15	17.4	12.3	0.0	chr1	829414	829478	(248126944)	+	(GTGCT)n	Simple_repeat	1	73	(0)	1068
258	27.6	3.8	3.8	chr1	829596	829727	(248126695)	C	HAL1	LINE/L1	(655)	1852	1721	1069
2376	8.5	0.0	0.0	chr1	1177316	1177609	(247778813)	C	AluYj4	SINE/Alu	(16)	295	2	1437
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
2071	10.3	0.0	2.7	chr1	1466266	1466557	(247489865)	+	AluYh3a3	SINE/Alu	1	284	(8)	1789
3500	18.2	5.3	5.6	chr1	1466558	1466991	(247489431)	C	L1M3	LINE/L1	(2210)	3930	3506	1784
315	29.2	6.7	4.2	chr1	1538816	1538997	(247417425)	+	MIRb	SINE/MIR	15	202	(60)	1912
325	36.8	13.7	0.7	chr1	3380580	3380877	(245575545)	+	L3	LINE/CR1	3624	3966	(133)	3956
264	16.3	3.3	0.9	chr1	3409647	3410190	(245546232)	+	(TG)n	Simple_repeat	1	562	(0)	3973
335	24.5	0.1	0.4	chr1	4647039	4647789	(244308633)	+	(TGG)n	Simple_repeat	1	752	(0)	5634
180	37.1	4.9	3.3	chr1	5980925	5981105	(242975317)	+	L2b	LINE/L2	3148	3331	(44)	7516
485	20.5	2.1	0.8	chr1	6149586	6150660	(242805762)	+	(GATG)n	Simple_repeat	1	1098	(0)	7739
737	17.5	4.8	0.3	chr1	6174363	6175681	(242780741)	+	(GATG)n	Simple_repeat	1	1382	(0)	7776
2480	2.1	0.0	0.3	chr1	6404426	6404707	(242551715)	+	AluY	SINE/Alu	1	281	(30)	8159
57	0.0	0.0	0.0	chr1	6404708	6404758	(242551664)	+	(AAAT)n	Simple_repeat	1	51	(0)	8160
454	31.6	2.9	0.0	chr1	7442774	7442906	(241513516)	C	L2b	LINE/L2	(1)	3374	3238	9851
365	34.5	5.2	7.5	chr1	7443041	7443372	(241513050)	+	L2b	LINE/L2	3052	3375	(0)	9852
779	21.6	1.6	1.0	chr1	7568066	7569832	(241386590)	+	(TCA)n	Simple_repeat	1	1795	(0)	10010
266	24.7	1.6	0.6	chr1	7607056	7607726	(241348696)	+	(GGAT)n	Simple_repeat	1	682	(0)	10058
435	29.5	0.4	1.4	chr1	7654470	7655796	(241300626)	+	(AC)n	Simple_repeat	1	1332	(0)	10122
224	18.8	2.3	0.8	chr1	7884690	7885164	(241071258)	+	(CATC)n	Simple_repeat	1	486	(0)	10475
2300	9.9	0.3	0.0	chr1	8822285	8822578	(240133844)	+	AluSq2	SINE/Alu	1	295	(18)	12317
131	4.2	2.7	5.3	chr1	9059986	9060207	(239896215)	+	(AC)n	Simple_repeat	1	228	(0)	12853
192	20.8	3.8	2.0	chr1	9060220	9060743	(239895679)	+	(AC)n	Simple_repeat	1	544	(0)	12853
181	31.3	0.0	0.0	chr1	9293836	9294382	(239662040)	+	(GT)n	Simple_repeat	1	547	(0)	13325
1679	8.3	1.3	0.4	chr1	9659102	9659330	(239297092)	+	L1PA10	LINE/L1	5932	6162	(6)	14094
1612	18.5	7.7	0.8	chr1	9659377	9659752	(239296670)	C	L1MB3	LINE/L1	(3)	6180	5777	14095
2413	17.3	4.4	4.2	chr1	9798201	9798726	(239157696)	+	L1MB5	LINE/L1	5607	6133	(41)	14400
371	28.6	21.1	4.2	chr1	11944245	11944290	(237012132)	+	MIR	SINE/MIR	220	262	(0)	18803
37	0.0	0.0	0.0	chr1	11944423	11944454	(237011968)	+	(AC)n	Simple_repeat	1	32	(0)	18805
27435	6.2	1.1	0.7	chr1	12392564	12395953	(236560469)	C	HERVL-int	LTR/ERVL	(2250)	3404	1	19726
206	20.0	1.8	2.6	chr1	12644779	12645370	(236311052)	+	(CTTC)n	Simple_repeat	1	587	(0)	20163
3603	30.8	3.8	1.6	chr1	12669213	12670382	(236286040)	+	ERVL-E-int	LTR/ERVL	1873	3068	(2599)	20212
226	18.9	0.0	0.0	chr1	12674318	12674354	(236282068)	+	LTR41	LTR/ERVL	585	621	(147)	20218
3616	29.4	4.3	2.6	chr1	12674390	12675590	(236280832)	C	ERVL-E-int	LTR/ERVL	(2951)	2716	1495	20219
620	24.8	10.3	4.0	chr1	15527392	15527622	(233428800)	C	MIRb	SINE/MIR	(0)	268	4	25474
15	0.0	0.0	0.0	chr1	15603047	15603063	(233353359)	+	(AC)n	Simple_repeat	1	17	(0)	25652
16	4.5	0.0	0.0	chr1	16111682	16111704	(232844718)	+	(CTGT)n	Simple_repeat	1	23	(0)	26713
44	32.8	0.0	0.0	chr1	16111915	16112057	(232844365)	+	(CA)n	Simple_repeat	1	143	(0)	26714
566	27.4	5.6	0.5	chr1	16141273	16141474	(232814948)	C	Charlie16a	DNA/hAT-Charlie	(63)	279	67	26771
998	16.2	3.4	0.6	chr1	16179952	16180125	(232776297)	+	L1MB3	LINE/L1	6002	6180	(3)	26868
2257	10.2	0.7	1.3	chr1	16180148	16180451	(232775971)	+	AluSz	SINE/Alu	1	302	(10)	26869
400	30.3	1.0	0.0	chr1	16180452	16180550	(232775872)	C	L2a	LINE/L2	(20)	3406	3307	26870
31	0.0	3.0	0.0	chr1	16221577	16221609	(232734813)	+	(GGAT)n	Simple_repeat	1	34	(0)	26957
60	30.3	3.5	1.7	chr1	16221635	16221658	(232734764)	+	(TGGA)n	Simple_repeat	1	24	(0)	26958
35	9.1	1.7	0.0	chr1	16221659	16221717	(232734705)	+	(GGAT)n	Simple_repeat	1	60	(0)	26959
60	30.3	3.5	1.7	chr1	16221718	16221976	(232734446)	+	(TGGA)n	Simple_repeat	1	264	(0)	26960
3020	20.9	7.6	8.9	chr1	17217494	17218401	(231738021)	+	MER63C	DNA/hAT-Blackjack	36	930	(0)	28938
1886	10.2	6.7	0.8	chr1	17227266	17227530	(231728892)	+	AluJb	SINE/Alu	1	282	(30)	28952
58	0.0	0.0	0.0	chr1	17227531	17227582	(231728840)	+	(AAAT)n	Simple_repeat	1	52	(0)	28953
20	24.4	0.0	4.4	chr1	19210179	19210246	(229746176)	+	(CCG)n	Simple_repeat	1	68	(0)	33227
701	23.6	0.0	0.0	chr1	20095046	20095168	(228861254)	+	AluJo	SINE/Alu	1	123	(189)	35067
4626	23.2	8.4	3.7	chr1	20095194	20096476	(228859946)	+	ERVL-E-int	LTR/ERVL	2303	3652	(2015)	35066
35	6.7	2.1	0.0	chr1	20291166	20291212	(228665210)	+	(GT)n	Simple_repeat	1	48	(0)	35455
81	21.9	3.1	2.2	chr1	20291329	20291551	(228664871)	+	(CT)n	Simple_repeat	1	230	(0)	35456
42	0.0	0.0	0.0	chr1	21345885	21345920	(227610502)	+	(TG)n	Simple_repeat	1	36	(0)	37718
20	0.0	0.0	0.0	chr1	21345921	21345942	(227610480)	+	(CG)n	Simple_repeat	1	22	(0)	37719
28	21.0	4.2	4.0	chr1	21346056	21346150	(227610272)	+	(TG)n	Simple_repeat	1	99	(0)	37720
17	21.8	0.0	0.0	chr1	21651413	21651446	(227304976)	+	(CA)n	Simple_repeat	1	34	(0)	38383
18	12.4	13.1	3.2	chr1	21651542	21651569	(227304853)	+	(CACACAG)n	Simple_repeat	1	54	(41)	38384
22	15.1	0.0	0.0	chr1	21651570	21651606	(227304816)	+	(AC)n	Simple_repeat	1	37	(0)	38385
18	12.4	13.1	3.2	chr1	21651607	21651625	(227304797)	+	(CACACAG)n	Simple_repeat	55	95	(0)	38384
18	30.3	5.2	0.0	chr1	21651692	21651768	(227304654)	+	(CG)n	Simple_repeat	1	81	(0)	38386
870	32.9	13.2	4.0	chr1	21879170	21879655	(227076767)	C	L3	LINE/CR1	(18)	4081	3530	38872
57	0.0	0.0	0.0	chr1	22254161	22254209	(226702213)	+	(GT)n	Simple_repeat	1	49	(0)	39745
44	9.1	2.8	1.4	chr1	22254210	22254281	(226702141)	+	(AG)n	Simple_repeat	1	74	(0)	39746
244	32.4	6.9	1.8	chr1	22254311	22254420	(226702002)	C	MIR3	SINE/MIR	(50)	158	43	39747
202	34.7	1.3	0.0	chr1	22311920	22311994	(226644428)	+	MIR	SINE/MIR	187	262	(0)	39869
259	26.3	9.2	2.9	chr1	22312126	22312227	(226644195)	+	L2c	LINE/L2	3279	3387	(0)	39870
376	28.6	7.5	4.5	chr1	23470060	23470213	(225486209)	+	MIR3	SINE/MIR	23	181	(27)	42497
1171	17.1	1.0	4.3	chr1	23699410	23699620	(225256802)	C	AluJb	SINE/Alu	(21)	291	88	43128
8443	9.4	3.0	3.2	chr1	24891494	24892825	(224063597)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	252	45953
475	11.1	0.0	0.0	chr1	24892818	24892889	(224063533)	+	THE1B	LTR/ERVL-MaLR	224	295	(69)	45954
632	30.2	5.6	0.4	chr1	24892897	24893132	(224063290)	C	ERVL-B4-int	LTR/ERVL	(3070)	2597	2349	45946
722	32.7	8.2	0.0	chr1	24893134	24893402	(224063020)	+	L2a	LINE/L2	3133	3425	(1)	45955
272	12.5	7.3	2.1	chr1	27086488	27087076	(221869346)	+	(CA)n	Simple_repeat	2	622	(0)	50896
59	0.0	0.0	0.0	chr1	28885033	28885082	(220071340)	+	(AC)n	Simple_repeat	1	50	(0)	55402
14	19.3	6.4	0.0	chr1	29237124	29237170	(219719252)	+	(GTGTTGT)n	Simple_repeat	1	50	(0)	56234
37	2.9	0.0	0.0	chr1	29280650	29280685	(219675737)	+	(TG)n	Simple_repeat	1	36	(0)	56317
21	29.9	2.5	1.2	chr1	29280727	29280805	(219675617)	+	(TG)n	Simple_repeat	1	81	(0)	56317
864	24.4	3.6	4.0	chr1	29280812	29281059	(219675363)	C	MIRb	SINE/MIR	(21)	247	1	56318
10273	28.9	4.8	2.4	chr1	29335059	29337837	(219618585)	+	ERVL-E-int	LTR/ERVL	1805	4773	(881)	56409
16725	17.9	2.5	1.9	chr1	29377930	29380337	(219576085)	C	L1MA4	LINE/L1	(3898)	3667	1239	56484
32601	7.1	1.7	1.7	chr1	29796326	29799198	(219157224)	+	HERVL-int	LTR/ERVL	1541	4474	(1180)	57305
262	15.8	0.4	0.2	chr1	30699739	30700194	(218256228)	+	(CATC)n	Simple_repeat	1	458	(0)	58872
60	1.8	0.0	0.0	chr1	30801414	30801469	(218154953)	+	(AC)n	Simple_repeat	1	56	(0)	59103
247	19.8	1.0	0.4	chr1	30839828	30840325	(218116097)	+	(TGGA)n	Simple_repeat	1	503	(0)	59195
1187	15.0	0.0	0.0	chr1	31899635	31899801	(217056621)	C	AluJb	SINE/Alu	(87)	225	59	61587
445	26.6	6.7	1.4	chr1	31899802	31899942	(217056480)	+	L2a	LINE/L2	3245	3393	(33)	61588
337	27.2	15.4	7.3	chr1	31900010	31900321	(217056101)	C	MLT1O	LTR/ERVL-MaLR	(5)	537	184	61589
225	28.2	1.0	1.0	chr1	32272759	32273434	(216682988)	+	(TG)n	Simple_repeat	1	683	(0)	62488
15	11.7	0.0	0.0	chr1	32292241	32292268	(216664154)	+	(GGGCC)n	Simple_repeat	1	28	(0)	62539
2550	7.4	0.0	0.0	chr1	32722752	32723061	(216233361)	+	AluY	SINE/Alu	1	310	(1)	63581
1631	18.8	0.6	8.8	chr1	32723062	32723256	(216233166)	+	AluJb	SINE/Alu	146	312	(0)	63580
1215	11.5	0.0	0.0	chr1	32723322	32723478	(216232944)	+	AluSx	SINE/Alu	156	312	(0)	63582
404	28.8	4.8	2.0	chr1	32928071	32928272	(216028150)	C	ERVL-E-int	LTR/ERVL	(328)	5339	5132	64048
258	33.3	3.6	0.0	chr1	32928271	32928378	(216028044)	C	ERVL-E-int	LTR/ERVL	(2861)	2853	2742	64049
1027	28.2	13.9	0.5	chr1	32928667	32928989	(216027433)	C	ERVL-E-int	LTR/ERVL	(3344)	2323	1964	64049
2689	4.2	0.0	0.7	chr1	32963434	32963743	(215992679)	+	AluSx1	SINE/Alu	1	308	(4)	64112
1340	33.1	7.2	4.7	chr1	33581791	33582780	(215373642)	+	ERV3-16A3_I-int	LTR/ERVL	994	2012	(3655)	65343
2671	26.6	3.3	3.5	chr1	33582777	33583607	(215372815)	+	ERV3-16A3_I-int	LTR/ERVL	2270	3098	(2128)	65343
529	24.3	7.8	4.3	chr1	34325493	34325677	(214630745)	+	MIRc	SINE/MIR	7	198	(70)	66614
270	27.2	0.4	0.6	chr1	36126466	36127190	(212829232)	+	(GT)n	Simple_repeat	1	728	(0)	70184
46122	6.7	0.4	0.6	chr1	37365528	37371193	(211585229)	+	HERVL-int	LTR/ERVL	1	5654	(0)	72590
292	23.4	0.9	0.1	chr1	37442350	37443025	(211513397)	+	(CTCT)n	Simple_repeat	1	682	(0)	72740
2170	9.4	2.0	0.0	chr1	37554443	37554739	(211401683)	+	AluSz6	SINE/Alu	1	303	(9)	72993
261	26.4	3.3	0.0	chr1	37554743	37554843	(211401579)	+	L1MC5	LINE/L1	7047	7119	(2185)	72994
758	13.7	0.8	1.6	chr1	37995613	37995738	(210960684)	+	L1PA8A	LINE/L1	6007	6131	(0)	73884
19	8.1	0.0	0.0	chr1	38328660	38328701	(210627721)	+	(CA)n	Simple_repeat	1	42	(0)	74501
321	31.2	9.3	5.3	chr1	38786524	38786750	(210169672)	+	L2c	LINE/L2	3022	3258	(129)	75331
2518	23.9	1.2	2.4	chr1	38787040	38787614	(210168808)	C	MER74B	LTR/ERVL	(0)	622	55	75334
2281	9.7	0.0	0.0	chr1	38787635	38787923	(210168499)	+	AluSz6	SINE/Alu	2	290	(22)	75335
13	32.7	0.0	0.0	chr1	40161427	40161479	(208794943)	+	G-rich	Low_complexity	1	53	(0)	78243
1928	13.7	0.3	1.7	chr1	40720587	40720878	(208235544)	+	AluJo	SINE/Alu	3	290	(22)	79391
253	27.9	6.0	0.0	chr1	40720908	40720986	(208235436)	C	L2a	LINE/L2	(1)	3425	3342	79392
425	33.0	1.8	1.7	chr1	40789198	40789373	(208167049)	C	MIR3	SINE/MIR	(27)	181	7	79505
208	18.2	7.7	0.8	chr1	41888688	41889275	(207067147)	+	(AC)n	Simple_repeat	1	633	(0)	81624
78	31.5	3.8	2.2	chr1	42849881	42850279	(206106143)	+	(GT)n	Simple_repeat	1	414	(0)	83275
28564	6.7	1.0	0.5	chr1	42866266	42869799	(206086623)	+	HERVL-int	LTR/ERVL	2104	5654	(0)	83301
1308	24.2	7.8	3.5	chr1	43042224	43042286	(205914136)	+	ERV3-16A3_LTR	LTR/ERVL	1	63	(359)	83652
2270	16.5	6.4	2.5	chr1	43042287	43042734	(205913688)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	83653
1813	25.4	4.2	5.6	chr1	43074451	43074951	(205881471)	C	ERVL-E-int	LTR/ERVL	(2676)	2991	2498	83731
1314	30.8	7.3	7.4	chr1	43074960	43075283	(205881139)	C	ERVL-E-int	LTR/ERVL	(4484)	1183	857	83731
493	26.9	14.6	12.8	chr1	43121209	43121734	(205834688)	C	L1MB3	LINE/L1	(5972)	635	96	83798
2313	12.2	0.0	0.3	chr1	43121735	43122028	(205834394)	C	AluSz6	SINE/Alu	(19)	293	1	83801
1885	31.1	3.5	1.5	chr1	43469533	43469790	(205486632)	C	ERVL-E-int	LTR/ERVL	(1165)	4502	4242	84353
3011	32.0	8.2	3.4	chr1	43469877	43471318	(205485104)	C	ERVL-B4-int	LTR/ERVL	(2835)	2879	1362	84355
788	26.7	6.0	0.9	chr1	43650656	43650878	(205305544)	C	MIRb	SINE/MIR	(8)	260	26	84649
256	18.6	1.9	7.0	chr1	43651011	43651081	(205305341)	C	L2c	LINE/L2	(2)	3424	3316	84650
919	19.6	9.1	1.5	chr1	43882606	43882807	(205073615)	C	MER58A	DNA/hAT-Charlie	(2)	222	4	85094
1876	14.6	0.0	2.4	chr1	43882940	43883267	(205073155)	C	AluJo	SINE/Alu	(0)	312	2	85095
346	22.0	14.8	4.5	chr1	44213112	44213244	(204743178)	C	MIRb	SINE/MIR	(34)	234	86	85684
30	21.0	0.0	0.0	chr1	44405166	44405226	(204551196)	+	(TG)n	Simple_repeat	1	61	(0)	85972
29	19.0	0.0	3.0	chr1	44405366	44405438	(204550984)	+	(GCC)n	Simple_repeat	1	70	(0)	85973
322	17.9	5.6	0.0	chr1	45586168	45586234	(203370188)	C	AluJb	SINE/Alu	(20)	282	212	88347
91	0.0	2.4	0.0	chr1	45586240	45586323	(203370099)	+	(GT)n	Simple_repeat	1	86	(0)	88348
1588	16.3	0.0	1.1	chr1	45586324	45586587	(203369835)	C	AluJb	SINE/Alu	(50)	262	2	88349
7300	4.4	0.2	0.8	chr1	45857606	45859158	(203097264)	C	L1PA5	LINE/L1	(5)	6149	4605	88921
12	17.6	8.9	0.0	chr1	46341238	46341282	(202615140)	+	(CCCTTT)n	Simple_repeat	1	49	(0)	89845
246	29.8	7.0	2.6	chr1	47724675	47724835	(201231587)	C	MIRb	SINE/MIR	(101)	167	6	92189
287	25.4	0.0	0.0	chr1	47936860	47937501	(201018921)	+	(CATCAT)n	Simple_repeat	1	642	(0)	92593
11547	22.6	6.2	3.9	chr1	51166900	51169107	(197787315)	C	ERVL-E-int	LTR/ERVL	(1830)	3837	1585	98066
1819	16.4	0.3	0.7	chr1	52560335	52560627	(196395795)	+	AluJr	SINE/Alu	1	292	(20)	101110
3997	13.9	0.0	5.5	chr1	52560628	52560730	(196395692)	+	L1MB3	LINE/L1	6050	6138	(45)	101106
2117	10.6	3.4	0.0	chr1	52560731	52561013	(196395409)	C	AluSq2	SINE/Alu	(20)	293	1	101111
762	24.9	23.5	0.3	chr1	54222536	54222878	(194733544)	+	L2a	LINE/L2	2090	2536	(883)	104703
329	27.9	2.3	1.1	chr1	54222876	54222962	(194733460)	+	L2a	LINE/L2	3338	3425	(1)	104703
1205	25.1	10.3	11.4	chr1	54686775	54687045	(194269377)	C	L1ME4b	LINE/L1	(0)	892	582	105662
51	0.0	0.0	0.0	chr1	54687046	54687091	(194269331)	+	(TTAT)n	Simple_repeat	1	46	(0)	105663
2139	9.2	0.0	0.3	chr1	54687092	54687373	(194269049)	C	AluSx1	SINE/Alu	(30)	282	2	105664
31171	7.2	1.5	1.6	chr1	55730142	55734486	(193221936)	+	HERVL-int	LTR/ERVL	1312	5652	(2)	107649
43327	6.8	0.4	1.5	chr1	57557525	57562090	(191394332)	+	HERVL-int	LTR/ERVL	2	4519	(1135)	111074
492	27.9	4.4	0.4	chr1	59382967	59383137	(189573285)	+	MIRb	SINE/MIR	7	195	(73)	114766
2151	11.5	0.0	0.3	chr1	62356003	62356288	(186600134)	+	AluSx1	SINE/Alu	1	285	(27)	120067
34	5.1	0.0	0.0	chr1	62356289	62356329	(186600093)	+	(AAAT)n	Simple_repeat	1	41	(0)	120068
754	23.7	5.4	5.0	chr1	62356330	62356426	(186599996)	C	MIR	SINE/MIR	(140)	122	31	120066
607	29.4	15.5	0.6	chr1	62356478	62356822	(186599600)	C	MLT1I	LTR/ERVL-MaLR	(1)	410	5	120069
294	26.6	14.9	1.6	chr1	63604670	63604860	(185351562)	C	MLT1J-int	LTR/ERVL-MaLR	(0)	1387	1167	122336
50	0.0	0.0	0.0	chr1	63604918	63604960	(185351462)	+	(TG)n	Simple_repeat	1	43	(0)	122337
1073	26.4	8.9	4.8	chr1	63605092	63605552	(185350870)	C	MLT1J-int	LTR/ERVL-MaLR	(451)	936	455	122336
554	5.3	2.6	0.0	chr1	63804628	63804703	(185151719)	C	L1PA7	LINE/L1	(1)	6153	6076	122739
3052	11.8	1.4	0.0	chr1	66443441	66443873	(182512549)	C	L1PA13	LINE/L1	(4)	6159	5721	127243
3017	25.4	10.4	2.8	chr1	66523441	66524803	(182431619)	+	ERVL-E-int	LTR/ERVL	1733	3248	(2419)	127354
53	0.0	0.0	0.0	chr1	66577757	66577801	(182378621)	+	(TG)n	Simple_repeat	1	45	(0)	127434
12	24.7	0.0	0.0	chr1	66577876	66577910	(182378512)	+	(TTTCTC)n	Simple_repeat	1	35	(0)	127435
4936	16.9	4.0	4.6	chr1	66840709	66841531	(182114891)	C	ERVL-B4-int	LTR/ERVL	(2498)	3216	2386	127851
1883	19.8	1.5	0.8	chr1	67133538	67133924	(181822498)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	128288
2326	7.3	1.0	1.6	chr1	67134000	67134302	(181822120)	C	AluSx1	SINE/Alu	(11)	301	1	128289
1497	32.4	4.8	1.4	chr1	75288595	75289160	(173667262)	+	ERVL-E-int	LTR/ERVL	2309	2894	(2773)	139748
42361	7.7	1.1	0.4	chr1	77182764	77187777	(171768645)	+	HERVL-int	LTR/ERVL	139	5210	(444)	142474
4079	22.2	5.8	1.2	chr1	78324799	78325862	(170630560)	C	ERVL-E-int	LTR/ERVL	(717)	4950	3814	144430
1621	24.3	3.3	0.3	chr1	78325858	78326208	(170630214)	C	ERVL-E-int	LTR/ERVL	(3100)	2567	2206	144430
26731	7.5	0.8	0.7	chr1	79930312	79933739	(169022683)	+	HERVL-int	LTR/ERVL	2225	5654	(0)	146508
8146	15.7	3.6	1.9	chr1	84028761	84029299	(164927123)	+	ERVL-B4-int	LTR/ERVL	2458	2993	(2721)	151973
1707	33.2	6.1	3.6	chr1	84050841	84051691	(164904731)	+	ERVL-E-int	LTR/ERVL	1688	2560	(3107)	152001
1410	19.8	15.9	0.3	chr1	84051692	84052035	(164904387)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	152002
801	23.2	5.1	8.4	chr1	84619844	84620186	(164336236)	C	MER4D	LTR/ERV1	(10)	893	563	152803
2268	9.4	0.0	0.0	chr1	84620194	84620511	(164335911)	C	AluSc	SINE/Alu	(0)	309	1	152804
12	16.9	0.0	0.0	chr1	84620578	84620604	(164335818)	+	(CTTC)n	Simple_repeat	1	27	(0)	152805
349	34.4	6.0	6.6	chr1	84718726	84719027	(164237395)	C	MamGypLTR1c	LTR/Gypsy	(11)	792	493	152970
40	0.0	0.0	0.0	chr1	85580463	85580496	(163375926)	+	(AC)n	Simple_repeat	1	34	(0)	154403
73	1.5	0.0	0.0	chr1	85580533	85580599	(163375823)	+	(AC)n	Simple_repeat	1	67	(0)	154403
3493	15.9	7.1	2.5	chr1	86883144	86883450	(162072972)	+	L1MB3	LINE/L1	5832	6169	(14)	156280
34	16.0	5.2	2.9	chr1	86883456	86883552	(162072870)	+	(ATAGTGT)n	Simple_repeat	1	102	(0)	156282
11	16.9	2.9	2.8	chr1	86883586	86883620	(162072802)	+	(ATTTAG)n	Simple_repeat	1	36	(0)	156283
16	16.9	8.3	3.9	chr1	87331365	87331436	(161624986)	+	(CTCCCGT)n	Simple_repeat	1	78	(0)	156912
15	15.5	0.0	5.0	chr1	87331556	87331595	(161624827)	+	G-rich	Low_complexity	1	40	(0)	156913
526	23.1	3.7	2.3	chr1	87808368	87808500	(161147922)	+	LTR52-int	LTR/ERVL	1723	1857	(1699)	157605
1050	23.1	5.8	3.0	chr1	87808505	87808808	(161147614)	+	LTR52	LTR/ERVL	109	421	(0)	157605
41811	6.7	1.6	0.7	chr1	88597910	88602327	(160354095)	+	HERVL-int	LTR/ERVL	1182	5654	(0)	158657
45372	6.7	0.9	0.4	chr1	88898894	88904109	(160052313)	+	HERVL-int	LTR/ERVL	426	5654	(0)	159188
21208	13.3	2.0	1.9	chr1	89345044	89348651	(159607771)	+	HERVL-int	LTR/ERVL	1801	5654	(0)	159747
31144	7.9	2.9	0.0	chr1	89438985	89443236	(159513186)	C	HERVL-int	LTR/ERVL	(1279)	4375	1	159853
2163	16.3	10.8	1.7	chr1	89723145	89723562	(159232860)	C	MLT1C	LTR/ERVL-MaLR	(6)	461	1	160237
2206	11.3	0.0	0.3	chr1	90855667	90855967	(158100455)	C	AluSq	SINE/Alu	(13)	300	1	161865
3635	28.8	1.8	9.4	chr1	91042293	91042770	(157913652)	+	HERVL-int	LTR/ERVL	1049	1527	(4140)	162139
14101	6.9	0.2	1.3	chr1	91042777	91044666	(157911756)	+	HERVL-int	LTR/ERVL	2319	4187	(1467)	162139
405	31.6	5.0	6.3	chr1	91798553	91798775	(157157647)	+	L2b	LINE/L2	3156	3375	(0)	163253
38	0.0	0.0	2.7	chr1	92030450	92030486	(156925936)	+	(TG)n	Simple_repeat	1	37	(0)	163749
22	7.3	0.0	0.0	chr1	92030487	92030515	(156925907)	+	(AG)n	Simple_repeat	1	29	(0)	163750
16382	7.0	0.6	0.5	chr1	94164123	94166151	(154790271)	C	HERVL-int	LTR/ERVL	(2288)	3366	1335	167383
1048	28.6	7.2	1.4	chr1	95572088	95572441	(153383981)	C	ERVL-E-int	LTR/ERVL	(2974)	2740	2365	169522
670	29.4	7.9	4.3	chr1	100661722	100662002	(148294420)	+	L2a	LINE/L2	3135	3426	(0)	176871
1598	27.0	16.5	1.4	chr1	102460479	102461067	(146495355)	C	L1M3c	LINE/L1	(4983)	1158	463	179325
562	28.1	7.8	1.3	chr1	102461072	102461226	(146495196)	C	L1M3c	LINE/L1	(5780)	361	196	179325
1006	15.6	0.6	1.2	chr1	102461227	102461395	(146495027)	C	AluSx	SINE/Alu	(16)	296	129	179326
30116	10.0	0.6	2.0	chr1	104578578	104582127	(144374295)	C	HERVL-int	LTR/ERVL	(1691)	3963	468	181848
1778	35.4	3.6	2.0	chr1	105905364	105906125	(143050297)	C	ERVL-E-int	LTR/ERVL	(2382)	3285	2511	183400
1808	24.9	3.0	2.6	chr1	105906189	105906687	(143049735)	+	MLT1D	LTR/ERVL-MaLR	1	501	(4)	183401
769	26.5	22.1	2.2	chr1	107476903	107477532	(141478890)	C	LTR50	LTR/ERVL	(4)	791	1	185495
1155	27.9	4.4	0.6	chr1	108065479	108065828	(140890594)	C	ERVL-E-int	LTR/ERVL	(3118)	2549	2186	186303
333	32.3	5.2	0.0	chr1	110177903	110178029	(138778393)	+	Tigger12	DNA/TcMar-Tigger	2	135	(2340)	189685
25	12.6	0.0	0.0	chr1	111990189	111990231	(136966191)	+	(GTGT)n	Simple_repeat	1	43	(0)	192420
14	31.8	4.0	0.0	chr1	111990232	111990262	(136966160)	+	G-rich	Low_complexity	1	77	(0)	192421
45774	6.8	0.6	0.2	chr1	112126466	112132095	(136824327)	C	HERVL-int	LTR/ERVL	(0)	5654	1	192617
568	26.2	8.4	3.1	chr1	112685929	112686279	(136270143)	+	MER102c	DNA/hAT-Charlie	62	443	(1985)	193588
199	23.9	22.8	0.0	chr1	112686337	112686407	(136270015)	+	L2b	LINE/L2	1986	2077	(1342)	193589
41	0.0	0.0	0.0	chr1	113308626	113308660	(135647762)	+	(GT)n	Simple_repeat	1	35	(0)	194835
25	6.4	0.0	0.0	chr1	113308661	113308693	(135647729)	+	(AG)n	Simple_repeat	1	33	(0)	194836
275	29.9	3.3	0.8	chr1	113308822	113308939	(135647483)	+	L4_C_Mam	LINE/RTE-X	4769	4889	(249)	194837
5947	13.0	3.4	0.5	chr1	113739453	113740746	(135215676)	C	L1MA5	LINE/L1	(3)	6297	4959	195435
138	21.7	6.0	3.4	chr1	114054065	114054562	(134901860)	+	(TG)n	Simple_repeat	1	528	(0)	196008
42764	6.6	1.3	1.0	chr1	114066556	114071477	(134884945)	C	HERVL-int	LTR/ERVL	(723)	4931	1	196029
22	0.0	0.0	0.0	chr1	115641538	115641561	(133314861)	+	(TG)n	Simple_repeat	1	24	(0)	198478
12	27.4	2.0	2.0	chr1	115641680	115641729	(133314693)	+	(GTGT)n	Simple_repeat	1	51	(0)	198479
50	0.0	0.0	0.0	chr1	116878181	116878223	(132078199)	+	(GT)n	Simple_repeat	1	43	(0)	200423
634	0.0	0.0	0.0	chr1	146035692	146035763	(102920659)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	211988
2228	8.4	0.7	0.7	chr1	146035980	146036276	(102920146)	C	AluSq	SINE/Alu	(16)	297	1	211989
17	17.4	0.0	2.9	chr1	147540964	147540998	(101415424)	+	(CT)n	Simple_repeat	1	35	(0)	214257
115	0.0	2.8	0.0	chr1	147541071	147541178	(101415244)	+	(GA)n	Simple_repeat	1	111	(0)	214258
41	6.0	0.0	0.0	chr1	147541179	147541230	(101415192)	+	(TG)n	Simple_repeat	1	52	(0)	214259
20	16.6	6.8	3.9	chr1	147541295	147541367	(101415055)	+	GA-rich	Low_complexity	1	78	(0)	214260
12	24.7	3.6	3.5	chr1	150235768	150235823	(98720599)	+	(TCT)n	Simple_repeat	1	58	(0)	218581
36	17.6	0.0	2.8	chr1	150236005	150236075	(98720347)	+	(CA)n	Simple_repeat	1	71	(0)	218582
2884	13.7	5.5	1.5	chr1	151907955	151908832	(97047590)	+	MER61-int	LTR/ERV1	247	1272	(3945)	222090
22	3.8	0.0	0.0	chr1	151941277	151941303	(97015119)	+	(CT)n	Simple_repeat	1	27	(0)	222159
23	7.2	0.0	0.0	chr1	151941303	151941332	(97015090)	+	(CA)n	Simple_repeat	1	30	(0)	222160
47	4.3	0.0	0.0	chr1	151941390	151941438	(97014984)	+	(AC)n	Simple_repeat	1	49	(0)	222161
2392	5.6	0.3	0.3	chr1	155194029	155194314	(93762108)	+	AluSg4	SINE/Alu	6	291	(19)	227524
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
2139	18.9	2.2	6.8	chr1	155636567	155636991	(93319431)	C	HERV17-int	LTR/ERV1	(7690)	567	125	228462
271	25.7	23.6	0.0	chr1	156946376	156946488	(92009934)	C	MIRc	SINE/MIR	(102)	166	19	231021
2587	30.6	0.9	0.6	chr1	159516161	159516946	(89439476)	C	ERVL-E-int	LTR/ERVL	(2916)	2751	1964	234398
71	1.6	0.0	0.0	chr1	161097673	161097737	(87858685)	+	(TC)n	Simple_repeat	1	65	(0)	236861
38	4.3	0.0	2.0	chr1	161097738	161097777	(87858645)	+	(TG)n	Simple_repeat	2	41	(0)	236862
346	27.4	11.1	3.0	chr1	161097880	161098011	(87858411)	C	MIR3	SINE/MIR	(63)	145	2	236863
2256	10.6	0.3	0.7	chr1	161115061	161115363	(87841059)	C	AluSx1	SINE/Alu	(10)	302	1	236908
2709	13.8	15.0	2.6	chr1	161115364	161115875	(87840547)	+	MER44D	DNA/TcMar-Tigger	109	703	(2)	236907
42903	7.0	1.0	0.3	chr1	161434927	161438569	(87517853)	C	HERVL-int	LTR/ERVL	(1967)	3687	1	237531
2120	4.4	0.0	0.0	chr1	161538999	161539249	(87417173)	C	L1PA5	LINE/L1	(198)	5956	5706	237689
1289	10.8	3.5	0.0	chr1	161539250	161539444	(87416978)	+	L1PA5	LINE/L1	5938	6139	(15)	237689
12908	17.3	2.6	0.1	chr1	164027839	164030043	(84926379)	C	ERVL-B4-int	LTR/ERVL	(2177)	3537	1274	241560
302	9.8	6.7	3.5	chr1	167056409	167057078	(81899344)	+	(GT)n	Simple_repeat	1	715	(0)	246072
249	29.7	3.9	1.3	chr1	167057131	167057205	(81899217)	+	MIRc	SINE/MIR	94	170	(98)	246073
3487	20.0	5.1	0.9	chr1	167665067	167665813	(81290609)	C	L1ME1	LINE/L1	(120)	6059	5280	247093
1949	16.9	5.5	1.4	chr1	167984837	167985184	(80971238)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	247637
54	0.0	3.8	0.0	chr1	167985185	167985237	(80971185)	+	(GT)n	Simple_repeat	1	55	(0)	247638
2046	21.0	5.9	4.4	chr1	167985253	167985705	(80970717)	C	MLT1D	LTR/ERVL-MaLR	(45)	460	1	247639
1396	18.8	8.7	11.9	chr1	170636569	170636972	(78319450)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	251568
29693	15.9	2.0	1.9	chr1	170937823	170942366	(78014056)	C	ERVL-B4-int	LTR/ERVL	(412)	5302	745	251998
44874	6.9	1.5	0.1	chr1	175242967	175248539	(73707883)	+	HERVL-int	LTR/ERVL	1	5654	(0)	258439
151	23.6	0.3	0.0	chr1	175765413	175765740	(73190682)	+	(TGGTGG)n	Simple_repeat	1	329	(0)	259182
2258	7.3	4.3	0.0	chr1	179365099	179365387	(69591035)	+	AluSx4	SINE/Alu	3	304	(6)	264717
1329	12.6	0.0	0.0	chr1	179365392	179365573	(69590849)	+	AluSq2	SINE/Alu	130	311	(2)	264718
3579	31.9	5.5	4.9	chr1	179935300	179936327	(69020095)	C	ERV24_Prim-int	LTR/ERV1	(4077)	3498	2488	265560
203	33.3	7.1	1.7	chr1	180208204	180208377	(68748045)	+	L2c	LINE/L2	2333	2516	(903)	266040
176	25.7	3.0	1.7	chr1	182236633	182237196	(66719226)	+	(AC)n	Simple_repeat	1	581	(0)	269069
181	28.6	10.5	6.3	chr1	182393939	182394065	(66562357)	+	L2c	LINE/L2	3245	3377	(10)	269395
408	21.4	0.0	0.0	chr1	182394086	182394155	(66562267)	C	MamSINE1	SINE/tRNA-RTE	(38)	252	183	269396
604	31.1	6.9	0.5	chr1	182429484	182429674	(66526748)	C	MIRb	SINE/MIR	(39)	229	26	269457
194	20.4	0.0	0.0	chr1	182429859	182429902	(66526520)	C	L2c	LINE/L2	(59)	3328	3285	269458
453	27.8	1.8	0.0	chr1	182430041	182430148	(66526274)	+	MIRc	SINE/MIR	57	166	(102)	269459
1079	25.6	6.0	1.3	chr1	182605581	182605897	(66350525)	C	LTR16	LTR/ERVL	(0)	438	106	269735
238	23.6	0.0	3.5	chr1	182605968	182606024	(66350398)	+	MIR	SINE/MIR	198	252	(10)	269734
1427	33.1	5.5	6.0	chr1	182998289	182999240	(65957182)	C	ERVL-E-int	LTR/ERVL	(1887)	3780	2794	270413
41	4.1	1.9	1.9	chr1	184386769	184386820	(64569602)	+	(AC)n	Simple_repeat	1	53	(0)	272566
38236	9.7	2.7	0.0	chr1	190669590	190675094	(58281328)	C	HERVL-int	LTR/ERVL	(0)	5654	2	281209
24727	13.6	1.5	1.2	chr1	191234763	191240322	(57716100)	+	HERVL-int	LTR/ERVL	1	5654	(0)	281891
17467	15.1	6.0	6.7	chr1	193379150	193381372	(55575050)	C	HERVL-int	LTR/ERVL	(1736)	3918	1644	284783
1477	3.7	0.2	9.1	chr1	201255823	201258601	(47697821)	+	(AGTGATGG)n	Simple_repeat	1	2786	(0)	295734
42	0.0	0.0	0.0	chr1	201435916	201435951	(47520471)	+	(TG)n	Simple_repeat	1	36	(0)	296005
20	16.3	0.0	0.0	chr1	201435953	201435987	(47520435)	+	GA-rich	Low_complexity	1	35	(0)	296006
318	19.0	2.0	4.4	chr1	201641906	201642217	(47314205)	+	(CCTT)n	Simple_repeat	1	306	(0)	296410
2066	7.1	5.7	4.4	chr1	201642218	201642511	(47313911)	C	AluY	SINE/Alu	(13)	298	1	296411
2160	22.6	10.7	4.0	chr1	202682891	202683458	(46272964)	+	L1ME3	LINE/L1	5280	5909	(253)	298307
989	16.9	3.9	0.8	chr1	202846493	202846730	(46109692)	+	MLT1B	LTR/ERVL-MaLR	116	390	(0)	298610
356	31.1	8.8	4.3	chr1	203519846	203520037	(45436385)	C	MIRb	SINE/MIR	(30)	238	20	299746
165	21.4	2.7	3.1	chr1	203526932	203527567	(45428855)	+	(CA)n	Simple_repeat	1	633	(0)	299758
241	36.2	3.1	0.0	chr1	203751061	203751154	(45205268)	+	MIR3	SINE/MIR	17	113	(95)	300222
2199	13.0	0.0	0.3	chr1	203751385	203751691	(45204731)	C	AluSp	SINE/Alu	(7)	306	1	300223
44045	6.2	0.6	0.7	chr1	204235080	204240742	(44715680)	+	HERVL-int	LTR/ERVL	1	5654	(0)	301222
1735	18.4	7.2	0.0	chr1	204309355	204309675	(44646747)	+	Tigger3a	DNA/TcMar-Tigger	1	346	(2)	301322
1520	31.0	3.4	1.5	chr1	204755375	204755921	(44200501)	+	ERVL-E-int	LTR/ERVL	1615	2172	(3495)	302192
189	28.4	1.5	4.3	chr1	204987804	204987873	(43968549)	C	L3	LINE/CR1	(3799)	300	233	302606
58	1.9	0.0	0.0	chr1	205229154	205229207	(43727215)	+	(TG)n	Simple_repeat	1	54	(0)	303045
2297	5.8	1.1	0.0	chr1	205229208	205229485	(43726937)	C	AluSx1	SINE/Alu	(31)	281	1	303046
3044	21.4	11.4	3.5	chr1	205654865	205655567	(43300855)	+	L1MC5a	LINE/L1	1259	2000	(777)	303858
1024	22.3	5.8	4.3	chr1	205793593	205793986	(43162436)	+	L1ME4b	LINE/L1	489	888	(4)	304111
1011	15.7	6.4	2.5	chr1	205972783	205975447	(42980975)	+	(CA)n	Simple_repeat	1	2768	(0)	304363
456	15.3	6.0	1.5	chr1	206003837	206004902	(42951520)	+	(AC)n	Simple_repeat	1	1130	(0)	304414
412	21.6	3.0	2.9	chr1	206923601	206924793	(42031629)	+	(GT)n	Simple_repeat	1	1229	(0)	305929
45	2.4	0.0	0.0	chr1	207824032	207824074	(41132348)	+	(CT)n	Simple_repeat	1	43	(0)	307172
13	15.2	2.5	4.9	chr1	207824230	207824269	(41132153)	+	(TCACC)n	Simple_repeat	1	41	(0)	307173
2498	8.7	0.0	0.0	chr1	208188427	208188735	(40767687)	+	AluSq	SINE/Alu	1	309	(4)	307742
243	33.0	1.7	3.3	chr1	208188736	208188820	(40767602)	+	MIRc	SINE/MIR	156	238	(30)	307741
1610	26.4	7.7	3.6	chr1	211005354	211006679	(37949743)	+	L1ME3	LINE/L1	4733	6132	(30)	311980
2074	12.9	0.0	0.0	chr1	212483557	212483858	(36472564)	+	AluSq	SINE/Alu	1	302	(11)	314596
1536	18.7	6.3	9.3	chr1	212656492	212656868	(36299554)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	314916
392	31.3	3.0	4.4	chr1	212656880	212657083	(36299339)	C	MIRb	SINE/MIR	(47)	221	21	314917
191	18.6	4.4	0.0	chr1	214549989	214550031	(34406391)	+	L2c	LINE/L2	3041	3085	(341)	317876
218	21.4	16.2	3.9	chr1	214550144	214550245	(34406177)	+	L2c	LINE/L2	3271	3387	(0)	317876
1182	34.3	5.8	3.1	chr1	214880842	214882050	(34074372)	C	ERVL-E-int	LTR/ERVL	(2756)	2898	1655	318318
29493	16.4	6.1	1.0	chr1	217310053	217315360	(31641062)	+	ERVL-B4-int	LTR/ERVL	5	5595	(119)	321546
5198	10.4	0.1	0.4	chr1	218281752	218282503	(30673919)	+	L1PA8	LINE/L1	5423	6172	(0)	322992
2223	11.3	5.2	1.1	chr1	218882886	218883250	(30073172)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	323887
1094	15.7	0.6	0.0	chr1	219326953	219327124	(29629298)	+	AluSc	SINE/Alu	135	307	(2)	324457
289	23.2	8.2	3.5	chr1	220514714	220514829	(28441593)	+	Charlie10	DNA/hAT-Charlie	1	122	(2700)	326347
166	20.5	0.0	0.6	chr1	223297872	223298204	(25658218)	+	(GGAT)n	Simple_repeat	1	333	(0)	330492
3112	29.5	9.4	3.8	chr1	223414014	223415326	(25541096)	+	L1ME3A	LINE/L1	1862	3257	(2889)	330648
1566	13.9	1.3	13.0	chr1	223415327	223415679	(25540743)	+	AluJb	SINE/Alu	2	312	(0)	330652
2146	13.4	0.0	0.0	chr1	223696873	223697162	(25259260)	+	AluJb	SINE/Alu	1	290	(22)	331047
29	25.4	0.0	4.1	chr1	224011297	224011393	(24945029)	+	GA-rich	Low_complexity	1	97	(0)	331631
12	22.1	0.0	0.0	chr1	224011367	224011398	(24945024)	+	(GAAC)n	Simple_repeat	1	32	(0)	331632
574	14.7	3.3	0.0	chr1	224011568	224011683	(24944739)	C	MER67C	LTR/ERV1	(0)	711	592	331633
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
2799	20.1	10.2	2.0	chr1	224106414	224107053	(24849369)	C	LTR41	LTR/ERVL	(70)	698	1	331803
2087	11.4	0.0	0.0	chr1	225442582	225442853	(23513569)	+	AluSx3	SINE/Alu	13	284	(27)	333980
56	0.0	0.0	0.0	chr1	225442854	225442901	(23513521)	+	(AC)n	Simple_repeat	1	48	(0)	333981
1938	13.6	7.4	2.7	chr1	225605612	225605982	(23350440)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	334217
1931	9.5	4.7	2.6	chr1	225654650	225654965	(23301457)	+	AluSx	SINE/Alu	2	312	(0)	334308
2181	7.8	0.0	1.1	chr1	226123000	226123282	(22833140)	C	AluSx1	SINE/Alu	(22)	290	11	335250
1454	8.3	0.0	0.0	chr1	226221533	226221712	(22734710)	C	AluSx	SINE/Alu	(0)	312	133	335475
2366	6.6	0.0	1.7	chr1	226221718	226222047	(22734375)	C	AluY	SINE/Alu	(0)	311	1	335476
44	0.0	0.0	0.0	chr1	226711406	226711443	(22244979)	+	(AG)n	Simple_repeat	1	38	(0)	336323
26	3.0	2.9	0.0	chr1	226711444	226711477	(22244945)	+	(TG)n	Simple_repeat	1	35	(0)	336324
53	0.0	0.0	0.0	chr1	227953874	227953918	(21002504)	+	(GT)n	Simple_repeat	1	45	(0)	338094
49	3.0	4.1	2.6	chr1	227953919	227953991	(21002431)	+	(AGAGAC)n	Simple_repeat	1	76	(0)	338095
148	12.4	5.3	0.0	chr1	228041373	228041653	(20914769)	+	(ATCC)n	Simple_repeat	1	296	(0)	338219
275	15.5	9.3	0.1	chr1	228042403	228043119	(20913303)	+	(GATG)n	Simple_repeat	1	784	(0)	338223
2201	8.3	1.4	0.0	chr1	228103519	228103807	(20852615)	+	AluSz	SINE/Alu	1	293	(19)	338294
645	15.3	17.5	0.0	chr1	228103818	228103954	(20852468)	+	FRAM	SINE/Alu	1	166	(10)	338295
1740	33.2	6.3	8.6	chr1	228128373	228128737	(20827685)	+	ERV24_Prim-int	LTR/ERV1	2872	3234	(4341)	338319
2489	6.4	0.0	0.0	chr1	228128738	228129034	(20827388)	C	AluY	SINE/Alu	(14)	297	1	338329
489	15.1	4.7	2.3	chr1	228781826	228782947	(20173475)	+	(TG)n	Simple_repeat	1	1175	(0)	339185
2566	6.5	0.0	0.3	chr1	228843165	228843470	(20112952)	+	AluY	SINE/Alu	1	305	(6)	339275
827	28.3	11.1	2.6	chr1	228945180	228945524	(20010898)	+	MLT1I	LTR/ERVL-MaLR	34	411	(0)	339441
2255	11.2	0.3	0.0	chr1	228971867	228972162	(19984260)	+	AluSp	SINE/Alu	2	298	(15)	339483
505	30.9	7.4	6.2	chr1	228972163	228972208	(19984214)	C	Charlie22a	DNA/hAT-Charlie	(326)	165	133	339482
46	0.0	0.0	0.0	chr1	228972209	228972247	(19984175)	+	(TG)n	Simple_repeat	1	39	(0)	339484
2318	7.1	1.4	0.0	chr1	228972248	228972529	(19983893)	C	AluSp	SINE/Alu	(27)	286	1	339485
505	30.9	7.4	6.2	chr1	228972530	228972654	(19983768)	C	Charlie22a	DNA/hAT-Charlie	(359)	132	3	339482
101	23.7	6.9	2.7	chr1	228977723	228978170	(19978252)	+	(GT)n	Simple_repeat	1	479	(0)	339498
18	13.7	0.0	6.5	chr1	229423011	229423057	(19533365)	+	(ATGGT)n	Simple_repeat	1	43	(0)	340240
480	32.1	7.5	9.9	chr1	229423121	229423389	(19533033)	+	L1MEd	LINE/L1	510	809	(6277)	340241
2347	14.0	1.3	3.3	chr1	229802910	229803307	(19153115)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	340925
8216	23.5	5.9	4.7	chr1	229918323	229919673	(19036749)	+	BLACKJACK	DNA/hAT-Blackjack	1411	2768	(201)	341117
50	0.0	0.0	0.0	chr1	229919680	229919724	(19036698)	+	(TATT)n	Simple_repeat	1	45	(0)	341121
2265	8.6	0.0	2.1	chr1	229919725	229920008	(19036414)	C	AluSc5	SINE/Alu	(28)	281	2	341122
1730	20.3	1.0	2.0	chr1	229952134	229952428	(19003994)	C	AluJr	SINE/Alu	(20)	292	1	341180
1056	27.5	7.6	5.9	chr1	229952429	229952471	(19003951)	+	MSTD	LTR/ERVL-MaLR	366	394	(2)	341179
919	25.3	5.3	8.9	chr1	229952472	229952503	(19003919)	C	MLT1A1	LTR/ERVL-MaLR	(383)	25	1	341173
1516	24.6	6.7	3.7	chr1	229952555	229953053	(19003369)	+	L1ME3A	LINE/L1	5632	6146	(27)	341181
2613	10.8	2.3	0.3	chr1	230503067	230503448	(18452974)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	341980
584	14.3	0.0	1.2	chr1	230503466	230503549	(18452873)	+	AluJr	SINE/Alu	2	84	(228)	341981
123	23.1	3.2	4.9	chr1	232031107	232031540	(16924882)	+	GA-rich	Low_complexity	1	448	(0)	344404
30037	9.4	1.3	1.2	chr1	232197077	232201638	(16754784)	C	HERVL-int	LTR/ERVL	(0)	5654	1022	344640
41	29.0	0.0	0.0	chr1	232320065	232320180	(16636242)	+	(CACA)n	Simple_repeat	1	116	(0)	344817
48	0.0	0.0	0.0	chr1	232320241	232320281	(16636141)	+	(AG)n	Simple_repeat	1	41	(0)	344818
2281	10.2	2.1	0.0	chr1	232540901	232541223	(16415199)	+	L1PA10	LINE/L1	5796	6125	(43)	345059
73	1.4	0.0	1.4	chr1	232541229	232541302	(16415120)	+	(ACATA)n	Simple_repeat	1	74	(0)	345060
83	16.5	3.8	5.3	chr1	232635351	232635586	(16320836)	+	GA-rich	Low_complexity	1	245	(0)	345185
2153	10.0	1.0	1.7	chr1	232679015	232679315	(16277107)	C	AluSc8	SINE/Alu	(12)	299	1	345247
587	30.2	13.0	4.0	chr1	233286332	233286604	(15669818)	+	LTR78	LTR/ERV1	328	628	(676)	346148
38	0.0	0.0	0.0	chr1	234491193	234491225	(14465197)	+	(AC)n	Simple_repeat	1	33	(0)	347951
23	12.6	0.0	0.0	chr1	234491226	234491260	(14465162)	+	(GA)n	Simple_repeat	1	35	(0)	347952
2213	9.8	2.6	0.0	chr1	234501325	234501619	(14454803)	+	AluSc	SINE/Alu	1	303	(6)	347977
55	0.0	0.0	0.0	chr1	234545000	234545046	(14411376)	+	(GT)n	Simple_repeat	1	47	(0)	348059
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
180	30.0	1.2	9.1	chr1	234747183	234747270	(14209152)	C	MIR3	SINE/MIR	(7)	201	121	348373
1888	15.0	0.0	2.9	chr1	235364029	235364342	(13592080)	C	AluSz	SINE/Alu	(7)	305	1	349586
2128	11.8	0.0	0.0	chr1	235364359	235364683	(13591739)	C	AluSg	SINE/Alu	(0)	310	1	349587
237	13.3	0.0	2.2	chr1	235505770	235505815	(13450607)	C	MLT1K	LTR/ERVL-MaLR	(30)	565	521	349880
2400	8.9	0.0	0.0	chr1	235505820	235506122	(13450300)	+	AluSx1	SINE/Alu	8	310	(2)	349881
203	31.8	3.3	0.2	chr1	235587106	235587927	(13368495)	+	(TG)n	Simple_repeat	1	849	(0)	350048
2299	12.1	0.0	0.0	chr1	235862514	235862803	(13093619)	+	AluSx1	SINE/Alu	1	290	(22)	350507
49	0.0	0.0	0.0	chr1	235862807	235862848	(13093574)	+	(AC)n	Simple_repeat	1	42	(0)	350508
839	15.3	2.8	0.0	chr1	235862872	235863008	(13093414)	+	LTR54	LTR/ERV1	370	510	(0)	350504
2099	12.4	0.0	2.0	chr1	236098036	236098334	(12858088)	+	AluSz	SINE/Alu	1	293	(19)	350997
132	5.0	8.4	1.6	chr1	236098335	236098572	(12857850)	+	(GGAAG)n	Simple_repeat	1	258	(0)	350998
38	34.9	2.1	5.9	chr1	236098573	236098599	(12857823)	+	GA-rich	Low_complexity	20	272	(0)	350999
651	20.3	3.0	2.3	chr1	236098664	236098794	(12857628)	+	MIR	SINE/MIR	7	138	(124)	351000
253	23.5	3.3	0.6	chr1	236101445	236102135	(12854287)	+	(TG)n	Simple_repeat	1	714	(0)	351005
2682	8.2	0.0	0.6	chr1	236163474	236163830	(12792592)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	351120
196	29.8	0.0	0.0	chr1	236211778	236211824	(12744598)	C	L2a	LINE/L2	(16)	3410	3364	351182
87	11.3	3.5	3.4	chr1	236685632	236685804	(12270618)	+	GA-rich	Low_complexity	1	179	(0)	352101
301	12.2	3.5	6.1	chr1	236685805	236685952	(12270470)	+	HERV17-int	LTR/ERV1	704	847	(7779)	352102
40	14.7	3.0	4.9	chr1	236685955	236686053	(12270369)	+	GA-rich	Low_complexity	1	102	(0)	352103
2523	8.8	1.6	0.3	chr1	237152644	237153007	(11803415)	+	L1PA10	LINE/L1	4978	5346	(800)	352843
221	30.1	7.8	4.6	chr1	241180684	241180770	(7775652)	+	MIR3	SINE/MIR	5	94	(114)	358885
476	29.7	4.4	7.3	chr1	241180760	241180912	(7775510)	+	MIRb	SINE/MIR	11	164	(104)	358886
1055	18.3	2.6	3.8	chr1	241424635	241424984	(7531438)	+	MER52D	LTR/ERV1	470	884	(1239)	359283
23433	10.3	1.6	3.0	chr1	241424986	241431394	(7525028)	C	L1PA7	LINE/L1	(5)	6464	1	359284
23542	16.2	2.0	2.4	chr1	241450793	241455070	(7501352)	C	ERVL-B4-int	LTR/ERVL	(2)	5712	1452	359303
1876	14.0	2.4	0.3	chr1	243432208	243432530	(5523892)	+	L1PA13	LINE/L1	5815	6144	(19)	362586
1410	27.1	9.8	4.4	chr1	243432531	243432687	(5523735)	+	Charlie21a	DNA/hAT-Charlie	699	841	(372)	362585
6925	24.4	6.8	8.2	chr1	244006181	244007949	(4948473)	+	ERV3-16A3_I-int	LTR/ERVL	2068	3846	(1380)	363456
394	31.3	5.3	2.2	chr1	245737934	245738116	(3218306)	C	ERVL-E-int	LTR/ERVL	(2677)	3037	2849	366459
782	31.7	5.3	1.2	chr1	245738130	245738384	(3218038)	C	ERVL-E-int	LTR/ERVL	(2923)	2744	2479	366459
1401	29.3	8.0	5.5	chr1	245738392	245738611	(3217811)	C	ERVL-E-int	LTR/ERVL	(4150)	1517	1291	366459
32601	17.3	2.5	1.9	chr1	247782785	247787524	(1168898)	C	ERVL-int	LTR/ERVL	(2)	5755	1024	369633
988	28.4	4.1	2.1	chr10	164354	164684	(133632738)	C	MLT1I	LTR/ERVL-MaLR	(6)	405	68	371228
301	28.1	1.0	3.0	chr10	164696	164794	(133632628)	+	HAL1	LINE/L1	2147	2243	(264)	371229
293	24.8	3.4	4.2	chr10	1498792	1499934	(132297488)	+	(TCATCAT)n	Simple_repeat	1	1182	(0)	372646
44	0.0	0.0	0.0	chr10	5554771	5554808	(128242614)	+	(AC)n	Simple_repeat	1	38	(0)	377917
20	13.7	0.0	0.0	chr10	5554809	5554840	(128242582)	+	(TC)n	Simple_repeat	1	32	(0)	377918
33	0.0	0.0	0.0	chr10	5554942	5554969	(128242453)	+	(GT)n	Simple_repeat	1	28	(0)	377919
19	16.5	2.0	3.9	chr10	7234210	7234260	(126563162)	+	A-rich	Low_complexity	1	52	(0)	380708
296	25.4	2.6	3.4	chr10	7235292	7235409	(126562013)	+	L1MEd	LINE/L1	653	769	(6334)	380711
66	16.7	3.6	3.5	chr10	7235488	7235652	(126561770)	+	(AC)n	Simple_repeat	1	171	(0)	380712
293	31.7	3.3	0.0	chr10	7235661	7235805	(126561617)	+	L1MEd	LINE/L1	2497	2646	(3500)	380711
329	15.2	4.3	0.0	chr10	11987107	11987172	(121810250)	+	L1ME3	LINE/L1	6017	6085	(77)	387896
982	12.3	0.0	1.3	chr10	11987189	11987344	(121810078)	+	L1PA11	LINE/L1	6021	6174	(0)	387897
2346	14.0	6.3	4.3	chr10	12652937	12653355	(121144067)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	389348
9955	26.7	4.6	1.9	chr10	13003971	13006665	(120790757)	C	ERVL-E-int	LTR/ERVL	(811)	4856	2087	389946
83	28.9	1.2	0.8	chr10	14604707	14604958	(119192464)	+	(CT)n	Simple_repeat	1	255	(0)	392731
26658	8.2	1.0	0.4	chr10	16167828	16171514	(117625908)	C	HERVL-int	LTR/ERVL	(1944)	3710	1	395352
2422	15.7	6.6	0.7	chr10	16186687	16187129	(117610293)	+	MER21B	LTR/ERVL	24	494	(374)	395367
