3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
19	13.0	0.0	6.2	chr1	959305	959352	(247997070)	+	(CCGCC)n	Simple_repeat	1	48	(0)	1202
2198	11.0	0.7	1.3	chr1	1016061	1016360	(247940062)	C	AluSx1	SINE/Alu	(14)	298	1	1282
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
523	13.2	4.2	0.0	chr1	1541327	1541417	(247415005)	C	FRAM	SINE/Alu	(52)	124	30	1919
393	25.4	5.5	1.4	chr1	1601870	1602009	(247354413)	+	MLT1K	LTR/ERVL-MaLR	37	182	(413)	2039
14	15.6	6.7	2.1	chr1	1778558	1778602	(247177820)	+	G-rich	Low_complexity	1	48	(0)	2331
2406	29.6	8.7	2.1	chr1	2260839	2261815	(246694607)	C	L1MC4	LINE/L1	(1022)	5297	4241	3067
1041	24.5	8.0	8.0	chr1	2262558	2262893	(246693529)	C	L1MC4	LINE/L1	(2031)	4288	3934	3067
16	10.8	0.0	3.1	chr1	2868275	2868306	(246088116)	+	(GGGGA)n	Simple_repeat	1	32	(0)	3543
43	3.2	1.7	10.7	chr1	3181917	3182035	(245774387)	+	(CTTACACATG)n	Simple_repeat	1	121	(0)	3808
14	7.8	3.7	0.0	chr1	3242169	3242195	(245714227)	+	(GGCAG)n	Simple_repeat	1	28	(0)	3850
371	28.3	4.5	0.0	chr1	3478714	3478819	(245477603)	C	L2a	LINE/L2	(25)	3401	3291	4044
14	8.9	7.9	2.4	chr1	3674927	3674964	(245281458)	+	G-rich	Low_complexity	1	41	(0)	4225
14	9.5	8.8	0.0	chr1	3955360	3955393	(245001029)	+	(CGCCTG)n	Simple_repeat	1	37	(0)	4621
567	30.5	8.1	3.5	chr1	5098100	5098415	(243858007)	C	MLT1J	LTR/ERVL-MaLR	(175)	337	6	6242
13	4.3	3.9	3.7	chr1	7336110	7336135	(241620287)	+	(GCCTG)n	Simple_repeat	1	27	(0)	9715
17	14.4	0.0	4.8	chr1	8217064	8217105	(240739317)	+	G-rich	Low_complexity	1	42	(0)	11191
24	14.3	3.6	1.7	chr1	8217345	8217400	(240739022)	+	(GGCCGG)n	Simple_repeat	1	58	(0)	11192
268	32.9	3.2	2.6	chr1	8410404	8410556	(240545866)	+	L3	LINE/CR1	3783	3936	(163)	11587
30	0.0	0.0	0.0	chr1	8817827	8817854	(240138568)	+	(T)n	Simple_repeat	1	28	(0)	12308
12	31.0	0.0	1.9	chr1	8818008	8818060	(240138362)	+	(CCGCCCC)n	Simple_repeat	1	53	(0)	12309
1327	17.9	3.1	5.0	chr1	8881437	8881733	(240074689)	+	AluJo	SINE/Alu	3	293	(19)	12449
2030	11.7	2.9	1.3	chr1	8881737	8882044	(240074378)	+	AluSq2	SINE/Alu	1	313	(0)	12450
857	30.9	11.1	1.2	chr1	10615150	10615789	(238340633)	+	L1ME4b	LINE/L1	1	541	(351)	16140
17	20.0	2.4	2.3	chr1	10941361	10941402	(238015020)	+	(CA)n	Simple_repeat	1	43	(0)	16675
2251	9.9	8.2	5.1	chr1	10989849	10990200	(237966222)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	16786
1972	15.9	0.7	1.0	chr1	10990460	10990761	(237965661)	+	AluJb	SINE/Alu	1	301	(11)	16787
243	22.7	1.5	1.5	chr1	12567212	12567278	(236389144)	C	LTR65	LTR/ERV1	(50)	619	553	19993
17840	7.4	0.7	0.2	chr1	14287381	14291820	(234664602)	C	L1P2	LINE/L1	(1694)	4625	177	22923
9178	11.7	5.8	4.8	chr1	14419528	14421085	(234535337)	C	LTR12C	LTR/ERV1	(1)	1578	3	23134
215	30.2	5.0	5.0	chr1	14572881	14572981	(234383441)	C	L2a	LINE/L2	(22)	3404	3304	23438
20	8.4	5.3	0.0	chr1	14924036	14924044	(234032378)	+	(GGGGGC)n	Simple_repeat	1	40	(0)	24178
15	20.0	0.0	0.0	chr1	14924045	14924073	(234032349)	+	G-rich	Low_complexity	1	29	(0)	24179
18	21.8	2.9	4.2	chr1	14924583	14924651	(234031771)	+	G-rich	Low_complexity	1	71	(0)	24180
1761	15.1	1.4	2.0	chr1	15839549	15839685	(233116737)	+	AluJb	SINE/Alu	5	137	(175)	26179
2298	9.2	0.0	0.3	chr1	15839686	15839977	(233116445)	+	AluSc	SINE/Alu	1	291	(18)	26180
2241	8.8	0.0	2.0	chr1	16098670	16098966	(232857456)	C	AluSx	SINE/Alu	(21)	291	1	26692
19	12.3	4.0	0.0	chr1	16098982	16099019	(232857403)	+	GA-rich	Low_complexity	1	39	(0)	26693
2135	19.3	1.9	0.2	chr1	16099020	16099434	(232856988)	C	MER21B	LTR/ERVL	(430)	438	17	26694
389	23.8	8.4	1.5	chr1	17329921	17330052	(231626370)	C	L1MEd	LINE/L1	(6942)	161	20	29182
2100	21.5	6.0	7.1	chr1	17330328	17330888	(231625534)	C	MLT2B3	LTR/ERVL	(0)	554	1	29192
814	17.4	0.8	0.0	chr1	17431385	17431516	(231524906)	+	FLAM_C	SINE/Alu	1	133	(10)	29374
13	0.0	12.0	0.0	chr1	17431519	17431543	(231524879)	+	(AAAG)n	Simple_repeat	1	28	(0)	29375
2183	9.0	4.0	0.7	chr1	17431816	17432105	(231524317)	+	AluSq2	SINE/Alu	1	300	(13)	29376
445	34.7	13.9	2.7	chr1	18054290	18054949	(230901473)	+	L2b	LINE/L2	2118	2863	(556)	30828
199	30.0	6.7	0.0	chr1	18054968	18055037	(230901385)	+	L2b	LINE/L2	3297	3371	(4)	30828
625	21.8	17.5	1.0	chr1	19029026	19029220	(229927202)	C	MIRb	SINE/MIR	(6)	256	23	32957
12	19.6	0.0	0.0	chr1	19029332	19029360	(229927062)	+	(TGCC)n	Simple_repeat	1	29	(0)	32958
34	5.0	0.0	0.0	chr1	19029621	19029661	(229926761)	+	(CCTGCCG)n	Simple_repeat	1	41	(0)	32959
4620	14.7	1.1	1.7	chr1	19294464	19295631	(229660791)	C	HUERS-P3-int	LTR/ERV1	(5685)	1733	506	33382
281	27.9	10.4	5.7	chr1	20345833	20346079	(228610343)	C	HAL1b	LINE/L1	(13)	2408	2149	35575
1652	17.4	1.8	1.8	chr1	21408527	21408808	(227547614)	+	AluJb	SINE/Alu	1	282	(30)	37865
3911	17.4	5.2	7.1	chr1	21408809	21408995	(227547427)	C	L1MB5	LINE/L1	(1663)	4483	4329	37853
15	33.0	1.5	0.0	chr1	21652001	21652068	(227304354)	+	G-rich	Low_complexity	1	69	(0)	38388
14	20.1	0.0	0.0	chr1	21652095	21652128	(227304294)	+	(CCCCGC)n	Simple_repeat	1	34	(0)	38389
494	29.1	7.6	0.0	chr1	21652260	21652419	(227304003)	+	MIR	SINE/MIR	97	257	(5)	38390
433	24.9	18.5	0.5	chr1	23625542	23625728	(225330694)	C	X7A_LINE	LINE/CR1	(13)	237	32	42918
282	24.4	6.5	1.1	chr1	23625799	23625885	(225330537)	+	MIR	SINE/MIR	101	192	(70)	42919
787	16.3	0.0	5.7	chr1	23673000	23673140	(225283282)	+	FLAM_C	SINE/Alu	3	135	(8)	43064
288	30.6	0.7	9.3	chr1	23673141	23673208	(225283214)	C	L1M5	LINE/L1	(496)	5628	5563	43063
401	26.9	19.3	2.0	chr1	23673238	23673484	(225282938)	C	L2a	LINE/L2	(14)	3412	3113	43065
11	21.7	0.0	2.9	chr1	23980380	23980414	(224976008)	+	(CTCCAC)n	Simple_repeat	1	35	(0)	43830
1297	22.9	11.9	0.5	chr1	24157947	24158368	(224798054)	C	LTR16C	LTR/ERVL	(0)	489	13	44254
523	26.1	0.0	5.5	chr1	24341274	24341419	(224615003)	C	MIRb	SINE/MIR	(68)	200	63	44700
196	29.3	1.2	2.4	chr1	24341511	24341594	(224614828)	+	MIRb	SINE/MIR	118	200	(68)	44701
23	16.5	3.7	0.0	chr1	24502737	24502790	(224453632)	+	(CCCCCG)n	Simple_repeat	1	56	(0)	45043
26	0.0	0.0	0.0	chr1	24503164	24503188	(224453234)	+	(GCGGG)n	Simple_repeat	1	25	(0)	45044
22	0.0	0.0	0.0	chr1	24503214	24503237	(224453185)	+	(A)n	Simple_repeat	1	24	(0)	45045
2202	14.1	0.0	0.0	chr1	25734117	25734428	(223221994)	C	AluSz6	SINE/Alu	(0)	312	1	47733
231	33.3	7.4	9.0	chr1	25734429	25734499	(223221923)	+	MIRc	SINE/MIR	189	266	(2)	47731
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
1364	10.8	1.6	0.0	chr1	28649101	28649286	(220307136)	C	AluSc	SINE/Alu	(120)	189	1	54783
1355	12.8	0.0	0.0	chr1	29101517	29101696	(219854726)	+	AluSx3	SINE/Alu	131	310	(1)	55913
1161	13.1	1.2	0.0	chr1	29101756	29101915	(219854507)	+	AluJo	SINE/Alu	137	298	(14)	55914
1822	24.1	12.6	1.7	chr1	29793094	29793740	(219162682)	+	LTR41B	LTR/ERVL	17	744	(14)	57302
534	22.9	4.6	9.0	chr1	30034215	30034402	(218922020)	+	MIR	SINE/MIR	57	235	(27)	57717
12	19.9	2.3	4.4	chr1	31760579	31760622	(217195800)	+	G-rich	Low_complexity	1	45	(0)	61269
14	20.0	3.0	7.3	chr1	31760665	31760730	(217195692)	+	(CGCC)n	Simple_repeat	1	68	(0)	61270
14	18.6	2.7	0.0	chr1	31761018	31761054	(217195368)	+	G-rich	Low_complexity	1	38	(0)	61271
183	28.6	4.5	0.0	chr1	31855115	31855177	(217101245)	C	MIR	SINE/MIR	(117)	145	80	61475
3656	22.9	11.8	5.4	chr1	31857360	31858043	(217098379)	C	L2a	LINE/L2	(985)	2434	1681	61478
334	26.3	1.0	2.0	chr1	31858045	31858145	(217098277)	C	L2a	LINE/L2	(1990)	1429	1330	61478
29	2.9	2.8	0.0	chr1	32500418	32500453	(216455969)	+	(GGGCGAGA)n	Simple_repeat	1	37	(0)	62987
15	0.0	0.0	0.0	chr1	32500491	32500509	(216455913)	+	(GGC)n	Simple_repeat	1	19	(0)	62988
14	15.6	2.1	6.1	chr1	32500510	32500535	(216455887)	+	G-rich	Low_complexity	4	49	(0)	62989
181	37.8	3.1	4.2	chr1	32555688	32555880	(216400542)	+	L2	LINE/L2	2322	2512	(907)	63153
14	16.4	2.9	0.0	chr1	32555885	32555918	(216400504)	+	A-rich	Low_complexity	1	35	(0)	63154
1228	16.8	6.8	11.0	chr1	32555919	32556061	(216400361)	C	AluJb	SINE/Alu	(8)	294	149	63155
2295	10.8	1.3	0.0	chr1	32556062	32556367	(216400055)	C	AluSg	SINE/Alu	(0)	310	1	63156
2301	10.1	0.7	0.0	chr1	32753203	32753509	(216202913)	+	AluSx	SINE/Alu	1	309	(3)	63656
432	19.0	7.4	0.0	chr1	32753512	32753611	(216202811)	+	MIRb	SINE/MIR	161	268	(0)	63657
279	27.6	12.8	1.5	chr1	32816718	32816919	(216139503)	+	L2c	LINE/L2	3107	3344	(31)	63793
411	23.5	8.0	10.1	chr1	33110781	33110998	(215845424)	C	LTR41B	LTR/ERVL	(18)	740	528	64463
434	30.5	1.7	0.0	chr1	33111154	33111271	(215845151)	+	MIR3	SINE/MIR	68	187	(21)	64464
684	30.9	12.1	2.5	chr1	33251270	33251800	(215704622)	+	L2b	LINE/L2	2551	3161	(214)	64781
679	28.4	4.2	10.2	chr1	33251930	33252070	(215704352)	+	MLT1I	LTR/ERVL-MaLR	63	190	(221)	64782
2158	7.8	0.7	1.0	chr1	33252071	33252354	(215704068)	+	AluSp	SINE/Alu	1	285	(28)	64783
612	28.4	9.6	5.0	chr1	33472029	33472280	(215484142)	C	MIR	SINE/MIR	(0)	262	6	65174
8990	5.0	2.0	20.0	chr1	34081394	34083087	(214873335)	+	SVA_B	Retroposon/SVA	1	1383	(0)	66187
1906	6.4	0.0	0.0	chr1	35057835	35058085	(213898337)	C	L1P1	LINE/L1	(2924)	3222	2972	67935
2075	13.9	6.9	0.0	chr1	35058081	35058417	(213898005)	C	L1P1	LINE/L1	(5793)	362	1	67936
652	27.8	9.7	5.9	chr1	36754320	36754693	(212201729)	C	MLT1K	LTR/ERVL-MaLR	(94)	501	112	71507
413	32.1	10.3	7.4	chr1	36907242	36907793	(212048629)	+	LTR85c	LTR/Gypsy?	254	823	(0)	71767
1081	26.6	3.4	9.3	chr1	36907855	36908264	(212048158)	+	LTR16A1	LTR/ERVL	72	456	(0)	71768
12	10.2	0.0	10.3	chr1	37514263	37514301	(211442121)	+	(TCCCCC)n	Simple_repeat	1	39	(0)	72892
16	20.8	2.6	7.6	chr1	37514389	37514465	(211441957)	+	(CCGCTC)n	Simple_repeat	1	79	(0)	72893
12	16.0	0.0	3.3	chr1	37514529	37514558	(211441864)	+	(CGCCG)n	Simple_repeat	1	30	(0)	72894
230	28.7	17.0	0.8	chr1	37724763	37724885	(211231537)	+	MIR	SINE/MIR	17	163	(99)	73304
245	32.9	9.1	2.9	chr1	37724929	37725103	(211231319)	C	L2	LINE/L2	(1685)	1734	1548	73303
16	18.1	0.0	8.5	chr1	38005703	38005761	(210950661)	+	(CCCCT)n	Simple_repeat	1	59	(0)	73899
673	27.0	2.5	10.9	chr1	38824226	38824397	(210132025)	C	MIRb	SINE/MIR	(91)	177	26	75391
269	26.4	20.5	5.9	chr1	38824461	38824629	(210131793)	+	MIRc	SINE/MIR	58	257	(11)	75394
208	36.0	2.6	3.2	chr1	38824656	38824810	(210131612)	+	MamRTE1	LINE/RTE-BovB	3496	3649	(163)	75395
3230	15.0	4.4	10.0	chr1	38830231	38830650	(210125772)	+	MER39	LTR/ERV1	178	597	(110)	75403
2373	9.4	0.3	0.7	chr1	38830651	38830958	(210125464)	C	AluSq2	SINE/Alu	(6)	307	1	75405
24	22.0	5.6	3.5	chr1	39576441	39576547	(209379875)	+	G-rich	Low_complexity	1	113	(0)	76949
15	25.2	4.8	1.5	chr1	39576520	39576582	(209379840)	+	(GGAC)n	Simple_repeat	1	66	(0)	76950
17	27.4	1.3	4.0	chr1	39576661	39576736	(209379686)	+	(TTTTTC)n	Simple_repeat	1	74	(0)	76951
12	17.6	5.0	2.4	chr1	39576756	39576795	(209379627)	+	(GCG)n	Simple_repeat	1	42	(0)	76952
15	17.0	9.8	1.5	chr1	39576889	39576949	(209379473)	+	(CGGCG)n	Simple_repeat	1	67	(0)	76953
440	27.4	6.3	6.7	chr1	39577002	39577120	(209379302)	C	MER20B	DNA/hAT-Charlie	(23)	760	649	76954
2409	6.0	0.3	1.7	chr1	39577121	39577418	(209379004)	+	AluSc8	SINE/Alu	1	294	(17)	76955
13	11.6	0.0	6.2	chr1	39639687	39639718	(209316704)	+	(CCCGG)n	Simple_repeat	1	32	(0)	77114
2148	15.0	1.1	0.0	chr1	40117376	40117722	(208838700)	+	L1PA16	LINE/L1	5463	5813	(370)	78125
421	26.6	8.9	6.5	chr1	40117727	40117852	(208838570)	+	L2a	LINE/L2	2826	2879	(540)	78133
2503	8.9	0.0	0.0	chr1	40117853	40118145	(208838277)	+	AluSx1	SINE/Alu	9	301	(11)	78134
16	11.4	5.9	8.3	chr1	40423500	40423567	(208532855)	+	(GCATCAGA)n	Simple_repeat	1	72	(0)	78768
323	32.3	1.6	0.0	chr1	40423584	40423710	(208532712)	C	MIR1_Amn	SINE/MIR	(88)	142	14	78769
468	29.6	4.3	2.5	chr1	40476821	40477024	(208479398)	+	L2a	LINE/L2	3201	3408	(18)	78878
37	2.6	0.0	0.0	chr1	40477027	40477065	(208479357)	+	(TGAA)n	Simple_repeat	1	39	(0)	78889
2414	10.0	0.0	1.3	chr1	41332755	41333065	(207623357)	+	AluSx	SINE/Alu	1	307	(5)	80598
2055	16.5	1.8	8.8	chr1	41333066	41333096	(207623326)	C	MLT1B	LTR/ERVL-MaLR	(364)	26	2	80599
428	28.9	7.9	5.7	chr1	41333101	41333309	(207623113)	+	L2c	LINE/L2	3023	3236	(151)	80600
363	27.7	6.0	6.7	chr1	41333336	41333624	(207622798)	+	MLT1K	LTR/ERVL-MaLR	5	354	(241)	80601
13	24.7	0.0	4.2	chr1	41419591	41419638	(207536784)	+	(TTCCC)n	Simple_repeat	1	48	(0)	80774
28866	15.5	8.4	10.3	chr1	42510672	42511836	(206444586)	C	HUERS-P3b-int	LTR/ERV1	(5556)	1862	709	82633
346	22.0	14.8	4.5	chr1	44213112	44213244	(204743178)	C	MIRb	SINE/MIR	(34)	234	86	85684
292	27.4	0.0	0.0	chr1	44708407	44708468	(204247954)	C	L2a	LINE/L2	(5)	3421	3360	86533
182	34.4	8.4	5.1	chr1	44708492	44708629	(204247793)	C	L2	LINE/L2	(2800)	619	477	86534
351	27.3	16.4	3.1	chr1	44708743	44708969	(204247453)	+	L2	LINE/L2	1546	1808	(1611)	86535
235	11.6	4.4	0.0	chr1	44708980	44709022	(204247400)	+	L1MC5a	LINE/L1	2329	2373	(404)	86536
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
12	19.3	0.0	5.1	chr1	44784486	44784524	(204171898)	+	(GCGG)n	Simple_repeat	1	39	(0)	86706
321	33.7	6.9	2.4	chr1	45803063	45803229	(203153193)	+	MIRb	SINE/MIR	23	197	(71)	88818
198	27.9	11.3	0.0	chr1	45803323	45803408	(203153014)	+	L2c	LINE/L2	3291	3387	(0)	88809
2792	2.9	0.0	0.0	chr1	46383449	46383754	(202572668)	C	AluYh3	SINE/Alu	(5)	306	1	89963
1652	15.9	1.6	0.8	chr1	46393204	46393503	(202562919)	C	HERVIP10FH-int	LTR/ERV1	(7306)	297	1	89967
2985	8.9	9.6	1.9	chr1	46393504	46393974	(202562448)	C	LTR10F	LTR/ERV1	(0)	511	1	89967
2493	9.8	2.4	8.0	chr1	47003947	47004346	(201952076)	+	MER51B	LTR/ERV1	1	377	(0)	90836
11596	14.2	3.2	1.1	chr1	47004356	47006444	(201949978)	+	MER51-int	LTR/ERV1	10	2144	(5672)	90837
16	16.3	0.0	2.8	chr1	47438097	47438132	(201518290)	+	(GCG)n	Simple_repeat	1	36	(0)	91599
18	29.7	0.0	2.7	chr1	47593724	47593796	(201362626)	+	(CCCCCA)n	Simple_repeat	1	73	(0)	91934
15	27.1	1.5	4.4	chr1	47996718	47996784	(200959638)	+	(CGG)n	Simple_repeat	1	68	(0)	92700
226	20.0	0.0	0.0	chr1	53220412	53220456	(195735966)	+	L1M1	LINE/L1	1015	1059	(6506)	102673
16	10.8	0.0	3.1	chr1	53220667	53220698	(195735724)	+	(GGCCGG)n	Simple_repeat	1	32	(0)	102674
221	20.3	6.3	1.7	chr1	54127394	54127453	(194828969)	+	UCON71_Crp	Unknown	185	247	(30)	104470
273	30.2	1.6	0.3	chr1	54127627	54127784	(194828638)	+	L2c	LINE/L2	2929	3091	(284)	104471
301	28.1	7.9	9.2	chr1	54199443	54199595	(194756827)	+	L2a	LINE/L2	3266	3416	(10)	104651
315	29.2	5.0	2.5	chr1	54199791	54199971	(194756451)	C	MIRb	SINE/MIR	(77)	191	13	104652
208	34.1	2.3	8.0	chr1	54287943	54288079	(194668343)	+	L3	LINE/CR1	3744	3872	(227)	104805
2198	11.3	1.3	0.0	chr1	54513896	54514196	(194442226)	+	AluSz6	SINE/Alu	8	312	(0)	105258
1029	28.2	5.2	2.8	chr1	54514304	54514448	(194441974)	+	MLT1K	LTR/ERVL-MaLR	149	292	(303)	105259
2459	7.4	0.0	0.0	chr1	54514449	54514747	(194441675)	+	AluSg4	SINE/Alu	1	299	(11)	105260
1680	15.5	0.7	4.6	chr1	54828326	54828629	(194127793)	C	AluJb	SINE/Alu	(20)	292	1	105987
1954	16.9	2.7	0.0	chr1	55935975	55936329	(193020093)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	107903
633	29.8	1.2	11.4	chr1	55936433	55936626	(193019796)	+	MIR	SINE/MIR	1	182	(80)	107904
530	32.4	3.8	0.6	chr1	55990447	55990626	(192965796)	C	LTR16C	LTR/ERVL	(1)	488	303	107995
15	13.6	0.0	5.6	chr1	55990978	55991013	(192965409)	+	(ACA)n	Simple_repeat	1	36	(0)	107996
33	7.0	0.0	0.0	chr1	56579466	56579510	(192376912)	+	(CCTCCTGCT)n	Simple_repeat	1	45	(0)	109122
15	15.3	0.0	0.0	chr1	56579513	56579541	(192376881)	+	(TGC)n	Simple_repeat	1	29	(0)	109123
19	16.7	3.4	4.9	chr1	56645326	56645384	(192311038)	+	(GGC)n	Simple_repeat	1	61	(0)	109245
18	26.9	1.4	2.8	chr1	56645567	56645637	(192310785)	+	G-rich	Low_complexity	1	72	(0)	109246
363	31.5	8.6	3.4	chr1	56809499	56809754	(192146668)	+	L2c	LINE/L2	3029	3299	(88)	109546
305	35.4	1.4	0.7	chr1	56809755	56809899	(192146523)	+	MIR	SINE/MIR	3	148	(114)	109547
27675	4.4	0.1	0.1	chr1	58958129	58964283	(189992139)	+	L1PA5	LINE/L1	1	6154	(0)	113899
226	30.0	0.0	0.0	chr1	59016348	59016407	(189940015)	+	L2a	LINE/L2	3365	3424	(2)	114008
43	2.5	0.0	0.0	chr1	59016636	59016676	(189939746)	+	(CT)n	Simple_repeat	1	41	(0)	114009
1255	13.1	0.0	0.0	chr1	59016707	59016882	(189939540)	+	AluSx	SINE/Alu	137	312	(0)	114010
695	23.4	6.4	3.9	chr1	59421107	59421439	(189534983)	+	L1MC5	LINE/L1	8810	9151	(153)	114838
1999	16.8	3.0	0.6	chr1	60994311	60994663	(187961759)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	4	117474
16	19.3	0.0	8.1	chr1	61742354	61742415	(187214007)	+	(CCCGCCC)n	Simple_repeat	1	62	(0)	118746
23852	6.6	1.3	0.1	chr1	61943141	61949224	(187007198)	+	L1PA5	LINE/L1	5	6153	(1)	119164
2144	15.8	1.0	0.6	chr1	62677849	62678159	(186278263)	+	AluJr4	SINE/Alu	1	312	(0)	120617
2307	24.4	12.3	7.3	chr1	62678160	62678855	(186277567)	+	L1ME3B	LINE/L1	4090	4851	(1295)	120616
8440	11.9	17.2	1.3	chr1	62761340	62762661	(186193761)	+	LTR12C	LTR/ERV1	3	1579	(0)	120771
2291	9.7	2.6	1.0	chr1	63462972	63463271	(185493151)	+	AluSq2	SINE/Alu	1	305	(8)	122099
12	17.6	4.0	5.8	chr1	63594013	63594062	(185362360)	+	(CTCTCC)n	Simple_repeat	1	52	(0)	122314
15	5.6	0.0	0.0	chr1	63775171	63775189	(185181233)	+	(GC)n	Simple_repeat	1	19	(0)	122682
266	18.8	0.9	0.0	chr1	64745611	64745674	(184210748)	C	MIR1_Amn	SINE/MIR	(89)	141	70	124433
21	18.1	0.0	8.2	chr1	64966524	64966596	(183989826)	+	(CCGCC)n	Simple_repeat	1	73	(0)	124796
309	28.2	9.4	4.5	chr1	65002361	65002589	(183953833)	+	MIRb	SINE/MIR	8	251	(17)	124873
13	9.8	0.0	0.0	chr1	65002691	65002712	(183953710)	+	(CGG)n	Simple_repeat	1	22	(0)	124874
19	0.0	0.0	0.0	chr1	65003014	65003034	(183953388)	+	(T)n	Simple_repeat	1	21	(0)	124875
344	32.3	0.0	0.0	chr1	65178331	65178426	(183777996)	+	MER91A	DNA/hAT-Tip100	56	151	(45)	125274
23	23.6	1.1	5.6	chr1	65254442	65254529	(183701893)	+	(GCG)n	Simple_repeat	1	89	(0)	125433
263	25.9	14.0	9.1	chr1	65255156	65255628	(183700794)	C	L2c	LINE/L2	(0)	3387	2818	125434
28	13.7	0.0	4.8	chr1	65310202	65310263	(183646159)	+	G-rich	Low_complexity	1	62	(0)	125554
3773	19.5	7.6	2.1	chr1	65758954	65759764	(183196658)	+	MER21B	LTR/ERVL	1	859	(9)	126237
4075	22.4	7.2	5.3	chr1	65759772	65761040	(183195382)	+	LTR37-int	LTR/ERV1	502	1811	(2249)	126234
4761	14.7	4.6	0.4	chr1	66158193	66159239	(182797183)	+	L1MA6	LINE/L1	5121	6300	(0)	126808
1998	11.9	3.0	2.7	chr1	66159246	66159540	(182796882)	C	AluSx3	SINE/Alu	(15)	296	1	126809
16	20.4	6.8	1.6	chr1	66924885	66924943	(182031479)	+	GA-rich	Low_complexity	1	63	(0)	127976
21	22.9	0.0	0.0	chr1	66925047	66925094	(182031328)	+	(GGC)n	Simple_repeat	1	48	(0)	127977
291	22.0	4.4	0.0	chr1	66925695	66925791	(182030631)	+	MIR3	SINE/MIR	30	136	(94)	127978
13	12.2	8.3	0.0	chr1	66930267	66930302	(182026120)	+	(GGCAGC)n	Simple_repeat	1	39	(0)	127982
18	22.1	2.1	0.0	chr1	67833185	67833232	(181123190)	+	(CTTC)n	Simple_repeat	1	49	(0)	129656
16	24.3	3.3	1.6	chr1	67833273	67833332	(181123090)	+	(CGCCG)n	Simple_repeat	1	62	(0)	129657
11	13.4	5.7	2.7	chr1	67833344	67833378	(181123044)	+	(CCGCCG)n	Simple_repeat	1	37	(0)	129658
19	6.8	3.2	0.0	chr1	67833416	67833446	(181122976)	+	(CCT)n	Simple_repeat	1	32	(0)	129659
13	13.1	2.7	5.3	chr1	68232359	68232395	(180724027)	+	(CTCC)n	Simple_repeat	1	38	(0)	130267
18	34.0	0.0	0.0	chr1	68232582	68232644	(180723778)	+	(CCTT)n	Simple_repeat	1	63	(0)	130268
24105	7.3	0.5	0.1	chr1	69389450	69395594	(179560828)	C	L1PA5	LINE/L1	(0)	6154	3	131956
22	11.7	1.9	5.7	chr1	70221460	70221511	(178734911)	+	(GCG)n	Simple_repeat	1	53	(0)	133042
20	22.2	0.0	0.0	chr1	70221683	70221729	(178734693)	+	(GCG)n	Simple_repeat	1	47	(0)	133043
2628	18.8	7.6	2.0	chr1	70628381	70629427	(178326995)	+	HERVL18-int	LTR/ERVL	9	1810	(4237)	133738
26823	4.2	0.1	0.4	chr1	75476262	75482430	(173473992)	+	L1PA3	LINE/L1	2	6152	(3)	139972
287	25.4	0.0	0.0	chr1	75582809	75582871	(173373551)	C	HAL1M8	LINE/L1	(30)	2961	2899	140139
510	29.9	7.0	8.2	chr1	75582881	75583197	(173373225)	C	LTR78B	LTR/ERV1	(12)	1284	972	140140
257	29.1	3.6	2.5	chr1	75583283	75583363	(173373059)	C	LTR78B	LTR/ERV1	(455)	841	760	140140
15	30.4	1.4	2.7	chr1	75724615	75724686	(173231736)	+	(CCGCC)n	Simple_repeat	1	73	(0)	140345
27	27.3	2.6	3.3	chr1	76074604	76074720	(172881702)	+	G-rich	Low_complexity	1	120	(0)	140897
2417	7.8	0.0	2.3	chr1	76123090	76123396	(172833026)	+	AluSx1	SINE/Alu	1	300	(12)	140979
426	31.5	8.4	2.6	chr1	76726791	76726979	(172229443)	+	MIR	SINE/MIR	61	261	(1)	141855
746	23.5	14.2	4.6	chr1	76727097	76727399	(172229023)	+	MLT1K	LTR/ERVL-MaLR	144	480	(115)	141856
35	2.8	0.0	0.0	chr1	76868592	76868628	(172087794)	+	(GCA)n	Simple_repeat	1	37	(0)	142078
22062	9.4	1.1	3.0	chr1	78203109	78209571	(170746851)	+	L1PA7	LINE/L1	6	6462	(7)	144259
21135	9.4	1.7	0.8	chr1	78607700	78613730	(170342692)	+	L1PA6	LINE/L1	10	6154	(0)	144814
785	24.9	5.3	4.5	chr1	78690159	78690402	(170266020)	+	MLT1A	LTR/ERVL-MaLR	1	246	(128)	144903
607	28.1	12.1	10.4	chr1	78690507	78691368	(170265054)	C	L2a	LINE/L2	(270)	3156	2243	144904
27114	3.1	0.1	0.0	chr1	80132549	80138577	(168817845)	C	L1PA3	LINE/L1	(3)	6152	124	146774
332	35.6	8.6	1.3	chr1	83338585	83338809	(165617613)	C	L2c	LINE/L2	(937)	2482	2240	151034
20	16.7	0.0	0.0	chr1	83338951	83338984	(165617438)	+	(T)n	Simple_repeat	1	34	(0)	151035
280	0.0	0.0	0.0	chr1	83338985	83339018	(165617404)	C	L1M2	LINE/L1	(489)	5802	5769	151036
37	15.9	0.0	0.0	chr1	84078068	84078133	(164878289)	+	(CCG)n	Simple_repeat	1	66	(0)	152037
210	16.3	0.0	8.5	chr1	84366108	84366154	(164590268)	C	MIRc	SINE/MIR	(194)	74	32	152407
18	7.5	0.0	0.0	chr1	84893245	84893272	(164063150)	+	(GCCCC)n	Simple_repeat	1	28	(0)	153270
21	29.4	0.0	0.0	chr1	85201169	85201234	(163755188)	+	(TCG)n	Simple_repeat	1	66	(0)	153784
59	19.2	0.8	0.0	chr1	85556056	85556174	(163400248)	+	(CCT)n	Simple_repeat	1	120	(0)	154350
10394	13.1	1.7	0.5	chr1	86026688	86028296	(162928126)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	155062
265	26.5	10.1	0.0	chr1	86379588	86379685	(162576737)	+	CR1_Mam	LINE/CR1	2026	2134	(70)	155519
251	26.1	12.0	0.0	chr1	86379686	86379773	(162576649)	+	X7C_LINE	LINE/CR1	3	102	(134)	155520
15677	7.4	1.8	0.3	chr1	86610688	86614560	(162341862)	C	L1P2	LINE/L1	(2224)	3922	9	155851
23164	4.5	0.0	0.2	chr1	86625552	86630498	(162325924)	C	L1P1	LINE/L1	(1210)	4936	1	155868
24359	7.4	0.2	0.2	chr1	86657443	86663611	(162292811)	+	L1PA6	LINE/L1	174	6327	(0)	155911
6524	8.9	6.6	3.4	chr1	86963156	86964665	(161991757)	C	SVA_C	Retroposon/SVA	(0)	1384	13	156403
10841	11.2	1.5	2.5	chr1	86981299	86982518	(161973904)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	407	156433
297	20.2	8.1	0.0	chr1	87421102	87421180	(161535242)	+	MER5A	DNA/hAT-Charlie	43	128	(61)	157034
307	27.0	9.2	0.0	chr1	87421424	87421512	(161534910)	C	MER63A	DNA/hAT-Blackjack	(105)	105	8	157035
15	24.4	0.0	0.0	chr1	88891121	88891159	(160065263)	+	G-rich	Low_complexity	1	39	(0)	159173
22719	10.8	2.3	1.6	chr1	89071604	89077988	(159878434)	+	L1PA8	LINE/L1	6	6467	(20)	159463
767	15.1	1.6	0.0	chr1	91130831	91130949	(157825473)	+	AluJr	SINE/Alu	12	132	(180)	162304
13094	9.4	2.3	1.6	chr1	91130960	91132973	(157823449)	+	L1P3	LINE/L1	1	2061	(4438)	162305
23336	9.6	3.8	2.1	chr1	91186525	91189083	(157767339)	C	L1PA7	LINE/L1	(3824)	2637	1	162400
18	19.5	2.3	2.3	chr1	91189140	91189182	(157767240)	+	(AC)n	Simple_repeat	1	44	(0)	162402
26057	5.0	0.3	0.2	chr1	91296807	91302949	(157653473)	+	L1PA4	LINE/L1	2	6154	(1)	162548
23603	10.9	2.2	4.0	chr1	91422370	91428894	(157527528)	C	L1PA8	LINE/L1	(6)	6481	6	162697
2267	12.2	0.3	0.0	chr1	91428933	91429234	(157527188)	+	AluSx	SINE/Alu	9	311	(1)	162698
328	30.8	4.4	3.0	chr1	91747050	91747183	(157209239)	C	MIRb	SINE/MIR	(114)	154	19	163185
2940	12.0	6.4	3.8	chr1	91924418	91924920	(157031502)	C	MER21A	LTR/ERVL	(0)	931	415	163483
390	24.4	5.8	4.4	chr1	91924922	91925058	(157031364)	C	MLT1C	LTR/ERVL-MaLR	(219)	248	110	163505
1807	16.7	0.0	0.4	chr1	91925085	91925359	(157031063)	C	AluSx4	SINE/Alu	(28)	282	9	163506
1869	17.6	1.6	0.7	chr1	92014848	92015153	(156941269)	+	AluJb	SINE/Alu	2	310	(2)	163717
1099	16.5	0.0	0.6	chr1	92015157	92015326	(156941096)	+	AluJb	SINE/Alu	141	309	(3)	163718
6273	8.7	2.6	1.6	chr1	92025356	92026908	(156929514)	C	SVA_B	Retroposon/SVA	(1)	1382	23	163740
679	14.1	6.4	7.0	chr1	92423772	92423913	(156532509)	+	7SLRNA	srpRNA	165	305	(15)	164448
252	29.3	10.2	1.7	chr1	92424090	92424220	(156532202)	C	L2c	LINE/L2	(15)	3360	3241	164449
25320	6.6	0.8	0.2	chr1	92430765	92436888	(156519534)	C	L1PA5	LINE/L1	(0)	6154	9	164466
23529	8.3	1.1	1.5	chr1	92715489	92721678	(156234744)	+	L1PA6	LINE/L1	3	6143	(11)	164927
13	9.7	0.0	0.0	chr1	93180359	93180380	(155776042)	+	(GGC)n	Simple_repeat	1	22	(0)	165855
10736	9.5	5.0	0.3	chr1	93242516	93244021	(155712401)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	165978
12	27.8	3.9	0.0	chr1	93448023	93448074	(155508348)	+	(CCCCCTC)n	Simple_repeat	1	54	(0)	166315
542	33.0	10.2	2.5	chr1	93771061	93771296	(155185126)	C	MIR	SINE/MIR	(0)	262	7	166816
15	12.2	0.0	0.0	chr1	93909201	93909227	(155047195)	+	(GCGG)n	Simple_repeat	1	27	(0)	167023
18	30.7	1.3	2.5	chr1	93909334	93909412	(155047010)	+	(CGG)n	Simple_repeat	1	80	(0)	167024
26116	5.6	0.4	0.2	chr1	94134120	94140257	(154816165)	+	L1PA4	LINE/L1	3	6152	(3)	167344
3916	7.3	0.8	0.0	chr1	94389252	94389759	(154566663)	+	MER9a3	LTR/ERVK	1	512	(0)	167708
2326	34.5	5.8	4.5	chr1	94389823	94390290	(154566132)	C	ERVL-E-int	LTR/ERVL	(2931)	2736	2274	167709
21433	9.9	3.5	0.9	chr1	95737200	95743135	(153213287)	C	L1PB1	LINE/L1	(1)	6866	625	169756
1052	13.8	5.0	0.5	chr1	95743128	95743316	(153213106)	C	L1PB1	LINE/L1	(6663)	200	3	169756
27276	3.7	0.1	0.3	chr1	96243977	96247116	(152709306)	C	L1PA3	LINE/L1	(2880)	3266	133	170393
342	21.0	4.7	1.2	chr1	96247154	96247235	(152709187)	+	MLT1I	LTR/ERVL-MaLR	318	402	(9)	170392
1562	17.4	3.8	0.7	chr1	97357552	97357835	(151598587)	C	L1PB4	LINE/L1	(15)	6141	5849	171927
23942	7.5	0.8	0.2	chr1	97357838	97363959	(151592463)	+	L1PA6	LINE/L1	183	6320	(7)	171928
13	7.4	3.1	6.1	chr1	98661688	98661719	(150294703)	+	(GGC)n	Simple_repeat	1	33	(0)	173753
26651	4.2	0.2	0.1	chr1	99399825	99405973	(149550449)	C	L1PA3	LINE/L1	(3)	6152	1	174790
1624	30.7	7.8	1.6	chr1	99827837	99828392	(149128030)	C	LTR105_Mam	LTR/ERVL	(0)	600	8	175443
2153	13.5	0.3	1.0	chr1	100350912	100351222	(148605200)	+	AluSz6	SINE/Alu	1	309	(3)	176445
322	32.6	0.0	0.0	chr1	100351338	100351432	(148604990)	+	MamSINE1	SINE/tRNA-RTE	195	289	(1)	176446
10122	11.2	8.2	0.5	chr1	100889425	100890927	(148065495)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	177175
8989	15.8	5.7	0.5	chr1	102295183	102296726	(146659696)	+	THE1D-int	LTR/ERVL-MaLR	3	1630	(1)	179123
11071	9.6	2.5	1.7	chr1	102871960	102873283	(146083139)	C	THE1B-int	LTR/ERVL-MaLR	(222)	1358	6	179858
26840	3.9	0.2	0.1	chr1	104935149	104941180	(144015242)	C	L1PA3	LINE/L1	(0)	6155	124	182242
11296	20.7	4.9	1.0	chr1	105300076	105302341	(143654081)	C	L1M1	LINE/L1	(5003)	2562	98	182688
38	0.0	0.0	0.0	chr1	105302342	105302374	(143654048)	+	(TG)n	Simple_repeat	1	33	(0)	182690
11296	20.8	5.0	0.9	chr1	105302375	105302462	(143653960)	C	L1M1	LINE/L1	(7468)	97	16	182688
651	23.8	4.2	3.1	chr1	105302444	105302634	(143653788)	C	L1M1	LINE/L1	(7360)	205	13	182688
20852	11.7	0.9	2.1	chr1	108518413	108521195	(140435227)	C	L1PA8	LINE/L1	(3669)	2792	8	186858
2169	9.9	0.0	0.3	chr1	109241040	109241322	(139715100)	+	AluSx	SINE/Alu	22	303	(9)	188289
1276	9.5	0.0	0.0	chr1	112743537	112743704	(136212718)	+	AluSx1	SINE/Alu	136	303	(9)	193678
597	33.3	16.7	1.5	chr1	113002050	113002661	(135953761)	+	L3	LINE/CR1	2982	3705	(394)	194243
501	20.0	11.9	0.9	chr1	113002720	113002824	(135953598)	+	AluJo	SINE/Alu	1	118	(194)	194244
2363	4.8	0.0	0.0	chr1	113002866	113003135	(135953287)	C	AluSg7	SINE/Alu	(14)	295	26	194245
1787	17.6	0.0	2.9	chr1	113556553	113556865	(135399557)	C	AluJo	SINE/Alu	(8)	304	1	195192
1768	23.0	6.3	6.2	chr1	113556866	113557044	(135399378)	+	L1MC	LINE/L1	3341	3518	(2628)	195190
9939	16.7	3.5	3.0	chr1	113557052	113559567	(135396855)	+	L1PA11	LINE/L1	633	3922	(3659)	195193
11448	9.1	1.6	0.6	chr1	113717923	113718988	(135237434)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	499	195393
13	25.3	1.8	3.6	chr1	113812295	113812349	(135144073)	+	(GCCC)n	Simple_repeat	1	56	(0)	195565
503	20.3	6.8	0.0	chr1	114479654	114479791	(134476631)	+	L1M4a1	LINE/L1	2119	2266	(313)	196652
5279	3.9	1.4	1.0	chr1	114479793	114480495	(134475927)	+	SVA_C	Retroposon/SVA	678	1383	(1)	196654
17	18.1	0.0	0.0	chr1	114510751	114510788	(134445634)	+	(GGAGCC)n	Simple_repeat	1	38	(0)	196724
13	23.4	6.0	0.0	chr1	114511170	114511219	(134445203)	+	(GAGC)n	Simple_repeat	1	53	(0)	196725
18	14.9	2.6	2.5	chr1	114511211	114511249	(134445173)	+	(GC)n	Simple_repeat	1	40	(0)	196726
16	25.7	1.8	1.7	chr1	114670043	114670115	(134286307)	+	(CCCCAG)n	Simple_repeat	1	73	(0)	197085
226	24.5	15.0	7.0	chr1	115086140	115086297	(133870125)	C	MIR	SINE/MIR	(0)	262	90	197668
188	34.1	3.9	2.4	chr1	115086385	115086510	(133869912)	+	L2c	LINE/L2	3039	3166	(221)	197669
14859	9.7	2.3	2.0	chr1	115583718	115584980	(133371442)	C	L1PA6	LINE/L1	(4914)	1270	5	198397
24230	10.3	1.2	0.2	chr1	115633481	115639929	(133316493)	C	L1PA7	LINE/L1	(3)	6466	8	198474
2200	11.3	1.0	0.7	chr1	115639946	115640247	(133316175)	C	AluSx1	SINE/Alu	(9)	303	1	198475
14	23.5	4.3	4.1	chr1	115641866	115641935	(133314487)	+	(GGCTG)n	Simple_repeat	1	73	(0)	198480
15	26.0	3.3	1.6	chr1	115641931	115641991	(133314431)	+	(GGCAGC)n	Simple_repeat	1	63	(0)	198481
13	4.8	4.5	0.0	chr1	115641973	115641994	(133314428)	+	(GCG)n	Simple_repeat	1	23	(0)	198482
13	22.3	4.3	5.5	chr1	115642016	115642085	(133314337)	+	(CGCGGAC)n	Simple_repeat	1	73	(0)	198483
1550	25.1	7.8	1.8	chr1	116534682	116535249	(132421173)	C	Charlie25	DNA/hAT-Charlie	(1739)	785	181	199856
19	16.0	8.0	3.7	chr1	116741856	116741930	(132214492)	+	(GCCTGC)n	Simple_repeat	1	81	(0)	200196
1707	16.8	1.7	4.3	chr1	116963775	116964078	(131992344)	C	AluJr	SINE/Alu	(15)	297	2	200558
881	30.3	8.9	3.6	chr1	116964106	116964519	(131991903)	+	L2a	LINE/L2	1816	2253	(1166)	200554
275	24.5	12.7	0.9	chr1	116986056	116986166	(131970256)	+	MIR	SINE/MIR	96	221	(41)	200581
941	31.0	6.8	3.8	chr1	117318462	117318964	(131637458)	+	LTR79	LTR/ERVL	1	519	(8)	201127
17	4.9	0.0	0.0	chr1	117318965	117318985	(131637437)	+	(A)n	Simple_repeat	1	21	(0)	201128
2031	20.9	6.4	8.5	chr1	117401139	117401319	(131555103)	C	L1MD2	LINE/L1	(673)	5686	5526	201254
268	33.3	0.0	0.0	chr1	117401555	117401626	(131554796)	C	MER5A	DNA/hAT-Charlie	(1)	188	117	201256
272	27.1	3.4	1.2	chr1	117401578	117401663	(131554759)	+	MER5A1	DNA/hAT-Charlie	36	123	(43)	201257
27814	3.3	0.4	0.1	chr1	119020632	119026648	(129929774)	+	L1PA3	LINE/L1	124	6155	(0)	203483
2021	6.2	0.4	0.0	chr1	119852917	119853157	(129103265)	+	L1PA6	LINE/L1	5909	6150	(4)	204657
1673	22.0	22.9	0.0	chr1	121092206	121092728	(127863694)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	3	206533
4340	15.8	8.0	1.1	chr1	121104420	121105221	(127851201)	C	MER21B	LTR/ERVL	(6)	862	1	206551
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
13	16.9	0.0	0.0	chr1	145823942	145823968	(103132454)	+	(GCC)n	Simple_repeat	1	27	(0)	211601
552	33.6	4.2	5.3	chr1	146781626	146781889	(102174533)	C	MIRb	SINE/MIR	(5)	263	3	213202
1972	16.4	0.0	0.7	chr1	147144010	147144314	(101812108)	C	AluSz	SINE/Alu	(9)	303	1	213709
10810	19.3	3.6	1.5	chr1	147144315	147144583	(101811839)	C	L1M3	LINE/L1	(3117)	3023	2754	213707
25614	4.2	0.2	0.1	chr1	147402385	147408529	(101547893)	+	L1PA4	LINE/L1	1	6152	(3)	214032
717	30.3	9.8	1.4	chr1	147558573	147558927	(101397495)	C	L3	LINE/CR1	(239)	3860	3473	214295
784	17.4	4.2	0.7	chr1	148378334	148378471	(100577951)	+	AluJo	SINE/Alu	1	143	(169)	215599
2312	7.4	0.3	0.7	chr1	148378606	148378904	(100577518)	+	AluSc	SINE/Alu	1	298	(11)	215600
317	30.9	12.5	4.4	chr1	151546914	151547096	(97409326)	C	MamTip2	DNA/hAT-Tip100	(104)	201	2	221449
232	28.1	9.7	8.0	chr1	151717511	151717622	(97238800)	+	L2a	LINE/L2	3297	3410	(16)	221785
3027	14.1	0.9	0.0	chr1	153326953	153327405	(95629017)	+	L1P2	LINE/L1	4	460	(5724)	223915
7197	24.8	4.8	3.9	chr1	153327440	153330011	(95626411)	C	L1MC5	LINE/L1	(465)	2526	183	223916
12	24.1	0.0	0.0	chr1	153678256	153678289	(95278133)	+	(CACA)n	Simple_repeat	1	34	(0)	224528
25	25.5	3.5	2.2	chr1	153678730	153678816	(95277606)	+	(CT)n	Simple_repeat	1	90	(0)	224529
27	14.0	0.0	0.0	chr1	153679142	153679188	(95277234)	+	(CTG)n	Simple_repeat	1	47	(0)	224530
1996	13.4	3.1	0.0	chr1	154042728	154043011	(94913411)	C	AluJb	SINE/Alu	(19)	293	1	225329
2232	11.4	0.0	0.0	chr1	154043022	154043319	(94913103)	C	AluSz6	SINE/Alu	(14)	298	1	225330
183	17.3	11.9	5.5	chr1	154324641	154324695	(94631727)	+	Tigger19b	DNA/TcMar-Tigger	292	350	(200)	225935
337	23.1	15.0	0.0	chr1	154442285	154442392	(94514030)	C	L2c	LINE/L2	(229)	3158	3032	226191
2555	7.4	0.0	0.0	chr1	154503306	154503617	(94452805)	+	AluSx	SINE/Alu	1	312	(0)	226306
1022	25.2	11.1	1.1	chr1	154536540	154536904	(94419518)	C	L1ME1	LINE/L1	(16)	6163	5758	226391
237	26.2	19.5	0.0	chr1	154536907	154537009	(94419413)	C	L2	LINE/L2	(601)	2818	2691	226390
694	36.2	7.4	0.3	chr1	154537005	154537342	(94419080)	+	L2a	LINE/L2	2979	3342	(84)	226392
443	26.6	4.0	9.7	chr1	154559240	154559476	(94396946)	+	MIRc	SINE/MIR	20	242	(26)	226416
2392	5.6	0.3	0.3	chr1	155194029	155194314	(93762108)	+	AluSg4	SINE/Alu	6	291	(19)	227524
11	13.3	5.7	2.7	chr1	156357684	156357718	(92598704)	+	(GGTGTG)n	Simple_repeat	1	37	(0)	230008
196	31.4	6.4	8.9	chr1	156444433	156444544	(92511878)	C	L2a	LINE/L2	(1884)	1535	1427	230130
17	18.7	0.0	4.3	chr1	156444648	156444693	(92511729)	+	(TTCA)n	Simple_repeat	1	46	(0)	230143
215	27.3	3.0	1.5	chr1	156752099	156752165	(92204257)	C	L2c	LINE/L2	(1)	3374	3307	230675
323	33.2	5.7	3.9	chr1	156892180	156892325	(92064097)	+	MIRb	SINE/MIR	77	225	(43)	230940
2074	13.9	0.3	1.9	chr1	156892574	156892753	(92063669)	C	AluJb	SINE/Alu	(0)	312	138	230942
2326	12.5	2.1	1.3	chr1	157251935	157252306	(91704116)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	231498
2208	12.1	0.0	0.0	chr1	157535944	157536241	(91420181)	C	AluSx1	SINE/Alu	(14)	298	1	231846
23621	6.8	1.1	0.2	chr1	157901885	157907987	(91048435)	+	L1PA6	LINE/L1	5	6152	(2)	232338
22376	10.6	1.2	1.6	chr1	159616080	159622573	(89333849)	+	L1PA7	LINE/L1	8	6469	(0)	234500
1938	21.8	14.9	0.6	chr1	159672644	159673316	(89283106)	+	LTR50	LTR/ERVL	3	788	(7)	234575
785	19.3	4.7	0.0	chr1	159775319	159775499	(89180923)	C	MLT1E	LTR/ERVL-MaLR	(0)	653	464	234734
20371	12.9	1.9	1.9	chr1	160557756	160561017	(88395405)	+	L1PA11	LINE/L1	410	3696	(2635)	235926
15889	7.6	5.3	0.1	chr1	160892555	160894885	(88061537)	+	L1PA5	LINE/L1	7	2459	(3687)	236444
346	27.4	11.1	3.0	chr1	161097880	161098011	(87858411)	C	MIR3	SINE/MIR	(63)	145	2	236863
7067	6.3	1.8	2.6	chr1	161280844	161282441	(87673981)	C	SVA_D	Retroposon/SVA	(3)	1383	2	237210
5670	19.9	3.7	2.5	chr1	164508061	164508600	(84447822)	C	ERVL-B4-int	LTR/ERVL	(4533)	1181	647	242213
1950	17.0	0.0	1.9	chr1	164508601	164508911	(84447511)	C	AluJb	SINE/Alu	(6)	306	2	242214
2698	3.0	0.0	0.3	chr1	164611238	164611537	(84344885)	C	AluY	SINE/Alu	(12)	299	1	242400
16392	9.0	1.7	1.9	chr1	165108731	165109710	(83846712)	C	L1PA6	LINE/L1	(5204)	980	5	243098
21596	9.7	0.8	0.4	chr1	166423470	166429912	(82526510)	C	L1PA7	LINE/L1	(13)	6456	1	245255
12	11.1	6.9	0.0	chr1	166975401	166975429	(81980993)	+	(GCCGG)n	Simple_repeat	1	31	(0)	245958
19	23.1	2.6	5.0	chr1	166975542	166975619	(81980803)	+	(CCG)n	Simple_repeat	1	80	(0)	245959
2316	21.3	12.2	0.5	chr1	166987024	166987623	(81968799)	C	L1ME1	LINE/L1	(0)	6179	5500	245979
285	30.8	4.5	6.5	chr1	166987625	166987853	(81968569)	+	L1MEc	LINE/L1	3533	3756	(2563)	245976
2170	14.7	0.3	0.3	chr1	166988068	166988373	(81968049)	+	AluJb	SINE/Alu	1	306	(6)	245980
5599	6.2	4.0	1.8	chr1	167029218	167030442	(81925980)	+	SVA_B	Retroposon/SVA	11	1383	(0)	246036
7484	11.8	1.9	1.8	chr1	167571242	167572359	(81384063)	C	L1P3	LINE/L1	(5338)	1123	5	246917
400	32.8	0.8	0.6	chr1	167572367	167572529	(81383893)	C	MIRc	SINE/MIR	(104)	164	3	246914
9035	15.8	5.6	0.4	chr1	167607054	167608599	(81347823)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	246979
16	11.6	0.0	0.0	chr1	167926611	167926638	(81029784)	+	(CTG)n	Simple_repeat	1	28	(0)	247552
431	13.5	0.0	0.0	chr1	167926639	167926712	(81029710)	+	MER20	DNA/hAT-Charlie	93	166	(53)	247553
274	32.0	14.9	5.5	chr1	167926762	167927052	(81029370)	+	L2c	LINE/L2	3007	3329	(58)	247554
10597	3.0	0.7	7.8	chr1	168207184	168208656	(80747766)	C	SVA_C	Retroposon/SVA	(17)	1367	1	248007
10161	12.5	1.8	0.6	chr1	168354882	168356567	(80599855)	C	L1PA16	LINE/L1	(1152)	4994	3256	248247
22847	9.7	1.2	1.6	chr1	169407627	169414027	(79542395)	+	L1PA7	LINE/L1	1	6467	(2)	249901
12655	10.4	0.8	3.1	chr1	170456362	170458546	(78497876)	C	L1PA7	LINE/L1	(4330)	2169	1	251338
3183	24.1	6.1	3.8	chr1	170458538	170459669	(78496753)	C	L1MEg	LINE/L1	(4870)	1214	55	251340
22580	7.1	0.5	0.5	chr1	170810749	170816890	(78139532)	+	L1PA6	LINE/L1	1	6121	(33)	251805
13	4.1	3.7	3.6	chr1	171670997	171671023	(77285399)	+	(GGGCT)n	Simple_repeat	1	28	(0)	253138
1182	15.7	1.7	6.2	chr1	171671168	171671244	(77285178)	C	MLT1C	LTR/ERVL-MaLR	(234)	233	166	253137
2625	5.6	0.0	0.0	chr1	171671245	171671546	(77284876)	+	AluY	SINE/Alu	2	303	(8)	253139
12	4.7	0.0	7.7	chr1	171741943	171741968	(77214454)	+	(CGGG)n	Simple_repeat	1	26	(0)	253260
262	30.9	8.4	1.3	chr1	171742512	171742665	(77213757)	C	MIR3	SINE/MIR	(11)	197	32	253261
795	32.0	4.5	6.8	chr1	172055099	172055666	(76900756)	+	L2a	LINE/L2	2879	3424	(2)	253735
27701	2.9	0.0	0.0	chr1	172055830	172061861	(76894561)	+	L1PA3	LINE/L1	125	6155	(0)	253736
24060	6.7	1.0	0.3	chr1	172301909	172308031	(76648391)	+	L1PA6	LINE/L1	2	6152	(2)	254068
2202	12.3	0.0	1.6	chr1	174143212	174143520	(74812902)	+	AluSx1	SINE/Alu	1	304	(8)	256785
238	8.5	9.6	2.1	chr1	174143522	174143569	(74812853)	+	L2	LINE/L2	2410	2461	(958)	256786
12415	10.3	2.2	0.9	chr1	174143571	174146189	(74810233)	+	L1PA7	LINE/L1	1	2642	(3819)	256787
10018	9.3	3.0	0.0	chr1	174652320	174653725	(74302697)	C	L1PA7	LINE/L1	(5009)	1452	4	257475
2128	13.5	11.7	1.1	chr1	175892415	175892796	(73063626)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	259410
26993	3.1	0.4	0.0	chr1	176002355	176008367	(72948055)	C	L1PA2	LINE/L1	(0)	6155	127	259555
1152	26.1	10.8	4.5	chr1	176008367	176009306	(72947116)	C	L1M4	LINE/L1	(1262)	1892	405	259556
14	33.3	1.4	1.4	chr1	176207201	176207269	(72749153)	+	(CCG)n	Simple_repeat	1	70	(0)	259874
15	20.5	5.1	0.0	chr1	176207252	176207310	(72749112)	+	(GC)n	Simple_repeat	1	62	(0)	259875
308	34.3	2.2	3.2	chr1	177083882	177084068	(71872354)	C	Plat_L3	LINE/CR1	(123)	3463	3279	261156
1749	24.0	3.2	1.5	chr1	177997564	177998020	(70958402)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	1	262404
28037	1.9	0.0	0.0	chr1	178314792	178320818	(70635604)	C	L1PA2	LINE/L1	(3)	6152	125	262900
3461	23.5	0.1	4.7	chr1	178913927	178914657	(70041765)	C	L1PA16	LINE/L1	(5589)	1197	500	263831
1762	14.4	3.1	4.7	chr1	179241338	179241461	(69714961)	C	AluJo	SINE/Alu	(188)	124	2	264436
332	19.0	1.7	17.5	chr1	179241462	179241527	(69714895)	C	MER112	DNA/hAT-Charlie	(120)	141	82	264434
11019	10.6	1.5	1.5	chr1	179477675	179478817	(69477605)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	426	264882
266	34.1	0.0	0.0	chr1	180216552	180216636	(68739786)	C	L2a	LINE/L2	(1)	3425	3341	266058
203	26.0	0.0	1.2	chr1	180216786	180216857	(68739565)	C	MIR	SINE/MIR	(155)	113	44	266059
270	20.8	14.7	2.4	chr1	180270175	180270263	(68686159)	+	MIR	SINE/MIR	166	268	(0)	266132
266	27.4	5.9	5.0	chr1	181042894	181042993	(67913429)	C	L2b	LINE/L2	(5)	3370	3270	267358
1629	15.2	7.9	0.0	chr1	181043442	181043698	(67912724)	+	AluJr	SINE/Alu	2	280	(32)	267359
310	32.3	19.1	5.2	chr1	182028926	182029560	(66926862)	+	L2b	LINE/L2	2539	3298	(77)	268744
197	34.6	8.3	1.5	chr1	182091645	182091779	(66864643)	+	L3	LINE/CR1	1742	1886	(2213)	268826
1156	27.2	11.1	0.0	chr1	182091884	182092218	(66864204)	C	MLT1J1	LTR/ERVL-MaLR	(0)	444	68	268827
12681	10.9	2.0	1.2	chr1	182218466	182220629	(66735793)	+	L1PA7	LINE/L1	7	2173	(4326)	269043
415	22.5	4.1	0.0	chr1	182612262	182612390	(66344032)	C	MIR	SINE/MIR	(17)	251	104	269743
13	15.1	5.1	2.4	chr1	183471444	183471500	(65484922)	+	(CGCC)n	Simple_repeat	1	58	(0)	271187
851	20.7	1.6	3.1	chr1	183610735	183610928	(65345494)	+	MLT1F2	LTR/ERVL-MaLR	368	558	(2)	271415
304	29.9	4.9	0.0	chr1	183677444	183677540	(65278882)	C	L3	LINE/CR1	(784)	3315	3214	271501
4676	8.5	0.7	0.3	chr1	183684428	183685043	(65271379)	C	L1PA7	LINE/L1	(5833)	628	11	271509
16	18.9	0.0	0.0	chr1	183685045	183685080	(65271342)	+	(TATTTA)n	Simple_repeat	1	36	(0)	271510
341	34.2	3.7	4.2	chr1	184527223	184527387	(64429035)	C	L2a	LINE/L2	(1)	3425	3262	272780
760	27.7	6.7	2.9	chr1	184527649	184527893	(64428529)	+	MIRb	SINE/MIR	5	259	(9)	272781
1962	11.9	1.0	5.8	chr1	184648670	184648979	(64307443)	+	AluSx	SINE/Alu	1	295	(17)	272983
2297	22.7	8.4	3.1	chr1	184648980	184649139	(64307283)	C	MER20B	DNA/hAT-Charlie	(580)	203	50	272982
22256	7.2	1.4	0.1	chr1	185586405	185592491	(63363931)	+	L1PA6	LINE/L1	1	6149	(5)	274475
352	33.7	6.5	4.7	chr1	186679921	186680132	(62276290)	C	MIRb	SINE/MIR	(51)	217	2	275943
13	14.3	4.8	4.5	chr1	186680276	186680317	(62276105)	+	(GGCGC)n	Simple_repeat	1	44	(0)	275944
27469	2.9	0.0	0.1	chr1	189468737	189474768	(59481654)	C	L1PA3	LINE/L1	(3)	6152	127	279599
2281	15.1	3.7	0.2	chr1	190604131	190604543	(58351879)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	281128
12500	19.9	3.7	2.0	chr1	191125567	191126641	(57829781)	+	L1PA16	LINE/L1	1	1121	(5382)	281764
1333	16.1	1.2	0.4	chr1	192990783	192991035	(55965387)	C	LTR72	LTR/ERV1	(68)	451	197	284182
2674	11.9	2.6	4.9	chr1	192991036	192991505	(55964917)	+	MER41B	LTR/ERV1	1	459	(175)	284183
5643	6.5	0.7	2.5	chr1	193436887	193437673	(55518749)	C	SVA_C	Retroposon/SVA	(0)	1384	613	284868
2053	14.4	10.0	0.2	chr1	193437686	193438262	(55518160)	C	L1M1	LINE/L1	(5294)	2271	1638	284867
5237	13.2	1.1	2.7	chr1	196933510	196934428	(52021994)	+	LTR12C	LTR/ERV1	3	906	(673)	289263
15	7.6	3.6	0.0	chr1	197902930	197902957	(51053465)	+	(CCCGC)n	Simple_repeat	1	29	(0)	290519
25207	6.4	0.8	0.1	chr1	199647363	199653472	(49302950)	+	L1PA5	LINE/L1	8	6153	(1)	292801
1966	12.1	0.3	5.6	chr1	200926940	200927262	(48029160)	C	AluSx	SINE/Alu	(6)	306	1	295227
1094	23.7	8.8	5.6	chr1	200927263	200927502	(48028920)	C	L1ME1	LINE/L1	(953)	5193	4929	295218
194	31.6	2.1	5.9	chr1	201264358	201264458	(47691964)	+	L2a	LINE/L2	2996	3092	(334)	295744
1793	15.5	0.9	8.0	chr1	201683320	201683684	(47272738)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	296475
5598	18.3	4.8	3.5	chr1	201683685	201684467	(47271955)	C	L1MC3	LINE/L1	(494)	7291	6494	296474
5695	4.2	2.5	0.4	chr1	203266131	203266831	(45689591)	C	SVA_B	Retroposon/SVA	(0)	1383	668	299313
959	7.6	1.5	0.8	chr1	203266834	203266965	(45689457)	C	AluSx	SINE/Alu	(179)	133	1	299314
10177	4.2	0.6	8.5	chr1	203841158	203842622	(45113800)	C	SVA_B	Retroposon/SVA	(2)	1381	34	300437
18	24.0	1.6	3.2	chr1	204828678	204828739	(44127683)	+	(GCG)n	Simple_repeat	1	63	(0)	302355
13	23.5	0.0	7.0	chr1	204828872	204828928	(44127494)	+	(CCCTC)n	Simple_repeat	1	57	(0)	302356
17	26.0	0.0	5.6	chr1	205631508	205631578	(43324844)	+	(CCCGGC)n	Simple_repeat	1	71	(0)	303802
15	29.1	1.9	0.0	chr1	205631725	205631778	(43324644)	+	(CGG)n	Simple_repeat	1	55	(0)	303803
357	20.0	1.2	0.0	chr1	205772079	205772158	(43184264)	+	MIR	SINE/MIR	166	246	(16)	304073
2276	14.7	8.5	0.0	chr1	206721000	206721387	(42235035)	+	MSTB	LTR/ERVL-MaLR	1	424	(2)	305579
3996	17.9	1.8	6.9	chr1	207421646	207422459	(41533963)	C	HERVL18-int	LTR/ERVL	(2556)	3491	2720	306634
6397	11.1	6.2	0.6	chr1	207742195	207743985	(41212437)	+	HUERS-P3b-int	LTR/ERV1	750	2642	(4776)	307095
2829	21.9	3.3	9.6	chr1	207764617	207765614	(41190808)	+	L1ME1	LINE/L1	3289	4221	(1925)	307113
2498	22.3	5.6	3.0	chr1	207765603	207766314	(41190108)	+	L1ME1	LINE/L1	5433	6164	(15)	307113
243	29.6	0.0	0.0	chr1	207998052	207998122	(40958300)	C	MIRb	SINE/MIR	(24)	244	174	307455
2169	11.3	0.7	0.7	chr1	208891593	208891893	(40064529)	C	AluSx	SINE/Alu	(11)	301	1	308844
15	20.4	0.0	0.0	chr1	211259202	211259230	(37697192)	+	(C)n	Simple_repeat	1	29	(0)	312388
4854	13.5	2.7	1.5	chr1	211415376	211416286	(37540136)	+	L1MA4	LINE/L1	5258	6179	(121)	312654
2128	13.2	0.0	2.2	chr1	211864328	211864645	(37091777)	+	AluSz	SINE/Alu	2	312	(0)	313521
15640	13.4	3.5	5.5	chr1	211864646	211864893	(37091529)	C	L1MC1	LINE/L1	(2045)	4628	4417	313514
2093	16.1	0.0	0.6	chr1	211864894	211865204	(37091218)	C	AluSz	SINE/Alu	(1)	311	3	313522
15640	13.4	3.5	5.5	chr1	211865205	211865931	(37090491)	C	L1MC1	LINE/L1	(2257)	4416	3653	313514
5566	6.9	3.8	1.7	chr1	212014542	212015727	(36940695)	+	SVA_B	Retroposon/SVA	24	1384	(0)	313784
266	28.1	20.0	1.0	chr1	212465581	212465778	(36490644)	+	MIRc	SINE/MIR	20	264	(4)	314560
1454	17.0	12.7	8.8	chr1	212465933	212466010	(36490412)	C	MSTA1	LTR/ERVL-MaLR	(0)	465	405	314561
10383	3.8	0.0	11.8	chr1	212724207	212725775	(36230647)	+	SVA_B	Retroposon/SVA	1	1383	(0)	315039
37	0.0	6.9	1.6	chr1	212824526	212824583	(36131839)	+	(AAGAG)n	Simple_repeat	1	62	(0)	315229
964	26.2	4.6	2.4	chr1	213605821	213606199	(35350223)	+	X1_LINE	LINE/CR1	178	565	(80)	316507
265	30.4	6.4	0.0	chr1	213617100	213617201	(35339221)	C	LTR88b	LTR/Gypsy?	(73)	764	656	316525
1233	25.5	9.2	2.0	chr1	214312303	214313119	(34643303)	C	L2a	LINE/L2	(1)	3425	2540	317532
11	18.8	4.3	4.2	chr1	214383490	214383535	(34572887)	+	(TGGCCC)n	Simple_repeat	1	48	(0)	317615
15	0.0	0.0	4.3	chr1	214383706	214383728	(34572694)	+	(CCT)n	Simple_repeat	1	23	(0)	317616
24912	7.1	0.6	0.7	chr1	215532202	215538371	(33418051)	+	L1PA5	LINE/L1	8	6154	(0)	319204
341	34.5	0.8	4.5	chr1	216019424	216019592	(32936830)	+	MIR3	SINE/MIR	17	172	(36)	319833
16215	16.3	3.2	1.8	chr1	217144367	217150750	(31805672)	+	L1MC1	LINE/L1	11	7952	(8)	321307
4587	16.0	4.3	1.1	chr1	217292744	217293575	(31662847)	+	MER6	DNA/TcMar-Tigger	5	864	(1)	321514
28	25.1	0.0	1.3	chr1	218345395	218345471	(30610951)	+	GA-rich	Low_complexity	1	77	(0)	323090
13	10.5	12.2	0.0	chr1	218345793	218345833	(30610589)	+	(GGAGCA)n	Simple_repeat	1	46	(0)	323091
34	7.5	0.0	0.0	chr1	218346051	218346093	(30610329)	+	(CA)n	Simple_repeat	1	43	(0)	323092
13	14.9	8.1	0.0	chr1	218346097	218346133	(30610289)	+	(TGC)n	Simple_repeat	1	40	(0)	323093
2095	23.7	3.2	4.8	chr1	219027269	219027831	(29928591)	C	MLT2B3	LTR/ERVL	(0)	554	1	324077
1201	35.2	10.1	5.3	chr1	219863309	219863570	(29092852)	+	ERVL-E-int	LTR/ERVL	1964	2275	(3392)	325249
26294	2.9	0.2	0.2	chr1	219863571	219869595	(29086827)	+	L1PA3	LINE/L1	131	6154	(1)	325252
1978	15.4	0.7	0.0	chr1	219962068	219962359	(28994063)	C	AluSz6	SINE/Alu	(18)	294	1	325396
1594	21.0	0.0	1.8	chr1	219962379	219962664	(28993758)	+	AluJr	SINE/Alu	2	282	(30)	325397
728	25.4	1.1	2.3	chr1	219962689	219962865	(28993557)	+	U3	snRNA	43	217	(0)	325398
12	19.3	0.0	5.1	chr1	220094064	220094102	(28862320)	+	(CCGCC)n	Simple_repeat	1	39	(0)	325675
1399	19.3	14.9	1.7	chr1	220390166	220390518	(28565904)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	326148
1249	22.3	1.6	11.8	chr1	220390542	220390958	(28565464)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	326149
26	0.0	0.0	0.0	chr1	220527824	220527848	(28428574)	+	(ACAA)n	Simple_repeat	1	25	(0)	326368
15	14.4	0.0	0.0	chr1	220527854	220527877	(28428545)	+	(A)n	Simple_repeat	1	24	(0)	326369
31	9.2	0.0	0.0	chr1	220528033	220528079	(28428343)	+	(GGA)n	Simple_repeat	1	47	(0)	326370
13	13.2	6.7	4.2	chr1	220528171	220528215	(28428207)	+	(CGCGC)n	Simple_repeat	1	48	(0)	326371
373	30.7	6.0	6.9	chr1	223097818	223098034	(25858388)	+	LTR33B	LTR/ERVL	2	216	(287)	330190
1942	15.4	0.0	0.3	chr1	223306497	223306782	(25649640)	C	AluJb	SINE/Alu	(17)	295	11	330501
189	33.3	2.4	6.8	chr1	223306869	223307000	(25649422)	+	MIR3	SINE/MIR	74	199	(9)	330502
729	15.6	6.0	1.6	chr1	223307033	223307160	(25649262)	C	AluJb	SINE/Alu	(178)	134	1	330503
27877	3.8	0.2	0.1	chr1	223366543	223372687	(25583735)	C	L1PA3	LINE/L1	(1)	6154	9	330587
13	19.2	2.2	4.3	chr1	223393205	223393249	(25563173)	+	(ACCCC)n	Simple_repeat	1	46	(0)	330632
15	21.8	0.0	0.0	chr1	223748970	223749006	(25207416)	+	GA-rich	Low_complexity	1	37	(0)	331158
17	19.6	6.7	3.8	chr1	223845956	223846030	(25110392)	+	(CCGCG)n	Simple_repeat	1	80	(0)	331314
12	21.7	0.0	0.0	chr1	224894937	224894968	(24061454)	+	(ACAATT)n	Simple_repeat	1	32	(0)	333325
794	18.5	0.0	9.2	chr1	224895212	224895320	(24061102)	+	MER5B	DNA/hAT-Charlie	1	109	(69)	333326
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
24542	7.3	0.9	0.1	chr1	225211918	225218017	(23738405)	C	L1PA5	LINE/L1	(11)	6143	4	333684
14	22.2	0.0	2.6	chr1	225652948	225652986	(23303436)	+	(CCT)n	Simple_repeat	1	39	(0)	334307
22	24.4	3.0	4.8	chr1	226062580	226062602	(22893820)	+	G-rich	Low_complexity	53	103	(0)	335129
20	17.0	1.7	5.1	chr1	226062730	226062787	(22893635)	+	(CGC)n	Simple_repeat	1	59	(0)	335131
1566	15.0	5.1	1.1	chr1	226408353	226408632	(22547790)	C	AluJr	SINE/Alu	(20)	292	1	335835
269	31.1	3.9	0.8	chr1	226545589	226545711	(22410711)	+	MLT1K	LTR/ERVL-MaLR	38	164	(431)	336094
195	27.7	15.3	5.1	chr1	226545721	226545767	(22410655)	+	L2c	LINE/L2	2763	2821	(598)	336092
1807	22.6	7.0	3.9	chr1	226545768	226546338	(22410084)	+	MLT1G	LTR/ERVL-MaLR	2	591	(0)	336095
931	23.5	3.2	2.3	chr1	226833945	226834368	(22122054)	+	HERVH-int	LTR/ERV1	1	459	(7254)	336564
16349	18.7	0.9	2.1	chr1	226834435	226837538	(22118884)	+	HERVH-int	LTR/ERV1	792	3858	(3855)	336564
3305	24.5	8.3	4.3	chr1	227239604	227241815	(21714607)	+	L1ME2	LINE/L1	3844	6159	(5)	337145
9246	6.1	1.2	9.6	chr1	227275584	227277091	(21679331)	+	SVA_A	Retroposon/SVA	8	1387	(0)	337206
5544	11.7	3.2	0.7	chr1	227632800	227633559	(21322863)	C	LTR17	LTR/ERV1	(0)	780	1	337721
258	26.0	7.7	0.0	chr1	227762838	227762933	(21193489)	C	L1MD3	LINE/L1	(389)	7606	7503	337864
22	22.6	2.4	4.7	chr1	228082878	228082977	(20873445)	+	G-rich	Low_complexity	1	97	(0)	338274
373	23.1	6.3	2.2	chr1	228094693	228094829	(20861593)	C	HAL1	LINE/L1	(812)	1695	1553	338284
1540	17.9	8.0	8.0	chr1	228240484	228240896	(20715526)	C	LTR42	LTR/ERVL	(0)	495	83	338486
180	30.2	0.0	2.3	chr1	228278021	228278064	(20678358)	+	OldhAT1	DNA/hAT-Ac	2541	2583	(265)	338520
3944	15.3	1.4	0.5	chr1	228345989	228346633	(20609789)	C	MER39B	LTR/ERV1	(2)	651	1	338579
2327	9.1	0.0	0.0	chr1	228621129	228621435	(20334987)	+	AluY	SINE/Alu	1	307	(4)	338912
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
248	34.4	0.0	3.1	chr1	228789030	228789125	(20167297)	+	L2c	LINE/L2	3251	3343	(44)	339193
4091	16.8	2.8	5.7	chr1	228840712	228841550	(20114872)	+	MER21C	LTR/ERVL	28	933	(5)	339270
255	27.6	14.7	0.0	chr1	228903652	228903767	(20052655)	+	LTR67B	LTR/ERVL	25	160	(460)	339382
222	32.4	12.3	2.6	chr1	229114379	229114606	(19841816)	C	L2c	LINE/L2	(0)	3387	3135	339713
279	32.9	0.0	0.0	chr1	229114751	229114826	(19841596)	+	L2c	LINE/L2	3279	3354	(33)	339712
425	22.5	4.8	0.0	chr1	229129988	229130107	(19826315)	C	LTR67B	LTR/ERVL	(466)	154	29	339736
20	11.7	2.7	0.0	chr1	229217185	229217221	(19739201)	+	(TTA)n	Simple_repeat	1	38	(0)	339874
2445	6.9	0.0	2.5	chr1	229343729	229344045	(19612377)	+	AluY	SINE/Alu	1	309	(2)	340088
226	35.2	5.7	1.1	chr1	229390847	229391030	(19565392)	+	MLT1O	LTR/ERVL-MaLR	162	354	(188)	340179
1708	18.6	2.0	0.7	chr1	229391247	229391542	(19564880)	C	AluJb	SINE/Alu	(8)	304	5	340180
1891	18.5	21.5	6.0	chr1	229809113	229809767	(19146655)	C	LTR48	LTR/ERV1	(0)	787	3	340938
12	18.1	0.0	3.0	chr1	230067368	230067400	(18889022)	+	(GCGCCG)n	Simple_repeat	1	33	(0)	341373
20	20.9	4.4	5.3	chr1	230067416	230067506	(18888916)	+	(GCCCCCT)n	Simple_repeat	1	95	(0)	341374
235	31.8	8.6	0.0	chr1	230363054	230363138	(18593284)	+	MIRb	SINE/MIR	103	195	(73)	341750
2421	9.2	0.0	0.0	chr1	230363300	230363594	(18592828)	+	AluSx1	SINE/Alu	1	295	(17)	341751
632	21.9	0.0	10.7	chr1	230499793	230499997	(18456425)	C	L1MB8	LINE/L1	(51)	6127	5945	341971
502	15.0	0.0	2.8	chr1	230500001	230500101	(18456321)	C	L1MB7	LINE/L1	(250)	5934	5839	341972
12	13.9	0.0	0.0	chr1	231422196	231422219	(17534203)	+	(GCC)n	Simple_repeat	1	24	(0)	343472
18	20.7	1.6	4.8	chr1	231422324	231422384	(17534038)	+	G-rich	Low_complexity	1	62	(0)	343473
12	17.2	4.9	2.3	chr1	231422410	231422450	(17533972)	+	(CCTCGG)n	Simple_repeat	1	43	(0)	343474
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
9841	3.8	0.5	7.4	chr1	231453534	231455013	(17501409)	+	SVA_B	Retroposon/SVA	7	1383	(0)	343515
1566	31.3	9.2	4.2	chr1	232379815	232380650	(16575772)	+	MER45C	DNA/hAT-Tip100	72	953	(0)	344902
1554	30.2	12.5	5.7	chr1	232400266	232401201	(16555221)	+	L2	LINE/L2	274	1279	(2140)	344926
2142	13.7	1.6	1.9	chr1	232510044	232510364	(16446058)	+	Tigger3d	DNA/TcMar-Tigger	1	320	(1)	345022
300	31.0	9.8	0.0	chr1	234373847	234373975	(14582447)	C	MIRb	SINE/MIR	(86)	182	40	347763
16	0.0	0.0	0.0	chr1	234599677	234599693	(14356729)	+	(A)n	Simple_repeat	1	17	(0)	348156
12	19.3	0.0	5.1	chr1	234600126	234600164	(14356258)	+	G-rich	Low_complexity	1	39	(0)	348157
37	15.3	0.0	1.4	chr1	234600189	234600258	(14356164)	+	(GCCCC)n	Simple_repeat	1	70	(0)	348158
21	27.5	1.1	4.4	chr1	234610078	234610167	(14346255)	+	(CGC)n	Simple_repeat	1	91	(0)	348167
493	28.4	1.9	0.0	chr1	234893045	234893199	(14063223)	C	MER5A1	DNA/hAT-Charlie	(0)	166	9	348618
371	27.8	16.5	2.1	chr1	234893352	234893542	(14062880)	C	L2b	LINE/L2	(45)	3330	3107	348619
1994	14.7	0.0	2.9	chr1	235076373	235076686	(13879736)	+	AluSz	SINE/Alu	2	306	(6)	348977
426	19.8	1.0	0.0	chr1	235161595	235161690	(13794732)	+	L1MC4	LINE/L1	7946	8042	(0)	349156
1662	9.3	0.0	0.5	chr1	235396955	235397200	(13559222)	C	AluSc	SINE/Alu	(0)	309	73	349661
764	18.9	3.6	6.1	chr1	235408937	235409133	(13547289)	+	MER53	DNA/hAT	1	192	(1)	349691
1343	27.7	6.7	4.3	chr1	235512941	235513134	(13443288)	+	L2a	LINE/L2	3232	3426	(0)	349897
195	27.8	18.8	2.3	chr1	235513145	235513361	(13443061)	C	L2	LINE/L2	(1071)	2348	2088	349894
482	12.5	0.0	5.0	chr1	235513376	235513455	(13442967)	+	AluJb	SINE/Alu	86	161	(151)	349899
223	34.5	4.4	2.0	chr1	235513521	235513718	(13442704)	C	L2	LINE/L2	(1431)	1988	1786	349894
1529	24.1	5.8	1.9	chr1	235604353	235604779	(13351643)	C	MLT1C	LTR/ERVL-MaLR	(1)	466	22	350086
15	4.8	0.0	0.0	chr1	236065014	236065035	(12891387)	+	(CAG)n	Simple_repeat	1	22	(0)	350913
16	3.8	0.0	6.5	chr1	236065203	236065233	(12891189)	+	(AGGGG)n	Simple_repeat	1	31	(0)	350914
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
14	27.7	1.6	3.1	chr1	237042597	237042660	(11913762)	+	G-rich	Low_complexity	1	65	(0)	352680
13	22.5	0.0	7.4	chr1	237042888	237042941	(11913481)	+	(GGCC)n	Simple_repeat	1	54	(0)	352681
11228	12.2	2.3	0.2	chr1	237286561	237289326	(11667096)	C	L1PBa1	LINE/L1	(3755)	3107	255	353077
14	14.6	0.0	3.1	chr1	240091763	240091794	(8864628)	+	(GCG)n	Simple_repeat	1	32	(0)	357135
17	21.6	2.1	0.0	chr1	240091879	240091926	(8864496)	+	(AGCCGC)n	Simple_repeat	1	49	(0)	357136
15	16.7	2.9	0.0	chr1	240092260	240092293	(8864129)	+	(GGC)n	Simple_repeat	1	35	(0)	357137
2068	28.2	9.0	3.9	chr1	240162762	240163873	(8792549)	C	L1MEg	LINE/L1	(3017)	3129	1964	357254
1661	16.2	0.0	8.1	chr1	240163874	240164193	(8792229)	C	AluJr	SINE/Alu	(13)	299	6	357255
2068	26.1	10.7	6.1	chr1	240164194	240165169	(8791253)	C	L1MEg	LINE/L1	(4279)	1963	926	357254
23	22.7	1.6	0.0	chr1	241356738	241356799	(7599623)	+	(GCGCCCG)n	Simple_repeat	1	63	(0)	359175
30	24.1	0.9	4.7	chr1	241639705	241639834	(7316588)	+	(GGCGG)n	Simple_repeat	1	125	(0)	359585
18	29.4	1.5	0.0	chr1	241640173	241640238	(7316184)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	359586
1454	19.3	1.6	9.8	chr1	242475633	242476052	(6480370)	+	MLT1B	LTR/ERVL-MaLR	6	390	(0)	361043
2626	4.9	0.0	0.0	chr1	244299875	244300180	(4656242)	C	AluY	SINE/Alu	(5)	306	1	363927
15	0.0	4.5	0.0	chr1	244300244	244300265	(4656157)	+	(CCA)n	Simple_repeat	1	23	(0)	363928
1016	22.1	7.6	16.8	chr1	244302552	244303063	(4653359)	+	L1MC4	LINE/L1	6469	6929	(1113)	363934
4024	15.3	1.5	4.8	chr1	244303080	244303826	(4652596)	+	MER50	LTR/ERV1	1	722	(12)	363935
12	17.6	2.4	4.7	chr1	244451566	244451607	(4504815)	+	(CCCGGCG)n	Simple_repeat	1	43	(0)	364208
19	24.9	1.4	4.1	chr1	244451927	244451998	(4504424)	+	(CCCGC)n	Simple_repeat	1	73	(0)	364209
342	29.1	18.6	0.0	chr1	244760695	244760873	(4195549)	+	MIRb	SINE/MIR	45	264	(4)	364706
16	10.5	3.2	0.0	chr1	244863106	244863136	(4093286)	+	(CCCCG)n	Simple_repeat	1	32	(0)	364909
30	0.0	0.0	0.0	chr1	244863396	244863421	(4093001)	+	(AC)n	Simple_repeat	1	26	(0)	364910
17	20.4	2.1	2.1	chr1	244863617	244863663	(4092759)	+	(CCG)n	Simple_repeat	1	48	(0)	364911
14	31.3	0.0	0.0	chr1	244863779	244863829	(4092593)	+	(GCT)n	Simple_repeat	1	51	(0)	364912
26	6.3	0.0	0.0	chr1	244864025	244864058	(4092364)	+	(CTTCCT)n	Simple_repeat	1	34	(0)	364913
7195	5.2	24.0	1.4	chr1	245774666	245775730	(3180692)	+	SVA_E	Retroposon/SVA	2	1382	(0)	366512
22	20.3	3.4	5.5	chr1	246000329	246000416	(2956006)	+	A-rich	Low_complexity	1	91	(0)	366804
39998	13.4	4.3	3.1	chr1	246530404	246532861	(2423561)	+	HUERS-P3-int	LTR/ERV1	1057	3597	(5322)	367627
2369	8.6	0.3	0.3	chr10	75857	76160	(133721262)	+	AluSq2	SINE/Alu	1	304	(9)	371100
3455	6.1	0.7	0.2	chr10	746012	746471	(133050951)	+	L1PA3	LINE/L1	180	641	(5514)	371808
23343	2.5	0.1	0.0	chr10	746476	750115	(133047307)	+	L1PA3	LINE/L1	2513	6155	(0)	371808
2273	23.8	10.4	2.5	chr10	839438	840260	(132957162)	+	L1ME1	LINE/L1	5271	6165	(14)	371894
395	26.4	8.3	0.0	chr10	840419	840573	(132956849)	C	L1ME3Cz	LINE/L1	(321)	676	508	371895
24	31.8	1.2	0.0	chr10	2258934	2259014	(131538408)	+	(CA)n	Simple_repeat	1	82	(0)	373508
16	0.0	0.0	0.0	chr10	3331738	3331754	(130465668)	+	(A)n	Simple_repeat	1	17	(0)	374946
1294	7.0	3.9	0.0	chr10	3332289	3332460	(130464962)	C	AluYf1	SINE/Alu	(0)	311	133	374947
1571	17.0	1.6	1.6	chr10	3376268	3376572	(130420850)	+	Ricksha_0	DNA/MULE-MuDR	28	332	(1401)	375008
2938	11.3	5.9	0.2	chr10	3659579	3660023	(130137399)	+	MER4A1	LTR/ERV1	1	472	(0)	375385
1907	19.9	0.6	1.1	chr10	3815853	3816218	(129981204)	+	MLT1A0	LTR/ERVL-MaLR	2	365	(0)	375597
868	29.1	7.1	8.1	chr10	3816219	3816729	(129980693)	C	MLT1H1	LTR/ERVL-MaLR	(28)	527	23	375598
249	31.1	1.1	2.2	chr10	3854365	3854456	(129942966)	+	Charlie15a	DNA/hAT-Charlie	94	184	(40)	375646
2644	5.6	0.0	0.3	chr10	4513341	4513645	(129283777)	C	AluY	SINE/Alu	(7)	304	1	376577
21	0.0	7.5	4.7	chr10	4826284	4826323	(128971099)	+	(GCG)n	Simple_repeat	1	43	(0)	376971
12	14.1	3.0	2.9	chr10	4826624	4826656	(128970766)	+	G-rich	Low_complexity	1	34	(0)	376972
911	16.2	1.3	2.5	chr10	5945416	5945575	(127851847)	C	FRAM	SINE/Alu	(17)	159	2	378604
15	15.3	0.0	0.0	chr10	5977417	5977445	(127819977)	+	(GCA)n	Simple_repeat	1	29	(0)	378668
391	28.3	13.1	0.6	chr10	7488263	7488443	(126308979)	C	MIRb	SINE/MIR	(54)	214	8	381108
22	15.6	0.0	0.0	chr10	7488946	7488981	(126308441)	+	A-rich	Low_complexity	1	36	(0)	381109
2493	7.8	1.3	0.0	chr10	7828752	7829057	(125968365)	+	AluSx1	SINE/Alu	1	310	(2)	381684
3914	17.8	1.4	1.2	chr10	7829167	7829926	(125967496)	C	L1MC3	LINE/L1	(3)	7782	7021	381685
2101	10.9	6.6	0.0	chr10	8033082	8033364	(125764058)	+	AluSx	SINE/Alu	1	303	(9)	382041
868	37.0	10.6	2.6	chr10	10341387	10342291	(123455131)	C	L2	LINE/L2	(337)	3082	2098	385515
1176	26.7	10.8	0.5	chr10	10342413	10342826	(123454596)	C	LTR40b	LTR/ERVL	(0)	462	1	385516
2237	9.3	0.0	1.7	chr10	12140610	12140898	(121656524)	C	AluSc8	SINE/Alu	(26)	285	2	388276
10397	3.8	0.6	13.6	chr10	12522197	12523790	(121273632)	C	SVA_D	Retroposon/SVA	(0)	1386	1	389095
207	25.4	5.3	1.4	chr10	13366106	13366177	(120431245)	+	L3	LINE/CR1	4021	4095	(4)	390641
191	35.1	5.0	5.0	chr10	13366245	13366424	(120430998)	+	L2	LINE/L2	2616	2795	(624)	390642
2304	11.9	0.0	0.0	chr10	13366486	13366787	(120430635)	C	AluSz	SINE/Alu	(10)	302	1	390643
1951	19.7	2.4	5.0	chr10	14983012	14984376	(118813046)	+	SATR1	Satellite	1	1330	(1406)	393409
1315	23.8	12.4	6.2	chr10	14995226	14996674	(118800748)	C	SATR1	Satellite	(141)	1538	1	393417
1918	18.3	1.6	6.3	chr10	14996530	14999051	(118798371)	+	SATR2	Satellite	1	2402	(7)	393418
1172	27.7	10.4	3.7	chr10	15384207	15384743	(118412679)	+	MLT1K	LTR/ERVL-MaLR	1	577	(18)	394166
1520	16.9	0.0	0.4	chr10	15384941	15385177	(118412245)	+	AluJo	SINE/Alu	2	237	(75)	394167
14978	17.0	4.4	2.7	chr10	16801989	16805000	(116992422)	+	L1MC2	LINE/L1	3480	6589	(173)	396405
3681	11.4	3.6	0.4	chr10	17463911	17464421	(116333001)	+	MER1A	DNA/hAT-Charlie	1	528	(1)	397433
409	31.1	2.7	11.1	chr10	17464422	17464755	(116332667)	+	L2b	LINE/L2	2509	2815	(604)	397432
18	8.8	2.5	4.9	chr10	17617404	17617443	(116179979)	+	(CCCCG)n	Simple_repeat	1	41	(0)	397753
23154	10.1	2.2	0.5	chr10	18587498	18593887	(115203535)	+	L1PA8	LINE/L1	10	6487	(0)	399324
2315	11.2	0.0	1.0	chr10	19137325	19137635	(114659787)	+	AluSx3	SINE/Alu	2	309	(2)	400146
2381	8.0	0.0	0.7	chr10	21168767	21169067	(112628355)	+	AluY	SINE/Alu	1	299	(12)	403072
369	20.9	8.4	4.6	chr10	21413488	21413633	(112383789)	C	L1ME3Cz	LINE/L1	(668)	5511	5365	403632
14	10.7	0.0	5.9	chr10	21527274	21527307	(112270115)	+	G-rich	Low_complexity	1	34	(0)	403873
9522	3.1	0.4	21.7	chr10	21836885	21838642	(111958780)	+	SVA_C	Retroposon/SVA	3	1383	(1)	404410
17	24.0	0.0	6.1	chr10	22252433	22252498	(111544924)	+	G-rich	Low_complexity	1	66	(0)	404996
14	24.9	3.9	0.0	chr10	22320919	22320970	(111476452)	+	G-rich	Low_complexity	1	54	(0)	405115
16	18.9	0.0	0.0	chr10	22321042	22321071	(111476351)	+	G-rich	Low_complexity	1	30	(0)	405116
18	6.3	6.1	0.0	chr10	22321136	22321168	(111476254)	+	(CCCTC)n	Simple_repeat	1	35	(0)	405117
17	25.6	4.2	1.4	chr10	22321169	22321203	(111476219)	+	(CCGC)n	Simple_repeat	4	74	(0)	405118
54	21.9	2.5	2.5	chr10	22321360	22321365	(111476057)	+	(GAGGCG)n	Simple_repeat	1	39	(122)	405119
56	25.5	0.0	0.0	chr10	22321366	22321502	(111475920)	+	GA-rich	Low_complexity	1	137	(0)	405120
54	21.9	2.5	2.5	chr10	22321503	22321516	(111475906)	+	(GAGGCG)n	Simple_repeat	40	161	(0)	405119
26264	2.6	0.3	0.1	chr10	22403138	22409152	(111388270)	C	L1PA3	LINE/L1	(4)	6151	124	405221
383	24.2	14.8	3.0	chr10	22694166	22694331	(111103091)	+	Charlie7	DNA/hAT-Charlie	13	201	(2411)	405641
1485	19.9	3.6	1.5	chr10	22694424	22694749	(111102673)	+	Charlie7	DNA/hAT-Charlie	1502	1834	(778)	405642
14242	16.2	2.3	0.9	chr10	22877650	22880653	(110916769)	C	L1PB3	LINE/L1	(364)	6506	3463	405950
17765	7.7	0.1	0.8	chr10	22880665	22882940	(110914482)	+	L1PA7	LINE/L1	9	2270	(3914)	405952
15	22.4	0.0	5.8	chr10	23192809	23192860	(110604562)	+	(CGG)n	Simple_repeat	1	52	(0)	406425
32	20.0	5.7	3.9	chr10	23192932	23193054	(110604368)	+	(CGG)n	Simple_repeat	1	130	(0)	406426
22	23.9	0.0	0.0	chr10	23193209	23193263	(110604159)	+	G-rich	Low_complexity	1	55	(0)	406427
540	17.2	0.0	4.3	chr10	23826399	23826491	(109970931)	+	AluJr	SINE/Alu	129	217	(95)	407508
267	38.7	7.5	3.6	chr10	23826912	23827104	(109970318)	C	L2b	LINE/L2	(0)	3375	3175	407509
15	15.5	0.0	5.0	chr10	24552407	24552446	(109244976)	+	(AAGCC)n	Simple_repeat	1	40	(0)	408669
28139	1.7	0.1	0.0	chr10	25515370	25521391	(108276031)	C	L1PA2	LINE/L1	(1)	6154	124	410306
4610	18.7	2.6	3.8	chr10	26841281	26842489	(106954933)	C	L1MA9	LINE/L1	(30)	6282	5083	412403
15	22.6	0.0	5.8	chr10	27998931	27998982	(105798440)	+	(CGC)n	Simple_repeat	1	52	(0)	414304
6284	14.6	2.1	0.7	chr10	30569833	30570902	(103226520)	C	L1MC1	LINE/L1	(990)	5156	4071	419002
365	20.4	2.2	1.1	chr10	30570901	30570989	(103226433)	C	L1MB8	LINE/L1	(1762)	4384	4295	418995
303	25.8	7.1	2.8	chr10	30570981	30571195	(103226227)	C	L1ME4c	LINE/L1	(213)	617	393	419003
11505	10.2	0.9	0.5	chr10	31954318	31955889	(101841533)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(51)	421044
5626	4.3	2.8	0.3	chr10	31978663	31979366	(101818056)	C	SVA_B	Retroposon/SVA	(13)	1370	649	421096
474	12.3	0.0	0.0	chr10	31979374	31979438	(101817984)	+	AluJo	SINE/Alu	235	299	(13)	421097
10636	4.0	1.4	3.8	chr10	32232902	32234313	(101563109)	C	SVA_B	Retroposon/SVA	(0)	1383	6	421616
1609	16.4	1.4	3.1	chr10	34917653	34917944	(98879478)	C	AluJr	SINE/Alu	(1)	311	25	425577
473	26.0	4.2	14.3	chr10	35073455	35073590	(98723832)	C	MIR	SINE/MIR	(0)	262	152	425897
2327	10.8	0.3	0.9	chr10	35073591	35073905	(98723517)	C	AluSq2	SINE/Alu	(0)	313	1	425898
1118	16.9	6.5	2.2	chr10	35725898	35726199	(98071223)	+	MSTA	LTR/ERVL-MaLR	211	446	(19)	427009
297	25.7	11.0	0.9	chr10	42865698	42865811	(90931611)	+	MIR	SINE/MIR	20	146	(116)	432670
372	27.1	5.2	1.6	chr10	42899526	42899668	(90897754)	C	LTR84b	LTR/ERVL	(5)	752	602	432716
1540	6.6	0.9	8.8	chr10	43306978	43307227	(90490195)	C	LTR12B	LTR/ERV1	(437)	230	1	433219
2160	11.3	0.3	0.3	chr10	43307614	43307915	(90489507)	+	AluSq2	SINE/Alu	1	302	(11)	433220
9580	5.8	1.4	11.8	chr10	43445684	43447222	(90350200)	C	SVA_B	Retroposon/SVA	(4)	1379	2	433542
200	29.1	6.5	0.0	chr10	44891396	44891481	(88905941)	+	MIRc	SINE/MIR	3	94	(174)	435371
311	25.7	15.3	3.4	chr10	44891511	44891659	(88905763)	C	L2a	LINE/L2	(5)	3421	3252	435372
201	31.0	1.4	4.0	chr10	44891658	44891731	(88905691)	+	MIRc	SINE/MIR	114	185	(83)	435371
1267	21.6	4.6	3.4	chr10	44891807	44892169	(88905253)	C	L1MB4	LINE/L1	(0)	6180	5817	435373
3427	21.8	5.9	2.1	chr10	44919031	44919723	(88877699)	+	L1M4	LINE/L1	3866	4585	(1561)	435416
23357	8.8	0.7	0.4	chr10	45265802	45271952	(88525470)	+	L1PA6	LINE/L1	5	6153	(1)	435894
16	23.5	6.4	2.4	chr10	45672536	45672613	(88124809)	+	(CGCCAG)n	Simple_repeat	1	83	(0)	436407
13	36.1	0.0	2.6	chr10	45672635	45672657	(88124765)	+	(GCCC)n	Simple_repeat	1	76	(0)	436408
14	26.7	0.0	3.8	chr10	45672658	45672710	(88124712)	+	(CGCT)n	Simple_repeat	1	53	(0)	436409
6303	8.2	2.2	2.0	chr10	45864810	45866421	(87931001)	C	SVA_C	Retroposon/SVA	(13)	1370	1	436741
382	26.4	12.3	6.3	chr10	47236884	47237196	(86560226)	+	MLT1G	LTR/ERVL-MaLR	218	547	(8)	438916
236	30.1	4.6	0.0	chr10	47238710	47238792	(86558630)	C	MIR1_Amn	SINE/MIR	(91)	139	53	438919
195	27.8	2.7	6.5	chr10	47238935	47239011	(86558411)	+	MIRb	SINE/MIR	99	172	(96)	438920
498	28.1	13.2	4.8	chr10	47967104	47967477	(85829945)	C	HAL1ME	LINE/L1	(10)	2497	2088	439880
484	32.0	9.7	4.8	chr10	48270604	48271203	(85526219)	+	L2	LINE/L2	2370	3001	(418)	440329
2111	9.9	0.3	17.9	chr10	48585059	48585476	(85211946)	+	LTR14A	LTR/ERVK	1	344	(0)	440751
292	33.3	0.9	0.0	chr10	50261337	50261450	(83535972)	+	MamRep1894	DNA/hAT	9	123	(0)	443113
1658	20.1	0.0	2.1	chr10	50261699	50261986	(83535436)	+	AluJr	SINE/Alu	1	282	(30)	443114
5450	9.6	2.0	0.4	chr10	50547286	50548129	(83249293)	+	L1PA11	LINE/L1	3230	4087	(2059)	443521
27513	3.8	0.4	0.7	chr10	52730356	52736527	(81060895)	C	L1PA3	LINE/L1	(1)	6154	3	446708
1032	23.3	8.5	6.4	chr10	52806464	52806913	(80990509)	C	L1M5	LINE/L1	(2379)	3767	3308	446790
1133	13.8	0.0	1.2	chr10	54513242	54513427	(79283995)	C	AluSz6	SINE/Alu	(0)	312	134	448997
3151	16.6	4.4	0.7	chr10	55179305	55179892	(78617530)	+	LTR27D	LTR/ERV1	1	611	(4)	449825
186	34.6	1.8	4.5	chr10	55179934	55180045	(78617377)	C	L2c	LINE/L2	(38)	3349	3241	449827
244	22.0	3.3	0.0	chr10	55894163	55894221	(77903201)	C	MLT1L	LTR/ERVL-MaLR	(159)	451	391	450756
7765	18.0	1.8	1.4	chr10	57341697	57343697	(76453725)	C	HUERS-P3-int	LTR/ERV1	(5635)	3284	972	452610
10665	15.9	2.0	3.2	chr10	57578231	57580798	(76216624)	C	HUERS-P3b-int	LTR/ERV1	(4776)	2642	3	452899
23802	16.8	11.1	10.4	chr10	57788774	57791274	(76006148)	+	HUERS-P3b-int	LTR/ERV1	266	2969	(5950)	453164
23264	7.0	1.6	0.1	chr10	58417780	58423844	(75373578)	C	L1PA5	LINE/L1	(2)	6152	4	454114
12752	8.8	0.1	0.5	chr10	59776936	59778518	(74018904)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	4	456083
412	35.2	4.3	5.5	chr10	61878194	61878500	(71918922)	+	UCON8	DNA	680	982	(133)	459207
363	26.9	1.7	0.8	chr10	62460837	62460956	(71336466)	C	MER102c	DNA/hAT-Charlie	(0)	331	211	460106
241	20.9	10.7	3.6	chr10	62461665	62461803	(71335619)	+	L1MEi	LINE/L1	1176	1325	(887)	460107
16	4.5	0.0	0.0	chr10	63466140	63466162	(70331260)	+	(GGC)n	Simple_repeat	1	23	(0)	461841
14	15.2	0.0	7.1	chr10	63521224	63521265	(70276157)	+	(GCCCTG)n	Simple_repeat	1	42	(0)	461935
13	27.7	1.5	4.5	chr10	63521301	63521323	(70276099)	+	G-rich	Low_complexity	1	66	(0)	461936
17	8.3	4.8	4.5	chr10	63521324	63521365	(70276057)	+	(GGCG)n	Simple_repeat	1	44	(0)	461937
11	22.5	3.5	5.1	chr10	63521661	63521717	(70275705)	+	(GGCCTG)n	Simple_repeat	1	59	(0)	461938
29	22.2	5.7	3.8	chr10	63521784	63521907	(70275515)	+	(GCG)n	Simple_repeat	1	131	(0)	461939
2245	10.0	0.7	0.3	chr10	64825145	64825434	(68971988)	+	AluSq2	SINE/Alu	1	291	(22)	463942
23	7.9	5.0	0.0	chr10	64825435	64825474	(68971948)	+	(TAA)n	Simple_repeat	1	42	(0)	463943
231	28.8	5.7	8.3	chr10	65247040	65247183	(68550239)	+	L1MEh	LINE/L1	14	153	(2082)	464462
1516	12.1	3.4	0.8	chr10	67045453	67045710	(66751712)	C	LSU-rRNA_Hsa	rRNA	(1)	5034	4770	466963
333	29.4	8.0	0.9	chr10	67045714	67045863	(66751559)	C	MIRc	SINE/MIR	(35)	173	20	466964
4520	24.8	6.1	4.6	chr10	67632388	67633722	(66163700)	+	L1PA11	LINE/L1	5	1307	(6848)	467694
34	24.0	2.1	5.6	chr10	67884874	67885014	(65912408)	+	(CGGCGG)n	Simple_repeat	1	144	(0)	468131
20	24.9	1.8	0.0	chr10	67885083	67885139	(65912283)	+	(ACG)n	Simple_repeat	1	58	(0)	468132
21	12.1	0.0	0.0	chr10	69318820	69318855	(64478567)	+	(GAG)n	Simple_repeat	1	36	(0)	471359
468	18.9	2.1	1.0	chr10	69400820	69400915	(64396507)	C	MER47C	DNA/TcMar-Tigger	(0)	97	1	471523
411	29.9	4.2	1.7	chr10	69553028	69553199	(64244223)	C	MIRb	SINE/MIR	(0)	268	69	471833
192	31.6	1.7	0.0	chr10	69553367	69553423	(64243999)	+	L2c	LINE/L2	3101	3158	(229)	471834
2305	23.4	18.2	1.6	chr10	70197139	70198075	(63599347)	+	L1MD2	LINE/L1	21	1140	(5269)	472952
292	34.5	2.0	6.9	chr10	70364968	70365053	(63432369)	C	MER5A	DNA/hAT-Charlie	(0)	189	104	473289
18	17.2	0.0	2.4	chr10	70404143	70404204	(63393218)	+	(GCT)n	Simple_repeat	1	60	(0)	473402
14	21.3	1.8	5.4	chr10	70404189	70404243	(63393179)	+	(CTGAGG)n	Simple_repeat	1	56	(0)	473403
22	15.4	0.0	0.0	chr10	70404220	70404300	(63393122)	+	(GCGGCG)n	Simple_repeat	1	81	(0)	473404
15	15.0	2.4	4.8	chr10	70404332	70404372	(63393050)	+	(GCC)n	Simple_repeat	1	42	(0)	473405
405	31.4	5.1	3.7	chr10	71340882	71341184	(62456238)	C	LTR16D	LTR/ERVL	(72)	496	225	475043
673	24.1	13.5	2.2	chr10	72337536	72337764	(61459658)	C	MIRb	SINE/MIR	(4)	264	6	477065
2178	13.9	1.6	0.0	chr10	72435109	72435411	(61362011)	+	AluJr	SINE/Alu	1	308	(4)	477278
25352	6.4	0.7	0.3	chr10	72435421	72441564	(61355858)	+	L1PA6	LINE/L1	177	6327	(0)	477279
565	12.0	0.0	1.1	chr10	72949114	72949206	(60848216)	+	L1PA10	LINE/L1	6076	6167	(1)	478337
20	12.6	2.9	0.0	chr10	73096009	73096043	(60701379)	+	GA-rich	Low_complexity	1	36	(0)	478601
2147	8.0	10.1	0.4	chr10	73569501	73569776	(60227646)	+	AluSq2	SINE/Alu	2	307	(6)	479532
628	15.6	18.2	0.9	chr10	73569810	73569940	(60227482)	+	FLAM_A	SINE/Alu	1	142	(0)	479533
1592	9.1	0.5	1.4	chr10	73932648	73932856	(59864566)	+	AluSx1	SINE/Alu	88	294	(18)	480195
23754	8.2	1.1	1.9	chr10	74603261	74609701	(59187721)	C	L1PA7	LINE/L1	(1)	6468	1	481471
2195	9.3	1.7	0.7	chr10	75009724	75010012	(58787410)	+	AluSp	SINE/Alu	1	292	(21)	482267
2255	7.9	0.0	2.1	chr10	75180301	75180590	(58616832)	+	AluSx4	SINE/Alu	19	302	(8)	482598
441	19.1	20.1	0.0	chr10	75188145	75188259	(58609163)	C	MER5A	DNA/hAT-Charlie	(19)	170	27	482615
27406	4.0	0.1	0.1	chr10	75558531	75564686	(58232736)	C	L1PA3	LINE/L1	(0)	6155	1	483289
1541	25.9	8.3	1.7	chr10	76337156	76337654	(57459768)	C	L2a	LINE/L2	(0)	3426	2896	484358
1857	17.4	8.6	0.3	chr10	76337655	76337995	(57459427)	C	MER57E1	LTR/ERV1	(0)	372	1	484359
275	34.0	0.9	2.7	chr10	77104721	77104832	(56692590)	+	AmnSINE1	SINE/5S-Deu-L2	8	117	(458)	485352
310	22.3	8.0	1.9	chr10	79116405	79116509	(54680913)	C	L2c	LINE/L2	(175)	3212	3101	489086
1587	21.0	7.4	0.0	chr10	79233277	79233614	(54563808)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	489303
215	27.0	12.8	2.2	chr10	80132308	80132398	(53665024)	+	MIRb	SINE/MIR	46	147	(121)	490723
238	30.0	11.1	2.4	chr10	80856460	80856582	(52940840)	C	L1M6B	LINE/L1	(81)	288	154	491842
2248	11.8	0.3	0.0	chr10	81182650	81182953	(52614469)	+	AluSz	SINE/Alu	1	305	(7)	492265
24410	7.4	1.2	0.8	chr10	83741801	83747326	(50050096)	C	L1P2	LINE/L1	(588)	5566	9	495815
16	0.0	4.3	0.0	chr10	85237971	85237993	(48559429)	+	(CTG)n	Simple_repeat	1	24	(0)	497872
416	32.1	2.6	2.6	chr10	86036281	86036469	(47760953)	+	MamRep605	LTR?	601	789	(60)	498883
17	26.5	1.4	2.7	chr10	86366582	86366621	(47430801)	+	(CCGGCT)n	Simple_repeat	6	46	(0)	499371
30	16.5	0.0	5.3	chr10	86366807	86366881	(47430541)	+	(CCCCT)n	Simple_repeat	1	75	(0)	499372
2338	6.7	22.9	0.0	chr10	86566301	86566658	(47230764)	C	LTR7B	LTR/ERV1	(0)	464	1	499749
5280	8.0	4.3	4.8	chr10	86567031	86567287	(47230135)	C	MER4E1	LTR/ERV1	(0)	781	522	499750
189	32.4	11.2	1.8	chr10	86966554	86966666	(46830756)	C	MIRb	SINE/MIR	(48)	220	96	500485
2097	15.8	0.3	0.0	chr10	87396685	87396994	(46400428)	C	AluJb	SINE/Alu	(1)	311	1	501218
16653	9.9	4.0	0.3	chr10	87525540	87531312	(46266110)	C	L1PA5	LINE/L1	(0)	6154	22	501421
1671	23.0	8.0	6.6	chr10	87595328	87595858	(46201564)	C	MLT1H	LTR/ERVL-MaLR	(8)	541	3	501511
2083	17.2	4.8	2.4	chr10	87892998	87893420	(45904002)	C	Tigger2a	DNA/TcMar-Tigger	(0)	434	1	501968
26012	3.1	0.1	0.1	chr10	90153451	90159478	(43637944)	C	L1PA3	LINE/L1	(0)	6155	125	505456
22	25.9	6.1	2.5	chr10	91220482	91220596	(42576826)	+	(GGC)n	Simple_repeat	1	122	(0)	506997
13	13.0	0.0	9.8	chr10	91220793	91220833	(42576589)	+	(CGG)n	Simple_repeat	1	41	(0)	506998
16	17.8	2.1	4.1	chr10	92689765	92689812	(41107610)	+	G-rich	Low_complexity	1	49	(0)	509676
13	24.7	5.7	2.7	chr10	92689910	92689979	(41107443)	+	(GGAGCGC)n	Simple_repeat	1	74	(0)	509677
18	0.0	0.0	0.0	chr10	92699842	92699861	(41097561)	+	(A)n	Simple_repeat	1	20	(0)	509686
18	21.9	1.6	4.6	chr10	92848404	92848467	(40948955)	+	(CCCCG)n	Simple_repeat	1	65	(0)	510022
12	10.4	6.1	2.9	chr10	92848751	92848783	(40948639)	+	G-rich	Low_complexity	1	35	(0)	510023
33	2.9	0.0	0.0	chr10	92966276	92966310	(40831112)	+	(ATT)n	Simple_repeat	1	35	(0)	510231
7580	2.1	0.0	0.1	chr10	92966313	92967293	(40830129)	C	L1PA3	LINE/L1	(26)	6129	5149	510232
260	19.6	5.5	0.0	chr10	94094378	94094428	(39702994)	C	MER20	DNA/hAT-Charlie	(165)	54	1	512367
254	33.2	7.0	2.9	chr10	94094438	94094642	(39702780)	C	L2c	LINE/L2	(150)	3237	3024	512366
3422	25.5	7.7	1.9	chr10	94207322	94207514	(39589908)	+	L1MC4	LINE/L1	6463	6657	(1385)	512562
22	29.4	1.3	0.0	chr10	94402731	94402759	(39394663)	+	(GGCGGA)n	Simple_repeat	1	73	(0)	512920
2108	16.6	6.6	1.7	chr10	94458057	94458461	(39338961)	+	MSTC	LTR/ERVL-MaLR	1	426	(2)	513022
8315	16.1	9.9	13.6	chr10	94458462	94458505	(39338917)	C	L1MC1	LINE/L1	(4647)	1861	1744	513016
3519	27.6	6.2	2.6	chr10	94663726	94664895	(39132527)	C	L1PA10	LINE/L1	(6848)	1307	93	513403
1469	18.3	0.0	1.7	chr10	94664897	94664916	(39132506)	C	AluJo	SINE/Alu	(9)	303	285	513406
73	1.3	3.8	0.0	chr10	94664917	94664996	(39132426)	+	(TTTC)n	Simple_repeat	1	83	(0)	513407
27337	3.1	0.1	0.1	chr10	94824661	94830681	(38966741)	C	L1PA2	LINE/L1	(5)	6150	125	513555
12	27.7	3.5	1.7	chr10	94830691	94830748	(38966674)	+	(TATTTA)n	Simple_repeat	1	60	(0)	513556
8839	11.5	2.7	2.2	chr10	94830762	94832189	(38965233)	C	L1MA1	LINE/L1	(0)	7721	6291	513557
423	23.1	5.8	2.3	chr10	95457404	95457536	(38339886)	+	MIRb	SINE/MIR	128	265	(3)	514300
6385	10.9	4.3	62.6	chr10	95808721	95810561	(37986861)	C	SVA_B	Retroposon/SVA	(0)	1383	421	514931
21	11.3	0.0	2.5	chr10	96385117	96385160	(37412262)	+	(GAAGAG)n	Simple_repeat	1	42	(0)	515878
400	29.9	6.1	0.0	chr10	96385182	96385309	(37412113)	C	MIR3	SINE/MIR	(52)	156	21	515879
209	26.2	16.3	1.0	chr10	96587309	96587412	(37210010)	+	MIRc	SINE/MIR	84	206	(62)	516222
20	5.5	4.8	4.5	chr10	96832407	96832448	(36964974)	+	(CCG)n	Simple_repeat	1	44	(0)	516802
22	24.1	1.4	2.7	chr10	96832658	96832729	(36964693)	+	(CCTCCC)n	Simple_repeat	1	73	(0)	516803
