14	18.7	0.0	6.2	chr1	1335054	1335101	(247621321)	+	(CCAGCA)n	Simple_repeat	1	48	(0)	1600
317	29.9	5.8	8.9	chr1	6209589	6209768	(242746654)	C	L2b	LINE/L2	(84)	3291	3118	7838
310	34.6	0.6	5.3	chr1	6246494	6246664	(242709758)	C	MamTip1	DNA/hAT-Tip100	(39)	228	66	7901
241	30.6	8.4	0.0	chr1	8317627	8317724	(240638698)	+	L2a	LINE/L2	3286	3392	(34)	11456
253	5.1	0.0	0.0	chr1	8317840	8317878	(240638544)	+	ORSL	DNA/hAT-Tip100	67	105	(170)	11460
292	31.9	4.8	2.5	chr1	9111016	9111137	(239845285)	+	MIRb	SINE/MIR	120	244	(24)	12960
13	13.7	0.0	0.0	chr1	9201744	9201768	(239754654)	+	(CCCT)n	Simple_repeat	1	25	(0)	13138
39	11.9	0.0	0.0	chr1	10794135	10794199	(238162223)	+	(GT)n	Simple_repeat	1	65	(0)	16349
453	31.3	6.2	5.1	chr1	11602093	11602348	(237354074)	C	L2b	LINE/L2	(1)	3374	3116	18032
329	24.4	12.2	1.7	chr1	15186540	15186656	(233769766)	+	MIRb	SINE/MIR	99	229	(39)	24737
280	31.0	11.1	2.5	chr1	15186650	15186887	(233769535)	C	L2	LINE/L2	(475)	2944	2684	24738
339	24.6	12.7	2.1	chr1	16980880	16981020	(231975402)	C	MIRc	SINE/MIR	(91)	177	20	28406
17	12.4	2.9	0.0	chr1	19338789	19338823	(229617599)	+	(TTTCT)n	Simple_repeat	1	36	(0)	33473
236	25.9	16.8	6.1	chr1	19353577	19353724	(229602698)	+	L2	LINE/L2	2684	2850	(569)	33490
12	18.9	7.1	0.0	chr1	20483905	20483946	(228472476)	+	(CCAGCCT)n	Simple_repeat	1	45	(0)	35879
11	20.7	0.0	2.9	chr1	21289985	21290019	(227666403)	+	(GGCAGC)n	Simple_repeat	1	35	(0)	37581
16	17.5	6.7	0.0	chr1	21290222	21290266	(227666156)	+	(GCC)n	Simple_repeat	1	48	(0)	37582
1940	8.0	11.8	0.0	chr1	21658942	21659204	(227297218)	C	AluSp	SINE/Alu	(15)	298	1	38409
200	27.9	4.8	4.8	chr1	21659612	21659694	(227296728)	C	MIRc	SINE/MIR	(64)	204	122	38410
484	32.1	3.6	10.6	chr1	22556687	22557101	(226399321)	C	L2	LINE/L2	(513)	2906	2522	40383
863	18.4	4.3	3.8	chr1	24725230	24725415	(224231007)	C	MIR	SINE/MIR	(74)	188	2	45578
2020	13.3	0.0	0.0	chr1	24725728	24726006	(224230416)	+	AluSz6	SINE/Alu	5	283	(29)	45579
26	6.3	0.0	0.0	chr1	24726007	24726040	(224230382)	+	(AAC)n	Simple_repeat	1	34	(0)	45580
762	15.1	0.0	0.8	chr1	24847790	24847908	(224108514)	C	AluJr	SINE/Alu	(194)	118	1	45851
2228	9.3	0.7	0.0	chr1	26408260	26408548	(222547874)	+	AluSz	SINE/Alu	1	291	(21)	49285
19	8.2	0.0	0.0	chr1	26993578	26993603	(221962819)	+	(G)n	Simple_repeat	1	26	(0)	50663
18	19.9	0.0	0.0	chr1	26993890	26993930	(221962492)	+	(CCCCGA)n	Simple_repeat	1	41	(0)	50664
384	20.8	12.2	5.6	chr1	27350194	27350300	(221606122)	+	MIRb	SINE/MIR	119	233	(35)	51563
18	16.6	2.0	3.9	chr1	32361673	32361723	(216594699)	+	G-rich	Low_complexity	1	52	(0)	62708
14	16.3	8.0	1.9	chr1	32742147	32742196	(216214226)	+	(AAGGCC)n	Simple_repeat	1	54	(0)	63631
12	11.1	0.0	8.6	chr1	32973105	32973139	(215983283)	+	(GCCCCC)n	Simple_repeat	1	35	(0)	64134
12	16.5	0.0	0.0	chr1	32973206	32973232	(215983190)	+	G-rich	Low_complexity	1	27	(0)	64135
14	27.3	0.0	3.6	chr1	33181241	33181328	(215775094)	+	G-rich	Low_complexity	1	84	(0)	64626
411	27.5	8.7	7.7	chr1	34598063	34598290	(214358132)	+	LTR88b	LTR/Gypsy?	631	851	(11)	67054
14	16.4	3.1	9.0	chr1	36088871	36088935	(212867487)	+	(GCGGCA)n	Simple_repeat	1	67	(0)	70109
19	31.7	1.5	0.0	chr1	36924864	36924929	(212031493)	+	(CA)n	Simple_repeat	1	67	(0)	71801
11	14.9	4.9	4.7	chr1	37764624	37764664	(211191758)	+	(CTCCAC)n	Simple_repeat	1	43	(0)	73397
275	32.6	2.1	0.0	chr1	38076052	38076146	(210880276)	+	MIR3	SINE/MIR	82	178	(30)	74035
269	34.0	3.6	0.0	chr1	38076336	38076441	(210879981)	C	MIRb	SINE/MIR	(6)	262	153	74036
18	11.2	0.0	0.0	chr1	38270715	38270744	(210685678)	+	(GCA)n	Simple_repeat	1	30	(0)	74401
15	7.8	0.0	3.5	chr1	38285974	38286002	(210670420)	+	(AGGGG)n	Simple_repeat	1	29	(0)	74435
420	32.5	8.4	6.7	chr1	38432284	38432310	(210524112)	+	L3	LINE/CR1	3725	3751	(348)	74653
2353	11.6	0.0	0.0	chr1	38432311	38432620	(210523802)	+	AluSz	SINE/Alu	1	310	(2)	74654
15	22.5	0.0	0.0	chr1	39922711	39922747	(209033675)	+	(TTCA)n	Simple_repeat	1	37	(0)	77708
11	24.6	0.0	2.5	chr1	42740060	42740099	(206216323)	+	(CCAGGAC)n	Simple_repeat	1	40	(0)	83068
29	19.0	0.0	3.0	chr1	44405366	44405438	(204550984)	+	(GCC)n	Simple_repeat	1	70	(0)	85973
12	11.5	3.3	3.2	chr1	44417620	44417649	(204538773)	+	(CCTC)n	Simple_repeat	1	31	(0)	85980
446	33.0	3.4	1.7	chr1	44592627	44592847	(204363575)	C	MIRb	SINE/MIR	(36)	232	3	86334
23	15.8	2.0	0.0	chr1	47997587	47997635	(200958787)	+	(CGCT)n	Simple_repeat	1	50	(0)	92702
20	14.5	0.0	5.9	chr1	47997697	47997748	(200958674)	+	(CCTCC)n	Simple_repeat	1	48	(0)	92703
13	22.5	2.0	3.9	chr1	52602415	52602464	(196353958)	+	(GGCTGC)n	Simple_repeat	1	51	(0)	101225
184	36.2	10.2	0.6	chr1	52632756	52632933	(196323489)	+	MIRb	SINE/MIR	2	198	(70)	101303
859	28.7	10.0	4.4	chr1	52697872	52697999	(196258423)	+	L2a	LINE/L2	3247	3371	(55)	101487
432	22.6	8.2	2.4	chr1	52921869	52921995	(196034427)	+	MIRb	SINE/MIR	88	222	(46)	102087
257	36.2	8.2	4.0	chr1	53470553	53470949	(195485473)	+	L2b	LINE/L2	2961	3375	(0)	103144
348	29.4	6.9	4.5	chr1	54342595	54342792	(194613630)	+	MIRc	SINE/MIR	2	222	(46)	104895
202	33.9	3.8	1.6	chr1	56578168	56578296	(192378126)	+	MIRb	SINE/MIR	117	248	(20)	109119
214	16.7	6.7	0.0	chr1	56578267	56578308	(192378114)	+	L2c	LINE/L2	3334	3378	(9)	109120
17498	15.9	3.8	1.0	chr1	57682374	57684946	(191271476)	+	L1PA16	LINE/L1	7	2672	(3811)	111324
1146	16.9	6.9	0.0	chr1	58162870	58163070	(190793352)	+	MER20	DNA/hAT-Charlie	1	216	(3)	112311
529	23.5	16.6	0.6	chr1	58163109	58163275	(190793147)	C	LTR50	LTR/ERVL	(596)	199	1	112312
19	10.4	0.0	0.0	chr1	58577094	58577124	(190379298)	+	(CAG)n	Simple_repeat	1	31	(0)	113109
19	32.5	0.0	0.0	chr1	58782402	58782467	(190173955)	+	(CTG)n	Simple_repeat	1	66	(0)	113504
19	25.6	2.9	5.7	chr1	58782585	58782687	(190173735)	+	(GCTGCC)n	Simple_repeat	1	106	(0)	113505
2268	11.9	0.0	0.0	chr1	59814046	59814356	(189142066)	C	AluSx	SINE/Alu	(1)	311	1	115493
14	15.5	0.0	9.6	chr1	62195023	62195074	(186761348)	+	G-rich	Low_complexity	1	52	(0)	119697
28	20.4	2.4	3.5	chr1	62688241	62688324	(186268098)	+	(GGC)n	Simple_repeat	1	86	(0)	120631
11703	11.2	0.3	1.1	chr1	63830673	63832316	(185124106)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	122790
13	9.8	0.0	0.0	chr1	65002691	65002712	(183953710)	+	(CGG)n	Simple_repeat	1	22	(0)	124874
19	0.0	0.0	0.0	chr1	65003014	65003034	(183953388)	+	(T)n	Simple_repeat	1	21	(0)	124875
19	6.2	2.8	2.7	chr1	68497219	68497254	(180459168)	+	(GCTGG)n	Simple_repeat	1	37	(0)	130753
18952	15.5	2.7	2.3	chr1	70740017	70745876	(178210546)	C	L1PA16	LINE/L1	(0)	6935	998	133903
18	24.2	0.0	3.5	chr1	77683479	77683535	(171272887)	+	(GGC)n	Simple_repeat	1	57	(0)	143294
12	16.9	0.0	0.0	chr1	84620578	84620604	(164335818)	+	(CTTC)n	Simple_repeat	1	27	(0)	152805
20	0.0	0.0	0.0	chr1	85464590	85464611	(163491811)	+	(AC)n	Simple_repeat	1	22	(0)	154198
15	3.7	7.1	0.0	chr1	88992551	88992578	(159963844)	+	(GCGCC)n	Simple_repeat	1	30	(0)	159336
27	0.0	0.0	0.0	chr1	93346087	93346112	(155610310)	+	(GCAGCG)n	Simple_repeat	1	26	(0)	166155
23	15.9	2.0	1.9	chr1	93346157	93346207	(155610215)	+	(GGC)n	Simple_repeat	1	52	(0)	166156
362	32.9	10.1	10.1	chr1	94012140	94012603	(154943819)	+	L2c	LINE/L2	2917	3380	(7)	167156
19	9.8	0.0	2.9	chr1	94418422	94418456	(154537966)	+	(GCC)n	Simple_repeat	1	35	(0)	167758
13	5.3	0.0	0.0	chr1	99970237	99970256	(148986166)	+	(GGA)n	Simple_repeat	1	20	(0)	175723
201	30.0	4.3	6.2	chr1	100037817	100037912	(148918510)	+	MIRb	SINE/MIR	96	189	(79)	175849
22308	8.6	1.1	2.9	chr1	100199603	100206088	(148750334)	+	L1PA7	LINE/L1	8	6469	(0)	176148
15	20.3	4.4	0.0	chr1	108661127	108661171	(140295251)	+	(CCGCGC)n	Simple_repeat	1	47	(0)	187089
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
12	24.1	0.0	0.0	chr1	153678256	153678289	(95278133)	+	(CACA)n	Simple_repeat	1	34	(0)	224528
16	12.9	4.3	4.2	chr1	154405522	154405567	(94550855)	+	(CCCGC)n	Simple_repeat	1	48	(0)	226114
13	8.7	4.0	0.0	chr1	154502729	154502753	(94453669)	+	(CCACT)n	Simple_repeat	1	26	(0)	226305
17	17.9	2.2	2.1	chr1	154558757	154558802	(94397620)	+	(CCTCCT)n	Simple_repeat	1	47	(0)	226415
13	21.1	2.6	0.0	chr1	155017383	155017420	(93939002)	+	(CCCCT)n	Simple_repeat	1	39	(0)	227201
17	23.2	0.0	2.1	chr1	155017543	155017589	(93938833)	+	(GCC)n	Simple_repeat	1	47	(0)	227202
474	26.3	3.3	1.7	chr1	155125809	155125928	(93830494)	C	L2a	LINE/L2	(1)	3425	3304	227409
22	27.7	4.9	0.0	chr1	155126503	155126584	(93829838)	+	(CA)n	Simple_repeat	1	86	(0)	227410
16	13.3	0.0	5.4	chr1	155688680	155688722	(93267700)	+	(CCT)n	Simple_repeat	1	40	(0)	228558
13	22.3	0.0	2.6	chr1	156876582	156876620	(92079802)	+	(CCTGGC)n	Simple_repeat	1	39	(0)	230913
239	27.5	2.8	0.0	chr1	156876681	156876749	(92079673)	C	L2c	LINE/L2	(59)	3328	3258	230914
23	16.0	3.5	1.7	chr1	157046168	157046260	(91910162)	+	(CCGCCA)n	Simple_repeat	1	94	(0)	231178
14	21.3	2.2	2.2	chr1	157046335	157046379	(91910043)	+	(CCCGTG)n	Simple_repeat	1	46	(0)	231179
229	29.2	5.9	1.0	chr1	158087313	158087409	(90869013)	+	MIRb	SINE/MIR	161	262	(6)	232653
19	4.0	0.0	0.0	chr1	160284725	160284750	(88671672)	+	(TGC)n	Simple_repeat	1	26	(0)	235523
24	11.2	0.0	0.0	chr1	160410676	160410715	(88545707)	+	(ACAC)n	Simple_repeat	1	40	(0)	235714
591	35.4	5.8	0.0	chr1	162215496	162215769	(86740653)	C	LTR88c	LTR/Gypsy?	(561)	301	11	238759
370	22.2	0.0	1.2	chr1	175887938	175888019	(73068403)	C	MER5A	DNA/hAT-Charlie	(0)	189	109	259395
14	21.1	0.0	6.1	chr1	178094013	178094061	(70862361)	+	(GGC)n	Simple_repeat	1	49	(0)	262570
14	15.8	0.0	5.1	chr1	178094065	178094103	(70862319)	+	(CCCAG)n	Simple_repeat	1	39	(0)	262571
14	19.3	6.4	0.0	chr1	178094104	178094109	(70862313)	+	(CCCCAG)n	Simple_repeat	3	50	(0)	262572
14	23.1	1.9	3.6	chr1	180229384	180229437	(68726985)	+	G-rich	Low_complexity	1	55	(0)	266081
21	16.0	1.6	6.2	chr1	180229723	180229785	(68726637)	+	(GCCCC)n	Simple_repeat	1	64	(0)	266082
13	14.2	3.2	0.0	chr1	181180790	181180820	(67775602)	+	(GGTGG)n	Simple_repeat	1	32	(0)	267609
310	32.3	19.1	5.2	chr1	182028926	182029560	(66926862)	+	L2b	LINE/L2	2539	3298	(77)	268744
44	2.4	0.0	0.0	chr1	193588275	193588316	(55368106)	+	(AC)n	Simple_repeat	1	42	(0)	285065
329	28.6	3.8	7.2	chr1	201309567	201309732	(47646690)	C	MamRTE1	LINE/RTE-BovB	(1)	3811	3652	295814
450	25.3	10.6	0.5	chr1	201309738	201309909	(47646513)	+	MER20B	DNA/hAT-Charlie	32	219	(0)	295815
11	14.4	7.5	2.3	chr1	201399325	201399364	(47557058)	+	(GGCCGCC)n	Simple_repeat	1	43	(0)	295946
15	26.2	5.1	0.0	chr1	201982924	201982982	(46973440)	+	(GGC)n	Simple_repeat	1	62	(0)	296983
16	23.6	1.7	3.4	chr1	204073047	204073104	(44883318)	+	(CCCT)n	Simple_repeat	1	59	(0)	300927
11	16.4	5.9	0.0	chr1	204073214	204073247	(44883175)	+	(GAGCTCA)n	Simple_repeat	1	36	(0)	300928
39	14.6	4.3	2.0	chr1	204129248	204129341	(44827081)	+	(CCTCCGC)n	Simple_repeat	1	98	(0)	301045
16	12.3	10.9	1.6	chr1	205301735	205301758	(43654664)	+	(AGCAGG)n	Simple_repeat	1	74	(0)	303177
31	0.0	0.0	3.0	chr1	205504601	205504633	(43451789)	+	(TCC)n	Simple_repeat	1	33	(0)	303573
797	26.6	8.3	4.8	chr1	210373543	210373878	(38582544)	C	LTR82A	LTR/ERVL	(58)	814	466	311067
730	9.9	1.8	1.8	chr1	210374156	210374268	(38582154)	C	U5	snRNA	(2)	114	2	311068
9291	7.9	14.5	0.4	chr1	211889365	211890718	(37065704)	+	LTR12C	LTR/ERV1	3	1579	(0)	313558
12	27.1	2.3	0.0	chr1	212916960	212917003	(36039419)	+	(ACCCT)n	Simple_repeat	1	45	(0)	315426
11	20.1	2.9	0.0	chr1	220690463	220690496	(28265926)	+	G-rich	Low_complexity	1	35	(0)	326595
2348	7.2	0.0	5.6	chr1	220787711	220788030	(28168392)	+	AluSx	SINE/Alu	4	305	(7)	326740
327	32.8	10.8	0.8	chr1	225474698	225474907	(23481515)	C	L3b	LINE/CR1	(375)	3724	3571	334027
255	30.2	10.5	0.0	chr1	225474923	225475041	(23481381)	+	MIR	SINE/MIR	27	159	(103)	334028
1061	5.5	0.0	0.0	chr1	225911595	225911721	(23044701)	+	AluSc	SINE/Alu	2	128	(181)	334798
189	29.0	3.7	0.0	chr1	226703765	226703851	(22252571)	+	MIRc	SINE/MIR	56	152	(116)	336313
226	29.0	0.0	0.0	chr1	228849356	228849424	(20106998)	C	MIRb	SINE/MIR	(38)	230	162	339290
201	24.5	5.8	2.0	chr1	230422467	230422516	(18533906)	+	L2	LINE/L2	95	146	(3273)	341847
2184	16.6	0.5	7.6	chr1	232140828	232141111	(16815311)	+	L1MB3	LINE/L1	5742	6019	(164)	344559
1894	11.2	0.7	1.8	chr1	232141112	232141389	(16815033)	+	AluSq2	SINE/Alu	39	313	(0)	344560
2184	16.6	0.5	7.6	chr1	232141390	232141579	(16814843)	+	L1MB3	LINE/L1	6020	6182	(1)	344559
21	16.6	0.0	0.0	chr1	232805548	232805588	(16150834)	+	GA-rich	Low_complexity	1	41	(0)	345472
13	13.1	4.1	7.8	chr1	233328323	233328376	(15628046)	+	(CCGC)n	Simple_repeat	1	51	(0)	346215
12	25.8	3.1	4.5	chr1	233328482	233328546	(15627876)	+	(GCGGCGC)n	Simple_repeat	1	67	(0)	346216
1119	25.2	11.9	4.9	chr1	239124632	239125082	(9831340)	C	L2a	LINE/L2	(5)	3421	2935	355646
184	28.2	12.7	3.9	chr1	239125115	239125243	(9831179)	C	L2a	LINE/L2	(913)	2506	2365	355646
832	19.0	0.0	0.0	chr1	239125349	239125490	(9830932)	+	FAM	SINE/Alu	36	177	(8)	355647
35	8.8	0.0	0.0	chr1	239706618	239706665	(9249757)	+	(AC)n	Simple_repeat	1	48	(0)	356538
12	51.6	0.0	0.0	chr1	239706674	239706815	(9249607)	+	(ACAC)n	Simple_repeat	1	142	(0)	356539
523	22.9	11.1	1.3	chr1	243855661	243855815	(5100607)	C	MER45A	DNA/hAT-Tip100	(0)	178	7	363183
411	30.6	19.1	5.9	chr1	243855962	243856486	(5099936)	C	LTR78	LTR/ERV1	(691)	613	3	363182
2544	20.9	6.5	4.8	chr1	247375541	247376137	(1580285)	+	LTR8A	LTR/ERV1	125	727	(0)	369051
1595	19.6	9.4	10.5	chr10	394934	395436	(133401986)	+	L1MA7	LINE/L1	5789	6285	(6)	371502
12	19.9	9.6	0.0	chr10	1048949	1049000	(132748422)	+	(CCAGCG)n	Simple_repeat	1	57	(0)	372219
16	17.6	6.6	3.1	chr10	3067478	3067538	(130729884)	+	(GGCGCG)n	Simple_repeat	1	65	(0)	374579
13	9.2	2.4	9.3	chr10	6163681	6163722	(127633700)	+	G-rich	Low_complexity	1	43	(0)	379017
711	9.9	0.0	2.2	chr10	14878087	14878177	(118919245)	+	AluJb	SINE/Alu	200	288	(24)	393216
16	7.8	0.0	3.5	chr10	21173846	21173874	(112623548)	+	(CGG)n	Simple_repeat	1	29	(0)	403076
12	18.4	0.0	9.6	chr10	21496082	21496133	(112301289)	+	(CCCT)n	Simple_repeat	1	52	(0)	403844
18	12.4	2.9	0.0	chr10	27252554	27252588	(106544834)	+	(GCC)n	Simple_repeat	1	36	(0)	413154
18	3.9	7.4	0.0	chr10	27252597	27252625	(106544797)	+	(GT)n	Simple_repeat	1	31	(0)	413155
13	13.5	4.3	6.2	chr10	27252856	27252901	(106544521)	+	(GCGCCGG)n	Simple_repeat	1	48	(0)	413156
13	18.5	7.0	0.0	chr10	27745612	27745654	(106051768)	+	G-rich	Low_complexity	1	46	(0)	413919
748	24.3	6.4	2.2	chr10	32003958	32004180	(101793242)	C	LTR41B	LTR/ERVL	(113)	645	413	421154
314	26.7	18.3	2.5	chr10	32004365	32004602	(101792820)	C	LTR41B	LTR/ERVL	(423)	335	52	421154
12471	10.7	1.7	2.7	chr10	44232714	44234189	(89563233)	C	L1PA8A	LINE/L1	(4935)	1548	56	434598
550	30.2	11.1	1.9	chr10	44311282	44311706	(89485716)	C	L3	LINE/CR1	(77)	4022	3554	434690
12	24.7	4.4	4.2	chr10	46556178	46556245	(87241177)	+	G-rich	Low_complexity	1	71	(0)	437854
13	20.3	0.0	4.7	chr10	62818928	62818970	(70978452)	+	G-rich	Low_complexity	1	43	(0)	460647
13	5.2	0.0	0.0	chr10	70145987	70146006	(63651416)	+	(CTC)n	Simple_repeat	1	20	(0)	472841
299	37.0	4.3	0.0	chr10	71396079	71396232	(62401190)	+	L3	LINE/CR1	3937	4097	(2)	475182
130	36.2	3.3	2.9	chr10	78139176	78139269	(55658153)	+	(ATGTGT)n	Simple_repeat	6	99	(0)	487252
14	13.1	0.0	0.0	chr10	78139416	78139441	(55657981)	+	(CTCC)n	Simple_repeat	1	26	(0)	487253
18	24.2	4.2	5.0	chr10	86377301	86377396	(47420026)	+	(CGCAGG)n	Simple_repeat	1	100	(0)	499385
961	23.1	6.0	0.8	chr10	86377574	86377809	(47419613)	C	MIR	SINE/MIR	(3)	259	11	499386
583	28.6	5.5	9.0	chr10	90925440	90925850	(42871572)	C	LTR82B	LTR/ERVL	(291)	539	144	506533
545	28.2	0.6	1.1	chr10	90925909	90926087	(42871335)	+	MER5B	DNA/hAT-Charlie	1	178	(0)	506535
6304	15.8	2.1	8.1	chr10	91744962	91745444	(42051978)	+	L1M3f	LINE/L1	1494	1947	(4618)	507786
1511	20.9	4.0	1.0	chr10	91745445	91745736	(42051686)	+	AluJo	SINE/Alu	2	302	(10)	507789
19	21.2	5.4	2.6	chr10	91799079	91799152	(41998270)	+	(TTTTGG)n	Simple_repeat	1	78	(0)	507865
250	23.1	14.1	2.8	chr10	91799293	91799399	(41998023)	+	UCON132b	DNA/hAT-Tip100	26	146	(2)	507866
21	32.4	1.3	0.0	chr10	92692132	92692207	(41105215)	+	(TG)n	Simple_repeat	1	77	(0)	509680
469	24.4	18.6	1.0	chr10	93445192	93445390	(40352032)	+	MIR	SINE/MIR	2	243	(19)	511124
3509	6.0	0.0	0.7	chr10	95231193	95231643	(38565779)	+	LTR7	LTR/ERV1	1	448	(2)	513935
3030	17.8	8.8	9.2	chr10	96340591	96341529	(37455893)	C	L1MEc	LINE/L1	(5174)	1226	292	515795
15	4.8	0.0	0.0	chr10	96513616	96513649	(37283773)	+	(GCA)n	Simple_repeat	1	34	(0)	516113
12	15.7	2.6	5.0	chr10	96720577	96720615	(37076807)	+	(GCCCGCG)n	Simple_repeat	1	40	(0)	516504
15	14.0	4.9	2.3	chr10	96720767	96720807	(37076615)	+	(GAGGTG)n	Simple_repeat	1	43	(0)	516505
12	18.1	3.1	0.0	chr10	96720925	96720956	(37076466)	+	GA-rich	Low_complexity	1	33	(0)	516506
1590	13.7	3.6	7.0	chr10	97335203	97335515	(36461907)	C	AluJo	SINE/Alu	(10)	302	1	517744
467	35.5	3.1	0.0	chr10	97446519	97446673	(36350749)	C	MIR3	SINE/MIR	(21)	187	28	518010
437	28.9	3.8	0.7	chr10	97497898	97498050	(36299372)	+	MIRc	SINE/MIR	3	160	(108)	518102
224	27.9	12.7	1.0	chr10	97687725	97687820	(36109602)	+	MIR	SINE/MIR	5	114	(154)	518502
25	23.3	2.8	5.5	chr10	97713845	97713950	(36083472)	+	(CGC)n	Simple_repeat	1	109	(0)	518571
15	0.0	0.0	0.0	chr10	97771188	97771204	(36026218)	+	(GT)n	Simple_repeat	1	17	(0)	518686
13	21.3	2.1	4.2	chr10	97771276	97771322	(36026100)	+	(GCG)n	Simple_repeat	1	48	(0)	518687
344	27.7	11.9	2.1	chr10	98309552	98309695	(35487727)	+	MIR3	SINE/MIR	3	162	(46)	519693
15	17.0	6.2	2.0	chr10	101694328	101694375	(32103047)	+	G-rich	Low_complexity	1	51	(0)	525476
16	24.3	2.7	5.2	chr10	102120412	102120486	(31676936)	+	(CGCTCC)n	Simple_repeat	1	77	(0)	526331
13	31.4	1.4	2.8	chr10	102120569	102120638	(31676784)	+	G-rich	Low_complexity	1	71	(0)	526332
15	13.7	7.5	0.0	chr10	102120787	102120826	(31676596)	+	(GAGCCG)n	Simple_repeat	1	43	(0)	526333
12	21.9	3.9	3.8	chr10	102231680	102231730	(31565692)	+	(GCT)n	Simple_repeat	1	53	(0)	526556
334	32.5	6.1	5.5	chr10	102399784	102399946	(31397476)	+	MIR	SINE/MIR	27	190	(72)	526858
19	4.3	0.0	0.0	chr10	102645212	102645235	(31152187)	+	(CA)n	Simple_repeat	1	24	(0)	527309
13	28.6	1.8	1.7	chr10	103368202	103368258	(30429164)	+	(CGCCGG)n	Simple_repeat	1	58	(0)	528833
257	29.0	0.0	0.0	chr10	103599107	103599168	(30198254)	+	MIR3	SINE/MIR	64	125	(83)	529283
591	30.0	15.5	1.8	chr10	103758217	103758610	(30038812)	+	L2a	LINE/L2	2969	3426	(0)	529578
237	28.4	2.8	0.5	chr10	104824612	104824692	(28972730)	C	L2a	LINE/L2	(39)	3387	3281	531350
279	29.3	15.6	3.6	chr10	110496172	110496447	(23300975)	+	L2b	LINE/L2	3048	3362	(13)	539643
