19	13.0	0.0	6.2	chr1	959305	959352	(247997070)	+	(CCGCC)n	Simple_repeat	1	48	(0)	1202
13	16.7	4.8	2.3	chr1	1000441	1000482	(247955940)	+	G-rich	Low_complexity	1	44	(0)	1255
1159	22.5	6.1	7.5	chr1	1106022	1106603	(247849819)	+	L1ME2	LINE/L1	5535	5898	(458)	1367
9434	10.3	11.6	2.6	chr1	1106614	1108045	(247848377)	+	LTR12C	LTR/ERV1	2	1579	(0)	1368
13	18.8	4.5	2.2	chr1	1116008	1116051	(247840371)	+	(CCCCAGC)n	Simple_repeat	1	46	(0)	1381
15	15.5	7.0	0.0	chr1	1116237	1116279	(247840143)	+	G-rich	Low_complexity	1	46	(0)	1382
16	16.7	2.4	2.3	chr1	1116461	1116502	(247839920)	+	(AGGCGG)n	Simple_repeat	1	43	(0)	1383
17	13.0	2.9	0.0	chr1	1273795	1273828	(247682594)	+	(CCG)n	Simple_repeat	1	35	(0)	1543
19	23.5	1.8	1.7	chr1	1333607	1333663	(247622759)	+	(GCT)n	Simple_repeat	1	58	(0)	1598
15	26.6	2.2	6.5	chr1	1333720	1333810	(247622612)	+	(CCTGG)n	Simple_repeat	1	93	(0)	1599
14	18.7	0.0	6.2	chr1	1335054	1335101	(247621321)	+	(CCAGCA)n	Simple_repeat	1	48	(0)	1600
24	23.2	0.0	1.6	chr1	1399243	1399304	(247557118)	+	(CGC)n	Simple_repeat	1	62	(0)	1683
17	23.1	1.3	7.7	chr1	1574632	1574708	(247381714)	+	(GGC)n	Simple_repeat	1	78	(0)	1975
1962	13.1	2.0	0.3	chr1	1954502	1954791	(247001631)	+	AluJb	SINE/Alu	1	295	(17)	2663
12	25.0	0.0	4.3	chr1	2019496	2019542	(246936880)	+	G-rich	Low_complexity	1	47	(0)	2779
34	11.8	10.6	1.0	chr1	2526358	2526451	(246429971)	+	(GCCCGCC)n	Simple_repeat	1	104	(0)	3281
15	14.9	2.6	2.5	chr1	3502203	3502241	(245454181)	+	G-rich	Low_complexity	1	40	(0)	4063
234	29.8	21.6	0.0	chr1	3695747	3695974	(245260448)	C	L2b	LINE/L2	(599)	2820	2530	4240
322	24.8	3.1	1.4	chr1	6161946	6162055	(242794367)	+	MIRc	SINE/MIR	39	151	(117)	7757
12	13.8	11.9	3.0	chr1	6199328	6199386	(242757036)	+	G-rich	Low_complexity	1	66	(0)	7812
59	17.4	2.7	3.3	chr1	6244934	6245081	(242711341)	+	(CCCTC)n	Simple_repeat	1	152	(0)	7899
18	18.6	0.0	7.1	chr1	6613790	6613845	(242342577)	+	(CCG)n	Simple_repeat	1	56	(0)	8544
11	21.3	4.4	2.1	chr1	6784676	6784720	(242171702)	+	(GCCGGC)n	Simple_repeat	1	47	(0)	8925
336	29.7	0.2	0.4	chr1	7492549	7493514	(241462908)	+	(ACAC)n	Simple_repeat	1	968	(0)	9910
17	11.2	0.0	0.0	chr1	8026302	8026330	(240930092)	+	(CCG)n	Simple_repeat	1	29	(0)	10774
495	19.4	4.4	0.9	chr1	8297437	8297545	(240658877)	C	MLT1J2	LTR/ERVL-MaLR	(302)	146	34	11414
2048	14.5	0.3	1.3	chr1	8297660	8297963	(240658459)	C	AluJb	SINE/Alu	(11)	301	1	11415
15	21.8	0.0	5.7	chr1	8878056	8878108	(240078314)	+	(GCGCGG)n	Simple_repeat	1	53	(0)	12446
15	8.2	12.7	3.2	chr1	8879289	8879343	(240077079)	+	(CGCCTG)n	Simple_repeat	1	62	(0)	12447
2093	14.5	0.7	0.3	chr1	9009454	9009757	(239946665)	C	AluJb	SINE/Alu	(7)	305	1	12743
468	31.2	6.1	1.6	chr1	9009825	9010013	(239946409)	+	MER20B	DNA/hAT-Charlie	542	739	(44)	12744
2158	11.3	0.0	0.0	chr1	10768234	10768517	(238187905)	C	AluSz	SINE/Alu	(28)	284	1	16316
2375	9.3	0.3	0.0	chr1	10768860	10769160	(238187262)	+	AluSz	SINE/Alu	2	303	(9)	16317
322	34.1	10.6	5.3	chr1	11013213	11013515	(237942907)	+	L2c	LINE/L2	3066	3386	(1)	16859
460	27.3	0.0	0.0	chr1	11590404	11590513	(237365909)	C	L2b	LINE/L2	(1)	3374	3265	18007
695	33.4	8.7	0.9	chr1	11590548	11590885	(237365537)	+	MLT1J2	LTR/ERVL-MaLR	33	399	(49)	18008
1687	23.4	15.2	2.8	chr1	11590915	11590953	(237365469)	+	MLT1G1	LTR/ERVL-MaLR	1	41	(538)	18009
2310	12.2	0.0	0.0	chr1	11590954	11591264	(237365158)	+	AluSz	SINE/Alu	1	311	(1)	18010
810	8.7	0.0	4.2	chr1	11908152	11908271	(237048151)	+	U5	snRNA	1	115	(1)	18706
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
381	19.6	16.0	0.4	chr1	11908990	11909143	(237047279)	C	MLT1J	LTR/ERVL-MaLR	(345)	167	1	18708
2515	5.6	0.0	3.4	chr1	11909187	11909506	(237046916)	+	AluSx	SINE/Alu	1	309	(3)	18709
768	7.9	0.0	5.0	chr1	11909807	11909926	(237046496)	C	U5	snRNA	(1)	115	2	18711
12	13.7	6.8	4.3	chr1	12166722	12166765	(236789657)	+	(GCAGG)n	Simple_repeat	1	47	(0)	19302
249	31.9	5.0	2.1	chr1	13872179	13872274	(235084148)	C	L2c	LINE/L2	(8)	3367	3269	22166
239	22.0	0.0	2.0	chr1	13872308	13872358	(235084064)	C	MLT1N2	LTR/ERVL-MaLR	(8)	554	505	22167
367	31.7	12.8	1.0	chr1	14435349	14435644	(234520778)	+	LTR16C	LTR/ERVL	138	473	(16)	23165
219	21.2	13.2	0.0	chr1	14435687	14435752	(234520670)	+	MIR	SINE/MIR	86	161	(101)	23166
431	26.2	9.0	0.0	chr1	14961973	14962113	(233994309)	C	MLT1J	LTR/ERVL-MaLR	(350)	162	8	24254
1420	24.2	8.1	0.7	chr1	15171284	15171781	(233784641)	C	LTR33C	LTR/ERVL	(9)	620	1	24696
15	29.2	0.0	3.4	chr1	15617497	15617555	(233338867)	+	G-rich	Low_complexity	1	59	(0)	25685
16	10.4	3.2	0.0	chr1	15617534	15617564	(233338858)	+	(GAGC)n	Simple_repeat	1	32	(0)	25686
21	13.9	0.0	2.3	chr1	15617628	15617670	(233338752)	+	G-rich	Low_complexity	1	43	(0)	25687
44	32.8	0.0	0.0	chr1	16111915	16112057	(232844365)	+	(CA)n	Simple_repeat	1	143	(0)	26714
235	26.8	16.7	0.4	chr1	16112391	16112521	(232843901)	+	MIR1_Amn	SINE/MIR	29	181	(87)	26715
2173	12.5	1.3	0.3	chr1	16231048	16231351	(232725071)	+	AluSx1	SINE/Alu	1	307	(5)	26987
730	28.0	7.5	1.9	chr1	16231378	16231752	(232724670)	+	MLT1J1	LTR/ERVL-MaLR	47	444	(0)	26988
12	23.1	3.7	3.6	chr1	16613393	16613446	(232342976)	+	(CCGCGCC)n	Simple_repeat	1	56	(0)	27819
16	7.0	3.1	3.0	chr1	16613537	16613568	(232342854)	+	(CCTGCG)n	Simple_repeat	1	33	(0)	27820
1541	0.0	0.0	0.0	chr1	16895980	16896143	(232060279)	+	U1	snRNA	1	164	(1)	28204
424	26.2	6.4	3.7	chr1	17012090	17012262	(231944160)	+	MIRb	SINE/MIR	25	207	(61)	28482
381	26.0	11.7	9.5	chr1	17053579	17053778	(231902644)	+	MIRc	SINE/MIR	2	206	(62)	28580
1046	29.6	7.2	3.4	chr1	17161144	17161559	(231794863)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	80	28827
573	27.5	5.2	4.3	chr1	17161558	17161766	(231794656)	+	LTR16	LTR/ERVL	225	435	(3)	28828
1322	23.1	0.8	0.0	chr1	17944540	17944795	(231011627)	C	ERVL-E-int	LTR/ERVL	(4437)	1230	973	30584
277	14.9	2.1	0.0	chr1	17944818	17944864	(231011558)	C	MLT2E	LTR/ERVL	(548)	80	33	30585
680	13.6	0.0	0.0	chr1	17945105	17945192	(231011230)	+	AluJr	SINE/Alu	6	93	(219)	30586
18	0.0	7.1	0.0	chr1	17945193	17945220	(231011202)	+	(TAA)n	Simple_repeat	1	30	(0)	30587
392	35.5	2.6	1.4	chr1	17976783	17976920	(230979502)	+	MIR	SINE/MIR	24	162	(46)	30662
834	27.9	11.0	1.7	chr1	17976921	17977266	(230979156)	+	MLT1J	LTR/ERVL-MaLR	19	400	(112)	30663
701	33.7	4.7	6.2	chr1	18297896	18298160	(230658262)	C	L2a	LINE/L2	(210)	3216	2961	31341
272	20.6	1.4	5.6	chr1	18298314	18298385	(230658037)	C	MER39	LTR/ERV1	(634)	73	5	31343
1522	25.2	5.1	3.1	chr1	18319008	18319465	(230636957)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	43	31390
666	31.0	6.4	5.2	chr1	18452457	18452844	(230503578)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	19	31681
619	29.9	2.2	12.8	chr1	18592302	18592486	(230363936)	C	L1ME3B	LINE/L1	(735)	5709	5544	31993
531	34.6	6.5	6.2	chr1	18592488	18592919	(230363503)	+	MLT1J2	LTR/ERVL-MaLR	16	448	(0)	32000
195	29.0	1.6	0.0	chr1	18689778	18689839	(230266583)	+	L2c	LINE/L2	3034	3096	(291)	32196
20	24.4	0.0	4.4	chr1	19210179	19210246	(229746176)	+	(CCG)n	Simple_repeat	1	68	(0)	33227
648	26.2	12.3	1.7	chr1	19676155	19676387	(229280035)	C	MIRb	SINE/MIR	(3)	265	5	34191
3528	7.8	1.3	0.0	chr1	19938150	19938613	(229017809)	C	L1PA13	LINE/L1	(4)	6159	5690	34798
1283	26.5	5.4	8.6	chr1	19938614	19938793	(229017629)	C	MLT1J1	LTR/ERVL-MaLR	(284)	228	43	34797
300	30.3	11.1	3.5	chr1	19938852	19939027	(229017395)	+	L2c	LINE/L2	3222	3425	(1)	34799
1130	23.1	1.6	0.0	chr1	20089348	20089598	(228866824)	C	MLT1J2	LTR/ERVL-MaLR	(155)	293	39	35055
12	22.5	2.3	2.3	chr1	20343348	20343390	(228613032)	+	(CGCGAG)n	Simple_repeat	1	44	(0)	35571
653	23.9	7.2	3.0	chr1	20440681	20441014	(228515408)	C	MLT1J	LTR/ERVL-MaLR	(41)	471	63	35786
723	30.6	3.8	4.3	chr1	20603227	20603714	(228352708)	C	MLT1A	LTR/ERVL-MaLR	(0)	448	1	36151
24	21.6	1.2	4.8	chr1	20717769	20717850	(228238572)	+	G-rich	Low_complexity	1	83	(0)	36420
3211	22.0	8.8	1.9	chr1	21490542	21491480	(227464942)	+	LTR28C	LTR/ERV1	1	1659	(96)	38003
345	24.2	22.4	0.0	chr1	21607329	21607477	(227348945)	C	MIR	SINE/MIR	(67)	195	4	38280
1940	8.0	11.8	0.0	chr1	21658942	21659204	(227297218)	C	AluSp	SINE/Alu	(15)	298	1	38409
1521	22.6	11.8	1.0	chr1	22203221	22203614	(226752808)	C	MLT1J2	LTR/ERVL-MaLR	(4)	444	3	39627
607	29.4	12.6	7.7	chr1	22203615	22203868	(226752554)	C	L2c	LINE/L2	(155)	3232	2937	39626
840	24.8	3.4	6.1	chr1	22428700	22428944	(226527478)	+	MLT1J	LTR/ERVL-MaLR	26	263	(249)	40156
1985	8.3	0.0	4.0	chr1	22451392	22451668	(226504754)	+	AluSq	SINE/Alu	40	305	(8)	40206
14	4.0	3.6	3.5	chr1	22673605	22673632	(226282790)	+	(CTCTC)n	Simple_repeat	1	29	(0)	40649
307	36.8	10.3	0.6	chr1	22673928	22674110	(226282312)	+	MamSINE1	SINE/tRNA-RTE	12	214	(76)	40650
309	24.0	13.8	2.9	chr1	23019090	23019192	(225937230)	+	L2c	LINE/L2	3272	3387	(0)	41474
14	26.9	1.4	5.3	chr1	23019449	23019522	(225936900)	+	(GCGCGGC)n	Simple_repeat	1	75	(0)	41475
19	24.5	0.0	1.8	chr1	23019614	23019668	(225936754)	+	(GGC)n	Simple_repeat	1	55	(0)	41476
21	7.7	0.0	0.0	chr1	23531239	23531266	(225425156)	+	(T)n	Simple_repeat	1	28	(0)	42654
16	5.2	0.0	0.0	chr1	23531348	23531367	(225425055)	+	(C)n	Simple_repeat	1	20	(0)	42655
13	15.2	2.5	4.9	chr1	23743733	23743772	(225212650)	+	G-rich	Low_complexity	1	41	(0)	43265
186	36.8	2.9	0.0	chr1	23825554	23825621	(225130801)	C	L2b	LINE/L2	(24)	3351	3282	43449
597	24.1	1.4	18.8	chr1	24248688	24248948	(224707474)	+	MER58C	DNA/hAT-Charlie	1	215	(0)	44483
855	24.4	15.3	9.8	chr1	24248949	24249112	(224707310)	C	MLT1J1	LTR/ERVL-MaLR	(251)	193	18	44478
313	26.4	11.1	0.0	chr1	24321541	24321673	(224634749)	+	MIRb	SINE/MIR	11	174	(94)	44654
2457	7.5	0.3	1.3	chr1	24910004	24910309	(224046113)	+	AluSx1	SINE/Alu	1	303	(9)	45977
338	37.7	10.1	3.7	chr1	24910545	24910869	(224045553)	+	L3	LINE/CR1	2700	3047	(1052)	45978
2070	20.9	6.3	1.0	chr1	25715800	25716282	(223240140)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	1	47697
1628	17.7	7.1	1.1	chr1	25716338	25716614	(223239808)	C	AluJb	SINE/Alu	(17)	295	1	47698
218	29.2	11.1	1.0	chr1	25820184	25820280	(223136142)	C	MIR1_Amn	SINE/MIR	(94)	136	29	47892
446	35.1	6.7	3.3	chr1	26007039	26007312	(222949110)	+	L2c	LINE/L2	3084	3367	(20)	48327
19	22.9	3.6	0.0	chr1	26161955	26162010	(222794412)	+	(GGC)n	Simple_repeat	1	58	(0)	48719
15	20.0	2.5	0.0	chr1	26170107	26170146	(222786276)	+	(CGACCC)n	Simple_repeat	1	41	(0)	48734
415	26.3	8.8	6.0	chr1	26234551	26234817	(222721605)	C	L2b	LINE/L2	(35)	3340	3068	48879
976	19.9	3.7	0.0	chr1	26234834	26235039	(222721383)	+	MER20	DNA/hAT-Charlie	1	214	(5)	48880
16	13.2	0.0	0.0	chr1	26306820	26306844	(222649578)	+	(G)n	Simple_repeat	1	25	(0)	49024
951	18.4	2.6	1.1	chr1	26386145	26386331	(222570091)	+	LTR67B	LTR/ERVL	2	191	(429)	49217
12	12.6	0.0	3.6	chr1	26695918	26695945	(222260477)	+	(CCGC)n	Simple_repeat	1	28	(0)	50001
35	1.7	6.2	4.3	chr1	26695951	26696015	(222260407)	+	(CCCT)n	Simple_repeat	1	69	(0)	50002
12	11.3	6.9	0.0	chr1	27012628	27012656	(221943766)	+	(CCGCT)n	Simple_repeat	1	31	(0)	50691
2300	11.5	0.3	0.0	chr1	27041608	27041911	(221914511)	C	AluSx1	SINE/Alu	(7)	305	1	50775
225	26.7	12.1	2.4	chr1	27041961	27042095	(221914327)	+	MIR1_Amn	SINE/MIR	93	248	(20)	50776
21	18.0	0.0	0.0	chr1	27042209	27042252	(221914170)	+	(GTGAGT)n	Simple_repeat	1	44	(0)	50777
1002	25.5	3.3	7.1	chr1	27042271	27042302	(221914120)	+	MamRep4096	DNA/hAT-Tip100	6	32	(394)	50778
2260	10.7	0.3	0.7	chr1	27042303	27042612	(221913810)	+	AluSq2	SINE/Alu	1	309	(4)	50779
15	27.5	6.7	0.0	chr1	27155046	27155120	(221801302)	+	(GCTCCA)n	Simple_repeat	1	80	(0)	51051
384	20.8	12.2	5.6	chr1	27350194	27350300	(221606122)	+	MIRb	SINE/MIR	119	233	(35)	51563
12	32.9	0.0	4.1	chr1	27360882	27360954	(221595468)	+	(CCCCTC)n	Simple_repeat	1	73	(0)	51575
19	22.0	6.9	4.8	chr1	27604061	27604176	(221352246)	+	(CCTCGC)n	Simple_repeat	1	124	(0)	52104
12	25.3	0.0	2.5	chr1	27604230	27604269	(221352153)	+	G-rich	Low_complexity	1	40	(0)	52105
248	35.6	4.9	5.4	chr1	27915036	27915240	(221041182)	C	L3	LINE/CR1	(198)	3901	3698	52826
1790	15.1	0.0	0.3	chr1	28505413	28505711	(220450711)	C	AluSz6	SINE/Alu	(13)	299	2	54373
1954	11.4	4.5	0.0	chr1	28506188	28506484	(220449938)	C	AluSx	SINE/Alu	(1)	311	1	54374
17	7.3	3.0	5.9	chr1	28812783	28812815	(220143607)	+	(TG)n	Simple_repeat	1	34	(0)	55209
436	26.5	16.4	0.0	chr1	29197784	29197900	(219758522)	C	MIRb	SINE/MIR	(8)	260	121	56135
211	21.2	18.4	0.0	chr1	29258324	29258403	(219698019)	C	MIR3	SINE/MIR	(79)	129	32	56268
288	29.1	12.6	5.7	chr1	29287290	29287466	(219668956)	+	L2b	LINE/L2	3189	3377	(49)	56327
301	31.1	10.9	2.2	chr1	30006064	30006422	(218950000)	+	MLT1I	LTR/ERVL-MaLR	36	422	(22)	57660
435	27.9	12.5	0.0	chr1	30118922	30119068	(218837354)	+	MIRb	SINE/MIR	73	240	(28)	57879
266	33.8	6.0	1.4	chr1	30119085	30119228	(218837194)	C	MIRc	SINE/MIR	(106)	162	12	57880
693	23.8	1.1	6.6	chr1	30135841	30136038	(218820384)	C	MLT1J1	LTR/ERVL-MaLR	(250)	194	8	57915
306	28.9	2.4	4.5	chr1	30136049	30136162	(218820260)	C	MIR1_Amn	SINE/MIR	(111)	119	3	57916
1041	27.3	15.3	1.1	chr1	30853998	30854434	(218101988)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	1	59229
356	35.1	9.5	4.7	chr1	30854460	30854539	(218101883)	+	L2b	LINE/L2	3038	3117	(258)	59228
251	26.0	8.6	0.9	chr1	30930505	30930647	(218025775)	C	MIRb	SINE/MIR	(50)	180	19	59419
15	14.6	6.1	3.9	chr1	31772036	31772084	(217184338)	+	(GGC)n	Simple_repeat	1	52	(0)	61285
18	30.6	3.1	0.0	chr1	31772147	31772211	(217184211)	+	(TG)n	Simple_repeat	1	67	(0)	61286
15	14.7	0.0	0.0	chr1	31938446	31938475	(217017947)	+	(GCTG)n	Simple_repeat	1	30	(0)	61653
15	26.8	6.8	1.3	chr1	32179895	32179967	(216776455)	+	(GC)n	Simple_repeat	1	78	(0)	62270
19	15.5	3.7	3.6	chr1	32336172	32336255	(216620167)	+	(CTCCG)n	Simple_repeat	1	84	(0)	62647
18	16.6	2.0	3.9	chr1	32361673	32361723	(216594699)	+	G-rich	Low_complexity	1	52	(0)	62708
190	26.7	8.2	5.3	chr1	32716478	32716572	(216239850)	C	MIR3	SINE/MIR	(78)	130	33	63568
12	15.7	2.6	5.0	chr1	33036893	33036931	(215919491)	+	(ACGC)n	Simple_repeat	1	40	(0)	64297
654	23.7	9.4	7.8	chr1	33037181	33037469	(215918953)	+	L1M5	LINE/L1	5514	5802	(360)	64298
320	26.1	3.2	1.1	chr1	33237555	33237647	(215718775)	C	MIRb	SINE/MIR	(0)	268	174	64738
693	17.9	3.6	0.0	chr1	33237662	33237795	(215718627)	+	MLT1J1	LTR/ERVL-MaLR	3	141	(303)	64739
329	19.4	1.0	16.9	chr1	33237917	33238034	(215718388)	+	MER58B	DNA/hAT-Charlie	231	329	(12)	64740
679	28.4	4.2	10.2	chr1	33251930	33252070	(215704352)	+	MLT1I	LTR/ERVL-MaLR	63	190	(221)	64782
2158	7.8	0.7	1.0	chr1	33252071	33252354	(215704068)	+	AluSp	SINE/Alu	1	285	(28)	64783
879	23.6	14.8	5.9	chr1	34711379	34711770	(214244652)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	16	67271
344	26.7	3.2	0.0	chr1	34859978	34860067	(214096355)	C	L2c	LINE/L2	(5)	3382	3290	67556
13	14.1	4.7	4.4	chr1	34985166	34985208	(213971214)	+	(CCGCT)n	Simple_repeat	1	45	(0)	67785
1176	11.3	0.0	0.0	chr1	35032118	35032310	(213924112)	C	AluSx	SINE/Alu	(0)	312	133	67887
379	33.1	2.5	1.9	chr1	35079020	35079179	(213877243)	C	MIR	SINE/MIR	(87)	175	15	67987
12	27.6	0.0	0.0	chr1	35192280	35192318	(213764104)	+	(TGG)n	Simple_repeat	1	39	(0)	68202
39	32.2	0.0	0.0	chr1	35192740	35192869	(213763553)	+	(GCG)n	Simple_repeat	1	130	(0)	68203
17	27.0	2.9	1.4	chr1	35192969	35193037	(213763385)	+	(CCGCCA)n	Simple_repeat	1	70	(0)	68204
43	4.5	0.0	0.0	chr1	35661187	35661232	(213295190)	+	(TG)n	Simple_repeat	1	46	(0)	69172
2056	11.8	1.0	2.0	chr1	35661234	35661537	(213294885)	C	AluJr	SINE/Alu	(9)	303	3	69173
12	20.1	1.9	7.4	chr1	36178832	36178884	(212777538)	+	(GGCG)n	Simple_repeat	1	54	(0)	70292
14	22.6	2.4	0.0	chr1	36385664	36385705	(212570717)	+	(CCCGCTC)n	Simple_repeat	1	43	(0)	70747
12	26.2	4.0	0.0	chr1	36385706	36385713	(212570709)	+	(CCCGCAC)n	Simple_repeat	1	52	(0)	70748
465	27.5	16.3	0.9	chr1	36398030	36398345	(212558077)	C	L2a	LINE/L2	(1)	3425	3052	70782
7043	15.9	6.1	3.6	chr1	36400551	36401780	(212554642)	C	LTR2752	LTR/ERV1	(0)	1263	1	70791
254	33.6	0.0	5.5	chr1	37113292	37113369	(211843053)	C	MamRep605	LTR?	(117)	732	661	72135
1255	26.0	7.9	5.6	chr1	37113370	37113801	(211842621)	+	MLT1J2	LTR/ERVL-MaLR	1	443	(5)	72136
918	30.6	6.7	4.6	chr1	37158959	37159414	(211797008)	C	MLT1N2	LTR/ERVL-MaLR	(35)	527	62	72231
35	7.0	0.0	0.0	chr1	37255872	37255917	(211700505)	+	(TGT)n	Simple_repeat	1	46	(0)	72360
2170	9.4	2.0	0.0	chr1	37554443	37554739	(211401683)	+	AluSz6	SINE/Alu	1	303	(9)	72993
983	33.3	12.8	4.2	chr1	37621966	37622370	(211334052)	C	L2a	LINE/L2	(1080)	2339	1879	73092
852	15.6	8.4	0.0	chr1	37622382	37622522	(211333900)	+	AluJr	SINE/Alu	141	294	(18)	73103
11	14.9	4.9	4.7	chr1	37764624	37764664	(211191758)	+	(CTCCAC)n	Simple_repeat	1	43	(0)	73397
233	37.5	2.3	1.6	chr1	37807476	37807662	(211148760)	+	L2b	LINE/L2	3218	3411	(15)	73486
211	28.4	5.9	2.1	chr1	37807629	37807725	(211148697)	+	MIR1_Amn	SINE/MIR	35	135	(95)	73487
12	11.8	2.3	8.9	chr1	37808027	37808070	(211148352)	+	G-rich	Low_complexity	1	45	(0)	73488
330	27.6	4.1	4.1	chr1	37865516	37865685	(211090737)	C	L2	LINE/L2	(814)	2605	2436	73604
14	16.4	2.9	0.0	chr1	37946923	37946956	(211009466)	+	(CCTGC)n	Simple_repeat	1	35	(0)	73787
13	22.0	4.8	0.0	chr1	38046030	38046071	(210910351)	+	(GCC)n	Simple_repeat	1	44	(0)	73970
513	29.2	7.6	1.4	chr1	38489808	38490029	(210466393)	C	LTR79	LTR/ERVL	(30)	497	261	74751
330	32.2	0.7	4.4	chr1	38490239	38490397	(210466025)	C	LTR85b	LTR/Gypsy?	(252)	532	380	74752
1900	11.3	8.0	0.0	chr1	38755956	38756221	(210200201)	C	AluSz	SINE/Alu	(19)	293	5	75266
850	21.8	8.2	8.2	chr1	38756222	38756320	(210200102)	+	LTR16C	LTR/ERVL	357	450	(39)	75264
866	18.1	0.0	0.0	chr1	38756324	38756467	(210199955)	+	MLT2F	LTR/ERVL	3	146	(517)	75267
1282	23.1	7.1	5.3	chr1	38756499	38756859	(210199563)	+	MLT2F	LTR/ERVL	260	627	(36)	75267
184	32.6	4.0	2.1	chr1	38818454	38818550	(210137872)	+	MIRb	SINE/MIR	86	184	(84)	75385
801	25.2	7.2	1.1	chr1	40383012	40383454	(208572968)	C	LTR33A	LTR/ERVL	(0)	520	12	78711
18	17.0	1.7	6.6	chr1	40783671	40783730	(208172692)	+	(CGCT)n	Simple_repeat	1	61	(0)	79495
19	12.1	0.0	2.6	chr1	40783743	40783785	(208172637)	+	(GGCGG)n	Simple_repeat	1	41	(0)	79496
669	24.9	13.5	1.8	chr1	41340866	41341094	(207615328)	+	MIR	SINE/MIR	3	262	(0)	80615
327	8.9	0.0	0.0	chr1	41341191	41341235	(207615187)	C	MLT2F	LTR/ERVL	(0)	563	519	80616
533	10.8	1.2	0.0	chr1	41341234	41341316	(207615106)	C	MLT2F	LTR/ERVL	(579)	84	1	80616
351	26.7	14.9	0.8	chr1	41341318	41341449	(207614973)	+	MIRb	SINE/MIR	103	256	(12)	80617
255	34.3	1.0	1.0	chr1	41341462	41341561	(207614861)	C	MIRb	SINE/MIR	(164)	104	5	80614
812	20.5	9.3	6.2	chr1	41925638	41925680	(207030742)	+	MER58C	DNA/hAT-Charlie	174	215	(0)	81684
1092	24.8	15.4	0.9	chr1	41925777	41926114	(207030308)	+	MLT1J	LTR/ERVL-MaLR	9	404	(108)	81686
17	10.1	3.1	0.0	chr1	42958185	42958216	(205998206)	+	(GCCGGG)n	Simple_repeat	1	33	(0)	83430
503	29.4	9.3	0.8	chr1	42963300	42963546	(205992876)	+	L2b	LINE/L2	2363	2632	(787)	83439
13	12.8	6.7	7.8	chr1	43625438	43625456	(205330966)	+	(CCT)n	Simple_repeat	5	64	(0)	84574
387	33.7	9.6	3.5	chr1	43625788	43625883	(205330539)	+	L2c	LINE/L2	2910	3012	(375)	84575
2326	9.6	1.0	0.3	chr1	43625884	43626185	(205330237)	C	AluSx	SINE/Alu	(8)	304	1	84576
788	26.7	6.0	0.9	chr1	43650656	43650878	(205305544)	C	MIRb	SINE/MIR	(8)	260	26	84649
13	24.9	0.0	0.0	chr1	43946812	43946849	(205009573)	+	(GCCGG)n	Simple_repeat	1	38	(0)	85206
1789	16.5	3.7	0.0	chr1	43969380	43969664	(204986758)	+	AluJb	SINE/Alu	2	297	(15)	85228
12	27.1	2.3	0.0	chr1	43974948	43974991	(204981431)	+	(GGAC)n	Simple_repeat	1	45	(0)	85234
13	13.5	0.0	7.9	chr1	43975003	43975040	(204981382)	+	(CCG)n	Simple_repeat	1	38	(0)	85235
30	21.0	0.0	0.0	chr1	44405166	44405226	(204551196)	+	(TG)n	Simple_repeat	1	61	(0)	85972
29	19.0	0.0	3.0	chr1	44405366	44405438	(204550984)	+	(GCC)n	Simple_repeat	1	70	(0)	85973
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
837	16.1	0.0	0.8	chr1	44722273	44722402	(204234020)	+	FLAM_C	SINE/Alu	3	131	(12)	86567
694	14.2	0.8	2.2	chr1	44739339	44739472	(204216950)	C	FLAM_C	SINE/Alu	(11)	132	1	86610
295	29.7	0.2	0.2	chr1	44739481	44739574	(204216848)	C	MIRb	SINE/MIR	(161)	107	8	86611
715	30.4	11.3	2.7	chr1	44774894	44775336	(204181086)	+	L2	LINE/L2	2258	2743	(676)	86676
24	15.2	0.0	3.6	chr1	44775763	44775817	(204180605)	+	G-rich	Low_complexity	1	55	(0)	86689
12	19.3	0.0	5.1	chr1	44784486	44784524	(204171898)	+	(GCGG)n	Simple_repeat	1	39	(0)	86706
13	15.5	0.0	3.2	chr1	44813962	44813992	(204142430)	+	G-rich	Low_complexity	1	31	(0)	86752
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
256	36.5	5.5	6.3	chr1	44820495	44820716	(204135706)	C	L2c	LINE/L2	(238)	3149	2930	86773
296	29.8	16.8	4.0	chr1	46037597	46037823	(202918599)	C	L2b	LINE/L2	(542)	2877	2616	89205
19	13.9	2.3	2.3	chr1	46133199	46133241	(202823181)	+	A-rich	Low_complexity	1	44	(0)	89405
294	31.4	12.4	5.5	chr1	46340413	46340614	(202615808)	+	L2b	LINE/L2	3009	3226	(149)	89844
320	25.3	4.2	8.2	chr1	46466282	46466420	(202490002)	+	MIRb	SINE/MIR	108	240	(22)	90100
19	22.3	1.5	4.3	chr1	46466497	46466564	(202489858)	+	(CCCGC)n	Simple_repeat	1	69	(0)	90102
17	10.8	0.0	3.1	chr1	46466712	46466759	(202489663)	+	(GCG)n	Simple_repeat	1	46	(0)	90103
13	17.1	2.3	4.5	chr1	46668451	46668493	(202287929)	+	G-rich	Low_complexity	1	44	(0)	90459
352	20.7	4.4	4.4	chr1	46668806	46668896	(202287526)	C	MIRb	SINE/MIR	(92)	176	86	90460
16	24.5	0.0	0.0	chr1	46718973	46719016	(202237406)	+	(CTCCGG)n	Simple_repeat	1	44	(0)	90530
20	14.9	0.0	0.0	chr1	46719037	46719073	(202237349)	+	(GGC)n	Simple_repeat	1	37	(0)	90531
1045	30.2	6.9	5.8	chr1	48216433	48217144	(200739278)	C	LTR78	LTR/ERV1	(136)	1168	448	93028
19	14.1	0.0	2.4	chr1	52552993	52553033	(196403389)	+	(CCGCCG)n	Simple_repeat	1	41	(0)	101091
38	25.3	0.8	2.5	chr1	52553102	52553219	(196403203)	+	G-rich	Low_complexity	1	119	(0)	101092
184	36.2	10.2	0.6	chr1	52632756	52632933	(196323489)	+	MIRb	SINE/MIR	2	198	(70)	101303
315	29.2	5.0	2.5	chr1	54199791	54199971	(194756451)	C	MIRb	SINE/MIR	(77)	191	13	104652
317	28.0	3.2	2.5	chr1	54200601	54200755	(194755667)	+	MIRb	SINE/MIR	30	193	(75)	104653
212	25.7	16.9	0.9	chr1	54996075	54996223	(193960199)	+	L2b	LINE/L2	3015	3191	(196)	106314
22	11.9	0.0	0.0	chr1	55039870	55039906	(193916516)	+	(GCT)n	Simple_repeat	1	37	(0)	106404
189	24.2	5.7	0.0	chr1	55040106	55040171	(193916251)	+	MIR3	SINE/MIR	109	178	(30)	106405
516	27.7	12.1	6.4	chr1	55155601	55156067	(193800355)	+	LTR33A	LTR/ERVL	17	520	(0)	106547
19	16.7	3.4	4.9	chr1	56645326	56645384	(192311038)	+	(GGC)n	Simple_repeat	1	61	(0)	109245
18	26.9	1.4	2.8	chr1	56645567	56645637	(192310785)	+	G-rich	Low_complexity	1	72	(0)	109246
248	29.3	5.4	3.1	chr1	56645692	56645853	(192310569)	+	MIR3	SINE/MIR	22	187	(21)	109247
409	14.9	11.3	5.0	chr1	57966916	57967014	(190989408)	+	L1MB1	LINE/L1	6062	6167	(1)	111891
19	10.4	0.0	0.0	chr1	58577094	58577124	(190379298)	+	(CAG)n	Simple_repeat	1	31	(0)	113109
834	26.4	13.2	5.6	chr1	58767249	58767625	(190188797)	+	MLT1J	LTR/ERVL-MaLR	99	508	(4)	113483
19	32.5	0.0	0.0	chr1	58782402	58782467	(190173955)	+	(CTG)n	Simple_repeat	1	66	(0)	113504
19	25.6	2.9	5.7	chr1	58782585	58782687	(190173735)	+	(GCTGCC)n	Simple_repeat	1	106	(0)	113505
351	31.6	3.9	2.3	chr1	58814820	58814994	(190141428)	+	MIRb	SINE/MIR	45	222	(46)	113579
231	25.4	4.3	0.0	chr1	59061780	59061846	(189894576)	C	MER91A	DNA/hAT-Tip100	(122)	74	5	114107
1161	24.7	11.8	2.8	chr1	59061924	59062315	(189894107)	+	MLT1J2	LTR/ERVL-MaLR	17	448	(0)	114108
674	28.8	12.1	3.6	chr1	59485178	59485569	(189470853)	+	MLT1J	LTR/ERVL-MaLR	6	435	(77)	114949
11	27.7	0.0	2.2	chr1	61083454	61083498	(187872924)	+	(GGCCCC)n	Simple_repeat	1	45	(0)	117654
2048	12.6	0.3	1.4	chr1	62212938	62213230	(186743192)	+	AluSx1	SINE/Alu	1	290	(22)	119752
988	23.9	3.2	3.6	chr1	62213270	62213521	(186742901)	+	MLT1C	LTR/ERVL-MaLR	217	467	(0)	119753
19	0.0	0.0	0.0	chr1	62783687	62783707	(186172715)	+	(T)n	Simple_repeat	1	21	(0)	120815
354	33.4	5.1	1.4	chr1	63063151	63063313	(185893109)	+	MIR3	SINE/MIR	11	182	(26)	121313
191	21.9	4.7	0.0	chr1	63063418	63063458	(185892964)	+	MIRc	SINE/MIR	30	72	(196)	121314
900	14.9	5.6	0.0	chr1	63063520	63063687	(185892735)	+	MER20	DNA/hAT-Charlie	42	219	(0)	121315
398	22.4	8.1	5.3	chr1	63063688	63063819	(185892603)	+	MIRc	SINE/MIR	122	257	(11)	121314
774	29.0	16.2	3.0	chr1	64645491	64645991	(184310431)	C	MLT2E	LTR/ERVL	(54)	574	4	124259
994	27.4	10.1	4.5	chr1	65330767	65331170	(183625252)	C	MLT1J	LTR/ERVL-MaLR	(75)	437	1	125600
22	11.7	1.9	5.7	chr1	70221460	70221511	(178734911)	+	(GCG)n	Simple_repeat	1	53	(0)	133042
20	22.2	0.0	0.0	chr1	70221683	70221729	(178734693)	+	(GCG)n	Simple_repeat	1	47	(0)	133043
242	38.3	11.8	1.1	chr1	74502338	74502519	(174453903)	C	MIRb	SINE/MIR	(61)	207	4	138742
338	27.8	12.6	4.6	chr1	75630031	75630226	(173326196)	C	LTR78	LTR/ERV1	(353)	951	738	140211
15	30.4	1.4	2.7	chr1	75724615	75724686	(173231736)	+	(CCGCC)n	Simple_repeat	1	73	(0)	140345
14	14.6	0.0	3.1	chr1	77683302	77683333	(171273089)	+	(CGC)n	Simple_repeat	1	32	(0)	143293
18	24.2	0.0	3.5	chr1	77683479	77683535	(171272887)	+	(GGC)n	Simple_repeat	1	57	(0)	143294
183	22.9	0.0	2.8	chr1	81135184	81135219	(167821203)	+	MamTip2	DNA/hAT-Tip100	106	140	(165)	148046
733	30.8	3.8	4.4	chr1	81135296	81135611	(167820811)	+	LTR67B	LTR/ERVL	13	326	(294)	148047
615	33.3	9.3	1.7	chr1	82817767	82818053	(166138369)	C	LTR33B	LTR/ERVL	(126)	377	67	150335
2304	6.8	0.0	3.4	chr1	82818167	82818458	(166137964)	+	AluY	SINE/Alu	1	282	(29)	150339
709	30.4	8.3	11.4	chr1	85465554	85466028	(163490394)	C	L3	LINE/CR1	(160)	3939	3481	154199
13	29.5	1.4	4.2	chr1	86914936	86915006	(162041416)	+	(CCCCGCT)n	Simple_repeat	1	72	(0)	156335
4583	13.8	1.4	8.9	chr1	87286861	87287057	(161669365)	C	L1MC3	LINE/L1	(649)	7136	6941	156842
993	23.5	15.1	4.2	chr1	87287082	87287467	(161668955)	+	MLT1J	LTR/ERVL-MaLR	70	505	(7)	156845
622	30.4	6.0	4.0	chr1	89791417	89791890	(159164532)	+	MLT1J	LTR/ERVL-MaLR	1	444	(4)	160353
451	26.5	5.0	4.7	chr1	91552683	91552882	(157403540)	C	MLT1J2	LTR/ERVL-MaLR	(227)	221	22	162887
196	20.8	4.0	5.9	chr1	91552970	91553020	(157403402)	+	L2c	LINE/L2	3337	3386	(1)	162888
1424	27.6	12.5	4.0	chr1	92209763	92210821	(156745601)	C	L1M6	LINE/L1	(891)	1784	548	164075
237	31.8	2.3	3.4	chr1	92210865	92210952	(156745470)	C	L1M6	LINE/L1	(6015)	481	395	164075
231	30.3	3.6	7.0	chr1	92210943	92211084	(156745338)	C	L1M6	LINE/L1	(6067)	429	293	164075
12	27.8	3.9	0.0	chr1	93448023	93448074	(155508348)	+	(CCCCCTC)n	Simple_repeat	1	54	(0)	166315
1107	24.1	12.8	2.0	chr1	93757831	93758186	(155198236)	C	LTR16	LTR/ERVL	(2)	436	37	166798
718	22.2	25.1	4.1	chr1	93864101	93864525	(155091897)	C	LTR33A	LTR/ERVL	(0)	520	1	166950
362	32.9	10.1	10.1	chr1	94012140	94012603	(154943819)	+	L2c	LINE/L2	2917	3380	(7)	167156
19	9.8	0.0	2.9	chr1	94418422	94418456	(154537966)	+	(GCC)n	Simple_repeat	1	35	(0)	167758
2118	11.2	0.0	5.1	chr1	94598787	94599099	(154357323)	C	AluSc	SINE/Alu	(12)	297	1	168007
1724	27.4	5.0	2.9	chr1	94599100	94599401	(154357021)	C	MLT1J	LTR/ERVL-MaLR	(193)	319	5	168006
1556	24.4	9.0	1.0	chr1	95364640	95365057	(153591365)	+	LTR33A	LTR/ERVL	3	457	(63)	169251
827	31.4	5.0	3.7	chr1	99677354	99677790	(149278632)	C	MLT1J	LTR/ERVL-MaLR	(46)	466	24	175171
14	18.3	5.7	3.6	chr1	100539548	100539600	(148416822)	+	(GCT)n	Simple_repeat	1	56	(0)	176730
12	13.9	0.0	0.0	chr1	100896110	100896133	(148060289)	+	(GTGT)n	Simple_repeat	1	24	(0)	177180
12	12.6	3.7	0.0	chr1	107056667	107056693	(141899729)	+	(CCGCG)n	Simple_repeat	1	28	(0)	184892
1147	26.7	6.7	2.7	chr1	107908047	107908416	(141048006)	+	LTR33B	LTR/ERVL	9	394	(109)	186059
562	33.0	0.0	0.6	chr1	108068149	108068325	(140888097)	C	LTR33B	LTR/ERVL	(270)	233	58	186306
1180	28.9	7.6	4.5	chr1	108068371	108068706	(140887716)	+	HAL1	LINE/L1	1677	2010	(497)	186307
834	28.6	10.5	2.2	chr1	108082593	108083053	(140873369)	C	MLT1J	LTR/ERVL-MaLR	(8)	504	1	186329
445	36.1	8.3	2.9	chr1	108083056	108083496	(140872926)	+	L2b	LINE/L2	2896	3370	(5)	186325
10610	6.0	0.9	0.7	chr1	108535476	108536858	(140419564)	C	SVA_D	Retroposon/SVA	(0)	1386	1	186885
45	6.0	2.7	2.6	chr1	108536859	108536933	(140419489)	+	(GAGGGA)n	Simple_repeat	1	77	(0)	186886
853	25.0	5.5	1.8	chr1	108536964	108537191	(140419231)	+	MLT1J2	LTR/ERVL-MaLR	1	237	(211)	186887
15	20.3	4.4	0.0	chr1	108661127	108661171	(140295251)	+	(CCGCGC)n	Simple_repeat	1	47	(0)	187089
17	13.8	0.0	2.9	chr1	108692549	108692583	(140263839)	+	(CCCT)n	Simple_repeat	1	35	(0)	187164
17	19.2	2.0	2.0	chr1	108692627	108692691	(140263731)	+	(GCAGCA)n	Simple_repeat	1	65	(0)	187165
16	13.2	0.0	0.0	chr1	109483789	109483813	(139472609)	+	(G)n	Simple_repeat	1	25	(0)	188668
17	26.1	0.0	0.0	chr1	110211731	110211776	(138744646)	+	(GGC)n	Simple_repeat	1	46	(0)	189744
13	13.1	0.0	0.0	chr1	110674560	110674584	(138281838)	+	(CGC)n	Simple_repeat	1	25	(0)	190556
2038	24.8	11.0	5.2	chr1	110927199	110927818	(138028604)	C	MLT2F	LTR/ERVL	(0)	663	3	190906
1735	27.5	4.5	4.1	chr1	110927819	110927857	(138028565)	+	L1M5	LINE/L1	5076	5112	(1034)	190905
324	31.6	4.0	1.2	chr1	110927861	110928030	(138028392)	C	L1M6	LINE/L1	(4658)	1838	1664	190907
292	29.2	1.4	0.0	chr1	111755188	111755259	(137201163)	C	L2a	LINE/L2	(1018)	2401	2329	192020
13	25.3	1.8	3.6	chr1	113812295	113812349	(135144073)	+	(GCCC)n	Simple_repeat	1	56	(0)	195565
303	26.4	0.0	3.3	chr1	114524898	114524987	(134431435)	C	MLT1J2	LTR/ERVL-MaLR	(18)	430	344	196764
529	24.2	2.4	0.0	chr1	114525112	114525231	(134431191)	C	MLT1J2	LTR/ERVL-MaLR	(305)	143	21	196764
14	5.0	0.0	0.0	chr1	114757666	114757686	(134198736)	+	(CAC)n	Simple_repeat	1	21	(0)	197230
250	21.9	13.5	0.0	chr1	116485712	116485775	(132470647)	+	MER63D	DNA/hAT-Blackjack	1	74	(987)	199773
45	2.3	0.0	0.0	chr1	117367314	117367358	(131589064)	+	(GAG)n	Simple_repeat	1	45	(0)	201206
14	4.7	0.0	4.2	chr1	117367469	117367492	(131588930)	+	(GCG)n	Simple_repeat	1	24	(0)	201207
537	27.5	5.9	3.9	chr1	117564495	117564725	(131391697)	C	MLT1J	LTR/ERVL-MaLR	(260)	252	17	201485
15	16.4	2.9	0.0	chr1	119648153	119648186	(129308236)	+	(GCG)n	Simple_repeat	1	35	(0)	204334
57	3.4	0.0	0.0	chr1	119648189	119648248	(129308174)	+	(GCTG)n	Simple_repeat	1	60	(0)	204335
1273	6.1	0.0	1.8	chr1	120850818	120850985	(128105437)	C	U1	snRNA	(0)	165	1	206170
961	20.0	0.0	0.0	chr1	120942600	120942764	(128013658)	+	U1	snRNA	1	165	(0)	206303
1524	0.0	0.0	0.0	chr1	143729407	143729570	(105226852)	C	U1	snRNA	(1)	164	1	208249
22	12.8	0.0	0.0	chr1	143729646	143729679	(105226743)	+	(C)n	Simple_repeat	1	34	(0)	208250
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
22	22.9	0.0	0.0	chr1	144412465	144412510	(104543912)	+	G-rich	Low_complexity	1	46	(0)	209361
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1290	7.3	0.0	0.6	chr1	144551779	144551943	(104404479)	C	U1	snRNA	(1)	164	1	209607
19	14.4	0.0	0.0	chr1	145280999	145281039	(103675383)	+	(G)n	Simple_repeat	1	41	(0)	210763
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
13	19.2	6.1	1.9	chr1	145859802	145859850	(103096572)	+	(GGCTCG)n	Simple_repeat	1	52	(0)	211658
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
23	20.5	0.0	0.0	chr1	146376697	146376741	(102579681)	+	G-rich	Low_complexity	1	45	(0)	212532
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
267	27.6	1.3	0.0	chr1	148263083	148263158	(100693264)	+	Charlie4a	DNA/hAT-Charlie	381	457	(51)	215388
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
26	14.7	0.0	0.0	chr1	148303745	148303756	(100652666)	+	(CT)n	Simple_repeat	1	12	(0)	215460
2300	9.4	0.0	0.0	chr1	148303757	148304055	(100652367)	C	AluSc5	SINE/Alu	(9)	300	2	215461
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
1098	14.1	1.2	0.0	chr1	148402715	148402877	(100553545)	+	U1	snRNA	1	165	(0)	215662
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
677	15.8	19.5	14.8	chr1	148523127	148523417	(100433005)	C	AluJb	SINE/Alu	(0)	312	5	215839
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
248	32.8	0.0	0.0	chr1	149899324	149899384	(99057038)	+	MIR3	SINE/MIR	117	177	(31)	217964
225	25.8	2.1	4.1	chr1	150269399	150269495	(98686927)	+	L3b	LINE/CR1	4968	5062	(170)	218650
12	18.0	0.0	7.0	chr1	151288942	151288984	(97667438)	+	(CCTCTCT)n	Simple_repeat	1	43	(0)	220911
20	25.3	4.3	0.0	chr1	151612252	151612321	(97344101)	+	(CGG)n	Simple_repeat	1	73	(0)	221596
21	25.1	1.6	0.0	chr1	153946317	153946377	(95010045)	+	(GGCG)n	Simple_repeat	1	62	(0)	225116
12	17.5	3.1	0.0	chr1	153958498	153958529	(94997893)	+	(CTCC)n	Simple_repeat	1	33	(0)	225133
16	24.8	0.0	3.6	chr1	153958537	153958592	(94997830)	+	(GCCGCC)n	Simple_repeat	1	56	(0)	225134
19	25.9	0.0	4.5	chr1	153958837	153958903	(94997519)	+	GA-rich	Low_complexity	1	67	(0)	225135
13	8.7	4.0	0.0	chr1	154502729	154502753	(94453669)	+	(CCACT)n	Simple_repeat	1	26	(0)	226305
17	17.9	2.2	2.1	chr1	154558757	154558802	(94397620)	+	(CCTCCT)n	Simple_repeat	1	47	(0)	226415
209	22.1	0.0	10.5	chr1	154609323	154609398	(94347024)	C	L3b	LINE/CR1	(170)	5062	4995	226478
209	31.6	5.9	0.0	chr1	154609461	154609555	(94346867)	+	L2c	LINE/L2	2981	3081	(306)	226479
474	26.3	3.3	1.7	chr1	155125809	155125928	(93830494)	C	L2a	LINE/L2	(1)	3425	3304	227409
500	19.5	2.3	3.0	chr1	155140262	155140393	(93816029)	+	L1M1	LINE/L1	325	455	(7110)	227424
18	14.9	2.0	5.8	chr1	155196240	155196290	(93760132)	+	GA-rich	Low_complexity	1	52	(0)	227525
12	18.3	0.0	3.0	chr1	155255459	155255491	(93700931)	+	G-rich	Low_complexity	1	33	(0)	227628
12	24.4	0.0	4.3	chr1	155273439	155273485	(93682937)	+	(CCGGCT)n	Simple_repeat	1	47	(0)	227647
27	5.6	0.0	2.6	chr1	155562800	155562838	(93393584)	+	(CCT)n	Simple_repeat	1	39	(0)	228301
18	31.1	1.2	2.3	chr1	155562840	155562848	(93393574)	+	(CCCCCG)n	Simple_repeat	1	22	(65)	228302
23	17.6	0.0	3.6	chr1	155562849	155562903	(93393519)	+	(CCG)n	Simple_repeat	1	55	(0)	228303
18	31.1	1.2	2.3	chr1	155562904	155562925	(93393497)	+	(CCCCCG)n	Simple_repeat	23	87	(0)	228302
547	30.6	9.0	0.0	chr1	155967309	155967530	(92988892)	C	MIRb	SINE/MIR	(15)	253	1	229201
223	21.8	14.7	5.3	chr1	156054379	156054527	(92901895)	+	MIRc	SINE/MIR	99	268	(0)	229384
11	13.2	5.7	2.7	chr1	156054978	156055012	(92901410)	+	(CGAGCGG)n	Simple_repeat	1	37	(0)	229385
7832	6.0	0.9	0.2	chr1	156181461	156182421	(92774001)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	229656
459	27.3	13.3	0.7	chr1	156282076	156282226	(92674196)	C	MIR3	SINE/MIR	(17)	191	19	229844
1775	11.9	0.7	1.4	chr1	156356470	156356746	(92599676)	C	AluJr	SINE/Alu	(27)	285	11	230007
226	37.8	13.4	1.9	chr1	156401365	156401569	(92554853)	+	MIRb	SINE/MIR	18	249	(19)	230092
2494	6.0	0.0	0.0	chr1	156505620	156505917	(92450505)	+	AluSx4	SINE/Alu	2	299	(11)	230245
15	14.7	0.0	0.0	chr1	156624895	156624924	(92331498)	+	(CCGC)n	Simple_repeat	1	30	(0)	230474
2271	10.5	0.0	0.7	chr1	156722603	156722906	(92233516)	C	AluSq2	SINE/Alu	(11)	302	1	230636
22	26.1	3.1	3.0	chr1	156751706	156751805	(92204617)	+	(CCTCCC)n	Simple_repeat	1	100	(0)	230674
215	27.3	3.0	1.5	chr1	156752099	156752165	(92204257)	C	L2c	LINE/L2	(1)	3374	3307	230675
13	0.0	3.9	3.7	chr1	157926198	157926218	(91030204)	+	(GTTT)n	Simple_repeat	1	21	(0)	232352
2326	9.9	0.0	1.6	chr1	157926219	157926532	(91029890)	C	AluSx1	SINE/Alu	(3)	309	1	232353
13	21.9	1.9	5.6	chr1	159945550	159945602	(89010820)	+	(CTCCG)n	Simple_repeat	1	54	(0)	234978
272	37.2	4.9	2.5	chr1	160066911	160067111	(88889311)	C	L3b	LINE/CR1	(168)	5064	4859	235182
23	21.7	2.5	3.7	chr1	160262403	160262482	(88693940)	+	(CCACCG)n	Simple_repeat	1	82	(0)	235489
12	25.5	0.0	0.0	chr1	161726750	161726786	(87229636)	+	(CGCGG)n	Simple_repeat	1	37	(0)	237995
186	28.8	7.0	2.4	chr1	162148265	162148346	(86808076)	C	L2b	LINE/L2	(1)	3374	3289	238661
203	34.9	7.2	4.0	chr1	162148405	162148580	(86807842)	C	L2b	LINE/L2	(194)	3181	3000	238661
550	31.2	8.6	3.3	chr1	162148619	162149045	(86807377)	C	L2b	LINE/L2	(497)	2922	2471	238661
591	35.4	5.8	0.0	chr1	162215496	162215769	(86740653)	C	LTR88c	LTR/Gypsy?	(561)	301	11	238759
12	24.1	0.0	2.4	chr1	166839354	166839394	(82117028)	+	(GGCGCC)n	Simple_repeat	1	41	(0)	245775
2437	9.4	0.0	0.0	chr1	167552765	167553072	(81403350)	+	AluSx	SINE/Alu	1	308	(4)	246882
1520	16.8	15.4	0.0	chr1	168386250	168386541	(80569881)	+	MER2	DNA/TcMar-Tigger	1	345	(0)	248311
228	26.2	0.0	4.7	chr1	168386542	168386588	(80569834)	C	MLT1J1	LTR/ERVL-MaLR	(137)	311	265	248310
269	26.5	13.3	0.0	chr1	168386607	168386723	(80569699)	C	MLT1J1	LTR/ERVL-MaLR	(241)	207	73	248310
20	0.0	0.0	0.0	chr1	171486108	171486129	(77470293)	+	(T)n	Simple_repeat	1	22	(0)	252820
183	9.8	14.6	6.8	chr1	175072858	175072901	(73883521)	+	MamRTE1	LINE/RTE-BovB	2450	2497	(1315)	258185
303	32.3	5.7	0.0	chr1	175748836	175748968	(73207454)	+	L3	LINE/CR1	3951	4091	(8)	259150
734	27.8	12.8	5.8	chr1	175848215	175848677	(73107745)	C	MLT1J	LTR/ERVL-MaLR	(12)	500	1	259317
1000	22.8	4.4	2.1	chr1	175848679	175848969	(73107453)	+	L1MEi	LINE/L1	1485	1782	(430)	259312
13	15.2	0.0	3.2	chr1	179082230	179082260	(69874162)	+	G-rich	Low_complexity	1	31	(0)	264111
12	18.1	0.0	3.0	chr1	179743629	179743661	(69212761)	+	(CTGGCT)n	Simple_repeat	1	33	(0)	265237
12	19.6	2.9	0.0	chr1	179954761	179954795	(69001627)	+	(CGCAGC)n	Simple_repeat	1	36	(0)	265605
12	12.2	3.7	0.0	chr1	182391717	182391743	(66564679)	+	GA-rich	Low_complexity	1	28	(0)	269390
865	28.9	1.5	0.0	chr1	182995614	182995873	(65960549)	C	ERVL-E-int	LTR/ERVL	(1110)	4557	4294	270413
376	26.6	9.2	0.7	chr1	182995974	182996113	(65960309)	+	MLT1J	LTR/ERVL-MaLR	18	170	(342)	270414
54	11.6	2.8	2.7	chr1	183023087	183023194	(65933228)	+	(CCCTC)n	Simple_repeat	1	111	(0)	270460
18	23.4	0.0	0.0	chr1	183252137	183252176	(65704246)	+	A-rich	Low_complexity	1	40	(0)	270791
12	18.4	5.4	0.0	chr1	183252400	183252436	(65703986)	+	(CCCACA)n	Simple_repeat	1	39	(0)	270792
16	25.5	0.0	3.6	chr1	193122096	193122150	(55834272)	+	GA-rich	Low_complexity	1	55	(0)	284394
16	18.3	2.1	4.2	chr1	193122142	193122188	(55834234)	+	(GGC)n	Simple_repeat	1	48	(0)	284395
17	11.1	0.0	0.0	chr1	200409951	200409979	(48546443)	+	(CCG)n	Simple_repeat	1	29	(0)	294193
11	14.4	7.5	2.3	chr1	201399325	201399364	(47557058)	+	(GGCCGCC)n	Simple_repeat	1	43	(0)	295946
268	24.6	1.4	2.8	chr1	201707906	201707976	(47248446)	+	MIRb	SINE/MIR	5	74	(194)	296513
33	3.1	0.0	0.0	chr1	201708441	201708473	(47247949)	+	(CA)n	Simple_repeat	1	33	(0)	296514
1497	7.4	0.0	0.0	chr1	201714021	201714210	(47242212)	C	AluSz	SINE/Alu	(122)	190	1	296522
14	14.9	5.4	0.0	chr1	201714330	201714366	(47242056)	+	(CCTTCT)n	Simple_repeat	1	39	(0)	296523
740	27.2	6.7	0.3	chr1	202667108	202667438	(46288984)	C	LTR33A	LTR/ERVL	(84)	436	47	298281
56	0.0	0.0	0.0	chr1	202667467	202667514	(46288908)	+	(GT)n	Simple_repeat	1	48	(0)	298282
2452	9.0	0.0	0.0	chr1	202667701	202668010	(46288412)	C	AluSg	SINE/Alu	(0)	310	1	298283
721	28.9	5.2	1.7	chr1	203271098	203271336	(45685086)	C	MLT1J	LTR/ERVL-MaLR	(264)	248	1	299324
365	24.0	5.5	2.4	chr1	203452216	203452355	(45504067)	C	MIR	SINE/MIR	(0)	268	124	299623
672	28.6	15.8	2.1	chr1	203452486	203452890	(45503532)	+	MLT1J	LTR/ERVL-MaLR	1	512	(0)	299624
761	27.8	3.4	7.1	chr1	203539898	203540350	(45416072)	C	MLT1J1	LTR/ERVL-MaLR	(8)	436	1	299789
2307	10.0	0.3	0.3	chr1	203554738	203555047	(45401375)	+	AluSx	SINE/Alu	1	310	(2)	299824
746	29.6	2.7	0.8	chr1	203555053	203555304	(45401118)	C	MLT1J	LTR/ERVL-MaLR	(214)	298	42	299825
2404	8.2	0.0	1.0	chr1	204080907	204081212	(44875210)	C	AluSp	SINE/Alu	(10)	303	1	300943
380	27.2	6.5	11.4	chr1	204515966	204516016	(44440406)	C	L3	LINE/CR1	(391)	3708	3665	301689
17	9.8	3.0	0.0	chr1	205445173	205445205	(43511217)	+	(CTCTCC)n	Simple_repeat	1	34	(0)	303448
12	15.8	0.0	3.3	chr1	206507456	206507485	(42448937)	+	(CCGCC)n	Simple_repeat	1	30	(0)	305208
810	23.8	1.6	1.1	chr1	206563102	206563292	(42393130)	C	MLT1J2	LTR/ERVL-MaLR	(256)	192	1	305303
189	32.5	0.0	10.1	chr1	206563434	206563522	(42392900)	+	L2c	LINE/L2	3269	3348	(39)	305304
15	15.3	2.6	2.6	chr1	207321816	207321853	(41634569)	+	(GCT)n	Simple_repeat	1	39	(0)	306485
15	20.4	0.0	0.0	chr1	211259202	211259230	(37697192)	+	(C)n	Simple_repeat	1	29	(0)	312388
1658	17.4	1.8	13.0	chr1	211889199	211889364	(37067058)	C	MLT1B	LTR/ERVL-MaLR	(117)	273	147	313556
9291	7.9	14.5	0.4	chr1	211889365	211890718	(37065704)	+	LTR12C	LTR/ERV1	3	1579	(0)	313558
38	0.0	2.8	0.0	chr1	218052138	218052173	(30904249)	+	(AT)n	Simple_repeat	1	37	(0)	322607
574	27.9	3.1	0.6	chr1	218052392	218052550	(30903872)	+	MLT1J2	LTR/ERVL-MaLR	52	214	(234)	322608
2392	9.5	0.3	0.0	chr1	218052601	218052906	(30903516)	+	AluSc	SINE/Alu	1	307	(2)	322609
944	28.7	4.2	7.3	chr1	218873320	218873714	(30082708)	C	MLT1J2	LTR/ERVL-MaLR	(33)	415	34	323879
703	24.9	5.3	8.8	chr1	223374045	223374481	(25581941)	C	MLT1J	LTR/ERVL-MaLR	(30)	482	30	330592
16	25.2	1.7	3.3	chr1	224114132	224114191	(24842231)	+	(GGC)n	Simple_repeat	1	61	(0)	331817
805	12.5	0.8	2.5	chr1	224356517	224356636	(24599786)	+	FRAM	SINE/Alu	38	155	(21)	332413
13	14.6	8.5	2.0	chr1	224357171	224357217	(24599205)	+	(CTGCC)n	Simple_repeat	1	51	(0)	332414
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
2431	9.0	0.3	0.3	chr1	226084155	226084466	(22871956)	+	AluSz	SINE/Alu	1	312	(0)	335166
2248	10.5	0.0	0.0	chr1	229210528	229210812	(19745610)	+	AluSx1	SINE/Alu	1	285	(27)	339860
31	0.0	0.0	0.0	chr1	229210813	229210841	(19745581)	+	(AAAT)n	Simple_repeat	1	29	(0)	339861
603	20.3	7.1	5.3	chr1	229210980	229211130	(19745292)	C	MLT1J2	LTR/ERVL-MaLR	(286)	162	9	339859
444	30.1	4.9	1.9	chr1	229211131	229211289	(19745133)	C	MIRb	SINE/MIR	(54)	214	51	339862
1561	17.9	1.6	4.7	chr1	229430487	229430805	(19525617)	+	AluJr	SINE/Alu	3	311	(1)	340254
16	18.6	6.1	0.0	chr1	230426471	230426519	(18529903)	+	G-rich	Low_complexity	1	52	(0)	341849
29	21.2	3.6	1.2	chr1	230978735	230978817	(17977605)	+	(CAG)n	Simple_repeat	1	86	(0)	342721
24	12.3	2.3	0.0	chr1	233295575	233295618	(15660804)	+	(GCC)n	Simple_repeat	1	45	(0)	346165
67	20.3	0.6	3.1	chr1	233295855	233296013	(15660409)	+	(TTTC)n	Simple_repeat	1	160	(0)	346166
14	16.2	1.8	8.6	chr1	234608656	234608712	(14347710)	+	(GCGGCC)n	Simple_repeat	1	58	(0)	348163
692	30.9	10.8	6.2	chr1	234675975	234676570	(14279852)	+	L1ME3A	LINE/L1	143	769	(5727)	348265
14	12.6	0.0	7.5	chr1	234760507	234760546	(14195876)	+	G-rich	Low_complexity	1	40	(0)	348398
303	27.8	11.9	1.6	chr1	234912244	234912371	(14044051)	+	MIR	SINE/MIR	118	260	(2)	348650
15	3.6	6.5	3.0	chr1	244835195	244835233	(4121189)	+	(GGGCTG)n	Simple_repeat	1	40	(0)	364892
12	20.1	6.2	2.0	chr1	247332000	247332047	(1624375)	+	G-rich	Low_complexity	1	51	(0)	368975
1102	24.7	10.4	3.3	chr1	247447492	247447980	(1508442)	+	L1MC5	LINE/L1	8773	9300	(4)	369196
13	5.3	0.0	0.0	chr1	247448215	247448234	(1508188)	+	(CGG)n	Simple_repeat	1	20	(0)	369197
20	0.0	0.0	0.0	chr1	247448269	247448290	(1508132)	+	(T)n	Simple_repeat	1	22	(0)	369198
218	21.7	4.8	4.8	chr1	248858380	248858442	(97980)	+	MIR3	SINE/MIR	104	166	(42)	370896
1559	31.3	11.3	6.9	chr1	248859306	248860350	(96072)	+	L2a	LINE/L2	1651	2699	(720)	370897
21	0.0	7.5	4.7	chr10	4826284	4826323	(128971099)	+	(GCG)n	Simple_repeat	1	43	(0)	376971
13	11.5	2.2	8.7	chr10	5813816	5813860	(127983562)	+	G-rich	Low_complexity	1	46	(0)	378340
23	24.3	1.1	5.4	chr10	6088932	6088964	(127708458)	+	G-rich	Low_complexity	1	92	(0)	378878
31	13.2	1.7	0.0	chr10	6088965	6089022	(127708400)	+	(GGCGCA)n	Simple_repeat	1	59	(0)	378879
1118	34.5	8.8	1.8	chr10	7577085	7577698	(126219724)	C	L3	LINE/CR1	(5)	4094	3434	381242
453	28.0	1.9	1.6	chr10	7577708	7577875	(126219547)	+	MIR	SINE/MIR	30	195	(13)	381243
722	27.5	8.4	2.6	chr10	7577906	7578174	(126219248)	+	MLT1J	LTR/ERVL-MaLR	87	372	(140)	381244
19	0.0	9.7	0.0	chr10	11611514	11611544	(122185878)	+	(CGG)n	Simple_repeat	1	34	(0)	387153
17	12.9	0.0	2.8	chr10	13347772	13347807	(120449615)	+	(CGGCGG)n	Simple_repeat	1	36	(0)	390595
1943	13.3	5.2	0.0	chr10	16120359	16120666	(117676756)	+	MER1A	DNA/hAT-Charlie	204	528	(1)	395286
585	24.5	2.7	2.0	chr10	16120687	16120832	(117676590)	C	LTR33C	LTR/ERVL	(480)	149	3	395287
736	25.2	11.3	3.2	chr10	16429540	16429822	(117367600)	C	MLT1J1	LTR/ERVL-MaLR	(115)	329	21	395801
1908	12.8	0.7	0.0	chr10	16429949	16430214	(117367208)	+	AluSz	SINE/Alu	14	281	(31)	395804
13	14.1	0.0	5.7	chr10	21526051	21526085	(112271337)	+	(CCCCGC)n	Simple_repeat	1	35	(0)	403870
15	23.6	2.2	0.0	chr10	21526167	21526211	(112271211)	+	G-rich	Low_complexity	1	46	(0)	403871
673	0.0	0.0	0.0	chr10	22229508	22229582	(111567840)	C	tRNA-Asn-AAC	tRNA	(2)	75	1	404961
28	3.3	0.0	0.0	chr10	23055850	23055880	(110741542)	+	(T)n	Simple_repeat	1	31	(0)	406197
15	22.4	0.0	5.8	chr10	23192809	23192860	(110604562)	+	(CGG)n	Simple_repeat	1	52	(0)	406425
32	20.0	5.7	3.9	chr10	23192932	23193054	(110604368)	+	(CGG)n	Simple_repeat	1	130	(0)	406426
16	24.9	0.0	6.2	chr10	24952859	24952922	(108844500)	+	(GCC)n	Simple_repeat	1	64	(0)	409452
15	18.9	2.2	4.3	chr10	26860996	26861041	(106936381)	+	(CCT)n	Simple_repeat	1	47	(0)	412439
404	31.2	10.8	3.5	chr10	27503748	27503979	(106293443)	C	MIRc	SINE/MIR	(4)	264	14	413544
770	17.4	6.0	2.3	chr10	27740924	27741099	(106056323)	+	MER5A	DNA/hAT-Charlie	3	185	(4)	413916
13	18.5	7.0	0.0	chr10	27745612	27745654	(106051768)	+	G-rich	Low_complexity	1	46	(0)	413919
17	16.7	2.4	2.3	chr10	32056201	32056242	(101741180)	+	(GGC)n	Simple_repeat	1	43	(0)	421235
13	4.3	3.9	3.7	chr10	32347086	32347114	(101450308)	+	(CCGCT)n	Simple_repeat	1	29	(0)	421822
1027	21.8	13.4	3.0	chr10	34791595	34791860	(99005562)	+	AluJr	SINE/Alu	2	299	(13)	425283
630	19.8	0.9	0.0	chr10	34792272	34792382	(99005040)	C	AluJr	SINE/Alu	(199)	113	2	425284
24	15.5	2.0	0.0	chr10	34814822	34814871	(98982551)	+	(CCCGCC)n	Simple_repeat	1	51	(0)	425323
37	27.4	3.7	4.1	chr10	35640753	35640941	(98156481)	+	(GCC)n	Simple_repeat	1	196	(0)	426868
27	16.4	5.6	4.3	chr10	35640872	35640960	(98156462)	+	(CGG)n	Simple_repeat	1	94	(0)	426869
17	19.1	0.0	5.7	chr10	37976528	37976580	(95820842)	+	(CCCGG)n	Simple_repeat	1	53	(0)	430348
24	22.5	5.1	2.9	chr10	43203182	43203279	(90594143)	+	(CCCTGCC)n	Simple_repeat	1	103	(0)	433077
31	0.0	0.0	2.9	chr10	43396888	43396921	(90400501)	+	(GGGAG)n	Simple_repeat	1	34	(0)	433409
19	15.9	2.4	0.0	chr10	43648829	43648870	(90148552)	+	(GCCGGC)n	Simple_repeat	1	43	(0)	433924
26	0.0	6.2	0.0	chr10	44959722	44959753	(88837669)	+	(GGGGCGA)n	Simple_repeat	1	34	(0)	435466
224	18.5	2.0	0.8	chr10	45673228	45673289	(88124133)	+	MIRb	SINE/MIR	103	163	(105)	436410
2267	19.2	12.2	1.6	chr10	46529196	46529751	(87267671)	+	Tigger9b	DNA/TcMar-Tigger	1	623	(1)	437806
12	24.7	4.4	4.2	chr10	46556178	46556245	(87241177)	+	G-rich	Low_complexity	1	71	(0)	437854
11	24.3	4.0	1.9	chr10	46556353	46556402	(87241020)	+	G-rich	Low_complexity	1	52	(0)	437855
431	31.8	6.9	0.4	chr10	48550089	48550347	(85247075)	+	L2c	LINE/L2	3042	3318	(69)	440697
638	24.1	17.0	3.6	chr10	48550381	48550764	(85246658)	+	MLT1J2	LTR/ERVL-MaLR	3	448	(0)	440698
12	13.9	0.0	0.0	chr10	49164955	49164978	(84632444)	+	(TTCA)n	Simple_repeat	1	24	(0)	441535
737	29.4	2.9	1.9	chr10	49237709	49238034	(84559388)	C	LTR81A	LTR/Gypsy	(875)	475	142	441638
316	29.8	0.0	0.0	chr10	49238116	49238199	(84559223)	+	LTR67B	LTR/ERVL	76	159	(461)	441639
552	30.2	4.1	0.0	chr10	49238344	49238532	(84558890)	+	MLT1J2	LTR/ERVL-MaLR	357	553	(9)	441637
3422	11.9	13.0	2.6	chr10	50797591	50798237	(82999185)	+	LTR8A	LTR/ERV1	1	724	(3)	443885
1156	24.8	14.1	3.1	chr10	50798345	50798798	(82998624)	+	MLT1J	LTR/ERVL-MaLR	1	512	(0)	443886
377	39.8	9.9	0.6	chr10	52030056	52030495	(81766927)	+	L2b	LINE/L2	2833	3324	(51)	445741
260	33.5	14.2	2.4	chr10	52030573	52030777	(81766645)	+	Tigger15a	DNA/TcMar-Tigger	297	529	(186)	445742
194	20.0	0.0	0.0	chr10	58334728	58334767	(75462655)	C	MIRc	SINE/MIR	(112)	156	117	453992
16	8.2	0.0	0.0	chr10	58334920	58334945	(75462477)	+	(GGCGG)n	Simple_repeat	1	26	(0)	453993
15	30.4	0.0	0.0	chr10	59176503	59176546	(74620876)	+	(CG)n	Simple_repeat	1	44	(0)	455189
14	14.4	5.0	2.4	chr10	59362668	59362707	(74434715)	+	G-rich	Low_complexity	1	42	(0)	455458
16	10.8	0.0	3.1	chr10	59362912	59362943	(74434479)	+	(CACCC)n	Simple_repeat	1	32	(0)	455459
12	16.0	0.0	3.3	chr10	60733174	60733203	(73064219)	+	(GCCC)n	Simple_repeat	1	30	(0)	457512
504	34.0	7.7	7.3	chr10	61773428	61774066	(72023356)	C	L2b	LINE/L2	(8)	3367	2731	459026
897	29.7	5.9	2.8	chr10	61774116	61774506	(72022916)	+	MLT1J1	LTR/ERVL-MaLR	20	423	(21)	459027
17	3.6	0.0	6.2	chr10	62818491	62818522	(70978900)	+	(AAGA)n	Simple_repeat	1	32	(0)	460646
13	20.3	0.0	4.7	chr10	62818928	62818970	(70978452)	+	G-rich	Low_complexity	1	43	(0)	460647
15	20.2	4.3	0.0	chr10	63010268	63010313	(70787109)	+	(ATAATGC)n	Simple_repeat	1	48	(0)	460974
435	18.3	2.8	0.4	chr10	63010321	63010414	(70787008)	+	LTR67B	LTR/ERVL	26	124	(496)	460975
271	15.5	1.7	1.7	chr10	63010373	63010431	(70786991)	+	MLT1J	LTR/ERVL-MaLR	97	155	(357)	460976
280	29.5	0.0	13.3	chr10	63010570	63010659	(70786763)	C	L2a	LINE/L2	(8)	3418	3302	460977
17	5.0	0.0	0.0	chr10	67838391	67838411	(65959011)	+	(A)n	Simple_repeat	1	21	(0)	468005
58	7.6	0.0	1.2	chr10	67849220	67849359	(65948063)	+	(GGAGG)n	Simple_repeat	1	138	(0)	468032
569	3.2	0.0	0.0	chr10	68472182	68472243	(65325179)	C	AluYa5	SINE/Alu	(99)	212	151	469298
534	15.3	1.1	0.9	chr10	69994448	69994544	(63802878)	C	MLT1J	LTR/ERVL-MaLR	(338)	174	37	472575
454	31.1	8.9	2.5	chr10	69994576	69994941	(63802481)	+	L1ME3G	LINE/L1	151	542	(382)	472576
13	5.2	0.0	0.0	chr10	70145987	70146006	(63651416)	+	(CTC)n	Simple_repeat	1	20	(0)	472841
15	7.3	6.9	0.0	chr10	70146167	70146195	(63651227)	+	(GCA)n	Simple_repeat	1	31	(0)	472842
1536	23.6	6.0	1.5	chr10	70528722	70529117	(63268305)	C	MLT1J	LTR/ERVL-MaLR	(97)	415	1	473663
1178	27.4	7.6	3.2	chr10	71323271	71323737	(62473685)	C	MLT1J	LTR/ERVL-MaLR	(9)	503	15	475005
16	17.1	0.0	0.0	chr10	71810593	71810625	(61986797)	+	(CTGC)n	Simple_repeat	1	33	(0)	475951
198	25.5	0.0	0.0	chr10	71810748	71810794	(61986628)	+	MIR1_Amn	SINE/MIR	108	154	(76)	475952
2295	10.5	0.3	0.7	chr10	71810799	71811103	(61986319)	+	AluSx	SINE/Alu	1	304	(8)	475953
16	17.5	5.5	3.5	chr10	72692474	72692528	(61104894)	+	G-rich	Low_complexity	1	58	(0)	477844
193	33.5	9.7	5.1	chr10	73252891	73253107	(60544315)	C	L2b	LINE/L2	(59)	3316	3089	478926
28	28.2	1.6	4.0	chr10	73495826	73495949	(60301473)	+	G-rich	Low_complexity	1	126	(0)	479398
31	12.6	0.0	0.0	chr10	73773091	73773151	(60024271)	+	(CCAGGACT)n	Simple_repeat	1	61	(0)	479920
16	14.4	2.5	2.4	chr10	73998373	73998412	(59799010)	+	G-rich	Low_complexity	1	41	(0)	480357
647	29.4	4.3	2.6	chr10	73998479	73998705	(59798717)	+	MIRb	SINE/MIR	30	260	(8)	480358
24	31.9	1.0	1.9	chr10	74826673	74826776	(58970646)	+	(GGC)n	Simple_repeat	1	105	(0)	481944
317	12.0	0.0	2.0	chr10	75057816	75057866	(58739556)	+	MLT1J	LTR/ERVL-MaLR	85	134	(378)	482332
257	13.2	0.0	0.0	chr10	75057834	75057871	(58739551)	+	MLT1J	LTR/ERVL-MaLR	64	101	(347)	482332
900	27.7	4.2	3.9	chr10	75057914	75058198	(58739224)	+	MLT1J	LTR/ERVL-MaLR	224	509	(3)	482332
439	31.7	6.8	8.0	chr10	75106259	75106803	(58690619)	+	L2b	LINE/L2	2910	3426	(0)	482434
358	26.8	3.0	5.9	chr10	75106814	75106948	(58690474)	C	MIR3	SINE/MIR	(15)	193	63	482435
728	24.4	7.6	5.3	chr10	75956623	75956903	(57840519)	C	MLT1J	LTR/ERVL-MaLR	(141)	371	84	483848
275	27.9	15.1	0.8	chr10	77925199	77925328	(55872094)	+	MIRb	SINE/MIR	111	262	(6)	486825
1305	24.9	1.7	0.3	chr10	77946113	77946398	(55851024)	C	MLT1J	LTR/ERVL-MaLR	(220)	292	3	486870
428	20.9	1.1	0.0	chr10	78272506	78272591	(55524831)	C	MLT1J	LTR/ERVL-MaLR	(326)	186	100	487503
1457	23.3	3.5	0.3	chr10	78272596	78272922	(55524500)	C	MER58B	DNA/hAT-Charlie	(3)	338	1	487504
21	19.9	6.6	0.0	chr10	78974432	78974492	(54822930)	+	(TCTT)n	Simple_repeat	1	65	(0)	488806
853	24.2	5.0	0.4	chr10	78974938	78975165	(54822257)	C	MIR	SINE/MIR	(21)	241	3	488807
14	7.8	3.7	0.0	chr10	79826997	79827023	(53970399)	+	(CCTCG)n	Simple_repeat	1	28	(0)	490211
1761	12.6	0.0	6.5	chr10	79904212	79904536	(53892886)	C	AluJo	SINE/Alu	(8)	304	1	490307
13	18.9	0.0	0.0	chr10	80079182	80079211	(53718211)	+	G-rich	Low_complexity	1	30	(0)	490603
907	27.0	17.1	2.1	chr10	80684288	80684718	(53112704)	+	MLT1J	LTR/ERVL-MaLR	1	509	(3)	491621
577	31.6	6.6	6.6	chr10	83917275	83917593	(49879829)	C	L1M6	LINE/L1	(4639)	1857	1539	496015
342	36.1	9.0	0.9	chr10	84291848	84292062	(49505360)	C	MIRb	SINE/MIR	(14)	254	21	496629
399	27.6	4.1	5.3	chr10	84944313	84944506	(48852916)	C	LTR33A_	LTR/ERVL	(586)	209	2	497529
487	29.9	8.8	0.9	chr10	84944573	84944801	(48852621)	C	MLT1K	LTR/ERVL-MaLR	(6)	589	341	497530
831	33.1	8.3	2.0	chr10	86349791	86350451	(47446971)	C	L2b	LINE/L2	(7)	3368	2659	499347
14	13.2	2.9	2.8	chr10	86521953	86521987	(47275435)	+	G-rich	Low_complexity	1	36	(0)	499654
27	16.1	4.1	2.6	chr10	91410234	91410306	(42387116)	+	G-rich	Low_complexity	1	76	(0)	507281
18	25.9	1.3	5.2	chr10	91410354	91410429	(42386993)	+	(CGC)n	Simple_repeat	1	77	(0)	507282
15	27.3	3.1	1.5	chr10	91798701	91798764	(41998658)	+	(GCCGCG)n	Simple_repeat	1	66	(0)	507864
29	15.5	1.5	2.9	chr10	92242987	92243054	(41554368)	+	(TTTGTT)n	Simple_repeat	1	69	(0)	508667
1163	23.7	10.9	6.4	chr10	92802101	92802582	(40994840)	+	MLT1J	LTR/ERVL-MaLR	6	511	(1)	509927
876	28.4	1.5	4.1	chr10	93752120	93752387	(40045035)	+	MIR	SINE/MIR	2	262	(0)	511722
3762	19.0	2.9	6.0	chr10	93857774	93858064	(39939358)	+	MER44C	DNA/TcMar-Tigger	473	732	(1)	511929
337	28.7	5.0	2.5	chr10	93858074	93858191	(39939231)	+	LTR78B	LTR/ERV1	544	664	(632)	511926
395	20.7	10.5	7.6	chr10	93858252	93858408	(39939014)	+	MLT1J	LTR/ERVL-MaLR	90	251	(261)	511931
544	26.6	6.1	0.0	chr10	93858494	93858632	(39938790)	+	LTR78B	LTR/ERV1	1044	1191	(105)	511926
3509	6.0	0.0	0.7	chr10	95231193	95231643	(38565779)	+	LTR7	LTR/ERV1	1	448	(2)	513935
22	9.7	0.0	0.0	chr10	97082303	97082336	(36715086)	+	(GTG)n	Simple_repeat	1	34	(0)	517220
320	20.9	6.1	26.8	chr10	97082337	97082423	(36714999)	C	MIR	SINE/MIR	(9)	253	192	517221
437	28.9	3.8	0.7	chr10	97497898	97498050	(36299372)	+	MIRc	SINE/MIR	3	160	(108)	518102
224	27.9	12.7	1.0	chr10	97687725	97687820	(36109602)	+	MIR	SINE/MIR	5	114	(154)	518502
365	34.5	7.3	8.9	chr10	97687845	97688293	(36109129)	C	L2c	LINE/L2	(4)	3371	2931	518503
600	30.3	12.1	7.9	chr10	97726499	97726853	(36070569)	C	MLT1J2	LTR/ERVL-MaLR	(16)	432	61	518603
14	18.2	0.0	0.0	chr10	97737144	97737174	(36060248)	+	(GCG)n	Simple_repeat	1	31	(0)	518629
257	31.2	20.9	0.6	chr10	98134109	98134440	(35662982)	C	L2a	LINE/L2	(1177)	2242	1826	519432
654	24.5	4.1	3.0	chr10	98833488	98833655	(34963767)	C	MIR	SINE/MIR	(2)	260	91	520551
417	29.9	8.3	1.7	chr10	98833656	98833835	(34963587)	+	MLT1J2	LTR/ERVL-MaLR	1	193	(255)	520552
18	0.0	0.0	0.0	chr10	100971117	100971136	(32826286)	+	(TG)n	Simple_repeat	1	20	(0)	524275
11	24.1	0.0	0.0	chr10	101067891	101067924	(32729498)	+	G-rich	Low_complexity	1	34	(0)	524413
1899	15.4	2.7	0.0	chr10	101080612	101080897	(32716525)	C	AluJb	SINE/Alu	(18)	294	1	524441
18	23.5	6.1	0.0	chr10	101080978	101081043	(32716379)	+	GA-rich	Low_complexity	1	70	(0)	524442
1367	26.1	6.6	1.8	chr10	101258104	101258537	(32538885)	C	MLT1J	LTR/ERVL-MaLR	(37)	475	20	524751
292	25.4	6.2	3.9	chr10	102056410	102056536	(31740886)	+	L1ME4b	LINE/L1	360	489	(403)	526188
363	32.3	11.4	2.5	chr10	102419932	102420131	(31377291)	+	MIRc	SINE/MIR	5	224	(44)	526880
342	26.1	9.0	3.5	chr10	102503098	102503296	(31294126)	C	Charlie18a	DNA/hAT-Charlie	(62)	280	70	527054
1371	7.6	0.0	6.1	chr10	102854662	102854859	(30942563)	+	AluSp	SINE/Alu	32	217	(96)	527720
19	3.3	3.0	2.9	chr10	103277375	103277407	(30520015)	+	(CCTCGG)n	Simple_repeat	1	34	(0)	528586
12	25.1	4.3	0.0	chr10	103277411	103277457	(30519965)	+	(GCCGGCG)n	Simple_repeat	1	49	(0)	528587
237	28.4	2.8	0.5	chr10	104824612	104824692	(28972730)	C	L2a	LINE/L2	(39)	3387	3281	531350
1459	5.0	0.0	0.0	chr10	111936046	111936226	(21861196)	+	L1PA4	LINE/L1	5972	6152	(3)	541869
532	26.5	8.7	0.0	chr10	111936267	111936402	(21861020)	+	LTR33A	LTR/ERVL	25	173	(347)	541870
832	27.4	1.7	0.0	chr10	111936467	111936692	(21860730)	+	LTR33A	LTR/ERVL	283	512	(8)	541870
1219	26.4	8.8	4.7	chr10	112842829	112843296	(20954126)	C	LTR33B	LTR/ERVL	(0)	503	15	543295
442	30.7	10.6	5.0	chr10	114407703	114408041	(19389381)	C	L2c	LINE/L2	(96)	3291	2932	545884
202	23.5	12.8	1.9	chr10	114408349	114408452	(19388970)	C	L2c	LINE/L2	(30)	3396	3280	545885
2645	19.5	8.0	5.0	chr10	114811576	114812217	(18985205)	C	MLT2F	LTR/ERVL	(0)	663	1	546573
305	22.8	0.0	0.0	chr10	114812388	114812444	(18984978)	C	ERVL-E-int	LTR/ERVL	(199)	5468	5412	546574
685	26.2	9.9	2.6	chr10	117187406	117187685	(16609737)	+	MLT1J	LTR/ERVL-MaLR	5	276	(236)	550026
15	18.9	0.0	8.8	chr10	119104378	119104434	(14692988)	+	(CCCG)n	Simple_repeat	1	57	(0)	553223
12	19.3	4.7	2.2	chr10	119207493	119207535	(14589887)	+	(GCGCCT)n	Simple_repeat	1	45	(0)	553463
19	10.0	0.0	0.0	chr10	119818781	119818812	(13978610)	+	(GACG)n	Simple_repeat	1	32	(0)	554648
889	31.5	6.6	7.3	chr10	121426369	121426974	(12370448)	+	LTR67B	LTR/ERVL	19	620	(0)	557144
13	24.1	4.8	3.1	chr10	121927973	121928034	(11869388)	+	(GCC)n	Simple_repeat	1	65	(0)	557959
13	14.0	4.7	4.4	chr10	122374765	122374807	(11422615)	+	(GCCGCG)n	Simple_repeat	1	45	(0)	558776
39	0.0	0.0	0.0	chr10	122980724	122980759	(10816663)	+	(GCGGG)n	Simple_repeat	1	36	(0)	559574
1326	22.1	22.0	1.8	chr10	123175468	123175965	(10621457)	+	LTR33C	LTR/ERVL	3	629	(0)	559885
19	22.1	0.0	8.6	chr10	123666291	123666371	(10131051)	+	(GGC)n	Simple_repeat	1	81	(0)	560715
602	14.4	8.5	2.5	chr10	123945649	123945769	(9851653)	+	MLT1J1	LTR/ERVL-MaLR	20	148	(296)	561142
1234	25.1	5.2	1.3	chr10	123945772	123946155	(9851267)	+	L1MB8	LINE/L1	5779	6178	(0)	561143
257	35.8	10.0	1.8	chr10	124460005	124460288	(9337134)	+	L2c	LINE/L2	3072	3381	(6)	561973
315	15.0	17.8	0.0	chr10	124460327	124460386	(9337036)	+	LTR67B	LTR/ERVL	76	148	(472)	561974
16	15.4	2.8	0.0	chr10	124461792	124461827	(9335595)	+	(GCGCCG)n	Simple_repeat	1	37	(0)	561977
212	38.1	1.9	0.0	chr10	124652315	124652419	(9145003)	C	MIRc	SINE/MIR	(93)	175	69	562261
278	27.6	2.8	6.2	chr10	124652478	124652589	(9144833)	+	MIR3	SINE/MIR	55	162	(46)	562262
17	13.8	5.0	0.0	chr10	124791785	124791824	(9005598)	+	(ACCGCC)n	Simple_repeat	1	42	(0)	562470
613	26.4	11.1	3.1	chr10	125284797	125285225	(8512197)	C	MLT1J	LTR/ERVL-MaLR	(4)	508	6	563272
180	24.1	4.4	6.5	chr10	125718957	125719049	(8078373)	+	MER5A	DNA/hAT-Charlie	34	124	(65)	563920
740	28.5	5.0	5.0	chr10	130707249	130707610	(3089812)	C	MLT1J1	LTR/ERVL-MaLR	(18)	426	65	569805
