.9	4.8	chr17	79135947	79136050	(4121391)	C	L3b	LINE/CR1	(207)	5025	4923	1683037
2422	35.2	6.5	4.8	chr17	79203936	79206370	(4051071)	+	ERVL-B4-int	LTR/ERVL	531	3107	(2607)	1683125
333	31.1	2.9	4.9	chr17	79511319	79511460	(3745981)	C	L2c	LINE/L2	(0)	3387	3249	1683521
20	24.4	0.0	0.0	chr17	79939962	79940011	(3317430)	+	(CACG)n	Simple_repeat	1	50	(0)	1684198
14	14.6	0.0	8.9	chr17	80109786	80109830	(3147611)	+	(CAGG)n	Simple_repeat	1	45	(0)	1684474
659	22.5	4.4	1.7	chr17	81792544	81793663	(1463778)	+	(CA)n	Simple_repeat	1	1175	(0)	1686733
12	17.4	1.4	12.0	chr17	81793795	81793868	(1463573)	+	(CCCCCAG)n	Simple_repeat	1	75	(0)	1686734
659	22.5	4.4	1.7	chr17	81793921	81794546	(1462895)	+	(CA)n	Simple_repeat	1	626	(0)	1686735
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
2196	16.6	3.1	3.3	chr18	6644767	6645189	(73728096)	C	MSTB	LTR/ERVL-MaLR	(4)	422	1	1698837
566	35.7	8.7	0.4	chr18	6645259	6645511	(73727774)	+	MamTip2	DNA/hAT-Tip100	2	277	(28)	1698838
7617	22.9	6.1	1.7	chr18	10094867	10096649	(70276636)	+	ERVL-E-int	LTR/ERVL	1776	3638	(2029)	1704127
3391	26.3	5.5	1.6	chr18	12768273	12769946	(67603339)	+	ERVL-E-int	LTR/ERVL	864	2700	(3014)	1708095
3256	21.2	8.6	0.4	chr18	12770027	12770774	(67602511)	+	ERVL-E-int	LTR/ERVL	2738	3552	(2115)	1708095
231	30.1	6.3	6.9	chr18	13295896	13296070	(67077215)	C	MIR3	SINE/MIR	(7)	201	28	1708913
1149	25.4	1.7	2.3	chr18	13296297	13296598	(67076687)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	91	1708914
1377	26.6	3.5	1.8	chr18	24152884	24153335	(56219950)	C	L1MCc	LINE/L1	(5200)	1223	764	1717448
822	19.1	22.5	0.0	chr18	25412896	25413146	(54960139)	C	MER33	DNA/hAT-Charlie	(0)	324	1	1719301
212	28.4	38.8	6.7	chr18	25413147	25413288	(54959997)	C	L2b	LINE/L2	(362)	3013	2826	1719300
1287	27.7	7.6	4.2	chr18	25503363	25503935	(54869350)	C	MLT2F	LTR/ERVL	(69)	594	1	1719422
10108	11.5	2.8	1.1	chr18	32500128	32502217	(47871068)	C	L1PBa1	LINE/L1	(4489)	2374	256	1729448
255	32.1	0.0	0.0	chr18	32502265	32502348	(47870937)	+	ERVL-int	LTR/ERVL	2370	2453	(3214)	1729449
278	28.6	0.0	6.7	chr18	32502450	32502554	(47870731)	C	LTR16A	LTR/ERVL	(1)	450	353	1729450
1207	31.4	6.8	3.5	chr18	32502625	32503182	(47870103)	+	ERVL-int	LTR/ERVL	2862	3510	(2247)	1729449
14381	20.4	3.5	3.0	chr18	33236612	33241429	(47131856)	+	L1MA5A	LINE/L1	729	5640	(1922)	1730471
5306	31.7	7.1	2.8	chr18	33797016	33798448	(46574837)	C	ERVL-E-int	LTR/ERVL	(2408)	3246	1611	1731144
14	11.1	0.0	6.1	chr18	34222908	34222940	(46150345)	+	(CCCT)n	Simple_repeat	1	33	(0)	1731665
44246	7.3	1.8	0.1	chr18	35855492	35861049	(44512236)	+	HERVL-int	LTR/ERVL	1	5654	(0)	1733899
13	8.6	0.0	6.9	chr18	35972700	35972728	(44400557)	+	(GCG)n	Simple_repeat	1	29	(0)	1734074
183	29.9	12.8	6.4	chr18	36638204	36638612	(43734673)	C	L2c	LINE/L2	(253)	3134	2679	1735038
230	30.1	5.1	2.1	chr18	36638619	36638713	(43734572)	+	MER5B	DNA/hAT-Charlie	36	133	(45)	1735039
22035	7.1	0.7	0.3	chr18	37877261	37879995	(42493290)	+	HERVL-int	LTR/ERVL	1	2747	(2907)	1736636
10062	7.5	1.7	1.2	chr18	37879995	37880591	(42492694)	+	HERVL-int	LTR/ERVL	4345	4960	(694)	1736636
1650	29.4	7.4	0.7	chr18	47434178	47434731	(32938554)	+	ERVL-E-int	LTR/ERVL	2187	2780	(2887)	1750193
12	21.2	3.6	5.3	chr18	50283440	50283494	(30089791)	+	(CCCACCT)n	Simple_repeat	1	57	(0)	1754898
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
11789	28.2	3.6	3.1	chr18	59127695	59131245	(21242040)	C	ERVL-E-int	LTR/ERVL	(309)	5358	1789	1768494
25464	10.4	0.7	2.3	chr18	64535030	64536241	(15837044)	C	HERVL-int	LTR/ERVL	(2333)	3321	2119	1776604
28301	6.8	2.3	0.0	chr18	69973064	69976589	(10396696)	C	HERVL-int	LTR/ERVL	(0)	5654	2048	1783936
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
2288	9.1	2.6	0.0	chr19	732930	733225	(57884391)	C	AluSq2	SINE/Alu	(9)	304	1	1797483
238	30.3	11.6	0.8	chr19	733360	733482	(57884134)	C	L2b	LINE/L2	(283)	3092	2955	1797474
265	36.0	11.2	1.3	chr19	1075904	1076215	(57541401)	C	L1MC4a	LINE/L1	(1940)	5942	5596	1798185
238	23.9	0.0	9.9	chr19	1076243	1076363	(57541253)	C	L1ME4b	LINE/L1	(783)	109	1	1798186
381	32.6	7.5	3.5	chr19	1563416	1563644	(57053972)	C	L2b	LINE/L2	(0)	3375	3137	1799030
2164	10.4	3.0	0.0	chr19	2261087	2261373	(56356243)	C	AluSx	SINE/Alu	(16)	296	1	1800414
371	25.2	17.9	3.2	chr19	2261390	2261545	(56356071)	+	MIR	SINE/MIR	4	187	(75)	1800415
1873	16.4	0.0	3.9	chr19	2483326	2483630	(56133986)	+	AluJb	SINE/Alu	3	295	(17)	1800908
474	31.6	5.0	5.9	chr19	2483819	2484258	(56133358)	+	L2b	LINE/L2	2996	3421	(5)	1800909
572	28.8	6.6	3.4	chr19	2484411	2484615	(56133001)	+	MIR	SINE/MIR	51	262	(0)	1800910
1891	13.3	5.8	0.0	chr19	2484971	2485248	(56132368)	C	AluSx1	SINE/Alu	(17)	295	1	1800911
187	14.7	2.9	0.0	chr19	2601188	2601221	(56016395)	C	MIRb	SINE/MIR	(212)	56	22	1801204
245	35.5	1.1	1.1	chr19	2601452	2601545	(56016071)	+	L2b	LINE/L2	3234	3327	(48)	1801205
1915	14.4	4.0	0.3	chr19	2601631	2601921	(56015695)	+	AluJo	SINE/Alu	1	302	(10)	1801206
364	32.9	3.2	0.7	chr19	2827124	2827273	(55790343)	C	MIR	SINE/MIR	(50)	212	59	1801729
519	32.9	7.4	1.3	chr19	3336008	3336235	(55281381)	+	MIRb	SINE/MIR	8	250	(18)	1802974
342	36.9	7.7	1.6	chr19	3336265	3336446	(55281170)	C	L2a	LINE/L2	(15)	3411	3218	1802975
1817	11.2	1.4	10.9	chr19	4532047	4532205	(54085411)	C	AluSq2	SINE/Alu	(22)	291	132	1805799
214	27.8	3.2	7.2	chr19	5218873	5218969	(53398647)	+	MIRc	SINE/MIR	81	173	(95)	1807384
501	26.0	3.4	0.1	chr19	5219086	5219238	(53398378)	+	MIR	SINE/MIR	11	170	(38)	1807385
54	0.0	0.0	0.0	chr19	5287965	5288010	(53329606)	+	(CA)n	Simple_repeat	1	46	(0)	1807579
727	13.4	9.7	0.0	chr19	6407551	6407662	(52209954)	+	FLAM_C	SINE/Alu	1	124	(19)	1810179
937	10.9	0.0	0.0	chr19	6407686	6407841	(52209775)	C	MER2	DNA/TcMar-Tigger	(82)	263	108	1810177
938	13.5	10.3	0.0	chr19	6407843	6407990	(52209626)	+	AluJr	SINE/Alu	137	301	(11)	1810180
532	17.4	5.0	6.5	chr19	6408048	6408099	(52209517)	C	MER2	DNA/TcMar-Tigger	(223)	122	70	1810177
2306	8.4	3.3	0.3	chr19	6408100	6408395	(52209221)	C	AluSq2	SINE/Alu	(7)	306	2	1810181
225	32.6	8.0	0.0	chr19	7170812	7170903	(51446713)	+	L2b	LINE/L2	3269	3368	(7)	1812174
273	19.0	0.0	0.0	chr19	7171227	7171284	(51446332)	C	Alu	SINE/Alu	(1)	300	243	1812175
297	19.9	2.8	1.4	chr19	7171352	7171455	(51446161)	+	MLT1J	LTR/ERVL-MaLR	222	404	(206)	1812176
259	32.8	12.0	2.8	chr19	7336811	7337165	(51280451)	+	L2b	LINE/L2	2585	2976	(443)	1812679
254	31.4	4.2	3.5	chr19	7337208	7337349	(51280267)	+	L2b	LINE/L2	3093	3235	(140)	1812679
407	24.8	0.3	8.8	chr19	7337585	7337753	(51279863)	+	MIR	SINE/MIR	69	215	(47)	1812680
1485	20.3	17.8	5.0	chr19	7383465	7383868	(51233748)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	1812806
1670	11.2	11.3	0.0	chr19	7616935	7617216	(51000400)	C	AluSz	SINE/Alu	(0)	312	1	1813367
1794	12.7	10.1	0.0	chr19	8039781	8040048	(50577568)	+	AluSx1	SINE/Alu	1	298	(14)	1814244
269	34.7	0.8	2.5	chr19	8040078	8040198	(50577418)	+	MIR	SINE/MIR	121	239	(23)	1814245
1277	13.5	0.5	1.4	chr19	8040266	8040476	(50577140)	C	AluSx	SINE/Alu	(0)	312	104	1814246
593	29.2	8.5	0.0	chr19	8115840	8116055	(50501561)	+	MER103C	DNA/hAT-Charlie	2	237	(60)	1814434
213	38.9	25.4	2.5	chr19	8116152	8116387	(50501229)	C	L3	LINE/CR1	(227)	3872	3583	1814435
2198	8.8	0.3	0.7	chr19	8417749	8418063	(50199553)	C	AluSp	SINE/Alu	(0)	313	1	1815264
370	29.7	11.4	0.7	chr19	8599026	8599174	(50018442)	C	MIR	SINE/MIR	(9)	253	87	1815677
17	16.4	3.9	3.7	chr19	8599318	8599343	(50018273)	+	(CTAT)n	Simple_repeat	1	27	(0)	1815678
2410	7.3	0.0	0.0	chr19	8599344	8599630	(50017986)	C	AluSq2	SINE/Alu	(26)	287	1	1815679
26	0.0	0.0	0.0	chr19	8673836	8673860	(49943756)	+	(ATTG)n	Simple_repeat	1	25	(0)	1815892
2234	9.3	0.0	0.0	chr19	8673861	8674139	(49943477)	C	AluSc8	SINE/Alu	(32)	279	1	1815893
3136	11.5	3.2	2.6	chr19	9673926	9674425	(48943191)	C	LTR10F	LTR/ERV1	(7)	504	2	1817896
700	13.8	0.0	0.0	chr19	9674426	9674534	(48943082)	+	AluSx	SINE/Alu	194	302	(10)	1817895
15	25.1	2.2	7.7	chr19	9981570	9981613	(48636003)	+	(ATAC)n	Simple_repeat	1	70	(21)	1818611
12	7.1	5.9	5.6	chr19	9981614	9981647	(48635969)	+	(TACAA)n	Simple_repeat	1	36	(0)	1818612
15	25.1	2.2	7.7	chr19	9981648	9981658	(48635958)	+	(ATAC)n	Simple_repeat	71	91	(0)	1818611
1688	16.1	9.3	0.0	chr19	11168304	11168576	(47449040)	C	AluJo	SINE/Alu	(11)	301	1	1821633
663	23.9	27.1	2.2	chr19	11168577	11168720	(47448896)	+	L2a	LINE/L2	3217	3425	(1)	1821631
204	22.7	19.8	1.0	chr19	11168719	11168816	(47448800)	+	MIR	SINE/MIR	11	131	(131)	1821634
1788	17.6	0.0	2.3	chr19	11168920	11169057	(47448559)	+	AluJr	SINE/Alu	1	133	(179)	1821635
2213	9.8	1.0	1.6	chr19	11199866	11200170	(47417446)	+	AluSx1	SINE/Alu	2	304	(8)	1821716
2079	14.4	0.0	0.0	chr19	11279227	11279532	(47338084)	+	AluSz	SINE/Alu	1	306	(6)	1821917
1227	20.1	2.5	5.9	chr19	11279533	11279753	(47337863)	+	MLT1B	LTR/ERVL-MaLR	177	390	(0)	1821916
431	21.5	1.8	2.7	chr19	11279754	11279861	(47337755)	+	LTR16C	LTR/ERVL	383	489	(0)	1821918
12	17.2	4.9	2.3	chr19	13229144	13229184	(45388432)	+	(CCAGCC)n	Simple_repeat	1	43	(0)	1826197
1922	13.8	0.3	1.7	chr19	13260660	13260950	(45356666)	C	AluJr	SINE/Alu	(25)	287	1	1826281
804	26.5	11.2	0.4	chr19	13260959	13261189	(45356427)	+	MER46C	DNA/TcMar-Tigger	80	338	(0)	1826282
473	11.1	0.0	0.0	chr19	13294161	13294223	(45323393)	+	AluJo	SINE/Alu	240	302	(10)	1826360
394	31.5	6.5	1.4	chr19	13294252	13294396	(45323220)	C	MER20B	DNA/hAT-Charlie	(531)	252	100	1826361
678	15.1	1.1	0.0	chr19	13294395	13294487	(45323129)	C	FLAM_A	SINE/Alu	(48)	94	1	1826362
2201	11.9	1.7	0.3	chr19	13294488	13294782	(45322834)	C	AluSz6	SINE/Alu	(7)	305	7	1826363
409	33.3	6.2	0.6	chr19	13295286	13295454	(45322162)	+	MER20B	DNA/hAT-Charlie	74	252	(531)	1826365
2060	16.0	0.0	1.0	chr19	13295480	13295791	(45321825)	C	AluJr4	SINE/Alu	(0)	312	4	1826366
2070	14.3	0.0	2.5	chr19	13300941	13301255	(45316361)	C	AluJr	SINE/Alu	(5)	307	1	1826380
2224	11.6	2.6	0.0	chr19	13917698	13917999	(44699617)	+	AluSx	SINE/Alu	2	311	(1)	1828122
246	28.3	12.4	2.8	chr19	13918245	13918353	(44699263)	+	MIRb	SINE/MIR	31	151	(117)	1828123
986	18.3	0.0	1.2	chr19	14187953	14188116	(44429500)	+	FRAM	SINE/Alu	5	166	(10)	1828779
259	33.3	1.1	2.1	chr19	14188157	14188251	(44429365)	+	MIR	SINE/MIR	37	130	(132)	1828780
282	34.3	5.3	3.8	chr19	14188507	14188691	(44428925)	+	L2	LINE/L2	2504	2691	(728)	1828781
1906	10.5	0.0	0.4	chr19	14244035	14244282	(44373334)	+	AluSx1	SINE/Alu	39	285	(27)	1828935
33	0.0	0.0	0.0	chr19	14244283	14244313	(44373303)	+	(AAAT)n	Simple_repeat	1	31	(0)	1828936