465	20.1	3.9	2.8	chr10	110497263	110497403	(23300019)	C	L1MC5	LINE/L1	(14)	9290	9163	539646
339	31.1	8.0	8.5	chr10	116120615	116121129	(17676293)	+	MamGypLTR3	LTR/Gypsy	436	946	(35)	548312
553	24.3	9.3	0.0	chr10	120942677	120942812	(12854610)	C	MER5A	DNA/hAT-Charlie	(32)	157	8	556399
236	24.7	5.2	0.0	chr10	120942858	120942930	(12854492)	+	MIR3	SINE/MIR	64	140	(68)	556400
298	27.9	10.8	0.0	chr10	120979385	120979524	(12817898)	C	MER5A1	DNA/hAT-Charlie	(4)	162	6	556459
15	4.1	4.0	0.0	chr10	120979824	120979848	(12817574)	+	(CCCGC)n	Simple_repeat	1	26	(0)	556460
220	22.5	16.5	5.9	chr10	122648952	122649069	(11148353)	+	MamGypsy2-LTR	LTR/Gypsy	33	165	(18)	559144
17	13.8	5.0	0.0	chr10	124791785	124791824	(9005598)	+	(ACCGCC)n	Simple_repeat	1	42	(0)	562470
180	24.1	4.4	6.5	chr10	125718957	125719049	(8078373)	+	MER5A	DNA/hAT-Charlie	34	124	(65)	563920
944	20.8	6.3	9.2	chr10	128035248	128035495	(5761927)	+	BLACKJACK	DNA/hAT-Blackjack	2739	2961	(8)	566945
297	19.7	3.2	0.0	chr10	131899980	131900040	(1897382)	+	MER47C	DNA/TcMar-Tigger	3	65	(32)	571057
253	20.5	14.4	1.2	chr10	131900030	131900113	(1897309)	+	Tigger5b	DNA/TcMar-Tigger	374	470	(2)	571058
1379	16.6	1.7	0.4	chr10	131900258	131900492	(1896930)	+	AluJb	SINE/Alu	39	276	(36)	571059
191	27.7	0.0	0.0	chr10	133159516	133159562	(637860)	C	L2b	LINE/L2	(2)	3373	3327	572210
100	38.0	3.6	4.8	chr10	133177142	133178224	(619198)	+	(TG)n	Simple_repeat	1	1122	(0)	572230
15	17.1	0.0	0.0	chr10	133378646	133378678	(418744)	+	(CACGCG)n	Simple_repeat	1	33	(0)	572460
19	28.2	4.4	1.1	chr11	705981	706071	(134380551)	+	G-rich	Low_complexity	1	95	(0)	573793
13	25.9	3.4	3.3	chr11	2270169	2270228	(132816394)	+	(CGC)n	Simple_repeat	1	60	(0)	575608
26	3.4	0.0	0.0	chr11	2862320	2862349	(132224273)	+	(GGCCC)n	Simple_repeat	1	30	(0)	576222
19	14.2	4.1	2.0	chr11	2862422	2862470	(132224152)	+	G-rich	Low_complexity	1	51	(0)	576223
13	32.0	0.0	3.1	chr11	2862513	2862577	(132224045)	+	(CCGCGCC)n	Simple_repeat	1	65	(0)	576224
12	16.8	0.0	5.4	chr11	2862781	2862817	(132223805)	+	G-rich	Low_complexity	1	37	(0)	576225
19	11.2	5.8	3.6	chr11	2885520	2885571	(132201051)	+	GA-rich	Low_complexity	1	55	(0)	576274
20	25.5	2.6	6.7	chr11	2886194	2886309	(132200313)	+	(GGCCC)n	Simple_repeat	1	119	(0)	576278
35	17.9	3.9	3.8	chr11	2892561	2892662	(132193960)	+	(CCT)n	Simple_repeat	1	106	(0)	576289
380	31.4	16.6	4.1	chr11	8169152	8169668	(126916954)	+	L2	LINE/L2	2483	3077	(342)	583593
381	26.2	9.0	0.0	chr11	8688629	8688769	(126397853)	C	Charlie2a	DNA/hAT-Charlie	(1199)	1662	1508	584345
33	5.2	0.0	0.0	chr11	8964364	8964403	(126122219)	+	(GGCTCA)n	Simple_repeat	1	40	(0)	584803
2420	8.2	0.3	0.0	chr11	9378669	9378974	(125707648)	+	AluSp	SINE/Alu	1	307	(6)	585656
4920	12.9	3.8	8.6	chr11	9378975	9379760	(125706862)	+	LTR1A2	LTR/ERV1	93	837	(0)	585655
12	21.1	0.0	7.8	chr11	9664024	9664074	(125422548)	+	G-rich	Low_complexity	1	51	(0)	586301
15	18.1	0.0	0.0	chr11	13009382	13009414	(122077208)	+	(CGCAGC)n	Simple_repeat	1	33	(0)	591659
12	17.4	0.0	5.6	chr11	14381423	14381458	(120705164)	+	(GCCC)n	Simple_repeat	1	36	(0)	593805
14	24.0	0.0	0.0	chr11	14891684	14891722	(120194900)	+	(GGAGCA)n	Simple_repeat	1	39	(0)	594637
16	21.4	0.0	5.6	chr11	16925889	16925942	(118160680)	+	G-rich	Low_complexity	1	54	(0)	597709
15	24.2	5.2	0.0	chr11	17736388	17736445	(117350177)	+	(ACGGCG)n	Simple_repeat	1	61	(0)	599231
15	11.7	0.0	3.3	chr11	18105972	18106001	(116980621)	+	(CTC)n	Simple_repeat	1	30	(0)	599909
390	30.0	12.1	7.6	chr11	20000875	20001465	(115085157)	+	L2c	LINE/L2	2737	3382	(5)	603185
13	20.6	2.4	2.4	chr11	20363824	20363864	(114722758)	+	(GCG)n	Simple_repeat	1	42	(0)	603807
36	16.4	1.1	4.4	chr11	43547957	43548045	(91538577)	+	G-rich	Low_complexity	1	90	(0)	638644
20	15.5	5.9	0.0	chr11	45103352	45103402	(89983220)	+	GA-rich	Low_complexity	1	54	(0)	641508
410	21.4	9.3	3.3	chr11	45103430	45103550	(89983072)	+	MIRb	SINE/MIR	31	159	(109)	641509
216	31.0	6.3	2.2	chr11	45923240	45923392	(89163230)	+	MIR3	SINE/MIR	35	195	(35)	643030
278	26.9	5.7	1.5	chr11	45923606	45923699	(89162923)	+	MIRc	SINE/MIR	89	193	(75)	643031
31	0.0	3.0	0.0	chr11	47408554	47408586	(87678036)	+	(GGCCGGGC)n	Simple_repeat	1	34	(0)	645844
14	0.0	0.0	0.0	chr11	47408642	47408659	(87677963)	+	(CGC)n	Simple_repeat	1	18	(0)	645845
317	25.1	7.0	3.9	chr11	61567148	61567288	(73519334)	+	MIRc	SINE/MIR	44	198	(10)	660427
350	30.3	5.7	4.1	chr11	61776922	61777093	(73309529)	+	MIR3	SINE/MIR	1	175	(33)	660827
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
20	8.1	2.3	4.5	chr11	63671527	63671569	(71415053)	+	(CGAGG)n	Simple_repeat	1	44	(0)	664137
13	11.6	4.9	4.7	chr11	64185451	64185491	(70901131)	+	(GCCGGAG)n	Simple_repeat	1	43	(0)	665142
210	25.6	3.2	10.0	chr11	64269299	64269398	(70817224)	+	L2a	LINE/L2	3290	3421	(5)	665281
12	29.7	3.2	1.5	chr11	64713287	64713349	(70373273)	+	(CGCGCGT)n	Simple_repeat	1	65	(0)	666089
15	14.7	0.0	0.0	chr11	65041184	65041213	(70045409)	+	(GCCCC)n	Simple_repeat	1	30	(0)	666738
17	27.2	0.0	5.5	chr11	65539064	65539136	(69547486)	+	(GGC)n	Simple_repeat	1	73	(0)	667738
26	0.0	0.0	0.0	chr11	65833561	65833585	(69253037)	+	(CTTCCC)n	Simple_repeat	1	25	(0)	668265
12	10.5	0.0	10.5	chr11	65890604	65890641	(69195981)	+	(GCCCC)n	Simple_repeat	1	38	(0)	668358
15	14.5	5.3	0.0	chr11	65890689	65890726	(69195896)	+	(CGGAGC)n	Simple_repeat	1	40	(0)	668359
13	15.9	2.6	5.0	chr11	65890858	65890896	(69195726)	+	(GCG)n	Simple_repeat	1	40	(0)	668360
359	26.6	1.9	6.0	chr11	66546597	66546744	(68539878)	C	MIRb	SINE/MIR	(64)	166	28	669759
203	24.6	4.2	4.2	chr11	67391620	67391691	(67694931)	C	MIRc	SINE/MIR	(184)	84	13	671564
13	21.7	2.6	0.0	chr11	67391937	67391974	(67694648)	+	G-rich	Low_complexity	1	39	(0)	671565
181	21.4	8.7	9.7	chr11	67483484	67483576	(67603046)	+	AmnSINE1	SINE/5S-Deu-L2	33	124	(451)	671731
193	32.0	17.0	0.0	chr11	69476072	69476193	(65610429)	+	MIRb	SINE/MIR	110	256	(12)	675153
12	26.1	1.8	3.5	chr11	70815158	70815175	(64271447)	+	GA-rich	Low_complexity	1	19	(0)	677404
73	0.0	0.0	0.0	chr11	70815176	70815237	(64271385)	+	(AC)n	Simple_repeat	1	62	(0)	677405
12	26.1	1.8	3.5	chr11	70815238	70815274	(64271348)	+	GA-rich	Low_complexity	20	54	(0)	677406
19	25.4	0.0	0.0	chr11	75668888	75668938	(59417684)	+	(GCC)n	Simple_repeat	1	51	(0)	686539
187	22.6	5.4	0.0	chr11	76799162	76799214	(58287408)	+	MIRb	SINE/MIR	97	152	(116)	688698
12	17.6	4.0	5.8	chr11	77040151	77040200	(58046422)	+	(GCACGCT)n	Simple_repeat	1	52	(0)	689144
219	36.1	3.6	0.7	chr11	77176197	77176337	(57910285)	+	MIRc	SINE/MIR	29	179	(89)	689395
13	12.6	8.6	0.0	chr11	77589618	77589652	(57496970)	+	(CCG)n	Simple_repeat	1	38	(0)	690202
4739	25.5	5.8	4.4	chr11	77789034	77790099	(57296523)	+	L1M2	LINE/L1	822	1921	(5645)	690603
14	15.0	5.4	0.0	chr11	78023094	78023130	(57063492)	+	G-rich	Low_complexity	1	39	(0)	691140
528	33.3	6.7	1.6	chr11	79441823	79442075	(55644547)	+	MIRb	SINE/MIR	2	268	(0)	693948
218	28.4	3.9	0.0	chr11	85854743	85854816	(49231806)	C	MIR3	SINE/MIR	(47)	161	85	704507
16	9.7	0.0	0.0	chr11	92550765	92550786	(42535836)	+	(T)n	Simple_repeat	1	22	(0)	714330
2087	8.2	0.0	12.9	chr11	93661104	93661445	(41425177)	C	AluJb	SINE/Alu	(14)	298	1	715957
13	23.4	0.0	2.4	chr11	93661502	93661543	(41425079)	+	G-rich	Low_complexity	1	42	(0)	715958
640	17.0	7.5	3.6	chr11	93729191	93729330	(41357292)	+	AluJb	SINE/Alu	43	188	(124)	716062
300	21.9	2.1	0.0	chr11	93729331	93729392	(41357230)	+	AluJb	SINE/Alu	220	284	(17)	716062
6961	15.8	8.7	9.8	chr11	93772121	93773794	(41312828)	C	MER52D	LTR/ERV1	(0)	2123	470	716144
45941	10.3	2.1	2.0	chr11	94650510	94657040	(40429582)	+	HERV4_I-int	LTR/ERV1	1	6539	(0)	717469
492	17.7	4.8	2.8	chr11	94657041	94657173	(40429449)	+	MER51B	LTR/ERV1	1	138	(239)	717469
12	25.1	3.2	4.7	chr11	95067557	95067618	(40019004)	+	(GGC)n	Simple_repeat	1	64	(0)	718067
21	22.7	4.1	4.8	chr11	102452775	102452889	(32633733)	+	G-rich	Low_complexity	1	114	(0)	727947
8183	19.6	3.3	2.1	chr11	103325547	103327287	(31759335)	C	L1P4a	LINE/L1	(4728)	2057	288	729311
5758	6.9	0.1	2.0	chr11	103738891	103739704	(31346918)	+	L1PA3	LINE/L1	2	800	(5355)	729890
15	11.3	4.1	3.9	chr11	118152814	118152857	(16933765)	+	G-rich	Low_complexity	1	44	(0)	752413
19	26.2	2.1	5.2	chr11	118152876	118152946	(16933676)	+	(GGAGCA)n	Simple_repeat	1	96	(0)	752414
19	18.3	1.9	3.7	chr11	118152901	118152953	(16933669)	+	GA-rich	Low_complexity	1	54	(0)	752415
12	0.0	4.3	4.2	chr11	118152947	118152969	(16933653)	+	(GAGC)n	Simple_repeat	1	24	(0)	752416
12	3.9	3.1	9.1	chr11	118909223	118909254	(16177368)	+	(GGCA)n	Simple_repeat	1	33	(0)	753850
13	17.4	4.9	2.3	chr11	119168735	119168775	(15917847)	+	G-rich	Low_complexity	1	43	(0)	754377
14	25.2	3.5	1.7	chr11	119729178	119729235	(15357387)	+	(CGCTCT)n	Simple_repeat	1	60	(0)	755357
635	21.7	4.8	2.7	chr11	120324638	120324809	(14761813)	C	MIR	SINE/MIR	(13)	249	83	756366
213	25.9	17.6	3.6	chr11	120324915	120325026	(14761596)	+	L2b	LINE/L2	3268	3420	(6)	756367
19	17.6	5.9	0.0	chr11	121452172	121452222	(13634400)	+	(GGC)n	Simple_repeat	1	54	(0)	758141
30	26.3	3.4	2.4	chr11	121452223	121452262	(13634360)	+	(CGGCG)n	Simple_repeat	50	123	(0)	758140
13	13.8	2.9	2.9	chr11	122981927	122981960	(12104662)	+	G-rich	Low_complexity	1	35	(0)	760558
18	17.5	3.6	3.5	chr11	123431170	123431224	(11655398)	+	(CGTCC)n	Simple_repeat	1	57	(0)	761531
185	28.9	1.3	1.3	chr11	126417082	126417158	(8669464)	C	MIR1_Amn	SINE/MIR	(88)	142	66	766062
16	11.8	7.9	0.0	chr11	128819571	128819608	(6267014)	+	GA-rich	Low_complexity	1	41	(0)	769433
570	32.6	3.8	0.4	chr11	130403278	130403505	(4683117)	+	UCON29	DNA/PiggyBac?	39	274	(165)	771866
416	28.9	12.3	1.7	chr11	131905101	131905299	(3181323)	C	MIRb	SINE/MIR	(37)	231	16	773983
14	24.5	6.2	1.5	chr11	133579709	133579772	(1506850)	+	(GCA)n	Simple_repeat	1	68	(0)	776118
13	11.1	10.3	0.0	chr11	133579917	133579955	(1506667)	+	GA-rich	Low_complexity	1	43	(0)	776119
525	21.2	3.6	0.8	chr12	546869	547001	(132728308)	C	MIR3	SINE/MIR	(52)	156	20	778943
1310	22.2	3.5	1.3	chr12	547183	547492	(132727817)	+	L1MA4A	LINE/L1	5985	6301	(2)	778944
603	30.4	9.7	10.8	chr12	718932	719186	(132556123)	+	L2c	LINE/L2	1658	1951	(1468)	779325
1828	16.7	10.5	18.2	chr12	719187	719734	(132555575)	C	LTR36	LTR/ERV1	(1)	610	121	779328
331	34.0	6.0	0.5	chr12	2034715	2034903	(131240406)	C	L2c	LINE/L2	(0)	3387	3188	781595
190	19.3	5.0	5.0	chr12	2057283	2057342	(131217967)	+	L2b	LINE/L2	3316	3375	(0)	781630
21	26.1	2.5	2.4	chr12	2795036	2795116	(130480193)	+	(CCGCGC)n	Simple_repeat	1	83	(0)	782670
11	21.5	6.0	1.9	chr12	4272316	4272365	(129002944)	+	(GCCCGC)n	Simple_repeat	1	53	(0)	785270
226	33.8	11.8	2.8	chr12	6538722	6538937	(126736372)	+	MIR	SINE/MIR	15	252	(10)	788908
186	24.5	3.6	0.0	chr12	6538940	6538992	(126736317)	+	MIRb	SINE/MIR	144	198	(70)	788909
23	14.5	0.0	0.0	chr12	6778615	6778652	(126496657)	+	(TC)n	Simple_repeat	1	38	(0)	789364
17	24.3	1.9	0.0	chr12	6778866	6778910	(126496399)	+	(CGCGCA)n	Simple_repeat	1	45	(0)	789365
31	3.3	0.0	0.0	chr12	6778911	6778941	(126496368)	+	(CA)n	Simple_repeat	1	31	(0)	789366
17	24.3	1.9	0.0	chr12	6778942	6778953	(126496356)	+	(CGCGCA)n	Simple_repeat	5	17	(0)	789367
13	19.5	0.0	2.7	chr12	6868047	6868083	(126407226)	+	(CCTGCGC)n	Simple_repeat	1	37	(0)	789531
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
19	7.2	0.0	0.0	chr12	6938123	6938152	(126337157)	+	(CTGCG)n	Simple_repeat	1	30	(0)	789669
541	3.2	0.0	0.0	chr12	6943817	6943878	(126331431)	+	U7	snRNA	2	63	(0)	789678
13	20.7	5.8	1.8	chr12	8698397	8698448	(124576861)	+	G-rich	Low_complexity	1	55	(0)	792748
5449	18.5	13.1	5.2	chr12	9065174	9066669	(124208640)	+	MER52D	LTR/ERV1	490	2121	(2)	793384
14	22.7	2.0	3.9	chr12	11500684	11500733	(121774576)	+	(GCC)n	Simple_repeat	1	51	(0)	796566
59	3.3	0.0	0.0	chr12	13000193	13000254	(120275055)	+	(GGCGGCAG)n	Simple_repeat	1	62	(0)	799225
15	12.1	3.9	7.4	chr12	13000268	13000319	(120274990)	+	(GGCAGA)n	Simple_repeat	1	54	(0)	799226
17	20.8	3.4	3.3	chr12	15789446	15789504	(117485805)	+	(CGAG)n	Simple_repeat	1	61	(0)	803291
25	22.0	1.4	2.7	chr12	19439621	19439692	(113835617)	+	GA-rich	Low_complexity	1	73	(0)	808199
11291	19.6	3.4	1.3	chr12	19571074	19574397	(113700912)	C	L1PREC2	LINE/L1	(3307)	4834	1127	808439
14	20.5	2.6	0.0	chr12	22625288	22625326	(110649983)	+	(CCGC)n	Simple_repeat	1	40	(0)	812441
19	26.9	0.0	3.0	chr12	22625357	22625422	(110649887)	+	(GTC)n	Simple_repeat	1	66	(0)	812442
7020	16.9	15.0	2.3	chr12	25884058	25885899	(107389410)	+	MER52D	LTR/ERV1	7	2123	(0)	817150
14	18.5	2.6	2.5	chr12	30754859	30754897	(102520412)	+	(CTC)n	Simple_repeat	1	40	(0)	824129
300	35.0	6.2	6.9	chr12	30755000	30755260	(102520049)	+	L1M4b	LINE/L1	291	549	(6318)	824130
17	13.2	5.5	5.2	chr12	45990597	45990651	(87284658)	+	(CCTC)n	Simple_repeat	1	58	(0)	841694
16	0.0	0.0	0.0	chr12	48925376	48925395	(84349914)	+	(AGC)n	Simple_repeat	1	20	(0)	846095
12	16.5	0.0	0.0	chr12	48925517	48925543	(84349766)	+	(GACGG)n	Simple_repeat	1	27	(0)	846096
13	25.2	2.4	0.0	chr12	48925552	48925593	(84349716)	+	(CTC)n	Simple_repeat	1	43	(0)	846097
16	13.2	0.0	0.0	chr12	48998772	48998805	(84276504)	+	(GT)n	Simple_repeat	1	34	(0)	846236
27	0.0	0.0	0.0	chr12	49544139	49544164	(83731145)	+	(CCTC)n	Simple_repeat	1	26	(0)	847408
17	16.3	6.8	3.2	chr12	49707425	49707483	(83567826)	+	(CCGCG)n	Simple_repeat	1	63	(0)	847645
13	29.6	0.0	3.5	chr12	49707465	49707521	(83567788)	+	(CCCT)n	Simple_repeat	1	57	(0)	847646
20	18.8	0.0	3.9	chr12	50505002	50505053	(82770256)	+	(GGC)n	Simple_repeat	1	52	(0)	849382
15	32.3	0.0	1.6	chr12	51083338	51083400	(82191909)	+	(CCG)n	Simple_repeat	1	63	(0)	850560
13	20.3	0.0	4.7	chr12	53493035	53493077	(79782232)	+	G-rich	Low_complexity	1	43	(0)	854860
11	27.2	2.0	2.0	chr12	53493221	53493270	(79782039)	+	G-rich	Low_complexity	1	51	(0)	854861
20	24.6	6.0	1.1	chr12	56104552	56104639	(77170670)	+	(CTCG)n	Simple_repeat	1	92	(0)	858918
343	24.9	10.3	1.9	chr12	59317631	59317790	(73957519)	C	LTR46	LTR/ERV1	(4)	456	282	863956
468	20.2	2.0	0.0	chr12	59317883	59317981	(73957328)	C	LTR46	LTR/ERV1	(359)	101	1	863956
890	24.6	0.8	5.5	chr12	59317982	59318235	(73957074)	C	L1MD2	LINE/L1	(411)	5831	5590	863954
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
16	13.6	2.2	6.4	chr12	65121355	65121400	(68153909)	+	GA-rich	Low_complexity	1	47	(0)	872296
196	26.0	2.0	0.0	chr12	67070118	67070167	(66205142)	+	L3b	LINE/CR1	4875	4925	(307)	875356
19	19.8	0.0	6.7	chr12	69239578	69239637	(64035672)	+	(GCG)n	Simple_repeat	1	60	(0)	878960
23	30.3	4.6	0.9	chr12	75390913	75391020	(57884289)	+	(CCTCTCC)n	Simple_repeat	1	113	(0)	887474
749	20.7	14.2	10.7	chr12	75391553	75391953	(57883356)	C	MER96B	DNA/hAT-Tip100	(0)	417	1	887475
13	16.2	5.4	6.8	chr12	76764091	76764146	(56511163)	+	GA-rich	Low_complexity	1	59	(0)	889813
17	14.2	8.9	1.6	chr12	76764146	76764201	(56511108)	+	(GCTCGC)n	Simple_repeat	1	61	(0)	889814
17	9.9	0.0	5.4	chr12	89525939	89525975	(43749334)	+	G-rich	Low_complexity	1	37	(0)	907165
407	27.2	1.4	2.9	chr12	94203634	94203773	(39071536)	+	MIR	SINE/MIR	96	233	(29)	914859
1912	18.0	7.3	2.9	chr12	94203786	94204163	(39071146)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	914860
23	13.8	0.0	0.0	chr12	98457029	98457068	(34818241)	+	(CAG)n	Simple_repeat	1	40	(0)	922247
17	28.4	0.0	1.8	chr12	100573651	100573707	(32701602)	+	(GGC)n	Simple_repeat	1	57	(0)	925852
24	7.5	2.2	4.3	chr12	107225727	107225772	(26049537)	+	(GGA)n	Simple_repeat	1	47	(0)	937669
3180	13.8	10.3	4.2	chr12	109273064	109273268	(24002041)	C	L1MB3	LINE/L1	(548)	5635	5454	942163
477	31.3	5.4	4.9	chr12	109572739	109573107	(23702202)	+	MamRep4096	DNA/hAT-Tip100	1	371	(55)	942773
327	21.1	1.9	1.3	chr12	109736381	109736470	(23538839)	C	MIRb	SINE/MIR	(111)	157	62	943196
224	18.2	0.0	10.2	chr12	109736645	109736693	(23538616)	+	L2b	LINE/L2	3309	3352	(23)	943197
20	21.4	4.9	3.5	chr12	109911187	109911267	(23364042)	+	(AGCTGG)n	Simple_repeat	1	85	(0)	943624
1936	16.1	0.3	0.3	chr12	109911330	109911639	(23363670)	+	AluJb	SINE/Alu	1	310	(2)	943625
12	22.2	9.8	2.2	chr12	111368932	111369013	(21906296)	+	(CGGCGA)n	Simple_repeat	1	90	(0)	946920
14	13.1	0.0	0.0	chr12	111368992	111369017	(21906292)	+	(CGG)n	Simple_repeat	1	26	(0)	946921
14	25.4	3.0	4.4	chr12	112418853	112418936	(20856373)	+	(GGC)n	Simple_repeat	1	82	(0)	949170
217	33.4	11.3	0.8	chr12	113065218	113065362	(20209947)	C	MIR1_Amn	SINE/MIR	(24)	206	49	950707
18	12.1	2.6	2.6	chr12	113077644	113077681	(20197628)	+	(CCG)n	Simple_repeat	1	39	(0)	950738
457	30.3	10.6	0.0	chr12	116687776	116687953	(16587356)	C	MIRb	SINE/MIR	(31)	237	39	958701
33	16.5	1.1	6.5	chr12	117968829	117968920	(15306389)	+	(TGC)n	Simple_repeat	1	93	(0)	961512
13	18.8	0.0	5.0	chr12	117968993	117969032	(15306277)	+	G-rich	Low_complexity	1	40	(0)	961513
12	5.5	0.0	0.0	chr12	117969131	117969149	(15306160)	+	(GGA)n	Simple_repeat	1	19	(0)	961514
11	25.8	0.0	7.8	chr12	120117232	120117295	(13158014)	+	(GGCCCC)n	Simple_repeat	1	64	(0)	966263
669	26.9	7.0	2.3	chr12	120395061	120395277	(12880032)	+	MIRb	SINE/MIR	34	261	(7)	966927
12	17.3	11.7	1.5	chr12	120999561	120999620	(12275689)	+	(CCAG)n	Simple_repeat	1	67	(0)	968338
13	12.7	0.0	0.0	chr12	121578636	121578661	(11696648)	+	(CCCAC)n	Simple_repeat	1	26	(0)	969715
22	9.1	0.0	0.0	chr12	122183156	122183235	(11092074)	+	(GTCCGA)n	Simple_repeat	1	80	(0)	971274
23	9.4	0.0	7.5	chr12	122226368	122226420	(11048889)	+	(GGCGG)n	Simple_repeat	1	53	(0)	971354
245	31.3	6.9	4.1	chr12	123402184	123402353	(9872956)	C	L2a	LINE/L2	(602)	2817	2643	973972
196	33.8	2.9	0.0	chr12	123402369	123402436	(9872873)	+	L2b	LINE/L2	3292	3361	(14)	973984
12	13.7	2.7	5.3	chr12	124863531	124863567	(8411742)	+	(CCCGGCG)n	Simple_repeat	1	38	(0)	976995
12	14.1	10.0	4.5	chr12	124863641	124863700	(8411609)	+	(ACAGCGC)n	Simple_repeat	1	66	(0)	976996
26	0.0	0.0	5.9	chr12	124863979	124864012	(8411297)	+	(CGGGG)n	Simple_repeat	1	34	(0)	976997
515	24.8	8.2	0.0	chr12	125280429	125280585	(7994724)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	241	977946
332	29.1	2.5	0.0	chr12	125280657	125280773	(7994536)	C	MLT1I	LTR/ERVL-MaLR	(277)	134	15	977946
393	14.1	0.0	0.0	chr12	132189953	132190016	(1085293)	+	L1PA6	LINE/L1	6091	6154	(0)	989189
268	28.1	3.3	0.0	chr12	132190020	132190108	(1085201)	C	L1MD3	LINE/L1	(5)	7990	7899	989190
361	26.4	5.5	0.0	chr12	132190290	132190410	(1084899)	C	L1M5	LINE/L1	(697)	5747	5620	989191
570	31.6	2.2	1.7	chr12	132430121	132430300	(845009)	+	MIR	SINE/MIR	81	261	(1)	989445
450	32.3	0.7	2.1	chr12	132950321	132951996	(323313)	+	(CA)n	Simple_repeat	1	1688	(0)	990224
16	16.2	6.0	1.9	chr13	24680678	24680727	(89683601)	+	(GCGCTCC)n	Simple_repeat	1	53	(0)	1000636