2251	11.2	1.0	0.0	chr10	97627139	97627442	(36169980)	C	AluSz6	SINE/Alu	(5)	307	1	518377
23787	7.0	1.1	1.1	chr10	98177041	98183177	(35614245)	C	L1PA6	LINE/L1	(10)	6317	174	519509
265	25.5	3.9	4.3	chr10	98352653	98352807	(35444615)	+	L1ME3Cz	LINE/L1	235	335	(662)	519771
229	31.9	9.1	6.1	chr10	98352880	98353059	(35444363)	+	MIRb	SINE/MIR	17	202	(66)	519772
591	29.0	3.3	5.5	chr10	98518316	98518423	(35278999)	+	MIRb	SINE/MIR	47	151	(117)	520055
23441	14.2	2.4	1.0	chr10	98934031	98936599	(34860823)	C	L1PA10	LINE/L1	(3753)	2708	149	520729
399	24.1	0.0	1.2	chr10	98936600	98936683	(34860739)	+	MER58B	DNA/hAT-Charlie	223	305	(36)	520731
26632	4.9	0.1	0.4	chr10	100406331	100412500	(33384922)	+	L1PA4	LINE/L1	1	6153	(2)	523297
20	18.1	3.3	3.2	chr10	102120184	102120243	(31677179)	+	(GCCGCC)n	Simple_repeat	1	62	(0)	526329
29	5.6	0.0	0.0	chr10	102120365	102120401	(31677021)	+	(GTGTGTGC)n	Simple_repeat	1	37	(0)	526330
16	24.3	2.7	5.2	chr10	102120412	102120486	(31676936)	+	(CGCTCC)n	Simple_repeat	1	77	(0)	526331
33	8.9	0.0	2.0	chr10	102432858	102432908	(31364514)	+	(TC)n	Simple_repeat	1	51	(0)	526899
2556	7.1	0.0	0.0	chr10	102432914	102433224	(31364198)	C	AluSx3	SINE/Alu	(0)	311	1	526900
12	15.3	3.5	0.0	chr10	102642298	102642326	(31155096)	+	(CGCCC)n	Simple_repeat	1	30	(0)	527306
20	6.7	0.0	3.0	chr10	102714290	102714322	(31083100)	+	(CCT)n	Simple_repeat	1	33	(0)	527438
12	26.1	0.0	4.1	chr10	103966960	103967008	(29830414)	+	(CACCCCG)n	Simple_repeat	1	49	(0)	529996
4001	6.5	1.9	3.2	chr10	104251596	104252123	(29545299)	+	MER41C	LTR/ERV1	1	521	(0)	530418
635	23.4	3.8	7.0	chr10	104252124	104252226	(29545196)	C	MIR	SINE/MIR	(91)	171	73	530417
16	12.7	0.0	5.3	chr10	104254573	104254610	(29542812)	+	(GGTCAG)n	Simple_repeat	1	38	(0)	530422
14876	17.1	2.3	4.0	chr10	108783322	108786841	(25010581)	+	HUERS-P3-int	LTR/ERV1	22	3435	(5484)	537088
5542	17.3	10.1	11.1	chr10	109662998	109664886	(24132536)	+	MER52D	LTR/ERV1	1	2098	(25)	538253
4836	8.4	0.3	0.0	chr10	110470528	110471171	(23326251)	C	L1PA6	LINE/L1	(5534)	650	5	539574
1139	13.5	1.1	0.0	chr10	112103747	112103924	(21693498)	C	MER50B	LTR/ERV1	(0)	697	518	542151
27884	3.1	0.1	0.3	chr10	112103926	112109951	(21687471)	+	L1PA3	LINE/L1	124	6145	(10)	542152
15	21.8	0.0	0.0	chr10	114821988	114822024	(18975398)	+	(GCG)n	Simple_repeat	1	37	(0)	546602
2267	19.0	2.5	0.0	chr10	115111333	115111753	(18685669)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	547092
452	31.8	8.3	0.0	chr10	115111755	115111930	(18685492)	C	LTR79	LTR/ERVL	(62)	465	274	547093
27607	2.9	0.1	0.2	chr10	115362337	115368543	(18428879)	C	L1PA2	LINE/L1	(3)	6288	131	547365
1251	20.7	2.4	8.2	chr10	115368545	115368716	(18428706)	C	L1MA7	LINE/L1	(184)	7526	7359	547366
199	30.6	15.0	3.8	chr10	116772064	116772352	(17025070)	C	L2	LINE/L2	(897)	2522	2196	549338
769	26.5	3.6	0.0	chr10	116865613	116865823	(16931599)	+	MER20	DNA/hAT-Charlie	1	219	(0)	549509
557	23.5	16.2	2.2	chr10	116865883	116866104	(16931318)	C	MIR	SINE/MIR	(2)	260	2	549510
2317	21.0	2.7	4.9	chr10	117194187	117194373	(16603049)	+	ERV3-16A3_I-int	LTR/ERVL	4574	4760	(466)	550041
2443	10.7	2.7	2.1	chr10	117194374	117194746	(16602676)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	550042
577	32.8	4.6	2.2	chr10	117772703	117772976	(16024446)	+	L4_A_Mam	LINE/RTE-X	4590	4870	(120)	551052
702	30.9	14.0	3.6	chr10	117773000	117773472	(16023950)	+	LTR105_Mam	LTR/ERVL	16	545	(55)	551054
12	24.2	3.5	3.4	chr10	118046682	118046695	(15750727)	+	(CTCCCT)n	Simple_repeat	1	57	(0)	551476
17	11.8	2.4	4.8	chr10	118046696	118046736	(15750686)	+	(CCT)n	Simple_repeat	1	42	(0)	551477
193	18.6	18.9	1.1	chr10	118047180	118047266	(15750156)	+	L2b	LINE/L2	3266	3371	(4)	551478
234	33.3	7.2	6.2	chr10	118193912	118194007	(15603415)	C	MIR3	SINE/MIR	(52)	156	60	551692
23844	10.3	1.7	3.1	chr10	118646331	118652742	(15144680)	C	L1PA7	LINE/L1	(0)	6469	1	552389
1818	14.2	6.2	6.4	chr10	118825836	118826226	(14971196)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	552678
10078	3.6	1.2	10.5	chr10	118894963	118896427	(14900995)	+	SVA_C	Retroposon/SVA	57	1383	(1)	552799
255	26.8	2.7	0.0	chr10	119222108	119222178	(14575244)	C	MIRc	SINE/MIR	(110)	158	86	553487
373	28.9	8.0	0.7	chr10	119222258	119222407	(14575015)	+	MER91B	DNA/hAT-Tip100	28	189	(1)	553488
2303	13.0	2.8	5.1	chr10	119390718	119390883	(14406539)	C	THE1B	LTR/ERVL-MaLR	(202)	162	1	553824
382	23.4	10.8	0.0	chr10	119391400	119391523	(14405899)	C	LTR33	LTR/ERVL	(1)	514	376	553826
357	33.8	5.8	0.0	chr10	119454236	119454380	(14343042)	+	MIRb	SINE/MIR	22	175	(93)	553916
430	32.6	6.6	0.0	chr10	119454548	119454731	(14342691)	C	MIR	SINE/MIR	(51)	211	15	553917
228	28.8	2.9	0.0	chr10	120185092	120185157	(13612265)	C	MLT1O	LTR/ERVL-MaLR	(412)	130	63	555263
540	23.9	0.8	0.0	chr10	120185265	120185381	(13612041)	+	MER5A	DNA/hAT-Charlie	4	121	(68)	555264
274	23.3	13.1	1.2	chr10	120850917	120851017	(12946405)	+	L2a	LINE/L2	3272	3407	(19)	556296
956	18.8	9.1	7.1	chr10	120910670	120910950	(12886472)	C	MLT1A	LTR/ERVL-MaLR	(2)	455	83	556359
28302	2.3	0.1	0.0	chr10	120910960	120916983	(12880439)	+	L1PA3	LINE/L1	124	6154	(1)	556360
18	12.0	0.0	0.0	chr10	121927328	121927354	(11870068)	+	(T)n	Simple_repeat	1	27	(0)	557958
4392	15.7	0.4	1.3	chr10	121988760	121989476	(11807946)	+	MER50	LTR/ERV1	1	711	(23)	558090
13	14.0	4.7	4.4	chr10	122374765	122374807	(11422615)	+	(GCCGCG)n	Simple_repeat	1	45	(0)	558776
211	20.3	7.5	0.0	chr10	122375444	122375517	(11421905)	C	MIRc	SINE/MIR	(159)	109	30	558777
594	32.6	3.9	1.8	chr10	122484604	122484828	(11312594)	C	MIRb	SINE/MIR	(30)	238	9	558951
228	30.1	8.8	2.4	chr10	122701501	122701670	(11095752)	+	L1ME4c	LINE/L1	536	717	(113)	559217
39	0.0	0.0	0.0	chr10	122980724	122980759	(10816663)	+	(GCGGG)n	Simple_repeat	1	36	(0)	559574
1168	16.8	2.3	0.9	chr10	123037025	123037240	(10760182)	+	MER20	DNA/hAT-Charlie	1	219	(0)	559669
285	27.6	9.5	3.6	chr10	123037250	123037474	(10759948)	+	L1ME4b	LINE/L1	548	786	(106)	559670
2078	9.0	0.0	0.8	chr10	123281747	123282012	(10515410)	+	AluSz	SINE/Alu	1	264	(48)	560062
287	28.9	12.4	1.7	chr10	124152988	124153122	(9644300)	C	MIRb	SINE/MIR	(72)	196	46	561445
563	35.0	0.9	0.2	chr10	124153530	124155709	(9641713)	+	(CA)n	Simple_repeat	1	2199	(0)	561446
263	24.5	3.8	6.4	chr10	124387532	124387640	(9409782)	C	MIRb	SINE/MIR	(117)	151	46	561809
801	25.1	7.5	7.7	chr10	124387739	124388058	(9409364)	+	MER39	LTR/ERV1	1	537	(170)	561810
17	13.8	5.0	0.0	chr10	124791785	124791824	(9005598)	+	(ACCGCC)n	Simple_repeat	1	42	(0)	562470
1905	16.2	0.0	0.7	chr10	125577215	125577523	(8219899)	+	AluSz6	SINE/Alu	1	307	(5)	563720
403	27.9	2.9	5.2	chr10	125577552	125577763	(8219659)	C	L1ME4c	LINE/L1	(33)	797	591	563721
25158	6.7	1.2	0.2	chr10	125647552	125653649	(8143773)	+	L1PA5	LINE/L1	5	6154	(0)	563834
16	22.7	0.0	0.0	chr10	125896669	125896709	(7900713)	+	G-rich	Low_complexity	1	41	(0)	564165
8965	5.6	11.1	1.5	chr10	125969623	125970870	(7826552)	C	SVA_B	Retroposon/SVA	(0)	1383	1	564291
2146	9.3	0.0	0.0	chr10	127923399	127923666	(5873756)	C	AluSg	SINE/Alu	(7)	303	36	566814
199	37.5	3.5	1.4	chr10	128013980	128014117	(5783305)	+	MIRb	SINE/MIR	41	181	(87)	566921
195	35.9	9.7	0.5	chr10	128816599	128816805	(4980617)	C	L2c	LINE/L2	(0)	3387	3160	567855
18	16.0	1.8	7.0	chr10	129609759	129609814	(4187608)	+	GA-rich	Low_complexity	1	57	(0)	568663
26661	2.9	0.1	0.1	chr10	129732561	129738580	(4058842)	C	L1PA3	LINE/L1	(4)	6151	125	568755
16630	8.0	1.9	2.9	chr10	130152319	130154468	(3642954)	C	L1P2	LINE/L1	(4039)	2145	5	569187
17	17.2	0.0	2.4	chr10	130792220	130792260	(3005162)	+	(CCTC)n	Simple_repeat	1	41	(0)	569894
6379	9.1	2.2	0.1	chr10	131581269	131582109	(2215313)	C	L1P2	LINE/L1	(5325)	859	1	570713
664	25.7	0.7	0.0	chr10	131869179	131869330	(1928092)	C	MER3	DNA/hAT-Charlie	(43)	166	14	571024
2211	10.1	1.7	0.3	chr10	132008418	132008713	(1788709)	+	AluSg	SINE/Alu	1	300	(10)	571208
8088	15.4	4.9	0.7	chr10	132008714	132009666	(1787756)	+	MER51-int	LTR/ERV1	507	1491	(6325)	571206
282	22.9	7.8	2.4	chr10	132058747	132058831	(1738591)	C	Tigger5b	DNA/TcMar-Tigger	(0)	472	383	571294
1708	14.2	18.4	3.8	chr10	132313068	132313324	(1484098)	+	MER49	LTR/ERV1	86	386	(537)	571506
336	36.7	8.5	3.8	chr10	132313396	132313822	(1483600)	C	L2b	LINE/L2	(11)	3364	2916	571508
1606	9.3	2.7	0.5	chr10	132321548	132321761	(1475661)	+	AluSx1	SINE/Alu	1	219	(93)	571525
727	28.9	4.8	5.7	chr10	132321767	132322530	(1474892)	C	L1ME3F	LINE/L1	(418)	5825	5039	571526
669	29.3	5.4	3.9	chr10	132905381	132905710	(891712)	C	HAL1	LINE/L1	(699)	1808	1474	572034
1995	8.2	8.2	0.0	chr10	133341425	133341693	(455729)	C	AluSc	SINE/Alu	(15)	294	2	572410
897	22.5	5.2	7.0	chr10	133341694	133341738	(455684)	C	L1M5	LINE/L1	(692)	5492	5463	572409
1631	17.6	4.7	4.7	chr10	133341743	133342124	(455298)	C	MLT1B	LTR/ERVL-MaLR	(8)	382	1	572411
200	9.8	7.3	3.8	chr10	133445725	133445777	(351645)	C	L2	LINE/L2	(801)	2618	2564	572529
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
363	32.2	7.2	1.3	chr11	300294	300529	(134786093)	+	L2	LINE/L2	2296	2546	(873)	573218
464	11.2	4.9	2.5	chr11	316555	316634	(134769988)	+	AluSz6	SINE/Alu	208	289	(23)	573240
11	21.0	2.5	2.4	chr11	375408	375447	(134711175)	+	(CCCTGA)n	Simple_repeat	1	41	(0)	573340
16	18.3	0.0	6.1	chr11	400482	400530	(134686092)	+	(GCCCCC)n	Simple_repeat	1	49	(0)	573354
408	22.8	3.1	2.3	chr11	493198	493326	(134593296)	C	L1MC3	LINE/L1	(958)	6827	6715	573455
1520	16.2	9.8	0.0	chr11	493661	493919	(134592703)	+	AluJb	SINE/Alu	2	288	(24)	573457
52	3.7	0.0	0.0	chr11	494139	494194	(134592428)	+	(GCTGG)n	Simple_repeat	1	56	(0)	573458
19	26.1	2.1	5.2	chr11	506892	506986	(134579636)	+	(CGCCC)n	Simple_repeat	1	97	(0)	573470
8770	8.0	3.4	1.4	chr11	516842	518179	(134568443)	+	SVA_A	Retroposon/SVA	20	1385	(2)	573497
936	9.4	3.0	0.0	chr11	518496	518622	(134568000)	C	AluSx3	SINE/Alu	(180)	131	1	573499
251	13.3	2.2	0.0	chr11	696404	696448	(134390174)	C	MER41A	LTR/ERV1	(114)	440	395	573783
1675	15.6	5.3	1.0	chr11	696497	696784	(134389838)	+	AluJr	SINE/Alu	1	301	(11)	573784
30	0.0	0.0	3.0	chr11	832893	832925	(134253697)	+	(CGGGG)n	Simple_repeat	1	33	(0)	574001
18	13.3	0.0	0.0	chr11	832968	833000	(134253622)	+	(GCC)n	Simple_repeat	1	33	(0)	574002
269	27.4	17.0	0.0	chr11	873649	873855	(134212767)	+	L1MB5	LINE/L1	5927	6174	(0)	574038
332	28.5	6.5	1.2	chr11	873835	873994	(134212628)	+	L1MEh	LINE/L1	1233	1401	(834)	574039
2322	9.4	0.0	0.3	chr11	874180	874476	(134212146)	+	AluSq2	SINE/Alu	1	296	(17)	574040
22	13.2	10.3	1.3	chr11	925798	925865	(134160757)	+	(CGTG)n	Simple_repeat	1	75	(0)	574110
37	26.7	3.7	5.3	chr11	926095	926311	(134160311)	+	G-rich	Low_complexity	1	225	(0)	574111
6633	21.0	5.6	3.5	chr11	1143085	1144553	(133942069)	+	L1MDa	LINE/L1	3369	4876	(1661)	574360
14	15.6	0.0	0.0	chr11	1574548	1574576	(133512046)	+	(CAGCT)n	Simple_repeat	1	29	(0)	574747
13	28.9	1.8	1.7	chr11	1574766	1574822	(133511800)	+	G-rich	Low_complexity	1	58	(0)	574748
468	29.3	7.5	9.5	chr11	1680720	1680890	(133405732)	+	L1MD2	LINE/L1	4597	4774	(1372)	574931
793	16.9	0.8	0.0	chr11	1680891	1681020	(133405602)	+	FLAM_C	SINE/Alu	5	135	(8)	574932
468	29.3	7.5	9.5	chr11	1681021	1681259	(133405363)	+	L1MD2	LINE/L1	4775	4998	(1148)	574931
1099	21.0	1.9	0.0	chr11	2006647	2006898	(133079724)	+	MLT1B	LTR/ERVL-MaLR	128	384	(6)	575320
13	19.1	0.0	6.4	chr11	2007017	2007063	(133079559)	+	(GGCCCTG)n	Simple_repeat	1	47	(0)	575321
789	30.6	4.9	2.8	chr11	2007137	2007533	(133079089)	C	MLT1C	LTR/ERVL-MaLR	(9)	458	53	575322
2176	24.4	7.4	4.5	chr11	2076955	2078250	(133008372)	C	L1ME2	LINE/L1	(3)	6334	4996	575405
2091	29.4	3.5	3.0	chr11	2087954	2088245	(132998377)	+	L1MB3	LINE/L1	5892	6182	(1)	575418
498	26.1	6.8	0.0	chr11	2088508	2088645	(132997977)	+	MER58A	DNA/hAT-Charlie	35	182	(42)	575421
320	27.6	7.9	2.5	chr11	2366110	2366228	(132720394)	C	L2a	LINE/L2	(2)	3424	3299	575734
12	0.0	4.3	4.2	chr11	2366302	2366324	(132720298)	+	(CCCA)n	Simple_repeat	1	24	(0)	575735
16	18.9	0.0	0.0	chr11	2907671	2907706	(132178916)	+	G-rich	Low_complexity	1	36	(0)	576307
1386	13.8	4.8	0.0	chr11	3731746	3731962	(131354660)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	9	577553
1263	10.8	0.0	0.6	chr11	3732098	3732255	(131354367)	+	AluSz6	SINE/Alu	134	290	(22)	577554
464	28.3	6.2	13.4	chr11	4185204	4185464	(130901158)	C	L2b	LINE/L2	(2)	3373	3133	578487
498	28.6	9.3	0.0	chr11	4185486	4185670	(130900952)	C	MIRb	SINE/MIR	(41)	227	24	578494
19	22.6	3.2	6.2	chr11	7673572	7673664	(127412958)	+	(GCCTCCG)n	Simple_repeat	1	96	(0)	582935
24214	7.3	0.2	0.2	chr11	8489949	8496103	(126590519)	+	L1PA6	LINE/L1	178	6320	(7)	584044
31	7.2	2.3	0.0	chr11	8870482	8870525	(126216097)	+	(GT)n	Simple_repeat	1	45	(0)	584651
15	27.3	3.2	1.5	chr11	8871239	8871301	(126215321)	+	GA-rich	Low_complexity	1	65	(0)	584652
1460	18.6	3.8	5.4	chr11	9434520	9434814	(125651808)	+	AluJr4	SINE/Alu	1	290	(22)	585795
1753	17.0	2.7	0.0	chr11	9513616	9513903	(125572719)	+	AluSz	SINE/Alu	3	298	(14)	585979
20151	8.1	0.1	1.5	chr11	10173148	10179353	(124907269)	+	L1PA3	LINE/L1	125	6151	(4)	587140
22134	8.8	1.1	1.6	chr11	10420214	10426545	(124660077)	C	L1PA7	LINE/L1	(14)	6455	1	587538
291	25.6	4.4	0.0	chr11	10426550	10426635	(124659987)	C	Charlie9	DNA/hAT-Charlie	(2667)	90	1	587536
252	29.9	6.1	0.0	chr11	10715359	10715435	(124371187)	+	L2	LINE/L2	2729	2810	(609)	588001
24219	6.8	0.7	0.4	chr11	11691545	11694642	(123391980)	+	L1P2	LINE/L1	1	3085	(3061)	589591
11293	9.9	1.3	1.2	chr11	12039973	12040999	(123045623)	C	THE1B-int	LTR/ERVL-MaLR	(28)	1552	532	590113
2207	7.1	0.3	2.9	chr11	12268709	12269016	(122817606)	+	AluY	SINE/Alu	1	300	(11)	590536
19	8.8	2.6	2.6	chr11	12674114	12674151	(122412471)	+	(CCGCC)n	Simple_repeat	1	39	(0)	591159
27	13.7	3.7	6.0	chr11	12674441	12674521	(122412101)	+	(CGCCG)n	Simple_repeat	1	84	(0)	591160
15	17.7	6.7	0.0	chr11	12674718	12674770	(122411852)	+	G-rich	Low_complexity	1	56	(0)	591161
21947	7.4	1.6	0.1	chr11	13569851	13575921	(121510701)	+	L1PA6	LINE/L1	7	6154	(0)	592546
395	36.1	1.4	3.2	chr11	13871537	13871756	(121214866)	+	L2	LINE/L2	2170	2385	(1034)	592952
1897	16.1	0.3	0.7	chr11	13871757	13872055	(121214567)	C	AluSz6	SINE/Alu	(10)	302	5	592953
259	33.2	15.6	2.5	chr11	13889341	13889624	(121196998)	+	LTR104_Mam	LTR/Gypsy	589	916	(593)	592987
23521	10.1	1.9	4.6	chr11	13990408	13993017	(121093605)	C	L1PA7	LINE/L1	(3831)	2630	1	593146
6678	20.2	9.2	1.3	chr11	14335604	14337092	(120749530)	+	L1MDa	LINE/L1	19	1879	(4754)	593706
11	31.1	0.0	0.0	chr11	14358618	14358661	(120727961)	+	(CGCCCC)n	Simple_repeat	1	44	(0)	593747
15	22.1	4.9	3.1	chr11	14358682	14358742	(120727880)	+	(CGC)n	Simple_repeat	1	64	(0)	593748
1885	18.4	10.4	2.8	chr11	14989505	14993518	(120093104)	+	SATR1	Satellite	1	4320	(0)	594793
21919	8.3	0.3	0.5	chr11	14993519	14998320	(120088302)	+	L1PA7	LINE/L1	1372	6153	(1)	594794
184	37.1	4.7	2.7	chr11	15584852	15584998	(119501624)	C	MIR3	SINE/MIR	(23)	185	36	595748
14	21.5	4.0	1.9	chr11	15585615	15585664	(119500958)	+	(AATG)n	Simple_repeat	1	52	(0)	595750
319	26.7	15.2	3.1	chr11	15585710	15585941	(119500681)	+	L2b	LINE/L2	3112	3387	(0)	595751
31	3.3	0.0	0.0	chr11	15585948	15585978	(119500644)	+	(AC)n	Simple_repeat	1	31	(0)	595752
200	33.0	11.2	8.0	chr11	15872628	15872835	(119213787)	+	L3	LINE/CR1	3664	3886	(213)	596268
1144	22.9	11.3	1.8	chr11	15872836	15873169	(119213453)	+	MLT1A	LTR/ERVL-MaLR	4	373	(1)	596269
200	33.0	11.2	8.0	chr11	15873170	15873346	(119213276)	+	L3	LINE/CR1	3887	4063	(36)	596268
13853	15.7	1.2	1.1	chr11	16070534	16074554	(119012068)	+	L1PA15	LINE/L1	2	4125	(2548)	596553
17378	15.1	4.2	2.4	chr11	16253364	16258820	(118827802)	+	L1MC1	LINE/L1	844	6433	(75)	596783
21566	14.1	2.8	2.0	chr11	17039884	17040365	(118046257)	+	L1M1	LINE/L1	3176	3656	(3909)	597931
2171	17.5	8.4	4.2	chr11	17040368	17043536	(118043086)	C	SATR1	Satellite	(45)	3974	300	597935
2284	16.9	2.4	2.8	chr11	17053377	17058919	(118027703)	C	SATR2	Satellite	(0)	5524	1	597952
14858	9.0	3.2	3.0	chr11	17058921	17059067	(118027555)	+	L1M1	LINE/L1	2242	2392	(3754)	597953
2223	12.5	0.0	0.6	chr11	17059068	17059379	(118027243)	+	AluSx	SINE/Alu	3	312	(0)	597954
2220	11.2	0.0	0.7	chr11	17068359	17068661	(118017961)	C	AluSz	SINE/Alu	(1)	311	11	597978
393	21.3	4.1	0.0	chr11	17068712	17068805	(118017817)	+	MIR	SINE/MIR	101	198	(64)	597979
30298	19.9	2.3	3.8	chr11	17370374	17376380	(117710242)	+	HUERS-P3-int	LTR/ERV1	1	5912	(3007)	598650
288	25.4	1.4	2.9	chr11	17692824	17692908	(117393714)	C	L2a	LINE/L2	(0)	3426	3288	599155
1910	19.1	18.8	0.2	chr11	17692917	17693372	(117393250)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	599156
22533	10.0	2.1	2.2	chr11	18891922	18897998	(116188624)	C	L1PA7	LINE/L1	(327)	6142	1	601375
21476	10.1	1.8	2.9	chr11	18898003	18900116	(116186506)	+	L1PA8	LINE/L1	1878	3957	(2189)	601376
226	21.1	11.9	7.1	chr11	19094453	19094564	(115992058)	C	L1ME4a	LINE/L1	(5)	6119	6002	601597
769	28.6	2.9	0.0	chr11	19116660	19116858	(115969764)	C	MIR	SINE/MIR	(3)	259	55	601651
14	25.3	0.0	0.0	chr11	19116935	19116976	(115969646)	+	G-rich	Low_complexity	1	42	(0)	601652
10825	13.2	0.5	0.6	chr11	26823240	26824871	(108261751)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	613016
226	32.2	11.3	0.8	chr11	26914455	26914573	(108172049)	+	LTR88b	LTR/Gypsy?	238	370	(467)	613138
410	30.2	3.2	2.0	chr11	26914806	26914957	(108171665)	+	MER5A	DNA/hAT-Charlie	36	189	(0)	613139
7298	16.8	14.9	6.0	chr11	27304507	27306094	(107780528)	+	MER52A	LTR/ERV1	2	1755	(0)	613754
2989	13.1	6.8	1.3	chr11	28020105	28020575	(107066047)	+	MER1A	DNA/hAT-Charlie	31	529	(0)	614946
24656	5.3	0.2	0.6	chr11	30178431	30184610	(104902012)	+	L1PA4	LINE/L1	4	6155	(0)	618070
22	24.3	3.1	0.0	chr11	31819379	31819443	(103267179)	+	G-rich	Low_complexity	1	67	(0)	620448
724	29.1	12.6	8.9	chr11	32209098	32209523	(102877099)	+	MLT1J	LTR/ERVL-MaLR	1	508	(4)	621187
462	34.0	6.0	2.2	chr11	32209542	32209918	(102876704)	+	L2	LINE/L2	1416	1800	(1619)	621188
29	0.0	3.2	0.0	chr11	32209919	32209949	(102876673)	+	(TAA)n	Simple_repeat	1	32	(0)	621189
462	34.0	6.0	2.2	chr11	32209950	32209971	(102876651)	+	L2	LINE/L2	1801	1831	(1588)	621188
2371	9.0	0.0	0.6	chr11	32366017	32366328	(102720294)	C	AluY	SINE/Alu	(1)	310	1	621480
2131	15.2	5.2	0.5	chr11	32399187	32399452	(102687170)	+	L1MC2	LINE/L1	5964	6232	(112)	621532
214	29.1	0.0	5.2	chr11	32399471	32399528	(102687094)	+	MIRb	SINE/MIR	203	257	(11)	621534
17413	10.2	4.8	0.5	chr11	32762629	32768484	(102318138)	+	L1PA5	LINE/L1	2	6154	(0)	622162
21945	2.8	0.1	0.0	chr11	32941251	32947256	(102139366)	C	L1PA3	LINE/L1	(18)	6137	124	622517
686	27.0	15.9	2.4	chr11	34483024	34483444	(100603178)	+	L2a	LINE/L2	2916	3404	(22)	625344
511	18.1	3.5	0.4	chr11	34483458	34484544	(100602078)	+	(ACTAT)n	Simple_repeat	1	1125	(0)	625345
18	17.4	1.8	5.2	chr11	35618655	35618711	(99467911)	+	(GGCGCT)n	Simple_repeat	1	58	(0)	627050
13	19.2	6.9	5.2	chr11	35618744	35618815	(99467807)	+	(GCCCGAC)n	Simple_repeat	1	77	(0)	627051
15	16.1	1.7	8.5	chr11	35618780	35618837	(99467785)	+	(GCGCCC)n	Simple_repeat	1	59	(0)	627052
8138	13.9	5.3	2.9	chr11	35718415	35720906	(99365716)	C	L1MC1	LINE/L1	(5)	6328	3787	627220
6693	16.7	2.6	3.0	chr11	36665932	36667226	(98419396)	+	HUERS-P3b-int	LTR/ERV1	409	1877	(5541)	628759
507	28.4	9.7	11.4	chr11	40645339	40646148	(94440474)	+	LTR50	LTR/ERVL	1	795	(0)	634236
12	21.9	3.9	3.8	chr11	43943176	43943226	(91143396)	+	(GCA)n	Simple_repeat	1	53	(0)	639241
196	25.8	5.3	11.9	chr11	44463840	44463940	(90622682)	+	L2a	LINE/L2	3322	3415	(11)	640163
35	20.8	2.5	4.8	chr11	45146945	45147065	(89939557)	+	G-rich	Low_complexity	1	124	(0)	641573
12	16.3	2.8	2.7	chr11	45147136	45147171	(89939451)	+	(CTCCTCG)n	Simple_repeat	1	37	(0)	641574
13	13.5	6.1	0.0	chr11	45147283	45147315	(89939307)	+	(GACGCG)n	Simple_repeat	1	35	(0)	641575
2357	7.9	0.0	0.3	chr11	45808218	45808508	(89278114)	+	AluSx	SINE/Alu	1	290	(22)	642817
16	0.0	0.0	0.0	chr11	46617337	46617354	(88469268)	+	(TC)n	Simple_repeat	1	18	(0)	644307
19	14.4	5.3	3.3	chr11	46918068	46918124	(88168498)	+	(CCCGGA)n	Simple_repeat	1	60	(0)	644902
13	21.3	4.5	5.7	chr11	46918203	46918269	(88168353)	+	G-rich	Low_complexity	1	70	(0)	644903
1844	15.7	4.5	0.7	chr11	47196868	47197166	(87889456)	+	AluJb	SINE/Alu	1	311	(1)	645424
2036	18.5	6.7	14.1	chr11	47197167	47197219	(87889403)	C	MER34A	LTR/ERV1	(72)	499	479	645422
2247	10.8	0.0	0.0	chr11	47197220	47197514	(87889108)	C	AluSc8	SINE/Alu	(16)	295	1	645425
666	26.9	8.8	0.6	chr11	47351578	47351776	(87734846)	C	MIRb	SINE/MIR	(40)	228	18	645719
12	19.3	0.0	5.1	chr11	47565815	47565853	(87520769)	+	(CCCCGT)n	Simple_repeat	1	39	(0)	646186
5772	9.4	1.8	31.6	chr11	47892272	47893747	(87192875)	+	SVA_B	Retroposon/SVA	9	1045	(339)	647018
14610	16.2	8.2	8.0	chr11	49740152	49741730	(85344892)	C	HUERS-P3b-int	LTR/ERV1	(472)	2796	1059	649492
27	0.0	0.0	0.0	chr11	49741731	49741756	(85344866)	+	(AAAAC)n	Simple_repeat	1	26	(0)	649494
11332	19.2	13.7	14.2	chr11	49741757	49742857	(85343765)	C	HUERS-P3b-int	LTR/ERV1	(6360)	1058	5	649492
2498	6.9	0.0	0.0	chr11	50297644	50297932	(84788690)	C	AluSg7	SINE/Alu	(20)	289	1	650289
380	30.8	5.7	8.7	chr11	57315772	57316208	(77770414)	+	L2-3_Crp	LINE/L2	458	880	(1216)	653449
1872	28.6	11.8	0.9	chr11	57316284	57317121	(77769501)	+	L2a	LINE/L2	2238	3167	(259)	653448
317	27.3	3.3	1.1	chr11	57426723	57426811	(77659811)	C	MIRb	SINE/MIR	(95)	173	83	653671
632	2.7	0.0	0.0	chr11	59556429	59556501	(75530121)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	656960
1906	13.8	0.3	0.7	chr11	59753729	59754010	(75332612)	+	AluJb	SINE/Alu	1	281	(31)	657375
37	0.0	0.0	0.0	chr11	59754014	59754047	(75332575)	+	(AAAC)n	Simple_repeat	1	34	(0)	657376
27584	2.7	0.1	0.0	chr11	60435418	60441441	(74645181)	+	L1PA2	LINE/L1	124	6155	(0)	658362
767	12.4	0.8	0.0	chr11	61726627	61726747	(73359875)	C	MIR3	SINE/MIR	(25)	183	62	660757
11	34.9	1.4	1.4	chr11	62601572	62601641	(72484981)	+	(CCGCCG)n	Simple_repeat	1	71	(0)	662388
2176	14.4	4.9	0.5	chr11	63024344	63024756	(72061866)	+	L1MB4	LINE/L1	5748	6179	(1)	663332
20	8.1	2.3	4.5	chr11	63671527	63671569	(71415053)	+	(CGAGG)n	Simple_repeat	1	44	(0)	664137
27	23.1	3.4	2.2	chr11	63764004	63764092	(71322530)	+	(CTC)n	Simple_repeat	1	92	(0)	664334
1636	30.3	3.7	5.3	chr11	64431713	64432104	(70654518)	C	L1MC5a	LINE/L1	(420)	2357	1985	665609
572	26.3	5.3	10.0	chr11	64432105	64432688	(70653934)	+	MLT1F	LTR/ERVL-MaLR	3	568	(23)	665611
14	29.6	0.0	0.0	chr11	64622796	64622841	(70463781)	+	(GTG)n	Simple_repeat	1	46	(0)	665954
13	12.1	3.6	0.0	chr11	65334301	65334328	(69752294)	+	(CCGTC)n	Simple_repeat	1	29	(0)	667347
512	18.1	5.6	2.0	chr11	65468773	65468920	(69617702)	+	L1MD1	LINE/L1	7725	7840	(42)	667587
13	12.1	0.0	3.5	chr11	65469175	65469203	(69617419)	+	(TTTGG)n	Simple_repeat	1	29	(0)	667597
1291	12.3	2.7	21.9	chr11	65469206	65469374	(69617248)	C	AluJo	SINE/Alu	(11)	301	136	667598
26	0.0	0.0	0.0	chr11	65833561	65833585	(69253037)	+	(CTTCCC)n	Simple_repeat	1	25	(0)	668265
401	24.2	0.8	0.6	chr11	65834174	65835146	(69251476)	+	(GT)n	Simple_repeat	1	981	(0)	668266
15	13.9	0.0	0.0	chr11	66049201	66049224	(69037398)	+	(C)n	Simple_repeat	1	24	(0)	668728
13	32.8	2.3	3.4	chr11	66049235	66049272	(69037350)	+	GA-rich	Low_complexity	1	85	(0)	668729
15	22.1	0.0	2.3	chr11	66882619	66882662	(68203960)	+	(CCCCAG)n	Simple_repeat	1	44	(0)	670412
184	29.6	0.0	0.0	chr11	67312788	67312841	(67773781)	+	L2a	LINE/L2	3348	3401	(25)	671384
2092	12.1	3.3	0.0	chr11	67403418	67403707	(67682915)	+	AluSx	SINE/Alu	3	302	(10)	671580
16	7.8	0.0	3.5	chr11	67403913	67403941	(67682681)	+	(GAG)n	Simple_repeat	1	29	(0)	671581
304	24.3	0.0	0.9	chr11	67629552	67629665	(67456957)	C	MIRc	SINE/MIR	(71)	191	86	671999
17	24.9	3.7	3.6	chr11	67629812	67629892	(67456730)	+	(CCGCGG)n	Simple_repeat	1	84	(0)	672000
12	20.8	3.1	7.6	chr11	67711741	67711804	(67374818)	+	G-rich	Low_complexity	1	66	(0)	672131
12	27.4	2.0	2.0	chr11	67711803	67711852	(67374770)	+	(CCT)n	Simple_repeat	1	51	(0)	672132
1909	17.1	1.9	6.5	chr11	67731221	67735527	(67351095)	+	SATR2	Satellite	1	4110	(45)	672154
1903	21.4	9.0	0.7	chr11	67982899	67983971	(67102651)	+	SATR1	Satellite	1	1162	(1)	672562
1804	19.3	8.8	0.3	chr11	67984001	67985095	(67101527)	+	SATR1	Satellite	1	1188	(46)	672562
301	32.4	2.8	0.0	chr11	68383487	68383591	(66703031)	C	MIR3	SINE/MIR	(20)	188	81	673310
12	7.4	3.1	6.1	chr11	68384039	68384070	(66702552)	+	(CTGCCT)n	Simple_repeat	1	33	(0)	673311
6446	12.1	14.9	1.9	chr11	68930587	68931695	(66154927)	C	MER52C	LTR/ERV1	(0)	1278	1	674248
275	31.2	18.1	0.5	chr11	69093885	69094071	(65992551)	C	L2	LINE/L2	(1477)	1942	1716	674510
1743	20.3	5.3	2.1	chr11	69142607	69142989	(65943633)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	285	674589
229	14.3	0.0	2.3	chr11	69143013	69143055	(65943567)	C	MLT1E1A	LTR/ERVL-MaLR	(540)	140	99	674589
414	30.0	3.0	0.0	chr11	69143057	69143186	(65943436)	+	MLT1I	LTR/ERVL-MaLR	90	223	(188)	674590
657	27.3	2.3	0.5	chr11	69143251	69143460	(65943162)	C	L1M5	LINE/L1	(1823)	4323	4110	674588
149	23.1	2.1	1.5	chr11	69356136	69356516	(65730106)	+	GA-rich	Low_complexity	1	389	(0)	674949
213	30.0	0.0	0.0	chr11	69356530	69356589	(65730033)	+	MIRc	SINE/MIR	91	150	(118)	674950
393	34.1	4.2	1.4	chr11	69402605	69402812	(65683810)	+	L3	LINE/CR1	3428	3641	(458)	675036
1687	24.3	10.1	1.5	chr11	69402821	69402978	(65683644)	+	L1ME3	LINE/L1	5452	5609	(553)	675037
2540	12.4	2.8	1.4	chr11	69402979	69403337	(65683285)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	675038
902	26.3	6.1	1.9	chr11	69433460	69433820	(65652802)	C	L2	LINE/L2	(798)	2621	2245	675091
266	26.5	6.1	1.0	chr11	69434244	69434363	(65652259)	C	MIR3	SINE/MIR	(66)	142	16	675092
1342	17.7	25.1	6.9	chr11	69461115	69461611	(65625011)	+	MLT1D	LTR/ERVL-MaLR	9	595	(0)	675129
468	13.8	0.0	2.4	chr11	69705578	69705659	(65380963)	C	UCON16	Unknown	(48)	241	162	675535
788	30.9	7.2	2.1	chr11	70627148	70627527	(64459095)	+	MLT1I	LTR/ERVL-MaLR	11	411	(0)	677122
1534	15.2	5.6	5.9	chr11	70627546	70627901	(64458721)	C	Tigger4b	DNA/TcMar-Tigger	(6)	355	1	677123
1446	12.3	5.0	9.6	chr11	70784181	70784343	(64302279)	C	AluSz6	SINE/Alu	(16)	296	135	677359
34	0.0	0.0	0.0	chr11	70784344	70784375	(64302247)	+	(T)n	Simple_repeat	1	32	(0)	677360
1446	12.3	5.0	9.6	chr11	70784376	70784503	(64302119)	C	AluSz6	SINE/Alu	(178)	134	19	677359
804	6.8	0.0	1.9	chr11	70784504	70784606	(64302016)	C	AluSx	SINE/Alu	(211)	101	1	677361
12	21.0	0.0	4.8	chr11	71060419	71060460	(64026162)	+	(CCCCAGG)n	Simple_repeat	1	42	(0)	677638
452	32.7	2.0	5.7	chr11	71092072	71092344	(63994278)	C	Charlie8	DNA/hAT-Charlie	(2164)	264	16	677699
2236	12.3	0.3	0.3	chr11	71384791	71385099	(63701523)	+	AluSx1	SINE/Alu	1	309	(3)	678174
1862	20.0	9.9	0.8	chr11	71609983	71611234	(63475388)	C	SATR1	Satellite	(104)	1365	1	678499
1224	23.5	8.8	3.6	chr11	71884806	71885681	(63200941)	C	SATR1	Satellite	(70)	921	1	678923
2299	11.4	0.3	0.0	chr11	72176991	72177298	(62909324)	+	AluSx1	SINE/Alu	2	310	(2)	679483
15	18.7	3.9	3.7	chr11	72244013	72244100	(62842522)	+	G-rich	Low_complexity	1	88	(0)	679599
737	30.3	7.8	3.0	chr11	72472775	72473141	(62613481)	C	MamRep605	LTR?	(201)	648	263	680039
1624	15.3	1.8	4.2	chr11	72473222	72473508	(62613114)	C	AluJo	SINE/Alu	(15)	297	18	680040
16	17.0	0.0	0.0	chr11	73309324	73309356	(61777266)	+	(CCT)n	Simple_repeat	1	33	(0)	681607
263	29.0	0.8	10.3	chr11	73315283	73315428	(61771194)	C	MIR3	SINE/MIR	(74)	134	3	681613
206	25.9	13.8	1.2	chr11	73788257	73788338	(61298284)	+	MIR3	SINE/MIR	15	108	(100)	682676
545	24.9	7.0	6.1	chr11	74493875	74494088	(60592534)	C	L2a	LINE/L2	(5)	3421	3206	684202
955	27.9	5.1	8.3	chr11	74494106	74494550	(60592072)	C	LTR16	LTR/ERVL	(6)	432	3	684203
1051	19.8	1.7	10.0	chr11	74494641	74494960	(60591662)	+	L1M5	LINE/L1	3713	4005	(2141)	684204
6227	14.8	1.5	3.5	chr11	74542338	74543354	(60543268)	+	HERVL18-int	LTR/ERVL	2941	3936	(2111)	684291
12042	8.8	0.3	0.0	chr11	74658397	74659971	(60426651)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	684555
35825	15.3	3.6	2.3	chr11	74869998	74873955	(60212667)	+	HUERS-P3-int	LTR/ERV1	15	4291	(4628)	684948
443	33.5	4.7	3.2	chr11	75214901	75215088	(59871534)	+	MIR3	SINE/MIR	9	199	(9)	685560
1923	19.7	10.1	2.2	chr11	75282274	75282735	(59803887)	+	MLT1D	LTR/ERVL-MaLR	1	503	(2)	685691
19248	12.8	2.8	1.8	chr11	76816407	76819621	(58267001)	C	MER51-int	LTR/ERV1	(4153)	3663	417	688727
472	19.7	4.9	0.0	chr11	77589146	77589262	(57497360)	+	L1MB4	LINE/L1	6052	6174	(6)	690201
13	12.6	8.6	0.0	chr11	77589618	77589652	(57496970)	+	(CCG)n	Simple_repeat	1	38	(0)	690202
13	27.1	3.4	1.6	chr11	78189069	78189127	(56897495)	+	(CCAGC)n	Simple_repeat	1	61	(0)	691568
327	26.7	2.8	0.9	chr11	78189235	78189340	(56897282)	+	MIR3	SINE/MIR	24	131	(77)	691569
301	23.1	9.6	3.7	chr11	78752152	78752259	(56334363)	C	L2b	LINE/L2	(8)	3367	3253	692595
229	33.0	1.1	1.1	chr11	79053896	79053987	(56032635)	C	UCON21	DNA?	(144)	186	95	693162
21928	7.5	0.5	0.9	chr11	79586090	79591129	(55495493)	+	L1P2	LINE/L1	174	5176	(1143)	694239
50354	9.2	0.7	0.4	chr11	81033116	81039929	(54046693)	+	HERVK22-int	LTR/ERVK	1	6837	(0)	696796
8110	20.4	7.4	6.9	chr11	82680539	82682499	(52404123)	C	HUERS-P3b-int	LTR/ERV1	(4776)	2642	664	699274
5884	19.1	3.5	1.2	chr11	84000001	84002237	(51084385)	+	L1MA4A	LINE/L1	2435	4736	(2826)	701606
255	20.8	0.0	0.0	chr11	84002239	84002286	(51084336)	C	THE1D	LTR/ERVL-MaLR	(0)	381	334	701607
7224	14.1	1.7	0.1	chr11	84002285	84003391	(51083231)	C	THE1D-int	LTR/ERVL-MaLR	(506)	1125	1	701607
22580	11.7	1.6	2.2	chr11	85542992	85549441	(49537181)	C	L1PA7	LINE/L1	(2)	6467	3	704012
485	27.2	2.9	0.7	chr11	86144380	86144516	(48942106)	C	MIRb	SINE/MIR	(37)	231	92	705016
2282	16.2	5.6	1.6	chr11	86859107	86862366	(48224256)	+	SATR1	Satellite	893	4049	(523)	706197
24234	8.4	0.9	0.4	chr11	86962526	86968225	(48118397)	C	L1P2	LINE/L1	(439)	5715	5	706382
858	11.9	0.0	0.0	chr11	86968253	86968370	(48118252)	C	AluYc	SINE/Alu	(0)	299	182	706383
595	25.8	3.0	0.6	chr11	86968383	86968546	(48118076)	C	MIR	SINE/MIR	(86)	176	9	706384
2462	15.5	1.0	1.0	chr11	86985651	86986047	(48100575)	+	MER61B	LTR/ERV1	2	398	(29)	706417
2397	8.8	1.0	0.0	chr11	87044653	87044946	(48041676)	C	AluY	SINE/Alu	(14)	297	1	706544
1998	25.9	5.6	2.0	chr11	87331112	87331733	(47754889)	+	L1MEc	LINE/L1	63	701	(5699)	706984
874	14.8	1.8	0.0	chr11	87412425	87412586	(47674036)	+	L1MA4A	LINE/L1	4545	4709	(1434)	707086
792	19.7	0.0	0.0	chr11	87412593	87412734	(47673888)	+	L1PA13	LINE/L1	10	151	(6634)	707087
12528	10.7	1.6	0.1	chr11	87412736	87415437	(47671185)	+	L1PA13	LINE/L1	3421	6159	(4)	707088
26779	4.1	0.2	0.2	chr11	88027244	88033390	(47053232)	+	L1PA3	LINE/L1	12	6155	(0)	707958
6327	17.0	4.7	5.4	chr11	88886307	88888991	(46197631)	+	HUERS-P3b-int	LTR/ERV1	5	2639	(4779)	709216
25154	6.5	0.6	0.0	chr11	89426248	89432359	(45654263)	+	L1PA5	LINE/L1	11	6151	(3)	710028
1021	21.1	5.5	3.2	chr11	90780878	90781161	(44305461)	+	ERVL-E-int	LTR/ERVL	5374	5664	(3)	711893
1502	31.6	9.6	0.3	chr11	90781170	90781734	(44304888)	+	MLT2E	LTR/ERVL	6	628	(0)	711893
25019	6.9	1.1	0.0	chr11	93458096	93464200	(41622422)	+	L1PA6	LINE/L1	177	6321	(6)	715599
26107	4.8	0.6	0.4	chr11	94156730	94162863	(40923759)	C	L1PA4	LINE/L1	(2)	6153	4	716755
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
12	21.8	2.7	0.0	chr11	94401299	94401335	(40685287)	+	G-rich	Low_complexity	1	38	(0)	717061
1080	23.0	5.8	5.5	chr11	95507503	95508025	(39578597)	C	MLT1E1	LTR/ERVL-MaLR	(28)	626	4	718734
1655	19.4	5.2	6.8	chr11	95578108	95578522	(39508100)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	718849
12	27.7	0.0	0.0	chr11	95789478	95789516	(39297106)	+	(TCC)n	Simple_repeat	1	39	(0)	719160
641	29.4	10.5	0.8	chr11	97458554	97458803	(37627819)	C	LTR79	LTR/ERVL	(173)	354	78	721248
926	31.6	6.7	12.9	chr11	97821519	97821787	(37264835)	+	L2a	LINE/L2	2287	2559	(860)	721670
22560	9.1	0.7	1.1	chr11	98712433	98718611	(36368011)	C	L1PA7	LINE/L1	(10)	6144	5	722874
247	19.2	1.9	0.0	chr11	98747846	98747897	(36338725)	C	Charlie1	DNA/hAT-Charlie	(9)	2772	2720	722916
21758	10.9	2.2	1.3	chr11	98747917	98754002	(36332620)	+	L1PA7	LINE/L1	34	6150	(4)	722917
19174	16.6	3.5	1.3	chr11	98841310	98845850	(36240772)	C	L1MA3	LINE/L1	(2881)	4684	20	723023
22955	9.3	0.8	1.0	chr11	100256504	100262951	(34823671)	+	L1PA7	LINE/L1	5	6469	(0)	724837
14	7.1	2.9	5.7	chr11	100687445	100687478	(34399144)	+	(CGCGCC)n	Simple_repeat	1	35	(0)	725360
14	20.9	4.3	2.0	chr11	102110476	102110522	(32976100)	+	GA-rich	Low_complexity	1	49	(0)	727405
18	21.2	4.8	1.5	chr11	102110645	102110706	(32975916)	+	(GGAGGC)n	Simple_repeat	1	65	(0)	727406
21136	10.7	0.8	3.0	chr11	102817726	102820373	(32266249)	C	L1PA7	LINE/L1	(3831)	2630	8	728509
11141	10.8	3.5	4.8	chr11	103910306	103913924	(31172698)	+	L1PA7	LINE/L1	14	3599	(2732)	730116
9932	12.1	3.5	3.3	chr11	105480211	105481311	(29605311)	+	THE1B-int	LTR/ERVL-MaLR	465	1579	(1)	732253
7731	18.4	6.2	4.4	chr11	106068532	106070904	(29015718)	+	L1MD1	LINE/L1	3811	6233	(400)	733065
491	27.6	13.1	5.7	chr11	112830672	112830917	(22255705)	C	L2c	LINE/L2	(9)	3378	3112	743715
15	4.8	0.0	0.0	chr11	113375086	113375107	(21711515)	+	(TTTG)n	Simple_repeat	1	22	(0)	744438
337	35.7	3.1	0.0	chr11	113453567	113453692	(21632930)	C	L2c	LINE/L2	(8)	3379	3250	744565
583	27.4	8.1	5.3	chr11	113697590	113697816	(21388806)	C	MIRc	SINE/MIR	(7)	261	28	745010
465	29.1	4.4	3.9	chr11	113697817	113697859	(21388763)	C	MIRb	SINE/MIR	(1)	267	226	745011
1568	17.8	4.9	9.1	chr11	113697860	113698267	(21388355)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	745012
30547	13.9	1.5	0.6	chr11	114586352	114591710	(20494912)	+	HUERS-P3-int	LTR/ERV1	15	5506	(3413)	746470
555	26.1	18.5	0.0	chr11	116504083	116504293	(18582329)	C	MIRb	SINE/MIR	(7)	261	3	749455
5690	20.9	5.0	2.6	chr11	116664583	116666720	(18419902)	+	L1M3f	LINE/L1	1251	3450	(4115)	749729
24084	7.0	1.1	0.7	chr11	116666719	116672862	(18413760)	+	L1PA6	LINE/L1	174	6325	(2)	749730
15	11.3	4.1	3.9	chr11	118152814	118152857	(16933765)	+	G-rich	Low_complexity	1	44	(0)	752413
19	26.2	2.1	5.2	chr11	118152876	118152946	(16933676)	+	(GGAGCA)n	Simple_repeat	1	96	(0)	752414
19	18.3	1.9	3.7	chr11	118152901	118152953	(16933669)	+	GA-rich	Low_complexity	1	54	(0)	752415
12	0.0	4.3	4.2	chr11	118152947	118152969	(16933653)	+	(GAGC)n	Simple_repeat	1	24	(0)	752416
12	15.8	0.0	3.3	chr11	118609723	118609752	(16476870)	+	G-rich	Low_complexity	1	30	(0)	753236
10521	3.2	3.3	0.7	chr11	119058618	119059958	(16026664)	C	SVA_C	Retroposon/SVA	(0)	1384	7	754176
37	0.0	0.0	0.0	chr11	119206290	119206323	(15880299)	+	(CGG)n	Simple_repeat	1	34	(0)	754442
19	12.8	0.0	0.0	chr11	119206523	119206556	(15880066)	+	(CAC)n	Simple_repeat	1	34	(0)	754443
359	18.2	5.0	11.4	chr11	119614615	119614763	(15471859)	+	LTR37A	LTR/ERV1	1	139	(287)	755186
711	18.8	9.3	0.6	chr11	119614775	119614940	(15471682)	+	MLT1A	LTR/ERVL-MaLR	191	372	(2)	755187
243	32.1	1.2	0.0	chr11	119807185	119807268	(15279354)	+	MIRb	SINE/MIR	168	252	(16)	755504
4400	28.7	6.3	6.1	chr11	120166233	120166736	(14919886)	C	L1MEf	LINE/L1	(5522)	614	121	756064
30	26.3	3.4	2.4	chr11	121452144	121452171	(13634451)	+	(CGGCG)n	Simple_repeat	1	49	(74)	758140
19	17.6	5.9	0.0	chr11	121452172	121452222	(13634400)	+	(GGC)n	Simple_repeat	1	54	(0)	758141
30	26.3	3.4	2.4	chr11	121452223	121452262	(13634360)	+	(CGGCG)n	Simple_repeat	50	123	(0)	758140
616	23.3	3.3	0.0	chr11	123301598	123301743	(11784879)	C	MER5A	DNA/hAT-Charlie	(0)	189	39	761281
3205	14.0	16.0	2.6	chr11	124374036	124374696	(10711926)	C	LTR27C	LTR/ERV1	(0)	767	1	762945
213	33.5	10.0	4.1	chr11	125218248	125218565	(9868057)	C	L2a	LINE/L2	(54)	3372	3010	764166
6271	9.9	1.8	1.3	chr11	125552167	125553314	(9533308)	C	HUERS-P3b-int	LTR/ERV1	(4776)	2642	1769	764722
10111	14.6	2.1	4.4	chr11	125553312	125554733	(9531889)	C	HUERS-P3b-int	LTR/ERV1	(7267)	1652	254	764722
537	25.4	15.4	4.4	chr11	126095443	126095648	(8990974)	+	MIRb	SINE/MIR	20	252	(16)	765505
248	34.0	8.9	0.0	chr11	126095929	126096062	(8990560)	C	MIR	SINE/MIR	(57)	211	60	765506
56	9.8	0.0	3.2	chr11	126147156	126147250	(8939372)	+	(CCCT)n	Simple_repeat	1	95	(0)	765595
1230	24.1	9.1	2.7	chr11	126327140	126327582	(8759040)	C	L1MC4	LINE/L1	(370)	7672	7199	765917
21	4.0	0.0	0.0	chr11	126821330	126821355	(8265267)	+	(TA)n	Simple_repeat	1	26	(0)	766696
8872	13.6	4.5	4.8	chr11	127897541	127899121	(7187501)	C	LTR12C	LTR/ERV1	(0)	1579	5	768191
8076	12.8	4.3	2.4	chr11	129173065	129173934	(5912688)	+	L1P3	LINE/L1	3215	4191	(1955)	769908
27413	2.9	0.1	0.1	chr11	129173932	129179956	(5906666)	+	L1PA3	LINE/L1	128	6154	(1)	769910
413	32.1	3.1	2.1	chr11	130199075	130199268	(4887354)	+	MER91A	DNA/hAT-Tip100	1	196	(0)	771517
1782	3.8	0.0	0.5	chr11	133588998	133589211	(1497411)	C	L1PA5	LINE/L1	(2)	6152	5940	776135
1509	25.4	3.6	8.8	chr11	134386794	134387350	(699272)	+	MER74A	LTR/ERVL	1	527	(31)	777153
253	33.9	8.4	0.8	chr11	134471553	134471683	(614939)	+	MIRc	SINE/MIR	110	251	(17)	777278
253	27.8	6.7	3.0	chr11	134575451	134575550	(511072)	+	L1ME3G	LINE/L1	491	594	(330)	777406
537	26.7	12.6	3.1	chr11	134643594	134643817	(442805)	+	MIRb	SINE/MIR	5	260	(8)	777488
23065	6.5	1.0	0.1	chr12	342807	348918	(132926391)	+	L1PA6	LINE/L1	4	6152	(2)	778589
26	12.7	1.9	1.8	chr12	507565	507618	(132767691)	+	(ACCCTAC)n	Simple_repeat	1	55	(0)	778877
224	23.2	1.6	0.9	chr12	1604758	1605303	(131670006)	+	(GT)n	Simple_repeat	1	555	(0)	780942
2261	8.5	0.0	1.3	chr12	1659433	1659738	(131615571)	C	AluSz	SINE/Alu	(10)	302	1	781036
432	32.4	4.9	1.6	chr12	1659972	1660228	(131615081)	+	Tigger16b	DNA/TcMar-Tigger	65	330	(6)	781037
28	26.6	2.8	2.7	chr12	1690996	1691104	(131584205)	+	(CGG)n	Simple_repeat	1	112	(0)	781100
17	15.7	0.0	2.6	chr12	1691119	1691157	(131584152)	+	(CCCCCTC)n	Simple_repeat	1	39	(0)	781101
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
2360	9.6	0.3	0.0	chr12	2357689	2357991	(130917318)	+	AluSq2	SINE/Alu	1	304	(9)	782090
67	0.0	0.0	0.0	chr12	2358252	2358308	(130917001)	+	(TG)n	Simple_repeat	1	57	(0)	782091
272	28.6	19.5	0.0	chr12	2358388	2358527	(130916782)	C	MIRb	SINE/MIR	(64)	204	31	782092
22	23.2	2.8	1.4	chr12	2834771	2834842	(130440467)	+	(TGCCTCC)n	Simple_repeat	1	74	(0)	782734
37	0.0	0.0	0.0	chr12	2835160	2835191	(130440118)	+	(TG)n	Simple_repeat	1	32	(0)	782735
20	13.7	0.0	0.0	chr12	2835192	2835223	(130440086)	+	(AG)n	Simple_repeat	1	32	(0)	782736
187	31.2	1.2	5.9	chr12	3272390	3272474	(130002835)	C	L2a	LINE/L2	(0)	3387	3307	783587
323	10.4	0.5	0.0	chr12	3272513	3272572	(130002737)	C	FLAM_C	SINE/Alu	(90)	43	1	783588
2418	20.9	10.7	0.9	chr12	4600615	4601161	(128674148)	C	MER21C	LTR/ERVL	(323)	615	9	785774
23350	9.2	2.8	3.0	chr12	4671945	4678293	(128597016)	+	L1PA7	LINE/L1	7	6469	(0)	785889
5353	3.2	0.3	0.0	chr12	4689320	4689938	(128585371)	C	SVA_C	Retroposon/SVA	(20)	1364	744	785907
228	22.8	3.4	0.0	chr12	5523220	5523276	(127752033)	C	MIR3	SINE/MIR	(49)	159	101	787149
619	25.5	2.5	10.1	chr12	6326333	6326402	(126948907)	+	MIRb	SINE/MIR	205	262	(6)	788484
30	0.0	0.0	0.0	chr12	6635958	6635986	(126639323)	+	(CTGGG)n	Simple_repeat	1	29	(0)	789082
22704	13.4	1.5	0.2	chr12	8321178	8324368	(124950941)	C	HERVS71-int	LTR/ERV1	(5742)	3236	4	792104
1738	21.1	8.6	1.5	chr12	8446007	8447886	(124827423)	+	SATR1	Satellite	1	2014	(47)	792291
3680	17.9	11.7	1.8	chr12	8707049	8707823	(124567486)	C	MER21B	LTR/ERVL	(6)	862	1	792764
452	30.2	10.5	10.1	chr12	9570335	9570702	(123704607)	+	L1MDa	LINE/L1	620	989	(5644)	794041
4579	10.4	6.5	4.0	chr12	9646925	9647682	(123627627)	C	LTR19C	LTR/ERV1	(0)	779	1	794129
1095	17.0	9.1	2.0	chr12	9647683	9647736	(123627573)	C	L1MC2	LINE/L1	(269)	6075	6015	794128
1878	16.3	1.3	0.7	chr12	11668000	11668132	(121607177)	C	AluJr	SINE/Alu	(177)	135	2	796840
313	29.0	2.7	1.8	chr12	11668661	11668769	(121606540)	+	CR1-13_AMi	LINE/CR1	500	609	(115)	796842
224	19.0	8.4	9.1	chr12	12082092	12082222	(121193087)	C	MIRc	SINE/MIR	(44)	164	40	797487
12	12.3	5.1	4.9	chr12	12562720	12562758	(120712551)	+	G-rich	Low_complexity	1	41	(0)	798343
23	11.5	0.0	0.0	chr12	12562926	12562963	(120712346)	+	(CCT)n	Simple_repeat	1	38	(0)	798344
13	20.4	0.0	7.7	chr12	12562962	12563013	(120712296)	+	(CCCGCG)n	Simple_repeat	1	52	(0)	798345
744	24.2	5.5	11.4	chr12	14314556	14314617	(118960692)	+	MLT1E3	LTR/ERVL-MaLR	9	65	(447)	801161
1965	13.3	1.4	0.7	chr12	14314618	14314910	(118960399)	C	AluJb	SINE/Alu	(17)	295	1	801162
744	24.2	5.5	11.4	chr12	14314911	14315118	(118960191)	+	MLT1E3	LTR/ERVL-MaLR	66	262	(250)	801161
9808	3.4	0.6	7.9	chr12	14354081	14355540	(118919769)	+	SVA_C	Retroposon/SVA	32	1384	(0)	801240
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
25458	5.2	0.5	0.1	chr12	17559109	17564909	(115710400)	C	L1PA4	LINE/L1	(0)	6155	334	805648
661	26.2	4.7	5.3	chr12	17564930	17565069	(115710240)	+	L1MD	LINE/L1	2110	2249	(3897)	805649
10532	14.7	3.9	1.7	chr12	17868112	17870372	(115404937)	+	L1P3	LINE/L1	6	2293	(4190)	805982
26747	4.4	0.2	0.1	chr12	20769061	20775103	(112500206)	+	L1PA3	LINE/L1	112	6155	(0)	810084
524	20.2	0.0	1.0	chr12	21418987	21419086	(111856223)	+	L1MDa	LINE/L1	28	126	(6507)	810747
470	20.6	8.5	0.0	chr12	21419097	21419193	(111856116)	+	L1MDa	LINE/L1	250	355	(6278)	810747
27576	2.5	0.1	0.0	chr12	21419216	21425234	(111850075)	+	L1PA2	LINE/L1	134	6155	(0)	810748
24	20.6	0.0	5.4	chr12	21501481	21501554	(111773755)	+	(TCTCCGA)n	Simple_repeat	1	74	(0)	810844
22962	7.1	0.9	0.4	chr12	21622801	21627711	(111647598)	C	L1PA6	LINE/L1	(1224)	4922	4	811013
23348	8.5	0.9	1.7	chr12	21789569	21796016	(111479293)	C	L1PA7	LINE/L1	(1)	6468	1	811234
7196	10.6	1.9	0.1	chr12	22023285	22024325	(111250984)	+	THE1B-int	LTR/ERVL-MaLR	521	1580	(0)	811524
14	28.6	3.1	1.5	chr12	22046170	22046234	(111229075)	+	G-rich	Low_complexity	1	67	(0)	811566
2466	6.3	0.0	3.2	chr12	23320327	23320642	(109954667)	C	AluY	SINE/Alu	(5)	306	1	813434
2051	15.6	1.6	0.0	chr12	23320643	23320943	(109954366)	C	AluSz6	SINE/Alu	(6)	306	1	813435
3382	9.4	4.3	3.4	chr12	23320944	23321169	(109954140)	+	L1MA1	LINE/L1	6077	6297	(5)	813433
14	17.4	2.3	4.5	chr12	24563185	24563227	(108712082)	+	(GGCG)n	Simple_repeat	1	44	(0)	815081
12	23.9	0.0	2.4	chr12	24563250	24563290	(108712019)	+	(GCGAGCC)n	Simple_repeat	1	41	(0)	815082
57	1.9	0.0	0.0	chr12	24563496	24563548	(108711761)	+	(CA)n	Simple_repeat	1	53	(0)	815083
17345	2.3	0.3	0.0	chr12	25486955	25489653	(107785656)	C	L1PA2	LINE/L1	(3316)	2830	125	816585
15	6.3	5.4	5.1	chr12	25958492	25958540	(107316769)	+	(GGCGCG)n	Simple_repeat	1	49	(0)	817285
30	0.0	0.0	0.0	chr12	25958634	25958662	(107316647)	+	(GCCCG)n	Simple_repeat	1	29	(0)	817286
213	29.3	7.4	0.0	chr12	26043050	26043124	(107232185)	C	L2b	LINE/L2	(6)	3369	3289	817416
338	33.9	2.1	8.0	chr12	26043289	26043599	(107231710)	C	L2b	LINE/L2	(410)	3009	2718	817416
23601	10.5	0.6	0.4	chr12	27169708	27172339	(106102970)	C	L1PA7	LINE/L1	(3832)	2629	2	819102
16006	7.2	1.3	0.1	chr12	29092376	29094460	(104180849)	+	L1PA6	LINE/L1	1	2109	(4075)	821924
1014	29.2	7.6	3.9	chr12	29099570	29100001	(104175308)	+	MSTB2	LTR/ERVL-MaLR	1	449	(8)	821931
550	29.5	11.2	4.3	chr12	30235790	30236547	(103038762)	C	L2a	LINE/L2	(0)	3426	2465	823461
12293	7.0	1.3	0.1	chr12	30365939	30367493	(102907816)	C	L1P2	LINE/L1	(4609)	1575	1	823620
1647	20.4	5.6	7.6	chr12	31682254	31682804	(101592505)	C	LTR55	LTR/ERVL?	(2)	546	8	825803
13	31.2	1.0	6.1	chr12	31728865	31728961	(101546348)	+	(GGCGG)n	Simple_repeat	1	98	(0)	825911
328	29.6	0.0	5.3	chr12	31729530	31729661	(101545648)	C	MIRb	SINE/MIR	(16)	252	128	825912
34	0.0	0.0	0.0	chr12	32048741	32048771	(101226538)	+	(AAC)n	Simple_repeat	1	31	(0)	826687
2245	9.9	0.0	0.7	chr12	32048798	32049093	(101226216)	+	MER1B	DNA/hAT-Charlie	46	339	(0)	826688
2416	9.6	0.7	0.3	chr12	32139559	32139859	(101135450)	C	AluSc	SINE/Alu	(7)	302	1	826910
867	23.1	3.0	1.1	chr12	34303938	34304570	(98970739)	+	GSATII	Satellite/centr	4771	5513	(1067)	830055
540	24.9	6.0	2.4	chr12	34304571	34304780	(98970529)	+	GSATX	Satellite/centr	1	218	(0)	830059
867	23.1	3.0	1.1	chr12	34304781	34305646	(98969663)	+	GSATII	Satellite/centr	5514	6541	(39)	830055
1200	16.6	4.8	0.5	chr12	38151610	38160943	(95114366)	+	GSATX	Satellite/centr	1	9733	(21)	830764
19	11.3	2.6	0.0	chr12	39442876	39442913	(93832396)	+	(CCGCCGC)n	Simple_repeat	1	39	(0)	832451
19	27.2	1.2	3.7	chr12	39443387	39443466	(93831843)	+	(CCCCG)n	Simple_repeat	1	81	(0)	832452
25029	5.7	0.6	0.0	chr12	39664079	39670184	(93605125)	C	L1PA4	LINE/L1	(0)	6155	14	832763
9137	12.8	2.9	1.7	chr12	39941087	39943728	(93331581)	C	L1PB1	LINE/L1	(325)	6542	3796	833082
1514	12.7	2.1	0.0	chr12	39943729	39943964	(93331345)	+	L1P3	LINE/L1	215	455	(6006)	833083
9993	14.9	5.7	2.3	chr12	41009563	41012858	(92262451)	C	HUERS-P3-int	LTR/ERV1	(5219)	3700	15	834491
26905	3.5	0.3	0.1	chr12	41081469	41087471	(92187838)	C	L1PA3	LINE/L1	(10)	6145	138	834589
2165	15.4	1.1	0.3	chr12	41087472	41087823	(92187486)	+	THE1B	LTR/ERVL-MaLR	10	364	(0)	834587
27432	2.9	0.1	0.0	chr12	41666305	41672330	(91602979)	C	L1PA2	LINE/L1	(0)	6155	124	835354
301	30.5	6.1	9.1	chr12	42699228	42699447	(90575862)	+	MLT1J	LTR/ERVL-MaLR	99	311	(201)	837078
20603	9.3	1.8	2.0	chr12	42707903	42714407	(90560902)	+	L1PA7	LINE/L1	13	6462	(7)	837093
838	29.7	12.3	0.8	chr12	42782235	42782614	(90492695)	+	MLT2F	LTR/ERVL	7	436	(227)	837180
10786	14.7	1.2	2.5	chr12	44476095	44479629	(88795680)	+	HUERS-P3-int	LTR/ERV1	15	3782	(5137)	839501
4750	10.5	0.6	2.3	chr12	44558361	44559054	(88716255)	+	L1PA7	LINE/L1	4	685	(5776)	839602
26766	3.8	0.3	0.0	chr12	44681418	44687432	(88587877)	C	L1PA3	LINE/L1	(1)	6154	124	839787
2290	10.2	0.0	1.9	chr12	44949039	44949351	(88325958)	+	AluSc	SINE/Alu	1	307	(2)	840111
22845	7.0	1.1	0.2	chr12	45391884	45397988	(87877321)	+	L1PA6	LINE/L1	7	6147	(7)	840744
15	29.2	2.9	1.4	chr12	45729041	45729108	(87546201)	+	(GGCA)n	Simple_repeat	1	70	(0)	841278
17	17.1	5.4	3.4	chr12	45729238	45729306	(87546003)	+	(CCG)n	Simple_repeat	1	70	(0)	841279
22155	8.3	0.7	0.4	chr12	46189949	46196086	(87079223)	C	L1PA6	LINE/L1	(11)	6143	5	841952
333	10.6	0.0	0.0	chr12	46196088	46196134	(87079175)	+	THE1B	LTR/ERVL-MaLR	318	364	(0)	841951
22188	8.1	0.2	0.1	chr12	46246033	46248874	(87026435)	+	L1PA6	LINE/L1	1	2833	(3313)	842023
16500	8.8	0.8	0.9	chr12	46582779	46586459	(86688850)	C	L1PA6	LINE/L1	(2478)	3668	5	842463
12	18.3	2.4	2.4	chr12	47080763	47080787	(86194522)	+	(TTCTCTC)n	Simple_repeat	1	26	(0)	843080
30	7.5	5.1	1.6	chr12	47080788	47080846	(86194463)	+	(CT)n	Simple_repeat	1	62	(0)	843081
12	18.3	2.4	2.4	chr12	47080847	47080861	(86194448)	+	(TTCTCTC)n	Simple_repeat	6	19	(0)	843082
5232	3.8	2.6	0.2	chr12	47169904	47170539	(86104770)	C	SVA_B	Retroposon/SVA	(0)	1383	732	843206
722	23.0	8.5	4.9	chr12	47170575	47170912	(86104397)	C	L1MEj	LINE/L1	(3782)	2364	1905	843207
6773	19.7	7.7	0.4	chr12	47612430	47613874	(85661435)	+	MSTB1-int	LTR/ERVL-MaLR	2	1560	(91)	843957
16820	8.1	1.5	1.4	chr12	48552505	48554329	(84720980)	C	L1PA4	LINE/L1	(4326)	2031	177	845330
10824	12.1	1.8	1.4	chr12	48554336	48555917	(84719392)	C	HUERS-P3b-int	LTR/ERV1	(5067)	2351	764	845332
1622	16.5	0.0	3.7	chr12	48623557	48623829	(84651480)	C	AluJb	SINE/Alu	(48)	264	2	845423
13	22.7	2.3	2.3	chr12	48782934	48782976	(84492333)	+	(CAG)n	Simple_repeat	1	44	(0)	845770
13	26.3	1.6	4.6	chr12	48978223	48978286	(84297023)	+	G-rich	Low_complexity	1	65	(0)	846198
14	24.8	3.0	4.3	chr12	49234624	49234690	(84040619)	+	(GCCGCC)n	Simple_repeat	1	69	(0)	846738
2392	7.2	0.0	0.0	chr12	49234824	49235115	(84040194)	C	AluSq4	SINE/Alu	(19)	292	1	846739
258	27.7	5.0	0.2	chr12	50032675	50032764	(83242545)	+	MIR	SINE/MIR	24	117	(151)	848284
2247	10.9	0.0	0.7	chr12	50308205	50308508	(82966801)	C	AluSc	SINE/Alu	(7)	302	1	848894
987	16.7	0.0	5.6	chr12	50308561	50308740	(82966569)	+	AluJb	SINE/Alu	134	303	(9)	848895
26683	5.2	0.2	0.1	chr12	50972507	50978654	(82296655)	+	L1PA5	LINE/L1	2	6154	(0)	850344
1788	14.8	0.7	8.5	chr12	51248771	51249100	(82026209)	+	AluSx	SINE/Alu	1	304	(8)	850933
2371	19.4	3.8	7.4	chr12	51249101	51249615	(82025694)	+	MER21A	LTR/ERVL	436	931	(0)	850932
20	16.4	0.0	5.7	chr12	51391449	51391501	(81883808)	+	GA-rich	Low_complexity	1	53	(0)	851261
13	12.7	2.6	5.1	chr12	51391968	51392005	(81883304)	+	(AGCCCGG)n	Simple_repeat	1	39	(0)	851262
735	16.2	5.5	8.9	chr12	51392222	51392291	(81883018)	+	MER5A	DNA/hAT-Charlie	3	68	(121)	851263
18758	4.1	0.1	0.2	chr12	51568649	51571798	(81703511)	C	L1PA3	LINE/L1	(2999)	3147	3	851570
342	30.4	5.3	3.0	chr12	52014321	52014483	(81260826)	C	MIRc	SINE/MIR	(6)	256	87	852303
1662	15.0	1.2	1.9	chr12	52094948	52095207	(81180102)	C	AluJb	SINE/Alu	(14)	298	41	852433
1962	18.7	7.5	5.2	chr12	52095210	52096482	(81178827)	C	SATR1	Satellite	(92)	1302	1	852434
1177	22.6	1.1	15.1	chr12	52098826	52099449	(81175860)	C	SATR2	Satellite	(0)	536	1	852437
1995	16.9	9.9	1.2	chr12	52099450	52100450	(81174859)	+	SATR1	Satellite	2422	3985	(0)	852436
248	32.6	1.1	0.0	chr12	52144162	52144253	(81131056)	+	MIRb	SINE/MIR	95	187	(81)	852512
468	27.2	7.1	4.2	chr12	52197809	52198000	(81077309)	+	L2a	LINE/L2	3228	3425	(1)	852611
54	0.0	0.0	0.0	chr12	53230837	53230882	(80044427)	+	(GT)n	Simple_repeat	1	46	(0)	854300
1788	7.9	4.1	1.4	chr12	53437358	53437640	(79837669)	+	L1P3	LINE/L1	5039	5329	(817)	854760
5545	2.1	0.5	0.1	chr12	53437641	53438304	(79837005)	+	SVA_C	Retroposon/SVA	718	1383	(1)	854761
213	35.2	3.2	1.1	chr12	53866741	53866832	(79408477)	+	L3b	LINE/CR1	5061	5154	(78)	855579
180	18.4	7.5	5.8	chr12	53867144	53867195	(79408114)	+	Tigger19a	DNA/TcMar-Tigger	3	55	(268)	855580
24	17.9	3.0	2.9	chr12	54614405	54614471	(78660838)	+	(GTGTGA)n	Simple_repeat	1	69	(0)	856736
630	26.6	3.3	1.7	chr12	54614588	54614767	(78660542)	C	MIRb	SINE/MIR	(73)	195	13	856737
27589	2.6	0.3	0.4	chr12	55081366	55087407	(78187902)	C	L1PA3	LINE/L1	(0)	6155	124	857362
35	0.0	0.0	0.0	chr12	55087491	55087520	(78187789)	+	(GT)n	Simple_repeat	1	30	(0)	857363
25729	3.5	0.2	0.1	chr12	55589938	55595956	(77679353)	+	L1PA3	LINE/L1	126	6147	(8)	857912
12	18.8	2.6	2.6	chr12	56242409	56242446	(77032863)	+	G-rich	Low_complexity	1	39	(0)	859144
24	23.2	4.9	1.2	chr12	56258303	56258384	(77016925)	+	(CGG)n	Simple_repeat	1	86	(0)	859169
8145	2.6	0.1	35.5	chr12	56788457	56790602	(76484707)	C	SVA_D	Retroposon/SVA	(1)	1385	1	860265
9681	5.8	0.5	9.8	chr12	56878757	56880233	(76395076)	+	SVA_B	Retroposon/SVA	45	1383	(0)	860420
283	32.3	3.0	2.3	chr12	57187536	57187679	(76087630)	+	MIRc	SINE/MIR	35	181	(87)	860836
13	12.5	0.0	0.0	chr12	57633134	57633159	(75642150)	+	(CGCAG)n	Simple_repeat	1	26	(0)	861598
29	0.0	0.0	0.0	chr12	57772207	57772234	(75503075)	+	(GCTGG)n	Simple_repeat	1	28	(0)	861800
440	20.9	2.6	3.5	chr12	57865070	57865183	(75410126)	C	L2a	LINE/L2	(2)	3424	3312	861950
21280	2.8	0.1	0.4	chr12	58109258	58115306	(75160003)	C	L1PA2	LINE/L1	(0)	6155	129	862320
2162	18.9	8.7	4.8	chr12	59529930	59533521	(73741788)	+	SATR1	Satellite	2181	6129	(0)	864216
366	25.2	4.3	17.4	chr12	59552519	59552840	(73722469)	C	SATR2	Satellite	(38)	281	4	864227
2208	16.9	6.9	5.8	chr12	59552841	59553148	(73722161)	+	SATR1	Satellite	3017	3362	(1)	864226
2271	14.3	8.9	1.5	chr12	59552902	59554127	(73721182)	C	SATR1	Satellite	(49)	1316	1	864228
16165	18.6	3.5	2.0	chr12	60644460	60648616	(72626693)	C	HUERS-P3-int	LTR/ERV1	(1928)	6991	1235	865603
1808	22.5	1.5	1.0	chr12	60648618	60649003	(72626306)	C	HUERS-P3-int	LTR/ERV1	(8531)	388	1	865603
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
23808	7.2	2.2	0.2	chr12	63634329	63640363	(69634946)	+	L1PA5	LINE/L1	4	6154	(0)	869697
2128	20.6	5.2	4.5	chr12	63772346	63772859	(69502450)	C	MER21B	LTR/ERVL	(63)	805	288	869903
2040	15.8	1.0	0.0	chr12	63772861	63773163	(69502146)	+	AluSx	SINE/Alu	2	307	(5)	869904
31	3.1	0.0	0.0	chr12	64404467	64404499	(68870810)	+	(GCG)n	Simple_repeat	1	33	(0)	871076
23	18.1	0.0	0.0	chr12	64404541	64404586	(68870723)	+	(CCTG)n	Simple_repeat	1	46	(0)	871077
13	21.4	4.7	0.0	chr12	64404711	64404753	(68870556)	+	(CCGCT)n	Simple_repeat	1	45	(0)	871078
2843	2.2	0.0	0.0	chr12	65555108	65555418	(67719891)	C	AluYa5	SINE/Alu	(0)	311	1	872959
17351	4.4	1.3	0.8	chr12	65555419	65555740	(67719569)	C	L1PA3	LINE/L1	(5716)	439	126	872958
258	28.9	7.6	6.9	chr12	65625606	65625735	(67649574)	C	L2c	LINE/L2	(0)	3387	3257	873067
827	23.5	2.4	7.8	chr12	65626103	65626448	(67648861)	C	Arthur1B	DNA/hAT-Tip100	(71)	1154	829	873068
21	32.9	0.8	4.1	chr12	67269580	67269701	(66005608)	+	(GCGGCG)n	Simple_repeat	1	123	(0)	875650
26460	2.7	0.2	0.1	chr12	67843806	67849821	(65425488)	C	L1PA3	LINE/L1	(0)	6155	131	876503
17	19.6	0.0	0.0	chr12	67849906	67849923	(65425386)	+	A-rich	Low_complexity	1	18	(0)	876504
5838	7.0	4.2	0.9	chr12	69374416	69375914	(63899395)	C	SVA_B	Retroposon/SVA	(7)	1376	31	879155
232	19.8	15.8	0.0	chr12	69470052	69470173	(63805136)	+	MIRc	SINE/MIR	3	159	(49)	879353
13	16.7	4.8	2.3	chr12	69470606	69470647	(63804662)	+	(GCTCCGG)n	Simple_repeat	1	44	(0)	879354
10067	4.3	0.9	5.5	chr12	69758992	69760436	(63514873)	C	SVA_C	Retroposon/SVA	(7)	1377	1	879868
2298	16.7	10.4	1.8	chr12	70939507	70940796	(62334513)	+	SATR1	Satellite	2105	4151	(1827)	881630
975	20.9	2.4	14.7	chr12	70940797	70941679	(62333630)	C	SATR2	Satellite	(0)	773	1	881631
2298	16.7	10.4	1.8	chr12	70942985	70943373	(62331936)	+	SATR1	Satellite	5353	5978	(0)	881630
2233	16.3	8.9	2.1	chr12	70943257	70945267	(62330042)	C	SATR1	Satellite	(0)	2149	1	881632
817	25.5	13.9	5.6	chr12	71464837	71465230	(61810079)	C	LTR16	LTR/ERVL	(4)	434	3	882337
6924	7.9	1.1	0.4	chr12	73356742	73358318	(59916991)	+	L1PA8	LINE/L1	4590	6172	(0)	884861
16291	7.9	0.2	0.7	chr12	73500001	73504208	(59771101)	C	L1P1	LINE/L1	(1961)	4185	1	885048
16	29.9	0.0	1.7	chr12	75207767	75207825	(58067484)	+	(CGG)n	Simple_repeat	1	59	(0)	887228
22391	11.0	1.3	1.1	chr12	77803096	77809633	(55465676)	C	L1PA8	LINE/L1	(7)	6480	2	891319
2112	16.5	4.4	5.3	chr12	79460428	79471195	(53804114)	+	SATR2	Satellite	1	10678	(1)	893545
22302	11.5	1.5	0.7	chr12	80283864	80290348	(52984961)	C	L1PA8	LINE/L1	(4)	6483	7	894803
299	33.7	9.8	9.5	chr12	81874214	81874518	(51400791)	+	L2c	LINE/L2	3081	3386	(1)	896989
12	8.9	4.2	0.0	chr12	83752566	83752589	(49522720)	+	(AAAT)n	Simple_repeat	1	25	(0)	899418
232	24.1	8.1	1.2	chr12	83752590	83752669	(49522640)	C	L1ME4b	LINE/L1	(7)	885	800	899419
1186	19.9	4.2	1.7	chr12	83752685	83752972	(49522337)	+	MER61B	LTR/ERV1	1	393	(34)	899420
287	28.5	8.2	0.0	chr12	83752990	83753112	(49522197)	C	L1ME4b	LINE/L1	(131)	761	628	899419
2021	18.0	0.8	2.4	chr12	84851361	84851730	(48423579)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	900840
11591	10.4	1.5	0.0	chr12	86036211	86037927	(47237382)	C	L1PA7	LINE/L1	(1890)	4571	2829	902439
3339	14.3	5.6	3.0	chr12	86354767	86355342	(46919967)	C	LTR12	LTR/ERV1	(234)	592	1	902849
752	20.9	0.0	5.7	chr12	87086569	87086726	(46188583)	C	AluJr	SINE/Alu	(26)	286	138	903763
26870	3.5	0.1	0.1	chr12	87098407	87104423	(46170886)	+	L1PA3	LINE/L1	129	6139	(16)	903778
22949	9.3	1.0	0.5	chr12	88667153	88673604	(44601705)	+	L1PA7	LINE/L1	1	6466	(3)	905841
11612	10.0	0.7	0.0	chr12	89052275	89053843	(44221466)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	906398
11	15.0	4.9	4.7	chr12	89709930	89709970	(43565339)	+	G-rich	Low_complexity	1	43	(0)	907478
27381	2.9	0.1	0.0	chr12	89806580	89812601	(43462708)	C	L1PA3	LINE/L1	(0)	6155	126	907618
26	0.0	0.0	0.0	chr12	89812605	89812629	(43462680)	+	(TATT)n	Simple_repeat	1	25	(0)	907619
2338	9.8	0.0	0.0	chr12	89812630	89812914	(43462395)	C	AluSx	SINE/Alu	(27)	285	1	907620
2203	11.9	2.3	0.0	chr12	90062392	90062693	(43212616)	+	AluSz	SINE/Alu	1	309	(3)	907999
1405	22.0	3.4	1.7	chr12	90062719	90063010	(43212299)	C	MLT1A0	LTR/ERVL-MaLR	(58)	307	11	908000
603	31.1	9.4	0.5	chr12	90063066	90063288	(43212021)	+	MLT1J2	LTR/ERVL-MaLR	185	429	(19)	908001
22399	9.5	0.7	2.5	chr12	90749470	90755760	(42519549)	C	L1PA7	LINE/L1	(0)	6154	8	908990
41	31.4	3.6	3.0	chr12	90755776	90755835	(42519474)	+	(AT)n	Simple_repeat	1	62	(0)	908991
13	23.6	6.0	0.0	chr12	92929241	92929290	(40346019)	+	(GAGC)n	Simple_repeat	1	53	(0)	912350
2912	27.1	2.8	3.5	chr12	93870122	93870947	(39404362)	+	L1M4b	LINE/L1	25	844	(6023)	914262
805	15.0	5.3	3.7	chr12	93892232	93892418	(39382891)	C	MER96B	DNA/hAT-Tip100	(227)	190	1	914291
24179	6.8	0.9	0.3	chr12	94389500	94395161	(38880148)	+	L1PA6	LINE/L1	3	5682	(472)	915127
584	18.6	2.6	0.0	chr12	95971018	95971130	(37304179)	+	MER5A1	DNA/hAT-Charlie	51	166	(0)	918207
220	35.6	8.0	0.9	chr12	95971139	95971254	(37304055)	+	L2b	LINE/L2	2974	3098	(277)	918208
28	11.5	1.6	4.8	chr12	96400596	96400657	(36874652)	+	G-rich	Low_complexity	1	63	(0)	918978
659	18.2	14.9	0.7	chr12	96960467	96960621	(36314688)	C	MER90a	LTR/ERV1	(14)	600	420	919945
1020	30.8	4.0	2.0	chr12	96960627	96961020	(36314289)	+	L1M4c	LINE/L1	879	1280	(5489)	919946
20	22.1	0.0	4.8	chr12	99984569	99984631	(33290678)	+	GA-rich	Low_complexity	1	63	(0)	924662
12	15.7	2.6	5.0	chr12	99984929	99984967	(33290342)	+	(GGCG)n	Simple_repeat	1	40	(0)	924663
1637	12.4	0.0	1.8	chr12	101145762	101146033	(32129276)	+	HERVH-int	LTR/ERV1	1878	2144	(5569)	926741
27028	1.6	0.2	0.0	chr12	101146044	101152064	(32123245)	+	L1HS	LINE/L1	124	6155	(0)	926742
2421	12.8	1.9	2.1	chr12	101856037	101856412	(31418897)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	928106
12	35.3	0.0	0.0	chr12	101876997	101877053	(31398256)	+	(CCCAC)n	Simple_repeat	1	57	(0)	928160
5340	2.7	0.0	0.6	chr12	102250636	102251261	(31024048)	C	SVA_B	Retroposon/SVA	(0)	1383	762	928774
692	31.8	15.5	12.4	chr12	103723541	103724459	(29550850)	C	L2a	LINE/L2	(2004)	1415	287	931156
209	23.6	9.2	4.3	chr12	103724503	103724595	(29550714)	+	L2c	LINE/L2	3242	3339	(48)	931160
4722	9.2	3.6	1.1	chr12	105090282	105090909	(28184400)	+	LTR9B	LTR/ERV1	1	644	(0)	933818
12	16.6	4.5	4.3	chr12	105107671	105107714	(28167595)	+	(GAGCCG)n	Simple_repeat	1	46	(0)	933857
186	18.2	6.4	0.0	chr12	105330337	105330380	(27944929)	C	L2c	LINE/L2	(3)	3384	3338	934180
15	12.8	2.8	2.7	chr12	105330657	105330692	(27944617)	+	G-rich	Low_complexity	1	37	(0)	934181
13	23.2	0.0	0.0	chr12	106956029	106956064	(26319245)	+	(CCCGGC)n	Simple_repeat	1	36	(0)	937152
11	22.1	3.9	3.8	chr12	106956101	106956151	(26319158)	+	(CCCTGCC)n	Simple_repeat	1	53	(0)	937153
2266	11.9	2.4	2.6	chr12	107343630	107344010	(25931299)	C	THE1D	LTR/ERVL-MaLR	(0)	381	2	937919
1174	26.4	4.7	9.0	chr12	107344011	107344385	(25930924)	C	MLT1J	LTR/ERVL-MaLR	(130)	382	26	937918
732	27.4	17.5	2.0	chr12	108237367	108237712	(25037597)	C	MamTip3	DNA/hAT-Tip100	(16)	484	74	939817
350	31.6	9.3	1.8	chr12	108237799	108238017	(25037292)	C	MamRep564	Unknown	(114)	243	7	939818
654	15.1	10.3	0.5	chr12	109203338	109203418	(24071891)	C	L1MC3	LINE/L1	(202)	7583	7505	941994
573	26.8	1.9	4.3	chr12	109203474	109203637	(24071672)	+	L2a	LINE/L2	3264	3423	(3)	941990
387	25.2	3.6	5.3	chr12	109203790	109203902	(24071407)	+	L2a	LINE/L2	3316	3426	(0)	941996
267	23.3	0.0	0.0	chr12	110501338	110501397	(22773912)	C	Charlie4z	DNA/hAT-Charlie	(63)	104	45	944881
11	24.4	4.0	1.9	chr12	110502042	110502091	(22773218)	+	(CCGTCA)n	Simple_repeat	1	52	(0)	944882
15	24.7	3.8	0.0	chr12	111599329	111599381	(21675928)	+	G-rich	Low_complexity	1	55	(0)	947449
14	13.2	2.9	2.8	chr12	111599379	111599413	(21675896)	+	(CCGCC)n	Simple_repeat	1	36	(0)	947450
15	17.2	0.0	0.0	chr12	111842307	111842339	(21432970)	+	(GGCGGA)n	Simple_repeat	1	33	(0)	948010
18	23.0	1.5	4.5	chr12	111842515	111842580	(21432729)	+	(GCC)n	Simple_repeat	1	67	(0)	948011
1475	16.7	10.8	0.4	chr12	112418286	112418543	(20856766)	C	AluJb	SINE/Alu	(24)	288	1	949168
373	23.0	2.9	9.9	chr12	112418544	112418648	(20856661)	C	MIR	SINE/MIR	(110)	152	56	949169
14	25.4	3.0	4.4	chr12	112418853	112418936	(20856373)	+	(GGC)n	Simple_repeat	1	82	(0)	949170
1914	15.8	0.3	0.0	chr12	112458756	112459046	(20816263)	+	AluJb	SINE/Alu	5	296	(16)	949285
216	32.0	4.6	2.3	chr12	113305092	113305219	(19970090)	C	MIR3	SINE/MIR	(73)	135	5	951242
1109	22.3	0.5	4.8	chr12	113305586	113305778	(19969531)	+	MER58A	DNA/hAT-Charlie	1	188	(36)	951243
333	26.1	3.8	7.4	chr12	113867506	113867638	(19407671)	C	Charlie7a	DNA/hAT-Charlie	(26)	246	109	952658
1801	17.3	0.6	2.8	chr12	113867639	113867956	(19407353)	+	AluSz	SINE/Alu	1	311	(1)	952659
15	16.6	0.0	6.5	chr12	114097348	114097367	(19177942)	+	A-rich	Low_complexity	1	20	(0)	953093
335	0.0	5.7	0.0	chr12	114097368	114097442	(19177867)	+	L1PA3	LINE/L1	6103	6155	(0)	953094
9986	5.5	1.9	5.4	chr12	114484257	114485690	(18789619)	C	SVA_B	Retroposon/SVA	(0)	1383	1	953805
13	15.7	8.1	4.5	chr12	114684550	114684611	(18590698)	+	(GAGGCAG)n	Simple_repeat	1	67	(0)	954268
816	26.4	18.6	3.6	chr12	115446219	115446717	(17828592)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	1	956030
13	13.3	6.1	0.0	chr12	115446797	115446829	(17828480)	+	(TTCTT)n	Simple_repeat	1	35	(0)	956031
393	33.0	7.7	2.6	chr12	116524663	116524895	(16750414)	+	MIRb	SINE/MIR	3	248	(20)	958286
91	28.6	2.4	3.5	chr12	116525162	116525500	(16749809)	+	(TTCT)n	Simple_repeat	1	347	(0)	958287
15	20.2	0.0	0.0	chr12	116750077	116750110	(16525199)	+	(ACC)n	Simple_repeat	1	34	(0)	958837
14	14.6	0.0	3.1	chr12	116910931	116910962	(16364347)	+	(GCG)n	Simple_repeat	1	32	(0)	959265
15	16.6	0.0	2.8	chr12	116911069	116911104	(16364205)	+	(GGCGCA)n	Simple_repeat	1	36	(0)	959266
707	27.8	10.2	2.1	chr12	118000328	118000643	(15274666)	C	MLT1H	LTR/ERVL-MaLR	(247)	322	1	961603
2113	11.5	0.0	4.2	chr12	118000754	118001065	(15274244)	C	AluSx1	SINE/Alu	(13)	299	1	961604
12	5.5	0.0	0.0	chr12	118372676	118372694	(14902615)	+	(CCG)n	Simple_repeat	1	19	(0)	962447
267	25.3	5.8	14.3	chr12	119373557	119373707	(13901602)	+	MIR3	SINE/MIR	2	151	(117)	964637
2558	5.9	1.3	0.0	chr12	120332872	120333176	(12942133)	C	AluSp	SINE/Alu	(4)	309	1	966768
1784	6.9	0.0	0.9	chr12	120430133	120430350	(12844959)	C	AluSx	SINE/Alu	(96)	216	1	967055
1098	13.3	21.6	2.0	chr12	120430351	120430456	(12844853)	+	AluJb	SINE/Alu	144	310	(2)	967053
236	17.7	9.0	4.1	chr12	120430689	120430762	(12844547)	C	L2a	LINE/L2	(15)	3372	3277	967056
2239	7.5	1.7	0.7	chr12	120430807	120431100	(12844209)	C	AluSc8	SINE/Alu	(14)	297	1	967057
36	23.0	0.0	0.0	chr12	120649978	120650051	(12625258)	+	(TG)n	Simple_repeat	1	74	(0)	967597
2253	11.9	0.0	1.0	chr12	120815718	120816029	(12459280)	C	AluSx1	SINE/Alu	(3)	309	1	967910
986	17.6	1.2	0.0	chr12	120925544	120925708	(12349601)	+	AluJo	SINE/Alu	132	298	(14)	968123
1704	11.7	8.4	2.1	chr12	121209583	121209753	(12065556)	C	AluJr	SINE/Alu	(1)	311	139	968857
28	0.0	0.0	0.0	chr12	121209754	121209780	(12065529)	+	(T)n	Simple_repeat	1	27	(0)	968858
1704	11.7	8.4	2.1	chr12	121209781	121209899	(12065410)	C	AluJr	SINE/Alu	(174)	138	1	968857
1901	13.1	0.3	1.4	chr12	121210498	121210794	(12064515)	+	AluJr	SINE/Alu	1	294	(18)	968859
13	26.2	1.7	3.4	chr12	121626548	121626605	(11648704)	+	G-rich	Low_complexity	1	59	(0)	969869
12	24.0	2.6	0.0	chr12	121654229	121654267	(11621042)	+	G-rich	Low_complexity	1	40	(0)	969949
2278	11.6	0.0	0.0	chr12	121654591	121654893	(11620416)	C	AluSz	SINE/Alu	(5)	307	5	969950
369	18.5	0.0	0.0	chr12	121738271	121738351	(11536958)	+	L1ME3G	LINE/L1	837	917	(7)	970203
2050	17.6	2.2	0.6	chr12	121903126	121903484	(11371825)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	970636
266	27.7	20.4	1.0	chr12	121903539	121903731	(11371578)	+	L2b	LINE/L2	2988	3229	(158)	970637
2058	11.5	0.3	0.7	chr12	122031042	122031327	(11243982)	C	AluSx	SINE/Alu	(27)	285	1	970940
530	30.7	6.9	1.8	chr12	122031440	122031658	(11243651)	C	MIRb	SINE/MIR	(17)	251	21	970941
13	0.0	0.0	0.0	chr12	122204563	122204579	(11070730)	+	(CCG)n	Simple_repeat	1	17	(0)	971311
1870	19.8	4.8	0.5	chr12	123001317	123001717	(10273592)	C	L1MB5	LINE/L1	(6)	6168	5750	973120
25	25.9	3.6	3.5	chr12	123078017	123078128	(10197181)	+	GA-rich	Low_complexity	1	116	(0)	973267
18	13.5	0.0	0.0	chr12	123364774	123364806	(9910503)	+	(GCG)n	Simple_repeat	1	33	(0)	973884
12	20.0	0.0	0.0	chr12	123364841	123364869	(9910440)	+	(CGCCC)n	Simple_repeat	1	29	(0)	973885
15	24.3	1.8	3.5	chr12	123364930	123364986	(9910323)	+	(CTCC)n	Simple_repeat	1	58	(0)	973886
197	27.7	8.2	3.5	chr12	123908925	123909040	(9366269)	+	MER5B	DNA/hAT-Charlie	30	151	(27)	975174
208	35.4	3.8	5.9	chr12	124453413	124453547	(8821762)	C	L2	LINE/L2	(1882)	1537	1406	976085
12	13.7	2.7	5.3	chr12	124863531	124863567	(8411742)	+	(CCCGGCG)n	Simple_repeat	1	38	(0)	976995
12	14.1	10.0	4.5	chr12	124863641	124863700	(8411609)	+	(ACAGCGC)n	Simple_repeat	1	66	(0)	976996
18	4.8	0.0	0.0	chr12	125330330	125330351	(7944958)	+	(T)n	Simple_repeat	1	22	(0)	978049
344	26.7	10.1	5.1	chr12	126993761	126994069	(6281240)	+	MLT1J1	LTR/ERVL-MaLR	5	331	(117)	980736
621	26.3	5.5	0.5	chr12	126994078	126994268	(6281041)	C	Ricksha_c	DNA/MULE-MuDR	(1143)	905	705	980737
25	5.3	0.0	4.7	chr12	127165863	127165905	(6109404)	+	(TTTTTA)n	Simple_repeat	1	43	(0)	981017
1856	4.6	4.2	0.2	chr12	127165908	127166171	(6109138)	C	LSU-rRNA_Hsa	rRNA	(1)	5034	4720	981018
134	1.9	3.0	2.3	chr12	127166172	127166337	(6108972)	+	(CCGAGGCCGA)n	Simple_repeat	1	171	(0)	981019
923	3.3	12.7	1.3	chr12	127166338	127166442	(6108867)	C	LSU-rRNA_Hsa	rRNA	(316)	4719	4612	981018
622	30.5	12.1	1.6	chr12	128838662	128839144	(4436165)	+	L1ME4a	LINE/L1	5488	5871	(253)	983965
2211	25.9	2.9	1.5	chr12	128839145	128839759	(4435550)	C	MLT1E3	LTR/ERVL-MaLR	(0)	624	1	983966
386	31.0	5.7	5.3	chr12	130330780	130331079	(2944230)	C	Charlie7	DNA/hAT-Charlie	(2096)	516	216	986568
266	28.5	4.4	0.8	chr12	130781660	130781766	(2493543)	C	MIR	SINE/MIR	(0)	268	158	987202
1026	14.4	18.5	1.9	chr12	130871186	130871400	(2403909)	+	AluJr	SINE/Alu	37	295	(17)	987384
14	5.0	0.0	0.0	chr12	130871534	130871554	(2403755)	+	(CATT)n	Simple_repeat	1	21	(0)	987385
510	24.2	0.0	11.0	chr12	131310041	131310240	(1965069)	C	L1MA4	LINE/L1	(8)	6292	6115	987985
4037	6.9	1.9	0.0	chr12	131551368	131551877	(1723432)	C	MER41C	LTR/ERV1	(1)	520	1	988269
504	22.9	10.3	5.4	chr12	131687235	131687474	(1587835)	+	MER45C	DNA/hAT-Tip100	79	331	(622)	988449
229	29.4	6.6	0.0	chr12	131687486	131687570	(1587739)	+	MER45C	DNA/hAT-Tip100	308	398	(555)	988450
234	21.5	4.4	4.4	chr12	131687755	131687822	(1587487)	C	MIRb	SINE/MIR	(197)	71	4	988451
605	25.3	1.7	3.8	chr12	131688072	131688290	(1587019)	+	MSTC	LTR/ERVL-MaLR	1	238	(219)	988452
742	34.8	11.2	8.1	chr12	132059196	132059732	(1215577)	+	L1MEd	LINE/L1	276	823	(6263)	989031
719	27.9	14.1	0.5	chr12	132208410	132208819	(1066490)	+	MLT1H	LTR/ERVL-MaLR	75	549	(0)	989215
226	21.1	9.5	1.6	chr12	132229122	132229243	(1046066)	+	L2a	LINE/L2	3035	3172	(254)	989240
240	29.8	9.5	1.7	chr12	132229290	132229405	(1045904)	+	L2a	LINE/L2	3301	3426	(0)	989241
241	30.1	0.0	0.0	chr12	132356615	132356687	(918622)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	523	989368
203	29.6	3.6	4.7	chr12	132356933	132357017	(918292)	+	MER131	DNA?	63	146	(69)	989369
217	36.3	10.9	0.9	chr12	132398818	132399031	(876278)	+	MIR	SINE/MIR	14	251	(11)	989409
1030	14.7	2.3	0.0	chr12	132616095	132616264	(659045)	C	MER57A-int	LTR/ERV1	(1357)	4830	4657	989676
16	23.9	0.0	8.6	chr12	133037457	133037537	(237772)	+	G-rich	Low_complexity	1	81	(0)	990398
264	22.2	0.0	0.0	chr12	133037947	133037991	(237318)	C	Alu	SINE/Alu	(88)	45	1	990399
4356	18.2	3.0	3.8	chr12	133093979	133095471	(179838)	C	HERVK-int	LTR/ERVK	(6840)	696	1	990499
12	15.6	3.5	0.0	chr12	133130499	133130527	(144782)	+	(GTGT)n	Simple_repeat	1	30	(0)	990566
1243	10.1	0.0	0.0	chr12	133183354	133183512	(91797)	+	AluSx	SINE/Alu	137	295	(17)	990657
203	35.1	5.0	1.7	chr12	133183528	133183701	(91608)	C	L2	LINE/L2	(787)	2632	2453	990658
12	16.9	5.9	0.0	chr13	18955497	18955530	(95408798)	+	(CATG)n	Simple_repeat	1	36	(0)	991767
825	16.5	4.1	4.7	chr13	20119424	20119572	(94244756)	+	AluJb	SINE/Alu	137	286	(26)	993782
1962	19.6	4.9	1.4	chr13	20482885	20483319	(93881009)	+	L1MA4	LINE/L1	5838	6288	(12)	994316
2100	10.4	4.2	0.7	chr13	20564909	20565206	(93799122)	+	AluY	SINE/Alu	1	309	(2)	994491
3212	9.3	4.7	3.2	chr13	20565207	20565620	(93798708)	+	LTR10F	LTR/ERV1	88	509	(2)	994490
1330	17.2	9.7	2.9	chr13	20565621	20565827	(93798501)	C	MLT2D	LTR/ERVL	(90)	324	87	994489
14982	9.7	2.0	0.7	chr13	21407292	21411317	(92953011)	C	L1PA7	LINE/L1	(639)	5830	8	996041
428	31.4	7.3	4.0	chr13	21411394	21411592	(92952736)	C	MIR3	SINE/MIR	(1)	207	2	996043
982	30.4	8.2	4.3	chr13	22531916	22532633	(91831695)	+	L1ME2	LINE/L1	1262	2009	(4406)	997584
461	25.9	0.9	1.8	chr13	22532635	22532748	(91831580)	C	MER5A	DNA/hAT-Charlie	(65)	124	12	997586
7628	1.9	0.3	1.2	chr13	22532750	22533755	(91830573)	C	L1PA3	LINE/L1	(0)	6155	5188	997587
12541	9.5	0.9	2.1	chr13	23282872	23286072	(91078256)	C	L1P3	LINE/L1	(3250)	3211	1	998619
16	10.4	3.2	0.0	chr13	23375639	23375669	(90988659)	+	(CCGCC)n	Simple_repeat	1	32	(0)	998746
2220	21.6	9.8	0.2	chr13	23445419	23445932	(90918396)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	998858
231	25.0	1.8	0.0	chr13	23445959	23446014	(90918314)	+	MLT1N2	LTR/ERVL-MaLR	9	65	(497)	998859
277	28.6	2.3	0.0	chr13	23446273	23446356	(90917972)	+	MLT1N2	LTR/ERVL-MaLR	437	522	(40)	998859
451	9.2	0.0	1.3	chr13	23446432	23446505	(90917823)	C	L1PA3	LINE/L1	(1006)	5140	5072	998860
3327	18.2	9.6	2.0	chr13	24983475	24984185	(89380143)	+	MER21A	LTR/ERVL	1	771	(160)	1001113
26845	4.2	0.5	0.1	chr13	25893049	25899177	(88465151)	C	L1PA4	LINE/L1	(0)	6155	2	1002444
12369	8.8	0.9	0.2	chr13	25953559	25955156	(88409172)	+	L1PA7	LINE/L1	8	1616	(4845)	1002525
6108	8.8	2.5	1.8	chr13	27125487	27126431	(87237897)	+	L1P2	LINE/L1	5	956	(5228)	1004359
4114	14.2	6.5	1.7	chr13	27614939	27615742	(86748586)	C	MER21B	LTR/ERVL	(23)	845	1	1005243
17	22.4	2.1	0.0	chr13	28028068	28028089	(86336239)	+	A-rich	Low_complexity	1	45	(0)	1005947
20	0.0	0.0	0.0	chr13	28028090	28028111	(86336217)	+	(AG)n	Simple_repeat	1	22	(0)	1005948
21969	12.1	2.2	1.3	chr13	28688078	28694338	(85669990)	C	L1PA7	LINE/L1	(0)	6339	12	1007171
1652	24.1	5.9	3.0	chr13	28958996	28959450	(85404878)	+	L1MB7	LINE/L1	143	623	(6010)	1007551
1062	32.6	7.0	3.7	chr13	29400879	29400982	(84963346)	C	L1M5	LINE/L1	(818)	5328	5226	1008104
2044	14.6	0.7	5.6	chr13	29400983	29401303	(84963025)	C	AluSx	SINE/Alu	(7)	305	1	1008105
1062	32.6	7.0	3.7	chr13	29401304	29402003	(84962325)	C	L1M5	LINE/L1	(921)	5225	4496	1008104
1102	31.1	14.4	5.0	chr13	29732519	29733877	(84630451)	+	L2b	LINE/L2	1859	3369	(6)	1008539
666	0.0	0.0	0.0	chr13	30673964	30674037	(83690291)	C	tRNA-Asn-AAC	tRNA	(3)	74	1	1010174
370	23.4	10.3	9.1	chr13	30674562	30674782	(83689546)	C	MER106A	DNA/hAT-Charlie	(11)	225	2	1010175
2150	12.3	0.0	0.0	chr13	30680522	30680814	(83683514)	C	AluSz	SINE/Alu	(19)	293	1	1010187
13	17.9	5.5	3.5	chr13	30680815	30680826	(83683502)	+	(TTAT)n	Simple_repeat	1	11	(0)	1010188
1045	13.6	0.0	0.0	chr13	30681117	30681271	(83683057)	C	AluJo	SINE/Alu	(3)	309	155	1010189
15	9.7	0.0	0.0	chr13	30887036	30887057	(83477271)	+	(CA)n	Simple_repeat	1	22	(0)	1010541
1087	28.5	6.1	3.4	chr13	30887107	30887694	(83476634)	C	HAL1ME	LINE/L1	(677)	1788	1184	1010542
18	24.2	0.0	0.0	chr13	32427992	32428040	(81936288)	+	(GCGGCT)n	Simple_repeat	1	49	(0)	1012750
25167	6.3	1.5	0.2	chr13	32602093	32608174	(81756154)	C	L1PA5	LINE/L1	(0)	6154	6	1013084
8589	4.3	0.5	21.9	chr13	32720649	32722378	(81641950)	C	SVA_B	Retroposon/SVA	(6)	1377	21	1013262
6805	10.7	0.3	1.5	chr13	34054230	34055239	(80309089)	C	L1PA8	LINE/L1	(5454)	1007	10	1015234
967	19.9	6.8	0.0	chr13	36813961	36814166	(77550162)	+	L1ME1	LINE/L1	5710	5930	(249)	1019099
4399	14.0	2.4	0.7	chr13	36814168	36814866	(77549462)	+	MER50	LTR/ERV1	1	711	(23)	1019100
2375	17.9	12.4	0.6	chr13	36870613	36871096	(77493232)	C	MER44B	DNA/TcMar-Tigger	(0)	550	2	1019194
225	34.9	1.1	0.0	chr13	36871100	36871185	(77493143)	+	L2a	LINE/L2	3339	3425	(1)	1019195
2303	12.6	0.0	0.0	chr13	36871236	36871545	(77492783)	+	AluSx	SINE/Alu	1	310	(2)	1019196
482	27.4	11.0	0.0	chr13	36886065	36886250	(77478078)	C	MIR	SINE/MIR	(49)	213	5	1019223
10147	16.6	4.8	2.2	chr13	38264363	38265817	(76098511)	+	L1PA10	LINE/L1	10	1488	(4973)	1021032
193	32.7	3.5	0.0	chr13	39777048	39777102	(74587226)	C	MIRb	SINE/MIR	(23)	245	189	1023129
394	35.5	5.3	2.1	chr13	39777098	39777333	(74586995)	C	L2c	LINE/L2	(19)	3368	3125	1023130
3074	10.3	1.4	9.7	chr13	39789370	39789927	(74574401)	+	LTR10F	LTR/ERV1	1	511	(0)	1023147
339	37.5	3.9	6.1	chr13	40471892	40472050	(73892278)	C	MIR	SINE/MIR	(6)	256	112	1024163
2072	12.7	3.6	3.6	chr13	40472051	40472386	(73891942)	+	MER1B	DNA/hAT-Charlie	4	339	(0)	1024164
2041	18.8	3.2	5.6	chr13	41427055	41431198	(72933130)	+	SATR2	Satellite	1	4047	(47)	1025852
2189	19.2	3.1	2.6	chr13	41443733	41453475	(72910853)	C	SATR2	Satellite	(168)	8752	1	1025871
186	35.6	6.5	0.0	chr13	42244174	42244260	(72120068)	C	L2c	LINE/L2	(1048)	2371	2279	1027057
355	23.3	0.8	1.6	chr13	42244264	42244380	(72119948)	C	LTR50	LTR/ERVL	(236)	559	367	1027059
296	23.7	7.6	0.0	chr13	42244474	42244570	(72119758)	C	LTR50	LTR/ERVL	(673)	122	18	1027059
21345	10.2	1.8	1.3	chr13	42770916	42777405	(71586923)	C	L1PA7	LINE/L1	(2)	6467	8	1027873
1146	23.2	3.9	4.2	chr13	42984976	42985128	(71379200)	C	LTR16B1	LTR/ERVL	(0)	480	332	1028196
2244	14.2	8.4	2.9	chr13	42985129	42985542	(71378786)	C	MER65A	LTR/ERV1	(4)	441	3	1028197
2408	22.0	9.5	7.6	chr13	43036328	43037168	(71327160)	C	MER52A	LTR/ERV1	(782)	973	4	1028310
713	28.4	8.4	3.3	chr13	43037176	43037535	(71326793)	+	CR1_Mam	LINE/CR1	447	826	(1378)	1028311
1625	14.7	0.0	13.0	chr13	45061320	45061665	(69302663)	+	AluJb	SINE/Alu	1	301	(11)	1031475
2059	11.7	0.7	0.3	chr13	45061916	45062197	(69302131)	+	AluSz	SINE/Alu	1	283	(29)	1031476
12630	11.1	0.8	3.3	chr13	46407148	46409554	(67954774)	C	L1P3	LINE/L1	(4093)	2406	1	1033860
8917	2.9	0.1	17.8	chr13	49761202	49762874	(64601454)	+	SVA_C	Retroposon/SVA	1	1377	(7)	1038986
12710	9.8	0.8	1.8	chr13	49879092	49880687	(64483641)	+	L1PA8	LINE/L1	8	1594	(4867)	1039247
3558	12.4	6.6	7.6	chr13	49998587	49998681	(64365647)	+	LTR9C	LTR/ERV1	3	88	(578)	1039474
1963	9.2	1.1	0.8	chr13	49998682	49998942	(64365386)	+	AluSz	SINE/Alu	36	297	(15)	1039475
14	5.0	0.0	0.0	chr13	50125825	50125845	(64238483)	+	(GGC)n	Simple_repeat	1	21	(0)	1039668
12	23.1	3.7	3.6	chr13	50125846	50125875	(64238453)	+	(CGCGGC)n	Simple_repeat	4	56	(0)	1039669
266	23.9	9.3	1.1	chr13	50417705	50417793	(63946535)	C	MLT1O	LTR/ERVL-MaLR	(321)	221	125	1040101
24977	4.8	0.4	0.1	chr13	50503045	50509169	(63855159)	C	L1PA4	LINE/L1	(3)	6152	13	1040235
12	30.4	1.7	1.7	chr13	50909720	50909777	(63454551)	+	(GCGCC)n	Simple_repeat	1	59	(0)	1040827
24644	5.6	0.4	0.0	chr13	51509718	51515838	(62848490)	C	L1PA5	LINE/L1	(0)	6154	9	1041707
26616	6.0	0.3	0.3	chr13	51567036	51571648	(62792680)	+	L1PA4	LINE/L1	11	4631	(1515)	1041790
334	33.3	5.5	0.6	chr13	51845543	51845699	(62518629)	+	L3	LINE/CR1	3786	3950	(149)	1042187
21	23.8	0.0	5.3	chr13	52450369	52450444	(61913884)	+	(GCCGG)n	Simple_repeat	1	76	(0)	1043131
27	0.0	0.0	0.0	chr13	52600454	52600479	(61763849)	+	(GCCCA)n	Simple_repeat	1	26	(0)	1043341
53	0.0	0.0	0.0	chr13	52965868	52965912	(61398416)	+	(AC)n	Simple_repeat	1	45	(0)	1043974
1305	20.4	12.3	2.7	chr13	54098014	54098381	(60265947)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	1045497
22315	10.1	1.2	0.9	chr13	57229645	57236064	(57128264)	+	L1PA7	LINE/L1	1	6465	(4)	1049299
21703	9.2	0.9	1.3	chr13	59291393	59297848	(55066480)	+	L1PA7	LINE/L1	2	6469	(0)	1051868
1046	24.6	0.4	0.8	chr13	59376573	59376822	(54987506)	C	MER87	LTR/ERV1	(0)	541	293	1052007
11934	11.9	1.8	0.7	chr13	59376845	59380143	(54984185)	+	L1PA7	LINE/L1	8	3340	(3121)	1052008
23472	7.0	1.5	0.3	chr13	59590683	59596761	(54767567)	+	L1PA6	LINE/L1	5	6141	(13)	1052310
16	21.1	0.0	0.0	chr13	59971012	59971049	(54393279)	+	GA-rich	Low_complexity	1	38	(0)	1052811
26161	3.6	0.1	0.1	chr13	60245896	60252051	(54112277)	C	L1PA3	LINE/L1	(1)	6154	1	1053237