16	14.2	0.0	0.0	chr19	14244381	14244411	(44373205)	+	(AAAT)n	Simple_repeat	1	31	(0)	1828937
2320	11.6	0.0	0.0	chr19	14244609	14244910	(44372706)	C	AluSq2	SINE/Alu	(11)	302	1	1828938
228	29.9	7.5	0.0	chr19	16253687	16253773	(42363843)	C	MIR3	SINE/MIR	(63)	145	52	1833496
236	24.4	5.8	0.0	chr19	16254118	16254199	(42363417)	+	MIRb	SINE/MIR	2	88	(180)	1833497
2356	8.8	2.3	0.0	chr19	16254225	16254521	(42363095)	C	AluSz	SINE/Alu	(8)	304	1	1833498
13	11.9	2.3	8.9	chr19	16897842	16897885	(41719731)	+	G-rich	Low_complexity	1	45	(0)	1835033
5333	9.6	1.2	3.8	chr19	16958122	16958786	(41658830)	C	L1PREC2	LINE/L1	(0)	6160	5493	1835162
218	34.2	3.2	2.2	chr19	18119418	18119586	(40498030)	+	MIR1_Amn	SINE/MIR	49	218	(50)	1838152
2139	14.3	1.3	0.0	chr19	19107351	19107658	(39509958)	+	AluSx	SINE/Alu	1	312	(0)	1840272
2178	11.2	0.0	0.0	chr19	36167310	36167594	(22450022)	+	AluSx3	SINE/Alu	2	286	(25)	1862011
1803	28.6	1.5	1.5	chr19	36167611	36168089	(22449527)	C	ERVL-E-int	LTR/ERVL	(2854)	2813	2335	1861994
1959	16.8	0.3	0.0	chr19	36168112	36168415	(22449201)	C	AluSz	SINE/Alu	(7)	305	1	1862012
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
11512	1.7	0.0	2.1	chr19	37288824	37290419	(21327197)	C	SST1	Satellite/centr	(0)	1563	1	1864177
18	8.5	0.0	0.0	chr19	38667333	38667357	(19950259)	+	(TG)n	Simple_repeat	1	25	(0)	1867209
299	35.2	5.8	3.6	chr19	50272762	50272979	(8344637)	+	MIR	SINE/MIR	8	222	(40)	1893156
2239	12.0	0.0	0.0	chr19	50304308	50304599	(8313017)	+	AluSx1	SINE/Alu	1	292	(20)	1893239
242	17.4	0.0	4.2	chr19	50663863	50663910	(7953706)	C	LTR56	LTR/ERV1	(51)	394	349	1894044
1064	21.2	0.0	0.5	chr19	50663929	50664121	(7953495)	C	AluJb	SINE/Alu	(1)	311	120	1894045
366	28.2	3.5	4.3	chr19	50716021	50716135	(7901481)	C	MIR3	SINE/MIR	(60)	148	35	1894153
875	10.9	5.2	0.0	chr19	53792615	53792742	(4824874)	C	AluSx	SINE/Alu	(176)	136	2	1900253
253	18.6	2.8	6.7	chr19	53793051	53793125	(4824491)	C	MER20	DNA/hAT-Charlie	(63)	156	85	1900254
11870	20.5	5.7	3.0	chr19	54568509	54571051	(4046565)	+	ERVL-B4-int	LTR/ERVL	15	2629	(3085)	1902009
583	21.6	0.7	0.7	chr19	54873467	54873601	(3744015)	+	L1PB4	LINE/L1	6022	6156	(0)	1902431
438	16.7	0.0	2.6	chr19	54873980	54874057	(3743559)	+	AluJr	SINE/Alu	50	125	(187)	1902432
31	22.5	6.0	1.6	chr19	55466127	55466206	(3151410)	+	(TCTA)n	Simple_repeat	1	84	(0)	1903786
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
38964	6.7	2.3	0.1	chr19	57195090	57199946	(1417670)	C	HERVL-int	LTR/ERVL	(2)	5652	688	1907416
1506	27.3	4.5	2.9	chr2	3267103	3267691	(238925838)	+	ERVL-B4-int	LTR/ERVL	2040	2638	(3076)	1914248
611	20.9	9.2	4.3	chr2	3267698	3267882	(238925647)	+	MER58C	DNA/hAT-Charlie	19	213	(2)	1914249
28	0.0	0.0	0.0	chr2	3738541	3738570	(238454959)	+	(A)n	Simple_repeat	1	30	(0)	1914900
32544	20.9	1.9	1.6	chr2	6838364	6846789	(235346740)	C	HUERS-P3-int	LTR/ERV1	(224)	8695	262	1919104
213	23.9	6.6	0.0	chr2	8279132	8279202	(233914327)	C	MIR1_Amn	SINE/MIR	(79)	151	76	1921133
346	29.5	5.9	2.6	chr2	8279288	8279402	(233914127)	C	L2a	LINE/L2	(4)	3422	3304	1921134
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
192	26.8	5.1	0.0	chr2	42907808	42907863	(199285666)	C	MIR3	SINE/MIR	(1)	207	149	1976527
582	23.4	14.7	0.0	chr2	42908056	42908175	(199285354)	+	MLT1L	LTR/ERVL-MaLR	165	296	(314)	1976528
1586	18.9	1.6	2.6	chr2	42908176	42908481	(199285048)	+	AluJb	SINE/Alu	1	303	(9)	1976529
787	30.4	2.7	2.3	chr2	46973765	46974023	(195219506)	C	LTR38-int	LTR/ERV1	(1412)	374	115	1983177
3238	14.2	4.1	5.2	chr2	46974089	46974706	(195218823)	C	LTR36	LTR/ERV1	(0)	611	1	1983178
16	18.9	0.0	0.0	chr2	47344983	47345018	(194848511)	+	A-rich	Low_complexity	1	36	(0)	1983862
1386	31.9	1.5	1.5	chr2	48062805	48063275	(194130254)	+	ERVL-E-int	LTR/ERVL	2215	2685	(2982)	1985295
840	26.1	5.2	3.3	chr2	48063285	48063778	(194129751)	C	MLT1G3	LTR/ERVL-MaLR	(7)	588	11	1985303
1080	27.2	14.9	7.0	chr2	54756737	54758015	(187435514)	C	HAL1	LINE/L1	(1076)	1431	34	1994795
11488	19.0	4.0	2.8	chr2	55973485	55975858	(186217671)	C	ERVL-B4-int	LTR/ERVL	(2358)	2868	551	1996830
55	0.0	0.0	0.0	chr2	58617764	58617810	(183575719)	+	(AC)n	Simple_repeat	1	47	(0)	2000041
16	0.0	0.0	0.0	chr2	58618011	58618028	(183575501)	+	(TG)n	Simple_repeat	1	18	(0)	2000042
60	10.4	1.1	0.0	chr2	58618029	58618123	(183575406)	+	(TA)n	Simple_repeat	1	96	(0)	2000043
314	28.6	7.5	4.2	chr2	67995282	67995449	(174198080)	+	MER103C	DNA/hAT-Charlie	67	240	(57)	2014885
5638	19.4	5.1	1.9	chr2	67995515	67996811	(174196718)	+	Charlie1a	DNA/hAT-Charlie	1	1340	(115)	2014886
1093	20.6	5.8	6.0	chr2	72254172	72254556	(169938973)	+	MLT1D	LTR/ERVL-MaLR	34	467	(0)	2021800
2520	24.7	5.2	6.2	chr2	72254557	72255898	(169937631)	+	MLT1D-int	LTR/ERVL-MaLR	1	1489	(0)	2021800
1374	28.1	6.9	8.0	chr2	82088109	82088803	(160104726)	C	MER89-int	LTR/ERV1	(4369)	3244	2548	2035835
2859	26.0	3.1	1.9	chr2	82088942	82089711	(160103818)	C	MER89-int	LTR/ERV1	(4270)	2531	1753	2035835
2574	6.1	0.0	0.3	chr2	85651711	85652020	(156541509)	C	AluY	SINE/Alu	(0)	311	3	2041225
1953	25.6	4.3	6.9	chr2	85652021	85652391	(156541138)	C	ERVL-E-int	LTR/ERVL	(2900)	2767	2409	2041224
1577	14.3	11.0	0.0	chr2	85652392	85652657	(156540872)	+	AluJo	SINE/Alu	3	301	(11)	2041226
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
302	31.5	11.3	2.9	chr2	99179310	99179479	(143014050)	+	MIRb	SINE/MIR	54	239	(29)	2056020
2508	6.4	0.0	1.0	chr2	99179567	99179863	(143013666)	C	AluSc	SINE/Alu	(15)	294	1	2056021
402	34.2	17.0	2.0	chr2	102512308	102512701	(139680828)	+	L3	LINE/CR1	3605	4069	(30)	2061171
36445	8.0	0.9	0.3	chr2	102909642	102914619	(139278910)	C	HERVL-int	LTR/ERVL	(647)	5007	1	2061697
13	15.4	2.5	4.9	chr2	113583676	113583715	(128609814)	+	G-rich	Low_complexity	1	41	(0)	2077016
1224	32.3	5.7	2.6	chr2	120619874	120620982	(121572547)	C	ERVL-B4-int	LTR/ERVL	(2270)	3444	2143	2087289
2252	9.5	8.7	2.2	chr2	121106114	121106469	(121087060)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2088056
428	20.9	1.8	0.0	chr2	121106716	121106825	(121086704)	+	L1MC5	LINE/L1	9184	9295	(9)	2088057
8504	20.4	2.7	2.4	chr2	123494320	123495814	(118697715)	+	ERVL-B4-int	LTR/ERVL	2026	3518	(2196)	2091836
44431	7.2	1.6	0.1	chr2	126646416	126651983	(115541546)	C	HERVL-int	LTR/ERVL	(0)	5654	1	2096188
20520	16.6	3.1	2.1	chr2	129398200	129400434	(112793095)	+	ERVL-B4-int	LTR/ERVL	565	2829	(2885)	2100399
10678	25.1	7.4	2.9	chr2	133962531	133966928	(108226601)	+	ERVL-B4-int	LTR/ERVL	1020	5713	(1)	2106719
254	14.3	0.0	0.0	chr2	138053517	138053563	(104139966)	C	MER45A	DNA/hAT-Tip100	(3)	175	129	2112914
2428	34.2	8.0	2.5	chr2	146450637	146452060	(95741469)	C	ERVL-E-int	LTR/ERVL	(2343)	3324	1816	2123940
30442	10.2	1.1	0.1	chr2	146775208	146780811	(95412718)	+	HERVL-int	LTR/ERVL	1	5653	(1)	2124334
29909	7.8	0.5	0.2	chr2	150830379	150836013	(91357516)	C	HERVL-int	LTR/ERVL	(0)	5654	1	2129931
25737	17.1	4.0	2.1	chr2	155923046	155927646	(86265883)	C	ERVL-int	LTR/ERVL	(1067)	4690	2	2136752
525	29.0	7.1	6.1	chr2	161070898	161071161	(81122368)	+	MLT1I	LTR/ERVL-MaLR	7	273	(138)	2143921
481	20.6	0.0	1.1	chr2	161071174	161071266	(81122263)	+	MLT1I	LTR/ERVL-MaLR	320	411	(0)	2143921
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
2119	28.1	9.7	3.6	chr2	162080418	162081418	(80112111)	C	ERVL-E-int	LTR/ERVL	(2459)	3208	2047	2145203
399	27.1	8.3	1.8	chr2	164561644	164561812	(77631717)	+	MIRb	SINE/MIR	40	220	(48)	2148447
26871	14.3	1.7	0.6	chr2	168258541	168263450	(73930079)	+	ERVL-B4-int	LTR/ERVL	650	5654	(0)	2153298
1270	17.2	14.6	1.5	chr2	168504129	168504389	(73689140)	+	AluJo	SINE/Alu	1	301	(11)	2153648
2399	33.7	4.7	5.7	chr2	168504390	168504784	(73688745)	C	PRIMA4-int	LTR/ERV1	(4502)	3768	3365	2153646
25975	10.3	3.6	2.5	chr2	182394507	182396445	(59797084)	+	HERVL-int	LTR/ERVL	1895	3905	(1749)	2173887
18	20.2	3.9	0.0	chr2	186693990	186694040	(55499489)	+	(CTCCTC)n	Simple_repeat	1	53	(0)	2179447
13	18.3	2.6	2.5	chr2	186694092	186694138	(55499391)	+	(CGCCGCC)n	Simple_repeat	1	47	(0)	2179448
24	22.8	0.0	0.0	chr2	186694300	186694356	(55499173)	+	(CAG)n	Simple_repeat	1	57	(0)	2179449
54	0.0	0.0	0.0	chr2	186694749	186694794	(55498735)	+	(AC)n	Simple_repeat	1	46	(0)	2179450
22026	8.9	0.7	0.8	chr2	187181799	187182201	(55011328)	C	HERVL-int	LTR/ERVL	(2701)	2953	2564	2180066
14202	8.0	1.2	0.4	chr2	187182201	187184155	(55009374)	C	HERVL-int	LTR/ERVL	(3683)	1971	1	2180066
16	21.9	5.7	0.0	chr2	194826524	194826576	(47366953)	+	(ATAA)n	Simple_repeat	1	56	(0)	2190142
330	29.7	16.4	4.0	chr2	194826630	194826878	(47366651)	C	LTR79	LTR/ERVL	(194)	333	48	2190143
1985	27.9	7.0	2.0	chr2	194826871	194827577	(47365952)	+	Kanga1a	DNA/TcMar-Tc2	7	751	(3)	2190144
2535	15.5	15.0	3.1	chr2	194924715	194925293	(47268236)	C	LTR9C	LTR/ERV1	(6)	660	1	2190262
1771	13.2	6.3	3.8	chr2	198123674	198123965	(44069564)	+	MER1B	DNA/hAT-Charlie	36	335	(4)	2195069
414	8.9	0.0	0.0	chr2	198123969	198124024	(44069505)	+	MLT1B	LTR/ERVL-MaLR	335	390	(0)	2195068
290	22.4	3.8	0.0	chr2	200365197	200365272	(41828257)	C	MIRb	SINE/MIR	(58)	210	132	2198226
225	34.6	2.4	0.0	chr2	200365280	200365360	(41828169)	C	MIRc	SINE/MIR	(74)	194	112	2198227
13224	14.7	2.4	1.4	chr2	201567836	201569900	(40623629)	C	ERVL-B4-int	LTR/ERVL	(2541)	3173	1084	2200247
1632	32.4	7.1	7.1	chr2	212805252	212806356	(29387173)	+	ERV3-16A3_I-int	LTR/ERVL	1841	2997	(2229)	2217448
42816	8.2	1.4	0.0	chr2	213469597	213474750	(28718779)	C	HERVL-int	LTR/ERVL	(423)	5231	2	2218260
26	19.2	0.0	0.0	chr2	215397287	215397340	(26796189)	+	(CCTC)n	Simple_repeat	1	54	(0)	2221027
2071	13.4	2.2	0.7	chr2	221150345	221150651	(21042878)	+	AluSx1	SINE/Alu	1	312	(0)	2230623
1539	16.5	4.3	8.7	chr2	221150652	221150937	(21042592)	C	MLT1A	LTR/ERVL-MaLR	(91)	283	1	2230622
29817	6.2	1.2	0.0	chr2	222435480	222439361	(19754168)	C	HERVL-int	LTR/ERVL	(0)	5654	1727	2232599
337	23.9	2.1	0.0	chr2	231848548	231848637	(10344892)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247744
371	22.8	2.1	0.0	chr2	231848638	231848727	(10344802)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247744
361	22.8	2.1	0.0	chr2	231848765	231848856	(10344673)	+	MER20	DNA/hAT-Charlie	126	219	(0)	2247745
343	24.2	2.1	0.0	chr2	231848894	231848984	(10344545)	+	MER20	DNA/hAT-Charlie	126	218	(1)	2247746
30	8.5	1.9	1.9	chr2	234509694	234509745	(7683784)	+	(CT)n	Simple_repeat	1	53	(0)	2252090
328	15.2	1.7	0.0	chr2	236190608	236190666	(6002863)	+	MER5A1	DNA/hAT-Charlie	68	127	(39)	2254642