2440	14.4	0.0	0.3	chr10	16187137	16187525	(117609897)	C	ERVL-B4-int	LTR/ERVL	(3034)	2723	2336	395366
12950	8.3	0.1	0.1	chr10	16447745	16449379	(117348043)	C	HERVL-int	LTR/ERVL	(1979)	3675	2041	395840
2219	16.7	1.9	0.3	chr10	16489986	16490345	(117307077)	C	MER47A	DNA/TcMar-Tigger	(0)	366	1	395940
348	35.3	9.4	7.2	chr10	16490346	16490722	(117306700)	C	L1MEd	LINE/L1	(6679)	424	27	395935
49	0.0	0.0	0.0	chr10	16661288	16661329	(117136093)	+	(GT)n	Simple_repeat	1	42	(0)	396204
797	32.4	7.6	8.1	chr10	16661330	16661996	(117135426)	C	L1MEd	LINE/L1	(6415)	688	44	396198
340	26.9	11.2	4.7	chr10	17725510	17725809	(116071613)	C	L1MC5a	LINE/L1	(224)	2553	2232	397911
253	32.8	13.1	4.3	chr10	17725881	17726157	(116071265)	+	MARNA	DNA/TcMar-Mariner	28	332	(254)	397912
36	29.0	0.0	0.0	chr10	21098180	21098276	(112699146)	+	(AC)n	Simple_repeat	1	97	(0)	402976
197	27.1	1.4	7.9	chr10	21098335	21098410	(112699012)	+	L2c	LINE/L2	3309	3379	(8)	402977
673	0.0	0.0	0.0	chr10	22229508	22229582	(111567840)	C	tRNA-Asn-AAC	tRNA	(2)	75	1	404961
7666	25.9	4.0	2.7	chr10	27424845	27426997	(106370425)	+	ERVL-B4-int	LTR/ERVL	3	2184	(3483)	413414
13398	18.1	6.3	2.6	chr10	27427002	27427356	(106370066)	+	ERVL-B4-int	LTR/ERVL	2419	2804	(2910)	413414
811	16.4	0.0	1.6	chr10	27427357	27427484	(106369938)	+	FLAM_C	SINE/Alu	1	126	(17)	413416
309	31.9	2.2	1.5	chr10	27656625	27656761	(106140661)	C	MER5A	DNA/hAT-Charlie	(51)	138	1	413788
69	0.0	0.0	0.0	chr10	27656822	27656880	(106140542)	+	(GT)n	Simple_repeat	1	59	(0)	413789
28	0.0	2.8	0.0	chr10	27656881	27656912	(106140510)	+	(AG)n	Simple_repeat	2	34	(0)	413790
1464	32.0	3.1	2.0	chr10	28426133	28426801	(105370621)	+	ERVL-E-int	LTR/ERVL	2143	2842	(2154)	415070
1906	15.6	0.7	0.7	chr10	28426830	28427118	(105370304)	+	AluJr	SINE/Alu	1	289	(23)	415071
122	33.2	0.2	0.7	chr10	29968819	29969249	(103828173)	+	(TG)n	Simple_repeat	1	432	(0)	417811
2257	16.6	3.5	4.6	chr10	30803093	30803552	(102993870)	+	MLT1C	LTR/ERVL-MaLR	13	467	(0)	419393
2187	30.8	6.5	5.7	chr10	31739581	31741406	(102056016)	+	ERVL-E-int	LTR/ERVL	967	2830	(2837)	420673
36593	8.9	0.3	0.6	chr10	32797694	32802532	(100994890)	C	HERVL-int	LTR/ERVL	(828)	4826	1	422340
1050	25.8	16.7	2.6	chr10	33145429	33145931	(100651491)	C	MLT1G1	LTR/ERVL-MaLR	(2)	577	1	422850
1795	14.8	3.8	0.7	chr10	34550230	34550512	(99246910)	C	AluJr	SINE/Alu	(20)	292	1	424882
20955	7.4	0.2	0.6	chr10	36473569	36476361	(97321061)	+	HERVL-int	LTR/ERVL	356	3138	(2516)	428057
2556	3.7	0.0	1.7	chr10	43267264	43267561	(90529861)	+	AluY	SINE/Alu	17	309	(2)	433141
6605	12.0	3.9	7.1	chr10	43469965	43470142	(90327280)	+	Tigger1	DNA/TcMar-Tigger	2237	2416	(2)	433595
44675	6.7	1.4	1.2	chr10	43510846	43514128	(90283294)	C	HERVL-int	LTR/ERVL	(662)	4992	1731	433712
456	19.5	3.7	3.3	chr10	46525398	46526683	(87270739)	+	(CA)n	Simple_repeat	1	1334	(0)	437801
1702	15.7	6.3	5.6	chr10	48634704	48635081	(85162341)	+	MLT1B	LTR/ERVL-MaLR	7	387	(3)	440813
42494	7.0	1.2	1.1	chr10	48991349	48995915	(84801507)	C	HERVL-int	LTR/ERVL	(0)	5654	1099	441294
40713	9.1	1.1	0.8	chr10	57136796	57140974	(76656448)	+	HERVL-int	LTR/ERVL	1411	5654	(0)	452348
289	30.0	9.1	0.7	chr10	60198996	60199136	(73598286)	+	MER91A	DNA/hAT-Tip100	18	171	(25)	456723
2627	10.6	8.2	5.7	chr10	61232797	61233043	(72564379)	+	MER4-int	LTR/ERV1	3051	3330	(3268)	458279
1696	10.0	0.0	3.4	chr10	61568974	61569212	(72228210)	C	AluSq2	SINE/Alu	(16)	297	67	458750
43473	7.4	1.3	0.5	chr10	61569216	61571867	(72225555)	C	HERVL-int	LTR/ERVL	(2953)	2701	1	458749
72	1.5	1.4	0.0	chr10	61623835	61623903	(72173519)	+	(TC)n	Simple_repeat	1	70	(0)	458827
1896	14.6	1.2	3.9	chr10	62356005	62356340	(71441082)	C	ERVL-B4-int	LTR/ERVL	(575)	5139	4813	459937
19352	14.7	2.6	1.1	chr10	62356338	62358148	(71439274)	+	ERVL-int	LTR/ERVL	2363	4195	(1562)	459938
255	25.6	9.7	5.5	chr10	62983711	62983838	(70813584)	C	L1ME4c	LINE/L1	(62)	768	635	460924
28774	11.3	2.2	0.4	chr10	64888022	64890115	(68907307)	+	HERVL-int	LTR/ERVL	1084	3245	(2409)	464031
445	33.0	5.1	3.6	chr10	64998282	64998735	(68798687)	+	ERVL-E-int	LTR/ERVL	2178	2675	(2321)	464151
43009	7.7	1.1	0.4	chr10	65504008	65509618	(68287804)	C	HERVL-int	LTR/ERVL	(0)	5654	2	464842
2000	27.9	7.6	5.0	chr10	67298199	67298928	(66498494)	C	ERVL-E-int	LTR/ERVL	(2298)	2928	2257	467298
1646	9.6	9.1	0.0	chr10	67298929	67299147	(66498275)	C	AluSc	SINE/Alu	(19)	290	50	467300
2134	14.0	0.0	0.7	chr10	68147146	68147452	(65649970)	C	AluSz6	SINE/Alu	(3)	309	5	468607
589	16.8	2.1	6.8	chr10	68147453	68147524	(65649898)	C	MIR	SINE/MIR	(103)	159	92	468606
461	26.9	17.2	9.7	chr10	68147526	68148052	(65649370)	C	MamGypLTR1a	LTR/Gypsy	(205)	579	5	468604
2222	11.2	0.0	2.3	chr10	69217576	69217879	(64579543)	C	AluSx1	SINE/Alu	(15)	297	1	471123
538	31.2	1.4	5.5	chr10	69821108	69821324	(63976098)	C	MER102b	DNA/hAT-Charlie	(123)	218	11	472323
519	17.1	16.7	7.3	chr10	70648417	70648567	(63148855)	+	LTR40b	LTR/ERVL	1	168	(351)	473881
2302	16.5	1.4	0.0	chr10	70648593	70648944	(63148478)	+	LTR18A	LTR/ERVL	1	357	(0)	473882
32402	6.8	0.8	0.2	chr10	71017231	71021414	(62776008)	C	HERVL-int	LTR/ERVL	(0)	5654	1446	474508
1331	24.0	9.0	2.8	chr10	72037541	72037904	(61759518)	C	LTR40a	LTR/ERVL	(1)	518	130	476407
2615	17.6	7.9	3.4	chr10	72037896	72038507	(61758915)	+	MER4A	LTR/ERV1	22	663	(1)	476408
1144	17.4	9.3	1.0	chr10	72092021	72092327	(61705095)	C	Charlie1b	DNA/hAT-Charlie	(1)	522	188	476510
1939	17.5	1.9	5.2	chr10	72092344	72092729	(61704693)	C	MLT1B	LTR/ERVL-MaLR	(9)	381	9	476511
1843	14.4	3.3	1.7	chr10	72249333	72249630	(61547792)	C	AluJo	SINE/Alu	(9)	303	1	476860
64	0.0	0.0	0.0	chr10	72249639	72249695	(61547727)	+	(TATT)n	Simple_repeat	1	57	(0)	476861
2285	10.2	0.0	0.0	chr10	72249696	72249979	(61547443)	C	AluSq	SINE/Alu	(28)	285	2	476862
1609	24.7	3.6	1.9	chr10	74484806	74485311	(59312111)	+	L1ME3G	LINE/L1	4903	5403	(743)	481265
1076	14.6	0.0	0.0	chr10	74485312	74485462	(59311960)	+	AluJr	SINE/Alu	133	283	(29)	481266
51	0.0	0.0	0.0	chr10	74485463	74485508	(59311914)	+	(AAAT)n	Simple_repeat	1	46	(0)	481267
349	26.7	6.2	0.0	chr10	74485519	74485638	(59311784)	+	L1M5	LINE/L1	5409	5536	(707)	481268
19	15.9	3.9	1.9	chr10	74825912	74825962	(58971460)	+	G-rich	Low_complexity	1	53	(0)	481942
14	18.2	0.0	0.0	chr10	74826033	74826063	(58971359)	+	(CGCG)n	Simple_repeat	1	31	(0)	481943
45	33.2	1.1	1.6	chr10	75384242	75384426	(58412996)	+	(CA)n	Simple_repeat	1	187	(0)	483016
18	16.1	1.9	5.5	chr10	75398685	75398738	(58398684)	+	(CCTCTC)n	Simple_repeat	1	55	(0)	483047
21	21.2	0.0	6.8	chr10	75398739	75398753	(58398669)	+	(TCCC)n	Simple_repeat	6	74	(0)	483048
119	26.4	0.8	3.4	chr10	77506487	77506571	(56290851)	+	GA-rich	Low_complexity	1	83	(0)	486048
30	0.0	0.0	0.0	chr10	77506572	77506597	(56290825)	+	(AG)n	Simple_repeat	1	26	(0)	486049
119	26.4	0.8	3.4	chr10	77506598	77506840	(56290582)	+	GA-rich	Low_complexity	84	320	(0)	486050
354	26.3	6.6	1.0	chr10	77605859	77605958	(56191464)	C	MIRc	SINE/MIR	(117)	151	46	486250
264	35.0	4.6	9.4	chr10	78583078	78583532	(55213890)	+	L2c	LINE/L2	2938	3369	(18)	488077
79	4.9	0.0	0.0	chr10	79114457	79114541	(54682881)	+	(GT)n	Simple_repeat	1	85	(0)	489081
14	11.2	3.5	0.0	chr10	79114544	79114578	(54682844)	+	(GGAG)n	Simple_repeat	1	36	(0)	489082
45776	6.8	0.7	0.2	chr10	83971634	83977263	(49820159)	C	HERVL-int	LTR/ERVL	(1)	5653	1	496105
41858	8.8	1.8	0.8	chr10	85030149	85035743	(48761679)	+	HERVL-int	LTR/ERVL	1	5654	(0)	497637
266	23.4	2.9	1.1	chr10	86116943	86117657	(47679765)	+	(ACCATC)n	Simple_repeat	1	736	(0)	499012
188	32.7	0.0	0.0	chr10	86231894	86231948	(47565474)	+	L2c	LINE/L2	3331	3385	(2)	499169
44	0.0	0.0	0.0	chr10	86796491	86796530	(47000892)	+	(ATTT)n	Simple_repeat	1	40	(0)	500169
1267	19.5	1.8	0.0	chr10	86796567	86796787	(47000635)	C	AluJb	SINE/Alu	(2)	310	86	500170
4279	22.0	9.4	4.7	chr10	87583267	87583970	(46213452)	+	L1MC5a	LINE/L1	116	820	(1957)	501496
3666	9.7	1.9	0.9	chr10	87583971	87584501	(46212921)	C	L1PA11	LINE/L1	(4)	6170	5635	501497
6271	12.9	9.1	0.9	chr10	87845092	87846218	(45951204)	C	Tigger3b	DNA/TcMar-Tigger	(1)	1230	2	501903
2359	9.0	0.3	0.3	chr10	88902570	88902868	(44894554)	C	AluY	SINE/Alu	(12)	299	1	503541
405	21.1	0.0	0.0	chr10	89861185	89861260	(43936162)	C	MER58C	DNA/hAT-Charlie	(22)	193	118	505079
135	16.6	0.8	1.2	chr10	89861261	89861512	(43935910)	+	(CTC)n	Simple_repeat	1	254	(0)	505080
530	19.5	3.0	6.6	chr10	89861516	89861652	(43935770)	C	MER58C	DNA/hAT-Charlie	(83)	132	1	505081
44021	7.7	0.5	0.1	chr10	90605417	90611050	(43186372)	C	HERVL-int	LTR/ERVL	(0)	5654	1	506062
18885	16.1	1.8	1.6	chr10	90655297	90658465	(43138957)	C	ERVL-int	LTR/ERVL	(12)	5745	2571	506133
6956	19.6	2.5	3.9	chr10	90658468	90660592	(43136830)	+	L1M3f	LINE/L1	1247	3345	(4220)	506134
22176	19.9	4.2	1.6	chr10	90698715	90704136	(43093286)	C	ERVL-B4-int	LTR/ERVL	(50)	5664	1	506185
55	3.7	0.0	0.0	chr10	91609148	91609203	(42188219)	+	(TC)n	Simple_repeat	1	56	(0)	507574
35	12.3	0.0	0.0	chr10	91609204	91609249	(42188173)	+	(AC)n	Simple_repeat	1	46	(0)	507575
415	32.7	9.3	2.4	chr10	92886563	92886731	(40910691)	+	MIRb	SINE/MIR	3	184	(84)	510081
45649	6.3	1.1	0.9	chr10	93229338	93234936	(40562486)	C	HERVL-int	LTR/ERVL	(0)	5654	38	510698
342	19.4	2.7	1.4	chr10	93352875	93352947	(40444475)	C	Chap1_Mam	DNA/hAT-Charlie	(174)	168	95	510949
474	13.9	0.0	0.0	chr10	93353019	93353090	(40444332)	C	MER75A	DNA/PiggyBac	(5)	72	1	510950
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
26711	10.2	2.1	0.4	chr10	94650940	94655169	(39142253)	+	HERVL-int	LTR/ERVL	5	4347	(1307)	513401
466	31.3	11.0	0.0	chr10	95730821	95731015	(38066407)	C	MIRc	SINE/MIR	(4)	264	46	514808
358	33.0	0.0	0.0	chr10	95779852	95779951	(38017471)	C	MIR	SINE/MIR	(37)	225	126	514889
437	28.9	3.8	0.7	chr10	97497898	97498050	(36299372)	+	MIRc	SINE/MIR	3	160	(108)	518102
967	19.8	1.5	5.2	chr10	100192367	100192579	(33604843)	C	Tigger10	DNA/TcMar-Tigger	(12)	1832	1628	522902
15	0.0	0.0	0.0	chr10	100228977	100228993	(33568429)	+	(GC)n	Simple_repeat	1	17	(0)	522978
38	0.0	0.0	0.0	chr10	100228994	100229026	(33568396)	+	(CA)n	Simple_repeat	1	33	(0)	522979
18	28.7	1.6	1.6	chr10	100229115	100229175	(33568247)	+	(CA)n	Simple_repeat	1	62	(0)	522980
19	4.0	0.0	0.0	chr10	101694598	101694623	(32102799)	+	(CCT)n	Simple_repeat	1	26	(0)	525477
13	13.6	2.1	8.2	chr10	101842829	101842876	(31954546)	+	(ACACAAC)n	Simple_repeat	1	49	(0)	525774
12	23.3	2.0	4.0	chr10	102133208	102133256	(31664166)	+	(GCGGCAG)n	Simple_repeat	1	50	(0)	526366
12	31.0	3.1	1.5	chr10	102504666	102504730	(31292692)	+	(GGCGA)n	Simple_repeat	1	67	(0)	527057
122	25.6	3.2	1.9	chr10	103836304	103836706	(29960716)	+	(AC)n	Simple_repeat	1	416	(0)	529740
1983	7.7	0.4	4.2	chr10	104302938	104303223	(29494199)	C	L1PA12	LINE/L1	(0)	6168	5894	530499
3509	13.5	3.9	0.2	chr10	104303226	104303796	(29493626)	+	MST-int	LTR/ERVL-MaLR	126	718	(933)	530500
44976	6.0	1.1	0.7	chr10	104462634	104468144	(29329278)	+	HERVL-int	LTR/ERVL	1	5537	(117)	530748
8300	6.2	0.8	0.0	chr10	111669961	111670989	(22126433)	C	HERVL-int	LTR/ERVL	(2427)	3227	2191	541445
428	27.3	14.7	0.0	chr10	112880748	112880875	(20916547)	+	MIRb	SINE/MIR	20	169	(99)	543383
211	31.1	10.5	0.8	chr10	112880915	112881034	(20916388)	C	L2b	LINE/L2	(6)	3369	3237	543384
47	0.0	2.3	0.0	chr10	113678604	113678647	(20118775)	+	(GT)n	Simple_repeat	1	45	(0)	544716
3359	26.6	8.9	5.1	chr10	115249999	115251477	(18545945)	C	ERV3-16A3_I-int	LTR/ERVL	(1779)	3447	1908	547261
20160	16.1	2.2	0.8	chr10	115272250	115275415	(18522007)	C	ERVL-B4-int	LTR/ERVL	(600)	5114	1894	547281
34	6.8	0.0	0.0	chr10	116273635	116273646	(17523776)	+	(CA)n	Simple_repeat	1	12	(0)	548528
52	2.1	0.0	0.0	chr10	116273647	116273695	(17523727)	+	(CT)n	Simple_repeat	1	49	(0)	548529
34	6.8	0.0	0.0	chr10	116273696	116273729	(17523693)	+	(CA)n	Simple_repeat	1	34	(0)	548530
231	28.8	2.7	0.0	chr10	117753325	117753397	(16044025)	C	MIRb	SINE/MIR	(97)	171	97	551020
59	1.8	0.0	0.0	chr10	117753431	117753485	(16043937)	+	(GT)n	Simple_repeat	1	55	(0)	551021
724	24.3	7.3	1.9	chr10	118106329	118106534	(15690888)	C	MIR	SINE/MIR	(34)	228	11	551565
241	37.8	5.9	1.4	chr10	118106973	118107117	(15690305)	+	LFSINE_Vert	SINE/tRNA	295	446	(13)	551566
4155	25.3	12.8	2.9	chr10	120195417	120197076	(13600346)	C	L1MA4A	LINE/L1	(5474)	1735	1	555274
262	30.8	5.5	0.0	chr10	120585569	120585672	(13211750)	C	MIRb	SINE/MIR	(59)	209	100	555886
414	32.6	1.8	2.9	chr10	121041184	121041462	(12755960)	C	L4_A_Mam	LINE/RTE-X	(8)	4982	4657	556545
330	30.1	10.9	2.1	chr10	121041916	121042149	(12755273)	C	MLT1H	LTR/ERVL-MaLR	(257)	292	36	556546
359	27.8	16.6	1.7	chr10	121362108	121362286	(12435136)	+	UCON26	Unknown	51	261	(82)	557038
234	38.5	8.5	6.3	chr10	123798194	123798540	(9998882)	C	L2c	LINE/L2	(0)	3387	3033	560919
29350	6.4	0.4	0.3	chr10	123816232	123819795	(9977627)	+	HERVL-int	LTR/ERVL	2087	5654	(0)	560943
334	25.6	2.0	0.5	chr10	123970962	123971876	(9825546)	+	(CA)n	Simple_repeat	1	933	(0)	561178
553	27.2	22.8	2.1	chr10	124571778	124572311	(9225111)	C	L2a	LINE/L2	(86)	3340	2684	562154
274	31.8	9.4	6.3	chr10	125487505	125487709	(8309713)	+	L1ME3G	LINE/L1	3521	3732	(2414)	563591
466	28.5	9.9	4.5	chr10	126132861	126133261	(7664161)	+	L2a	LINE/L2	196	620	(2799)	564472
692	29.1	14.2	1.3	chr10	126133471	126134111	(7663311)	+	L2a	LINE/L2	2680	3426	(0)	564472
31405	14.2	3.0	1.5	chr10	127951106	127952196	(5845226)	+	ERVL-B4-int	LTR/ERVL	1627	2729	(2985)	566845
4270	9.5	1.6	4.5	chr10	127952197	127952824	(5844598)	+	LTR71B	LTR/ERV1	1	610	(0)	566847
15	27.6	3.6	1.8	chr10	129057008	129057062	(4740360)	+	(TG)n	Simple_repeat	1	57	(0)	568098
5821	22.7	4.7	2.1	chr10	129980648	129981913	(3815509)	+	L1MD1	LINE/L1	312	1759	(5185)	568946
3957	33.2	6.5	4.3	chr10	132033252	132034188	(1763234)	+	ERVL-E-int	LTR/ERVL	1941	2928	(2739)	571249
2167	13.9	4.3	1.4	chr10	132034189	132034552	(1762870)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	571254
362	27.9	2.6	0.0	chr10	132210030	132210140	(1587282)	C	Tigger3a	DNA/TcMar-Tigger	(232)	116	3	571416
2001	10.2	3.3	0.0	chr10	132210283	132210547	(1586875)	C	AluSx1	SINE/Alu	(38)	274	1	571417
603	28.9	0.7	0.0	chr10	132336645	132336786	(1460636)	C	MIR	SINE/MIR	(117)	145	3	571550
12	31.0	0.0	0.0	chr10	132336795	132336839	(1460583)	+	A-rich	Low_complexity	1	45	(0)	571551
261	22.7	3.1	0.7	chr10	132392087	132392753	(1404669)	+	(GTGATG)n	Simple_repeat	1	688	(0)	571602
15	13.7	0.0	0.0	chr10	133319360	133319383	(478039)	+	(CA)n	Simple_repeat	1	24	(0)	572374
13	19.6	7.8	4.8	chr10	133319384	133319434	(477988)	+	(CTCACA)n	Simple_repeat	3	83	(0)	572375
20	18.9	2.4	0.0	chr10	133319472	133319513	(477909)	+	(CA)n	Simple_repeat	1	43	(0)	572376
766	24.7	5.8	2.0	chr10	133337151	133339630	(457792)	+	(CA)n	Simple_repeat	1	2583	(0)	572403
150	21.9	4.8	1.7	chr10	133349083	133349536	(447886)	+	(CA)n	Simple_repeat	1	476	(0)	572428
21810	6.5	0.9	1.3	chr10	133497879	133500000	(297422)	C	HERVL-int	LTR/ERVL	(1033)	4621	2508	572572
20595	6.6	0.1	0.2	chr10	133500001	133502509	(294913)	C	HERVL-int	LTR/ERVL	(3147)	2507	1	572574
1399	31.2	3.8	2.0	chr11	1361771	1362316	(133724306)	C	ERVL-E-int	LTR/ERVL	(2834)	2833	2278	574528
2303	12.1	0.3	0.0	chr11	1362328	1362633	(133723989)	+	AluSx	SINE/Alu	1	307	(5)	574531
2206	18.5	1.6	0.0	chr11	1377063	1377445	(133709177)	+	MLT1B	LTR/ERVL-MaLR	2	390	(0)	574552
458	28.7	16.4	1.9	chr11	1377447	1377775	(133708847)	C	L2a	LINE/L2	(290)	3136	2749	574553
495	30.9	4.0	1.8	chr11	2247345	2247565	(132839057)	+	HERV16-int	LTR/ERVL	2117	2342	(2884)	575579
1098	31.1	2.5	1.4	chr11	2247590	2247951	(132838671)	+	HERV16-int	LTR/ERVL	2492	2857	(2139)	575579
386	33.8	0.5	0.7	chr11	2428421	2429753	(132656869)	+	(GTG)n	Simple_repeat	1	1339	(0)	575789
4875	25.7	8.7	8.8	chr11	2763862	2765923	(132320699)	C	L1MEg	LINE/L1	(1820)	4326	2140	576124
411	25.0	0.5	1.5	chr11	3173816	3174833	(131911789)	+	(CAT)n	Simple_repeat	1	1023	(0)	576670
17996	16.5	5.9	3.6	chr11	4142827	4144989	(130941633)	+	ERVL-B4-int	LTR/ERVL	1573	3724	(1990)	578438
1105	24.3	2.4	9.6	chr11	7689033	7689387	(127397235)	+	MLT2C1	LTR/ERVL	1	329	(68)	582959
2616	16.7	2.6	2.6	chr11	7689391	7689857	(127396765)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	582960
452	30.7	6.9	4.0	chr11	12131912	12132133	(122954489)	C	MIRb	SINE/MIR	(16)	246	21	590297
1060	21.3	1.7	1.7	chr11	14650760	14650998	(120435624)	+	MLT1D	LTR/ERVL-MaLR	251	489	(16)	594305
2179	15.4	8.5	5.2	chr11	14650999	14651443	(120435179)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	5	594307
454	26.3	12.0	1.2	chr11	26903685	26903867	(108182755)	+	MIRb	SINE/MIR	3	212	(56)	613118
712	24.0	6.7	1.5	chr11	34157908	34158106	(100928516)	+	MIR	SINE/MIR	47	256	(6)	624751
6688	8.7	2.1	1.3	chr11	34851603	34852935	(100233687)	+	L1PA13	LINE/L1	4821	6163	(0)	625925
440	26.3	14.6	3.4	chr11	36047637	36047872	(99038750)	+	MIR	SINE/MIR	2	268	(0)	627764
228	21.7	21.6	0.0	chr11	36047889	36047957	(99038665)	+	MIR3	SINE/MIR	60	147	(61)	627765
26866	8.9	0.7	0.6	chr11	38627834	38631429	(96455193)	+	HERVL-int	LTR/ERVL	2	3599	(2055)	631433
1078	11.5	2.7	16.5	chr11	43316630	43316847	(91769775)	C	AluJo	SINE/Alu	(19)	293	107	638283
2661	24.5	7.5	0.7	chr11	43874869	43875603	(91211019)	C	ERVL-E-int	LTR/ERVL	(842)	4825	4037	639127
654	30.7	5.4	0.4	chr11	43875633	43875861	(91210761)	C	ERVL-E-int	LTR/ERVL	(2917)	2750	2510	639127
1345	9.3	0.0	0.0	chr11	43875862	43876023	(91210599)	C	AluSx3	SINE/Alu	(17)	294	133	639128
2455	8.5	0.0	0.7	chr11	43876024	43876328	(91210294)	C	AluYm1	SINE/Alu	(8)	303	1	639129
979	27.6	1.1	0.7	chr11	44493267	44493536	(90593086)	+	ERV3-16A3_I-int	LTR/ERVL	1589	1859	(3137)	640226
2214	25.4	4.3	4.4	chr11	44493524	44494352	(90592270)	+	ERV3-16A3_I-int	LTR/ERVL	2418	3330	(2337)	640226
43992	6.5	0.3	0.5	chr11	44544590	44550255	(90536367)	+	HERVL-int	LTR/ERVL	1	5654	(0)	640336
633	29.8	15.3	0.0	chr11	44717820	44718034	(90368588)	+	MIR	SINE/MIR	2	255	(7)	640690
1658	19.6	9.2	3.4	chr11	44718223	44718661	(90367961)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	640691
148	30.9	0.2	0.2	chr11	44978231	44978679	(90107943)	+	(GT)n	Simple_repeat	1	450	(0)	641238
317	31.4	6.0	2.8	chr11	46945922	46946065	(88140557)	+	LTR67B	LTR/ERVL	409	557	(63)	644966
332	26.7	1.3	0.0	chr11	58004932	58005006	(77081616)	C	MIRb	SINE/MIR	(27)	241	166	654841
38579	7.3	0.9	0.5	chr11	59276281	59279131	(75807491)	+	HERVL-int	LTR/ERVL	1	2861	(2793)	656588
12	19.3	4.9	6.2	chr11	61913490	61913550	(73173072)	+	(CAGGC)n	Simple_repeat	1	64	(0)	661059
188	24.4	0.0	4.7	chr11	61913708	61913718	(73172904)	C	MIR	SINE/MIR	(3)	259	219	661060
189	18.8	0.0	0.0	chr11	61913719	61913750	(73172872)	C	L2a	LINE/L2	(18)	3408	3377	661061
2175	14.7	0.0	0.3	chr11	66483014	66483326	(68603296)	C	AluSz6	SINE/Alu	(0)	312	1	669615
772	29.4	10.7	5.5	chr11	66483327	66483795	(68602827)	C	L1ME3G	LINE/L1	(172)	752	252	669614
35	24.7	2.6	5.1	chr11	66744738	66744793	(68341829)	+	(GGCGCG)n	Simple_repeat	65	156	(0)	670144
28	0.0	0.0	0.0	chr11	66744820	66744845	(68341777)	+	(GGC)n	Simple_repeat	1	26	(0)	670146
200	33.5	14.1	2.3	chr11	67103734	67103907	(67982715)	+	L2b	LINE/L2	2326	2523	(896)	670963
703	22.8	1.2	3.4	chr11	69172736	69172912	(65913710)	C	LTR33A	LTR/ERVL	(299)	221	49	674637
481	26.5	7.8	6.5	chr11	69172932	69173145	(65913477)	+	L2a	LINE/L2	3080	3296	(130)	674638
2312	32.5	3.1	2.5	chr11	70524189	70525264	(64561358)	+	ERVL-E-int	LTR/ERVL	2175	3257	(2410)	676959
201	34.2	2.5	2.5	chr11	70892583	70892663	(64193959)	+	MIRb	SINE/MIR	37	117	(151)	677516
526	27.9	2.8	1.4	chr11	70892845	70893055	(64193567)	+	LTR16C	LTR/ERVL	265	478	(11)	677517
1821	17.7	3.2	1.0	chr11	71304605	71304904	(63781718)	+	AluJr	SINE/Alu	3	309	(3)	678032
451	21.7	8.5	2.3	chr11	71483097	71483228	(63603394)	C	L1MB5	LINE/L1	(278)	5896	5756	678331
51	2.1	0.0	0.0	chr11	71574251	71574298	(63512324)	+	(AC)n	Simple_repeat	1	48	(0)	678460
1243	32.8	3.8	1.1	chr11	71574368	71574933	(63511689)	+	ERVL-E-int	LTR/ERVL	2275	2929	(2725)	678459
70	0.0	0.0	0.0	chr11	73142812	73142871	(61943751)	+	(GT)n	Simple_repeat	1	60	(0)	681263
1564	16.9	5.5	5.8	chr11	73161900	73162212	(61924410)	+	AluJo	SINE/Alu	1	312	(0)	681304
241	16.9	4.0	11.2	chr11	73162572	73162651	(61923971)	+	MamGypLTR3a	LTR/Gypsy	61	134	(847)	681305
12083	14.1	1.7	2.8	chr11	73618930	73620962	(61465660)	+	ERVL-B4-int	LTR/ERVL	1513	3523	(2191)	682254
3323	28.1	7.7	8.0	chr11	74912919	74913973	(60172649)	+	ERVL-E-int	LTR/ERVL	1860	2908	(2759)	684983
4520	31.6	6.5	3.5	chr11	75578934	75580506	(59506116)	+	ERVL-E-int	LTR/ERVL	1616	3324	(2330)	686382
1939	27.1	6.4	5.2	chr11	75688715	75689841	(59396781)	C	L1ME3Cz	LINE/L1	(134)	863	1	686570
253	30.6	11.7	7.0	chr11	75689855	75690139	(59396483)	+	MLT1L	LTR/ERVL-MaLR	42	396	(214)	686571
1276	21.1	8.7	1.6	chr11	77033799	77034107	(58052515)	+	HERVL74-int	LTR/ERVL	1708	2040	(3645)	689129
366	37.7	14.7	5.0	chr11	77985116	77985732	(57100890)	+	L2b	LINE/L2	2671	3375	(0)	691032
213	28.1	5.3	4.3	chr11	77985771	77985863	(57100759)	+	L2c	LINE/L2	3262	3355	(32)	691033
20728	14.6	2.1	3.4	chr11	78608127	78609175	(56477447)	+	ERVL-B4-int	LTR/ERVL	1626	2653	(3061)	692351
2330	9.1	1.3	0.3	chr11	78609176	78609472	(56477150)	C	AluSx1	SINE/Alu	(12)	300	1	692353
45750	7.0	0.6	0.1	chr11	78618928	78624549	(56462073)	+	HERVL-int	LTR/ERVL	1	5654	(0)	692370
19129	14.3	0.4	0.6	chr11	85940994	85943742	(49142880)	+	HERVL18-int	LTR/ERVL	838	3580	(2467)	704661
449	32.7	3.2	5.0	chr11	91935312	91935533	(43151089)	+	ERVL-E-int	LTR/ERVL	2431	2648	(3006)	713453
19399	14.2	4.0	1.3	chr11	93606388	93609488	(41477134)	C	ERVL-B4-int	LTR/ERVL	(7)	5707	2520	715853
37	0.0	0.0	0.0	chr11	93625890	93625921	(41460701)	+	(GT)n	Simple_repeat	1	32	(0)	715882
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
3266	15.6	0.9	1.6	chr11	95518029	95518600	(39568022)	C	MER6A	DNA/TcMar-Tigger	(0)	605	38	718750
271	28.0	5.2	3.7	chr11	107321602	107321750	(27764872)	C	L1M1	LINE/L1	(5991)	1505	1216	734730
29070	7.0	0.8	0.3	chr11	109496323	109500000	(25586622)	C	HERVL-int	LTR/ERVL	(0)	5654	1960	738420
35871	9.1	1.6	0.5	chr11	109962087	109967674	(25118948)	+	HERVL-int	LTR/ERVL	1	5654	(0)	739049
6349	10.9	1.5	0.5	chr11	110191871	110193544	(24893078)	+	L1PA16	LINE/L1	5335	7026	(0)	739396
2359	16.2	0.2	5.3	chr11	112389645	112390055	(22696567)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	743067
2573	15.8	13.3	1.2	chr11	112594470	112594957	(22491665)	+	MLT2B4	LTR/ERVL	1	556	(0)	743371
1881	10.7	1.1	0.7	chr11	113181424	113181697	(21904925)	+	L1PA11	LINE/L1	5899	6173	(1)	744201
250	30.6	4.0	1.4	chr11	113421671	113421816	(21664806)	+	MamTip3	DNA/hAT-Tip100	70	219	(281)	744509
516	31.2	12.8	10.7	chr11	114123249	114123286	(20963336)	C	MLT1O	LTR/ERVL-MaLR	(438)	104	65	745777
786	18.6	2.0	1.9	chr11	115690837	115691015	(19395607)	+	FLAM_C	SINE/Alu	1	133	(0)	748089
3349	16.1	1.7	4.1	chr11	115691258	115691911	(19394711)	+	L1MA9	LINE/L1	5675	6312	(0)	748090
1799	33.5	9.1	4.2	chr11	116296650	116297461	(18789161)	+	ERVL-E-int	LTR/ERVL	1811	2669	(2998)	749048
2235	19.5	12.0	4.0	chr11	116297499	116297770	(18788852)	C	Charlie10	DNA/hAT-Charlie	(46)	2776	2520	749050
678	31.2	6.2	7.0	chr11	116541515	116541858	(18544764)	C	L2c	LINE/L2	(0)	3387	3047	749521
1457	14.7	3.2	0.0	chr11	118237505	118237715	(16848907)	+	MER20	DNA/hAT-Charlie	2	219	(0)	752541
514	31.7	2.1	4.5	chr11	118237722	118237854	(16848768)	C	MIRc	SINE/MIR	(6)	262	127	752542
71	20.8	0.0	0.7	chr11	120347119	120347265	(14739357)	+	(CTTT)n	Simple_repeat	1	147	(0)	756404
43	0.0	0.0	0.0	chr11	120347271	120347307	(14739315)	+	(TG)n	Simple_repeat	1	37	(0)	756405
329	22.9	1.9	10.3	chr11	123549568	123549684	(11536938)	C	MIR3	SINE/MIR	(21)	187	81	761773
194	23.5	7.3	0.0	chr11	124671108	124671158	(10415464)	C	L2b	LINE/L2	(5)	3370	3316	763390
28720	7.5	1.4	0.0	chr11	124905727	124909317	(10177305)	C	HERVL-int	LTR/ERVL	(0)	5654	2014	763743
43196	7.1	1.9	0.4	chr11	125029295	125034862	(10051760)	C	HERVL-int	LTR/ERVL	(0)	5654	1	763898
543	30.6	5.7	3.6	chr11	128363955	128364178	(6722444)	+	LTR88b	LTR/Gypsy?	29	257	(580)	768816
4403	33.1	8.0	6.3	chr11	129630494	129631486	(5455136)	C	ERVL-E-int	LTR/ERVL	(2145)	3522	2491	770590
281	11.9	18.1	0.0	chr11	129631487	129631545	(5455077)	+	L1MB4	LINE/L1	6084	6155	(25)	770593
4403	33.1	8.0	6.3	chr11	129631546	129632500	(5454122)	C	ERVL-E-int	LTR/ERVL	(2145)	2490	1497	770590
666	34.9	7.8	2.1	chr11	134638287	134638719	(447903)	+	ERVL-E-int	LTR/ERVL	2431	2890	(2777)	777481
224	23.2	1.6	0.9	chr12	1604758	1605303	(131670006)	+	(GT)n	Simple_repeat	1	555	(0)	780942
31	0.0	0.0	0.0	chr12	1924796	1924829	(131350480)	+	(GT)n	Simple_repeat	1	34	(0)	781437
50	2.2	0.0	0.0	chr12	1924830	1924876	(131350433)	+	(GA)n	Simple_repeat	1	47	(0)	781438
166	28.6	0.2	0.2	chr12	5796126	5796581	(127478728)	+	(CA)n	Simple_repeat	1	457	(0)	787541
33	0.0	0.0	0.0	chr12	6617995	6618022	(126657287)	+	(AC)n	Simple_repeat	1	28	(0)	789037
17	0.0	0.0	0.0	chr12	6618023	6618041	(126657268)	+	(CT)n	Simple_repeat	1	19	(0)	789038
24	12.0	0.0	0.0	chr12	6618041	6618076	(126657233)	+	(CA)n	Simple_repeat	1	36	(0)	789039
192	29.1	0.4	0.6	chr12	6817645	6818185	(126457124)	+	(CA)n	Simple_repeat	1	543	(0)	789468
1024	14.5	1.6	0.6	chr12	10687942	10688121	(122587188)	+	THE1C-int	LTR/ERVL-MaLR	1	182	(1449)	795541
485	7.1	1.4	0.0	chr12	10688126	10688195	(122587114)	+	THE1C	LTR/ERVL-MaLR	311	381	(0)	795541
13896	16.5	1.9	1.2	chr12	10688198	10690704	(122584605)	C	ERVL-B4-int	LTR/ERVL	(3082)	2632	108	795538
8357	16.3	9.2	5.8	chr12	12226777	12227399	(121047910)	+	L1MCa	LINE/L1	1201	1824	(4684)	797723
2479	11.0	0.0	0.3	chr12	12227400	12227708	(121047601)	C	AluSq2	SINE/Alu	(5)	308	1	797726
13	10.8	3.1	3.0	chr12	12357357	12357388	(120917921)	+	(TCCCTG)n	Simple_repeat	1	33	(0)	798018
1522	27.2	3.4	1.2	chr12	14224922	14225344	(119049965)	+	ERVL-E-int	LTR/ERVL	2088	2608	(3059)	800991
483	27.7	3.3	0.0	chr12	14225354	14225501	(119049808)	+	MER58B	DNA/hAT-Charlie	12	164	(177)	800992
39386	7.6	0.8	1.0	chr12	14333071	14335364	(118939945)	+	HERVL-int	LTR/ERVL	1006	3283	(2371)	801211
23578	10.8	1.2	0.3	chr12	14484425	14488149	(118787160)	C	HERVL-int	LTR/ERVL	(1798)	3856	1	801436
41345	9.3	1.4	0.6	chr12	25307697	25313307	(107962002)	+	HERVL-int	LTR/ERVL	1	5654	(0)	816294
1018	31.4	4.9	3.4	chr12	25846342	25846924	(107428385)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	4	817083
37279	7.3	0.7	0.2	chr12	26776000	26781630	(106493679)	+	HERVL-int	LTR/ERVL	1	5654	(0)	818454
524	29.1	13.8	3.9	chr12	32282563	32282970	(100992339)	C	L2a	LINE/L2	(1068)	2351	1897	827193
226	17.7	3.6	0.2	chr12	34236015	34236486	(99038823)	+	(ATCACC)n	Simple_repeat	1	489	(0)	829972
20998	8.4	0.4	0.3	chr12	38423264	38426005	(94849304)	C	HERVL-int	LTR/ERVL	(767)	4887	2144	831084
316	19.4	1.5	0.0	chr12	43252459	43252525	(90022784)	+	MER58D	DNA/hAT-Charlie	293	360	(26)	837819
2272	7.5	0.0	2.5	chr12	43252973	43253284	(90022025)	C	AluY	SINE/Alu	(0)	311	9	837820
22188	7.5	0.6	0.5	chr12	46249180	46252485	(87022824)	+	L1PA6	LINE/L1	2834	6139	(15)	842023
30041	8.2	1.6	0.6	chr12	46727631	46731599	(86543710)	C	HERVL-int	LTR/ERVL	(0)	5654	1645	842655
460	22.3	3.7	5.1	chr12	47706810	47706868	(85568441)	C	MER5B	DNA/hAT-Charlie	(0)	178	126	844075
69	3.0	0.0	0.0	chr12	47706869	47706936	(85568373)	+	(GT)n	Simple_repeat	1	68	(0)	844076
460	22.3	3.7	5.1	chr12	47706937	47707013	(85568296)	C	MER5B	DNA/hAT-Charlie	(53)	125	44	844075
11934	29.9	5.1	3.0	chr12	48377147	48378694	(84896615)	+	ERVL-E-int	LTR/ERVL	1854	3475	(2192)	845130
2403	5.2	1.0	2.6	chr12	48717145	48717452	(84557857)	+	AluSx3	SINE/Alu	1	303	(8)	845624
1563	27.9	5.8	4.7	chr12	49279706	49280048	(83995261)	+	MLT1L	LTR/ERVL-MaLR	5	354	(256)	846857
368	29.6	11.6	2.2	chr12	49985364	49985543	(83289766)	+	MIRc	SINE/MIR	51	249	(19)	848187
2857	20.9	6.8	0.8	chr12	50963860	50964480	(82310829)	C	ERVL-E-int	LTR/ERVL	(0)	5667	5007	850326
6108	22.1	5.8	3.4	chr12	50964505	50964903	(82310406)	C	ERVL-E-int	LTR/ERVL	(3001)	2666	2267	850326
782	16.8	4.0	0.0	chr12	50964904	50965022	(82310287)	C	AluJr	SINE/Alu	(188)	124	1	850328
320	33.5	14.5	2.5	chr12	52205509	52205707	(81069602)	C	MIRb	SINE/MIR	(0)	268	42	852624
1747	18.0	2.9	2.6	chr12	52876862	52877172	(80398137)	C	AluJr	SINE/Alu	(0)	312	1	853562
36	2.9	0.0	0.0	chr12	52877320	52877354	(80397955)	+	(AC)n	Simple_repeat	1	35	(0)	853563
1918	16.4	0.3	0.3	chr12	53642886	53643190	(79632119)	+	AluJo	SINE/Alu	1	305	(7)	855156
772	24.5	4.8	0.2	chr12	53643191	53643394	(79631915)	C	LTR8B	LTR/ERV1	(35)	785	576	855155
1076	15.2	3.5	0.0	chr12	53643397	53643561	(79631748)	+	ERVL-B4-int	LTR/ERVL	2556	2726	(2988)	855157
647	14.6	0.0	0.0	chr12	53643566	53643661	(79631648)	C	AluJr4	SINE/Alu	(17)	295	200	855158
2113	29.5	7.0	3.7	chr12	53643663	53643886	(79631423)	+	ERVL-B4-int	LTR/ERVL	2825	3088	(2138)	855157
27	0.0	0.0	3.3	chr12	53841520	53841549	(79433760)	+	(AAT)n	Simple_repeat	1	30	(0)	855541
200	27.1	3.3	0.0	chr12	53841562	53841620	(79433689)	C	L3b	LINE/CR1	(91)	5141	5081	855542
194	15.9	14.9	4.5	chr12	54152672	54152737	(79122572)	C	L2	LINE/L2	(2933)	486	413	855947
78	0.0	0.0	0.0	chr12	54152764	54152829	(79122480)	+	(TG)n	Simple_repeat	1	66	(0)	855948
1476	20.9	9.2	1.4	chr12	54177894	54178252	(79097057)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	855992
126	18.6	1.2	0.0	chr12	54211966	54212209	(79063100)	+	(AC)n	Simple_repeat	1	247	(0)	856057
25	24.2	1.2	3.6	chr12	54549560	54549642	(78725667)	+	(CGG)n	Simple_repeat	1	84	(0)	856639
229	30.9	1.8	0.0	chr12	55972930	55972984	(77302325)	C	MIRc	SINE/MIR	(95)	173	118	858639
37	7.3	5.2	2.5	chr12	55973046	55973122	(77302187)	+	(CA)n	Simple_repeat	1	81	(0)	858640
30	26.7	4.2	0.0	chr12	55973123	55973210	(77302099)	+	(AC)n	Simple_repeat	1	92	(0)	858641
28923	11.3	2.1	1.6	chr12	56401326	56404751	(76870558)	+	HERVL-int	LTR/ERVL	1973	5654	(0)	859469
6329	9.2	2.2	0.6	chr12	56841595	56842568	(76432741)	C	L1PA13	LINE/L1	(0)	6163	5175	860355
37	0.0	0.0	0.0	chr12	57112147	57112178	(76163131)	+	(AC)n	Simple_repeat	1	32	(0)	860716
50	0.0	4.0	0.0	chr12	57112214	57112263	(76163046)	+	(CA)n	Simple_repeat	1	52	(0)	860717
254	12.0	7.0	2.0	chr12	57191563	57192130	(76083179)	+	(AC)n	Simple_repeat	1	608	(0)	860841
2401	7.2	0.0	0.0	chr12	57458111	57458400	(75816909)	C	AluSx	SINE/Alu	(17)	295	6	861364
467	19.0	7.6	0.8	chr12	57458401	57458454	(75816855)	+	Charlie1a	DNA/hAT-Charlie	1394	1455	(0)	861363
871	16.2	7.8	0.0	chr12	57458515	57458668	(75816641)	+	FAM	SINE/Alu	18	184	(1)	861365
515	37.2	11.4	0.8	chr12	57802523	57802912	(75472397)	+	L2	LINE/L2	2303	2739	(680)	861857
21048	16.8	4.1	4.4	chr12	58151251	58152949	(75122360)	C	ERVL-int	LTR/ERVL	(1542)	4215	2463	862375
182	19.5	6.1	14.4	chr12	58152950	58153039	(75122270)	C	OldhAT1	DNA/hAT-Ac	(1174)	1674	1593	862376
21048	16.8	4.1	4.4	chr12	58153040	58154376	(75120933)	C	ERVL-int	LTR/ERVL	(1542)	2462	1081	862375
21975	12.0	1.6	1.5	chr12	63330328	63336719	(69938590)	+	L1PA8A	LINE/L1	8	6418	(28)	869276
3170	8.3	1.0	14.5	chr12	63419099	63419690	(69855619)	+	LTR10F	LTR/ERV1	1	511	(0)	869382
1436	26.0	2.4	0.2	chr12	63919816	63920262	(69355047)	C	L1ME3F	LINE/L1	(398)	5845	5389	870198
44845	6.1	1.9	1.2	chr12	64132184	64134139	(69141170)	C	HERVL-int	LTR/ERVL	(2371)	3283	1371	870542
67	0.0	1.6	0.0	chr12	65824709	65824769	(67450540)	+	(TC)n	Simple_repeat	1	62	(0)	873413
292	25.3	3.1	1.0	chr12	68489395	68489490	(64785819)	+	L1ME3A	LINE/L1	6048	6145	(97)	877466
15	9.7	0.0	0.0	chr12	68489564	68489585	(64785724)	+	(GA)n	Simple_repeat	1	22	(0)	877471
252	22.8	0.0	0.0	chr12	68489750	68489806	(64785503)	C	L1M4	LINE/L1	(1548)	4598	4542	877472
42504	8.0	1.0	1.0	chr12	73827640	73832153	(59443156)	+	HERVL-int	LTR/ERVL	1126	5654	(0)	885450
21144	8.6	0.1	0.1	chr12	75012805	75015538	(58259771)	+	HERVL-int	LTR/ERVL	1	2736	(2918)	886976
36279	10.8	1.5	0.5	chr12	75372313	75377281	(57898028)	C	HERVL-int	LTR/ERVL	(620)	5034	1	887450
20140	7.3	1.8	0.3	chr12	79490830	79493547	(53781762)	C	HERVL-int	LTR/ERVL	(570)	5084	2324	893564
18713	12.1	0.7	0.1	chr12	82205289	82207989	(51067320)	C	HERVL-int	LTR/ERVL	(2937)	2717	1	897442
23430	14.9	1.3	1.4	chr12	84402181	84407746	(48867563)	+	HERVL-int	LTR/ERVL	4	5654	(0)	900229
31074	10.3	1.3	0.2	chr12	86561796	86566138	(46709171)	+	HERVL-int	LTR/ERVL	1	4391	(1263)	903118
443	29.6	4.4	1.9	chr12	94808330	94808484	(38466825)	C	L2b	LINE/L2	(12)	3363	3205	915875
1085	26.7	6.7	4.3	chr12	94808496	94808576	(38466733)	+	L2a	LINE/L2	3025	3100	(326)	915876
2595	17.5	7.1	0.0	chr12	94808577	94809010	(38466299)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	915877
794	28.1	10.3	4.4	chr12	95621596	95621978	(37653331)	+	LTR104_Mam	LTR/Gypsy	485	892	(617)	917603
300	17.4	4.3	1.4	chr12	95836931	95837621	(37437688)	+	GA-rich	Low_complexity	1	721	(0)	917975
756	17.7	0.0	2.3	chr12	96144390	96144519	(37130790)	C	AluJr	SINE/Alu	(57)	255	129	918545
496	31.1	20.0	4.4	chr12	100110494	100110786	(33164523)	C	L2b	LINE/L2	(7)	3368	3019	924887
924	30.7	9.4	5.7	chr12	102006658	102007258	(31268051)	+	ERVL-E-int	LTR/ERVL	1769	2394	(2832)	928429
2272	10.3	1.3	0.7	chr12	102007371	102007680	(31267629)	C	AluSz	SINE/Alu	(0)	312	1	928430
42747	7.8	0.9	0.6	chr12	103062927	103068480	(30206829)	+	HERVL-int	LTR/ERVL	79	5654	(0)	930069
1891	19.1	15.4	5.4	chr12	103948475	103948954	(29326355)	+	L1MD3	LINE/L1	7303	7845	(150)	931585
769	21.0	2.4	0.0	chr12	104585483	104585644	(28689665)	C	MIR	SINE/MIR	(15)	247	82	932880
1594	20.4	11.0	2.4	chr12	104585660	104586080	(28689229)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	932881
34297	6.6	0.5	0.1	chr12	105605213	105609397	(27665912)	C	HERVL-int	LTR/ERVL	(1451)	4203	2	934690
356	29.0	0.8	5.1	chr12	106027504	106027641	(27247668)	C	MIRc	SINE/MIR	(49)	219	88	935464
353	34.8	0.0	1.7	chr12	107478354	107478470	(25796839)	+	L2b	LINE/L2	3256	3370	(5)	938242
12	16.9	2.9	2.8	chr12	107478509	107478543	(25796766)	+	(AATT)n	Simple_repeat	1	36	(0)	938243
340	21.9	0.7	0.4	chr12	107528773	107529497	(25745812)	+	(TGATGA)n	Simple_repeat	1	730	(0)	938356
586	19.8	0.0	0.0	chr12	109252617	109252722	(24022587)	+	MER5A	DNA/hAT-Charlie	8	113	(76)	942123
591	26.2	2.9	1.8	chr12	109252773	109252943	(24022366)	C	MER5B	DNA/hAT-Charlie	(5)	173	1	942124
86	7.4	3.8	3.6	chr12	109393530	109393715	(23881594)	+	(TCCA)n	Simple_repeat	1	193	(0)	942433
1098	19.8	0.3	0.0	chr12	109634192	109636271	(23639038)	+	(CAC)n	Simple_repeat	1	2086	(0)	942926
33	0.0	0.0	0.0	chr12	110666423	110666453	(22608856)	+	(AAAAG)n	Simple_repeat	1	31	(0)	945242
963	29.0	12.7	8.2	chr12	110666454	110666580	(22608729)	+	L1MEc	LINE/L1	1131	1262	(5138)	945238
519	33.0	10.1	3.9	chr12	110666606	110667012	(22608297)	+	L2c	LINE/L2	2947	3381	(6)	945234
2363	11.9	0.0	0.0	chr12	110835219	110835529	(22439780)	C	AluSx1	SINE/Alu	(0)	312	2	945679
286	24.0	7.8	13.4	chr12	110835530	110835617	(22439692)	C	MLT1J	LTR/ERVL-MaLR	(414)	98	19	945677
918	11.8	3.8	0.0	chr12	110835952	110836078	(22439231)	+	AluJb	SINE/Alu	179	310	(2)	945680
22723	13.7	3.5	2.2	chr12	111128085	111131055	(22144254)	C	ERVL-B4-int	LTR/ERVL	(1783)	3931	898	946353
916	31.4	8.5	11.7	chr12	111304479	111305246	(21970063)	C	MamGypLTR3a	LTR/Gypsy	(2)	979	239	946756
1608	16.5	12.7	2.0	chr12	113744628	113744979	(19530330)	C	MSTD	LTR/ERVL-MaLR	(1)	395	1	952390
32	35.4	2.2	3.2	chr12	115085494	115085677	(18189632)	+	(AT)n	Simple_repeat	1	188	(0)	955241
66	32.3	3.2	3.8	chr12	115085678	115085758	(18189551)	+	(ACATAT)n	Simple_repeat	29	277	(198)	955239
20	31.7	5.0	0.0	chr12	115085759	115085838	(18189471)	+	(AT)n	Simple_repeat	1	84	(0)	955242
66	32.3	3.2	3.8	chr12	115085839	115085898	(18189411)	+	(ACATAT)n	Simple_repeat	278	475	(0)	955239
656	30.1	8.1	0.5	chr12	115085945	115086161	(18189148)	C	MIRb	SINE/MIR	(8)	260	26	955243
22	24.5	4.6	3.3	chr12	115851942	115852028	(17423281)	+	(AT)n	Simple_repeat	1	91	(0)	956921
14	22.8	0.0	4.4	chr12	115870916	115870960	(17404349)	+	(TAA)n	Simple_repeat	1	45	(0)	956961
505	28.4	1.7	0.7	chr12	115870963	115871137	(17404172)	C	MIRb	SINE/MIR	(0)	262	71	956962
2009	15.8	0.7	0.0	chr12	115871138	115871434	(17403875)	+	AluSx1	SINE/Alu	1	299	(13)	956963
501	24.8	2.8	2.8	chr12	115920806	115920946	(17354363)	C	MIRc	SINE/MIR	(117)	151	11	957091
1713	30.0	6.3	0.9	chr12	115920970	115921507	(17353802)	+	ERVL-int	LTR/ERVL	2619	3187	(2570)	957092
172	15.9	4.9	4.2	chr12	116737305	116737777	(16537532)	+	GA-rich	Low_complexity	1	496	(0)	958800
447	20.4	21.0	0.0	chr12	116916738	116916884	(16358425)	C	MLT1H	LTR/ERVL-MaLR	(29)	520	335	959286
23	3.7	0.0	0.0	chr12	116916885	116916912	(16358397)	+	(TG)n	Simple_repeat	1	28	(0)	959287
17	5.0	0.0	0.0	chr12	116916912	116916932	(16358377)	+	(GA)n	Simple_repeat	1	21	(0)	959288
405	25.0	14.0	5.3	chr12	116917011	116917179	(16358130)	C	MLT1H	LTR/ERVL-MaLR	(303)	186	1	959286
15	14.4	0.0	0.0	chr12	117577355	117577378	(15697931)	+	(GA)n	Simple_repeat	1	24	(0)	960646
705	27.9	1.0	1.9	chr12	117577426	117577503	(15697806)	C	MIR	SINE/MIR	(32)	230	155	960647
2003	17.1	3.3	3.0	chr12	117577504	117577866	(15697443)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	960648
45626	5.7	0.5	1.2	chr12	117652319	117656327	(15618982)	+	HERVL-int	LTR/ERVL	1570	5554	(100)	960796
350	34.6	8.4	8.0	chr12	117702021	117702434	(15572875)	+	L2b	LINE/L2	2955	3370	(5)	960888
1931	13.1	0.0	0.0	chr12	118580689	118580947	(14694362)	+	AluSz6	SINE/Alu	36	294	(18)	962880
2394	13.3	1.3	5.0	chr12	118580948	118581016	(14694293)	+	MLT1B	LTR/ERVL-MaLR	332	390	(0)	962879
532	30.2	4.7	6.0	chr12	118581017	118581170	(14694139)	C	MLT1K	LTR/ERVL-MaLR	(436)	159	5	962878
1710	15.2	0.7	1.1	chr12	119883671	119883940	(13391369)	+	AluJr	SINE/Alu	29	297	(15)	965701
94	18.0	1.5	2.4	chr12	119883943	119884147	(13391162)	+	GA-rich	Low_complexity	1	208	(0)	965702
4280	13.3	3.5	1.7	chr12	119884148	119884693	(13390616)	C	L1MC1	LINE/L1	(168)	6165	5600	965700
272	20.4	2.2	3.4	chr12	120389577	120389939	(12885370)	+	GA-rich	Low_complexity	1	359	(0)	966907
1954	9.9	0.0	0.0	chr12	120389940	120390181	(12885128)	+	AluSx1	SINE/Alu	2	243	(69)	966908
33013	8.2	0.7	0.6	chr12	120608349	120613810	(12661499)	+	HERVL-int	LTR/ERVL	189	5654	(0)	967506
2090	11.6	0.7	0.3	chr12	120727937	120728246	(12547063)	C	AluSx	SINE/Alu	(1)	311	1	967752
1005	15.9	6.1	1.2	chr12	122092897	122095314	(11179995)	+	(GT)n	Simple_repeat	1	2566	(0)	971084
325	25.7	9.3	3.5	chr12	122437075	122437215	(10838094)	+	LTR81B	LTR/Gypsy	176	325	(1068)	971819
265	3.1	3.0	0.0	chr12	122437243	122437274	(10838035)	+	AluJo	SINE/Alu	247	279	(33)	971820
43	0.0	0.0	0.0	chr12	122437276	122437312	(10837997)	+	(CA)n	Simple_repeat	1	37	(0)	971821
2296	10.4	0.3	0.0	chr12	122491548	122491845	(10783464)	+	AluSp	SINE/Alu	2	300	(13)	971981
1115	8.1	0.0	1.3	chr12	123445697	123445845	(9829464)	C	AluSx	SINE/Alu	(164)	148	2	974112
254	25.1	10.2	10.7	chr12	123446059	123446245	(9829064)	C	MamRep488	DNA/hAT-Tip100	(33)	186	1	974113
645	17.0	1.6	0.4	chr12	124092486	124093690	(9181619)	+	(TGATGA)n	Simple_repeat	1	1224	(0)	975449
2127	13.6	0.7	0.0	chr12	124312317	124312610	(8962699)	C	AluJb	SINE/Alu	(16)	296	1	975873
195	32.1	0.0	0.0	chr12	124505799	124505851	(8769458)	C	MIR1_Amn	SINE/MIR	(53)	177	125	976173
393	19.6	0.0	0.2	chr12	124506176	124506261	(8769048)	C	MIRb	SINE/MIR	(46)	162	78	976174
50	0.0	0.0	0.0	chr12	124519090	124519132	(8756177)	+	(AC)n	Simple_repeat	1	43	(0)	976197
313	32.2	10.1	0.7	chr12	124519146	124519298	(8756011)	+	MIRb	SINE/MIR	35	203	(65)	976198
429	19.0	0.0	0.0	chr12	124624930	124625008	(8650301)	+	MLT1D	LTR/ERVL-MaLR	1	79	(426)	976429
1651	19.1	3.7	9.3	chr12	124625019	124625257	(8650052)	C	MLT1B	LTR/ERVL-MaLR	(10)	380	160	976430
1785	17.8	1.4	1.0	chr12	124625258	124625550	(8649759)	+	AluJo	SINE/Alu	2	295	(17)	976431
702	27.1	5.3	4.0	chr12	124795664	124795963	(8479346)	+	MER113	DNA/hAT-Charlie	83	386	(135)	976848
1866	12.9	7.6	0.0	chr12	124795973	124796250	(8479059)	C	AluSz	SINE/Alu	(11)	301	1	976849