8039	17.0	6.5	12.1	chr13	60258260	60258962	(54105366)	C	L1MD1	LINE/L1	(2793)	3744	3306	1053243
27600	2.8	0.1	0.1	chr13	60709753	60715784	(53648544)	+	L1PA3	LINE/L1	124	6155	(0)	1053907
26385	4.8	0.2	0.1	chr13	60827202	60833346	(53530982)	C	L1PA4	LINE/L1	(3)	6152	1	1054050
2259	18.1	10.0	3.5	chr13	61221577	61225331	(53138997)	+	SATR1	Satellite	5485	9812	(0)	1054539
1889	21.2	1.2	6.7	chr13	61764778	61765227	(52599101)	+	MSTB	LTR/ERVL-MaLR	2	426	(0)	1055164
6961	17.9	8.6	7.7	chr13	61765292	61767029	(52597299)	C	MER52A	LTR/ERV1	(0)	1755	1	1055165
1008	29.8	9.1	6.9	chr13	61940696	61941098	(52423230)	C	L1ME1	LINE/L1	(5565)	571	160	1055380
380	34.1	7.8	6.0	chr13	61941084	61941563	(52422765)	C	L1MEa	LINE/L1	(5570)	500	12	1055384
19857	10.9	3.7	0.6	chr13	62398920	62401879	(51962449)	+	PRIMA41-int	LTR/ERV1	3	3055	(4701)	1055957
1017	17.1	0.5	4.3	chr13	63001566	63001773	(51362555)	+	L1PB1	LINE/L1	1	200	(6663)	1056701
9409	13.9	4.1	0.8	chr13	63001753	63004250	(51360078)	+	L1PB1	LINE/L1	811	3399	(3463)	1056701
3736	17.4	10.4	0.0	chr13	63435584	63436318	(50928010)	C	LTR8B	LTR/ERV1	(0)	820	1	1057274
334	33.2	10.6	7.0	chr13	63739378	63739649	(50624679)	+	L1MDa	LINE/L1	423	705	(5928)	1057671
384	33.3	11.4	9.3	chr13	63740994	63742131	(50622197)	+	L1MDa	LINE/L1	403	1004	(5629)	1057671
3974	11.6	0.3	0.7	chr13	63839746	63840345	(50523983)	+	HERVE-int	LTR/ERV1	3249	3846	(3967)	1057796
345	29.9	8.8	16.9	chr13	63840356	63840839	(50523489)	+	L1M4b	LINE/L1	295	735	(6132)	1057797
354	34.0	11.2	10.7	chr13	63840705	63841192	(50523136)	C	L1MDa	LINE/L1	(5661)	972	482	1057798
3992	11.4	0.5	1.0	chr13	63843245	63843845	(50520483)	+	HERVE-int	LTR/ERV1	3249	3846	(3967)	1057802
2268	7.8	0.0	1.1	chr13	65209293	65209601	(49154727)	C	AluY	SINE/Alu	(0)	311	1	1059492
1718	16.1	15.7	0.6	chr13	65209643	65210005	(49154323)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1059493
11881	20.0	4.3	2.1	chr13	65335996	65338716	(49025612)	+	L1P4a	LINE/L1	6	2791	(3692)	1059682
23822	7.8	1.3	0.4	chr13	65435414	65441515	(48922813)	+	L1PA6	LINE/L1	175	6316	(11)	1059820
2170	13.0	1.3	0.7	chr13	65450718	65451017	(48913311)	C	AluSx	SINE/Alu	(10)	302	1	1059831
20307	9.1	0.8	0.5	chr13	65670906	65675955	(48688373)	C	L1P2	LINE/L1	(1090)	5056	8	1060097
5780	29.9	3.4	3.7	chr13	65675956	65677991	(48686337)	C	L1MA9	LINE/L1	(5135)	2431	403	1060095
3444	19.8	8.2	2.4	chr13	65747379	65748087	(48616241)	C	L1MB2	LINE/L1	(9)	6660	5884	1060170
5382	10.3	0.4	0.8	chr13	65748088	65748870	(48615458)	C	LTR17	LTR/ERV1	(0)	780	1	1060171
25899	3.6	0.1	0.0	chr13	66253763	66259788	(48104540)	C	L1PA3	LINE/L1	(0)	6155	125	1060805
2219	12.2	0.0	0.7	chr13	66583331	66583634	(47780694)	+	AluSc8	SINE/Alu	1	302	(9)	1061220
1615	19.2	2.8	0.0	chr13	66935075	66935355	(47428973)	C	AluJb	SINE/Alu	(23)	289	1	1061642
23	25.0	1.8	0.0	chr13	67230277	67230331	(47133997)	+	(CT)n	Simple_repeat	1	56	(0)	1062005
17336	7.9	0.3	1.0	chr13	67452275	67456207	(46908121)	+	L1PA6	LINE/L1	1	3885	(2261)	1062302
2128	14.5	0.0	0.0	chr13	67530135	67530431	(46833897)	+	AluSx1	SINE/Alu	1	297	(15)	1062384
2150	17.6	4.2	3.1	chr13	67883557	67883977	(46480351)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1062828
1926	21.6	3.9	1.6	chr13	67912018	67914966	(46449362)	C	SATR2	Satellite	(168)	2609	1	1062863
1516	21.3	8.9	3.6	chr13	67915011	67915889	(46448439)	C	SATR1	Satellite	(65)	911	1	1062864
1149	16.3	1.9	0.0	chr13	67920211	67920412	(46443916)	+	L1PA17	LINE/L1	5960	6165	(1)	1062872
3031	15.6	2.9	2.0	chr13	67920415	67920969	(46443359)	+	MER6A	DNA/TcMar-Tigger	46	605	(0)	1062873
1687	23.8	2.4	2.6	chr13	68365338	68365759	(45998569)	C	MLT1B-int	LTR/ERVL-MaLR	(0)	1735	1315	1063450
1415	20.7	1.9	3.1	chr13	68365850	68365926	(45998402)	C	MLT1B-int	LTR/ERVL-MaLR	(803)	568	493	1063452
1385	13.4	2.6	3.0	chr13	68365927	68366157	(45998171)	+	MER30	DNA/hAT-Charlie	1	230	(0)	1063453
21292	10.9	1.7	2.8	chr13	68793721	68796343	(45567985)	C	L1PA7	LINE/L1	(3831)	2630	1	1063989
2174	19.1	13.7	2.8	chr13	70986790	70987352	(43376976)	+	LTR27C	LTR/ERV1	1	767	(0)	1066872
9318	7.4	0.5	0.1	chr13	71184295	71185509	(43178819)	+	L1P2	LINE/L1	532	1737	(4952)	1067133
27116	3.9	0.1	0.1	chr13	71384561	71390704	(42973624)	C	L1PA3	LINE/L1	(0)	6155	14	1067389
26265	4.8	0.3	0.1	chr13	72265483	72271624	(42092704)	C	L1PA4	LINE/L1	(3)	6152	2	1068564
18	14.6	2.6	0.0	chr13	72727555	72727592	(41636736)	+	(CGC)n	Simple_repeat	1	39	(0)	1069242
276	37.0	4.8	0.0	chr13	72781432	72781550	(41582778)	+	MIRc	SINE/MIR	13	137	(131)	1069318
1438	24.9	5.9	1.0	chr13	73613450	73613835	(40750493)	C	LTR40b	LTR/ERVL	(4)	458	53	1070830
2616	6.9	1.0	0.3	chr13	73613867	73614172	(40750156)	C	AluY	SINE/Alu	(3)	308	1	1070831
211	27.1	7.8	8.3	chr13	74094383	74094563	(40269765)	+	L2b	LINE/L2	3190	3369	(18)	1071496
2302	13.2	0.0	0.0	chr13	74094590	74094899	(40269429)	C	AluSx1	SINE/Alu	(2)	310	1	1071497
19	12.4	0.0	0.0	chr13	74134159	74134193	(40230135)	+	(TGGGG)n	Simple_repeat	1	35	(0)	1071556
17	13.3	0.0	0.0	chr13	74134277	74134309	(40230019)	+	(GGGGCG)n	Simple_repeat	1	33	(0)	1071557
25	26.4	3.1	2.0	chr13	74134473	74134570	(40229758)	+	(CCCGC)n	Simple_repeat	1	101	(0)	1071558
23161	11.0	1.8	1.6	chr13	74346304	74352730	(40011598)	+	L1PA8	LINE/L1	10	6481	(6)	1071842
13	10.8	3.1	3.0	chr13	74575874	74575905	(39788423)	+	(CCGGC)n	Simple_repeat	1	33	(0)	1072129
1644	21.6	3.6	4.9	chr13	75187973	75188484	(39175844)	+	L1MD2	LINE/L1	4050	4554	(1983)	1072945
389	21.1	0.0	5.2	chr13	75188473	75188587	(39175741)	+	L1MD2	LINE/L1	5014	5122	(1415)	1072945
344	20.8	2.5	3.8	chr13	75188588	75188667	(39175661)	+	MLT1D	LTR/ERVL-MaLR	1	79	(426)	1072951
35	5.4	0.0	0.0	chr13	75480868	75480906	(38883422)	+	(CA)n	Simple_repeat	1	39	(0)	1073408
19	13.9	3.9	3.8	chr13	75482400	75482450	(38881878)	+	(TCCT)n	Simple_repeat	1	53	(0)	1073409
2039	14.9	1.0	2.2	chr13	76947752	76948067	(37416261)	C	AluJr	SINE/Alu	(0)	312	1	1075486
12	25.8	1.9	3.6	chr13	76992139	76992192	(37372136)	+	(GGCGCG)n	Simple_repeat	1	55	(0)	1075557
28	26.9	2.1	1.0	chr13	77026662	77026756	(37337572)	+	(CCGCC)n	Simple_repeat	1	97	(0)	1075600
27303	2.9	0.1	0.1	chr13	77199028	77205061	(37159267)	+	L1PA3	LINE/L1	124	6155	(0)	1075833
26	0.0	0.0	0.0	chr13	77326779	77326803	(37037525)	+	(CGC)n	Simple_repeat	1	25	(0)	1076032
20	13.0	0.0	0.0	chr13	77326918	77326952	(37037376)	+	(CCT)n	Simple_repeat	1	35	(0)	1076033
19	24.8	0.0	0.0	chr13	77327025	77327070	(37037258)	+	(GCC)n	Simple_repeat	1	46	(0)	1076034
12	21.9	1.9	5.6	chr13	77698385	77698437	(36665891)	+	G-rich	Low_complexity	1	54	(0)	1076570
404	26.3	5.7	3.6	chr13	77717583	77717720	(36646608)	C	MLT1L	LTR/ERVL-MaLR	(319)	291	151	1076583
559	26.3	9.5	1.3	chr13	77717724	77717877	(36646451)	+	MER5A	DNA/hAT-Charlie	2	169	(20)	1076584
2268	10.4	0.0	0.0	chr13	78023659	78023938	(36340390)	C	AluSq	SINE/Alu	(32)	281	2	1076970
531	32.5	5.9	10.3	chr13	78023939	78024101	(36340227)	C	L2b	LINE/L2	(600)	2819	2656	1076969
811	23.9	6.6	1.5	chr13	78024116	78024387	(36339941)	C	L1MC5	LINE/L1	(11)	9293	9007	1076971
5094	11.0	2.9	0.8	chr13	78059081	78059843	(36304485)	+	LTR17	LTR/ERV1	1	780	(0)	1077022
9213	13.0	3.8	2.9	chr13	78059844	78061692	(36302636)	C	L1PBa1	LINE/L1	(4621)	2242	373	1077021
777	25.9	9.9	2.6	chr13	78525718	78526062	(35838266)	+	HAL1	LINE/L1	1553	1925	(582)	1077674
25313	6.8	0.7	0.1	chr13	78526072	78532199	(35832129)	+	L1PA5	LINE/L1	4	6154	(0)	1077675
15	23.9	0.9	4.4	chr13	78603149	78603224	(35761104)	+	G-rich	Low_complexity	1	73	(0)	1077763
20	25.9	1.4	2.7	chr13	78603413	78603484	(35760844)	+	(GCT)n	Simple_repeat	1	73	(0)	1077764
8908	10.1	2.5	0.5	chr13	78865885	78867218	(35497110)	+	L1P2	LINE/L1	4	1364	(4820)	1078135
18	10.5	0.0	0.0	chr13	79481622	79481652	(34882676)	+	(TTTGT)n	Simple_repeat	1	31	(0)	1079007
220	36.4	1.1	5.2	chr13	80106490	80106683	(34257645)	+	L2a	LINE/L2	3052	3237	(189)	1079783
641	33.5	10.3	4.0	chr13	80106814	80107294	(34257034)	+	L2a	LINE/L2	2910	3424	(2)	1079784
416	34.0	8.9	7.9	chr13	80705457	80705923	(33658405)	C	L1MDa	LINE/L1	(5689)	944	409	1080627
602	31.1	9.5	0.8	chr13	80762860	80763146	(33601182)	C	L2a	LINE/L2	(311)	3115	2803	1080700
22542	11.1	2.2	1.1	chr13	81362261	81365375	(32998953)	+	L1PA7	LINE/L1	11	3156	(3305)	1081462
4981	11.5	5.8	0.5	chr13	81520952	81522271	(32842057)	C	HUERS-P3b-int	LTR/ERV1	(5126)	2292	902	1081662
26791	3.9	0.3	0.1	chr13	82229019	82235152	(32129176)	+	L1PA3	LINE/L1	9	6152	(3)	1082504
40863	15.7	3.1	0.9	chr13	82324519	82330593	(32033735)	+	HUERS-P3-int	LTR/ERV1	744	6911	(2008)	1082622
12	16.8	2.8	2.7	chr13	82828735	82828770	(31535558)	+	(GATGAA)n	Simple_repeat	1	37	(0)	1083243
4650	18.2	8.4	4.7	chr13	82828785	82829764	(31534564)	C	LTR28	LTR/ERV1	(0)	1020	1	1083244
4653	15.7	4.1	0.1	chr13	83199695	83200485	(31163843)	+	LTR1B	LTR/ERV1	1	824	(0)	1083714
6247	17.0	0.4	0.0	chr13	83621647	83622617	(30741711)	+	LTR1D	LTR/ERV1	1	975	(0)	1084204
4703	13.6	3.4	2.4	chr13	84720054	84720842	(29643486)	+	LTR1A1	LTR/ERV1	1	797	(2)	1085608
1717	26.7	10.3	1.1	chr13	84720908	84721671	(29642657)	C	L1MC4	LINE/L1	(112)	7930	7088	1085609
7725	16.8	1.9	1.7	chr13	84927204	84928690	(29435638)	+	L1P3b	LINE/L1	1122	2619	(4362)	1085866
1058	33.4	0.4	1.8	chr13	87923772	87924200	(26440128)	+	MER77	LTR/ERVL	159	604	(0)	1089669
421	30.3	6.3	3.3	chr13	88135879	88136114	(26228214)	C	MIR	SINE/MIR	(4)	258	17	1089940
735	17.8	8.0	1.1	chr13	88339278	88339550	(26024778)	+	LTR18C	LTR/ERVL	1	390	(224)	1090190
1538	21.3	10.5	1.3	chr13	88339588	88339967	(26024361)	C	L1PA12	LINE/L1	(6352)	1189	771	1090191
252	36.6	7.7	6.8	chr13	89087460	89087884	(25276444)	C	L2	LINE/L2	(963)	2456	2028	1091140
27552	2.4	0.1	0.2	chr13	89087886	89093918	(25270410)	+	L1PA2	LINE/L1	124	6155	(0)	1091141
2149	10.6	0.6	6.3	chr13	89427804	89428134	(24936194)	+	AluSx1	SINE/Alu	1	312	(0)	1091586
10615	23.6	2.5	3.9	chr13	89428135	89428897	(24935431)	C	L1PA10	LINE/L1	(5801)	2362	2195	1091585
30105	13.1	3.6	3.6	chr13	89909386	89910200	(24454128)	+	LOR1-int	LTR/ERV1	2736	3567	(4553)	1092255
3747	19.0	9.0	13.9	chr13	89910201	89911229	(24453099)	C	LTR28B	LTR/ERV1	(0)	974	1	1092257
27120	2.6	0.2	0.0	chr13	90663983	90669995	(23694333)	+	L1PA3	LINE/L1	124	6142	(13)	1093218
1427	20.1	9.5	4.9	chr13	91319419	91319827	(23044501)	+	Tigger2a	DNA/TcMar-Tigger	3	432	(2)	1094100
14	27.5	1.7	3.3	chr13	91348957	91349016	(23015312)	+	(CGC)n	Simple_repeat	1	61	(0)	1094137
24529	4.8	0.9	0.1	chr13	91433202	91438993	(22925335)	C	L1PA4	LINE/L1	(0)	6155	317	1094249
191	30.0	2.0	0.0	chr13	92175342	92175391	(22188937)	+	L2a	LINE/L2	3364	3414	(12)	1095246
2745	7.7	1.6	0.3	chr13	92839306	92839683	(21524645)	C	L1PA13	LINE/L1	(7)	6156	5774	1096070
646	15.5	5.2	0.0	chr13	92839685	92839813	(21524515)	+	L1PREC2	LINE/L1	3181	3316	(2830)	1096071
527	28.5	12.6	2.7	chr13	93069669	93069958	(21294370)	+	L1ME4a	LINE/L1	5536	5714	(410)	1096398
2517	11.2	1.3	2.6	chr13	93069959	93070344	(21293984)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1096399
2114	23.0	9.2	3.9	chr13	93091816	93097070	(21267258)	+	SATR1	Satellite	1	5534	(43)	1096429
2827	20.7	0.0	6.7	chr13	94759421	94760120	(19604208)	C	L1PB	LINE/L1	(1490)	4656	4004	1098856
13	4.3	3.9	3.7	chr13	95301318	95301343	(19062985)	+	(GCCGG)n	Simple_repeat	1	27	(0)	1099755
1563	21.1	5.3	1.0	chr13	95906389	95906804	(18457524)	+	L1M4b	LINE/L1	1721	2155	(4712)	1100847
12499	7.9	3.5	0.0	chr13	95906810	95908490	(18455838)	+	L1PA6	LINE/L1	177	1917	(4440)	1100848
13036	16.2	4.0	1.0	chr13	95915579	95921361	(18442967)	+	L1PA11	LINE/L1	406	6359	(0)	1100854
2396	10.3	0.0	0.3	chr13	96067079	96067380	(18296948)	+	AluSc	SINE/Alu	1	301	(8)	1101048
27630	2.6	0.1	0.0	chr13	96326181	96332208	(18032120)	C	L1PA4	LINE/L1	(4)	6151	124	1101454
194	25.0	16.7	2.4	chr13	96332347	96332428	(18031900)	+	MIR3	SINE/MIR	46	141	(67)	1101455
387	20.9	0.0	3.2	chr13	97679919	97680012	(16684316)	C	MLT2E	LTR/ERVL	(506)	122	32	1103331
183	29.5	2.8	8.7	chr13	97680137	97680251	(16684077)	+	MamTip2	DNA/hAT-Tip100	59	166	(139)	1103332
5397	14.2	0.9	3.6	chr13	97680287	97680335	(16683993)	C	L1MC1	LINE/L1	(0)	6333	6292	1103333
314	34.5	2.5	4.6	chr13	97880194	97880433	(16483895)	+	Charlie15b	DNA/hAT-Charlie	825	1059	(2)	1103623
2201	12.9	0.0	0.6	chr13	98177365	98177675	(16186653)	+	AluSx	SINE/Alu	1	309	(3)	1104243
307	27.0	5.8	1.2	chr13	99176766	99176930	(15187398)	+	MIR	SINE/MIR	14	186	(76)	1105837
70	12.2	3.8	6.2	chr13	99177209	99177262	(15187066)	+	(TTTC)n	Simple_repeat	1	48	(0)	1105838
2702	3.0	1.3	0.0	chr13	99177263	99177567	(15186761)	C	AluYk2	SINE/Alu	(2)	309	1	1105839
12	11.2	6.9	0.0	chr13	99739288	99739316	(14625012)	+	GA-rich	Low_complexity	1	31	(0)	1106755
35	6.8	0.0	0.0	chr13	99985449	99985494	(14378834)	+	(GCG)n	Simple_repeat	1	46	(0)	1107144
8074	11.8	0.4	1.1	chr13	107042837	107043389	(7320939)	C	L1P3	LINE/L1	(5899)	562	7	1116884
2261	12.4	10.8	1.8	chr13	107074943	107075327	(7289001)	C	MSTA	LTR/ERVL-MaLR	(2)	426	3	1116929
309	30.0	8.5	2.0	chr13	108609344	108609496	(5754832)	+	L2b	LINE/L2	3212	3375	(0)	1119020
352	23.2	7.5	0.0	chr13	110869217	110869315	(3495013)	C	L1MC3	LINE/L1	(21)	7764	7658	1121884
141	35.2	2.5	2.7	chr13	110873652	110874508	(3489820)	+	(CA)n	Simple_repeat	1	878	(0)	1121889
12	22.6	4.2	2.0	chr13	110874579	110874626	(3489702)	+	(TCCAGC)n	Simple_repeat	1	50	(0)	1121890
2557	10.6	1.6	1.1	chr13	110949690	110950062	(3414266)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1121977
1552	22.6	4.6	1.6	chr13	112390385	112390487	(1973841)	C	MER72B	LTR/ERV1	(238)	530	431	1123444
2172	12.8	12.2	0.8	chr13	112390488	112390866	(1973462)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1123445
1552	22.6	4.6	1.6	chr13	112390867	112391144	(1973184)	C	MER72B	LTR/ERV1	(338)	430	137	1123444
237	24.5	8.2	2.9	chr13	113111331	113112657	(1251671)	+	(CACCTCA)n	Simple_repeat	1	1436	(0)	1124206
459	23.5	0.3	0.0	chr13	113391653	113391785	(972543)	C	L1MB1	LINE/L1	(358)	5942	5809	1124630
1788	15.5	2.9	0.0	chr13	113392076	113392339	(971989)	C	AluSx1	SINE/Alu	(40)	272	1	1124631
201	18.9	0.0	0.0	chr13	113445270	113445306	(919022)	C	MIRc	SINE/MIR	(142)	126	90	1124701
15	20.5	0.0	2.4	chr13	113445605	113445645	(918683)	+	G-rich	Low_complexity	1	41	(0)	1124702
498	15.9	15.9	1.5	chr13	113453843	113453976	(910352)	C	L1MB5	LINE/L1	(182)	5992	5836	1124709
344	28.0	4.0	4.7	chr13	113754326	113754475	(609853)	+	MLT1G1	LTR/ERVL-MaLR	154	302	(293)	1124994
540	23.5	5.5	0.7	chr13	113754500	113754653	(609675)	+	MLT1G1	LTR/ERVL-MaLR	416	577	(2)	1124994
443	28.3	9.2	6.6	chr13	113810465	113810812	(553516)	C	MLT2D	LTR/ERVL	(0)	414	57	1125043
184	30.6	4.6	0.0	chr14	18668138	18668199	(88375519)	+	L2b	LINE/L2	3309	3373	(2)	1126017
13	21.3	2.2	2.2	chr14	21522994	21523038	(85520680)	+	(CCTTTCT)n	Simple_repeat	1	46	(0)	1129918
13	0.0	0.0	0.0	chr14	21523200	21523216	(85520502)	+	(GGT)n	Simple_repeat	1	17	(0)	1129919
2290	23.5	1.5	6.8	chr14	21590609	21590749	(85452969)	+	L1MA4	LINE/L1	3039	3167	(4398)	1130078
2084	14.3	0.0	1.0	chr14	21590750	21591063	(85452655)	+	AluSx	SINE/Alu	2	312	(0)	1130083
2290	23.5	1.5	6.8	chr14	21591064	21591114	(85452604)	+	L1MA4	LINE/L1	3168	3209	(4356)	1130078
2246	20.0	10.7	3.1	chr14	22713495	22715747	(84327971)	+	SATR1	Satellite	1	2423	(1)	1131556
15	6.9	2.9	5.7	chr14	22715748	22715781	(84327937)	+	(TTA)n	Simple_repeat	1	35	(0)	1131557
13	15.3	1.9	9.3	chr14	22886399	22886451	(84157267)	+	(CTCCTT)n	Simple_repeat	1	54	(0)	1131898
225	32.7	4.7	3.8	chr14	23563160	23563264	(83480454)	C	MIRc	SINE/MIR	(150)	118	13	1133038
6454	13.7	7.4	2.0	chr14	23622086	23623833	(83419885)	+	MER50-int	LTR/ERV1	8	1850	(5355)	1133129
3838	26.2	15.1	8.4	chr14	23683830	23686381	(83357337)	C	L2a	LINE/L2	(1)	3425	670	1133218
9640	5.6	0.9	12.7	chr14	23897693	23899262	(83144456)	C	SVA_B	Retroposon/SVA	(0)	1383	1	1133500
10117	12.7	2.9	1.8	chr14	23942447	23944072	(83099646)	+	L1PA7	LINE/L1	5	1804	(4351)	1133577
25144	7.3	0.6	0.3	chr14	24450649	24454036	(82589682)	C	L1PA5	LINE/L1	(2759)	3387	5	1134275
24860	7.0	0.9	0.3	chr14	29955379	29961497	(77082221)	C	L1PA5	LINE/L1	(4)	6150	4	1141201
23546	11.4	1.7	3.1	chr14	29972062	29978485	(77065233)	+	L1PA8	LINE/L1	35	6353	(4)	1141224
11027	9.3	1.8	0.1	chr14	30106962	30108473	(76935245)	+	L1P2	LINE/L1	4	1542	(4642)	1141366
27731	2.4	0.2	0.0	chr14	30474045	30480062	(76563656)	+	L1PA3	LINE/L1	129	6154	(1)	1141873
12	18.1	0.0	3.0	chr14	30875362	30875394	(76168324)	+	(CCAGCC)n	Simple_repeat	1	33	(0)	1142477
4610	11.0	1.7	2.3	chr14	31273953	31274278	(75769440)	+	MER4B-int	LTR/ERV1	529	846	(5912)	1143303
1182	12.6	2.2	0.0	chr14	31274325	31274498	(75769220)	C	LTR8	LTR/ERV1	(501)	190	13	1143305
23888	6.5	1.0	0.2	chr14	32517314	32523327	(74520391)	+	L1PA5	LINE/L1	2	6141	(13)	1145255
8368	16.8	1.4	0.8	chr14	32865780	32867174	(74176544)	C	L1PA15	LINE/L1	(5283)	1406	3	1145680
692	30.6	10.3	5.0	chr14	32919842	32920199	(74123519)	+	ERV3-16A3_LTR	LTR/ERVL	1	379	(101)	1145752
15902	15.0	9.1	1.8	chr14	33894972	33896040	(73147678)	+	L1MA9	LINE/L1	6582	7731	(0)	1146869
26	0.0	0.0	0.0	chr14	35046224	35046248	(71997470)	+	(CCCGC)n	Simple_repeat	1	25	(0)	1149235
12	7.2	10.3	0.0	chr14	35046379	35046407	(71997311)	+	(GGCGCG)n	Simple_repeat	1	32	(0)	1149236
335	29.6	3.9	0.0	chr14	35047006	35047130	(71996588)	C	MIRb	SINE/MIR	(21)	247	118	1149237
7136	7.3	3.7	2.9	chr14	35151933	35153416	(71890302)	C	SVA_C	Retroposon/SVA	(1)	1383	16	1149462
22873	10.6	0.8	3.0	chr14	35841595	35844653	(71199065)	C	L1PA7	LINE/L1	(3433)	3028	2	1150717
22745	7.9	0.2	0.1	chr14	37361876	37364273	(69679445)	C	L1PA6	LINE/L1	(3758)	2388	1	1152879
11862	14.3	2.5	0.9	chr14	37364277	37367005	(69676713)	C	L1MA2	LINE/L1	(1052)	5094	2291	1152877
280	17.5	9.3	3.0	chr14	37501521	37501620	(69542098)	C	Charlie18a	DNA/hAT-Charlie	(123)	219	113	1153061
23682	7.6	0.7	0.4	chr14	37501629	37507758	(69535960)	+	L1PA6	LINE/L1	7	6146	(8)	1153062
11583	9.6	0.8	0.2	chr14	38621426	38622996	(68420722)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1154466
1149	16.2	6.7	6.0	chr14	38623007	38623314	(68420404)	+	THE1B	LTR/ERVL-MaLR	16	375	(0)	1154466
5786	9.3	4.0	3.5	chr14	39284751	39286464	(67757254)	C	SVA_C	Retroposon/SVA	(1)	1383	26	1155503
6900	18.1	7.4	3.0	chr14	39440850	39442642	(67601076)	+	LTR2752	LTR/ERV1	1	1343	(412)	1155735
9510	15.1	2.7	5.0	chr14	40475038	40477001	(66566717)	C	HUERS-P3-int	LTR/ERV1	(5505)	1913	3	1156910
463	24.3	1.4	3.4	chr14	43370108	43370256	(63673462)	+	L1MA9	LINE/L1	5675	5820	(471)	1160426
27531	2.3	0.1	0.1	chr14	43370270	43376295	(63667423)	+	L1PA2	LINE/L1	128	6155	(0)	1160427
1069	27.9	8.0	5.6	chr14	45270035	45270500	(61773218)	C	LTR33	LTR/ERVL	(23)	492	15	1162959
375	26.7	2.2	2.2	chr14	45270667	45270800	(61772918)	C	HAL1	LINE/L1	(2141)	366	233	1162960
8411	20.4	2.2	0.7	chr14	45785893	45787573	(61256145)	+	LTR25-int	LTR/ERV1	2	1708	(5480)	1163566
1995	17.9	9.9	1.3	chr14	45818296	45822427	(61221291)	C	SATR1	Satellite	(227)	4487	1	1163597
2139	16.9	8.9	3.4	chr14	45832714	45835618	(61208100)	C	SATR1	Satellite	(0)	3063	1	1163600
12321	11.8	1.6	1.1	chr14	46438183	46441591	(60602127)	+	L1PA7	LINE/L1	1	3412	(3049)	1164284
1615	14.3	0.7	12.2	chr14	47600114	47600441	(59443277)	+	AluSz	SINE/Alu	1	290	(22)	1165786
3902	11.8	1.5	1.8	chr14	48566310	48566920	(58476798)	C	MER51-int	LTR/ERV1	(7207)	609	1	1166881
953	12.3	8.5	0.0	chr14	48566925	48567086	(58476632)	C	MER51B	LTR/ERV1	(4)	373	197	1166881
5009	5.0	0.2	1.1	chr14	48598598	48599225	(58444493)	+	SVA_B	Retroposon/SVA	762	1383	(0)	1166917
13	7.9	3.6	0.0	chr14	49683108	49683119	(57360599)	+	(TAAAA)n	Simple_repeat	1	13	(0)	1168405
2072	13.9	0.3	0.3	chr14	49683120	49683436	(57360282)	+	AluSx	SINE/Alu	1	312	(0)	1168406
32	31.1	0.0	3.7	chr14	49767978	49768120	(57275598)	+	(GGC)n	Simple_repeat	1	137	(0)	1168592
24	26.0	0.0	5.5	chr14	50532503	50532593	(56511125)	+	(GCC)n	Simple_repeat	1	91	(0)	1170125
4565	21.8	10.8	4.3	chr14	51432915	51435293	(55608425)	+	L1MC4a	LINE/L1	5335	7877	(5)	1171460
403	29.9	4.6	5.3	chr14	51744347	51744650	(55299068)	C	SATR2	Satellite	(48)	301	1	1171922
1638	22.3	10.0	5.7	chr14	51744651	51745386	(55298332)	+	SATR1	Satellite	1807	2678	(4)	1171921
2326	11.1	0.0	0.0	chr14	52567650	52567956	(54475762)	C	AluSg	SINE/Alu	(2)	308	2	1173132
22723	10.1	1.9	3.1	chr14	52567992	52571432	(54472286)	+	L1PA7	LINE/L1	1	3398	(3063)	1173133
11907	14.1	2.9	6.4	chr14	53113447	53117168	(53926550)	+	L1PA10	LINE/L1	3	3582	(2749)	1174070
25009	6.4	0.7	0.3	chr14	54027691	54033829	(53009889)	C	L1PA5	LINE/L1	(5)	6149	4	1175360
513	26.9	11.2	0.6	chr14	54867291	54867305	(52176413)	+	MIRc	SINE/MIR	46	60	(208)	1176573
2467	11.0	0.0	0.7	chr14	54867306	54867614	(52176104)	+	AluSx	SINE/Alu	1	307	(5)	1176574
15	13.4	2.9	2.8	chr14	55051679	55051713	(51992005)	+	(GCT)n	Simple_repeat	1	36	(0)	1176946
953	30.8	6.4	5.0	chr14	55484388	55484785	(51558933)	+	LTR78	LTR/ERV1	525	927	(377)	1177778
725	26.3	4.5	0.5	chr14	55484801	55485014	(51558704)	+	LTR78	LTR/ERV1	1068	1290	(14)	1177778
628	25.8	14.4	8.3	chr14	55881508	55882134	(51161584)	C	LTR81C	LTR/Gypsy	(0)	1393	729	1178457
1822	21.2	5.5	2.4	chr14	55882293	55882832	(51160886)	C	Charlie2b	DNA/hAT-Charlie	(0)	2782	2225	1178458
1610	23.6	9.3	1.7	chr14	55928695	55929219	(51114499)	C	L1ME3E	LINE/L1	(11)	6231	5663	1178538
650	23.5	9.2	1.0	chr14	55929220	55929434	(51114284)	C	MLT1J	LTR/ERVL-MaLR	(236)	276	1	1178539
590	27.3	2.1	3.7	chr14	56416805	56416909	(50626809)	+	HERV16-int	LTR/ERVL	3627	3730	(1496)	1179182
251	25.8	3.1	0.0	chr14	56416935	56416996	(50626722)	+	HERV16-int	LTR/ERVL	4582	4645	(1022)	1179182
798	24.3	5.1	0.0	chr14	56416997	56417202	(50626516)	+	LTR16A	LTR/ERVL	193	409	(42)	1179185
23	31.6	0.0	0.0	chr14	56817108	56817113	(50226605)	+	(GCGTGT)n	Simple_repeat	1	14	(65)	1179772
21	26.4	0.0	0.0	chr14	56817114	56817164	(50226554)	+	(GT)n	Simple_repeat	1	51	(0)	1179773
23	31.6	0.0	0.0	chr14	56817165	56817186	(50226532)	+	(GCGTGT)n	Simple_repeat	15	79	(0)	1179772
1742	17.1	6.5	0.7	chr14	56824365	56824656	(50219062)	C	7SLRNA	srpRNA	(10)	310	1	1179781
687	17.8	0.0	0.0	chr14	56824986	56825092	(50218626)	+	U6	snRNA	1	107	(0)	1179782
180	20.5	0.0	4.3	chr14	57360618	57360663	(49683055)	+	MamRTE1	LINE/RTE-BovB	1470	1513	(2299)	1180634
21784	12.5	2.7	3.5	chr14	57542405	57545527	(49498191)	C	L1PA6	LINE/L1	(3306)	3155	4	1180905
20733	6.6	0.6	0.3	chr14	59400838	59405729	(47637989)	C	L1P2	LINE/L1	(1102)	5359	465	1183668
359	8.7	0.0	0.0	chr14	59405735	59405780	(47637938)	C	L1P3	LINE/L1	(5856)	605	560	1183669
18	12.1	6.6	6.2	chr14	60249684	60249744	(46793974)	+	(GCG)n	Simple_repeat	1	65	(0)	1184790
17	25.0	3.2	1.5	chr14	60249844	60249934	(46793784)	+	(GGCGGT)n	Simple_repeat	1	92	(0)	1184791
22967	7.3	0.9	0.4	chr14	60443053	60449196	(46594522)	+	L1PA6	LINE/L1	5	6153	(1)	1185032
24326	7.9	0.6	0.6	chr14	60523260	60529424	(46514294)	C	L1PA6	LINE/L1	(7)	6147	5	1185131
19	15.3	0.0	0.0	chr14	60723160	60723197	(46320521)	+	G-rich	Low_complexity	1	38	(0)	1185456
25712	6.4	0.7	0.1	chr14	61092272	61098394	(45945324)	C	L1PA5	LINE/L1	(2)	6152	4	1185985
6256	16.2	0.7	0.0	chr14	61114842	61115794	(45927924)	C	HERVIP10FH-int	LTR/ERV1	(0)	7847	6888	1186008
12	19.3	0.0	10.3	chr14	61695436	61695493	(45348225)	+	(CCCTCC)n	Simple_repeat	1	58	(0)	1186912
13	21.9	2.3	2.2	chr14	61695857	61695900	(45347818)	+	(GCCC)n	Simple_repeat	1	45	(0)	1186913
673	23.3	3.5	3.5	chr14	63046606	63046774	(43996944)	+	MER5A	DNA/hAT-Charlie	1	169	(20)	1188631
54	16.5	4.3	0.0	chr14	63047117	63047162	(43996556)	+	(TC)n	Simple_repeat	1	47	(0)	1188632
39	2.2	0.0	4.0	chr14	63047163	63047212	(43996506)	+	(CCTCC)n	Simple_repeat	1	50	(0)	1188633
54	16.5	4.3	0.0	chr14	63047213	63047282	(43996436)	+	(TC)n	Simple_repeat	2	75	(0)	1188634
13	9.1	0.0	3.9	chr14	63543158	63543183	(43500535)	+	(GGGA)n	Simple_repeat	1	26	(0)	1189433
2063	10.8	1.0	1.4	chr14	63609507	63609792	(43433926)	+	AluSx	SINE/Alu	1	288	(24)	1189610
31	3.0	0.0	0.0	chr14	63609793	63609826	(43433892)	+	(AAAAT)n	Simple_repeat	1	34	(0)	1189611
12	16.3	5.7	0.0	chr14	65053369	65053403	(41990315)	+	GA-rich	Low_complexity	1	37	(0)	1192350
2750	18.2	4.7	2.4	chr14	66195286	66196136	(40847582)	C	LTR27B	LTR/ERV1	(0)	974	1	1194268
16	0.0	0.0	0.0	chr14	66196156	66196172	(40847546)	+	(T)n	Simple_repeat	1	17	(0)	1194269
1582	17.1	5.5	8.2	chr14	66521450	66521825	(40521893)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1194731
442	30.4	6.1	4.0	chr14	66521826	66521904	(40521814)	C	MLT1K	LTR/ERVL-MaLR	(497)	98	16	1194729
22714	9.5	1.6	0.5	chr14	66872985	66879366	(40164352)	+	L1PA7	LINE/L1	8	6469	(0)	1195154
486	32.9	6.1	7.5	chr14	67031938	67032501	(40011217)	+	L1MB2	LINE/L1	699	1191	(5374)	1195361
2904	24.5	4.2	4.7	chr14	67032726	67033281	(40010437)	+	L1MB2	LINE/L1	1062	1896	(4679)	1195361
23864	7.6	0.4	0.4	chr14	67062674	67068092	(39975626)	C	L1P2	LINE/L1	(748)	5571	174	1195394
298	31.4	4.7	1.0	chr14	67068098	67068200	(39975518)	C	MIRc	SINE/MIR	(160)	108	2	1195395
1328	17.4	3.2	3.2	chr14	67493237	67493596	(39550122)	+	LTR10G	LTR/ERV1	188	547	(0)	1196162
536	28.5	7.5	6.4	chr14	67493603	67493838	(39549880)	+	MLT1K	LTR/ERVL-MaLR	105	343	(252)	1196163
255	27.6	6.1	4.7	chr14	68120358	68120486	(38923232)	C	L1MEd	LINE/L1	(6522)	564	434	1197241
204	25.0	1.8	0.0	chr14	68120487	68120542	(38923176)	+	L2a	LINE/L2	3370	3426	(0)	1197246
341	31.4	7.7	10.5	chr14	68120631	68120954	(38922764)	C	L1MEd	LINE/L1	(6694)	392	79	1197241
16	16.6	7.6	4.2	chr14	69611438	69611503	(37432215)	+	(CGG)n	Simple_repeat	1	71	(0)	1199890
20	20.9	6.1	0.0	chr14	69611512	69611581	(37432137)	+	(GCCCCT)n	Simple_repeat	1	74	(0)	1199891
12	15.3	3.5	0.0	chr14	69611654	69611682	(37432036)	+	(CCTC)n	Simple_repeat	1	30	(0)	1199892
25960	6.2	0.7	0.2	chr14	70936131	70942258	(36101460)	C	L1PA5	LINE/L1	(0)	6154	4	1202014
780	14.4	8.7	8.2	chr14	70942416	70942597	(36101121)	C	MER21B	LTR/ERVL	(2)	866	684	1202015
1080	16.7	9.6	0.0	chr14	70942602	70942799	(36100919)	C	MER21B	LTR/ERVL	(399)	469	251	1202015
16	24.8	0.0	3.6	chr14	71321008	71321016	(35722702)	+	(GCCGCTC)n	Simple_repeat	1	51	(0)	1202621
16	7.6	11.9	0.0	chr14	71321017	71321058	(35722660)	+	(CGCTCGG)n	Simple_repeat	1	47	(0)	1202622
1597	20.3	9.5	3.7	chr14	72150018	72150451	(34893267)	+	MLT1C	LTR/ERVL-MaLR	6	467	(0)	1203864
1797	17.4	10.0	4.7	chr14	72150473	72150876	(34892842)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1203865
23	24.7	0.0	6.5	chr14	73458333	73458424	(33585294)	+	(CGCCCC)n	Simple_repeat	1	92	(0)	1206318
471	30.0	5.0	0.9	chr14	73574565	73574776	(33468942)	C	L2	LINE/L2	(2476)	943	723	1206593
238	34.0	2.9	2.0	chr14	73574731	73574832	(33468886)	C	MIRb	SINE/MIR	(125)	143	41	1206594
1958	16.7	0.0	0.6	chr14	73737343	73737653	(33306065)	+	AluJb	SINE/Alu	2	310	(2)	1206974
1085	15.4	4.0	0.0	chr14	73834629	73834797	(33208921)	C	AluJb	SINE/Alu	(12)	300	125	1207178
23	16.3	0.0	2.0	chr14	74493501	74493550	(32550168)	+	(CCCGC)n	Simple_repeat	1	50	(0)	1208642
19	20.1	1.9	1.9	chr14	74612690	74612747	(32430971)	+	G-rich	Low_complexity	1	58	(0)	1208836
427	23.9	18.4	0.0	chr14	74913861	74914015	(32129703)	C	MIRb	SINE/MIR	(45)	223	34	1209383
225	20.8	6.5	4.0	chr14	74914049	74914123	(32129595)	+	MIR3	SINE/MIR	86	162	(46)	1209384
22	22.3	3.9	5.6	chr14	76947454	76947571	(30096147)	+	(TGCCCC)n	Simple_repeat	1	115	(0)	1213267
16	24.0	0.0	5.1	chr14	77616376	77616434	(29427284)	+	(CCCCG)n	Simple_repeat	1	59	(0)	1214574
18	9.4	2.9	0.0	chr14	77616453	77616486	(29427232)	+	(CGGCTG)n	Simple_repeat	1	35	(0)	1214575
12	13.9	0.0	0.0	chr14	77616616	77616639	(29427079)	+	(GGC)n	Simple_repeat	1	24	(0)	1214576
13	18.9	4.3	4.1	chr14	79279550	79279596	(27764122)	+	(TCC)n	Simple_repeat	1	49	(0)	1217535
13	13.1	0.0	0.0	chr14	79279599	79279623	(27764095)	+	(GCT)n	Simple_repeat	1	25	(0)	1217536
19	21.1	0.0	0.0	chr14	81220554	81220591	(25823127)	+	A-rich	Low_complexity	1	38	(0)	1220298
16	19.1	0.0	4.3	chr14	81220592	81220599	(25823119)	+	(AACAA)n	Simple_repeat	1	46	(0)	1220299
16	9.6	2.7	5.3	chr14	81220663	81220699	(25823019)	+	GA-rich	Low_complexity	1	38	(0)	1220300
14	17.1	7.1	3.3	chr14	81220829	81220884	(25822834)	+	(CCGCTG)n	Simple_repeat	1	60	(0)	1220301
2048	13.0	11.9	1.1	chr14	85035914	85036294	(22007424)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1225642
414	29.9	4.5	0.0	chr14	88246771	88246897	(18796821)	+	MIRb	SINE/MIR	96	228	(40)	1230131
14	14.6	5.0	2.4	chr14	88554542	88554581	(18489137)	+	G-rich	Low_complexity	1	42	(0)	1230606
20	16.6	5.3	5.1	chr14	88554639	88554713	(18489005)	+	(CCGCTC)n	Simple_repeat	1	79	(0)	1230607
15	34.0	1.1	3.2	chr14	88562934	88563026	(18480692)	+	G-rich	Low_complexity	1	94	(0)	1230629
17	8.6	5.1	2.4	chr14	88563467	88563505	(18480213)	+	G-rich	Low_complexity	1	41	(0)	1230630
464	25.9	8.0	5.1	chr14	90428744	90428938	(16614780)	+	MLT1H	LTR/ERVL-MaLR	23	223	(326)	1233890
2290	12.8	0.0	0.0	chr14	90428939	90429250	(16614468)	C	AluSx	SINE/Alu	(0)	312	1	1233891
247	36.2	8.4	5.6	chr14	90596544	90596830	(16446888)	+	L2c	LINE/L2	3089	3384	(3)	1234190
229	40.2	3.2	0.0	chr14	92340189	92340310	(14703408)	C	L2c	LINE/L2	(4)	3383	3258	1237376
343	32.5	14.8	2.7	chr14	94522850	94523146	(12520572)	C	L2a	LINE/L2	(0)	3426	3088	1241275
266	27.4	2.7	0.0	chr14	94812097	94812169	(12231549)	+	L2c	LINE/L2	3295	3369	(18)	1241870
58	17.0	3.7	5.7	chr14	94997715	94997745	(12045973)	+	A-rich	Low_complexity	1	34	(0)	1242273
1864	9.8	2.7	0.8	chr14	94997746	94998000	(12045718)	+	AluSx1	SINE/Alu	39	298	(14)	1242274
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
1658	21.9	2.9	1.5	chr14	99519556	99519967	(7523751)	+	L1MB5	LINE/L1	5642	6059	(115)	1250145
397	23.0	15.4	8.3	chr14	100375757	100375984	(6667734)	+	MIR	SINE/MIR	2	248	(14)	1251756
15	30.4	0.0	0.0	chr14	100376199	100376250	(6667468)	+	(TCCC)n	Simple_repeat	1	52	(0)	1251757
299	25.9	12.2	5.3	chr14	100860812	100861006	(6182712)	+	MIRb	SINE/MIR	33	254	(14)	1252503
111	22.3	2.6	2.6	chr14	101399783	101400086	(5643632)	+	GA-rich	Low_complexity	1	312	(0)	1253101
495	24.4	6.7	6.7	chr14	101535322	101535501	(5508217)	+	MER121	DNA/hAT?	156	335	(66)	1253272
2730	14.1	1.6	0.5	chr14	101544650	101545070	(5498648)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1253289
212	34.3	10.7	2.2	chr14	101601398	101601534	(5442184)	C	MIRb	SINE/MIR	(76)	192	39	1253382
236	27.1	11.2	0.6	chr14	101601612	101601732	(5441986)	+	MIRc	SINE/MIR	38	169	(99)	1253383
226	29.2	5.3	0.0	chr14	101601788	101601859	(5441859)	+	MIR	SINE/MIR	6	81	(181)	1253384
251	34.2	1.3	0.0	chr14	101731936	101732011	(5311707)	+	MIRb	SINE/MIR	13	89	(179)	1253569
830	21.2	1.7	0.0	chr14	101732012	101732181	(5311537)	+	Arthur1A	DNA/hAT-Tip100	1	173	(4)	1253570
44	0.0	0.0	0.0	chr14	101825212	101825249	(5218469)	+	(GT)n	Simple_repeat	1	38	(0)	1253709
1258	15.7	0.9	0.5	chr14	102065339	102065548	(4978170)	C	AluJo	SINE/Alu	(92)	220	10	1254145
103	19.0	1.8	0.9	chr14	102498843	102499067	(4544651)	+	(ACCAC)n	Simple_repeat	1	229	(0)	1255041
2017	29.7	12.7	4.7	chr14	102577355	102577624	(4466094)	+	MSTD-int	LTR/ERVL-MaLR	664	1016	(355)	1255223
1885	16.1	0.0	1.9	chr14	102577625	102577935	(4465783)	+	AluJb	SINE/Alu	1	305	(7)	1255228
191	31.9	1.4	1.4	chr14	102925712	102925781	(4117937)	C	L2b	LINE/L2	(0)	3375	3306	1255909
2350	8.3	3.2	0.0	chr14	103103083	103103383	(3940335)	+	AluSx	SINE/Alu	1	311	(1)	1256202
318	28.6	16.4	1.8	chr14	103879552	103879722	(3163996)	C	MIR	SINE/MIR	(16)	246	46	1257715
376	31.4	5.3	3.7	chr14	104228022	104228271	(2815447)	C	L2b	LINE/L2	(179)	3208	2937	1258203
236	23.0	5.1	1.3	chr14	104228286	104228360	(2815358)	C	L2b	LINE/L2	(525)	2894	2817	1258203
536	23.9	6.2	1.0	chr14	104228613	104228791	(2814927)	C	MIRb	SINE/MIR	(65)	203	15	1258204
23	19.6	2.7	3.9	chr14	104604465	104604543	(2439175)	+	(GCGGCAG)n	Simple_repeat	1	78	(0)	1258579
13	19.9	4.9	0.0	chr14	104650405	104650445	(2393273)	+	(CCACTCC)n	Simple_repeat	1	43	(0)	1258648
19	15.6	4.8	4.5	chr14	104650446	104650463	(2393255)	+	(CCCTCC)n	Simple_repeat	5	66	(0)	1258649
2437	8.2	0.0	0.0	chr14	105002976	105003278	(2040440)	C	AluSg7	SINE/Alu	(2)	307	5	1259081
2437	7.0	0.7	0.0	chr14	105003558	105003859	(2039859)	+	AluY	SINE/Alu	1	304	(7)	1259082
855	8.8	0.0	0.0	chr14	105370747	105370859	(1672859)	C	AluSx	SINE/Alu	(199)	113	1	1259597
1829	23.7	5.4	1.1	chr14	105433012	105433573	(1610145)	C	MER77	LTR/ERVL	(8)	596	9	1259692
21	12.5	5.4	3.4	chr14	105478874	105478929	(1564789)	+	G-rich	Low_complexity	1	59	(0)	1259734
20	9.2	0.0	2.7	chr14	105479057	105479104	(1564614)	+	(CGCCCC)n	Simple_repeat	1	46	(0)	1259735
1262	16.9	10.4	7.4	chr14	106882797	106883160	(160558)	C	L1MC3	LINE/L1	(1)	7784	7409	1261163
3396	10.1	0.2	0.9	chr14	106883179	106883718	(160000)	+	TAR1	Satellite/telo	484	1019	(1092)	1261164
1659	14.5	0.3	2.0	chr15	20282672	20282966	(81708223)	+	TAR1	Satellite/telo	1525	1814	(297)	1263103
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
25685	5.7	0.7	0.0	chr15	28154772	28160881	(73830308)	C	L1PA5	LINE/L1	(6)	6148	1	1273455
330	31.0	2.1	2.1	chr15	31137847	31137991	(70853198)	+	MER57A-int	LTR/ERV1	1431	1575	(6038)	1278153
341	26.9	2.5	2.5	chr15	31138471	31138575	(70852614)	+	MER57A-int	LTR/ERV1	947	1050	(5137)	1278154
311	31.1	7.1	2.2	chr15	31815380	31815570	(70175619)	C	MIRc	SINE/MIR	(52)	216	17	1279068
645	26.1	8.5	12.9	chr15	34165801	34165953	(67825236)	+	L1M6	LINE/L1	430	572	(2189)	1282386
24674	7.6	0.7	0.1	chr15	34165959	34172091	(67819098)	+	L1PA6	LINE/L1	174	6327	(0)	1282388
12547	12.4	2.6	3.7	chr15	37317086	37319956	(64671233)	+	L1P2	LINE/L1	8	2829	(3317)	1286792
22821	9.5	1.5	0.8	chr15	38119421	38125490	(63865699)	+	L1PA7	LINE/L1	1	6095	(374)	1287785
245	18.2	1.8	0.0	chr15	38901297	38901351	(63089838)	C	L1MA9	LINE/L1	(213)	6099	6044	1288991
1176	16.9	9.1	7.2	chr15	38901377	38901655	(63089534)	C	AluJr	SINE/Alu	(19)	293	9	1288993
1763	14.9	2.8	1.0	chr15	38901662	38901973	(63089216)	C	L1MA9	LINE/L1	(352)	5960	5643	1288991
17	31.3	2.7	0.0	chr15	40470879	40470953	(61520236)	+	(GCCCCC)n	Simple_repeat	1	77	(0)	1291233
17	11.8	1.8	8.9	chr15	40471014	40471070	(61520119)	+	(CCGCCGC)n	Simple_repeat	1	52	(0)	1291234
11	24.6	0.0	2.5	chr15	40471115	40471154	(61520035)	+	(CCCCAG)n	Simple_repeat	1	40	(0)	1291235
15	22.0	1.7	5.1	chr15	40471267	40471324	(61519865)	+	G-rich	Low_complexity	1	59	(0)	1291236
31	0.0	0.0	0.0	chr15	40973211	40973237	(61017952)	+	(CA)n	Simple_repeat	1	27	(0)	1292281
16701	8.8	1.0	2.3	chr15	44865788	44867850	(57123339)	+	L1PA6	LINE/L1	1	2055	(4129)	1299690
10677	8.1	1.3	0.2	chr15	49591888	49593319	(52397870)	C	L1P2	LINE/L1	(4789)	1395	4	1306439
255	19.8	0.0	4.8	chr15	49593311	49593398	(52397791)	C	L1M3e	LINE/L1	(1645)	5920	5838	1306440
23744	8.6	0.8	0.4	chr15	49965827	49972283	(52018906)	+	L1PA7	LINE/L1	8	6468	(1)	1306900
24	12.1	2.2	0.0	chr15	50145665	50145709	(51845480)	+	(TCTT)n	Simple_repeat	1	46	(0)	1307181
10175	4.3	0.7	1.4	chr15	50157728	50159111	(51832078)	+	SVA_D	Retroposon/SVA	2	1376	(10)	1307200
16	15.5	2.8	0.0	chr15	50765403	50765438	(51225751)	+	(GCCCCG)n	Simple_repeat	1	37	(0)	1308471
13	20.2	4.3	2.0	chr15	50765626	50765672	(51225517)	+	(CCGGA)n	Simple_repeat	1	49	(0)	1308472
15714	9.4	2.2	1.6	chr15	51568815	51573077	(50418112)	+	L1PA7	LINE/L1	7	4281	(1865)	1309709
26099	4.7	0.4	0.2	chr15	51590947	51597084	(50394105)	+	L1PA4	LINE/L1	1	6155	(0)	1309732
20	23.2	0.0	7.4	chr15	52790363	52790443	(49200746)	+	(GCC)n	Simple_repeat	1	81	(0)	1311891
26509	2.8	0.0	0.0	chr15	53135443	53141475	(48849714)	C	L1PA2	LINE/L1	(0)	6155	124	1312346
325	33.3	2.1	5.5	chr15	55779403	55779548	(46211641)	C	MLT1O	LTR/ERVL-MaLR	(397)	145	5	1316177
8679	18.3	9.8	2.0	chr15	56127846	56129063	(45862126)	+	L1M4	LINE/L1	3716	5034	(1610)	1316742
27522	2.8	0.3	0.0	chr15	56134619	56140628	(45850561)	C	L1PA2	LINE/L1	(0)	6155	124	1316753
322	30.6	7.8	9.2	chr15	56149103	56149342	(45841847)	+	MLT1I	LTR/ERVL-MaLR	184	411	(0)	1316767
16512	14.1	3.6	3.5	chr15	56149423	56155773	(45835416)	+	L1PA7	LINE/L1	22	6466	(3)	1316769
1399	16.7	1.9	0.0	chr15	58761096	58761305	(43229884)	+	AluJr	SINE/Alu	85	298	(14)	1320746
292	35.0	3.2	0.8	chr15	58761308	58761428	(43229761)	+	MER5A	DNA/hAT-Charlie	66	189	(0)	1320747
20	19.2	0.0	2.0	chr15	60398048	60398096	(41593093)	+	(CCCGC)n	Simple_repeat	1	49	(0)	1323705
451	20.2	0.0	1.1	chr15	60698249	60698338	(41292851)	+	Zaphod3	DNA/hAT-Tip100	83	171	(2452)	1324193
604	19.5	4.8	4.8	chr15	61483529	61483695	(40507494)	+	MLT1D	LTR/ERVL-MaLR	18	184	(321)	1325394
448	25.8	13.2	2.0	chr15	61483722	61483923	(40507266)	+	MLT1D	LTR/ERVL-MaLR	270	497	(8)	1325394
2949	1.3	0.0	0.0	chr15	61483966	61484277	(40506912)	C	AluYb8	SINE/Alu	(6)	312	1	1325395
1846	18.9	5.7	6.3	chr15	62103172	62103549	(39887640)	+	Arthur1	DNA/hAT-Tip100	3570	3947	(0)	1326351
2829	12.5	3.6	1.5	chr15	62218506	62218961	(39772228)	+	MER50	LTR/ERV1	1	466	(268)	1326538
5353	4.5	0.8	0.1	chr15	62218972	62219621	(39771568)	+	SVA_C	Retroposon/SVA	730	1383	(1)	1326539
376	28.2	5.6	1.7	chr15	62251344	62251462	(39739727)	C	L2a	LINE/L2	(3)	3423	3300	1326577
180	24.6	9.5	1.7	chr15	62256590	62256647	(39734542)	C	L3	LINE/CR1	(778)	3321	3259	1326582
495	16.1	0.0	0.0	chr15	62256672	62256752	(39734437)	+	MER51A	LTR/ERV1	1	81	(553)	1326583
180	22.2	10.0	1.8	chr15	62260819	62260873	(39730316)	C	L3	LINE/CR1	(781)	3318	3259	1326593
3305	14.7	5.3	1.7	chr15	62260898	62261492	(39729697)	+	MER51A	LTR/ERV1	1	618	(16)	1326594
1122	14.2	6.4	3.7	chr15	62923758	62923925	(39067264)	+	L1MA5	LINE/L1	6112	6295	(5)	1327631
61	24.9	5.3	2.5	chr15	63277309	63277571	(38713618)	+	(CCGCGCC)n	Simple_repeat	1	277	(0)	1328275
662	35.5	9.5	1.8	chr15	65056683	65057126	(36934063)	C	L3	LINE/CR1	(1068)	3031	2550	1331799
397	26.2	3.1	0.0	chr15	65057381	65057506	(36933683)	C	MER102c	DNA/hAT-Charlie	(0)	331	202	1331800
372	12.9	12.3	1.1	chr15	65057696	65057789	(36933400)	+	MLT1O	LTR/ERVL-MaLR	122	227	(315)	1331801
2190	6.3	0.7	2.0	chr15	65297343	65297642	(36693547)	C	AluSz	SINE/Alu	(16)	296	1	1332328
352	25.3	6.1	7.1	chr15	65297652	65297834	(36693355)	+	Charlie2b	DNA/hAT-Charlie	2600	2780	(2)	1332329
12	17.0	8.3	1.9	chr15	65423107	65423154	(36568035)	+	(CCCTGCG)n	Simple_repeat	1	52	(0)	1332587
276	26.7	13.0	7.4	chr15	65530012	65530187	(36461002)	+	L2b	LINE/L2	3183	3408	(18)	1332845
15	19.9	0.0	0.0	chr15	65531202	65531230	(36459959)	+	G-rich	Low_complexity	1	29	(0)	1332846
15	12.7	0.0	5.3	chr15	66293695	66293732	(35697457)	+	(CCGCAGC)n	Simple_repeat	1	38	(0)	1334370
23	23.0	3.2	4.2	chr15	66293740	66293832	(35697357)	+	G-rich	Low_complexity	1	96	(0)	1334371
13	18.3	2.6	2.5	chr15	66386883	66386921	(35604268)	+	(TCCCC)n	Simple_repeat	1	40	(0)	1334597
12	12.2	3.7	0.0	chr15	66387261	66387287	(35603902)	+	(GCGCA)n	Simple_repeat	1	28	(0)	1334598
17372	6.2	0.8	0.1	chr15	66811398	66814133	(35177056)	C	L1PA6	LINE/L1	(3403)	2743	5	1335498
295	34.6	1.0	0.0	chr15	66898842	66898942	(35092247)	C	MIR3	SINE/MIR	(88)	120	19	1335668
238	28.2	2.5	0.0	chr15	66899084	66899161	(35092028)	+	MLT1L	LTR/ERVL-MaLR	174	253	(357)	1335669
964	24.5	6.1	4.6	chr15	66899207	66899322	(35091867)	+	L2a	LINE/L2	3096	3203	(223)	1335670
11	20.6	5.1	0.0	chr15	67521309	67521347	(34469842)	+	(GCCCCGC)n	Simple_repeat	1	41	(0)	1336753
399	32.8	14.2	4.5	chr15	67754427	67754760	(34236429)	C	L2c	LINE/L2	(1)	3386	3016	1337101
579	31.8	9.2	10.3	chr15	67813271	67813708	(34177481)	+	L2c	LINE/L2	2942	3386	(1)	1337167
3983	28.4	9.8	7.7	chr15	67935216	67936765	(34054424)	+	ERV3-16A3_I-int	LTR/ERVL	1130	2712	(2514)	1337413
14	25.1	2.1	0.0	chr15	68229352	68229398	(33761791)	+	(CGCCC)n	Simple_repeat	1	48	(0)	1337960
39	30.9	2.7	2.1	chr15	68229676	68229860	(33761329)	+	G-rich	Low_complexity	1	190	(0)	1337961
401	23.2	3.0	5.0	chr15	68331219	68331366	(33659823)	+	MamTip2	DNA/hAT-Tip100	1	199	(106)	1338152
307	15.5	24.5	0.0	chr15	68888025	68888095	(33103094)	+	Charlie10	DNA/hAT-Charlie	2	95	(2727)	1339248
1284	25.4	16.6	6.2	chr15	68888102	68888904	(33102285)	C	L1MCc	LINE/L1	(5502)	921	19	1339249
1226	24.1	2.6	2.9	chr15	68888913	68889296	(33101893)	+	Charlie10	DNA/hAT-Charlie	2158	2540	(282)	1339250
341	30.2	1.4	8.6	chr15	69479100	69479251	(32511938)	+	MIR3	SINE/MIR	57	197	(11)	1340305
196	23.4	4.1	0.0	chr15	69479251	69479297	(32511892)	C	UCON132b	DNA/hAT-Tip100	(47)	101	53	1340306
1069	30.4	10.3	3.3	chr15	69756590	69757129	(32234060)	+	Tigger13a	DNA/TcMar-Tigger	1	582	(189)	1340856
436	32.4	10.0	1.8	chr15	70451872	70452091	(31539098)	+	MIRb	SINE/MIR	29	268	(0)	1342163
1243	26.6	12.3	4.7	chr15	70615495	70616191	(31374998)	C	LTR50	LTR/ERVL	(31)	764	8	1342479
2128	13.7	6.0	0.3	chr15	71068306	71068664	(30922525)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1343159
26267	5.6	0.4	0.1	chr15	71367293	71372997	(30618192)	C	L1PA5	LINE/L1	(0)	6154	429	1343629
384	31.1	5.3	3.6	chr15	71373120	71373399	(30617790)	C	L1M5	LINE/L1	(3209)	2937	2653	1343630
408	27.0	6.1	7.0	chr15	71546807	71547005	(30444184)	C	MIR3	SINE/MIR	(9)	199	3	1343917
222	32.4	8.0	4.8	chr15	71811099	71811328	(30179861)	C	L2	LINE/L2	(1366)	2053	1816	1344405
21	8.6	0.0	4.9	chr15	71811430	71811470	(30179719)	+	(GCCCT)n	Simple_repeat	1	41	(0)	1344406
12	17.0	2.2	6.5	chr15	72230804	72230848	(29760341)	+	(GAGGATG)n	Simple_repeat	1	46	(0)	1345108
13	21.7	0.0	7.3	chr15	72272560	72272614	(29718575)	+	G-rich	Low_complexity	1	55	(0)	1345170
629	32.2	5.5	2.4	chr15	72273122	72273306	(29717883)	+	MIRb	SINE/MIR	8	202	(66)	1345171
19	6.3	2.9	2.8	chr15	72474428	72474462	(29516727)	+	(CCCT)n	Simple_repeat	1	36	(0)	1345546
21	19.5	3.3	1.6	chr15	72474519	72474578	(29516611)	+	(CGGAGC)n	Simple_repeat	1	62	(0)	1345547
25	27.0	1.0	4.0	chr15	72474642	72474752	(29516437)	+	(GGACGA)n	Simple_repeat	1	107	(0)	1345548
13	17.3	3.3	7.9	chr15	72474796	72474856	(29516333)	+	(GGCGGC)n	Simple_repeat	1	63	(0)	1345549
27	3.5	0.0	0.0	chr15	72474867	72474896	(29516293)	+	(CGG)n	Simple_repeat	1	30	(0)	1345550
2256	8.9	0.3	0.0	chr15	72851917	72852198	(29138991)	+	AluSz6	SINE/Alu	1	283	(29)	1346207
12	13.3	2.7	5.3	chr15	73702725	73702761	(28288428)	+	(CCCCTG)n	Simple_repeat	1	38	(0)	1347575
1952	9.7	0.0	13.2	chr15	74822041	74822381	(27168808)	+	AluSc	SINE/Alu	1	296	(13)	1349588
2019	13.8	0.7	0.3	chr15	75113856	75114153	(26877036)	C	AluJb	SINE/Alu	(13)	299	1	1350208
23233	9.8	1.9	1.7	chr15	75971803	75977771	(26013418)	C	L1P3	LINE/L1	(434)	6035	7	1351815
437	28.3	9.2	0.0	chr15	77532434	77532597	(24458592)	C	MIRb	SINE/MIR	(70)	198	20	1354217
240	34.2	10.1	1.9	chr15	77616743	77616897	(24374292)	+	L2c	LINE/L2	3020	3188	(199)	1354355
513	28.8	13.2	0.0	chr15	77742369	77742559	(24248630)	C	MIRb	SINE/MIR	(13)	255	36	1354573
209	26.3	1.7	1.7	chr15	77773173	77773230	(24217959)	+	MIR3	SINE/MIR	117	174	(34)	1354636
24581	6.0	0.9	0.6	chr15	78375964	78382101	(23609088)	C	L1PA6	LINE/L1	(0)	6154	9	1355759
190	30.5	4.7	1.2	chr15	79223383	79223465	(22767724)	C	L2a	LINE/L2	(30)	3396	3311	1357484
6097	18.0	4.7	3.4	chr15	79688530	79690078	(22301111)	+	L1M4	LINE/L1	3354	4922	(1722)	1358224
3483	18.8	6.2	3.6	chr15	79690074	79690956	(22300233)	+	L1M4	LINE/L1	3997	4903	(1243)	1358225
13	15.8	0.0	7.3	chr15	79923094	79923134	(22068055)	+	(CCGCC)n	Simple_repeat	1	41	(0)	1358601
367	31.7	11.4	4.6	chr15	80059764	80059958	(21931231)	+	L1MDb	LINE/L1	552	761	(5648)	1358904
11558	13.5	1.9	1.1	chr15	80307291	80309078	(21682111)	C	L1PA10	LINE/L1	(4544)	1809	8	1359328
17062	14.8	13.9	13.0	chr15	80366623	80369179	(21622010)	+	HUERS-P3b-int	LTR/ERV1	17	3012	(4406)	1359425
15	12.7	6.4	4.0	chr15	81000953	81000999	(20990190)	+	(CGGCGG)n	Simple_repeat	1	50	(0)	1360519
1394	22.0	8.7	3.9	chr15	81118757	81119429	(20871760)	C	MER101-int	LTR/ERV1	(1299)	5032	3925	1360747
22	17.7	1.9	1.9	chr15	82046055	82046107	(19945082)	+	(CCCT)n	Simple_repeat	1	54	(0)	1362235
19	23.5	1.4	4.2	chr15	82046309	82046378	(19944811)	+	(CCGCCCC)n	Simple_repeat	1	71	(0)	1362236
17	4.9	0.0	0.0	chr15	82046770	82046790	(19944399)	+	(CG)n	Simple_repeat	1	21	(0)	1362237
486	30.6	2.8	4.0	chr15	82076091	82076339	(19914850)	C	L1ME4c	LINE/L1	(201)	629	384	1362307
2301	26.6	4.1	0.7	chr15	82076358	82076973	(19914216)	+	MER115	DNA/hAT-Tip100	56	693	(0)	1362308
2333	8.1	0.7	0.7	chr15	82835126	82835423	(19155766)	C	AluSc	SINE/Alu	(11)	298	1	1363546
12409	13.9	5.1	3.1	chr15	82904155	82906433	(19084756)	+	L1MCa	LINE/L1	80	2408	(4100)	1363645
626	22.0	9.7	0.0	chr15	83106940	83107098	(18884091)	C	MIR	SINE/MIR	(52)	210	35	1364071
12	19.3	0.0	5.1	chr15	83107382	83107420	(18883769)	+	(GCCGCTG)n	Simple_repeat	1	39	(0)	1364072
12	23.4	1.3	9.0	chr15	83107604	83107680	(18883509)	+	G-rich	Low_complexity	1	78	(0)	1364073
1880	18.8	0.0	1.0	chr15	84617655	84617963	(17373226)	+	AluJb	SINE/Alu	1	306	(6)	1366281
293	26.6	16.3	0.9	chr15	84721331	84721550	(17269639)	C	L4_A_Mam	LINE/RTE-X	(4658)	332	49	1366501
1791	20.7	7.2	13.6	chr15	85002071	85002791	(16988398)	C	MER21C	LTR/ERVL	(69)	869	199	1367098
259	33.5	4.4	6.7	chr15	85030077	85030284	(16960905)	C	L3	LINE/CR1	(189)	3910	3708	1367146
428	33.6	8.0	2.0	chr15	89334120	89334365	(12656824)	+	MIRb	SINE/MIR	5	266	(2)	1374038
12	13.7	6.2	0.0	chr15	89334445	89334476	(12656713)	+	(ACCCAC)n	Simple_repeat	1	34	(0)	1374039
11	28.2	0.0	2.2	chr15	89334706	89334750	(12656439)	+	(CCCCCGG)n	Simple_repeat	1	45	(0)	1374040
1589	19.1	4.2	1.0	chr15	89696960	89697257	(12293932)	C	AluJr	SINE/Alu	(3)	309	2	1374698
2728	21.4	0.8	4.8	chr15	89697258	89697295	(12293894)	C	L1ME1	LINE/L1	(697)	5482	5449	1374694
380	14.7	6.7	3.6	chr15	89697284	89697388	(12293801)	+	L1ME3G	LINE/L1	5599	5687	(487)	1374699
309	26.7	8.2	0.7	chr15	89894364	89894499	(12096690)	C	L1ME3G	LINE/L1	(407)	517	371	1375096
1663	17.4	4.4	1.0	chr15	91052487	91052794	(10938395)	+	MSTA	LTR/ERVL-MaLR	110	428	(0)	1377611
234	18.5	1.8	5.3	chr15	91052857	91052913	(10938276)	C	L1PA13	LINE/L1	(5260)	1525	1471	1377612
301	30.6	10.3	2.4	chr15	91052915	91053136	(10938053)	+	L2c	LINE/L2	3116	3383	(43)	1377613
2213	11.8	0.0	0.3	chr15	91053175	91053479	(10937710)	+	AluSz	SINE/Alu	1	304	(8)	1377614
521	27.6	3.6	0.0	chr15	92340245	92340378	(9650811)	+	MER115	DNA/hAT-Tip100	30	168	(525)	1379707
368	26.4	1.8	3.5	chr15	92340733	92340846	(9650343)	+	MLT1K	LTR/ERVL-MaLR	473	584	(11)	1379708
203	32.9	14.3	4.0	chr15	92419119	92419343	(9571846)	C	L2	LINE/L2	(1314)	2105	1854	1379845
401	20.6	17.1	0.0	chr15	92517843	92517978	(9473211)	C	L3	LINE/CR1	(320)	3779	3616	1379984
564	31.0	14.4	4.3	chr15	92518413	92518692	(9472497)	C	MER115	DNA/hAT-Tip100	(250)	443	131	1379985
338	30.4	5.4	1.7	chr15	92660258	92660434	(9330755)	C	MLT1L	LTR/ERVL-MaLR	(57)	553	370	1380180
1893	9.3	3.5	5.8	chr15	92660912	92661252	(9329937)	C	AluSz	SINE/Alu	(0)	312	3	1380181
909	17.5	1.8	0.0	chr15	92808875	92809040	(9182149)	+	AluJr	SINE/Alu	138	306	(6)	1380509
505	35.8	8.8	6.8	chr15	93315812	93315945	(8675244)	C	L2c	LINE/L2	(0)	3387	3272	1381435
2206	13.7	11.4	0.5	chr15	93315946	93316326	(8674863)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1381436
4971	10.6	3.1	4.5	chr15	94157240	94158031	(7833158)	+	LTR17	LTR/ERV1	1	780	(0)	1382705
705	28.0	11.3	8.0	chr15	94158163	94158540	(7832649)	C	L1M5	LINE/L1	(2573)	3573	3203	1382706
5927	10.4	0.6	0.2	chr15	94757869	94758719	(7232470)	+	HERVH-int	LTR/ERV1	3140	3993	(3720)	1383469
522	6.2	0.0	0.0	chr15	95784656	95784720	(6206469)	+	tRNA-Lys-AAG	tRNA	12	76	(0)	1384933
5931	13.4	1.8	1.2	chr15	95784735	95785682	(6205507)	C	LTR5_Hs	LTR/ERVK	(14)	954	1	1384934
4517	8.5	10.5	12.4	chr15	96135325	96136168	(5855021)	C	LTR12	LTR/ERV1	(0)	826	1	1385421
12	16.3	2.8	2.7	chr15	98852038	98852073	(3139116)	+	(GGTGGAG)n	Simple_repeat	1	37	(0)	1389243
23305	9.0	1.8	1.4	chr15	98987695	98993562	(2997627)	+	L1PA7	LINE/L1	11	5927	(542)	1389405
27	17.8	3.3	5.3	chr15	99251399	99251489	(2739700)	+	(CCGCC)n	Simple_repeat	1	94	(0)	1389847
35	6.8	0.0	0.0	chr15	99733363	99733408	(2257781)	+	(CCGCGAC)n	Simple_repeat	1	46	(0)	1390511
18	24.8	0.0	2.2	chr15	99790753	99790798	(2200391)	+	(AC)n	Simple_repeat	1	46	(0)	1390626
573	31.8	8.3	2.7	chr15	100233697	100234206	(1756983)	C	L2a	LINE/L2	(275)	3151	2595	1391179
14	14.4	5.0	2.4	chr15	100879707	100879746	(1111443)	+	(CCCTC)n	Simple_repeat	1	42	(0)	1392045
1986	23.2	4.3	2.9	chr15	101008173	101008323	(982866)	C	MER89	LTR/ERV1	(399)	160	4	1392221
244	26.5	8.4	0.0	chr15	101295783	101295880	(695309)	C	L1ME3	LINE/L1	(19)	6154	6048	1392606
1889	25.1	8.9	3.5	chr15	101295903	101296655	(694534)	C	L1ME3	LINE/L1	(167)	5995	5168	1392606
318	22.3	8.8	0.0	chr15	101321712	101321814	(669375)	+	MER5A1	DNA/hAT-Charlie	25	137	(29)	1392639
1452	15.4	5.0	0.0	chr15	101446238	101446504	(544685)	C	L1MB3	LINE/L1	(264)	5919	5639	1392795
24	11.2	0.0	0.0	chr15	101489758	101489796	(501393)	+	(CGC)n	Simple_repeat	1	39	(0)	1392850
12	23.5	2.5	0.0	chr15	101489835	101489874	(501315)	+	G-rich	Low_complexity	1	41	(0)	1392851
1180	26.9	3.7	1.8	chr15	101625933	101626440	(364749)	+	L1MDa	LINE/L1	749	1295	(5252)	1393028
28267	2.4	0.1	0.0	chr15	101626451	101632475	(358714)	+	L1PA2	LINE/L1	126	6152	(3)	1393030
1503	15.2	3.0	6.1	chr16	815637	815913	(89522432)	C	AluJr	SINE/Alu	(23)	289	22	1395239
434	26.4	3.0	0.0	chr16	816158	816286	(89522059)	C	L1MC3	LINE/L1	(285)	7500	7368	1395240
17	24.5	0.0	7.7	chr16	914760	914837	(89423508)	+	(TCCC)n	Simple_repeat	1	78	(0)	1395327
29	29.2	0.0	0.0	chr16	1067769	1067859	(89270486)	+	(GTTGTG)n	Simple_repeat	1	91	(0)	1395469
588	24.2	1.8	0.6	chr16	1067860	1068025	(89270320)	+	LTR32	LTR/ERVL	289	456	(1)	1395468
413	26.8	1.8	0.0	chr16	1136405	1136516	(89201829)	C	MER63D	DNA/hAT-Blackjack	(936)	125	12	1395522
770	27.5	5.9	2.3	chr16	1266450	1266791	(89071554)	+	MLT1C	LTR/ERVL-MaLR	6	360	(107)	1395653
2339	11.4	0.3	0.0	chr16	1266889	1267196	(89071149)	+	AluSz	SINE/Alu	1	309	(3)	1395654
20	26.3	3.5	2.3	chr16	1308924	1309008	(89029337)	+	(CGCCCC)n	Simple_repeat	1	88	(0)	1395731
280	19.2	0.0	0.0	chr16	1904333	1904384	(88433961)	+	MER74B	LTR/ERVL	1	52	(570)	1396623
446	33.9	14.6	2.1	chr16	1982934	1983460	(88354885)	+	L2b	LINE/L2	2772	3375	(0)	1396743
28	34.0	1.5	0.8	chr16	1983983	1984112	(88354233)	+	(CCGGCC)n	Simple_repeat	1	132	(0)	1396745
547	17.9	20.9	2.6	chr16	2205007	2205161	(88133184)	+	MER53	DNA/hAT	3	193	(0)	1397036
13	27.1	0.0	2.1	chr16	2205516	2205562	(88132783)	+	G-rich	Low_complexity	1	47	(0)	1397037
2327	7.6	2.6	0.0	chr16	2720517	2720817	(87617528)	C	AluSc8	SINE/Alu	(2)	309	1	1397805
22	14.9	2.2	0.0	chr16	2721287	2721331	(87617014)	+	G-rich	Low_complexity	1	46	(0)	1397806
17	17.8	4.2	6.7	chr16	2721447	2721518	(87616827)	+	(CTCCGC)n	Simple_repeat	1	75	(0)	1397807
13	11.1	9.3	5.1	chr16	2752706	2752759	(87585586)	+	(GAGGC)n	Simple_repeat	1	59	(0)	1397879
909	29.0	5.9	0.9	chr16	2828244	2828567	(87509778)	C	MER58B	DNA/hAT-Charlie	(0)	341	1	1397990
294	27.7	12.4	1.3	chr16	2828988	2829137	(87509208)	C	MIR	SINE/MIR	(80)	182	14	1397991
2437	8.0	0.0	0.3	chr16	2994226	2994527	(87343818)	+	AluSq2	SINE/Alu	1	301	(12)	1398312
2114	10.4	0.0	6.1	chr16	3090768	3091093	(87247252)	+	AluSz	SINE/Alu	1	306	(6)	1398468
3176	18.0	2.5	0.8	chr16	3200874	3201510	(87136835)	C	L1MB4	LINE/L1	(68)	6112	5465	1398724
13	0.0	0.0	0.0	chr16	3665844	3665860	(86672485)	+	(GCA)n	Simple_repeat	1	17	(0)	1399584
3013	18.5	5.9	8.5	chr16	4539708	4540143	(85798202)	+	LTR8	LTR/ERV1	255	690	(1)	1401338
199	33.0	11.5	0.9	chr16	4540241	4540356	(85797989)	C	L2a	LINE/L2	(241)	3185	3056	1401340
233	31.9	0.0	16.1	chr16	4540368	4540450	(85797895)	C	L2a	LINE/L2	(456)	2963	2884	1401340
2203	9.4	2.7	0.0	chr16	4540451	4540738	(85797607)	+	AluSz	SINE/Alu	1	296	(16)	1401341
14	5.0	0.0	0.0	chr16	4746952	4746972	(85591373)	+	(GAG)n	Simple_repeat	1	21	(0)	1401770
1044	15.1	0.0	1.1	chr16	5055751	5055937	(85282408)	C	MER53	DNA/hAT	(6)	187	3	1402469
73	0.0	0.0	0.0	chr16	5055939	5056000	(85282345)	+	(GT)n	Simple_repeat	1	62	(0)	1402470
2094	11.7	1.6	1.6	chr16	5186888	5187030	(85151315)	+	AluSc	SINE/Alu	168	309	(0)	1402769
2601	17.8	0.9	4.7	chr16	5187039	5187127	(85151218)	C	LTR9D	LTR/ERV1	(113)	532	450	1402767
2433	7.2	0.0	1.3	chr16	5187128	5187434	(85150911)	C	AluY	SINE/Alu	(8)	303	1	1402771
532	27.2	9.4	3.2	chr16	11484484	11484703	(78853642)	+	L1ME3A	LINE/L1	5931	6165	(8)	1415793
22	25.8	2.3	3.3	chr16	11484903	11484990	(78853355)	+	(TCTGGC)n	Simple_repeat	1	90	(0)	1415794
1825	18.2	2.3	0.0	chr16	14178742	14179037	(76159308)	C	AluJb	SINE/Alu	(4)	308	6	1421635
537	27.9	5.1	0.4	chr16	14179045	14179285	(76159060)	C	Charlie29a	DNA/hAT-Charlie	(70)	649	397	1421634
632	19.3	6.9	1.7	chr16	14286994	14287172	(76051173)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1421774
2123	11.9	0.3	0.6	chr16	14287193	14287541	(76050804)	C	AluSz	SINE/Alu	(0)	312	1	1421775
357	23.5	0.0	2.9	chr16	18983688	18983792	(71354553)	C	L1PA17	LINE/L1	(1)	6165	6064	1432376
18	10.8	0.0	0.0	chr16	18983990	18984019	(71354326)	+	(GGC)n	Simple_repeat	1	30	(0)	1432377
275	27.8	8.3	1.4	chr16	21557876	21558021	(68780324)	+	MamRep605	LTR?	112	268	(581)	1438140
326	31.4	10.4	2.9	chr16	21558024	21558439	(68779906)	C	L2b	LINE/L2	(2)	3373	2923	1438141
2306	9.2	1.0	0.0	chr16	21558496	21558790	(68779555)	C	AluSx	SINE/Alu	(6)	306	9	1438142
686	16.5	0.0	3.6	chr16	22133212	22133349	(68204996)	+	L1MB3	LINE/L1	6044	6176	(7)	1439346
297	28.7	11.8	1.9	chr16	22233074	22233233	(68105112)	+	L1ME4c	LINE/L1	540	717	(113)	1439604
12	18.8	5.8	3.6	chr16	23558049	23558100	(66780245)	+	(CGGCAGC)n	Simple_repeat	1	55	(0)	1442575
12	27.3	2.0	2.0	chr16	27109836	27109885	(63228460)	+	(GCG)n	Simple_repeat	1	51	(0)	1450386
238	29.7	9.2	5.2	chr16	27124599	27124733	(63213612)	+	MIR3	SINE/MIR	19	159	(49)	1450420
636	25.9	16.9	0.0	chr16	27124772	27124983	(63213362)	+	MIR	SINE/MIR	6	260	(2)	1450421
277	34.3	5.8	7.4	chr16	27229102	27229466	(63108879)	+	L2b	LINE/L2	2986	3344	(31)	1450655
2244	12.0	0.0	1.3	chr16	27229570	27229878	(63108467)	C	AluSq2	SINE/Alu	(8)	305	1	1450656
26	8.9	3.9	1.9	chr16	27887764	27887814	(62450531)	+	(CTTTT)n	Simple_repeat	1	53	(0)	1452147
195	2.0	0.5	1.9	chr16	27888378	27888584	(62449761)	+	(TTCT)n	Simple_repeat	1	208	(0)	1452148
1032	18.5	3.1	7.5	chr16	28071125	28071262	(62267083)	C	Tigger4a	DNA/TcMar-Tigger	(7)	229	103	1452606
20	31.1	3.9	0.9	chr16	29812107	29812217	(60526128)	+	G-rich	Low_complexity	1	114	(0)	1456616
11	24.4	0.0	0.0	chr16	29974030	29974063	(60364282)	+	G-rich	Low_complexity	1	34	(0)	1457008
2615	4.7	0.0	0.0	chr16	30547533	30547831	(59790514)	+	AluY	SINE/Alu	1	299	(12)	1458309
12089	16.4	1.7	2.9	chr16	30547832	30548317	(59790028)	C	HERVFH21-int	LTR/ERV1	(6034)	495	1	1458305
3128	8.4	8.7	0.5	chr16	30548318	30548758	(59789587)	C	LTR21A	LTR/ERV1	(0)	481	1	1458305
16	13.2	0.0	0.0	chr16	30615225	30615249	(59723096)	+	(T)n	Simple_repeat	1	25	(0)	1458483
19	11.7	2.7	0.0	chr16	30893950	30893986	(59444359)	+	(CGGGGC)n	Simple_repeat	1	38	(0)	1459122
24	24.8	4.8	2.7	chr16	30894116	30894220	(59444125)	+	(CCGGC)n	Simple_repeat	1	110	(0)	1459123
250	26.2	0.0	3.2	chr16	30894500	30894562	(59443783)	C	L2c	LINE/L2	(0)	3387	3327	1459124
719	29.3	7.0	3.1	chr16	31451467	31451755	(58886590)	C	L1MC4	LINE/L1	(1281)	6761	6461	1460346
1998	13.4	0.7	0.0	chr16	31452061	31452343	(58886002)	C	AluJo	SINE/Alu	(19)	293	9	1460348
521	25.6	10.0	4.4	chr16	32001288	32001561	(58336784)	C	L1MEh	LINE/L1	(666)	1569	1279	1461043
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
1588	14.5	0.3	0.7	chr16	33571457	33571747	(56766598)	C	TAR1	Satellite/telo	(297)	1814	1525	1462831
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
14	8.2	3.9	0.0	chr16	46831050	46831075	(43507270)	+	(CCGC)n	Simple_repeat	1	27	(0)	1466114
1956	10.5	6.3	0.1	chr16	46993744	46994051	(43344294)	+	MER51B	LTR/ERV1	71	377	(0)	1466489
25177	6.2	0.3	0.4	chr16	47347060	47353218	(42985127)	+	L1PA4	LINE/L1	2	6153	(2)	1467068
1637	19.8	0.3	0.7	chr16	48449254	48449546	(41888799)	+	AluJo	SINE/Alu	11	302	(10)	1468819
10228	5.8	0.5	6.3	chr16	48482437	48483903	(41854442)	C	SVA_B	Retroposon/SVA	(0)	1383	2	1468885
1375	14.5	6.1	0.4	chr16	49951234	49951482	(40386863)	+	L1MD3	LINE/L1	7730	7993	(2)	1471450
2371	6.9	0.7	0.0	chr16	49986071	49986360	(40351985)	C	AluSp	SINE/Alu	(21)	292	1	1471522
1936	12.7	2.8	0.0	chr16	49986473	49986928	(40351417)	C	MER51A	LTR/ERV1	(0)	634	1	1471523
1638	24.6	5.4	3.2	chr16	51807014	51807483	(38530862)	C	MLT1B-int	LTR/ERVL-MaLR	(0)	1371	891	1474994
360	24.2	1.1	0.0	chr16	51807550	51807640	(38530705)	C	MLT-int	LTR/ERVL-MaLR	(968)	767	676	1474996
2238	17.9	3.7	5.4	chr16	51807755	51808178	(38530167)	C	MLT1B-int	LTR/ERVL-MaLR	(635)	736	321	1474994
2960	18.9	6.0	1.5	chr16	53396753	53396914	(36941431)	+	L1ME1	LINE/L1	1292	1458	(6059)	1477773
28247	2.6	0.3	0.0	chr16	53396917	53402916	(36935429)	+	L1PA3	LINE/L1	138	6155	(0)	1477775
9309	7.4	1.3	3.5	chr16	53624781	53626158	(36712187)	+	SVA_A	Retroposon/SVA	40	1387	(0)	1478159
358	28.0	4.7	7.1	chr16	54081809	54081962	(36256383)	+	MER129	LTR?	34	183	(286)	1478869
315	21.2	2.4	0.0	chr16	54164690	54164769	(36173576)	+	MER53	DNA/hAT	111	192	(1)	1479006
13056	10.8	1.1	1.9	chr16	54661371	54665244	(35673101)	+	L1P3	LINE/L1	11	3892	(2569)	1479930
4941	14.1	1.6	4.4	chr16	55242165	55242986	(35095359)	+	LTR1A1	LTR/ERV1	1	799	(0)	1481049
27140	3.6	0.2	0.2	chr16	56154515	56160662	(34177683)	+	L1PA3	LINE/L1	7	6155	(0)	1482612
232	26.7	5.0	1.6	chr16	56932555	56932644	(33405701)	+	MIR3	SINE/MIR	42	136	(94)	1483995
20	9.2	0.0	2.7	chr16	57245497	57245533	(33092812)	+	(GGGCC)n	Simple_repeat	1	37	(0)	1484629
311	30.2	13.1	0.0	chr16	57476248	57476386	(32861959)	C	MIR	SINE/MIR	(3)	259	100	1485139
313	33.8	7.3	0.0	chr16	58025103	58025241	(32313104)	C	MIRb	SINE/MIR	(108)	160	11	1486283
15	16.5	0.0	2.8	chr16	65121949	65121984	(25216361)	+	(CAGTCC)n	Simple_repeat	1	36	(0)	1497455
17	14.0	2.4	2.4	chr16	65122111	65122151	(25216194)	+	(GGCG)n	Simple_repeat	1	42	(0)	1497456
1817	18.1	7.5	11.2	chr16	66152244	66152388	(24185957)	+	MER54A	LTR/ERVL	349	453	(448)	1499184
372	29.0	2.0	5.2	chr16	66152688	66152840	(24185505)	+	MIR3	SINE/MIR	61	208	(0)	1499186
9139	6.0	18.3	0.1	chr16	66974097	66975386	(23362959)	+	LTR12C	LTR/ERV1	2	1579	(0)	1500792
15	13.8	0.0	2.9	chr16	67279460	67279493	(23058852)	+	(GGCGC)n	Simple_repeat	1	34	(0)	1501370
1850	12.6	7.3	0.0	chr16	68520091	68520368	(21817977)	C	AluSg	SINE/Alu	(9)	301	2	1503685
920	3.5	14.7	0.0	chr16	68520369	68520484	(21817861)	C	AluSq10	SINE/Alu	(177)	136	1	1503686
14	14.4	5.0	2.4	chr16	68520940	68520979	(21817366)	+	(CAGGCC)n	Simple_repeat	1	42	(0)	1503687
942	15.7	0.0	0.0	chr16	68540691	68540824	(21797521)	+	FLAM_C	SINE/Alu	2	135	(8)	1503730
1144	9.7	8.4	27.1	chr16	68540912	68541024	(21797321)	C	AluSc5	SINE/Alu	(12)	297	212	1503731
2171	11.8	0.6	1.3	chr16	68541025	68541337	(21797008)	C	AluSz	SINE/Alu	(1)	311	1	1503732
1971	12.5	4.8	0.0	chr16	68581414	68581708	(21756637)	C	AluSx1	SINE/Alu	(2)	310	1	1503804
13	24.9	2.0	2.0	chr16	69311577	69311625	(21026720)	+	G-rich	Low_complexity	1	50	(0)	1505548
4599	19.1	11.9	6.4	chr16	69375747	69376563	(20961782)	C	L1ME1	LINE/L1	(689)	5888	5007	1505662
1691	18.3	0.0	5.4	chr16	69376564	69376880	(20961465)	+	AluJb	SINE/Alu	1	300	(12)	1505666
4599	19.8	11.3	6.5	chr16	69376881	69376918	(20961427)	C	L1ME1	LINE/L1	(1538)	5006	5006	1505662
2418	7.8	0.0	0.0	chr16	71565158	71565453	(18772892)	C	AluSg	SINE/Alu	(14)	296	1	1509920
8721	8.7	0.6	0.0	chr16	72695347	72696524	(17641821)	C	L1PA4	LINE/L1	(4968)	1187	3	1511873
228	36.7	0.7	5.2	chr16	72846531	72846685	(17491660)	C	MER91A	DNA/hAT-Tip100	(48)	148	1	1512053
346	27.3	1.5	7.7	chr16	74907215	74907254	(15431091)	C	L1MEd	LINE/L1	(6950)	136	97	1515686
2209	12.4	4.5	1.6	chr16	74907255	74907624	(15430721)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1515687
1384	8.7	16.0	1.9	chr16	75167488	75167610	(15170735)	C	L1P4	LINE/L1	(375)	5791	5667	1516244
1486	18.9	3.5	2.1	chr16	75167611	75167814	(15170531)	C	AluJr	SINE/Alu	(23)	289	81	1516245
1555	14.9	12.1	0.0	chr16	75167815	75168076	(15170269)	+	AluSx	SINE/Alu	1	298	(14)	1516246
11	18.9	0.0	7.1	chr16	75265853	75265894	(15072451)	+	G-rich	Low_complexity	1	42	(0)	1516406
17	27.5	3.3	0.0	chr16	75265985	75266045	(15072300)	+	(GCC)n	Simple_repeat	1	63	(0)	1516407
236	28.0	1.8	9.3	chr16	75494345	75494462	(14843883)	+	MIR1_Amn	SINE/MIR	69	177	(53)	1516921
4442	14.4	1.2	0.6	chr16	76034774	76035695	(14302650)	C	HERV4_I-int	LTR/ERV1	(7139)	1780	688	1517829
215	32.5	11.8	0.8	chr16	78101771	78101891	(12236454)	C	L2b	LINE/L2	(5)	3370	3235	1521136
1186	19.2	4.4	0.0	chr16	78101992	78102210	(12236135)	C	AluJr	SINE/Alu	(83)	229	1	1521137
1007	20.0	4.1	1.4	chr16	78223166	78223378	(12114967)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1521341
18	7.5	0.0	0.0	chr16	78286696	78286723	(12051622)	+	(AAAAT)n	Simple_repeat	1	28	(0)	1521462
355	27.8	1.6	5.3	chr16	79295735	79295867	(11042478)	C	MIRb	SINE/MIR	(17)	251	124	1523274
308	25.1	6.7	0.8	chr16	79296101	79296211	(11042134)	+	MIR	SINE/MIR	104	229	(39)	1523275
523	24.9	4.9	6.5	chr16	79895510	79895694	(10442651)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	1524358
181	29.7	1.9	5.6	chr16	79896124	79896230	(10442115)	+	MIRb	SINE/MIR	54	156	(112)	1524359
744	27.9	5.0	7.3	chr16	81608176	81608543	(8729802)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	237	1527627
8039	12.8	3.4	2.8	chr16	81977044	81977353	(8360992)	+	L1PA16	LINE/L1	3904	4210	(2639)	1528421
17936	3.8	0.1	0.4	chr16	81977354	81978467	(8359878)	+	L1PA3	LINE/L1	124	1237	(4918)	1528424
23503	11.8	1.2	2.1	chr16	82303425	82309864	(8028481)	C	L1PA7	LINE/L1	(5)	6464	16	1528994
13	27.1	3.4	1.6	chr16	84025603	84025661	(6312684)	+	(ACCC)n	Simple_repeat	1	61	(0)	1532054
2193	11.5	1.0	0.0	chr16	84026231	84026526	(6311819)	C	AluSx	SINE/Alu	(13)	299	1	1532055
622	30.0	13.9	4.5	chr16	84530237	84530637	(5807708)	+	LTR33	LTR/ERVL	3	447	(68)	1532995
265	19.0	44.1	1.0	chr16	84530717	84530818	(5807527)	+	MIR	SINE/MIR	19	164	(98)	1532996
322	22.1	1.4	0.0	chr16	84530820	84530887	(5807458)	+	MER5A1	DNA/hAT-Charlie	2	70	(96)	1532997
2616	25.7	5.4	5.7	chr16	84797960	84798411	(5539934)	+	L1M4	LINE/L1	3828	4263	(1883)	1533584
853	13.6	0.0	0.0	chr16	84798412	84798529	(5539816)	+	AluJr	SINE/Alu	1	118	(194)	1533588
2615	17.9	7.2	1.1	chr16	85334688	85335208	(5003137)	+	MER34C2	LTR/ERV1	1	555	(0)	1534656
505	23.8	3.2	5.0	chr16	85412759	85412917	(4925428)	C	MLT1D	LTR/ERVL-MaLR	(349)	156	1	1534784
185	22.6	0.0	3.6	chr16	85569173	85569227	(4769118)	+	L2c	LINE/L2	3021	3073	(314)	1535076
519	33.5	4.4	2.0	chr16	85569343	85569586	(4768759)	+	MIR	SINE/MIR	12	261	(1)	1535077
1863	16.0	7.4	0.2	chr16	85628877	85629265	(4709080)	+	MSTB	LTR/ERVL-MaLR	1	410	(16)	1535156
1779	15.4	2.4	0.3	chr16	85686944	85687229	(4651116)	+	AluJb	SINE/Alu	1	292	(20)	1535210
13	23.9	3.9	1.9	chr16	85750985	85751035	(4587310)	+	(GGC)n	Simple_repeat	1	53	(0)	1535375
981	31.2	11.3	0.4	chr16	85950974	85951478	(4386867)	+	MER90a	LTR/ERV1	1	608	(6)	1535734
580	27.2	13.4	2.6	chr16	86325078	86325383	(4012962)	+	MLT1J2	LTR/ERVL-MaLR	64	407	(41)	1536443
298	29.7	7.6	1.9	chr16	87057199	87057359	(3280986)	C	LTR83	LTR/ERVL	(59)	721	551	1537723
251	28.8	0.0	0.0	chr16	87057454	87057519	(3280826)	+	MLT1J	LTR/ERVL-MaLR	109	174	(338)	1537724
407	21.9	0.0	0.0	chr16	87057746	87057818	(3280527)	C	LTR83	LTR/ERVL	(411)	369	297	1537723
248	26.8	11.3	5.2	chr16	87246699	87246845	(3091500)	C	MIR	SINE/MIR	(99)	169	18	1538079
452	31.8	4.8	3.1	chr16	87472170	87472388	(2865957)	+	MIRb	SINE/MIR	12	247	(21)	1538479
720	25.7	10.6	1.1	chr16	87791869	87792132	(2546213)	C	MLT1C	LTR/ERVL-MaLR	(116)	351	60	1539076
14	21.8	0.0	0.0	chr16	87855005	87855041	(2483304)	+	(GGCCAG)n	Simple_repeat	1	37	(0)	1539175
15	21.1	0.0	2.9	chr16	87855448	87855482	(2482863)	+	(CA)n	Simple_repeat	1	35	(0)	1539176
2171	6.4	0.7	0.7	chr16	87950441	87950735	(2387610)	C	AluSx1	SINE/Alu	(17)	295	1	1539392
2242	8.7	0.0	0.3	chr16	87967623	87967920	(2370425)	C	AluSg	SINE/Alu	(13)	297	1	1539418
1977	11.1	1.3	2.5	chr16	87967921	87968053	(2370292)	C	AluSx	SINE/Alu	(179)	133	1	1539417
2177	12.8	0.0	0.3	chr16	88485439	88485735	(1852610)	C	AluJo	SINE/Alu	(12)	300	5	1540021
197	29.4	4.5	2.3	chr16	88515347	88515433	(1822912)	+	MIRc	SINE/MIR	47	135	(133)	1540053
2475	9.3	0.3	0.0	chr16	88594870	88595180	(1743165)	+	AluSp	SINE/Alu	1	312	(1)	1540192
353	24.6	4.8	9.2	chr16	88595181	88595240	(1743105)	C	L1ME3E	LINE/L1	(93)	6149	6094	1540191
226	27.1	4.0	1.0	chr16	88928123	88928219	(1410126)	+	MLT1G3	LTR/ERVL-MaLR	480	579	(16)	1540606
370	26.1	21.0	1.7	chr16	88928685	88929126	(1409219)	C	L2a	LINE/L2	(82)	3293	2734	1540607
1128	25.7	13.6	3.7	chr16	88995407	88996098	(1342247)	+	MER21C	LTR/ERVL	18	879	(59)	1540674
365	28.8	3.8	9.8	chr16	89241276	89241529	(1096816)	C	LTR55	LTR/ERVL?	(181)	367	130	1540967
13	9.8	0.0	0.0	chr16	89850472	89850493	(487852)	+	(GAG)n	Simple_repeat	1	22	(0)	1541972
1011	20.3	4.2	4.2	chr17	168713	168953	(83088488)	+	THE1B	LTR/ERVL-MaLR	124	364	(0)	1544722
1107	19.0	3.6	11.1	chr17	169130	169490	(83087951)	+	L1MB2	LINE/L1	5795	6127	(44)	1544723
251	27.2	2.6	7.3	chr17	373767	373889	(82883552)	C	MLT1N2	LTR/ERVL-MaLR	(20)	542	426	1545070
284	25.2	8.5	7.0	chr17	374029	374129	(82883312)	+	L1ME3A	LINE/L1	6044	6143	(30)	1545071
1815	13.6	7.9	0.0	chr17	374130	374408	(82883033)	C	AluJb	SINE/Alu	(8)	304	2	1545072
856	21.2	0.0	2.6	chr17	389252	389445	(82867996)	C	MER20	DNA/hAT-Charlie	(0)	219	31	1545104
12	11.1	3.2	3.1	chr17	389934	389964	(82867477)	+	GA-rich	Low_complexity	1	32	(0)	1545105
1136	21.4	0.6	0.9	chr17	429496	429753	(82827688)	+	L1P5	LINE/L1	5451	5707	(449)	1545209
2782	17.1	0.4	0.2	chr17	429860	430335	(82827106)	+	L1PB4	LINE/L1	5679	6155	(1)	1545210
548	29.2	11.1	1.4	chr17	840980	841191	(82416250)	+	MIR	SINE/MIR	9	243	(19)	1545881
1975	13.0	0.0	0.3	chr17	903390	903682	(82353759)	C	AluJb	SINE/Alu	(20)	292	1	1546003
536	24.2	4.5	0.0	chr17	903685	903812	(82353629)	C	MIRb	SINE/MIR	(48)	220	87	1546004
2230	8.9	0.0	2.0	chr17	980696	980997	(82276444)	+	AluSg4	SINE/Alu	1	296	(14)	1546162
180	26.9	4.9	0.0	chr17	1020942	1021019	(82236422)	C	MIRb	SINE/MIR	(181)	87	6	1546227
2246	12.0	0.0	0.3	chr17	1094371	1094670	(82162771)	C	AluSx1	SINE/Alu	(12)	300	2	1546343
33	0.0	0.0	0.0	chr17	1400607	1400637	(81856804)	+	(TTTTCTT)n	Simple_repeat	1	31	(0)	1547031
19	29.2	1.1	3.4	chr17	1491734	1491821	(81765620)	+	(GCCCC)n	Simple_repeat	1	89	(0)	1547244
2161	10.1	0.3	0.0	chr17	2691282	2691568	(80565873)	+	AluSg	SINE/Alu	1	288	(22)	1549736
39	7.3	5.3	2.5	chr17	2691922	2691997	(80565444)	+	(CCCGCC)n	Simple_repeat	1	80	(0)	1549737
15	9.8	0.0	0.0	chr17	2903487	2903508	(80353933)	+	(TG)n	Simple_repeat	1	22	(0)	1550217
590	36.5	7.5	1.4	chr17	3256721	3257350	(80000091)	+	L2a	LINE/L2	2471	3145	(281)	1550786
671	33.9	8.5	4.9	chr17	4094449	4095489	(79161952)	+	L2b	LINE/L2	2308	3362	(13)	1552328
1943	13.1	0.0	0.7	chr17	4857459	4857767	(78399674)	C	AluSx3	SINE/Alu	(0)	311	1	1553931
333	28.6	4.9	5.8	chr17	4966331	4966434	(78291007)	+	MIR	SINE/MIR	4	106	(156)	1554150
7761	20.5	6.0	2.3	chr17	5203046	5204204	(78053237)	+	MLT1A0-int	LTR/ERVL-MaLR	520	1735	(0)	1554607
3101	26.4	9.3	4.4	chr17	5543881	5544783	(77712658)	+	MER45C	DNA/hAT-Tip100	2	953	(0)	1555357
792	34.0	5.0	5.1	chr17	5699089	5699527	(77557914)	+	L2b	LINE/L2	2941	3375	(0)	1555637
12	9.9	2.6	7.7	chr17	5699933	5699970	(77557471)	+	(CCCTCT)n	Simple_repeat	1	39	(0)	1555639
3717	12.5	2.6	5.3	chr17	5822412	5823038	(77434403)	C	LTR1A2	LTR/ERV1	(2)	835	226	1555875
810	12.4	39.5	0.5	chr17	5823039	5823248	(77434193)	C	AluSx	SINE/Alu	(13)	299	8	1555876
2354	7.4	1.0	0.0	chr17	7304495	7304791	(75952650)	C	AluYh3	SINE/Alu	(11)	300	1	1558602
1355	19.1	2.5	3.9	chr17	7304792	7304892	(75952549)	C	L1MB5	LINE/L1	(488)	5686	5587	1558601
12	17.7	3.1	0.0	chr17	7330365	7330417	(75927024)	+	(GGCAGG)n	Simple_repeat	1	54	(0)	1558628
232	30.5	3.6	9.9	chr17	7548612	7548822	(75708619)	+	MER21A	LTR/ERVL	114	310	(621)	1559064
15	9.2	8.6	0.0	chr17	7549229	7549277	(75708164)	+	G-rich	Low_complexity	1	53	(0)	1559065
31	28.2	2.5	1.6	chr17	7561967	7562077	(75695364)	+	(GGC)n	Simple_repeat	1	145	(0)	1559082
13	20.8	0.0	0.0	chr17	7562078	7562110	(75695331)	+	(GCGGC)n	Simple_repeat	1	33	(0)	1559083
14	24.1	0.0	0.0	chr17	7990074	7990112	(75267329)	+	G-rich	Low_complexity	1	39	(0)	1559894
2454	8.4	0.0	0.0	chr17	8177919	8178229	(75079212)	C	AluY	SINE/Alu	(0)	311	1	1560235
2091	11.9	0.0	5.2	chr17	8178276	8178603	(75078838)	+	AluSx	SINE/Alu	1	311	(1)	1560236
584	22.3	0.8	3.0	chr17	8178614	8178747	(75078694)	+	FLAM_C	SINE/Alu	1	131	(2)	1560237
361	11.7	6.2	0.0	chr17	8348719	8348778	(74908663)	C	MER102a	DNA/hAT-Charlie	(1)	329	266	1560620
605	21.8	0.8	0.0	chr17	8348824	8348947	(74908494)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	445	1560621
2403	14.6	2.5	2.2	chr17	8348982	8349214	(74908227)	C	L1MA8	LINE/L1	(20)	6271	6034	1560622
2390	6.6	3.5	1.0	chr17	8384117	8384403	(74873038)	C	AluSq	SINE/Alu	(16)	297	1	1560700
608	27.1	6.1	2.3	chr17	8384512	8384730	(74872711)	C	MIR	SINE/MIR	(0)	262	35	1560702
15	31.5	0.0	1.6	chr17	8435787	8435850	(74821591)	+	(CCCGC)n	Simple_repeat	1	64	(0)	1560832
223	30.2	4.5	0.9	chr17	9677400	9677506	(73579935)	+	L3	LINE/CR1	3665	3775	(324)	1563186
357	32.9	5.0	2.6	chr17	9677783	9677938	(73579503)	C	L1ME3	LINE/L1	(11)	6151	5992	1563187
13	15.6	3.4	8.2	chr17	10198453	10198511	(73058930)	+	(CGGCGCC)n	Simple_repeat	1	61	(0)	1564239
33	2.9	0.0	0.0	chr17	10198741	10198775	(73058666)	+	(GGCCGG)n	Simple_repeat	1	35	(0)	1564240
18	30.0	1.1	4.3	chr17	10198847	10198938	(73058503)	+	(GGCG)n	Simple_repeat	1	93	(0)	1564241
21	14.5	0.0	0.0	chr17	12020906	12020943	(71236498)	+	(GCG)n	Simple_repeat	1	38	(0)	1567443
16	21.6	1.7	5.0	chr17	12021285	12021343	(71236098)	+	(CCGCCC)n	Simple_repeat	1	60	(0)	1567444
671	32.5	9.8	2.1	chr17	12223378	12223855	(71033586)	C	LTR89	LTR/ERVL?	(19)	860	342	1567733
914	29.0	14.9	5.4	chr17	12412425	12413110	(70844331)	C	LTR78	LTR/ERV1	(2)	1302	540	1568027
1372	10.9	0.0	0.0	chr17	12413151	12413315	(70844126)	C	AluSx1	SINE/Alu	(14)	298	134	1568028
12	9.7	0.0	0.0	chr17	12789487	12789508	(70467933)	+	(GCCA)n	Simple_repeat	1	22	(0)	1568663
17	19.8	1.7	6.6	chr17	12789616	12789675	(70467766)	+	(GCG)n	Simple_repeat	1	61	(0)	1568664
2283	8.3	0.0	2.6	chr17	13292733	13293034	(69964407)	C	AluSg7	SINE/Alu	(15)	294	1	1569538
1621	27.9	2.5	2.9	chr17	13458455	13458934	(69798507)	+	LTR16B1	LTR/ERVL	3	480	(0)	1569821
2912	25.5	8.0	3.1	chr17	13937401	13938725	(69318716)	+	L1MD2	LINE/L1	2132	3405	(3601)	1570614
5383	14.7	3.5	0.3	chr17	13938726	13939497	(69317944)	+	LTR1A1	LTR/ERV1	2	799	(0)	1570618
531	19.4	4.6	7.1	chr17	15643897	15644051	(67613390)	C	MER21C	LTR/ERVL	(4)	934	784	1573428
1694	19.9	1.7	6.8	chr17	15644046	15644183	(67613258)	C	MER21C	LTR/ERVL	(394)	544	421	1573428
2275	10.6	0.0	1.3	chr17	15644184	15644486	(67612955)	C	AluSz	SINE/Alu	(10)	302	4	1573429
2269	10.3	0.0	0.3	chr17	15955718	15956008	(67301433)	C	AluSz	SINE/Alu	(11)	301	12	1573964
195	29.9	3.6	8.2	chr17	15972603	15972748	(67284693)	+	L2c	LINE/L2	3216	3354	(33)	1573998
1534	13.9	0.0	3.4	chr17	15972749	15972985	(67284456)	C	AluJb	SINE/Alu	(8)	304	76	1573999
6911	11.8	9.1	0.6	chr17	16539969	16541729	(66715712)	+	HUERS-P3b-int	LTR/ERV1	747	2658	(4760)	1575188
209	36.7	9.1	0.9	chr17	17755061	17755291	(65502150)	+	L2c	LINE/L2	3136	3387	(0)	1577290
24	11.9	4.1	6.6	chr17	17783185	17783257	(65474184)	+	G-rich	Low_complexity	1	76	(0)	1577345
12	8.9	4.2	0.0	chr17	17783342	17783365	(65474076)	+	(GGC)n	Simple_repeat	1	25	(0)	1577346
14	27.1	1.4	5.4	chr17	17783638	17783710	(65473731)	+	(GCCCGC)n	Simple_repeat	1	74	(0)	1577347
41	9.7	1.5	0.0	chr17	18039406	18039471	(65217970)	+	(GT)n	Simple_repeat	1	67	(0)	1577827
14	25.7	0.0	5.4	chr17	18039735	18039790	(65217651)	+	(CCG)n	Simple_repeat	1	56	(0)	1577828
224	13.2	0.5	4.7	chr17	18088113	18088165	(65169276)	+	MIR1_Amn	SINE/MIR	112	163	(105)	1577927
370	30.9	4.7	4.1	chr17	18220929	18221088	(65036353)	C	MIR	SINE/MIR	(88)	174	25	1578179
2213	10.5	0.0	1.4	chr17	18720565	18720859	(64536582)	+	AluSz	SINE/Alu	4	294	(18)	1578995
1685	20.5	2.3	8.5	chr17	18720860	18721005	(64536436)	+	MER21B	LTR/ERVL	318	442	(426)	1578994
572	19.4	4.6	7.1	chr17	18721000	18721154	(64536287)	+	MER21B	LTR/ERVL	784	934	(4)	1578994
1513	22.4	9.4	5.6	chr17	18994145	18994734	(64262707)	+	L1MEc	LINE/L1	37	651	(5749)	1579573
389	30.7	8.0	6.8	chr17	19996964	19997120	(63260321)	C	L1M5	LINE/L1	(2033)	4113	3964	1581734
3138	17.6	2.8	1.4	chr17	21478686	21479251	(61778190)	+	MER34D	LTR/ERV1	1	574	(5)	1584323
51	16.9	3.4	1.6	chr17	21551683	21551801	(61705640)	+	G-rich	Low_complexity	1	123	(0)	1584443
208	31.7	9.8	4.7	chr17	21691572	21691677	(61565764)	C	MIR	SINE/MIR	(145)	117	6	1584654
262	32.2	12.6	0.0	chr17	21691739	21691912	(61565529)	+	L2b	LINE/L2	3134	3332	(43)	1584655
811	30.7	8.8	3.9	chr17	22374776	22375445	(60881996)	+	SST1	Satellite/centr	847	1552	(11)	1585408
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
9140	3.2	1.4	25.8	chr17	28603477	28605306	(54652135)	C	SVA_D	Retroposon/SVA	(4)	1382	5	1589001
32	12.1	3.9	3.8	chr17	28726266	28726342	(54531099)	+	(GCCCCC)n	Simple_repeat	1	80	(0)	1589203
15	25.3	1.9	1.8	chr17	30379573	30379626	(52877815)	+	(GCGGCC)n	Simple_repeat	1	55	(0)	1592485
260	25.8	2.9	0.0	chr17	30379998	30380063	(52877378)	C	MIR3	SINE/MIR	(12)	196	129	1592486
289	26.9	11.2	3.9	chr17	30380091	30380281	(52877160)	C	MIRb	SINE/MIR	(23)	245	30	1592487
23927	6.8	0.3	1.0	chr17	30406815	30413023	(52844418)	C	L1PA6	LINE/L1	(0)	6154	5	1592535
2258	11.7	0.3	0.0	chr17	30693355	30693661	(52563780)	C	AluSx1	SINE/Alu	(4)	308	1	1593055
224	24.5	2.9	1.3	chr17	31425916	31425999	(51831442)	+	MIR3	SINE/MIR	72	153	(55)	1594543
388	34.1	1.3	11.2	chr17	31901101	31901351	(51356090)	+	L2c	LINE/L2	3161	3386	(1)	1595593
19	20.9	1.3	6.6	chr17	32341902	32341976	(50915465)	+	G-rich	Low_complexity	1	76	(0)	1596597
18	22.1	7.5	3.0	chr17	32341977	32341991	(50915450)	+	(GGCCG)n	Simple_repeat	5	101	(0)	1596598
18	19.1	3.7	7.1	chr17	32486611	32486692	(50770749)	+	(GGCG)n	Simple_repeat	1	85	(0)	1596915
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
566	13.2	28.2	1.3	chr17	33003270	33003407	(50254034)	C	AluJb	SINE/Alu	(27)	285	111	1597780
439	29.9	13.8	6.8	chr17	33003410	33003732	(50253709)	+	L2a	LINE/L2	3076	3424	(2)	1597778
745	21.9	5.0	8.4	chr17	34352933	34353220	(48904221)	+	ERVL-E-int	LTR/ERVL	1053	1364	(4303)	1600229
284	22.6	0.0	0.0	chr17	34353232	34353284	(48904157)	C	MER5A	DNA/hAT-Charlie	(3)	186	134	1600230
737	6.4	3.5	0.9	chr17	35393839	35393948	(47863493)	C	LTR46	LTR/ERV1	(0)	460	348	1602165
26368	3.2	0.4	0.0	chr17	35393950	35399945	(47857496)	+	L1PA3	LINE/L1	124	6144	(11)	1602166
6966	10.4	2.2	1.1	chr17	35480820	35481814	(47775627)	+	LTR13	LTR/ERVK	2	1007	(0)	1602270
1071	17.6	0.6	0.6	chr17	35515456	35515631	(47741810)	C	AluSx	SINE/Alu	(0)	312	137	1602310
2316	9.2	0.7	0.3	chr17	35515634	35515941	(47741500)	C	AluSq	SINE/Alu	(0)	313	1	1602311
19	25.7	4.0	3.9	chr17	35764050	35764148	(47493293)	+	(GGACGA)n	Simple_repeat	1	103	(0)	1602754
269	32.8	5.7	0.8	chr17	35802016	35802132	(47455309)	C	L2c	LINE/L2	(2)	3385	3263	1602837
4192	18.2	4.3	4.7	chr17	36125134	36126116	(47131325)	C	LTR28C	LTR/ERV1	(282)	1473	1	1603434
1014	19.1	3.1	0.5	chr17	36609440	36609629	(46647812)	C	MER20	DNA/hAT-Charlie	(8)	211	17	1604251
419	28.1	17.4	2.0	chr17	36609635	36609837	(46647604)	+	MIRb	SINE/MIR	28	268	(0)	1604252
222	31.2	1.3	3.8	chr17	38435054	38435133	(44822308)	C	MIR3	SINE/MIR	(25)	183	106	1607848
274	23.8	3.5	4.5	chr17	38621588	38621675	(44635766)	+	L1M6B	LINE/L1	16	102	(267)	1608202
1676	26.2	9.4	3.1	chr17	38621806	38622339	(44635102)	+	L1ME1	LINE/L1	4075	4644	(1502)	1608203
659	25.2	10.2	1.3	chr17	38675794	38676026	(44581415)	+	L2a	LINE/L2	3171	3426	(0)	1608329
18	16.8	6.4	0.0	chr17	38799428	38799474	(44457967)	+	(CGG)n	Simple_repeat	1	50	(0)	1608589
191	34.5	3.3	2.2	chr17	38868509	38868597	(44388844)	C	MIRc	SINE/MIR	(53)	215	126	1608776
982	11.7	13.8	0.0	chr17	38868620	38868782	(44388659)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	1608777