13	20.3	6.7	0.0	chr13	28495215	28495259	(85869069)	+	(TCC)n	Simple_repeat	1	48	(0)	1006835
16	26.9	2.9	2.8	chr13	36346430	36346499	(78017829)	+	(CGC)n	Simple_repeat	1	72	(0)	1018402
252	17.6	6.3	2.6	chr13	36999490	36999565	(77364763)	+	MER53	DNA/hAT	3	81	(112)	1019392
14	10.0	6.2	0.0	chr13	37000762	37000793	(77363535)	+	(GCGCAG)n	Simple_repeat	1	34	(0)	1019397
2400	6.1	0.4	0.0	chr13	37001128	37001406	(77362922)	+	AluSx1	SINE/Alu	1	280	(32)	1019398
12	28.3	1.7	3.3	chr13	37059689	37059747	(77304581)	+	(GGCG)n	Simple_repeat	1	60	(0)	1019478
12	22.5	2.3	2.3	chr13	37059731	37059773	(77304555)	+	(GGAGCCT)n	Simple_repeat	1	44	(0)	1019479
3995	13.2	8.2	0.6	chr13	38624669	38625340	(75738988)	+	LTR9A1	LTR/ERV1	1	728	(0)	1021496
3095	17.6	3.7	3.5	chr13	38625341	38625708	(75738620)	+	L1MA8	LINE/L1	5906	6269	(22)	1021495
18693	16.5	4.3	2.2	chr13	40812799	40816859	(73547469)	+	L1PA16	LINE/L1	829	5395	(2746)	1024760
14	17.6	2.5	2.4	chr13	41457396	41457435	(72906893)	+	G-rich	Low_complexity	1	41	(0)	1025878
18	10.0	4.1	5.9	chr13	41457466	41457515	(72906813)	+	(GCCCCG)n	Simple_repeat	1	49	(0)	1025879
63	13.9	4.1	0.0	chr13	43879726	43879847	(70484481)	+	(CGAGG)n	Simple_repeat	1	127	(0)	1029464
11	33.5	0.0	4.2	chr13	44575830	44575901	(69788427)	+	(GGAGGC)n	Simple_repeat	1	72	(0)	1030511
326	20.6	0.0	0.0	chr13	44917926	44917998	(69446330)	C	tRNA-Glu-GAG_	tRNA	(2)	73	1	1031204
13	27.4	0.0	6.2	chr13	49792664	49792727	(64571601)	+	G-rich	Low_complexity	1	64	(0)	1039049
30	11.8	8.0	1.2	chr13	51222279	51222353	(63141975)	+	(GGCGCG)n	Simple_repeat	1	81	(0)	1041254
336	25.8	22.1	0.8	chr13	51259064	51259415	(63104913)	+	L2a	LINE/L2	2520	2967	(452)	1041297
229	22.1	0.8	3.2	chr13	52159787	52159872	(62204456)	+	MIRc	SINE/MIR	16	102	(166)	1042687
621	25.0	11.8	6.3	chr13	52159874	52160176	(62204152)	+	MLT1D	LTR/ERVL-MaLR	1	322	(183)	1042688
14	16.5	5.9	3.7	chr13	52406197	52406247	(61958081)	+	(GGCG)n	Simple_repeat	1	54	(0)	1043056
16	26.2	1.8	1.8	chr13	52847304	52847359	(61516969)	+	(GCG)n	Simple_repeat	1	57	(0)	1043780
41	2.4	0.0	0.0	chr13	53201091	53201132	(61163196)	+	(CGC)n	Simple_repeat	1	42	(0)	1044310
23	25.0	1.8	0.0	chr13	67230277	67230331	(47133997)	+	(CT)n	Simple_repeat	1	56	(0)	1062005
18	14.6	2.6	0.0	chr13	72727555	72727592	(41636736)	+	(CGC)n	Simple_repeat	1	39	(0)	1069242
7245	18.6	11.7	2.7	chr13	72851059	72852651	(41511677)	+	MER52A	LTR/ERV1	1	1755	(0)	1069444
20	16.2	0.0	2.3	chr13	75549747	75549789	(38814539)	+	(GGC)n	Simple_repeat	1	43	(0)	1073544
12	25.8	1.9	3.6	chr13	76992139	76992192	(37372136)	+	(GGCGCG)n	Simple_repeat	1	55	(0)	1075557
13	13.1	0.0	0.0	chr13	87677539	87677563	(26686765)	+	(CGG)n	Simple_repeat	1	25	(0)	1089329
37	23.5	0.0	1.1	chr13	87677746	87677837	(26686491)	+	(CAG)n	Simple_repeat	1	92	(0)	1089330
3817	9.7	0.6	3.1	chr13	95473940	95474482	(18889846)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	1100183
406	29.0	6.8	0.5	chr13	98821111	98821304	(15543024)	+	LTR33	LTR/ERVL	10	216	(299)	1105280
596	25.4	6.8	1.1	chr13	98821371	98821549	(15542779)	+	LTR33	LTR/ERVL	321	510	(5)	1105280
190	29.1	4.8	9.2	chr13	98876067	98876153	(15488175)	C	OldhAT1	DNA/hAT-Ac	(1615)	1233	1151	1105337
2290	9.9	0.4	0.0	chr13	98876210	98876482	(15487846)	+	AluSq	SINE/Alu	1	274	(39)	1105338
32	22.2	1.8	4.5	chr13	99606510	99606661	(14757667)	+	G-rich	Low_complexity	1	147	(0)	1106537
14	21.8	6.8	3.8	chr13	99606673	99606758	(14757570)	+	(GGC)n	Simple_repeat	1	88	(0)	1106538
2258	8.2	3.0	0.0	chr13	99700171	99700463	(14663865)	+	AluSp	SINE/Alu	1	302	(11)	1106687
21	24.0	4.0	1.3	chr13	99981545	99981619	(14382709)	+	(GCGCGT)n	Simple_repeat	1	78	(0)	1107135
16	31.2	2.9	1.4	chr13	99981581	99981649	(14382679)	+	(GC)n	Simple_repeat	1	71	(0)	1107136
20	18.4	1.2	8.6	chr13	99981660	99981739	(14382589)	+	(CCTC)n	Simple_repeat	1	81	(0)	1107137
14	17.3	5.1	0.0	chr13	99981706	99981744	(14382584)	+	(CCCGC)n	Simple_repeat	1	41	(0)	1107138
12	23.4	4.6	4.4	chr13	100089149	100089213	(14275115)	+	(CGCTGG)n	Simple_repeat	1	68	(0)	1107378
12	15.3	5.3	2.5	chr13	100588762	100588799	(13775529)	+	G-rich	Low_complexity	1	40	(0)	1108183
815	29.4	7.3	4.7	chr13	103436100	103436566	(10927762)	C	LTR16B1	LTR/ERVL	(0)	480	1	1112168
11	21.6	0.0	4.9	chr13	111154010	111154050	(3210278)	+	G-rich	Low_complexity	1	41	(0)	1122233
17	12.7	0.0	0.0	chr13	112588396	112588421	(1775907)	+	(GT)n	Simple_repeat	1	26	(0)	1123662
567	26.5	18.0	3.5	chr13	112735466	112735837	(1628491)	C	Charlie15b	DNA/hAT-Charlie	(82)	979	542	1123883
537	30.5	5.0	2.8	chr13	112736133	112736385	(1627943)	+	MIRb	SINE/MIR	6	264	(4)	1123884
13	15.6	2.0	7.8	chr13	113296931	113296980	(1067348)	+	(CTTCCT)n	Simple_repeat	1	51	(0)	1124474
26	25.2	4.8	3.1	chr13	113297341	113297347	(1066981)	+	(GCGCCCC)n	Simple_repeat	1	15	(115)	1124475
12	29.0	2.8	4.0	chr13	113297348	113297419	(1066909)	+	(CGCAC)n	Simple_repeat	1	74	(0)	1124476
26	25.2	4.8	3.1	chr13	113297420	113297464	(1066864)	+	(GCGCCCC)n	Simple_repeat	16	130	(0)	1124475
19	7.4	0.0	0.0	chr13	113297465	113297493	(1066835)	+	(CTG)n	Simple_repeat	1	29	(0)	1124477
200	36.4	1.2	0.1	chr13	113750914	113751408	(612920)	+	(TG)n	Simple_repeat	1	501	(0)	1124991
12	24.3	0.0	4.3	chr13	114234973	114235019	(129309)	+	G-rich	Low_complexity	1	47	(0)	1125385
234	26.4	4.6	14.4	chr14	24140613	24140758	(82902960)	+	L2c	LINE/L2	3255	3385	(2)	1133810
13	23.5	0.0	0.0	chr14	24316281	24316315	(82727403)	+	(CCG)n	Simple_repeat	1	35	(0)	1134063
12	7.2	10.3	0.0	chr14	35046379	35046407	(71997311)	+	(GGCGCG)n	Simple_repeat	1	32	(0)	1149236
615	34.2	15.1	1.4	chr14	38201252	38201735	(68841983)	C	MER115	DNA/hAT-Tip100	(75)	618	57	1153975
16	4.1	0.0	3.7	chr14	38205442	38205468	(68838250)	+	(TTTG)n	Simple_repeat	1	27	(0)	1153979
1732	18.2	0.3	1.4	chr14	38205512	38205795	(68837923)	+	AluJr	SINE/Alu	1	284	(28)	1153980
47	0.0	0.0	0.0	chr14	38205796	38205837	(68837881)	+	(AAT)n	Simple_repeat	1	42	(0)	1153981
34	29.1	1.4	3.5	chr14	39431953	39431960	(67611758)	+	(CGC)n	Simple_repeat	1	14	(130)	1155722
13	24.6	4.5	2.9	chr14	39431961	39432026	(67611692)	+	(CGCCTGC)n	Simple_repeat	1	69	(0)	1155723
34	29.1	1.4	3.5	chr14	39432027	39432094	(67611624)	+	(CGC)n	Simple_repeat	15	144	(0)	1155722
13	29.7	1.5	3.0	chr14	49688218	49688282	(57355436)	+	(GCCCCG)n	Simple_repeat	1	66	(0)	1168416
23	10.4	0.0	4.4	chr14	50231658	50231702	(56812016)	+	(CGG)n	Simple_repeat	1	45	(0)	1169572
24	26.0	0.0	5.5	chr14	50532503	50532593	(56511125)	+	(GCC)n	Simple_repeat	1	91	(0)	1170125
13	16.3	6.5	6.1	chr14	50668403	50668464	(56375254)	+	G-rich	Low_complexity	1	66	(0)	1170320
14	29.8	0.0	3.3	chr14	50944096	50944156	(56099562)	+	(CCCGGC)n	Simple_repeat	1	61	(0)	1170724
14	24.7	0.0	0.0	chr14	52791516	52791554	(54252164)	+	(CACCGC)n	Simple_repeat	1	39	(0)	1173517
39	22.3	3.6	4.2	chr14	53956783	53956921	(53086797)	+	(CTCC)n	Simple_repeat	1	144	(0)	1175257
13	15.1	5.1	2.4	chr14	57268730	57268768	(49774950)	+	(CTCCG)n	Simple_repeat	1	41	(0)	1180525
15	3.2	5.3	7.5	chr14	58151785	58151822	(48891896)	+	(GCTGGA)n	Simple_repeat	1	40	(0)	1181701
26	25.4	1.1	3.3	chr14	58152093	58152181	(48891537)	+	(GCG)n	Simple_repeat	1	90	(0)	1181702
21	22.7	2.9	2.8	chr14	59870814	59870883	(47172835)	+	(CTC)n	Simple_repeat	1	72	(0)	1184293
13	24.6	3.5	3.4	chr14	59870849	59870905	(47172813)	+	(GCT)n	Simple_repeat	1	59	(0)	1184294
12	8.8	4.2	0.0	chr14	73136550	73136573	(33907145)	+	(GCG)n	Simple_repeat	1	25	(0)	1205593
12	19.7	0.0	0.0	chr14	73136699	73136727	(33906991)	+	G-rich	Low_complexity	1	29	(0)	1205594
15	17.6	0.0	0.0	chr14	73239780	73239822	(33803896)	+	(TGC)n	Simple_repeat	1	43	(0)	1205807
18	18.5	7.6	3.5	chr14	74349334	74349412	(32694306)	+	(GGCAG)n	Simple_repeat	1	85	(0)	1208336
311	31.3	16.2	0.7	chr14	74362057	74362326	(32681392)	+	L2	LINE/L2	2653	2972	(447)	1208361
15	21.6	2.3	0.0	chr14	74955452	74955494	(32088224)	+	G-rich	Low_complexity	1	44	(0)	1209463
12	12.0	0.0	6.5	chr14	76812884	76812914	(30230804)	+	(GCCCG)n	Simple_repeat	1	31	(0)	1212987
22	22.3	3.9	5.6	chr14	76947454	76947571	(30096147)	+	(TGCCCC)n	Simple_repeat	1	115	(0)	1213267
425	16.7	0.0	0.0	chr14	76968916	76968981	(30074737)	C	AluSq10	SINE/Alu	(247)	66	1	1213319
574	10.7	0.0	0.0	chr14	76969186	76969260	(30074458)	+	AluSx	SINE/Alu	100	174	(138)	1213320
333	21.8	23.6	3.9	chr14	77068659	77068840	(29974878)	C	MIR	SINE/MIR	(25)	243	1	1213547
16	24.0	0.0	5.1	chr14	77616376	77616434	(29427284)	+	(CCCCG)n	Simple_repeat	1	59	(0)	1214574
18	9.4	2.9	0.0	chr14	77616453	77616486	(29427232)	+	(CGGCTG)n	Simple_repeat	1	35	(0)	1214575
12	13.9	0.0	0.0	chr14	77616616	77616639	(29427079)	+	(GGC)n	Simple_repeat	1	24	(0)	1214576
11	13.2	5.7	2.7	chr14	77800566	77800600	(29243118)	+	(AGCTGG)n	Simple_repeat	1	37	(0)	1215002
20	14.6	0.0	0.0	chr14	77980957	77980994	(29062724)	+	(TGCGTG)n	Simple_repeat	1	38	(0)	1215412
351	22.9	1.9	6.2	chr14	88977785	88977896	(18065822)	+	MamRep564	Unknown	143	249	(108)	1231306
366	32.0	12.0	1.7	chr14	88978045	88978216	(18065502)	+	MER91A	DNA/hAT-Tip100	5	196	(0)	1231307
299	34.9	2.6	6.4	chr14	89625937	89626138	(17417580)	+	MIRb	SINE/MIR	28	221	(47)	1232411
724	19.8	2.4	0.0	chr14	90062696	90062857	(16980861)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	1233174
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
15	21.9	0.0	6.7	chr14	90397289	90397295	(16646423)	+	(TTTTTTG)n	Simple_repeat	1	13	(47)	1233835
16	3.4	6.2	2.9	chr14	90397296	90397327	(16646391)	+	(TTGT)n	Simple_repeat	1	34	(0)	1233836
378	34.4	12.8	4.5	chr14	90495027	90495361	(16548357)	C	L2c	LINE/L2	(0)	3387	3021	1234032
745	27.8	10.1	0.8	chr14	90510008	90510250	(16533468)	+	MIRb	SINE/MIR	1	268	(0)	1234064
487	23.0	0.0	0.0	chr14	90510730	90510829	(16532889)	+	MIRc	SINE/MIR	68	167	(101)	1234065
194	30.3	13.2	0.0	chr14	90546747	90546845	(16496873)	C	L2c	LINE/L2	(8)	3379	3266	1234129
14	21.1	3.8	3.6	chr14	91060370	91060422	(15983296)	+	(CCG)n	Simple_repeat	1	55	(0)	1234941
39	15.4	0.0	0.0	chr14	91397440	91397504	(15646214)	+	(AC)n	Simple_repeat	1	65	(0)	1235627
17	16.7	2.4	2.3	chr14	93787661	93787702	(13256016)	+	(GCA)n	Simple_repeat	1	43	(0)	1240007
15	17.7	2.2	4.3	chr14	93939678	93939730	(13103988)	+	G-rich	Low_complexity	1	51	(0)	1240324
592	28.3	0.1	2.5	chr14	93939833	93940016	(13103702)	C	MIRb	SINE/MIR	(80)	188	4	1240325
291	26.5	10.9	3.7	chr14	94027154	94027314	(13016404)	C	MIR3	SINE/MIR	(19)	189	16	1240494
16	23.8	1.7	3.4	chr14	97033427	97033484	(10010234)	+	(CGCTCC)n	Simple_repeat	1	59	(0)	1245951
48	15.6	1.1	0.0	chr14	99274710	99274797	(7768921)	+	(CCT)n	Simple_repeat	1	89	(0)	1249761
27	18.8	0.0	3.1	chr14	99603435	99603498	(7440220)	+	(GCC)n	Simple_repeat	1	64	(0)	1250257
20	25.4	2.7	6.2	chr14	99971306	99971415	(7072303)	+	(CCGCCC)n	Simple_repeat	1	113	(0)	1250931
264	28.9	7.5	0.0	chr14	100214710	100214844	(6828874)	C	MIR3	SINE/MIR	(52)	156	11	1251448
19	29.6	0.0	0.0	chr14	100239373	100239449	(6804269)	+	(CGACGG)n	Simple_repeat	1	77	(0)	1251503
33	2.9	0.0	0.0	chr14	100239451	100239485	(6804233)	+	(CCA)n	Simple_repeat	1	35	(0)	1251504
329	29.7	10.3	1.3	chr14	100586617	100586766	(6456952)	+	MIRb	SINE/MIR	87	251	(17)	1252097
14	14.9	5.4	0.0	chr14	102086933	102086969	(4956749)	+	(CCCCAGT)n	Simple_repeat	1	39	(0)	1254193
683	0.0	0.0	0.0	chr14	102317092	102317165	(4726553)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	1254658
16	0.0	0.0	0.0	chr14	102317173	102317189	(4726529)	+	(T)n	Simple_repeat	1	17	(0)	1254659
17	19.8	8.4	1.3	chr14	102776817	102776887	(4266831)	+	(TGCGTG)n	Simple_repeat	1	77	(0)	1255667
15	20.5	1.4	0.0	chr14	103220568	103220607	(3823111)	+	G-rich	Low_complexity	1	40	(0)	1256388
229	27.7	6.0	4.7	chr14	104138112	104138259	(2905459)	+	MIR3	SINE/MIR	4	153	(55)	1258137
341	29.9	6.0	2.7	chr14	105247990	105248144	(1795574)	+	MIR	SINE/MIR	22	187	(43)	1259421
14	19.9	6.6	3.1	chr14	105398207	105398267	(1645451)	+	(CGCCC)n	Simple_repeat	1	65	(0)	1259622
18	29.9	3.7	2.7	chr15	30904028	30904134	(71087055)	+	(CGCGGC)n	Simple_repeat	1	111	(0)	1277837
11	23.2	1.6	7.7	chr15	40925943	40926006	(61065183)	+	(CCAGGCC)n	Simple_repeat	1	65	(0)	1292209
19	15.8	0.0	4.3	chr15	41882218	41882263	(60108926)	+	(CCCCG)n	Simple_repeat	1	46	(0)	1294184
19	31.9	3.8	0.9	chr15	43746158	43746263	(58244926)	+	(CCCAGC)n	Simple_repeat	1	110	(0)	1297538
15	30.2	0.0	6.6	chr15	43746221	43746311	(58244878)	+	(CCCCGC)n	Simple_repeat	1	91	(0)	1297539
14	14.8	1.9	9.1	chr15	52568729	52568782	(49422407)	+	(GCCTCG)n	Simple_repeat	1	55	(0)	1311518
21	12.6	0.0	0.0	chr15	56733492	56733527	(45257662)	+	(GAG)n	Simple_repeat	1	36	(0)	1317505
12	14.1	3.0	2.9	chr15	56733745	56733777	(45257412)	+	(GCCAGG)n	Simple_repeat	1	34	(0)	1317506
13	13.1	4.1	7.8	chr15	58865325	58865373	(43125816)	+	GA-rich	Low_complexity	1	51	(0)	1320984
23	13.3	3.9	1.9	chr15	59689362	59689412	(42301777)	+	(GGC)n	Simple_repeat	1	53	(0)	1322574
770	11.1	1.7	0.0	chr15	63382162	63382278	(38608911)	C	LTR8	LTR/ERV1	(0)	691	573	1328439
2178	13.2	1.0	0.0	chr15	63382280	63382582	(38608607)	C	AluSx	SINE/Alu	(5)	307	2	1328440
11	20.5	5.1	0.0	chr15	64152351	64152389	(37838800)	+	(GGCCCA)n	Simple_repeat	1	41	(0)	1329861
11	21.0	2.5	2.4	chr15	64807795	64807834	(37183355)	+	(GCCCCT)n	Simple_repeat	1	41	(0)	1331250
12	24.0	0.0	2.4	chr15	64807960	64808000	(37183189)	+	(GAGGCT)n	Simple_repeat	1	41	(0)	1331251
326	28.1	7.0	0.0	chr15	64808286	64808412	(37182777)	+	MIRb	SINE/MIR	28	163	(105)	1331252
13	16.6	2.2	6.4	chr15	64841566	64841611	(37149578)	+	(CGCCC)n	Simple_repeat	1	47	(0)	1331337
247	35.3	5.5	0.8	chr15	66497390	66497509	(35493680)	+	MER5A	DNA/hAT-Charlie	63	188	(1)	1334818
16	14.7	3.3	0.0	chr15	66564646	66564675	(35426514)	+	(CA)n	Simple_repeat	1	31	(0)	1334952
14	25.1	2.1	0.0	chr15	68229352	68229398	(33761791)	+	(CGCCC)n	Simple_repeat	1	48	(0)	1337960
1222	22.2	11.3	0.6	chr15	68559886	68560225	(33430964)	C	ERV3-16A3_LTR	LTR/ERVL	(0)	422	42	1338559
284	24.6	8.0	4.5	chr15	70631261	70631392	(31359797)	C	MLT1K	LTR/ERVL-MaLR	(277)	318	182	1342504
31	24.4	2.6	6.4	chr15	72319943	72320095	(29671094)	+	G-rich	Low_complexity	1	157	(0)	1345247
210	36.4	4.8	0.0	chr15	72376328	72376445	(29614744)	C	L2c	LINE/L2	(233)	3154	3031	1345344
13	13.1	0.0	0.0	chr15	74291623	74291647	(27699542)	+	(AGGC)n	Simple_repeat	1	25	(0)	1348595
2212	6.3	4.7	0.7	chr15	74759964	74760249	(27230940)	C	AluY	SINE/Alu	(13)	298	1	1349461
430	28.4	4.9	2.5	chr15	74760254	74760412	(27230777)	C	MLT1M	LTR/ERVL-MaLR	(402)	270	108	1349462
3389	20.5	8.6	6.0	chr15	78405689	78407135	(23584054)	+	MER52A	LTR/ERV1	10	1733	(22)	1355818
17	17.6	1.7	6.7	chr15	82709459	82709517	(19281672)	+	G-rich	Low_complexity	1	60	(0)	1363302
26	0.0	0.0	0.0	chr15	83207683	83207707	(18783482)	+	(CCG)n	Simple_repeat	1	25	(0)	1364239
195	28.6	3.1	0.0	chr15	89379951	89380013	(12611176)	C	MIRb	SINE/MIR	(176)	92	28	1374116
185	17.6	0.0	0.0	chr15	89416224	89416257	(12574932)	+	L2b	LINE/L2	3339	3372	(3)	1374164
59	9.1	0.0	0.0	chr15	89776890	89776973	(12214216)	+	(AGGGGC)n	Simple_repeat	1	84	(0)	1374860
298	26.4	1.1	6.2	chr15	92655988	92656084	(9335105)	C	MIRb	SINE/MIR	(41)	227	136	1380170
228	22.2	3.6	0.0	chr15	93073540	93073593	(8917596)	C	MamRep1879	DNA/hAT-Tip100?	(130)	86	31	1380954
365	25.6	2.4	2.4	chr15	93477193	93477316	(8513873)	C	L2b	LINE/L2	(1)	3374	3251	1381713
12	19.4	4.7	2.2	chr16	401560	401602	(89936743)	+	(GGAGCCA)n	Simple_repeat	1	45	(0)	1394694
1937	7.0	13.1	0.4	chr16	402163	402434	(89935911)	C	AluSx	SINE/Alu	(0)	312	1	1394695
11	15.2	2.4	7.0	chr16	630884	630925	(89707420)	+	(CCTCTGG)n	Simple_repeat	1	43	(0)	1395033
12	20.8	0.0	2.9	chr16	721433	721467	(89616878)	+	(GCAGG)n	Simple_repeat	1	35	(0)	1395116
35	23.7	3.6	3.5	chr16	1763788	1763924	(88574421)	+	G-rich	Low_complexity	1	142	(0)	1396368
660	16.7	1.8	0.0	chr16	2151107	2151214	(88187131)	C	AluJo	SINE/Alu	(11)	301	192	1396962
16	4.5	0.0	0.0	chr16	2969361	2969383	(87368962)	+	(GCC)n	Simple_repeat	1	23	(0)	1398274
21	6.7	0.0	2.9	chr16	4293973	4294006	(86044339)	+	(CAG)n	Simple_repeat	1	34	(0)	1400871
311	26.2	15.7	2.7	chr16	4297512	4297660	(86040685)	C	MIRb	SINE/MIR	(7)	261	90	1400881
13	21.9	2.3	2.2	chr16	4476448	4476491	(85861854)	+	(GACAGGC)n	Simple_repeat	1	45	(0)	1401226
460	30.3	4.8	3.6	chr16	4937584	4937791	(85400554)	+	MIRb	SINE/MIR	20	231	(37)	1402176
757	22.6	3.7	0.0	chr16	4988401	4988581	(85349764)	C	MER53	DNA/hAT	(5)	188	1	1402314
18	10.8	0.0	0.0	chr16	18983990	18984019	(71354326)	+	(GGC)n	Simple_repeat	1	30	(0)	1432377
345	22.7	6.0	6.8	chr16	19886270	19886387	(70451958)	+	L2a	LINE/L2	3304	3420	(6)	1434582
3252	11.8	7.0	0.2	chr16	19948689	19949198	(70389147)	+	LTR35A	LTR/ERV1	1	547	(0)	1434773
15	28.1	1.9	0.0	chr16	20073675	20073726	(70264619)	+	(CGG)n	Simple_repeat	1	53	(0)	1435075
24	12.7	0.0	0.0	chr16	20073819	20073861	(70264484)	+	(CGCGGGG)n	Simple_repeat	1	43	(0)	1435076
11	19.2	9.1	1.7	chr16	30400368	30400422	(59937923)	+	(CCCGGACA)n	Simple_repeat	1	60	(0)	1457932
12	28.1	3.9	0.0	chr16	30775721	30775772	(59562573)	+	(CTGGCG)n	Simple_repeat	1	54	(0)	1458832
426	15.8	2.6	0.0	chr16	49158048	49158123	(41180222)	C	MER96	DNA/hAT-Tip100	(0)	175	98	1470085
548	26.4	0.6	6.2	chr16	53055421	53055598	(37282747)	C	MER5B	DNA/hAT-Charlie	(6)	172	5	1477119
14	5.0	0.0	0.0	chr16	56617308	56617328	(33721017)	+	(GAGC)n	Simple_repeat	1	21	(0)	1483428
12	8.4	0.0	6.9	chr16	56617421	56617449	(33720896)	+	G-rich	Low_complexity	1	29	(0)	1483429
17	29.4	0.0	3.0	chr16	57284711	57284776	(33053569)	+	(CCG)n	Simple_repeat	1	66	(0)	1484720
15	21.2	0.0	4.3	chr16	57528917	57528963	(32809382)	+	(CGCCCG)n	Simple_repeat	1	47	(0)	1485253
20	21.3	5.6	1.3	chr16	57528991	57529062	(32809283)	+	(GCGCGG)n	Simple_repeat	1	76	(0)	1485254
15	17.2	2.4	2.4	chr16	66552529	66552569	(23785776)	+	(GCGCGT)n	Simple_repeat	1	42	(0)	1499952
15	8.8	10.8	0.0	chr16	67000498	67000534	(23337811)	+	(CACG)n	Simple_repeat	1	41	(0)	1500857
15	21.6	3.5	3.4	chr16	67150351	67150407	(23187938)	+	(CGCTCG)n	Simple_repeat	1	59	(0)	1501184
13	23.1	0.0	9.0	chr16	67174473	67174539	(23163806)	+	(GCAGG)n	Simple_repeat	1	67	(0)	1501216
12	22.1	2.7	0.0	chr16	67178507	67178543	(23159802)	+	G-rich	Low_complexity	1	38	(0)	1501222
15	27.2	0.0	3.5	chr16	68737345	68737401	(21600944)	+	(CCGGC)n	Simple_repeat	1	57	(0)	1504212
13	0.0	0.0	0.0	chr16	68737445	68737461	(21600884)	+	(GCT)n	Simple_repeat	1	17	(0)	1504213
184	27.1	13.7	6.1	chr16	81730244	81730357	(8607988)	+	MamTip2	DNA/hAT-Tip100	182	305	(0)	1527883
16	8.2	0.0	0.0	chr16	82170264	82170289	(8168056)	+	(CGCCC)n	Simple_repeat	1	26	(0)	1528775
256	27.4	8.2	8.2	chr16	84283615	84283773	(6054572)	C	MER5B	DNA/hAT-Charlie	(13)	165	7	1532509