484	24.2	7.3	5.0	chr2	236191139	236191299	(6002230)	C	MamRep488	DNA/hAT-Tip100	(0)	219	55	2254643
430	29.6	3.3	2.8	chr2	236718028	236718208	(5475321)	+	L1M6B	LINE/L1	4	185	(184)	2255396
264	23.9	5.3	1.4	chr2	236718404	236718475	(5475054)	+	MER5B	DNA/hAT-Charlie	91	165	(13)	2255397
1725	16.7	0.0	5.2	chr2	236723643	236723948	(5469581)	C	AluJb	SINE/Alu	(21)	291	2	2255407
189	28.0	0.0	0.0	chr2	236724068	236724117	(5469412)	+	L2a	LINE/L2	3355	3404	(22)	2255408
527	27.7	2.0	0.0	chr2	236724222	236724369	(5469160)	C	MER5A1	DNA/hAT-Charlie	(14)	152	2	2255409
470	28.4	10.4	3.7	chr2	236724385	236724545	(5468984)	+	MIRb	SINE/MIR	73	245	(23)	2255410
15298	20.4	3.9	2.2	chr2	237243990	237247012	(4946517)	C	HERVL-int	LTR/ERVL	(1)	5653	2578	2256129
756	14.7	3.0	0.0	chr2	237247001	237247129	(4946400)	C	ERVL-B4-int	LTR/ERVL	(4578)	1136	1004	2256130
7794	2.6	0.1	0.0	chr2	237247141	237248766	(4944763)	C	L1PA3	LINE/L1	(0)	6155	4528	2256131
953	31.0	7.3	4.0	chr2	237477803	237478330	(4715199)	C	ERVL-E-int	LTR/ERVL	(2609)	3058	2404	2256415
1888	32.2	3.6	2.1	chr2	237478352	237479142	(4714387)	C	ERVL-E-int	LTR/ERVL	(3758)	1909	1107	2256415
596	28.0	6.7	5.6	chr2	237696499	237696748	(4496781)	C	MIRb	SINE/MIR	(8)	260	8	2256737
14	28.9	0.0	0.0	chr2	237696786	237696828	(4496701)	+	(GCT)n	Simple_repeat	1	43	(0)	2256738
357	30.3	3.3	3.3	chr2	240990043	240990192	(1203337)	+	MIRb	SINE/MIR	89	238	(30)	2260563
427	19.3	11.9	0.0	chr2	240990377	240990495	(1203034)	C	MIR3	SINE/MIR	(0)	208	74	2260564
2114	10.6	0.0	5.0	chr2	240990545	240990570	(1202959)	C	AluSx1	SINE/Alu	(7)	305	280	2260565
397	31.6	4.1	5.4	chr20	3678678	3678898	(60765269)	+	MIRc	SINE/MIR	12	229	(39)	2269295
323	17.2	4.5	0.0	chr20	3679057	3679120	(60765047)	+	Arthur1B	DNA/hAT-Tip100	70	136	(1089)	2269296
19	16.9	0.0	0.0	chr20	3679122	3679154	(60765013)	+	(T)n	Simple_repeat	1	33	(0)	2269297
14	18.4	0.0	0.0	chr20	3679236	3679266	(60764901)	+	G-rich	Low_complexity	1	31	(0)	2269298
2460	10.0	0.3	0.0	chr20	5490086	5490395	(58953772)	C	AluSp	SINE/Alu	(1)	312	2	2272634
3677	28.7	4.4	1.8	chr20	5490396	5490856	(58953311)	C	ERVL-E-int	LTR/ERVL	(3042)	2625	2153	2272633
14343	17.5	3.3	1.1	chr20	8836475	8839500	(55604667)	+	ERVL-B4-int	LTR/ERVL	5	3155	(2559)	2277907
248	25.7	0.0	0.0	chr20	9335463	9335532	(55108635)	C	MADE2	DNA/TcMar-Mariner	(2)	78	9	2278763
374	35.6	2.6	1.0	chr20	9335606	9335772	(55108395)	C	MIRb	SINE/MIR	(45)	223	45	2278764
253	26.2	10.8	0.9	chr20	17536771	17536886	(46907281)	+	MIR3	SINE/MIR	48	183	(25)	2291057
620	19.0	11.7	0.0	chr20	17536887	17537007	(46907160)	+	MLT1B	LTR/ERVL-MaLR	1	137	(253)	2291058
315	8.7	2.1	0.0	chr20	17537004	17537049	(46907118)	+	MLT1B	LTR/ERVL-MaLR	344	390	(0)	2291059
22738	13.8	2.4	1.5	chr20	25124983	25128147	(39316020)	+	ERVL-B4-int	LTR/ERVL	2312	5505	(209)	2301738
252	6.8	18.5	0.0	chr20	25407154	25407197	(39036970)	+	MIR	SINE/MIR	79	132	(130)	2302119
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
8063	19.7	6.6	2.5	chr20	28565013	28565466	(35878701)	C	LTR53-int	LTR/ERVL	(1471)	1858	1390	2303595
1942	20.6	9.7	0.9	chr20	28565467	28565898	(35878269)	C	MLT2B1	LTR/ERVL	(46)	474	1	2303597
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
576	28.1	8.8	0.4	chr20	38583143	38583381	(25860786)	C	MIRb	SINE/MIR	(0)	268	8	2322418
615	25.7	7.9	0.0	chr20	38583334	38583520	(25860647)	+	MIR	SINE/MIR	36	238	(24)	2322419
375	27.1	4.8	2.5	chr20	40879486	40879606	(23564561)	+	LTR85a	LTR/Gypsy?	1	124	(578)	2326613
3879	15.4	3.4	3.0	chr20	43777636	43778339	(20665828)	+	L1MC2	LINE/L1	5627	6333	(11)	2331968
2184	13.8	0.0	0.3	chr20	48273576	48273880	(16170287)	C	AluSx	SINE/Alu	(4)	308	5	2341790
200	27.4	4.6	1.6	chr20	48274108	48274170	(16169997)	+	MIR1_Amn	SINE/MIR	77	141	(89)	2341791
13	15.2	0.0	3.2	chr20	48274218	48274248	(16169919)	+	(TTATT)n	Simple_repeat	1	31	(0)	2341792
250	25.9	5.5	0.0	chr20	48274251	48274335	(16169832)	C	Charlie15a	DNA/hAT-Charlie	(17)	207	118	2341793
1913	27.7	1.4	1.8	chr20	48611470	48612072	(15832095)	C	ERVL-B4-int	LTR/ERVL	(2923)	2791	2021	2342451
585	23.5	4.2	3.2	chr20	52790894	52791082	(11653085)	C	LTR33	LTR/ERVL	(53)	462	272	2352197
486	25.5	5.0	7.3	chr20	52791324	52791488	(11652679)	+	MIRb	SINE/MIR	81	241	(27)	2352198
12	22.3	0.0	7.4	chr20	54185036	54185089	(10259078)	+	(CACACC)n	Simple_repeat	1	54	(0)	2355223
428	33.6	11.2	4.0	chr20	58509829	58510309	(5933858)	+	L2c	LINE/L2	2823	3367	(8)	2363053
2200	10.3	3.0	0.0	chr20	58510342	58510631	(5933536)	C	AluSx1	SINE/Alu	(13)	299	1	2363054
418	24.8	2.3	3.0	chr20	61603663	61603795	(2840372)	C	L2c	LINE/L2	(178)	3209	3078	2367566
14	21.7	3.0	5.9	chr20	61603930	61603995	(2840172)	+	(CACATG)n	Simple_repeat	1	68	(0)	2367568
481	31.8	2.9	3.4	chr20	61916292	61916496	(2527671)	+	MIRb	SINE/MIR	54	257	(11)	2367897
22	22.6	0.0	0.0	chr20	61916507	61916558	(2527609)	+	(TCA)n	Simple_repeat	1	52	(0)	2367898
2055	12.2	2.7	1.4	chr20	63632640	63632933	(811234)	+	AluSx	SINE/Alu	1	298	(14)	2369800
741	29.7	4.7	5.0	chr20	63632936	63633250	(810917)	C	ERV24B_Prim-int	LTR/ERV1	(4375)	3238	2916	2369801
2311	12.1	0.0	0.0	chr20	63633251	63633557	(810610)	C	AluSq2	SINE/Alu	(6)	307	1	2369802
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
15708	0.1	0.0	0.0	chr21	8436876	8438744	(38271239)	+	SSU-rRNA_Hsa	rRNA	1	1869	(0)	2373613
13	8.1	3.6	3.5	chr21	8438766	8438793	(38271190)	+	(CCG)n	Simple_repeat	1	29	(0)	2373614
12	18.8	2.6	2.6	chr21	8438825	8438862	(38271121)	+	(CGCGTG)n	Simple_repeat	1	39	(0)	2373615
16	8.3	0.0	0.0	chr21	8438857	8438882	(38271101)	+	(CGTT)n	Simple_repeat	1	26	(0)	2373616
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
19	33.9	0.0	1.2	chr21	9812172	9812228	(36897755)	+	(GACA)n	Simple_repeat	1	86	(0)	2374882
18	10.4	0.0	0.0	chr21	9812229	9812259	(36897724)	+	(ACACAC)n	Simple_repeat	1	31	(0)	2374883
1892	29.2	5.1	6.4	chr21	9812264	9813560	(36896423)	C	SST1	Satellite/centr	(1)	1562	284	2374884
1951	29.8	4.7	5.4	chr21	9816509	9817787	(36892196)	C	SST1	Satellite/centr	(11)	1552	284	2374893
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
41668	8.1	1.7	1.9	chr21	15576961	15582627	(31127356)	+	HERVL-int	LTR/ERVL	1	5654	(0)	2379318
23922	7.7	1.2	0.3	chr21	27316674	27320145	(19389838)	C	HERVL-int	LTR/ERVL	(2085)	3569	1	2395254
26061	8.9	0.7	0.4	chr21	28850807	28854444	(17855539)	C	HERVL-int	LTR/ERVL	(2002)	3652	1	2397344
1326	25.6	4.0	4.7	chr21	33158554	33159000	(13550983)	+	MLT1G3	LTR/ERVL-MaLR	14	461	(118)	2404408
446	28.6	5.5	7.2	chr21	33158987	33159208	(13550775)	+	LTR85c	LTR/Gypsy?	387	604	(219)	2404409
13	13.7	0.0	0.0	chr21	33864246	33864270	(12845713)	+	(TCCA)n	Simple_repeat	1	25	(0)	2405738
395	33.6	6.3	4.5	chr21	33864609	33864873	(12845110)	C	Tigger19a	DNA/TcMar-Tigger	(35)	288	19	2405739
2238	16.4	5.2	0.7	chr21	34185836	34186276	(12523707)	+	MLT1C	LTR/ERVL-MaLR	2	463	(4)	2406239
12	11.1	6.9	0.0	chr21	34933684	34933712	(11776271)	+	(GCACT)n	Simple_repeat	1	31	(0)	2407372
406	31.1	10.0	1.6	chr21	34933941	34934123	(11775860)	+	LTR16D	LTR/ERVL	224	423	(228)	2407373
1097	19.8	1.4	1.4	chr21	35962755	35962964	(10747019)	C	MER20	DNA/hAT-Charlie	(0)	219	10	2408910
1242	32.8	7.8	2.5	chr21	35962982	35963692	(10746291)	C	HERVL-int	LTR/ERVL	(2938)	2776	2006	2408909
2130	11.9	1.3	0.0	chr21	37579027	37579320	(9130663)	C	AluSc	SINE/Alu	(10)	299	2	2411823
1274	28.2	4.6	5.9	chr21	37579321	37579542	(9130441)	C	L1MEf	LINE/L1	(5480)	1557	1119	2411822
9711	13.6	1.7	0.8	chr21	38227979	38229403	(8480580)	C	HERV3-int	LTR/ERV1	(6987)	1439	2	2412761
1428	21.9	5.0	3.9	chr21	38229404	38229805	(8480178)	C	LTR76	LTR/ERV1	(0)	675	214	2412761
2117	18.7	1.3	1.5	chr21	38461073	38461463	(8248520)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	2413052
293	24.4	3.4	1.1	chr21	38461466	38461552	(8248431)	+	L2b	LINE/L2	3265	3353	(22)	2413053
605	19.6	2.9	4.3	chr21	38996894	38997032	(7712951)	C	L1MC1	LINE/L1	(0)	6333	6197	2413832
21355	17.4	2.2	0.6	chr21	40917868	40921536	(5788447)	+	ERVL-B4-int	LTR/ERVL	28	3756	(1958)	2416715
417	23.2	9.8	1.4	chr21	42388184	42388323	(4321660)	+	MIRb	SINE/MIR	75	227	(41)	2418807
3130	16.2	2.5	4.5	chr21	44876429	44877118	(1832865)	+	ERV24B_Prim-int	LTR/ERV1	2299	3273	(4340)	2422273
2201	12.6	1.0	0.0	chr21	44877119	44877420	(1832563)	C	AluSp	SINE/Alu	(8)	305	1	2422275
17	19.3	4.3	0.0	chr21	45996558	45996604	(713379)	+	(CACAGG)n	Simple_repeat	1	49	(0)	2423398
2928	21.9	9.7	2.3	chr21	46094126	46094981	(615002)	C	ERV3-16A3_I-int	LTR/ERVL	(2153)	3073	2148	2423502
1494	26.9	2.7	3.9	chr21	46095034	46095517	(614466)	C	ERV3-16A3_I-int	LTR/ERVL	(3169)	2057	1580	2423502
3329	16.1	1.8	0.9	chr21	46608052	46608602	(101381)	C	MER41D	LTR/ERV1	(0)	557	2	2424176
2078	29.2	19.2	1.1	chr21	46608603	46609198	(100785)	+	ERVL-B4-int	LTR/ERVL	2328	3025	(2689)	2424175
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
3134	12.3	0.8	0.0	chr22	11930604	11931100	(38887368)	+	L1PA13	LINE/L1	5175	5675	(1091)	2425549
290	22.2	1.5	0.5	chr22	11932477	11932565	(38885903)	C	L1P4	LINE/L1	(1123)	5023	4933	2425553
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
4341	4.4	0.2	0.0	chr22	18890645	18891207	(31927261)	C	HSATI	Satellite	(10)	567	4	2431162
36	2.7	13.3	0.0	chr22	18891210	18891284	(31927184)	+	(AT)n	Simple_repeat	1	85	(0)	2431163
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
2079	9.9	0.8	0.0	chr22	19303600	19303862	(31514606)	C	AluSc	SINE/Alu	(34)	275	11	2431764
6924	12.8	2.6	6.9	chr22	19303863	19304075	(31514393)	+	PRIMAX-int	LTR/ERV1	1788	1988	(2114)	2431757
1640	16.3	1.5	1.8	chr22	19304077	19304248	(31514220)	C	AluJo	SINE/Alu	(19)	293	120	2431765
1627	16.9	2.1	7.1	chr22	20377753	20378060	(30440408)	+	AluSx1	SINE/Alu	2	293	(19)	2433199
2201	12.2	0.0	0.0	chr22	21853060	21853354	(28965114)	+	AluSx	SINE/Alu	11	305	(7)	2436050
728	25.1	8.7	2.5	chr22	21853355	21853686	(28964782)	+	L1MD	LINE/L1	3579	3928	(2218)	2436049
211	23.9	14.5	0.0	chr22	21967161	21967231	(28851237)	+	MIR	SINE/MIR	19	101	(161)	2436284
15315	9.6	1.0	0.8	chr22	22388387	22389982	(28428486)	C	HERVL-int	LTR/ERVL	(1772)	3882	2270	2436807
2405	7.4	0.0	2.6	chr22	22764833	22765143	(28053325)	C	AluY	SINE/Alu	(8)	303	1	2437357
810	30.6	11.2	4.3	chr22	22765144	22765274	(28053194)	C	ERVL-E-int	LTR/ERVL	(2810)	2857	2719	2437356
495	37.8	2.8	0.6	chr22	22765315	22765631	(28052837)	C	ERVL-E-int	LTR/ERVL	(2293)	2703	2380	2437356
12625	8.1	0.2	1.2	chr22	22794422	22794901	(28023567)	+	HERVL-int	LTR/ERVL	2190	2669	(2985)	2437404
2287	10.2	0.0	0.0	chr22	22794902	22795195	(28023273)	C	AluSc	SINE/Alu	(15)	294	1	2437405