719	31.7	2.6	1.3	chr17	40086273	40086496	(43170945)	+	MIR	SINE/MIR	36	262	(0)	1611334
278	32.4	3.6	0.9	chr17	40113907	40114015	(43143426)	C	MIR3	SINE/MIR	(1)	207	96	1611369
691	26.0	5.3	0.1	chr17	40490705	40490921	(42766520)	+	MIRb	SINE/MIR	9	248	(14)	1612157
2140	12.6	3.2	1.6	chr17	40963171	40963534	(42293907)	+	THE1C	LTR/ERVL-MaLR	6	375	(0)	1612930
13	0.0	0.0	8.0	chr17	42050479	42050503	(41206938)	+	(CCGC)n	Simple_repeat	1	25	(0)	1614843
13	17.2	7.8	4.3	chr17	42050740	42050803	(41206638)	+	(CGCCCCA)n	Simple_repeat	1	69	(0)	1614844
409	13.2	4.2	0.0	chr17	42531893	42531960	(40725481)	+	MER84	LTR/ERV1	7	77	(430)	1615834
424	15.2	0.0	0.0	chr17	42531961	42532019	(40725422)	+	AluSx	SINE/Alu	25	83	(229)	1615835
17	24.2	0.0	0.0	chr17	42532066	42532109	(40725332)	+	(CAG)n	Simple_repeat	1	44	(0)	1615836
35	20.4	1.0	4.1	chr17	42532129	42532225	(40725216)	+	(CGC)n	Simple_repeat	1	98	(0)	1615837
2215	11.2	0.3	0.3	chr17	42876905	42877209	(40380232)	C	AluSz	SINE/Alu	(7)	305	1	1616527
291	27.4	1.9	7.0	chr17	42980327	42980440	(40277001)	+	L2a	LINE/L2	3314	3421	(5)	1616804
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
3068	23.0	2.7	1.5	chr17	43347911	43348633	(39908808)	C	HERVK13-int	LTR/ERVK	(7384)	732	1	1617611
7753	9.0	1.4	0.0	chr17	43348634	43349626	(39907815)	C	LTR13	LTR/ERVK	(0)	1007	1	1617611
238	29.7	18.3	0.0	chr17	43737872	43738009	(39519432)	+	L1ME4c	LINE/L1	293	461	(369)	1618512
24489	6.1	1.0	0.1	chr17	43792515	43798608	(39458833)	C	L1PA5	LINE/L1	(19)	6135	4	1618617
2275	11.8	0.0	0.0	chr17	43798633	43798929	(39458512)	C	AluSz6	SINE/Alu	(3)	309	13	1618618
12	19.6	2.9	0.0	chr17	44123383	44123417	(39134024)	+	(GGAGCGC)n	Simple_repeat	1	36	(0)	1619259
25	25.5	2.3	2.2	chr17	44123484	44123570	(39133871)	+	(GGC)n	Simple_repeat	1	89	(0)	1619260
1335	8.4	0.0	1.7	chr17	44141538	44141715	(39115726)	+	AluSg4	SINE/Alu	135	309	(1)	1619319
265	28.6	3.2	0.0	chr17	44142270	44142360	(39115081)	+	MIR3	SINE/MIR	36	129	(79)	1619320
369	33.5	2.2	2.8	chr17	44281883	44281947	(38975494)	+	MIRb	SINE/MIR	80	144	(124)	1619601
2355	9.1	0.0	0.3	chr17	44281948	44282245	(38975196)	+	AluSx1	SINE/Alu	1	297	(15)	1619602
1758	9.8	4.8	1.9	chr17	44325099	44325362	(38932079)	C	AluJb	SINE/Alu	(40)	272	1	1619697
13	18.9	0.0	0.0	chr17	44363653	44363682	(38893759)	+	(AGC)n	Simple_repeat	1	30	(0)	1619784
24	19.9	4.2	5.0	chr17	44363747	44363841	(38893600)	+	(GCTCCC)n	Simple_repeat	1	99	(0)	1619785
1624	16.8	2.7	3.7	chr17	44485117	44485413	(38772028)	C	AluJr	SINE/Alu	(18)	294	1	1620036
910	22.2	0.0	0.0	chr17	44485429	44485590	(38771851)	C	AluJb	SINE/Alu	(14)	298	137	1620037
309	30.0	12.3	0.7	chr17	44485711	44485861	(38771580)	+	L2c	LINE/L2	3166	3336	(51)	1620038
292	29.8	0.7	5.4	chr17	44603952	44604100	(38653341)	C	Charlie23a	DNA/hAT-Charlie	(147)	192	51	1620303
17	20.2	2.1	2.1	chr17	44656480	44656526	(38600915)	+	(GGC)n	Simple_repeat	1	48	(0)	1620447
23	27.5	0.0	5.2	chr17	44656776	44656871	(38600570)	+	G-rich	Low_complexity	1	96	(0)	1620448
12	15.4	8.9	2.0	chr17	44759205	44759249	(38498192)	+	(GCT)n	Simple_repeat	1	49	(0)	1620663
16	14.4	2.5	2.4	chr17	44759269	44759308	(38498133)	+	(CCCCCG)n	Simple_repeat	1	41	(0)	1620664
16	10.8	0.0	3.1	chr17	44759380	44759411	(38498030)	+	(GGGAG)n	Simple_repeat	1	32	(0)	1620665
1435	21.7	10.5	0.2	chr17	45821915	45822348	(37435093)	C	L1ME4b	LINE/L1	(9)	883	400	1622857
1767	7.2	2.5	1.7	chr17	45822623	45822859	(37434582)	+	AluSq2	SINE/Alu	55	293	(20)	1622858
233	23.7	4.8	0.0	chr17	45919091	45919149	(37338292)	+	MLT1A0	LTR/ERVL-MaLR	283	344	(21)	1623035
12	21.5	4.4	2.1	chr17	45919204	45919248	(37338193)	+	(CCCT)n	Simple_repeat	1	47	(0)	1623036
1106	25.0	8.9	8.2	chr17	46076516	46077056	(37180385)	C	L1MEf	LINE/L1	(1472)	4674	4116	1623333
1810	19.0	0.0	0.3	chr17	46077057	46077351	(37180090)	C	AluJb	SINE/Alu	(17)	295	2	1623335
6706	5.1	1.4	0.9	chr17	46534195	46535048	(36722393)	C	SVA_C	Retroposon/SVA	(0)	1384	527	1624266
213	29.0	7.4	1.0	chr17	46841784	46841884	(36415557)	+	MIR3	SINE/MIR	78	185	(23)	1624821
303	21.9	1.7	0.4	chr17	46842133	46842226	(36415215)	+	MIR1_Amn	SINE/MIR	48	150	(80)	1624822
61	0.0	0.0	0.0	chr17	46852390	46852441	(36405000)	+	(GT)n	Simple_repeat	1	52	(0)	1624849
6357	26.6	6.9	7.0	chr17	47065564	47068369	(36189072)	C	HERVIP10FH-int	LTR/ERV1	(259)	4843	2041	1625273
7903	17.6	5.0	15.6	chr17	47236522	47238904	(36018537)	C	MER52D	LTR/ERV1	(0)	2123	6	1625629
957	22.6	0.6	0.0	chr17	47299978	47300154	(35957287)	+	MER45A	DNA/hAT-Tip100	1	178	(0)	1625752
20	0.0	0.0	0.0	chr17	47300347	47300368	(35957073)	+	(GT)n	Simple_repeat	1	22	(0)	1625753
23	12.0	2.1	2.1	chr17	47650536	47650582	(35606859)	+	(CCTCCC)n	Simple_repeat	1	48	(0)	1626491
275	34.1	16.4	6.1	chr17	47831014	47831409	(35426032)	C	L2b	LINE/L2	(0)	3375	2931	1626803
850	24.4	1.9	2.8	chr17	48457530	48457744	(34799697)	C	MIR	SINE/MIR	(0)	262	50	1627886
18	19.6	0.0	0.0	chr17	48626377	48626411	(34631030)	+	(C)n	Simple_repeat	1	35	(0)	1628157
1355	9.4	0.0	2.8	chr17	48969556	48969736	(34287705)	+	AluSc8	SINE/Alu	131	306	(5)	1628947
17	4.5	0.0	4.0	chr17	49003973	49003997	(34253444)	+	(AG)n	Simple_repeat	1	25	(0)	1629014
12	28.2	1.7	3.3	chr17	49004032	49004090	(34253351)	+	(CGCCC)n	Simple_repeat	1	60	(0)	1629015
203	28.3	22.6	1.9	chr17	50050803	50050910	(33206531)	+	MIR	SINE/MIR	120	256	(6)	1631072
20	20.1	1.3	7.5	chr17	50707671	50707749	(32549692)	+	(GCCCC)n	Simple_repeat	1	80	(0)	1632279
506	27.0	5.2	9.1	chr17	50793108	50793473	(32463968)	+	MLT1J1-int	LTR/ERVL-MaLR	1050	1376	(11)	1632468
12	11.9	10.8	0.0	chr17	50867665	50867701	(32389740)	+	(CCTTCTC)n	Simple_repeat	1	41	(0)	1632612
2491	8.0	0.3	0.0	chr17	50930523	50930833	(32326608)	C	AluSx1	SINE/Alu	(0)	312	1	1632763
323	31.0	9.2	8.2	chr17	50930834	50930955	(32326486)	C	L1ME3G	LINE/L1	(362)	562	446	1632762
190	29.7	5.2	2.1	chr17	50931032	50931124	(32326317)	+	MIRb	SINE/MIR	29	124	(144)	1632764
12	13.5	2.8	5.4	chr17	50931192	50931227	(32326214)	+	(GCCC)n	Simple_repeat	1	37	(0)	1632765
5167	14.7	13.4	0.3	chr17	52035015	52035861	(31221580)	+	LTR1D	LTR/ERV1	1	975	(0)	1634804
251	22.2	0.0	11.9	chr17	52035886	52035961	(31221480)	C	MER58C	DNA/hAT-Charlie	(156)	68	2	1634805
1005	13.2	4.0	0.0	chr17	52035967	52036132	(31221309)	C	MER5A	DNA/hAT-Charlie	(1)	188	16	1634806
7152	17.4	2.4	2.1	chr17	53628816	53630746	(29626695)	+	HUERS-P3-int	LTR/ERV1	1047	3277	(5642)	1637011
988	25.6	1.4	6.3	chr17	55032859	55033091	(28224350)	+	HAL1	LINE/L1	739	958	(1549)	1638952
2276	11.2	0.0	0.0	chr17	55033092	55033376	(28224065)	+	AluSx	SINE/Alu	1	285	(27)	1638953
22889	8.9	2.5	2.5	chr17	55105778	55108871	(28148570)	C	L1PA7	LINE/L1	(3316)	3145	1	1639059
16	12.7	0.0	5.3	chr17	55265690	55265727	(27991714)	+	(CCCCG)n	Simple_repeat	1	38	(0)	1639348
258	32.4	3.9	12.1	chr17	57186640	57186888	(26070553)	+	L2b	LINE/L2	3148	3375	(0)	1642842
513	25.9	3.6	1.8	chr17	57234727	57234891	(26022550)	C	L1ME4b	LINE/L1	(21)	871	704	1642942
228	16.3	2.3	2.3	chr17	57234970	57235013	(26022428)	C	MER91B	DNA/hAT-Tip100	(122)	68	25	1642943
18	4.5	0.0	0.0	chr17	57235023	57235045	(26022396)	+	(TG)n	Simple_repeat	1	23	(0)	1642944
402	25.9	1.9	3.7	chr17	57235057	57235220	(26022221)	C	L1ME4b	LINE/L1	(170)	722	562	1642942
293	18.9	1.3	5.1	chr17	57235289	57235366	(26022075)	C	MIR	SINE/MIR	(33)	229	155	1642945
364	26.9	1.0	3.7	chr17	57560555	57560662	(25696779)	+	MIRb	SINE/MIR	64	168	(100)	1643464
883	26.0	10.1	6.3	chr17	57611515	57611977	(25645464)	+	MLT1F	LTR/ERVL-MaLR	66	548	(0)	1643540
17	0.0	0.0	0.0	chr17	57699184	57699202	(25558239)	+	(TG)n	Simple_repeat	1	19	(0)	1643667
211	23.7	0.0	8.4	chr17	57699203	57699285	(25558156)	+	L3	LINE/CR1	2036	2111	(1988)	1643663
752	28.1	5.3	3.7	chr17	57699340	57699690	(25557751)	C	L3	LINE/CR1	(2000)	2099	1743	1643668
269	31.2	12.8	0.0	chr17	58093367	58093523	(25163918)	C	MIRc	SINE/MIR	(28)	240	61	1644430
13	21.7	2.1	4.2	chr17	58324452	58324498	(24932943)	+	(CGG)n	Simple_repeat	1	48	(0)	1644822
1578	18.6	4.9	0.4	chr17	58631185	58631459	(24625982)	+	AluSz6	SINE/Alu	6	293	(19)	1645372
335	32.5	5.6	6.6	chr17	59619923	59620103	(23637338)	+	L1MDb	LINE/L1	582	760	(5649)	1647644
272	24.5	6.2	11.4	chr17	60526470	60526627	(22730814)	C	Charlie4z	DNA/hAT-Charlie	(24)	143	4	1649442
7331	13.0	2.8	5.3	chr17	60734428	60735429	(22522012)	C	L1MC2	LINE/L1	(1090)	5056	4034	1649950
1712	17.9	0.0	0.0	chr17	60735430	60735732	(22521709)	C	AluJb	SINE/Alu	(0)	312	22	1649957
15	24.8	3.0	4.3	chr17	61405691	61405757	(21851684)	+	(CGG)n	Simple_repeat	1	69	(0)	1651011
623	27.1	3.2	6.5	chr17	61473634	61473862	(21783579)	+	MIRb	SINE/MIR	40	260	(8)	1651109
13246	13.1	5.8	2.3	chr17	61544103	61546331	(21711110)	C	L1MC1	LINE/L1	(1046)	5100	2758	1651215
1513	27.0	8.6	7.3	chr17	61591398	61592127	(21665314)	C	Tigger13a	DNA/TcMar-Tigger	(29)	742	2	1651298
12	29.6	2.0	0.0	chr17	62478404	62478452	(20778989)	+	(CCGGC)n	Simple_repeat	1	50	(0)	1653079
15	40.2	0.0	0.0	chr17	62478685	62478768	(20778673)	+	(CCC)n	Simple_repeat	1	84	(0)	1653080
1468	16.6	10.2	0.3	chr17	63102815	63103098	(20154343)	+	MER2	DNA/TcMar-Tigger	26	340	(5)	1654242
9628	14.5	5.5	2.9	chr17	63288709	63290524	(19966917)	C	L1MCa	LINE/L1	(4642)	1866	1	1654531
35	23.7	0.0	1.1	chr17	63774202	63774288	(19483153)	+	(GGC)n	Simple_repeat	1	87	(0)	1655334
180	34.1	3.0	9.5	chr17	63999421	63999737	(19257704)	C	L2c	LINE/L2	(126)	3261	2966	1655727
876	15.3	0.8	0.0	chr17	64848374	64848504	(18408937)	+	FLAM_C	SINE/Alu	2	133	(10)	1657450
13	29.4	1.2	6.0	chr17	64919291	64919373	(18338068)	+	G-rich	Low_complexity	1	84	(0)	1657593
784	19.4	0.0	0.8	chr17	65086832	65086965	(18170476)	C	FLAM_C	SINE/Alu	(10)	133	1	1657934
308	23.3	11.1	1.6	chr17	65086968	65087089	(18170352)	C	LTR79	LTR/ERVL	(106)	421	287	1657935
2403	9.2	0.0	0.0	chr17	65087210	65087515	(18169926)	+	AluSc	SINE/Alu	1	306	(3)	1657936
2120	12.0	6.3	3.0	chr17	65174715	65175082	(18082359)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1658139
2013	10.9	8.1	0.0	chr17	65563189	65563472	(17693969)	+	AluSx1	SINE/Alu	1	309	(3)	1658895
240	27.9	1.1	7.5	chr17	66548459	66548551	(16708890)	C	MIRb	SINE/MIR	(21)	247	161	1660435
14	10.3	0.0	8.1	chr17	66835036	66835072	(16422369)	+	(GCCCC)n	Simple_repeat	1	37	(0)	1660889
13	18.8	0.0	0.0	chr17	66835430	66835460	(16421981)	+	(GCGTGT)n	Simple_repeat	1	31	(0)	1660890
15	12.2	0.0	0.0	chr17	66835456	66835482	(16421959)	+	(GTCT)n	Simple_repeat	1	27	(0)	1660891
355	27.3	6.8	0.9	chr17	66992781	66992891	(16264550)	+	Arthur1A	DNA/hAT-Tip100	57	174	(3)	1661200
1696	17.6	1.3	4.1	chr17	67294452	67294577	(15962864)	C	AluJb	SINE/Alu	(3)	309	191	1661721
11133	7.3	5.1	4.1	chr17	67294578	67296138	(15961303)	+	LTR12C	LTR/ERV1	3	1579	(0)	1661722
2728	3.0	0.0	0.0	chr17	67778809	67779111	(15478330)	+	AluYa5	SINE/Alu	1	303	(8)	1662765
15	19.6	0.0	0.0	chr17	67779302	67779336	(15478105)	+	G-rich	Low_complexity	1	35	(0)	1662766
2018	15.6	0.3	0.3	chr17	67779581	67779888	(15477553)	C	AluSz6	SINE/Alu	(4)	308	1	1662767
443	28.6	5.2	1.2	chr17	68020281	68020446	(15236995)	C	MER5B	DNA/hAT-Charlie	(5)	173	1	1663343
187	27.4	0.0	1.9	chr17	68020519	68020570	(15236871)	C	L2a	LINE/L2	(3)	3423	3373	1663344
675	25.6	6.9	7.4	chr17	68944815	68945164	(14312277)	+	L1MCc	LINE/L1	720	1067	(5356)	1665002
388	30.5	12.3	6.4	chr17	68945188	68945790	(14311651)	C	L1M5	LINE/L1	(767)	5475	4828	1665005
10458	7.7	0.3	0.1	chr17	71131112	71132457	(12124984)	C	L1P3	LINE/L1	(5112)	1349	1	1668317
26036	3.2	1.1	0.4	chr17	71351960	71357889	(11899552)	C	L1PA3	LINE/L1	(0)	6155	8	1668659
2189	13.3	0.0	0.3	chr17	71636989	71637282	(11620159)	C	AluJb	SINE/Alu	(18)	294	2	1669098
263	27.5	11.4	3.5	chr17	71637283	71637334	(11620107)	+	MER63B	DNA/hAT-Blackjack	373	436	(0)	1669097
479	33.8	2.4	3.8	chr17	72305387	72305595	(10951846)	C	L2a	LINE/L2	(1)	3425	3220	1670152
14	17.8	3.5	6.7	chr17	72305783	72305840	(10951601)	+	A-rich	Low_complexity	1	60	(0)	1670153
224	31.8	10.1	0.9	chr17	72311795	72311902	(10945539)	C	MIRb	SINE/MIR	(26)	242	124	1670161
167	40.6	1.3	1.5	chr17	72553346	72554392	(10703049)	+	(CA)n	Simple_repeat	1	1061	(0)	1670593
1231	14.0	1.0	3.4	chr17	74077898	74078104	(9179337)	+	THE1C	LTR/ERVL-MaLR	1	202	(173)	1673460
277	8.3	0.0	0.0	chr17	74078096	74078131	(9179310)	+	THE1C	LTR/ERVL-MaLR	317	352	(3)	1673460
403	28.9	17.9	1.5	chr17	74078148	74078407	(9179034)	C	LTR33	LTR/ERVL	(59)	456	145	1673461
348	30.1	5.8	7.9	chr17	74437712	74437888	(8819553)	C	Tigger16a	DNA/TcMar-Tigger	(665)	292	120	1674162
1816	15.1	0.7	4.5	chr17	74438016	74438206	(8819235)	C	AluJb	SINE/Alu	(0)	312	139	1674163
2336	12.0	0.0	0.3	chr17	74534048	74534356	(8723085)	C	AluSx1	SINE/Alu	(4)	308	1	1674328
3317	16.4	2.9	7.5	chr17	74534357	74534683	(8722758)	+	HUERS-P3-int	LTR/ERV1	1205	1530	(7389)	1674326
313	19.3	0.0	1.8	chr17	74534684	74534740	(8722701)	+	AluYj4	SINE/Alu	232	287	(24)	1674329
1382	29.1	14.4	2.5	chr17	74534741	74535186	(8722255)	+	L1ME3E	LINE/L1	3848	4380	(1766)	1674330
865	32.6	7.5	4.5	chr17	74595731	74596036	(8661405)	C	HERV16-int	LTR/ERVL	(3302)	2412	2021	1674430
12	29.0	2.8	4.0	chr17	74843280	74843351	(8414090)	+	G-rich	Low_complexity	1	74	(0)	1674857
18	31.8	1.7	5.0	chr17	75047210	75047279	(8210162)	+	(CGG)n	Simple_repeat	1	116	(0)	1675237
13	14.3	2.3	6.7	chr17	75047280	75047323	(8210118)	+	(GGCGG)n	Simple_repeat	1	45	(0)	1675238
667	15.5	0.0	0.0	chr17	75079546	75079642	(8177799)	+	AluJb	SINE/Alu	1	97	(215)	1675304
828	3.2	0.0	0.0	chr17	75079674	75079766	(8177675)	C	AluSg7	SINE/Alu	(216)	93	1	1675305
237	26.9	17.0	0.0	chr17	75131946	75132101	(8125340)	+	Charlie2a	DNA/hAT-Charlie	182	369	(2492)	1675414
12	28.9	2.0	0.0	chr17	75502423	75502472	(7754969)	+	G-rich	Low_complexity	1	51	(0)	1676268
1153	12.4	2.4	0.0	chr17	75729867	75730027	(7527414)	+	AluJo	SINE/Alu	6	170	(142)	1676661
20	3.7	0.0	0.0	chr17	76121563	76121598	(7135843)	+	(CCGGG)n	Simple_repeat	1	36	(0)	1677426
13	15.2	2.5	4.9	chr17	76121990	76122029	(7135412)	+	G-rich	Low_complexity	1	41	(0)	1677427
599	29.4	3.2	2.7	chr17	76579520	76579548	(6677893)	+	MIR	SINE/MIR	3	29	(233)	1678314
2126	18.2	2.8	1.8	chr17	76579549	76579940	(6677501)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1678315
1160	23.6	15.2	3.3	chr17	76674610	76675127	(6582314)	+	MLT1L	LTR/ERVL-MaLR	20	610	(0)	1678527
2308	10.4	0.0	0.0	chr17	76988593	76988891	(6268550)	+	AluSq2	SINE/Alu	1	299	(14)	1679175
195	33.3	2.0	5.0	chr17	77066685	77066785	(6190656)	+	MIRb	SINE/MIR	50	147	(121)	1679362
2480	4.7	4.8	0.0	chr17	77067017	77067356	(6190085)	+	MER4E1	LTR/ERV1	1	357	(424)	1679363
10317	23.9	4.5	3.5	chr17	77174219	77174737	(6082704)	C	HERVIP10B3-int	LTR/ERV1	(7081)	522	1	1679599
1609	17.9	20.3	7.8	chr17	77174738	77175209	(6082232)	C	LTR10B1	LTR/ERV1	(0)	547	2	1679599
258	28.1	9.7	0.0	chr17	77247558	77247678	(6009763)	C	MIR	SINE/MIR	(92)	170	37	1679714
582	28.4	6.4	3.9	chr17	77247675	77247934	(6009507)	+	L2b	LINE/L2	3035	3301	(74)	1679715
523	28.2	13.1	2.3	chr17	77393065	77393329	(5864112)	C	LTR16C	LTR/ERVL	(5)	484	187	1679982
652	31.7	4.2	0.0	chr17	77424092	77424321	(5833120)	C	MIRb	SINE/MIR	(0)	268	29	1680025
247	21.2	9.6	12.6	chr17	77534761	77534879	(5722562)	C	MER5A	DNA/hAT-Charlie	(24)	165	51	1680196
3600	14.6	6.4	0.3	chr17	77747831	77748443	(5508998)	+	MER39B	LTR/ERV1	1	653	(0)	1680575
1940	14.0	4.3	1.0	chr17	77748846	77749137	(5508304)	+	AluSz	SINE/Alu	11	312	(0)	1680576
254	34.8	6.9	3.8	chr17	77822899	77823137	(5434304)	+	MIRc	SINE/MIR	20	266	(2)	1680702
11	19.1	2.1	6.2	chr17	77899936	77899982	(5357459)	+	(CCCCAG)n	Simple_repeat	1	48	(0)	1680841
2428	8.5	0.0	0.3	chr17	77900326	77900630	(5356811)	C	AluY	SINE/Alu	(6)	305	2	1680842
13	0.0	3.7	7.1	chr17	77958894	77958920	(5298521)	+	(GAGCG)n	Simple_repeat	1	28	(0)	1680964
197	33.3	7.5	1.8	chr17	78978397	78978509	(4278932)	C	MIRb	SINE/MIR	(82)	186	67	1682796
477	19.6	1.8	1.8	chr17	78978579	78978687	(4278754)	+	MER81	DNA/hAT-Blackjack	5	113	(1)	1682797
2046	9.6	3.8	3.8	chr17	78978782	78979073	(4278368)	+	AluSz	SINE/Alu	1	292	(20)	1682798
15	25.4	4.0	3.9	chr17	79508375	79508449	(3748992)	+	(CCGC)n	Simple_repeat	1	78	(0)	1683516
2227	12.9	4.7	0.3	chr17	80084139	80084502	(3172939)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1684439
1927	10.0	1.5	0.4	chr17	80261737	80261996	(2995445)	+	AluSx	SINE/Alu	1	263	(49)	1684775
238	31.2	2.5	0.0	chr17	80477779	80477855	(2779586)	C	MIR3	SINE/MIR	(19)	189	111	1685067
488	27.4	3.1	0.0	chr17	80600896	80601019	(2656422)	+	MLT1G3	LTR/ERVL-MaLR	18	145	(434)	1685293
604	29.2	5.0	0.5	chr17	80601154	80601363	(2656078)	+	MLT1G3	LTR/ERVL-MaLR	343	562	(33)	1685293
6844	4.3	0.1	3.7	chr17	80601562	80602473	(2654968)	C	SVA_F	Retroposon/SVA	(0)	1375	497	1685294
288	24.4	7.2	4.3	chr17	80650508	80650601	(2606840)	+	MIRc	SINE/MIR	12	108	(160)	1685366
31	20.1	0.0	0.0	chr17	80991986	80992053	(2265388)	+	G-rich	Low_complexity	1	68	(0)	1685754
12	20.2	2.9	0.0	chr17	81034527	81034560	(2222881)	+	(GGCC)n	Simple_repeat	1	35	(0)	1685811
14	22.8	5.2	1.6	chr17	81314318	81314375	(1943066)	+	(CCCTC)n	Simple_repeat	1	61	(0)	1686107
13	13.2	6.1	0.0	chr17	81592087	81592119	(1665322)	+	(GAGGCA)n	Simple_repeat	1	35	(0)	1686441
13	24.8	4.2	0.0	chr17	81636936	81636983	(1620458)	+	(CTGCCTC)n	Simple_repeat	1	50	(0)	1686548
1813	15.9	0.7	2.1	chr17	81718064	81718201	(1539240)	+	AluJb	SINE/Alu	1	137	(175)	1686680
15	25.9	2.1	0.0	chr17	81733773	81733819	(1523622)	+	(TGAA)n	Simple_repeat	1	48	(0)	1686720
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
16	23.6	0.0	0.0	chr17	82450409	82450443	(806998)	+	(CA)n	Simple_repeat	1	35	(0)	1687654
1604	23.8	10.8	1.2	chr17	82450996	82451574	(805867)	+	L1MC5	LINE/L1	8131	8771	(533)	1687655
779	8.1	11.5	0.0	chr17	82950988	82951110	(306331)	C	MER85	DNA/PiggyBac	(0)	139	1	1688421
4064	14.9	7.7	0.5	chr17	82951127	82951886	(305555)	C	Tigger1	DNA/TcMar-Tigger	(1330)	1088	270	1688420
13	12.9	9.1	2.1	chr17	83051163	83051206	(206235)	+	G-rich	Low_complexity	1	48	(0)	1688527
607	22.6	6.9	3.5	chr17	83120138	83120334	(137107)	+	L1MB7	LINE/L1	5981	6184	(0)	1688583
1381	16.1	6.7	0.0	chr17	83194626	83194934	(62507)	C	MER1B	DNA/hAT-Charlie	(0)	339	7	1688656
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
439	23.8	3.8	3.8	chr18	2882030	2882160	(77491125)	+	MIRb	SINE/MIR	27	157	(111)	1693420
1655	14.2	17.5	6.9	chr18	3286131	3286509	(77086776)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1694096
278	30.6	5.6	2.2	chr18	3286736	3286872	(77086413)	C	L2	LINE/L2	(833)	2586	2445	1694097
23961	11.4	2.3	2.4	chr18	3695244	3700586	(76672699)	C	L1PA7	LINE/L1	(1034)	5427	1	1694907
2080	13.9	0.3	1.6	chr18	3821011	3821313	(76551972)	+	AluJo	SINE/Alu	9	307	(5)	1695106
419	30.2	9.5	5.5	chr18	3821314	3821377	(76551908)	C	MIRb	SINE/MIR	(160)	108	36	1695105
196	35.8	0.9	0.9	chr18	6751494	6751603	(73621682)	+	L3b	LINE/CR1	4767	4876	(356)	1699007
2423	5.7	0.3	1.0	chr18	7427011	7427311	(72945974)	C	AluY	SINE/Alu	(7)	304	6	1700077
33	2.9	0.0	0.0	chr18	7567432	7567466	(72805819)	+	(CGGCCA)n	Simple_repeat	1	35	(0)	1700299
998	13.0	6.5	3.4	chr18	8591622	8591828	(71781457)	+	L1MA8	LINE/L1	6072	6285	(6)	1701622
14856	12.9	2.8	3.5	chr18	8591829	8593078	(71780207)	+	L1MC1	LINE/L1	3958	5176	(970)	1701620
2844	15.6	3.6	3.5	chr18	8645835	8646395	(71726890)	+	L1MB3	LINE/L1	5447	6004	(352)	1701708
13594	10.4	1.7	1.1	chr18	8646428	8648924	(71724361)	+	L1P3	LINE/L1	1	2521	(3978)	1701713
2498	6.5	0.0	0.0	chr18	10329772	10330065	(70043220)	+	AluSc	SINE/Alu	1	294	(15)	1704416
1366	16.4	3.1	0.0	chr18	10854704	10854922	(69518363)	C	AluJb	SINE/Alu	(2)	310	85	1705052
16	0.0	0.0	0.0	chr18	13219070	13219087	(67154198)	+	(T)n	Simple_repeat	1	18	(0)	1708815
611	29.0	13.5	2.6	chr18	13391618	13392116	(66981169)	C	L1ME4a	LINE/L1	(3)	6121	5560	1709025
18	9.8	3.0	0.0	chr18	15001612	15001644	(65371641)	+	(CCTGC)n	Simple_repeat	1	34	(0)	1711099
8749	21.8	8.7	3.6	chr18	21012251	21013781	(59359504)	C	L1MD2	LINE/L1	(4581)	2052	409	1711772
15	21.2	0.0	4.3	chr18	21111889	21111935	(59261350)	+	G-rich	Low_complexity	1	47	(0)	1711924
17	18.7	2.5	8.6	chr18	21704672	21704750	(58668535)	+	G-rich	Low_complexity	1	81	(0)	1713147
13	17.7	2.5	2.4	chr18	22176846	22176885	(58196400)	+	G-rich	Low_complexity	1	41	(0)	1714094
13	15.9	8.6	5.3	chr18	22177132	22177201	(58196084)	+	(CCGGCC)n	Simple_repeat	1	76	(0)	1714095
289	25.6	11.8	6.2	chr18	22177420	22177611	(58195674)	+	L1ME4b	LINE/L1	626	829	(63)	1714096
25	19.6	0.0	0.0	chr18	22276787	22276833	(58096452)	+	(T)n	Simple_repeat	1	47	(0)	1714279
191	27.9	0.0	0.0	chr18	22286609	22286651	(58086634)	+	MamSINE1	SINE/tRNA-RTE	242	284	(6)	1714301
20	20.5	3.6	0.0	chr18	23503782	23503837	(56869448)	+	(CCCGT)n	Simple_repeat	1	58	(0)	1716344
816	31.1	14.9	4.8	chr18	23755650	23756297	(56616988)	C	L4_A_Mam	LINE/RTE-X	(193)	4797	4073	1716817
15	12.9	2.8	2.7	chr18	23756470	23756505	(56616780)	+	A-rich	Low_complexity	1	37	(0)	1716818
309	26.3	8.1	0.0	chr18	23756531	23756644	(56616641)	+	MIRb	SINE/MIR	29	152	(116)	1716819
13	24.3	5.7	0.0	chr18	23884900	23884952	(56488333)	+	G-rich	Low_complexity	1	56	(0)	1717002
2060	17.6	6.0	1.8	chr18	24105753	24106197	(56267088)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	3	1717361
13	9.3	0.0	0.0	chr18	24426263	24426285	(55947000)	+	(AAAC)n	Simple_repeat	1	23	(0)	1717928
13	20.6	4.9	4.7	chr18	24426651	24426711	(55946574)	+	(CCGCG)n	Simple_repeat	1	64	(0)	1717929
237	31.2	11.8	0.0	chr18	24427051	24427162	(55946123)	+	MIRc	SINE/MIR	26	152	(116)	1717930
25382	6.4	1.5	0.1	chr18	24901158	24907226	(55466059)	+	L1PA5	LINE/L1	4	6147	(7)	1718659
491	22.4	11.2	2.0	chr18	26089740	26089885	(54283400)	+	L2c	LINE/L2	3227	3387	(0)	1720303
12	15.2	2.4	7.0	chr18	26090392	26090433	(54282852)	+	(GGCCC)n	Simple_repeat	1	43	(0)	1720304
398	35.5	12.9	0.9	chr18	26439730	26440062	(53933223)	+	L3	LINE/CR1	3028	3406	(693)	1720914
218	19.1	0.0	0.0	chr18	26440094	26440135	(53933150)	+	L3	LINE/CR1	3504	3545	(554)	1720914
259	27.4	10.2	4.1	chr18	26440323	26440490	(53932795)	C	MIRc	SINE/MIR	(49)	219	33	1720921
1828	17.6	0.8	0.6	chr18	26883561	26883915	(53489370)	+	L1M2	LINE/L1	4531	4886	(1257)	1721647
2006	16.6	9.4	1.2	chr18	26883971	26884530	(53488755)	+	SATR1	Satellite	1	933	(3753)	1721648
24	22.9	2.7	1.3	chr18	28176821	28176893	(52196392)	+	(GCGGC)n	Simple_repeat	1	75	(0)	1723415
15	17.1	2.4	2.4	chr18	28176906	28176946	(52196339)	+	(CCCCG)n	Simple_repeat	1	42	(0)	1723416
15	14.7	6.2	2.0	chr18	28177023	28177057	(52196228)	+	GA-rich	Low_complexity	1	37	(0)	1723417
28	0.0	0.0	0.0	chr18	28177058	28177083	(52196202)	+	(GGC)n	Simple_repeat	1	26	(0)	1723418
15	14.7	6.2	2.0	chr18	28177084	28177095	(52196190)	+	GA-rich	Low_complexity	38	49	(0)	1723419
12	30.1	0.0	3.5	chr18	28177146	28177202	(52196083)	+	(CCCCGCT)n	Simple_repeat	1	57	(0)	1723420
27578	2.5	0.1	0.3	chr18	30021863	30027457	(50345828)	C	L1PA2	LINE/L1	(13)	6142	550	1725776
2424	26.9	5.6	2.9	chr18	30657886	30658568	(49714717)	+	L1PA11	LINE/L1	1	702	(6279)	1726653
1287	18.9	7.4	7.5	chr18	30658573	30659045	(49714240)	C	MER51A	LTR/ERV1	(0)	634	1	1726654
21084	14.5	3.1	1.0	chr18	30659061	30661896	(49711389)	+	L1PA11	LINE/L1	1751	4658	(2923)	1726653
2508	14.6	2.3	2.3	chr18	30766844	30767278	(49606007)	C	MER50	LTR/ERV1	(299)	435	1	1726778
13	22.6	0.0	4.4	chr18	31042994	31043038	(49330247)	+	(CCCCG)n	Simple_repeat	1	45	(0)	1727133
16	25.7	1.8	1.7	chr18	31102451	31102507	(49270778)	+	(CGGCCC)n	Simple_repeat	1	58	(0)	1727208
27812	2.3	0.1	0.0	chr18	31347969	31353996	(49019289)	C	L1PA2	LINE/L1	(1)	6154	125	1727576
26	24.3	0.7	8.7	chr18	31498127	31498195	(48875090)	+	G-rich	Low_complexity	1	105	(33)	1727744
17	9.6	8.3	3.9	chr18	31498196	31498243	(48875042)	+	(CGG)n	Simple_repeat	1	52	(0)	1727745
26	24.3	0.7	8.7	chr18	31498244	31498263	(48875022)	+	G-rich	Low_complexity	106	138	(0)	1727744
9048	19.6	5.0	4.3	chr18	31741642	31742824	(48630461)	C	HUERS-P3b-int	LTR/ERV1	(5478)	1940	759	1728138
17	15.5	2.8	0.0	chr18	32470786	32470821	(47902464)	+	(CCT)n	Simple_repeat	1	37	(0)	1729400
22	20.9	1.8	0.0	chr18	32470926	32470980	(47902305)	+	(CCGCCT)n	Simple_repeat	1	56	(0)	1729401
12983	16.8	2.5	2.5	chr18	33535692	33538152	(46835133)	+	L1PA17	LINE/L1	4355	6849	(20)	1730859
25	8.6	0.0	2.6	chr18	34493213	34493251	(45880034)	+	(TG)n	Simple_repeat	1	39	(0)	1732026
13	15.8	2.7	2.6	chr18	34493261	34493297	(45879988)	+	GA-rich	Low_complexity	1	38	(0)	1732027
27395	2.4	0.3	0.1	chr18	34552379	34558395	(45814890)	C	L1PA2	LINE/L1	(1)	6154	124	1732105
27077	3.8	0.1	0.1	chr18	34894775	34900928	(45472357)	+	L1PA3	LINE/L1	3	6155	(0)	1732567
28	3.3	0.0	0.0	chr18	34976872	34976902	(45396383)	+	(CACCCG)n	Simple_repeat	1	31	(0)	1732683
18	24.1	0.0	6.1	chr18	34976948	34977013	(45396272)	+	(GCG)n	Simple_repeat	1	66	(0)	1732684
2244	9.9	1.0	1.3	chr18	35302037	35302339	(45070946)	+	AluSc8	SINE/Alu	1	302	(9)	1733130
1281	20.0	15.4	3.5	chr18	35302340	35302644	(45070641)	+	LTR40b	LTR/ERVL	100	462	(0)	1733129
2128	21.0	5.2	6.8	chr18	35302659	35303220	(45070065)	+	HERVL40-int	LTR/ERVL	18	570	(4960)	1733129
474	31.1	1.9	1.2	chr18	35408271	35408467	(44964818)	+	MIR	SINE/MIR	5	205	(63)	1733275
27820	3.5	1.0	0.2	chr18	35760309	35766412	(44606873)	+	L1PA3	LINE/L1	1	6155	(0)	1733781
725	22.8	15.8	5.8	chr18	35872518	35872829	(44500456)	+	LTR19C	LTR/ERV1	1	349	(430)	1733915
32122	17.7	0.5	0.7	chr18	35872830	35876411	(44496874)	+	HUERS-P3-int	LTR/ERV1	1440	5025	(3894)	1733916
3016	19.2	6.5	1.2	chr18	35971355	35972182	(44401103)	+	L1MB5	LINE/L1	5258	6174	(0)	1734073
13	8.6	0.0	6.9	chr18	35972700	35972728	(44400557)	+	(GCG)n	Simple_repeat	1	29	(0)	1734074
5118	9.5	0.6	0.3	chr18	36100520	36101186	(44272099)	C	L1PA10	LINE/L1	(0)	6168	5500	1734306
1593	19.3	5.0	1.0	chr18	36101187	36101490	(44271795)	C	L1P3	LINE/L1	(6135)	326	10	1734307
379	24.4	0.0	2.4	chr18	36101606	36101689	(44271596)	C	LTR27E	LTR/ERV1	(538)	539	458	1734308
18	14.9	0.0	0.0	chr18	36298760	36298789	(44074496)	+	(T)n	Simple_repeat	1	30	(0)	1734615
2173	18.4	16.1	1.3	chr18	36611243	36611794	(43761491)	C	MLT1E1	LTR/ERVL-MaLR	(4)	650	1	1735002
1668	27.5	18.0	4.6	chr18	36715565	36716908	(43656377)	C	L2a	LINE/L2	(53)	3373	1779	1735124
14746	6.7	0.4	0.0	chr18	37100068	37101944	(43271341)	+	L1P1	LINE/L1	34	1917	(4238)	1735610
36	9.8	0.0	0.0	chr18	37247621	37247676	(43125609)	+	(ACAC)n	Simple_repeat	1	56	(0)	1735803
193	38.1	4.0	0.0	chr18	37301317	37301413	(43071872)	+	L2b	LINE/L2	3226	3326	(49)	1735869
346	24.9	9.8	4.8	chr18	37342607	37342810	(43030475)	+	MIRc	SINE/MIR	6	215	(15)	1735916
5154	10.8	3.1	1.6	chr18	37671014	37671800	(42701485)	+	LTR1A1	LTR/ERV1	1	799	(0)	1736364
10563	13.1	1.9	1.3	chr18	38392275	38394133	(41979152)	+	L1P3	LINE/L1	6	1861	(4622)	1737328
183	23.6	10.9	12.4	chr18	38494648	38494768	(41878517)	C	MIRb	SINE/MIR	(121)	147	29	1737454
73	0.0	2.8	0.0	chr18	39686978	39687049	(40686236)	+	(TTTTA)n	Simple_repeat	1	74	(0)	1739052
1755	20.2	0.0	0.0	chr18	39687050	39687331	(40685954)	C	AluJb	SINE/Alu	(30)	282	1	1739053
7712	11.5	1.7	1.4	chr18	46043423	46045664	(34327621)	+	L1PA3	LINE/L1	3898	6145	(10)	1747867
31	0.0	0.0	2.9	chr18	46045665	46045698	(34327587)	+	(AATA)n	Simple_repeat	1	34	(0)	1747868
315	20.6	1.2	8.4	chr18	46045699	46045791	(34327494)	+	L1MC4a	LINE/L1	4661	4744	(1402)	1747869
870	18.5	2.5	3.7	chr18	46045797	46045958	(34327327)	+	AluJb	SINE/Alu	138	297	(15)	1747870
823	25.4	1.5	0.0	chr18	46045961	46046153	(34327132)	+	L1MC4a	LINE/L1	4737	4932	(1214)	1747869
2345	9.5	0.3	0.7	chr18	46461363	46461667	(33911618)	+	AluSq2	SINE/Alu	1	304	(9)	1748697
548	25.9	4.5	2.5	chr18	47176501	47176574	(33196711)	+	Charlie5	DNA/hAT-Charlie	2378	2451	(173)	1749803
11	21.6	0.0	4.9	chr18	47251755	47251795	(33121490)	+	(GAGCGA)n	Simple_repeat	1	41	(0)	1749908
295	32.3	6.2	1.8	chr18	48639658	48639827	(31733458)	C	MLT1J	LTR/ERVL-MaLR	(45)	467	290	1752242
6117	12.6	3.0	1.0	chr18	49447550	49449852	(30923433)	+	HUERS-P3b-int	LTR/ERV1	273	2507	(4911)	1753551
20	7.2	0.0	0.0	chr18	49470180	49470209	(30903076)	+	(TCC)n	Simple_repeat	1	30	(0)	1753588
501	26.0	10.1	5.1	chr18	49759416	49759630	(30613655)	C	MER103C	DNA/hAT-Charlie	(0)	297	71	1754165
61	0.0	0.0	0.0	chr18	49759884	49759935	(30613350)	+	(GT)n	Simple_repeat	1	52	(0)	1754166
17788	7.8	0.8	0.2	chr18	50500001	50503218	(29870067)	C	L1P2	LINE/L1	(3090)	3056	5	1755235
5774	16.7	8.2	3.7	chr18	50503233	50504578	(29868707)	C	L1M4	LINE/L1	(1808)	4338	2928	1755236
5595	4.5	1.6	0.3	chr18	50608723	50609418	(29763867)	C	SVA_B	Retroposon/SVA	(1)	1382	678	1755417
314	27.5	4.8	5.5	chr18	50609441	50609567	(29763718)	C	MIRb	SINE/MIR	(130)	138	13	1755418
12	28.9	0.0	0.0	chr18	50752079	50752120	(29621165)	+	G-rich	Low_complexity	1	42	(0)	1755679
33	0.0	0.0	0.0	chr18	50752384	50752411	(29620874)	+	(AT)n	Simple_repeat	1	28	(0)	1755680
313	30.9	8.1	0.0	chr18	51122894	51123029	(29250256)	+	MIR	SINE/MIR	115	262	(0)	1756382
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
16	0.0	0.0	0.0	chr18	57442245	57442262	(22931023)	+	(T)n	Simple_repeat	1	18	(0)	1765556
390	25.2	1.8	13.3	chr18	57629675	57629802	(22743483)	+	MLT1H2	LTR/ERVL-MaLR	432	625	(2)	1765868
1199	12.6	0.0	1.6	chr18	57629852	57630033	(22743252)	+	AluJr	SINE/Alu	1	179	(133)	1765872
2319	10.9	6.6	0.0	chr18	58554761	58555100	(21818185)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1767423
1738	18.6	5.0	3.5	chr18	58814094	58814316	(21558969)	+	L1MB3	LINE/L1	5453	5669	(514)	1767916
2987	19.3	5.3	0.2	chr18	59560688	59561201	(20812084)	+	HERVL18-int	LTR/ERVL	2947	3488	(2559)	1769128
7702	16.8	2.4	2.9	chr18	60011281	60011382	(20361903)	C	L1MA7	LINE/L1	(2511)	5371	5266	1769933
1757	19.2	3.3	2.1	chr18	60313626	60314215	(20059070)	C	L1M3	LINE/L1	(499)	5813	5139	1770371
9078	13.2	2.1	1.1	chr18	60783906	60785317	(19587968)	+	THE1D-int	LTR/ERVL-MaLR	205	1631	(0)	1770982
2020	14.6	3.1	1.6	chr18	60785318	60785692	(19587593)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1770982
11260	14.5	2.3	1.6	chr18	64813326	64816172	(15557113)	+	HUERS-P3-int	LTR/ERV1	4	4916	(301)	1776931
16128	4.0	0.2	0.1	chr18	67603634	67605600	(12767685)	+	L1HS	LINE/L1	2	1972	(4060)	1780677
12	19.9	9.6	0.0	chr18	69400657	69400708	(10972577)	+	G-rich	Low_complexity	1	57	(0)	1783142
11582	9.9	1.2	1.7	chr18	70236426	70240144	(10133141)	+	L1P3	LINE/L1	8	3742	(2719)	1784254
849	31.5	11.9	1.3	chr18	70406356	70406769	(9966516)	C	MLT1J	LTR/ERVL-MaLR	(8)	504	43	1784565
1333	17.9	0.7	0.4	chr18	70406770	70407038	(9966247)	C	L1MA7	LINE/L1	(5)	6286	6017	1784566
353	28.0	4.5	4.2	chr18	75472396	75472539	(4900746)	C	MIR3	SINE/MIR	(80)	188	39	1791045
1706	18.1	2.0	1.0	chr18	76006822	76007120	(4366165)	+	AluJo	SINE/Alu	1	302	(10)	1791660
14	13.0	5.9	0.0	chr18	76007295	76007328	(4365957)	+	A-rich	Low_complexity	1	36	(0)	1791661
332	26.8	4.3	2.6	chr18	76276049	76276163	(4097122)	C	MER91C	DNA/hAT-Tip100	(3)	137	21	1791991
787	31.3	4.1	0.0	chr18	76339288	76339520	(4033765)	C	MIR	SINE/MIR	(0)	262	20	1792050
382	29.9	12.3	5.4	chr18	76658973	76659242	(3714043)	+	HAL1ME	LINE/L1	862	1157	(1308)	1792426
181	19.7	17.4	7.3	chr18	77141223	77141304	(3231981)	C	L3	LINE/CR1	(1593)	2506	2415	1793115
2018	13.3	1.0	2.6	chr18	77141618	77141926	(3231359)	+	AluSx1	SINE/Alu	1	304	(8)	1793116
14	21.8	0.0	4.3	chr18	78180583	78180628	(2192657)	+	A-rich	Low_complexity	1	46	(0)	1794336
10184	6.7	1.0	10.9	chr18	79072149	79073684	(1299601)	C	SVA_B	Retroposon/SVA	(0)	1383	2	1795145
12796	9.9	1.2	0.5	chr18	79081663	79083859	(1289426)	C	L1PA7	LINE/L1	(4261)	2238	13	1795152
2304	11.5	1.3	0.0	chr18	79083860	79084155	(1289130)	C	AluSc	SINE/Alu	(8)	301	2	1795154
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
339	34.9	8.7	2.1	chr18	79573616	79573852	(799433)	+	HAL1	LINE/L1	2248	2501	(6)	1795579
239	15.2	4.8	0.0	chr18	79727093	79727151	(646134)	C	L1MD1	LINE/L1	(5905)	728	667	1795722
12	16.3	7.0	2.2	chr18	79988584	79988626	(384659)	+	(CGTG)n	Simple_repeat	1	46	(0)	1795993
2366	7.3	2.3	0.0	chr19	267692	267992	(58349624)	+	AluSp	SINE/Alu	3	310	(3)	1796659
219	22.2	1.8	6.9	chr19	519916	519973	(58097643)	+	MIR3	SINE/MIR	109	163	(45)	1797071
231	34.0	3.4	4.6	chr19	544354	544504	(58073112)	C	MIRb	SINE/MIR	(80)	188	40	1797108
126	29.1	3.2	0.6	chr19	544642	544706	(58072910)	+	(ATCC)n	Simple_repeat	1	67	(0)	1797109
1646	6.4	14.7	0.4	chr19	559904	560137	(58057479)	C	AluSg	SINE/Alu	(0)	310	38	1797151
379	20.4	2.1	0.0	chr19	560172	560264	(58057352)	C	LTR10B2	LTR/ERV1	(0)	503	409	1797152
314	22.9	3.2	2.1	chr19	560296	560419	(58057197)	C	LTR10B2	LTR/ERV1	(217)	416	205	1797152
2394	9.7	0.2	8.2	chr19	560496	560534	(58057082)	C	HERVIP10B3-int	LTR/ERV1	(0)	7603	7572	1797153
311	26.0	0.9	8.9	chr19	602099	602470	(58015146)	+	TAR1	Satellite/telo	1093	1434	(677)	1797209
13	15.4	0.0	11.1	chr19	644592	644645	(57972971)	+	G-rich	Low_complexity	1	54	(0)	1797289
2431	7.0	0.0	1.3	chr19	771058	771372	(57846244)	+	AluY	SINE/Alu	1	311	(0)	1797566
317	29.8	5.3	0.9	chr19	771406	771622	(57845994)	+	L2	LINE/L2	2783	3009	(410)	1797567
202	26.1	0.0	0.0	chr19	827975	828020	(57789596)	C	MIR	SINE/MIR	(140)	122	77	1797688
2052	6.8	3.9	8.4	chr19	860182	860503	(57757113)	C	AluSx1	SINE/Alu	(3)	309	3	1797778
2313	10.0	0.0	1.3	chr19	863629	863937	(57753679)	+	AluSx1	SINE/Alu	7	311	(1)	1797783
17	0.0	0.0	0.0	chr19	864043	864061	(57753555)	+	(CA)n	Simple_repeat	1	19	(0)	1797784
347	31.9	10.3	3.5	chr19	864139	864336	(57753280)	C	MIRb	SINE/MIR	(21)	247	35	1797785
13	14.3	3.0	2.9	chr19	1020920	1020952	(57596664)	+	(CCG)n	Simple_repeat	1	34	(0)	1798079
18	20.6	2.9	5.6	chr19	1021040	1021108	(57596508)	+	(CGC)n	Simple_repeat	1	71	(0)	1798080
212	37.1	1.9	0.0	chr19	1387397	1387501	(57230115)	C	L2b	LINE/L2	(244)	3131	3025	1798713
2343	8.8	0.7	0.0	chr19	1578915	1579209	(57038407)	+	AluSx1	SINE/Alu	14	310	(2)	1799060
2475	7.1	0.7	0.0	chr19	1803616	1803923	(56813693)	+	AluSq	SINE/Alu	1	310	(3)	1799551
2508	8.1	0.7	0.0	chr19	1809201	1809510	(56808106)	+	AluSx	SINE/Alu	1	312	(0)	1799562
20	3.7	0.0	0.0	chr19	2042873	2042900	(56574716)	+	(GGGCA)n	Simple_repeat	1	28	(0)	1800024
12	5.5	0.0	0.0	chr19	2343973	2343991	(56273625)	+	(GCT)n	Simple_repeat	1	19	(0)	1800585
547	24.9	2.8	6.8	chr19	2579780	2579969	(56037647)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	286	1801151
969	15.3	0.0	0.7	chr19	2587726	2587869	(56029747)	+	AluSx3	SINE/Alu	167	309	(2)	1801168
35	6.8	2.9	5.6	chr19	2587870	2587953	(56029663)	+	GA-rich	Low_complexity	1	81	(0)	1801169
779	21.6	1.7	2.3	chr19	2587954	2588128	(56029488)	+	L1ME3G	LINE/L1	4068	4241	(1905)	1801170
2384	7.7	0.0	0.0	chr19	2599655	2599951	(56017665)	+	AluSx	SINE/Alu	1	297	(15)	1801198
341	35.1	6.3	0.5	chr19	2802769	2802991	(55814625)	C	L1MC4	LINE/L1	(917)	7125	6889	1801691
12	19.7	6.2	2.0	chr19	2820169	2820216	(55797400)	+	G-rich	Low_complexity	1	51	(0)	1801709
8469	4.5	0.9	0.3	chr19	2871676	2872676	(55744940)	C	LTR13	LTR/ERVK	(0)	1007	1	1801822
2291	11.0	0.7	0.0	chr19	3145547	3145847	(55471769)	C	AluSx1	SINE/Alu	(9)	303	1	1802505
301	30.6	10.1	2.4	chr19	3146295	3146421	(55471195)	C	MIR	SINE/MIR	(112)	150	13	1802506
340	20.2	2.2	2.2	chr19	3151846	3151936	(55465680)	C	L2b	LINE/L2	(198)	3177	3087	1802518
14	12.4	2.6	5.0	chr19	3203857	3203895	(55413721)	+	G-rich	Low_complexity	1	40	(0)	1802628
2392	8.7	0.0	0.3	chr19	3355202	3355501	(55262115)	C	AluYm1	SINE/Alu	(12)	299	1	1803037
586	30.9	8.6	2.0	chr19	3355502	3355540	(55262076)	C	L1M5	LINE/L1	(915)	5328	5289	1803036
430	19.0	0.4	5.4	chr19	3355549	3355659	(55261957)	C	FLAM_C	SINE/Alu	(0)	133	26	1803038
468	17.4	6.8	6.8	chr19	3355776	3355923	(55261693)	+	MER106B	DNA/hAT-Charlie	896	1043	(16)	1803039
17	16.5	1.9	5.6	chr19	3459649	3459701	(55157915)	+	G-rich	Low_complexity	1	54	(0)	1803344
13	0.0	0.0	10.7	chr19	3809991	3810018	(54807598)	+	(CAAA)n	Simple_repeat	1	28	(0)	1804069
2170	11.0	0.7	0.0	chr19	4095783	4096074	(54521542)	C	AluSx1	SINE/Alu	(18)	294	1	1804736
267	25.6	3.5	0.0	chr19	4173320	4173409	(54444207)	C	MIR3	SINE/MIR	(53)	155	64	1804947
1122	27.8	7.5	0.0	chr19	4258611	4259064	(54358552)	C	MER68	LTR/ERVL	(59)	504	14	1805187
2245	4.7	1.4	0.4	chr19	4259067	4259376	(54358240)	C	AluY	SINE/Alu	(0)	311	3	1805188
2403	9.4	0.0	0.3	chr19	4433590	4433897	(54183719)	C	AluSg	SINE/Alu	(1)	309	3	1805575
384	18.1	0.0	0.0	chr19	5044449	5044537	(53573079)	C	L1M4	LINE/L1	(404)	5785	5697	1807131
1096	11.8	0.7	0.0	chr19	5044539	5044690	(53572926)	C	AluSx	SINE/Alu	(2)	310	158	1807132
13	25.5	0.0	4.0	chr19	5095630	5095679	(53521937)	+	G-rich	Low_complexity	1	50	(0)	1807191
1183	15.5	1.6	1.1	chr19	5706140	5706326	(52911290)	C	AluJr4	SINE/Alu	(15)	297	110	1808613
11	24.2	2.6	0.0	chr19	5720827	5720865	(52896751)	+	G-rich	Low_complexity	1	40	(0)	1808644
13	11.2	3.2	3.1	chr19	5804091	5804121	(52813495)	+	(CAGCC)n	Simple_repeat	1	32	(0)	1808887
2090	10.1	1.1	0.0	chr19	6280458	6280735	(52336881)	C	AluSz6	SINE/Alu	(6)	306	26	1809798
1986	13.3	4.8	1.3	chr19	6301128	6301428	(52316188)	C	AluJb	SINE/Alu	(0)	312	1	1809846
332	30.6	3.9	8.0	chr19	6301513	6301612	(52316004)	+	MLT1K	LTR/ERVL-MaLR	412	517	(78)	1809847
2131	13.5	0.3	0.0	chr19	6301613	6301909	(52315707)	+	AluSx	SINE/Alu	1	298	(14)	1809848
2286	10.6	0.3	0.0	chr19	6469030	6469330	(52148286)	C	AluSq	SINE/Alu	(11)	302	1	1810310
1316	11.4	0.0	0.0	chr19	6585680	6585854	(52031762)	C	AluSx	SINE/Alu	(17)	295	121	1810647
14	21.8	0.0	0.0	chr19	6585900	6585936	(52031680)	+	(CCACCC)n	Simple_repeat	1	37	(0)	1810648
14	12.2	0.0	0.0	chr19	6585974	6586000	(52031616)	+	(AAATA)n	Simple_repeat	1	27	(0)	1810649
2129	11.2	1.7	0.3	chr19	7078436	7078730	(51538886)	C	AluSx	SINE/Alu	(13)	299	1	1811947
6527	22.8	6.2	4.6	chr19	7078731	7079229	(51538387)	C	L1MB5	LINE/L1	(5915)	1602	1109	1811944
321	30.8	7.4	7.8	chr19	7333365	7333711	(51283905)	C	L2b	LINE/L2	(56)	3370	2982	1812667
185	35.9	1.3	0.0	chr19	7333718	7333795	(51283821)	+	MIRb	SINE/MIR	176	254	(14)	1812659
19	14.9	0.0	0.0	chr19	7816556	7816586	(50801030)	+	(A)n	Simple_repeat	1	31	(0)	1813794
319	29.3	13.0	2.0	chr19	7816589	7816888	(50800728)	+	L2a	LINE/L2	1887	2224	(1195)	1813795
258	26.4	1.1	1.1	chr19	7851281	7851368	(50766248)	C	L2c	LINE/L2	(175)	3212	3125	1813858
268	16.7	0.0	2.0	chr19	7861649	7861697	(50755919)	C	MIR	SINE/MIR	(90)	172	125	1813872
12	16.7	7.7	3.6	chr19	7934998	7935049	(50682567)	+	(CTCCAGCGG)n	Simple_repeat	1	56	(0)	1813990
2097	9.6	2.2	7.3	chr19	8165047	8165356	(50452260)	+	MER4E1	LTR/ERV1	482	781	(0)	1814562
2429	8.1	0.0	0.7	chr19	8165376	8165682	(50451934)	+	AluSz	SINE/Alu	1	305	(7)	1814565
56	19.3	4.4	4.3	chr19	8165779	8165958	(50451658)	+	GA-rich	Low_complexity	1	188	(0)	1814566
267	22.0	7.4	6.5	chr19	8325206	8325296	(50292320)	+	L2a	LINE/L2	3069	3165	(261)	1815020
291	31.2	3.2	0.8	chr19	8578705	8578831	(50038785)	C	MIRc	SINE/MIR	(79)	151	24	1815635
417	33.0	6.6	1.9	chr19	8579035	8579296	(50038320)	C	L2b	LINE/L2	(212)	3163	2889	1815636
2070	14.1	1.0	0.0	chr19	8579297	8579600	(50038016)	+	AluJo	SINE/Alu	1	307	(5)	1815637
5094	17.2	11.8	1.1	chr19	9572101	9572780	(49044836)	+	L1M3f	LINE/L1	1241	1991	(4574)	1817673
1490	17.1	5.4	0.4	chr19	9572781	9573044	(49044572)	+	AluJb	SINE/Alu	35	312	(0)	1817674
5094	19.0	7.2	1.5	chr19	9573045	9573848	(49043768)	+	L1M3f	LINE/L1	1992	2835	(4730)	1817673
731	17.2	0.0	0.0	chr19	9675436	9675551	(48942065)	+	FLAM_C	SINE/Alu	1	116	(27)	1817897
1655	16.4	1.6	1.3	chr19	9769071	9769380	(48848236)	C	AluJr	SINE/Alu	(0)	312	2	1818054
348	31.1	7.5	2.2	chr19	10089406	10089543	(48528073)	+	MIRb	SINE/MIR	97	242	(26)	1818879
414	23.2	0.0	1.2	chr19	10269474	10269556	(48348060)	+	L2a	LINE/L2	3329	3410	(16)	1819330
466	25.5	2.4	2.2	chr19	10425264	10425436	(48192180)	+	MIRc	SINE/MIR	40	214	(54)	1819702
2347	10.3	0.7	0.3	chr19	10425704	10426013	(48191603)	+	AluSz	SINE/Alu	1	311	(1)	1819703
471	29.8	8.5	3.6	chr19	11300543	11300789	(47316827)	+	L1ME4b	LINE/L1	625	884	(8)	1821973
2132	6.8	0.4	0.4	chr19	11319318	11319638	(47297978)	+	AluSx4	SINE/Alu	1	310	(0)	1822037
2009	20.0	4.6	7.8	chr19	11319639	11319801	(47297815)	C	MER21C	LTR/ERVL	(373)	565	413	1822036
2018	13.1	1.7	0.7	chr19	11518616	11518912	(47098704)	+	AluJb	SINE/Alu	1	300	(12)	1822539
9161	5.2	0.9	17.9	chr19	11676263	11677933	(46939683)	C	SVA_B	Retroposon/SVA	(0)	1383	1	1822916
1097	22.2	11.8	1.8	chr19	11767468	11767924	(46849692)	C	LTR26E	LTR/ERV1	(0)	622	48	1823096
2185	20.0	6.3	1.9	chr19	12476575	12477042	(46140574)	C	LTR53-int	LTR/ERVL	(1343)	1986	1497	1824505
2800	22.4	2.2	1.3	chr19	12615802	12616303	(46001313)	C	L1MC2	LINE/L1	(559)	5785	5275	1824840
634	24.8	0.8	0.0	chr19	12616314	12616438	(46001178)	+	FLAM_A	SINE/Alu	3	128	(14)	1824842
13	15.9	2.7	2.6	chr19	12616484	12616520	(46001096)	+	(GGAGCT)n	Simple_repeat	1	38	(0)	1824843
1258	11.9	1.1	0.6	chr19	12616538	12616714	(46000902)	+	AluSc8	SINE/Alu	128	305	(6)	1824844
2341	8.1	0.7	0.0	chr19	12680834	12681131	(45936485)	C	AluSx3	SINE/Alu	(11)	300	1	1824984
444	31.6	1.3	3.8	chr19	12777855	12778012	(45839604)	C	MIRb	SINE/MIR	(0)	268	115	1825195
13	18.3	2.6	2.5	chr19	12957099	12957137	(45660479)	+	(CCGCGG)n	Simple_repeat	1	40	(0)	1825617
190	31.6	8.8	5.8	chr19	13071366	13071486	(45546130)	+	L3	LINE/CR1	1929	2053	(2046)	1825827
18	7.5	0.0	0.0	chr19	13098664	13098691	(45518925)	+	(CCCGC)n	Simple_repeat	1	28	(0)	1825872
700	18.5	0.0	0.8	chr19	14039295	14039425	(44578191)	C	MIR	SINE/MIR	(100)	162	33	1828421
239	14.6	0.0	0.0	chr19	14348814	14348854	(44268762)	C	L2b	LINE/L2	(1)	3374	3334	1829263
28	23.7	4.8	5.2	chr19	14690058	14690206	(43927410)	+	(GCGCG)n	Simple_repeat	1	148	(0)	1830169
41	26.0	0.0	4.8	chr19	15449623	15449767	(43167849)	+	(CCCCG)n	Simple_repeat	1	145	(0)	1831817
13	24.8	0.0	5.7	chr19	15449777	15449829	(43167787)	+	G-rich	Low_complexity	1	53	(0)	1831818
770	14.5	10.9	6.5	chr19	16299586	16299769	(42317847)	+	SATR1	Satellite	226	418	(5)	1833642
745	19.1	0.0	5.1	chr19	16299783	16299939	(42317677)	+	AluJb	SINE/Alu	3	151	(161)	1833643
1677	20.2	10.5	3.3	chr19	16299949	16300729	(42316887)	C	SATR1	Satellite	(164)	835	1	1833644
13	12.5	0.0	3.6	chr19	16325522	16325549	(42292067)	+	(GCG)n	Simple_repeat	1	28	(0)	1833725
1464	17.0	0.0	6.3	chr19	16486999	16487196	(42130420)	C	AluJo	SINE/Alu	(5)	307	124	1834042
2291	8.9	1.0	0.7	chr19	16487197	16487498	(42130118)	+	AluSq2	SINE/Alu	1	303	(10)	1834043
969	11.2	1.4	2.2	chr19	16874270	16875902	(41741714)	+	(CTGGT)n	Simple_repeat	1	1655	(0)	1835001
23760	6.3	0.2	0.2	chr19	16961042	16964978	(41652638)	+	L1PA6	LINE/L1	2	3925	(2221)	1835168
47	0.0	0.0	0.0	chr19	17246433	17246472	(41371144)	+	(AC)n	Simple_repeat	1	40	(0)	1835834
204	23.9	2.1	0.0	chr19	17246881	17246926	(41370690)	C	L2b	LINE/L2	(11)	3364	3318	1835835
12	20.5	2.0	5.9	chr19	17334383	17334432	(41283184)	+	(CCCCAG)n	Simple_repeat	1	51	(0)	1836049
1687	11.4	10.4	1.1	chr19	17496769	17497039	(41120577)	+	AluJr	SINE/Alu	1	299	(13)	1836517
351	24.0	12.9	0.8	chr19	17513844	17514010	(41103606)	C	L2b	LINE/L2	(226)	3200	3015	1836560
1308	20.7	7.6	0.8	chr19	17514056	17514410	(41103206)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	85	1836561
720	24.3	2.3	0.2	chr19	17533729	17533937	(41083679)	C	MER20	DNA/hAT-Charlie	(3)	216	2	1836620
2502	17.5	7.0	0.4	chr19	18064803	18065256	(40552360)	+	MER66B	LTR/ERV1	1	486	(0)	1837987
268	24.4	0.8	1.2	chr19	18065257	18065325	(40552291)	+	MIR1_Amn	SINE/MIR	105	173	(89)	1837986
71	1.6	0.0	0.0	chr19	18509594	18509658	(40107958)	+	(CA)n	Simple_repeat	1	65	(0)	1838982
2122	10.7	0.7	3.5	chr19	19384334	19384643	(39232973)	C	AluJb	SINE/Alu	(11)	301	1	1840890
186	31.7	11.8	1.2	chr19	19384678	19384760	(39232856)	C	Tigger19b	DNA/TcMar-Tigger	(334)	216	124	1840891
12	18.0	4.0	5.8	chr19	22807663	22807712	(35809904)	+	(CCCG)n	Simple_repeat	1	52	(0)	1845758
6091	10.8	0.6	0.2	chr19	23335046	23335952	(35281664)	C	L1P2	LINE/L1	(5271)	913	4	1846530
10229	4.6	0.5	11.3	chr19	23532837	23534388	(35083228)	C	SVA_C	Retroposon/SVA	(0)	1384	1	1846834
1392	26.2	4.0	1.8	chr19	23927912	23928306	(34689310)	+	MSTB	LTR/ERVL-MaLR	1	409	(19)	1847366
793	17.4	6.4	5.5	chr19	29216168	29216292	(29401324)	+	MLT1D	LTR/ERVL-MaLR	1	130	(375)	1849922
1858	12.5	10.0	5.5	chr19	29216293	29216655	(29400961)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1849923
1806	14.1	4.4	2.4	chr19	29759762	29760052	(28857564)	+	AluJb	SINE/Alu	1	297	(15)	1850777
1713	9.0	2.5	0.4	chr19	29760509	29760741	(28856875)	C	AluSx	SINE/Alu	(3)	309	72	1850778
14	17.6	0.0	4.8	chr19	29942570	29942632	(28674984)	+	(CGCCCCC)n	Simple_repeat	1	60	(0)	1851207
5712	9.1	3.1	1.7	chr19	29948558	29949954	(28667662)	C	SVA_C	Retroposon/SVA	(216)	1167	1	1851216
23	13.4	4.1	0.0	chr19	32618184	32618232	(25999384)	+	(TATATG)n	Simple_repeat	1	51	(0)	1855157
734	16.4	12.1	0.0	chr19	32618320	32618465	(25999151)	+	FRAM	SINE/Alu	1	166	(10)	1855158
1203	10.5	0.0	0.6	chr19	32618765	32618935	(25998681)	+	AluSx	SINE/Alu	137	306	(6)	1855159
22757	7.9	1.9	0.9	chr19	32781968	32788071	(25829545)	C	L1PA7	LINE/L1	(0)	6154	5	1855491
363	27.8	15.0	1.4	chr19	32810478	32810689	(25806927)	C	MIRb	SINE/MIR	(19)	249	4	1855536
2023	15.7	0.3	0.0	chr19	33151599	33151898	(25465718)	+	AluJr	SINE/Alu	1	301	(11)	1856298
247	17.0	8.6	0.0	chr19	33198025	33198077	(25419539)	C	MLT1O	LTR/ERVL-MaLR	(343)	199	142	1856400
3775	16.7	2.1	3.6	chr19	33333103	33333721	(25283895)	+	L1MB2	LINE/L1	5559	6168	(3)	1856616
483	23.5	2.9	0.8	chr19	33333813	33333945	(25283671)	C	MamTip3	DNA/hAT-Tip100	(231)	269	134	1856618
19	26.0	1.4	4.0	chr19	33373697	33373770	(25243846)	+	(GGC)n	Simple_repeat	1	75	(0)	1856707
4213	15.4	8.2	0.5	chr19	34075700	34076456	(24541160)	+	LTR8B	LTR/ERV1	1	820	(0)	1857838
3393	14.7	4.9	0.9	chr19	34076457	34076839	(24540777)	+	MER6A	DNA/TcMar-Tigger	223	603	(2)	1857837
3464	27.1	8.5	5.9	chr19	34090397	34090998	(24526618)	C	L2a	LINE/L2	(1204)	2215	1556	1857859
266	35.5	10.9	3.9	chr19	34091002	34091180	(24526436)	+	L2b	LINE/L2	3176	3368	(7)	1857863
2159	12.5	0.0	0.3	chr19	34495114	34495409	(24122207)	+	AluJr	SINE/Alu	1	295	(17)	1858761
60	0.0	0.0	0.0	chr19	34594653	34594703	(24022913)	+	(GT)n	Simple_repeat	1	51	(0)	1858885
3215	19.4	9.6	0.6	chr19	34712819	34713511	(23904105)	+	HUERS-P3-int	LTR/ERV1	718	1479	(7440)	1859029
1309	22.0	5.1	0.0	chr19	34713585	34713898	(23903718)	+	L1MA5	LINE/L1	2532	2862	(3278)	1859030
278	34.8	5.6	0.0	chr19	34734412	34734546	(23883070)	+	MIR	SINE/MIR	50	192	(70)	1859056
17	18.6	0.0	0.0	chr19	35138747	35138783	(23478833)	+	G-rich	Low_complexity	1	37	(0)	1859802
2268	10.4	0.3	0.7	chr19	35448796	35449103	(23168513)	C	AluSq2	SINE/Alu	(6)	307	1	1860432
261	26.4	0.0	1.6	chr19	35878698	35878814	(22738802)	C	MSR1	Satellite	(25)	115	1	1861350
15	14.3	2.4	4.7	chr19	35987017	35987058	(22630558)	+	(CCTTCC)n	Simple_repeat	1	43	(0)	1861619
11	24.8	0.0	2.5	chr19	35987143	35987182	(22630434)	+	(CTGTCT)n	Simple_repeat	1	40	(0)	1861620
1083	15.2	0.5	5.1	chr19	35987472	35987668	(22629948)	+	AluJb	SINE/Alu	120	307	(5)	1861621
2477	6.8	0.3	0.7	chr19	36190295	36190603	(22427013)	+	AluSp	SINE/Alu	1	308	(5)	1862078
597	23.6	3.2	8.1	chr19	36190604	36190694	(22426922)	+	MLT1D	LTR/ERVL-MaLR	106	188	(317)	1862077
2386	9.1	0.0	2.8	chr19	36190701	36191020	(22426596)	+	AluSz	SINE/Alu	1	311	(1)	1862079
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
20354	11.1	2.0	0.9	chr19	36327347	36330482	(22287134)	C	HERVS71-int	LTR/ERV1	(5801)	3177	4	1862325
4597	5.6	0.0	0.2	chr19	36330485	36331043	(22286573)	C	LTR6B	LTR/ERV1	(0)	558	1	1862325
11	21.6	10.9	0.0	chr19	36528911	36528974	(22088642)	+	(TTGTGTGA)n	Simple_repeat	1	71	(0)	1862727
15	16.8	0.0	0.0	chr19	36528950	36528976	(22088640)	+	(GT)n	Simple_repeat	1	27	(0)	1862728
11	20.5	5.1	0.0	chr19	37371221	37371259	(21246357)	+	G-rich	Low_complexity	1	41	(0)	1864324
23	24.0	0.0	0.0	chr19	38211687	38211736	(20405880)	+	(T)n	Simple_repeat	1	50	(0)	1866117
1694	12.5	0.3	13.3	chr19	38402454	38402798	(20214818)	+	AluJb	SINE/Alu	1	300	(12)	1866577
12	4.1	3.5	6.7	chr19	38402967	38402995	(20214621)	+	(GGGGC)n	Simple_repeat	1	30	(0)	1866578
194	28.6	1.4	2.8	chr19	38667666	38667737	(19949879)	+	X8_LINE	LINE/CR1	151	221	(75)	1867210
1599	15.2	0.0	2.2	chr19	38973699	38973968	(19643648)	+	AluJb	SINE/Alu	5	268	(44)	1867885
26	0.0	0.0	0.0	chr19	38973970	38973994	(19643622)	+	(TTTGA)n	Simple_repeat	1	25	(0)	1867886
50	16.7	0.0	0.0	chr19	38974008	38974085	(19643531)	+	(AT)n	Simple_repeat	1	78	(0)	1867887
12	27.7	0.0	0.0	chr19	40222398	40222436	(18395180)	+	(GCGGC)n	Simple_repeat	1	39	(0)	1870527
16	25.4	6.6	1.2	chr19	40717230	40717305	(17900311)	+	(GGC)n	Simple_repeat	1	81	(0)	1871779
684	10.1	0.0	5.0	chr19	40888225	40888323	(17729293)	+	AluSx3	SINE/Alu	200	293	(18)	1872167
2338	10.0	1.0	0.0	chr19	40888761	40888938	(17728678)	C	AluSq	SINE/Alu	(1)	312	133	1872168
422	23.1	0.6	11.5	chr19	41310906	41311096	(17306520)	+	L1MC5	LINE/L1	9135	9304	(0)	1873120
1336	21.0	2.2	1.9	chr19	41311105	41311375	(17306241)	+	AluJr	SINE/Alu	1	272	(40)	1873121
1537	15.8	0.0	2.1	chr19	41311377	41311450	(17306166)	+	AluJr	SINE/Alu	64	136	(176)	1873122
2164	11.4	0.0	1.3	chr19	41311451	41311749	(17305867)	+	AluSz6	SINE/Alu	1	295	(17)	1873123
18	20.0	3.8	1.8	chr19	41353639	41353691	(17263925)	+	(TCC)n	Simple_repeat	1	55	(0)	1873224
49	0.0	0.0	0.0	chr19	42303065	42303106	(16314510)	+	(GT)n	Simple_repeat	1	42	(0)	1874978
31	0.0	0.0	0.0	chr19	42370844	42370872	(16246744)	+	(G)n	Simple_repeat	1	29	(0)	1875128
6451	20.2	2.2	1.9	chr19	42791493	42793683	(15823933)	C	HUERS-P3b-int	LTR/ERV1	(5635)	3284	747	1875789
6389	20.7	2.1	1.6	chr19	43102282	43104470	(15513146)	C	HUERS-P3b-int	LTR/ERV1	(5635)	3284	747	1876233
17820	2.9	0.0	0.1	chr19	43864495	43867300	(14750316)	C	L1HS	LINE/L1	(3207)	2939	136	1877838
725	28.9	6.9	2.4	chr19	44140935	44141225	(14476391)	+	L2	LINE/L2	468	772	(2647)	1878265
194	31.7	9.6	0.8	chr19	44141949	44142072	(14475544)	+	MIR	SINE/MIR	104	239	(23)	1878266
469	29.1	5.4	0.0	chr19	44355036	44355210	(14262406)	+	L1MC5a	LINE/L1	2593	2777	(0)	1878600
236	22.6	12.5	6.3	chr19	44355255	44355396	(14262220)	+	L1ME4a	LINE/L1	5966	6117	(7)	1878601
357	26.2	8.3	0.0	chr19	44748055	44748176	(13869440)	C	MIRb	SINE/MIR	(101)	167	35	1879521
18	31.9	0.0	0.0	chr19	44748429	44748491	(13869125)	+	(CCCCC)n	Simple_repeat	1	63	(0)	1879522
86	18.9	2.1	4.6	chr19	44799672	44799904	(13817712)	+	GA-rich	Low_complexity	1	238	(0)	1879663
693	28.6	2.4	1.5	chr19	44871582	44871787	(13745829)	C	MIR	SINE/MIR	(35)	227	20	1879855
13	13.3	2.7	5.3	chr19	44926882	44926918	(13690698)	+	G-rich	Low_complexity	1	38	(0)	1879985
19	25.9	0.0	3.1	chr19	45500543	45500606	(13117010)	+	G-rich	Low_complexity	1	64	(0)	1881474
189	28.3	1.9	0.0	chr19	45500766	45500818	(13116798)	C	MIRc	SINE/MIR	(120)	148	95	1881475
23	12.2	5.2	3.3	chr19	45500824	45500881	(13116735)	+	(TTTC)n	Simple_repeat	1	61	(0)	1881476
252	32.5	2.5	0.0	chr19	45820686	45820762	(12796854)	C	MIRb	SINE/MIR	(186)	82	4	1882327
375	31.3	9.0	4.7	chr19	45820763	45820915	(12796701)	+	MIRb	SINE/MIR	98	259	(9)	1882328
1383	21.4	3.7	8.1	chr19	46396203	46396222	(12221394)	+	LTR109A2	LTR/ERV1	1	16	(403)	1883546
2052	8.3	4.4	2.1	chr19	46396223	46396510	(12221106)	+	AluSx1	SINE/Alu	1	295	(17)	1883547
36	18.0	0.0	10.7	chr19	46634355	46634494	(11983122)	+	(CCCTG)n	Simple_repeat	1	140	(0)	1884157
26	0.0	0.0	0.0	chr19	47226328	47226352	(11391264)	+	(CCCTGG)n	Simple_repeat	1	25	(0)	1885597
19	0.0	0.0	0.0	chr19	48055390	48055410	(10562206)	+	(TA)n	Simple_repeat	1	21	(0)	1887819
563	17.3	0.0	0.0	chr19	48055414	48055494	(10562122)	+	AluJr	SINE/Alu	132	212	(100)	1887820
204	19.1	2.3	0.0	chr19	48055549	48055590	(10562026)	+	MIRb	SINE/MIR	157	199	(69)	1887821
327	20.7	0.0	8.7	chr19	48055599	48055639	(10561977)	C	MER33	DNA/hAT-Charlie	(0)	324	291	1887822
2104	9.2	0.0	1.1	chr19	48558657	48558985	(10058631)	C	AluSx3	SINE/Alu	(0)	311	1	1889057
420	24.1	0.0	0.0	chr19	48693543	48693629	(9923987)	+	MER63D	DNA/hAT-Blackjack	253	339	(722)	1889391
359	31.0	9.0	3.7	chr19	48693710	48693860	(9923756)	+	MER20B	DNA/hAT-Charlie	22	169	(614)	1889392
251	21.3	6.2	1.6	chr19	49558179	49558240	(9059376)	C	MIR3	SINE/MIR	(63)	145	81	1891392
2127	11.1	1.0	4.1	chr19	49558244	49558558	(9059058)	C	AluSx1	SINE/Alu	(7)	305	1	1891393
288	26.2	5.0	0.2	chr19	49766133	49766271	(8851345)	+	MIRc	SINE/MIR	60	199	(31)	1891890
231	31.7	2.4	4.8	chr19	49798499	49798624	(8818992)	C	MIR3	SINE/MIR	(70)	138	16	1891973
180	34.6	1.3	1.3	chr19	49837891	49837969	(8779647)	+	Tigger19b	DNA/TcMar-Tigger	253	331	(219)	1892048
275	23.6	1.1	5.3	chr19	49838078	49838171	(8779445)	+	MER5A	DNA/hAT-Charlie	1	90	(99)	1892049
3934	22.9	7.0	5.0	chr19	49838175	49839413	(8778203)	+	Charlie8	DNA/hAT-Charlie	2	1266	(1162)	1892050
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
401	28.6	6.3	0.8	chr19	50257052	50257204	(8360412)	+	MIR	SINE/MIR	43	208	(22)	1893115
189	30.4	10.7	0.0	chr19	50257546	50257637	(8359979)	+	MIRc	SINE/MIR	30	132	(136)	1893116
2305	9.3	0.7	1.3	chr19	50297490	50297799	(8319817)	C	AluSq2	SINE/Alu	(5)	308	1	1893217
1800	21.4	8.2	6.4	chr19	50297800	50297967	(8319649)	C	MLT1C	LTR/ERVL-MaLR	(289)	178	5	1893215
1391	15.0	14.8	3.4	chr19	50297969	50298326	(8319290)	C	MER21A	LTR/ERVL	(404)	527	122	1893218
12	17.3	10.0	3.9	chr19	50325680	50325749	(8291867)	+	(GGCGCGC)n	Simple_repeat	1	77	(0)	1893278
357	19.8	6.5	0.0	chr19	50478650	50478735	(8138881)	C	MIRb	SINE/MIR	(115)	153	62	1893615
213	35.1	11.1	0.8	chr19	50478770	50478898	(8138718)	C	MIRc	SINE/MIR	(87)	181	38	1893616
235	31.2	5.2	1.4	chr19	50513146	50513255	(8104361)	C	MIRc	SINE/MIR	(120)	148	34	1893673
252	31.7	4.7	0.0	chr19	50531199	50531280	(8086336)	C	MIRb	SINE/MIR	(78)	190	105	1893717
19	0.0	0.0	0.0	chr19	50607990	50608010	(8009606)	+	(A)n	Simple_repeat	1	21	(0)	1893906
6145	14.6	4.7	0.5	chr19	52026213	52027168	(6590448)	+	LTR5B	LTR/ERVK	5	1002	(0)	1896662
708	27.2	10.9	8.3	chr19	52027169	52027313	(6590303)	C	Charlie2a	DNA/hAT-Charlie	(2713)	148	1	1896661
1100	24.2	3.6	4.6	chr19	52027373	52027653	(6589963)	+	MER77	LTR/ERVL	54	331	(273)	1896663
5978	15.7	3.9	0.7	chr19	52051722	52052691	(6564925)	+	LTR5B	LTR/ERVK	1	1002	(0)	1896702
25658	5.8	0.3	0.3	chr19	52052692	52056400	(6561216)	+	L1P2	LINE/L1	1747	5439	(715)	1896701
26	10.2	4.2	6.7	chr19	52369486	52369557	(6248059)	+	(TTTA)n	Simple_repeat	1	75	(0)	1897327
748	18.8	1.4	0.0	chr19	52369563	52369700	(6247916)	C	AluJb	SINE/Alu	(34)	278	139	1897328
439	15.3	3.9	4.8	chr19	52569560	52569662	(6047954)	+	L1M4	LINE/L1	4894	4995	(1151)	1897738
335	18.3	2.8	1.4	chr19	52569693	52569763	(6047853)	C	AluJb	SINE/Alu	(196)	116	45	1897739
265	16.4	8.8	0.0	chr19	52858109	52858191	(5759425)	+	AluJb	SINE/Alu	139	219	(83)	1898333
290	20.6	3.5	0.4	chr19	52924430	52924533	(5693083)	+	AluJb	SINE/Alu	21	220	(82)	1898471
434	11.0	5.2	5.2	chr19	52924585	52924661	(5692955)	C	L1M4	LINE/L1	(1160)	4986	4910	1898472
13	20.1	5.0	0.0	chr19	53365045	53365084	(5252532)	+	GA-rich	Low_complexity	1	42	(0)	1899204
248	21.1	5.1	0.3	chr19	53365103	53365212	(5252404)	C	FRAM	SINE/Alu	(17)	116	3	1899205
265	22.7	2.3	0.0	chr19	53394548	53394657	(5222959)	C	FRAM	SINE/Alu	(17)	116	4	1899262
312	24.5	2.0	0.0	chr19	53431390	53431511	(5186105)	C	AluJb	SINE/Alu	(82)	220	4	1899346
13	9.8	0.0	10.0	chr19	53431887	53431926	(5185690)	+	(CCGCC)n	Simple_repeat	1	40	(0)	1899347
15	20.3	4.3	7.3	chr19	53484529	53484585	(5133031)	+	(TATTA)n	Simple_repeat	1	56	(0)	1899437
1910	14.3	0.4	0.7	chr19	53484586	53484865	(5132751)	C	AluSx	SINE/Alu	(33)	279	1	1899438
15	20.3	4.3	7.3	chr19	53484866	53484899	(5132717)	+	(TATTA)n	Simple_repeat	2	33	(0)	1899439
43	2.5	0.0	0.0	chr19	53521322	53521362	(5096254)	+	(GT)n	Simple_repeat	1	41	(0)	1899508
11	20.8	0.0	2.9	chr19	53982304	53982338	(4635278)	+	G-rich	Low_complexity	1	35	(0)	1900734
23	17.0	0.0	0.0	chr19	53982369	53982414	(4635202)	+	(CCGCTC)n	Simple_repeat	1	46	(0)	1900735
53	14.4	5.0	4.0	chr19	53982517	53982657	(4634959)	+	(GGC)n	Simple_repeat	1	148	(0)	1900736
2223	10.5	0.3	0.0	chr19	54392687	54392981	(4224635)	+	AluSc8	SINE/Alu	5	300	(11)	1901635
2373	11.3	0.3	3.5	chr19	54392982	54393287	(4224329)	+	THE1B	LTR/ERVL-MaLR	57	363	(1)	1901634
303	27.0	4.5	2.0	chr19	54455760	54455941	(4161675)	+	MIR	SINE/MIR	2	187	(81)	1901786
325	28.0	2.2	4.3	chr19	54805193	54805219	(3812397)	C	LTR33A_	LTR/ERVL	(57)	474	450	1902329
1089	23.4	11.1	5.3	chr19	54805220	54805693	(3811923)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	1902330
30	15.8	1.3	5.1	chr19	55355146	55355223	(3262393)	+	(CCCCCCG)n	Simple_repeat	1	79	(0)	1903565
293	29.3	5.7	1.0	chr19	55355453	55355552	(3262064)	+	L2a	LINE/L2	3322	3426	(0)	1903566
1959	16.1	0.3	0.3	chr19	55355704	55356002	(3261614)	+	AluJb	SINE/Alu	1	299	(13)	1903567
428	23.3	11.7	0.0	chr19	55461195	55461323	(3156293)	+	MIRc	SINE/MIR	41	186	(82)	1903779
384	24.1	1.1	20.8	chr19	55559386	55559540	(3058076)	C	Zaphod3	DNA/hAT-Tip100	(1077)	128	2	1904009
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
864	14.8	9.9	3.7	chr19	55743995	55744184	(2873432)	+	L1MB3	LINE/L1	5981	6183	(0)	1904410
407	33.5	13.7	0.3	chr19	55744203	55744525	(2873091)	+	L2	LINE/L2	403	775	(2644)	1904411
231	31.0	9.9	2.0	chr19	56093331	56093432	(2524184)	C	HAL1M8	LINE/L1	(981)	2010	1900	1905101
603	24.5	23.3	0.0	chr19	56093581	56093992	(2523624)	C	HAL1M8	LINE/L1	(1295)	1696	1160	1905101
2416	9.7	0.7	0.0	chr19	56099433	56099740	(2517876)	+	AluSx1	SINE/Alu	3	312	(0)	1905109
205	26.4	0.0	1.9	chr19	56155659	56155712	(2461904)	C	MIR3	SINE/MIR	(90)	118	66	1905236
2158	18.5	4.5	8.8	chr19	56155720	56156518	(2461098)	C	MER21B	LTR/ERVL	(2)	866	195	1905237
82	15.3	1.6	4.2	chr19	56538768	56538955	(2078661)	+	G-rich	Low_complexity	1	191	(0)	1905962
484	23.0	12.1	0.7	chr19	56625144	56625296	(1992320)	C	MIRb	SINE/MIR	(90)	178	6	1906105
3833	13.6	1.3	2.2	chr19	56903998	56904384	(1713232)	C	L1PB3	LINE/L1	(113)	6041	5662	1906701
567	28.8	12.4	2.2	chr19	57364079	57364440	(1253176)	C	L2	LINE/L2	(667)	2752	2349	1907685
31543	14.0	4.2	2.1	chr19	57564659	57567399	(1050217)	C	LTR25-int	LTR/ERV1	(3703)	3485	633	1907989
2187	4.8	10.6	0.0	chr19	57770154	57770424	(847192)	C	AluSx	SINE/Alu	(9)	303	1	1908290
2004	9.3	3.4	2.1	chr19	57862960	57863115	(754501)	C	AluY	SINE/Alu	(16)	295	134	1908456
6893	17.5	6.5	8.2	chr19	57949303	57951117	(666499)	C	LTR2752	LTR/ERV1	(16)	2107	1	1908590
194	34.8	6.1	0.0	chr19	58003132	58003223	(614393)	C	MIR	SINE/MIR	(45)	217	120	1908686
13	14.8	0.0	3.1	chr19	58400171	58400202	(217414)	+	G-rich	Low_complexity	1	32	(0)	1909470
244	17.0	2.1	0.0	chr19	58400672	58400718	(216898)	C	L2b	LINE/L2	(1)	3374	3327	1909471
6455	13.9	14.4	5.6	chr2	10601	12198	(242181331)	C	TAR1	Satellite/telo	(218)	1893	132	1910812
631	29.0	19.8	0.8	chr2	496286	496816	(241696713)	+	L2	LINE/L2	1399	2055	(1364)	1911306
445	35.9	6.4	0.0	chr2	562211	562472	(241631057)	C	L1MEf	LINE/L1	(4550)	1865	1586	1911364
516	24.6	5.9	6.3	chr2	1091479	1091699	(241101830)	C	MER76	LTR/ERVL	(471)	220	1	1911889
260	24.7	0.0	5.2	chr2	1561749	1561825	(240631704)	+	MER63A	DNA/hAT-Blackjack	86	158	(52)	1912311
307	32.7	10.7	0.0	chr2	1561860	1562018	(240631511)	+	MIRb	SINE/MIR	74	251	(17)	1912312
24441	6.2	1.0	0.1	chr2	1759964	1766061	(240427468)	+	L1PA5	LINE/L1	4	6143	(11)	1912494
377	29.8	4.4	0.8	chr2	1825806	1825937	(240367592)	+	MLT1E1A	LTR/ERVL-MaLR	5	141	(539)	1912563
277	31.4	7.7	2.2	chr2	1825950	1826230	(240367299)	+	MLT1E1A	LTR/ERVL-MaLR	317	628	(26)	1912563
333	28.2	18.5	7.3	chr2	3023094	3023506	(239170023)	C	MamGypLTR1c	LTR/Gypsy	(331)	482	13	1913964
18	11.6	0.0	0.0	chr2	3153957	3153984	(239039545)	+	(GA)n	Simple_repeat	1	28	(0)	1914135
16	9.7	0.0	0.0	chr2	3519872	3519893	(238673636)	+	(A)n	Simple_repeat	1	22	(0)	1914570
185	33.0	6.8	1.8	chr2	3613230	3613340	(238580189)	C	OldhAT1	DNA/hAT-Ac	(824)	2024	1908	1914739
257	27.1	9.8	5.2	chr2	3920922	3921057	(238272472)	C	L1MEc	LINE/L1	(6221)	179	37	1915097
394	20.7	1.2	0.0	chr2	3921100	3921181	(238272348)	C	MER53	DNA/hAT	(4)	189	107	1915098
8998	8.5	0.5	1.2	chr2	6537365	6538646	(235654883)	+	L1P3	LINE/L1	2	1273	(5188)	1918660
7431	2.2	0.1	0.0	chr2	8561086	8562005	(233631524)	C	L1PA4	LINE/L1	(11)	6144	5224	1921566
2969	16.6	9.4	1.3	chr2	8562002	8562934	(233630595)	+	L1MA9	LINE/L1	5802	6810	(0)	1921563
2377	6.9	0.0	2.3	chr2	8664955	8665259	(233528270)	+	AluY	SINE/Alu	1	298	(13)	1921706
527	31.2	7.0	0.0	chr2	8874742	8874927	(233318602)	+	MLT1J	LTR/ERVL-MaLR	3	202	(310)	1921986
529	29.0	2.3	1.2	chr2	8874919	8875089	(233318440)	+	MLT1J	LTR/ERVL-MaLR	340	512	(0)	1921986
259	33.8	6.0	1.4	chr2	9777395	9777538	(232415991)	C	MIR3	SINE/MIR	(23)	185	35	1923631
319	29.3	0.0	1.2	chr2	10179602	10179684	(232013845)	C	Tigger5b	DNA/TcMar-Tigger	(0)	472	391	1924335
612	17.7	26.9	0.0	chr2	10179660	10179800	(232013729)	C	Tigger5	DNA/TcMar-Tigger	(2211)	195	3	1924336
843	23.8	0.0	4.5	chr2	10461802	10461880	(231731649)	+	MER3	DNA/hAT-Charlie	132	209	(0)	1924793
806	23.8	8.5	2.1	chr2	11055001	11055287	(231138242)	+	MER115	DNA/hAT-Tip100	35	341	(352)	1925947
670	28.8	9.6	0.0	chr2	11055336	11055571	(231137958)	+	MER115	DNA/hAT-Tip100	433	693	(0)	1925948
53	0.0	0.0	0.0	chr2	11132998	11133042	(231060487)	+	(CA)n	Simple_repeat	1	45	(0)	1926079
27955	1.6	0.2	0.1	chr2	14848065	14854078	(227339451)	+	L1PA2	LINE/L1	124	6148	(7)	1931813
2964	15.6	15.8	5.8	chr2	17629585	17630270	(224563259)	C	LTR27C	LTR/ERV1	(0)	767	1	1936271
11	26.9	3.3	3.2	chr2	18560106	18560166	(223633363)	+	(CAGCCC)n	Simple_repeat	1	63	(0)	1937638
3576	26.8	10.1	4.6	chr2	18570309	18571718	(223621811)	+	L1ME1	LINE/L1	4013	5480	(1461)	1937646
599	19.3	3.9	1.5	chr2	19022659	19022819	(223170710)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	294	1938259
423	30.4	5.5	2.8	chr2	19022981	19023156	(223170373)	+	MIRb	SINE/MIR	31	211	(57)	1938260
401	7.7	0.0	0.0	chr2	19915799	19915850	(222277679)	+	L1MA4A	LINE/L1	5899	5950	(353)	1939462
670	11.1	0.0	0.0	chr2	19915851	19915940	(222277589)	+	AluYj4	SINE/Alu	212	301	(10)	1939463
22634	10.1	1.6	5.2	chr2	19915949	19919098	(222274431)	+	L1PA7	LINE/L1	3	3152	(3309)	1939464
2308	9.3	8.3	1.5	chr2	20063207	20063544	(222129985)	+	THE1B	LTR/ERVL-MaLR	2	364	(0)	1939691
228	25.4	8.5	7.3	chr2	20063562	20063643	(222129886)	+	MIR1_Amn	SINE/MIR	74	155	(107)	1939692
723	10.2	8.3	4.7	chr2	20242604	20242731	(221950798)	C	AluJr	SINE/Alu	(179)	133	1	1940007
18273	6.7	0.9	0.1	chr2	20711414	20715894	(221477635)	+	L1P2	LINE/L1	1	4502	(1644)	1940763
2461	19.4	1.8	3.5	chr2	23442393	23442733	(218750796)	+	MLT1D	LTR/ERVL-MaLR	176	505	(0)	1944384
1081	20.8	3.0	6.5	chr2	23442734	23442833	(218750696)	C	MLT1G1	LTR/ERVL-MaLR	(394)	95	3	1944383
330	35.1	3.1	0.0	chr2	23442877	23443030	(218750499)	+	L4_A_Mam	LINE/RTE-X	3874	4032	(958)	1944380
302	24.1	6.1	5.3	chr2	23485231	23485344	(218708185)	+	L2c	LINE/L2	3273	3387	(0)	1944448
472	32.6	14.5	4.0	chr2	23572190	23572563	(218620966)	+	L2c	LINE/L2	2968	3387	(0)	1944547
2326	11.4	0.0	0.0	chr2	23576023	23576329	(218617200)	+	AluSx1	SINE/Alu	1	307	(5)	1944555
17	22.1	0.0	0.0	chr2	23926681	23926722	(218266807)	+	(CCCAGG)n	Simple_repeat	1	42	(0)	1945109
12	17.4	0.0	8.7	chr2	23926821	23926866	(218266663)	+	(GGCC)n	Simple_repeat	1	46	(0)	1945110
2316	10.4	0.0	1.3	chr2	24460443	24460751	(217732778)	C	AluSz6	SINE/Alu	(7)	305	1	1946197
1898	14.9	2.9	1.9	chr2	24460752	24460889	(217732640)	C	AluJo	SINE/Alu	(179)	133	1	1946196
26868	4.8	0.2	0.1	chr2	24800324	24806471	(217387058)	C	L1PA4	LINE/L1	(0)	6328	174	1946762
12	28.7	0.0	3.7	chr2	25673638	25673691	(216519838)	+	G-rich	Low_complexity	1	54	(0)	1948350
250	33.6	12.1	1.7	chr2	25673989	25674276	(216519253)	C	L2c	LINE/L2	(38)	3349	3028	1948351
12	22.3	0.0	7.4	chr2	25822128	25822181	(216371348)	+	A-rich	Low_complexity	1	54	(0)	1948632
23	16.2	2.0	0.0	chr2	26033766	26033814	(216159715)	+	G-rich	Low_complexity	1	50	(0)	1949188
1289	12.0	8.0	0.8	chr2	26797825	26798067	(215395462)	+	MER21A	LTR/ERVL	1	262	(669)	1950640
2408	13.8	7.8	9.3	chr2	26798076	26798270	(215395259)	+	MER21A	LTR/ERVL	377	538	(393)	1950640
2503	7.1	1.3	0.7	chr2	26798271	26798580	(215394949)	C	AluSx	SINE/Alu	(0)	312	1	1950641
235	29.5	7.7	1.4	chr2	28489312	28489428	(213704101)	+	MIRc	SINE/MIR	60	184	(84)	1953650
201	20.6	5.5	9.3	chr2	28489438	28489512	(213704017)	+	MIRc	SINE/MIR	8	79	(189)	1953651
248	28.2	0.0	4.0	chr2	28489504	28489577	(213703952)	+	MIR3	SINE/MIR	104	174	(34)	1953652
233	30.1	4.0	0.0	chr2	28490035	28490107	(213703422)	+	MIRc	SINE/MIR	46	121	(147)	1953653
282	30.2	0.0	1.1	chr2	28490106	28490192	(213703337)	+	MIRb	SINE/MIR	172	257	(11)	1953650
202	20.5	0.0	0.0	chr2	28490161	28490199	(213703330)	+	L2c	LINE/L2	3341	3379	(8)	1953654
615	28.3	7.6	0.9	chr2	28682971	28683191	(213510338)	+	MIRb	SINE/MIR	24	260	(8)	1953993
287	23.5	1.4	0.0	chr2	28683277	28683344	(213510185)	+	MIRb	SINE/MIR	192	260	(8)	1953994
12	19.8	7.9	4.9	chr2	30231338	30231413	(211962116)	+	(CGCAGC)n	Simple_repeat	1	82	(0)	1956612
324	24.4	16.6	2.2	chr2	30769098	30769231	(211424298)	C	L1M5	LINE/L1	(368)	5826	5670	1957522
503	28.1	5.7	0.0	chr2	30769276	30769474	(211424055)	C	L1M5	LINE/L1	(601)	5593	5383	1957522
683	29.4	13.2	5.8	chr2	30974494	30974890	(211218639)	+	L2c	LINE/L2	2956	3386	(1)	1957776
18636	14.9	1.7	1.8	chr2	31690995	31694869	(210498660)	C	HUERS-P3-int	LTR/ERV1	(4313)	4606	473	1958777
17571	7.6	0.4	0.4	chr2	32660602	32662964	(209530565)	C	L1PA7	LINE/L1	(822)	5639	3278	1960726
4835	9.8	2.2	0.0	chr2	32662963	32663629	(209529900)	C	L1PA7	LINE/L1	(5779)	682	1	1960726
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
21544	8.9	0.9	0.9	chr2	34466217	34472650	(207720879)	+	L1PA7	LINE/L1	1	6465	(4)	1963608
248	19.8	14.7	7.9	chr2	36693194	36693319	(205500210)	C	L1ME5	LINE/L1	(58)	6136	6001	1966367
1067	28.6	6.8	2.4	chr2	36693324	36693472	(205500057)	C	L2a	LINE/L2	(2)	3424	3274	1966368
2538	6.1	0.0	0.0	chr2	36693473	36693767	(205499762)	+	AluY	SINE/Alu	1	295	(16)	1966369
16	21.7	3.1	4.5	chr2	38377423	38377486	(203816043)	+	(CGCC)n	Simple_repeat	1	66	(0)	1969098
16	10.8	3.3	0.0	chr2	38602456	38602485	(203591044)	+	(GCC)n	Simple_repeat	1	31	(0)	1969543
22493	11.7	1.2	5.3	chr2	39807709	39814138	(202379391)	C	L1PA7	LINE/L1	(11)	6458	4	1971779
6050	7.2	0.1	0.0	chr2	40677061	40677825	(201515704)	+	HERV9N-int	LTR/ERV1	4609	5374	(0)	1972928
3901	8.6	3.1	3.2	chr2	40677826	40678381	(201515148)	+	LTR12_	LTR/ERV1	1	555	(133)	1972928
15432	17.4	3.8	1.9	chr2	41493990	41498519	(200695010)	+	HUERS-P3-int	LTR/ERV1	1	4889	(4030)	1974005
18	19.9	0.0	5.3	chr2	42101275	42101332	(200092197)	+	(CGCCCC)n	Simple_repeat	1	54	(0)	1974955
181	27.0	0.0	10.0	chr2	42920284	42920353	(199273176)	C	MIR3	SINE/MIR	(12)	196	134	1976552
41	13.6	0.0	3.7	chr2	42976140	42976220	(199217309)	+	GA-rich	Low_complexity	1	81	(0)	1976652
747	17.4	0.9	0.0	chr2	42976221	42976335	(199217194)	C	AluJo	SINE/Alu	(195)	117	2	1976653
418	34.0	6.7	0.6	chr2	43228062	43228248	(198965281)	+	MIRc	SINE/MIR	23	223	(45)	1977143
26750	3.5	0.4	0.3	chr2	43542870	43549021	(198644508)	C	L1PA3	LINE/L1	(3)	6152	1	1977658
887	19.4	5.3	11.1	chr2	43831473	43831613	(198361916)	C	MER33	DNA/hAT-Charlie	(164)	160	21	1978148
226	23.9	16.2	0.0	chr2	43832185	43832251	(198361278)	C	L2a	LINE/L2	(33)	3393	3314	1978150
15	12.2	5.3	2.5	chr2	44729724	44729761	(197463768)	+	GA-rich	Low_complexity	1	40	(0)	1979670
1015	21.9	0.5	0.0	chr2	44729792	44729978	(197463551)	+	MER5A	DNA/hAT-Charlie	1	188	(1)	1979671
21	7.7	0.0	0.0	chr2	44922239	44922266	(197271263)	+	(T)n	Simple_repeat	1	28	(0)	1979964
31	0.0	0.0	0.0	chr2	44922461	44922489	(197271040)	+	(AAT)n	Simple_repeat	1	29	(0)	1979965
441	30.7	8.2	4.6	chr2	45129477	45129865	(197063664)	+	L2-3_Crp	LINE/L2	553	956	(1140)	1980279
1481	25.1	10.8	2.1	chr2	45129871	45130394	(197063135)	+	L2	LINE/L2	2165	2739	(680)	1980277
294	33.6	5.2	1.5	chr2	45930270	45930399	(196263130)	C	MIR3	SINE/MIR	(14)	194	60	1981495
389	23.7	1.7	1.8	chr2	46206365	46206480	(195987049)	C	L1M7	LINE/L1	(943)	1478	1370	1981896
910	15.5	12.6	0.6	chr2	46206483	46206657	(195986872)	+	THE1D	LTR/ERVL-MaLR	1	199	(229)	1981897
1331	1.4	0.0	0.0	chr2	46206659	46206802	(195986727)	+	AluYb8	SINE/Alu	175	318	(0)	1981898
419	28.1	2.4	0.8	chr2	47403901	47404022	(194789507)	+	MIR	SINE/MIR	2	125	(137)	1984016
2176	9.4	2.0	0.3	chr2	47784462	47784760	(194408769)	C	AluSp	SINE/Alu	(9)	304	1	1984800
16	8.5	4.9	4.7	chr2	48314620	48314660	(193878869)	+	G-rich	Low_complexity	1	43	(0)	1985747
14	23.3	0.0	2.4	chr2	48314663	48314704	(193878825)	+	(TGC)n	Simple_repeat	1	42	(0)	1985748
16581	8.5	0.9	3.0	chr2	48703528	48708160	(193485369)	C	L1PA6	LINE/L1	(1629)	4517	5	1986420
6723	2.8	0.4	0.0	chr2	48739079	48739822	(193453707)	+	L1PA4	LINE/L1	5408	6154	(1)	1986477
28266	3.1	0.0	0.0	chr2	48739840	48745890	(193447639)	+	L1PA3	LINE/L1	136	6155	(0)	1986478
245	28.4	1.3	2.6	chr2	52316773	52316848	(189876681)	+	LTR78B	LTR/ERV1	255	329	(967)	1991132
17	24.0	0.0	6.1	chr2	53970798	53970863	(188222666)	+	(CCTCCC)n	Simple_repeat	1	66	(0)	1993469
19	16.7	7.4	0.0	chr2	53971071	53971124	(188222405)	+	(CGG)n	Simple_repeat	1	58	(0)	1993470
1910	13.2	0.0	1.5	chr2	53992920	53993191	(188200338)	+	AluSz6	SINE/Alu	1	268	(44)	1993526
1916	13.2	6.5	0.0	chr2	53993426	53993712	(188199817)	+	AluSx1	SINE/Alu	1	307	(5)	1993527
6956	7.4	2.0	1.9	chr2	54698422	54699828	(187493701)	+	SVA_C	Retroposon/SVA	53	1384	(0)	1994700
4505	15.5	7.2	10.8	chr2	54785483	54785925	(187407604)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(595)	473	2	1994839
21	10.4	0.0	0.0	chr2	54785926	54785969	(187407560)	+	(TA)n	Simple_repeat	1	44	(0)	1994841
56	20.4	1.4	2.8	chr2	55269449	55269589	(186923940)	+	(TTTC)n	Simple_repeat	1	143	(0)	1995600
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
25508	6.4	0.5	0.2	chr2	55462162	55468310	(186725219)	+	L1PA6	LINE/L1	1	6153	(1)	1995950
24601	4.8	0.8	0.0	chr2	55814033	55820140	(186373389)	+	L1PA4	LINE/L1	1	6147	(8)	1996637
1000	22.2	1.4	2.3	chr2	58871321	58871541	(183321988)	C	MER20	DNA/hAT-Charlie	(0)	219	1	2000382
1440	15.7	0.4	0.0	chr2	59603596	59603824	(182589705)	C	LSU-rRNA_Hsa	rRNA	(1)	5034	4805	2001332
929	32.2	7.8	3.0	chr2	59603833	59604660	(182588869)	C	L1MEc	LINE/L1	(1519)	1233	36	2001333
251	29.2	16.1	4.9	chr2	59886692	59886954	(182306575)	C	MamTip2	DNA/hAT-Tip100	(7)	298	1	2001702
1905	18.6	2.3	2.2	chr2	59887003	59887418	(182306111)	C	Eulor4	Unknown	(8)	416	29	2001703
216	32.8	17.3	2.2	chr2	60504970	60505106	(181688423)	+	MIRb	SINE/MIR	31	192	(76)	2002528
2231	12.8	0.0	0.0	chr2	60839788	60840093	(181353436)	+	AluSx1	SINE/Alu	1	306	(6)	2003178
650	19.6	0.9	0.0	chr2	60840159	60840265	(181353264)	C	AluJo	SINE/Alu	(203)	109	2	2003179
2591	5.0	1.0	0.0	chr2	60840276	60840575	(181352954)	C	AluY	SINE/Alu	(8)	303	1	2003180
4095	19.3	4.8	2.6	chr2	61924294	61925260	(180268269)	C	HERVFH21-int	LTR/ERV1	(5540)	989	1	2005491
4408	12.9	2.3	2.4	chr2	61938051	61938748	(180254781)	+	MER50B	LTR/ERV1	1	697	(0)	2005520
2565	6.4	0.0	0.6	chr2	62358571	62358882	(179834647)	C	AluYm1	SINE/Alu	(1)	310	1	2006365
575	23.2	6.8	2.8	chr2	62359148	62359329	(179834200)	C	MER34A	LTR/ERV1	(0)	571	382	2006366
24860	5.2	0.2	0.0	chr2	62605238	62611375	(179582154)	+	L1PA4	LINE/L1	2	6149	(6)	2006770
11792	16.2	2.5	3.1	chr2	63300408	63302947	(178890582)	+	HUERS-P3b-int	LTR/ERV1	272	2642	(4776)	2007694
12784	20.4	3.5	2.5	chr2	63518269	63520611	(178672918)	+	L1PA13	LINE/L1	97	2475	(4310)	2007964
17	9.1	0.0	0.0	chr2	64018742	64018765	(178174764)	+	(A)n	Simple_repeat	1	24	(0)	2008680
16	21.0	4.7	3.0	chr2	64019027	64019090	(178174439)	+	(CGGCGCC)n	Simple_repeat	1	67	(0)	2008681
21	29.5	2.6	0.0	chr2	64019220	64019297	(178174232)	+	(CCG)n	Simple_repeat	1	80	(0)	2008682
13	7.5	3.1	6.1	chr2	64019442	64019473	(178174056)	+	(GCCGG)n	Simple_repeat	1	33	(0)	2008683
11	32.8	0.0	0.0	chr2	64524881	64524929	(177668600)	+	(CCCTCC)n	Simple_repeat	1	49	(0)	2009514
15	9.1	0.0	0.0	chr2	64645377	64645400	(177548129)	+	(GAA)n	Simple_repeat	1	24	(0)	2009699
18	22.0	0.0	5.2	chr2	64653805	64653862	(177539667)	+	(GGC)n	Simple_repeat	1	58	(0)	2009702
25174	6.5	0.8	0.2	chr2	67738971	67745083	(174448446)	C	L1PA6	LINE/L1	(4)	6323	195	2014475
327	26.7	1.1	0.0	chr2	68018779	68018868	(174174661)	C	L1MEg	LINE/L1	(1610)	4536	4446	2014917
693	20.3	8.0	1.1	chr2	68018870	68019043	(174174486)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	204	2014918
1000	20.0	13.6	3.8	chr2	68019057	68019112	(174174417)	C	L1MEg	LINE/L1	(1894)	4252	4197	2014917
2261	10.2	0.0	1.9	chr2	68019113	68019425	(174174104)	C	AluSg4	SINE/Alu	(3)	307	1	2014919
24	17.1	4.3	2.8	chr2	70994826	70994894	(171198635)	+	(GCC)n	Simple_repeat	1	72	(0)	2019949
1343	23.1	9.4	3.9	chr2	71019219	71020049	(171173480)	C	SATR1	Satellite	(110)	877	1	2019996
2031	19.9	10.2	1.6	chr2	71042800	71044521	(171149008)	+	SATR1	Satellite	1	2248	(198)	2020024
1875	15.2	3.9	4.5	chr2	71118440	71118797	(171074732)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	10	2020156
24081	7.7	1.1	0.4	chr2	71245813	71251556	(170941973)	C	L1PA6	LINE/L1	(368)	5786	5	2020360
456	10.5	13.6	0.0	chr2	71275850	71275925	(170917604)	C	AluJb	SINE/Alu	(53)	259	172	2020404
16	12.3	0.0	5.1	chr2	71275927	71275965	(170917564)	+	(TTTTTCC)n	Simple_repeat	1	39	(0)	2020405
218	25.7	4.2	8.9	chr2	71276168	71276291	(170917238)	+	L2c	LINE/L2	3250	3367	(20)	2020406
7030	8.1	13.6	5.7	chr2	71444434	71445593	(170747936)	+	MER11A	LTR/ERVK	1	1266	(0)	2020652
2146	30.8	4.3	1.5	chr2	71445594	71446102	(170747427)	+	ERVL-E-int	LTR/ERVL	4574	5097	(570)	2020651
231	21.3	4.1	0.0	chr2	71698066	71698112	(170495417)	+	Charlie7a	DNA/hAT-Charlie	29	77	(195)	2021022
487	29.3	7.5	13.1	chr2	71698133	71698563	(170494966)	+	Charlie7	DNA/hAT-Charlie	128	535	(2077)	2021023
26100	5.3	0.1	0.2	chr2	72403731	72409869	(169783660)	+	L1PA4	LINE/L1	181	6317	(11)	2021986
1705	17.9	0.3	5.8	chr2	73132662	73132990	(169060539)	+	AluJo	SINE/Alu	2	312	(0)	2023156
41	16.4	0.0	3.4	chr2	73132993	73133080	(169060449)	+	GA-rich	Low_complexity	1	88	(0)	2023157
846	15.9	2.3	7.1	chr2	74199378	74199580	(167993949)	+	L1MB3	LINE/L1	5950	6143	(40)	2024987
475	18.9	1.3	0.0	chr2	74230466	74230539	(167962990)	C	AluJr	SINE/Alu	(101)	211	137	2025045
324	27.1	2.8	6.5	chr2	74328538	74328661	(167864868)	C	MIR3	SINE/MIR	(16)	192	76	2025221
506	26.5	12.4	1.4	chr2	74868372	74868561	(167324968)	+	MIRb	SINE/MIR	30	246	(22)	2026117
28	3.3	0.0	0.0	chr2	75138759	75138789	(167054740)	+	(TCAT)n	Simple_repeat	1	31	(0)	2026552
1233	23.3	0.0	0.0	chr2	75723244	75723531	(166469998)	C	L1PA10	LINE/L1	(6061)	292	5	2027421
1832	11.8	8.5	0.0	chr2	75723589	75723858	(166469671)	C	AluSg	SINE/Alu	(13)	297	3	2027422
2000	31.5	5.2	2.1	chr2	78190587	78191289	(164002240)	+	L1M3b	LINE/L1	6	731	(5550)	2030607
874	32.7	8.3	6.0	chr2	78191351	78191962	(164001567)	+	L1M3b	LINE/L1	671	1297	(4984)	2030607
12	11.5	3.3	3.2	chr2	84971721	84971750	(157221779)	+	G-rich	Low_complexity	1	31	(0)	2039812
12	14.6	0.0	5.9	chr2	85007704	85007737	(157185792)	+	(ATGT)n	Simple_repeat	1	34	(0)	2039911
2277	9.9	3.6	0.7	chr2	85007770	85008062	(157185467)	C	AluSz	SINE/Alu	(10)	302	1	2039912
15	16.9	10.6	0.0	chr2	85539084	85539130	(156654399)	+	(GC)n	Simple_repeat	1	52	(0)	2040998
12	16.6	4.5	4.3	chr2	85539144	85539187	(156654342)	+	(CCGCG)n	Simple_repeat	1	46	(0)	2040999
13	13.5	6.7	4.2	chr2	85539558	85539602	(156653927)	+	(TCCCT)n	Simple_repeat	1	48	(0)	2041000
6805	6.0	0.3	38.3	chr2	86548188	86550427	(155643102)	C	SVA_A	Retroposon/SVA	(0)	1387	2	2042825
16	20.8	0.0	4.2	chr2	86789608	86789655	(155403874)	+	(CCGCCC)n	Simple_repeat	1	48	(0)	2043198
407	28.8	7.9	4.7	chr2	86790011	86790181	(155403348)	C	MIRb	SINE/MIR	(87)	181	5	2043199
12	0.0	0.0	8.3	chr2	87342552	87342575	(154850954)	+	(GGAG)n	Simple_repeat	1	24	(0)	2044109
1203	21.2	9.6	0.0	chr2	87342804	87343086	(154850443)	C	L1MB3	LINE/L1	(73)	6110	5798	2044110
240	27.7	2.5	0.8	chr2	88399951	88400070	(153793459)	+	Charlie1a	DNA/hAT-Charlie	1073	1194	(261)	2045906
380	26.1	3.6	4.3	chr2	88400074	88400213	(153793316)	C	L1ME4a	LINE/L1	(17)	6107	5969	2045907
61	0.0	0.0	0.0	chr2	88454874	88454925	(153738604)	+	(GT)n	Simple_repeat	1	52	(0)	2046044