679	0.0	0.0	0.0	chr16	87384022	87384094	(2954251)	C	tRNA-Met_	tRNA	(3)	73	1	1538340
14	12.6	0.0	0.0	chr16	87608555	87608581	(2729764)	+	(GGAGA)n	Simple_repeat	1	27	(0)	1538772
2008	13.2	1.0	0.3	chr16	87608757	87609051	(2729294)	+	AluJb	SINE/Alu	2	298	(14)	1538773
1420	10.3	19.0	0.0	chr16	89564428	89564661	(773684)	+	AluSx	SINE/Alu	1	289	(23)	1541484
182	34.6	5.5	1.9	chr16	89565010	89565115	(773230)	+	LFSINE_Vert	SINE/tRNA	309	418	(41)	1541485
12	8.0	0.0	9.4	chr16	89686931	89686962	(651383)	+	G-rich	Low_complexity	1	32	(0)	1541680
580	16.7	0.0	0.0	chr16	89926575	89926670	(411675)	C	AluSx3	SINE/Alu	(13)	298	203	1542090
13	11.6	0.0	6.2	chr17	1455572	1455603	(81801838)	+	(TGCCC)n	Simple_repeat	1	32	(0)	1547171
2418	9.5	0.0	0.0	chr17	1576859	1577163	(81680278)	C	AluSx3	SINE/Alu	(6)	305	1	1547389
2085	13.2	0.7	1.6	chr17	1585236	1585545	(81671896)	C	AluSz6	SINE/Alu	(5)	307	1	1547408
924	12.7	0.0	4.9	chr17	1585546	1585687	(81671754)	C	AluJr4	SINE/Alu	(177)	135	1	1547409
16	13.2	3.0	0.0	chr17	1645660	1645692	(81611749)	+	(CAG)n	Simple_repeat	1	34	(0)	1547524
14	12.8	6.5	4.1	chr17	2058469	2058514	(81198927)	+	(GCGCG)n	Simple_repeat	1	49	(0)	1548367
2561	5.3	0.0	0.3	chr17	2723187	2723490	(80533951)	C	AluSq	SINE/Alu	(10)	303	1	1549780
2301	9.0	0.0	3.1	chr17	2725091	2725411	(80532030)	+	AluSx1	SINE/Alu	1	311	(1)	1549783
22	25.0	2.2	4.3	chr17	2749665	2749756	(80507685)	+	GA-rich	Low_complexity	1	94	(0)	1549847
341	25.9	10.1	3.0	chr17	2750082	2750266	(80507175)	+	MIR3	SINE/MIR	33	238	(30)	1549848
271	26.1	5.1	5.1	chr17	2828430	2828546	(80428895)	C	L2a	LINE/L2	(284)	3142	3026	1550047
196	27.9	9.0	1.8	chr17	2868159	2868271	(80389170)	+	MamRTE1	LINE/RTE-BovB	124	245	(3567)	1550133
361	34.5	2.1	0.0	chr17	4396044	4396182	(78861259)	C	MIRb	SINE/MIR	(100)	168	27	1552966
673	27.9	8.7	4.0	chr17	4493106	4493378	(78764063)	C	L2c	LINE/L2	(0)	3387	3101	1553204
475	35.8	9.0	4.9	chr17	4493552	4493706	(78763735)	C	L2c	LINE/L2	(377)	3042	2891	1553204
11	18.8	8.0	1.9	chr17	5438851	5438900	(77818541)	+	(GCAGGC)n	Simple_repeat	1	54	(0)	1555141
45	4.1	2.0	0.0	chr17	6069775	6069825	(77187616)	+	(GT)n	Simple_repeat	1	52	(0)	1556345
16	16.1	0.0	0.0	chr17	6069925	6069952	(77187489)	+	(GT)n	Simple_repeat	1	28	(0)	1556346
17	13.3	0.0	0.0	chr17	7394190	7394222	(75863219)	+	(AGACAG)n	Simple_repeat	1	33	(0)	1558757
14	12.8	0.0	7.5	chr17	7394560	7394599	(75862842)	+	(CCCCGC)n	Simple_repeat	1	40	(0)	1558758
13	21.9	2.3	2.2	chr17	7922734	7922777	(75334664)	+	(TGTTTT)n	Simple_repeat	1	45	(0)	1559754
14	24.1	0.0	0.0	chr17	7990074	7990112	(75267329)	+	G-rich	Low_complexity	1	39	(0)	1559894
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
19	23.1	5.2	3.7	chr17	8210229	8210305	(75047136)	+	GA-rich	Low_complexity	1	81	(0)	1560323
2357	10.3	0.3	0.0	chr17	8210788	8211098	(75046343)	C	AluSx1	SINE/Alu	(0)	312	1	1560324
16	8.2	0.0	0.0	chr17	13601837	13601862	(69655579)	+	(GGCTG)n	Simple_repeat	1	26	(0)	1570038
23	29.4	0.0	0.0	chr17	16353137	16353206	(66904235)	+	(CGG)n	Simple_repeat	1	70	(0)	1574772
5150	13.9	6.7	1.8	chr17	17300814	17301774	(65955667)	+	MER52D	LTR/ERV1	564	1575	(548)	1576393
246	31.9	4.2	0.0	chr17	17626722	17626812	(65630629)	C	MIR3	SINE/MIR	(21)	187	93	1577004
17	22.1	0.0	0.0	chr17	17700621	17700662	(65556779)	+	GA-rich	Low_complexity	1	42	(0)	1577188
14	27.1	1.4	5.4	chr17	17783638	17783710	(65473731)	+	(GCCCGC)n	Simple_repeat	1	74	(0)	1577347
19	17.4	5.7	4.0	chr17	19004715	19004784	(64252657)	+	(GGCGGC)n	Simple_repeat	1	74	(0)	1579595
200	30.6	0.0	0.0	chr17	19004974	19005022	(64252419)	C	MIR3	SINE/MIR	(90)	118	70	1579596
13	12.1	0.0	3.5	chr17	20009436	20009464	(63247977)	+	(CCGC)n	Simple_repeat	1	29	(0)	1581768
395	32.5	0.0	0.0	chr17	28986484	28986614	(54270827)	C	MIRb	SINE/MIR	(94)	174	38	1589713
331	28.0	5.3	1.8	chr17	28986709	28986817	(54270624)	+	MIRc	SINE/MIR	40	152	(116)	1589714
12	26.6	4.1	4.0	chr17	29005984	29006056	(54251385)	+	(CAGCGC)n	Simple_repeat	1	76	(0)	1589755
15	25.7	1.9	1.9	chr17	29613497	29613549	(53643892)	+	GA-rich	Low_complexity	1	54	(0)	1591012
13	5.7	10.0	4.5	chr17	29613602	29613641	(53643800)	+	(CGCCAG)n	Simple_repeat	1	44	(0)	1591013
12	16.9	2.9	2.8	chr17	30235684	30235718	(53021723)	+	(GCGGC)n	Simple_repeat	1	36	(0)	1592201
1468	14.8	4.7	6.2	chr17	35448926	35449044	(47808397)	+	AluJb	SINE/Alu	1	117	(195)	1602227
34	0.0	0.0	0.0	chr17	35449045	35449075	(47808366)	+	(ACA)n	Simple_repeat	1	31	(0)	1602228
1468	14.8	4.7	6.2	chr17	35449076	35449260	(47808181)	+	AluJb	SINE/Alu	132	300	(12)	1602227
13	20.5	6.7	0.0	chr17	35741251	35741295	(47516146)	+	(CGCTG)n	Simple_repeat	1	48	(0)	1602707
19	22.2	1.9	0.0	chr17	36948809	36948860	(46308581)	+	(CGCGCA)n	Simple_repeat	1	53	(0)	1604977
14	23.9	0.0	2.2	chr17	37406615	37406660	(45850781)	+	(GCGCCAC)n	Simple_repeat	1	46	(0)	1605791
16	23.8	2.2	2.1	chr17	38419061	38419106	(44838335)	+	(TG)n	Simple_repeat	1	47	(0)	1607822
33	16.4	4.0	0.0	chr17	38419179	38419253	(44838188)	+	G-rich	Low_complexity	1	78	(0)	1607823
26	17.6	3.0	1.5	chr17	42098474	42098539	(41158902)	+	G-rich	Low_complexity	1	68	(0)	1614946
19	15.2	2.5	9.8	chr17	42184176	42184255	(41073186)	+	(GGCGC)n	Simple_repeat	1	82	(0)	1615097
19	7.4	0.0	0.0	chr17	42184480	42184508	(41072933)	+	(GCA)n	Simple_repeat	1	29	(0)	1615098
20	28.0	0.0	1.5	chr17	42548091	42548157	(40709284)	+	G-rich	Low_complexity	1	67	(0)	1615867
23	16.1	4.5	2.9	chr17	43938408	43938473	(39318968)	+	GA-rich	Low_complexity	1	69	(0)	1618888
241	17.4	14.5	3.0	chr17	43953586	43953695	(39303746)	+	MIR1_Amn	SINE/MIR	48	175	(93)	1618915
16	15.9	0.0	0.0	chr17	44609306	44609333	(38648108)	+	(GT)n	Simple_repeat	1	28	(0)	1620315
14	19.5	2.3	2.3	chr17	44609373	44609415	(38648026)	+	(TGCATG)n	Simple_repeat	1	44	(0)	1620316
17	20.2	2.1	2.1	chr17	44656480	44656526	(38600915)	+	(GGC)n	Simple_repeat	1	48	(0)	1620447
472	27.6	2.8	2.2	chr17	44924118	44924295	(38333146)	C	MamRep434	DNA/TcMar-Tigger	(178)	248	70	1620996
1232	24.9	7.4	1.6	chr17	45429136	45429453	(37827988)	C	MER46C	DNA/TcMar-Tigger	(0)	338	1	1622032
29	20.6	0.0	1.6	chr17	49678022	49678084	(33579357)	+	(AC)n	Simple_repeat	1	63	(0)	1630372
18	24.8	0.0	1.9	chr17	49678139	49678192	(33579249)	+	(CCCCT)n	Simple_repeat	1	54	(0)	1630373
447	23.9	17.1	2.7	chr17	49910791	49910975	(33346466)	+	MIRc	SINE/MIR	28	244	(24)	1630803
13	21.9	1.7	6.6	chr17	50468814	50468873	(32788568)	+	(GGCTGG)n	Simple_repeat	1	61	(0)	1631846
189	29.7	8.4	15.6	chr17	50547442	50547788	(32709653)	+	L2c	LINE/L2	3056	3387	(0)	1632014
6342	17.4	6.7	2.5	chr17	60327418	60329098	(22928343)	+	MER52D	LTR/ERV1	55	2123	(0)	1649008
11	14.2	7.7	5.4	chr17	60421637	60421688	(22835753)	+	G-rich	Low_complexity	1	56	(0)	1649221
28	3.3	0.0	0.0	chr17	60422006	60422036	(22835405)	+	(CACCCAG)n	Simple_repeat	1	31	(0)	1649222
383	24.1	4.4	0.2	chr17	61395436	61395555	(21861886)	+	MIR3	SINE/MIR	31	150	(118)	1650996
33	0.0	0.0	2.8	chr17	63522999	63523034	(19734407)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1654861
23	28.3	3.8	1.8	chr17	63523162	63523267	(19734174)	+	GA-rich	Low_complexity	1	110	(0)	1654862
2029	9.7	7.0	0.0	chr17	63848520	63848797	(19408644)	+	AluSx	SINE/Alu	1	299	(13)	1655457
12	22.6	1.9	5.7	chr17	63848843	63848894	(19408547)	+	(CCAG)n	Simple_repeat	1	53	(0)	1655458
12	18.8	2.6	2.6	chr17	64146158	64146195	(19111246)	+	G-rich	Low_complexity	1	39	(0)	1656000
13	18.9	2.8	0.0	chr17	65561838	65561873	(17695568)	+	(CTCCTGC)n	Simple_repeat	1	37	(0)	1658892
17	28.0	1.4	4.0	chr17	67377442	67377515	(15879926)	+	(GGC)n	Simple_repeat	1	75	(0)	1661911
16	21.6	4.1	0.0	chr17	67378916	67378966	(15878475)	+	G-rich	Low_complexity	1	53	(0)	1661914
19	26.2	5.7	2.7	chr17	68101797	68101853	(15155588)	+	(GCCGCC)n	Simple_repeat	1	108	(0)	1663535
13	16.2	4.4	4.3	chr17	68101854	68101898	(15155543)	+	(CCGCC)n	Simple_repeat	1	47	(0)	1663536
24	20.3	0.9	9.2	chr17	68205304	68205411	(15052030)	+	(CGCGCCC)n	Simple_repeat	1	109	(0)	1663741
17	30.2	1.1	4.4	chr17	68247975	68248063	(15009378)	+	(GGCGC)n	Simple_repeat	1	90	(0)	1663830
13	19.1	0.0	0.0	chr17	68292140	68292169	(14965272)	+	(GCA)n	Simple_repeat	1	30	(0)	1663905
15	20.2	0.0	6.7	chr17	74852344	74852388	(8405053)	+	(CG)n	Simple_repeat	1	45	(0)	1674875
11	21.2	2.5	2.4	chr17	74852554	74852593	(8404848)	+	(GCAGCT)n	Simple_repeat	1	41	(0)	1674876
12	8.1	3.6	3.5	chr17	74852615	74852642	(8404799)	+	G-rich	Low_complexity	1	29	(0)	1674877
15	13.3	3.0	0.0	chr17	74893655	74893687	(8363754)	+	G-rich	Low_complexity	1	34	(0)	1674960
13	7.2	6.5	3.0	chr17	76080453	76080483	(7176958)	+	GA-rich	Low_complexity	1	33	(0)	1677349
14	8.6	10.8	0.0	chr17	76080498	76080540	(7176901)	+	(GGTGCAG)n	Simple_repeat	1	47	(0)	1677350
14	18.9	2.8	0.0	chr17	77528733	77528768	(5728673)	+	G-rich	Low_complexity	1	37	(0)	1680186
17	10.8	0.0	0.0	chr17	77529116	77529145	(5728296)	+	(GCTGG)n	Simple_repeat	1	30	(0)	1680187
1906	13.6	4.4	0.3	chr17	79294313	79294598	(3962843)	C	AluSx1	SINE/Alu	(13)	299	2	1683246
21	6.3	2.9	0.0	chr17	79742009	79742042	(3515399)	+	(CCCCTG)n	Simple_repeat	1	35	(0)	1683854
16	14.9	0.0	0.0	chr17	80147172	80147202	(3110239)	+	(ACGT)n	Simple_repeat	1	31	(0)	1684529
1276	15.0	0.7	13.8	chr18	12419939	12420117	(67953168)	+	AluJr	SINE/Alu	134	295	(17)	1707413
448	24.6	0.6	0.4	chr18	13822909	13823988	(66549297)	+	(CAAC)n	Simple_repeat	1	1086	(0)	1709568
13	4.7	4.5	0.0	chr18	24271698	24271719	(56101566)	+	(CCT)n	Simple_repeat	1	23	(0)	1717613
19	19.0	0.0	6.6	chr18	24397927	24397997	(55975288)	+	(CCCCG)n	Simple_repeat	1	66	(0)	1717870
51	2.1	0.0	0.0	chr18	26550558	26550605	(53822680)	+	(AC)n	Simple_repeat	1	48	(0)	1721102
894	14.5	0.0	0.8	chr18	35266997	35267113	(45106172)	+	AluJo	SINE/Alu	1	116	(196)	1733076
13	8.6	0.0	6.9	chr18	35972700	35972728	(44400557)	+	(GCG)n	Simple_repeat	1	29	(0)	1734074
55	0.0	0.0	0.0	chr18	37343330	37343376	(43029909)	+	(TG)n	Simple_repeat	1	47	(0)	1735917
12382	14.2	4.3	2.5	chr18	42592947	42596513	(37776772)	C	L1PA15-16	LINE/L1	(1779)	5070	1406	1743047
2339	6.8	0.0	0.7	chr18	42596514	42596791	(37776494)	C	AluSg	SINE/Alu	(34)	276	1	1743048
10957	16.9	4.8	1.1	chr18	42596792	42597940	(37775345)	C	L1PA15-16	LINE/L1	(5448)	1405	2	1743047
13	16.8	0.0	5.4	chr18	45837920	45837956	(34535329)	+	(CCCG)n	Simple_repeat	1	37	(0)	1747505
26	29.6	3.7	0.0	chr18	46433519	46433625	(33939660)	+	G-rich	Low_complexity	1	111	(0)	1748644
928	24.7	4.6	0.1	chr18	46769267	46769511	(33603774)	C	MIR	SINE/MIR	(1)	261	11	1749226
16	14.4	2.5	2.4	chr18	47930512	47930556	(32442729)	+	G-rich	Low_complexity	1	45	(0)	1751013
37	9.5	0.0	0.0	chr18	47930558	47930614	(32442671)	+	(GGGAG)n	Simple_repeat	1	57	(0)	1751014
19	12.8	0.0	0.0	chr18	47931271	47931304	(32441981)	+	(GGCGG)n	Simple_repeat	1	34	(0)	1751016
8006	15.9	2.9	2.7	chr18	48230827	48232204	(32141081)	+	MER52A	LTR/ERV1	375	1755	(0)	1751545
14	26.0	0.0	0.0	chr18	54269571	54269611	(26103674)	+	(GAC)n	Simple_repeat	1	41	(0)	1761009
19	5.8	5.3	2.5	chr18	57803350	57803387	(22569898)	+	(GCTGGG)n	Simple_repeat	1	40	(0)	1766212
2650	16.5	3.9	1.5	chr18	58496714	58497242	(21876043)	+	MER74A	LTR/ERVL	17	558	(0)	1767341
544	33.7	7.6	2.3	chr18	58944991	58945473	(21427812)	C	L1MC4	LINE/L1	(263)	7779	7269	1768166
363	23.8	0.0	1.2	chr18	59402832	59402912	(20970373)	C	MIRc	SINE/MIR	(107)	161	82	1768893
234	33.5	13.0	1.1	chr18	59402962	59403151	(20970134)	C	MIRb	SINE/MIR	(22)	246	31	1768894
11	15.8	6.5	4.1	chr18	59899637	59899682	(20473603)	+	(CCACTC)n	Simple_repeat	1	49	(0)	1769752
17	3.2	0.0	10.3	chr18	59899887	59899925	(20473360)	+	(GCGGG)n	Simple_repeat	1	39	(0)	1769753
4638	12.2	4.9	1.8	chr18	62323820	62324578	(18048707)	+	LTR39	LTR/ERV1	1	783	(0)	1773277
11	26.0	0.0	5.8	chr18	62526814	62526865	(17846420)	+	(CGGCCC)n	Simple_repeat	1	52	(0)	1773603
1005	20.7	0.9	0.9	chr18	63935891	63936109	(16437176)	+	L1MD3	LINE/L1	7776	7994	(1)	1775799
34	27.5	1.3	8.7	chr18	67516742	67516969	(12856316)	+	G-rich	Low_complexity	1	231	(0)	1780560
24	14.8	1.9	1.8	chr19	1275563	1275616	(57342000)	+	(TGCTGC)n	Simple_repeat	1	55	(0)	1798487
29	2.6	5.1	0.0	chr19	1592382	1592420	(57025196)	+	(CACG)n	Simple_repeat	1	41	(0)	1799091
15	21.8	0.0	5.7	chr19	1592422	1592474	(57025142)	+	G-rich	Low_complexity	1	53	(0)	1799092
732	18.6	1.8	1.8	chr19	2740424	2740587	(55877029)	+	L1MA8	LINE/L1	6029	6192	(99)	1801562
842	27.7	15.1	4.2	chr19	2983201	2983942	(55633674)	C	L2a	LINE/L2	(2)	3424	2570	1802087
22	27.1	1.1	4.2	chr19	3869029	3869056	(54748560)	+	(CCCCGCG)n	Simple_repeat	1	75	(21)	1804195
13	26.1	4.9	1.6	chr19	3869057	3869117	(54748499)	+	(CCCGC)n	Simple_repeat	1	64	(0)	1804196
22	27.1	1.1	4.2	chr19	3869118	3869123	(54748493)	+	(CCCCGCG)n	Simple_repeat	76	96	(0)	1804195
227	17.9	11.9	0.0	chr19	4305522	4305614	(54312002)	+	MIRc	SINE/MIR	37	152	(116)	1805324
12	20.8	1.7	8.3	chr19	5137860	5137918	(53479698)	+	(CCCAG)n	Simple_repeat	1	60	(0)	1807235
18	27.3	0.0	3.1	chr19	5340835	5340899	(53276717)	+	(CCG)n	Simple_repeat	1	65	(0)	1807706
19	21.2	0.0	0.0	chr19	5341053	5341096	(53276520)	+	(GGC)n	Simple_repeat	1	44	(0)	1807707
181	33.3	3.6	3.6	chr19	5536365	5536448	(53081168)	C	L2b	LINE/L2	(537)	2882	2799	1808287
12	16.3	2.8	2.7	chr19	6476009	6476044	(52141572)	+	(CCCAGTC)n	Simple_repeat	1	37	(0)	1810328
16	26.7	2.8	6.4	chr19	7920491	7920596	(50697020)	+	(AGCCGG)n	Simple_repeat	1	109	(0)	1813980
13	26.8	1.8	3.5	chr19	7925605	7925661	(50691955)	+	(CCT)n	Simple_repeat	1	58	(0)	1813983
12	20.9	5.8	5.5	chr19	8364233	8364301	(50253315)	+	(CCCCGAAT)n	Simple_repeat	1	73	(0)	1815145
390	27.7	4.3	0.0	chr19	10478848	10478959	(48138657)	C	MIR	SINE/MIR	(0)	262	146	1819859
157	28.6	1.1	0.2	chr19	10587498	10587944	(48029672)	+	(CATT)n	Simple_repeat	1	452	(0)	1820171
494	32.7	10.2	0.3	chr19	11482871	11483152	(47134464)	+	L2a	LINE/L2	2967	3279	(147)	1822442
635	25.7	4.6	0.5	chr19	12640510	12640696	(45976920)	+	AluJr	SINE/Alu	118	312	(0)	1824903
13	3.1	15.2	0.0	chr19	12801855	12801887	(45815729)	+	(CGGAG)n	Simple_repeat	1	38	(0)	1825239
13	24.4	2.2	2.1	chr19	17235853	17235898	(41381718)	+	(CCG)n	Simple_repeat	1	47	(0)	1835810
37	30.3	4.2	2.0	chr19	17236074	17236266	(41381350)	+	GA-rich	Low_complexity	1	201	(0)	1835811
12	18.1	0.0	3.0	chr19	17605990	17606050	(41011566)	+	(GCCCC)n	Simple_repeat	1	59	(0)	1836812
245	36.2	0.0	1.7	chr19	17868984	17869101	(40748515)	+	L2b	LINE/L2	2803	2918	(501)	1837478
760	23.5	0.7	0.0	chr19	17869114	17869262	(40748354)	C	AluJb	SINE/Alu	(40)	272	123	1837479
290	26.8	1.4	0.0	chr19	17869301	17869371	(40748245)	+	L2b	LINE/L2	3284	3355	(20)	1837478
12	17.4	0.0	8.7	chr19	18588917	18588962	(40028654)	+	G-rich	Low_complexity	1	46	(0)	1839178
227	35.5	4.2	3.7	chr19	19214940	19215103	(39402513)	+	MIR3	SINE/MIR	3	167	(41)	1840517
20	8.9	2.8	0.0	chr19	33777738	33777773	(24839843)	+	(AGGGCAG)n	Simple_repeat	1	37	(0)	1857291
222	31.6	11.4	4.1	chr19	33778034	33778155	(24839461)	C	MIR	SINE/MIR	(117)	145	14	1857292
825	13.7	0.0	0.8	chr19	34404033	34404156	(24213460)	+	FLAM_C	SINE/Alu	11	133	(10)	1858560
423	20.0	0.0	0.0	chr19	34404168	34404242	(24213374)	C	L1MC5a	LINE/L1	(635)	2142	2068	1858561
13	28.6	1.8	1.7	chr19	35755708	35755764	(22861852)	+	(GCCCC)n	Simple_repeat	1	58	(0)	1861077
1270	20.8	1.2	4.8	chr19	35828564	35828827	(22788789)	+	MER58B	DNA/hAT-Charlie	85	339	(2)	1861260
691	29.5	10.1	0.7	chr19	35829069	35829372	(22788244)	+	MLT1K	LTR/ERVL-MaLR	12	347	(248)	1861262
1724	14.1	0.7	1.8	chr19	36417941	36418217	(22199399)	C	AluJr	SINE/Alu	(38)	274	1	1862502
13	14.0	0.0	5.7	chr19	36605285	36605319	(22012297)	+	(GCGCAG)n	Simple_repeat	1	35	(0)	1862876
14	27.6	1.7	3.3	chr19	38870110	38870169	(19747447)	+	(GCC)n	Simple_repeat	1	61	(0)	1867628
12	15.2	5.0	7.9	chr19	38949903	38949962	(19667654)	+	(CCCGGC)n	Simple_repeat	1	63	(0)	1867815
2245	7.0	3.7	0.0	chr19	39391764	39392050	(19225566)	+	AluSz	SINE/Alu	13	310	(2)	1868985
448	27.1	16.4	0.0	chr19	40553842	40554029	(18063587)	+	MIR	SINE/MIR	15	239	(23)	1871399
27	5.5	0.0	0.0	chr19	40597140	40597177	(18020439)	+	(GGGCGG)n	Simple_repeat	1	38	(0)	1871496
2211	8.7	2.0	0.0	chr19	40662554	40662841	(17954775)	C	AluSx1	SINE/Alu	(17)	295	2	1871650
15	4.7	0.0	0.0	chr19	45152511	45152532	(13465084)	+	(CTG)n	Simple_repeat	1	22	(0)	1880570
18	29.9	0.0	5.7	chr19	45395895	45395982	(13221634)	+	G-rich	Low_complexity	1	88	(0)	1881196
19	24.5	4.4	5.9	chr19	45395983	45396002	(13221614)	+	GA-rich	Low_complexity	24	119	(0)	1881197
25	14.3	3.6	1.7	chr19	45498528	45498583	(13119033)	+	GA-rich	Low_complexity	1	58	(0)	1881471
12	13.3	2.7	5.3	chr19	45498864	45498900	(13118716)	+	(GCGAGC)n	Simple_repeat	1	38	(0)	1881472
12	26.9	0.0	0.0	chr19	45529173	45529212	(13088404)	+	(CGCCTG)n	Simple_repeat	1	40	(0)	1881545
16	13.0	2.9	0.0	chr19	45816008	45816041	(12801575)	+	G-rich	Low_complexity	1	35	(0)	1882322
13	11.1	2.1	10.2	chr19	46648854	46648901	(11968715)	+	G-rich	Low_complexity	1	49	(0)	1884194
13	22.4	0.0	4.4	chr19	46648965	46649009	(11968607)	+	(GGCGTG)n	Simple_repeat	1	45	(0)	1884195
2002	12.1	7.4	0.3	chr19	47242603	47242892	(11374724)	C	AluSq	SINE/Alu	(1)	312	1	1885630
30	29.3	0.8	5.3	chr19	47242925	47243056	(11374560)	+	(TG)n	Simple_repeat	1	133	(0)	1885631
1331	15.4	6.5	4.9	chr19	47778053	47778176	(10839440)	C	AluJb	SINE/Alu	(178)	134	2	1887043
17	11.6	0.0	7.0	chr19	47778598	47778640	(10838976)	+	(CCTCCGC)n	Simple_repeat	1	43	(0)	1887045
25	12.8	3.9	0.0	chr19	48716738	48716788	(9900828)	+	GA-rich	Low_complexity	1	53	(0)	1889456
2118	13.6	0.7	0.0	chr19	49454021	49454322	(9163294)	C	AluJb	SINE/Alu	(8)	304	1	1891125
526	24.4	4.7	0.0	chr19	50311125	50311310	(8306306)	C	MIR	SINE/MIR	(35)	233	29	1893253
2474	5.0	0.0	0.0	chr19	53592783	53593062	(5024554)	C	AluY	SINE/Alu	(31)	280	1	1899666
1876	21.1	5.6	3.1	chr19	53593063	53593333	(5024283)	C	L1PA15-16	LINE/L1	(5308)	1545	1270	1899651
587	35.1	0.6	9.0	chr19	53593309	53593506	(5024110)	C	L1P4b	LINE/L1	(5615)	1999	1809	1899667
2187	6.9	4.3	0.3	chr19	53809251	53809541	(4808075)	+	AluSc	SINE/Alu	1	303	(6)	1900309
612	11.7	2.4	1.3	chr19	55368979	55369203	(3248413)	C	MSR1	Satellite	(1)	227	1	1903594
11	27.4	1.6	4.8	chr19	56567606	56567667	(2049949)	+	(GCGTGC)n	Simple_repeat	1	63	(0)	1906004
19	15.9	2.4	0.0	chr19	56595157	56595198	(2022418)	+	(GCTCG)n	Simple_repeat	1	43	(0)	1906049
21	14.1	3.3	4.8	chr2	10043495	10043554	(232149975)	+	(CCGCC)n	Simple_repeat	1	62	(0)	1924068
11	11.7	7.3	4.5	chr2	10043901	10043941	(232149588)	+	G-rich	Low_complexity	1	44	(0)	1924069
17	18.1	0.0	7.0	chr2	10448011	10448067	(231745462)	+	(CCGCGGC)n	Simple_repeat	1	57	(0)	1924772
11	24.3	0.0	0.0	chr2	11482634	11482667	(230710862)	+	(CCGCCC)n	Simple_repeat	1	34	(0)	1926724