395	23.1	0.1	0.0	chr10	130707688	130707776	(3089646)	C	MIR	SINE/MIR	(109)	159	66	569806
656	22.6	6.0	4.9	chr10	131066274	131066520	(2730902)	+	LTR35B	LTR/ERV1	270	519	(86)	570202
240	33.3	13.8	3.1	chr10	131738300	131738556	(2058866)	C	L2b	LINE/L2	(0)	3375	3087	570876
441	24.9	8.2	1.3	chr10	131738740	131738919	(2058503)	C	L1ME3A	LINE/L1	(38)	6204	5993	570877
323	31.1	10.3	2.9	chr10	132035998	132036125	(1761297)	+	ERVL-E-int	LTR/ERVL	3970	4102	(1565)	571249
17	23.3	0.0	0.0	chr10	132036428	132036472	(1760950)	+	(CGGCGCC)n	Simple_repeat	1	45	(0)	571258
15	10.3	0.0	5.7	chr10	132198552	132198586	(1598836)	+	(CTGGCC)n	Simple_repeat	1	35	(0)	571413
593	11.1	0.0	4.8	chr10	132335431	132335534	(1461888)	C	LTR71B	LTR/ERV1	(150)	460	362	571548
624	7.9	0.0	4.7	chr10	132335531	132335636	(1461786)	C	LTR71B	LTR/ERV1	(150)	460	360	571548
3047	7.7	3.7	0.0	chr10	132335634	132336072	(1461350)	C	LTR71B	LTR/ERV1	(154)	456	1	571549
464	11.2	4.9	2.5	chr11	316555	316634	(134769988)	+	AluSz6	SINE/Alu	208	289	(23)	573240
409	21.7	4.2	2.5	chr11	316661	316778	(134769844)	C	LTR8A	LTR/ERV1	(263)	464	345	573241
4421	9.9	2.8	0.7	chr11	329237	329833	(134756789)	+	LTR71B	LTR/ERV1	1	610	(0)	573257
18	7.8	4.3	6.2	chr11	695547	695592	(134391030)	+	(GCCGA)n	Simple_repeat	1	48	(0)	573782
18	6.2	2.5	7.3	chr11	747424	747463	(134339159)	+	(GCC)n	Simple_repeat	1	41	(0)	573885
16	11.7	0.0	0.0	chr11	810012	810039	(134276583)	+	(CCG)n	Simple_repeat	1	28	(0)	573972
1529	17.1	6.5	0.7	chr11	813100	813373	(134273249)	+	AluJr4	SINE/Alu	1	291	(21)	573977
1388	15.9	1.7	15.4	chr11	816632	816838	(134269784)	C	AluJr	SINE/Alu	(15)	297	127	573983
14	16.4	2.9	0.0	chr11	842514	842547	(134244075)	+	(CGGCC)n	Simple_repeat	1	35	(0)	574012
17	24.1	1.6	3.2	chr11	910821	910882	(134175740)	+	(CGCGCCG)n	Simple_repeat	1	63	(0)	574078
12	19.6	0.0	8.3	chr11	910881	910928	(134175694)	+	(GCTGG)n	Simple_repeat	1	48	(0)	574079
36	0.0	2.7	0.0	chr11	910938	910974	(134175648)	+	(CGGGGC)n	Simple_repeat	1	38	(0)	574080
1424	20.6	2.4	7.0	chr11	919097	919201	(134167421)	+	MLT1B	LTR/ERVL-MaLR	274	378	(12)	574096
501	26.9	2.1	0.0	chr11	919228	919368	(134167254)	C	MLT1J	LTR/ERVL-MaLR	(365)	147	4	574099
22	13.2	10.3	1.3	chr11	925798	925865	(134160757)	+	(CGTG)n	Simple_repeat	1	75	(0)	574110
37	26.7	3.7	5.3	chr11	926095	926311	(134160311)	+	G-rich	Low_complexity	1	225	(0)	574111
251	25.0	4.0	1.4	chr11	1308638	1308710	(133777912)	C	MIR3	SINE/MIR	(15)	193	119	574451
13	25.9	3.4	3.3	chr11	2270169	2270228	(132816394)	+	(CGC)n	Simple_repeat	1	60	(0)	575608
384	25.2	7.3	0.8	chr11	2329499	2329626	(132756996)	+	MLT1J2-int	LTR/ERVL-MaLR	1167	1303	(84)	575683
486	22.6	3.6	7.0	chr11	2329669	2329811	(132756811)	+	MLT1J2	LTR/ERVL-MaLR	21	158	(290)	575683
587	23.1	5.8	0.0	chr11	2329958	2330104	(132756518)	+	MER5A	DNA/hAT-Charlie	8	163	(26)	575684
19	11.2	5.8	3.6	chr11	2885520	2885571	(132201051)	+	GA-rich	Low_complexity	1	55	(0)	576274
28	5.8	0.0	0.0	chr11	2929454	2929489	(132157133)	+	(GCCCC)n	Simple_repeat	1	36	(0)	576321
1302	25.8	11.3	6.6	chr11	3380403	3380764	(131705858)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	162	576930
2637	9.9	0.0	0.3	chr11	3380765	3381120	(131705502)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	576931
1302	25.8	11.3	6.6	chr11	3381121	3381271	(131705351)	C	MLT1H	LTR/ERVL-MaLR	(388)	161	9	576930
237	30.3	12.2	0.9	chr11	3590039	3590166	(131496456)	+	MIR3	SINE/MIR	43	196	(34)	577266
241	25.7	2.1	0.3	chr11	3590218	3590343	(131496279)	+	L1M5	LINE/L1	2424	2552	(3594)	577267
431	17.8	1.1	3.2	chr11	3590386	3590478	(131496144)	+	MLT1J1	LTR/ERVL-MaLR	44	134	(310)	577268
380	31.4	16.6	4.1	chr11	8169152	8169668	(126916954)	+	L2	LINE/L2	2483	3077	(342)	583593
13	15.8	2.7	2.6	chr11	8682939	8682975	(126403647)	+	G-rich	Low_complexity	1	38	(0)	584338
31	0.0	0.0	0.0	chr11	9004116	9004144	(126082478)	+	(CGCGTCC)n	Simple_repeat	1	29	(0)	584871
11	20.5	5.1	0.0	chr11	9461144	9461182	(125625440)	+	(CGGCTC)n	Simple_repeat	1	41	(0)	585847
15	22.6	1.8	3.6	chr11	9574516	9574580	(125512042)	+	(GCGCCCG)n	Simple_repeat	1	63	(0)	586108
841	21.7	4.6	1.0	chr11	10729275	10729483	(124357139)	C	LTR67B	LTR/ERVL	(390)	230	14	588022
337	33.5	11.1	1.8	chr11	10907738	10908065	(124178557)	C	L2c	LINE/L2	(580)	2839	2478	588353
2326	16.8	4.1	2.2	chr11	10908371	10908479	(124178143)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	364	588356
477	31.0	8.6	0.7	chr11	10984411	10984729	(124101893)	+	MLT1J	LTR/ERVL-MaLR	62	418	(30)	588470
313	26.0	1.3	0.0	chr11	11589963	11590039	(123496583)	+	MIRb	SINE/MIR	22	99	(169)	589438
231	18.6	2.3	0.0	chr11	11590044	11590086	(123496536)	+	MamRep1894	DNA/hAT	2	45	(78)	589439
802	27.1	12.6	1.6	chr11	11590087	11590453	(123496169)	+	MLT1J2	LTR/ERVL-MaLR	1	413	(35)	589440
21	6.6	0.0	0.0	chr11	13962709	13962740	(121123882)	+	(GCTCA)n	Simple_repeat	1	32	(0)	593101
17	9.4	2.8	2.7	chr11	13962952	13962987	(121123635)	+	(GCTGGC)n	Simple_repeat	1	37	(0)	593102
13	30.2	0.0	6.9	chr11	14644665	14644751	(120441871)	+	(TGGTGC)n	Simple_repeat	1	87	(0)	594298
14	24.0	0.0	0.0	chr11	14891684	14891722	(120194900)	+	(GGAGCA)n	Simple_repeat	1	39	(0)	594637
385	20.6	2.1	1.1	chr11	15074580	15074672	(120011950)	C	MIR3	SINE/MIR	(70)	138	45	594897
14	21.5	2.2	2.2	chr11	17353526	17353570	(117733052)	+	G-rich	Low_complexity	1	46	(0)	598618
13	0.0	0.0	0.0	chr11	17353714	17353730	(117732892)	+	(GCA)n	Simple_repeat	1	17	(0)	598619
342	10.8	27.9	0.0	chr11	17644468	17644578	(117442044)	C	L2a	LINE/L2	(14)	3412	3259	599091
606	17.4	2.9	0.8	chr11	17644597	17644729	(117441893)	C	Arthur1C	DNA/hAT-Tip100	(15)	348	213	599092
1170	26.8	5.5	4.9	chr11	17704055	17704260	(117382362)	C	MLT1J	LTR/ERVL-MaLR	(216)	296	89	599180
1835	19.6	3.3	1.6	chr11	17704261	17704643	(117381979)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	599182
322	33.6	0.8	0.0	chr11	20544867	20544994	(114541628)	C	MER126	DNA	(175)	274	146	604112
11	29.5	1.6	3.2	chr11	25251416	25251476	(109835146)	+	(AATTAT)n	Simple_repeat	1	62	(0)	610817
452	29.1	0.7	0.0	chr11	25251560	25251693	(109834929)	+	MLT1J	LTR/ERVL-MaLR	78	212	(300)	610818
12	9.4	11.8	0.0	chr11	25251806	25251839	(109834783)	+	(TGT)n	Simple_repeat	1	38	(0)	610819
12	17.7	3.1	0.0	chr11	27363015	27363046	(107723576)	+	(GCGGCA)n	Simple_repeat	1	33	(0)	613839
236	22.1	25.7	1.9	chr11	30257197	30257302	(104829320)	C	LTR33B	LTR/ERVL	(278)	225	86	618197
1636	20.7	3.6	9.7	chr11	30257395	30257965	(104828657)	+	MER41B	LTR/ERV1	1	596	(38)	618198
1007	22.7	16.1	3.1	chr11	32043723	32044072	(103042550)	C	MLT1J	LTR/ERVL-MaLR	(108)	404	1	620886
22086	12.0	4.9	1.6	chr11	32750170	32751856	(102334766)	C	L1MA3	LINE/L1	(5777)	1788	23	622140
12	16.5	5.9	0.0	chr11	32892771	32892804	(102193818)	+	(GGCGG)n	Simple_repeat	1	36	(0)	622439
606	25.0	8.0	1.2	chr11	33508127	33508288	(101578334)	C	LTR67B	LTR/ERVL	(446)	174	1	623645
20	11.7	6.6	4.6	chr11	33700965	33701025	(101385597)	+	(GCCTC)n	Simple_repeat	1	65	(0)	623925
309	36.1	4.2	1.7	chr11	36289123	36289309	(98797313)	C	MIR3	SINE/MIR	(46)	222	19	628185
998	24.3	11.5	3.8	chr11	36333925	36334292	(98752330)	C	MLT1J	LTR/ERVL-MaLR	(111)	401	2	628270
269	32.4	3.3	4.6	chr11	36334310	36334461	(98752161)	+	L2c	LINE/L2	2803	2952	(467)	628268
224	29.6	15.8	7.7	chr11	36334544	36334843	(98751779)	+	L2c	LINE/L2	3059	3387	(0)	628268
430	24.2	3.5	11.0	chr11	42727916	42728136	(92358486)	+	MLT1J	LTR/ERVL-MaLR	1	263	(347)	637343
36	16.4	1.1	4.4	chr11	43547957	43548045	(91538577)	+	G-rich	Low_complexity	1	90	(0)	638644
12	19.4	4.7	2.2	chr11	43579413	43579455	(91507167)	+	G-rich	Low_complexity	1	45	(0)	638677
12	14.8	7.5	2.3	chr11	43579542	43579581	(91507041)	+	(GGTC)n	Simple_repeat	1	43	(0)	638678
1068	26.9	6.7	0.9	chr11	44372998	44373335	(90713287)	C	MLT1J	LTR/ERVL-MaLR	(153)	359	1	640001
1081	26.5	10.4	4.0	chr11	45095492	45095920	(89990702)	+	MLT1J	LTR/ERVL-MaLR	1	460	(52)	641491
22	21.3	3.3	5.4	chr11	45180659	45180748	(89905874)	+	G-rich	Low_complexity	1	93	(0)	641656
579	26.1	8.0	2.7	chr11	45267019	45267242	(89819380)	C	MIR	SINE/MIR	(24)	238	2	641785
250	30.8	7.1	0.0	chr11	45267408	45267511	(89819111)	C	MER5A	DNA/hAT-Charlie	(6)	183	72	641786
829	24.2	10.3	4.8	chr11	45646705	45647056	(89439566)	+	MLT1J	LTR/ERVL-MaLR	71	440	(72)	642526
4053	15.1	2.9	0.8	chr11	45647062	45647782	(89438840)	+	L1MB3	LINE/L1	5444	6179	(4)	642527
1499	21.1	2.7	5.1	chr11	45801452	45801825	(89284797)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	642805
724	28.6	9.2	3.7	chr11	45801826	45801984	(89284638)	C	MLT1J	LTR/ERVL-MaLR	(338)	174	2	642804
228	17.7	16.0	3.7	chr11	45801992	45802073	(89284549)	C	L2	LINE/L2	(2067)	1352	1259	642806
2204	7.7	0.0	0.0	chr11	46246222	46246507	(88840115)	C	L1PB1	LINE/L1	(0)	6151	5866	643588
14	22.9	1.6	4.7	chr11	46246508	46246522	(88840100)	+	(TTTCTCA)n	Simple_repeat	3	18	(0)	643589
244	14.9	0.0	2.1	chr11	46246685	46246732	(88839890)	+	MER94B	DNA/hAT-Blackjack	85	131	(2)	643590
304	24.4	2.4	0.0	chr11	46246825	46246906	(88839716)	+	UCON81	DNA/hAT-Charlie	1	84	(0)	643591
532	33.2	5.6	1.9	chr11	46249524	46249848	(88836774)	+	MLT1J	LTR/ERVL-MaLR	1	338	(174)	643597
13	20.9	0.0	4.8	chr11	47269595	47269636	(87816986)	+	(GCGCC)n	Simple_repeat	1	42	(0)	645590
193	29.4	5.5	0.0	chr11	47426755	47426822	(87659800)	+	L3	LINE/CR1	3457	3528	(571)	645875
12	19.3	0.0	5.1	chr11	47565815	47565853	(87520769)	+	(CCCCGT)n	Simple_repeat	1	39	(0)	646186
17	22.2	0.0	0.0	chr11	47767169	47767210	(87319412)	+	(GTCCGG)n	Simple_repeat	1	42	(0)	646695
1278	24.5	13.9	2.8	chr11	47955126	47955515	(87131107)	C	MLT1J1	LTR/ERVL-MaLR	(0)	444	5	647203
685	29.3	8.8	0.5	chr11	47955537	47955745	(87130877)	C	MIRb	SINE/MIR	(40)	228	1	647204
15	0.0	0.0	0.0	chr11	59174446	59174462	(75912160)	+	(AG)n	Simple_repeat	1	17	(0)	656443
656	1.4	0.0	0.0	chr11	59560335	59560407	(75526215)	C	tRNA-Lys-AAA	tRNA	(3)	73	1	656970
1369	26.8	7.7	5.3	chr11	59780032	59780162	(75306460)	+	LTR33A	LTR/ERVL	3	132	(388)	657437
1633	16.1	10.1	2.4	chr11	59780163	59780498	(75306124)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	657438
240	29.2	0.0	1.5	chr11	60906807	60906872	(74179750)	C	MER5A	DNA/hAT-Charlie	(3)	186	122	659082
11	27.6	0.0	0.0	chr11	61429967	61430005	(73656617)	+	(CCGCCCC)n	Simple_repeat	1	39	(0)	660145
19	18.5	5.5	0.0	chr11	61955654	61955708	(73130914)	+	(CTGGCCC)n	Simple_repeat	1	58	(0)	661170
24	13.4	4.1	0.0	chr11	61967443	61967491	(73119131)	+	(GGC)n	Simple_repeat	1	51	(0)	661187
2330	8.4	0.3	0.3	chr11	62336902	62337198	(72749424)	C	AluSp	SINE/Alu	(16)	297	1	661866
2392	9.9	0.0	0.0	chr11	62606575	62606876	(72479746)	+	AluSx	SINE/Alu	1	302	(10)	662393
835	9.8	0.0	0.0	chr11	62607166	62607277	(72479345)	+	AluSx	SINE/Alu	1	112	(200)	662394
18	8.7	7.4	5.2	chr11	62653254	62653307	(72433315)	+	(GAGCGC)n	Simple_repeat	1	58	(0)	662481
1365	9.9	0.0	6.1	chr11	62841342	62841418	(72245204)	+	AluSc8	SINE/Alu	131	199	(112)	662920
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
13	18.7	0.0	5.0	chr11	62855797	62855836	(72230786)	+	A-rich	Low_complexity	1	40	(0)	662962
13	17.4	4.9	2.3	chr11	62881265	62881305	(72205317)	+	(GCTCG)n	Simple_repeat	1	43	(0)	663030
18	10.4	0.0	0.0	chr11	63613963	63613993	(71472629)	+	(CCCCG)n	Simple_repeat	1	31	(0)	664006
20	8.1	2.3	4.5	chr11	63671527	63671569	(71415053)	+	(CGAGG)n	Simple_repeat	1	44	(0)	664137
23	14.9	2.2	0.0	chr11	63763731	63763775	(71322847)	+	(CGG)n	Simple_repeat	1	46	(0)	664333
27	23.1	3.4	2.2	chr11	63764004	63764092	(71322530)	+	(CTC)n	Simple_repeat	1	92	(0)	664334
12	30.1	0.0	3.6	chr11	63768737	63768792	(71317830)	+	(GGCC)n	Simple_repeat	1	56	(0)	664341
380	29.6	14.5	3.3	chr11	63919998	63920210	(71166412)	+	L2b	LINE/L2	3135	3375	(0)	664649
13	23.0	4.5	4.3	chr11	64082870	64082935	(71003687)	+	(CCTGC)n	Simple_repeat	1	69	(0)	664973
647	28.6	2.7	8.4	chr11	64082954	64083154	(71003468)	C	MIRb	SINE/MIR	(8)	260	73	664974
1927	14.3	0.3	4.5	chr11	64083155	64083468	(71003154)	+	AluSx1	SINE/Alu	2	302	(10)	664975
13	11.6	4.9	4.7	chr11	64185451	64185491	(70901131)	+	(GCCGGAG)n	Simple_repeat	1	43	(0)	665142
210	25.6	3.2	10.0	chr11	64269299	64269398	(70817224)	+	L2a	LINE/L2	3290	3421	(5)	665281
931	13.4	0.0	0.0	chr11	64270649	64270782	(70815840)	+	FRAM	SINE/Alu	1	134	(42)	665282
37	0.0	0.0	0.0	chr11	64270901	64270932	(70815690)	+	(AC)n	Simple_repeat	1	32	(0)	665283
44	0.0	0.0	0.0	chr11	64270976	64271013	(70815609)	+	(AC)n	Simple_repeat	1	38	(0)	665283
33	0.0	0.0	0.0	chr11	64271061	64271088	(70815534)	+	(AC)n	Simple_repeat	1	28	(0)	665283
31	0.0	0.0	0.0	chr11	64271137	64271163	(70815459)	+	(CA)n	Simple_repeat	1	27	(0)	665284
48	0.0	0.0	0.0	chr11	64271208	64271248	(70815374)	+	(CA)n	Simple_repeat	1	41	(0)	665284
46	0.0	0.0	0.0	chr11	64271297	64271335	(70815287)	+	(CA)n	Simple_repeat	1	39	(0)	665284
29	0.0	0.0	0.0	chr11	64271382	64271406	(70815216)	+	(CA)n	Simple_repeat	1	25	(0)	665284
11	23.1	3.2	6.2	chr11	64285814	64285831	(70800791)	+	(CGGAGC)n	Simple_repeat	1	63	(0)	665323
12	18.1	0.0	7.0	chr11	64285832	64285874	(70800748)	+	G-rich	Low_complexity	1	43	(0)	665324
1055	19.6	0.0	3.1	chr11	64444729	64444923	(70641699)	C	AluJb	SINE/Alu	(122)	190	2	665636
528	22.9	9.1	8.3	chr11	64444925	64445284	(70641338)	+	MLT1J1	LTR/ERVL-MaLR	29	448	(0)	665633
431	31.0	7.0	2.0	chr11	64688952	64689169	(70397453)	+	MIRc	SINE/MIR	22	249	(19)	666045
186	21.7	8.0	0.0	chr11	64802699	64802744	(70283878)	+	MIR	SINE/MIR	116	165	(97)	666236
14	27.3	0.0	0.0	chr11	64802945	64802988	(70283634)	+	G-rich	Low_complexity	1	44	(0)	666237
194	33.3	0.0	0.0	chr11	64845222	64845284	(70241338)	C	MIRc	SINE/MIR	(94)	174	112	666323
279	28.2	15.5	2.1	chr11	65003567	65003711	(70082911)	C	MIR3	SINE/MIR	(20)	188	21	666637
272	31.3	5.5	1.8	chr11	65003890	65004032	(70082590)	+	MIR3	SINE/MIR	19	161	(47)	666638
2004	13.6	0.0	2.0	chr11	65004037	65004144	(70082478)	+	AluJb	SINE/Alu	12	119	(193)	666639
15	14.7	0.0	0.0	chr11	65041184	65041213	(70045409)	+	(GCCCC)n	Simple_repeat	1	30	(0)	666738
390	15.0	0.0	0.0	chr11	65477747	65477806	(69608816)	+	AluJo	SINE/Alu	74	133	(179)	667619
46	22.5	3.3	3.8	chr11	65720954	65721105	(69365517)	+	(TTCC)n	Simple_repeat	1	157	(0)	668057
26	0.0	0.0	0.0	chr11	65833561	65833585	(69253037)	+	(CTTCCC)n	Simple_repeat	1	25	(0)	668265
1991	12.7	0.0	2.4	chr11	65893517	65893807	(69192815)	+	AluSz6	SINE/Alu	9	292	(20)	668362
12	23.1	2.3	2.3	chr11	66052068	66052110	(69034512)	+	(GCCC)n	Simple_repeat	1	44	(0)	668735
13	11.6	3.6	0.0	chr11	66052619	66052646	(69033976)	+	(GGCCT)n	Simple_repeat	1	29	(0)	668736
13	14.8	0.0	3.1	chr11	66257792	66257823	(68828799)	+	G-rich	Low_complexity	1	32	(0)	669136
236	25.0	9.3	4.3	chr11	66268242	66268333	(68818289)	C	MIRc	SINE/MIR	(55)	213	117	669149
946	9.4	0.0	0.0	chr11	66439269	66439385	(68647237)	+	AluJo	SINE/Alu	2	118	(194)	669515
401	17.5	0.0	0.0	chr11	66439389	66439451	(68647171)	+	FRAM	SINE/Alu	50	112	(64)	669516
428	21.6	17.3	2.6	chr11	66439452	66439603	(68647019)	+	MIR	SINE/MIR	84	262	(0)	669511
18	21.9	0.0	0.0	chr11	66843351	66843393	(68243229)	+	G-rich	Low_complexity	1	43	(0)	670370
334	34.8	15.6	2.9	chr11	66886197	66886850	(68199772)	C	L2	LINE/L2	(337)	3082	2331	670420
13	20.8	8.0	0.0	chr11	67290004	67290053	(67796569)	+	(CCCTG)n	Simple_repeat	1	54	(0)	671354
203	24.6	4.2	4.2	chr11	67391620	67391691	(67694931)	C	MIRc	SINE/MIR	(184)	84	13	671564
13	21.7	2.6	0.0	chr11	67391937	67391974	(67694648)	+	G-rich	Low_complexity	1	39	(0)	671565
181	21.4	8.7	9.7	chr11	67483484	67483576	(67603046)	+	AmnSINE1	SINE/5S-Deu-L2	33	124	(451)	671731
226	30.3	0.0	0.0	chr11	67507869	67507934	(67578688)	C	MIRc	SINE/MIR	(120)	148	83	671763
12	25.5	0.0	0.0	chr11	67606676	67606712	(67479910)	+	(GAGC)n	Simple_repeat	1	37	(0)	671985
196	36.5	7.7	0.0	chr11	68904164	68904319	(66182303)	C	L3	LINE/CR1	(98)	4001	3833	674192
4495	13.7	26.2	1.1	chr11	68973871	68974805	(66111817)	C	LTR12D	LTR/ERV1	(0)	1254	1	674325
901	24.8	17.8	2.2	chr11	68974806	68974982	(66111640)	+	MLT1J2	LTR/ERVL-MaLR	61	288	(160)	674326
703	22.8	1.2	3.4	chr11	69172736	69172912	(65913710)	C	LTR33A	LTR/ERVL	(299)	221	49	674637
481	26.5	7.8	6.5	chr11	69172932	69173145	(65913477)	+	L2a	LINE/L2	3080	3296	(130)	674638
822	25.4	3.9	2.0	chr11	69630122	69630370	(65456252)	C	MLT1J	LTR/ERVL-MaLR	(257)	255	2	675414
13	22.1	2.3	2.2	chr11	69638351	69638394	(65448228)	+	(CCCCCAG)n	Simple_repeat	1	45	(0)	675425
18	17.6	5.9	0.0	chr11	69703576	69703626	(65382996)	+	G-rich	Low_complexity	1	54	(0)	675533
1259	30.2	6.9	0.0	chr11	69799576	69800019	(65286603)	+	MLT1J	LTR/ERVL-MaLR	27	503	(9)	675741
12	21.7	0.0	0.0	chr11	70398462	70398493	(64688129)	+	G-rich	Low_complexity	1	32	(0)	676805
11	27.7	0.0	0.0	chr11	70398499	70398537	(64688085)	+	(GGACCC)n	Simple_repeat	1	39	(0)	676806
429	24.5	5.5	1.8	chr11	70699827	70700016	(64386606)	+	MLT1J	LTR/ERVL-MaLR	64	264	(184)	677233
404	30.5	6.6	0.0	chr11	71333240	71333367	(63753255)	C	LTR67B	LTR/ERVL	(202)	418	282	678077
567	19.5	4.5	10.8	chr11	71333431	71333597	(63753025)	C	LTR67B	LTR/ERVL	(453)	167	12	678077
453	34.7	3.6	7.4	chr11	71333721	71333978	(63752644)	+	MIRb	SINE/MIR	5	252	(16)	678078
556	27.9	18.2	4.5	chr11	71629928	71630309	(63456313)	C	MLT1J2	LTR/ERVL-MaLR	(2)	446	1	678522
561	29.0	8.2	5.0	chr11	71630310	71630443	(63456179)	C	L1M5	LINE/L1	(3589)	2557	2424	678521
20	28.3	1.2	3.5	chr11	71929056	71929062	(63157560)	+	(GTGGAG)n	Simple_repeat	1	12	(75)	678991
15	22.5	0.0	2.3	chr11	71929063	71929105	(63157517)	+	(TGG)n	Simple_repeat	1	43	(0)	678992
20	28.3	1.2	3.5	chr11	71929106	71929141	(63157481)	+	(GTGGAG)n	Simple_repeat	13	87	(0)	678991
2527	6.9	0.0	0.0	chr11	72434808	72435110	(62651512)	C	AluSx1	SINE/Alu	(9)	303	1	679951
540	33.6	11.2	2.1	chr11	72668223	72668456	(62418166)	+	MIRc	SINE/MIR	10	267	(1)	680378
14	29.5	0.0	4.5	chr11	73598110	73598176	(61488446)	+	G-rich	Low_complexity	1	67	(0)	682198
15	0.0	0.0	0.0	chr11	73598495	73598511	(61488111)	+	(CA)n	Simple_repeat	1	17	(0)	682199
39	0.0	0.0	0.0	chr11	73598518	73598553	(61488069)	+	(TCTCTCCC)n	Simple_repeat	1	36	(0)	682200
206	25.9	13.8	1.2	chr11	73788257	73788338	(61298284)	+	MIR3	SINE/MIR	15	108	(100)	682676
13	0.0	0.0	0.0	chr11	73931558	73931574	(61155048)	+	(GCA)n	Simple_repeat	1	17	(0)	683062
191	15.6	0.0	0.0	chr11	73951054	73951085	(61135537)	C	OldhAT1	DNA/hAT-Ac	(243)	2605	2574	683093
15	22.6	3.3	3.2	chr11	74493319	74493378	(60593244)	+	(GCACGC)n	Simple_repeat	1	62	(0)	684201
206	37.4	8.7	0.0	chr11	75399208	75399354	(59687268)	+	MIR3	SINE/MIR	33	193	(15)	685980
17	10.8	4.4	4.3	chr11	75583798	75583842	(59502780)	+	G-rich	Low_complexity	1	47	(0)	686391
16	27.2	1.5	3.0	chr11	76380912	76380976	(58705646)	+	G-rich	Low_complexity	1	66	(0)	687899
14	30.3	0.0	1.9	chr11	76381067	76381120	(58705502)	+	(CCG)n	Simple_repeat	1	54	(0)	687900
12	17.6	4.0	5.8	chr11	77040151	77040200	(58046422)	+	(GCACGCT)n	Simple_repeat	1	52	(0)	689144
17	8.3	0.0	0.0	chr11	77820687	77820712	(57265910)	+	(CCG)n	Simple_repeat	1	26	(0)	690659
268	25.7	12.7	1.2	chr11	78139218	78139324	(56947298)	C	MIRc	SINE/MIR	(104)	164	39	691441
30	3.4	0.0	0.0	chr11	79440853	79440882	(55645740)	+	(GT)n	Simple_repeat	1	30	(0)	693943
15	12.2	0.0	0.0	chr11	79440908	79440934	(55645688)	+	(CCTG)n	Simple_repeat	1	27	(0)	693944
15	16.6	0.0	0.0	chr11	79440964	79440990	(55645632)	+	GA-rich	Low_complexity	1	27	(0)	693945
19	11.6	0.0	0.0	chr11	79440990	79441018	(55645604)	+	(AC)n	Simple_repeat	1	29	(0)	693946
308	27.3	1.1	1.1	chr11	85182909	85182997	(49903625)	C	MER135	DNA	(118)	110	22	703501
346	35.4	9.5	4.8	chr11	85628901	85629232	(49457390)	+	L2c	LINE/L2	3020	3368	(19)	704115
218	28.4	3.9	0.0	chr11	85854743	85854816	(49231806)	C	MIR3	SINE/MIR	(47)	161	85	704507
341	28.8	14.6	0.9	chr11	86301816	86302017	(48784605)	+	MIRb	SINE/MIR	16	257	(11)	705331
796	24.6	5.0	0.9	chr11	87968278	87968490	(47118132)	+	MLT1J	LTR/ERVL-MaLR	6	227	(285)	707907
788	27.6	0.5	0.0	chr11	87968574	87968769	(47117853)	+	Charlie10b	DNA/hAT-Charlie	1	197	(45)	707908
13	23.4	0.0	2.4	chr11	93661502	93661543	(41425079)	+	G-rich	Low_complexity	1	42	(0)	715958
15	20.5	0.0	2.4	chr11	94544397	94544437	(40542185)	+	(CAGCGG)n	Simple_repeat	1	41	(0)	717312
15	25.8	0.0	3.7	chr11	94544528	94544581	(40542041)	+	(CGG)n	Simple_repeat	1	54	(0)	717313
45941	10.3	2.1	2.0	chr11	94650510	94657040	(40429582)	+	HERV4_I-int	LTR/ERV1	1	6539	(0)	717469
12	25.1	3.2	4.7	chr11	95067557	95067618	(40019004)	+	(GGC)n	Simple_repeat	1	64	(0)	718067
12	14.6	0.0	5.9	chr11	95067931	95067964	(40018658)	+	(CTCGGT)n	Simple_repeat	1	34	(0)	718068
585	29.3	12.3	6.5	chr11	101757183	101757595	(33329027)	C	LTR33A	LTR/ERVL	(9)	511	72	726821
2627	12.1	8.4	1.5	chr11	101757700	101758161	(33328461)	C	LTR72B	LTR/ERV1	(0)	500	7	726822
203	24.1	9.8	5.7	chr11	112226856	112226943	(22859679)	+	MIRb	SINE/MIR	169	260	(8)	742778
267	29.2	21.9	3.8	chr11	116186866	116187050	(18899572)	+	MIRc	SINE/MIR	35	262	(0)	748836
529	33.2	2.7	5.7	chr11	116187141	116187235	(18899387)	+	MIRc	SINE/MIR	1	99	(169)	748837
1096	27.3	10.9	2.0	chr11	116187236	116187642	(18898980)	+	MLT1J2	LTR/ERVL-MaLR	1	448	(0)	748838
1336	26.9	7.2	4.1	chr11	116256936	116257420	(18829202)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	12	748980
1308	22.8	11.4	2.7	chr11	116658172	116658537	(18428085)	C	MLT1J2	LTR/ERVL-MaLR	(8)	440	39	749719
1495	22.5	15.8	1.0	chr11	116793651	116794050	(18292572)	C	MLT1J	LTR/ERVL-MaLR	(52)	460	1	749948
308	28.6	12.8	2.8	chr11	116794125	116794300	(18292322)	+	L2c	LINE/L2	3192	3387	(0)	749944
1099	6.8	0.0	0.0	chr11	117327469	117327601	(17759021)	C	AluSx	SINE/Alu	(179)	133	1	750972
343	22.9	14.5	2.3	chr11	118530369	118530520	(16556102)	+	MIRb	SINE/MIR	8	186	(82)	753063
21	10.0	4.4	2.1	chr11	119149186	119149247	(15937375)	+	(CCGGCC)n	Simple_repeat	1	63	(0)	754336
13	17.4	4.9	2.3	chr11	119168735	119168775	(15917847)	+	G-rich	Low_complexity	1	43	(0)	754377
248	18.3	6.2	3.2	chr11	119338670	119338731	(15747891)	C	MER91A	DNA/hAT-Tip100	(22)	174	111	754709
562	26.8	4.8	3.8	chr11	119518644	119518854	(15567768)	+	MIRb	SINE/MIR	43	254	(14)	755004
16	17.3	2.6	0.0	chr11	119518922	119518960	(15567662)	+	G-rich	Low_complexity	1	40	(0)	755005
20	21.6	0.0	3.5	chr11	119519188	119519221	(15567401)	+	(TGTGTG)n	Simple_repeat	1	58	(0)	755006
22	0.0	0.0	0.0	chr11	119519222	119519245	(15567377)	+	(TG)n	Simple_repeat	1	24	(0)	755007
213	25.9	17.6	3.6	chr11	120324915	120325026	(14761596)	+	L2b	LINE/L2	3268	3420	(6)	756367
20	25.3	0.0	0.0	chr11	120325238	120325300	(14761322)	+	(CCTCCG)n	Simple_repeat	1	63	(0)	756368
428	18.8	1.0	1.0	chr11	120842121	120842217	(14244405)	C	MLT1J1	LTR/ERVL-MaLR	(11)	433	337	757245
1032	18.3	1.5	0.5	chr11	120842316	120842507	(14244115)	C	MLT1J1	LTR/ERVL-MaLR	(250)	194	1	757245
1279	20.6	2.3	6.9	chr11	121391668	121391985	(13694637)	C	MLT1D	LTR/ERVL-MaLR	(198)	307	5	758031
345	24.9	3.0	1.2	chr11	121391989	121392107	(13694515)	+	MLT1J	LTR/ERVL-MaLR	63	187	(325)	758030
250	15.0	0.0	0.0	chr11	121392255	121392294	(13694328)	+	MLT1J	LTR/ERVL-MaLR	416	455	(57)	758032
1242	26.4	7.3	2.3	chr11	121843871	121844258	(13242364)	C	MLT1J	LTR/ERVL-MaLR	(7)	505	97	758688
444	34.3	9.6	0.0	chr11	121844291	121844459	(13242163)	+	MIRb	SINE/MIR	51	237	(31)	758689
24	22.5	5.0	4.8	chr11	123195648	123195769	(11890853)	+	(TTCCCTC)n	Simple_repeat	1	122	(0)	761048
18	17.5	3.6	3.5	chr11	123431170	123431224	(11655398)	+	(CGTCC)n	Simple_repeat	1	57	(0)	761531
31	20.8	0.0	0.0	chr11	123741468	123741535	(11345087)	+	(CCCGG)n	Simple_repeat	1	68	(0)	762084
211	25.5	3.5	1.8	chr11	126416476	126416531	(8670091)	C	MER5A	DNA/hAT-Charlie	(19)	170	114	766061
992	26.1	11.2	2.3	chr11	127056277	127056665	(8029957)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	21	766999
30	41.9	0.0	0.0	chr11	127056690	127056820	(8029802)	+	A-rich	Low_complexity	1	131	(0)	767000
367	23.6	10.8	5.2	chr11	128653609	128653782	(6432840)	+	L1M6	LINE/L1	14	198	(6298)	769192
905	29.7	12.9	4.3	chr11	128654163	128654412	(6432210)	+	L1M6	LINE/L1	807	1100	(5396)	769192
225	29.8	0.0	6.6	chr11	134469524	134469645	(616977)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	399	777277
562	28.1	9.7	2.9	chr11	134469733	134469904	(616718)	C	MLT1J	LTR/ERVL-MaLR	(228)	284	100	777277
1617	29.1	7.0	6.2	chr11	134470032	134470822	(615800)	C	MLT1J-int	LTR/ERVL-MaLR	(37)	1350	553	777277
209	26.9	2.9	1.5	chr12	98887	98954	(133176355)	C	L2b	LINE/L2	(210)	3165	3097	778218
12	20.2	2.9	0.0	chr12	99229	99262	(133176047)	+	(CCTT)n	Simple_repeat	1	35	(0)	778219
327	30.5	7.0	8.2	chr12	612301	612532	(132662777)	+	MLT1O	LTR/ERVL-MaLR	9	237	(305)	779074
15	19.9	0.0	0.0	chr12	751084	751112	(132524197)	+	A-rich	Low_complexity	1	29	(0)	779402
15	5.6	0.0	0.0	chr12	752206	752224	(132523085)	+	(T)n	Simple_repeat	1	19	(0)	779404
13	32.3	0.0	0.0	chr12	752225	752241	(132523068)	+	(TTC)n	Simple_repeat	10	42	(0)	779403
14	17.1	2.3	4.5	chr12	753230	753246	(132522063)	+	(CGC)n	Simple_repeat	1	42	(0)	779405
12	8.8	4.2	0.0	chr12	753247	753270	(132522039)	+	(CCGC)n	Simple_repeat	1	25	(0)	779406
713	28.7	10.5	4.8	chr12	1613703	1614123	(131661186)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	1	780957
28	26.6	2.8	2.7	chr12	1690996	1691104	(131584205)	+	(CGG)n	Simple_repeat	1	112	(0)	781100
17	15.7	0.0	2.6	chr12	1691119	1691157	(131584152)	+	(CCCCCTC)n	Simple_repeat	1	39	(0)	781101
381	23.1	4.2	0.0	chr12	1796021	1796111	(131479198)	C	MER94	DNA/hAT-Blackjack	(22)	112	18	781286
434	27.9	6.9	1.2	chr12	1796360	1796548	(131478761)	C	MIRb	SINE/MIR	(60)	202	4	781282
594	27.2	11.3	1.2	chr12	1804562	1804814	(131470495)	+	MLT1J	LTR/ERVL-MaLR	28	309	(203)	781294
2079	11.6	1.7	0.0	chr12	2783620	2783903	(130491406)	C	AluSx1	SINE/Alu	(23)	289	1	782649
273	34.5	0.7	1.9	chr12	2783990	2784111	(130491198)	+	L2c	LINE/L2	3226	3352	(35)	782637
19	4.5	0.0	0.0	chr12	2794792	2794814	(130480495)	+	(A)n	Simple_repeat	1	23	(0)	782669
21	26.1	2.5	2.4	chr12	2795036	2795116	(130480193)	+	(CCGCGC)n	Simple_repeat	1	83	(0)	782670
21	4.2	0.0	0.0	chr12	4164536	4164560	(129110749)	+	(T)n	Simple_repeat	1	25	(0)	785075
12	23.4	0.0	4.5	chr12	4203984	4204027	(129071282)	+	(TTATTTC)n	Simple_repeat	1	44	(0)	785156
11	21.5	6.0	1.9	chr12	4272316	4272365	(129002944)	+	(GCCCGC)n	Simple_repeat	1	53	(0)	785270
886	19.3	23.5	7.6	chr12	4320348	4320728	(128954581)	C	MER31B	LTR/ERV1	(0)	466	7	785341
1414	27.5	5.0	2.6	chr12	4786644	4787072	(128488237)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	9	786071
29	3.1	3.0	0.0	chr12	4787172	4787204	(128488105)	+	(TG)n	Simple_repeat	1	34	(0)	786072
236	28.1	2.4	7.6	chr12	5204686	5204789	(128070520)	C	L1MC4	LINE/L1	(1326)	6716	6615	786686
12	25.8	1.7	5.1	chr12	5204826	5204883	(128070426)	+	G-rich	Low_complexity	1	59	(0)	786688
472	27.7	8.7	8.7	chr12	5204910	5205318	(128069991)	+	MLT1J1	LTR/ERVL-MaLR	1	470	(42)	786689
410	29.2	1.4	5.3	chr12	6493551	6493702	(126781607)	C	MIRb	SINE/MIR	(82)	186	41	788828
198	6.7	0.0	3.2	chr12	6493681	6493711	(126781598)	+	Tigger19b	DNA/TcMar-Tigger	254	283	(267)	788829
14	22.2	2.3	2.2	chr12	7440325	7440368	(125834941)	+	(GCC)n	Simple_repeat	1	45	(0)	790385
3788	12.2	5.8	0.7	chr12	7588553	7589160	(125686149)	+	HERVP71A-int	LTR/ERV1	3	643	(6947)	790533
3219	9.2	3.7	0.5	chr12	9364148	9364592	(123910717)	C	LTR46	LTR/ERV1	(0)	460	1	793743
2283	18.2	8.8	2.8	chr12	9364593	9365057	(123910252)	C	MER101B	LTR/ERV1	(69)	501	3	793742
2541	31.5	8.7	2.3	chr12	11161387	11162583	(122112726)	+	MLT1J1-int	LTR/ERVL-MaLR	78	1358	(29)	796130
596	19.0	4.7	0.7	chr12	11162613	11162755	(122112554)	+	MLT1J1	LTR/ERVL-MaLR	1	149	(295)	796130
801	26.4	9.0	2.3	chr12	11496211	11496591	(121778718)	+	MLT1J	LTR/ERVL-MaLR	5	385	(63)	796557
14	22.7	2.0	3.9	chr12	11500684	11500733	(121774576)	+	(GCC)n	Simple_repeat	1	51	(0)	796566
13	6.6	8.8	2.7	chr12	11799124	11799157	(121476152)	+	GA-rich	Low_complexity	1	37	(0)	797021
13	20.0	0.0	2.8	chr12	12611924	12611959	(120663350)	+	GA-rich	Low_complexity	1	36	(0)	798443
537	25.5	4.6	7.3	chr12	12764828	12765005	(120510304)	C	MLT1O	LTR/ERVL-MaLR	(11)	437	265	798738
562	17.7	1.0	0.0	chr12	12765107	12765202	(120510107)	C	MSTB1	LTR/ERVL-MaLR	(81)	351	255	798739
825	15.2	0.0	0.0	chr12	12765234	12765351	(120509958)	C	FLAM_A	SINE/Alu	(24)	118	1	798740
270	21.8	4.4	4.4	chr12	12791855	12791945	(120483364)	C	MLT1J	LTR/ERVL-MaLR	(384)	128	38	798784
1451	25.2	6.7	2.8	chr12	12791977	12792438	(120482871)	+	MamRep1527	LTR	487	967	(2)	798785
300	22.6	5.1	4.1	chr12	13044135	13044231	(120231078)	C	MIRb	SINE/MIR	(69)	199	102	799300
18	0.0	4.0	0.0	chr12	19130684	19130708	(114144601)	+	(AGG)n	Simple_repeat	1	26	(0)	807588
14	28.6	3.1	1.5	chr12	22046170	22046234	(111229075)	+	G-rich	Low_complexity	1	67	(0)	811566
12	10.0	5.6	5.3	chr12	22544213	22544248	(110731061)	+	G-rich	Low_complexity	1	38	(0)	812278
16	13.3	2.7	5.3	chr12	22544266	22544302	(110731007)	+	(GC)n	Simple_repeat	1	38	(0)	812279
19	22.1	5.1	3.6	chr12	25386118	25386196	(107889113)	+	(CGC)n	Simple_repeat	1	83	(0)	816427
15	6.3	5.4	5.1	chr12	25958492	25958540	(107316769)	+	(GGCGCG)n	Simple_repeat	1	49	(0)	817285
30	0.0	0.0	0.0	chr12	25958634	25958662	(107316647)	+	(GCCCG)n	Simple_repeat	1	29	(0)	817286
189	20.8	4.0	0.0	chr12	26832755	26832802	(106442507)	+	Tigger19b	DNA/TcMar-Tigger	320	369	(181)	818544
12	8.9	4.2	0.0	chr12	26833030	26833053	(106442256)	+	(GCC)n	Simple_repeat	1	25	(0)	818545
14	0.0	0.0	0.0	chr12	31590854	31590871	(101684438)	+	(GCC)n	Simple_repeat	1	18	(0)	825570
17	0.0	0.0	0.0	chr12	31658927	31658945	(101616364)	+	(T)n	Simple_repeat	1	19	(0)	825744
322	21.3	3.2	2.3	chr12	31658952	31659037	(101616272)	+	L2a	LINE/L2	3281	3404	(22)	825745
13	11.2	3.2	3.1	chr12	32679264	32679294	(100596015)	+	GA-rich	Low_complexity	1	32	(0)	827925
16	23.9	0.0	0.0	chr12	32679526	32679569	(100595740)	+	(GCGCCC)n	Simple_repeat	1	44	(0)	827926
603	29.4	9.8	10.9	chr12	33662629	33663261	(99612048)	C	MLT2E	LTR/ERVL	(3)	625	1	829307
530	33.4	9.0	7.0	chr12	33663283	33663936	(99611373)	C	L1M5	LINE/L1	(2390)	3756	3089	829308
6708	14.2	3.4	2.2	chr12	39033769	39034028	(94241281)	+	Tigger3b	DNA/TcMar-Tigger	965	1231	(0)	831851
348	15.5	1.7	0.0	chr12	39034049	39034106	(94241203)	+	MLT2F	LTR/ERVL	1	59	(604)	831853
413	13.1	12.5	2.3	chr12	39034154	39034239	(94241070)	+	MLT2F	LTR/ERVL	465	560	(3)	831853
19	12.8	2.9	0.0	chr12	44877134	44877167	(88398142)	+	GA-rich	Low_complexity	1	35	(0)	840017
12	9.7	0.0	0.0	chr12	44877167	44877188	(88398121)	+	(AAAT)n	Simple_repeat	1	22	(0)	840018
588	21.3	5.3	6.9	chr12	46244354	46244499	(87030810)	+	LTR67B	LTR/ERVL	12	149	(471)	842018
691	30.9	3.5	0.4	chr12	46244589	46244864	(87030445)	+	LTR67B	LTR/ERVL	334	618	(2)	842018
189	31.3	0.0	3.5	chr12	47759604	47759689	(85515620)	+	MIR1_Amn	SINE/MIR	67	149	(81)	844154
673	26.9	13.1	5.8	chr12	47768932	47769251	(85506058)	C	MLT1J2	LTR/ERVL-MaLR	(74)	374	23	844167
16	13.2	0.0	0.0	chr12	48998772	48998805	(84276504)	+	(GT)n	Simple_repeat	1	34	(0)	846236
12	27.7	0.0	0.0	chr12	49336438	49336476	(83938833)	+	(GCA)n	Simple_repeat	1	39	(0)	846987
22	21.4	1.3	6.2	chr12	49367401	49367479	(83907830)	+	(GGC)n	Simple_repeat	1	80	(0)	847046
1833	15.1	1.0	2.3	chr12	52139142	52139446	(81135863)	C	AluSz	SINE/Alu	(11)	301	1	852501
652	31.1	5.3	3.2	chr12	52141447	52141647	(81133662)	+	L2a	LINE/L2	3053	3266	(160)	852506
486	24.1	22.2	0.0	chr12	52141648	52141784	(81133525)	C	MER45A	DNA/hAT-Tip100	(1)	177	2	852507
300	29.2	14.4	4.3	chr12	52903183	52903368	(80371941)	C	MIRb	SINE/MIR	(32)	236	29	853626
355	35.2	9.3	0.8	chr12	53727786	53728020	(79547289)	C	MIRc	SINE/MIR	(8)	260	4	855348
39	2.6	0.0	0.0	chr12	55743401	55743440	(77531869)	+	(GCG)n	Simple_repeat	1	40	(0)	858163
20	24.6	6.0	1.1	chr12	56104552	56104639	(77170670)	+	(CTCG)n	Simple_repeat	1	92	(0)	858918
90	1.2	0.0	1.1	chr12	56116142	56116229	(77159080)	+	(AAAG)n	Simple_repeat	1	88	(0)	858936
13	23.1	0.0	0.0	chr12	56152593	56152628	(77122681)	+	(CCCCGC)n	Simple_repeat	1	36	(0)	858986
34	0.0	0.0	2.9	chr12	56152690	56152723	(77122586)	+	(GT)n	Simple_repeat	1	34	(0)	858987
15	0.0	0.0	4.3	chr12	56266850	56266872	(77008437)	+	(CCTT)n	Simple_repeat	1	23	(0)	859192
2113	9.5	4.1	0.0	chr12	56316550	56316832	(76958477)	C	AluSg7	SINE/Alu	(14)	295	1	859298
2293	11.0	0.0	0.0	chr12	57487567	57487874	(75787435)	+	AluSx	SINE/Alu	1	308	(4)	861402
12	11.7	10.8	0.0	chr12	57488401	57488437	(75786872)	+	(CTTCCCT)n	Simple_repeat	1	41	(0)	861403
16	17.6	0.0	0.0	chr12	57488967	57488993	(75786316)	+	(T)n	Simple_repeat	1	27	(0)	861404
38	17.2	0.0	0.0	chr12	57522713	57522784	(75752525)	+	(GGC)n	Simple_repeat	1	72	(0)	861463
22	31.3	1.7	3.4	chr12	57523024	57523140	(75752169)	+	(CCCCGC)n	Simple_repeat	1	119	(0)	861464
14	7.0	2.9	5.7	chr12	57764891	57764924	(75510385)	+	(CTGCCT)n	Simple_repeat	1	35	(0)	861794
450	10.2	7.4	0.0	chr12	57936424	57936511	(75338798)	+	L1MA8	LINE/L1	6193	6287	(4)	862087
1029	26.8	3.5	3.1	chr12	61810637	61811030	(71464279)	+	MLT1J1	LTR/ERVL-MaLR	63	444	(0)	867002
1084	27.0	2.2	2.5	chr12	62778263	62778577	(70496732)	+	MLT1J1	LTR/ERVL-MaLR	3	316	(128)	868464
16	22.7	3.7	1.8	chr12	64781090	64781098	(68494211)	+	(GGC)n	Simple_repeat	1	53	(0)	871797
18	13.8	2.4	2.3	chr12	64781099	64781140	(68494169)	+	(GGCCGCG)n	Simple_repeat	1	43	(0)	871798
53	14.1	4.5	0.9	chr12	65278446	65278556	(67996753)	+	GA-rich	Low_complexity	1	116	(0)	872573
11	21.5	4.4	2.1	chr12	65278562	65278606	(67996703)	+	(GGCGGCC)n	Simple_repeat	1	47	(0)	872574
29	3.2	0.0	0.0	chr12	65278805	65278836	(67996473)	+	(CTCTGC)n	Simple_repeat	1	32	(0)	872575
19	21.1	2.0	0.0	chr12	65278877	65278925	(67996384)	+	(CTCCC)n	Simple_repeat	1	50	(0)	872576
2491	6.7	0.0	0.7	chr12	66170196	66170494	(67104815)	C	AluSc8	SINE/Alu	(14)	297	1	873920
1002	25.1	9.6	0.9	chr12	66468001	66468333	(66806976)	+	MLT1J	LTR/ERVL-MaLR	3	367	(145)	874434
12	12.0	0.0	6.5	chr12	67649960	67649990	(65625319)	+	(GCGG)n	Simple_repeat	1	31	(0)	876224
11	18.3	6.7	2.1	chr12	71602696	71602740	(61672569)	+	(AGATTAG)n	Simple_repeat	1	48	(0)	882564
749	26.0	10.4	1.4	chr12	71602830	71603110	(61672199)	+	MLT1J	LTR/ERVL-MaLR	1	309	(203)	882565
230	23.6	0.0	0.0	chr12	71603183	71603237	(61672072)	C	MER91A	DNA/hAT-Tip100	(20)	176	122	882566
262	27.3	7.0	9.0	chr12	72201664	72201808	(61073501)	C	MER102b	DNA/hAT-Charlie	(49)	292	151	883516
242	20.9	0.0	6.9	chr12	75511955	75512026	(57763283)	C	L2c	LINE/L2	(0)	3387	3321	887648
81	30.8	1.4	0.3	chr12	76030576	76030858	(57244451)	+	(TGCGGC)n	Simple_repeat	1	287	(0)	888508
13	16.2	5.4	6.8	chr12	76764091	76764146	(56511163)	+	GA-rich	Low_complexity	1	59	(0)	889813
17	14.2	8.9	1.6	chr12	76764146	76764201	(56511108)	+	(GCTCGC)n	Simple_repeat	1	61	(0)	889814
299	25.4	10.6	0.0	chr12	78388413	78388538	(54886771)	+	MER112	DNA/hAT-Charlie	30	170	(91)	892081
1128	30.2	4.9	2.5	chr12	78388551	78388982	(54886327)	+	MLT1J	LTR/ERVL-MaLR	3	482	(30)	892082
377	34.1	5.7	5.1	chr12	78818522	78818813	(54456496)	C	MLT1J1	LTR/ERVL-MaLR	(138)	310	6	892675
761	26.1	7.7	2.2	chr12	79411042	79411469	(53863840)	C	MLT1J	LTR/ERVL-MaLR	(28)	484	18	893475
17	12.3	0.0	5.1	chr12	79689686	79689724	(53585585)	+	(GCCCG)n	Simple_repeat	1	39	(0)	893881
3251	11.8	1.7	0.4	chr12	84017931	84018716	(49256593)	+	L1P2	LINE/L1	1739	2522	(3624)	899769
330	15.4	0.0	1.9	chr12	84018717	84018769	(49256540)	C	Alu	SINE/Alu	(81)	52	1	899770
231	22.4	6.9	0.0	chr12	84019039	84019105	(49256204)	C	SVA_B	Retroposon/SVA	(1186)	197	126	899771
25535	7.0	0.4	0.2	chr12	84019108	84024813	(49250496)	+	L1PA4	LINE/L1	1461	6329	(1)	899772
304	25.6	4.3	1.1	chr12	93192887	93192977	(40082332)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	419	912921
770	18.3	1.5	0.0	chr12	93193136	93193299	(40082010)	C	MLT1J	LTR/ERVL-MaLR	(352)	160	1	912922
891	17.3	4.5	1.3	chr12	93193378	93193527	(40081782)	+	AluJr	SINE/Alu	1	155	(157)	912923
12	15.8	0.0	3.3	chr12	93441908	93441937	(39833372)	+	(TCTCG)n	Simple_repeat	1	30	(0)	913432
14	15.9	0.0	0.0	chr12	93441980	93442007	(39833302)	+	(GCC)n	Simple_repeat	1	28	(0)	913433
15	27.2	0.0	2.0	chr12	93442319	93442369	(39832940)	+	(CATT)n	Simple_repeat	1	51	(0)	913434
278	25.9	4.3	1.1	chr12	93653777	93653866	(39621443)	+	L2	LINE/L2	2667	2759	(660)	913897
523	24.4	5.2	0.8	chr12	93653875	93654002	(39621307)	+	LTR33A_	LTR/ERVL	32	165	(366)	913898
16	0.0	0.0	0.0	chr12	93654133	93654152	(39621157)	+	(AAC)n	Simple_repeat	1	20	(0)	913899
297	28.0	5.7	9.4	chr12	94262205	94262405	(39012904)	+	MIR3	SINE/MIR	16	208	(0)	914946
578	29.7	6.8	0.2	chr12	94262803	94263023	(39012286)	C	MIRb	SINE/MIR	(0)	268	23	914947
13	8.1	3.6	3.5	chr12	95474285	95474312	(37800997)	+	GA-rich	Low_complexity	1	29	(0)	917299
26296	4.6	0.2	0.1	chr12	97603218	97609364	(35665945)	C	L1PA4	LINE/L1	(3)	6152	1	920925
495	23.1	0.8	0.8	chr12	98145942	98146059	(35129250)	C	LTR67B	LTR/ERVL	(0)	620	503	921739
612	24.5	4.4	0.0	chr12	98146143	98146293	(35129016)	C	LTR67B	LTR/ERVL	(379)	241	84	921739
328	25.8	1.6	6.8	chr12	98146334	98146466	(35128843)	C	MER103C	DNA/hAT-Charlie	(102)	195	70	921740
14	25.4	0.0	6.3	chr12	98516105	98516167	(34759142)	+	G-rich	Low_complexity	1	63	(0)	922401
13	26.2	0.0	2.3	chr12	100142485	100142527	(33132782)	+	(CGC)n	Simple_repeat	1	43	(0)	924964
12	21.6	0.0	0.0	chr12	100142765	100142796	(33132513)	+	(CCACGG)n	Simple_repeat	1	32	(0)	924965
14	0.0	8.3	0.0	chr12	102062252	102062275	(31213034)	+	(AACAA)n	Simple_repeat	1	26	(0)	928502
12	25.8	0.0	0.0	chr12	104216063	104216099	(29059210)	+	(CCGGCGG)n	Simple_repeat	1	37	(0)	932100
19	28.1	0.0	2.8	chr12	104303658	104303729	(28971580)	+	(GGCCG)n	Simple_repeat	1	72	(0)	932309
1149	27.1	6.2	7.9	chr12	104437964	104438443	(28836866)	C	MLT1J	LTR/ERVL-MaLR	(18)	494	24	932576
529	32.7	6.8	1.6	chr12	104438498	104438802	(28836507)	+	L2a	LINE/L2	2919	3240	(186)	932575
12	16.6	4.5	4.3	chr12	105107671	105107714	(28167595)	+	(GAGCCG)n	Simple_repeat	1	46	(0)	933857
13	0.0	0.0	8.0	chr12	106773996	106774020	(26501289)	+	(GCCA)n	Simple_repeat	1	25	(0)	936817
503	23.9	11.4	1.2	chr12	107159423	107159587	(26115722)	C	MLT1J2	LTR/ERVL-MaLR	(3)	445	262	937529
324	23.5	1.2	3.4	chr12	107159669	107159756	(26115553)	C	MLT1J2	LTR/ERVL-MaLR	(295)	149	64	937529
277	28.8	0.0	0.0	chr12	107163362	107163434	(26111875)	C	L2a	LINE/L2	(0)	3426	3354	937536
501	25.5	14.8	2.6	chr12	107163515	107163667	(26111642)	+	MLT1J2	LTR/ERVL-MaLR	1	175	(273)	937537
763	28.6	5.5	9.0	chr12	107283803	107284201	(25991108)	+	MLT1J2	LTR/ERVL-MaLR	65	448	(0)	937787
753	28.1	9.4	1.9	chr12	107559857	107560219	(25715090)	C	L1ME4a	LINE/L1	(0)	6124	5732	938424
216	36.2	12.4	0.7	chr12	107560531	107560672	(25714637)	C	MIRc	SINE/MIR	(46)	222	62	938425
793	25.1	8.6	5.7	chr12	107593616	107594070	(25681239)	C	MLT1J	LTR/ERVL-MaLR	(0)	448	3	938507
642	27.2	10.7	2.9	chr12	108939535	108939670	(24335639)	+	MIRb	SINE/MIR	5	153	(115)	941346
716	29.3	12.3	7.1	chr12	108939671	108940093	(24335216)	+	MLT1J2	LTR/ERVL-MaLR	1	448	(0)	941347
288	30.0	1.0	3.9	chr12	109713380	109713483	(23561826)	+	MIRb	SINE/MIR	157	257	(11)	943152
224	18.2	0.0	10.2	chr12	109736645	109736693	(23538616)	+	L2b	LINE/L2	3309	3352	(23)	943197
205	34.8	1.4	0.0	chr12	110048838	110048906	(23226403)	C	MIRb	SINE/MIR	(62)	206	137	943867
16	16.0	2.2	4.3	chr12	110281725	110281770	(22993539)	+	(GAGGC)n	Simple_repeat	1	47	(0)	944415
305	22.2	7.2	4.3	chr12	110467834	110467927	(22807382)	+	MIRb	SINE/MIR	100	196	(72)	944812
11	24.4	4.0	1.9	chr12	110502042	110502091	(22773218)	+	(CCGTCA)n	Simple_repeat	1	52	(0)	944882
310	22.4	19.9	0.8	chr12	110582565	110582690	(22692619)	+	MIRb	SINE/MIR	91	246	(22)	945046
14	24.3	5.6	2.7	chr12	110583338	110583408	(22691901)	+	(CAGCCC)n	Simple_repeat	1	75	(0)	945047
504	26.7	6.8	0.7	chr12	110614474	110614624	(22660685)	C	MIRb	SINE/MIR	(0)	268	108	945135
630	29.1	5.9	4.2	chr12	110957811	110958120	(22317189)	+	MLT1K	LTR/ERVL-MaLR	42	439	(156)	945991
1473	24.2	11.2	1.3	chr12	111028767	111029190	(22246119)	C	LTR33	LTR/ERVL	(49)	466	2	946166
406	35.4	7.2	7.4	chr12	111029191	111029246	(22246063)	C	L1ME4a	LINE/L1	(332)	5792	5742	946164
517	30.3	5.6	4.0	chr12	111029378	111029609	(22245700)	+	MIRb	SINE/MIR	3	240	(28)	946168
1022	19.9	4.0	0.1	chr12	111029553	111029790	(22245519)	C	MIR	SINE/MIR	(3)	265	5	946169
1935	16.5	0.0	1.9	chr12	112116180	112116495	(21158814)	C	AluJo	SINE/Alu	(2)	310	1	948520
36	0.0	0.0	0.0	chr12	112382328	112382360	(20892949)	+	(GCC)n	Simple_repeat	1	33	(0)	949065
2005	12.2	3.3	0.3	chr12	112409729	112410024	(20865285)	+	AluSx	SINE/Alu	1	305	(7)	949133
1107	25.3	6.8	2.7	chr12	112705102	112705397	(20569912)	C	MLT1J	LTR/ERVL-MaLR	(202)	310	2	949899
246	25.7	5.1	0.0	chr12	112705406	112705479	(20569830)	+	L1ME4c	LINE/L1	375	452	(378)	949900
668	25.9	7.2	0.0	chr12	112716593	112716785	(20558524)	C	MLT1J	LTR/ERVL-MaLR	(301)	211	4	949931
15	19.1	1.9	5.6	chr12	113117189	113117241	(20158068)	+	(GCCTG)n	Simple_repeat	1	54	(0)	950831
27	15.2	0.0	0.0	chr12	113358637	113358687	(19916622)	+	(CTGGCG)n	Simple_repeat	1	51	(0)	951394
415	30.5	1.3	1.9	chr12	114701163	114701316	(18573993)	+	MIRb	SINE/MIR	108	260	(8)	954290
555	23.6	22.5	2.9	chr12	114982686	114983041	(18292268)	C	MLT1J	LTR/ERVL-MaLR	(55)	457	27	955021
800	30.9	9.3	0.9	chr12	115043990	115044312	(18230997)	C	MLT1J2	LTR/ERVL-MaLR	(41)	407	55	955138
905	18.3	3.2	2.7	chr12	115619797	115619981	(17655328)	C	MER5A	DNA/hAT-Charlie	(0)	189	4	956410
852	26.6	10.9	3.2	chr12	115619982	115620180	(17655129)	C	MLT1J2	LTR/ERVL-MaLR	(190)	258	36	956409
506	27.4	3.1	3.1	chr12	115620223	115620384	(17654925)	C	MIRb	SINE/MIR	(71)	197	36	956411
1209	20.7	2.7	1.8	chr12	115767824	115768044	(17507265)	+	MER58A	DNA/hAT-Charlie	2	224	(0)	956742
960	29.4	9.0	1.9	chr12	115768045	115768234	(17507075)	C	MLT1J2	LTR/ERVL-MaLR	(253)	195	3	956741
2441	11.0	0.0	0.0	chr12	115768267	115768567	(17506742)	+	AluSx1	SINE/Alu	1	301	(11)	956743
852	25.7	15.0	1.6	chr12	116257334	116257638	(17017671)	+	MLT1J	LTR/ERVL-MaLR	83	435	(77)	957595
554	27.1	24.3	5.9	chr12	116892288	116892640	(16382669)	C	MLT1J	LTR/ERVL-MaLR	(48)	464	32	959215
230	12.2	14.0	5.8	chr12	117377886	117377937	(15897372)	+	LTR67B	LTR/ERVL	74	130	(490)	960200
707	25.5	15.8	2.1	chr12	117377903	117378230	(15897079)	+	MLT1J2	LTR/ERVL-MaLR	64	444	(4)	960201
343	17.5	1.7	0.0	chr12	118135834	118135890	(15139419)	C	LSU-rRNA_Hsa	rRNA	(2344)	2691	2634	961947
2097	14.5	12.2	1.5	chr12	118506842	118507229	(14768080)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	962706
332	30.9	9.3	4.9	chr12	118507259	118507442	(14767867)	C	MLT1O	LTR/ERVL-MaLR	(2)	540	348	962707
813	29.2	12.1	1.6	chr12	118618812	118619187	(14656122)	+	MLT1J2	LTR/ERVL-MaLR	1	421	(27)	962978
865	26.0	10.6	2.9	chr12	119229821	119229872	(14045437)	C	L2a	LINE/L2	(651)	2768	2704	964291
644	31.4	7.8	5.1	chr12	119229966	119230338	(14044971)	+	MLT1J2	LTR/ERVL-MaLR	65	448	(0)	964297
1604	25.1	9.8	0.9	chr12	119423383	119423848	(13851461)	+	LTR33A	LTR/ERVL	9	520	(0)	964756
17	20.4	2.1	2.1	chr12	119989948	119989994	(13285315)	+	(CCG)n	Simple_repeat	1	48	(0)	966005
12	25.7	0.0	0.0	chr12	119990018	119990054	(13285255)	+	(GGAGCT)n	Simple_repeat	1	37	(0)	966006
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
1329	1.4	0.0	0.0	chr12	120293094	120293237	(12982072)	C	U4	snRNA	(1)	144	1	966634
328	13.0	0.0	0.0	chr12	120302089	120302142	(12973167)	+	L1MA3	LINE/L1	6252	6305	(0)	966667
25	18.9	4.3	5.2	chr12	120469569	120469661	(12805648)	+	(CCG)n	Simple_repeat	1	97	(0)	967152
15	13.9	0.0	0.0	chr12	120495690	120495713	(12779596)	+	(G)n	Simple_repeat	1	24	(0)	967222
226	24.5	0.0	0.0	chr12	120495928	120495980	(12779329)	+	LTR71B	LTR/ERV1	309	361	(249)	967223
13	16.3	0.0	7.5	chr12	120534079	120534118	(12741191)	+	(ATT)n	Simple_repeat	1	40	(0)	967326
23	11.1	6.1	0.0	chr12	120534216	120534264	(12741045)	+	A-rich	Low_complexity	1	52	(0)	967327
296	23.5	13.4	0.0	chr12	121016663	121016787	(12258522)	C	MIR3	SINE/MIR	(23)	185	40	968381
916	12.3	6.1	0.0	chr12	121050889	121051043	(12224266)	C	MLT1J	LTR/ERVL-MaLR	(347)	165	1	968477
465	23.2	1.0	1.0	chr12	121051316	121051415	(12223894)	C	L2b	LINE/L2	(0)	3375	3276	968478
1902	10.9	5.0	0.3	chr12	121399078	121399360	(11875949)	+	AluSq2	SINE/Alu	1	297	(16)	969319
350	28.7	5.4	3.2	chr12	121531475	121531600	(11743709)	C	L3	LINE/CR1	(42)	4057	3929	969608
415	33.0	10.3	8.0	chr12	121531614	121531810	(11743499)	C	L3	LINE/CR1	(290)	3809	3599	969608
1993	11.3	0.7	8.6	chr12	121531811	121532136	(11743173)	+	AluSz6	SINE/Alu	1	300	(12)	969609
1942	13.3	3.0	0.0	chr12	121568187	121568480	(11706829)	+	AluSq	SINE/Alu	1	303	(10)	969699
588	24.8	3.1	1.2	chr12	121568491	121568814	(11706495)	+	L1ME3A	LINE/L1	5799	6159	(14)	969688
17	0.0	0.0	0.0	chr12	121568867	121568885	(11706424)	+	(A)n	Simple_repeat	1	19	(0)	969700
265	17.0	0.0	0.4	chr12	121888506	121888557	(11386752)	+	L2c	LINE/L2	3346	3424	(2)	970592
23	9.4	0.0	7.5	chr12	122226368	122226420	(11048889)	+	(GGCGG)n	Simple_repeat	1	53	(0)	971354
1859	13.4	5.2	0.7	chr12	122501193	122501483	(10773826)	+	AluJr	SINE/Alu	1	305	(7)	972005
269	32.8	9.1	5.3	chr12	123149565	123149754	(10125555)	C	L2c	LINE/L2	(42)	3345	3148	973408
196	23.0	7.5	6.5	chr12	123270154	123270246	(10005063)	+	OldhAT1	DNA/hAT-Ac	1695	1788	(1060)	973653
1269	27.7	9.9	2.5	chr12	123571335	123571727	(9703582)	+	MLT1J2	LTR/ERVL-MaLR	10	434	(14)	974436
15	20.2	0.0	8.3	chr12	123762140	123762199	(9513110)	+	G-rich	Low_complexity	1	60	(0)	974872
19	18.7	6.6	3.4	chr12	123972586	123972677	(9302632)	+	G-rich	Low_complexity	1	94	(0)	975249
203	38.0	1.2	0.0	chr12	124109717	124109795	(9165514)	+	L3	LINE/CR1	3561	3640	(459)	975472
508	31.1	10.7	5.3	chr12	124109821	124110175	(9165134)	+	MLT1J	LTR/ERVL-MaLR	16	433	(79)	975473
4482	15.3	4.4	5.2	chr12	124146994	124147180	(9128129)	C	MER4D	LTR/ERV1	(707)	196	2	975556
1365	24.3	9.1	1.6	chr12	124147181	124147595	(9127714)	+	MLT1L	LTR/ERVL-MaLR	157	608	(2)	975555
346	31.2	2.6	1.8	chr12	124147685	124147798	(9127511)	C	LTR104_Mam	LTR/Gypsy	(2)	1507	1393	975559
469	28.7	12.5	5.8	chr12	124182806	124183410	(9091899)	+	L2b	LINE/L2	2728	3416	(10)	975624
234	34.5	2.7	2.1	chr12	124240383	124240527	(9034782)	C	L2c	LINE/L2	(482)	2937	2792	975740
1038	25.1	12.4	3.6	chr12	124240546	124240934	(9034375)	+	MLT1J2	LTR/ERVL-MaLR	3	430	(18)	975741
452	24.7	0.0	0.0	chr12	124786658	124786750	(8488559)	+	MLT1J2	LTR/ERVL-MaLR	44	136	(312)	976828
359	29.7	7.8	0.0	chr12	124786794	124786911	(8488398)	+	MLT1J2	LTR/ERVL-MaLR	253	380	(68)	976828
659	0.0	0.0	0.0	chr12	124939647	124939718	(8335591)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	977200
587	8.3	0.0	0.0	chr12	124939966	124940037	(8335272)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	977201
1108	27.5	11.7	0.0	chr12	125225560	125225908	(8049401)	C	MLT1J2	LTR/ERVL-MaLR	(13)	435	41	977823
309	33.3	1.8	0.0	chr12	125225906	125226013	(8049296)	C	LTR86A1	LTR/ERVL	(400)	113	4	977821
402	21.6	0.3	4.0	chr12	129383205	129383302	(3892007)	C	LTR67B	LTR/ERVL	(337)	166	81	984942
1946	14.0	3.7	0.0	chr12	129383454	129383738	(3891571)	C	AluSz	SINE/Alu	(16)	296	1	984943
227	31.3	15.6	0.9	chr12	130041939	130042151	(3233158)	C	MIR	SINE/MIR	(0)	262	13	986065
12	17.2	4.9	2.3	chr12	130042530	130042570	(3232739)	+	(GCCCCAC)n	Simple_repeat	1	43	(0)	986066
2314	8.8	0.0	0.0	chr12	130752218	130752540	(2522769)	C	AluSx	SINE/Alu	(0)	312	1	987153
246	23.0	7.4	2.9	chr12	130818921	130819023	(2456286)	C	Arthur1C	DNA/hAT-Tip100	(0)	363	256	987255
14	14.5	3.2	0.0	chr12	130819306	130819336	(2455973)	+	(CCCT)n	Simple_repeat	1	32	(0)	987256
302	29.8	11.8	4.0	chr12	131132401	131132627	(2142682)	C	MLT1K	LTR/ERVL-MaLR	(20)	575	329	987764
259	26.0	7.0	6.4	chr12	131193974	131194129	(2081180)	C	L2b	LINE/L2	(211)	3164	3008	987835
239	18.5	2.4	17.4	chr12	131194240	131194337	(2080972)	+	MLT1N2	LTR/ERVL-MaLR	93	175	(387)	987836
895	31.7	9.5	0.9	chr12	131242804	131243264	(2032045)	C	MLT1J	LTR/ERVL-MaLR	(7)	505	1	987903
1099	29.6	11.5	1.5	chr12	131415840	131416299	(1859010)	+	MLT1J	LTR/ERVL-MaLR	1	512	(0)	988085
284	28.4	2.2	0.0	chr12	131544314	131544401	(1730908)	+	MLT1J1	LTR/ERVL-MaLR	63	152	(292)	988258
6112	11.5	3.0	0.6	chr12	131544365	131545320	(1729989)	+	Tigger1	DNA/TcMar-Tigger	495	1473	(945)	988259
190	28.1	16.1	2.1	chr12	131903329	131903486	(1371823)	+	MIR	SINE/MIR	9	188	(80)	988799
16	3.4	2.9	5.7	chr12	131929671	131929704	(1345605)	+	(GGGGTC)n	Simple_repeat	1	35	(0)	988830
326	25.7	10.3	0.0	chr12	132286580	132286719	(988590)	+	L1MC1	LINE/L1	5927	6082	(251)	989297
1775	15.8	3.5	0.0	chr12	132286726	132286997	(988312)	C	AluSz	SINE/Alu	(24)	288	7	989298
16	23.9	0.0	8.6	chr12	133037457	133037537	(237772)	+	G-rich	Low_complexity	1	81	(0)	990398
400	24.1	4.1	2.1	chr12	133181177	133181320	(93989)	C	L1MEg	LINE/L1	(4318)	1766	1620	990655
14	15.0	10.9	1.6	chr13	26186524	26186578	(88177750)	+	(GCGCACA)n	Simple_repeat	1	61	(0)	1002856
31	19.1	3.9	0.0	chr13	26254168	26254244	(88110084)	+	(TGAG)n	Simple_repeat	1	80	(0)	1002972
276	13.1	0.0	9.0	chr13	27806772	27806838	(86557490)	+	UCON49	LINE/L2	638	698	(1)	1005544
18	7.8	0.0	0.0	chr13	29850579	29850605	(84513723)	+	(GGC)n	Simple_repeat	1	27	(0)	1008715
1461	17.6	8.1	0.6	chr13	30182652	30183048	(84181280)	C	L1MDa	LINE/L1	(3712)	2825	2397	1009257
2095	12.1	0.0	1.3	chr13	30427519	30427816	(83936512)	+	AluSz	SINE/Alu	2	295	(17)	1009676
18	27.4	1.3	4.0	chr13	30464650	30464724	(83899604)	+	(CCG)n	Simple_repeat	1	76	(0)	1009735
31	0.0	0.0	0.0	chr13	30464762	30464788	(83899540)	+	(TG)n	Simple_repeat	1	27	(0)	1009736
228	23.8	2.4	1.2	chr13	34921090	34921170	(79443158)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	431	1016499
16	26.9	2.9	2.8	chr13	36346430	36346499	(78017829)	+	(CGC)n	Simple_repeat	1	72	(0)	1018402
2721	3.7	0.0	0.0	chr13	37000064	37000363	(77363965)	+	AluY	SINE/Alu	1	300	(11)	1019396
14	10.0	6.2	0.0	chr13	37000762	37000793	(77363535)	+	(GCGCAG)n	Simple_repeat	1	34	(0)	1019397
18	7.6	0.0	0.0	chr13	38687431	38687458	(75676870)	+	(GCT)n	Simple_repeat	1	28	(0)	1021594
265	20.0	4.8	0.0	chr13	40320373	40320432	(74043896)	C	LTR67B	LTR/ERVL	(470)	150	88	1023914
420	16.8	15.2	0.0	chr13	40320382	40320476	(74043852)	C	MLT1J1	LTR/ERVL-MaLR	(329)	115	4	1023915
216	30.2	9.3	4.5	chr13	40320479	40320610	(74043718)	C	L2c	LINE/L2	(277)	3110	2972	1023912
786	7.9	0.0	2.0	chr13	41194752	41194852	(73169476)	C	AluJb	SINE/Alu	(213)	99	1	1025419
20	6.3	0.0	5.4	chr13	41263790	41263826	(73100502)	+	(GGGA)n	Simple_repeat	1	37	(0)	1025541
12	15.7	2.6	5.0	chr13	41311487	41311525	(73052803)	+	(CCTG)n	Simple_repeat	1	40	(0)	1025640
853	26.3	10.9	9.4	chr13	42078153	42078655	(72285673)	C	LTR67B	LTR/ERVL	(0)	503	9	1026812
446	21.2	0.9	3.4	chr13	42078665	42078781	(72285547)	C	HAL1b	LINE/L1	(77)	2344	2231	1026813
2277	11.2	0.7	0.7	chr13	42644285	42644579	(71719749)	C	AluSx	SINE/Alu	(17)	295	1	1027671
581	30.1	0.6	2.4	chr13	42644608	42644774	(71719554)	+	MLT1J2	LTR/ERVL-MaLR	37	200	(248)	1027672
2414	23.8	1.6	2.1	chr13	42644770	42645335	(71718993)	C	MER119	DNA/hAT-Charlie	(16)	567	5	1027673
63	13.9	4.1	0.0	chr13	43879726	43879847	(70484481)	+	(CGAGG)n	Simple_repeat	1	127	(0)	1029464
208	0.0	0.0	0.0	chr13	44142133	44142311	(70222017)	+	(CTCGG)n	Simple_repeat	1	179	(0)	1029840
1286	28.5	8.4	1.9	chr13	44609182	44609656	(69754672)	+	MLT1J	LTR/ERVL-MaLR	1	509	(3)	1030586
257	20.5	10.3	0.0	chr13	44918161	44918238	(69446090)	+	L2	LINE/L2	2235	2321	(1098)	1031205
2323	10.8	0.0	1.3	chr13	45729158	45729473	(68634855)	+	AluSx	SINE/Alu	1	312	(0)	1032746
1054	25.9	11.7	3.4	chr13	45941306	45941721	(68422607)	+	MLT1N2	LTR/ERVL-MaLR	1	455	(107)	1033118
286	17.0	8.6	0.0	chr13	45941811	45941863	(68422465)	C	MLT1J2	LTR/ERVL-MaLR	(2)	446	389	1033119
254	25.4	6.2	4.7	chr13	46089277	46089404	(68274924)	+	MLT1J1	LTR/ERVL-MaLR	22	151	(293)	1033330
1817	16.6	5.8	1.1	chr13	46089574	46089921	(68274407)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1033331
772	29.6	6.7	2.6	chr13	47696667	47696968	(66667360)	C	MLT1J2	LTR/ERVL-MaLR	(131)	317	3	1035645
3118	26.2	7.7	12.1	chr13	48997791	48999610	(65364718)	+	MLT1A-int	LTR/ERVL-MaLR	3	1735	(0)	1037704
380	28.9	7.9	5.0	chr13	49793248	49793469	(64570859)	+	L2a	LINE/L2	3189	3417	(9)	1039050
538	26.7	6.9	1.8	chr13	51168369	51168532	(63195796)	+	MLT1J	LTR/ERVL-MaLR	71	243	(269)	1041183
2251	14.3	10.3	0.5	chr13	51168682	51169067	(63195261)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1041184
437	20.0	0.0	0.0	chr13	51272497	51272566	(63091762)	+	MER58A	DNA/hAT-Charlie	1	70	(154)	1041314
33	0.0	0.0	0.0	chr13	51272567	51272594	(63091734)	+	(AC)n	Simple_repeat	1	28	(0)	1041315
235	32.7	4.7	1.0	chr13	51272606	51272707	(63091621)	+	HAL1	LINE/L1	407	512	(1995)	1041316
348	26.2	5.8	1.5	chr13	51298638	51298769	(63065559)	C	MLT1N2	LTR/ERVL-MaLR	(13)	549	412	1041354
252	25.9	0.0	1.2	chr13	51298992	51299065	(63065263)	C	MLT1N2	LTR/ERVL-MaLR	(359)	153	44	1041354
447	29.6	3.0	5.4	chr13	51324284	51324490	(63039838)	+	L2b	LINE/L2	3192	3386	(1)	1041403
12	13.9	0.0	0.0	chr13	51324491	51324514	(63039814)	+	(AAAG)n	Simple_repeat	1	24	(0)	1041404
336	25.0	1.2	0.0	chr13	51324586	51324665	(63039663)	+	MIRb	SINE/MIR	113	193	(75)	1041405
2079	11.1	1.8	0.4	chr13	51470622	51470901	(62893427)	+	AluSq2	SINE/Alu	13	296	(17)	1041636
416	29.2	9.3	10.3	chr13	51470902	51471095	(62893233)	C	MLT1J	LTR/ERVL-MaLR	(306)	206	2	1041635
242	31.5	4.3	0.0	chr13	51471097	51471185	(62893143)	+	MIRb	SINE/MIR	170	262	(6)	1041637
229	22.1	0.8	3.2	chr13	52159787	52159872	(62204456)	+	MIRc	SINE/MIR	16	102	(166)	1042687
621	25.0	11.8	6.3	chr13	52159874	52160176	(62204152)	+	MLT1D	LTR/ERVL-MaLR	1	322	(183)	1042688
16	26.2	1.8	1.8	chr13	52847304	52847359	(61516969)	+	(GCG)n	Simple_repeat	1	57	(0)	1043780
421	27.2	1.6	2.3	chr13	73602408	73602535	(40761793)	+	MLT1J2	LTR/ERVL-MaLR	37	163	(285)	1070809
1915	11.9	1.6	0.0	chr13	73602618	73602919	(40761409)	+	L1PREC2	LINE/L1	4766	5072	(1074)	1070810
14	12.8	5.9	0.0	chr13	74135691	74135724	(40228604)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1071559
13	18.2	4.3	4.1	chr13	80339777	80339823	(34024505)	+	(AAC)n	Simple_repeat	1	49	(0)	1080201
12	34.1	1.6	0.0	chr13	80339824	80339837	(34024491)	+	A-rich	Low_complexity	2	63	(0)	1080202
1692	29.4	9.3	0.7	chr13	85650790	85651327	(28713001)	+	MLT2F	LTR/ERVL	1	589	(74)	1086815
1546	27.9	8.8	1.8	chr13	85651339	85651853	(28712475)	+	MLT1F2	LTR/ERVL-MaLR	1	555	(5)	1086816
16	21.4	2.3	0.0	chr13	87671790	87671869	(26692459)	+	(GGC)n	Simple_repeat	1	81	(0)	1089326
13	13.1	0.0	0.0	chr13	87677539	87677563	(26686765)	+	(CGG)n	Simple_repeat	1	25	(0)	1089329
37	23.5	0.0	1.1	chr13	87677746	87677837	(26686491)	+	(CAG)n	Simple_repeat	1	92	(0)	1089330
661	1.4	0.0	0.0	chr13	94549650	94549722	(19814606)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	1098498
13	20.6	2.8	8.1	chr13	94713022	94713093	(19651235)	+	(CGCCG)n	Simple_repeat	1	74	(0)	1098778
13	11.2	4.5	6.5	chr13	94713577	94713620	(19650708)	+	(CCCCTC)n	Simple_repeat	1	46	(0)	1098779
13	4.3	3.9	3.7	chr13	95301318	95301343	(19062985)	+	(GCCGG)n	Simple_repeat	1	27	(0)	1099755
1325	24.8	13.7	5.6	chr13	96903873	96904445	(17459883)	C	LTR33C	LTR/ERVL	(0)	629	3	1102232
307	15.6	2.5	6.1	chr13	96904446	96904507	(17459821)	C	MER5A1	DNA/hAT-Charlie	(20)	146	88	1102231
1105	27.6	9.3	13.0	chr13	97118565	97119088	(17245240)	+	LTR33B	LTR/ERVL	1	503	(0)	1102547
26	0.0	0.0	0.0	chr13	97434101	97434125	(16930203)	+	(GCG)n	Simple_repeat	1	25	(0)	1102982
578	24.0	0.7	0.0	chr13	98752852	98753001	(15611327)	C	MER5A	DNA/hAT-Charlie	(38)	151	1	1105188
1174	25.1	5.5	5.7	chr13	98872808	98873225	(15491103)	+	LTR16B2	LTR/ERVL	11	427	(35)	1105333
1080	26.6	13.0	2.1	chr13	98873407	98873836	(15490492)	+	MLT1J	LTR/ERVL-MaLR	14	497	(15)	1105334
13	18.9	5.8	3.6	chr13	99103635	99103686	(15260642)	+	(TCC)n	Simple_repeat	1	55	(0)	1105700
16	18.2	0.0	2.6	chr13	99970795	99970833	(14393495)	+	(GCC)n	Simple_repeat	1	39	(0)	1107127
27	26.4	2.3	0.0	chr13	99971151	99971236	(14393092)	+	GA-rich	Low_complexity	1	88	(0)	1107128
12	15.3	5.3	2.5	chr13	100588762	100588799	(13775529)	+	G-rich	Low_complexity	1	40	(0)	1108183
11	20.7	0.0	2.9	chr13	102799527	102799561	(11564767)	+	G-rich	Low_complexity	1	35	(0)	1111292
561	28.2	4.6	0.5	chr13	108734510	108734698	(5629630)	C	MLT1N2	LTR/ERVL-MaLR	(9)	553	357	1119186
286	24.1	10.7	2.7	chr13	108734816	108734926	(5629402)	C	LTR67B	LTR/ERVL	(424)	196	76	1119187
409	19.7	0.0	0.0	chr13	108735038	108735113	(5629215)	+	LTR81A	LTR/Gypsy	180	255	(1095)	1119188
25247	6.5	0.4	0.6	chr13	108735116	108741282	(5623046)	C	L1PA5	LINE/L1	(3)	6151	1	1119189
13	17.6	0.0	2.9	chr13	110914896	110914929	(3449399)	+	(GCCCGC)n	Simple_repeat	1	34	(0)	1121925
17	14.6	0.0	4.8	chr13	110915076	110915117	(3449211)	+	G-rich	Low_complexity	1	42	(0)	1121926
11	21.6	0.0	4.9	chr13	111154010	111154050	(3210278)	+	G-rich	Low_complexity	1	41	(0)	1122233
373	32.8	7.8	0.0	chr13	111949570	111949758	(2414570)	+	LTR16C	LTR/ERVL	285	489	(0)	1122994
17	12.7	0.0	0.0	chr13	112588396	112588421	(1775907)	+	(GT)n	Simple_repeat	1	26	(0)	1123662
12	26.9	3.6	1.8	chr13	112588565	112588619	(1775709)	+	(GCCCG)n	Simple_repeat	1	57	(0)	1123663
451	29.6	16.2	0.0	chr13	112917097	112917427	(1446901)	+	L2c	LINE/L2	2263	2657	(762)	1124037
13	15.6	2.0	7.8	chr13	113296931	113296980	(1067348)	+	(CTTCCT)n	Simple_repeat	1	51	(0)	1124474
1856	6.7	9.7	2.6	chr13	114280990	114281258	(83070)	+	AluSz	SINE/Alu	1	290	(22)	1125452
12	15.8	0.0	3.3	chr13	114281551	114281580	(82748)	+	G-rich	Low_complexity	1	30	(0)	1125453
12	27.6	6.2	0.0	chr13	114314573	114314637	(49691)	+	(GCCGCCC)n	Simple_repeat	1	69	(0)	1125515
17	13.8	5.0	0.0	chr14	22886947	22886986	(84156732)	+	(CCGCC)n	Simple_repeat	1	42	(0)	1131899
663	1.4	0.0	0.0	chr14	22929701	22929773	(84113945)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	1131978
49	3.0	2.7	4.0	chr14	23551653	23551726	(83491992)	+	(CCT)n	Simple_repeat	1	76	(0)	1133023
16	5.2	0.0	0.0	chr14	24232390	24232409	(82811309)	+	(C)n	Simple_repeat	1	20	(0)	1133955
13	23.5	0.0	0.0	chr14	24316281	24316315	(82727403)	+	(CCG)n	Simple_repeat	1	35	(0)	1134063
513	30.6	11.1	1.9	chr14	24701128	24701487	(82342231)	+	MLT1J2	LTR/ERVL-MaLR	15	411	(37)	1134553
346	35.5	5.2	1.5	chr14	27389999	27390201	(79653517)	C	MLT1J2	LTR/ERVL-MaLR	(25)	423	213	1137987
352	21.9	0.0	0.0	chr14	27390268	27390331	(79653387)	C	MLT1J2	LTR/ERVL-MaLR	(335)	109	46	1137987
859	27.6	8.0	3.3	chr14	27390332	27390665	(79653053)	+	LTR16	LTR/ERVL	1	351	(87)	1137988
406	32.2	4.3	3.4	chr14	31561070	31561275	(75482443)	+	MIRc	SINE/MIR	44	251	(17)	1143879
983	0.0	0.0	0.0	chr14	32202045	32202150	(74841568)	+	U6	snRNA	1	106	(1)	1144827