2448	17.9	6.6	3.2	chr2	88925658	88926187	(153267342)	+	L1MC1	LINE/L1	5960	6508	(0)	2046806
5352	4.6	1.0	0.3	chr2	88926199	88926868	(153266661)	+	SVA_B	Retroposon/SVA	709	1383	(0)	2046809
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
10490	10.1	5.1	0.5	chr2	91947273	91948754	(150244775)	+	L1P2	LINE/L1	5	1557	(4627)	2049104
263	25.6	5.5	1.6	chr2	94587522	94587644	(147605885)	+	MIRc	SINE/MIR	20	147	(121)	2049500
26445	5.0	0.5	0.0	chr2	95252087	95258210	(146935319)	C	L1PA4	LINE/L1	(2)	6153	7	2050417
1102	21.3	20.1	0.2	chr2	96345249	96345691	(145847838)	C	LTR50	LTR/ERVL	(242)	553	1	2051987
27698	3.7	0.1	0.1	chr2	96378982	96385131	(145808398)	+	L1PA3	LINE/L1	9	6155	(0)	2052043
12	16.7	7.5	0.0	chr2	96832078	96832117	(145361412)	+	(TTCCCT)n	Simple_repeat	1	43	(0)	2052874
12	14.4	7.5	2.3	chr2	97995381	97995420	(144198109)	+	(CCCGG)n	Simple_repeat	1	43	(0)	2054371
12	24.2	5.5	1.7	chr2	97995711	97995765	(144197764)	+	(CGG)n	Simple_repeat	1	58	(0)	2054372
12	22.2	4.8	0.0	chr2	97995801	97995842	(144197687)	+	(CGTG)n	Simple_repeat	1	44	(0)	2054373
221	25.4	10.1	4.8	chr2	98087458	98087612	(144105917)	C	MIRc	SINE/MIR	(96)	166	8	2054529
282	34.6	4.3	5.5	chr2	98183990	98184154	(144009375)	C	MIRb	SINE/MIR	(98)	170	8	2054677
233	17.0	1.9	0.0	chr2	98184314	98184366	(144009163)	+	L2a	LINE/L2	175	228	(3191)	2054678
329	27.1	7.6	7.0	chr2	98184368	98184538	(144008991)	+	L2	LINE/L2	1240	1411	(2008)	2054679
225	11.8	2.9	0.0	chr2	98850853	98850886	(143342643)	C	CR1-8_Crp	LINE/CR1	(37)	935	901	2055573
687	23.6	6.5	12.8	chr2	99695001	99695263	(142498266)	C	MER33	DNA/hAT-Charlie	(73)	251	3	2056860
229	9.1	0.0	0.0	chr2	99695497	99695529	(142498000)	C	hAT-16_Crp	DNA/hAT-Charlie	(2119)	1327	1295	2056863
14	16.4	2.9	0.0	chr2	100321817	100321850	(141871679)	+	(CCGCG)n	Simple_repeat	1	35	(0)	2057712
403	29.8	9.2	0.6	chr2	101219028	101219206	(140974323)	+	LTR33	LTR/ERVL	11	206	(309)	2059207
1995	14.3	1.3	0.3	chr2	101691263	101691562	(140501967)	+	AluJb	SINE/Alu	1	303	(9)	2060067
16	8.5	0.0	0.0	chr2	101691567	101691591	(140501938)	+	(AAC)n	Simple_repeat	1	25	(0)	2060068
1709	15.8	3.4	3.4	chr2	101691605	101691902	(140501627)	C	AluJo	SINE/Alu	(13)	299	2	2060069
607	21.2	7.5	1.8	chr2	101692008	101692170	(140501359)	+	LTR16C	LTR/ERVL	314	486	(3)	2060070
24722	5.2	0.3	0.0	chr2	102324372	102330501	(139863028)	+	L1PA4	LINE/L1	7	6153	(2)	2060949
17638	20.1	3.9	3.7	chr2	103826992	103831949	(138361580)	C	L1PA16	LINE/L1	(1752)	4921	8	2062755
16466	12.6	3.9	1.4	chr2	104607339	104610704	(137582825)	+	L1P2	LINE/L1	1	3576	(2570)	2063756
2302	11.9	0.0	0.0	chr2	104816968	104817270	(137376259)	C	AluSx	SINE/Alu	(9)	303	1	2064023
13	12.0	0.0	3.5	chr2	106194521	106194549	(135998980)	+	(GCGGC)n	Simple_repeat	1	29	(0)	2066008
242	31.3	3.0	6.4	chr2	106283092	106283231	(135910298)	C	L2c	LINE/L2	(0)	3387	3253	2066144
201	37.5	11.4	1.6	chr2	107591020	107591349	(134602180)	+	L2a	LINE/L2	3022	3421	(5)	2068078
265	29.2	6.6	5.8	chr2	108448919	108449038	(133744491)	C	MIRc	SINE/MIR	(123)	145	25	2069252
15	14.0	2.2	6.5	chr2	108449228	108449272	(133744257)	+	(GCG)n	Simple_repeat	1	46	(0)	2069253
720	13.8	2.9	4.3	chr2	108786254	108786391	(133407138)	C	FLAM_A	SINE/Alu	(6)	136	1	2069806
2394	7.8	1.0	0.3	chr2	109001723	109002029	(133191500)	C	AluY	SINE/Alu	(2)	309	1	2070108
204	33.6	11.3	5.3	chr2	109330460	109330591	(132862938)	+	L2b	LINE/L2	3235	3375	(0)	2070583
49	25.0	3.9	0.6	chr2	109330592	109330746	(132862783)	+	(GGAT)n	Simple_repeat	1	161	(0)	2070584
695	23.4	14.5	0.0	chr2	109355380	109355567	(132837962)	+	MER58A	DNA/hAT-Charlie	1	220	(4)	2070613
231	34.9	15.7	1.8	chr2	109355575	109355793	(132837736)	+	MamSINE1	SINE/tRNA-RTE	27	281	(9)	2070614
311	28.2	3.0	6.4	chr2	109677827	109677966	(132515563)	+	L2c	LINE/L2	3253	3387	(0)	2071089
14851	10.5	3.7	3.9	chr2	112612995	112615352	(129578177)	C	L1PA7	LINE/L1	(4021)	2478	10	2075417
1145	13.5	0.6	0.0	chr2	112615363	112615525	(129578004)	+	LTR8	LTR/ERV1	528	691	(0)	2075420
12	11.5	3.3	3.2	chr2	113036892	113036921	(129156608)	+	(GCCT)n	Simple_repeat	1	31	(0)	2076124
16	5.8	11.1	0.0	chr2	113212299	113212334	(128981195)	+	A-rich	Low_complexity	1	40	(0)	2076429
181	37.9	5.8	8.3	chr2	113750802	113750862	(128442667)	C	L2c	LINE/L2	(18)	3357	3289	2077255
1832	17.7	0.3	1.0	chr2	113750863	113751167	(128442362)	+	AluJb	SINE/Alu	1	303	(9)	2077256
225	30.4	12.8	4.3	chr2	113751168	113751335	(128442194)	C	L2c	LINE/L2	(80)	3307	3134	2077255
14	8.4	0.0	3.7	chr2	113756357	113756383	(128437146)	+	(CCTG)n	Simple_repeat	1	27	(0)	2077266
11	16.4	5.9	0.0	chr2	113756428	113756461	(128437068)	+	(CCGCGG)n	Simple_repeat	1	36	(0)	2077267
16	19.5	3.6	3.5	chr2	113756650	113756705	(128436824)	+	(CCCCGC)n	Simple_repeat	1	58	(0)	2077268
13	21.9	1.8	7.0	chr2	113756846	113756901	(128436628)	+	GA-rich	Low_complexity	1	57	(0)	2077269
17098	7.9	0.4	0.0	chr2	117579237	117582415	(124611114)	+	L1P2	LINE/L1	1	3172	(2974)	2082484
351	24.3	7.3	2.1	chr2	118376867	118377009	(123816520)	C	MER5A1	DNA/hAT-Charlie	(0)	166	16	2083616
184	30.9	0.0	1.8	chr2	118377035	118377090	(123816439)	+	MIR3	SINE/MIR	88	142	(66)	2083617
4325	18.8	6.9	3.3	chr2	120055617	120056305	(122137224)	C	L1MB7	LINE/L1	(1656)	4490	3763	2086377
2690	22.1	6.7	0.8	chr2	125955630	125956368	(116237161)	C	L1MC3	LINE/L1	(1)	7784	7002	2095297
277	24.6	7.6	6.0	chr2	126730022	126730138	(115463391)	+	MER63B	DNA/hAT-Blackjack	318	436	(0)	2096305
1834	17.7	1.0	0.7	chr2	127184820	127185119	(115008410)	C	AluJr	SINE/Alu	(11)	301	1	2097018
1736	22.6	3.4	16.9	chr2	127185120	127185328	(115008201)	C	L1MC5a	LINE/L1	(550)	2227	2020	2097016
31	21.5	0.0	0.0	chr2	127387386	127387447	(114806082)	+	(AC)n	Simple_repeat	1	62	(0)	2097356
15	19.3	4.1	2.0	chr2	127387975	127388023	(114805506)	+	(CGTCGCG)n	Simple_repeat	1	51	(0)	2097357
294	28.5	4.3	0.0	chr2	127532892	127533037	(114660492)	+	L1MC5a	LINE/L1	5684	5778	(345)	2097606
587	28.6	13.0	2.8	chr2	127698402	127698973	(114494556)	C	L2a	LINE/L2	(210)	3216	2575	2097834
250	28.6	13.1	4.5	chr2	127699261	127699392	(114494137)	C	L2a	LINE/L2	(1415)	2004	1860	2097834
5842	14.9	0.3	0.2	chr2	127832485	127833345	(114360184)	+	HERVL18-int	LTR/ERVL	2718	3579	(2468)	2098072
2187	7.0	1.0	0.0	chr2	128232270	128232555	(113960974)	C	AluSx4	SINE/Alu	(21)	289	1	2098926
389	21.7	0.6	0.6	chr2	128232563	128232654	(113960875)	+	FLAM_C	SINE/Alu	1	68	(65)	2098927
680	14.1	0.0	5.2	chr2	128232655	128232789	(113960740)	C	AluJb	SINE/Alu	(51)	261	134	2098928
12	20.1	2.9	0.0	chr2	128233034	128233067	(113960462)	+	(GGC)n	Simple_repeat	1	35	(0)	2098929
462	29.8	9.5	5.6	chr2	128320606	128320857	(113872672)	C	MIRb	SINE/MIR	(1)	267	5	2099033
706	31.6	12.2	3.9	chr2	129456039	129456793	(112736736)	+	L1M5	LINE/L1	3899	4729	(1417)	2100466
10348	4.8	3.8	0.1	chr2	129833026	129834328	(112359201)	+	SVA_B	Retroposon/SVA	31	1383	(0)	2100942
259	24.7	11.9	3.8	chr2	129934581	129934698	(112258831)	C	MIRb	SINE/MIR	(62)	168	44	2101089
17	6.5	0.0	7.9	chr2	130352239	130352276	(111841253)	+	(CTTTCT)n	Simple_repeat	1	38	(0)	2101701
553	30.1	7.0	3.0	chr2	130352666	130352898	(111840631)	C	MIR	SINE/MIR	(0)	262	20	2101702
20	20.1	2.5	9.9	chr2	130836822	130836939	(111356590)	+	G-rich	Low_complexity	1	121	(0)	2102408
13	17.6	0.0	10.7	chr2	131831762	131831771	(110361758)	+	(TGCC)n	Simple_repeat	1	52	(0)	2103778
19	13.1	4.8	0.0	chr2	131831772	131831813	(110361716)	+	(CCTGC)n	Simple_repeat	1	44	(0)	2103779
13	27.7	1.3	6.3	chr2	132256254	132256331	(109937198)	+	G-rich	Low_complexity	1	79	(0)	2104290
5684	9.6	1.3	0.0	chr2	132457508	132458261	(109735268)	C	L1PA6	LINE/L1	(5412)	945	182	2104628
184	22.6	3.6	3.6	chr2	133235061	133235115	(108958414)	+	MIR	SINE/MIR	97	151	(111)	2105670
2541	19.1	8.7	1.9	chr2	133235154	133235454	(108958075)	+	Tigger17a	DNA/TcMar-Tigger	24	351	(303)	2105671
1595	15.4	1.0	8.6	chr2	133235455	133235621	(108957908)	+	AluJb	SINE/Alu	1	144	(168)	2105672
12	23.1	2.3	2.3	chr2	134028035	134028077	(108165452)	+	(CCTGC)n	Simple_repeat	1	44	(0)	2106830
17	30.5	2.0	4.0	chr2	134719017	134719115	(107474414)	+	(GGCG)n	Simple_repeat	1	101	(0)	2107799
2592	21.3	9.3	4.8	chr2	136399813	136400485	(105793044)	+	MER21C	LTR/ERVL	188	892	(46)	2110638
568	28.4	7.1	4.3	chr2	136400741	136401067	(105792462)	+	L1ME4a	LINE/L1	5537	5873	(251)	2110640
17	0.0	3.2	6.2	chr2	138501746	138501781	(103691748)	+	(GCC)n	Simple_repeat	1	34	(0)	2113519
15	21.8	4.8	3.1	chr2	138501781	138501842	(103691687)	+	(CGGAGC)n	Simple_repeat	1	65	(0)	2113520
18	25.0	3.2	1.5	chr2	138501836	138501898	(103691631)	+	(GCG)n	Simple_repeat	1	65	(0)	2113521
3629	13.6	3.0	8.8	chr2	143908903	143909659	(98283870)	+	MER50	LTR/ERV1	1	711	(23)	2120659
434	30.3	10.1	0.7	chr2	144560615	144560767	(97632762)	+	MIRb	SINE/MIR	62	230	(38)	2121570
382	29.2	9.3	0.4	chr2	144560779	144560964	(97632565)	+	MIR3	SINE/MIR	3	207	(1)	2121571
23195	8.9	1.9	1.1	chr2	144784976	144790759	(97402770)	+	L1P3	LINE/L1	2	5862	(607)	2121844
2233	13.9	1.1	3.5	chr2	145311193	145311565	(96881964)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2122518
11064	11.3	0.6	0.0	chr2	145311566	145313134	(96880395)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	2122518
624	26.9	0.6	3.9	chr2	145853482	145853663	(96339866)	C	MER5B	DNA/hAT-Charlie	(2)	176	1	2123190
1772	17.7	0.3	5.2	chr2	145853798	145854124	(96339405)	+	AluJb	SINE/Alu	1	311	(1)	2123191
23941	8.2	0.4	0.1	chr2	145946187	145952338	(96241191)	C	L1PA6	LINE/L1	(0)	6154	1	2123293
23805	7.8	0.4	0.6	chr2	146641826	146648001	(95545528)	+	L1PA6	LINE/L1	174	6324	(3)	2124154
7407	16.6	2.4	2.0	chr2	146720615	146721871	(95471658)	+	LTR2752	LTR/ERV1	2	1263	(0)	2124250
21881	10.2	1.5	0.9	chr2	147580470	147586902	(94606627)	C	L1PA7	LINE/L1	(7)	6462	20	2125430
12	30.3	0.0	2.0	chr2	147845236	147845285	(94348244)	+	(GCT)n	Simple_repeat	1	50	(0)	2125798
15	13.9	0.0	0.0	chr2	147845343	147845366	(94348163)	+	(C)n	Simple_repeat	1	24	(0)	2125799
27436	2.6	0.2	0.0	chr2	148148941	148154956	(94038573)	C	L1PA2	LINE/L1	(2)	6153	126	2126215
34148	15.6	0.6	0.8	chr2	148253986	148259246	(93934283)	C	HERVL18-int	LTR/ERVL	(0)	6047	794	2126382
1955	20.1	2.0	1.5	chr2	148287553	148287946	(93905583)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2126437
19	10.4	3.2	0.0	chr2	148288056	148288086	(93905443)	+	(GT)n	Simple_repeat	1	32	(0)	2126438
2864	0.7	0.0	0.0	chr2	148288119	148288414	(93905115)	+	AluYa5	SINE/Alu	1	296	(15)	2126439
26694	3.6	0.3	0.1	chr2	148322845	148328854	(93864675)	C	L1PA3	LINE/L1	(0)	6155	138	2126482
211	16.2	0.0	0.0	chr2	149359315	149359351	(92834178)	+	MIRb	SINE/MIR	222	258	(10)	2127965
1770	13.3	2.5	4.9	chr2	151295236	151295520	(90898009)	C	AluJr	SINE/Alu	(26)	286	9	2130637
23294	9.2	1.0	2.6	chr2	152895577	152902053	(89291476)	+	L1PA7	LINE/L1	11	6467	(2)	2133129
12296	11.1	0.8	0.9	chr2	153327114	153329267	(88864262)	C	L1PA7	LINE/L1	(4332)	2167	1	2133609
339	32.0	10.7	1.5	chr2	154492786	154492988	(87700541)	+	MIRc	SINE/MIR	19	242	(26)	2135033
2030	13.2	3.5	1.8	chr2	154493116	154493448	(87700081)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	2135034
22628	11.6	1.5	0.8	chr2	155345508	155351990	(86841539)	C	L1PA8	LINE/L1	(7)	6480	6	2136085
407	13.2	2.9	0.0	chr2	155416687	155416754	(86776775)	C	LTR28C	LTR/ERV1	(0)	1129	1060	2136154
4188	13.6	3.8	0.6	chr2	155416757	155417422	(86776107)	C	LTR28C	LTR/ERV1	(441)	688	1	2136154
11738	13.6	2.5	3.0	chr2	155763400	155767519	(86426010)	C	L1P3	LINE/L1	(2272)	4189	3	2136568
1867	20.9	7.3	3.7	chr2	155767529	155767757	(86425772)	C	L1MCb	LINE/L1	(3016)	3548	3322	2136569
15	8.8	5.0	4.8	chr2	156436293	156436332	(85757197)	+	G-rich	Low_complexity	1	42	(0)	2137474
23144	9.7	1.3	2.3	chr2	158359386	158365813	(83827716)	+	L1PA7	LINE/L1	6	6464	(5)	2140047
18	17.2	0.0	0.0	chr2	158795340	158795378	(83398151)	+	(GCACTG)n	Simple_repeat	1	39	(0)	2140579
13094	8.2	0.2	0.1	chr2	159040228	159041920	(83151609)	C	L1PA6	LINE/L1	(4487)	1697	4	2141028
22479	17.4	8.0	3.1	chr2	160087151	160089260	(82104269)	C	HUERS-P3-int	LTR/ERV1	(6484)	2435	1	2142604
799	21.4	1.9	0.0	chr2	160180537	160180695	(82012834)	+	Charlie1a	DNA/hAT-Charlie	5	166	(1289)	2142728
24085	8.7	1.1	0.4	chr2	160180696	160187127	(82006402)	+	L1PA7	LINE/L1	9	6468	(1)	2142729
32	3.0	0.0	0.0	chr2	160493445	160493478	(81700051)	+	(CGG)n	Simple_repeat	1	34	(0)	2143159
12	5.6	0.0	0.0	chr2	160493479	160493497	(81700032)	+	(TGC)n	Simple_repeat	1	19	(0)	2143160
71	2.9	0.0	0.0	chr2	160493522	160493593	(81699936)	+	(TCC)n	Simple_repeat	1	72	(0)	2143161
21783	8.7	1.4	0.5	chr2	160623127	160628717	(81564812)	C	L1P2	LINE/L1	(2170)	5615	5	2143359
515	26.8	14.6	2.4	chr2	160628750	160628958	(81564571)	+	MIRb	SINE/MIR	20	245	(23)	2143360
9115	11.9	1.9	0.2	chr2	160806146	160807698	(81385831)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2143568
295	13.3	0.0	0.0	chr2	160807871	160807915	(81385614)	C	THE1-int	LTR/ERVL-MaLR	(928)	652	608	2143569
730	12.7	0.0	0.0	chr2	160807914	160808023	(81385506)	+	THE1D-int	LTR/ERVL-MaLR	1006	1115	(516)	2143570
9533	7.7	1.9	0.3	chr2	160808051	160810114	(81383415)	C	L1PA10	LINE/L1	(11)	6157	4067	2143571
184	32.5	1.1	1.1	chr2	160955190	160955276	(81238253)	C	MIR3	SINE/MIR	(1)	207	121	2143764
1805	11.0	6.2	0.0	chr2	161279685	161279974	(80913555)	+	L1PA10	LINE/L1	5860	6168	(0)	2144206
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
14	11.9	8.1	0.0	chr2	162344146	162344182	(79849347)	+	(CCTGCA)n	Simple_repeat	1	40	(0)	2145594
9344	8.1	1.5	0.3	chr2	163495492	163497382	(78696147)	+	L1PA10	LINE/L1	4068	5974	(194)	2147035
12251	11.7	1.9	4.7	chr2	163497386	163500000	(78693529)	+	L1P3	LINE/L1	3	2639	(3822)	2147036
331	25.0	14.5	5.9	chr2	169091533	169091651	(73101878)	+	MIR3	SINE/MIR	19	149	(59)	2154483
98	5.8	2.4	0.0	chr2	169361307	169361431	(72832098)	+	(TC)n	Simple_repeat	1	128	(0)	2154844
13589	8.4	2.0	0.3	chr2	170629934	170631757	(71561772)	+	L1PA5	LINE/L1	1	1856	(4328)	2156943
51	25.7	3.3	3.6	chr2	170770826	170771037	(71422492)	+	(GCCCCC)n	Simple_repeat	1	219	(0)	2157212
438	24.7	38.4	5.1	chr2	171595664	171595891	(70597638)	+	MamGypLTR2c	LTR/Gypsy	765	1068	(0)	2158716
8882	16.9	3.9	1.1	chr2	171610335	171611040	(70582489)	+	L1M2a1	LINE/L1	1	728	(6388)	2158752
2286	16.6	2.1	5.0	chr2	171611041	171611408	(70582121)	+	MSTB	LTR/ERVL-MaLR	1	355	(71)	2158753
776	18.9	0.8	0.0	chr2	172136706	172136827	(70056702)	C	AluJo	SINE/Alu	(189)	123	1	2159681
494	31.9	5.1	0.0	chr2	172136934	172137102	(70056427)	+	MIR3	SINE/MIR	2	179	(29)	2159682
25073	6.6	0.5	0.4	chr2	172264706	172270864	(69922665)	C	L1PA6	LINE/L1	(1)	6153	6	2159896
2094	12.9	1.2	7.6	chr2	172270865	172271233	(69922296)	C	LTR9	LTR/ERV1	(267)	345	1	2159895
32	9.4	1.6	3.2	chr2	172480372	172480432	(69713097)	+	(GGTGGTG)n	Simple_repeat	1	62	(0)	2160226
244	34.6	8.7	1.6	chr2	172480573	172480763	(69712766)	+	MIRc	SINE/MIR	38	243	(25)	2160227
24220	8.8	0.8	2.0	chr2	173559612	173566058	(68627471)	+	L1PA7	LINE/L1	1	6469	(0)	2161866
2215	17.3	10.5	3.2	chr2	174705755	174708571	(67484958)	C	SATR1	Satellite	(134)	3020	1	2163718
9604	3.5	0.2	16.9	chr2	175107527	175109188	(67084341)	+	SVA_C	Retroposon/SVA	1	1384	(0)	2164312
3543	20.6	4.9	7.2	chr2	175897279	175898045	(66295484)	C	MER21A	LTR/ERVL	(36)	895	142	2165383
13005	9.9	1.0	0.5	chr2	175912137	175914757	(66278772)	C	L1P3	LINE/L1	(3831)	2630	8	2165402
14	0.0	4.8	0.0	chr2	176162864	176162884	(66030645)	+	(AAAT)n	Simple_repeat	1	22	(0)	2165716
27	0.0	0.0	0.0	chr2	176638188	176638216	(65555313)	+	(A)n	Simple_repeat	1	29	(0)	2166429
10823	7.5	9.2	0.3	chr2	177007667	177009102	(65184427)	+	LTR12C	LTR/ERV1	3	1578	(1)	2166945
11	11.7	7.3	4.5	chr2	177264340	177264380	(64929149)	+	(CCCTGC)n	Simple_repeat	1	44	(0)	2167360
30	17.0	4.0	1.3	chr2	177264625	177264698	(64928831)	+	(CGG)n	Simple_repeat	1	77	(0)	2167361
2958	1.0	0.0	0.0	chr2	178923093	178923403	(63270126)	C	AluYa5	SINE/Alu	(0)	311	1	2169521
258	25.8	0.0	0.0	chr2	178965232	178965297	(63228232)	C	L1MC5a	LINE/L1	(26)	2751	2686	2169581
22596	9.3	1.5	1.7	chr2	178965324	178970927	(63222602)	+	L1PA7	LINE/L1	1	5611	(850)	2169582
22961	8.9	0.6	1.0	chr2	181088927	181095379	(61098150)	+	L1PA7	LINE/L1	8	6468	(1)	2172295
9108	14.0	5.6	1.7	chr2	182180345	182181902	(60011627)	C	L1PA10	LINE/L1	(4293)	2060	439	2173633
11427	12.2	2.2	2.5	chr2	183177689	183179982	(59013547)	C	L1PA8	LINE/L1	(4155)	2344	8	2175054
18	22.9	5.9	1.4	chr2	184598561	184598628	(57594901)	+	(GCC)n	Simple_repeat	1	72	(0)	2176765
23	26.5	1.2	2.5	chr2	184598877	184598956	(57594573)	+	(CGG)n	Simple_repeat	1	81	(0)	2176766
290	31.4	15.1	5.8	chr2	185418675	185418931	(56774598)	C	LTR88c	LTR/Gypsy?	(559)	303	19	2177778
2353	7.0	3.4	0.0	chr2	185419112	185419397	(56774132)	C	AluY	SINE/Alu	(15)	296	1	2177779
2190	16.1	6.9	0.0	chr2	186708897	186709288	(55484241)	C	MSTA	LTR/ERVL-MaLR	(0)	428	8	2179469
12338	12.1	1.4	3.5	chr2	187517161	187520609	(54672920)	C	L1P3	LINE/L1	(3011)	3450	1	2180481
22905	9.7	1.9	2.0	chr2	189351807	189358184	(52835345)	C	L1PA7	LINE/L1	(0)	6469	5	2182727
9500	5.2	0.1	12.7	chr2	189652920	189654495	(52539034)	+	SVA_B	Retroposon/SVA	3	1380	(3)	2183159
5411	5.0	2.2	0.0	chr2	189759760	189760437	(52433092)	C	SVA_B	Retroposon/SVA	(2)	1381	689	2183328
548	24.5	13.5	7.8	chr2	189760440	189760511	(52433018)	+	MER102a	DNA/hAT-Charlie	57	130	(200)	2183329
2335	10.0	0.7	0.0	chr2	189760512	189760812	(52432717)	+	AluSc8	SINE/Alu	2	304	(7)	2183330
17	3.2	5.9	2.8	chr2	189784481	189784514	(52409015)	+	(GCGGGT)n	Simple_repeat	1	36	(0)	2183366
395	21.9	10.4	4.2	chr2	191019976	191020190	(51173339)	+	L1ME4a	LINE/L1	5819	6048	(76)	2185240
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
18087	6.8	0.3	0.0	chr2	191160585	191164944	(51028585)	+	L1P2	LINE/L1	14	4369	(1777)	2185444
16	13.0	2.9	0.0	chr2	192495466	192495499	(49698030)	+	A-rich	Low_complexity	1	35	(0)	2187307
2181	16.2	0.6	0.6	chr2	192495910	192496274	(49697255)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	2187308
1988	21.2	9.0	2.9	chr2	192600189	192602820	(49590709)	+	SATR1	Satellite	1	2793	(43)	2187440
5873	27.8	5.8	4.9	chr2	192602948	192603605	(49589924)	C	L1M2	LINE/L1	(4593)	2256	1612	2187441
23838	8.0	0.7	0.1	chr2	192925168	192931291	(49262238)	C	L1PA6	LINE/L1	(3)	6151	9	2187850
10036	18.5	3.4	4.3	chr2	194603268	194605365	(47588164)	+	HUERS-P3b-int	LTR/ERV1	25	2102	(5316)	2189871
27705	2.3	0.2	0.0	chr2	195067522	195073543	(47119986)	C	L1PA2	LINE/L1	(0)	6155	124	2190435
2533	14.2	0.5	1.2	chr2	195073545	195073950	(47119579)	+	MER57A1	LTR/ERV1	30	432	(0)	2190434
15044	12.5	1.9	1.2	chr2	195289855	195292166	(46901363)	+	L1PA10	LINE/L1	2	2330	(4023)	2190695
24323	6.1	1.2	0.2	chr2	196089202	196095391	(46098138)	+	L1PA5	LINE/L1	177	6326	(1)	2191879
11	11.1	6.9	0.0	chr2	196171041	196171069	(46022460)	+	(CACACG)n	Simple_repeat	1	31	(0)	2192006
44	26.5	1.6	5.2	chr2	196171682	196171870	(46021659)	+	G-rich	Low_complexity	1	192	(0)	2192007
26550	1.9	0.2	0.0	chr2	196521489	196527500	(45666029)	C	L1PA2	LINE/L1	(7)	6148	128	2192527
290	25.5	15.2	4.7	chr2	196527587	196527779	(45665750)	+	Charlie16a	DNA/hAT-Charlie	64	280	(62)	2192528
23	21.9	0.0	0.0	chr2	196926620	196926672	(45266857)	+	(GCC)n	Simple_repeat	1	53	(0)	2193088
13	15.0	9.1	3.3	chr2	196926746	196926800	(45266729)	+	(GCGCCT)n	Simple_repeat	1	60	(0)	2193089
27536	2.8	0.4	0.0	chr2	197728963	197734964	(44458565)	+	L1PA4	LINE/L1	298	6325	(3)	2194530
1063	6.9	5.2	0.0	chr2	197747800	197747944	(44445585)	+	L1PA10	LINE/L1	4769	4921	(1225)	2194548
23404	8.4	1.5	1.7	chr2	197747954	197754294	(44439235)	+	L1PA7	LINE/L1	8	6465	(4)	2194549
2629	22.7	10.6	4.0	chr2	198230755	198231668	(43961861)	C	L1M8	LINE/L1	(798)	1557	565	2195228
441	14.7	1.3	0.0	chr2	200600142	200600216	(41593313)	C	L1MC5a	LINE/L1	(358)	2419	2344	2198569
1766	18.2	1.0	0.0	chr2	200679804	200680094	(41513435)	+	AluJo	SINE/Alu	5	298	(14)	2198688
3696	23.9	8.2	10.5	chr2	201083013	201083347	(41110182)	C	L1M5	LINE/L1	(1857)	4289	3955	2199465
2227	9.5	2.6	0.0	chr2	201083348	201083642	(41109887)	C	AluSp	SINE/Alu	(6)	307	5	2199474
26231	5.3	0.4	0.0	chr2	201290545	201296670	(40896859)	+	L1PA4	LINE/L1	2	6150	(5)	2199895
184	28.4	11.9	0.0	chr2	202088338	202088411	(40105118)	C	MIRb	SINE/MIR	(3)	265	182	2201183
223	10.4	9.4	5.9	chr2	202088768	202088818	(40104711)	C	L2a	LINE/L2	(0)	3426	3374	2201184
313	28.4	10.4	1.8	chr2	202088788	202089000	(40104529)	C	MIRc	SINE/MIR	(16)	246	20	2201185
2478	7.0	1.0	0.3	chr2	204341533	204341834	(37851695)	+	AluY	SINE/Alu	1	304	(7)	2205487
393	28.0	6.3	3.8	chr2	204497071	204497318	(37696211)	+	MER91B	DNA/hAT-Tip100	1	196	(3328)	2205699
15	21.0	3.9	1.9	chr2	206085225	206085275	(36108254)	+	(CCCGG)n	Simple_repeat	1	53	(0)	2207943
15	10.9	4.4	6.4	chr2	206085808	206085852	(36107677)	+	(GCCC)n	Simple_repeat	1	47	(0)	2207944
1603	12.9	10.4	2.2	chr2	206220999	206221315	(35972214)	C	MER34A	LTR/ERV1	(0)	571	226	2208250
1714	11.0	0.8	0.4	chr2	206221315	206221552	(35971977)	+	7SK	RNA	1	239	(92)	2208251
1093	16.1	2.1	14.2	chr2	206221550	206221824	(35971705)	C	MER34A	LTR/ERV1	(330)	241	1	2208250
10834	19.0	5.2	4.0	chr2	206287127	206290049	(35903480)	C	L1MA5	LINE/L1	(4142)	3424	455	2208390
23006	7.1	0.5	0.0	chr2	206411079	206416210	(35777319)	C	L1P2	LINE/L1	(1003)	5143	2	2208592
2004	11.7	0.0	5.5	chr2	206416218	206416525	(35777004)	C	AluSz6	SINE/Alu	(21)	291	1	2208593
2747	21.4	6.5	5.5	chr2	207589567	207590524	(34603005)	C	L1MC	LINE/L1	(2106)	4040	3073	2210277
200	28.8	16.5	7.9	chr2	208184275	208184527	(34009002)	+	Tigger19b	DNA/TcMar-Tigger	131	409	(141)	2211489
23402	14.7	1.9	2.1	chr2	208391404	208395038	(33798491)	C	HUERS-P3-int	LTR/ERV1	(4422)	4497	890	2211794
67	0.0	0.0	0.0	chr2	209208986	209209042	(32984487)	+	(GT)n	Simple_repeat	1	57	(0)	2212754
17	18.9	2.8	0.0	chr2	209209070	209209105	(32984424)	+	(GT)n	Simple_repeat	1	37	(0)	2212754
14	13.2	2.9	2.8	chr2	209771905	209771939	(32421590)	+	G-rich	Low_complexity	1	36	(0)	2213450
18	23.3	2.0	0.0	chr2	209772220	209772269	(32421260)	+	(GCC)n	Simple_repeat	1	51	(0)	2213451
10557	3.6	0.5	8.1	chr2	210950108	210951606	(31241923)	+	SVA_C	Retroposon/SVA	1	1384	(0)	2214975
23791	6.9	0.6	0.6	chr2	212875722	212881888	(29311641)	+	L1PA5	LINE/L1	4	6154	(0)	2217533
755	17.5	1.6	0.0	chr2	215377978	215378103	(26815426)	C	AluJr	SINE/Alu	(180)	132	5	2221002
12	8.9	4.2	0.0	chr2	215409942	215409965	(26783564)	+	(GGT)n	Simple_repeat	1	25	(0)	2221046
21577	9.4	1.0	0.6	chr2	215819022	215825477	(26368052)	+	L1PA7	LINE/L1	2	6469	(0)	2221683
1486	23.1	8.5	2.8	chr2	216797814	216798244	(25395285)	+	MLT1D	LTR/ERVL-MaLR	45	502	(3)	2223450
654	30.1	4.9	0.5	chr2	216798312	216798505	(25395024)	C	LTR33	LTR/ERVL	(299)	216	14	2223451
1585	26.0	4.0	2.0	chr2	217196882	217197376	(24996153)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2224046
1429	20.1	8.9	2.1	chr2	217277080	217277415	(24916114)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	5	2224158
338	28.4	2.8	1.4	chr2	217277424	217277566	(24915963)	C	L1ME4b	LINE/L1	(512)	380	236	2224159
2440	9.6	0.0	0.0	chr2	217448250	217448542	(24744987)	+	AluSc	SINE/Alu	4	296	(13)	2224411
3900	11.9	1.8	0.0	chr2	217448738	217449281	(24744248)	C	MER41A	LTR/ERV1	(0)	554	1	2224412
301	27.9	3.7	0.0	chr2	218074265	218074343	(24119186)	+	MIR	SINE/MIR	29	110	(152)	2225431
208	25.0	5.7	1.8	chr2	218074334	218074415	(24119114)	+	MIRb	SINE/MIR	157	235	(33)	2225431
280	33.7	7.7	1.6	chr2	218074457	218074640	(24118889)	C	L2c	LINE/L2	(6)	3381	3186	2225432
13	17.0	3.0	0.0	chr2	218888895	218888927	(23304602)	+	(ATTTT)n	Simple_repeat	1	34	(0)	2226981
2291	10.6	0.0	0.3	chr2	218951952	218952253	(23241276)	+	AluSp	SINE/Alu	1	301	(12)	2227109
226	32.8	4.8	1.6	chr2	218952381	218952501	(23241028)	+	L2c	LINE/L2	3225	3349	(38)	2227110
754	28.1	3.0	4.3	chr2	219490084	219490317	(22703212)	C	MIRb	SINE/MIR	(34)	234	4	2228024
10057	5.0	0.8	9.2	chr2	219750537	219752021	(22441508)	C	SVA_B	Retroposon/SVA	(5)	1378	19	2228433
25227	6.7	0.7	0.1	chr2	220382218	220388343	(21805186)	C	L1PA5	LINE/L1	(1)	6153	4	2229478
202	6.2	0.0	3.0	chr2	220528979	220529011	(21664518)	C	MER91C	DNA/hAT-Tip100	(32)	108	77	2229673
26520	2.1	0.1	0.0	chr2	221984563	221990586	(20202943)	+	L1PA2	LINE/L1	124	6151	(4)	2231917
49	8.2	1.2	2.4	chr2	222004811	222004891	(20188638)	+	(AT)n	Simple_repeat	1	82	(0)	2231938
2991	9.3	0.5	7.5	chr2	222004892	222005275	(20188254)	C	MLT2A1	LTR/ERVL	(60)	384	1	2231936
17272	7.4	0.7	1.2	chr2	222366279	222368886	(19824643)	C	L1P2	LINE/L1	(3553)	2593	5	2232483
324	30.3	2.9	9.6	chr2	222368913	222369131	(19824398)	+	L1MEg	LINE/L1	768	971	(5965)	2232481
12	26.4	2.1	2.0	chr2	224038839	224038886	(18154643)	+	(CCCGGCT)n	Simple_repeat	1	49	(0)	2235309
18	17.5	2.1	2.1	chr2	224039336	224039382	(18154147)	+	(CCCCG)n	Simple_repeat	1	48	(0)	2235310
16511	9.8	2.7	2.1	chr2	224484837	224489748	(17703781)	+	L1P3	LINE/L1	6	4981	(1480)	2236018
23160	11.3	1.7	1.1	chr2	225824276	225830744	(16362785)	+	L1PA8	LINE/L1	25	6486	(1)	2238055
15	12.2	0.0	0.0	chr2	226851744	226851770	(15341759)	+	(TTG)n	Simple_repeat	1	27	(0)	2239546
6274	8.0	1.9	6.7	chr2	227231378	227231526	(14962003)	C	L1MA1	LINE/L1	(6)	6296	6150	2240121
9685	17.4	2.9	3.0	chr2	229501880	229503689	(12689840)	+	MER21-int	LTR/ERVL	2333	4140	(51)	2243628
12	0.0	5.3	0.0	chr2	229921957	229921975	(12271554)	+	(GCG)n	Simple_repeat	1	20	(0)	2244313
204	26.2	16.4	0.0	chr2	229974250	229974310	(12219219)	+	MIR3	SINE/MIR	28	100	(108)	2244451
327	16.9	1.3	4.9	chr2	229974311	229974391	(12219138)	+	LTR82B	LTR/ERVL	1	78	(752)	2244452
1199	24.5	5.8	0.6	chr2	229974412	229974723	(12218806)	+	LTR82B	LTR/ERVL	184	512	(318)	2244452
23223	10.5	1.5	3.6	chr2	230603340	230607843	(11585686)	+	L1PA7	LINE/L1	1	4486	(1975)	2245348
1286	18.1	13.3	2.6	chr2	230756144	230756450	(11437079)	C	Tigger3a	DNA/TcMar-Tigger	(3)	345	1	2245652
208	26.2	1.6	0.0	chr2	231052833	231052893	(11140636)	C	MIRb	SINE/MIR	(186)	82	21	2246150
382	34.2	9.0	2.4	chr2	231053416	231053789	(11139740)	C	L2b	LINE/L2	(0)	3375	2975	2246151
13	27.2	3.1	3.0	chr2	232633534	232633598	(9559931)	+	(CCGC)n	Simple_repeat	1	67	(0)	2249014
21	12.8	6.2	4.3	chr2	232633636	232633700	(9559829)	+	(CGCGTCC)n	Simple_repeat	1	69	(0)	2249015
21	18.8	3.3	7.5	chr2	232633795	232633885	(9559644)	+	(GCCCGA)n	Simple_repeat	1	94	(0)	2249016
1030	29.1	9.9	2.5	chr2	234243080	234243859	(7949670)	C	L1MEd	LINE/L1	(3325)	2821	1955	2251633
2072	15.0	2.9	3.8	chr2	234243864	234244299	(7949230)	C	MER51B	LTR/ERV1	(2)	375	1	2251634
357	26.0	3.4	15.5	chr2	234682603	234682802	(7510727)	C	MLT1H	LTR/ERVL-MaLR	(242)	307	133	2252368
343	26.3	10.0	0.0	chr2	234682736	234682834	(7510695)	C	MLT2E	LTR/ERVL	(487)	141	32	2252369
1203	21.8	6.7	5.7	chr2	235389747	235390116	(6803413)	C	MLT1A	LTR/ERVL-MaLR	(0)	467	1	2253524
1614	21.0	11.7	1.1	chr2	235390118	235390551	(6802978)	C	MLT1D	LTR/ERVL-MaLR	(19)	486	1	2253525
1483	12.4	0.5	0.9	chr2	235888503	235888720	(6304809)	+	AluJo	SINE/Alu	82	298	(14)	2254233
225	20.8	20.0	0.0	chr2	236079131	236079202	(6114327)	C	L2c	LINE/L2	(30)	3357	3268	2254478
1687	11.2	5.0	1.6	chr2	236143403	236143653	(6049876)	+	AluSx1	SINE/Alu	39	298	(14)	2254579
989	19.1	3.4	7.4	chr2	236143952	236144166	(6049363)	+	MER63A	DNA/hAT-Blackjack	1	206	(4)	2254580
268	30.2	3.0	0.0	chr2	236624431	236624526	(5569003)	+	L3	LINE/CR1	3949	4047	(52)	2255256
311	25.0	7.7	3.6	chr2	237142108	237142244	(5051285)	+	L1M6B	LINE/L1	25	167	(202)	2255994
374	32.7	11.3	1.8	chr2	237182764	237183105	(5010424)	C	LTR16C	LTR/ERVL	(110)	379	1	2256052
372	28.3	5.8	4.5	chr2	237548001	237548214	(4645315)	C	MIRc	SINE/MIR	(27)	241	23	2256501
480	30.5	13.6	1.0	chr2	237666020	237666211	(4527318)	+	MIRb	SINE/MIR	29	248	(20)	2256687
13	21.8	0.0	4.3	chr2	237956062	237956107	(4237422)	+	G-rich	Low_complexity	1	46	(0)	2257143
2166	12.9	0.7	0.3	chr2	238571235	238571536	(3621993)	+	AluJb	SINE/Alu	2	304	(8)	2257979
269	21.1	6.0	4.4	chr2	238571537	238571550	(3621979)	C	LTR16E2	LTR/ERVL	(101)	467	453	2257978
185	30.8	8.0	2.3	chr2	238628474	238628649	(3564880)	+	MIR3	SINE/MIR	22	208	(0)	2258052
1304	19.6	8.2	0.0	chr2	238643285	238643747	(3549782)	C	Tigger7	DNA/TcMar-Tigger	(36)	514	1	2258069
442	21.5	6.5	5.3	chr2	238884844	238884995	(3308534)	C	LTR79	LTR/ERVL	(342)	185	32	2258349
29	5.7	9.1	0.0	chr2	238917644	238917698	(3275831)	+	(GTTTT)n	Simple_repeat	1	60	(0)	2258385
257	31.1	2.6	5.7	chr2	239352057	239352213	(2841316)	+	MIRc	SINE/MIR	30	181	(87)	2258824
190	34.3	3.8	1.9	chr2	239595003	239595106	(2598423)	C	L2	LINE/L2	(643)	2776	2671	2259101
4032	24.3	6.7	5.1	chr2	239672681	239673687	(2519842)	+	Charlie1a	DNA/hAT-Charlie	458	1455	(0)	2259192
541	35.6	5.7	4.6	chr2	239927996	239928410	(2265119)	+	HAL1b	LINE/L1	567	986	(1435)	2259480
369	26.9	10.7	0.6	chr2	240410596	240410763	(1782766)	+	L1MCc	LINE/L1	19	205	(6218)	2260027
182	22.7	0.0	2.2	chr2	240950207	240950251	(1243278)	C	MamRTE1	LINE/RTE-BovB	(2039)	1773	1730	2260535
2823	30.4	13.2	8.5	chr2	241018046	241019840	(1173689)	C	HERVL40-int	LTR/ERVL	(411)	5119	3245	2260592
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
2456	7.1	0.3	0.3	chr2	241216823	241217132	(976397)	C	AluSx1	SINE/Alu	(1)	311	2	2260834
902	26.9	14.7	3.6	chr2	241557994	241558414	(635115)	+	L1M5	LINE/L1	4760	5235	(911)	2261346
12	10.0	9.4	0.0	chr2	241852301	241852332	(341197)	+	(GGCTG)n	Simple_repeat	1	35	(0)	2261787
21	10.9	3.6	5.3	chr2	241852369	241852423	(341106)	+	(GGTCAG)n	Simple_repeat	1	57	(0)	2261788
14	18.4	2.7	0.0	chr20	325309	325345	(64118822)	+	(CCGCC)n	Simple_repeat	1	38	(0)	2262663
12	21.8	2.7	0.0	chr20	325406	325442	(64118725)	+	(GCCCGA)n	Simple_repeat	1	38	(0)	2262664
14	14.0	4.9	2.3	chr20	325566	325606	(64118561)	+	(GCGGCGGA)n	Simple_repeat	1	43	(0)	2262665
12	24.3	1.9	3.8	chr20	381201	381252	(64062915)	+	(CCGGAGG)n	Simple_repeat	1	53	(0)	2262814
2560	19.5	14.0	9.8	chr20	435191	436061	(64008106)	C	MER21A	LTR/ERVL	(17)	914	1	2262936
22661	8.4	2.1	0.2	chr20	468331	471446	(63972721)	C	HERVK22-int	LTR/ERVK	(1502)	5335	2332	2263009
1439	26.4	9.2	1.5	chr20	589377	589834	(63854333)	+	MLT1K	LTR/ERVL-MaLR	3	499	(96)	2263261
14	35.9	0.0	0.0	chr20	653096	653162	(63791005)	+	(GCCCG)n	Simple_repeat	1	67	(0)	2263435
13	14.8	4.0	10.4	chr20	653483	653556	(63790611)	+	G-rich	Low_complexity	1	77	(0)	2263436
16	14.2	0.0	0.0	chr20	653539	653569	(63790598)	+	(GCGGGG)n	Simple_repeat	1	31	(0)	2263437
945	25.6	1.7	1.1	chr20	653689	653915	(63790252)	C	MIR	SINE/MIR	(32)	230	3	2263438
14	20.3	2.0	4.0	chr20	675602	675650	(63768517)	+	(GGCGCGG)n	Simple_repeat	1	50	(0)	2263484
13	29.1	0.0	3.5	chr20	675719	675776	(63768391)	+	(CGGCGG)n	Simple_repeat	1	58	(0)	2263485
832	25.0	4.3	2.6	chr20	706938	707167	(63737000)	+	MIR	SINE/MIR	29	262	(0)	2263561
375	30.2	10.0	2.3	chr20	707383	707511	(63736656)	C	MIR3	SINE/MIR	(27)	181	42	2263562
1087	21.3	1.3	1.2	chr20	897230	897637	(63546530)	+	HERVH-int	LTR/ERV1	1	446	(7267)	2263986
7996	14.7	3.8	6.5	chr20	897725	898335	(63545832)	+	HERVH-int	LTR/ERV1	808	1420	(6293)	2263986
1984	24.1	1.9	0.5	chr20	968232	968657	(63475510)	+	MLT1J	LTR/ERVL-MaLR	74	505	(7)	2264129
1667	25.6	5.2	8.1	chr20	1357647	1358225	(63085942)	C	L1MDa	LINE/L1	(5257)	1290	690	2264864
262	27.8	2.2	3.2	chr20	1358458	1358550	(63085617)	C	L1MDa	LINE/L1	(6191)	449	358	2264864
451	23.6	0.8	1.6	chr20	1690510	1690634	(62753533)	+	Tigger6b	DNA/TcMar-Tigger	1090	1213	(384)	2265426
6624	11.3	4.6	0.0	chr20	1690635	1691587	(62752580)	+	L1PA7	LINE/L1	23	1021	(5440)	2265427
271	24.8	15.3	5.0	chr20	2236179	2236318	(62207849)	+	MER103C	DNA/hAT-Charlie	87	243	(54)	2266551
186	28.2	16.1	2.5	chr20	2236529	2236608	(62207559)	C	L2c	LINE/L2	(4)	3383	3291	2266552
13774	12.9	2.4	5.7	chr20	2426014	2427727	(62016440)	C	L1MC2	LINE/L1	(1500)	4646	2964	2266935
456	32.2	12.8	3.8	chr20	3764372	3764739	(60679428)	+	L2b	LINE/L2	2968	3373	(2)	2269448
22113	10.4	2.0	1.8	chr20	5235770	5242179	(59201988)	C	L1PA7	LINE/L1	(8)	6461	1	2272268
10314	4.2	0.7	1.2	chr20	5638675	5640056	(58804111)	C	SVA_C	Retroposon/SVA	(7)	1377	2	2272927
186	32.4	5.5	0.0	chr20	6701533	6701600	(57742567)	C	L2b	LINE/L2	(7)	3368	3297	2274825
11801	9.1	0.8	1.1	chr20	8158494	8159705	(56284462)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	375	2276834
23143	6.7	0.6	0.3	chr20	9461288	9467437	(54976730)	+	L1PA6	LINE/L1	5	6151	(3)	2278932
15	4.7	0.0	0.0	chr20	9507086	9507107	(54937060)	+	(CGC)n	Simple_repeat	1	22	(0)	2278996
354	29.1	12.4	0.7	chr20	10074211	10074352	(54369815)	+	HAL1ME	LINE/L1	20	180	(2285)	2279935
2190	13.2	2.6	1.3	chr20	10357151	10357526	(54086641)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2280405
1008	16.2	5.9	7.7	chr20	10357527	10357727	(54086440)	+	Ricksha_c	DNA/MULE-MuDR	414	610	(1438)	2280404
250	16.7	0.0	0.0	chr20	10357727	10357768	(54086399)	+	Ricksha_c	DNA/MULE-MuDR	856	897	(1151)	2280406
944	31.5	3.2	2.3	chr20	10803355	10803872	(53640295)	+	L2a	LINE/L2	2625	3140	(235)	2281067
24444	6.3	0.5	0.1	chr20	13593234	13596091	(50848076)	+	L1PA6	LINE/L1	1	2853	(3293)	2285073
240	11.7	1.2	1.7	chr20	13848215	13848619	(50595548)	+	(AGA)n	Simple_repeat	1	410	(0)	2285523
665	28.8	13.5	0.8	chr20	14133415	14133673	(50310494)	C	L2a	LINE/L2	(47)	3379	3083	2285984
1681	26.3	3.2	1.4	chr20	14133741	14134168	(50309999)	+	LTR16A	LTR/ERVL	6	441	(10)	2285985
2073	13.0	0.7	2.3	chr20	14451160	14451460	(49992707)	+	AluSx	SINE/Alu	1	296	(16)	2286447
1525	26.2	2.9	3.9	chr20	14451461	14451802	(49992365)	C	LTR16C	LTR/ERVL	(147)	342	3	2286446
219	29.6	3.6	11.5	chr20	14451980	14452101	(49992066)	C	MIRb	SINE/MIR	(135)	133	22	2286448
1396	15.1	0.0	2.2	chr20	14592423	14592647	(49851520)	C	AluJr	SINE/Alu	(11)	301	82	2286640
1492	20.2	11.7	0.8	chr20	17049391	17049780	(47394387)	+	L1MC4a	LINE/L1	7442	7879	(3)	2290287
635	19.9	6.5	2.1	chr20	17049804	17049993	(47394174)	+	Charlie4a	DNA/hAT-Charlie	310	508	(0)	2290288
1149	19.9	8.5	2.1	chr20	17511420	17511706	(46932461)	+	L1M5	LINE/L1	5293	5599	(580)	2290999
232	40.5	1.4	3.5	chr20	17511713	17511853	(46932314)	+	L3	LINE/CR1	1195	1332	(2767)	2291000
17	17.8	1.7	6.8	chr20	17968482	17968539	(46475628)	+	(GCC)n	Simple_repeat	1	59	(0)	2291818
13	11.2	14.6	0.0	chr20	18138192	18138239	(46305928)	+	(TGCGGC)n	Simple_repeat	1	55	(0)	2292194
7237	13.5	1.4	4.5	chr20	20130305	20131293	(44312874)	C	L1MA4	LINE/L1	(4345)	2220	1239	2295224
11148	14.9	6.2	8.5	chr20	21413066	21413534	(43030633)	C	L1MA5	LINE/L1	(815)	4586	4088	2297055
18289	8.9	0.9	1.6	chr20	21413528	21418677	(43025490)	+	L1PA7	LINE/L1	2	5158	(1303)	2297057
16	16.8	0.0	0.0	chr20	21508704	21508730	(42935437)	+	G-rich	Low_complexity	1	27	(0)	2297197
446	28.2	12.0	6.8	chr20	21544758	21544993	(42899174)	+	L3	LINE/CR1	3331	3580	(519)	2297245
198	31.7	5.7	1.2	chr20	21545000	21545082	(42899085)	C	L2c	LINE/L2	(0)	3387	3301	2297246
304	29.5	8.0	2.6	chr20	21545148	21545300	(42898867)	+	L3	LINE/CR1	3599	3760	(339)	2297245
34	0.0	0.0	0.0	chr20	21713383	21713411	(42730756)	+	(TG)n	Simple_repeat	1	29	(0)	2297491
578	29.7	7.8	6.7	chr20	22690001	22690267	(41753900)	C	LTR33A	LTR/ERVL	(250)	270	1	2298744
2294	8.2	0.0	3.3	chr20	22747685	22747989	(41696178)	+	AluY	SINE/Alu	1	295	(16)	2298814
625	25.4	15.1	6.0	chr20	23355834	23356181	(41087986)	+	MLT1J	LTR/ERVL-MaLR	124	508	(4)	2299605
319	6.9	0.0	15.9	chr20	23489951	23490019	(40954148)	C	MLT2A1	LTR/ERVL	(0)	561	504	2299782
24210	7.4	0.9	0.5	chr20	23615338	23621466	(40822701)	C	L1PA6	LINE/L1	(8)	6146	7	2299928
1520	19.4	7.2	1.7	chr20	23621476	23621883	(40822284)	C	L1MB3	LINE/L1	(569)	5614	5176	2299927
6409	11.9	1.2	1.3	chr20	23982641	23983609	(40460558)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	2300346
1305	19.9	4.0	7.7	chr20	24724737	24725101	(39719066)	C	MER89-int	LTR/ERV1	(3624)	3177	2827	2301251
413	23.0	2.0	0.0	chr20	24725110	24725209	(39718958)	C	MER89-int	LTR/ERV1	(4153)	2648	2547	2301251
332	26.9	10.8	0.9	chr20	25014809	25015012	(39429155)	C	MIRb	SINE/MIR	(21)	247	18	2301589
21	30.9	1.4	0.0	chr20	25867722	25867792	(38576375)	+	GA-rich	Low_complexity	1	72	(0)	2302877
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
406	18.5	1.9	6.8	chr20	26209717	26209878	(38234289)	C	FordPrefect	DNA/hAT-Tip100	(728)	955	802	2303450
189	21.1	8.8	0.0	chr20	26209885	26209936	(38234231)	+	L2a	LINE/L2	3368	3424	(2)	2303448
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
3736	20.0	4.2	2.7	chr20	29525296	29525901	(34918266)	+	L1MA9	LINE/L1	5849	6467	(81)	2304232
25767	3.6	0.3	0.1	chr20	29525907	29531926	(34912241)	+	L1PA2	LINE/L1	124	6155	(0)	2304236
329	16.8	3.6	5.3	chr20	29742048	29742160	(34702007)	C	MER45C	DNA/hAT-Tip100	(355)	598	488	2304486
13	15.3	6.4	4.0	chr20	29742308	29742354	(34701813)	+	G-rich	Low_complexity	1	50	(0)	2304487
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
293	27.7	2.3	4.4	chr20	30400604	30400739	(34043428)	C	MER5A	DNA/hAT-Charlie	(22)	167	35	2304998
573	23.3	5.2	2.0	chr20	30401139	30401287	(34042880)	C	L3	LINE/CR1	(1047)	3052	2899	2304999
776	26.6	8.7	0.0	chr20	30419890	30420207	(34023960)	+	LTR53	LTR/ERVL	169	511	(8)	2305021
8990	11.5	6.0	1.3	chr20	30511699	30513100	(33931067)	C	LSU-rRNA_Hsa	rRNA	(67)	4968	3497	2305100
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
4636	22.9	5.1	7.7	chr20	30625824	30628238	(33815929)	C	L1PA13	LINE/L1	(3745)	3021	486	2305284
26092	5.6	0.4	0.0	chr20	30985456	30991464	(33452703)	+	L1PA3	LINE/L1	124	6155	(0)	2305633
1844	22.2	8.9	6.3	chr20	31927509	31927635	(32516532)	+	L1ME4b	LINE/L1	750	881	(11)	2307205
360	23.8	18.8	0.7	chr20	32470389	32470532	(31973635)	C	L2b	LINE/L2	(0)	3375	3200	2308497
17	24.1	1.3	6.4	chr20	32584067	32584082	(31860085)	+	(CCCCGC)n	Simple_repeat	1	26	(39)	2308734
15	19.9	0.0	0.0	chr20	32584083	32584111	(31860056)	+	(C)n	Simple_repeat	1	29	(0)	2308735
17	24.1	1.3	6.4	chr20	32584112	32584133	(31860034)	+	(CCCCGC)n	Simple_repeat	27	65	(0)	2308734
43	0.0	0.0	0.0	chr20	32584134	32584170	(31859997)	+	(CA)n	Simple_repeat	1	37	(0)	2308736
12	15.9	5.7	0.0	chr20	32762320	32762354	(31681813)	+	G-rich	Low_complexity	1	37	(0)	2309235
12	24.6	0.0	2.5	chr20	32762485	32762524	(31681643)	+	G-rich	Low_complexity	1	40	(0)	2309236
437	20.9	13.5	0.0	chr20	33304679	33304793	(31139374)	+	L2a	LINE/L2	3294	3426	(0)	2310380
23	16.8	0.0	0.0	chr20	33305087	33305126	(31139041)	+	(AC)n	Simple_repeat	1	40	(0)	2310381
514	31.8	2.0	2.4	chr20	33401075	33401325	(31042842)	C	MIR	SINE/MIR	(10)	252	3	2310617
521	20.7	3.9	20.5	chr20	33401624	33401937	(31042230)	+	MER33	DNA/hAT-Charlie	14	267	(57)	2310618
34	0.0	0.0	0.0	chr20	33618642	33618673	(30825494)	+	(TTTG)n	Simple_repeat	1	32	(0)	2311206
2408	13.8	26.5	3.6	chr20	33958572	33958896	(30485271)	+	L1MB7	LINE/L1	5368	5786	(398)	2312007
1790	16.1	0.0	4.3	chr20	33958897	33959200	(30484967)	+	AluJb	SINE/Alu	2	292	(20)	2312011
2642	4.6	0.0	0.3	chr20	33959208	33959511	(30484656)	+	AluY	SINE/Alu	2	304	(7)	2312012
2397	8.8	0.0	2.2	chr20	34020944	34021261	(30422906)	C	AluSz6	SINE/Alu	(0)	312	2	2312153
2105	17.3	3.5	1.3	chr20	34021273	34021658	(30422509)	C	MSTD	LTR/ERVL-MaLR	(1)	395	1	2312154
3630	16.4	3.0	4.7	chr20	34682912	34683347	(29760820)	+	L1MB8	LINE/L1	5486	5936	(242)	2313605
1789	17.0	0.7	2.0	chr20	34683348	34683478	(29760689)	+	AluJb	SINE/Alu	5	132	(180)	2313611
2343	11.5	0.3	0.3	chr20	34683479	34683790	(29760377)	+	AluSx	SINE/Alu	1	312	(0)	2313612
1022	23.3	4.8	1.8	chr20	36388948	36389231	(28054936)	C	L2	LINE/L2	(798)	2621	2329	2317501
2376	8.2	0.0	0.7	chr20	36746774	36747079	(27697088)	C	AluSc	SINE/Alu	(1)	308	5	2318342
1397	9.2	0.0	4.1	chr20	36747126	36747320	(27696847)	C	AluSz	SINE/Alu	(125)	187	1	2318343
4936	29.2	7.5	6.1	chr20	36982754	36983286	(27460881)	+	MER50-int	LTR/ERV1	1266	1879	(5326)	2318947
7708	5.2	0.7	17.0	chr20	37150247	37151650	(27292517)	+	SVA_B	Retroposon/SVA	1	1173	(210)	2319361
180	30.8	3.7	0.0	chr20	38136782	38136859	(26307308)	+	MIR3	SINE/MIR	43	123	(85)	2321467
702	26.8	1.0	5.0	chr20	38137129	38137202	(26306965)	C	MER3	DNA/hAT-Charlie	(0)	209	141	2321468
1953	11.2	10.3	0.0	chr20	38137203	38137480	(26306687)	+	AluSz	SINE/Alu	1	310	(2)	2321469
318	29.0	2.0	2.9	chr20	38304887	38304989	(26139178)	C	MIRb	SINE/MIR	(34)	234	133	2321871
2173	14.1	0.0	0.0	chr20	38701807	38702110	(25742057)	C	AluSx1	SINE/Alu	(2)	310	7	2322690
218	29.8	8.3	2.4	chr20	38702186	38702309	(25741858)	C	L2c	LINE/L2	(162)	3225	3094	2322691
399	29.0	2.0	2.9	chr20	38702465	38702567	(25741600)	+	L2b	LINE/L2	3224	3325	(50)	2322692
18	23.8	0.0	2.0	chr20	38926649	38926699	(25517468)	+	(GCG)n	Simple_repeat	1	51	(0)	2323167
319	34.5	10.3	1.3	chr20	39950897	39951120	(24493047)	+	MIRb	SINE/MIR	30	261	(7)	2324992
1933	16.4	11.4	1.6	chr20	43386882	43387266	(21056901)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2331049
624	21.0	0.7	7.1	chr20	43404817	43404914	(21039253)	C	MLT2F	LTR/ERVL	(566)	97	1	2331081
898	29.1	3.2	1.8	chr20	43404956	43405232	(21038935)	+	ERV3-16A3_LTR	LTR/ERVL	142	422	(0)	2331083
4695	15.1	1.9	2.3	chr20	43476014	43476798	(20967369)	C	MER6	DNA/TcMar-Tigger	(83)	782	1	2331265
2536	6.9	0.3	0.0	chr20	43488987	43489291	(20954876)	C	AluY	SINE/Alu	(4)	307	2	2331287
723	12.2	5.8	6.8	chr20	43489292	43489332	(20954835)	C	MER57A-int	LTR/ERV1	(5495)	692	646	2331267
1058	15.8	0.6	0.6	chr20	43489333	43489504	(20954663)	C	LTR1F1	LTR/ERV1	(0)	729	558	2331288
1267	20.3	32.3	0.7	chr20	43489517	43489810	(20954357)	C	MER57A-int	LTR/ERV1	(5798)	389	3	2331267
245	29.1	10.7	2.9	chr20	43970731	43970957	(20473210)	C	L2b	LINE/L2	(19)	3368	3082	2332371
809	14.7	1.0	0.0	chr20	45302481	45302617	(19141550)	+	FLAM_C	SINE/Alu	15	220	(82)	2335351
11	12.5	0.0	9.3	chr20	45302787	45302800	(19141367)	+	A-rich	Low_complexity	1	13	(0)	2335352
2436	10.3	0.0	0.0	chr20	45302801	45303140	(19141027)	+	AluSz	SINE/Alu	1	312	(0)	2335353
455	27.4	4.1	4.1	chr20	45508003	45508173	(18935994)	+	PrimLTR79	LTR/ERV1	333	503	(0)	2335795
2024	17.1	0.7	0.0	chr20	45508601	45508612	(18935555)	C	AluSz6	SINE/Alu	(0)	312	301	2335796
513	25.3	3.0	8.0	chr20	46041114	46041289	(18402878)	+	MER5B	DNA/hAT-Charlie	1	167	(11)	2336838
21	0.0	7.1	0.0	chr20	46709260	46709287	(17734880)	+	(TG)n	Simple_repeat	1	30	(0)	2338277
12	16.5	4.0	10.3	chr20	46709567	46709641	(17734526)	+	(GGCG)n	Simple_repeat	1	78	(0)	2338278
498	26.2	14.7	7.4	chr20	47248549	47248915	(17195252)	C	L2c	LINE/L2	(0)	3387	2969	2339572
683	13.3	0.0	0.0	chr20	47824967	47825056	(16619111)	C	AluSz6	SINE/Alu	(18)	294	205	2340922
425	26.4	1.9	0.0	chr20	47854448	47854553	(16589614)	C	MER81	DNA/hAT-Blackjack	(3)	111	4	2340987
309	21.2	1.5	0.0	chr20	47854712	47854777	(16589390)	+	LTR67B	LTR/ERVL	41	107	(513)	2340988
1153	21.7	14.5	5.2	chr20	47854897	47855342	(16588825)	C	LTR55	LTR/ERVL?	(10)	538	51	2340989
217	30.8	4.0	1.6	chr20	47989738	47989859	(16454308)	+	L2c	LINE/L2	3026	3150	(237)	2341247
1136	17.8	3.2	0.9	chr20	47989886	47990095	(16454072)	C	MER20	DNA/hAT-Charlie	(3)	216	2	2341248
1936	20.2	6.0	2.5	chr20	48196739	48196931	(16247236)	C	MLT2C2	LTR/ERVL	(269)	195	2	2341635
1251	27.1	9.7	0.7	chr20	48196975	48197413	(16246754)	+	LTR16C	LTR/ERVL	1	483	(6)	2341640
375	32.3	9.7	0.8	chr20	48404263	48404515	(16039652)	C	MLT1J	LTR/ERVL-MaLR	(148)	364	87	2342030
1023	16.2	1.9	1.2	chr20	49207078	49207237	(15236930)	+	FRAM	SINE/Alu	1	161	(15)	2343836
374	29.3	8.4	9.7	chr20	49207274	49207506	(15236661)	+	LTR78	LTR/ERV1	832	1062	(242)	2343837
2118	12.8	0.0	1.6	chr20	49207507	49207818	(15236349)	C	AluSx3	SINE/Alu	(3)	308	2	2343838
903	24.6	6.1	9.1	chr20	50059672	50059908	(14384259)	+	MLT1C	LTR/ERVL-MaLR	188	408	(59)	2345985
2049	3.7	10.3	1.1	chr20	50059925	50060196	(14383971)	C	AluY	SINE/Alu	(11)	300	1	2345987
335	29.8	11.2	7.1	chr20	50794681	50794850	(13649317)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	2347757
2378	9.7	0.0	0.3	chr20	51828112	51828409	(12615758)	+	AluSx	SINE/Alu	1	297	(15)	2350010
408	31.2	5.9	3.7	chr20	51828907	51829297	(12614870)	+	L2a	LINE/L2	2877	3207	(168)	2350011
1374	9.5	25.5	0.0	chr20	53600785	53601006	(10843161)	+	AluSg	SINE/Alu	2	299	(11)	2353829
269	24.6	0.0	0.0	chr20	53601012	53601068	(10843099)	C	MIRc	SINE/MIR	(134)	134	78	2353830
2532	8.0	0.0	0.3	chr20	53601423	53601735	(10842432)	C	AluSq2	SINE/Alu	(0)	313	2	2353831
571	25.5	3.0	0.6	chr20	54180645	54180806	(10263361)	C	L2a	LINE/L2	(21)	3405	3240	2355219
365	13.6	0.0	0.0	chr20	55566772	55566830	(8877337)	+	L1MB4	LINE/L1	5873	5931	(249)	2357542
2577	15.8	2.8	2.2	chr20	55566977	55567430	(8876737)	C	LTR32	LTR/ERVL	(0)	457	1	2357543
1138	29.8	5.7	5.2	chr20	56434071	56434439	(8009728)	+	L1ME4a	LINE/L1	5478	5868	(256)	2359010
361	33.2	5.3	7.4	chr20	56963504	56963734	(7480433)	C	L2b	LINE/L2	(0)	3375	3150	2360270
521	30.6	12.5	2.0	chr20	58154149	58154442	(6289725)	C	MER102c	DNA/hAT-Charlie	(1)	330	2	2362485
1943	16.2	0.7	0.0	chr20	58154798	58155105	(6289062)	C	AluJo	SINE/Alu	(2)	310	1	2362486
13	15.4	0.0	3.2	chr20	58891146	58891176	(5552991)	+	(CCCGG)n	Simple_repeat	1	31	(0)	2363584
37	24.7	3.5	3.4	chr20	58891209	58891351	(5552816)	+	(GCC)n	Simple_repeat	1	148	(0)	2363585
21	32.9	2.8	0.9	chr20	58891362	58891468	(5552699)	+	(CGG)n	Simple_repeat	1	110	(0)	2363586
921	14.3	0.0	0.0	chr20	60714806	60714962	(3729205)	C	AluJb	SINE/Alu	(0)	312	157	2366366
32	26.5	0.0	0.0	chr20	60714964	60715038	(3729129)	+	(TG)n	Simple_repeat	1	75	(0)	2366367
839	13.7	0.0	6.1	chr20	60715062	60715192	(3728975)	C	AluJr	SINE/Alu	(189)	123	1	2366368
298	25.2	12.2	0.0	chr20	60715526	60715676	(3728491)	+	LTR16	LTR/ERVL	242	413	(25)	2366369
12	25.8	0.0	2.3	chr20	61253972	61254014	(3190153)	+	(CCTCCC)n	Simple_repeat	1	43	(0)	2367144
1703	22.7	0.6	0.8	chr20	61281197	61281560	(3162607)	+	MLT1A0	LTR/ERVL-MaLR	2	364	(1)	2367163
1053	23.2	11.0	1.6	chr20	61973766	61974165	(2470002)	+	MLT1C	LTR/ERVL-MaLR	8	400	(67)	2367968
1934	14.3	0.7	3.8	chr20	62155121	62155434	(2288733)	+	AluJb	SINE/Alu	1	304	(8)	2368205
261	28.7	12.3	8.3	chr20	62155435	62155503	(2288664)	C	HAL1	LINE/L1	(1557)	950	879	2368203
2100	13.7	0.0	0.3	chr20	62169497	62169796	(2274371)	+	AluSz	SINE/Alu	1	299	(13)	2368222
13	15.6	2.5	4.9	chr20	62221093	62221132	(2223035)	+	GA-rich	Low_complexity	1	41	(0)	2368304
13	24.8	0.0	0.0	chr20	62221204	62221241	(2222926)	+	(CAGA)n	Simple_repeat	1	38	(0)	2368305
12	23.3	2.0	4.0	chr20	62221303	62221351	(2222816)	+	(CAGCAGG)n	Simple_repeat	1	50	(0)	2368306
13	14.1	0.0	5.7	chr20	62372938	62372972	(2071195)	+	(CCCT)n	Simple_repeat	1	35	(0)	2368471
15	20.8	2.2	2.1	chr20	62372973	62372980	(2071187)	+	(TCTCCC)n	Simple_repeat	4	47	(0)	2368472
314	30.0	11.4	6.9	chr20	62372985	62373366	(2070801)	C	HAL1b	LINE/L1	(1167)	1254	901	2368473
483	33.4	4.7	2.5	chr20	62400915	62401122	(2043045)	C	MIR	SINE/MIR	(46)	216	11	2368513
211	29.1	7.6	1.8	chr20	62504178	62504289	(1939878)	C	MIR3	SINE/MIR	(9)	199	81	2368639
789	26.8	9.7	2.0	chr20	62674653	62674995	(1769172)	+	MLT1A	LTR/ERVL-MaLR	2	373	(1)	2368817
2992	22.5	6.5	7.4	chr20	62693920	62694856	(1749311)	C	MER21C	LTR/ERVL	(6)	932	5	2368840
402	24.0	6.7	5.8	chr20	62758688	62758897	(1685270)	C	MER68	LTR/ERVL	(2)	602	352	2368912
573	27.2	4.4	0.0	chr20	62758933	62759105	(1685062)	C	MER68	LTR/ERVL	(382)	181	1	2368912
567	9.6	2.1	0.0	chr20	62791201	62791294	(1652873)	C	MER53	DNA/hAT	(95)	98	3	2368953
12	16.8	7.5	0.0	chr20	62890887	62890926	(1553241)	+	(GCAGGT)n	Simple_repeat	1	43	(0)	2369070
935	29.7	13.9	2.4	chr20	63020355	63021329	(1422838)	C	L1MEg	LINE/L1	(5215)	1872	767	2369196
12	24.2	1.9	3.8	chr20	63171828	63171879	(1272288)	+	GA-rich	Low_complexity	1	53	(0)	2369337
2464	13.3	10.1	3.0	chr20	63523757	63524083	(920084)	C	LTR10A	LTR/ERV1	(64)	545	213	2369666
3208	10.1	3.2	0.2	chr20	64254837	64255294	(188873)	C	MER4A1	LTR/ERV1	(0)	472	1	2370629
28	0.0	0.0	0.0	chr20	64255724	64255749	(188418)	+	(GGC)n	Simple_repeat	1	26	(0)	2370630
17	0.0	0.0	0.0	chr20	64255876	64255896	(188271)	+	(GCC)n	Simple_repeat	1	21	(0)	2370631
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
605	6.4	0.9	3.6	chr20	64286700	64287633	(156534)	+	(AGGGTT)n	Simple_repeat	1	942	(0)	2370666
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
1977	16.7	10.1	1.1	chr21	8847570	8848997	(37860986)	+	SATR1	Satellite	1	1556	(4)	2374050
1665	19.7	2.8	11.9	chr21	8848131	8849342	(37860641)	C	SATR1	Satellite	(0)	1022	1	2374052
32	26.8	3.0	5.2	chr21	8988027	8988143	(37721840)	+	(CGCC)n	Simple_repeat	3	172	(0)	2374105
5376	0.3	0.0	0.0	chr21	8988172	8988748	(37721235)	+	SSU-rRNA_Hsa	rRNA	1	577	(1292)	2374106
800	10.7	0.6	0.5	chr21	9096388	9100565	(37609418)	+	CER	Satellite	1	4180	(0)	2374227
12218	15.8	5.4	4.3	chr21	9355449	9356047	(37353936)	C	Tigger1	DNA/TcMar-Tigger	(245)	2173	1633	2374457
1850	13.3	3.4	1.1	chr21	9356048	9356332	(37353651)	C	AluSg7	SINE/Alu	(17)	292	1	2374459
12218	15.8	5.4	4.3	chr21	9356333	9357189	(37352794)	C	Tigger1	DNA/TcMar-Tigger	(786)	1632	757	2374457
1683	29.2	6.3	6.8	chr21	9810881	9812152	(36897831)	C	SST1	Satellite/centr	(14)	1549	284	2374881
19	33.9	0.0	1.2	chr21	9812172	9812228	(36897755)	+	(GACA)n	Simple_repeat	1	86	(0)	2374882
18	10.4	0.0	0.0	chr21	9812229	9812259	(36897724)	+	(ACACAC)n	Simple_repeat	1	31	(0)	2374883
1892	29.2	5.1	6.4	chr21	9812264	9813560	(36896423)	C	SST1	Satellite/centr	(1)	1562	284	2374884
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
4607	4.8	0.0	0.0	chr21	10271643	10272208	(36437775)	+	HSATI	Satellite	2	567	(10)	2375350
1723	14.4	0.0	5.1	chr21	10272209	10272500	(36437483)	+	AluSx3	SINE/Alu	13	289	(22)	2375351
471	27.5	6.0	1.2	chr21	10330456	10330628	(36379355)	C	ERVL-E-int	LTR/ERVL	(648)	5019	4838	2375365
3656	21.2	2.5	3.5	chr21	10359038	10359925	(36350058)	C	L1MA8	LINE/L1	(1)	6290	5412	2375399
896	23.6	3.4	6.2	chr21	10359926	10360200	(36349783)	+	MER4B-int	LTR/ERV1	582	848	(5910)	2375400
5929	17.6	6.9	2.4	chr21	10361363	10362990	(36346993)	C	L1MA2	LINE/L1	(205)	6099	4327	2375401
2384	8.4	0.0	0.7	chr21	10362991	10363289	(36346694)	+	AluY	SINE/Alu	2	298	(13)	2375402
1376	6.8	0.0	0.0	chr21	10405143	10405305	(36304678)	+	AluSq4	SINE/Alu	1	163	(148)	2375495
25	18.6	7.6	0.0	chr21	10405379	10405457	(36304526)	+	(CCCCAAT)n	Simple_repeat	1	85	(0)	2375496
15	18.4	4.7	0.0	chr21	10405422	10405464	(36304519)	+	(ATCCGCG)n	Simple_repeat	1	45	(0)	2375497
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
18	13.5	3.7	5.4	chr21	10521905	10521958	(36188025)	+	(CCTC)n	Simple_repeat	1	56	(0)	2375691
14	12.8	2.6	5.1	chr21	10522054	10522091	(36187892)	+	(GCCC)n	Simple_repeat	1	39	(0)	2375692
1233	16.0	4.6	0.9	chr21	14071526	14074479	(32635504)	+	GSATX	Satellite/centr	1	3063	(21)	2377321
299	36.8	4.3	5.3	chr21	14533511	14533814	(32176169)	C	MamRep605	LTR?	(84)	765	465	2377955
5023	3.4	1.6	2.8	chr21	15672194	15672850	(31037133)	C	SVA_A	Retroposon/SVA	(0)	1387	406	2379443
538	24.1	12.9	3.4	chr21	15672838	15673103	(31036880)	+	Helitron1Nb_Mam	RC/Helitron	805	1099	(17)	2379442
12	16.6	0.0	0.0	chr21	17819157	17819183	(28890800)	+	(GTCC)n	Simple_repeat	1	27	(0)	2382241
10590	10.6	0.3	0.6	chr21	17900087	17901723	(28808260)	C	L1PB1	LINE/L1	(4984)	1879	251	2382366
11639	12.2	1.6	1.9	chr21	19679585	19681342	(27028641)	+	HUERS-P3b-int	LTR/ERV1	891	2642	(4776)	2384644
14545	17.9	1.4	1.9	chr21	22120754	22123351	(24586632)	+	HUERS-P2-int	LTR/ERV1	505	3088	(0)	2387904
1516	22.0	18.5	1.6	chr21	22123352	22124004	(24585979)	+	LTR1A1	LTR/ERV1	1	742	(0)	2387904
22258	10.1	1.3	0.7	chr21	22493176	22499632	(24210351)	+	L1PA7	LINE/L1	8	6465	(4)	2388395
9150	12.0	1.3	0.5	chr21	28233752	28235076	(18474907)	+	L1P3	LINE/L1	6	1340	(5121)	2396477
13	8.5	4.0	0.0	chr21	29024590	29024614	(17685369)	+	(GGT)n	Simple_repeat	1	26	(0)	2397622
1585	15.6	9.1	0.4	chr21	31437247	31437516	(15272467)	+	AluJb	SINE/Alu	1	296	(16)	2401337
2204	13.3	12.2	0.5	chr21	31437534	31437910	(15272073)	+	MSTA	LTR/ERVL-MaLR	1	427	(1)	2401338
553	31.4	1.3	4.7	chr21	32853063	32853289	(13856694)	C	L1ME4a	LINE/L1	(295)	5829	5603	2403885
3499	12.9	2.5	2.7	chr21	32853401	32854058	(13855925)	C	LTR28C	LTR/ERV1	(2)	634	1	2403887
18237	17.1	3.0	3.7	chr21	32854061	32857329	(13852654)	C	LTR25-int	LTR/ERV1	(1)	7187	3914	2403887
233	35.0	8.3	2.2	chr21	33068012	33068192	(13641791)	+	MIRc	SINE/MIR	38	230	(38)	2404249
852	21.1	14.4	0.0	chr21	33346872	33347103	(13362880)	C	MLT1E	LTR/ERVL-MaLR	(2)	651	381	2404763
2364	10.1	0.0	0.0	chr21	33347132	33347429	(13362554)	C	AluSx	SINE/Alu	(14)	298	1	2404764
279	24.7	4.0	0.0	chr21	34779413	34779485	(11930498)	+	L2a	LINE/L2	2481	2556	(863)	2407167
811	13.2	15.6	0.7	chr21	34779507	34779659	(11930324)	+	MSTA	LTR/ERVL-MaLR	1	180	(248)	2407168
975	17.0	0.6	2.4	chr21	34779660	34779865	(11930118)	C	AluJo	SINE/Alu	(0)	312	120	2407169
13369	8.8	0.6	2.3	chr21	36314834	36317138	(10392845)	C	L1PA7	LINE/L1	(4183)	2316	7	2409599
242	23.3	4.5	18.1	chr21	36317216	36317230	(10392753)	C	L1M8	LINE/L1	(2900)	91	79	2409586
1340	13.2	17.9	3.9	chr21	36317231	36317488	(10392495)	C	AluJb	SINE/Alu	(10)	302	1	2409600
490	29.4	8.6	0.4	chr21	36493389	36493634	(10216349)	+	LTR81A	LTR/Gypsy	171	438	(912)	2409992
26262	5.3	0.6	0.3	chr21	36616545	36622673	(10087310)	+	L1PA5	LINE/L1	11	6154	(0)	2410204
15	21.1	0.0	0.0	chr21	36693758	36693786	(10016197)	+	A-rich	Low_complexity	1	29	(0)	2410353
2130	11.9	1.3	0.0	chr21	37579027	37579320	(9130663)	C	AluSc	SINE/Alu	(10)	299	2	2411823
1274	28.2	4.6	5.9	chr21	37579321	37579542	(9130441)	C	L1MEf	LINE/L1	(5480)	1557	1119	2411822
4433	18.2	1.6	2.1	chr21	37671003	37671822	(9038161)	+	MER21B	LTR/ERVL	1	816	(52)	2411952
211	35.2	2.1	1.1	chr21	38713706	38713797	(7996186)	C	MIR3	SINE/MIR	(7)	201	109	2413372
2081	17.9	0.7	3.1	chr21	38912357	38912777	(7797206)	+	L1MB7	LINE/L1	5751	6161	(23)	2413691
2506	5.4	0.3	0.3	chr21	38924212	38924507	(7785476)	+	AluY	SINE/Alu	1	296	(15)	2413708
1841	7.3	1.1	1.9	chr21	40577282	40577547	(6132436)	C	HERVS71-int	LTR/ERV1	(8714)	264	1	2416240
4061	5.1	5.5	0.0	chr21	40577548	40578074	(6131909)	C	LTR6B	LTR/ERV1	(0)	558	1	2416240
318	21.8	13.3	0.0	chr21	41361572	41361649	(5348334)	C	MER3	DNA/hAT-Charlie	(22)	187	98	2417320
355	23.6	4.0	2.7	chr21	41361729	41361876	(5348107)	+	MER5A	DNA/hAT-Charlie	39	188	(1)	2417321
604	20.3	2.1	1.2	chr21	41650881	41651035	(5058948)	+	MER45A	DNA/hAT-Tip100	13	167	(11)	2417803
1444	23.3	5.2	0.0	chr21	41692415	41692758	(5017225)	C	MER89	LTR/ERV1	(0)	559	197	2417871
442	17.6	5.2	1.2	chr21	41692777	41692902	(5017081)	C	MER34A	LTR/ERV1	(0)	571	421	2417872
3125	7.5	9.7	0.5	chr21	42329333	42329773	(4380210)	+	LTR19A	LTR/ERV1	1	486	(0)	2418730
301	30.6	5.3	0.0	chr21	42361352	42361459	(4348524)	+	LTR79	LTR/ERVL	108	221	(306)	2418777
537	27.1	9.2	0.0	chr21	42575135	42575311	(4134672)	+	MIR	SINE/MIR	6	200	(62)	2419048
2443	30.0	5.5	5.3	chr21	42599726	42600906	(4109077)	C	ERV3-16A3_I-int	LTR/ERVL	(1885)	3341	2159	2419067
427	15.4	2.1	2.1	chr21	42600909	42601001	(4108982)	C	MER4B-int	LTR/ERV1	(2138)	4620	4528	2419069
32	2.9	0.0	0.0	chr21	43718829	43718863	(2991120)	+	(GCGGGGC)n	Simple_repeat	1	35	(0)	2420694
19	13.0	0.0	0.0	chr21	43718877	43718910	(2991073)	+	(AATG)n	Simple_repeat	1	34	(0)	2420695
26	3.1	3.0	0.0	chr21	43719206	43719238	(2990745)	+	(GAGCCC)n	Simple_repeat	1	34	(0)	2420696
13	19.5	0.0	2.7	chr21	43719258	43719294	(2990689)	+	(CCCGG)n	Simple_repeat	1	37	(0)	2420697
1776	14.5	0.3	1.7	chr21	44939420	44939708	(1770275)	+	AluJr	SINE/Alu	1	285	(27)	2422348
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
20	22.7	0.0	3.3	chr21	44940122	44940181	(1769802)	+	(CCGGCC)n	Simple_repeat	1	60	(0)	2422350
223	28.7	7.3	2.9	chr21	44983608	44983711	(1726272)	C	MIR3	SINE/MIR	(76)	132	24	2422380
142	27.3	3.3	1.0	chr21	44983933	44984414	(1725569)	+	(CA)n	Simple_repeat	1	498	(0)	2422381
3661	13.3	3.0	2.9	chr21	45014231	45014456	(1695527)	C	MER41E	LTR/ERV1	(359)	236	1	2422407
302	30.9	6.8	3.8	chr21	45460014	45460171	(1249812)	C	MIR	SINE/MIR	(85)	177	15	2422868
23976	9.5	0.8	0.8	chr21	46578334	46582758	(127225)	C	L1PA10	LINE/L1	(1886)	4445	15	2424153
6545	17.5	7.9	5.0	chr21	46582785	46583537	(126446)	+	L1M4b	LINE/L1	3009	3679	(3327)	2424152
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1249	21.0	6.5	1.2	chr22	11896731	11897053	(38921415)	C	L1MB8	LINE/L1	(5)	6173	5833	2425507
2301	14.0	7.0	0.5	chr22	11897054	11897465	(38921003)	C	MER61C	LTR/ERV1	(0)	428	4	2425508
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
5492	25.2	7.0	0.9	chr22	11917727	11919230	(38899238)	+	MSTA-int	LTR/ERVL-MaLR	28	1631	(0)	2425534
24888	7.0	0.5	0.1	chr22	12031367	12037491	(38780977)	C	L1PA4	LINE/L1	(3)	6325	176	2425613
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
21981	7.0	1.2	0.8	chr22	12199087	12201874	(38616594)	C	HERVK9-int	LTR/ERVK	(3223)	2798	1	2425813
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
943	28.6	2.8	4.3	chr22	17019560	17020068	(33798400)	C	MER4B-int	LTR/ERV1	(6359)	1254	582	2428082
3704	20.0	3.4	3.7	chr22	17020069	17020959	(33797509)	+	L1MA6	LINE/L1	5412	6299	(1)	2428083
665	13.6	6.1	0.8	chr22	17171204	17171328	(33647140)	C	AluJo	SINE/Alu	(179)	133	2	2428366
389	29.6	3.1	0.0	chr22	17172153	17172277	(33646191)	+	MIR3	SINE/MIR	77	205	(3)	2428367
2091	8.8	6.9	0.0	chr22	18149659	18149942	(32668526)	+	AluSx	SINE/Alu	1	305	(7)	2430308
4341	4.4	0.2	0.0	chr22	18890645	18891207	(31927261)	C	HSATI	Satellite	(10)	567	4	2431162
36	2.7	13.3	0.0	chr22	18891210	18891284	(31927184)	+	(AT)n	Simple_repeat	1	85	(0)	2431163
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
218	32.1	6.7	0.0	chr22	19056698	19056781	(31761687)	C	MIRc	SINE/MIR	(65)	203	114	2431366
16	16.2	2.3	2.3	chr22	19941706	19941753	(30876715)	+	(GCGCCGC)n	Simple_repeat	1	48	(0)	2432712
12	20.7	0.0	2.9	chr22	19941852	19941886	(30876582)	+	(GCCGG)n	Simple_repeat	1	35	(0)	2432713
2244	11.3	0.3	0.3	chr22	19954449	19954750	(30863718)	C	AluSq2	SINE/Alu	(9)	304	3	2432740
432	28.8	0.0	3.1	chr22	19954751	19954800	(30863668)	C	MER58A	DNA/hAT-Charlie	(141)	83	37	2432739
831	18.9	5.4	0.0	chr22	19955008	19955166	(30863302)	C	AluJr	SINE/Alu	(8)	304	137	2432741
184	35.1	9.3	2.4	chr22	20259772	20259940	(30558528)	+	L2b	LINE/L2	3193	3374	(1)	2433055
996	28.1	14.3	7.1	chr22	20528624	20529173	(30289295)	C	HAL1	LINE/L1	(1837)	670	101	2433497
9489	5.9	1.6	7.9	chr22	21847028	21848451	(28970017)	+	SVA_B	Retroposon/SVA	52	1383	(0)	2436037
3569	23.6	9.6	4.9	chr22	21889347	21889906	(28928562)	+	L1MB4	LINE/L1	442	1070	(5576)	2436143
2258	7.2	3.3	0.3	chr22	21889907	21890198	(28928270)	+	AluY	SINE/Alu	1	301	(10)	2436148
3569	23.6	9.6	4.9	chr22	21890199	21891019	(28927449)	+	L1MB4	LINE/L1	1071	1895	(4751)	2436143
12	34.9	0.0	1.6	chr22	22118289	22118351	(28700117)	+	(CCCG)n	Simple_repeat	1	63	(0)	2436497
250	26.9	5.8	3.3	chr22	23037476	23037625	(27780843)	C	MIR3	SINE/MIR	(21)	187	34	2437692
669	22.3	8.2	2.2	chr22	23733130	23733358	(27085110)	C	L1ME3C	LINE/L1	(284)	5839	5596	2438846
2203	12.3	0.0	0.7	chr22	23733538	23733838	(27084630)	C	AluSq2	SINE/Alu	(14)	299	1	2438847
24	10.6	0.0	2.3	chr22	23839730	23839772	(26978696)	+	(CCTC)n	Simple_repeat	1	43	(0)	2439052
868	17.6	1.7	1.2	chr22	24230632	24230803	(26587665)	+	MER65A	LTR/ERV1	273	445	(0)	2439699
767	20.6	0.6	1.2	chr22	24230804	24230965	(26587503)	+	MLT1C	LTR/ERVL-MaLR	305	465	(2)	2439695
355	23.5	10.1	0.0	chr22	24550211	24550308	(26268160)	C	L2a	LINE/L2	(2)	3424	3316	2440228
188	11.8	0.0	0.0	chr22	24550384	24550417	(26268051)	C	L2a	LINE/L2	(365)	3061	3028	2440229
6569	12.4	1.2	1.0	chr22	24630446	24631411	(26187057)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2440379
12	8.3	3.6	3.5	chr22	24807052	24807079	(26011389)	+	(CACCC)n	Simple_repeat	1	29	(0)	2440687
1101	22.9	0.3	7.7	chr22	25173651	25173976	(25644492)	C	MER33	DNA/hAT-Charlie	(22)	302	1	2441657
397	29.8	0.0	0.0	chr22	25174602	25174715	(25643753)	+	MIRb	SINE/MIR	27	140	(128)	2441658
245	26.1	13.6	7.7	chr22	26428441	26428764	(24389704)	+	L2c	LINE/L2	3030	3375	(0)	2444330
17756	7.4	1.2	0.0	chr22	27373053	27375745	(23442723)	+	L1P2	LINE/L1	1	2710	(3436)	2446541
10589	9.3	1.7	0.1	chr22	28133243	28134796	(22683672)	+	L1P1	LINE/L1	7	1585	(4570)	2448035
416	28.7	23.7	0.0	chr22	28152029	28152192	(22666276)	+	MIRb	SINE/MIR	46	260	(8)	2448062
407	27.1	14.2	0.2	chr22	28152427	28152616	(22665852)	+	MIRc	SINE/MIR	1	214	(54)	2448063
20799	16.5	2.3	1.1	chr22	28505305	28508287	(22310181)	+	L1PA11	LINE/L1	10	3797	(3784)	2448610
854	7.5	0.0	0.0	chr22	28811757	28811863	(22006605)	C	AluSx	SINE/Alu	(191)	121	15	2449263
1017	20.4	0.0	3.3	chr22	28811870	28812082	(22006386)	C	L1MD3	LINE/L1	(34)	7961	7756	2449264
694	12.7	1.8	1.8	chr22	28917575	28917684	(21900784)	+	FLAM_A	SINE/Alu	20	129	(13)	2449558
306	33.2	3.5	4.0	chr22	29225508	29225708	(21592760)	C	MIRb	SINE/MIR	(16)	252	53	2450153
2161	9.7	4.5	0.0	chr22	29305641	29305938	(21512530)	+	AluSx1	SINE/Alu	1	312	(0)	2450300
13	14.0	0.0	5.7	chr22	29306273	29306307	(21512161)	+	(GCCCA)n	Simple_repeat	1	35	(0)	2450301
6419	7.1	1.0	3.5	chr22	29551786	29553257	(21265211)	+	SVA_C	Retroposon/SVA	29	1383	(1)	2450823
14	23.7	3.5	3.3	chr22	29883118	29883175	(20935293)	+	(GCGC)n	Simple_repeat	1	60	(0)	2451570
13	0.0	0.0	0.0	chr22	29883217	29883233	(20935235)	+	(GGC)n	Simple_repeat	1	17	(0)	2451571
4169	18.4	5.4	2.2	chr22	30058331	30059754	(20758714)	+	L1M4c	LINE/L1	1637	3187	(3189)	2451866
5431	3.7	1.1	0.4	chr22	30059760	30060469	(20757999)	+	SVA_C	Retroposon/SVA	670	1384	(0)	2451870
16	7.8	0.0	3.5	chr22	30802854	30802882	(20015586)	+	(GGCG)n	Simple_repeat	1	29	(0)	2453437
21	17.4	2.2	0.0	chr22	30803073	30803118	(20015350)	+	(GCG)n	Simple_repeat	1	47	(0)	2453438
16	6.9	6.5	0.0	chr22	31107917	31107947	(19710521)	+	(AAGA)n	Simple_repeat	1	33	(0)	2454028
2207	12.0	0.0	4.3	chr22	31272051	31272374	(19546094)	C	AluSx	SINE/Alu	(2)	310	1	2454414
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
42	0.0	0.0	0.0	chr22	33203067	33203102	(17615366)	+	(CT)n	Simple_repeat	1	36	(0)	2458560
21	0.0	0.0	0.0	chr22	33203103	33203125	(17615343)	+	(GT)n	Simple_repeat	1	23	(0)	2458561
25	16.2	0.0	0.0	chr22	33203128	33203175	(17615293)	+	GA-rich	Low_complexity	1	48	(0)	2458562
23331	9.4	1.8	1.7	chr22	33640505	33646609	(17171859)	+	L1PA8	LINE/L1	374	6486	(1)	2459492
592	31.2	6.9	5.1	chr22	33957075	33957445	(16861023)	+	L2a	LINE/L2	794	1171	(2248)	2460115
2284	16.8	5.5	0.0	chr22	33957447	33957840	(16860628)	+	MSTB	LTR/ERVL-MaLR	1	417	(9)	2460118
460	31.3	3.5	0.0	chr22	35353120	35353282	(15465186)	+	MIR3	SINE/MIR	25	193	(15)	2462761
2450	9.6	0.0	0.0	chr22	35353681	35353992	(15464476)	+	AluSq	SINE/Alu	2	313	(0)	2462762
324	35.0	2.4	5.9	chr22	35600224	35600442	(15218026)	C	Charlie15a	DNA/hAT-Charlie	(2)	222	12	2463401
199	36.0	1.1	1.1	chr22	35907033	35907122	(14911346)	+	L3	LINE/CR1	3982	4071	(28)	2463950
1137	25.0	9.3	5.6	chr22	35907126	35907608	(14910860)	+	MLT1J	LTR/ERVL-MaLR	5	507	(5)	2463951
755	24.8	5.4	3.0	chr22	36214917	36215149	(14603319)	C	HERV35I-int	LTR/ERV1	(3974)	2944	2706	2464592
1740	21.6	20.7	2.1	chr22	36215160	36215777	(14602691)	+	MER4CL34	LTR/ERV1	3	765	(0)	2464593
2182	8.5	3.0	1.7	chr22	36578080	36578372	(14240096)	+	AluSz	SINE/Alu	1	297	(15)	2465392
276	22.8	14.1	0.0	chr22	36578487	36578565	(14239903)	C	MIRc	SINE/MIR	(143)	125	34	2465393
908	29.1	6.8	4.4	chr22	36976999	36977547	(13840921)	+	LTR78B	LTR/ERV1	194	756	(540)	2466229
554	16.0	14.5	0.0	chr22	36977670	36977769	(13840699)	+	MER41B	LTR/ERV1	1	117	(517)	2466230
877	15.2	12.3	0.0	chr22	36977770	36977940	(13840528)	+	AluJr	SINE/Alu	117	311	(1)	2466231
1993	23.2	8.2	0.8	chr22	37077436	37077917	(13740551)	+	Charlie1b	DNA/hAT-Charlie	1	521	(2)	2466462
435	22.2	12.2	4.4	chr22	37325261	37325456	(13493012)	C	MIRb	SINE/MIR	(52)	216	4	2466986
405	27.7	5.4	2.1	chr22	37388679	37388822	(13429646)	+	MIRc	SINE/MIR	44	192	(76)	2467108
233	24.7	6.6	3.8	chr22	37389028	37389161	(13429307)	+	MIRc	SINE/MIR	88	227	(3)	2467109
17	14.2	3.2	0.0	chr22	37389188	37389218	(13429250)	+	GA-rich	Low_complexity	1	32	(0)	2467110
297	21.0	49.3	3.7	chr22	37473591	37473861	(13344607)	+	MLT1K	LTR/ERVL-MaLR	164	566	(29)	2467316
236	26.5	2.0	6.7	chr22	37566835	37566939	(13251529)	C	MIRc	SINE/MIR	(120)	148	49	2467541
14	21.4	5.2	3.3	chr22	37677439	37677496	(13140972)	+	(TCAT)n	Simple_repeat	1	61	(0)	2467800
235	25.9	8.6	0.0	chr22	37677520	37677612	(13140856)	+	MIRc	SINE/MIR	81	198	(70)	2467801
12	17.4	7.0	4.9	chr22	37906164	37906220	(12912248)	+	(GGC)n	Simple_repeat	1	61	(0)	2468379
28	19.3	5.5	4.3	chr22	37906307	37906415	(12912053)	+	(CGGAGC)n	Simple_repeat	1	115	(0)	2468380
276	31.5	1.8	2.7	chr22	38029206	38029316	(12789152)	C	MIR3	SINE/MIR	(2)	206	97	2468652
351	34.6	12.3	3.0	chr22	38029337	38029631	(12788837)	C	L2c	LINE/L2	(1)	3386	3061	2468653
523	27.3	1.8	1.3	chr22	38234763	38234933	(12583535)	+	MIR	SINE/MIR	1	175	(93)	2469073
17	12.2	4.0	5.8	chr22	38398524	38398573	(12419895)	+	GA-rich	Low_complexity	1	52	(0)	2469395
10109	4.1	3.4	1.3	chr22	38409401	38410725	(12407743)	C	SVA_B	Retroposon/SVA	(2)	1381	28	2469422
1843	14.2	0.0	4.6	chr22	38511302	38511604	(12306864)	+	AluJo	SINE/Alu	6	294	(18)	2469650
928	17.2	0.7	0.0	chr22	38511621	38511765	(12306703)	C	AluJr	SINE/Alu	(31)	281	136	2469651
809	27.1	7.1	11.6	chr22	38511766	38511970	(12306498)	+	MLT1J	LTR/ERVL-MaLR	40	253	(259)	2469649
21	25.2	2.1	5.2	chr22	39152445	39152538	(11665930)	+	G-rich	Low_complexity	1	96	(0)	2471004
21	15.9	4.1	0.0	chr22	39152560	39152608	(11665860)	+	(CGCGCA)n	Simple_repeat	1	51	(0)	2471005
15	12.2	5.6	0.0	chr22	39152802	39152837	(11665631)	+	G-rich	Low_complexity	1	38	(0)	2471006
673	27.2	11.4	9.8	chr22	39341110	39341754	(11476714)	C	L1MEi	LINE/L1	(1505)	707	53	2471425
323	16.0	16.1	0.0	chr22	39446010	39446103	(11372365)	C	MLT1H	LTR/ERVL-MaLR	(335)	214	103	2471666
1531	26.1	6.2	4.2	chr22	39693172	39693723	(11124745)	C	L1MB3	LINE/L1	(80)	6103	5540	2472174
687	19.4	7.1	4.6	chr22	40432995	40433145	(10385323)	+	MER21C	LTR/ERVL	432	586	(352)	2473541
1857	13.9	5.9	0.7	chr22	40722551	40722837	(10095631)	C	AluJb	SINE/Alu	(9)	303	1	2474201
360	23.5	16.1	7.5	chr22	40722838	40722908	(10095560)	C	MER5A1	DNA/hAT-Charlie	(90)	76	6	2474199
4881	19.2	3.3	5.4	chr22	40748226	40749325	(10069143)	+	LTR27E	LTR/ERV1	1	1077	(0)	2474266
3940	11.4	3.1	1.6	chr22	40749326	40749915	(10068553)	+	LTR24C	LTR/ERV1	31	635	(0)	2474265
26	20.5	0.0	0.0	chr22	41413576	41413631	(9404837)	+	GA-rich	Low_complexity	1	56	(0)	2475855
2183	3.4	0.4	0.4	chr22	42565062	42565327	(8253141)	C	7SK	RNA	(62)	269	4	2478388
7155	4.8	1.2	10.0	chr22	42607120	42608264	(8210204)	+	SVA_B	Retroposon/SVA	34	1076	(307)	2478487
14	27.7	1.6	3.1	chr22	42856909	42856972	(7961496)	+	(CCCCG)n	Simple_repeat	1	65	(0)	2479091
20	15.5	2.3	0.0	chr22	42856945	42856987	(7961481)	+	(GCCCG)n	Simple_repeat	1	44	(0)	2479092
2274	8.5	2.0	0.3	chr22	42857684	42857978	(7960490)	C	AluSx	SINE/Alu	(11)	301	2	2479093
37	19.1	2.5	0.0	chr22	42974776	42974856	(7843612)	+	GA-rich	Low_complexity	1	83	(0)	2479288
194	27.5	0.0	3.8	chr22	42974912	42974964	(7843504)	C	Tigger19b	DNA/TcMar-Tigger	(295)	255	205	2479289
327	27.7	7.1	11.4	chr22	42975278	42975336	(7843132)	+	L1ME3F	LINE/L1	5773	5824	(299)	2479290
705	11.6	15.2	0.0	chr22	42975337	42975448	(7843020)	+	AluJo	SINE/Alu	1	132	(180)	2479291
255	33.3	4.2	4.2	chr22	43041092	43041210	(7777258)	C	MIR3	SINE/MIR	(94)	136	18	2479438
2289	12.2	0.0	0.3	chr22	43094825	43095136	(7723332)	+	AluSz6	SINE/Alu	2	312	(0)	2479575
284	28.3	6.2	3.2	chr22	43095463	43095586	(7722882)	+	MIRb	SINE/MIR	110	237	(31)	2479576
184	32.8	0.0	0.0	chr22	43110225	43110282	(7708186)	+	MIRb	SINE/MIR	121	178	(90)	2479618
14	4.3	0.0	7.1	chr22	43203769	43203796	(7614672)	+	(GGGA)n	Simple_repeat	1	28	(0)	2479820
2118	12.0	1.3	0.0	chr22	43204299	43204598	(7613870)	C	AluSx	SINE/Alu	(8)	304	1	2479821
15	17.6	0.0	4.8	chr22	43411569	43411614	(7406854)	+	(CCCGG)n	Simple_repeat	1	43	(0)	2480191
18	20.5	7.9	3.1	chr22	43411753	43411841	(7406627)	+	(CCGAGG)n	Simple_repeat	1	96	(0)	2480192
9374	18.8	4.4	2.4	chr22	43702277	43706163	(7112305)	+	L1M3b	LINE/L1	1218	4869	(2693)	2480649
1412	25.4	4.4	1.2	chr22	44263522	44263939	(6554529)	+	MLT1D	LTR/ERVL-MaLR	74	505	(0)	2481647
569	24.3	1.3	0.7	chr22	44263940	44264092	(6554376)	+	L1M5	LINE/L1	5646	5799	(363)	2481648
242	18.6	9.2	0.0	chr22	44264226	44264284	(6554184)	C	MIRc	SINE/MIR	(89)	179	115	2481649
211	27.6	20.6	1.6	chr22	44488351	44488475	(6329993)	+	MIRb	SINE/MIR	93	247	(21)	2482049
818	18.6	0.0	0.0	chr22	44488616	44488739	(6329729)	+	AluJo	SINE/Alu	2	125	(187)	2482050
485	23.1	2.9	9.5	chr22	44589459	44589606	(6228862)	+	MLT1I	LTR/ERVL-MaLR	34	171	(240)	2482249
302	22.4	1.5	0.0	chr22	44589602	44589668	(6228800)	+	MLT1I	LTR/ERVL-MaLR	344	411	(0)	2482249
636	22.6	21.0	0.4	chr22	44705078	44705308	(6113160)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	177	2482473
2351	10.6	0.9	0.3	chr22	44705314	44705624	(6112844)	C	AluSq2	SINE/Alu	(0)	313	1	2482474
27	8.3	0.0	0.0	chr22	45199771	45199809	(5618659)	+	(TGAA)n	Simple_repeat	1	39	(0)	2483430
3207	26.0	10.6	4.7	chr22	45427935	45428813	(5389655)	C	L2a	LINE/L2	(1128)	2291	1331	2483903
1352	21.8	10.6	3.0	chr22	45606657	45607093	(5211375)	+	MER21C	LTR/ERVL	9	581	(357)	2484238
2793	11.7	1.9	1.6	chr22	46203517	46203943	(4614525)	C	MER61C	LTR/ERV1	(0)	428	1	2485184
3394	21.6	4.4	5.6	chr22	46203944	46204858	(4613610)	C	L1ME1	LINE/L1	(124)	6228	5338	2485183
1590	20.6	9.5	3.2	chr22	46335153	46335459	(4483009)	C	MER4B	LTR/ERV1	(263)	347	2	2485393
1280	23.7	6.5	0.3	chr22	46426306	46426622	(4391846)	C	MLT1A0	LTR/ERVL-MaLR	(2)	363	26	2485502
1373	21.8	6.9	3.4	chr22	46426623	46426973	(4391495)	+	MLT1A0	LTR/ERVL-MaLR	1	364	(1)	2485503
2518	6.6	0.0	0.0	chr22	46563070	46563372	(4255096)	+	AluSx3	SINE/Alu	1	303	(8)	2485729
11	25.3	0.0	4.3	chr22	46737703	46737748	(4080720)	+	(CGCCCCG)n	Simple_repeat	1	46	(0)	2485974
15	17.7	2.6	0.0	chr22	46738006	46738043	(4080425)	+	G-rich	Low_complexity	1	39	(0)	2485975
28	3.3	0.0	0.0	chr22	46738231	46738261	(4080207)	+	(CGGGCGG)n	Simple_repeat	1	31	(0)	2485976
530	29.4	14.4	1.4	chr22	46742446	46742662	(4075806)	C	MIRb	SINE/MIR	(13)	255	6	2485982
793	15.8	0.0	0.3	chr22	47536084	47536240	(3282228)	C	L1M3	LINE/L1	(496)	5804	5652	2486998
331	27.7	8.3	2.4	chr22	48558990	48559159	(2259309)	+	MLT1A	LTR/ERVL-MaLR	97	277	(97)	2488384
11	18.2	2.4	4.8	chr22	48559315	48559355	(2259113)	+	(GCTCTGA)n	Simple_repeat	1	42	(0)	2488385
20	28.5	1.2	2.5	chr22	49983630	49983709	(834759)	+	(CCCCGC)n	Simple_repeat	1	81	(0)	2490026
961	5.1	0.0	0.8	chr22	49984072	49984189	(834279)	C	AluSz	SINE/Alu	(195)	117	1	2490027
8363	16.9	3.6	3.2	chr22	49984201	49984571	(833897)	C	L1M4	LINE/L1	(695)	5479	5109	2490028
370	30.7	9.8	0.9	chr22	50399948	50400180	(418288)	C	LTR79	LTR/ERVL	(46)	481	226	2490621
235	30.8	6.5	5.5	chr22	50441838	50442019	(376449)	C	L2b	LINE/L2	(216)	3159	2976	2490686
1005	12.6	13.0	1.9	chr22	50480301	50480511	(337957)	+	7SK	RNA	2	239	(92)	2490729
29	22.8	4.4	5.0	chr22	50481615	50481749	(336719)	+	(CGCCCG)n	Simple_repeat	1	141	(0)	2490731
16	0.0	0.0	0.0	chr22	50530398	50530415	(288053)	+	(AG)n	Simple_repeat	1	18	(0)	2490814
299	31.4	6.8	2.2	chr22	50598411	50598551	(219917)	C	L2b	LINE/L2	(0)	3387	3229	2490932
1074	15.2	25.2	0.5	chr22	50598552	50598774	(219694)	C	AluSz	SINE/Alu	(15)	297	1	2490933
257	34.0	3.8	7.4	chr22	50598775	50598848	(219620)	C	L2b	LINE/L2	(132)	3255	3181	2490932
12	23.6	0.0	0.0	chr3	3126957	3126991	(195168568)	+	(GGCGGC)n	Simple_repeat	1	35	(0)	2496960
15175	9.0	1.8	0.7	chr3	4242066	4246393	(194049166)	C	L1P2	LINE/L1	(1784)	4362	6	2498684
2324	11.2	0.7	0.0	chr3	4246395	4246699	(194048860)	C	AluSg	SINE/Alu	(3)	307	1	2498685
26601	2.2	0.1	0.0	chr3	4253249	4259276	(194036283)	+	L1PA2	LINE/L1	124	6155	(0)	2498693
21	0.0	0.0	0.0	chr3	4352732	4352754	(193942805)	+	(A)n	Simple_repeat	1	23	(0)	2498851
314	26.8	17.0	1.4	chr3	4352849	4352992	(193942567)	C	L3b	LINE/CR1	(198)	5034	4864	2498852
520	21.9	0.9	0.0	chr3	4352999	4353112	(193942447)	C	Charlie1a	DNA/hAT-Charlie	(1)	1454	1340	2498853
369	4.3	0.0	0.0	chr3	4743005	4743051	(193552508)	C	MADE1	DNA/TcMar-Mariner	(0)	80	34	2499525
569	20.8	0.2	7.0	chr3	8565227	8565399	(189730160)	C	MIR	SINE/MIR	(67)	195	35	2505592
702	21.9	2.7	0.0	chr3	9152035	9152180	(189143379)	+	L2a	LINE/L2	3270	3419	(7)	2506610
253	28.6	5.9	2.6	chr3	9152221	9152335	(189143224)	+	MLT1M	LTR/ERVL-MaLR	58	176	(496)	2506611
27	8.7	0.0	0.0	chr3	9152388	9152424	(189143135)	+	(TC)n	Simple_repeat	1	37	(0)	2506612
418	30.3	10.8	1.3	chr3	9302034	9302267	(188993292)	C	MIRb	SINE/MIR	(6)	262	4	2506929
2089	14.8	0.0	0.0	chr3	9546992	9547288	(188748271)	C	AluJr	SINE/Alu	(15)	297	1	2507411
517	29.6	10.4	3.3	chr3	9547289	9547323	(188748236)	C	MIR	SINE/MIR	(229)	33	3	2507410
284	26.9	37.0	1.8	chr3	9547476	9547655	(188747904)	+	MIRc	SINE/MIR	16	259	(9)	2507412
2394	5.4	0.0	0.0	chr3	9863850	9864143	(188431416)	+	AluY	SINE/Alu	1	294	(17)	2508111
207	27.4	1.9	0.0	chr3	9902443	9902493	(188393066)	+	L2c	LINE/L2	3312	3363	(24)	2508214
14	13.8	0.0	5.6	chr3	9902799	9902834	(188392725)	+	G-rich	Low_complexity	1	36	(0)	2508215
264	32.3	13.2	1.3	chr3	10850649	10850874	(187444685)	C	L2b	LINE/L2	(430)	2989	2733	2510240
277	32.7	3.0	5.5	chr3	11028520	11028685	(187266874)	+	MIRb	SINE/MIR	73	244	(24)	2510595
456	30.7	3.2	0.7	chr3	11028969	11029122	(187266437)	C	MIR3	SINE/MIR	(14)	194	37	2510596
468	25.6	5.9	2.2	chr3	11126560	11126739	(187168820)	C	LTR33	LTR/ERVL	(302)	213	27	2510800
188	21.2	7.0	0.0	chr3	11126766	11126845	(187168714)	C	L2a	LINE/L2	(291)	3135	3050	2510798
842	26.7	11.0	2.7	chr3	11126953	11127414	(187168145)	C	L2a	LINE/L2	(323)	3103	2595	2510801
183	20.5	2.5	0.0	chr3	11271847	11271885	(187023674)	+	L2a	LINE/L2	3348	3387	(39)	2511141
181	33.7	0.0	12.2	chr3	11693346	11693443	(186602116)	C	L2c	LINE/L2	(5)	3382	3297	2511884
189	34.5	7.2	0.8	chr3	11693478	11693594	(186601965)	C	L3	LINE/CR1	(45)	4054	3930	2511885
2405	9.9	0.0	0.0	chr3	11751090	11751391	(186544168)	C	AluSz	SINE/Alu	(10)	302	1	2512020
491	24.4	3.4	0.0	chr3	11847149	11847263	(186448296)	C	L1MB5	LINE/L1	(0)	6174	6056	2512234
225	27.3	23.1	0.0	chr3	12186869	12186978	(186108581)	C	MIRc	SINE/MIR	(124)	144	2	2512826
13	22.5	0.0	0.0	chr3	12288097	12288132	(186007427)	+	G-rich	Low_complexity	1	36	(0)	2513013
274	21.0	14.7	0.0	chr3	12819614	12819694	(185475865)	+	MIRb	SINE/MIR	63	157	(111)	2514180
436	25.6	2.9	1.5	chr3	12932677	12932811	(185362748)	C	MIRb	SINE/MIR	(119)	149	13	2514331
232	27.0	1.3	0.0	chr3	12933190	12933263	(185362296)	+	L1M5	LINE/L1	5582	5656	(506)	2514332
667	18.9	8.8	5.4	chr3	13301874	13302058	(184993501)	+	MER53	DNA/hAT	1	192	(1)	2515002
569	29.5	11.4	1.1	chr3	13302059	13302401	(184993158)	+	L2a	LINE/L2	2988	3328	(98)	2515003
2469	7.7	0.0	0.0	chr3	13302438	13302737	(184992822)	+	AluY	SINE/Alu	1	300	(11)	2515004
2077	9.3	0.0	0.0	chr3	13937756	13938014	(184357545)	C	AluSx1	SINE/Alu	(17)	295	37	2516164
2373	9.5	0.0	1.0	chr3	13938136	13938441	(184357118)	C	AluSg4	SINE/Alu	(7)	303	1	2516165
14	0.0	0.0	0.0	chr3	14947613	14947630	(183347929)	+	(GGC)n	Simple_repeat	1	18	(0)	2517903
17	23.7	4.4	2.8	chr3	14947927	14947994	(183347565)	+	(GGC)n	Simple_repeat	1	71	(0)	2517904
13	11.9	0.0	6.2	chr3	15332634	15332665	(182962894)	+	(CCCGC)n	Simple_repeat	1	32	(0)	2518598
2033	20.6	2.3	4.8	chr3	15896795	15897331	(182398228)	+	MLT1E1A	LTR/ERVL-MaLR	63	678	(2)	2519582
1381	13.6	17.4	0.3	chr3	16533507	16533842	(181761717)	C	LTR47A	LTR/ERVL	(0)	452	1	2520659
2202	16.1	2.7	0.3	chr3	16533843	16534209	(181761350)	C	MSTB1	LTR/ERVL-MaLR	(40)	392	17	2520660
12341	13.0	2.2	2.1	chr3	17448954	17451626	(180843933)	+	L1PA7	LINE/L1	6	2429	(4070)	2521884
23366	7.7	0.7	0.4	chr3	17612892	17619039	(180676520)	C	L1PA6	LINE/L1	(0)	6154	1	2522112
19497	7.9	0.4	0.1	chr3	17693114	17697953	(180597606)	+	L1PA6	LINE/L1	5	4838	(1308)	2522225
34	29.0	0.7	4.6	chr3	18444859	18444970	(179850589)	+	G-rich	Low_complexity	6	151	(0)	2523291
12	21.4	3.3	6.3	chr3	18445150	18445210	(179850349)	+	(CGGCC)n	Simple_repeat	1	63	(0)	2523292
18	10.7	0.0	3.0	chr3	18445289	18445321	(179850238)	+	(GCC)n	Simple_repeat	1	33	(0)	2523293
14	16.2	0.0	0.0	chr3	19947408	19947435	(178348124)	+	(CGC)n	Simple_repeat	1	28	(0)	2525351