23	17.6	0.0	1.9	chr2	11482823	11482875	(230710654)	+	G-rich	Low_complexity	1	53	(0)	1926725
187	34.2	8.5	3.6	chr2	15808394	15808560	(226384969)	C	L2c	LINE/L2	(285)	3090	2915	1933344
274	27.4	2.7	0.0	chr2	15939438	15939510	(226254019)	C	MIR	SINE/MIR	(87)	175	101	1933617
13	16.9	0.0	8.5	chr2	17538994	17539040	(224654489)	+	(CCGCGCT)n	Simple_repeat	1	47	(0)	1936102
5336	12.1	13.0	9.7	chr2	20105982	20107080	(222086449)	C	LTR12D	LTR/ERV1	(113)	1141	1	1939766
2337	9.8	0.0	0.3	chr2	20107173	20107478	(222086051)	+	AluSc8	SINE/Alu	1	305	(6)	1939767
208	21.2	4.0	3.1	chr2	20650799	20650882	(221542647)	+	MIRc	SINE/MIR	90	179	(89)	1940694
14	10.3	3.0	2.9	chr2	20651130	20651162	(221542367)	+	(CCCTG)n	Simple_repeat	1	34	(0)	1940695
19	24.8	5.6	2.1	chr2	23940376	23940464	(218253065)	+	(GCGCCC)n	Simple_repeat	1	94	(0)	1945145
15	21.9	0.0	2.3	chr2	23940659	23940702	(218252827)	+	G-rich	Low_complexity	1	44	(0)	1945146
13	22.7	0.0	0.0	chr2	25342311	25342346	(216851183)	+	G-rich	Low_complexity	1	36	(0)	1947760
504	26.3	4.3	1.9	chr2	25342754	25342912	(216850617)	+	L3	LINE/CR1	3929	4091	(8)	1947761
12	18.9	7.1	0.0	chr2	26184741	26184782	(216008747)	+	(CGCTGG)n	Simple_repeat	1	45	(0)	1949502
12	23.0	0.0	4.5	chr2	28751965	28752008	(213441521)	+	G-rich	Low_complexity	1	44	(0)	1954159
14	14.2	3.2	0.0	chr2	28752047	28752077	(213441452)	+	(CGC)n	Simple_repeat	1	32	(0)	1954160
332	32.0	6.2	5.1	chr2	28811152	28811309	(213382220)	+	L1M4b	LINE/L1	458	617	(6250)	1954259
15	11.2	0.0	3.2	chr2	31138684	31138714	(211054815)	+	(GGGGC)n	Simple_repeat	1	31	(0)	1958027
16	22.7	3.5	1.7	chr2	32011040	32011097	(210182432)	+	(GGCGCAG)n	Simple_repeat	1	60	(0)	1959290
12	21.7	0.0	0.0	chr2	32039562	32039593	(210153936)	+	(CCCCGA)n	Simple_repeat	1	32	(0)	1959375
14	21.9	1.6	6.5	chr2	36356325	36356348	(205837181)	+	(CGGCTG)n	Simple_repeat	1	39	(23)	1965966
16	8.5	0.0	0.0	chr2	36356349	36356373	(205837156)	+	(GCT)n	Simple_repeat	1	25	(0)	1965967
14	21.9	1.6	6.5	chr2	36356374	36356385	(205837144)	+	(CGGCTG)n	Simple_repeat	40	62	(0)	1965966
12	15.8	0.0	3.3	chr2	38076214	38076243	(204117286)	+	(GGCGG)n	Simple_repeat	1	30	(0)	1968657
43	13.8	0.0	0.0	chr2	39779337	39779409	(202414120)	+	(GGGAGA)n	Simple_repeat	1	73	(0)	1971734
13	5.2	0.0	0.0	chr2	41837023	41837042	(200356487)	+	(TGG)n	Simple_repeat	1	20	(0)	1974493
487	30.4	1.9	1.2	chr2	41837187	41837346	(200356183)	+	MER5A	DNA/hAT-Charlie	1	161	(28)	1974494
332	27.9	7.6	5.4	chr2	42101709	42101837	(200091692)	+	MIRb	SINE/MIR	84	215	(53)	1974956
26	10.6	7.9	1.5	chr2	42492753	42492815	(199700714)	+	(GGACG)n	Simple_repeat	1	68	(0)	1975680
306	22.2	2.1	5.5	chr2	47369285	47369484	(194824045)	+	LTR41B	LTR/ERVL	252	444	(314)	1983926
13	17.9	7.4	3.5	chr2	48314247	48314300	(193879229)	+	(GCC)n	Simple_repeat	1	58	(0)	1985746
16	8.5	4.9	4.7	chr2	48314620	48314660	(193878869)	+	G-rich	Low_complexity	1	43	(0)	1985747
14	23.3	0.0	2.4	chr2	48314663	48314704	(193878825)	+	(TGC)n	Simple_repeat	1	42	(0)	1985748
12	16.5	0.0	0.0	chr2	48585745	48585771	(193607758)	+	(AGGC)n	Simple_repeat	1	27	(0)	1986264
9448	24.4	6.8	5.3	chr2	49490216	49492215	(192701314)	+	L1MA4A	LINE/L1	721	2777	(4789)	1987508
1436	22.1	5.7	2.0	chr2	49770832	49770966	(192422563)	+	MLT1A	LTR/ERVL-MaLR	1	139	(235)	1987867
6160	20.4	13.2	4.0	chr2	49770967	49771801	(192421728)	C	MER52A	LTR/ERV1	(0)	1755	880	1987868
38	16.8	4.6	0.0	chr2	51032140	51032226	(191161303)	+	GA-rich	Low_complexity	1	91	(0)	1989561
50	0.0	0.0	0.0	chr2	51032511	51032553	(191160976)	+	(AG)n	Simple_repeat	1	43	(0)	1989562
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
195	35.3	6.1	5.0	chr2	58447859	58448216	(183745313)	+	L2c	LINE/L2	2488	2849	(570)	1999794
480	33.7	12.3	0.3	chr2	58448198	58448489	(183745040)	+	L2c	LINE/L2	3056	3387	(0)	1999794
3035	20.0	8.5	2.4	chr2	62072158	62073064	(180120465)	+	LTR2752	LTR/ERV1	1	1696	(59)	2005791
202	21.7	2.8	9.2	chr2	63059414	63059489	(179134040)	+	MIR	SINE/MIR	60	130	(132)	2007381
328	33.6	8.8	9.1	chr2	63059510	63059784	(179133745)	C	L1M4b	LINE/L1	(6375)	492	219	2007382
906	12.6	0.0	0.0	chr2	65055512	65055630	(177137899)	+	AluJo	SINE/Alu	5	123	(189)	2010492
24	17.1	4.3	2.8	chr2	70994826	70994894	(171198635)	+	(GCC)n	Simple_repeat	1	72	(0)	2019949
18	25.4	1.8	0.0	chr2	73269059	73269125	(168924404)	+	G-rich	Low_complexity	1	68	(0)	2023421
243	32.1	6.1	2.4	chr2	74424514	74424689	(167768840)	+	MIR3	SINE/MIR	34	216	(52)	2025374
14	23.9	0.0	6.6	chr2	74516017	74516077	(167677452)	+	(GCCGCT)n	Simple_repeat	1	61	(0)	2025517
13	8.3	0.0	6.7	chr2	74648174	74648203	(167545326)	+	(GCCCA)n	Simple_repeat	1	30	(0)	2025726
14	8.4	0.0	3.7	chr2	74958682	74958708	(167234821)	+	(GGC)n	Simple_repeat	1	27	(0)	2026250
13	19.6	7.4	1.7	chr2	102619492	102619545	(139573984)	+	(GCGCC)n	Simple_repeat	1	58	(0)	2061316
300	16.4	4.3	5.6	chr2	102619870	102619940	(139573589)	C	L1MD2	LINE/L1	(6069)	478	409	2061317
13	18.4	7.0	0.0	chr2	106065663	106065705	(136127824)	+	(CCCGCG)n	Simple_repeat	1	46	(0)	2065865
7400	15.3	10.3	4.5	chr2	106584245	106585726	(135607803)	+	LTR12C	LTR/ERV1	2	1579	(0)	2066718
48	25.5	2.9	4.7	chr2	108534262	108534469	(133659060)	+	(CGCCC)n	Simple_repeat	1	214	(0)	2069392
185	31.2	12.4	9.4	chr2	109002355	109002651	(133190878)	+	L2c	LINE/L2	2678	2984	(435)	2070109
18	9.6	6.2	3.9	chr2	109614268	109614315	(132579214)	+	G-rich	Low_complexity	1	51	(0)	2070958
180	28.5	8.9	3.1	chr2	112181575	112181701	(130011828)	+	L2b	LINE/L2	3213	3347	(28)	2074679
709	26.6	9.9	6.0	chr2	119106196	119106429	(123087100)	+	MIR	SINE/MIR	4	251	(17)	2084702
682	27.4	9.6	2.2	chr2	119106566	119106796	(123086733)	C	MIRb	SINE/MIR	(15)	253	4	2084703
182	25.0	3.7	0.0	chr2	119679438	119679489	(122514040)	+	MIRc	SINE/MIR	91	144	(124)	2085746
8901	17.7	7.8	3.2	chr2	119794229	119796243	(122397286)	C	MER52D	LTR/ERV1	(0)	2123	9	2085980
341	24.9	18.0	0.6	chr2	120443232	120443405	(121750124)	+	MIR	SINE/MIR	38	248	(14)	2086976
198	16.9	9.2	0.0	chr2	127087363	127087421	(115106108)	+	MamTip2	DNA/hAT-Tip100	62	126	(179)	2096853
29	18.9	1.1	5.7	chr2	128027619	128027705	(114165824)	+	(CCGC)n	Simple_repeat	1	88	(0)	2098508
17	10.0	3.1	0.0	chr2	128322219	128322270	(113871259)	+	(GGCCCC)n	Simple_repeat	1	53	(0)	2099035
13	11.1	3.2	3.1	chr2	135876443	135876473	(106317056)	+	(CGC)n	Simple_repeat	1	32	(0)	2109773
13	23.8	2.2	2.1	chr2	138780391	138780436	(103413093)	+	G-rich	Low_complexity	1	47	(0)	2113952
4104	12.7	4.3	6.7	chr2	146412731	146413533	(95779996)	C	LTR1	LTR/ERV1	(0)	783	1	2123885
1204	20.9	9.9	3.3	chr2	148813727	148814121	(93379408)	+	MER74A	LTR/ERVL	62	485	(73)	2127179
1861	14.4	0.3	6.1	chr2	148814128	148814454	(93379075)	+	AluJb	SINE/Alu	2	309	(3)	2127180
26	17.8	0.0	3.3	chr2	152098885	152098945	(90094584)	+	GA-rich	Low_complexity	1	61	(0)	2131855
15	8.8	5.0	4.8	chr2	156436293	156436332	(85757197)	+	G-rich	Low_complexity	1	42	(0)	2137474
21	16.8	1.4	7.1	chr2	159798202	159798270	(82395259)	+	G-rich	Low_complexity	1	70	(0)	2142174
14	11.9	8.1	0.0	chr2	162344146	162344182	(79849347)	+	(CCTGCA)n	Simple_repeat	1	40	(0)	2145594
27	21.4	2.0	5.8	chr2	164621483	164621593	(77571936)	+	G-rich	Low_complexity	1	106	(0)	2148539
982	30.4	7.7	4.5	chr2	165282218	165282591	(76910938)	+	MER45C	DNA/hAT-Tip100	511	899	(54)	2149472
15	17.9	0.0	4.8	chr2	165794145	165794186	(76399343)	+	(CTCCGC)n	Simple_repeat	1	42	(0)	2150134
36	0.0	0.0	0.0	chr2	165953652	165953685	(76239844)	+	(CCCGCTCA)n	Simple_repeat	1	34	(0)	2150388
3509	18.5	2.9	1.6	chr2	167406277	167406953	(74786576)	+	L1MA4	LINE/L1	2	687	(4641)	2152163
9711	16.2	3.9	2.4	chr2	167406954	167408015	(74785514)	+	L1MA4	LINE/L1	2782	3870	(2455)	2152163
14	13.1	9.5	0.0	chr2	168456095	168456136	(73737393)	+	(TGCGCCC)n	Simple_repeat	1	46	(0)	2153583
28	14.8	0.0	1.9	chr2	168456296	168456349	(73737180)	+	(GCG)n	Simple_repeat	1	54	(0)	2153584
25073	6.6	0.5	0.4	chr2	172264706	172270864	(69922665)	C	L1PA6	LINE/L1	(1)	6153	6	2159896
196	28.6	6.7	3.9	chr2	174771891	174771992	(67421537)	+	L2	LINE/L2	65	169	(3250)	2163820
405	29.0	4.3	3.1	chr2	174888547	174888706	(67304823)	+	L1MB2	LINE/L1	245	406	(5907)	2163962
23	15.6	3.2	4.6	chr2	175005224	175005286	(67188243)	+	(GGC)n	Simple_repeat	1	65	(0)	2164159
22613	11.6	1.6	1.8	chr2	181410807	181417280	(60776249)	+	L1PA8A	LINE/L1	1	6446	(0)	2172709
3505	8.9	0.4	0.2	chr2	187510490	187510951	(54682578)	+	LTR2	LTR/ERV1	1	463	(0)	2180479
20462	12.2	4.9	4.1	chr2	187510952	187515862	(54677667)	+	Harlequin-int	LTR/ERV1	1	5069	(1827)	2180479
17	3.2	5.9	2.8	chr2	189784481	189784514	(52409015)	+	(GCGGGT)n	Simple_repeat	1	36	(0)	2183366
395	21.9	10.4	4.2	chr2	191019976	191020190	(51173339)	+	L1ME4a	LINE/L1	5819	6048	(76)	2185240
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
1741	18.3	0.9	2.0	chr2	195694832	195695176	(46498353)	C	MER61A	LTR/ERV1	(0)	341	1	2191349
3763	13.9	20.9	1.7	chr2	195695177	195695560	(46497969)	C	L1PB1	LINE/L1	(5857)	1006	625	2191348
11	11.1	6.9	0.0	chr2	196171041	196171069	(46022460)	+	(CACACG)n	Simple_repeat	1	31	(0)	2192006
2294	8.2	18.7	0.5	chr2	197587359	197587726	(44605803)	+	LTR7	LTR/ERV1	1	450	(0)	2194325
11707	19.8	2.7	1.7	chr2	197667285	197669117	(44524412)	C	L1MA4A	LINE/L1	(4948)	2618	775	2194445
21	14.3	2.1	2.0	chr2	197705241	197705288	(44488241)	+	(GGCGG)n	Simple_repeat	1	49	(0)	2194511
10909	12.6	1.2	0.1	chr2	198984831	198986441	(43207088)	C	MSTA-int	LTR/ERVL-MaLR	(2)	1629	2	2196263
18	12.2	6.4	2.0	chr2	199911313	199911359	(42282170)	+	(CGCCGGC)n	Simple_repeat	1	50	(0)	2197519
13	29.3	0.0	0.0	chr2	199911453	199911494	(42282035)	+	(GCT)n	Simple_repeat	1	42	(0)	2197520
315	25.4	6.3	8.5	chr2	199955997	199956125	(42237404)	+	L1MDb	LINE/L1	649	774	(5635)	2197597
20	11.8	0.0	2.6	chr2	200510168	200510206	(41683323)	+	(GCCAC)n	Simple_repeat	1	39	(0)	2198448
265	28.4	11.0	2.6	chr2	200510338	200510468	(41683061)	C	MIRc	SINE/MIR	(121)	147	6	2198449
308	30.2	3.5	2.4	chr2	201972508	201972650	(40220879)	C	MIRb	SINE/MIR	(27)	241	92	2200947
13	20.8	0.0	0.0	chr2	203328209	203328241	(38865288)	+	G-rich	Low_complexity	1	33	(0)	2203790
15	14.3	0.0	3.0	chr2	204545554	204545586	(37647943)	+	(CGC)n	Simple_repeat	1	33	(0)	2205785
13	26.8	1.6	4.7	chr2	205682309	205682371	(36511158)	+	(GCCGC)n	Simple_repeat	1	64	(0)	2207282
21	19.8	0.0	0.0	chr2	205682634	205682679	(36510850)	+	(CAG)n	Simple_repeat	1	46	(0)	2207283
1187	9.4	0.6	2.4	chr2	207626385	207626587	(34566942)	C	AluSx	SINE/Alu	(0)	312	127	2210338
700	16.9	13.4	0.0	chr2	209305598	209305737	(32887792)	C	MSTA	LTR/ERVL-MaLR	(0)	428	267	2212846
4333	18.1	2.9	1.2	chr2	209305738	209306210	(32887319)	C	MER52A	LTR/ERV1	(0)	1755	1280	2212847
4333	19.1	9.8	2.9	chr2	209306971	209307949	(32885580)	C	MER52A	LTR/ERV1	(476)	1279	204	2212847
14	13.2	2.9	2.8	chr2	209771905	209771939	(32421590)	+	G-rich	Low_complexity	1	36	(0)	2213450
239	28.8	5.3	1.6	chr2	214809057	214809183	(27384346)	+	MER5A	DNA/hAT-Charlie	58	189	(0)	2220125
17	14.2	0.0	0.0	chr2	216372298	216372328	(25821201)	+	(CCG)n	Simple_repeat	1	31	(0)	2222623
2526	5.8	0.0	1.0	chr2	218388088	218388396	(23805133)	+	AluSc	SINE/Alu	1	306	(3)	2226012
18	12.1	2.8	0.0	chr2	218568343	218568378	(23625151)	+	(CACG)n	Simple_repeat	1	37	(0)	2226392
15	7.5	0.0	6.2	chr2	218568413	218568444	(23625085)	+	(CCGCC)n	Simple_repeat	1	32	(0)	2226393
12	12.6	2.5	7.3	chr2	219294869	219294908	(22898621)	+	(AGGCCC)n	Simple_repeat	1	41	(0)	2227663
43	4.5	0.0	0.0	chr2	219359212	219359257	(22834272)	+	(AC)n	Simple_repeat	1	46	(0)	2227777
13	29.0	0.0	0.0	chr2	219544109	219544154	(22649375)	+	(GCCCCT)n	Simple_repeat	1	46	(0)	2228104
12	22.7	0.0	8.3	chr2	219552938	219552997	(22640532)	+	(GGAGCC)n	Simple_repeat	1	60	(0)	2228111
221	30.2	8.5	5.6	chr2	219569975	219570100	(22623429)	+	MER5A	DNA/hAT-Charlie	14	143	(46)	2228140
336	32.1	7.6	8.6	chr2	220504795	220505261	(21688268)	C	L2c	LINE/L2	(2)	3385	2924	2229627
4502	13.1	3.1	0.3	chr2	220748879	220749576	(21443953)	+	L1P3b	LINE/L1	54	771	(5104)	2230010
12	6.8	9.1	2.8	chr2	222671590	222671622	(19521907)	+	(CCCAG)n	Simple_repeat	1	36	(0)	2232961
273	28.1	8.6	7.1	chr2	224433640	224433823	(17759706)	+	L2c	LINE/L2	2977	3163	(224)	2235924
13	21.1	0.0	8.6	chr2	230068523	230068580	(12124949)	+	(GGCCCGC)n	Simple_repeat	1	58	(0)	2244681
286	30.5	1.0	2.1	chr2	231388135	231388231	(10805298)	+	MIRc	SINE/MIR	121	216	(52)	2246784
203	38.2	1.6	0.0	chr2	231514960	231515082	(10678447)	C	MIRb	SINE/MIR	(34)	234	110	2247034
13	11.0	9.8	2.2	chr2	231662447	231662487	(10531042)	+	(CCGCT)n	Simple_repeat	1	45	(0)	2247398
245	32.6	0.0	6.3	chr2	231678844	231678938	(10514591)	+	MIR	SINE/MIR	135	223	(39)	2247425
302	22.4	1.2	6.6	chr2	231678897	231678987	(10514542)	C	MIR1_Amn	SINE/MIR	(26)	204	119	2247426
12	18.3	5.4	0.0	chr2	231708162	231708198	(10485331)	+	G-rich	Low_complexity	1	39	(0)	2247478
13	21.8	0.0	0.0	chr2	231712441	231712473	(10481056)	+	(AGATGA)n	Simple_repeat	1	33	(0)	2247483
13	27.2	3.1	3.0	chr2	232633534	232633598	(9559931)	+	(CCGC)n	Simple_repeat	1	67	(0)	2249014
21	12.8	6.2	4.3	chr2	232633636	232633700	(9559829)	+	(CGCGTCC)n	Simple_repeat	1	69	(0)	2249015
21	18.8	3.3	7.5	chr2	232633795	232633885	(9559644)	+	(GCCCGA)n	Simple_repeat	1	94	(0)	2249016
12	26.4	3.6	1.7	chr2	232876750	232876805	(9316724)	+	(CGGCCA)n	Simple_repeat	1	58	(0)	2249492
1396	23.1	7.4	1.4	chr2	233050719	233051074	(9142455)	+	MLT1B	LTR/ERVL-MaLR	12	390	(0)	2249804
823	17.9	1.8	1.8	chr2	233913044	233913208	(8280321)	+	MER5A1	DNA/hAT-Charlie	1	165	(1)	2251118
13	25.4	0.0	5.7	chr2	237475331	237475383	(4718146)	+	G-rich	Low_complexity	1	53	(0)	2256409
18	16.4	7.1	5.6	chr2	237487290	237487373	(4706156)	+	(CGCCCTG)n	Simple_repeat	1	90	(0)	2256427
389	23.0	6.8	4.3	chr2	240831969	240832154	(1361375)	+	L1MEd	LINE/L1	1146	1336	(5750)	2260429
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
29	29.1	1.3	5.2	chr2	241218397	241218547	(974982)	+	(GGCGG)n	Simple_repeat	1	153	(0)	2260835
13	24.2	1.9	3.8	chr20	324509	324560	(64119607)	+	(CGCCC)n	Simple_repeat	1	53	(0)	2262662
182	17.0	2.1	2.1	chr20	2006063	2006110	(62438057)	C	L2b	LINE/L2	(0)	3375	3328	2266090
32	7.4	0.0	0.0	chr20	2652733	2652775	(61791392)	+	(GGGCCT)n	Simple_repeat	1	43	(0)	2267367
202	22.7	1.5	14.3	chr20	2756247	2756323	(61687844)	C	MIR3	SINE/MIR	(28)	180	114	2267531
72	32.7	0.4	0.8	chr20	2800073	2800312	(61643855)	+	(GT)n	Simple_repeat	1	241	(0)	2267614
2301	6.4	0.3	7.4	chr20	3160066	3160391	(61283776)	+	AluSx	SINE/Alu	3	305	(7)	2268330
12	18.6	2.1	6.1	chr20	3767755	3767802	(60676365)	+	(GCCCCC)n	Simple_repeat	1	49	(0)	2269453
13	24.0	1.4	8.0	chr20	4249526	4249599	(60194568)	+	(CCCTCC)n	Simple_repeat	1	75	(0)	2270439
19	16.4	7.9	1.5	chr20	4249705	4249767	(60194400)	+	(CTGCGGA)n	Simple_repeat	1	68	(0)	2270440
521	13.4	2.4	0.0	chr20	5119169	5119250	(59324917)	+	FLAM_A	SINE/Alu	44	127	(15)	2272054
21714	13.5	1.6	1.2	chr20	8382847	8385971	(56058196)	C	L1PA8A	LINE/L1	(3305)	3156	2	2277168
13	26.5	1.6	4.6	chr20	10219528	10219591	(54224576)	+	G-rich	Low_complexity	1	65	(0)	2280188
18	19.5	2.7	6.7	chr20	10219592	10219597	(54224570)	+	(GCGG)n	Simple_repeat	4	75	(0)	2280189
250	25.0	2.8	1.9	chr20	18381042	18381147	(46063020)	+	MLT2F	LTR/ERVL	206	312	(351)	2292576
321	26.5	15.5	1.4	chr20	18381162	18381514	(46062653)	+	LTR16	LTR/ERVL	1	438	(0)	2292577
22	24.3	0.0	1.6	chr20	25247981	25248041	(39196126)	+	(CCCGC)n	Simple_repeat	1	61	(0)	2301899
13	18.7	0.0	5.0	chr20	31861238	31861277	(32582890)	+	(GGACGC)n	Simple_repeat	1	40	(0)	2307038
198	33.8	3.6	0.0	chr20	31935382	31935461	(32508706)	C	MIR3	SINE/MIR	(78)	130	48	2307226
322	29.8	3.2	5.5	chr20	32811697	32811824	(31632343)	+	MIRb	SINE/MIR	143	267	(1)	2309317
11	25.6	5.0	1.6	chr20	32811881	32811923	(31632244)	+	(TAGTAA)n	Simple_repeat	1	44	(0)	2309318
1649	15.6	1.8	3.5	chr20	32811924	32812211	(31631956)	+	AluJb	SINE/Alu	1	283	(29)	2309319
17	8.5	2.3	6.8	chr20	33667260	33667302	(30776865)	+	G-rich	Low_complexity	1	44	(0)	2311305
11	21.1	2.5	2.4	chr20	33667534	33667573	(30776594)	+	(GGCGCG)n	Simple_repeat	1	41	(0)	2311306
704	27.1	7.0	1.8	chr20	33685523	33685740	(30758427)	+	MIR	SINE/MIR	33	262	(0)	2311336
13	12.1	5.0	4.8	chr20	35601756	35601795	(28842372)	+	G-rich	Low_complexity	1	42	(0)	2315649
2623	4.1	0.0	2.8	chr20	36383694	36384013	(28060154)	+	AluYk3	SINE/Alu	1	311	(0)	2317490
101	25.0	1.2	0.0	chr20	37412067	37412311	(27031856)	+	(GT)n	Simple_repeat	1	248	(0)	2319980
224	20.8	4.0	0.0	chr20	37627081	37627128	(26817039)	+	MIR3	SINE/MIR	152	201	(7)	2320432
31	38.3	0.6	2.9	chr20	40274953	40275124	(24169043)	+	(TG)n	Simple_repeat	1	173	(0)	2325481
304	31.7	8.0	10.3	chr20	41340247	41340489	(23103678)	C	L2b	LINE/L2	(18)	3357	3121	2327403
1721	22.8	5.6	2.0	chr20	41572077	41572470	(22871697)	+	LTR41B	LTR/ERVL	1	409	(349)	2327730
733	24.5	1.9	0.6	chr20	41572655	41572814	(22871353)	+	LTR41B	LTR/ERVL	425	586	(172)	2327730
2637	6.2	0.0	0.0	chr20	41572918	41573208	(22870959)	C	AluY	SINE/Alu	(20)	291	1	2327731
212	35.8	1.2	3.6	chr20	44248427	44248510	(20195657)	C	MIR3	SINE/MIR	(37)	171	90	2333008
16	16.9	1.9	5.7	chr20	45824131	45824182	(18619985)	+	G-rich	Low_complexity	1	53	(0)	2336296
30	0.0	7.7	0.0	chr20	45834377	45834415	(18609752)	+	(CGAGGACGA)n	Simple_repeat	1	42	(0)	2336327
232	28.2	9.0	0.0	chr20	46013858	46013928	(18430239)	C	MER91A	DNA/hAT-Tip100	(3)	193	116	2336782
310	34.7	12.9	1.4	chr20	58619581	58619855	(5824312)	C	L2a	LINE/L2	(5)	3421	3111	2363249
16	15.2	2.5	2.4	chr20	62228465	62228504	(2215663)	+	(ACGAGG)n	Simple_repeat	1	41	(0)	2368315
26	29.9	1.3	6.3	chr20	63006392	63006547	(1437620)	+	(CGC)n	Simple_repeat	1	158	(0)	2369180
195	31.4	5.5	7.5	chr20	63070129	63070221	(1373946)	C	L3	LINE/CR1	(1763)	2336	2246	2369242
12	5.6	0.0	0.0	chr21	17612698	17612716	(29097267)	+	(CCG)n	Simple_repeat	1	19	(0)	2381936
12	16.6	0.0	0.0	chr21	17819157	17819183	(28890800)	+	(GTCC)n	Simple_repeat	1	27	(0)	2382241
437	28.4	18.1	0.9	chr21	39644681	39644890	(7065093)	C	MIRb	SINE/MIR	(7)	261	8	2414948
246	27.7	3.1	4.1	chr22	17257009	17257106	(33561362)	C	MIR3	SINE/MIR	(166)	102	6	2428584
228	30.1	8.9	0.8	chr22	24591913	24592036	(26226432)	+	MIR3	SINE/MIR	5	139	(69)	2440310
410	27.4	12.1	3.4	chr22	26484073	26484276	(24334192)	+	MIRb	SINE/MIR	33	256	(12)	2444423
13	18.4	2.1	6.1	chr22	26648392	26648441	(24170027)	+	G-rich	Low_complexity	1	47	(0)	2444850
2461	6.3	0.3	0.0	chr22	28680332	28680630	(22137838)	C	AluY	SINE/Alu	(11)	300	1	2448923
21	27.6	0.0	5.4	chr22	28800218	28800309	(22018159)	+	(CCCAGC)n	Simple_repeat	1	92	(0)	2449228
19	18.5	2.0	1.9	chr22	28800537	28800587	(22017881)	+	(CGCGC)n	Simple_repeat	1	52	(0)	2449229
1779	13.3	1.1	2.8	chr22	29470710	29470994	(21347474)	C	AluJb	SINE/Alu	(27)	285	6	2450638