210	31.7	6.1	8.0	chr22	23091760	23092009	(27726459)	+	L2	LINE/L2	2837	3081	(338)	2437750
2063	13.7	0.3	1.3	chr22	25082551	25082856	(25735612)	+	AluJo	SINE/Alu	1	303	(9)	2441424
684	26.6	8.8	1.3	chr22	25920986	25921217	(24897251)	C	MIRb	SINE/MIR	(0)	268	18	2443160
15	5.5	0.0	0.0	chr22	27377869	27377887	(23440581)	+	(T)n	Simple_repeat	1	19	(0)	2446545
723	25.3	4.9	0.8	chr22	27377941	27378175	(23440293)	C	MIRb	SINE/MIR	(19)	249	5	2446546
196	31.9	14.2	0.0	chr22	27579128	27579218	(23239250)	C	L2a	LINE/L2	(9)	3417	3312	2447018
17	18.2	10.5	1.2	chr22	27595957	27596032	(23222436)	+	(CTCTTCCTC)n	Simple_repeat	1	84	(0)	2447055
663	29.1	3.7	1.9	chr22	27596094	27596303	(23222165)	+	MIR	SINE/MIR	39	252	(10)	2447056
478	28.1	2.2	3.2	chr22	30434073	30434253	(20384215)	+	MIRb	SINE/MIR	2	178	(90)	2452603
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
13	18.9	3.8	3.6	chr22	38973962	38973984	(11844484)	+	(TTGCTTT)n	Simple_repeat	1	24	(0)	2470624
2218	13.3	0.0	0.9	chr22	38973985	38974299	(11844169)	C	AluSz	SINE/Alu	(0)	312	1	2470625
44232	5.5	0.7	0.8	chr22	45556296	45561682	(5256786)	C	HERVL-int	LTR/ERVL	(274)	5380	1	2484161
14271	16.1	3.0	1.4	chr22	45855956	45858440	(4960028)	C	ERVL-B4-int	LTR/ERVL	(1315)	4399	1874	2484654
733	31.1	9.0	1.1	chr22	49676017	49676634	(1141834)	C	ERVL-E-int	LTR/ERVL	(2335)	2891	2361	2489623
685	29.7	5.9	0.5	chr3	10521794	10522016	(187773543)	C	MIRb	SINE/MIR	(9)	259	24	2509590
479	26.2	0.0	0.0	chr3	10522313	10522419	(187773140)	C	MIRb	SINE/MIR	(139)	129	23	2509591
8818	8.1	18.5	0.1	chr3	11510875	11512160	(186783399)	C	LTR12C	LTR/ERV1	(0)	1579	3	2511585
1121	27.3	9.5	0.0	chr3	14538241	14538584	(183756975)	+	MLT1K	LTR/ERVL-MaLR	124	503	(92)	2517153
8982	9.6	13.1	0.1	chr3	19702400	19703772	(178591787)	+	LTR12C	LTR/ERV1	2	1579	(0)	2524975
14983	8.4	1.4	0.1	chr3	20875538	20877490	(177418069)	C	HERVL-int	LTR/ERVL	(1136)	4518	2540	2526712
2825	5.3	3.6	0.0	chr3	20877473	20877846	(177417713)	+	HERVL-int	LTR/ERVL	5267	5654	(0)	2526710
7773	18.4	6.4	4.3	chr3	25672875	25674906	(172620653)	C	MER52A	LTR/ERV1	(0)	2123	10	2533644
1041	23.4	14.2	5.4	chr3	25674908	25675186	(172620373)	+	L1ME3A	LINE/L1	5639	5921	(252)	2533643
1262	4.0	0.0	0.0	chr3	29439610	29439759	(168855800)	C	L1PA3	LINE/L1	(2)	6153	6004	2539174
1886	16.1	0.7	0.7	chr3	41984634	41984937	(156310622)	C	AluJo	SINE/Alu	(8)	304	1	2558312
2151	33.3	4.2	2.4	chr3	41984938	41985637	(156309922)	+	ERVL-E-int	LTR/ERVL	2284	2997	(2670)	2558313
2056	12.2	0.0	1.7	chr3	42125848	42126143	(156169416)	C	AluSz	SINE/Alu	(9)	303	13	2558603
44115	7.1	1.7	0.7	chr3	48005375	48007676	(150287883)	+	HERVL-int	LTR/ERVL	953	3289	(2365)	2568427
464	28.5	3.1	6.5	chr3	61466863	61467125	(136828434)	C	X8_LINE	LINE/CR1	(42)	254	1	2590629
302	33.3	0.0	0.0	chr3	63772927	63773007	(134522552)	C	L2a	LINE/L2	(7)	3419	3339	2594625
277	35.6	10.7	4.1	chr3	63773157	63773399	(134522160)	C	L2c	LINE/L2	(1)	3386	3126	2594626
351	34.2	10.4	1.6	chr3	64827507	64827699	(133467860)	+	MIRb	SINE/MIR	35	246	(22)	2596416
260	22.4	2.3	3.4	chr3	64827755	64827842	(133467717)	+	Charlie4z	DNA/hAT-Charlie	17	103	(64)	2596417
485	18.9	18.6	1.6	chr3	66008211	66008339	(132287220)	+	MER5A1	DNA/hAT-Charlie	2	157	(9)	2598460
297	32.2	6.4	9.0	chr3	66008473	66008762	(132286797)	C	L2c	LINE/L2	(77)	3310	3029	2598461
572	27.9	7.0	2.3	chr3	69143825	69144000	(129151559)	C	MER117	DNA/hAT-Charlie	(0)	197	13	2603550
16	9.1	5.4	2.6	chr3	73633065	73633101	(124662458)	+	(TTTGT)n	Simple_repeat	1	39	(0)	2611464
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
9592	20.0	2.9	0.4	chr3	86127828	86129618	(112165941)	+	ERVL-B4-int	LTR/ERVL	1768	3604	(2110)	2627875
16466	20.7	3.7	0.7	chr3	90046480	90048820	(108246739)	C	ERVL-B4-int	LTR/ERVL	(2405)	3309	902	2632701
25273	7.9	0.7	1.2	chr3	105602833	105604435	(92691124)	C	HERVL-int	LTR/ERVL	(2341)	3313	1725	2648460
31	0.0	0.0	0.0	chr3	107523219	107523247	(90772312)	+	(GCG)n	Simple_repeat	1	29	(0)	2651001
2675	31.2	4.5	6.1	chr3	119688771	119691141	(78604418)	+	PRIMAX-int	LTR/ERV1	1488	4630	(2983)	2668013
258	36.3	3.5	9.5	chr3	126703553	126703890	(71591669)	+	L2b	LINE/L2	3058	3374	(1)	2678968
327	27.8	4.0	0.0	chr3	133489278	133489374	(64806185)	C	Kanga1d	DNA/TcMar-Tc2	(508)	101	4	2689987
193	19.0	0.0	2.3	chr3	133489448	133489490	(64806069)	C	MIRb	SINE/MIR	(0)	268	227	2689993
1438	30.9	8.4	2.5	chr3	133489524	133490242	(64805317)	+	HERVL-int	LTR/ERVL	2298	3062	(2592)	2689994
462	32.9	1.2	1.8	chr3	136626735	136626901	(61668658)	C	MIRb	SINE/MIR	(58)	210	45	2694737
413	37.5	11.6	1.2	chr3	143345606	143345929	(54949630)	C	L2	LINE/L2	(2028)	1391	1030	2705550
28074	7.0	1.4	0.1	chr3	143921064	143924620	(54370939)	C	HERVL-int	LTR/ERVL	(0)	5654	2051	2706346
847	19.9	4.3	0.6	chr3	160412953	160413108	(37882451)	C	AluJb	SINE/Alu	(24)	288	127	2729746
833	17.5	0.0	0.0	chr3	160413150	160413275	(37882284)	C	FLAM_C	SINE/Alu	(9)	134	9	2729747
7446	13.0	0.6	0.1	chr3	166350210	166351299	(31944260)	C	HERVL-int	LTR/ERVL	(2744)	2910	1815	2737405
60	24.4	0.0	0.0	chr3	166466434	166466566	(31828993)	+	(TA)n	Simple_repeat	1	133	(0)	2737554
3958	22.0	1.8	0.4	chr3	166466567	166467337	(31828222)	+	ERVL-int	LTR/ERVL	2592	3373	(2384)	2737555
5234	7.5	0.0	0.0	chr3	166988413	166989068	(31306491)	C	HERVL-int	LTR/ERVL	(2897)	2757	2102	2738158
622	7.1	0.0	0.0	chr3	169642389	169642472	(28653087)	+	Alu	SINE/Alu	224	307	(4)	2741606
545	21.9	7.4	0.7	chr3	169669724	169669875	(28625684)	+	MER5A1	DNA/hAT-Charlie	4	166	(0)	2741642
190	36.8	5.0	5.8	chr3	169670203	169670323	(28625236)	+	L2c	LINE/L2	3241	3360	(27)	2741643
8540	14.2	3.9	0.2	chr3	171534654	171535963	(26759596)	C	ERVL-B4-int	LTR/ERVL	(2274)	3440	2081	2744715
612	30.1	11.2	2.6	chr3	177104746	177105055	(21190504)	+	Kanga11a	DNA/TcMar-Tc2	171	510	(460)	2752583
267	32.2	11.2	0.0	chr3	184574331	184574473	(13721086)	C	MIRb	SINE/MIR	(65)	203	43	2764934
2416	8.4	0.3	0.0	chr3	184660449	184660745	(13634814)	+	AluSp	SINE/Alu	1	298	(15)	2765079
185	23.5	8.1	8.1	chr3	184661356	184661388	(13634171)	+	L2b	LINE/L2	3040	3072	(303)	2765080
616	28.7	11.0	2.5	chr3	194561044	194561273	(3734286)	+	L1ME4a	LINE/L1	5876	6121	(3)	2781385
30	31.2	0.0	0.0	chr4	52964	53043	(190161512)	+	(GT)n	Simple_repeat	1	80	(0)	2788567
332	29.9	4.2	1.6	chr4	53793	53979	(190160576)	C	MER57E3	LTR/ERV1	(0)	487	296	2788568
30	8.2	0.0	0.0	chr4	1025267	1025305	(189189250)	+	(CA)n	Simple_repeat	1	39	(0)	2789791
308	35.1	9.7	0.6	chr4	1518354	1518522	(188696033)	+	L1MB8	LINE/L1	5811	5996	(188)	2790275
16671	8.4	1.8	1.7	chr4	2000001	2001620	(188212935)	+	L1PA8A	LINE/L1	2867	4492	(1654)	2790925
2103	14.2	0.0	1.6	chr4	2753158	2753473	(187461082)	+	AluJr	SINE/Alu	2	312	(0)	2792179
758	18.4	0.0	0.8	chr4	4682055	4682179	(185532376)	C	AluJo	SINE/Alu	(188)	124	1	2795231
335	28.8	1.2	0.0	chr4	4682250	4682329	(185532226)	+	MIRb	SINE/MIR	126	206	(62)	2795232
267	26.1	11.8	2.2	chr4	4682333	4682347	(185532208)	+	MIR3	SINE/MIR	23	38	(170)	2795233
2296	16.3	0.5	0.3	chr4	4682348	4682734	(185531821)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	1	2795234
2618	11.2	1.5	0.5	chr4	6422468	6422853	(183791702)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	2798349
386	33.1	8.2	7.5	chr4	6423114	6423191	(183791364)	C	L2a	LINE/L2	(1)	3425	3357	2798350
2346	10.6	0.6	0.6	chr4	6423192	6423503	(183791052)	C	AluSz	SINE/Alu	(0)	312	1	2798351
433	26.2	2.3	0.0	chr4	7750827	7750952	(182463603)	+	LTR33B	LTR/ERVL	371	499	(4)	2800631
2710	29.9	9.1	5.1	chr4	7750967	7751417	(182463138)	C	ERVL-E-int	LTR/ERVL	(2923)	2744	2275	2800632
2147	15.1	1.9	0.8	chr4	10024270	10024644	(180189911)	+	MLT1B	LTR/ERVL-MaLR	5	383	(7)	2804094
324	27.8	3.8	2.1	chr4	17614255	17614388	(172600167)	C	MIR3	SINE/MIR	(78)	152	20	2816582
464	34.1	7.5	0.6	chr4	19947181	19947354	(170267201)	+	L2b	LINE/L2	3189	3375	(0)	2820255
929	28.1	8.4	7.0	chr4	26103808	26104309	(164110246)	+	MLT1J	LTR/ERVL-MaLR	3	512	(0)	2830382
260	26.8	4.0	1.4	chr4	26727850	26727951	(163486604)	C	L2b	LINE/L2	(16)	3410	3303	2831511
2107	10.9	2.8	17.0	chr4	41294560	41294977	(148919578)	+	LTR18A	LTR/ERVL	1	357	(0)	2853803
35496	8.2	0.8	0.6	chr4	46485985	46490651	(143723904)	+	HERVL-int	LTR/ERVL	224	4902	(752)	2860902
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
1130	13.8	0.3	0.1	chr4	49514156	49515857	(140698698)	+	ACRO1	Satellite/acro	1	1705	(0)	2865184
237	30.2	12.8	0.0	chr4	53586323	53586438	(136628117)	C	UCON64	Unknown	(81)	570	438	2867909
329	29.5	3.7	2.3	chr4	53586823	53586954	(136627601)	C	MIRb	SINE/MIR	(0)	268	135	2867910
35992	12.5	2.2	1.7	chr4	63565048	63567823	(126646732)	+	HERVL-int	LTR/ERVL	1	2819	(2835)	2882146
196	20.4	1.8	5.3	chr4	63567824	63567880	(126646675)	C	L2c	LINE/L2	(36)	3351	3297	2882148
35992	12.5	2.2	1.7	chr4	63567881	63570510	(126644045)	+	HERVL-int	LTR/ERVL	2820	5492	(162)	2882146
37807	10.3	1.9	2.2	chr4	65811509	65813642	(124400913)	+	HERVL-int	LTR/ERVL	2268	4485	(1169)	2884856
1575	27.0	5.8	4.0	chr4	67609096	67609375	(122605180)	+	L1ME3B	LINE/L1	1384	1666	(5437)	2887214
1368	22.4	11.3	0.3	chr4	67609376	67609698	(122604857)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	3	2887216
33978	15.8	1.7	2.0	chr4	69528367	69532008	(120682547)	+	HERVL-int	LTR/ERVL	6	3669	(1985)	2889496
1524	26.6	8.4	1.4	chr4	76461515	76462067	(113752488)	C	ERVL-E-int	LTR/ERVL	(2950)	2717	2123	2899287
14000	12.9	0.2	0.9	chr4	77630872	77632868	(112581687)	C	HERVL18-int	LTR/ERVL	(0)	6047	4066	2900944
20582	12.1	1.1	1.3	chr4	80355624	80360211	(109854344)	C	L1PA13	LINE/L1	(821)	5945	1380	2904727
601	29.7	7.3	0.5	chr4	80360210	80360412	(109854143)	C	L1PA13	LINE/L1	(5531)	1254	1037	2904727
25740	21.9	3.2	2.0	chr4	80793684	80799041	(109415514)	C	ERVL-E-int	LTR/ERVL	(241)	5426	5	2905253
22776	16.9	2.9	2.1	chr4	95715889	95718012	(94496543)	C	ERVL-B4-int	LTR/ERVL	(2193)	3521	1410	2926756
14145	7.5	0.4	0.2	chr4	99192246	99194146	(91020409)	C	HERVL-int	LTR/ERVL	(1934)	3720	1817	2931366
1156	36.2	5.6	3.9	chr4	100338413	100339318	(89875237)	+	ERVL-E-int	LTR/ERVL	1471	2393	(3274)	2932919
310	31.3	1.1	5.1	chr4	100339329	100339505	(89875050)	+	ERVL-E-int	LTR/ERVL	2589	2758	(2909)	2932919
1535	35.4	6.4	1.3	chr4	100339530	100340350	(89874205)	+	ERVL-E-int	LTR/ERVL	2812	3676	(1991)	2932919
2180	11.2	1.0	0.3	chr4	105072332	105072613	(85141942)	C	AluSq2	SINE/Alu	(28)	285	2	2938983
561	24.2	0.0	0.8	chr4	105072690	105072814	(85141741)	+	MER96	DNA/hAT-Tip100	51	174	(1)	2938984