9587	5.0	0.9	11.2	chr3	20547286	20548829	(177746730)	C	SVA_B	Retroposon/SVA	(0)	1383	1	2526293
23833	7.3	1.0	0.1	chr3	23030418	23036543	(175259016)	C	L1PA6	LINE/L1	(1)	6338	1	2529551
24	32.4	2.1	4.1	chr3	23945008	23945149	(174350410)	+	GA-rich	Low_complexity	1	145	(0)	2531073
18	6.0	8.6	0.0	chr3	23945493	23945527	(174350032)	+	(CGG)n	Simple_repeat	1	38	(0)	2531074
12	23.1	2.0	4.0	chr3	23945800	23945848	(174349711)	+	(GCCCG)n	Simple_repeat	1	50	(0)	2531075
15	9.8	0.0	0.0	chr3	23946025	23946046	(174349513)	+	(GC)n	Simple_repeat	1	22	(0)	2531076
26023	6.7	0.7	0.2	chr3	25328559	25334693	(172960866)	+	L1PA5	LINE/L1	4	6154	(0)	2533178
21592	9.8	1.3	2.1	chr3	25356515	25362928	(172932631)	C	L1PA7	LINE/L1	(0)	6469	8	2533210
14	0.0	0.0	0.0	chr3	25664850	25664867	(172630692)	+	(GCC)n	Simple_repeat	1	18	(0)	2533626
1762	15.1	17.8	1.1	chr3	27476514	27476869	(170818690)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2536134
32	3.2	0.0	0.0	chr3	28089158	28089189	(170206370)	+	(AC)n	Simple_repeat	1	32	(0)	2537278
543	31.6	5.5	4.3	chr3	28908365	28908599	(169386960)	+	MIRb	SINE/MIR	3	240	(28)	2538460
440	30.5	6.1	8.7	chr3	28908630	28908675	(169386884)	C	MIRb	SINE/MIR	(48)	220	182	2538461
2084	13.3	12.4	1.3	chr3	28908676	28909055	(169386504)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2538462
16	0.0	4.3	0.0	chr3	29854015	29854037	(168441522)	+	(TTTG)n	Simple_repeat	1	24	(0)	2539752
11	9.0	4.7	8.9	chr3	30770680	30770722	(167524837)	+	(CTCAGC)n	Simple_repeat	1	45	(0)	2541053
20	9.7	0.0	2.8	chr3	31532887	31532922	(166762637)	+	(CCT)n	Simple_repeat	1	36	(0)	2542253
14	18.9	4.5	2.2	chr3	31533127	31533170	(166762389)	+	(GGC)n	Simple_repeat	1	46	(0)	2542254
26535	5.4	0.2	0.1	chr3	32010454	32016606	(166278953)	+	L1PA4	LINE/L1	1	6154	(1)	2543040
618	28.6	9.7	0.0	chr3	32275316	32275521	(166020038)	+	MIRb	SINE/MIR	20	247	(21)	2543552
2069	14.5	0.3	0.0	chr3	32275645	32275940	(166019619)	C	AluSz6	SINE/Alu	(7)	305	9	2543553
25098	6.4	1.1	0.1	chr3	33281056	33287153	(165008406)	C	L1PA5	LINE/L1	(6)	6148	4	2545614
25464	7.0	1.3	0.1	chr3	33964690	33970774	(164324785)	C	L1PA5	LINE/L1	(0)	6327	177	2546758
191	35.1	0.0	0.0	chr3	33970830	33970886	(164324673)	+	L2b	LINE/L2	3313	3369	(6)	2546759
235	27.3	0.0	1.8	chr3	37147851	37147906	(161147653)	+	AmnSINE1	SINE/5S-Deu-L2	100	154	(421)	2551045
45	24.3	0.0	0.0	chr3	37861792	37861898	(160433661)	+	(CCCT)n	Simple_repeat	1	107	(0)	2552186
20	12.6	1.6	8.1	chr3	38649700	38649760	(159645799)	+	G-rich	Low_complexity	1	62	(0)	2553332
8868	5.7	3.5	3.9	chr3	39655292	39656655	(158638904)	+	SVA_B	Retroposon/SVA	25	1383	(0)	2554861
248	29.4	5.5	2.9	chr3	39811254	39811358	(158484201)	+	MIRc	SINE/MIR	114	221	(47)	2555070
294	31.0	7.3	3.4	chr3	40938026	40938196	(157357363)	C	MIR3	SINE/MIR	(85)	183	5	2556793
15	29.1	2.9	1.4	chr3	41199911	41199979	(157095580)	+	G-rich	Low_complexity	1	71	(0)	2557193
17179	7.4	1.8	1.9	chr3	42103716	42104949	(156190610)	+	L1P2	LINE/L1	4	1250	(4934)	2558559
27541	4.4	0.1	0.1	chr3	42281923	42288074	(156007485)	C	L1PA3	LINE/L1	(0)	6155	4	2558836
11	15.3	2.4	7.0	chr3	42502630	42502671	(155792888)	+	(CAGCGC)n	Simple_repeat	1	43	(0)	2559219
1226	29.0	10.3	4.9	chr3	43115630	43116159	(155179400)	+	MLT1K	LTR/ERVL-MaLR	4	565	(30)	2560163
687	21.8	16.3	0.0	chr3	43374303	43374508	(154921051)	C	MIR	SINE/MIR	(1)	261	16	2560541
751	30.6	11.7	3.7	chr3	43539615	43540021	(154755538)	C	Tigger19b	DNA/TcMar-Tigger	(29)	521	78	2560768
16965	8.6	0.8	1.8	chr3	43659086	43660672	(154634887)	+	L1PA7	LINE/L1	5	1578	(4606)	2560957
218	25.9	1.8	0.0	chr3	45147529	45147582	(153147977)	C	L2b	LINE/L2	(81)	3294	3240	2563315
290	25.3	0.0	8.5	chr3	45147635	45147716	(153147843)	C	MIR3	SINE/MIR	(24)	184	110	2563316
2079	20.7	9.7	0.5	chr3	46415869	46416315	(151879244)	+	ERVL-B4-int	LTR/ERVL	2116	2608	(3106)	2565357
2084	14.1	0.6	0.9	chr3	46416413	46416727	(151878832)	C	MER50	LTR/ERV1	(23)	711	398	2565362
15	8.8	0.0	0.0	chr3	46717729	46717752	(151577807)	+	(CAG)n	Simple_repeat	1	24	(0)	2565828
12	17.7	3.1	0.0	chr3	46750642	46750673	(151544886)	+	(CGGAGC)n	Simple_repeat	1	33	(0)	2565884
13	19.1	0.0	0.0	chr3	46750721	46750750	(151544809)	+	(CAG)n	Simple_repeat	1	30	(0)	2565885
457	18.8	5.9	0.0	chr3	46755840	46755935	(151539624)	+	MER5A	DNA/hAT-Charlie	17	118	(71)	2565890
239	23.5	4.5	0.3	chr3	46755938	46756030	(151539529)	C	MIR3	SINE/MIR	(116)	152	57	2565891
429	20.8	5.9	0.0	chr3	46811515	46811610	(151483949)	+	MER5A	DNA/hAT-Charlie	17	118	(71)	2565965
248	26.4	5.2	1.1	chr3	46811614	46811705	(151483854)	C	MIRb	SINE/MIR	(116)	152	57	2565966
7010	15.8	5.8	3.9	chr3	47359232	47360081	(150935478)	+	MSTB-int	LTR/ERVL-MaLR	463	1348	(303)	2566981
302	5.9	0.0	0.0	chr3	47360082	47360115	(150935444)	+	AluYk11	SINE/Alu	1	34	(277)	2566984
3010	7.6	7.4	2.3	chr3	47360119	47360590	(150934969)	C	LTR10F	LTR/ERV1	(7)	504	7	2566985
12	22.4	0.0	2.6	chr3	47803441	47803478	(150492081)	+	G-rich	Low_complexity	1	38	(0)	2568028
10251	5.3	3.6	0.8	chr3	48061181	48062514	(150233045)	+	SVA_C	Retroposon/SVA	12	1384	(0)	2568551
11	27.4	2.0	2.0	chr3	48088856	48088905	(150206654)	+	(GGAGCCG)n	Simple_repeat	1	51	(0)	2568628
13	21.1	2.6	0.0	chr3	48089099	48089136	(150206423)	+	(TGCGGCC)n	Simple_repeat	1	39	(0)	2568629
749	17.6	3.1	8.8	chr3	48089409	48089613	(150205946)	+	MER33	DNA/hAT-Charlie	27	219	(105)	2568630
572	28.3	8.7	4.2	chr3	48232383	48232666	(150062893)	+	HERVL40-int	LTR/ERVL	3510	3807	(1723)	2568991
14	16.9	0.0	2.9	chr3	48419811	48419845	(149875714)	+	(GGCAGG)n	Simple_repeat	1	35	(0)	2569291
13	8.5	0.0	3.7	chr3	48685810	48685836	(149609723)	+	(GGCAG)n	Simple_repeat	1	27	(0)	2569696
17	26.6	5.3	3.0	chr3	48685860	48685954	(149609605)	+	(CGCCG)n	Simple_repeat	1	100	(0)	2569697
15	14.9	2.6	2.5	chr3	48686065	48686103	(149609456)	+	(CCCCTCA)n	Simple_repeat	1	40	(0)	2569698
13	24.9	3.7	1.8	chr3	49689476	49689529	(148606030)	+	(GCGCGT)n	Simple_repeat	1	56	(0)	2571792
1779	15.4	2.6	1.6	chr3	51154967	51155272	(147140287)	C	AluJr4	SINE/Alu	(3)	309	1	2574006
291	21.1	14.8	4.6	chr3	51538360	51538468	(146757091)	C	MIRb	SINE/MIR	(45)	223	102	2574562
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
14	17.3	5.1	0.0	chr3	51538872	51538910	(146756649)	+	(CGGCG)n	Simple_repeat	1	41	(0)	2574564
17	20.8	4.0	0.0	chr3	52685591	52685640	(145609919)	+	(CCGCC)n	Simple_repeat	1	52	(0)	2576289
28	27.3	4.0	2.3	chr3	52685752	52685875	(145609684)	+	(GCC)n	Simple_repeat	1	129	(0)	2576290
16	0.0	0.0	0.0	chr3	53244886	53244903	(145050656)	+	(A)n	Simple_repeat	1	18	(0)	2577268
2364	9.9	0.0	0.7	chr3	53245022	53245324	(145050235)	+	AluSq2	SINE/Alu	1	301	(12)	2577269
24721	7.3	0.8	0.2	chr3	53391156	53397284	(144898275)	+	L1PA6	LINE/L1	4	6151	(3)	2577567
193	33.7	9.3	3.5	chr3	53677283	53677485	(144618074)	+	MIRc	SINE/MIR	38	253	(15)	2577953
511	26.4	2.0	0.0	chr3	55356858	55357001	(142938558)	C	MIR	SINE/MIR	(104)	158	12	2580322
197	27.3	8.3	0.0	chr3	55357045	55357099	(142938460)	C	MIRb	SINE/MIR	(183)	85	26	2580323
2149	13.8	3.8	1.2	chr3	55357324	55357652	(142937907)	+	MER1B	DNA/hAT-Charlie	2	339	(0)	2580324
2546	18.6	3.8	3.9	chr3	56115663	56116221	(142179338)	+	MER74A	LTR/ERVL	1	558	(0)	2581527
22755	7.1	1.1	0.4	chr3	56576407	56582528	(141713031)	C	L1PA5	LINE/L1	(0)	6154	4	2582388
8935	3.8	0.0	25.1	chr3	56583299	56585147	(141710412)	C	SVA_C	Retroposon/SVA	(0)	1384	1	2582391
490	23.6	15.1	0.7	chr3	57555575	57555742	(140739817)	+	MIRb	SINE/MIR	58	255	(13)	2584171
2276	12.0	0.3	0.0	chr3	58060353	58060651	(140234908)	C	AluSx	SINE/Alu	(11)	301	2	2585302
1593	10.9	16.4	2.2	chr3	58060652	58060799	(140234760)	+	AluJo	SINE/Alu	118	312	(0)	2585301
24	0.0	3.1	0.0	chr3	58060801	58060832	(140234727)	+	(AAAGA)n	Simple_repeat	1	33	(0)	2585303
257	28.5	2.1	12.2	chr3	58177598	58177673	(140117886)	C	MIRb	SINE/MIR	(163)	105	43	2585483
219	12.1	0.0	0.0	chr3	58178221	58178253	(140117306)	C	L2b	LINE/L2	(17)	3358	3326	2585485
15	16.5	8.9	1.6	chr3	58332712	58332767	(139962792)	+	(GCGCAG)n	Simple_repeat	1	61	(0)	2585826
16	26.4	1.4	4.2	chr3	58333103	58333172	(139962387)	+	G-rich	Low_complexity	1	71	(0)	2585827
1324	25.8	8.0	6.8	chr3	58457655	58457766	(139837793)	+	L1MD2	LINE/L1	72	182	(6365)	2586048
1804	10.8	5.5	3.8	chr3	58457767	58458053	(139837506)	+	AluSz	SINE/Alu	3	294	(18)	2586049
1324	25.8	8.0	6.8	chr3	58458054	58458204	(139837355)	+	L1MD2	LINE/L1	183	326	(6221)	2586048
57	0.0	0.0	0.0	chr3	58458205	58458253	(139837306)	+	(GT)n	Simple_repeat	1	49	(0)	2586050
1324	25.8	8.0	6.8	chr3	58458254	58458558	(139837001)	+	L1MD2	LINE/L1	327	648	(5899)	2586048
13509	10.1	1.2	3.2	chr3	58675259	58679065	(139616494)	C	L1PA7	LINE/L1	(2659)	3802	8	2586492
248	16.3	0.5	15.7	chr3	58679067	58679149	(139616410)	C	MLT1D	LTR/ERVL-MaLR	(457)	197	65	2586490
11878	2.0	0.0	0.1	chr3	58814309	58816278	(139479281)	+	L1PA3	LINE/L1	3942	5910	(245)	2586672
26556	2.1	0.0	0.0	chr3	58816279	58822304	(139473255)	+	L1PA2	LINE/L1	125	6151	(4)	2586673
1904	14.0	0.0	0.0	chr3	59325503	59325773	(138969786)	+	AluSz	SINE/Alu	42	312	(0)	2587362
1770	14.7	11.2	4.8	chr3	59325781	59326153	(138969406)	C	MSTA	LTR/ERVL-MaLR	(28)	400	1	2587363
233	18.6	1.4	6.7	chr3	59326154	59326227	(138969332)	+	MER5A1	DNA/hAT-Charlie	92	161	(5)	2587364
9883	6.3	2.8	1.8	chr3	60926959	60928326	(137367233)	+	SVA_B	Retroposon/SVA	1	1383	(0)	2589738
21040	10.7	0.7	2.1	chr3	64776494	64779116	(133516443)	+	L1PA7	LINE/L1	8	2629	(3832)	2596333
259	28.1	0.0	4.5	chr3	64943752	64943818	(133351741)	C	MIRb	SINE/MIR	(192)	76	13	2596636
1500	13.9	1.7	0.4	chr3	65808285	65808522	(132487037)	+	AluSx	SINE/Alu	67	307	(5)	2598056
20331	13.1	1.5	1.0	chr3	67139740	67142859	(131152700)	C	L1PA8	LINE/L1	(3321)	3140	6	2600396
674	31.6	0.8	7.1	chr3	67142865	67143147	(131152412)	+	L2a	LINE/L2	2984	3248	(178)	2600395
22829	9.1	1.0	0.5	chr3	67947817	67953946	(130341613)	+	L1PA6	LINE/L1	5	6149	(5)	2601670
2003	14.2	0.0	4.2	chr3	69002658	69002967	(129292592)	C	AluJr	SINE/Alu	(15)	297	1	2603304
549	24.2	10.3	15.6	chr3	69003016	69003284	(129292275)	+	L1MD2	LINE/L1	6021	6273	(86)	2603305
1988	9.8	10.3	0.3	chr3	69003315	69003611	(129291948)	+	THE1B	LTR/ERVL-MaLR	1	330	(34)	2603306
818	26.9	10.8	7.6	chr3	70005224	70005727	(128289832)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	2	2605177
210	31.9	8.5	2.7	chr3	71371466	71371503	(126924056)	+	L2c	LINE/L2	2846	2883	(536)	2607133
1662	21.4	0.0	1.8	chr3	71371504	71371788	(126923771)	+	AluJr	SINE/Alu	1	280	(32)	2607134
428	30.9	8.9	7.6	chr3	71371789	71372004	(126923555)	+	L2c	LINE/L2	2884	3106	(281)	2607133
289	24.3	1.4	0.0	chr3	72099089	72099158	(126196401)	+	LTR16E1	LTR/ERVL	467	537	(1)	2608464
264	20.0	1.8	0.0	chr3	72099178	72099232	(126196327)	C	LTR33	LTR/ERVL	(434)	81	26	2608461
515	29.7	1.3	0.0	chr3	72099557	72099729	(126195830)	C	MIRb	SINE/MIR	(89)	179	2	2608465
2580	6.1	6.0	2.6	chr3	72867271	72867621	(125427938)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2610090
544	28.6	12.7	8.6	chr3	72867677	72867909	(125427650)	+	MER115	DNA/hAT-Tip100	130	373	(320)	2610091
980	28.9	14.0	4.9	chr3	72897151	72897678	(125397881)	C	MLT1K	LTR/ERVL-MaLR	(9)	586	3	2610153
26034	6.5	0.5	0.2	chr3	73332851	73338990	(124956569)	C	L1PA5	LINE/L1	(3)	6151	4	2611051
1795	20.6	9.6	0.9	chr3	75608479	75610682	(122684877)	+	SATR1	Satellite	1	2396	(1)	2614490
1839	15.7	6.3	2.4	chr3	76602384	76602716	(121692843)	C	THE1B	LTR/ERVL-MaLR	(0)	364	18	2615767
432	7.8	12.3	0.0	chr3	76602716	76602779	(121692780)	C	THE1B	LTR/ERVL-MaLR	(274)	90	18	2615768
546	20.3	7.8	0.0	chr3	80233375	80233492	(118062067)	+	MER20	DNA/hAT-Charlie	91	218	(1)	2620506
8781	3.4	0.1	26.2	chr3	82583835	82585707	(115709852)	+	SVA_D	Retroposon/SVA	1	1385	(1)	2623574
5274	27.5	6.6	3.4	chr3	83928385	83929751	(114365808)	+	MER61-int	LTR/ERV1	749	2147	(5041)	2625170
36	25.1	0.0	1.0	chr3	84958994	84959090	(113336469)	+	(GCCGCC)n	Simple_repeat	1	97	(0)	2626424
9286	17.6	2.0	1.2	chr3	85698793	85699946	(112595613)	C	MSTA-int	LTR/ERVL-MaLR	(2)	1629	470	2627371
8025	15.2	3.4	1.9	chr3	86618874	86621051	(111674508)	+	HUERS-P3-int	LTR/ERV1	744	3284	(5635)	2628504
22512	10.3	0.9	1.9	chr3	87647890	87654326	(110641233)	C	L1PA7	LINE/L1	(11)	6458	11	2629789
19	26.4	4.1	4.5	chr3	87792497	87792618	(110502941)	+	GA-rich	Low_complexity	1	121	(0)	2629960
23472	7.7	1.4	0.3	chr3	90187674	90193762	(108101797)	C	L1PA6	LINE/L1	(20)	6134	1	2632878
4799	12.9	3.5	0.8	chr3	94344956	94345714	(103949845)	C	LTR17	LTR/ERV1	(0)	780	1	2634192
17816	18.6	2.7	3.5	chr3	96490545	96493473	(101802086)	C	L1PA15	LINE/L1	(2647)	4119	1225	2636748
17302	7.5	0.4	0.6	chr3	96526667	96528751	(101766808)	+	L1PA6	LINE/L1	174	2266	(4091)	2636783
25368	6.6	0.3	0.1	chr3	96979061	96985198	(101310361)	C	L1PA5	LINE/L1	(4)	6150	1	2637243
13	13.6	2.9	2.9	chr3	97821959	97821992	(100473567)	+	G-rich	Low_complexity	1	35	(0)	2638281
12118	9.4	0.5	1.1	chr3	98681518	98681952	(99613607)	+	L1PA7	LINE/L1	2	421	(6040)	2639276
41	0.0	0.0	0.0	chr3	98681953	98681987	(99613572)	+	(TG)n	Simple_repeat	1	35	(0)	2639277
21821	9.1	0.9	0.5	chr3	98681988	98688011	(99607548)	+	L1PA7	LINE/L1	422	6462	(7)	2639276
17	18.6	0.0	7.0	chr3	98902062	98902118	(99393441)	+	(CCTCGCT)n	Simple_repeat	1	57	(0)	2639607
1124	20.4	1.4	0.5	chr3	98983680	98983896	(99311663)	+	MER20	DNA/hAT-Charlie	1	219	(0)	2639715
4744	7.8	0.6	0.0	chr3	100667181	100667810	(97627749)	C	L1PA7	LINE/L1	(0)	6154	5521	2642060
2421	15.0	1.9	2.1	chr3	100667811	100668238	(97627321)	C	L1P3	LINE/L1	(6025)	436	10	2642061
570	27.6	4.8	2.1	chr3	100668268	100668508	(97627051)	C	MLT1H2	LTR/ERVL-MaLR	(196)	353	82	2642057
13025	10.6	1.6	1.1	chr3	101236400	101239038	(97056521)	+	L1PA7	LINE/L1	1	2621	(3840)	2642758
9005	6.1	0.1	16.1	chr3	101550905	101552496	(96743063)	+	SVA_A	Retroposon/SVA	51	1387	(0)	2643160
16464	8.7	0.7	0.8	chr3	101967376	101971554	(96324005)	C	L1PA6	LINE/L1	(1979)	4340	181	2643891
2128	12.8	0.3	2.0	chr3	101971558	101971863	(96323696)	C	AluSg	SINE/Alu	(9)	301	1	2643892
7482	21.8	2.1	6.4	chr3	102363032	102364740	(95930819)	+	L1M2c	LINE/L1	638	2270	(4519)	2644439
12	26.8	1.9	3.6	chr3	103726807	103726860	(94568699)	+	(CACATG)n	Simple_repeat	1	55	(0)	2646173
1630	19.3	7.9	1.6	chr3	103726865	103727232	(94568327)	+	MLT1A1	LTR/ERVL-MaLR	13	405	(3)	2646174
2195	14.9	2.5	0.0	chr3	104042642	104042996	(94252563)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2646577
1294	14.5	6.2	0.8	chr3	104146560	104146803	(94148756)	+	MSTA	LTR/ERVL-MaLR	1	258	(170)	2646694
7725	21.3	3.5	5.3	chr3	104278073	104279352	(94016207)	C	HUERS-P3b-int	LTR/ERV1	(5536)	1882	615	2646857
9595	19.0	2.7	1.6	chr3	104301057	104304006	(93991553)	C	L1MA4A	LINE/L1	(277)	6728	1900	2646883
21960	12.7	1.2	1.3	chr3	104304018	104309002	(93986557)	+	L1PA7	LINE/L1	8	5021	(1440)	2646884
21	3.3	0.0	3.0	chr3	105869047	105869079	(92426480)	+	(CGGGG)n	Simple_repeat	1	33	(0)	2648801
10223	17.7	4.7	0.8	chr3	106134998	106136985	(92158574)	+	L1PA13	LINE/L1	3	2072	(4713)	2649130
22	22.9	1.6	1.6	chr3	108090911	108090973	(90204586)	+	(CCG)n	Simple_repeat	1	64	(0)	2651800
23864	7.6	0.4	0.9	chr3	109664744	109670946	(88624613)	+	L1PA6	LINE/L1	174	6324	(3)	2654259
1172	28.2	8.2	7.6	chr3	110430058	110430529	(87865030)	C	LTR16B1	LTR/ERVL	(5)	475	1	2655262
7899	9.9	2.4	0.1	chr3	110768851	110769943	(87525616)	+	L1P2	LINE/L1	4	1122	(5062)	2655683
26171	3.5	0.2	0.0	chr3	110911438	110917460	(87378099)	C	L1PA3	LINE/L1	(0)	6155	125	2655871
207	23.2	1.4	12.7	chr3	110917608	110917686	(87377873)	C	MIRb	SINE/MIR	(29)	239	170	2655872
22446	11.6	2.0	1.4	chr3	111372807	111379385	(86916174)	+	L1PB1	LINE/L1	253	6863	(4)	2656453
18340	12.4	1.8	2.6	chr3	111441150	111447572	(86847987)	C	L1PA7	LINE/L1	(9)	6460	7	2656515
461	33.9	3.9	2.4	chr3	111447586	111447836	(86847723)	+	LTR83	LTR/ERVL	148	402	(378)	2656516
1949	14.4	12.2	2.1	chr3	111660956	111661337	(86634222)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	2656743
11121	12.4	1.4	0.0	chr3	111661338	111662946	(86632613)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	2656743
246	23.6	0.0	0.0	chr3	113611214	113611268	(84684291)	C	L1ME5	LINE/L1	(21)	6173	6119	2659456
2260	7.9	7.0	0.0	chr3	113611344	113611620	(84683939)	C	AluSx3	SINE/Alu	(13)	298	1	2659457
16	13.2	0.0	9.8	chr3	113696289	113696339	(84599220)	+	(CCGCCC)n	Simple_repeat	1	51	(0)	2659586
18	20.7	4.2	4.0	chr3	113696340	113696359	(84599200)	+	(GCCGCCC)n	Simple_repeat	2	75	(0)	2659587
11	25.3	3.2	4.7	chr3	113699296	113699357	(84596202)	+	(CTCCTT)n	Simple_repeat	1	64	(0)	2659591
2040	9.2	7.7	1.4	chr3	113699388	113699679	(84595880)	C	AluSx	SINE/Alu	(0)	312	1	2659592
22	10.0	4.7	0.0	chr3	113838845	113838887	(84456672)	+	(GGTGC)n	Simple_repeat	1	45	(0)	2659865
54	0.0	0.0	0.0	chr3	114800751	114800799	(83494760)	+	(AAAAT)n	Simple_repeat	1	49	(0)	2661237
9046	12.1	3.1	1.3	chr3	119043479	119045121	(79250438)	+	L1PB1	LINE/L1	1189	2920	(3964)	2667038
25841	3.1	0.2	0.1	chr3	119045133	119051153	(79244406)	+	L1PA3	LINE/L1	126	6148	(7)	2667040
16	6.5	5.9	2.8	chr3	120093888	120093921	(78201638)	+	G-rich	Low_complexity	1	36	(0)	2668615
23761	8.1	0.3	0.3	chr3	120961275	120967428	(77328131)	C	L1PA6	LINE/L1	(0)	6154	9	2669915
26444	4.6	0.1	0.1	chr3	120973555	120979692	(77315867)	C	L1PA3	LINE/L1	(11)	6144	9	2669920
24098	7.3	0.6	0.4	chr3	121857673	121863828	(76431731)	C	L1PA5	LINE/L1	(0)	6154	4	2671121
2310	9.3	1.3	5.4	chr3	122095172	122095484	(76200075)	C	AluSx1	SINE/Alu	(12)	300	1	2671474
424	25.6	12.0	2.3	chr3	122095487	122095614	(76199945)	C	LTR85b	LTR/Gypsy?	(33)	751	610	2671475
10673	4.3	0.4	6.5	chr3	122201000	122202475	(76093084)	C	SVA_D	Retroposon/SVA	(0)	1386	2	2671628
203	23.9	5.6	1.2	chr3	123689541	123689620	(74605939)	+	MIRc	SINE/MIR	57	144	(124)	2674149
2140	20.5	4.5	3.6	chr3	125686659	125693730	(72601829)	C	SATR2	Satellite	(244)	6594	1	2677543
1802	22.8	3.6	1.9	chr3	125735296	125739359	(72556200)	C	SATR2	Satellite	(168)	3038	1	2677596
23	18.4	6.9	4.6	chr3	125958869	125958969	(72336590)	+	(AGCCC)n	Simple_repeat	1	108	(0)	2677947
18	11.4	0.0	6.8	chr3	125990346	125990389	(72305170)	+	(GCCCC)n	Simple_repeat	1	44	(0)	2677991
1621	30.6	7.6	6.7	chr3	126227353	126228177	(72067382)	+	L1MEj	LINE/L1	4	836	(1324)	2678277
822	23.4	8.0	0.0	chr3	126228302	126228519	(72067040)	+	Zaphod3	DNA/hAT-Tip100	1	237	(2386)	2678278
2057	19.7	6.9	2.5	chr3	126228520	126229029	(72066530)	C	L1MC3	LINE/L1	(1)	7784	7251	2678279
4299	14.5	3.2	2.5	chr3	126317250	126317972	(71977587)	+	MER50	LTR/ERV1	7	734	(0)	2678405
605	33.8	7.5	3.7	chr3	126318203	126318687	(71976872)	+	MamRep137	DNA/TcMar-Tigger	5	509	(1)	2678406
243	20.3	0.0	0.4	chr3	126376268	126376321	(71919238)	+	MIR3	SINE/MIR	108	165	(65)	2678488
5606	3.4	2.0	0.4	chr3	127293241	127293917	(71001642)	C	SVA_B	Retroposon/SVA	(0)	1383	696	2679806
1530	17.8	1.9	0.0	chr3	127294006	127294258	(71001301)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	248	2679807
409	29.1	5.0	0.7	chr3	128410542	128410676	(69884883)	+	MIR	SINE/MIR	44	184	(78)	2681689
669	22.1	0.0	0.0	chr3	128607505	128607631	(69687928)	+	FLAM_C	SINE/Alu	2	128	(5)	2682035
2231	15.2	5.3	3.5	chr3	129075321	129075735	(69219824)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	9	2682991
2224	10.5	0.0	3.5	chr3	129075736	129076048	(69219511)	+	AluSq2	SINE/Alu	1	302	(11)	2682992
410	28.8	7.9	8.5	chr3	129925668	129925974	(68369585)	C	LTR78	LTR/ERV1	(345)	959	655	2684686
824	27.8	12.4	6.7	chr3	129926053	129926459	(68369100)	C	LTR78	LTR/ERV1	(763)	541	112	2684686
817	20.6	1.3	3.8	chr3	130313551	130313710	(67981849)	C	FRAM	SINE/Alu	(20)	156	1	2685313
14	15.0	2.4	4.8	chr3	130517100	130517140	(67778419)	+	G-rich	Low_complexity	1	42	(0)	2685612
11970	10.0	1.2	2.8	chr3	131041809	131045185	(67250374)	+	L1P3	LINE/L1	8	3370	(3091)	2686332
24653	6.9	0.6	0.2	chr3	131115990	131122113	(67173446)	C	L1PA5	LINE/L1	(13)	6141	4	2686438
11	27.7	0.0	0.0	chr3	132660552	132660590	(65634969)	+	(GGAGCG)n	Simple_repeat	1	39	(0)	2688747
1504	25.5	11.5	0.4	chr3	132955898	132956401	(65339158)	C	L2	LINE/L2	(844)	2575	2009	2689215
11264	10.6	0.7	2.1	chr3	132956411	132960427	(65335132)	+	L1PA7	LINE/L1	9	4010	(2451)	2689216
21634	10.8	1.5	1.1	chr3	133201312	133207435	(65088124)	C	L1PA7	LINE/L1	(14)	6140	8	2689552
14	27.8	1.2	6.0	chr3	134066526	134066607	(64228952)	+	G-rich	Low_complexity	1	83	(0)	2690877
2781	24.2	14.9	8.9	chr3	134711020	134711750	(63583809)	C	HAL1	LINE/L1	(222)	2285	1491	2691833
17894	3.2	0.1	0.3	chr3	135002248	135005976	(63289583)	C	L1HS	LINE/L1	(2293)	3853	133	2692267
10341	8.8	4.8	6.1	chr3	136762488	136764089	(61531470)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2695026
12349	10.9	0.3	2.3	chr3	138560064	138561743	(59733816)	+	L1PA7	LINE/L1	5	1654	(4807)	2697722
2079	11.8	0.3	0.7	chr3	138610588	138610883	(59684676)	C	AluSz	SINE/Alu	(17)	295	1	2697792
199	23.6	5.2	6.8	chr3	138611041	138611099	(59684460)	+	L2b	LINE/L2	3313	3370	(5)	2697793
208	26.5	3.5	5.7	chr3	139102963	139103050	(59192509)	+	MIRb	SINE/MIR	42	127	(141)	2698816
413	23.4	10.5	3.8	chr3	139103568	139103700	(59191859)	C	MIRb	SINE/MIR	(39)	229	87	2698817
27379	4.1	0.7	0.2	chr3	139190645	139196765	(59098794)	C	L1PA4	LINE/L1	(0)	6155	2	2698944
333	27.7	7.2	4.6	chr3	139555901	139556125	(58739434)	C	L2b	LINE/L2	(198)	3189	2960	2699524
2082	22.8	6.8	0.8	chr3	139556205	139556729	(58738830)	C	L1ME1	LINE/L1	(0)	6179	5621	2699525
969	19.9	9.1	2.9	chr3	139617353	139617590	(58677969)	+	MIR	SINE/MIR	4	257	(5)	2699607
1983	7.8	0.8	0.0	chr3	141659433	141659675	(56635884)	C	AluSx1	SINE/Alu	(67)	245	1	2702648
225	27.3	10.3	3.5	chr3	141659676	141659819	(56635740)	C	LTR103_Mam	LTR/ERV1?	(152)	323	169	2702649
1870	13.8	0.0	6.6	chr3	142281048	142281198	(56014361)	C	AluSx1	SINE/Alu	(169)	143	2	2703882
14487	14.5	13.6	14.4	chr3	142281199	142282698	(56012861)	+	HUERS-P3b-int	LTR/ERV1	1166	2937	(4251)	2703881
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
963	8.7	0.0	0.0	chr3	142602843	142602957	(55692602)	C	AluSz	SINE/Alu	(168)	144	30	2704399
26	13.8	4.3	4.2	chr3	142963601	142963669	(55331890)	+	(CGG)n	Simple_repeat	1	72	(0)	2704981
13	9.8	0.0	0.0	chr3	142963695	142963716	(55331843)	+	(GCC)n	Simple_repeat	1	22	(0)	2704982
11	20.2	3.5	6.7	chr3	142964026	142964083	(55331476)	+	G-rich	Low_complexity	1	60	(0)	2704983
5718	3.1	0.9	0.1	chr3	143073723	143074388	(55221171)	+	SVA_C	Retroposon/SVA	710	1380	(4)	2705149
13	22.3	0.0	8.2	chr3	143119664	143119724	(55175835)	+	G-rich	Low_complexity	1	61	(0)	2705218
27200	3.4	0.2	0.0	chr3	145252618	145258622	(53036937)	C	L1PA3	LINE/L1	(0)	6155	138	2708101
351	6.5	0.0	0.0	chr3	145258626	145258671	(53036888)	C	HUERS-P3b-int	LTR/ERV1	(4228)	989	944	2708100
1809	19.1	1.8	8.3	chr3	145258672	145259519	(53036040)	C	HUERS-P3b-int	LTR/ERV1	(4774)	2644	2343	2708100
24937	7.6	0.8	0.0	chr3	147593846	147599956	(50695603)	C	L1PA5	LINE/L1	(8)	6319	177	2710988
2560	7.1	0.0	0.3	chr3	149087576	149087886	(49207673)	C	AluSx1	SINE/Alu	(2)	310	1	2713031
18	14.6	2.6	0.0	chr3	149577990	149578027	(48717532)	+	(CCTC)n	Simple_repeat	1	39	(0)	2713849
36	16.3	3.1	4.0	chr3	149970880	149970975	(48324584)	+	(GCG)n	Simple_repeat	1	99	(0)	2714495
13	9.6	0.0	0.0	chr3	149971187	149971209	(48324350)	+	(GCGT)n	Simple_repeat	1	23	(0)	2714496
2315	12.3	0.0	0.0	chr3	150329223	150329531	(47966028)	+	AluSz	SINE/Alu	1	309	(3)	2715051
3433	14.2	7.7	5.9	chr3	150329542	150330304	(47965255)	+	L1MB7	LINE/L1	5395	6172	(12)	2715052
12670	8.6	0.4	1.9	chr3	150711839	150715877	(47579682)	+	L1P3	LINE/L1	5	4018	(2443)	2715716
311	18.6	0.0	7.9	chr3	151094543	151094618	(47200941)	+	L1MC5a	LINE/L1	2674	2743	(34)	2716342
12085	12.1	2.4	1.6	chr3	151884686	151887320	(46408239)	+	L1P3	LINE/L1	8	2493	(4006)	2717407
14921	9.8	0.7	1.2	chr3	156000001	156004549	(42291010)	C	L1P3	LINE/L1	(1942)	4519	1	2723424
369	28.5	11.5	3.0	chr3	157806294	157806449	(40489110)	C	MIRb	SINE/MIR	(7)	261	97	2725974
328	24.0	1.0	5.7	chr3	157806567	157806672	(40488887)	C	Charlie7a	DNA/hAT-Charlie	(1)	271	171	2725975
1026	26.3	6.7	5.3	chr3	157806692	157807144	(40488415)	C	Charlie7	DNA/hAT-Charlie	(1928)	684	225	2725976
27040	3.0	0.6	0.4	chr3	158511109	158517123	(39778436)	C	L1PA3	LINE/L1	(3)	6152	124	2726901
808	26.1	13.2	12.2	chr3	158517126	158517596	(39777963)	C	L1ME3E	LINE/L1	(1713)	4433	3922	2726897
13615	17.3	4.4	2.0	chr3	160113982	160116404	(38179155)	+	L1PA8	LINE/L1	14	2504	(5061)	2729302
4440	16.2	6.5	1.4	chr3	160554449	160555262	(37740297)	+	MER21B	LTR/ERVL	1	859	(9)	2729985
2544	10.5	3.7	0.3	chr3	161591584	161591945	(36703614)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2731574
1754	16.0	8.6	3.7	chr3	161716576	161716951	(36578608)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2731759
3206	18.8	2.0	3.0	chr3	161716952	161717334	(36578225)	C	L1MB2	LINE/L1	(309)	5862	5483	2731758
22968	10.6	1.6	1.9	chr3	164339497	164341383	(33954176)	C	HERVS71-int	LTR/ERV1	(7121)	1857	5	2734778
3568	7.4	8.4	0.0	chr3	164341387	164341897	(33953662)	C	LTR6B	LTR/ERV1	(0)	558	1	2734778
10246	5.0	1.7	4.2	chr3	164783893	164785312	(33510247)	+	SVA_B	Retroposon/SVA	1	1383	(0)	2735365
1503	20.0	5.2	0.0	chr3	164946611	164946885	(33348674)	+	AluJb	SINE/Alu	1	290	(22)	2735584
5442	19.5	3.9	6.2	chr3	164946886	164947009	(33348550)	+	L1MC2	LINE/L1	4382	4487	(1659)	2735583
22908	8.3	1.4	0.2	chr3	165134419	165140504	(33155055)	C	L1PA5	LINE/L1	(5)	6149	4	2735816
18432	19.1	3.4	1.5	chr3	165766842	165769120	(32526439)	C	L1M1	LINE/L1	(5209)	2356	16	2736674
363	25.4	3.0	11.6	chr3	166864577	166864723	(31430836)	+	MER52D	LTR/ERV1	360	493	(1630)	2738023
5461	21.1	15.0	2.0	chr3	166864951	166866369	(31429190)	+	MER52D	LTR/ERV1	481	2115	(8)	2738023
25485	6.8	0.2	0.9	chr3	167129353	167135528	(31160031)	+	L1PA5	LINE/L1	1	6150	(4)	2738353
1121	14.0	2.2	0.0	chr3	167820009	167820186	(30475373)	C	MLT1B	LTR/ERVL-MaLR	(5)	385	204	2739206
8151	15.2	14.0	2.4	chr3	167820205	167821751	(30473808)	+	MER52A	LTR/ERV1	1	1755	(0)	2739207
5568	10.5	0.6	0.0	chr3	169567926	169568732	(28726827)	+	L1PA7	LINE/L1	8	819	(5642)	2741499
25	19.9	0.0	0.0	chr3	169659073	169659119	(28636440)	+	A-rich	Low_complexity	1	47	(0)	2741625
345	25.0	16.2	0.0	chr3	169847677	169847836	(28447723)	+	MER113	DNA/hAT-Charlie	330	520	(1)	2741911
1806	14.8	1.4	2.0	chr3	170236594	170236890	(28058669)	+	AluJr	SINE/Alu	14	308	(4)	2742635
4283	8.8	1.1	3.7	chr3	170320394	170320825	(27974734)	C	MER41A	LTR/ERV1	(131)	423	1	2742816
610	18.6	3.7	8.2	chr3	170320826	170320995	(27974564)	+	MER21B	LTR/ERVL	683	844	(24)	2742820
27	0.0	3.3	0.0	chr3	170320999	170321028	(27974531)	+	(TGTTT)n	Simple_repeat	1	31	(0)	2742821
526	19.1	6.8	2.9	chr3	171649785	171649924	(26645635)	+	L1ME4c	LINE/L1	449	594	(236)	2744878
26	17.6	0.0	3.3	chr3	172039625	172039685	(26255874)	+	(GCG)n	Simple_repeat	1	61	(0)	2745520
23243	8.4	0.8	1.0	chr3	173381850	173388281	(24907278)	+	L1PA7	LINE/L1	1	6464	(5)	2747496
49834	14.3	1.7	0.5	chr3	176506384	176514454	(21781105)	C	HUERS-P3-int	LTR/ERV1	(0)	8919	750	2751774
12	24.9	2.0	3.9	chr3	179148365	179148415	(19147144)	+	(TGC)n	Simple_repeat	1	52	(0)	2755688
18	28.2	1.3	2.6	chr3	179148416	179148454	(19147105)	+	(CCGCTG)n	Simple_repeat	5	92	(0)	2755689
12	5.5	0.0	0.0	chr3	179148530	179148548	(19147011)	+	(CGC)n	Simple_repeat	1	19	(0)	2755690
1117	6.8	1.3	0.0	chr3	179725883	179726029	(18569530)	C	THE1B	LTR/ERVL-MaLR	(215)	149	1	2756771
275	33.2	10.0	0.3	chr3	179726031	179726338	(18569221)	C	L2a	LINE/L2	(154)	3272	2932	2756770
23929	7.1	0.7	0.2	chr3	181585392	181591552	(16704007)	C	L1PA5	LINE/L1	(0)	6154	4	2759560
8792	12.7	1.1	0.5	chr3	181591528	181593075	(16702484)	C	L1P4	LINE/L1	(628)	5526	3974	2759561
15	0.0	0.0	0.0	chr3	182980542	182980560	(15314999)	+	(CGG)n	Simple_repeat	1	19	(0)	2761871
20	15.5	2.3	0.0	chr3	182980714	182980756	(15314803)	+	G-rich	Low_complexity	1	44	(0)	2761872
589	20.3	9.8	0.7	chr3	182986578	182986726	(15308833)	+	MER21C	LTR/ERVL	432	595	(343)	2761880
508	32.2	11.1	2.8	chr3	184560544	184561297	(13734262)	+	L2a	LINE/L2	2534	3424	(2)	2764910
2142	9.8	0.0	0.0	chr3	187347482	187347758	(10947801)	C	AluSg7	SINE/Alu	(32)	277	1	2770010
3481	15.2	3.4	2.6	chr3	187347759	187348683	(10946876)	C	L1MA7	LINE/L1	(471)	5820	4874	2770008
15651	7.4	1.7	0.2	chr3	187512729	187514886	(10780673)	+	L1P2	LINE/L1	4	2194	(3990)	2770255
14	12.0	8.3	0.0	chr3	194686776	194686811	(3608748)	+	(CCG)n	Simple_repeat	1	39	(0)	2781657
10671	5.0	1.7	1.2	chr3	195599157	195600516	(2695043)	C	SVA_C	Retroposon/SVA	(17)	1367	1	2783343
22	0.0	0.0	0.0	chr3	195838221	195838244	(2457315)	+	(AC)n	Simple_repeat	1	24	(0)	2783712
193	15.4	29.7	0.0	chr3	195957455	195957532	(2338027)	+	MER5A	DNA/hAT-Charlie	77	187	(2)	2783937
1564	10.9	1.4	0.5	chr3	195957558	195957778	(2337781)	C	AluSq	SINE/Alu	(5)	308	86	2783938
1929	10.3	0.0	6.0	chr3	196418984	196419324	(1876235)	+	AluSx1	SINE/Alu	1	312	(0)	2784963
226	25.0	0.0	0.0	chr4	57579	57626	(190156929)	C	L2c	LINE/L2	(59)	3328	3281	2788572
4533	15.3	9.7	6.7	chr4	95297	96112	(190118443)	+	MER61-int	LTR/ERV1	4	866	(4351)	2788625
1471	16.6	7.8	0.0	chr4	675665	675972	(189538583)	+	MER1B	DNA/hAT-Charlie	1	334	(5)	2789394
11	16.9	5.8	5.5	chr4	792118	792169	(189422386)	+	(CGCCCCA)n	Simple_repeat	1	55	(0)	2789528
13	31.3	0.0	0.0	chr4	792499	792545	(189422010)	+	(CTC)n	Simple_repeat	1	47	(0)	2789529
1097	29.6	14.4	2.7	chr4	809622	810043	(189404512)	C	L1ME1	LINE/L1	(3)	6331	5677	2789558
2618	5.9	0.0	0.0	chr4	810044	810348	(189404207)	C	AluY	SINE/Alu	(6)	305	1	2789559
2036	24.3	6.7	0.1	chr4	1277887	1278783	(188935772)	C	L1MB5	LINE/L1	(133)	6041	5080	2790058
1578	22.7	9.2	0.4	chr4	1307541	1307995	(188906560)	C	MLT2B2	LTR/ERVL	(15)	500	2	2790105
1556	22.4	4.9	0.3	chr4	1308007	1308338	(188906217)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	1	2790106
16	19.1	5.5	5.2	chr4	1502497	1502569	(188711986)	+	GA-rich	Low_complexity	1	77	(0)	2790257
308	35.1	9.7	0.6	chr4	1518354	1518522	(188696033)	+	L1MB8	LINE/L1	5811	5996	(188)	2790275
454	21.6	10.3	0.0	chr4	1518525	1518663	(188695892)	+	L1MB8	LINE/L1	6022	6176	(2)	2790275
320	27.1	8.1	4.0	chr4	1541467	1541643	(188672912)	C	L1MB5	LINE/L1	(0)	6174	5990	2790293
225	22.5	6.6	4.0	chr4	1541761	1541834	(188672721)	C	L1MB5	LINE/L1	(298)	5885	5810	2790293
2592	14.9	3.7	0.9	chr4	1738560	1739026	(188475529)	C	LTR10A	LTR/ERV1	(66)	543	61	2790557
238	29.4	4.0	1.6	chr4	2583801	2583921	(187630634)	C	L1MCa	LINE/L1	(6270)	153	30	2791869
926	26.3	7.8	0.3	chr4	2583942	2584239	(187630316)	C	L1M5	LINE/L1	(964)	5182	4861	2791875
1294	9.5	0.6	0.0	chr4	2584273	2584441	(187630114)	+	AluSx	SINE/Alu	129	298	(14)	2791876
13022	9.1	0.6	1.6	chr4	2921428	2923602	(187290953)	C	L1PA7	LINE/L1	(4310)	2189	1	2792449
360	31.4	6.2	0.8	chr4	2923687	2923877	(187290678)	C	MIRb	SINE/MIR	(2)	260	59	2792452
1532	17.2	7.0	0.3	chr4	3290251	3290545	(186924010)	C	L1MB3	LINE/L1	(42)	6141	5828	2793020
28342	2.5	0.2	0.1	chr4	4953898	4959919	(185254636)	C	L1PA2	LINE/L1	(1)	6154	126	2795775
325	22.7	2.5	1.2	chr4	4959921	4960050	(185254505)	C	L1ME1	LINE/L1	(2185)	4134	4006	2795772
793	24.2	5.8	0.5	chr4	6222539	6222733	(183991822)	C	MLT1J	LTR/ERVL-MaLR	(117)	395	190	2797980
329	31.5	0.0	4.3	chr4	6372898	6372981	(183841574)	+	MIR	SINE/MIR	73	154	(108)	2798251
485	28.8	17.7	8.0	chr4	6372982	6373381	(183841174)	+	MLT1J2	LTR/ERVL-MaLR	1	447	(1)	2798252
195	28.4	4.0	1.0	chr4	7111908	7112003	(183102552)	C	MIR3	SINE/MIR	(77)	131	33	2799618
295	23.8	2.9	4.7	chr4	7211031	7211136	(183003419)	C	MamGypLTR1a	LTR/Gypsy	(3)	781	678	2799808
27	0.0	0.0	0.0	chr4	7211221	7211246	(183003309)	+	(GGGA)n	Simple_repeat	1	26	(0)	2799809
2080	10.6	5.7	0.0	chr4	7211389	7211672	(183002883)	C	AluSx1	SINE/Alu	(11)	301	1	2799810
11	20.9	6.8	0.0	chr4	7983761	7983804	(182230751)	+	(GCAGGCT)n	Simple_repeat	1	47	(0)	2801041
2484	0.5	0.0	0.0	chr4	7994775	7995173	(182219382)	+	L1HS	LINE/L1	5091	5489	(666)	2801061
198	32.5	1.2	4.8	chr4	7995208	7995291	(182219264)	+	L2c	LINE/L2	3266	3346	(41)	2801062
377	32.4	7.5	8.2	chr4	8170052	8170468	(182044087)	+	ERVL-E-int	LTR/ERVL	4731	5144	(523)	2801344
284	30.4	5.4	6.7	chr4	8170903	8170965	(182043590)	+	LTR16E2	LTR/ERVL	276	332	(236)	2801345
1767	17.9	8.5	14.4	chr4	8555685	8555802	(181658753)	+	Tigger2a	DNA/TcMar-Tigger	345	434	(0)	2801938
570	33.3	10.7	6.1	chr4	8637925	8638099	(181576456)	+	L1M5	LINE/L1	2927	3106	(3040)	2802065
2234	11.9	0.0	0.3	chr4	8638100	8638401	(181576154)	+	AluSx1	SINE/Alu	10	310	(2)	2802067
1159	25.1	6.1	2.9	chr4	8785510	8785952	(181428603)	+	MLT1C	LTR/ERVL-MaLR	4	461	(6)	2802300
3278	10.7	0.2	0.4	chr4	9068498	9068947	(181145608)	+	LTR6B	LTR/ERV1	110	558	(0)	2802699
22365	13.7	1.4	0.3	chr4	9068950	9072144	(181142411)	+	HERVS71-int	LTR/ERV1	4	3236	(5742)	2802699
1272	20.4	2.5	3.9	chr4	9079278	9079557	(181134998)	C	AluJr	SINE/Alu	(36)	276	1	2802708
4316	8.4	0.2	0.2	chr4	9599829	9600386	(180614169)	+	LTR6B	LTR/ERV1	1	558	(0)	2803282
21898	13.9	2.1	0.6	chr4	9600389	9603574	(180610981)	+	HERVS71-int	LTR/ERV1	4	3236	(5742)	2803282
18031	9.3	2.2	2.4	chr4	10423437	10428533	(179786022)	C	L1P3	LINE/L1	(1316)	5145	4	2804414
17	3.4	6.5	0.0	chr4	10428537	10428552	(179786003)	+	(ATT)n	Simple_repeat	1	16	(0)	2804415
1797	15.9	0.0	4.7	chr4	10428553	10428853	(179785702)	C	AluJb	SINE/Alu	(25)	287	1	2804416
8558	19.7	3.9	3.2	chr4	13430217	13433247	(176781308)	+	L1PA17	LINE/L1	353	3171	(3744)	2809316
6655	24.7	11.6	2.8	chr4	16338448	16339463	(173875092)	C	L1ME3A	LINE/L1	(578)	5584	4472	2814176
325	24.6	3.4	7.4	chr4	17704435	17704640	(172509915)	C	MIR	SINE/MIR	(33)	235	33	2816760
15	25.4	1.8	3.5	chr4	17704912	17704968	(172509587)	+	GA-rich	Low_complexity	1	58	(0)	2816761
23133	7.1	1.4	1.1	chr4	20738626	20744778	(169469777)	+	L1PA5	LINE/L1	7	6152	(2)	2821349
320	29.7	5.1	0.9	chr4	24949508	24949619	(165264936)	C	L2b	LINE/L2	(0)	3375	3259	2828025
181	26.8	1.8	0.0	chr4	25996028	25996083	(164218472)	+	L2a	LINE/L2	3368	3424	(2)	2830174
28397	2.2	0.0	0.0	chr4	27070204	27076264	(163138291)	C	L1PA2	LINE/L1	(0)	6155	124	2832031
1121	25.5	2.5	9.0	chr4	27076266	27076433	(163138122)	+	L1M5	LINE/L1	5270	5429	(814)	2832030
5298	21.8	4.7	1.6	chr4	28292379	28294350	(161920205)	+	L1MC1	LINE/L1	3875	5998	(510)	2833794
22640	14.2	1.2	6.0	chr4	29929315	29932159	(160282396)	+	L1PA7	LINE/L1	2	2640	(3821)	2836043
3995	20.9	3.2	3.7	chr4	30335726	30336561	(159877994)	C	MER21B	LTR/ERVL	(34)	834	3	2836580
2122	10.0	0.7	0.0	chr4	31198417	31198687	(159015868)	+	AluSq2	SINE/Alu	41	313	(0)	2837748
2289	10.2	5.9	3.2	chr4	31198688	31198966	(159015589)	C	THE1A	LTR/ERVL-MaLR	(55)	300	1	2837747
10389	11.4	3.3	0.0	chr4	31198967	31200494	(159014061)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2837747
6846	11.6	9.4	0.7	chr4	36894897	36896654	(153317901)	+	HUERS-P3b-int	LTR/ERV1	747	2658	(4760)	2845364
9600	4.8	0.1	13.7	chr4	44181204	44182803	(146031752)	+	SVA_C	Retroposon/SVA	2	1383	(1)	2857927
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
406	18.9	2.2	0.5	chr4	49573746	49573848	(140640707)	+	MSTA	LTR/ERVL-MaLR	4	113	(262)	2865274
271	21.9	1.9	0.4	chr4	49573937	49574021	(140640534)	+	THE1D-int	LTR/ERVL-MaLR	959	1064	(587)	2865275
839	22.6	15.8	2.1	chr4	49573984	49574223	(140640332)	C	THE1D-int	LTR/ERVL-MaLR	(398)	1233	955	2865276
867	26.6	5.5	4.6	chr4	49574228	49574534	(140640021)	+	MSTA	LTR/ERVL-MaLR	76	385	(43)	2865274
290	20.4	3.1	1.2	chr4	49577303	49577392	(140637163)	C	HSAT5	Satellite	(7)	91	1	2865282
285	26.1	0.0	1.8	chr4	49577533	49577634	(140636921)	C	HSAT5	Satellite	(1)	100	1	2865283
639	7.7	0.0	0.6	chr4	49577855	49577952	(140636603)	C	HSAT5	Satellite	(3)	97	1	2865284
22251	12.7	2.7	2.6	chr4	52086265	52092676	(138121879)	C	L1PA7	LINE/L1	(4)	6465	10	2865709
279	32.4	7.0	0.5	chr4	52473864	52474122	(137740433)	+	L1MB7	LINE/L1	35	341	(5968)	2866231
373	26.4	11.2	0.6	chr4	52474263	52474430	(137740125)	+	LTR16A	LTR/ERVL	260	447	(4)	2866232
4937	23.7	4.4	3.1	chr4	52474450	52476744	(137737811)	+	L1MB7	LINE/L1	3716	6043	(314)	2866231
25163	6.8	1.0	0.1	chr4	52768174	52774291	(137440264)	C	L1PA5	LINE/L1	(1)	6153	4	2866735
1733	22.7	7.0	11.8	chr4	52800938	52801646	(137412909)	+	L1MC	LINE/L1	3579	4250	(1896)	2866800
24193	10.4	0.7	1.2	chr4	52801651	52808184	(137406371)	+	L1PA8	LINE/L1	1	6486	(1)	2866801
930	25.9	9.5	1.6	chr4	52857013	52857333	(137357222)	C	MLT1K	LTR/ERVL-MaLR	(10)	585	237	2866887
24745	5.0	0.1	0.1	chr4	53297966	53304112	(136910443)	+	L1PA4	LINE/L1	7	6155	(0)	2867498
50	0.0	0.0	0.0	chr4	54421009	54421051	(135793504)	+	(TG)n	Simple_repeat	1	43	(0)	2869276
188	40.0	0.0	0.0	chr4	54421279	54421338	(135793217)	C	L2a	LINE/L2	(26)	3400	3341	2869277
416	26.4	2.3	1.6	chr4	54450769	54450895	(135763660)	+	MIRb	SINE/MIR	97	224	(44)	2869326
12679	9.5	1.5	2.5	chr4	54450898	54453929	(135760626)	+	L1P3	LINE/L1	1	3048	(3413)	2869327
18384	8.2	4.1	1.0	chr4	55164276	55170237	(135044318)	C	L1PA6	LINE/L1	(0)	6154	5	2870453
264	15.5	9.0	2.7	chr4	55170247	55170319	(135044236)	C	L1ME1	LINE/L1	(230)	5949	5872	2870452
1156	16.5	0.0	0.0	chr4	55170323	55170498	(135044057)	C	AluSz6	SINE/Alu	(0)	312	137	2870454
22765	7.9	0.9	0.3	chr4	55297162	55303286	(134911269)	+	L1PA6	LINE/L1	178	6325	(2)	2870639
25544	4.0	0.5	0.1	chr4	56362751	56368879	(133845676)	+	L1PA4	LINE/L1	1	6155	(0)	2872486
23892	8.0	0.7	0.4	chr4	59891984	59898112	(130316443)	+	L1PA5	LINE/L1	4	6136	(18)	2877545
13	25.2	0.0	0.0	chr4	60080918	60080955	(130133600)	+	(ACATAAT)n	Simple_repeat	1	38	(0)	2877758
17637	12.9	2.1	1.1	chr4	60081022	60086144	(130128411)	+	L1PA8	LINE/L1	6	5153	(1308)	2877759
1584	16.7	0.0	1.5	chr4	60794507	60794767	(129419788)	+	MER1B	DNA/hAT-Charlie	1	257	(82)	2878568
1294	21.1	4.5	7.0	chr4	60794800	60795141	(129419414)	+	MLT1A	LTR/ERVL-MaLR	42	374	(0)	2878569
27155	3.3	0.1	0.0	chr4	60831274	60837284	(129377271)	C	L1PA3	LINE/L1	(2)	6153	137	2878630
393	30.1	12.4	1.8	chr4	61258385	61258607	(128955948)	+	MIRb	SINE/MIR	8	257	(11)	2879181
24852	6.8	0.5	0.1	chr4	63333602	63339723	(126874832)	+	L1PA4	LINE/L1	1	6152	(3)	2881891
9265	6.5	0.9	9.6	chr4	64036670	64038133	(126176422)	+	SVA_B	Retroposon/SVA	48	1383	(0)	2882689
7430	19.1	2.5	1.5	chr4	64715927	64718914	(125495641)	C	HUERS-P3-int	LTR/ERV1	(4237)	4682	1	2883492
27765	2.1	0.0	0.0	chr4	65288238	65294261	(124920294)	C	L1PA2	LINE/L1	(5)	6150	127	2884202
13	18.2	0.0	4.9	chr4	65670313	65670353	(124544202)	+	(GCTGAGG)n	Simple_repeat	1	41	(0)	2884662
21055	10.3	2.5	0.6	chr4	65724682	65730733	(124483822)	+	L1PA7	LINE/L1	5	6153	(1)	2884746
22952	8.7	0.9	0.3	chr4	67268219	67274336	(122940219)	C	L1PA6	LINE/L1	(7)	6147	5	2886696
22587	10.5	0.8	3.0	chr4	67410564	67413202	(122801353)	C	L1PA7	LINE/L1	(3831)	2630	1	2886879
946	14.8	0.0	0.0	chr4	67413203	67413337	(122801218)	C	AluJb	SINE/Alu	(177)	135	1	2886882
27863	2.2	0.0	0.0	chr4	67967415	67973442	(122241113)	C	L1PA2	LINE/L1	(2)	6153	125	2887743
3235	11.2	1.2	0.8	chr4	67973444	67973937	(122240618)	C	L1PA10	LINE/L1	(1)	6167	5672	2887744
2358	10.7	0.0	0.7	chr4	68193665	68193974	(122020581)	+	AluSx1	SINE/Alu	1	308	(4)	2888007
26893	4.6	0.2	0.1	chr4	68194059	68200204	(122014351)	+	L1PA2	LINE/L1	1	6154	(1)	2888008
1229	15.1	14.7	1.8	chr4	68399228	68399666	(121814889)	+	MER21A	LTR/ERVL	1	501	(367)	2888297
94	12.0	1.3	0.0	chr4	68399689	68399838	(121814717)	+	(TTCC)n	Simple_repeat	1	152	(0)	2888300
9033	18.1	2.5	1.0	chr4	68966472	68968071	(121246484)	C	THE1D-int	LTR/ERVL-MaLR	(5)	1626	3	2888904
278	14.9	0.0	0.0	chr4	68968074	68968120	(121246435)	C	THE1D	LTR/ERVL-MaLR	(0)	381	335	2888904
1826	17.1	5.2	2.0	chr4	68968122	68968473	(121246082)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2888905
24552	9.7	1.4	0.3	chr4	69221223	69224656	(120989899)	C	HERV30-int	LTR/ERV1	(4795)	3462	1	2889178
6748	14.7	6.8	11.2	chr4	69575241	69576821	(120637734)	C	LTR12C	LTR/ERV1	(0)	1579	74	2889532
23910	7.5	0.6	0.2	chr4	70207216	70213358	(120001197)	C	L1PA6	LINE/L1	(0)	6154	1	2890325
262	28.8	4.8	0.8	chr4	70213366	70213484	(120001071)	C	L1M4a1	LINE/L1	(1487)	1092	969	2890326
262	27.9	2.8	0.9	chr4	71011997	71012101	(119202454)	C	L1ME4a	LINE/L1	(12)	6112	6006	2891658
24457	5.7	0.3	0.5	chr4	71012179	71017935	(119196620)	+	L1PA5	LINE/L1	399	6148	(6)	2891659
23360	8.0	0.7	0.2	chr4	71791667	71797803	(118416752)	C	L1PA6	LINE/L1	(0)	6327	179	2892671
5893	14.1	2.9	0.5	chr4	72163165	72163778	(118050777)	C	L1PA17	LINE/L1	(1737)	4409	3775	2893165
26004	5.2	0.1	0.0	chr4	72230868	72237005	(117977550)	C	L1PA4	LINE/L1	(0)	6155	14	2893250
22067	8.3	1.1	0.2	chr4	72847668	72852890	(117361665)	+	L1PA6	LINE/L1	4	6150	(4)	2894010
1035	15.0	0.9	9.7	chr4	72866104	72866495	(117348060)	+	THE1C	LTR/ERVL-MaLR	1	315	(60)	2894027
11670	10.2	1.1	0.3	chr4	72866508	72867246	(117347309)	+	L1PA7	LINE/L1	8	765	(5696)	2894028
15872	8.3	1.0	0.5	chr4	73319411	73320851	(116893704)	+	L1PA5	LINE/L1	2	1453	(4702)	2894743
22501	8.1	0.8	0.4	chr4	75074259	75080389	(115134166)	C	L1PA6	LINE/L1	(18)	6136	5	2897075
15366	8.6	1.5	0.2	chr4	75313478	75317758	(114896797)	+	L1PA5	LINE/L1	4	4328	(1818)	2897306
5327	5.0	1.9	0.3	chr4	75317760	75318473	(114896082)	+	SVA_B	Retroposon/SVA	658	1383	(0)	2897307
22734	9.5	2.4	0.5	chr4	75378235	75384034	(114830521)	+	L1PA5	LINE/L1	11	5928	(226)	2897387
10748	12.0	2.9	1.0	chr4	76287263	76291049	(113923506)	C	L1PA8	LINE/L1	(2624)	3837	20	2899020
676	31.9	8.2	0.6	chr4	77377021	77377336	(112837219)	C	LTR16A	LTR/ERVL	(88)	363	22	2900673
14	20.5	0.0	0.0	chr4	77819421	77819454	(112395101)	+	(AGACGC)n	Simple_repeat	1	34	(0)	2901222
52	24.4	4.5	3.9	chr4	77819601	77819760	(112394795)	+	(GCG)n	Simple_repeat	1	220	(13)	2901223
9592	5.8	1.8	0.1	chr4	78006566	78007887	(112206668)	C	SVA_B	Retroposon/SVA	(0)	1383	40	2901556
16	16.6	0.0	0.0	chr4	78939644	78939670	(111274885)	+	(T)n	Simple_repeat	1	27	(0)	2902973
7225	4.7	1.0	23.9	chr4	79244643	79246390	(110968165)	+	SVA_B	Retroposon/SVA	40	1383	(0)	2903376
20944	9.2	1.1	0.4	chr4	80439254	80445682	(109768873)	+	L1PA7	LINE/L1	8	6466	(3)	2904824
21455	9.9	1.9	2.7	chr4	81714939	81720512	(108494043)	+	L1PA7	LINE/L1	1	5626	(835)	2906564
14296	21.0	3.5	1.8	chr4	84259244	84262148	(105952407)	+	L1PB4	LINE/L1	1377	4192	(2723)	2910883
1331	5.7	0.0	1.9	chr4	84862707	84862865	(105351690)	+	AluY	SINE/Alu	2	157	(154)	2911729
3746	17.0	1.9	3.4	chr4	84862870	84863610	(105350945)	C	L1MA9	LINE/L1	(319)	5993	5264	2911730
21605	7.2	0.1	0.1	chr4	85848603	85853614	(104360941)	C	L1PA6	LINE/L1	(1150)	4996	1	2913069
14	0.0	0.0	0.0	chr4	86594582	86594599	(103619956)	+	(GAG)n	Simple_repeat	1	18	(0)	2914076
273	30.1	10.4	4.5	chr4	87775512	87775863	(102438692)	+	L1ME4a	LINE/L1	5745	6119	(5)	2916038
37	0.0	8.2	0.0	chr4	88457551	88457599	(101756956)	+	(TGTGAGGGC)n	Simple_repeat	1	53	(0)	2917211
767	27.0	5.2	1.0	chr4	89108196	89108397	(101106158)	+	LTR18A	LTR/ERVL	1	211	(146)	2918125
421	22.5	4.4	12.7	chr4	89108384	89108553	(101106002)	+	LTR18A	LTR/ERVL	351	500	(114)	2918125
62	0.0	0.0	0.0	chr4	89108554	89108606	(101105949)	+	(AG)n	Simple_repeat	1	53	(0)	2918127
462	22.5	4.3	12.6	chr4	89108607	89108711	(101105844)	+	LTR18A	LTR/ERVL	254	357	(0)	2918125
537	11.5	1.3	0.0	chr4	89108754	89108831	(101105724)	+	MER21C	LTR/ERVL	788	866	(72)	2918128
1790	16.2	2.9	1.0	chr4	89108916	89109220	(101105335)	C	L1MC1	LINE/L1	(0)	6333	6023	2918129
16	23.3	2.2	0.0	chr4	89307845	89307889	(100906666)	+	(GCC)n	Simple_repeat	1	46	(0)	2918454
19	14.8	0.0	2.5	chr4	89308014	89308053	(100906502)	+	(GGC)n	Simple_repeat	1	40	(0)	2918455
11644	13.7	7.3	0.9	chr4	89609507	89613536	(100601019)	+	L1PBa	LINE/L1	114	4462	(2400)	2918882
24274	7.6	0.5	0.1	chr4	90699988	90706061	(99508494)	C	L1PA5	LINE/L1	(0)	6327	235	2920307
25995	5.3	0.6	0.0	chr4	91858349	91864459	(98350096)	C	L1PA4	LINE/L1	(11)	6144	1	2921619
27264	3.0	0.1	0.1	chr4	93589054	93595080	(96619475)	C	L1PA3	LINE/L1	(3)	6152	124	2923851
684	26.8	3.2	2.1	chr4	93595397	93595583	(96618972)	+	MIRb	SINE/MIR	64	252	(16)	2923852
230	27.6	12.1	1.1	chr4	94333338	94333425	(95881130)	+	MLT1J	LTR/ERVL-MaLR	177	275	(237)	2924829
4244	28.6	13.7	7.2	chr4	95253674	95254463	(94960092)	+	L2	LINE/L2	89	894	(2525)	2926173
225	23.7	3.3	0.0	chr4	95254464	95254522	(94960033)	+	MER5B	DNA/hAT-Charlie	116	176	(2)	2926174
4244	28.6	13.7	7.2	chr4	95254523	95254534	(94960021)	+	L2	LINE/L2	895	908	(2511)	2926173
606	24.4	3.1	1.9	chr4	95254535	95254693	(94959862)	+	MER5A1	DNA/hAT-Charlie	3	163	(3)	2926175
11444	10.5	0.9	0.0	chr4	96468080	96469645	(93744910)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2927715
18023	11.7	3.1	3.7	chr4	98533850	98537452	(91677103)	C	L1PA7	LINE/L1	(2848)	3613	3	2930287
364	32.5	10.8	0.0	chr4	98537472	98537637	(91676918)	C	MIR	SINE/MIR	(5)	257	72	2930289
3787	11.0	0.6	0.4	chr4	99109435	99109954	(91104601)	C	LTR17	LTR/ERV1	(0)	780	260	2931261
1452	25.4	12.4	4.5	chr4	99109963	99110452	(91104103)	C	MLT1L	LTR/ERVL-MaLR	(61)	549	16	2931262
22638	12.5	1.4	2.5	chr4	99242230	99248672	(90965883)	C	L1PA7	LINE/L1	(6)	6463	5	2931430
492	30.7	9.6	7.6	chr4	99248678	99249008	(90965547)	C	L1M5	LINE/L1	(323)	5801	5443	2931431
931	14.3	3.8	3.3	chr4	99472278	99472487	(90742068)	+	L1M4b	LINE/L1	1346	1556	(5311)	2931724
1638	18.6	14.4	0.6	chr4	99472488	99472828	(90741727)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2931725
2297	24.4	15.7	0.5	chr4	99472833	99473412	(90741143)	C	MSTD-int	LTR/ERVL-MaLR	(4)	1731	1064	2931725
21625	9.8	1.2	0.5	chr4	99698755	99705199	(90509356)	+	L1PA7	LINE/L1	8	6464	(5)	2932002
22076	10.1	1.7	2.6	chr4	100900161	100906584	(89307971)	+	L1PA7	LINE/L1	1	6469	(0)	2933637
1416	11.0	3.5	3.5	chr4	101128169	101128422	(89086133)	+	L1MA5A	LINE/L1	6038	6291	(6)	2933936
22680	10.6	0.8	2.2	chr4	101128453	101130944	(89083611)	+	L1PA7	LINE/L1	8	2514	(3985)	2933937
23666	7.2	1.0	0.3	chr4	102477934	102482955	(87731600)	+	L1PA6	LINE/L1	17	5057	(1089)	2935738
264	38.1	8.1	4.9	chr4	102660821	102661470	(87553085)	+	L2c	LINE/L2	2702	3379	(8)	2935981
16731	7.4	2.0	0.2	chr4	102968559	102972366	(87242189)	+	L1P2	LINE/L1	3	3865	(2281)	2936432
15370	11.9	2.0	3.9	chr4	103785455	103787960	(86426595)	+	HUERS-P3b-int	LTR/ERV1	18	2403	(6516)	2937452
291	39.7	6.2	2.4	chr4	104724824	104725071	(85489484)	C	L2	LINE/L2	(2842)	577	320	2938553
11790	8.8	2.4	0.1	chr4	104960331	104961909	(85252646)	C	L1P2	LINE/L1	(4565)	1619	3	2938869
17380	7.2	3.1	0.1	chr4	105408932	105413479	(84801076)	+	L1PA6	LINE/L1	5	6152	(2)	2939426
25017	6.8	0.3	0.1	chr4	106535101	106541246	(83673309)	C	L1PA5	LINE/L1	(0)	6154	11	2940967
25330	6.4	0.1	0.0	chr4	106558089	106564232	(83650323)	C	L1PA4	LINE/L1	(0)	6155	7	2940991
23265	7.5	0.7	0.4	chr4	108993986	109000000	(81214555)	+	L1PA6	LINE/L1	5	6026	(128)	2944343
25077	6.9	1.1	0.3	chr4	109339608	109345718	(80868837)	+	L1PA3	LINE/L1	1	6154	(1)	2944777
13	19.3	0.0	10.2	chr4	109433779	109433789	(80780766)	+	(TCCC)n	Simple_repeat	1	58	(0)	2944950
13	20.3	4.3	2.0	chr4	109433790	109433836	(80780719)	+	(CCTCCCG)n	Simple_repeat	1	49	(0)	2944951
11	16.4	5.9	0.0	chr4	109560059	109560092	(80654463)	+	(GCTCTC)n	Simple_repeat	1	36	(0)	2945187
16	0.0	0.0	0.0	chr4	109560093	109560110	(80654445)	+	(T)n	Simple_repeat	1	18	(0)	2945188
9952	5.8	4.6	0.8	chr4	109603083	109604400	(80610155)	+	SVA_B	Retroposon/SVA	13	1383	(0)	2945238
13	24.0	1.9	3.7	chr4	110608996	110609048	(79605507)	+	GA-rich	Low_complexity	1	54	(0)	2946869
17374	3.6	0.2	0.0	chr4	110690113	110693684	(79520871)	C	L1HS	LINE/L1	(2444)	3702	127	2946950
27661	2.8	0.2	0.0	chr4	110870810	110876821	(79337734)	C	L1PA2	LINE/L1	(7)	6148	124	2947190
22927	9.2	0.9	0.8	chr4	111163727	111170181	(79044374)	+	L1PA7	LINE/L1	1	6466	(3)	2947528
16182	18.4	1.4	1.1	chr4	111482795	111484718	(78729837)	+	L1PA8A	LINE/L1	14	1952	(4833)	2947887
2083	7.7	0.0	5.6	chr4	112911226	112911511	(77303044)	+	AluY	SINE/Alu	1	270	(41)	2950103
761	15.6	1.5	7.8	chr4	112911512	112911619	(77302936)	C	FLAM_A	SINE/Alu	(36)	106	1	2950102
15287	7.9	0.4	0.1	chr4	113266889	113269091	(76945464)	C	L1PA7	LINE/L1	(640)	5829	3621	2950604
4772	9.4	0.5	0.0	chr4	113269090	113269738	(76944817)	C	L1PA7	LINE/L1	(5809)	652	1	2950604
5577	21.8	4.7	3.3	chr4	114216507	114217813	(75996742)	+	L1PREC2	LINE/L1	13	1338	(5447)	2951816
13874	10.8	2.4	1.8	chr4	114217808	114220007	(75994548)	+	L1PREC2	LINE/L1	3760	5971	(795)	2951816
6646	8.2	0.1	0.1	chr4	114615863	114616742	(75597813)	C	L1P1	LINE/L1	(5269)	886	7	2952275
23862	2.9	0.3	0.0	chr4	116775044	116781055	(73433500)	C	L1PA3	LINE/L1	(0)	6155	129	2954870
1997	12.1	6.8	5.6	chr4	116801378	116801753	(73412802)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2954893
4437	12.8	5.7	0.1	chr4	117921241	117921981	(72292574)	+	L1PA17	LINE/L1	3921	4705	(1441)	2956226
26942	3.6	0.4	0.1	chr4	117921984	117927986	(72286569)	+	L1PA3	LINE/L1	125	6145	(10)	2956227
1700	14.7	2.7	2.5	chr4	118881329	118881540	(71333015)	+	MLT1B	LTR/ERVL-MaLR	173	390	(0)	2957646
23560	7.4	0.8	0.2	chr4	119197687	119203154	(71011401)	+	L1PA6	LINE/L1	177	5657	(670)	2958107
8114	10.9	6.0	0.7	chr4	119236097	119237369	(70977186)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1074	2958164
1301	8.4	0.0	0.0	chr4	119237370	119237535	(70977020)	+	LSU-rRNA_Hsa	rRNA	4868	5033	(2)	2958165
17	18.5	0.0	0.0	chr4	119237536	119237566	(70976989)	+	A-rich	Low_complexity	1	31	(0)	2958166
5999	14.9	3.0	6.8	chr4	119237570	119238700	(70975855)	C	Tigger1	DNA/TcMar-Tigger	(1332)	1086	1	2958167
21	23.0	2.4	4.7	chr4	119627302	119627391	(70587164)	+	(CCGCG)n	Simple_repeat	1	87	(0)	2958740
769	21.8	2.0	12.4	chr4	120064403	120064627	(70149928)	+	MER20	DNA/hAT-Charlie	1	201	(18)	2959318
23142	7.0	1.0	0.0	chr4	121548525	121550814	(68663741)	C	L1PA6	LINE/L1	(3821)	2325	4	2961205
23298	7.5	1.0	0.6	chr4	121616232	121622378	(68592177)	+	L1PA6	LINE/L1	7	6153	(1)	2961303
13	19.6	0.0	0.0	chr4	122152490	122152519	(68062036)	+	(GCC)n	Simple_repeat	1	30	(0)	2962145
19696	10.8	1.2	0.7	chr4	123330662	123337152	(66877403)	C	L1PA7	LINE/L1	(8)	6461	6	2963797
24055	7.0	0.5	0.2	chr4	124008387	124014541	(66200014)	C	L1PA6	LINE/L1	(1)	6326	177	2964793
642	26.1	11.9	1.0	chr4	124681198	124681398	(65533157)	C	MIR	SINE/MIR	(8)	254	29	2965597
258	19.2	1.8	2.2	chr4	124681405	124681474	(65533081)	+	MER81	DNA/hAT-Blackjack	2	70	(2899)	2965598
1001	24.4	4.7	15.8	chr4	125031899	125032175	(65182380)	+	LTR40c	LTR/ERVL	2	234	(231)	2966055
530	12.7	0.0	0.0	chr4	125032176	125032254	(65182301)	+	MADE1	DNA/TcMar-Mariner	2	80	(0)	2966061
1001	24.4	4.7	15.8	chr4	125032255	125032501	(65182054)	+	LTR40c	LTR/ERVL	235	465	(0)	2966055
5813	9.7	1.4	2.5	chr4	125365800	125365851	(64848704)	C	L1PA13	LINE/L1	(8)	6155	6112	2966521
1645	12.4	14.5	0.0	chr4	125365852	125366141	(64848414)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	2966522
27702	2.4	0.1	0.1	chr4	127650221	127656245	(62558310)	C	L1PA2	LINE/L1	(0)	6155	128	2969365
205	34.6	0.0	0.0	chr4	128598666	128598766	(61615789)	C	L2	LINE/L2	(1001)	2418	2318	2970962
18	9.6	0.0	5.4	chr4	128812298	128812334	(61402221)	+	GA-rich	Low_complexity	1	37	(0)	2971409
13	18.8	0.0	8.0	chr4	128812373	128812422	(61402133)	+	(CGGCGCG)n	Simple_repeat	1	50	(0)	2971410
9257	10.0	1.9	3.7	chr4	133330360	133334605	(56879950)	C	L1PA7	LINE/L1	(5)	6149	8	2976856
22893	9.5	0.4	0.3	chr4	133991005	133994066	(56220489)	C	HERVK22-int	LTR/ERVK	(8)	6829	3764	2977574
2403	9.8	0.3	0.0	chr4	134847272	134847577	(55366978)	+	AluSp	SINE/Alu	1	307	(6)	2978593
22278	10.8	1.4	2.1	chr4	135467975	135474423	(54740132)	C	L1PA3	LINE/L1	(1)	6469	2	2979309
32838	14.6	8.5	6.8	chr4	135595581	135598203	(54616352)	+	HUERS-P3b-int	LTR/ERV1	17	2852	(6067)	2979465
24636	7.0	0.8	0.1	chr4	138354776	138360894	(51853661)	+	L1PA5	LINE/L1	5	6153	(1)	2982804
21940	9.4	1.2	2.8	chr4	138779671	138785591	(51428964)	C	L1PA7	LINE/L1	(31)	6438	644	2983348
19	0.0	0.0	0.0	chr4	138785675	138785695	(51428860)	+	(A)n	Simple_repeat	1	21	(0)	2983349
436	11.6	1.4	1.4	chr4	138785701	138785762	(51428793)	+	AluYj4	SINE/Alu	223	285	(26)	2983350
28	0.0	0.0	0.0	chr4	138785763	138785789	(51428766)	+	(AAAC)n	Simple_repeat	1	27	(0)	2983351
2851	8.6	0.0	0.0	chr4	138785796	138786192	(51428363)	C	L1PA7	LINE/L1	(6054)	407	11	2983348
275	17.2	5.9	0.0	chr4	138786201	138786264	(51428291)	+	MLT2B3	LTR/ERVL	494	561	(0)	2983347
13	26.1	1.6	4.8	chr4	138818738	138818798	(51395757)	+	GA-rich	Low_complexity	1	62	(0)	2983398
1710	11.8	6.2	8.4	chr4	138818814	138819109	(51395446)	+	AluSx1	SINE/Alu	6	294	(18)	2983399
32	22.3	0.0	1.2	chr4	139084411	139084490	(51130065)	+	(CGGCGG)n	Simple_repeat	1	80	(0)	2983898
318	19.3	28.6	3.5	chr4	139279715	139279859	(50934696)	C	MIR	SINE/MIR	(28)	234	39	2984349
16	5.2	0.0	0.0	chr4	139555180	139555199	(50659356)	+	(A)n	Simple_repeat	1	20	(0)	2984843
21720	12.0	3.5	3.1	chr4	141186705	141190284	(49024271)	C	L1PA8	LINE/L1	(2845)	3616	6	2987373
894	28.5	8.8	6.3	chr4	141887758	141888188	(48326367)	+	LTR33	LTR/ERVL	1	443	(72)	2988253
3811	20.8	3.3	0.6	chr4	141888254	141889080	(48325475)	C	L1MB8	LINE/L1	(5)	6173	5324	2988254
25864	5.1	0.4	0.1	chr4	143166457	143172590	(47041965)	+	L1PA4	LINE/L1	1	6149	(6)	2989895
17	20.7	3.3	3.2	chr4	143184775	143184834	(47029721)	+	G-rich	Low_complexity	1	62	(0)	2989909
35	2.8	0.0	0.0	chr4	143184837	143184873	(47029682)	+	(GGCGGAGG)n	Simple_repeat	1	37	(0)	2989910
472	31.4	4.4	2.5	chr4	143317708	143317864	(46896691)	C	MLT1O	LTR/ERVL-MaLR	(335)	207	48	2990134
2311	10.8	0.0	0.3	chr4	143317966	143318272	(46896283)	+	AluSx1	SINE/Alu	1	306	(6)	2990135
231	33.6	6.3	2.5	chr4	143821735	143821856	(46392699)	+	LTR88b	LTR/Gypsy?	97	223	(614)	2990791
2195	12.4	0.0	0.0	chr4	143821971	143822261	(46392294)	C	AluSz6	SINE/Alu	(20)	292	2	2990792
1116	28.3	7.2	3.3	chr4	144164167	144164619	(46049936)	C	L1PREC2	LINE/L1	(6450)	1705	1234	2991268
1440	15.5	1.3	0.0	chr4	144164619	144164850	(46049705)	C	L1PREC2	LINE/L1	(7919)	236	2	2991268
3151	24.6	8.0	1.2	chr4	144164849	144166078	(46048477)	C	L1MEg	LINE/L1	(2798)	4656	3335	2991264
586	30.1	5.7	8.3	chr4	147287088	147287377	(42927178)	C	LTR85a	LTR/Gypsy?	(1)	701	420	2995394
25	6.5	0.0	0.0	chr4	147683721	147683752	(42530803)	+	(T)n	Simple_repeat	1	32	(0)	2996023
296	34.3	0.6	3.9	chr4	149005173	149005234	(41209321)	C	L4_B_Mam	LINE/RTE-X	(3351)	1590	1533	2997891
1897	12.2	6.4	4.1	chr4	149005235	149005600	(41208955)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2997893
296	34.3	0.6	3.9	chr4	149005601	149005716	(41208839)	C	L4_B_Mam	LINE/RTE-X	(3409)	1532	1418	2997891
2339	13.9	2.0	0.8	chr4	151438020	151438418	(38776137)	C	LTR57	LTR/ERVL	(7)	404	1	3001504
333	25.2	1.0	2.0	chr4	152258570	152258670	(37955885)	C	MIR3	SINE/MIR	(57)	151	52	3002718
15562	18.3	5.0	1.9	chr4	152820800	152823498	(37391057)	+	L1PB3	LINE/L1	1435	4283	(2579)	3003640
1860	16.3	0.3	0.3	chr4	152997343	152997630	(37216925)	C	AluJb	SINE/Alu	(20)	292	5	3003859
403	29.5	5.2	4.3	chr4	152998217	152998425	(37216130)	C	L2a	LINE/L2	(6)	3420	3210	3003860
2315	10.3	0.3	0.0	chr4	153091671	153091971	(37122584)	+	AluSq4	SINE/Alu	1	302	(9)	3004013
1472	23.4	7.9	6.0	chr4	153091972	153092323	(37122232)	C	MLT1D	LTR/ERVL-MaLR	(135)	370	5	3004012
301	31.0	0.0	0.0	chr4	153092333	153092448	(37122107)	+	MIR	SINE/MIR	147	262	(0)	3004011
13	21.9	0.0	2.6	chr4	153344509	153344553	(36870002)	+	(CCCCAG)n	Simple_repeat	1	43	(0)	3004473
11	27.0	3.6	1.8	chr4	153344683	153344737	(36869818)	+	(CCCGCG)n	Simple_repeat	1	57	(0)	3004474
506	29.5	8.4	4.6	chr4	153756609	153756871	(36457684)	C	L2a	LINE/L2	(2)	3424	3151	3005147
591	29.4	12.8	5.0	chr4	153984711	153985132	(36229423)	C	HAL1	LINE/L1	(1769)	738	279	3005433
2001	16.6	0.7	0.0	chr4	153985244	153985551	(36229004)	C	AluJb	SINE/Alu	(2)	310	1	3005441
27329	2.8	0.2	0.1	chr4	156367270	156373295	(33841260)	+	L1PA3	LINE/L1	126	6155	(0)	3008704
4582	12.6	0.0	2.1	chr4	157785623	157786286	(32428269)	C	THE1D-int	LTR/ERVL-MaLR	(70)	1561	912	3010530
520	14.5	0.0	0.0	chr4	157786287	157786362	(32428193)	C	AluSq10	SINE/Alu	(237)	76	1	3010531
380	22.7	1.1	1.1	chr4	157786363	157786451	(32428104)	+	L2	LINE/L2	2481	2569	(850)	3010528
305	33.9	3.7	0.0	chr4	157786436	157786565	(32427990)	+	L2	LINE/L2	2731	2865	(554)	3010528
10179	3.4	0.4	14.3	chr4	158881409	158883015	(31331540)	+	SVA_C	Retroposon/SVA	2	1384	(0)	3012049
21075	6.7	0.3	0.2	chr4	159609415	159615539	(30599016)	C	L1PA5	LINE/L1	(2)	6152	22	3013160
1096	17.9	5.2	2.1	chr4	159615540	159615779	(30598776)	C	LTR19A	LTR/ERV1	(238)	248	1	3013159
12267	12.4	1.5	0.8	chr4	162965872	162970335	(27244220)	C	L1PA7	LINE/L1	(7)	6462	1	3017429
9418	18.9	1.5	1.3	chr4	163172959	163174784	(27039771)	+	HUERS-P3-int	LTR/ERV1	843	2673	(6246)	3017686
7692	18.1	0.9	0.9	chr4	163192313	163194415	(27020140)	C	HUERS-P3-int	LTR/ERV1	(5635)	3284	891	3017697
25428	6.5	0.5	0.0	chr4	163719034	163725152	(26489403)	C	L1PA5	LINE/L1	(3)	6151	2	3018443
31	21.4	6.1	0.0	chr4	165508727	165508824	(24705731)	+	(TATGTC)n	Simple_repeat	1	104	(0)	3021203
27348	3.2	0.2	0.3	chr4	167343517	167349561	(22864994)	C	L1PA3	LINE/L1	(0)	6155	125	3023456
16	34.5	1.6	1.5	chr4	168794402	168794465	(21420090)	+	(AC)n	Simple_repeat	1	65	(0)	3025339
52	8.1	0.0	0.0	chr4	168794473	168794539	(21420016)	+	(CA)n	Simple_repeat	1	67	(0)	3025340
9547	19.9	3.9	3.8	chr4	168934193	168935001	(21279554)	+	L1M2c	LINE/L1	4404	5222	(2343)	3025537
21763	8.5	1.3	1.5	chr4	168934985	168941034	(21273521)	+	L1PA7	LINE/L1	11	6062	(407)	3025539
12250	9.9	1.5	4.2	chr4	169546049	169549421	(20665134)	C	L1PA7	LINE/L1	(3060)	3401	1	3026464
2355	10.4	0.0	0.0	chr4	169549426	169549722	(20664833)	C	AluSq2	SINE/Alu	(16)	297	1	3026468
9664	4.6	1.2	10.9	chr4	169678415	169679948	(20534607)	C	SVA_B	Retroposon/SVA	(0)	1383	1	3026680
1126	21.3	0.6	16.0	chr4	169785432	169786173	(20428382)	+	SATR2	Satellite	1	627	(0)	3026838
2430	15.2	11.0	3.2	chr4	169786174	169786255	(20428300)	+	SATR1	Satellite	6618	6823	(2841)	3026837
1814	32.2	2.4	0.2	chr4	171574025	171574565	(18639990)	+	MER70-int	LTR/ERVL	2974	3526	(1497)	3029163
15	8.8	0.0	0.0	chr4	171814179	171814202	(18400353)	+	(AAC)n	Simple_repeat	1	24	(0)	3029457
2206	15.3	0.0	0.0	chr4	172065101	172065439	(18149116)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3029770
2847	14.2	1.0	2.6	chr4	172065563	172065667	(18148888)	C	L1MC1	LINE/L1	(5)	6328	6234	3029771
12	7.5	6.7	3.1	chr4	173169705	173169734	(17044821)	+	(CCCG)n	Simple_repeat	1	32	(0)	3031240
13	21.7	0.0	2.6	chr4	173169735	173169742	(17044813)	+	(CCCCAGC)n	Simple_repeat	2	39	(0)	3031241
12	16.3	2.8	2.7	chr4	173169848	173169883	(17044672)	+	(TGCCGGC)n	Simple_repeat	1	37	(0)	3031242
6491	5.4	0.5	10.8	chr4	173183492	173184653	(17029902)	C	SVA_B	Retroposon/SVA	(340)	1043	2	3031262
18	24.4	0.0	0.0	chr4	173371225	173371272	(16843283)	+	(GCC)n	Simple_repeat	1	48	(0)	3031515
12	17.6	2.4	4.7	chr4	173528998	173529039	(16685516)	+	(CCGGCGC)n	Simple_repeat	1	43	(0)	3031755
31	5.2	0.0	2.4	chr4	173529188	173529229	(16685326)	+	(GCG)n	Simple_repeat	1	42	(0)	3031756
400	26.4	7.2	1.2	chr4	173537846	173538014	(16676541)	+	MIRb	SINE/MIR	62	241	(27)	3031763
5704	3.3	0.7	0.4	chr4	174586239	174586937	(15627618)	C	SVA_C	Retroposon/SVA	(3)	1381	681	3033176
23373	7.6	0.6	0.7	chr4	177017218	177023392	(13191163)	+	L1PA6	LINE/L1	179	6327	(0)	3036324
336	31.8	7.8	4.1	chr4	177407557	177407843	(12806712)	C	L2c	LINE/L2	(12)	3414	3080	3036880
1811	14.6	7.5	1.3	chr4	177407902	177407932	(12806623)	+	MER39B	LTR/ERV1	1	32	(621)	3036881
5196	9.7	3.5	0.8	chr4	177407933	177408691	(12805864)	C	LTR17	LTR/ERV1	(0)	780	1	3036882
8791	16.7	5.1	2.6	chr4	178094862	178096776	(12117779)	+	L1MC1	LINE/L1	2894	4859	(1460)	3037779
6426	11.3	1.3	1.1	chr4	179791363	179792306	(10422249)	+	THE1B-int	LTR/ERVL-MaLR	635	1580	(0)	3039940
3685	16.2	7.4	5.1	chr4	181726561	181727508	(8487047)	C	MER21B	LTR/ERVL	(6)	932	9	3042483
2236	18.2	3.3	0.9	chr4	182877306	182877754	(7336801)	C	L1MB2	LINE/L1	(24)	6147	5688	3044030
14	26.9	2.0	0.0	chr4	184825845	184825893	(5388662)	+	(GCCGCG)n	Simple_repeat	1	50	(0)	3047221
30	17.8	4.5	3.2	chr4	184826080	184826168	(5388387)	+	(CGCCC)n	Simple_repeat	1	93	(0)	3047222
1527	24.9	3.6	1.3	chr4	185075035	185075490	(5139065)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	3047626
466	18.4	4.1	5.8	chr4	185472485	185472657	(4741898)	C	Zaphod2	DNA/hAT-Tip100	(171)	3353	3184	3048340
2027	16.6	0.0	0.3	chr4	185917232	185917527	(4297028)	C	AluJb	SINE/Alu	(17)	295	1	3048921
4304	15.2	6.6	2.1	chr4	185917528	185917904	(4296651)	+	MER21B	LTR/ERVL	467	862	(6)	3048920
246	13.2	0.0	0.0	chr4	186554582	186554619	(3659936)	C	LTR60	LTR/ERV1	(548)	38	1	3049834
2007	14.9	11.9	0.5	chr4	189259692	189260070	(954485)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3053638
10194	15.2	0.9	0.7	chr4	189260071	189261699	(952856)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3053638
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
4747	18.1	7.3	9.6	chr4	190119764	190122447	(92108)	+	TAR1	Satellite/telo	1	2622	(566)	3054643
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
1095	10.4	0.7	0.9	chr4	190180974	190182175	(32380)	+	BSR/Beta	Satellite	1	1199	(0)	3054653
7973	10.4	3.5	1.2	chr5	11943	13334	(181524925)	C	TAR1	Satellite/telo	(43)	2068	644	3054967
294	18.5	0.0	0.0	chr5	13334	13385	(181524874)	C	MLT2B3	LTR/ERVL	(341)	213	162	3054968
1032	17.1	5.1	1.1	chr5	13386	13574	(181524685)	C	THE1C	LTR/ERVL-MaLR	(0)	375	179	3054969
13	12.7	2.6	5.1	chr5	321663	321700	(181216559)	+	G-rich	Low_complexity	1	39	(0)	3055309
199	32.1	9.7	6.7	chr5	322637	322756	(181215503)	C	MIRc	SINE/MIR	(117)	151	28	3055311
421	27.6	3.5	1.2	chr5	566782	566946	(180971313)	+	L1MEg	LINE/L1	1249	1417	(4667)	3055521
1736	23.5	5.2	2.8	chr5	645404	645932	(180892327)	+	MER6A	DNA/TcMar-Tigger	1	542	(63)	3055598
582	25.7	25.6	0.2	chr5	646203	646647	(180891612)	C	HAL1M8	LINE/L1	(1962)	1029	433	3055599
12	15.4	5.3	2.5	chr5	666206	666243	(180872016)	+	(ACAGCCC)n	Simple_repeat	1	40	(0)	3055613
419	36.2	4.6	3.2	chr5	967790	968066	(180570193)	+	L1ME1	LINE/L1	490	770	(6333)	3055838
228	31.7	4.6	0.0	chr5	968097	968241	(180570018)	+	L1ME1	LINE/L1	828	979	(6124)	3055838
237	33.8	4.3	5.7	chr5	1256648	1256788	(180281471)	C	MIRb	SINE/MIR	(76)	192	54	3056086
2050	9.3	7.9	0.0	chr5	1313882	1314160	(180224099)	+	AluSx1	SINE/Alu	1	303	(9)	3056134
380	29.1	16.6	1.5	chr5	1314270	1314660	(180223599)	+	MLT1D	LTR/ERVL-MaLR	17	471	(34)	3056135
272	17.5	1.7	0.0	chr5	1316513	1316569	(180221690)	+	MER88	LTR/ERVL	4	61	(403)	3056136
236	20.0	1.4	2.8	chr5	1316592	1316663	(180221596)	+	MER88	LTR/ERVL	148	218	(246)	3056136
180	23.8	0.0	0.0	chr5	1464318	1464359	(180073900)	C	L2	LINE/L2	(3317)	102	61	3056274
1122	12.2	0.0	0.0	chr5	1759316	1759462	(179778797)	C	AluSz6	SINE/Alu	(12)	300	154	3056622
13	11.7	3.6	0.0	chr5	1759805	1759832	(179778427)	+	(AGAGC)n	Simple_repeat	1	29	(0)	3056623
37	20.9	4.4	1.7	chr5	1787915	1788052	(179750207)	+	(CTGTCT)n	Simple_repeat	1	141	(0)	3056650
354	31.6	16.8	6.1	chr5	1788133	1788363	(179749896)	+	MIR	SINE/MIR	2	255	(7)	3056651
2168	11.5	0.0	0.3	chr5	3114088	3114382	(178423877)	+	AluSq2	SINE/Alu	5	298	(15)	3058011
2129	13.5	7.5	0.8	chr5	3114531	3114903	(178423356)	C	MER57B1	LTR/ERV1	(0)	401	2	3058012
967	31.6	6.2	4.8	chr5	3218701	3219555	(178318704)	+	ERV3-16A3_I-int	LTR/ERVL	3948	4815	(411)	3058133
481	29.7	6.7	2.5	chr5	3509174	3509373	(178028886)	C	MIR	SINE/MIR	(3)	259	51	3058415
689	31.7	6.3	4.6	chr5	10092801	10093253	(171445006)	+	L1M6	LINE/L1	3255	3715	(2685)	3066304
4495	11.4	4.6	0.0	chr5	10093296	10093942	(171444317)	+	L1PA7	LINE/L1	10	687	(5774)	3066310
794	29.9	10.9	11.2	chr5	14775574	14776497	(166761762)	C	L2b	LINE/L2	(212)	3163	2225	3072645
25095	6.2	1.3	0.0	chr5	16394999	16401086	(165137173)	C	L1PA6	LINE/L1	(0)	6154	1	3074945
16	31.6	1.2	2.3	chr5	16774387	16774411	(164763848)	+	(ATATT)n	Simple_repeat	1	23	(0)	3075495
2506	7.1	0.0	0.7	chr5	16774412	16774720	(164763539)	C	AluY	SINE/Alu	(4)	307	1	3075496
623	24.2	28.5	2.3	chr5	17105527	17105951	(164432308)	C	L2a	LINE/L2	(91)	3335	2778	3076227
11640	11.6	2.1	0.9	chr5	19077843	19080995	(162457264)	C	L1P1	LINE/L1	(3182)	3279	129	3078900
1989	14.8	6.9	3.1	chr5	21592739	21593088	(159945171)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3082214
2178	14.3	10.3	1.3	chr5	21593089	21593347	(159944912)	+	MSTA	LTR/ERVL-MaLR	151	428	(0)	3082213
1139	16.2	2.4	1.9	chr5	26176414	26176621	(155361638)	+	THE1B	LTR/ERVL-MaLR	1	209	(166)	3088247
5861	20.7	6.4	2.4	chr5	28012686	28013516	(153524743)	+	HUERS-P3b-int	LTR/ERV1	749	1599	(5819)	3090623
44	0.0	0.0	0.0	chr5	28013517	28013556	(153524703)	+	(ATTT)n	Simple_repeat	1	40	(0)	3090624
5984	9.6	3.3	0.4	chr5	29603044	29604647	(151933612)	+	L1PA5	LINE/L1	5683	6466	(3)	3092588
290	33.2	14.1	0.7	chr5	32266028	32266333	(149271926)	+	L2c	LINE/L2	3034	3387	(0)	3096515
1436	20.6	8.3	9.5	chr5	32638027	32638297	(148899962)	C	L1MC4	LINE/L1	(1266)	6776	6485	3097247
248	28.0	8.8	1.1	chr5	32645082	32645175	(148893084)	C	MARNA	DNA/TcMar-Mariner	(141)	445	344	3097267
314	17.7	4.4	5.7	chr5	32645509	32645633	(148892626)	+	MLT1N2	LTR/ERVL-MaLR	399	542	(20)	3097270
22447	7.7	0.3	0.3	chr5	34428761	34434920	(147103339)	C	L1PA6	LINE/L1	(11)	6143	1	3099783
11478	12.9	2.6	0.7	chr5	34468811	34471913	(147066346)	+	L1P3	LINE/L1	10	3136	(3325)	3099826
1337	21.5	4.3	0.7	chr5	35617351	35617638	(145920621)	C	AluSx3	SINE/Alu	(11)	300	2	3101644
8833	17.7	3.4	2.0	chr5	36012264	36012391	(145525868)	+	MSTA-int	LTR/ERVL-MaLR	1	141	(1490)	3102179
2268	14.2	4.2	5.4	chr5	36012392	36012777	(145525482)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3102180
881	30.4	9.2	2.0	chr5	36391740	36392132	(145146127)	C	MLT1K	LTR/ERVL-MaLR	(9)	586	163	3102718
1201	28.4	10.3	1.5	chr5	36392160	36392621	(145145638)	C	LTR33	LTR/ERVL	(6)	509	3	3102719
18	27.2	4.9	1.2	chr5	36876605	36876685	(144661574)	+	(CGG)n	Simple_repeat	1	85	(0)	3103485
14	13.2	2.9	2.8	chr5	36876818	36876852	(144661407)	+	(CTCC)n	Simple_repeat	1	36	(0)	3103486
15	12.6	0.0	0.0	chr5	36876989	36877015	(144661244)	+	(GGA)n	Simple_repeat	1	27	(0)	3103487
19	4.0	0.0	0.0	chr5	36877200	36877225	(144661034)	+	(CGG)n	Simple_repeat	1	26	(0)	3103488
2524	5.3	1.2	0.3	chr5	39272983	39273320	(142264939)	+	SVA_D	Retroposon/SVA	707	1047	(339)	3107348
6684	7.9	3.1	1.7	chr5	40722207	40723453	(140814806)	+	SVA_B	Retroposon/SVA	95	1383	(0)	3109311
557	25.5	2.4	5.3	chr5	40877413	40877485	(140660774)	+	MER5A1	DNA/hAT-Charlie	2	74	(92)	3109608
3416	8.5	1.2	7.5	chr5	40877486	40878031	(140660228)	C	LTR10F	LTR/ERV1	(0)	511	1	3109609
11992	10.2	4.5	5.6	chr5	43365301	43367829	(138170430)	C	L1P3	LINE/L1	(3960)	2539	2	3112969
8188	5.7	1.7	16.3	chr5	43510427	43512039	(138026220)	+	SVA_A	Retroposon/SVA	15	1387	(0)	3113199
20	21.8	1.9	0.0	chr5	43556761	43556813	(137981446)	+	(CCGGCC)n	Simple_repeat	1	54	(0)	3113263
18	4.1	0.0	0.0	chr5	43556848	43556872	(137981387)	+	(CTC)n	Simple_repeat	1	25	(0)	3113264
26426	3.4	0.2	1.8	chr5	45493600	45499615	(136038644)	C	L1PA3	LINE/L1	(0)	6155	124	3115647
7296	15.0	2.7	0.9	chr5	53396878	53397466	(128140793)	C	L1MA3	LINE/L1	(6173)	1392	798	3120190
1912	14.9	5.2	1.6	chr5	53397467	53397833	(128140426)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3120192
7296	15.0	2.7	0.9	chr5	53397834	53398469	(128139790)	C	L1MA3	LINE/L1	(6768)	797	144	3120190
14	25.3	0.0	0.0	chr5	53482747	53482788	(128055471)	+	(CTCCCC)n	Simple_repeat	1	42	(0)	3120339
14	8.7	10.8	0.0	chr5	53482812	53482848	(128055411)	+	(CTCACTG)n	Simple_repeat	1	41	(0)	3120340
24227	8.0	1.1	0.5	chr5	53851998	53854832	(127683427)	C	L1PA6	LINE/L1	(3313)	2833	5	3120806
1160	24.7	8.3	5.7	chr5	54526624	54527488	(127010771)	C	L2a	LINE/L2	(5)	3421	2544	3121866
18	22.0	2.9	4.2	chr5	55173295	55173363	(126364896)	+	(CCCCG)n	Simple_repeat	1	71	(0)	3122809
743	23.3	0.0	0.0	chr5	55186421	55186549	(126351710)	C	FRAM	SINE/Alu	(47)	129	1	3122833
181	34.5	0.0	0.0	chr5	55186565	55186622	(126351637)	+	MIR	SINE/MIR	204	261	(1)	3122834
1350	17.9	2.0	1.0	chr5	55186664	55186963	(126351296)	C	MER33	DNA/hAT-Charlie	(5)	319	17	3122835
296	16.9	1.5	0.0	chr5	55223115	55223179	(126315080)	+	L1PB4	LINE/L1	6091	6156	(0)	3122904
24281	6.5	0.9	0.3	chr5	56776315	56782435	(124755824)	C	L1PA5	LINE/L1	(5)	6149	4	3125543
13	8.7	0.0	14.0	chr5	56909853	56909902	(124628357)	+	G-rich	Low_complexity	1	50	(0)	3125753
7471	8.6	1.6	0.5	chr5	58161771	58162782	(123375477)	C	L1P3	LINE/L1	(5438)	1023	1	3127736
1765	14.8	0.7	0.7	chr5	58936563	58936840	(122601419)	C	AluJo	SINE/Alu	(24)	288	11	3128828
288	20.6	4.5	0.0	chr5	58936894	58936956	(122601303)	+	MER58D	DNA/hAT-Charlie	313	378	(8)	3128829
197	31.1	0.0	0.0	chr5	58936964	58937024	(122601235)	+	UCON132b	DNA/hAT-Tip100	67	127	(21)	3128830
3507	19.3	9.1	8.3	chr5	58937066	58937991	(122600268)	C	L1M2	LINE/L1	(5907)	942	9	3128831
1572	13.8	1.0	12.3	chr5	61255906	61256246	(120282013)	C	AluJr	SINE/Alu	(9)	303	2	3131982
622	31.5	8.0	4.2	chr5	61256247	61256342	(120281917)	C	Plat_L3	LINE/CR1	(388)	3198	3104	3131981
549	27.1	12.3	6.8	chr5	61256455	61256822	(120281437)	C	MLT1L	LTR/ERVL-MaLR	(219)	391	1	3131983
24106	6.6	1.3	0.1	chr5	62752439	62758520	(118779739)	+	L1PA5	LINE/L1	4	6150	(4)	3134327
26125	2.9	0.1	0.0	chr5	62798975	62804997	(118733262)	C	L1PA2	LINE/L1	(4)	6151	124	3134392
15	10.1	2.9	2.9	chr5	65103091	65103124	(116435135)	+	(CCCGC)n	Simple_repeat	1	35	(0)	3137372
14	24.5	0.0	5.2	chr5	65925454	65925511	(115612748)	+	G-rich	Low_complexity	1	58	(0)	3138686
18	20.4	5.6	2.7	chr5	65925578	65925648	(115612611)	+	(CTGCCCC)n	Simple_repeat	1	75	(0)	3138687
20	20.9	5.3	2.5	chr5	65925814	65925888	(115612371)	+	(CCCT)n	Simple_repeat	1	79	(0)	3138688
23	11.5	0.0	0.0	chr5	65926105	65926142	(115612117)	+	(GGAC)n	Simple_repeat	1	38	(0)	3138689
17027	3.1	0.1	0.1	chr5	66750284	66754219	(114784040)	+	L1HS	LINE/L1	124	4057	(2089)	3139890
305	33.1	4.9	3.5	chr5	67278243	67278383	(114259876)	C	MIRb	SINE/MIR	(31)	237	95	3140604
1405	20.1	16.2	0.7	chr5	68932814	68933114	(112605145)	C	LTR18A	LTR/ERVL	(0)	357	1	3142932
367	19.6	0.0	0.0	chr5	68933137	68933192	(112605067)	C	Tigger3c	DNA/TcMar-Tigger	(543)	59	4	3142929
1890	16.6	1.0	4.2	chr5	72128638	72128950	(109409309)	C	AluJr	SINE/Alu	(8)	304	2	3148534
13	24.0	2.2	2.1	chr5	72848148	72848193	(108690066)	+	(CGG)n	Simple_repeat	1	47	(0)	3149599
20	9.8	2.0	6.0	chr5	73498823	73498871	(108039388)	+	(GGCCA)n	Simple_repeat	1	50	(0)	3150587
5147	9.6	0.8	0.1	chr5	74221959	74222657	(107315602)	C	L1P1	LINE/L1	(5155)	1000	297	3151659
742	8.3	0.0	0.0	chr5	74222643	74222738	(107315521)	C	L1P1	LINE/L1	(6057)	98	3	3151659
6255	7.5	0.1	0.1	chr5	75103210	75104024	(106434235)	+	L1PA10	LINE/L1	5353	6167	(1)	3153075
8573	9.5	1.8	10.5	chr5	75129960	75131334	(106406925)	C	LTR12D	LTR/ERV1	(0)	1254	1	3153107
24668	6.7	0.7	0.2	chr5	75131335	75137172	(106401087)	+	L1PA5	LINE/L1	295	6151	(3)	3153106
11433	10.3	1.2	0.3	chr5	75292148	75293708	(106244551)	C	L1P3	LINE/L1	(4881)	1580	5	3153308
4189	11.0	6.5	3.2	chr5	75293709	75294577	(106243682)	+	MER4-int	LTR/ERV1	1472	2256	(4342)	3153304
18002	10.8	2.5	2.7	chr5	75564272	75566794	(105971465)	C	L1PA7	LINE/L1	(3829)	2632	39	3153739
23848	12.6	1.7	4.6	chr5	76263299	76265932	(105272327)	C	L1PA8	LINE/L1	(3825)	2636	6	3154721
27180	3.3	0.1	0.1	chr5	77474803	77480837	(104057422)	+	L1PA3	LINE/L1	124	6155	(0)	3156711
17	15.8	2.2	4.3	chr5	77492451	77492496	(104045763)	+	(GCG)n	Simple_repeat	1	47	(0)	3156732
29	31.5	0.0	7.3	chr5	77630068	77630145	(103908114)	+	(GGCGG)n	Simple_repeat	1	191	(0)	3156915
27	19.2	4.4	5.9	chr5	77630146	77630258	(103908001)	+	G-rich	Low_complexity	1	118	(0)	3156916
15	9.1	0.0	0.0	chr5	77630660	77630683	(103907576)	+	(GGC)n	Simple_repeat	1	24	(0)	3156917
24262	7.5	1.1	0.1	chr5	78435234	78441339	(103096920)	C	L1PA6	LINE/L1	(0)	6327	174	3158127
27032	4.8	0.2	0.1	chr5	78939283	78945425	(102592834)	C	L1PA4	LINE/L1	(0)	6155	2	3158815
20	18.8	3.6	1.7	chr5	78984876	78984931	(102553328)	+	(GCG)n	Simple_repeat	1	58	(0)	3158884
13	10.0	0.0	0.0	chr5	78985153	78985174	(102553085)	+	(CAG)n	Simple_repeat	1	22	(0)	3158885
11	12.8	8.7	4.0	chr5	79991100	79991145	(101547114)	+	(CCTGCGC)n	Simple_repeat	1	50	(0)	3160666
12	16.8	0.0	0.0	chr5	80035286	80035312	(101502947)	+	(CCCGG)n	Simple_repeat	1	27	(0)	3160747
5617	3.4	2.8	1.4	chr5	80823715	80824456	(100713803)	C	SVA_C	Retroposon/SVA	(19)	1365	613	3162267
314	31.4	5.5	0.0	chr5	80824452	80824553	(100713706)	C	MER5B	DNA/hAT-Charlie	(69)	109	2	3162268
1888	22.4	2.4	4.2	chr5	81021704	81022221	(100516038)	C	LTR26C	LTR/ERV1	(0)	539	41	3162591
24141	8.5	1.0	0.9	chr5	81373067	81379495	(100158764)	+	L1PA7	LINE/L1	5	6469	(0)	3163059
22768	10.0	1.4	2.3	chr5	82132251	82138678	(99399581)	C	L1PA7	LINE/L1	(1)	6468	8	3164178
26385	2.6	1.9	0.1	chr5	82866881	82872788	(98665471)	C	L1PA3	LINE/L1	(2)	6153	124	3165233
19972	9.9	1.2	0.4	chr5	83127983	83133776	(98404483)	C	L1PA5	LINE/L1	(0)	6154	249	3165540
7467	10.4	5.2	10.7	chr5	83133777	83135108	(98403151)	+	LTR12D	LTR/ERV1	1	1254	(0)	3165541
592	29.6	7.6	0.0	chr5	83400932	83401137	(98137122)	C	MIR	SINE/MIR	(3)	259	37	3165911
19	16.2	1.5	7.6	chr5	83474233	83474297	(98063962)	+	G-rich	Low_complexity	1	66	(0)	3166016
20	3.4	0.0	3.1	chr5	83474842	83474873	(98063386)	+	(TATTT)n	Simple_repeat	1	32	(0)	3166017
1276	5.0	0.0	0.0	chr5	85257494	85257653	(96280606)	C	L1PA5	LINE/L1	(5)	6149	5990	3168307
1259	22.3	2.4	3.0	chr5	85257664	85257964	(96280295)	+	MLT1B	LTR/ERVL-MaLR	1	299	(91)	3168308
25322	6.2	1.0	0.3	chr5	86265810	86271139	(95267120)	C	L1P1	LINE/L1	(763)	5383	11	3169558
3667	25.3	5.5	8.4	chr5	86491144	86494144	(95044115)	C	L1MEf	LINE/L1	(1012)	5532	2787	3169857
17	28.8	1.6	1.6	chr5	87267811	87267873	(94270386)	+	(CTCC)n	Simple_repeat	1	64	(0)	3170894
22291	10.5	1.9	0.9	chr5	87472336	87478717	(94059542)	+	L1PA8	LINE/L1	8	6487	(0)	3171170
4194	16.9	7.5	4.9	chr5	87499099	87500000	(94038259)	+	LTR28B	LTR/ERV1	4	879	(95)	3171193
739	20.0	0.8	0.0	chr5	87500002	87500131	(94038128)	+	LTR28B	LTR/ERV1	844	974	(0)	3171194
278	29.9	3.3	10.3	chr5	87500181	87500374	(94037885)	C	MLT1K	LTR/ERVL-MaLR	(386)	209	30	3171195
16	0.0	0.0	0.0	chr5	87500440	87500457	(94037802)	+	(T)n	Simple_repeat	1	18	(0)	3171196
11697	11.6	0.8	0.5	chr5	87566287	87567978	(93970281)	C	L1P3	LINE/L1	(4758)	1703	8	3171271
17986	5.3	0.1	0.0	chr5	88310430	88314147	(93224112)	C	L1P1	LINE/L1	(2420)	3726	3	3172148
23911	7.5	0.2	0.1	chr5	88617453	88623600	(92914659)	C	L1PA6	LINE/L1	(4)	6323	182	3172598
54	0.0	0.0	0.0	chr5	88685550	88685595	(92852664)	+	(GT)n	Simple_repeat	1	46	(0)	3172667
831	35.3	14.1	3.6	chr5	89132602	89134136	(92404123)	+	L2b	LINE/L2	698	2420	(999)	3173191
12995	11.7	1.5	0.4	chr5	89158880	89161324	(92376935)	+	L1PA7	LINE/L1	5	2457	(4042)	3173214
22374	9.2	2.4	2.4	chr5	90794685	90801080	(90737179)	+	L1PA7	LINE/L1	5	6467	(2)	3175236
14465	5.6	0.3	0.4	chr5	93856116	93857936	(87680323)	C	L1PA3	LINE/L1	(4334)	1821	3	3179147
16	19.2	2.0	3.9	chr5	95731312	95731372	(85806887)	+	(GCAGCG)n	Simple_repeat	1	59	(0)	3181581
17	31.4	1.4	1.4	chr5	95961739	95961810	(85576449)	+	(GCC)n	Simple_repeat	1	73	(0)	3181912
27747	2.2	0.0	0.1	chr5	97513924	97519943	(84018316)	C	L1PA2	LINE/L1	(13)	6142	125	3184047
26	22.2	4.0	0.0	chr5	97520059	97520132	(84018127)	+	(TATC)n	Simple_repeat	1	77	(0)	3184049
248	35.6	4.3	2.2	chr5	98022438	98022572	(83515687)	C	MIR3	SINE/MIR	(66)	142	5	3184652
17297	6.1	0.6	0.7	chr5	98022599	98025962	(83512297)	+	L1PA4	LINE/L1	3	3363	(2783)	3184653
24750	7.0	0.9	1.2	chr5	99146177	99152358	(82385901)	+	L1PA5	LINE/L1	4	6150	(4)	3186112
1999	17.2	9.2	3.2	chr5	99192897	99202104	(82336155)	C	SATR1	Satellite	(0)	17012	6511	3186161
2018	17.1	9.7	2.3	chr5	99233367	99235307	(82302952)	+	SATR1	Satellite	1	2084	(0)	3186170
5130	15.8	2.8	0.5	chr5	99235308	99236736	(82301523)	+	L1PA15	LINE/L1	4713	6162	(3)	3186171
23788	7.3	0.6	2.2	chr5	100699906	100705798	(80832461)	+	L1PA6	LINE/L1	367	6148	(6)	3188095
12448	19.4	2.7	0.9	chr5	101939505	101943544	(79594715)	C	L1PA16	LINE/L1	(2358)	4125	10	3189512
612	22.8	13.3	2.7	chr5	102433888	102434108	(79104151)	C	L1MEg	LINE/L1	(3772)	2374	2127	3190125
1743	25.7	2.9	7.3	chr5	102434122	102434625	(79103634)	+	LTR40a	LTR/ERVL	34	514	(5)	3190126
