3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
13	5.3	0.0	0.0	chr1	19485439	19485458	(229470964)	+	(GGC)n	Simple_repeat	1	20	(0)	33724
1370	28.3	6.8	2.6	chr1	19953752	19954122	(229002300)	+	LTR33	LTR/ERVL	1	393	(122)	34835
2201	19.4	3.9	3.1	chr1	19954123	19954579	(229001843)	C	LOR1b	LTR/ERV1	(0)	461	1	34836
729	26.4	1.1	2.2	chr1	28448229	28448410	(220508012)	+	AluJb	SINE/Alu	131	310	(2)	54229
29	0.0	0.0	4.8	chr1	28448418	28448459	(220507963)	+	(GGAAA)n	Simple_repeat	1	42	(0)	54230
2489	6.0	0.0	3.2	chr1	28448471	28448785	(220507637)	+	AluY	SINE/Alu	1	305	(6)	54231
13	20.6	2.4	2.4	chr1	28518618	28518658	(220437764)	+	(GCGG)n	Simple_repeat	1	42	(0)	54411
310	31.2	6.9	4.3	chr1	28519028	28519305	(220437117)	C	L2b	LINE/L2	(161)	3214	2910	54412
1155	14.4	0.0	0.0	chr1	30032066	30032225	(218924197)	C	AluSz6	SINE/Alu	(0)	312	153	57714
2327	15.6	2.2	0.0	chr1	30032228	30032619	(218923803)	+	LOR1a	LTR/ERV1	95	495	(2)	57713
3297	16.3	2.8	0.2	chr1	30032650	30033271	(218923151)	C	L1MA4	LINE/L1	(0)	6300	5662	57715
1972	14.2	3.5	0.7	chr1	30775928	30776230	(218180192)	+	AluSz	SINE/Alu	1	312	(0)	59036
170	2.3	0.0	6.2	chr1	30776231	30776487	(218179935)	+	(GGAAA)n	Simple_repeat	1	257	(0)	59037
260	27.7	2.1	5.0	chr1	32248100	32248198	(216708224)	C	MER5B	DNA/hAT-Charlie	(49)	129	34	62399
14	19.1	0.0	2.6	chr1	32248485	32248522	(216707900)	+	(GAGCCG)n	Simple_repeat	1	38	(0)	62400
12	11.1	0.0	8.6	chr1	32973105	32973139	(215983283)	+	(GCCCCC)n	Simple_repeat	1	35	(0)	64134
12	16.5	0.0	0.0	chr1	32973206	32973232	(215983190)	+	G-rich	Low_complexity	1	27	(0)	64135
22	12.8	0.0	0.0	chr1	32973436	32973469	(215982953)	+	(T)n	Simple_repeat	1	34	(0)	64136
6293	8.6	2.1	15.4	chr1	32973471	32975836	(215980586)	C	SVA_E	Retroposon/SVA	(0)	1382	50	64137
1481	15.7	20.7	0.6	chr1	36414286	36414666	(212541756)	+	LOR1a	LTR/ERV1	40	497	(0)	70824
12	34.1	0.0	0.0	chr1	36414708	36414759	(212541663)	+	(TTCCTTC)n	Simple_repeat	1	52	(0)	70825
2400	17.4	3.0	2.6	chr1	38982105	38982475	(209973947)	+	LOR1b	LTR/ERV1	89	460	(1)	75781
477	27.8	5.2	12.6	chr1	38982476	38982775	(209973647)	C	L1M5	LINE/L1	(2369)	3777	3483	75764
2121	16.0	10.4	0.2	chr1	42587849	42588262	(206368160)	C	LOR1b	LTR/ERV1	(0)	461	1	82786
1867	12.7	8.7	1.5	chr1	43250815	43251157	(205705265)	C	LOR1-int	LTR/ERV1	(7749)	371	2	84035
1934	17.7	10.4	1.4	chr1	43251159	43251577	(205704845)	C	LOR1b	LTR/ERV1	(0)	461	1	84035
1989	17.4	12.8	0.2	chr1	43258149	43258550	(205697872)	C	LOR1b	LTR/ERV1	(0)	461	2	84044
597	27.0	15.9	2.9	chr1	50917167	50917509	(198038913)	+	L1MEc	LINE/L1	5	400	(5835)	97626
97	2.4	0.0	5.5	chr1	50917568	50917712	(198038710)	+	(AAGGA)n	Simple_repeat	1	145	(0)	97627
280	22.4	0.0	0.0	chr1	50917806	50917863	(198038559)	+	L1ME2	LINE/L1	5193	5250	(896)	97628
616	20.4	0.0	0.0	chr1	50917858	50917989	(198038433)	+	L1ME2	LINE/L1	5850	5981	(183)	97628
6574	10.5	2.1	2.6	chr1	53185249	53186207	(195770215)	C	LTR13_	LTR/ERVK	(0)	954	1	102618
7059	11.0	1.7	2.2	chr1	53444448	53445459	(195510963)	+	LTR13	LTR/ERVK	1	1007	(0)	103096
287	30.3	5.7	0.0	chr1	54541903	54542001	(194414421)	+	L2b	LINE/L2	3267	3371	(4)	105333
23	5.7	2.6	2.5	chr1	59297041	59297079	(189659343)	+	(CCT)n	Simple_repeat	1	40	(0)	114621
5802	15.5	1.9	5.6	chr1	59490340	59490994	(189465428)	C	L1MA5A	LINE/L1	(823)	5320	4706	114956
122	1.5	0.0	5.3	chr1	59490995	59491145	(189465277)	+	(CTTC)n	Simple_repeat	1	151	(0)	114958
41	24.9	2.5	0.0	chr1	61082191	61082308	(187874114)	+	(GAGC)n	Simple_repeat	1	121	(0)	117647
16	18.9	0.0	0.0	chr1	61082351	61082380	(187874042)	+	(C)n	Simple_repeat	1	30	(0)	117648
22	19.3	6.8	4.5	chr1	61082380	61082482	(187873940)	+	(CGCGG)n	Simple_repeat	1	110	(0)	117649
37	4.1	5.9	0.0	chr1	61082673	61082723	(187873699)	+	(TC)n	Simple_repeat	1	54	(0)	117650
15	18.9	6.2	0.0	chr1	61082727	61082774	(187873648)	+	(CACGCA)n	Simple_repeat	1	51	(0)	117651
20	24.2	0.0	5.3	chr1	61082849	61082923	(187873499)	+	G-rich	Low_complexity	1	75	(0)	117652
22	22.4	0.0	0.0	chr1	61082925	61082980	(187873442)	+	(GT)n	Simple_repeat	1	56	(0)	117653
10167	11.0	4.4	1.4	chr1	67066962	67068493	(181887929)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	128170
200	29.7	17.9	0.0	chr1	68343064	68343127	(180613295)	C	MIR3	SINE/MIR	(86)	122	45	130514
3231	14.1	0.0	0.2	chr1	69303830	69304327	(179652095)	+	LOR1a	LTR/ERV1	1	497	(0)	131862
702	34.8	7.5	8.4	chr1	69304355	69304826	(179651596)	C	L2a	LINE/L2	(259)	3167	2717	131863
18	33.5	0.0	0.0	chr1	74732595	74732668	(174223754)	+	G-rich	Low_complexity	1	74	(0)	139078
24263	7.3	0.4	0.4	chr1	75175682	75181832	(173774590)	C	L1PA6	LINE/L1	(11)	6143	5	139621
4175	11.3	0.1	3.7	chr1	75181844	75182364	(173774058)	C	L1PB1	LINE/L1	(840)	5306	4794	139619
84	36.9	2.3	1.2	chr1	78355018	78355416	(170601006)	+	(TCT)n	Simple_repeat	1	408	(0)	144481
5531	25.8	3.2	1.4	chr1	78551852	78553693	(170402729)	+	L1PA15-16	LINE/L1	80	1825	(5324)	144736
716	28.6	1.0	5.1	chr1	78553691	78553907	(170402515)	+	L1PA17	LINE/L1	584	791	(6082)	144738
18005	16.4	1.8	3.0	chr1	78554032	78559469	(170396953)	+	L1PA17	LINE/L1	1235	6593	(0)	144738
7314	23.3	5.4	3.0	chr1	82777456	82780772	(166175650)	+	MER66-int	LTR/ERV1	15	3413	(3263)	150282
790	28.1	12.4	5.0	chr1	84613936	84614000	(164342422)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	436	152794
1768	13.5	18.0	0.5	chr1	84614001	84614379	(164342043)	C	LOR1b	LTR/ERV1	(1)	460	1	152795
790	28.1	12.4	5.0	chr1	84614380	84614691	(164341731)	C	MLT1J	LTR/ERVL-MaLR	(77)	435	104	152794
2281	19.9	3.3	0.2	chr1	89218079	89218525	(159737897)	C	LOR1b	LTR/ERV1	(0)	461	1	159625
3065	14.5	7.7	7.2	chr1	93108076	93108766	(155847656)	C	L1M4b	LINE/L1	(4291)	2576	1888	165739
15	12.2	0.0	0.0	chr1	93909201	93909227	(155047195)	+	(GCGG)n	Simple_repeat	1	27	(0)	167023
18	30.7	1.3	2.5	chr1	93909334	93909412	(155047010)	+	(CGG)n	Simple_repeat	1	80	(0)	167024
146	15.8	4.7	4.4	chr1	100065435	100065575	(148890847)	+	(CCTTTC)n	Simple_repeat	1	141	(0)	175897
26	0.0	0.0	0.0	chr1	100065576	100065600	(148890822)	+	(TTCCC)n	Simple_repeat	1	25	(0)	175898
146	15.8	4.7	4.4	chr1	100065601	100065868	(148890554)	+	(CCTTTC)n	Simple_repeat	6	270	(0)	175899
513	15.8	1.3	0.0	chr1	100065896	100065971	(148890451)	C	7SLRNA	srpRNA	(243)	77	1	175900
7674	13.1	13.4	4.7	chr1	112894526	112895956	(136060466)	+	LTR12C	LTR/ERV1	4	1579	(0)	194004
13	25.3	1.8	3.6	chr1	113812295	113812349	(135144073)	+	(GCCC)n	Simple_repeat	1	56	(0)	195565
2920	15.0	0.4	0.2	chr1	116003827	116004286	(132952136)	+	LOR1b	LTR/ERV1	1	461	(0)	199054
19635	16.4	2.6	1.2	chr1	116004287	116004375	(132952047)	C	L1M1	LINE/L1	(7457)	108	16	199052
3860	15.3	4.6	1.2	chr1	116004373	116005188	(132951234)	C	L1MD	LINE/L1	(2164)	3982	3138	199055
25877	4.0	0.1	0.2	chr1	117352563	117358724	(131597698)	C	L1PA3	LINE/L1	(0)	6155	3	201189
2552	26.9	6.5	4.0	chr1	117358724	117359722	(131596700)	C	L1MEi	LINE/L1	(1186)	1026	1	201182
19	26.9	0.0	2.9	chr1	120176851	120176920	(128779502)	+	(TATTTTA)n	Simple_repeat	1	70	(0)	205122
2109	16.6	3.0	0.0	chr1	120477710	120478070	(128478352)	C	LOR1b	LTR/ERV1	(2)	459	88	205610
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
271	30.2	13.5	3.3	chr1	145845057	145845268	(103111154)	C	L2c	LINE/L2	(619)	2800	2564	211639
257	26.4	5.2	4.2	chr1	145845402	145845496	(103110926)	C	L3	LINE/CR1	(1626)	2473	2378	211637
24	15.6	1.1	0.0	chr1	148522481	148522534	(100433888)	+	G-rich	Low_complexity	1	54	(0)	215837
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
2079	17.2	3.0	0.0	chr1	149043790	149044150	(99912272)	+	LOR1b	LTR/ERV1	88	459	(2)	216600
1780	15.8	1.4	3.0	chr1	150909270	150909566	(98046856)	+	AluJb	SINE/Alu	1	292	(20)	220090
1838	13.5	16.6	8.3	chr1	150909567	150909693	(98046729)	C	L1MB8	LINE/L1	(985)	5161	4968	220085
2100	18.4	3.3	5.5	chr1	150909694	150910105	(98046317)	C	LOR1b	LTR/ERV1	(0)	461	61	220091
2175	10.4	0.4	0.0	chr1	150910106	150910428	(98045994)	C	AluSx	SINE/Alu	(0)	312	2	220092
13	17.2	4.9	2.3	chr1	161389847	161389887	(87566535)	+	(CTCCG)n	Simple_repeat	1	43	(0)	237441
18	25.5	2.3	5.6	chr1	161440260	161440347	(87516075)	+	(CCCG)n	Simple_repeat	1	90	(0)	237537
1223	21.6	7.2	3.6	chr1	168707948	168708279	(80248143)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	248786
607	25.3	7.8	1.8	chr1	169033984	169034152	(79922270)	C	MIRb	SINE/MIR	(10)	258	79	249331
2456	15.3	0.0	0.8	chr1	169034183	169034550	(79921872)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	249332
6145	12.1	2.3	2.8	chr1	171404641	171405599	(77550823)	C	LTR13_	LTR/ERVK	(0)	954	1	252639
4463	13.1	1.4	0.3	chr1	171681794	171682523	(77273899)	C	L1MB3	LINE/L1	(2)	6181	5444	253162
19	16.9	0.0	7.1	chr1	171682524	171682529	(77273893)	+	(TCCCT)n	Simple_repeat	1	54	(0)	253163
29	6.6	4.2	0.0	chr1	171682530	171682577	(77273845)	+	(CCCTCC)n	Simple_repeat	1	50	(0)	253164
45	2.2	0.0	0.0	chr1	171682580	171682625	(77273797)	+	(CCTTT)n	Simple_repeat	1	46	(0)	253165
1776	11.7	3.6	6.7	chr1	171682634	171682916	(77273506)	C	AluSz	SINE/Alu	(37)	275	2	253166
27768	6.8	1.9	1.4	chr1	173684303	173688508	(75267914)	C	HERVIP10FH-int	LTR/ERV1	(0)	5102	864	255944
52	22.3	0.0	0.0	chr1	173688514	173688620	(75267802)	+	(CT)n	Simple_repeat	1	107	(0)	255945
411	13.6	4.0	2.8	chr1	173688627	173688905	(75267517)	C	HERVIP10F-int	LTR/ERV1	(1237)	4137	3988	255946
1345	16.4	7.2	2.9	chr1	180731146	180731227	(68225195)	C	MER33	DNA/hAT-Charlie	(2)	322	244	266868
2018	16.5	11.9	0.7	chr1	180731228	180731636	(68224786)	C	LOR1b	LTR/ERV1	(0)	461	1	266869
17982	10.2	5.4	4.8	chr1	183769873	183770441	(65185981)	C	LOR1-int	LTR/ERV1	(6350)	611	1	271616
2938	12.7	4.8	0.2	chr1	183770442	183770915	(65185507)	C	LOR1a	LTR/ERV1	(0)	497	1	271616
2355	10.8	0.3	0.0	chr1	183774567	183774873	(65181549)	C	AluSx4	SINE/Alu	(2)	308	1	271629
2588	13.8	4.3	3.5	chr1	183774874	183775233	(65181189)	+	LOR1b	LTR/ERV1	105	461	(0)	271628
2992	15.4	1.0	0.6	chr1	189380101	189380582	(59575840)	+	LOR1a	LTR/ERV1	13	496	(1)	279481
1764	19.9	10.6	0.5	chr1	195136936	195137349	(53819073)	+	LOR1b	LTR/ERV1	1	461	(0)	287058
1481	11.2	22.3	0.0	chr1	195485855	195486087	(53470335)	+	AluSq2	SINE/Alu	1	300	(13)	287491
1634	18.0	2.3	7.0	chr1	195486088	195486306	(53470116)	C	MER61A	LTR/ERV1	(129)	212	1	287489
3105	14.3	0.6	0.2	chr1	195486321	195486811	(53469611)	C	LOR1a	LTR/ERV1	(4)	493	1	287492
1574	20.4	4.5	0.0	chr1	195720689	195720982	(53235440)	+	AluJb	SINE/Alu	1	308	(4)	287763
882	20.7	1.9	1.2	chr1	195721307	195721489	(53234933)	+	MER57C2	LTR/ERV1	102	272	(139)	287762
3422	9.2	2.2	0.0	chr1	195721490	195721970	(53234452)	C	LTR14C	LTR/ERVK	(0)	587	96	287764
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
485	29.6	12.1	1.4	chr1	206762824	206763070	(42193352)	C	L1MC4	LINE/L1	(4986)	1229	985	305658
2361	15.9	5.2	3.8	chr1	211859473	211859924	(37096498)	C	LOR1b	LTR/ERV1	(2)	459	1	313513
13	15.3	0.0	9.1	chr1	212568950	212568993	(36387429)	+	(TTAAT)n	Simple_repeat	1	44	(0)	314773
25	29.5	2.5	3.2	chr1	212569118	212569237	(36387185)	+	(TTTC)n	Simple_repeat	1	123	(0)	314774
2395	16.3	6.0	1.9	chr1	219346050	219346525	(29609897)	C	LOR1a	LTR/ERV1	(0)	497	1	324480
251	29.2	0.0	5.0	chr1	220732912	220733012	(28223410)	+	MIRc	SINE/MIR	161	256	(12)	326657
306	30.5	14.3	2.0	chr1	220733353	220733553	(28222869)	C	MER102c	DNA/hAT-Charlie	(85)	246	17	326658
2137	12.1	1.2	1.2	chr1	222064954	222065262	(26891160)	+	LOR1a	LTR/ERV1	17	329	(168)	328596
235	16.3	12.2	0.0	chr1	222065262	222065304	(26891118)	C	LOR1b	LTR/ERV1	(62)	399	351	328597
1174	11.2	0.0	0.0	chr1	222065363	222065523	(26890899)	+	LOR1a	LTR/ERV1	337	497	(0)	328596
285	23.9	4.3	1.1	chr1	222065574	222065662	(26890760)	+	MARNA	DNA/TcMar-Mariner	245	336	(250)	328598
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
1656	19.5	0.7	0.3	chr1	228092171	228092457	(20863965)	+	AluJr	SINE/Alu	5	292	(20)	338281
2327	9.1	0.0	0.0	chr1	228621129	228621435	(20334987)	+	AluY	SINE/Alu	1	307	(4)	338912
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
41	24.7	5.6	3.4	chr1	229271387	229271584	(19684838)	+	(GGCGCGG)n	Simple_repeat	1	209	(0)	339986
15	10.8	3.3	0.0	chr1	229271623	229271652	(19684770)	+	(TTGCTC)n	Simple_repeat	1	31	(0)	339987
975	24.6	8.9	3.7	chr1	230509301	230509415	(18447007)	C	MER21C	LTR/ERVL	(83)	855	743	341990
1860	14.8	17.3	1.0	chr1	230509416	230509830	(18446592)	C	LOR1a	LTR/ERV1	(0)	497	1	341991
975	24.6	8.9	3.7	chr1	230509831	230510064	(18446358)	C	MER21C	LTR/ERVL	(196)	742	486	341990
123	23.1	3.2	4.9	chr1	232031107	232031540	(16924882)	+	GA-rich	Low_complexity	1	448	(0)	344404
2224	17.7	2.2	5.2	chr1	232763428	232763903	(16192519)	+	LOR1b	LTR/ERV1	1	461	(0)	345392
2537	14.8	2.6	0.0	chr1	233465859	233466312	(15490110)	+	LTR12E	LTR/ERV1	1	466	(856)	346446
1845	12.9	4.1	4.0	chr1	233466311	233466648	(15489774)	+	LTR12D	LTR/ERV1	828	1132	(122)	346447
594	27.6	20.0	2.0	chr1	235411759	235412157	(13544265)	+	L2	LINE/L2	1723	2211	(1208)	349695
61	4.6	2.0	4.0	chr1	235412158	235412256	(13544166)	+	(TCCCC)n	Simple_repeat	1	101	(0)	349696
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
4604	14.0	6.1	1.3	chr1	237237350	237237905	(11718517)	+	MER4D	LTR/ERV1	1	593	(310)	352990
56	0.0	0.0	8.5	chr1	237237906	237237987	(11718435)	+	(TTTCC)n	Simple_repeat	1	82	(0)	352991
1657	11.7	5.0	6.0	chr1	237237989	237238270	(11718152)	C	AluJb	SINE/Alu	(33)	279	1	352992
4284	16.2	4.6	5.0	chr1	239455351	239455910	(9500512)	+	Tigger3b	DNA/TcMar-Tigger	339	900	(331)	356146
1232	18.9	16.9	3.1	chr1	239455898	239456251	(9500171)	C	LOR1b	LTR/ERV1	(48)	413	1	356148
4329	13.0	1.1	1.9	chr1	240393117	240393846	(8562576)	+	Tigger1	DNA/TcMar-Tigger	1	724	(1694)	357563
3184	11.0	0.8	0.2	chr1	240393861	240394342	(8562080)	C	LOR1a	LTR/ERV1	(12)	485	1	357564
9585	12.3	4.9	2.5	chr1	240394343	240394685	(8561737)	+	Tigger1	DNA/TcMar-Tigger	716	1077	(1341)	357565
1694	22.9	10.5	4.4	chr1	241464181	241464456	(7491966)	+	MER92B	LTR/ERV1	179	497	(139)	359318
2264	12.3	0.0	1.0	chr1	241464457	241464766	(7491656)	+	AluSx	SINE/Alu	2	308	(4)	359320
2022	16.6	12.6	4.5	chr1	242843573	242843843	(6112579)	C	LOR1b	LTR/ERV1	(0)	461	162	361619
2331	11.7	0.0	1.0	chr1	242843844	242844142	(6112280)	C	AluSx1	SINE/Alu	(16)	296	1	361620
2168	17.9	0.0	3.5	chr1	242966306	242966709	(5989713)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	361802
243	28.7	6.2	8.2	chr1	242966897	242966975	(5989447)	+	MER5B	DNA/hAT-Charlie	1	75	(103)	361803
3512	11.3	0.4	1.0	chr1	242966976	242967475	(5988947)	C	LOR1a	LTR/ERV1	(0)	497	1	361804
200	28.2	3.7	2.8	chr1	243979767	243979872	(4976550)	C	L2a	LINE/L2	(54)	3372	3266	363402
19	24.9	1.4	4.1	chr1	244451927	244451998	(4504424)	+	(CCCGC)n	Simple_repeat	1	73	(0)	364209
2365	18.2	3.7	0.5	chr10	6511459	6511904	(127285518)	C	LOR1b	LTR/ERV1	(0)	461	1	379624
7214	10.6	1.6	0.5	chr10	13082028	13083023	(120714399)	C	LTR13	LTR/ERVK	(0)	1007	1	390070
14	10.7	0.0	5.9	chr10	21527274	21527307	(112270115)	+	G-rich	Low_complexity	1	34	(0)	403873
350	8.6	1.8	8.7	chr10	23330962	23331762	(110465660)	+	G-rich	Low_complexity	1	815	(0)	406629
2387	9.0	0.0	0.0	chr10	23422448	23422748	(110374674)	C	AluY	SINE/Alu	(9)	302	2	406859
1255	14.2	0.9	7.1	chr10	23422749	23422809	(110374613)	C	AluJr4	SINE/Alu	(170)	142	88	406858
271	21.1	5.3	6.6	chr10	23422841	23422916	(110374506)	+	FRAM	SINE/Alu	72	146	(20)	406860
22	23.1	6.7	2.1	chr10	23422917	23423006	(110374416)	+	G-rich	Low_complexity	1	96	(0)	406861
199	32.5	0.0	4.7	chr10	23423030	23423114	(110374308)	+	MIR	SINE/MIR	183	262	(6)	406862
1687	12.1	3.1	4.1	chr10	24371926	24372103	(109425319)	+	L1PA16	LINE/L1	5867	6045	(121)	408398
2112	17.9	6.9	1.6	chr10	24372104	24372539	(109424883)	C	LOR1b	LTR/ERV1	(0)	461	1	408399
1052	16.8	2.5	0.0	chr10	26196799	26196995	(107600427)	C	L1MA4	LINE/L1	(0)	6300	6099	411274
2094	17.6	11.1	0.0	chr10	26197035	26197444	(107599978)	C	LOR1b	LTR/ERV1	(0)	461	1	411275
3461	10.2	0.8	1.0	chr10	29675815	29676308	(104121114)	+	LOR1a	LTR/ERV1	5	497	(0)	417251
15	0.0	0.0	0.0	chr10	29676378	29676394	(104121028)	+	(GT)n	Simple_repeat	1	17	(0)	417252
1760	19.9	13.4	1.2	chr10	30924091	30924172	(102873250)	+	L1MD3	LINE/L1	7415	7496	(499)	419555
2475	15.7	4.8	0.7	chr10	30924173	30924614	(102872808)	C	LOR1b	LTR/ERV1	(0)	461	1	419556
19	16.9	2.0	2.0	chr10	31032472	31032520	(102764902)	+	(GCTCCCG)n	Simple_repeat	1	50	(0)	419723
2345	9.0	0.3	0.3	chr10	31032772	31033070	(102764352)	C	AluSc	SINE/Alu	(10)	299	1	419724
17117	6.8	0.3	1.4	chr10	32641001	32642799	(101154623)	C	L1PA4	LINE/L1	(4356)	1799	7	422207
1963	18.2	2.2	7.2	chr10	32975216	32975701	(100821721)	+	LOR1b	LTR/ERV1	1	461	(0)	422555
2279	17.6	6.5	0.5	chr10	36425999	36426431	(97370991)	+	LOR1b	LTR/ERV1	1	461	(0)	427983
1777	20.3	2.6	5.6	chr10	52511375	52511802	(81285620)	C	LOR1-int	LTR/ERV1	(7704)	416	2	446389
3269	13.9	0.2	0.0	chr10	52511804	52512299	(81285123)	C	LOR1a	LTR/ERV1	(0)	497	1	446389
10387	15.8	3.7	0.7	chr10	53641176	53641921	(80155501)	C	Tigger2	DNA/TcMar-Tigger	(1)	2717	1914	447852
1762	19.6	10.4	1.0	chr10	53930521	53930937	(79866485)	+	LOR1b	LTR/ERV1	1	461	(0)	448242
2174	20.1	3.0	2.2	chr10	54144276	54144732	(79652690)	+	LOR1b	LTR/ERV1	1	461	(0)	448487
216	40.9	3.7	0.7	chr10	54144733	54144916	(79652506)	C	MIRc	SINE/MIR	(18)	190	3	448490
1862	15.7	4.0	0.0	chr10	54387593	54387904	(79409518)	+	LOR1b	LTR/ERV1	137	461	(0)	448815
1095	16.2	4.5	0.5	chr10	54387905	54388115	(79409307)	+	L1MB2	LINE/L1	5918	6137	(46)	448813
24	18.8	4.3	7.0	chr10	55608233	55608362	(78189060)	+	GA-rich	Low_complexity	1	126	(0)	450397
2362	16.7	2.2	0.7	chr10	55608563	55608973	(78188449)	C	LOR1b	LTR/ERV1	(0)	461	45	450398
16	8.0	3.5	3.3	chr10	55608992	55609015	(78188407)	+	(TA)n	Simple_repeat	1	25	(0)	450399
1827	18.8	4.0	0.6	chr10	56771083	56771440	(77025982)	C	LOR1-int	LTR/ERV1	(7749)	371	1	451858
2060	20.5	2.8	1.8	chr10	56771441	56771896	(77025526)	C	LOR1b	LTR/ERV1	(0)	461	1	451858
358	26.3	2.9	4.8	chr10	59881753	59881856	(73915566)	C	L4_A_Mam	LINE/RTE-X	(310)	4680	4579	456237
2528	8.2	0.0	0.0	chr10	59882679	59882970	(73914452)	+	AluSc8	SINE/Alu	1	292	(19)	456238
2121	16.6	7.2	0.9	chr10	60015626	60016057	(73781365)	+	LOR1b	LTR/ERV1	1	461	(0)	456477
229	33.5	1.7	3.6	chr10	60016314	60016442	(73780980)	C	MER5B	DNA/hAT-Charlie	(51)	138	2	456478
412	26.1	2.7	20.7	chr10	71303344	71303570	(62493852)	+	MER91B	DNA/hAT-Tip100	4	188	(2)	474961
380	29.1	6.3	0.6	chr10	71303661	71303840	(62493582)	C	MER103C	DNA/hAT-Charlie	(45)	252	62	474962
6278	11.4	1.2	2.3	chr10	71955959	71956922	(61840500)	+	LTR13_	LTR/ERVK	1	954	(0)	476257
2189	16.8	0.0	0.5	chr10	80587580	80587956	(53209466)	C	L1PA16	LINE/L1	(0)	6166	5792	491469
2268	19.7	3.3	1.3	chr10	80588034	80588485	(53208937)	C	LOR1b	LTR/ERV1	(0)	461	1	491470
2103	16.7	0.3	1.3	chr10	89294693	89295004	(44502418)	+	AluJb	SINE/Alu	1	309	(3)	504166
68	3.6	0.0	0.0	chr10	89295005	89295089	(44502333)	+	(GGAAA)n	Simple_repeat	1	85	(0)	504167