286	35.4	8.5	2.3	chr12	130442840	130443059	(2832250)	+	L2a	LINE/L2	3192	3426	(0)	986662
982	34.3	5.0	1.7	chr12	130695599	130696067	(2579242)	C	L2	LINE/L2	(542)	2877	2393	987064
311	31.8	6.9	6.9	chr12	130696064	130696323	(2578986)	C	L2c	LINE/L2	(23)	3364	3105	987065
650	27.2	7.3	7.7	chr12	130696337	130696778	(2578531)	C	MER113	DNA/hAT-Charlie	(5)	516	77	987066
52	0.0	0.0	0.0	chr12	131454555	131454601	(1820708)	+	(AAAT)n	Simple_repeat	1	47	(0)	988136
235	24.1	1.3	0.7	chr12	132422672	132423266	(852043)	+	(CTCT)n	Simple_repeat	1	603	(0)	989438
208	15.8	3.0	3.9	chr12	132597406	132597907	(677402)	+	(CTGTCT)n	Simple_repeat	1	517	(0)	989641
19254	15.9	4.9	3.3	chr13	19911359	19912292	(94452036)	+	ERVL-B4-int	LTR/ERVL	1747	2668	(3046)	993370
1920	14.8	0.0	0.3	chr13	19912293	19912633	(94451695)	C	AluJb	SINE/Alu	(0)	312	1	993374
465	29.7	5.4	6.5	chr13	21513779	21514041	(92850287)	+	L1ME4b	LINE/L1	617	876	(16)	996260
723	15.4	5.6	0.9	chr13	21514065	21514235	(92850093)	C	Tigger3c	DNA/TcMar-Tigger	(33)	569	414	996261
3824	15.8	3.4	2.2	chr13	22927361	22928048	(91436280)	C	ERVL-B4-int	LTR/ERVL	(1630)	4084	3388	998111
15072	16.8	4.3	2.5	chr13	22928056	22928613	(91435715)	C	ERVL-B4-int	LTR/ERVL	(2904)	2810	2255	998111
6459	16.8	5.5	0.9	chr13	24348068	24350232	(90014096)	C	ERVL-B4-int	LTR/ERVL	(59)	5655	3388	1000158
1774	12.7	0.0	1.6	chr13	24350240	24350495	(90013833)	C	ERVL-B4-int	LTR/ERVL	(2904)	2810	2559	1000158
11655	18.2	4.0	3.0	chr13	24350490	24350523	(90013805)	C	ERVL-B4-int	LTR/ERVL	(3427)	2287	2255	1000158
1481	16.9	10.9	1.9	chr13	24350524	24350831	(90013497)	+	MER44A	DNA/TcMar-Tigger	1	339	(0)	1000160
1662	34.0	6.1	5.3	chr13	25088456	25089123	(89275205)	+	ERV24B_Prim-int	LTR/ERV1	2754	3419	(4194)	1001274
360	27.8	7.5	6.1	chr13	25152857	25153120	(89211208)	C	LTR16A1	LTR/ERVL	(0)	456	189	1001386
2206	21.2	1.2	6.0	chr13	26940789	26941309	(87423019)	+	MLT1E2	LTR/ERVL-MaLR	2	497	(130)	1004048
1877	35.0	4.3	0.7	chr13	26941320	26942133	(87422195)	+	ERVL-E-int	LTR/ERVL	2291	3134	(2533)	1004049
2511	7.6	0.0	0.3	chr13	27270062	27270375	(87093953)	C	AluSq	SINE/Alu	(0)	313	1	1004625
168	20.2	2.4	0.5	chr13	28531565	28531941	(85832387)	+	(TG)n	Simple_repeat	1	386	(0)	1006902
1075	25.5	3.2	1.6	chr13	32976954	32977304	(81387024)	+	MLT2D	LTR/ERVL	66	536	(19)	1013645
240	13.8	3.0	0.2	chr13	32977305	32977735	(81386593)	+	(TG)n	Simple_repeat	1	444	(0)	1013646
301	34.5	2.8	6.7	chr13	34431049	34431123	(79933205)	C	MLT1F	LTR/ERVL-MaLR	(432)	159	85	1015768
1185	32.8	8.3	2.9	chr13	34431163	34431809	(79932519)	C	ERVL-E-int	LTR/ERVL	(2946)	2721	2037	1015767
5212	20.3	8.7	3.5	chr13	41007791	41008958	(73355370)	+	Charlie1a	DNA/hAT-Charlie	1	1249	(206)	1025067
1644	25.2	7.4	1.5	chr13	45384069	45384535	(68979793)	C	ERVL-E-int	LTR/ERVL	(2381)	3286	2790	1032185
789	32.0	1.1	1.1	chr13	45384545	45384831	(68979497)	C	ERVL-E-int	LTR/ERVL	(2996)	2671	2385	1032185
909	28.8	8.1	1.6	chr13	45384892	45385188	(68979140)	+	MLT1I	LTR/ERVL-MaLR	19	342	(69)	1032186
46120	6.4	0.7	0.3	chr13	45753626	45759254	(68605074)	C	HERVL-int	LTR/ERVL	(0)	5654	1	1032782
2198	22.6	14.5	1.6	chr13	48574281	48574947	(65789381)	+	Arthur1	DNA/hAT-Tip100	25	791	(3156)	1037030
731	22.4	16.9	2.3	chr13	48574997	48575257	(65789071)	+	Arthur1B	DNA/hAT-Tip100	105	411	(814)	1037031
316	14.3	0.0	0.0	chr13	48575255	48575296	(65789032)	+	AluYj4	SINE/Alu	211	252	(59)	1037032
1158	32.5	7.4	2.9	chr13	48784749	48785386	(65578942)	C	ERVL-E-int	LTR/ERVL	(2702)	3055	2279	1037324
4408	9.8	4.3	0.1	chr13	75282058	75283079	(39081249)	C	L1PB	LINE/L1	(456)	5718	4664	1073098
310	32.6	0.0	0.0	chr13	75283080	75283168	(39081160)	+	L2c	LINE/L2	3299	3387	(0)	1073091
207	37.5	5.6	2.2	chr13	77948276	77948414	(36415914)	+	MIRb	SINE/MIR	14	157	(111)	1076880
201	28.7	2.2	7.5	chr13	77948565	77948658	(36415670)	C	L2c	LINE/L2	(1880)	1539	1451	1076873
200	34.4	0.0	5.1	chr13	78394714	78394811	(35969517)	+	MIRc	SINE/MIR	104	196	(72)	1077466
2206	15.6	1.3	4.0	chr13	78394884	78395187	(35969141)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	91	1077467
10832	23.8	2.8	0.5	chr13	85945244	85947583	(28416745)	C	ERVL-B4-int	LTR/ERVL	(1114)	4600	2206	1087165
9951	11.8	0.6	0.1	chr13	88281234	88282634	(26081694)	+	HERVL-int	LTR/ERVL	1374	2782	(2872)	1090119
20215	9.1	1.2	0.3	chr13	90153311	90156051	(24208277)	C	HERVL-int	LTR/ERVL	(2890)	2764	1	1092571
25623	22.2	3.6	1.9	chr13	97768180	97773503	(16590825)	C	ERVL-E-int	LTR/ERVL	(243)	5424	5	1103465
460	26.4	6.7	4.3	chr13	98900608	98900834	(15463494)	C	MIRc	SINE/MIR	(32)	236	1	1105381
552	13.0	6.1	3.1	chr13	100338225	100338351	(14025977)	C	Charlie1a	DNA/hAT-Charlie	(59)	1396	1266	1107812
575	25.9	6.5	3.3	chr13	100338357	100338536	(14025792)	C	Charlie1	DNA/hAT-Charlie	(2594)	187	2	1107813
3250	8.2	2.0	1.1	chr13	102706304	102706737	(11657591)	C	L1PA8	LINE/L1	(5)	6167	5730	1111159
2459	34.4	6.6	3.6	chr13	107134608	107137041	(7227287)	C	ERVL-E-int	LTR/ERVL	(2648)	3019	480	1117005
10389	8.5	0.5	0.1	chr13	109948268	109949580	(4414748)	+	HERVL-int	LTR/ERVL	1688	3005	(2649)	1120714
3341	7.5	0.8	13.0	chr13	110965260	110965842	(3398486)	+	LTR10F	LTR/ERV1	1	511	(0)	1121994
168	27.8	2.3	1.7	chr13	111044081	111044596	(3319732)	+	(CA)n	Simple_repeat	1	528	(0)	1122091
30591	7.1	1.0	0.2	chr14	20569321	20573123	(86470595)	+	HERVL-int	LTR/ERVL	1823	5654	(0)	1128281
306	31.1	1.5	7.5	chr14	23400519	23400664	(83643054)	+	L2b	LINE/L2	3237	3373	(2)	1132813
14	18.4	2.1	4.2	chr14	24141475	24141521	(82902197)	+	(GCCCCCG)n	Simple_repeat	1	48	(0)	1133811
3457	19.2	4.1	0.1	chr14	27955933	27956588	(79087130)	C	ERVL-B4-int	LTR/ERVL	(2913)	2801	2119	1138683
36045	7.2	0.9	0.0	chr14	29171663	29176239	(77867479)	+	HERVL-int	LTR/ERVL	1035	5654	(0)	1140195
13808	15.5	2.1	0.6	chr14	31975308	31977486	(75066232)	C	ERVL-B4-int	LTR/ERVL	(1200)	4514	2304	1144464
45	18.8	3.9	3.7	chr14	34122746	34122877	(72920841)	+	GA-rich	Low_complexity	1	132	(0)	1147275
2545	29.1	7.2	5.5	chr14	34317555	34318055	(72725663)	C	ERVL-E-int	LTR/ERVL	(990)	4236	3727	1147568
398	30.4	1.2	0.2	chr14	34318065	34318194	(72725524)	+	ERV3-16A3_I-int	LTR/ERVL	3574	3820	(1847)	1147571
3414	27.1	5.0	3.8	chr14	34318184	34319220	(72724498)	C	ERVL-E-int	LTR/ERVL	(3102)	2565	1515	1147568
43622	7.5	1.3	0.1	chr14	39893672	39899252	(67144466)	+	HERVL-int	LTR/ERVL	1	5654	(0)	1156290
32000	9.5	1.0	0.2	chr14	40007197	40011408	(67032310)	+	HERVL-int	LTR/ERVL	1304	5654	(0)	1156403
13070	10.6	0.2	1.2	chr14	50547078	50548515	(56495203)	+	LTR57-int	LTR/ERVL	1326	2761	(2582)	1170140
23233	8.1	0.4	0.6	chr14	51373849	51376815	(55666903)	+	HERVL-int	LTR/ERVL	831	3790	(1864)	1171381
28793	14.2	1.4	1.7	chr14	53557375	53562143	(53481575)	+	ERVL-int	LTR/ERVL	562	5316	(441)	1174689
40078	6.9	1.0	0.8	chr14	57721091	57726728	(49316990)	+	HERVL-int	LTR/ERVL	1	5653	(1)	1181119
2478	25.9	14.1	4.2	chr14	58494047	58495168	(48548550)	C	L1MEh	LINE/L1	(965)	1270	19	1182353
18415	14.1	2.4	0.9	chr14	59221028	59224459	(47819259)	C	ERVL-int	LTR/ERVL	(10)	5747	2273	1183447
736	29.5	8.1	4.5	chr14	61021261	61021618	(46022100)	+	L3	LINE/CR1	3719	4090	(9)	1185881
350	23.0	7.3	12.2	chr14	61021897	61022084	(46021634)	+	MIR3	SINE/MIR	14	191	(17)	1185882
477	10.3	8.4	0.0	chr14	61219238	61219324	(45824394)	C	MER53	DNA/hAT	(0)	193	99	1186186
41	2.6	0.0	0.0	chr14	61367346	61367385	(45676333)	+	(GT)n	Simple_repeat	1	40	(0)	1186417
261	23.9	5.6	0.0	chr14	61367484	61367550	(45676168)	+	L2c	LINE/L2	3314	3384	(3)	1186418
151	19.6	3.4	2.2	chr14	65173933	65174320	(41869398)	+	(GT)n	Simple_repeat	1	401	(0)	1192581
3191	20.4	11.5	7.0	chr14	69219530	69220253	(37823465)	C	L1ME3B	LINE/L1	(1599)	4547	3735	1199097
35321	6.4	0.9	0.4	chr14	69822976	69827310	(37216408)	C	HERVL-int	LTR/ERVL	(1300)	4354	1	1200254
41085	6.6	2.4	0.4	chr14	71459860	71464360	(35579358)	C	HERVL-int	LTR/ERVL	(0)	5654	1093	1202846
36326	6.4	1.1	0.3	chr14	71936518	71940970	(35102748)	C	HERVL-int	LTR/ERVL	(0)	5654	1168	1203544
96	21.9	2.3	0.0	chr14	72690408	72690662	(34353056)	+	(CA)n	Simple_repeat	1	260	(0)	1204635
328	24.3	8.3	9.0	chr14	72779970	72780091	(34263627)	+	L2b	LINE/L2	3255	3375	(0)	1204798
663	15.4	0.0	13.4	chr14	72962348	72962496	(34081222)	+	AluJo	SINE/Alu	1	129	(183)	1205165
16	12.6	0.0	0.0	chr14	72962497	72962521	(34081197)	+	(CA)n	Simple_repeat	1	25	(0)	1205166
1964	8.0	5.1	1.5	chr14	72962522	72962784	(34080934)	C	AluSx1	SINE/Alu	(39)	273	1	1205167
20	22.9	3.9	6.5	chr14	77098386	77098489	(29945229)	+	GA-rich	Low_complexity	1	108	(0)	1213611
44372	7.1	1.3	0.1	chr14	80225247	80230830	(26812888)	C	HERVL-int	LTR/ERVL	(0)	5654	1	1218907
30815	10.4	0.6	0.5	chr14	81844100	81848542	(25195176)	C	HERVL-int	LTR/ERVL	(1206)	4448	1	1221284
32376	7.4	1.2	0.5	chr14	85929529	85933716	(21110002)	C	HERVL-int	LTR/ERVL	(1436)	4218	1	1226945
40678	7.1	1.3	2.3	chr14	90229743	90232953	(16810765)	+	HERVL-int	LTR/ERVL	2257	5420	(234)	1233521
2358	7.1	0.0	2.0	chr14	90730956	90731250	(16312468)	C	AluY	SINE/Alu	(22)	289	1	1234359
345	31.4	11.9	3.6	chr14	90890884	90891247	(16152471)	+	L2b	LINE/L2	3000	3425	(1)	1234653
1349	27.3	3.9	8.5	chr14	91250864	91251371	(15792347)	+	MLT1G1	LTR/ERVL-MaLR	1	526	(53)	1235402
2519	5.7	0.3	0.0	chr14	91251372	91251671	(15792047)	C	AluY	SINE/Alu	(10)	301	1	1235403
38	19.1	0.0	0.0	chr14	92709878	92709954	(14333764)	+	GA-rich	Low_complexity	1	77	(0)	1238073
53	0.0	0.0	0.0	chr14	94434308	94434352	(12609366)	+	(TG)n	Simple_repeat	1	45	(0)	1241130
2042	10.2	4.8	0.0	chr14	94434354	94434628	(12609090)	C	AluSz	SINE/Alu	(19)	293	5	1241131
621	20.1	4.1	1.8	chr14	94889392	94890935	(12152783)	+	(GT)n	Simple_repeat	1	1585	(0)	1242059
277	16.7	3.7	11.4	chr14	95080872	95080959	(11962759)	+	L1ME3	LINE/L1	6081	6161	(1)	1242423
396	26.1	14.2	4.5	chr14	95080979	95081243	(11962475)	+	L1ME4b	LINE/L1	592	886	(6)	1242424
383	33.2	2.3	9.2	chr14	95872580	95872808	(11170910)	+	L2c	LINE/L2	3024	3236	(151)	1243871
190	23.1	0.0	0.0	chr14	95872779	95872817	(11170901)	+	L2a	LINE/L2	3386	3424	(2)	1243872
367	37.1	1.6	3.9	chr14	95873312	95873570	(11170148)	+	L2c	LINE/L2	2943	3199	(188)	1243873
15	26.6	3.7	0.0	chr14	96502534	96502587	(10541131)	+	(GGC)n	Simple_repeat	1	56	(0)	1245031
13	17.5	0.0	2.9	chr14	96502911	96502944	(10540774)	+	A-rich	Low_complexity	1	34	(0)	1245032
489	26.6	0.0	0.0	chr14	97861574	97861686	(9182032)	C	L2a	LINE/L2	(10)	3416	3304	1247399
119	26.3	0.7	1.3	chr14	99657681	99657983	(7385735)	+	(AC)n	Simple_repeat	1	305	(0)	1250382
1001	26.1	9.6	4.2	chr14	101511051	101511454	(5532264)	+	ERV3-16A3_I-int	LTR/ERVL	2069	2496	(2730)	1253241
739	24.7	5.5	0.5	chr14	101511477	101511700	(5532018)	+	ERV3-16A3_I-int	LTR/ERVL	4977	5212	(14)	1253241
962	23.9	4.6	0.0	chr14	101511742	101512013	(5531705)	+	LTR16A	LTR/ERVL	73	357	(94)	1253242
8347	28.4	8.3	6.8	chr14	101592469	101594867	(5448851)	+	ERV3-16A3_I-int	LTR/ERVL	1713	4133	(1093)	1253376
683	0.0	0.0	0.0	chr14	102317092	102317165	(4726553)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	1254658
16	0.0	0.0	0.0	chr14	102317173	102317189	(4726529)	+	(T)n	Simple_repeat	1	17	(0)	1254659
29	0.0	0.0	0.0	chr14	103105359	103105383	(3938335)	+	(TG)n	Simple_repeat	1	25	(0)	1256205
2558	7.6	0.0	0.3	chr14	103148970	103149283	(3894435)	+	AluSq2	SINE/Alu	1	313	(0)	1256279
1264	29.6	5.2	1.5	chr14	103149449	103149852	(3893866)	C	ERVL-E-int	LTR/ERVL	(3039)	2628	2209	1256262
916	15.3	1.4	0.0	chr14	103753751	103753887	(3289831)	C	AluJb	SINE/Alu	(15)	297	159	1257401
1974	12.9	0.4	0.0	chr14	104022446	104022764	(3020954)	+	AluSz	SINE/Alu	1	312	(0)	1257986
586	29.7	0.5	3.2	chr14	104022765	104022898	(3020820)	+	MIRb	SINE/MIR	27	158	(110)	1257987
2331	9.8	0.0	1.6	chr14	104022899	104023214	(3020504)	+	AluSx1	SINE/Alu	2	312	(0)	1257988
5886	18.5	8.4	1.5	chr14	104464793	104465980	(2577738)	C	ERVL-B4-int	LTR/ERVL	(983)	4671	3394	1258447
15365	16.9	3.1	2.8	chr14	104465976	104466530	(2577188)	C	ERVL-B4-int	LTR/ERVL	(2905)	2809	2256	1258447
280	21.8	2.5	4.3	chr14	104471615	104472483	(2571235)	+	(CA)n	Simple_repeat	1	891	(0)	1258451
332	33.4	11.1	3.3	chr14	104514298	104514823	(2528895)	C	L2b	LINE/L2	(25)	3350	2790	1258496
45589	18.2	2.4	3.5	chr14	106836776	106845293	(198425)	C	HERV3-int	LTR/ERV1	(3)	8423	1	1261124
2131	19.2	3.0	0.7	chr15	26644259	26644688	(75346501)	+	MLT1C	LTR/ERVL-MaLR	28	467	(0)	1271712
279	7.5	11.7	0.0	chr15	28218775	28218827	(73772362)	C	L1MC1	LINE/L1	(9)	6324	6265	1273524
654	21.1	5.2	0.0	chr15	28218828	28218955	(73772234)	C	AluJb	SINE/Alu	(4)	308	174	1273525
2328	11.3	0.0	0.0	chr15	29782992	29783291	(72207898)	+	AluSp	SINE/Alu	1	300	(13)	1276004
4963	10.7	7.5	2.5	chr15	29783292	29783959	(72207230)	+	L1PREC2	LINE/L1	5442	6153	(7)	1276003
291	15.6	5.7	4.5	chr15	30172483	30173339	(71817850)	+	(GT)n	Simple_repeat	1	906	(0)	1276664
16	22.7	2.2	0.0	chr15	31813206	31813251	(70177938)	+	(ATGCCG)n	Simple_repeat	1	47	(0)	1279064
61	0.0	0.0	0.0	chr15	34515281	34515332	(67475857)	+	(CT)n	Simple_repeat	1	52	(0)	1282968
38	0.0	0.0	0.0	chr15	34515333	34515374	(67475815)	+	(GT)n	Simple_repeat	1	42	(0)	1282969
365	33.3	3.6	0.7	chr15	35914241	35914376	(66076813)	C	MIR	SINE/MIR	(121)	141	2	1284993
152	6.7	0.0	0.5	chr15	44288396	44288599	(57702590)	+	(GAGA)n	Simple_repeat	1	204	(0)	1298571
15714	9.4	2.2	1.6	chr15	51568815	51573077	(50418112)	+	L1PA7	LINE/L1	7	4281	(1865)	1309709
5814	11.3	4.3	3.6	chr15	56219370	56220215	(45770974)	C	L1PA15	LINE/L1	(6)	6159	5312	1316861
16525	6.6	0.6	0.2	chr15	58207502	58210595	(43780594)	+	HERVL-int	LTR/ERVL	1590	5654	(0)	1319766
398	26.7	5.1	1.5	chr15	58360310	58360442	(43630747)	C	L2a	LINE/L2	(0)	3426	3289	1320039
1995	19.4	5.8	2.5	chr15	58360448	58360896	(43630293)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	3	1320040
234	25.0	1.4	1.4	chr15	65285773	65285841	(36705348)	C	MIRc	SINE/MIR	(6)	262	194	1332296
836	24.7	9.7	1.3	chr15	66106426	66106651	(35884538)	C	MIR	SINE/MIR	(0)	262	16	1333985
247	34.2	6.7	4.7	chr15	66863475	66863664	(35127525)	+	L2c	LINE/L2	3022	3215	(172)	1335607
44374	7.0	2.2	1.8	chr15	66892341	66895301	(35095888)	C	HUERS-P1-int	LTR/ERV1	(3311)	2952	2	1335658
465	30.9	9.7	6.0	chr15	66919229	66919558	(35071631)	C	L2c	LINE/L2	(184)	3203	2825	1335709
18	0.0	0.0	0.0	chr15	68820633	68820652	(33170537)	+	(CA)n	Simple_repeat	1	20	(0)	1339122
2528	9.1	0.0	0.0	chr15	68880071	68880366	(33110823)	C	AluSx1	SINE/Alu	(16)	296	1	1339237
850	33.3	7.8	1.6	chr15	68880367	68880811	(33110378)	+	ERVL-E-int	LTR/ERVL	2275	2756	(2911)	1339235
1770	14.4	3.4	4.6	chr15	68880820	68880870	(33110319)	+	MER44A	DNA/TcMar-Tigger	17	75	(264)	1339238
186	16.2	15.9	0.0	chr15	69225482	69225518	(32765671)	+	L2b	LINE/L2	3322	3365	(10)	1339828
574	27.7	8.7	3.4	chr15	69225702	69225940	(32765249)	C	MIR	SINE/MIR	(8)	254	2	1339829
27431	13.9	2.8	2.1	chr15	69350667	69354654	(32636535)	+	ERVL-B4-int	LTR/ERVL	1704	5714	(0)	1340052
37	29.5	0.0	0.0	chr15	69761265	69761315	(32229874)	+	(ATCC)n	Simple_repeat	1	51	(0)	1340864
96	11.4	0.0	0.0	chr15	69761316	69761476	(32229713)	+	(CATC)n	Simple_repeat	1	161	(0)	1340865
37	29.5	0.0	0.0	chr15	69761477	69761538	(32229651)	+	(ATCC)n	Simple_repeat	4	65	(0)	1340866
454	32.0	5.0	5.7	chr15	69761541	69761799	(32229390)	C	L2b	LINE/L2	(0)	3426	3149	1340867
399	26.0	2.0	1.0	chr15	70294746	70294846	(31696343)	C	MER5B	DNA/hAT-Charlie	(46)	132	31	1341881
315	31.2	7.2	2.1	chr15	70294921	70295064	(31696125)	+	MIRb	SINE/MIR	101	252	(16)	1341882
464	28.1	3.8	2.5	chr15	70295124	70295280	(31695909)	+	MIR3	SINE/MIR	19	177	(31)	1341883
321	23.2	18.3	2.3	chr15	70295343	70295470	(31695719)	+	MER5B	DNA/hAT-Charlie	1	153	(25)	1341884
180	31.6	10.2	2.2	chr15	70313895	70314075	(31677114)	+	L2	LINE/L2	305	501	(2918)	1341922
383	27.5	2.2	0.0	chr15	70314213	70314316	(31676873)	+	MIRc	SINE/MIR	57	165	(65)	1341923
43	30.3	2.3	2.8	chr15	70534271	70534432	(31456757)	+	GA-rich	Low_complexity	1	161	(0)	1342326
50	2.0	0.0	0.0	chr15	70534433	70534482	(31456707)	+	(AAGG)n	Simple_repeat	1	50	(0)	1342327
17	12.4	6.5	2.0	chr15	70534521	70534566	(31456623)	+	G-rich	Low_complexity	1	49	(0)	1342328
434	21.1	1.8	1.8	chr15	70534571	70534681	(31456508)	+	HAL1ME	LINE/L1	123	233	(2232)	1342329
297	13.6	0.0	0.0	chr15	71199395	71199438	(30791751)	C	MER20	DNA/hAT-Charlie	(1)	218	175	1343346
250	7.3	5.0	2.1	chr15	71199440	71199936	(30791253)	+	(TG)n	Simple_repeat	1	522	(0)	1343347
12	17.0	2.2	6.5	chr15	72230804	72230848	(29760341)	+	(GAGGATG)n	Simple_repeat	1	46	(0)	1345108
1283	10.1	3.4	27.3	chr15	72546491	72546885	(29444304)	C	AluJo	SINE/Alu	(11)	301	5	1345678
2501	6.9	0.0	4.1	chr15	72546908	72547226	(29443963)	C	AluY	SINE/Alu	(5)	306	1	1345679
630	26.4	16.9	1.4	chr15	74120632	74120850	(27870339)	+	MIRb	SINE/MIR	5	264	(4)	1348292
25	20.0	9.2	3.5	chr15	74120911	74121041	(27870148)	+	(TCTCCC)n	Simple_repeat	1	143	(0)	1348293
2343	10.8	0.0	0.0	chr15	74496370	74496666	(27494523)	+	AluSx1	SINE/Alu	1	297	(15)	1348935
1181	10.7	14.8	0.0	chr15	74496667	74496741	(27494448)	C	MER30	DNA/hAT-Charlie	(129)	101	2	1348934
6788	23.9	7.0	10.4	chr15	74496742	74497999	(27493190)	C	ERV3-16A3_I-int	LTR/ERVL	(2702)	2524	1247	1348929
204	14.8	3.9	1.8	chr15	77623826	77624257	(24366932)	+	(GT)n	Simple_repeat	1	449	(0)	1354367
16	36.2	1.2	2.3	chr15	77668676	77668760	(24322429)	+	(CA)n	Simple_repeat	1	86	(0)	1354434
53	0.0	0.0	0.0	chr15	77668793	77668837	(24322352)	+	(AC)n	Simple_repeat	1	45	(0)	1354435
294	25.8	19.5	1.5	chr15	78509230	78509363	(23481826)	C	MIR3	SINE/MIR	(12)	196	33	1356051
223	28.1	4.3	5.3	chr15	78509464	78509557	(23481632)	+	L3	LINE/CR1	4003	4095	(4)	1356052
408	9.9	8.2	0.5	chr15	79091868	79092673	(22898516)	+	(AC)n	Simple_repeat	1	872	(0)	1357226
2212	32.9	7.0	5.1	chr15	79609620	79610491	(22380698)	C	ERVL-E-int	LTR/ERVL	(2523)	3144	2263	1358106
701	31.1	8.5	5.6	chr15	79678508	79678564	(22312625)	C	L2c	LINE/L2	(0)	3387	3328	1358207
586	27.3	9.3	1.0	chr15	79678565	79678760	(22312429)	C	MER58C	DNA/hAT-Charlie	(1)	214	1	1358208
701	31.1	8.5	5.6	chr15	79678761	79679080	(22312109)	C	L2c	LINE/L2	(60)	3327	2998	1358207
3819	7.2	1.9	0.0	chr15	79874743	79875266	(22115923)	C	MER11B	LTR/ERVK	(702)	534	1	1358521
771	16.4	2.3	2.1	chr15	79875267	79875489	(22115700)	+	L1M4	LINE/L1	2053	2300	(5579)	1358520
2075	15.8	5.3	0.2	chr15	79875458	79875906	(22115283)	+	L1M4	LINE/L1	4869	5341	(805)	1358522
101	5.2	4.9	0.0	chr15	81878199	81878340	(20112849)	+	(CT)n	Simple_repeat	1	149	(0)	1361954
420	35.0	8.7	3.7	chr15	83010833	83011235	(18979954)	C	L2c	LINE/L2	(36)	3351	2927	1363867
5016	12.0	3.9	0.3	chr15	83218541	83219950	(18771239)	+	L1PA17	LINE/L1	4716	6166	(0)	1364260
1059	31.2	5.9	3.6	chr15	83275521	83275954	(18715235)	C	L2a	LINE/L2	(199)	3227	2776	1364349
1946	15.2	2.3	0.0	chr15	84734672	84734966	(17256223)	C	AluJb	SINE/Alu	(10)	302	1	1366543
780	32.4	4.0	5.8	chr15	88725587	88726038	(13265151)	+	CR1_Mam	LINE/CR1	86	529	(1675)	1372901
672	9.5	0.0	0.0	chr15	89094166	89094249	(12896940)	C	AluSx3	SINE/Alu	(53)	258	175	1373639
2197	12.3	0.0	0.3	chr15	89094426	89094735	(12896454)	+	AluSx	SINE/Alu	2	310	(2)	1373640
345	23.1	7.1	0.0	chr15	92445013	92445103	(9546086)	+	MIR3	SINE/MIR	54	151	(57)	1379889
1245	21.2	7.9	6.0	chr15	92714100	92714481	(9276708)	+	L1MB3	LINE/L1	5796	6176	(7)	1380273
13	23.2	0.0	2.4	chr15	92714586	92714627	(9276562)	+	(CCCCTC)n	Simple_repeat	1	42	(0)	1380277
298	16.3	2.0	0.0	chr15	92853659	92853707	(9137482)	+	AluJb	SINE/Alu	233	282	(20)	1380613
37	0.0	0.0	0.0	chr15	92853708	92853741	(9137448)	+	(AAAACA)n	Simple_repeat	1	34	(0)	1380619
727	7.7	0.0	2.8	chr15	92853758	92853864	(9137325)	+	L1MB3	LINE/L1	6080	6183	(0)	1380620
2872	29.7	7.9	3.7	chr15	96828606	96829445	(5161744)	C	ERVL-E-int	LTR/ERVL	(2323)	3344	2476	1386411
396	30.3	5.3	2.1	chr15	98761817	98761961	(3229228)	C	L2b	LINE/L2	(0)	3375	3226	1389130
551	26.7	5.7	2.7	chr15	100701477	100701546	(1289643)	C	L1ME3E	LINE/L1	(16)	6226	6158	1391819
2151	13.8	1.3	0.7	chr15	100701547	100701851	(1289338)	+	AluSx3	SINE/Alu	1	307	(4)	1391820
2334	10.1	0.0	2.2	chr15	101119542	101119859	(871330)	C	AluSx	SINE/Alu	(1)	311	1	1392351
2022	13.0	0.4	0.0	chr16	46447	46765	(90291580)	+	AluSx	SINE/Alu	5	312	(0)	1394104
264	12.2	5.3	2.5	chr16	977814	978374	(89359971)	+	(AC)n	Simple_repeat	1	591	(0)	1395371
57	0.0	0.0	0.0	chr16	981283	981303	(89357042)	+	(TG)n	Simple_repeat	1	21	(0)	1395376
53	0.0	0.0	0.0	chr16	981304	981348	(89356997)	+	(GA)n	Simple_repeat	1	45	(0)	1395377
57	0.0	0.0	0.0	chr16	981349	981391	(89356954)	+	(TG)n	Simple_repeat	2	44	(0)	1395378
29	35.3	0.8	2.3	chr16	1272869	1272958	(89065387)	+	(GATG)n	Simple_repeat	1	89	(0)	1395667
54	8.9	2.6	2.6	chr16	1272959	1273071	(89065274)	+	(TGGA)n	Simple_repeat	1	116	(0)	1395668
29	35.3	0.8	2.3	chr16	1273072	1273110	(89065235)	+	(GATG)n	Simple_repeat	2	40	(0)	1395669
604	30.5	8.4	1.0	chr16	1494903	1495200	(88843145)	+	MER119	DNA/hAT-Charlie	66	387	(196)	1396011
2380	9.6	0.3	0.0	chr16	1606458	1606759	(88731586)	C	AluSp	SINE/Alu	(10)	303	1	1396162
79	31.6	1.5	0.4	chr16	1606813	1607072	(88731273)	+	(AC)n	Simple_repeat	1	264	(0)	1396163
878	29.3	8.4	4.6	chr16	2100673	2100984	(88237361)	+	Tigger6a	DNA/TcMar-Tigger	1	342	(741)	1396892
15	24.9	0.0	3.9	chr16	2268061	2268111	(88070234)	+	(CCG)n	Simple_repeat	1	51	(0)	1397131
1919	19.3	0.3	0.0	chr16	3050780	3051090	(87287255)	C	AluJb	SINE/Alu	(0)	312	1	1398409
266	13.1	0.0	2.1	chr16	3051129	3051175	(87287170)	C	MLT2C1	LTR/ERVL	(2)	561	516	1398410
34	14.4	1.6	1.6	chr16	3051176	3051238	(87287107)	+	(GT)n	Simple_repeat	1	64	(0)	1398411
1568	19.1	4.0	3.4	chr16	3051240	3051592	(87286753)	C	MLT2C1	LTR/ERVL	(42)	355	1	1398410
624	1.4	0.0	0.0	chr16	3191989	3192061	(87146284)	+	tRNA-Pro-CCY	tRNA	1	73	(2)	1398699
2155	8.0	1.0	0.0	chr16	3192064	3192352	(87145993)	C	AluY	SINE/Alu	(19)	292	1	1398700
2421	6.3	1.0	0.3	chr16	3263367	3263666	(87074679)	C	AluSx4	SINE/Alu	(8)	302	1	1398853
531	20.0	7.8	4.8	chr16	3870872	3870996	(86467349)	+	FLAM_A	SINE/Alu	1	129	(13)	1399951
54	10.5	4.5	2.6	chr16	3871017	3871139	(86467206)	+	A-rich	Low_complexity	1	125	(0)	1399952
20	4.1	0.0	0.0	chr16	3871175	3871199	(86467146)	+	(TC)n	Simple_repeat	1	25	(0)	1399953
41	0.0	0.0	0.0	chr16	3871200	3871234	(86467111)	+	(CA)n	Simple_repeat	1	35	(0)	1399954
19	18.5	5.5	0.0	chr16	4425753	4425807	(85912538)	+	(GCGCGT)n	Simple_repeat	1	58	(0)	1401122
2209	13.1	0.0	0.3	chr16	11193227	11193531	(79144814)	C	AluSx	SINE/Alu	(8)	304	1	1415069
72	27.4	1.8	1.3	chr16	11193546	11193777	(79144568)	+	(TCCTCC)n	Simple_repeat	1	233	(0)	1415070
1722	22.2	1.6	0.3	chr16	11193778	11194079	(79144266)	C	AluJb	SINE/Alu	(0)	312	7	1415071
1030	19.0	1.1	0.0	chr16	11417232	11417405	(78920940)	C	AluJb	SINE/Alu	(17)	295	120	1415626
295	17.3	0.0	0.0	chr16	11417406	11417457	(78920888)	+	MLT1C	LTR/ERVL-MaLR	416	467	(0)	1415625
1539	20.4	0.0	3.2	chr16	11446173	11446457	(78891888)	C	AluJo	SINE/Alu	(36)	276	1	1415696
1899	12.1	0.6	7.5	chr16	11584926	11585256	(78753089)	+	AluSz6	SINE/Alu	1	308	(4)	1416027
747	21.5	0.0	0.0	chr16	11967339	11967468	(78370877)	+	FLAM_A	SINE/Alu	1	130	(12)	1416934
984	15.8	0.0	0.0	chr16	14296620	14296777	(76041568)	C	AluJr	SINE/Alu	(18)	294	137	1421800
90	33.0	1.8	2.8	chr16	14296778	14297157	(76041188)	+	(TTTC)n	Simple_repeat	1	387	(0)	1421801
254	28.8	14.3	7.0	chr16	14391102	14391156	(75947189)	C	MIRb	SINE/MIR	(3)	265	223	1422038
53	0.0	0.0	0.0	chr16	14391157	14391204	(75947141)	+	(ATTT)n	Simple_repeat	1	48	(0)	1422039
2144	12.9	0.0	0.0	chr16	14391205	14391490	(75946855)	C	AluSq2	SINE/Alu	(27)	286	1	1422040
2246	10.8	0.0	1.0	chr16	15591311	15591594	(74746751)	+	AluSc	SINE/Alu	1	282	(27)	1424783
44	0.0	4.4	0.0	chr16	15591595	15591639	(74746706)	+	(AC)n	Simple_repeat	1	47	(0)	1424784
2246	10.8	0.0	1.0	chr16	15591640	15591660	(74746685)	+	AluSc	SINE/Alu	283	303	(6)	1424783
1437	12.7	0.5	0.0	chr16	15591690	15591886	(74746459)	+	AluSx	SINE/Alu	96	293	(19)	1424785
2432	8.9	0.0	1.3	chr16	15891164	15891479	(74446866)	+	AluSq2	SINE/Alu	2	313	(0)	1425489
817	15.3	4.5	1.3	chr16	15891485	15891634	(74446711)	+	AluJb	SINE/Alu	119	273	(39)	1425490
48	3.1	1.4	5.3	chr16	15891648	15891721	(74446624)	+	(CCTT)n	Simple_repeat	1	75	(0)	1425491
49	18.6	2.7	0.9	chr16	15891735	15891844	(74446501)	+	(CTTT)n	Simple_repeat	1	113	(0)	1425492
2250	9.1	0.3	0.0	chr16	21820979	21821308	(68517037)	C	AluSx	SINE/Alu	(0)	312	1	1438712
2204	14.9	2.5	0.0	chr16	23035002	23035356	(67302989)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1441340
1422	26.7	2.8	2.3	chr16	23035357	23035516	(67302829)	+	ERV3-16A3_LTR	LTR/ERVL	231	394	(28)	1441339
880	25.2	4.8	2.9	chr16	23035559	23035762	(67302583)	+	MER58A	DNA/hAT-Charlie	5	212	(12)	1441341
38273	13.0	2.7	0.6	chr16	23992260	23997897	(66340448)	+	ERVL-int	LTR/ERVL	1	5757	(0)	1443630
2047	13.5	5.5	4.2	chr16	27679120	27679472	(62658873)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	23	1451696
32	2.9	0.0	0.0	chr16	28535240	28535274	(61803071)	+	(TCCTTCCC)n	Simple_repeat	1	35	(0)	1453776
17	17.8	2.5	0.0	chr16	28535278	28535317	(61803028)	+	(CTTT)n	Simple_repeat	1	41	(0)	1453777
1531	19.8	0.0	4.8	chr16	28535318	28535503	(61802842)	C	AluJo	SINE/Alu	(11)	301	130	1453778
154	5.5	0.4	4.0	chr16	28535504	28535730	(61802615)	+	(TTTC)n	Simple_repeat	1	228	(0)	1453779
29309	7.6	1.8	0.9	chr16	29003035	29006845	(61331500)	+	HERVL-int	LTR/ERVL	1725	5578	(76)	1454969
248	7.3	7.1	0.6	chr16	30045246	30045752	(60292593)	+	(GT)n	Simple_repeat	1	543	(0)	1457143
2398	6.1	0.0	0.3	chr16	30052415	30052698	(60285647)	+	AluSz	SINE/Alu	1	284	(28)	1457165
46	0.0	4.1	0.0	chr16	30052699	30052747	(60285598)	+	(AAAT)n	Simple_repeat	1	51	(0)	1457166
355	27.4	4.9	3.3	chr16	30570596	30570716	(59767629)	+	MIRb	SINE/MIR	115	237	(31)	1458364
51	0.0	0.0	0.0	chr16	30570723	30570768	(59767577)	+	(TTAT)n	Simple_repeat	1	46	(0)	1458365
322	5.1	0.0	0.0	chr16	30570769	30570807	(59767538)	C	Alu	SINE/Alu	(18)	283	245	1458366
12	31.9	0.0	4.5	chr16	30985333	30985399	(59352946)	+	(TCCC)n	Simple_repeat	1	67	(0)	1459337
1227	18.5	0.8	4.5	chr16	46717984	46718226	(43620119)	+	MER106A	DNA/hAT-Charlie	3	236	(0)	1465883
2264	10.6	0.0	0.7	chr16	48203586	48203877	(42134468)	+	AluSx	SINE/Alu	1	290	(22)	1468329
323	33.6	5.6	3.8	chr16	48203878	48203908	(42134437)	C	HAL1	LINE/L1	(130)	2377	2347	1468328
823	27.4	2.2	0.1	chr16	48203945	48204235	(42134110)	C	L1ME4b	LINE/L1	(405)	592	298	1468330
457	28.3	1.4	0.7	chr16	49454083	49454228	(40884117)	+	MLT1L	LTR/ERVL-MaLR	108	254	(356)	1470550
348	22.9	1.0	1.0	chr16	49477064	49477848	(40860497)	+	GA-rich	Low_complexity	1	793	(0)	1470595
8798	20.2	7.5	7.5	chr16	49477851	49479251	(40859094)	+	L1MDa	LINE/L1	115	1555	(5078)	1470594
64	30.0	2.6	2.9	chr16	50369211	50369478	(39968867)	+	(TCCT)n	Simple_repeat	1	275	(0)	1472325
842	30.0	6.3	5.3	chr16	50580585	50581070	(39757275)	+	Charlie8	DNA/hAT-Charlie	1	491	(1937)	1472779
202	20.0	2.2	0.0	chr16	50615244	50615288	(39723057)	+	MIRb	SINE/MIR	55	100	(168)	1472844
355	29.1	10.1	3.9	chr16	50615391	50615594	(39722751)	C	L2c	LINE/L2	(147)	3240	3023	1472845
239	34.5	2.3	0.0	chr16	50615644	50615727	(39722618)	C	L2c	LINE/L2	(529)	2890	2805	1472845
268	30.2	4.4	0.0	chr16	50615721	50615806	(39722539)	+	MIRb	SINE/MIR	117	206	(62)	1472846
171	24.0	5.3	4.2	chr16	50692531	50693302	(39645043)	+	(TG)n	Simple_repeat	1	813	(0)	1473001
395	27.7	0.4	0.3	chr16	51239240	51240280	(39098065)	+	(GGT)n	Simple_repeat	1	1045	(0)	1474007
99	27.3	4.1	3.7	chr16	53042154	53042591	(37295754)	+	(CCCT)n	Simple_repeat	1	456	(0)	1477083
260	13.6	0.2	0.2	chr16	53052893	53053313	(37285032)	+	(CCT)n	Simple_repeat	1	422	(0)	1477111
1963	15.9	5.0	10.1	chr16	53142779	53143196	(37195149)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1477345
55	0.0	2.9	4.2	chr16	53143334	53143403	(37194942)	+	(TTTA)n	Simple_repeat	1	72	(0)	1477346
2291	9.9	0.0	0.0	chr16	53143405	53143686	(37194659)	C	AluY	SINE/Alu	(29)	282	1	1477347
334	22.5	7.5	9.0	chr16	53701768	53701889	(36636456)	+	Charlie4z	DNA/hAT-Charlie	16	135	(32)	1478268
18	11.2	0.0	0.0	chr16	53702068	53702097	(36636248)	+	(ATG)n	Simple_repeat	1	30	(0)	1478269
618	24.0	6.7	1.9	chr16	53702100	53702256	(36636089)	C	MIR	SINE/MIR	(10)	252	88	1478270
20	23.8	3.6	3.5	chr16	56191467	56191550	(34146795)	+	(TCCCTC)n	Simple_repeat	1	87	(0)	1482660
32	20.2	1.3	1.3	chr16	56191748	56191823	(34146522)	+	(CCG)n	Simple_repeat	1	77	(0)	1482661
277	34.0	7.3	1.1	chr16	57060137	57060418	(33277927)	+	L2c	LINE/L2	2728	3028	(391)	1484264
93	15.0	7.1	1.9	chr16	57060421	57060659	(33277686)	+	(AC)n	Simple_repeat	1	256	(0)	1484265
133	13.0	2.3	2.9	chr16	57628843	57629108	(32709237)	+	(AGTGTG)n	Simple_repeat	1	272	(0)	1485455
151	12.2	6.9	1.7	chr16	57912568	57912900	(32425445)	+	(TG)n	Simple_repeat	1	356	(0)	1486045
22	23.0	1.5	4.3	chr16	63363709	63363778	(26974567)	+	A-rich	Low_complexity	1	67	(0)	1494775
32	32.4	1.4	2.7	chr16	66604020	66604163	(23734182)	+	(TG)n	Simple_repeat	1	146	(0)	1500045
2200	9.2	0.7	0.0	chr16	67554972	67555253	(22783092)	+	AluSp	SINE/Alu	1	284	(29)	1501869
56	0.0	0.0	0.0	chr16	67555254	67555303	(22783042)	+	(AAAT)n	Simple_repeat	1	50	(0)	1501870
2173	12.6	0.3	0.0	chr16	67555409	67555701	(22782644)	+	AluSg	SINE/Alu	1	294	(16)	1501871
44	0.0	0.0	0.0	chr16	67601218	67601255	(22737090)	+	(GT)n	Simple_repeat	1	38	(0)	1502002
273	12.8	0.0	0.0	chr16	67601256	67601294	(22737051)	C	AluSz6	SINE/Alu	(15)	297	259	1502003
51	0.0	0.0	0.0	chr16	67601295	67601338	(22737007)	+	(GT)n	Simple_repeat	1	44	(0)	1502004
1856	8.3	0.0	1.7	chr16	67601339	67601578	(22736767)	C	AluY	SINE/Alu	(12)	299	64	1502005
2073	11.0	0.7	0.7	chr16	68254312	68254637	(22083708)	C	AluSx1	SINE/Alu	(0)	312	3	1503241
958	7.8	0.0	0.0	chr16	68254640	68254755	(22083590)	C	AluSz	SINE/Alu	(177)	135	20	1503242
12	27.1	0.0	3.9	chr16	68264971	68265022	(22073323)	+	(TGTGAC)n	Simple_repeat	1	52	(0)	1503254
1016	27.9	7.3	7.8	chr16	68842592	68842931	(21495414)	+	MER20B	DNA/hAT-Charlie	153	484	(299)	1504476
2370	9.0	0.0	0.0	chr16	68842932	68843232	(21495113)	C	AluSx4	SINE/Alu	(9)	301	1	1504477
1016	27.9	7.3	7.8	chr16	68843233	68843428	(21494917)	+	MER20B	DNA/hAT-Charlie	485	686	(97)	1504476
422	27.4	14.6	1.7	chr16	69407709	69408104	(20930241)	+	LTR79	LTR/ERVL	5	497	(30)	1505744
45	2.2	0.0	0.0	chr16	69408105	69408150	(20930195)	+	(TTAT)n	Simple_repeat	1	46	(0)	1505745
1488	11.7	0.0	0.5	chr16	69408151	69408355	(20929990)	C	AluSz6	SINE/Alu	(27)	285	82	1505746
261	17.3	0.0	0.0	chr16	71376436	71376487	(18961858)	C	MLT1L	LTR/ERVL-MaLR	(234)	376	325	1509576
679	21.6	11.0	2.5	chr16	73297690	73297888	(17040457)	+	MIRb	SINE/MIR	32	249	(19)	1512769
1797	18.2	0.0	1.9	chr16	73297905	73298211	(17040134)	+	AluJr4	SINE/Alu	3	303	(9)	1512770
2326	9.7	0.0	0.0	chr16	73478772	73479071	(16859274)	+	AluSx3	SINE/Alu	2	301	(10)	1513078
2556	32.7	9.1	3.6	chr16	74015329	74017223	(16321122)	C	ERVL-E-int	LTR/ERVL	(2255)	3459	1451	1513872
34	24.6	0.0	2.3	chr16	75234052	75234138	(15104207)	+	(CA)n	Simple_repeat	1	87	(0)	1516365
44	0.0	0.0	0.0	chr16	75234165	75234202	(15104143)	+	(AC)n	Simple_repeat	1	38	(0)	1516366
20981	7.5	0.3	0.4	chr16	76434234	76436927	(13901418)	C	HERVL-int	LTR/ERVL	(2963)	2691	1	1518372
2542	21.4	12.3	0.1	chr16	77223203	77223872	(13114473)	+	LTR41	LTR/ERVL	1	763	(5)	1519477
2290	9.5	0.0	0.3	chr16	77223928	77224252	(13114093)	C	AluSz	SINE/Alu	(0)	312	1	1519478
359	22.5	1.6	0.2	chr16	80716375	80717191	(9621154)	+	(TGGA)n	Simple_repeat	1	830	(0)	1525755
2451	5.8	3.2	0.0	chr16	81369596	81369869	(8968476)	C	AluYc	SINE/Alu	(16)	283	1	1527121
969	32.9	1.9	6.4	chr16	81369893	81370331	(8968014)	+	ERVL-E-int	LTR/ERVL	2346	2764	(2903)	1527120
805	23.4	6.3	4.2	chr16	81370345	81370618	(8967727)	C	LTR41C	LTR/ERVL	(0)	701	430	1527122
12	10.7	2.9	5.7	chr16	81582843	81582876	(8755469)	+	A-rich	Low_complexity	1	35	(0)	1527575
326	18.8	2.0	1.0	chr16	83967365	83968058	(6370287)	+	(GGAT)n	Simple_repeat	1	708	(0)	1531949
501	28.6	17.5	1.1	chr16	83990131	83990321	(6348024)	C	MIRb	SINE/MIR	(10)	258	30	1531986
481	25.2	7.2	4.3	chr16	83990711	83990872	(6347473)	+	MIR	SINE/MIR	66	232	(30)	1531987
2072	14.6	1.3	0.3	chr16	83990974	83991282	(6347063)	C	AluSz6	SINE/Alu	(0)	312	1	1531988
726	24.5	3.7	0.9	chr16	84930163	84930372	(5407973)	+	MER6A	DNA/TcMar-Tigger	27	242	(363)	1533856
253	12.6	2.1	7.0	chr16	84930376	84931001	(5407344)	+	(GTGTGG)n	Simple_repeat	1	639	(0)	1533857
50	0.0	0.0	0.0	chr16	85235429	85235471	(5102874)	+	(TG)n	Simple_repeat	1	43	(0)	1534454
50	33.5	1.8	1.3	chr16	85245870	85246089	(5092256)	+	(TG)n	Simple_repeat	1	224	(0)	1534483
140	15.2	2.7	2.9	chr16	85246201	85246501	(5091844)	+	(AC)n	Simple_repeat	1	309	(0)	1534484
1130	26.4	16.9	0.8	chr16	85418698	85419194	(4919151)	C	L2	LINE/L2	(616)	2803	2211	1534795
2107	14.8	2.2	0.0	chr16	85419331	85419635	(4918710)	+	AluJo	SINE/Alu	1	312	(0)	1534796
180	27.3	3.3	2.0	chr16	85522671	85523335	(4815010)	+	(GT)n	Simple_repeat	1	687	(0)	1535003
264	11.0	7.2	1.5	chr16	85572020	85572574	(4765771)	+	(AC)n	Simple_repeat	1	595	(0)	1535081
1494	21.6	7.8	1.4	chr16	86034338	86034769	(4303576)	+	MLT1C	LTR/ERVL-MaLR	6	467	(0)	1535913
469	33.3	2.7	2.0	chr16	86143599	86143745	(4194600)	+	MIRb	SINE/MIR	87	234	(34)	1536125
1002	33.6	1.6	2.1	chr16	86143862	86144298	(4194047)	+	LTR16C	LTR/ERVL	55	489	(0)	1536127
288	19.4	2.9	0.5	chr16	86464070	86464693	(3873652)	+	(GTGATG)n	Simple_repeat	1	642	(0)	1536715
106	25.1	0.7	1.1	chr16	86799382	86799654	(3538691)	+	(CAT)n	Simple_repeat	1	275	(0)	1537262
500	25.0	2.8	12.2	chr16	86897177	86897372	(3440973)	C	L2a	LINE/L2	(0)	3426	3250	1537434
11	20.1	2.9	0.0	chr16	86897677	86897710	(3440635)	+	(ACAGCC)n	Simple_repeat	1	35	(0)	1537435
266	30.4	4.7	2.8	chr16	86897786	86897914	(3440431)	C	MIRb	SINE/MIR	(128)	140	2	1537433
230	32.0	5.8	4.1	chr16	86897915	86898026	(3440319)	+	L2a	LINE/L2	3289	3426	(0)	1537436
296	14.8	7.1	3.2	chr16	86932146	86932981	(3405364)	+	(AGGTGTG)n	Simple_repeat	1	895	(0)	1537495
469	30.0	1.2	0.3	chr16	87187008	87188168	(3150177)	+	(GT)n	Simple_repeat	1	1174	(0)	1537970
2007	14.4	1.8	0.6	chr16	87193945	87194279	(3144066)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	1537985
1035	29.9	5.4	1.6	chr16	87194500	87194927	(3143418)	C	L1ME4b	LINE/L1	(284)	608	164	1537986
518	18.7	1.1	1.1	chr16	87221591	87222632	(3115713)	+	(ATCACC)n	Simple_repeat	1	1054	(0)	1538036
679	0.0	0.0	0.0	chr16	87384022	87384094	(2954251)	C	tRNA-Met_	tRNA	(3)	73	1	1538340
2307	4.6	4.7	0.7	chr17	793207	793491	(82463950)	+	AluY	SINE/Alu	1	297	(14)	1545799
2408	6.3	0.3	1.0	chr17	1258956	1259256	(81998185)	C	AluSx1	SINE/Alu	(13)	299	1	1546709
329	39.0	1.8	0.0	chr17	1311624	1311787	(81945654)	+	MER103C	DNA/hAT-Charlie	89	255	(42)	1546821
2243	10.1	1.0	0.0	chr17	1311993	1312288	(81945153)	C	AluSq2	SINE/Alu	(11)	302	4	1546822
2181	11.8	0.3	0.0	chr17	2484496	2484791	(80772650)	C	AluSq2	SINE/Alu	(14)	299	3	1549206
10463	10.7	1.3	0.0	chr17	4118054	4119530	(79137911)	C	HERVL-int	LTR/ERVL	(2034)	3620	2125	1552373
24	29.2	0.0	0.0	chr17	6274308	6274373	(76983068)	+	(ATC)n	Simple_repeat	1	66	(0)	1556738
86	7.4	4.0	5.2	chr17	6274382	6274605	(76982836)	+	(CAT)n	Simple_repeat	1	233	(0)	1556739
636	33.3	0.5	2.9	chr17	6274626	6274835	(76982606)	C	MIRb	SINE/MIR	(6)	262	58	1556740
769	11.6	0.0	3.6	chr17	6604991	6605102	(76652339)	+	FLAM_C	SINE/Alu	26	133	(10)	1557396
226	31.7	2.4	0.0	chr17	6605114	6605195	(76652246)	+	HAL1	LINE/L1	1692	1775	(732)	1557389
6411	22.7	1.4	2.7	chr17	6908654	6909984	(76347457)	C	L1PA13	LINE/L1	(5460)	1325	13	1557885
249	15.5	5.5	0.2	chr17	7113286	7113814	(76143627)	+	(AC)n	Simple_repeat	1	558	(0)	1558251
2347	4.2	0.0	1.8	chr17	7233445	7233729	(76023712)	C	AluSc8	SINE/Alu	(13)	298	19	1558479
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
2386	5.8	0.3	1.4	chr17	8093578	8093869	(75163572)	+	AluSp	SINE/Alu	1	289	(24)	1560077
56	0.0	0.0	0.0	chr17	8093871	8093920	(75163521)	+	(AATA)n	Simple_repeat	1	50	(0)	1560078
13	20.6	0.0	11.7	chr17	8122031	8122107	(75135334)	+	G-rich	Low_complexity	1	77	(0)	1560134
2390	6.6	3.5	1.0	chr17	8384034	8384050	(74873391)	C	AluSq	SINE/Alu	(0)	313	298	1560700
78	0.0	0.0	0.0	chr17	8384051	8384116	(74873325)	+	(GT)n	Simple_repeat	1	66	(0)	1560701
2390	6.6	3.5	1.0	chr17	8384117	8384403	(74873038)	C	AluSq	SINE/Alu	(16)	297	1	1560700
4208	16.6	5.9	5.8	chr17	8484514	8485463	(74771978)	+	L1MB8	LINE/L1	3670	4620	(1526)	1560896
205	37.4	0.9	0.9	chr17	9175530	9175645	(74081796)	C	MIR3	SINE/MIR	(7)	201	86	1562202
19	4.3	0.0	0.0	chr17	9515489	9515512	(73741929)	+	(TC)n	Simple_repeat	1	24	(0)	1562852
16	4.5	0.0	0.0	chr17	9515511	9515533	(73741908)	+	(TCAT)n	Simple_repeat	1	23	(0)	1562853
1903	15.9	0.0	0.3	chr17	9515534	9515822	(73741619)	C	AluJo	SINE/Alu	(23)	289	2	1562854
1170	28.0	9.2	3.4	chr17	15498033	15498439	(67759002)	C	MLT1J2	LTR/ERVL-MaLR	(15)	433	1	1573158
2175	8.4	0.0	0.0	chr17	16453009	16453281	(66804160)	+	AluSx4	SINE/Alu	1	273	(37)	1575011
43	10.0	0.0	0.0	chr17	16453298	16453363	(66804078)	+	(ACACAC)n	Simple_repeat	1	66	(0)	1575012
222	32.1	7.7	2.3	chr17	16453476	16453561	(66803880)	+	MIRc	SINE/MIR	119	209	(59)	1575013
740	28.8	3.2	6.5	chr17	16453607	16453678	(66803763)	C	MIR	SINE/MIR	(1)	261	199	1575014
2011	15.2	16.2	24.6	chr17	16453679	16454108	(66803333)	+	MER39	LTR/ERV1	3	538	(169)	1575015
265	17.9	0.2	0.6	chr17	16456019	16456506	(66800935)	+	GA-rich	Low_complexity	1	489	(0)	1575021
287	33.5	0.3	0.1	chr17	17041669	17041789	(66215652)	+	MIRb	SINE/MIR	60	181	(87)	1576013
258	17.4	0.0	0.0	chr17	17041885	17041930	(66215511)	+	MIR	SINE/MIR	107	152	(110)	1576014
184	16.1	0.0	0.0	chr17	17042008	17042038	(66215403)	+	L2a	LINE/L2	3326	3356	(19)	1576012
2320	6.0	0.3	2.7	chr17	17237824	17238123	(66019318)	C	AluSq	SINE/Alu	(20)	293	1	1576234
1101	16.4	0.0	0.0	chr17	17734292	17734456	(65522985)	+	AluJb	SINE/Alu	131	295	(17)	1577248
386	30.4	1.2	12.0	chr17	17734973	17735056	(65522385)	+	L3	LINE/CR1	3820	3894	(205)	1577249
2301	10.1	0.0	0.3	chr17	17735057	17735353	(65522088)	C	AluSx1	SINE/Alu	(16)	296	1	1577250
316	24.5	19.4	4.4	chr17	19255181	19255428	(64002013)	+	L4_A_Mam	LINE/RTE-X	4610	4903	(87)	1580288
54	0.0	0.0	1.9	chr17	19255431	19255483	(64001958)	+	(ATTT)n	Simple_repeat	1	53	(0)	1580289
218	22.4	0.0	7.5	chr17	19255511	19255563	(64001878)	+	MER5B	DNA/hAT-Charlie	1	49	(129)	1580290
17	0.0	0.0	0.0	chr17	19255564	19255582	(64001859)	+	(T)n	Simple_repeat	1	19	(0)	1580291
1727	17.4	0.7	1.1	chr17	19255632	19255912	(64001529)	C	AluJr	SINE/Alu	(22)	290	11	1580292
2210	11.6	0.3	0.0	chr17	19569090	19569381	(63688060)	+	AluSz6	SINE/Alu	1	293	(19)	1580877
225	21.9	3.0	4.5	chr17	19569640	19569706	(63687735)	+	MER5A	DNA/hAT-Charlie	38	103	(86)	1580878
13	17.4	0.0	2.9	chr17	19648298	19648331	(63609110)	+	GA-rich	Low_complexity	1	34	(0)	1581022
432	24.9	8.2	0.6	chr17	21127961	21128130	(62129311)	C	MIR	SINE/MIR	(0)	262	79	1583715
758	19.6	13.2	0.5	chr17	29252988	29253192	(54004249)	C	L1ME2	LINE/L1	(8)	6156	5922	1590221
15	21.1	2.9	0.0	chr17	29253262	29253295	(54004146)	+	(AC)n	Simple_repeat	1	35	(0)	1590222
41	32.5	0.0	0.0	chr17	29293893	29294029	(53963412)	+	(TGG)n	Simple_repeat	1	137	(0)	1590288
325	30.3	10.9	3.7	chr17	29592177	29592337	(53665104)	C	MIRb	SINE/MIR	(73)	195	22	1590974
1601	23.6	11.9	7.4	chr17	29936469	29936674	(53320767)	C	LTR50	LTR/ERVL	(577)	218	2	1591644
3238	28.3	3.4	4.0	chr17	29936703	29937188	(53320253)	C	ERVL-E-int	LTR/ERVL	(2904)	2763	2274	1591646
2363	8.4	2.9	0.0	chr17	29937189	29937486	(53319955)	C	AluSx	SINE/Alu	(5)	307	1	1591647
288	29.1	2.2	4.3	chr17	30727431	30727570	(52529871)	C	L2	LINE/L2	(779)	2640	2504	1593138
224	19.5	3.5	4.7	chr17	30727828	30727913	(52529528)	C	MIR3	SINE/MIR	(77)	131	47	1593139
1333	10.1	10.3	15.0	chr17	30727959	30728130	(52529311)	C	AluJo	SINE/Alu	(13)	299	123	1593140
2467	6.5	0.0	0.0	chr17	30728131	30728424	(52529017)	+	AluSc	SINE/Alu	1	294	(15)	1593141