14	24.1	0.0	0.0	chr4	105474285	105474323	(84740232)	+	(CATT)n	Simple_repeat	1	39	(0)	2939523
416	12.5	0.0	0.0	chr4	110418654	110418717	(79795838)	+	Alu	SINE/Alu	1	64	(247)	2946579
11089	11.9	1.5	0.0	chr4	111583794	111585399	(78629156)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	2947990
1313	20.8	0.4	3.2	chr4	114980931	114981180	(75233375)	+	AluJo	SINE/Alu	1	243	(69)	2952696
61	3.2	0.0	0.0	chr4	114981206	114981269	(75233286)	+	(GAAG)n	Simple_repeat	1	64	(0)	2952697
242	36.3	4.0	2.0	chr4	114981337	114981485	(75233070)	C	MER5A	DNA/hAT-Charlie	(1)	188	37	2952698
26433	20.5	3.5	2.7	chr4	115893711	115898769	(74315786)	+	ERVL-B4-int	LTR/ERVL	477	5572	(142)	2953794
38922	11.2	1.7	1.4	chr4	126186701	126191188	(64023367)	C	HERVL-int	LTR/ERVL	(0)	5654	1125	2967533
317	32.8	2.4	2.4	chr4	130062367	130062575	(60151980)	+	PRIMA4-int	LTR/ERV1	2799	3007	(4606)	2972942
19	14.0	4.1	2.0	chr4	130062581	130062629	(60151926)	+	(ATTTATA)n	Simple_repeat	1	51	(0)	2972943
3046	34.8	4.8	4.7	chr4	130062633	130064883	(60149672)	+	PRIMA4-int	LTR/ERV1	3467	5704	(2566)	2972942
5857	6.8	3.5	0.4	chr4	132090409	132091164	(58123391)	C	LTR17	LTR/ERV1	(0)	780	1	2975474
19019	11.8	0.8	0.4	chr4	132091165	132093778	(58120777)	C	HERVL-int	LTR/ERVL	(3026)	2628	1	2975471
196	38.1	2.3	0.0	chr4	133101847	133101930	(57112625)	C	L2b	LINE/L2	(21)	3354	3269	2976600
1276	29.4	9.6	5.0	chr4	139096770	139097164	(51117391)	C	L1ME3Cz	LINE/L1	(2723)	3423	2971	2983909
815	17.8	8.8	1.3	chr4	139097167	139097323	(51117232)	C	AluJr	SINE/Alu	(8)	304	135	2983927
2151	10.7	0.0	0.4	chr4	139097367	139097646	(51116909)	+	AluSz	SINE/Alu	34	312	(0)	2983928
18511	13.8	2.5	2.9	chr4	146771252	146777064	(43437491)	C	L1PA15	LINE/L1	(1)	6784	975	2994771
324	4.9	0.0	0.0	chr4	146777203	146777243	(43437312)	C	MADE1	DNA/TcMar-Mariner	(39)	41	1	2994772
297	24.7	6.3	1.1	chr4	146777273	146777362	(43437193)	C	MIR1_Amn	SINE/MIR	(81)	149	55	2994773
684	35.4	9.1	2.3	chr4	146951921	146952319	(43262236)	+	ERVL-E-int	LTR/ERVL	2365	2793	(2874)	2994993
30371	7.2	1.6	0.0	chr4	149042372	149046249	(41168306)	+	HERVL-int	LTR/ERVL	1716	5654	(0)	2997928
10337	11.5	6.9	0.2	chr4	150026323	150027841	(40186714)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	2999166
17865	16.9	2.1	2.4	chr4	155741208	155744359	(34470196)	C	ERVL-B4-int	LTR/ERVL	(2572)	3142	1	3007862
25570	9.8	1.3	0.3	chr4	157404724	157408193	(32806362)	C	HERVL-int	LTR/ERVL	(0)	5654	2148	3010052
24468	7.4	2.4	1.5	chr4	162754368	162756987	(27457568)	+	HERVL-int	LTR/ERVL	2353	5025	(629)	3017136
25688	6.1	0.3	0.2	chr4	169318146	169323847	(20890708)	+	L1PA5	LINE/L1	449	6154	(0)	3026157
26822	6.7	0.4	1.1	chr4	169323856	169327208	(20887347)	+	HERVL-int	LTR/ERVL	2324	5654	(0)	3026156
24357	7.5	0.8	0.3	chr4	174979695	174982832	(15231723)	C	HERVL-int	LTR/ERVL	(0)	5654	2502	3033654
3765	9.4	0.0	0.0	chr4	174982833	174983331	(15231224)	C	MER9B	LTR/ERVK	(0)	499	1	3033656
5196	9.7	3.5	0.8	chr4	177407933	177408691	(12805864)	C	LTR17	LTR/ERV1	(0)	780	1	3036882
1811	14.6	7.5	1.3	chr4	177408692	177409049	(12805506)	+	MER39B	LTR/ERV1	33	415	(238)	3036881
1412	36.1	2.0	0.6	chr4	177762537	177763172	(12451383)	C	ERVL-B4-int	LTR/ERVL	(2234)	3480	2836	3037390
822	33.0	8.8	6.1	chr4	177763210	177763868	(12450687)	C	ERVL-B4-int	LTR/ERVL	(3087)	2670	2068	3037390
13	16.8	0.0	0.0	chr4	185907748	185907775	(4306780)	+	(CTCC)n	Simple_repeat	1	28	(0)	3048900
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
4747	18.1	7.3	9.6	chr4	190119764	190122447	(92108)	+	TAR1	Satellite/telo	1	2622	(566)	3054643
543	5.4	1.2	0.9	chr4	190122449	190123118	(91437)	+	(AGGGTT)n	Simple_repeat	1	678	(0)	3054644
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
3040	27.3	8.9	0.8	chr5	966075	966639	(180571620)	C	L1MC4a	LINE/L1	(7)	7875	7273	3055836
1490	31.1	3.2	2.4	chr5	1448685	1449244	(180089015)	+	ERVL-E-int	LTR/ERVL	2510	3075	(2592)	3056256
2057	33.9	2.5	4.4	chr5	6680307	6681281	(174856978)	+	ERVL-E-int	LTR/ERVL	1749	2704	(2963)	3062171
1483	20.0	6.4	5.0	chr5	6681291	6681674	(174856585)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3062172
21	16.7	2.1	0.0	chr5	10354121	10354167	(171184092)	+	G-rich	Low_complexity	1	48	(0)	3066756
2281	10.2	0.0	0.0	chr5	11578381	11578663	(169959596)	+	AluSg	SINE/Alu	1	283	(27)	3068487
39	0.0	0.0	0.0	chr5	11578670	11578705	(169959554)	+	(AATA)n	Simple_repeat	1	36	(0)	3068488
230	30.4	0.0	2.5	chr5	11578727	11578807	(169959452)	C	MIRc	SINE/MIR	(128)	140	62	3068489
1871	15.8	3.0	0.0	chr5	13758226	13758516	(167779743)	+	AluJb	SINE/Alu	5	304	(8)	3071255
221	27.9	2.3	7.5	chr5	13758517	13758609	(167779650)	+	MIRc	SINE/MIR	159	246	(22)	3071256
1471	19.9	9.8	2.5	chr5	15011146	15011334	(166526925)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	179	3073037
2177	13.8	0.0	0.3	chr5	15011335	15011638	(166526621)	C	AluSz	SINE/Alu	(9)	303	1	3073038
2442	6.0	0.0	2.3	chr5	24729068	24729367	(156808892)	+	AluY	SINE/Alu	1	293	(18)	3086443
2012	34.2	5.4	2.7	chr5	25015195	25016482	(156521777)	C	PRIMA4-int	LTR/ERV1	(3498)	4077	2754	3086826
41580	9.3	0.8	0.4	chr5	26399075	26404708	(155133551)	C	HERVL-int	LTR/ERVL	(0)	5654	1	3088525
2047	18.3	2.0	0.0	chr5	28852062	28852443	(152685816)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	3091667
307	32.1	6.4	0.6	chr5	31997178	31997340	(149540919)	+	L3	LINE/CR1	3586	3758	(341)	3095985
45208	6.4	1.7	0.3	chr5	32287596	32293169	(149245090)	+	HERVL-int	LTR/ERVL	1	5654	(0)	3096553
3482	23.9	11.9	1.1	chr5	35973329	35974909	(145563350)	+	ERVL-B4-int	LTR/ERVL	967	2724	(2990)	3102137
4163	19.4	1.3	0.4	chr5	35974911	35975666	(145562593)	+	ERVL-B4-int	LTR/ERVL	3841	4603	(1111)	3102137
45631	6.3	0.6	1.2	chr5	37266879	37269074	(144269185)	C	HERVL-int	LTR/ERVL	(1633)	4021	1829	3104123
33293	7.2	0.8	0.9	chr5	37795417	37798236	(143740023)	+	HERVL-int	LTR/ERVL	1386	4200	(1454)	3105045
44203	7.4	0.5	0.1	chr5	41659425	41665041	(139873218)	C	HERVL-int	LTR/ERVL	(0)	5654	20	3110684
466	32.3	9.7	1.3	chr5	60688357	60688582	(120849677)	+	MIRb	SINE/MIR	21	267	(1)	3131181
33795	6.8	0.5	0.3	chr5	61908556	61913030	(119625229)	C	HERVL-int	LTR/ERVL	(0)	5654	1171	3132956
1899	20.6	6.5	2.3	chr5	65846184	65846580	(115691679)	C	MLT2B1	LTR/ERVL	(105)	415	1	3138514
1411	18.0	5.0	5.3	chr5	65846581	65846920	(115691339)	C	L1MB3	LINE/L1	(565)	5618	5280	3138511
699	16.0	0.0	4.0	chr5	68044256	68044379	(113493880)	+	L1PA10	LINE/L1	6049	6167	(1)	3141624
2504	14.4	0.2	2.0	chr5	68044445	68044840	(113493419)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	2	3141625
1971	26.9	8.2	5.3	chr5	71677774	71678515	(109859744)	+	ERVL-E-int	LTR/ERVL	2202	2967	(2700)	3147897
1795	24.1	10.1	1.4	chr5	72516534	72517046	(109021213)	+	MLT1F1	LTR/ERVL-MaLR	7	569	(0)	3149093
16	12.1	5.6	0.0	chr5	81394162	81394197	(100144062)	+	(CCCGC)n	Simple_repeat	1	38	(0)	3163089
14	17.8	1.6	9.5	chr5	81394198	81394222	(100144037)	+	(GCCC)n	Simple_repeat	2	63	(0)	3163090
42310	8.2	0.8	1.5	chr5	85245147	85250836	(96287423)	C	HERVL-int	LTR/ERVL	(0)	5654	1	3168301
10660	23.9	2.6	2.4	chr5	85454810	85460436	(96077823)	C	L1PREC2	LINE/L1	(1970)	6171	561	3168540
29872	9.7	0.9	0.6	chr5	92060903	92064735	(89473524)	+	HERVL-int	LTR/ERVL	1798	5653	(1)	3177058
12299	22.6	3.9	3.6	chr5	102077205	102078766	(79459493)	+	L1PA15	LINE/L1	1	1599	(5186)	3189689
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
6221	7.8	1.7	2.3	chr5	106593381	106594992	(74943267)	+	L1PA10	LINE/L1	4548	6152	(16)	3195330
1341	18.4	10.3	0.0	chr5	106595018	106595261	(74942998)	+	AluJo	SINE/Alu	7	278	(34)	3195331
21	0.0	0.0	0.0	chr5	107672507	107672529	(73865730)	+	(T)n	Simple_repeat	1	23	(0)	3196633
3044	18.2	3.9	0.0	chr5	113322831	113323351	(68214908)	+	MLT1F	LTR/ERVL-MaLR	7	548	(0)	3204117
2094	12.5	1.0	1.3	chr5	116424468	116424778	(65113481)	+	AluSc8	SINE/Alu	1	310	(1)	3208123
344	31.4	7.3	3.2	chr5	116424886	116425108	(65113151)	+	L2b	LINE/L2	3160	3382	(5)	3208124
26971	8.8	2.4	0.4	chr5	122971455	122975074	(58563185)	C	HERVL-int	LTR/ERVL	(0)	5654	1959	3216760
39	2.7	0.0	0.0	chr5	124669649	124669686	(56868573)	+	(AC)n	Simple_repeat	1	38	(0)	3218945
9809	32.5	4.5	3.1	chr5	125792830	125797389	(55740870)	C	ERVL47-int	LTR/ERVL	(615)	4631	5	3220454
18233	13.7	2.5	2.4	chr5	126171640	126177995	(55360264)	+	L1PA8	LINE/L1	5	6354	(3)	3220856
42	21.1	1.0	1.0	chr5	127517502	127517601	(54020658)	+	G-rich	Low_complexity	1	101	(0)	3222955
43473	7.7	0.8	1.3	chr5	127674484	127680145	(53858114)	+	HERVL-int	LTR/ERVL	1	5635	(19)	3223158
1136	18.6	4.7	0.0	chr5	133774303	133774506	(47763753)	+	MER20	DNA/hAT-Charlie	2	215	(4)	3231376
1831	31.9	7.5	2.5	chr5	133774649	133775392	(47762867)	+	ERVL-E-int	LTR/ERVL	2509	3292	(2375)	3231377
9510	12.0	1.5	13.1	chr5	139549171	139550957	(41987302)	+	LTR12C	LTR/ERV1	3	1579	(0)	3241018
3428	11.0	1.2	1.4	chr5	149445195	149445708	(32092551)	C	LTR10D	LTR/ERV1	(0)	513	1	3257750
839	27.7	8.2	8.8	chr5	149445709	149446074	(32092185)	C	MLT1H	LTR/ERVL-MaLR	(85)	464	83	3257748
1189	25.9	11.2	1.4	chr5	149610837	149611329	(31926930)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	1	3258124
19	27.9	4.0	1.3	chr5	159209582	159209656	(22328603)	+	(GC)n	Simple_repeat	1	78	(0)	3275707
39725	7.6	1.4	1.1	chr5	160990660	160995498	(20542761)	+	HERVL-int	LTR/ERVL	1	4859	(795)	3279041
392	32.6	2.8	5.4	chr5	164448445	164448593	(17089666)	C	MIRc	SINE/MIR	(110)	158	14	3284006
386	29.6	0.6	15.0	chr5	164448649	164448855	(17089404)	+	MER45A	DNA/hAT-Tip100	1	177	(1)	3284007
2334	9.2	0.0	0.7	chr5	169021348	169021650	(12516609)	C	AluSx1	SINE/Alu	(11)	301	1	3291118
2027	12.8	0.7	0.0	chr5	172029501	172029782	(9508477)	+	AluSz6	SINE/Alu	29	312	(0)	3296523
1601	33.3	2.9	4.1	chr5	172029837	172030178	(9508081)	C	HERV16-int	LTR/ERVL	(2170)	2826	2483	3296524
1052	21.7	2.5	0.0	chr5	172030179	172030408	(9507851)	+	Tigger4a	DNA/TcMar-Tigger	1	236	(0)	3296525
1601	33.3	2.9	4.1	chr5	172030409	172030789	(9507470)	C	HERV16-int	LTR/ERVL	(2514)	2482	2112	3296524
1954	13.5	1.4	0.7	chr5	175905020	175905307	(5632952)	+	AluSz	SINE/Alu	2	291	(21)	3304378
3693	22.5	11.7	6.7	chr5	175905308	175906360	(5631899)	+	ERV3-16A3_I-int	LTR/ERVL	2349	3443	(1783)	3304375
12	23.5	3.3	4.8	chr5	176506989	176507048	(5031211)	+	A-rich	Low_complexity	1	62	(0)	3305421
16	16.3	0.0	2.8	chr5	176507053	176507088	(5031171)	+	(TAT)n	Simple_repeat	1	36	(0)	3305422
2546	31.1	5.1	4.0	chr5	177555408	177555930	(3982329)	+	ERVL-E-int	LTR/ERVL	2060	2602	(3065)	3307614
2157	10.6	0.7	1.0	chr5	177555931	177556233	(3982026)	C	AluSx	SINE/Alu	(10)	302	1	3307615