983	0.0	0.0	0.0	chr14	32203164	32203269	(74840449)	C	U6	snRNA	(1)	106	1	1144828
670	21.3	5.2	4.2	chr14	32285952	32286240	(74757478)	C	MLT2F	LTR/ERVL	(327)	336	7	1144920
326	29.4	17.8	3.2	chr14	32286320	32286505	(74757213)	C	MLT1L	LTR/ERVL-MaLR	(81)	461	243	1144921
778	27.6	3.7	16.1	chr14	33959669	33960215	(73083503)	+	LTR33A	LTR/ERVL	1	477	(43)	1146962
793	31.5	3.7	1.0	chr14	33986827	33987115	(73056603)	+	MLT1J	LTR/ERVL-MaLR	1	297	(215)	1147017
12	21.5	8.2	1.5	chr14	34714282	34714342	(72329376)	+	(GCCCCG)n	Simple_repeat	1	66	(0)	1148492
15	19.5	0.0	0.0	chr14	34714549	34714583	(72329135)	+	(CGGCTG)n	Simple_repeat	1	35	(0)	1148493
13	17.6	0.0	2.9	chr14	34873685	34873718	(72170000)	+	(CCCTTC)n	Simple_repeat	1	34	(0)	1148820
13	15.9	0.0	0.0	chr14	34874153	34874180	(72169538)	+	G-rich	Low_complexity	1	28	(0)	1148821
6263	23.6	2.8	9.2	chr14	35896806	35898919	(71144799)	C	L1M2	LINE/L1	(4866)	2700	727	1150824
629	20.8	0.0	7.1	chr14	36281431	36281570	(70762148)	C	MLT1J2	LTR/ERVL-MaLR	(280)	168	39	1151369
2287	5.9	4.0	0.0	chr14	39170566	39170853	(67872865)	+	AluSp	SINE/Alu	3	302	(11)	1155280
259	32.0	8.0	2.6	chr14	41362069	41362222	(65681496)	C	MLT1J1	LTR/ERVL-MaLR	(39)	409	247	1157974
351	23.1	4.2	0.0	chr14	41362297	41362387	(65681331)	C	MLT1J1	LTR/ERVL-MaLR	(296)	148	54	1157974
2827	1.0	0.0	0.0	chr14	49586580	49586879	(57456839)	+	7SLRNA	srpRNA	1	300	(20)	1168209
371	20.4	21.9	1.5	chr14	49598161	49598294	(57445424)	C	MER96	DNA/hAT-Tip100	(3)	172	4	1168238
23	10.4	0.0	4.4	chr14	50231658	50231702	(56812016)	+	(CGG)n	Simple_repeat	1	45	(0)	1169572
13	13.1	2.7	5.3	chr14	50396967	50397003	(56646715)	+	(CCCG)n	Simple_repeat	1	38	(0)	1169909
13	16.3	6.5	6.1	chr14	50668403	50668464	(56375254)	+	G-rich	Low_complexity	1	66	(0)	1170320
14	29.8	0.0	3.3	chr14	50944096	50944156	(56099562)	+	(CCCGGC)n	Simple_repeat	1	61	(0)	1170724
740	29.7	6.9	7.7	chr14	54441573	54442066	(52601652)	C	L2c	LINE/L2	(1)	3386	2901	1175931
6505	13.9	7.2	1.1	chr14	55899805	55900959	(51142759)	C	Tigger3b	DNA/TcMar-Tigger	(1)	1230	1	1178492
932	24.6	10.4	6.2	chr14	55900960	55901250	(51142468)	C	MLT1J1	LTR/ERVL-MaLR	(144)	300	1	1178491
650	23.5	9.2	1.0	chr14	55929220	55929434	(51114284)	C	MLT1J	LTR/ERVL-MaLR	(236)	276	1	1178539
13	15.1	5.1	2.4	chr14	57268730	57268768	(49774950)	+	(CTCCG)n	Simple_repeat	1	41	(0)	1180525
359	32.1	9.0	3.5	chr14	58944127	58944326	(48099392)	+	MIR	SINE/MIR	17	228	(34)	1183020
22	6.7	0.0	0.0	chr14	64503857	64503888	(42539830)	+	(GTGC)n	Simple_repeat	1	32	(0)	1191408
13	9.3	0.0	0.0	chr14	64503883	64503905	(42539813)	+	(GCCC)n	Simple_repeat	1	23	(0)	1191409
71	0.0	0.0	0.0	chr14	64704385	64704447	(42339271)	+	(CTCCCTCG)n	Simple_repeat	1	63	(0)	1191799
27	6.0	0.0	0.0	chr14	65102446	65102480	(41941238)	+	(CACT)n	Simple_repeat	1	35	(0)	1192407
17	0.0	4.2	0.0	chr14	65102481	65102495	(41941223)	+	(CA)n	Simple_repeat	1	16	(0)	1192408
17	31.6	0.0	1.5	chr14	65102710	65102725	(41940993)	+	(GGCGC)n	Simple_repeat	1	29	(37)	1192409
22	10.0	0.0	0.0	chr14	65102726	65102757	(41940961)	+	(G)n	Simple_repeat	1	32	(0)	1192410
17	31.6	0.0	1.5	chr14	65102758	65102775	(41940943)	+	(GGCGC)n	Simple_repeat	30	66	(0)	1192409
684	6.5	0.0	0.0	chr14	65168705	65168797	(41874921)	C	L1MA1	LINE/L1	(4)	6298	6206	1192570
942	26.2	3.7	3.7	chr14	65168815	65169087	(41874631)	+	MLT1J	LTR/ERVL-MaLR	8	280	(232)	1192571
228	23.4	1.5	4.5	chr14	65169184	65169250	(41874468)	+	LTR67B	LTR/ERVL	58	122	(498)	1192572
12	11.5	3.3	3.2	chr14	67241593	67241622	(39802096)	+	(GCGG)n	Simple_repeat	1	31	(0)	1195682
276	31.1	3.7	1.0	chr14	69014628	69014731	(38028987)	+	MIRc	SINE/MIR	19	125	(143)	1198692
2135	25.1	9.8	0.5	chr14	70803783	70804340	(36239378)	+	LTR67B	LTR/ERVL	3	617	(3)	1201770
645	16.8	10.9	0.0	chr14	72169624	72169754	(34873964)	+	MLT1J2	LTR/ERVL-MaLR	2	148	(300)	1203893
609	25.9	0.0	0.0	chr14	72169819	72169949	(34873769)	+	MER5A1	DNA/hAT-Charlie	36	166	(0)	1203894
1491	19.4	2.2	0.9	chr14	72736060	72736377	(34307341)	C	MER33	DNA/hAT-Charlie	(2)	322	1	1204727
446	27.4	2.6	0.0	chr14	72847845	72847957	(34195761)	+	MLT1J	LTR/ERVL-MaLR	64	179	(333)	1204941
13	24.5	0.0	2.2	chr14	73058803	73058847	(33984871)	+	G-rich	Low_complexity	1	45	(0)	1205429
2074	10.2	0.0	8.1	chr14	73490620	73490754	(33552964)	C	AluSx	SINE/Alu	(193)	119	1	1206397
3849	28.2	1.6	1.1	chr14	73712619	73713668	(33330050)	C	MamGyp-int	LTR/Gypsy	(3972)	1131	76	1206930
313	21.5	1.8	23.0	chr14	73836568	73836657	(33207061)	C	LTR16C	LTR/ERVL	(41)	448	381	1207183
491	27.7	20.0	1.5	chr14	73836642	73836841	(33206877)	C	MLT2E	LTR/ERVL	(389)	274	38	1207185
433	30.9	9.5	5.6	chr14	73836929	73837302	(33206416)	C	MamGypLTR1c	LTR/Gypsy	(57)	746	357	1207186
302	21.2	7.2	10.3	chr14	73852201	73852262	(33191456)	C	L2a	LINE/L2	(5)	3421	3362	1207230
1231	26.3	8.6	5.6	chr14	74988828	74989310	(32054408)	C	MLT1J	LTR/ERVL-MaLR	(8)	504	6	1209532
342	31.5	8.4	0.8	chr14	74989315	74989445	(32054273)	C	L1ME4a	LINE/L1	(89)	6035	5894	1209533
247	20.4	0.0	0.0	chr14	75402814	75402857	(31640861)	+	MLT1N2	LTR/ERVL-MaLR	31	74	(488)	1210386
1349	23.3	2.6	1.3	chr14	75402942	75403245	(31640473)	+	MLT1J	LTR/ERVL-MaLR	2	309	(203)	1210387
16	22.1	0.0	0.0	chr14	75661105	75661136	(31382582)	+	A-rich	Low_complexity	1	32	(0)	1210880
1063	27.5	5.0	5.9	chr14	76426048	76426468	(30617250)	C	MLT1J2	LTR/ERVL-MaLR	(31)	417	1	1212174
447	22.2	1.6	6.0	chr14	76880313	76880446	(30163272)	+	MER20	DNA/hAT-Charlie	16	143	(76)	1213120
346	18.6	6.1	3.6	chr14	76880584	76880715	(30163003)	+	MLT1J	LTR/ERVL-MaLR	95	292	(318)	1213121
19	7.8	4.5	4.3	chr14	77040280	77040323	(30003395)	+	GA-rich	Low_complexity	1	46	(0)	1213492
1385	24.1	11.3	8.3	chr14	77208108	77208682	(29835036)	C	LTR67B	LTR/ERVL	(20)	600	7	1213827
303	28.1	1.2	0.0	chr14	77208698	77208779	(29834939)	+	MIR	SINE/MIR	180	262	(0)	1213826
312	29.5	15.7	2.1	chr14	77209098	77209284	(29834434)	C	MIRc	SINE/MIR	(35)	233	17	1213828
16	24.0	0.0	5.1	chr14	77616376	77616434	(29427284)	+	(CCCCG)n	Simple_repeat	1	59	(0)	1214574
18	9.4	2.9	0.0	chr14	77616453	77616486	(29427232)	+	(CGGCTG)n	Simple_repeat	1	35	(0)	1214575
12	13.9	0.0	0.0	chr14	77616616	77616639	(29427079)	+	(GGC)n	Simple_repeat	1	24	(0)	1214576
736	21.0	5.4	6.9	chr14	77764139	77764384	(29279334)	+	MIR	SINE/MIR	17	258	(4)	1214890
673	25.4	8.2	0.0	chr14	78327612	78327800	(28715918)	C	L2a	LINE/L2	(0)	3426	3221	1216041
750	22.4	15.8	4.3	chr14	78327801	78328117	(28715601)	C	MLT2F	LTR/ERVL	(310)	353	1	1216042
548	24.3	14.6	6.0	chr14	78885871	78886196	(28157522)	C	MLT1J1	LTR/ERVL-MaLR	(75)	369	9	1216943
408	23.3	7.9	3.0	chr14	80455114	80455246	(26588472)	+	MLT1J	LTR/ERVL-MaLR	63	202	(310)	1219232
314	28.6	7.7	1.2	chr14	80455280	80455449	(26588269)	+	MLT1J	LTR/ERVL-MaLR	244	425	(23)	1219232
232	30.1	7.6	2.7	chr14	82075653	82075727	(24967991)	C	MER91A	DNA/hAT-Tip100	(0)	196	118	1221608
17	26.4	3.8	2.4	chr14	85533820	85533869	(21509849)	+	(GCCGCC)n	Simple_repeat	1	83	(0)	1226391
18	10.8	0.0	0.0	chr14	85533870	85533899	(21509819)	+	(GCC)n	Simple_repeat	1	30	(0)	1226392
989	28.0	11.0	7.3	chr14	88089335	88089695	(18954023)	C	MLT1J	LTR/ERVL-MaLR	(75)	437	53	1229929
54	0.0	0.0	0.0	chr14	88089696	88089743	(18953975)	+	(AAG)n	Simple_repeat	1	48	(0)	1229931
989	28.0	11.0	7.3	chr14	88089744	88089787	(18953931)	C	MLT1J	LTR/ERVL-MaLR	(460)	52	3	1229929
639	24.9	3.4	1.5	chr14	88089863	88090062	(18953656)	+	LTR79	LTR/ERVL	315	518	(9)	1229932
17	8.6	5.1	2.4	chr14	88563467	88563505	(18480213)	+	G-rich	Low_complexity	1	41	(0)	1230630
4426	17.1	4.5	3.1	chr14	89010494	89011814	(18031904)	+	L1MB8	LINE/L1	4844	6178	(0)	1231374
925	27.7	5.7	7.9	chr14	89011859	89012261	(18031457)	+	MLT1J	LTR/ERVL-MaLR	27	451	(61)	1231375
251	25.3	3.9	2.6	chr14	89402515	89402591	(17641127)	+	LTR67B	LTR/ERVL	77	154	(466)	1232010
738	25.1	15.6	7.3	chr14	89402526	89402869	(17640849)	+	MLT1J	LTR/ERVL-MaLR	100	477	(35)	1232011
259	35.2	3.2	0.8	chr14	89440873	89440995	(17602723)	C	MamRTE1	LINE/RTE-BovB	(516)	3296	3171	1232088
13	14.7	3.3	0.0	chr14	89441087	89441116	(17602602)	+	(CTTCC)n	Simple_repeat	1	31	(0)	1232089
487	21.5	6.9	0.0	chr14	89808066	89808186	(17235532)	+	MLT1J2	LTR/ERVL-MaLR	3	132	(316)	1232775
247	22.0	0.0	0.3	chr14	90331510	90331569	(16712149)	C	MIRc	SINE/MIR	(62)	168	110	1233689
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
775	24.6	4.2	0.5	chr14	91230494	91230677	(15813041)	+	MLT1J2	LTR/ERVL-MaLR	3	193	(255)	1235359
239	25.9	0.0	0.0	chr14	92748911	92748964	(14294754)	C	MER5B	DNA/hAT-Charlie	(10)	168	115	1238155
318	27.6	7.3	6.0	chr14	92778755	92778970	(14264748)	C	LTR81	LTR/Gypsy	(32)	1121	903	1238221
721	15.6	0.8	1.5	chr14	92778966	92779095	(14264623)	+	MLT1J	LTR/ERVL-MaLR	40	168	(344)	1238222
576	25.9	11.4	1.7	chr14	92779118	92779353	(14264365)	+	MLT1J	LTR/ERVL-MaLR	251	512	(0)	1238222
12	19.2	3.2	7.8	chr14	93430409	93430470	(13613248)	+	(CCTCCG)n	Simple_repeat	1	64	(0)	1239454
873	25.4	16.9	3.2	chr14	93683157	93683545	(13360173)	C	MLT1J2	LTR/ERVL-MaLR	(9)	435	1	1239842
15	17.7	2.2	4.3	chr14	93939678	93939730	(13103988)	+	G-rich	Low_complexity	1	51	(0)	1240324
37	0.0	0.0	4.7	chr14	96100459	96100501	(10943217)	+	(CCCTCCT)n	Simple_repeat	1	43	(0)	1244242
1071	21.8	15.4	1.0	chr14	96754248	96754553	(10289165)	+	MLT1J2	LTR/ERVL-MaLR	2	359	(89)	1245455
506	28.1	6.8	2.2	chr14	96762792	96762973	(10280745)	C	MLT1J	LTR/ERVL-MaLR	(250)	262	72	1245476
16	14.3	0.0	6.8	chr14	96797485	96797530	(10246188)	+	G-rich	Low_complexity	1	42	(0)	1245551
347	30.5	10.5	0.0	chr14	97021720	97021847	(10021871)	C	MLT1J	LTR/ERVL-MaLR	(34)	478	336	1245929
465	16.7	1.3	0.0	chr14	97021962	97022039	(10021679)	C	MLT1J	LTR/ERVL-MaLR	(360)	152	74	1245929
474	27.4	5.4	5.0	chr14	97328812	97329049	(9714669)	C	MLT1J2	LTR/ERVL-MaLR	(207)	241	3	1246513
253	31.8	0.9	6.8	chr14	97329111	97329228	(9714490)	+	MIRb	SINE/MIR	6	116	(152)	1246515
407	32.5	7.2	1.0	chr14	97395282	97395477	(9648241)	C	MIR	SINE/MIR	(16)	246	38	1246642
792	29.9	10.1	4.8	chr14	99041343	99041826	(8001892)	+	L2c	LINE/L2	2882	3386	(1)	1249397
1790	27.1	4.2	4.0	chr14	99041897	99042543	(8001175)	+	MLT2F	LTR/ERVL	16	663	(0)	1249398
307	23.1	2.5	1.3	chr14	99138103	99138181	(7905537)	C	MLT1J2	LTR/ERVL-MaLR	(333)	179	100	1249570
27	18.8	0.0	3.1	chr14	99603435	99603498	(7440220)	+	(GCC)n	Simple_repeat	1	64	(0)	1250257
19	29.6	0.0	0.0	chr14	100239373	100239449	(6804269)	+	(CGACGG)n	Simple_repeat	1	77	(0)	1251503
33	2.9	0.0	0.0	chr14	100239451	100239485	(6804233)	+	(CCA)n	Simple_repeat	1	35	(0)	1251504
22	26.9	2.2	7.1	chr14	100239703	100239839	(6803879)	+	(GGC)n	Simple_repeat	1	140	(0)	1251505
2037	11.6	0.0	0.4	chr14	100317861	100318137	(6725581)	+	AluSx1	SINE/Alu	36	311	(1)	1251656
251	33.3	1.2	1.2	chr14	100318581	100318665	(6725053)	C	MIRc	SINE/MIR	(133)	135	51	1251657
247	24.1	0.0	0.0	chr14	101964237	101964294	(5079424)	C	L2b	LINE/L2	(45)	3330	3273	1253965
13	7.2	3.0	5.9	chr14	101964492	101964524	(5079194)	+	G-rich	Low_complexity	1	34	(0)	1253966
13	24.5	1.9	3.8	chr14	101964805	101964856	(5078862)	+	(GCG)n	Simple_repeat	1	53	(0)	1253967
12	22.6	5.7	1.8	chr14	102087264	102087316	(4956402)	+	(CGCGCGC)n	Simple_repeat	1	56	(0)	1254194
12	18.4	5.4	0.0	chr14	102087355	102087391	(4956327)	+	(CCGCCCT)n	Simple_repeat	1	39	(0)	1254195
256	27.4	4.5	0.0	chr14	102087766	102087849	(4955869)	C	CR1_Mam	LINE/CR1	(52)	2152	2065	1254196
17	19.8	8.4	1.3	chr14	102776817	102776887	(4266831)	+	(TGCGTG)n	Simple_repeat	1	77	(0)	1255667
784	11.9	1.5	3.7	chr14	103528850	103528983	(3514735)	C	AluJo	SINE/Alu	(181)	131	1	1256995
15	22.5	1.8	3.6	chr14	103529138	103529192	(3514526)	+	(GGCGGA)n	Simple_repeat	1	56	(0)	1256996
1899	12.2	2.4	1.4	chr14	103627427	103627712	(3416006)	+	AluJr4	SINE/Alu	1	289	(23)	1257195
15	34.6	0.0	1.4	chr14	103629120	103629193	(3414525)	+	G-rich	Low_complexity	1	74	(0)	1257196
2450	8.1	0.0	0.0	chr14	103726949	103727245	(3316473)	C	AluSq2	SINE/Alu	(16)	297	1	1257377
255	33.3	11.4	0.0	chr14	103869828	103869983	(3173735)	+	L2a	LINE/L2	2736	2911	(508)	1257692
229	27.7	6.0	4.7	chr14	104138112	104138259	(2905459)	+	MIR3	SINE/MIR	4	153	(55)	1258137
23	18.2	4.8	0.0	chr14	104724139	104724200	(2319518)	+	(GCCCCG)n	Simple_repeat	1	65	(0)	1258755
23	23.4	3.6	6.0	chr14	104800794	104800905	(2242813)	+	(CGG)n	Simple_repeat	1	116	(0)	1258826
826	28.3	6.2	1.0	chr14	104870086	104870374	(2173344)	C	MER58B	DNA/hAT-Charlie	(0)	341	37	1258955
188	34.1	4.5	3.7	chr14	104870451	104870584	(2173134)	C	L2b	LINE/L2	(176)	3199	3065	1258956
31	15.8	0.0	7.8	chr14	105021289	105021378	(2022340)	+	(GCCCC)n	Simple_repeat	1	90	(0)	1259101
225	31.5	6.1	0.9	chr14	105070152	105070260	(1973458)	+	LTR103_Mam	LTR/ERV1?	350	464	(11)	1259201
676	26.4	4.1	3.4	chr14	105070413	105070679	(1973039)	C	MLT1J	LTR/ERVL-MaLR	(202)	310	42	1259202
525	26.2	2.1	7.0	chr14	105070944	105071144	(1972574)	C	MER21C	LTR/ERVL	(168)	770	580	1259203
2304	9.8	0.0	2.9	chr14	105301857	105302172	(1741546)	+	AluSq2	SINE/Alu	3	309	(4)	1259494
14	19.9	6.6	3.1	chr14	105398207	105398267	(1645451)	+	(CGCCC)n	Simple_repeat	1	65	(0)	1259622
21	5.0	7.0	2.2	chr14	105415231	105415273	(1628445)	+	(CGCGGGG)n	Simple_repeat	1	46	(0)	1259656
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
233	28.2	9.9	3.0	chr15	29140054	29140221	(72850968)	+	LTR33A	LTR/ERVL	322	502	(18)	1275018
1512	11.3	0.4	8.4	chr15	29675466	29675739	(72315450)	+	AluJb	SINE/Alu	41	292	(20)	1275854
31	16.7	2.2	5.4	chr15	29822508	29822597	(72168592)	+	(GGCGG)n	Simple_repeat	1	92	(0)	1276071
18	29.9	3.7	2.7	chr15	30904028	30904134	(71087055)	+	(CGCGGC)n	Simple_repeat	1	111	(0)	1277837
664	26.8	11.8	11.3	chr15	31270627	31271123	(70720066)	C	LTR33B	LTR/ERVL	(3)	500	1	1278392
13	0.0	0.0	0.0	chr15	34101790	34101806	(67889383)	+	(AGC)n	Simple_repeat	1	17	(0)	1282290
13	17.6	3.3	8.1	chr15	34988252	34988311	(67002878)	+	(GCGGC)n	Simple_repeat	1	62	(0)	1283721
26	18.9	0.0	0.0	chr15	35019363	35019410	(66971779)	+	(C)n	Simple_repeat	1	48	(0)	1283798
402	28.6	7.5	0.6	chr15	35545733	35545894	(66445295)	+	MER5B	DNA/hAT-Charlie	2	175	(3)	1284508
1128	30.1	5.9	2.0	chr15	35835040	35835432	(66155757)	+	MLT1J1	LTR/ERVL-MaLR	31	439	(5)	1284896
15	20.6	0.0	6.0	chr15	38564665	38564714	(63426475)	+	(CGC)n	Simple_repeat	1	50	(0)	1288523
12	26.4	0.0	5.5	chr15	40323531	40323585	(61667604)	+	(GGCTCCC)n	Simple_repeat	1	55	(0)	1291015
74	22.4	2.8	4.2	chr15	40323703	40323954	(61667235)	+	(GGC)n	Simple_repeat	1	259	(0)	1291016
252	29.1	8.5	0.0	chr15	40694881	40694966	(61296223)	+	SVA_A	Retroposon/SVA	218	311	(1076)	1291741
528	14.0	0.0	0.0	chr15	40694892	40695002	(61296187)	C	FRAM	SINE/Alu	(81)	221	1	1291742
18	17.8	0.0	0.0	chr15	40807703	40807740	(61183449)	+	G-rich	Low_complexity	1	38	(0)	1291968
12	8.9	4.2	0.0	chr15	41116515	41116538	(60874651)	+	(AGG)n	Simple_repeat	1	25	(0)	1292536
271	15.7	8.8	2.4	chr15	41230387	41230471	(60760718)	+	Charlie16a	DNA/hAT-Charlie	138	228	(114)	1292844
14	13.1	0.0	0.0	chr15	41231305	41231330	(60759859)	+	(CCCT)n	Simple_repeat	1	26	(0)	1292845
19	15.8	0.0	4.3	chr15	41882218	41882263	(60108926)	+	(CCCCG)n	Simple_repeat	1	46	(0)	1294184
2184	11.4	1.0	0.0	chr15	42574647	42574945	(59416244)	C	AluSx	SINE/Alu	(10)	302	1	1295395
13	19.1	0.0	0.0	chr15	42575235	42575264	(59415925)	+	G-rich	Low_complexity	1	30	(0)	1295396
18	29.4	3.9	2.8	chr15	42736414	42736517	(59254672)	+	(GCCCCCG)n	Simple_repeat	1	108	(0)	1295666
15	25.2	1.7	3.3	chr15	42737122	42737181	(59254008)	+	(GGCGGC)n	Simple_repeat	1	61	(0)	1295667
270	26.4	3.2	2.1	chr15	43800976	43801068	(58190121)	C	L1ME5	LINE/L1	(16)	6178	6085	1297651
2338	7.5	1.4	0.3	chr15	43826580	43826872	(58164317)	C	AluSq2	SINE/Alu	(17)	296	1	1297708
14	22.5	0.0	2.3	chr15	43826950	43826992	(58164197)	+	(GCCCC)n	Simple_repeat	1	43	(0)	1297709
19	4.0	0.0	0.0	chr15	44537197	44537222	(57453967)	+	(GGC)n	Simple_repeat	1	26	(0)	1299120
847	26.3	8.9	6.1	chr15	48696742	48697076	(53294113)	+	LTR67B	LTR/ERVL	2	342	(278)	1305184
2391	11.0	2.4	1.1	chr15	48697077	48697452	(53293737)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1305185
1750	19.4	1.9	2.8	chr15	49078972	49079419	(52911770)	C	L1ME1	LINE/L1	(207)	5972	5537	1305761
430	29.4	5.0	3.5	chr15	49079618	49079871	(52911318)	+	MER115	DNA/hAT-Tip100	58	315	(378)	1305762
13	16.3	0.0	5.3	chr15	51751613	51751650	(50239539)	+	(GCCCCG)n	Simple_repeat	1	38	(0)	1310019
31	12.5	1.5	3.0	chr15	52528901	52528965	(49462224)	+	(GGCGG)n	Simple_repeat	1	66	(0)	1311446
32	22.2	0.0	0.0	chr15	52529060	52529132	(49462057)	+	(CGC)n	Simple_repeat	1	73	(0)	1311447
13	12.1	8.3	0.0	chr15	52679168	52679203	(49311986)	+	(CCGCT)n	Simple_repeat	1	39	(0)	1311700
18	0.0	0.0	0.0	chr15	55498594	55498613	(46492576)	+	(A)n	Simple_repeat	1	20	(0)	1315685
2496	6.3	0.3	1.9	chr15	55498624	55498939	(46492250)	+	AluSp	SINE/Alu	1	311	(2)	1315686
663	24.2	34.8	2.5	chr15	55764371	55764670	(46226519)	C	MLT1J2	LTR/ERVL-MaLR	(0)	444	38	1316140
2086	14.1	0.3	0.3	chr15	55764673	55764977	(46226212)	+	AluSz6	SINE/Alu	1	305	(7)	1316141
21	12.6	0.0	0.0	chr15	56733492	56733527	(45257662)	+	(GAG)n	Simple_repeat	1	36	(0)	1317505
12	14.1	3.0	2.9	chr15	56733745	56733777	(45257412)	+	(GCCAGG)n	Simple_repeat	1	34	(0)	1317506
12	24.0	4.5	0.0	chr15	56887288	56887331	(45103858)	+	(GCCGC)n	Simple_repeat	1	46	(0)	1317809
1590	21.1	13.9	6.9	chr15	59512498	59512672	(42478517)	+	L1ME3E	LINE/L1	5945	6152	(90)	1322205
636	23.2	2.1	0.0	chr15	59512895	59513032	(42478157)	C	MLT1J	LTR/ERVL-MaLR	(371)	141	1	1322208
236	23.2	5.7	2.4	chr15	59513033	59513116	(42478073)	+	L1ME3E	LINE/L1	6146	6232	(11)	1322205
531	24.6	3.3	4.4	chr15	60479377	60479559	(41511630)	+	MIR	SINE/MIR	72	252	(10)	1323869
263	30.3	14.2	2.8	chr15	61195023	61195202	(40795987)	C	Tigger15a	DNA/TcMar-Tigger	(212)	503	300	1324945
899	31.6	6.5	3.4	chr15	61752110	61752525	(40238664)	+	MLT1J1	LTR/ERVL-MaLR	7	436	(8)	1325856
13	16.8	0.0	5.4	chr15	63189497	63189533	(38801656)	+	(GGCGG)n	Simple_repeat	1	37	(0)	1328138
44	0.0	0.0	0.0	chr15	63833754	63833791	(38157398)	+	(CA)n	Simple_repeat	1	38	(0)	1329209
14	16.8	4.7	2.2	chr15	63870827	63870869	(38120320)	+	(CTCAGAG)n	Simple_repeat	1	45	(0)	1329297
348	25.9	13.5	2.5	chr15	63870875	63871033	(38120156)	C	MIRc	SINE/MIR	(25)	183	6	1329298
29	2.9	2.9	0.0	chr15	64703227	64703261	(37287928)	+	(GCC)n	Simple_repeat	1	36	(0)	1330988
11	21.5	4.4	2.1	chr15	64911857	64911901	(37079288)	+	G-rich	Low_complexity	1	47	(0)	1331492
12	22.8	4.2	2.0	chr15	65133170	65133217	(36857972)	+	(GGCCTC)n	Simple_repeat	1	50	(0)	1331959
12	23.3	4.4	0.0	chr15	65133443	65133487	(36857702)	+	(GCCGGTC)n	Simple_repeat	1	47	(0)	1331960
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
13	26.2	3.7	5.9	chr15	65377693	65377700	(36613489)	+	(CGG)n	Simple_repeat	1	12	(73)	1332490
20	10.1	0.0	0.0	chr15	65377701	65377732	(36613457)	+	(GCA)n	Simple_repeat	1	32	(0)	1332491
13	26.2	3.7	5.9	chr15	65377733	65377774	(36613415)	+	(CGG)n	Simple_repeat	13	85	(0)	1332490
329	31.2	11.4	0.8	chr15	65517022	65517261	(36473928)	+	MIRc	SINE/MIR	10	260	(8)	1332810
181	39.6	5.9	0.0	chr15	66497116	66497226	(35493963)	+	L2	LINE/L2	20	137	(3282)	1334817
247	35.3	5.5	0.8	chr15	66497390	66497509	(35493680)	+	MER5A	DNA/hAT-Charlie	63	188	(1)	1334818
800	28.2	10.0	0.7	chr15	66588865	66589171	(35402018)	C	MLT1J2	LTR/ERVL-MaLR	(45)	403	65	1335014
910	27.1	6.2	5.0	chr15	66938488	66938867	(35052322)	+	MLT1J	LTR/ERVL-MaLR	30	414	(98)	1335750
15	27.4	1.3	5.1	chr15	67066429	67066507	(34924682)	+	G-rich	Low_complexity	1	75	(0)	1336014
246	19.7	1.5	7.0	chr15	67820833	67820903	(34170286)	+	MIRb	SINE/MIR	122	188	(80)	1337182
1010	0.0	0.0	0.0	chr15	67839939	67840045	(34151144)	C	U6	snRNA	(0)	107	1	1337203
14	25.1	2.1	0.0	chr15	68229352	68229398	(33761791)	+	(CGCCC)n	Simple_repeat	1	48	(0)	1337960
1250	24.9	11.0	7.7	chr15	68536606	68537087	(33454102)	+	MLT1J	LTR/ERVL-MaLR	1	500	(12)	1338515
531	23.5	11.1	0.7	chr15	68537221	68537381	(33453808)	+	LTR33B	LTR/ERVL	55	225	(278)	1338516
1073	17.4	4.9	11.2	chr15	68537405	68537486	(33453703)	+	MER58A	DNA/hAT-Charlie	1	69	(155)	1338517
1837	9.6	2.2	0.0	chr15	68537487	68537747	(33453442)	C	L1PA10	LINE/L1	(0)	6168	5902	1338518
372	24.7	11.5	3.6	chr15	68613116	68613269	(33377920)	C	MLT1J	LTR/ERVL-MaLR	(338)	174	32	1338670
326	28.1	15.4	1.3	chr15	68844089	68844288	(33146901)	C	LTR33B	LTR/ERVL	(284)	219	24	1339163
285	32.6	7.2	2.8	chr15	69304944	69305054	(32686135)	+	MIR3	SINE/MIR	31	150	(58)	1339966
806	19.5	2.3	8.7	chr15	69305055	69305284	(32685905)	C	MER20	DNA/hAT-Charlie	(0)	219	5	1339967
285	32.6	7.2	2.8	chr15	69305285	69305317	(32685872)	+	MIR3	SINE/MIR	151	182	(26)	1339966
257	10.8	0.0	0.0	chr15	69958672	69958708	(32032481)	+	LTR67B	LTR/ERVL	82	118	(502)	1341216
700	29.8	8.6	3.9	chr15	69958678	69959065	(32032124)	+	MLT1J	LTR/ERVL-MaLR	102	509	(3)	1341217
557	29.2	2.3	4.9	chr15	69959070	69959332	(32031857)	+	L1ME3G	LINE/L1	542	797	(127)	1341215
985	20.9	11.6	1.4	chr15	70420151	70420437	(31570752)	C	L1ME3	LINE/L1	(7)	6155	5836	1342114
599	26.4	15.8	5.9	chr15	70420493	70420918	(31570271)	+	MLT1J	LTR/ERVL-MaLR	29	504	(8)	1342115
1815	23.4	9.3	1.4	chr15	71468620	71469061	(30522128)	C	MLT1J	LTR/ERVL-MaLR	(31)	481	1	1343777
427	26.2	11.3	6.6	chr15	71819771	71819921	(30171268)	+	LTR33B	LTR/ERVL	4	162	(341)	1344419
404	23.1	1.1	1.1	chr15	72209028	72209119	(29782070)	+	MIRc	SINE/MIR	76	167	(101)	1345077
1910	9.8	0.0	0.8	chr15	72209120	72209383	(29781806)	+	AluSx1	SINE/Alu	36	297	(15)	1345078
18	28.7	0.0	2.8	chr15	72230283	72230354	(29760835)	+	(CCCGCCG)n	Simple_repeat	1	69	(0)	1345107
32	23.8	0.0	7.2	chr15	72319477	72319601	(29671588)	+	G-rich	Low_complexity	1	125	(0)	1345246
31	24.4	2.6	6.4	chr15	72319943	72320095	(29671094)	+	G-rich	Low_complexity	1	157	(0)	1345247
1205	27.4	4.0	6.8	chr15	73794633	73795146	(28196043)	+	MLT1J	LTR/ERVL-MaLR	8	506	(6)	1347738
7547	15.9	17.7	2.2	chr15	73891377	73892853	(28098336)	+	MER52A	LTR/ERV1	1	1755	(0)	1347898
25	20.0	9.2	3.5	chr15	74120911	74121041	(27870148)	+	(TCTCCC)n	Simple_repeat	1	143	(0)	1348293
14	12.2	0.0	0.0	chr15	74130109	74130135	(27861054)	+	(GGCTG)n	Simple_repeat	1	27	(0)	1348310
16	23.9	0.0	0.0	chr15	74130202	74130236	(27860953)	+	G-rich	Low_complexity	1	35	(0)	1348311
13	13.1	0.0	0.0	chr15	74291623	74291647	(27699542)	+	(AGGC)n	Simple_repeat	1	25	(0)	1348595
480	23.6	10.0	3.4	chr15	74760662	74760810	(27230379)	C	LTR88b	LTR/Gypsy?	(649)	188	29	1349463
2128	13.4	0.0	1.3	chr15	74760812	74760981	(27230208)	C	AluSx	SINE/Alu	(9)	303	136	1349464
951	24.8	9.7	5.6	chr15	74889338	74889909	(27101280)	+	L2a	LINE/L2	2817	3426	(0)	1349709
21	0.0	0.0	0.0	chr15	75023306	75023328	(26967861)	+	(A)n	Simple_repeat	1	23	(0)	1350032
2088	13.3	0.0	1.7	chr15	75045929	75046228	(26944961)	+	AluJb	SINE/Alu	1	295	(17)	1350070
14	27.3	3.5	0.0	chr15	75578551	75578607	(26412582)	+	G-rich	Low_complexity	1	59	(0)	1351122
902	27.5	12.8	1.1	chr15	76168922	76169292	(25821897)	C	MLT1J	LTR/ERVL-MaLR	(8)	504	84	1352128
2345	8.8	0.0	0.0	chr15	77535681	77535974	(24455215)	C	AluSc8	SINE/Alu	(17)	294	1	1354226
872	27.9	9.1	9.3	chr15	77535975	77536434	(24454755)	+	MLT1J	LTR/ERVL-MaLR	46	505	(7)	1354224
313	27.7	5.1	0.9	chr15	78077913	78078025	(23913164)	+	L1ME2z	LINE/L1	6046	6163	(281)	1355151
19	20.0	0.9	11.1	chr15	78872783	78872889	(23118300)	+	G-rich	Low_complexity	1	108	(0)	1356790
14	5.0	0.0	0.0	chr15	81001815	81001835	(20989354)	+	(AAGG)n	Simple_repeat	1	21	(0)	1360520
2406	9.0	0.0	0.3	chr15	82539407	82539718	(19451471)	+	AluSz	SINE/Alu	2	312	(0)	1363030
12	14.1	0.0	8.1	chr15	82647385	82647421	(19343768)	+	(CCCG)n	Simple_repeat	1	37	(0)	1363212
652	24.2	17.7	2.6	chr15	85909660	85909926	(16081263)	C	MLT2F	LTR/ERVL	(0)	663	348	1368601
465	19.4	4.8	1.0	chr15	85909932	85910030	(16081159)	C	MLT2F	LTR/ERVL	(560)	103	1	1368601
239	30.3	12.6	0.0	chr15	87582175	87582250	(14408939)	+	MIR3	SINE/MIR	53	139	(69)	1371002
496	28.0	11.6	3.7	chr15	87582339	87582664	(14408525)	+	MLT1J2	LTR/ERVL-MaLR	65	419	(29)	1371003
1507	17.3	11.0	5.0	chr15	88061921	88062243	(13928946)	+	MER2	DNA/TcMar-Tigger	1	345	(0)	1371734
420	28.5	6.5	5.4	chr15	88062244	88062279	(13928910)	+	MIRb	SINE/MIR	162	192	(76)	1371733
1172	27.9	10.8	1.0	chr15	88062361	88062754	(13928435)	+	MLT1J	LTR/ERVL-MaLR	70	506	(6)	1371735
304	23.9	5.4	1.1	chr15	88814595	88814683	(13176506)	C	MER91C	DNA/hAT-Tip100	(32)	108	16	1373070
15	18.3	0.0	2.6	chr15	88895325	88895363	(13095826)	+	(CCCTGC)n	Simple_repeat	1	39	(0)	1373212
1732	15.2	5.5	0.0	chr15	88995120	88995395	(12995794)	+	AluJb	SINE/Alu	2	293	(19)	1373413
1208	23.5	5.5	5.8	chr15	89040911	89041343	(12949846)	+	MLT1H2	LTR/ERVL-MaLR	32	463	(26)	1373524
27806	3.0	0.4	0.1	chr15	89043904	89049907	(12941282)	C	L1PA3	LINE/L1	(1)	6154	133	1373533
12	13.7	6.2	0.0	chr15	89334445	89334476	(12656713)	+	(ACCCAC)n	Simple_repeat	1	34	(0)	1374039
11	28.2	0.0	2.2	chr15	89334706	89334750	(12656439)	+	(CCCCCGG)n	Simple_repeat	1	45	(0)	1374040
669	0.0	0.0	0.0	chr15	89335073	89335145	(12656044)	+	tRNA-Arg-CGA_	tRNA	1	73	(3)	1374041
195	28.6	3.1	0.0	chr15	89379951	89380013	(12611176)	C	MIRb	SINE/MIR	(176)	92	28	1374116
206	31.5	13.2	0.0	chr15	89442696	89442787	(12548402)	+	MIRc	SINE/MIR	119	224	(44)	1374220
1128	27.3	17.4	1.2	chr15	89457036	89457461	(12533728)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	3	1374249
65	0.0	0.0	0.0	chr15	89470497	89470551	(12520638)	+	(GT)n	Simple_repeat	1	55	(0)	1374261
310	31.5	18.9	0.5	chr15	89470719	89470938	(12520251)	+	L2b	LINE/L2	3012	3281	(94)	1374262
14	12.2	2.4	7.1	chr15	89751232	89751272	(12239917)	+	(GGC)n	Simple_repeat	1	42	(0)	1374804
217	33.6	3.6	5.3	chr15	89751532	89751644	(12239545)	+	MIRc	SINE/MIR	38	148	(120)	1374805
645	27.1	3.9	2.9	chr15	89800853	89801012	(12190177)	C	MIR	SINE/MIR	(63)	199	34	1374908
1302	12.3	2.2	0.0	chr15	90522054	90522232	(11468957)	C	AluJo	SINE/Alu	(128)	184	2	1376534
1083	25.2	0.7	5.5	chr15	90522234	90522496	(11468693)	C	MLT1J	LTR/ERVL-MaLR	(220)	292	44	1376535
2357	9.6	0.0	0.3	chr15	90522497	90522798	(11468391)	+	AluSx	SINE/Alu	1	301	(11)	1376536
377	23.6	1.9	0.0	chr15	90872535	90872640	(11118549)	+	Charlie15a	DNA/hAT-Charlie	117	224	(0)	1377288
389	24.9	18.8	1.1	chr15	90932171	90932349	(11058840)	+	MIRb	SINE/MIR	34	251	(17)	1377369
195	35.5	8.8	5.6	chr15	90932757	90932953	(11058236)	C	L2c	LINE/L2	(47)	3340	3137	1377370
680	25.7	15.7	2.7	chr15	91291572	91291969	(10699220)	C	MLT1J	LTR/ERVL-MaLR	(6)	506	5	1378057
298	26.4	1.1	6.2	chr15	92655988	92656084	(9335105)	C	MIRb	SINE/MIR	(41)	227	136	1380170
8593	6.5	18.9	0.3	chr15	92710300	92711583	(9279606)	C	LTR12C	LTR/ERV1	(0)	1579	2	1380272
310	33.6	2.4	4.3	chr15	92711584	92711647	(9279542)	C	MIRb	SINE/MIR	(198)	70	8	1380271
1482	22.5	6.8	4.5	chr15	92747098	92747543	(9243646)	C	MLT1C	LTR/ERVL-MaLR	(5)	462	6	1380353
1444	28.9	10.4	5.0	chr15	98207560	98208181	(3783008)	C	MLT2F	LTR/ERVL	(3)	660	1	1388269
770	29.2	6.7	10.3	chr15	98241106	98241571	(3749618)	+	MLT1J	LTR/ERVL-MaLR	1	448	(64)	1388319
1604	24.7	9.6	0.7	chr15	98888741	98889204	(3101985)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	3	1389291
13	15.4	5.6	0.0	chr15	99105697	99105732	(2885457)	+	(CCGCCG)n	Simple_repeat	1	38	(0)	1389634
717	19.3	7.6	0.6	chr15	101046389	101046560	(944629)	C	MER5A	DNA/hAT-Charlie	(0)	189	5	1392261
463	22.1	5.5	9.4	chr15	101046588	101046757	(944432)	+	MER5B	DNA/hAT-Charlie	15	177	(1)	1392262
603	32.5	17.5	1.9	chr16	52803	53424	(90284921)	C	L2a	LINE/L2	(135)	3291	2528	1394121
325	30.8	4.4	2.3	chr16	229684	229816	(90108529)	+	MIR	SINE/MIR	56	191	(71)	1394420
12	19.4	4.7	2.2	chr16	401560	401602	(89936743)	+	(GGAGCCA)n	Simple_repeat	1	45	(0)	1394694
13	25.8	4.7	4.5	chr16	636269	636353	(89701992)	+	(CCGCGG)n	Simple_repeat	1	89	(0)	1395036
11	6.7	5.4	7.7	chr16	641936	641972	(89696373)	+	(CCGGCGG)n	Simple_repeat	1	39	(0)	1395043
16	8.6	0.0	10.9	chr16	642051	642096	(89696249)	+	G-rich	Low_complexity	1	46	(0)	1395044
17	4.0	0.0	3.6	chr16	642259	642286	(89696059)	+	(GCCCG)n	Simple_repeat	1	28	(0)	1395045
15	18.9	2.3	2.2	chr16	668148	668191	(89670154)	+	(GGTCCG)n	Simple_repeat	1	45	(0)	1395064
13	28.1	0.0	4.9	chr16	668250	668310	(89670035)	+	G-rich	Low_complexity	1	61	(0)	1395065
442	25.8	1.5	1.5	chr16	1178506	1178639	(89159706)	+	MLT1B	LTR/ERVL-MaLR	213	346	(44)	1395572
17	10.7	7.1	2.2	chr16	1351946	1351987	(88986358)	+	(GCG)n	Simple_repeat	1	45	(0)	1395772
1058	16.2	2.3	0.0	chr16	1575407	1575573	(88762772)	+	AluJr	SINE/Alu	135	305	(7)	1396105
4627	19.1	6.3	3.1	chr16	1575933	1576003	(88762342)	+	Tigger2b_Pri	DNA/TcMar-Tigger	10	79	(989)	1396106
2371	10.9	0.0	0.0	chr16	1576004	1576305	(88762040)	+	AluSx	SINE/Alu	1	302	(10)	1396107
13	24.4	2.2	8.6	chr16	1678512	1678602	(88659743)	+	(GCCGAG)n	Simple_repeat	1	93	(0)	1396237
13	20.3	3.6	5.2	chr16	1678843	1678898	(88659447)	+	(GTGGCC)n	Simple_repeat	1	58	(0)	1396238
4838	8.3	0.4	11.7	chr16	1943652	1943800	(88394545)	+	LTR8	LTR/ERV1	1	145	(546)	1396686
242	27.9	17.2	0.9	chr16	1959282	1959393	(88378952)	+	L2a	LINE/L2	3267	3400	(26)	1396716
274	34.4	8.6	0.8	chr16	1960842	1960970	(88377375)	+	MIRb	SINE/MIR	120	259	(9)	1396719
17	17.0	2.5	0.0	chr16	1965349	1965388	(88372957)	+	(CTGACCC)n	Simple_repeat	1	41	(0)	1396722
181	33.6	5.0	5.0	chr16	1965588	1965706	(88372639)	C	MIRb	SINE/MIR	(91)	177	59	1396723
28	34.0	1.5	0.8	chr16	1983983	1984112	(88354233)	+	(CCGGCC)n	Simple_repeat	1	132	(0)	1396745
14	20.6	0.0	8.5	chr16	2019929	2019942	(88318403)	+	(GCTGCC)n	Simple_repeat	1	58	(0)	1396801
19	20.9	0.0	0.0	chr16	2019943	2019986	(88318359)	+	(GCT)n	Simple_repeat	1	44	(0)	1396802
12	13.1	2.7	5.3	chr16	2047761	2047797	(88290548)	+	(CGGCTC)n	Simple_repeat	1	38	(0)	1396835
13	19.5	0.0	2.7	chr16	2048028	2048064	(88290281)	+	(GCGCG)n	Simple_repeat	1	37	(0)	1396836
20	0.0	0.0	0.0	chr16	2149304	2149325	(88189020)	+	(T)n	Simple_repeat	1	22	(0)	1396961
660	16.7	1.8	0.0	chr16	2151107	2151214	(88187131)	C	AluJo	SINE/Alu	(11)	301	192	1396962
194	16.7	2.7	0.0	chr16	2151274	2151309	(88187036)	C	MIR	SINE/MIR	(110)	152	116	1396963
27	18.1	8.6	3.6	chr16	2155886	2155938	(88182407)	+	G-rich	Low_complexity	1	50	(0)	1396968
15	24.9	0.0	3.9	chr16	2268061	2268111	(88070234)	+	(CCG)n	Simple_repeat	1	51	(0)	1397131
2133	5.5	0.7	10.9	chr16	2269110	2269439	(88068906)	C	AluSx3	SINE/Alu	(15)	296	1	1397132
13	11.1	9.3	5.1	chr16	2752706	2752759	(87585586)	+	(GAGGC)n	Simple_repeat	1	59	(0)	1397879
18	17.8	0.0	4.2	chr16	3046537	3046584	(87291761)	+	(GCCCG)n	Simple_repeat	1	48	(0)	1398400
2266	10.4	1.0	0.0	chr16	3124961	3125258	(87213087)	C	AluSx1	SINE/Alu	(11)	301	1	1398544
672	0.0	0.0	0.0	chr16	3150674	3150746	(87187599)	+	tRNA-Arg-CGG	tRNA	1	73	(3)	1398597
217	31.4	14.5	5.0	chr16	3264843	3265003	(87073342)	C	L2a	LINE/L2	(1)	3425	3208	1398855
234	30.3	2.9	0.0	chr16	3414348	3414413	(86923932)	C	L2a	LINE/L2	(13)	3413	3346	1399130
2170	10.4	0.0	8.0	chr16	3414454	3414791	(86923554)	+	AluSx	SINE/Alu	1	311	(1)	1399131
18	19.7	2.7	6.7	chr16	3717380	3717452	(86620893)	+	(GCCC)n	Simple_repeat	1	75	(0)	1399696
12	22.3	0.0	7.4	chr16	3717424	3717477	(86620868)	+	(CCGGCG)n	Simple_repeat	1	54	(0)	1399697
189	22.0	0.0	3.9	chr16	4271706	4271757	(86066588)	+	AmnSINE1	SINE/5S-Deu-L2	76	125	(450)	1400801
19	18.5	5.5	0.0	chr16	4425753	4425807	(85912538)	+	(GCGCGT)n	Simple_repeat	1	58	(0)	1401122
21	15.3	6.7	1.6	chr16	4614800	4614859	(85723486)	+	(CGCCTCC)n	Simple_repeat	1	64	(0)	1401530
12	23.0	0.0	4.5	chr16	4614903	4614946	(85723399)	+	(CGCCT)n	Simple_repeat	1	44	(0)	1401531
26	12.6	3.9	0.0	chr16	4693887	4693938	(85644407)	+	G-rich	Low_complexity	1	54	(0)	1401668
16	15.1	6.8	0.0	chr16	4694053	4694096	(85644249)	+	(GGCCTG)n	Simple_repeat	1	47	(0)	1401669
252	10.8	0.0	0.0	chr16	4767412	4767448	(85570897)	C	MLT1D	LTR/ERVL-MaLR	(224)	281	245	1401813
1460	9.6	19.4	0.0	chr16	4767449	4767677	(85570668)	+	AluSp	SINE/Alu	3	286	(27)	1401814
16	17.4	4.3	2.0	chr16	4768720	4768766	(85569579)	+	(CGCCC)n	Simple_repeat	1	49	(0)	1401819
227	29.1	8.1	0.0	chr16	4769034	4769112	(85569233)	+	MIRb	SINE/MIR	94	179	(89)	1401820
20	18.6	4.0	8.6	chr16	4937064	4937164	(85401181)	+	(GGC)n	Simple_repeat	1	105	(0)	1402175
460	30.3	4.8	3.6	chr16	4937584	4937791	(85400554)	+	MIRb	SINE/MIR	20	231	(37)	1402176
530	26.0	2.4	0.0	chr16	5046838	5046960	(85291385)	C	MER94	DNA/hAT-Blackjack	(5)	129	4	1402456
726	26.5	30.0	4.1	chr16	5046966	5047372	(85290973)	+	LTR33A	LTR/ERVL	1	514	(6)	1402457
567	26.8	18.8	6.0	chr16	5208005	5208389	(85129956)	C	MLT1J2	LTR/ERVL-MaLR	(2)	446	1	1402818
409	36.2	7.1	2.7	chr16	5208390	5208527	(85129818)	C	L1MC	LINE/L1	(3589)	2557	2420	1402817
1526	25.6	6.9	1.2	chr16	5319676	5320082	(85018263)	C	MLT1J2	LTR/ERVL-MaLR	(2)	446	15	1403018
256	36.6	4.4	1.9	chr16	5320166	5320321	(85018024)	C	L2c	LINE/L2	(171)	3216	3057	1403017
552	25.5	11.9	4.4	chr16	9052996	9053356	(81284989)	C	MLT1J2	LTR/ERVL-MaLR	(36)	412	20	1410460
841	33.4	5.9	6.7	chr16	9053374	9053615	(81284730)	+	L2a	LINE/L2	2937	3188	(238)	1410461
1027	27.0	9.7	6.4	chr16	9078898	9079336	(81259009)	C	MLT1J	LTR/ERVL-MaLR	(50)	462	8	1410539
318	27.2	9.8	0.0	chr16	9139894	9139985	(81198360)	+	MIR	SINE/MIR	62	163	(99)	1410657
1061	21.9	13.4	4.5	chr16	9139986	9140363	(81197982)	+	MLT1J	LTR/ERVL-MaLR	1	417	(95)	1410658
515	23.2	1.7	16.1	chr16	9318845	9319049	(81019296)	C	MLT1J	LTR/ERVL-MaLR	(248)	264	90	1411112
1416	22.5	7.7	3.1	chr16	9389518	9389952	(80948393)	+	MLT1F2	LTR/ERVL-MaLR	84	560	(0)	1411256
433	23.0	10.0	2.2	chr16	9389964	9390101	(80948244)	C	MLT1J	LTR/ERVL-MaLR	(332)	180	31	1411257
16	20.9	0.0	0.0	chr16	10182879	10182911	(80155434)	+	(GT)n	Simple_repeat	1	33	(0)	1412844
2219	10.6	0.7	0.0	chr16	10300644	10300935	(80037410)	C	AluSz	SINE/Alu	(6)	306	13	1413142
646	29.3	11.8	4.0	chr16	10300995	10301346	(80036999)	+	MLT1J	LTR/ERVL-MaLR	92	474	(38)	1413143
331	30.1	3.5	4.2	chr16	10382286	10382427	(79955918)	C	LTR33B	LTR/ERVL	(326)	177	37	1413396
907	27.9	4.3	4.8	chr16	10382438	10382958	(79955387)	C	MLT1E2	LTR/ERVL-MaLR	(0)	505	1	1413397
12	14.9	4.9	4.7	chr16	10580554	10580594	(79757751)	+	(GCTG)n	Simple_repeat	1	43	(0)	1413754
13	33.0	1.7	0.0	chr16	10944605	10944664	(79393681)	+	(CCG)n	Simple_repeat	1	61	(0)	1414616
490	30.7	0.0	4.4	chr16	11396046	11396205	(78942140)	C	MIR	SINE/MIR	(2)	260	108	1415575
803	21.9	19.8	0.4	chr16	11440241	11440492	(78897853)	+	MLT1J2	LTR/ERVL-MaLR	15	327	(121)	1415679
1563	27.0	4.0	4.7	chr16	11642793	11643230	(78695115)	+	MLT1J	LTR/ERVL-MaLR	5	438	(74)	1416189
13	22.7	0.0	0.0	chr16	11915898	11915929	(78422416)	+	(GCG)n	Simple_repeat	1	32	(0)	1416786
255	28.2	5.8	5.1	chr16	12311857	12311994	(78026351)	C	MLT1J	LTR/ERVL-MaLR	(48)	464	326	1417664
626	25.1	4.3	2.7	chr16	12312013	12312196	(78026149)	C	MLT1J	LTR/ERVL-MaLR	(314)	198	12	1417664
19	19.7	0.0	2.1	chr16	12803887	12803934	(77534411)	+	G-rich	Low_complexity	1	48	(0)	1418653
646	18.5	5.6	7.2	chr16	12804069	12804249	(77534096)	+	MER53	DNA/hAT	2	179	(14)	1418654
1802	21.9	4.5	6.2	chr16	12892852	12893026	(77445319)	C	MLT1D	LTR/ERVL-MaLR	(321)	184	14	1418898
542	28.6	8.1	3.0	chr16	12893158	12893391	(77444954)	+	MLT1J1	LTR/ERVL-MaLR	4	250	(194)	1418900
401	15.2	0.0	0.0	chr16	12893406	12893471	(77444874)	+	MLT1J1	LTR/ERVL-MaLR	380	445	(3)	1418900
552	22.7	0.0	0.9	chr16	13168423	13168533	(77169812)	C	MLT1J1	LTR/ERVL-MaLR	(284)	160	51	1419541
14	9.3	2.5	7.3	chr16	15056033	15056072	(75282273)	+	(GCCGCCC)n	Simple_repeat	1	41	(0)	1423502
1750	11.9	6.6	0.4	chr16	15887826	15888093	(74450252)	+	AluJr	SINE/Alu	15	300	(12)	1425477
258	29.1	4.8	0.0	chr16	15888109	15888187	(74450158)	+	MIRb	SINE/MIR	163	245	(23)	1425478
688	23.4	12.5	2.7	chr16	15970095	15970501	(74367844)	C	MLT1J	LTR/ERVL-MaLR	(16)	496	5	1425733
180	31.5	0.0	0.0	chr16	15970513	15970566	(74367779)	C	L2b	LINE/L2	(290)	3085	3032	1425732
712	23.2	4.6	7.1	chr16	17101414	17101948	(73236397)	C	MLT1J2	LTR/ERVL-MaLR	(0)	444	11	1428320
274	32.9	17.1	1.9	chr16	17572232	17572488	(72765857)	C	MLT1J	LTR/ERVL-MaLR	(109)	403	100	1429403
13	23.9	0.0	0.0	chr16	18926348	18926382	(71411963)	+	GA-rich	Low_complexity	1	35	(0)	1432181
1361	6.1	0.0	0.0	chr16	19991439	19991603	(70346742)	+	AluYc	SINE/Alu	135	299	(0)	1434868
635	22.6	21.6	1.1	chr16	19991668	19991939	(70346406)	+	MLT2F	LTR/ERVL	1	329	(334)	1434869
727	16.7	9.2	2.3	chr16	19991975	19992146	(70346199)	+	MLT2F	LTR/ERVL	426	610	(53)	1434869
31	0.0	0.0	0.0	chr16	20073253	20073279	(70265066)	+	(CA)n	Simple_repeat	1	27	(0)	1435074
22	24.3	0.0	1.7	chr16	21501986	21502045	(68836300)	+	GA-rich	Low_complexity	1	60	(0)	1438014
12	24.3	0.0	0.0	chr16	21502176	21502209	(68836136)	+	GA-rich	Low_complexity	1	34	(0)	1438015
15	23.1	1.9	3.6	chr16	21599621	21599674	(68738671)	+	(GGC)n	Simple_repeat	1	55	(0)	1438246
14	25.3	1.6	4.8	chr16	21599902	21599963	(68738382)	+	G-rich	Low_complexity	1	63	(0)	1438247
734	0.0	0.0	0.0	chr16	22297140	22297221	(68041124)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1439785
23	22.6	1.5	1.0	chr16	22436813	22436867	(67901478)	+	A-rich	Low_complexity	1	55	(0)	1440062
12	23.9	0.0	0.0	chr16	22437078	22437112	(67901233)	+	(CCTCCT)n	Simple_repeat	1	35	(0)	1440063
22	24.3	0.0	1.7	chr16	22437242	22437301	(67901044)	+	(TCC)n	Simple_repeat	1	60	(0)	1440064
371	32.2	0.0	0.0	chr16	23026625	23026739	(67311606)	+	MIRb	SINE/MIR	113	227	(41)	1441322
36	0.0	4.9	0.0	chr16	23027135	23027175	(67311170)	+	(TTTCTTTT)n	Simple_repeat	1	43	(0)	1441323
17	17.4	3.5	5.1	chr16	23149397	23149453	(67188892)	+	(AGCG)n	Simple_repeat	1	59	(0)	1441521
1986	21.2	3.4	2.3	chr16	23274874	23275312	(67063033)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	5	1441854
364	35.8	9.3	4.8	chr16	23275313	23276005	(67062340)	C	L2c	LINE/L2	(214)	3173	2418	1441853
21	20.7	2.5	6.0	chr16	23302350	23302430	(67035915)	+	(GCC)n	Simple_repeat	1	83	(0)	1441939
12	18.8	5.8	3.6	chr16	23558049	23558100	(66780245)	+	(CGGCAGC)n	Simple_repeat	1	55	(0)	1442575
12	29.9	0.0	5.9	chr16	23596346	23596413	(66741932)	+	(CGG)n	Simple_repeat	1	68	(0)	1442647
801	28.3	9.1	4.3	chr16	24482572	24482966	(65855379)	+	MLT1J2	LTR/ERVL-MaLR	29	444	(0)	1444797
909	23.4	11.9	5.1	chr16	25030885	25031312	(65307033)	C	L1ME3F	LINE/L1	(6)	6237	5777	1446053
245	23.4	3.5	0.0	chr16	25031334	25031405	(65306940)	+	MIRb	SINE/MIR	188	257	(5)	1446054
16	21.6	0.0	0.0	chr16	25257910	25257941	(65080404)	+	G-rich	Low_complexity	1	32	(0)	1446590
27	26.2	2.9	2.8	chr16	25692620	25692724	(64645621)	+	(CGC)n	Simple_repeat	1	108	(0)	1447514
829	28.2	7.9	1.1	chr16	25716277	25716548	(64621797)	+	MLT1J	LTR/ERVL-MaLR	65	356	(156)	1447559
733	29.3	9.1	3.2	chr16	26391857	26392135	(63946210)	C	MLT1J2	LTR/ERVL-MaLR	(151)	297	1	1448906
1028	30.7	5.4	3.0	chr16	26392140	26392682	(63945663)	+	L1ME3G	LINE/L1	85	641	(283)	1448907
959	28.7	7.4	2.4	chr16	26788013	26788394	(63549951)	+	MLT1J2	LTR/ERVL-MaLR	6	408	(40)	1449692
1607	17.0	1.2	0.0	chr16	27982086	27982338	(62356007)	+	AluJr	SINE/Alu	1	256	(56)	1452392
515	28.9	9.7	13.6	chr16	27982339	27982564	(62355781)	+	MLT1J2	LTR/ERVL-MaLR	59	301	(147)	1452393
2272	16.5	6.3	0.0	chr16	27982565	27982963	(62355382)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1452394
705	26.9	4.4	0.0	chr16	28303994	28304209	(62034136)	+	L1ME4b	LINE/L1	315	540	(352)	1453146
586	21.0	12.7	1.1	chr16	28304396	28304576	(62033769)	+	MIRb	SINE/MIR	20	225	(43)	1453147
20	23.8	1.4	4.0	chr16	28554226	28554299	(61784046)	+	G-rich	Low_complexity	1	75	(0)	1453837
11	9.7	8.6	2.6	chr16	28879981	28880015	(61458330)	+	(GCCCCT)n	Simple_repeat	1	38	(0)	1454637
1720	15.2	5.6	0.0	chr16	28950317	28950585	(61387760)	C	AluSz	SINE/Alu	(25)	287	3	1454832
13	11.7	3.6	0.0	chr16	28950961	28950988	(61387357)	+	(GGCGA)n	Simple_repeat	1	29	(0)	1454833
1139	18.5	0.0	0.0	chr16	28983494	28983666	(61354679)	C	AluJb	SINE/Alu	(4)	308	136	1454914
16	12.1	0.0	0.0	chr16	28983993	28984020	(61354325)	+	(TCTG)n	Simple_repeat	1	28	(0)	1454915
13	23.9	0.0	0.0	chr16	29595282	29595316	(60743029)	+	GA-rich	Low_complexity	1	35	(0)	1456055
664	31.2	7.7	4.3	chr16	29645767	29646117	(60692228)	+	MLT1J2	LTR/ERVL-MaLR	1	364	(84)	1456179
1240	23.5	11.2	1.1	chr16	29675985	29676362	(60661983)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	28	1456272
23	10.9	0.0	2.4	chr16	29691994	29692035	(60646310)	+	(GTGTGC)n	Simple_repeat	1	42	(0)	1456321
37	0.0	2.6	0.0	chr16	29692249	29692286	(60646059)	+	(TTAT)n	Simple_repeat	1	39	(0)	1456322
228	34.8	5.2	1.1	chr16	29747158	29747250	(60591095)	C	MIR3	SINE/MIR	(35)	173	77	1456465
2230	9.5	3.6	0.0	chr16	29747309	29747604	(60590741)	+	AluSx	SINE/Alu	1	307	(5)	1456466
215	27.7	15.1	1.0	chr16	29791036	29791137	(60547208)	+	MIR1_Amn	SINE/MIR	39	157	(73)	1456580
774	28.4	4.9	0.0	chr16	30094344	30094558	(60243787)	+	MIR	SINE/MIR	37	262	(0)	1457250
13	25.3	2.0	2.0	chr16	30585555	30585603	(59752742)	+	G-rich	Low_complexity	1	50	(0)	1458400
41	21.8	0.0	0.0	chr16	30659836	30659925	(59678420)	+	GA-rich	Low_complexity	1	90	(0)	1458577
214	28.1	3.4	0.0	chr16	30697877	30697933	(59640412)	+	MIR1_Amn	SINE/MIR	39	97	(133)	1458686
18	7.7	0.0	0.0	chr16	30698185	30698212	(59640133)	+	(GTG)n	Simple_repeat	1	28	(0)	1458687
12	28.1	3.9	0.0	chr16	30775721	30775772	(59562573)	+	(CTGGCG)n	Simple_repeat	1	54	(0)	1458832
187	8.0	0.0	0.0	chr16	30897313	30897337	(59441008)	+	MIR1_Amn	SINE/MIR	126	150	(80)	1459129
1904	9.4	2.2	1.5	chr16	30902699	30902965	(59435380)	C	AluJb	SINE/Alu	(32)	280	12	1459151
48	17.2	3.7	6.5	chr16	30923456	30923618	(59414727)	+	GA-rich	Low_complexity	1	169	(0)	1459205
283	27.2	9.8	6.4	chr16	31034547	31034717	(59303628)	C	MIR3	SINE/MIR	(33)	175	3	1459457
2516	6.9	0.0	0.0	chr16	31095050	31095354	(59242991)	+	AluSx	SINE/Alu	1	305	(7)	1459584
15	18.7	4.3	4.2	chr16	31142906	31142951	(59195394)	+	(GC)n	Simple_repeat	1	48	(0)	1459691
2337	6.0	0.0	0.0	chr16	31442302	31442618	(58895727)	C	AluSx4	SINE/Alu	(0)	310	1	1460321
439	22.6	0.0	0.0	chr16	31443281	31443364	(58894981)	C	MER96B	DNA/hAT-Tip100	(3)	414	331	1460322
15	20.6	3.3	4.8	chr16	46884349	46884409	(43453936)	+	G-rich	Low_complexity	1	63	(0)	1466256
1125	27.2	6.2	1.4	chr16	48099532	48099949	(42238396)	+	MLT1J2	LTR/ERVL-MaLR	2	440	(8)	1468126
1044	27.8	6.8	6.4	chr16	48139590	48140089	(42198256)	+	MLT1J	LTR/ERVL-MaLR	7	508	(4)	1468183
1190	24.9	14.0	1.3	chr16	49009317	49009703	(41328642)	+	MLT1J2	LTR/ERVL-MaLR	1	444	(4)	1469832
426	15.8	2.6	0.0	chr16	49158048	49158123	(41180222)	C	MER96	DNA/hAT-Tip100	(0)	175	98	1470085
579	29.9	9.4	0.2	chr16	50578044	50578418	(39759927)	C	MLT1J2	LTR/ERVL-MaLR	(65)	383	1	1472777
965	23.9	5.1	2.8	chr16	51053704	51054127	(39284218)	C	MLT1J	LTR/ERVL-MaLR	(13)	499	20	1473662
2310	18.6	12.0	1.9	chr16	52597078	52597640	(37740705)	+	L1MDb	LINE/L1	593	1219	(5190)	1476249
275	13.6	0.0	2.2	chr16	52597734	52597778	(37740567)	C	MLT1J	LTR/ERVL-MaLR	(370)	142	99	1476247
2114	12.2	0.7	0.0	chr16	53022722	53023017	(37315328)	+	AluSq	SINE/Alu	3	300	(13)	1477030
16	11.7	5.1	2.4	chr16	53434429	53434486	(36903859)	+	(GGCG)n	Simple_repeat	1	59	(0)	1477844
14	22.5	0.0	0.0	chr16	53434604	53434654	(36903691)	+	GA-rich	Low_complexity	1	51	(0)	1477845
1268	21.6	6.8	3.3	chr16	54242121	54242546	(36095799)	C	MLT1J2	LTR/ERVL-MaLR	(3)	445	4	1479145
1580	16.8	7.6	0.0	chr16	54242679	54242958	(36095387)	+	AluJb	SINE/Alu	1	303	(9)	1479146
873	26.5	11.8	0.7	chr16	54315859	54316249	(36022096)	+	LTR16B	LTR/ERVL	6	476	(4)	1479301
580	25.2	0.0	0.0	chr16	54316232	54316358	(36021987)	C	MLT1J1	LTR/ERVL-MaLR	(317)	127	1	1479300
258	19.5	12.7	0.2	chr16	54316364	54316442	(36021903)	+	MIRb	SINE/MIR	175	262	(0)	1479299
2279	8.4	0.0	2.4	chr16	56479189	56479485	(33858860)	+	AluSx	SINE/Alu	1	290	(22)	1483117
876	19.6	21.6	2.5	chr16	56479592	56480032	(33858313)	+	MLT2F	LTR/ERVL	3	565	(98)	1483118
15	3.8	0.0	9.1	chr16	56730007	56730039	(33608306)	+	(GCCCC)n	Simple_repeat	1	33	(0)	1483652
15	17.6	0.0	6.7	chr16	56730567	56730611	(33607734)	+	(CCTG)n	Simple_repeat	1	45	(0)	1483653
462	28.9	10.5	8.3	chr16	57154566	57154769	(33183576)	C	MIRb	SINE/MIR	(27)	241	33	1484464
387	28.4	16.6	1.0	chr16	57462315	57462527	(32875818)	C	L1ME3G	LINE/L1	(344)	580	317	1485115
313	33.8	7.3	0.0	chr16	58025103	58025241	(32313104)	C	MIRb	SINE/MIR	(108)	160	11	1486283
13	18.2	0.0	0.0	chr16	58025339	58025369	(32312976)	+	(ATATAT)n	Simple_repeat	1	31	(0)	1486284
544	28.7	9.7	3.9	chr16	58236215	58236696	(32101649)	C	LTR33	LTR/ERVL	(2)	513	1	1486703
304	5.4	0.0	0.0	chr16	66125396	66125432	(24212913)	+	tRNA-Ile-ATT	tRNA	1	37	(40)	1499138
231	25.6	9.9	0.0	chr16	66125580	66125661	(24212684)	C	L1M6	LINE/L1	(5846)	650	560	1499139
15	17.2	2.4	2.4	chr16	66552529	66552569	(23785776)	+	(GCGCGT)n	Simple_repeat	1	42	(0)	1499952
981	16.0	7.7	0.0	chr16	67021207	67021375	(23316970)	+	AluJo	SINE/Alu	129	311	(1)	1500900
31	8.1	1.8	3.5	chr16	67021376	67021432	(23316913)	+	(GAAA)n	Simple_repeat	1	58	(0)	1500901
2356	10.6	0.3	0.0	chr16	67021706	67022007	(23316338)	C	AluSx	SINE/Alu	(8)	304	2	1500902
13	21.6	4.7	4.5	chr16	67279303	67279366	(23058979)	+	G-rich	Low_complexity	1	67	(0)	1501369
15	13.8	0.0	2.9	chr16	67279460	67279493	(23058852)	+	(GGCGC)n	Simple_repeat	1	34	(0)	1501370
17	20.1	0.0	4.1	chr16	67562048	67562096	(22776249)	+	(GGCCG)n	Simple_repeat	1	49	(0)	1501889
20	26.9	0.0	2.9	chr16	67562427	67562496	(22775849)	+	(CCCCT)n	Simple_repeat	1	70	(0)	1501890
12	28.1	1.9	1.9	chr16	67562503	67562555	(22775790)	+	(GCGCCG)n	Simple_repeat	1	54	(0)	1501891
12	25.5	0.0	0.0	chr16	67563295	67563331	(22775014)	+	(CCTG)n	Simple_repeat	1	37	(0)	1501894
342	32.8	7.6	5.5	chr16	67834041	67834221	(22504124)	+	MIRb	SINE/MIR	84	268	(0)	1502444
16	17.4	0.0	4.7	chr16	67842337	67842379	(22495966)	+	(GCGG)n	Simple_repeat	1	43	(0)	1502467
352	33.1	3.1	0.7	chr16	67968823	67968977	(22369368)	+	MIRb	SINE/MIR	88	246	(22)	1502652
16	0.0	0.0	0.0	chr16	68085196	68085212	(22253133)	+	(G)n	Simple_repeat	1	17	(0)	1502901
12	27.1	0.0	3.9	chr16	68264971	68265022	(22073323)	+	(TGTGAC)n	Simple_repeat	1	52	(0)	1503254
13	8.4	10.0	2.3	chr16	68265179	68265218	(22073127)	+	(TGGAGCGC)n	Simple_repeat	1	44	(0)	1503255
185	20.0	2.8	0.0	chr16	68448974	68449008	(21889337)	+	MIR3	SINE/MIR	112	147	(61)	1503546
2594	5.5	0.3	0.3	chr16	69386211	69386520	(20951825)	+	AluSp	SINE/Alu	1	310	(3)	1505677
757	19.6	0.0	0.8	chr16	69755186	69755318	(20583027)	+	FLAM_A	SINE/Alu	1	132	(10)	1506494
2193	8.0	0.0	2.1	chr16	70426182	70426499	(19911846)	C	AluSx	SINE/Alu	(0)	312	1	1507957
24	19.8	0.0	0.0	chr16	70454251	70454296	(19884049)	+	A-rich	Low_complexity	1	46	(0)	1508029
522	30.1	10.6	0.0	chr16	70582420	70582605	(19755740)	+	MIRb	SINE/MIR	12	219	(49)	1508296
593	4.1	0.0	0.0	chr16	71426493	71426565	(18911780)	+	tRNA-Met	tRNA	1	73	(3)	1509672
1222	18.6	7.5	0.4	chr16	71426948	71427184	(18911161)	+	AluJb	SINE/Alu	1	255	(57)	1509673
16	0.0	0.0	0.0	chr16	71467961	71467977	(18870368)	+	(G)n	Simple_repeat	1	17	(0)	1509741
2183	10.9	1.0	0.0	chr16	71468075	71468359	(18869986)	C	AluSq2	SINE/Alu	(25)	288	1	1509742
17	13.1	0.0	0.0	chr16	71626455	71626480	(18711865)	+	(GA)n	Simple_repeat	1	26	(0)	1510047
18	20.7	4.2	4.0	chr16	74606844	74606915	(15731430)	+	(TGCTGA)n	Simple_repeat	1	75	(0)	1515037
721	26.3	10.0	1.4	chr16	74695887	74696299	(15642046)	+	MLT1J2	LTR/ERVL-MaLR	4	428	(20)	1515244
16	10.5	3.2	0.0	chr16	75250885	75250915	(15087430)	+	(CGCTCC)n	Simple_repeat	1	32	(0)	1516382
188	20.3	8.0	6.8	chr16	75251092	75251165	(15087180)	C	MIR3	SINE/MIR	(53)	155	81	1516383
15719	14.4	3.1	4.0	chr16	75433679	75434907	(14903438)	+	Tigger17	DNA/TcMar-Tigger	1	1199	(1474)	1516787
21	27.4	5.8	2.4	chr16	75566366	75566485	(14771860)	+	(CCGCTG)n	Simple_repeat	1	127	(0)	1517068
13	8.8	0.0	3.9	chr16	77788753	77788778	(12549567)	+	(CGG)n	Simple_repeat	1	26	(0)	1520488
1081	27.6	3.3	0.0	chr16	78796248	78796540	(11541805)	C	MLT1J2	LTR/ERVL-MaLR	(132)	316	14	1522427
297	21.6	16.9	2.0	chr16	80515539	80515657	(9822688)	+	MLT1L	LTR/ERVL-MaLR	35	212	(300)	1525426
235	29.4	1.4	0.0	chr16	80515705	80515772	(9822573)	C	L2	LINE/L2	(345)	3074	3006	1525427
192	27.6	12.1	0.0	chr16	81007744	81007801	(9330544)	C	L2a	LINE/L2	(2)	3424	3359	1526294
2324	9.9	0.0	0.0	chr16	81007825	81008127	(9330218)	+	AluSx1	SINE/Alu	1	303	(9)	1526295
254	8.3	0.0	0.0	chr16	81261144	81261179	(9077166)	+	U1	snRNA	1	36	(129)	1526921
237	26.1	14.1	5.2	chr16	81261422	81261595	(9076750)	C	Charlie19a	DNA/hAT-Charlie	(181)	205	14	1526922
15	20.7	5.0	3.2	chr16	81315299	81315358	(9022987)	+	G-rich	Low_complexity	1	63	(0)	1527044
254	29.5	0.0	1.3	chr16	81746341	81746419	(8591926)	+	L1M6	LINE/L1	440	517	(5979)	1527925
16	8.2	0.0	0.0	chr16	82170264	82170289	(8168056)	+	(CGCCC)n	Simple_repeat	1	26	(0)	1528775
532	27.6	5.0	8.1	chr16	83004968	83005176	(7333169)	C	MLT1J	LTR/ERVL-MaLR	(266)	246	45	1530202
688	14.3	7.3	2.1	chr16	84266452	84266594	(6071751)	+	MLT1J	LTR/ERVL-MaLR	36	186	(326)	1532468
390	27.5	14.0	3.3	chr16	84280594	84280777	(6057568)	+	MIRb	SINE/MIR	47	253	(15)	1532503
1098	30.6	3.5	4.5	chr16	84280851	84281312	(6057033)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	154	1532504
1130	26.1	4.5	4.3	chr16	84423419	84423815	(5914530)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	51	1532807
658	28.3	11.6	0.2	chr16	85157829	85158242	(5180103)	C	LTR33A	LTR/ERVL	(21)	499	33	1534298
464	30.4	9.7	3.3	chr16	85158249	85158585	(5179760)	C	L2a	LINE/L2	(260)	3115	2745	1534297
15	10.2	9.1	2.1	chr16	85799767	85799810	(4538535)	+	(GGCCG)n	Simple_repeat	1	48	(0)	1535469
327	23.9	2.2	1.1	chr16	86085730	86085818	(4252527)	+	MIRb	SINE/MIR	86	175	(93)	1536016
502	26.4	2.7	0.7	chr16	86085820	86085964	(4252381)	+	MLT1J	LTR/ERVL-MaLR	2	149	(363)	1536017
567	17.2	13.1	8.6	chr16	86261140	86261336	(4077009)	+	MLT1L	LTR/ERVL-MaLR	352	558	(52)	1536339
428	25.8	6.8	1.3	chr16	86261460	86261612	(4076733)	+	MLT1J1	LTR/ERVL-MaLR	1	162	(282)	1536340
2134	13.6	0.0	0.7	chr16	86362137	86362438	(3975907)	C	AluJo	SINE/Alu	(12)	300	1	1536513
337	26.4	4.4	0.0	chr16	86362546	86362632	(3975713)	+	MLT1J	LTR/ERVL-MaLR	85	175	(337)	1536514
1249	17.1	5.8	6.5	chr16	86428642	86428824	(3909521)	C	L1MC3	LINE/L1	(101)	7684	7489	1536647
809	19.5	9.5	2.9	chr16	86428829	86429034	(3909311)	C	MLT1J	LTR/ERVL-MaLR	(291)	221	1	1536646
228	30.9	6.0	3.1	chr16	86429089	86429218	(3909127)	C	MIR3	SINE/MIR	(55)	153	20	1536649
225	32.2	2.9	0.0	chr16	86555365	86555456	(3782889)	C	L2a	LINE/L2	(2)	3424	3277	1536837
709	25.9	1.7	0.6	chr16	86634365	86634539	(3703806)	+	MLT1J	LTR/ERVL-MaLR	19	195	(317)	1536978
310	42.2	2.7	0.4	chr16	86952604	86952855	(3385490)	C	MIR	SINE/MIR	(2)	260	3	1537530
1308	26.4	7.8	4.0	chr16	86952889	86953318	(3385027)	+	LTR33A	LTR/ERVL	48	495	(25)	1537531
338	34.7	5.7	2.9	chr16	86953437	86953608	(3384737)	C	MIRb	SINE/MIR	(55)	213	37	1537532
424	29.7	10.3	4.6	chr16	86975377	86975420	(3362925)	C	MER103C	DNA/hAT-Charlie	(0)	297	252	1537575
1112	26.4	8.9	9.0	chr16	86975421	86975929	(3362416)	+	MLT1J	LTR/ERVL-MaLR	5	512	(0)	1537576
298	29.7	7.6	1.9	chr16	87057199	87057359	(3280986)	C	LTR83	LTR/ERVL	(59)	721	551	1537723
251	28.8	0.0	0.0	chr16	87057454	87057519	(3280826)	+	MLT1J	LTR/ERVL-MaLR	109	174	(338)	1537724
798	25.3	9.3	16.6	chr16	87163805	87163934	(3174411)	+	LTR33B	LTR/ERVL	62	171	(332)	1537918
855	12.5	0.8	3.7	chr16	87163935	87164070	(3174275)	+	FLAM_C	SINE/Alu	1	132	(11)	1537919
264	24.3	10.1	0.9	chr16	87424566	87424673	(2913672)	+	L2a	LINE/L2	3288	3406	(20)	1538393
742	26.6	2.4	1.0	chr16	87657747	87657955	(2680390)	C	MLT1J	LTR/ERVL-MaLR	(298)	214	3	1538862
191	32.4	16.0	0.0	chr16	88515749	88515853	(1822492)	+	L3	LINE/CR1	3867	3991	(108)	1540054
182	28.4	3.8	3.8	chr16	88560987	88561092	(1777253)	C	MIR3	SINE/MIR	(13)	195	90	1540120
13	8.7	4.0	0.0	chr16	88650833	88650857	(1687488)	+	(CCCGG)n	Simple_repeat	1	26	(0)	1540271
17	22.9	0.0	2.1	chr16	88651055	88651102	(1687243)	+	(CCGCC)n	Simple_repeat	1	48	(0)	1540272
15	17.5	5.5	3.5	chr16	88651103	88651109	(1687236)	+	(CCGGCC)n	Simple_repeat	1	58	(0)	1540273
712	23.5	5.7	15.3	chr16	88662009	88662434	(1675911)	+	L1MD1	LINE/L1	5991	6373	(260)	1540279
789	12.4	8.6	0.8	chr16	88662571	88662699	(1675646)	C	AluJb	SINE/Alu	(30)	282	143	1540286
186	23.4	0.0	7.8	chr16	88662872	88662922	(1675423)	+	MIR3	SINE/MIR	109	155	(53)	1540287
2385	15.8	13.0	0.1	chr16	89257256	89257874	(1080471)	C	LTR1A2	LTR/ERV1	(101)	736	1	1541010
271	28.8	4.3	0.0	chr16	89534674	89534784	(803561)	C	L1MD3	LINE/L1	(11)	7984	7869	1541441
584	16.6	1.0	0.0	chr16	89534901	89535026	(803319)	C	FLAM_C	SINE/Alu	(6)	127	9	1541442
377	23.4	7.0	2.1	chr16	89534906	89535049	(803296)	+	SVA_E	Retroposon/SVA	129	332	(1050)	1541443
2186	12.9	0.0	0.0	chr16	89643544	89643846	(694499)	+	AluSx1	SINE/Alu	1	303	(9)	1541597
409	24.8	3.2	3.9	chr16	89643847	89643943	(694402)	+	L1MC4	LINE/L1	7323	7416	(626)	1541596
296	24.6	9.5	0.0	chr16	89643974	89644087	(694258)	+	L1MC4	LINE/L1	7474	7599	(283)	1541596
12	8.0	0.0	9.4	chr16	89686931	89686962	(651383)	+	G-rich	Low_complexity	1	32	(0)	1541680
15	22.5	0.0	2.3	chr16	89720846	89720888	(617457)	+	(CGG)n	Simple_repeat	1	43	(0)	1541725
12	30.4	1.2	5.8	chr16	89721182	89721266	(617079)	+	(CCCCCGC)n	Simple_repeat	1	86	(0)	1541726
719	11.3	0.9	0.8	chr16	89817057	89817172	(521173)	+	FLAM_C	SINE/Alu	6	117	(16)	1541909
580	16.7	0.0	0.0	chr16	89926575	89926670	(411675)	C	AluSx3	SINE/Alu	(13)	298	203	1542090
2321	10.5	0.3	0.0	chr16	89926711	89927016	(411329)	C	AluSq	SINE/Alu	(6)	307	1	1542091
13	23.5	1.8	5.4	chr16	89972927	89972981	(365364)	+	(CCT)n	Simple_repeat	1	56	(0)	1542179
12	8.0	0.0	9.4	chr17	752273	752304	(82505137)	+	(CCGCC)n	Simple_repeat	1	32	(0)	1545737
16	8.5	4.7	6.7	chr17	1456146	1456192	(81801249)	+	(GCC)n	Simple_repeat	1	46	(0)	1547172
2353	7.4	0.0	1.6	chr17	1517247	1517557	(81739884)	+	AluSz	SINE/Alu	1	306	(6)	1547280
39	15.8	1.8	6.2	chr17	1649096	1649206	(81608235)	+	(GCCCC)n	Simple_repeat	1	113	(0)	1547528
14	13.4	7.0	2.2	chr17	1724837	1724879	(81532562)	+	(GCCCCA)n	Simple_repeat	1	46	(0)	1547675
17	26.5	0.0	3.2	chr17	1829801	1829862	(81427579)	+	(CCCGC)n	Simple_repeat	1	62	(0)	1547918
644	33.3	14.0	3.8	chr17	1830274	1830765	(81426676)	+	L2a	LINE/L2	1721	2290	(1129)	1547919
574	15.7	2.7	8.5	chr17	1946117	1946234	(81311207)	C	MER81	DNA/hAT-Blackjack	(1)	113	3	1548134
203	33.4	2.2	0.2	chr17	1946403	1947212	(81310229)	+	(TG)n	Simple_repeat	1	828	(0)	1548135
274	22.0	1.7	0.0	chr17	2030595	2030653	(81226788)	C	L2b	LINE/L2	(5)	3370	3311	1548324
14	12.8	6.5	4.1	chr17	2058469	2058514	(81198927)	+	(GCGCG)n	Simple_repeat	1	49	(0)	1548367
12	22.5	3.9	7.4	chr17	2303520	2303559	(80953882)	+	G-rich	Low_complexity	1	68	(13)	1548855
15	17.7	0.0	0.0	chr17	2303560	2303591	(80953850)	+	GA-rich	Low_complexity	1	32	(0)	1548856
2498	11.4	1.4	0.0	chr17	2624381	2624730	(80632711)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1549604
1611	17.2	1.4	4.5	chr17	2624731	2624842	(80632599)	C	AluJb	SINE/Alu	(203)	109	1	1549603
2302	6.6	0.0	0.0	chr17	2842281	2842552	(80414889)	+	AluSx	SINE/Alu	34	305	(7)	1550084
2251	11.0	0.3	2.3	chr17	3194700	3195009	(80062432)	+	AluSg4	SINE/Alu	1	304	(6)	1550686
257	32.7	11.1	0.6	chr17	3195021	3195189	(80062252)	C	MLT1J2	LTR/ERVL-MaLR	(58)	390	202	1550687
443	21.8	0.9	2.6	chr17	3195231	3195343	(80062098)	C	MLT1J2	LTR/ERVL-MaLR	(337)	111	1	1550687
331	29.3	10.5	2.1	chr17	3213566	3213757	(80043684)	C	MLT1J1	LTR/ERVL-MaLR	(50)	398	189	1550721
532	18.1	0.0	3.7	chr17	3213783	3213891	(80043550)	C	MLT1J1	LTR/ERVL-MaLR	(322)	122	18	1550721
1913	9.8	1.8	0.0	chr17	4730911	4731186	(78526255)	+	AluSx1	SINE/Alu	15	295	(17)	1553636
2166	6.8	0.7	1.1	chr17	4795661	4795938	(78461503)	C	AluSg	SINE/Alu	(0)	310	34	1553804
12	16.1	0.0	3.3	chr17	4939771	4939800	(78317641)	+	(CCCTT)n	Simple_repeat	1	30	(0)	1554104
15	27.8	2.9	4.2	chr17	4939941	4940010	(78317431)	+	(CG)n	Simple_repeat	1	72	(0)	1554105
244	24.2	4.6	3.1	chr17	5419929	5419992	(77837449)	+	L2	LINE/L2	2380	2444	(975)	1555105
11	18.8	8.0	1.9	chr17	5438851	5438900	(77818541)	+	(GCAGGC)n	Simple_repeat	1	54	(0)	1555141
2520	6.0	0.3	1.0	chr17	5469177	5469490	(77787951)	C	AluSp	SINE/Alu	(1)	312	1	1555203
1980	15.4	2.6	10.8	chr17	5695594	5696009	(77561432)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1555631
568	27.3	6.5	4.4	chr17	6238562	6238750	(77018691)	C	MIRc	SINE/MIR	(35)	233	41	1556660
2313	9.8	0.0	0.0	chr17	6238751	6239045	(77018396)	C	AluSx	SINE/Alu	(17)	295	1	1556661
676	26.6	16.0	4.5	chr17	6328206	6328602	(76928839)	C	MLT1J	LTR/ERVL-MaLR	(51)	461	11	1556864
184	32.1	6.7	0.0	chr17	6328831	6328914	(76928527)	C	L2	LINE/L2	(695)	2724	2635	1556865
226	34.1	7.4	5.4	chr17	6510324	6510639	(76746802)	+	L2b	LINE/L2	3053	3375	(0)	1557223
283	26.2	1.2	0.0	chr17	6714247	6714326	(76543115)	C	L2b	LINE/L2	(11)	3364	3284	1557588
1890	5.4	0.0	0.0	chr17	7012919	7013141	(76244300)	+	AluSx	SINE/Alu	77	299	(13)	1558085
13	16.3	2.1	6.1	chr17	7239468	7239500	(76017941)	+	(GCC)n	Simple_repeat	1	30	(0)	1558483
28	4.2	0.0	8.6	chr17	7239501	7239558	(76017883)	+	(CCT)n	Simple_repeat	1	58	(0)	1558484
13	16.3	2.1	6.1	chr17	7239559	7239572	(76017869)	+	(GCC)n	Simple_repeat	1	15	(0)	1558485
12	23.3	0.0	0.0	chr17	7314947	7314981	(75942460)	+	(GCTCCC)n	Simple_repeat	1	35	(0)	1558614
2205	9.7	0.0	0.0	chr17	7434826	7435103	(75822338)	C	AluSq2	SINE/Alu	(35)	278	1	1558824
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
502	29.9	12.0	4.0	chr17	7687850	7688124	(75569317)	+	L2a	LINE/L2	3125	3424	(2)	1559336
15	12.8	2.8	2.7	chr17	7916266	7916301	(75341140)	+	G-rich	Low_complexity	1	37	(0)	1559740
22	17.0	2.7	6.5	chr17	8090916	8090990	(75166451)	+	G-rich	Low_complexity	1	77	(0)	1560072
299	23.7	9.7	0.0	chr17	8162499	8162591	(75094850)	+	MIR3	SINE/MIR	45	147	(61)	1560200
31	19.2	1.2	3.6	chr17	8163007	8163089	(75094352)	+	G-rich	Low_complexity	1	84	(0)	1560201
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
741	1.2	0.0	0.0	chr17	8186866	8186947	(75070494)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	1560264
15	31.6	0.0	3.0	chr17	8189693	8189758	(75067683)	+	(CCT)n	Simple_repeat	1	66	(0)	1560268
19	23.1	5.2	3.7	chr17	8210229	8210305	(75047136)	+	GA-rich	Low_complexity	1	81	(0)	1560323
434	29.1	11.2	2.5	chr17	8376267	8376428	(74881013)	+	MIR	SINE/MIR	46	223	(39)	1560688
661	22.7	7.5	1.1	chr17	8846757	8846943	(74410498)	+	MLT1J1	LTR/ERVL-MaLR	15	214	(230)	1561581
1167	28.8	6.7	2.4	chr17	9199442	9199791	(74057650)	C	MLT1J2	LTR/ERVL-MaLR	(73)	375	14	1562238
207	26.1	19.0	0.9	chr17	9199955	9200070	(74057371)	C	MamSINE1	SINE/tRNA-RTE	(143)	147	6	1562240
398	26.1	12.0	2.1	chr17	9537213	9537400	(73720041)	+	MLT1J2	LTR/ERVL-MaLR	4	212	(236)	1562899