15330	15.2	4.8	2.7	chr17	31129729	31131601	(52125840)	C	L1PA13	LINE/L1	(4831)	1954	1	1594063
212	20.5	0.0	4.3	chr17	31936157	31936202	(51321239)	C	MIR3	SINE/MIR	(17)	191	148	1595690
2384	7.1	0.0	0.3	chr17	31936291	31936586	(51320855)	+	AluSx3	SINE/Alu	1	295	(16)	1595691
1728	16.5	6.5	0.0	chr17	32371467	32371739	(50885702)	+	AluJo	SINE/Alu	1	292	(20)	1596662
2537	8.2	0.0	0.0	chr17	32372019	32372311	(50885130)	+	AluY	SINE/Alu	1	293	(18)	1596663
21	7.6	0.0	0.0	chr17	34613147	34613174	(48644267)	+	(CT)n	Simple_repeat	1	28	(0)	1600741
39	2.7	0.0	0.0	chr17	34613175	34613212	(48644229)	+	(AC)n	Simple_repeat	1	38	(0)	1600742
2426	7.1	0.0	0.3	chr17	35420927	35421209	(47836232)	+	AluSx1	SINE/Alu	2	283	(29)	1602191
54	0.0	0.0	0.0	chr17	35421210	35421258	(47836183)	+	(AAAT)n	Simple_repeat	1	49	(0)	1602192
2209	8.2	0.7	0.0	chr17	35567234	35567514	(47689927)	+	AluSx1	SINE/Alu	1	283	(29)	1602409
47	0.0	0.0	0.0	chr17	35567518	35567560	(47689881)	+	(AAAT)n	Simple_repeat	1	43	(0)	1602410
1206	12.3	0.0	0.6	chr17	35567561	35567731	(47689710)	+	AluSx	SINE/Alu	133	302	(10)	1602411
2360	8.9	0.0	2.9	chr17	35954476	35954791	(47302650)	+	AluY	SINE/Alu	1	307	(4)	1603142
6300	11.6	1.6	2.7	chr17	35954792	35955366	(47302075)	C	Tigger1	DNA/TcMar-Tigger	(877)	1541	963	1603141
6974	12.4	1.7	3.5	chr17	36111840	36113213	(47144228)	+	HERVL-int	LTR/ERVL	1	1352	(4405)	1603423
17706	5.8	1.6	0.0	chr17	36113212	36115348	(47142093)	+	HERVL-int	LTR/ERVL	2491	4663	(991)	1603423
585	29.7	4.3	1.3	chr17	36131698	36131922	(47125519)	+	LTR79	LTR/ERVL	288	519	(8)	1603439
920	34.5	3.5	2.6	chr17	36131939	36132358	(47125083)	+	ERVL-B4-int	LTR/ERVL	2365	2788	(2879)	1603440
1911	17.4	0.0	0.4	chr17	37001037	37001312	(46256129)	+	AluJo	SINE/Alu	1	275	(37)	1605077
36	12.3	4.7	0.0	chr17	37001319	37001382	(46256059)	+	GA-rich	Low_complexity	1	67	(0)	1605078
56	0.0	0.0	0.0	chr17	37001406	37001455	(46255986)	+	(AGGA)n	Simple_repeat	1	50	(0)	1605079
6940	15.1	2.8	4.0	chr17	37001473	37001920	(46255521)	+	L1M4	LINE/L1	3770	4241	(1905)	1605076
2743	7.6	0.3	0.0	chr17	37457923	37458277	(45799164)	C	L1PA13	LINE/L1	(3)	6160	5805	1605917
2219	10.5	0.0	0.3	chr17	38666956	38667240	(44590201)	+	AluSz	SINE/Alu	1	284	(28)	1608314
56	0.0	0.0	0.0	chr17	38667241	38667290	(44590151)	+	(AAAT)n	Simple_repeat	1	50	(0)	1608315
468	25.2	5.0	5.6	chr17	38667291	38667392	(44590049)	+	MIR	SINE/MIR	155	260	(2)	1608313
546	23.5	14.5	0.7	chr17	38667413	38667566	(44589875)	+	MIRb	SINE/MIR	43	221	(47)	1608316
416	23.5	3.6	9.7	chr17	38826382	38826447	(44430994)	C	L1M5	LINE/L1	(1690)	4456	4390	1608653
2014	11.4	0.0	0.0	chr17	38826448	38826769	(44430672)	C	AluSx	SINE/Alu	(0)	312	21	1608654
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
16	10.7	7.1	2.2	chr17	39981111	39981152	(43276289)	+	(GACGGCA)n	Simple_repeat	1	45	(0)	1611121
106	1.8	3.5	0.0	chr17	40140318	40140430	(43117011)	+	(AC)n	Simple_repeat	1	117	(0)	1611417
12	25.1	4.3	0.0	chr17	40332238	40332284	(42925157)	+	(GGCCGG)n	Simple_repeat	1	49	(0)	1611834
2296	6.9	0.7	0.7	chr17	40544478	40544768	(42712673)	+	AluY	SINE/Alu	19	309	(2)	1612280
1014	9.4	7.4	0.0	chr17	40544769	40544943	(42712498)	+	AluSx	SINE/Alu	134	312	(0)	1612281
2456	7.5	1.0	0.3	chr17	40545002	40545309	(42712132)	+	AluY	SINE/Alu	1	310	(1)	1612282
3228	28.8	5.2	1.7	chr17	41020103	41021229	(42236212)	C	ERVL-E-int	LTR/ERVL	(2626)	3041	1873	1613030
238	30.2	4.5	1.9	chr17	41145772	41145879	(42111562)	C	L1M5	LINE/L1	(1217)	4929	4819	1613192
551	15.5	4.8	2.0	chr17	41632551	41633816	(41623625)	+	(GT)n	Simple_repeat	1	1327	(0)	1613928
156	23.5	2.0	2.4	chr17	41651910	41652352	(41605089)	+	(AC)n	Simple_repeat	1	452	(0)	1613961
184	4.2	4.0	4.5	chr17	42221893	42222215	(41035226)	+	(TG)n	Simple_repeat	1	336	(0)	1615176
54	0.0	0.0	0.0	chr17	43545935	43545980	(39711461)	+	(GT)n	Simple_repeat	1	46	(0)	1618071
282	23.3	1.6	1.3	chr17	43860878	43860994	(39396447)	C	MIR3	SINE/MIR	(57)	173	66	1618748
393	31.4	1.1	9.0	chr17	44741892	44741965	(38515476)	+	MER5A	DNA/hAT-Charlie	7	75	(114)	1620631
1682	15.6	0.0	8.3	chr17	44741966	44742121	(38515320)	+	AluJr	SINE/Alu	2	134	(178)	1620632
48	22.8	1.8	0.0	chr17	45127720	45127831	(38129610)	+	(GT)n	Simple_repeat	1	114	(0)	1621401
2446	11.0	0.0	0.0	chr17	45884334	45884643	(37372798)	C	AluSx	SINE/Alu	(1)	311	2	1622975
1298	26.4	4.6	9.3	chr17	45884644	45884810	(37372631)	C	LTR41B	LTR/ERVL	(598)	160	1	1622974
1094	30.1	10.0	2.2	chr17	45884811	45885271	(37372170)	C	HERV16-int	LTR/ERVL	(2323)	2673	2173	1622976
50	0.0	0.0	0.0	chr17	45895049	45895091	(37362350)	+	(GT)n	Simple_repeat	1	43	(0)	1622997
61	0.0	0.0	0.0	chr17	46852390	46852441	(36405000)	+	(GT)n	Simple_repeat	1	52	(0)	1624849
53	2.0	0.0	0.0	chr17	47706829	47706878	(35550563)	+	(AC)n	Simple_repeat	1	50	(0)	1626590
280	22.2	0.0	1.5	chr17	48671258	48671329	(34586112)	+	MIR	SINE/MIR	196	262	(0)	1628240
44	0.0	0.0	0.0	chr17	48671330	48671369	(34586072)	+	(TTTA)n	Simple_repeat	1	40	(0)	1628241
2312	3.4	3.9	0.0	chr17	48671384	48671651	(34585790)	C	AluY	SINE/Alu	(32)	279	1	1628242
94	7.2	4.1	0.0	chr17	48728854	48728999	(34528442)	+	(TC)n	Simple_repeat	1	152	(0)	1628367
12	24.0	4.5	0.0	chr17	48729085	48729128	(34528313)	+	GA-rich	Low_complexity	1	46	(0)	1628368
2235	10.9	0.0	0.0	chr17	49136519	49136846	(34120595)	C	AluSq2	SINE/Alu	(0)	313	1	1629285
37	0.0	0.0	0.0	chr17	50169415	50169446	(33087995)	+	(AC)n	Simple_repeat	1	32	(0)	1631273
276	25.0	3.5	3.5	chr17	51153888	51153974	(32103467)	+	L2c	LINE/L2	3299	3385	(2)	1633249
27586	15.6	3.8	4.9	chr17	56563287	56566057	(26691384)	+	ERVL-int	LTR/ERVL	990	3760	(1997)	1641493
308	21.2	0.0	5.9	chr17	57273214	57273298	(25984143)	+	MER124	DNA?	155	234	(163)	1643001
18	4.8	0.0	0.0	chr17	57273465	57273486	(25983955)	+	(T)n	Simple_repeat	1	22	(0)	1643002
232	29.4	7.8	5.6	chr17	59111107	59111232	(24146209)	C	MIRb	SINE/MIR	(138)	130	2	1646454
314	34.4	5.4	0.6	chr17	59111282	59111439	(24146002)	C	L1M5	LINE/L1	(304)	5820	5655	1646455
2039	10.4	0.0	0.0	chr17	61552108	61552367	(21705074)	C	AluSc	SINE/Alu	(33)	276	17	1651239
2474	6.6	1.0	0.7	chr17	61552464	61552766	(21704675)	C	AluY	SINE/Alu	(7)	304	1	1651240
986	16.6	0.4	1.3	chr17	62792479	62794320	(20463121)	+	(CAC)n	Simple_repeat	1	1850	(0)	1653697
13	21.5	0.0	4.8	chr17	63842651	63842692	(19414749)	+	(CCCGC)n	Simple_repeat	1	42	(0)	1655439
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
280	22.2	0.0	0.0	chr17	63966904	63966957	(19290484)	+	Zaphod2	DNA/hAT-Tip100	3467	3520	(4)	1655662
15	33.3	1.2	3.7	chr17	63966958	63967037	(19290404)	+	(TG)n	Simple_repeat	1	81	(0)	1655663
388	29.9	10.5	3.9	chr17	63967119	63967157	(19290284)	C	MIRc	SINE/MIR	(3)	265	232	1655664
2318	9.5	0.0	0.0	chr17	63967158	63967451	(19289990)	C	AluSq2	SINE/Alu	(18)	295	2	1655665
386	30.1	13.5	5.7	chr17	66200569	66200744	(17056697)	+	MIRb	SINE/MIR	59	250	(18)	1659822
258	26.7	1.3	0.0	chr17	66200765	66200839	(17056602)	+	L3	LINE/CR1	2801	2876	(1223)	1659823
15	18.6	0.0	0.0	chr17	66200840	66200860	(17056581)	+	(CATGTG)n	Simple_repeat	1	21	(0)	1659824
31	3.3	0.0	0.0	chr17	66200861	66200891	(17056550)	+	(AC)n	Simple_repeat	1	31	(0)	1659825
15	18.6	0.0	0.0	chr17	66200892	66200907	(17056534)	+	(CATGTG)n	Simple_repeat	4	19	(0)	1659826
40	31.3	2.5	1.2	chr17	66200906	66201063	(17056378)	+	(CA)n	Simple_repeat	1	162	(0)	1659827
2376	9.9	0.3	0.0	chr17	67844741	67845042	(15412399)	C	AluSp	SINE/Alu	(10)	303	1	1662947
1038	24.1	9.9	2.8	chr17	67845043	67845424	(15412017)	C	L1MC4	LINE/L1	(537)	7505	7090	1662946
546	31.6	6.4	5.1	chr17	68579030	68579550	(14677891)	+	MamGypLTR1b	LTR/Gypsy	195	772	(10)	1664436
758	28.3	9.8	2.5	chr17	68579571	68579950	(14677491)	C	MLT1I	LTR/ERVL-MaLR	(6)	405	1	1664438
2452	18.0	5.6	1.6	chr17	70910820	70911667	(12345774)	+	L1MA4A	LINE/L1	5214	6142	(41)	1667982
2226	12.0	0.0	0.0	chr17	70911668	70911959	(12345482)	+	AluSc	SINE/Alu	1	292	(17)	1667984
748	30.3	8.2	7.5	chr17	71626836	71627347	(11630094)	+	L1ME1	LINE/L1	369	903	(5497)	1669081
60	0.0	0.0	0.0	chr17	73310744	73310794	(9946647)	+	(CA)n	Simple_repeat	1	51	(0)	1672050
27	0.0	0.0	0.0	chr17	74076100	74076125	(9181316)	+	(TGATGG)n	Simple_repeat	1	26	(0)	1673456
237	32.8	0.1	0.3	chr17	74076136	74076852	(9180589)	+	(TGG)n	Simple_repeat	1	718	(0)	1673457
96	17.4	1.9	2.3	chr17	74389858	74390067	(8867374)	+	(CCTT)n	Simple_repeat	1	214	(0)	1674061
313	36.5	11.1	2.3	chr17	74390075	74390581	(8866860)	C	HAL1	LINE/L1	(1219)	1288	880	1674062
58	30.2	1.8	9.6	chr17	74514143	74514815	(8742626)	+	(TGACAGG)n	Simple_repeat	1	685	(0)	1674300
355	18.0	4.8	2.6	chr17	74568410	74569350	(8688091)	+	(TG)n	Simple_repeat	1	986	(0)	1674386
1097	31.1	6.1	1.5	chr17	74594885	74595386	(8662055)	C	HERV16-int	LTR/ERVL	(2073)	2923	2265	1674430
62	0.0	0.0	1.7	chr17	74595387	74595446	(8661995)	+	(TTTGT)n	Simple_repeat	1	60	(0)	1674431
1671	15.8	2.1	3.5	chr17	74595447	74595730	(8661711)	C	AluJo	SINE/Alu	(30)	282	3	1674432
2184	12.5	0.0	0.7	chr17	76119842	76120137	(7137304)	C	AluSx1	SINE/Alu	(18)	294	1	1677423
265	26.6	38.4	3.1	chr17	76120460	76120645	(7136796)	+	MIR3	SINE/MIR	2	254	(8)	1677424
8760	15.8	7.2	3.9	chr17	76613942	76615466	(6641975)	C	LTR12C	LTR/ERV1	(0)	1579	2	1678387
474	28.2	19.2	0.3	chr17	76641393	76642004	(6615437)	+	L1ME3G	LINE/L1	1	740	(184)	1678444
238	23.8	0.0	16.5	chr17	77234120	77234240	(6023201)	C	L2a	LINE/L2	(469)	2950	2850	1679690
360	28.8	0.9	0.8	chr17	77509083	77510098	(5747343)	+	(ATC)n	Simple_repeat	1	1025	(0)	1680149
369	37.8	8.8	1.6	chr17	77765045	77765351	(5492090)	+	L2b	LINE/L2	3045	3375	(0)	1680602
52	32.1	0.5	2.0	chr17	77765354	77765458	(5491983)	+	(ATGG)n	Simple_repeat	1	104	(0)	1680603
79	7.3	0.0	0.0	chr17	77765459	77765559	(5491882)	+	(TGGA)n	Simple_repeat	1	101	(0)	1680604
52	32.1	0.5	2.0	chr17	77765560	77765647	(5491794)	+	(ATGG)n	Simple_repeat	1	87	(0)	1680605
206	27.1	0.2	0.2	chr17	77809785	77810280	(5447161)	+	(TGATGA)n	Simple_repeat	1	497	(0)	1680683
102	18.5	2.8	0.0	chr17	78290011	78290224	(4967217)	+	(GT)n	Simple_repeat	1	220	(0)	1681578
293	35.4	3.3	0.7	chr17	78861309	78861456	(4395985)	+	L2c	LINE/L2	3226	3377	(10)	1682580
1173	8.6	0.0	0.0	chr17	78912923	78913073	(4344368)	+	AluSx	SINE/Alu	1	151	(161)	1682673
597	17.1	5.4	0.0	chr17	78913312	78913416	(4344025)	+	L1MB7	LINE/L1	6060	6170	(14)	1682674
2045	17.9	0.0	0.0	chr17	78913429	78913740	(4343701)	+	AluJb	SINE/Alu	1	312	(0)	1682675
274	28.3	3.9	4.8	chr17	79135947	79136050	(4121391)	C	L3b	LINE/CR1	(207)	5025	4923	1683037
2422	35.2	6.5	4.8	chr17	79203936	79206370	(4051071)	+	ERVL-B4-int	LTR/ERVL	531	3107	(2607)	1683125
371	32.9	7.0	8.9	chr17	79559015	79559261	(3698180)	+	L2b	LINE/L2	3134	3375	(0)	1683587
285	23.5	4.4	0.8	chr17	79559285	79560086	(3697355)	+	(ATGG)n	Simple_repeat	1	837	(0)	1683588
32	28.6	0.8	3.2	chr17	79839588	79839712	(3417729)	+	G-rich	Low_complexity	1	126	(0)	1684014
13	11.5	2.2	8.7	chr17	79840255	79840299	(3417142)	+	(AGGCGAG)n	Simple_repeat	1	46	(0)	1684015
1376	26.5	12.4	3.4	chr17	79904359	79904803	(3352638)	C	ERV3-16A3_I-int	LTR/ERVL	(2165)	2831	2240	1684139
20	24.4	0.0	0.0	chr17	79939962	79940011	(3317430)	+	(CACG)n	Simple_repeat	1	50	(0)	1684198
14	14.6	0.0	8.9	chr17	80109786	80109830	(3147611)	+	(CAGG)n	Simple_repeat	1	45	(0)	1684474
5853	13.4	14.2	2.0	chr17	80155121	80156202	(3101239)	+	MER11B	LTR/ERVK	1	1236	(0)	1684551
235	27.3	0.5	0.0	chr17	80980487	80981089	(2276352)	+	(GAGT)n	Simple_repeat	1	606	(0)	1685730
168	34.2	0.7	0.5	chr17	81169756	81170360	(2087081)	+	(GT)n	Simple_repeat	1	609	(0)	1685942
677	17.9	7.5	1.1	chr17	81170361	81170546	(2086895)	C	MLT1C	LTR/ERVL-MaLR	(262)	205	7	1685941
659	22.5	4.4	1.7	chr17	81792544	81793663	(1463778)	+	(CA)n	Simple_repeat	1	1175	(0)	1686733
88	26.3	5.1	1.9	chr17	82717850	82718204	(539237)	+	(GT)n	Simple_repeat	1	373	(0)	1688137
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
257	32.5	2.5	3.3	chr18	1528408	1528528	(78844757)	C	MER5A	DNA/hAT-Charlie	(69)	120	1	1691485
70	18.4	0.0	3.2	chr18	1528579	1528733	(78844552)	+	(ATGTGT)n	Simple_repeat	1	155	(0)	1691486
802	28.6	8.5	4.6	chr18	1528791	1529138	(78844147)	C	L2a	LINE/L2	(0)	3426	3064	1691487
47120	5.9	0.5	0.0	chr18	2833273	2838897	(77534388)	C	HERVL-int	LTR/ERVL	(0)	5654	1	1693359
90	32.7	0.0	0.7	chr18	6729310	6729597	(73643688)	+	(AC)n	Simple_repeat	1	288	(0)	1698977
191	18.9	5.4	0.0	chr18	7325403	7325455	(73047830)	C	L2a	LINE/L2	(2)	3424	3369	1699909
1518	26.8	6.4	5.6	chr18	7325489	7325941	(73047344)	C	L2a	LINE/L2	(126)	3300	2815	1699909
7617	22.9	6.1	1.7	chr18	10094867	10096649	(70276636)	+	ERVL-E-int	LTR/ERVL	1776	3638	(2029)	1704127
33280	8.9	1.8	0.3	chr18	11127866	11133402	(69239883)	+	HERVL-int	LTR/ERVL	1	5654	(0)	1705453
34453	6.0	2.3	1.4	chr18	12758006	12759577	(67613708)	C	HERVL-int	LTR/ERVL	(2756)	2898	1317	1708074
3391	26.3	5.5	1.6	chr18	12768273	12769946	(67603339)	+	ERVL-E-int	LTR/ERVL	864	2700	(3014)	1708095
3256	21.2	8.6	0.4	chr18	12770027	12770774	(67602511)	+	ERVL-E-int	LTR/ERVL	2738	3552	(2115)	1708095
231	30.1	6.3	6.9	chr18	13295896	13296070	(67077215)	C	MIR3	SINE/MIR	(7)	201	28	1708913
1149	25.4	1.7	2.3	chr18	13296297	13296598	(67076687)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	91	1708914
448	24.6	0.6	0.4	chr18	13822909	13823988	(66549297)	+	(CAAC)n	Simple_repeat	1	1086	(0)	1709568
120	24.3	2.4	5.3	chr18	23411129	23411554	(56961731)	+	GA-rich	Low_complexity	1	436	(0)	1716141
974	19.2	3.1	0.9	chr18	24187201	24187421	(56185864)	+	L1MB3	LINE/L1	5957	6182	(1)	1717501
658	31.1	9.5	0.0	chr18	24187430	24187648	(56185637)	+	MIR	SINE/MIR	20	261	(1)	1717502
13	9.3	0.0	0.0	chr18	24426263	24426285	(55947000)	+	(AAAC)n	Simple_repeat	1	23	(0)	1717928
21044	14.8	2.7	1.3	chr18	24772409	24775733	(55597552)	C	ERVL-B4-int	LTR/ERVL	(8)	5706	2334	1718448
15	5.6	0.0	0.0	chr18	25350621	25350639	(55022646)	+	(TC)n	Simple_repeat	1	19	(0)	1719209
14	31.2	1.7	0.0	chr18	25350778	25350836	(55022449)	+	(CGCA)n	Simple_repeat	1	60	(0)	1719210
822	19.1	22.5	0.0	chr18	25412896	25413146	(54960139)	C	MER33	DNA/hAT-Charlie	(0)	324	1	1719301
212	28.4	38.8	6.7	chr18	25413147	25413288	(54959997)	C	L2b	LINE/L2	(362)	3013	2826	1719300
225	30.2	0.0	2.3	chr18	31149887	31149974	(49223311)	+	LTR79	LTR/ERVL	403	488	(39)	1727278
295	24.0	0.8	0.1	chr18	31149999	31150654	(49222631)	+	(CAC)n	Simple_repeat	1	661	(0)	1727279
255	32.1	0.0	0.0	chr18	32502265	32502348	(47870937)	+	ERVL-int	LTR/ERVL	2370	2453	(3214)	1729449
278	28.6	0.0	6.7	chr18	32502450	32502554	(47870731)	C	LTR16A	LTR/ERVL	(1)	450	353	1729450
5306	31.7	7.1	2.8	chr18	33797016	33798448	(46574837)	C	ERVL-E-int	LTR/ERVL	(2408)	3246	1611	1731144
192	20.0	0.0	0.0	chr18	35290721	35290755	(45082530)	+	MamRTE1	LINE/RTE-BovB	3771	3805	(7)	1733113
44246	7.3	1.8	0.1	chr18	35855492	35861049	(44512236)	+	HERVL-int	LTR/ERVL	1	5654	(0)	1733899
22035	7.1	0.7	0.3	chr18	37877261	37879995	(42493290)	+	HERVL-int	LTR/ERVL	1	2747	(2907)	1736636
10062	7.5	1.7	1.2	chr18	37879995	37880591	(42492694)	+	HERVL-int	LTR/ERVL	4345	4960	(694)	1736636
41716	9.3	0.5	0.1	chr18	43494453	43500000	(36873285)	+	HERVL-int	LTR/ERVL	4	5572	(82)	1744285
3599	30.9	7.4	5.6	chr18	44633810	44635050	(35738235)	C	ERVL-E-int	LTR/ERVL	(2770)	2897	1647	1745739
2188	12.8	0.0	0.3	chr18	45826911	45827214	(34546071)	C	AluSz6	SINE/Alu	(8)	304	2	1747482
333	34.3	0.0	0.0	chr18	46451121	46451225	(33922060)	C	L4_A_Mam	LINE/RTE-X	(866)	4124	4020	1748677
342	35.0	0.0	0.0	chr18	46451226	46451345	(33921940)	+	MER5B	DNA/hAT-Charlie	1	120	(58)	1748678
19963	10.5	3.4	1.1	chr18	46779152	46782323	(33590962)	+	HERVL-int	LTR/ERVL	2196	5654	(0)	1749243
1983	16.8	4.8	1.2	chr18	47184747	47185090	(33188195)	+	LTR18A	LTR/ERVL	1	357	(0)	1749819
1650	29.4	7.4	0.7	chr18	47434178	47434731	(32938554)	+	ERVL-E-int	LTR/ERVL	2187	2780	(2887)	1750193
283	25.0	0.0	0.0	chr18	48314402	48314465	(32058820)	+	MER20	DNA/hAT-Charlie	17	80	(139)	1751688
11	27.7	0.0	0.0	chr18	48314769	48314807	(32058478)	+	(AGGCTGC)n	Simple_repeat	1	39	(0)	1751689
7082	6.1	1.3	0.0	chr18	48433846	48434926	(31938359)	+	L1PA7	LINE/L1	5061	6152	(2)	1751914
501	19.0	0.5	0.6	chr18	48602775	48603744	(31769541)	+	(ATGG)n	Simple_repeat	1	975	(0)	1752182
422	27.2	11.0	1.4	chr18	48873578	48873725	(31499560)	+	MIR1_Amn	SINE/MIR	14	172	(36)	1752571
48	0.0	0.0	0.0	chr18	48873738	48873781	(31499504)	+	(ATTT)n	Simple_repeat	1	44	(0)	1752572
2265	9.2	0.0	0.0	chr18	48873782	48874065	(31499220)	C	AluSq2	SINE/Alu	(29)	284	1	1752573
201	25.5	17.4	1.2	chr18	48900914	48901076	(31472209)	+	L2a	LINE/L2	3183	3377	(10)	1752628
233	26.1	4.2	1.4	chr18	48901049	48901118	(31472167)	C	L2c	LINE/L2	(1)	3386	3315	1752629
218	20.0	0.0	2.2	chr18	48901124	48901169	(31472116)	+	L2a	LINE/L2	3369	3413	(13)	1752628
29	33.2	1.5	1.5	chr18	48901175	48901261	(31472024)	+	(GGAT)n	Simple_repeat	1	86	(0)	1752630
71	4.8	3.5	2.6	chr18	48901262	48901374	(31471911)	+	(TGGA)n	Simple_repeat	1	117	(0)	1752631
29	33.2	1.5	1.5	chr18	48901375	48901416	(31471869)	+	(GGAT)n	Simple_repeat	3	45	(0)	1752632
659	23.8	6.1	3.1	chr18	48904866	48905056	(31468229)	+	MamTip3	DNA/hAT-Tip100	173	369	(131)	1752639
139	9.5	2.6	1.3	chr18	48905091	48905320	(31467965)	+	(GAAG)n	Simple_repeat	1	236	(0)	1752640
1066	27.9	8.9	1.9	chr18	48905321	48905748	(31467537)	+	HAL1	LINE/L1	1687	2147	(360)	1752641
44	2.4	0.0	0.0	chr18	49017086	49017127	(31356158)	+	(GT)n	Simple_repeat	1	42	(0)	1752841
165	25.1	2.2	2.0	chr18	49019546	49020039	(31353246)	+	(GT)n	Simple_repeat	1	505	(0)	1752844
182	37.6	5.2	2.7	chr18	49582879	49582990	(30790295)	C	L2a	LINE/L2	(17)	3409	3295	1753840
770	32.7	8.1	2.1	chr18	49812238	49812749	(30560536)	+	L2	LINE/L2	2367	2911	(508)	1754247
36847	13.7	2.2	0.4	chr18	51230286	51233181	(29140104)	C	HERVL-int	LTR/ERVL	(2694)	2960	2	1756584
2160	11.1	5.8	3.4	chr18	58233257	58233611	(22139674)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1767005
258	23.2	0.0	2.8	chr18	58233613	58233683	(22139602)	+	MER46C	DNA/TcMar-Tigger	258	326	(12)	1767006
1163	22.7	7.1	3.5	chr18	58233698	58234035	(22139250)	C	MLT1C	LTR/ERVL-MaLR	(1)	466	116	1767007
342	11.6	7.0	0.9	chr18	58512579	58513281	(21860004)	+	(TG)n	Simple_repeat	1	752	(0)	1767364
60	22.2	6.5	2.2	chr18	58781776	58781990	(21591295)	+	(TG)n	Simple_repeat	1	229	(0)	1767840
11789	28.2	3.6	3.1	chr18	59127695	59131245	(21242040)	C	ERVL-E-int	LTR/ERVL	(309)	5358	1789	1768494
8325	29.4	3.3	2.7	chr18	59189488	59192081	(21181204)	C	ERVL-E-int	LTR/ERVL	(1850)	3817	1208	1768578
325	11.0	8.5	2.9	chr18	63103239	63104046	(17269239)	+	(TG)n	Simple_repeat	1	877	(0)	1774564
739	21.3	1.2	0.4	chr18	63198160	63199782	(17173503)	+	(AC)n	Simple_repeat	1	1643	(0)	1774698
13	26.1	0.0	0.0	chr18	63320591	63320631	(17052654)	+	G-rich	Low_complexity	1	41	(0)	1774869
43	4.2	2.0	0.0	chr18	63320691	63320739	(17052546)	+	(GT)n	Simple_repeat	1	50	(0)	1774870
25464	10.4	0.7	2.3	chr18	64535030	64536241	(15837044)	C	HERVL-int	LTR/ERVL	(2333)	3321	2119	1776604
28301	6.8	2.3	0.0	chr18	69973064	69976589	(10396696)	C	HERVL-int	LTR/ERVL	(0)	5654	2048	1783936
11534	13.3	2.9	2.2	chr18	80021997	80023821	(349464)	C	LTR25-int	LTR/ERV1	(4813)	2375	539	1796043
16	9.6	0.0	0.0	chr19	485197	485219	(58132397)	+	(AC)n	Simple_repeat	1	23	(0)	1797003
2288	9.1	2.6	0.0	chr19	732930	733225	(57884391)	C	AluSq2	SINE/Alu	(9)	304	1	1797483
238	30.3	11.6	0.8	chr19	733360	733482	(57884134)	C	L2b	LINE/L2	(283)	3092	2955	1797474
265	36.0	11.2	1.3	chr19	1075904	1076215	(57541401)	C	L1MC4a	LINE/L1	(1940)	5942	5596	1798185
238	23.9	0.0	9.9	chr19	1076243	1076363	(57541253)	C	L1ME4b	LINE/L1	(783)	109	1	1798186
2051	12.4	0.0	0.3	chr19	1076484	1076795	(57540821)	C	AluSx1	SINE/Alu	(0)	312	2	1798187
381	32.6	7.5	3.5	chr19	1563416	1563644	(57053972)	C	L2b	LINE/L2	(0)	3375	3137	1799030
314	33.9	8.6	2.0	chr19	1563777	1563809	(57053807)	+	MIR	SINE/MIR	39	69	(193)	1799031
1694	14.6	1.9	1.9	chr19	1563810	1564076	(57053540)	C	AluJb	SINE/Alu	(14)	298	32	1799032
74	22.8	1.1	1.6	chr19	1936457	1936640	(56680976)	+	GA-rich	Low_complexity	1	186	(0)	1799796
288	21.3	3.9	3.9	chr19	1936642	1936846	(56680770)	+	HERVIP10FH-int	LTR/ERV1	780	984	(4118)	1799797
297	17.3	0.0	0.0	chr19	1936853	1936904	(56680712)	+	Alu	SINE/Alu	245	296	(5)	1799798
38	19.2	2.4	1.1	chr19	1936908	1936992	(56680624)	+	GA-rich	Low_complexity	1	87	(0)	1799799
2290	8.7	0.0	0.0	chr19	2163085	2163373	(56454243)	C	AluSx1	SINE/Alu	(23)	289	1	1800270
957	6.9	0.0	0.0	chr19	2163376	2163491	(56454125)	C	AluSp	SINE/Alu	(197)	116	1	1800271
1983	16.2	1.8	0.0	chr19	2482976	2483309	(56134307)	C	L1MB7	LINE/L1	(17)	6167	5828	1800907
1873	16.4	0.0	3.9	chr19	2483326	2483630	(56133986)	+	AluJb	SINE/Alu	3	295	(17)	1800908
474	31.6	5.0	5.9	chr19	2483819	2484258	(56133358)	+	L2b	LINE/L2	2996	3421	(5)	1800909
572	28.8	6.6	3.4	chr19	2484411	2484615	(56133001)	+	MIR	SINE/MIR	51	262	(0)	1800910
1891	13.3	5.8	0.0	chr19	2484971	2485248	(56132368)	C	AluSx1	SINE/Alu	(17)	295	1	1800911
1000	17.7	0.0	0.0	chr19	2600970	2601127	(56016489)	+	AluJr	SINE/Alu	118	275	(37)	1801203
187	14.7	2.9	0.0	chr19	2601188	2601221	(56016395)	C	MIRb	SINE/MIR	(212)	56	22	1801204
245	35.5	1.1	1.1	chr19	2601452	2601545	(56016071)	+	L2b	LINE/L2	3234	3327	(48)	1801205
1915	14.4	4.0	0.3	chr19	2601631	2601921	(56015695)	+	AluJo	SINE/Alu	1	302	(10)	1801206
2449	7.6	0.0	0.3	chr19	2826659	2826960	(55790656)	C	AluY	SINE/Alu	(9)	302	2	1801728
364	32.9	3.2	0.7	chr19	2827124	2827273	(55790343)	C	MIR	SINE/MIR	(50)	212	59	1801729
2203	11.5	0.0	0.0	chr19	2840491	2840786	(55776830)	C	AluSx1	SINE/Alu	(16)	296	1	1801761
688	22.5	0.9	0.7	chr19	3153278	3154797	(55462819)	+	(GATG)n	Simple_repeat	1	1534	(0)	1802521
208	20.4	0.0	2.0	chr19	3600775	3600824	(55016792)	+	L2c	LINE/L2	3092	3140	(247)	1803628
1332	11.0	24.8	0.0	chr19	3600827	3601053	(55016563)	C	AluJb	SINE/Alu	(10)	302	1	1803629
189	33.0	0.8	2.2	chr19	3605332	3606127	(55011489)	+	(CACA)n	Simple_repeat	1	802	(0)	1803638
226	20.9	3.1	3.5	chr19	4145112	4145754	(54471862)	+	GA-rich	Low_complexity	1	663	(0)	1804864
525	21.0	2.7	0.2	chr19	4334372	4335564	(54282052)	+	(CCAT)n	Simple_repeat	1	1225	(0)	1805380
1817	11.2	1.4	10.9	chr19	4532047	4532205	(54085411)	C	AluSq2	SINE/Alu	(22)	291	132	1805799
2146	8.3	0.4	0.0	chr19	4719061	4719370	(53898246)	+	AluSc8	SINE/Alu	14	311	(0)	1806255
291	33.6	6.5	8.9	chr19	4719371	4719475	(53898141)	C	MIRc	SINE/MIR	(144)	124	21	1806254
805	25.6	5.5	0.0	chr19	4719476	4719682	(53897934)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1806256
1747	11.6	0.0	12.2	chr19	4942014	4942143	(53675473)	+	AluJb	SINE/Alu	1	106	(206)	1806936
2161	10.1	2.9	0.3	chr19	4942144	4942180	(53675436)	C	AluSq2	SINE/Alu	(7)	306	265	1806937
214	27.8	3.2	7.2	chr19	5218873	5218969	(53398647)	+	MIRc	SINE/MIR	81	173	(95)	1807384
54	0.0	0.0	0.0	chr19	5287965	5288010	(53329606)	+	(CA)n	Simple_repeat	1	46	(0)	1807579
229	25.1	4.3	3.1	chr19	5566143	5567061	(53050555)	+	(AGAGAC)n	Simple_repeat	1	929	(0)	1808364
364	36.9	7.3	4.3	chr19	5567073	5567471	(53050145)	+	HAL1	LINE/L1	880	1291	(1216)	1808365
216	22.3	0.4	0.6	chr19	5681430	5681899	(52935717)	+	(CCAT)n	Simple_repeat	1	472	(0)	1808577
1198	10.4	0.0	0.0	chr19	5689474	5689627	(52927989)	C	AluSx	SINE/Alu	(22)	290	137	1808595
39	0.0	0.0	0.0	chr19	5689628	5689663	(52927953)	+	(TATT)n	Simple_repeat	1	36	(0)	1808596
2308	5.8	1.4	0.0	chr19	5689664	5689940	(52927676)	C	AluY	SINE/Alu	(30)	281	1	1808597
57	5.1	0.0	0.0	chr19	6190791	6190852	(52426764)	+	(AC)n	Simple_repeat	1	62	(0)	1809651
4085	17.3	4.3	4.6	chr19	6291798	6292476	(52325140)	+	MER52-int	LTR/ERV1	801	1487	(5604)	1809823
937	10.9	0.0	0.0	chr19	6407686	6407841	(52209775)	C	MER2	DNA/TcMar-Tigger	(82)	263	108	1810177
938	13.5	10.3	0.0	chr19	6407843	6407990	(52209626)	+	AluJr	SINE/Alu	137	301	(11)	1810180
532	17.4	5.0	6.5	chr19	6408048	6408099	(52209517)	C	MER2	DNA/TcMar-Tigger	(223)	122	70	1810177
2306	8.4	3.3	0.3	chr19	6408100	6408395	(52209221)	C	AluSq2	SINE/Alu	(7)	306	2	1810181
1927	14.4	1.7	0.7	chr19	6504459	6504749	(52112867)	C	AluJo	SINE/Alu	(18)	294	1	1810417
947	15.8	1.8	17.0	chr19	6504770	6504786	(52112830)	+	MER20	DNA/hAT-Charlie	1	14	(205)	1810418
46	4.3	0.0	0.0	chr19	6504787	6504834	(52112782)	+	(GT)n	Simple_repeat	1	48	(0)	1810419
947	15.8	1.8	17.0	chr19	6504835	6505075	(52112541)	+	MER20	DNA/hAT-Charlie	15	219	(0)	1810418
2075	11.8	0.0	5.1	chr19	6517610	6517922	(52099694)	C	AluSz	SINE/Alu	(15)	297	1	1810458
298	21.5	5.1	3.9	chr19	6529815	6530091	(52087525)	+	HERVIP10FH-int	LTR/ERV1	781	1011	(4091)	1810495
70	15.2	3.7	2.4	chr19	6530094	6530254	(52087362)	+	(ACAGAG)n	Simple_repeat	1	167	(0)	1810496
171	22.6	0.0	0.0	chr19	6532267	6532635	(52084981)	+	(GTGTGT)n	Simple_repeat	1	369	(0)	1810500
328	19.7	1.1	0.6	chr19	6709963	6710622	(51906994)	+	GA-rich	Low_complexity	1	667	(0)	1810972
192	13.4	3.3	3.5	chr19	6717444	6717863	(51899753)	+	(GTGTGTT)n	Simple_repeat	1	434	(0)	1810986
33	8.1	4.3	2.7	chr19	6717893	6717962	(51899654)	+	(TG)n	Simple_repeat	1	73	(0)	1810987
225	32.6	8.0	0.0	chr19	7170812	7170903	(51446713)	+	L2b	LINE/L2	3269	3368	(7)	1812174
273	19.0	0.0	0.0	chr19	7171227	7171284	(51446332)	C	Alu	SINE/Alu	(1)	300	243	1812175
297	19.9	2.8	1.4	chr19	7171352	7171455	(51446161)	+	MLT1J	LTR/ERVL-MaLR	222	404	(206)	1812176
1485	20.3	17.8	5.0	chr19	7383465	7383868	(51233748)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	1812806
1670	11.2	11.3	0.0	chr19	7616935	7617216	(51000400)	C	AluSz	SINE/Alu	(0)	312	1	1813367
392	36.9	0.7	1.7	chr19	7841995	7843835	(50773781)	+	(GT)n	Simple_repeat	1	1854	(0)	1813848
1794	12.7	10.1	0.0	chr19	8039781	8040048	(50577568)	+	AluSx1	SINE/Alu	1	298	(14)	1814244
269	34.7	0.8	2.5	chr19	8040078	8040198	(50577418)	+	MIR	SINE/MIR	121	239	(23)	1814245
1277	13.5	0.5	1.4	chr19	8040266	8040476	(50577140)	C	AluSx	SINE/Alu	(0)	312	104	1814246
593	29.2	8.5	0.0	chr19	8115840	8116055	(50501561)	+	MER103C	DNA/hAT-Charlie	2	237	(60)	1814434
213	38.9	25.4	2.5	chr19	8116152	8116387	(50501229)	C	L3	LINE/CR1	(227)	3872	3583	1814435
102	39.4	1.1	0.7	chr19	8117739	8118303	(50499313)	+	(CA)n	Simple_repeat	1	571	(0)	1814437
1181	16.2	0.0	0.0	chr19	8118305	8118477	(50499139)	+	AluJb	SINE/Alu	128	300	(12)	1814438
35	0.0	0.0	0.0	chr19	8240586	8240615	(50377001)	+	(GT)n	Simple_repeat	1	30	(0)	1814796
2198	8.8	0.3	0.7	chr19	8417749	8418063	(50199553)	C	AluSp	SINE/Alu	(0)	313	1	1815264
2379	7.5	0.0	0.0	chr19	8526047	8526341	(50091275)	+	AluSg4	SINE/Alu	1	295	(15)	1815490
16	17.0	0.0	5.4	chr19	8526342	8526366	(50091250)	+	(TC)n	Simple_repeat	2	25	(0)	1815491
370	29.7	11.4	0.7	chr19	8599026	8599174	(50018442)	C	MIR	SINE/MIR	(9)	253	87	1815677
17	16.4	3.9	3.7	chr19	8599318	8599343	(50018273)	+	(CTAT)n	Simple_repeat	1	27	(0)	1815678
2410	7.3	0.0	0.0	chr19	8599344	8599630	(50017986)	C	AluSq2	SINE/Alu	(26)	287	1	1815679
26	0.0	0.0	0.0	chr19	8673836	8673860	(49943756)	+	(ATTG)n	Simple_repeat	1	25	(0)	1815892
2234	9.3	0.0	0.0	chr19	8673861	8674139	(49943477)	C	AluSc8	SINE/Alu	(32)	279	1	1815893
15	28.7	1.9	1.9	chr19	9935758	9935810	(48681806)	+	(CA)n	Simple_repeat	1	54	(0)	1818497
26	9.3	0.0	2.1	chr19	10010012	10010059	(48607557)	+	(ATGCACACAC)n	Simple_repeat	1	48	(0)	1818679
52	2.1	0.0	0.0	chr19	10404178	10404226	(48213390)	+	(CA)n	Simple_repeat	1	49	(0)	1819650
2506	7.4	0.3	0.0	chr19	10870209	10870517	(47747099)	+	AluSx	SINE/Alu	1	310	(2)	1820886
1688	16.1	9.3	0.0	chr19	11168304	11168576	(47449040)	C	AluJo	SINE/Alu	(11)	301	1	1821633
663	23.9	27.1	2.2	chr19	11168577	11168720	(47448896)	+	L2a	LINE/L2	3217	3425	(1)	1821631
204	22.7	19.8	1.0	chr19	11168719	11168816	(47448800)	+	MIR	SINE/MIR	11	131	(131)	1821634
1788	17.6	0.0	2.3	chr19	11168920	11169057	(47448559)	+	AluJr	SINE/Alu	1	133	(179)	1821635
2213	9.8	1.0	1.6	chr19	11199866	11200170	(47417446)	+	AluSx1	SINE/Alu	2	304	(8)	1821716
2268	8.4	0.0	1.0	chr19	11294396	11294703	(47322913)	C	AluSc8	SINE/Alu	(5)	306	2	1821959
18	18.3	3.3	4.8	chr19	11355676	11355736	(47261880)	+	G-rich	Low_complexity	1	63	(0)	1822122
296	32.0	2.6	2.6	chr19	11533024	11533177	(47084439)	C	L1ME4b	LINE/L1	(419)	473	320	1822582
2399	6.3	0.0	0.0	chr19	11533235	11533558	(47084058)	C	AluY	SINE/Alu	(0)	311	1	1822583
1149	28.4	2.0	5.0	chr19	12276407	12276660	(46340956)	+	MER68	LTR/ERVL	1	256	(307)	1824127
1480	24.6	8.1	2.9	chr19	13212833	13213638	(45403978)	+	L2a	LINE/L2	2588	3425	(1)	1826152
12	17.2	4.9	2.3	chr19	13229144	13229184	(45388432)	+	(CCAGCC)n	Simple_repeat	1	43	(0)	1826197
1922	13.8	0.3	1.7	chr19	13260660	13260950	(45356666)	C	AluJr	SINE/Alu	(25)	287	1	1826281
804	26.5	11.2	0.4	chr19	13260959	13261189	(45356427)	+	MER46C	DNA/TcMar-Tigger	80	338	(0)	1826282
18	27.7	0.0	1.7	chr19	13294047	13294105	(45323511)	+	(TAA)n	Simple_repeat	1	59	(0)	1826359
473	11.1	0.0	0.0	chr19	13294161	13294223	(45323393)	+	AluJo	SINE/Alu	240	302	(10)	1826360
394	31.5	6.5	1.4	chr19	13294252	13294396	(45323220)	C	MER20B	DNA/hAT-Charlie	(531)	252	100	1826361
678	15.1	1.1	0.0	chr19	13294395	13294487	(45323129)	C	FLAM_A	SINE/Alu	(48)	94	1	1826362
2201	11.9	1.7	0.3	chr19	13294488	13294782	(45322834)	C	AluSz6	SINE/Alu	(7)	305	7	1826363
240	31.5	1.4	1.4	chr19	13295124	13295197	(45322419)	+	L2b	LINE/L2	3302	3375	(0)	1826364
409	33.3	6.2	0.6	chr19	13295286	13295454	(45322162)	+	MER20B	DNA/hAT-Charlie	74	252	(531)	1826365
2060	16.0	0.0	1.0	chr19	13295480	13295791	(45321825)	C	AluJr4	SINE/Alu	(0)	312	4	1826366
2070	14.3	0.0	2.5	chr19	13300941	13301255	(45316361)	C	AluJr	SINE/Alu	(5)	307	1	1826380
295	29.9	0.0	9.3	chr19	13717260	13717366	(44900250)	C	L2a	LINE/L2	(8)	3418	3322	1827587
263	33.7	7.1	3.5	chr19	13717421	13717623	(44899993)	+	LTR16E2	LTR/ERVL	107	317	(221)	1827588
2224	11.6	2.6	0.0	chr19	13917698	13917999	(44699617)	+	AluSx	SINE/Alu	2	311	(1)	1828122
246	28.3	12.4	2.8	chr19	13918245	13918353	(44699263)	+	MIRb	SINE/MIR	31	151	(117)	1828123
986	18.3	0.0	1.2	chr19	14187953	14188116	(44429500)	+	FRAM	SINE/Alu	5	166	(10)	1828779
259	33.3	1.1	2.1	chr19	14188157	14188251	(44429365)	+	MIR	SINE/MIR	37	130	(132)	1828780
282	34.3	5.3	3.8	chr19	14188507	14188691	(44428925)	+	L2	LINE/L2	2504	2691	(728)	1828781
1603	19.9	5.8	5.6	chr19	14193601	14193967	(44423649)	+	MLT1C	LTR/ERVL-MaLR	35	405	(62)	1828797
1647	14.4	10.6	0.7	chr19	14193968	14194238	(44423378)	+	AluJo	SINE/Alu	9	309	(3)	1828798
1603	19.9	5.8	5.6	chr19	14194239	14194302	(44423314)	+	MLT1C	LTR/ERVL-MaLR	406	467	(0)	1828797
33	0.0	0.0	0.0	chr19	14244283	14244313	(44373303)	+	(AAAT)n	Simple_repeat	1	31	(0)	1828936
16	14.2	0.0	0.0	chr19	14244381	14244411	(44373205)	+	(AAAT)n	Simple_repeat	1	31	(0)	1828937
2320	11.6	0.0	0.0	chr19	14244609	14244910	(44372706)	C	AluSq2	SINE/Alu	(11)	302	1	1828938
2272	10.7	0.7	0.3	chr19	14244922	14245221	(44372395)	C	AluSx	SINE/Alu	(11)	301	1	1828939
2320	12.5	0.0	0.3	chr19	15194676	15194987	(43422629)	+	AluSp	SINE/Alu	3	313	(0)	1831341
16	29.6	1.5	3.0	chr19	15195008	15195072	(43422544)	+	(AC)n	Simple_repeat	1	66	(0)	1831342
294	31.1	1.9	1.1	chr19	16773767	16775019	(41842597)	+	(TCCA)n	Simple_repeat	1	1263	(0)	1834737
13	11.9	2.3	8.9	chr19	16897842	16897885	(41719731)	+	G-rich	Low_complexity	1	45	(0)	1835033
5333	9.6	1.2	3.8	chr19	16958122	16958786	(41658830)	C	L1PREC2	LINE/L1	(0)	6160	5493	1835162
2365	10.4	0.0	0.0	chr19	16959541	16959838	(41657778)	C	AluSg4	SINE/Alu	(12)	298	1	1835165
5333	9.6	1.2	3.8	chr19	16959839	16959872	(41657744)	C	L1PREC2	LINE/L1	(791)	5369	5336	1835162
218	34.2	3.2	2.2	chr19	18119418	18119586	(40498030)	+	MIR1_Amn	SINE/MIR	49	218	(50)	1838152
447	17.9	4.4	0.0	chr19	18295016	18295978	(40321638)	+	(TCCA)n	Simple_repeat	1	1005	(0)	1838559
306	35.6	5.7	0.6	chr19	18416486	18416841	(40200775)	+	L2c	LINE/L2	2798	3187	(188)	1838866
2139	14.3	1.3	0.0	chr19	19107351	19107658	(39509958)	+	AluSx	SINE/Alu	1	312	(0)	1840272
24367	9.4	0.9	0.2	chr19	22235168	22238131	(36379485)	C	HERVL-int	LTR/ERVL	(2405)	3249	261	1845044
1162	27.4	13.0	1.2	chr19	28403510	28404111	(30213505)	+	L2a	LINE/L2	2476	3141	(285)	1848714
216	28.8	14.8	8.0	chr19	28601744	28602122	(30015494)	+	L2c	LINE/L2	2924	3366	(60)	1849040
241	26.9	1.8	0.6	chr19	28846142	28846814	(29770802)	+	(TG)n	Simple_repeat	1	685	(0)	1849313
657	17.8	3.7	0.1	chr19	29015377	29016739	(29600877)	+	(CT)n	Simple_repeat	1	1414	(0)	1849615
1732	16.3	2.9	0.0	chr19	29439515	29439845	(29177771)	+	LTR38B	LTR/ERV1	11	351	(259)	1850244
7350	14.4	10.3	3.9	chr19	29439846	29441309	(29176307)	+	LTR12C	LTR/ERV1	3	1570	(9)	1850245
12	0.0	0.0	5.0	chr19	29587361	29587380	(29030236)	+	(AGT)n	Simple_repeat	1	20	(0)	1850447
1448	27.1	11.5	0.0	chr19	29655501	29655909	(28961707)	C	LTR16B	LTR/ERVL	(0)	463	2	1850577
2345	11.3	0.0	0.3	chr19	29888334	29888642	(28728974)	+	AluSq2	SINE/Alu	1	308	(5)	1851074
458	25.4	0.6	0.5	chr19	30067848	30068841	(28548775)	+	(CATC)n	Simple_repeat	1	994	(0)	1851349
56	7.4	0.0	0.0	chr19	30068842	30068914	(28548702)	+	(TCCA)n	Simple_repeat	1	73	(0)	1851350
458	25.4	0.6	0.5	chr19	30068915	30069019	(28548597)	+	(CATC)n	Simple_repeat	3	108	(0)	1851351
282	33.2	0.2	0.7	chr19	30170954	30171708	(28445908)	+	(GTGT)n	Simple_repeat	3	756	(0)	1851506
513	25.9	11.6	5.1	chr19	30337675	30337877	(28279739)	+	MIRb	SINE/MIR	47	265	(3)	1851720
325	20.1	0.9	0.3	chr19	30337888	30338541	(28279075)	+	(TGA)n	Simple_repeat	1	660	(0)	1851721
35	7.8	1.9	0.0	chr19	30426961	30427014	(28190602)	+	(ATCC)n	Simple_repeat	1	55	(0)	1851841
320	24.6	3.2	12.9	chr19	30427074	30427213	(28190403)	+	MIR3	SINE/MIR	71	196	(12)	1851842
478	21.2	0.2	0.0	chr19	30434665	30435628	(28181988)	+	(TGATGA)n	Simple_repeat	1	966	(0)	1851857
219	21.9	0.4	0.8	chr19	31205931	31206402	(27411214)	+	(ATGG)n	Simple_repeat	1	474	(0)	1852894
26	12.6	0.0	0.0	chr19	31292623	31292674	(27324942)	+	(CCAT)n	Simple_repeat	1	52	(0)	1853010
57	9.9	1.8	1.8	chr19	31292722	31292833	(27324783)	+	(CCAT)n	Simple_repeat	1	114	(0)	1853010
294	34.8	9.3	5.1	chr19	31309742	31309998	(27307618)	+	L2c	LINE/L2	3110	3378	(9)	1853030
1925	14.2	1.1	0.4	chr19	31332825	31333105	(27284511)	+	AluJb	SINE/Alu	1	283	(29)	1853059
52	0.0	0.0	0.0	chr19	31333107	31333153	(27284463)	+	(AATA)n	Simple_repeat	1	47	(0)	1853060
16	5.3	0.0	0.0	chr19	32345270	32345289	(26272327)	+	(A)n	Simple_repeat	1	20	(0)	1854638
3207	19.7	11.1	2.2	chr19	32373384	32374169	(26243447)	C	Tigger6a	DNA/TcMar-Tigger	(211)	872	8	1854681
18	0.0	0.0	0.0	chr19	32374170	32374189	(26243427)	+	(AC)n	Simple_repeat	1	20	(0)	1854682
647	28.8	7.2	5.3	chr19	32374202	32374465	(26243151)	C	L1M1	LINE/L1	(1701)	4445	4173	1854683
2364	9.5	0.0	1.3	chr19	32516341	32516656	(26100960)	C	AluSx1	SINE/Alu	(0)	312	1	1854927
232	33.7	11.3	8.8	chr19	32516657	32516879	(26100737)	+	L2b	LINE/L2	3082	3324	(51)	1854926
521	19.1	5.1	1.1	chr19	33078624	33078760	(25538856)	C	FLAM_C	SINE/Alu	(72)	230	32	1856118
2299	9.1	0.0	2.3	chr19	33078832	33079140	(25538476)	+	AluSx	SINE/Alu	11	312	(0)	1856119
1000	28.8	6.6	4.2	chr19	33081373	33081885	(25535731)	C	L2a	LINE/L2	(58)	3317	2811	1856124
1843	17.2	0.0	2.4	chr19	33122783	33123073	(25494543)	+	AluJr	SINE/Alu	1	284	(28)	1856221
50	0.0	0.0	0.0	chr19	33123074	33123118	(25494498)	+	(AAAT)n	Simple_repeat	1	45	(0)	1856222
2407	8.4	0.3	2.8	chr19	33123119	33123438	(25494178)	+	AluSp	SINE/Alu	2	313	(0)	1856223
90	4.0	1.9	0.0	chr19	33146433	33146536	(25471080)	+	(TTCC)n	Simple_repeat	1	106	(0)	1856285
2069	10.7	2.4	0.0	chr19	33146537	33146816	(25470800)	C	AluSx	SINE/Alu	(24)	288	2	1856286
573	17.1	4.2	0.7	chr19	33249725	33250982	(25366634)	+	(AC)n	Simple_repeat	1	1311	(0)	1856479
35	8.8	0.0	0.0	chr19	33274201	33274248	(25343368)	+	(TG)n	Simple_repeat	1	48	(0)	1856521
49	37.9	0.0	0.9	chr19	33274297	33274517	(25343099)	+	(GT)n	Simple_repeat	1	221	(0)	1856522
310	25.0	4.3	1.1	chr19	33280120	33280208	(25337408)	+	MIRb	SINE/MIR	163	254	(14)	1856530
95	9.0	0.0	0.0	chr19	33280383	33280516	(25337100)	+	(ACACAC)n	Simple_repeat	1	134	(0)	1856531
5215	20.4	3.5	5.0	chr19	33355359	33356342	(25261274)	C	L1M4b	LINE/L1	(4437)	2430	1454	1856658
224	21.8	7.7	2.0	chr19	33458003	33458881	(25158735)	+	(GT)n	Simple_repeat	1	929	(0)	1856794
462	19.2	3.9	4.4	chr19	33505649	33507069	(25110547)	+	(AC)n	Simple_repeat	1	1477	(0)	1856851
295	22.1	4.0	1.0	chr19	33657029	33657124	(24960492)	C	L1M5	LINE/L1	(3565)	2581	2483	1857120
83	18.0	0.0	0.7	chr19	33657127	33657270	(24960346)	+	(AC)n	Simple_repeat	1	144	(0)	1857124
2136	12.0	0.0	1.0	chr19	33657271	33657571	(24960045)	C	AluSz	SINE/Alu	(14)	298	1	1857125
25	26.9	3.8	1.8	chr19	33795641	33795746	(24821870)	+	GA-rich	Low_complexity	1	110	(0)	1857330
31	20.7	5.2	5.0	chr19	33796639	33796772	(24820844)	+	GA-rich	Low_complexity	1	141	(0)	1857332
43	0.0	0.0	0.0	chr19	33797248	33797284	(24820332)	+	(GT)n	Simple_repeat	1	37	(0)	1857333
20	0.0	0.0	3.9	chr19	33797285	33797303	(24820313)	+	(CG)n	Simple_repeat	1	19	(0)	1857334
1883	10.1	0.0	12.9	chr19	33821466	33821838	(24795778)	C	AluSx1	SINE/Alu	(0)	312	1	1857358
299	19.3	2.0	1.1	chr19	34056885	34057550	(24560066)	+	(TGGA)n	Simple_repeat	1	672	(0)	1857792
2368	9.0	0.3	0.0	chr19	34234482	34234782	(24382834)	+	AluSp	SINE/Alu	2	303	(10)	1858204
1458	11.9	0.0	6.2	chr19	34234829	34234863	(24382753)	+	AluJr	SINE/Alu	88	122	(190)	1858205
56	0.0	0.0	0.0	chr19	34234864	34234913	(24382703)	+	(TTAT)n	Simple_repeat	1	50	(0)	1858206
2423	5.0	0.4	0.0	chr19	34234915	34235194	(24382422)	C	AluYj4	SINE/Alu	(30)	281	1	1858207
1371	21.5	4.6	5.3	chr19	34550278	34550670	(24066946)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	1858835
560	10.3	2.5	0.0	chr19	34678152	34678229	(23939387)	C	AluSz	SINE/Alu	(224)	88	9	1858989
8034	20.2	2.5	4.8	chr19	34714492	34716560	(23901056)	+	L1MA5	LINE/L1	2763	4828	(1472)	1859030
278	34.8	5.6	0.0	chr19	34734412	34734546	(23883070)	+	MIR	SINE/MIR	50	192	(70)	1859056
550	22.0	2.8	3.4	chr19	34973392	34973537	(23644079)	+	MER5A1	DNA/hAT-Charlie	1	145	(21)	1859419
783	18.9	1.8	6.1	chr19	34973560	34973603	(23644013)	C	MER5B	DNA/hAT-Charlie	(0)	178	143	1859420
56	0.0	0.0	0.0	chr19	34973604	34973651	(23643965)	+	(GT)n	Simple_repeat	1	48	(0)	1859421
2231	8.5	0.3	0.0	chr19	34973652	34973934	(23643682)	C	AluSx1	SINE/Alu	(28)	284	1	1859422
37	28.6	2.4	0.8	chr19	35031335	35031458	(23586158)	+	GA-rich	Low_complexity	1	127	(0)	1859553
334	25.0	1.4	0.0	chr19	35049633	35049704	(23567912)	C	MIR	SINE/MIR	(1)	261	189	1859592
1388	22.4	4.3	1.1	chr19	35289546	35289817	(23327799)	+	AluJo	SINE/Alu	5	285	(27)	1860108
45	0.0	0.0	0.0	chr19	35289819	35289859	(23327757)	+	(ATAA)n	Simple_repeat	1	41	(0)	1860109
1060	23.2	5.8	7.3	chr19	35289860	35290020	(23327596)	+	MLT1B	LTR/ERVL-MaLR	170	320	(70)	1860107
778	15.1	5.8	5.0	chr19	35297120	35299087	(23318529)	+	(AC)n	Simple_repeat	1	1982	(0)	1860124
2269	16.9	2.1	2.3	chr19	35323259	35323694	(23293922)	C	L1MD2	LINE/L1	(504)	5738	5304	1860181
2076	10.9	2.1	0.0	chr19	35323695	35324014	(23293602)	C	AluSx	SINE/Alu	(0)	312	1	1860186
2290	11.9	0.0	0.6	chr19	35385662	35385973	(23231643)	C	AluSx1	SINE/Alu	(2)	310	1	1860296
11223	11.9	4.9	3.8	chr19	35385974	35386125	(23231491)	C	LOR1-int	LTR/ERV1	(5987)	2133	2001	1860294
2184	11.0	0.0	0.0	chr19	35386126	35386453	(23231163)	C	AluSx	SINE/Alu	(0)	312	5	1860297
262	24.5	0.2	0.0	chr19	35392830	35393428	(23224188)	+	(TG)n	Simple_repeat	1	600	(0)	1860310
115	25.7	3.8	1.9	chr19	35562774	35563184	(23054432)	+	(TCTC)n	Simple_repeat	1	418	(0)	1860656
104	17.0	0.4	6.7	chr19	35694035	35694303	(22923313)	+	(CCT)n	Simple_repeat	1	270	(0)	1860988
336	11.5	0.0	15.4	chr19	35694309	35694332	(22923284)	C	FRAM	SINE/Alu	(20)	156	136	1860989
904	19.2	0.0	6.2	chr19	35694333	35694509	(22923107)	+	AluJo	SINE/Alu	137	302	(10)	1860990
2461	7.9	0.0	0.3	chr19	35707365	35707667	(22909949)	C	AluSc	SINE/Alu	(7)	302	1	1861027
511	22.2	16.9	0.2	chr19	35805794	35806055	(22811561)	C	L2a	LINE/L2	(194)	3181	2887	1861183
1857	17.0	0.7	0.3	chr19	35806062	35806383	(22811233)	C	AluJr	SINE/Alu	(0)	312	1	1861184
190	37.3	9.6	0.6	chr19	35819722	35819883	(22797733)	+	L2	LINE/L2	2811	2988	(431)	1861232