1943	18.1	12.8	0.7	chr10	91605848	91606252	(42191170)	+	LOR1b	LTR/ERV1	1	461	(0)	507570
557	30.3	8.7	10.4	chr10	91606253	91606621	(42190801)	C	Tigger15a	DNA/TcMar-Tigger	(183)	532	170	507569
402	7.1	8.0	0.5	chr10	97251079	97251792	(36545630)	+	GA-rich	Low_complexity	1	771	(0)	517560
1895	17.5	12.6	0.5	chr10	99183358	99183760	(34613662)	+	LOR1b	LTR/ERV1	3	461	(0)	521044
2767	23.4	4.5	9.1	chr10	99183761	99184243	(34613179)	+	L1MEc	LINE/L1	478	953	(5447)	521042
5876	13.6	6.5	2.4	chr10	102057519	102058483	(31738939)	+	LTR13	LTR/ERVK	1	1007	(0)	526193
2394	16.9	3.7	2.6	chr10	102185117	102185572	(31611850)	+	LOR1b	LTR/ERV1	1	461	(0)	526469
579	13.8	4.4	0.0	chr10	102185574	102185660	(31611762)	+	LOR1-int	LTR/ERV1	2	92	(8028)	526469
26	0.0	6.2	0.0	chr10	102185663	102185694	(31611728)	+	(ATTTT)n	Simple_repeat	1	34	(0)	526470
574	13.8	0.0	0.0	chr10	102185697	102185776	(31611646)	C	AluSx3	SINE/Alu	(27)	284	205	526471
2472	18.1	3.9	0.0	chr10	102191819	102192261	(31605161)	+	LOR1b	LTR/ERV1	1	461	(0)	526479
3224	17.9	8.5	2.9	chr10	102192281	102192960	(31604462)	+	L1M2b	LINE/L1	1	721	(6488)	526484
12	15.3	3.5	0.0	chr10	102642298	102642326	(31155096)	+	(CGCCC)n	Simple_repeat	1	30	(0)	527306
2434	17.2	5.6	0.9	chr10	106951864	106952302	(26845120)	+	LOR1b	LTR/ERV1	1	461	(0)	534533
6379	12.9	2.9	1.7	chr10	108544011	108545005	(25252417)	C	LTR13	LTR/ERVK	(0)	1007	1	536760
12	30.0	1.3	5.2	chr10	110227530	110227605	(23569817)	+	GA-rich	Low_complexity	1	77	(0)	539142
16	16.1	2.2	4.3	chr10	113126886	113126931	(20670491)	+	(GCGG)n	Simple_repeat	1	45	(0)	543814
236	28.9	0.0	11.0	chr10	113820381	113820489	(19976933)	C	L2a	LINE/L2	(342)	3077	2981	544938
2158	16.5	2.8	5.5	chr10	114557640	114558159	(19239263)	+	LOR1b	LTR/ERV1	1	496	(1)	546125
2266	16.1	5.4	5.4	chr10	118777076	118777373	(15020049)	C	LOR1b	LTR/ERV1	(0)	461	153	552578
16	8.7	0.0	0.0	chr10	119726064	119726088	(14071334)	+	(GCC)n	Simple_repeat	1	25	(0)	554474
12	16.4	0.0	10.0	chr10	121300836	121300885	(12496537)	+	G-rich	Low_complexity	1	50	(0)	556943
2008	20.9	3.3	1.1	chr10	121975794	121976244	(11821178)	C	LOR1b	LTR/ERV1	(0)	461	1	558057
1889	16.2	22.7	2.0	chr10	124300644	124301025	(9496397)	+	LOR1b	LTR/ERV1	1	461	(0)	561660
201	30.0	14.0	3.0	chr10	124301036	124301200	(9496222)	+	MIRc	SINE/MIR	46	231	(37)	561661
417	32.9	4.2	0.6	chr10	124301257	124301418	(9496004)	C	Charlie16a	DNA/hAT-Charlie	(31)	311	144	561662
634	28.3	16.6	1.3	chr10	125521812	125522194	(8275228)	C	L2a	LINE/L2	(0)	3426	2974	563635
246	16.3	9.5	13.1	chr10	125908817	125908915	(7888507)	+	MLT1E1A	LTR/ERVL-MaLR	586	680	(0)	564189
1485	24.1	11.6	0.2	chr10	125908917	125909328	(7888094)	C	MLT1F	LTR/ERVL-MaLR	(83)	465	1	564188
2158	21.1	18.9	2.7	chr10	126423735	126424373	(7373049)	+	LTR41	LTR/ERVL	1	767	(1)	564833
3995	24.4	8.8	4.9	chr10	132756429	132757609	(1039813)	+	Tigger3b	DNA/TcMar-Tigger	1	1231	(0)	571936
284	20.4	2.3	2.1	chr10	133520013	133520101	(277321)	+	L1ME3D	LINE/L1	5963	6055	(188)	572594
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
8573	4.9	0.2	0.4	chr11	361380	362388	(134724234)	C	LTR13	LTR/ERVK	(0)	1007	1	573327
2400	5.8	0.3	0.3	chr11	518188	518481	(134568141)	C	AluY	SINE/Alu	(17)	294	1	573498
936	9.4	3.0	0.0	chr11	518496	518622	(134568000)	C	AluSx3	SINE/Alu	(180)	131	1	573499
2277	26.8	9.6	3.1	chr11	1809525	1809624	(133276998)	+	L1ME1	LINE/L1	5277	5408	(771)	575118
3171	14.5	1.4	0.8	chr11	1809625	1810118	(133276504)	C	LOR1a	LTR/ERV1	(0)	497	1	575128
4621	13.3	6.7	5.7	chr11	10554077	10554860	(124531762)	+	MER21A	LTR/ERVL	135	931	(0)	587706
15	13.9	0.0	0.0	chr11	10809786	10809809	(124276813)	+	(T)n	Simple_repeat	1	24	(0)	588159
650	24.3	9.9	2.7	chr11	10865446	10865963	(124220659)	C	L1ME3G	LINE/L1	(305)	619	41	588277
40	13.2	2.6	0.0	chr11	10865969	10866042	(124220580)	+	(TCTT)n	Simple_repeat	1	76	(0)	588278
117	0.8	0.8	3.1	chr11	10866043	10866170	(124220452)	+	(TTTCC)n	Simple_repeat	1	129	(0)	588279
67	0.0	0.0	0.0	chr11	10866178	10866237	(124220385)	+	(CTTC)n	Simple_repeat	1	60	(0)	588280
1333	13.3	0.9	7.1	chr11	10866238	10866462	(124220160)	C	AluJo	SINE/Alu	(20)	292	82	588281
312	24.2	9.8	7.2	chr11	12009297	12009434	(123077188)	+	L1MEg	LINE/L1	556	697	(5712)	590069
3082	12.4	4.6	2.5	chr11	12026512	12026997	(123059625)	C	LOR1a	LTR/ERV1	(0)	497	1	590095
187	30.3	2.9	4.3	chr11	17896476	17896544	(117190078)	+	L3	LINE/CR1	3691	3758	(341)	599510
259	1.2	0.0	7.1	chr11	17896545	17896936	(117189686)	+	(GAAGG)n	Simple_repeat	1	392	(0)	599512
191	32.9	2.1	1.4	chr11	18013379	18013523	(117073099)	C	MIRc	SINE/MIR	(35)	233	88	599738
2252	10.0	0.0	2.1	chr11	22809503	22809793	(112276829)	C	AluSx1	SINE/Alu	(27)	285	1	607478
16	10.3	0.0	5.7	chr11	22809794	22809806	(112276816)	+	(TTA)n	Simple_repeat	1	12	(0)	607479
233	28.1	0.0	2.2	chr11	22809890	22809980	(112276642)	+	Charlie15b	DNA/hAT-Charlie	968	1056	(5)	607480
3315	12.4	1.2	0.2	chr11	22810013	22810504	(112276118)	C	LOR1a	LTR/ERV1	(0)	497	1	607481
2029	15.9	1.0	0.3	chr11	27250693	27251001	(107835621)	+	AluJb	SINE/Alu	1	311	(1)	613658
26	15.8	2.4	6.0	chr11	27251002	27251063	(107835559)	+	A-rich	Low_complexity	20	78	(0)	613659
2300	22.7	7.8	5.2	chr11	31910986	31911002	(103175620)	C	L1MC5	LINE/L1	(885)	8419	8405	620619
1507	20.1	2.5	2.1	chr11	31911003	31911285	(103175337)	+	AluJb	SINE/Alu	1	284	(28)	620621
152	0.0	0.0	0.0	chr11	31911286	31911417	(103175205)	+	(AAAGG)n	Simple_repeat	1	132	(0)	620622
2300	22.7	7.8	5.2	chr11	31911418	31912154	(103174468)	C	L1MC5	LINE/L1	(900)	8404	7643	620619
2133	10.6	6.3	3.5	chr11	31926887	31927256	(103159366)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	620649
204	31.7	1.9	1.9	chr11	31927265	31927367	(103159255)	+	MIRb	SINE/MIR	51	153	(115)	620650
622	26.2	3.8	1.5	chr11	31927438	31927642	(103158980)	+	MIRb	SINE/MIR	51	260	(8)	620651
12	22.7	0.0	0.0	chr11	31927656	31927687	(103158935)	+	(TTATTG)n	Simple_repeat	1	32	(0)	620652
2145	23.5	2.3	5.0	chr11	32630865	32631544	(102455078)	+	L1MEc	LINE/L1	2445	3105	(3214)	621972
230	7.1	0.0	0.0	chr11	32631545	32631572	(102455050)	+	AluJb	SINE/Alu	87	114	(188)	621978
71	6.1	7.4	0.0	chr11	32631573	32631693	(102454929)	+	(AGGAA)n	Simple_repeat	1	130	(0)	621979
725	15.7	9.4	2.9	chr11	32631703	32631840	(102454782)	+	AluJb	SINE/Alu	135	282	(30)	621978
19	22.6	0.0	0.0	chr11	32631850	32631896	(102454726)	+	(AGAC)n	Simple_repeat	1	47	(0)	621980
1446	23.7	2.6	9.9	chr11	32631928	32632218	(102454404)	C	L1M5	LINE/L1	(3211)	2935	2666	621981
27	3.5	0.0	0.0	chr11	33869482	33869511	(101217111)	+	(CGC)n	Simple_repeat	1	30	(0)	624189
18	26.0	3.7	2.4	chr11	33869617	33869697	(101216925)	+	(CCGCGG)n	Simple_repeat	1	84	(0)	624190
15	8.9	0.0	0.0	chr11	33869675	33869698	(101216924)	+	(GCT)n	Simple_repeat	1	24	(0)	624191
16	17.5	5.5	3.5	chr11	33869724	33869778	(101216844)	+	(CCG)n	Simple_repeat	1	58	(0)	624192
18	3.7	0.0	6.2	chr11	35662600	35662631	(99423991)	+	(TCC)n	Simple_repeat	1	32	(0)	627134
12	35.1	1.4	1.4	chr11	35663487	35663556	(99423066)	+	GA-rich	Low_complexity	1	71	(0)	627135
1908	19.9	6.1	4.6	chr11	35963184	35963637	(99122985)	+	LOR1b	LTR/ERV1	1	461	(0)	627637
15	18.0	4.3	2.1	chr11	46120708	46120753	(88965869)	+	(TCCC)n	Simple_repeat	1	48	(0)	643309
28	24.9	5.9	0.9	chr11	46120810	46120911	(88965711)	+	GA-rich	Low_complexity	1	108	(0)	643310
19	10.4	0.0	0.0	chr11	46120986	46121016	(88965606)	+	(GAG)n	Simple_repeat	1	31	(0)	643311
21	8.9	2.8	0.0	chr11	46121048	46121083	(88965539)	+	(GCT)n	Simple_repeat	1	37	(0)	643312
13	5.0	0.0	4.3	chr11	46121133	46121155	(88965467)	+	(CCT)n	Simple_repeat	1	23	(0)	643313
37	4.3	4.2	0.0	chr11	46121156	46121203	(88965419)	+	(CT)n	Simple_repeat	1	50	(0)	643314
16	21.7	0.0	0.0	chr11	46121236	46121267	(88965355)	+	G-rich	Low_complexity	1	32	(0)	643315
13	8.9	0.0	3.9	chr11	46121400	46121425	(88965197)	+	(CAG)n	Simple_repeat	1	26	(0)	643316
21	25.1	4.2	3.0	chr11	46121485	46121519	(88965103)	+	(CGCCCG)n	Simple_repeat	1	94	(0)	643317
26	7.9	7.3	1.7	chr11	46121520	46121574	(88965048)	+	(CCG)n	Simple_repeat	1	59	(0)	643318
2591	7.7	0.0	0.0	chr11	46964275	46964584	(88122038)	C	AluY	SINE/Alu	(1)	310	1	645000
221	38.7	0.0	8.8	chr11	46964585	46964640	(88121982)	+	L2c	LINE/L2	3016	3069	(318)	644999
448	15.9	5.4	0.0	chr11	46964647	46964734	(88121888)	C	Charlie1	DNA/hAT-Charlie	(6)	2775	2683	645001
1703	15.0	0.0	0.3	chr11	46964737	46965024	(88121598)	C	LOR1a	LTR/ERV1	(0)	497	211	645002
625	9.2	0.0	0.0	chr11	46965029	46965115	(88121507)	C	LOR1a	LTR/ERV1	(374)	87	1	645002
12	14.4	0.0	0.0	chr11	47642477	47642500	(87444122)	+	(CGGA)n	Simple_repeat	1	24	(0)	646353
17	20.9	2.7	6.5	chr11	47642561	47642635	(87443987)	+	(GCCC)n	Simple_repeat	1	77	(0)	646354
2055	18.4	9.1	0.2	chr11	48153032	48153252	(86933370)	C	LOR1b	LTR/ERV1	(0)	461	242	647667
2152	4.8	13.2	0.0	chr11	48153253	48153522	(86933100)	+	AluY	SINE/Alu	1	311	(0)	647668
6567	11.6	2.4	2.2	chr11	60618205	60619209	(74467413)	C	LTR13	LTR/ERVK	(0)	1007	1	658591
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
105	1.9	1.9	0.0	chr11	67583298	67583405	(67503217)	+	(ATAAA)n	Simple_repeat	1	110	(0)	671936
5815	12.9	2.5	2.3	chr11	67658910	67659904	(67426718)	C	LTR13	LTR/ERVK	(0)	1007	11	672054
706	21.4	1.1	4.6	chr11	68029157	68029352	(67057270)	+	LOR1a	LTR/ERV1	309	497	(0)	672647
4013	20.7	3.0	2.5	chr11	73029247	73030074	(62056548)	+	L1M4c	LINE/L1	6	837	(5547)	681043
346	35.4	9.5	4.8	chr11	85628901	85629232	(49457390)	+	L2c	LINE/L2	3020	3368	(19)	704115
15	7.5	11.4	2.0	chr11	86069146	86069189	(49017433)	+	(CCCTTCT)n	Simple_repeat	1	49	(0)	704858
12	24.0	4.6	4.4	chr11	86069190	86069210	(49017412)	+	(CCCT)n	Simple_repeat	1	68	(0)	704859
22	18.7	1.5	4.5	chr11	86069367	86069432	(49017190)	+	G-rich	Low_complexity	1	67	(0)	704860
22253	4.4	0.8	0.0	chr11	86834123	86834506	(48252116)	C	HERV17-int	LTR/ERV1	(2607)	6019	5635	706177
113	0.0	0.0	1.9	chr11	86834507	86834614	(48252008)	+	(TTTCC)n	Simple_repeat	1	108	(0)	706178
22253	4.4	0.8	0.0	chr11	86834615	86836818	(48249804)	C	HERV17-int	LTR/ERV1	(2992)	5634	3412	706177
356	18.3	8.3	2.3	chr11	87188911	87189047	(47897575)	C	L1ME3G	LINE/L1	(355)	569	467	706767
60	11.7	3.3	2.4	chr11	87189053	87189172	(47897450)	+	(TTCCTT)n	Simple_repeat	1	124	(0)	706768
2165	11.4	0.0	0.0	chr11	87189188	87189460	(47897162)	C	AluSx	SINE/Alu	(39)	273	1	706769
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
477	24.5	7.2	10.9	chr11	97861883	97862129	(37224493)	+	L1MDa	LINE/L1	198	434	(6199)	721734
1129	11.9	0.0	0.0	chr11	97862141	97862299	(37224323)	C	LOR1a	LTR/ERV1	(0)	497	339	721735
3580	21.3	8.9	2.1	chr11	97862300	97863330	(37223292)	+	L1MDa	LINE/L1	1512	2618	(4015)	721734
2017	19.8	1.1	8.6	chr11	98484411	98484885	(36601737)	C	MLT2B1	LTR/ERVL	(1)	519	81	722583
865	14.8	6.3	0.7	chr11	98484896	98485045	(36601577)	C	LOR1b	LTR/ERV1	(10)	487	329	722584
1183	10.4	1.7	0.6	chr11	98485041	98485214	(36601408)	C	LOR1b	LTR/ERV1	(285)	176	1	722584
2300	19.6	2.4	0.0	chr11	98769105	98769549	(36317073)	C	LOR1b	LTR/ERV1	(0)	461	6	722934
14	20.9	4.3	2.0	chr11	102110476	102110522	(32976100)	+	GA-rich	Low_complexity	1	49	(0)	727405
18	21.2	4.8	1.5	chr11	102110645	102110706	(32975916)	+	(GGAGGC)n	Simple_repeat	1	65	(0)	727406
48	0.0	0.0	0.0	chr11	112113515	112113555	(22973067)	+	(AG)n	Simple_repeat	1	41	(0)	742561
13	12.5	0.0	3.5	chr11	112113720	112113748	(22972874)	+	(TTTC)n	Simple_repeat	1	29	(0)	742562
21	11.2	0.0	0.0	chr11	112113805	112113834	(22972788)	+	(A)n	Simple_repeat	1	30	(0)	742563
399	34.5	3.2	3.7	chr11	112113914	112114130	(22972492)	+	L1M6	LINE/L1	537	752	(5744)	742564
4559	18.2	1.5	1.7	chr11	113925849	113926448	(21160174)	C	L1MB7	LINE/L1	(0)	6184	5583	745409
95	1.1	0.0	0.0	chr11	113926449	113926536	(21160086)	+	(TTTCC)n	Simple_repeat	1	88	(0)	745410
2133	11.6	0.3	0.3	chr11	113926537	113926828	(21159794)	C	AluSx	SINE/Alu	(20)	292	1	745411
369	36.4	0.0	1.7	chr11	114797503	114797681	(20288941)	C	MER117	DNA/hAT-Charlie	(19)	178	3	746734
23	5.4	4.9	2.3	chr11	120211311	120211351	(14875271)	+	(CTG)n	Simple_repeat	1	43	(0)	756150
13	22.3	4.1	2.0	chr11	120211399	120211447	(14875175)	+	(CGGACAG)n	Simple_repeat	1	51	(0)	756151
2429	17.6	3.5	0.5	chr11	120725337	120725782	(14360840)	C	LOR1b	LTR/ERV1	(0)	461	2	757057
464	32.4	12.6	4.3	chr11	121946491	121946585	(13140037)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	357	758850
2363	14.8	7.4	0.9	chr11	121946586	121947016	(13139606)	C	LOR1b	LTR/ERV1	(0)	461	1	758851
2239	17.0	7.8	1.2	chr11	127491539	127491966	(7594656)	C	LOR1b	LTR/ERV1	(2)	459	1	767639
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
21	16.4	0.0	0.0	chr12	389549	389590	(132885719)	+	(CGAGG)n	Simple_repeat	1	42	(0)	778653
20	27.6	0.0	0.0	chr12	389591	389606	(132885703)	+	(CGGCG)n	Simple_repeat	4	61	(0)	778654
2132	11.3	2.3	0.0	chr12	953031	953331	(132321978)	+	AluSz	SINE/Alu	3	310	(2)	779766
508	25.2	9.7	0.0	chr12	953461	953591	(132321718)	+	L1M5	LINE/L1	5571	5715	(479)	779767
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
2454	15.3	6.3	1.1	chr12	3949417	3949853	(129325456)	+	LOR1b	LTR/ERV1	1	461	(0)	784664
16	0.0	0.0	0.0	chr12	4031587	4031603	(129243706)	+	(T)n	Simple_repeat	1	17	(0)	784815
213	27.7	3.5	2.4	chr12	4031914	4031969	(129243340)	+	MIR3	SINE/MIR	83	136	(72)	784816
467	22.5	8.2	5.4	chr12	4031970	4032129	(129243180)	+	MIR3	SINE/MIR	1	162	(46)	784817
14	5.0	0.0	0.0	chr12	6336230	6336250	(126939059)	+	(GGAG)n	Simple_repeat	1	21	(0)	788501
818	27.1	0.3	4.4	chr12	10341553	10341845	(122933464)	C	L1ME3	LINE/L1	(344)	6216	5936	795121
2820	13.0	0.9	0.9	chr12	10341871	10342329	(122932980)	+	LOR1a	LTR/ERV1	2	460	(37)	795123
378	19.6	8.7	7.7	chr12	10342357	10342550	(122932759)	C	L1ME3	LINE/L1	(654)	5906	5711	795121
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
17	26.9	3.9	2.5	chr12	20368450	20368526	(112906783)	+	(TCCT)n	Simple_repeat	1	80	(0)	809554
15	10.1	2.9	2.9	chr12	20368782	20368829	(112906480)	+	(GCGCA)n	Simple_repeat	1	48	(0)	809555
1900	14.6	0.7	5.1	chr12	26515830	26516144	(106759165)	+	AluJb	SINE/Alu	3	303	(9)	818083
28	4.6	2.0	4.0	chr12	26516160	26516208	(106759101)	+	(AGGGG)n	Simple_repeat	1	50	(0)	818084
161	2.0	0.0	0.0	chr12	26516214	26516366	(106758943)	+	(AAGGA)n	Simple_repeat	1	153	(0)	818085
2908	14.1	5.6	0.0	chr12	30423181	30423649	(102851660)	+	LOR1a	LTR/ERV1	1	497	(0)	823683
1136	23.0	18.6	1.8	chr12	30423650	30423668	(102851641)	+	L2a	LINE/L2	2915	2934	(485)	823682
2001	15.5	0.9	1.2	chr12	30423677	30424021	(102851288)	+	LOR1-int	LTR/ERV1	28	371	(7749)	823684
4595	12.2	6.8	1.6	chr12	30424034	30424856	(102850453)	+	LOR1-int	LTR/ERV1	203	1071	(7049)	823685
6356	11.7	2.3	2.2	chr12	30850965	30851917	(102423392)	+	LTR13_	LTR/ERVK	1	954	(0)	824284
3228	10.4	3.0	4.9	chr12	31887198	31887704	(101387605)	+	LOR1a	LTR/ERV1	1	497	(0)	826286
475	8.6	1.4	4.1	chr12	31887786	31887858	(101387451)	C	L1M3	LINE/L1	(428)	5752	5682	826287
13	18.9	0.0	0.0	chr12	42589114	42589143	(90686166)	+	(CCTCG)n	Simple_repeat	1	30	(0)	836900
2415	17.1	3.5	0.5	chr12	47553056	47553502	(85721807)	+	LOR1b	LTR/ERV1	1	461	(0)	843851
12	20.1	2.9	0.0	chr12	49070012	49070045	(84205264)	+	(GCCGC)n	Simple_repeat	1	35	(0)	846320
1046	6.5	0.0	0.0	chr12	55645987	55646109	(77629200)	C	AluYc	SINE/Alu	(16)	283	161	857987
414	5.7	0.0	0.0	chr12	55646110	55646162	(77629147)	C	L1PREC2	LINE/L1	(867)	5279	5227	857986
14	31.3	0.0	0.0	chr12	65169808	65169858	(68105451)	+	(CGG)n	Simple_repeat	1	51	(0)	872393
12	24.0	4.8	3.1	chr12	65170235	65170296	(68105013)	+	G-rich	Low_complexity	1	65	(0)	872394
11198	11.7	1.2	1.2	chr12	65483438	65484591	(67790718)	C	MSTA-int	LTR/ERVL-MaLR	(4)	1627	460	872853
19	19.8	0.0	6.7	chr12	69239578	69239637	(64035672)	+	(GCG)n	Simple_repeat	1	60	(0)	878960
1810	17.8	3.0	1.1	chr12	70463691	70464054	(62811255)	C	LOR1-int	LTR/ERV1	(7749)	371	1	880933
2486	15.8	4.1	0.0	chr12	70464055	70464496	(62810813)	C	LOR1b	LTR/ERV1	(0)	461	1	880933
20	18.0	0.0	6.7	chr12	77755437	77755496	(55519813)	+	(TTCTT)n	Simple_repeat	1	60	(0)	891244
75	24.4	2.8	1.4	chr12	77755497	77755511	(55519798)	+	(CTTC)n	Simple_repeat	2	78	(0)	891245
82	0.0	0.0	0.0	chr12	77755512	77755584	(55519725)	+	(CCTTT)n	Simple_repeat	1	73	(0)	891246
75	24.4	2.8	1.4	chr12	77755585	77755722	(55519587)	+	(CTTC)n	Simple_repeat	3	141	(0)	891247
871	20.3	0.0	0.0	chr12	77755726	77755873	(55519436)	C	AluJb	SINE/Alu	(4)	308	161	891248
22	3.9	0.0	0.0	chr12	77979700	77979726	(55295583)	+	(A)n	Simple_repeat	1	27	(0)	891562
3236	12.4	2.4	0.2	chr12	77979814	77980297	(55295012)	C	LOR1a	LTR/ERV1	(0)	497	3	891563
2966	14.8	2.2	0.6	chr12	83010201	83010689	(50264620)	+	LOR1a	LTR/ERV1	1	497	(0)	898565
22	20.7	5.5	0.0	chr12	83010690	83010727	(50264582)	+	(ATATCT)n	Simple_repeat	6	46	(0)	898566
2359	10.6	0.0	0.3	chr12	83614750	83615052	(49660257)	+	AluSc	SINE/Alu	1	302	(7)	899288
2058	18.6	4.6	3.7	chr12	83615053	83615447	(49659862)	+	LOR1b	LTR/ERV1	73	461	(0)	899287
1622	27.6	21.4	1.2	chr12	83615448	83616354	(49658955)	C	L1MC4	LINE/L1	(217)	7825	6700	899286
27	23.0	1.4	1.4	chr12	89709271	89709343	(43565966)	+	(CGC)n	Simple_repeat	1	74	(0)	907475
18	12.0	0.0	0.0	chr12	89709389	89709415	(43565894)	+	(GC)n	Simple_repeat	1	27	(0)	907476
11	13.2	5.7	2.7	chr12	89709428	89709462	(43565847)	+	G-rich	Low_complexity	1	37	(0)	907477
2616	16.5	1.3	0.2	chr12	102106766	102107221	(31168088)	+	LOR1b	LTR/ERV1	1	461	(0)	928566
1505	26.0	7.6	2.1	chr12	102107543	102108033	(31167276)	+	L1ME3B	LINE/L1	5661	6190	(52)	928567
1282	16.8	7.8	0.8	chr12	107097988	107098225	(26177084)	+	AluJb	SINE/Alu	54	309	(3)	937402
88	22.2	4.4	2.8	chr12	107098226	107098500	(26176809)	+	A-rich	Low_complexity	1	287	(0)	937403
183	25.0	5.5	0.0	chr12	107098502	107098553	(26176756)	+	MIRc	SINE/MIR	214	268	(0)	937404
2409	11.5	1.0	1.5	chr12	108502857	108502997	(24772312)	+	L1MB3	LINE/L1	5796	5936	(247)	940437
3310	11.9	3.8	0.2	chr12	108502998	108503476	(24771833)	C	LOR1a	LTR/ERV1	(0)	497	1	940438
1967	16.2	15.8	0.8	chr12	110111571	110111961	(23163348)	+	LOR1b	LTR/ERV1	1	461	(0)	944062
1498	17.6	4.9	2.0	chr12	110111962	110112145	(23163164)	C	AluJb	SINE/Alu	(119)	193	1	944061
921	22.8	7.7	10.8	chr12	110112148	110112561	(23162748)	+	MLT1H2	LTR/ERVL-MaLR	68	480	(9)	944063
2722	13.6	1.9	0.0	chr12	112993984	112994394	(20280915)	+	LOR1b	LTR/ERV1	43	461	(0)	950544
2196	12.8	0.0	0.0	chr12	112994415	112994720	(20280589)	C	AluSx1	SINE/Alu	(5)	307	2	950545
402	29.3	3.1	7.1	chr12	114656688	114656856	(18618453)	C	MIR	SINE/MIR	(81)	181	20	954226
522	30.7	10.8	1.6	chr12	116455226	116455543	(16819766)	+	L2a	LINE/L2	3075	3425	(1)	958097
2401	10.3	0.0	0.0	chr12	116477960	116478271	(16797038)	C	AluSq	SINE/Alu	(0)	313	2	958159
863	32.3	7.6	6.5	chr12	116478272	116478332	(16796977)	+	L1ME3G	LINE/L1	675	735	(189)	958156
3551	9.5	3.0	0.0	chr12	116478333	116478814	(16796495)	C	LOR1a	LTR/ERV1	(0)	497	1	958160
1098	13.3	21.6	2.0	chr12	120430351	120430456	(12844853)	+	AluJb	SINE/Alu	144	310	(2)	967053