404	27.1	3.3	0.8	chr17	10791172	10791290	(72466151)	C	LTR88b	LTR/Gypsy?	(652)	185	64	1565294
2934	11.4	3.7	0.2	chr17	12377042	12377251	(70880190)	C	MER61B	LTR/ERV1	(0)	427	218	1567955
12	9.7	0.0	0.0	chr17	12789487	12789508	(70467933)	+	(GCCA)n	Simple_repeat	1	22	(0)	1568663
17	19.8	1.7	6.6	chr17	12789616	12789675	(70467766)	+	(GCG)n	Simple_repeat	1	61	(0)	1568664
2373	8.5	1.4	0.0	chr17	13798373	13798665	(69458776)	+	AluSx1	SINE/Alu	1	297	(15)	1570371
554	27.2	7.2	7.0	chr17	13798779	13798920	(69458521)	+	MLT1J2	LTR/ERVL-MaLR	56	195	(253)	1570372
1117	23.5	4.2	4.2	chr17	13798921	13799053	(69458388)	C	MER58B	DNA/hAT-Charlie	(0)	341	214	1570373
1170	28.0	9.2	3.4	chr17	15498033	15498439	(67759002)	C	MLT1J2	LTR/ERVL-MaLR	(15)	433	1	1573158
334	15.7	0.0	0.0	chr17	15684352	15684402	(67573039)	+	AluYb8	SINE/Alu	258	308	(10)	1573497
345	31.6	14.9	0.6	chr17	16438620	16438801	(66818640)	C	MIRc	SINE/MIR	(7)	261	56	1574991
1294	21.4	10.7	3.4	chr17	17415940	17416404	(65841037)	C	MLT1J	LTR/ERVL-MaLR	(8)	504	2	1576637
11	21.8	0.0	4.9	chr17	17591984	17592024	(65665417)	+	G-rich	Low_complexity	1	41	(0)	1576914
968	27.7	7.2	1.3	chr17	17609267	17609646	(65647795)	+	MLT1J2	LTR/ERVL-MaLR	44	447	(1)	1576959
558	23.5	4.3	0.0	chr17	17750083	17750214	(65507227)	C	MLT1J2	LTR/ERVL-MaLR	(287)	161	24	1577279
406	29.8	3.2	3.2	chr17	17750257	17750412	(65507029)	C	MIRb	SINE/MIR	(3)	265	110	1577280
188	27.6	2.6	6.2	chr17	17850271	17850351	(65407090)	C	MamRTE1	LINE/RTE-BovB	(3165)	647	570	1577459
41	9.7	1.5	0.0	chr17	18039406	18039471	(65217970)	+	(GT)n	Simple_repeat	1	67	(0)	1577827
292	31.0	2.1	8.4	chr17	18258056	18258210	(64999231)	C	MIR1_Amn	SINE/MIR	(25)	205	61	1578234
13	11.6	3.6	0.0	chr17	18323866	18323893	(64933548)	+	(AGAGC)n	Simple_repeat	1	29	(0)	1578356
319	15.7	0.0	0.0	chr17	18697907	18697957	(64559484)	C	AluYb8	SINE/Alu	(10)	308	258	1578956
640	2.8	0.0	0.0	chr17	19508181	19508252	(63749189)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	1580743
13	12.1	0.0	3.5	chr17	20009436	20009464	(63247977)	+	(CCGC)n	Simple_repeat	1	29	(0)	1581768
482	16.7	14.7	1.8	chr17	21098909	21099073	(62158368)	+	L1ME3	LINE/L1	5853	6042	(120)	1583654
454	24.6	13.3	1.3	chr17	21218254	21218428	(62039013)	C	LTR33B	LTR/ERVL	(286)	234	42	1583862
182	16.1	0.0	0.0	chr17	21218467	21218497	(62038944)	+	MIRb	SINE/MIR	162	192	(76)	1583863
349	21.8	1.3	0.0	chr17	21323125	21323202	(61934239)	C	MLT1J	LTR/ERVL-MaLR	(336)	176	98	1584075
21	3.3	3.2	0.0	chr17	27276590	27276620	(55980821)	+	(TAAA)n	Simple_repeat	1	32	(0)	1586432
1952	20.8	16.0	4.2	chr17	27276652	27277228	(55980213)	+	MLT2F	LTR/ERVL	3	660	(3)	1586433
18	6.8	3.2	0.0	chr17	27456279	27456309	(55801132)	+	(GGGAG)n	Simple_repeat	1	32	(0)	1586829
502	30.3	8.8	0.4	chr17	27931945	27932183	(55325258)	C	L2	LINE/L2	(925)	2494	2234	1587714
903	24.6	14.1	7.4	chr17	27932185	27932504	(55324937)	+	MLT1J	LTR/ERVL-MaLR	2	354	(158)	1587715
2249	14.8	5.6	1.5	chr17	27932505	27932916	(55324525)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	3	1587716
1265	27.0	7.0	3.0	chr17	28008849	28009341	(55248100)	C	Tigger11a	DNA/TcMar-Tigger	(164)	571	58	1587893
1397	12.6	4.5	0.0	chr17	28216352	28216582	(55040859)	+	L1MA9	LINE/L1	6070	6311	(1)	1588284
1000	21.2	5.3	4.2	chr17	28216608	28216868	(55040573)	C	MLT1J	LTR/ERVL-MaLR	(247)	265	2	1588285
2851	1.3	0.0	0.0	chr17	28250898	28251206	(55006235)	C	AluYb8	SINE/Alu	(9)	309	1	1588332
1013	15.8	4.1	0.0	chr17	28318592	28318755	(54938686)	C	AluJo	SINE/Alu	(140)	172	2	1588460
1067	5.5	0.0	0.0	chr17	28719633	28719760	(54537681)	+	AluYh3	SINE/Alu	142	269	(42)	1589196
30	0.0	3.1	0.0	chr17	28719764	28719795	(54537646)	+	(AAAACAA)n	Simple_repeat	1	33	(0)	1589197
14	26.4	4.2	2.7	chr17	28842798	28842868	(54414573)	+	(GCCTGC)n	Simple_repeat	1	74	(0)	1589458
12	26.6	4.1	4.0	chr17	29005984	29006056	(54251385)	+	(CAGCGC)n	Simple_repeat	1	76	(0)	1589755
275	33.6	0.0	0.9	chr17	29042850	29042963	(54214478)	+	Eulor8	DNA/TcMar?	381	493	(69)	1589828
240	26.8	11.3	7.5	chr17	29624852	29625012	(53632429)	+	MIRc	SINE/MIR	8	175	(93)	1591021
12	16.9	2.9	2.8	chr17	30235684	30235718	(53021723)	+	(GCGGC)n	Simple_repeat	1	36	(0)	1592201
2450	6.5	0.3	0.7	chr17	30730919	30731226	(52526215)	+	AluSx3	SINE/Alu	1	307	(4)	1593146
282	31.4	5.0	4.5	chr17	31802632	31802808	(51454633)	C	MLT1N2	LTR/ERVL-MaLR	(284)	278	101	1595334
282	13.0	23.3	0.0	chr17	31802877	31802945	(51454496)	+	L1MB3	LINE/L1	6051	6140	(43)	1595335
907	10.2	0.8	1.6	chr17	31802948	31803074	(51454367)	+	AluJb	SINE/Alu	1	126	(186)	1595336
2384	7.1	0.0	0.3	chr17	31936291	31936586	(51320855)	+	AluSx3	SINE/Alu	1	295	(16)	1595691
16	23.0	0.0	7.7	chr17	32444481	32444545	(50812896)	+	(CGG)n	Simple_repeat	1	65	(0)	1596845
440	37.9	9.1	5.2	chr17	34797942	34798362	(48459079)	+	L2b	LINE/L2	2918	3356	(19)	1601091
1042	8.0	0.0	2.9	chr17	36777073	36777209	(46480232)	C	AluSz	SINE/Alu	(179)	133	1	1604618
193	19.7	0.0	0.0	chr17	36777212	36777256	(46480185)	C	MIRc	SINE/MIR	(56)	152	108	1604619
19	22.2	1.9	0.0	chr17	36948809	36948860	(46308581)	+	(CGCGCA)n	Simple_repeat	1	53	(0)	1604977
230	25.9	0.0	0.0	chr17	38752278	38752331	(44505110)	C	L2a	LINE/L2	(6)	3420	3367	1608490
218	24.2	11.4	0.0	chr17	38752339	38752400	(44505041)	+	L2a	LINE/L2	3357	3426	(0)	1608490
280	15.2	0.0	3.3	chr17	38873013	38873073	(44384368)	C	L2a	LINE/L2	(0)	3426	3368	1608782
16	14.2	0.0	0.0	chr17	39603889	39603919	(43653522)	+	(TGTG)n	Simple_repeat	1	31	(0)	1610441
343	24.8	10.8	4.1	chr17	39927856	39928002	(43329439)	C	MIRc	SINE/MIR	(109)	159	2	1611011
12	23.3	4.4	0.0	chr17	39980700	39980744	(43276697)	+	(TCCTCCA)n	Simple_repeat	1	47	(0)	1611118
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
16	10.7	7.1	2.2	chr17	39981111	39981152	(43276289)	+	(GACGGCA)n	Simple_repeat	1	45	(0)	1611121
106	1.8	3.5	0.0	chr17	40140318	40140430	(43117011)	+	(AC)n	Simple_repeat	1	117	(0)	1611417
18	19.4	0.0	0.0	chr17	40140646	40140686	(43116755)	+	(GCGGCA)n	Simple_repeat	1	41	(0)	1611418
17	11.2	0.0	8.7	chr17	40140786	40140838	(43116603)	+	(GGCGG)n	Simple_repeat	1	48	(0)	1611419
68	0.0	0.0	0.0	chr17	40194233	40194290	(43063151)	+	(GT)n	Simple_repeat	1	58	(0)	1611535
15	13.4	7.3	0.0	chr17	40363411	40363451	(42893990)	+	(GCGGCGC)n	Simple_repeat	1	44	(0)	1611884
25	15.5	0.0	0.0	chr17	40371361	40371403	(42886038)	+	(CT)n	Simple_repeat	1	43	(0)	1611905
451	21.4	1.6	4.5	chr17	40371411	40371542	(42885899)	C	MLT1J1	LTR/ERVL-MaLR	(282)	162	35	1611901
12	7.5	6.7	3.1	chr17	41786139	41786168	(41471273)	+	G-rich	Low_complexity	1	32	(0)	1614291
28	19.9	2.6	2.5	chr17	41865324	41865401	(41392040)	+	(GCC)n	Simple_repeat	1	80	(0)	1614463
22	14.9	0.0	0.0	chr17	41865834	41865870	(41391571)	+	(T)n	Simple_repeat	1	37	(0)	1614464
12	20.3	0.0	9.3	chr17	41919182	41919235	(41338206)	+	G-rich	Low_complexity	1	54	(0)	1614562
43	22.4	1.3	5.8	chr17	42121140	42121291	(41136150)	+	(GGCTGG)n	Simple_repeat	1	154	(0)	1614977
2354	5.5	2.0	0.7	chr17	42155250	42155542	(41101899)	C	AluSx	SINE/Alu	(15)	297	1	1615041
19	15.2	2.5	9.8	chr17	42184176	42184255	(41073186)	+	(GGCGC)n	Simple_repeat	1	82	(0)	1615097
19	7.4	0.0	0.0	chr17	42184480	42184508	(41072933)	+	(GCA)n	Simple_repeat	1	29	(0)	1615098
257	33.0	9.2	1.6	chr17	42184602	42184826	(41072615)	+	L2c	LINE/L2	2989	3238	(149)	1615099
13	15.5	9.3	0.0	chr17	42745050	42745095	(40512346)	+	(GCGCCCC)n	Simple_repeat	1	50	(0)	1616277
1777	19.2	4.5	12.9	chr17	42745472	42745660	(40511781)	+	L1MC4a	LINE/L1	7234	7404	(638)	1616278
19	28.9	5.4	0.0	chr17	42833431	42833522	(40423919)	+	(GCGA)n	Simple_repeat	1	97	(0)	1616449
17	15.5	0.0	0.0	chr17	42964656	42964684	(40292757)	+	A-rich	Low_complexity	1	29	(0)	1616764
20	22.3	3.5	0.0	chr17	43022172	43022228	(40235213)	+	(GGC)n	Simple_repeat	1	59	(0)	1616898
2175	10.4	0.3	0.0	chr17	43368407	43368693	(39888748)	C	AluSx3	SINE/Alu	(23)	288	1	1617636
1105	29.5	9.2	4.5	chr17	43611643	43612129	(39645312)	+	MLT1J	LTR/ERVL-MaLR	1	512	(0)	1618235
12	11.1	0.0	8.6	chr17	43720762	43720796	(39536645)	+	(GCCTCC)n	Simple_repeat	1	35	(0)	1618471
1879	7.3	0.4	0.0	chr17	43721047	43721314	(39536127)	C	AluSx3	SINE/Alu	(0)	311	47	1618472
383	19.4	6.4	4.6	chr17	43755957	43756064	(39501377)	+	MIR	SINE/MIR	35	144	(118)	1618548
23	16.1	4.5	2.9	chr17	43938408	43938473	(39318968)	+	GA-rich	Low_complexity	1	69	(0)	1618888
25	15.9	0.0	0.0	chr17	44070448	44070489	(39186952)	+	(T)n	Simple_repeat	1	42	(0)	1619180
265	28.6	3.2	0.0	chr17	44142270	44142360	(39115081)	+	MIR3	SINE/MIR	36	129	(79)	1619320
269	34.5	1.4	8.0	chr17	44187464	44187687	(39069754)	+	MIR	SINE/MIR	21	229	(33)	1619419
39	24.9	1.0	0.0	chr17	44219550	44219649	(39037792)	+	(GCG)n	Simple_repeat	1	101	(0)	1619463
199	36.2	3.5	2.8	chr17	44384624	44384765	(38872676)	C	MIR3	SINE/MIR	(0)	208	66	1619820
19	19.1	1.3	7.8	chr17	44384767	44384842	(38872599)	+	(GCGGTGG)n	Simple_repeat	1	77	(0)	1619821
310	27.7	9.8	2.3	chr17	44689917	44690110	(38567331)	C	MIRb	SINE/MIR	(47)	221	3	1620501
421	27.7	9.0	1.4	chr17	45051053	45051195	(38206246)	C	MIR	SINE/MIR	(80)	182	28	1621258
427	29.1	14.3	1.9	chr17	45051197	45051403	(38206038)	+	MIRb	SINE/MIR	25	261	(7)	1621259
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
693	15.1	6.7	0.8	chr17	45759712	45759837	(37497604)	C	FLAM_C	SINE/Alu	(8)	135	2	1622730
654	21.6	1.4	0.7	chr17	45759845	45759984	(37497457)	+	MLT1J	LTR/ERVL-MaLR	71	211	(301)	1622731
2030	6.7	8.9	0.0	chr17	47492834	47493100	(35764341)	+	AluSx	SINE/Alu	1	293	(19)	1626105
394	27.1	1.6	0.0	chr17	47649133	47649257	(35608184)	+	MIR3	SINE/MIR	61	182	(26)	1626487
2309	10.0	0.7	0.0	chr17	48101669	48101969	(35155472)	+	AluSx1	SINE/Alu	1	303	(9)	1627296
15	7.2	6.9	0.0	chr17	48998498	48998526	(34258915)	+	(GCG)n	Simple_repeat	1	31	(0)	1629010
466	24.6	2.5	0.8	chr17	49496989	49497107	(33760334)	C	MIR3	SINE/MIR	(68)	140	20	1630055
18	24.8	0.0	1.9	chr17	49678139	49678192	(33579249)	+	(CCCCT)n	Simple_repeat	1	54	(0)	1630373
228	23.3	2.2	10.9	chr17	50397055	50397155	(32860286)	C	MIR3	SINE/MIR	(24)	184	93	1631695
370	29.0	8.3	6.0	chr17	50517870	50518104	(32739337)	C	MLT1O	LTR/ERVL-MaLR	(47)	495	255	1631962
14	17.1	1.6	9.4	chr17	50866466	50866528	(32390913)	+	(CCCCGG)n	Simple_repeat	1	64	(0)	1632611
1338	25.1	7.4	3.5	chr17	51372515	51372940	(31884501)	C	MLT1J1	LTR/ERVL-MaLR	(0)	444	1	1633649
364	29.8	3.4	1.3	chr17	51372965	51373131	(31884310)	+	L1ME3Cz	LINE/L1	5645	5797	(327)	1633650
607	32.5	6.8	2.5	chr17	51873023	51873262	(31384179)	+	MIRb	SINE/MIR	9	259	(9)	1634574
368	32.6	0.0	3.0	chr17	51873269	51873401	(31384040)	+	MIRb	SINE/MIR	48	176	(92)	1634575
928	26.1	23.7	0.8	chr17	51873413	51873900	(31383541)	+	LTR67B	LTR/ERVL	13	618	(2)	1634576
804	27.8	5.0	6.4	chr17	55237767	55238173	(28019268)	C	L1ME4b	LINE/L1	(149)	743	343	1639293
595	20.4	11.4	6.4	chr17	57775041	57775213	(25482228)	+	MLT1J1	LTR/ERVL-MaLR	21	206	(205)	1643820
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
39	9.5	0.0	0.0	chr17	58756097	58756154	(24501287)	+	(GAACCC)n	Simple_repeat	1	58	(0)	1645698
208	18.8	4.1	0.0	chr17	59565188	59565236	(23692205)	+	MIRc	SINE/MIR	61	108	(100)	1647535
335	32.5	5.6	6.6	chr17	59619923	59620103	(23637338)	+	L1MDb	LINE/L1	582	760	(5649)	1647644
15	28.3	0.0	1.9	chr17	60600533	60600585	(22656856)	+	(CGC)n	Simple_repeat	1	53	(0)	1649630
23	18.6	1.7	1.7	chr17	63477101	63477184	(19780257)	+	(GCTGCC)n	Simple_repeat	1	84	(0)	1654788
11	13.3	5.7	2.7	chr17	63477350	63477384	(19780057)	+	(GCCCGG)n	Simple_repeat	1	37	(0)	1654789
14	13.7	3.1	0.0	chr17	63477434	63477465	(19779976)	+	(CCCGAA)n	Simple_repeat	1	33	(0)	1654790
15	10.0	6.1	0.0	chr17	63477649	63477681	(19779760)	+	(CTGTCA)n	Simple_repeat	1	35	(0)	1654791
33	0.0	0.0	2.8	chr17	63522999	63523034	(19734407)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1654861
23	28.3	3.8	1.8	chr17	63523162	63523267	(19734174)	+	GA-rich	Low_complexity	1	110	(0)	1654862
20	10.0	0.0	0.0	chr17	64129987	64130018	(19127423)	+	(GCA)n	Simple_repeat	1	32	(0)	1655959
12	18.8	2.6	2.6	chr17	64146158	64146195	(19111246)	+	G-rich	Low_complexity	1	39	(0)	1656000
379	23.0	15.4	2.0	chr17	65229919	65230069	(18027372)	+	MER5B	DNA/hAT-Charlie	4	178	(0)	1658249
666	30.1	2.5	2.0	chr17	65230135	65230378	(18027063)	C	MLT1J	LTR/ERVL-MaLR	(267)	245	1	1658250
36	2.7	0.0	0.0	chr17	65230418	65230455	(18026986)	+	(TAACA)n	Simple_repeat	1	38	(0)	1658251
900	29.8	7.8	1.7	chr17	65322924	65323281	(17934160)	C	MLT1J2	LTR/ERVL-MaLR	(2)	446	65	1658436
985	32.9	10.0	6.0	chr17	65323390	65323899	(17933542)	+	L3	LINE/CR1	2314	2854	(1245)	1658435
892	28.7	11.6	2.8	chr17	66930864	66931332	(16326109)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	47	1661079
19	26.2	5.7	2.7	chr17	68101797	68101853	(15155588)	+	(GCCGCC)n	Simple_repeat	1	108	(0)	1663535
13	16.2	4.4	4.3	chr17	68101854	68101898	(15155543)	+	(CCGCC)n	Simple_repeat	1	47	(0)	1663536
940	26.0	8.0	2.2	chr17	68199736	68200053	(15057388)	+	MER46C	DNA/TcMar-Tigger	1	338	(0)	1663730
17	30.2	1.1	4.4	chr17	68247975	68248063	(15009378)	+	(GGCGC)n	Simple_repeat	1	90	(0)	1663830
622	26.9	3.9	3.3	chr17	72409512	72409692	(10847749)	+	MIRb	SINE/MIR	77	258	(10)	1670340
1183	28.5	2.8	4.8	chr17	72409707	72410181	(10847260)	+	MLT1J	LTR/ERVL-MaLR	5	469	(43)	1670341
16	12.8	2.9	0.0	chr17	72592852	72592885	(10664556)	+	G-rich	Low_complexity	1	35	(0)	1670654
1526	20.5	0.0	11.1	chr17	72593169	72593608	(10663833)	C	MLT1C	LTR/ERVL-MaLR	(76)	391	1	1670655
2984	6.7	0.8	0.5	chr17	73176309	73176682	(10080759)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1671792
1590	20.6	11.0	5.1	chr17	74189898	74190291	(9067150)	+	MSTC	LTR/ERVL-MaLR	1	420	(8)	1673659
459	23.0	1.0	0.0	chr17	74190307	74190406	(9067035)	C	MLT1J	LTR/ERVL-MaLR	(331)	181	81	1673658
308	27.9	8.5	5.0	chr17	74212919	74213159	(9044282)	+	L2c	LINE/L2	3119	3387	(0)	1673699
27	16.1	3.6	3.6	chr17	74213463	74213538	(9043903)	+	G-rich	Low_complexity	1	76	(0)	1673700
358	26.9	13.0	7.8	chr17	74358763	74359044	(8898397)	+	MLT1J	LTR/ERVL-MaLR	1	299	(213)	1674000
1113	28.6	6.5	5.4	chr17	74392943	74393385	(8864056)	+	MLT1J2	LTR/ERVL-MaLR	1	448	(0)	1674067
11	21.2	2.5	2.4	chr17	74852554	74852593	(8404848)	+	(GCAGCT)n	Simple_repeat	1	41	(0)	1674876
12	8.1	3.6	3.5	chr17	74852615	74852642	(8404799)	+	G-rich	Low_complexity	1	29	(0)	1674877
628	25.4	1.8	0.0	chr17	74852824	74852992	(8404449)	+	MER5A	DNA/hAT-Charlie	18	189	(0)	1674878
630	0.0	0.0	0.0	chr17	75034432	75034503	(8222938)	C	tRNA-Arg-AGG	tRNA	(4)	72	1	1675213
194	30.8	11.7	1.1	chr17	75262043	75262134	(7995307)	+	MIRc	SINE/MIR	3	105	(163)	1675711
33	10.4	0.0	0.0	chr17	76072415	76072467	(7184974)	+	(CCG)n	Simple_repeat	1	53	(0)	1677337
202	29.8	4.0	4.8	chr17	76557890	76558010	(6699431)	+	MIR	SINE/MIR	96	216	(52)	1678274
15	16.9	2.3	4.4	chr17	77462599	77462642	(5794799)	+	(TTTG)n	Simple_repeat	1	45	(0)	1680082
1989	14.0	3.3	0.0	chr17	77462650	77462941	(5794500)	C	AluSz	SINE/Alu	(10)	302	1	1680083
548	29.1	4.1	4.8	chr17	77462954	77463275	(5794166)	C	MER34	LTR/ERV1	(174)	533	6	1680084
17	10.8	0.0	0.0	chr17	77529116	77529145	(5728296)	+	(GCTGG)n	Simple_repeat	1	30	(0)	1680187
600	27.2	14.1	7.2	chr17	77948711	77949071	(5308370)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	59	1680943
197	29.4	7.6	0.0	chr17	77949415	77949499	(5307942)	C	MIR3	SINE/MIR	(13)	195	104	1680944
2246	11.1	0.0	0.0	chr17	78213748	78214044	(5043397)	C	AluSq2	SINE/Alu	(16)	297	1	1681420
53	0.0	0.0	0.0	chr17	78254749	78254793	(5002648)	+	(GT)n	Simple_repeat	1	45	(0)	1681498
19	42.6	1.1	3.7	chr17	78317345	78317457	(4939984)	+	(GTGCGT)n	Simple_repeat	1	189	(0)	1681639
21	35.3	0.0	1.4	chr17	78317458	78317531	(4939910)	+	(TG)n	Simple_repeat	1	74	(0)	1681640
1307	16.4	0.0	0.5	chr17	78461974	78462174	(4795267)	+	AluJr	SINE/Alu	86	285	(27)	1681881
412	29.9	1.2	3.6	chr17	78583269	78583385	(4674056)	C	MLT1J	LTR/ERVL-MaLR	(313)	199	63	1682066
2388	16.4	1.4	7.1	chr17	78583386	78583586	(4673855)	+	MSTB	LTR/ERVL-MaLR	1	199	(227)	1682067
23	11.2	0.0	0.0	chr17	79009696	79009734	(4247707)	+	(GGCTG)n	Simple_repeat	1	39	(0)	1682841
25	21.1	0.0	0.0	chr17	79009865	79009914	(4247527)	+	(T)n	Simple_repeat	1	50	(0)	1682842
1906	13.6	4.4	0.3	chr17	79294313	79294598	(3962843)	C	AluSx1	SINE/Alu	(13)	299	2	1683246
644	24.8	10.8	3.1	chr17	79728637	79728876	(3528565)	C	MLT1J	LTR/ERVL-MaLR	(220)	224	1	1683833
1809	15.0	1.0	8.1	chr17	80177706	80177843	(3079598)	C	AluJb	SINE/Alu	(187)	125	1	1684611
1064	24.7	10.3	4.6	chr17	80177844	80177998	(3079443)	C	MLT1C	LTR/ERVL-MaLR	(285)	182	14	1684610
17	15.9	0.0	0.0	chr17	80220323	80220357	(3037084)	+	(GGCTCG)n	Simple_repeat	1	35	(0)	1684680
16	21.4	0.0	8.6	chr17	80220366	80220435	(3037006)	+	(CCCGC)n	Simple_repeat	1	70	(0)	1684681
14	9.0	5.1	4.9	chr17	80220512	80220550	(3036891)	+	G-rich	Low_complexity	1	41	(0)	1684682
366	27.6	1.3	7.7	chr17	80441702	80441870	(2815571)	C	MLT1K	LTR/ERVL-MaLR	(245)	350	193	1685020
13	10.7	6.7	0.0	chr17	81239695	81239724	(2017717)	+	(CCCTT)n	Simple_repeat	1	32	(0)	1686024
16	0.0	0.0	0.0	chr17	81495058	81495077	(1762364)	+	(CTG)n	Simple_repeat	1	20	(0)	1686309
413	32.1	0.6	5.6	chr17	81495114	81495291	(1762150)	C	MLT1N2	LTR/ERVL-MaLR	(287)	275	107	1686310
376	26.6	4.8	1.4	chr17	81495352	81495492	(1761949)	+	L1M5	LINE/L1	5512	5657	(467)	1686311
2335	7.7	1.0	2.6	chr17	81653803	81654115	(1603326)	C	AluSq	SINE/Alu	(5)	308	1	1686581
231	20.4	1.8	0.0	chr17	81711071	81711124	(1546317)	C	MER47C	DNA/TcMar-Tigger	(14)	83	29	1686673
13	11.9	0.0	10.9	chr17	82023341	82023386	(1234055)	+	G-rich	Low_complexity	1	46	(0)	1687054
2334	10.4	0.3	0.0	chr17	82350114	82350421	(907020)	C	AluSx	SINE/Alu	(3)	309	1	1687520
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
291	24.1	9.2	0.0	chr17	82442030	82442108	(815333)	C	MIR	SINE/MIR	(69)	193	107	1687649
16	23.6	0.0	0.0	chr17	82450409	82450443	(806998)	+	(CA)n	Simple_repeat	1	35	(0)	1687654
664	0.0	0.0	0.0	chr17	82494721	82494792	(762649)	C	tRNA-Met-i	tRNA	(3)	72	1	1687730
2441	6.4	1.3	0.0	chr17	82494999	82495294	(762147)	+	AluSp	SINE/Alu	1	300	(13)	1687731
19	21.2	0.0	2.0	chr17	83051904	83051954	(205487)	+	(GGCGG)n	Simple_repeat	1	51	(0)	1688528
986	8.1	0.0	0.0	chr18	158118	158240	(80215045)	C	AluJb	SINE/Alu	(12)	300	178	1689318
22	24.0	2.6	2.5	chr18	158379	158406	(80214879)	+	(CCCT)n	Simple_repeat	1	77	(0)	1689319
13	19.1	0.0	6.4	chr18	158407	158453	(80214832)	+	(CCCTCCA)n	Simple_repeat	1	47	(0)	1689320
26	27.5	3.3	3.2	chr18	158579	158698	(80214587)	+	(GCC)n	Simple_repeat	1	124	(0)	1689321
12	22.1	0.0	0.0	chr18	712651	712682	(79660603)	+	GA-rich	Low_complexity	1	32	(0)	1690298
13	28.8	0.0	2.1	chr18	3452651	3452698	(76920587)	+	(TCC)n	Simple_repeat	1	48	(0)	1694441
17	12.2	4.0	5.8	chr18	5197130	5197179	(75176106)	+	(GGCG)n	Simple_repeat	1	52	(0)	1696918
571	23.1	6.2	3.9	chr18	7363448	7363650	(73009635)	+	MLT1J2	LTR/ERVL-MaLR	2	209	(239)	1699976
553	24.4	4.7	4.1	chr18	8538855	8539025	(71834260)	+	MER63A	DNA/hAT-Blackjack	1	172	(38)	1701528
308	14.0	0.0	0.0	chr18	8539098	8539147	(71834138)	+	MLT1L	LTR/ERVL-MaLR	91	140	(372)	1701527
29	23.8	1.7	5.9	chr18	9475572	9475687	(70897598)	+	(GGC)n	Simple_repeat	1	118	(0)	1703111
551	22.5	2.8	3.5	chr18	10243336	10243478	(70129807)	+	MLT1J	LTR/ERVL-MaLR	1	142	(370)	1704303
1206	27.1	7.0	2.6	chr18	10243612	10244076	(70129209)	+	Charlie4a	DNA/hAT-Charlie	2	488	(20)	1704304
19	28.8	1.5	0.0	chr18	11689657	11689723	(68683562)	+	(CCGGCC)n	Simple_repeat	1	68	(0)	1706192
1182	28.4	6.0	1.0	chr18	22634375	22634783	(57738502)	+	MLT2F	LTR/ERVL	4	434	(229)	1714811
1053	28.7	2.3	1.2	chr18	22634792	22635133	(57738152)	C	L1ME3B	LINE/L1	(368)	5874	5529	1714812
2185	11.3	0.0	0.0	chr18	23679973	23680264	(56693021)	C	AluSq2	SINE/Alu	(13)	300	9	1716666
361	22.7	0.0	1.3	chr18	23680277	23680352	(56692933)	C	MLT1J	LTR/ERVL-MaLR	(336)	176	102	1716667
2827	11.6	9.3	0.0	chr18	24381038	24381475	(55991810)	C	MER31A	LTR/ERV1	(2)	483	1	1717837
1063	25.9	10.6	0.3	chr18	24683911	24684274	(55689011)	C	MLT1J2	LTR/ERVL-MaLR	(42)	406	1	1718338
1287	27.7	7.6	4.2	chr18	25503363	25503935	(54869350)	C	MLT2F	LTR/ERVL	(69)	594	1	1719422
906	29.1	12.1	4.6	chr18	27351251	27351729	(53021556)	+	LTR33A	LTR/ERVL	1	520	(0)	1722291
264	28.7	3.1	2.1	chr18	29148037	29148132	(51225153)	+	LTR67B	LTR/ERVL	87	183	(437)	1724686
3054	12.7	1.8	2.5	chr18	34003761	34004405	(46368880)	+	MER4B	LTR/ERV1	1	900	(0)	1731395
525	25.7	7.5	1.7	chr18	34647367	34647564	(45725721)	C	MLT1J1	LTR/ERVL-MaLR	(204)	244	34	1732226
894	14.5	0.0	0.8	chr18	35266997	35267113	(45106172)	+	AluJo	SINE/Alu	1	116	(196)	1733076
27	0.0	0.0	0.0	chr18	35343851	35343876	(45029409)	+	(CCCGGC)n	Simple_repeat	1	26	(0)	1733185
15	4.2	4.0	0.0	chr18	35376959	35376983	(44996302)	+	(CCGCG)n	Simple_repeat	1	26	(0)	1733224
12046	8.9	0.1	0.4	chr18	35487664	35489246	(44884039)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	1733391
13	16.8	0.0	5.4	chr18	45837920	45837956	(34535329)	+	(CCCG)n	Simple_repeat	1	37	(0)	1747505
257	15.2	2.1	0.0	chr18	45838054	45838099	(34535186)	+	MER5A1	DNA/hAT-Charlie	38	84	(82)	1747506
1381	29.2	3.9	1.1	chr18	46324475	46324944	(34048341)	C	MLT1J	LTR/ERVL-MaLR	(28)	484	1	1748454
1222	25.3	17.0	1.9	chr18	46660886	46661353	(33711932)	C	MLT1N2	LTR/ERVL-MaLR	(4)	558	6	1749029
1116	27.3	10.5	2.6	chr18	46794672	46795133	(33578152)	+	MLT1J	LTR/ERVL-MaLR	1	503	(9)	1749271
28	11.3	1.5	6.1	chr18	48539080	48539144	(31834141)	+	(CCTC)n	Simple_repeat	1	66	(0)	1752077
1779	12.8	0.3	7.3	chr18	49460833	49461145	(30912140)	+	AluSc	SINE/Alu	2	292	(17)	1753566
12	23.4	2.5	0.0	chr18	51654684	51654723	(28718562)	+	GA-rich	Low_complexity	1	41	(0)	1757324
370	30.2	2.4	3.0	chr18	51654732	51654898	(28718387)	+	UCON5	Unknown	219	384	(52)	1757325
20	21.3	1.6	3.1	chr18	56638607	56638669	(23734616)	+	G-rich	Low_complexity	1	64	(0)	1764412
1591	23.7	8.9	1.5	chr18	57522437	57522843	(22850442)	+	MLT1J2	LTR/ERVL-MaLR	1	440	(8)	1765672
762	23.4	0.6	0.6	chr18	58161827	58161994	(22211291)	C	MLT1J1	LTR/ERVL-MaLR	(262)	182	15	1766907
274	32.2	7.6	6.5	chr18	58162110	58162355	(22210930)	+	L2a	LINE/L2	2717	2965	(454)	1766908
316	27.6	9.4	2.0	chr18	59232247	59232394	(21140891)	C	MLT1N2	LTR/ERVL-MaLR	(7)	555	396	1768646
13	28.0	0.0	2.0	chr18	59232442	59232490	(21140795)	+	(CTGCCT)n	Simple_repeat	1	49	(0)	1768647
345	22.8	2.3	8.0	chr18	59232491	59232628	(21140657)	C	LTR67B	LTR/ERVL	(414)	206	77	1768648
498	29.8	2.3	1.7	chr18	59232537	59232710	(21140575)	C	MLT1N2	LTR/ERVL-MaLR	(370)	192	18	1768646
1345	24.8	10.8	0.3	chr18	59416777	59417132	(20956153)	C	MLT1J	LTR/ERVL-MaLR	(114)	398	1	1768907
1976	12.8	0.0	5.6	chr18	59417350	59417654	(20955631)	C	AluSx	SINE/Alu	(24)	288	1	1768909
17	3.2	0.0	10.3	chr18	59899887	59899925	(20473360)	+	(GCGGG)n	Simple_repeat	1	39	(0)	1769753
16	20.1	4.3	0.0	chr18	59900267	59900312	(20472973)	+	(GGCCGG)n	Simple_repeat	1	48	(0)	1769754
208	32.9	2.1	1.8	chr18	62186367	62186485	(18186800)	+	MIR3	SINE/MIR	108	232	(36)	1773093
23	20.3	7.6	0.0	chr18	62187169	62187247	(18186038)	+	G-rich	Low_complexity	1	85	(0)	1773094
996	18.4	14.4	1.8	chr18	63078764	63079120	(17294165)	C	L1MC5a	LINE/L1	(1436)	1341	1017	1774519
381	34.6	7.6	0.6	chr18	63079283	63079465	(17293820)	C	LTR33B	LTR/ERVL	(306)	197	1	1774520
1414	22.5	9.4	3.8	chr18	63079485	63079987	(17293298)	C	L1M5	LINE/L1	(1980)	4166	3633	1774521
1342	20.5	1.2	10.9	chr18	74037417	74037746	(6335539)	C	MLT1B	LTR/ERVL-MaLR	(52)	338	42	1789385
597	30.3	5.4	1.9	chr18	75478033	75478298	(4894987)	C	MLT1J	LTR/ERVL-MaLR	(236)	276	1	1791054
19	23.3	0.0	1.9	chr18	76822668	76822720	(3550565)	+	(GCCCGC)n	Simple_repeat	1	53	(0)	1792730
16	14.8	0.0	4.9	chr18	76822738	76822778	(3550507)	+	G-rich	Low_complexity	1	41	(0)	1792731
19	11.7	4.0	3.9	chr18	76822895	76822944	(3550341)	+	G-rich	Low_complexity	1	52	(0)	1792732
2407	7.4	0.0	0.0	chr18	79611830	79612138	(761147)	+	AluY	SINE/Alu	1	309	(2)	1795612
27	19.2	5.9	3.7	chr19	344864	344965	(58272651)	+	G-rich	Low_complexity	1	108	(0)	1796772
229	31.4	12.3	0.8	chr19	345134	345255	(58272361)	C	MIRb	SINE/MIR	(107)	161	24	1796773
15	10.8	3.3	0.0	chr19	633539	633568	(57984048)	+	(CCGCGC)n	Simple_repeat	1	31	(0)	1797259
19	7.8	0.0	0.0	chr19	633790	633799	(57983817)	+	(T)n	Simple_repeat	1	10	(0)	1797260
2502	7.1	0.7	0.0	chr19	779736	780044	(57837572)	+	AluY	SINE/Alu	1	311	(0)	1797594
226	26.1	0.0	4.2	chr19	780045	780059	(57837557)	+	L1MB7	LINE/L1	5937	5950	(229)	1797593
458	27.2	8.6	2.4	chr19	780048	780254	(57837362)	C	L1MB5	LINE/L1	(27)	6147	5927	1797595
2580	5.7	0.0	1.6	chr19	780257	780598	(57837018)	C	AluY	SINE/Alu	(0)	311	1	1797596
962	0.9	0.0	0.9	chr19	893484	893585	(57724031)	+	U6	snRNA	1	102	(5)	1797832
2278	12.0	0.3	0.0	chr19	893586	893894	(57723722)	C	AluSg	SINE/Alu	(0)	310	1	1797833
18	20.6	2.9	5.6	chr19	1021040	1021108	(57596508)	+	(CGC)n	Simple_repeat	1	71	(0)	1798080
1009	0.0	0.0	0.0	chr19	1021522	1021628	(57595988)	+	U6	snRNA	1	107	(0)	1798081
381	30.4	4.8	2.1	chr19	1113958	1114098	(57503518)	+	MIR	SINE/MIR	42	186	(76)	1798239
575	14.7	1.6	10.1	chr19	1241392	1241549	(57376067)	C	FLAM_C	SINE/Alu	(90)	212	7	1798452
12	22.4	1.9	5.7	chr19	1248809	1248860	(57368756)	+	(GCCCC)n	Simple_repeat	1	53	(0)	1798465
24	14.8	1.9	1.8	chr19	1275563	1275616	(57342000)	+	(TGCTGC)n	Simple_repeat	1	55	(0)	1798487
183	30.9	0.0	1.8	chr19	1311976	1312031	(57305585)	+	OldhAT1	DNA/hAT-Ac	1495	1549	(1299)	1798545
2479	7.9	0.0	0.0	chr19	1312079	1312381	(57305235)	+	AluSq2	SINE/Alu	1	303	(10)	1798546
22	10.7	8.0	0.0	chr19	1407283	1407349	(57210267)	+	(CGCA)n	Simple_repeat	1	72	(0)	1798747
17	25.0	1.9	0.0	chr19	1446649	1446700	(57170916)	+	(GCGGCG)n	Simple_repeat	1	53	(0)	1798794
252	34.6	2.7	0.0	chr19	1476515	1476621	(57140995)	+	MER3	DNA/hAT-Charlie	1	110	(99)	1798831
12	36.9	0.0	0.0	chr19	1490253	1490314	(57127302)	+	G-rich	Low_complexity	1	62	(0)	1798867
13	19.4	0.0	2.7	chr19	1490332	1490368	(57127248)	+	G-rich	Low_complexity	1	37	(0)	1798867
1864	18.1	1.6	0.0	chr19	1587405	1587708	(57029908)	C	AluJr4	SINE/Alu	(2)	310	2	1799081
29	2.6	5.1	0.0	chr19	1592382	1592420	(57025196)	+	(CACG)n	Simple_repeat	1	41	(0)	1799091
15	21.8	0.0	5.7	chr19	1592422	1592474	(57025142)	+	G-rich	Low_complexity	1	53	(0)	1799092
16	19.3	0.0	4.4	chr19	1848420	1848464	(56769152)	+	(CGC)n	Simple_repeat	1	45	(0)	1799618
512	20.5	17.4	0.0	chr19	1883221	1883391	(56734225)	+	MER20	DNA/hAT-Charlie	4	210	(9)	1799663
14	8.3	0.0	3.6	chr19	1905230	1905257	(56712359)	+	(CGGGG)n	Simple_repeat	1	28	(0)	1799731
190	29.4	13.3	1.2	chr19	1937563	1937648	(56679968)	C	L2c	LINE/L2	(233)	3154	3057	1799800
729	24.7	8.3	1.0	chr19	2124097	2124407	(56493209)	+	MER68	LTR/ERVL	125	460	(103)	1800173
1822	13.6	4.6	1.0	chr19	2237136	2237429	(56380187)	+	AluJr	SINE/Alu	1	305	(7)	1800384
13	21.2	1.8	7.0	chr19	2269498	2269553	(56348063)	+	(GGC)n	Simple_repeat	1	57	(0)	1800444
13	17.7	3.1	0.0	chr19	2328712	2328743	(56288873)	+	(GGC)n	Simple_repeat	1	33	(0)	1800571
20	2.9	5.4	2.6	chr19	2456939	2456997	(56160619)	+	(GCGCC)n	Simple_repeat	1	60	(0)	1800828
203	22.0	0.0	2.0	chr19	2457086	2457136	(56160480)	+	MIR	SINE/MIR	24	73	(189)	1800829
193	27.1	0.0	0.0	chr19	2461992	2462050	(56155566)	+	L2b	LINE/L2	3036	3094	(281)	1800844
233	33.3	2.0	0.0	chr19	2462447	2462542	(56155074)	C	MIR	SINE/MIR	(118)	144	47	1800845
2350	8.5	0.6	2.2	chr19	2462582	2462899	(56154717)	+	AluSq2	SINE/Alu	1	313	(0)	1800846
732	18.6	1.8	1.8	chr19	2740424	2740587	(55877029)	+	L1MA8	LINE/L1	6029	6192	(99)	1801562
337	34.4	11.0	2.4	chr19	2785868	2786206	(55831410)	C	L2a	LINE/L2	(1)	3425	3054	1801656
1112	13.0	0.0	1.2	chr19	2817031	2817191	(55800425)	+	AluSz6	SINE/Alu	1	159	(153)	1801700
632	7.7	5.8	0.1	chr19	2817250	2817355	(55800261)	C	LTR10A	LTR/ERV1	(62)	547	395	1801701
1593	12.3	1.1	0.0	chr19	2817465	2817725	(55799891)	C	LTR10A	LTR/ERV1	(167)	442	179	1801701
320	17.8	1.4	0.0	chr19	2817735	2817807	(55799809)	C	LTR10A	LTR/ERV1	(354)	255	182	1801702
364	18.4	0.0	4.4	chr19	2817807	2817897	(55799719)	C	LTR10A	LTR/ERV1	(344)	265	179	1801702
257	21.8	0.0	0.0	chr19	2888658	2888712	(55728904)	+	Tigger3c	DNA/TcMar-Tigger	341	395	(207)	1801860
15	21.2	0.0	4.3	chr19	3036342	3036388	(55581228)	+	(CTCC)n	Simple_repeat	1	47	(0)	1802227
519	23.1	1.7	1.7	chr19	3185311	3185429	(55432187)	C	L2a	LINE/L2	(0)	3426	3308	1802593
24	16.1	6.5	0.0	chr19	3185963	3186024	(55431592)	+	(CCG)n	Simple_repeat	1	66	(0)	1802594
278	26.2	2.8	0.0	chr19	3364586	3364679	(55252937)	C	MIR	SINE/MIR	(61)	201	108	1803064
13	23.7	3.9	1.9	chr19	3444575	3444625	(55172991)	+	(CCTGC)n	Simple_repeat	1	53	(0)	1803308
47	29.2	6.9	4.1	chr19	3444802	3445205	(55172411)	+	(CATG)n	Simple_repeat	1	415	(0)	1803309
23	44.8	0.0	1.4	chr19	3445105	3445242	(55172374)	+	(ACAC)n	Simple_repeat	1	138	(0)	1803310
1070	21.7	5.9	0.0	chr19	3743405	3743611	(54874005)	C	MER58A	DNA/hAT-Charlie	(0)	224	5	1803936
568	28.4	5.9	1.2	chr19	3743651	3743892	(54873724)	C	MLT1J	LTR/ERVL-MaLR	(253)	259	6	1803937
18	30.6	3.9	1.9	chr19	3868848	3868950	(54748666)	+	(GGCTGG)n	Simple_repeat	1	107	(0)	1804194
22	27.1	1.1	4.2	chr19	3869029	3869056	(54748560)	+	(CCCCGCG)n	Simple_repeat	1	75	(21)	1804195
13	26.1	4.9	1.6	chr19	3869057	3869117	(54748499)	+	(CCCGC)n	Simple_repeat	1	64	(0)	1804196
22	27.1	1.1	4.2	chr19	3869118	3869123	(54748493)	+	(CCCCGCG)n	Simple_repeat	76	96	(0)	1804195
481	18.8	7.9	0.8	chr19	3990360	3990477	(54627139)	C	MLT1J	LTR/ERVL-MaLR	(319)	193	67	1804488
31	21.4	0.0	4.4	chr19	3990478	3990494	(54627122)	+	(TCTTTTT)n	Simple_repeat	1	17	(0)	1804489
2439	8.9	0.0	0.3	chr19	3990495	3990808	(54626808)	C	AluSq	SINE/Alu	(0)	313	1	1804490
1066	14.2	0.0	0.0	chr19	4180094	4180270	(54437346)	C	AluSx1	SINE/Alu	(0)	312	135	1804959
414	15.7	0.0	0.0	chr19	4180285	4180354	(54437262)	+	MLT1J	LTR/ERVL-MaLR	100	169	(343)	1804960
1813	10.8	1.2	0.0	chr19	4180385	4180624	(54436992)	C	AluSx4	SINE/Alu	(13)	297	55	1804961
247	26.7	17.2	1.9	chr19	4304381	4304483	(54313133)	C	MIRc	SINE/MIR	(128)	140	19	1805322
2342	10.3	0.0	0.0	chr19	4431127	4431427	(54186189)	C	AluSz	SINE/Alu	(10)	302	2	1805573
22	19.1	9.4	2.6	chr19	4723560	4723665	(53893951)	+	G-rich	Low_complexity	1	116	(0)	1806263
646	1.4	0.0	0.0	chr19	4724070	4724141	(53893475)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1806264
1937	7.9	0.3	12.5	chr19	4724169	4724496	(53893120)	C	AluSx	SINE/Alu	(14)	298	11	1806265
1056	12.8	0.7	0.0	chr19	4815489	4815637	(53801979)	C	AluJo	SINE/Alu	(77)	235	86	1806549
595	25.1	5.1	1.8	chr19	4815656	4815825	(53801791)	+	MLT1J	LTR/ERVL-MaLR	27	202	(310)	1806550
609	25.6	9.0	0.1	chr19	5057937	5058136	(53559480)	C	MLT1J1	LTR/ERVL-MaLR	(188)	256	38	1807152
18	27.3	0.0	3.1	chr19	5340835	5340899	(53276717)	+	(CCG)n	Simple_repeat	1	65	(0)	1807706
19	21.2	0.0	0.0	chr19	5341053	5341096	(53276520)	+	(GGC)n	Simple_repeat	1	44	(0)	1807707
2261	13.4	0.0	0.6	chr19	5403722	5404035	(53213581)	+	AluSx	SINE/Alu	1	312	(0)	1807888
16	3.2	5.6	5.3	chr19	5404039	5404104	(53213512)	+	(AAAGA)n	Simple_repeat	1	66	(0)	1807889
22	28.0	4.7	0.0	chr19	5404105	5404120	(53213496)	+	GA-rich	Low_complexity	4	89	(0)	1807890
464	24.2	2.0	0.0	chr19	5407526	5407624	(53209992)	+	MLT1J1	LTR/ERVL-MaLR	62	162	(282)	1807898
1545	20.8	15.4	0.9	chr19	5407644	5408031	(53209585)	C	MLT1D	LTR/ERVL-MaLR	(26)	479	56	1807899
1458	26.0	3.6	0.0	chr19	5452947	5453315	(53164301)	+	MLT1J	LTR/ERVL-MaLR	23	405	(107)	1808033
184	25.9	5.8	5.8	chr19	5680276	5680361	(52937255)	+	MIR3	SINE/MIR	86	171	(37)	1808576
223	26.6	9.2	5.2	chr19	5719463	5719577	(52898039)	C	MIR3	SINE/MIR	(36)	172	53	1808642
12	27.7	2.0	2.0	chr19	5719822	5719871	(52897745)	+	(CCG)n	Simple_repeat	1	51	(0)	1808643
23	18.3	4.7	1.5	chr19	6424702	6424765	(52192851)	+	(GGC)n	Simple_repeat	1	67	(0)	1810203
807	23.0	7.1	0.9	chr19	6604065	6604275	(52013341)	C	MLT1J	LTR/ERVL-MaLR	(236)	276	52	1810687
434	22.9	0.7	6.0	chr19	6604294	6604442	(52013174)	C	MER96B	DNA/hAT-Tip100	(36)	381	241	1810688
195	33.6	6.3	0.9	chr19	6738118	6738222	(51879394)	+	AmnSINE2	SINE/tRNA-Deu	20	130	(228)	1811027
242	24.4	0.9	10.2	chr19	6761048	6761110	(51856506)	C	MamRep1879	DNA/hAT-Tip100?	(35)	181	125	1811080
1068	28.3	11.0	0.5	chr19	6761111	6761508	(51856108)	+	MLT1J2	LTR/ERVL-MaLR	4	448	(0)	1811081
626	26.5	11.9	5.6	chr19	6811776	6812205	(51805411)	C	MLT1J2	LTR/ERVL-MaLR	(8)	440	4	1811237
31	8.3	2.0	0.0	chr19	7197322	7197372	(51420244)	+	(GAGT)n	Simple_repeat	1	52	(0)	1812249
82	30.6	1.8	0.3	chr19	7197505	7197782	(51419834)	+	(GT)n	Simple_repeat	1	283	(0)	1812250
311	29.1	4.6	5.5	chr19	7505625	7505733	(51111883)	C	L2b	LINE/L2	(315)	3111	3001	1813082
325	29.8	1.7	4.2	chr19	7505745	7505863	(51111753)	+	MIRb	SINE/MIR	85	200	(68)	1813102
185	23.8	0.0	0.0	chr19	7505845	7505886	(51111730)	C	MIRc	SINE/MIR	(142)	126	85	1813103
12	29.4	4.8	0.0	chr19	7515875	7515936	(51101680)	+	G-rich	Low_complexity	1	65	(0)	1813127
1352	18.6	4.3	0.1	chr19	7562695	7562974	(51054642)	C	L1MC2	LINE/L1	(514)	5830	5540	1813209
205	39.7	2.3	0.8	chr19	7563149	7563275	(51054341)	+	L2c	LINE/L2	2911	3039	(348)	1813212
13	26.8	1.8	3.5	chr19	7925605	7925661	(50691955)	+	(CCT)n	Simple_repeat	1	58	(0)	1813983
1003	15.8	1.2	0.0	chr19	7944483	7944640	(50672976)	C	AluJo	SINE/Alu	(15)	297	138	1814012
426	27.2	15.8	1.4	chr19	8252855	8253040	(50364576)	+	MIRb	SINE/MIR	21	247	(21)	1814831
1446	6.9	0.0	5.5	chr19	8253450	8253651	(50363965)	C	AluYf1	SINE/Alu	(8)	303	113	1814832
12	22.0	4.8	4.5	chr19	8444846	8444908	(50172708)	+	G-rich	Low_complexity	1	66	(0)	1815352
14	26.3	0.0	0.0	chr19	8445001	8445041	(50172575)	+	(GGC)n	Simple_repeat	1	41	(0)	1815353
686	27.0	4.4	5.3	chr19	9139913	9140213	(49477403)	C	L1MC4	LINE/L1	(578)	7464	7167	1816897
430	25.0	6.0	2.1	chr19	9140307	9140449	(49477167)	+	LTR33B	LTR/ERVL	77	225	(278)	1816898
202	22.7	8.5	11.0	chr19	9140769	9140877	(49476739)	C	L2	LINE/L2	(1379)	2040	1935	1816899
13	16.8	0.0	5.4	chr19	9835104	9835140	(48782476)	+	G-rich	Low_complexity	1	37	(0)	1818234
16	21.6	3.1	4.5	chr19	9835271	9835334	(48782282)	+	(GGCGGC)n	Simple_repeat	1	66	(0)	1818235
1122	11.8	0.0	0.0	chr19	9917185	9917336	(48700280)	C	AluJo	SINE/Alu	(23)	289	138	1818438
212	30.8	5.5	7.7	chr19	9917337	9917366	(48700250)	+	L2a	LINE/L2	3121	3146	(280)	1818437
1216	24.8	18.1	1.5	chr19	9917378	9917786	(48699830)	+	LTR33A	LTR/ERVL	27	518	(2)	1818439
915	30.4	3.6	12.4	chr19	9939565	9939991	(48677625)	+	LTR33A	LTR/ERVL	22	403	(117)	1818504
54	0.0	1.9	1.8	chr19	10009152	10009205	(48608411)	+	(GT)n	Simple_repeat	1	55	(0)	1818678
398	26.5	10.2	2.2	chr19	10044261	10044395	(48573221)	+	MIRb	SINE/MIR	35	181	(87)	1818751
639	21.7	6.9	0.6	chr19	10044561	10044722	(48572894)	C	MLT1J	LTR/ERVL-MaLR	(329)	183	11	1818752
482	25.2	12.2	2.0	chr19	10044746	10044925	(48572691)	C	MIRb	SINE/MIR	(0)	262	62	1818753
1104	31.9	5.5	4.7	chr19	10045181	10045670	(48571946)	C	LTR33B	LTR/ERVL	(1)	502	9	1818754
404	26.4	8.8	5.3	chr19	10045748	10045788	(48571828)	+	MIR	SINE/MIR	3	45	(185)	1818755
2232	11.0	0.0	0.0	chr19	10045789	10046078	(48571538)	+	AluSx1	SINE/Alu	6	295	(17)	1818756
313	18.2	0.0	6.1	chr19	10368592	10368673	(48248943)	+	MLT1J2	LTR/ERVL-MaLR	51	127	(321)	1819552
2255	10.8	0.7	0.0	chr19	10368814	10369108	(48248508)	C	AluSx	SINE/Alu	(15)	297	1	1819553
2531	6.5	0.0	0.0	chr19	10482536	10482842	(48134774)	+	AluY	SINE/Alu	1	307	(4)	1819867
239	35.4	8.3	1.0	chr19	10692710	10692809	(47924807)	C	L2b	LINE/L2	(21)	3354	3247	1820430
189	30.4	7.2	4.2	chr19	10692862	10693137	(47924479)	C	L2b	LINE/L2	(265)	3110	2830	1820430
2086	12.0	2.3	0.0	chr19	10693172	10693471	(47924145)	C	AluSp	SINE/Alu	(5)	308	2	1820431
216	35.6	3.8	0.0	chr19	10701796	10701896	(47915720)	C	L2b	LINE/L2	(6)	3369	3265	1820456
215	32.5	6.6	2.6	chr19	10836752	10836868	(47780748)	+	MIR	SINE/MIR	112	233	(29)	1820785
521	25.0	6.3	2.6	chr19	10837002	10837211	(47780405)	+	MIRb	SINE/MIR	28	268	(0)	1820786
1018	27.9	3.0	9.2	chr19	10879087	10879437	(47738179)	C	MLT1J	LTR/ERVL-MaLR	(159)	353	17	1820907
408	30.9	1.3	2.9	chr19	11155168	11155333	(47462283)	C	MIR	SINE/MIR	(41)	189	28	1821595
202	28.9	3.1	0.9	chr19	11155406	11155527	(47462089)	C	MIR1_Amn	SINE/MIR	(79)	189	63	1821596
1032	31.5	6.1	1.8	chr19	11490697	11491136	(47126480)	+	L2a	LINE/L2	2295	2754	(665)	1822458
583	19.2	5.8	0.8	chr19	11491157	11491287	(47126329)	+	MLT1J1	LTR/ERVL-MaLR	1	138	(306)	1822461
214	33.3	0.0	0.0	chr19	12718727	12718789	(45898827)	C	L3	LINE/CR1	(487)	3612	3550	1825072
433	27.9	12.2	1.1	chr19	12718799	12718979	(45898637)	+	MIR	SINE/MIR	13	216	(46)	1825073
2492	6.1	1.3	0.6	chr19	12734856	12735166	(45882450)	C	AluSp	SINE/Alu	(0)	313	1	1825107
189	30.8	20.4	0.6	chr19	12796429	12796585	(45821031)	C	MIRb	SINE/MIR	(56)	212	17	1825226
13	3.1	15.2	0.0	chr19	12801855	12801887	(45815729)	+	(CGGAG)n	Simple_repeat	1	38	(0)	1825239
16	29.8	1.6	0.0	chr19	12806495	12806555	(45811061)	+	(GCAGCG)n	Simple_repeat	1	62	(0)	1825249
449	15.3	0.0	1.2	chr19	12885149	12885234	(45732382)	+	MER96	DNA/hAT-Tip100	3	87	(88)	1825449
16	28.2	0.0	0.0	chr19	13024708	13024721	(45592895)	+	(GTGA)n	Simple_repeat	1	26	(25)	1825775
17	12.5	0.0	0.0	chr19	13024722	13024747	(45592869)	+	(GA)n	Simple_repeat	1	26	(0)	1825776
16	28.2	0.0	0.0	chr19	13024748	13024758	(45592858)	+	(GTGA)n	Simple_repeat	27	51	(0)	1825775
18	25.8	2.7	2.7	chr19	13209211	13209283	(45408333)	+	(CCTCT)n	Simple_repeat	1	75	(0)	1826149
402	25.3	7.8	1.3	chr19	13396759	13396914	(45220702)	+	LTR33	LTR/ERVL	49	215	(300)	1826650
1018	24.0	3.7	6.2	chr19	13401518	13401844	(45215772)	+	MLT1J1	LTR/ERVL-MaLR	63	355	(89)	1826662
461	29.9	6.0	1.6	chr19	13420863	13421052	(45196564)	+	MLT1J	LTR/ERVL-MaLR	1	199	(313)	1826724
300	19.4	1.6	0.0	chr19	13557908	13557969	(45059647)	+	MLT1J2	LTR/ERVL-MaLR	47	109	(335)	1827095
1019	17.9	6.4	0.0	chr19	13558017	13558234	(45059382)	C	Tigger3b	DNA/TcMar-Tigger	(193)	1038	806	1827096
1899	21.2	4.9	1.8	chr19	13672267	13672546	(44945070)	+	MLT1C	LTR/ERVL-MaLR	181	467	(0)	1827452
540	25.3	8.6	1.3	chr19	13672634	13672814	(44944802)	+	MLT1J	LTR/ERVL-MaLR	32	199	(313)	1827454
2053	12.9	0.4	0.0	chr19	13672815	13673119	(44944497)	C	AluSx	SINE/Alu	(0)	312	3	1827455
225	32.9	0.0	0.0	chr19	13689150	13689234	(44928382)	+	MamRep137	DNA/TcMar-Tigger	426	510	(0)	1827500
743	23.2	21.4	2.0	chr19	13689274	13689576	(44928040)	+	MLT1J1	LTR/ERVL-MaLR	66	443	(1)	1827501
237	31.7	2.1	0.9	chr19	13731949	13732059	(44885557)	+	MIRb	SINE/MIR	79	196	(72)	1827637
620	27.0	10.4	2.4	chr19	13921004	13921440	(44696176)	C	MLT1J	LTR/ERVL-MaLR	(0)	448	2	1828127
196	34.3	4.1	0.0	chr19	13921463	13921532	(44696084)	+	MIRb	SINE/MIR	117	189	(79)	1828128
431	19.1	2.3	0.0	chr19	13921622	13921705	(44695911)	C	MLT1J	LTR/ERVL-MaLR	(327)	185	100	1828129
569	20.8	0.0	1.4	chr19	13921733	13921867	(44695749)	+	FLAM_C	SINE/Alu	3	221	(81)	1828130
298	23.2	0.0	9.5	chr19	14118537	14118631	(44498985)	C	MIR	SINE/MIR	(69)	193	108	1828627
809	26.1	3.2	3.6	chr19	14118741	14118959	(44498657)	C	MER20	DNA/hAT-Charlie	(0)	219	2	1828628
12	21.6	0.0	0.0	chr19	14136479	14136510	(44481106)	+	G-rich	Low_complexity	1	32	(0)	1828671
2457	4.6	0.0	0.0	chr19	14227475	14227757	(44389859)	+	AluY	SINE/Alu	1	283	(28)	1828877
57	0.0	0.0	0.0	chr19	14227758	14227808	(44389808)	+	(AAAT)n	Simple_repeat	1	51	(0)	1828878
16	10.8	0.0	3.1	chr19	14482239	14482270	(44135346)	+	(TCCA)n	Simple_repeat	1	32	(0)	1829602
330	27.9	14.1	0.0	chr19	14497071	14497192	(44120424)	+	L2b	LINE/L2	3233	3374	(1)	1829647
14	18.2	2.6	2.5	chr19	14518366	14518404	(44099212)	+	(CCG)n	Simple_repeat	1	40	(0)	1829698
12	11.9	4.8	6.8	chr19	14518474	14518515	(44099101)	+	(CCG)n	Simple_repeat	1	44	(0)	1829699
2125	12.2	0.0	0.7	chr19	14571314	14571616	(44046000)	+	AluSz	SINE/Alu	1	301	(11)	1829823
659	24.1	12.4	4.9	chr19	14632342	14632773	(43984843)	+	MLT1J	LTR/ERVL-MaLR	1	444	(4)	1830001
28	23.7	4.8	5.2	chr19	14690058	14690206	(43927410)	+	(GCGCG)n	Simple_repeat	1	148	(0)	1830169
13	26.1	1.7	3.4	chr19	15223668	15223725	(43393891)	+	(CAACCGT)n	Simple_repeat	1	59	(0)	1831424
14	21.2	0.0	7.1	chr19	15379968	15380023	(43237593)	+	(GCCCC)n	Simple_repeat	1	56	(0)	1831697
16	30.9	1.4	1.4	chr19	15380240	15380308	(43237308)	+	(GGC)n	Simple_repeat	1	70	(0)	1831698
12	29.3	5.3	1.2	chr19	16628095	16628170	(41989446)	+	(GGAGCC)n	Simple_repeat	1	80	(0)	1834292
18	10.0	0.0	2.9	chr19	16628152	16628185	(41989431)	+	(GCC)n	Simple_repeat	1	34	(0)	1834293
290	25.2	2.9	0.0	chr19	16628871	16628969	(41988647)	C	MER20	DNA/hAT-Charlie	(3)	216	115	1834294
636	28.9	15.2	1.9	chr19	17069717	17070357	(41547259)	+	L2a	LINE/L2	1387	2128	(1291)	1835426
337	33.0	12.3	0.5	chr19	17070597	17070782	(41546834)	+	L2a	LINE/L2	3214	3424	(2)	1835426
15	20.5	1.8	5.3	chr19	17235213	17235268	(41382348)	+	G-rich	Low_complexity	1	57	(0)	1835809
13	24.4	2.2	2.1	chr19	17235853	17235898	(41381718)	+	(CCG)n	Simple_repeat	1	47	(0)	1835810
1957	7.2	12.0	0.0	chr19	17308971	17309234	(41308382)	C	AluSq2	SINE/Alu	(13)	300	1	1835998
24	28.9	0.0	0.0	chr19	17309575	17309645	(41307971)	+	(GGC)n	Simple_repeat	1	71	(0)	1835999
997	7.9	0.0	0.0	chr19	17419595	17419721	(41197895)	C	AluSc	SINE/Alu	(182)	127	1	1836293
757	26.4	8.8	8.6	chr19	17522842	17523041	(41094575)	C	MLT1C	LTR/ERVL-MaLR	(284)	183	7	1836583
2139	13.6	0.0	0.0	chr19	17610184	17610485	(41007131)	+	AluJb	SINE/Alu	1	302	(10)	1836822
698	29.2	5.5	9.0	chr19	17610524	17610748	(41006868)	+	MLT1J	LTR/ERVL-MaLR	97	321	(191)	1836823
1890	16.4	0.0	1.6	chr19	17610749	17611058	(41006558)	+	AluJr	SINE/Alu	3	307	(5)	1836824
749	28.3	14.1	4.9	chr19	17671903	17672330	(40945286)	+	MLT1J	LTR/ERVL-MaLR	1	474	(38)	1836968
214	29.8	7.5	5.3	chr19	17865921	17866051	(40751565)	+	MIRb	SINE/MIR	104	237	(31)	1837470
306	30.1	7.0	0.9	chr19	18168035	18168172	(40449444)	C	MIRb	SINE/MIR	(33)	235	84	1838265
388	27.5	12.7	3.6	chr19	18168411	18168659	(40448957)	C	L2b	LINE/L2	(43)	3332	3058	1838266
12	30.8	3.3	0.0	chr19	18193506	18193565	(40424051)	+	(GACCCCT)n	Simple_repeat	1	62	(0)	1838335
17	15.3	2.6	0.0	chr19	18203591	18203628	(40413988)	+	(CGCGCA)n	Simple_repeat	1	39	(0)	1838357
218	32.5	19.1	1.7	chr19	18239368	18239539	(40378077)	+	MIR	SINE/MIR	15	223	(45)	1838438
1696	12.3	0.0	0.0	chr19	18239744	18239970	(40377646)	+	AluSz	SINE/Alu	1	227	(85)	1838439
14	22.2	0.0	8.2	chr19	18281546	18281606	(40336010)	+	(CGCC)n	Simple_repeat	1	61	(0)	1838529
20	7.2	0.0	0.0	chr19	18282216	18282245	(40335371)	+	(CCCT)n	Simple_repeat	1	30	(0)	1838530
311	26.9	6.3	2.5	chr19	18282357	18282478	(40335138)	C	MIR3	SINE/MIR	(52)	156	30	1838531
882	19.2	1.8	1.2	chr19	18522822	18522988	(40094628)	C	AluJb	SINE/Alu	(7)	305	138	1839005
12	17.4	0.0	8.7	chr19	18588917	18588962	(40028654)	+	G-rich	Low_complexity	1	46	(0)	1839178
1796	16.4	0.3	2.0	chr19	18592452	18592614	(40025002)	C	AluJr	SINE/Alu	(19)	293	136	1839182
2201	12.2	0.3	0.0	chr19	18592615	18592910	(40024706)	C	AluSp	SINE/Alu	(16)	297	1	1839183
12	16.1	0.0	7.5	chr19	18613230	18613269	(40004347)	+	G-rich	Low_complexity	1	40	(0)	1839222
12	20.2	4.1	3.9	chr19	18831910	18831958	(39785658)	+	(CGACGG)n	Simple_repeat	1	51	(0)	1839690
25	26.8	2.9	2.8	chr19	18831937	18832039	(39785577)	+	(CGG)n	Simple_repeat	1	106	(0)	1839691
16	22.7	3.0	4.3	chr19	18832095	18832161	(39785455)	+	(CCGCGG)n	Simple_repeat	1	69	(0)	1839692
16	3.2	5.6	5.3	chr19	18919308	18919343	(39698273)	+	(CCGGAGG)n	Simple_repeat	1	38	(0)	1839830
212	21.7	2.1	0.0	chr19	19175052	19175097	(39442519)	+	MIRc	SINE/MIR	102	148	(120)	1840419
2327	11.5	0.0	0.3	chr19	19175366	19175677	(39441939)	C	AluSx	SINE/Alu	(0)	312	2	1840420
209	30.3	3.3	3.3	chr19	19191934	19192025	(39425591)	C	MIR3	SINE/MIR	(116)	92	1	1840465
2515	4.5	1.0	0.3	chr19	20424328	20424619	(38192997)	C	AluY	SINE/Alu	(16)	295	2	1842627
436	16.2	1.2	1.2	chr19	28213598	28213678	(30403938)	+	MLT1J1	LTR/ERVL-MaLR	71	151	(293)	1848430
1023	29.4	2.8	0.7	chr19	28213671	28213951	(30403665)	C	MLT1J2	LTR/ERVL-MaLR	(118)	330	44	1848431
761	22.0	5.3	0.8	chr19	28213999	28214232	(30403384)	+	MER113	DNA/hAT-Charlie	233	477	(44)	1848432
16	12.9	9.3	0.0	chr19	28495095	28495137	(30122479)	+	GA-rich	Low_complexity	1	47	(0)	1848870
3413	6.0	1.1	0.0	chr19	28495329	28495357	(30122259)	+	L1P1	LINE/L1	4947	4977	(1169)	1848871
4319	3.9	0.2	0.8	chr19	28495358	28495879	(30121737)	C	L1PA5	LINE/L1	(0)	6154	5636	1848871
12	14.7	0.0	5.9	chr19	28793653	28793686	(29823930)	+	(GCCCC)n	Simple_repeat	1	34	(0)	1849234
524	24.8	0.8	0.0	chr19	29532183	29532311	(29085305)	C	MLT1J1	LTR/ERVL-MaLR	(251)	193	64	1850371
939	25.3	5.7	0.6	chr19	31220618	31220854	(27396762)	C	MLT1J2	LTR/ERVL-MaLR	(218)	294	15	1852918
13	21.4	3.9	3.7	chr19	32405916	32405967	(26211649)	+	(GGCG)n	Simple_repeat	1	54	(0)	1854737
132	29.9	3.0	4.3	chr19	32720117	32720840	(25896776)	+	(CCCACC)n	Simple_repeat	1	746	(0)	1855371
12	18.0	10.0	0.0	chr19	33302503	33302552	(25315064)	+	(CGCCCG)n	Simple_repeat	1	55	(0)	1856556
14	17.6	0.0	0.0	chr19	33302768	33302799	(25314817)	+	(CCGCCC)n	Simple_repeat	1	32	(0)	1856557
718	27.5	7.6	2.6	chr19	33640870	33641220	(24976396)	+	LTR16	LTR/ERVL	69	438	(0)	1857094
325	26.2	10.5	0.7	chr19	33767821	33767966	(24849650)	+	MamRep1879	DNA/hAT-Tip100?	51	212	(4)	1857283
12	23.8	2.2	2.1	chr19	34134452	34134497	(24483119)	+	G-rich	Low_complexity	1	47	(0)	1857971
36	2.5	2.4	0.0	chr19	34172434	34172474	(24445142)	+	(CGC)n	Simple_repeat	1	42	(0)	1858077
825	13.7	0.0	0.8	chr19	34404033	34404156	(24213460)	+	FLAM_C	SINE/Alu	11	133	(10)	1858560
423	20.0	0.0	0.0	chr19	34404168	34404242	(24213374)	C	L1MC5a	LINE/L1	(635)	2142	2068	1858561
322	35.6	8.0	0.0	chr19	35090684	35090832	(23526784)	C	MIR	SINE/MIR	(0)	262	101	1859690
12	14.6	0.0	5.9	chr19	35545823	35545856	(23071760)	+	G-rich	Low_complexity	1	34	(0)	1860636
2287	9.5	0.0	0.7	chr19	35607927	35608231	(23009385)	C	AluSp	SINE/Alu	(10)	303	1	1860761
353	20.0	1.2	6.6	chr19	35608232	35608249	(23009367)	C	MLT1J1	LTR/ERVL-MaLR	(68)	376	359	1860760
321	29.9	5.0	0.7	chr19	35608260	35608394	(23009222)	+	L2b	LINE/L2	3021	3161	(265)	1860762
672	24.8	13.6	3.5	chr19	35608431	35608660	(23008956)	+	MLT1J2	LTR/ERVL-MaLR	65	321	(127)	1860763
25	21.7	2.3	4.5	chr19	35717916	35718005	(22899611)	+	(GCCCC)n	Simple_repeat	1	88	(0)	1861037
217	34.9	1.1	2.3	chr19	35748107	35748194	(22869422)	+	MIRb	SINE/MIR	182	268	(0)	1861067
2148	10.7	0.7	2.3	chr19	35758661	35758970	(22858646)	C	AluSx1	SINE/Alu	(6)	306	2	1861079
560	27.5	5.9	2.8	chr19	36046725	36046937	(22570679)	+	MLT1J	LTR/ERVL-MaLR	4	223	(289)	1861755
13	14.0	0.0	5.7	chr19	36605285	36605319	(22012297)	+	(GCGCAG)n	Simple_repeat	1	35	(0)	1862876
320	20.9	2.9	0.0	chr19	36850363	36850429	(21767187)	C	MER67D	LTR/ERV1	(1)	513	445	1863382
711	18.1	11.3	3.1	chr19	36850413	36850663	(21766953)	C	MER31B	LTR/ERV1	(74)	392	1	1863383
11	20.5	5.1	0.0	chr19	37371221	37371259	(21246357)	+	G-rich	Low_complexity	1	41	(0)	1864324
312	32.2	10.0	3.8	chr19	37907541	37907884	(20709732)	+	MIRb	SINE/MIR	1	266	(2)	1865342
1192	19.6	14.2	3.0	chr19	37972724	37972901	(20644715)	C	Charlie4a	DNA/hAT-Charlie	(300)	208	26	1865508
729	25.5	1.5	1.5	chr19	37972904	37973098	(20644518)	C	MLT1J	LTR/ERVL-MaLR	(299)	213	19	1865503
747	28.5	6.0	7.1	chr19	38019144	38019589	(20598027)	C	MLT1J	LTR/ERVL-MaLR	(19)	493	15	1865632
404	27.6	13.4	4.2	chr19	38149712	38149900	(20467716)	C	MLT1J	LTR/ERVL-MaLR	(302)	210	2	1865963
1375	23.4	9.2	1.4	chr19	38162607	38162974	(20454642)	C	MLT1J2	LTR/ERVL-MaLR	(3)	445	46	1865996
899	30.8	13.4	0.7	chr19	38163044	38163207	(20454409)	C	L2a	LINE/L2	(0)	3426	3219	1865997
2346	11.2	0.0	0.0	chr19	38163208	38163511	(20454105)	+	AluSx1	SINE/Alu	1	304	(8)	1865998
25	34.7	0.0	0.0	chr19	38224430	38224568	(20393048)	+	(AC)n	Simple_repeat	1	139	(0)	1866146
17	11.6	0.0	7.0	chr19	38229706	38229748	(20387868)	+	G-rich	Low_complexity	1	43	(0)	1866161
967	18.1	3.4	7.0	chr19	38316237	38316451	(20301165)	+	AluJo	SINE/Alu	14	220	(92)	1866379
763	22.2	4.7	3.9	chr19	38316679	38316697	(20300919)	C	Arthur1C	DNA/hAT-Tip100	(91)	272	254	1866380
1579	16.0	10.9	0.4	chr19	38316698	38316960	(20300656)	C	AluJo	SINE/Alu	(18)	294	1	1866381
12	15.2	5.0	7.9	chr19	38949903	38949962	(19667654)	+	(CCCGGC)n	Simple_repeat	1	63	(0)	1867815
13	18.9	4.5	2.2	chr19	39032348	39032391	(19585225)	+	(TCCCCAG)n	Simple_repeat	1	46	(0)	1868053
294	36.1	5.5	0.6	chr19	39139714	39139869	(19477747)	C	MER5B	DNA/hAT-Charlie	(6)	172	9	1868365
288	35.9	6.5	0.0	chr19	39139891	39140035	(19477581)	C	MIR	SINE/MIR	(0)	262	108	1868366
12	14.6	0.0	5.9	chr19	39435800	39435833	(19181783)	+	(CCCTT)n	Simple_repeat	1	34	(0)	1869062
13	22.5	2.0	3.9	chr19	39834170	39834219	(18783397)	+	(CCTCC)n	Simple_repeat	1	51	(0)	1869713
22	13.4	0.0	0.0	chr19	40056660	40056693	(18560923)	+	(A)n	Simple_repeat	1	34	(0)	1870172
12	20.0	0.0	2.8	chr19	40191451	40191486	(18426130)	+	G-rich	Low_complexity	1	36	(0)	1870440
17	18.4	2.3	0.0	chr19	40218254	40218296	(18399320)	+	(CGAGCC)n	Simple_repeat	1	44	(0)	1870515
348	27.0	9.8	2.2	chr19	40285799	40285943	(18331673)	+	MIR	SINE/MIR	15	177	(91)	1870652
21	24.2	2.2	5.4	chr19	40513021	40513111	(18104505)	+	(GGC)n	Simple_repeat	1	93	(0)	1871282
982	15.4	9.4	5.5	chr19	40518944	40519197	(18098419)	C	Charlie1b	DNA/hAT-Charlie	(193)	330	66	1871300
184	26.8	15.7	1.1	chr19	40519252	40519338	(18098278)	C	MIRb	SINE/MIR	(118)	150	49	1871303
1058	28.9	11.8	5.0	chr19	41065020	41065405	(17552211)	+	MLT1J	LTR/ERVL-MaLR	6	435	(77)	1872531
22	18.4	0.0	2.0	chr19	41193287	41193337	(17424279)	+	(CGCTGC)n	Simple_repeat	1	51	(0)	1872844
1414	23.0	3.2	11.1	chr19	41249776	41250000	(17367616)	C	LTR33A	LTR/ERVL	(286)	234	45	1872993
647	30.0	10.5	5.1	chr19	42140487	42140837	(16476779)	+	L2b	LINE/L2	3004	3375	(0)	1874665
13	26.1	2.4	0.0	chr19	43619558	43619599	(14998017)	+	(CGG)n	Simple_repeat	1	43	(0)	1877255
445	24.7	23.8	1.7	chr19	43788874	43789108	(14828508)	+	L2a	LINE/L2	3121	3423	(3)	1877678
18	23.0	0.0	0.0	chr19	43789468	43789504	(14828112)	+	(AT)n	Simple_repeat	1	37	(0)	1877683
390	27.7	5.7	0.7	chr19	43951581	43951729	(14665887)	+	MIR	SINE/MIR	83	239	(23)	1877972
250	28.6	6.0	2.3	chr19	44072499	44072627	(14544989)	+	MIR	SINE/MIR	91	224	(38)	1878152
21	4.1	0.0	0.0	chr19	44212367	44212391	(14405225)	+	(T)n	Simple_repeat	1	25	(0)	1878385
2394	9.4	0.7	0.3	chr19	44259489	44259797	(14357819)	C	AluSg	SINE/Alu	(0)	310	1	1878455
447	29.1	6.5	1.2	chr19	44260179	44260338	(14357278)	+	MIR	SINE/MIR	64	232	(30)	1878456
191	32.2	9.4	0.0	chr19	44500820	44500934	(14116682)	C	MIRb	SINE/MIR	(12)	256	130	1878829
1947	17.1	0.3	0.7	chr19	44712847	44713155	(13904461)	+	AluJo	SINE/Alu	5	312	(0)	1879409
246	27.1	9.3	5.4	chr19	45078897	45079070	(13538546)	+	MIRc	SINE/MIR	2	174	(94)	1880412
1018	28.7	4.1	2.1	chr19	45296370	45296700	(13320916)	C	MLT1J	LTR/ERVL-MaLR	(174)	338	1	1880927
2188	12.6	0.3	0.0	chr19	45296768	45297068	(13320548)	+	AluSx	SINE/Alu	1	302	(10)	1880933
615	22.7	3.9	3.9	chr19	45326209	45326387	(13291229)	+	MLT1N2	LTR/ERVL-MaLR	17	195	(367)	1881010
813	24.2	13.1	1.2	chr19	45391471	45391813	(13225803)	+	MLT1J	LTR/ERVL-MaLR	82	471	(41)	1881183
193	27.3	0.0	0.0	chr19	45405400	45405443	(13212173)	+	MIR3	SINE/MIR	111	154	(54)	1881219
803	0.0	0.0	0.0	chr19	45478602	45478687	(13138929)	C	tRNA-SeC(e)-TGA	tRNA	(3)	86	1	1881421
219	32.5	5.0	2.6	chr19	45496196	45496312	(13121304)	C	MIR3	SINE/MIR	(62)	146	27	1881466
36	0.0	0.0	0.0	chr19	45496963	45496995	(13120621)	+	(GCC)n	Simple_repeat	1	33	(0)	1881467
12	13.3	2.7	5.3	chr19	45498864	45498900	(13118716)	+	(GCGAGC)n	Simple_repeat	1	38	(0)	1881472
70	0.0	0.0	0.0	chr19	45770205	45770266	(12847350)	+	(CAG)n	Simple_repeat	1	62	(0)	1882221
12	16.3	7.0	2.2	chr19	45770291	45770333	(12847283)	+	(GCCCCG)n	Simple_repeat	1	46	(0)	1882222
18	26.5	1.4	2.8	chr19	45792549	45792619	(12824997)	+	(CGGAGG)n	Simple_repeat	1	72	(0)	1882258
663	26.7	4.9	4.9	chr19	45819462	45819725	(12797891)	+	L2b	LINE/L2	3085	3348	(27)	1882325
306	23.3	6.5	6.5	chr19	45820140	45820277	(12797339)	+	Charlie4z	DNA/hAT-Charlie	1	138	(29)	1882326
16	0.0	0.0	0.0	chr19	45863114	45863133	(12754483)	+	(CCG)n	Simple_repeat	1	20	(0)	1882442
25	27.4	0.0	1.3	chr19	45886057	45886132	(12731484)	+	(GCC)n	Simple_repeat	1	76	(0)	1882486
591	24.4	5.2	2.4	chr19	45927752	45927919	(12689697)	+	LTR67B	LTR/ERVL	2	174	(446)	1882602
246	28.9	4.0	2.0	chr19	45928008	45928106	(12689510)	+	LTR67B	LTR/ERVL	412	512	(108)	1882602
276	27.6	7.0	4.6	chr19	46413580	46413731	(12203885)	C	LTR104_Mam	LTR/Gypsy	(698)	811	656	1883596
419	29.0	0.0	7.1	chr19	46546647	46546787	(12070829)	C	MLT1J2	LTR/ERVL-MaLR	(289)	159	29	1883967
1590	15.9	8.2	0.0	chr19	46546801	46547070	(12070546)	C	AluJb	SINE/Alu	(10)	302	9	1883969
13	22.6	1.7	6.7	chr19	46745903	46745963	(11871653)	+	(TCCC)n	Simple_repeat	1	57	(0)	1884423
12	24.8	0.0	0.0	chr19	46746024	46746057	(11871559)	+	(CCCG)n	Simple_repeat	1	34	(0)	1884424
13	5.3	0.0	0.0	chr19	46746071	46746090	(11871526)	+	(GGC)n	Simple_repeat	1	20	(0)	1884425
571	18.2	7.2	4.1	chr19	46851218	46851338	(11766278)	C	AluJr4	SINE/Alu	(179)	133	9	1884739
682	28.5	6.5	8.2	chr19	46898813	46899106	(11718510)	C	LTR33A	LTR/ERVL	(190)	330	41	1884861
198	34.2	1.4	0.0	chr19	46899225	46899297	(11718319)	C	L2	LINE/L2	(346)	3073	3000	1884863
64	2.4	6.9	0.0	chr19	47048969	47049055	(11568561)	+	(TCTT)n	Simple_repeat	1	93	(0)	1885144
12	22.4	0.0	6.4	chr19	47130933	47130979	(11486637)	+	GA-rich	Low_complexity	1	47	(0)	1885344
236	31.0	6.5	6.0	chr19	47227046	47227213	(11390403)	C	MIR1_Amn	SINE/MIR	(51)	179	11	1885598
2057	10.0	5.5	0.0	chr19	47269349	47269637	(11347979)	C	AluSx1	SINE/Alu	(6)	306	1	1885710
549	26.9	17.1	1.9	chr19	47269638	47269846	(11347770)	C	L2a	LINE/L2	(256)	3170	2920	1885709
798	26.6	8.4	1.4	chr19	47364066	47364351	(11253265)	C	MLT1J2	LTR/ERVL-MaLR	(140)	308	1	1885986
1941	14.3	1.4	1.4	chr19	47364457	47364750	(11252866)	+	AluJr	SINE/Alu	2	295	(17)	1885987
1171	26.7	6.8	13.2	chr19	47438912	47439245	(11178371)	+	MLT1J2	LTR/ERVL-MaLR	4	359	(89)	1886162
1722	9.4	2.5	1.3	chr19	48111076	48111309	(10506307)	+	AluSx	SINE/Alu	1	237	(75)	1887971
375	22.0	2.5	8.8	chr19	48111394	48111572	(10506044)	+	MLT1J1	LTR/ERVL-MaLR	65	206	(238)	1887972
2307	8.9	0.3	1.6	chr19	48111616	48111918	(10505698)	C	AluSx1	SINE/Alu	(12)	300	2	1887973
2223	10.9	0.0	0.3	chr19	48344714	48345007	(10272609)	C	AluSq2	SINE/Alu	(20)	293	1	1888519
277	23.5	1.2	15.8	chr19	48345008	48345053	(10272563)	+	MER91B	DNA/hAT-Tip100	145	178	(12)	1888518
201	30.9	12.7	0.0	chr19	48363008	48363126	(10254490)	C	MIR1_Amn	SINE/MIR	(108)	160	26	1888574
11	16.4	5.9	0.0	chr19	48397209	48397242	(10220374)	+	G-rich	Low_complexity	1	36	(0)	1888658
2289	8.6	0.3	5.2	chr19	48400784	48401110	(10216506)	+	AluSx	SINE/Alu	1	311	(1)	1888662
1808	26.7	5.4	12.6	chr19	48403533	48403709	(10213907)	C	L2a	LINE/L2	(1096)	2323	2139	1888663
486	29.3	3.1	3.1	chr19	48403860	48403957	(10213659)	C	MLT1J1	LTR/ERVL-MaLR	(0)	444	350	1888669
2420	9.6	0.0	0.0	chr19	48403958	48404258	(10213358)	+	AluSp	SINE/Alu	1	301	(12)	1888670
2357	10.2	0.0	0.6	chr19	48608433	48608745	(10008871)	C	AluSx3	SINE/Alu	(0)	311	1	1889212
632	22.4	5.3	17.1	chr19	48608746	48608810	(10008806)	+	MER5A	DNA/hAT-Charlie	128	189	(0)	1889210
532	24.3	3.2	9.9	chr19	48608819	48609019	(10008597)	+	MER20	DNA/hAT-Charlie	1	187	(32)	1889213
614	26.5	1.7	3.1	chr19	48609041	48609219	(10008397)	C	MIR	SINE/MIR	(32)	176	1	1889214
391	33.1	5.3	0.0	chr19	48618825	48618966	(9998650)	+	MIR	SINE/MIR	2	151	(111)	1889229
934	9.0	0.8	0.0	chr19	48644773	48644894	(9972722)	C	AluSx	SINE/Alu	(189)	123	1	1889269
12	4.3	8.3	0.0	chr19	48721317	48721340	(9896276)	+	(GGGT)n	Simple_repeat	1	26	(0)	1889463
38	0.0	2.3	2.3	chr19	48759125	48759167	(9858449)	+	(AAAT)n	Simple_repeat	1	44	(0)	1889526
741	10.2	0.0	0.7	chr19	48837586	48837784	(9779832)	+	MSR1	Satellite	1	197	(0)	1889740
2331	10.5	0.0	1.0	chr19	48838482	48838812	(9778804)	+	AluSx1	SINE/Alu	1	312	(0)	1889743
2095	12.0	0.0	0.0	chr19	48852652	48852943	(9764673)	+	AluSz	SINE/Alu	2	293	(19)	1889785
2325	8.5	0.0	2.0	chr19	48858340	48858644	(9758972)	+	AluSx1	SINE/Alu	1	299	(13)	1889803
2156	10.5	0.0	1.4	chr19	48881682	48881817	(9735799)	C	AluSx	SINE/Alu	(176)	136	1	1889853
1940	11.9	0.0	0.0	chr19	48884935	48885195	(9732421)	C	AluSz	SINE/Alu	(46)	266	6	1889862
1138	16.2	2.1	0.0	chr19	48899753	48899937	(9717679)	+	AluJb	SINE/Alu	120	308	(4)	1889898
578	12.7	0.0	0.0	chr19	48944608	48944686	(9672930)	+	AluSz6	SINE/Alu	215	293	(19)	1890034
2503	9.0	0.3	0.0	chr19	48945037	48945347	(9672269)	+	AluSp	SINE/Alu	1	312	(1)	1890035
264	22.2	7.5	14.7	chr19	48983964	48984004	(9633612)	+	Tigger5	DNA/TcMar-Tigger	3	36	(2370)	1890119
2169	10.9	0.0	2.6	chr19	48984005	48984306	(9633310)	C	AluSq2	SINE/Alu	(19)	294	1	1890120
329	8.5	4.1	0.0	chr19	48986211	48986257	(9631359)	C	FLAM_A	SINE/Alu	(48)	94	46	1890126
2021	11.4	4.8	2.9	chr19	48986491	48986796	(9630820)	C	AluSx1	SINE/Alu	(0)	312	1	1890127
200	35.9	4.5	6.7	chr19	48997999	48998338	(9619278)	C	L2c	LINE/L2	(74)	3301	2973	1890151
2243	9.1	0.3	4.4	chr19	48998415	48998733	(9618883)	+	AluSz	SINE/Alu	3	308	(4)	1890152
16	8.5	0.0	0.0	chr19	49115007	49115031	(9502585)	+	(TCC)n	Simple_repeat	1	25	(0)	1890413
301	23.9	8.0	4.2	chr19	49331532	49331627	(9285989)	C	MLT1J2	LTR/ERVL-MaLR	(0)	444	345	1890890
677	29.4	3.6	0.5	chr19	49331653	49331864	(9285752)	C	MLT1J2	LTR/ERVL-MaLR	(211)	237	19	1890890
307	10.5	0.0	0.0	chr19	49331863	49331900	(9285716)	+	AluJb	SINE/Alu	214	251	(61)	1890891
1247	24.9	7.2	6.3	chr19	49331979	49332275	(9285341)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	155	1890892
1457	27.2	8.2	0.0	chr19	49347878	49348278	(9269338)	+	MLT1J2	LTR/ERVL-MaLR	1	437	(11)	1890916
11	19.6	0.0	8.3	chr19	49348787	49348834	(9268782)	+	G-rich	Low_complexity	1	48	(0)	1890919
727	25.6	5.2	6.3	chr19	49348918	49349127	(9268489)	+	MLT1J	LTR/ERVL-MaLR	84	265	(247)	1890920
2449	14.1	4.9	3.3	chr19	49349128	49349182	(9268434)	+	MSTB	LTR/ERVL-MaLR	1	55	(371)	1890921
2383	8.8	0.0	0.0	chr19	49349183	49349478	(9268138)	+	AluSc8	SINE/Alu	2	297	(14)	1890922
13	19.8	0.0	2.7	chr19	49361581	49361617	(9255999)	+	(CTCCC)n	Simple_repeat	1	37	(0)	1890948
199	27.9	14.5	5.2	chr19	49393754	49393908	(9223708)	C	MIRb	SINE/MIR	(90)	178	7	1891024
124	15.4	5.9	2.1	chr19	49444058	49444364	(9173252)	+	(CTTC)n	Simple_repeat	1	325	(0)	1891102
2650	4.6	0.0	0.0	chr19	49451022	49451328	(9166288)	C	AluY	SINE/Alu	(4)	307	1	1891119
14	14.2	0.0	0.0	chr19	49451329	49451339	(9166277)	+	(CAACCC)n	Simple_repeat	3	13	(0)	1891120
362	24.4	9.8	0.0	chr19	49493245	49493400	(9124216)	+	L1M4	LINE/L1	5104	5282	(864)	1891212
2460	9.3	0.0	0.0	chr19	49493401	49493712	(9123904)	+	AluSx1	SINE/Alu	1	312	(0)	1891213