243	23.7	9.5	3.8	chr19	35820006	35820057	(22797559)	+	L2	LINE/L2	2339	2396	(1023)	1861233
62	0.0	0.0	0.0	chr19	35820058	35820110	(22797506)	+	(AC)n	Simple_repeat	1	53	(0)	1861234
243	23.7	9.5	3.8	chr19	35820111	35820136	(22797480)	+	L2	LINE/L2	2397	2422	(997)	1861233
368	26.9	4.4	0.0	chr19	35820143	35820272	(22797344)	+	MER20B	DNA/hAT-Charlie	7	142	(641)	1861235
1564	16.7	12.1	0.0	chr19	35881890	35882165	(22735451)	+	7SLRNA	srpRNA	1	314	(6)	1861356
47	0.0	2.2	0.0	chr19	35882166	35882211	(22735405)	+	(AAAT)n	Simple_repeat	1	47	(0)	1861357
298	22.9	4.5	0.0	chr19	35882213	35882302	(22735314)	+	MER91B	DNA/hAT-Tip100	44	202	(3322)	1861358
274	19.5	14.4	0.0	chr19	35882320	35882396	(22735220)	+	MER91B	DNA/hAT-Tip100	100	189	(1)	1861359
800	9.7	0.0	23.7	chr19	35947304	35947510	(22670106)	+	AluJr	SINE/Alu	140	297	(15)	1861521
49	0.0	0.0	0.0	chr19	35947598	35947639	(22669977)	+	(GT)n	Simple_repeat	1	42	(0)	1861522
1868	8.6	7.9	0.0	chr19	35947640	35947894	(22669722)	C	AluSc8	SINE/Alu	(34)	277	1	1861523
864	22.2	9.8	1.5	chr19	35999156	35999425	(22618191)	+	LTR16E1	LTR/ERVL	209	503	(35)	1861652
1875	10.4	1.7	11.3	chr19	35999500	35999827	(22617789)	C	AluSx1	SINE/Alu	(14)	298	3	1861653
28	6.0	0.0	0.0	chr19	36023057	36023091	(22594525)	+	(AAT)n	Simple_repeat	1	35	(0)	1861699
1907	13.7	2.0	1.7	chr19	36023092	36023254	(22594362)	+	AluSz	SINE/Alu	138	300	(12)	1861697
211	34.0	12.7	2.8	chr19	36023297	36023566	(22594050)	+	L2c	LINE/L2	2964	3259	(167)	1861682
1803	28.6	1.5	1.5	chr19	36167611	36168089	(22449527)	C	ERVL-E-int	LTR/ERVL	(2854)	2813	2335	1861994
1959	16.8	0.3	0.0	chr19	36168112	36168415	(22449201)	C	AluSz	SINE/Alu	(7)	305	1	1862012
34	24.4	3.1	1.0	chr19	36214072	36214169	(22403447)	+	(AC)n	Simple_repeat	1	101	(0)	1862144
15	13.3	0.0	5.4	chr19	36214204	36214240	(22403376)	+	(CACAGG)n	Simple_repeat	1	37	(0)	1862145
2012	7.7	9.6	0.0	chr19	36486838	36487110	(22130506)	+	AluYi6	SINE/Alu	1	302	(9)	1862643
2190	21.3	10.7	8.5	chr19	36487111	36487626	(22129990)	+	L1ME3	LINE/L1	5441	5940	(222)	1862641
15	27.1	2.2	6.5	chr19	36489006	36489096	(22128520)	+	(CAGTCA)n	Simple_repeat	1	93	(0)	1862647
11	21.6	10.9	0.0	chr19	36528911	36528974	(22088642)	+	(TTGTGTGA)n	Simple_repeat	1	71	(0)	1862727
15	16.8	0.0	0.0	chr19	36528950	36528976	(22088640)	+	(GT)n	Simple_repeat	1	27	(0)	1862728
25	7.3	4.7	0.0	chr19	36572901	36572943	(22044673)	+	(AAAC)n	Simple_repeat	1	45	(0)	1862814
19	21.8	5.0	1.6	chr19	36604933	36604992	(22012624)	+	(CA)n	Simple_repeat	1	63	(0)	1862875
14880	16.0	3.4	0.7	chr19	36670072	36670819	(21946797)	+	ERVL-B4-int	LTR/ERVL	1940	2707	(3007)	1863014
2435	9.7	0.0	0.0	chr19	36670820	36671130	(21946486)	+	AluSx	SINE/Alu	1	311	(1)	1863016
192	25.7	10.7	0.0	chr19	36687879	36687972	(21929644)	+	L2a	LINE/L2	3260	3400	(26)	1863053
2042	5.9	0.0	2.8	chr19	36747398	36747651	(21869965)	+	AluY	SINE/Alu	51	297	(14)	1863163
2453	6.8	0.0	0.0	chr19	36797031	36797325	(21820291)	C	AluY	SINE/Alu	(16)	295	1	1863279
397	31.3	5.0	1.4	chr19	36837749	36837962	(21779654)	+	L2	LINE/L2	1826	2047	(1372)	1863351
41	2.6	0.0	0.0	chr19	36838107	36838146	(21779470)	+	(CA)n	Simple_repeat	1	40	(0)	1863352
23	29.9	4.0	1.0	chr19	36851461	36851559	(21766057)	+	(GT)n	Simple_repeat	1	103	(0)	1863384
2093	5.8	0.4	0.0	chr19	36915617	36915857	(21701759)	C	AluSc	SINE/Alu	(30)	279	38	1863508
19	21.8	0.0	2.2	chr19	36916623	36916667	(21700949)	+	(TG)n	Simple_repeat	1	45	(0)	1863509
209	27.8	19.4	2.2	chr19	36916809	36916944	(21700672)	+	L2	LINE/L2	2042	2206	(1213)	1863510
2333	15.2	2.2	6.2	chr19	37093519	37093684	(21523932)	C	MSTB	LTR/ERVL-MaLR	(282)	144	2	1863837
1097	17.1	0.8	12.5	chr19	37093687	37093974	(21523642)	+	L1MB7	LINE/L1	5869	6122	(62)	1863836
1993	16.4	0.0	3.8	chr19	37160051	37160343	(21457273)	+	AluJb	SINE/Alu	1	284	(28)	1863917
51	0.0	0.0	0.0	chr19	37160344	37160389	(21457227)	+	(AAAT)n	Simple_repeat	1	46	(0)	1863918
1993	16.4	0.0	3.8	chr19	37160390	37160412	(21457204)	+	AluJb	SINE/Alu	285	305	(7)	1863917
2382	21.9	9.8	8.8	chr19	37160413	37160854	(21456762)	+	L1MD	LINE/L1	3090	3548	(2598)	1863916
2253	10.3	0.0	1.6	chr19	37210885	37211196	(21406420)	C	AluSz	SINE/Alu	(4)	308	2	1864025
632	23.1	0.0	0.0	chr19	37217280	37217413	(21400203)	+	L1ME1	LINE/L1	6046	6179	(0)	1864024
949	24.6	3.8	0.7	chr19	37217404	37217682	(21399934)	C	L1MB7	LINE/L1	(0)	6184	5897	1864045
32	25.9	4.5	3.7	chr19	37293674	37293684	(21323932)	+	(ACAG)n	Simple_repeat	1	25	(139)	1864182
49	16.0	1.1	1.1	chr19	37293685	37293776	(21323840)	+	GA-rich	Low_complexity	1	93	(0)	1864183
32	25.9	4.5	3.7	chr19	37293777	37293830	(21323786)	+	(ACAG)n	Simple_repeat	26	164	(0)	1864182
37	21.9	2.2	1.1	chr19	37293783	37293874	(21323742)	+	(CA)n	Simple_repeat	1	94	(0)	1864184
11534	1.7	0.0	2.1	chr19	37293875	37295470	(21322146)	C	SST1	Satellite/centr	(0)	1563	1	1864185
2529	6.7	0.0	0.0	chr19	37364829	37365128	(21252488)	C	AluYf1	SINE/Alu	(11)	300	1	1864312
3707	12.0	1.3	11.7	chr19	37365129	37365830	(21251786)	C	LTR76	LTR/ERV1	(46)	629	1	1864311
27	29.8	0.0	4.0	chr19	37595201	37595301	(21022315)	+	(TG)n	Simple_repeat	1	101	(0)	1864717
6774	10.5	0.2	0.8	chr19	37775576	37777171	(20840445)	+	L1PB1	LINE/L1	4128	5677	(474)	1865088
75	30.1	0.8	2.0	chr19	37886567	37886818	(20730798)	+	(CTC)n	Simple_repeat	1	254	(0)	1865304
2173	10.6	0.0	0.3	chr19	37918588	37918871	(20698745)	+	AluSx1	SINE/Alu	1	283	(29)	1865375
52	0.0	0.0	0.0	chr19	37918872	37918918	(20698698)	+	(AAAT)n	Simple_repeat	1	47	(0)	1865376
2008	11.3	6.4	3.0	chr19	38219898	38220197	(20397419)	+	AluSz6	SINE/Alu	1	311	(1)	1866135
88	8.7	3.2	2.5	chr19	38220203	38220339	(20397277)	+	(GAAA)n	Simple_repeat	1	138	(0)	1866136
2684	3.6	1.6	0.0	chr19	38220340	38220665	(20396951)	+	AluY	SINE/Alu	1	311	(0)	1866137
25	34.7	0.0	0.0	chr19	38224430	38224568	(20393048)	+	(AC)n	Simple_repeat	1	139	(0)	1866146
21	17.9	6.8	2.5	chr19	38226235	38226308	(20391308)	+	(CCCCTT)n	Simple_repeat	1	79	(0)	1866153
27	24.6	1.1	3.2	chr19	38226309	38226325	(20391291)	+	(CCCCCTC)n	Simple_repeat	2	93	(0)	1866154
42	0.0	0.0	0.0	chr19	38226504	38226539	(20391077)	+	(AC)n	Simple_repeat	1	36	(0)	1866155
51	18.4	0.9	2.6	chr19	38226955	38227068	(20390548)	+	(TTTC)n	Simple_repeat	1	115	(0)	1866156
1965	17.2	0.7	0.0	chr19	38227070	38227377	(20390239)	C	AluJb	SINE/Alu	(2)	310	1	1866157
1399	26.2	19.7	0.1	chr19	38267372	38268154	(20349462)	C	L2a	LINE/L2	(2200)	1219	246	1866265
331	28.0	5.4	4.8	chr19	38333648	38333812	(20283804)	C	L2b	LINE/L2	(18)	3357	3192	1866426
698	17.6	0.0	0.0	chr19	38334112	38334230	(20283386)	+	MER5A	DNA/hAT-Charlie	1	119	(70)	1866427
34	30.9	3.5	4.5	chr19	38335927	38336107	(20281509)	+	G-rich	Low_complexity	1	179	(0)	1866434
17	16.2	8.0	1.9	chr19	38390051	38390100	(20227516)	+	GA-rich	Low_complexity	1	54	(0)	1866556
486	17.6	0.0	0.0	chr19	38468133	38468206	(20149410)	+	AluJo	SINE/Alu	95	168	(144)	1866727
18	8.5	0.0	0.0	chr19	38667333	38667357	(19950259)	+	(TG)n	Simple_repeat	1	25	(0)	1867209
2127	12.3	0.0	0.3	chr19	38766184	38766468	(19851148)	+	AluSx	SINE/Alu	1	284	(28)	1867390
48	0.0	0.0	3.8	chr19	38766469	38766521	(19851095)	+	(AAAT)n	Simple_repeat	1	53	(0)	1867391
1767	18.2	1.0	2.2	chr19	38766522	38766696	(19850920)	+	AluJo	SINE/Alu	137	309	(3)	1867389
2419	9.2	0.3	0.0	chr19	38799956	38800260	(19817356)	+	AluSc	SINE/Alu	2	307	(2)	1867474
106	34.9	2.1	2.7	chr19	38800725	38801334	(19816282)	+	(GATG)n	Simple_repeat	1	623	(0)	1867476
604	27.1	3.8	2.8	chr19	38801345	38801526	(19816090)	+	MIR	SINE/MIR	9	192	(70)	1867477
1942	10.4	0.4	0.0	chr19	38804281	38804540	(19813076)	C	AluSp	SINE/Alu	(14)	299	39	1867484
15	21.1	5.1	0.0	chr19	38804562	38804600	(19813016)	+	(CT)n	Simple_repeat	1	41	(0)	1867485
2506	14.7	0.5	0.7	chr19	38862477	38862887	(19754729)	C	LTR35A	LTR/ERV1	(0)	547	138	1867607
2333	9.8	0.0	0.7	chr19	38862888	38863192	(19754424)	C	AluSx1	SINE/Alu	(9)	303	1	1867608
430	29.3	10.3	4.2	chr19	38890226	38890403	(19727213)	C	MIRb	SINE/MIR	(25)	243	54	1867682
4169	5.9	0.6	0.2	chr19	38935164	38935673	(19681943)	C	MER9a3	LTR/ERVK	(0)	512	1	1867796
12541	5.7	0.6	0.8	chr19	38935674	38937299	(19680317)	C	HERVK9-int	LTR/ERVK	(0)	6021	4399	1867796
1781	16.6	0.0	1.6	chr19	38959610	38959916	(19657700)	+	AluJr	SINE/Alu	2	303	(9)	1867843
2003	21.7	13.8	4.5	chr19	38962221	38962706	(19654910)	+	LTR41	LTR/ERVL	64	622	(146)	1867851
2111	9.6	2.3	0.7	chr19	38962707	38963008	(19654608)	C	AluSc	SINE/Alu	(2)	307	1	1867852
189	18.8	0.0	0.0	chr19	38976578	38976609	(19641007)	C	MIRb	SINE/MIR	(43)	225	194	1867894
2038	12.4	0.0	0.3	chr19	38995729	38996019	(19621597)	C	AluSx1	SINE/Alu	(21)	291	2	1867952
570	14.6	3.7	0.0	chr19	39073976	39074078	(19543538)	+	Alu	SINE/Alu	206	312	(0)	1868175
63	18.1	2.6	3.2	chr19	39074079	39074232	(19543384)	+	GA-rich	Low_complexity	1	158	(0)	1868176
1555	20.8	2.1	10.1	chr19	39257371	39257666	(19359950)	C	L1MD1	LINE/L1	(68)	6291	6035	1868679
2379	7.8	0.3	1.6	chr19	39257667	39257974	(19359642)	C	AluY	SINE/Alu	(7)	304	1	1868681
1555	20.8	2.1	10.1	chr19	39257975	39258085	(19359531)	C	L1MD1	LINE/L1	(325)	6034	5922	1868679
43	0.0	0.0	0.0	chr19	39320306	39320342	(19297274)	+	(AC)n	Simple_repeat	1	37	(0)	1868830
16	17.1	3.0	0.0	chr19	39320466	39320498	(19297118)	+	(CA)n	Simple_repeat	1	34	(0)	1868831
319	10.0	0.0	0.0	chr19	39406231	39406270	(19211346)	C	AluYk11	SINE/Alu	(271)	40	1	1869011
12	14.6	0.0	5.9	chr19	39435800	39435833	(19181783)	+	(CCCTT)n	Simple_repeat	1	34	(0)	1869062
804	18.1	0.0	0.0	chr19	39631177	39631292	(18986324)	+	FLAM_A	SINE/Alu	1	116	(26)	1869421
482	24.1	2.8	3.5	chr19	39848439	39848580	(18769036)	C	L2b	LINE/L2	(58)	3317	3177	1869737
2192	24.9	11.4	8.9	chr19	39848738	39849713	(18767903)	+	L2	LINE/L2	401	1403	(2016)	1869738
57	24.5	4.6	1.0	chr19	39878439	39878633	(18738983)	+	(TCTC)n	Simple_repeat	1	204	(0)	1869809
270	28.1	4.6	4.6	chr19	39996743	39996850	(18620766)	C	L2c	LINE/L2	(0)	3387	3280	1870082
5319	13.9	2.1	2.7	chr19	40087626	40089321	(18528295)	+	L1MA8	LINE/L1	4609	6291	(0)	1870209
343	28.6	18.4	1.8	chr19	40165239	40165523	(18452093)	+	L2	LINE/L2	2550	2892	(527)	1870371
2129	8.2	1.4	0.0	chr19	40332976	40333254	(18284362)	+	AluSx1	SINE/Alu	1	283	(29)	1870776
52	0.0	1.8	1.8	chr19	40333255	40333309	(18284307)	+	(AAAT)n	Simple_repeat	1	56	(0)	1870777
2592	22.0	5.4	6.3	chr19	40333310	40333672	(18283944)	+	Tigger17a	DNA/TcMar-Tigger	305	653	(1)	1870778
2052	9.3	0.4	2.9	chr19	40346192	40346442	(18271174)	+	AluSx1	SINE/Alu	31	282	(30)	1870830
52	1.9	0.0	1.8	chr19	40346443	40346498	(18271118)	+	(AAAT)n	Simple_repeat	1	56	(0)	1870831
2052	9.3	0.4	2.9	chr19	40346499	40346526	(18271090)	+	AluSx1	SINE/Alu	283	303	(9)	1870830
2364	8.2	0.0	0.0	chr19	40346533	40346825	(18270791)	C	AluSc8	SINE/Alu	(18)	293	1	1870832
2386	7.7	0.0	0.0	chr19	40402892	40403190	(18214426)	+	AluSq2	SINE/Alu	5	303	(10)	1870959
1095	28.0	6.9	6.3	chr19	40403191	40403235	(18214381)	+	L2a	LINE/L2	3388	3425	(1)	1870949
530	24.8	14.6	5.8	chr19	40403330	40403552	(18214064)	C	MIR	SINE/MIR	(0)	262	17	1870960
728	31.9	7.0	5.7	chr19	40424526	40425238	(18192378)	C	L2a	LINE/L2	(145)	3242	2523	1871021
330	31.7	13.1	5.1	chr19	40426326	40426521	(18191095)	+	MIRb	SINE/MIR	54	267	(1)	1871023
415	30.1	5.8	4.0	chr19	40426517	40426717	(18190899)	+	MIR	SINE/MIR	11	215	(47)	1871024
245	30.7	0.1	1.1	chr19	40434245	40434336	(18183280)	+	MIRc	SINE/MIR	83	176	(86)	1871051
2325	6.2	2.7	0.0	chr19	40434442	40434729	(18182887)	C	AluSg	SINE/Alu	(14)	296	1	1871052
1707	16.6	0.7	5.7	chr19	40479824	40479969	(18137647)	+	AluJr	SINE/Alu	5	144	(168)	1871192
2356	9.0	0.0	0.3	chr19	40479970	40480270	(18137346)	+	AluY	SINE/Alu	1	300	(11)	1871193
1707	16.6	0.7	5.7	chr19	40480271	40480437	(18137179)	+	AluJr	SINE/Alu	145	302	(10)	1871192
1485	26.7	4.2	6.7	chr19	40480438	40480780	(18136836)	C	L1ME3A	LINE/L1	(132)	6041	5702	1871191
388	25.5	4.7	0.0	chr19	40548783	40548884	(18068732)	+	MIRb	SINE/MIR	96	202	(66)	1871383
435	27.9	14.1	0.5	chr19	40548900	40549083	(18068533)	C	L2a	LINE/L2	(215)	3160	2948	1871378
1565	14.0	2.8	5.8	chr19	40567006	40567298	(18050318)	+	AluJo	SINE/Alu	1	284	(28)	1871434
52	0.0	0.0	0.0	chr19	40567299	40567345	(18050271)	+	(AAAT)n	Simple_repeat	1	47	(0)	1871435
88	6.9	0.0	0.0	chr19	40569937	40570042	(18047574)	+	(CA)n	Simple_repeat	1	106	(0)	1871442
948	8.3	0.0	3.8	chr19	40577755	40577887	(18039729)	+	FLAM_C	SINE/Alu	1	128	(15)	1871454
51	0.0	0.0	0.0	chr19	40577949	40577992	(18039624)	+	(AC)n	Simple_repeat	1	44	(0)	1871455
44	0.0	0.0	0.0	chr19	40602146	40602183	(18015433)	+	(TG)n	Simple_repeat	1	38	(0)	1871501
15	7.2	3.3	0.0	chr19	40602184	40602206	(18015410)	+	(GGGGGT)n	Simple_repeat	1	24	(0)	1871502
1675	15.5	1.9	0.8	chr19	40604575	40604838	(18012778)	+	AluJr	SINE/Alu	14	280	(32)	1871505
2269	9.8	0.0	1.0	chr19	40606755	40607049	(18010567)	C	AluSz	SINE/Alu	(19)	293	2	1871507
33	25.9	5.2	2.5	chr19	40614100	40614253	(18003363)	+	(CTCCT)n	Simple_repeat	1	162	(0)	1871515
2242	12.8	0.6	0.6	chr19	40623162	40623474	(17994142)	C	AluSq2	SINE/Alu	(0)	313	1	1871535
42	0.0	0.0	0.0	chr19	40634800	40634837	(17982779)	+	(CAT)n	Simple_repeat	1	38	(0)	1871567
2307	10.2	0.0	0.7	chr19	40634848	40635152	(17982464)	+	AluSx1	SINE/Alu	1	303	(9)	1871568
1684	18.5	0.3	2.4	chr19	40797814	40798111	(17819505)	+	AluJo	SINE/Alu	1	292	(20)	1871991
35	19.6	0.0	1.4	chr19	41218733	41218804	(17398812)	+	(TG)n	Simple_repeat	1	72	(0)	1872914
15	14.9	2.6	2.5	chr19	41218857	41218895	(17398721)	+	(GGCTGG)n	Simple_repeat	1	40	(0)	1872915
16	14.4	2.5	2.4	chr19	41218943	41218982	(17398634)	+	(CCAGAGC)n	Simple_repeat	1	41	(0)	1872916
22	3.8	0.0	0.0	chr19	41261986	41262012	(17355604)	+	(CA)n	Simple_repeat	1	27	(0)	1873025
2410	9.7	0.0	0.3	chr19	41394755	41395063	(17222553)	+	AluSx4	SINE/Alu	3	310	(0)	1873341
292	11.3	19.5	0.0	chr19	41395064	41395125	(17222491)	C	AluSx	SINE/Alu	(225)	77	1	1873340
1166	28.3	16.2	1.9	chr19	41395402	41396096	(17221520)	+	L2	LINE/L2	1809	2622	(797)	1873342
1412	24.6	0.7	0.0	chr19	41494685	41494989	(17122627)	+	AluJb	SINE/Alu	1	307	(5)	1873525
402	34.5	3.9	5.5	chr19	41495001	41495420	(17122196)	C	ERV3-16A3_I-int	LTR/ERVL	(2670)	2556	2144	1873523
125	36.0	3.8	0.9	chr19	41914227	41915007	(16702609)	+	(CTCT)n	Simple_repeat	1	811	(0)	1874164
375	19.9	6.1	2.7	chr19	41918206	41919154	(16698462)	+	(AC)n	Simple_repeat	1	984	(0)	1874171
57	0.0	0.0	0.0	chr19	41993502	41993550	(16624066)	+	(CA)n	Simple_repeat	1	49	(0)	1874330
35	0.0	7.8	1.8	chr19	42177649	42177699	(16439917)	+	(GAGACACAC)n	Simple_repeat	1	55	(0)	1874741
20	24.0	0.0	5.6	chr19	42179210	42179281	(16438335)	+	GA-rich	Low_complexity	1	72	(0)	1874743
18	19.6	0.0	8.6	chr19	42179491	42179560	(16438056)	+	G-rich	Low_complexity	1	70	(0)	1874744
17	16.5	4.1	2.0	chr19	42269438	42269486	(16348130)	+	G-rich	Low_complexity	1	51	(0)	1874929
16	14.2	5.1	0.0	chr19	42269795	42269833	(16347783)	+	(AGAGAT)n	Simple_repeat	1	41	(0)	1874930
18	23.3	5.2	1.6	chr19	42283181	42283238	(16334378)	+	(TG)n	Simple_repeat	1	61	(0)	1874955
13	21.3	2.6	0.0	chr19	42283539	42283576	(16334040)	+	(AGTGTG)n	Simple_repeat	1	39	(0)	1874956
439	30.8	12.7	3.5	chr19	42397531	42397974	(16219642)	C	L2b	LINE/L2	(4)	3383	2910	1875199
626	30.6	8.9	0.6	chr19	43154706	43155053	(15462563)	+	HERVL-int	LTR/ERVL	3195	3574	(2080)	1876306
513	18.8	2.0	0.0	chr19	43155110	43155205	(15462411)	+	MLT1B	LTR/ERVL-MaLR	293	390	(0)	1876307
294	12.1	9.4	0.0	chr19	43155373	43155430	(15462186)	C	MIRc	SINE/MIR	(100)	168	105	1876308
24	12.1	0.0	0.0	chr19	43204348	43204383	(15413233)	+	(AC)n	Simple_repeat	1	36	(0)	1876382
327	28.3	12.1	3.5	chr19	43204457	43204771	(15412845)	+	L2a	LINE/L2	3032	3377	(49)	1876383
22291	28.8	3.9	4.0	chr19	43314474	43317093	(15300523)	C	HERVIP10F-int	LTR/ERV1	(5185)	2552	24	1876499
478	32.4	6.8	4.3	chr19	43389220	43389635	(15227981)	+	MLT1N2	LTR/ERVL-MaLR	82	508	(54)	1876635
2223	9.5	1.7	0.0	chr19	43539663	43539956	(15077660)	+	AluSz6	SINE/Alu	1	299	(13)	1877056
3044	8.7	0.5	1.4	chr19	43539957	43540174	(15077442)	+	L1PA11	LINE/L1	5958	6173	(1)	1877055
1511	16.1	0.0	3.5	chr19	43674882	43675136	(14942480)	C	AluJo	SINE/Alu	(66)	246	1	1877399
72	32.1	1.4	0.7	chr19	43675214	43675489	(14942127)	+	(TCTC)n	Simple_repeat	1	280	(0)	1877400
969	14.5	0.0	0.0	chr19	43782065	43782202	(14835414)	+	FLAM_C	SINE/Alu	1	138	(5)	1877660
14	9.9	2.8	5.4	chr19	43782510	43782545	(14835071)	+	(ACACA)n	Simple_repeat	1	37	(0)	1877661
2466	9.3	0.0	0.3	chr19	43783325	43783637	(14833979)	C	AluSx	SINE/Alu	(0)	312	1	1877662
29	2.8	2.8	0.0	chr19	43783687	43783722	(14833894)	+	(TCTCTCTG)n	Simple_repeat	1	37	(0)	1877663
2132	9.4	0.7	0.0	chr19	43799265	43799541	(14818075)	C	AluSx3	SINE/Alu	(32)	279	1	1877712
12	28.7	0.0	2.1	chr19	43827533	43827580	(14790036)	+	G-rich	Low_complexity	1	48	(0)	1877783
37	0.0	0.0	0.0	chr19	43901552	43901583	(14716033)	+	(CA)n	Simple_repeat	1	32	(0)	1877885
230	31.4	1.9	4.7	chr19	43902153	43902259	(14715357)	+	L2a	LINE/L2	3320	3423	(3)	1877886
273	29.1	8.5	3.8	chr19	43984557	43984713	(14632903)	+	MIR	SINE/MIR	70	234	(28)	1878008
275	35.3	3.8	4.3	chr19	44003235	44003444	(14614172)	+	MIRb	SINE/MIR	28	236	(26)	1878041
411	27.6	16.9	5.4	chr19	44051415	44051524	(14566092)	+	L2	LINE/L2	628	775	(2644)	1878118
1642	22.8	7.4	3.3	chr19	44111462	44111864	(14505752)	+	L1MB5	LINE/L1	5655	6088	(86)	1878222
3328	12.6	7.9	3.1	chr19	44111865	44112444	(14505172)	C	LTR9	LTR/ERV1	(0)	612	3	1878223
725	28.9	6.9	2.4	chr19	44140935	44141225	(14476391)	+	L2	LINE/L2	468	772	(2647)	1878265
194	31.7	9.6	0.8	chr19	44141949	44142072	(14475544)	+	MIR	SINE/MIR	104	239	(23)	1878266
355	25.6	8.8	0.6	chr19	44165401	44165557	(14452059)	+	MIR	SINE/MIR	61	231	(31)	1878310
5792	27.3	8.3	5.8	chr19	44183631	44183946	(14433670)	+	ERVL-E-int	LTR/ERVL	2296	2625	(3042)	1878336
843	27.4	2.2	0.9	chr19	44183947	44184167	(14433449)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	1878339
2183	12.5	0.3	0.0	chr19	44218892	44219186	(14398430)	C	AluSq2	SINE/Alu	(17)	296	1	1878401
4079	3.5	0.8	0.0	chr19	44220663	44221175	(14396441)	C	L1PA3	LINE/L1	(3)	6152	5636	1878403
523	26.4	8.2	11.9	chr19	44233449	44233614	(14384002)	C	L2a	LINE/L2	(62)	3364	3187	1878423
2219	10.3	0.7	0.7	chr19	44233615	44233906	(14383710)	+	AluSz6	SINE/Alu	1	292	(20)	1878424
523	26.4	8.2	11.9	chr19	44233907	44234057	(14383559)	C	L2a	LINE/L2	(240)	3186	3060	1878423
20909	8.1	0.6	0.5	chr19	44250029	44253909	(14363707)	+	L1PA7	LINE/L1	2264	6154	(0)	1878449
2250	13.2	0.0	0.0	chr19	44257042	44257345	(14360271)	+	AluSz	SINE/Alu	1	304	(8)	1878453
4739	19.6	5.2	3.7	chr19	44257346	44258283	(14359333)	+	L1M4	LINE/L1	2552	3540	(3207)	1878450
4675	13.9	3.2	0.1	chr19	44258678	44259488	(14358128)	+	Tigger2b_Pri	DNA/TcMar-Tigger	1	837	(231)	1878454
2394	9.4	0.7	0.3	chr19	44259489	44259797	(14357819)	C	AluSg	SINE/Alu	(0)	310	1	1878455
564	27.8	10.2	2.1	chr19	44260893	44261127	(14356489)	C	MIR	SINE/MIR	(0)	262	7	1878457
1927	13.1	4.3	0.7	chr19	44261163	44261453	(14356163)	+	AluJo	SINE/Alu	5	306	(6)	1878458
140	23.4	1.2	1.5	chr19	44582590	44582926	(14034690)	+	GA-rich	Low_complexity	1	341	(0)	1879041
14	26.0	1.9	1.9	chr19	44844984	44845035	(13772581)	+	G-rich	Low_complexity	1	53	(0)	1879785
2312	4.8	0.4	3.1	chr19	45653097	45653385	(12964231)	+	AluY	SINE/Alu	1	281	(30)	1881902
53	1.8	1.7	1.6	chr19	45653386	45653445	(12964171)	+	(AAAT)n	Simple_repeat	1	61	(0)	1881903
12	21.2	2.5	2.4	chr19	45730644	45730683	(12886933)	+	(CCACC)n	Simple_repeat	1	41	(0)	1882116
23	10.0	0.0	0.0	chr19	45972664	45972696	(12644920)	+	(CA)n	Simple_repeat	1	33	(0)	1882720
1287	24.1	6.7	6.5	chr19	46358588	46359031	(12258585)	C	LTR56	LTR/ERV1	(0)	445	1	1883475
237	14.2	9.1	2.3	chr19	46978440	46979121	(11638495)	+	(GT)n	Simple_repeat	1	744	(0)	1885012
14	13.1	0.0	0.0	chr19	47311153	47311178	(11306438)	+	(TTC)n	Simple_repeat	1	26	(0)	1885830
1977	11.8	2.6	0.0	chr19	47311230	47311526	(11306090)	+	AluSc	SINE/Alu	1	305	(4)	1885831
15	15.7	2.1	6.1	chr19	47422278	47422325	(11195291)	+	(CTCTCC)n	Simple_repeat	1	49	(0)	1886127
21	16.1	1.9	3.7	chr19	47422388	47422440	(11195176)	+	(TCC)n	Simple_repeat	1	54	(0)	1886128
439	25.1	5.0	5.0	chr19	47427349	47427570	(11190046)	+	LTR33	LTR/ERVL	280	501	(14)	1886141
284	32.2	12.2	5.3	chr19	47427626	47427907	(11189709)	+	L2	LINE/L2	2658	2961	(458)	1886142
230	20.0	0.0	0.0	chr19	47483859	47483903	(11133713)	C	MER117	DNA/hAT-Charlie	(95)	102	58	1886269
47	0.0	0.0	0.0	chr19	47743418	47743457	(10874159)	+	(GT)n	Simple_repeat	1	40	(0)	1886953
22	43.0	2.3	0.7	chr19	47997374	47997506	(10620110)	+	(AT)n	Simple_repeat	1	136	(0)	1887655
260	15.4	0.0	1.9	chr19	47997525	47997577	(10620039)	C	L1MA4	LINE/L1	(7)	6296	6245	1887656
814	15.6	0.0	0.0	chr19	47997590	47997711	(10619905)	C	AluJr	SINE/Alu	(181)	131	10	1887657
64	28.7	3.2	1.6	chr19	48868148	48868393	(9749223)	+	(TC)n	Simple_repeat	1	254	(0)	1889821
404	20.0	0.8	6.4	chr19	48868422	48868672	(9748944)	C	HERVIP10FH-int	LTR/ERV1	(4122)	980	744	1889822
298	21.0	6.9	1.2	chr19	48872685	48872766	(9744850)	C	MSR1	Satellite	(18)	93	7	1889835
2024	14.7	6.6	0.8	chr19	49282164	49282519	(9335097)	C	THE1D	LTR/ERVL-MaLR	(0)	381	4	1890791
1245	9.7	0.0	0.0	chr19	49282520	49282674	(9334942)	+	AluYh3	SINE/Alu	136	290	(21)	1890792
3262	23.7	8.0	5.4	chr19	49282675	49283162	(9334454)	+	HERVL32-int	LTR/ERVL	2206	2734	(684)	1890785
650	14.1	0.9	0.3	chr19	49427616	49427927	(9189689)	C	MSR1	Satellite	(16)	313	1	1891082
13	15.2	0.0	3.2	chr19	49441582	49441612	(9176004)	+	(GCCCC)n	Simple_repeat	1	31	(0)	1891100
11	25.1	2.2	2.2	chr19	49441925	49441969	(9175647)	+	(CCCCAC)n	Simple_repeat	1	46	(0)	1891101
1859	11.0	6.5	0.7	chr19	50026289	50026580	(8591036)	+	AluSx1	SINE/Alu	3	312	(0)	1892448
1184	14.8	0.0	4.3	chr19	50026584	50026793	(8590823)	+	AluJb	SINE/Alu	35	235	(77)	1892449
299	35.2	5.8	3.6	chr19	50272762	50272979	(8344637)	+	MIR	SINE/MIR	8	222	(40)	1893156
2453	10.7	0.0	0.0	chr19	50273009	50273318	(8344298)	+	AluSz6	SINE/Alu	1	310	(2)	1893157
2239	12.0	0.0	0.0	chr19	50304308	50304599	(8313017)	+	AluSx1	SINE/Alu	1	292	(20)	1893239
366	28.2	3.5	4.3	chr19	50716021	50716135	(7901481)	C	MIR3	SINE/MIR	(60)	148	35	1894153
180	34.7	12.9	5.1	chr19	50891067	50891300	(7726316)	C	MIR	SINE/MIR	(3)	259	5	1894528
25	14.4	0.0	0.0	chr19	50891521	50891560	(7726056)	+	(TG)n	Simple_repeat	1	40	(0)	1894529
2152	12.0	0.3	0.0	chr19	50891579	50891870	(7725746)	C	AluSp	SINE/Alu	(20)	293	1	1894530
456	22.2	0.7	3.6	chr19	50927617	50927756	(7689860)	C	L1M5	LINE/L1	(965)	5479	5344	1894619
1596	20.3	6.9	4.5	chr19	50927788	50928210	(7689406)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	34	1894621
87	27.5	4.3	2.6	chr19	51688644	51689110	(6928506)	+	GA-rich	Low_complexity	1	475	(0)	1896048
96	28.0	5.8	1.5	chr19	51691175	51691606	(6926010)	+	GA-rich	Low_complexity	1	457	(0)	1896055
437	32.4	3.0	0.4	chr19	53558818	53560405	(5057211)	+	(AC)n	Simple_repeat	1	1636	(0)	1899574
11870	20.5	5.7	3.0	chr19	54568509	54571051	(4046565)	+	ERVL-B4-int	LTR/ERVL	15	2629	(3085)	1902009
583	21.6	0.7	0.7	chr19	54873467	54873601	(3744015)	+	L1PB4	LINE/L1	6022	6156	(0)	1902431
415	26.2	3.0	5.8	chr19	55434086	55434259	(3183357)	+	MER112	DNA/hAT-Charlie	1	169	(92)	1903728
585	6.4	8.3	0.2	chr19	55434264	55435426	(3182190)	+	(GT)n	Simple_repeat	1	1260	(0)	1903729
31	22.5	6.0	1.6	chr19	55466127	55466206	(3151410)	+	(TCTA)n	Simple_repeat	1	84	(0)	1903786
1008	16.2	5.0	1.6	chr19	56076280	56076473	(2541143)	+	L1MB5	LINE/L1	5961	6161	(13)	1905058
484	26.9	18.5	0.6	chr19	56266037	56266204	(2351412)	+	MIR	SINE/MIR	44	248	(14)	1905495
52	2.1	0.0	0.0	chr19	56595840	56595888	(2021728)	+	(TG)n	Simple_repeat	1	49	(0)	1906050
38964	6.7	2.3	0.1	chr19	57195090	57199946	(1417670)	C	HERVL-int	LTR/ERVL	(2)	5652	688	1907416
3268	11.4	0.2	0.7	chr19	57694338	57694797	(922819)	C	LTR71A	LTR/ERV1	(0)	459	2	1908171
2509	9.0	0.0	0.0	chr19	57694971	57695280	(922336)	+	AluSx	SINE/Alu	1	310	(2)	1908172
2505	6.1	0.0	0.7	chr19	57763667	57763963	(853653)	+	AluY	SINE/Alu	1	295	(16)	1908279
2435	31.4	5.8	6.0	chr19	57763964	57764480	(853136)	+	PRIMAX-int	LTR/ERV1	1710	2232	(1870)	1908278
400	36.3	8.8	1.1	chr19	58181731	58182087	(435529)	+	L1M5	LINE/L1	4061	4447	(1699)	1909056
1989	8.0	0.7	8.9	chr19	58184282	58184595	(433021)	C	AluSx	SINE/Alu	(4)	308	21	1909057
7249	11.3	1.5	0.0	chr19	58251074	58252143	(365473)	C	HERV4_I-int	LTR/ERV1	(275)	6264	5179	1909196
5296	14.0	4.1	3.2	chr19	58252139	58252808	(364808)	C	HERV4_I-int	LTR/ERV1	(2443)	2572	1551	1909196
1506	27.3	4.5	2.9	chr2	3267103	3267691	(238925838)	+	ERVL-B4-int	LTR/ERVL	2040	2638	(3076)	1914248
611	20.9	9.2	4.3	chr2	3267698	3267882	(238925647)	+	MER58C	DNA/hAT-Charlie	19	213	(2)	1914249
28	0.0	0.0	0.0	chr2	3738541	3738570	(238454959)	+	(A)n	Simple_repeat	1	30	(0)	1914900
43756	7.8	1.3	0.4	chr2	4057206	4062808	(238130721)	+	HERVL-int	LTR/ERVL	1	5654	(0)	1915261
397	29.2	15.9	2.6	chr2	9521869	9522139	(232671390)	+	LTR79	LTR/ERVL	214	527	(0)	1923098
614	26.4	14.5	3.0	chr2	9522142	9522438	(232671091)	+	L1ME4b	LINE/L1	551	887	(5)	1923099
256	25.8	0.0	1.3	chr2	12931498	12931564	(229261965)	C	L2b	LINE/L2	(4)	3422	3308	1929125
662	14.2	7.8	1.4	chr2	20164657	20166296	(222027233)	+	(AC)n	Simple_repeat	1	1768	(0)	1939874
2185	22.1	6.9	3.0	chr2	21360669	21361111	(220832418)	+	ERVL-B4-int	LTR/ERVL	2340	2813	(2901)	1941636
1665	30.7	7.7	3.6	chr2	27007145	27008111	(215185418)	C	MER110-int	LTR/ERV1	(3797)	850	151	1951043
11	21.8	4.4	2.1	chr2	27307170	27307214	(214886315)	+	(GCCGAGG)n	Simple_repeat	1	47	(0)	1951555
202	28.9	17.8	0.0	chr2	27719971	27720067	(214473462)	+	L2c	LINE/L2	3270	3387	(0)	1952345
40	4.8	0.0	0.0	chr2	27720178	27720220	(214473309)	+	(GT)n	Simple_repeat	1	43	(0)	1952346
218	29.0	4.6	0.0	chr2	28990799	28990860	(213202669)	C	MIR3	SINE/MIR	(11)	197	133	1954623
6496	26.1	4.3	5.3	chr2	38249700	38251807	(203941722)	+	ERV3-16A3_I-int	LTR/ERVL	3121	5206	(20)	1968891
1106	26.2	8.9	5.7	chr2	38251829	38252249	(203941280)	+	LTR16	LTR/ERVL	3	438	(0)	1968891
60	1.8	0.0	0.0	chr2	39783555	39783610	(202409919)	+	(AC)n	Simple_repeat	1	56	(0)	1971743
243	25.0	1.6	0.0	chr2	39783622	39783681	(202409848)	+	MLT1N2	LTR/ERVL-MaLR	502	562	(0)	1971744
192	26.8	5.1	0.0	chr2	42907808	42907863	(199285666)	C	MIR3	SINE/MIR	(1)	207	149	1976527
582	23.4	14.7	0.0	chr2	42908056	42908175	(199285354)	+	MLT1L	LTR/ERVL-MaLR	165	296	(314)	1976528
1586	18.9	1.6	2.6	chr2	42908176	42908481	(199285048)	+	AluJb	SINE/Alu	1	303	(9)	1976529
665	13.0	5.5	0.4	chr2	46877569	46878864	(195314665)	+	(CA)n	Simple_repeat	1	1367	(0)	1982979
1386	31.9	1.5	1.5	chr2	48062805	48063275	(194130254)	+	ERVL-E-int	LTR/ERVL	2215	2685	(2982)	1985295
840	26.1	5.2	3.3	chr2	48063285	48063778	(194129751)	C	MLT1G3	LTR/ERVL-MaLR	(7)	588	11	1985303
2032	21.6	2.4	2.1	chr2	54692123	54692544	(187500985)	+	MSTB	LTR/ERVL-MaLR	4	426	(0)	1994693
1080	27.2	14.9	7.0	chr2	54756737	54758015	(187435514)	C	HAL1	LINE/L1	(1076)	1431	34	1994795
388	31.2	12.4	1.9	chr2	54782788	54783012	(187410517)	+	MIRb	SINE/MIR	15	268	(0)	1994836
11488	19.0	4.0	2.8	chr2	55973485	55975858	(186217671)	C	ERVL-B4-int	LTR/ERVL	(2358)	2868	551	1996830
55	0.0	0.0	0.0	chr2	58617764	58617810	(183575719)	+	(AC)n	Simple_repeat	1	47	(0)	2000041
16	0.0	0.0	0.0	chr2	58618011	58618028	(183575501)	+	(TG)n	Simple_repeat	1	18	(0)	2000042
60	10.4	1.1	0.0	chr2	58618029	58618123	(183575406)	+	(TA)n	Simple_repeat	1	96	(0)	2000043
314	28.6	7.5	4.2	chr2	67995282	67995449	(174198080)	+	MER103C	DNA/hAT-Charlie	67	240	(57)	2014885
5638	19.4	5.1	1.9	chr2	67995515	67996811	(174196718)	+	Charlie1a	DNA/hAT-Charlie	1	1340	(115)	2014886
328	27.0	3.9	0.0	chr2	68088344	68088443	(174105086)	+	MIRb	SINE/MIR	124	227	(41)	2015017
1093	20.6	5.8	6.0	chr2	72254172	72254556	(169938973)	+	MLT1D	LTR/ERVL-MaLR	34	467	(0)	2021800
2520	24.7	5.2	6.2	chr2	72254557	72255898	(169937631)	+	MLT1D-int	LTR/ERVL-MaLR	1	1489	(0)	2021800
47	0.0	0.0	0.0	chr2	84956898	84956940	(157236589)	+	(TCAC)n	Simple_repeat	1	43	(0)	2039770
390	22.0	14.2	0.0	chr2	84956944	84957034	(157236495)	C	L2c	LINE/L2	(0)	3387	3282	2039771
2031	12.3	0.3	2.3	chr2	84957036	84957335	(157236194)	C	AluJb	SINE/Alu	(18)	294	1	2039772
2574	6.1	0.0	0.3	chr2	85651711	85652020	(156541509)	C	AluY	SINE/Alu	(0)	311	3	2041225
1953	25.6	4.3	6.9	chr2	85652021	85652391	(156541138)	C	ERVL-E-int	LTR/ERVL	(2900)	2767	2409	2041224
1577	14.3	11.0	0.0	chr2	85652392	85652657	(156540872)	+	AluJo	SINE/Alu	3	301	(11)	2041226
53	0.0	0.0	0.0	chr2	85742721	85742765	(156450764)	+	(TG)n	Simple_repeat	1	45	(0)	2041418
10122	6.9	1.3	0.1	chr2	100713390	100714664	(141478865)	+	HERVL-int	LTR/ERVL	1898	3188	(2466)	2058397
402	34.2	17.0	2.0	chr2	102512308	102512701	(139680828)	+	L3	LINE/CR1	3605	4069	(30)	2061171
42228	6.7	1.3	0.2	chr2	104587936	104593528	(137600001)	C	HERVL-int	LTR/ERVL	(0)	5654	1	2063734
5706	25.1	5.3	5.2	chr2	105129457	105130953	(137062576)	C	ERV3-16A3_I-int	LTR/ERVL	(1398)	3828	2346	2064442
1993	17.8	2.5	1.4	chr2	105130954	105131313	(137062216)	+	MLT1A0	LTR/ERVL-MaLR	1	364	(1)	2064444
180	28.9	14.3	2.6	chr2	113301518	113301634	(128891895)	C	Tigger19b	DNA/TcMar-Tigger	(174)	376	244	2076577
1224	32.3	5.7	2.6	chr2	120619874	120620982	(121572547)	C	ERVL-B4-int	LTR/ERVL	(2270)	3444	2143	2087289
8504	20.4	2.7	2.4	chr2	123494320	123495814	(118697715)	+	ERVL-B4-int	LTR/ERVL	2026	3518	(2196)	2091836
38995	11.5	1.6	0.8	chr2	126071487	126075349	(116118180)	+	HERVL-int	LTR/ERVL	1	3911	(1743)	2095437
44431	7.2	1.6	0.1	chr2	126646416	126651983	(115541546)	C	HERVL-int	LTR/ERVL	(0)	5654	1	2096188
20520	16.6	3.1	2.1	chr2	129398200	129400434	(112793095)	+	ERVL-B4-int	LTR/ERVL	565	2829	(2885)	2100399
1946	20.5	4.3	5.9	chr2	130189001	130189492	(112004037)	C	LTR42	LTR/ERVL	(11)	484	1	2101470
1984	18.7	5.0	6.5	chr2	131485198	131485689	(110707840)	+	LTR42	LTR/ERVL	1	484	(11)	2103361
10678	25.1	7.4	2.9	chr2	133962531	133966928	(108226601)	+	ERVL-B4-int	LTR/ERVL	1020	5713	(1)	2106719
33446	7.9	0.8	1.0	chr2	137514587	137518957	(104674572)	+	HERVL-int	LTR/ERVL	1	4362	(1292)	2112196
43868	7.7	0.6	0.6	chr2	139211212	139214597	(102978932)	+	HERVL-int	LTR/ERVL	2265	5652	(2)	2114532
1256	11.0	0.6	0.0	chr2	142124036	142124217	(100069312)	C	L1PA14	LINE/L1	(1)	6160	5978	2118366
2428	34.2	8.0	2.5	chr2	146450637	146452060	(95741469)	C	ERVL-E-int	LTR/ERVL	(2343)	3324	1816	2123940
30442	10.2	1.1	0.1	chr2	146775208	146780811	(95412718)	+	HERVL-int	LTR/ERVL	1	5653	(1)	2124334
2497	9.5	5.1	0.3	chr2	148253645	148253983	(93939546)	C	LTR18A	LTR/ERVL	(0)	357	2	2126382
34148	15.6	0.6	0.8	chr2	148253986	148259246	(93934283)	C	HERVL18-int	LTR/ERVL	(0)	6047	794	2126382
29909	7.8	0.5	0.2	chr2	150830379	150836013	(91357516)	C	HERVL-int	LTR/ERVL	(0)	5654	1	2129931
25737	17.1	4.0	2.1	chr2	155923046	155927646	(86265883)	C	ERVL-int	LTR/ERVL	(1067)	4690	2	2136752
3779	11.3	14.3	0.1	chr2	159127125	159127880	(83065649)	+	L1PA8A	LINE/L1	5304	6168	(0)	2141158
787	8.3	0.0	0.0	chr2	160414767	160414862	(81778667)	+	AluSz6	SINE/Alu	203	298	(14)	2143050
326	29.6	0.6	8.7	chr2	160695276	160695515	(81498014)	C	L2b	LINE/L2	(264)	3111	2888	2143450
525	29.0	7.1	6.1	chr2	161070898	161071161	(81122368)	+	MLT1I	LTR/ERVL-MaLR	7	273	(138)	2143921
481	20.6	0.0	1.1	chr2	161071174	161071266	(81122263)	+	MLT1I	LTR/ERVL-MaLR	320	411	(0)	2143921
2119	28.1	9.7	3.6	chr2	162080418	162081418	(80112111)	C	ERVL-E-int	LTR/ERVL	(2459)	3208	2047	2145203
37437	8.2	0.6	0.8	chr2	164172211	164177131	(78016398)	C	HERVL-int	LTR/ERVL	(0)	5654	743	2147989
399	27.1	8.3	1.8	chr2	164561644	164561812	(77631717)	+	MIRb	SINE/MIR	40	220	(48)	2148447
1548	20.3	0.0	1.9	chr2	165430634	165430899	(76762630)	C	AluJr4	SINE/Alu	(30)	282	22	2149645
410	12.3	0.0	0.0	chr2	165430931	165430995	(76762534)	C	L1PA8	LINE/L1	(9)	6163	6099	2149646
54	10.2	1.2	0.0	chr2	165431016	165431100	(76762429)	+	(TCTC)n	Simple_repeat	1	86	(0)	2149647
1192	21.2	0.8	2.4	chr2	165431101	165431351	(76762178)	C	Charlie1a	DNA/hAT-Charlie	(1208)	247	1	2149643
26871	14.3	1.7	0.6	chr2	168258541	168263450	(73930079)	+	ERVL-B4-int	LTR/ERVL	650	5654	(0)	2153298
1270	17.2	14.6	1.5	chr2	168504129	168504389	(73689140)	+	AluJo	SINE/Alu	1	301	(11)	2153648
2399	33.7	4.7	5.7	chr2	168504390	168504784	(73688745)	C	PRIMA4-int	LTR/ERV1	(4502)	3768	3365	2153646
1895	15.3	4.9	0.9	chr2	172260645	172260974	(69932555)	+	MER2	DNA/TcMar-Tigger	2	345	(0)	2159889
806	19.7	7.2	0.7	chr2	173935099	173935240	(68258289)	+	FRAM	SINE/Alu	1	152	(24)	2162402
52	2.1	0.0	0.0	chr2	176136151	176136199	(66057330)	+	(AC)n	Simple_repeat	1	49	(0)	2165692
36	22.4	6.3	3.5	chr2	176136222	176136380	(66057149)	+	GA-rich	Low_complexity	1	169	(0)	2165693
15	5.6	0.0	0.0	chr2	176942399	176942417	(65251112)	+	(TA)n	Simple_repeat	1	19	(0)	2166850
682	16.9	3.9	2.6	chr2	176942744	176942895	(65250634)	C	Eulor6A	DNA?	(0)	248	95	2166851
78	9.9	6.8	3.2	chr2	177313260	177313436	(64880093)	+	(TTCC)n	Simple_repeat	1	189	(0)	2167456
962	19.1	2.5	0.0	chr2	177313447	177313603	(64879926)	C	AluJb	SINE/Alu	(16)	296	136	2167457
25975	10.3	3.6	2.5	chr2	182394507	182396445	(59797084)	+	HERVL-int	LTR/ERVL	1895	3905	(1749)	2173887
22026	8.9	0.7	0.8	chr2	187181799	187182201	(55011328)	C	HERVL-int	LTR/ERVL	(2701)	2953	2564	2180066
14202	8.0	1.2	0.4	chr2	187182201	187184155	(55009374)	C	HERVL-int	LTR/ERVL	(3683)	1971	1	2180066
5396	29.4	8.2	3.8	chr2	197313677	197316196	(44877333)	+	ERVL-E-int	LTR/ERVL	1331	4092	(1575)	2193758
1771	13.2	6.3	3.8	chr2	198123674	198123965	(44069564)	+	MER1B	DNA/hAT-Charlie	36	335	(4)	2195069
414	8.9	0.0	0.0	chr2	198123969	198124024	(44069505)	+	MLT1B	LTR/ERVL-MaLR	335	390	(0)	2195068
1472	21.1	4.3	5.0	chr2	199093364	199093762	(43099767)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2196387
2645	29.5	4.2	2.7	chr2	200268594	200269747	(41923782)	C	HERV16-int	LTR/ERVL	(3824)	1172	1	2198068
190	32.4	5.5	0.0	chr2	200465022	200465089	(41728440)	C	L2b	LINE/L2	(0)	3375	3304	2198375
978	29.1	4.3	0.5	chr2	200465136	200465450	(41728079)	C	MER102a	DNA/hAT-Charlie	(16)	325	1	2198376
13224	14.7	2.4	1.4	chr2	201567836	201569900	(40623629)	C	ERVL-B4-int	LTR/ERVL	(2541)	3173	1084	2200247
1478	34.2	8.9	4.6	chr2	204400944	204401657	(37791872)	C	ERVL-E-int	LTR/ERVL	(2776)	2891	2158	2205573
508	32.6	4.5	5.7	chr2	205741092	205741580	(36451949)	C	L2b	LINE/L2	(30)	3345	2685	2207355
759	28.5	8.7	0.9	chr2	205741763	205741985	(36451544)	C	MIRc	SINE/MIR	(9)	259	18	2207356
517	32.4	6.0	1.4	chr2	206869785	206870026	(35323503)	C	MIRb	SINE/MIR	(6)	262	5	2209254
418	7.0	0.0	0.0	chr2	206870048	206870104	(35323425)	+	L1PA10	LINE/L1	6099	6155	(13)	2209255
527	22.6	15.6	0.0	chr2	206870131	206870276	(35323253)	C	MIRb	SINE/MIR	(29)	239	67	2209256
3605	20.8	9.7	8.3	chr2	207737859	207738012	(34455517)	C	Charlie1a	DNA/hAT-Charlie	(181)	1274	1116	2210590
332	12.5	0.0	3.0	chr2	207738013	207738078	(34455451)	C	L1PA16	LINE/L1	(0)	6166	6103	2210592
3605	20.8	9.7	8.3	chr2	207738079	207738208	(34455321)	C	Charlie1a	DNA/hAT-Charlie	(340)	1115	1000	2210590
2364	9.9	0.3	0.6	chr2	207738209	207738520	(34455009)	C	AluSx	SINE/Alu	(1)	311	1	2210593
31012	7.9	0.6	0.5	chr2	212440549	212446198	(29747331)	+	HERVL-int	LTR/ERVL	1	5654	(0)	2216965
1632	32.4	7.1	7.1	chr2	212805252	212806356	(29387173)	+	ERV3-16A3_I-int	LTR/ERVL	1841	2997	(2229)	2217448
42816	8.2	1.4	0.0	chr2	213469597	213474750	(28718779)	C	HERVL-int	LTR/ERVL	(423)	5231	2	2218260
26	19.2	0.0	0.0	chr2	215397287	215397340	(26796189)	+	(CCTC)n	Simple_repeat	1	54	(0)	2221027
19	9.1	5.4	2.6	chr2	215975000	215975036	(26218493)	+	(TA)n	Simple_repeat	1	39	(0)	2221936
1976	14.0	2.3	0.3	chr2	216501723	216502015	(25691514)	C	AluSz	SINE/Alu	(13)	299	1	2222858
539	29.0	10.8	0.4	chr2	216510740	216511053	(25682476)	+	ERVL-E-int	LTR/ERVL	1980	2278	(3389)	2222877
479	28.2	3.1	3.7	chr2	216511105	216511266	(25682263)	+	ERVL-E-int	LTR/ERVL	2487	2647	(3007)	2222877
338	13.1	4.5	9.7	chr2	216511286	216511378	(25682151)	+	Charlie1b	DNA/hAT-Charlie	323	410	(113)	2222878
1761	15.7	3.8	1.4	chr2	219369321	219369606	(22823923)	+	AluJb	SINE/Alu	2	294	(18)	2227802
34	0.0	0.0	0.0	chr2	219369609	219369637	(22823892)	+	(AC)n	Simple_repeat	1	29	(0)	2227803
445	32.6	0.0	0.0	chr2	219369684	219369812	(22823717)	C	ERV3-16A3_I-int	LTR/ERVL	(3812)	1414	1286	2227804
1310	14.2	6.6	0.5	chr2	219648388	219648600	(22544929)	+	L1PA8	LINE/L1	5946	6172	(0)	2228265
434	26.2	3.3	1.4	chr2	221098451	221098597	(21094932)	C	Arthur1B	DNA/hAT-Tip100	(873)	352	203	2230526
29817	6.2	1.2	0.0	chr2	222435480	222439361	(19754168)	C	HERVL-int	LTR/ERVL	(0)	5654	1727	2232599
1063	25.3	10.3	2.5	chr2	231886164	231886398	(10307131)	C	MLT1J1	LTR/ERVL-MaLR	(4)	440	180	2247835
30	8.5	1.9	1.9	chr2	234509694	234509745	(7683784)	+	(CT)n	Simple_repeat	1	53	(0)	2252090
176	25.8	0.9	1.3	chr2	234682847	234683303	(7510226)	+	(GTG)n	Simple_repeat	1	461	(0)	2252370
328	15.2	1.7	0.0	chr2	236190608	236190666	(6002863)	+	MER5A1	DNA/hAT-Charlie	68	127	(39)	2254642
484	24.2	7.3	5.0	chr2	236191139	236191299	(6002230)	C	MamRep488	DNA/hAT-Tip100	(0)	219	55	2254643
264	23.9	5.3	1.4	chr2	236718404	236718475	(5475054)	+	MER5B	DNA/hAT-Charlie	91	165	(13)	2255397
189	28.0	0.0	0.0	chr2	236724068	236724117	(5469412)	+	L2a	LINE/L2	3355	3404	(22)	2255408
527	27.7	2.0	0.0	chr2	236724222	236724369	(5469160)	C	MER5A1	DNA/hAT-Charlie	(14)	152	2	2255409
15298	20.4	3.9	2.2	chr2	237243990	237247012	(4946517)	C	HERVL-int	LTR/ERVL	(1)	5653	2578	2256129
756	14.7	3.0	0.0	chr2	237247001	237247129	(4946400)	C	ERVL-B4-int	LTR/ERVL	(4578)	1136	1004	2256130
7794	2.6	0.1	0.0	chr2	237247141	237248766	(4944763)	C	L1PA3	LINE/L1	(0)	6155	4528	2256131
953	31.0	7.3	4.0	chr2	237477803	237478330	(4715199)	C	ERVL-E-int	LTR/ERVL	(2609)	3058	2404	2256415
1888	32.2	3.6	2.1	chr2	237478352	237479142	(4714387)	C	ERVL-E-int	LTR/ERVL	(3758)	1909	1107	2256415
1977	32.6	2.7	0.3	chr2	240884582	240885317	(1308212)	C	ERVL-E-int	LTR/ERVL	(2619)	3048	2295	2260484
357	30.3	3.3	3.3	chr2	240990043	240990192	(1203337)	+	MIRb	SINE/MIR	89	238	(30)	2260563
427	19.3	11.9	0.0	chr2	240990377	240990495	(1203034)	C	MIR3	SINE/MIR	(0)	208	74	2260564
2114	10.6	0.0	5.0	chr2	240990545	240990570	(1202959)	C	AluSx1	SINE/Alu	(7)	305	280	2260565
32	0.0	0.0	0.0	chr2	240990571	240990600	(1202929)	+	(TGTTT)n	Simple_repeat	1	30	(0)	2260566
2114	10.6	0.0	5.0	chr2	240990601	240990894	(1202635)	C	AluSx1	SINE/Alu	(33)	279	1	2260565
547	16.8	6.8	0.3	chr2	241516412	241517740	(675789)	+	(CA)n	Simple_repeat	1	1419	(0)	2261255
1101	20.2	13.9	5.4	chr20	1323600	1323913	(63120254)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	2264806
228	14.8	12.9	0.0	chr20	1323985	1324038	(63120129)	C	L2b	LINE/L2	(1)	3374	3313	2264807
299	32.0	9.6	8.3	chr20	1324025	1324351	(63119816)	+	L2b	LINE/L2	3044	3375	(0)	2264808
397	31.6	4.1	5.4	chr20	3678678	3678898	(60765269)	+	MIRc	SINE/MIR	12	229	(39)	2269295
323	17.2	4.5	0.0	chr20	3679057	3679120	(60765047)	+	Arthur1B	DNA/hAT-Tip100	70	136	(1089)	2269296
19	16.9	0.0	0.0	chr20	3679122	3679154	(60765013)	+	(T)n	Simple_repeat	1	33	(0)	2269297
343	36.6	5.6	6.1	chr20	3804094	3804486	(60639681)	+	L2	LINE/L2	2484	2874	(545)	2269525
12	19.6	2.9	0.0	chr20	4089149	4089183	(60354984)	+	(CAAGTG)n	Simple_repeat	1	36	(0)	2270096
179	26.5	0.4	1.1	chr20	4089310	4089737	(60354430)	+	(AT)n	Simple_repeat	1	425	(0)	2270097
2460	10.0	0.3	0.0	chr20	5490086	5490395	(58953772)	C	AluSp	SINE/Alu	(1)	312	2	2272634
3677	28.7	4.4	1.8	chr20	5490396	5490856	(58953311)	C	ERVL-E-int	LTR/ERVL	(3042)	2625	2153	2272633
14343	17.5	3.3	1.1	chr20	8836475	8839500	(55604667)	+	ERVL-B4-int	LTR/ERVL	5	3155	(2559)	2277907
253	26.2	10.8	0.9	chr20	17536771	17536886	(46907281)	+	MIR3	SINE/MIR	48	183	(25)	2291057
620	19.0	11.7	0.0	chr20	17536887	17537007	(46907160)	+	MLT1B	LTR/ERVL-MaLR	1	137	(253)	2291058
315	8.7	2.1	0.0	chr20	17537004	17537049	(46907118)	+	MLT1B	LTR/ERVL-MaLR	344	390	(0)	2291059
22738	13.8	2.4	1.5	chr20	25124983	25128147	(39316020)	+	ERVL-B4-int	LTR/ERVL	2312	5505	(209)	2301738