236	17.7	9.0	4.1	chr12	120430689	120430762	(12844547)	C	L2a	LINE/L2	(15)	3372	3277	967056
2239	7.5	1.7	0.7	chr12	120430807	120431100	(12844209)	C	AluSc8	SINE/Alu	(14)	297	1	967057
270	22.5	48.2	0.0	chr12	121717317	121717448	(11557861)	C	L2	LINE/L2	(508)	2911	2716	970158
527	24.1	14.7	0.0	chr12	121717446	121717590	(11557719)	C	MIR	SINE/MIR	(86)	176	7	970159
3072	14.5	0.0	4.8	chr12	125847264	125847785	(7427524)	+	LOR1a	LTR/ERV1	1	497	(0)	978863
1205	22.2	3.0	2.4	chr12	125847786	125847942	(7427367)	C	L1MD2	LINE/L1	(2231)	5764	5608	978862
269	21.5	1.5	0.0	chr12	127125526	127125590	(6149719)	C	LTR52	LTR/ERVL	(355)	66	1	980965
3150	13.6	2.6	0.2	chr12	130540381	130540865	(2734444)	+	LOR1a	LTR/ERV1	1	497	(0)	986819
342	34.3	8.8	4.0	chr12	130540866	130540982	(2734327)	C	L2a	LINE/L2	(768)	2651	2506	986818
4128	9.5	3.3	5.0	chr12	131241967	131242610	(2032699)	C	LTR10E	LTR/ERV1	(0)	633	1	987901
911	17.5	0.0	6.2	chr12	132956529	132956705	(318604)	C	AluJo	SINE/Alu	(10)	302	137	990230
6716	10.2	0.9	2.0	chr12	132963830	132964793	(310516)	+	LTR13_	LTR/ERVK	1	954	(0)	990255
7733	7.1	1.9	0.5	chr12	132976767	132977759	(297550)	+	LTR13	LTR/ERVK	1	1007	(0)	990284
2414	15.5	6.3	0.0	chr13	23213982	23214413	(91149915)	+	LOR1b	LTR/ERV1	1	461	(0)	998530
2326	14.2	9.4	1.2	chr13	27468755	27469112	(86895216)	C	LOR1b	LTR/ERV1	(2)	459	74	1004998
2428	14.0	10.4	1.4	chr13	33232637	33233055	(81131273)	+	LOR1b	LTR/ERV1	1	461	(0)	1014000
6254	13.5	8.8	0.1	chr13	33233075	33234005	(81130323)	+	LTR28	LTR/ERV1	1	1020	(0)	1014001
1455	15.1	7.2	1.0	chr13	33688663	33688964	(80675364)	+	LOR1b	LTR/ERV1	60	381	(80)	1014662
2458	15.3	3.7	2.0	chr13	47956918	47957370	(66406958)	+	LOR1b	LTR/ERV1	1	461	(0)	1036014
2014	18.5	2.4	0.3	chr13	47957371	47957739	(66406589)	+	LOR1-int	LTR/ERV1	1	377	(7743)	1036014
116	4.3	2.7	0.7	chr13	49045019	49045164	(65319164)	+	(TTTCCC)n	Simple_repeat	1	150	(0)	1037753
2035	14.2	1.0	0.0	chr13	49045165	49045452	(65318876)	C	AluSz	SINE/Alu	(21)	291	1	1037754
2196	15.6	3.1	6.3	chr13	49874399	49874710	(64489618)	+	LOR1b	LTR/ERV1	153	461	(0)	1039239
2252	12.9	4.0	0.8	chr13	49874711	49875069	(64489259)	+	LOR1-int	LTR/ERV1	1	371	(7749)	1039239
1860	18.7	10.6	1.0	chr13	53457671	53458086	(60906242)	C	LOR1b	LTR/ERV1	(0)	461	1	1044675
1991	19.7	6.3	0.9	chr13	54996107	54996542	(59367786)	+	LOR1b	LTR/ERV1	1	461	(0)	1046601
21	11.7	0.0	0.0	chr13	54996611	54996647	(59367681)	+	(TGTTCTG)n	Simple_repeat	1	37	(0)	1046602
363	32.9	7.2	0.8	chr13	58429677	58429924	(55934404)	+	L1ME4b	LINE/L1	268	532	(360)	1050732
2520	14.8	7.8	0.9	chr13	58430001	58430462	(55933866)	C	LOR1a	LTR/ERV1	(0)	497	1	1050733
2359	15.6	6.3	1.8	chr13	58709721	58710157	(55654171)	+	LOR1b	LTR/ERV1	1	458	(3)	1051104
37	7.0	0.0	0.0	chr13	58710158	58710202	(55654126)	+	(AC)n	Simple_repeat	1	45	(0)	1051105
200	32.8	1.5	10.1	chr13	59531598	59531746	(54832582)	C	L2b	LINE/L2	(222)	3153	3018	1052235
377	32.1	7.3	2.6	chr13	59532106	59532418	(54831910)	+	L4_C_Mam	LINE/RTE-X	4639	4967	(171)	1052240
5655	12.9	3.1	4.2	chr13	60487645	60488023	(53876305)	C	L1MA5	LINE/L1	(515)	5785	5408	1053586
2460	15.2	5.9	1.4	chr13	60488024	60488463	(53875865)	C	LOR1b	LTR/ERV1	(0)	461	1	1053589
253	41.4	4.9	6.2	chr13	60600891	60600939	(53763389)	+	L2b	LINE/L2	2945	2994	(381)	1053744
1827	17.5	6.5	7.3	chr13	60600940	60601023	(53763305)	+	Tigger2a	DNA/TcMar-Tigger	2	68	(366)	1053750
138	2.0	2.5	1.2	chr13	60601024	60601180	(53763148)	+	(CCTGCCTCT)n	Simple_repeat	1	161	(0)	1053751
1827	17.5	6.5	7.3	chr13	60601181	60601434	(53762894)	+	Tigger2a	DNA/TcMar-Tigger	69	342	(92)	1053750
6961	17.9	8.6	7.7	chr13	61765292	61767029	(52597299)	C	MER52A	LTR/ERV1	(0)	1755	1	1055165
2113	17.5	11.7	0.7	chr13	62205065	62205506	(52158822)	C	LOR1a	LTR/ERV1	(0)	497	1	1055698
9346	16.1	3.5	0.8	chr13	63009431	63011011	(51353317)	C	MSTA-int	LTR/ERVL-MaLR	(6)	1625	1	1056706
10825	9.2	1.6	0.4	chr13	63305560	63307116	(51057212)	+	LTR12C	LTR/ERV1	3	1579	(0)	1057084
878	23.1	13.2	2.8	chr13	63527073	63527419	(50836909)	C	BLACKJACK	DNA/hAT-Blackjack	(22)	2947	2536	1057399
1436	18.8	12.1	9.0	chr13	63527420	63527864	(50836464)	C	LOR1b	LTR/ERV1	(0)	461	1	1057400
1627	18.8	5.2	0.6	chr13	63662397	63662744	(50701584)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1057571
2972	22.1	3.4	8.1	chr13	64078060	64079025	(50285303)	C	MER52A	LTR/ERV1	(752)	1003	1	1058103
2768	17.7	14.2	7.5	chr13	64879796	64880504	(49483824)	C	LTR1	LTR/ERV1	(18)	765	1	1059088
5457	18.6	18.5	5.5	chr13	65084917	65086312	(49278016)	C	MER52A	LTR/ERV1	(2)	2121	503	1059319
265	21.1	0.0	1.7	chr13	65149612	65149669	(49214659)	+	MLT1B	LTR/ERVL-MaLR	1	57	(333)	1059402
2128	11.5	7.7	0.2	chr13	65149669	65150113	(49214215)	C	LTR12C	LTR/ERV1	(1096)	483	3	1059403
2325	17.3	6.1	0.9	chr13	65991833	65992269	(48372059)	+	LOR1b	LTR/ERV1	1	461	(0)	1060492
2094	18.6	2.1	2.6	chr13	65992361	65992984	(48371344)	C	LTR8	LTR/ERV1	(0)	820	117	1060493
7324	13.3	2.5	0.4	chr13	66684990	66686106	(47678222)	+	THE1C-int	LTR/ERVL-MaLR	491	1631	(0)	1061331
23	25.0	1.8	0.0	chr13	67230277	67230331	(47133997)	+	(CT)n	Simple_repeat	1	56	(0)	1062005
1378	20.7	3.3	7.7	chr13	67371151	67371317	(46993011)	C	MER67C	LTR/ERV1	(309)	402	260	1062192
2696	4.2	0.3	1.3	chr13	67371318	67371629	(46992699)	C	AluYm1	SINE/Alu	(2)	309	1	1062193
2985	20.8	17.8	5.7	chr13	67769449	67770383	(46593945)	C	LTR27E	LTR/ERV1	(4)	1073	1	1062699
7865	7.0	19.8	0.2	chr13	68170797	68172063	(46192265)	+	LTR12C	LTR/ERV1	3	1579	(0)	1063192
324	27.9	4.3	3.2	chr13	68256613	68256797	(46107531)	+	L1MEc	LINE/L1	3262	3448	(2871)	1063309
1124	19.0	15.2	1.4	chr13	68256804	68257096	(46107232)	+	MER61A	LTR/ERV1	1	341	(0)	1063312
1914	21.0	24.3	1.7	chr13	68257097	68257726	(46106602)	+	MER61-int	LTR/ERV1	1	777	(4440)	1063312
347	25.8	10.8	6.1	chr13	68930329	68930361	(45433967)	C	MER5A	DNA/hAT-Charlie	(0)	189	161	1064149
2188	17.8	4.8	0.5	chr13	68930362	68930801	(45433527)	C	LOR1b	LTR/ERV1	(0)	461	2	1064150
2301	18.5	2.4	1.1	chr13	69489999	69490451	(44873877)	+	LOR1b	LTR/ERV1	3	461	(0)	1064829
61	17.6	4.6	4.9	chr13	69779330	69779524	(44584804)	+	(TTCCT)n	Simple_repeat	1	204	(0)	1065241
2299	16.8	5.8	1.6	chr13	70256784	70257224	(44107104)	+	LOR1b	LTR/ERV1	1	461	(0)	1065904
211	30.1	11.5	3.1	chr13	70981043	70981169	(43383159)	C	L2c	LINE/L2	(209)	3178	3040	1066862
871	17.5	0.0	0.0	chr13	70981170	70981295	(43383033)	C	AluJo	SINE/Alu	(56)	256	131	1066863
24	12.0	0.0	4.1	chr13	70981300	70981348	(43382980)	+	(TCCC)n	Simple_repeat	1	49	(0)	1066864
76	8.9	7.3	1.2	chr13	70981346	70981496	(43382832)	+	(TCCTT)n	Simple_repeat	1	162	(0)	1066865
473	23.3	8.4	0.0	chr13	70981499	70981618	(43382710)	C	FLAM_C	SINE/Alu	(12)	131	1	1066866
13	26.4	0.0	3.8	chr13	71867035	71867087	(42497241)	+	G-rich	Low_complexity	1	53	(0)	1068021
18	14.6	2.6	0.0	chr13	72727555	72727592	(41636736)	+	(CGC)n	Simple_repeat	1	39	(0)	1069242
1026	33.5	12.1	3.8	chr13	73490448	73491014	(40873314)	C	L2a	LINE/L2	(1035)	2384	1792	1070628
1193	15.6	28.7	0.7	chr13	73491030	73491341	(40872987)	C	LOR1a	LTR/ERV1	(0)	497	97	1070633
447	32.0	10.0	3.2	chr13	73491353	73491604	(40872724)	C	L2a	LINE/L2	(2680)	739	469	1070628
1591	18.0	2.2	2.5	chr13	73956641	73956918	(40407410)	+	AluJo	SINE/Alu	3	279	(33)	1071304
147	5.7	4.4	0.8	chr13	73956919	73957143	(40407185)	+	(GAAAG)n	Simple_repeat	1	235	(0)	1071305
15	26.4	2.0	0.0	chr13	74907543	74907605	(39456723)	+	A-rich	Low_complexity	1	64	(0)	1072573
188	35.5	5.5	4.0	chr13	74907866	74907991	(39456337)	+	L2b	LINE/L2	3067	3194	(181)	1072574
19	13.9	3.9	3.8	chr13	75482400	75482450	(38881878)	+	(TCCT)n	Simple_repeat	1	53	(0)	1073409
1750	10.2	0.0	0.0	chr13	76095648	76095873	(38268455)	C	AluSx1	SINE/Alu	(0)	312	87	1074294
77	18.9	4.8	3.3	chr13	76095874	76096103	(38268225)	+	(TTCCT)n	Simple_repeat	1	241	(0)	1074295
2132	12.2	0.4	0.0	chr13	77285505	77285783	(37078545)	+	AluSp	SINE/Alu	1	280	(33)	1075959
81	4.8	3.5	4.7	chr13	77285784	77285927	(37078401)	+	(GAAAG)n	Simple_repeat	1	149	(0)	1075960
190	25.5	1.9	0.0	chr13	77286066	77286116	(37078212)	C	L2	LINE/L2	(1905)	1514	1463	1075961
2394	21.9	5.0	5.6	chr13	78367916	78368523	(35995805)	+	MER77	LTR/ERVL	1	604	(0)	1077417
28	0.0	0.0	0.0	chr13	78588991	78589017	(35775311)	+	(T)n	Simple_repeat	1	27	(0)	1077750
203	28.8	2.7	1.4	chr13	79283525	79283598	(35080730)	C	MIRb	SINE/MIR	(1)	267	193	1078709
1592	21.8	0.0	2.0	chr13	79283616	79283908	(35080420)	+	AluJb	SINE/Alu	1	287	(25)	1078710
52	8.5	0.0	6.9	chr13	79283909	79284010	(35080318)	+	A-rich	Low_complexity	1	102	(0)	1078711
10699	18.9	3.8	1.4	chr13	79813504	79815141	(34549187)	C	L1MB8	LINE/L1	(355)	5823	4149	1079455
85	0.0	0.7	9.8	chr13	79815142	79815283	(34549045)	+	(CCTTT)n	Simple_repeat	1	143	(0)	1079457
10699	18.7	4.2	0.9	chr13	79815284	79816625	(34547703)	C	L1MB8	LINE/L1	(1998)	4148	2752	1079455
8889	21.3	5.0	2.7	chr13	79970627	79974921	(34389407)	C	L1PA17	LINE/L1	(2337)	4578	343	1079622
1775	17.4	0.0	3.0	chr13	83741601	83741898	(30622430)	+	AluJb	SINE/Alu	1	289	(23)	1084351
8756	21.4	7.2	2.6	chr13	83779136	83782519	(30581809)	+	L1PA17	LINE/L1	343	3740	(3175)	1084396
2209	15.4	2.1	0.6	chr13	84944491	84944855	(29419473)	C	LOR1-int	LTR/ERV1	(7749)	371	1	1085894
2978	12.0	5.8	0.8	chr13	84944857	84945327	(29419001)	C	LOR1a	LTR/ERV1	(0)	497	2	1085894
2539	14.3	7.7	0.2	chr13	84948665	84949112	(29415216)	+	LOR1a	LTR/ERV1	1	484	(13)	1085901
839	25.8	2.9	8.6	chr13	84972515	84972829	(29391499)	C	L1MCb	LINE/L1	(5330)	1798	1416	1085932
2028	20.0	3.5	2.2	chr13	84972830	84973284	(29391044)	C	LOR1b	LTR/ERV1	(0)	461	1	1085933
10539	13.6	1.1	0.1	chr13	85287919	85289533	(29074795)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	1086333
2310	18.2	2.4	0.2	chr13	85515649	85516099	(28848229)	+	LOR1b	LTR/ERV1	1	461	(0)	1086649
2568	20.1	0.8	1.0	chr13	85909825	85910322	(28454006)	C	LOR1a	LTR/ERV1	(0)	497	1	1087140
1234	32.8	12.3	4.1	chr13	86032275	86032514	(28331814)	+	L2a	LINE/L2	2318	2595	(824)	1087271
1625	23.4	5.2	4.2	chr13	86032515	86033014	(28331314)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	1087273
1734	20.7	1.0	10.9	chr13	86162347	86162785	(28201543)	C	LOR1b	LTR/ERV1	(0)	461	67	1087424
4635	12.9	1.8	4.3	chr13	86924143	86924946	(27439382)	C	LTR1	LTR/ERV1	(0)	783	1	1088318
683	32.5	8.7	2.3	chr13	87124037	87124421	(27239907)	C	MamRTE1	LINE/RTE-BovB	(100)	3712	3301	1088601
2295	20.7	1.3	0.2	chr13	88487904	88488359	(25875969)	+	LOR1b	LTR/ERV1	1	461	(0)	1090388
10491	14.6	4.2	1.5	chr13	88488360	88490204	(25874124)	+	LOR1-int	LTR/ERV1	1	1897	(6223)	1090388
2450	18.9	1.3	0.0	chr13	88492946	88493400	(25870928)	+	LOR1b	LTR/ERV1	1	461	(0)	1090390
230	33.1	7.5	1.4	chr13	88493403	88493540	(25870788)	+	L2a	LINE/L2	2401	2547	(872)	1090392
2214	17.0	7.6	0.4	chr13	89466722	89467182	(24897146)	C	LOR1a	LTR/ERV1	(0)	497	1	1091646
2205	17.8	3.4	0.0	chr13	89905881	89906279	(24458049)	+	LOR1b	LTR/ERV1	49	461	(0)	1092255
30105	13.1	3.6	3.6	chr13	89906280	89909086	(24455242)	+	LOR1-int	LTR/ERV1	1	2735	(5385)	1092255
6289	16.9	1.0	0.1	chr13	90047142	90048153	(24316175)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	611	1092440
9622	12.6	3.7	4.0	chr13	90546834	90548398	(23815930)	C	THE1B-int	LTR/ERVL-MaLR	(7)	1573	13	1093056
1882	10.5	7.8	4.4	chr13	91057371	91057665	(23306663)	+	AluSz6	SINE/Alu	1	306	(6)	1093710
109	5.6	0.6	2.5	chr13	91057667	91057824	(23306504)	+	(GGAAA)n	Simple_repeat	1	159	(0)	1093711
2002	21.4	2.5	2.0	chr13	91058014	91058453	(23305875)	C	MER57A-int	LTR/ERV1	(4079)	2108	1667	1093712
2229	17.6	6.3	1.4	chr13	91305387	91305824	(23058504)	+	LOR1b	LTR/ERV1	1	461	(0)	1094081
14	27.5	1.7	3.3	chr13	91348957	91349016	(23015312)	+	(CGC)n	Simple_repeat	1	61	(0)	1094137
11507	3.4	0.1	0.1	chr13	91974129	91976284	(22388044)	+	L1PA4	LINE/L1	4000	6155	(0)	1094980
2946	14.7	1.4	3.0	chr13	91976332	91976757	(22387571)	C	LOR1a	LTR/ERV1	(0)	497	77	1094981
279	33.6	4.5	6.1	chr13	92535028	92535255	(21829073)	C	MLT1O	LTR/ERVL-MaLR	(1)	541	318	1095694
1947	18.7	8.1	0.2	chr13	92535289	92535712	(21828616)	C	LOR1b	LTR/ERV1	(1)	460	1	1095695
95	0.0	0.0	0.0	chr13	95395258	95395341	(18968987)	+	(GAAAG)n	Simple_repeat	1	84	(0)	1100015
872	21.7	4.5	12.8	chr13	95395363	95395605	(18968723)	C	LTR29	LTR/ERV1	(422)	222	1	1100012
2302	18.0	14.5	6.0	chr13	100408674	100409319	(13955009)	C	MER61-int	LTR/ERV1	(4517)	700	1	1107911
1490	16.0	9.7	1.3	chr13	100409322	100409632	(13954696)	C	MER61A	LTR/ERV1	(1)	340	1	1107911
3578	9.0	3.6	0.0	chr13	109139515	109139994	(5224334)	C	LTR2C	LTR/ERV1	(0)	501	4	1119683
2603	11.5	4.2	0.0	chr13	111573907	111574314	(2790014)	C	LOR1a	LTR/ERV1	(0)	497	72	1122674
523	26.8	4.5	0.0	chr14	20495271	20495397	(86548321)	C	MER41D	LTR/ERV1	(383)	138	6	1128143
103	20.9	2.4	5.4	chr14	20495478	20495805	(86547913)	+	(TTCCT)n	Simple_repeat	1	336	(0)	1128147
559	23.2	0.0	10.4	chr14	20495811	20495993	(86547725)	C	L1MC5a	LINE/L1	(11)	2766	2603	1128148
31	17.8	0.0	0.0	chr14	23588825	23588881	(83454837)	+	(AC)n	Simple_repeat	1	57	(0)	1133066
1490	21.9	3.5	7.1	chr14	38849792	38850272	(68193446)	+	MLT1C	LTR/ERVL-MaLR	3	465	(2)	1154719
279	37.7	5.2	6.7	chr14	38850277	38850791	(68192927)	C	L2c	LINE/L2	(183)	3204	2704	1154720
34	29.1	1.4	3.5	chr14	39431953	39431960	(67611758)	+	(CGC)n	Simple_repeat	1	14	(130)	1155722
13	24.6	4.5	2.9	chr14	39431961	39432026	(67611692)	+	(CGCCTGC)n	Simple_repeat	1	69	(0)	1155723
34	29.1	1.4	3.5	chr14	39432027	39432094	(67611624)	+	(CGC)n	Simple_repeat	15	144	(0)	1155722
45	4.1	0.0	0.0	chr14	39432565	39432614	(67611104)	+	(GCGGG)n	Simple_repeat	1	50	(0)	1155724
2918	14.2	0.8	6.0	chr14	44374679	44375195	(62668523)	+	LOR1a	LTR/ERV1	8	497	(0)	1161691
2270	23.4	1.8	2.1	chr14	44375199	44375802	(62667916)	+	L1ME2z	LINE/L1	5397	5998	(446)	1161692
15	13.4	2.9	2.8	chr14	55051679	55051713	(51992005)	+	(GCT)n	Simple_repeat	1	36	(0)	1176946
398	19.3	7.3	4.2	chr14	55646242	55646360	(51397358)	+	L1ME3	LINE/L1	6040	6162	(0)	1178065
25	15.7	0.0	1.9	chr14	55646388	55646413	(51397305)	+	(TCTT)n	Simple_repeat	1	26	(0)	1178066
129	0.7	1.8	5.3	chr14	55646414	55646581	(51397137)	+	(TTTCC)n	Simple_repeat	1	171	(0)	1178067
25	15.7	0.0	1.9	chr14	55646582	55646608	(51397110)	+	(TCTT)n	Simple_repeat	3	28	(0)	1178068
16	23.9	5.6	2.6	chr14	64879827	64879898	(42163820)	+	(CGG)n	Simple_repeat	1	76	(0)	1192027
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
1576	14.5	3.3	0.0	chr14	81217571	81217805	(25825913)	+	AluJb	SINE/Alu	54	296	(16)	1220295
1915	17.3	8.5	6.8	chr14	91673079	91673531	(15370187)	+	LOR1b	LTR/ERV1	1	461	(0)	1236136
2317	9.6	0.3	0.0	chr14	91673604	91673895	(15369823)	+	AluSc	SINE/Alu	1	293	(16)	1236137
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
2384	6.6	0.0	0.0	chr14	102632219	102632504	(4411214)	C	AluYc3	SINE/Alu	(14)	286	1	1255371
112	0.0	0.0	3.5	chr14	102632612	102632727	(4410991)	+	(TCCTT)n	Simple_repeat	1	116	(0)	1255372
54	3.6	0.0	0.0	chr14	102632730	102632787	(4410931)	+	(CTCCC)n	Simple_repeat	1	58	(0)	1255373
13	8.1	3.9	0.0	chr14	102632788	102632813	(4410905)	+	(TCTCC)n	Simple_repeat	1	27	(0)	1255374
1813	16.9	1.7	0.7	chr14	102632814	102633109	(4410609)	C	AluJr	SINE/Alu	(13)	299	1	1255375
2737	3.8	0.0	1.0	chr14	103272795	103273108	(3770610)	+	AluY	SINE/Alu	1	311	(0)	1256471
41	14.4	2.3	2.2	chr14	103273109	103273213	(3770505)	+	(AAGGC)n	Simple_repeat	1	105	(0)	1256472
456	28.3	0.9	0.0	chr14	103921710	103921822	(3121896)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	1257798
1479	22.3	11.5	0.9	chr14	104341595	104341920	(2701798)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1258325
2736	7.7	0.8	0.0	chr14	105517599	105517950	(1525768)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1259785
1964	17.0	6.7	1.8	chr14	105517951	105518177	(1525541)	+	LOR1b	LTR/ERV1	238	460	(1)	1259784
664	20.4	7.0	2.3	chr14	105518194	105518421	(1525297)	C	MLT1C	LTR/ERVL-MaLR	(246)	259	1	1259783
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
3568	11.9	1.8	0.2	chr15	34185595	34186083	(67805106)	C	LOR1a	LTR/ERV1	(0)	497	1	1282419
2184	18.0	5.0	2.7	chr15	35191617	35192066	(66799123)	+	LOR1b	LTR/ERV1	1	461	(0)	1284086
1976	18.9	6.8	1.4	chr15	38915129	38915562	(63075627)	+	LOR1b	LTR/ERV1	3	461	(0)	1289012
3374	10.3	2.2	3.8	chr15	55394648	55395152	(46596037)	+	LOR1a	LTR/ERV1	1	497	(0)	1315454
63	28.1	2.5	3.6	chr15	62631423	62631518	(39359671)	+	(TTCC)n	Simple_repeat	1	95	(0)	1327200
60	1.6	1.6	0.0	chr15	62631519	62631580	(39359609)	+	(TTCCT)n	Simple_repeat	1	63	(0)	1327201
63	28.1	2.5	3.6	chr15	62631581	62631726	(39359463)	+	(TTCC)n	Simple_repeat	4	147	(0)	1327202
11	11.2	6.9	0.0	chr15	70099568	70099596	(31891593)	+	(TCCCCC)n	Simple_repeat	1	31	(0)	1341465
13	21.7	0.0	7.3	chr15	72272560	72272614	(29718575)	+	G-rich	Low_complexity	1	55	(0)	1345170
253	32.7	13.1	2.4	chr15	90365245	90365454	(11625735)	C	L2	LINE/L2	(402)	3017	2782	1376212
272	14.3	0.0	5.8	chr15	90365490	90365541	(11625648)	+	MIRb	SINE/MIR	193	241	(27)	1376203
12	21.7	0.0	4.9	chr15	90994724	90994764	(10996425)	+	(TGGCC)n	Simple_repeat	1	41	(0)	1377487
341	37.3	4.3	5.4	chr15	94802053	94802406	(7188783)	C	L1MEd	LINE/L1	(6468)	635	286	1383519
1920	18.1	11.5	0.5	chr15	94802567	94802976	(7188213)	C	LOR1b	LTR/ERV1	(0)	461	1	1383527
15	13.8	0.0	12.9	chr15	94845036	94845099	(7146090)	+	(GCC)n	Simple_repeat	1	55	(0)	1383603
3100	13.9	1.8	0.0	chr15	95362130	95362617	(6628572)	+	LOR1a	LTR/ERV1	1	497	(0)	1384333
2421	16.0	5.2	1.8	chr15	98318970	98319359	(3671830)	+	LOR1b	LTR/ERV1	69	461	(0)	1388439
2570	15.6	1.4	1.1	chr15	98319360	98319420	(3671769)	+	MER57F	LTR/ERV1	378	435	(0)	1388438
890	20.4	8.9	3.5	chr15	98319572	98319825	(3671364)	+	ORSL	DNA/hAT-Tip100	1	269	(6)	1388441
3408	10.9	3.8	0.0	chr15	98335470	98335947	(3655242)	+	LOR1a	LTR/ERV1	1	497	(0)	1388466
293	19.4	4.0	0.0	chr16	1025186	1025257	(89313088)	C	MER2	DNA/TcMar-Tigger	(3)	342	268	1395420
1702	18.8	7.8	0.8	chr16	1147098	1147488	(89190857)	C	MSTB	LTR/ERVL-MaLR	(0)	426	6	1395545
1415	25.6	4.6	0.9	chr16	1147489	1147687	(89190658)	C	L1MB7	LINE/L1	(148)	6036	5831	1395546
263	34.2	1.8	2.7	chr16	2128562	2128672	(88209673)	+	MIRb	SINE/MIR	122	231	(37)	1396912
1145	13.5	0.0	0.0	chr16	2128713	2128868	(88209477)	C	AluSx3	SINE/Alu	(20)	291	136	1396913
2229	9.4	0.3	0.0	chr16	2128870	2129156	(88209189)	C	AluSg	SINE/Alu	(18)	292	5	1396914
7918	6.9	0.8	2.6	chr16	2660262	2661287	(87677058)	C	LTR13	LTR/ERVK	(0)	1007	1	1397751
64	12.6	0.8	3.2	chr16	5500073	5500194	(84838151)	+	(CCTC)n	Simple_repeat	1	123	(0)	1403414
35	11.0	0.0	0.0	chr16	5500196	5500255	(84838090)	+	(CATTC)n	Simple_repeat	1	60	(0)	1403415
1598	17.6	0.8	0.4	chr16	5500260	5500521	(84837824)	C	AluJr	SINE/Alu	(49)	263	1	1403416
36	15.4	0.9	8.8	chr16	15147066	15147178	(75191167)	+	G-rich	Low_complexity	1	114	(0)	1423649
333	31.9	4.8	2.4	chr16	15147285	15147494	(75190851)	+	MIRb	SINE/MIR	16	231	(37)	1423650