28	14.7	3.2	1.6	chr5	103258663	103258724	(78279535)	+	GA-rich	Low_complexity	1	64	(0)	3191197
15	33.0	0.0	1.8	chr5	103259272	103259326	(78278933)	+	(GC)n	Simple_repeat	1	55	(0)	3191198
13	27.9	0.0	0.0	chr5	103259393	103259435	(78278824)	+	(GCTC)n	Simple_repeat	1	43	(0)	3191199
11544	16.1	1.5	2.3	chr5	104178499	104180970	(77357289)	+	HUERS-P3-int	LTR/ERV1	22	2457	(6462)	3192393
9972	5.7	3.6	0.9	chr5	105858884	105860229	(75678030)	+	SVA_C	Retroposon/SVA	1	1384	(0)	3194356
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
1868	23.8	6.8	3.4	chr5	109938888	109939422	(71598837)	C	MLT1F2	LTR/ERVL-MaLR	(5)	555	1	3199665
188	31.5	10.8	1.8	chr5	109939463	109939572	(71598687)	C	L3	LINE/CR1	(112)	3987	3867	3199666
3536	17.3	4.3	0.0	chr5	110823189	110823812	(70714447)	+	LTR28C	LTR/ERV1	1	652	(477)	3200686
307	19.5	9.9	2.4	chr5	110823782	110823865	(70714394)	+	LTR28C	LTR/ERV1	1039	1129	(0)	3200686
511	24.2	14.7	4.9	chr5	110823866	110824091	(70714168)	+	MER52-int	LTR/ERV1	1	252	(6839)	3200686
2953	19.8	5.3	2.1	chr5	110984977	110985735	(70552524)	+	L1M1	LINE/L1	5388	6172	(1387)	3200848
25737	4.1	0.5	0.1	chr5	110985741	110991743	(70546516)	+	L1PA5	LINE/L1	128	6152	(2)	3200850
22272	9.0	1.0	2.3	chr5	111711196	111717241	(69821018)	C	L1PA7	LINE/L1	(1)	6468	416	3201793
30	0.0	0.0	0.0	chr5	111717242	111717269	(69820990)	+	(AAAC)n	Simple_repeat	1	28	(0)	3201794
11792	9.3	1.7	0.0	chr5	111717270	111717668	(69820591)	C	L1PA7	LINE/L1	(6046)	415	6	3201793
27644	17.7	1.1	1.8	chr5	111922067	111927118	(69611141)	C	HUERS-P3-int	LTR/ERV1	(2773)	6146	1131	3202082
27	32.9	1.7	1.6	chr5	113309922	113309961	(68228298)	+	(TTTC)n	Simple_repeat	3	43	(0)	3204093
2154	17.2	5.9	1.3	chr5	113310109	113310497	(68227762)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3204094
4794	17.6	3.3	2.1	chr5	113606273	113607733	(67930526)	+	HUERS-P3b-int	LTR/ERV1	243	1993	(6926)	3204530
41451	14.3	1.3	0.7	chr5	115078281	115084865	(66453394)	C	HUERS-P3-int	LTR/ERV1	(2094)	6825	126	3206269
24659	7.2	1.1	0.1	chr5	115117314	115123392	(66414867)	+	L1PA5	LINE/L1	4	6138	(16)	3206336
12	35.2	0.0	0.0	chr5	115296445	115296501	(66241758)	+	(CGCCCC)n	Simple_repeat	1	57	(0)	3206587
58	22.1	1.5	8.4	chr5	115296655	115296913	(66241346)	+	G-rich	Low_complexity	1	263	(0)	3206588
3106	26.8	4.6	4.8	chr5	115925050	115926292	(65611967)	+	ERV3-16A3_I-int	LTR/ERVL	3527	4922	(745)	3207486
27345	3.5	0.0	0.1	chr5	117338254	117344286	(64193973)	C	L1PA3	LINE/L1	(0)	6155	127	3209485
242	34.6	9.4	5.2	chr5	120748415	120748822	(60789437)	C	L2c	LINE/L2	(0)	3387	2961	3213887
22665	8.4	0.6	0.3	chr5	121659902	121666048	(59872211)	+	L1PA6	LINE/L1	174	6314	(13)	3214979
24827	5.9	0.5	0.0	chr5	122630892	122636933	(58901326)	C	L1PA4	LINE/L1	(90)	6065	1	3216152
2568	7.1	0.0	0.0	chr5	122917799	122918106	(58620153)	+	AluY	SINE/Alu	1	308	(3)	3216669
546	15.4	0.0	0.0	chr5	122918127	122918204	(58620055)	+	AluSx	SINE/Alu	1	78	(234)	3216670
185	30.9	3.5	0.0	chr5	122918592	122918646	(58619613)	+	L2a	LINE/L2	3352	3408	(18)	3216671
509	25.4	6.9	0.0	chr5	122944596	122944717	(58593542)	C	MLT1J	LTR/ERVL-MaLR	(114)	398	268	3216718
1750	20.5	12.0	3.3	chr5	123053519	123053937	(58484322)	C	MLT2B1	LTR/ERVL	(45)	475	9	3216871
11141	12.3	2.0	1.8	chr5	123257064	123259414	(58278845)	C	L1P2	LINE/L1	(3953)	2416	14	3217125
11384	15.4	3.4	1.9	chr5	123314523	123320769	(58217490)	C	L1PA8	LINE/L1	(11)	6476	6	3217222
13	25.3	5.4	0.0	chr5	123423087	123423142	(58115117)	+	(CCCCGGT)n	Simple_repeat	1	59	(0)	3217346
13	18.4	5.4	0.0	chr5	123423318	123423354	(58114905)	+	(GCC)n	Simple_repeat	1	39	(0)	3217347
26	17.8	3.1	1.5	chr5	123512385	123512449	(58025810)	+	(CTCG)n	Simple_repeat	1	67	(0)	3217484
13	19.8	1.9	7.3	chr5	123512601	123512654	(58025605)	+	(GCCCG)n	Simple_repeat	1	55	(0)	3217485
19	27.5	2.4	2.4	chr5	123512653	123512734	(58025525)	+	G-rich	Low_complexity	1	84	(0)	3217486
1879	12.5	6.5	5.3	chr5	124962835	124963171	(56575088)	+	MER61A	LTR/ERV1	1	341	(0)	3219446
2004	20.9	16.8	4.9	chr5	124963172	124963803	(56574456)	+	MER61-int	LTR/ERV1	1	707	(4510)	3219446
28260	2.6	0.1	0.4	chr5	126890287	126896333	(54641926)	C	L1PA3	LINE/L1	(0)	6155	126	3222146
8658	8.8	2.1	0.5	chr5	127270659	127271522	(54266737)	C	L1PA11	LINE/L1	(108)	6066	5188	3222619
2528	10.1	2.7	0.3	chr5	127271523	127271888	(54266371)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3222621
13	26.1	0.0	4.1	chr5	128083381	128083429	(53454830)	+	GA-rich	Low_complexity	1	49	(0)	3223722
20	20.7	1.7	3.3	chr5	128083672	128083730	(53454529)	+	(GCC)n	Simple_repeat	1	60	(0)	3223723
12	22.9	2.3	2.3	chr5	128083748	128083790	(53454469)	+	(GCCC)n	Simple_repeat	1	44	(0)	3223724
33	2.9	0.0	0.0	chr5	128084240	128084274	(53453985)	+	(GCG)n	Simple_repeat	1	35	(0)	3223725
22841	11.6	1.2	3.0	chr5	128649999	128656430	(52881829)	C	L1PA7	LINE/L1	(0)	6469	8	3224400
1500	18.3	3.4	4.3	chr5	128947868	128948167	(52590092)	C	AluJb	SINE/Alu	(12)	300	4	3224759
4631	26.6	3.1	5.4	chr5	128948168	128948458	(52589801)	+	L1ME1	LINE/L1	3862	4104	(2042)	3224758
2777	1.4	0.0	0.0	chr5	128948459	128948772	(52589487)	C	AluYb8	SINE/Alu	(0)	318	1	3224760
5267	18.0	7.7	1.6	chr5	130730999	130732093	(50806166)	+	L1M4b	LINE/L1	589	1755	(5112)	3226910
27952	2.1	0.0	0.0	chr5	130732095	130738109	(50800150)	+	L1PA2	LINE/L1	125	6139	(16)	3226911
26789	3.7	0.1	0.0	chr5	130817738	130823763	(50714496)	+	L1PA3	LINE/L1	127	6155	(0)	3227014
24211	8.7	1.8	3.0	chr5	132397847	132403147	(49135112)	+	L1PA6	LINE/L1	24	5352	(1109)	3229306
2760	7.5	4.0	0.6	chr5	133459926	133460289	(48077970)	+	MER51B	LTR/ERV1	1	377	(0)	3230988
239	37.0	2.1	4.2	chr5	135467038	135467181	(46071078)	C	MIRb	SINE/MIR	(19)	249	109	3234333
1451	21.3	9.9	4.9	chr5	135788397	135789759	(45748500)	+	SATR1	Satellite	1	1431	(38)	3234770
372	28.9	2.6	0.0	chr5	135829768	135829881	(45708378)	+	MIR	SINE/MIR	18	134	(128)	3234812
22	0.0	0.0	0.0	chr5	137499472	137499495	(44038764)	+	(T)n	Simple_repeat	1	24	(0)	3237044
4377	1.6	0.0	0.0	chr5	137499508	137500000	(44038259)	C	L1PA2	LINE/L1	(1)	6154	5662	3237045
20	17.5	5.4	1.7	chr5	137754199	137754254	(43784005)	+	GA-rich	Low_complexity	1	59	(0)	3237463
15	18.1	0.0	0.0	chr5	137754305	137754336	(43783923)	+	(GCC)n	Simple_repeat	1	32	(0)	3237464
17	21.3	4.1	0.0	chr5	138543114	138543162	(42995097)	+	(GGC)n	Simple_repeat	1	51	(0)	3239069
3143	18.2	7.5	9.1	chr5	138693739	138694477	(42843782)	C	MER21A	LTR/ERVL	(18)	913	188	3239377
1736	12.3	1.5	0.4	chr5	138694271	138694532	(42843727)	C	MER39	LTR/ERV1	(184)	523	259	3239378
9510	12.0	1.5	13.1	chr5	139549171	139550957	(41987302)	+	LTR12C	LTR/ERV1	3	1579	(0)	3241018
21	18.5	0.0	0.0	chr5	139561527	139561569	(41976690)	+	(GGC)n	Simple_repeat	1	43	(0)	3241047
21	8.1	5.1	0.0	chr5	139561727	139561765	(41976494)	+	(CCCCGT)n	Simple_repeat	1	41	(0)	3241048
18	25.5	1.6	1.6	chr5	139561766	139561788	(41976471)	+	(CCCCGC)n	Simple_repeat	1	63	(0)	3241049
489	26.0	4.5	0.8	chr5	139645477	139645604	(41892655)	+	MIRb	SINE/MIR	127	259	(9)	3241237
14	9.6	0.0	0.0	chr5	139648803	139648825	(41889434)	+	(GCG)n	Simple_repeat	1	23	(0)	3241244
13	33.9	1.5	0.0	chr5	139648864	139648892	(41889367)	+	(CCCTCC)n	Simple_repeat	1	66	(0)	3241245
13	12.1	8.3	0.0	chr5	139648893	139648928	(41889331)	+	(CCCCT)n	Simple_repeat	1	39	(0)	3241246
13	9.7	0.0	0.0	chr5	139748474	139748495	(41789764)	+	(ACC)n	Simple_repeat	1	22	(0)	3241437
3655	18.7	6.3	1.9	chr5	139779276	139780140	(41758119)	C	L1ME2z	LINE/L1	(3)	6441	5536	3241506
407	33.5	7.6	10.7	chr5	139780188	139780431	(41757828)	C	L3	LINE/CR1	(525)	3574	3334	3241501
2307	12.0	0.0	0.0	chr5	139780432	139780740	(41757519)	C	AluSz	SINE/Alu	(0)	312	4	3241507
18	0.0	0.0	3.9	chr5	140107832	140107857	(41430402)	+	(GCG)n	Simple_repeat	1	26	(0)	3242039
13	26.8	1.6	4.7	chr5	140107984	140108009	(41430250)	+	(CCT)n	Simple_repeat	1	45	(19)	3242040
13	7.6	7.1	0.0	chr5	140108010	140108037	(41430222)	+	(CCCG)n	Simple_repeat	1	30	(0)	3242041
13	26.8	1.6	4.7	chr5	140108038	140108046	(41430213)	+	(CCT)n	Simple_repeat	46	64	(0)	3242040
768	14.5	11.2	3.0	chr5	142225991	142226154	(39312105)	+	Zaphod3	DNA/hAT-Tip100	1	179	(2444)	3245493
573	29.8	25.2	2.8	chr5	142226213	142226537	(39311722)	C	MLT1O	LTR/ERVL-MaLR	(18)	524	127	3245494
1202	7.1	0.6	5.6	chr5	143254446	143254624	(38283635)	C	LTR9	LTR/ERV1	(0)	612	443	3247389
45	0.0	3.0	5.9	chr5	143254633	143254698	(38283561)	+	(TTTTC)n	Simple_repeat	1	68	(0)	3247391
993	7.3	0.8	0.0	chr5	143254704	143254826	(38283433)	C	AluSc	SINE/Alu	(48)	261	138	3247392
1135	21.6	2.3	3.0	chr5	143254830	143255092	(38283167)	C	MLT2C1	LTR/ERVL	(136)	261	1	3247393
382	27.3	4.7	5.3	chr5	145847878	145847988	(35690271)	+	MLT1K	LTR/ERVL-MaLR	427	541	(54)	3251405
1319	24.8	11.0	1.9	chr5	145847989	145848358	(35689901)	+	MLT1I	LTR/ERVL-MaLR	2	409	(2)	3251406
382	27.3	4.7	5.3	chr5	145848359	145848416	(35689843)	+	MLT1K	LTR/ERVL-MaLR	542	595	(0)	3251405
15	11.9	2.5	4.9	chr5	146338996	146339035	(35199224)	+	(GCGAGC)n	Simple_repeat	1	41	(0)	3252377
2118	13.6	0.0	1.6	chr5	146451320	146451627	(35086632)	C	AluSx	SINE/Alu	(9)	303	1	3252619
313	36.0	3.2	6.9	chr5	147853216	147853475	(33684784)	C	MIRc	SINE/MIR	(14)	254	5	3254957
231	31.9	0.0	6.9	chr5	147853740	147853840	(33684419)	+	L2b	LINE/L2	3013	3106	(269)	3254958
10717	17.9	2.8	1.6	chr5	148779608	148782104	(32756155)	+	L1PA12	LINE/L1	561	2850	(5305)	3256417
499	25.8	12.2	3.5	chr5	149061472	149061672	(32476587)	C	MIR	SINE/MIR	(14)	248	28	3256957
24	27.4	3.6	2.6	chr5	150486521	150486630	(31051629)	+	(GCGG)n	Simple_repeat	1	114	(0)	3260074
14	12.7	0.0	0.0	chr5	150656530	150656555	(30881704)	+	(CCG)n	Simple_repeat	1	26	(0)	3260455
37	2.6	0.0	0.0	chr5	150656738	150656776	(30881483)	+	(CGCCCC)n	Simple_repeat	1	39	(0)	3260456
248	9.1	15.4	0.0	chr5	151029124	151029167	(30509092)	+	MADE1	DNA/TcMar-Mariner	5	56	(24)	3261009
950	17.1	4.5	0.0	chr5	151029329	151029498	(30508761)	+	FAM	SINE/Alu	8	185	(0)	3261010
27339	2.8	1.8	0.2	chr5	152653966	152659898	(28878361)	C	L1PA2	LINE/L1	(7)	6148	124	3264095
474	30.3	4.6	5.6	chr5	155649426	155649621	(25888638)	C	MIRb	SINE/MIR	(54)	214	21	3269576
2870	18.0	5.4	3.1	chr5	157618485	157619103	(23919156)	C	LTR27	LTR/ERV1	(0)	636	3	3273049
4398	12.6	0.6	3.1	chr5	157720700	157720945	(23817314)	C	HUERS-P3b-int	LTR/ERV1	(388)	7030	6781	3273257
24575	6.7	0.6	0.7	chr5	157720951	157727128	(23811131)	+	L1PA6	LINE/L1	174	6323	(4)	3273259
337	26.9	20.9	5.4	chr5	158995551	158995754	(22542505)	+	MIRb	SINE/MIR	9	252	(16)	3275416
614	23.0	5.6	1.9	chr5	168381482	168381631	(13156628)	C	MER5B	DNA/hAT-Charlie	(4)	174	19	3289913
319	23.9	9.9	5.5	chr5	171936141	171936210	(9602049)	+	L1MC4	LINE/L1	1825	1895	(4320)	3296302
1867	16.1	0.7	1.6	chr5	171936211	171936515	(9601744)	+	AluJr	SINE/Alu	1	302	(10)	3296314
349	16.4	13.4	2.6	chr5	171936516	171936628	(9601631)	+	L1MC4	LINE/L1	2019	2145	(4070)	3296302
1818	16.9	12.4	0.8	chr5	171965801	171966176	(9572083)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	3296372
2072	11.2	3.9	0.0	chr5	172220354	172220649	(9317610)	+	AluSp	SINE/Alu	1	308	(5)	3296956
11085	12.8	5.3	2.7	chr5	172220650	172221216	(9317043)	+	L1MC1	LINE/L1	4193	4784	(1537)	3296948
793	21.2	10.6	7.8	chr5	172243293	172243554	(9294705)	+	MLT1A0	LTR/ERVL-MaLR	2	323	(67)	3297001
2363	6.6	0.0	0.7	chr5	172243555	172243826	(9294433)	C	AluSq2	SINE/Alu	(7)	306	37	3297002
458	24.5	10.9	1.3	chr5	172486192	172486340	(9051919)	+	MIR	SINE/MIR	34	198	(64)	3297545
2159	10.0	0.0	2.5	chr5	172494177	172494496	(9043763)	+	AluSx1	SINE/Alu	1	312	(0)	3297563
273	36.6	8.2	0.7	chr5	172494610	172494890	(9043369)	C	L2b	LINE/L2	(18)	3357	3054	3297564
280	29.1	3.4	0.2	chr5	172625371	172625508	(8912751)	+	L2a	LINE/L2	3042	3182	(193)	3297855
474	20.3	7.9	0.0	chr5	172625712	172625839	(8912420)	C	MIRb	SINE/MIR	(107)	161	23	3297856
1346	15.4	1.8	2.8	chr5	173205552	173205726	(8332533)	C	L1MB3	LINE/L1	(849)	5297	5119	3299164
630	27.1	1.7	5.7	chr5	173753118	173753376	(7784883)	C	MIRb	SINE/MIR	(1)	267	12	3300214
1979	13.5	0.6	5.2	chr5	173773034	173773359	(7764900)	+	AluJo	SINE/Alu	1	311	(1)	3300259
314	32.7	10.3	10.9	chr5	173773371	173773596	(7764663)	C	L2b	LINE/L2	(0)	3375	3171	3300260
2606	6.4	0.0	0.6	chr5	173773597	173773908	(7764351)	+	AluYm1	SINE/Alu	1	310	(1)	3300261
11346	16.3	3.3	8.3	chr5	174263862	174265939	(7272320)	+	L1M3	LINE/L1	3283	5267	(873)	3301177
24114	8.2	0.8	0.5	chr5	174465905	174472053	(7066206)	+	L1PA6	LINE/L1	5	6149	(5)	3301555
2399	9.9	0.0	0.6	chr5	175024451	175024763	(6513496)	C	AluY	SINE/Alu	(0)	311	1	3302666
21	20.7	0.7	8.0	chr5	175478417	175478508	(6059751)	+	G-rich	Low_complexity	1	85	(0)	3303490
310	31.0	8.1	1.2	chr5	175738216	175738375	(5799884)	C	L2c	LINE/L2	(102)	3285	3114	3304027
251	28.1	3.7	8.0	chr5	175738416	175738527	(5799732)	+	MIRc	SINE/MIR	45	151	(117)	3304028
292	25.9	2.4	0.0	chr5	175738646	175738726	(5799533)	C	MIR1_Amn	SINE/MIR	(94)	174	91	3304029
266	31.9	10.5	2.8	chr5	175738754	175738933	(5799326)	C	MIRb	SINE/MIR	(38)	230	42	3304030
1123	27.8	11.0	2.8	chr5	175912934	175913274	(5624985)	C	L2a	LINE/L2	(0)	3426	3042	3304391
494	31.7	5.5	3.8	chr5	176187272	176187775	(5350484)	C	MLT1G3	LTR/ERVL-MaLR	(32)	563	10	3304796
13	25.5	5.5	2.6	chr5	176543293	176543365	(4994894)	+	(GCGGC)n	Simple_repeat	1	77	(0)	3305496
214	36.7	0.0	0.0	chr5	176543771	176543849	(4994410)	+	MIRb	SINE/MIR	117	195	(73)	3305497
341	22.9	7.6	3.9	chr5	176837948	176838074	(4700185)	C	L2a	LINE/L2	(0)	3426	3295	3306091
204	38.6	2.9	1.8	chr5	176838272	176838440	(4699819)	+	L2c	LINE/L2	2826	2996	(423)	3306092
704	27.1	11.9	8.2	chr5	177006938	177007059	(4531200)	+	L1ME3Cz	LINE/L1	270	394	(603)	3306400
309	27.8	7.3	0.0	chr5	177497934	177498058	(4040201)	+	MIRb	SINE/MIR	114	259	(9)	3307531
1757	27.4	15.9	2.6	chr5	177498343	177499011	(4039248)	+	L2	LINE/L2	1650	2424	(995)	3307532
195	22.5	19.2	0.0	chr5	177599872	177599951	(3938308)	+	MIR3	SINE/MIR	30	128	(80)	3307714
1162	26.9	11.0	2.8	chr5	177925952	177926292	(3611967)	+	L2a	LINE/L2	3042	3426	(0)	3308244
305	22.2	1.6	0.0	chr5	178058951	178059013	(3479246)	C	Charlie8	DNA/hAT-Charlie	(5)	2423	2360	3308446
2285	11.6	0.3	0.0	chr5	178059084	178059385	(3478874)	C	AluSg	SINE/Alu	(7)	303	1	3308447
237	28.3	8.1	0.9	chr5	178204069	178204186	(3334073)	+	MIRc	SINE/MIR	28	150	(118)	3308793
13	31.2	0.0	0.0	chr5	178204924	178204974	(3333285)	+	(GGCCGG)n	Simple_repeat	1	51	(0)	3308794
13	26.1	2.2	0.0	chr5	178205115	178205160	(3333099)	+	G-rich	Low_complexity	1	47	(0)	3308795
12	22.0	4.8	0.0	chr5	178205185	178205226	(3333033)	+	(CGCTGG)n	Simple_repeat	1	44	(0)	3308796
19	13.0	4.8	0.0	chr5	178205276	178205317	(3332942)	+	(GCCAGG)n	Simple_repeat	1	44	(0)	3308797
1896	25.6	7.8	5.2	chr5	178501590	178501951	(3036308)	+	L1MDa	LINE/L1	300	687	(5953)	3309290
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
229	30.0	3.6	0.0	chr5	179167141	179167220	(2371039)	C	MIRc	SINE/MIR	(112)	156	74	3310440
192	27.3	15.4	4.3	chr5	179167693	179167784	(2370475)	+	MIR1_Amn	SINE/MIR	52	155	(75)	3310441
513	28.2	0.7	0.7	chr5	179224419	179224561	(2313698)	C	Charlie8	DNA/hAT-Charlie	(1916)	512	370	3310516
2543	3.6	0.0	0.7	chr5	179632025	179632333	(1905926)	+	AluYa5	SINE/Alu	1	307	(4)	3311229
308	2.1	0.0	2.0	chr5	179632755	179632803	(1905456)	C	AluY	SINE/Alu	(0)	301	254	3311230
1132	10.2	3.2	3.2	chr5	179632804	179632851	(1905408)	C	AluSx1	SINE/Alu	(126)	186	137	3311231
47	0.0	0.0	2.1	chr5	180209105	180209151	(1329108)	+	(CGC)n	Simple_repeat	1	47	(0)	3312243
1917	20.5	14.0	8.1	chr5	180209815	180210435	(1327824)	C	LTR12B	LTR/ERV1	(0)	667	4	3312244
14	19.7	2.3	3.4	chr5	180861159	180861208	(677051)	+	G-rich	Low_complexity	1	49	(0)	3313359
294	28.9	5.2	0.8	chr6	388482	388610	(170417369)	+	MIRc	SINE/MIR	83	217	(51)	3314755
302	27.7	14.4	3.7	chr6	388642	388802	(170417177)	C	MIRb	SINE/MIR	(1)	267	87	3314756
12	22.5	2.3	2.3	chr6	1387487	1387529	(169418450)	+	(ATTT)n	Simple_repeat	1	44	(0)	3316033
2190	11.5	0.7	0.0	chr6	1488729	1489023	(169316956)	+	AluSx	SINE/Alu	1	297	(15)	3316192
1961	14.9	11.9	2.1	chr6	1489024	1489242	(169316737)	+	MSTA	LTR/ERVL-MaLR	194	428	(0)	3316191
15	14.7	0.0	0.0	chr6	1489309	1489338	(169316641)	+	(GGGA)n	Simple_repeat	1	30	(0)	3316193
11	26.4	5.6	0.0	chr6	1624316	1624369	(169181610)	+	(GCCTCCC)n	Simple_repeat	1	57	(0)	3316395
2209	13.7	13.1	1.3	chr6	2210796	2211172	(168594807)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3317108
443	14.9	17.1	3.6	chr6	2524324	2524434	(168281545)	C	LTR41C	LTR/ERVL	(543)	158	30	3317555
475	24.4	15.6	0.6	chr6	2524471	2524639	(168281340)	C	L2	LINE/L2	(505)	2914	2716	3317556
12	10.3	6.1	2.9	chr6	2903423	2903455	(167902524)	+	(GGTCAG)n	Simple_repeat	1	35	(0)	3318087
327	32.6	2.7	0.7	chr6	3005819	3005963	(167800016)	C	MIRb	SINE/MIR	(120)	148	1	3318248
2237	8.8	3.6	0.3	chr6	3053985	3054278	(167751701)	+	AluSx1	SINE/Alu	1	304	(8)	3318324
298	27.1	8.8	2.6	chr6	3054387	3054688	(167751291)	+	L1MD1	LINE/L1	5815	6156	(86)	3318325
15	27.1	4.5	0.0	chr6	3068925	3068990	(167736989)	+	G-rich	Low_complexity	1	69	(0)	3318348
21	23.4	2.7	2.6	chr6	3157313	3157386	(167648593)	+	(CCAGCC)n	Simple_repeat	1	76	(0)	3318483
2204	15.5	6.5	2.0	chr6	3195584	3195991	(167609988)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3318545
16	12.1	3.9	7.4	chr6	3196232	3196284	(167609695)	+	G-rich	Low_complexity	1	51	(0)	3318546
271	28.3	0.0	0.0	chr6	3196375	3196434	(167609545)	+	L1MC4	LINE/L1	7791	7850	(192)	3318547
219	35.2	0.0	0.0	chr6	4399262	4399332	(166406647)	+	MIRb	SINE/MIR	118	188	(80)	3320380
12883	17.9	5.2	4.3	chr6	4422212	4424867	(166381112)	+	L1MCa	LINE/L1	1869	4577	(1987)	3320404
2474	10.9	0.0	0.6	chr6	4424868	4425180	(166380799)	+	AluSc8	SINE/Alu	1	311	(0)	3320407
2080	11.1	0.4	0.0	chr6	4484319	4484597	(166321382)	+	AluSx	SINE/Alu	16	295	(17)	3320516
5630	16.0	6.1	1.9	chr6	4958724	4959905	(165846074)	+	L1MB7	LINE/L1	2567	3800	(2346)	3321261
19	0.0	0.0	0.0	chr6	5896749	5896769	(164909210)	+	(T)n	Simple_repeat	1	21	(0)	3322718
28274	2.7	0.1	0.0	chr6	6294744	6300768	(164505211)	C	L1PA3	LINE/L1	(0)	6155	124	3323219
4375	20.8	9.9	0.8	chr6	6684371	6685349	(164120630)	+	Tigger6a	DNA/TcMar-Tigger	1	1078	(5)	3323755
12	14.1	7.3	2.3	chr6	7051687	7051727	(163754252)	+	(GGTGCGG)n	Simple_repeat	1	44	(0)	3324482
15	18.8	7.0	1.6	chr6	7541463	7541519	(163264460)	+	(GGCGCAG)n	Simple_repeat	1	61	(0)	3325356
12	9.3	5.0	7.1	chr6	7541708	7541747	(163264232)	+	(CTCCCG)n	Simple_repeat	1	42	(0)	3325357
2323	10.6	0.0	0.0	chr6	7590696	7590996	(163214983)	+	AluJb	SINE/Alu	1	301	(11)	3325413
8573	10.6	3.4	0.1	chr6	8618980	8620258	(162185721)	C	L1PA7	LINE/L1	(5126)	1344	1	3326970
23799	6.8	1.2	0.5	chr6	9213496	9216349	(161589630)	+	L1PA6	LINE/L1	9	2865	(3281)	3327795
4841	4.5	0.6	0.0	chr6	10133965	10134589	(160671390)	+	L1P1	LINE/L1	8	636	(5519)	3328994
18	24.2	7.3	0.0	chr6	11044334	11044417	(159761562)	+	(CG)n	Simple_repeat	1	90	(0)	3330624
342	33.0	6.4	0.0	chr6	12292928	12293030	(158512949)	C	MIR3	SINE/MIR	(57)	151	42	3332460
15289	17.6	1.1	2.8	chr6	12493662	12495530	(158310449)	+	L1PA13	LINE/L1	26	1863	(4922)	3332783
889	14.3	0.0	0.0	chr6	13113100	13113218	(157692761)	+	AluJr	SINE/Alu	182	300	(12)	3333716
608	30.8	5.0	0.0	chr6	13113220	13113466	(157692513)	+	L1M5	LINE/L1	3385	3644	(2502)	3333717
575	27.9	6.4	5.9	chr6	13113475	13113832	(157692147)	+	L1M5	LINE/L1	3854	4213	(1933)	3333717
229	29.5	11.3	1.3	chr6	13574911	13575212	(157230767)	C	L2a	LINE/L2	(689)	2730	2395	3334514
1062	19.4	7.7	2.2	chr6	13846824	13847248	(156958731)	C	MER74A	LTR/ERVL	(2)	556	50	3335033
5893	7.3	3.0	0.0	chr6	14068435	14069191	(156736788)	+	LTR17	LTR/ERV1	1	780	(0)	3335401
877	25.9	5.7	10.0	chr6	14069192	14069494	(156736485)	C	MLT1A1	LTR/ERVL-MaLR	(112)	296	7	3335400
1720	10.6	8.6	2.5	chr6	16207799	16208072	(154597907)	+	AluSz6	SINE/Alu	1	292	(20)	3339151
39	1.8	5.0	3.2	chr6	16761485	16761544	(154044435)	+	(CTC)n	Simple_repeat	1	63	(0)	3340017
26	17.1	3.4	0.0	chr6	16761548	16761606	(154044373)	+	(CGCT)n	Simple_repeat	1	61	(0)	3340018
1955	15.1	0.7	1.9	chr6	17124716	17125026	(153680953)	+	AluJb	SINE/Alu	1	307	(5)	3340586
706	22.7	0.0	0.0	chr6	17125036	17125167	(153680812)	+	FLAM_C	SINE/Alu	2	133	(10)	3340587
12	14.1	7.3	2.3	chr6	17600548	17600588	(153205391)	+	G-rich	Low_complexity	1	44	(0)	3341453
29	8.3	1.9	1.9	chr6	18263848	18263900	(152542079)	+	(TCC)n	Simple_repeat	1	54	(0)	3342727
18	28.7	1.1	5.3	chr6	18264204	18264298	(152541681)	+	(CGCC)n	Simple_repeat	1	90	(0)	3342728
17809	13.4	3.2	1.7	chr6	19238626	19244619	(151561360)	+	L1PA8	LINE/L1	868	7021	(11)	3344156
12	4.7	0.0	7.7	chr6	19522546	19522571	(151283408)	+	(AAAT)n	Simple_repeat	1	26	(0)	3344528
1282	21.0	12.0	3.0	chr6	19522915	19523253	(151282726)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3344529
2493	8.0	0.0	0.0	chr6	20039669	20039979	(150766000)	+	AluY	SINE/Alu	1	311	(0)	3345305
400	27.7	2.5	0.0	chr6	21914579	21914697	(148891282)	+	LTR88c	LTR/Gypsy?	38	159	(703)	3348528
232	37.4	8.8	0.0	chr6	22369010	22369196	(148436783)	+	L2c	LINE/L2	2391	2595	(824)	3349184
12	28.7	1.9	1.9	chr6	24359983	24360035	(146445944)	+	G-rich	Low_complexity	1	54	(0)	3351761
300	21.7	11.5	2.0	chr6	24360312	24360415	(146445564)	C	L2b	LINE/L2	(0)	3426	3285	3351762
46726	4.7	2.2	0.2	chr6	24676688	24682292	(146123687)	C	HERV17-int	LTR/ERV1	(2903)	5723	1	3352343
1555	17.4	0.0	2.3	chr6	26100848	26100975	(144705004)	+	AluJb	SINE/Alu	134	260	(52)	3354634
1966	7.8	0.4	1.6	chr6	26313951	26314206	(144491773)	+	AluSz	SINE/Alu	16	268	(44)	3355000
14	12.6	0.0	0.0	chr6	26314209	26314235	(144491744)	+	(GGGAG)n	Simple_repeat	1	27	(0)	3355001
231	16.7	0.0	0.0	chr6	26314266	26314301	(144491678)	C	MLT1F1	LTR/ERVL-MaLR	(223)	346	311	3355002
2242	5.7	6.6	0.3	chr6	26314307	26314588	(144491391)	C	AluSx1	SINE/Alu	(11)	301	1	3355003
2476	6.2	1.9	0.3	chr6	27473370	27473700	(143332279)	+	AluSx4	SINE/Alu	1	310	(0)	3356942
289	33.6	7.9	0.6	chr6	28125012	28125196	(142680783)	C	MIRb	SINE/MIR	(0)	262	58	3358109
5473	16.2	1.5	0.8	chr6	28354792	28355649	(142450330)	C	HERVL18-int	LTR/ERVL	(2466)	3581	2718	3358499
1485	13.7	21.4	1.0	chr6	28355624	28355921	(142450058)	C	HERVL18-int	LTR/ERVL	(3570)	2477	2119	3358499
1171	17.5	17.7	1.4	chr6	28355921	28356282	(142449697)	C	HERVL18-int	LTR/ERVL	(4237)	1810	1390	3358499
7434	11.2	10.9	3.0	chr6	30221504	30222724	(140583255)	C	SVA_F	Retroposon/SVA	(17)	1358	30	3361289
9328	9.7	3.8	0.3	chr6	30286977	30288666	(140517313)	C	L1PREC2	LINE/L1	(434)	5726	3971	3361378
379	26.1	7.8	12.7	chr6	30781418	30781577	(140024402)	C	MIRb	SINE/MIR	(103)	165	3	3362214
364	30.6	10.2	2.7	chr6	30781620	30781846	(140024133)	C	MIRc	SINE/MIR	(15)	253	1	3362216
2661	17.6	5.3	2.5	chr6	31040319	31040613	(139765366)	+	MLT1D	LTR/ERVL-MaLR	195	505	(0)	3362685
1065	31.9	4.0	2.5	chr6	31040614	31041018	(139764961)	C	ERVL-E-int	LTR/ERVL	(4911)	756	340	3362682
7639	7.0	3.0	0.4	chr6	31373669	31374649	(139431330)	C	LTR13	LTR/ERVK	(0)	1007	1	3363237
446	17.7	4.0	3.0	chr6	31378201	31378299	(139427680)	+	MIR	SINE/MIR	40	139	(123)	3363244
6917	20.4	2.5	2.4	chr6	33122935	33123947	(137682032)	C	HUERS-P3-int	LTR/ERV1	(5651)	1767	750	3365864
592	12.6	16.8	0.0	chr6	33548873	33548991	(137256988)	+	Tigger3a	DNA/TcMar-Tigger	2	144	(204)	3366689
18	6.1	2.6	5.1	chr6	33621352	33621389	(137184590)	+	(CGGG)n	Simple_repeat	1	39	(0)	3366871
2531	6.8	0.0	0.3	chr6	33753797	33754106	(137051873)	C	AluY	SINE/Alu	(0)	311	3	3367078
226	31.1	4.6	1.0	chr6	33754132	33754235	(137051744)	C	MIR1_Amn	SINE/MIR	(83)	147	40	3367079
59	21.5	0.7	3.3	chr6	35213818	35213969	(135592010)	+	GA-rich	Low_complexity	1	153	(0)	3369926
1035	23.0	6.9	3.7	chr6	35810873	35811224	(134994755)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	48	3371217
444	32.1	9.1	0.6	chr6	35811300	35811459	(134994520)	C	MIR	SINE/MIR	(3)	259	85	3371218
1555	13.6	0.4	0.4	chr6	35929770	35930006	(134875973)	+	L1M4	LINE/L1	3952	4188	(1958)	3371468
2413	19.9	13.9	3.0	chr6	35930008	35930768	(134875211)	C	Charlie2a	DNA/hAT-Charlie	(151)	2710	1854	3371469
269	27.2	8.0	2.1	chr6	35961318	35961411	(134844568)	+	MIRb	SINE/MIR	113	212	(56)	3371528
201	26.5	12.1	1.9	chr6	35961663	35961766	(134844213)	+	L2	LINE/L2	1654	1769	(1650)	3371529
1992	13.9	0.0	4.8	chr6	38054099	38054414	(132751565)	+	AluJo	SINE/Alu	1	301	(11)	3375848
10040	12.0	3.4	1.1	chr6	38525438	38526993	(132278986)	+	THE1D-int	LTR/ERVL-MaLR	4	1599	(32)	3376526
1088	24.7	3.8	6.1	chr6	38710596	38710923	(132095056)	+	MER11D	LTR/ERVK	103	422	(475)	3376841
565	23.7	11.0	2.8	chr6	38711067	38711283	(132094696)	+	MER11D	LTR/ERVK	646	882	(15)	3376841
789	30.9	8.5	2.5	chr6	40260241	40260448	(130545531)	+	LTR33	LTR/ERVL	56	273	(242)	3379150
2124	14.5	3.3	3.3	chr6	40260449	40260812	(130545167)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3379151
789	30.9	8.5	2.5	chr6	40260813	40261035	(130544944)	+	LTR33	LTR/ERVL	274	515	(0)	3379150
1379	24.6	6.9	2.1	chr6	41227134	41227519	(129578460)	C	MLT1A1	LTR/ERVL-MaLR	(2)	406	1	3380811
2940	21.5	3.8	1.4	chr6	41227520	41227677	(129578302)	C	L1MC3	LINE/L1	(703)	7082	6918	3380809
482	26.1	31.4	2.2	chr6	42107889	42108161	(128697818)	+	LTR33	LTR/ERVL	156	508	(7)	3382542
214	27.4	8.9	3.4	chr6	42293243	42293359	(128512620)	C	MIRc	SINE/MIR	(87)	181	58	3382947
19	14.0	0.0	2.4	chr6	42453070	42453110	(128352869)	+	G-rich	Low_complexity	1	41	(0)	3383279
18	29.7	0.0	1.5	chr6	42782599	42782665	(128023314)	+	G-rich	Low_complexity	1	67	(0)	3384024
20	25.6	2.6	2.5	chr6	42782747	42782824	(128023155)	+	G-rich	Low_complexity	1	80	(0)	3384025
14	14.9	5.4	0.0	chr6	42783122	42783158	(128022821)	+	(CGCTCC)n	Simple_repeat	1	39	(0)	3384026
13	16.4	8.6	3.2	chr6	42783234	42783291	(128022688)	+	(CCGCGG)n	Simple_repeat	1	63	(0)	3384027
10823	5.3	1.2	1.4	chr6	43424621	43426006	(127379973)	+	SVA_C	Retroposon/SVA	1	1384	(0)	3385334
352	26.9	8.2	3.3	chr6	43496900	43497049	(127308930)	C	MIR3	SINE/MIR	(16)	192	35	3385469
813	21.3	2.7	1.1	chr6	43497071	43497255	(127308724)	C	MER20	DNA/hAT-Charlie	(1)	218	31	3385470
230	23.8	3.1	1.6	chr6	43952321	43952384	(126853595)	+	LTR104_Mam	LTR/Gypsy	1067	1131	(378)	3386311
16	14.2	0.0	0.0	chr6	43952385	43952415	(126853564)	+	(TCAT)n	Simple_repeat	1	31	(0)	3386312
17	11.7	2.6	2.5	chr6	44297771	44297810	(126508169)	+	(CGCTGC)n	Simple_repeat	1	40	(0)	3386924
25952	6.2	0.2	0.1	chr6	44584173	44590313	(126215666)	C	L1PA5	LINE/L1	(8)	6146	3	3387450
21798	9.0	2.4	2.2	chr6	44878625	44884626	(125921353)	+	L1P3	LINE/L1	2	6096	(373)	3387873
25421	5.6	0.4	0.2	chr6	45281108	45287253	(125518726)	+	L1PA4	LINE/L1	2	6154	(1)	3388404
14	21.9	1.5	7.3	chr6	46015901	46015967	(124790012)	+	(GCCGG)n	Simple_repeat	1	68	(0)	3389568
101	4.6	0.0	3.4	chr6	46016089	46016234	(124789745)	+	(AGGGGA)n	Simple_repeat	1	146	(0)	3389569
1292	26.0	5.9	2.4	chr6	46993647	46994072	(123811907)	+	L2	LINE/L2	2000	2441	(978)	3391052
2586	26.5	8.9	6.8	chr6	46994285	46994422	(123811557)	C	HAL1	LINE/L1	(110)	2397	2254	3391053
3939	22.7	7.1	2.2	chr6	47492811	47494791	(123311188)	C	L1MCa	LINE/L1	(4171)	2489	210	3391848
1141	25.4	8.3	4.7	chr6	47494792	47494875	(123311104)	+	MLT1C	LTR/ERVL-MaLR	6	88	(379)	3391849
1771	18.4	0.3	2.0	chr6	47494876	47495179	(123310800)	+	AluJb	SINE/Alu	1	299	(13)	3391850
27146	3.3	0.1	0.1	chr6	49791503	49797511	(121008468)	C	L1PA3	LINE/L1	(18)	6137	125	3394905
27914	3.0	0.2	0.1	chr6	51895657	51901683	(118904296)	+	L1PA3	LINE/L1	127	6155	(0)	3397703
818	26.1	9.6	6.2	chr6	52522001	52522533	(118283446)	C	Charlie8	DNA/hAT-Charlie	(1899)	529	3	3398649
12901	10.0	0.4	0.4	chr6	52855165	52857021	(117948958)	C	L1PA7	LINE/L1	(4635)	1864	1	3399165
2333	23.3	2.0	2.5	chr6	52857031	52857638	(117948341)	C	L1MB7	LINE/L1	(0)	6184	5580	3399166
17688	6.8	0.6	0.7	chr6	52860827	52862657	(117943322)	+	L1PA3	LINE/L1	1	1837	(4318)	3399172
13	16.2	0.0	5.3	chr6	53348582	53348619	(117457360)	+	(CGCCCG)n	Simple_repeat	1	38	(0)	3400036
12	9.7	8.6	2.6	chr6	53348638	53348672	(117457307)	+	(CGGAG)n	Simple_repeat	1	38	(0)	3400037
1367	23.5	12.3	2.1	chr6	53424878	53425308	(117380671)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	147	3400147
688	15.3	0.0	0.8	chr6	53425344	53425468	(117380511)	+	L1M3	LINE/L1	4786	4909	(1231)	3400148
615	12.2	0.0	0.0	chr6	53425478	53425559	(117380420)	C	AluSx	SINE/Alu	(230)	82	1	3400149
2168	7.6	0.4	0.4	chr6	53425716	53425979	(117380000)	+	AluSc	SINE/Alu	1	264	(45)	3400150
19	7.2	0.0	0.0	chr6	53544648	53544676	(117261303)	+	(CCT)n	Simple_repeat	1	29	(0)	3400325
12	23.5	2.5	0.0	chr6	53544953	53544992	(117260987)	+	(GCGGCG)n	Simple_repeat	1	41	(0)	3400326
22516	10.6	1.3	1.7	chr6	55158007	55162966	(115643013)	+	L1PA7	LINE/L1	1	4953	(1508)	3402580
246	24.4	4.2	16.9	chr6	58243911	58244235	(112561744)	C	SATR2	Satellite	(37)	282	1	3406731
2040	16.3	9.2	3.0	chr6	58244236	58246596	(112559383)	+	SATR1	Satellite	4612	7247	(0)	3406730
1961	19.1	10.1	2.8	chr6	62834782	62847003	(107958976)	+	SATR1	Satellite	1	14676	(911)	3409737
1942	20.8	9.4	2.9	chr6	62849815	62860616	(107945363)	+	SATR1	Satellite	1	11498	(2)	3409741
509	26.3	5.1	2.9	chr6	62860836	62861532	(107944447)	+	SATR1	Satellite	1	712	(84)	3409742
10444	6.9	6.9	3.4	chr6	63273974	63275493	(107530486)	C	LTR12C	LTR/ERV1	(0)	1579	3	3410235
17	8.8	0.0	0.0	chr6	63887315	63887338	(106918641)	+	(T)n	Simple_repeat	1	24	(0)	3411209
22406	9.9	1.4	0.8	chr6	63887363	63893726	(106912253)	+	L1PA7	LINE/L1	8	6461	(8)	3411210
384	34.8	8.8	3.8	chr6	64353488	64353723	(106452256)	+	MamTip2	DNA/hAT-Tip100	41	289	(16)	3411795
16923	8.2	1.4	0.1	chr6	66166506	66170098	(104635881)	+	L1PA6	LINE/L1	1	3622	(2524)	3413953
754	9.5	0.0	0.0	chr6	66479305	66479399	(104326580)	C	HERVL18-int	LTR/ERVL	(1559)	4488	4394	3414360
3828	16.9	0.0	3.2	chr6	66479398	66480047	(104325932)	C	HERVL18-int	LTR/ERVL	(2467)	3580	2952	3414360
21771	10.6	1.9	2.6	chr6	66488945	66495154	(104310825)	+	L1PA7	LINE/L1	8	6143	(11)	3414374
23146	8.8	0.9	0.6	chr6	66540928	66547077	(104258902)	+	L1PA6	LINE/L1	180	6322	(5)	3414439
16206	18.1	2.7	1.5	chr6	66923478	66926922	(103879057)	C	HUERS-P3-int	LTR/ERV1	(5348)	3571	1	3414890
25720	5.2	0.3	0.1	chr6	67095415	67101549	(103704430)	+	L1PA4	LINE/L1	3	6153	(2)	3415105
21760	10.9	1.0	2.5	chr6	67552359	67558796	(103247183)	C	L1PA7	LINE/L1	(7)	6462	5	3415649
3320	17.5	8.8	8.2	chr6	67673778	67674860	(103131119)	C	MER41-int	LTR/ERV1	(389)	4828	3991	3415776
15874	21.0	3.3	4.9	chr6	68569271	68573805	(102232174)	C	L1PA17	LINE/L1	(1930)	4919	484	3416833
2267	11.9	0.0	0.0	chr6	69475292	69475593	(101330386)	C	AluSg7	SINE/Alu	(7)	302	1	3417964
625	25.9	3.4	6.9	chr6	69475594	69475748	(101330231)	+	L2	LINE/L2	1966	2111	(1308)	3417961
922	24.6	7.8	0.0	chr6	69475773	69476044	(101329935)	+	L2	LINE/L2	2571	2865	(554)	3417961
2228	24.4	4.5	5.8	chr6	69494338	69495362	(101310617)	+	L1M3f	LINE/L1	2419	3429	(4136)	3417980
21289	3.2	0.2	0.0	chr6	69495363	69500000	(101305979)	+	L1HS	LINE/L1	124	4770	(1376)	3417981
24738	7.4	0.7	0.0	chr6	70974173	70980298	(99825681)	+	L1PA6	LINE/L1	176	6325	(2)	3419971
27342	3.2	0.2	0.0	chr6	71826716	71832734	(98973245)	C	L1PA3	LINE/L1	(0)	6155	125	3421108
2271	29.3	5.6	2.1	chr6	71832762	71835120	(98970859)	C	L1MEf	LINE/L1	(3495)	3446	826	3421104
25243	8.5	2.5	0.4	chr6	72157297	72164533	(98641446)	C	L1PA4	LINE/L1	(2)	6153	7	3421519
670	16.4	0.9	2.6	chr6	73448607	73448722	(97357257)	C	AluJr	SINE/Alu	(133)	179	66	3423462
2298	11.9	0.3	0.0	chr6	73448808	73449118	(97356861)	+	AluSz	SINE/Alu	1	312	(0)	3423463
10970	8.9	1.7	0.0	chr6	73971826	73973299	(96832680)	+	L1P3	LINE/L1	7	1506	(4955)	3424455
13	23.9	0.0	4.2	chr6	75206501	75206548	(95599431)	+	(ATCTCC)n	Simple_repeat	1	48	(0)	3425882
30	30.4	2.2	2.8	chr6	75601788	75601926	(95204053)	+	(GGC)n	Simple_repeat	1	142	(0)	3426464
29	0.0	0.0	0.0	chr6	75753456	75753480	(95052499)	+	(TA)n	Simple_repeat	1	25	(0)	3426759
1694	18.6	4.2	1.1	chr6	75753482	75753761	(95052218)	C	AluSx	SINE/Alu	(23)	289	1	3426760
1707	13.9	5.0	9.2	chr6	76025941	76026297	(94779682)	+	MER61A	LTR/ERV1	1	341	(0)	3427192
2449	15.8	5.7	3.9	chr6	76026299	76026837	(94779142)	+	MER61-int	LTR/ERV1	1	549	(4668)	3427192
27148	3.1	0.1	0.0	chr6	76105619	76111641	(94694338)	C	L1PA2	LINE/L1	(4)	6151	125	3427279
4392	13.4	1.8	9.1	chr6	76633364	76634222	(94171757)	C	LTR1A2	LTR/ERV1	(2)	835	41	3427898
10212	11.9	2.4	1.0	chr6	76848851	76850416	(93955563)	C	L1PA7	LINE/L1	(4866)	1595	7	3428150
2581	19.0	2.8	1.5	chr6	76958431	76958964	(93847015)	+	L1PA15	LINE/L1	2204	2744	(3945)	3428270
27249	3.2	0.1	0.2	chr6	76958966	76964983	(93840996)	+	L1PA3	LINE/L1	128	6139	(16)	3428271
3951	16.1	3.0	2.2	chr6	77705954	77706565	(93099414)	+	MER39	LTR/ERV1	6	635	(72)	3429137
23930	7.1	0.4	0.4	chr6	79347177	79352933	(91453046)	+	L1PA6	LINE/L1	415	6152	(2)	3431115
360	34.3	14.2	2.4	chr6	79933793	79934344	(90871635)	C	L2	LINE/L2	(700)	2719	2089	3431974
3860	17.1	6.2	4.8	chr6	80112017	80113644	(90692335)	C	LOR1-int	LTR/ERV1	(6735)	1081	1	3432223
22484	7.9	0.8	1.0	chr6	80409632	80412091	(90393888)	C	L1PA6	LINE/L1	(3703)	2443	5	3432591
244	28.2	1.3	2.5	chr6	82512219	82512298	(88293681)	+	MER5B	DNA/hAT-Charlie	1	79	(99)	3435266
21623	9.1	1.1	1.2	chr6	82512322	82518423	(88287556)	+	L1PA7	LINE/L1	346	6465	(4)	3435267
181	20.7	13.4	0.0	chr6	82784227	82784284	(88021695)	C	OldhAT1	DNA/hAT-Ac	(2181)	667	601	3435622
22836	8.5	1.0	0.3	chr6	83287158	83293277	(87512702)	C	L1PA7	LINE/L1	(3)	6151	5	3436331
22733	9.2	2.1	1.1	chr6	83942180	83948514	(86857465)	+	L1PA7	LINE/L1	8	6459	(10)	3437195
9851	7.0	5.8	0.0	chr6	85313777	85315063	(85490916)	C	L1PA6	LINE/L1	(4818)	1366	1	3438857
9839	18.7	0.7	1.0	chr6	85317284	85318937	(85487042)	+	MSTB-int	LTR/ERVL-MaLR	1	1650	(1)	3438863
12816	11.2	1.2	0.6	chr6	86812683	86816094	(83989885)	C	L1PA7	LINE/L1	(3060)	3401	2	3440663
5659	15.1	2.6	0.6	chr6	86816096	86817506	(83988473)	+	L1MA4	LINE/L1	4845	6289	(11)	3440662
22488	6.9	1.5	0.1	chr6	87139686	87145758	(83660221)	+	L1PA6	LINE/L1	174	6322	(5)	3441124
25228	4.3	0.1	0.2	chr6	90053982	90060141	(80745838)	+	L1PA4	LINE/L1	2	6155	(0)	3445842
192	37.6	2.3	0.0	chr6	92420581	92420665	(78385314)	C	MamRTE1	LINE/RTE-BovB	(124)	3688	3602	3448911
17080	7.8	0.6	0.1	chr6	92420760	92424537	(78381442)	+	L1PA5	LINE/L1	1	3779	(2367)	3448912
26666	3.9	0.1	0.0	chr6	94851130	94857158	(75948821)	+	L1PA3	LINE/L1	124	6155	(0)	3451823
10796	9.5	2.7	0.0	chr6	95453248	95454707	(75351272)	C	L1P3	LINE/L1	(4957)	1504	4	3452495
1364	9.5	0.0	3.9	chr6	95454711	95454918	(75351061)	C	L1PB1	LINE/L1	(176)	5975	5776	3452493
334	23.7	8.2	1.5	chr6	96898100	96898236	(73907743)	C	MER5B	DNA/hAT-Charlie	(28)	150	4	3454286
1557	14.5	13.0	0.0	chr6	99329898	99330159	(71475820)	C	AluJo	SINE/Alu	(11)	301	1	3457437
24995	6.8	0.3	0.2	chr6	99670804	99676939	(71129040)	C	L1PA5	LINE/L1	(3)	6324	185	3458011
493	28.0	0.7	0.0	chr6	99902638	99902780	(70903199)	C	LTR33A	LTR/ERVL	(0)	520	377	3458314
14	27.0	0.0	6.2	chr6	99902789	99902853	(70903126)	+	(CTG)n	Simple_repeat	1	65	(0)	3458315
25681	6.6	0.6	0.1	chr6	100908126	100914267	(69891712)	C	L1PA4	LINE/L1	(1)	6327	178	3459638
27313	3.0	0.1	0.0	chr6	102088198	102094226	(68711753)	+	L1PA3	LINE/L1	124	6155	(0)	3461146
2183	17.1	10.5	1.7	chr6	103478433	103480503	(67325476)	+	SATR1	Satellite	1	3410	(5057)	3462805
22520	8.8	1.0	0.5	chr6	104756575	104762708	(66043271)	+	L1PA7	LINE/L1	178	6324	(3)	3464401
13	23.8	2.2	2.1	chr6	104859847	104859892	(65946087)	+	(CCG)n	Simple_repeat	1	47	(0)	3464541
6724	6.4	4.0	2.3	chr6	104990586	104992027	(65813952)	C	SVA_C	Retroposon/SVA	(23)	1361	26	3464759
24960	7.0	0.4	0.0	chr6	105415012	105421154	(65384825)	+	L1PA5	LINE/L1	174	6327	(0)	3465388
22493	8.6	1.3	2.4	chr6	106404579	106411023	(64394956)	+	L1PA7	LINE/L1	1	6468	(1)	3466877
22086	6.4	0.5	0.3	chr6	107166664	107170611	(63635368)	C	L1PA5	LINE/L1	(2180)	3966	1	3468352
28470	2.5	0.0	0.1	chr6	107854716	107860748	(62945231)	C	L1PA3	LINE/L1	(0)	6155	131	3469492
207	21.7	0.0	2.1	chr6	107923095	107923141	(62882838)	+	MIR3	SINE/MIR	153	198	(10)	3469586
1528	15.4	11.7	0.8	chr6	107923154	107923413	(62882566)	C	AluJr	SINE/Alu	(20)	292	1	3469587
1498	17.8	4.6	2.5	chr6	107923544	107923818	(62882161)	C	AluJr	SINE/Alu	(30)	282	2	3469588
24	23.5	3.6	2.3	chr6	107958112	107958194	(62847785)	+	(GCC)n	Simple_repeat	1	86	(0)	3469654
2537	4.7	0.7	0.7	chr6	108271762	108272058	(62533921)	+	AluY	SINE/Alu	1	297	(14)	3470285
4441	9.5	3.4	4.3	chr6	108272059	108272245	(62533734)	+	L1PREC2	LINE/L1	5965	6159	(1)	3470283
1884	13.0	14.0	1.3	chr6	109740753	109741125	(61064854)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3472597
13	7.4	0.0	8.8	chr6	110040045	110040078	(60765901)	+	A-rich	Low_complexity	1	34	(0)	3473071
1407	22.3	5.0	8.9	chr6	110040149	110040480	(60765499)	C	MER84	LTR/ERV1	(2)	505	171	3473072
2431	7.2	0.0	0.0	chr6	110040481	110040773	(60765206)	C	AluSz	SINE/Alu	(14)	298	6	3473073
23318	7.7	1.3	0.8	chr6	110116062	110122197	(60683782)	+	L1PA6	LINE/L1	5	6154	(0)	3473182
1702	16.8	3.4	0.0	chr6	111047557	111047865	(59758114)	C	L1M4	LINE/L1	(2268)	3878	3559	3474920
18621	5.1	1.0	0.3	chr6	111505513	111507862	(59298117)	C	L1P2	LINE/L1	(3794)	2352	1	3475722
697	16.7	4.5	0.8	chr6	111970224	111970279	(58835700)	+	MER50	LTR/ERV1	1	61	(673)	3476459
41	4.8	0.0	0.0	chr6	111970280	111970323	(58835656)	+	(AC)n	Simple_repeat	1	44	(0)	3476460
697	16.7	4.5	0.8	chr6	111970324	111970393	(58835586)	+	MER50	LTR/ERV1	62	132	(602)	3476459
27876	2.2	0.0	0.0	chr6	113531118	113537147	(57268832)	+	L1PA2	LINE/L1	125	6153	(2)	3478630
27	0.0	0.0	0.0	chr6	113855011	113855036	(56950943)	+	(T)n	Simple_repeat	1	26	(0)	3479244
21	8.6	0.0	4.9	chr6	113855097	113855137	(56950842)	+	(CCCCG)n	Simple_repeat	1	41	(0)	3479245
17	25.1	0.0	7.4	chr6	113855186	113855266	(56950713)	+	(CCCCTC)n	Simple_repeat	1	81	(0)	3479246
8563	15.2	2.6	2.0	chr6	114009575	114011168	(56794811)	C	MER51-int	LTR/ERV1	(6213)	1603	1	3479498
46	6.0	0.0	0.0	chr6	114646629	114646681	(56159298)	+	(TC)n	Simple_repeat	1	53	(0)	3480415
497	26.4	13.8	4.1	chr6	114646997	114647288	(56158691)	C	L1MCc	LINE/L1	(6027)	909	585	3480413
26432	3.8	0.1	0.1	chr6	114720723	114726752	(56079227)	C	L1PA2	LINE/L1	(0)	6155	125	3480515
289	38.7	0.9	0.9	chr6	114726794	114726900	(56079079)	C	MIRb	SINE/MIR	(135)	133	27	3480516
24450	7.8	0.5	0.4	chr6	114923182	114929341	(55876638)	C	L1PA5	LINE/L1	(0)	6154	4	3480755
27126	2.6	0.5	0.0	chr6	115175228	115181228	(55624751)	+	L1PA2	LINE/L1	127	6153	(2)	3481016
5611	14.5	6.6	1.0	chr6	117371060	117372034	(53433945)	+	L1PB1	LINE/L1	3	1035	(5828)	3483796
20887	9.7	2.0	1.0	chr6	117645309	117651683	(53154296)	+	L1PA7	LINE/L1	2	6467	(2)	3484174
22149	10.3	1.2	3.0	chr6	118338047	118343006	(52462973)	C	L1PA7	LINE/L1	(1499)	4962	1	3485054
305	27.8	12.9	8.8	chr6	118651557	118651749	(52154230)	C	L1M4b	LINE/L1	(6265)	602	401	3485446
23	12.6	0.0	0.0	chr6	118893825	118893864	(51912115)	+	(A)n	Simple_repeat	1	40	(0)	3485823
24	17.9	5.4	2.6	chr6	118893924	118893997	(51911982)	+	(CCG)n	Simple_repeat	1	78	(0)	3485824
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
21841	9.8	1.6	1.3	chr6	119417673	119424079	(51381900)	+	L1PA7	LINE/L1	8	6465	(4)	3486566
25577	6.7	0.4	0.1	chr6	120432587	120438712	(50367267)	+	L1PA5	LINE/L1	2	6148	(6)	3487801
25471	5.2	0.2	0.8	chr6	122939357	122945550	(47860429)	C	L1PA4	LINE/L1	(0)	6155	1	3491087
26029	4.5	0.5	0.1	chr6	124407196	124413266	(46392713)	C	L1PA4	LINE/L1	(1)	6154	57	3492958
13	13.1	0.0	0.0	chr6	125790897	125790921	(45015058)	+	(CCT)n	Simple_repeat	1	25	(0)	3494827
15	10.1	2.9	2.9	chr6	127266776	127266809	(43539170)	+	G-rich	Low_complexity	1	35	(0)	3496650
15	8.8	0.0	0.0	chr6	127515788	127515811	(43290168)	+	(GCC)n	Simple_repeat	1	24	(0)	3496998
14	33.6	1.5	0.0	chr6	127516059	127516125	(43289854)	+	(CCCCCT)n	Simple_repeat	1	68	(0)	3496999
21	6.8	0.0	0.0	chr6	127516372	127516402	(43289577)	+	(CTG)n	Simple_repeat	1	31	(0)	3497000
12077	11.0	4.9	2.0	chr6	127779941	127782766	(43023213)	C	L1P2	LINE/L1	(3538)	2923	14	3497309
22099	6.1	0.1	0.2	chr6	128829463	128835615	(41970364)	+	L1PA5	LINE/L1	2	6145	(9)	3498695
21768	9.2	0.6	0.9	chr6	130701316	130707767	(40098212)	+	L1PA7	LINE/L1	6	6467	(2)	3501272
3675	11.9	2.5	5.4	chr6	130985014	130985625	(39820354)	+	LTR27B	LTR/ERV1	1	594	(0)	3501644
22971	6.9	3.3	0.1	chr6	131530019	131532246	(39273733)	C	L1P2	LINE/L1	(3824)	2322	29	3502476
2562	5.6	0.0	0.0	chr6	131532247	131532565	(39273414)	+	L1PA6	LINE/L1	5831	6149	(5)	3502478
21390	10.6	1.3	4.0	chr6	131538257	131541931	(39264048)	+	L1PA7	LINE/L1	5	3678	(2783)	3502489
23141	10.6	1.8	1.0	chr6	132349496	132355408	(38450571)	C	L1PB1	LINE/L1	(369)	6498	518	3503725
26214	3.0	0.1	0.1	chr6	133142074	133148104	(37657875)	C	L1PA3	LINE/L1	(1)	6154	127	3504855
899	14.8	0.0	0.0	chr6	133148105	133148246	(37657733)	+	THE1B	LTR/ERVL-MaLR	221	362	(2)	3504854
44	2.3	0.0	0.0	chr6	134462290	134462334	(36343645)	+	(TATT)n	Simple_repeat	1	45	(0)	3506957
1680	13.0	0.0	0.4	chr6	134462344	134462574	(36343405)	C	AluSz	SINE/Alu	(39)	273	44	3506958
2180	12.1	1.0	1.0	chr6	134480346	134480652	(36325327)	+	AluSz	SINE/Alu	2	308	(4)	3506996
25	22.9	4.9	4.7	chr6	137866994	137867115	(32938864)	+	G-rich	Low_complexity	1	128	(0)	3512115
24	16.1	7.0	1.3	chr6	138107346	138107416	(32698563)	+	(CGGAG)n	Simple_repeat	1	76	(0)	3512466
2981	14.1	10.6	5.2	chr6	139133089	139133686	(31672293)	+	MER51A	LTR/ERV1	1	634	(0)	3514179
1382	22.2	3.7	5.3	chr6	140760797	140761176	(30044803)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	3516451
3408	13.5	9.1	0.3	chr6	142108737	142109300	(28696679)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	963	3518060
705	20.2	0.8	0.0	chr6	142109301	142109424	(28696555)	+	MER52-int	LTR/ERV1	1282	1406	(5685)	3518061
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
641	19.6	20.4	8.4	chr6	143279023	143279261	(27526718)	C	ORSL	DNA/hAT-Tip100	(0)	275	1	3519652
285	31.3	9.7	0.7	chr6	143279307	143279451	(27526528)	C	MIRb	SINE/MIR	(48)	160	8	3519653
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
731	4.8	0.0	0.0	chr6	144216547	144216629	(26589350)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	3521045
1160	21.8	11.3	4.6	chr6	144962522	144962867	(25843112)	+	MLT1A	LTR/ERVL-MaLR	3	374	(0)	3522120
340	27.1	3.0	0.0	chr6	145735976	145736071	(25069908)	+	MIR3	SINE/MIR	89	187	(21)	3523127
2703	16.4	8.3	5.7	chr6	147448004	147448149	(23357830)	+	LTR8A	LTR/ERV1	1	167	(560)	3525417
3756	12.5	5.3	0.5	chr6	147448150	147448762	(23357217)	+	LTR9B	LTR/ERV1	1	644	(0)	3525418
14	14.4	1.8	8.9	chr6	148747132	148747186	(22058793)	+	G-rich	Low_complexity	1	56	(0)	3527384
14	8.0	3.5	3.3	chr6	148747761	148747789	(22058190)	+	(CGC)n	Simple_repeat	1	30	(0)	3527385
205	16.1	0.0	0.0	chr6	148820100	148820130	(21985849)	+	L2b	LINE/L2	3324	3354	(21)	3527495
4638	23.7	7.6	7.8	chr6	148820189	148820568	(21985411)	C	L1MC4	LINE/L1	(3)	8039	7708	3527496
16	32.6	0.0	0.0	chr6	149317603	149317663	(21488316)	+	G-rich	Low_complexity	1	61	(0)	3528246
56	30.4	1.3	2.6	chr6	149317784	149317804	(21488175)	+	(GCG)n	Simple_repeat	1	27	(203)	3528247
13	20.7	1.8	6.9	chr6	149317805	149317861	(21488118)	+	GA-rich	Low_complexity	1	58	(0)	3528248
56	30.4	1.3	2.6	chr6	149317862	149318010	(21487969)	+	(GCG)n	Simple_repeat	28	230	(0)	3528247
28	24.9	2.0	2.9	chr6	149566288	149566388	(21239591)	+	(CCCGC)n	Simple_repeat	1	100	(0)	3528682
976	26.2	6.4	5.4	chr6	149855095	149855610	(20950369)	+	PABL_B	LTR/ERV1	1	667	(0)	3529304
521	29.9	10.2	0.4	chr6	150135750	150135978	(20670001)	C	L2a	LINE/L2	(32)	3394	3111	3529736
1494	19.0	9.3	5.2	chr6	150136123	150136471	(20669508)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3529737
4524	19.3	1.3	1.0	chr6	150233276	150234138	(20571841)	C	MER6	DNA/TcMar-Tigger	(0)	865	1	3529885
1436	23.9	3.5	0.8	chr6	150277636	150277993	(20527986)	+	Cheshire	DNA/hAT-Charlie	32	399	(2021)	3529957
215	33.1	2.3	6.6	chr6	150322413	150322548	(20483431)	C	L2c	LINE/L2	(5)	3382	3253	3530034
335	29.2	19.7	3.2	chr6	152005585	152005803	(18800176)	C	MIRb	SINE/MIR	(3)	265	2	3532934
1444	13.2	1.7	1.3	chr6	152078029	152078265	(18727714)	+	THE1A	LTR/ERVL-MaLR	1	238	(117)	3533021
22994	7.9	1.6	0.6	chr6	152078503	152083797	(18722182)	+	L1PA6	LINE/L1	5	5332	(814)	3533022
18067	6.7	0.3	0.2	chr6	153518932	153521630	(17284349)	C	L1PA6	LINE/L1	(3461)	2685	1	3535027
1932	13.9	14.0	1.1	chr6	154493581	154493952	(16312027)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3536490
2519	12.9	0.8	0.8	chr6	154494067	154494441	(16311538)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3536491
19	8.3	0.0	0.0	chr6	154510937	154510962	(16295017)	+	(A)n	Simple_repeat	1	26	(0)	3536517
13	18.2	3.5	6.8	chr6	154733522	154733578	(16072401)	+	G-rich	Low_complexity	1	59	(0)	3536959
563	27.9	0.7	0.0	chr6	155100711	155100850	(15705129)	C	MIRb	SINE/MIR	(39)	229	89	3537635
243	21.3	0.0	0.0	chr6	155100852	155100898	(15705081)	C	MIRc	SINE/MIR	(137)	131	85	3537636
1974	16.8	0.3	0.0	chr6	155224945	155225254	(15580725)	C	AluSx	SINE/Alu	(0)	312	2	3537838
13205	8.7	1.9	2.8	chr6	155748283	155751196	(15054783)	+	L1P3	LINE/L1	1	2960	(3501)	3538526
251	27.8	4.3	1.1	chr6	156289982	156290072	(14515907)	+	MIR3	SINE/MIR	111	204	(4)	3539260
746	28.7	11.2	3.2	chr6	156601589	156602085	(14203894)	+	MLT2F	LTR/ERVL	40	581	(82)	3539701
262	19.1	0.0	0.0	chr6	156895642	156895704	(13910275)	C	L1ME3Cz	LINE/L1	(5)	992	930	3540156
17	10.9	5.3	6.7	chr6	157218600	157218656	(13587323)	+	(CTGAGG)n	Simple_repeat	1	60	(0)	3540562
13	4.7	0.0	4.2	chr6	157275099	157275122	(13530857)	+	(GGGA)n	Simple_repeat	1	24	(0)	3540654
12	27.6	3.9	0.0	chr6	157275184	157275235	(13530744)	+	(GAGGCGG)n	Simple_repeat	1	54	(0)	3540655
769	26.2	11.9	11.1	chr6	157275258	157275528	(13530451)	C	MLT1C	LTR/ERVL-MaLR	(38)	429	125	3540656
239	22.9	4.4	13.5	chr6	157471800	157471925	(13334054)	+	MIRb	SINE/MIR	120	233	(35)	3540968
35	14.0	6.7	2.1	chr6	157823035	157823124	(12982855)	+	(CGG)n	Simple_repeat	1	96	(0)	3541541
12	13.7	6.8	4.3	chr6	157823095	157823138	(12982841)	+	(GGCCGAG)n	Simple_repeat	1	47	(0)	3541542
14	21.6	4.7	0.0	chr6	157823308	157823350	(12982629)	+	(GCC)n	Simple_repeat	1	45	(0)	3541543
2478	9.6	1.0	0.0	chr6	157865059	157865359	(12940620)	+	AluSq	SINE/Alu	2	305	(8)	3541607
440	19.8	18.2	0.0	chr6	157865575	157865700	(12940279)	C	L1ME2z	LINE/L1	(3)	6441	6288	3541608
24	13.1	4.8	3.1	chr6	158536998	158537059	(12268920)	+	(GGACGG)n	Simple_repeat	1	65	(0)	3542687
517	25.3	1.4	1.4	chr6	158559670	158559817	(12246162)	C	Charlie4z	DNA/hAT-Charlie	(3)	164	17	3542738
12	9.7	0.0	0.0	chr6	158559885	158559906	(12246073)	+	(TCAT)n	Simple_repeat	1	22	(0)	3542739
13	14.3	10.9	0.0	chr6	158559991	158560036	(12245943)	+	(CCCGCGCG)n	Simple_repeat	1	51	(0)	3542740
13	27.4	2.0	1.9	chr6	158560131	158560179	(12245800)	+	(CGG)n	Simple_repeat	1	88	(0)	3542741
14	9.0	5.1	4.9	chr6	158560180	158560218	(12245761)	+	G-rich	Low_complexity	1	41	(0)	3542742
19	25.5	1.1	6.6	chr6	158644770	158644859	(12161120)	+	(GCCCC)n	Simple_repeat	1	91	(0)	3542863
13	15.7	0.0	7.3	chr6	158818816	158818856	(11987123)	+	G-rich	Low_complexity	1	41	(0)	3543167
182	27.5	10.8	4.5	chr6	159455347	159455502	(11350477)	+	MER5A	DNA/hAT-Charlie	2	168	(21)	3544090
330	25.0	15.9	0.0	chr6	159456190	159456305	(11349674)	+	MER5A1	DNA/hAT-Charlie	29	166	(0)	3544091
2124	17.0	7.5	1.6	chr6	159965026	159965462	(10840517)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	1	3544905
22906	7.3	0.5	0.1	chr6	160208729	160214880	(10591099)	C	L1PA6	LINE/L1	(0)	6154	1	3545193
7021	14.4	2.8	2.8	chr6	160570645	160572338	(10233641)	C	L1PA7	LINE/L1	(4326)	2173	1	3545562
11039	12.4	3.7	1.0	chr6	160572337	160574930	(10231049)	C	L1PBa1	LINE/L1	(3947)	2915	252	3545566
1224	11.9	1.7	0.0	chr6	160838952	160839127	(9966852)	C	AluSx	SINE/Alu	(0)	312	134	3545862
13	18.7	0.0	5.0	chr6	160931165	160931204	(9874775)	+	(GGCGCG)n	Simple_repeat	1	40	(0)	3545955
198	35.0	0.0	1.6	chr6	162429309	162429369	(8376610)	+	L2b	LINE/L2	3246	3305	(70)	3548134
234	34.7	3.3	4.8	chr6	162429705	162429828	(8376151)	+	L2a	LINE/L2	3301	3422	(4)	3548132
183	36.9	11.2	2.2	chr6	162429883	162430109	(8375870)	+	L2c	LINE/L2	2924	3173	(214)	3548135
200	32.1	10.7	3.0	chr6	163322276	163322597	(7483382)	+	L2a	LINE/L2	3062	3363	(12)	3549283
547	27.1	12.0	1.7	chr6	163897508	163897864	(6908115)	C	HAL1	LINE/L1	(0)	2507	2109	3550083
888	22.5	7.9	2.0	chr6	163897896	163898144	(6907835)	+	MLT1C	LTR/ERVL-MaLR	200	464	(3)	3550084
4662	9.9	0.0	1.1	chr6	163940862	163941501	(6864478)	+	MER41B	LTR/ERV1	1	633	(1)	3550141
2694	25.9	6.5	2.9	chr6	164614947	164616509	(6189470)	C	L1ME1	LINE/L1	(9)	6170	4554	3550981
1210	21.7	10.8	1.4	chr6	164616510	164616878	(6189101)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3550982
1753	28.7	6.2	3.1	chr6	164616879	164617144	(6188835)	C	L1ME1	LINE/L1	(1593)	4553	4273	3550981
11388	16.4	3.5	2.3	chr6	165049248	165051468	(5754511)	+	HUERS-P3b-int	LTR/ERV1	403	2652	(4766)	3551498
303	30.5	7.0	5.1	chr6	165228747	165228943	(5577036)	C	L2a	LINE/L2	(9)	3417	3217	3551705
200	31.1	2.8	1.9	chr6	165228988	165229092	(5576887)	C	L2a	LINE/L2	(301)	3086	2981	3551705
20	15.3	0.0	5.9	chr6	165229112	165229162	(5576817)	+	(TTTC)n	Simple_repeat	1	51	(0)	3551706
756	14.4	25.5	0.0	chr6	165229163	165229370	(5576609)	C	AluJb	SINE/Alu	(39)	273	13	3551707
23623	9.2	2.0	0.5	chr6	165283041	165288934	(5517045)	+	L1PA10	LINE/L1	1811	8142	(21)	3551776
2539	13.8	1.9	0.5	chr6	165319288	165319659	(5486320)	+	MER51B	LTR/ERV1	1	377	(0)	3551824
285	28.2	4.0	3.4	chr6	165469021	165469196	(5336783)	+	L4_A_Mam	LINE/RTE-X	3513	3689	(1301)	3551992
1170	19.4	3.2	3.5	chr6	165879551	165879873	(4926106)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	3552494
1813	27.6	3.1	4.9	chr6	166031586	166032426	(4773553)	+	L1MEc	LINE/L1	2425	3254	(3065)	3552699
3175	23.1	8.4	9.0	chr6	166032433	166033556	(4772423)	+	L1M4a2	LINE/L1	1	1117	(1539)	3552701
2208	11.9	0.0	1.0	chr6	166182178	166182487	(4623492)	+	AluSq2	SINE/Alu	1	307	(6)	3552898
5713	10.1	3.4	0.9	chr6	166182488	166183054	(4622925)	C	L1PREC2	LINE/L1	(79)	6081	5493	3552897
194	19.5	2.4	0.0	chr6	166561647	166561687	(4244292)	+	Tigger19b	DNA/TcMar-Tigger	60	101	(449)	3553396
465	5.6	0.0	0.0	chr6	166561717	166561770	(4244209)	C	MER30	DNA/hAT-Charlie	(0)	230	177	3553397
371	27.7	4.7	0.9	chr6	166561938	166562066	(4243913)	C	MIRb	SINE/MIR	(18)	250	111	3553398
4481	12.6	9.0	0.8	chr6	166971894	166973218	(3832761)	C	MER51-int	LTR/ERV1	(6381)	1435	1	3553845
3460	13.1	5.2	0.0	chr6	166986045	166986571	(3819408)	C	MER21A	LTR/ERVL	(0)	931	376	3553871
1352	11.4	5.4	0.9	chr6	166986577	166986788	(3819191)	C	MER21A	LTR/ERVL	(667)	264	43	3553871
251	28.0	8.7	8.2	chr6	167699521	167699726	(3106253)	+	MLT1K	LTR/ERVL-MaLR	373	579	(16)	3554671
12	12.2	3.7	0.0	chr6	168116781	168116807	(2689172)	+	(GCAGA)n	Simple_repeat	1	28	(0)	3555156
1893	16.8	10.3	4.0	chr6	168333456	168333852	(2472127)	C	MSTA	LTR/ERVL-MaLR	(2)	426	2	3555384
2049	10.7	2.7	0.0	chr6	169227800	169228089	(1577890)	+	AluSq	SINE/Alu	1	298	(15)	3556255
9625	10.2	1.5	1.1	chr6	169434576	169435889	(1370090)	+	THE1B-int	LTR/ERVL-MaLR	261	1580	(0)	3556446
12	24.6	1.7	5.1	chr6	170306579	170306584	(499395)	+	(GCCGGC)n	Simple_repeat	1	58	(0)	3557310
14	19.1	3.9	3.8	chr6	170306585	170306635	(499344)	+	(GCGTCC)n	Simple_repeat	1	53	(0)	3557311
13	28.8	0.0	0.0	chr6	170306744	170306824	(499155)	+	(GCGGAG)n	Simple_repeat	1	81	(0)	3557312
13	26.8	2.2	0.0	chr6	170584448	170584492	(221487)	+	(CCCG)n	Simple_repeat	1	46	(0)	3557615
27	23.6	5.3	2.5	chr7	149147	149260	(159196713)	+	(GCCTGC)n	Simple_repeat	1	120	(0)	3558013
289	27.7	6.3	0.0	chr7	214581	214699	(159131274)	+	MIR3	SINE/MIR	61	187	(21)	3558077
205	29.6	10.3	0.3	chr7	214900	214985	(159130988)	C	L2b	LINE/L2	(0)	3387	3290	3558078
329	23.4	8.8	0.0	chr7	301528	301647	(159044326)	C	MIR	SINE/MIR	(47)	161	24	3558161
2456	6.5	0.7	0.0	chr7	682464	682757	(158663216)	+	AluY	SINE/Alu	1	296	(15)	3558710
14	17.6	0.0	0.0	chr7	726723	726754	(158619219)	+	(GGTGGC)n	Simple_repeat	1	32	(0)	3558809
12	18.5	0.0	7.1	chr7	816826	816867	(158529106)	+	(CCGCC)n	Simple_repeat	1	42	(0)	3558956
19	23.1	1.6	3.1	chr7	816948	817011	(158528962)	+	G-rich	Low_complexity	1	65	(0)	3558957
939	21.8	15.6	0.0	chr7	817134	817376	(158528597)	C	AluJo	SINE/Alu	(20)	292	5	3558958
830	27.3	4.5	2.1	chr7	1174984	1175264	(158170709)	C	ERV3-16A3_I-int	LTR/ERVL	(1542)	3684	3397	3559429
26	0.0	0.0	0.0	chr7	1504782	1504806	(157841167)	+	(AAT)n	Simple_repeat	1	25	(0)	3559982
1534	16.4	4.4	4.1	chr7	1626003	1626184	(157719789)	C	AluJo	SINE/Alu	(19)	293	105	3560204
2159	11.9	0.0	0.3	chr7	1626185	1626479	(157719494)	+	AluSz	SINE/Alu	1	294	(18)	3560205
70	3.0	0.0	0.0	chr7	1711559	1711627	(157634346)	+	(AG)n	Simple_repeat	1	69	(0)	3560353
406	21.7	5.4	0.0	chr7	1940735	1940840	(157405133)	C	MER58B	DNA/hAT-Charlie	(179)	162	51	3560644
9218	3.9	0.5	9.9	chr7	2161104	2162602	(157183371)	+	SVA_B	Retroposon/SVA	24	1381	(2)	3560848
38	13.9	0.0	0.0	chr7	2513217	2513281	(156832692)	+	(ATGG)n	Simple_repeat	1	65	(0)	3561566
422	19.5	2.5	11.9	chr7	2684235	2684368	(156661605)	C	MLT1C	LTR/ERVL-MaLR	(285)	182	62	3561834
237	21.1	1.9	0.0	chr7	2684414	2684465	(156661508)	C	MIR	SINE/MIR	(131)	131	79	3561838
2553	3.7	1.7	0.0	chr7	2684873	2685167	(156660806)	C	AluYm1	SINE/Alu	(11)	300	1	3561839
1485	17.4	5.3	3.7	chr7	3103537	3103653	(156242320)	C	AluJo	SINE/Alu	(193)	119	4	3562679
207	25.6	0.0	0.0	chr7	3103871	3103913	(156242060)	C	MIR3	SINE/MIR	(61)	147	105	3562681
1136	18.0	9.3	11.1	chr7	3575102	3575463	(155770510)	C	MLT1A	LTR/ERVL-MaLR	(16)	358	4	3563504
342	29.9	5.5	3.1	chr7	3979065	3979224	(155366749)	+	MIRb	SINE/MIR	3	186	(82)	3564093
306	33.0	0.6	0.0	chr7	3979413	3979514	(155366459)	+	L2a	LINE/L2	3258	3412	(14)	3564094
708	31.0	7.1	6.3	chr7	4344512	4345000	(155000973)	+	L1M7	LINE/L1	6	498	(5720)	3564627
26	6.3	0.0	0.0	chr7	4345079	4345112	(155000861)	+	(T)n	Simple_repeat	1	34	(0)	3564628
535	26.9	9.8	8.9	chr7	4345123	4345514	(155000459)	+	MLT1J	LTR/ERVL-MaLR	68	463	(49)	3564629
266	20.6	8.7	0.0	chr7	4345559	4345621	(155000352)	+	MLT1J-int	LTR/ERVL-MaLR	2	70	(1317)	3564629
13	21.9	2.3	2.2	chr7	5556699	5556742	(153789231)	+	G-rich	Low_complexity	1	45	(0)	3567328
12	25.6	0.0	0.0	chr7	6105466	6105502	(153240471)	+	(CCGCCCG)n	Simple_repeat	1	37	(0)	3568623
354	22.1	5.8	4.2	chr7	6463314	6463431	(152882542)	+	Charlie23a	DNA/hAT-Charlie	172	291	(48)	3569435
1869	14.7	0.3	4.9	chr7	6463449	6463774	(152882199)	+	AluJr	SINE/Alu	1	311	(1)	3569436
179	0.0	3.4	0.0	chr7	6577112	6577287	(152768686)	+	(ATAAA)n	Simple_repeat	1	182	(0)	3569724
2179	9.6	1.3	0.3	chr7	6577829	6578129	(152767844)	C	AluSq	SINE/Alu	(9)	304	1	3569725
592	24.6	16.2	9.0	chr7	6640200	6640224	(152705749)	+	MSTB	LTR/ERVL-MaLR	1	26	(431)	3569872
12	16.6	2.8	2.7	chr7	6653466	6653501	(152692472)	+	(CGGCGCC)n	Simple_repeat	1	37	(0)	3569886
181	33.1	12.4	3.0	chr7	6705941	6706108	(152639865)	+	MIR3	SINE/MIR	20	205	(3)	3569974
13	20.1	5.0	0.0	chr7	6706693	6706732	(152639241)	+	(CCG)n	Simple_repeat	1	42	(0)	3569975
18	19.9	2.2	0.0	chr7	6730018	6730063	(152615910)	+	(GGCGGA)n	Simple_repeat	1	47	(0)	3570020
1826	17.2	1.4	7.0	chr7	6875625	6879552	(152466421)	+	SATR2	Satellite	1	3706	(47)	3570321
12880	9.9	0.5	2.4	chr7	7041834	7044246	(152301727)	+	L1P3	LINE/L1	5	2419	(4080)	3570561
1900	17.7	6.5	7.0	chr7	7061446	7070359	(152275614)	+	SATR1	Satellite	1	8676	(3)	3570592
432	27.3	16.4	6.0	chr7	7566192	7566577	(151779396)	+	L2b	LINE/L2	2940	3373	(2)	3571258
13	4.1	0.0	9.7	chr7	8261747	8261777	(151084196)	+	(GGTG)n	Simple_repeat	1	31	(0)	3572278
12	16.0	0.0	3.3	chr7	8262052	8262081	(151083892)	+	(CCCGC)n	Simple_repeat	1	30	(0)	3572279
21653	8.5	1.3	0.7	chr7	10960102	10966227	(148379746)	C	L1PA6	LINE/L1	(11)	6143	5	3575576
2153	14.7	2.8	0.0	chr7	10966240	10966587	(148379386)	C	LTR2752	LTR/ERV1	(905)	358	1	3575574
442	25.0	10.6	2.0	chr7	10966588	10966714	(148379259)	C	LTR67B	LTR/ERVL	(448)	172	32	3575573
2430	30.6	6.2	3.7	chr7	11093183	11094189	(148251784)	C	L1MCc	LINE/L1	(5604)	1524	396	3575770
1459	22.2	15.4	2.5	chr7	11094190	11094624	(148251349)	C	MLT1D	LTR/ERVL-MaLR	(4)	501	1	3575771
12	9.3	8.3	2.6	chr7	11636211	11636246	(147709727)	+	(TTCTGT)n	Simple_repeat	1	39	(0)	3576434
923	18.2	4.7	1.8	chr7	11748687	11748915	(147597058)	C	MER45R	DNA/hAT-Tip100	(46)	1535	1300	3576558
23777	7.8	0.5	0.3	chr7	12427747	12432489	(146913484)	C	L1PA6	LINE/L1	(1395)	4924	174	3577360
2469	13.0	2.8	0.0	chr7	12675667	12676050	(146669923)	+	L1P2	LINE/L1	1	395	(5789)	3577673
8644	5.1	0.3	0.3	chr7	12676046	12677522	(146668451)	+	L1P2	LINE/L1	1152	2612	(3534)	3577673
22962	11.1	2.2	3.2	chr7	13668088	13674469	(145671504)	C	L1PA7	LINE/L1	(16)	6453	13	3579030
11926	12.1	1.7	1.1	chr7	16248597	16252056	(143093917)	+	L1PA6	LINE/L1	14	3501	(2830)	3582249
4610	11.9	0.3	0.0	chr7	16571393	16572091	(142773882)	+	L1PA7	LINE/L1	1	701	(5760)	3582663
5589	15.3	3.3	0.6	chr7	17847928	17848873	(141497100)	+	LTR1D	LTR/ERV1	4	975	(0)	3584431
2720	30.9	8.2	3.3	chr7	17848874	17850023	(141495950)	+	L2a	LINE/L2	2135	3349	(77)	3584430
7709	20.1	3.7	2.1	chr7	18601018	18602889	(140743084)	C	L1MC2	LINE/L1	(1532)	4789	2888	3585552
18	27.5	1.2	4.8	chr7	19144135	19144216	(140201757)	+	G-rich	Low_complexity	1	83	(0)	3586190
9804	11.2	3.7	0.1	chr7	19478705	19480142	(139865831)	C	L1P2	LINE/L1	(4686)	1498	8	3586572
3100	11.8	14.6	0.6	chr7	19653808	19654326	(139691647)	C	LTR12	LTR/ERV1	(222)	604	1	3586751
4184	7.9	0.0	0.0	chr7	19654327	19654857	(139691116)	C	HERV9-int	LTR/ERV1	(0)	5374	4844	3586751
25184	6.8	0.5	0.1	chr7	19900579	19906684	(139439289)	C	L1PA4	LINE/L1	(25)	6130	1	3587038
915	12.8	2.0	0.0	chr7	20548838	20548985	(138796988)	+	HERVH-int	LTR/ERV1	3140	3290	(4423)	3587914
8232	16.3	1.5	1.5	chr7	20548976	20550699	(138795274)	+	HERVH-int	LTR/ERV1	3478	5364	(1290)	3587914
20	12.2	2.0	5.9	chr7	21543351	21543400	(137802573)	+	GA-rich	Low_complexity	1	51	(0)	3589425
304	28.7	9.4	1.7	chr7	21946552	21946668	(137399305)	C	L2b	LINE/L2	(8)	3367	3241	3589934
1001	19.5	1.6	2.5	chr7	22913830	22914257	(136431716)	+	HERVH-int	LTR/ERV1	1	459	(7254)	3591449
11696	14.1	1.1	1.2	chr7	22914318	22916350	(136429623)	+	HERVH-int	LTR/ERV1	801	2830	(4883)	3591449
17	22.5	5.9	0.0	chr7	23381873	23381914	(135964059)	+	A-rich	Low_complexity	29	71	(0)	3592218
1974	15.9	4.6	0.0	chr7	23381974	23382262	(135963711)	+	AluJb	SINE/Alu	1	303	(9)	3592219
8657	13.7	4.9	2.4	chr7	25190721	25193431	(134152542)	C	MER51-int	LTR/ERV1	(1802)	6014	1950	3595076
338	29.4	19.7	0.5	chr7	25215627	25215814	(134130159)	C	L3	LINE/CR1	(19)	4080	3848	3595120
960	14.0	0.0	3.8	chr7	26118887	26119043	(133226930)	+	AluJb	SINE/Alu	156	306	(6)	3596454
547	28.8	12.6	0.9	chr7	26119219	26119428	(133226545)	C	MIRb	SINE/MIR	(18)	250	13	3596455
1121	22.1	7.4	3.2	chr7	26399412	26399720	(132946253)	+	MER33	DNA/hAT-Charlie	1	323	(1)	3596983
22	15.4	0.0	0.0	chr7	27107833	27107868	(132238105)	+	A-rich	Low_complexity	1	36	(0)	3598026
16	11.7	0.0	0.0	chr7	27246065	27246092	(132099881)	+	(CGC)n	Simple_repeat	1	28	(0)	3598163
2676	9.2	1.9	0.0	chr7	28263912	28264281	(131081692)	+	MER51B	LTR/ERV1	1	377	(0)	3599789
493	32.6	4.1	4.5	chr7	28264282	28264389	(131081584)	+	MIRb	SINE/MIR	162	268	(0)	3599788
563	21.6	0.3	2.1	chr7	28710482	28710641	(130635332)	+	FLAM_C	SINE/Alu	1	212	(90)	3600466
17	14.7	6.7	0.0	chr7	28710821	28710865	(130635108)	+	(TTGA)n	Simple_repeat	1	48	(0)	3600467
14	17.5	0.0	0.0	chr7	28956670	28956701	(130389272)	+	(CTGCAG)n	Simple_repeat	1	32	(0)	3600827
1348	13.6	8.9	0.8	chr7	29527995	29528231	(129817742)	C	MSTA	LTR/ERVL-MaLR	(0)	428	171	3601758
7220	11.4	2.4	2.0	chr7	29528240	29529868	(129816105)	+	L1PA6	LINE/L1	174	2031	(4326)	3601759
28441	2.1	0.0	0.0	chr7	29579937	29585963	(129760010)	+	L1PA2	LINE/L1	126	6155	(0)	3601808
13	24.6	5.1	1.6	chr7	29685300	29685358	(129660615)	+	(GGCGCCC)n	Simple_repeat	1	62	(0)	3601964
12	18.5	0.0	9.6	chr7	30028708	30028759	(129317214)	+	G-rich	Low_complexity	1	52	(0)	3602520
12	12.6	0.0	3.6	chr7	30028809	30028836	(129317137)	+	(GGCCG)n	Simple_repeat	1	28	(0)	3602521
2203	13.0	2.9	2.9	chr7	30172197	30172575	(129173398)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	3602731
12	12.7	8.5	3.9	chr7	30284482	30284528	(129061445)	+	(GGCGGA)n	Simple_repeat	1	51	(0)	3602921
4089	10.1	3.7	0.2	chr7	30413624	30414196	(128931777)	+	LTR27B	LTR/ERV1	1	594	(0)	3603107
228	27.4	11.1	3.8	chr7	30914699	30914831	(128431142)	+	AmnSINE1	SINE/5S-Deu-L2	2	145	(430)	3603860
189	30.5	8.0	0.0	chr7	30914998	30915092	(128430881)	+	MIRc	SINE/MIR	47	152	(116)	3603861
211	24.1	12.1	0.0	chr7	31101757	31101814	(128244159)	C	L2c	LINE/L2	(61)	3326	3261	3604153
17	23.6	0.0	3.8	chr7	31101974	31102026	(128243947)	+	(CTC)n	Simple_repeat	1	53	(0)	3604154
393	26.5	6.4	4.3	chr7	32054251	32054395	(127291578)	+	MIRb	SINE/MIR	14	169	(39)	3605583
25804	3.0	0.2	0.3	chr7	32682679	32688715	(126657258)	C	L1PA2	LINE/L1	(1)	6154	127	3606632
325	10.6	0.0	0.0	chr7	32688716	32688762	(126657211)	+	THE1D-int	LTR/ERVL-MaLR	287	333	(1298)	3606631
1859	13.2	4.5	7.8	chr7	32688764	32689116	(126656857)	+	THE1D	LTR/ERVL-MaLR	1	346	(35)	3606631
14	21.7	4.0	1.9	chr7	32942604	32942653	(126403320)	+	(GCCGCG)n	Simple_repeat	1	52	(0)	3607043
12	16.8	0.0	10.2	chr7	32943209	32943257	(126402716)	+	G-rich	Low_complexity	1	49	(0)	3607044
24383	7.8	0.6	0.4	chr7	34813936	34820307	(124525666)	+	L1PA6	LINE/L1	1	6331	(3)	3609782
17	22.8	3.1	3.0	chr7	35254198	35254262	(124091711)	+	G-rich	Low_complexity	1	67	(0)	3610384
18	15.8	8.6	1.6	chr7	36153193	36153250	(123192723)	+	(GCG)n	Simple_repeat	1	63	(0)	3611822
18	29.2	1.5	1.4	chr7	36153375	36153442	(123192531)	+	(CGC)n	Simple_repeat	1	69	(0)	3611823
688	28.1	9.2	2.1	chr7	38198287	38198519	(121147454)	C	MER102b	DNA/hAT-Charlie	(58)	283	33	3614772
1172	19.5	6.1	0.4	chr7	38885727	38886004	(120459969)	+	L1MDa	LINE/L1	1161	1455	(5085)	3615762
16783	8.4	1.0	0.7	chr7	38886033	38888928	(120457045)	+	L1P2	LINE/L1	5	2890	(3256)	3615763
25570	6.5	0.3	0.0	chr7	40333761	40339892	(119006081)	C	L1PA5	LINE/L1	(4)	6150	3	3618283
530	28.6	3.4	2.8	chr7	42343919	42344094	(117001879)	+	MIRb	SINE/MIR	64	240	(28)	3621106
13026	9.4	0.6	1.3	chr7	42863739	42865885	(116480088)	C	L1PA7	LINE/L1	(4332)	2167	8	3621779
2494	6.4	0.0	1.0	chr7	43331309	43331606	(116014367)	+	AluY	SINE/Alu	1	295	(16)	3622484
239	30.3	13.7	1.5	chr7	44276822	44276955	(115069018)	+	MIRc	SINE/MIR	63	215	(53)	3624016
368	33.7	11.2	0.3	chr7	44328722	44328942	(115017031)	C	MIR	SINE/MIR	(8)	260	3	3624068
517	33.3	15.1	0.9	chr7	44328961	44329305	(115016668)	C	L2a	LINE/L2	(20)	3406	3004	3624069
2035	10.4	5.9	0.3	chr7	44781793	44782081	(114563892)	C	AluSc8	SINE/Alu	(4)	307	2	3624839
2162	12.9	13.1	0.8	chr7	45651918	45652292	(113693681)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3626195
17	26.5	5.6	0.0	chr7	47582145	47582216	(111763757)	+	(GCCCGC)n	Simple_repeat	1	76	(0)	3628705
258	30.2	3.6	0.9	chr7	47979832	47979938	(111366035)	+	Charlie21a	DNA/hAT-Charlie	27	136	(1077)	3629309
1387	28.1	4.9	3.0	chr7	49689186	49689383	(109656590)	C	L1ME4b	LINE/L1	(1)	891	684	3631442
1972	15.7	0.0	0.7	chr7	49689384	49689682	(109656291)	C	AluJr	SINE/Alu	(15)	297	1	3631443
23389	11.2	2.2	2.5	chr7	50040365	50042896	(109303077)	+	L1PA7	LINE/L1	2	2550	(3949)	3631902
20	9.3	6.0	3.8	chr7	50725033	50725082	(108620891)	+	(TGCC)n	Simple_repeat	1	53	(0)	3632699
1753	17.2	13.3	1.1	chr7	50725095	50725469	(108620504)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3632700
2130	24.8	10.4	3.8	chr7	50885931	50886926	(108459047)	+	L1MC4a	LINE/L1	6255	7159	(723)	3632934
18862	7.2	0.2	0.2	chr7	50886928	50891666	(108454307)	+	L1PA6	LINE/L1	75	4799	(1347)	3632935
3501	24.2	7.7	2.1	chr7	51280022	51280999	(108064974)	+	L1PA16	LINE/L1	42	1071	(5569)	3633424
512	18.9	6.6	5.6	chr7	51317282	51317460	(108028513)	+	MER5A	DNA/hAT-Charlie	5	185	(4)	3633474
233	9.7	0.0	0.0	chr7	51317628	51317658	(108028315)	+	MADE2	DNA/TcMar-Mariner	42	72	(8)	3633475
886	19.3	3.5	0.0	chr7	51318082	51318247	(108027726)	+	AluJo	SINE/Alu	2	173	(139)	3633476
20716	9.9	1.4	3.2	chr7	51533171	51537238	(107808735)	C	L1PA7	LINE/L1	(2367)	4094	4	3633812
385	26.4	13.8	0.0	chr7	55120575	55120699	(104225274)	+	L2b	LINE/L2	3230	3374	(1)	3638217
13	16.3	2.8	2.7	chr7	55365947	55365982	(103979991)	+	(CGG)n	Simple_repeat	1	37	(0)	3638526
3652	14.7	12.0	0.4	chr7	55823016	55823693	(103522280)	+	LTR27C	LTR/ERV1	1	767	(0)	3639280
2427	12.6	0.8	4.3	chr7	55823694	55823877	(103522096)	+	MER83	LTR/ERV1	200	383	(65)	3639279
678	9.4	0.0	4.2	chr7	55823886	55823981	(103521992)	C	AluSz6	SINE/Alu	(11)	301	210	3639281
2499	8.4	0.3	0.0	chr7	55951348	55951657	(103394316)	+	AluSz	SINE/Alu	1	311	(1)	3639567
285	26.0	7.6	0.0	chr7	55952299	55952371	(103393602)	C	MIRb	SINE/MIR	(79)	189	111	3639568
2102	7.6	0.0	5.5	chr7	56115478	56115767	(103230206)	C	AluSc	SINE/Alu	(33)	276	3	3639971
425	30.2	8.6	1.4	chr7	57305212	57305352	(102040621)	C	MIRb	SINE/MIR	(63)	205	54	3642164
361	25.2	16.8	0.7	chr7	57305580	57305719	(102040254)	C	MIRb	SINE/MIR	(45)	223	57	3642165
347	18.2	0.0	0.0	chr7	57495188	57495242	(101850731)	+	AluYj4	SINE/Alu	225	279	(32)	3642545
367	17.7	3.1	0.0	chr7	57495408	57495469	(101850504)	+	AluYj4	SINE/Alu	226	289	(22)	3642546
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
938	20.7	1.0	0.5	chr7	57751809	57754525	(101591448)	C	ALR/Alpha	Satellite/centr	(18)	2730	1	3642955
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
1514	15.2	4.7	5.3	chr7	64314570	64314872	(95031101)	C	AluJb	SINE/Alu	(11)	301	1	3646143
1865	19.0	2.7	9.7	chr7	64314873	64314891	(95031082)	C	MER57E3	LTR/ERV1	(58)	429	419	3646142
1631	18.6	11.9	1.3	chr7	64314892	64315272	(95030701)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	3646144
410	15.5	2.7	0.0	chr7	64321965	64322035	(95023938)	C	LTR56	LTR/ERV1	(171)	274	202	3646154
9759	4.8	1.0	5.7	chr7	64553597	64555006	(94790967)	+	SVA_B	Retroposon/SVA	40	1383	(0)	3646421
6753	19.0	1.7	3.6	chr7	64619247	64620877	(94725096)	+	HUERS-P3-int	LTR/ERV1	768	2652	(6267)	3646517
299	28.8	11.9	11.5	chr7	66459519	66459718	(92886255)	+	MLT1O	LTR/ERVL-MaLR	4	204	(338)	3650039
308	31.2	1.0	0.0	chr7	66460165	66460260	(92885713)	+	MIRb	SINE/MIR	45	141	(127)	3650040
2098	13.4	12.6	1.6	chr7	67104199	67104578	(92241395)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3651516
558	27.8	4.7	6.9	chr7	68508838	68509113	(90836860)	+	MLT1G	LTR/ERVL-MaLR	36	310	(285)	3654615
315	22.7	0.5	1.5	chr7	68509122	68509206	(90836767)	+	MLT1G3	LTR/ERVL-MaLR	219	313	(282)	3654616
323	18.4	0.0	0.0	chr7	68509205	68509253	(90836720)	+	MLT1G	LTR/ERVL-MaLR	248	296	(295)	3654617
258	26.0	0.0	0.0	chr7	68509255	68509304	(90836669)	+	MLT1G	LTR/ERVL-MaLR	252	301	(290)	3654617
366	12.1	6.5	0.0	chr7	68509296	68509353	(90836620)	+	MLT1G3	LTR/ERVL-MaLR	249	310	(285)	3654618
283	22.2	0.0	0.0	chr7	68509355	68509408	(90836565)	+	MLT1G	LTR/ERVL-MaLR	260	313	(282)	3654617
1063	27.0	1.6	0.4	chr7	68509407	68509659	(90836314)	+	MLT1G	LTR/ERVL-MaLR	248	503	(88)	3654619
2348	11.2	0.0	0.3	chr7	69472495	69472805	(89873168)	C	AluSx	SINE/Alu	(0)	312	3	3656761
1925	16.0	0.3	1.0	chr7	69472820	69473126	(89872847)	C	AluJb	SINE/Alu	(0)	312	8	3656762
339	31.1	8.5	3.7	chr7	71424114	71424303	(87921670)	C	MamTip2	DNA/hAT-Tip100	(22)	283	84	3660163
2254	11.0	0.3	0.0	chr7	71941917	71942216	(87403757)	+	AluSx	SINE/Alu	1	301	(11)	3661286
306	33.7	4.0	5.4	chr7	71942623	71942757	(87403216)	+	L1ME5	LINE/L1	5771	5909	(285)	3661287
343	36.0	15.8	3.6	chr7	72742847	72743489	(86602484)	C	L2	LINE/L2	(711)	2708	1973	3662974
12	16.4	2.8	2.7	chr7	72879588	72879623	(86466350)	+	(AGGCGG)n	Simple_repeat	1	37	(0)	3663268
317	27.6	8.7	3.5	chr7	72880255	72880427	(86465546)	C	MIR3	SINE/MIR	(7)	201	19	3663269
300	34.8	14.5	3.8	chr7	73673332	73673434	(85672539)	+	L3	LINE/CR1	3929	4025	(74)	3665216
2370	9.3	0.3	0.6	chr7	73673816	73674128	(85671845)	C	AluSp	SINE/Alu	(0)	313	2	3665218
14	12.3	5.4	2.6	chr7	74174287	74174323	(85171650)	+	(GGC)n	Simple_repeat	1	39	(0)	3666408
1099	14.3	0.0	0.0	chr7	74388810	74388963	(84957010)	+	AluJo	SINE/Alu	137	290	(22)	3666951
2384	10.0	0.0	0.0	chr7	74508410	74508709	(84837264)	+	AluSx3	SINE/Alu	1	300	(11)	3667261
1601	14.2	0.0	1.2	chr7	75612844	75613089	(83732884)	+	AluJr	SINE/Alu	23	265	(47)	3670048
19	8.3	0.0	0.0	chr7	75613090	75613115	(83732858)	+	(CA)n	Simple_repeat	1	26	(0)	3670049
17	9.6	0.0	5.4	chr7	75613116	75613152	(83732821)	+	A-rich	Low_complexity	1	37	(0)	3670050
13	19.1	0.0	0.0	chr7	75987496	75987525	(83358448)	+	(GACA)n	Simple_repeat	1	30	(0)	3671060
302	34.7	8.5	1.3	chr7	76803851	76804078	(82541895)	C	L2c	LINE/L2	(934)	2485	2240	3672771
12	13.7	0.0	0.0	chr7	77537368	77537391	(81808582)	+	(GCC)n	Simple_repeat	1	24	(0)	3673973
917	21.4	3.9	4.8	chr7	77979080	77979270	(81366703)	+	Charlie1a	DNA/hAT-Charlie	1263	1455	(0)	3674809
670	27.4	15.0	8.0	chr7	77979308	77979823	(81366150)	+	MER34B	LTR/ERV1	5	563	(2)	3674811
21668	10.1	2.1	0.7	chr7	80019832	80026217	(79319756)	+	L1PA7	LINE/L1	8	6469	(0)	3677546
388	24.8	2.7	6.5	chr7	80403798	80403952	(78942021)	+	LTR23	LTR/ERV1	3	151	(286)	3678143
618	30.5	9.1	5.0	chr7	80771388	80771725	(78574248)	C	L3	LINE/CR1	(3712)	387	35	3678603
271	21.1	3.7	0.0	chr7	80771829	80771880	(78574093)	+	MER45C	DNA/hAT-Tip100	1	54	(899)	3678607
2127	14.0	0.3	0.0	chr7	81478153	81478459	(77867514)	+	AluSx1	SINE/Alu	1	308	(4)	3679581
16110	8.9	2.7	0.9	chr7	81478472	81481597	(77864376)	+	L1P2	LINE/L1	178	3345	(2974)	3679582
4073	15.6	6.9	0.0	chr7	82391963	82392676	(76953297)	+	LTR27C	LTR/ERV1	1	767	(0)	3680823
8240	4.2	15.4	2.2	chr7	83124708	83125903	(76220070)	+	SVA_B	Retroposon/SVA	1	1383	(0)	3681852
3275	24.4	7.0	5.0	chr7	85748966	85750652	(73595321)	+	L1PA7	LINE/L1	644	2076	(5258)	3685163
6836	10.2	1.9	0.3	chr7	85790915	85791880	(73554093)	+	L1P2	LINE/L1	5	986	(5198)	3685198
1000	33.3	13.8	6.2	chr7	86781863	86783296	(72562677)	C	L3	LINE/CR1	(1045)	3054	1495	3686372
9706	17.8	3.5	0.8	chr7	87328262	87329677	(72016296)	C	LTR25-int	LTR/ERV1	(5427)	1761	319	3687051
5097	12.6	4.2	3.9	chr7	87329678	87330454	(72015519)	C	LTR17	LTR/ERV1	(0)	780	1	3687052
13	20.9	3.8	3.6	chr7	88220048	88220100	(71125873)	+	(GCCCT)n	Simple_repeat	1	55	(0)	3688231
27445	13.9	3.9	1.9	chr7	88542536	88547643	(70798330)	C	HUERS-P3-int	LTR/ERV1	(2360)	5311	4	3688697
22117	10.6	1.3	1.2	chr7	89539789	89545123	(69800850)	+	L1PA7	LINE/L1	130	5498	(963)	3689940
8630	20.2	3.6	1.0	chr7	89621104	89624152	(69721821)	+	L1PA16	LINE/L1	4	2462	(4391)	3690028
13329	16.0	3.5	5.3	chr7	89856626	89859280	(69486693)	+	HUERS-P3b-int	LTR/ERV1	18	2623	(4795)	3690297
1418	24.7	1.3	0.0	chr7	90194319	90194618	(69151355)	C	HERV4_I-int	LTR/ERV1	(2582)	3957	3654	3690740
443	32.6	4.0	3.5	chr7	90194754	90194953	(69151020)	C	HERV4_I-int	LTR/ERV1	(5649)	890	690	3690740
8840	9.8	13.4	0.2	chr7	90334240	90335607	(69010366)	+	LTR12C	LTR/ERV1	3	1579	(0)	3690937
25752	4.2	0.5	0.1	chr7	91506737	91512867	(67833106)	+	L1PA3	LINE/L1	1	6155	(0)	3692538
26107	2.8	0.0	0.0	chr7	91583271	91589300	(67756673)	+	L1PA2	LINE/L1	124	6154	(1)	3692629
26479	2.4	0.0	0.0	chr7	91903683	91909706	(67436267)	C	L1PA2	LINE/L1	(5)	6150	127	3693051
1471	25.1	5.5	4.9	chr7	91909836	91909847	(67436126)	C	HAL1	LINE/L1	(489)	2018	2008	3693050
1746	17.6	0.3	2.3	chr7	91909848	91910148	(67435825)	C	AluJr	SINE/Alu	(17)	295	1	3693052
16	31.2	0.0	0.0	chr7	92246063	92246121	(67099852)	+	(GGCGGT)n	Simple_repeat	1	59	(0)	3693578
13	24.4	4.2	0.0	chr7	92246093	92246140	(67099833)	+	G-rich	Low_complexity	1	50	(0)	3693579
405	34.7	1.0	6.9	chr7	92869000	92869156	(66476817)	+	LTR33	LTR/ERVL	77	222	(293)	3694516
12549	14.5	1.3	1.6	chr7	92887021	92889845	(66456128)	C	L1PA10	LINE/L1	(3674)	2787	1	3694532
11449	11.9	2.2	0.6	chr7	92925365	92927142	(66418831)	C	L1P3	LINE/L1	(4669)	1801	4	3694580
22568	6.0	0.7	0.1	chr7	93108336	93114446	(66231527)	+	L1PA5	LINE/L1	4	6139	(15)	3694839
24294	7.0	0.9	0.2	chr7	93658039	93664170	(65681803)	C	L1PA6	LINE/L1	(0)	6327	177	3695542
265	38.1	4.9	8.5	chr7	94289912	94290275	(65055698)	C	L2c	LINE/L2	(44)	3343	2994	3696408
15963	7.5	2.0	1.0	chr7	95376778	95379224	(63966749)	+	L1P2	LINE/L1	5	2459	(3687)	3697858
3384	27.6	9.5	2.8	chr7	95672277	95674161	(63671812)	+	L1MEd	LINE/L1	511	2537	(3782)	3698326
17	8.1	0.0	0.0	chr7	96322039	96322064	(63023909)	+	(CGG)n	Simple_repeat	1	26	(0)	3699180
18	17.6	0.0	0.0	chr7	97009682	97009713	(62336260)	+	(T)n	Simple_repeat	1	32	(0)	3700158
24	9.1	2.8	0.0	chr7	97010185	97010220	(62335753)	+	(TC)n	Simple_repeat	1	37	(0)	3700159
29230	10.1	0.9	1.3	chr7	97951319	97955393	(61390580)	C	HERVE-int	LTR/ERV1	(2648)	5165	1108	3701553
2078	18.4	2.7	4.5	chr7	97958235	97966025	(61379948)	+	SATR2	Satellite	1	7653	(4)	3701556
2188	12.0	0.3	0.3	chr7	98343116	98343248	(61002725)	+	AluSx1	SINE/Alu	1	134	(178)	3702360
81	31.2	2.1	5.0	chr7	98400244	98400714	(60945259)	+	G-rich	Low_complexity	1	481	(0)	3702486
2307	16.8	7.6	4.6	chr7	99582056	99586467	(59759506)	C	SATR1	Satellite	(185)	9671	5531	3705056
2013	17.4	8.0	6.7	chr7	99956831	99958828	(59387145)	+	SATR1	Satellite	1	2025	(45)	3705563
2191	15.9	9.7	1.9	chr7	99958745	99963303	(59382670)	+	SATR1	Satellite	1	4911	(0)	3705563
6165	12.6	2.3	2.3	chr7	100217447	100218453	(59127520)	C	LTR13	LTR/ERVK	(0)	1007	1	3706084
1962	14.5	0.7	0.7	chr7	100606047	100606342	(58739631)	+	AluJb	SINE/Alu	1	296	(16)	3706935
290	23.3	5.7	3.3	chr7	100912494	100912613	(58433360)	+	MER107	DNA/hAT-Charlie	51	173	(27)	3707630
1215	6.8	1.3	0.0	chr7	100912614	100912760	(58433213)	+	AluSg	SINE/Alu	2	150	(160)	3707631
6615	9.0	3.0	5.5	chr7	101091763	101093354	(58252619)	+	SVA_C	Retroposon/SVA	10	1384	(0)	3707974
2449	8.8	0.3	0.0	chr7	101107985	101108290	(58237683)	+	AluSz	SINE/Alu	1	307	(5)	3708008
17	11.2	0.0	0.0	chr7	101108374	101108402	(58237571)	+	(CACA)n	Simple_repeat	1	29	(0)	3708009
197	32.0	7.2	2.8	chr7	101244545	101244650	(58101323)	+	MIRb	SINE/MIR	155	265	(3)	3708308
805	15.7	0.8	1.5	chr7	101285098	101285267	(58060706)	+	FLAM_C	SINE/Alu	1	143	(0)	3708424
1834	7.8	10.2	0.8	chr7	101285603	101285886	(58060087)	C	AluSx	SINE/Alu	(0)	312	1	3708425
1057	7.5	1.5	0.0	chr7	101542267	101542400	(57803573)	C	AluSz	SINE/Alu	(176)	136	1	3709084
327	32.9	10.2	2.6	chr7	101542407	101542559	(57803414)	C	MIRb	SINE/MIR	(69)	199	34	3709085
1964	10.3	0.0	0.0	chr7	101990414	101990676	(57355297)	C	AluSx1	SINE/Alu	(49)	263	1	3710076
12	8.4	0.0	6.9	chr7	102363835	102363863	(56982110)	+	(TGCG)n	Simple_repeat	1	29	(0)	3710829
25043	4.7	0.4	0.6	chr7	102780678	102786841	(56559132)	+	L1PA4	LINE/L1	3	6155	(0)	3711738
1881	13.2	0.7	0.0	chr7	103465471	103465735	(55880238)	C	AluSx1	SINE/Alu	(6)	306	40	3712781
228	19.2	1.9	0.0	chr7	103465738	103465789	(55880184)	+	Arthur1	DNA/hAT-Tip100	843	895	(3052)	3712782
562	19.4	4.0	9.6	chr7	103465792	103465979	(55879994)	+	Arthur1	DNA/hAT-Tip100	3769	3945	(2)	3712783
624	26.1	6.2	3.7	chr7	103466053	103466239	(55879734)	C	MamRep1527	LTR	(772)	197	6	3712784
12	21.6	0.0	8.8	chr7	105013729	105013785	(54332188)	+	G-rich	Low_complexity	1	57	(0)	3715004
19	4.5	0.0	0.0	chr7	105387504	105387526	(53958447)	+	(T)n	Simple_repeat	1	23	(0)	3715692
12	23.8	1.8	5.4	chr7	105387935	105387989	(53957984)	+	(CCCGCG)n	Simple_repeat	1	56	(0)	3715693
14	20.2	4.3	2.0	chr7	105388347	105388393	(53957580)	+	(CGCC)n	Simple_repeat	1	49	(0)	3715694
433	29.4	16.0	5.6	chr7	105885007	105885474	(53460499)	+	LTR104_Mam	LTR/Gypsy	588	1113	(396)	3716746
349	27.9	6.6	8.1	chr7	106424429	106424689	(52921284)	C	LTR88c	LTR/Gypsy?	(564)	298	42	3717566
22120	8.4	2.5	0.3	chr7	106554534	106560578	(52785395)	C	L1PA6	LINE/L1	(9)	6145	5	3717744
22320	7.2	1.5	0.8	chr7	106671762	106675311	(52670662)	+	L1PA6	LINE/L1	4	3567	(2579)	3717913
287	28.8	4.8	0.0	chr7	106709318	106709397	(52636576)	C	L2b	LINE/L2	(4)	3422	3303	3717953
23527	7.1	0.1	0.2	chr7	106709408	106715579	(52630394)	+	L1PA6	LINE/L1	177	6327	(0)	3717954
22712	7.6	0.5	0.3	chr7	106918809	106924960	(52421013)	+	L1PA6	LINE/L1	5	6154	(0)	3718267