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
2606	1.0	0.0	1.0	chr5	179612239	179612542	(1925717)	+	AluYa5	SINE/Alu	1	301	(10)	3311197
2422	9.3	0.3	0.0	chr6	1551778	1552087	(169253892)	+	AluY	SINE/Alu	1	311	(0)	3316315
1685	28.2	8.0	2.8	chr6	1552088	1552585	(169253394)	+	ERVL-E-int	LTR/ERVL	2273	2860	(2854)	3316313
356	33.0	0.0	0.0	chr6	3239709	3239808	(167566171)	C	L2a	LINE/L2	(18)	3408	3309	3318623
1091	19.4	1.4	1.8	chr6	6707799	6708018	(164097961)	C	MER20	DNA/hAT-Charlie	(0)	219	1	3323790
366	24.4	3.2	0.0	chr6	6708163	6708252	(164097727)	C	MER89-int	LTR/ERV1	(4163)	2638	2546	3323791
2110	10.7	0.0	6.9	chr6	6708297	6708615	(164097364)	+	AluSx	SINE/Alu	1	297	(15)	3323792
32683	5.8	1.6	0.3	chr6	8403957	8407927	(162398052)	C	HERVL-int	LTR/ERVL	(0)	5654	1515	3326684
311	30.1	0.0	10.2	chr6	18901967	18902103	(151903876)	C	MIR	SINE/MIR	(24)	238	116	3343746
23969	6.0	0.4	0.5	chr6	27008402	27014570	(143791409)	+	L1PA6	LINE/L1	5	6154	(0)	3356152
8661	24.1	6.0	3.3	chr6	27206996	27208022	(143597957)	+	ERVL-E-int	LTR/ERVL	1465	2562	(3105)	3356472
1917	11.4	7.3	3.1	chr6	27208023	27208348	(143597631)	C	MER61A	LTR/ERV1	(0)	341	1	3356473
3992	20.3	2.9	4.7	chr6	27579534	27580357	(143225622)	+	LTR53-int	LTR/ERVL	858	1672	(1657)	3357153
2257	10.2	0.0	0.0	chr6	27580358	27580651	(143225328)	+	AluSq2	SINE/Alu	1	294	(19)	3357154
1947	13.0	7.8	2.8	chr6	36448527	36448704	(134357275)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	216	3372541
5983	6.5	0.0	14.1	chr6	36448705	36449666	(134356313)	C	LTR12	LTR/ERV1	(0)	826	1	3372542
210	32.8	1.5	0.0	chr6	38915690	38915753	(131890226)	+	L2c	LINE/L2	2818	2882	(537)	3377201
24243	10.3	2.1	1.0	chr6	47178328	47181671	(123624308)	C	HERVL-int	LTR/ERVL	(2272)	3382	1	3391358
8639	5.9	1.0	1.8	chr6	49439021	49440123	(121365856)	C	HERVL-int	LTR/ERVL	(2076)	3578	2485	3394374
26005	8.1	1.1	0.5	chr6	55624104	55627500	(115178479)	+	HERVL-int	LTR/ERVL	2239	5654	(0)	3403152
33856	16.4	1.4	0.9	chr6	68134510	68140135	(102665844)	C	HERVL-int	LTR/ERVL	(0)	5654	1	3416334
1777	20.0	6.5	4.5	chr6	71090396	71090888	(99715091)	C	MLT1D	LTR/ERVL-MaLR	(1)	504	1	3420113
31787	8.1	1.1	1.0	chr6	72190494	72192767	(98613212)	C	HERVL-int	LTR/ERVL	(1942)	3712	1453	3421553
2125	9.6	9.4	4.4	chr6	78858334	78858747	(91947232)	+	LTR14B	LTR/ERVK	1	608	(0)	3430479
900	10.5	6.5	4.0	chr6	78858750	78858787	(91947192)	C	AluSx	SINE/Alu	(159)	153	121	3430476
8797	1.0	0.0	0.0	chr6	78858788	78859755	(91946224)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3430480
2094	14.9	0.0	0.3	chr6	82062457	82062758	(88743221)	+	AluSz	SINE/Alu	1	301	(11)	3434585
41434	7.2	1.6	0.3	chr6	83010975	83016556	(87789423)	C	HERVL-int	LTR/ERVL	(0)	5654	1	3435931
6556	15.8	0.9	0.1	chr6	84106577	84107664	(86698315)	C	ERVL-int	LTR/ERVL	(2042)	3715	2619	3437439
1613	14.7	1.1	0.0	chr6	84107659	84107924	(86698055)	C	ERVL-int	LTR/ERVL	(3050)	2707	2439	3437439
1220	17.1	0.9	0.9	chr6	87946499	87946717	(82859262)	C	MER20	DNA/hAT-Charlie	(0)	219	1	3442485
750	27.9	7.7	2.5	chr6	89119550	89119832	(81686147)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	169	3444214
699	14.9	6.6	0.0	chr6	89119820	89119933	(81686046)	C	FLAM_C	SINE/Alu	(10)	133	12	3444215
1888	20.2	8.3	3.9	chr6	89435972	89436486	(81369493)	C	MER119	DNA/hAT-Charlie	(0)	583	44	3444767
929	17.6	2.0	0.0	chr6	89436516	89436734	(81369245)	+	L1MB3	LINE/L1	5843	6016	(167)	3444768
1935	28.1	7.8	4.4	chr6	89882232	89882812	(80923167)	C	ERVL-E-int	LTR/ERVL	(2544)	3123	2512	3445577
25	21.4	1.6	1.6	chr6	89882922	89882982	(80922997)	+	(AT)n	Simple_repeat	1	62	(0)	3445579
20245	15.3	4.4	1.4	chr6	96701643	96705067	(74100912)	+	ERVL-B4-int	LTR/ERVL	1	3530	(2184)	3454017
270	25.4	7.8	0.0	chr6	99905438	99905508	(70900471)	C	Charlie9	DNA/hAT-Charlie	(2679)	78	2	3458317
29796	7.6	1.3	0.1	chr6	104079673	104083498	(66722481)	+	HERVL-int	LTR/ERVL	1	3870	(1784)	3463535
194	32.7	9.8	0.0	chr6	104852082	104852182	(65953797)	C	MIR3	SINE/MIR	(10)	198	87	3464523
35	0.0	0.0	0.0	chr6	104852200	104852229	(65953750)	+	(TG)n	Simple_repeat	1	30	(0)	3464524
268	27.2	11.5	1.1	chr6	113486425	113486517	(57319462)	+	MIRb	SINE/MIR	3	106	(162)	3478554
20317	16.1	2.5	3.2	chr6	115466274	115469372	(55336607)	C	L1MA1	LINE/L1	(4385)	3180	13	3481332
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
30848	15.8	3.3	4.1	chr6	125268464	125272207	(45533772)	+	HERVL18-int	LTR/ERVL	443	4229	(1818)	3494096
1730	30.9	6.2	2.9	chr6	131116526	131116730	(39689249)	+	L1MEd	LINE/L1	316	520	(6566)	3501858
834	15.4	9.3	0.0	chr6	131116731	131116905	(39689074)	+	MER53	DNA/hAT	1	193	(0)	3501859
1730	30.9	6.2	2.9	chr6	131116906	131117449	(39688530)	+	L1MEd	LINE/L1	521	1086	(6000)	3501858
4216	4.9	1.2	0.0	chr6	133558414	133558920	(37247059)	C	MER9a2	LTR/ERVK	(0)	513	1	3505384
29689	7.2	0.8	0.3	chr6	133558921	133561510	(37244469)	C	HERVL-int	LTR/ERVL	(3040)	2614	2	3505383
16	17.7	0.0	0.0	chr6	134464478	134464509	(36341470)	+	(AGAATA)n	Simple_repeat	1	32	(0)	3506966
13	8.7	4.0	0.0	chr6	134464672	134464696	(36341283)	+	(ATTTT)n	Simple_repeat	1	26	(0)	3506967
337	17.8	2.7	0.0	chr6	134464697	134464769	(36341210)	C	Alu	SINE/Alu	(3)	298	224	3506968
42034	7.7	1.8	1.6	chr6	140692782	140696014	(30109965)	C	HERVL-int	LTR/ERVL	(0)	3279	1	3516363
1919	23.6	9.7	1.2	chr6	142192833	142193639	(28612340)	C	L1MC4	LINE/L1	(131)	7911	6974	3518175
3606	12.4	4.4	0.3	chr6	142193649	142194212	(28611767)	+	ERVL-B4-int	LTR/ERVL	2436	3023	(2691)	3518177
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
34384	7.1	1.0	1.7	chr6	143869286	143872553	(26933426)	C	HERVL-int	LTR/ERVL	(964)	4690	1464	3520537
2261	16.1	4.8	4.8	chr6	145662448	145662924	(25143055)	C	MER31A	LTR/ERV1	(8)	477	1	3523046
1968	3.6	0.0	0.0	chr6	145663248	145663496	(25142483)	+	L1PA2	LINE/L1	126	374	(5781)	3523047
20	3.4	3.3	0.0	chr6	148985385	148985414	(21820565)	+	(CAA)n	Simple_repeat	1	31	(0)	3527752
226	20.0	0.0	0.0	chr6	148985569	148985613	(21820366)	C	L2-3_Crp	LINE/L2	(1299)	797	753	3527753
1724	25.1	8.2	0.0	chr6	148985852	148986265	(21819714)	C	LTR16B2	LTR/ERVL	(11)	451	1	3527754
1995	18.4	3.2	2.8	chr6	149462521	149463067	(21342912)	+	MLT2A2	LTR/ERVL	1	553	(1)	3528479
217	32.7	6.6	4.9	chr6	149463264	149463427	(21342552)	C	L2a	LINE/L2	(461)	2958	2792	3528477
2063	8.9	0.0	0.0	chr6	149463429	149463699	(21342280)	+	AluSg	SINE/Alu	1	271	(39)	3528480
14785	19.6	6.2	4.9	chr6	150328479	150331953	(20474026)	C	ERVL-B4-int	LTR/ERVL	(0)	5714	2195	3530043
19284	7.9	1.2	1.4	chr6	159659554	159660451	(11145528)	+	L1PBa1	LINE/L1	4657	5541	(1321)	3544396
6625	3.2	0.2	0.9	chr6	159660452	159661247	(11144732)	+	SVA_D	Retroposon/SVA	596	1386	(0)	3544399
4230	16.7	4.1	2.7	chr6	160732359	160733195	(10072784)	C	MER21C	LTR/ERVL	(2)	936	1	3545724
185	11.8	2.9	2.9	chr6	160733196	160733230	(10072749)	C	OldhAT1	DNA/hAT-Ac	(1313)	1535	1501	3545725
189	35.9	1.3	0.0	chr6	161270156	161270233	(9535746)	+	L2c	LINE/L2	3309	3387	(0)	3546428
2192	10.7	0.0	4.2	chr6	161270487	161270795	(9535184)	+	AluSx	SINE/Alu	1	296	(16)	3546429
1470	21.5	4.6	8.2	chr6	161807444	161807920	(8998059)	C	MLT1C	LTR/ERVL-MaLR	(5)	462	4	3547249
1619	31.9	6.2	1.2	chr6	162120486	162121654	(8684325)	+	ERVL-E-int	LTR/ERVL	1887	3194	(2460)	3547701
15194	12.4	3.9	1.1	chr6	167351639	167352743	(3453236)	+	Tigger1	DNA/TcMar-Tigger	1	1172	(1246)	3554314
1612	17.9	5.9	0.8	chr6	168401354	168401724	(2404255)	C	ERVL-B4-int	LTR/ERVL	(2)	5712	5322	3555449
709	13.7	1.6	0.0	chr6	168401691	168401814	(2404165)	+	Ricksha_c	DNA/MULE-MuDR	255	380	(1668)	3555450
22	15.9	2.4	0.0	chr6	168401821	168401862	(2404117)	+	(CA)n	Simple_repeat	1	43	(0)	3555451
562	20.9	0.0	0.0	chr6	168401863	168401977	(2404002)	C	ERVL-B4-int	LTR/ERVL	(316)	5398	5284	3555449
13228	24.0	7.8	8.5	chr6	168401987	168404256	(2401723)	C	ERVL-B4-int	LTR/ERVL	(395)	5319	3077	3555449
388	35.6	4.6	3.7	chr6	168614431	168615747	(2190232)	+	TAR1	Satellite/telo	1	1328	(552)	3555632
20094	10.6	0.8	1.6	chr6	169099146	169101954	(1704025)	+	HERVL-int	LTR/ERVL	1	2787	(2867)	3556133
1774	7.1	0.0	0.0	chr6	169101951	169102174	(1703805)	+	HERVL-int	LTR/ERVL	3828	4051	(1603)	3556133
199	30.3	3.8	0.0	chr6	169418065	169418140	(1387839)	+	L2c	LINE/L2	3347	3425	(1)	3556429
273	26.4	10.7	1.6	chr6	169418209	169418335	(1387644)	+	L2a	LINE/L2	3286	3425	(1)	3556430
332	28.3	12.2	3.2	chr6	170450086	170450271	(355708)	+	MIRb	SINE/MIR	44	248	(20)	3557442
272	29.4	13.7	3.7	chr7	340050	340349	(159005624)	C	LTR16E1	LTR/ERVL	(2)	536	202	3558221
1238	26.2	5.1	5.4	chr7	440526	440916	(158905057)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3558346
1093	12.9	0.0	1.8	chr7	1175665	1175827	(158170146)	C	AluJo	SINE/Alu	(152)	160	1	3559430
553	35.4	8.2	2.4	chr7	1175828	1176361	(158169612)	C	ERV3-16A3_I-int	LTR/ERVL	(2364)	2632	2061	3559429
24	8.4	0.0	0.0	chr7	2527316	2527353	(156818620)	+	(GTGCGT)n	Simple_repeat	1	38	(0)	3561579
432	27.3	16.4	6.0	chr7	7566192	7566577	(151779396)	+	L2b	LINE/L2	2940	3373	(2)	3571258
1560	32.7	5.0	0.3	chr7	11243769	11244336	(148101637)	+	ERVL-E-int	LTR/ERVL	2134	2729	(2938)	3575977
16	0.0	0.0	0.0	chr7	11244498	11244514	(148101459)	+	(T)n	Simple_repeat	1	17	(0)	3575978
458	32.2	4.8	1.2	chr7	11244604	11244896	(148101077)	+	ERVL-E-int	LTR/ERVL	3039	3419	(2235)	3575977
18523	17.1	2.5	0.5	chr7	12145322	12148494	(147197479)	C	ERVL-B4-int	LTR/ERVL	(2476)	3238	1	3577046
21201	6.3	3.0	2.1	chr7	26998385	27000000	(132345973)	+	HERVL-int	LTR/ERVL	1295	2955	(2699)	3597852
526	28.0	13.0	2.7	chr7	28809655	28809874	(130536099)	+	MIRb	SINE/MIR	17	262	(6)	3600605
413	34.5	5.6	3.5	chr7	38757348	38757608	(120588365)	C	Tigger16b	DNA/TcMar-Tigger	(0)	336	70	3615606
225	26.8	13.4	0.0	chr7	38757769	38757865	(120588108)	+	L2c	LINE/L2	3259	3370	(17)	3615607
3473	21.8	0.3	0.0	chr7	39758585	39759204	(119586769)	+	HERVIP10B3-int	LTR/ERV1	2384	3005	(4598)	3617092
761	32.1	3.6	1.9	chr7	51798331	51798708	(107547265)	+	ERVL-E-int	LTR/ERVL	2172	2556	(3111)	3634124
1776	25.9	7.5	3.5	chr7	51798895	51799186	(107546787)	C	L1ME1	LINE/L1	(29)	6150	5846	3634125
5428	20.2	0.8	1.4	chr7	52143786	52144812	(107201161)	+	ERVL-int	LTR/ERVL	1989	3009	(2748)	3634519
26052	10.6	1.0	0.3	chr7	53905106	53908707	(105437266)	+	HERVL-int	LTR/ERVL	2029	5654	(0)	3636791
1137	17.1	2.9	0.5	chr7	55285181	55285380	(104060593)	C	MER57-int	LTR/ERV1	(7332)	205	1	3638403
3127	9.8	1.2	0.2	chr7	55285381	55285808	(104060165)	C	MER57A1	LTR/ERV1	(0)	432	1	3638403
231	26.7	7.9	9.0	chr7	55285810	55286064	(104059909)	+	L1ME4a	LINE/L1	5796	6047	(77)	3638401