1148	13.5	0.0	0.0	chr16	15147535	15147690	(75190655)	C	AluSx3	SINE/Alu	(20)	291	136	1423651
2345	8.3	0.7	0.7	chr16	18790551	18790839	(71547506)	C	AluSc	SINE/Alu	(14)	295	7	1431958
2226	16.3	4.1	10.9	chr16	19390158	19390565	(70947780)	+	LOR1b	LTR/ERV1	77	461	(0)	1433456
288	18.3	0.0	0.0	chr16	19390609	19390668	(70947677)	C	MIR	SINE/MIR	(57)	205	146	1433458
275	31.1	0.0	6.2	chr16	20742076	20742113	(69596232)	+	MLT1N2	LTR/ERVL-MaLR	438	475	(87)	1436389
3805	9.4	7.7	5.1	chr16	20742114	20742375	(69595970)	+	LTR66	LTR/ERVL	1	280	(330)	1436390
780	13.1	3.0	1.5	chr16	21300547	21300678	(69037667)	+	LTR57	LTR/ERVL	270	403	(8)	1437613
401	11.8	4.2	0.0	chr16	21300682	21300749	(69037596)	C	LTR41B	LTR/ERVL	(581)	177	107	1437614
613	28.3	5.6	0.9	chr16	27374587	27374807	(62963538)	+	MER113	DNA/hAT-Charlie	248	479	(42)	1451019
1144	27.7	6.6	6.9	chr16	27375088	27375598	(62962747)	+	MLT1K	LTR/ERVL-MaLR	23	519	(76)	1451020
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
15	26.5	0.0	4.9	chr16	35598947	35599007	(54739338)	+	(TTTTCT)n	Simple_repeat	1	61	(0)	1464970
260	21.7	9.9	6.9	chr16	47143451	47143941	(43194404)	+	LTR12C	LTR/ERV1	122	628	(951)	1466777
22	15.1	1.8	3.6	chr16	47143991	47144079	(43194266)	+	(CCCGC)n	Simple_repeat	1	87	(0)	1466778
1671	19.9	2.6	0.6	chr16	47492860	47493193	(42845152)	C	MER61A	LTR/ERV1	(0)	341	1	1467253
2009	8.3	0.0	12.9	chr16	50703358	50703707	(39634638)	+	AluSc8	SINE/Alu	1	305	(6)	1473021
10320	11.8	3.5	0.7	chr16	53185074	53186608	(37151737)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	1477431
4830	16.6	4.2	4.3	chr16	54554888	54555989	(35782356)	+	L1ME2z	LINE/L1	5232	6332	(112)	1479734
73	22.8	3.1	4.9	chr16	66790208	66790466	(23547879)	+	G-rich	Low_complexity	1	267	(0)	1500421
2665	15.0	4.5	0.2	chr16	67490579	67491019	(22847326)	+	LOR1b	LTR/ERV1	1	461	(0)	1501713
1276	11.7	0.0	0.0	chr16	67491105	67491267	(22847078)	C	AluSx	SINE/Alu	(16)	296	134	1501714
20	26.9	0.0	2.9	chr16	67562427	67562496	(22775849)	+	(CCCCT)n	Simple_repeat	1	70	(0)	1501890
12	28.1	1.9	1.9	chr16	67562503	67562555	(22775790)	+	(GCGCCG)n	Simple_repeat	1	54	(0)	1501891
15	17.8	2.6	0.0	chr16	67562793	67562830	(22775515)	+	(CGGCGC)n	Simple_repeat	1	39	(0)	1501892
13	14.0	4.7	4.4	chr16	69565635	69565677	(20772668)	+	(CTCTG)n	Simple_repeat	1	45	(0)	1506104
2351	16.4	7.2	0.0	chr16	71226620	71227047	(19111298)	+	LOR1b	LTR/ERV1	1	461	(0)	1509293
2184	24.6	4.5	5.5	chr16	71227048	71227112	(19111233)	+	L1ME1	LINE/L1	5196	5246	(900)	1509286
13	11.6	3.6	0.0	chr16	75517522	75517549	(14820796)	+	(CTGCT)n	Simple_repeat	1	29	(0)	1516962
2510	5.8	0.3	1.0	chr16	75517726	75518035	(14820310)	+	AluSz	SINE/Alu	1	308	(4)	1516963
2263	14.5	5.4	5.9	chr16	83734235	83734398	(6603947)	C	LOR1b	LTR/ERV1	(0)	461	290	1531508
1694	18.3	6.3	0.3	chr16	83734399	83734727	(6603618)	+	L1PA10	LINE/L1	5804	6153	(15)	1531509
6393	10.2	3.8	1.1	chr16	89640740	89641667	(696678)	C	LTR13_	LTR/ERVK	(0)	954	1	1541593
30	23.5	4.4	4.3	chr17	2337519	2337653	(80919788)	+	(GGCGGC)n	Simple_repeat	1	141	(0)	1548930
13	5.3	0.0	0.0	chr17	7885411	7885430	(75372011)	+	(GGA)n	Simple_repeat	1	20	(0)	1559703
16	13.5	0.0	8.3	chr17	7887728	7887775	(75369666)	+	(CTCCGCC)n	Simple_repeat	1	48	(0)	1559705
2115	12.4	0.0	0.0	chr17	8984108	8984389	(74273052)	+	AluSq2	SINE/Alu	1	282	(31)	1561831
93	0.0	0.0	2.2	chr17	8984392	8984482	(74272959)	+	(AAGGA)n	Simple_repeat	1	91	(0)	1561832
23	17.1	3.8	0.0	chr17	8984485	8984537	(74272904)	+	GA-rich	Low_complexity	1	55	(0)	1561833
446	22.8	14.4	4.1	chr17	8984538	8984853	(74272588)	+	L1M5	LINE/L1	4241	4594	(1552)	1561824
10666	11.6	4.1	3.7	chr17	13769351	13770923	(69486518)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1570323
2760	1.0	0.0	1.0	chr17	13976541	13976842	(69280599)	+	AluYd8	SINE/Alu	1	299	(0)	1570681
2279	11.1	1.3	1.9	chr17	20772878	20773192	(62484249)	C	AluSq2	SINE/Alu	(0)	313	1	1583060
1895	17.6	0.5	4.5	chr17	20773193	20773406	(62484035)	+	LOR1b	LTR/ERV1	255	461	(0)	1583057
221	24.6	5.0	0.0	chr17	20773417	20773473	(62483968)	+	MIR	SINE/MIR	199	258	(4)	1583056
2118	12.8	1.0	1.3	chr17	20773506	20773811	(62483630)	+	AluSx1	SINE/Alu	3	307	(5)	1583061
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
233	28.8	3.7	0.9	chr17	30240064	30240168	(53017273)	+	hAT-N1_Mam	DNA/hAT-Tip100?	173	280	(60)	1592205
3481	9.9	3.0	0.6	chr17	30240333	30240641	(53016800)	C	LTR2C	LTR/ERV1	(0)	501	192	1592206
869	26.1	12.3	1.6	chr17	31646446	31646604	(51610837)	+	L1MC4	LINE/L1	7413	7575	(467)	1595003
2020	17.5	10.8	0.5	chr17	31646605	31647017	(51610424)	C	LOR1b	LTR/ERV1	(0)	461	1	1595004
745	22.5	5.1	1.5	chr17	31647175	31647369	(51610072)	C	MLT1G	LTR/ERVL-MaLR	(7)	572	370	1595005
1334	14.7	0.9	0.0	chr17	31647361	31647571	(51609870)	+	LOR1b	LTR/ERV1	211	423	(38)	1595006
1289	20.7	10.9	3.0	chr17	31647570	31647942	(51609499)	C	MLT1G	LTR/ERVL-MaLR	(220)	375	1	1595005
2146	10.8	0.0	0.0	chr17	32032882	32033158	(51224283)	+	AluSx1	SINE/Alu	1	277	(35)	1595893
852	12.1	0.8	0.0	chr17	32033162	32033277	(51224164)	C	AluSq10	SINE/Alu	(196)	117	1	1595894
44	23.2	2.5	1.6	chr17	32033300	32033420	(51224021)	+	GA-rich	Low_complexity	1	124	(0)	1595895
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
123	2.1	8.3	1.8	chr17	34507970	34508173	(48749268)	+	(GGAAA)n	Simple_repeat	1	221	(0)	1600530
256	26.0	17.0	1.6	chr17	34508205	34508333	(48749108)	C	MIRb	SINE/MIR	(62)	206	54	1600531
6245	12.9	4.2	2.9	chr17	43333691	43334680	(39922761)	C	LTR13	LTR/ERVK	(0)	1007	5	1617608
13	21.7	7.5	0.0	chr17	45584880	45584932	(37672509)	+	(GGCAGC)n	Simple_repeat	1	57	(0)	1622332
8219	3.9	1.5	1.4	chr17	47362066	47363071	(35894370)	+	LTR13	LTR/ERVK	1	1007	(0)	1625860
3062	12.5	1.6	1.8	chr17	54976889	54977151	(28280290)	+	LOR1a	LTR/ERV1	231	497	(0)	1638862
25	25.1	0.0	3.7	chr17	56751360	56751440	(26506001)	+	GA-rich	Low_complexity	1	81	(0)	1641896
13	13.1	0.0	0.0	chr17	56833697	56833721	(26423720)	+	(CGG)n	Simple_repeat	1	25	(0)	1642079
12	20.1	6.2	2.0	chr17	56833757	56833804	(26423637)	+	(GCGGCGC)n	Simple_repeat	1	51	(0)	1642080
14	31.4	2.1	4.2	chr17	57085116	57085208	(26172233)	+	G-rich	Low_complexity	1	95	(0)	1642628
13	16.0	2.7	2.6	chr17	62704029	62704065	(20553376)	+	G-rich	Low_complexity	1	38	(0)	1653549
19	24.2	1.2	6.0	chr17	62704155	62704236	(20553205)	+	(CGGAGG)n	Simple_repeat	1	83	(0)	1653550
1150	12.7	0.0	1.2	chr17	64918754	64918918	(18338523)	+	AluSx1	SINE/Alu	2	164	(148)	1657590
12	21.5	4.4	2.1	chr17	64918991	64919035	(18338406)	+	(CGG)n	Simple_repeat	1	47	(0)	1657591
18	7.0	3.3	0.0	chr17	64919170	64919199	(18338242)	+	(GGC)n	Simple_repeat	1	31	(0)	1657592
353	29.3	5.7	0.0	chr17	65964585	65964700	(17292741)	+	MER117	DNA/hAT-Charlie	7	129	(68)	1659493
1603	16.3	5.5	3.9	chr17	66224194	66224500	(17032941)	+	AluJb	SINE/Alu	1	312	(0)	1659867
149	14.0	2.5	1.4	chr17	66224503	66224784	(17032657)	+	GA-rich	Low_complexity	1	289	(0)	1659868
2243	8.9	3.0	0.3	chr17	66224797	66225087	(17032354)	+	AluSg7	SINE/Alu	11	309	(0)	1659869
1363	21.1	3.9	4.4	chr17	68495693	68496052	(14761389)	C	MLT1D	LTR/ERVL-MaLR	(0)	627	262	1664305
2199	10.7	0.0	0.0	chr17	68496053	68496341	(14761100)	C	AluSz	SINE/Alu	(23)	289	1	1664306
7577	9.9	1.4	1.1	chr17	68774117	68775120	(14482321)	+	LTR13	LTR/ERVK	1	1007	(0)	1664779
2408	8.3	0.7	0.0	chr17	71924543	71924853	(11332588)	+	AluY	SINE/Alu	9	311	(0)	1669532
68	0.0	0.0	0.0	chr17	71924854	71924914	(11332527)	+	(AAGGA)n	Simple_repeat	1	61	(0)	1669533
51	24.7	3.0	5.8	chr17	71924915	71924938	(11332503)	+	A-rich	Low_complexity	203	226	(0)	1669534
521	27.6	2.9	0.7	chr17	75764441	75764613	(7492828)	+	MIR3	SINE/MIR	12	186	(22)	1676724
18	10.3	2.1	6.2	chr17	77373272	77373318	(5884123)	+	G-rich	Low_complexity	1	48	(0)	1679958
13	22.7	2.0	3.9	chr17	77373399	77373448	(5883993)	+	(GCCCGG)n	Simple_repeat	1	51	(0)	1679959
605	22.6	0.0	0.0	chr17	79652361	79652475	(3604966)	+	AluJo	SINE/Alu	198	312	(0)	1683700
61	14.2	2.4	2.3	chr17	79652497	79652622	(3604819)	+	A-rich	Low_complexity	1	129	(0)	1683701
1203	27.1	19.0	3.0	chr17	79652624	79653455	(3603986)	+	HAL1	LINE/L1	1105	2087	(420)	1683699
235	1.7	0.0	2.4	chr17	80665318	80665564	(2591877)	+	(TTTCC)n	Simple_repeat	1	247	(0)	1685388
2389	4.7	0.7	0.4	chr17	80665565	80665842	(2591599)	C	AluY	SINE/Alu	(32)	279	1	1685389
758	9.6	0.8	1.9	chr17	82292212	82292364	(965077)	+	FLAM_C	SINE/Alu	2	145	(157)	1687435
320	29.2	0.9	0.0	chr17	82292819	82292924	(964517)	C	MLT1K	LTR/ERVL-MaLR	(336)	259	153	1687436
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
8005	6.2	0.4	0.4	chr18	2230199	2231202	(78142083)	C	LTR13	LTR/ERVK	(0)	1007	4	1692381
13	17.4	7.1	3.3	chr18	9913872	9913927	(70459358)	+	(GCGCAGC)n	Simple_repeat	1	60	(0)	1703863
37	23.7	1.1	8.9	chr18	11981285	11981472	(68391813)	+	G-rich	Low_complexity	1	190	(0)	1706731
3107	13.1	1.8	0.2	chr18	12554791	12555279	(67818006)	+	LOR1a	LTR/ERV1	1	497	(0)	1707663
6983	10.6	2.4	1.5	chr18	12555280	12556418	(67816867)	+	L1MA3	LINE/L1	5092	6174	(1391)	1707659
5996	12.0	1.4	5.5	chr18	21784426	21785421	(58587864)	+	LTR13_	LTR/ERVK	1	954	(0)	1713310
2407	17.5	4.3	0.5	chr18	23063439	23063881	(57309404)	+	LOR1b	LTR/ERV1	1	461	(0)	1715512
1373	22.5	12.8	13.3	chr18	23063882	23063893	(57309392)	+	LTR36	LTR/ERV1	256	256	(355)	1715511
2177	14.1	0.0	0.0	chr18	23063894	23064192	(57309093)	+	AluSg	SINE/Alu	1	299	(11)	1715513
1127	21.8	9.0	9.5	chr18	23406408	23406800	(56966485)	+	MER57D	LTR/ERV1	1	397	(14)	1716126
1849	16.8	0.3	1.6	chr18	23406801	23407109	(56966176)	C	AluJr	SINE/Alu	(7)	305	1	1716127
24	22.9	2.7	1.3	chr18	28176821	28176893	(52196392)	+	(GCGGC)n	Simple_repeat	1	75	(0)	1723415
15	17.1	2.4	2.4	chr18	28176906	28176946	(52196339)	+	(CCCCG)n	Simple_repeat	1	42	(0)	1723416
15	14.7	6.2	2.0	chr18	28177023	28177057	(52196228)	+	GA-rich	Low_complexity	1	37	(0)	1723417
28	0.0	0.0	0.0	chr18	28177058	28177083	(52196202)	+	(GGC)n	Simple_repeat	1	26	(0)	1723418
15	14.7	6.2	2.0	chr18	28177084	28177095	(52196190)	+	GA-rich	Low_complexity	38	49	(0)	1723419
12	30.1	0.0	3.5	chr18	28177146	28177202	(52196083)	+	(CCCCGCT)n	Simple_repeat	1	57	(0)	1723420
26	24.3	0.7	8.7	chr18	31498127	31498195	(48875090)	+	G-rich	Low_complexity	1	105	(33)	1727744
17	9.6	8.3	3.9	chr18	31498196	31498243	(48875042)	+	(CGG)n	Simple_repeat	1	52	(0)	1727745
26	24.3	0.7	8.7	chr18	31498244	31498263	(48875022)	+	G-rich	Low_complexity	106	138	(0)	1727744
28	3.3	0.0	0.0	chr18	34976872	34976902	(45396383)	+	(CACCCG)n	Simple_repeat	1	31	(0)	1732683
18	24.1	0.0	6.1	chr18	34976948	34977013	(45396272)	+	(GCG)n	Simple_repeat	1	66	(0)	1732684
215	26.3	2.6	2.6	chr18	35344651	35344728	(45028557)	C	MIRc	SINE/MIR	(18)	250	173	1733186
4375	21.1	7.8	2.5	chr18	35588197	35589750	(44783535)	C	L1MD1	LINE/L1	(4720)	1913	27	1733557
3338	12.4	0.8	0.0	chr18	39159532	39160022	(41213263)	C	LOR1a	LTR/ERV1	(2)	495	1	1738336
2368	18.4	2.2	1.7	chr18	45708960	45709418	(34663867)	C	LOR1b	LTR/ERV1	(0)	461	1	1747317
14	15.1	0.0	10.9	chr18	46917271	46917325	(33455960)	+	(CCTCC)n	Simple_repeat	1	55	(0)	1749455
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
1909	17.7	9.6	0.2	chr18	65073165	65073582	(15299703)	C	LOR1b	LTR/ERV1	(0)	461	1	1777271
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
214	26.2	2.1	2.2	chr19	1813101	1813179	(56804437)	C	L2c	LINE/L2	(1)	3386	3299	1799566
96	49.1	3.2	0.0	chr19	2418298	2419197	(56198419)	+	(TCTC)n	Simple_repeat	1	929	(0)	1800765
2324	10.2	0.0	0.0	chr19	2419199	2419501	(56198115)	C	AluSg	SINE/Alu	(7)	303	1	1800766
13968	16.6	4.0	1.6	chr19	6622243	6622948	(51994668)	+	L1M1	LINE/L1	5650	6380	(1179)	1810729
2245	15.8	6.7	3.6	chr19	6622949	6623394	(51994222)	C	LOR1b	LTR/ERV1	(0)	461	1	1810736
1133	20.2	6.4	0.8	chr19	8268675	8268923	(50348693)	+	L1M1	LINE/L1	118	381	(7184)	1814864
679	7.2	0.0	4.0	chr19	8268934	8269034	(50348582)	+	LTR13	LTR/ERVK	1	97	(910)	1814866
3791	12.0	2.9	3.3	chr19	8269029	8269730	(50347886)	+	LTR13	LTR/ERVK	256	1007	(0)	1814866
14	16.7	2.9	0.0	chr19	11197889	11197922	(47419694)	+	G-rich	Low_complexity	1	35	(0)	1821708
418	19.9	0.0	0.0	chr19	11198073	11198160	(47419456)	+	MIR	SINE/MIR	105	191	(71)	1821709
1097	22.2	11.8	1.8	chr19	11767468	11767924	(46849692)	C	LTR26E	LTR/ERV1	(0)	622	48	1823096
1464	14.2	5.2	14.3	chr19	11941917	11942279	(46675337)	C	LTR60	LTR/ERV1	(258)	328	1	1823437
312	22.2	0.0	4.0	chr19	11942287	11942361	(46675255)	C	MER68B	LTR/ERVL	(489)	75	4	1823438
2432	16.4	5.4	2.2	chr19	11942460	11942907	(46674709)	C	LTR2	LTR/ERV1	(0)	463	1	1823439
6408	10.7	2.8	1.2	chr19	11988415	11989352	(46628264)	C	LTR13_	LTR/ERVK	(0)	954	1	1823531
1160	16.1	5.6	1.9	chr19	12481720	12481924	(46135692)	+	AluJr4	SINE/Alu	84	296	(16)	1824513
49	4.9	1.9	8.6	chr19	12481925	12482027	(46135589)	+	A-rich	Low_complexity	1	105	(0)	1824514
685	16.4	0.0	0.0	chr19	12482034	12482137	(46135479)	+	AluJr	SINE/Alu	18	121	(191)	1824515
49	2.2	0.0	0.0	chr19	12482139	12482184	(46135432)	+	(AC)n	Simple_repeat	1	46	(0)	1824516
37	2.6	0.0	0.0	chr19	12482186	12482224	(46135392)	+	(CTCCCT)n	Simple_repeat	1	39	(0)	1824517
2498	7.1	0.3	0.0	chr19	12918672	12918980	(45698636)	+	AluSg	SINE/Alu	1	310	(0)	1825529
1506	17.5	7.4	0.0	chr19	13547007	13547258	(45070358)	+	AluJr4	SINE/Alu	12	283	(29)	1827062
98	1.1	0.0	0.0	chr19	13547259	13547349	(45070267)	+	(AAAGG)n	Simple_repeat	1	91	(0)	1827063
1456	24.0	2.4	9.0	chr19	13547350	13547451	(45070165)	+	L1ME4b	LINE/L1	427	527	(365)	1827060
495	26.5	7.3	3.5	chr19	13547490	13547661	(45069955)	C	MIR	SINE/MIR	(23)	239	61	1827064
19	22.8	0.0	0.0	chr19	15631879	15631919	(42985697)	+	G-rich	Low_complexity	1	41	(0)	1832260
400	24.8	6.4	0.0	chr19	15631993	15632109	(42985507)	+	ORSL-2b	DNA/hAT-Tip100	30	154	(354)	1832261
146	0.6	3.6	4.0	chr19	19744104	19744295	(38873321)	+	(TTCCT)n	Simple_repeat	1	199	(0)	1841552
2238	9.2	0.3	1.9	chr19	19772510	19772824	(38844792)	+	AluSx3	SINE/Alu	1	310	(1)	1841594
3273	20.7	6.7	3.7	chr19	19772825	19772867	(38844749)	+	L1MDa	LINE/L1	3695	3736	(2801)	1841589
1057	20.0	8.6	9.8	chr19	19772868	19773043	(38844573)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	205	1841595
2410	6.8	0.0	0.7	chr19	19773044	19773352	(38844264)	C	AluSg4	SINE/Alu	(2)	308	2	1841596
12	18.0	4.0	5.8	chr19	22807663	22807712	(35809904)	+	(CCCG)n	Simple_repeat	1	52	(0)	1845758
2249	18.3	1.7	3.3	chr19	32099917	32100279	(26517337)	+	LOR1b	LTR/ERV1	97	461	(0)	1854202
678	14.3	1.8	1.8	chr19	32100280	32100384	(26517232)	C	LTR54	LTR/ERV1	(405)	105	1	1854200
560	10.3	2.5	0.0	chr19	34678152	34678229	(23939387)	C	AluSz	SINE/Alu	(224)	88	9	1858989
1618	10.4	0.5	1.4	chr19	34678230	34678450	(23939166)	+	AluSx3	SINE/Alu	82	300	(11)	1858990
245	31.9	2.1	0.0	chr19	35693566	35693656	(22923960)	C	MLT1K	LTR/ERVL-MaLR	(428)	167	75	1860986
338	19.9	1.8	0.0	chr19	35693876	35693979	(22923637)	+	LTR41	LTR/ERVL	90	194	(564)	1860987
104	17.0	0.4	6.7	chr19	35694035	35694303	(22923313)	+	(CCT)n	Simple_repeat	1	270	(0)	1860988
336	11.5	0.0	15.4	chr19	35694309	35694332	(22923284)	C	FRAM	SINE/Alu	(20)	156	136	1860989
904	19.2	0.0	6.2	chr19	35694333	35694509	(22923107)	+	AluJo	SINE/Alu	137	302	(10)	1860990
336	11.5	0.0	15.4	chr19	35694510	35694562	(22923054)	C	FRAM	SINE/Alu	(41)	135	91	1860989
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
1574	11.2	7.8	0.9	chr19	36614645	36614859	(22002757)	+	AluSx	SINE/Alu	1	231	(81)	1862891
78	2.2	0.0	5.0	chr19	36614881	36614981	(22002635)	+	(TTCCT)n	Simple_repeat	1	101	(0)	1862892
2269	10.5	1.9	1.6	chr19	36614982	36615279	(22002337)	C	AluSx	SINE/Alu	(9)	303	5	1862893
5873	14.3	3.3	5.7	chr19	37227520	37228541	(21389075)	C	LTR13	LTR/ERVK	(8)	999	3	1864068
237	21.1	0.0	1.9	chr19	37469922	37469974	(21147642)	+	MER5B	DNA/hAT-Charlie	127	178	(0)	1864484
2056	13.5	0.7	2.6	chr19	39229684	39229995	(19387621)	+	AluJb	SINE/Alu	1	306	(6)	1868605
53	25.8	1.9	1.9	chr19	39229996	39230152	(19387464)	+	G-rich	Low_complexity	1	160	(0)	1868606
87	0.0	0.0	0.0	chr19	39230153	39230229	(19387387)	+	(AAGGA)n	Simple_repeat	1	77	(0)	1868607
31	5.8	0.0	0.0	chr19	39230324	39230359	(19387257)	+	(TG)n	Simple_repeat	1	36	(0)	1868608
804	15.7	0.0	0.0	chr19	39230373	39230487	(19387129)	C	AluJb	SINE/Alu	(197)	115	1	1868609
5711	15.2	2.7	2.8	chr19	39258242	39259208	(19358408)	C	LTR13A	LTR/ERVK	(0)	966	1	1868683
590	11.6	1.6	0.5	chr19	42370345	42370655	(16246961)	C	MSR1	Satellite	(1)	314	1	1875127
31	0.0	0.0	0.0	chr19	42370844	42370872	(16246744)	+	(G)n	Simple_repeat	1	29	(0)	1875128
2479	16.5	6.1	1.1	chr19	43115183	43115618	(15501998)	C	LOR1b	LTR/ERV1	(0)	461	3	1876249
1215	13.4	0.2	0.0	chr19	44410766	44412174	(14205442)	+	ACRO1	Satellite/acro	1	1411	(0)	1878697
5497	16.4	4.2	3.4	chr19	46242594	46243274	(12374342)	C	L1MCa	LINE/L1	(2408)	3913	3224	1883181
164	2.3	2.8	0.0	chr19	46243275	46243451	(12374165)	+	(TTTCC)n	Simple_repeat	1	182	(0)	1883183
2053	11.6	5.2	0.0	chr19	46243460	46243751	(12373865)	C	AluSq2	SINE/Alu	(0)	313	6	1883184
2403	8.7	0.7	0.3	chr19	46448991	46449299	(12168317)	C	AluSx1	SINE/Alu	(2)	310	1	1883692
322	31.9	5.4	2.5	chr19	46449307	46449467	(12168149)	+	MIRb	SINE/MIR	102	267	(1)	1883693
2246	15.6	10.8	1.7	chr19	46449476	46449893	(12167723)	C	LOR1b	LTR/ERV1	(0)	461	1	1883694
7404	9.5	1.1	0.6	chr19	48259616	48260614	(10357002)	C	LTR13	LTR/ERVK	(0)	1007	4	1888303
5702	15.8	3.1	0.5	chr19	48780675	48781615	(9836001)	C	LTR13A	LTR/ERVK	(0)	966	1	1889586
8034	6.3	1.3	0.2	chr19	49266236	49267229	(9350387)	+	LTR13	LTR/ERVK	3	1007	(0)	1890753
4267	15.9	0.8	4.1	chr19	50135484	50135964	(8481652)	C	L1P4	LINE/L1	(2469)	3677	3219	1892740
1885	14.3	2.4	0.9	chr19	50135965	50136288	(8481328)	+	L1PB1	LINE/L1	5822	6150	(1)	1892741
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
12862	16.9	3.4	4.7	chr19	51304262	51304357	(7313259)	C	MER21-int	LTR/ERVL	(600)	3591	3512	1895343
1970	20.0	7.8	5.1	chr19	51304358	51304764	(7312852)	C	LOR1b	LTR/ERV1	(0)	461	38	1895345
1008	29.6	9.8	5.0	chr19	51595032	51595932	(7021684)	+	L2b	LINE/L2	2430	3375	(0)	1895867
2427	6.3	0.0	0.0	chr19	51987422	51987708	(6629908)	C	AluSc5	SINE/Alu	(22)	287	1	1896598
3400	10.9	4.0	0.0	chr19	52956727	52957204	(5660412)	+	LTR2C	LTR/ERV1	4	501	(0)	1898547
1106	13.8	0.0	0.0	chr19	52957205	52957363	(5660253)	+	HERVE-int	LTR/ERV1	1	159	(7688)	1898547
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
462	26.9	10.4	3.2	chr19	56252868	56253117	(2364499)	C	LTR41B	LTR/ERVL	(488)	270	1	1905468
875	16.8	6.5	0.0	chr19	56253144	56253286	(2364330)	+	AluJr	SINE/Alu	149	301	(11)	1905469
2897	15.7	0.2	2.0	chr19	57190110	57190615	(1427001)	+	LOR1a	LTR/ERV1	1	497	(0)	1907409
545	30.5	9.7	1.9	chr19	57190619	57190939	(1426677)	+	L2	LINE/L2	2207	2555	(864)	1907414
3606	11.2	5.4	1.1	chr19	57579173	57579723	(1037893)	C	MER4D1	LTR/ERV1	(324)	576	1	1908004
2161	13.3	0.3	0.0	chr19	57769005	57769312	(848304)	+	AluSz6	SINE/Alu	1	309	(3)	1908289
2481	28.0	6.6	7.6	chr2	1049992	1051392	(241142137)	C	L1M5	LINE/L1	(784)	5362	3977	1911846