252	6.8	18.5	0.0	chr20	25407154	25407197	(39036970)	+	MIR	SINE/MIR	79	132	(130)	2302119
1719	10.3	11.3	5.0	chr20	34537986	34538267	(29905900)	C	AluJo	SINE/Alu	(10)	302	1	2313285
576	28.1	8.8	0.4	chr20	38583143	38583381	(25860786)	C	MIRb	SINE/MIR	(0)	268	8	2322418
615	25.7	7.9	0.0	chr20	38583334	38583520	(25860647)	+	MIR	SINE/MIR	36	238	(24)	2322419
232	20.9	8.2	4.3	chr20	38902196	38902265	(25541902)	C	L2c	LINE/L2	(0)	3387	3315	2323120
189	32.8	3.8	11.1	chr20	38902291	38902434	(25541733)	C	L2c	LINE/L2	(253)	3173	3041	2323120
68	2.8	1.4	0.0	chr20	45139724	45139796	(19304371)	+	(TCTA)n	Simple_repeat	1	74	(0)	2335100
14	4.9	0.0	0.0	chr20	45139797	45139817	(19304350)	+	(ATC)n	Simple_repeat	1	21	(0)	2335101
21608	6.4	0.9	0.3	chr20	45139878	45142525	(19301642)	C	HERVL-int	LTR/ERVL	(2989)	2665	1	2335102
2184	13.8	0.0	0.3	chr20	48273576	48273880	(16170287)	C	AluSx	SINE/Alu	(4)	308	5	2341790
200	27.4	4.6	1.6	chr20	48274108	48274170	(16169997)	+	MIR1_Amn	SINE/MIR	77	141	(89)	2341791
13	15.2	0.0	3.2	chr20	48274218	48274248	(16169919)	+	(TTATT)n	Simple_repeat	1	31	(0)	2341792
250	25.9	5.5	0.0	chr20	48274251	48274335	(16169832)	C	Charlie15a	DNA/hAT-Charlie	(17)	207	118	2341793
1913	27.7	1.4	1.8	chr20	48611470	48612072	(15832095)	C	ERVL-B4-int	LTR/ERVL	(2923)	2791	2021	2342451
486	25.5	5.0	7.3	chr20	52791324	52791488	(11652679)	+	MIRb	SINE/MIR	81	241	(27)	2352198
12	22.3	0.0	7.4	chr20	54185036	54185089	(10259078)	+	(CACACC)n	Simple_repeat	1	54	(0)	2355223
428	33.6	11.2	4.0	chr20	58509829	58510309	(5933858)	+	L2c	LINE/L2	2823	3367	(8)	2363053
2200	10.3	3.0	0.0	chr20	58510342	58510631	(5933536)	C	AluSx1	SINE/Alu	(13)	299	1	2363054
659	27.2	4.2	0.0	chr20	59103014	59103197	(5340970)	+	MIR	SINE/MIR	33	224	(38)	2363936
409	27.1	12.2	0.0	chr20	59103247	59103390	(5340777)	C	L2c	LINE/L2	(170)	3217	3054	2363937
388	33.0	7.0	0.0	chr20	59103456	59103628	(5340539)	C	L2a	LINE/L2	(8)	3418	3233	2363938
18	4.2	4.0	0.0	chr20	59645674	59645698	(4798469)	+	(TG)n	Simple_repeat	1	26	(0)	2364808
292	25.8	0.0	0.0	chr20	59645808	59645873	(4798294)	+	L2b	LINE/L2	3361	3426	(0)	2364804
418	24.8	2.3	3.0	chr20	61603663	61603795	(2840372)	C	L2c	LINE/L2	(178)	3209	3078	2367566
14	21.7	3.0	5.9	chr20	61603930	61603995	(2840172)	+	(CACATG)n	Simple_repeat	1	68	(0)	2367568
481	31.8	2.9	3.4	chr20	61916292	61916496	(2527671)	+	MIRb	SINE/MIR	54	257	(11)	2367897
22	22.6	0.0	0.0	chr20	61916507	61916558	(2527609)	+	(TCA)n	Simple_repeat	1	52	(0)	2367898
2055	12.2	2.7	1.4	chr20	63632640	63632933	(811234)	+	AluSx	SINE/Alu	1	298	(14)	2369800
741	29.7	4.7	5.0	chr20	63632936	63633250	(810917)	C	ERV24B_Prim-int	LTR/ERV1	(4375)	3238	2916	2369801
2311	12.1	0.0	0.0	chr20	63633251	63633557	(810610)	C	AluSq2	SINE/Alu	(6)	307	1	2369802
227	8.8	0.0	0.0	chr20	64126578	64126611	(317556)	C	L1MC	LINE/L1	(1369)	4777	4744	2370530
227	8.8	0.0	0.0	chr20	64126730	64126763	(317404)	C	L1MC	LINE/L1	(1369)	4777	4744	2370530
249	2.9	0.0	0.0	chr20	64126768	64126801	(317366)	C	L1MC	LINE/L1	(1369)	4777	4744	2370530
41668	8.1	1.7	1.9	chr21	15576961	15582627	(31127356)	+	HERVL-int	LTR/ERVL	1	5654	(0)	2379318
36592	15.4	2.4	2.0	chr21	23963718	23969659	(22740324)	C	HERVL18-int	LTR/ERVL	(0)	6047	82	2390441
443	23.1	5.3	2.7	chr21	26114510	26114620	(20595363)	+	MLT1F	LTR/ERVL-MaLR	132	245	(324)	2393530
227	27.6	6.5	0.0	chr21	26114612	26114669	(20595314)	C	MER81	DNA/hAT-Blackjack	(52)	62	1	2393531
23922	7.7	1.2	0.3	chr21	27316674	27320145	(19389838)	C	HERVL-int	LTR/ERVL	(2085)	3569	1	2395254
2638	21.1	1.6	6.1	chr21	27502287	27502861	(19207122)	+	L1MD	LINE/L1	3313	3854	(2292)	2395509
26061	8.9	0.7	0.4	chr21	28850807	28854444	(17855539)	C	HERVL-int	LTR/ERVL	(2002)	3652	1	2397344
437	16.6	6.8	1.3	chr21	29147164	29148306	(17561677)	+	(CTGTAT)n	Simple_repeat	1	1221	(0)	2397843
2540	17.3	3.4	1.7	chr21	29362586	29363044	(17346939)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	2398181
17	31.3	3.4	1.1	chr21	29363079	29363166	(17346817)	+	(CTCTC)n	Simple_repeat	1	91	(0)	2398182
1567	29.4	11.7	6.4	chr21	31752317	31753357	(14956626)	C	ERVL-E-int	LTR/ERVL	(2418)	3249	2147	2401999
975	27.9	5.2	1.0	chr21	31848450	31848836	(14861147)	C	ERV3-16A3_I-int	LTR/ERVL	(4698)	528	125	2402189
430	23.9	2.2	0.0	chr21	31848992	31849079	(14860904)	C	LTR16B2	LTR/ERVL	(8)	454	365	2402190
152	2.8	0.0	0.0	chr21	32771844	32771990	(13937993)	+	(GA)n	Simple_repeat	1	147	(0)	2403728
12	23.7	2.5	0.0	chr21	32772205	32772244	(13937739)	+	GA-rich	Low_complexity	1	41	(0)	2403729
201	35.9	2.3	9.2	chr21	33010662	33010882	(13699101)	+	L2	LINE/L2	2488	2690	(729)	2404157
2641	9.9	1.3	1.0	chr21	33010883	33011271	(13698712)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	2404158
13	13.7	0.0	0.0	chr21	33864246	33864270	(12845713)	+	(TCCA)n	Simple_repeat	1	25	(0)	2405738
395	33.6	6.3	4.5	chr21	33864609	33864873	(12845110)	C	Tigger19a	DNA/TcMar-Tigger	(35)	288	19	2405739
192	24.3	5.4	1.4	chr21	33903679	33903749	(12806234)	+	MIRc	SINE/MIR	193	266	(2)	2405794
245	14.2	4.7	3.0	chr21	33985058	33985073	(12724910)	+	(ACCACAC)n	Simple_repeat	1	601	(0)	2405937
254	7.8	9.5	2.5	chr21	33985074	33985631	(12724352)	+	(AC)n	Simple_repeat	1	611	(0)	2405938
2238	16.4	5.2	0.7	chr21	34185836	34186276	(12523707)	+	MLT1C	LTR/ERVL-MaLR	2	463	(4)	2406239
123	20.8	2.3	1.5	chr21	34740204	34740595	(11969388)	+	(ATCC)n	Simple_repeat	1	395	(0)	2407095
219	29.3	0.0	1.7	chr21	34740619	34740677	(11969306)	C	L2c	LINE/L2	(49)	3338	3281	2407096
2674	18.1	5.3	2.1	chr21	34771338	34771894	(11938089)	C	Tigger7	DNA/TcMar-Tigger	(125)	580	10	2407157
14	21.0	3.3	4.8	chr21	34888319	34888378	(11821605)	+	(CACGC)n	Simple_repeat	1	62	(0)	2407307
17	12.7	0.0	0.0	chr21	34888500	34888525	(11821458)	+	(A)n	Simple_repeat	1	26	(0)	2407308
12	11.1	6.9	0.0	chr21	34933684	34933712	(11776271)	+	(GCACT)n	Simple_repeat	1	31	(0)	2407372
406	31.1	10.0	1.6	chr21	34933941	34934123	(11775860)	+	LTR16D	LTR/ERVL	224	423	(228)	2407373
39	13.3	4.0	0.0	chr21	35047477	35047514	(11662469)	+	(TC)n	Simple_repeat	1	41	(0)	2407529
56	0.0	0.0	0.0	chr21	35047515	35047562	(11662421)	+	(AC)n	Simple_repeat	1	48	(0)	2407530
39	13.3	4.0	0.0	chr21	35047563	35047598	(11662385)	+	(TC)n	Simple_repeat	2	37	(0)	2407531
1423	21.6	9.8	5.3	chr21	35514461	35514896	(11195087)	+	MLT1C	LTR/ERVL-MaLR	1	458	(9)	2408217
1097	19.8	1.4	1.4	chr21	35962755	35962964	(10747019)	C	MER20	DNA/hAT-Charlie	(0)	219	10	2408910
1242	32.8	7.8	2.5	chr21	35962982	35963692	(10746291)	C	HERVL-int	LTR/ERVL	(2938)	2776	2006	2408909
1558	16.2	9.2	0.4	chr21	36122933	36123191	(10586792)	+	AluJb	SINE/Alu	3	286	(26)	2409180
48	1.9	1.9	0.0	chr21	36123192	36123243	(10586740)	+	(AAAT)n	Simple_repeat	1	53	(0)	2409181
207	8.9	0.4	9.2	chr21	36257666	36258115	(10451868)	+	(TAGG)n	Simple_repeat	4	414	(0)	2409464
1744	16.7	3.5	0.0	chr21	36258138	36258412	(10451571)	+	AluJb	SINE/Alu	11	295	(17)	2409465
2469	7.3	0.0	0.0	chr21	36312764	36313063	(10396920)	C	AluY	SINE/Alu	(11)	300	1	2409598
496	28.4	4.7	1.6	chr21	36313092	36313320	(10396663)	C	L1M8	LINE/L1	(1779)	576	326	2409586
51	0.0	0.0	0.0	chr21	37274998	37275043	(9434940)	+	(TTAT)n	Simple_repeat	1	46	(0)	2411281
2347	5.6	0.3	1.1	chr21	37275044	37275328	(9434655)	C	AluSc8	SINE/Alu	(28)	283	1	2411282
3733	25.1	6.5	3.8	chr21	37348195	37349613	(9360370)	C	L1MEg	LINE/L1	(4218)	3332	795	2411435
13	21.7	0.0	0.0	chr21	37366867	37366898	(9343085)	+	(GGC)n	Simple_repeat	1	32	(0)	2411469
27	23.2	0.0	0.0	chr21	37366986	37367047	(9342936)	+	(GCT)n	Simple_repeat	1	62	(0)	2411470
2117	18.7	1.3	1.5	chr21	38461073	38461463	(8248520)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	2413052
274	17.6	3.7	3.1	chr21	38913709	38914463	(7795520)	+	(CACAACA)n	Simple_repeat	1	783	(0)	2413692
35	15.2	1.5	0.0	chr21	38914466	38914531	(7795452)	+	(CTCT)n	Simple_repeat	1	67	(0)	2413693
605	19.6	2.9	4.3	chr21	38996894	38997032	(7712951)	C	L1MC1	LINE/L1	(0)	6333	6197	2413832
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
455	24.8	0.0	0.9	chr21	39479061	39479195	(7230788)	+	FLAM_C	SINE/Alu	2	210	(92)	2414673
172	16.2	0.7	0.3	chr21	39479199	39479507	(7230476)	+	(GTGGTG)n	Simple_repeat	1	311	(0)	2414674
431	29.1	5.0	0.6	chr21	39479514	39479686	(7230297)	C	HAL1	LINE/L1	(1873)	634	454	2414672
67	23.5	4.0	3.0	chr21	39563440	39563665	(7146318)	+	(CCTC)n	Simple_repeat	1	235	(0)	2414812
380	25.2	0.0	1.8	chr21	39563676	39563788	(7146195)	C	L1ME5	LINE/L1	(14)	6180	6070	2414813
3044	28.8	8.6	5.6	chr21	39711829	39714462	(6995521)	C	ERV3-16A3_I-int	LTR/ERVL	(435)	4791	2120	2415065
491	15.8	8.2	1.6	chr21	40138229	40139179	(6570804)	+	(TG)n	Simple_repeat	1	1014	(0)	2415605
21355	17.4	2.2	0.6	chr21	40917868	40921536	(5788447)	+	ERVL-B4-int	LTR/ERVL	28	3756	(1958)	2416715
190	19.1	4.2	5.0	chr21	41150312	41150929	(5559054)	+	(TG)n	Simple_repeat	1	644	(0)	2417034
1798	32.3	7.3	3.5	chr21	41653581	41654524	(5055459)	C	ERV3-16A3_I-int	LTR/ERVL	(2378)	3289	2207	2417809
15	16.9	6.1	1.9	chr21	41766800	41766848	(4943135)	+	(CCCCAG)n	Simple_repeat	1	52	(0)	2417971
417	23.2	9.8	1.4	chr21	42388184	42388323	(4321660)	+	MIRb	SINE/MIR	75	227	(41)	2418807
239	7.4	6.9	0.9	chr21	42439633	42440050	(4269933)	+	(CA)n	Simple_repeat	1	447	(0)	2418874
597	16.2	6.0	2.8	chr21	43604198	43605925	(3104058)	+	(AC)n	Simple_repeat	1	1782	(0)	2420490
3130	16.2	2.5	4.5	chr21	44876429	44877118	(1832865)	+	ERV24B_Prim-int	LTR/ERV1	2299	3273	(4340)	2422273
2201	12.6	1.0	0.0	chr21	44877119	44877420	(1832563)	C	AluSp	SINE/Alu	(8)	305	1	2422275
2330	9.5	0.3	0.0	chr21	44938103	44938396	(1771587)	C	AluSp	SINE/Alu	(18)	295	1	2422345
474	9.7	0.0	0.0	chr21	44938531	44938592	(1771391)	+	AluSz6	SINE/Alu	232	293	(19)	2422346
6630	8.8	1.3	0.1	chr21	45314823	45316564	(1393419)	+	L1PA10	LINE/L1	4395	6163	(5)	2422733
294	19.4	6.9	1.1	chr21	45591254	45592117	(1117866)	+	(CA)n	Simple_repeat	1	924	(0)	2422970
666	29.6	11.6	4.1	chr21	45703531	45704063	(1005920)	C	L2	LINE/L2	(491)	2928	2351	2423109
17	19.3	4.3	0.0	chr21	45996558	45996604	(713379)	+	(CACAGG)n	Simple_repeat	1	49	(0)	2423398
2928	21.9	9.7	2.3	chr21	46094126	46094981	(615002)	C	ERV3-16A3_I-int	LTR/ERVL	(2153)	3073	2148	2423502
3329	16.1	1.8	0.9	chr21	46608052	46608602	(101381)	C	MER41D	LTR/ERV1	(0)	557	2	2424176
2078	29.2	19.2	1.1	chr21	46608603	46609198	(100785)	+	ERVL-B4-int	LTR/ERVL	2328	3025	(2689)	2424175
2079	9.9	0.8	0.0	chr22	19303600	19303862	(31514606)	C	AluSc	SINE/Alu	(34)	275	11	2431764
6924	12.8	2.6	6.9	chr22	19303863	19304075	(31514393)	+	PRIMAX-int	LTR/ERV1	1788	1988	(2114)	2431757
1640	16.3	1.5	1.8	chr22	19304077	19304248	(31514220)	C	AluJo	SINE/Alu	(19)	293	120	2431765
37	7.6	2.7	2.7	chr22	20199436	20199508	(30618960)	+	(ATCC)n	Simple_repeat	1	75	(0)	2433007
113	29.2	1.3	4.4	chr22	20496137	20496610	(30321858)	+	(TCCC)n	Simple_repeat	1	480	(0)	2433428
2201	12.2	0.0	0.0	chr22	21853060	21853354	(28965114)	+	AluSx	SINE/Alu	11	305	(7)	2436050
728	25.1	8.7	2.5	chr22	21853355	21853686	(28964782)	+	L1MD	LINE/L1	3579	3928	(2218)	2436049
2144	12.9	0.3	0.6	chr22	21853687	21853997	(28964471)	+	AluSx3	SINE/Alu	2	311	(0)	2436051
211	23.9	14.5	0.0	chr22	21967161	21967231	(28851237)	+	MIR	SINE/MIR	19	101	(161)	2436284
15315	9.6	1.0	0.8	chr22	22388387	22389982	(28428486)	C	HERVL-int	LTR/ERVL	(1772)	3882	2270	2436807
2405	7.4	0.0	2.6	chr22	22764833	22765143	(28053325)	C	AluY	SINE/Alu	(8)	303	1	2437357
810	30.6	11.2	4.3	chr22	22765144	22765274	(28053194)	C	ERVL-E-int	LTR/ERVL	(2810)	2857	2719	2437356
495	37.8	2.8	0.6	chr22	22765315	22765631	(28052837)	C	ERVL-E-int	LTR/ERVL	(2293)	2703	2380	2437356
12625	8.1	0.2	1.2	chr22	22794422	22794901	(28023567)	+	HERVL-int	LTR/ERVL	2190	2669	(2985)	2437404
2287	10.2	0.0	0.0	chr22	22794902	22795195	(28023273)	C	AluSc	SINE/Alu	(15)	294	1	2437405
29	6.2	5.9	0.0	chr22	23381158	23381208	(27437260)	+	(TGATGG)n	Simple_repeat	1	54	(0)	2438220
52	24.5	1.5	5.5	chr22	23533978	23534173	(27284295)	+	G-rich	Low_complexity	1	199	(0)	2438458
1183	8.0	3.3	6.9	chr22	24010696	24010884	(26807584)	+	MER30	DNA/hAT-Charlie	47	228	(2)	2439357
57	3.6	0.0	0.0	chr22	24011077	24011134	(26807334)	+	(AC)n	Simple_repeat	1	58	(0)	2439358
26	18.8	2.0	0.0	chr22	24011135	24011185	(26807283)	+	(GC)n	Simple_repeat	1	52	(0)	2439359
210	20.6	0.5	0.7	chr22	24633505	24633942	(26184526)	+	(GT)n	Simple_repeat	1	440	(0)	2440381
1180	16.1	0.5	0.5	chr22	25081827	25082012	(25736456)	+	AluJr	SINE/Alu	49	234	(78)	2441423
2063	13.7	0.3	1.3	chr22	25082551	25082856	(25735612)	+	AluJo	SINE/Alu	1	303	(9)	2441424
1550	4.4	0.0	0.0	chr22	26863743	26863924	(23954544)	+	L1PA7	LINE/L1	5629	5810	(344)	2445354
634	24.5	2.7	0.0	chr22	26863930	26864072	(23954396)	C	MIR	SINE/MIR	(70)	192	46	2445352
144	27.3	0.2	0.5	chr22	27018286	27018498	(23799970)	+	(CCAT)n	Simple_repeat	1	212	(0)	2445721
27	6.1	0.0	0.0	chr22	27018499	27018533	(23799935)	+	(CACT)n	Simple_repeat	1	35	(0)	2445722
144	33.8	0.2	0.6	chr22	27018534	27018652	(23799816)	+	(CCAT)n	Simple_repeat	2	119	(0)	2445723
12	15.6	0.0	9.3	chr22	27242474	27242516	(23575952)	+	(CTT)n	Simple_repeat	1	43	(0)	2446276
27	13.7	0.0	0.0	chr22	27242646	27242693	(23575775)	+	(TCTC)n	Simple_repeat	1	48	(0)	2446277
21	17.8	0.0	0.0	chr22	27242819	27242856	(23575612)	+	(CA)n	Simple_repeat	1	38	(0)	2446278
309	21.4	2.3	0.0	chr22	27377732	27377815	(23440653)	C	X7B_LINE	LINE/CR1	(33)	217	132	2446544
15	5.5	0.0	0.0	chr22	27377869	27377887	(23440581)	+	(T)n	Simple_repeat	1	19	(0)	2446545
723	25.3	4.9	0.8	chr22	27377941	27378175	(23440293)	C	MIRb	SINE/MIR	(19)	249	5	2446546
196	31.9	14.2	0.0	chr22	27579128	27579218	(23239250)	C	L2a	LINE/L2	(9)	3417	3312	2447018
17	18.2	10.5	1.2	chr22	27595957	27596032	(23222436)	+	(CTCTTCCTC)n	Simple_repeat	1	84	(0)	2447055
663	29.1	3.7	1.9	chr22	27596094	27596303	(23222165)	+	MIR	SINE/MIR	39	252	(10)	2447056
1730	14.8	7.6	1.4	chr22	30269244	30269527	(20548941)	+	AluJb	SINE/Alu	1	303	(9)	2452266
1225	14.8	8.9	1.9	chr22	30269650	30269848	(20548620)	C	MLT1B	LTR/ERVL-MaLR	(3)	387	173	2452267
2354	9.4	0.0	0.0	chr22	30269849	30270145	(20548323)	C	AluSx	SINE/Alu	(15)	297	1	2452268
478	28.1	2.2	3.2	chr22	30434073	30434253	(20384215)	+	MIRb	SINE/MIR	2	178	(90)	2452603
64	39.0	1.8	0.8	chr22	31629312	31629691	(19188777)	+	(GT)n	Simple_repeat	1	387	(0)	2455232
374	35.0	3.0	1.8	chr22	32177191	32177353	(18641115)	C	MIRb	SINE/MIR	(49)	219	55	2456513
486	22.7	2.8	2.3	chr22	35342702	35344080	(15474388)	+	(CA)n	Simple_repeat	1	1417	(0)	2462749
2452	9.0	0.3	0.3	chr22	35376338	35376647	(15441821)	C	AluSx1	SINE/Alu	(2)	310	1	2462832
20	34.8	2.1	0.0	chr22	35577931	35578023	(15240445)	+	(GGAT)n	Simple_repeat	1	95	(0)	2463340
25	8.4	0.0	0.0	chr22	35578168	35578205	(15240263)	+	(GGAA)n	Simple_repeat	1	38	(0)	2463341
166	10.0	2.6	0.3	chr22	35578218	35578519	(15239949)	+	(TGGA)n	Simple_repeat	1	310	(0)	2463342
2340	8.8	0.0	0.7	chr22	36353907	36354201	(14464267)	C	AluSx3	SINE/Alu	(18)	293	1	2464808
341	25.8	10.8	0.8	chr22	36354222	36354346	(14464122)	C	MIR3	SINE/MIR	(48)	160	22	2464809
14	15.8	0.0	5.1	chr22	37020037	37020075	(13798393)	+	G-rich	Low_complexity	1	39	(0)	2466324
15	17.9	5.0	2.4	chr22	37020112	37020151	(13798317)	+	GA-rich	Low_complexity	1	42	(0)	2466325
227	32.6	8.7	0.0	chr22	37020209	37020303	(13798165)	C	MIRb	SINE/MIR	(3)	265	162	2466326
513	16.7	2.1	10.4	chr22	38461872	38461929	(12356539)	C	L1ME3	LINE/L1	(1)	6161	6112	2469551
1930	10.8	3.4	2.4	chr22	38461930	38462224	(12356244)	+	AluJr	SINE/Alu	2	299	(13)	2469552
207	38.1	0.5	1.5	chr22	39623160	39624212	(11194256)	+	(TG)n	Simple_repeat	1	1058	(0)	2472050
2189	11.1	1.0	0.0	chr22	41163468	41163764	(9654704)	+	AluSx	SINE/Alu	1	300	(12)	2475278
740	21.0	5.0	2.5	chr22	41163766	41163922	(9654546)	+	AluJr4	SINE/Alu	136	296	(16)	2475279
17	16.6	6.4	0.0	chr22	41926171	41926217	(8892251)	+	(CACCAG)n	Simple_repeat	1	50	(0)	2477065
2274	8.5	2.0	0.3	chr22	42857684	42857978	(7960490)	C	AluSx	SINE/Alu	(11)	301	2	2479093
1854	14.2	0.0	4.3	chr22	43019127	43019418	(7799050)	+	AluJb	SINE/Alu	3	284	(28)	2479382
48	0.0	0.0	0.0	chr22	43019419	43019462	(7799006)	+	(AAAT)n	Simple_repeat	1	44	(0)	2479383
582	29.9	2.1	6.1	chr22	43019482	43019727	(7798741)	+	Charlie15b	DNA/hAT-Charlie	148	383	(678)	2479384
284	28.3	6.2	3.2	chr22	43095463	43095586	(7722882)	+	MIRb	SINE/MIR	110	237	(31)	2479576
126	15.1	3.0	0.0	chr22	43095656	43095889	(7722579)	+	(GT)n	Simple_repeat	1	241	(0)	2479577
358	22.8	4.8	0.5	chr22	45290430	45290642	(5527826)	+	(TG)n	Simple_repeat	1	225	(0)	2483632
3705	10.9	1.5	1.1	chr22	45290643	45291169	(5527299)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	2483633
358	22.8	4.8	0.5	chr22	45291170	45291988	(5526480)	+	(TG)n	Simple_repeat	2	854	(0)	2483634
999	19.4	0.0	0.0	chr22	45512757	45512921	(5305547)	C	AluJr	SINE/Alu	(11)	301	137	2484094
19	6.8	3.2	0.0	chr22	45512923	45512953	(5305515)	+	(TTG)n	Simple_repeat	1	32	(0)	2484095
44232	5.5	0.7	0.8	chr22	45556296	45561682	(5256786)	C	HERVL-int	LTR/ERVL	(274)	5380	1	2484161
14271	16.1	3.0	1.4	chr22	45855956	45858440	(4960028)	C	ERVL-B4-int	LTR/ERVL	(1315)	4399	1874	2484654
175	9.5	7.2	0.8	chr22	45980821	45981153	(4837315)	+	(TG)n	Simple_repeat	1	357	(0)	2484827
2500	7.5	0.0	0.0	chr22	45981263	45981567	(4836901)	+	AluY	SINE/Alu	2	306	(5)	2484828
397	27.3	0.3	0.7	chr22	45993237	45994265	(4824203)	+	(TGGTGG)n	Simple_repeat	1	1032	(0)	2484850
452	28.6	14.2	1.6	chr22	46016065	46016249	(4802219)	C	L1M5	LINE/L1	(919)	5227	5016	2484878
240	20.4	1.9	0.6	chr22	47009234	47009754	(3808714)	+	(TCA)n	Simple_repeat	1	531	(0)	2486337
3522	18.7	4.7	1.0	chr22	47406212	47406901	(3411567)	+	MER72	LTR/ERV1	1	717	(5)	2486801
733	31.1	9.0	1.1	chr22	49676017	49676634	(1141834)	C	ERVL-E-int	LTR/ERVL	(2335)	2891	2361	2489623
236	7.6	8.0	3.6	chr22	49975367	49975881	(842587)	+	(GT)n	Simple_repeat	1	537	(0)	2490011
1647	9.2	7.5	2.7	chr22	50337110	50340629	(477839)	+	(GT)n	Simple_repeat	1	3783	(0)	2490482
129	22.1	7.1	1.0	chr22	50628611	50629058	(189410)	+	(GT)n	Simple_repeat	1	480	(0)	2490988
86	22.2	6.5	5.7	chr22	50675414	50675908	(142560)	+	(CAGTGTG)n	Simple_repeat	1	527	(0)	2491078
40399	6.7	1.6	0.5	chr3	3831852	3834492	(194461067)	C	HERVL-int	LTR/ERVL	(2987)	2667	1	2498095
29058	7.0	1.1	0.5	chr3	6009250	6012958	(192282601)	+	HERVL-int	LTR/ERVL	1	3731	(1923)	2501656
685	29.7	5.9	0.5	chr3	10521794	10522016	(187773543)	C	MIRb	SINE/MIR	(9)	259	24	2509590
479	26.2	0.0	0.0	chr3	10522313	10522419	(187773140)	C	MIRb	SINE/MIR	(139)	129	23	2509591
247	20.4	0.0	0.0	chr3	10686913	10686956	(187608603)	C	MIRc	SINE/MIR	(113)	155	112	2509901
672	28.0	3.5	2.2	chr3	10687139	10687363	(187608196)	+	MIRb	SINE/MIR	35	267	(1)	2509902
8818	8.1	18.5	0.1	chr3	11510875	11512160	(186783399)	C	LTR12C	LTR/ERV1	(0)	1579	3	2511585
611	25.9	1.4	0.0	chr3	12477075	12477217	(185818342)	+	MIR	SINE/MIR	49	193	(69)	2513340
188	39.2	4.4	0.7	chr3	12477349	12477502	(185818057)	C	MIRc	SINE/MIR	(35)	233	74	2513341
1128	23.3	18.4	2.5	chr3	12706372	12706736	(185588823)	C	LTR16	LTR/ERVL	(2)	436	1	2513892
42	18.7	4.2	2.4	chr3	12706819	12706919	(185588640)	+	(TCTT)n	Simple_repeat	1	103	(0)	2513893
5004	27.6	6.2	9.0	chr3	12709305	12710888	(185584671)	C	ERV3-16A3_I-int	LTR/ERVL	(849)	4377	2813	2513896
1121	27.3	9.5	0.0	chr3	14538241	14538584	(183756975)	+	MLT1K	LTR/ERVL-MaLR	124	503	(92)	2517153
247	33.6	5.8	2.6	chr3	15934722	15934837	(182360722)	+	L2c	LINE/L2	3243	3362	(25)	2519653
21658	8.0	0.3	1.4	chr3	17591266	17593200	(180702359)	+	HERVL-int	LTR/ERVL	1730	3638	(2016)	2522083
14983	8.4	1.4	0.1	chr3	20875538	20877490	(177418069)	C	HERVL-int	LTR/ERVL	(1136)	4518	2540	2526712
2825	5.3	3.6	0.0	chr3	20877473	20877846	(177417713)	+	HERVL-int	LTR/ERVL	5267	5654	(0)	2526710
592	30.3	1.6	2.1	chr3	24854472	24854660	(173440899)	+	MER5A	DNA/hAT-Charlie	1	188	(1)	2532520
38453	9.4	1.1	0.2	chr3	28439557	28445105	(169850454)	C	HERVL-int	LTR/ERVL	(0)	5654	5	2537759
1262	4.0	0.0	0.0	chr3	29439610	29439759	(168855800)	C	L1PA3	LINE/L1	(2)	6153	6004	2539174
671	22.4	1.2	2.4	chr3	33372845	33373009	(164922550)	+	MER5A1	DNA/hAT-Charlie	4	166	(0)	2545756
2836	31.4	5.0	6.5	chr3	38669189	38669912	(159625647)	C	ERVL-E-int	LTR/ERVL	(2811)	2856	2130	2553361
1831	15.1	1.1	0.7	chr3	41225934	41226213	(157069346)	C	MER1B	DNA/hAT-Charlie	(5)	334	54	2557222
1886	16.1	0.7	0.7	chr3	41984634	41984937	(156310622)	C	AluJo	SINE/Alu	(8)	304	1	2558312
2151	33.3	4.2	2.4	chr3	41984938	41985637	(156309922)	+	ERVL-E-int	LTR/ERVL	2284	2997	(2670)	2558313
1743	30.4	3.9	3.8	chr3	47186151	47186698	(151108861)	C	HERV16-int	LTR/ERVL	(2136)	2860	2315	2566608
44115	7.1	1.7	0.7	chr3	48005375	48007676	(150287883)	+	HERVL-int	LTR/ERVL	953	3289	(2365)	2568427
1604	8.0	8.1	6.4	chr3	50079811	50079933	(148215626)	C	L1PA8	LINE/L1	(0)	6172	6061	2572597
2282	9.6	0.3	0.3	chr3	50079934	50080234	(148215325)	C	AluSc	SINE/Alu	(7)	302	2	2572598
28281	6.1	0.6	0.1	chr3	55260823	55264254	(143031305)	+	HERVL-int	LTR/ERVL	1	3449	(2205)	2580175
305	23.6	4.3	2.2	chr3	56248704	56248794	(142046765)	C	MER131	DNA?	(100)	115	23	2581748
346	31.8	8.3	0.7	chr3	56863784	56863938	(141431621)	C	MIR3	SINE/MIR	(2)	206	39	2582886
405	31.4	8.7	7.5	chr3	56864045	56864689	(141430870)	+	L2c	LINE/L2	2690	3375	(0)	2582887
318	30.2	6.8	2.3	chr3	57073998	57074169	(141221390)	+	MIR	SINE/MIR	44	219	(43)	2583315
15	5.6	0.0	0.0	chr3	57074242	57074260	(141221299)	+	(AC)n	Simple_repeat	1	19	(0)	2583316
292	24.4	8.7	1.7	chr3	57074311	57074427	(141221132)	+	L2c	LINE/L2	3033	3158	(229)	2583317
349	33.0	16.8	3.0	chr3	57805099	57805992	(140489567)	+	L2c	LINE/L2	2114	3186	(189)	2584706
6698	7.6	1.0	1.1	chr3	57806040	57806431	(140489128)	C	L1PA8	LINE/L1	(1)	6171	5784	2584707
250	17.4	0.0	0.0	chr3	58334915	58334928	(139960631)	C	AluSq	SINE/Alu	(182)	131	118	2585828
63	1.8	0.0	0.0	chr3	58334929	58334986	(139960573)	+	(GT)n	Simple_repeat	1	58	(0)	2585829
250	17.4	0.0	0.0	chr3	58334987	58335018	(139960541)	C	AluSq	SINE/Alu	(196)	117	86	2585828
48	0.0	0.0	0.0	chr3	58335019	58335059	(139960500)	+	(GT)n	Simple_repeat	1	41	(0)	2585830
696	18.3	0.9	0.0	chr3	58335060	58335174	(139960385)	C	AluJo	SINE/Alu	(196)	116	1	2585831
368	27.8	12.5	2.3	chr3	61114403	61114531	(137181028)	+	MIRb	SINE/MIR	29	172	(96)	2590029
464	28.5	3.1	6.5	chr3	61466863	61467125	(136828434)	C	X8_LINE	LINE/CR1	(42)	254	1	2590629
277	35.6	10.7	4.1	chr3	63773157	63773399	(134522160)	C	L2c	LINE/L2	(1)	3386	3126	2594626
1774	11.8	0.4	4.1	chr3	64203734	64203979	(134091580)	+	AluSz6	SINE/Alu	48	284	(28)	2595310
23	12.3	2.7	7.9	chr3	64203980	64204040	(134091519)	+	(CAA)n	Simple_repeat	3	60	(0)	2595311
541	28.2	6.2	2.3	chr3	64204042	64204259	(134091300)	C	L2a	LINE/L2	(14)	3412	3186	2595312
355	33.3	2.2	2.9	chr3	64204271	64204406	(134091153)	C	MIRb	SINE/MIR	(31)	237	103	2595313
485	18.9	18.6	1.6	chr3	66008211	66008339	(132287220)	+	MER5A1	DNA/hAT-Charlie	2	157	(9)	2598460
297	32.2	6.4	9.0	chr3	66008473	66008762	(132286797)	C	L2c	LINE/L2	(77)	3310	3029	2598461
371	31.0	6.5	9.5	chr3	81466781	81467179	(116828380)	+	MLT1K	LTR/ERVL-MaLR	81	482	(113)	2622109
9592	20.0	2.9	0.4	chr3	86127828	86129618	(112165941)	+	ERVL-B4-int	LTR/ERVL	1768	3604	(2110)	2627875
16466	20.7	3.7	0.7	chr3	90046480	90048820	(108246739)	C	ERVL-B4-int	LTR/ERVL	(2405)	3309	902	2632701
2406	32.8	7.3	3.1	chr3	94494589	94495900	(103799659)	C	ERVL-E-int	LTR/ERVL	(2344)	3323	1953	2634367
25273	7.9	0.7	1.2	chr3	105602833	105604435	(92691124)	C	HERVL-int	LTR/ERVL	(2341)	3313	1725	2648460
9640	7.3	0.4	0.2	chr3	112694118	112695398	(85600161)	+	HERVL-int	LTR/ERVL	1396	2679	(2975)	2658182
27719	7.8	0.9	1.5	chr3	116574317	116577405	(81718154)	+	HERVL-int	LTR/ERVL	1932	5029	(625)	2663669
2675	31.2	4.5	6.1	chr3	119688771	119691141	(78604418)	+	PRIMAX-int	LTR/ERV1	1488	4630	(2983)	2668013
16	6.5	5.9	2.8	chr3	120093888	120093921	(78201638)	+	G-rich	Low_complexity	1	36	(0)	2668615
12	8.8	4.2	0.0	chr3	120094347	120094370	(78201189)	+	(TCCT)n	Simple_repeat	1	25	(0)	2668616
19	0.0	0.0	0.0	chr3	120094385	120094408	(78201151)	+	(GGC)n	Simple_repeat	1	24	(0)	2668617
702	25.0	0.0	1.4	chr3	123237056	123237193	(75058366)	C	MER58A	DNA/hAT-Charlie	(88)	136	1	2673394
890	29.6	9.7	1.7	chr3	123237380	123237809	(75057750)	C	ERVL-E-int	LTR/ERVL	(3263)	2451	1913	2673395
258	13.7	3.4	1.4	chr3	126212128	126212625	(72082934)	+	GA-rich	Low_complexity	1	515	(0)	2678259
240	26.3	3.9	3.3	chr3	126260035	126260987	(72034572)	+	(CCT)n	Simple_repeat	1	990	(0)	2678311
1725	16.0	2.6	0.0	chr3	128835476	128835769	(69459790)	C	HERVL-int	LTR/ERVL	(2813)	2841	2540	2682550
115	37.2	0.0	0.5	chr3	130236424	130236850	(68058709)	+	(CAC)n	Simple_repeat	1	427	(0)	2685214
193	19.0	0.0	2.3	chr3	133489448	133489490	(64806069)	C	MIRb	SINE/MIR	(0)	268	227	2689993
1438	30.9	8.4	2.5	chr3	133489524	133490242	(64805317)	+	HERVL-int	LTR/ERVL	2298	3062	(2592)	2689994
413	37.5	11.6	1.2	chr3	143345606	143345929	(54949630)	C	L2	LINE/L2	(2028)	1391	1030	2705550
402	35.7	4.8	1.4	chr3	143545956	143546155	(54749404)	C	MIR3	SINE/MIR	(15)	193	1	2705823
28074	7.0	1.4	0.1	chr3	143921064	143924620	(54370939)	C	HERVL-int	LTR/ERVL	(0)	5654	2051	2706346
190	33.3	8.5	8.5	chr3	151469848	151469965	(46825594)	C	MIR1_Amn	SINE/MIR	(109)	121	4	2716856
1079	33.4	5.6	5.4	chr3	151469995	151471006	(46824553)	+	MER57A-int	LTR/ERV1	3123	4143	(3470)	2716855
646	36.0	9.1	4.1	chr3	152954920	152955752	(45339807)	+	L2c	LINE/L2	2494	3384	(3)	2718913
366	28.7	2.4	1.6	chr3	152955770	152955893	(45339666)	+	L2a	LINE/L2	3299	3423	(3)	2718914
617	27.2	8.3	8.3	chr3	156151479	156151923	(42143636)	C	L1MC4	LINE/L1	(0)	8042	7598	2723649
847	19.9	4.3	0.6	chr3	160412953	160413108	(37882451)	C	AluJb	SINE/Alu	(24)	288	127	2729746
21587	10.6	2.2	2.4	chr3	162635813	162638640	(35656919)	C	HERVL-int	LTR/ERVL	(2377)	3277	362	2732846
7446	13.0	0.6	0.1	chr3	166350210	166351299	(31944260)	C	HERVL-int	LTR/ERVL	(2744)	2910	1815	2737405
737	11.3	6.8	0.8	chr3	166988290	166988414	(31307145)	C	HERVL-int	LTR/ERVL	(0)	5654	5522	2738158
5234	7.5	0.0	0.0	chr3	166988413	166989068	(31306491)	C	HERVL-int	LTR/ERVL	(2897)	2757	2102	2738158
8540	14.2	3.9	0.2	chr3	171534654	171535963	(26759596)	C	ERVL-B4-int	LTR/ERVL	(2274)	3440	2081	2744715
612	30.1	11.2	2.6	chr3	177104746	177105055	(21190504)	+	Kanga11a	DNA/TcMar-Tc2	171	510	(460)	2752583
2933	7.6	0.2	2.1	chr3	177653736	177654164	(20641395)	+	L1PREC2	LINE/L1	5303	5723	(437)	2753600
2866	16.9	8.6	2.8	chr3	177654247	177654917	(20640642)	C	L1MC3	LINE/L1	(0)	7785	7073	2753601
267	32.2	11.2	0.0	chr3	184574331	184574473	(13721086)	C	MIRb	SINE/MIR	(65)	203	43	2764934
185	23.5	8.1	8.1	chr3	184661356	184661388	(13634171)	+	L2b	LINE/L2	3040	3072	(303)	2765080
1868	9.4	5.7	11.0	chr3	184661389	184661610	(13633949)	C	AluSx1	SINE/Alu	(11)	301	97	2765081
584	24.3	6.4	0.5	chr3	188921639	188921828	(9373731)	+	MIRc	SINE/MIR	2	203	(65)	2772724
1837	11.7	0.0	0.0	chr3	192869022	192869268	(5426291)	+	AluSz	SINE/Alu	49	295	(17)	2778588
36	3.8	15.7	4.3	chr3	192869269	192869389	(5426170)	+	GA-rich	Low_complexity	1	140	(0)	2778589
807	20.6	5.2	2.0	chr3	194326487	194328036	(3967523)	+	(CA)n	Simple_repeat	1	1630	(0)	2780940
255	37.7	9.9	5.2	chr3	194577915	194578082	(3717477)	C	L3	LINE/CR1	(82)	4017	3828	2781423
30	8.2	0.0	0.0	chr4	1025267	1025305	(189189250)	+	(CA)n	Simple_repeat	1	39	(0)	2789791
308	35.1	9.7	0.6	chr4	1518354	1518522	(188696033)	+	L1MB8	LINE/L1	5811	5996	(188)	2790275
270	23.2	0.9	3.5	chr4	2243849	2244080	(187970475)	+	HERVIP10FH-int	LTR/ERV1	788	1013	(4089)	2791314
16	11.6	3.6	0.0	chr4	2244081	2244108	(187970447)	+	GA-rich	Low_complexity	1	29	(0)	2791315
2103	14.2	0.0	1.6	chr4	2753158	2753473	(187461082)	+	AluJr	SINE/Alu	2	312	(0)	2792179
38802	6.0	0.3	1.0	chr4	3456524	3458303	(186756252)	+	HERVL-int	LTR/ERVL	1853	3617	(2037)	2793185
758	18.4	0.0	0.8	chr4	4682055	4682179	(185532376)	C	AluJo	SINE/Alu	(188)	124	1	2795231
335	28.8	1.2	0.0	chr4	4682250	4682329	(185532226)	+	MIRb	SINE/MIR	126	206	(62)	2795232
267	26.1	11.8	2.2	chr4	4682333	4682347	(185532208)	+	MIR3	SINE/MIR	23	38	(170)	2795233
2296	16.3	0.5	0.3	chr4	4682348	4682734	(185531821)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	1	2795234
2618	11.2	1.5	0.5	chr4	6422468	6422853	(183791702)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	2798349
386	33.1	8.2	7.5	chr4	6423114	6423191	(183791364)	C	L2a	LINE/L2	(1)	3425	3357	2798350
2346	10.6	0.6	0.6	chr4	6423192	6423503	(183791052)	C	AluSz	SINE/Alu	(0)	312	1	2798351
136	19.9	1.5	5.9	chr4	7190236	7190635	(183023920)	+	(TCCT)n	Simple_repeat	1	406	(0)	2799777
1300	17.7	6.4	3.9	chr4	7190638	7190897	(183023658)	C	AluJr	SINE/Alu	(45)	267	1	2799778
37	15.7	3.4	6.6	chr4	7574543	7574659	(182639896)	+	GA-rich	Low_complexity	1	121	(0)	2800338
433	26.2	2.3	0.0	chr4	7750827	7750952	(182463603)	+	LTR33B	LTR/ERVL	371	499	(4)	2800631
2710	29.9	9.1	5.1	chr4	7750967	7751417	(182463138)	C	ERVL-E-int	LTR/ERVL	(2923)	2744	2275	2800632
2286	11.5	12.6	0.3	chr4	7751418	7751792	(182462763)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2800633
5221	10.0	2.0	0.7	chr4	8654022	8654532	(181560023)	C	L1PA10	LINE/L1	(6)	6162	5651	2802092
287	30.9	4.2	6.8	chr4	12965132	12965277	(177249278)	C	L2b	LINE/L2	(17)	3370	3229	2808576
1085	19.9	3.1	0.6	chr4	12965359	12965677	(177248878)	C	MER74C	LTR/ERVL	(153)	405	2	2808577
464	34.1	7.5	0.6	chr4	19947181	19947354	(170267201)	+	L2b	LINE/L2	3189	3375	(0)	2820255
6440	19.5	1.3	0.5	chr4	20686483	20687717	(169526838)	C	ERVL-B4-int	LTR/ERVL	(2512)	3202	1958	2821283
2377	26.6	6.2	5.5	chr4	25166701	25167736	(165046819)	+	MER89-int	LTR/ERV1	2603	3582	(4688)	2828396
929	28.1	8.4	7.0	chr4	26103808	26104309	(164110246)	+	MLT1J	LTR/ERVL-MaLR	3	512	(0)	2830382
43677	8.0	0.7	0.2	chr4	31501796	31507425	(158707130)	+	HERVL-int	LTR/ERVL	1	5654	(0)	2838205
30405	18.2	3.4	2.7	chr4	35203782	35209480	(155005075)	+	ERVL-int	LTR/ERVL	22	5757	(0)	2843118
2107	10.9	2.8	17.0	chr4	41294560	41294977	(148919578)	+	LTR18A	LTR/ERVL	1	357	(0)	2853803
190	28.4	1.2	5.8	chr4	41540781	41540866	(148673689)	C	L2c	LINE/L2	(21)	3366	3285	2854243
34677	8.2	1.1	0.2	chr4	43445832	43450201	(146764354)	C	HERVL-int	LTR/ERVL	(0)	5654	1250	2856998
35496	8.2	0.8	0.6	chr4	46485985	46490651	(143723904)	+	HERVL-int	LTR/ERVL	224	4902	(752)	2860902
1851	33.8	15.9	3.4	chr4	51908495	51909909	(138304646)	C	MamRTE1	LINE/RTE-BovB	(2159)	1653	29	2865475
608	30.4	2.6	8.2	chr4	53325943	53326127	(136888428)	+	L1M5	LINE/L1	3771	3947	(2199)	2867540
237	30.2	12.8	0.0	chr4	53586323	53586438	(136628117)	C	UCON64	Unknown	(81)	570	438	2867909
329	29.5	3.7	2.3	chr4	53586823	53586954	(136627601)	C	MIRb	SINE/MIR	(0)	268	135	2867910
37807	10.3	1.9	2.2	chr4	65811509	65813642	(124400913)	+	HERVL-int	LTR/ERVL	2268	4485	(1169)	2884856
33978	15.8	1.7	2.0	chr4	69528367	69532008	(120682547)	+	HERVL-int	LTR/ERVL	6	3669	(1985)	2889496
456	28.9	14.4	4.8	chr4	76299707	76299975	(113914580)	C	L2b	LINE/L2	(0)	3426	3128	2899038
254	17.0	1.9	0.0	chr4	76461460	76461512	(113753043)	C	LTR33A	LTR/ERVL	(23)	497	444	2899286
1524	26.6	8.4	1.4	chr4	76461515	76462067	(113752488)	C	ERVL-E-int	LTR/ERVL	(2950)	2717	2123	2899287
14000	12.9	0.2	0.9	chr4	77630872	77632868	(112581687)	C	HERVL18-int	LTR/ERVL	(0)	6047	4066	2900944
2072	14.3	0.0	1.6	chr4	78826195	78826502	(111388053)	C	AluSx1	SINE/Alu	(9)	303	1	2902817
6992	18.8	3.0	3.3	chr4	79104528	79107450	(111107105)	C	L1PA8	LINE/L1	(0)	6792	5766	2903194
43317	7.4	0.6	0.1	chr4	80174938	80180341	(110034214)	C	HERVL-int	LTR/ERVL	(2)	5652	223	2904496
601	29.7	7.3	0.5	chr4	80360210	80360412	(109854143)	C	L1PA13	LINE/L1	(5531)	1254	1037	2904727
25740	21.9	3.2	2.0	chr4	80793684	80799041	(109415514)	C	ERVL-E-int	LTR/ERVL	(241)	5426	5	2905253
24	22.1	2.9	0.0	chr4	84580403	84580470	(105634085)	+	A-rich	Low_complexity	1	70	(0)	2911310
1347	14.8	22.1	0.0	chr4	84580665	84580935	(105633620)	+	Tigger3a	DNA/TcMar-Tigger	1	348	(0)	2911311
406	29.9	10.1	2.0	chr4	95526014	95526214	(94688341)	C	Tigger14a	DNA/TcMar-Tigger	(9)	315	97	2926530
22776	16.9	2.9	2.1	chr4	95715889	95718012	(94496543)	C	ERVL-B4-int	LTR/ERVL	(2193)	3521	1410	2926756
14145	7.5	0.4	0.2	chr4	99192246	99194146	(91020409)	C	HERVL-int	LTR/ERVL	(1934)	3720	1817	2931366
1156	36.2	5.6	3.9	chr4	100338413	100339318	(89875237)	+	ERVL-E-int	LTR/ERVL	1471	2393	(3274)	2932919
310	31.3	1.1	5.1	chr4	100339329	100339505	(89875050)	+	ERVL-E-int	LTR/ERVL	2589	2758	(2909)	2932919
1535	35.4	6.4	1.3	chr4	100339530	100340350	(89874205)	+	ERVL-E-int	LTR/ERVL	2812	3676	(1991)	2932919
518	33.7	6.4	5.9	chr4	101757207	101758091	(88456464)	+	HERVL-int	LTR/ERVL	2268	3013	(2641)	2934785
391	30.5	8.3	3.3	chr4	107992587	107992769	(82221786)	+	MIR	SINE/MIR	51	243	(19)	2942788
2176	12.2	0.3	0.7	chr4	107992833	107993135	(82221420)	+	AluSx	SINE/Alu	1	302	(10)	2942789
1313	20.8	0.4	3.2	chr4	114980931	114981180	(75233375)	+	AluJo	SINE/Alu	1	243	(69)	2952696
61	3.2	0.0	0.0	chr4	114981206	114981269	(75233286)	+	(GAAG)n	Simple_repeat	1	64	(0)	2952697
242	36.3	4.0	2.0	chr4	114981337	114981485	(75233070)	C	MER5A	DNA/hAT-Charlie	(1)	188	37	2952698
26433	20.5	3.5	2.7	chr4	115893711	115898769	(74315786)	+	ERVL-B4-int	LTR/ERVL	477	5572	(142)	2953794
23759	7.6	0.4	0.3	chr4	124473094	124476102	(65738453)	+	HERVL-int	LTR/ERVL	1788	4797	(857)	2965318
33634	15.7	2.1	0.9	chr4	126059828	126063877	(64150678)	C	HERVL-int	LTR/ERVL	(0)	5654	1574	2967407
38922	11.2	1.7	1.4	chr4	126186701	126191188	(64023367)	C	HERVL-int	LTR/ERVL	(0)	5654	1125	2967533
3046	34.8	4.8	4.7	chr4	130062633	130064883	(60149672)	+	PRIMA4-int	LTR/ERV1	3467	5704	(2566)	2972942
5857	6.8	3.5	0.4	chr4	132090409	132091164	(58123391)	C	LTR17	LTR/ERV1	(0)	780	1	2975474
19019	11.8	0.8	0.4	chr4	132091165	132093778	(58120777)	C	HERVL-int	LTR/ERVL	(3026)	2628	1	2975471
553	23.3	6.3	2.2	chr4	136313193	136313328	(53901227)	+	ERVL-B4-int	LTR/ERVL	2545	2686	(3028)	2980303
26265	7.0	1.0	0.1	chr4	139444411	139447658	(50766897)	+	HERVL-int	LTR/ERVL	1767	5043	(611)	2984645
621	15.7	13.7	1.5	chr4	139458138	139458271	(50756284)	+	AluJr	SINE/Alu	130	282	(30)	2984663
5192	10.8	6.3	2.3	chr4	139458282	139459107	(50755448)	C	L1PA15	LINE/L1	(1)	6164	5304	2984664
13	10.0	0.0	0.0	chr4	140515247	140515268	(49699287)	+	(TGA)n	Simple_repeat	1	22	(0)	2986349
272	31.9	1.1	1.1	chr4	140515272	140515363	(49699192)	C	ERVL-E-int	LTR/ERVL	(3062)	2605	2514	2986350
302	26.3	4.3	3.6	chr4	141122533	141122670	(49091885)	+	L1M5	LINE/L1	5614	5752	(372)	2987286
36	7.2	0.0	0.0	chr4	141133452	141133495	(49081060)	+	(GT)n	Simple_repeat	1	44	(0)	2987301
4054	20.3	6.5	0.0	chr4	141424403	141425150	(48789405)	C	ERVL-E-int	LTR/ERVL	(2569)	3098	2299	2987651
11665	5.9	2.7	3.0	chr4	141688841	141690423	(48524132)	C	LTR12C	LTR/ERV1	(0)	1579	2	2988020
684	35.4	9.1	2.3	chr4	146951921	146952319	(43262236)	+	ERVL-E-int	LTR/ERVL	2365	2793	(2874)	2994993
30371	7.2	1.6	0.0	chr4	149042372	149046249	(41168306)	+	HERVL-int	LTR/ERVL	1716	5654	(0)	2997928
17865	16.9	2.1	2.4	chr4	155741208	155744359	(34470196)	C	ERVL-B4-int	LTR/ERVL	(2572)	3142	1	3007862
389	4.3	0.0	0.0	chr4	156932308	156932354	(33282201)	C	L1P1	LINE/L1	(1584)	4562	4516	3009438
4717	2.4	0.4	0.0	chr4	156932355	156932907	(33281648)	+	L1PA4	LINE/L1	5601	6155	(0)	3009439
25570	9.8	1.3	0.3	chr4	157404724	157408193	(32806362)	C	HERVL-int	LTR/ERVL	(0)	5654	2148	3010052
21276	11.8	1.0	0.7	chr4	164688412	164692541	(25522014)	+	HERVL-int	LTR/ERVL	48	4258	(1396)	3019715
25688	6.1	0.3	0.2	chr4	169318146	169323847	(20890708)	+	L1PA5	LINE/L1	449	6154	(0)	3026157
26822	6.7	0.4	1.1	chr4	169323856	169327208	(20887347)	+	HERVL-int	LTR/ERVL	2324	5654	(0)	3026156
526	28.0	13.8	6.5	chr4	174252357	174252616	(15961939)	C	MLT1L	LTR/ERVL-MaLR	(8)	602	321	3032708
24	6.5	0.0	0.0	chr4	174252654	174252685	(15961870)	+	(CA)n	Simple_repeat	1	32	(0)	3032709
1606	15.4	12.5	0.0	chr4	174252726	174252985	(15961570)	+	AluSz6	SINE/Alu	1	297	(15)	3032710
1811	14.6	7.5	1.3	chr4	177408692	177409049	(12805506)	+	MER39B	LTR/ERV1	33	415	(238)	3036881
1412	36.1	2.0	0.6	chr4	177762537	177763172	(12451383)	C	ERVL-B4-int	LTR/ERVL	(2234)	3480	2836	3037390
822	33.0	8.8	6.1	chr4	177763210	177763868	(12450687)	C	ERVL-B4-int	LTR/ERVL	(3087)	2670	2068	3037390
1218	33.6	6.8	3.6	chr4	178591572	178592470	(11622085)	+	ERVL-B4-int	LTR/ERVL	1740	2669	(3045)	3038407
348	32.3	14.3	1.4	chr4	181566381	181566726	(8647829)	C	MamGypLTR2b	LTR/Gypsy	(28)	894	497	3042246
21	13.4	0.0	0.0	chr4	182767571	182767603	(7446952)	+	(TG)n	Simple_repeat	1	33	(0)	3043875
13	16.8	0.0	0.0	chr4	185907748	185907775	(4306780)	+	(CTCC)n	Simple_repeat	1	28	(0)	3048900
490	17.8	1.2	0.4	chr5	426194	427129	(181111130)	+	(ATGG)n	Simple_repeat	1	947	(0)	3055416
3040	27.3	8.9	0.8	chr5	966075	966639	(180571620)	C	L1MC4a	LINE/L1	(7)	7875	7273	3055836
222	5.5	5.1	1.1	chr5	983588	983937	(180554322)	+	(GT)n	Simple_repeat	1	368	(0)	3055865
1490	31.1	3.2	2.4	chr5	1448685	1449244	(180089015)	+	ERVL-E-int	LTR/ERVL	2510	3075	(2592)	3056256
332	22.9	6.7	3.0	chr5	1929062	1930478	(179607781)	+	(GTGTCGT)n	Simple_repeat	1	1512	(0)	3056791
12	23.8	3.9	1.9	chr5	2717581	2717631	(178820628)	+	(TCCCCTT)n	Simple_repeat	1	53	(0)	3057580
12	16.3	0.0	7.5	chr5	2717610	2717649	(178820610)	+	(TCCCC)n	Simple_repeat	1	40	(0)	3057581
40667	8.4	0.8	0.4	chr5	3948100	3953235	(177585024)	C	HERVL-int	LTR/ERVL	(0)	5654	500	3058855
724	10.8	5.3	2.2	chr5	6447182	6448619	(175089640)	+	(CA)n	Simple_repeat	1	1515	(0)	3061878
627	27.3	15.1	5.2	chr5	6676668	6677034	(174861225)	+	MLT1J1	LTR/ERVL-MaLR	34	443	(1)	3062167
2057	33.9	2.5	4.4	chr5	6680307	6681281	(174856978)	+	ERVL-E-int	LTR/ERVL	1749	2704	(2963)	3062171
1483	20.0	6.4	5.0	chr5	6681291	6681674	(174856585)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3062172
138	17.8	3.8	1.2	chr5	6681681	6681994	(174856265)	+	(GT)n	Simple_repeat	1	326	(0)	3062173
329	20.2	3.9	2.9	chr5	8208251	8209182	(173329077)	+	(TG)n	Simple_repeat	1	968	(0)	3064083
1819	11.0	5.6	2.1	chr5	10248992	10249282	(171288977)	+	AluSz6	SINE/Alu	2	303	(9)	3066551
189	20.0	3.9	0.0	chr5	10249315	10249364	(171288895)	+	MIR	SINE/MIR	67	118	(144)	3066552
510	25.3	3.1	3.6	chr5	10249377	10249590	(171288669)	C	MIR	SINE/MIR	(32)	236	18	3066553
18730	7.2	0.2	0.0	chr5	10717681	10720094	(170818165)	+	HERVL-int	LTR/ERVL	1462	3879	(1775)	3067363
1054	16.5	0.0	0.6	chr5	14480812	14480981	(167057278)	+	FAM	SINE/Alu	3	171	(14)	3072219
738	20.9	0.0	0.4	chr5	14481033	14481176	(167057083)	+	FLAM_C	SINE/Alu	7	220	(82)	3072220
1471	19.9	9.8	2.5	chr5	15011146	15011334	(166526925)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	179	3073037
2177	13.8	0.0	0.3	chr5	15011335	15011638	(166526621)	C	AluSz	SINE/Alu	(9)	303	1	3073038
41539	9.3	1.1	0.3	chr5	27897991	27903597	(153634662)	+	HERVL-int	LTR/ERVL	1	5654	(0)	3090498
1783	14.9	0.0	7.1	chr5	31996733	31996901	(149541358)	+	AluJb	SINE/Alu	135	299	(13)	3095983
307	32.1	6.4	0.6	chr5	31997178	31997340	(149540919)	+	L3	LINE/CR1	3586	3758	(341)	3095985
2236	12.0	0.3	0.3	chr5	32157695	32157978	(149380281)	+	AluSq2	SINE/Alu	1	284	(29)	3096279
47	0.0	0.0	0.0	chr5	32157979	32158021	(149380238)	+	(AAAT)n	Simple_repeat	1	43	(0)	3096280
44	0.0	0.0	0.0	chr5	32158024	32158061	(149380198)	+	(AC)n	Simple_repeat	1	38	(0)	3096281
43	0.0	0.0	0.0	chr5	32158092	32158130	(149380129)	+	(AAAT)n	Simple_repeat	1	39	(0)	3096282
49	0.0	0.0	0.0	chr5	32158133	32158174	(149380085)	+	(AC)n	Simple_repeat	1	42	(0)	3096283
45208	6.4	1.7	0.3	chr5	32287596	32293169	(149245090)	+	HERVL-int	LTR/ERVL	1	5654	(0)	3096553
2247	10.8	0.0	0.3	chr5	32367152	32367437	(149170822)	+	AluSq2	SINE/Alu	1	285	(28)	3096702
51	0.0	1.9	1.8	chr5	32367438	32367491	(149170768)	+	(AAAT)n	Simple_repeat	1	55	(0)	3096703
1460	17.4	2.9	5.2	chr5	32367492	32367693	(149170566)	C	AluJo	SINE/Alu	(83)	229	21	3096701
30426	8.3	0.8	0.3	chr5	34379030	34383052	(147155207)	+	HERVL-int	LTR/ERVL	2	4044	(1610)	3099730