2355	5.9	0.3	0.3	chr19	49527312	49527597	(9090019)	C	AluSp	SINE/Alu	(27)	286	1	1891300
26	0.0	3.0	2.9	chr19	49527619	49527651	(9089965)	+	(TTTTG)n	Simple_repeat	1	34	(0)	1891301
594	18.5	4.1	0.1	chr19	49641619	49641750	(8975866)	C	FLAM_C	SINE/Alu	(82)	220	5	1891597
17	10.7	0.0	0.0	chr19	49642185	49642214	(8975402)	+	(CCCCG)n	Simple_repeat	1	30	(0)	1891598
13	20.7	5.8	1.8	chr19	49642215	49642236	(8975380)	+	(CCCAGC)n	Simple_repeat	1	55	(0)	1891599
51	0.0	0.0	0.0	chr19	49659985	49660028	(8957588)	+	(AC)n	Simple_repeat	1	44	(0)	1891634
32	3.2	0.0	0.0	chr19	49660080	49660111	(8957505)	+	(AC)n	Simple_repeat	1	32	(0)	1891634
724	21.3	5.5	0.0	chr19	49749461	49749615	(8868001)	+	MLT1J	LTR/ERVL-MaLR	31	194	(318)	1891847
1279	23.3	4.0	0.4	chr19	49749644	49749909	(8867707)	C	AluJr4	SINE/Alu	(36)	276	1	1891848
286	20.4	1.8	4.2	chr19	49811729	49811825	(8805791)	C	MSR1	Satellite	(16)	94	1	1891996
12	14.1	3.0	2.9	chr19	49818246	49818278	(8799338)	+	(CGCGCG)n	Simple_repeat	1	34	(0)	1892011
12	19.3	0.0	5.1	chr19	49929309	49929347	(8688269)	+	(CCCGCTC)n	Simple_repeat	1	39	(0)	1892228
219	37.6	6.5	2.5	chr19	49987173	49987241	(8630375)	+	L2	LINE/L2	2428	2502	(917)	1892351
2643	4.0	0.0	0.0	chr19	49987701	49988001	(8629615)	C	AluY	SINE/Alu	(10)	301	1	1892353
1431	29.8	4.2	1.3	chr19	49997729	49998190	(8619426)	+	MLT1J	LTR/ERVL-MaLR	6	481	(31)	1892374
455	23.3	6.8	0.0	chr19	50158494	50158643	(8458973)	C	ORSL-2a	DNA/hAT-Tip100	(80)	262	102	1892806
640	25.2	15.4	1.2	chr19	50158690	50159016	(8458600)	+	MLT1J1	LTR/ERVL-MaLR	38	434	(14)	1892807
20	17.3	4.3	0.0	chr19	50328819	50328865	(8288751)	+	(GCC)n	Simple_repeat	1	49	(0)	1893279
12	23.3	0.0	0.0	chr19	50639747	50639781	(7977835)	+	G-rich	Low_complexity	1	35	(0)	1893983
929	24.3	4.8	10.4	chr19	50676718	50677127	(7940489)	+	MLT1J	LTR/ERVL-MaLR	24	413	(99)	1894078
1771	14.3	3.5	4.5	chr19	50759625	50759938	(7857678)	C	AluJb	SINE/Alu	(1)	311	1	1894268
819	28.8	0.7	6.6	chr19	50759939	50760176	(7857440)	+	MLT1J	LTR/ERVL-MaLR	46	269	(243)	1894267
1389	13.5	5.3	12.0	chr19	50772169	50772494	(7845122)	C	AluJb	SINE/Alu	(9)	303	1	1894299
795	27.8	1.3	3.8	chr19	50772495	50772730	(7844886)	+	MLT1J	LTR/ERVL-MaLR	39	268	(244)	1894300
1492	27.4	5.9	0.6	chr19	50814666	50815150	(7802466)	C	LTR33A	LTR/ERVL	(6)	514	3	1894395
726	2.5	0.0	6.7	chr19	50975045	50975743	(7641873)	C	MSR1	Satellite	(0)	652	1	1894737
649	14.3	17.8	0.9	chr19	51005288	51005399	(7612217)	+	AluJr	SINE/Alu	1	135	(177)	1894798
267	26.5	2.0	9.3	chr19	51005524	51005631	(7611985)	+	L3	LINE/CR1	3990	4089	(10)	1894799
434	21.7	15.9	1.2	chr19	51460566	51460762	(7156854)	+	MLT2F	LTR/ERVL	1	234	(429)	1895672
290	26.2	3.6	0.0	chr19	51480732	51480811	(7136805)	C	MLT1E1	LTR/ERVL-MaLR	(569)	85	3	1895711
207	25.8	3.1	1.6	chr19	51607907	51607969	(7009647)	+	MIR3	SINE/MIR	86	149	(59)	1895888
217	29.5	5.2	5.8	chr19	51690676	51690812	(6926804)	+	MIR3	SINE/MIR	58	193	(15)	1896053
13	11.2	3.2	3.1	chr19	51719643	51719673	(6897943)	+	(GCC)n	Simple_repeat	1	32	(0)	1896112
1495	27.8	1.2	1.9	chr19	51905172	51905603	(6712013)	C	MER57F	LTR/ERV1	(6)	429	1	1896458
6334	12.1	1.6	1.2	chr19	52558697	52559661	(6057955)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	1897707
17	27.6	3.3	4.3	chr19	53582020	53582109	(5035507)	+	GA-rich	Low_complexity	1	93	(0)	1899627
214	32.0	1.0	4.8	chr19	53977759	53977863	(4639753)	C	MIR3	SINE/MIR	(23)	185	85	1900727
12	11.2	6.9	0.0	chr19	53977918	53977946	(4639670)	+	(TTCTT)n	Simple_repeat	1	31	(0)	1900728
650	12.5	1.6	0.5	chr19	54095477	54095856	(4521760)	C	MSR1	Satellite	(8)	384	1	1901066
238	25.5	1.0	0.5	chr19	54096199	54096810	(4520806)	+	(CTCT)n	Simple_repeat	1	618	(0)	1901067
181	18.2	2.9	0.0	chr19	54173557	54173589	(4444027)	+	MIR1_Amn	SINE/MIR	119	152	(78)	1901230
295	35.2	9.4	1.8	chr19	54178292	54178508	(4439108)	C	MIR	SINE/MIR	(0)	262	28	1901247
222	31.5	2.1	4.5	chr19	54178543	54178659	(4438957)	C	MIR3	SINE/MIR	(120)	148	31	1901248
26	27.8	0.0	6.0	chr19	54465283	54465399	(4152217)	+	(GCGGCGG)n	Simple_repeat	1	117	(0)	1901794
2215	9.4	2.9	0.0	chr19	54465636	54465934	(4151682)	C	AluSx1	SINE/Alu	(4)	308	1	1901795
171	22.0	3.4	0.2	chr19	55066362	55066775	(3550841)	+	(TC)n	Simple_repeat	1	428	(0)	1902927
468	24.7	7.4	0.0	chr19	55118345	55118494	(3499122)	+	L2a	LINE/L2	3265	3426	(0)	1903035
15	20.0	3.6	3.5	chr19	55138022	55138076	(3479540)	+	(TCTTCC)n	Simple_repeat	1	57	(0)	1903080
204	28.1	0.9	11.6	chr19	55138178	55138280	(3479336)	+	MIR3	SINE/MIR	17	113	(95)	1903081
2437	7.7	0.0	0.0	chr19	55138281	55138577	(3479039)	C	AluSx1	SINE/Alu	(15)	297	1	1903082
22	23.9	3.5	0.0	chr19	55180268	55180324	(3437292)	+	(GT)n	Simple_repeat	1	59	(0)	1903171
358	27.7	8.3	2.5	chr19	55262011	55262169	(3355447)	C	MLT1N2	LTR/ERVL-MaLR	(387)	175	7	1903333
198	31.6	8.7	0.0	chr19	55504085	55504179	(3113437)	C	MIRb	SINE/MIR	(95)	173	70	1903859
12	19.3	0.0	5.1	chr19	55600208	55600246	(3017370)	+	(GCGG)n	Simple_repeat	1	39	(0)	1904120
19	11.3	2.5	2.4	chr19	55600272	55600311	(3017305)	+	(GCC)n	Simple_repeat	1	41	(0)	1904121
536	19.0	11.4	8.7	chr19	55639911	55640049	(2977567)	C	MER3	DNA/hAT-Charlie	(56)	153	2	1904215
13	22.0	2.7	0.0	chr19	55640125	55640161	(2977455)	+	(GCT)n	Simple_repeat	1	38	(0)	1904217
195	32.9	1.4	0.0	chr19	55640488	55640557	(2977059)	+	MIRc	SINE/MIR	112	182	(86)	1904218
21	26.2	1.3	2.6	chr19	55654889	55654964	(2962652)	+	G-rich	Low_complexity	1	77	(0)	1904236
13	23.2	0.0	2.4	chr19	55655318	55655359	(2962257)	+	G-rich	Low_complexity	1	42	(0)	1904237
14	5.0	0.0	0.0	chr19	56140757	56140777	(2476839)	+	(CTC)n	Simple_repeat	1	21	(0)	1905199
16	20.7	3.9	1.9	chr19	56404356	56404407	(2213209)	+	(CGGCCC)n	Simple_repeat	1	54	(0)	1905746
82	15.3	1.6	4.2	chr19	56538768	56538955	(2078661)	+	G-rich	Low_complexity	1	191	(0)	1905962
11	27.4	1.6	4.8	chr19	56567606	56567667	(2049949)	+	(GCGTGC)n	Simple_repeat	1	63	(0)	1906004
19	15.9	2.4	0.0	chr19	56595157	56595198	(2022418)	+	(GCTCG)n	Simple_repeat	1	43	(0)	1906049
283	27.1	2.0	1.0	chr19	56637833	56637929	(1979687)	C	MamRep605	LTR?	(650)	199	102	1906137
26	0.0	0.0	0.0	chr19	57363364	57363388	(1254228)	+	(TGCG)n	Simple_repeat	1	25	(0)	1907684
44	3.1	2.7	5.3	chr19	57487527	57487600	(1130016)	+	(ATCTCC)n	Simple_repeat	1	76	(0)	1907880
187	14.4	7.0	0.4	chr19	57499312	57499737	(1117879)	+	(CTCCAT)n	Simple_repeat	1	456	(0)	1907898
989	23.4	6.3	1.8	chr19	57560033	57560365	(1057251)	+	MER88	LTR/ERVL	1	349	(115)	1907987
2392	8.2	0.0	0.3	chr19	57727861	57728164	(889452)	C	AluSg	SINE/Alu	(6)	304	2	1908229
910	15.5	4.5	0.0	chr19	57815132	57815279	(802337)	+	FRAM	SINE/Alu	6	160	(16)	1908374
2060	6.1	3.6	3.2	chr19	57819208	57819513	(798103)	C	AluY	SINE/Alu	(0)	311	1	1908382
1372	17.8	0.0	9.5	chr19	57829956	57830059	(787557)	C	AluJr	SINE/Alu	(199)	113	11	1908399
188	26.7	0.0	0.0	chr19	57849636	57849680	(767936)	C	L2c	LINE/L2	(312)	3075	3031	1908433
1529	16.7	0.0	7.5	chr19	57889272	57889577	(728039)	+	AluJr	SINE/Alu	11	293	(19)	1908503
2441	6.8	0.0	3.4	chr19	57916811	57917132	(700484)	+	AluYm1	SINE/Alu	1	311	(0)	1908540
194	34.8	6.1	0.0	chr19	58003132	58003223	(614393)	C	MIR	SINE/MIR	(45)	217	120	1908686
477	13.1	0.0	2.3	chr19	58009991	58010086	(607530)	+	FLAM_C	SINE/Alu	1	72	(61)	1908697
14	26.6	3.7	0.0	chr19	58059315	58059368	(558248)	+	(GCCAG)n	Simple_repeat	1	56	(0)	1908790
58	1.8	0.0	0.0	chr19	58229267	58229323	(388293)	+	(GGGTGGGACT)n	Simple_repeat	1	57	(0)	1909145
17	18.7	6.2	6.8	chr19	58305442	58305538	(312078)	+	(AGTGGTG)n	Simple_repeat	1	103	(0)	1909308
2296	19.6	0.7	0.5	chr19	58305671	58306101	(311515)	+	LTR3	LTR/ERVK	1	432	(0)	1909309
184	34.6	1.3	3.7	chr19	58398462	58398542	(219074)	+	L2c	LINE/L2	3288	3366	(21)	1909465
13	21.7	4.7	6.7	chr19	58408437	58408521	(209095)	+	(CAACGCC)n	Simple_repeat	1	89	(0)	1909481
2337	7.8	1.0	0.0	chr19	58543417	58543711	(73905)	C	AluSq2	SINE/Alu	(15)	298	1	1909716
564	25.6	0.7	0.0	chr19	58543719	58543855	(73761)	C	AluJb	SINE/Alu	(39)	273	136	1909717
11	24.3	5.5	1.7	chr19	58573164	58573218	(44398)	+	(CCTTCC)n	Simple_repeat	1	58	(0)	1909747
2769	0.6	0.0	0.0	chr19	58574896	58575206	(42410)	+	AluYa5	SINE/Alu	1	311	(0)	1909752
250	11.1	2.2	0.0	chr2	2613547	2613591	(239579938)	C	L1M6	LINE/L1	(5901)	595	550	1913479
194	27.3	0.0	0.0	chr2	2613680	2613723	(239579806)	+	LFSINE_Vert	SINE/tRNA	358	401	(58)	1913480
1915	15.0	12.6	3.9	chr2	3349801	3349841	(238843688)	C	MSTA	LTR/ERVL-MaLR	(0)	428	396	1914347
2378	9.2	1.9	0.0	chr2	3349842	3350144	(238843385)	+	AluSx	SINE/Alu	1	309	(3)	1914348
1809	11.1	2.7	2.7	chr2	3574677	3574974	(238618555)	C	AluJb	SINE/Alu	(14)	298	1	1914685
522	28.4	2.1	0.5	chr2	3652018	3652201	(238541328)	C	MLT1N2	LTR/ERVL-MaLR	(14)	548	362	1914780
227	18.6	2.3	0.0	chr2	3652346	3652388	(238541141)	+	MER91B	DNA/hAT-Tip100	20	63	(127)	1914781
299	20.9	6.5	0.0	chr2	9275829	9275914	(232917615)	C	MER33	DNA/hAT-Charlie	(63)	261	170	1922688
266	20.6	4.5	1.6	chr2	9275912	9275975	(232917554)	C	MER33	DNA/hAT-Charlie	(259)	65	5	1922688
208	30.0	11.5	4.8	chr2	9276093	9276197	(232917332)	+	L2a	LINE/L2	3309	3421	(5)	1922689
12	7.8	7.4	0.0	chr2	9474893	9474919	(232718610)	+	(CCGCG)n	Simple_repeat	1	29	(0)	1923012
1329	28.1	5.4	0.2	chr2	9709405	9709842	(232483687)	+	LTR16B2	LTR/ERVL	1	462	(0)	1923492
448	26.2	9.6	3.8	chr2	9709865	9710282	(232483247)	+	MLT1J	LTR/ERVL-MaLR	10	512	(0)	1923493
21	14.1	3.3	4.8	chr2	10043495	10043554	(232149975)	+	(CCGCC)n	Simple_repeat	1	62	(0)	1924068
11	11.7	7.3	4.5	chr2	10043901	10043941	(232149588)	+	G-rich	Low_complexity	1	44	(0)	1924069
979	29.1	3.4	6.5	chr2	10412407	10412660	(231780869)	C	MLT1J2	LTR/ERVL-MaLR	(179)	269	31	1924724
17	18.1	0.0	7.0	chr2	10448011	10448067	(231745462)	+	(CCGCGGC)n	Simple_repeat	1	57	(0)	1924772
21	21.0	2.8	4.1	chr2	10448241	10448311	(231745218)	+	(CGG)n	Simple_repeat	1	73	(0)	1924773
276	24.4	8.8	1.7	chr2	16675904	16676052	(225517477)	+	MLT1J1	LTR/ERVL-MaLR	25	182	(229)	1934893
13	16.9	0.0	8.5	chr2	17538994	17539040	(224654489)	+	(CCGCGCT)n	Simple_repeat	1	47	(0)	1936102
13	16.5	8.2	1.9	chr2	17753811	17753859	(224439670)	+	(GCGCCT)n	Simple_repeat	1	53	(0)	1936458
5336	12.1	13.0	9.7	chr2	20105982	20107080	(222086449)	C	LTR12D	LTR/ERV1	(113)	1141	1	1939766
2337	9.8	0.0	0.3	chr2	20107173	20107478	(222086051)	+	AluSc8	SINE/Alu	1	305	(6)	1939767
920	27.0	8.3	3.5	chr2	23375259	23375634	(218817895)	C	MLT1J1	LTR/ERVL-MaLR	(2)	442	47	1944299
246	14.1	14.7	1.5	chr2	23375651	23375715	(218817814)	C	MLT1J1	LTR/ERVL-MaLR	(350)	94	20	1944299
233	34.7	0.0	1.3	chr2	23375735	23375810	(218817719)	+	MER5A	DNA/hAT-Charlie	115	189	(0)	1944300
59	8.1	0.0	0.0	chr2	24084341	24084420	(218109109)	+	(CAGGG)n	Simple_repeat	1	80	(0)	1945480
444	32.4	2.0	0.0	chr2	24471529	24471673	(217721856)	C	MIRb	SINE/MIR	(107)	161	14	1946219
282	22.4	17.6	0.0	chr2	24471671	24471768	(217721761)	C	L2a	LINE/L2	(2)	3424	3306	1946220
791	20.4	19.1	1.8	chr2	24471770	24471998	(217721531)	+	MLT1J1	LTR/ERVL-MaLR	2	279	(165)	1946221
2376	8.1	0.3	0.0	chr2	24472084	24472381	(217721148)	C	AluSp	SINE/Alu	(14)	299	1	1946222
13	22.7	0.0	0.0	chr2	25342311	25342346	(216851183)	+	G-rich	Low_complexity	1	36	(0)	1947760
504	26.3	4.3	1.9	chr2	25342754	25342912	(216850617)	+	L3	LINE/CR1	3929	4091	(8)	1947761
12	22.3	0.0	7.4	chr2	25822128	25822181	(216371348)	+	A-rich	Low_complexity	1	54	(0)	1948632
19	19.9	3.0	5.1	chr2	25982575	25982647	(216210882)	+	G-rich	Low_complexity	1	71	(0)	1949041
531	31.4	4.0	1.6	chr2	26073482	26073675	(216119854)	C	LTR33B	LTR/ERVL	(294)	209	11	1949282
12	18.9	7.1	0.0	chr2	26184741	26184782	(216008747)	+	(CGCTGG)n	Simple_repeat	1	45	(0)	1949502
12	0.0	0.0	5.0	chr2	26847947	26847966	(215345563)	+	(GGC)n	Simple_repeat	1	20	(0)	1950752
18	11.6	0.0	4.9	chr2	27032889	27032929	(215160600)	+	G-rich	Low_complexity	1	41	(0)	1951084
16	19.6	0.0	4.4	chr2	27033067	27033111	(215160418)	+	(CGG)n	Simple_repeat	1	45	(0)	1951085
226	27.7	5.7	3.5	chr2	27081622	27081705	(215111824)	C	MIRb	SINE/MIR	(71)	197	112	1951147
465	32.6	1.7	4.4	chr2	27081706	27081888	(215111641)	+	MIRb	SINE/MIR	4	181	(87)	1951148
14	9.3	0.0	0.0	chr2	27380692	27380714	(214812815)	+	(GCC)n	Simple_repeat	1	23	(0)	1951698
14	31.9	0.0	0.0	chr2	27442515	27442568	(214750961)	+	(CCCGC)n	Simple_repeat	1	54	(0)	1951833
242	30.7	13.6	2.8	chr2	27772099	27772242	(214421287)	C	MIR3	SINE/MIR	(32)	176	15	1952467
235	29.5	7.7	1.4	chr2	28489312	28489428	(213704101)	+	MIRc	SINE/MIR	60	184	(84)	1953650
201	20.6	5.5	9.3	chr2	28489438	28489512	(213704017)	+	MIRc	SINE/MIR	8	79	(189)	1953651
248	28.2	0.0	4.0	chr2	28489504	28489577	(213703952)	+	MIR3	SINE/MIR	104	174	(34)	1953652
12	23.0	0.0	4.5	chr2	28751965	28752008	(213441521)	+	G-rich	Low_complexity	1	44	(0)	1954159
14	14.2	3.2	0.0	chr2	28752047	28752077	(213441452)	+	(CGC)n	Simple_repeat	1	32	(0)	1954160
332	32.0	6.2	5.1	chr2	28811152	28811309	(213382220)	+	L1M4b	LINE/L1	458	617	(6250)	1954259
15	11.2	0.0	3.2	chr2	31138684	31138714	(211054815)	+	(GGGGC)n	Simple_repeat	1	31	(0)	1958027
483	18.6	1.0	1.0	chr2	31272159	31272256	(210921273)	+	LTR67B	LTR/ERVL	73	170	(450)	1958269
2064	14.4	3.0	3.8	chr2	31729351	31729717	(210463812)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1958815
8820	19.7	5.5	2.8	chr2	31729718	31731502	(210462027)	+	L1MA4	LINE/L1	1765	3620	(3945)	1958813
12	21.7	0.0	0.0	chr2	32039562	32039593	(210153936)	+	(CCCCGA)n	Simple_repeat	1	32	(0)	1959375
2503	5.8	0.3	0.0	chr2	32165212	32165503	(210028026)	C	AluSz	SINE/Alu	(18)	294	2	1959677
255	33.8	9.4	1.9	chr2	32165504	32165604	(210027925)	+	MIRb	SINE/MIR	107	221	(47)	1959676
22	23.4	1.6	1.6	chr2	32357248	32357347	(209836182)	+	(GGC)n	Simple_repeat	1	100	(0)	1960156
1039	28.2	5.5	2.8	chr2	36618480	36618869	(205574660)	+	MLT1J1	LTR/ERVL-MaLR	43	443	(1)	1966258
281	33.0	5.6	3.8	chr2	36753876	36754086	(205439443)	+	MIRc	SINE/MIR	32	246	(22)	1966475
13	17.8	5.3	0.0	chr2	37324772	37324809	(204868720)	+	(TCCC)n	Simple_repeat	1	40	(0)	1967538
197	26.8	7.5	1.1	chr2	37526234	37526320	(204667209)	+	L2a	LINE/L2	3076	3168	(258)	1967861
546	31.4	7.7	4.9	chr2	37526409	37526837	(204666692)	+	MLT1J	LTR/ERVL-MaLR	42	483	(29)	1967862
15	0.0	0.0	0.0	chr2	38778058	38778076	(203415453)	+	(ATT)n	Simple_repeat	1	19	(0)	1969948
13	5.2	0.0	0.0	chr2	41837023	41837042	(200356487)	+	(TGG)n	Simple_repeat	1	20	(0)	1974493
487	30.4	1.9	1.2	chr2	41837187	41837346	(200356183)	+	MER5A	DNA/hAT-Charlie	1	161	(28)	1974494
1384	27.0	3.3	2.7	chr2	42074087	42074565	(200118964)	C	LTR33A	LTR/ERVL	(38)	482	1	1974901
332	27.9	7.6	5.4	chr2	42101709	42101837	(200091692)	+	MIRb	SINE/MIR	84	215	(53)	1974956
563	0.0	0.0	20.4	chr2	42810536	42810628	(199382901)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	1976362
892	19.9	4.6	0.9	chr2	42944604	42944831	(199248698)	C	Charlie5	DNA/hAT-Charlie	(0)	2624	2388	1976589
502	26.9	13.5	0.0	chr2	42944858	42945024	(199248505)	C	LTR33B	LTR/ERVL	(310)	193	1	1976590
571	26.1	19.1	3.9	chr2	43142864	43143298	(199050231)	C	MLT1N2	LTR/ERVL-MaLR	(7)	555	39	1976965
2297	12.5	0.0	0.0	chr2	43143312	43143623	(199049906)	+	AluSx	SINE/Alu	1	312	(0)	1976966
13	23.0	0.0	2.6	chr2	43225378	43225415	(198968114)	+	(CTG)n	Simple_repeat	1	38	(0)	1977141
13	14.4	3.0	2.9	chr2	43225523	43225555	(198967974)	+	(CCG)n	Simple_repeat	1	34	(0)	1977142
366	20.0	4.8	0.0	chr2	44044159	44044238	(198149291)	+	MARNA	DNA/TcMar-Mariner	279	362	(224)	1978457
999	25.1	11.3	1.0	chr2	44792860	44793485	(197400044)	+	L1MEj	LINE/L1	804	1776	(689)	1979755
303	27.9	2.5	0.0	chr2	44793508	44793586	(197399943)	+	HAL1	LINE/L1	1821	1901	(606)	1979756
19	27.0	0.0	0.0	chr2	44793646	44793658	(197399871)	+	GA-rich	Low_complexity	1	13	(0)	1979757
935	15.2	0.0	0.0	chr2	44793659	44793790	(197399739)	+	FLAM_A	SINE/Alu	1	132	(10)	1979758
12	11.1	0.0	8.6	chr2	45008417	45008451	(197185078)	+	(GGCTG)n	Simple_repeat	1	35	(0)	1980085
306	22.2	2.1	5.5	chr2	47369285	47369484	(194824045)	+	LTR41B	LTR/ERVL	252	444	(314)	1983926
346	30.1	2.4	3.1	chr2	47512665	47512791	(194680738)	+	LTR33A	LTR/ERVL	45	170	(350)	1984239
968	24.5	5.4	0.0	chr2	48046872	48047083	(194146446)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	1985289
3336	21.3	8.2	3.0	chr2	48047084	48047211	(194146318)	+	ERVL-E-int	LTR/ERVL	5540	5667	(0)	1985287
2363	20.0	14.9	0.9	chr2	48047216	48047467	(194146062)	+	MLT2F	LTR/ERVL	5	316	(347)	1985287
54	3.7	0.0	0.0	chr2	48047468	48047522	(194146007)	+	(GT)n	Simple_repeat	1	55	(0)	1985290
265	33.3	0.0	0.9	chr2	48124647	48124758	(194068771)	C	MARNA	DNA/TcMar-Mariner	(155)	431	321	1985417
691	30.1	7.7	3.9	chr2	48124770	48125343	(194068186)	+	MLT2F	LTR/ERVL	12	650	(13)	1985418
13	8.9	4.5	8.7	chr2	51003726	51003769	(191189760)	+	GA-rich	Low_complexity	1	46	(0)	1989529
15	8.5	7.3	4.5	chr2	51004024	51004064	(191189465)	+	(TGT)n	Simple_repeat	1	44	(0)	1989530
32	2.7	2.6	0.0	chr2	53787126	53787163	(188406366)	+	(CCT)n	Simple_repeat	1	39	(0)	1993127
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
2133	11.7	3.4	0.0	chr2	55502452	55502732	(186690797)	C	AluSz	SINE/Alu	(21)	291	1	1996023
417	25.2	12.3	4.2	chr2	55502782	55503200	(186690329)	+	LTR33A_	LTR/ERVL	42	526	(5)	1996024
915	20.1	4.2	0.5	chr2	55618638	55618821	(186574708)	C	AluSc8	SINE/Alu	(9)	302	112	1996249
1157	26.9	8.2	1.5	chr2	58870615	58871003	(183322526)	C	MLT1J2	LTR/ERVL-MaLR	(17)	431	15	2000381
2448	9.7	0.3	0.0	chr2	60699335	60699645	(181493884)	+	AluSq	SINE/Alu	1	312	(1)	2002847
274	18.9	0.0	0.0	chr2	60699661	60699713	(181493816)	+	L1MC4a	LINE/L1	5881	5933	(1949)	2002844
1575	19.4	3.7	2.5	chr2	60699726	60700042	(181493487)	+	MLT2F	LTR/ERVL	1	321	(342)	2002848
17	13.7	0.0	0.0	chr2	61017811	61017842	(181175687)	+	(CCGGGA)n	Simple_repeat	1	32	(0)	2003500
16	22.5	4.5	2.9	chr2	61177289	61177354	(181016175)	+	(CCCCG)n	Simple_repeat	1	69	(0)	2003841
16	16.8	7.3	1.7	chr2	61177366	61177378	(181016151)	+	(GGCCGG)n	Simple_repeat	1	58	(0)	2003842
19	11.6	0.0	4.9	chr2	61177379	61177419	(181016110)	+	G-rich	Low_complexity	1	41	(0)	2003843
202	21.7	2.8	9.2	chr2	63059414	63059489	(179134040)	+	MIR	SINE/MIR	60	130	(132)	2007381
328	33.6	8.8	9.1	chr2	63059510	63059784	(179133745)	C	L1M4b	LINE/L1	(6375)	492	219	2007382
16	21.0	4.7	3.0	chr2	64019027	64019090	(178174439)	+	(CGGCGCC)n	Simple_repeat	1	67	(0)	2008681
21	29.5	2.6	0.0	chr2	64019220	64019297	(178174232)	+	(CCG)n	Simple_repeat	1	80	(0)	2008682
13	7.5	3.1	6.1	chr2	64019442	64019473	(178174056)	+	(GCCGG)n	Simple_repeat	1	33	(0)	2008683
1026	27.0	8.8	8.7	chr2	64345085	64345603	(177847926)	+	LTR33A	LTR/ERVL	1	520	(0)	2009212
19	16.6	4.3	0.0	chr2	64524370	64524416	(177669113)	+	(GCGGAG)n	Simple_repeat	1	49	(0)	2009513
1652	22.4	9.0	5.6	chr2	64787320	64787802	(177405727)	+	MLT1D	LTR/ERVL-MaLR	5	505	(0)	2009931
514	23.1	9.7	0.0	chr2	64787809	64787929	(177405600)	+	MLT1J	LTR/ERVL-MaLR	62	195	(317)	2009932
234	16.0	0.0	7.4	chr2	64787972	64788025	(177405504)	C	MLT1A	LTR/ERVL-MaLR	(17)	450	401	2009933
2974	11.4	3.3	0.2	chr2	64788035	64788474	(177405055)	C	L1PA16	LINE/L1	(4)	6162	5709	2009934
19	11.0	0.0	11.3	chr2	65130313	65130374	(177063155)	+	(CCCTC)n	Simple_repeat	1	62	(0)	2010633
445	19.5	3.0	2.7	chr2	65885479	65885608	(176307921)	C	LTR33A	LTR/ERVL	(645)	150	20	2012053
545	38.5	2.4	1.3	chr2	65885641	65886019	(176307510)	+	L2b	LINE/L2	2680	3062	(357)	2012043
589	24.9	2.9	3.4	chr2	66103657	66103831	(176089698)	+	LTR67B	LTR/ERVL	1	174	(446)	2012378
683	28.2	14.8	3.2	chr2	66103736	66104141	(176089388)	+	MLT1N2	LTR/ERVL-MaLR	102	562	(0)	2012379
915	24.7	13.7	16.9	chr2	69227520	69228051	(172965478)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	1	2016709
13	25.4	0.0	4.0	chr2	69386870	69386919	(172806610)	+	(CCCCGC)n	Simple_repeat	1	50	(0)	2016982
13	26.3	1.7	3.4	chr2	69387003	69387060	(172806469)	+	(CGGCCCC)n	Simple_repeat	1	59	(0)	2016983
16	18.9	2.9	7.0	chr2	69387229	69387297	(172806232)	+	(CCGCCGC)n	Simple_repeat	1	71	(0)	2016984
16	0.0	0.0	0.0	chr2	69644166	69644182	(172549347)	+	(C)n	Simple_repeat	1	17	(0)	2017442
37	28.6	1.1	5.4	chr2	70087465	70087646	(172105883)	+	(CCCGCC)n	Simple_repeat	1	184	(0)	2018348
1259	24.9	10.4	1.8	chr2	70477490	70477890	(171715639)	+	MLT1J2	LTR/ERVL-MaLR	1	440	(8)	2019163
2553	6.0	0.0	0.3	chr2	70747008	70747309	(171446220)	C	AluY	SINE/Alu	(10)	301	1	2019546
211	30.6	3.9	4.8	chr2	70747310	70747335	(171446194)	C	L2c	LINE/L2	(128)	3247	3225	2019545
486	27.0	18.7	3.2	chr2	72143578	72143985	(170049544)	C	MER115	DNA/hAT-Tip100	(161)	532	58	2021628
207	35.0	15.7	3.1	chr2	73072182	73072540	(169120989)	+	L2b	LINE/L2	2952	3364	(11)	2023054
18	25.4	1.8	0.0	chr2	73269059	73269125	(168924404)	+	G-rich	Low_complexity	1	68	(0)	2023421
16	15.4	4.4	2.1	chr2	73269389	73269433	(168924096)	+	G-rich	Low_complexity	1	47	(0)	2023422
18	9.1	5.3	2.5	chr2	73385805	73385842	(168807687)	+	(CTC)n	Simple_repeat	1	40	(0)	2023643
19	20.3	0.0	2.1	chr2	73385843	73385850	(168807679)	+	(CTCCCC)n	Simple_repeat	3	48	(0)	2023644
51	2.0	0.0	0.0	chr2	73385904	73385953	(168807576)	+	(GGA)n	Simple_repeat	1	50	(0)	2023645
12	31.9	0.0	0.0	chr2	73385981	73386030	(168807499)	+	(GAGGTG)n	Simple_repeat	1	50	(0)	2023646
1496	12.3	13.6	1.9	chr2	74483695	74483954	(167709575)	+	AluJb	SINE/Alu	1	295	(17)	2025477
14	23.9	0.0	6.6	chr2	74516017	74516077	(167677452)	+	(GCCGCT)n	Simple_repeat	1	61	(0)	2025517
12	8.8	4.2	0.0	chr2	74529647	74529670	(167663859)	+	(CGC)n	Simple_repeat	1	25	(0)	2025528
500	21.3	10.9	12.5	chr2	74647925	74648001	(167545528)	C	ORSL	DNA/hAT-Tip100	(201)	74	2	2025724
13	8.3	0.0	6.7	chr2	74648174	74648203	(167545326)	+	(GCCCA)n	Simple_repeat	1	30	(0)	2025726
615	28.1	9.3	5.7	chr2	75003931	75004300	(167189229)	+	MLT1J	LTR/ERVL-MaLR	80	464	(48)	2026323
338	24.5	5.8	5.8	chr2	85354969	85355072	(156838457)	+	MIR3	SINE/MIR	19	122	(86)	2040587
32	21.5	2.7	0.0	chr2	85418577	85418651	(156774878)	+	(CA)n	Simple_repeat	1	77	(0)	2040720
1332	23.2	11.7	7.5	chr2	85501051	85501540	(156691989)	C	LTR33A	LTR/ERVL	(1)	519	7	2040913
15	16.9	10.6	0.0	chr2	85539084	85539130	(156654399)	+	(GC)n	Simple_repeat	1	52	(0)	2040998
12	16.6	4.5	4.3	chr2	85539144	85539187	(156654342)	+	(CCGCG)n	Simple_repeat	1	46	(0)	2040999
12	7.4	10.3	0.0	chr2	85611846	85611874	(156581655)	+	(GGC)n	Simple_repeat	1	32	(0)	2041125
1119	23.2	11.9	4.3	chr2	85864722	85865140	(156328389)	+	MLT1J	LTR/ERVL-MaLR	1	455	(57)	2041643
390	28.1	6.0	12.3	chr2	86003844	86003953	(156189576)	+	MamGypLTR3a	LTR/Gypsy	777	980	(1)	2041908
864	26.8	4.7	1.9	chr2	86004074	86004343	(156189186)	+	MLT1J	LTR/ERVL-MaLR	36	313	(199)	2041910
15	23.7	0.0	7.3	chr2	86807811	86807878	(155385651)	+	G-rich	Low_complexity	1	68	(0)	2043240
284	26.3	8.3	2.2	chr2	86808329	86808464	(155385065)	C	MIR3	SINE/MIR	(8)	200	56	2043241
750	28.1	9.4	6.8	chr2	87275412	87275824	(154917705)	+	MLT1J	LTR/ERVL-MaLR	86	510	(2)	2044007
533	16.3	2.3	12.2	chr2	88015824	88015970	(154177559)	+	AluJb	SINE/Alu	2	133	(179)	2045130
249	26.2	15.1	3.6	chr2	88015989	88016099	(154177430)	+	AluJb	SINE/Alu	118	243	(59)	2045130
421	22.6	8.2	1.0	chr2	88016105	88016206	(154177323)	C	AluJo	SINE/Alu	(195)	117	8	2045131
923	20.9	0.0	1.6	chr2	88016358	88016547	(154176982)	C	U2	snRNA	(1)	187	1	2045132
2239	10.7	1.0	1.3	chr2	88467785	88467957	(153725572)	+	AluSx1	SINE/Alu	134	308	(4)	2046082
407	23.8	10.2	4.5	chr2	88468012	88468187	(153725342)	C	MLT1J	LTR/ERVL-MaLR	(325)	187	1	2046084
2279	9.8	0.3	1.9	chr2	88468364	88468679	(153724850)	+	AluSx	SINE/Alu	1	311	(1)	2046085
760	24.4	3.9	0.6	chr2	88545235	88545442	(153648087)	+	MLT1J	LTR/ERVL-MaLR	12	196	(316)	2046256
293	25.0	2.2	0.0	chr2	95402464	95402551	(146790978)	+	MER96	DNA/hAT-Tip100	1	90	(85)	2050643
186	30.4	1.8	0.0	chr2	96152049	96152104	(146041425)	+	MIRc	SINE/MIR	45	101	(167)	2051633
551	33.5	10.6	3.0	chr2	96152139	96152814	(146040715)	C	L2b	LINE/L2	(0)	3375	2540	2051634
18	22.1	2.1	0.0	chr2	96266002	96266048	(145927481)	+	(TCC)n	Simple_repeat	1	48	(0)	2051857
13	20.9	5.0	0.0	chr2	96532300	96532339	(145661190)	+	(TTCT)n	Simple_repeat	1	42	(0)	2052303
230	24.4	7.0	4.0	chr2	96532506	96532631	(145660898)	+	MIR	SINE/MIR	83	220	(48)	2052304
16	16.6	0.0	0.0	chr2	99336696	99336722	(142856807)	+	(T)n	Simple_repeat	1	27	(0)	2056309
2030	21.0	6.2	4.0	chr2	99476581	99477078	(142716451)	+	MER77	LTR/ERVL	119	655	(45)	2056517
611	21.2	4.1	7.3	chr2	99477110	99477287	(142716242)	+	MLT1J	LTR/ERVL-MaLR	20	191	(321)	2056520
14	28.6	2.6	3.8	chr2	100417614	100417690	(141775839)	+	(CGCC)n	Simple_repeat	1	79	(0)	2057844
186	21.6	2.6	0.0	chr2	101002432	101002468	(141191061)	C	L3b	LINE/CR1	(101)	5131	5094	2058833
12	19.1	2.6	2.6	chr2	101308488	101308525	(140885004)	+	(GCCCGG)n	Simple_repeat	1	39	(0)	2059376
4836	11.8	2.5	3.6	chr2	104377901	104378703	(137814826)	C	LTR1A2	LTR/ERV1	(0)	837	44	2063460
860	29.6	8.8	1.3	chr2	104378825	104379253	(137814276)	+	LTR33A	LTR/ERVL	20	463	(57)	2063461
12	14.4	0.0	0.0	chr2	105248819	105248842	(136944687)	+	(GAG)n	Simple_repeat	1	24	(0)	2064636
445	19.5	8.6	3.8	chr2	105248904	105248996	(136944533)	C	MLT1J	LTR/ERVL-MaLR	(370)	142	41	2064637
1999	13.9	0.7	2.3	chr2	105248997	105249306	(136944223)	+	AluJo	SINE/Alu	2	306	(6)	2064638
618	25.5	5.3	2.7	chr2	106789246	106789467	(135404062)	C	MLT1J1	LTR/ERVL-MaLR	(154)	290	63	2067016
15	14.0	2.2	6.5	chr2	108449228	108449272	(133744257)	+	(GCG)n	Simple_repeat	1	46	(0)	2069253
705	28.2	9.9	7.3	chr2	111585776	111586188	(130607341)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	86	2073730
180	28.5	8.9	3.1	chr2	112181575	112181701	(130011828)	+	L2b	LINE/L2	3213	3347	(28)	2074679
22	16.9	6.4	3.6	chr2	113157360	113157371	(129036158)	+	(CCCG)n	Simple_repeat	43	83	(0)	2076329
1060	25.2	9.5	5.8	chr2	118197121	118197605	(123995924)	C	MLT1J	LTR/ERVL-MaLR	(7)	505	1	2083336
702	28.1	3.7	7.9	chr2	121050223	121050745	(121142784)	+	LTR67B	LTR/ERVL	25	614	(6)	2087962
12	18.1	0.0	3.0	chr2	121530606	121530638	(120662891)	+	(CGCCC)n	Simple_repeat	1	33	(0)	2088812
720	23.7	27.0	0.9	chr2	122168714	122169061	(120024468)	+	LTR50	LTR/ERVL	1	448	(347)	2089990
2574	16.2	7.5	0.3	chr2	122169190	122169674	(120023855)	+	MER68	LTR/ERVL	1	597	(7)	2089991
332	32.7	5.9	2.2	chr2	124353723	124353950	(117839579)	+	L1M6	LINE/L1	488	724	(5772)	2093035
997	29.8	8.2	4.1	chr2	125706750	125707217	(116486312)	C	LTR33A	LTR/ERVL	(0)	520	32	2094959
580	22.5	9.0	0.0	chr2	127365149	127365299	(114828230)	C	MIRb	SINE/MIR	(3)	265	100	2097315
298	19.4	13.3	1.7	chr2	127365394	127365493	(114828036)	+	LTR33C	LTR/ERVL	1	104	(559)	2097316
1590	23.8	3.5	0.3	chr2	127365538	127365924	(114827605)	+	LTR33C	LTR/ERVL	220	619	(10)	2097316
19	6.5	3.1	0.0	chr2	127886610	127886641	(114306888)	+	(CCTCG)n	Simple_repeat	1	33	(0)	2098185
2587	17.8	7.4	0.9	chr2	129710159	129710713	(112482816)	C	LTR49	LTR/ERV1	(1)	594	1	2100758
305	27.1	8.5	0.8	chr2	129758720	129758849	(112434680)	+	MIRb	SINE/MIR	54	194	(74)	2100823
11	19.9	0.0	8.3	chr2	129758868	129758915	(112434614)	+	(CACCCA)n	Simple_repeat	1	48	(0)	2100824
307	21.9	0.0	0.0	chr2	130337127	130337199	(111856330)	C	tRNA-Glu-GAG_	tRNA	(2)	73	1	2101680
590	23.2	8.5	3.0	chr2	134178453	134178652	(108014877)	C	LTR33A	LTR/ERVL	(308)	212	1	2107054
13	11.1	3.2	3.1	chr2	135876443	135876473	(106317056)	+	(CGC)n	Simple_repeat	1	32	(0)	2109773
13	14.8	8.5	2.0	chr2	135985449	135985495	(106208034)	+	(CTGGACA)n	Simple_repeat	1	51	(0)	2109962
1187	27.6	11.2	3.1	chr2	137023047	137023502	(105170027)	C	LTR33A	LTR/ERVL	(2)	518	21	2111533
12	4.5	4.0	3.9	chr2	148020984	148021008	(94172521)	+	(TCC)n	Simple_repeat	1	26	(0)	2126016
24	13.8	0.0	7.7	chr2	148644625	148644689	(93548840)	+	GA-rich	Low_complexity	1	65	(0)	2126931
13	7.2	6.5	3.0	chr2	148644959	148644989	(93548540)	+	(CCG)n	Simple_repeat	1	33	(0)	2126932
14	14.9	5.4	0.0	chr2	148875178	148875214	(93318315)	+	G-rich	Low_complexity	1	39	(0)	2127292
17	16.1	3.9	3.7	chr2	148875338	148875389	(93318140)	+	G-rich	Low_complexity	1	54	(0)	2127293
2324	6.9	3.9	6.6	chr2	151409228	151409547	(90783982)	C	AluSx	SINE/Alu	(1)	311	1	2130855
193	32.4	10.2	1.9	chr2	151409614	151409720	(90783809)	+	MIRc	SINE/MIR	22	138	(130)	2130856
21	9.5	0.0	0.0	chr2	151409773	151409806	(90783723)	+	(GGGAA)n	Simple_repeat	1	34	(0)	2130857
18	16.8	0.0	6.1	chr2	152335084	152335133	(89858396)	+	G-rich	Low_complexity	1	46	(0)	2132279
230	31.1	6.8	2.4	chr2	153046994	153047161	(89146368)	+	L2c	LINE/L2	2918	3093	(294)	2133308
1170	23.7	11.1	1.3	chr2	153047349	153047848	(89145681)	+	MLT2F	LTR/ERVL	3	607	(56)	2133309
12	22.8	1.7	6.8	chr2	153478574	153478631	(88714898)	+	G-rich	Low_complexity	1	59	(0)	2133770
14	16.9	3.0	0.0	chr2	153478867	153478899	(88714630)	+	(GGC)n	Simple_repeat	1	34	(0)	2133771
3201	13.7	1.9	0.0	chr2	153678180	153678683	(88514846)	+	L1PA15	LINE/L1	5644	6157	(8)	2133995
555	21.4	5.1	3.0	chr2	153678828	153678962	(88514567)	+	MLT2F	LTR/ERVL	4	141	(522)	2133996
1035	26.8	8.1	2.2	chr2	153678970	153679339	(88514190)	+	MLT2F	LTR/ERVL	270	663	(0)	2133996
20	16.4	0.0	0.0	chr2	156332922	156332955	(85860574)	+	(T)n	Simple_repeat	1	34	(0)	2137288
15	8.8	5.0	4.8	chr2	156436293	156436332	(85757197)	+	G-rich	Low_complexity	1	42	(0)	2137474
2396	22.2	12.3	0.0	chr2	158766169	158766717	(83426812)	+	LTR33C	LTR/ERVL	1	626	(3)	2140529
5005	11.1	1.5	0.5	chr2	163661954	163662688	(78530841)	+	THE1A-int	LTR/ERVL-MaLR	1	742	(838)	2147276
2541	8.8	0.6	1.4	chr2	163662695	163663052	(78530477)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2147276
263	28.6	1.3	0.0	chr2	165070138	165070214	(77123315)	+	LTR33C	LTR/ERVL	1	78	(551)	2149188
26	0.0	0.0	0.0	chr2	165294011	165294038	(76899491)	+	(A)n	Simple_repeat	1	28	(0)	2149492
14	13.1	9.5	0.0	chr2	168456095	168456136	(73737393)	+	(TGCGCCC)n	Simple_repeat	1	46	(0)	2153583
28	14.8	0.0	1.9	chr2	168456296	168456349	(73737180)	+	(GCG)n	Simple_repeat	1	54	(0)	2153584
473	24.9	5.8	1.0	chr2	169574109	169574303	(72619226)	C	MER5C	DNA/hAT-Charlie	(72)	241	37	2155203
29	0.0	0.0	0.0	chr2	169733603	169733627	(72459902)	+	(CA)n	Simple_repeat	1	25	(0)	2155495
14	20.2	4.3	2.0	chr2	173354872	173354918	(68838611)	+	(GCT)n	Simple_repeat	1	49	(0)	2161545
527	31.4	2.0	1.0	chr2	176614037	176614229	(65579300)	C	MLT1J2	LTR/ERVL-MaLR	(7)	441	247	2166404
410	14.5	2.6	0.0	chr2	176614280	176614355	(65579174)	C	MLT1J2	LTR/ERVL-MaLR	(332)	180	103	2166404
30	17.0	4.0	1.3	chr2	177264625	177264698	(64928831)	+	(CGG)n	Simple_repeat	1	77	(0)	2167361
14	25.2	5.0	3.6	chr2	177392828	177392907	(64800622)	+	G-rich	Low_complexity	1	84	(0)	2167595
932	26.4	3.7	3.6	chr2	181252597	181253045	(60940484)	C	LTR33A	LTR/ERVL	(0)	520	4	2172493
21	8.9	0.0	2.6	chr2	181892203	181892211	(60301318)	+	(CGAGGA)n	Simple_repeat	1	37	(0)	2173264
18	7.6	0.0	0.0	chr2	181892212	181892239	(60301290)	+	(AGG)n	Simple_repeat	1	28	(0)	2173265
14	30.1	1.6	1.6	chr2	182716123	182716185	(59477344)	+	(CGCCAC)n	Simple_repeat	1	64	(0)	2174385
735	23.3	18.3	7.4	chr2	183010118	183010559	(59182970)	+	MLT1H	LTR/ERVL-MaLR	47	579	(0)	2174777
16	26.1	3.4	0.0	chr2	186590241	186590299	(55603230)	+	G-rich	Low_complexity	1	61	(0)	2179278
17	3.2	5.9	2.8	chr2	189784481	189784514	(52409015)	+	(GCGGGT)n	Simple_repeat	1	36	(0)	2183366
14	14.2	3.2	0.0	chr2	190343878	190343908	(51849621)	+	(CCT)n	Simple_repeat	1	32	(0)	2184207
11	24.0	4.5	0.0	chr2	190344130	190344173	(51849356)	+	(GGCCCC)n	Simple_repeat	1	46	(0)	2184208
1654	15.4	9.5	0.0	chr2	190766338	190766604	(51426925)	+	AluJb	SINE/Alu	2	296	(16)	2184857
939	21.3	13.9	5.5	chr2	190766605	190766919	(51426610)	C	MLT1J2	LTR/ERVL-MaLR	(69)	379	24	2184856
395	21.9	10.4	4.2	chr2	191019976	191020190	(51173339)	+	L1ME4a	LINE/L1	5819	6048	(76)	2185240
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
13	13.2	6.7	4.2	chr2	196593438	196593482	(45600047)	+	(CCGCGGTG)n	Simple_repeat	1	48	(0)	2192634
13	25.0	2.0	2.0	chr2	196593698	196593746	(45599783)	+	(GGCTGA)n	Simple_repeat	1	50	(0)	2192635
20	18.7	1.4	7.0	chr2	197705224	197705240	(44488289)	+	(GGCG)n	Simple_repeat	1	66	(0)	2194510
21	14.3	2.1	2.0	chr2	197705241	197705288	(44488241)	+	(GGCGG)n	Simple_repeat	1	49	(0)	2194511
1005	26.3	9.8	5.5	chr2	197884104	197884562	(44308967)	C	MLT1J	LTR/ERVL-MaLR	(30)	482	2	2194720
1092	33.5	4.6	3.4	chr2	197884632	197885157	(44308372)	+	L2a	LINE/L2	2541	3074	(345)	2194721
15	9.4	5.6	2.6	chr2	199659288	199659323	(42534206)	+	(CCGAG)n	Simple_repeat	1	38	(0)	2197159
315	25.4	6.3	8.5	chr2	199955997	199956125	(42237404)	+	L1MDb	LINE/L1	649	774	(5635)	2197597
11	24.9	2.0	3.9	chr2	200307261	200307311	(41886218)	+	(CGCCCG)n	Simple_repeat	1	52	(0)	2198138
13	20.5	0.0	4.7	chr2	201451406	201451448	(40742081)	+	(GCAGCC)n	Simple_repeat	1	43	(0)	2200073
11	19.5	2.1	6.2	chr2	201451779	201451825	(40741704)	+	(GCCCCGC)n	Simple_repeat	1	48	(0)	2200074
2370	7.8	0.0	3.1	chr2	202265464	202265588	(39927941)	+	AluSc	SINE/Alu	194	309	(0)	2201570
577	23.6	0.6	0.0	chr2	204546303	204546459	(37647070)	+	MER5A1	DNA/hAT-Charlie	9	166	(0)	2205788
15	10.9	4.4	6.4	chr2	206085808	206085852	(36107677)	+	(GCCC)n	Simple_repeat	1	47	(0)	2207944
1243	26.4	9.1	3.2	chr2	206423073	206423483	(35770046)	C	MLT1J2	LTR/ERVL-MaLR	(10)	438	1	2208603
18	15.4	6.3	4.5	chr2	207530139	207530201	(34663328)	+	GA-rich	Low_complexity	1	67	(0)	2210181
14	13.2	2.9	2.8	chr2	209771905	209771939	(32421590)	+	G-rich	Low_complexity	1	36	(0)	2213450
500	20.6	5.7	2.0	chr2	210003041	210003186	(32190343)	C	MIR3	SINE/MIR	(24)	184	34	2213766
17	14.2	0.0	0.0	chr2	216372298	216372328	(25821201)	+	(CCG)n	Simple_repeat	1	31	(0)	2222623
349	34.3	5.8	0.5	chr2	217248107	217248320	(24945209)	+	MIRb	SINE/MIR	1	226	(42)	2224114
1920	15.0	0.7	1.0	chr2	217626642	217626934	(24566595)	+	AluJr	SINE/Alu	1	292	(20)	2224693
866	30.9	7.1	2.1	chr2	217627008	217627341	(24566188)	+	MLT1J2	LTR/ERVL-MaLR	5	356	(92)	2224694
1128	21.8	10.2	4.4	chr2	217650328	217650740	(24542789)	+	MLT1J1	LTR/ERVL-MaLR	1	440	(4)	2224731
1055	22.8	16.2	1.7	chr2	217650806	217651158	(24542371)	+	LTR50	LTR/ERVL	1	414	(381)	2224732
12	13.9	6.2	0.0	chr2	218021840	218021871	(24171658)	+	(AGCC)n	Simple_repeat	1	34	(0)	2225346
23	12.1	2.5	13.2	chr2	218022123	218022240	(24171289)	+	GA-rich	Low_complexity	1	121	(0)	2225347
17	4.9	0.0	0.0	chr2	218027108	218027128	(24166401)	+	(CA)n	Simple_repeat	1	21	(0)	2225358
1766	13.1	3.1	1.7	chr2	218710331	218710620	(23482909)	+	AluJr	SINE/Alu	1	294	(18)	2226676
530	31.1	6.7	3.0	chr2	218908586	218908787	(23284742)	+	MIRb	SINE/MIR	35	244	(24)	2227016
12	8.8	4.2	0.0	chr2	218961945	218961968	(23231561)	+	(GGAG)n	Simple_repeat	1	25	(0)	2227118
12	22.1	0.0	0.0	chr2	219176901	219176932	(23016597)	+	(TGCC)n	Simple_repeat	1	32	(0)	2227457
14	16.4	2.9	0.0	chr2	219176946	219176979	(23016550)	+	(CGCCCT)n	Simple_repeat	1	35	(0)	2227458
387	37.6	4.1	3.5	chr2	219278767	219279080	(22914449)	C	L2c	LINE/L2	(0)	3387	3072	2227637
14	26.2	0.0	6.1	chr2	219511708	219511773	(22681756)	+	G-rich	Low_complexity	1	66	(0)	2228050
1071	23.3	6.3	3.2	chr2	219713029	219713428	(22480101)	C	MLT1J	LTR/ERVL-MaLR	(68)	380	1	2228371
2451	28.0	9.4	4.5	chr2	219974571	219974929	(22218600)	C	L1M6	LINE/L1	(5361)	1135	739	2228804
364	25.7	11.1	4.9	chr2	219974997	219975139	(22218390)	C	L1M6	LINE/L1	(5856)	640	488	2228804
893	27.1	9.3	6.3	chr2	220736619	220737106	(21456423)	C	MLT1J	LTR/ERVL-MaLR	(1)	511	8	2229989
12	20.9	0.0	7.8	chr2	223837325	223837375	(18356154)	+	(GGCCC)n	Simple_repeat	1	51	(0)	2234958
49	20.2	3.3	5.9	chr2	223837625	223837804	(18355725)	+	(CCT)n	Simple_repeat	1	186	(0)	2234959
1040	25.1	14.3	9.4	chr2	223952056	223952544	(18240985)	+	LTR33A	LTR/ERVL	4	520	(0)	2235177
182	29.6	0.0	0.0	chr2	224222265	224222308	(17971221)	+	MIR	SINE/MIR	213	256	(6)	2235581
558	23.4	2.0	1.4	chr2	224222390	224222536	(17970993)	+	MLT1J1	LTR/ERVL-MaLR	1	148	(296)	2235582
314	36.4	1.2	2.4	chr2	224222643	224222808	(17970721)	C	L2	LINE/L2	(567)	2852	2689	2235583
560	30.6	12.5	4.4	chr2	227221165	227221530	(14971999)	+	L2a	LINE/L2	857	1256	(2163)	2240104
185	39.5	9.9	0.0	chr2	229636498	229636606	(12556923)	C	MIR3	SINE/MIR	(48)	160	40	2243849
803	27.4	6.9	1.7	chr2	229636684	229636973	(12556556)	+	MLT1J1	LTR/ERVL-MaLR	21	326	(118)	2243850
208	26.2	1.6	0.0	chr2	231052833	231052893	(11140636)	C	MIRb	SINE/MIR	(186)	82	21	2246150
197	31.4	13.2	0.8	chr2	231198304	231198422	(10995107)	+	L2b	LINE/L2	3239	3374	(1)	2246402
14	28.3	2.0	0.0	chr2	231198609	231198659	(10994870)	+	(CGG)n	Simple_repeat	1	52	(0)	2246403
333	26.7	12.8	5.1	chr2	231612938	231613095	(10580434)	C	MIR	SINE/MIR	(55)	213	42	2247264
13	11.0	9.8	2.2	chr2	231662447	231662487	(10531042)	+	(CCGCT)n	Simple_repeat	1	45	(0)	2247398
12	18.3	5.4	0.0	chr2	231708162	231708198	(10485331)	+	G-rich	Low_complexity	1	39	(0)	2247478
283	27.0	1.8	0.4	chr2	231715008	231715117	(10478412)	+	MIRc	SINE/MIR	47	156	(74)	2247484
210	32.5	2.5	6.5	chr2	232521589	232521756	(9671773)	C	L2c	LINE/L2	(308)	3079	2919	2248792
13	27.2	3.1	3.0	chr2	232633534	232633598	(9559931)	+	(CCGC)n	Simple_repeat	1	67	(0)	2249014
21	12.8	6.2	4.3	chr2	232633636	232633700	(9559829)	+	(CGCGTCC)n	Simple_repeat	1	69	(0)	2249015
21	18.8	3.3	7.5	chr2	232633795	232633885	(9559644)	+	(GCCCGA)n	Simple_repeat	1	94	(0)	2249016
772	25.8	2.4	4.8	chr2	233813920	233814171	(8379358)	C	MLT1J1	LTR/ERVL-MaLR	(9)	435	190	2250989
369	21.6	2.6	0.0	chr2	233814183	233814256	(8379273)	C	MLT1J1	LTR/ERVL-MaLR	(308)	140	65	2250989
1190	24.9	7.4	10.1	chr2	234116703	234117176	(8076353)	+	MLT1J	LTR/ERVL-MaLR	3	462	(50)	2251394
357	26.0	3.4	15.5	chr2	234682603	234682802	(7510727)	C	MLT1H	LTR/ERVL-MaLR	(242)	307	133	2252368
343	26.3	10.0	0.0	chr2	234682736	234682834	(7510695)	C	MLT2E	LTR/ERVL	(487)	141	32	2252369
176	25.8	0.9	1.3	chr2	234682847	234683303	(7510226)	+	(GTG)n	Simple_repeat	1	461	(0)	2252370
526	31.6	7.6	4.6	chr2	236133313	236133657	(6059872)	C	MLT1J	LTR/ERVL-MaLR	(49)	463	108	2254557
27	19.5	1.5	1.5	chr2	236167745	236167810	(6025719)	+	(GGC)n	Simple_repeat	1	67	(0)	2254615
211	24.5	3.9	2.0	chr2	236621847	236621896	(5571633)	C	L3	LINE/CR1	(126)	3973	3923	2255255
11	20.6	5.1	0.0	chr2	238096819	238096857	(4096672)	+	(AGTGCCG)n	Simple_repeat	1	41	(0)	2257364
294	22.8	3.8	3.8	chr2	238096983	238097087	(4096442)	C	L2b	LINE/L2	(191)	3184	3080	2257365
239	29.1	0.0	0.0	chr2	238105902	238105987	(4087542)	+	L2b	LINE/L2	2997	3082	(293)	2257372
209	29.9	8.4	1.1	chr2	238106151	238106238	(4087291)	+	L2b	LINE/L2	3290	3384	(3)	2257372
19	6.6	3.1	0.0	chr2	238231775	238231806	(3961723)	+	(AAAC)n	Simple_repeat	1	33	(0)	2257541
12	16.5	0.0	0.0	chr2	238234416	238234442	(3959087)	+	(GGCGG)n	Simple_repeat	1	27	(0)	2257542
200	25.3	14.9	1.1	chr2	239751189	239751280	(2442249)	C	MIRb	SINE/MIR	(48)	220	114	2259284
45	4.2	0.0	0.0	chr2	240025167	240025216	(2168313)	+	(CCACCCCG)n	Simple_repeat	1	50	(0)	2259594
20	29.8	0.0	0.0	chr2	240393240	240393296	(1800233)	+	(AC)n	Simple_repeat	1	57	(0)	2260005
2413	6.5	0.3	0.0	chr2	241101771	241102063	(1091466)	+	AluSx1	SINE/Alu	1	294	(18)	2260682
29	29.1	1.3	5.2	chr2	241218397	241218547	(974982)	+	(GGCGG)n	Simple_repeat	1	153	(0)	2260835
183	33.0	8.0	1.9	chr2	241576402	241576506	(617023)	C	MER5A	DNA/hAT-Charlie	(75)	114	3	2261367
235	17.9	0.0	0.0	chr2	241617614	241617652	(575877)	C	L3	LINE/CR1	(6)	4093	4055	2261438
286	24.5	1.1	1.1	chr20	288761	288855	(64155312)	+	MER20B	DNA/hAT-Charlie	653	747	(36)	2262566
617	17.8	9.8	0.0	chr20	288856	288984	(64155183)	C	MIRb	SINE/MIR	(81)	187	45	2262567
1630	26.3	2.3	3.4	chr20	289030	289474	(64154693)	+	MLT1J2	LTR/ERVL-MaLR	1	440	(8)	2262568
14	8.5	4.7	6.7	chr20	297647	297689	(64146478)	+	(CCCGGCGG)n	Simple_repeat	1	45	(0)	2262587
461	22.6	8.2	8.7	chr20	434363	434589	(64009578)	C	MER21C	LTR/ERVL	(629)	309	9	2262934
12	14.6	0.0	5.9	chr20	584531	584564	(63859603)	+	(CAGAGG)n	Simple_repeat	1	34	(0)	2263246
864	24.5	0.5	0.0	chr20	584577	584764	(63859403)	C	MLT1J	LTR/ERVL-MaLR	(318)	194	6	2263247
2206	10.5	0.0	0.0	chr20	769615	769918	(63674249)	+	AluSz	SINE/Alu	1	304	(8)	2263718
785	25.6	9.7	7.9	chr20	769926	770051	(63674116)	+	MLT1J	LTR/ERVL-MaLR	71	211	(301)	2263719
2841	10.9	7.4	4.8	chr20	770052	770155	(63674012)	C	MER75	DNA/PiggyBac	(0)	514	429	2263720
14	17.4	0.0	2.9	chr20	968153	968187	(63475980)	+	G-rich	Low_complexity	1	35	(0)	2264128
1984	24.1	1.9	0.5	chr20	968232	968657	(63475510)	+	MLT1J	LTR/ERVL-MaLR	74	505	(7)	2264129
653	16.6	2.5	7.6	chr20	1005777	1005939	(63438228)	C	MLT1J2	LTR/ERVL-MaLR	(276)	168	14	2264224
214	25.6	16.5	0.0	chr20	1005956	1006041	(63438126)	+	L2	LINE/L2	2694	2796	(623)	2264225
526	17.7	5.8	2.6	chr20	1475044	1475159	(62969008)	C	MER20	DNA/hAT-Charlie	(99)	120	1	2265071
771	29.6	6.1	1.5	chr20	1475273	1475536	(62968631)	+	MLT1J	LTR/ERVL-MaLR	1	277	(235)	2265072
561	28.1	1.4	0.7	chr20	1802964	1803110	(62641057)	C	MIR1_Amn	SINE/MIR	(79)	151	4	2265625
22	10.4	7.4	1.7	chr20	1803360	1803413	(62640754)	+	(CCGCT)n	Simple_repeat	1	58	(0)	2265626
625	16.5	1.0	0.0	chr20	2051990	2052092	(62392075)	+	MLT1J1	LTR/ERVL-MaLR	13	116	(328)	2266175
620	24.2	12.1	0.6	chr20	2052093	2052275	(62391892)	C	MER63B	DNA/hAT-Blackjack	(0)	436	230	2266176
1087	25.9	10.4	1.8	chr20	2471024	2471471	(61972696)	+	L2a	LINE/L2	2926	3416	(10)	2267029
17	0.0	0.0	0.0	chr20	2799606	2799624	(61644543)	+	(CT)n	Simple_repeat	1	19	(0)	2267613
72	32.7	0.4	0.8	chr20	2800073	2800312	(61643855)	+	(GT)n	Simple_repeat	1	241	(0)	2267614
763	15.0	0.8	0.0	chr20	3658829	3658948	(60785219)	+	AluJr	SINE/Alu	184	304	(8)	2269267
260	8.2	2.5	3.0	chr20	3658996	3659045	(60785122)	C	MLT1J	LTR/ERVL-MaLR	(416)	146	91	2269268
220	28.1	10.4	3.2	chr20	3659100	3659224	(60784943)	C	MIR3	SINE/MIR	(41)	167	33	2269269
760	29.1	10.2	0.6	chr20	3687795	3688147	(60756020)	+	MLT1J	LTR/ERVL-MaLR	91	481	(31)	2269315
13	23.8	2.2	2.1	chr20	3820503	3820548	(60623619)	+	(GCGC)n	Simple_repeat	1	47	(0)	2269563
521	13.4	2.4	0.0	chr20	5119169	5119250	(59324917)	+	FLAM_A	SINE/Alu	44	127	(15)	2272054
13	24.0	0.0	0.0	chr20	6006258	6006296	(58437871)	+	(GCGCGCG)n	Simple_repeat	1	39	(0)	2273691
638	21.4	10.3	1.7	chr20	6044216	6044430	(58399737)	+	MLT1J1	LTR/ERVL-MaLR	59	297	(114)	2273755
13	26.5	1.6	4.6	chr20	10219528	10219591	(54224576)	+	G-rich	Low_complexity	1	65	(0)	2280188
18	19.5	2.7	6.7	chr20	10219592	10219597	(54224570)	+	(GCGG)n	Simple_repeat	4	75	(0)	2280189
1365	27.6	4.7	5.7	chr20	10789276	10789712	(53654455)	C	MLT1J2	LTR/ERVL-MaLR	(13)	435	1	2281045
754	28.7	4.8	0.4	chr20	11581336	11581573	(52862594)	C	MLT1J2	LTR/ERVL-MaLR	(199)	249	1	2282184
758	27.3	3.4	2.0	chr20	12594588	12594789	(51849378)	C	MER58A	DNA/hAT-Charlie	(0)	224	20	2283639
762	21.1	9.8	4.4	chr20	12594797	12594999	(51849168)	C	MLT1J2	LTR/ERVL-MaLR	(186)	262	48	2283640
1235	24.4	12.1	4.6	chr20	13139321	13139732	(51304435)	C	MLT1J2	LTR/ERVL-MaLR	(1)	447	1	2284425
533	31.6	7.8	5.6	chr20	13265840	13266251	(51177916)	C	MLT1J	LTR/ERVL-MaLR	(90)	422	1	2284631
190	20.4	0.0	10.9	chr20	17233599	17233653	(47210514)	C	LFSINE_Vert	SINE/tRNA	(162)	297	249	2290541
630	29.7	3.6	0.7	chr20	17233725	17234009	(47210158)	+	MLT1J1	LTR/ERVL-MaLR	9	303	(145)	2290542
314	19.0	0.0	0.0	chr20	17234025	17234082	(47210085)	+	MLT1J1	LTR/ERVL-MaLR	348	405	(39)	2290542
817	23.1	3.2	7.8	chr20	17525714	17525971	(46918196)	+	MLT1J	LTR/ERVL-MaLR	17	262	(250)	2291028
18	4.7	0.0	0.0	chr20	17526139	17526160	(46918007)	+	(G)n	Simple_repeat	1	22	(0)	2291029
3830	15.3	2.9	2.4	chr20	17526162	17526884	(46917283)	C	L1MB3	LINE/L1	(12)	6171	5445	2291030
390	26.9	16.6	2.4	chr20	17761542	17761747	(46682420)	C	MLT1J2	LTR/ERVL-MaLR	(6)	442	202	2291415
1025	24.8	17.6	1.9	chr20	17854181	17854543	(46589624)	C	LTR33A_	LTR/ERVL	(77)	443	16	2291614
26	12.3	0.0	0.0	chr20	18056765	18056838	(46387329)	+	(CGCTGC)n	Simple_repeat	1	74	(0)	2292018
618	26.6	3.9	9.1	chr20	18793954	18794451	(45649716)	+	MLT2F	LTR/ERVL	5	663	(0)	2293236
967	30.7	6.1	3.2	chr20	18922745	18923175	(45520992)	C	MLT1J2	LTR/ERVL-MaLR	(4)	444	1	2293436
581	27.9	13.0	4.9	chr20	21096261	21096527	(43347640)	C	MLT1J1	LTR/ERVL-MaLR	(115)	329	38	2296597
278	26.9	1.3	0.0	chr20	21776470	21776547	(42667620)	+	LTR33C	LTR/ERVL	1	79	(550)	2297571
441	29.4	10.0	3.1	chr20	21776622	21777011	(42667156)	+	MLT2F	LTR/ERVL	239	658	(5)	2297572
1266	26.1	6.5	2.7	chr20	22686187	22686628	(41757539)	+	LTR33A	LTR/ERVL	33	492	(28)	2298737
13	3.7	0.0	11.4	chr20	23421480	23421514	(41022653)	+	(CGCAGG)n	Simple_repeat	1	35	(0)	2299690
354	27.5	6.4	0.0	chr20	24199691	24199821	(40244346)	C	MLT1J	LTR/ERVL-MaLR	(370)	142	3	2300613
18	19.2	0.0	8.6	chr20	24469488	24469557	(39974610)	+	(CCCGGCG)n	Simple_repeat	1	70	(0)	2300952
15	22.1	9.6	0.0	chr20	24469540	24469663	(39974504)	+	(GCGCAGG)n	Simple_repeat	1	135	(0)	2300953
12	19.1	2.6	2.6	chr20	25058488	25058525	(39385642)	+	(GGCCCAG)n	Simple_repeat	1	39	(0)	2301647
6465	13.2	2.7	0.9	chr20	30849917	30850867	(33593300)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2305515
11700	31.6	3.7	2.2	chr20	30850868	30853617	(33590550)	+	PRIMA41-int	LTR/ERV1	1728	4517	(3239)	2305514
871	24.5	14.7	0.6	chr20	32005005	32005353	(32438814)	+	MLT1J	LTR/ERVL-MaLR	1	407	(105)	2307388
198	24.8	4.0	9.1	chr20	32109192	32109323	(32334844)	C	L2a	LINE/L2	(62)	3364	3221	2307691
197	26.3	1.7	0.0	chr20	32345010	32345066	(32099101)	C	L2b	LINE/L2	(9)	3366	3309	2308263
19	17.7	0.0	2.5	chr20	32358330	32358369	(32085798)	+	(CA)n	Simple_repeat	1	40	(0)	2308298
50	26.2	3.6	4.7	chr20	32358520	32358766	(32085401)	+	(GCC)n	Simple_repeat	1	256	(0)	2308299
823	21.1	6.3	4.6	chr20	33183034	33183252	(31260915)	+	MIRb	SINE/MIR	41	263	(5)	2310126
888	23.0	12.6	4.1	chr20	33183378	33183667	(31260500)	+	MLT1J	LTR/ERVL-MaLR	10	327	(185)	2310127
445	18.3	0.0	0.0	chr20	33418187	33418257	(31025910)	+	MLT1J	LTR/ERVL-MaLR	78	148	(364)	2310662
1206	16.2	6.1	0.0	chr20	33418258	33418473	(31025694)	C	AluJr	SINE/Alu	(12)	300	71	2310663
17	8.5	2.3	6.8	chr20	33667260	33667302	(30776865)	+	G-rich	Low_complexity	1	44	(0)	2311305
11	21.1	2.5	2.4	chr20	33667534	33667573	(30776594)	+	(GGCGCG)n	Simple_repeat	1	41	(0)	2311306
21	26.9	2.1	4.1	chr20	33811326	33811395	(30632772)	+	(GCGGAG)n	Simple_repeat	1	69	(0)	2311672
33	2.8	0.0	0.0	chr20	33811396	33811431	(30632736)	+	(GAGCC)n	Simple_repeat	1	36	(0)	2311673
218	27.4	13.8	1.9	chr20	34312916	34313023	(30131144)	C	MIRc	SINE/MIR	(72)	196	74	2312750
1491	17.3	7.8	0.0	chr20	34313077	34313243	(30130924)	C	AluJo	SINE/Alu	(7)	305	137	2312751
31	0.0	0.0	0.0	chr20	34313244	34313272	(30130895)	+	(T)n	Simple_repeat	1	29	(0)	2312752
1491	17.3	7.8	0.0	chr20	34313273	34313376	(30130791)	C	AluJo	SINE/Alu	(196)	116	12	2312751
367	32.1	9.3	4.4	chr20	34516788	34516992	(29927175)	C	MIR	SINE/MIR	(9)	253	38	2313240
14	13.6	0.0	5.6	chr20	34677094	34677129	(29767038)	+	G-rich	Low_complexity	1	36	(0)	2313590
431	26.2	0.9	2.5	chr20	35147526	35147649	(29296518)	C	MIRb	SINE/MIR	(0)	268	156	2314634
875	25.2	6.1	4.0	chr20	35227353	35227625	(29216542)	+	L3	LINE/CR1	3712	3990	(109)	2314818
13	12.1	5.0	4.8	chr20	35601756	35601795	(28842372)	+	G-rich	Low_complexity	1	42	(0)	2315649
412	30.0	17.6	0.5	chr20	35699929	35700139	(28744028)	+	MIR	SINE/MIR	8	262	(0)	2315847
761	25.4	7.0	2.7	chr20	36360070	36360288	(28083879)	C	MIR	SINE/MIR	(11)	251	23	2317426
215	33.3	9.1	0.0	chr20	36392195	36392284	(28051883)	C	L2	LINE/L2	(891)	2528	2430	2317507
679	26.2	3.3	5.9	chr20	36773162	36773389	(27670778)	C	MIRb	SINE/MIR	(8)	260	35	2318411
350	25.9	8.2	13.1	chr20	37328359	37328678	(27115489)	C	L2b	LINE/L2	(9)	3366	3064	2319753
184	25.0	0.0	0.0	chr20	37328655	37328702	(27115465)	+	MIR3	SINE/MIR	85	132	(76)	2319754
239	32.9	7.9	0.0	chr20	37626846	37626927	(26817240)	+	MIR3	SINE/MIR	88	176	(32)	2320429
224	20.8	4.0	0.0	chr20	37627081	37627128	(26817039)	+	MIR3	SINE/MIR	152	201	(7)	2320432
354	33.5	4.2	9.7	chr20	38369170	38369499	(26074668)	+	L2a	LINE/L2	3034	3344	(82)	2322031
790	26.8	22.6	0.3	chr20	38369520	38369891	(26074276)	+	LTR33A_	LTR/ERVL	75	529	(2)	2322032
261	21.5	12.2	0.0	chr20	38392351	38392415	(26051752)	+	MIRc	SINE/MIR	71	144	(124)	2322084
732	20.6	28.0	2.5	chr20	38392426	38392588	(26051579)	+	MLT1J1	LTR/ERVL-MaLR	1	203	(241)	2322085
51	8.1	0.0	0.0	chr20	38392589	38392654	(26051513)	+	(TC)n	Simple_repeat	1	66	(0)	2322086
732	24.4	5.8	6.1	chr20	38392655	38392895	(26051272)	+	MLT1J1	LTR/ERVL-MaLR	204	443	(1)	2322085
233	19.2	1.9	0.0	chr20	38515337	38515388	(25928779)	C	L1M6	LINE/L1	(6288)	208	156	2322329
595	27.5	0.6	2.3	chr20	38628705	38628879	(25815288)	+	MIRb	SINE/MIR	18	189	(79)	2322505
696	23.4	1.1	0.6	chr20	39468677	39468848	(24975319)	+	MER5B	DNA/hAT-Charlie	6	178	(0)	2324205
378	22.6	2.8	1.9	chr20	39468849	39468954	(24975213)	C	MLT1J2	LTR/ERVL-MaLR	(297)	151	45	2324206
1221	23.0	9.2	5.5	chr20	41664457	41664874	(22779293)	C	MLT1J	LTR/ERVL-MaLR	(9)	503	69	2327881
953	30.4	7.8	6.2	chr20	41664895	41665812	(22778355)	C	L1M5	LINE/L1	(1483)	4663	3730	2327882
278	26.9	4.9	0.0	chr20	41693485	41693562	(22750605)	C	LTR91	LTR/ERVL	(45)	154	73	2327924
426	21.3	19.2	0.2	chr20	43238991	43239203	(21204964)	+	MLT1K	LTR/ERVL-MaLR	64	301	(147)	2330721
2350	8.0	0.0	0.3	chr20	43287283	43287568	(21156599)	+	AluSc	SINE/Alu	1	285	(24)	2330826
587	22.6	14.2	0.0	chr20	43287771	43287903	(21156264)	+	MLT1J	LTR/ERVL-MaLR	92	246	(266)	2330827
235	24.2	1.6	1.6	chr20	43287920	43287982	(21156185)	+	MLT1J	LTR/ERVL-MaLR	291	353	(159)	2330827
3574	12.7	1.7	0.9	chr20	43288036	43288158	(21156009)	C	MER1A	DNA/hAT-Charlie	(0)	529	408	2330828
16	26.6	2.0	1.9	chr20	43458260	43458310	(20985857)	+	(GC)n	Simple_repeat	1	52	(0)	2331218
935	20.7	6.5	0.9	chr20	44118762	44118980	(20325187)	+	MLT1J2	LTR/ERVL-MaLR	3	234	(214)	2332679
489	17.6	15.5	0.0	chr20	44233564	44233692	(20210475)	+	MIRc	SINE/MIR	20	175	(93)	2332974
608	22.0	9.9	2.0	chr20	44233778	44233972	(20210195)	+	MLT1J1	LTR/ERVL-MaLR	64	275	(169)	2332975
328	28.2	6.0	0.0	chr20	44233984	44234093	(20210074)	+	MLT1J1	LTR/ERVL-MaLR	328	444	(0)	2332975
571	27.5	4.2	5.0	chr20	44291829	44292046	(20152121)	C	MLT1J2	LTR/ERVL-MaLR	(232)	216	1	2333105
2195	10.5	1.0	0.7	chr20	44292106	44292399	(20151768)	+	AluSq	SINE/Alu	1	295	(18)	2333106
420	20.9	9.5	0.0	chr20	44717943	44718047	(19726120)	C	MER5A1	DNA/hAT-Charlie	(50)	116	1	2334172
751	28.7	12.2	2.1	chr20	44736275	44736562	(19707605)	C	MLT1J2	LTR/ERVL-MaLR	(127)	321	1	2334220
820	28.8	6.3	7.9	chr20	44736780	44737017	(19707150)	+	MLT1J2	LTR/ERVL-MaLR	38	257	(191)	2334221
1035	26.3	12.2	1.5	chr20	44738736	44739078	(19705089)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	64	2334226
1705	24.2	7.3	1.1	chr20	44739145	44739598	(19704569)	+	Tigger13a	DNA/TcMar-Tigger	7	492	(279)	2334227
28	0.0	0.0	0.0	chr20	45891599	45891624	(18552543)	+	(CTG)n	Simple_repeat	1	26	(0)	2336486
12	22.0	2.7	0.0	chr20	45934710	45934746	(18509421)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	2336591
232	28.2	9.0	0.0	chr20	46013858	46013928	(18430239)	C	MER91A	DNA/hAT-Tip100	(3)	193	116	2336782
193	30.1	6.4	0.0	chr20	46230858	46230930	(18213237)	C	MIRb	SINE/MIR	(157)	111	34	2337235
478	22.8	4.5	0.7	chr20	46231311	46231460	(18212707)	+	MER5B	DNA/hAT-Charlie	1	156	(22)	2337237
242	21.6	5.1	2.6	chr20	46694531	46694606	(17749561)	C	MLT1J	LTR/ERVL-MaLR	(20)	428	351	2338239
852	20.9	4.2	1.1	chr20	46694726	46694909	(17749258)	C	MLT1J	LTR/ERVL-MaLR	(314)	198	9	2338239
536	27.6	9.1	8.7	chr20	46694921	46695015	(17749152)	C	MLT1L	LTR/ERVL-MaLR	(12)	598	514	2338240
727	33.6	12.7	3.7	chr20	46739538	46740207	(17703960)	+	L2	LINE/L2	795	1533	(1886)	2338347
657	23.8	1.8	0.6	chr20	46740211	46740375	(17703792)	+	MLT1J	LTR/ERVL-MaLR	20	186	(326)	2338348
924	26.3	4.1	5.3	chr20	46740390	46740886	(17703281)	+	MLT1J	LTR/ERVL-MaLR	1	448	(0)	2338349
1524	24.4	9.9	1.3	chr20	46971188	46971640	(17472527)	C	MLT1J	LTR/ERVL-MaLR	(15)	497	2	2338907
1863	14.4	0.4	0.0	chr20	47150487	47150756	(17293411)	C	AluJr	SINE/Alu	(31)	281	11	2339330
853	17.5	13.9	4.7	chr20	47150766	47150999	(17293168)	C	MLT1J	LTR/ERVL-MaLR	(246)	266	8	2339317
467	30.1	17.1	0.4	chr20	47151000	47151088	(17293079)	+	L2c	LINE/L2	2754	2854	(565)	2339331
597	29.6	8.1	5.7	chr20	47181152	47181535	(17262632)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	55	2339416
820	16.8	0.8	0.0	chr20	47181543	47181667	(17262500)	C	FRAM	SINE/Alu	(46)	130	5	2339417
983	25.9	8.1	2.9	chr20	47391926	47392274	(17051893)	C	MLT1J	LTR/ERVL-MaLR	(63)	449	81	2339914
391	26.2	13.8	0.0	chr20	47392328	47392533	(17051634)	C	L1ME5	LINE/L1	(252)	5942	5704	2339915
20	19.0	0.0	6.6	chr20	47501914	47501974	(16942193)	+	(GCG)n	Simple_repeat	1	61	(0)	2340296
1100	25.4	10.7	7.3	chr20	47733792	47733946	(16710221)	+	Tigger18a	DNA/TcMar-Tigger	687	851	(1)	2340737
720	22.9	4.9	0.0	chr20	47733993	47734167	(16710000)	+	MLT1J	LTR/ERVL-MaLR	2	185	(327)	2340739
793	26.5	7.5	1.3	chr20	48098107	48098343	(16345824)	+	MLT1J	LTR/ERVL-MaLR	32	284	(228)	2341442
394	31.6	0.0	0.0	chr20	48467540	48467634	(15976533)	+	MER81	DNA/hAT-Blackjack	20	114	(0)	2342158
942	28.2	12.4	1.3	chr20	48467719	48468103	(15976064)	+	MLT1J	LTR/ERVL-MaLR	77	510	(2)	2342159
383	29.6	9.7	1.3	chr20	48702461	48702742	(15741425)	+	MLT1J	LTR/ERVL-MaLR	49	417	(95)	2342670
406	26.6	6.5	9.7	chr20	48839174	48839605	(15604562)	C	L1ME3Cz	LINE/L1	(5)	6189	5831	2342984
850	27.8	5.4	4.0	chr20	48839651	48839999	(15604168)	+	MLT1J1	LTR/ERVL-MaLR	64	417	(27)	2342985
12	10.7	2.9	5.7	chr20	48922075	48922108	(15522059)	+	(CTCGGC)n	Simple_repeat	1	35	(0)	2343220
237	33.9	8.3	0.0	chr20	48922142	48922262	(15521905)	C	MIR1_Amn	SINE/MIR	(78)	152	21	2343221
22	23.3	1.7	0.0	chr20	49188384	49188443	(15255724)	+	(GCCCCC)n	Simple_repeat	1	61	(0)	2343772
28	14.9	5.5	5.2	chr20	49188641	49188731	(15255436)	+	(CCTT)n	Simple_repeat	1	96	(0)	2343773
608	27.1	5.9	0.6	chr20	49188743	49188902	(15255265)	C	L2a	LINE/L2	(1)	3425	3257	2343774
852	18.7	22.8	0.0	chr20	49385516	49385774	(15058393)	+	MLT1J	LTR/ERVL-MaLR	5	316	(196)	2344283
29	13.1	5.0	0.0	chr20	49483055	49483144	(14961023)	+	(CTTT)n	Simple_repeat	1	94	(0)	2344537
237	10.3	2.5	4.9	chr20	49501966	49502006	(14942161)	+	Charlie16a	DNA/hAT-Charlie	1	40	(302)	2344587
904	21.1	15.6	1.9	chr20	49502027	49502291	(14941876)	+	MLT1J	LTR/ERVL-MaLR	100	407	(105)	2344588
297	30.1	8.3	2.7	chr20	50116121	50116267	(14327900)	+	MIR	SINE/MIR	107	262	(0)	2346116
14	10.3	2.9	5.6	chr20	50153672	50153706	(14290461)	+	(GGC)n	Simple_repeat	1	36	(0)	2346210
927	25.6	4.2	2.0	chr20	50335136	50335390	(14108777)	C	MLT1J1	LTR/ERVL-MaLR	(121)	323	63	2346670
645	21.3	7.3	1.2	chr20	50468077	50468242	(13975925)	+	MLT1J	LTR/ERVL-MaLR	2	178	(334)	2347018
804	29.4	8.2	8.9	chr20	50499468	50499691	(13944476)	C	MLT1J	LTR/ERVL-MaLR	(288)	224	13	2347110
322	26.6	0.0	0.0	chr20	50499702	50499780	(13944387)	C	LTR104_Mam	LTR/Gypsy	(412)	1097	1019	2347112
270	20.6	12.9	0.2	chr20	50992704	50992783	(13451384)	+	MIR	SINE/MIR	78	162	(100)	2348174
389	21.9	21.5	9.3	chr20	50992787	50993023	(13451144)	+	LTR33	LTR/ERVL	4	277	(238)	2348175
903	16.0	0.7	1.4	chr20	50993053	50993198	(13450969)	+	LTR41B	LTR/ERVL	1	145	(613)	2348176
19	11.2	5.1	0.0	chr20	51023134	51023172	(13420995)	+	GA-rich	Low_complexity	1	41	(0)	2348236
627	27.2	13.3	4.0	chr20	51199841	51200262	(13243905)	C	MLT1J	LTR/ERVL-MaLR	(4)	508	42	2348642
321	13.2	0.0	0.0	chr20	51340592	51340652	(13103515)	C	MLT1J	LTR/ERVL-MaLR	(363)	149	63	2348943
1550	28.3	5.7	0.6	chr20	52033193	52033675	(12410492)	C	MLT1J	LTR/ERVL-MaLR	(3)	509	1	2350590
726	29.1	2.0	4.3	chr20	52339818	52340063	(12104104)	+	MIRb	SINE/MIR	2	243	(25)	2351301
350	15.7	4.0	1.3	chr20	52340174	52340248	(12103919)	+	MLT1J	LTR/ERVL-MaLR	105	177	(385)	2351302
510	23.8	3.9	0.0	chr20	52340421	52340567	(12103600)	+	LTR16A	LTR/ERVL	290	442	(9)	2351303
506	24.6	2.3	1.6	chr20	53919080	53919207	(10524960)	C	MLT1J	LTR/ERVL-MaLR	(288)	224	96	2354668
2148	9.8	2.7	1.0	chr20	53919280	53919574	(10524593)	+	AluSx	SINE/Alu	2	301	(11)	2354669
791	30.1	9.9	5.4	chr20	54469236	54469811	(9974356)	+	L2a	LINE/L2	2726	3343	(83)	2355747
241	27.9	12.7	0.0	chr20	56359363	56359471	(8084696)	C	MIR3	SINE/MIR	(56)	152	33	2358877
355	23.9	13.7	4.1	chr20	56359556	56359825	(8084342)	+	MER113	DNA/hAT-Charlie	176	475	(46)	2358878
223	30.0	0.0	1.2	chr20	57351571	57351651	(7092516)	C	MIR3	SINE/MIR	(20)	188	109	2361036
188	28.8	14.4	2.3	chr20	57389711	57389838	(7054329)	C	L2b	LINE/L2	(4)	3371	3226	2361089
188	32.4	7.5	1.8	chr20	57391043	57391155	(7053012)	+	L2a	LINE/L2	3266	3385	(41)	2361092
12	17.2	4.9	2.3	chr20	57391207	57391247	(7052920)	+	(TCCGCCC)n	Simple_repeat	1	43	(0)	2361093
15	25.6	6.1	2.3	chr20	57391314	57391395	(7052772)	+	G-rich	Low_complexity	1	87	(0)	2361094
12	22.2	6.6	3.1	chr20	57391394	57391454	(7052713)	+	(GCGCA)n	Simple_repeat	1	65	(0)	2361095
310	34.7	12.9	1.4	chr20	58619581	58619855	(5824312)	C	L2a	LINE/L2	(5)	3421	3111	2363249
608	24.2	2.1	4.1	chr20	58619898	58620091	(5824076)	C	MIR	SINE/MIR	(13)	249	60	2363250
13	15.9	2.7	2.6	chr20	58890745	58890781	(5553386)	+	(CCACCG)n	Simple_repeat	1	38	(0)	2363582
16	23.9	0.0	2.4	chr20	58890782	58890822	(5553345)	+	(TG)n	Simple_repeat	1	41	(0)	2363583
461	28.7	10.4	5.4	chr20	59106883	59107272	(5336895)	C	MLT1J	LTR/ERVL-MaLR	(1)	511	100	2363945
301	22.1	1.3	1.3	chr20	59107418	59107495	(5336672)	C	L1MC5	LINE/L1	(2021)	7283	7206	2363946
955	21.6	2.5	4.2	chr20	59107495	59107583	(5336584)	C	L1MC5	LINE/L1	(593)	5571	5484	2363946
18	14.7	0.0	0.0	chr20	59604590	59604619	(4839548)	+	(G)n	Simple_repeat	1	30	(0)	2364729
249	30.0	9.1	0.9	chr20	60589810	60589920	(3854247)	C	LTR89	LTR/ERVL?	(486)	393	273	2366182
897	24.8	1.4	0.0	chr20	61891956	61892165	(2552002)	C	MER58A	DNA/hAT-Charlie	(4)	220	8	2367864
295	32.7	4.8	12.6	chr20	61892295	61892588	(2551579)	C	L2b	LINE/L2	(3)	3372	3103	2367865
22	22.4	3.9	2.5	chr20	61952051	61952127	(2492040)	+	(GCACAC)n	Simple_repeat	1	80	(0)	2367934
16	15.2	2.5	2.4	chr20	62228465	62228504	(2215663)	+	(ACGAGG)n	Simple_repeat	1	41	(0)	2368315
18	34.1	0.0	6.8	chr20	62228684	62228829	(2215338)	+	(TGCGTG)n	Simple_repeat	1	146	(0)	2368316
33	24.9	0.0	3.0	chr20	62938093	62938192	(1505975)	+	(CCCGCC)n	Simple_repeat	1	100	(0)	2369115
43	27.1	2.9	4.7	chr20	63216006	63216212	(1227955)	+	(GGC)n	Simple_repeat	1	213	(0)	2369380
15	16.2	2.2	4.3	chr20	63272498	63272542	(1171625)	+	(CCCCG)n	Simple_repeat	1	46	(0)	2369448
13	19.6	4.0	3.9	chr20	63272867	63272916	(1171251)	+	(GCCCT)n	Simple_repeat	1	52	(0)	2369449
81	21.6	1.4	3.2	chr20	63653429	63653646	(790521)	+	G-rich	Low_complexity	1	221	(0)	2369848
227	33.3	4.0	0.0	chr20	63658709	63658780	(785387)	C	MIRc	SINE/MIR	(109)	159	85	2369859
15	4.1	0.0	6.9	chr20	64063098	64063126	(381041)	+	(GCGG)n	Simple_repeat	1	29	(0)	2370474
12	16.6	0.0	0.0	chr21	17819157	17819183	(28890800)	+	(GTCC)n	Simple_repeat	1	27	(0)	2382241