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
1837	32.1	2.1	2.4	chr7	67840051	67840692	(91505281)	+	ERVL-E-int	LTR/ERVL	1900	2642	(3025)	3653129
1928	14.7	0.3	0.3	chr7	67840693	67841010	(91504963)	C	AluSx	SINE/Alu	(0)	312	1	3653130
1672	17.9	2.9	0.0	chr7	69110306	69110573	(90235400)	+	AluJr	SINE/Alu	1	276	(36)	3655936
1663	10.4	9.6	2.5	chr7	75624926	75625204	(83720769)	C	AluSx1	SINE/Alu	(1)	311	11	3670088
407	10.9	0.0	0.0	chr7	75625215	75625269	(83720704)	C	AluJo	SINE/Alu	(188)	124	70	3670089
1911	23.7	13.8	4.3	chr7	79581936	79582787	(79763186)	C	Zaphod	DNA/hAT-Tip100	(3060)	971	27	3676991
2955	19.2	4.8	0.0	chr7	79582941	79583646	(79762327)	C	L1MB2	LINE/L1	(27)	6642	5861	3676992
10955	7.0	3.0	4.5	chr7	83673136	83674738	(75671235)	+	LTR12C	LTR/ERV1	2	1579	(0)	3682572
13	20.9	3.8	3.6	chr7	88220048	88220100	(71125873)	+	(GCCCT)n	Simple_repeat	1	55	(0)	3688231
2549	7.4	0.7	0.0	chr7	98593988	98594297	(60751676)	+	AluSx	SINE/Alu	1	312	(0)	3702952
833	26.4	5.0	2.0	chr7	98594411	98594661	(60751312)	C	HERV16-int	LTR/ERVL	(3837)	1159	901	3702953
1079	22.9	4.5	6.8	chr7	100517240	100517442	(58828531)	C	AluJr	SINE/Alu	(118)	194	1	3706778
293	33.3	4.1	4.6	chr7	100517503	100517528	(58828445)	+	ERVL-E-int	LTR/ERVL	2605	2630	(3037)	3706780
442	25.9	5.3	0.0	chr7	100517529	100517636	(58828337)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	3706781
293	33.3	4.1	4.6	chr7	100517637	100517804	(58828169)	+	ERVL-E-int	LTR/ERVL	2631	2798	(2869)	3706780
725	7.1	4.0	1.0	chr7	101138804	101138901	(58207072)	+	AluJo	SINE/Alu	24	124	(188)	3708076
1641	15.7	6.7	0.8	chr7	101667691	101667958	(57678015)	+	AluJr	SINE/Alu	1	285	(27)	3709363
1024	25.1	3.3	4.2	chr7	101667959	101667974	(57677999)	C	L2a	LINE/L2	(316)	3110	3097	3709362
1095	15.7	0.6	0.0	chr7	101679506	101679677	(57666296)	C	AluJo	SINE/Alu	(3)	309	137	3709396
234	35.5	4.6	3.6	chr7	103104159	103104436	(56241537)	C	L2-1_AMi	LINE/L2	(691)	544	264	3712221
1507	27.7	8.6	1.3	chr7	106100590	106101264	(53244709)	+	L2a	LINE/L2	2601	3350	(76)	3717098
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
25629	16.0	2.6	1.1	chr7	106819835	106822678	(52523295)	+	ERVL-B4-int	LTR/ERVL	1414	4304	(1410)	3718128
17	19.7	2.1	2.0	chr7	114086036	114086083	(45259890)	+	(CAACAA)n	Simple_repeat	1	49	(0)	3727930
46	4.3	0.0	0.0	chr7	114086235	114086282	(45259691)	+	(CA)n	Simple_repeat	1	48	(0)	3727931
12	10.2	2.7	7.9	chr7	114086390	114086426	(45259547)	+	(CCCG)n	Simple_repeat	1	38	(0)	3727932
14	15.4	2.6	2.6	chr7	117779305	117779342	(41566631)	+	(ATTTTCT)n	Simple_repeat	1	39	(0)	3733009
197	29.0	2.8	8.0	chr7	121394081	121394155	(37951818)	+	L2c	LINE/L2	3291	3361	(26)	3737600
6210	17.3	3.0	0.9	chr7	122290095	122291314	(37054659)	C	L1M3f	LINE/L1	(4672)	1577	4	3738912
925	27.5	2.1	1.4	chr7	122291349	122291632	(37054341)	C	ERVL-E-int	LTR/ERVL	(3084)	2583	2298	3738907
6493	16.5	2.2	1.2	chr7	124019633	124020800	(35325173)	+	ERVL-B4-int	LTR/ERVL	2003	3182	(2575)	3741303
36	2.7	0.0	0.0	chr7	124032403	124032440	(35313533)	+	(GCT)n	Simple_repeat	1	38	(0)	3741320
2024	16.8	2.6	3.3	chr7	124356434	124356822	(34989151)	+	MLT1B	LTR/ERVL-MaLR	1	386	(4)	3741739
780	25.1	14.6	3.6	chr7	124356871	124357312	(34988661)	C	L1MEg	LINE/L1	(4094)	2148	1650	3741738
30513	11.1	1.6	1.3	chr7	124615083	124620015	(34725958)	+	HERVL-int	LTR/ERVL	1	4965	(702)	3742080
45728	6.1	1.4	0.3	chr7	129444646	129450234	(29895739)	C	HERVL-int	LTR/ERVL	(0)	5654	1	3749160
271	20.4	0.0	0.0	chr7	130698804	130698852	(28647121)	+	ERVL-B4-int	LTR/ERVL	2572	2620	(3034)	3751503
269	27.3	17.6	4.3	chr7	130698892	130699052	(28646921)	+	LTR50	LTR/ERVL	45	231	(564)	3751504
3308	11.6	3.4	2.6	chr7	135181467	135181997	(24163976)	+	HERV1_LTRd	LTR/ERV1	1	535	(0)	3758543
234	34.9	3.5	2.2	chr7	137862889	137863111	(21482862)	C	L1MEj	LINE/L1	(1418)	742	517	3762501
1412	17.4	0.4	1.7	chr7	138780696	138780936	(20565037)	+	AluJb	SINE/Alu	75	312	(0)	3764304
2357	12.6	0.3	0.0	chr7	138780937	138781269	(20564704)	C	ERVL-B4-int	LTR/ERVL	(2854)	2860	2527	3764302
860	17.4	5.3	6.7	chr7	138781279	138781317	(20564656)	C	L1MC	LINE/L1	(1873)	4273	4248	3764305
2347	9.3	0.3	1.3	chr7	138781318	138781629	(20564344)	C	AluSg7	SINE/Alu	(0)	309	1	3764306
617	26.6	2.8	2.3	chr7	147833720	147833896	(11512077)	C	LTR33B	LTR/ERVL	(324)	179	2	3777815
618	31.1	4.4	2.4	chr7	151995057	151995096	(7350877)	+	L2a	LINE/L2	3212	3252	(174)	3784387
51	38.1	0.0	0.0	chr7	155534282	155534464	(3811509)	+	(CA)n	Simple_repeat	1	183	(0)	3789753
14160	14.8	2.5	0.6	chr7	156819636	156821920	(2524053)	+	ERVL-B4-int	LTR/ERVL	1894	4224	(1490)	3791384
181	34.8	11.4	1.7	chr7	157205131	157205311	(2140662)	+	MIRc	SINE/MIR	2	202	(66)	3792054
993	19.3	3.2	13.1	chr7	157525139	157525524	(1820449)	+	L1MA5	LINE/L1	5198	5547	(765)	3792565
2081	23.2	2.4	0.0	chr7	157525839	157526567	(1819406)	+	L1MA5	LINE/L1	5513	6295	(5)	3792565
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
831	34.3	3.5	1.4	chr8	1960519	1960885	(143177751)	+	ERVL-B4-int	LTR/ERVL	2121	2495	(3219)	3796266
324	34.9	5.8	4.1	chr8	6943881	6944098	(138194538)	C	LTR53-int	LTR/ERVL	(1692)	1637	1416	3802820
465	27.4	8.4	7.1	chr8	6944248	6944542	(138194094)	C	L2a	LINE/L2	(112)	3314	3016	3802821
1793	18.9	0.7	0.3	chr8	23034449	23034745	(122103891)	+	AluJo	SINE/Alu	5	302	(10)	3827246
19819	16.1	2.5	3.5	chr8	23034746	23035143	(122103493)	+	ERVL-B4-int	LTR/ERVL	2273	2672	(3042)	3827245
2130	14.4	0.0	0.0	chr8	23035144	23035441	(122103195)	C	AluSz6	SINE/Alu	(14)	298	1	3827247
229	29.7	9.4	6.8	chr8	23041820	23042025	(122096611)	+	L2	LINE/L2	2161	2372	(1047)	3827257
4431	17.4	6.8	2.0	chr8	30057374	30058176	(115080460)	C	ERVL-B4-int	LTR/ERVL	(2601)	3113	2270	3838963
1318	21.6	8.2	2.3	chr8	30058177	30058466	(115080170)	C	MLT1C	LTR/ERVL-MaLR	(62)	405	93	3838964
213	26.6	0.0	1.5	chr8	38717320	38717384	(106421252)	C	MamTip2	DNA/hAT-Tip100	(99)	206	143	3852816
298	35.8	6.4	3.5	chr8	38717567	38717763	(106420873)	C	MIR3	SINE/MIR	(5)	203	1	3852817
10683	15.8	7.0	1.3	chr8	39057921	39061531	(106077105)	C	ERVL-B4-int	LTR/ERVL	(0)	5714	1897	3853446
1392	10.1	2.0	1.5	chr8	52568177	52568377	(92570259)	C	MLT2A1	LTR/ERVL	(44)	400	199	3868327
346	2.4	0.0	0.0	chr8	52568377	52568417	(92570219)	C	MLT2A1	LTR/ERVL	(412)	41	1	3868327
20923	6.9	1.1	2.1	chr8	52568419	52571121	(92567515)	C	HERVL-int	LTR/ERVL	(2981)	2673	1	3868328
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
1485	28.3	1.5	2.6	chr8	57214477	57215085	(87923551)	C	MER50	LTR/ERV1	(123)	611	10	3874995
522	24.8	16.9	0.9	chr8	57898669	57898896	(87239740)	C	ORSL	DNA/hAT-Tip100	(3)	272	1	3875890
2062	16.6	4.1	1.8	chr8	61094522	61094902	(84043734)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	3880172
319	23.8	3.7	7.1	chr8	61094903	61094922	(84043714)	C	MIRb	SINE/MIR	(158)	110	90	3880171
264	27.8	7.6	0.0	chr8	63229650	63229746	(81908890)	+	HERVL40-int	LTR/ERVL	1332	1436	(3587)	3882934
1849	20.7	13.1	7.3	chr8	63229816	63230337	(81908299)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	4	3882935
498	30.4	5.2	4.4	chr8	63367224	63367350	(81771286)	+	MIR	SINE/MIR	11	146	(116)	3883162
4655	5.8	0.5	0.5	chr8	63367351	63367941	(81770695)	C	LTR10C	LTR/ERV1	(0)	591	1	3883163
4891	25.1	6.8	4.2	chr8	64811247	64813165	(80325471)	C	ERVL-E-int	LTR/ERVL	(1696)	3971	2063	3884964
16	28.9	1.3	3.9	chr8	65838029	65838105	(79300531)	+	A-rich	Low_complexity	1	78	(0)	3886493
257	33.7	1.1	2.2	chr8	65838190	65838280	(79300356)	C	L2c	LINE/L2	(0)	3387	3298	3886494
324	26.8	10.6	3.8	chr8	66415644	66415775	(78722861)	C	MIRb	SINE/MIR	(0)	268	127	3887332
1009	17.9	1.3	11.8	chr8	66415792	66415858	(78722778)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	323	3887333
2188	11.5	0.3	0.0	chr8	66415859	66416144	(78722492)	+	AluSz	SINE/Alu	1	287	(25)	3887334
322	34.9	5.6	5.2	chr8	75026981	75027210	(70111426)	+	L2c	LINE/L2	3107	3337	(50)	3900441
2211	13.9	0.0	0.0	chr8	87298474	87298783	(57839853)	C	AluSx3	SINE/Alu	(1)	310	1	3917228
29492	5.9	0.4	2.4	chr8	100206048	100207667	(44930969)	+	HERVL-int	LTR/ERVL	2324	3892	(1762)	3936369
1881	8.3	0.7	17.4	chr8	100454194	100454556	(44684080)	+	AluSz	SINE/Alu	1	302	(10)	3936822
14030	20.1	5.7	4.8	chr8	106401353	106402808	(38735828)	C	ERVL-B4-int	LTR/ERVL	(2368)	3346	1769	3946476
16	18.4	0.0	2.5	chr8	113377014	113377058	(31761578)	+	G-rich	Low_complexity	1	43	(0)	3956055
1982	15.6	7.1	0.6	chr8	122567498	122567851	(22570785)	C	THE1D	LTR/ERVL-MaLR	(2)	379	1	3970102
335	28.3	6.1	0.9	chr8	122567988	122568135	(22570501)	C	MIRb	SINE/MIR	(32)	236	71	3970103
2003	11.3	4.4	0.3	chr8	123591309	123591591	(21547045)	C	AluSz	SINE/Alu	(17)	295	1	3972197
2459	8.3	0.0	0.0	chr8	132133352	132133653	(13004983)	C	AluSc5	SINE/Alu	(7)	302	1	3987971
236	16.4	12.7	0.0	chr8	132133688	132133742	(13004894)	+	Charlie8	DNA/hAT-Charlie	2353	2415	(13)	3987972
295	22.9	6.2	7.1	chr8	132133993	132134105	(13004531)	+	MamRep1527	LTR	747	858	(111)	3987973
24	34.6	2.5	1.6	chr8	132174652	132174769	(12963867)	+	(TG)n	Simple_repeat	1	121	(0)	3988047
657	29.6	7.4	0.4	chr8	132174835	132175061	(12963575)	+	MIR	SINE/MIR	7	250	(12)	3988048
189	31.1	4.7	3.9	chr8	132246676	132246802	(12891834)	+	L2b	LINE/L2	3024	3151	(224)	3988205
215	31.2	7.0	0.0	chr8	132246878	132246957	(12891679)	+	MIRc	SINE/MIR	115	200	(68)	3988206
617	32.8	2.5	4.2	chr8	133551782	133552020	(11586616)	C	MIR	SINE/MIR	(1)	267	33	3990694
237	26.9	10.3	7.1	chr8	133552046	133552157	(11586479)	C	L2b	LINE/L2	(16)	3359	3244	3990695
2374	10.1	0.0	0.0	chr8	133562210	133562507	(11576129)	C	AluSc	SINE/Alu	(11)	298	1	3990720
212	23.5	0.0	17.1	chr8	133562508	133562540	(11576096)	+	MIR3	SINE/MIR	123	149	(59)	3990719
24	5.1	4.8	0.0	chr8	133562778	133562794	(11575842)	+	(TTTC)n	Simple_repeat	1	17	(0)	3990721
56	0.0	0.0	0.0	chr8	133562795	133562844	(11575792)	+	(TTCC)n	Simple_repeat	1	50	(0)	3990722
2235	12.4	0.0	0.3	chr8	133611578	133611891	(11526745)	+	AluSq2	SINE/Alu	1	313	(0)	3990837
234	23.8	2.4	2.4	chr8	133612135	133612216	(11526420)	+	MamRep564	Unknown	172	253	(104)	3990838
11042	20.8	2.2	2.0	chr8	142899680	142900399	(2238237)	+	ERVL-B4-int	LTR/ERVL	2086	2799	(2915)	4005428
1352	5.6	0.6	0.0	chr8	142900400	142900579	(2238057)	+	L1PA5	LINE/L1	5974	6154	(0)	4005429
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
41354	6.5	0.8	0.2	chr9	6099363	6104432	(132290285)	+	HERVL-int	LTR/ERVL	34	5132	(522)	4017530
27	20.8	1.8	0.0	chr9	14322297	14322353	(124072364)	+	(GT)n	Simple_repeat	1	58	(0)	4028795