3482	23.9	11.9	1.1	chr5	35973329	35974909	(145563350)	+	ERVL-B4-int	LTR/ERVL	967	2724	(2990)	3102137
4163	19.4	1.3	0.4	chr5	35974911	35975666	(145562593)	+	ERVL-B4-int	LTR/ERVL	3841	4603	(1111)	3102137
40062	8.9	3.5	2.5	chr5	35994375	35997431	(145540828)	+	PRIMA4-int	LTR/ERV1	566	3728	(4542)	3102157
2415	9.9	1.0	0.0	chr5	35997432	35997724	(145540535)	C	AluSx1	SINE/Alu	(16)	296	1	3102161
45631	6.3	0.6	1.2	chr5	37266879	37269074	(144269185)	C	HERVL-int	LTR/ERVL	(1633)	4021	1829	3104123
33293	7.2	0.8	0.9	chr5	37795417	37798236	(143740023)	+	HERVL-int	LTR/ERVL	1386	4200	(1454)	3105045
323	22.5	3.6	10.1	chr5	38077444	38077651	(143460608)	C	L1MEi	LINE/L1	(141)	2071	1878	3105528
991	17.7	0.0	0.0	chr5	38077659	38077822	(143460437)	C	Tigger3c	DNA/TcMar-Tigger	(2)	600	437	3105529
192	21.3	2.1	6.0	chr5	38077978	38078027	(143460232)	+	MamRTE1	LINE/RTE-BovB	1991	2038	(1774)	3105530
19887	12.2	1.4	1.4	chr5	39972278	39975995	(141562264)	C	HERVL-int	LTR/ERVL	(0)	5654	1734	3108321
44203	7.4	0.5	0.1	chr5	41659425	41665041	(139873218)	C	HERVL-int	LTR/ERVL	(0)	5654	20	3110684
56	0.0	0.0	0.0	chr5	42424172	42424219	(139114040)	+	(GT)n	Simple_repeat	1	48	(0)	3111602
1512	19.1	0.7	0.7	chr5	43014258	43014534	(138523725)	C	AluJb	SINE/Alu	(31)	281	5	3112409
36	0.0	0.0	2.6	chr5	43014689	43014726	(138523533)	+	(AAAT)n	Simple_repeat	1	38	(0)	3112410
22	18.0	1.9	1.9	chr5	43014774	43014826	(138523433)	+	(TCCT)n	Simple_repeat	1	54	(0)	3112411
4216	14.6	2.3	0.3	chr5	43984358	43985032	(137553227)	C	ERVL-B4-int	LTR/ERVL	(2779)	2935	2247	3113763
285	33.3	3.9	4.8	chr5	54280506	54280609	(127257650)	C	L2b	LINE/L2	(14)	3361	3259	3121479
14014	9.2	1.8	0.6	chr5	55315921	55318777	(126219482)	+	L1PA14	LINE/L1	3274	6158	(3)	3123062
242	34.9	11.5	0.0	chr5	57738893	57739061	(123799198)	C	L2c	LINE/L2	(4)	3383	3193	3127178
431	30.6	3.2	3.2	chr5	57739067	57739191	(123799068)	+	L2b	LINE/L2	3251	3375	(0)	3127179
301	24.8	9.2	1.5	chr5	59713109	59713239	(121825020)	+	L1ME3Cz	LINE/L1	88	229	(768)	3129864
2092	15.1	4.8	0.3	chr5	59713242	59713580	(121824679)	+	LTR18A	LTR/ERVL	3	357	(0)	3129865
33795	6.8	0.5	0.3	chr5	61908556	61913030	(119625229)	C	HERVL-int	LTR/ERVL	(0)	5654	1171	3132956
44849	7.0	1.0	0.4	chr5	62102783	62108274	(119429985)	+	HERVL-int	LTR/ERVL	128	5654	(0)	3133200
2591	17.4	3.0	0.0	chr5	64563302	64563754	(116974505)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	3136578
28178	7.9	2.7	2.4	chr5	65487355	65491213	(116047046)	C	HERVL-int	LTR/ERVL	(0)	5654	1784	3137898
699	16.0	0.0	4.0	chr5	68044256	68044379	(113493880)	+	L1PA10	LINE/L1	6049	6167	(1)	3141624
2504	14.4	0.2	2.0	chr5	68044445	68044840	(113493419)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	2	3141625
1971	26.9	8.2	5.3	chr5	71677774	71678515	(109859744)	+	ERVL-E-int	LTR/ERVL	2202	2967	(2700)	3147897
45314	6.8	1.0	0.1	chr5	71896877	71902482	(109635777)	+	HERVL-int	LTR/ERVL	1	5654	(0)	3148222
1795	24.1	10.1	1.4	chr5	72516534	72517046	(109021213)	+	MLT1F1	LTR/ERVL-MaLR	7	569	(0)	3149093
1880	26.2	5.1	1.3	chr5	72936499	72937043	(108601216)	C	MLT1G1	LTR/ERVL-MaLR	(9)	570	4	3149721
1082	24.9	16.2	2.4	chr5	73458032	73458257	(108080002)	C	MLT1G3	LTR/ERVL-MaLR	(207)	388	113	3150499
1924	16.9	2.6	7.3	chr5	73458258	73458665	(108079594)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	3	3150500
16028	13.1	1.2	0.6	chr5	73481793	73484133	(108054126)	C	ERVL-B4-int	LTR/ERVL	(1323)	4391	2035	3150554
19290	18.0	7.9	6.7	chr5	74788730	74792199	(106746060)	+	HERVL-int	LTR/ERVL	2157	5654	(0)	3152507
1181	16.0	0.0	1.1	chr5	77877806	77877993	(103660266)	C	AluJb	SINE/Alu	(0)	312	127	3157313
54	22.9	1.4	2.0	chr5	79134001	79134145	(102404114)	+	GA-rich	Low_complexity	1	147	(0)	3159133
2550	6.3	0.3	0.0	chr5	79611683	79611982	(101926277)	C	AluSg	SINE/Alu	(9)	301	1	3160093
54	0.0	0.0	0.0	chr5	81736144	81736189	(99802070)	+	(AC)n	Simple_repeat	1	46	(0)	3163544
42310	8.2	0.8	1.5	chr5	85245147	85250836	(96287423)	C	HERVL-int	LTR/ERVL	(0)	5654	1	3168301
23579	7.2	0.6	0.4	chr5	87049830	87051798	(94486461)	C	HERVL-int	LTR/ERVL	(1212)	4442	2465	3170562
6227	14.9	4.0	2.2	chr5	87051799	87053529	(94484730)	+	L1M2	LINE/L1	4018	5767	(530)	3170564
49	0.0	0.0	0.0	chr5	88142197	88142238	(93396021)	+	(CA)n	Simple_repeat	1	42	(0)	3171930
47	0.0	0.0	0.0	chr5	88785280	88785319	(92752940)	+	(AC)n	Simple_repeat	1	40	(0)	3172783
18	4.8	0.0	0.0	chr5	91643671	91643692	(89894567)	+	(TG)n	Simple_repeat	1	22	(0)	3176544
20	22.9	3.9	0.0	chr5	91643692	91643743	(89894516)	+	GA-rich	Low_complexity	1	54	(0)	3176545
22	27.9	6.2	2.2	chr5	91643739	91643866	(89894393)	+	A-rich	Low_complexity	1	136	(0)	3176546
29872	9.7	0.9	0.6	chr5	92060903	92064735	(89473524)	+	HERVL-int	LTR/ERVL	1798	5653	(1)	3177058
43730	7.4	0.7	0.2	chr5	92215634	92221263	(89316996)	+	HERVL-int	LTR/ERVL	1	5654	(0)	3177232
12299	22.6	3.9	3.6	chr5	102077205	102078766	(79459493)	+	L1PA15	LINE/L1	1	1599	(5186)	3189689
6221	7.8	1.7	2.3	chr5	106593381	106594992	(74943267)	+	L1PA10	LINE/L1	4548	6152	(16)	3195330
1341	18.4	10.3	0.0	chr5	106595018	106595261	(74942998)	+	AluJo	SINE/Alu	7	278	(34)	3195331
6421	19.3	8.4	3.5	chr5	108375396	108376503	(73161756)	+	L1M4	LINE/L1	4081	5269	(1737)	3197536
2617	26.8	11.1	6.4	chr5	109686333	109686986	(71851273)	C	ERVL-E-int	LTR/ERVL	(2910)	2757	2009	3199327
7029	32.3	5.7	6.1	chr5	110700829	110704480	(70833779)	+	ERV24B_Prim-int	LTR/ERV1	2310	5925	(1688)	3200555
640	15.9	9.8	0.0	chr5	111091902	111092058	(70446201)	C	L1MC5	LINE/L1	(191)	9113	8940	3200971
1750	14.4	6.0	4.7	chr5	115545130	115545471	(65992788)	C	THE1B	LTR/ERVL-MaLR	(0)	364	18	3206942
2094	12.5	1.0	1.3	chr5	116424468	116424778	(65113481)	+	AluSc8	SINE/Alu	1	310	(1)	3208123
344	31.4	7.3	3.2	chr5	116424886	116425108	(65113151)	+	L2b	LINE/L2	3160	3382	(5)	3208124
57	0.0	0.0	0.0	chr5	121961699	121961747	(59576512)	+	(AC)n	Simple_repeat	1	49	(0)	3215350
26971	8.8	2.4	0.4	chr5	122971455	122975074	(58563185)	C	HERVL-int	LTR/ERVL	(0)	5654	1959	3216760
40	18.3	4.5	1.7	chr5	123089023	123089029	(58449230)	+	(TCCCTC)n	Simple_repeat	1	43	(64)	3216921
14	14.8	2.4	4.8	chr5	123089030	123089070	(58449189)	+	(TCCCC)n	Simple_repeat	1	42	(0)	3216922
40	18.3	4.5	1.7	chr5	123089071	123089077	(58449182)	+	(TCCCTC)n	Simple_repeat	44	107	(0)	3216921
48	1.8	0.0	0.0	chr5	123089078	123089126	(58449133)	+	(TC)n	Simple_repeat	1	49	(0)	3216923
76	0.0	0.0	0.0	chr5	123089127	123089191	(58449068)	+	(CA)n	Simple_repeat	1	65	(0)	3216924
25004	6.8	0.5	0.3	chr5	124358253	124364401	(57173858)	+	L1PA5	LINE/L1	4	6149	(5)	3218572
2477	9.7	0.6	6.0	chr5	124364417	124364800	(57173459)	+	L1PA8A	LINE/L1	5769	6131	(0)	3218571
5716	14.0	1.1	2.1	chr5	124992563	124993525	(56544734)	C	L1MA8	LINE/L1	(0)	6291	5338	3219476
9809	32.5	4.5	3.1	chr5	125792830	125797389	(55740870)	C	ERVL47-int	LTR/ERVL	(615)	4631	5	3220454
568	32.4	13.6	5.8	chr5	126120040	126120428	(55417831)	+	LTR16E2	LTR/ERVL	1	443	(125)	3220800
43473	7.7	0.8	1.3	chr5	127674484	127680145	(53858114)	+	HERVL-int	LTR/ERVL	1	5635	(19)	3223158
18	32.4	1.9	3.7	chr5	128538382	128538488	(52999771)	+	G-rich	Low_complexity	1	109	(0)	3224262
4226	24.6	14.2	3.3	chr5	132780440	132782228	(48756031)	C	HAL1b	LINE/L1	(9)	2412	397	3229905
1136	18.6	4.7	0.0	chr5	133774303	133774506	(47763753)	+	MER20	DNA/hAT-Charlie	2	215	(4)	3231376
1831	31.9	7.5	2.5	chr5	133774649	133775392	(47762867)	+	ERVL-E-int	LTR/ERVL	2509	3292	(2375)	3231377
1711	17.2	0.0	0.3	chr5	134095200	134095525	(47442734)	+	AluJr	SINE/Alu	1	312	(0)	3231936
1023	19.4	2.0	0.5	chr5	134095712	134095903	(47442356)	C	MER3	DNA/hAT-Charlie	(0)	209	15	3231937
27	24.4	1.3	1.3	chr5	134850919	134850994	(46687265)	+	(CATA)n	Simple_repeat	1	77	(0)	3233510
45	0.0	0.0	0.0	chr5	134850995	134851035	(46687224)	+	(TATT)n	Simple_repeat	1	41	(0)	3233511
129	31.1	1.8	0.6	chr5	135481825	135482282	(46055977)	+	(GT)n	Simple_repeat	1	466	(0)	3234355
5131	14.1	5.0	1.1	chr5	137911526	137912365	(43625894)	C	L1MA9	LINE/L1	(4)	6308	5438	3237737
762	25.1	3.5	1.5	chr5	138173575	138173769	(43364490)	C	AluJb	SINE/Alu	(19)	293	95	3238277
1160	17.9	3.8	1.0	chr5	138173770	138173976	(43364283)	C	AluJb	SINE/Alu	(99)	213	1	3238278
484	19.3	6.1	2.8	chr5	139451075	139451558	(42086701)	+	(TG)n	Simple_repeat	1	508	(0)	3240793
306	15.3	6.3	3.6	chr5	139453670	139454526	(42083733)	+	(TG)n	Simple_repeat	1	911	(0)	3240797
840	25.8	1.4	0.0	chr5	139475742	139475954	(42062305)	C	LTR33	LTR/ERVL	(299)	216	1	3240837
400	26.9	9.1	2.4	chr5	146025754	146025917	(35512342)	+	MIRb	SINE/MIR	1	176	(92)	3251730
44	21.0	4.9	0.8	chr5	149299895	149300016	(32238243)	+	(CA)n	Simple_repeat	1	128	(0)	3257412
3428	11.0	1.2	1.4	chr5	149445195	149445708	(32092551)	C	LTR10D	LTR/ERV1	(0)	513	1	3257750
839	27.7	8.2	8.8	chr5	149445709	149446074	(32092185)	C	MLT1H	LTR/ERVL-MaLR	(85)	464	83	3257748
16	12.8	5.7	0.0	chr5	149732036	149732045	(31806214)	+	(GC)n	Simple_repeat	1	10	(0)	3258412
38	0.0	0.0	0.0	chr5	149732046	149732078	(31806181)	+	(GT)n	Simple_repeat	1	33	(0)	3258413
16	12.8	5.7	0.0	chr5	149732079	149732102	(31806157)	+	(GC)n	Simple_repeat	1	26	(0)	3258414
56	0.0	0.0	0.0	chr5	149778064	149778111	(31760148)	+	(CA)n	Simple_repeat	1	48	(0)	3258525
17	0.0	0.0	0.0	chr5	149778146	149778164	(31760095)	+	(AC)n	Simple_repeat	1	19	(0)	3258526
541	26.1	2.4	1.2	chr5	149922004	149922166	(31616093)	+	L1M5	LINE/L1	5643	5807	(317)	3258842
150	24.1	0.8	0.0	chr5	150263332	150263682	(31274577)	+	(AC)n	Simple_repeat	1	354	(0)	3259566
2327	6.7	3.4	0.0	chr5	154682189	154682471	(26855788)	C	AluSx	SINE/Alu	(19)	293	1	3267768
19	27.9	4.0	1.3	chr5	159209582	159209656	(22328603)	+	(GC)n	Simple_repeat	1	78	(0)	3275707
469	27.0	9.8	2.8	chr5	159516877	159517055	(22021204)	+	MIR	SINE/MIR	59	251	(11)	3276252
2303	9.2	0.0	2.7	chr5	160008560	160008851	(21529408)	+	AluJb	SINE/Alu	1	284	(28)	3277188
59	0.0	0.0	0.0	chr5	160008852	160008904	(21529355)	+	(AAAT)n	Simple_repeat	1	53	(0)	3277189
380	29.4	17.8	3.3	chr5	160316531	160316889	(21221370)	C	L1ME4b	LINE/L1	(28)	864	443	3277916
190	31.7	1.6	1.6	chr5	160316977	160317037	(21221222)	C	MamSINE1	SINE/tRNA-RTE	(47)	243	183	3277917
2295	9.6	0.0	1.3	chr5	160417508	160417810	(21120449)	+	AluSx	SINE/Alu	3	301	(11)	3278129
279	32.9	4.2	6.3	chr5	160417813	160418033	(21120226)	+	L2a	LINE/L2	2844	3059	(360)	3278125
39725	7.6	1.4	1.1	chr5	160990660	160995498	(20542761)	+	HERVL-int	LTR/ERVL	1	4859	(795)	3279041
12745	17.1	3.2	0.5	chr5	161057962	161060118	(20478141)	C	ERVL-int	LTR/ERVL	(2331)	3426	1210	3279153
3018	13.2	7.9	1.8	chr5	163409204	163409759	(18128500)	+	LTR49	LTR/ERV1	1	593	(2)	3282506
486	28.9	12.7	9.8	chr5	168787396	168787783	(12750476)	+	L2a	LINE/L2	3026	3426	(0)	3290745
376	30.4	8.2	0.8	chr5	168787808	168787979	(12750280)	+	L2a	LINE/L2	3191	3426	(0)	3290746
65	37.0	2.2	4.5	chr5	168875040	168875349	(12662910)	+	A-rich	Low_complexity	1	304	(0)	3290875
2294	11.9	0.0	0.6	chr5	168875350	168875660	(12662599)	+	AluSq	SINE/Alu	1	309	(4)	3290876
36	29.5	2.3	3.9	chr5	170484539	170484713	(11053546)	+	(TTCTCT)n	Simple_repeat	1	179	(0)	3293688
2027	12.8	0.7	0.0	chr5	172029501	172029782	(9508477)	+	AluSz6	SINE/Alu	29	312	(0)	3296523
1601	33.3	2.9	4.1	chr5	172029837	172030178	(9508081)	C	HERV16-int	LTR/ERVL	(2170)	2826	2483	3296524
1052	21.7	2.5	0.0	chr5	172030179	172030408	(9507851)	+	Tigger4a	DNA/TcMar-Tigger	1	236	(0)	3296525
1601	33.3	2.9	4.1	chr5	172030409	172030789	(9507470)	C	HERV16-int	LTR/ERVL	(2514)	2482	2112	3296524
60	28.1	4.7	1.7	chr5	172707629	172707902	(8830357)	+	(GAGTGT)n	Simple_repeat	1	287	(0)	3298018
28	2.9	2.8	0.0	chr5	172707908	172707943	(8830316)	+	(AG)n	Simple_repeat	1	37	(0)	3298019
31	20.4	3.4	2.2	chr5	173328239	173328327	(8209932)	+	(CTC)n	Simple_repeat	1	92	(0)	3299412
341	31.5	10.3	2.9	chr5	174719035	174719204	(6819055)	+	MIRb	SINE/MIR	14	197	(71)	3302095
180	31.9	0.0	1.4	chr5	174719224	174719296	(6818963)	C	MIRb	SINE/MIR	(70)	198	127	3302096
2395	6.7	0.0	2.3	chr5	175492973	175493271	(6044988)	+	AluY	SINE/Alu	2	293	(18)	3303512
467	22.2	16.3	11.3	chr5	175493272	175493335	(6044924)	C	MER58C	DNA/hAT-Charlie	(128)	87	1	3303511
425	30.5	7.5	5.5	chr5	175493336	175493483	(6044776)	+	L1M6	LINE/L1	678	825	(5671)	3303510
1954	13.5	1.4	0.7	chr5	175905020	175905307	(5632952)	+	AluSz	SINE/Alu	2	291	(21)	3304378
3693	22.5	11.7	6.7	chr5	175905308	175906360	(5631899)	+	ERV3-16A3_I-int	LTR/ERVL	2349	3443	(1783)	3304375
16	16.3	0.0	2.8	chr5	176507053	176507088	(5031171)	+	(TAT)n	Simple_repeat	1	36	(0)	3305422
510	23.2	1.1	0.2	chr5	176591513	176592659	(4945600)	+	(GGT)n	Simple_repeat	1	1160	(0)	3305621
2546	31.1	5.1	4.0	chr5	177555408	177555930	(3982329)	+	ERVL-E-int	LTR/ERVL	2060	2602	(3065)	3307614
2157	10.6	0.7	1.0	chr5	177555931	177556233	(3982026)	C	AluSx	SINE/Alu	(10)	302	1	3307615
509	21.8	0.2	1.2	chr5	178357711	178358788	(3179471)	+	(TGTGTG)n	Simple_repeat	1	1080	(0)	3309045
1765	15.3	0.4	0.8	chr5	180560991	180561251	(977008)	C	AluJb	SINE/Alu	(52)	260	1	3312909
6848	18.8	8.0	1.7	chr5	180561252	180561347	(976912)	C	L1MDa	LINE/L1	(5276)	1357	1242	3312907
44	2.2	2.2	0.0	chr5	180561348	180561393	(976866)	+	(TG)n	Simple_repeat	1	47	(0)	3312910
6848	21.5	7.9	1.9	chr5	180561394	180562313	(975946)	C	L1MDa	LINE/L1	(5392)	1241	24	3312907
185	29.9	0.7	0.2	chr5	180594793	180595346	(942913)	+	(GT)n	Simple_repeat	1	558	(0)	3312963
282	27.3	0.0	2.5	chr5	180595351	180595429	(942830)	C	MLT1D	LTR/ERVL-MaLR	(311)	194	118	3312962
2468	8.0	0.3	0.0	chr5	181188094	181188405	(349854)	+	AluSp	SINE/Alu	1	313	(0)	3313823
670	1.4	0.0	0.0	chr5	181188416	181188488	(349771)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3313824
6653	9.2	1.4	1.0	chr5	181266862	181267826	(270433)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	3313956
844	28.4	9.3	4.9	chr5	181267827	181268142	(270117)	+	LTR8B	LTR/ERV1	52	387	(433)	3313955
48	36.0	3.6	4.0	chr6	367347	367737	(170438242)	+	(ACAT)n	Simple_repeat	1	389	(0)	3314733
297	21.2	2.9	0.1	chr6	440277	440975	(170365004)	+	(CATCC)n	Simple_repeat	1	719	(0)	3314816
2422	9.3	0.3	0.0	chr6	1551778	1552087	(169253892)	+	AluY	SINE/Alu	1	311	(0)	3316315
1685	28.2	8.0	2.8	chr6	1552088	1552585	(169253394)	+	ERVL-E-int	LTR/ERVL	2273	2860	(2854)	3316313
390	28.3	17.0	2.8	chr6	1552621	1552697	(169253282)	+	ERVL-E-int	LTR/ERVL	2752	2830	(2396)	3316313
43	4.5	0.0	0.0	chr6	1552698	1552743	(169253236)	+	(TG)n	Simple_repeat	1	46	(0)	3316316
390	28.3	17.0	2.8	chr6	1552744	1552805	(169253174)	+	ERVL-E-int	LTR/ERVL	2831	2923	(2303)	3316313
422	13.2	3.0	0.0	chr6	1737488	1738217	(169067762)	+	(CA)n	Simple_repeat	1	752	(0)	3316519
13	14.8	0.0	3.1	chr6	3227898	3227929	(167578050)	+	(GTCTGG)n	Simple_repeat	1	32	(0)	3318605
242	28.1	11.6	0.7	chr6	4288014	4288167	(166517812)	C	L2b	LINE/L2	(167)	3220	3047	3320238
1091	19.4	1.4	1.8	chr6	6707799	6708018	(164097961)	C	MER20	DNA/hAT-Charlie	(0)	219	1	3323790
366	24.4	3.2	0.0	chr6	6708163	6708252	(164097727)	C	MER89-int	LTR/ERV1	(4163)	2638	2546	3323791
2110	10.7	0.0	6.9	chr6	6708297	6708615	(164097364)	+	AluSx	SINE/Alu	1	297	(15)	3323792
52	22.1	3.5	1.4	chr6	6834596	6834747	(163971232)	+	(TC)n	Simple_repeat	1	155	(0)	3324004
13	34.0	1.2	3.7	chr6	6834691	6834771	(163971208)	+	(CCTC)n	Simple_repeat	1	82	(0)	3324005
383	31.6	4.8	1.2	chr6	6834773	6834932	(163971047)	C	MLT1O	LTR/ERVL-MaLR	(345)	197	32	3324006
2386	9.6	0.0	0.0	chr6	7376108	7376389	(163429590)	+	AluSc8	SINE/Alu	1	282	(29)	3325035
53	0.0	0.0	1.9	chr6	7376390	7376441	(163429538)	+	(AAAT)n	Simple_repeat	1	52	(0)	3325036
1617	21.4	9.3	6.0	chr6	7376442	7376644	(163429335)	+	MSTD	LTR/ERVL-MaLR	194	395	(1)	3325034
32683	5.8	1.6	0.3	chr6	8403957	8407927	(162398052)	C	HERVL-int	LTR/ERVL	(0)	5654	1515	3326684
1148	23.3	0.9	0.5	chr6	12322255	12322470	(158483509)	+	MER20	DNA/hAT-Charlie	3	219	(0)	3332501
180	33.3	10.8	1.0	chr6	12322603	12322702	(158483277)	+	L2a	LINE/L2	3316	3426	(0)	3332502
33368	14.7	2.6	1.2	chr6	14434560	14438711	(156367268)	+	ERVL-B4-int	LTR/ERVL	1134	5381	(333)	3336000
28	0.0	0.0	0.0	chr6	14799139	14799165	(156006814)	+	(GGAA)n	Simple_repeat	1	27	(0)	3336567
61	15.6	0.0	0.9	chr6	14799260	14799370	(156006609)	+	GA-rich	Low_complexity	1	111	(0)	3336568
576	29.6	1.4	1.9	chr6	14799376	14799585	(156006394)	C	MIR	SINE/MIR	(14)	248	40	3336569
16	20.2	0.0	4.1	chr6	16129126	16129174	(154676805)	+	G-rich	Low_complexity	1	49	(0)	3339045
935	31.8	5.2	2.6	chr6	16434938	16435586	(154370393)	C	L2a	LINE/L2	(711)	2708	2042	3339520
15	9.8	0.0	0.0	chr6	18585170	18585191	(152220788)	+	(AC)n	Simple_repeat	1	22	(0)	3343313
7187	23.1	5.5	6.7	chr6	21358931	21361143	(149444836)	C	HERVL32-int	LTR/ERVL	(1711)	3535	1274	3347523
47	0.0	0.0	0.0	chr6	21814662	21814701	(148991278)	+	(TG)n	Simple_repeat	1	40	(0)	3348360
1937	10.9	4.3	0.0	chr6	21814702	21814968	(148991011)	C	AluSq2	SINE/Alu	(33)	280	2	3348361
323	29.2	0.1	0.9	chr6	24926826	24927718	(145878261)	+	(CAC)n	Simple_repeat	1	894	(0)	3352777
1855	18.0	0.3	0.3	chr6	25181805	25182098	(145623881)	+	AluJr	SINE/Alu	1	294	(18)	3353205
1233	31.0	5.7	6.5	chr6	25838435	25839182	(144966797)	C	ERV3-16A3_I-int	LTR/ERVL	(2391)	2835	2135	3354185
1056	19.4	7.1	6.8	chr6	26277343	26277440	(144528539)	+	MER39	LTR/ERV1	610	707	(0)	3354940
1807	17.1	8.7	0.6	chr6	26277563	26277920	(144528059)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3354942
239	23.8	3.4	6.7	chr6	26342201	26342290	(144463689)	C	MIRc	SINE/MIR	(17)	251	165	3355063
2423	11.1	1.3	0.0	chr6	27156689	27156995	(143648984)	+	AluSz	SINE/Alu	1	311	(1)	3356391
48	31.3	0.7	1.3	chr6	27156996	27157148	(143648831)	+	A-rich	Low_complexity	1	154	(0)	3356392
201	34.5	1.2	3.5	chr6	27157178	27157264	(143648715)	C	L2c	LINE/L2	(222)	3165	3081	3356393
8661	24.1	6.0	3.3	chr6	27206996	27208022	(143597957)	+	ERVL-E-int	LTR/ERVL	1465	2562	(3105)	3356472
1917	11.4	7.3	3.1	chr6	27208023	27208348	(143597631)	C	MER61A	LTR/ERV1	(0)	341	1	3356473
20	7.9	0.0	0.0	chr6	27213509	27213535	(143592444)	+	(A)n	Simple_repeat	1	27	(0)	3356486
2183	8.9	0.0	0.0	chr6	27213536	27213815	(143592164)	+	AluSq2	SINE/Alu	1	280	(33)	3356487
671	0.0	0.0	0.0	chr6	27213844	27213916	(143592063)	C	tRNA-Arg-CGY_	tRNA	(3)	73	1	3356488
2913	17.5	6.7	2.4	chr6	27517161	27517573	(143288406)	C	L1MC3	LINE/L1	(49)	7736	7325	3357031
2394	12.3	0.0	0.0	chr6	27517574	27517881	(143288098)	C	AluSx1	SINE/Alu	(4)	308	1	3357032
3992	20.3	2.9	4.7	chr6	27579534	27580357	(143225622)	+	LTR53-int	LTR/ERVL	858	1672	(1657)	3357153
2257	10.2	0.0	0.0	chr6	27580358	27580651	(143225328)	+	AluSq2	SINE/Alu	1	294	(19)	3357154
5268	23.8	5.6	3.5	chr6	27766970	27768592	(143037387)	+	MER70-int	LTR/ERVL	787	3092	(2438)	3357558
13	29.9	2.2	5.4	chr6	29628296	29628385	(141177594)	+	GA-rich	Low_complexity	1	92	(0)	3360367
391	16.9	3.5	2.4	chr6	29965034	29965118	(140840861)	+	LTR18B	LTR/ERVL	268	353	(261)	3360892
286	20.8	0.4	1.5	chr6	30541777	30541841	(140264138)	+	MamRep38	DNA/hAT	240	295	(0)	3361777
550	32.0	18.3	2.1	chr6	30541842	30543199	(140262780)	+	L2c	LINE/L2	1599	3246	(129)	3361778
17	22.9	5.9	0.0	chr6	30908441	30908491	(139897488)	+	GA-rich	Low_complexity	1	54	(0)	3362483
361	28.8	13.2	2.9	chr6	31554614	31555078	(139250901)	+	L1ME4b	LINE/L1	195	658	(266)	3363501
2519	8.0	0.0	0.6	chr6	31555227	31555538	(139250441)	C	AluSx	SINE/Alu	(2)	310	1	3363502
27	6.1	0.0	0.0	chr6	31620910	31620944	(139185035)	+	(GGTGGC)n	Simple_repeat	1	35	(0)	3363641
47	0.0	0.0	0.0	chr6	31652321	31652360	(139153619)	+	(AC)n	Simple_repeat	1	40	(0)	3363672
16	0.0	0.0	0.0	chr6	31701373	31701390	(139104589)	+	(AC)n	Simple_repeat	1	18	(0)	3363744
1897	16.2	0.3	1.4	chr6	31755158	31755319	(139050660)	C	AluJo	SINE/Alu	(18)	294	136	3363838
2314	9.6	0.3	1.0	chr6	31755320	31755337	(139050642)	C	AluSp	SINE/Alu	(12)	301	286	3363839
44	0.0	0.0	0.0	chr6	31755338	31755377	(139050602)	+	(ATTT)n	Simple_repeat	1	40	(0)	3363840
2314	9.6	0.3	1.0	chr6	31755378	31755661	(139050318)	C	AluSp	SINE/Alu	(28)	285	1	3363839
19	20.2	2.1	2.1	chr6	32583868	32583914	(138222065)	+	(CA)n	Simple_repeat	1	48	(0)	3365100
31	9.3	0.0	0.0	chr6	32583974	32584017	(138221962)	+	(CT)n	Simple_repeat	1	44	(0)	3365101
48	0.0	0.0	0.0	chr6	32584018	32584058	(138221921)	+	(CA)n	Simple_repeat	1	41	(0)	3365102
2224	12.8	0.3	0.0	chr6	34286077	34286380	(136519599)	C	AluSz6	SINE/Alu	(7)	305	1	3368028
12	8.0	0.0	9.4	chr6	35320012	35320043	(135485936)	+	G-rich	Low_complexity	1	32	(0)	3370119
651	28.2	14.8	0.1	chr6	35320047	35320268	(135485711)	+	MIR	SINE/MIR	1	261	(1)	3370120
31	20.5	1.5	0.0	chr6	36287671	36287737	(134518242)	+	GA-rich	Low_complexity	1	68	(0)	3372166
47	0.0	0.0	0.0	chr6	36287756	36287795	(134518184)	+	(AC)n	Simple_repeat	1	40	(0)	3372167
226	30.3	20.4	3.5	chr6	36287860	36288061	(134517918)	+	Tigger19b	DNA/TcMar-Tigger	306	550	(0)	3372168
1947	13.0	7.8	2.8	chr6	36448527	36448704	(134357275)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	216	3372541
46	2.3	0.0	0.0	chr6	36680308	36680351	(134125628)	+	(GT)n	Simple_repeat	1	44	(0)	3373075
223	25.8	3.0	5.8	chr6	36728472	36728574	(134077405)	C	L2c	LINE/L2	(232)	3155	3056	3373170
13	13.2	0.0	0.0	chr6	40587342	40587366	(130218613)	+	(TGTG)n	Simple_repeat	1	25	(0)	3379731
16	14.2	0.0	0.0	chr6	40587387	40587417	(130218562)	+	(CACACA)n	Simple_repeat	1	31	(0)	3379732
43	2.5	0.0	0.0	chr6	40587494	40587534	(130218445)	+	(CA)n	Simple_repeat	1	41	(0)	3379733
1808	18.6	13.6	1.9	chr6	41532699	41533108	(129272871)	+	MLT1C	LTR/ERVL-MaLR	1	465	(2)	3381350
54	3.7	0.0	0.0	chr6	41656187	41656241	(129149738)	+	(CA)n	Simple_repeat	1	55	(0)	3381563
35	27.6	3.7	2.1	chr6	41656256	41656391	(129149588)	+	(CA)n	Simple_repeat	1	141	(0)	3381563
1695	16.1	11.2	0.3	chr6	42913105	42913234	(127892745)	+	L1MB3	LINE/L1	5977	6136	(47)	3384315
274	22.2	0.0	0.0	chr6	42913238	42913291	(127892688)	+	AluJb	SINE/Alu	135	188	(114)	3384317
252	26.9	0.0	0.0	chr6	42913305	42913356	(127892623)	+	FAM	SINE/Alu	99	150	(35)	3384318
2159	9.3	0.0	1.9	chr6	42913357	42913666	(127892313)	C	AluSg	SINE/Alu	(5)	305	2	3384319
2113	12.7	0.7	0.0	chr6	42930882	42931189	(127874790)	C	AluSz	SINE/Alu	(2)	310	1	3384366
306	31.3	3.9	8.0	chr6	42939880	42940091	(127865888)	C	MIRb	SINE/MIR	(59)	209	7	3384382
2058	9.3	0.0	2.2	chr6	43114794	43115071	(127690908)	+	AluSq2	SINE/Alu	37	308	(5)	3384725
322	30.2	3.4	0.3	chr6	43293872	43294963	(127511016)	+	(CAC)n	Simple_repeat	1	1129	(0)	3385083
1233	26.0	5.9	3.6	chr6	43753330	43753855	(127052124)	C	HAL1	LINE/L1	(1187)	1320	782	3385959
49	20.0	10.2	4.0	chr6	43753863	43754155	(127051824)	+	(GTATGTG)n	Simple_repeat	1	323	(0)	3385960
22	14.9	0.0	0.0	chr6	43769692	43769738	(127036241)	+	(GT)n	Simple_repeat	1	47	(0)	3385987
2008	20.0	1.5	5.0	chr6	43996495	43996969	(126809010)	C	MLT1C	LTR/ERVL-MaLR	(9)	458	1	3386386
19	33.0	1.3	1.3	chr6	43996981	43997057	(126808922)	+	(TG)n	Simple_repeat	1	78	(0)	3386387
310	27.1	11.5	0.4	chr6	44041918	44042051	(126763928)	+	L2c	LINE/L2	2991	3141	(246)	3386467
222	32.9	0.0	0.0	chr6	44042141	44042210	(126763769)	C	L2c	LINE/L2	(47)	3340	3271	3386468
313	33.5	0.4	1.7	chr6	44044439	44045643	(126760336)	+	(CA)n	Simple_repeat	1	1210	(0)	3386471
41	17.1	3.5	0.0	chr6	46734307	46734391	(124071588)	+	GA-rich	Low_complexity	1	88	(0)	3390625
16	0.0	4.2	4.0	chr6	46734392	46734415	(124071564)	+	(GT)n	Simple_repeat	1	25	(0)	3390626
94	0.0	1.1	1.1	chr6	46734416	46734503	(124071476)	+	(GA)n	Simple_repeat	1	89	(0)	3390627
2324	11.0	1.0	1.0	chr6	46734541	46734849	(124071130)	+	AluSc8	SINE/Alu	1	309	(2)	3390628
24243	10.3	2.1	1.0	chr6	47178328	47181671	(123624308)	C	HERVL-int	LTR/ERVL	(2272)	3382	1	3391358
553	32.3	13.8	0.7	chr6	47405283	47405578	(123400401)	C	L2c	LINE/L2	(2)	3385	3045	3391699
8639	5.9	1.0	1.8	chr6	49439021	49440123	(121365856)	C	HERVL-int	LTR/ERVL	(2076)	3578	2485	3394374
26005	8.1	1.1	0.5	chr6	55624104	55627500	(115178479)	+	HERVL-int	LTR/ERVL	2239	5654	(0)	3403152
889	32.3	7.8	5.0	chr6	56027468	56027965	(114778014)	C	LTR86C	LTR/ERVL	(36)	585	73	3403658
310	31.2	9.2	5.9	chr6	56027994	56028143	(114777836)	C	ERVL-E-int	LTR/ERVL	(3094)	2663	2508	3403659
1975	16.4	8.6	3.7	chr6	56028144	56028549	(114777430)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3403660
26516	11.0	0.7	0.7	chr6	62119039	62122755	(108683224)	+	HERVL-int	LTR/ERVL	1	3718	(1936)	3408870
33856	16.4	1.4	0.9	chr6	68134510	68140135	(102665844)	C	HERVL-int	LTR/ERVL	(0)	5654	1	3416334
31787	8.1	1.1	1.0	chr6	72190494	72192767	(98613212)	C	HERVL-int	LTR/ERVL	(1942)	3712	1453	3421553
33320	15.3	3.8	1.9	chr6	75515857	75518327	(95287652)	C	ERVL-B4-int	LTR/ERVL	(0)	4338	1748	3426318
53	1.9	1.9	0.0	chr6	78635638	78635690	(92170289)	+	(AC)n	Simple_repeat	1	54	(0)	3430239
2125	9.6	9.4	4.4	chr6	78858334	78858747	(91947232)	+	LTR14B	LTR/ERVK	1	608	(0)	3430479
900	10.5	6.5	4.0	chr6	78858750	78858787	(91947192)	C	AluSx	SINE/Alu	(159)	153	121	3430476
8797	1.0	0.0	0.0	chr6	78858788	78859755	(91946224)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3430480
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
407	26.9	4.9	0.6	chr6	79089412	79089568	(91716411)	C	L1MC4	LINE/L1	(190)	7852	7689	3430788
308	18.8	3.9	1.2	chr6	79089569	79090289	(91715690)	+	(CCTT)n	Simple_repeat	1	749	(0)	3430789
4919	10.7	4.0	1.2	chr6	79678653	79679580	(91126399)	C	L1PA16	LINE/L1	(2)	6164	5175	3431606
26146	7.0	0.8	0.7	chr6	80386457	80390104	(90415875)	+	HERVL-int	LTR/ERVL	1334	5022	(632)	3432574
26113	9.2	2.1	2.2	chr6	81884816	81887710	(88918269)	C	HERVL-int	LTR/ERVL	(717)	4937	2006	3434377
2094	14.9	0.0	0.3	chr6	82062457	82062758	(88743221)	+	AluSz	SINE/Alu	1	301	(11)	3434585
41434	7.2	1.6	0.3	chr6	83010975	83016556	(87789423)	C	HERVL-int	LTR/ERVL	(0)	5654	1	3435931
1901	15.8	1.4	0.3	chr6	83478946	83479237	(87326742)	C	AluJr	SINE/Alu	(10)	302	8	3436588
774	18.7	5.7	1.2	chr6	83479239	83479406	(87326573)	C	MLT1E3	LTR/ERVL-MaLR	(448)	176	1	3436589
2038	11.5	12.3	0.0	chr6	83867684	83867996	(86937983)	+	LTR18A	LTR/ERVL	1	357	(0)	3437088
877	33.2	4.0	2.0	chr6	84235212	84235604	(86570375)	+	ERV3-16A3_I-int	LTR/ERVL	1848	2248	(3419)	3437591
987	32.7	2.4	0.3	chr6	84235607	84235934	(86570045)	+	ERV3-16A3_I-int	LTR/ERVL	2464	2798	(2869)	3437591
17	24.5	2.0	0.0	chr6	85642957	85642998	(85162981)	+	(CG)n	Simple_repeat	1	43	(0)	3439341
26	3.1	3.0	0.0	chr6	85642999	85643031	(85162948)	+	(CCCTT)n	Simple_repeat	1	34	(0)	3439342
15	23.8	2.8	5.5	chr6	85643038	85643108	(85162871)	+	(TCC)n	Simple_repeat	1	73	(0)	3439343
23	27.2	2.9	2.9	chr6	85643224	85643325	(85162654)	+	(CTCG)n	Simple_repeat	1	105	(0)	3439344
438	29.5	17.0	2.3	chr6	87065714	87065973	(83740006)	+	L3	LINE/CR1	3051	3356	(743)	3440997
1220	17.1	0.9	0.9	chr6	87946499	87946717	(82859262)	C	MER20	DNA/hAT-Charlie	(0)	219	1	3442485
19	16.7	0.0	2.4	chr6	88166571	88166612	(82639367)	+	(CCT)n	Simple_repeat	1	42	(0)	3442791
750	27.9	7.7	2.5	chr6	89119550	89119832	(81686147)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	169	3444214
1888	20.2	8.3	3.9	chr6	89435972	89436486	(81369493)	C	MER119	DNA/hAT-Charlie	(0)	583	44	3444767
929	17.6	2.0	0.0	chr6	89436516	89436734	(81369245)	+	L1MB3	LINE/L1	5843	6016	(167)	3444768
1935	28.1	7.8	4.4	chr6	89882232	89882812	(80923167)	C	ERVL-E-int	LTR/ERVL	(2544)	3123	2512	3445577
25	21.4	1.6	1.6	chr6	89882922	89882982	(80922997)	+	(AT)n	Simple_repeat	1	62	(0)	3445579
198	32.8	7.6	8.8	chr6	90197896	90197973	(80608006)	C	MamRTE1	LINE/RTE-BovB	(57)	3755	3677	3446023
1847	16.0	2.0	14.4	chr6	90197974	90198382	(80607597)	+	LTR18A	LTR/ERVL	1	357	(0)	3446024
37	2.9	0.0	0.0	chr6	90219780	90219815	(80586164)	+	(AC)n	Simple_repeat	1	36	(0)	3446053
14	18.2	0.0	0.0	chr6	90586843	90586873	(80219106)	+	GA-rich	Low_complexity	1	31	(0)	3446604
2268	14.2	3.3	5.5	chr6	91300823	91301261	(79504718)	C	MER39	LTR/ERV1	(38)	669	241	3447515
5426	11.3	4.0	0.5	chr6	96427157	96427509	(74378470)	C	L1PB2	LINE/L1	(1)	6150	5790	3453735
40	0.0	0.0	0.0	chr6	96427510	96427543	(74378436)	+	(GT)n	Simple_repeat	1	34	(0)	3453736
5486	13.1	3.8	0.8	chr6	96427544	96428942	(74377037)	C	L1PB2	LINE/L1	(362)	5789	4358	3453735
20245	15.3	4.4	1.4	chr6	96701643	96705067	(74100912)	+	ERVL-B4-int	LTR/ERVL	1	3530	(2184)	3454017
29796	7.6	1.3	0.1	chr6	104079673	104083498	(66722481)	+	HERVL-int	LTR/ERVL	1	3870	(1784)	3463535
194	32.7	9.8	0.0	chr6	104852082	104852182	(65953797)	C	MIR3	SINE/MIR	(10)	198	87	3464523
35	0.0	0.0	0.0	chr6	104852200	104852229	(65953750)	+	(TG)n	Simple_repeat	1	30	(0)	3464524
13	15.4	6.7	2.1	chr6	104852463	104852507	(65953472)	+	GA-rich	Low_complexity	1	48	(0)	3464525
43555	7.3	2.2	0.3	chr6	105217494	105222766	(65583213)	C	HERVL-int	LTR/ERVL	(274)	5380	1	3465155
23417	7.9	1.8	1.0	chr6	105237759	105241723	(65564256)	+	L1PB1	LINE/L1	2876	6865	(2)	3465170
16873	13.9	3.2	0.7	chr6	109711421	109714446	(61091533)	C	L1PA13	LINE/L1	(3655)	3111	1	3472561
586	18.3	17.1	4.6	chr6	110053017	110053234	(60752745)	+	MIR	SINE/MIR	12	262	(0)	3473099
1241	20.6	5.3	14.0	chr6	110847539	110847691	(59958288)	C	MLT2C1	LTR/ERVL	(180)	217	82	3474453
36	0.0	2.7	0.0	chr6	110847692	110847728	(59958251)	+	(TTTGTTT)n	Simple_repeat	1	38	(0)	3474456
2221	9.8	0.0	1.4	chr6	110847729	110848013	(59957966)	C	AluSg	SINE/Alu	(29)	281	1	3474457
1241	20.6	5.3	14.0	chr6	110848014	110848100	(59957879)	C	MLT2C1	LTR/ERVL	(316)	81	2	3474453
16739	16.5	2.9	3.6	chr6	111161463	111163146	(59642833)	C	LTR25-int	LTR/ERV1	(1)	7187	5545	3475139
451	33.1	5.4	6.7	chr6	111567971	111568401	(59237578)	+	Plat_L3	LINE/CR1	2911	3335	(251)	3475843
68	0.0	0.0	0.0	chr6	111568433	111568490	(59237489)	+	(GT)n	Simple_repeat	1	58	(0)	3475844
488	11.9	1.5	0.0	chr6	111568636	111568702	(59237277)	+	AluSz	SINE/Alu	1	68	(244)	3475845
13	15.7	9.3	0.0	chr6	111568709	111568751	(59237228)	+	(ATCCATG)n	Simple_repeat	1	47	(0)	3475846
202	28.4	4.9	0.8	chr6	112027930	112028020	(58777959)	+	L2a	LINE/L2	3275	3421	(5)	3476542
1002	28.8	4.9	3.0	chr6	116072371	116072530	(54733449)	+	MLT1I	LTR/ERVL-MaLR	1	165	(246)	3482090
41	0.0	0.0	0.0	chr6	116072531	116072565	(54733414)	+	(AC)n	Simple_repeat	1	35	(0)	3482091
1002	28.8	4.9	3.0	chr6	116072566	116072805	(54733174)	+	MLT1I	LTR/ERVL-MaLR	166	409	(2)	3482090
32	26.9	0.0	3.7	chr6	116616035	116616141	(54189838)	+	(TCCC)n	Simple_repeat	1	107	(0)	3482821
17	8.2	3.9	0.0	chr6	116616124	116616149	(54189830)	+	(CA)n	Simple_repeat	1	27	(0)	3482822
39	35.2	1.9	0.0	chr6	121191019	121191197	(49614782)	+	(AT)n	Simple_repeat	1	182	(0)	3488652
43162	8.0	0.8	0.6	chr6	121192125	121197766	(49608213)	+	HERVL-int	LTR/ERVL	2	5654	(0)	3488654
2806	9.0	0.2	3.2	chr6	125038825	125039236	(45766743)	C	L1PA10	LINE/L1	(0)	6168	5769	3493759
452	26.3	5.6	3.2	chr6	125114014	125114170	(45691809)	+	MIRb	SINE/MIR	74	234	(34)	3493869
246	25.2	1.0	8.0	chr6	125170094	125170205	(45635774)	+	LTR40a	LTR/ERVL	1	104	(415)	3493962
273	27.3	7.1	3.4	chr6	125170209	125170356	(45635623)	C	LTR40b	LTR/ERVL	(124)	338	185	3493963
986	25.2	6.1	2.9	chr6	125170414	125170764	(45635215)	+	LTR40a	LTR/ERVL	152	514	(5)	3493962
30848	15.8	3.3	4.1	chr6	125268464	125272207	(45533772)	+	HERVL18-int	LTR/ERVL	443	4229	(1818)	3494096
470	35.1	14.8	3.0	chr6	125987369	125988463	(44817516)	C	L2c	LINE/L2	(413)	3006	1761	3495122
1730	30.9	6.2	2.9	chr6	131116526	131116730	(39689249)	+	L1MEd	LINE/L1	316	520	(6566)	3501858
834	15.4	9.3	0.0	chr6	131116731	131116905	(39689074)	+	MER53	DNA/hAT	1	193	(0)	3501859
1730	30.9	6.2	2.9	chr6	131116906	131117449	(39688530)	+	L1MEd	LINE/L1	521	1086	(6000)	3501858
4216	4.9	1.2	0.0	chr6	133558414	133558920	(37247059)	C	MER9a2	LTR/ERVK	(0)	513	1	3505384
29689	7.2	0.8	0.3	chr6	133558921	133561510	(37244469)	C	HERVL-int	LTR/ERVL	(3040)	2614	2	3505383
26170	7.4	0.5	0.8	chr6	133655961	133659489	(37146490)	+	HERVL-int	LTR/ERVL	1758	5274	(380)	3505523
370	32.1	6.3	1.5	chr6	133916610	133916745	(36889234)	C	MIRb	SINE/MIR	(121)	147	5	3505876
460	22.2	0.8	6.4	chr6	133916774	133916898	(36889081)	C	Tigger17c	DNA/TcMar-Tigger	(978)	210	93	3505877
440	21.6	7.0	4.4	chr6	133916898	133917023	(36888956)	+	MLT2F	LTR/ERVL	432	563	(0)	3505878
54	0.0	0.0	0.0	chr6	134052251	134052296	(36753683)	+	(AC)n	Simple_repeat	1	46	(0)	3506090
23068	10.4	2.0	1.5	chr6	137837314	137842804	(32963175)	C	L1PB1	LINE/L1	(0)	6867	1341	3512068
1616	12.3	14.7	2.4	chr6	138946872	138947035	(31858944)	+	THE1D	LTR/ERVL-MaLR	2	211	(170)	3513825
48	0.0	0.0	0.0	chr6	138947036	138947076	(31858903)	+	(CT)n	Simple_repeat	1	41	(0)	3513826
1616	12.3	14.7	2.4	chr6	138947077	138947243	(31858736)	+	THE1D	LTR/ERVL-MaLR	212	381	(0)	3513825
42034	7.7	1.8	1.6	chr6	140692782	140696014	(30109965)	C	HERVL-int	LTR/ERVL	(0)	3279	1	3516363
1919	23.6	9.7	1.2	chr6	142192833	142193639	(28612340)	C	L1MC4	LINE/L1	(131)	7911	6974	3518175
3606	12.4	4.4	0.3	chr6	142193649	142194212	(28611767)	+	ERVL-B4-int	LTR/ERVL	2436	3023	(2691)	3518177
34384	7.1	1.0	1.7	chr6	143869286	143872553	(26933426)	C	HERVL-int	LTR/ERVL	(964)	4690	1464	3520537
43800	6.8	1.6	1.3	chr6	145570255	145573736	(25232243)	C	HERVL-int	LTR/ERVL	(0)	5654	2125	3522941
1968	3.6	0.0	0.0	chr6	145663248	145663496	(25142483)	+	L1PA2	LINE/L1	126	374	(5781)	3523047
226	20.0	0.0	0.0	chr6	148985569	148985613	(21820366)	C	L2-3_Crp	LINE/L2	(1299)	797	753	3527753
1995	18.4	3.2	2.8	chr6	149462521	149463067	(21342912)	+	MLT2A2	LTR/ERVL	1	553	(1)	3528479
217	32.7	6.6	4.9	chr6	149463264	149463427	(21342552)	C	L2a	LINE/L2	(461)	2958	2792	3528477
2063	8.9	0.0	0.0	chr6	149463429	149463699	(21342280)	+	AluSg	SINE/Alu	1	271	(39)	3528480
1948	15.9	0.7	0.0	chr6	149637972	149638266	(21167713)	C	AluJr	SINE/Alu	(8)	304	8	3528839
2178	12.7	0.7	0.0	chr6	149975208	149975498	(20830481)	+	AluSq2	SINE/Alu	1	293	(20)	3529457
138	9.2	1.3	3.4	chr6	149975499	149975734	(20830245)	+	(GGAA)n	Simple_repeat	1	239	(0)	3529458
16	16.6	1.8	7.1	chr6	150028775	150028829	(20777150)	+	GA-rich	Low_complexity	1	56	(0)	3529534
205	28.7	2.2	0.3	chr6	150209406	150210037	(20595942)	+	(GT)n	Simple_repeat	1	646	(0)	3529857
14785	19.6	6.2	4.9	chr6	150328479	150331953	(20474026)	C	ERVL-B4-int	LTR/ERVL	(0)	5714	2195	3530043
693	16.1	2.3	6.6	chr6	151253389	151253525	(19552454)	C	FLAM_C	SINE/Alu	(12)	131	1	3531666
1988	12.2	3.1	1.4	chr6	151253722	151254008	(19551971)	C	AluSx	SINE/Alu	(20)	292	1	3531667
40189	8.7	0.7	1.0	chr6	152038917	152044388	(18761591)	C	HERVL-int	LTR/ERVL	(194)	5460	1	3532976
2291	10.0	0.3	0.7	chr6	154464435	154464744	(16341235)	+	AluSc	SINE/Alu	1	309	(0)	3536439
11574	15.4	2.7	3.7	chr6	154947266	154947615	(15858364)	C	L1M1	LINE/L1	(4328)	3237	2897	3537324
2298	11.8	0.0	0.3	chr6	154947616	154947920	(15858059)	+	AluSz	SINE/Alu	1	304	(8)	3537327
2274	9.2	0.0	0.0	chr6	157768758	157769041	(13036938)	+	AluSx1	SINE/Alu	1	284	(28)	3541435
50	0.0	0.0	0.0	chr6	157769042	157769086	(13036893)	+	(AAAT)n	Simple_repeat	1	45	(0)	3541436
16	8.7	0.0	0.0	chr6	157769202	157769226	(13036753)	+	(GCA)n	Simple_repeat	1	25	(0)	3541437
254	27.5	10.3	2.4	chr6	158026040	158026177	(12779802)	+	MIRc	SINE/MIR	19	150	(118)	3541843
390	27.4	9.3	0.0	chr6	158026287	158026432	(12779547)	+	MIR	SINE/MIR	24	184	(78)	3541844
51	29.6	4.2	1.8	chr6	158040160	158040374	(12765605)	+	(TG)n	Simple_repeat	1	224	(0)	3541856
1998	14.2	0.0	3.5	chr6	158838947	158839299	(11966680)	C	AluSz	SINE/Alu	(0)	312	2	3543212
104	25.1	6.1	2.2	chr6	158852933	158853360	(11952619)	+	(CA)n	Simple_repeat	1	454	(0)	3543240
19284	7.9	1.2	1.4	chr6	159659554	159660451	(11145528)	+	L1PBa1	LINE/L1	4657	5541	(1321)	3544396
13	14.8	2.3	6.8	chr6	159789358	159789400	(11016579)	+	(CGGCC)n	Simple_repeat	1	44	(0)	3544606
24890	8.6	0.4	0.1	chr6	160501907	160505098	(10300881)	C	HERVL-int	LTR/ERVL	(2453)	3201	1	3545496
189	35.9	1.3	0.0	chr6	161270156	161270233	(9535746)	+	L2c	LINE/L2	3309	3387	(0)	3546428
2192	10.7	0.0	4.2	chr6	161270487	161270795	(9535184)	+	AluSx	SINE/Alu	1	296	(16)	3546429
1470	21.5	4.6	8.2	chr6	161807444	161807920	(8998059)	C	MLT1C	LTR/ERVL-MaLR	(5)	462	4	3547249
244	18.9	0.8	0.0	chr6	165734971	165735440	(5070539)	+	(TAGG)n	Simple_repeat	1	474	(0)	3552315
1418	19.5	5.6	6.4	chr6	165735445	165735863	(5070116)	C	MLT2B4	LTR/ERVL	(34)	683	163	3552314
237	18.1	7.9	1.7	chr6	167337759	167338478	(3467501)	+	(AC)n	Simple_repeat	1	777	(0)	3554302
709	13.7	1.6	0.0	chr6	168401691	168401814	(2404165)	+	Ricksha_c	DNA/MULE-MuDR	255	380	(1668)	3555450
22	15.9	2.4	0.0	chr6	168401821	168401862	(2404117)	+	(CA)n	Simple_repeat	1	43	(0)	3555451
562	20.9	0.0	0.0	chr6	168401863	168401977	(2404002)	C	ERVL-B4-int	LTR/ERVL	(316)	5398	5284	3555449
20094	10.6	0.8	1.6	chr6	169099146	169101954	(1704025)	+	HERVL-int	LTR/ERVL	1	2787	(2867)	3556133
4804	21.1	3.9	2.2	chr6	169995172	169996705	(809274)	+	L1MB2	LINE/L1	4215	5776	(395)	3557051
145	5.3	8.6	0.7	chr6	169996706	169996984	(808995)	+	(TG)n	Simple_repeat	1	303	(0)	3557052
3469	21.7	5.8	1.2	chr6	169996985	169997301	(808678)	+	L1MB2	LINE/L1	5777	6128	(43)	3557051
31	17.9	0.0	0.0	chr6	170164102	170164158	(641821)	+	(CA)n	Simple_repeat	1	57	(0)	3557199
272	29.4	13.7	3.7	chr7	340050	340349	(159005624)	C	LTR16E1	LTR/ERVL	(2)	536	202	3558221
1238	26.2	5.1	5.4	chr7	440526	440916	(158905057)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3558346
426	21.2	2.1	1.9	chr7	653837	654886	(158691087)	+	(ATCACC)n	Simple_repeat	1	1072	(0)	3558661
2255	10.6	0.0	0.0	chr7	948702	948994	(158396979)	C	AluSg	SINE/Alu	(17)	293	1	3559101
243	34.7	5.2	1.3	chr7	949017	949165	(158396808)	+	L2b	LINE/L2	3192	3346	(29)	3559100
553	35.4	8.2	2.4	chr7	1175828	1176361	(158169612)	C	ERV3-16A3_I-int	LTR/ERVL	(2364)	2632	2061	3559429
24	8.4	0.0	0.0	chr7	2527316	2527353	(156818620)	+	(GTGCGT)n	Simple_repeat	1	38	(0)	3561579
448	18.6	1.8	0.2	chr7	2849955	2850843	(156495130)	+	(CATCAC)n	Simple_repeat	1	905	(0)	3562115
358	37.8	5.0	0.5	chr7	3899363	3899572	(155446401)	+	MIRb	SINE/MIR	27	246	(22)	3563986
2412	22.0	8.9	2.7	chr7	5051798	5052741	(154293232)	C	L1MEc	LINE/L1	(3404)	2915	1928	3566121
255	33.3	0.8	4.1	chr7	6447537	6447658	(152898315)	+	MIR	SINE/MIR	109	226	(36)	3569390
432	27.3	16.4	6.0	chr7	7566192	7566577	(151779396)	+	L2b	LINE/L2	2940	3373	(2)	3571258
1560	32.7	5.0	0.3	chr7	11243769	11244336	(148101637)	+	ERVL-E-int	LTR/ERVL	2134	2729	(2938)	3575977
34106	6.0	0.4	0.3	chr7	11594341	11598567	(147747406)	+	HERVL-int	LTR/ERVL	1	4231	(1423)	3576373
18523	17.1	2.5	0.5	chr7	12145322	12148494	(147197479)	C	ERVL-B4-int	LTR/ERVL	(2476)	3238	1	3577046
21201	6.3	3.0	2.1	chr7	26998385	27000000	(132345973)	+	HERVL-int	LTR/ERVL	1295	2955	(2699)	3597852
21	25.5	7.1	3.0	chr7	27168832	27168957	(132177016)	+	GA-rich	Low_complexity	1	135	(0)	3598074
47	0.0	0.0	0.0	chr7	27169094	27169133	(132176840)	+	(GT)n	Simple_repeat	1	40	(0)	3598075
402	16.5	10.4	0.1	chr7	27431269	27431379	(131914594)	+	MIR	SINE/MIR	78	202	(66)	3598489
526	28.0	13.0	2.7	chr7	28809655	28809874	(130536099)	+	MIRb	SINE/MIR	17	262	(6)	3600605
1147	26.9	13.6	0.9	chr7	36164080	36164521	(123181452)	C	Tigger13a	DNA/TcMar-Tigger	(263)	508	2	3611833
53	0.0	0.0	0.0	chr7	43304460	43304507	(116041466)	+	(TTAT)n	Simple_repeat	1	48	(0)	3622434
2098	11.2	0.0	1.1	chr7	43304509	43304793	(116041180)	C	AluSx	SINE/Alu	(30)	282	1	3622435
274	30.4	4.3	0.9	chr7	43728593	43728705	(115617268)	C	L2	LINE/L2	(499)	2920	2804	3623063
250	33.0	18.8	0.0	chr7	44250864	44251036	(115094937)	C	L3	LINE/CR1	(2115)	1984	1772	3623990
1943	11.4	3.8	1.4	chr7	45059463	45059742	(114286231)	+	AluJb	SINE/Alu	1	287	(25)	3625434
6307	20.2	9.6	8.7	chr7	45059766	45061445	(114284528)	C	L1MCa	LINE/L1	(4379)	2129	458	3625432
719	27.9	6.5	3.8	chr7	45151131	45151618	(114194355)	C	ERV3-16A3_I-int	LTR/ERVL	(304)	4922	4324	3625571
1503	13.4	5.2	0.4	chr7	45549046	45549285	(113796688)	C	L1PREC2	LINE/L1	(1787)	4359	4108	3626080
726	12.2	4.5	0.0	chr7	45549288	45549394	(113796579)	C	MER41B	LTR/ERV1	(1)	633	522	3626081
25933	5.9	0.2	0.1	chr7	45549395	45552506	(113793467)	+	HERVL-int	LTR/ERVL	2540	5654	(0)	3626082
1320	35.3	6.1	4.3	chr7	49030348	49031123	(110314850)	C	ERVL-E-int	LTR/ERVL	(2606)	3061	2254	3630619