722	32.2	12.3	0.3	chr21	18368292	18368627	(28341356)	+	MLT1J2	LTR/ERVL-MaLR	6	387	(61)	2382996
12	19.1	5.9	3.7	chr21	26170687	26170737	(20539246)	+	(CCG)n	Simple_repeat	1	54	(0)	2393604
13	21.5	3.4	8.7	chr21	26170896	26170984	(20538999)	+	(GGCCCAC)n	Simple_repeat	1	92	(0)	2393605
752	24.2	8.7	8.7	chr21	26674224	26674499	(20035484)	+	LTR16A1	LTR/ERVL	45	320	(136)	2394325
398	27.6	2.0	4.0	chr21	26674494	26674644	(20035339)	+	LTR33B	LTR/ERVL	55	202	(301)	2394326
234	23.1	0.0	0.0	chr21	26674647	26674685	(20035298)	C	MER50	LTR/ERV1	(23)	711	673	2394327
1544	10.1	0.5	1.0	chr21	26674697	26674903	(20035080)	+	AluSx	SINE/Alu	89	294	(18)	2394328
346	21.7	12.2	0.2	chr21	26686449	26686536	(20023447)	C	MLT1J	LTR/ERVL-MaLR	(319)	193	58	2394343
14	14.0	2.1	8.2	chr21	26844279	26844326	(19865657)	+	(CTTCGT)n	Simple_repeat	1	49	(0)	2394581
265	33.6	3.2	1.6	chr21	27043532	27043655	(19666328)	C	LTR33B	LTR/ERVL	(349)	154	29	2394854
24	15.8	1.7	3.3	chr21	28885363	28885422	(17824561)	+	(CATGCG)n	Simple_repeat	1	61	(0)	2397390
13	8.5	4.0	0.0	chr21	29024590	29024614	(17685369)	+	(GGT)n	Simple_repeat	1	26	(0)	2397622
1820	15.5	0.3	3.8	chr21	31428995	31429310	(15280673)	C	AluJb	SINE/Alu	(7)	305	1	2401317
516	22.8	5.4	10.7	chr21	31429311	31429498	(15280485)	+	L1ME4c	LINE/L1	312	488	(342)	2401316
249	31.4	3.1	0.0	chr21	31429520	31429643	(15280340)	+	LTR33C	LTR/ERVL	12	139	(490)	2401318
33	17.4	1.4	1.4	chr21	31732160	31732232	(14977751)	+	(CGCCC)n	Simple_repeat	1	74	(0)	2401953
12	15.7	2.6	5.0	chr21	31732235	31732273	(14977710)	+	G-rich	Low_complexity	1	40	(0)	2401954
543	28.0	12.9	7.3	chr21	32094945	32095314	(14614669)	+	MLT1J	LTR/ERVL-MaLR	102	495	(17)	2402644
1129	28.3	6.7	2.6	chr21	33014340	33014756	(13695227)	+	MLT1J	LTR/ERVL-MaLR	1	435	(77)	2404164
600	28.9	11.1	3.9	chr21	33968192	33968612	(12741371)	C	MLT1J	LTR/ERVL-MaLR	(19)	429	1	2405907
659	30.0	17.2	1.5	chr21	33994331	33994658	(12715325)	C	MLT1J	LTR/ERVL-MaLR	(52)	460	71	2405957
534	26.6	6.3	2.9	chr21	33994692	33994948	(12715035)	C	L1MEd	LINE/L1	(3435)	2965	2683	2405958
504	24.7	10.0	1.6	chr21	34030010	34030338	(12679645)	C	MLT1J2	LTR/ERVL-MaLR	(22)	426	1	2406026
652	26.4	6.3	4.0	chr21	34030341	34030589	(12679394)	+	MLT1L	LTR/ERVL-MaLR	344	598	(12)	2406027
761	30.0	8.2	4.6	chr21	34061882	34062318	(12647665)	C	MLT1J	LTR/ERVL-MaLR	(39)	473	20	2406086
236	26.1	4.3	7.6	chr21	34062365	34062509	(12647474)	+	MamRep1151	LTR?	329	468	(241)	2406087
15	24.4	2.1	0.0	chr21	36989779	36989826	(9720157)	+	G-rich	Low_complexity	1	49	(0)	2410805
438	29.6	12.3	0.5	chr21	37373429	37373628	(9336355)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	286	2411483
728	26.3	9.5	0.5	chr21	37373660	37373869	(9336114)	C	MLT1J	LTR/ERVL-MaLR	(281)	231	1	2411483
60	22.7	2.3	5.4	chr21	38805637	38805854	(7904129)	+	(CCCCT)n	Simple_repeat	1	223	(0)	2413543
28	3.3	0.0	0.0	chr21	38805860	38805890	(7904093)	+	(TCCCTCC)n	Simple_repeat	1	31	(0)	2413544
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
15	16.9	6.1	1.9	chr21	41766800	41766848	(4943135)	+	(CCCCAG)n	Simple_repeat	1	52	(0)	2417971
13	22.5	0.0	4.4	chr21	42573304	42573348	(4136635)	+	(CCCTT)n	Simple_repeat	1	45	(0)	2419045
1966	12.3	0.3	3.9	chr21	43659016	43659324	(3050659)	+	AluJr	SINE/Alu	1	298	(14)	2420579
13	0.0	0.0	4.8	chr21	43659537	43659557	(3050426)	+	(CCG)n	Simple_repeat	1	21	(0)	2420580
11	21.8	2.2	4.3	chr21	44801596	44801641	(1908342)	+	(GCCCCA)n	Simple_repeat	1	47	(0)	2422172
20	15.3	9.0	1.4	chr21	44873425	44873491	(1836492)	+	(ACCCCG)n	Simple_repeat	1	73	(0)	2422271
318	31.1	5.6	7.9	chr21	45327196	45327608	(1382375)	C	L2a	LINE/L2	(18)	3408	2954	2422746
225	31.5	5.3	2.7	chr21	46323406	46323552	(386431)	C	MER4E	LTR/ERV1	(153)	613	463	2423810
235	22.1	3.4	5.5	chr21	46323663	46323753	(386230)	+	LTR16A	LTR/ERVL	135	223	(228)	2423811
37	23.7	3.5	3.4	chr21	46324510	46324674	(385309)	+	G-rich	Low_complexity	1	165	(0)	2423812
15	12.2	0.0	0.0	chr22	17120321	17120347	(33698121)	+	(GTG)n	Simple_repeat	1	27	(0)	2428248
15	20.1	0.0	0.0	chr22	17120597	17120630	(33697838)	+	(GCA)n	Simple_repeat	1	34	(0)	2428249
22	23.9	0.0	0.0	chr22	17120740	17120793	(33697675)	+	GA-rich	Low_complexity	1	54	(0)	2428250
204	18.6	4.5	2.3	chr22	17580632	17580675	(33237793)	C	MIRb	SINE/MIR	(192)	76	32	2429287
19	24.2	3.6	3.5	chr22	17580951	17581033	(33237435)	+	(TGCCCC)n	Simple_repeat	1	86	(0)	2429288
203	29.8	1.7	0.0	chr22	19174075	19174131	(31644337)	C	MIRb	SINE/MIR	(0)	268	211	2431570
2489	7.0	0.0	0.7	chr22	19596348	19596648	(31221820)	C	AluYm1	SINE/Alu	(12)	299	1	2432287
278	26.8	0.0	0.0	chr22	19596650	19596705	(31221763)	C	MIRb	SINE/MIR	(90)	178	123	2432288
113	29.2	1.3	4.4	chr22	20496137	20496610	(30321858)	+	(TCCC)n	Simple_repeat	1	480	(0)	2433428
249	31.0	0.0	3.9	chr22	21567526	21567629	(29250839)	+	L2b	LINE/L2	3250	3349	(26)	2435437
14	17.6	0.0	0.0	chr22	21629314	21629345	(29189123)	+	(GCACGT)n	Simple_repeat	1	32	(0)	2435563
2282	10.8	0.0	0.0	chr22	23178135	23178430	(27640038)	+	AluSx3	SINE/Alu	1	296	(15)	2437894
184	21.2	0.0	0.0	chr22	23178506	23178538	(27639930)	+	MIR	SINE/MIR	112	144	(118)	2437895
982	28.1	8.5	4.5	chr22	23216574	23217058	(27601410)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	44	2437966
12	21.9	3.5	5.0	chr22	24271090	24271147	(26547321)	+	(CCTGCG)n	Simple_repeat	1	60	(0)	2439768
711	26.7	4.8	5.1	chr22	26970852	26971104	(23847364)	+	MLT1J	LTR/ERVL-MaLR	1	252	(260)	2445608
345	31.0	5.1	3.7	chr22	27228700	27228833	(23589635)	C	MIR	SINE/MIR	(53)	209	74	2446249
632	22.0	1.4	0.7	chr22	27228912	27229053	(23589415)	C	MLT1J	LTR/ERVL-MaLR	(339)	173	31	2446250
21	6.0	2.9	0.0	chr22	27259163	27259198	(23559270)	+	(TGTTTTT)n	Simple_repeat	1	37	(0)	2446314
13	16.6	3.6	7.0	chr22	27259245	27259299	(23559169)	+	(TTCCTT)n	Simple_repeat	1	57	(0)	2446315
1463	12.5	2.6	0.4	chr22	27687656	27687880	(23130588)	C	MER30	DNA/hAT-Charlie	(0)	230	1	2447295
1182	26.9	5.7	2.4	chr22	27688108	27688480	(23129988)	+	MLT1J2	LTR/ERVL-MaLR	63	448	(0)	2447296
390	24.0	1.5	4.4	chr22	28772424	28772573	(22045895)	C	MIR	SINE/MIR	(54)	208	74	2449169
21	27.6	0.0	5.4	chr22	28800218	28800309	(22018159)	+	(CCCAGC)n	Simple_repeat	1	92	(0)	2449228
19	18.5	2.0	1.9	chr22	28800537	28800587	(22017881)	+	(CGCGC)n	Simple_repeat	1	52	(0)	2449229
470	26.1	5.2	3.1	chr22	29157883	29158069	(21660399)	C	MLT1J2	LTR/ERVL-MaLR	(249)	195	1	2449990
559	25.9	14.3	6.6	chr22	29457873	29458116	(21360352)	+	LTR33A	LTR/ERVL	17	282	(238)	2450601
12	12.1	7.9	2.4	chr22	29766978	29767015	(21051453)	+	(TCCTGCG)n	Simple_repeat	1	41	(0)	2451281
16	16.0	7.0	0.0	chr22	30246294	30246336	(20572132)	+	A-rich	Low_complexity	1	46	(0)	2452227
32	8.3	1.9	1.8	chr22	30246390	30246443	(20572025)	+	(GGA)n	Simple_repeat	1	55	(0)	2452228
453	24.8	8.7	0.7	chr22	30356405	30356542	(20461926)	C	MER5A1	DNA/hAT-Charlie	(0)	166	17	2452430
243	30.7	12.6	5.4	chr22	30567997	30568237	(20250231)	C	L2c	LINE/L2	(0)	3387	3127	2452928
506	24.4	0.1	1.7	chr22	30568238	30568382	(20250086)	+	MLT1J1	LTR/ERVL-MaLR	2	140	(308)	2452929
323	20.6	15.7	0.0	chr22	30568513	30568609	(20249859)	+	MLT1J1	LTR/ERVL-MaLR	328	442	(2)	2452929
183	32.6	11.4	4.3	chr22	30568631	30568768	(20249700)	C	L2c	LINE/L2	(320)	3067	2919	2452928
1784	14.8	0.0	9.3	chr22	31048340	31048671	(19769797)	+	AluJo	SINE/Alu	4	304	(8)	2453877
673	20.3	2.1	0.1	chr22	31048672	31048823	(19769645)	C	MLT1J1	LTR/ERVL-MaLR	(250)	198	45	2453876
272	29.9	3.0	8.0	chr22	31347732	31347869	(19470599)	+	MIRc	SINE/MIR	45	175	(93)	2454550
224	31.8	6.0	1.8	chr22	32904005	32904116	(17914352)	C	MIRc	SINE/MIR	(32)	236	120	2457947
1059	25.4	8.7	5.8	chr22	32904134	32904567	(17913901)	+	MLT1J2	LTR/ERVL-MaLR	1	448	(0)	2457948
795	18.4	0.0	0.0	chr22	35444732	35444856	(15373612)	+	AluJr	SINE/Alu	1	125	(187)	2463009
307	31.3	7.3	0.6	chr22	35444866	35445032	(15373436)	+	MLT1J	LTR/ERVL-MaLR	1	179	(333)	2463010
270	25.1	1.9	1.6	chr22	35470783	35470888	(15347580)	C	Kanga1c	DNA/TcMar-Tc2	(67)	114	8	2463087
378	30.3	8.7	7.2	chr22	35470913	35471161	(15347307)	C	MLT1L	LTR/ERVL-MaLR	(180)	430	111	2463088
1915	24.7	4.5	0.2	chr22	35625606	35626088	(15192380)	C	MLT1J	LTR/ERVL-MaLR	(7)	505	1	2463462
378	32.6	9.7	2.2	chr22	35626133	35626361	(15192107)	C	L2c	LINE/L2	(430)	2989	2742	2463460
573	24.7	5.6	0.1	chr22	36410641	36410804	(14407664)	+	MIRc	SINE/MIR	47	210	(52)	2464956
425	26.7	15.4	3.8	chr22	36410816	36411005	(14407463)	+	MIRb	SINE/MIR	1	213	(55)	2464957
755	22.6	6.2	0.0	chr22	36741342	36741509	(14076959)	+	MER58A	DNA/hAT-Charlie	46	224	(0)	2465752
573	22.4	2.4	2.0	chr22	36741532	36741683	(14076785)	C	MLT1G1	LTR/ERVL-MaLR	(251)	193	31	2465746
1836	16.7	0.4	0.4	chr22	36741735	36742010	(14076458)	+	AluJb	SINE/Alu	1	276	(36)	2465753
19	16.6	0.0	5.7	chr22	37051589	37051641	(13766827)	+	G-rich	Low_complexity	1	53	(0)	2466408
1188	28.4	3.9	3.4	chr22	37442540	37443012	(13375456)	+	MLT1J	LTR/ERVL-MaLR	7	448	(0)	2467245
21	22.5	4.5	0.0	chr22	37519123	37519189	(13299279)	+	(CGCCTC)n	Simple_repeat	1	70	(0)	2467416
16	0.0	0.0	0.0	chr22	37746216	37746232	(13072236)	+	(A)n	Simple_repeat	1	17	(0)	2467968
27	8.9	1.9	3.8	chr22	37746284	37746335	(13072133)	+	(CGG)n	Simple_repeat	1	53	(0)	2467969
192	27.4	14.3	1.2	chr22	37802211	37802295	(13016173)	C	MIR	SINE/MIR	(56)	206	109	2468116
2235	6.2	0.4	2.4	chr22	37848993	37849280	(12969188)	C	AluSp	SINE/Alu	(20)	293	12	2468218
224	34.3	9.3	1.4	chr22	38056852	38056990	(12761478)	+	MIR3	SINE/MIR	31	181	(27)	2468715
819	24.3	8.9	2.3	chr22	38166095	38166313	(12652155)	+	MLT1J	LTR/ERVL-MaLR	59	293	(219)	2468937
18	21.6	0.0	5.1	chr22	38166408	38166448	(12652020)	+	A-rich	Low_complexity	1	39	(0)	2468938
15	11.7	0.0	0.0	chr22	38505819	38505846	(12312622)	+	(CTCGC)n	Simple_repeat	1	28	(0)	2469636
942	24.4	6.8	7.7	chr22	38801264	38801574	(12016894)	C	MLT1J	LTR/ERVL-MaLR	(204)	308	1	2470294
452	25.2	7.5	0.0	chr22	38801578	38801688	(12016780)	+	MIRb	SINE/MIR	34	153	(115)	2470295
284	36.7	4.6	4.2	chr22	39455895	39456133	(11362335)	C	L2	LINE/L2	(452)	2967	2728	2471689
887	29.7	13.1	0.9	chr22	39490030	39490480	(11327988)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	6	2471752
13	14.7	3.3	0.0	chr22	39520440	39520469	(11297999)	+	G-rich	Low_complexity	1	31	(0)	2471815
1738	14.2	0.3	1.4	chr22	39953625	39953912	(10864556)	C	AluJr	SINE/Alu	(27)	285	1	2472584
636	19.9	10.9	1.2	chr22	39954190	39954362	(10864106)	C	MLT1L	LTR/ERVL-MaLR	(2)	608	417	2472585
12	12.6	0.0	3.6	chr22	40370878	40370905	(10447563)	+	G-rich	Low_complexity	1	28	(0)	2473431
210	27.4	8.8	0.0	chr22	41204980	41205041	(9613427)	+	L2a	LINE/L2	3357	3424	(2)	2475377
427	23.7	16.6	6.4	chr22	41448756	41448895	(9369573)	+	MIRb	SINE/MIR	56	212	(56)	2475932
439	32.1	2.1	0.0	chr22	42294645	42294784	(8523684)	C	MIRb	SINE/MIR	(37)	231	89	2477744
13	21.6	6.2	0.0	chr22	42519858	42519905	(8298563)	+	(CCCGC)n	Simple_repeat	1	51	(0)	2478260
12	20.5	2.0	5.9	chr22	42582071	42582120	(8236348)	+	(CGCC)n	Simple_repeat	1	51	(0)	2478423
2274	8.5	2.0	0.3	chr22	42857684	42857978	(7960490)	C	AluSx	SINE/Alu	(11)	301	2	2479093
294	32.1	1.9	1.9	chr22	43186558	43186665	(7631803)	+	MIRb	SINE/MIR	116	223	(45)	2479778
12	24.6	3.6	3.5	chr22	43186826	43186881	(7631587)	+	(CCG)n	Simple_repeat	1	58	(0)	2479779
1075	22.0	13.7	3.7	chr22	43187850	43188009	(7630459)	C	BLACKJACK	DNA/hAT-Blackjack	(740)	2229	2079	2479780
1333	19.0	16.4	1.6	chr22	43868171	43868614	(6949854)	C	LTR49	LTR/ERV1	(72)	523	1	2480907
631	19.1	18.7	5.8	chr22	44074948	44075136	(6743332)	C	MER20	DNA/hAT-Charlie	(0)	219	1	2481319
17	31.6	0.0	0.0	chr22	44075214	44075270	(6743198)	+	(ACAC)n	Simple_repeat	1	57	(0)	2481320
1852	23.6	7.4	2.0	chr22	44075314	44075850	(6742618)	C	L1MC1	LINE/L1	(18)	6315	5748	2481321
237	29.7	2.6	0.0	chr22	44342908	44342981	(6475487)	C	MIRc	SINE/MIR	(102)	166	91	2481802
491	32.8	3.0	2.5	chr22	44343031	44343233	(6475235)	+	MIRb	SINE/MIR	43	246	(22)	2481803
187	29.4	12.5	3.8	chr22	45896175	45896305	(4922163)	C	MIR1_Amn	SINE/MIR	(86)	144	1	2484706
265	28.8	1.1	1.3	chr22	45896398	45896487	(4921981)	C	MIRb	SINE/MIR	(99)	169	79	2484707
14	17.6	0.0	4.8	chr22	45896580	45896621	(4921847)	+	GA-rich	Low_complexity	1	42	(0)	2484708
481	32.5	10.9	2.8	chr22	46499273	46499667	(4318801)	+	L1ME3G	LINE/L1	60	424	(500)	2485622
361	27.5	6.5	0.0	chr22	47540093	47540261	(3278207)	+	MLT1J2	LTR/ERVL-MaLR	2	188	(324)	2487004
562	29.5	8.3	3.0	chr22	48682853	48683181	(2135287)	C	Tigger13a	DNA/TcMar-Tigger	(254)	517	170	2488491
1948	20.7	7.6	0.5	chr22	50074672	50075098	(743370)	+	MER66B	LTR/ERV1	27	486	(0)	2490146
262	32.5	13.2	0.0	chr22	50185531	50185727	(632741)	C	MIRc	SINE/MIR	(20)	248	22	2490309
19	4.5	0.0	0.0	chr22	50185744	50185766	(632702)	+	(G)n	Simple_repeat	1	23	(0)	2490310
23	19.0	3.9	3.8	chr22	50185845	50185921	(632547)	+	(CCCGC)n	Simple_repeat	1	80	(0)	2490311
13	13.1	2.7	5.3	chr22	50600509	50600551	(217917)	+	(GCCC)n	Simple_repeat	1	41	(0)	2490937
12	23.6	0.0	0.0	chr3	3126957	3126991	(195168568)	+	(GGCGGC)n	Simple_repeat	1	35	(0)	2496960
1221	30.0	6.9	1.7	chr3	3714411	3714892	(194580667)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	4	2497899
419	30.2	15.3	2.5	chr3	3714893	3715145	(194580414)	+	L1MC5	LINE/L1	6972	7281	(2023)	2497898
13	0.0	4.3	4.2	chr3	4467162	4467184	(193828375)	+	(CAG)n	Simple_repeat	1	24	(0)	2499047
29	17.9	3.8	2.4	chr3	4493401	4493479	(193802080)	+	GA-rich	Low_complexity	1	82	(0)	2499109
21	18.1	5.4	3.9	chr3	9552686	9552759	(188742800)	+	(CGG)n	Simple_repeat	1	78	(0)	2507426
2378	5.1	0.0	7.0	chr3	9663528	9663812	(188631747)	C	AluY	SINE/Alu	(43)	268	1	2507710
2162	8.7	0.7	0.0	chr3	9663814	9664088	(188631471)	C	AluSx	SINE/Alu	(35)	277	1	2507712
394	24.6	7.2	2.7	chr3	9891094	9891239	(188404320)	+	MIRb	SINE/MIR	87	239	(29)	2508189
17	11.7	8.3	1.9	chr3	9915510	9915579	(188379980)	+	(CTGCTCG)n	Simple_repeat	1	74	(0)	2508246
2420	6.9	0.7	0.3	chr3	9986936	9987241	(188308318)	+	AluY	SINE/Alu	3	309	(2)	2508419
323	25.4	12.1	1.4	chr3	10816917	10817056	(187478503)	C	MIRb	SINE/MIR	(14)	254	98	2510176
1646	26.4	9.6	1.3	chr3	11243973	11244441	(187051118)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	1	2511083
287	23.1	0.0	0.0	chr3	11244540	11244591	(187050968)	C	MIRb	SINE/MIR	(10)	258	207	2511084
326	34.8	5.2	12.6	chr3	12724524	12724960	(185570599)	+	L2c	LINE/L2	2092	2494	(925)	2513941
562	28.5	11.2	7.4	chr3	12724999	12725392	(185570167)	+	MLT1J	LTR/ERVL-MaLR	99	509	(3)	2513942
226	33.0	1.5	1.1	chr3	12841955	12842056	(185453503)	C	MIR	SINE/MIR	(52)	216	110	2514226
418	30.7	13.7	0.5	chr3	12973196	12973411	(185322148)	+	L2c	LINE/L2	2917	3165	(222)	2514392
818	6.5	0.0	0.0	chr3	12973639	12973745	(185321814)	+	L1MA3	LINE/L1	6199	6305	(0)	2514393
363	26.0	8.0	5.9	chr3	13461708	13461928	(184833631)	+	MamGypLTR3a	LTR/Gypsy	652	877	(104)	2515297
44	33.0	0.0	0.6	chr3	13698423	13698579	(184596980)	+	(TGTG)n	Simple_repeat	1	157	(0)	2515782
365	22.8	2.5	0.0	chr3	13891826	13891904	(184403655)	+	MLT1J	LTR/ERVL-MaLR	99	179	(333)	2516108
353	36.6	0.6	0.6	chr3	14319501	14319662	(183975897)	C	L2c	LINE/L2	(528)	2891	2730	2516674
1724	21.1	5.3	0.0	chr3	14319721	14320095	(183975464)	+	MLT1J2	LTR/ERVL-MaLR	38	433	(15)	2516677
13	19.3	2.2	4.3	chr3	15206100	15206144	(183089415)	+	(GCCCG)n	Simple_repeat	1	46	(0)	2518367
29	16.4	1.6	1.6	chr3	15332284	15332346	(182963213)	+	(TCC)n	Simple_repeat	1	64	(0)	2518597
23	29.8	2.1	2.0	chr3	15859410	15859506	(182436053)	+	(CGC)n	Simple_repeat	1	99	(0)	2519512
595	22.1	11.0	0.0	chr3	16059053	16059206	(182236353)	+	MIR	SINE/MIR	66	238	(24)	2519860
1524	26.6	8.1	6.2	chr3	16059289	16059937	(182235622)	+	MLT2F	LTR/ERVL	1	663	(0)	2519861
12	23.1	2.0	4.0	chr3	23945800	23945848	(174349711)	+	(GCCCG)n	Simple_repeat	1	50	(0)	2531075
15	9.8	0.0	0.0	chr3	23946025	23946046	(174349513)	+	(GC)n	Simple_repeat	1	22	(0)	2531076
14	14.5	5.0	2.4	chr3	25427867	25427906	(172867653)	+	G-rich	Low_complexity	1	42	(0)	2533305
18	19.6	3.7	1.8	chr3	32106453	32106506	(166189053)	+	G-rich	Low_complexity	1	56	(0)	2543220
465	30.3	9.9	1.6	chr3	32460615	32460936	(165834623)	+	Charlie15b	DNA/hAT-Charlie	705	1056	(5)	2543930
13	12.5	0.0	0.0	chr3	32570224	32570249	(165725310)	+	(GGCGG)n	Simple_repeat	1	26	(0)	2544138
16	11.2	0.0	0.0	chr3	32570308	32570336	(165725223)	+	(GGGGC)n	Simple_repeat	1	29	(0)	2544139
14	17.5	0.0	0.0	chr3	32570815	32570846	(165724713)	+	(GGCGGC)n	Simple_repeat	1	32	(0)	2544140
13	14.8	0.0	3.1	chr3	32570874	32570905	(165724654)	+	G-rich	Low_complexity	1	32	(0)	2544141
24	19.1	3.2	1.5	chr3	33114003	33114065	(165181494)	+	(CCTT)n	Simple_repeat	1	65	(0)	2545324
367	18.9	16.6	4.3	chr3	33128663	33128778	(165166781)	C	L1MC5a	LINE/L1	(2393)	384	252	2545359
566	23.9	6.2	4.0	chr3	33128800	33128973	(165166586)	C	MLT1J2	LTR/ERVL-MaLR	(207)	241	64	2545360
707	29.9	12.5	0.2	chr3	33129003	33129498	(165166061)	C	L1ME1	LINE/L1	(303)	5821	5256	2545347
1258	29.6	15.0	2.8	chr3	33317936	33318672	(164976887)	C	MLT1J2-int	LTR/ERVL-MaLR	(553)	834	1	2545665
623	24.7	1.3	0.7	chr3	33318859	33319009	(164976550)	C	MLT1J2	LTR/ERVL-MaLR	(295)	153	2	2545665
12	19.9	0.0	0.0	chr3	33798625	33798653	(164496906)	+	(CAGC)n	Simple_repeat	1	29	(0)	2546482
949	26.3	10.1	2.1	chr3	34285076	34285448	(164010111)	+	MLT1J1	LTR/ERVL-MaLR	39	444	(0)	2547236
280	26.8	7.6	0.0	chr3	38039699	38039795	(160255764)	C	L2a	LINE/L2	(27)	3399	3295	2552430
246	31.1	4.3	6.9	chr3	39154505	39154649	(159140910)	+	L2c	LINE/L2	3025	3165	(222)	2554045
22	21.4	0.0	4.6	chr3	40309721	40309785	(157985774)	+	(CCT)n	Simple_repeat	1	65	(0)	2555737
1226	26.5	5.3	7.2	chr3	40763866	40764381	(157531178)	+	MLT1J	LTR/ERVL-MaLR	5	510	(2)	2556528
13	10.5	6.5	0.0	chr3	40764430	40764460	(157531099)	+	(ATACAT)n	Simple_repeat	1	33	(0)	2556529
1148	23.0	15.1	4.0	chr3	40853067	40853469	(157442090)	+	LTR16A1	LTR/ERVL	1	456	(0)	2556678
638	26.2	0.7	6.5	chr3	40853631	40853785	(157441774)	C	LTR33A	LTR/ERVL	(374)	146	1	2556679
558	29.2	0.6	3.4	chr3	41417651	41417827	(156877732)	C	MLT1J	LTR/ERVL-MaLR	(251)	261	90	2557445
1464	17.0	11.2	0.7	chr3	41417829	41418124	(156877435)	+	MER34	LTR/ERV1	1	331	(211)	2557446
192	23.8	4.5	0.0	chr3	42655112	42655174	(155640385)	+	MIR3	SINE/MIR	64	129	(79)	2559444
20	32.8	2.8	0.0	chr3	43894415	43894486	(154401073)	+	(GC)n	Simple_repeat	1	74	(0)	2561332
16	16.8	1.9	5.7	chr3	44510513	44510564	(153784995)	+	(CGCCCCG)n	Simple_repeat	1	53	(0)	2562222
57	0.0	0.0	0.0	chr3	44510727	44510777	(153784782)	+	(GGCGGCG)n	Simple_repeat	1	51	(0)	2562223
14	19.1	0.0	2.6	chr3	45388444	45388481	(152907078)	+	(GCCCC)n	Simple_repeat	1	38	(0)	2563751
193	27.6	11.1	1.0	chr3	45593479	45593586	(152701973)	+	MIR	SINE/MIR	40	158	(50)	2564110
378	32.4	6.1	10.0	chr3	46557921	46558160	(151737399)	C	LTR41B	LTR/ERVL	(307)	451	222	2565601
594	25.9	4.0	2.4	chr3	46558184	46558353	(151737206)	C	LTR41B	LTR/ERVL	(584)	174	2	2565601
2102	22.9	3.7	0.6	chr3	46558358	46558849	(151736710)	C	L1MEf	LINE/L1	(5546)	1001	494	2565597
13	22.5	2.0	3.9	chr3	46812591	46812640	(151482919)	+	G-rich	Low_complexity	1	51	(0)	2565967
24	8.7	0.0	0.0	chr3	46976880	46976916	(151318643)	+	(CCCGC)n	Simple_repeat	1	37	(0)	2566209
21	4.2	0.0	0.0	chr3	46976958	46976982	(151318577)	+	(A)n	Simple_repeat	1	25	(0)	2566210
2402	7.7	0.0	0.3	chr3	47512992	47513291	(150782268)	C	AluSx	SINE/Alu	(13)	299	1	2567324
13	24.0	8.0	1.2	chr3	47579032	47579106	(150716453)	+	(GCGCGGC)n	Simple_repeat	1	81	(0)	2567482
12	22.4	0.0	2.6	chr3	47803441	47803478	(150492081)	+	G-rich	Low_complexity	1	38	(0)	2568028
12	16.3	2.8	2.7	chr3	48429210	48429245	(149866314)	+	(GAGCCCC)n	Simple_repeat	1	37	(0)	2569299
13	8.5	0.0	3.7	chr3	48685810	48685836	(149609723)	+	(GGCAG)n	Simple_repeat	1	27	(0)	2569696
17	26.6	5.3	3.0	chr3	48685860	48685954	(149609605)	+	(CGCCG)n	Simple_repeat	1	100	(0)	2569697
14	19.2	2.8	0.0	chr3	48847788	48847823	(149447736)	+	(CCG)n	Simple_repeat	1	37	(0)	2570099
16	0.0	0.0	0.0	chr3	49358241	49358260	(148937299)	+	(GCC)n	Simple_repeat	1	20	(0)	2571164
1478	17.6	3.6	1.8	chr3	49397162	49397491	(148898068)	+	L1MB8	LINE/L1	5838	6173	(5)	2571262
404	24.6	6.0	3.2	chr3	49397539	49397687	(148897872)	+	MLT1J	LTR/ERVL-MaLR	1	178	(334)	2571263
305	26.0	7.4	1.0	chr3	49397688	49397788	(148897771)	C	L2	LINE/L2	(1687)	1732	1625	2571264
763	27.5	13.8	5.1	chr3	49397822	49398078	(148897481)	C	L2	LINE/L2	(1915)	1504	1232	2571264
2065	10.5	0.0	2.3	chr3	49429415	49429719	(148865840)	C	AluSx1	SINE/Alu	(10)	302	5	2571324
19	19.1	1.7	5.0	chr3	49554469	49554527	(148741032)	+	(GCG)n	Simple_repeat	1	60	(0)	2571617
33	5.2	0.0	0.0	chr3	49554659	49554698	(148740861)	+	(CGGCCC)n	Simple_repeat	1	40	(0)	2571618
27	6.1	0.0	0.0	chr3	49554786	49554820	(148740739)	+	(GGCCCC)n	Simple_repeat	1	35	(0)	2571619
47	2.2	0.0	0.0	chr3	49673796	49673842	(148621717)	+	(CTCACG)n	Simple_repeat	1	47	(0)	2571786
13	24.9	3.7	1.8	chr3	49689476	49689529	(148606030)	+	(GCGCGT)n	Simple_repeat	1	56	(0)	2571792
13	28.0	0.0	0.0	chr3	49940171	49940213	(148355346)	+	(CGGAGG)n	Simple_repeat	1	43	(0)	2572263
12	12.0	0.0	6.5	chr3	50236139	50236169	(148059390)	+	(CGCCC)n	Simple_repeat	1	31	(0)	2572805
24	14.4	0.0	6.6	chr3	50236264	50236324	(148059235)	+	G-rich	Low_complexity	1	61	(0)	2572806
14	11.0	0.0	5.9	chr3	50337380	50337417	(147958142)	+	(GCGTGC)n	Simple_repeat	1	35	(0)	2572924
254	23.2	0.0	0.0	chr3	50497264	50497319	(147798240)	C	MIR3	SINE/MIR	(78)	130	75	2573117
2327	11.0	0.0	0.7	chr3	50545421	50545728	(147749831)	C	AluSz	SINE/Alu	(6)	306	1	2573183
33	0.0	0.0	0.0	chr3	51500117	51500152	(146795407)	+	(A)n	Simple_repeat	1	36	(0)	2574462
13	10.3	2.9	5.6	chr3	51955397	51955431	(146340128)	+	G-rich	Low_complexity	1	36	(0)	2575220
14	20.9	5.1	3.2	chr3	51955866	51955924	(146339635)	+	(GCCGC)n	Simple_repeat	1	62	(0)	2575221
280	8.8	0.0	0.0	chr3	52154795	52154828	(146140731)	+	AluSp	SINE/Alu	232	265	(48)	2575490
15	23.3	3.5	6.7	chr3	52278686	52278771	(146016788)	+	G-rich	Low_complexity	1	89	(0)	2575687
19	19.5	2.1	0.0	chr3	52533909	52533955	(145761604)	+	G-rich	Low_complexity	1	48	(0)	2575997
28	27.3	4.0	2.3	chr3	52685752	52685875	(145609684)	+	(GCC)n	Simple_repeat	1	129	(0)	2576290
180	33.0	13.9	2.2	chr3	53846820	53847002	(144448557)	+	MIRb	SINE/MIR	31	238	(30)	2578144
16	12.9	4.3	4.2	chr3	54121890	54121935	(144173624)	+	(GCCCCA)n	Simple_repeat	1	48	(0)	2578600
759	26.1	16.3	4.1	chr3	54206800	54207190	(144088369)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	1	2578741
776	29.9	8.0	3.9	chr3	55461958	55462315	(142833244)	C	MLT1J2	LTR/ERVL-MaLR	(11)	437	64	2580484
432	27.8	3.8	3.8	chr3	55462383	55462539	(142833020)	+	MIRb	SINE/MIR	97	253	(15)	2580485
1029	26.7	8.9	6.7	chr3	56397663	56398156	(141897403)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	7	2582044
349	26.7	5.3	0.0	chr3	56398274	56398363	(141897196)	C	MIR3	SINE/MIR	(31)	177	83	2582045
14	7.2	0.0	8.6	chr3	56468451	56468485	(141827074)	+	G-rich	Low_complexity	1	35	(0)	2582185
13	20.3	3.6	5.2	chr3	57597457	57597512	(140698047)	+	(CGCCTG)n	Simple_repeat	1	58	(0)	2584256
229	29.3	17.6	0.6	chr3	58434127	58434291	(139861268)	C	L3	LINE/CR1	(15)	4084	3886	2586005
341	28.4	8.2	2.2	chr3	58434316	58434452	(139861107)	C	MIR	SINE/MIR	(17)	245	100	2586006
3495	7.1	2.4	0.0	chr3	58434581	58435032	(139860527)	C	LTR2	LTR/ERV1	(0)	463	1	2586007
501	30.0	6.3	6.7	chr3	58642866	58643297	(139652262)	+	L2b	LINE/L2	2946	3375	(0)	2586419
333	38.2	2.1	1.4	chr3	60615614	60615751	(137679808)	C	L2b	LINE/L2	(0)	3375	3237	2589269
337	29.1	9.0	0.7	chr3	60615797	60615938	(137679621)	+	LTR33B	LTR/ERVL	39	193	(310)	2589270
67	0.0	0.0	0.0	chr3	61249934	61249990	(137045569)	+	(AC)n	Simple_repeat	1	57	(0)	2590232
343	28.3	2.9	3.1	chr3	61624122	61624247	(136671312)	+	MIRb	SINE/MIR	2	128	(140)	2590946
383	29.9	12.4	4.5	chr3	61624265	61624530	(136671029)	+	MLT1J	LTR/ERVL-MaLR	28	317	(195)	2590947
591	30.0	11.2	1.0	chr3	61934497	61934809	(136360750)	C	MLT1J	LTR/ERVL-MaLR	(111)	401	53	2591482
202	39.2	1.0	0.0	chr3	61934849	61934945	(136360614)	+	L2b	LINE/L2	3278	3375	(0)	2591483
283	34.6	2.3	4.6	chr3	61935062	61935279	(136360280)	C	L3	LINE/CR1	(291)	3808	3596	2591484
29	0.0	0.0	0.0	chr3	63863798	63863824	(134431735)	+	(GCG)n	Simple_repeat	1	27	(0)	2594807
33	0.0	7.3	0.0	chr3	63863938	63863978	(134431581)	+	(GCC)n	Simple_repeat	1	44	(0)	2594808
682	29.1	12.1	2.5	chr3	64354928	64355358	(133940201)	C	MLT1J	LTR/ERVL-MaLR	(34)	478	1	2595578
183	26.8	2.4	0.0	chr3	65027717	65027757	(133267802)	+	X6A_LINE	LINE/CR1	892	933	(147)	2596781
2620	21.7	5.2	2.4	chr3	67357684	67358344	(130937215)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	1	2600713
646	25.2	9.0	14.8	chr3	67377378	67377660	(130917899)	+	MLT1J1	LTR/ERVL-MaLR	1	261	(183)	2600740
26	23.6	2.7	0.0	chr3	69080384	69080458	(129215101)	+	G-rich	Low_complexity	1	77	(0)	2603415
189	22.0	18.1	0.0	chr3	73883514	73883572	(124411987)	C	MIRb	SINE/MIR	(14)	254	183	2611926
447	28.7	6.9	4.2	chr3	73883663	73883948	(124411611)	+	MLT1J1	LTR/ERVL-MaLR	46	331	(117)	2611927
647	23.6	3.6	2.4	chr3	75242103	75242267	(123053292)	+	MLT1J	LTR/ERVL-MaLR	27	193	(319)	2613901
2637	5.7	0.0	0.0	chr3	75785912	75786212	(122509347)	C	AluSg	SINE/Alu	(9)	301	1	2614703
12	12.0	3.7	0.0	chr3	88149520	88149546	(110146013)	+	(TAATT)n	Simple_repeat	1	28	(0)	2630438
220	30.2	8.5	4.4	chr3	98523167	98523301	(99772258)	C	MIR3	SINE/MIR	(65)	143	3	2639031
14	28.2	0.0	1.9	chr3	98901217	98901273	(99394286)	+	G-rich	Low_complexity	1	55	(0)	2639605
13	16.9	3.0	0.0	chr3	98901541	98901573	(99393986)	+	GA-rich	Low_complexity	1	34	(0)	2639606
11	18.1	2.4	4.8	chr3	105366741	105366781	(92928778)	+	G-rich	Low_complexity	1	42	(0)	2648180
20	28.7	2.8	0.0	chr3	105366924	105366995	(92928564)	+	(CCG)n	Simple_repeat	1	74	(0)	2648181
484	24.6	3.2	0.0	chr3	107394580	107394701	(90900858)	+	LTR67B	LTR/ERVL	1	126	(494)	2650776
965	29.9	10.4	2.1	chr3	107394722	107395100	(90900459)	+	LTR67B	LTR/ERVL	181	594	(26)	2650776
302	22.2	3.1	0.0	chr3	108311819	108311881	(89983678)	C	Tigger13a	DNA/TcMar-Tigger	(573)	198	134	2652108
776	25.4	7.4	7.9	chr3	108311889	108312367	(89983192)	+	LTR33A_	LTR/ERVL	1	522	(9)	2652109
267	23.6	15.3	3.4	chr3	113019839	113019987	(85275572)	+	MER5B	DNA/hAT-Charlie	4	173	(5)	2658589
197	12.9	0.0	0.0	chr3	113020005	113020035	(85275524)	C	MIR3	SINE/MIR	(65)	143	113	2658590
1665	30.0	7.0	4.9	chr3	115964427	115965939	(82329620)	+	L1ME3E	LINE/L1	4017	5560	(682)	2662834
1005	32.6	4.7	4.3	chr3	115965940	115966449	(82329110)	+	MLT1J	LTR/ERVL-MaLR	1	512	(0)	2662835
1558	4.8	0.0	0.0	chr3	119498102	119498269	(78797290)	C	AluSq	SINE/Alu	(14)	299	132	2667686
238	23.9	5.6	1.5	chr3	119579287	119579354	(78716205)	C	MIR	SINE/MIR	(65)	197	127	2667825
1002	28.9	11.4	1.4	chr3	119746402	119746763	(78548796)	C	MLT1J	LTR/ERVL-MaLR	(109)	403	1	2668119
320	34.2	3.5	0.0	chr3	119746764	119746874	(78548685)	C	MIRb	SINE/MIR	(153)	115	1	2668120
13	5.2	0.0	0.0	chr3	120349090	120349109	(77946450)	+	(GCA)n	Simple_repeat	1	20	(0)	2669018
432	25.3	13.8	3.0	chr3	123066692	123066858	(75228701)	+	MIRb	SINE/MIR	67	254	(14)	2673093
721	26.8	4.4	4.6	chr3	124535712	124536187	(73759372)	C	MLT1J	LTR/ERVL-MaLR	(16)	496	3	2675436
2400	10.2	0.0	0.0	chr3	124536197	124536501	(73759058)	C	AluSq2	SINE/Alu	(8)	305	1	2675437
2028	14.5	1.0	0.3	chr3	124887907	124888216	(73407343)	C	AluJo	SINE/Alu	(0)	312	1	2676036
920	24.4	5.9	2.5	chr3	125058998	125059275	(73236284)	C	MLT1J1	LTR/ERVL-MaLR	(153)	291	4	2676364
318	23.8	9.1	0.0	chr3	125059325	125059404	(73236155)	+	MIR3	SINE/MIR	105	192	(16)	2676365
35	10.0	0.0	0.0	chr3	125375248	125375302	(72920257)	+	(CTC)n	Simple_repeat	1	55	(0)	2676882
2288	8.8	1.4	1.4	chr3	125651915	125652210	(72643349)	C	AluSg	SINE/Alu	(14)	296	1	2677493
991	20.3	19.6	0.7	chr3	125652294	125652718	(72642841)	+	MLT2F	LTR/ERVL	1	511	(152)	2677494
487	18.2	9.4	3.4	chr3	125757155	125757340	(72538219)	C	MLT1J1	LTR/ERVL-MaLR	(204)	207	1	2677617
268	28.2	3.9	1.6	chr3	125757349	125757474	(72538085)	C	L1M5	LINE/L1	(3594)	2552	2424	2677616
13	25.5	5.5	2.6	chr3	126356555	126356627	(71938932)	+	(GCGTGT)n	Simple_repeat	1	77	(0)	2678457
599	29.7	11.4	2.5	chr3	126379987	126380440	(71915119)	+	L2a	LINE/L2	2820	3372	(54)	2678493
420	27.6	8.2	0.0	chr3	127158725	127158927	(71136632)	C	L2b	LINE/L2	(196)	3179	2959	2679605
266	29.0	5.2	3.3	chr3	127159045	127159194	(71136365)	+	MIR	SINE/MIR	23	175	(87)	2679606
13	14.1	4.7	4.4	chr3	127590416	127590458	(70705101)	+	(GCCCG)n	Simple_repeat	1	45	(0)	2680325
24	14.0	5.5	0.0	chr3	127629607	127629661	(70665898)	+	(CGTGTG)n	Simple_repeat	1	58	(0)	2680398
535	26.6	6.0	1.9	chr3	127697344	127697504	(70598055)	C	MIR	SINE/MIR	(0)	262	95	2680517
637	24.3	8.0	0.6	chr3	127697505	127697678	(70597881)	+	MLT1J	LTR/ERVL-MaLR	12	199	(313)	2680518
519	29.3	9.6	6.5	chr3	127849413	127849675	(70445884)	C	MLT1J	LTR/ERVL-MaLR	(237)	275	4	2680791
25	23.9	1.9	5.7	chr3	128052314	128052417	(70243142)	+	(GCGGC)n	Simple_repeat	1	106	(0)	2681126
13	12.6	8.9	2.0	chr3	128052382	128052426	(70243133)	+	(CCGCCGCCG)n	Simple_repeat	1	49	(0)	2681127
2506	8.1	13.9	22.3	chr3	128152657	128153231	(70142328)	C	LTR12F	LTR/ERV1	(0)	519	1	2681287
15	17.6	1.7	8.2	chr3	128153460	128153519	(70142040)	+	G-rich	Low_complexity	1	61	(0)	2681288
14	4.0	3.3	6.5	chr3	128153493	128153522	(70142037)	+	(GGC)n	Simple_repeat	1	31	(0)	2681289
194	23.9	4.2	0.0	chr3	128993480	128993525	(69302034)	+	L2b	LINE/L2	3328	3375	(0)	2682835
190	30.8	14.7	5.0	chr3	129026766	129026905	(69268654)	C	L3	LINE/CR1	(601)	3498	3343	2682900
245	27.7	2.6	7.4	chr3	129026923	129027043	(69268516)	C	MLT1L	LTR/ERVL-MaLR	(81)	529	415	2682901
2292	10.6	0.0	0.0	chr3	129399073	129399375	(68896184)	+	AluSx1	SINE/Alu	1	303	(9)	2683665
198	27.3	3.5	0.0	chr3	129399841	129399895	(68895664)	C	MIR	SINE/MIR	(81)	181	125	2683666
411	20.7	8.5	5.3	chr3	129690486	129690638	(68604921)	+	MLT1J1	LTR/ERVL-MaLR	29	182	(229)	2684228
246	30.6	10.9	1.1	chr3	130011963	130012080	(68283479)	+	MIR3	SINE/MIR	57	196	(34)	2684878
245	29.0	3.9	1.6	chr3	130012132	130012257	(68283302)	+	L1M5	LINE/L1	2424	2552	(3594)	2684879
408	22.0	4.9	3.0	chr3	130012299	130012451	(68283108)	+	MLT1J1	LTR/ERVL-MaLR	41	207	(204)	2684880
1007	27.7	6.8	4.7	chr3	130259805	130260232	(68035327)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	11	2685243
11	27.7	0.0	0.0	chr3	132660552	132660590	(65634969)	+	(GGAGCG)n	Simple_repeat	1	39	(0)	2688747
17	21.5	0.0	3.9	chr3	134374582	134374633	(63920926)	+	(CCTCCGC)n	Simple_repeat	1	52	(0)	2691350
50	0.0	0.0	0.0	chr3	136882548	136882590	(61412969)	+	(TG)n	Simple_repeat	1	43	(0)	2695286
741	22.9	3.3	1.7	chr3	136882706	136882883	(61412676)	C	MLT1J2	LTR/ERVL-MaLR	(267)	181	1	2695287
2153	11.8	1.0	1.0	chr3	136882932	136883220	(61412339)	C	AluSz6	SINE/Alu	(23)	289	1	2695288
2323	10.2	0.0	0.0	chr3	138347599	138347891	(59947668)	C	AluSx	SINE/Alu	(18)	294	2	2697378
3853	14.2	2.0	5.9	chr3	138347892	138347941	(59947618)	+	L1MB7	LINE/L1	6117	6161	(23)	2697377
14	20.0	0.0	6.5	chr3	138945502	138945547	(59350012)	+	(GGC)n	Simple_repeat	1	46	(0)	2698569
39	23.6	4.6	4.4	chr3	138945713	138945726	(59349833)	+	(GGC)n	Simple_repeat	1	18	(163)	2698570
13	15.8	2.7	2.6	chr3	138945727	138945763	(59349796)	+	G-rich	Low_complexity	1	38	(0)	2698571
39	23.6	4.6	4.4	chr3	138945764	138945885	(59349674)	+	(GGC)n	Simple_repeat	19	181	(0)	2698570
18	19.4	0.0	0.0	chr3	138946022	138946062	(59349497)	+	(GCAGCT)n	Simple_repeat	1	41	(0)	2698572
541	21.4	10.3	0.7	chr3	140911059	140911199	(57384360)	C	LTR33A	LTR/ERVL	(306)	197	42	2701498
240	25.7	9.1	0.0	chr3	140931043	140931112	(57364447)	+	L1M6	LINE/L1	403	479	(6017)	2701530
1307	24.4	7.8	2.0	chr3	141370088	141370438	(56925121)	C	MLT1J1	LTR/ERVL-MaLR	(8)	436	64	2702204
475	25.6	6.4	8.6	chr3	141646915	141647089	(56648470)	C	LTR33A	LTR/ERVL	(349)	171	1	2702626
17	3.2	2.5	9.8	chr3	142724600	142724639	(55570920)	+	(CCT)n	Simple_repeat	1	41	(0)	2704609
320	23.5	3.8	1.9	chr3	144636852	144636970	(53658589)	+	LTR33B	LTR/ERVL	22	142	(389)	2707323
1946	18.4	16.0	2.1	chr3	149507160	149507692	(48787867)	C	MLT2F	LTR/ERVL	(51)	612	10	2713720
244	27.4	16.7	0.0	chr3	149507872	149507966	(48787593)	+	L2b	LINE/L2	3244	3357	(18)	2713722
1488	17.9	18.4	0.3	chr3	149508109	149508445	(48787114)	+	MER92A	LTR/ERV1	1	412	(0)	2713723
15	12.7	0.0	5.3	chr3	149664420	149664457	(48631102)	+	A-rich	Low_complexity	1	38	(0)	2714005
185	26.2	9.7	3.7	chr3	149752626	149752732	(48542827)	C	L2a	LINE/L2	(6)	3420	3307	2714160
526	26.4	9.2	0.6	chr3	149752742	149752920	(48542639)	C	MIR	SINE/MIR	(3)	259	64	2714161
13	25.1	6.6	0.0	chr3	149970278	149970338	(48325221)	+	(GACCCCC)n	Simple_repeat	1	65	(0)	2714494
13	9.6	0.0	0.0	chr3	149971187	149971209	(48324350)	+	(GCGT)n	Simple_repeat	1	23	(0)	2714496
4814	9.5	4.7	1.8	chr3	150322786	150323774	(47971785)	+	LTR12C	LTR/ERV1	1	1579	(0)	2715045
1201	30.7	7.0	0.7	chr3	150323911	150324349	(47971210)	+	LTR33A	LTR/ERVL	52	520	(0)	2715046
30	24.7	1.2	0.0	chr3	150408250	150408330	(47887229)	+	(CGG)n	Simple_repeat	1	82	(0)	2715186
14	27.2	1.6	3.2	chr3	150408713	150408773	(47886786)	+	(CCGC)n	Simple_repeat	1	62	(0)	2715187
75	8.3	0.0	0.0	chr3	150703722	150703823	(47591736)	+	(CTC)n	Simple_repeat	1	102	(0)	2715698
13	17.2	3.9	5.7	chr3	150762949	150762999	(47532560)	+	(CGCCCGG)n	Simple_repeat	1	53	(0)	2715807
675	26.5	7.5	4.9	chr3	156131811	156132096	(42163463)	C	MLT1J1	LTR/ERVL-MaLR	(150)	294	1	2723621
189	30.6	5.6	2.3	chr3	156555580	156555666	(41739893)	C	MIR	SINE/MIR	(55)	207	118	2724196
12	23.4	4.6	4.4	chr3	156816720	156816784	(41478775)	+	G-rich	Low_complexity	1	68	(0)	2724605
18	16.6	1.6	7.8	chr3	156817017	156817079	(41478480)	+	(GCG)n	Simple_repeat	1	64	(0)	2724606
227	29.2	0.0	5.7	chr3	157914785	157914872	(40380687)	+	MIR3	SINE/MIR	78	159	(103)	2726118
1343	27.5	3.2	4.9	chr3	157914976	157915445	(40380114)	+	MLT1J	LTR/ERVL-MaLR	27	488	(24)	2726119
206	28.6	3.4	11.1	chr3	158570816	158570941	(39724618)	C	MIR3	SINE/MIR	(8)	200	85	2726981
12	19.8	2.3	4.4	chr3	158732338	158732381	(39563178)	+	G-rich	Low_complexity	1	45	(0)	2727205
682	23.7	22.1	5.7	chr3	158735539	158735932	(39559627)	C	MLT1J	LTR/ERVL-MaLR	(9)	503	43	2727213
821	26.3	12.6	2.9	chr3	158735937	158736353	(39559206)	C	LTR16A2	LTR/ERVL	(0)	456	27	2727214
832	24.3	10.1	3.8	chr3	159058984	159059399	(39236160)	+	MLT1J2	LTR/ERVL-MaLR	3	444	(0)	2727683
217	32.1	14.2	0.0	chr3	160210597	160210705	(38084854)	C	MIRb	SINE/MIR	(122)	146	20	2729464
722	27.1	12.7	10.8	chr3	160210792	160211246	(38084313)	+	MLT1J	LTR/ERVL-MaLR	43	507	(5)	2729465
228	28.5	12.3	4.2	chr3	166878083	166878298	(31417261)	C	LTR67B	LTR/ERVL	(312)	308	73	2738036
37	0.0	0.0	0.0	chr3	168096250	168096281	(30199278)	+	(GT)n	Simple_repeat	1	32	(0)	2739595
27	17.6	0.0	4.5	chr3	169266871	169266936	(29028623)	+	A-rich	Low_complexity	1	66	(0)	2741137
609	28.1	14.1	5.0	chr3	169266939	169267297	(29028262)	+	MLT1J	LTR/ERVL-MaLR	103	499	(13)	2741138
28	20.9	1.3	2.6	chr3	170357707	170357805	(27937754)	+	(GGC)n	Simple_repeat	1	97	(0)	2742891
18	16.0	0.0	0.0	chr3	170908597	170908631	(27386928)	+	(GCG)n	Simple_repeat	1	35	(0)	2743786
26	17.6	0.0	3.3	chr3	172039625	172039685	(26255874)	+	(GCG)n	Simple_repeat	1	61	(0)	2745520
14	20.6	2.6	0.0	chr3	179451212	179451250	(18844309)	+	(CCCGC)n	Simple_repeat	1	40	(0)	2756238
35	23.2	3.9	5.0	chr3	179451502	179451656	(18843903)	+	(CGCGGCG)n	Simple_repeat	1	161	(0)	2756239
379	29.2	2.3	5.0	chr3	179527447	179527626	(18767933)	C	MIR	SINE/MIR	(0)	262	88	2756375
23	16.7	7.3	4.8	chr3	179653052	179653169	(18642390)	+	(GCCCGCT)n	Simple_repeat	1	120	(0)	2756626
9311	11.4	3.9	13.6	chr3	179774288	179776042	(18519517)	C	LTR12C	LTR/ERV1	(0)	1579	2	2756860
2242	18.2	3.0	2.4	chr3	179776043	179776119	(18519440)	C	MSTB	LTR/ERVL-MaLR	(349)	77	1	2756859
21	12.2	2.0	4.0	chr3	180912587	180912635	(17382924)	+	(CCCCTCC)n	Simple_repeat	1	50	(0)	2758546
2245	12.4	0.0	0.0	chr3	183497132	183497430	(14798129)	+	AluSx	SINE/Alu	3	301	(11)	2762774
639	20.4	18.8	8.3	chr3	183497447	183497836	(14797723)	+	MLT1J1	LTR/ERVL-MaLR	1	440	(8)	2762775
193	33.1	4.4	4.4	chr3	184133940	184134075	(14161484)	C	L3b	LINE/CR1	(242)	4990	4855	2764087
329	27.1	19.2	3.5	chr3	184134641	184134853	(14160706)	+	MIRb	SINE/MIR	10	267	(1)	2764088
31	0.0	0.0	0.0	chr3	184174586	184174619	(14120940)	+	(A)n	Simple_repeat	1	34	(0)	2764151
300	34.7	6.6	2.4	chr3	184249013	184249208	(14046351)	+	L2c	LINE/L2	3147	3360	(27)	2764293
21	27.2	1.0	5.8	chr3	185825421	185825523	(12470036)	+	(GCCCGG)n	Simple_repeat	1	104	(0)	2767154
561	16.2	1.9	0.0	chr3	188701572	188701676	(9593883)	C	MLT1J2	LTR/ERVL-MaLR	(339)	109	3	2772341
32	0.0	2.6	2.6	chr3	194270211	194270248	(4025311)	+	(TTTGTT)n	Simple_repeat	1	39	(0)	2780854
2136	8.0	0.4	2.8	chr3	194270250	194270536	(4025023)	C	AluSq	SINE/Alu	(28)	285	6	2780855
610	28.2	13.2	1.8	chr3	194333041	194333440	(3962119)	C	MER20B	DNA/hAT-Charlie	(10)	773	321	2780947
2030	7.7	3.7	0.0	chr3	194583529	194583814	(3711745)	+	AluSx4	SINE/Alu	1	297	(13)	2781439
23	8.0	5.0	0.0	chr3	194583890	194583929	(3711630)	+	(CGG)n	Simple_repeat	1	42	(0)	2781440
304	32.6	2.0	5.8	chr3	195748228	195748283	(2547276)	+	MIRb	SINE/MIR	1	50	(218)	2783592
2297	9.7	0.3	0.0	chr3	195748284	195748583	(2546976)	+	AluSx	SINE/Alu	3	303	(9)	2783593
304	30.7	11.6	1.7	chr3	195748584	195748762	(2546797)	+	MIRb	SINE/MIR	45	243	(19)	2783592
2850	25.6	6.9	3.0	chr3	196408539	196409643	(1885916)	C	L1MEd	LINE/L1	(5422)	1664	513	2784942
14	0.0	0.0	0.0	chr3	196432404	196432421	(1863138)	+	(CCG)n	Simple_repeat	1	18	(0)	2784995
13	12.5	0.0	0.0	chr3	196739832	196739857	(1555702)	+	(GCCCC)n	Simple_repeat	1	26	(0)	2785665
17	9.7	0.0	5.4	chr3	196740031	196740067	(1555492)	+	(TCCCC)n	Simple_repeat	1	37	(0)	2785666
12	17.5	3.1	0.0	chr3	197484896	197484927	(810632)	+	(CTGTCT)n	Simple_repeat	1	33	(0)	2786995
1384	23.5	9.7	3.0	chr3	197501407	197501876	(793683)	C	MLT1J	LTR/ERVL-MaLR	(4)	508	4	2787030
14	10.7	0.0	5.9	chr3	197501990	197502023	(793536)	+	(CTGGAA)n	Simple_repeat	1	34	(0)	2787031
977	10.6	0.8	0.0	chr3	197747389	197747520	(548039)	C	FLAM_C	SINE/Alu	(10)	133	1	2787457
12	11.6	3.3	3.2	chr4	107662	107691	(190106864)	+	(TCC)n	Simple_repeat	1	31	(0)	2788642
13	18.4	5.3	0.0	chr4	825597	825634	(189388921)	+	GA-rich	Low_complexity	1	40	(0)	2789580
50	19.9	0.5	8.7	chr4	1113964	1114147	(189100408)	+	G-rich	Low_complexity	1	185	(0)	2789880
198	30.0	4.8	0.0	chr4	1622985	1623064	(188591491)	C	MIR	SINE/MIR	(111)	151	68	2790380
14	13.7	4.5	4.3	chr4	1785240	1785283	(188429272)	+	(GGAGCAG)n	Simple_repeat	1	46	(0)	2790597
15	11.7	10.2	1.9	chr4	2242081	2242129	(187972426)	+	(GCCTCGCGC)n	Simple_repeat	1	54	(0)	2791310
22	17.2	1.3	7.8	chr4	2242305	2242380	(187972175)	+	(GCAGG)n	Simple_repeat	1	77	(0)	2791311
13	26.1	0.0	0.0	chr4	2536551	2536591	(187677964)	+	G-rich	Low_complexity	1	41	(0)	2791757
24	25.1	4.9	1.9	chr4	2792973	2793074	(187421481)	+	G-rich	Low_complexity	1	107	(0)	2792250
13	12.7	0.0	0.0	chr4	2934848	2934873	(187279682)	+	(GCCAC)n	Simple_repeat	1	26	(0)	2792456
343	30.1	12.9	2.1	chr4	2935272	2935512	(187279043)	C	MLT2F	LTR/ERVL	(89)	574	304	2792457
19	22.9	0.0	0.0	chr4	2963881	2963926	(187250629)	+	(GCG)n	Simple_repeat	1	46	(0)	2792483
18	20.3	3.9	0.0	chr4	3074605	3074655	(187139900)	+	(GCCGCC)n	Simple_repeat	1	53	(0)	2792718
67	1.6	0.0	0.0	chr4	3074877	3074940	(187139615)	+	(CAG)n	Simple_repeat	1	64	(0)	2792719
54	20.4	0.0	0.0	chr4	3074941	3075052	(187139503)	+	(CGC)n	Simple_repeat	1	112	(0)	2792720
1189	18.5	3.6	0.0	chr4	3756242	3756452	(186458103)	+	MER20	DNA/hAT-Charlie	1	219	(0)	2793566
517	25.2	1.9	1.9	chr4	3756467	3756624	(186457931)	+	MLT1J	LTR/ERVL-MaLR	68	225	(287)	2793567
78	20.7	7.3	1.4	chr4	3870890	3871162	(186343393)	+	(CAGAGA)n	Simple_repeat	1	293	(0)	2793742
22	23.9	7.6	2.4	chr4	3871844	3871961	(186342594)	+	(GGCGAG)n	Simple_repeat	1	127	(0)	2793743
438	24.4	18.6	0.6	chr4	4805741	4805921	(185408634)	C	L2a	LINE/L2	(0)	3426	3206	2795502
838	25.5	8.3	6.5	chr4	4805929	4806281	(185408274)	+	LTR67B	LTR/ERVL	13	372	(248)	2795503
465	21.7	3.2	0.0	chr4	5043740	5043831	(185170724)	C	MLT1J	LTR/ERVL-MaLR	(322)	190	96	2795923
237	31.5	0.0	1.4	chr4	5043844	5043917	(185170638)	+	L2b	LINE/L2	3303	3375	(0)	2795924
244	30.9	11.3	0.0	chr4	5044009	5044102	(185170453)	C	MIR	SINE/MIR	(3)	259	154	2795925
208	32.2	0.0	0.0	chr4	5890882	5890967	(184323588)	C	MIR1_Amn	SINE/MIR	(83)	185	100	2797367
52	2.1	0.0	0.0	chr4	5891165	5891213	(184323342)	+	(CA)n	Simple_repeat	1	49	(0)	2797368
14	32.0	0.0	0.0	chr4	5981070	5981120	(184233435)	+	(ACAC)n	Simple_repeat	1	51	(0)	2797544
329	31.5	0.0	4.3	chr4	6372898	6372981	(183841574)	+	MIR	SINE/MIR	73	154	(108)	2798251
485	28.8	17.7	8.0	chr4	6372982	6373381	(183841174)	+	MLT1J2	LTR/ERVL-MaLR	1	447	(1)	2798252
583	25.7	5.3	6.4	chr4	6461326	6461712	(183752843)	+	MLT1I	LTR/ERVL-MaLR	1	380	(31)	2798415
621	28.1	3.6	8.7	chr4	6582942	6583296	(183631259)	C	MLT1J2	LTR/ERVL-MaLR	(50)	398	63	2798662
552	25.7	0.6	6.4	chr4	6583297	6583483	(183631072)	C	MLT1J	LTR/ERVL-MaLR	(334)	178	3	2798663
4547	11.5	4.2	0.7	chr4	6583545	6584217	(183630338)	C	MER50B	LTR/ERV1	(0)	697	1	2798664
12	32.4	0.0	0.0	chr4	6673912	6673958	(183540597)	+	(GCGT)n	Simple_repeat	1	47	(0)	2798853
1606	13.8	9.9	0.4	chr4	6887548	6887822	(183326733)	C	AluJb	SINE/Alu	(8)	304	1	2799252
2691	14.3	5.4	2.2	chr4	6887823	6887957	(183326598)	C	MER4C	LTR/ERV1	(332)	133	1	2799251
523	24.3	4.0	4.0	chr4	7073491	7073666	(183140889)	C	MLT1J	LTR/ERVL-MaLR	(32)	480	305	2799549
590	19.2	8.5	1.9	chr4	7073736	7073889	(183140666)	C	MLT1J	LTR/ERVL-MaLR	(335)	177	13	2799549
686	25.4	6.1	6.1	chr4	7419819	7420211	(182794344)	C	MLT1J2	LTR/ERVL-MaLR	(7)	441	8	2800122
444	23.8	17.6	2.0	chr4	7420217	7420410	(182794145)	+	MIRb	SINE/MIR	6	231	(37)	2800123
224	30.9	5.2	8.1	chr4	8159160	8159378	(182055177)	C	MIR3	SINE/MIR	(5)	225	7	2801329
548	23.5	9.1	5.2	chr4	8853336	8853568	(181360987)	C	MLT1J	LTR/ERVL-MaLR	(236)	276	34	2802371
2354	8.6	0.0	0.3	chr4	8853570	8853861	(181360694)	+	AluSq	SINE/Alu	1	291	(22)	2802372
552	26.9	19.1	5.5	chr4	9522789	9523170	(180691385)	C	MLT1J2	LTR/ERVL-MaLR	(2)	446	1	2803140
496	29.4	8.1	5.9	chr4	9523171	9523304	(180691251)	C	L1M5	LINE/L1	(3588)	2558	2424	2803139
237	31.1	11.1	1.1	chr4	9523356	9523473	(180691082)	C	MIR3	SINE/MIR	(34)	196	57	2803141
187	26.9	10.8	8.7	chr4	9941613	9941738	(180272817)	+	MIR1_Amn	SINE/MIR	1	129	(101)	2803945
192	32.2	1.7	0.0	chr4	9941738	9941796	(180272759)	+	MIRb	SINE/MIR	170	229	(39)	2803946
715	27.0	8.2	3.7	chr4	15370314	15370582	(174843973)	C	LTR33B	LTR/ERVL	(211)	292	11	2812533
15	20.3	0.0	8.3	chr4	17781784	17781843	(172432712)	+	(GGACAG)n	Simple_repeat	1	60	(0)	2816919
13	28.4	0.0	2.0	chr4	24584229	24584277	(165630278)	+	(CCCGG)n	Simple_repeat	1	49	(0)	2827350
22	27.2	1.4	2.8	chr4	24584565	24584635	(165629920)	+	(GC)n	Simple_repeat	1	72	(0)	2827351
17	4.0	3.9	0.0	chr4	25233912	25233937	(164980618)	+	(GCC)n	Simple_repeat	1	27	(0)	2828550
14	15.9	0.0	0.0	chr4	25234217	25234244	(164980311)	+	GA-rich	Low_complexity	1	28	(0)	2828551
229	36.1	8.3	2.4	chr4	25312423	25312547	(164902008)	C	MamRTE1	LINE/RTE-BovB	(124)	3688	3556	2828691
1218	24.8	4.9	4.9	chr4	26124916	26125241	(164089314)	C	MLT1J	LTR/ERVL-MaLR	(112)	400	75	2830421
556	27.6	3.3	2.0	chr4	26263327	26263474	(163951081)	C	MLT1J2	LTR/ERVL-MaLR	(298)	150	1	2830718
226	29.4	3.7	1.4	chr4	26263495	26263570	(163950985)	+	L2c	LINE/L2	3218	3314	(73)	2830717
326	31.6	14.2	2.4	chr4	26533610	26533820	(163680735)	+	LTR78	LTR/ERV1	549	788	(516)	2831239
836	24.9	11.9	6.3	chr4	26533861	26534238	(163680317)	+	MLT1J2	LTR/ERVL-MaLR	47	448	(0)	2831240
1157	27.0	14.0	3.7	chr4	36264365	36264911	(153949644)	C	MLT2E	LTR/ERVL	(0)	628	25	2844516
298	24.3	15.3	0.0	chr4	36264963	36265073	(153949482)	+	MIRb	SINE/MIR	138	268	(0)	2844517
411	15.7	9.9	2.4	chr4	37762757	37762870	(152451685)	+	MLT1J	LTR/ERVL-MaLR	58	158	(286)	2846641
2486	14.8	3.0	0.0	chr4	38470588	38470971	(151743584)	+	MER57B2	LTR/ERV1	8	403	(0)	2847835
1192	25.3	12.0	1.6	chr4	38470986	38471256	(151743299)	+	MLT1J2	LTR/ERVL-MaLR	1	273	(175)	2847836
2160	12.2	1.4	0.7	chr4	38471257	38471543	(151743012)	+	AluSq	SINE/Alu	1	289	(24)	2847837
584	27.6	10.8	6.1	chr4	40292331	40292795	(149921760)	C	MLT1J	LTR/ERVL-MaLR	(0)	448	20	2851693
196	18.9	0.0	0.0	chr4	41844366	41844402	(148370153)	C	MIRb	SINE/MIR	(74)	194	158	2854715
1538	22.6	10.3	4.7	chr4	41844404	41844876	(148369679)	+	MLT1J	LTR/ERVL-MaLR	6	508	(4)	2854716
8138	23.3	5.0	2.8	chr4	46647509	46651853	(143562702)	+	L1PA15-16	LINE/L1	1412	5908	(1657)	2861106
543	31.6	9.0	2.2	chr4	47711250	47711695	(142502860)	+	MLT1J	LTR/ERVL-MaLR	1	479	(33)	2862661
193	27.8	2.7	0.0	chr4	48907160	48907231	(141307324)	C	MIRb	SINE/MIR	(194)	74	1	2864610
337	27.6	3.8	2.1	chr4	52750674	52750824	(137463731)	C	MER74B	LTR/ERVL	(74)	548	292	2866700
761	24.9	10.6	19.1	chr4	52780698	52781188	(137433367)	+	MLT1J2	LTR/ERVL-MaLR	3	446	(2)	2866752
1024	30.2	5.8	2.9	chr4	53184134	53184583	(137029972)	+	MLT1J	LTR/ERVL-MaLR	8	471	(41)	2867357
643	28.0	10.1	6.7	chr4	54735790	54736191	(135478364)	C	MLT1J	LTR/ERVL-MaLR	(91)	421	5	2869806
189	33.8	4.2	0.0	chr4	54736207	54736274	(135478281)	C	MIR	SINE/MIR	(190)	72	2	2869805
204	24.0	7.4	6.2	chr4	54736275	54736377	(135478178)	+	MIRc	SINE/MIR	124	228	(40)	2869807
301	26.3	13.1	0.5	chr4	55125001	55125148	(135089407)	+	MIR3	SINE/MIR	39	200	(8)	2870380
1022	26.9	14.5	4.4	chr4	55386126	55386583	(134827972)	+	MLT1J	LTR/ERVL-MaLR	1	512	(0)	2870803
706	29.2	1.3	3.7	chr4	55386584	55386756	(134827799)	+	MER102b	DNA/hAT-Charlie	72	244	(97)	2870801
12	30.2	5.8	0.0	chr4	55396377	55396445	(134818110)	+	G-rich	Low_complexity	1	73	(0)	2870819
14	16.2	4.7	2.2	chr4	55546253	55546295	(134668260)	+	(CCGCC)n	Simple_repeat	1	45	(0)	2871090
2538	5.2	0.7	0.3	chr4	56977902	56978210	(133236345)	+	AluY	SINE/Alu	1	310	(1)	2873751
17	18.4	0.0	0.0	chr4	61200700	61200730	(129013825)	+	(GT)n	Simple_repeat	1	31	(0)	2879117
25079	5.8	0.6	1.1	chr4	61754619	61760805	(128453750)	C	L1PA4	LINE/L1	(0)	6155	1	2879842
401	26.1	3.0	0.0	chr4	68373776	68373905	(121840650)	C	LTR67B	LTR/ERVL	(455)	165	32	2888265
33	23.1	1.9	3.6	chr4	70688885	70688992	(119525563)	+	GA-rich	Low_complexity	1	110	(0)	2890981
25	22.1	6.3	4.4	chr4	76949773	76949899	(113264656)	+	(AGCCGG)n	Simple_repeat	1	135	(0)	2900137
621	31.1	6.4	8.3	chr4	78653508	78653955	(111560600)	C	MLT1J	LTR/ERVL-MaLR	(10)	502	64	2902487
277	16.9	2.5	0.0	chr4	78653989	78654065	(111560490)	+	Charlie22a	DNA/hAT-Charlie	101	179	(312)	2902488
392	27.3	2.0	0.0	chr4	80434284	80434382	(109780173)	+	MLT1J	LTR/ERVL-MaLR	29	129	(383)	2904819
274	24.7	4.7	0.0	chr4	83599139	83599219	(106615336)	C	MLT1J	LTR/ERVL-MaLR	(4)	508	424	2909864
926	26.5	5.3	1.9	chr4	83599248	83599555	(106615000)	C	MLT1J	LTR/ERVL-MaLR	(163)	349	31	2909864
1287	7.6	0.0	0.0	chr4	84195786	84195943	(106018612)	+	AluYc	SINE/Alu	142	299	(0)	2910803
450	24.2	1.3	0.3	chr4	84196035	84196162	(106018393)	C	MLT1J1	LTR/ERVL-MaLR	(325)	187	64	2910802
787	31.9	6.2	3.3	chr4	84994201	84994560	(105219995)	C	LTR67B	LTR/ERVL	(15)	605	235	2911946
355	18.8	1.4	0.0	chr4	84994585	84994653	(105219902)	C	LTR67B	LTR/ERVL	(484)	136	67	2911946
419	6.7	9.1	0.0	chr4	84994654	84994713	(105219842)	C	MER30	DNA/hAT-Charlie	(0)	230	165	2911947
304	33.9	8.4	0.0	chr4	86391579	86391687	(103822868)	+	L3	LINE/CR1	3939	4057	(42)	2913771
349	31.2	15.7	6.0	chr4	86391790	86392156	(103822399)	+	MLT1K	LTR/ERVL-MaLR	16	415	(180)	2913772
13	12.2	3.7	0.0	chr4	86935280	86935306	(103279249)	+	(CCG)n	Simple_repeat	1	28	(0)	2914647
1921	17.6	0.3	0.7	chr4	87422068	87422369	(102792186)	+	AluJb	SINE/Alu	1	301	(11)	2915482
362	31.9	4.0	13.1	chr4	88573990	88574325	(101640230)	+	L1M6	LINE/L1	348	651	(5845)	2917391
3075	14.7	3.5	1.2	chr4	88574407	88574972	(101639583)	C	L1MB3	LINE/L1	(2)	6181	5603	2917392
3746	8.2	2.4	0.2	chr4	91624092	91624618	(98589937)	+	HERVH-int	LTR/ERV1	1	539	(7174)	2921367
16523	10.0	1.9	4.3	chr4	91624619	91627498	(98587057)	+	HERVH-int	LTR/ERV1	246	2995	(4718)	2921368
5174	21.5	4.4	2.9	chr4	92254187	92255466	(97959089)	C	L1P3b	LINE/L1	(5141)	1320	8	2922046
3302	27.6	5.5	5.6	chr4	92255532	92257526	(97957029)	C	L1M2	LINE/L1	(4787)	2062	10	2922047
20	3.7	0.0	0.0	chr4	92305517	92305544	(97909011)	+	(CGCCT)n	Simple_repeat	1	28	(0)	2922096
952	19.3	4.7	5.8	chr4	93203799	93204057	(97010498)	C	MLT1J2	LTR/ERVL-MaLR	(188)	256	1	2923322
458	30.8	5.1	0.0	chr4	96342883	96343012	(93871543)	+	MLT1J1	LTR/ERVL-MaLR	26	162	(282)	2927548
2923	15.5	4.2	2.4	chr4	96343014	96343554	(93871001)	+	MER34C_	LTR/ERV1	35	585	(0)	2927549
18	0.0	0.0	0.0	chr4	98929300	98929319	(91285236)	+	(T)n	Simple_repeat	1	20	(0)	2930946
14	20.3	0.0	7.5	chr4	102868954	102869006	(87345549)	+	(GGCC)n	Simple_repeat	1	53	(0)	2936283
14	5.0	0.0	0.0	chr4	104591802	104591822	(85622733)	+	(CAG)n	Simple_repeat	1	21	(0)	2938401
14	24.1	0.0	0.0	chr4	105474285	105474323	(84740232)	+	(CATT)n	Simple_repeat	1	39	(0)	2939523
234	19.1	0.0	0.0	chr4	105474368	105474409	(84740146)	C	L2a	LINE/L2	(22)	3404	3363	2939524
444	26.3	8.2	3.1	chr4	105652026	105652186	(84562369)	C	MLT1J	LTR/ERVL-MaLR	(342)	170	1	2939796
474	26.0	5.2	0.7	chr4	105652187	105652333	(84562222)	+	MIRb	SINE/MIR	115	268	(0)	2939797
51	13.2	2.1	1.0	chr4	107263710	107263804	(82950751)	+	GA-rich	Low_complexity	1	97	(0)	2941851
631	24.1	2.8	0.7	chr4	107263882	107264019	(82950536)	+	MLT2F	LTR/ERVL	1	141	(522)	2941852
1259	27.7	5.3	2.0	chr4	107264048	107264448	(82950107)	+	ERVL-E-int	LTR/ERVL	736	1150	(4517)	2941853
2591	23.5	4.8	2.0	chr4	107264711	107265811	(82948744)	+	ERVL-E-int	LTR/ERVL	1214	2345	(3322)	2941853
437	29.8	0.0	0.7	chr4	107265800	107265941	(82948614)	+	ERVL-B4-int	LTR/ERVL	5567	5707	(7)	2941855
1578	24.6	20.2	1.7	chr4	107265947	107266484	(82948071)	+	MLT2F	LTR/ERVL	1	663	(0)	2941855
925	29.8	10.4	2.4	chr4	109205264	109205731	(81008824)	+	MLT1J	LTR/ERVL-MaLR	1	510	(2)	2944605
13	19.3	0.0	10.2	chr4	109433779	109433789	(80780766)	+	(TCCC)n	Simple_repeat	1	58	(0)	2944950
13	20.3	4.3	2.0	chr4	109433790	109433836	(80780719)	+	(CCTCCCG)n	Simple_repeat	1	49	(0)	2944951
258	18.8	0.0	0.0	chr4	112814095	112814142	(77400413)	C	MLT1J	LTR/ERVL-MaLR	(365)	147	100	2949938
12	21.7	0.0	0.0	chr4	114598686	114598717	(75615838)	+	G-rich	Low_complexity	1	32	(0)	2952251
874	32.1	3.7	5.7	chr4	118683340	118683870	(71530685)	C	LTR33A	LTR/ERVL	(0)	520	1	2957354
181	29.2	11.1	1.4	chr4	124426205	124426277	(65788278)	C	X9_LINE	LINE/L1	(775)	161	81	2965252
464	23.1	2.9	9.5	chr4	124426422	124426569	(65787986)	C	MLT1J1	LTR/ERVL-MaLR	(291)	153	16	2965253
345	36.3	7.4	4.7	chr4	124426668	124426961	(65787594)	+	L2c	LINE/L2	3080	3393	(33)	2965251
13	22.6	0.0	0.0	chr4	125317228	125317263	(64897292)	+	(GCGGAC)n	Simple_repeat	1	36	(0)	2966467
10474	5.7	10.0	0.1	chr4	127963381	127964801	(62249754)	C	LTR12C	LTR/ERV1	(0)	1579	3	2969836
901	26.2	9.5	1.8	chr4	128723426	128723720	(61490835)	C	MLT1J	LTR/ERVL-MaLR	(145)	367	41	2971199
2327	8.6	0.3	0.0	chr4	128723721	128724006	(61490549)	+	AluSp	SINE/Alu	1	287	(26)	2971200
1201	23.9	19.8	2.2	chr4	138037565	138037991	(52176564)	C	MLT2F	LTR/ERVL	(131)	532	1	2982397
520	20.9	1.5	2.3	chr4	138037997	138038128	(52176427)	C	ERVL-B4-int	LTR/ERVL	(6)	5708	5578	2982397
3284	27.1	3.6	1.7	chr4	138038130	138038726	(52175829)	+	L1M4b	LINE/L1	3	617	(6250)	2982399
32	22.3	0.0	1.2	chr4	139084411	139084490	(51130065)	+	(CGGCGG)n	Simple_repeat	1	80	(0)	2983898
13	15.5	11.9	1.5	chr4	140427653	140427711	(49786844)	+	(GCGCGT)n	Simple_repeat	1	66	(0)	2986212
21	16.2	2.0	2.0	chr4	143336127	143336176	(46878379)	+	(CTCC)n	Simple_repeat	1	51	(0)	2990175
12	32.3	0.0	1.8	chr4	143336252	143336307	(46878248)	+	G-rich	Low_complexity	1	56	(0)	2990176
12	13.5	2.8	5.4	chr4	143336362	143336397	(46878158)	+	G-rich	Low_complexity	1	37	(0)	2990176
368	28.5	6.8	0.7	chr4	143477342	143477479	(46737076)	C	LTR33	LTR/ERVL	(368)	147	1	2990362
574	20.0	0.0	1.8	chr4	143477588	143477699	(46736856)	+	LTR67B	LTR/ERVL	17	126	(494)	2990364
290	22.7	1.5	1.5	chr4	143477657	143477723	(46736832)	+	MLT1J	LTR/ERVL-MaLR	98	164	(348)	2990365
14	24.8	3.0	4.3	chr4	145180703	145180769	(45033786)	+	(CGCCGC)n	Simple_repeat	1	69	(0)	2992523
36	2.7	0.0	0.0	chr4	146640089	146640126	(43574429)	+	(CAC)n	Simple_repeat	1	38	(0)	2994605
1629	17.0	0.0	4.0	chr4	148332984	148333260	(41881295)	+	AluSx3	SINE/Alu	1	266	(45)	2996987
767	20.9	2.6	2.6	chr4	148333388	148333539	(41881016)	+	MLT1J	LTR/ERVL-MaLR	61	212	(300)	2996988
225	34.3	1.0	2.9	chr4	148333551	148333655	(41880900)	+	MLT1J	LTR/ERVL-MaLR	328	430	(82)	2996988
13	17.4	4.9	2.3	chr4	151761141	151761181	(38453374)	+	GA-rich	Low_complexity	1	43	(0)	3001943
925	26.1	16.4	4.8	chr4	151994577	151994912	(38219643)	+	MLT1J1	LTR/ERVL-MaLR	60	479	(33)	3002288
597	26.3	6.7	11.9	chr4	152315656	152315847	(37898708)	+	MIR	SINE/MIR	68	257	(5)	3002814
219	21.6	16.1	0.0	chr4	152315866	152315942	(37898613)	C	MIRb	SINE/MIR	(0)	262	175	3002816
1133	19.4	16.2	5.3	chr4	152315989	152316154	(37898401)	+	Arthur1C	DNA/hAT-Tip100	1	183	(180)	3002817
2089	11.5	1.0	4.8	chr4	152316155	152316466	(37898089)	+	AluSx	SINE/Alu	11	310	(2)	3002818
13	4.8	4.5	0.0	chr4	153759975	153759996	(36454559)	+	(GCG)n	Simple_repeat	1	23	(0)	3005152
54	0.0	0.0	0.0	chr4	153789506	153789551	(36425004)	+	(GT)n	Simple_repeat	1	46	(0)	3005188
269	31.4	4.4	0.0	chr4	155854498	155854583	(34359972)	+	L2c	LINE/L2	3041	3130	(257)	3008013
715	25.6	27.7	2.0	chr4	155854637	155855164	(34359391)	+	MLT2F	LTR/ERVL	1	663	(0)	3008014
38	5.0	0.0	0.0	chr4	157220633	157220674	(32993881)	+	(TG)n	Simple_repeat	1	42	(0)	3009823
326	22.1	19.6	0.0	chr4	169010531	169010616	(21203939)	C	MER81	DNA/hAT-Blackjack	(3)	111	5	3025635
232	26.9	0.0	0.0	chr4	169348484	169348535	(20866020)	+	MLT1N2	LTR/ERVL-MaLR	23	74	(488)	3026189
687	30.1	5.4	6.3	chr4	169348613	169349023	(20865532)	+	MLT1N2	LTR/ERVL-MaLR	100	506	(56)	3026189
20	0.0	0.0	0.0	chr4	173370700	173370721	(16843834)	+	(A)n	Simple_repeat	1	22	(0)	3031514
316	30.0	3.5	0.7	chr4	176300403	176300543	(13914012)	C	LTR67B	LTR/ERVL	(48)	572	428	3035355
277	36.0	1.4	1.4	chr4	176300744	176300884	(13913671)	C	MLT1N2	LTR/ERVL-MaLR	(383)	179	39	3035356
2343	8.2	0.0	0.0	chr4	176300946	176301252	(13913303)	C	AluSc5	SINE/Alu	(0)	309	1	3035357
12921	11.8	1.1	7.0	chr4	180468118	180472388	(9742167)	+	L1PA7	LINE/L1	8	3988	(2158)	3040785
1569	23.1	15.6	1.2	chr4	181046741	181047226	(9167329)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	3041574
3332	23.6	8.7	4.9	chr4	181047227	181047956	(9166599)	C	Charlie10	DNA/hAT-Charlie	(558)	2264	1480	3041572
16	0.0	0.0	0.0	chr4	181476207	181476224	(8738331)	+	(T)n	Simple_repeat	1	18	(0)	3042128
15	13.3	7.3	0.0	chr4	183504266	183504306	(6710249)	+	(CGCACGC)n	Simple_repeat	1	44	(0)	3045071
14	3.6	6.7	3.1	chr4	183504426	183504455	(6710100)	+	(CGGAG)n	Simple_repeat	1	32	(0)	3045072
649	28.1	7.6	0.4	chr4	184343855	184344086	(5870469)	C	LTR33A	LTR/ERVL	(267)	264	15	3046410
497	28.3	13.7	8.9	chr4	184537191	184537727	(5676828)	+	L1M6	LINE/L1	43	613	(5883)	3046748
1723	15.4	7.5	0.3	chr4	184537728	184538047	(5676508)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	3046749
15	13.6	0.0	2.9	chr4	184649179	184649212	(5565343)	+	(CCCCGG)n	Simple_repeat	1	34	(0)	3046946
959	25.9	12.7	2.0	chr4	184664379	184664791	(5549764)	C	MLT1J	LTR/ERVL-MaLR	(7)	437	22	3046973
14	9.3	0.0	0.0	chr4	184734032	184734054	(5480501)	+	(GCC)n	Simple_repeat	1	23	(0)	3047089
220	29.6	7.5	0.0	chr4	184734489	184734586	(5479969)	+	MIR3	SINE/MIR	46	151	(57)	3047090
433	31.2	12.7	1.9	chr4	184747348	184747577	(5466978)	C	L2c	LINE/L2	(217)	3170	2912	3047106
514	21.9	9.9	6.4	chr4	184747578	184747694	(5466861)	+	MER5A1	DNA/hAT-Charlie	1	132	(34)	3047107
1862	14.8	3.6	0.3	chr4	184747695	184747985	(5466570)	+	AluJb	SINE/Alu	1	301	(11)	3047108
803	22.9	12.6	11.9	chr4	185062674	185062834	(5151721)	+	MLT1J	LTR/ERVL-MaLR	3	169	(343)	3047608
28	3.3	0.0	0.0	chr4	185062835	185062865	(5151690)	+	(TGTT)n	Simple_repeat	1	31	(0)	3047609
2358	7.5	0.4	0.0	chr4	185062866	185063145	(5151410)	C	AluSp	SINE/Alu	(32)	281	1	3047610
2325	8.9	0.3	0.0	chr4	186571130	186571422	(3643133)	C	AluSc8	SINE/Alu	(16)	295	2	3049864
458	32.3	10.2	6.8	chr4	187826768	187827182	(2387373)	+	LTR33A	LTR/ERVL	4	434	(86)	3051522
662	27.9	29.1	0.2	chr4	189785167	189785628	(428927)	C	LTR67B	LTR/ERVL	(8)	612	10	3054259
17	29.7	0.0	2.9	chr5	53889	53957	(181484302)	+	G-rich	Low_complexity	1	69	(0)	3055018
13	17.9	3.1	0.0	chr5	892658	892689	(180645570)	+	(GGC)n	Simple_repeat	1	33	(0)	3055778
13	28.1	0.0	4.9	chr5	892783	892843	(180645416)	+	(GCCGG)n	Simple_repeat	1	61	(0)	3055779
27	14.6	7.4	2.3	chr5	1246817	1246897	(180291362)	+	(TCCCTCC)n	Simple_repeat	1	87	(0)	3056077
13	21.2	2.6	0.0	chr5	1295520	1295557	(180242702)	+	G-rich	Low_complexity	1	39	(0)	3056108
33	19.2	5.1	5.5	chr5	1523884	1524021	(180014238)	+	G-rich	Low_complexity	1	145	(0)	3056316
16	7.1	3.1	3.0	chr5	2756098	2756129	(178782130)	+	(TCTT)n	Simple_repeat	1	33	(0)	3057614
17	22.8	6.8	1.3	chr5	3595715	3595787	(177942472)	+	(GCGG)n	Simple_repeat	1	78	(0)	3058493
27	8.6	8.0	0.0	chr5	3599151	3599200	(177939059)	+	(TC)n	Simple_repeat	1	54	(0)	3058496
31	14.0	0.0	0.0	chr5	5422615	5422669	(176115590)	+	(GGGGC)n	Simple_repeat	1	55	(0)	3060547
22	22.2	0.0	1.7	chr5	9546081	9546139	(171992120)	+	(GGAGCGG)n	Simple_repeat	1	59	(0)	3065623
28	16.9	6.8	0.0	chr5	9546152	9546224	(171992035)	+	(CCG)n	Simple_repeat	1	78	(0)	3065624
751	26.4	14.5	0.8	chr5	9932901	9933070	(171605189)	+	MLT1J2	LTR/ERVL-MaLR	8	181	(267)	3066132
2110	20.3	4.4	8.1	chr5	9933071	9933611	(171604648)	C	MLT2B1	LTR/ERVL	(0)	520	1	3066133
2493	15.8	11.1	2.9	chr5	10761840	10762394	(170775865)	+	MER4B	LTR/ERV1	1	606	(4)	3067425
11	7.5	6.7	3.1	chr5	13554006	13554035	(167984224)	+	(GCCACA)n	Simple_repeat	1	32	(0)	3070965
16	18.1	4.5	0.0	chr5	13554061	13554104	(167984155)	+	(CAGCGC)n	Simple_repeat	1	46	(0)	3070966
541	31.2	1.1	7.3	chr5	13975451	13975654	(167562605)	+	MamRep38	DNA/hAT	104	294	(1)	3071548
490	27.6	1.7	9.6	chr5	13975687	13975874	(167562385)	+	LTR67B	LTR/ERVL	3	175	(445)	3071549
718	23.1	4.3	4.3	chr5	13975890	13976052	(167562207)	+	FRAM	SINE/Alu	1	163	(3)	3071550
231	29.7	10.3	7.7	chr5	14061021	14061228	(167477031)	C	LTR67B	LTR/ERVL	(2)	618	405	3071709
343	14.6	0.0	6.3	chr5	14061292	14061370	(167476889)	C	MLT1N2	LTR/ERVL-MaLR	(390)	172	91	3071710
2290	8.2	0.0	1.0	chr5	14061439	14061732	(167476527)	+	AluSz6	SINE/Alu	1	291	(21)	3071711
409	15.8	15.2	2.1	chr5	14125248	14125344	(167412915)	C	MLT1J2	LTR/ERVL-MaLR	(23)	425	314	3071823