12	24.1	0.0	0.0	chr9	14322573	14322606	(124072111)	+	(CGCCC)n	Simple_repeat	1	34	(0)	4028796
795	10.4	0.0	0.0	chr9	14850429	14850534	(123544183)	+	U6	snRNA	1	106	(1)	4029539
1418	7.0	1.1	0.0	chr9	14850536	14850721	(123543996)	+	L1PA10	LINE/L1	5964	6151	(17)	4029540
571	30.1	4.2	4.0	chr9	14850823	14851151	(123543566)	+	MER102b	DNA/hAT-Charlie	4	333	(8)	4029541
461	28.7	0.9	0.0	chr9	18393385	18393492	(120001225)	+	MER81	DNA/hAT-Blackjack	6	114	(0)	4034606
25853	7.5	0.4	1.7	chr9	21847327	21850874	(116543843)	+	HERVL-int	LTR/ERVL	1	3502	(2152)	4039782
17001	8.6	0.9	0.9	chr9	22833024	22834616	(115560101)	+	HERVL-int	LTR/ERVL	1725	3329	(2325)	4041011
453	33.0	12.5	2.5	chr9	38290169	38290729	(100103988)	+	L2c	LINE/L2	2500	3148	(239)	4064319
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
2707	27.2	7.3	5.5	chr9	61855698	61856977	(76537740)	+	SST1	Satellite/centr	263	1561	(2)	4072475
15	5.6	0.0	0.0	chr9	61856982	61857000	(76537717)	+	(TG)n	Simple_repeat	1	19	(0)	4072477
23	25.6	1.7	0.0	chr9	61857000	61857059	(76537658)	+	(TC)n	Simple_repeat	1	61	(0)	4072478
1951	29.4	5.2	6.5	chr9	61857061	61858378	(76536339)	+	SST1	Satellite/centr	262	1562	(1)	4072479
3051	15.5	2.6	0.5	chr9	62838347	62838981	(75555736)	+	TAR1	Satellite/telo	1420	2068	(43)	4073704
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
1161	32.9	4.9	0.0	chr9	73727930	73728333	(64666384)	C	LTR33B	LTR/ERVL	(3)	500	76	4088444
368	29.3	10.7	1.5	chr9	73813779	73813913	(64580804)	C	ERVL-int	LTR/ERVL	(1272)	4485	4337	4088556
1324	28.6	1.4	0.3	chr9	73813927	73814270	(64580447)	+	ERVL-E-int	LTR/ERVL	2474	2821	(2846)	4088555
1503	22.3	2.8	3.7	chr9	75952443	75952903	(62441814)	C	L1ME1	LINE/L1	(0)	6179	5723	4091730
7712	7.0	3.2	0.3	chr9	79733830	79734970	(58659747)	+	L1P3	LINE/L1	2572	3746	(2400)	4097667
257	25.3	1.1	9.0	chr9	84521273	84521372	(53873345)	+	MIRb	SINE/MIR	18	109	(159)	4104863
1810	11.2	0.5	0.0	chr9	87334865	87335087	(51059630)	+	AluSz	SINE/Alu	1	224	(88)	4109315
1468	16.1	9.6	0.5	chr9	89220802	89221094	(49173623)	+	MLT1B	LTR/ERVL-MaLR	52	374	(0)	4112251
908	25.0	0.5	2.2	chr9	89679224	89679448	(48715269)	+	L1MC4	LINE/L1	7680	7900	(142)	4112804
17	0.0	4.8	0.0	chr9	89679455	89679475	(48715242)	+	(CT)n	Simple_repeat	1	22	(0)	4112805
597	18.7	1.7	1.1	chr9	89679498	89679634	(48715083)	+	L1MC4	LINE/L1	7925	8042	(0)	4112806
392	24.3	11.9	5.1	chr9	90909502	90909696	(47485021)	C	MIRc	SINE/MIR	(15)	253	44	4114440
347	32.0	2.3	5.2	chr9	90909707	90909841	(47484876)	C	MER5B	DNA/hAT-Charlie	(3)	175	45	4114441
400	9.8	0.0	0.0	chr9	90909851	90909901	(47484816)	+	AluYk11	SINE/Alu	1	51	(260)	4114442
765	17.6	11.5	4.1	chr9	90910071	90910365	(47484352)	C	MLT1B	LTR/ERVL-MaLR	(1)	389	1	4114443
15057	15.3	3.2	3.0	chr9	91547146	91549691	(46845026)	C	ERVL-B4-int	LTR/ERVL	(738)	4976	2423	4115359
4863	19.2	5.2	1.2	chr9	91549689	91551285	(46843432)	C	ERVL-B4-int	LTR/ERVL	(3986)	1728	1	4115359
17466	16.2	4.4	0.5	chr9	91985419	91988334	(46406383)	+	ERVL-B4-int	LTR/ERVL	2075	5107	(607)	4116034
866	19.1	3.8	2.2	chr9	95695107	95695289	(42699428)	C	AluJr	SINE/Alu	(4)	308	123	4121594
2640	9.6	1.3	0.8	chr9	95695599	95695977	(42698740)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4121595
482	29.6	11.1	2.7	chr9	99068784	99069005	(39325712)	+	MIRb	SINE/MIR	1	243	(25)	4127786
443	34.2	6.0	4.8	chr9	99069143	99069554	(39325163)	C	L2c	LINE/L2	(41)	3346	2930	4127787
30348	6.4	1.6	1.0	chr9	100074354	100078175	(38316542)	+	HERVL-int	LTR/ERVL	1562	5420	(234)	4129513
15909	9.0	1.0	1.4	chr9	100636585	100638426	(37756291)	C	L1P2	LINE/L1	(4338)	1846	5	4130509
15	26.3	5.4	1.3	chr9	107283703	107283776	(31110941)	+	G-rich	Low_complexity	1	78	(0)	4140362
6574	9.5	1.6	0.5	chr9	107352269	107353976	(31040741)	C	L1PREC2	LINE/L1	(1)	6159	4439	4140487
1104	26.1	5.4	7.4	chr9	110545720	110546096	(27848621)	+	MLT1H	LTR/ERVL-MaLR	181	549	(0)	4146444
267	38.5	6.4	4.1	chr9	110546485	110546728	(27847989)	+	AmnSINE1	SINE/5S-Deu-L2	6	255	(320)	4146445
2658	28.9	8.2	5.4	chr9	126261833	126262758	(12131959)	C	L1ME3Cz	LINE/L1	(2139)	4007	3046	4176135
484	30.7	7.3	10.9	chr9	132211586	132211913	(6182804)	+	L2b	LINE/L2	3048	3363	(12)	4188446
30	9.2	0.0	0.0	chr9	132211914	132211959	(6182758)	+	(ATTC)n	Simple_repeat	1	46	(0)	4188447
484	30.7	7.3	10.9	chr9	132211960	132211970	(6182747)	+	L2b	LINE/L2	3364	3374	(1)	4188446
180	25.0	5.1	1.8	chr9	136513116	136513172	(1881545)	C	OldhAT1	DNA/hAT-Ac	(899)	1949	1891	4194452
899	36.2	6.7	4.2	chr9	136590693	136591804	(1802913)	+	ERVL-E-int	LTR/ERVL	1684	2824	(2843)	4194526
2170	12.2	0.0	1.9	chr9	136706648	136706958	(1687759)	+	AluSx1	SINE/Alu	1	305	(7)	4194698
3741	32.8	3.9	3.7	chr9	136706959	136707635	(1687082)	+	HERVL40-int	LTR/ERVL	1766	2440	(3090)	4194690
12	28.7	0.0	0.0	chr9	137233515	137233556	(1161161)	+	G-rich	Low_complexity	1	42	(0)	4195370
3912	18.6	4.8	3.9	chr9	137731600	137732763	(661954)	C	LTR2752	LTR/ERV1	(0)	1263	15	4196090
8328	16.6	5.6	4.8	chr9	137944040	137945826	(448891)	C	HERV4_I-int	LTR/ERV1	(2416)	2599	522	4196362
1676	17.4	1.0	3.4	chrX	2819138	2819435	(153221460)	+	AluJo	SINE/Alu	1	291	(21)	4363630
316	33.8	6.0	0.0	chrX	2819545	2819701	(153221194)	C	Charlie17	DNA/hAT-Charlie	(2708)	208	42	4363625
259	27.3	0.0	1.5	chrX	3678842	3678908	(152361987)	+	MLT1J	LTR/ERVL-MaLR	116	181	(331)	4365334
1507	19.7	1.8	2.5	chrX	3817038	3817321	(152223574)	C	AluJr	SINE/Alu	(24)	288	7	4365658
236	33.0	6.4	0.0	chrX	8888870	8888972	(147151923)	+	MIRb	SINE/MIR	39	148	(120)	4373877
1443	32.1	8.5	2.9	chrX	16434714	16435411	(139605484)	+	ERVL-E-int	LTR/ERVL	1713	2453	(3214)	4385999
479	23.8	6.2	0.0	chrX	16435414	16435518	(139605377)	C	L2a	LINE/L2	(0)	3426	3315	4386000
383	29.7	8.0	0.0	chrX	16435541	16435678	(139605217)	+	ERVL-E-int	LTR/ERVL	2495	2644	(3023)	4385999
724	22.4	12.7	0.0	chrX	16435711	16435889	(139605006)	+	MIR	SINE/MIR	20	224	(38)	4386001
258	30.3	9.8	8.8	chrX	16436470	16436730	(139604165)	+	MLT1N2	LTR/ERVL-MaLR	33	296	(266)	4386002
240	35.0	0.8	0.0	chrX	16436846	16436968	(139603927)	+	MLT1N2	LTR/ERVL-MaLR	432	555	(7)	4386002
910	27.1	8.5	4.3	chrX	20368592	20368777	(135672118)	C	MLT1L	LTR/ERVL-MaLR	(25)	585	392	4393029
1986	18.1	0.3	6.5	chrX	20368778	20369073	(135671822)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	117	4393030
2332	9.0	0.0	0.0	chrX	22362560	22362849	(133678046)	C	AluSc	SINE/Alu	(19)	290	1	4395907
186	27.7	2.1	0.0	chrX	22363011	22363057	(133677838)	C	MIRc	SINE/MIR	(195)	73	26	4395908
1263	32.6	7.0	10.4	chrX	22363084	22364223	(133676672)	C	L2c	LINE/L2	(277)	3149	2060	4395909
19060	14.1	4.6	1.4	chrX	37461988	37465035	(118575860)	C	ERVL-B4-int	LTR/ERVL	(0)	5714	2564	4417434
753	13.9	0.8	0.8	chrX	37465054	37465176	(118575719)	+	LTR56	LTR/ERV1	9	131	(314)	4417435
3214	14.8	0.8	1.0	chrX	37465177	37465680	(118575215)	+	PrimLTR79	LTR/ERV1	1	503	(0)	4417436
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
723	31.8	4.5	4.2	chrX	50861794	50862102	(105178793)	C	LTR33A	LTR/ERVL	(15)	505	196	4439966
284	28.4	0.0	2.1	chrX	50862112	50862208	(105178687)	+	MLT1K	LTR/ERVL-MaLR	6	100	(495)	4439967
27673	16.2	5.6	4.6	chrX	55744405	55747805	(100293090)	C	ERVL-B4-int	LTR/ERVL	(2159)	3555	35	4447456
27643	7.2	1.0	0.5	chrX	63310273	63313527	(92727368)	C	HERVL-int	LTR/ERVL	(0)	5654	2382	4450038
24084	7.5	0.3	0.3	chrX	63627467	63630720	(92410175)	C	HERVL-int	LTR/ERVL	(0)	5654	2401	4450328
702	8.2	0.0	0.0	chrX	63630736	63630833	(92410062)	C	MLT2A1	LTR/ERVL	(346)	98	1	4450329
35681	9.2	1.5	0.9	chrX	64626630	64631703	(91409192)	+	HERVL-int	LTR/ERVL	1	5104	(550)	4451564
700	24.5	4.2	3.3	chrX	69186598	69186812	(86854083)	C	L2a	LINE/L2	(111)	3315	3099	4457720
974	26.2	0.0	5.1	chrX	69187040	69187292	(86853603)	C	MIR	SINE/MIR	(0)	262	23	4457721
8998	19.2	4.3	0.3	chrX	71892125	71893788	(84147107)	C	ERVL-B4-int	LTR/ERVL	(1362)	4352	2620	4462332
986	22.1	2.5	0.0	chrX	71893788	71893982	(84146913)	+	ERVL-B4-int	LTR/ERVL	3071	3270	(2444)	4462333
4073	17.7	1.9	1.5	chrX	71893981	71894699	(84146196)	C	ERVL-B4-int	LTR/ERVL	(3099)	2615	1894	4462332
25437	9.2	0.2	0.3	chrX	73166118	73169645	(82871250)	C	HERVL-int	LTR/ERVL	(47)	5607	2083	4464283
3139	31.7	5.7	4.1	chrX	73708058	73710152	(82330743)	C	ERV24B_Prim-int	LTR/ERV1	(3151)	4462	2332	4464672
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
4676	14.6	1.5	0.0	chrX	79296883	79297664	(76743231)	+	L1PA13	LINE/L1	2054	2847	(3938)	4470711
1747	16.2	3.4	2.8	chrX	79297666	79297989	(76742906)	C	THE1D	LTR/ERVL-MaLR	(0)	381	56	4470712
1191	23.4	5.1	1.6	chrX	79297992	79298426	(76742469)	+	L1MB4	LINE/L1	2711	3161	(2979)	4470713
3151	14.1	9.1	1.6	chrX	82666315	82667052	(73373843)	C	MER4-int	LTR/ERV1	(3063)	3535	2737	4474091
41134	7.8	0.9	0.4	chrX	86306833	86312455	(69728440)	+	HERVL-int	LTR/ERVL	1	5654	(0)	4477950
7743	18.4	3.2	0.5	chrX	94445386	94446786	(61594109)	+	ERVL-B4-int	LTR/ERVL	2084	3523	(2191)	4486954
910	16.1	1.8	0.0	chrX	109171963	109172123	(46868772)	C	MER52A	LTR/ERV1	(0)	1755	1592	4506556
260	25.7	2.2	5.9	chrX	109172219	109172404	(46868491)	C	MER52D	LTR/ERV1	(1593)	530	352	4506557
2767	23.4	9.2	9.2	chrX	109172469	109173499	(46867396)	C	MER31-int	LTR/ERV1	(807)	4064	3045	4506555
23629	14.8	3.8	0.5	chrX	111983208	111987204	(44053691)	C	ERVL-B4-int	LTR/ERVL	(1475)	4239	105	4510722
4479	24.4	7.7	3.5	chrX	124112754	124114888	(31926007)	C	L1M1	LINE/L1	(4390)	3175	460	4528089
26307	9.2	2.0	2.7	chrX	125727957	125730360	(30310535)	C	HERVL-int	LTR/ERVL	(1064)	3292	876	4530416
622	21.4	9.6	0.6	chrX	127935719	127935967	(28104928)	C	MLT2B3	LTR/ERVL	(66)	488	215	4532815
20385	9.7	0.9	1.9	chrX	127935968	127938359	(28102536)	C	HERVL-int	LTR/ERVL	(2773)	2881	518	4532816
1243	3.6	0.0	0.0	chrX	131828334	131828472	(24212423)	+	L1PA3	LINE/L1	6014	6152	(3)	4538543
13247	12.6	1.9	0.9	chrX	132445802	132452124	(23588771)	C	L1PA8	LINE/L1	(6)	6481	9	4539363
35343	13.5	3.3	3.1	chrX	134093895	134097892	(21943003)	+	ERVL-int	LTR/ERVL	931	4971	(786)	4542075
19547	8.9	0.7	0.4	chrX	146312957	146315662	(9725233)	C	HERVL-int	LTR/ERVL	(893)	4761	2050	4560335
22895	7.5	0.7	0.9	chrX	149751043	149753893	(6287002)	C	HERVL-int	LTR/ERVL	(2788)	2866	3	4564999
588	11.2	0.0	0.0	chrX	153583179	153583258	(2457637)	+	AluJo	SINE/Alu	6	85	(227)	4570428
2853	17.9	8.3	0.0	chrX	153583286	153583895	(2457000)	C	L1MB3	LINE/L1	(1)	6182	5518	4570429
333	21.9	3.0	0.0	chrY	10663511	10663574	(46563841)	C	AluYj4	SINE/Alu	(22)	289	224	4587921
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057