11	25.3	0.0	5.8	chr22	29580899	29580950	(21237518)	+	(CAGCCC)n	Simple_repeat	1	52	(0)	2450909
1062	32.3	9.3	2.0	chr22	30732332	30733221	(20085247)	C	ERVL-B4-int	LTR/ERVL	(616)	5141	4179	2453290
16	7.8	0.0	3.5	chr22	30802854	30802882	(20015586)	+	(GGCG)n	Simple_repeat	1	29	(0)	2453437
21	17.4	2.2	0.0	chr22	30803073	30803118	(20015350)	+	(GCG)n	Simple_repeat	1	47	(0)	2453438
14	16.4	2.9	0.0	chr22	31212128	31212161	(19606307)	+	(GCCAGA)n	Simple_repeat	1	35	(0)	2454271
13	21.7	3.4	4.9	chr22	31212162	31212220	(19606248)	+	G-rich	Low_complexity	1	61	(0)	2454272
3206	25.1	6.8	5.5	chr22	32203087	32206587	(18611881)	C	REP522	Satellite/telo	(94)	3546	1	2456556
1381	18.8	6.5	2.1	chr22	35539493	35539829	(15278639)	+	MER113	DNA/hAT-Charlie	121	473	(48)	2463255
12	11.3	6.9	0.0	chr22	36028709	36028737	(14789731)	+	(CCCGC)n	Simple_repeat	1	31	(0)	2464175
17	17.9	2.6	0.0	chr22	36028932	36028970	(14789498)	+	G-rich	Low_complexity	1	40	(0)	2464176
573	24.7	5.6	0.1	chr22	36410641	36410804	(14407664)	+	MIRc	SINE/MIR	47	210	(52)	2464956
576	20.9	5.6	1.3	chr22	36608742	36608896	(14209572)	+	MIR	SINE/MIR	101	262	(0)	2465465
14	8.4	2.1	10.4	chr22	37419889	37419935	(13398533)	+	(GCCCC)n	Simple_repeat	1	48	(0)	2467180
17	10.7	0.0	0.0	chr22	37457830	37457859	(13360609)	+	(AATG)n	Simple_repeat	1	30	(0)	2467279
417	35.3	6.0	2.2	chr22	37808359	37808581	(13009887)	C	MIRb	SINE/MIR	(0)	268	37	2468120
16	13.7	11.8	2.6	chr22	37825269	37825336	(12993132)	+	(CCGTCG)n	Simple_repeat	1	76	(0)	2468152
33	24.3	0.0	0.0	chr22	38350876	38350954	(12467514)	+	(ATG)n	Simple_repeat	1	79	(0)	2469337
17	16.7	0.0	0.0	chr22	38682063	38682096	(12136372)	+	GA-rich	Low_complexity	1	34	(0)	2470102
30	0.0	5.7	0.0	chr22	39399587	39399621	(11418847)	+	(ACA)n	Simple_repeat	1	37	(0)	2471577
533	26.0	16.1	0.7	chr22	39533980	39534201	(11284267)	C	MIR	SINE/MIR	(0)	262	9	2471836
270	28.4	4.7	6.4	chr22	40209407	40209515	(10608953)	+	MIRb	SINE/MIR	26	132	(136)	2473133
308	28.1	1.0	3.7	chr22	40209618	40209724	(10608744)	+	MIRb	SINE/MIR	72	175	(93)	2473134
2330	10.6	0.0	0.0	chr22	40209739	40210039	(10608429)	+	AluSg7	SINE/Alu	1	301	(8)	2473135
15	23.0	1.6	4.8	chr22	40346732	40346792	(10471676)	+	G-rich	Low_complexity	1	62	(0)	2473378
13	23.6	0.0	0.0	chr22	40636655	40636689	(10181779)	+	(CGC)n	Simple_repeat	1	35	(0)	2473972
215	23.8	4.9	4.2	chr22	41285725	41285809	(9532659)	+	MIRc	SINE/MIR	69	150	(80)	2475552
2229	9.0	1.0	1.7	chr22	41947368	41947668	(8870800)	C	AluSz	SINE/Alu	(13)	299	1	2477108
16	6.7	2.9	5.6	chr22	41957929	41957963	(8860505)	+	(CGCC)n	Simple_repeat	1	36	(0)	2477140
2431	6.4	0.7	0.0	chr22	42509965	42510261	(8308207)	C	AluY	SINE/Alu	(12)	299	1	2478248
888	25.2	4.8	8.8	chr22	42510262	42510312	(8308156)	+	L1MB8	LINE/L1	6112	6161	(17)	2478247
13	12.0	0.0	3.5	chr22	42510444	42510472	(8307996)	+	(AGCTG)n	Simple_repeat	1	29	(0)	2478249
8235	5.6	2.0	0.0	chr22	42551535	42552521	(8265947)	C	LTR13	LTR/ERVK	(0)	1007	1	2478356
2498	5.1	0.0	0.0	chr22	42553160	42553452	(8265016)	C	AluYe5	SINE/Alu	(17)	293	1	2478361
180	26.9	6.3	11.9	chr22	42553453	42553547	(8264921)	C	L2b	LINE/L2	(16)	3359	3265	2478360
316	27.9	12.0	5.5	chr22	43385994	43386156	(7432312)	+	MIRb	SINE/MIR	52	226	(42)	2480137
211	31.6	8.4	3.9	chr22	43812772	43812873	(7005595)	+	L2b	LINE/L2	3269	3375	(0)	2480823
620	23.6	10.2	6.0	chr22	43812946	43813179	(7005289)	C	MIR	SINE/MIR	(16)	246	2	2480824
181	24.8	9.8	10.6	chr22	43955786	43955898	(6862570)	C	MIR3	SINE/MIR	(78)	130	19	2481086
105	35.9	0.5	0.3	chr22	44146074	44146461	(6672007)	+	(CACA)n	Simple_repeat	1	390	(0)	2481434
229	31.7	0.0	5.8	chr22	44148046	44148132	(6670336)	+	UCON29	DNA/PiggyBac?	1	82	(357)	2481436
1485	19.4	14.4	0.5	chr22	44491718	44492163	(6326305)	+	Charlie1b	DNA/hAT-Charlie	1	519	(4)	2482057
193	28.7	1.3	0.0	chr22	44492301	44492362	(6326106)	C	L2a	LINE/L2	(8)	3418	3344	2482058
469	25.0	0.0	3.4	chr22	44492375	44492514	(6325954)	C	L2a	LINE/L2	(8)	3418	3240	2482058
2024	13.7	0.0	1.4	chr22	44975885	44976177	(5842291)	+	AluJb	SINE/Alu	1	289	(23)	2482976
207	27.8	5.6	3.4	chr22	46131409	46131541	(4686927)	C	L2c	LINE/L2	(282)	3105	2966	2485037
199	33.6	1.7	4.9	chr22	46627441	46627562	(4190906)	C	L2b	LINE/L2	(11)	3364	3247	2485823
354	22.4	0.0	1.3	chr22	48629613	48629689	(2188779)	+	MER20	DNA/hAT-Charlie	8	83	(136)	2488453
206	24.7	0.0	1.9	chr22	50271032	50271092	(547376)	+	L2b	LINE/L2	3125	3181	(194)	2490388
29	22.8	4.4	5.0	chr22	50481615	50481749	(336719)	+	(CGCCCG)n	Simple_repeat	1	141	(0)	2490731
13	13.1	2.7	5.3	chr22	50600509	50600551	(217917)	+	(GCCC)n	Simple_repeat	1	41	(0)	2490937
255	29.5	0.0	1.0	chr3	8321077	8321172	(189974387)	C	MLT1H2	LTR/ERVL-MaLR	(4)	485	391	2505161
305	22.2	12.7	2.6	chr3	8321331	8321490	(189974069)	C	MLT1H2	LTR/ERVL-MaLR	(388)	161	2	2505161
915	16.8	2.1	0.5	chr3	8499532	8499722	(189795837)	+	L1MA4A	LINE/L1	5950	6143	(160)	2505471
2016	13.7	0.0	0.0	chr3	8499723	8500000	(189795559)	+	AluSz	SINE/Alu	1	278	(34)	2505472
323	25.4	12.1	1.4	chr3	10816917	10817056	(187478503)	C	MIRb	SINE/MIR	(14)	254	98	2510176
12083	18.9	11.3	0.8	chr3	18294816	18296365	(179999194)	+	L1MA4A	LINE/L1	721	2550	(5016)	2523140
18188	15.7	2.1	1.8	chr3	19407350	19411763	(178883796)	+	L1PA16	LINE/L1	709	5097	(1752)	2524646
2097	9.9	2.2	0.4	chr3	22563960	22564232	(175731327)	+	AluSx	SINE/Alu	1	278	(34)	2528904
2351	19.9	0.5	4.3	chr3	22691287	22691753	(175603806)	C	MLT2B1	LTR/ERVL	(71)	449	1	2529071
23833	7.3	1.0	0.1	chr3	23030418	23036543	(175259016)	C	L1PA6	LINE/L1	(1)	6338	1	2529551
16	14.2	0.0	0.0	chr3	27484180	27484224	(170811335)	+	(CTGCCG)n	Simple_repeat	1	45	(0)	2536145
16	27.1	4.5	3.2	chr3	27484236	27484324	(170811235)	+	(CGTG)n	Simple_repeat	1	93	(0)	2536146
15	14.8	2.6	2.5	chr3	36380394	36380432	(161915127)	+	(GGCGG)n	Simple_repeat	1	40	(0)	2549821
12	16.9	8.3	1.9	chr3	36380462	36380509	(161915050)	+	G-rich	Low_complexity	1	52	(0)	2549822
280	26.8	7.6	0.0	chr3	38039699	38039795	(160255764)	C	L2a	LINE/L2	(27)	3399	3295	2552430
193	27.6	11.1	1.0	chr3	45593479	45593586	(152701973)	+	MIR	SINE/MIR	40	158	(50)	2564110
12	16.3	2.8	2.7	chr3	48429210	48429245	(149866314)	+	(GAGCCCC)n	Simple_repeat	1	37	(0)	2569299
15	16.1	0.0	0.0	chr3	48504036	48504064	(149791495)	+	(AGC)n	Simple_repeat	1	29	(0)	2569460
13	8.5	0.0	3.7	chr3	48685810	48685836	(149609723)	+	(GGCAG)n	Simple_repeat	1	27	(0)	2569696
17	26.6	5.3	3.0	chr3	48685860	48685954	(149609605)	+	(CGCCG)n	Simple_repeat	1	100	(0)	2569697
17	8.3	7.9	0.0	chr3	49120805	49120842	(149174717)	+	(TCCGGT)n	Simple_repeat	1	41	(0)	2570688
11	28.5	4.9	3.5	chr3	49340061	49340142	(148955417)	+	(CGCGCCG)n	Simple_repeat	1	86	(0)	2571124
16	26.7	0.0	3.5	chr3	49470325	49470381	(148825178)	+	(GGC)n	Simple_repeat	1	57	(0)	2571453
253	24.6	6.3	6.0	chr3	49786952	49787107	(148508452)	C	MIRc	SINE/MIR	(116)	152	4	2571976
14	11.0	0.0	5.9	chr3	50337380	50337417	(147958142)	+	(GCGTGC)n	Simple_repeat	1	35	(0)	2572924
28	29.3	2.8	0.9	chr3	51391240	51391358	(146904201)	+	(CGC)n	Simple_repeat	1	121	(0)	2574235
291	21.1	14.8	4.6	chr3	51538360	51538468	(146757091)	C	MIRb	SINE/MIR	(45)	223	102	2574562
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
756	27.0	6.7	0.0	chr3	53135072	53135267	(145160292)	C	MIR	SINE/MIR	(38)	224	15	2577056
13	14.5	3.2	0.0	chr3	58008464	58008494	(140287065)	+	(CCCGCT)n	Simple_repeat	1	32	(0)	2585183
229	29.3	17.6	0.6	chr3	58434127	58434291	(139861268)	C	L3	LINE/CR1	(15)	4084	3886	2586005
341	28.4	8.2	2.2	chr3	58434316	58434452	(139861107)	C	MIR	SINE/MIR	(17)	245	100	2586006
747	26.8	0.0	3.2	chr3	58629936	58630124	(139665435)	+	MIRb	SINE/MIR	48	230	(38)	2586396
473	31.8	9.2	2.4	chr3	58630474	58631045	(139664514)	+	L2c	LINE/L2	2613	3313	(62)	2586397
14	29.8	2.4	4.6	chr3	61561456	61561540	(136734019)	+	(CGCC)n	Simple_repeat	1	87	(0)	2590827
15	6.9	0.0	8.3	chr3	61561751	61561786	(136733773)	+	(CTCCC)n	Simple_repeat	1	36	(0)	2590828
21400	12.7	4.5	1.6	chr3	63011525	63016275	(135279284)	C	L1PA8A	LINE/L1	(1450)	5011	19	2593290
19	12.1	0.0	4.9	chr3	69542707	69542747	(128752812)	+	G-rich	Low_complexity	1	41	(0)	2604353
12	6.8	0.0	12.5	chr3	71581627	71581666	(126713893)	+	(GCCGCT)n	Simple_repeat	1	40	(0)	2607447
16	11.7	8.0	3.7	chr3	71581667	71581675	(126713884)	+	(CGCT)n	Simple_repeat	2	54	(0)	2607448
434	27.8	3.4	3.4	chr3	72996453	72996601	(125298958)	C	MIRb	SINE/MIR	(74)	194	46	2610397
21	6.5	0.0	0.0	chr3	72996644	72996675	(125298884)	+	(CTGGGG)n	Simple_repeat	1	32	(0)	2610398
19	26.4	4.1	4.5	chr3	87792497	87792618	(110502941)	+	GA-rich	Low_complexity	1	121	(0)	2629960
13911	20.9	3.0	1.4	chr3	104100710	104104158	(94191401)	C	L1PREC2	LINE/L1	(3446)	4695	426	2646640
11	18.1	2.4	4.8	chr3	105366741	105366781	(92928778)	+	G-rich	Low_complexity	1	42	(0)	2648180
20	28.7	2.8	0.0	chr3	105366924	105366995	(92928564)	+	(CCG)n	Simple_repeat	1	74	(0)	2648181
1754	10.2	2.9	0.0	chr3	109332811	109333046	(88962513)	+	AluSx	SINE/Alu	1	243	(69)	2653690
2124	13.4	0.3	2.8	chr3	109333060	109333379	(88962180)	+	AluSz	SINE/Alu	1	312	(0)	2653691
13	18.9	2.8	0.0	chr3	119579862	119579897	(78715662)	+	(CCCCGCC)n	Simple_repeat	1	37	(0)	2667826
19	23.1	4.0	2.6	chr3	120285175	120285248	(78010311)	+	(GCGCCGG)n	Simple_repeat	1	77	(0)	2668922
252	25.4	8.4	3.4	chr3	120285582	120285728	(78009831)	+	L1ME4a	LINE/L1	5969	6123	(1)	2668923
897	29.8	10.6	0.5	chr3	120846057	120846461	(77449098)	C	LTR16A	LTR/ERVL	(0)	451	1	2669763
4112	17.6	6.8	1.4	chr3	120846490	120847617	(77447942)	C	L1MB8	LINE/L1	(6)	6172	5002	2669764
5386	8.3	0.1	1.2	chr3	122442830	122443535	(75852024)	+	L1PA6	LINE/L1	1	702	(5482)	2672006
432	25.3	13.8	3.0	chr3	123066692	123066858	(75228701)	+	MIRb	SINE/MIR	67	254	(14)	2673093
2414	20.1	1.5	0.6	chr3	123312379	123312850	(74982709)	C	L1MB4	LINE/L1	(1)	6179	5704	2673507
197	28.6	1.8	0.0	chr3	123312873	123312928	(74982631)	+	L3b	LINE/CR1	4842	4898	(334)	2673504
15	13.2	3.0	0.0	chr3	123328862	123328894	(74966665)	+	(GGTGAA)n	Simple_repeat	1	34	(0)	2673526
280	31.6	5.4	6.6	chr3	127457412	127457740	(70837819)	+	L1ME3G	LINE/L1	530	806	(118)	2680069
89	19.5	2.2	2.6	chr3	127547665	127547888	(70747671)	+	(CCCCT)n	Simple_repeat	1	229	(0)	2680227
322	27.5	5.7	6.9	chr3	127628620	127628779	(70666780)	C	MIR3	SINE/MIR	(45)	163	6	2680396
15	17.6	1.7	8.2	chr3	128153460	128153519	(70142040)	+	G-rich	Low_complexity	1	61	(0)	2681288
14	4.0	3.3	6.5	chr3	128153493	128153522	(70142037)	+	(GGC)n	Simple_repeat	1	31	(0)	2681289
18	19.4	0.0	0.0	chr3	128153711	128153751	(70141808)	+	(GCCCGA)n	Simple_repeat	1	41	(0)	2681290
467	24.6	5.8	1.9	chr3	128681421	128681623	(69613936)	+	L1ME4b	LINE/L1	506	673	(219)	2682212
245	27.7	2.6	7.4	chr3	129026923	129027043	(69268516)	C	MLT1L	LTR/ERVL-MaLR	(81)	529	415	2682901
16	14.2	4.7	7.5	chr3	130894016	130894079	(67401480)	+	(GGAGGC)n	Simple_repeat	1	67	(0)	2686147
24	10.6	0.0	8.3	chr3	130894131	130894190	(67401369)	+	(CCCT)n	Simple_repeat	1	60	(0)	2686148
23	26.9	1.2	2.5	chr3	132034898	132034977	(66260582)	+	GA-rich	Low_complexity	1	81	(0)	2687845
11	22.5	2.2	4.3	chr3	136195597	136195642	(62099917)	+	(GGCGGC)n	Simple_repeat	1	47	(0)	2693943
508	29.0	0.6	3.0	chr3	141070681	141070847	(57224712)	C	MIR	SINE/MIR	(56)	206	44	2701728
14	26.8	3.2	6.1	chr3	143971700	143971794	(54323765)	+	(CCGCTC)n	Simple_repeat	1	98	(0)	2706423
15	16.6	0.0	0.0	chr3	143971976	143972002	(54323557)	+	(GC)n	Simple_repeat	1	27	(0)	2706424
14	13.7	4.5	4.3	chr3	146251023	146251066	(52044493)	+	GA-rich	Low_complexity	1	46	(0)	2709348
18	16.6	1.6	7.8	chr3	156817017	156817079	(41478480)	+	(GCG)n	Simple_repeat	1	64	(0)	2724606
13	5.3	0.0	0.0	chr3	156826640	156826659	(41468900)	+	(CCT)n	Simple_repeat	1	20	(0)	2724616
15	26.4	0.0	0.0	chr3	158098206	158098250	(40197309)	+	G-rich	Low_complexity	1	45	(0)	2726357
240	33.6	5.2	0.9	chr3	161373275	161373385	(36922174)	C	MIRc	SINE/MIR	(53)	215	100	2731249
201	30.5	9.4	8.1	chr3	169812781	169813001	(28482558)	C	L2b	LINE/L2	(45)	3330	3107	2741848
19	7.4	0.0	0.0	chr3	169966949	169966977	(28328582)	+	(GGGTG)n	Simple_repeat	1	29	(0)	2742120
18	16.0	0.0	0.0	chr3	170908597	170908631	(27386928)	+	(GCG)n	Simple_repeat	1	35	(0)	2743786
2384	9.3	0.7	0.7	chr3	173253195	173253495	(25042064)	C	AluY	SINE/Alu	(10)	301	1	2747314
6564	17.7	0.9	3.5	chr3	173253496	173253857	(25041702)	C	MSTA-int	LTR/ERVL-MaLR	(833)	798	471	2747313
644	34.5	5.2	5.8	chr3	175939986	175941418	(22354141)	+	L1PA15-16	LINE/L1	14	1542	(5324)	2751049
2384	16.9	0.9	3.5	chr3	176293102	176293536	(22002023)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	9	2751486
14	17.0	0.0	2.9	chr3	187618993	187619027	(10676532)	+	(CCTC)n	Simple_repeat	1	35	(0)	2770422
12	15.3	5.3	2.5	chr3	187990013	187990050	(10305509)	+	(CTGCAT)n	Simple_repeat	1	40	(0)	2771083
237	35.0	2.0	0.0	chr3	188947259	188947358	(9348201)	+	MIR1_Amn	SINE/MIR	45	146	(84)	2772771
21	17.3	0.0	0.0	chr3	190120671	190120711	(8174848)	+	(GCA)n	Simple_repeat	1	41	(0)	2774610
14	12.0	8.3	0.0	chr3	194686776	194686811	(3608748)	+	(CCG)n	Simple_repeat	1	39	(0)	2781657
374	31.5	10.0	7.5	chr3	195806188	195806616	(2488943)	+	L2a	LINE/L2	2986	3426	(0)	2783658
12	13.5	0.0	7.9	chr3	197556173	197556210	(739349)	+	G-rich	Low_complexity	1	38	(0)	2787123
43	30.8	0.8	0.0	chr4	337403	337532	(189877023)	+	(TG)n	Simple_repeat	1	131	(0)	2788954
282	30.9	2.8	3.5	chr4	473488	473631	(189740924)	+	MER57E3	LTR/ERV1	296	438	(49)	2789143
12	4.3	8.3	0.0	chr4	578919	578942	(189635613)	+	(CTGCC)n	Simple_repeat	1	26	(0)	2789275
24	25.1	4.9	1.9	chr4	2792973	2793074	(187421481)	+	G-rich	Low_complexity	1	107	(0)	2792250
12	14.5	0.0	10.6	chr4	2812383	2812429	(187402126)	+	(TGGCCCC)n	Simple_repeat	1	47	(0)	2792265
379	27.4	14.6	3.8	chr4	3880982	3881157	(186333398)	+	MIRb	SINE/MIR	18	201	(29)	2793755
360	29.2	3.0	5.3	chr4	5955880	5956049	(184258506)	+	L1ME4b	LINE/L1	243	408	(484)	2797486
386	19.3	3.5	0.0	chr4	5956050	5956132	(184258423)	C	Tigger3c	DNA/TcMar-Tigger	(0)	602	517	2797487
411	25.0	10.1	0.0	chr4	5956234	5956385	(184258170)	+	L2b	LINE/L2	3025	3193	(182)	2797488
12	18.4	0.0	3.0	chr4	8080336	8080368	(182134187)	+	G-rich	Low_complexity	1	33	(0)	2801200
1999	20.2	5.4	0.5	chr4	16908285	16908706	(173305849)	+	MLT1C	LTR/ERVL-MaLR	22	465	(2)	2815191
15	20.3	0.0	8.3	chr4	17781784	17781843	(172432712)	+	(GGACAG)n	Simple_repeat	1	60	(0)	2816919
30	26.4	1.5	5.8	chr4	22516000	22516135	(167698420)	+	(CGC)n	Simple_repeat	1	138	(0)	2824079
5612	19.4	2.7	0.1	chr4	36419547	36420646	(153793909)	+	LTR28C	LTR/ERV1	1	1129	(0)	2844739
21	26.6	1.4	1.4	chr4	37453961	37454029	(152760526)	+	(CCG)n	Simple_repeat	1	70	(0)	2846127
14	11.7	8.1	0.0	chr4	37826624	37826660	(152387895)	+	(CTCCGC)n	Simple_repeat	1	40	(0)	2846764
230	30.5	1.2	2.4	chr4	39978428	39978511	(150236044)	+	MER5A	DNA/hAT-Charlie	2	84	(105)	2850914
12	19.5	2.9	0.0	chr4	40057268	40057302	(150157253)	+	(AGGCCG)n	Simple_repeat	1	36	(0)	2851170
11	22.8	0.0	7.5	chr4	40630514	40630566	(149583989)	+	G-rich	Low_complexity	1	53	(0)	2852465
25	11.8	0.0	0.0	chr4	41216414	41216450	(148998105)	+	(G)n	Simple_repeat	1	37	(0)	2853655
20	25.4	1.6	1.6	chr4	41216451	41216462	(148998093)	+	(GCG)n	Simple_repeat	32	64	(0)	2853654
2171	18.9	8.9	3.3	chr4	44056788	44057302	(146157253)	+	LTR35A	LTR/ERV1	1	547	(0)	2857763
15	14.7	0.0	0.0	chr4	48017002	48017031	(142197524)	+	(TCAT)n	Simple_repeat	1	30	(0)	2863148
12	22.4	0.0	2.6	chr4	52751641	52751678	(137462877)	+	G-rich	Low_complexity	1	38	(0)	2866702
10005	23.5	4.0	6.1	chr4	54986006	54987827	(135226728)	+	L1MA4A	LINE/L1	719	2471	(5095)	2870193
12	10.9	0.0	8.6	chr4	56821734	56821768	(133392787)	+	G-rich	Low_complexity	1	35	(0)	2873371
13	21.3	2.2	2.2	chr4	57109922	57109966	(133104589)	+	(CGCGGCT)n	Simple_repeat	1	46	(0)	2873982
3444	22.0	6.4	2.7	chr4	61517138	61518029	(128696526)	+	Charlie17b	DNA/hAT-Charlie	43	969	(235)	2879532
18	21.1	1.7	4.9	chr4	68349770	68349829	(121864726)	+	(CCG)n	Simple_repeat	1	61	(0)	2888211
16	14.5	5.3	0.0	chr4	73998498	73998535	(116216020)	+	(CAG)n	Simple_repeat	1	40	(0)	2895598
24	7.9	2.4	2.3	chr4	74933047	74933088	(115281467)	+	(GGC)n	Simple_repeat	1	43	(0)	2896885
12	13.9	0.0	0.0	chr4	80072759	80072782	(110141773)	+	(CCG)n	Simple_repeat	1	24	(0)	2904351
19	19.5	3.2	3.1	chr4	83334720	83334781	(106879774)	+	(CAGCAG)n	Simple_repeat	1	64	(0)	2909319
17	20.9	2.9	5.7	chr4	83334900	83334967	(106879588)	+	(CCTC)n	Simple_repeat	1	70	(0)	2909320
13	9.4	5.3	5.0	chr4	83485208	83485245	(106729310)	+	G-rich	Low_complexity	1	40	(0)	2909614
18	26.4	0.0	7.9	chr4	84966648	84966680	(105247875)	+	(TCC)n	Simple_repeat	1	43	(46)	2911910
14	0.0	0.0	0.0	chr4	86594582	86594599	(103619956)	+	(GAG)n	Simple_repeat	1	18	(0)	2914076
3376	7.2	0.0	0.7	chr4	92277198	92277648	(97936907)	C	LTR7	LTR/ERV1	(2)	448	1	2922065
373	34.4	6.6	3.4	chr4	92277777	92278011	(97936544)	+	LTR16E1	LTR/ERVL	293	535	(3)	2922066
20	3.7	0.0	0.0	chr4	92305517	92305544	(97909011)	+	(CGCCT)n	Simple_repeat	1	28	(0)	2922096
3275	22.4	6.4	6.3	chr4	92520063	92520954	(97693601)	C	HERVL-int	LTR/ERVL	(0)	5654	4762	2922382
15	14.5	3.9	5.7	chr4	95729618	95729668	(94484887)	+	A-rich	Low_complexity	1	53	(0)	2926777
3074	17.4	6.7	2.5	chr4	95729688	95730464	(94484091)	C	LTR1D	LTR/ERV1	(0)	804	1	2926778
332	28.3	5.3	7.0	chr4	98662754	98662966	(91551589)	+	Charlie30a	DNA/hAT-Charlie	211	419	(372)	2930464
748	25.1	9.0	2.4	chr4	98663115	98663489	(91551066)	+	MLT1L	LTR/ERVL-MaLR	163	610	(0)	2930465
205	28.6	2.5	0.0	chr4	103198061	103198137	(87016418)	C	MIR3	SINE/MIR	(16)	192	114	2936744
929	30.0	3.5	2.0	chr4	109008187	109008529	(81206026)	+	LTR16C	LTR/ERVL	145	568	(0)	2944360
15	12.2	0.0	0.0	chr4	109302706	109302732	(80911823)	+	(GTGA)n	Simple_repeat	1	27	(0)	2944734
13	25.1	6.6	0.0	chr4	109302732	109302792	(80911763)	+	(GCGCCCG)n	Simple_repeat	1	65	(0)	2944735
1841	10.3	9.7	0.0	chr4	112645996	112646266	(77568289)	C	AluSx3	SINE/Alu	(8)	303	4	2949529
4739	17.4	1.3	3.5	chr4	114399064	114399933	(75814622)	C	LTR1D	LTR/ERV1	(143)	832	1	2952013
6661	18.8	5.8	1.5	chr4	120003749	120005302	(70209253)	+	L1M3f	LINE/L1	1239	2861	(4704)	2959247
404	15.6	4.2	3.2	chr4	123304532	123304624	(66909931)	C	UCON68	Unknown	(34)	98	5	2963758
1879	22.6	9.2	1.6	chr4	124738619	124739122	(65475433)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	3	2965687
772	25.4	12.8	5.3	chr4	124739123	124739368	(65475187)	C	LTR79	LTR/ERVL	(209)	318	58	2965686
18	9.6	0.0	5.4	chr4	128812298	128812334	(61402221)	+	GA-rich	Low_complexity	1	37	(0)	2971409
12	21.0	2.4	2.4	chr4	140049208	140049248	(50165307)	+	(TCCCTCT)n	Simple_repeat	1	42	(0)	2985643
12	13.7	6.2	0.0	chr4	140154048	140154079	(50060476)	+	(CGCTGC)n	Simple_repeat	1	34	(0)	2985803