412	21.1	5.9	3.1	chr5	14125441	14125538	(167412721)	C	MLT1J2	LTR/ERVL-MaLR	(329)	119	19	3071823
867	34.4	4.2	1.8	chr5	15492201	15492594	(166045665)	+	L2a	LINE/L2	2986	3389	(37)	3073635
412	19.4	1.3	0.0	chr5	15492707	15492806	(166045453)	+	MLT1J1	LTR/ERVL-MaLR	63	180	(332)	3073638
391	29.7	3.3	6.4	chr5	15492864	15493050	(166045209)	+	MLT1J1	LTR/ERVL-MaLR	264	444	(4)	3073638
23	20.4	4.3	1.4	chr5	16179074	16179142	(165359117)	+	(GCT)n	Simple_repeat	1	72	(0)	3074628
1972	19.6	5.6	2.5	chr5	17347092	17347540	(164190719)	C	MLT1D	LTR/ERVL-MaLR	(41)	464	1	3076681
274	17.9	3.5	1.8	chr5	17347561	17347617	(164190642)	+	MLT1N2	LTR/ERVL-MaLR	105	162	(400)	3076680
747	17.6	10.8	7.9	chr5	17347593	17347678	(164190581)	+	MER96B	DNA/hAT-Tip100	9	88	(329)	3076682
2152	13.5	0.0	0.0	chr5	17347679	17347975	(164190284)	C	AluSx	SINE/Alu	(15)	297	1	3076683
1301	23.4	1.4	2.4	chr5	28012374	28012667	(153525592)	+	HUERS-P3b-int	LTR/ERV1	244	534	(6884)	3090623
5861	20.7	6.4	2.4	chr5	28012686	28013516	(153524743)	+	HUERS-P3b-int	LTR/ERV1	749	1599	(5819)	3090623
2224	12.5	0.0	0.3	chr5	33206512	33206822	(148331437)	C	AluSx3	SINE/Alu	(0)	311	2	3097971
432	24.2	2.9	2.9	chr5	33206887	33206988	(148331271)	C	LTR33A	LTR/ERVL	(367)	153	52	3097970
708	24.1	0.6	0.6	chr5	33489902	33490072	(148048187)	+	MER92B	LTR/ERV1	1	171	(465)	3098440
798	21.6	12.6	3.8	chr5	33490080	33490397	(148047862)	C	LTR29	LTR/ERV1	(46)	576	227	3098441
20	4.2	0.0	0.0	chr5	33490415	33490439	(148047820)	+	(TC)n	Simple_repeat	1	25	(0)	3098442
358	26.0	1.0	3.9	chr5	33490465	33490568	(148047691)	C	LTR29	LTR/ERV1	(385)	237	137	3098441
355	26.4	7.9	2.1	chr5	34007337	34007479	(147530780)	+	Charlie4z	DNA/hAT-Charlie	10	161	(6)	3099218
1321	29.6	1.8	6.0	chr5	35650833	35651295	(145886964)	C	MLT1J	LTR/ERVL-MaLR	(34)	478	36	3101699
526	28.6	3.5	5.6	chr5	35651367	35651544	(145886715)	+	Charlie17a	DNA/hAT-Charlie	44	217	(0)	3101700
17	15.4	4.7	0.0	chr5	36241269	36241311	(145296948)	+	(CTCTCC)n	Simple_repeat	1	45	(0)	3102471
13	9.6	0.0	0.0	chr5	36242066	36242088	(145296171)	+	(TTTG)n	Simple_repeat	1	23	(0)	3102474
1949	18.7	2.7	2.4	chr5	36487724	36488095	(145050164)	+	MLT1A	LTR/ERVL-MaLR	1	373	(1)	3102879
1196	25.8	11.1	2.6	chr5	36488096	36488295	(145049964)	C	MLT1J	LTR/ERVL-MaLR	(294)	218	1	3102878
2201	16.7	5.4	0.0	chr5	38047992	38048339	(143489920)	+	MLT2D	LTR/ERVL	1	368	(46)	3105479
53	0.0	0.0	0.0	chr5	38048340	38048384	(143489875)	+	(AC)n	Simple_repeat	1	45	(0)	3105480
2201	16.7	5.4	0.0	chr5	38048385	38048419	(143489840)	+	MLT2D	LTR/ERVL	369	405	(9)	3105479
899	20.9	16.0	4.2	chr5	38048492	38048875	(143489384)	+	MLT1J1	LTR/ERVL-MaLR	7	444	(0)	3105481
1641	23.6	4.3	1.6	chr5	38426546	38426975	(143111284)	C	MLT1J2	LTR/ERVL-MaLR	(6)	442	1	3106114
184	39.5	5.0	0.7	chr5	39668846	39668998	(141869261)	C	Tigger19b	DNA/TcMar-Tigger	(17)	533	374	3107917
1067	28.8	6.2	2.9	chr5	39669053	39669438	(141868821)	+	MLT1J2	LTR/ERVL-MaLR	3	402	(46)	3107918
189	28.3	4.8	0.0	chr5	40756193	40756252	(140782007)	C	L2c	LINE/L2	(52)	3335	3273	3109365
13	20.5	5.8	1.8	chr5	40797717	40797768	(140740491)	+	(CGCCCGC)n	Simple_repeat	1	55	(0)	3109433
19	23.3	1.4	5.4	chr5	40798198	40798270	(140739989)	+	G-rich	Low_complexity	1	74	(0)	3109434
730	29.0	11.9	2.8	chr5	41094912	41095308	(140442951)	+	MLT1J	LTR/ERVL-MaLR	6	443	(69)	3109960
11	24.1	2.6	0.0	chr5	43603102	43603140	(137935119)	+	G-rich	Low_complexity	1	40	(0)	3113334
425	23.1	2.5	8.8	chr5	44218814	44218984	(137319275)	+	L1M5	LINE/L1	3912	4071	(2075)	3113976
462	36.1	1.8	1.8	chr5	44219004	44219226	(137319033)	+	LTR33B	LTR/ERVL	1	223	(280)	3113977
936	26.7	2.3	6.7	chr5	53416328	53416640	(128121619)	C	MLT1J1	LTR/ERVL-MaLR	(145)	299	1	3120221
557	27.0	7.4	3.5	chr5	53416678	53416898	(128121361)	C	L1ME4a	LINE/L1	(195)	5929	5693	3120222
12	14.6	0.0	5.9	chr5	55308084	55308117	(126230142)	+	A-rich	Low_complexity	1	34	(0)	3123045
2393	9.2	0.0	0.0	chr5	55451557	55451849	(126086410)	C	AluSx3	SINE/Alu	(7)	304	12	3123244
13	20.1	6.5	0.0	chr5	61330994	61331039	(120207220)	+	(CGCCCGC)n	Simple_repeat	1	49	(0)	3132105
22	0.0	0.0	0.0	chr5	65624711	65624734	(115913525)	+	(T)n	Simple_repeat	1	24	(0)	3138133
21	18.5	1.3	7.6	chr5	65722126	65722203	(115816056)	+	G-rich	Low_complexity	1	79	(0)	3138300
14	27.2	3.5	0.0	chr5	67004157	67004213	(114534046)	+	(GCCGCG)n	Simple_repeat	1	59	(0)	3140250
16	14.5	0.0	0.0	chr5	68288513	68288543	(113249716)	+	(CGAGC)n	Simple_repeat	1	31	(0)	3142020
13	23.2	3.9	1.9	chr5	69094190	69094241	(112444018)	+	(GCGGCA)n	Simple_repeat	1	54	(0)	3143234
382	28.3	5.5	1.7	chr5	69189834	69190009	(112348250)	+	MIRb	SINE/MIR	45	227	(41)	3143460
1203	26.4	7.3	1.4	chr5	71887599	71888013	(109650246)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	70	3148208
933	28.5	4.7	0.3	chr5	71888142	71888426	(109649833)	C	LTR86C	LTR/ERVL	(0)	621	324	3148209
1267	25.6	8.9	7.8	chr5	73188750	73189224	(108349035)	C	MLT1J	LTR/ERVL-MaLR	(31)	481	1	3150136
24	16.6	2.1	0.0	chr5	73189232	73189278	(108348981)	+	(CT)n	Simple_repeat	1	48	(0)	3150137
849	28.6	10.0	4.2	chr5	74109185	74109633	(107428626)	C	LTR33B	LTR/ERVL	(3)	500	23	3151515
544	24.1	6.0	4.9	chr5	74673513	74673695	(106864564)	+	LTR67B	LTR/ERVL	11	195	(425)	3152332
244	31.2	5.9	6.3	chr5	74673578	74673799	(106864460)	+	MLT1N2	LTR/ERVL-MaLR	100	320	(242)	3152333
327	29.4	0.0	1.0	chr5	74673837	74673939	(106864320)	+	LTR67B	LTR/ERVL	492	593	(27)	3152332
23	17.1	1.3	7.7	chr5	75511631	75511707	(106026552)	+	(CCCTC)n	Simple_repeat	1	78	(0)	3153650
322	20.9	5.3	7.2	chr5	77990717	77990880	(103547379)	C	Charlie7a	DNA/hAT-Charlie	(96)	176	41	3157491
15	19.9	5.4	3.4	chr5	78648612	78648667	(102889592)	+	GA-rich	Low_complexity	1	59	(0)	3158377
13	18.6	4.3	4.1	chr5	78648763	78648809	(102889450)	+	GA-rich	Low_complexity	1	49	(0)	3158378
16	28.6	0.0	1.8	chr5	78648818	78648874	(102889385)	+	(CCCGGC)n	Simple_repeat	1	57	(0)	3158379
20	19.9	5.7	4.3	chr5	78648874	78648961	(102889298)	+	G-rich	Low_complexity	1	93	(0)	3158380
20	18.8	3.6	1.7	chr5	78984876	78984931	(102553328)	+	(GCG)n	Simple_repeat	1	58	(0)	3158884
953	24.9	14.4	1.8	chr5	80760609	80760948	(100777311)	C	MLT1J1	LTR/ERVL-MaLR	(0)	444	55	3162163
1747	18.3	0.6	6.9	chr5	80761055	80761418	(100776841)	C	MER61A	LTR/ERV1	(0)	341	1	3162164
813	23.6	10.9	5.9	chr5	81078812	81079236	(100459023)	C	LTR67B	LTR/ERVL	(71)	432	3	3162663
193	27.2	15.0	0.8	chr5	81301263	81301388	(100236871)	+	L2b	LINE/L2	3017	3163	(212)	3162953
206	23.8	13.1	3.6	chr5	81301405	81301487	(100236772)	+	L2b	LINE/L2	3239	3330	(45)	3162953
1332	25.8	6.0	7.3	chr5	81544728	81545077	(99993182)	+	MLT1J2	LTR/ERVL-MaLR	1	346	(102)	3163310
463	21.3	13.8	8.9	chr5	82294346	82294399	(99243860)	C	MIRc	SINE/MIR	(0)	268	213	3164418
2338	8.7	1.9	1.0	chr5	82294400	82294708	(99243551)	+	AluSx	SINE/Alu	1	312	(0)	3164419
501	21.3	13.8	8.9	chr5	82294709	82294900	(99243359)	C	MIRb	SINE/MIR	(52)	216	8	3164418
3091	16.4	3.0	7.6	chr5	84862011	84862669	(96675590)	+	LTR9D	LTR/ERV1	18	645	(0)	3167813
12	5.0	0.0	4.3	chr5	86617668	86617690	(94920569)	+	(AAGA)n	Simple_repeat	1	23	(0)	3170030
841	24.9	18.5	3.2	chr5	89256018	89256394	(92281865)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	1	3173333
224	29.9	16.4	0.0	chr5	89256502	89256598	(92281661)	C	MIRb	SINE/MIR	(129)	139	24	3173334
248	31.3	10.4	3.0	chr5	90410217	90410384	(91127875)	C	MER5A	DNA/hAT-Charlie	(5)	184	3	3174712
11	27.4	1.6	4.8	chr5	90474401	90474462	(91063797)	+	GA-rich	Low_complexity	1	63	(0)	3174832
506	28.6	10.0	7.3	chr5	93305993	93306494	(88231765)	+	LTR33B	LTR/ERVL	2	501	(2)	3178521
23	20.5	1.5	3.0	chr5	95620841	95620905	(85917354)	+	(CGC)n	Simple_repeat	1	66	(0)	3181416
339	17.4	4.2	6.1	chr5	96146695	96146792	(85391467)	C	MLT1I	LTR/ERVL-MaLR	(7)	441	346	3182195
468	24.0	0.6	9.5	chr5	96146823	96147011	(85391248)	C	MLT1I	LTR/ERVL-MaLR	(172)	239	68	3182195
20	12.6	0.0	0.0	chr5	96434605	96434639	(85103620)	+	(TTG)n	Simple_repeat	1	35	(0)	3182552
281	4.1	3.9	12.5	chr5	103099116	103099171	(78439088)	+	LTR67B	LTR/ERVL	71	121	(499)	3190970
448	20.0	0.0	0.0	chr5	103099137	103099216	(78439043)	+	MLT1J	LTR/ERVL-MaLR	101	180	(332)	3190971
18	18.9	4.8	0.0	chr5	103099355	103099396	(78438863)	+	(AT)n	Simple_repeat	1	44	(0)	3190972
15	33.0	0.0	1.8	chr5	103259272	103259326	(78278933)	+	(GC)n	Simple_repeat	1	55	(0)	3191198
18	12.0	0.0	0.0	chr5	103562811	103562837	(77975422)	+	(G)n	Simple_repeat	1	27	(0)	3191611
14	9.3	0.0	0.0	chr5	107672098	107672120	(73866139)	+	(GCA)n	Simple_repeat	1	23	(0)	3196632
640	15.9	9.8	0.0	chr5	111091902	111092058	(70446201)	C	L1MC5	LINE/L1	(191)	9113	8940	3200971
261	28.9	11.6	2.1	chr5	112166403	112166596	(69371663)	+	L2a	LINE/L2	2954	3168	(258)	3202393
555	24.7	13.6	0.0	chr5	112166706	112166883	(69371376)	C	MER58C	DNA/hAT-Charlie	(3)	212	7	3202394
2288	11.2	3.0	0.0	chr5	112647879	112648164	(68890095)	C	AluSx1	SINE/Alu	(17)	295	1	3203060
391	25.0	2.4	9.8	chr5	112707148	112707280	(68830979)	+	L2c	LINE/L2	3264	3386	(1)	3203152
1103	27.2	6.9	5.5	chr5	115419686	115420159	(66118100)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	32	3206769
15	16.9	0.0	0.0	chr5	116574585	116574617	(64963642)	+	G-rich	Low_complexity	1	33	(0)	3208281
843	25.9	6.8	0.8	chr5	119445219	119445591	(62092668)	+	L1MEh	LINE/L1	910	1306	(929)	3212318
729	13.9	0.9	0.0	chr5	119445721	119445835	(62092424)	+	5S	rRNA	6	121	(0)	3212319
296	24.6	11.2	2.1	chr5	119445943	119446129	(62092130)	+	L1MEh	LINE/L1	1296	1501	(734)	3212318
15	18.5	0.0	6.1	chr5	124735404	124735452	(56802807)	+	(GCCCAGG)n	Simple_repeat	1	49	(0)	3219039
14	9.3	5.6	2.6	chr5	126601149	126601184	(54937075)	+	(GGAGCCA)n	Simple_repeat	1	38	(0)	3221499
14	8.1	9.8	2.2	chr5	126777769	126777809	(54760450)	+	(CGACGCG)n	Simple_repeat	1	45	(0)	3221960
17	9.1	2.6	5.0	chr5	127229598	127229636	(54308623)	+	(CGAGG)n	Simple_repeat	1	40	(0)	3222563
13	26.1	0.0	4.1	chr5	128083381	128083429	(53454830)	+	GA-rich	Low_complexity	1	49	(0)	3223722
529	27.4	3.7	3.1	chr5	131230526	131230687	(50307572)	C	LTR33B	LTR/ERVL	(288)	215	53	3227589
498	20.9	9.2	5.5	chr5	132190262	132190427	(49347832)	+	LTR50	LTR/ERVL	1	174	(357)	3229023
12	18.3	2.0	7.7	chr5	132777303	132777353	(48760906)	+	(CCGCC)n	Simple_repeat	1	52	(0)	3229898
15	18.1	2.6	0.0	chr5	133052191	133052250	(48486009)	+	(GCCGGA)n	Simple_repeat	1	61	(0)	3230468
27	37.1	1.4	1.4	chr5	133423571	133423709	(48114550)	+	(GGT)n	Simple_repeat	1	141	(0)	3230939
14	18.8	6.0	1.9	chr5	134845910	134845959	(46692300)	+	(CGCGTG)n	Simple_repeat	1	53	(0)	3233498
12	30.2	2.8	2.7	chr5	134905078	134905149	(46633110)	+	(GGCCGGC)n	Simple_repeat	1	74	(0)	3233621
27	11.1	0.0	0.0	chr5	135028543	135028581	(46509678)	+	(T)n	Simple_repeat	1	39	(0)	3233790
14	17.1	2.4	2.4	chr5	135028626	135028666	(46509593)	+	(GGAGGTG)n	Simple_repeat	1	42	(0)	3233791
21	21.8	1.7	1.6	chr5	135028703	135028762	(46509497)	+	(CCCGCG)n	Simple_repeat	1	61	(0)	3233792
17	22.6	1.4	5.7	chr5	135399286	135399360	(46138899)	+	(CGGCCC)n	Simple_repeat	1	71	(0)	3234231
244	13.9	0.0	0.0	chr5	137426714	137426749	(44111510)	C	LTR88a	LTR/Gypsy?	(125)	691	656	3236951
527	25.1	38.5	3.0	chr5	137426970	137427258	(44111001)	+	MLT1I	LTR/ERVL-MaLR	47	440	(4)	3236952
18	20.2	0.0	2.1	chr5	138575158	138575204	(42963055)	+	(GGCCCGA)n	Simple_repeat	1	47	(0)	3239128
2159	9.7	0.3	1.0	chr5	138632818	138633127	(42905132)	C	AluSg7	SINE/Alu	(1)	308	1	3239252
540	19.2	0.9	0.9	chr5	138633128	138633232	(42905027)	C	MLT1J	LTR/ERVL-MaLR	(337)	175	71	3239253
1238	25.6	9.1	0.1	chr5	138633274	138633864	(42904395)	+	L2a	LINE/L2	2720	3374	(1)	3239247
311	16.7	0.0	0.0	chr5	138945654	138945701	(42592558)	+	MIRc	SINE/MIR	98	145	(123)	3239857
11	12.8	8.8	0.0	chr5	138945820	138945853	(42592406)	+	(CTCCAGC)n	Simple_repeat	1	37	(0)	3239858
283	32.7	12.0	1.0	chr5	139439598	139439804	(42098455)	+	MIRc	SINE/MIR	2	234	(34)	3240769
263	26.6	4.8	7.2	chr5	139657089	139657280	(41880979)	C	MIR	SINE/MIR	(29)	233	69	3241259
207	30.5	0.0	0.0	chr5	139657308	139657366	(41880893)	+	L2b	LINE/L2	3306	3364	(11)	3241260
14	12.5	0.0	0.0	chr5	139657468	139657493	(41880766)	+	(TGAA)n	Simple_repeat	1	26	(0)	3241261
12	12.4	8.6	0.0	chr5	140856192	140856226	(40682033)	+	(GCTGGA)n	Simple_repeat	1	38	(0)	3243304
15	29.0	3.2	0.0	chr5	141876360	141876422	(39661837)	+	(GCCGGC)n	Simple_repeat	1	65	(0)	3244777
796	26.1	8.0	0.4	chr5	141914610	141914851	(39623408)	+	MIRb	SINE/MIR	6	267	(1)	3244860
427	23.2	4.1	1.6	chr5	142095923	142096074	(39442185)	+	MIRc	SINE/MIR	37	194	(14)	3245241
2100	12.3	3.0	0.0	chr5	142096089	142096381	(39441878)	+	AluSx1	SINE/Alu	1	302	(10)	3245242
2020	20.7	3.2	4.1	chr5	143782882	143783390	(37754869)	+	MLT1D	LTR/ERVL-MaLR	1	504	(1)	3248245
10154	25.2	5.5	5.1	chr5	145139332	145142727	(36395532)	C	L1MA1	LINE/L1	(2451)	5114	2030	3250252
1379	34.8	3.4	2.7	chr5	145143013	145143721	(36394538)	C	L1MA1	LINE/L1	(6453)	1113	400	3250252
817	23.7	8.2	1.6	chr5	146648034	146648226	(34890033)	+	MLT1J2	LTR/ERVL-MaLR	3	209	(239)	3252922
9695	15.4	3.6	2.8	chr5	147382092	147383300	(34154959)	C	L1M4c	LINE/L1	(5163)	1221	13	3254159
13	8.5	4.0	0.0	chr5	147453505	147453529	(34084730)	+	(AGGG)n	Simple_repeat	1	26	(0)	3254263
464	20.0	16.5	1.2	chr5	149399863	149400043	(32138216)	+	LTR67B	LTR/ERVL	7	278	(342)	3257646
16	12.8	5.7	0.0	chr5	149732036	149732045	(31806214)	+	(GC)n	Simple_repeat	1	10	(0)	3258412
38	0.0	0.0	0.0	chr5	149732046	149732078	(31806181)	+	(GT)n	Simple_repeat	1	33	(0)	3258413
16	12.8	5.7	0.0	chr5	149732079	149732102	(31806157)	+	(GC)n	Simple_repeat	1	26	(0)	3258414
537	28.8	6.7	2.9	chr5	150159149	150159320	(31378939)	+	MIR	SINE/MIR	17	195	(67)	3259332
2355	9.1	0.3	0.0	chr5	150159386	150159681	(31378578)	+	AluSp	SINE/Alu	2	298	(15)	3259333
14	19.1	6.2	4.3	chr5	150190148	150190218	(31348041)	+	(CGCAGCC)n	Simple_repeat	1	72	(0)	3259399
300	36.4	10.0	2.5	chr5	150449218	150449420	(31088839)	C	MIRb	SINE/MIR	(43)	225	6	3259964
14	18.9	0.0	2.6	chr5	150449424	150449461	(31088798)	+	(CGTGGC)n	Simple_repeat	1	38	(0)	3259965
501	14.1	7.6	0.0	chr5	150450124	150450208	(31088051)	+	FLAM_A	SINE/Alu	10	101	(41)	3259966
240	29.4	8.7	4.2	chr5	150450261	150450402	(31087857)	C	MIRb	SINE/MIR	(0)	262	114	3259967
2011	10.3	1.1	1.8	chr5	150450500	150450780	(31087479)	C	AluSc8	SINE/Alu	(32)	279	1	3259968
14	12.0	5.3	2.5	chr5	150672266	150672303	(30865956)	+	G-rich	Low_complexity	1	40	(0)	3260490
244	32.9	6.8	0.7	chr5	151081330	151081482	(30456777)	C	MIR3	SINE/MIR	(16)	192	30	3261109
294	31.2	12.5	0.7	chr5	151157894	151158048	(30380211)	C	MIR3	SINE/MIR	(3)	205	30	3261276
1262	25.4	12.4	4.6	chr5	151721915	151722372	(29815887)	+	MLT1J	LTR/ERVL-MaLR	1	499	(13)	3262482
18	0.0	0.0	0.0	chr5	151924884	151924903	(29613356)	+	(T)n	Simple_repeat	1	20	(0)	3262871
699	21.0	5.7	5.1	chr5	153832101	153832276	(27705983)	+	MLT1J1	LTR/ERVL-MaLR	29	205	(239)	3265957
12	9.2	0.0	4.0	chr5	154755424	154755448	(26782811)	+	(GGGA)n	Simple_repeat	1	25	(0)	3267979
29	19.8	2.3	3.4	chr5	157266037	157266122	(24272137)	+	G-rich	Low_complexity	1	88	(0)	3272403
15	27.4	0.0	0.0	chr5	157266218	157266265	(24271994)	+	G-rich	Low_complexity	1	48	(0)	3272404
13	16.9	0.0	8.5	chr5	157731251	157731297	(23806962)	+	GA-rich	Low_complexity	1	47	(0)	3273268
13	21.7	7.5	0.0	chr5	157859249	157859301	(23678958)	+	(TGAGA)n	Simple_repeat	1	57	(0)	3273467
725	15.4	0.8	0.8	chr5	157859316	157859433	(23678826)	+	MER5A	DNA/hAT-Charlie	72	189	(0)	3273468
725	27.0	11.9	6.1	chr5	158049613	158049990	(23488269)	+	MLT1J2	LTR/ERVL-MaLR	44	446	(2)	3273916
929	24.4	9.4	9.2	chr5	158213008	158213454	(23324805)	+	MLT1J2	LTR/ERVL-MaLR	1	448	(0)	3274217
778	27.7	8.5	9.9	chr5	158384210	158384456	(23153803)	+	MLT1J	LTR/ERVL-MaLR	100	317	(195)	3274507
862	28.8	7.0	3.3	chr5	158384457	158384851	(23153408)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	1	3274508
730	32.2	8.0	1.7	chr5	159774213	159774632	(21763627)	C	L2c	LINE/L2	(1)	3386	2938	3276697
285	22.2	2.9	4.6	chr5	160120031	160120127	(21418132)	C	L2a	LINE/L2	(8)	3418	3292	3277396
1041	20.2	0.0	0.0	chr5	160356349	160356536	(21181723)	C	MER5A	DNA/hAT-Charlie	(0)	189	2	3278015
532	21.4	0.0	6.7	chr5	160356537	160356572	(21181687)	+	MIR3	SINE/MIR	156	187	(21)	3278014
317	20.6	14.4	2.7	chr5	163627036	163627145	(17911114)	C	MLT1J2	LTR/ERVL-MaLR	(265)	183	59	3282873
2040	24.1	9.9	0.8	chr5	163627199	163627805	(17910454)	C	L1ME3	LINE/L1	(17)	6145	5478	3282874
804	27.1	17.3	4.7	chr5	164224665	164225111	(17313148)	C	LTR33A_	LTR/ERVL	(6)	514	12	3283711
16	4.5	0.0	0.0	chr5	164225155	164225177	(17313082)	+	(AAAC)n	Simple_repeat	1	23	(0)	3283712
391	35.5	5.5	8.3	chr5	165639441	165639873	(15898386)	C	LTR33B	LTR/ERVL	(13)	490	71	3285633
466	28.6	9.8	3.4	chr5	165640087	165640325	(15897934)	C	MLT1K	LTR/ERVL-MaLR	(174)	421	166	3285634
2128	24.1	8.8	2.6	chr5	166735052	166735668	(14802591)	C	MLT2F	LTR/ERVL	(4)	659	1	3287183
196	28.1	3.3	13.6	chr5	166735669	166735702	(14802557)	+	L2a	LINE/L2	3354	3384	(42)	3287182
12	16.5	0.0	0.0	chr5	166735776	166735802	(14802457)	+	(CTCT)n	Simple_repeat	1	27	(0)	3287184
19	4.0	0.0	0.0	chr5	168579575	168579600	(12958659)	+	(GCC)n	Simple_repeat	1	26	(0)	3290342
928	21.1	4.1	4.6	chr5	169019971	169020189	(12518070)	+	MER58A	DNA/hAT-Charlie	1	218	(6)	3291115
647	29.9	7.3	5.2	chr5	169020211	169020637	(12517622)	+	MLT1J1	LTR/ERVL-MaLR	8	444	(0)	3291116
15	12.9	4.2	6.0	chr5	169637178	169637225	(11901034)	+	G-rich	Low_complexity	1	50	(0)	3292109
12	10.0	0.0	0.0	chr5	170861996	170862017	(10676242)	+	(GCCG)n	Simple_repeat	1	22	(0)	3294425
17	12.9	4.5	2.2	chr5	170862120	170862163	(10676096)	+	G-rich	Low_complexity	1	46	(0)	3294426
20	3.3	3.2	0.0	chr5	170862656	170862686	(10675573)	+	(CGGGCG)n	Simple_repeat	1	32	(0)	3294427
19	18.9	0.0	0.0	chr5	172006555	172006596	(9531663)	+	(GGCGGC)n	Simple_repeat	1	42	(0)	3296455
418	30.2	10.2	4.8	chr5	172503126	172503420	(9034839)	+	MLT1J2	LTR/ERVL-MaLR	66	378	(70)	3297591
28	20.1	0.0	0.0	chr5	173616546	173616603	(7921656)	+	(GGC)n	Simple_repeat	1	58	(0)	3299921
195	38.7	1.9	2.8	chr5	173616953	173617061	(7921198)	+	MER5A	DNA/hAT-Charlie	44	151	(38)	3299922
2140	13.6	0.0	0.0	chr5	173752289	173752583	(7785676)	+	AluJb	SINE/Alu	6	300	(12)	3300212
324	27.6	10.5	1.7	chr5	173752894	173753037	(7785222)	+	MIR3	SINE/MIR	36	192	(38)	3300213
4159	20.8	8.6	2.0	chr5	174324217	174325385	(7212874)	+	Charlie1	DNA/hAT-Charlie	1456	2708	(73)	3301286
1159	26.8	7.2	7.4	chr5	175746886	175747397	(5790862)	+	MLT1J	LTR/ERVL-MaLR	1	511	(1)	3304051
40	9.5	0.0	0.0	chr5	177090099	177090155	(4448104)	+	(TG)n	Simple_repeat	1	57	(0)	3306638
16	25.1	1.7	3.3	chr5	177134341	177134400	(4403859)	+	(GCG)n	Simple_repeat	1	61	(0)	3306743
14	24.3	2.0	2.0	chr5	177455933	177455982	(4082277)	+	(GCCCT)n	Simple_repeat	1	51	(0)	3307453
12	13.9	0.0	0.0	chr5	177456202	177456225	(4082034)	+	(GGGA)n	Simple_repeat	1	24	(0)	3307454
17	13.5	0.0	0.0	chr5	177497383	177497415	(4040844)	+	(GGCGGG)n	Simple_repeat	1	33	(0)	3307530
19	3.4	3.3	0.0	chr5	177553950	177553979	(3984280)	+	(TCCCAG)n	Simple_repeat	1	31	(0)	3307610
213	35.1	13.0	0.7	chr5	177591883	177592023	(3946236)	+	MIR3	SINE/MIR	35	200	(68)	3307700
15	13.4	7.0	2.2	chr5	177592155	177592197	(3946062)	+	(GCG)n	Simple_repeat	1	46	(0)	3307701
13	31.2	0.0	0.0	chr5	178204924	178204974	(3333285)	+	(GGCCGG)n	Simple_repeat	1	51	(0)	3308794
183	22.5	2.4	0.0	chr5	178555727	178555766	(2982493)	C	MIRc	SINE/MIR	(193)	75	35	3309393
253	30.5	3.5	0.0	chr5	178556059	178556140	(2982119)	+	L1ME4b	LINE/L1	451	535	(357)	3309394
12	23.3	0.0	0.0	chr5	178895967	178896001	(2642258)	+	G-rich	Low_complexity	1	35	(0)	3310021
235	28.4	9.1	1.7	chr5	180831010	180831181	(707078)	C	MER67A	LTR/ERV1	(475)	186	1	3313310
13	0.0	0.0	0.0	chr5	180831186	180831202	(707057)	+	(CCG)n	Simple_repeat	1	17	(0)	3313311
834	10.4	0.0	0.0	chr5	180831416	180831530	(706729)	C	AluSq2	SINE/Alu	(17)	296	182	3313312
1493	10.0	4.9	1.7	chr5	181027774	181028008	(510251)	C	LTR1A2	LTR/ERV1	(0)	837	595	3313540
1648	13.6	19.8	1.9	chr5	181028010	181028368	(509891)	C	LTR1A2	LTR/ERV1	(392)	445	7	3313540
4933	15.1	3.1	4.1	chr5	181028379	181028514	(509745)	+	L1MA8	LINE/L1	3951	4081	(3481)	3313536
4377	16.9	14.6	3.1	chr5	181069831	181070864	(467395)	C	MER52C	LTR/ERV1	(105)	1173	1	3313602
638	0.0	1.4	0.0	chr5	181191687	181191758	(346501)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	3313826
13	9.3	5.3	5.0	chr5	181191960	181191997	(346262)	+	G-rich	Low_complexity	1	40	(0)	3313827
244	24.8	19.9	0.8	chr6	300785	300902	(170505077)	C	MLT1N2	LTR/ERVL-MaLR	(8)	554	409	3314662
226	24.6	6.2	0.0	chr6	301168	301228	(170504751)	C	MLT1N2	LTR/ERVL-MaLR	(497)	65	1	3314662
12	17.6	2.4	4.7	chr6	393109	393150	(170412829)	+	G-rich	Low_complexity	1	43	(0)	3314761
13	12.7	0.0	0.0	chr6	693188	693213	(170112766)	+	(AGGGG)n	Simple_repeat	1	26	(0)	3315114
1519	21.2	2.2	4.6	chr6	1524332	1524697	(169281282)	C	MLT1A0	LTR/ERVL-MaLR	(8)	357	1	3316257
19	11.6	0.0	0.0	chr6	2765183	2765210	(168040769)	+	(C)n	Simple_repeat	1	28	(0)	3317888
51	22.4	3.1	5.0	chr6	2999648	2999841	(167806138)	+	G-rich	Low_complexity	1	200	(0)	3318233
183	28.6	2.0	0.0	chr6	3000305	3000353	(167805626)	C	MIR	SINE/MIR	(88)	174	125	3318234
15	23.0	2.9	8.6	chr6	3118584	3118685	(167687294)	+	(GGCGG)n	Simple_repeat	1	105	(0)	3318430
192	35.7	7.9	1.5	chr6	3402145	3402346	(167403633)	+	L2c	LINE/L2	2660	2875	(544)	3318838
724	22.9	14.7	2.1	chr6	5412121	5412445	(165393534)	+	LTR16A	LTR/ERVL	1	373	(78)	3321997
1068	27.2	9.4	5.5	chr6	6890394	6890833	(163915146)	C	LTR33A	LTR/ERVL	(16)	504	46	3324147
1529	27.2	12.6	4.4	chr6	7588924	7590008	(163215971)	+	L1MC4	LINE/L1	6831	8016	(26)	3325412
796	29.3	2.5	1.8	chr6	7673825	7674099	(163131880)	C	L2c	LINE/L2	(20)	3367	3091	3325552
1086	26.6	16.3	3.3	chr6	7674100	7674671	(163131308)	+	MLT2F	LTR/ERVL	2	651	(12)	3325553
1294	27.8	3.8	3.8	chr6	8652479	8653038	(162152941)	C	MLT2F	LTR/ERVL	(103)	560	1	3327014
449	22.2	9.0	3.4	chr6	10146821	10146997	(160658982)	C	L1M6	LINE/L1	(5467)	1029	842	3329013
17	16.4	1.9	5.6	chr6	10147020	10147072	(160658907)	+	(CCCTCCA)n	Simple_repeat	1	54	(0)	3329014
262	25.0	12.3	2.0	chr6	10147127	10147201	(160658778)	C	L1M6	LINE/L1	(5962)	534	457	3329013
26	0.0	0.0	0.0	chr6	10147202	10147226	(160658753)	+	(GTTTT)n	Simple_repeat	1	25	(0)	3329015
262	25.0	12.3	2.0	chr6	10147227	10147252	(160658727)	C	L1M6	LINE/L1	(6040)	456	421	3329013
413	27.5	0.6	5.3	chr6	10147268	10147436	(160658543)	+	L1M6	LINE/L1	1597	1757	(4739)	3329009
1652	18.3	0.0	4.2	chr6	10748242	10748552	(160057427)	C	AluSx	SINE/Alu	(14)	298	1	3330112
1106	21.6	16.1	3.2	chr6	11249331	11249674	(159556305)	C	MLT1J	LTR/ERVL-MaLR	(115)	397	1	3330949
829	20.4	3.0	0.6	chr6	13406890	13407052	(157398927)	+	MLT1J	LTR/ERVL-MaLR	30	196	(316)	3334205
17	18.2	1.8	5.4	chr6	13814560	13814614	(156991365)	+	G-rich	Low_complexity	1	56	(0)	3334957
9092	8.5	13.1	1.9	chr6	14782720	14784117	(156021862)	C	LTR12C	LTR/ERV1	(0)	1579	3	3336544
815	24.4	4.7	3.1	chr6	14799976	14800203	(156005776)	+	MLT1J	LTR/ERVL-MaLR	28	259	(253)	3336570
25	25.2	0.0	3.5	chr6	15245200	15245284	(155560695)	+	G-rich	Low_complexity	1	85	(0)	3337657
2258	8.9	11.0	0.0	chr6	15377146	15377461	(155428518)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3337863
951	13.2	0.0	0.0	chr6	15377500	15377628	(155428351)	C	AluSx	SINE/Alu	(46)	266	138	3337864
283	11.8	0.0	11.8	chr6	15377629	15377696	(155428283)	+	AluJr	SINE/Alu	94	153	(159)	3337865
808	13.2	1.6	0.0	chr6	15377701	15377821	(155428158)	C	AluSx	SINE/Alu	(179)	133	11	3337864
935	22.0	15.4	2.7	chr6	15754017	15754569	(155051410)	C	MLT2F	LTR/ERVL	(0)	663	3	3338386
890	24.6	13.5	1.2	chr6	15754677	15755080	(155050899)	C	LTR16B2	LTR/ERVL	(0)	462	7	3338387
644	25.2	12.8	1.4	chr6	15961299	15961580	(154844399)	C	MLT2F	LTR/ERVL	(319)	344	26	3338763
510	32.5	10.4	0.4	chr6	15961601	15961850	(154844129)	C	L3	LINE/CR1	(1532)	2567	2290	3338755
16	20.2	0.0	4.1	chr6	16129126	16129174	(154676805)	+	G-rich	Low_complexity	1	49	(0)	3339045
247	28.3	1.1	0.0	chr6	17986695	17986786	(152819193)	+	MIR3	SINE/MIR	93	185	(23)	3342183
18	12.8	0.0	0.0	chr6	18122654	18122687	(152683292)	+	(ACGGTC)n	Simple_repeat	1	34	(0)	3342482
1044	20.2	7.3	1.1	chr6	19999731	20000000	(150805979)	+	MLT1J1	LTR/ERVL-MaLR	1	288	(156)	3345231
13	23.6	4.8	3.0	chr6	20212577	20212639	(150593340)	+	(CCGGC)n	Simple_repeat	1	66	(0)	3345605
1535	17.4	0.3	13.6	chr6	20330730	20331074	(150474905)	+	AluJb	SINE/Alu	1	299	(13)	3345836
411	18.2	11.6	2.9	chr6	20331095	20331196	(150474783)	+	LTR67B	LTR/ERVL	9	120	(500)	3345837
438	6.6	3.2	0.0	chr6	20331216	20331276	(150474703)	+	MADE1	DNA/TcMar-Mariner	2	64	(16)	3345838
233	15.7	5.5	7.3	chr6	20331345	20331399	(150474580)	+	LTR67B	LTR/ERVL	220	273	(347)	3345837
326	28.6	0.0	10.0	chr6	20331392	20331531	(150474448)	+	LTR67B	LTR/ERVL	409	534	(86)	3345837
397	31.5	8.0	8.2	chr6	21258615	21259005	(149546974)	C	MLT1J	LTR/ERVL-MaLR	(120)	392	3	3347356
443	24.5	2.8	4.8	chr6	21259143	21259213	(149546766)	+	MER5B	DNA/hAT-Charlie	36	103	(75)	3347357
477	36.4	5.2	0.0	chr6	21536178	21536435	(149269544)	C	L3	LINE/CR1	(622)	3477	3206	3347825
571	23.3	5.1	3.7	chr6	21536441	21536637	(149269342)	+	MLT1J	LTR/ERVL-MaLR	1	177	(335)	3347828
261	31.6	3.9	4.9	chr6	21536659	21536841	(149269138)	+	MLT1J	LTR/ERVL-MaLR	302	482	(30)	3347828
67	8.2	4.5	1.4	chr6	22906375	22906506	(147899473)	+	(AC)n	Simple_repeat	1	138	(0)	3349900
23	14.7	2.2	0.0	chr6	24720260	24720304	(146085675)	+	(GGC)n	Simple_repeat	1	46	(0)	3352413
15	13.9	0.0	2.9	chr6	24720504	24720537	(146085442)	+	A-rich	Low_complexity	1	34	(0)	3352414
12	19.7	2.3	4.4	chr6	26501645	26501688	(144304291)	+	(CGCCGAG)n	Simple_repeat	1	45	(0)	3355355
2225	13.8	5.6	1.5	chr6	26502051	26502441	(144303538)	C	MER83	LTR/ERV1	(0)	448	41	3355356
2181	11.0	0.0	0.7	chr6	27334586	27334877	(143471102)	+	AluSx	SINE/Alu	1	290	(22)	3356731
634	5.3	0.0	0.0	chr6	27334987	27335062	(143470917)	C	tRNA-Lys-AAA	tRNA	(0)	76	1	3356732
371	32.2	0.8	0.0	chr6	27791621	27791738	(143014241)	C	MIRb	SINE/MIR	(22)	246	128	3357600
4484	7.9	2.5	0.0	chr6	27792718	27793312	(143012667)	C	LTR71B	LTR/ERV1	(0)	610	1	3357601
17	0.0	0.0	0.0	chr6	27793440	27793458	(143012521)	+	(A)n	Simple_repeat	1	19	(0)	3357602
2019	13.5	0.0	0.0	chr6	27806651	27806938	(142999041)	C	AluJb	SINE/Alu	(20)	292	5	3357633
19	4.5	0.0	0.0	chr6	27814166	27814188	(142991791)	+	(A)n	Simple_repeat	1	23	(0)	3357640
2114	14.0	0.7	0.0	chr6	27815588	27815895	(142990084)	C	AluSx	SINE/Alu	(2)	310	1	3357641
720	19.3	9.3	0.0	chr6	27830771	27830936	(142975043)	+	AluJr	SINE/Alu	1	183	(129)	3357669
230	2.6	20.8	0.0	chr6	27873483	27873520	(142932459)	+	LTR10B1	LTR/ERV1	210	257	(290)	3357740
2336	7.5	0.3	5.3	chr6	28080374	28080692	(142725287)	C	AluSc8	SINE/Alu	(8)	303	1	3358053
187	30.7	7.3	8.2	chr6	28589183	28589292	(142216687)	C	L3b	LINE/CR1	(531)	4701	4593	3358868
666	0.0	0.0	0.0	chr6	28589379	28589450	(142216529)	+	tRNA-Gln-CAA	tRNA	1	72	(3)	3358869
4542	8.9	0.2	2.2	chr6	28776602	28777224	(142028755)	+	LTR71B	LTR/ERV1	1	610	(0)	3359192
857	15.7	2.5	1.9	chr6	30171502	30171663	(140634316)	C	MER5A1	DNA/hAT-Charlie	(1)	165	3	3361190
214	30.8	0.0	0.0	chr6	30213982	30214046	(140591933)	C	MIRc	SINE/MIR	(114)	154	90	3361269
13	22.5	2.0	3.9	chr6	30345413	30345462	(140460517)	+	G-rich	Low_complexity	1	51	(0)	3361461
12	30.0	0.0	4.8	chr6	30720277	30720338	(140085641)	+	(CCCG)n	Simple_repeat	1	62	(0)	3362083
1405	13.4	0.8	8.6	chr6	30721887	30722155	(140083824)	+	AluJr	SINE/Alu	40	287	(25)	3362084
9746	11.5	6.1	8.6	chr6	30859284	30860464	(139945515)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1631	541	3362393
2066	7.9	7.4	0.4	chr6	31542686	31542962	(139263017)	C	AluSx1	SINE/Alu	(14)	298	1	3363472
14	9.3	0.0	0.0	chr6	31665063	31665085	(139140894)	+	(ACA)n	Simple_repeat	1	23	(0)	3363690
15	21.8	2.7	0.0	chr6	31739966	31740002	(139065977)	+	(GC)n	Simple_repeat	1	38	(0)	3363802
16	0.0	0.0	0.0	chr6	31898644	31898660	(138907319)	+	(T)n	Simple_repeat	1	17	(0)	3364123
19	8.9	3.5	8.5	chr6	31902313	31902418	(138903561)	+	(CGCCCG)n	Simple_repeat	1	100	(0)	3364127
386	30.8	10.7	0.0	chr6	32113840	32113998	(138691981)	C	MIRb	SINE/MIR	(76)	192	15	3364404
14	25.2	2.1	0.0	chr6	32130213	32130259	(138675720)	+	G-rich	Low_complexity	1	48	(0)	3364426
24	9.6	2.1	4.1	chr6	32150512	32150559	(138655420)	+	(GGC)n	Simple_repeat	1	49	(0)	3364473
2342	19.3	0.0	1.4	chr6	32255572	32255986	(138549993)	C	L1PA12	LINE/L1	(6566)	415	7	3364643
13	13.6	10.0	1.8	chr6	33117372	33117421	(137688558)	+	(GGAGGAT)n	Simple_repeat	1	55	(0)	3365861
25	20.6	0.0	3.1	chr6	33200310	33200374	(137605605)	+	(CCG)n	Simple_repeat	1	65	(0)	3365969
546	23.4	17.9	0.5	chr6	33586146	33586338	(137219641)	C	MIR	SINE/MIR	(11)	251	18	3366782
439	23.2	9.4	1.9	chr6	33711085	33711184	(137094795)	C	MER5B	DNA/hAT-Charlie	(2)	176	64	3367014
798	10.1	4.6	3.9	chr6	33711185	33711313	(137094666)	C	AluJo	SINE/Alu	(182)	130	1	3367015
439	23.2	9.4	1.9	chr6	33711314	33711370	(137094609)	C	MER5B	DNA/hAT-Charlie	(115)	63	7	3367014
18	12.2	0.0	0.0	chr6	33813095	33813121	(136992858)	+	(G)n	Simple_repeat	1	27	(0)	3367155
969	24.6	8.4	10.7	chr6	33815658	33816145	(136989834)	C	LTR33A	LTR/ERVL	(2)	518	43	3367158
269	23.0	7.4	1.7	chr6	34131339	34131453	(136674526)	C	Charlie16a	DNA/hAT-Charlie	(144)	198	77	3367689
12	26.2	0.0	2.5	chr6	34131902	34131941	(136674038)	+	(TCCCC)n	Simple_repeat	1	40	(0)	3367690
765	23.9	15.3	0.8	chr6	34200706	34200950	(136605029)	C	MLT1J	LTR/ERVL-MaLR	(159)	353	67	3367839
300	33.3	6.7	0.6	chr6	34200996	34201090	(136604889)	C	L2b	LINE/L2	(528)	2891	2790	3367834
20	6.8	0.0	0.0	chr6	34237683	34237713	(136568266)	+	(GAGCCC)n	Simple_repeat	1	31	(0)	3367938
1033	18.2	0.0	6.1	chr6	35177028	35177225	(135628754)	C	AluJo	SINE/Alu	(12)	300	115	3369852
394	27.2	0.0	3.4	chr6	35177516	35177633	(135628346)	+	MLT1L	LTR/ERVL-MaLR	374	487	(123)	3369853
12	31.3	0.0	0.0	chr6	35259735	35259781	(135546198)	+	(GCGG)n	Simple_repeat	1	47	(0)	3369993
964	20.9	8.7	1.4	chr6	35499324	35499546	(135306433)	+	MIR	SINE/MIR	13	253	(9)	3370492
899	20.1	2.6	0.0	chr6	36302668	36302851	(134503128)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	3372201
506	23.3	0.8	9.2	chr6	36874322	36874463	(133931516)	+	L2c	LINE/L2	3258	3387	(0)	3373481
17	27.3	1.6	1.6	chr6	36986054	36986116	(133819863)	+	(AGCTCC)n	Simple_repeat	1	64	(0)	3373669
14	29.1	2.5	3.7	chr6	36986351	36986430	(133819549)	+	G-rich	Low_complexity	1	82	(0)	3373670
701	27.9	10.3	0.9	chr6	37225670	37225897	(133580082)	+	MLT1J	LTR/ERVL-MaLR	3	254	(258)	3374275
294	22.1	1.2	1.6	chr6	37225949	37226030	(133579949)	+	MLT1J	LTR/ERVL-MaLR	353	433	(15)	3374275
14	25.3	2.0	2.0	chr6	37649091	37649139	(133156840)	+	(CGG)n	Simple_repeat	1	50	(0)	3375062
347	24.1	13.8	0.0	chr6	37778025	37778136	(133027843)	C	MIRc	SINE/MIR	(13)	255	126	3375340
188	9.3	21.8	0.0	chr6	37778112	37778154	(133027825)	C	MIR3	SINE/MIR	(61)	147	93	3375341
16	0.0	0.0	0.0	chr6	38703318	38703334	(132102645)	+	(A)n	Simple_repeat	1	17	(0)	3376822
369	25.4	7.1	3.0	chr6	38865688	38865821	(131940158)	C	MLT1J	LTR/ERVL-MaLR	(367)	145	6	3377114
185	32.7	0.0	0.0	chr6	38865822	38865873	(131940106)	+	L2b	LINE/L2	3306	3357	(18)	3377108
615	22.4	9.5	4.3	chr6	39344804	39345013	(131460966)	+	MLT1J	LTR/ERVL-MaLR	33	254	(258)	3377920
13	23.3	0.0	2.4	chr6	39725496	39725537	(131080442)	+	G-rich	Low_complexity	1	42	(0)	3378438
1946	10.2	1.9	1.2	chr6	39725700	39725953	(131080026)	+	AluJb	SINE/Alu	1	256	(56)	3378439
15	4.7	0.0	0.0	chr6	40164350	40164371	(130641608)	+	(AGAA)n	Simple_repeat	1	22	(0)	3379017
935	24.0	6.4	17.0	chr6	40398911	40399423	(130406556)	+	LTR33A	LTR/ERVL	8	455	(65)	3379385
253	34.0	3.0	2.5	chr6	41023010	41023172	(129782807)	C	LTR67B	LTR/ERVL	(35)	585	422	3380503
547	18.6	2.4	5.7	chr6	41023244	41023399	(129782580)	C	LTR67B	LTR/ERVL	(437)	183	31	3380503
1272	18.8	0.8	5.8	chr6	41023588	41023863	(129782116)	C	MLT1A0	LTR/ERVL-MaLR	(103)	262	1	3380504
14	15.6	0.0	0.0	chr6	41073192	41073220	(129732759)	+	(GAGCC)n	Simple_repeat	1	29	(0)	3380581
15	12.7	0.0	5.3	chr6	41073547	41073584	(129732395)	+	(CTCCCCG)n	Simple_repeat	1	38	(0)	3380582
13	15.9	0.0	9.8	chr6	41073761	41073811	(129732168)	+	(CGCC)n	Simple_repeat	1	51	(0)	3380583
2142	11.6	0.3	0.0	chr6	42050104	42050397	(128755582)	+	AluSz	SINE/Alu	6	300	(12)	3382426
1026	19.8	5.3	0.5	chr6	42318613	42318825	(128487154)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	3383003
836	30.8	6.5	1.6	chr6	42318918	42319095	(128486884)	+	MLT1J2	LTR/ERVL-MaLR	64	256	(192)	3383004
865	18.0	8.1	4.0	chr6	42319096	42319321	(128486658)	C	MER106A	DNA/hAT-Charlie	(0)	236	1	3383005
12	43.1	0.0	0.0	chr6	42452222	42452296	(128353683)	+	G-rich	Low_complexity	1	75	(0)	3383278
219	20.0	6.2	0.0	chr6	42563604	42563648	(128242331)	C	L2a	LINE/L2	(0)	3426	3379	3383531
352	18.5	0.0	0.0	chr6	42563659	42563723	(128242256)	C	L2a	LINE/L2	(24)	3402	3338	3383531
12	11.5	3.3	3.2	chr6	43076534	43076563	(127729416)	+	(CTG)n	Simple_repeat	1	31	(0)	3384639
1934	26.5	8.5	0.9	chr6	43229621	43229933	(127576046)	+	L2a	LINE/L2	2402	2748	(671)	3384957
14	17.7	0.0	0.0	chr6	43243536	43243567	(127562412)	+	G-rich	Low_complexity	1	32	(0)	3384993
28	8.9	6.3	3.0	chr6	43629163	43629225	(127176754)	+	(CCG)n	Simple_repeat	1	67	(0)	3385709
23	22.1	1.7	0.0	chr6	43770967	43771024	(127034955)	+	GA-rich	Low_complexity	1	59	(0)	3385990
13	23.2	2.4	0.0	chr6	43771190	43771230	(127034749)	+	(AGCCGG)n	Simple_repeat	1	42	(0)	3385991
16	14.8	0.0	4.9	chr6	44002458	44002498	(126803481)	+	(CCCCG)n	Simple_repeat	1	41	(0)	3386394
30	0.0	0.0	0.0	chr6	44002767	44002794	(126803185)	+	(GCG)n	Simple_repeat	1	28	(0)	3386395
378	29.5	6.5	1.5	chr6	44052378	44052508	(126753471)	C	LTR88c	LTR/Gypsy?	(350)	487	350	3386479
1324	28.7	11.8	4.7	chr6	44052538	44052761	(126753218)	+	LTR67B	LTR/ERVL	1	242	(378)	3386480
41	0.0	0.0	0.0	chr6	44052762	44052798	(126753181)	+	(TGT)n	Simple_repeat	1	37	(0)	3386481
20	6.5	0.0	2.9	chr6	44223992	44224025	(126581954)	+	(TGGGGA)n	Simple_repeat	1	34	(0)	3386814
191	29.6	10.8	6.5	chr6	47317311	47317433	(123488546)	C	L2c	LINE/L2	(15)	3372	3244	3391560
556	20.9	7.6	2.2	chr6	47317494	47317630	(123488349)	+	MLT1J	LTR/ERVL-MaLR	66	210	(302)	3391561
208	40.2	1.6	7.5	chr6	47317773	47317971	(123488008)	+	L2c	LINE/L2	2704	2890	(529)	3391562
262	29.0	12.7	1.5	chr6	51818427	51818559	(118987420)	+	MIRb	SINE/MIR	4	153	(115)	3397609
1012	27.7	11.3	2.6	chr6	51818569	51818913	(118987066)	+	MLT1J	LTR/ERVL-MaLR	1	379	(133)	3397610
2993	0.3	0.0	0.3	chr6	52995620	52995951	(117810028)	+	7SK	RNA	1	331	(0)	3399374
1248	25.8	6.2	3.4	chr6	61243072	61243480	(109562499)	C	MLT1J1	LTR/ERVL-MaLR	(0)	444	24	3408109
29	12.0	0.0	0.0	chr6	63058631	63058677	(107747302)	+	(TTTA)n	Simple_repeat	1	47	(0)	3409961
305	20.3	15.8	2.0	chr6	63058685	63058842	(107747137)	+	MLT1L	LTR/ERVL-MaLR	1	196	(316)	3409962
1714	27.1	5.9	3.2	chr6	63598416	63598975	(107207004)	C	LTR33C	LTR/ERVL	(29)	600	25	3410846
15	20.2	0.0	0.0	chr6	69232974	69233007	(101572972)	+	(GCT)n	Simple_repeat	1	34	(0)	3417699
1242	29.0	5.0	0.8	chr6	69630883	69631281	(101174698)	+	MLT1J2	LTR/ERVL-MaLR	9	425	(23)	3418184
17	18.6	0.0	0.0	chr6	70956192	70956228	(99849751)	+	(GCGGCT)n	Simple_repeat	1	37	(0)	3419938
17471	5.8	0.3	0.0	chr6	73310508	73312783	(97493196)	C	L1PA5	LINE/L1	(1805)	4341	2075	3423115
2387	9.9	0.3	0.0	chr6	73678608	73678911	(97127068)	C	AluSq2	SINE/Alu	(8)	305	1	3424051
873	22.9	9.3	0.5	chr6	73678943	73679157	(97126822)	C	MLT1J	LTR/ERVL-MaLR	(208)	304	69	3424047
30	30.4	2.2	2.8	chr6	75601788	75601926	(95204053)	+	(GGC)n	Simple_repeat	1	142	(0)	3426464
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
16	19.9	0.0	2.4	chr6	79234607	79234648	(91571331)	+	(GCTGCC)n	Simple_repeat	1	42	(0)	3430987
381	16.9	11.0	0.0	chr6	79420124	79420212	(91385767)	+	MLT1J1	LTR/ERVL-MaLR	28	127	(317)	3431202
360	26.9	2.9	5.0	chr6	79420330	79420470	(91385509)	+	MLT1J1	LTR/ERVL-MaLR	281	418	(26)	3431202
311	28.2	9.2	10.6	chr6	79631261	79631458	(91174521)	+	L1M4b	LINE/L1	293	487	(6380)	3431532
1700	18.5	4.6	0.0	chr6	80179300	80179628	(90626351)	+	MER2	DNA/TcMar-Tigger	1	345	(0)	3432322
268	23.2	0.0	7.4	chr6	80179821	80179911	(90626068)	C	MLT1J	LTR/ERVL-MaLR	(348)	164	42	3432323
266	33.1	3.5	6.8	chr6	83067337	83067482	(87738497)	+	MIR3	SINE/MIR	44	184	(24)	3436014
12	15.8	0.0	3.3	chr6	83859587	83859616	(86946363)	+	(CTCC)n	Simple_repeat	1	30	(0)	3437073
20	24.0	2.4	4.6	chr6	85643596	85643680	(85162299)	+	(CCCCG)n	Simple_repeat	1	87	(0)	3439346
13	10.4	2.9	5.6	chr6	85643759	85643793	(85162186)	+	(CGCGCC)n	Simple_repeat	1	36	(0)	3439347
13	20.0	2.0	5.8	chr6	87156134	87156184	(83649795)	+	(CGCCTC)n	Simple_repeat	1	52	(0)	3441138
655	35.1	7.9	5.2	chr6	87590481	87590888	(83215091)	C	L2b	LINE/L2	(33)	3342	2923	3441830
983	27.9	8.7	5.3	chr6	87815244	87815541	(82990438)	+	ERVL-E-int	LTR/ERVL	322	621	(5046)	3442268
245	18.0	3.8	2.0	chr6	87815558	87815608	(82990371)	C	MLT1J	LTR/ERVL-MaLR	(0)	562	511	3442270
695	23.2	7.7	0.6	chr6	87815591	87815784	(82990195)	C	MLT1J	LTR/ERVL-MaLR	(304)	208	19	3442270
240	27.6	3.8	12.4	chr6	87815788	87815932	(82990047)	C	L2c	LINE/L2	(889)	2530	2399	3442256
20	16.6	0.0	0.0	chr6	88963742	88963782	(81842197)	+	(CGCCC)n	Simple_repeat	1	41	(0)	3443858
15	17.9	2.2	4.4	chr6	89690204	89690248	(81115731)	+	A-rich	Low_complexity	1	44	(0)	3445194
249	24.7	5.1	2.1	chr6	90193035	90193129	(80612850)	+	MLT1J1	LTR/ERVL-MaLR	64	161	(283)	3446019
1917	15.7	0.3	8.4	chr6	90193171	90193587	(80612392)	+	MLT1B	LTR/ERVL-MaLR	1	383	(7)	3446020
535	29.0	7.8	5.7	chr6	98800961	98801428	(72004551)	+	LTR33A	LTR/ERVL	27	495	(36)	3456725
238	28.8	10.4	3.9	chr6	104349507	104349712	(66456267)	+	L1M5	LINE/L1	5372	5592	(532)	3463849
617	28.8	0.0	0.0	chr6	104349808	104349946	(66456033)	C	LTR33B	LTR/ERVL	(285)	218	80	3463850
13	23.8	2.2	2.1	chr6	104859847	104859892	(65946087)	+	(CCG)n	Simple_repeat	1	47	(0)	3464541
11	10.6	0.0	10.5	chr6	104941037	104941074	(65864905)	+	G-rich	Low_complexity	1	38	(0)	3464694
516	30.4	6.9	5.0	chr6	105449608	105450064	(65355915)	C	MLT1J	LTR/ERVL-MaLR	(44)	468	3	3465442
670	31.0	13.4	1.0	chr6	105450120	105450602	(65355377)	+	MLT1N2	LTR/ERVL-MaLR	1	552	(10)	3465443
18	10.7	0.0	0.0	chr6	106361110	106361139	(64444840)	+	(CCT)n	Simple_repeat	1	30	(0)	3466799
325	26.0	10.2	7.8	chr6	106361456	106361671	(64444308)	C	MIRc	SINE/MIR	(7)	261	49	3466800
14	19.9	3.5	5.1	chr6	106975331	106975391	(63830588)	+	G-rich	Low_complexity	1	60	(0)	3467862
14	20.5	2.6	0.0	chr6	107114957	107114995	(63690984)	+	(CCCCCT)n	Simple_repeat	1	40	(0)	3468217
664	22.6	2.7	0.0	chr6	107716721	107716870	(63089109)	+	MLT1J	LTR/ERVL-MaLR	43	178	(334)	3469261
719	15.9	15.8	2.9	chr6	108075291	108075410	(62730569)	+	MER3	DNA/hAT-Charlie	1	145	(64)	3469904
1139	27.1	8.1	5.5	chr6	108708687	108709177	(62096802)	C	ERV3-16A3_I-int	LTR/ERVL	(205)	5021	4517	3471015
680	18.8	10.5	4.5	chr6	108709178	108709400	(62096579)	+	LTR16A2	LTR/ERVL	258	495	(0)	3471014
15	18.9	7.8	2.9	chr6	109382076	109382139	(61423840)	+	(CCGC)n	Simple_repeat	1	69	(0)	3472067
21	9.4	0.0	0.0	chr6	109455775	109455808	(61350171)	+	(GCGGGG)n	Simple_repeat	1	34	(0)	3472184
184	30.8	0.0	4.4	chr6	111869967	111870034	(58935945)	+	L2c	LINE/L2	3254	3318	(69)	3476283
943	26.9	7.6	5.3	chr6	111870040	111870475	(58935504)	+	MLT1J2	LTR/ERVL-MaLR	2	448	(0)	3476289
200	31.2	6.6	3.9	chr6	112412088	112412227	(58393752)	+	MIRb	SINE/MIR	25	163	(99)	3477083
316	24.6	5.4	5.4	chr6	112412229	112412357	(58393622)	+	MLT1J	LTR/ERVL-MaLR	1	129	(383)	3477084
20	15.5	3.9	1.9	chr6	113970321	113970372	(56835607)	+	G-rich	Low_complexity	1	54	(0)	3479420
20	33.8	0.9	3.5	chr6	116279178	116279291	(54526688)	+	(TCC)n	Simple_repeat	1	115	(0)	3482344
15	12.8	2.8	2.7	chr6	116279371	116279406	(54526573)	+	(CCTCAG)n	Simple_repeat	1	37	(0)	3482345
2138	2.1	0.4	0.0	chr6	116668860	116669093	(54136886)	C	AluY	SINE/Alu	(8)	303	69	3482906
37	0.0	0.0	0.0	chr6	116681112	116681145	(54124834)	+	(CCG)n	Simple_repeat	1	34	(0)	3482935
343	22.1	17.5	0.0	chr6	121319437	121319540	(49486439)	+	MLT1J	LTR/ERVL-MaLR	22	147	(365)	3488786
57	41.1	0.0	1.4	chr6	125301977	125302258	(45503721)	+	(CCTCCC)n	Simple_repeat	1	282	(0)	3494128
404	20.2	6.6	3.5	chr6	130615941	130616055	(40189924)	+	MLT1J	LTR/ERVL-MaLR	48	204	(308)	3501155
4889	20.0	6.1	0.9	chr6	131918253	131919316	(38886663)	+	L1PA13	LINE/L1	17	1139	(5646)	3503105
12	27.1	0.0	0.0	chr6	137044331	137044370	(33761609)	+	(GCACCGC)n	Simple_repeat	1	40	(0)	3510893
19	19.3	0.0	0.0	chr6	137044663	137044704	(33761275)	+	(CAGCAG)n	Simple_repeat	1	42	(0)	3510894
349	28.4	11.2	9.4	chr6	137323955	137324390	(33481589)	+	MLT1J2	LTR/ERVL-MaLR	4	448	(0)	3511316
41	2.6	0.0	0.0	chr6	143061109	143061148	(27744831)	+	(TG)n	Simple_repeat	1	40	(0)	3519337
2270	9.8	0.7	0.3	chr6	144095894	144096180	(26709799)	C	AluYc	SINE/Alu	(11)	288	1	3520847
512	24.8	3.5	1.4	chr6	144234313	144234451	(26571528)	+	MER5B	DNA/hAT-Charlie	19	160	(18)	3521077
1439	26.7	6.8	9.1	chr6	144234460	144235171	(26570808)	+	MER21C	LTR/ERVL	57	817	(121)	3521078
14	8.9	0.0	0.0	chr6	145964100	145964123	(24841856)	+	(CCTC)n	Simple_repeat	1	24	(0)	3523417
1134	25.7	7.4	8.1	chr6	149217689	149218082	(21587897)	+	MLT1J	LTR/ERVL-MaLR	2	392	(120)	3528077
14	5.0	0.0	0.0	chr6	149718040	149718060	(21087919)	+	(GCC)n	Simple_repeat	1	21	(0)	3529015
17	31.7	2.0	4.0	chr6	149749714	149749812	(21056167)	+	(GCGGCG)n	Simple_repeat	1	101	(0)	3529085
228	27.2	3.6	3.6	chr6	150079870	150079953	(20726026)	C	MLT1J2	LTR/ERVL-MaLR	(305)	143	60	3529629
586	19.3	2.6	0.9	chr6	150079889	150080003	(20725976)	C	LTR67B	LTR/ERVL	(473)	147	31	3529630
684	27.2	8.6	4.9	chr6	150878918	150879160	(19926819)	C	MLT1J	LTR/ERVL-MaLR	(259)	253	1	3530906
2282	8.8	1.7	0.3	chr6	150879292	150879586	(19926393)	C	AluSx1	SINE/Alu	(12)	300	2	3530909
23	25.1	2.6	1.3	chr6	151391001	151391077	(19414902)	+	(CCTC)n	Simple_repeat	1	79	(0)	3531913
24	21.4	3.0	1.4	chr6	151391468	151391582	(19414397)	+	(GCG)n	Simple_repeat	1	116	(0)	3531914
1952	27.9	7.3	0.5	chr6	152905561	152906144	(17899835)	C	LTR33C	LTR/ERVL	(2)	627	1	3534177
13	12.7	2.6	5.1	chr6	152982872	152982909	(17823070)	+	(GGCGCT)n	Simple_repeat	1	39	(0)	3534290
49	0.0	0.0	0.0	chr6	154570085	154570126	(16235853)	+	(CA)n	Simple_repeat	1	42	(0)	3536629
32	21.5	5.6	3.0	chr6	154995190	154995314	(15810665)	+	G-rich	Low_complexity	1	132	(0)	3537437
12	32.1	2.8	1.4	chr6	157021871	157021941	(13784038)	+	(CGTCCCG)n	Simple_repeat	1	73	(0)	3540328
854	25.5	10.7	5.8	chr6	157193392	157193898	(13612081)	C	MLT1H2	LTR/ERVL-MaLR	(12)	567	1	3540534
637	29.7	4.9	1.7	chr6	157193920	157194217	(13611762)	C	L1M5	LINE/L1	(557)	5567	5260	3540535
1404	24.6	11.4	3.0	chr6	157789805	157790269	(13015710)	C	MLT1J	LTR/ERVL-MaLR	(3)	509	1	3541477
19	17.9	0.0	4.2	chr6	157981785	157981832	(12824147)	+	GA-rich	Low_complexity	1	48	(0)	3541773
659	23.1	4.4	0.0	chr6	158819939	158820111	(11985868)	+	MER5A	DNA/hAT-Charlie	2	182	(7)	3543168
1322	26.1	9.6	4.8	chr6	159074185	159074647	(11731332)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	23	3543620
33	0.0	0.0	0.0	chr6	159727375	159727405	(11078574)	+	(GGCGGGA)n	Simple_repeat	1	31	(0)	3544510
22	22.7	3.4	4.3	chr6	159727409	159727497	(11078482)	+	(GGCGC)n	Simple_repeat	1	92	(0)	3544511
33	25.2	1.9	6.2	chr6	160348258	160348415	(10457564)	+	(GGCGGCG)n	Simple_repeat	1	161	(0)	3545347
15	17.5	2.0	5.8	chr6	160348644	160348694	(10457285)	+	(GCCCGCG)n	Simple_repeat	1	52	(0)	3545348
197	31.9	6.3	7.8	chr6	162493834	162493962	(8312017)	+	MIR3	SINE/MIR	60	186	(22)	3548247
1305	23.8	15.1	2.0	chr6	162494061	162494596	(8311383)	+	MLT2F	LTR/ERVL	1	618	(45)	3548248
731	27.6	18.5	5.2	chr6	163132982	163133363	(7672616)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	5	3549065
12	26.0	1.7	4.9	chr6	166565688	166565747	(4240232)	+	G-rich	Low_complexity	1	61	(0)	3553402
441	17.1	3.5	0.0	chr6	166586892	166586986	(4218993)	+	MLT1J2	LTR/ERVL-MaLR	65	170	(342)	3553417
396	30.3	3.3	1.4	chr6	166587040	166587186	(4218793)	+	MLT1J2	LTR/ERVL-MaLR	254	403	(45)	3553417
230	30.0	15.0	1.9	chr6	166821574	166822144	(3983835)	+	L2a	LINE/L2	2151	2809	(610)	3553670
456	28.7	4.8	3.1	chr6	167148491	167148652	(3657327)	+	MIR	SINE/MIR	31	195	(67)	3554086
264	38.9	1.7	2.1	chr7	333738	335303	(159010670)	+	(CACGCA)n	Simple_repeat	1	1592	(0)	3558214
183	25.9	1.8	5.3	chr7	379459	379515	(158966458)	+	MIRc	SINE/MIR	111	165	(103)	3558265
14	17.6	0.0	0.0	chr7	726723	726754	(158619219)	+	(GGTGGC)n	Simple_repeat	1	32	(0)	3558809
2204	11.4	0.0	0.0	chr7	875748	876046	(158469927)	C	AluSx1	SINE/Alu	(13)	299	1	3559023
279	17.0	13.7	1.1	chr7	1425575	1425663	(157920310)	+	MLT1C	LTR/ERVL-MaLR	350	451	(16)	3559896
361	16.0	5.7	2.9	chr7	1425707	1425809	(157920164)	+	MLT1J	LTR/ERVL-MaLR	71	176	(336)	3559897
1834	14.8	2.3	1.4	chr7	1569486	1569782	(157776191)	+	AluJr	SINE/Alu	1	300	(12)	3560095
12	14.3	4.8	4.5	chr7	1569883	1569924	(157776049)	+	(CCTCGG)n	Simple_repeat	1	44	(0)	3560096
210	25.5	0.0	0.0	chr7	1715202	1715248	(157630725)	C	L2a	LINE/L2	(2)	3424	3378	3560361
739	16.6	8.3	8.2	chr7	2353582	2353776	(156992197)	C	L1MB3	LINE/L1	(46)	6137	5933	3561249
652	13.9	0.2	0.1	chr7	2353794	2353900	(156992073)	C	FLAM_C	SINE/Alu	(30)	103	10	3561251
297	20.5	10.2	4.2	chr7	2528814	2528977	(156816996)	C	MIR1_Amn	SINE/MIR	(68)	200	33	3561580
12	5.5	0.0	0.0	chr7	2874031	2874049	(156471924)	+	(ACA)n	Simple_repeat	1	19	(0)	3562187
15	13.1	2.0	8.0	chr7	4682138	4682186	(154663787)	+	G-rich	Low_complexity	1	50	(0)	3565384
191	19.3	10.9	3.4	chr7	4792732	4792790	(154553183)	C	OldhAT1	DNA/hAT-Ac	(152)	2696	2633	3565554
2506	8.5	1.4	3.3	chr7	4830571	4830596	(154515377)	+	L1PA13	LINE/L1	5805	5825	(338)	3565613
12	29.4	1.6	3.2	chr7	5513497	5513558	(153832415)	+	(GGTCGG)n	Simple_repeat	1	63	(0)	3567204
230	33.6	15.0	3.8	chr7	5513927	5514323	(153831650)	+	L2a	LINE/L2	2921	3426	(0)	3567205
246	9.3	0.0	0.0	chr7	5561969	5562011	(153783962)	+	L1MB3	LINE/L1	6134	6176	(7)	3567343
243	28.4	1.5	0.0	chr7	5562096	5562162	(153783811)	C	LTR33A_	LTR/ERVL	(381)	150	83	3567344
181	32.3	0.0	1.5	chr7	5562540	5562605	(153783368)	C	L2a	LINE/L2	(346)	3080	3016	3567345
2539	4.2	0.3	2.6	chr7	6104073	6104380	(153241593)	C	AluSx3	SINE/Alu	(10)	301	1	3568622
1421	16.9	1.0	10.8	chr7	6104381	6104411	(153241562)	+	AluJo	SINE/Alu	271	300	(12)	3568621
299	19.5	7.2	0.0	chr7	6358913	6358989	(152986984)	+	MLT1J-int	LTR/ERVL-MaLR	1253	1335	(52)	3569180
717	28.1	17.5	7.3	chr7	6359114	6359319	(152986654)	+	MLT1J	LTR/ERVL-MaLR	4	229	(283)	3569180
2310	11.4	0.0	0.3	chr7	6359320	6359625	(152986348)	C	AluSc	SINE/Alu	(4)	305	1	3569181
29	20.3	0.9	7.5	chr7	6503692	6503797	(152842176)	+	G-rich	Low_complexity	1	107	(0)	3569531
282	22.6	8.9	1.9	chr7	6546953	6547056	(152798917)	+	MLT1J1	LTR/ERVL-MaLR	35	146	(298)	3569637
18	19.9	2.2	0.0	chr7	6730018	6730063	(152615910)	+	(GGCGGA)n	Simple_repeat	1	47	(0)	3570020
542	28.9	10.7	8.9	chr7	7117867	7118189	(152227784)	+	MLT1J	LTR/ERVL-MaLR	1	322	(190)	3570662
1848	16.6	1.0	0.3	chr7	7118190	7118485	(152227488)	+	AluJo	SINE/Alu	5	302	(10)	3570663
309	30.2	10.4	6.4	chr7	7969024	7969225	(151376748)	C	L1M4b	LINE/L1	(6249)	618	408	3571874
14	15.4	5.6	0.0	chr7	12686828	12686863	(146659110)	+	(GGCG)n	Simple_repeat	1	38	(0)	3577694
13	21.9	2.3	2.2	chr7	16646094	16646137	(142699836)	+	G-rich	Low_complexity	1	45	(0)	3582782
32	3.0	0.0	0.0	chr7	16646203	16646236	(142699737)	+	(CTG)n	Simple_repeat	1	34	(0)	3582783
11	21.2	6.8	0.0	chr7	20784367	20784410	(138561563)	+	(CGCTGT)n	Simple_repeat	1	47	(0)	3588256
22	12.6	2.2	2.2	chr7	20784401	20784445	(138561528)	+	(GCC)n	Simple_repeat	1	46	(0)	3588257
12	20.1	2.9	0.0	chr7	23182167	23182200	(136163773)	+	(GCA)n	Simple_repeat	1	35	(0)	3591849
19	24.7	0.0	0.0	chr7	23211438	23211478	(136134495)	+	A-rich	Low_complexity	1	41	(0)	3591913
343	25.2	4.7	3.1	chr7	23211671	23211809	(136134164)	+	LTR33C	LTR/ERVL	38	224	(279)	3591914
4404	16.4	4.0	3.5	chr7	23211846	23212623	(136133350)	+	LTR39	LTR/ERV1	1	782	(1)	3591915
15	19.3	0.0	4.4	chr7	23469603	23469647	(135876326)	+	G-rich	Low_complexity	1	45	(0)	3592399
13	24.9	4.6	2.9	chr7	23474085	23474149	(135871824)	+	(GCCGC)n	Simple_repeat	1	68	(0)	3592403
709	29.4	5.6	4.7	chr7	24418981	24419372	(134926601)	C	MLT1J	LTR/ERVL-MaLR	(21)	423	59	3593844
375	23.4	21.4	0.0	chr7	25894112	25894265	(133451708)	C	MIRb	SINE/MIR	(59)	209	14	3596084
1100	22.9	12.1	0.6	chr7	25894358	25894700	(133451273)	+	MLT1J2	LTR/ERVL-MaLR	46	433	(15)	3596085
412	22.4	5.3	0.0	chr7	26151724	26151830	(133194143)	C	MIRb	SINE/MIR	(57)	211	99	3596516
13	12.5	0.0	0.0	chr7	27235233	27235258	(132110715)	+	(GGGTG)n	Simple_repeat	1	26	(0)	3598155
840	26.1	19.3	2.4	chr7	28002706	28003125	(131342848)	+	MLT1J	LTR/ERVL-MaLR	1	508	(4)	3599345
571	30.6	0.7	2.0	chr7	29254746	29254940	(130091033)	C	LTR67B	LTR/ERVL	(425)	195	1	3601302
57	1.9	0.0	0.0	chr7	30671803	30671857	(128674116)	+	(TGA)n	Simple_repeat	1	55	(0)	3603457
21	21.9	4.0	3.8	chr7	30671858	30671932	(128674041)	+	GA-rich	Low_complexity	1	75	(0)	3603458
187	28.1	3.0	0.0	chr7	30672157	30672220	(128673753)	+	L2c	LINE/L2	3095	3160	(227)	3603459
1215	27.4	2.5	7.0	chr7	31037818	31038245	(128307728)	C	MLT1J	LTR/ERVL-MaLR	(4)	508	101	3604052
231	14.6	0.0	4.7	chr7	31038212	31038254	(128307719)	C	LTR67B	LTR/ERVL	(500)	120	80	3604053
510	33.3	10.1	4.9	chr7	31038271	31038963	(128307010)	+	L2b	LINE/L2	2643	3375	(0)	3604050
814	22.2	16.3	1.5	chr7	31115250	31115582	(128230391)	C	Arthur1B	DNA/hAT-Tip100	(0)	1225	834	3604170
14	22.9	0.0	6.9	chr7	32957516	32957573	(126388400)	+	(GCCGC)n	Simple_repeat	1	58	(0)	3607085
571	15.2	0.0	1.0	chr7	33063525	33063624	(126282349)	C	MER34C2	LTR/ERV1	(0)	555	457	3607296
1271	26.6	4.9	2.1	chr7	34839586	34840003	(124505970)	C	MLT1J1	LTR/ERVL-MaLR	(10)	434	5	3609817
2145	28.4	11.8	3.3	chr7	35359124	35359473	(123986500)	+	L1M5	LINE/L1	4975	5333	(813)	3610540
702	27.1	4.1	6.2	chr7	35359478	35359752	(123986221)	+	MLT1J	LTR/ERVL-MaLR	1	269	(243)	3610542
15	6.3	9.1	0.0	chr7	35359847	35359879	(123986094)	+	(ATTTT)n	Simple_repeat	1	36	(0)	3610543
1303	25.9	7.2	3.4	chr7	36765494	36765909	(122580064)	C	MLT1J2	LTR/ERVL-MaLR	(5)	443	11	3612792
203	28.6	4.5	0.0	chr7	36765910	36765993	(122579980)	C	L2c	LINE/L2	(299)	3088	3001	3612793
356	25.0	4.3	0.9	chr7	36789271	36789383	(122556590)	C	LTR33B	LTR/ERVL	(386)	117	1	3612832
185	28.4	5.0	5.9	chr7	36789499	36789599	(122556374)	+	MIRb	SINE/MIR	163	262	(6)	3612833
431	24.1	8.4	0.3	chr7	36872043	36872163	(122473810)	+	MLT1I	LTR/ERVL-MaLR	34	166	(245)	3612955
12	19.7	0.0	0.0	chr7	38178317	38178345	(121167628)	+	(CCCCG)n	Simple_repeat	1	29	(0)	3614739
208	33.0	4.9	0.0	chr7	38178407	38178503	(121167470)	C	MIRc	SINE/MIR	(82)	186	85	3614740
234	28.0	44.6	0.0	chr7	38491914	38492031	(120853942)	+	MIRc	SINE/MIR	81	251	(11)	3615198
1112	25.9	12.3	2.7	chr7	38492071	38492479	(120853494)	+	MLT1J	LTR/ERVL-MaLR	3	456	(56)	3615199
293	25.8	12.3	2.3	chr7	38552927	38553057	(120792916)	+	LTR33	LTR/ERVL	26	171	(344)	3615281
424	31.1	2.8	2.4	chr7	38553111	38553357	(120792616)	+	LTR33	LTR/ERVL	266	513	(2)	3615281
13	7.5	7.1	0.0	chr7	38909068	38909095	(120436878)	+	(CTCCA)n	Simple_repeat	1	30	(0)	3615797
318	31.6	5.7	2.0	chr7	39946802	39947004	(119398969)	C	MLT1J	LTR/ERVL-MaLR	(300)	212	2	3617480
17	0.0	0.0	0.0	chr7	42932702	42932720	(116413253)	+	(A)n	Simple_repeat	1	19	(0)	3621861
557	26.8	12.6	8.3	chr7	42972476	42972898	(116373075)	C	MLT1J2	LTR/ERVL-MaLR	(2)	446	3	3621921
12	21.9	3.9	3.8	chr7	44796964	44797014	(114548959)	+	(GCG)n	Simple_repeat	1	53	(0)	3624883
617	17.2	0.0	6.9	chr7	44804785	44804858	(114541115)	C	AluJr	SINE/Alu	(238)	74	1	3624899
1555	10.7	17.1	0.4	chr7	44804928	44805180	(114540793)	+	AluSq2	SINE/Alu	1	304	(9)	3624901
13	20.3	4.3	2.0	chr7	44884997	44885043	(114460930)	+	(CGCCCGC)n	Simple_repeat	1	49	(0)	3625084
28	6.4	3.9	1.9	chr7	44999656	44999706	(114346267)	+	(CCCCGTC)n	Simple_repeat	1	53	(0)	3625319
24	9.4	0.0	0.0	chr7	45267220	45267253	(114078720)	+	(TC)n	Simple_repeat	1	34	(0)	3625738
1318	22.1	12.8	0.2	chr7	47471887	47472289	(111873684)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	7	3628576
638	23.4	15.4	3.5	chr7	54674909	54675192	(104670781)	+	MLT1J1	LTR/ERVL-MaLR	1	324	(120)	3637627
6932	8.0	4.7	1.1	chr7	54675201	54676131	(104669842)	C	LTR5_Hs	LTR/ERVK	(0)	968	3	3637628
19	23.5	4.7	3.4	chr7	55572469	55572553	(103773420)	+	(GCCGC)n	Simple_repeat	1	89	(0)	3638828
2385	4.6	4.5	2.3	chr7	66114385	66114687	(93231286)	+	AluSc8	SINE/Alu	1	310	(1)	3649274
359	24.2	14.3	0.6	chr7	66413115	66413315	(92932658)	C	FLAM_C	SINE/Alu	(2)	300	45	3649935
481	14.7	12.4	2.6	chr7	66492970	66493085	(92852888)	C	AluYc	SINE/Alu	(170)	129	1	3650098
470	22.3	0.0	0.0	chr7	66493192	66493285	(92852688)	C	AluJo	SINE/Alu	(20)	292	199	3650099
462	15.1	0.0	0.0	chr7	66493312	66493384	(92852589)	C	AluJr	SINE/Alu	(195)	117	45	3650100
858	13.2	0.0	2.2	chr7	66920652	66920787	(92425186)	C	FLAM_C	SINE/Alu	(10)	133	1	3651107
43	31.3	2.8	5.0	chr7	66920826	66921080	(92424893)	+	(CA)n	Simple_repeat	1	262	(0)	3651108
12	15.8	0.0	3.3	chr7	66921065	66921094	(92424879)	+	(CACG)n	Simple_repeat	1	30	(0)	3651109
847	25.0	10.5	7.4	chr7	69041927	69042490	(90303483)	C	LTR33	LTR/ERVL	(7)	513	1	3655801
686	25.2	0.0	0.0	chr7	69502253	69502395	(89843578)	C	MLT2F	LTR/ERVL	(0)	663	521	3656834
691	25.9	13.9	0.8	chr7	69502412	69502672	(89843301)	C	MLT2F	LTR/ERVL	(362)	301	1	3656834
1443	8.3	0.9	5.7	chr7	71267688	71267917	(88078056)	C	L1PA10	LINE/L1	(2)	6166	5948	3659844
432	33.1	12.7	5.5	chr7	71267955	71268259	(88077714)	+	LTR78B	LTR/ERV1	8	348	(948)	3659845
2253	9.0	0.3	1.3	chr7	71481165	71481463	(87864510)	+	AluSz	SINE/Alu	1	296	(16)	3660281
1367	23.2	5.9	5.2	chr7	71481478	71482031	(87863942)	+	MLT2F	LTR/ERVL	4	605	(58)	3660282
12	14.6	8.2	3.8	chr7	72829973	72830021	(86515952)	+	(TTTGG)n	Simple_repeat	1	53	(0)	3663157
13	21.1	0.0	6.1	chr7	72925188	72925236	(86420737)	+	(GGCCGG)n	Simple_repeat	1	49	(0)	3663374
29	5.9	0.0	0.0	chr7	73154801	73154836	(86191137)	+	(GCA)n	Simple_repeat	1	36	(0)	3663985
18	23.9	3.5	5.6	chr7	73154956	73155042	(86190931)	+	(CCG)n	Simple_repeat	1	90	(0)	3663986
21	16.8	3.0	5.8	chr7	73557632	73557698	(85788275)	+	(CGC)n	Simple_repeat	1	69	(0)	3664904
13	17.4	5.3	5.0	chr7	73557829	73557885	(85788088)	+	(CGAGGTG)n	Simple_repeat	1	60	(0)	3664905
2151	11.9	0.3	2.2	chr7	73564131	73564441	(85781532)	C	AluSx	SINE/Alu	(0)	312	8	3664925
698	21.9	4.4	0.8	chr7	73564442	73564633	(85781340)	C	MLT1J1	LTR/ERVL-MaLR	(261)	187	2	3664924
22	11.8	0.0	0.0	chr7	73770144	73770180	(85575793)	+	(GACG)n	Simple_repeat	1	37	(0)	3665431
14	25.5	8.1	0.0	chr7	73770213	73770286	(85575687)	+	(GCTGCG)n	Simple_repeat	1	80	(0)	3665432
39	6.3	0.0	0.0	chr7	74657649	74657698	(84688275)	+	(A)n	Simple_repeat	1	50	(0)	3667694
15	11.6	0.0	3.3	chr7	74657698	74657727	(84688246)	+	(AGG)n	Simple_repeat	1	30	(0)	3667695
13	21.7	0.0	0.0	chr7	74964560	74964591	(84381382)	+	(CAG)n	Simple_repeat	1	32	(0)	3668468
1212	5.0	0.0	0.0	chr7	75528578	75528717	(83817256)	+	AluSc	SINE/Alu	2	141	(168)	3669849
11	18.4	6.7	2.1	chr7	76173947	76173991	(83171982)	+	G-rich	Low_complexity	1	48	(0)	3671491
899	24.9	6.7	2.8	chr7	76191800	76192084	(83153889)	C	MLT1J2	LTR/ERVL-MaLR	(87)	361	65	3671539
13	27.0	1.6	3.2	chr7	76201662	76201722	(83144251)	+	G-rich	Low_complexity	1	62	(0)	3671569
2060	13.4	2.9	0.0	chr7	78002472	78002770	(81343203)	+	AluSx1	SINE/Alu	1	308	(4)	3674856
332	23.7	10.4	0.9	chr7	78002806	78003048	(81342925)	+	MLT1J2	LTR/ERVL-MaLR	20	264	(184)	3674857
766	18.4	1.2	4.7	chr7	78003049	78003073	(81342900)	C	MER5A1	DNA/hAT-Charlie	(0)	166	143	3674858
2318	12.0	1.9	3.0	chr7	78003074	78003231	(81342742)	+	MER47A	DNA/TcMar-Tigger	2	164	(202)	3674859
10955	7.0	3.0	4.5	chr7	83673136	83674738	(75671235)	+	LTR12C	LTR/ERV1	2	1579	(0)	3682572
19	28.2	1.6	7.2	chr7	87876335	87876457	(71469516)	+	G-rich	Low_complexity	1	125	(0)	3687771
502	19.2	4.0	2.1	chr7	89478160	89478287	(69867686)	+	LTR33C	LTR/ERVL	30	205	(298)	3689858
345	33.8	5.6	0.8	chr7	89478309	89478561	(69867412)	+	LTR33C	LTR/ERVL	354	627	(2)	3689858
13	15.5	5.6	0.0	chr7	90403208	90403243	(68942730)	+	(TTTTG)n	Simple_repeat	1	38	(0)	3691026
268	27.4	11.7	2.4	chr7	92589482	92589673	(66756300)	C	MIR	SINE/MIR	(53)	215	2	3694134
13	16.0	0.0	3.2	chr7	94656131	94656161	(64689812)	+	(CTCCC)n	Simple_repeat	1	31	(0)	3696936
21	17.1	0.0	2.1	chr7	94656243	94656248	(64689725)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	3696937
19	5.6	5.1	2.4	chr7	94656249	94656287	(64689686)	+	(CCCCCAT)n	Simple_repeat	1	41	(0)	3696938
16	8.2	0.0	0.0	chr7	96303342	96303367	(63042606)	+	(TGGG)n	Simple_repeat	1	26	(0)	3699146
588	26.7	10.8	1.0	chr7	96303520	96303727	(63042246)	+	LTR67B	LTR/ERVL	38	268	(352)	3699147
703	24.5	3.0	5.3	chr7	96303789	96303995	(63041978)	+	LTR67B	LTR/ERVL	419	620	(0)	3699147
19	0.0	0.0	0.0	chr7	96709980	96710000	(62635973)	+	(T)n	Simple_repeat	1	21	(0)	3699743
228	29.5	14.1	0.9	chr7	97937245	97937362	(61408611)	+	MIR3	SINE/MIR	57	196	(34)	3701532
249	28.3	7.0	1.6	chr7	97937399	97937520	(61408453)	+	L1M5	LINE/L1	2424	2552	(3594)	3701533
461	19.7	9.7	3.4	chr7	97937548	97937713	(61408260)	+	MLT1J1	LTR/ERVL-MaLR	21	207	(204)	3701534
688	26.4	18.0	4.3	chr7	98467492	98467839	(60878134)	C	MLT1J1	LTR/ERVL-MaLR	(4)	440	35	3702669
24	15.4	1.5	6.1	chr7	99438954	99439018	(59906955)	+	(GGC)n	Simple_repeat	1	66	(0)	3704735
1211	12.3	0.0	0.0	chr7	99466389	99466558	(59879415)	C	AluSx	SINE/Alu	(142)	170	1	3704784
243	30.0	13.7	0.0	chr7	100088544	100088663	(59257310)	C	L2b	LINE/L2	(419)	3000	2862	3705843
261	28.7	10.3	1.4	chr7	100088687	100088829	(59257144)	C	MIRb	SINE/MIR	(87)	181	26	3705845
11	29.1	3.3	1.6	chr7	100088850	100088909	(59257064)	+	(GCCGCCA)n	Simple_repeat	1	62	(0)	3705846
20	25.0	1.6	1.6	chr7	100088957	100089019	(59256954)	+	(GGC)n	Simple_repeat	1	64	(0)	3705847
15	9.1	0.0	0.0	chr7	100272316	100272339	(59073634)	+	(TGC)n	Simple_repeat	1	24	(0)	3706206
45	10.8	0.0	0.0	chr7	100889719	100889788	(58456185)	+	(CCTCC)n	Simple_repeat	1	70	(0)	3707582
16	17.9	5.8	1.8	chr7	101165508	101165559	(58180414)	+	(GGCTC)n	Simple_repeat	1	55	(0)	3708140
27	0.0	0.0	0.0	chr7	101165787	101165812	(58180161)	+	(AATG)n	Simple_repeat	1	26	(0)	3708141
11	21.1	8.2	0.0	chr7	101217193	101217241	(58128732)	+	(GCAGGCC)n	Simple_repeat	1	53	(0)	3708256
18	4.2	0.0	0.0	chr7	101217220	101217244	(58128729)	+	(GCA)n	Simple_repeat	1	25	(0)	3708257
17	10.4	4.4	4.3	chr7	101232275	101232319	(58113654)	+	G-rich	Low_complexity	1	47	(0)	3708287