23444	6.8	1.0	0.2	chr7	107093513	107099628	(52246345)	C	L1PA5	LINE/L1	(1)	6153	8	3718598
1666	22.8	2.4	9.2	chr7	107427461	107427571	(51918402)	+	MLT1C	LTR/ERVL-MaLR	1	106	(361)	3719082
4157	14.0	6.7	0.1	chr7	107427572	107428287	(51917686)	C	LTR27C	LTR/ERV1	(0)	767	2	3719083
10100	3.9	0.2	10.6	chr7	107847519	107849053	(51496920)	+	SVA_C	Retroposon/SVA	1	1376	(8)	3719704
12337	9.6	0.8	1.2	chr7	108215515	108218396	(51127577)	C	L1P3	LINE/L1	(3603)	2858	1	3720239
18916	7.8	0.6	0.6	chr7	108218397	108221876	(51124097)	+	L1PB1	LINE/L1	2675	6150	(1)	3720241
24294	6.2	0.4	0.6	chr7	108387570	108393732	(50952241)	C	L1PA5	LINE/L1	(5)	6149	1	3720463
11098	12.3	2.4	0.9	chr7	110119435	110121106	(49224867)	+	L1PA3	LINE/L1	30	1727	(4734)	3722622
24257	7.0	1.6	0.1	chr7	110655136	110661233	(48684740)	C	L1PA4	LINE/L1	(2)	6153	3	3723311
227	33.6	12.9	5.2	chr7	112025539	112026097	(47319876)	+	L2c	LINE/L2	2748	3367	(20)	3725176
2200	11.4	1.5	3.2	chr7	112026133	112026477	(47319496)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	3725177
262	37.7	3.8	1.3	chr7	112582212	112582364	(46763609)	C	MamTip2	DNA/hAT-Tip100	(148)	157	1	3726035
1458	24.1	6.2	4.2	chr7	115352469	115352962	(43993011)	+	MLT1D	LTR/ERVL-MaLR	1	504	(1)	3729609
16092	7.3	1.4	0.2	chr7	116047048	116051301	(43294672)	+	L1PA5	LINE/L1	4	6146	(8)	3730528
15	21.1	1.9	3.7	chr7	116210745	116210797	(43135176)	+	(GCGCGCG)n	Simple_repeat	1	54	(0)	3730740
14	22.7	4.5	4.3	chr7	116672312	116672378	(42673595)	+	(GGCG)n	Simple_repeat	1	70	(0)	3731400
16	22.5	4.7	5.6	chr7	116672439	116672524	(42673449)	+	(GAGCG)n	Simple_repeat	1	90	(0)	3731401
7785	15.4	6.9	2.0	chr7	116742932	116744865	(42601108)	+	L1PA7	LINE/L1	3	2013	(4356)	3731489
8297	18.8	2.1	2.8	chr7	119636373	119639126	(39706847)	C	L1MA8	LINE/L1	(46)	6245	3431	3735387
16	30.9	1.4	1.4	chr7	121396138	121396206	(37949767)	+	(CCGC)n	Simple_repeat	1	70	(0)	3737605
12	25.9	0.0	2.3	chr7	123748458	123748500	(35597473)	+	G-rich	Low_complexity	1	43	(0)	3740905
22781	9.7	1.5	1.8	chr7	123851248	123857641	(35488332)	C	L1PA7	LINE/L1	(3)	6466	5	3741073
531	26.7	21.2	6.0	chr7	127801443	127801777	(31544196)	+	L2a	LINE/L2	1503	1902	(1517)	3746252
526	18.6	0.8	10.6	chr7	127801778	127801850	(31544123)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	2652	3746253
512	27.2	6.4	6.4	chr7	128120232	128120498	(31225475)	C	L2a	LINE/L2	(128)	3298	3032	3746638
287	32.5	1.6	1.6	chr7	128120728	128120849	(31225124)	C	LTR104_Mam	LTR/Gypsy	(1366)	143	22	3746634
1751	20.2	11.1	2.1	chr7	128288561	128288984	(31056989)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	3746963
10533	4.8	0.9	5.7	chr7	128462839	128464284	(30881689)	+	SVA_B	Retroposon/SVA	8	1383	(0)	3747285
855	25.3	5.8	2.0	chr7	129624954	129625389	(29720584)	C	MLT1C	LTR/ERVL-MaLR	(0)	505	1	3749552
2161	10.1	1.0	0.0	chr7	131573498	131573795	(27772178)	+	AluSx	SINE/Alu	1	301	(11)	3753051
1683	20.8	1.7	7.8	chr7	131573796	131574052	(27771921)	+	MLT1C	LTR/ERVL-MaLR	183	413	(54)	3753050
1765	17.0	0.0	1.6	chr7	131574056	131574372	(27771601)	C	AluJo	SINE/Alu	(0)	312	1	3753052
2757	14.2	17.0	0.2	chr7	131854500	131854993	(27490980)	C	LTR27B	LTR/ERV1	(0)	594	1	3753573
318	29.9	2.1	8.1	chr7	132364768	132364916	(26981057)	+	MIRc	SINE/MIR	31	170	(98)	3754296
613	32.0	4.9	2.5	chr7	133961695	133961840	(25384133)	C	MIRb	SINE/MIR	(102)	166	17	3756738
341	31.7	17.0	2.4	chr7	133961840	133962049	(25383924)	C	MIR	SINE/MIR	(0)	262	16	3756741
301	27.0	4.9	6.5	chr7	133962061	133962218	(25383755)	C	MIR3	SINE/MIR	(110)	152	1	3756742
193	32.7	1.8	12.0	chr7	134316255	134316445	(25029528)	+	MIRc	SINE/MIR	20	190	(78)	3757279
402	21.8	11.2	13.0	chr7	134710510	134710593	(24635380)	C	L1ME4a	LINE/L1	(230)	5894	5808	3757897
558	27.8	9.3	3.7	chr7	134710897	134711139	(24634834)	+	MIRb	SINE/MIR	3	260	(8)	3757899
3531	14.7	0.5	3.5	chr7	134946987	134947284	(24398689)	C	L1MB2	LINE/L1	(344)	5827	5529	3758278
195	6.7	3.2	0.0	chr7	134947290	134947319	(24398654)	C	MIR	SINE/MIR	(118)	144	114	3758280
256	31.5	2.4	4.1	chr7	135211094	135211262	(24134711)	+	MIR3	SINE/MIR	1	166	(42)	3758572
14	26.9	3.0	2.9	chr7	135211522	135211587	(24134386)	+	G-rich	Low_complexity	1	68	(0)	3758573
1927	21.9	4.3	1.5	chr7	135661509	135661981	(23683992)	+	LTR31	LTR/ERV1	115	601	(18)	3759373
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
1689	22.7	6.3	0.4	chr7	136213357	136213807	(23132166)	C	L1ME2	LINE/L1	(306)	5858	5380	3760294
19	19.4	3.8	0.0	chr7	136213967	136214019	(23131954)	+	(TATATAA)n	Simple_repeat	1	55	(0)	3760297
50	0.0	0.0	0.0	chr7	138222059	138222103	(21123870)	+	(GAGGAGA)n	Simple_repeat	1	45	(0)	3763148
828	13.9	14.2	0.0	chr7	138222104	138222188	(21123785)	C	MER57-int	LTR/ERV1	(7705)	111	2	3763143
2085	13.7	26.0	3.5	chr7	138222189	138222674	(21123299)	C	MER51A	LTR/ERV1	(0)	634	1	3763143
5709	4.0	1.8	0.3	chr7	138378312	138379008	(20966965)	C	SVA_B	Retroposon/SVA	(0)	1383	676	3763479
205	32.6	8.7	3.3	chr7	138379075	138379344	(20966629)	+	L2	LINE/L2	968	1253	(2166)	3763480
16	20.5	0.0	0.0	chr7	138460183	138460221	(20885752)	+	G-rich	Low_complexity	1	39	(0)	3763674
14	16.1	0.0	0.0	chr7	138460459	138460486	(20885487)	+	GA-rich	Low_complexity	1	28	(0)	3763675
12	19.6	7.0	5.3	chr7	138460756	138460826	(20885147)	+	(CTGC)n	Simple_repeat	1	76	(0)	3763676
216	29.3	0.0	0.0	chr7	139109883	139109940	(20236033)	C	MIRb	SINE/MIR	(79)	189	132	3764943
2140	13.6	0.0	2.5	chr7	139356027	139356343	(19989630)	+	AluJb	SINE/Alu	3	311	(1)	3765417
483	24.4	10.4	5.9	chr7	139356344	139356488	(19989485)	+	L1MEd	LINE/L1	1499	1641	(4584)	3765414
856	11.6	0.0	0.0	chr7	139356500	139356611	(19989362)	+	AluSz	SINE/Alu	1	112	(200)	3765418
859	22.1	2.5	5.8	chr7	139356626	139356832	(19989141)	C	MER58A	DNA/hAT-Charlie	(24)	200	1	3765419
184	36.0	8.7	7.5	chr7	139725098	139725325	(19620648)	C	L2c	LINE/L2	(51)	3336	3106	3766091
2023	14.1	5.9	1.2	chr7	140918215	140918537	(18427436)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3768428
19	24.8	2.1	6.1	chr7	140924604	140924699	(18421274)	+	(CGGCGC)n	Simple_repeat	1	98	(0)	3768435
27792	2.8	0.5	0.1	chr7	141032607	141038609	(18307364)	+	L1PA2	LINE/L1	127	6155	(0)	3768656
256	23.1	10.0	0.0	chr7	141551677	141551784	(17794189)	+	MIR3	SINE/MIR	27	146	(62)	3769473
420	30.6	0.0	4.0	chr7	141738729	141738854	(17607119)	C	L2a	LINE/L2	(16)	3410	3290	3769758
462	16.4	1.1	0.0	chr7	142209781	142209869	(17136104)	+	MER33	DNA/hAT-Charlie	6	111	(98)	3770373
15588	10.2	2.0	0.8	chr7	142209916	142214726	(17131247)	+	L1PA7	LINE/L1	8	4881	(1580)	3770374
13	21.0	6.1	4.3	chr7	142352799	142352864	(16993109)	+	(CTCCTG)n	Simple_repeat	1	70	(0)	3770546
50	0.0	0.0	0.0	chr7	142352944	142352986	(16992987)	+	(TG)n	Simple_repeat	1	43	(0)	3770547
15	9.7	11.8	0.0	chr7	143029459	143029492	(16316481)	+	(CT)n	Simple_repeat	1	38	(0)	3771305
900	12.5	0.0	1.6	chr7	143510643	143510770	(15835203)	C	AluSq	SINE/Alu	(30)	283	158	3772039
8314	17.3	3.7	0.8	chr7	144699520	144701284	(14644689)	+	L1MA7	LINE/L1	3673	5488	(803)	3773555
6649	9.8	15.2	3.4	chr7	146787264	146788363	(12557610)	C	LTR12D	LTR/ERV1	(0)	1254	1	3776383
28000	2.0	0.1	0.1	chr7	146905785	146911817	(12434156)	+	L1PA2	LINE/L1	124	6153	(2)	3776556
22375	11.6	3.8	6.0	chr7	148674560	148677019	(10668954)	+	L1MA3	LINE/L1	17	2432	(5133)	3779212
18	24.7	1.5	4.3	chr7	148699038	148699105	(10646868)	+	(CGG)n	Simple_repeat	1	69	(0)	3779245
27	3.4	0.0	0.0	chr7	148983132	148983161	(10362812)	+	(TTCA)n	Simple_repeat	1	30	(0)	3779764
26	2.6	4.9	2.3	chr7	149091051	149091091	(10254882)	+	(CAGGGA)n	Simple_repeat	1	43	(0)	3780003
5493	3.2	0.2	0.0	chr7	149332562	149333192	(10012781)	C	SVA_B	Retroposon/SVA	(0)	1383	752	3780528
1157	17.1	3.3	10.2	chr7	149333193	149333672	(10012301)	+	L1MB3	LINE/L1	1465	1819	(5024)	3780527
26084	6.7	0.5	0.1	chr7	149573820	149579948	(9766025)	C	L1PA5	LINE/L1	(5)	6149	1	3780873
303	32.9	0.5	0.0	chr7	149692449	149692597	(9653376)	+	L1MEg	LINE/L1	1483	1638	(869)	3781041
316	5.4	0.0	0.0	chr7	149692910	149692946	(9653027)	C	AluYk11	SINE/Alu	(274)	37	1	3781042
420	18.2	0.0	0.0	chr7	150035593	150035669	(9310304)	C	HERVE-int	LTR/ERV1	(4528)	3319	3243	3781488
15	16.3	1.8	8.6	chr7	150341765	150341821	(9004152)	+	(CCCT)n	Simple_repeat	1	58	(0)	3781898
29	10.1	3.6	1.8	chr7	151341712	151341766	(8004207)	+	(GCG)n	Simple_repeat	1	57	(0)	3783281
28	2.8	0.0	5.0	chr7	151341988	151342027	(8003946)	+	(GGGCCG)n	Simple_repeat	1	40	(0)	3783282
19	14.8	5.4	3.4	chr7	151519191	151519246	(7826727)	+	(CCCG)n	Simple_repeat	1	59	(0)	3783576
18	29.5	0.0	5.5	chr7	151519551	151519641	(7826332)	+	(GCGGCG)n	Simple_repeat	1	91	(0)	3783577
2755	7.2	0.6	3.7	chr7	151588659	151588872	(7757101)	+	THE1B	LTR/ERVL-MaLR	162	364	(0)	3783709
841	25.8	17.9	6.2	chr7	151588944	151589636	(7756337)	+	LTR50	LTR/ERVL	1	792	(3)	3783711
15	23.4	3.9	5.0	chr7	151631866	151631942	(7714031)	+	(CCCCGGA)n	Simple_repeat	1	80	(0)	3783798
13	18.8	0.0	5.0	chr7	151632021	151632060	(7713913)	+	(GGCCG)n	Simple_repeat	1	40	(0)	3783799
16	13.1	3.4	8.2	chr7	151632244	151632302	(7713671)	+	G-rich	Low_complexity	1	61	(0)	3783800
18	23.4	1.4	5.5	chr7	151632301	151632372	(7713601)	+	(CGC)n	Simple_repeat	1	73	(0)	3783801
284	28.0	12.8	1.3	chr7	151768871	151769029	(7576944)	+	MER110A	LTR/ERV1	251	430	(38)	3784016
1674	24.5	5.5	0.5	chr7	151769267	151769701	(7576272)	+	MLT1C	LTR/ERVL-MaLR	6	463	(4)	3784017
309	33.7	8.8	5.5	chr7	151833013	151833314	(7512659)	C	L2b	LINE/L2	(29)	3358	3025	3784098
465	25.0	5.4	0.5	chr7	151940288	151940502	(7405471)	+	L1M5	LINE/L1	5209	5432	(762)	3784285
2946	11.1	19.2	1.2	chr7	151940914	151941431	(7404542)	C	MER51A	LTR/ERV1	(0)	634	1	3784288
29	0.0	0.0	0.0	chr7	152436749	152436775	(6909198)	+	(CTCCGG)n	Simple_repeat	1	27	(0)	3785122
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
1988	16.4	0.3	0.3	chr7	152488066	152488377	(6857596)	+	AluJr	SINE/Alu	1	312	(0)	3785253
593	29.7	8.9	4.1	chr7	152759225	152759543	(6586430)	C	L2a	LINE/L2	(0)	3426	3091	3785944
13	19.5	0.0	2.7	chr7	152759662	152759698	(6586275)	+	G-rich	Low_complexity	1	37	(0)	3785945
12	23.8	2.2	2.1	chr7	152759939	152759984	(6585989)	+	(CGGCCC)n	Simple_repeat	1	47	(0)	3785946
426	16.9	0.0	0.0	chr7	154058658	154058734	(5287239)	+	HERVE-int	LTR/ERV1	3243	3319	(4528)	3787783
263	28.7	2.0	3.9	chr7	154058749	154058951	(5287022)	C	SATR1	Satellite	(84)	339	141	3787784
452	15.6	0.0	0.0	chr7	154060507	154060583	(5285390)	+	HERVE-int	LTR/ERV1	3243	3319	(4528)	3787785
3910	11.9	0.5	0.5	chr7	154060974	154061571	(5284402)	+	HERVE-int	LTR/ERV1	3249	3846	(3967)	3787785
449	15.6	0.0	0.0	chr7	154062196	154062272	(5283701)	+	HERVE_a-int	LTR/ERV1	3243	3319	(4528)	3787786
1046	22.3	11.6	1.7	chr7	155211522	155211877	(4134096)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3789356
15	23.8	3.6	1.7	chr7	155211919	155211974	(4133999)	+	(GCAGG)n	Simple_repeat	1	58	(0)	3789357
35	0.0	0.0	0.0	chr7	155467834	155467865	(3878108)	+	(CCAGCC)n	Simple_repeat	1	32	(0)	3789671
2018	20.9	2.3	0.3	chr7	155566717	155567401	(3778572)	+	L1M2	LINE/L1	4945	5683	(608)	3789804
3936	10.7	7.7	0.1	chr7	155590743	155591362	(3754611)	C	LTR1C	LTR/ERV1	(0)	747	1	3789844
348	26.3	7.1	7.6	chr7	155591363	155591543	(3754430)	+	MER89	LTR/ERV1	326	505	(54)	3789843
620	23.9	1.4	0.0	chr7	155591542	155591679	(3754294)	C	MER89	LTR/ERV1	(273)	286	147	3789845
581	15.7	2.7	0.9	chr7	155595092	155595200	(3750773)	+	MLT1A0	LTR/ERVL-MaLR	10	120	(245)	3789852
394	28.1	9.4	4.1	chr7	155595217	155595387	(3750586)	+	MLT1A0	LTR/ERVL-MaLR	210	390	(0)	3789852
291	34.0	11.6	0.5	chr7	155907246	155907437	(3438536)	C	MIRb	SINE/MIR	(7)	261	46	3790231
424	32.4	6.5	6.3	chr7	156402000	156402441	(2943532)	C	LTR81A	LTR/Gypsy	(314)	875	433	3790855
538	27.1	10.4	1.7	chr7	156402637	156402872	(2943101)	C	LTR81A	LTR/Gypsy	(1006)	344	86	3790855
13	15.2	0.0	7.1	chr7	156909353	156909394	(2436579)	+	(TTATTTT)n	Simple_repeat	1	42	(0)	3791542
2280	8.8	0.7	1.0	chr7	157335656	157335952	(2010021)	C	AluSp	SINE/Alu	(15)	298	3	3792327
753	23.7	11.5	14.2	chr7	157472409	157472831	(1873142)	C	L1M4b	LINE/L1	(6457)	410	1	3792504
2125	25.6	3.5	1.2	chr7	157472836	157473484	(1872489)	C	L1MEf	LINE/L1	(4420)	2220	1557	3792505
1404	24.6	3.1	1.2	chr7	157564408	157565134	(1780839)	+	L1MB3	LINE/L1	5125	5976	(207)	3792589
204	36.8	0.6	4.9	chr7	157710164	157710326	(1635647)	C	L3	LINE/CR1	(204)	3895	3740	3792689
1507	22.9	4.9	0.8	chr7	157863616	157863989	(1481984)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	3792802
286	26.5	5.8	1.0	chr7	158122643	158122741	(1223232)	C	MIR	SINE/MIR	(85)	177	74	3793010
434	25.4	6.7	10.3	chr7	158570283	158570563	(775410)	+	LTR62	LTR/ERVL	20	289	(420)	3793383
1165	27.2	0.9	1.5	chr7	158570578	158570916	(775057)	+	LTR62	LTR/ERVL	368	704	(5)	3793383
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
1622	16.0	3.0	1.7	chr7	158734507	158734800	(611173)	+	AluJo	SINE/Alu	1	298	(14)	3793622
2607	14.6	3.5	0.0	chr7	158836414	158836823	(509150)	+	MSTB	LTR/ERVL-MaLR	2	426	(0)	3793768
2850	21.3	7.1	0.8	chr7	159015974	159016683	(329290)	+	LTR39	LTR/ERV1	1	758	(25)	3794007
12	18.3	4.3	4.1	chr7	159065154	159065200	(280773)	+	(TCTGAGTG)n	Simple_repeat	1	49	(0)	3794046
15	9.7	2.7	5.3	chr7	159065258	159065294	(280679)	+	(TCCCC)n	Simple_repeat	1	38	(0)	3794047
269	29.1	8.2	1.6	chr7	159065404	159065585	(280388)	+	LTR33	LTR/ERVL	321	515	(0)	3794048
15	20.4	0.0	2.4	chr7	159144586	159144626	(201347)	+	(CCCGCT)n	Simple_repeat	1	41	(0)	3794136
18	4.0	0.0	3.6	chr8	544659	544686	(144593950)	+	(GGC)n	Simple_repeat	1	28	(0)	3794932
374	29.4	8.8	4.3	chr8	900435	900619	(144238017)	C	L1MC4	LINE/L1	(646)	7396	7203	3795288
26142	3.9	0.3	0.1	chr8	1167885	1174028	(143964608)	C	L1PA3	LINE/L1	(0)	6155	4	3795505
433	22.1	23.2	0.0	chr8	6251034	6251207	(138887429)	C	MER45C	DNA/hAT-Tip100	(23)	930	716	3801727
368	28.1	11.4	1.1	chr8	6251278	6251457	(138887179)	C	MER45C	DNA/hAT-Tip100	(679)	274	74	3801727
188	16.1	1.8	8.2	chr8	6878246	6878306	(138260330)	+	Tigger19b	DNA/TcMar-Tigger	198	254	(296)	3802723
1835	19.7	9.0	0.9	chr8	7064857	7066096	(138072540)	C	SATR1	Satellite	(54)	1340	1	3802943
1827	18.1	9.2	3.9	chr8	7073210	7075818	(138062818)	C	SATR1	Satellite	(66)	2746	1	3802949
2354	11.2	0.0	0.0	chr8	8897145	8897448	(136241188)	+	AluSg	SINE/Alu	1	304	(6)	3805532
477	16.5	1.2	0.0	chr8	8897472	8897550	(136241086)	C	AluJo	SINE/Alu	(179)	133	54	3805533
301	31.3	11.3	0.7	chr8	8897593	8897727	(136240909)	+	MER115	DNA/hAT-Tip100	69	219	(474)	3805534
745	24.0	4.1	6.5	chr8	9851141	9851312	(135287324)	+	L1ME3G	LINE/L1	29	199	(725)	3807136
2048	14.4	13.0	0.8	chr8	9851313	9851684	(135286952)	C	MSTA	LTR/ERVL-MaLR	(0)	428	5	3807137
1819	23.2	9.5	4.5	chr8	11913730	11915293	(133223343)	+	SATR1	Satellite	1	1641	(0)	3810388
1974	17.9	1.2	1.6	chr8	11915705	11919895	(133218741)	+	SATR1	Satellite	1	1889	(1)	3810389
1321	24.7	9.4	6.2	chr8	12288946	12289823	(132848813)	+	SATR1	Satellite	1	906	(45)	3810841
1870	22.4	7.9	5.0	chr8	12713006	12714085	(132424551)	+	SATR1	Satellite	1	1111	(0)	3811456
1500	18.9	7.9	0.0	chr8	12714140	12714441	(132424195)	C	SATR1	Satellite	(46)	377	50	3811457
1926	20.8	10.0	1.1	chr8	12714952	12716102	(132422534)	+	SATR1	Satellite	1	1252	(39)	3811459
18	7.7	0.0	0.0	chr8	13385244	13385271	(131753365)	+	(AAC)n	Simple_repeat	1	28	(0)	3812598
9906	5.4	1.0	5.9	chr8	15445317	15446765	(129691871)	C	SVA_B	Retroposon/SVA	(0)	1383	7	3815377
533	30.8	7.1	4.2	chr8	15886926	15887210	(129251426)	+	L1MCc	LINE/L1	214	507	(5916)	3815980
2323	8.4	0.0	0.0	chr8	16120096	16120379	(129018257)	+	AluSc8	SINE/Alu	1	284	(27)	3816322
23	0.0	0.0	0.0	chr8	16120617	16120641	(129017995)	+	(A)n	Simple_repeat	1	25	(0)	3816323
890	26.0	1.7	1.3	chr8	18887845	18888078	(126250558)	C	MIR	SINE/MIR	(21)	241	7	3820277
226	30.1	2.4	2.1	chr8	18888269	18888367	(126250269)	+	MIRc	SINE/MIR	64	163	(45)	3820278
585	27.0	11.5	4.0	chr8	18888368	18888591	(126250045)	+	MIR	SINE/MIR	2	244	(18)	3820279
1708	17.4	0.4	1.1	chr8	19792487	19792767	(125345869)	+	AluJb	SINE/Alu	3	281	(31)	3821791
17	16.5	7.8	7.2	chr8	21037367	21037469	(124101167)	+	GA-rich	Low_complexity	1	111	(0)	3823806
1976	17.3	8.2	3.4	chr8	21037486	21037892	(124100744)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3823807
1791	15.8	0.3	3.5	chr8	22088716	22089025	(123049611)	+	AluJr	SINE/Alu	13	312	(0)	3825567
29	31.5	1.6	5.8	chr8	22165128	22165313	(122973323)	+	G-rich	Low_complexity	1	189	(0)	3825674
252	31.2	0.3	2.3	chr8	22583371	22583468	(122555168)	+	MIR3	SINE/MIR	68	165	(103)	3826499
13	26.2	1.7	3.4	chr8	22589482	22589539	(122549097)	+	(CCTCCC)n	Simple_repeat	1	59	(0)	3826512
795	24.6	1.6	2.0	chr8	24248904	24249098	(120889538)	+	MER20	DNA/hAT-Charlie	1	194	(25)	3829183
2283	10.5	0.0	7.7	chr8	25049216	25049540	(120089096)	+	AluSx	SINE/Alu	1	300	(12)	3830400
181	36.3	8.6	4.3	chr8	25049930	25050185	(120088451)	C	L2c	LINE/L2	(4)	3383	3116	3830401
17	24.1	3.0	2.9	chr8	25458125	25458191	(119680445)	+	(CCCG)n	Simple_repeat	1	69	(0)	3831138
525	20.2	3.8	4.9	chr8	26084307	26084469	(119054167)	+	L1MD3	LINE/L1	7847	7967	(28)	3832038
53	22.1	1.4	7.4	chr8	26449316	26449527	(118689109)	+	G-rich	Low_complexity	1	215	(0)	3832761
389	28.8	4.2	9.8	chr8	27344357	27344560	(117794076)	+	MIRb	SINE/MIR	69	260	(8)	3834220
26534	5.6	0.1	0.1	chr8	31231265	31237418	(113901218)	C	L1PA4	LINE/L1	(0)	6155	2	3841268
2151	11.2	0.0	0.0	chr8	33567477	33567762	(111570874)	C	AluSz6	SINE/Alu	(26)	286	1	3844775
10933	17.1	7.1	8.0	chr8	34890714	34893377	(110245259)	+	HUERS-P3b-int	LTR/ERV1	4	2642	(4776)	3846787
2850	10.7	3.5	0.0	chr8	37646278	37646690	(107491946)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3850702
1785	12.6	5.8	0.0	chr8	37976137	37976413	(107162223)	C	AluSx1	SINE/Alu	(17)	295	2	3851342
1382	15.0	16.2	0.4	chr8	38602390	38602643	(106535993)	C	AluJr	SINE/Alu	(10)	302	1	3852611
1980	19.1	4.7	2.8	chr8	38602831	38603288	(106535348)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	3852612
688	30.1	11.3	0.8	chr8	38929462	38929699	(106208937)	+	MIRb	SINE/MIR	3	268	(0)	3853220
813	13.8	0.0	1.6	chr8	39107269	39107391	(106031245)	+	FLAM_A	SINE/Alu	9	129	(13)	3853514
1031	24.0	0.9	0.0	chr8	40984383	40984590	(104154046)	+	MER58A	DNA/hAT-Charlie	10	219	(5)	3856223
11	27.2	2.0	2.0	chr8	40984726	40984775	(104153861)	+	(CCAGCC)n	Simple_repeat	1	51	(0)	3856224
1364	14.4	0.4	10.6	chr8	41528480	41528771	(103609865)	+	AluJr	SINE/Alu	35	296	(16)	3857156
13	22.0	4.1	2.0	chr8	41654455	41654503	(103484133)	+	(CAGCCTG)n	Simple_repeat	1	51	(0)	3857389
363	34.2	0.7	7.9	chr8	41706310	41706428	(103432208)	+	MIR3	SINE/MIR	44	159	(49)	3857459
445	18.5	8.0	2.2	chr8	41829390	41829524	(103309112)	C	MIR	SINE/MIR	(107)	161	23	3857669
15	7.5	3.3	3.2	chr8	42541301	42541330	(102597306)	+	(CCG)n	Simple_repeat	1	31	(0)	3858982
18	16.4	5.2	3.3	chr8	43056172	43056229	(102082407)	+	(CGCAGCC)n	Simple_repeat	1	61	(0)	3860029
13	18.5	7.0	0.0	chr8	43056407	43056449	(102082187)	+	(CAGCCC)n	Simple_repeat	1	46	(0)	3860030
6250	16.1	2.6	0.9	chr8	43259521	43260602	(101878034)	C	MSTA-int	LTR/ERVL-MaLR	(7)	1624	524	3860351
27036	3.5	0.2	0.0	chr8	43307288	43313276	(101825360)	C	L1PA2	LINE/L1	(3)	6152	157	3860400
342	26.0	0.0	0.0	chr8	43313277	43313349	(101825287)	C	MER58A	DNA/hAT-Charlie	(150)	74	2	3860401
5288	20.8	3.1	4.7	chr8	43430616	43432241	(101706395)	+	HUERS-P3-int	LTR/ERV1	97	1823	(5595)	3860502
413	29.0	4.6	0.0	chr8	47129540	47129684	(98008952)	+	Zaphod2	DNA/hAT-Tip100	155	306	(3218)	3861497
3531	13.5	0.8	1.9	chr8	47129746	47130275	(98008361)	+	MER1A	DNA/hAT-Charlie	1	524	(5)	3861498
10893	8.3	2.4	0.9	chr8	47152774	47154233	(97984403)	+	L1PA6	LINE/L1	4	1486	(4698)	3861532
12	20.7	2.0	5.9	chr8	47188672	47188721	(97949915)	+	(CACCCAG)n	Simple_repeat	1	51	(0)	3861571
11	21.3	4.4	2.1	chr8	47188861	47188905	(97949731)	+	(CCGCCA)n	Simple_repeat	1	47	(0)	3861572
15	25.0	3.1	3.0	chr8	47260886	47260950	(97877686)	+	(GGCGC)n	Simple_repeat	1	67	(0)	3861679
2149	13.8	0.3	1.0	chr8	47410169	47410480	(97728156)	C	AluSx1	SINE/Alu	(2)	310	1	3861906
2305	10.5	0.0	0.0	chr8	47741632	47741927	(97396709)	C	AluSx	SINE/Alu	(16)	296	1	3862336
1405	27.1	11.1	3.9	chr8	48131334	48132461	(97006175)	C	L1ME3E	LINE/L1	(89)	6153	4950	3863000
11465	15.4	2.3	2.7	chr8	48225650	48227968	(96910668)	+	HUERS-P3b-int	LTR/ERV1	273	2642	(4776)	3863119
28111	2.5	0.1	0.0	chr8	48793906	48799930	(96338706)	C	L1PA2	LINE/L1	(0)	6155	124	3863694
1998	18.9	4.1	12.6	chr8	48799981	48800542	(96338094)	C	L1MC3	LINE/L1	(13)	7772	7268	3863695
10211	5.5	1.4	6.9	chr8	49040894	49042358	(96096278)	C	SVA_B	Retroposon/SVA	(0)	1383	1	3863972
450	24.8	5.6	16.5	chr8	49160321	49160581	(95978055)	C	LTR16A1	LTR/ERVL	(219)	237	7	3864107
1116	28.9	8.4	2.2	chr8	52516687	52517276	(92621360)	C	HAL1	LINE/L1	(629)	1878	1249	3868244
281	35.3	12.3	4.2	chr8	53327861	53328144	(91810492)	C	HAL1ME	LINE/L1	(1622)	885	576	3869368
27779	3.0	0.2	0.0	chr8	53609644	53615529	(91523107)	+	L1PA3	LINE/L1	262	6155	(0)	3869709
2477	12.9	0.0	0.3	chr8	53931601	53931951	(91206685)	+	L1PA7	LINE/L1	2	351	(6110)	3870165
1971	5.8	0.0	0.0	chr8	53931947	53932188	(91206448)	C	L1P2	LINE/L1	(4209)	1975	1734	3870166
23605	8.5	1.3	2.0	chr8	53932185	53937061	(91201575)	+	L1PA7	LINE/L1	358	5272	(1189)	3870165
12	13.7	2.0	10.0	chr8	54021999	54022047	(91116589)	+	(CGGCC)n	Simple_repeat	1	50	(0)	3870335
10107	4.0	2.4	8.6	chr8	54084968	54086444	(91052192)	+	SVA_B	Retroposon/SVA	1	1383	(0)	3870467
3493	8.2	2.5	5.5	chr8	57003500	57004027	(88134609)	+	MER9a3	LTR/ERVK	1	512	(0)	3874720
9899	14.6	1.7	1.5	chr8	57004028	57005355	(88133281)	C	L1PA16	LINE/L1	(1235)	5036	3703	3874718
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
2126	13.7	0.3	0.3	chr8	58369848	58370146	(86768490)	+	AluSx	SINE/Alu	1	299	(13)	3876486
26923	3.6	0.1	0.0	chr8	58370158	58376173	(86762463)	+	L1PA3	LINE/L1	124	6145	(10)	3876487
15	12.2	0.0	0.0	chr8	58659589	58659615	(86479021)	+	(GCT)n	Simple_repeat	1	27	(0)	3876891
12558	10.4	1.4	1.3	chr8	60447770	60451735	(84686901)	+	L1PA7	LINE/L1	8	3983	(2478)	3879155
12093	11.9	1.1	2.2	chr8	62238912	62242689	(82895947)	C	L1PA7	LINE/L1	(1347)	5114	1	3881643
21791	9.6	0.5	4.8	chr8	67538959	67541276	(77597360)	C	L1PA7	LINE/L1	(3978)	2521	233	3889438
1639	17.1	3.2	6.5	chr8	68341423	68341501	(76797135)	+	L1MA7	LINE/L1	5911	5983	(308)	3890580
2070	15.9	7.7	1.0	chr8	68341502	68341900	(76796736)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3890581
1849	15.8	3.2	2.6	chr8	69641464	69641773	(75496863)	+	AluJr	SINE/Alu	1	312	(0)	3892329
921	25.2	7.7	2.2	chr8	70534966	70535285	(74603351)	+	L2	LINE/L2	629	967	(2452)	3894001
2156	20.0	5.9	9.6	chr8	70535304	70535921	(74602715)	+	LTR27B	LTR/ERV1	1	594	(0)	3894002
26	0.0	0.0	0.0	chr8	71362156	71362180	(73776456)	+	(T)n	Simple_repeat	1	25	(0)	3895128
4310	24.1	10.0	1.6	chr8	71576743	71578380	(73560256)	C	L1ME1	LINE/L1	(4533)	1882	61	3895389
491	28.0	8.5	2.3	chr8	71578352	71578728	(73559908)	+	L1MEg	LINE/L1	1835	2228	(4014)	3895385
24875	5.3	0.1	0.0	chr8	71820262	71826403	(73312233)	+	L1PA4	LINE/L1	2	6151	(4)	3895725
16280	8.8	0.1	0.0	chr8	71936556	71939973	(73198663)	C	L1PA3	LINE/L1	(2706)	3440	22	3895849
401	19.6	12.8	2.0	chr8	71939971	71940116	(73198520)	C	L1MCc	LINE/L1	(4589)	2448	2263	3895846
11298	9.4	0.3	0.1	chr8	72398195	72399764	(72738872)	C	THE1B-int	LTR/ERVL-MaLR	(7)	1573	1	3896399
21	18.8	0.0	0.0	chr8	72537121	72537163	(72601473)	+	GA-rich	Low_complexity	1	43	(0)	3896585
29	0.0	3.2	0.0	chr8	72537354	72537384	(72601252)	+	(CCGCCCT)n	Simple_repeat	1	32	(0)	3896586
3064	8.1	12.7	0.2	chr8	73983916	73984362	(71154274)	C	LTR10F	LTR/ERV1	(0)	511	1	3898933
23740	9.2	1.1	0.5	chr8	74156206	74162644	(70975992)	+	L1PA7	LINE/L1	4	6469	(0)	3899289
722	19.6	0.0	0.0	chr8	74428112	74428223	(70710413)	+	AluJr	SINE/Alu	2	113	(199)	3899644
44	2.3	0.0	0.0	chr8	74428228	74428271	(70710365)	+	(AAC)n	Simple_repeat	1	44	(0)	3899645
2045	12.4	4.9	0.3	chr8	74428465	74428633	(70710003)	C	AluSz	SINE/Alu	(7)	305	134	3899646
895	24.4	7.8	4.8	chr8	74458684	74459054	(70679582)	+	MLT1B	LTR/ERVL-MaLR	8	390	(0)	3899691
5538	10.4	18.3	10.1	chr8	74771044	74772182	(70366454)	C	LTR12D	LTR/ERV1	(0)	1254	1	3900093
10882	14.1	2.9	0.9	chr8	78104729	78107031	(67031605)	C	L1P3	LINE/L1	(4155)	2328	10	3904227
17	18.6	0.0	0.0	chr8	80171178	80171215	(64967421)	+	(CTCACA)n	Simple_repeat	1	38	(0)	3907147
27	15.9	1.7	1.7	chr8	80171332	80171405	(64967231)	+	(AGCCCA)n	Simple_repeat	1	74	(0)	3907148
1462	18.1	13.3	2.6	chr8	80405063	80405305	(64733331)	+	L1MD2	LINE/L1	5929	6206	(153)	3907700
16	0.0	0.0	0.0	chr8	80405313	80405330	(64733306)	+	(AT)n	Simple_repeat	1	18	(0)	3907702
29	0.0	0.0	0.0	chr8	80405331	80405355	(64733281)	+	(AG)n	Simple_repeat	1	25	(0)	3907703
1486	16.2	0.4	12.1	chr8	80405357	80405515	(64733121)	C	AluSx	SINE/Alu	(34)	278	136	3907704
557	14.4	12.6	0.0	chr8	80405516	80405605	(64733031)	+	U6	snRNA	1	103	(4)	3907705
1486	16.2	0.4	12.1	chr8	80405606	80405622	(64733014)	C	AluSx	SINE/Alu	(177)	135	136	3907704
2002	12.8	0.3	0.7	chr8	80405623	80405936	(64732700)	C	AluSx3	SINE/Alu	(0)	311	1	3907706
1366	15.9	3.5	11.0	chr8	80505746	80506054	(64632582)	C	AluJo	SINE/Alu	(27)	285	1	3907937
1143	18.8	8.7	6.8	chr8	81315116	81315543	(63823093)	C	LTR56	LTR/ERV1	(0)	445	9	3909103
2250	16.1	10.2	2.0	chr8	82369006	82370508	(62768128)	+	SATR1	Satellite	4976	6826	(0)	3910566
35	17.9	0.0	0.0	chr8	84183611	84183673	(60954963)	+	(T)n	Simple_repeat	1	63	(0)	3912804
27586	2.6	0.2	0.1	chr8	84615571	84621623	(60517013)	C	L1PA3	LINE/L1	(0)	6155	124	3913425
14	15.9	7.1	0.0	chr8	85463829	85463870	(59674766)	+	(CCCCG)n	Simple_repeat	1	45	(0)	3914609
37	0.0	0.0	0.0	chr8	85464147	85464180	(59674456)	+	(CCCCGAT)n	Simple_repeat	1	34	(0)	3914610
9987	3.7	0.4	13.0	chr8	86389157	86390736	(58747900)	C	SVA_B	Retroposon/SVA	(0)	1383	3	3916002
38927	22.7	3.5	4.3	chr8	87051891	87055053	(58083583)	C	HUERS-P3-int	LTR/ERV1	(5876)	3043	29	3916942
270	29.5	6.5	6.5	chr8	90874644	90874857	(54263779)	C	L1ME4b	LINE/L1	(316)	576	363	3921730
25983	3.4	0.2	0.0	chr8	91793552	91799568	(53339068)	+	L1PA3	LINE/L1	124	6150	(5)	3922978
1353	17.6	5.4	8.1	chr8	92012261	92012567	(53126069)	+	AluJb	SINE/Alu	1	298	(14)	3923284
24540	8.0	0.7	0.1	chr8	92216066	92222189	(52916447)	C	L1PA5	LINE/L1	(0)	6469	322	3923605
15281	13.6	1.9	3.3	chr8	93055458	93058921	(52079715)	C	L1PA7	LINE/L1	(13)	3502	8	3924644
24591	6.7	0.8	0.3	chr8	93963828	93969969	(51168667)	C	L1PA6	LINE/L1	(0)	6154	1	3926119
13	28.3	5.4	1.3	chr8	94720070	94720143	(50418493)	+	(GGCGGT)n	Simple_repeat	1	78	(0)	3927428
13	17.9	3.1	0.0	chr8	95224926	95224957	(49913679)	+	(TGG)n	Simple_repeat	1	33	(0)	3928435
15	19.6	0.0	0.0	chr8	96160834	96160868	(48977768)	+	(CCCCG)n	Simple_repeat	1	35	(0)	3929827
26	22.5	3.2	3.1	chr8	96160868	96160960	(48977676)	+	G-rich	Low_complexity	1	96	(0)	3929828
16	22.7	6.2	2.9	chr8	96160988	96161052	(48977584)	+	(CG)n	Simple_repeat	1	69	(0)	3929829
685	23.0	11.3	0.6	chr8	97295438	97295603	(47843033)	+	LTR33	LTR/ERVL	4	189	(326)	3931525
28937	1.3	0.0	0.0	chr8	97295604	97301657	(47836979)	+	L1PA2	LINE/L1	128	6155	(0)	3931526
10212	5.2	0.6	5.8	chr8	98051107	98052515	(47086121)	C	SVA_B	Retroposon/SVA	(0)	1383	48	3932998
27443	2.9	0.1	0.0	chr8	98584098	98590122	(46548514)	C	L1PA3	LINE/L1	(0)	6155	127	3933872
14	14.2	3.2	0.0	chr8	98825451	98825481	(46313155)	+	(GCC)n	Simple_repeat	1	32	(0)	3934227
13	21.3	0.0	0.0	chr8	99012974	99013006	(46125630)	+	(GCCGCA)n	Simple_repeat	1	33	(0)	3934592
22665	9.6	0.8	0.6	chr8	99828435	99831056	(45307580)	C	L1PA7	LINE/L1	(3831)	2630	8	3935738
2335	11.2	0.0	0.3	chr8	99831069	99831371	(45307265)	C	AluSg	SINE/Alu	(8)	302	1	3935740
4472	9.4	1.2	1.9	chr8	100107693	100108373	(45030263)	+	L1PA10	LINE/L1	1727	2402	(3951)	3936191
20174	10.2	2.4	3.0	chr8	100108374	100113794	(45024842)	+	L1PA7	LINE/L1	1	5508	(953)	3936192
250	17.3	1.9	0.0	chr8	100815731	100815782	(44322854)	C	MLT1N2	LTR/ERVL-MaLR	(479)	83	31	3937569
2498	9.6	0.0	0.0	chr8	100815901	100816212	(44322424)	C	AluSx1	SINE/Alu	(0)	312	1	3937570
628	24.6	10.4	0.8	chr8	101166087	101166271	(43972365)	C	MIR	SINE/MIR	(61)	201	5	3938282
197	21.8	0.0	0.0	chr8	101166398	101166452	(43972184)	C	OldhAT1	DNA/hAT-Ac	(2365)	483	429	3938285
268	25.8	8.5	11.2	chr8	101368517	101368686	(43769950)	C	MER5A	DNA/hAT-Charlie	(24)	165	1	3938646
18	15.3	3.6	5.2	chr8	101493394	101493449	(43645187)	+	(CCCT)n	Simple_repeat	1	58	(0)	3938863
309	33.3	6.8	0.7	chr8	101529623	101529773	(43608863)	C	HAL1ME	LINE/L1	(1449)	1016	856	3938935
536	27.9	0.0	7.8	chr8	101773540	101773718	(43364918)	+	MER5B	DNA/hAT-Charlie	5	169	(9)	3939309
27019	3.8	0.1	0.2	chr8	102316941	102323098	(42815538)	+	L1PA3	LINE/L1	1	6151	(4)	3940101
24	12.2	0.0	0.0	chr8	103227168	103227203	(41911433)	+	(TG)n	Simple_repeat	1	36	(0)	3941962
3304	14.4	12.3	1.9	chr8	103227251	103227934	(41910702)	+	MER4CL34	LTR/ERV1	1	765	(0)	3941963
19	14.7	0.0	6.4	chr8	104588904	104588957	(40549679)	+	GA-rich	Low_complexity	1	50	(0)	3943935
15	11.1	0.0	3.2	chr8	106657558	106657588	(38481048)	+	(GCGGG)n	Simple_repeat	1	31	(0)	3946882
12	20.1	0.0	2.8	chr8	107327195	107327230	(37811406)	+	(TTAATT)n	Simple_repeat	1	36	(0)	3947812
2084	18.1	9.4	2.0	chr8	107568730	107581821	(37556815)	+	SATR1	Satellite	1	14059	(0)	3948170
22759	11.2	1.8	3.7	chr8	109214407	109219470	(35919166)	C	L1PA7	LINE/L1	(1363)	5098	1	3950544
12520	9.5	0.3	1.7	chr8	110257508	110258367	(34880269)	C	L1PA7	LINE/L1	(5621)	840	2	3951908
16	18.3	2.2	2.2	chr8	116874055	116874099	(28264537)	+	(CCCGC)n	Simple_repeat	1	46	(0)	3960759
17965	12.8	2.3	0.2	chr8	122001271	122007235	(23131401)	+	L1PA6	LINE/L1	3	6153	(1)	3969222
182	30.6	0.0	0.0	chr8	122919417	122919465	(22219171)	C	L2a	LINE/L2	(2)	3424	3376	3970797
273	30.9	4.1	5.6	chr8	124000920	124001169	(21137467)	+	L3	LINE/CR1	3714	3959	(140)	3972920
23	15.1	1.5	7.2	chr8	124372428	124372495	(20766141)	+	G-rich	Low_complexity	1	69	(0)	3973578
19	15.8	1.8	5.4	chr8	124372641	124372695	(20765941)	+	(GCAGCC)n	Simple_repeat	1	56	(0)	3973579
1843	12.8	3.3	4.9	chr8	124667796	124668100	(20470536)	+	AluJo	SINE/Alu	1	300	(12)	3974103
306	10.9	5.2	0.0	chr8	131919260	131919314	(13219322)	C	L1MB7	LINE/L1	(0)	6184	6127	3987638
2493	7.6	0.7	0.3	chr8	131919316	131919618	(13219018)	+	AluY	SINE/Alu	1	304	(7)	3987639
231	32.3	3.0	0.0	chr8	134421196	134421291	(10717345)	C	L2	LINE/L2	(2351)	1068	970	3992289
255	29.0	4.2	0.0	chr8	134421301	134421369	(10717267)	C	MLT1O	LTR/ERVL-MaLR	(334)	208	137	3992290
585	27.0	4.7	0.0	chr8	134421444	134421606	(10717030)	+	MIR	SINE/MIR	51	221	(41)	3992291
274	24.7	6.7	3.4	chr8	134460426	134461787	(10676849)	+	(GT)n	Simple_repeat	1	1453	(0)	3992362
1035	22.8	11.6	15.8	chr8	135991113	135991743	(9146893)	+	MLT2F	LTR/ERVL	9	606	(57)	3994925
307	27.6	8.4	2.6	chr8	139197010	139197165	(5941471)	+	LTR82A	LTR/ERVL	14	179	(693)	3999966
2294	10.4	3.9	2.7	chr8	140027648	140028023	(5110613)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4001233
15	9.4	11.8	0.0	chr8	140028124	140028157	(5110479)	+	(AT)n	Simple_repeat	1	38	(0)	4001234
1227	25.1	2.7	4.7	chr8	140251592	140251972	(4886664)	+	MLT1A	LTR/ERVL-MaLR	1	373	(1)	4001620
1661	17.2	2.0	4.8	chr8	141204680	141204993	(3933643)	+	AluJo	SINE/Alu	1	305	(7)	4003340
293	25.9	4.5	0.0	chr8	141350938	141351022	(3787614)	C	MIR3	SINE/MIR	(32)	176	88	4003522
645	26.3	7.2	0.5	chr8	141380592	141380812	(3757824)	+	MIR	SINE/MIR	14	262	(6)	4003567
218	22.8	1.6	3.5	chr8	142139719	142139813	(2998823)	+	MIR	SINE/MIR	106	202	(66)	4004569
774	24.3	9.9	2.0	chr8	142140267	142140610	(2998026)	+	HAL1	LINE/L1	1424	1797	(710)	4004570
521	23.8	8.2	2.9	chr8	142489530	142489702	(2648934)	C	MIRb	SINE/MIR	(81)	187	5	4004959
13	15.1	5.1	2.4	chr8	142490066	142490104	(2648532)	+	(CCAGG)n	Simple_repeat	1	41	(0)	4004960
419	26.8	1.9	0.1	chr8	142490110	142490246	(2648390)	+	MIR	SINE/MIR	44	183	(25)	4004961
256	24.2	2.9	0.0	chr8	142497107	142497172	(2641464)	C	MIRc	SINE/MIR	(112)	156	89	4004971
279	14.9	0.0	0.0	chr8	142533823	142533869	(2604767)	C	Kanga1a	DNA/TcMar-Tc2	(446)	308	262	4005015
247	22.6	6.7	0.0	chr8	142534368	142534451	(2604185)	+	HAL1	LINE/L1	450	539	(1968)	4005016
10610	4.5	0.8	9.0	chr8	142826372	142827879	(2310757)	C	SVA_B	Retroposon/SVA	(0)	1383	1	4005353
262	32.4	9.3	5.3	chr8	142838259	142838783	(2299853)	C	L1MEg	LINE/L1	(6268)	835	288	4005364
25251	6.9	0.9	0.2	chr8	142849961	142856074	(2282562)	+	L1PA6	LINE/L1	174	6314	(13)	4005381
3410	27.3	7.4	4.3	chr8	143177582	143178817	(1959819)	C	HERV4_I-int	LTR/ERV1	(4604)	1935	625	4005860
592	23.6	13.2	8.9	chr8	143245688	143245933	(1892703)	+	MLT1E1	LTR/ERVL-MaLR	366	623	(31)	4005972
615	31.9	11.9	0.6	chr8	143401886	143402377	(1736259)	C	L1MC2	LINE/L1	(7)	6337	5783	4006169
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
27	0.0	3.5	0.0	chr8	143933868	143933896	(1204740)	+	(TGCCCC)n	Simple_repeat	1	30	(0)	4006858
2220	19.0	7.0	0.8	chr8	143995654	143996178	(1142458)	+	MER90a	LTR/ERV1	29	588	(26)	4006929
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
2290	9.6	0.7	0.3	chr8	144196816	144197118	(941518)	+	AluSg	SINE/Alu	1	304	(6)	4007275
1391	21.4	7.9	2.2	chr8	144197119	144197417	(941219)	C	MLT1F	LTR/ERVL-MaLR	(65)	483	159	4007274
11	14.7	3.7	8.9	chr8	144395554	144395607	(743029)	+	G-rich	Low_complexity	1	56	(0)	4007566
225	32.7	10.5	0.0	chr8	144554685	144554786	(583850)	C	MIRc	SINE/MIR	(121)	147	31	4007732
2209	10.4	0.3	0.0	chr8	144832447	144832735	(305901)	+	AluSx1	SINE/Alu	1	290	(22)	4008173
3144	22.7	2.9	1.7	chr8	145056119	145056826	(81810)	+	HERVK13-int	LTR/ERVK	1	717	(7399)	4008474
264	18.8	12.3	0.0	chr8	145056944	145057007	(81629)	+	HERVK13-int	LTR/ERVK	762	834	(7282)	4008474
15	16.4	2.9	0.0	chr9	117996	118029	(138276688)	+	(CCT)n	Simple_repeat	1	35	(0)	4008659
23	5.2	4.8	2.3	chr9	975480	975521	(137419196)	+	(TTGT)n	Simple_repeat	1	44	(0)	4010078
253	25.8	1.5	10.2	chr9	2933223	2933369	(135461348)	+	MER52D	LTR/ERV1	360	493	(1630)	4012877
6696	17.6	11.3	0.5	chr9	2933868	2935341	(135459376)	+	MER52D	LTR/ERV1	470	2121	(2)	4012877
18132	9.6	1.2	1.8	chr9	4248930	4254064	(134140653)	C	L1PA7	LINE/L1	(1294)	5167	1	4014724
198	27.8	0.0	14.1	chr9	4254123	4254214	(134140503)	C	L2c	LINE/L2	(5)	3382	3304	4014725
17754	8.8	0.6	0.5	chr9	4448852	4453585	(133941132)	+	L1PA6	LINE/L1	6	5400	(746)	4015077
2549	7.8	0.0	0.0	chr9	4522043	4522350	(133872367)	C	AluY	SINE/Alu	(3)	308	1	4015195
24792	4.6	0.5	0.0	chr9	4915074	4921190	(133473527)	C	L1PA4	LINE/L1	(3)	6152	2	4015888
25099	4.6	0.2	0.0	chr9	4947717	4953848	(133440869)	C	L1PA4	LINE/L1	(6)	6149	8	4015947
10837	10.3	2.7	2.7	chr9	5779202	5782046	(132612671)	+	L1PA7	LINE/L1	5	2885	(3576)	4017002
6106	11.3	2.0	2.8	chr9	7216262	7217171	(131177546)	+	L1PA6	LINE/L1	5	907	(5277)	4019406
6457	9.9	0.8	0.0	chr9	8932462	8933330	(129461387)	C	L1PA7	LINE/L1	(5584)	877	2	4021779
21	0.0	0.0	0.0	chr9	8933341	8933363	(129461354)	+	(T)n	Simple_repeat	1	23	(0)	4021782
2032	22.8	6.6	2.5	chr9	10965944	10968062	(127426655)	+	SATR1	Satellite	1	2207	(47)	4024456
20066	13.3	1.5	2.9	chr9	11765274	11767730	(126626987)	+	L1PA8	LINE/L1	8	2470	(4029)	4025391
1905	17.7	0.0	0.3	chr9	13362472	13362770	(125031947)	C	AluJb	SINE/Alu	(14)	298	1	4027522
665	22.7	7.6	6.2	chr9	13363079	13363351	(125031366)	+	MER39	LTR/ERV1	259	535	(172)	4027523
14	4.9	0.0	0.0	chr9	14692899	14692919	(123701798)	+	(AAAT)n	Simple_repeat	1	21	(0)	4029303
26	15.8	0.0	0.0	chr9	14693150	14693199	(123701518)	+	G-rich	Low_complexity	1	50	(0)	4029304
12	18.5	11.1	1.4	chr9	14693201	14693263	(123701454)	+	(CGCT)n	Simple_repeat	1	70	(0)	4029305
6076	11.6	9.6	0.8	chr9	14831359	14833084	(123561633)	+	HUERS-P3b-int	LTR/ERV1	764	2642	(4776)	4029507
2076	18.0	9.9	3.5	chr9	14963691	14967893	(123426824)	C	SATR1	Satellite	(152)	4470	1	4029704
22607	9.0	2.6	2.2	chr9	15746634	15752905	(122641812)	+	L1PA6	LINE/L1	13	6339	(0)	4031037
17	4.9	0.0	0.0	chr9	16272578	16272598	(122122119)	+	(A)n	Simple_repeat	1	21	(0)	4031708
3109	0.0	0.0	1.0	chr9	16389410	16389723	(122004994)	+	AluYa5	SINE/Alu	1	311	(0)	4031890
23	21.8	1.0	8.0	chr9	16727115	16727213	(121667504)	+	(GCGG)n	Simple_repeat	1	100	(0)	4032281
214	27.9	5.1	4.1	chr9	18022177	18022273	(120372444)	+	MIR3	SINE/MIR	9	106	(162)	4034109
23013	9.2	1.1	2.3	chr9	18558025	18564471	(119830246)	C	L1PA7	LINE/L1	(15)	6454	4	4034836
2181	8.1	0.0	6.2	chr9	19380563	19380869	(119013848)	+	AluSx1	SINE/Alu	1	288	(24)	4036215
198	16.7	6.7	0.0	chr9	20114639	20114680	(118280037)	C	L2a	LINE/L2	(0)	3426	3382	4037412
3093	17.7	10.0	2.5	chr9	20114827	20115552	(118279165)	C	LTR48	LTR/ERV1	(0)	787	1	4037413
6561	14.9	6.5	1.4	chr9	21255528	21257285	(117137432)	+	MER50-int	LTR/ERV1	1	1849	(5356)	4039010
8287	19.7	3.1	3.1	chr9	21257282	21258669	(117136048)	+	MER50-int	LTR/ERV1	2789	4171	(3034)	4039010
13	29.4	1.3	5.3	chr9	21335468	21335551	(117059166)	+	G-rich	Low_complexity	1	80	(0)	4039097
10342	14.5	1.4	0.4	chr9	23381935	23383546	(115011171)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	4041717
13909	17.2	3.1	3.0	chr9	25962468	25963899	(112430818)	C	HUERS-P3b-int	LTR/ERV1	(4783)	2635	1192	4045034
9877	5.3	1.4	14.9	chr9	26663625	26665225	(111729492)	+	SVA_B	Retroposon/SVA	2	1383	(0)	4045954
20357	9.3	2.7	3.4	chr9	27251185	27255812	(111138905)	+	L1PA7	LINE/L1	4	4654	(1815)	4046877
9747	3.6	0.8	15.1	chr9	34038300	34039864	(104354853)	+	SVA_C	Retroposon/SVA	46	1384	(0)	4056546
16	14.9	4.2	4.0	chr9	34629071	34629118	(103765599)	+	G-rich	Low_complexity	1	50	(0)	4057697
2257	15.6	1.3	14.4	chr9	35144259	35144331	(103250386)	+	LTR19-int	LTR/ERV1	1933	1991	(3595)	4058423
3742	13.8	9.8	2.7	chr9	35144310	35145010	(103249707)	+	MER51-int	LTR/ERV1	592	1347	(6469)	4058428
35343	12.9	9.3	9.0	chr9	35191709	35193366	(103201351)	C	HUERS-P3b-int	LTR/ERV1	(4328)	3044	1006	4058506
222	34.8	10.0	6.2	chr9	37348832	37349091	(101045626)	+	L2c	LINE/L2	3020	3290	(97)	4062471
11	24.4	4.0	1.9	chr9	38069374	38069423	(100325294)	+	(GGCCCGG)n	Simple_repeat	1	52	(0)	4063872
9321	16.9	2.7	5.6	chr9	38663495	38664913	(99729804)	+	L1MC	LINE/L1	3210	4594	(1552)	4064969
193	25.0	1.4	5.7	chr9	39809834	39809921	(98584796)	+	MIRb	SINE/MIR	115	195	(73)	4066646
16	25.3	3.8	3.6	chr9	41074528	41074607	(97320110)	+	(CTGCGCC)n	Simple_repeat	1	83	(0)	4068150
15	23.7	2.0	1.9	chr9	41074594	41074644	(97320073)	+	(CGCC)n	Simple_repeat	1	52	(0)	4068151
2042	20.1	7.8	3.8	chr9	41110592	41111069	(97283648)	+	SATR1	Satellite	1	566	(2282)	4068219
296	22.8	6.0	20.1	chr9	41111070	41111403	(97283314)	C	SATR2	Satellite	(35)	284	1	4068220
1961	13.2	1.6	2.3	chr9	41234464	41234772	(97159945)	C	Tigger1	DNA/TcMar-Tigger	(1097)	1321	1015	4068374
625	14.0	2.0	0.0	chr9	41234775	41234874	(97159843)	C	Tigger1	DNA/TcMar-Tigger	(1911)	507	406	4068377
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
13	18.9	2.8	0.0	chr9	62807627	62807662	(75587055)	+	(GGCCA)n	Simple_repeat	1	37	(0)	4073678
18600	10.6	1.7	6.0	chr9	62840284	62843326	(75551391)	C	L1PBa	LINE/L1	(927)	5198	2140	4073706
636	14.6	1.9	0.0	chr9	63818503	63818605	(74576112)	+	Tigger1	DNA/TcMar-Tigger	406	510	(1908)	4074768
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
1319	16.7	2.2	2.2	chr9	65411608	65411834	(72982883)	+	AluJo	SINE/Alu	85	311	(1)	4076221
886	19.5	6.7	5.3	chr9	69028673	69028850	(69365867)	+	LTR37B	LTR/ERV1	197	377	(91)	4080815
1893	19.5	1.0	4.7	chr9	69028851	69029140	(69365577)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	111	4080820
2407	6.3	0.3	3.0	chr9	69029141	69029443	(69365274)	C	AluSx1	SINE/Alu	(17)	295	1	4080821
759	21.6	5.8	1.8	chr9	69035205	69035421	(69359296)	C	MIR	SINE/MIR	(2)	260	35	4080838
14	10.0	6.2	0.0	chr9	69035827	69035858	(69358859)	+	(ACCCAG)n	Simple_repeat	1	34	(0)	4080839
23	19.6	4.7	0.0	chr9	69035970	69036033	(69358684)	+	(GCCGCAC)n	Simple_repeat	1	67	(0)	4080840
18	20.1	4.4	4.2	chr9	69516200	69516267	(68878450)	+	(CCG)n	Simple_repeat	1	71	(0)	4081689
4066	16.4	11.7	3.0	chr9	69913298	69914136	(68480581)	+	L1MC3	LINE/L1	6752	7687	(98)	4082315
2733	11.7	1.9	0.9	chr9	69914137	69914559	(68480158)	+	MSTA	LTR/ERVL-MaLR	1	427	(1)	4082316
4066	16.4	11.7	3.0	chr9	69914560	69914654	(68480063)	+	L1MC3	LINE/L1	7688	7778	(7)	4082315
15471	7.8	2.5	0.6	chr9	71595566	71596986	(66797731)	+	L1PA5	LINE/L1	4	1470	(4714)	4084895
17	16.4	0.0	0.0	chr9	75028093	75028126	(63366591)	+	(GCC)n	Simple_repeat	1	34	(0)	4090399
217	36.8	7.8	4.0	chr9	75941513	75941710	(62453007)	+	MamTip2	DNA/hAT-Tip100	20	225	(80)	4091706
676	30.2	8.3	4.8	chr9	75942033	75942345	(62452372)	C	MER102a	DNA/hAT-Charlie	(4)	326	2	4091707
2289	17.0	9.2	9.5	chr9	77079563	77080237	(61314480)	C	LTR8A	LTR/ERV1	(54)	673	1	4093703
23446	10.4	1.7	1.9	chr9	78200649	78205590	(60189127)	+	L1PA7	LINE/L1	4	4961	(1500)	4095412
17554	6.9	0.5	0.5	chr9	78334340	78336184	(60058533)	+	L1PA6	LINE/L1	3	1853	(4331)	4095613
13	26.1	2.4	0.0	chr9	79572466	79572507	(58822210)	+	(GCG)n	Simple_repeat	1	43	(0)	4097447
13	19.5	0.0	2.7	chr9	79572840	79572876	(58821841)	+	G-rich	Low_complexity	1	37	(0)	4097448
196	32.4	12.1	2.9	chr9	79893831	79893935	(58500782)	C	L2c	LINE/L2	(2)	3385	3270	4097890
6665	6.2	0.5	0.8	chr9	80344879	80345776	(58048941)	+	L1P1	LINE/L1	2	896	(5259)	4098491
27200	3.0	0.2	0.0	chr9	80654117	80660135	(57734582)	C	L1PA2	LINE/L1	(3)	6152	124	4098856
26615	4.1	0.3	0.1	chr9	81217156	81223297	(57171420)	+	L1PA4	LINE/L1	4	6149	(6)	4099588
22681	9.4	1.0	0.9	chr9	82215596	82222079	(56172638)	+	L1PA7	LINE/L1	1	6467	(2)	4101209
6609	8.5	2.2	2.0	chr9	83947513	83949108	(54445609)	+	SVA_B	Retroposon/SVA	30	1387	(0)	4103801
12135	9.4	1.2	0.3	chr9	84042519	84044523	(54350194)	C	L1PA7	LINE/L1	(4461)	2038	8	4103970
6019	10.1	4.1	39.0	chr9	84525761	84528257	(53866460)	C	SVA_A	Retroposon/SVA	(0)	1387	20	4104870
227	30.7	18.4	1.6	chr9	84930326	84930838	(53463879)	C	L2	LINE/L2	(2632)	787	169	4105474
258	32.7	14.3	2.5	chr9	85525542	85525831	(52868886)	+	L2c	LINE/L2	2913	3229	(146)	4106328
850	27.5	5.6	2.1	chr9	85599876	85600116	(52794601)	+	MIR	SINE/MIR	8	257	(5)	4106438
527	24.7	4.2	2.4	chr9	85600117	85600290	(52794427)	C	L1MEj	LINE/L1	(1004)	1156	1005	4106439
1973	17.0	0.3	0.0	chr9	87485372	87485682	(50909035)	C	AluJo	SINE/Alu	(0)	312	1	4109578
2620	5.5	0.7	0.0	chr9	87485867	87486174	(50908543)	C	AluY	SINE/Alu	(1)	310	1	4109579
1697	10.1	1.1	2.3	chr9	87834420	87834682	(50560035)	C	LTR1	LTR/ERV1	(0)	783	524	4110066
1790	11.9	3.7	0.0	chr9	87834691	87834975	(50559742)	C	LTR1	LTR/ERV1	(487)	296	1	4110066
3276	9.1	4.4	3.4	chr9	88419071	88419569	(49975148)	+	LTR10F	LTR/ERV1	1	504	(7)	4111144
1792	21.2	8.7	8.1	chr9	88808775	88809261	(49585456)	+	MER74A	LTR/ERVL	39	528	(30)	4111754
235	16.7	5.3	3.6	chr9	89318128	89318183	(49076534)	+	L2a	LINE/L2	3113	3169	(257)	4112397
3607	22.0	3.8	1.5	chr9	90359365	90360235	(48034482)	C	L1MD1	LINE/L1	(0)	6633	5742	4113731
2595	23.3	4.0	0.7	chr9	90360242	90361076	(48033641)	C	L1MD1	LINE/L1	(1432)	5105	4217	4113731
255	29.7	11.9	1.7	chr9	92670393	92670512	(45724205)	+	MIRc	SINE/MIR	37	170	(92)	4117046
241	18.0	10.8	0.0	chr9	93037306	93037386	(45357331)	C	MIR1_Amn	SINE/MIR	(81)	181	79	4117587
233	25.0	1.8	0.0	chr9	93037662	93037717	(45357000)	C	MIR3	SINE/MIR	(51)	157	101	4117588
13	7.6	7.1	0.0	chr9	93451640	93451667	(44943050)	+	(GCCCC)n	Simple_repeat	1	30	(0)	4118196
39	21.8	3.0	4.3	chr9	93451782	93451915	(44942802)	+	(CGCC)n	Simple_repeat	1	138	(0)	4118197
2482	8.2	0.0	0.0	chr9	93474587	93474892	(44919825)	C	AluY	SINE/Alu	(5)	306	1	4118224
1808	15.7	8.1	1.8	chr9	93475047	93475383	(44919334)	C	Tigger4b	DNA/TcMar-Tigger	(0)	361	2	4118225
1557	25.7	5.1	1.3	chr9	93639626	93640074	(44754643)	C	L1M4b	LINE/L1	(6348)	519	53	4118413
2708	22.1	4.6	3.3	chr9	93640091	93641302	(44753415)	C	L1MCb	LINE/L1	(5038)	1713	387	4118410
464	24.5	11.7	2.4	chr9	93814902	93815110	(44579607)	+	MER113	DNA/hAT-Charlie	237	467	(54)	4118597
430	32.2	6.3	0.6	chr9	95254088	95254265	(43140452)	+	L1ME3B	LINE/L1	6049	6237	(5)	4120924
24533	7.8	1.6	1.2	chr9	95254281	95260702	(43134015)	+	L1PA7	LINE/L1	4	6469	(0)	4120925
11	21.9	2.2	4.3	chr9	95349842	95349887	(43044830)	+	(GCGCCC)n	Simple_repeat	1	47	(0)	4121077
1684	22.1	9.4	6.6	chr9	95380932	95381366	(43013351)	+	MLT1F	LTR/ERVL-MaLR	72	547	(1)	4121138
192	30.6	4.0	4.0	chr9	96172585	96172659	(42222058)	C	MIRc	SINE/MIR	(123)	145	71	4122352
941	24.1	8.8	6.9	chr9	96349032	96349532	(42045185)	+	LTR48B	LTR/ERV1	2	591	(53)	4122683
2278	10.3	0.3	0.0	chr9	96349533	96349824	(42044893)	C	AluSx1	SINE/Alu	(19)	293	1	4122684
339	32.4	8.8	8.8	chr9	98419628	98419932	(39974785)	+	LTR85a	LTR/Gypsy?	300	604	(98)	4126469
455	26.0	14.4	2.0	chr9	98439958	98440318	(39954399)	+	LTR16	LTR/ERVL	38	456	(0)	4126515
553	25.9	3.7	0.0	chr9	98440320	98440450	(39954267)	C	MIR	SINE/MIR	(114)	148	13	4126514
229	9.1	0.0	0.0	chr9	98481876	98481908	(39912809)	C	L2b	LINE/L2	(0)	3375	3343	4126605
27192	3.8	0.4	0.1	chr9	98508278	98514399	(39880318)	+	L1PA3	LINE/L1	1	6137	(18)	4126656
11	16.9	5.8	5.5	chr9	98796479	98796530	(39598187)	+	(CGCCCT)n	Simple_repeat	1	55	(0)	4127213
23167	9.0	1.4	1.4	chr9	100177037	100183286	(38211431)	+	L1PA7	LINE/L1	215	6469	(0)	4129685
2194	11.0	0.0	0.7	chr9	100442529	100442829	(37951888)	+	AluJo	SINE/Alu	5	303	(9)	4130158
24707	7.4	1.3	0.2	chr9	102594880	102600967	(35793750)	C	L1PA5	LINE/L1	(3)	6151	4	4133271
1473	10.3	3.5	0.0	chr9	103237258	103237481	(35157236)	+	L1PA13	LINE/L1	5891	6122	(41)	4134088
17518	3.2	0.0	0.0	chr9	103237486	103241471	(35153246)	+	L1HS	LINE/L1	125	4110	(2036)	4134089
1719	14.2	9.2	1.7	chr9	103656714	103657063	(34737654)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	4134642
654	20.3	4.5	17.2	chr9	105794552	105794836	(32599881)	+	SATR2	Satellite	1	247	(72)	4138048
2131	17.1	10.0	2.1	chr9	105794837	105794953	(32599764)	C	SATR1	Satellite	(3044)	2129	1925	4138047
1088	23.0	2.8	16.9	chr9	105794954	105795904	(32598813)	C	SATR2	Satellite	(0)	817	1	4138047
2113	17.7	7.4	2.7	chr9	105814536	105816450	(32578267)	C	SATR1	Satellite	(350)	2005	1	4138057
5319	16.6	8.4	0.7	chr9	106532611	106533551	(31861166)	C	LTR28	LTR/ERV1	(0)	1020	1	4139151
313	28.3	3.3	5.4	chr9	108562469	108562659	(29832058)	C	L2c	LINE/L2	(16)	3359	3178	4142907
20	0.0	0.0	0.0	chr9	108562734	108562755	(29831962)	+	(A)n	Simple_repeat	1	22	(0)	4142908
329	29.4	15.6	3.9	chr9	109278595	109278825	(29115892)	+	L2b	LINE/L2	3113	3371	(4)	4144151
2582	3.1	0.0	0.7	chr9	109533127	109533445	(28861272)	C	AluYb8	SINE/Alu	(0)	318	1	4144705
12	28.1	6.2	0.0	chr9	109779952	109780015	(28614702)	+	(GCGC)n	Simple_repeat	1	68	(0)	4145117
5086	11.0	2.4	4.1	chr9	110830187	110831038	(27563679)	C	LTR1A2	LTR/ERV1	(0)	837	1	4146867
2267	11.5	0.0	0.6	chr9	112066864	112067177	(26327540)	C	AluSx	SINE/Alu	(0)	312	1	4149103
13	18.9	4.5	2.2	chr9	112333142	112333185	(26061532)	+	(CCGCGGA)n	Simple_repeat	1	46	(0)	4149606
35	24.5	3.9	2.2	chr9	112333644	112333773	(26060944)	+	(CGCCCC)n	Simple_repeat	1	135	(0)	4149607
31	11.6	4.3	2.8	chr9	112486782	112486850	(25907867)	+	(CCCCG)n	Simple_repeat	1	72	(0)	4149957
24	18.9	4.4	1.4	chr9	112750624	112750691	(25644026)	+	(CCTC)n	Simple_repeat	1	71	(0)	4150443
11	19.5	10.0	1.5	chr9	113060165	113060224	(25334493)	+	(GCCAGCTGC)n	Simple_repeat	1	66	(0)	4150941
955	34.0	4.7	2.7	chr9	113062933	113063595	(25331122)	+	L1MA9	LINE/L1	5622	6298	(14)	4150944
2483	20.8	3.1	0.8	chr9	114242666	114243175	(24151542)	C	Charlie1b	DNA/hAT-Charlie	(0)	523	2	4153246
680	30.1	8.7	3.9	chr9	117623448	117623750	(20770967)	C	LTR79	LTR/ERVL	(91)	436	110	4159781
16	25.6	0.0	3.4	chr9	120636521	120636579	(17758138)	+	A-rich	Low_complexity	1	59	(0)	4165401
5447	4.6	3.9	0.8	chr9	120636704	120637433	(17757284)	+	SVA_B	Retroposon/SVA	625	1377	(6)	4165402
31	21.9	1.9	4.3	chr9	120877199	120877317	(17517400)	+	G-rich	Low_complexity	1	116	(0)	4165885
332	35.9	3.4	0.0	chr9	123360541	123360682	(15034035)	C	MER5A	DNA/hAT-Charlie	(0)	189	43	4170595
1926	11.2	0.0	2.2	chr9	123393997	123394264	(15000453)	C	AluSx	SINE/Alu	(17)	295	34	4170642
7367	3.5	3.0	1.5	chr9	123586950	123587830	(14806887)	C	MER11D	LTR/ERVK	(0)	897	3	4170965
29	22.5	3.4	4.9	chr9	123999648	123999766	(14394951)	+	(CCGCGC)n	Simple_repeat	1	123	(0)	4171689
191	39.8	1.2	0.0	chr9	124487883	124487965	(13906752)	+	L2c	LINE/L2	2759	2842	(577)	4172673
2857	1.0	0.0	0.6	chr9	125199788	125200098	(13194619)	+	AluYb8	SINE/Alu	1	309	(9)	4174123
371	13.6	0.0	4.5	chr9	125200139	125200204	(13194513)	C	AluYe5	SINE/Alu	(10)	300	238	4174124
4398	21.8	8.2	7.0	chr9	125317656	125317997	(13076720)	+	L1M4	LINE/L1	1156	1484	(6033)	4174423
1650	12.6	0.0	0.9	chr9	125318056	125318285	(13076432)	C	AluSx	SINE/Alu	(83)	229	2	4174427
1064	24.7	9.7	3.4	chr9	125387449	125387775	(13006942)	C	ERVL-E-int	LTR/ERVL	(5313)	354	5	4174567
595	19.9	4.9	0.0	chr9	125387780	125387915	(13006802)	C	LTR33C	LTR/ERVL	(0)	629	487	4174567
1128	26.1	9.7	0.0	chr9	125387932	125388295	(13006422)	C	LTR33C	LTR/ERVL	(207)	422	20	4174567
1177	29.3	9.8	2.8	chr9	126218805	126219801	(12174916)	+	L2	LINE/L2	1929	3002	(417)	4176066
705	21.0	5.1	0.0	chr9	126220129	126220314	(12174403)	C	L1MC5	LINE/L1	(3)	9301	9106	4176067
767	20.7	0.7	0.0	chr9	126419339	126419478	(11975239)	+	MER45A	DNA/hAT-Tip100	36	176	(2)	4176386
418	25.5	3.4	4.7	chr9	126419741	126419888	(11974829)	+	MER5A	DNA/hAT-Charlie	21	166	(23)	4176387
709	22.5	3.0	1.2	chr9	127276837	127276998	(11117719)	C	MIR	SINE/MIR	(33)	229	65	4177917
436	24.1	1.8	1.8	chr9	127277077	127277190	(11117527)	C	MER5A1	DNA/hAT-Charlie	(0)	166	53	4177918
12	17.4	3.8	7.3	chr9	127397477	127397529	(10997188)	+	(GCC)n	Simple_repeat	1	55	(0)	4178130
271	28.6	11.9	0.0	chr9	127527458	127527583	(10867134)	C	MIRc	SINE/MIR	(75)	193	51	4178411
255	34.6	2.8	0.0	chr9	127527777	127527880	(10866837)	+	MIR3	SINE/MIR	91	197	(11)	4178412
362	25.2	11.8	3.0	chr9	127527974	127528104	(10866613)	+	MIRb	SINE/MIR	31	174	(94)	4178413
26	21.7	2.4	3.5	chr9	127802798	127802882	(10591835)	+	(GGCGG)n	Simple_repeat	1	87	(0)	4179046
1844	9.8	9.3	1.4	chr9	128192114	128192399	(10202318)	+	AluJb	SINE/Alu	1	311	(1)	4179939
233	36.9	4.3	1.5	chr9	128197076	128197210	(10197507)	+	L2b	LINE/L2	3237	3375	(0)	4179952
12	12.0	3.7	0.0	chr9	128552423	128552449	(9842268)	+	G-rich	Low_complexity	1	28	(0)	4180817
13	8.5	0.0	14.0	chr9	128552779	128552828	(9841889)	+	(GGCGG)n	Simple_repeat	1	50	(0)	4180818
94	27.1	5.3	3.3	chr9	129602494	129602949	(8791768)	+	GA-rich	Low_complexity	1	480	(0)	4183227
17	12.0	0.0	3.3	chr9	129603219	129603248	(8791469)	+	(TG)n	Simple_repeat	1	30	(0)	4183228
2616	4.9	0.0	0.0	chr9	129683454	129683759	(8710958)	+	AluY	SINE/Alu	1	306	(5)	4183390
269	30.6	10.3	5.2	chr9	129683760	129683837	(8710880)	C	L2c	LINE/L2	(124)	3263	3182	4183389
328	31.5	8.2	2.2	chr9	129684204	129684385	(8710332)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	402	4183391
341	25.9	6.1	0.0	chr9	129698736	129698843	(8695874)	C	MIRb	SINE/MIR	(117)	151	37	4183426
34	8.7	0.0	0.0	chr9	130579630	130579678	(7815039)	+	(GCG)n	Simple_repeat	1	49	(0)	4185377
219	26.5	11.3	1.6	chr9	130640726	130640854	(7753863)	C	MIRc	SINE/MIR	(86)	182	41	4185476
256	26.4	1.1	4.4	chr9	130938151	130938241	(7456476)	C	MIRb	SINE/MIR	(102)	166	79	4186045
28	14.5	0.0	1.8	chr9	130947222	130947276	(7447441)	+	(TCAT)n	Simple_repeat	1	55	(0)	4186066
238	29.5	0.0	0.0	chr9	130947641	130947701	(7447016)	C	L1ME3Cz	LINE/L1	(663)	334	274	4186067
234	26.0	1.0	7.4	chr9	131280847	131280942	(7113775)	C	MIR	SINE/MIR	(18)	190	108	4186726
1111	25.4	11.4	2.7	chr9	131660909	131661614	(6733103)	+	L1ME3A	LINE/L1	5348	6171	(2)	4187441
13	25.7	2.1	2.0	chr9	132162991	132163038	(6231679)	+	(GGC)n	Simple_repeat	1	49	(0)	4188355
199	26.8	17.8	0.0	chr9	132514339	132514435	(5880282)	C	MIR3	SINE/MIR	(64)	144	27	4189055
209	31.2	8.2	0.0	chr9	132877843	132877943	(5516774)	C	MIRc	SINE/MIR	(119)	149	41	4189656
13	21.3	1.6	7.8	chr9	132878302	132878364	(5516353)	+	(CGCCG)n	Simple_repeat	1	64	(0)	4189657
200	17.8	1.2	0.0	chr9	132878628	132878677	(5516040)	+	MIR1_Amn	SINE/MIR	110	161	(47)	4189658
2186	10.2	0.0	0.0	chr9	133259289	133259571	(5135146)	+	AluSx1	SINE/Alu	1	283	(29)	4190311
12	12.0	0.0	6.5	chr9	133275842	133275872	(5118845)	+	(GCCCC)n	Simple_repeat	1	31	(0)	4190338
924	28.2	6.5	1.0	chr9	133309584	133309987	(5084730)	C	L1MEi	LINE/L1	(615)	1597	1170	4190390
26769	2.9	0.2	0.1	chr9	133310022	133316045	(5078672)	+	L1PA3	LINE/L1	124	6154	(1)	4190391
12	17.8	0.0	12.3	chr9	133375687	133375751	(5018966)	+	G-rich	Low_complexity	1	65	(0)	4190474
14	26.3	4.9	3.5	chr9	133375819	133375900	(5018817)	+	G-rich	Low_complexity	1	86	(0)	4190475
20	8.8	7.7	3.6	chr9	133375984	133376035	(5018682)	+	(GCTC)n	Simple_repeat	1	56	(0)	4190476
491	26.3	9.7	5.6	chr9	133426527	133426723	(4967994)	C	L1ME4a	LINE/L1	(2)	6122	5917	4190556
385	30.4	13.2	0.8	chr9	133649332	133649457	(4745260)	C	MIRb	SINE/MIR	(94)	174	31	4190895
193	27.8	8.9	4.3	chr9	133974021	133974210	(4420507)	+	L2c	LINE/L2	3062	3265	(110)	4191337
10207	4.7	0.7	5.1	chr9	134075176	134076577	(4318140)	+	SVA_B	Retroposon/SVA	42	1382	(1)	4191497
385	23.3	10.2	2.1	chr9	134314441	134314599	(4080118)	C	MIRb	SINE/MIR	(76)	192	18	4191885
2410	5.8	0.3	1.0	chr9	134603234	134603543	(3791174)	+	AluY	SINE/Alu	1	308	(3)	4192230
19	22.7	1.6	3.2	chr9	135249621	135249692	(3145025)	+	G-rich	Low_complexity	1	70	(0)	4192951
1204	19.7	5.2	6.5	chr9	135250082	135250362	(3144355)	C	MER31B	LTR/ERV1	(96)	370	97	4192952
1136	21.8	8.4	1.8	chr9	135527150	135527546	(2867171)	C	MER74C	LTR/ERVL	(3)	457	32	4193333
1579	11.8	0.5	0.0	chr9	135527559	135527778	(2866939)	+	AluJr	SINE/Alu	1	221	(91)	4193334
12	9.6	5.4	5.1	chr9	136010348	136010384	(2384333)	+	(CTGGCC)n	Simple_repeat	1	39	(0)	4193918
229	31.0	10.1	0.8	chr9	136143350	136143466	(2251251)	+	MIRc	SINE/MIR	16	144	(124)	4194084
329	27.6	6.1	9.0	chr9	136191346	136191526	(2203191)	C	MIRb	SINE/MIR	(62)	206	13	4194140
19279	10.8	0.4	1.0	chr9	136783849	136785013	(1609704)	C	HERVK-int	LTR/ERVK	(3826)	3710	2565	4194804
873	9.8	0.0	0.0	chr9	136880271	136880382	(1514335)	C	AluSg	SINE/Alu	(176)	134	23	4194931
8141	5.4	1.4	0.6	chr9	137004149	137005147	(1389570)	+	LTR13	LTR/ERVK	1	1007	(0)	4195110
193	23.5	0.0	5.6	chr9	137113691	137113744	(1280973)	C	L2b	LINE/L2	(211)	3164	3114	4195238
13	32.8	1.6	0.0	chr9	137113783	137113846	(1280871)	+	G-rich	Low_complexity	1	65	(0)	4195239
17	25.6	1.4	4.2	chr9	137163427	137163497	(1231220)	+	(CCCGC)n	Simple_repeat	1	69	(0)	4195319
1960	13.6	12.4	1.1	chr9	137703858	137704236	(690481)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4196053
278	26.3	7.8	8.4	chr9	137960506	137960733	(433984)	C	L2a	LINE/L2	(213)	3162	2933	4196384
186	20.8	5.4	0.0	chr9	137960768	137960820	(433897)	C	L2a	LINE/L2	(573)	2846	2791	4196384
1374	10.6	1.7	2.3	chr9	137960823	137961083	(433634)	C	L1M4	LINE/L1	(636)	5538	5286	4196385
2233	33.4	11.6	8.5	chr9	138063513	138065608	(329109)	C	HERV16-int	LTR/ERVL	(2321)	2675	501	4196490
508	14.6	1.2	0.0	chrX	2867731	2867812	(153173083)	C	Tigger5b	DNA/TcMar-Tigger	(0)	472	390	4363722
19273	15.6	5.1	6.5	chrX	3040211	3041284	(152999611)	+	MER4B-int	LTR/ERV1	6	1023	(5735)	4364126
2580	10.1	1.9	1.6	chrX	7711556	7711929	(148328966)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4372095
584	24.9	8.3	2.2	chrX	9549269	9549578	(146491317)	+	MER58D	DNA/hAT-Charlie	4	384	(2)	4374987
250	19.8	0.0	0.0	chrX	10165161	10165234	(145875661)	+	L2a	LINE/L2	3016	3090	(336)	4376044
1610	22.0	8.3	5.7	chrX	13073011	13073497	(142967398)	+	MLT1E1A	LTR/ERVL-MaLR	2	621	(59)	4380567
1097	19.4	1.8	5.0	chrX	16115436	16115656	(139925239)	C	L1MC5	LINE/L1	(9)	9295	9086	4385546
740	18.7	15.4	0.5	chrX	16115657	16115844	(139925051)	+	MER58A	DNA/hAT-Charlie	4	224	(0)	4385547
1097	19.4	1.8	5.0	chrX	16115845	16115904	(139924991)	C	L1MC5	LINE/L1	(219)	9085	9023	4385546
2404	8.4	0.0	0.3	chrX	16722248	16722546	(139318349)	+	AluSg	SINE/Alu	2	299	(11)	4386555
12	3.5	9.7	2.9	chrX	16947491	16947521	(139093374)	+	(CTGCTC)n	Simple_repeat	1	34	(0)	4387054
631	26.1	13.2	0.0	chrX	17736605	17736788	(138304107)	C	MIR	SINE/MIR	(28)	234	23	4388318
681	0.0	0.0	0.0	chrX	18674909	18674981	(137365914)	C	tRNA-Val-GTA	tRNA	(3)	73	1	4389954
15	24.2	3.6	1.8	chrX	19288503	19288557	(136752338)	+	(CAA)n	Simple_repeat	1	57	(0)	4391072
26890	4.7	0.4	0.0	chrX	19417066	19423189	(136617706)	+	L1PA4	LINE/L1	8	6155	(0)	4391321
26	20.7	1.6	0.0	chrX	19887481	19887541	(136153354)	+	(GCT)n	Simple_repeat	1	62	(0)	4392146
45	0.0	0.0	0.0	chrX	19887602	19887650	(136153245)	+	(A)n	Simple_repeat	1	49	(0)	4392147
24	20.2	4.4	0.0	chrX	19887765	19887832	(136153063)	+	G-rich	Low_complexity	1	71	(0)	4392148
57	0.0	0.0	0.0	chrX	19990923	19990973	(136049922)	+	(CCG)n	Simple_repeat	1	51	(0)	4392338
16	7.4	0.0	6.1	chrX	19991076	19991108	(136049787)	+	(CCGCC)n	Simple_repeat	1	33	(0)	4392339
979	24.6	0.0	6.3	chrX	22028164	22028336	(134012559)	C	MER58A	DNA/hAT-Charlie	(0)	224	65	4395352
2237	11.4	0.0	1.6	chrX	22028337	22028651	(134012244)	+	AluSz6	SINE/Alu	1	310	(2)	4395353
979	24.6	0.0	6.3	chrX	22028652	22028716	(134012179)	C	MER58A	DNA/hAT-Charlie	(160)	64	1	4395352
17	9.1	0.0	0.0	chrX	22028781	22028804	(134012091)	+	(T)n	Simple_repeat	1	24	(0)	4395354
860	22.0	13.0	0.0	chrX	23782564	23782777	(132258118)	C	Charlie1	DNA/hAT-Charlie	(2535)	246	1	4398056
14	12.3	2.6	5.0	chrX	24025340	24025378	(132015517)	+	(GGCGG)n	Simple_repeat	1	40	(0)	4398622
19	17.6	2.2	0.0	chrX	24025694	24025738	(132015157)	+	G-rich	Low_complexity	1	46	(0)	4398623
12	14.3	4.8	4.5	chrX	24025746	24025787	(132015108)	+	(GTCCCGC)n	Simple_repeat	1	44	(0)	4398624
11	20.6	5.1	0.0	chrX	24150109	24150147	(131890748)	+	(AGGCCGA)n	Simple_repeat	1	41	(0)	4398943
1739	12.9	2.3	0.0	chrX	24428772	24429027	(131611868)	C	Tigger5	DNA/TcMar-Tigger	(0)	2406	2145	4399496
305	21.4	0.0	0.0	chrX	24429026	24429081	(131611814)	C	Tigger5b	DNA/TcMar-Tigger	(410)	62	7	4399497
2094	16.1	4.8	1.4	chrX	24429139	24429497	(131611398)	+	MSTA	LTR/ERVL-MaLR	1	372	(56)	4399498
1068	18.6	0.0	0.6	chrX	24786498	24786674	(131254221)	C	AluJr	SINE/Alu	(1)	311	136	4400157
1352	16.0	5.0	3.0	chrX	24786682	24786945	(131253950)	C	AluJb	SINE/Alu	(0)	312	41	4400158
767	14.9	0.0	0.0	chrX	24786949	24787055	(131253840)	C	FLAM_A	SINE/Alu	(16)	126	20	4400159
4592	13.4	2.5	0.9	chrX	24787056	24787833	(131253062)	C	L1MA8	LINE/L1	(822)	5318	4528	4400156
925	33.8	3.5	1.7	chrX	26267683	26268043	(129772852)	+	MLT1J2-int	LTR/ERVL-MaLR	805	1172	(215)	4402166
4285	14.0	3.9	1.4	chrX	28311422	28312125	(127728770)	C	MER50	LTR/ERV1	(12)	722	1	4405038
1164	17.0	0.4	5.9	chrX	28312126	28312363	(127728532)	+	LTR49-int	LTR/ERV1	26	250	(6081)	4405039
5263	10.1	3.1	1.1	chrX	28322109	28322872	(127718023)	+	LTR17	LTR/ERV1	1	780	(0)	4405049
2458	8.5	0.0	0.0	chrX	30760983	30761263	(125279632)	+	AluSg	SINE/Alu	1	281	(29)	4408744
5766	9.4	3.9	3.5	chrX	30761264	30761343	(125279552)	+	L1PREC2	LINE/L1	6106	6163	(617)	4408739
2073	14.9	13.6	1.9	chrX	30761344	30761720	(125279175)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4408745
5766	9.4	3.9	3.5	chrX	30761721	30762305	(125278590)	+	L1PREC2	LINE/L1	6164	6769	(11)	4408739
27126	3.6	0.0	0.0	chrX	32730899	32736929	(123303966)	+	L1PA3	LINE/L1	125	6155	(0)	4411631
14470	19.4	3.1	2.5	chrX	34931333	34932528	(121108367)	+	L1PA13	LINE/L1	1	1173	(5612)	4414451
4100	14.0	1.1	0.5	chrX	34932529	34933168	(121107727)	+	LTR9D	LTR/ERV1	2	645	(0)	4414452
17874	3.5	0.0	0.1	chrX	35221420	35223880	(120817015)	+	L1HS	LINE/L1	124	2583	(3563)	4414794
2540	3.9	0.0	0.7	chrX	35498212	35498521	(120542374)	C	AluY	SINE/Alu	(0)	311	1	4415166
1734	19.6	1.3	3.7	chrX	35498527	35498907	(120541988)	C	LTR27B	LTR/ERV1	(222)	372	1	4415167
187	26.0	12.3	6.5	chrX	39289683	39289789	(116751106)	+	MIR	SINE/MIR	149	262	(0)	4420279
2055	15.3	1.3	3.6	chrX	39290062	39290447	(116750448)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	14	4420281
2245	15.6	3.0	1.4	chrX	39622138	39622495	(116418400)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4420863
573	29.0	13.9	7.3	chrX	39622496	39622571	(116418324)	+	LTR33	LTR/ERVL	441	505	(10)	4420862
323	25.5	8.7	6.2	chrX	39622793	39622938	(116417957)	+	MamRep605	LTR?	691	840	(9)	4420861
14	20.2	0.0	0.0	chrX	39688908	39688943	(116351952)	+	(CCCTC)n	Simple_repeat	1	36	(0)	4420983
2161	10.7	3.9	2.0	chrX	40270241	40270540	(115770355)	+	AluSz	SINE/Alu	1	306	(6)	4422121
9347	14.6	3.0	2.3	chrX	40815624	40817255	(115223640)	C	MER51-int	LTR/ERV1	(5860)	1956	329	4423125
2645	15.0	0.2	3.8	chrX	40922728	40923178	(115117717)	+	L1MB1	LINE/L1	5729	6163	(5)	4423304
26116	5.1	0.6	0.0	chrX	42650742	42656856	(113384039)	+	L1PA4	LINE/L1	1	6154	(1)	4426269
1763	19.3	0.3	1.4	chrX	44203594	44203889	(111837006)	C	AluJr	SINE/Alu	(19)	293	1	4428459
5597	17.4	2.5	5.4	chrX	44203890	44206263	(111834632)	+	L1PA17	LINE/L1	1185	3460	(3113)	4428458
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
24963	4.8	0.3	0.1	chrX	44983415	44989548	(111051347)	C	L1PA4	LINE/L1	(3)	6152	3	4430140
9085	5.4	0.4	18.4	chrX	45503256	45504943	(110535952)	C	SVA_B	Retroposon/SVA	(0)	1383	1	4430852
30	20.0	2.2	4.3	chrX	46576135	46576225	(109464670)	+	(CCCCTC)n	Simple_repeat	1	93	(0)	4432408
18	19.5	0.0	0.0	chrX	46576429	46576463	(109464432)	+	(T)n	Simple_repeat	1	35	(0)	4432409
1262	27.6	4.1	3.2	chrX	46743977	46744407	(109296488)	C	MLT1J	LTR/ERVL-MaLR	(77)	435	1	4432674
252	26.2	9.4	4.7	chrX	47523114	47523305	(108517590)	C	L1ME4c	LINE/L1	(187)	643	442	4434354
19	21.3	1.9	1.9	chrX	47523359	47523410	(108517485)	+	GA-rich	Low_complexity	1	53	(0)	4434355
37	0.0	0.0	0.0	chrX	47571111	47571142	(108469753)	+	(GT)n	Simple_repeat	1	32	(0)	4434459
8715	4.1	1.4	29.6	chrX	51118584	51120517	(104920378)	C	SVA_B	Retroposon/SVA	(0)	1383	3	4440279
843	16.5	5.4	0.0	chrX	51644528	51644721	(104396174)	C	L1MB4	LINE/L1	(0)	6416	6212	4440911
25645	3.4	0.3	0.0	chrX	51644759	51650770	(104390125)	+	L1PA3	LINE/L1	124	6155	(0)	4440912
1351	16.6	1.2	2.0	chrX	55170308	55170554	(100870341)	+	AluJo	SINE/Alu	45	289	(23)	4446854
2042	13.7	0.3	0.7	chrX	55170897	55171195	(100869700)	C	AluSx3	SINE/Alu	(12)	299	2	4446855
22210	8.7	0.6	0.3	chrX	56194094	56200236	(99840659)	+	L1PA6	LINE/L1	3	6147	(7)	4447924
21908	10.4	1.7	2.4	chrX	56805825	56812210	(99228685)	C	L1PA7	LINE/L1	(4)	6465	5	4448558
14160	17.6	1.3	2.4	chrX	56846444	56851759	(99189136)	+	L1PA8	LINE/L1	6	5228	(1233)	4448596
20112	12.6	3.5	0.7	chrX	57032163	57038470	(99002425)	C	L1PA7	LINE/L1	(8)	6461	1	4448761
5804	12.4	0.9	3.6	chrX	58002024	58002407	(98038488)	+	L1MA1	LINE/L1	4184	4540	(3025)	4449490
11954	11.5	0.7	0.1	chrX	58002419	58002819	(98038076)	+	L1P3	LINE/L1	9	413	(6048)	4449492
38	0.0	0.0	0.0	chrX	58002820	58002854	(98038041)	+	(TTG)n	Simple_repeat	1	35	(0)	4449493
11954	11.5	2.4	1.7	chrX	58002855	58006612	(98034283)	+	L1P3	LINE/L1	414	4190	(2271)	4449492
22840	7.2	0.4	0.3	chrX	64363617	64369772	(91671123)	+	L1PA6	LINE/L1	1	6147	(7)	4451239
10781	12.9	1.4	1.7	chrX	64944372	64946551	(91094344)	C	L1P3	LINE/L1	(4311)	2188	10	4451882
10423	12.2	1.4	1.5	chrX	65000010	65002312	(91038583)	+	L1PA5	LINE/L1	571	2853	(3293)	4451959
5925	3.1	1.3	1.8	chrX	65002313	65003072	(91037823)	+	SVA_C	Retroposon/SVA	627	1382	(2)	4451960
23660	8.5	0.9	0.1	chrX	65166046	65172157	(90868738)	C	L1PA5	LINE/L1	(0)	6154	4	4452103
5260	20.4	3.8	4.3	chrX	65173884	65175334	(90865561)	C	L1PA8	LINE/L1	(5135)	3006	1686	4452102
26456	2.3	0.1	0.0	chrX	66924857	66930874	(89110021)	C	L1PA2	LINE/L1	(7)	6148	124	4454283
1887	19.2	0.0	0.0	chrX	68506418	68506724	(87534171)	+	AluJr	SINE/Alu	1	307	(5)	4456487
862	21.5	0.6	0.0	chrX	68506732	68506903	(87533992)	C	FAM	SINE/Alu	(2)	183	11	4456488
296	16.3	11.5	4.7	chrX	68506911	68507039	(87533856)	C	L1MC5	LINE/L1	(226)	9078	8940	4456486
1020	19.4	1.1	0.0	chrX	68507047	68507232	(87533663)	+	MER58A	DNA/hAT-Charlie	37	224	(0)	4456489
19195	13.8	1.4	3.3	chrX	69643451	69649211	(86391684)	C	L1PA10	LINE/L1	(837)	6744	1	4458538
13	16.2	2.7	2.6	chrX	70063460	70063496	(85977399)	+	(TTTTCTC)n	Simple_repeat	1	38	(0)	4459041
333	27.4	6.2	1.9	chrX	70150489	70150596	(85890299)	+	HAL1M8	LINE/L1	5	117	(2874)	4459206
722	21.6	1.8	3.0	chrX	70150595	70150761	(85890134)	+	L1MEf	LINE/L1	72	236	(5900)	4459207
183	25.0	4.2	10.5	chrX	70150770	70150845	(85890050)	+	L2c	LINE/L2	3290	3360	(27)	4459208
216	32.2	13.9	4.1	chrX	70150897	70150960	(85889935)	+	MIRc	SINE/MIR	2	69	(199)	4459209
2555	6.0	0.0	0.0	chrX	70150961	70151260	(85889635)	C	AluSq2	SINE/Alu	(13)	300	1	4459210
560	9.7	0.0	12.3	chrX	70638815	70638902	(85401993)	+	L1M3e	LINE/L1	4188	4263	(2837)	4459971
27279	3.1	0.1	0.2	chrX	70638903	70644939	(85395956)	+	L1PA3	LINE/L1	300	6328	(0)	4459974
9350	3.0	2.0	18.5	chrX	70678935	70680596	(85360299)	+	SVA_D	Retroposon/SVA	2	1384	(2)	4460025
15	11.6	0.0	0.0	chrX	71667711	71667738	(84373157)	+	(CTCGG)n	Simple_repeat	1	28	(0)	4462037
16	17.5	2.6	0.0	chrX	71667936	71667974	(84372921)	+	G-rich	Low_complexity	1	40	(0)	4462038
6940	8.1	2.8	3.8	chrX	71876247	71877783	(84163112)	C	SVA_B	Retroposon/SVA	(1)	1382	8	4462306
26564	4.7	0.3	0.1	chrX	71897088	71903211	(84137684)	C	L1PA4	LINE/L1	(16)	6139	3	4462342
246	30.8	5.7	7.1	chrX	72018233	72018428	(84022467)	+	MIRb	SINE/MIR	8	200	(68)	4462538
12410	8.1	1.5	1.8	chrX	72437038	72440594	(83600301)	+	L1P3	LINE/L1	1	3571	(2890)	4463374
5486	10.0	3.1	2.4	chrX	73881707	73882849	(82158046)	+	SVA_B	Retroposon/SVA	62	1043	(340)	4464863
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
9284	4.9	0.4	15.7	chrX	74097733	74099338	(81941557)	+	SVA_B	Retroposon/SVA	1	1360	(23)	4465176
1739	15.0	2.2	9.5	chrX	76068456	76068801	(79972094)	+	L1PA15	LINE/L1	5762	6081	(84)	4467217
26864	3.9	0.1	0.0	chrX	76068804	76074837	(79966058)	+	L1PA3	LINE/L1	125	6160	(173)	4467218
27219	3.3	0.1	0.0	chrX	76267406	76273429	(79767466)	+	L1PA2	LINE/L1	124	6151	(4)	4467383
16	0.0	0.0	0.0	chrX	76273445	76273461	(79767434)	+	(A)n	Simple_repeat	1	17	(0)	4467384
4268	15.8	0.3	0.4	chrX	76273463	76274154	(79766741)	C	L1PA7	LINE/L1	(5766)	695	5	4467382
1376	16.0	0.4	4.4	chrX	76498784	76499057	(79541838)	C	L1PB1	LINE/L1	(5738)	1125	863	4467528
4906	15.5	0.7	1.4	chrX	76499055	76500000	(79540895)	C	L1PB1	LINE/L1	(1)	6150	5213	4467533
18912	10.8	1.0	0.7	chrX	76777623	76781244	(79259651)	C	L1PA6	LINE/L1	(2552)	3594	5	4467719
2836	25.5	9.2	4.7	chrX	77527207	77528494	(78512401)	+	L1PA12	LINE/L1	8	1632	(5909)	4468416
19170	8.9	2.7	2.0	chrX	77530646	77533792	(78507103)	+	L1PA11	LINE/L1	5036	8169	(0)	4468417
3289	10.1	1.0	2.9	chrX	78075884	78076374	(77964521)	C	LTR10F	LTR/ERV1	(0)	511	30	4469449
24986	7.2	0.5	0.1	chrX	80060559	80066695	(75974200)	C	L1PA6	LINE/L1	(11)	6143	1	4471401
22724	9.4	0.7	0.8	chrX	81265209	81271382	(74769513)	C	L1PA7	LINE/L1	(0)	6327	178	4472704
26906	3.6	0.2	0.1	chrX	81339893	81345906	(74694989)	C	L1PA3	LINE/L1	(4)	6151	126	4472757
35252	16.1	2.0	0.9	chrX	83008263	83014326	(73026569)	C	HUERS-P3-int	LTR/ERV1	(3)	8916	1328	4474450
2560	23.3	3.2	1.4	chrX	83014360	83015413	(73025482)	C	HUERS-P3-int	LTR/ERV1	(7764)	1155	1	4474450
15090	3.3	0.0	0.1	chrX	83838052	83839860	(72201035)	C	L1HS	LINE/L1	(4222)	1810	3	4475308
11034	14.1	2.4	1.2	chrX	84065825	84068298	(71972597)	+	L1PA8	LINE/L1	6	2483	(4000)	4475534
24655	7.0	0.5	0.1	chrX	85127654	85133787	(70907108)	C	L1PA6	LINE/L1	(8)	6146	3	4476678
246	28.8	4.8	0.0	chrX	85223982	85224040	(70816855)	C	MIR	SINE/MIR	(186)	76	15	4476801
1177	22.9	5.3	0.8	chrX	85224042	85224309	(70816586)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	187	4476802
373	21.4	12.0	6.4	chrX	85224340	85224449	(70816446)	C	MLT1C	LTR/ERVL-MaLR	(386)	119	3	4476802
1209	24.8	12.6	4.2	chrX	86014090	86014571	(70026324)	+	L1MEd	LINE/L1	1038	1565	(5538)	4477597
451	16.5	0.0	3.4	chrX	86014573	86014660	(70026235)	+	LTR28C	LTR/ERV1	1045	1129	(0)	4477604
449	15.3	0.0	0.0	chrX	86014704	86014775	(70026120)	+	Alu	SINE/Alu	1	72	(239)	4477605
324	25.4	8.9	6.1	chrX	86014793	86014989	(70025906)	+	L1MEd	LINE/L1	1639	1841	(5262)	4477597
32384	18.9	3.8	3.4	chrX	86317134	86324032	(69716863)	C	LTR25-int	LTR/ERV1	(253)	6935	2	4477954
769	32.4	1.3	2.3	chrX	89292235	89292632	(66748263)	+	L1ME3Cz	LINE/L1	226	619	(378)	4481254
27407	3.1	0.1	0.1	chrX	89292630	89298657	(66742238)	+	L1PA3	LINE/L1	125	6155	(0)	4481255
9149	18.5	2.1	1.6	chrX	89759471	89761837	(66279058)	C	HUERS-P3-int	LTR/ERV1	(5635)	3284	752	4481765
7767	13.7	7.0	0.8	chrX	94236771	94238405	(61802490)	C	L1PBa1	LINE/L1	(4835)	2028	292	4486716
9722	14.0	4.1	0.8	chrX	94634497	94636071	(61404824)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	4487171
2247	15.3	0.8	0.3	chrX	94636072	94636444	(61404451)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4487171
37	14.7	1.4	0.0	chrX	96933249	96933317	(59107578)	+	(TTCCTT)n	Simple_repeat	1	70	(0)	4489884
1224	16.4	1.1	0.0	chrX	96933319	96933501	(59107394)	C	AluJb	SINE/Alu	(1)	311	127	4489885
8776	3.6	0.2	17.9	chrX	97274642	97276308	(58764587)	C	SVA_C	Retroposon/SVA	(0)	1384	14	4490408
24111	7.3	0.7	0.6	chrX	97409399	97414370	(58626525)	+	L1PA6	LINE/L1	174	5129	(1190)	4490662
12215	9.6	1.2	1.6	chrX	100266528	100269562	(55771333)	+	L1PA7	LINE/L1	2	3055	(3406)	4494084
12	23.3	0.0	0.0	chrX	101539557	101539591	(54501304)	+	A-rich	Low_complexity	1	35	(0)	4496181
1963	33.9	4.5	3.9	chrX	101861844	101863376	(54177519)	+	PABL_B-int	LTR/ERV1	2765	4308	(2814)	4496573
4220	14.0	2.3	1.0	chrX	104610893	104611556	(51429339)	C	L1P2	LINE/L1	(5224)	1237	563	4500453
2686	5.8	0.0	0.0	chrX	104611557	104611864	(51429031)	+	AluY	SINE/Alu	2	309	(2)	4500455
11920	11.7	1.1	0.5	chrX	104826134	104829583	(51211312)	C	L1P3	LINE/L1	(3012)	3449	10	4500756
5240	13.1	7.6	1.1	chrX	106122353	106123233	(49917662)	C	MER4B-int	LTR/ERV1	(5608)	1150	208	4502409
6202	12.1	2.7	1.1	chrX	106879096	106880822	(49160073)	+	L1MA6	LINE/L1	4536	6288	(12)	4503295
2179	12.5	0.0	0.3	chrX	108976596	108976891	(47064004)	C	AluSz	SINE/Alu	(15)	297	3	4506400
2524	13.5	1.3	4.5	chrX	108976892	108977137	(47063758)	+	L1MA3	LINE/L1	6890	7122	(602)	4506394
8931	7.4	16.0	0.8	chrX	109875087	109876422	(46164473)	C	LTR12C	LTR/ERV1	(0)	1579	3	4507495
7061	10.5	0.7	3.5	chrX	110604324	110605829	(45435066)	+	L1PA7	LINE/L1	2156	3619	(2842)	4508658
25813	3.4	0.2	0.0	chrX	110605829	110611851	(45429044)	+	L1PA3	LINE/L1	124	6152	(3)	4508661
7502	5.3	1.5	0.0	chrX	112229684	112230662	(43810233)	C	L1P1	LINE/L1	(5160)	995	2	4511122
22105	7.5	1.7	0.1	chrX	113206632	113212667	(42828228)	C	L1PA6	LINE/L1	(20)	6134	7	4512526
22361	9.5	1.3	2.5	chrX	113691947	113698365	(42342530)	C	L1PA7	LINE/L1	(11)	6458	5	4513084
27361	3.2	0.1	0.0	chrX	118031730	118037757	(38003138)	+	L1PA3	LINE/L1	126	6155	(0)	4518450
2703	7.7	1.1	0.3	chrX	118593450	118593801	(37447094)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4519530
17	27.1	0.0	3.3	chrX	120250794	120250854	(35790041)	+	(CGG)n	Simple_repeat	1	61	(0)	4522654
25512	14.7	2.6	2.4	chrX	125435603	125440136	(30600759)	C	HUERS-P3-int	LTR/ERV1	(4047)	4872	5	4530111
12611	16.9	2.3	2.6	chrX	125785730	125788696	(30252199)	C	LTR25-int	LTR/ERV1	(3046)	4142	755	4530467
27264	2.9	0.0	0.3	chrX	126185219	126191252	(29849643)	C	L1PA2	LINE/L1	(0)	6155	136	4530868
5366	20.1	8.1	5.7	chrX	127900038	127901502	(28139393)	+	MER50-int	LTR/ERV1	330	1832	(5373)	4532779
2690	14.2	0.5	0.5	chrX	127901501	127901925	(28138970)	+	MER83B-int	LTR/ERV1	3638	4062	(818)	4532780
16	17.9	9.2	1.4	chrX	129522781	129522806	(26518089)	+	(AGGCGG)n	Simple_repeat	1	53	(18)	4534802
13	3.6	6.2	5.9	chrX	129522807	129522838	(26518057)	+	GA-rich	Low_complexity	1	34	(0)	4534803
16	17.9	9.2	1.4	chrX	129522839	129522845	(26518050)	+	(AGGCGG)n	Simple_repeat	54	71	(0)	4534802
45547	8.4	2.1	2.3	chrX	130280532	130283685	(25757210)	+	HERV4_I-int	LTR/ERV1	1	3108	(3431)	4536284
3143	23.3	6.8	1.1	chrX	130672556	130673930	(25366965)	+	L1PA15-16	LINE/L1	1227	2508	(4411)	4536913
20832	10.4	1.4	1.0	chrX	131159555	131164886	(24876009)	C	L1P3	LINE/L1	(1129)	5332	1	4537661
4118	35.6	5.3	4.7	chrX	131164905	131167237	(24873658)	+	ERVL-E-int	LTR/ERVL	459	2826	(2841)	4537662
21934	9.1	1.2	0.7	chrX	131427971	131434414	(24606481)	+	L1PA7	LINE/L1	1	6469	(0)	4538052
2080	11.1	0.0	6.3	chrX	132132377	132132692	(23908203)	C	AluSx	SINE/Alu	(16)	296	1	4538954
13247	12.6	1.9	0.9	chrX	132445802	132452124	(23588771)	C	L1PA8	LINE/L1	(6)	6481	9	4539363
684	14.8	0.0	0.0	chrX	133999898	133999998	(22040897)	C	AluSz6	SINE/Alu	(0)	312	212	4541925
24795	4.9	0.2	0.1	chrX	134044164	134050309	(21990586)	C	L1PA4	LINE/L1	(2)	6153	1	4542026
10446	4.7	0.5	2.7	chrX	134285344	134286737	(21754158)	C	SVA_B	Retroposon/SVA	(2)	1381	19	4542395
299	33.0	0.0	3.7	chrX	136598629	136598735	(19442160)	+	L3	LINE/CR1	3993	4095	(4)	4546256
201	27.5	10.7	6.8	chrX	136598890	136599006	(19441889)	+	MIR1_Amn	SINE/MIR	109	230	(0)	4546257
2126	11.5	0.7	1.7	chrX	136937401	136937696	(19103199)	C	AluSx	SINE/Alu	(19)	293	1	4546917
617	32.2	5.3	6.1	chrX	136937697	136937748	(19103147)	C	MIR	SINE/MIR	(215)	47	4	4546915
313	24.3	5.3	0.9	chrX	136937802	136937909	(19102986)	C	L1MC5a	LINE/L1	(2219)	558	446	4546918
19948	10.5	1.0	2.1	chrX	138040363	138042211	(17998684)	+	L1PA14	LINE/L1	2026	3873	(2458)	4548777
2289	9.8	2.3	0.0	chrX	138042212	138042508	(17998387)	+	AluSp	SINE/Alu	2	305	(8)	4548778
24095	9.2	1.3	0.8	chrX	139958610	139965093	(16075802)	+	L1PA8	LINE/L1	6	6487	(0)	4551468
13	17.2	4.9	2.3	chrX	140091570	140091610	(15949285)	+	(CGCG)n	Simple_repeat	1	43	(0)	4551700
43	28.4	1.7	3.4	chrX	140091612	140091784	(15949111)	+	GA-rich	Low_complexity	1	176	(0)	4551701
588	30.9	3.3	1.3	chrX	140138449	140138684	(15902211)	C	MIRb	SINE/MIR	(0)	268	28	4551769
213	19.6	9.7	0.0	chrX	140138691	140138746	(15902149)	+	L2b	LINE/L2	3313	3374	(1)	4551770
2797	11.9	3.0	0.9	chrX	141002791	141003240	(15037655)	C	LTR46	LTR/ERV1	(0)	460	1	4553136
1287	14.7	3.8	3.5	chrX	146865197	146865457	(9175438)	C	MER4-int	LTR/ERV1	(5573)	1185	924	4561054
3910	14.8	1.4	2.9	chrX	146865480	146865858	(9175037)	C	MER4-int	LTR/ERV1	(5912)	846	473	4561054
915	19.4	12.4	0.0	chrX	149386718	149386908	(6653987)	+	MER20	DNA/hAT-Charlie	1	218	(1)	4564554
4399	23.0	10.7	6.9	chrX	149386909	149386963	(6653932)	+	L1MEc	LINE/L1	603	640	(5760)	4564553
2062	17.1	0.0	1.6	chrX	149386964	149387278	(6653617)	+	AluJr	SINE/Alu	3	312	(0)	4564555
4399	23.0	10.7	6.9	chrX	149387279	149388506	(6652389)	+	L1MEc	LINE/L1	641	1927	(4473)	4564553
280	19.4	6.9	1.5	chrX	150587772	150587839	(5453056)	+	MER20B	DNA/hAT-Charlie	2	73	(710)	4566146
860	17.4	4.9	1.5	chrX	150587850	150588048	(5452847)	+	MER20B	DNA/hAT-Charlie	578	783	(0)	4566147
12	23.4	7.5	3.5	chrX	153474769	153474848	(2566047)	+	(CGCGGCA)n	Simple_repeat	1	86	(0)	4570320
13	11.9	13.0	0.0	chrX	153878838	153878883	(2162012)	+	(CCCAGCT)n	Simple_repeat	1	52	(0)	4570872
18	15.9	0.0	0.0	chrX	153955107	153955141	(2085754)	+	(TGG)n	Simple_repeat	1	35	(0)	4570987
17	31.3	2.0	3.9	chrX	154397618	154397718	(1643177)	+	G-rich	Low_complexity	1	103	(0)	4571791
21	16.9	8.6	4.0	chrX	154458289	154458401	(1582494)	+	(GGCGGC)n	Simple_repeat	1	118	(0)	4571897
15	21.4	3.0	5.8	chrX	155071159	155071225	(969670)	+	(CCTCCGC)n	Simple_repeat	1	69	(0)	4572850
9255	18.3	2.2	1.6	chrY	3407288	3409654	(53817761)	C	HUERS-P3-int	LTR/ERV1	(5635)	3284	752	4580261
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
2044	18.7	9.9	3.3	chrY	11129546	11130893	(46096522)	C	SATR1	Satellite	(3)	2704	489	4588898
980	20.8	6.4	12.0	chrY	11130894	11131787	(46095628)	+	SATR2	Satellite	1	843	(1)	4588899
2044	18.7	9.9	3.3	chrY	11131788	11132082	(46095333)	C	SATR1	Satellite	(3)	488	1	4588898
2312	8.9	0.0	0.0	chrY	11215344	11215635	(46011780)	C	AluSg	SINE/Alu	(18)	292	1	4588988
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
249	31.4	10.8	10.1	chrY	11287602	11287738	(45939677)	C	LTR48	LTR/ERV1	(13)	631	502	4589062
27	0.0	3.3	0.0	chrY	11287739	11287768	(45939647)	+	(AAAAC)n	Simple_repeat	1	31	(0)	4589063
307	25.3	11.2	7.7	chrY	11287769	11288013	(45939402)	C	LTR48	LTR/ERV1	(143)	501	189	4589062