2411	10.1	0.7	0.0	chr2	3336486	3336793	(238856736)	+	AluSx	SINE/Alu	1	310	(2)	1914328
141	4.8	0.0	12.9	chr2	3336824	3337164	(238856365)	+	G-rich	Low_complexity	1	341	(0)	1914329
27	5.4	2.6	0.0	chr2	11344312	11344350	(230849179)	+	(GGCCC)n	Simple_repeat	1	40	(0)	1926452
14	17.1	0.0	2.9	chr2	11344466	11344500	(230849029)	+	(GCCCC)n	Simple_repeat	1	35	(0)	1926453
3411	13.3	0.0	0.2	chr2	12020892	12021389	(230172140)	+	LOR1a	LTR/ERV1	1	497	(0)	1927639
662	31.2	2.1	1.7	chr2	12021390	12021443	(230172086)	+	MIR	SINE/MIR	186	240	(22)	1927638
3115	13.8	0.4	0.6	chr2	12863743	12864238	(229329291)	+	LOR1a	LTR/ERV1	1	495	(2)	1928996
1779	25.4	6.6	4.8	chr2	12864239	12864309	(229329220)	+	MER76	LTR/ERVL	584	654	(37)	1928995
341	16.2	2.9	0.0	chr2	12864318	12864403	(229329126)	C	L1MEc	LINE/L1	(3155)	3382	3292	1928994
295	26.8	5.9	11.2	chr2	20636258	20636400	(221557129)	+	MIRc	SINE/MIR	46	180	(88)	1940671
47	2.3	0.0	0.0	chr2	30501077	30501121	(211692408)	+	(TG)n	Simple_repeat	1	45	(0)	1957141
2862	13.1	1.6	2.6	chr2	30501122	30501313	(211692216)	+	LOR1a	LTR/ERV1	300	497	(0)	1957140
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
2199	15.8	1.3	0.8	chr2	33356003	33356397	(208837132)	C	LOR1b	LTR/ERV1	(0)	461	65	1961831
13107	17.3	5.4	1.0	chr2	35529431	35530207	(206663322)	C	L1MA3	LINE/L1	(5710)	1855	1068	1964907
2122	19.2	2.8	5.1	chr2	35530208	35530679	(206662850)	C	LOR1b	LTR/ERV1	(0)	461	1	1964914
3327	11.2	1.2	0.2	chr2	40381613	40382104	(201811425)	+	LOR1a	LTR/ERV1	1	497	(0)	1972499
256	31.8	12.3	6.2	chr2	40382105	40382235	(201811294)	+	L2c	LINE/L2	3204	3355	(32)	1972498
1418	15.0	27.9	0.3	chr2	41535481	41535855	(200657674)	+	LOR1a	LTR/ERV1	1	480	(17)	1974053
2541	17.6	2.8	0.2	chr2	42392493	42392941	(199800588)	C	LOR1b	LTR/ERV1	(0)	461	1	1975451
1613	17.3	1.7	7.1	chr2	47499634	47500000	(194693529)	+	LOR1a	LTR/ERV1	1	347	(150)	1984218
1005	12.4	0.0	0.0	chr2	47500006	47500150	(194693379)	+	LOR1a	LTR/ERV1	353	497	(0)	1984219
230	30.6	14.9	1.0	chr2	47500290	47500481	(194693048)	C	MIRb	SINE/MIR	(3)	265	35	1984220
211	17.1	0.0	0.0	chr2	54331167	54331201	(187862328)	C	MIRb	SINE/MIR	(12)	256	222	1994183
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
3243	13.4	0.6	0.4	chr2	59602252	59602747	(182590782)	+	LOR1a	LTR/ERV1	1	497	(0)	2001331
321	25.6	8.2	2.9	chr2	59602748	59602794	(182590735)	C	L1ME2	LINE/L1	(3290)	3029	2978	2001330
869	26.6	1.9	0.0	chr2	59602985	59603236	(182590293)	C	L1ME2	LINE/L1	(3320)	2999	2743	2001330
202	1.1	0.0	0.0	chr2	60389034	60389216	(181804313)	+	(AGGAA)n	Simple_repeat	1	183	(0)	2002388
1804	18.8	1.3	0.3	chr2	60389442	60389750	(181803779)	C	AluJb	SINE/Alu	(0)	312	1	2002389
16	22.5	4.5	2.9	chr2	61177289	61177354	(181016175)	+	(CCCCG)n	Simple_repeat	1	69	(0)	2003841
16	16.8	7.3	1.7	chr2	61177366	61177378	(181016151)	+	(GGCCGG)n	Simple_repeat	1	58	(0)	2003842
19	11.6	0.0	4.9	chr2	61177379	61177419	(181016110)	+	G-rich	Low_complexity	1	41	(0)	2003843
3357	14.6	9.5	0.3	chr2	61648597	61649172	(180544357)	+	MER41B	LTR/ERV1	1	634	(0)	2004845
883	24.1	6.0	3.1	chr2	61649173	61649226	(180544303)	C	MLT1C	LTR/ERVL-MaLR	(245)	222	166	2004844
1444	18.9	7.3	2.5	chr2	61649227	61649552	(180543977)	C	LOR1b	LTR/ERV1	(0)	461	119	2004846
580	4.2	0.0	0.0	chr2	61649581	61649651	(180543878)	C	MER41A	LTR/ERV1	(86)	468	398	2004847
7269	5.6	0.8	0.0	chr2	66094554	66095739	(176097790)	C	L1PA6	LINE/L1	(19)	6135	4941	2012360
27	0.0	0.0	0.0	chr2	66095869	66095894	(176097635)	+	(T)n	Simple_repeat	1	26	(0)	2012361
236	26.1	5.2	4.2	chr2	66096089	66096184	(176097345)	C	Chompy-7_Croc	DNA/PIF-Harbinger	(860)	672	576	2012362
2087	16.7	7.6	0.7	chr2	67518136	67518564	(174674965)	C	LOR1b	LTR/ERV1	(0)	461	1	2014205
255	4.2	0.0	0.4	chr2	67906469	67906741	(174286788)	+	(GGAAA)n	Simple_repeat	1	273	(0)	2014731
14	15.4	7.4	3.5	chr2	67906746	67906799	(174286730)	+	G-rich	Low_complexity	1	58	(0)	2014732
13	17.7	4.2	4.0	chr2	70554078	70554125	(171639404)	+	G-rich	Low_complexity	1	50	(0)	2019278
3690	6.5	0.2	0.0	chr2	75459465	75459926	(166733603)	+	LTR2	LTR/ERV1	1	463	(0)	2026996
2747	15.2	0.9	0.0	chr2	83058798	83059245	(159134284)	C	LOR1a	LTR/ERV1	(0)	497	46	2037144
2540	16.8	4.3	0.2	chr2	85972366	85972807	(156220722)	+	LOR1b	LTR/ERV1	1	461	(0)	2041843
1506	20.9	1.5	9.2	chr2	85972808	85972853	(156220676)	+	MER58B	DNA/hAT-Charlie	33	76	(265)	2041842
1779	17.5	0.0	5.7	chr2	85972854	85973184	(156220345)	C	AluJb	SINE/Alu	(0)	312	1	2041844
3210	11.7	3.4	1.2	chr2	88946119	88946604	(153246925)	+	LOR1a	LTR/ERV1	1	497	(0)	2046835
1883	21.4	4.8	2.2	chr2	88946605	88946940	(153246589)	+	MER65C	LTR/ERV1	116	457	(4)	2046834
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
1473	22.6	5.0	2.0	chr2	90210890	90211223	(151982306)	C	MER65C	LTR/ERV1	(4)	457	116	2048043
2795	15.3	2.8	0.0	chr2	90211224	90211706	(151981823)	C	LOR1a	LTR/ERV1	(0)	497	1	2048044
2403	8.0	1.3	0.0	chr2	98047450	98047750	(144145779)	C	AluSp	SINE/Alu	(8)	305	1	2054470
1630	18.9	2.1	4.4	chr2	98047751	98047886	(144145643)	+	MER41-int	LTR/ERV1	1167	1293	(6244)	2054469
81	8.1	3.0	1.4	chr2	98047887	98048020	(144145509)	+	(TTCCT)n	Simple_repeat	1	138	(0)	2054471
2226	10.5	0.3	0.0	chr2	98048023	98048317	(144145212)	C	AluSp	SINE/Alu	(17)	296	1	2054472
2617	6.8	0.0	0.0	chr2	100559902	100560212	(141633317)	+	AluSc8	SINE/Alu	1	311	(0)	2058101
1680	14.5	12.0	4.5	chr2	100560213	100560588	(141632941)	C	LOR1b	LTR/ERV1	(53)	408	1	2058102
3027	26.3	11.8	6.5	chr2	101652720	101653336	(140540193)	+	HAL1	LINE/L1	1204	1858	(649)	2059986
2495	16.4	2.4	2.8	chr2	101653337	101653799	(140539730)	+	LOR1b	LTR/ERV1	1	461	(0)	2059991
3027	26.3	11.8	6.5	chr2	101653800	101654405	(140539124)	+	HAL1	LINE/L1	1859	2499	(8)	2059986
3371	12.6	0.8	2.6	chr2	106365006	106365510	(135828019)	C	LOR1a	LTR/ERV1	(0)	497	2	2066308
3230	9.8	7.2	0.0	chr2	106628205	106628665	(135564864)	+	LOR1a	LTR/ERV1	1	497	(0)	2066782
1287	19.8	2.1	9.0	chr2	106628925	106629065	(135564464)	C	MER2	DNA/TcMar-Tigger	(0)	345	223	2066783
2331	8.3	0.0	2.4	chr2	106629066	106629380	(135564149)	C	AluY	SINE/Alu	(0)	311	1	2066784
1808	19.4	11.7	1.2	chr2	109033363	109033678	(133159851)	C	LOR1b	LTR/ERV1	(0)	461	120	2070167
2253	8.6	0.3	1.0	chr2	109033679	109033970	(133159559)	+	AluSx1	SINE/Alu	9	298	(14)	2070168
4364	15.4	4.2	0.8	chr2	112767532	112767774	(129425755)	C	L1MB8	LINE/L1	(3)	6175	5883	2075699
2470	17.4	4.1	0.7	chr2	112767775	112768219	(129425310)	C	LOR1b	LTR/ERV1	(0)	461	1	2075700
329	8.5	1.5	3.4	chr2	113602929	113603477	(128590052)	+	(CTAACC)n	Simple_repeat	1	557	(0)	2077037
5958	3.6	0.4	0.6	chr2	113603478	113604530	(128588999)	C	TAR1	Satellite/telo	(316)	1050	1	2077038
14	10.1	6.2	0.0	chr2	113889918	113889949	(128303580)	+	G-rich	Low_complexity	1	34	(0)	2077575
17	11.7	0.0	8.9	chr2	113890006	113890050	(128303479)	+	GA-rich	Low_complexity	1	45	(0)	2077576
12	11.9	0.0	6.5	chr2	113890041	113890071	(128303458)	+	G-rich	Low_complexity	1	31	(0)	2077577
18	9.7	0.0	5.4	chr2	113890231	113890267	(128303262)	+	(AGC)n	Simple_repeat	1	37	(0)	2077578
579	18.3	9.0	1.4	chr2	117670695	117670838	(124522691)	C	LTR16A1	LTR/ERVL	(0)	456	301	2082587
3288	13.5	1.2	0.6	chr2	117670972	117671462	(124522067)	C	LOR1a	LTR/ERV1	(3)	494	1	2082588
28495	2.2	0.1	0.1	chr2	118137001	118143020	(124050509)	C	L1PA2	LINE/L1	(9)	6146	125	2083250
2185	15.8	2.3	2.6	chr2	118143024	118143088	(124050441)	C	L1PB4	LINE/L1	(117)	6039	5981	2083251
2196	9.9	1.8	0.0	chr2	118143089	118143361	(124050168)	C	AluSx1	SINE/Alu	(13)	299	22	2083252
487	25.4	7.7	2.3	chr2	121300981	121301153	(120892376)	+	MLT1J	LTR/ERVL-MaLR	224	406	(106)	2088465
29	4.3	6.0	0.0	chr2	121301292	121301306	(120892223)	+	(AAGG)n	Simple_repeat	1	17	(0)	2088467
123	1.7	0.0	0.8	chr2	121301307	121301427	(120892102)	+	(AGGAA)n	Simple_repeat	1	121	(0)	2088468
29	4.3	6.0	0.0	chr2	121301428	121301461	(120892068)	+	(AAGG)n	Simple_repeat	2	36	(0)	2088469
437	21.9	11.9	0.0	chr2	121301479	121301574	(120891955)	+	MLT1J-int	LTR/ERVL-MaLR	493	601	(786)	2088465
761	26.6	5.5	0.5	chr2	121301608	121301987	(120891542)	+	L1ME3D	LINE/L1	5219	5644	(520)	2088470
2284	10.4	1.3	0.0	chr2	126264438	126264746	(115928783)	+	AluSp	SINE/Alu	1	313	(0)	2095693
102	3.3	0.0	9.5	chr2	126264747	126264936	(115928593)	+	(AAGGA)n	Simple_repeat	1	190	(0)	2095694
260	31.2	0.0	0.0	chr2	126264939	126265034	(115928495)	+	L1MC	LINE/L1	5695	5790	(2092)	2095695
957	19.2	2.2	0.0	chr2	126943317	126943493	(115250036)	C	L1MC1	LINE/L1	(0)	6333	6153	2096640
3184	13.4	1.4	1.4	chr2	126943494	126943521	(115250008)	C	LTR72	LTR/ERV1	(1)	518	491	2096641
2275	16.0	11.7	1.2	chr2	126943522	126943933	(115249596)	+	LOR1b	LTR/ERV1	1	461	(0)	2096642
3360	12.8	1.4	1.4	chr2	126943934	126944419	(115249110)	C	LTR72	LTR/ERV1	(29)	490	4	2096641
13253	19.6	5.3	1.6	chr2	129692055	129695537	(112497992)	+	L1MB8	LINE/L1	2610	5869	(775)	2100729
6405	10.8	0.3	0.6	chr2	129695539	129696405	(112497124)	+	THE1C-int	LTR/ERVL-MaLR	716	1580	(0)	2100732
647	16.8	0.0	0.0	chr2	129702449	129702561	(112490968)	C	L1MB2	LINE/L1	(194)	5977	5865	2100742
2238	18.2	6.3	0.5	chr2	129702566	129702996	(112490533)	C	LOR1a	LTR/ERV1	(0)	497	40	2100743
277	21.5	6.5	2.4	chr2	130976816	130977791	(111215738)	+	(GT)n	Simple_repeat	1	1039	(0)	2102633
1986	17.5	12.4	0.0	chr2	130977792	130978185	(111215344)	C	LOR1b	LTR/ERV1	(11)	450	1	2102634
1675	18.1	4.8	3.8	chr2	130984963	130985329	(111208200)	C	LOR1-int	LTR/ERV1	(7749)	371	1	2102642
2017	16.7	12.8	0.0	chr2	130985330	130985731	(111207798)	C	LOR1b	LTR/ERV1	(0)	461	1	2102642
129	22.2	7.7	2.1	chr2	130985733	130986226	(111207303)	+	(GT)n	Simple_repeat	1	532	(0)	2102643
1127	11.6	0.3	0.0	chr2	132286523	132287784	(109905745)	C	ACRO1	Satellite/acro	(55)	1265	1	2104358
4290	13.1	0.3	0.2	chr2	132373090	132373722	(109819807)	C	MER41B	LTR/ERV1	(0)	634	1	2104494
12254	15.5	3.2	2.1	chr2	132373723	132373773	(109819756)	C	ERV24_Prim-int	LTR/ERV1	(7498)	77	27	2104492
710	15.5	2.5	0.0	chr2	132373782	132373897	(109819632)	+	LOR1b	LTR/ERV1	343	461	(0)	2104495
846	19.3	0.0	0.0	chr2	132373898	132374045	(109819484)	C	MER44D	DNA/TcMar-Tigger	(555)	150	3	2104496
292	9.3	0.0	0.0	chr2	132374547	132374589	(109818940)	+	Tigger7	DNA/TcMar-Tigger	91	133	(2358)	2104498
2106	15.7	11.3	0.5	chr2	132374595	132375005	(109818524)	C	LOR1b	LTR/ERV1	(0)	461	1	2104499
304	9.6	0.0	1.1	chr2	135117410	135117841	(107075688)	+	(TTCTTC)n	Simple_repeat	1	429	(0)	2108486
1750	18.5	3.2	0.3	chr2	135117842	135118144	(107075385)	C	AluJb	SINE/Alu	(0)	312	1	2108487
2235	12.2	0.0	0.3	chr2	142418560	142418862	(99774667)	+	AluSq2	SINE/Alu	1	302	(11)	2118768
75	0.0	0.0	3.8	chr2	142418863	142418942	(99774587)	+	(AAAGG)n	Simple_repeat	1	80	(0)	2118769
2005	17.4	10.0	0.5	chr2	149735642	149736058	(92457471)	C	LOR1b	LTR/ERV1	(0)	461	1	2128485
3054	15.3	0.0	0.8	chr2	154389627	154390127	(87803402)	C	LOR1a	LTR/ERV1	(0)	497	1	2134908
1791	17.9	3.9	0.7	chr2	157826380	157826680	(84366849)	+	AluJb	SINE/Alu	1	311	(1)	2139242
150	10.1	3.5	3.3	chr2	157826681	157826969	(84366560)	+	A-rich	Low_complexity	1	299	(0)	2139243
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
15	30.4	2.5	2.4	chr2	163348534	163348613	(78844916)	+	(CTGCTT)n	Simple_repeat	1	82	(0)	2146828
2091	18.1	4.8	3.5	chr2	163911605	163912057	(78281472)	+	LOR1b	LTR/ERV1	1	459	(2)	2147597
802	19.4	7.1	1.2	chr2	163912058	163912210	(78281319)	C	Charlie1b	DNA/hAT-Charlie	(5)	518	359	2147598
36	0.0	0.0	0.0	chr2	165953652	165953685	(76239844)	+	(CCCGCTCA)n	Simple_repeat	1	34	(0)	2150388
6169	13.7	1.9	1.9	chr2	185290962	185291936	(56901593)	+	LTR13	LTR/ERVK	32	1007	(0)	2177605
3267	11.9	1.6	0.2	chr2	187959749	187960238	(54233291)	C	LOR1a	LTR/ERV1	(0)	497	1	2181057
567	32.5	5.0	6.9	chr2	190570321	190570815	(51622714)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	28	2184546
85	5.1	0.0	5.8	chr2	195296649	195296787	(46896742)	+	(GAAAG)n	Simple_repeat	1	139	(0)	2190699
32	0.0	3.0	0.0	chr2	195296846	195296878	(46896651)	+	(GGGAAG)n	Simple_repeat	1	34	(0)	2190700
382	14.2	4.1	2.4	chr2	201232110	201232223	(40961306)	C	LTR41C	LTR/ERVL	(6)	752	609	2199793
825	20.3	12.5	5.8	chr2	201232239	201232551	(40960978)	C	LTR41C	LTR/ERVL	(364)	337	1	2199793
46	0.0	0.0	0.0	chr2	203535259	203535300	(38658229)	+	(TGAC)n	Simple_repeat	1	42	(0)	2204168
33	12.7	1.6	1.6	chr2	203535304	203535365	(38658164)	+	(GGC)n	Simple_repeat	1	63	(0)	2204169
31	25.4	4.6	2.2	chr2	203535450	203535580	(38657949)	+	(CCGCCCG)n	Simple_repeat	1	137	(0)	2204170
2499	18.6	1.7	1.7	chr2	203767213	203767672	(38425857)	+	LOR1b	LTR/ERV1	2	461	(0)	2204608
246	23.6	6.5	4.0	chr2	203767680	203767754	(38425775)	C	MLT1J	LTR/ERVL-MaLR	(94)	418	342	2204609
516	26.0	7.8	3.9	chr2	209057594	209057853	(33135676)	C	L1ME1	LINE/L1	(5495)	1608	1338	2212560
2305	8.2	0.0	3.8	chr2	215311287	215311604	(26881925)	+	AluSq2	SINE/Alu	5	310	(3)	2220904
59	6.2	6.7	0.9	chr2	220845928	220846031	(21347498)	+	(AGGGAA)n	Simple_repeat	1	111	(0)	2230154
608	27.2	1.9	1.9	chr2	233251177	233251337	(8942192)	C	MIRb	SINE/MIR	(26)	242	82	2250204
2612	15.8	3.2	4.0	chr2	237927922	237928382	(4265147)	C	LOR1a	LTR/ERV1	(0)	497	40	2257068
3339	19.8	5.0	0.1	chr2	238808687	238809413	(3384116)	C	L1MDa	LINE/L1	(4536)	2097	1334	2258262
2925	13.7	1.2	1.0	chr2	240518110	240518605	(1674924)	+	LOR1a	LTR/ERV1	1	497	(0)	2260113
1865	18.7	12.8	0.0	chr2	240524929	240525330	(1668199)	+	LOR1b	LTR/ERV1	1	461	(0)	2260125
371	18.5	2.4	5.8	chr2	240525331	240525377	(1668152)	+	MER5A	DNA/hAT-Charlie	42	86	(103)	2260124
2249	17.2	5.4	0.0	chr2	240540349	240540784	(1652745)	+	LOR1b	LTR/ERV1	1	461	(0)	2260152
2081	13.4	4.8	1.1	chr2	240540785	240541146	(1652383)	+	LOR1-int	LTR/ERV1	1	376	(7744)	2260152
8324	4.1	2.1	0.2	chr2	241732072	241733059	(460470)	C	LTR13	LTR/ERVK	(0)	1007	1	2261638
14	8.5	4.7	6.7	chr20	297647	297689	(64146478)	+	(CCCGGCGG)n	Simple_repeat	1	45	(0)	2262587
3439	12.9	0.0	0.4	chr20	4771924	4772422	(59671745)	+	LOR1a	LTR/ERV1	1	497	(0)	2271298
25	19.8	2.6	3.8	chr20	8130075	8130151	(56314016)	+	A-rich	Low_complexity	1	79	(0)	2276794
2960	17.8	0.2	0.6	chr20	19685602	19686100	(44758067)	C	LOR1a	LTR/ERV1	(0)	497	1	2294478
132	3.7	4.1	0.6	chr20	21598635	21598805	(42845362)	+	(TCTT)n	Simple_repeat	1	178	(0)	2297340
665	19.1	0.0	5.8	chr20	21598806	21598888	(42845279)	C	FLAM_C	SINE/Alu	(1)	132	57	2297341
2974	14.1	2.6	2.6	chr20	21598889	21599384	(42844783)	C	LOR1a	LTR/ERV1	(0)	497	2	2297342
2134	14.9	1.7	0.6	chr20	24360350	24360700	(40083467)	+	L1PA16	LINE/L1	5812	6166	(0)	2300816
70	1.5	0.0	0.0	chr20	24360708	24360774	(40083393)	+	(AAAGG)n	Simple_repeat	1	67	(0)	2300817
759	25.6	9.9	5.9	chr20	24361197	24361589	(40082578)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	69	2300818
15	29.0	0.0	0.0	chr20	25390896	25390945	(39053222)	+	(CCCCCG)n	Simple_repeat	1	50	(0)	2302098
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
678	23.5	0.4	0.2	chr20	29755374	29756046	(34688121)	+	GA-rich	Low_complexity	865	1538	(0)	2304508
58	8.3	0.7	9.9	chr20	29756077	29756217	(34687950)	+	(TTTC)n	Simple_repeat	1	142	(0)	2304509
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
17	17.3	0.0	5.9	chr20	36573656	36573706	(27870461)	+	(CGCGCCC)n	Simple_repeat	1	51	(0)	2317921
20	20.2	8.6	3.0	chr20	38692446	38692538	(25751629)	+	(TTCC)n	Simple_repeat	1	101	(0)	2322668
365	26.6	3.4	0.0	chr20	43590252	43590366	(20853801)	+	L2b	LINE/L2	3036	3168	(258)	2331495
83	21.2	0.4	8.0	chr20	45267828	45268102	(19176065)	+	GA-rich	Low_complexity	1	276	(0)	2335265
899	21.8	0.0	1.1	chr20	45268103	45268276	(19175891)	+	AluJr4	SINE/Alu	136	307	(5)	2335266
2427	15.9	5.6	0.5	chr20	47917525	47917961	(16526206)	+	LOR1b	LTR/ERV1	1	461	(0)	2341106
276	28.6	3.1	1.6	chr20	47918026	47918153	(16526014)	C	MLT1N2	LTR/ERVL-MaLR	(1)	561	432	2341107
244	30.2	9.1	2.7	chr20	49617785	49617968	(14826199)	+	L2a	LINE/L2	1919	2115	(1304)	2344906
2431	8.7	0.3	0.0	chr20	50109470	50109768	(14334399)	+	AluSg	SINE/Alu	2	301	(9)	2346103
735	28.5	12.0	0.3	chr20	50109769	50110010	(14334157)	C	MamRep137	DNA/TcMar-Tigger	(112)	398	115	2346102
500	26.6	0.0	0.0	chr20	50665902	50666014	(13778153)	+	MLT1K	LTR/ERVL-MaLR	460	572	(23)	2347420
47	0.0	0.0	0.0	chr20	50666184	50666226	(13777941)	+	(TTTCT)n	Simple_repeat	1	43	(0)	2347421
2062	10.1	0.4	4.7	chr20	50666227	50666523	(13777644)	C	AluSx1	SINE/Alu	(28)	284	1	2347422
14	0.0	4.8	0.0	chr20	52972324	52972344	(11471823)	+	(GGA)n	Simple_repeat	1	22	(0)	2352541
2150	5.5	1.2	0.0	chr20	53447913	53448168	(10995999)	C	AluY	SINE/Alu	(11)	300	42	2353496
3464	10.7	0.0	3.1	chr20	53448169	53448582	(10995585)	C	LOR1a	LTR/ERV1	(84)	413	2	2353495
497	29.2	7.5	5.2	chr20	53454609	53454703	(10989464)	+	L2a	LINE/L2	3094	3179	(247)	2353509
3190	13.7	1.2	0.4	chr20	53454704	53455195	(10988972)	+	LOR1a	LTR/ERV1	1	496	(1)	2353510
497	29.2	7.5	5.2	chr20	53455196	53455409	(10988758)	+	L2a	LINE/L2	3180	3411	(15)	2353509
195	35.5	3.8	0.0	chr20	56917044	56917119	(7527048)	+	MIRb	SINE/MIR	188	266	(2)	2360173
21	24.4	0.0	0.0	chr20	58889936	58889988	(5554179)	+	(CGG)n	Simple_repeat	1	53	(0)	2363579
39	30.6	1.0	1.0	chr20	58890122	58890238	(5553929)	+	GA-rich	Low_complexity	1	117	(0)	2363580
28	30.9	1.1	0.0	chr20	58890245	58890337	(5553830)	+	(GCC)n	Simple_repeat	1	94	(0)	2363581
13	15.9	2.7	2.6	chr20	58890745	58890781	(5553386)	+	(CCACCG)n	Simple_repeat	1	38	(0)	2363582
16	23.9	0.0	2.4	chr20	58890782	58890822	(5553345)	+	(TG)n	Simple_repeat	1	41	(0)	2363583
206	30.7	13.8	1.2	chr20	61331199	61331363	(3112804)	+	L2a	LINE/L2	2653	2841	(578)	2367236
188	32.3	9.5	2.4	chr20	63015741	63015867	(1428300)	+	L2	LINE/L2	2520	2656	(763)	2369192
80	0.0	0.0	0.0	chr20	63015968	63016038	(1428129)	+	(CTCCCTGCCT)n	Simple_repeat	1	71	(0)	2369193
246	11.5	5.6	2.1	chr21	5227202	5227705	(41482278)	+	(TTCCT)n	Simple_repeat	1	532	(0)	2370956
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
1786	19.0	1.0	0.3	chr21	9113619	9113923	(37596060)	+	AluJb	SINE/Alu	1	307	(5)	2374250
355	21.0	6.9	0.0	chr21	9257924	9258004	(37451979)	+	MER21C	LTR/ERVL	30	116	(822)	2374357
490	25.4	1.5	5.0	chr21	9258040	9258180	(37451803)	+	MER21C	LTR/ERVL	99	234	(634)	2374357
1574	22.3	7.7	4.1	chr21	9258166	9258605	(37451378)	+	MER21C	LTR/ERVL	457	913	(25)	2374357
1850	13.3	3.4	1.1	chr21	9356048	9356332	(37353651)	C	AluSg7	SINE/Alu	(17)	292	1	2374459
12218	15.8	5.4	4.3	chr21	9356333	9357189	(37352794)	C	Tigger1	DNA/TcMar-Tigger	(786)	1632	757	2374457
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
21	16.7	0.0	2.4	chr21	9819273	9819314	(36890669)	+	(AC)n	Simple_repeat	1	42	(0)	2374898
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
42	0.0	0.0	6.3	chr21	26136161	26136223	(20573760)	+	(AAAG)n	Simple_repeat	1	63	(0)	2393553
2858	7.6	1.1	1.3	chr21	31785490	31785862	(14924121)	C	THE1C	LTR/ERVL-MaLR	(0)	375	4	2402078
39	18.8	2.4	0.0	chr21	31785866	31785948	(14924035)	+	(ACC)n	Simple_repeat	1	85	(0)	2402079
2549	15.4	5.8	2.9	chr21	36068840	36069277	(10640706)	+	LOR1a	LTR/ERV1	45	497	(0)	2409083