197	32.0	7.2	2.8	chr7	101244545	101244650	(58101323)	+	MIRb	SINE/MIR	155	265	(3)	3708308
1765	15.6	0.0	1.8	chr7	101321942	101322217	(58023756)	C	AluJo	SINE/Alu	(21)	291	21	3708505
12	8.4	0.0	6.9	chr7	102363835	102363863	(56982110)	+	(TGCG)n	Simple_repeat	1	29	(0)	3710829
11	21.0	2.5	2.4	chr7	102447053	102447092	(56898881)	+	G-rich	Low_complexity	1	41	(0)	3711033
974	17.6	11.2	0.0	chr7	104664525	104664723	(54681250)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	3714440
22	11.3	0.0	0.0	chr7	105521796	105521833	(53824140)	+	(CGGGGAG)n	Simple_repeat	1	38	(0)	3716040
18	16.4	0.0	2.7	chr7	105521971	105522021	(53823952)	+	G-rich	Low_complexity	1	49	(0)	3716041
553	15.7	4.2	0.0	chr7	106598920	106599041	(52746932)	C	MLT1J	LTR/ERVL-MaLR	(407)	155	20	3717814
1025	29.5	8.2	7.0	chr7	106744584	106745187	(52600786)	+	LTR67B	LTR/ERVL	9	620	(0)	3717997
1600	23.7	4.4	8.0	chr7	106944168	106944692	(52401281)	+	LTR33A	LTR/ERVL	7	497	(23)	3718308
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
512	26.7	6.5	5.0	chr7	110804519	110804841	(48541132)	+	MLT1J	LTR/ERVL-MaLR	1	367	(145)	3723485
12	29.0	2.0	0.0	chr7	111562247	111562296	(47783677)	+	(CACGCG)n	Simple_repeat	1	51	(0)	3724507
12	24.4	2.6	0.0	chr7	112450737	112450775	(46895198)	+	(GGC)n	Simple_repeat	1	40	(0)	3725834
22	3.9	0.0	0.0	chr7	120950749	120950775	(38395198)	+	(T)n	Simple_repeat	1	27	(0)	3737033
29	16.1	0.0	0.0	chr7	121873273	121873328	(37472645)	+	(CTCTCT)n	Simple_repeat	1	56	(0)	3738330
30	3.4	0.0	0.0	chr7	121873329	121873358	(37472615)	+	(CA)n	Simple_repeat	1	30	(0)	3738331
13	21.5	7.3	2.7	chr7	121873738	121873805	(37472168)	+	(CGCGCCC)n	Simple_repeat	1	73	(0)	3738332
15923	10.3	1.5	0.1	chr7	125940888	125943076	(33402897)	C	HERVL-int	LTR/ERVL	(2966)	2688	468	3743795
18	23.0	8.5	3.1	chr7	127392851	127392968	(31953005)	+	(GCCGAGG)n	Simple_repeat	1	128	(0)	3745668
16	21.1	4.1	0.0	chr7	128830589	128830637	(30515336)	+	(AGCCCC)n	Simple_repeat	1	51	(0)	3748034
19	19.3	0.0	0.0	chr7	128862618	128862659	(30483314)	+	(TGAA)n	Simple_repeat	1	42	(0)	3748067
3971	6.5	1.1	0.0	chr7	129170316	129170834	(30175139)	C	MER41A	LTR/ERV1	(29)	525	1	3748639
31	29.5	2.4	1.5	chr7	129224897	129225023	(30120950)	+	G-rich	Low_complexity	1	130	(0)	3748759
2080	15.0	0.3	0.7	chr7	129649760	129650052	(29695921)	C	AluJo	SINE/Alu	(20)	292	1	3749604
1271	14.6	14.1	0.0	chr7	130317201	130317410	(29028563)	+	Tigger3c	DNA/TcMar-Tigger	356	602	(0)	3750948
1806	16.3	0.0	1.4	chr7	130317475	130317762	(29028211)	C	AluJb	SINE/Alu	(24)	288	5	3750949
222	28.8	17.3	8.9	chr7	130440318	130440411	(28905562)	+	L2c	LINE/L2	3287	3378	(9)	3751160
240	22.6	6.1	0.0	chr7	130440616	130440677	(28905296)	+	L2c	LINE/L2	3253	3318	(69)	3751166
18	23.7	0.0	6.8	chr7	130440761	130440833	(28905140)	+	(GCCCC)n	Simple_repeat	1	73	(0)	3751167
1057	25.8	3.6	4.2	chr7	131072672	131072979	(28272994)	+	LTR33C	LTR/ERVL	10	315	(314)	3752083
186	26.7	2.2	2.2	chr7	133082431	133082476	(26263497)	C	L2c	LINE/L2	(70)	3317	3272	3755351
13	25.5	0.0	9.5	chr7	134127159	134127242	(25218731)	+	A-rich	Low_complexity	1	84	(0)	3757000
476	26.4	1.9	0.0	chr7	136369421	136369526	(22976447)	+	MLT1J1	LTR/ERVL-MaLR	65	172	(272)	3760526
340	14.0	5.6	9.1	chr7	136369549	136369640	(22976333)	+	MLT1J1	LTR/ERVL-MaLR	352	446	(2)	3760526
14	16.1	0.0	0.0	chr7	138460459	138460486	(20885487)	+	GA-rich	Low_complexity	1	28	(0)	3763675
12	19.6	7.0	5.3	chr7	138460756	138460826	(20885147)	+	(CTGC)n	Simple_repeat	1	76	(0)	3763676
18	25.3	4.2	1.3	chr7	139035791	139035862	(20310111)	+	(CCGCCT)n	Simple_repeat	1	75	(0)	3764776
12	18.7	4.3	4.2	chr7	139036021	139036066	(20309907)	+	(CGCGG)n	Simple_repeat	1	48	(0)	3764777
14	17.3	5.1	0.0	chr7	139036105	139036143	(20309830)	+	(GCCTGG)n	Simple_repeat	1	41	(0)	3764778
948	27.4	6.0	5.6	chr7	139088241	139088655	(20257318)	+	MLT1J	LTR/ERVL-MaLR	2	344	(100)	3764892
697	12.8	0.0	0.0	chr7	139515125	139515226	(19830747)	C	AluSz6	SINE/Alu	(11)	301	200	3765768
882	28.5	6.3	4.9	chr7	139515245	139515669	(19830304)	C	LTR89	LTR/ERVL?	(2)	877	447	3765769
461	18.0	1.1	0.0	chr7	139542500	139542588	(19803385)	C	MLT1J	LTR/ERVL-MaLR	(343)	169	80	3765823
269	22.7	1.3	0.0	chr7	141512652	141512726	(17833247)	C	Tigger15a	DNA/TcMar-Tigger	(136)	579	504	3769407
2614	10.8	1.1	0.5	chr7	141564242	141564612	(17781361)	C	THE1C	LTR/ERVL-MaLR	(0)	375	3	3769492
1018	31.1	10.4	5.1	chr7	141564621	141564716	(17781257)	+	L2c	LINE/L2	2068	2183	(1236)	3769486
17	21.6	5.6	0.0	chr7	143381260	143381313	(15964660)	+	(CTCC)n	Simple_repeat	1	57	(0)	3771838
33	11.4	1.3	6.5	chr7	146116098	146116173	(13229800)	+	GA-rich	Low_complexity	1	77	(0)	3775457
617	26.6	2.8	2.3	chr7	147833720	147833896	(11512077)	C	LTR33B	LTR/ERVL	(324)	179	2	3777815
1926	25.2	3.9	1.8	chr7	148297418	148297967	(11048006)	C	MER90	LTR/ERV1	(13)	562	1	3778553
765	0.0	0.0	0.0	chr7	148941488	148941571	(10404402)	+	HY5	scRNA	1	84	(0)	3779656
792	4.3	0.0	0.0	chr7	148963315	148963407	(10382566)	+	HY4	scRNA	1	93	(0)	3779711
2065	12.1	2.4	0.0	chr7	148975628	148975908	(10370065)	C	AluSx	SINE/Alu	(24)	288	1	3779746
433	22.0	2.7	1.8	chr7	148975982	148976092	(10369881)	+	LTR67B	LTR/ERVL	48	159	(461)	3779747
414	22.9	3.7	8.4	chr7	148976338	148976480	(10369493)	C	Charlie4z	DNA/hAT-Charlie	(24)	143	8	3779748
930	0.0	0.0	0.0	chr7	148983755	148983855	(10362118)	+	HY3	scRNA	1	101	(0)	3779765
15	0.0	0.0	0.0	chr7	149239672	149239690	(10106283)	+	(CGG)n	Simple_repeat	1	19	(0)	3780360
622	4.2	0.0	0.0	chr7	149310190	149310261	(10035712)	+	tRNA-Cys-TGY	tRNA	1	72	(3)	3780498
2085	14.4	12.6	0.8	chr7	149310597	149310973	(10035000)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3780499
16	13.4	0.0	2.9	chr7	149714673	149714707	(9631266)	+	G-rich	Low_complexity	1	35	(0)	3781084
4381	10.9	3.0	0.7	chr7	150322212	150322830	(9023143)	+	MER41B	LTR/ERV1	1	634	(0)	3781881
13	28.0	0.0	4.9	chr7	150323401	150323461	(9022512)	+	G-rich	Low_complexity	1	61	(0)	3781882
13	8.7	4.0	0.0	chr7	150992687	150992711	(8353262)	+	(TGTC)n	Simple_repeat	1	26	(0)	3782757
14	22.9	9.0	1.2	chr7	151018766	151018843	(8327130)	+	(GCGCAG)n	Simple_repeat	1	85	(0)	3782791
11	25.3	0.0	4.3	chr7	151410196	151410213	(7935760)	+	(CTCCGC)n	Simple_repeat	1	45	(0)	3783390
13	16.6	0.0	0.0	chr7	151410214	151410240	(7935733)	+	(GCC)n	Simple_repeat	1	27	(0)	3783391
12	12.6	8.6	0.0	chr7	151520269	151520303	(7825670)	+	(GGCGCGT)n	Simple_repeat	1	38	(0)	3783579
427	22.2	17.1	12.5	chr7	152386117	152386332	(6959641)	+	MIR	SINE/MIR	19	246	(16)	3784996
256	26.0	2.9	12.3	chr7	152386284	152386397	(6959576)	C	MIR1_Amn	SINE/MIR	(68)	200	97	3784997
735	19.0	11.1	4.0	chr7	152386438	152386662	(6959311)	+	MLT1J1	LTR/ERVL-MaLR	2	244	(200)	3784998
349	26.2	19.0	0.0	chr7	152386749	152386893	(6959080)	C	MIRb	SINE/MIR	(64)	204	26	3784999
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
714	21.7	0.7	1.9	chr7	153061796	153061950	(6284023)	C	MER3	DNA/hAT-Charlie	(56)	153	1	3786455
362	22.4	2.3	0.0	chr7	153061951	153062035	(6283938)	C	ERVL-E-int	LTR/ERVL	(2865)	2802	2716	3786454
594	29.6	10.7	3.2	chr7	153062037	153062384	(6283589)	+	LTR16E1	LTR/ERVL	2	380	(158)	3786456
700	33.0	8.5	1.9	chr7	153190600	153190973	(6155000)	+	MLT1J2	LTR/ERVL-MaLR	44	444	(0)	3786626
14	27.5	2.9	2.8	chr7	155003419	155003487	(4342486)	+	G-rich	Low_complexity	1	71	(0)	3789016
15	24.6	2.0	2.0	chr7	155644567	155644616	(3701357)	+	(CGG)n	Simple_repeat	1	51	(0)	3789931
16	27.8	1.8	0.0	chr7	156640631	156640686	(2705287)	+	G-rich	Low_complexity	1	57	(0)	3791165
402	7.2	10.2	2.5	chr7	157298928	157299839	(2046134)	+	(TG)n	Simple_repeat	1	981	(0)	3792224
718	24.4	3.8	0.9	chr7	158830063	158830293	(515680)	C	MER65A	LTR/ERV1	(207)	238	1	3793758
18	4.0	0.0	3.6	chr8	544659	544686	(144593950)	+	(GGC)n	Simple_repeat	1	28	(0)	3794932
14	11.5	0.0	3.3	chr8	544866	544895	(144593741)	+	(GGGCG)n	Simple_repeat	1	30	(0)	3794933
15	12.9	6.8	2.1	chr8	1764332	1764375	(143374261)	+	(GCGGAG)n	Simple_repeat	1	47	(0)	3796066
21	22.2	0.0	6.5	chr8	6708508	6708584	(138430052)	+	G-rich	Low_complexity	1	77	(0)	3802488
12	18.1	0.0	3.0	chr8	6835514	6835546	(138303090)	+	(CCTGCC)n	Simple_repeat	1	33	(0)	3802658
394	17.1	4.7	2.9	chr8	7084068	7084220	(138054416)	C	MLT1J1	LTR/ERVL-MaLR	(204)	207	41	3802966
239	26.8	3.9	1.6	chr8	7084263	7084387	(138054249)	C	L1MD	LINE/L1	(3595)	2551	2424	3802967
470	18.8	10.5	6.4	chr8	9922111	9922260	(135216376)	+	MLT1J	LTR/ERVL-MaLR	42	174	(338)	3807274
1270	24.2	12.1	1.0	chr8	9922455	9922843	(135215793)	+	LTR16	LTR/ERVL	1	438	(0)	3807275
21	0.0	0.0	0.0	chr8	10335251	10335273	(134803363)	+	(T)n	Simple_repeat	1	23	(0)	3807903
328	35.2	9.8	3.5	chr8	10554935	10555121	(134583515)	C	L2a	LINE/L2	(1)	3425	3239	3808258
5752	8.8	8.2	0.1	chr8	10555122	10555948	(134582688)	+	MER4D1	LTR/ERV1	1	900	(0)	3808259
1467	20.2	3.9	1.0	chr8	10990581	10990882	(134147754)	C	AluJb	SINE/Alu	(1)	311	1	3808891
227	32.9	0.0	0.0	chr8	11467189	11467258	(133671378)	C	MIRb	SINE/MIR	(82)	186	117	3809627
403	27.5	3.0	1.5	chr8	11885719	11885851	(133252785)	+	LTR84b	LTR/ERVL	589	723	(34)	3810334
221	30.1	6.7	0.0	chr8	11886133	11886215	(133252421)	+	MER91C	DNA/hAT-Tip100	1	89	(51)	3810335
253	23.7	4.9	1.0	chr8	12024138	12024235	(133114401)	+	L1MD	LINE/L1	2424	2525	(3621)	3810560
431	20.6	14.1	3.5	chr8	12024272	12024457	(133114179)	+	MLT1J2	LTR/ERVL-MaLR	1	207	(204)	3810561
238	29.2	17.4	6.0	chr8	12024473	12024654	(133113982)	+	MLT1J2	LTR/ERVL-MaLR	240	446	(2)	3810561
298	28.6	4.0	0.8	chr8	12674944	12675063	(132463573)	+	L1M5	LINE/L1	2424	2547	(3599)	3811410
454	19.5	14.1	3.5	chr8	12675078	12675263	(132463373)	+	MLT1J2	LTR/ERVL-MaLR	1	207	(204)	3811411
228	28.0	18.8	7.7	chr8	12675279	12675460	(132463176)	+	MLT1J2	LTR/ERVL-MaLR	240	446	(2)	3811411
20	19.1	3.1	4.5	chr8	17157071	17157135	(127981501)	+	(CGC)n	Simple_repeat	1	67	(0)	3817789
27	6.1	0.0	0.0	chr8	17246733	17246767	(127891869)	+	(GGCGGT)n	Simple_repeat	1	35	(0)	3817919
909	23.2	29.8	1.2	chr8	17898463	17898962	(127239674)	+	MLT2F	LTR/ERVL	1	658	(5)	3818914
3324	16.7	5.3	0.7	chr8	18391393	18392071	(126746565)	+	MER4D	LTR/ERV1	1	712	(191)	3819569
782	27.6	6.1	14.9	chr8	20523634	20524196	(124614440)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	3	3823007
12	19.9	0.0	0.0	chr8	20524199	20524227	(124614409)	+	(TTG)n	Simple_repeat	1	29	(0)	3823008
816	26.2	9.3	6.3	chr8	21307529	21307956	(123830680)	+	MLT1J1	LTR/ERVL-MaLR	3	444	(0)	3824225
1268	27.8	6.9	4.3	chr8	21918160	21918599	(123220037)	C	LTR67B	LTR/ERVL	(166)	454	3	3825285
331	35.6	1.7	0.0	chr8	23287816	23287930	(121850706)	+	MIRb	SINE/MIR	23	139	(129)	3827672
14	27.9	2.9	2.9	chr8	23529451	23529518	(121609118)	+	(CGG)n	Simple_repeat	1	70	(0)	3828099
13	31.3	1.2	4.8	chr8	24913303	24913384	(120225252)	+	A-rich	Low_complexity	1	83	(0)	3830164
1059	27.5	4.4	0.3	chr8	25098261	25098545	(120040091)	C	MLT1J2	LTR/ERVL-MaLR	(146)	302	6	3830493
252	37.0	4.7	3.2	chr8	25098570	25098756	(120039880)	C	L2c	LINE/L2	(175)	3212	3023	3830494
515	21.1	5.6	1.3	chr8	27126820	27126973	(118011663)	C	L1MC3	LINE/L1	(15)	7770	7610	3833842
323	22.8	0.0	2.1	chr8	27126974	27127067	(118011569)	C	Charlie7	DNA/hAT-Charlie	(2483)	129	38	3833839
615	31.1	7.9	6.0	chr8	27127073	27127668	(118010968)	C	L1M6	LINE/L1	(5887)	609	2	3833843
65	0.0	0.0	0.0	chr8	27490700	27490754	(117647882)	+	(AC)n	Simple_repeat	1	55	(0)	3834470
15	20.6	6.0	0.0	chr8	27490972	27491021	(117647615)	+	(CCTCTC)n	Simple_repeat	1	53	(0)	3834471
14	25.2	0.0	3.9	chr8	27491089	27491139	(117647497)	+	(GGCAG)n	Simple_repeat	1	51	(0)	3834472
322	2.9	0.0	0.0	chr8	27774167	27774228	(117364408)	C	AluSc	SINE/Alu	(0)	309	247	3834964
13	22.4	0.0	4.4	chr8	28622291	28622335	(116516301)	+	(CCGGCGC)n	Simple_repeat	1	45	(0)	3836530
16	16.4	0.0	0.0	chr8	28701422	28701455	(116437181)	+	(CGCGCC)n	Simple_repeat	1	34	(0)	3836721
443	30.3	8.0	1.9	chr8	29180942	29181153	(115957483)	+	MLT1J	LTR/ERVL-MaLR	1	226	(286)	3837472
447	20.5	0.0	3.5	chr8	29181229	29181314	(115957322)	+	MLT1J	LTR/ERVL-MaLR	346	428	(84)	3837472
24	19.2	0.0	0.0	chr8	29263113	29263165	(115875471)	+	G-rich	Low_complexity	1	53	(0)	3837623
7820	8.4	7.5	8.9	chr8	30087970	30089243	(115049393)	+	LTR12D	LTR/ERV1	1	1254	(0)	3839013
715	22.7	5.3	2.0	chr8	30164874	30165075	(114973561)	C	MLT1J	LTR/ERVL-MaLR	(295)	217	9	3839182
26	14.5	0.0	0.0	chr8	30658138	30658183	(114480453)	+	(GGC)n	Simple_repeat	1	46	(0)	3840124
19	19.1	1.3	7.8	chr8	31033715	31033790	(114104846)	+	(GGCGG)n	Simple_repeat	1	77	(0)	3840915
624	32.1	6.7	6.2	chr8	32927780	32928214	(112210422)	+	LTR33	LTR/ERVL	23	466	(49)	3843702
1192	26.8	4.0	4.2	chr8	37657719	37658137	(107480499)	C	MLT1J	LTR/ERVL-MaLR	(43)	469	76	3850721
2085	21.2	3.5	2.0	chr8	37658154	37658605	(107480031)	C	MLT1C	LTR/ERVL-MaLR	(3)	464	6	3850722
13	12.7	0.0	0.0	chr8	38231750	38231775	(106906861)	+	(CCGCC)n	Simple_repeat	1	26	(0)	3851937
27	22.6	4.8	2.8	chr8	38382201	38382303	(106756333)	+	(GCC)n	Simple_repeat	1	108	(0)	3852196
2037	9.9	1.4	0.0	chr8	38457705	38457987	(106680649)	+	AluSz6	SINE/Alu	1	287	(25)	3852319
14	31.0	1.2	4.6	chr8	38468505	38468590	(106670046)	+	(GCCGCCC)n	Simple_repeat	1	87	(0)	3852337
12	17.4	2.9	2.8	chr8	41577974	41578008	(103560628)	+	(GCCCC)n	Simple_repeat	1	36	(0)	3857273
12	17.1	4.9	2.3	chr8	41895979	41896019	(103242617)	+	(CGCAGCC)n	Simple_repeat	1	43	(0)	3857794
18	16.4	5.2	3.3	chr8	43056172	43056229	(102082407)	+	(CGCAGCC)n	Simple_repeat	1	61	(0)	3860029
13	18.5	7.0	0.0	chr8	43056407	43056449	(102082187)	+	(CAGCCC)n	Simple_repeat	1	46	(0)	3860030
238	28.1	4.0	8.3	chr8	43086035	43086166	(102052470)	C	LTR67B	LTR/ERVL	(126)	494	369	3860086
445	22.7	1.4	7.8	chr8	43086227	43086379	(102052257)	C	LTR67B	LTR/ERVL	(445)	175	33	3860086
2051	13.8	0.0	0.0	chr8	43086440	43086730	(102051906)	C	AluSx1	SINE/Alu	(21)	291	1	3860087
11	29.7	1.8	1.8	chr8	47960107	47960161	(97178475)	+	(CCCGCT)n	Simple_repeat	1	56	(0)	3862668
2434	7.0	0.3	0.0	chr8	48007924	48008221	(97130415)	C	AluSx	SINE/Alu	(13)	299	1	3862761
14	8.9	11.1	0.0	chr8	48008411	48008446	(97130190)	+	(GTGC)n	Simple_repeat	1	40	(0)	3862762
213	37.8	2.5	0.8	chr8	48545048	48545167	(96593469)	+	MIR3	SINE/MIR	43	164	(44)	3863441
369	31.2	1.8	0.0	chr8	51370073	51370184	(93768452)	+	MIRb	SINE/MIR	86	199	(69)	3866704
15	22.0	1.7	5.1	chr8	55102738	55102795	(90035841)	+	(GCTGG)n	Simple_repeat	1	59	(0)	3871976
13	24.4	2.2	2.1	chr8	55103145	55103190	(90035446)	+	(CAG)n	Simple_repeat	1	47	(0)	3871977
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
13	29.6	1.5	3.0	chr8	63038959	63039023	(82099613)	+	(GCCCGC)n	Simple_repeat	1	66	(0)	3882621
3308	19.8	6.8	4.4	chr8	63300303	63301051	(81837585)	C	LTR41	LTR/ERVL	(0)	768	1	3883063
875	29.6	11.2	3.5	chr8	65209939	65210309	(79928327)	+	MLT1J1	LTR/ERVL-MaLR	40	442	(2)	3885459
14	24.0	5.8	2.7	chr8	66613395	66613463	(78525173)	+	G-rich	Low_complexity	1	73	(0)	3887701
2239	17.8	4.8	2.1	chr8	66870061	66870543	(78268093)	C	L1MB7	LINE/L1	(145)	6039	5543	3888274
29	0.0	0.0	0.0	chr8	67343821	67343847	(77794789)	+	(GCG)n	Simple_repeat	1	27	(0)	3889097
17	24.9	1.2	6.2	chr8	67343866	67343945	(77794691)	+	(CGCGG)n	Simple_repeat	1	81	(0)	3889098
775	23.5	6.0	0.0	chr8	69720803	69720989	(75417647)	C	MER58A	DNA/hAT-Charlie	(0)	224	26	3892461
619	22.0	20.7	1.5	chr8	69721012	69721354	(75417282)	+	MLT1J	LTR/ERVL-MaLR	75	487	(25)	3892462
26	0.0	0.0	0.0	chr8	69832995	69833019	(75305617)	+	(CCG)n	Simple_repeat	1	25	(0)	3892657
12	14.1	7.5	0.0	chr8	69834053	69834086	(75304550)	+	(GCGTGC)n	Simple_repeat	1	36	(0)	3892658
50	0.0	0.0	0.0	chr8	69834087	69834129	(75304507)	+	(CA)n	Simple_repeat	1	43	(0)	3892659
38	0.0	0.0	0.0	chr8	70669607	70669639	(74468997)	+	(TG)n	Simple_repeat	1	33	(0)	3894218
993	28.7	6.7	7.5	chr8	71730302	71730756	(73407880)	C	LTR33B	LTR/ERVL	(4)	499	49	3895601
464	28.6	2.2	6.7	chr8	72179569	72179808	(72958828)	+	HERVL-int	LTR/ERVL	5426	5654	(13)	3896137
411	23.0	8.8	6.9	chr8	72179827	72179971	(72958665)	+	LTR50	LTR/ERVL	20	167	(628)	3896137
406	19.9	8.7	5.3	chr8	72316564	72316720	(72821916)	+	LTR50	LTR/ERVL	1	160	(635)	3896292
423	25.7	12.2	5.1	chr8	72940745	72940941	(72197695)	C	Charlie16a	DNA/hAT-Charlie	(1)	341	129	3897115
28	0.0	0.0	0.0	chr8	73009049	73009074	(72129562)	+	(GAG)n	Simple_repeat	1	26	(0)	3897250
299	30.6	14.4	1.9	chr8	73009320	73009499	(72129137)	+	MIRb	SINE/MIR	15	228	(40)	3897251
27	29.3	0.0	5.7	chr8	74321412	74321535	(70817101)	+	(CGC)n	Simple_repeat	1	124	(0)	3899515
19	20.6	0.0	0.0	chr8	76680927	76680965	(68457671)	+	(TG)n	Simple_repeat	1	39	(0)	3902545
24	14.4	4.3	0.0	chr8	76681172	76681218	(68457418)	+	(CT)n	Simple_repeat	1	49	(0)	3902546
17	12.7	0.0	0.0	chr8	76681492	76681517	(68457119)	+	(T)n	Simple_repeat	1	26	(0)	3902547
17	18.6	0.0	0.0	chr8	80171178	80171215	(64967421)	+	(CTCACA)n	Simple_repeat	1	38	(0)	3907147
27	15.9	1.7	1.7	chr8	80171332	80171405	(64967231)	+	(AGCCCA)n	Simple_repeat	1	74	(0)	3907148
21	14.4	1.6	6.5	chr8	80486106	80486166	(64652470)	+	(CCCCA)n	Simple_repeat	1	62	(0)	3907902
2415	9.3	0.3	0.3	chr8	81721523	81721834	(63416802)	+	AluSp	SINE/Alu	2	313	(0)	3909683
18	21.2	0.0	0.0	chr8	90082709	90082746	(55055890)	+	(GT)n	Simple_repeat	1	38	(0)	3920710
4199	10.0	0.5	1.0	chr8	90580249	90580846	(54557790)	+	MER41E	LTR/ERV1	1	595	(0)	3921389
2044	20.8	3.8	4.1	chr8	90580847	90581324	(54557312)	C	MLT1D	LTR/ERVL-MaLR	(24)	481	1	3921388
335	13.4	0.0	11.8	chr8	93754619	93754694	(51383942)	+	Tigger5b	DNA/TcMar-Tigger	401	467	(5)	3925741
195	23.3	0.0	0.0	chr8	95025543	95025585	(50113051)	C	MIRb	SINE/MIR	(20)	248	206	3928050
1408	21.3	8.1	0.9	chr8	95894655	95895093	(49243543)	C	MLT2F	LTR/ERVL	(141)	522	1	3929440
630	29.9	3.7	4.9	chr8	96134537	96134881	(49003755)	+	MLT1J	LTR/ERVL-MaLR	9	410	(200)	3929791
282	33.0	1.8	5.9	chr8	96235753	96235871	(48902765)	+	MIRb	SINE/MIR	13	126	(142)	3929960
1937	27.1	4.9	8.3	chr8	96375162	96375838	(48762798)	+	MER20B	DNA/hAT-Charlie	1	653	(130)	3930173
879	23.0	1.0	2.4	chr8	96375839	96376047	(48762589)	+	MLT1J2	LTR/ERVL-MaLR	1	206	(242)	3930174
245	27.1	0.0	3.4	chr8	96376088	96376175	(48762461)	+	MLT1J2	LTR/ERVL-MaLR	364	448	(0)	3930174
425	24.1	7.8	0.8	chr8	96419540	96419668	(48718968)	+	MER5B	DNA/hAT-Charlie	39	169	(9)	3930264
500	28.0	6.9	7.1	chr8	96419686	96420092	(48718544)	C	LTR78B	LTR/ERV1	(282)	1014	609	3930261
773	23.4	38.6	1.0	chr8	97421476	97421783	(47716853)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	87	3931688
344	19.4	0.0	0.0	chr8	97421808	97421869	(47716767)	+	LTR102_Mam	LTR/ERVL	790	851	(0)	3931689
15	24.2	3.6	1.8	chr8	97775888	97775942	(47362694)	+	(GGC)n	Simple_repeat	1	57	(0)	3932412
14	28.8	4.1	1.3	chr8	97776270	97776342	(47362294)	+	G-rich	Low_complexity	1	76	(0)	3932413
14	19.2	9.3	0.0	chr8	98045591	98045644	(47092992)	+	(GCGGAA)n	Simple_repeat	1	59	(0)	3932978
1707	13.3	1.3	7.8	chr8	98045693	98046014	(47092622)	+	AluJb	SINE/Alu	1	301	(11)	3932979
646	32.8	3.2	4.7	chr8	98364724	98365104	(46773532)	+	LTR33	LTR/ERVL	74	448	(67)	3933568
17	8.1	0.0	0.0	chr8	98941694	98941719	(46196917)	+	(CCT)n	Simple_repeat	1	26	(0)	3934482
14	29.1	0.0	3.5	chr8	100310098	100310155	(44828481)	+	(CCT)n	Simple_repeat	1	58	(0)	3936538
804	22.9	22.7	4.1	chr8	100381484	100381836	(44756800)	+	MLT1J1	LTR/ERVL-MaLR	1	419	(29)	3936679
2498	9.6	0.0	0.0	chr8	100815901	100816212	(44322424)	C	AluSx1	SINE/Alu	(0)	312	1	3937570
393	7.4	3.6	0.0	chr8	100816330	100816383	(44322253)	C	MLT1J	LTR/ERVL-MaLR	(357)	155	100	3937571
241	8.3	2.7	0.0	chr8	100816352	100816387	(44322249)	C	LTR67B	LTR/ERVL	(503)	117	81	3937572
259	19.4	6.5	0.0	chr8	101153707	101153778	(43984858)	C	Charlie7a	DNA/hAT-Charlie	(48)	224	148	3938257
1260	22.6	5.1	2.1	chr8	101153782	101154120	(43984516)	+	MLT1J	LTR/ERVL-MaLR	2	351	(161)	3938258
22	27.2	1.0	5.7	chr8	101205283	101205386	(43933250)	+	(CCCGCCC)n	Simple_repeat	1	105	(0)	3938341
18	15.3	3.6	5.2	chr8	101493394	101493449	(43645187)	+	(CCCT)n	Simple_repeat	1	58	(0)	3938863
464	27.2	19.8	0.0	chr8	101877645	101877806	(43260830)	+	MIR	SINE/MIR	23	224	(38)	3939466
895	16.1	6.7	0.0	chr8	102751129	102751296	(42387340)	+	MLT1J	LTR/ERVL-MaLR	2	181	(331)	3941037
2037	11.8	0.3	4.4	chr8	102751384	102751704	(42386932)	+	AluSx1	SINE/Alu	1	308	(4)	3941038
345	32.1	7.1	4.1	chr8	102807682	102807942	(42330694)	C	L2b	LINE/L2	(179)	3208	2927	3941147
27	13.7	3.5	1.7	chr8	102863614	102863671	(42274965)	+	(CCG)n	Simple_repeat	1	60	(0)	3941253
1054	23.3	13.8	3.6	chr8	102906177	102906533	(42232103)	C	MLT1J	LTR/ERVL-MaLR	(50)	462	64	3941343
292	25.0	5.9	4.8	chr8	102906578	102906661	(42231975)	C	MIR	SINE/MIR	(177)	85	1	3941341
12	16.8	8.8	3.2	chr8	103299019	103299075	(41839561)	+	G-rich	Low_complexity	1	62	(0)	3942080
13	21.9	2.3	2.2	chr8	103500684	103500727	(41637909)	+	(CTCCCC)n	Simple_repeat	1	45	(0)	3942426
13	19.6	2.9	0.0	chr8	103500804	103500838	(41637798)	+	(GCC)n	Simple_repeat	1	36	(0)	3942427
442	14.3	6.5	2.4	chr8	105707976	105708065	(39430571)	C	MLT1J2	LTR/ERVL-MaLR	(342)	170	64	3945519
618	26.3	21.9	1.4	chr8	108774179	108774443	(36364193)	+	MLT1J1	LTR/ERVL-MaLR	1	322	(122)	3949870
18	3.7	3.6	0.0	chr8	108787618	108787645	(36350991)	+	(GGCGG)n	Simple_repeat	1	29	(0)	3949880
561	25.3	3.2	6.7	chr8	108787879	108788073	(36350563)	C	MIRb	SINE/MIR	(46)	222	35	3949881
604	28.1	7.1	3.5	chr8	108864547	108865006	(36273630)	C	LTR33C	LTR/ERVL	(3)	626	1	3949991
836	25.3	2.1	6.3	chr8	116602394	116602646	(28535990)	+	LTR88b	LTR/Gypsy?	7	248	(589)	3960304
19	3.0	5.3	5.0	chr8	116938473	116938510	(28200126)	+	(GGC)n	Simple_repeat	1	40	(0)	3960865
2452	12.1	0.0	2.3	chr8	118009540	118009885	(27128751)	+	MER1B	DNA/hAT-Charlie	1	338	(1)	3962538
267	22.9	8.5	9.9	chr8	118071896	118072026	(27066610)	C	MIRb	SINE/MIR	(117)	151	20	3962655
532	27.7	4.0	1.2	chr8	118072086	118072253	(27066383)	+	MIR	SINE/MIR	88	260	(2)	3962656
439	27.6	11.4	6.8	chr8	118505348	118505759	(26632877)	+	MLT1J	LTR/ERVL-MaLR	36	504	(8)	3963428
19	11.6	0.0	0.0	chr8	118622163	118622190	(26516446)	+	(G)n	Simple_repeat	1	28	(0)	3963593
528	14.3	1.1	0.2	chr8	118764143	118764265	(26374371)	+	MER57B2	LTR/ERV1	276	407	(28)	3963818
3660	16.7	3.1	2.6	chr8	118764270	118764969	(26373667)	+	MER57A-int	LTR/ERV1	1	704	(5483)	3963818
14	20.6	0.0	0.0	chr8	122781768	122781801	(22356835)	+	(TCTG)n	Simple_repeat	1	34	(0)	3970516
19	0.0	0.0	3.7	chr8	122782239	122782265	(22356371)	+	(GAG)n	Simple_repeat	1	27	(0)	3970517
13	23.4	2.1	2.1	chr8	122782757	122782803	(22355833)	+	(CCCGCTG)n	Simple_repeat	1	48	(0)	3970518
29	0.0	0.0	0.0	chr8	122916477	122916503	(22222133)	+	(TTTCTT)n	Simple_repeat	1	27	(0)	3970790
481	25.5	11.8	2.9	chr8	123447604	123447773	(21690863)	C	L1ME3A	LINE/L1	(102)	6071	5885	3971902
16	16.8	0.0	0.0	chr8	123447776	123447802	(21690834)	+	A-rich	Low_complexity	1	27	(0)	3971903
228	23.6	3.5	0.0	chr8	123447806	123447860	(21690776)	C	MER58A	DNA/hAT-Charlie	(167)	57	1	3971897
753	30.4	8.1	1.7	chr8	123447905	123448266	(21690370)	+	MLT1J1	LTR/ERVL-MaLR	62	448	(0)	3971904
21	14.6	0.0	0.0	chr8	125430292	125430329	(19708307)	+	(AGG)n	Simple_repeat	1	38	(0)	3975580
1331	22.4	10.9	7.8	chr8	125700031	125700518	(19438118)	C	MLT1J	LTR/ERVL-MaLR	(7)	505	1	3976214
945	22.4	12.6	0.5	chr8	126510388	126510664	(18627972)	C	MLT1J1	LTR/ERVL-MaLR	(132)	312	1	3977635
287	24.0	1.9	3.7	chr8	126667691	126667798	(18470838)	+	LTR33	LTR/ERVL	37	142	(373)	3977977
270	26.0	0.0	1.3	chr8	126667800	126667877	(18470759)	+	LTR33	LTR/ERVL	335	411	(104)	3977977
12	20.1	6.5	4.5	chr8	127736250	127736311	(17402325)	+	(AGCG)n	Simple_repeat	1	66	(0)	3979958
1668	23.3	7.8	2.0	chr8	128788339	128788781	(16349855)	C	MLT2F	LTR/ERVL	(7)	656	186	3982015
546	19.6	0.3	0.2	chr8	128788799	128788911	(16349725)	C	MLT2F	LTR/ERVL	(513)	116	3	3982015
188	16.7	2.7	0.0	chr8	130421204	130421239	(14717397)	C	L3	LINE/CR1	(3)	4096	4060	3984996
297	24.7	0.0	1.3	chr8	130421302	130421379	(14717257)	C	L3	LINE/CR1	(353)	3746	3670	3984996
1073	27.0	6.5	4.1	chr8	130421380	130421816	(14716820)	+	MLT1J2	LTR/ERVL-MaLR	1	448	(0)	3984997
343	30.3	13.6	7.6	chr8	130421869	130422300	(14716336)	C	L2b	LINE/L2	(0)	3375	2914	3984998
412	22.9	2.5	4.1	chr8	132120460	132120582	(13018054)	+	MLT1J2	LTR/ERVL-MaLR	43	163	(285)	3987951
14	18.4	4.4	2.1	chr8	133297284	133297328	(11841308)	+	(GCGCCCC)n	Simple_repeat	1	47	(0)	3990150
693	28.3	9.0	7.4	chr8	133390924	133391423	(11747213)	+	MLT1J	LTR/ERVL-MaLR	1	509	(3)	3990357
1402	26.1	8.4	2.4	chr8	133434085	133434431	(11704205)	C	LTR33A_	LTR/ERVL	(109)	422	42	3990444
413	28.5	5.6	0.7	chr8	133434494	133434645	(11703991)	C	MIR	SINE/MIR	(12)	250	91	3990446
351	18.0	3.8	0.3	chr8	133485143	133485230	(11653406)	+	LTR33B	LTR/ERVL	34	128	(492)	3990545
226	26.1	11.5	0.0	chr8	133485454	133485522	(11653114)	+	LTR33B	LTR/ERVL	482	559	(61)	3990545
280	27.1	2.7	6.1	chr8	133485546	133485659	(11652977)	C	MIR3	SINE/MIR	(62)	146	37	3990546
198	34.0	4.9	0.0	chr8	134333942	134334038	(10804598)	C	MIRc	SINE/MIR	(61)	207	106	3992148
727	23.0	22.9	1.4	chr8	134334129	134334484	(10804152)	+	MLT1J1	LTR/ERVL-MaLR	8	444	(0)	3992149
1657	22.2	7.7	2.1	chr8	139675814	139676231	(5462405)	+	MLT1J2	LTR/ERVL-MaLR	1	443	(5)	4000725
1367	28.2	7.5	8.2	chr8	140969604	140969802	(4168834)	+	L2	LINE/L2	2163	2406	(1013)	4002903
749	30.0	10.5	11.1	chr8	140969803	140970308	(4168328)	+	LTR33B	LTR/ERVL	1	503	(0)	4002904
1367	28.2	7.5	8.2	chr8	140970309	140970818	(4167818)	+	L2	LINE/L2	2407	2867	(552)	4002903
438	20.7	3.3	0.1	chr8	141440045	141440180	(3698456)	C	MIR	SINE/MIR	(56)	152	15	4003639
425	17.5	1.2	0.0	chr8	141440520	141440599	(3698037)	C	MIR3	SINE/MIR	(50)	158	78	4003640
11	21.4	4.4	2.1	chr8	142129045	142129089	(3009547)	+	(GCCCAG)n	Simple_repeat	1	47	(0)	4004551
213	31.7	7.9	0.0	chr8	142383649	142383730	(2754906)	C	MIRb	SINE/MIR	(15)	253	165	4004833
15	31.1	0.0	1.6	chr8	142727285	142727345	(2411291)	+	(CGCCGC)n	Simple_repeat	1	61	(0)	4005232
217	31.8	3.7	4.4	chr8	143018269	143018403	(2120233)	+	MIR3	SINE/MIR	25	158	(50)	4005591
15	21.4	2.3	0.0	chr8	143018442	143018485	(2120151)	+	(CCCGCC)n	Simple_repeat	1	45	(0)	4005592
15	23.5	3.5	1.7	chr8	143276056	143276112	(1862524)	+	(GCCTGGC)n	Simple_repeat	1	59	(0)	4006002
16	16.1	2.8	1.4	chr8	143617538	143617580	(1521056)	+	G-rich	Low_complexity	1	43	(0)	4006383
14	31.9	3.9	0.0	chr8	143733516	143733592	(1405044)	+	(GCCCC)n	Simple_repeat	1	80	(0)	4006585
15	7.8	0.0	3.5	chr8	143733637	143733665	(1404971)	+	(CGCCC)n	Simple_repeat	1	29	(0)	4006586
26	19.3	1.9	7.6	chr8	143733908	143734010	(1404626)	+	(GCCCCG)n	Simple_repeat	1	105	(0)	4006587
14	4.7	0.0	4.2	chr8	143815611	143815634	(1323002)	+	(GCG)n	Simple_repeat	1	24	(0)	4006703
15	10.3	3.0	2.9	chr8	144103719	144103751	(1034885)	+	(GCC)n	Simple_repeat	1	34	(0)	4007110
17	27.7	2.4	7.1	chr8	144336660	144336783	(801853)	+	(GGCGCC)n	Simple_repeat	1	127	(0)	4007464
33	2.9	0.0	0.0	chr8	144336885	144336919	(801717)	+	(GGC)n	Simple_repeat	1	35	(0)	4007465
14	17.3	4.1	3.9	chr8	144337375	144337423	(801213)	+	G-rich	Low_complexity	1	51	(0)	4007467
11	23.9	7.4	0.0	chr8	144358704	144358757	(779879)	+	G-rich	Low_complexity	1	58	(0)	4007510
25	31.3	1.7	2.5	chr8	144478236	144478354	(660282)	+	GA-rich	Low_complexity	1	121	(0)	4007652
2395	8.8	1.3	0.3	chr8	144495428	144495735	(642901)	C	AluYm1	SINE/Alu	(0)	311	1	4007687
15	20.6	3.9	1.9	chr8	144518167	144518218	(620418)	+	G-rich	Low_complexity	1	54	(0)	4007701
202	31.7	11.3	3.8	chr8	144518624	144518754	(619882)	+	MIRb	SINE/MIR	13	154	(114)	4007702
12	15.1	0.0	9.1	chr8	144527045	144527088	(611548)	+	(CGCCCG)n	Simple_repeat	1	44	(0)	4007707
5432	19.0	9.1	0.8	chr8	144574851	144575978	(562658)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	1	4007763
271	34.2	5.1	0.0	chr8	144686091	144686239	(452397)	C	L1MEd	LINE/L1	(5739)	1347	1191	4007918
802	26.8	11.4	4.6	chr9	326604	326925	(138067792)	C	MLT1J1	LTR/ERVL-MaLR	(62)	382	63	4008988
762	25.5	16.8	1.5	chr9	1722353	1722694	(136672023)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	44	4011130
15	5.5	0.0	0.0	chr9	1909394	1909412	(136485305)	+	(T)n	Simple_repeat	1	19	(0)	4011396
686	29.2	1.0	1.0	chr9	1909429	1909625	(136485092)	C	MLT1J2	LTR/ERVL-MaLR	(248)	200	4	4011392
13	21.3	0.0	0.0	chr9	1909640	1909672	(136485045)	+	(TGTT)n	Simple_repeat	1	33	(0)	4011397
12	4.5	4.0	3.9	chr9	2621364	2621388	(135773329)	+	(CTG)n	Simple_repeat	1	26	(0)	4012375
457	18.9	20.8	2.8	chr9	4081366	4081681	(134313036)	+	MLT1J	LTR/ERVL-MaLR	62	448	(0)	4014502
499	18.8	13.2	5.3	chr9	14693759	14693910	(123700807)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	4029306
17	22.0	5.0	1.6	chr9	15510935	15510994	(122883723)	+	(CCG)n	Simple_repeat	1	63	(0)	4030658
221	29.1	9.1	2.6	chr9	19103188	19103300	(119291417)	+	MIRc	SINE/MIR	25	145	(123)	4035564
2274	8.0	0.0	6.6	chr9	19107687	19107987	(119286730)	C	AluSz	SINE/Alu	(11)	301	21	4035582
819	21.5	15.8	0.0	chr9	19107988	19108201	(119286516)	C	MIR	SINE/MIR	(6)	256	3	4035583
16	21.5	0.0	2.2	chr9	19789097	19789141	(118605576)	+	(CTGTGCG)n	Simple_repeat	1	45	(0)	4036889
13	29.4	1.3	5.3	chr9	21335468	21335551	(117059166)	+	G-rich	Low_complexity	1	80	(0)	4039097
61	0.0	0.0	0.0	chr9	21802986	21803037	(116591680)	+	(AC)n	Simple_repeat	1	52	(0)	4039728
16	4.5	0.0	0.0	chr9	23821697	23821719	(114572998)	+	(GGC)n	Simple_repeat	1	23	(0)	4042332
2359	15.5	2.3	0.3	chr9	33207453	33207840	(105186877)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4054954
270	28.4	1.9	7.3	chr9	33207841	33207881	(105186836)	C	MIRc	SINE/MIR	(184)	84	45	4054947
565	26.1	4.6	2.4	chr9	33207957	33208082	(105186635)	+	MLT1J2	LTR/ERVL-MaLR	63	190	(258)	4054955
2279	10.4	0.0	0.7	chr9	33208083	33208380	(105186337)	+	AluSx1	SINE/Alu	2	297	(15)	4054956
1355	15.7	0.5	2.2	chr9	34074015	34074243	(104320474)	+	AluJb	SINE/Alu	75	299	(13)	4056653
232	27.7	0.0	0.0	chr9	34074515	34074561	(104320156)	C	L2c	LINE/L2	(232)	3155	3109	4056654
247	22.4	0.0	5.6	chr9	34074598	34074658	(104320059)	C	L1ME3G	LINE/L1	(297)	627	569	4056655
15	17.7	0.0	7.7	chr9	34512783	34512834	(103881883)	+	(CCCTGT)n	Simple_repeat	1	52	(0)	4057558
14	6.0	11.4	0.0	chr9	34637661	34637695	(103757022)	+	(CGGCCCA)n	Simple_repeat	1	39	(0)	4057709
12	19.3	6.1	5.7	chr9	34637696	34637723	(103756994)	+	(GCACGGC)n	Simple_repeat	4	70	(0)	4057710
402	30.8	3.6	0.8	chr9	34646257	34646390	(103748327)	+	L2b	LINE/L2	3236	3373	(2)	4057738
184	28.9	8.8	6.6	chr9	34649449	34649570	(103745147)	C	MamRTE1	LINE/RTE-BovB	(138)	3674	3550	4057740
3330	14.2	7.7	3.6	chr9	35488384	35488990	(102905727)	C	MER51A	LTR/ERV1	(0)	634	1	4058936
565	6.6	0.0	2.6	chr9	35488991	35489068	(102905649)	C	MER50B	LTR/ERV1	(621)	76	1	4058935
2059	14.4	7.2	0.0	chr9	35489069	35489415	(102905302)	+	THE1D	LTR/ERVL-MaLR	8	381	(0)	4058937
305	33.5	12.2	0.0	chr9	35676506	35676678	(102718039)	C	L2c	LINE/L2	(0)	3387	3179	4059281
188	36.9	12.2	0.0	chr9	35814039	35814168	(102580549)	+	MIR3	SINE/MIR	20	167	(41)	4059467
253	25.9	0.0	1.7	chr9	36748238	36748296	(101646421)	+	MIRb	SINE/MIR	206	263	(5)	4061380
423	21.5	1.0	21.7	chr9	36757586	36757829	(101636888)	C	MER53	DNA/hAT	(0)	193	1	4061398
930	26.8	5.7	4.5	chr9	36757830	36758117	(101636600)	C	MLT1J1	LTR/ERVL-MaLR	(116)	328	37	4061397
50	0.0	0.0	0.0	chr9	36758130	36758172	(101636545)	+	(AC)n	Simple_repeat	1	43	(0)	4061399
321	17.6	6.3	1.3	chr9	36765832	36765906	(101628811)	+	L2b	LINE/L2	3297	3375	(0)	4061416
19	17.5	2.7	7.8	chr9	37027606	37027680	(101367037)	+	(GCC)n	Simple_repeat	1	77	(0)	4061903
222	30.4	1.4	4.2	chr9	37464626	37464697	(100930020)	+	L2a	LINE/L2	3348	3417	(9)	4062717
236	22.0	0.0	0.0	chr9	37920425	37920474	(100474243)	C	MIRc	SINE/MIR	(94)	174	125	4063651
414	18.4	8.1	1.3	chr9	37920475	37920626	(100474091)	+	MLT1J1	LTR/ERVL-MaLR	1	178	(334)	4063652
736	14.2	0.5	0.1	chr9	40922619	40931549	(97463168)	+	CER	Satellite	1	8959	(0)	4067938
1076	27.3	2.2	2.8	chr9	68559651	68559974	(69834743)	C	LTR16	LTR/ERVL	(0)	438	117	4080032
349	25.2	9.4	0.0	chr9	68559986	68560100	(69834617)	C	LTR50	LTR/ERVL	(343)	452	326	4080033
268	26.8	2.8	1.1	chr9	68560159	68560263	(69834454)	C	LTR50	LTR/ERVL	(587)	208	102	4080033
407	31.0	1.4	2.0	chr9	68560307	68560454	(69834263)	+	MER102b	DNA/hAT-Charlie	171	317	(24)	4080034
12	25.8	0.0	0.0	chr9	71446731	71446767	(66947950)	+	(CCGGCT)n	Simple_repeat	1	37	(0)	4084666
16	20.0	2.5	0.0	chr9	71910975	71911014	(66483703)	+	(CCG)n	Simple_repeat	1	41	(0)	4085498
16	13.2	4.4	4.3	chr9	72364921	72364965	(66029752)	+	GA-rich	Low_complexity	1	47	(0)	4086363
18	11.0	4.9	2.3	chr9	72365284	72365324	(66029393)	+	(CGG)n	Simple_repeat	1	43	(0)	4086364
13	5.3	0.0	0.0	chr9	74952304	74952323	(63442394)	+	(GGC)n	Simple_repeat	1	20	(0)	4090268
1752	28.5	8.2	4.6	chr9	75190254	75190851	(63203866)	C	HAL1	LINE/L1	(1015)	1492	870	4090697
394	28.4	6.2	3.6	chr9	75190852	75191051	(63203666)	+	LTR33B	LTR/ERVL	1	212	(408)	4090699
18	17.2	0.0	5.9	chr9	76394543	76394593	(62000124)	+	(GCCCC)n	Simple_repeat	1	51	(0)	4092455
1359	26.5	5.7	1.0	chr9	77447528	77447931	(60946786)	C	MLT1J2	LTR/ERVL-MaLR	(2)	446	23	4094291
784	26.0	4.2	1.0	chr9	77448040	77448245	(60946472)	+	MER58A	DNA/hAT-Charlie	9	221	(3)	4094292
431	21.5	5.1	1.5	chr9	79974938	79975069	(58419648)	C	LTR33B	LTR/ERVL	(39)	464	328	4098022
500	27.1	6.6	0.0	chr9	79975121	79975319	(58419398)	C	LTR33B	LTR/ERVL	(288)	215	3	4098022
13	16.2	10.4	0.0	chr9	81689119	81689166	(56705551)	+	(CCTT)n	Simple_repeat	1	53	(0)	4100304
330	21.0	11.8	9.3	chr9	81689313	81689527	(56705190)	C	MER52D	LTR/ERV1	(1852)	271	51	4100305
12	27.6	2.3	0.0	chr9	83062526	83062569	(55332148)	+	(CGT)n	Simple_repeat	1	45	(0)	4102320
16	23.3	1.3	7.7	chr9	83622940	83623016	(54771701)	+	G-rich	Low_complexity	1	78	(0)	4103205
180	18.2	0.0	0.0	chr9	83623330	83623362	(54771355)	C	MIR3	SINE/MIR	(60)	148	116	4103206
12	23.6	4.4	0.0	chr9	83707852	83707896	(54686821)	+	(GGCGCA)n	Simple_repeat	1	47	(0)	4103351
13	9.7	9.1	0.0	chr9	83708270	83708302	(54686415)	+	(TGCGCGC)n	Simple_repeat	1	36	(0)	4103352
221	32.5	0.0	1.1	chr9	83981378	83981464	(54413253)	C	L2a	LINE/L2	(42)	3384	3299	4103853
375	22.0	1.0	2.8	chr9	86701338	86701442	(51693275)	+	MLT2F	LTR/ERVL	3	148	(355)	4108321
1287	24.6	5.6	1.7	chr9	86701480	86701839	(51692878)	+	MLT2F	LTR/ERVL	289	663	(0)	4108321
598	32.2	8.6	4.6	chr9	87445707	87446187	(50948530)	+	MLT1J	LTR/ERVL-MaLR	1	502	(10)	4109494
462	20.6	0.0	2.1	chr9	87814178	87814271	(50580446)	C	MLT1I	LTR/ERVL-MaLR	(5)	406	315	4110039
402	20.9	8.3	1.4	chr9	87814404	87814537	(50580180)	C	MLT1I	LTR/ERVL-MaLR	(308)	140	1	4110039
2080	12.8	1.0	3.2	chr9	88644997	88645309	(49749408)	+	AluSx	SINE/Alu	1	306	(6)	4111524
16	7.6	3.6	0.0	chr9	88645314	88645341	(49749376)	+	(CAAA)n	Simple_repeat	1	29	(0)	4111525
493	21.6	4.3	0.9	chr9	88645342	88645453	(49749264)	C	MLT1J2	LTR/ERVL-MaLR	(282)	166	51	4111523
2286	11.8	0.0	0.0	chr9	91025588	91025892	(47368825)	C	AluSg7	SINE/Alu	(4)	305	1	4114591
347	24.2	3.7	7.7	chr9	91025893	91026022	(47368695)	+	MLT1J	LTR/ERVL-MaLR	43	167	(345)	4114590
12	12.0	3.7	0.0	chr9	91026153	91026179	(47368538)	+	GA-rich	Low_complexity	1	28	(0)	4114592
631	26.1	8.4	3.4	chr9	91238258	91238551	(47156166)	C	MLT1J	LTR/ERVL-MaLR	(202)	310	1	4114895
373	26.0	7.7	1.1	chr9	92293171	92293356	(46101361)	+	L1ME4b	LINE/L1	398	599	(231)	4116476
27	3.5	0.0	0.0	chr9	92764802	92764831	(45629886)	+	(GCC)n	Simple_repeat	1	30	(0)	4117178
15	23.4	3.4	3.3	chr9	92764841	92764899	(45629818)	+	(CGCC)n	Simple_repeat	1	61	(0)	4117179
2122	17.2	5.2	2.8	chr9	93071137	93071682	(45323035)	C	MLT2A2	LTR/ERVL	(0)	554	1	4117657
432	27.4	6.2	3.6	chr9	93071683	93071819	(45322898)	C	MLT1J	LTR/ERVL-MaLR	(310)	202	62	4117658
189	34.6	7.3	1.0	chr9	93128320	93128421	(45266296)	C	MIR1_Amn	SINE/MIR	(45)	185	77	4117760
31	34.8	0.8	1.5	chr9	93128800	93128930	(45265787)	+	(CA)n	Simple_repeat	1	132	(0)	4117761
13	13.2	6.1	0.0	chr9	93566861	93566893	(44827824)	+	(GAGCCC)n	Simple_repeat	1	35	(0)	4118315
2181	10.0	0.7	0.0	chr9	94623005	94623284	(43771433)	C	AluSz	SINE/Alu	(30)	282	1	4119953
248	35.2	0.9	3.7	chr9	94623394	94623502	(43771215)	+	MIRb	SINE/MIR	116	221	(47)	4119954
12	23.5	1.8	5.4	chr9	95317779	95317833	(43076884)	+	G-rich	Low_complexity	1	56	(0)	4121019
434	25.8	1.9	3.0	chr9	95553314	95553477	(42841240)	+	MER5B	DNA/hAT-Charlie	1	162	(16)	4121376
15	13.9	3.1	0.0	chr9	95553495	95553526	(42841191)	+	(GCC)n	Simple_repeat	1	33	(0)	4121377
929	26.9	10.7	0.8	chr9	95775120	95775508	(42619209)	C	MLT1J	LTR/ERVL-MaLR	(71)	441	10	4121726
1759	12.0	7.7	1.7	chr9	98256345	98256636	(40138081)	C	AluJr	SINE/Alu	(0)	312	2	4126183
536	18.4	23.9	3.6	chr9	98257085	98257309	(40137408)	+	Arthur1C	DNA/hAT-Tip100	79	363	(0)	4126184
459	22.8	2.5	1.3	chr9	98410339	98410468	(39984249)	+	LTR33B	LTR/ERVL	15	146	(385)	4126450
18	4.8	0.0	0.0	chr9	98410506	98410527	(39984190)	+	(T)n	Simple_repeat	1	22	(0)	4126451
13	16.6	0.0	0.0	chr9	98410664	98410690	(39984027)	+	(AGC)n	Simple_repeat	1	27	(0)	4126452
289	18.0	0.0	0.0	chr9	98410790	98410839	(39983878)	C	LTR33A	LTR/ERVL	(1)	519	470	4126453
523	27.8	6.0	7.0	chr9	99294928	99295213	(39099504)	+	MLT1J	LTR/ERVL-MaLR	30	312	(200)	4128180
16	19.1	0.0	4.3	chr9	100098878	100098923	(38295794)	+	(GGCTG)n	Simple_repeat	1	46	(0)	4129547
2209	21.4	11.5	3.7	chr9	100601221	100601924	(37792793)	+	LTR41	LTR/ERVL	3	768	(0)	4130448
952	26.5	15.1	6.2	chr9	100838603	100839057	(37555660)	C	LTR33B	LTR/ERVL	(0)	503	1	4130770
12	24.5	1.4	8.1	chr9	100839097	100839169	(37555548)	+	(TTCAATT)n	Simple_repeat	1	74	(0)	4130771
1053	27.8	6.0	4.3	chr9	101072103	101072542	(37322175)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	1	4131136
446	28.4	13.1	7.6	chr9	107942774	107943181	(30451536)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	15	4141919
821	26.5	5.0	0.9	chr9	108241411	108241642	(30153075)	C	MLT1J1	LTR/ERVL-MaLR	(167)	277	36	4142423
899	25.3	2.6	0.0	chr9	109120381	109120605	(29274112)	C	MIR	SINE/MIR	(26)	236	6	4143828
697	27.9	9.3	7.9	chr9	109743014	109743456	(28651261)	+	L1M6	LINE/L1	310	759	(5737)	4145039
484	30.6	15.8	13.1	chr9	110464227	110464992	(27929725)	C	L1M6	LINE/L1	(5649)	847	57	4146310
13	27.4	0.0	6.2	chr9	111484194	111484257	(26910460)	+	G-rich	Low_complexity	1	64	(0)	4147933
12	28.1	1.7	3.3	chr9	111525290	111525348	(26869369)	+	G-rich	Low_complexity	1	60	(0)	4148038
14	3.7	10.7	0.0	chr9	111525365	111525392	(26869325)	+	(GCT)n	Simple_repeat	1	31	(0)	4148039
712	21.8	1.6	10.1	chr9	111525455	111525663	(26869054)	C	MER20	DNA/hAT-Charlie	(12)	207	17	4148040
207	32.7	7.6	0.9	chr9	111525722	111525832	(26868885)	+	L2a	LINE/L2	3308	3426	(0)	4148041
626	25.3	11.1	0.9	chr9	112592380	112592606	(25802111)	+	MIR	SINE/MIR	2	254	(8)	4150158
228	16.4	8.3	0.0	chr9	112592840	112592894	(25801823)	+	L1ME3G	LINE/L1	534	593	(331)	4150159
20	20.0	1.4	5.6	chr9	112718283	112718352	(25676365)	+	G-rich	Low_complexity	1	71	(0)	4150361
18	0.0	0.0	0.0	chr9	113150983	113151004	(25243713)	+	(GCG)n	Simple_repeat	1	22	(0)	4151083
15	9.4	5.6	2.6	chr9	114504708	114504743	(23889974)	+	(GCCCCC)n	Simple_repeat	1	38	(0)	4153793
851	12.0	0.8	0.8	chr9	114610940	114611064	(23783653)	+	AluJr	SINE/Alu	1	125	(187)	4154051
16	26.2	1.3	5.3	chr9	114611397	114611471	(23783246)	+	G-rich	Low_complexity	1	76	(0)	4154052
26	0.0	0.0	0.0	chr9	114611534	114611558	(23783159)	+	(GGC)n	Simple_repeat	1	25	(0)	4154053
227	26.6	8.9	2.6	chr9	114969275	114969390	(23425327)	+	L2b	LINE/L2	3251	3374	(1)	4154773
879	30.4	7.5	4.0	chr9	114969399	114969875	(23424842)	+	MLT1J	LTR/ERVL-MaLR	5	499	(13)	4154774
457	27.9	13.4	7.8	chr9	115236804	115237542	(23157175)	C	LTR33A	LTR/ERVL	(9)	786	1	4155257
1470	31.1	11.7	4.5	chr9	120023436	120024041	(18370676)	C	L1ME4a	LINE/L1	(5344)	1152	469	4164182
44	0.0	0.0	0.0	chr9	120024042	120024079	(18370638)	+	(AC)n	Simple_repeat	1	38	(0)	4164189
1470	31.1	11.7	4.5	chr9	120024080	120024527	(18370190)	C	L1ME4a	LINE/L1	(6028)	468	12	4164182
916	26.7	8.6	1.7	chr9	120160462	120160811	(18233906)	C	MLT1J2	LTR/ERVL-MaLR	(57)	391	44	4164481
219	32.9	6.9	5.8	chr9	120161002	120161172	(18233545)	+	MIR3	SINE/MIR	33	205	(3)	4164482
208	22.7	4.3	0.0	chr9	121546298	121546341	(16848376)	+	MIR3	SINE/MIR	109	154	(54)	4167229
690	20.8	1.4	0.0	chr9	121546353	121546496	(16848221)	C	MER5A1	DNA/hAT-Charlie	(0)	166	21	4167230
37	33.8	1.4	3.7	chr9	122093034	122093247	(16301470)	+	(CCG)n	Simple_repeat	1	217	(0)	4168287
188	28.0	0.0	0.0	chr9	122346664	122346713	(16048004)	+	L2b	LINE/L2	3301	3350	(25)	4168864
12	8.1	3.6	3.5	chr9	122347045	122347072	(16047645)	+	G-rich	Low_complexity	1	29	(0)	4168865
14	24.8	1.3	7.7	chr9	123929927	123930003	(14464714)	+	(GCCC)n	Simple_repeat	1	78	(0)	4171513
12	5.5	0.0	0.0	chr9	123930054	123930072	(14464645)	+	(CGC)n	Simple_repeat	1	19	(0)	4171514
24	26.3	0.0	3.7	chr9	123930114	123930207	(14464510)	+	(CGC)n	Simple_repeat	1	90	(0)	4171514
14	13.3	7.0	2.2	chr9	123930228	123930270	(14464447)	+	G-rich	Low_complexity	1	46	(0)	4171515
484	36.0	4.3	3.8	chr9	124110555	124110664	(14284053)	C	MIRb	SINE/MIR	(14)	254	145	4171951
260	31.1	2.9	3.6	chr9	124868723	124868859	(13525858)	+	L2b	LINE/L2	3071	3206	(169)	4173428
16	15.3	0.0	5.0	chr9	124869136	124869175	(13525542)	+	(GGC)n	Simple_repeat	1	40	(0)	4173429
19	13.2	4.5	7.1	chr9	124869211	124869277	(13525440)	+	(GAGCG)n	Simple_repeat	1	70	(0)	4173430
14	11.3	7.5	2.3	chr9	125261781	125261820	(13132897)	+	(GCGCTGC)n	Simple_repeat	1	43	(0)	4174296
12	26.4	5.3	5.0	chr9	125261805	125261899	(13132818)	+	(GCGGCA)n	Simple_repeat	1	100	(0)	4174297
61	9.4	0.0	0.0	chr9	126082982	126083072	(12311645)	+	(TGTG)n	Simple_repeat	1	91	(0)	4175820
21	30.9	1.5	5.9	chr9	126157241	126157374	(12237343)	+	(TCTT)n	Simple_repeat	1	136	(0)	4175953
871	19.6	24.6	0.9	chr9	126303471	126303805	(12090912)	C	MLT1J1	LTR/ERVL-MaLR	(4)	440	1	4176213
19	14.9	0.0	0.0	chr9	127424461	127424497	(10970220)	+	(GTTGCCA)n	Simple_repeat	1	37	(0)	4178181
1981	9.6	3.5	1.4	chr9	127448833	127449114	(10945603)	C	AluSz	SINE/Alu	(14)	298	11	4178230
200	30.9	4.7	1.2	chr9	127451080	127451161	(10943556)	C	MIR3	SINE/MIR	(43)	165	81	4178232
26	9.9	0.0	0.0	chr9	127785879	127785921	(10608796)	+	(GGC)n	Simple_repeat	1	43	(0)	4179014
39	29.1	1.2	4.1	chr9	127785978	127786147	(10608570)	+	(GGC)n	Simple_repeat	1	172	(0)	4179014
26	21.7	2.4	3.5	chr9	127802798	127802882	(10591835)	+	(GGCGG)n	Simple_repeat	1	87	(0)	4179046
17	10.7	0.0	0.0	chr9	127877746	127877775	(10516942)	+	(AGGG)n	Simple_repeat	1	30	(0)	4179227
229	32.3	8.7	3.2	chr9	127930409	127930556	(10464161)	C	MIR	SINE/MIR	(7)	261	92	4179358
210	32.4	2.6	0.0	chr9	128203054	128203127	(10191590)	+	MIR1_Amn	SINE/MIR	91	166	(64)	4179970
2376	5.2	1.7	0.7	chr9	128887652	128887940	(9506777)	C	AluY	SINE/Alu	(18)	293	2	4181574
4020	8.5	1.5	2.5	chr9	129101281	129101834	(9292883)	+	LTR14	LTR/ERVK	1	548	(0)	4182093
219	35.3	4.9	3.7	chr9	129208535	129208778	(9185939)	+	L2c	LINE/L2	2704	2950	(469)	4182321
281	35.2	12.3	0.7	chr9	129208848	129209083	(9185634)	+	L2c	LINE/L2	3094	3340	(35)	4182321
15	22.7	3.3	3.2	chr9	129258476	129258535	(9136182)	+	(GCCCC)n	Simple_repeat	1	62	(0)	4182436
306	27.2	4.2	2.5	chr9	129268590	129268751	(9125966)	C	L1ME4a	LINE/L1	(2)	6122	5958	4182462
1426	26.6	3.0	3.9	chr9	129268756	129269190	(9125527)	+	MLT1J2	LTR/ERVL-MaLR	3	433	(15)	4182463
1376	24.4	10.4	4.1	chr9	129317619	129318033	(9076684)	+	MLT1J2	LTR/ERVL-MaLR	1	444	(4)	4182557
336	34.0	9.9	0.0	chr9	129330518	129330717	(9064000)	+	MER103C	DNA/hAT-Charlie	70	291	(6)	4182585
2190	20.6	11.7	1.0	chr9	129330763	129331248	(9063469)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	4	4182586
2362	10.5	0.0	0.3	chr9	129335218	129335523	(9059194)	+	AluSq2	SINE/Alu	6	310	(3)	4182592
577	30.0	9.7	5.6	chr9	129434104	129434498	(8960219)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	100	4182814
322	33.6	0.0	0.8	chr9	129434429	129434557	(8960160)	C	LTR67B	LTR/ERVL	(465)	155	28	4182815
1535	26.3	3.9	0.2	chr9	129584150	129584572	(8810145)	+	MLT1J	LTR/ERVL-MaLR	36	474	(38)	4183189
228	28.2	2.3	4.5	chr9	129596336	129596424	(8798293)	+	MIRc	SINE/MIR	107	193	(75)	4183213
323	31.7	8.8	2.0	chr9	129626577	129626724	(8767993)	+	MIRb	SINE/MIR	102	260	(8)	4183281
613	17.9	0.0	0.9	chr9	130240712	130240818	(8153899)	+	MLT1J	LTR/ERVL-MaLR	70	175	(337)	4184633
350	24.3	10.6	8.2	chr9	130240849	130241032	(8153685)	+	MLT1J	LTR/ERVL-MaLR	321	509	(3)	4184633
752	29.1	14.3	4.6	chr9	130387244	130387701	(8007016)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	1	4184922
812	14.5	0.8	1.5	chr9	130387798	130387928	(8006789)	+	AluJb	SINE/Alu	5	134	(178)	4184923
2019	16.0	0.0	1.6	chr9	130548819	130549131	(7845586)	+	AluJb	SINE/Alu	1	308	(4)	4185282
937	22.1	32.1	0.3	chr9	130549160	130549445	(7845272)	+	MLT1J2	LTR/ERVL-MaLR	12	388	(60)	4185283
1513	10.7	0.4	0.0	chr9	130549456	130549680	(7845037)	+	MER57B1	LTR/ERV1	1	226	(175)	4185284
629	27.1	7.3	3.4	chr9	130950895	130951158	(7443559)	+	LTR16C	LTR/ERVL	177	451	(38)	4186077
2227	8.0	0.0	1.7	chr9	131376067	131376368	(7018349)	+	AluSx	SINE/Alu	1	297	(15)	4186955
493	32.2	6.5	0.9	chr9	131376369	131376443	(7018274)	+	MIRb	SINE/MIR	185	258	(10)	4186953
682	23.1	3.0	0.0	chr9	131376444	131376603	(7018114)	+	MLT1J2	LTR/ERVL-MaLR	1	165	(283)	4186956
1531	17.7	0.3	1.1	chr9	131376745	131377027	(7017690)	+	AluJo	SINE/Alu	21	301	(11)	4186957
15	20.4	1.5	7.6	chr9	131531183	131531247	(6863470)	+	(CCGCGC)n	Simple_repeat	1	66	(0)	4187226
1627	23.3	2.1	4.9	chr9	131803663	131803899	(6590818)	+	MLT1J2	LTR/ERVL-MaLR	49	263	(185)	4187752
1143	22.9	2.7	0.0	chr9	131803900	131804117	(6590600)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	4187753
182	34.3	8.2	3.6	chr9	132114176	132114314	(6280403)	+	L2a	LINE/L2	3252	3397	(29)	4188254
229	35.6	8.4	2.2	chr9	132114385	132114562	(6280155)	C	L2b	LINE/L2	(255)	3120	2931	4188255
18	27.5	0.0	0.0	chr9	132582025	132582072	(5812645)	+	GA-rich	Low_complexity	1	48	(0)	4189187
759	12.0	4.0	7.2	chr9	133031186	133031338	(5363379)	C	LTR10B	LTR/ERV1	(0)	547	400	4189956
12	17.8	0.0	12.3	chr9	133375687	133375751	(5018966)	+	G-rich	Low_complexity	1	65	(0)	4190474
14	26.3	4.9	3.5	chr9	133375819	133375900	(5018817)	+	G-rich	Low_complexity	1	86	(0)	4190475
20	8.8	7.7	3.6	chr9	133375984	133376035	(5018682)	+	(GCTC)n	Simple_repeat	1	56	(0)	4190476
281	29.2	15.6	0.8	chr9	133439143	133439273	(4955444)	C	L3	LINE/CR1	(22)	4077	3924	4190585
1503	22.8	18.7	0.2	chr9	133439473	133440034	(4954683)	C	MER77B	LTR/ERVL	(6)	694	5	4190586
432	28.1	12.6	1.5	chr9	133609631	133609826	(4784891)	+	MIRb	SINE/MIR	49	268	(0)	4190835
310	30.1	3.6	0.9	chr9	133656151	133656271	(4738446)	+	MIRb	SINE/MIR	52	175	(93)	4190904
334	32.6	3.6	0.8	chr9	133656252	133656384	(4738333)	+	L2a	LINE/L2	3197	3333	(93)	4190905
1107	25.8	3.8	3.5	chr9	135139329	135139697	(3255020)	C	MLT1J	LTR/ERVL-MaLR	(107)	405	36	4192813
4550	9.0	3.4	0.3	chr9	135295677	135296267	(3098450)	+	LTR71B	LTR/ERV1	1	610	(0)	4193010
31	25.7	3.5	1.7	chr9	135961271	135961384	(2433333)	+	(GCC)n	Simple_repeat	1	118	(0)	4193846
828	21.4	6.0	0.0	chr9	135961603	135961836	(2432881)	+	MER33	DNA/hAT-Charlie	76	324	(0)	4193847
354	9.4	0.0	1.5	chr9	135972326	135972390	(2422327)	C	L1MB3	LINE/L1	(7)	6176	6113	4193867
11	27.1	2.3	0.0	chr9	136118138	136118181	(2276536)	+	(GGCCCT)n	Simple_repeat	1	45	(0)	4194045
16	23.9	0.0	8.6	chr9	136118353	136118433	(2276284)	+	(GCGCC)n	Simple_repeat	1	81	(0)	4194046
17	9.4	2.8	2.7	chr9	136205161	136205196	(2189521)	+	(CGCC)n	Simple_repeat	1	37	(0)	4194150
11	17.1	2.9	2.8	chr9	136363573	136363607	(2031110)	+	(GCCCCA)n	Simple_repeat	1	36	(0)	4194302
15	13.2	6.8	2.1	chr9	136363715	136363758	(2030959)	+	(CCCGC)n	Simple_repeat	1	47	(0)	4194303
236	23.7	8.5	1.7	chr9	136400372	136400491	(1994226)	+	MIRb	SINE/MIR	18	146	(122)	4194334
12	26.5	3.2	3.1	chr9	136410607	136410668	(1984049)	+	(AGCGGA)n	Simple_repeat	1	64	(0)	4194344
17	22.2	2.8	5.5	chr9	136439816	136439886	(1954831)	+	(GCCCC)n	Simple_repeat	1	73	(0)	4194378
11	21.5	6.0	1.9	chr9	136483793	136483842	(1910875)	+	(GCGGCC)n	Simple_repeat	1	53	(0)	4194420
16	13.9	2.3	4.5	chr9	136561862	136561904	(1832813)	+	(CCGTGG)n	Simple_repeat	1	44	(0)	4194494
225	31.7	6.5	3.1	chr9	136562480	136562704	(1832013)	+	MIR1_Amn	SINE/MIR	3	241	(21)	4194495
866	26.6	13.2	1.6	chr9	136773829	136774210	(1620507)	+	MLT1J	LTR/ERVL-MaLR	78	510	(2)	4194788
15	28.2	1.1	6.5	chr9	136848951	136849042	(1545675)	+	G-rich	Low_complexity	1	93	(0)	4194875
12	20.2	2.9	0.0	chr9	136944255	136944288	(1450429)	+	G-rich	Low_complexity	1	35	(0)	4195030
2201	11.1	1.3	0.0	chr9	137046811	137047108	(1347609)	C	AluSx	SINE/Alu	(9)	303	2	4195149
17	26.8	1.4	4.1	chr9	137139145	137139216	(1255501)	+	(GCC)n	Simple_repeat	1	73	(0)	4195291
13	18.1	0.0	7.0	chr9	137240441	137240446	(1154271)	+	(GCCCC)n	Simple_repeat	1	13	(30)	4195375
17	7.9	0.0	0.0	chr9	137240447	137240473	(1154244)	+	(CCCCT)n	Simple_repeat	1	27	(0)	4195376
13	18.1	0.0	7.0	chr9	137240474	137240483	(1154234)	+	(GCCCC)n	Simple_repeat	14	43	(0)	4195375
918	18.7	11.3	0.0	chr9	137294334	137294568	(1100149)	+	MLT1J	LTR/ERVL-MaLR	42	306	(206)	4195471
1971	10.5	1.1	2.5	chrX	1381929	1382248	(154658647)	C	AluSx3	SINE/Alu	(0)	311	1	4360865
256	12.2	0.0	0.0	chrX	1382249	1382289	(154658606)	C	Alu	SINE/Alu	(92)	41	1	4360866
15	12.9	2.8	2.7	chrX	1452708	1452743	(154588152)	+	(CCGGCC)n	Simple_repeat	1	37	(0)	4361000
455	27.2	11.4	6.1	chrX	3295738	3295968	(152744927)	C	MLT1J2	LTR/ERVL-MaLR	(140)	308	64	4364614
354	25.4	6.8	5.2	chrX	4944908	4945072	(151095823)	C	LTR33B	LTR/ERVL	(348)	183	6	4367653
1197	20.4	0.9	0.9	chrX	7370855	7371065	(148669830)	+	AluJo	SINE/Alu	84	294	(18)	4371605
484	26.9	7.6	0.0	chrX	7371084	7371217	(148669678)	C	MLT1E	LTR/ERVL-MaLR	(342)	170	26	4371602
788	28.3	3.0	3.0	chrX	11110297	11110598	(144930297)	C	LTR16A	LTR/ERVL	(91)	360	59	4377505
965	22.2	0.0	1.0	chrX	13284621	13284825	(142756070)	+	MLT1J2	LTR/ERVL-MaLR	3	205	(243)	4380938
3901	18.7	5.2	7.1	chrX	13284836	13286014	(142754881)	+	LTR28	LTR/ERV1	1	1042	(87)	4380939
575	21.8	5.3	5.3	chrX	13429974	13430123	(142610772)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	461	4381154
243	26.5	5.2	0.8	chrX	13430250	13430369	(142610526)	C	MLT1L	LTR/ERVL-MaLR	(328)	282	100	4381154
862	16.6	1.4	0.7	chrX	13492430	13492569	(142548326)	C	MLT1J2	LTR/ERVL-MaLR	(306)	142	2	4381263
400	25.4	6.1	6.6	chrX	13492570	13492765	(142548130)	+	Charlie25	DNA/hAT-Charlie	2327	2521	(3)	4381264
1304	26.0	4.1	8.0	chrX	13980737	13981250	(142059645)	C	MLT1J	LTR/ERVL-MaLR	(3)	509	17	4382075
215	24.4	14.0	0.0	chrX	13981266	13981351	(142059544)	+	MIRb	SINE/MIR	116	215	(53)	4382076
803	26.0	26.2	0.9	chrX	16416498	16416845	(139624050)	C	MLT1J2	LTR/ERVL-MaLR	(6)	438	1	4385969
791	28.9	6.4	3.3	chrX	16771508	16771808	(139269087)	+	AluJb	SINE/Alu	2	312	(0)	4386663
291	25.3	4.6	12.1	chrX	16772253	16772379	(139268516)	+	L1ME4a	LINE/L1	5846	5958	(166)	4386664
388	29.5	8.0	0.5	chrX	17247096	17247279	(138793616)	+	L3	LINE/CR1	3292	3490	(609)	4387545
1252	24.6	8.1	2.1	chrX	17247309	17247448	(138793447)	+	MLT1J1	LTR/ERVL-MaLR	59	198	(246)	4387546
2405	11.8	0.0	1.0	chrX	17247449	17247761	(138793134)	C	AluSz	SINE/Alu	(1)	311	2	4387547
259	17.9	5.1	1.8	chrX	17651431	17651487	(138389408)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	390	4388201
1057	19.6	6.5	3.4	chrX	17651556	17651793	(138389102)	C	MLT1J2	LTR/ERVL-MaLR	(196)	252	7	4388201
1061	31.0	5.4	2.1	chrX	17923459	17923923	(138116972)	C	MLT1J	LTR/ERVL-MaLR	(31)	481	1	4388575
16	0.0	4.3	0.0	chrX	17923963	17923985	(138116910)	+	(GTTT)n	Simple_repeat	1	24	(0)	4388576
647	35.8	0.4	5.1	chrX	18145962	18146114	(137894781)	C	MIRc	SINE/MIR	(3)	265	118	4388966
1161	27.9	7.8	3.0	chrX	18146115	18146540	(137894355)	+	MLT1J2	LTR/ERVL-MaLR	1	448	(0)	4388967
234	14.7	21.9	1.3	chrX	19410370	19410445	(136630450)	+	LTR67B	LTR/ERVL	26	121	(499)	4391306
735	25.7	4.9	0.0	chrX	19410386	19410560	(136630335)	+	MLT1J2	LTR/ERVL-MaLR	38	221	(227)	4391307
580	19.3	4.0	1.6	chrX	19410572	19410692	(136630203)	+	MLT1J2	LTR/ERVL-MaLR	323	446	(2)	4391307
629	27.0	8.3	1.5	chrX	20427624	20427826	(135613069)	C	LTR33A	LTR/ERVL	(281)	250	33	4393147
15	8.8	0.0	0.0	chrX	21374132	21374155	(134666740)	+	(CGC)n	Simple_repeat	1	24	(0)	4394393
189	9.7	3.1	0.0	chrX	22925320	22925350	(133115545)	+	L2b	LINE/L2	3338	3369	(6)	4396713
699	32.0	2.6	0.4	chrX	22925463	22925691	(133115204)	+	LTR33B	LTR/ERVL	9	242	(261)	4396714
651	19.2	6.5	0.0	chrX	22925690	22925819	(133115076)	+	LTR33B	LTR/ERVL	353	491	(12)	4396714
513	24.5	9.5	1.4	chrX	24426387	24426531	(131614364)	+	LTR67B	LTR/ERVL	11	168	(452)	4399490
613	25.6	15.7	8.4	chrX	32026809	32027106	(124013789)	C	MLT1J2	LTR/ERVL-MaLR	(124)	324	1	4410698
28	10.8	0.0	0.0	chrX	32027144	32027184	(124013711)	+	(AC)n	Simple_repeat	1	41	(0)	4410699
30	17.7	1.7	0.0	chrX	32027184	32027241	(124013654)	+	GA-rich	Low_complexity	1	59	(0)	4410700
11	7.5	6.7	3.1	chrX	37685777	37685806	(118355089)	+	(CCAGGT)n	Simple_repeat	1	32	(0)	4417771
15	28.4	0.0	4.6	chrX	37685891	37685955	(118354940)	+	(GCC)n	Simple_repeat	1	65	(0)	4417772
1395	23.6	15.0	2.0	chrX	38123919	38124359	(117916536)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	5	4418451
345	29.2	7.1	6.8	chrX	39501880	39502158	(116538737)	+	LTR67B	LTR/ERVL	4	283	(337)	4420641
606	31.1	5.7	5.9	chrX	39501950	39502404	(116538491)	+	MLT1N2	LTR/ERVL-MaLR	100	553	(9)	4420642
1046	22.8	4.0	0.0	chrX	39573995	39574231	(116466664)	+	MLT1G1	LTR/ERVL-MaLR	333	579	(0)	4420767
683	26.7	12.6	0.7	chrX	39574288	39574566	(116466329)	+	MLT1J2	LTR/ERVL-MaLR	1	317	(131)	4420771
875	23.8	8.3	2.7	chrX	39638461	39638847	(116402048)	C	MLT1J	LTR/ERVL-MaLR	(65)	447	1	4420887
1410	23.3	8.8	5.7	chrX	39682854	39683326	(116357569)	+	MLT1H2	LTR/ERVL-MaLR	1	489	(0)	4420973
1343	27.1	4.7	4.9	chrX	39749758	39750249	(116290646)	+	MLT1J	LTR/ERVL-MaLR	3	493	(19)	4421106
236	20.0	0.0	0.0	chrX	39782299	39782353	(116258542)	C	HAL1ME	LINE/L1	(752)	1713	1659	4421173
507	28.0	9.2	0.0	chrX	39782360	39782527	(116258368)	+	LTR50	LTR/ERVL	1	185	(610)	4421174
1678	25.4	8.3	1.9	chrX	39955732	39956216	(116084679)	+	LTR33A	LTR/ERVL	2	520	(0)	4421516
451	20.0	1.1	0.0	chrX	40383246	40383335	(115657560)	C	MLT1J1	LTR/ERVL-MaLR	(108)	336	246	4422351
424	22.7	2.2	0.0	chrX	40383337	40383424	(115657471)	C	MER81	DNA/hAT-Blackjack	(21)	93	4	4422352
924	22.1	5.7	4.9	chrX	40383428	40383670	(115657225)	C	MLT1J1	LTR/ERVL-MaLR	(193)	251	7	4422351
1394	24.7	6.5	4.7	chrX	40392737	40393161	(115647734)	+	MLT2F	LTR/ERVL	1	433	(230)	4422368
1369	28.7	6.6	0.8	chrX	40996809	40997276	(115043619)	C	MLT1J	LTR/ERVL-MaLR	(7)	505	9	4423450
745	19.6	2.1	0.0	chrX	42300826	42300963	(113739932)	+	MLT2F	LTR/ERVL	1	141	(522)	4425804
1021	21.2	11.1	10.1	chrX	42301025	42301381	(113739514)	+	MLT2F	LTR/ERVL	303	663	(0)	4425804
2349	9.1	0.0	1.0	chrX	43603777	43604074	(112436821)	+	AluY	SINE/Alu	2	296	(15)	4427569
1026	23.3	21.0	0.0	chrX	43604088	43604523	(112436372)	+	MLT2F	LTR/ERVL	1	537	(126)	4427570
2024	15.8	6.1	8.3	chrX	44543240	44543623	(111497272)	+	MER31B	LTR/ERV1	1	381	(85)	4429098
1780	24.7	4.0	2.1	chrX	44651244	44651711	(111389184)	C	LTR33A	LTR/ERVL	(43)	477	1	4429387
12	7.7	0.0	9.1	chrX	44872809	44872841	(111168054)	+	(CCTCC)n	Simple_repeat	1	33	(0)	4429938
16	22.5	1.6	6.2	chrX	47219042	47219105	(108821790)	+	(GCC)n	Simple_repeat	1	65	(0)	4433621
12	20.1	4.1	3.9	chrX	47619918	47619966	(108420929)	+	(CGCGG)n	Simple_repeat	1	51	(0)	4434536
351	33.8	3.3	1.3	chrX	48475691	48475840	(107565055)	C	MIR	SINE/MIR	(69)	193	41	4436153
15	18.1	0.0	0.0	chrX	48696543	48696574	(107344321)	+	(CCG)n	Simple_repeat	1	32	(0)	4436655
23	25.9	1.4	1.4	chrX	48957477	48957547	(107083348)	+	(GCG)n	Simple_repeat	1	72	(0)	4437163
34	6.7	0.0	2.0	chrX	48957716	48957764	(107083131)	+	(CGG)n	Simple_repeat	1	49	(0)	4437164
2458	8.1	0.3	0.0	chrX	49123933	49124241	(106916654)	C	AluSc8	SINE/Alu	(0)	311	2	4437547
53	2.0	0.0	0.0	chrX	49235827	49235876	(106805019)	+	(AC)n	Simple_repeat	1	50	(0)	4437757
16	11.2	0.0	0.0	chrX	54183591	54183619	(101857276)	+	(GGGGC)n	Simple_repeat	1	29	(0)	4445188
18	0.0	0.0	0.0	chrX	72573225	72573244	(83467651)	+	(A)n	Simple_repeat	1	20	(0)	4463580
12	13.6	6.8	4.3	chrX	74924493	74924536	(81116359)	+	(CCATGC)n	Simple_repeat	1	47	(0)	4466272
515	25.9	13.7	0.6	chrX	100654562	100654732	(55386163)	C	MIRb	SINE/MIR	(43)	225	29	4494615
15	19.8	0.0	8.2	chrX	105822730	105822790	(50218105)	+	(TCCTCCT)n	Simple_repeat	1	61	(0)	4502080
850	25.7	7.2	3.9	chrX	111855206	111855560	(44185335)	+	MLT1J1	LTR/ERVL-MaLR	16	408	(36)	4510524
220	29.1	0.0	0.0	chrX	123733342	123733396	(32307499)	C	L2c	LINE/L2	(12)	3375	3321	4527196
1006	28.9	7.0	4.4	chrX	129115172	129115599	(26925296)	+	MLT1J2	LTR/ERVL-MaLR	1	440	(8)	4534253
24	26.6	0.0	3.5	chrX	129957228	129957313	(26083582)	+	(CCCCGC)n	Simple_repeat	1	86	(0)	4535659
22	20.1	4.2	2.7	chrX	129982405	129982476	(26058419)	+	(CTCC)n	Simple_repeat	1	75	(0)	4535724
17	4.9	0.0	0.0	chrX	129982601	129982621	(26058274)	+	(CA)n	Simple_repeat	1	21	(0)	4535725
18	16.8	0.0	0.0	chrX	130268800	130268834	(25772061)	+	GA-rich	Low_complexity	1	35	(0)	4536265
16	0.0	0.0	0.0	chrX	134171570	134171589	(21869306)	+	(AAT)n	Simple_repeat	1	20	(0)	4542200
2518	22.4	3.6	6.9	chrX	134255153	134255758	(21785137)	C	MLT2F	LTR/ERVL	(43)	620	35	4542337
7825	33.8	4.3	3.1	chrX	134255760	134257034	(21783861)	C	ERV3-16A3_I-int	LTR/ERVL	(1128)	4539	3269	4542335
14	23.5	0.0	7.8	chrX	134915322	134915385	(21125510)	+	G-rich	Low_complexity	1	64	(0)	4543615
16	23.4	2.9	4.2	chrX	135985459	135985528	(20055367)	+	G-rich	Low_complexity	1	72	(0)	4545166
14	27.1	0.0	0.0	chrX	139933089	139933132	(16107763)	+	(CCCCG)n	Simple_repeat	1	44	(0)	4551411
299	22.7	1.5	4.3	chrX	150547205	150547273	(5493622)	C	L2b	LINE/L2	(0)	3375	3309	4566064
23	17.7	4.4	2.8	chrX	150693302	150693369	(5347526)	+	(CCCGCG)n	Simple_repeat	1	71	(0)	4566318
25	25.9	2.9	3.7	chrX	150693541	150693644	(5347251)	+	(CGG)n	Simple_repeat	1	107	(0)	4566319
1947	8.9	8.5	0.4	chrX	152958474	152958744	(3082151)	+	AluSx1	SINE/Alu	1	295	(17)	4569658
1121	11.9	0.0	0.6	chrX	153032541	153032699	(3008196)	C	AluJr	SINE/Alu	(17)	295	138	4569752
385	20.1	3.3	0.0	chrX	153763860	153763957	(2276938)	+	MIR	SINE/MIR	40	140	(128)	4570721
217	26.3	1.7	0.0	chrX	153763976	153764032	(2276863)	+	L2b	LINE/L2	3311	3368	(7)	4570722
374	23.6	3.0	5.7	chrY	12431722	12431887	(44795528)	C	MLT1J2	LTR/ERVL-MaLR	(348)	164	7	4590474
2860	9.2	0.5	5.7	chrY	12431955	12432392	(44795023)	C	L1PA10	LINE/L1	(0)	6168	5754	4590475
24700	6.5	1.0	0.3	chrY	14861129	14867059	(42360356)	+	L1PA3	LINE/L1	1	5977	(178)	4593595