16	0.0	0.0	0.0	chr4	140154108	140154127	(50060428)	+	(CGC)n	Simple_repeat	1	20	(0)	2985804
34	2.4	2.3	2.2	chr4	140154128	140154171	(50060384)	+	(CCT)n	Simple_repeat	1	45	(0)	2985805
18	15.0	2.1	4.1	chr4	140154307	140154354	(50060201)	+	(CGCCCGG)n	Simple_repeat	1	49	(0)	2985806
13	15.5	11.9	1.5	chr4	140427653	140427711	(49786844)	+	(GCGCGT)n	Simple_repeat	1	66	(0)	2986212
36	7.2	0.0	0.0	chr4	141133452	141133495	(49081060)	+	(GT)n	Simple_repeat	1	44	(0)	2987301
13	21.9	0.0	2.6	chr4	153344509	153344553	(36870002)	+	(CCCCAG)n	Simple_repeat	1	43	(0)	3004473
11	27.0	3.6	1.8	chr4	153344683	153344737	(36869818)	+	(CCCGCG)n	Simple_repeat	1	57	(0)	3004474
1777	18.8	3.7	0.0	chr4	154333573	154333907	(35880648)	+	Tigger3a	DNA/TcMar-Tigger	1	348	(0)	3005874
26	22.4	1.3	2.6	chr4	154491788	154491863	(35722692)	+	G-rich	Low_complexity	1	77	(0)	3006119
13	25.2	0.0	2.3	chr4	154491937	154491980	(35722575)	+	(CGCCTC)n	Simple_repeat	1	44	(0)	3006120
440	26.4	17.9	1.0	chr4	158723613	158723807	(31490748)	+	MIRb	SINE/MIR	34	268	(0)	3011786
6143	24.8	4.1	3.5	chr4	171717996	171720347	(18494208)	+	L1PA15	LINE/L1	1659	4032	(4128)	3029354
15	20.5	3.5	8.0	chr4	173168705	173168789	(17045766)	+	G-rich	Low_complexity	1	88	(0)	3031238
12	7.5	6.7	3.1	chr4	173169705	173169734	(17044821)	+	(CCCG)n	Simple_repeat	1	32	(0)	3031240
13	21.7	0.0	2.6	chr4	173169735	173169742	(17044813)	+	(CCCCAGC)n	Simple_repeat	2	39	(0)	3031241
998	26.6	11.3	4.3	chr4	181949410	181949981	(8264574)	+	L2a	LINE/L2	2545	3189	(237)	3042758
3054	8.3	2.9	0.7	chr4	181949982	181950417	(8264138)	+	LTR7	LTR/ERV1	3	448	(2)	3042759
1305	13.4	1.0	0.5	chr4	185305092	185305294	(4909261)	+	MER20	DNA/hAT-Charlie	16	219	(0)	3048069
279	24.0	5.1	3.9	chr5	345887	345964	(181192295)	C	LTR40c	LTR/ERVL	(274)	191	113	3055352
27	14.6	7.4	2.3	chr5	1246817	1246897	(180291362)	+	(TCCCTCC)n	Simple_repeat	1	87	(0)	3056077
13	21.2	2.6	0.0	chr5	1295520	1295557	(180242702)	+	G-rich	Low_complexity	1	39	(0)	3056108
109	19.5	0.7	5.0	chr5	2038871	2039165	(179499094)	+	G-rich	Low_complexity	1	297	(0)	3056891
20948	14.3	4.6	1.6	chr5	10027707	10031671	(171506588)	C	L1MA1	LINE/L1	(3465)	4100	13	3066222
2108	28.4	5.9	4.9	chr5	10110854	10111772	(171426487)	C	L1MC4	LINE/L1	(1)	8041	7113	3066336
288	37.5	1.4	0.0	chr5	10111866	10112001	(171426258)	+	HERVL-int	LTR/ERVL	2890	3027	(2627)	3066337
7596	13.4	16.0	0.1	chr5	12661735	12663059	(168875200)	+	LTR12C	LTR/ERV1	3	1577	(2)	3069841
23	20.4	4.3	1.4	chr5	16179074	16179142	(165359117)	+	(GCT)n	Simple_repeat	1	72	(0)	3074628
5175	11.6	2.7	1.0	chr5	17443213	17443982	(164094277)	+	LTR1	LTR/ERV1	1	783	(0)	3076858
1337	21.5	4.3	0.7	chr5	35617351	35617638	(145920621)	C	AluSx3	SINE/Alu	(11)	300	2	3101644
15	15.9	2.9	0.0	chr5	35618094	35618128	(145920131)	+	(AGCGC)n	Simple_repeat	1	36	(0)	3101645
13	26.3	0.0	5.5	chr5	54518246	54518300	(127019959)	+	(GCC)n	Simple_repeat	1	55	(0)	3121857
382	28.3	5.5	1.7	chr5	69189834	69190009	(112348250)	+	MIRb	SINE/MIR	45	227	(41)	3143460
1710	10.3	4.8	8.0	chr5	69333085	69333214	(112205045)	+	AluJr	SINE/Alu	6	137	(175)	3143799
25	10.1	2.3	0.0	chr5	74640843	74640885	(106897374)	+	(AGG)n	Simple_repeat	1	44	(0)	3152271
17	14.2	0.0	0.0	chr5	77030780	77030810	(104507449)	+	(CGC)n	Simple_repeat	1	31	(0)	3156071
11	12.8	8.7	4.0	chr5	79991100	79991145	(101547114)	+	(CCTGCGC)n	Simple_repeat	1	50	(0)	3160666
1545	18.0	11.3	0.7	chr5	80747656	80747962	(100790297)	+	Tigger3a	DNA/TcMar-Tigger	2	345	(3)	3162139
226	23.3	0.0	0.0	chr5	80748005	80748047	(100790212)	C	CR1-13_AMi	LINE/CR1	(30)	694	652	3162140
227	33.3	0.8	2.4	chr5	80748150	80748272	(100789987)	C	X7B_LINE	LINE/CR1	(35)	215	95	3162141
247	27.8	6.6	6.2	chr5	82274935	82275133	(99263126)	C	L2b	LINE/L2	(366)	3053	2853	3164380
20	32.6	3.2	1.0	chr5	83473435	83473527	(98064732)	+	(TC)n	Simple_repeat	1	96	(0)	3166014
12	4.7	4.5	0.0	chr5	83473608	83473629	(98064630)	+	(AGGG)n	Simple_repeat	1	23	(0)	3166015
3225	16.2	13.3	0.3	chr5	85069535	85070201	(96468058)	+	LTR27C	LTR/ERV1	1	767	(0)	3168083
11	27.4	1.6	4.8	chr5	90474401	90474462	(91063797)	+	GA-rich	Low_complexity	1	63	(0)	3174832
25	13.9	0.0	3.8	chr5	100903436	100903488	(80634771)	+	(ACAT)n	Simple_repeat	1	53	(0)	3188317
12	22.9	1.7	6.8	chr5	107670654	107670711	(73867548)	+	G-rich	Low_complexity	1	59	(0)	3196630
15	16.9	0.0	0.0	chr5	108381811	108381837	(73156422)	+	(CA)n	Simple_repeat	1	27	(0)	3197553
12	9.8	0.0	0.0	chr5	108381945	108381966	(73156293)	+	(GCGA)n	Simple_repeat	1	22	(0)	3197554
283	31.4	10.2	4.6	chr5	108727825	108728018	(72810241)	C	MIRb	SINE/MIR	(58)	210	5	3198049
640	15.9	9.8	0.0	chr5	111091902	111092058	(70446201)	C	L1MC5	LINE/L1	(191)	9113	8940	3200971
14	20.0	2.4	2.3	chr5	112922243	112922284	(68615975)	+	(GCG)n	Simple_repeat	1	43	(0)	3203525
36	21.7	0.0	1.2	chr5	113488327	113488409	(68049850)	+	(CGC)n	Simple_repeat	1	83	(0)	3204364
12	20.8	0.0	2.9	chr5	115169937	115169971	(66368288)	+	G-rich	Low_complexity	1	35	(0)	3206387
13	20.3	7.8	0.0	chr5	115170211	115170261	(66367998)	+	G-rich	Low_complexity	1	55	(0)	3206388
11642	15.5	2.4	0.3	chr5	117012604	117014009	(64524250)	C	L1PA13	LINE/L1	(4514)	2271	827	3209011
23	32.2	1.0	1.9	chr5	119268626	119268728	(62269531)	+	(CCCGC)n	Simple_repeat	1	104	(0)	3212077
1080	27.8	4.9	2.4	chr5	119469655	119470132	(62068127)	C	L1MA5	LINE/L1	(5144)	2065	1586	3212352
1499	31.7	5.8	4.1	chr5	119470165	119470793	(62067466)	C	L1MA5	LINE/L1	(6569)	640	1	3212352
14	24.7	0.0	2.2	chr5	120464396	120464440	(61073819)	+	(GCGGCA)n	Simple_repeat	1	45	(0)	3213552
14	8.1	9.8	2.2	chr5	126777769	126777809	(54760450)	+	(CGACGCG)n	Simple_repeat	1	45	(0)	3221960
28260	2.6	0.1	0.4	chr5	126890287	126896333	(54641926)	C	L1PA3	LINE/L1	(0)	6155	126	3222146
31	0.0	0.0	0.0	chr5	132228034	132228062	(49310197)	+	(GGAGCC)n	Simple_repeat	1	29	(0)	3229059
535	21.8	12.1	10.1	chr5	132556531	132556749	(48981510)	C	Charlie1	DNA/hAT-Charlie	(2555)	226	3	3229557
15	18.1	2.6	0.0	chr5	133052191	133052250	(48486009)	+	(GCCGGA)n	Simple_repeat	1	61	(0)	3230468
12	17.2	4.9	2.3	chr5	134226811	134226851	(47311408)	+	(GCCTCGC)n	Simple_repeat	1	43	(0)	3232122
14	18.8	6.0	1.9	chr5	134845910	134845959	(46692300)	+	(CGCGTG)n	Simple_repeat	1	53	(0)	3233498
14	12.0	0.0	3.5	chr5	138464200	138464228	(43074031)	+	GA-rich	Low_complexity	1	29	(0)	3238914
283	32.7	12.0	1.0	chr5	139439598	139439804	(42098455)	+	MIRc	SINE/MIR	2	234	(34)	3240769
325	15.1	14.9	0.8	chr5	139755843	139755969	(41782290)	C	MER96B	DNA/hAT-Tip100	(32)	385	238	3241461
545	31.4	6.4	0.0	chr5	140691855	140692045	(40846214)	C	MIRb	SINE/MIR	(16)	252	49	3243078
389	29.4	10.7	9.9	chr5	141002518	141002740	(40535519)	+	MIR	SINE/MIR	33	257	(5)	3243486
21	17.6	1.9	1.9	chr5	141636810	141636862	(39901397)	+	(CCCGCCG)n	Simple_repeat	1	54	(0)	3244320
16	25.9	0.0	8.7	chr5	141945832	141945923	(39592336)	+	G-rich	Low_complexity	1	92	(0)	3244929
13	4.0	3.3	6.5	chr5	142314347	142314376	(39223883)	+	(GGCA)n	Simple_repeat	1	31	(0)	3245710
37	6.6	0.0	0.0	chr5	147235008	147235055	(34303204)	+	(CCCAG)n	Simple_repeat	1	48	(0)	3253916
14	18.2	0.0	0.0	chr5	147510016	147510046	(34028213)	+	(AGCC)n	Simple_repeat	1	31	(0)	3254369
15	18.2	4.3	2.1	chr5	147510195	147510240	(34028019)	+	(GCGCAC)n	Simple_repeat	1	48	(0)	3254370
14	12.7	0.0	0.0	chr5	150656530	150656555	(30881704)	+	(CCG)n	Simple_repeat	1	26	(0)	3260455
37	2.6	0.0	0.0	chr5	150656738	150656776	(30881483)	+	(CGCCCC)n	Simple_repeat	1	39	(0)	3260456
18	17.9	0.0	0.0	chr5	151447684	151447722	(30090537)	+	(AGCCGG)n	Simple_repeat	1	39	(0)	3261885
18	0.0	0.0	0.0	chr5	151924884	151924903	(29613356)	+	(T)n	Simple_repeat	1	20	(0)	3262871
19	27.9	4.0	1.3	chr5	159209582	159209656	(22328603)	+	(GC)n	Simple_repeat	1	78	(0)	3275707
15	24.9	5.9	1.4	chr5	160287744	160287811	(21250448)	+	(AGGC)n	Simple_repeat	1	72	(0)	3277852
12	20.9	0.0	4.8	chr5	160312606	160312647	(21225612)	+	(CCGCGCC)n	Simple_repeat	1	42	(0)	3277908
22	27.1	0.0	0.0	chr5	160312917	160312970	(21225289)	+	(TT)n	Simple_repeat	1	54	(0)	3277909
14	0.0	0.0	0.0	chr5	160370447	160370464	(21167795)	+	(TCC)n	Simple_repeat	1	18	(0)	3278046
11	9.9	5.6	5.3	chr5	163437836	163437871	(18100388)	+	(GGTGCG)n	Simple_repeat	1	38	(0)	3282556
11131	12.8	0.4	1.0	chr5	164104546	164106186	(17432073)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	3283558
387	28.0	8.7	4.9	chr5	168117861	168118104	(13420155)	+	MIR	SINE/MIR	2	255	(7)	3289405
446	18.3	3.5	0.0	chr5	170744798	170744879	(10793380)	+	MER45A	DNA/hAT-Tip100	60	144	(34)	3294228
18	7.5	0.0	0.0	chr5	172479217	172479244	(9059015)	+	(CAGA)n	Simple_repeat	1	28	(0)	3297527
16	15.8	4.5	2.2	chr5	172683572	172683615	(8854644)	+	(GCC)n	Simple_repeat	1	46	(0)	3297973
2611	14.3	4.0	8.9	chr5	175548806	175549358	(5988901)	C	LTR45	LTR/ERV1	(0)	525	1	3303613
1991	12.0	0.0	6.3	chr5	175549403	175549719	(5988540)	+	AluSz	SINE/Alu	2	298	(14)	3303614
260	29.4	2.7	6.5	chr5	175873378	175873530	(5664729)	C	L2b	LINE/L2	(4)	3371	3225	3304319
16	12.8	2.8	2.7	chr5	175873674	175873709	(5664550)	+	(ATG)n	Simple_repeat	1	37	(0)	3304320
510	23.2	1.1	0.2	chr5	176591513	176592659	(4945600)	+	(GGT)n	Simple_repeat	1	1160	(0)	3305621
341	22.9	7.6	3.9	chr5	176837948	176838074	(4700185)	C	L2a	LINE/L2	(0)	3426	3295	3306091
73	1.2	3.6	1.1	chr5	177371042	177371125	(4167134)	+	(GGGCCG)n	Simple_repeat	1	87	(0)	3307276
255	39.1	0.0	1.8	chr5	177402766	177402877	(4135382)	C	MIR	SINE/MIR	(43)	219	110	3307345
44	24.5	0.8	2.3	chr5	177455323	177455452	(4082807)	+	(GCGCAC)n	Simple_repeat	1	131	(0)	3307451
19	12.4	0.0	0.0	chr5	177455614	177455648	(4082611)	+	(CGGGCT)n	Simple_repeat	1	35	(0)	3307452
253	30.5	3.5	0.0	chr5	178556059	178556140	(2982119)	+	L1ME4b	LINE/L1	451	535	(357)	3309394
6575	20.7	3.8	5.8	chr5	178831716	178833566	(2704693)	C	REP522	Satellite/telo	(182)	1813	1	3309889
5052	15.4	2.7	0.4	chr5	179059219	179060061	(2478198)	+	L1MA4A	LINE/L1	5436	6298	(5)	3310303
15	20.0	0.0	5.9	chr5	180292171	180292221	(1246038)	+	G-rich	Low_complexity	1	51	(0)	3312366
4377	16.9	14.6	3.1	chr5	181069831	181070864	(467395)	C	MER52C	LTR/ERV1	(105)	1173	1	3313602
1519	21.2	2.2	4.6	chr6	1524332	1524697	(169281282)	C	MLT1A0	LTR/ERVL-MaLR	(8)	357	1	3316257
11	26.8	3.6	1.8	chr6	3751244	3751298	(167054681)	+	(CCCGCG)n	Simple_repeat	1	57	(0)	3319353
13	13.2	0.0	0.0	chr6	3751561	3751585	(167054394)	+	(CCCG)n	Simple_repeat	1	25	(0)	3319354
190	24.4	2.2	0.0	chr6	3895128	3895172	(166910807)	C	L2b	LINE/L2	(20)	3355	3310	3319611
12	5.6	0.0	0.0	chr6	5085782	5085800	(165720179)	+	(GCA)n	Simple_repeat	1	19	(0)	3321506
12	9.3	5.0	7.1	chr6	7541708	7541747	(163264232)	+	(CTCCCG)n	Simple_repeat	1	42	(0)	3325357
31	3.3	0.0	0.0	chr6	14284334	14284364	(156521615)	+	(TG)n	Simple_repeat	1	31	(0)	3335746
5881	12.9	11.6	14.7	chr6	17200446	17201745	(153604234)	+	LTR12D	LTR/ERV1	1	1254	(0)	3340712
18	12.8	0.0	0.0	chr6	18122654	18122687	(152683292)	+	(ACGGTC)n	Simple_repeat	1	34	(0)	3342482
248	28.3	5.0	0.0	chr6	18122833	18122963	(152683016)	C	MIRc	SINE/MIR	(78)	190	45	3342483
4214	21.8	8.0	1.8	chr6	19210628	19210812	(151595167)	C	L1PA13	LINE/L1	(5552)	1233	1010	3344123
13	28.4	3.0	2.9	chr6	21665926	21665992	(149139987)	+	GA-rich	Low_complexity	1	69	(0)	3348061
56	0.0	0.0	0.0	chr6	24645841	24645888	(146160091)	+	(AC)n	Simple_repeat	1	48	(0)	3352298
855	30.7	2.4	0.4	chr6	24981651	24981892	(145824087)	+	MIR	SINE/MIR	12	258	(4)	3352878
15	20.5	0.0	2.4	chr6	25652156	25652196	(145153783)	+	G-rich	Low_complexity	1	41	(0)	3353909
230	2.6	20.8	0.0	chr6	27873483	27873520	(142932459)	+	LTR10B1	LTR/ERV1	210	257	(290)	3357740
270	24.2	0.0	0.0	chr6	34146221	34146282	(136659697)	C	MIR3	SINE/MIR	(66)	142	81	3367714
13	11.2	4.5	6.5	chr6	35486673	35486716	(135319263)	+	(GCTCTGG)n	Simple_repeat	1	46	(0)	3370474
9984	7.3	9.6	0.4	chr6	35931086	35932485	(134873494)	+	LTR12C	LTR/ERV1	3	1538	(41)	3371472
14	25.3	2.0	2.0	chr6	37649091	37649139	(133156840)	+	(CGG)n	Simple_repeat	1	50	(0)	3375062
17	11.7	2.6	2.5	chr6	44297771	44297810	(126508169)	+	(CGCTGC)n	Simple_repeat	1	40	(0)	3386924
12	23.5	2.5	0.0	chr6	53544953	53544992	(117260987)	+	(GCGGCG)n	Simple_repeat	1	41	(0)	3400326
15	20.2	0.0	0.0	chr6	69232974	69233007	(101572972)	+	(GCT)n	Simple_repeat	1	34	(0)	3417699
12	20.2	2.9	0.0	chr6	70668264	70668297	(100137682)	+	(GGCG)n	Simple_repeat	1	35	(0)	3419586
17	18.6	0.0	0.0	chr6	70956192	70956228	(99849751)	+	(GCGGCT)n	Simple_repeat	1	37	(0)	3419938
39	4.7	0.0	0.0	chr6	73263040	73263084	(97542895)	+	(GGC)n	Simple_repeat	1	45	(0)	3423001
16	19.9	0.0	2.4	chr6	79234607	79234648	(91571331)	+	(GCTGCC)n	Simple_repeat	1	42	(0)	3430987
311	28.2	9.2	10.6	chr6	79631261	79631458	(91174521)	+	L1M4b	LINE/L1	293	487	(6380)	3431532
16	0.0	4.3	0.0	chr6	79947629	79947651	(90858328)	+	(CCCT)n	Simple_repeat	1	24	(0)	3431999
31	23.0	0.9	4.7	chr6	83067992	83068096	(87737883)	+	G-rich	Low_complexity	1	106	(0)	3436015
17	24.5	2.0	0.0	chr6	85642957	85642998	(85162981)	+	(CG)n	Simple_repeat	1	43	(0)	3439341
26	3.1	3.0	0.0	chr6	85642999	85643031	(85162948)	+	(CCCTT)n	Simple_repeat	1	34	(0)	3439342
15	23.8	2.8	5.5	chr6	85643038	85643108	(85162871)	+	(TCC)n	Simple_repeat	1	73	(0)	3439343
23	27.2	2.9	2.9	chr6	85643224	85643325	(85162654)	+	(CTCG)n	Simple_repeat	1	105	(0)	3439344
13	10.4	2.9	5.6	chr6	85643759	85643793	(85162186)	+	(CGCGCC)n	Simple_repeat	1	36	(0)	3439347
15	0.0	6.2	5.9	chr6	85679150	85679181	(85126798)	+	(GCTG)n	Simple_repeat	1	34	(0)	3439430
351	32.9	6.1	0.7	chr6	89311754	89311936	(81494043)	C	MIRb	SINE/MIR	(70)	198	4	3444547
25681	6.6	0.6	0.1	chr6	100908126	100914267	(69891712)	C	L1PA4	LINE/L1	(1)	6327	178	3459638
252	20.4	10.2	2.2	chr6	100914290	100914379	(69891600)	C	L1M6	LINE/L1	(4623)	1873	1776	3459639
11	10.6	0.0	10.5	chr6	104941037	104941074	(65864905)	+	G-rich	Low_complexity	1	38	(0)	3464694
25	22.3	0.0	4.1	chr6	108260931	108261003	(62544976)	+	(GCC)n	Simple_repeat	1	73	(0)	3470262
1463	28.0	18.6	1.8	chr6	111253406	111254510	(59551469)	+	L2a	LINE/L2	2079	3424	(2)	3475302
18621	5.1	1.0	0.3	chr6	111505513	111507862	(59298117)	C	L1P2	LINE/L1	(3794)	2352	1	3475722
15	17.7	2.6	0.0	chr6	112253756	112253793	(58552186)	+	(TCAACTT)n	Simple_repeat	1	39	(0)	3476841
37	21.7	0.0	0.0	chr6	112254337	112254409	(58551570)	+	(CT)n	Simple_repeat	1	73	(0)	3476842
16	0.0	0.0	4.2	chr6	113971649	113971672	(56834307)	+	(TTA)n	Simple_repeat	1	24	(0)	3479423
18	24.6	0.0	0.0	chr6	116100826	116100873	(54705106)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3482130
15	12.8	2.8	2.7	chr6	116279371	116279406	(54526573)	+	(CCTCAG)n	Simple_repeat	1	37	(0)	3482345
216	31.4	0.0	8.2	chr6	116680803	116680875	(54125104)	+	L2a	LINE/L2	3322	3388	(38)	3482933
14	22.6	2.4	0.0	chr6	116680890	116680930	(54125049)	+	(GAAT)n	Simple_repeat	1	42	(0)	3482934
37	0.0	0.0	0.0	chr6	116681112	116681145	(54124834)	+	(CCG)n	Simple_repeat	1	34	(0)	3482935
17	15.7	5.5	6.5	chr6	122610433	122610505	(48195474)	+	(GAGCGC)n	Simple_repeat	1	77	(0)	3490622
13	12.0	5.0	4.8	chr6	125749637	125749676	(45056303)	+	(AGCCGC)n	Simple_repeat	1	42	(0)	3494761
16	11.3	4.8	4.5	chr6	128883311	128883352	(41922627)	+	(GCA)n	Simple_repeat	1	44	(0)	3498755
361	27.7	6.7	1.8	chr6	131293384	131293497	(39512482)	+	LTR78	LTR/ERV1	273	392	(912)	3502129
3129	8.3	6.7	4.0	chr6	131293760	131293970	(39512009)	+	MER4C	LTR/ERV1	1	212	(253)	3502130
3981	25.9	3.2	2.7	chr6	131517483	131520946	(39285033)	C	L1PA15-16	LINE/L1	(3217)	3695	344	3502467
589	18.1	0.2	0.8	chr6	131628642	131628778	(39177201)	C	L1M5	LINE/L1	(2294)	3852	3715	3502624
4889	20.0	6.1	0.9	chr6	131918253	131919316	(38886663)	+	L1PA13	LINE/L1	17	1139	(5646)	3503105
13	20.9	1.0	5.2	chr6	136822627	136822692	(33983287)	+	G-rich	Low_complexity	1	63	(0)	3510537
14	20.6	0.0	6.0	chr6	136822798	136822847	(33983132)	+	(GAGGCG)n	Simple_repeat	1	50	(0)	3510538
12	27.1	0.0	0.0	chr6	137044331	137044370	(33761609)	+	(GCACCGC)n	Simple_repeat	1	40	(0)	3510893
19	19.3	0.0	0.0	chr6	137044663	137044704	(33761275)	+	(CAGCAG)n	Simple_repeat	1	42	(0)	3510894
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
322	30.3	7.1	11.9	chr6	139027596	139028041	(31777938)	C	MLT1M	LTR/ERVL-MaLR	(129)	543	121	3513980
13	18.2	2.6	2.5	chr6	144285043	144285081	(26520898)	+	G-rich	Low_complexity	1	40	(0)	3521175
3855	17.0	8.2	14.2	chr6	148764494	148765847	(22040132)	C	MER11A	LTR/ERVK	(0)	1266	1	3527407
15	3.5	3.0	5.9	chr6	151390283	151390315	(19415664)	+	(CCGGGG)n	Simple_repeat	1	34	(0)	3531906
13	18.2	3.5	6.8	chr6	154733522	154733578	(16072401)	+	G-rich	Low_complexity	1	59	(0)	3536959
16	9.9	0.0	5.6	chr6	157236000	157236035	(13569944)	+	GA-rich	Low_complexity	1	36	(0)	3540581
1114	22.6	14.1	4.2	chr6	157533148	157533677	(13272302)	C	L2a	LINE/L2	(1)	3425	2858	3541067
268	28.8	6.6	0.6	chr6	166998202	166998372	(3807607)	+	MER4C	LTR/ERV1	283	464	(1)	3553892
654	28.3	8.1	0.0	chr6	168051381	168051631	(2754348)	+	MLT1A0	LTR/ERVL-MaLR	24	296	(69)	3555091
14	17.6	0.0	0.0	chr7	726723	726754	(158619219)	+	(GGTGGC)n	Simple_repeat	1	32	(0)	3558809
17	13.3	0.0	11.3	chr7	975609	975670	(158370303)	+	(GCCCC)n	Simple_repeat	1	62	(0)	3559144
253	22.9	1.6	1.4	chr7	975744	975834	(158370139)	C	MIRc	SINE/MIR	(65)	165	77	3559145
218	37.5	4.4	4.4	chr7	1403232	1403390	(157942583)	C	L2c	LINE/L2	(206)	3181	3023	3559851
255	21.2	4.5	5.6	chr7	1403635	1403724	(157942249)	+	MIR3	SINE/MIR	49	137	(71)	3559852
234	34.1	14.4	0.6	chr7	1576307	1576480	(157769493)	+	L3	LINE/CR1	3897	4098	(1)	3560110
1807	16.2	0.0	0.0	chr7	1576574	1576839	(157769134)	+	AluJr	SINE/Alu	1	266	(46)	3560111
12	5.5	0.0	0.0	chr7	2874031	2874049	(156471924)	+	(ACA)n	Simple_repeat	1	19	(0)	3562187
238	33.5	6.4	1.0	chr7	2874516	2874545	(156471428)	C	MIRc	SINE/MIR	(43)	225	195	3562188
1826	13.9	1.6	0.3	chr7	2874546	2874848	(156471125)	C	AluJr	SINE/Alu	(2)	310	4	3562189
2307	6.3	1.7	0.3	chr7	5563836	5564122	(153781851)	C	AluSp	SINE/Alu	(21)	292	2	3567346
29	20.3	0.9	7.5	chr7	6503692	6503797	(152842176)	+	G-rich	Low_complexity	1	107	(0)	3569531
13	26.3	1.6	4.6	chr7	7968727	7968790	(151377183)	+	G-rich	Low_complexity	1	65	(0)	3571872
19	12.1	2.8	0.0	chr7	7968827	7968862	(151377111)	+	(GCG)n	Simple_repeat	1	37	(0)	3571873
309	30.2	10.4	6.4	chr7	7969024	7969225	(151376748)	C	L1M4b	LINE/L1	(6249)	618	408	3571874
47921	15.3	1.3	1.8	chr7	12067139	12074892	(147271081)	+	HERVIP10F-int	LTR/ERV1	2	7718	(19)	3576964
14	15.4	5.6	0.0	chr7	12686828	12686863	(146659110)	+	(GGCG)n	Simple_repeat	1	38	(0)	3577694
915	32.5	5.4	2.0	chr7	21261615	21262004	(138083969)	C	MLT1I	LTR/ERVL-MaLR	(1)	410	7	3588946
198	26.4	5.3	4.0	chr7	22082689	22082763	(137263210)	+	MER5A	DNA/hAT-Charlie	58	133	(56)	3590176