2130	11.9	1.3	0.0	chr21	37579027	37579320	(9130663)	C	AluSc	SINE/Alu	(10)	299	2	2411823
1274	28.2	4.6	5.9	chr21	37579321	37579542	(9130441)	C	L1MEf	LINE/L1	(5480)	1557	1119	2411822
796	18.1	0.7	0.0	chr21	39551656	39551788	(7158195)	C	MER74A	LTR/ERVL	(38)	520	387	2414790
1038	14.6	8.4	4.6	chr21	39551819	39551920	(7158063)	C	MER74A	LTR/ERVL	(333)	225	110	2414790
2334	16.5	5.4	0.7	chr21	39551921	39552359	(7157624)	C	LOR1b	LTR/ERV1	(0)	461	1	2414791
1776	14.5	0.3	1.7	chr21	44939420	44939708	(1770275)	+	AluJr	SINE/Alu	1	285	(27)	2422348
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
8118	4.3	0.0	0.7	chr21	46225021	46226027	(483956)	+	LTR13	LTR/ERVK	6	1005	(2)	2423633
12	17.7	1.2	13.1	chr21	46635981	46636063	(73920)	+	(CGCCCA)n	Simple_repeat	1	84	(0)	2424209
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1249	21.0	6.5	1.2	chr22	11896731	11897053	(38921415)	C	L1MB8	LINE/L1	(5)	6173	5833	2425507
2301	14.0	7.0	0.5	chr22	11897054	11897465	(38921003)	C	MER61C	LTR/ERV1	(0)	428	4	2425508
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
5492	25.2	7.0	0.9	chr22	11917727	11919230	(38899238)	+	MSTA-int	LTR/ERVL-MaLR	28	1631	(0)	2425534
290	22.2	1.5	0.5	chr22	11932477	11932565	(38885903)	C	L1P4	LINE/L1	(1123)	5023	4933	2425553
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
12	22.7	0.0	0.0	chr22	16718087	16718118	(34100350)	+	(CTTTC)n	Simple_repeat	1	32	(0)	2427720
4341	4.4	0.2	0.0	chr22	18890645	18891207	(31927261)	C	HSATI	Satellite	(10)	567	4	2431162
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
7558	8.4	2.6	0.5	chr22	19947258	19948243	(30870225)	C	LTR13	LTR/ERVK	(0)	1007	1	2432723
2185	11.1	0.0	1.0	chr22	23173713	23174009	(27644459)	C	AluSz	SINE/Alu	(18)	294	1	2437882
15	13.9	0.0	0.0	chr22	23174211	23174234	(27644234)	+	(GT)n	Simple_repeat	1	24	(0)	2437883
873	21.2	0.0	0.6	chr22	23174258	23174422	(27644046)	+	FRAM	SINE/Alu	1	164	(12)	2437884
482	24.8	6.7	1.9	chr22	23174528	23174683	(27643785)	+	L1MA10	LINE/L1	6171	6334	(0)	2437885
270	23.6	2.7	0.0	chr22	23898958	23899029	(26919439)	C	L1ME4b	LINE/L1	(12)	880	807	2439171
1302	19.3	8.1	1.1	chr22	23899059	23899335	(26919133)	+	LOR1b	LTR/ERV1	164	461	(0)	2439172
1870	15.1	6.1	18.2	chr22	25247901	25248225	(25570243)	+	MER65D	LTR/ERV1	155	473	(0)	2441840
1050	33.3	7.6	4.8	chr22	25248226	25248612	(25569856)	C	MER45C	DNA/hAT-Tip100	(558)	395	1	2441839
382	32.5	3.3	3.7	chr22	26360652	26360865	(24457603)	+	L2b	LINE/L2	3132	3344	(31)	2444167
25	11.8	0.0	0.0	chr22	26360884	26360920	(24457548)	+	(A)n	Simple_repeat	1	37	(0)	2444168
228	20.3	2.8	1.4	chr22	26361084	26361153	(24457315)	+	MER113B	DNA/hAT-Charlie	114	184	(118)	2444169
69	8.8	1.9	11.5	chr22	28730195	28730399	(22088069)	+	A-rich	Low_complexity	1	209	(0)	2449049
757	19.1	0.0	0.0	chr22	28730434	28730564	(22087904)	+	AluJr	SINE/Alu	1	131	(181)	2449050
321	16.5	0.0	24.8	chr22	28730565	28730575	(22087893)	+	L1M4	LINE/L1	4977	4987	(1159)	2449043
2242	10.3	0.3	0.0	chr22	28730576	28730875	(22087593)	+	AluSx	SINE/Alu	1	301	(11)	2449051
189	35.8	5.8	0.0	chr22	31148964	31149044	(19669424)	C	MIR3	SINE/MIR	(107)	101	16	2454116
210	33.3	3.6	0.0	chr22	31149268	31149348	(19669120)	+	MIR3	SINE/MIR	56	139	(69)	2454117
543	26.6	15.0	2.4	chr22	31149355	31149661	(19668807)	+	L2c	LINE/L2	2776	3134	(253)	2454118
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
1412	27.4	8.0	3.8	chr22	36052812	36053444	(14765024)	C	HAL1	LINE/L1	(685)	1822	1161	2464243
184	10.7	2.9	7.0	chr22	36053445	36053887	(14764581)	+	(CCCTT)n	Simple_repeat	1	456	(0)	2464244
2501	26.0	7.8	7.1	chr22	36053891	36053907	(14764561)	C	HAL1	LINE/L1	(1305)	1202	1188	2464245
880	16.3	0.0	0.0	chr22	36053908	36054036	(14764432)	C	FLAM_C	SINE/Alu	(11)	132	4	2464246
1585	26.7	8.7	4.4	chr22	37263909	37264479	(13553989)	C	LTR67B	LTR/ERVL	(0)	620	23	2466842
536	27.7	8.5	8.3	chr22	37264667	37264993	(13553475)	C	MLT1J	LTR/ERVL-MaLR	(73)	537	109	2466843
3356	15.3	1.4	0.6	chr22	42007530	42008083	(8810385)	C	L1MB2	LINE/L1	(138)	6033	5476	2477247
90	1.2	0.0	1.1	chr22	42008084	42008171	(8810297)	+	(TCCTT)n	Simple_repeat	1	88	(0)	2477248
1558	27.1	1.9	11.2	chr22	42008172	42008221	(8810247)	C	L1MB2	LINE/L1	(2554)	5488	5488	2477247
1840	16.2	1.8	0.3	chr22	42008222	42008504	(8809964)	C	AluSz6	SINE/Alu	(23)	289	3	2477249
593	28.8	1.4	0.0	chr22	42374675	42374813	(8443655)	+	MIR	SINE/MIR	10	150	(112)	2477914
13	14.7	0.0	3.1	chr22	42374941	42374972	(8443496)	+	(GGCAG)n	Simple_repeat	1	32	(0)	2477915
2274	8.5	2.0	0.3	chr22	42857684	42857978	(7960490)	C	AluSx	SINE/Alu	(11)	301	2	2479093
1574	20.6	3.6	8.5	chr22	47093729	47093831	(3724637)	+	MLT2D	LTR/ERVL	1	104	(310)	2486424
1978	16.8	7.2	11.8	chr22	47093832	47094316	(3724152)	C	LOR1b	LTR/ERV1	(0)	461	1	2486425
1677	19.7	9.2	0.7	chr3	7267533	7267952	(191027607)	C	LOR1b	LTR/ERV1	(2)	459	1	2503526
2122	17.5	6.6	0.0	chr3	11064510	11064904	(187230655)	+	LOR1b	LTR/ERV1	1	423	(38)	2510687
13147	19.4	11.7	10.4	chr3	11064905	11065136	(187230423)	+	LOR1-int	LTR/ERV1	32	267	(7853)	2510687
266	32.1	11.4	3.1	chr3	11493620	11493812	(186801747)	+	L3b	LINE/CR1	4389	4599	(633)	2511552
360	32.1	6.3	10.2	chr3	11493934	11494037	(186801522)	+	L3	LINE/CR1	3683	3788	(311)	2511553
3318	10.2	3.6	0.6	chr3	11494038	11494519	(186801040)	C	LOR1a	LTR/ERV1	(0)	497	1	2511554
2017	19.5	6.7	2.3	chr3	11597419	11597858	(186697701)	+	LOR1b	LTR/ERV1	1	461	(0)	2511723
2050	12.9	0.7	1.4	chr3	11598032	11598326	(186697233)	C	AluSx3	SINE/Alu	(18)	293	1	2511724
125	4.9	5.0	1.9	chr3	30399766	30399966	(167895593)	+	(AAAGG)n	Simple_repeat	1	211	(0)	2540486
239	24.6	1.7	0.0	chr3	30399976	30400032	(167895527)	C	MLT1I	LTR/ERVL-MaLR	(234)	177	120	2540481
1131	22.9	10.1	2.2	chr3	30400106	30400422	(167895137)	+	MER2	DNA/TcMar-Tigger	1	345	(0)	2540487
349	28.6	15.0	7.4	chr3	38450722	38450936	(159844623)	C	L2	LINE/L2	(593)	2826	2593	2553063
2158	16.5	1.7	4.4	chr3	38450950	38451362	(159844197)	C	LOR1b	LTR/ERV1	(0)	461	60	2553064
22	21.4	0.0	4.6	chr3	40309721	40309785	(157985774)	+	(CCT)n	Simple_repeat	1	65	(0)	2555737
5831	11.8	1.2	3.0	chr3	40474938	40475206	(157820353)	C	MER4D1	LTR/ERV1	(0)	900	637	2556059
58	1.6	0.0	3.0	chr3	40475207	40475272	(157820287)	+	(TTTCC)n	Simple_repeat	1	66	(0)	2556060
5831	11.8	1.2	3.0	chr3	40475273	40475313	(157820246)	C	MER4D1	LTR/ERV1	(264)	636	605	2556059
2706	4.3	0.0	0.0	chr3	40475314	40475617	(157819942)	+	AluY	SINE/Alu	1	304	(7)	2556061
1718	19.4	1.0	1.0	chr3	41601912	41602204	(156693355)	+	AluJr4	SINE/Alu	1	293	(19)	2557689
42	29.7	7.9	1.7	chr3	41602207	41602473	(156693086)	+	GA-rich	Low_complexity	1	288	(0)	2557690
539	22.8	3.2	0.0	chr3	41602486	41602634	(156692925)	+	L1MD3	LINE/L1	7842	7995	(0)	2557691
8028	6.1	0.6	0.2	chr3	41695675	41696677	(156598882)	+	LTR13	LTR/ERVK	1	1007	(0)	2557815
2215	17.8	1.2	0.2	chr3	41940030	41940446	(156355113)	+	LOR1b	LTR/ERV1	41	461	(0)	2558200
1127	19.6	2.3	2.3	chr3	41940455	41940674	(156354885)	+	AluJo	SINE/Alu	84	303	(9)	2558201
2291	14.3	11.7	0.2	chr3	49215539	49215946	(149079613)	C	LOR1b	LTR/ERV1	(0)	461	1	2570852
27	0.0	0.0	0.0	chr3	50675445	50675470	(147620089)	+	(GGTGCG)n	Simple_repeat	1	26	(0)	2573384
4876	15.5	8.2	2.6	chr3	56126291	56126493	(142169066)	+	L1M2	LINE/L1	3825	4017	(2126)	2581545
1561	20.8	2.7	0.7	chr3	56126494	56126781	(142168778)	+	AluJr	SINE/Alu	19	312	(0)	2581546
4876	15.5	8.2	2.6	chr3	56126782	56127445	(142168114)	+	L1M2	LINE/L1	4018	4764	(1379)	2581545
3354	11.4	1.6	0.2	chr3	56438050	56438539	(141857020)	+	LOR1a	LTR/ERV1	1	497	(0)	2582127
313	21.1	6.9	4.0	chr3	56438540	56438572	(141856987)	+	L1ME4a	LINE/L1	6091	6120	(4)	2582126
3128	19.4	9.6	6.9	chr3	60513699	60514479	(137781080)	+	LTR1E	LTR/ERV1	1	804	(0)	2589118
1787	10.5	3.9	2.6	chr3	60514480	60514665	(137780894)	+	L1PA10	LINE/L1	5983	6168	(0)	2589117
1865	16.2	0.3	1.4	chr3	69792999	69793315	(128502244)	C	AluJb	SINE/Alu	(0)	312	1	2604814
812	23.0	1.8	14.1	chr3	69793383	69793630	(128501929)	C	MER20	DNA/hAT-Charlie	(1)	218	2	2604815
308	15.5	3.4	4.9	chr3	70211150	70211926	(128083633)	+	(TTCCT)n	Simple_repeat	1	803	(0)	2605484
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
6240	11.6	6.7	3.5	chr3	75677114	75677995	(122617564)	C	MER57A-int	LTR/ERV1	(3755)	2432	1495	2614566
3047	13.5	3.5	0.2	chr3	82593062	82593537	(115702022)	+	LOR1a	LTR/ERV1	4	495	(2)	2623587
2820	12.6	4.5	2.4	chr3	82593538	82593552	(115702007)	+	MER49	LTR/ERV1	496	507	(416)	2623586
2351	12.2	0.0	0.0	chr3	89614863	89615173	(108680386)	+	AluSc8	SINE/Alu	1	311	(0)	2632246
125	3.7	7.0	0.9	chr3	89615174	89615372	(108680187)	+	(GAAAG)n	Simple_repeat	1	213	(0)	2632247
785	32.6	3.2	0.0	chr3	89615374	89615646	(108679913)	C	MamGypLTR3a	LTR/Gypsy	(636)	345	64	2632245
1482	20.4	3.0	2.0	chr3	103722587	103722885	(94572674)	+	AluJr	SINE/Alu	2	303	(9)	2646161
319	23.0	5.4	1.1	chr3	103722886	103722908	(94572651)	+	L1MD1	LINE/L1	4384	4411	(1735)	2646160
108	5.2	4.9	0.6	chr3	103722913	103723076	(94572483)	+	(AAAGG)n	Simple_repeat	1	172	(0)	2646162
1023	23.4	4.9	1.0	chr3	103723110	103723420	(94572139)	+	L1MD1	LINE/L1	4408	4731	(1415)	2646160
3182	12.9	1.6	3.0	chr3	104756006	104756500	(93539059)	C	LOR1a	LTR/ERV1	(0)	497	10	2647355
1874	18.1	12.4	1.0	chr3	108601685	108602092	(89693467)	+	LOR1b	LTR/ERV1	1	461	(0)	2652533
12	24.4	3.2	4.6	chr3	115784294	115784356	(82511203)	+	G-rich	Low_complexity	1	65	(0)	2662585
23	28.4	2.0	3.0	chr3	115784357	115784388	(82511171)	+	(GCGG)n	Simple_repeat	5	101	(0)	2662586
18	11.4	0.0	6.8	chr3	125990346	125990389	(72305170)	+	(GCCCC)n	Simple_repeat	1	44	(0)	2677991
671	27.2	11.6	1.2	chr3	126204785	126205130	(72090429)	C	L2a	LINE/L2	(0)	3426	3040	2678248
322	27.5	5.7	6.9	chr3	127628620	127628779	(70666780)	C	MIR3	SINE/MIR	(45)	163	6	2680396
1981	15.4	14.1	0.8	chr3	131200511	131200909	(67094650)	+	LOR1b	LTR/ERV1	1	461	(0)	2686548
2009	25.3	8.3	4.5	chr3	131200910	131201181	(67094378)	+	L1ME3B	LINE/L1	5674	5969	(273)	2686547
7158	11.5	1.9	2.5	chr3	134224035	134225047	(64070512)	C	LTR13	LTR/ERVK	(0)	1007	1	2691097
20	3.2	2.9	2.9	chr3	138890232	138890265	(59405294)	+	(TTCT)n	Simple_repeat	1	35	(0)	2698437
53	2.4	9.4	0.0	chr3	138890266	138890350	(59405209)	+	(CCTTG)n	Simple_repeat	1	93	(0)	2698438
102	3.4	1.6	2.3	chr3	138890352	138890479	(59405080)	+	(CTTT)n	Simple_repeat	1	130	(0)	2698439
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
809	31.9	12.5	2.5	chr3	151105327	151106208	(47189351)	+	L2c	LINE/L2	1857	2839	(580)	2716363
60	6.0	5.3	3.4	chr3	151106212	151106308	(47189251)	+	(TTTTCC)n	Simple_repeat	1	98	(0)	2716364
40	0.0	0.0	0.0	chr3	151106309	151106345	(47189214)	+	(CTCCC)n	Simple_repeat	1	37	(0)	2716365
60	6.0	5.3	3.4	chr3	151106346	151106360	(47189199)	+	(TTTTCC)n	Simple_repeat	3	19	(0)	2716366
704	19.5	0.0	0.0	chr3	151106361	151106473	(47189086)	C	AluJr	SINE/Alu	(199)	113	1	2716367
1740	16.7	0.4	0.8	chr3	155785759	155786015	(42509544)	+	AluJb	SINE/Alu	3	258	(54)	2723003
44	11.7	4.4	7.8	chr3	155786021	155786155	(42509404)	+	A-rich	Low_complexity	1	141	(0)	2723004
9243	18.7	2.7	5.4	chr3	155786157	155786544	(42509015)	+	L1M4c	LINE/L1	3264	3646	(2730)	2722995
1719	17.6	0.9	8.4	chr3	156070252	156070610	(42224949)	+	Tigger3a	DNA/TcMar-Tigger	3	334	(14)	2723523
2470	14.0	7.2	1.4	chr3	156070611	156071015	(42224544)	C	LOR1b	LTR/ERV1	(0)	461	27	2723524
18	16.6	1.6	7.8	chr3	156817017	156817079	(41478480)	+	(GCG)n	Simple_repeat	1	64	(0)	2724606
3590	9.1	1.8	0.0	chr3	161118496	161118991	(37176568)	+	L1P3	LINE/L1	3719	4223	(1923)	2730855
4858	12.4	0.5	1.6	chr3	161118995	161119859	(37175700)	+	THE1D-int	LTR/ERVL-MaLR	809	1651	(0)	2730856
13	22.0	2.3	2.2	chr3	165196417	165196432	(33099127)	+	(GAGCGG)n	Simple_repeat	1	44	(0)	2735883
16	16.9	0.0	0.0	chr3	165196433	165196459	(33099100)	+	G-rich	Low_complexity	1	27	(0)	2735884
16	0.0	0.0	0.0	chr3	165196492	165196511	(33099048)	+	(GCG)n	Simple_repeat	1	20	(0)	2735885
99	5.4	0.9	0.0	chr3	165196874	165196988	(33098571)	+	(TC)n	Simple_repeat	1	116	(0)	2735886
22	30.2	4.0	1.7	chr3	165498796	165498855	(32796704)	+	GA-rich	Low_complexity	1	61	(0)	2736319
162	0.0	0.0	0.0	chr3	165498856	165498995	(32796564)	+	(AAGGA)n	Simple_repeat	1	140	(0)	2736320
22	26.6	1.2	3.7	chr3	165498996	165499051	(32796508)	+	GA-rich	Low_complexity	25	78	(0)	2736321
973	24.3	13.9	2.6	chr3	165499169	165499581	(32795978)	+	L1ME1	LINE/L1	5409	5844	(335)	2736322
68	2.8	9.1	0.0	chr3	169056452	169056561	(29238998)	+	(GAAAG)n	Simple_repeat	1	120	(0)	2740879
458	25.2	1.9	0.0	chr3	169056573	169056675	(29238884)	C	L2a	LINE/L2	(18)	3408	3304	2740880
929	10.1	0.0	0.0	chr3	169472066	169472203	(28823356)	+	L1MA3	LINE/L1	6168	6305	(0)	2741354
693	12.8	0.0	0.0	chr3	169472303	169472396	(28823163)	+	FLAM_A	SINE/Alu	38	131	(11)	2741355
230	11.1	2.4	0.3	chr3	169472403	169472774	(28822785)	+	(AGGAA)n	Simple_repeat	1	381	(0)	2741356
3111	11.1	4.2	0.6	chr3	174448549	174449027	(23846532)	C	LOR1a	LTR/ERV1	(0)	497	1	2749001
2158	15.5	7.8	3.9	chr3	191271227	191271518	(7024041)	+	LOR1b	LTR/ERV1	153	461	(0)	2776294
1188	31.8	8.0	6.2	chr3	191271519	191271907	(7023652)	+	L2	LINE/L2	2067	2451	(968)	2776293
1117	14.5	4.8	0.0	chr3	196811387	196811545	(1484014)	C	AluSx	SINE/Alu	(9)	303	137	2785807
6341	11.7	5.1	2.0	chr4	1729264	1730031	(188484524)	C	LTR13	LTR/ERVK	(0)	1007	209	2790543
2344	7.2	1.0	0.7	chr4	1730032	1730335	(188484220)	C	AluY	SINE/Alu	(5)	306	2	2790544
6799	11.5	1.9	2.3	chr4	1912900	1913910	(188300645)	+	LTR13	LTR/ERVK	1	1007	(0)	2790820
3026	22.1	5.1	2.2	chr4	2132187	2132949	(188081606)	+	L1MEf	LINE/L1	898	1678	(4522)	2791131
57	1.9	0.0	0.0	chr4	6414071	6414123	(183800432)	+	(TG)n	Simple_repeat	1	53	(0)	2798329
15	12.9	9.3	0.0	chr4	6414185	6414227	(183800328)	+	(GCTGGA)n	Simple_repeat	1	47	(0)	2798330
1507	23.1	14.8	1.6	chr4	18075839	18076383	(172138172)	+	LTR50	LTR/ERVL	1	629	(166)	2817339
2019	17.9	5.9	0.5	chr4	32290216	32290578	(157923977)	C	LOR1b	LTR/ERV1	(0)	461	78	2839283
1685	19.2	0.6	2.8	chr4	32290579	32290895	(157923660)	C	AluJo	SINE/Alu	(2)	310	1	2839284
1371	18.1	5.0	2.6	chr4	38255284	38255677	(151958878)	+	L1ME1	LINE/L1	5016	5425	(754)	2847473
2030	15.8	7.1	5.1	chr4	38255680	38256039	(151958516)	C	LOR1b	LTR/ERV1	(39)	422	49	2847474
874	16.8	0.0	0.0	chr4	38256040	38256164	(151958391)	+	AluJr4	SINE/Alu	1	125	(187)	2847475
3423	11.3	0.6	1.2	chr4	40996843	40997342	(149217213)	+	LOR1a	LTR/ERV1	1	497	(0)	2853258
2603	17.4	3.9	1.1	chr4	41026810	41027257	(149187298)	+	LOR1b	LTR/ERV1	1	461	(0)	2853310
3318	17.5	6.0	6.4	chr4	41027258	41027364	(149187191)	C	L1MB7	LINE/L1	(517)	5667	5600	2853306
15	9.7	0.0	0.0	chr4	42656757	42656778	(147557777)	+	(AC)n	Simple_repeat	1	22	(0)	2855919
12	19.1	5.9	3.7	chr4	42656945	42656995	(147557560)	+	(CCGCG)n	Simple_repeat	1	54	(0)	2855920
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
7847	20.4	6.1	2.5	chr4	49268140	49270555	(140944000)	+	L1M4	LINE/L1	3095	5610	(570)	2865041
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
1130	13.8	0.3	0.1	chr4	49514156	49515857	(140698698)	+	ACRO1	Satellite/acro	1	1705	(0)	2865184
406	18.9	2.2	0.5	chr4	49573746	49573848	(140640707)	+	MSTA	LTR/ERVL-MaLR	4	113	(262)	2865274
271	21.9	1.9	0.4	chr4	49573937	49574021	(140640534)	+	THE1D-int	LTR/ERVL-MaLR	959	1064	(587)	2865275
839	22.6	15.8	2.1	chr4	49573984	49574223	(140640332)	C	THE1D-int	LTR/ERVL-MaLR	(398)	1233	955	2865276
867	26.6	5.5	4.6	chr4	49574228	49574534	(140640021)	+	MSTA	LTR/ERVL-MaLR	76	385	(43)	2865274
1644	20.4	21.1	1.2	chr4	58255260	58255933	(131958622)	+	L1MC3	LINE/L1	5460	6275	(1510)	2875577
2139	16.9	2.6	5.5	chr4	58255934	58256370	(131958185)	+	LOR1b	LTR/ERV1	1	424	(37)	2875578
2273	22.7	3.9	1.2	chr4	58256429	58256998	(131957557)	+	L1MC3	LINE/L1	6283	6868	(917)	2875577
1557	18.9	16.1	4.2	chr4	63418518	63418921	(126795634)	+	LOR1b	LTR/ERV1	1	461	(0)	2881984
1285	28.5	8.2	5.3	chr4	63418922	63419056	(126795499)	+	L1ME3A	LINE/L1	6005	6138	(35)	2881981
1944	20.3	5.9	1.8	chr4	63832869	63833304	(126381251)	+	LOR1b	LTR/ERV1	1	455	(6)	2882472
201	26.7	12.2	4.6	chr4	63833332	63833504	(126381051)	C	L3	LINE/CR1	(2107)	1992	1805	2882473
3238	10.8	1.1	0.4	chr4	66801676	66802147	(123412408)	+	MER39B	LTR/ERV1	3	477	(176)	2886065
2063	20.7	2.3	0.7	chr4	66802148	66802570	(123411985)	C	LOR1b	LTR/ERV1	(0)	461	32	2886066
12	17.7	3.1	0.0	chr4	70902282	70902313	(119312242)	+	(CCTCC)n	Simple_repeat	1	33	(0)	2891446
12	20.4	5.6	3.5	chr4	70902418	70902471	(119312084)	+	(CTCCTGT)n	Simple_repeat	1	57	(0)	2891447
159	10.8	1.0	5.4	chr4	73636544	73636853	(116577702)	+	A-rich	Low_complexity	1	313	(0)	2895150
6185	15.7	2.2	1.4	chr4	73636854	73638843	(116575712)	+	L1PB3	LINE/L1	4921	6923	(0)	2895149
35	22.0	4.7	4.5	chr4	80015696	80015834	(110198721)	+	GA-rich	Low_complexity	1	140	(0)	2904278
168	1.2	1.2	1.2	chr4	80015835	80016004	(110198551)	+	(AAGGA)n	Simple_repeat	1	172	(0)	2904279
303	27.7	2.5	0.0	chr4	80016048	80016166	(110198389)	C	Charlie18a	DNA/hAT-Charlie	(152)	190	69	2904280
3234	13.8	0.6	0.6	chr4	83369736	83370232	(106844323)	C	LOR1a	LTR/ERV1	(0)	497	1	2909396
1774	17.4	11.3	6.0	chr4	87255622	87256056	(102958499)	+	LOR1b	LTR/ERV1	1	461	(0)	2915174
11421	9.9	0.6	0.6	chr4	89849631	89851209	(100363346)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2919213
2563	18.0	1.6	4.5	chr4	96876293	96876670	(93337885)	C	LOR1a	LTR/ERV1	(0)	497	135	2928220
762	21.5	7.6	0.8	chr4	102228220	102228659	(87985896)	+	MER34	LTR/ERV1	12	571	(0)	2935399
2392	18.8	1.0	0.0	chr4	102228699	102229102	(87985453)	C	LOR1b	LTR/ERV1	(0)	461	54	2935400
15325	19.3	3.9	1.9	chr4	102704964	102709038	(87505517)	+	L1MA6	LINE/L1	719	4868	(2697)	2936033
827	11.8	3.5	0.0	chr4	102709039	102709148	(87505407)	+	AluJr	SINE/Alu	1	114	(198)	2936034
115	19.9	1.7	4.2	chr4	102709151	102709451	(87505104)	+	A-rich	Low_complexity	1	306	(0)	2936035
2425	17.1	4.8	1.4	chr4	112212236	112212652	(78001903)	C	LOR1b	LTR/ERV1	(0)	461	27	2948863
2334	11.2	0.6	0.0	chr4	121575278	121575588	(68638967)	+	AluSq	SINE/Alu	1	313	(0)	2961233
85	7.3	3.0	0.7	chr4	121575589	121575672	(68638883)	+	(GGAAA)n	Simple_repeat	1	85	(0)	2961234
38	8.0	0.0	0.0	chr4	121575673	121575726	(68638829)	+	(GGCAAGGCAG)n	Simple_repeat	1	54	(0)	2961235
85	7.3	3.0	0.7	chr4	121575727	121575776	(68638779)	+	(GGAAA)n	Simple_repeat	1	52	(0)	2961236
598	29.8	6.2	0.4	chr4	121575787	121576015	(68638540)	C	L2	LINE/L2	(1035)	2384	2142	2961232
2026	16.4	10.0	0.9	chr4	125006738	125007156	(65207399)	+	LOR1b	LTR/ERV1	1	461	(0)	2966030
896	27.7	10.3	1.1	chr4	128427436	128427796	(61786759)	C	LTR86A1	LTR/ERVL	(0)	513	116	2970720
2031	21.3	12.0	2.9	chr4	128427837	128428417	(61786138)	+	LTR41	LTR/ERVL	10	650	(118)	2970721
5977	11.6	1.7	0.2	chr4	128428420	128430183	(61784372)	C	L1PA15	LINE/L1	(0)	6165	4372	2970722
485	28.3	2.7	0.7	chr4	128513905	128514050	(61700505)	+	LTR107_Mam	LTR	419	567	(3)	2970828