5428	20.2	0.8	1.4	chr7	52143786	52144812	(107201161)	+	ERVL-int	LTR/ERVL	1989	3009	(2748)	3634519
26052	10.6	1.0	0.3	chr7	53905106	53908707	(105437266)	+	HERVL-int	LTR/ERVL	2029	5654	(0)	3636791
3127	9.8	1.2	0.2	chr7	55285381	55285808	(104060165)	C	MER57A1	LTR/ERV1	(0)	432	1	3638403
231	26.7	7.9	9.0	chr7	55285810	55286064	(104059909)	+	L1ME4a	LINE/L1	5796	6047	(77)	3638401
1837	32.1	2.1	2.4	chr7	67840051	67840692	(91505281)	+	ERVL-E-int	LTR/ERVL	1900	2642	(3025)	3653129
2889	34.5	9.1	2.1	chr7	67908255	67909455	(91436518)	+	ERVL-E-int	LTR/ERVL	2195	3473	(2194)	3653270
1672	17.9	2.9	0.0	chr7	69110306	69110573	(90235400)	+	AluJr	SINE/Alu	1	276	(36)	3655936
514	28.1	4.5	4.5	chr7	70402601	70402820	(88943153)	+	MIRb	SINE/MIR	1	220	(48)	3658261
2358	9.5	0.0	0.3	chr7	73419743	73420047	(85925926)	+	AluSx1	SINE/Alu	1	304	(8)	3664585
12	25.7	3.9	0.0	chr7	73420105	73420119	(85925854)	+	GA-rich	Low_complexity	1	16	(0)	3664586
53	5.3	0.0	0.0	chr7	73420120	73420178	(85925795)	+	(GT)n	Simple_repeat	1	59	(0)	3664587
12	25.7	3.9	0.0	chr7	73420179	73420214	(85925759)	+	GA-rich	Low_complexity	17	53	(0)	3664588
287	37.8	2.6	3.6	chr7	73420317	73420455	(85925518)	C	MIR	SINE/MIR	(36)	226	89	3664589
2427	21.8	8.9	2.9	chr7	75521015	75521958	(83824015)	+	L1MEc	LINE/L1	1928	2915	(3404)	3669830
1556	22.8	6.4	3.6	chr7	75521973	75522551	(83823422)	+	L1MC4	LINE/L1	7455	8041	(1)	3669833
1663	10.4	9.6	2.5	chr7	75624926	75625204	(83720769)	C	AluSx1	SINE/Alu	(1)	311	11	3670088
407	10.9	0.0	0.0	chr7	75625215	75625269	(83720704)	C	AluJo	SINE/Alu	(188)	124	70	3670089
1890	17.1	5.4	1.1	chr7	79046142	79046513	(80299460)	+	MLT1B	LTR/ERVL-MaLR	2	390	(0)	3676256
472	32.0	6.7	0.7	chr7	79046570	79046723	(80299250)	C	MIRb	SINE/MIR	(101)	167	4	3676257
233	11.3	5.9	0.6	chr7	95204594	95205036	(64140937)	+	(AC)n	Simple_repeat	1	469	(0)	3697631
2549	7.4	0.7	0.0	chr7	98593988	98594297	(60751676)	+	AluSx	SINE/Alu	1	312	(0)	3702952
833	26.4	5.0	2.0	chr7	98594411	98594661	(60751312)	C	HERV16-int	LTR/ERVL	(3837)	1159	901	3702953
752	30.5	2.9	2.0	chr7	98594835	98595138	(60750835)	C	HERV16-int	LTR/ERVL	(4333)	663	357	3702953
3297	7.2	2.3	2.5	chr7	99471161	99471603	(59874370)	+	L1PA8A	LINE/L1	5688	6129	(2)	3704800
2035	5.2	1.5	3.4	chr7	99471610	99471877	(59874096)	+	AluSx1	SINE/Alu	39	301	(11)	3704801
33	14.5	0.0	0.0	chr7	100167981	100168005	(59177968)	+	(GAGA)n	Simple_repeat	1	25	(0)	3706002
31	0.0	0.0	0.0	chr7	100168006	100168032	(59177941)	+	(AC)n	Simple_repeat	1	27	(0)	3706003
33	14.5	0.0	0.0	chr7	100168033	100168068	(59177905)	+	(GAGA)n	Simple_repeat	2	37	(0)	3706004
27	6.1	0.0	0.0	chr7	100478316	100478350	(58867623)	+	(AG)n	Simple_repeat	1	35	(0)	3706675
60	0.0	0.0	0.0	chr7	100478351	100478401	(58867572)	+	(GT)n	Simple_repeat	1	51	(0)	3706676
1079	22.9	4.5	6.8	chr7	100517240	100517442	(58828531)	C	AluJr	SINE/Alu	(118)	194	1	3706778
293	33.3	4.1	4.6	chr7	100517503	100517528	(58828445)	+	ERVL-E-int	LTR/ERVL	2605	2630	(3037)	3706780
442	25.9	5.3	0.0	chr7	100517529	100517636	(58828337)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	3706781
293	33.3	4.1	4.6	chr7	100517637	100517804	(58828169)	+	ERVL-E-int	LTR/ERVL	2631	2798	(2869)	3706780
320	21.3	9.9	2.3	chr7	100521134	100521263	(58824710)	C	HAL1	LINE/L1	(443)	2064	1924	3706788
276	23.6	0.0	0.0	chr7	100521311	100521365	(58824608)	C	HAL1	LINE/L1	(568)	1939	1885	3706788
595	28.5	4.3	0.0	chr7	100521426	100521625	(58824348)	C	HAL1	LINE/L1	(616)	1891	1683	3706788
1942	16.0	1.0	0.7	chr7	100798830	100799135	(58546838)	C	AluJr	SINE/Alu	(5)	307	1	3707399
84	11.2	1.9	2.5	chr7	100799155	100799286	(58546687)	+	(TTCC)n	Simple_repeat	1	203	(0)	3707400
35	19.3	2.7	0.0	chr7	100799287	100799359	(58546614)	+	(CT)n	Simple_repeat	1	75	(0)	3707401
437	17.4	0.0	0.0	chr7	100799362	100799430	(58546543)	C	AluJo	SINE/Alu	(19)	293	225	3707402
34	22.6	0.0	0.0	chr7	101159957	101160028	(58185945)	+	(CA)n	Simple_repeat	1	72	(0)	3708132
1641	15.7	6.7	0.8	chr7	101667691	101667958	(57678015)	+	AluJr	SINE/Alu	1	285	(27)	3709363
1024	25.1	3.3	4.2	chr7	101667959	101667974	(57677999)	C	L2a	LINE/L2	(316)	3110	3097	3709362
19855	9.8	0.9	0.3	chr7	104687991	104691770	(54654203)	+	HERVL-int	LTR/ERVL	106	4013	(1641)	3714475
25629	16.0	2.6	1.1	chr7	106819835	106822678	(52523295)	+	ERVL-B4-int	LTR/ERVL	1414	4304	(1410)	3718128
42308	7.0	0.7	0.7	chr7	107732828	107736660	(51609313)	+	HERVL-int	LTR/ERVL	1	3835	(1819)	3719534
29643	7.2	0.5	0.3	chr7	108672463	108676396	(50669577)	+	HERVL-int	LTR/ERVL	1716	5654	(0)	3720875
824	29.4	8.0	9.2	chr7	112196182	112196755	(47149218)	C	L1M6	LINE/L1	(5718)	778	214	3725434
14	15.4	2.6	2.6	chr7	117779305	117779342	(41566631)	+	(ATTTTCT)n	Simple_repeat	1	39	(0)	3733009
197	29.0	2.8	8.0	chr7	121394081	121394155	(37951818)	+	L2c	LINE/L2	3291	3361	(26)	3737600
41014	8.3	0.9	0.3	chr7	122203020	122208641	(37137332)	C	HERVL-int	LTR/ERVL	(0)	5654	1	3738785
6210	17.3	3.0	0.9	chr7	122290095	122291314	(37054659)	C	L1M3f	LINE/L1	(4672)	1577	4	3738912
925	27.5	2.1	1.4	chr7	122291349	122291632	(37054341)	C	ERVL-E-int	LTR/ERVL	(3084)	2583	2298	3738907
1888	25.9	6.3	3.4	chr7	122932697	122933699	(36412274)	C	L1ME4c	LINE/L1	(1790)	4356	3275	3739744
6493	16.5	2.2	1.2	chr7	124019633	124020800	(35325173)	+	ERVL-B4-int	LTR/ERVL	2003	3182	(2575)	3741303
30513	11.1	1.6	1.3	chr7	124615083	124620015	(34725958)	+	HERVL-int	LTR/ERVL	1	4965	(702)	3742080
1553	6.5	0.0	0.5	chr7	125940695	125940896	(33405077)	+	HERVL-int	LTR/ERVL	2723	2923	(2731)	3743793
15923	10.3	1.5	0.1	chr7	125940888	125943076	(33402897)	C	HERVL-int	LTR/ERVL	(2966)	2688	468	3743795
1477	20.6	4.9	6.2	chr7	128194815	128195269	(31150704)	C	L1MEf	LINE/L1	(4609)	2724	2276	3746776
1843	12.4	4.4	3.8	chr7	128195270	128195587	(31150386)	C	THE1B	LTR/ERVL-MaLR	(42)	322	3	3746777
15	0.0	0.0	0.0	chr7	128360988	128361004	(30984969)	+	(CA)n	Simple_repeat	1	17	(0)	3747073
25	3.4	0.0	0.0	chr7	128361074	128361103	(30984870)	+	(CT)n	Simple_repeat	1	30	(0)	3747074
43	0.0	0.0	0.0	chr7	128361104	128361140	(30984833)	+	(CA)n	Simple_repeat	1	37	(0)	3747075
31	31.6	2.4	0.8	chr7	128361162	128361284	(30984689)	+	(CA)n	Simple_repeat	1	126	(0)	3747075
45728	6.1	1.4	0.3	chr7	129444646	129450234	(29895739)	C	HERVL-int	LTR/ERVL	(0)	5654	1	3749160
160	28.1	3.2	4.6	chr7	130152141	130152602	(29193371)	+	A-rich	Low_complexity	70	522	(0)	3750677
235	15.2	7.6	3.2	chr7	130152603	130152803	(29193170)	+	(CA)n	Simple_repeat	800	1152	(96)	3750676
271	20.4	0.0	0.0	chr7	130698804	130698852	(28647121)	+	ERVL-B4-int	LTR/ERVL	2572	2620	(3034)	3751503
269	27.3	17.6	4.3	chr7	130698892	130699052	(28646921)	+	LTR50	LTR/ERVL	45	231	(564)	3751504
264	19.0	0.0	9.4	chr7	131015214	131015277	(28330696)	+	L1ME3G	LINE/L1	613	674	(218)	3751974
1103	21.2	0.0	0.0	chr7	131015314	131015516	(28330457)	+	MER3	DNA/hAT-Charlie	5	207	(2)	3751975
269	15.7	8.8	2.2	chr7	131653945	131654761	(27691212)	+	(TG)n	Simple_repeat	1	889	(0)	3753223
19	7.4	4.2	6.0	chr7	134500348	134500395	(24845578)	+	(ATATAC)n	Simple_repeat	1	50	(0)	3757577
2010	15.0	13.1	0.0	chr7	134500406	134500778	(24845195)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	4	3757578
1527	29.3	13.5	5.0	chr7	134775733	134776617	(24569356)	C	L1ME3Cz	LINE/L1	(1561)	4585	3641	3758009
234	34.9	3.5	2.2	chr7	137862889	137863111	(21482862)	C	L1MEj	LINE/L1	(1418)	742	517	3762501
1412	17.4	0.4	1.7	chr7	138780696	138780936	(20565037)	+	AluJb	SINE/Alu	75	312	(0)	3764304
2357	12.6	0.3	0.0	chr7	138780937	138781269	(20564704)	C	ERVL-B4-int	LTR/ERVL	(2854)	2860	2527	3764302
860	17.4	5.3	6.7	chr7	138781279	138781317	(20564656)	C	L1MC	LINE/L1	(1873)	4273	4248	3764305
2347	9.3	0.3	1.3	chr7	138781318	138781629	(20564344)	C	AluSg7	SINE/Alu	(0)	309	1	3764306
40	9.0	0.0	1.6	chr7	148921305	148921365	(10424608)	+	(CA)n	Simple_repeat	1	61	(0)	3779608
2085	14.4	12.6	0.8	chr7	149310597	149310973	(10035000)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3780499
658	1.4	0.0	0.0	chr7	149707669	149707740	(9638233)	+	tRNA-Cys-TGY	tRNA	1	72	(3)	3781072
596	23.4	10.5	2.1	chr7	149707985	149708176	(9637797)	C	MER63A	DNA/hAT-Blackjack	(0)	210	1	3781073
328	16.4	7.8	3.8	chr7	150003183	150004275	(9341698)	+	(GT)n	Simple_repeat	1	1178	(0)	3781444
473	12.1	9.2	0.8	chr7	150359153	150360260	(8985713)	+	(CA)n	Simple_repeat	1	1210	(0)	3781942
1183	17.8	6.2	3.2	chr7	150360262	150360511	(8985462)	C	MER67C	LTR/ERV1	(220)	491	234	3781941
231	30.3	6.4	3.6	chr7	151140500	151140636	(8205337)	C	L3b	LINE/CR1	(341)	4891	4751	3782957
22	27.1	4.6	5.1	chr7	151168621	151168771	(8177202)	+	(TTCCTC)n	Simple_repeat	1	158	(0)	3782991
18	17.9	3.9	1.9	chr7	151168783	151168834	(8177139)	+	(TGTC)n	Simple_repeat	1	54	(0)	3782992
61	0.0	0.0	0.0	chr7	151875563	151875614	(7470359)	+	(GT)n	Simple_repeat	1	52	(0)	3784164
16	4.2	8.0	0.0	chr7	151947940	151947964	(7398009)	+	(TC)n	Simple_repeat	1	27	(0)	3784302
2141	11.5	0.3	1.1	chr7	152332565	152332851	(7013122)	+	AluSp	SINE/Alu	2	286	(27)	3784897
48	0.0	0.0	0.0	chr7	152332852	152332892	(7013081)	+	(AC)n	Simple_repeat	1	41	(0)	3784898
219	20.5	5.0	2.3	chr7	152912336	152912994	(6432979)	+	(GT)n	Simple_repeat	1	692	(0)	3786187
240	22.1	4.2	0.5	chr7	155918469	155919104	(3426869)	+	(GT)n	Simple_repeat	1	663	(0)	3790248
14160	14.8	2.5	0.6	chr7	156819636	156821920	(2524053)	+	ERVL-B4-int	LTR/ERVL	1894	4224	(1490)	3791384
181	34.8	11.4	1.7	chr7	157205131	157205311	(2140662)	+	MIRc	SINE/MIR	2	202	(66)	3792054
402	7.2	10.2	2.5	chr7	157298928	157299839	(2046134)	+	(TG)n	Simple_repeat	1	981	(0)	3792224
2391	10.6	0.0	0.0	chr7	157344981	157345292	(2000681)	C	AluSq2	SINE/Alu	(0)	313	2	3792350
1400	19.2	0.4	2.3	chr7	157345300	157345565	(2000408)	C	AluJo	SINE/Alu	(0)	312	52	3792351
556	16.0	7.4	0.8	chr7	157345567	157345692	(2000281)	C	L1M3	LINE/L1	(930)	5210	5076	3792352
242	19.6	4.5	2.6	chr7	158128942	158129631	(1216342)	+	(ACCACAC)n	Simple_repeat	1	721	(0)	3793014
914	27.1	13.3	5.4	chr8	329594	330060	(144808576)	+	HAL1	LINE/L1	1308	1852	(655)	3794709
306	32.8	7.9	9.7	chr8	1366239	1366714	(143771922)	C	L2c	LINE/L2	(0)	3387	2921	3795681
324	34.9	5.8	4.1	chr8	6943881	6944098	(138194538)	C	LTR53-int	LTR/ERVL	(1692)	1637	1416	3802820
9198	25.8	5.2	6.8	chr8	8359471	8362615	(136776021)	C	HERVI-int	LTR/ERV1	(4692)	3093	1	3804586
2213	19.8	4.2	10.4	chr8	8362617	8363270	(136775366)	C	LTR10E	LTR/ERV1	(21)	612	1	3804586
226	13.9	5.6	3.0	chr8	8646859	8647398	(136491238)	+	(AC)n	Simple_repeat	1	570	(0)	3805075
28	24.9	4.7	4.9	chr8	11474777	11474905	(133663731)	+	GA-rich	Low_complexity	1	178	(0)	3809640
14	21.6	0.0	6.0	chr8	11474906	11474955	(133663681)	+	G-rich	Low_complexity	1	50	(0)	3809641
11	9.6	8.6	2.6	chr8	13276803	13276837	(131861799)	+	(GCAGGTG)n	Simple_repeat	1	38	(0)	3812420
1750	16.4	4.0	0.3	chr8	13277042	13277334	(131861302)	+	AluJr	SINE/Alu	1	304	(8)	3812421
59	17.9	1.8	0.0	chr8	18018823	18018934	(127119702)	+	(TA)n	Simple_repeat	1	114	(0)	3819070
454	30.6	7.1	3.5	chr8	18018942	18019198	(127119438)	+	PRIMA4-int	LTR/ERV1	3440	3706	(4564)	3819071
389	34.5	6.5	6.1	chr8	18019271	18019322	(127119314)	+	ERV24B_Prim-int	LTR/ERV1	3370	3422	(4153)	3819072
3079	14.9	3.8	1.0	chr8	18019323	18019836	(127118800)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3819073
954	18.6	0.6	3.5	chr8	18618729	18618900	(126519736)	C	AluJr	SINE/Alu	(60)	252	86	3819895
2262	10.6	0.0	0.0	chr8	21954354	21954637	(123183999)	+	AluSg	SINE/Alu	1	284	(26)	3825345
30	0.0	2.8	2.7	chr8	21954638	21954673	(123183963)	+	(AAAT)n	Simple_repeat	1	37	(0)	3825346
2330	10.2	0.0	0.0	chr8	22483283	22483585	(122655051)	C	AluY	SINE/Alu	(8)	303	1	3826337
2333	19.6	6.8	6.8	chr8	22483586	22483803	(122654833)	C	MER101-int	LTR/ERV1	(4136)	2503	2281	3826336
19819	16.1	2.5	3.5	chr8	23034746	23035143	(122103493)	+	ERVL-B4-int	LTR/ERVL	2273	2672	(3042)	3827245
2130	14.4	0.0	0.0	chr8	23035144	23035441	(122103195)	C	AluSz6	SINE/Alu	(14)	298	1	3827247
229	29.7	9.4	6.8	chr8	23041820	23042025	(122096611)	+	L2	LINE/L2	2161	2372	(1047)	3827257
20	27.2	3.2	3.1	chr8	23074911	23075003	(122063633)	+	(CTCT)n	Simple_repeat	1	96	(0)	3827308
21	19.8	0.0	0.0	chr8	23074963	23075011	(122063625)	+	(CT)n	Simple_repeat	1	49	(0)	3827309
19	10.7	5.0	0.0	chr8	24521180	24521224	(120617412)	+	(GTTTTA)n	Simple_repeat	1	47	(0)	3829546
1977	15.7	0.0	1.3	chr8	26149279	26149591	(118989045)	C	AluJb	SINE/Alu	(3)	309	1	3832187
4317	16.5	8.4	6.1	chr8	26149719	26150658	(118987978)	C	L1MCa	LINE/L1	(5544)	964	1	3832188
53	22.1	1.4	7.4	chr8	26449316	26449527	(118689109)	+	G-rich	Low_complexity	1	215	(0)	3832761
19	0.0	0.0	0.0	chr8	27870215	27870235	(117268401)	+	(T)n	Simple_repeat	1	21	(0)	3835139
79	40.1	0.0	1.6	chr8	28401356	28401720	(116736916)	+	(GT)n	Simple_repeat	1	365	(0)	3836059
1913	16.3	0.0	1.3	chr8	28660081	28660381	(116478255)	+	AluJr	SINE/Alu	1	297	(15)	3836623
14	35.3	4.2	1.0	chr8	28660426	28660520	(116478116)	+	(CATA)n	Simple_repeat	1	99	(0)	3836624
15	25.6	0.0	0.0	chr8	28660488	28660521	(116478115)	+	(AC)n	Simple_repeat	1	34	(0)	3836625
1283	16.9	6.1	0.4	chr8	28660528	28660789	(116477847)	C	L1MB3	LINE/L1	(3)	6180	5903	3836626
4431	17.4	6.8	2.0	chr8	30057374	30058176	(115080460)	C	ERVL-B4-int	LTR/ERVL	(2601)	3113	2270	3838963
1318	21.6	8.2	2.3	chr8	30058177	30058466	(115080170)	C	MLT1C	LTR/ERVL-MaLR	(62)	405	93	3838964
199	20.3	1.7	5.4	chr8	36915924	36916503	(108222133)	+	GA-rich	Low_complexity	1	558	(0)	3849567
3574	29.2	6.5	3.3	chr8	37200874	37201486	(107937150)	C	ERVL-E-int	LTR/ERVL	(2953)	2714	2082	3849982
137	19.3	0.4	0.0	chr8	37514036	37514299	(107624337)	+	(AC)n	Simple_repeat	1	265	(0)	3850446
549	28.6	7.3	4.0	chr8	37603832	37604066	(107534570)	C	MIRb	SINE/MIR	(11)	257	2	3850613
635	25.8	11.7	0.0	chr8	37604435	37604616	(107534020)	+	MIR	SINE/MIR	16	221	(41)	3850614
1875	19.3	0.0	0.0	chr8	37678206	37678510	(107460126)	+	AluJb	SINE/Alu	7	311	(1)	3850767
23	16.2	0.0	2.0	chr8	37678516	37678565	(107460071)	+	GA-rich	Low_complexity	1	50	(0)	3850768
693	25.4	3.0	4.5	chr8	37678566	37678782	(107459854)	+	MIR	SINE/MIR	2	203	(59)	3850769
2551	5.4	0.0	0.0	chr8	37898373	37898670	(107239966)	+	AluSc	SINE/Alu	1	298	(11)	3851170
2280	6.7	1.3	5.7	chr8	37898671	37898839	(107239797)	+	AluSx	SINE/Alu	145	300	(12)	3851169
298	29.8	0.8	2.1	chr8	38502520	38503544	(106635092)	+	(GT)n	Simple_repeat	1	1033	(0)	3852412
213	26.6	0.0	1.5	chr8	38717320	38717384	(106421252)	C	MamTip2	DNA/hAT-Tip100	(99)	206	143	3852816
298	35.8	6.4	3.5	chr8	38717567	38717763	(106420873)	C	MIR3	SINE/MIR	(5)	203	1	3852817
271	17.7	4.3	1.1	chr8	38918205	38918825	(106219811)	+	(AC)n	Simple_repeat	1	648	(0)	3853197
10683	15.8	7.0	1.3	chr8	39057921	39061531	(106077105)	C	ERVL-B4-int	LTR/ERVL	(0)	5714	1897	3853446
1160	30.3	8.6	9.2	chr8	41417089	41417950	(103720686)	+	ERV3-16A3_I-int	LTR/ERVL	1636	2501	(2725)	3856947
1068	20.6	5.0	2.8	chr8	41417978	41418231	(103720405)	+	Kanga2_a	DNA/TcMar-Tc2	14	273	(615)	3856949
138	26.5	1.1	0.5	chr8	41827625	41827993	(103310643)	+	(CA)n	Simple_repeat	1	373	(0)	3857667
2002	11.6	0.0	5.7	chr8	41847887	41848187	(103290449)	+	AluSz6	SINE/Alu	1	284	(28)	3857706
47	0.0	0.0	0.0	chr8	41848188	41848230	(103290406)	+	(AAAT)n	Simple_repeat	1	43	(0)	3857707
12211	16.9	6.5	4.7	chr8	43109840	43110635	(102028001)	C	MER41-int	LTR/ERV1	(2286)	3660	3013	3860135
2035	9.8	1.7	2.4	chr8	43110636	43110931	(102027705)	+	AluSq2	SINE/Alu	1	294	(19)	3860136
472	20.6	3.7	1.5	chr8	43124334	43124466	(102014170)	C	L1M1	LINE/L1	(4085)	3481	3346	3860154
279	18.0	3.9	0.0	chr8	43124467	43124516	(102014120)	C	5S	rRNA	(59)	62	11	3860157
3971	12.4	2.5	4.8	chr8	43124520	43125207	(102013429)	C	LTR76	LTR/ERV1	(3)	672	1	3860158
1392	10.1	2.0	1.5	chr8	52568177	52568377	(92570259)	C	MLT2A1	LTR/ERVL	(44)	400	199	3868327
346	2.4	0.0	0.0	chr8	52568377	52568417	(92570219)	C	MLT2A1	LTR/ERVL	(412)	41	1	3868327
20923	6.9	1.1	2.1	chr8	52568419	52571121	(92567515)	C	HERVL-int	LTR/ERVL	(2981)	2673	1	3868328
182	32.9	0.5	0.9	chr8	54278252	54278903	(90859733)	+	(CACACA)n	Simple_repeat	1	655	(0)	3870829
522	24.8	16.9	0.9	chr8	57898669	57898896	(87239740)	C	ORSL	DNA/hAT-Tip100	(3)	272	1	3875890
2062	16.6	4.1	1.8	chr8	61094522	61094902	(84043734)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	3880172
319	23.8	3.7	7.1	chr8	61094903	61094922	(84043714)	C	MIRb	SINE/MIR	(158)	110	90	3880171
4891	25.1	6.8	4.2	chr8	64811247	64813165	(80325471)	C	ERVL-E-int	LTR/ERVL	(1696)	3971	2063	3884964
16	28.9	1.3	3.9	chr8	65838029	65838105	(79300531)	+	A-rich	Low_complexity	1	78	(0)	3886493
257	33.7	1.1	2.2	chr8	65838190	65838280	(79300356)	C	L2c	LINE/L2	(0)	3387	3298	3886494
2009	23.0	5.2	0.0	chr8	66223848	66224286	(78914350)	C	LTR16B	LTR/ERVL	(0)	463	1	3887029
324	26.8	10.6	3.8	chr8	66415644	66415775	(78722861)	C	MIRb	SINE/MIR	(0)	268	127	3887332
1009	17.9	1.3	11.8	chr8	66415792	66415858	(78722778)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	323	3887333
2188	11.5	0.3	0.0	chr8	66415859	66416144	(78722492)	+	AluSz	SINE/Alu	1	287	(25)	3887334
299	25.9	4.0	14.4	chr8	66521727	66521790	(78616846)	+	MIR	SINE/MIR	15	79	(183)	3887532
76	0.0	0.0	0.0	chr8	66521791	66521855	(78616781)	+	(GA)n	Simple_repeat	1	65	(0)	3887533
589	25.1	2.5	4.0	chr8	66521856	66522052	(78616584)	+	MIRc	SINE/MIR	80	261	(7)	3887532
431	24.1	6.5	1.7	chr8	70343884	70344001	(74794635)	C	Tigger16b	DNA/TcMar-Tigger	(27)	309	186	3893649
361	32.3	4.2	3.7	chr8	71463350	71463513	(73675123)	+	L3	LINE/CR1	3927	4091	(8)	3895234
68	0.0	0.0	0.0	chr8	71463576	71463633	(73675003)	+	(TC)n	Simple_repeat	1	58	(0)	3895235
15	18.3	0.0	3.0	chr8	71463650	71463699	(73674937)	+	(CA)n	Simple_repeat	1	48	(0)	3895236
415	30.4	4.5	7.3	chr8	74238329	74238610	(70900026)	+	L2b	LINE/L2	3090	3404	(22)	3899422
263	23.5	1.4	0.0	chr8	74238591	74238658	(70899978)	C	L2a	LINE/L2	(0)	3426	3358	3899423
1863	18.6	0.0	0.0	chr8	74238667	74238957	(70899679)	C	AluJr	SINE/Alu	(21)	291	1	3899424
322	34.9	5.6	5.2	chr8	75026981	75027210	(70111426)	+	L2c	LINE/L2	3107	3337	(50)	3900441
23186	18.7	2.9	2.8	chr8	88557418	88559862	(56578774)	+	ERVL-B4-int	LTR/ERVL	1705	4108	(1606)	3918774
36920	7.8	1.5	0.5	chr8	92765117	92769888	(52368748)	C	HERVL-int	LTR/ERVL	(273)	5381	563	3924268
466	31.2	10.6	1.5	chr8	94250879	94251083	(50887553)	C	MIRb	SINE/MIR	(15)	253	28	3926545
5119	5.6	0.1	0.1	chr8	95870616	95871275	(49267361)	C	HERVL-int	LTR/ERVL	(2615)	3039	2380	3929411
29492	5.9	0.4	2.4	chr8	100206048	100207667	(44930969)	+	HERVL-int	LTR/ERVL	2324	3892	(1762)	3936369
1881	8.3	0.7	17.4	chr8	100454194	100454556	(44684080)	+	AluSz	SINE/Alu	1	302	(10)	3936822
1123	24.1	3.0	9.9	chr8	100671999	100672504	(44466132)	+	MamRep1151	LTR?	15	484	(225)	3937229
1805	14.3	1.1	4.5	chr8	101422133	101422282	(43716354)	+	AluJb	SINE/Alu	134	276	(36)	3938730
143	13.9	1.7	3.6	chr8	101422286	101422549	(43716087)	+	GA-rich	Low_complexity	1	256	(0)	3938732
14030	20.1	5.7	4.8	chr8	106401353	106402808	(38735828)	C	ERVL-B4-int	LTR/ERVL	(2368)	3346	1769	3946476
2213	10.8	0.7	0.0	chr8	116776149	116776435	(28362201)	+	AluSq2	SINE/Alu	1	289	(24)	3960579
557	32.9	0.0	0.0	chr8	116776455	116776612	(28362024)	+	ERVL-E-int	LTR/ERVL	2509	2666	(3001)	3960577
1792	17.3	1.7	1.7	chr8	116776659	116776959	(28361677)	+	AluJr4	SINE/Alu	1	301	(11)	3960580
16	14.1	2.4	2.3	chr8	119415697	119415709	(25722927)	+	(TTTAT)n	Simple_repeat	5	16	(0)	3964785
12	34.4	2.1	4.1	chr8	119415834	119415929	(25722707)	+	(TCCC)n	Simple_repeat	1	98	(0)	3964786
402	23.9	5.2	0.9	chr8	119853581	119853690	(25284946)	C	MER5A1	DNA/hAT-Charlie	(2)	164	50	3965494
1982	15.6	7.1	0.6	chr8	122567498	122567851	(22570785)	C	THE1D	LTR/ERVL-MaLR	(2)	379	1	3970102
335	28.3	6.1	0.9	chr8	122567988	122568135	(22570501)	C	MIRb	SINE/MIR	(32)	236	71	3970103
2003	11.3	4.4	0.3	chr8	123591309	123591591	(21547045)	C	AluSz	SINE/Alu	(17)	295	1	3972197
1759	30.2	5.8	5.6	chr8	124207265	124208000	(20930636)	C	ERVL-E-int	LTR/ERVL	(2918)	2749	2012	3973293
23612	8.3	0.1	0.6	chr8	131156923	131158712	(13979924)	C	HERVL-int	LTR/ERVL	(2423)	3231	1456	3986407
295	22.9	6.2	7.1	chr8	132133993	132134105	(13004531)	+	MamRep1527	LTR	747	858	(111)	3987973
24	34.6	2.5	1.6	chr8	132174652	132174769	(12963867)	+	(TG)n	Simple_repeat	1	121	(0)	3988047
657	29.6	7.4	0.4	chr8	132174835	132175061	(12963575)	+	MIR	SINE/MIR	7	250	(12)	3988048
189	31.1	4.7	3.9	chr8	132246676	132246802	(12891834)	+	L2b	LINE/L2	3024	3151	(224)	3988205
215	31.2	7.0	0.0	chr8	132246878	132246957	(12891679)	+	MIRc	SINE/MIR	115	200	(68)	3988206
617	32.8	2.5	4.2	chr8	133551782	133552020	(11586616)	C	MIR	SINE/MIR	(1)	267	33	3990694
237	26.9	10.3	7.1	chr8	133552046	133552157	(11586479)	C	L2b	LINE/L2	(16)	3359	3244	3990695
2374	10.1	0.0	0.0	chr8	133562210	133562507	(11576129)	C	AluSc	SINE/Alu	(11)	298	1	3990720
212	23.5	0.0	17.1	chr8	133562508	133562540	(11576096)	+	MIR3	SINE/MIR	123	149	(59)	3990719
24	5.1	4.8	0.0	chr8	133562778	133562794	(11575842)	+	(TTTC)n	Simple_repeat	1	17	(0)	3990721
56	0.0	0.0	0.0	chr8	133562795	133562844	(11575792)	+	(TTCC)n	Simple_repeat	1	50	(0)	3990722
2235	12.4	0.0	0.3	chr8	133611578	133611891	(11526745)	+	AluSq2	SINE/Alu	1	313	(0)	3990837
234	23.8	2.4	2.4	chr8	133612135	133612216	(11526420)	+	MamRep564	Unknown	172	253	(104)	3990838
5066	9.3	2.1	5.9	chr8	134418637	134419186	(10719450)	+	L1PA12	LINE/L1	5490	6014	(154)	3992287
4451	31.0	3.8	3.5	chr8	134419194	134420842	(10717794)	C	ERVL-E-int	LTR/ERVL	(3113)	2554	902	3992284
11042	20.8	2.2	2.0	chr8	142899680	142900399	(2238237)	+	ERVL-B4-int	LTR/ERVL	2086	2799	(2915)	4005428
1352	5.6	0.6	0.0	chr8	142900400	142900579	(2238057)	+	L1PA5	LINE/L1	5974	6154	(0)	4005429
59	1.9	0.0	0.0	chr8	143516526	143516580	(1622056)	+	(CA)n	Simple_repeat	1	55	(0)	4006282
337	37.8	3.7	0.0	chr8	143889509	143889719	(1248917)	C	HERV16-int	LTR/ERVL	(2268)	2728	2481	4006799
41354	6.5	0.8	0.2	chr9	6099363	6104432	(132290285)	+	HERVL-int	LTR/ERVL	34	5132	(522)	4017530
330	27.1	11.1	2.0	chr9	13670376	13670522	(124724195)	+	MIRb	SINE/MIR	104	265	(3)	4027961
795	10.4	0.0	0.0	chr9	14850429	14850534	(123544183)	+	U6	snRNA	1	106	(1)	4029539
1418	7.0	1.1	0.0	chr9	14850536	14850721	(123543996)	+	L1PA10	LINE/L1	5964	6151	(17)	4029540
54	0.0	0.0	0.0	chr9	15552271	15552316	(122842401)	+	(GT)n	Simple_repeat	1	46	(0)	4030755
2010	34.2	6.9	1.4	chr9	16116913	16117987	(122276730)	C	ERVL-E-int	LTR/ERVL	(2746)	2921	1783	4031476
461	28.7	0.9	0.0	chr9	18393385	18393492	(120001225)	+	MER81	DNA/hAT-Blackjack	6	114	(0)	4034606
1845	17.9	3.6	0.3	chr9	20947298	20947673	(117447044)	+	L1MB3	LINE/L1	5795	6183	(0)	4038635
25853	7.5	0.4	1.7	chr9	21847327	21850874	(116543843)	+	HERVL-int	LTR/ERVL	1	3502	(2152)	4039782
17001	8.6	0.9	0.9	chr9	22833024	22834616	(115560101)	+	HERVL-int	LTR/ERVL	1725	3329	(2325)	4041011
185	17.2	0.0	0.0	chr9	26682414	26682442	(111712275)	C	MamRTE1	LINE/RTE-BovB	(1941)	1871	1843	4045984
323	36.8	3.1	0.6	chr9	33474215	33474370	(104920347)	+	L2c	LINE/L2	2572	2731	(688)	4055492
52	0.0	0.0	0.0	chr9	33474427	33474473	(104920244)	+	(TTTA)n	Simple_repeat	1	47	(0)	4055493
1809	13.8	0.0	0.0	chr9	33474481	33474755	(104919962)	C	AluSz	SINE/Alu	(37)	275	1	4055494
1628	10.6	2.1	0.8	chr9	35657504	35657740	(102736977)	+	AluJb	SINE/Alu	1	240	(72)	4059251
453	33.0	12.5	2.5	chr9	38290169	38290729	(100103988)	+	L2c	LINE/L2	2500	3148	(239)	4064319
1893	26.0	7.5	5.3	chr9	41468486	41469405	(96925312)	C	L1ME1	LINE/L1	(1)	6178	5244	4068662
535	27.7	12.9	1.2	chr9	70496271	70496515	(67898202)	C	LTR78B	LTR/ERV1	(708)	588	311	4083285
368	29.3	10.7	1.5	chr9	73813779	73813913	(64580804)	C	ERVL-int	LTR/ERVL	(1272)	4485	4337	4088556
1324	28.6	1.4	0.3	chr9	73813927	73814270	(64580447)	+	ERVL-E-int	LTR/ERVL	2474	2821	(2846)	4088555
257	25.3	1.1	9.0	chr9	84521273	84521372	(53873345)	+	MIRb	SINE/MIR	18	109	(159)	4104863
45835	7.0	0.2	0.3	chr9	85370598	85375725	(53018992)	C	HERVL-int	LTR/ERVL	(0)	5654	530	4106115
408	15.9	3.2	3.4	chr9	86052943	86053907	(52340810)	+	(CACAC)n	Simple_repeat	1	996	(0)	4107217
20	14.3	2.0	3.9	chr9	86354546	86354595	(52040122)	+	(CGCCC)n	Simple_repeat	1	51	(0)	4107753
1468	16.1	9.6	0.5	chr9	89220802	89221094	(49173623)	+	MLT1B	LTR/ERVL-MaLR	52	374	(0)	4112251
17	0.0	4.8	0.0	chr9	89679455	89679475	(48715242)	+	(CT)n	Simple_repeat	1	22	(0)	4112805
597	18.7	1.7	1.1	chr9	89679498	89679634	(48715083)	+	L1MC4	LINE/L1	7925	8042	(0)	4112806
347	32.0	2.3	5.2	chr9	90909707	90909841	(47484876)	C	MER5B	DNA/hAT-Charlie	(3)	175	45	4114441
400	9.8	0.0	0.0	chr9	90909851	90909901	(47484816)	+	AluYk11	SINE/Alu	1	51	(260)	4114442
765	17.6	11.5	4.1	chr9	90910071	90910365	(47484352)	C	MLT1B	LTR/ERVL-MaLR	(1)	389	1	4114443
2612	12.9	0.8	0.0	chr9	91103083	91103463	(47291254)	+	MLT1B	LTR/ERVL-MaLR	1	384	(6)	4114702
457	29.0	9.3	3.0	chr9	91103466	91103867	(47290850)	+	MLT1G1	LTR/ERVL-MaLR	107	592	(3)	4114701
15057	15.3	3.2	3.0	chr9	91547146	91549691	(46845026)	C	ERVL-B4-int	LTR/ERVL	(738)	4976	2423	4115359
4863	19.2	5.2	1.2	chr9	91549689	91551285	(46843432)	C	ERVL-B4-int	LTR/ERVL	(3986)	1728	1	4115359
17466	16.2	4.4	0.5	chr9	91985419	91988334	(46406383)	+	ERVL-B4-int	LTR/ERVL	2075	5107	(607)	4116034
5069	25.0	4.3	5.6	chr9	92983638	92985415	(45409302)	C	MER50-int	LTR/ERV1	(2664)	4541	2788	4117519
173	19.4	4.3	2.1	chr9	95557078	95557538	(42837179)	+	(AACAC)n	Simple_repeat	1	481	(0)	4121382
866	19.1	3.8	2.2	chr9	95695107	95695289	(42699428)	C	AluJr	SINE/Alu	(4)	308	123	4121594
2640	9.6	1.3	0.8	chr9	95695599	95695977	(42698740)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4121595
307	8.5	8.8	2.0	chr9	96026565	96027233	(42367484)	+	(CA)n	Simple_repeat	1	714	(0)	4122098
482	29.6	11.1	2.7	chr9	99068784	99069005	(39325712)	+	MIRb	SINE/MIR	1	243	(25)	4127786
443	34.2	6.0	4.8	chr9	99069143	99069554	(39325163)	C	L2c	LINE/L2	(41)	3346	2930	4127787
1575	15.5	12.4	1.6	chr9	100053410	100053718	(38340999)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	2	4129479
30348	6.4	1.6	1.0	chr9	100074354	100078175	(38316542)	+	HERVL-int	LTR/ERVL	1562	5420	(234)	4129513
1104	26.1	5.4	7.4	chr9	110545720	110546096	(27848621)	+	MLT1H	LTR/ERVL-MaLR	181	549	(0)	4146444
201	26.4	7.8	7.4	chr9	120381790	120381971	(18012746)	C	L2b	LINE/L2	(248)	3139	2946	4164929
280	28.2	4.1	8.7	chr9	120382062	120382267	(18012450)	C	L2b	LINE/L2	(569)	2850	2655	4164929
224	22.6	0.0	7.0	chr9	120382422	120382478	(18012239)	C	MIRc	SINE/MIR	(115)	153	101	4164930
2658	28.9	8.2	5.4	chr9	126261833	126262758	(12131959)	C	L1ME3Cz	LINE/L1	(2139)	4007	3046	4176135
32507	13.9	3.7	5.0	chr9	126568767	126572666	(11822051)	C	ERVL-B4-int	LTR/ERVL	(430)	5284	1312	4176605
278	34.0	2.6	3.9	chr9	129379363	129379518	(9015199)	+	L2b	LINE/L2	3222	3375	(0)	4182693
16	5.2	0.0	0.0	chr9	129379665	129379684	(9015033)	+	(TG)n	Simple_repeat	1	20	(0)	4182694
401	25.8	1.8	0.5	chr9	129456632	129457679	(8937038)	+	(ATGG)n	Simple_repeat	1	1067	(0)	4182874
582	12.4	7.5	2.5	chr9	130344245	130345650	(8049067)	+	(GT)n	Simple_repeat	1	1512	(0)	4184841
492	23.8	1.9	0.0	chr9	130658543	130658647	(7736070)	+	L2b	LINE/L2	3266	3372	(3)	4185533
518	28.0	5.6	0.6	chr9	131467265	131467433	(6927284)	+	MIRb	SINE/MIR	53	230	(38)	4187157
363	20.7	2.4	0.0	chr9	132068205	132068286	(6326431)	C	MIRb	SINE/MIR	(62)	206	123	4188157
593	30.9	13.2	2.9	chr9	132068394	132068907	(6325810)	C	L2c	LINE/L2	(584)	2835	2261	4188154
57	11.6	0.0	0.0	chr9	132162524	132162617	(6232100)	+	(GT)n	Simple_repeat	1	94	(0)	4188354
484	30.7	7.3	10.9	chr9	132211586	132211913	(6182804)	+	L2b	LINE/L2	3048	3363	(12)	4188446
30	9.2	0.0	0.0	chr9	132211914	132211959	(6182758)	+	(ATTC)n	Simple_repeat	1	46	(0)	4188447
484	30.7	7.3	10.9	chr9	132211960	132211970	(6182747)	+	L2b	LINE/L2	3364	3374	(1)	4188446
1551	11.8	0.4	2.1	chr9	133324415	133324656	(5070061)	+	MER1B	DNA/hAT-Charlie	93	330	(9)	4190411
1279	21.1	5.1	6.6	chr9	133324805	133325185	(5069532)	+	MLT1B	LTR/ERVL-MaLR	16	390	(0)	4190412
2447	5.8	0.7	0.0	chr9	133347238	133347531	(5047186)	+	AluSx1	SINE/Alu	3	298	(14)	4190449
490	28.8	1.7	0.1	chr9	133382445	133383799	(5010918)	+	(GTG)n	Simple_repeat	1	1378	(0)	4190491
890	4.4	6.3	0.8	chr9	134103374	134104735	(4289982)	+	(ATCC)n	Simple_repeat	1	1448	(0)	4191565
286	8.8	9.5	2.4	chr9	134182441	134183092	(4211625)	+	(TG)n	Simple_repeat	1	714	(0)	4191688
397	24.8	0.1	0.2	chr9	134305527	134306423	(4088294)	+	(ATG)n	Simple_repeat	1	898	(0)	4191875
201	30.2	8.0	0.1	chr9	134456036	134456153	(3938564)	C	MIRb	SINE/MIR	(133)	135	3	4192038
24696	8.4	0.8	1.4	chr9	134924024	134926313	(3468404)	+	HERVL-int	LTR/ERVL	2291	4602	(1052)	4192556
2435	8.6	0.0	1.3	chr9	135458010	135458323	(2936394)	C	AluSc8	SINE/Alu	(1)	310	1	4193258
5025	10.0	0.3	2.2	chr9	135458330	135459015	(2935702)	C	L1PA13	LINE/L1	(0)	6163	5481	4193259
29	0.0	0.0	0.0	chr9	135967784	135967808	(2426909)	+	(GT)n	Simple_repeat	1	25	(0)	4193861
76	36.3	0.9	2.1	chr9	135967825	135968156	(2426561)	+	(TG)n	Simple_repeat	1	335	(0)	4193862
180	25.0	5.1	1.8	chr9	136513116	136513172	(1881545)	C	OldhAT1	DNA/hAT-Ac	(899)	1949	1891	4194452
212	28.3	1.5	1.2	chr9	136569356	136569794	(1824923)	+	(TG)n	Simple_repeat	1	440	(0)	4194502
35	1.6	7.3	4.1	chr9	136569795	136569862	(1824855)	+	(GCATGTGT)n	Simple_repeat	1	73	(0)	4194503
212	28.3	1.5	1.2	chr9	136569863	136570080	(1824637)	+	(TG)n	Simple_repeat	1	219	(0)	4194504
2170	12.2	0.0	1.9	chr9	136706648	136706958	(1687759)	+	AluSx1	SINE/Alu	1	305	(7)	4194698
3741	32.8	3.9	3.7	chr9	136706959	136707635	(1687082)	+	HERVL40-int	LTR/ERVL	1766	2440	(3090)	4194690
2270	8.8	0.3	0.0	chr9	137038325	137038608	(1356109)	+	AluSp	SINE/Alu	1	285	(28)	4195140
47	0.0	0.0	0.0	chr9	137038609	137038651	(1356066)	+	(AAAT)n	Simple_repeat	1	43	(0)	4195141
12	28.7	0.0	0.0	chr9	137233515	137233556	(1161161)	+	G-rich	Low_complexity	1	42	(0)	4195370
3912	18.6	4.8	3.9	chr9	137731600	137732763	(661954)	C	LTR2752	LTR/ERV1	(0)	1263	15	4196090
491	12.8	0.0	1.1	chr9	137948537	137948623	(446094)	C	MER4C	LTR/ERV1	(0)	465	380	4196369
409	13.8	5.7	1.5	chr9	137948648	137949540	(445177)	+	(GT)n	Simple_repeat	1	944	(0)	4196370
899	26.2	1.9	2.0	chrX	953240	954566	(155086329)	+	(CCAT)n	Simple_repeat	1	1330	(0)	4359748
165	29.9	0.4	0.6	chrX	1419907	1420411	(154620484)	+	(TCTC)n	Simple_repeat	1	507	(0)	4360950
612	25.6	1.7	0.0	chrX	2611621	2611792	(153429103)	+	MER45A	DNA/hAT-Tip100	1	175	(3)	4363233
537	32.8	0.6	0.0	chrX	2619043	2619216	(153421679)	+	MER45A	DNA/hAT-Tip100	1	175	(3)	4363246
646	27.7	1.2	1.2	chrX	2622995	2623162	(153417733)	+	MER45A	DNA/hAT-Tip100	8	175	(3)	4363253
15	10.7	3.3	0.0	chrX	2623407	2623436	(153417459)	+	(ACCCAA)n	Simple_repeat	1	31	(0)	4363254
672	23.4	4.0	5.7	chrX	2719956	2720132	(153320763)	+	MER45A	DNA/hAT-Tip100	1	174	(4)	4363436
12	16.8	7.5	0.0	chrX	2720370	2720409	(153320486)	+	A-rich	Low_complexity	1	43	(0)	4363437
1676	17.4	1.0	3.4	chrX	2819138	2819435	(153221460)	+	AluJo	SINE/Alu	1	291	(21)	4363630
316	33.8	6.0	0.0	chrX	2819545	2819701	(153221194)	C	Charlie17	DNA/hAT-Charlie	(2708)	208	42	4363625
259	27.3	0.0	1.5	chrX	3678842	3678908	(152361987)	+	MLT1J	LTR/ERVL-MaLR	116	181	(331)	4365334
1507	19.7	1.8	2.5	chrX	3817038	3817321	(152223574)	C	AluJr	SINE/Alu	(24)	288	7	4365658
406	32.4	1.0	2.9	chrX	6915881	6916055	(149124840)	C	MIRb	SINE/MIR	(17)	191	23	4370963
68	0.0	0.0	0.0	chrX	6916192	6916249	(149124646)	+	(AC)n	Simple_repeat	1	58	(0)	4370964
236	33.0	6.4	0.0	chrX	8888870	8888972	(147151923)	+	MIRb	SINE/MIR	39	148	(120)	4373877
14732	11.4	1.9	6.0	chrX	12147666	12150183	(143890712)	+	Tigger1	DNA/TcMar-Tigger	6	2418	(0)	4379088
13	16.9	0.0	5.4	chrX	12150427	12150463	(143890432)	+	(TCCTT)n	Simple_repeat	1	37	(0)	4379089
1443	32.1	8.5	2.9	chrX	16434714	16435411	(139605484)	+	ERVL-E-int	LTR/ERVL	1713	2453	(3214)	4385999
479	23.8	6.2	0.0	chrX	16435414	16435518	(139605377)	C	L2a	LINE/L2	(0)	3426	3315	4386000
383	29.7	8.0	0.0	chrX	16435541	16435678	(139605217)	+	ERVL-E-int	LTR/ERVL	2495	2644	(3023)	4385999
724	22.4	12.7	0.0	chrX	16435711	16435889	(139605006)	+	MIR	SINE/MIR	20	224	(38)	4386001
259	31.0	0.0	0.0	chrX	18320013	18320083	(137720812)	+	L1ME3A	LINE/L1	5474	5544	(580)	4389269
834	5.5	1.8	0.0	chrX	18320103	18320212	(137720683)	+	MLT1B	LTR/ERVL-MaLR	279	390	(0)	4389270
1465	15.0	4.0	8.3	chrX	18361260	18361573	(137679322)	+	AluJr	SINE/Alu	1	300	(12)	4389349
1169	21.2	7.2	3.9	chrX	18361574	18361761	(137679134)	C	L1ME3	LINE/L1	(125)	6037	5843	4389348
79	1.4	1.3	0.0	chrX	19760010	19760084	(136280811)	+	(TC)n	Simple_repeat	1	76	(0)	4391895
16	0.0	0.0	0.0	chrX	19760086	19760103	(136280792)	+	(AC)n	Simple_repeat	1	18	(0)	4391896
2322	9.7	0.0	0.0	chrX	19760106	19760394	(136280501)	+	AluY	SINE/Alu	1	289	(22)	4391897
858	25.5	3.8	1.8	chrX	20368286	20368568	(135672327)	+	L1ME3G	LINE/L1	6	294	(630)	4393028
910	27.1	8.5	4.3	chrX	20368592	20368777	(135672118)	C	MLT1L	LTR/ERVL-MaLR	(25)	585	392	4393029
1986	18.1	0.3	6.5	chrX	20368778	20369073	(135671822)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	117	4393030
150	11.3	1.9	2.9	chrX	21922980	21923250	(134117645)	+	A-rich	Low_complexity	1	276	(0)	4395170
186	27.7	2.1	0.0	chrX	22363011	22363057	(133677838)	C	MIRc	SINE/MIR	(195)	73	26	4395908
2254	11.0	0.0	0.3	chrX	24143726	24144017	(131896878)	C	AluSx3	SINE/Alu	(20)	291	1	4398936
1623	23.2	14.1	16.4	chrX	24144018	24144155	(131896740)	C	L1MC5	LINE/L1	(227)	2550	2433	4398937
1664	12.5	7.1	1.4	chrX	24144156	24144476	(131896419)	C	AluJb	SINE/Alu	(0)	312	6	4398938
844	30.8	4.0	3.0	chrX	24659158	24659528	(131381367)	C	MamGypsy2-I	LTR/Gypsy	(3455)	711	337	4399938
2532	14.1	3.3	0.5	chrX	24659556	24659940	(131380955)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4399941
19060	14.1	4.6	1.4	chrX	37461988	37465035	(118575860)	C	ERVL-B4-int	LTR/ERVL	(0)	5714	2564	4417434
753	13.9	0.8	0.8	chrX	37465054	37465176	(118575719)	+	LTR56	LTR/ERV1	9	131	(314)	4417435
3214	14.8	0.8	1.0	chrX	37465177	37465680	(118575215)	+	PrimLTR79	LTR/ERV1	1	503	(0)	4417436
48	0.0	0.0	0.0	chrX	40014386	40014426	(116026469)	+	(GT)n	Simple_repeat	1	41	(0)	4421630
16	5.2	0.0	0.0	chrX	40014427	40014446	(116026449)	+	(CG)n	Simple_repeat	1	20	(0)	4421631
2239	11.8	0.0	0.0	chrX	46377262	46377549	(109663346)	C	AluSx3	SINE/Alu	(23)	288	1	4432043
591	13.1	5.7	0.0	chrX	46377552	46377650	(109663245)	C	L1PA7	LINE/L1	(8)	6146	6042	4432044
12	4.3	8.3	0.0	chrX	46377662	46377685	(109663210)	+	(TGTTT)n	Simple_repeat	1	26	(0)	4432045
1103	5.4	1.5	0.0	chrX	46377688	46377817	(109663078)	C	AluYb8	SINE/Alu	(186)	132	1	4432046
723	31.8	4.5	4.2	chrX	50861794	50862102	(105178793)	C	LTR33A	LTR/ERVL	(15)	505	196	4439966
284	28.4	0.0	2.1	chrX	50862112	50862208	(105178687)	+	MLT1K	LTR/ERVL-MaLR	6	100	(495)	4439967
2190	9.6	0.7	0.0	chrX	53330137	53330437	(102710458)	C	AluSp	SINE/Alu	(9)	304	2	4443496
27673	16.2	5.6	4.6	chrX	55744405	55747805	(100293090)	C	ERVL-B4-int	LTR/ERVL	(2159)	3555	35	4447456
27643	7.2	1.0	0.5	chrX	63310273	63313527	(92727368)	C	HERVL-int	LTR/ERVL	(0)	5654	2382	4450038
24084	7.5	0.3	0.3	chrX	63627467	63630720	(92410175)	C	HERVL-int	LTR/ERVL	(0)	5654	2401	4450328
702	8.2	0.0	0.0	chrX	63630736	63630833	(92410062)	C	MLT2A1	LTR/ERVL	(346)	98	1	4450329
35681	9.2	1.5	0.9	chrX	64626630	64631703	(91409192)	+	HERVL-int	LTR/ERVL	1	5104	(550)	4451564
36601	10.0	1.1	0.4	chrX	66481811	66487079	(89553816)	C	HERVL-int	LTR/ERVL	(274)	5380	75	4453751
57	1.7	3.3	0.0	chrX	70931184	70931243	(85109652)	+	(AC)n	Simple_repeat	1	62	(0)	4460428
986	22.1	2.5	0.0	chrX	71893788	71893982	(84146913)	+	ERVL-B4-int	LTR/ERVL	3071	3270	(2444)	4462333
4073	17.7	1.9	1.5	chrX	71893981	71894699	(84146196)	C	ERVL-B4-int	LTR/ERVL	(3099)	2615	1894	4462332
588	27.3	5.5	0.0	chrX	72075602	72075755	(83965140)	+	MIRb	SINE/MIR	54	216	(52)	4462651
39	0.0	2.7	0.0	chrX	72075902	72075938	(83964957)	+	(GT)n	Simple_repeat	1	38	(0)	4462652
2305	10.9	0.3	0.0	chrX	72075940	72076232	(83964663)	C	AluSp	SINE/Alu	(19)	294	1	4462653
303	32.7	8.8	5.9	chrX	72719811	72719977	(83320918)	C	L1ME4a	LINE/L1	(1054)	5092	4921	4463781
53	0.0	0.0	0.0	chrX	72719978	72720025	(83320870)	+	(ATTT)n	Simple_repeat	1	48	(0)	4463790
2534	4.6	0.3	0.0	chrX	72720026	72720308	(83320587)	C	AluYm1	SINE/Alu	(27)	284	1	4463791
36900	10.5	2.1	1.2	chrX	73047477	73050569	(82990326)	C	HERVL-int	LTR/ERVL	(0)	3646	491	4464174
25437	9.2	0.2	0.3	chrX	73166118	73169645	(82871250)	C	HERVL-int	LTR/ERVL	(47)	5607	2083	4464283
3139	31.7	5.7	4.1	chrX	73708058	73710152	(82330743)	C	ERV24B_Prim-int	LTR/ERV1	(3151)	4462	2332	4464672
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
36036	8.3	3.4	4.1	chrX	77124441	77125106	(78915789)	+	HERVL-int	LTR/ERVL	2029	2712	(2942)	4468034
182	33.1	6.6	6.0	chrX	77125107	77125257	(78915638)	C	OldhAT1	DNA/hAT-Ac	(1701)	1147	996	4468036
36036	8.3	3.4	4.1	chrX	77125258	77128115	(78912780)	+	HERVL-int	LTR/ERVL	2713	5653	(1)	4468034
2125	22.5	4.0	0.7	chrX	78991435	78991899	(77048996)	C	ERVL-B4-int	LTR/ERVL	(1569)	4188	3708	4470421
5910	19.8	3.1	1.0	chrX	78991920	78993044	(77047851)	C	ERVL-B4-int	LTR/ERVL	(2951)	2763	1614	4470421
41434	9.3	1.5	0.3	chrX	79849415	79854996	(76185899)	+	HERVL-int	LTR/ERVL	1	5654	(0)	4471227
21165	11.9	2.4	3.1	chrX	83174844	83178270	(72862625)	C	HERVL-int	LTR/ERVL	(2253)	3401	1	4474626
41134	7.8	0.9	0.4	chrX	86306833	86312455	(69728440)	+	HERVL-int	LTR/ERVL	1	5654	(0)	4477950
41961	9.5	0.6	0.3	chrX	93957818	93963456	(62077439)	+	HERVL-int	LTR/ERVL	1	5654	(0)	4486292
34897	16.1	0.4	0.8	chrX	94916154	94921574	(61119321)	+	HERVL-int	LTR/ERVL	1	5419	(235)	4487434
188	30.7	13.0	3.0	chrX	97142229	97142463	(58898432)	C	L2c	LINE/L2	(151)	3236	2975	4490173
35473	7.7	0.7	0.4	chrX	98849835	98854397	(57186498)	C	HERVL-int	LTR/ERVL	(0)	5654	1079	4492525
475	19.8	7.2	0.8	chrX	110132794	110132910	(45907985)	+	MIR	SINE/MIR	111	235	(27)	4507979
2237	15.5	0.3	4.0	chrX	110132924	110133143	(45907752)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	172	4507983
23629	14.8	3.8	0.5	chrX	111983208	111987204	(44053691)	C	ERVL-B4-int	LTR/ERVL	(1475)	4239	105	4510722
24879	6.7	0.5	0.1	chrX	113760831	113763928	(42276967)	+	HERVL-int	LTR/ERVL	1	3110	(2544)	4513159
57	0.0	0.0	0.0	chrX	115881342	115881392	(40159503)	+	(TTTA)n	Simple_repeat	1	51	(0)	4516120
34	27.1	4.1	4.5	chrX	119237287	119237456	(36803439)	+	(GT)n	Simple_repeat	1	177	(0)	4520706
34123	7.7	1.2	0.8	chrX	121449767	121455292	(34585603)	+	HERVL-int	LTR/ERVL	1	5652	(2)	4524437
15373	20.0	1.8	5.5	chrX	121975079	121978279	(34062616)	+	HERVL-int	LTR/ERVL	2	3081	(2676)	4525026
23449	9.2	0.5	0.2	chrX	122609557	122612969	(33427926)	+	HERVL-int	LTR/ERVL	1	3423	(2231)	4525627
26307	9.2	2.0	2.7	chrX	125727957	125730360	(30310535)	C	HERVL-int	LTR/ERVL	(1064)	3292	876	4530416
20385	9.7	0.9	1.9	chrX	127935968	127938359	(28102536)	C	HERVL-int	LTR/ERVL	(2773)	2881	518	4532816
37	5.1	0.0	0.0	chrX	132613380	132613420	(23427475)	+	(GT)n	Simple_repeat	1	41	(0)	4539618
35343	13.5	3.3	3.1	chrX	134093895	134097892	(21943003)	+	ERVL-int	LTR/ERVL	931	4971	(786)	4542075
42903	6.0	1.4	0.4	chrX	139398176	139402644	(16638251)	+	HERVL-int	LTR/ERVL	1184	5654	(0)	4550644
30671	7.8	1.1	1.1	chrX	141885689	141890118	(14150777)	+	HERVL-int	LTR/ERVL	1133	5558	(96)	4554435
43417	7.8	0.7	0.6	chrX	142916440	142922088	(13118807)	+	HERVL-int	LTR/ERVL	2	5654	(0)	4555840
19547	8.9	0.7	0.4	chrX	146312957	146315662	(9725233)	C	HERVL-int	LTR/ERVL	(893)	4761	2050	4560335
89	33.0	2.0	3.9	chrX	149504517	149505021	(6535874)	+	GA-rich	Low_complexity	1	515	(0)	4564707
22895	7.5	0.7	0.9	chrX	149751043	149753893	(6287002)	C	HERVL-int	LTR/ERVL	(2788)	2866	3	4564999
3557	19.0	6.8	2.4	chrX	150029642	150030834	(6010061)	+	L1ME1	LINE/L1	4638	5898	(281)	4565323
1960	11.3	1.8	1.4	chrX	153936915	153937197	(2103698)	+	AluJr	SINE/Alu	1	284	(28)	4570968
52	0.0	0.0	0.0	chrX	153937198	153937244	(2103651)	+	(AAAT)n	Simple_repeat	1	47	(0)	4570969
320	12.2	0.5	0.5	chrX	156008859	156009450	(31445)	+	(GT)n	Simple_repeat	1	595	(0)	4574064