13	24.9	4.6	2.9	chr7	23474085	23474149	(135871824)	+	(GCCGC)n	Simple_repeat	1	68	(0)	3592403
329	33.8	9.1	2.6	chr7	24981023	24981362	(134364611)	C	L2a	LINE/L2	(19)	3407	3044	3594693
13	20.5	2.6	0.0	chr7	30938796	30938834	(128407139)	+	(CCCCAAG)n	Simple_repeat	1	40	(0)	3603905
17	33.0	0.0	3.6	chr7	35801781	35801864	(123544109)	+	(GGC)n	Simple_repeat	1	84	(0)	3611240
15	0.0	0.0	0.0	chr7	39949858	39949876	(119396097)	+	(GGC)n	Simple_repeat	1	19	(0)	3617484
13	27.2	3.4	5.5	chr7	39949956	39950043	(119395930)	+	(CCCAG)n	Simple_repeat	1	91	(0)	3617485
12	29.2	0.0	3.7	chr7	42911707	42911760	(116434213)	+	(CGGCC)n	Simple_repeat	1	54	(0)	3621832
12	10.1	8.3	5.8	chr7	42911917	42911964	(116434009)	+	(GCACGCGA)n	Simple_repeat	1	52	(0)	3621833
11842	11.7	1.2	1.6	chr7	46015232	46018455	(113327518)	+	L1PA8A	LINE/L1	120	3343	(3118)	3626708
603	30.9	6.3	3.9	chr7	47992099	47992580	(111353393)	+	HAL1	LINE/L1	707	1200	(1307)	3629335
1074	21.0	5.4	2.1	chr7	51446275	51446508	(107899465)	+	MER61-int	LTR/ERV1	2	243	(4974)	3633708
1546	18.8	27.4	1.5	chr7	51446558	51447009	(107898964)	+	MER61-int	LTR/ERV1	213	783	(4434)	3633708
359	24.2	14.3	0.6	chr7	66413115	66413315	(92932658)	C	FLAM_C	SINE/Alu	(2)	300	45	3649935
22	11.8	0.0	0.0	chr7	73770144	73770180	(85575793)	+	(GACG)n	Simple_repeat	1	37	(0)	3665431
14	25.5	8.1	0.0	chr7	73770213	73770286	(85575687)	+	(GCTGCG)n	Simple_repeat	1	80	(0)	3665432
13	27.0	1.6	3.2	chr7	76201662	76201722	(83144251)	+	G-rich	Low_complexity	1	62	(0)	3671569
2141	13.5	0.0	0.3	chr7	76217281	76217583	(83128390)	C	AluSq2	SINE/Alu	(9)	304	3	3671614
3129	11.3	1.9	4.7	chr7	76217584	76217977	(83127996)	C	LTR46	LTR/ERV1	(65)	395	1	3671613
13	7.1	0.0	10.8	chr7	76235025	76235061	(83110912)	+	G-rich	Low_complexity	1	37	(0)	3671661
13	28.4	0.9	8.5	chr7	76235311	76235415	(83110558)	+	G-rich	Low_complexity	1	106	(0)	3671662
23964	7.1	0.5	0.9	chr7	87464900	87468654	(71877319)	+	L1PA5	LINE/L1	11	3758	(2388)	3687234
21	17.1	0.0	2.1	chr7	94656243	94656248	(64689725)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	3696937
19	5.6	5.1	2.4	chr7	94656249	94656287	(64689686)	+	(CCCCCAT)n	Simple_repeat	1	41	(0)	3696938
12	22.4	0.0	2.6	chr7	98617086	98617123	(60728850)	+	(CTCACG)n	Simple_repeat	1	38	(0)	3702996
15	22.8	7.5	2.3	chr7	100966449	100966481	(58379492)	+	(GGCGCT)n	Simple_repeat	1	52	(34)	3707725
16	11.6	0.0	0.0	chr7	100966482	100966509	(58379464)	+	(GCT)n	Simple_repeat	1	28	(0)	3707726
15	22.8	7.5	2.3	chr7	100966510	100966528	(58379445)	+	(GGCGCT)n	Simple_repeat	53	86	(0)	3707725
12	20.2	0.0	6.7	chr7	101154370	101154414	(58191559)	+	G-rich	Low_complexity	1	45	(0)	3708121
16	17.9	5.8	1.8	chr7	101165508	101165559	(58180414)	+	(GGCTC)n	Simple_repeat	1	55	(0)	3708140
27	0.0	0.0	0.0	chr7	101165787	101165812	(58180161)	+	(AATG)n	Simple_repeat	1	26	(0)	3708141
14	24.7	1.8	3.5	chr7	101202084	101202139	(58143834)	+	G-rich	Low_complexity	1	57	(0)	3708233
287	28.0	4.8	4.8	chr7	101936930	101937053	(57408920)	C	MER5A	DNA/hAT-Charlie	(43)	146	23	3709965
22575	11.9	1.1	2.5	chr7	112641134	112647421	(46698552)	C	L1PA8A	LINE/L1	(9)	6307	126	3726128
628	33.5	0.5	0.0	chr7	122363550	122363764	(36982209)	+	MIRc	SINE/MIR	52	267	(1)	3738989
3987	13.7	14.4	3.2	chr7	122678822	122679810	(36666163)	+	MER11B	LTR/ERVK	1	1222	(14)	3739405
14	15.9	0.0	0.0	chr7	124765942	124765969	(34580004)	+	(CCT)n	Simple_repeat	1	28	(0)	3742264
7782	16.5	9.0	7.2	chr7	126040190	126041910	(33304063)	+	MER52A	LTR/ERV1	1	1755	(0)	3743921
14	21.2	7.2	4.5	chr7	128352153	128352235	(30993738)	+	(GCCAG)n	Simple_repeat	1	89	(0)	3747054
2060	3.2	0.0	0.8	chr7	144255822	144256073	(15089900)	+	L1PA2	LINE/L1	5906	6155	(0)	3772957
26	2.6	4.9	2.3	chr7	149091051	149091091	(10254882)	+	(CAGGGA)n	Simple_repeat	1	43	(0)	3780003
295	24.8	1.3	19.0	chr7	158468388	158468571	(877402)	C	MER5B	DNA/hAT-Charlie	(0)	178	28	3793275
228	30.4	7.3	6.5	chr7	158468591	158468713	(877260)	C	MIR3	SINE/MIR	(55)	153	30	3793276
1113	14.3	2.3	4.5	chr8	1802143	1802362	(143336274)	+	MER4D0	LTR/ERV1	3	217	(655)	3796118
21	0.0	0.0	0.0	chr8	10335251	10335273	(134803363)	+	(T)n	Simple_repeat	1	23	(0)	3807903
1467	20.2	3.9	1.0	chr8	10990581	10990882	(134147754)	C	AluJb	SINE/Alu	(1)	311	1	3808891
227	32.9	0.0	0.0	chr8	11467189	11467258	(133671378)	C	MIRb	SINE/MIR	(82)	186	117	3809627
12	8.9	4.2	0.0	chr8	15540512	15540535	(129598101)	+	(CTG)n	Simple_repeat	1	25	(0)	3815553
4580	25.2	7.4	4.8	chr8	15991295	15992852	(129145784)	C	L1M2	LINE/L1	(4572)	2994	1489	3816131
306	29.5	1.2	0.0	chr8	20270158	20270276	(124868360)	C	MIR1_Amn	SINE/MIR	(103)	127	4	3822553
11	24.9	0.0	2.5	chr8	23246999	23247038	(121891598)	+	(GGCGCG)n	Simple_repeat	1	40	(0)	3827599
183	29.4	5.2	1.1	chr8	23247039	23247131	(121891505)	+	L2b	LINE/L2	3263	3359	(16)	3827600
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
14	31.0	1.2	4.6	chr8	38468505	38468590	(106670046)	+	(GCCGCCC)n	Simple_repeat	1	87	(0)	3852337
673	24.6	3.3	0.0	chr8	38512378	38512552	(106626084)	C	MER5A	DNA/hAT-Charlie	(0)	189	9	3852426
244	27.4	6.2	1.9	chr8	38512553	38512660	(106625976)	C	L2b	LINE/L2	(315)	3060	2948	3852427
17	13.9	0.0	0.0	chr8	38512683	38512716	(106625920)	+	(ACAC)n	Simple_repeat	1	34	(0)	3852428
6185	13.7	2.7	0.3	chr8	39470484	39471435	(105667201)	+	LTR1D	LTR/ERV1	1	975	(0)	3853916
12	17.1	4.9	2.3	chr8	41895979	41896019	(103242617)	+	(CGCAGCC)n	Simple_repeat	1	43	(0)	3857794
11	29.7	1.8	1.8	chr8	47960107	47960161	(97178475)	+	(CCCGCT)n	Simple_repeat	1	56	(0)	3862668
2434	7.0	0.3	0.0	chr8	48007924	48008221	(97130415)	C	AluSx	SINE/Alu	(13)	299	1	3862761
14	8.9	11.1	0.0	chr8	48008411	48008446	(97130190)	+	(GTGC)n	Simple_repeat	1	40	(0)	3862762
25	12.2	0.0	0.0	chr8	49911552	49911588	(95227048)	+	(A)n	Simple_repeat	1	37	(0)	3865001
369	31.2	1.8	0.0	chr8	51370073	51370184	(93768452)	+	MIRb	SINE/MIR	86	199	(69)	3866704
24371	5.8	0.2	0.0	chr8	53695163	53700952	(91437684)	C	L1PA3	LINE/L1	(1)	6154	353	3869812
1121	11.4	3.7	0.0	chr8	53700950	53701133	(91437503)	C	L1PA3	LINE/L1	(5963)	192	2	3869812
7105	12.2	3.3	4.3	chr8	53701135	53702269	(91436367)	C	L1M1	LINE/L1	(2187)	3959	2828	3869813
28	0.0	0.0	0.0	chr8	54022277	54022302	(91116334)	+	(GCG)n	Simple_repeat	1	26	(0)	3870336
13	24.4	2.2	2.1	chr8	55103145	55103190	(90035446)	+	(CAG)n	Simple_repeat	1	47	(0)	3871977
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
17	14.6	0.0	6.8	chr8	60517072	60517115	(84621521)	+	(CGG)n	Simple_repeat	1	44	(0)	3879294
14	15.9	0.0	0.0	chr8	60517149	60517176	(84621460)	+	GA-rich	Low_complexity	1	28	(0)	3879295
14	15.2	0.0	7.1	chr8	64798490	64798531	(80340105)	+	G-rich	Low_complexity	1	42	(0)	3884941
26	0.0	0.0	0.0	chr8	69832995	69833019	(75305617)	+	(CCG)n	Simple_repeat	1	25	(0)	3892657
12	14.1	7.5	0.0	chr8	69834053	69834086	(75304550)	+	(GCGTGC)n	Simple_repeat	1	36	(0)	3892658
50	0.0	0.0	0.0	chr8	69834087	69834129	(75304507)	+	(CA)n	Simple_repeat	1	43	(0)	3892659
13	18.9	2.6	2.5	chr8	70033106	70033144	(75105492)	+	GA-rich	Low_complexity	1	40	(0)	3893145
5230	11.6	3.9	7.6	chr8	70470987	70471194	(74667442)	+	LTR1A2	LTR/ERV1	1	227	(610)	3893867
2204	9.1	0.0	0.8	chr8	70471195	70471458	(74667178)	+	AluSc	SINE/Alu	4	265	(44)	3893868
12086	14.3	1.0	0.9	chr8	70804981	70808319	(74330317)	+	L1PA10	LINE/L1	4	3355	(3106)	3894380
2227	11.9	0.0	0.3	chr8	71702632	71702924	(73435712)	C	AluSx1	SINE/Alu	(20)	292	1	3895561
995	27.7	4.2	7.7	chr8	71702925	71703062	(73435574)	+	L1ME3A	LINE/L1	5932	6059	(114)	3895555
346	27.0	3.7	4.1	chr8	71706573	71706774	(73431862)	C	MER102b	DNA/hAT-Charlie	(28)	303	108	3895566
2326	10.0	1.3	0.0	chr8	71706777	71707075	(73431561)	+	AluSg	SINE/Alu	1	303	(7)	3895567
23106	6.7	0.6	1.6	chr8	73234867	73241084	(71897552)	C	L1PA6	LINE/L1	(8)	6146	8	3897675
27	29.3	0.0	5.7	chr8	74321412	74321535	(70817101)	+	(CGC)n	Simple_repeat	1	124	(0)	3899515
27	15.9	1.7	1.7	chr8	80171332	80171405	(64967231)	+	(AGCCCA)n	Simple_repeat	1	74	(0)	3907148
3784	22.1	19.2	4.8	chr8	88751604	88752676	(56385960)	C	LTR2752	LTR/ERV1	(0)	1263	1	3919003
18	21.2	0.0	0.0	chr8	90082709	90082746	(55055890)	+	(GT)n	Simple_repeat	1	38	(0)	3920710
13	21.2	2.1	4.2	chr8	94642100	94642146	(50496490)	+	(CACCC)n	Simple_repeat	1	48	(0)	3927281
13	28.3	5.4	1.3	chr8	94720070	94720143	(50418493)	+	(GGCGGT)n	Simple_repeat	1	78	(0)	3927428
14	28.8	4.1	1.3	chr8	97776270	97776342	(47362294)	+	G-rich	Low_complexity	1	76	(0)	3932413
15	20.8	6.0	0.0	chr8	98974241	98974290	(46164346)	+	(GGCGC)n	Simple_repeat	1	53	(0)	3934521
16	8.7	0.0	0.0	chr8	100951980	100952004	(44186632)	+	(GGC)n	Simple_repeat	1	25	(0)	3937835
1058	26.9	10.4	2.2	chr8	102576844	102577258	(42561378)	C	LTR16B2	LTR/ERVL	(9)	453	1	3940662
345	32.1	7.1	4.1	chr8	102807682	102807942	(42330694)	C	L2b	LINE/L2	(179)	3208	2927	3941147
12	16.8	8.8	3.2	chr8	103299019	103299075	(41839561)	+	G-rich	Low_complexity	1	62	(0)	3942080
14	9.7	5.7	2.7	chr8	104466965	104466999	(40671637)	+	G-rich	Low_complexity	1	37	(0)	3943763
11	14.9	4.9	4.7	chr8	106658135	106658175	(38480461)	+	(GCCGGCCC)n	Simple_repeat	1	43	(0)	3946883
18	3.7	3.6	0.0	chr8	108787618	108787645	(36350991)	+	(GGCGG)n	Simple_repeat	1	29	(0)	3949880
561	25.3	3.2	6.7	chr8	108787879	108788073	(36350563)	C	MIRb	SINE/MIR	(46)	222	35	3949881
19	3.0	5.3	5.0	chr8	116938473	116938510	(28200126)	+	(GGC)n	Simple_repeat	1	40	(0)	3960865
235	22.1	11.3	4.4	chr8	119874443	119874532	(25264104)	+	MIRb	SINE/MIR	101	197	(71)	3965548
15	19.6	0.0	0.0	chr8	124998387	124998421	(20140215)	+	(GGCAGG)n	Simple_repeat	1	35	(0)	3974745
324	29.3	12.6	1.2	chr8	127823650	127823818	(17314818)	C	HAL1ME	LINE/L1	(288)	2177	1987	3980182
1856	14.4	4.1	0.0	chr8	127823911	127824188	(17314448)	+	AluJo	SINE/Alu	1	290	(22)	3980183
183	28.8	6.1	13.7	chr8	129983958	129984118	(15154518)	+	MER5B	DNA/hAT-Charlie	26	173	(5)	3984103
2851	12.3	6.4	2.2	chr8	131028987	131029435	(14109201)	+	MER1A	DNA/hAT-Charlie	59	527	(2)	3986205
29	16.0	4.9	3.5	chr8	132775354	132775435	(12363201)	+	(GGC)n	Simple_repeat	1	86	(0)	3989225
12	11.1	4.3	8.3	chr8	132775498	132775543	(12363093)	+	(CGCTC)n	Simple_repeat	1	48	(0)	3989226
583	28.1	8.0	0.0	chr8	141056440	141056692	(4081944)	C	MLT2F	LTR/ERVL	(108)	555	281	4003092
13	22.2	0.0	8.2	chr8	144049129	144049203	(1089433)	+	(CCCCGGC)n	Simple_repeat	1	68	(0)	4007029
12	16.4	2.1	8.2	chr8	144049273	144049320	(1089316)	+	(GGC)n	Simple_repeat	1	49	(0)	4007030
488	28.3	2.9	4.0	chr9	764332	764504	(137630213)	+	MIRb	SINE/MIR	9	179	(89)	4009687
820	12.6	0.0	0.0	chr9	764595	764705	(137630012)	+	AluSz	SINE/Alu	1	111	(201)	4009688
20	26.7	1.2	4.7	chr9	4490480	4490563	(133904154)	+	(GGC)n	Simple_repeat	1	85	(0)	4015146
12	16.9	2.9	2.8	chr9	4490628	4490662	(133904055)	+	(GCCCA)n	Simple_repeat	1	36	(0)	4015147
1864	12.7	0.3	7.1	chr9	6789041	6789218	(131605499)	C	AluJb	SINE/Alu	(9)	303	136	4018759
278	32.9	0.0	1.2	chr9	7186083	7186168	(131208549)	C	LTR88b	LTR/Gypsy?	(96)	741	657	4019349
407	23.7	35.4	6.5	chr9	16133529	16133872	(122260845)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	1	4031509
15	4.8	0.0	0.0	chr9	16192132	16192153	(122202564)	+	(CTG)n	Simple_repeat	1	22	(0)	4031597
15	14.9	2.6	2.5	chr9	17579384	17579422	(120815295)	+	(GCGCC)n	Simple_repeat	1	40	(0)	4033526
16	15.8	2.2	4.3	chr9	19408910	19408955	(118985762)	+	(AGGCG)n	Simple_repeat	1	47	(0)	4036276
25	25.5	4.2	4.0	chr9	25678153	25678272	(112716445)	+	(CGC)n	Simple_repeat	1	125	(0)	4044678
12	24.7	1.4	8.1	chr9	34380815	34380887	(104013830)	+	(GGCGG)n	Simple_repeat	1	74	(0)	4057338
20	4.1	0.0	0.0	chr9	34590167	34590191	(103804526)	+	(CA)n	Simple_repeat	1	25	(0)	4057645
791	29.7	4.2	4.8	chr9	35603505	35603961	(102790756)	C	Charlie29a	DNA/hAT-Charlie	(211)	508	55	4059151
416	29.5	0.0	1.8	chr9	35658839	35658952	(102735765)	+	MIRc	SINE/MIR	125	236	(32)	4059252
16	14.2	0.0	0.0	chr9	35665364	35665394	(102729323)	+	(GCAGG)n	Simple_repeat	1	31	(0)	4059258
305	33.5	12.2	0.0	chr9	35676506	35676678	(102718039)	C	L2c	LINE/L2	(0)	3387	3179	4059281
13	9.8	9.1	0.0	chr9	36036918	36036950	(102357767)	+	(AGCGGC)n	Simple_repeat	1	36	(0)	4059831
240	25.2	15.3	2.5	chr9	36572450	36572608	(101822109)	C	Charlie2a	DNA/hAT-Charlie	(2582)	279	97	4061004
15	20.0	6.0	5.7	chr9	36572773	36572855	(101821862)	+	(GTCCGC)n	Simple_repeat	1	88	(0)	4061005
19	17.5	2.7	7.8	chr9	37027606	37027680	(101367037)	+	(GCC)n	Simple_repeat	1	77	(0)	4061903
16	13.2	4.4	4.3	chr9	72364921	72364965	(66029752)	+	GA-rich	Low_complexity	1	47	(0)	4086363
18	11.0	4.9	2.3	chr9	72365284	72365324	(66029393)	+	(CGG)n	Simple_repeat	1	43	(0)	4086364
451	32.9	4.9	0.9	chr9	77631576	77631789	(60762928)	+	Charlie18a	DNA/hAT-Charlie	1	223	(119)	4094566
3145	19.5	6.7	2.3	chr9	77631790	77633008	(60761709)	+	MER52A	LTR/ERV1	1	1753	(2)	4094567
12	27.6	2.3	0.0	chr9	83062526	83062569	(55332148)	+	(CGT)n	Simple_repeat	1	45	(0)	4102320
2693	21.4	0.9	0.9	chr9	84862587	84863142	(53531575)	C	MER74A	LTR/ERVL	(2)	556	1	4105374
235	16.7	5.3	3.6	chr9	89318128	89318183	(49076534)	+	L2a	LINE/L2	3113	3169	(257)	4112397
378	25.4	4.2	8.4	chr9	92140794	92140954	(46253763)	+	MIR3	SINE/MIR	33	181	(27)	4116249
209	28.2	16.0	1.8	chr9	93365449	93365560	(45029157)	+	MIR3	SINE/MIR	15	145	(63)	4118049
16	0.0	0.0	0.0	chr9	96417977	96417996	(41976721)	+	(GGC)n	Simple_repeat	1	20	(0)	4122833
308	28.4	11.8	9.7	chr9	97696884	97697140	(40697577)	C	L1M4b	LINE/L1	(6203)	664	402	4124935
316	21.9	2.0	1.0	chr9	98105256	98105352	(40289365)	+	LTR33A_	LTR/ERVL	2	99	(432)	4125814
12	28.0	0.0	0.0	chr9	100473677	100473715	(37921002)	+	(GGC)n	Simple_repeat	1	39	(0)	4130227
16	14.3	0.0	6.8	chr9	100473999	100474042	(37920675)	+	G-rich	Low_complexity	1	44	(0)	4130228
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
15	26.3	5.4	1.3	chr9	107283703	107283776	(31110941)	+	G-rich	Low_complexity	1	78	(0)	4140362
14	24.5	2.3	0.0	chr9	107487983	107488025	(30906692)	+	(CGA)n	Simple_repeat	1	44	(0)	4140833
289	31.8	9.6	0.8	chr9	109316084	109316216	(29078501)	C	MIRb	SINE/MIR	(114)	154	9	4144242
618	23.8	5.5	4.5	chr9	109316363	109316560	(29078157)	+	L3b	LINE/CR1	4521	4720	(512)	4144243
1363	22.9	5.2	6.4	chr9	111106500	111106965	(27287752)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	8	4147318
16	26.6	0.0	2.0	chr9	111631460	111631510	(26763207)	+	(GCT)n	Simple_repeat	1	51	(0)	4148269
116	31.6	0.0	0.3	chr9	114369620	114369955	(24024762)	+	(TCATCA)n	Simple_repeat	1	336	(0)	4153521
851	12.0	0.8	0.8	chr9	114610940	114611064	(23783653)	+	AluJr	SINE/Alu	1	125	(187)	4154051
16	26.2	1.3	5.3	chr9	114611397	114611471	(23783246)	+	G-rich	Low_complexity	1	76	(0)	4154052
205	12.7	6.8	6.8	chr9	119964242	119964300	(18430417)	+	MIRc	SINE/MIR	69	127	(141)	4164058
206	25.1	0.0	0.0	chr9	120715023	120715079	(17679638)	C	MIR1_Amn	SINE/MIR	(90)	178	122	4165551
208	22.7	4.3	0.0	chr9	121546298	121546341	(16848376)	+	MIR3	SINE/MIR	109	154	(54)	4167229
690	20.8	1.4	0.0	chr9	121546353	121546496	(16848221)	C	MER5A1	DNA/hAT-Charlie	(0)	166	21	4167230
181	29.4	3.8	0.0	chr9	121735426	121735476	(16659241)	+	L2b	LINE/L2	3314	3366	(9)	4167644
733	13.2	0.0	3.3	chr9	122346541	122346661	(16048056)	C	AluJr	SINE/Alu	(76)	236	120	4168863
188	28.0	0.0	0.0	chr9	122346664	122346713	(16048004)	+	L2b	LINE/L2	3301	3350	(25)	4168864
484	36.0	4.3	3.8	chr9	124110555	124110664	(14284053)	C	MIRb	SINE/MIR	(14)	254	145	4171951
2731	9.6	0.3	1.4	chr9	124110665	124111032	(14283685)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4171952
220	29.5	7.8	2.0	chr9	124477476	124477584	(13917133)	C	MIRb	SINE/MIR	(93)	175	60	4172656
260	31.1	2.9	3.6	chr9	124868723	124868859	(13525858)	+	L2b	LINE/L2	3071	3206	(169)	4173428
16	15.3	0.0	5.0	chr9	124869136	124869175	(13525542)	+	(GGC)n	Simple_repeat	1	40	(0)	4173429
15	12.0	0.0	0.0	chr9	125746549	125746575	(12648142)	+	(CGG)n	Simple_repeat	1	27	(0)	4175276
19	12.9	2.2	4.3	chr9	125746742	125746787	(12647930)	+	(GCG)n	Simple_repeat	1	47	(0)	4175277
61	9.4	0.0	0.0	chr9	126082982	126083072	(12311645)	+	(TGTG)n	Simple_repeat	1	91	(0)	4175820
322	32.1	8.9	9.8	chr9	126886192	126886509	(11508208)	+	L2c	LINE/L2	3071	3385	(2)	4177244
241	28.1	11.6	0.9	chr9	126886750	126886864	(11507853)	+	MIRc	SINE/MIR	2	130	(138)	4177245
484	30.6	3.9	5.1	chr9	127123251	127123484	(11271233)	+	MIRb	SINE/MIR	5	235	(33)	4177653
479	28.2	14.6	1.8	chr9	127926782	127927001	(10467716)	+	MIRb	SINE/MIR	6	258	(10)	4179351
248	34.8	5.0	1.7	chr9	127926972	127927088	(10467629)	+	MIR3	SINE/MIR	25	145	(63)	4179352
239	31.2	14.7	7.1	chr9	128361862	128362030	(10032687)	C	MIRc	SINE/MIR	(83)	185	2	4180343
16	12.3	0.0	7.3	chr9	130461192	130461232	(7933485)	+	(GGTG)n	Simple_repeat	1	41	(0)	4185060
2146	7.2	0.4	0.0	chr9	131372738	131373015	(7021702)	C	AluSg	SINE/Alu	(31)	279	1	4186946
320	32.7	3.2	1.9	chr9	131776501	131776656	(6618061)	C	MIR3	SINE/MIR	(7)	201	44	4187689
18	27.5	0.0	0.0	chr9	132582025	132582072	(5812645)	+	GA-rich	Low_complexity	1	48	(0)	4189187
184	34.2	16.3	1.7	chr9	133336544	133336778	(5057939)	C	L2a	LINE/L2	(23)	3403	3128	4190431
186	30.4	11.4	3.1	chr9	133526626	133526849	(4867868)	+	L2b	LINE/L2	2827	3071	(348)	4190725
329	32.1	7.5	3.7	chr9	133526938	133527128	(4867589)	+	L2b	LINE/L2	3175	3373	(2)	4190725
695	27.1	8.6	6.3	chr9	135413036	135413398	(2981319)	C	MLT1A	LTR/ERVL-MaLR	(2)	372	1	4193177
56	24.9	3.1	6.4	chr9	136133052	136133340	(2261377)	+	(CCGCC)n	Simple_repeat	1	298	(0)	4194068
17	22.3	6.0	3.4	chr9	136866032	136866114	(1528603)	+	(CCAGCCC)n	Simple_repeat	1	88	(0)	4194887
14	14.2	0.0	3.0	chr9	136866127	136866159	(1528558)	+	(CCCGG)n	Simple_repeat	1	33	(0)	4194888
29	0.0	0.0	0.0	chrX	323924	323948	(155716947)	+	(TG)n	Simple_repeat	1	25	(0)	4358414
331	21.2	6.4	3.6	chrX	501726	503014	(155537881)	+	(AC)n	Simple_repeat	1	1371	(0)	4358749
1901	9.3	0.8	3.3	chrX	1204857	1205126	(154835769)	C	AluSz	SINE/Alu	(49)	263	1	4360419
234	30.7	1.3	0.0	chrX	1418347	1418421	(154622474)	+	MLT1J	LTR/ERVL-MaLR	231	306	(206)	4360948
309	22.9	6.8	0.0	chrX	1418461	1418556	(154622339)	+	MLT1J	LTR/ERVL-MaLR	211	313	(199)	4360949
165	29.9	0.4	0.6	chrX	1419907	1420411	(154620484)	+	(TCTC)n	Simple_repeat	1	507	(0)	4360950
11	7.5	6.7	3.1	chrX	37685777	37685806	(118355089)	+	(CCAGGT)n	Simple_repeat	1	32	(0)	4417771
15	28.4	0.0	4.6	chrX	37685891	37685955	(118354940)	+	(GCC)n	Simple_repeat	1	65	(0)	4417772
18	22.4	3.4	1.6	chrX	91434948	91435006	(64605889)	+	(GTCT)n	Simple_repeat	1	61	(0)	4483498
6868	19.2	7.9	1.7	chrX	107324381	107325881	(48715014)	+	MER52A	LTR/ERV1	46	1755	(0)	4503988
14	14.6	0.0	3.1	chrX	133985348	133985379	(22055516)	+	(GGC)n	Simple_repeat	1	32	(0)	4541901
51	29.3	1.3	4.6	chrX	133985596	133985833	(22055062)	+	G-rich	Low_complexity	1	241	(0)	4541902