377	20.6	3.8	8.7	chr4	128514058	128514138	(61700417)	C	L1MEi	LINE/L1	(657)	1555	1481	2970829
1690	18.6	9.6	2.2	chr4	128514139	128514495	(61700060)	+	MLT1B	LTR/ERVL-MaLR	5	390	(0)	2970830
377	20.6	3.8	8.7	chr4	128514496	128514551	(61700004)	C	L1MEi	LINE/L1	(732)	1480	1425	2970829
29271	13.4	4.8	4.4	chr4	136746992	136749585	(53464970)	C	LOR1-int	LTR/ERV1	(5539)	2581	1	2980829
1986	18.2	6.0	1.6	chr4	136749586	136749969	(53464586)	C	LOR1b	LTR/ERV1	(0)	461	60	2980829
32	22.3	0.0	1.2	chr4	139084411	139084490	(51130065)	+	(CGGCGG)n	Simple_repeat	1	80	(0)	2983898
21017	11.1	3.9	1.6	chr4	143429404	143432009	(46782546)	C	MER61-int	LTR/ERV1	(1691)	3526	407	2990318
390	8.3	20.0	2.3	chr4	143432021	143432106	(46782449)	C	MER61-int	LTR/ERV1	(4763)	454	350	2990318
924	17.9	7.3	4.5	chr4	143432157	143432355	(46782200)	C	MER61-int	LTR/ERV1	(5012)	205	1	2990318
968	16.9	9.8	4.9	chr4	143432356	143432579	(46781976)	C	MER61B	LTR/ERV1	(0)	427	192	2990318
370	4.7	1.1	3.5	chr4	150805169	150805712	(39408843)	+	(AAAGG)n	Simple_repeat	1	550	(0)	3000282
344	32.8	12.4	1.2	chr4	150805713	150805968	(39408587)	C	L3	LINE/CR1	(376)	3723	3435	3000283
3482	11.4	0.8	0.2	chr4	151977505	151977998	(38236557)	C	LOR1a	LTR/ERV1	(0)	497	1	3002260
233	35.4	3.2	4.2	chr4	153241401	153241589	(36972966)	C	L2c	LINE/L2	(77)	3310	3124	3004287
14	10.8	2.0	10.0	chr4	153241606	153241654	(36972901)	+	(CAGGAG)n	Simple_repeat	1	50	(0)	3004288
423	35.8	2.2	4.0	chr4	155521402	155521477	(34693078)	+	L2b	LINE/L2	2852	2925	(494)	3007538
2165	18.4	4.6	1.4	chr4	155521478	155521923	(34692632)	C	LOR1b	LTR/ERV1	(0)	461	1	3007539
13	9.4	0.0	11.6	chr4	159024520	159024562	(31189993)	+	A-rich	Low_complexity	1	43	(0)	3012251
2505	24.4	4.8	4.9	chr4	159747818	159748767	(30465788)	C	L1M3e	LINE/L1	(6338)	692	7	3013311
837	16.2	2.4	0.0	chr4	159748781	159748940	(30465615)	C	L1MA9	LINE/L1	(940)	6619	6456	3013308
58	38.5	3.0	3.6	chr4	159748960	159749366	(30465189)	+	(TCTTT)n	Simple_repeat	1	419	(0)	3013312
2888	14.8	2.2	0.2	chr4	164140260	164140746	(26073809)	+	LOR1a	LTR/ERV1	1	497	(0)	3018998
60	24.2	0.0	2.1	chr4	164140747	164140785	(26073770)	+	(CA)n	Simple_repeat	1	39	(0)	3018999
4488	21.1	3.8	1.9	chr4	166502018	166503223	(23711332)	C	L1PA17	LINE/L1	(5558)	1315	2	3022460
15	20.5	3.5	8.0	chr4	173168705	173168789	(17045766)	+	G-rich	Low_complexity	1	88	(0)	3031238
1081	23.4	6.1	10.1	chr4	183748500	183748560	(6465995)	+	LTR16C	LTR/ERVL	99	160	(329)	3045541
2360	16.7	3.7	3.3	chr4	183748561	183749019	(6465536)	C	LOR1b	LTR/ERV1	(0)	461	1	3045542
1369	18.3	0.4	0.8	chr4	184483786	184484022	(5730533)	+	AluJb	SINE/Alu	7	242	(70)	3046644
2450	16.6	3.3	1.8	chr4	184484024	184484472	(5730083)	C	LOR1b	LTR/ERV1	(5)	456	1	3046645
6566	23.7	9.0	2.2	chr4	184518449	184518576	(5695979)	C	L1ME1	LINE/L1	(1110)	5036	4918	3046711
2469	16.8	4.1	0.5	chr4	184518577	184519018	(5695537)	+	LOR1b	LTR/ERV1	1	459	(2)	3046715
6566	23.7	9.0	2.2	chr4	184519019	184520055	(5694500)	C	L1ME1	LINE/L1	(1229)	4917	3765	3046711
1723	15.4	7.5	0.3	chr4	184537728	184538047	(5676508)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	3046749
497	28.3	13.7	8.9	chr4	184538048	184538241	(5676314)	+	L1M6	LINE/L1	614	815	(5681)	3046748
241	29.5	8.3	0.8	chr4	184538261	184538383	(5676172)	+	L1M6	LINE/L1	896	1028	(5468)	3046748
1898	11.1	2.3	0.0	chr4	186489676	186489927	(3724628)	C	AluSx4	SINE/Alu	(52)	258	1	3049735
1632	16.6	8.8	3.1	chr4	186489928	186490142	(3724413)	+	LOR1b	LTR/ERV1	237	460	(1)	3049734
864	17.4	0.0	0.0	chr4	186490167	186490298	(3724257)	C	FLAM_C	SINE/Alu	(11)	132	1	3049736
1991	18.9	7.2	1.1	chr4	186993209	186993641	(3220914)	+	LOR1b	LTR/ERV1	1	461	(0)	3050409
993	30.6	4.7	7.4	chr4	187855737	187856003	(2358552)	C	L2a	LINE/L2	(0)	3426	3184	3051563
2387	17.4	3.0	0.7	chr4	187856004	187856453	(2358102)	C	LOR1b	LTR/ERV1	(0)	461	1	3051564
2328	16.6	1.0	0.7	chr4	188463801	188464214	(1750341)	+	LOR1b	LTR/ERV1	45	459	(2)	3052645
956	17.5	5.8	0.9	chr4	188464217	188464446	(1750109)	+	L1MB3	LINE/L1	5914	6155	(28)	3052644
2311	18.8	3.0	0.2	chr4	188721065	188721512	(1493043)	C	LOR1b	LTR/ERV1	(0)	461	1	3053013
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
4747	18.1	7.3	9.6	chr4	190119764	190122447	(92108)	+	TAR1	Satellite/telo	1	2622	(566)	3054643
543	5.4	1.2	0.9	chr4	190122449	190123118	(91437)	+	(AGGGTT)n	Simple_repeat	1	678	(0)	3054644
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
1095	10.4	0.7	0.9	chr4	190180974	190182175	(32380)	+	BSR/Beta	Satellite	1	1199	(0)	3054653
2576	14.0	6.0	0.2	chr5	8192758	8193201	(173345058)	C	LOR1a	LTR/ERV1	(8)	489	19	3064058
290	5.4	3.6	0.2	chr5	9353018	9353428	(172184831)	+	(GAAAG)n	Simple_repeat	1	426	(0)	3065407
2026	18.2	8.1	0.5	chr5	25872368	25872791	(155665468)	+	LOR1b	LTR/ERV1	1	459	(2)	3087872
13398	15.3	4.3	2.5	chr5	25872792	25872978	(155665281)	C	L1MA3	LINE/L1	(4758)	2807	2638	3087867
1843	18.2	2.2	1.4	chr5	35847263	35847794	(145690465)	C	LOR1-int	LTR/ERV1	(7704)	416	1	3101969
1580	14.2	1.2	0.0	chr5	35847795	35848047	(145690212)	C	LOR1b	LTR/ERV1	(0)	461	206	3101969
13	20.5	5.8	1.8	chr5	40797717	40797768	(140740491)	+	(CGCCCGC)n	Simple_repeat	1	55	(0)	3109433
19	23.3	1.4	5.4	chr5	40798198	40798270	(140739989)	+	G-rich	Low_complexity	1	74	(0)	3109434
162	2.2	1.5	3.5	chr5	53172247	53172446	(128365813)	+	(TTTCC)n	Simple_repeat	1	203	(0)	3119925
2004	12.8	0.4	0.0	chr5	53172447	53172720	(128365539)	C	AluSq2	SINE/Alu	(38)	275	1	3119926
238	31.6	2.5	1.2	chr5	61441538	61441617	(120096642)	C	MIR3	SINE/MIR	(28)	180	100	3132282
3035	12.4	0.0	0.6	chr5	61441850	61442329	(120095930)	C	LOR1a	LTR/ERV1	(19)	478	2	3132283
31	18.8	0.0	0.0	chr5	67281991	67282053	(114256206)	+	(CCCTTCC)n	Simple_repeat	1	63	(0)	3140611
23	26.6	5.0	4.0	chr5	67282054	67282107	(114256152)	+	(TTTCCTT)n	Simple_repeat	3	125	(0)	3140612
382	28.3	5.5	1.7	chr5	69189834	69190009	(112348250)	+	MIRb	SINE/MIR	45	227	(41)	3143460
310	24.3	16.4	1.3	chr5	69433996	69434145	(112104114)	C	LTR33	LTR/ERVL	(4)	511	335	3144025
1934	16.3	1.7	0.0	chr5	69434182	69434475	(112103784)	+	AluJb	SINE/Alu	1	299	(13)	3144026
91	18.6	2.6	3.4	chr5	73828576	73828805	(107709454)	+	(TTTC)n	Simple_repeat	1	236	(0)	3151128
2050	15.6	0.0	1.9	chr5	73828807	73829121	(107709138)	C	AluJb	SINE/Alu	(2)	310	2	3151129
333	10.2	0.0	0.0	chr5	77029140	77029188	(104509071)	+	MER72	LTR/ERV1	1	49	(719)	3156069
2987	13.3	0.0	0.4	chr5	77029186	77029652	(104508607)	C	LOR1a	LTR/ERV1	(32)	465	1	3156070
2609	5.3	0.3	0.0	chr5	79179891	79180194	(102358065)	+	AluY	SINE/Alu	1	305	(6)	3159247
1376	10.5	0.0	0.0	chr5	79180198	79180378	(102357881)	+	AluYh3	SINE/Alu	128	308	(3)	3159248
116	22.6	0.4	0.0	chr5	79180379	79180620	(102357639)	+	A-rich	Low_complexity	1	243	(0)	3159249
1691	14.4	1.1	0.0	chr5	79180621	79180890	(102357369)	+	L1PREC2	LINE/L1	5888	6160	(0)	3159250
20	15.9	5.1	6.0	chr5	79514225	79514303	(102023956)	+	(GCCGCGG)n	Simple_repeat	1	83	(0)	3159873
2003	14.5	0.0	1.4	chr5	80242774	80242926	(101295333)	+	AluSz	SINE/Alu	137	286	(26)	3161147
1283	14.9	0.0	0.5	chr5	80242932	80243133	(101295126)	+	LOR1a	LTR/ERV1	297	497	(0)	3161149
445	22.7	1.8	1.8	chr5	80243173	80243284	(101294975)	+	LTR67B	LTR/ERVL	502	613	(7)	3161150
1580	5.8	0.0	0.0	chr5	81792014	81792187	(99746072)	+	AluYc	SINE/Alu	124	297	(2)	3163628
19	16.2	1.5	7.6	chr5	83474233	83474297	(98063962)	+	G-rich	Low_complexity	1	66	(0)	3166016
3091	19.3	0.2	0.0	chr5	86464713	86465251	(95073008)	+	HERVE-int	LTR/ERV1	6356	6895	(1)	3169823
2371	17.6	3.2	1.8	chr5	86465252	86465707	(95072552)	+	LTR2	LTR/ERV1	1	463	(0)	3169823
1683	10.5	4.4	0.0	chr5	86465708	86465945	(95072314)	+	HERVL-int	LTR/ERVL	4863	5111	(543)	3169824
15	24.4	2.9	4.3	chr5	88883183	88883250	(92655009)	+	(GCGA)n	Simple_repeat	1	70	(0)	3172895
22	29.9	1.4	0.0	chr5	88883219	88883287	(92654972)	+	(GC)n	Simple_repeat	1	70	(0)	3172896
42	7.2	0.0	1.6	chr5	88883299	88883360	(92654899)	+	(GGA)n	Simple_repeat	1	62	(0)	3172897
18	0.0	0.0	0.0	chr5	92420208	92420242	(89118017)	+	(AT)n	Simple_repeat	1	35	(0)	3177445
2889	15.6	1.6	0.2	chr5	92420375	92420862	(89117397)	C	LOR1a	LTR/ERV1	(2)	495	1	3177446
1086	16.0	0.0	0.0	chr5	93873146	93873301	(87664958)	+	AluJo	SINE/Alu	137	292	(20)	3179173
97	5.6	2.4	4.7	chr5	93873310	93873479	(87664780)	+	(GGAAA)n	Simple_repeat	1	166	(0)	3179174
2246	16.6	9.9	0.7	chr5	101520267	101520715	(80017544)	+	LOR1a	LTR/ERV1	1	495	(2)	3189001
1977	19.8	0.3	2.1	chr5	103772338	103772724	(77765535)	C	LOR1b	LTR/ERV1	(0)	461	82	3191897
1427	13.1	1.3	0.5	chr5	103772693	103772915	(77765344)	+	MER50	LTR/ERV1	487	711	(23)	3191898
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
3191	14.9	0.0	1.0	chr5	107170740	107171241	(74367018)	C	LOR1a	LTR/ERV1	(0)	497	1	3196022
12	12.5	0.0	3.6	chr5	113330679	113330706	(68207553)	+	A-rich	Low_complexity	1	28	(0)	3204132
9358	16.3	2.0	1.8	chr5	113364261	113365621	(68172638)	C	MSTA-int	LTR/ERVL-MaLR	(272)	1359	1	3204182
1910	9.7	0.0	0.0	chr5	120147080	120147348	(61390911)	+	L1PA13	LINE/L1	5894	6162	(1)	3213178
24	3.1	0.0	0.0	chr5	120147353	120147385	(61390874)	+	(ACCCTC)n	Simple_repeat	1	33	(0)	3213179
10227	4.5	4.2	2.6	chr5	120147386	120148746	(61389513)	+	SVA_C	Retroposon/SVA	1	1384	(0)	3213180
445	28.9	11.7	2.9	chr5	120365539	120365780	(61172479)	C	MER76	LTR/ERVL	(58)	633	368	3213433
1590	17.4	3.5	0.0	chr5	120365860	120366135	(61172124)	C	LOR1b	LTR/ERV1	(0)	461	176	3213434
12	14.3	4.8	4.5	chr5	135034096	135034137	(46504122)	+	(GCTCAGC)n	Simple_repeat	1	44	(0)	3233795
28	3.3	0.0	0.0	chr5	135034145	135034175	(46504084)	+	(CCGGCT)n	Simple_repeat	1	31	(0)	3233796
17	21.6	0.0	3.1	chr5	135034273	135034345	(46503914)	+	G-rich	Low_complexity	1	70	(0)	3233797
32	25.7	0.8	5.9	chr5	135034349	135034490	(46503769)	+	(CCCGC)n	Simple_repeat	1	134	(0)	3233798
13	26.1	0.0	0.0	chr5	135034704	135034744	(46503515)	+	G-rich	Low_complexity	1	41	(0)	3233799
778	28.1	4.2	5.0	chr5	135560576	135560815	(45977444)	C	MIRb	SINE/MIR	(30)	238	1	3234473
614	28.5	10.3	4.1	chr5	140373289	140373559	(41164700)	C	L2b	LINE/L2	(0)	3375	3086	3242476
12	20.5	2.9	0.0	chr5	142551952	142551985	(38986274)	+	(CCTCC)n	Simple_repeat	1	35	(0)	3246224
2137	10.4	0.0	2.8	chr5	144009908	144010196	(37528063)	C	AluSx4	SINE/Alu	(16)	294	14	3248615
254	26.2	3.4	3.4	chr5	144010197	144010209	(37528050)	C	MER57A-int	LTR/ERV1	(3358)	1765	1753	3248613
2742	15.1	1.3	1.3	chr5	144010226	144010688	(37527571)	C	LTR2	LTR/ERV1	(0)	463	1	3248616
51	9.6	0.0	2.4	chr5	171636027	171636110	(9902149)	+	(TCTTT)n	Simple_repeat	1	84	(0)	3295731
2301	12.9	0.3	0.0	chr5	171636111	171636419	(9901840)	C	AluSz	SINE/Alu	(1)	311	2	3295732
31	20.4	3.4	2.2	chr5	173328239	173328327	(8209932)	+	(CTC)n	Simple_repeat	1	92	(0)	3299412
13	29.6	1.8	1.8	chr5	173328637	173328695	(8209564)	+	(TGCG)n	Simple_repeat	1	59	(0)	3299413
11	11.1	6.9	0.0	chr5	177425969	177425997	(4112262)	+	(GGCCGA)n	Simple_repeat	1	31	(0)	3307399
8110	6.3	1.2	0.2	chr5	177561137	177562133	(3976126)	+	LTR13	LTR/ERVK	1	1007	(0)	3307628
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
2543	3.6	0.0	0.7	chr5	179632025	179632333	(1905926)	+	AluYa5	SINE/Alu	1	307	(4)	3311229
308	2.1	0.0	2.0	chr5	179632755	179632803	(1905456)	C	AluY	SINE/Alu	(0)	301	254	3311230
2078	18.1	8.7	2.4	chr5	180458441	180458905	(1079354)	+	LOR1a	LTR/ERV1	1	497	(0)	3312682
506	12.6	0.0	0.0	chr5	180458906	180458992	(1079267)	+	FLAM_C	SINE/Alu	11	97	(69)	3312683
3765	10.3	4.8	0.6	chr5	180458993	180459774	(1078485)	+	LTR12C	LTR/ERV1	3	1322	(0)	3312684
317	31.0	9.1	6.8	chr6	917527	917905	(169888074)	C	L2c	LINE/L2	(1)	3374	2988	3315396
2209	19.3	3.2	0.9	chr6	918023	918472	(169887507)	C	LOR1b	LTR/ERV1	(0)	461	1	3315397
2223	13.2	5.3	0.8	chr6	1442139	1442496	(169363483)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3316115
1467	14.6	7.6	2.4	chr6	1442497	1442714	(169363265)	+	LOR1b	LTR/ERV1	233	461	(0)	3316114
360	23.9	12.7	0.0	chr6	1442715	1442831	(169363148)	C	MER5A1	DNA/hAT-Charlie	(29)	137	4	3316116
43688	8.4	1.5	1.1	chr6	2316759	2317645	(168488334)	C	Harlequin-int	LTR/ERV1	(5882)	1014	2	3317254
3569	5.7	0.7	0.0	chr6	2317646	2318098	(168487881)	C	LTR2	LTR/ERV1	(0)	463	8	3317256
2836	14.9	4.2	2.7	chr6	2710287	2710775	(168095204)	+	LOR1a	LTR/ERV1	1	497	(0)	3317806
594	32.5	6.4	1.9	chr6	2710880	2711149	(168094830)	+	Chap1_Mam	DNA/hAT-Charlie	60	342	(0)	3317807
2306	17.6	2.6	7.0	chr6	6951149	6951631	(163854348)	+	LOR1b	LTR/ERV1	1	461	(0)	3324267
1494	14.9	10.1	1.9	chr6	6951632	6951653	(163854326)	+	L1M3	LINE/L1	4962	4983	(1157)	3324266
2928	27.7	8.3	4.9	chr6	13964482	13965679	(156840300)	+	L1MEj	LINE/L1	5	1238	(922)	3335227
2157	18.7	4.8	0.9	chr6	13965680	13966122	(156839857)	C	LOR1b	LTR/ERV1	(0)	461	1	3335228
2185	19.3	6.5	0.0	chr6	14808015	14808445	(155997534)	C	LOR1b	LTR/ERV1	(0)	461	1	3336580
3498	11.2	0.0	0.6	chr6	16812808	16813299	(153992680)	+	LOR1a	LTR/ERV1	9	497	(0)	3340089
262	33.9	4.3	0.0	chr6	16813300	16813411	(153992568)	+	L2c	LINE/L2	3268	3384	(3)	3340088
16	19.6	0.0	0.0	chr6	17303507	17303536	(153502443)	+	G-rich	Low_complexity	1	30	(0)	3340890
49	20.1	4.4	3.6	chr6	17303537	17303668	(153502311)	+	GA-rich	Low_complexity	5	167	(0)	3340891
3066	12.2	1.6	4.8	chr6	17303671	17304017	(153501962)	+	L1MA4	LINE/L1	5796	6150	(150)	3340892
432	14.7	0.0	0.5	chr6	17331281	17331354	(153474625)	+	FLAM_C	SINE/Alu	1	61	(72)	3340945
2314	16.6	3.3	4.1	chr6	17331355	17331818	(153474161)	C	LOR1b	LTR/ERV1	(0)	461	2	3340946
1843	14.7	1.4	0.0	chr6	19113304	19113576	(151692403)	C	AluSz6	SINE/Alu	(34)	278	2	3344019
3052	31.5	6.9	4.0	chr6	19113581	19116086	(151689893)	C	L1MA7	LINE/L1	(4066)	3499	1268	3344010
50	0.0	0.0	0.0	chr6	26365475	26365517	(144440462)	+	(TG)n	Simple_repeat	1	43	(0)	3355125
1768	17.5	5.3	5.5	chr6	28566269	28566685	(142239294)	+	LTR2C	LTR/ERV1	86	501	(0)	3358839
893	20.7	0.0	0.0	chr6	28566734	28566878	(142239101)	C	AluJo	SINE/Alu	(31)	281	137	3358840
3704	6.3	0.7	0.0	chr6	28566946	28567405	(142238574)	C	LTR2	LTR/ERV1	(0)	463	1	3358841
2851	10.6	11.8	4.6	chr6	28752704	28753112	(142052867)	C	LTR61	LTR/ERV1	(106)	453	1	3359156
582	6.9	0.0	0.0	chr6	28795964	28796035	(142009944)	C	tRNA-Ala-GCY_	tRNA	(3)	72	1	3359235
2387	7.2	2.3	0.0	chr6	28796196	28796488	(142009491)	+	AluSg7	SINE/Alu	2	301	(8)	3359236
2348	23.3	4.0	5.4	chr6	30222731	30223451	(140582528)	C	L1ME3D	LINE/L1	(235)	6007	5290	3361284
3064	14.0	2.4	1.6	chr6	30223452	30223944	(140582035)	C	LOR1a	LTR/ERV1	(0)	497	1	3361290
6492	11.4	2.0	1.3	chr6	30411305	30412251	(140393728)	+	LTR13_	LTR/ERVK	1	954	(0)	3361566
18	4.1	0.0	6.9	chr6	31834547	31834575	(138971404)	+	(GC)n	Simple_repeat	1	29	(0)	3363981
60	13.5	6.5	1.4	chr6	34942814	34942986	(135862993)	+	(CTTTTC)n	Simple_repeat	1	181	(0)	3369507
1430	20.4	4.8	0.0	chr6	34942995	34943254	(135862725)	C	AluJr4	SINE/Alu	(39)	273	1	3369508
5416	13.1	7.1	5.9	chr6	34943255	34943991	(135861988)	C	L1MC2	LINE/L1	(28)	6316	5568	3369509
14	30.2	3.6	2.3	chr6	41895231	41895314	(128910665)	+	(CCTCCCC)n	Simple_repeat	1	87	(0)	3382036
310	31.7	5.3	3.4	chr6	47496882	47497175	(123308804)	C	HAL1ME	LINE/L1	(192)	2273	1974	3391853
87	12.8	5.7	4.5	chr6	47497190	47497419	(123308560)	+	(TTTCC)n	Simple_repeat	1	232	(0)	3391854
1548	14.6	0.7	8.5	chr6	47497420	47497714	(123308265)	C	AluJb	SINE/Alu	(38)	274	3	3391855
3163	13.3	0.4	0.4	chr6	63213139	63213635	(107592344)	+	LOR1a	LTR/ERV1	1	497	(0)	3410143
303	30.8	2.1	0.0	chr6	70038709	70038799	(100767180)	C	MER5A	DNA/hAT-Charlie	(83)	106	14	3418725
1510	7.4	5.3	2.0	chr6	70038868	70039069	(100766910)	+	AluSc	SINE/Alu	84	292	(17)	3418726
672	25.3	2.3	1.2	chr6	70039074	70039245	(100766734)	+	MER5B	DNA/hAT-Charlie	2	175	(3)	3418727
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
3195	13.9	0.2	0.4	chr6	82468677	82469174	(88336805)	+	LOR1a	LTR/ERV1	1	497	(0)	3435215
756	17.3	0.7	0.7	chr6	82469354	82469504	(88336475)	C	L1M5	LINE/L1	(1896)	4250	4100	3435219
190	29.5	6.0	1.3	chr6	82677761	82677839	(88128140)	C	Penelope1_Vert	LINE/Penelope	(981)	106	24	3435476
3361	12.5	0.2	0.2	chr6	82677845	82678341	(88127638)	C	LOR1a	LTR/ERV1	(0)	497	1	3435477
2333	13.7	9.6	1.2	chr6	82918628	82919049	(87886930)	+	LOR1b	LTR/ERV1	1	461	(0)	3435797
348	28.7	1.0	9.0	chr6	87882007	87882117	(82923862)	C	L2c	LINE/L2	(0)	3387	3286	3442392
3686	8.8	1.6	0.0	chr6	87882121	87882609	(82923370)	C	LOR1a	LTR/ERV1	(0)	497	1	3442393
2043	9.9	0.4	0.0	chr6	89897803	89898064	(80907915)	+	AluSp	SINE/Alu	1	263	(50)	3445608
133	5.6	5.1	1.3	chr6	89898075	89898288	(80907691)	+	(CTTTC)n	Simple_repeat	1	225	(0)	3445609
805	8.7	0.0	0.0	chr6	89898289	89898392	(80907587)	C	HY1	scRNA	(15)	104	1	3445610
20	11.6	0.0	0.0	chr6	90218492	90218526	(80587453)	+	(T)n	Simple_repeat	1	35	(0)	3446049
1671	18.1	3.7	1.8	chr6	103367195	103367587	(67438392)	C	MER67C	LTR/ERV1	(306)	405	1	3462648
2279	11.8	0.0	0.0	chr6	104887670	104887973	(65918006)	C	AluSc	SINE/Alu	(0)	309	6	3464594
2047	16.0	8.4	0.0	chr6	104887988	104888369	(65917610)	+	LOR1b	LTR/ERV1	45	461	(0)	3464595
914	18.8	4.2	0.6	chr6	106705001	106705182	(64100797)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	3467369
2864	14.4	4.2	1.1	chr6	106705262	106705739	(64100240)	C	LOR1a	LTR/ERV1	(1)	496	3	3467370
17	18.7	3.3	4.8	chr6	111483720	111483779	(59322200)	+	(GCGG)n	Simple_repeat	1	62	(0)	3475666
11591	10.6	1.3	0.2	chr6	115197821	115199431	(55606548)	C	THE1D-int	LTR/ERVL-MaLR	(2)	1629	1	3481042
3515	10.3	0.4	0.4	chr6	117928866	117929362	(52876617)	+	LOR1a	LTR/ERV1	1	497	(0)	3484499
18	12.2	2.8	0.0	chr6	117929377	117929412	(52876567)	+	(ATCT)n	Simple_repeat	1	37	(0)	3484500
305	27.8	12.9	8.8	chr6	118651557	118651749	(52154230)	C	L1M4b	LINE/L1	(6265)	602	401	3485446
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
12408	17.8	1.0	5.4	chr6	120582143	120585043	(50220936)	C	L1PA8A	LINE/L1	(3556)	2775	13	3487969
15	10.1	2.9	2.9	chr6	127266776	127266809	(43539170)	+	G-rich	Low_complexity	1	35	(0)	3496650
19	20.5	0.0	0.0	chr6	130224993	130225031	(40580948)	+	(TG)n	Simple_repeat	1	39	(0)	3500617
22	21.8	0.0	3.2	chr6	130225033	130225094	(40580885)	+	GA-rich	Low_complexity	1	62	(0)	3500618
1802	17.2	27.4	0.3	chr6	130225158	130225517	(40580462)	C	LOR1b	LTR/ERV1	(0)	461	1	3500619
2283	18.4	3.7	3.3	chr6	134824895	134825042	(35980937)	C	LOR1b	LTR/ERV1	(0)	461	323	3507517
2287	11.7	0.3	0.0	chr6	134825043	134825340	(35980639)	+	AluSx	SINE/Alu	1	299	(13)	3507518
7835	7.4	1.3	1.8	chr6	139615716	139617638	(31188341)	C	L1PB1	LINE/L1	(1)	6150	4237	3514974
41	5.8	5.3	2.5	chr6	139617640	139617715	(31188264)	+	(CCTTTC)n	Simple_repeat	1	80	(0)	3514975
14	20.3	2.8	0.0	chr6	139617682	139617717	(31188262)	+	(CTTT)n	Simple_repeat	1	37	(0)	3514976
974	9.4	1.6	0.0	chr6	139617718	139617844	(31188135)	C	AluSc	SINE/Alu	(8)	301	173	3514977
2228	10.5	0.3	0.3	chr6	140702879	140703174	(30102805)	+	AluY	SINE/Alu	1	296	(15)	3516375
2274	18.9	2.4	4.7	chr6	140703175	140703216	(30102763)	C	Tigger7	DNA/TcMar-Tigger	(2387)	104	73	3516374
2120	19.4	3.7	0.7	chr6	140703217	140703663	(30102316)	C	LOR1b	LTR/ERV1	(0)	461	1	3516376
1526	18.9	9.3	1.4	chr6	140767630	140767984	(30037995)	+	MLT1B	LTR/ERVL-MaLR	1	386	(4)	3516458
1539	17.2	20.9	0.2	chr6	140768057	140768454	(30037525)	+	LOR1a	LTR/ERV1	17	497	(0)	3516459
12	9.7	5.4	5.1	chr6	140768496	140768532	(30037447)	+	A-rich	Low_complexity	1	39	(0)	3516460
590	28.4	3.0	2.2	chr6	141410272	141410501	(29395478)	C	L1ME2	LINE/L1	(1)	6163	5932	3517230
2294	17.8	6.6	0.7	chr6	141410610	141411038	(29394941)	C	LOR1b	LTR/ERV1	(0)	461	6	3517231
2154	20.2	4.4	0.7	chr6	141872367	141872800	(28933179)	+	LOR1b	LTR/ERV1	1	451	(10)	3517802
1248	27.2	3.6	5.1	chr6	141872806	141873377	(28932602)	C	L1MC5a	LINE/L1	(2207)	570	8	3517803
1694	14.4	8.6	0.4	chr6	141922884	141923162	(28882817)	+	LOR1b	LTR/ERV1	158	461	(0)	3517872
720	26.7	11.1	10.1	chr6	141923218	141923742	(28882237)	+	MLT1F	LTR/ERVL-MaLR	18	548	(0)	3517874
19	19.3	1.5	6.0	chr6	142946358	142946423	(27859556)	+	GA-rich	Low_complexity	1	67	(0)	3519180
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
11	14.1	0.0	8.1	chr6	144007925	144007961	(26798018)	+	(GGACCC)n	Simple_repeat	1	37	(0)	3520695
1107	25.7	4.1	4.6	chr6	144102871	144103141	(26702838)	+	MamRep1151	LTR?	431	705	(4)	3520856
426	27.4	5.1	3.0	chr6	144103150	144103279	(26702700)	C	L1M5	LINE/L1	(1507)	4639	4499	3520858
2020	14.8	2.6	1.0	chr6	144103280	144103308	(26702671)	C	AluSz6	SINE/Alu	(2)	310	282	3520859
119	0.0	0.0	0.9	chr6	144103309	144103416	(26702563)	+	(TTCCT)n	Simple_repeat	1	108	(0)	3520860
2020	14.8	2.6	1.0	chr6	144103417	144103691	(26702288)	C	AluSz6	SINE/Alu	(32)	280	1	3520859
426	27.0	5.1	3.3	chr6	144103692	144103790	(26702189)	C	L1M5	LINE/L1	(1648)	4498	4404	3520858
1237	29.1	4.0	3.4	chr6	146440534	146441009	(24364970)	C	LTR16C	LTR/ERVL	(2)	487	9	3524026
784	19.6	8.2	0.0	chr6	147696934	147697112	(23108867)	C	MLT1A0	LTR/ERVL-MaLR	(46)	319	125	3525766
904	11.0	0.0	2.0	chr6	147697117	147697265	(23108714)	C	LOR1b	LTR/ERV1	(0)	497	352	3525767
143	24.6	3.3	1.8	chr6	152371571	152371999	(18433980)	+	GA-rich	Low_complexity	1	443	(0)	3533435
2036	18.4	3.3	6.7	chr6	153858501	153858978	(16947001)	+	LOR1b	LTR/ERV1	1	461	(0)	3535481
438	27.6	3.5	2.4	chr6	154615686	154615852	(16190127)	+	LTR16A1	LTR/ERVL	1	169	(287)	3536707
466	29.1	13.4	3.1	chr6	156190788	156191113	(14614866)	C	L1MC5a	LINE/L1	(1968)	809	445	3539134
1754	14.2	1.1	2.5	chr6	156191115	156191396	(14614583)	+	AluJo	SINE/Alu	21	298	(14)	3539135
159	0.0	0.0	2.6	chr6	156191397	156191552	(14614427)	+	(AAAGG)n	Simple_repeat	1	156	(0)	3539136
33	0.0	0.0	0.0	chr6	159727375	159727405	(11078574)	+	(GGCGGGA)n	Simple_repeat	1	31	(0)	3544510
22	22.7	3.4	4.3	chr6	159727409	159727497	(11078482)	+	(GGCGC)n	Simple_repeat	1	92	(0)	3544511
213	32.0	2.3	4.6	chr6	168035740	168035870	(2770109)	+	MIRc	SINE/MIR	24	151	(117)	3555076
332	28.3	12.2	3.2	chr6	170450086	170450271	(355708)	+	MIRb	SINE/MIR	44	248	(20)	3557442
1164	1.9	2.5	1.6	chr7	905360	906656	(158439317)	+	(GAAAGGA)n	Simple_repeat	1	1329	(0)	3559041
638	24.0	7.8	1.5	chr7	4483586	4483788	(154862185)	+	MLT1F1	LTR/ERVL-MaLR	341	557	(12)	3564929
244	30.6	4.0	0.0	chr7	4483797	4483868	(154862105)	+	LTR78	LTR/ERV1	662	736	(568)	3564930
38	17.9	3.8	0.0	chr7	4483892	4483970	(154862003)	+	GA-rich	Low_complexity	1	82	(0)	3564931
1439	12.4	3.2	0.0	chr7	4483971	4484180	(154861793)	C	LOR1a	LTR/ERV1	(0)	497	281	3564932
433	17.8	4.1	5.6	chr7	4484168	4484292	(154861681)	C	LOR1a	LTR/ERV1	(338)	123	1	3564932
257	21.8	6.4	0.5	chr7	4484293	4485042	(154860931)	+	GA-rich	Low_complexity	1	798	(0)	3564933
600	25.6	4.9	5.5	chr7	4659458	4659581	(154686392)	+	L1ME3B	LINE/L1	5942	6059	(183)	3565310
725	23.2	13.9	3.1	chr7	4659621	4660181	(154685792)	+	LTR50	LTR/ERVL	56	765	(30)	3565314
6301	11.4	4.4	2.0	chr7	6516203	6517050	(152828923)	+	LTR13_	LTR/ERVK	1	880	(74)	3569561
899	21.5	0.0	0.0	chr7	12888237	12888422	(146457551)	C	AluJb	SINE/Alu	(7)	305	120	3578001
286	25.1	0.0	0.0	chr7	12888424	12888497	(146457476)	C	AluJb	SINE/Alu	(115)	187	120	3578001
120	3.1	4.0	1.7	chr7	12888503	12888676	(146457297)	+	(TTTCC)n	Simple_repeat	1	181	(0)	3578002
857	16.2	0.0	0.7	chr7	12888678	12888813	(146457160)	C	FLAM_C	SINE/Alu	(8)	135	1	3578003
1098	27.5	5.2	1.7	chr7	22431599	22431953	(136914020)	+	LTR33	LTR/ERVL	39	406	(109)	3590658
2162	16.3	2.0	2.2	chr7	22431957	22432256	(136913717)	+	MLT1A0	LTR/ERVL-MaLR	1	305	(60)	3590659
953	21.9	10.6	4.3	chr7	26955378	26955633	(132390340)	+	AluJb	SINE/Alu	3	276	(36)	3597786
75	0.0	0.0	0.0	chr7	26955664	26955730	(132390243)	+	(GGAAA)n	Simple_repeat	1	67	(0)	3597787
2348	11.7	0.7	0.0	chr7	28110144	28110451	(131235522)	+	AluSx	SINE/Alu	1	310	(2)	3599501
139	0.9	9.4	0.4	chr7	28110452	28110666	(131235307)	+	(AAAGGA)n	Simple_repeat	1	234	(0)	3599502
13	7.5	7.1	0.0	chr7	38909068	38909095	(120436878)	+	(CTCCA)n	Simple_repeat	1	30	(0)	3615797
3056	11.0	3.0	2.0	chr7	45192445	45192721	(114153252)	C	LOR1a	LTR/ERV1	(0)	497	228	3625626
1478	17.0	15.7	1.8	chr7	49884264	49884658	(109461315)	C	LOR1b	LTR/ERV1	(0)	461	2	3631702
2155	14.2	0.0	1.9	chr7	52322919	52323235	(107022738)	C	AluSx1	SINE/Alu	(1)	311	1	3634761
31	19.5	3.3	3.2	chr7	52323704	52323794	(107022179)	+	(TTCTTT)n	Simple_repeat	1	94	(0)	3634762
2150	16.2	2.1	0.6	chr7	52597985	52598349	(106747624)	C	LOR1-int	LTR/ERV1	(7749)	371	1	3635108
2203	18.4	4.6	0.9	chr7	52598350	52598793	(106747180)	C	LOR1b	LTR/ERV1	(0)	461	1	3635108
10319	11.6	0.3	0.3	chr7	52821314	52822769	(106523204)	C	MSTA-int	LTR/ERVL-MaLR	(175)	1456	1	3635419
737	23.7	6.1	0.4	chr7	53888412	53888644	(105457329)	+	L1MC4a	LINE/L1	5457	5703	(476)	3636762
255	21.9	4.9	9.3	chr7	53888635	53888661	(105457312)	+	L1MC4a	LINE/L1	6048	6075	(369)	3636762
3355	11.9	0.2	1.0	chr7	53888662	53889162	(105456811)	C	LOR1a	LTR/ERV1	(0)	497	1	3636767
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
1155	23.9	6.9	0.6	chr7	65441151	65441462	(93904511)	C	LTR90A	LTR	(0)	976	644	3647839
2373	6.7	1.4	1.0	chr7	66185502	66185798	(93160175)	+	AluY	SINE/Alu	2	299	(12)	3649463
2234	16.8	1.0	3.7	chr7	66185799	66186108	(93159865)	+	LOR1b	LTR/ERV1	163	461	(0)	3649462
704	16.4	8.4	8.4	chr7	66186123	66186227	(93159746)	+	MER5A1	DNA/hAT-Charlie	1	111	(55)	3649464
26	0.0	0.0	0.0	chr7	66186228	66186252	(93159721)	+	(ATTTT)n	Simple_repeat	1	25	(0)	3649465
1777	11.0	3.6	3.9	chr7	66186256	66186399	(93159574)	C	AluSz	SINE/Alu	(32)	280	137	3649466
3172	12.0	2.6	6.2	chr7	66980430	66980869	(92365104)	+	LOR1a	LTR/ERV1	68	497	(0)	3651254
2515	16.1	1.6	6.2	chr7	68917084	68917553	(90428420)	+	LOR1a	LTR/ERV1	50	497	(0)	3655522
224	27.4	2.7	0.0	chr7	68917554	68917626	(90428347)	+	MIR	SINE/MIR	138	212	(50)	3655523
1062	20.0	2.1	0.0	chr7	68917629	68917818	(90428155)	+	AluJo	SINE/Alu	108	301	(11)	3655524
259	19.4	14.3	4.0	chr7	70693622	70693696	(88652277)	C	MIRb	SINE/MIR	(18)	250	167	3658700
25	18.1	1.1	7.9	chr7	70693944	70694031	(88651942)	+	G-rich	Low_complexity	1	89	(0)	3658701
679	21.4	1.7	7.5	chr7	71925645	71925831	(87420142)	+	LTR41B	LTR/ERVL	1	176	(582)	3661247
1154	13.6	0.0	0.0	chr7	71925859	71926020	(87419953)	C	AluSx1	SINE/Alu	(17)	295	134	3661248
233	31.1	9.8	0.0	chr7	71926052	71926125	(87419848)	+	LTR41B	LTR/ERVL	277	358	(400)	3661247
629	21.5	2.0	3.2	chr7	72191683	72191908	(87154065)	C	MLT1D	LTR/ERVL-MaLR	(0)	627	314	3661791
408	11.8	0.0	9.3	chr7	72191909	72191983	(87153990)	+	MADE1	DNA/TcMar-Mariner	1	68	(12)	3661792
322	14.3	0.0	0.0	chr7	72191972	72192020	(87153953)	+	MADE1	DNA/TcMar-Mariner	32	80	(0)	3661793
311	24.7	0.0	10.5	chr7	72192022	72192116	(87153857)	C	MLT1D	LTR/ERVL-MaLR	(191)	314	230	3661791
7180	8.4	1.0	0.4	chr7	73749696	73750685	(85595288)	C	LTR5B	LTR/ERVK	(6)	996	1	3665375
206	27.7	0.0	0.0	chr7	73750724	73750770	(85595203)	C	MIR	SINE/MIR	(3)	259	213	3665376
2300	16.0	2.3	0.5	chr7	73750771	73751159	(85594814)	C	LOR1b	LTR/ERV1	(0)	461	66	3665377
11518	11.4	0.4	0.1	chr7	77209017	77210642	(82135331)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3673436
3184	13.1	1.8	0.2	chr7	80543708	80544195	(78801778)	C	LOR1a	LTR/ERV1	(1)	496	1	3678344
2300	17.7	4.5	0.0	chr7	81049355	81049794	(78296179)	+	LOR1b	LTR/ERV1	1	461	(0)	3679014
2287	8.5	1.7	0.0	chr7	81049810	81050091	(78295882)	C	AluY	SINE/Alu	(14)	297	11	3679015
22	13.8	0.0	0.0	chr7	82443816	82443855	(76902118)	+	(GCGGAG)n	Simple_repeat	1	40	(0)	3680896
9428	13.0	3.6	2.2	chr7	85178225	85179662	(74166311)	+	THE1C-int	LTR/ERVL-MaLR	1	1469	(111)	3684477
1620	16.2	4.1	2.8	chr7	87547873	87548027	(71797946)	+	AluJb	SINE/Alu	143	302	(10)	3687342
42	42.2	0.6	3.5	chr7	87548028	87548412	(71797561)	+	A-rich	Low_complexity	1	373	(0)	3687344
19	28.2	1.6	7.2	chr7	87876335	87876457	(71469516)	+	G-rich	Low_complexity	1	125	(0)	3687771
109	15.3	3.6	4.5	chr7	90446442	90446718	(68899255)	+	(TTTCC)n	Simple_repeat	1	287	(0)	3691094
1477	16.3	5.6	0.0	chr7	90976931	90977218	(68368755)	C	L1MA5A	LINE/L1	(975)	5168	4864	3691858
1365	17.4	25.4	1.3	chr7	90977220	90977604	(68368369)	C	LOR1a	LTR/ERV1	(2)	495	18	3691861
350	19.0	10.7	4.8	chr7	97107042	97107146	(62238827)	C	L1ME5	LINE/L1	(10)	6184	6073	3700276
228	32.6	7.4	2.8	chr7	97107151	97107292	(62238681)	+	L2	LINE/L2	2770	2918	(501)	3700277
3075	10.3	0.6	13.2	chr7	97107293	97107861	(62238112)	C	LOR1a	LTR/ERV1	(0)	497	1	3700278
400	10.8	0.2	2.5	chr7	98810993	98811637	(60534336)	+	(TGG)n	Simple_repeat	1	646	(0)	3703453
17	10.8	4.5	4.3	chr7	99143814	99143857	(60202116)	+	(CGCCC)n	Simple_repeat	1	46	(0)	3704035
2374	8.1	1.0	0.0	chr7	100427419	100427715	(58918258)	+	AluSx1	SINE/Alu	2	301	(11)	3706564
12	23.3	2.3	2.3	chr7	100427868	100427910	(58918063)	+	(TCCC)n	Simple_repeat	1	44	(0)	3706565
1624	19.7	4.2	0.3	chr7	105209268	105209566	(54136407)	+	AluJo	SINE/Alu	1	311	(1)	3715328
64	28.4	1.4	3.7	chr7	105209567	105209769	(54136204)	+	A-rich	Low_complexity	1	198	(0)	3715329
11717	10.1	0.9	1.8	chr7	105711266	105712909	(53633064)	C	MSTA-int	LTR/ERVL-MaLR	(1)	1630	1	3716432
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
2974	13.5	0.0	1.9	chr7	113389276	113389744	(45956229)	+	LOR1b	LTR/ERV1	1	460	(1)	3727066
2125	11.5	4.2	3.2	chr7	113389745	113390121	(45955852)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3727067
10681	16.7	4.0	5.4	chr7	116345945	116347517	(42998456)	C	L1MB3	LINE/L1	(3336)	3040	1472	3730916
786	11.4	0.0	1.7	chr7	116347518	116347633	(42998340)	C	LOR1b	LTR/ERV1	(0)	461	348	3730921
2147	16.4	5.9	1.8	chr7	117075793	117076234	(42269739)	+	LOR1b	LTR/ERV1	1	461	(0)	3732051
6823	13.8	9.7	4.8	chr7	123417454	123418692	(35927281)	C	THE1C-int	LTR/ERVL-MaLR	(323)	1308	3	3740401
2255	10.9	1.6	0.3	chr7	123866780	123867083	(35478890)	C	AluSc	SINE/Alu	(0)	309	2	3741085
3039	14.7	0.8	0.4	chr7	123867130	123867614	(35478359)	C	LOR1a	LTR/ERV1	(10)	487	1	3741086
1432	21.6	14.6	1.5	chr7	129586277	129586675	(29759298)	+	LTR2	LTR/ERV1	1	460	(3)	3749455
394	16.5	8.8	1.9	chr7	129586708	129586812	(29759161)	+	L1MD3	LINE/L1	7876	7988	(7)	3749458
15	16.3	4.7	2.2	chr7	134779647	134779689	(24566284)	+	(CTGC)n	Simple_repeat	1	45	(0)	3758022
12	20.1	2.6	2.6	chr7	135977720	135977757	(23368216)	+	(TTCC)n	Simple_repeat	1	39	(0)	3759917
12	23.1	0.0	2.6	chr7	135977742	135977779	(23368194)	+	(CCCT)n	Simple_repeat	1	38	(0)	3759918
1745	16.9	9.8	2.9	chr7	136236233	136236550	(23109423)	C	LOR1b	LTR/ERV1	(0)	461	122	3760333
16	20.5	0.0	0.0	chr7	138460183	138460221	(20885752)	+	G-rich	Low_complexity	1	39	(0)	3763674
14	16.1	0.0	0.0	chr7	138460459	138460486	(20885487)	+	GA-rich	Low_complexity	1	28	(0)	3763675
22	19.9	0.0	0.0	chr7	141737767	141737807	(17608166)	+	(T)n	Simple_repeat	1	41	(0)	3769756
1540	14.3	1.3	0.0	chr7	141737809	141738038	(17607935)	C	AluJb	SINE/Alu	(2)	310	78	3769757
420	30.6	0.0	4.0	chr7	141738729	141738854	(17607119)	C	L2a	LINE/L2	(16)	3410	3290	3769758
33	11.4	1.3	6.5	chr7	146116098	146116173	(13229800)	+	GA-rich	Low_complexity	1	77	(0)	3775457
26	0.0	0.0	0.0	chr7	146116215	146116239	(13229734)	+	(GGC)n	Simple_repeat	1	25	(0)	3775458
3526	21.8	3.4	8.8	chr7	146500002	146500219	(12845754)	C	L1M4	LINE/L1	(1776)	4370	4206	3776020
2334	17.0	4.1	1.3	chr7	146500220	146500667	(12845306)	C	LOR1b	LTR/ERV1	(0)	461	1	3776021
3526	21.8	3.4	8.8	chr7	146500668	146501637	(12844336)	C	L1M4	LINE/L1	(1941)	4205	3248	3776020
2137	12.5	0.0	0.3	chr7	149036414	149036724	(10309249)	+	AluSz	SINE/Alu	1	310	(2)	3779871
1904	15.8	13.7	0.2	chr7	149036738	149037136	(10308837)	C	LOR1b	LTR/ERV1	(0)	461	1	3779872
3265	14.6	0.6	1.2	chr7	149548055	149548554	(9797419)	+	LOR1a	LTR/ERV1	1	497	(0)	3780844
369	31.1	11.1	0.0	chr7	149855500	149855676	(9490297)	C	LTR78	LTR/ERV1	(436)	868	670	3781246
4892	4.2	0.5	0.2	chr7	152029469	152030046	(7315927)	C	HERV9N-int	LTR/ERV1	(633)	4741	4162	3784470
841	0.0	2.9	0.0	chr7	152030047	152030146	(7315827)	C	LTR13	LTR/ERVK	(0)	1007	905	3784471
3690	4.0	6.6	0.0	chr7	152030144	152030595	(7315378)	C	LTR13	LTR/ERVK	(523)	484	1	3784471
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
131	4.7	9.2	2.8	chr7	153964780	153965044	(5380929)	+	(TCCTT)n	Simple_repeat	1	281	(0)	3787684
11	24.0	2.6	0.0	chr7	154852402	154852440	(4493533)	+	(CCCACTT)n	Simple_repeat	1	40	(0)	3788832
76	5.8	0.0	0.0	chr7	154852466	154852555	(4493418)	+	(CTCTCCTGC)n	Simple_repeat	1	90	(0)	3788833
617	34.3	8.8	6.0	chr7	154852579	154853062	(4492911)	C	L2a	LINE/L2	(3)	3423	2925	3788834
3937	16.1	17.0	0.8	chr7	157111372	157112123	(2233850)	C	LTR1D1	LTR/ERV1	(0)	899	1	3791866
938	25.2	1.6	6.2	chr7	157112124	157112448	(2233525)	+	L1MC5	LINE/L1	8993	9302	(2)	3791867
16	0.0	3.9	3.7	chr7	158151565	158151590	(1194383)	+	(GTG)n	Simple_repeat	1	27	(0)	3793030
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
122	0.0	0.0	0.0	chr8	9283285	9283390	(135855246)	+	(TTCCT)n	Simple_repeat	1	106	(0)	3806239
22	9.2	0.0	0.0	chr8	9283393	9283427	(135855209)	+	(CCTT)n	Simple_repeat	1	35	(0)	3806240
562	26.5	10.5	0.9	chr8	9283459	9283690	(135854946)	C	L1ME4b	LINE/L1	(9)	883	627	3806241
2244	17.4	7.8	3.6	chr8	9372696	9373136	(135765500)	+	LOR1b	LTR/ERV1	1	461	(0)	3806386
2263	17.3	3.5	3.9	chr8	9503604	9504066	(135634570)	+	LOR1b	LTR/ERV1	1	461	(0)	3806618
2398	17.2	5.2	0.0	chr8	9784758	9785194	(135353442)	C	LOR1b	LTR/ERV1	(0)	461	1	3807031
1782	19.5	1.3	0.3	chr8	9792263	9792569	(135346067)	+	AluJb	SINE/Alu	1	310	(2)	3807051
59	9.4	7.8	0.0	chr8	9792570	9792687	(135345949)	+	G-rich	Low_complexity	1	127	(0)	3807052
2900	16.8	13.6	0.1	chr8	9792699	9793633	(135345003)	+	L1MC4	LINE/L1	4794	5897	(2145)	3807050
2190	19.5	1.1	3.6	chr8	25520347	25520738	(119617898)	C	LOR1b	LTR/ERV1	(0)	461	82	3831236
2119	11.5	0.7	0.0	chr8	25520739	25521024	(119617612)	+	AluSx	SINE/Alu	1	288	(24)	3831237
3531	12.1	0.0	0.2	chr8	29506154	29506651	(115631985)	+	LOR1a	LTR/ERV1	1	497	(0)	3838038
2033	18.6	0.0	0.0	chr8	41366860	41367171	(103771465)	+	AluJr	SINE/Alu	1	312	(0)	3856859
142	2.1	0.7	1.3	chr8	41367186	41367334	(103771302)	+	(GAAAG)n	Simple_repeat	1	150	(0)	3856860
894	24.4	12.7	2.2	chr8	41367357	41367747	(103770889)	+	HAL1	LINE/L1	1177	1620	(845)	3856853
2255	23.9	5.3	5.2	chr8	41367752	41368392	(103770244)	C	L1MC4	LINE/L1	(581)	7461	6820	3856861
299	24.9	12.0	4.7	chr8	42052703	42052871	(103085765)	C	MIRb	SINE/MIR	(22)	186	4	3858034
469	22.1	1.5	0.8	chr8	47336158	47336306	(97802330)	C	L1M4	LINE/L1	(365)	5818	5668	3861796
1957	16.2	2.3	0.0	chr8	47336308	47336653	(97801983)	C	LOR1b	LTR/ERV1	(0)	461	108	3861797
659	22.7	4.6	8.4	chr8	49549342	49549559	(95589077)	C	L1MEc	LINE/L1	(912)	5407	5201	3864568
2560	16.1	1.5	0.4	chr8	49549560	49550015	(95588621)	C	LOR1b	LTR/ERV1	(0)	461	1	3864569
2594	16.5	4.1	0.0	chr8	52991729	52992170	(92146466)	+	LOR1b	LTR/ERV1	1	461	(0)	3868966
2430	18.2	8.7	1.8	chr8	52992171	52992645	(92145991)	+	MER89	LTR/ERV1	49	559	(0)	3868965
2614	15.5	7.5	1.5	chr8	53524732	53525195	(91613441)	C	HERVE_a-int	LTR/ERV1	(7353)	494	1	3869606
3047	9.7	11.1	0.0	chr8	53525196	53525491	(91613145)	C	LTR2C	LTR/ERV1	(0)	501	173	3869606
3875	5.6	0.0	0.0	chr8	55706083	55706545	(89432091)	+	LTR2	LTR/ERV1	1	463	(0)	3872756
5868	8.5	0.2	0.0	chr8	55706546	55707336	(89431300)	+	Harlequin-int	LTR/ERV1	1	793	(7054)	3872756
195	35.2	0.0	0.0	chr8	56093528	56093581	(89045055)	+	L2c	LINE/L2	3283	3336	(51)	3873542
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
1485	28.3	1.5	2.6	chr8	57214477	57215085	(87923551)	C	MER50	LTR/ERV1	(123)	611	10	3874995
2051	17.0	1.6	0.3	chr8	63071577	63071936	(82066700)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	3882670
523	26.8	0.8	0.0	chr8	63072124	63072246	(82066390)	C	L2a	LINE/L2	(0)	3426	3303	3882671
3311	13.2	8.7	0.0	chr8	63284314	63284796	(81853840)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	3883039
3039	15.2	1.5	11.2	chr8	63284797	63285011	(81853625)	C	L1MA4A	LINE/L1	(319)	5984	5780	3883038
166	3.4	0.0	2.1	chr8	63285012	63285200	(81853436)	+	(TCCTT)n	Simple_repeat	1	189	(0)	3883040
3039	15.2	1.5	11.2	chr8	63285201	63285218	(81853418)	C	L1MA4A	LINE/L1	(524)	5779	5779	3883038
890	17.7	0.0	0.0	chr8	63285223	63285346	(81853290)	C	AluJo	SINE/Alu	(188)	124	1	3883041
3039	20.1	1.6	9.2	chr8	63285347	63285464	(81853172)	C	L1MA4A	LINE/L1	(524)	5779	5672	3883038
27	0.0	0.0	0.0	chr8	64695604	64695629	(80443007)	+	(T)n	Simple_repeat	1	26	(0)	3884810
16	23.2	0.0	2.1	chr8	66712880	66712926	(78425710)	+	(GGCGG)n	Simple_repeat	1	47	(0)	3887940
2449	16.4	3.7	1.1	chr8	68306713	68307161	(76831475)	+	LOR1b	LTR/ERV1	1	461	(0)	3890522
4034	15.7	2.2	0.4	chr8	68307170	68307878	(76830758)	C	MER50	LTR/ERV1	(12)	722	1	3890523
1658	15.2	3.2	3.9	chr8	69772259	69772541	(75366095)	+	AluJr	SINE/Alu	21	301	(11)	3892547
14	5.0	0.0	0.0	chr8	69772542	69772562	(75366074)	+	(GGAG)n	Simple_repeat	1	21	(0)	3892548
108	1.0	0.0	0.0	chr8	69772564	69772662	(75365974)	+	(GAAAG)n	Simple_repeat	1	99	(0)	3892549
2130	12.0	3.9	1.7	chr8	75104771	75105071	(70033565)	C	AluSg	SINE/Alu	(1)	309	2	3900533
216	1.0	0.9	0.9	chr8	75105072	75105282	(70033354)	+	(CCTTT)n	Simple_repeat	1	213	(0)	3900534
1011	17.6	1.1	0.6	chr8	75105290	75105465	(70033171)	C	AluSp	SINE/Alu	(0)	313	137	3900535
16	3.7	3.3	3.2	chr8	75105532	75105561	(70033075)	+	(GTTTT)n	Simple_repeat	1	31	(0)	3900536
3039	14.3	0.8	0.4	chr8	83317861	83318353	(61820283)	+	LOR1a	LTR/ERV1	1	495	(2)	3911744
13	27.4	0.0	4.0	chr8	83318453	83318502	(61820134)	+	(CCCTCT)n	Simple_repeat	1	50	(0)	3911745
526	29.6	8.0	6.7	chr8	86325638	86325896	(58812740)	+	L2c	LINE/L2	3116	3385	(2)	3915878
35	7.8	0.0	1.7	chr8	86326055	86326107	(58812529)	+	(TCCTC)n	Simple_repeat	1	52	(0)	3915881
87	0.0	2.1	2.1	chr8	86326108	86326200	(58812436)	+	(TTCCT)n	Simple_repeat	1	95	(0)	3915882
1588	14.4	4.2	4.2	chr8	86326228	86326490	(58812146)	C	AluJo	SINE/Alu	(49)	263	1	3915883
2016	22.0	2.8	3.2	chr8	87075298	87075758	(58062878)	+	LOR1b	LTR/ERV1	1	459	(2)	3916966
13	28.3	5.4	1.3	chr8	94720070	94720143	(50418493)	+	(GGCGGT)n	Simple_repeat	1	78	(0)	3927428
2524	17.0	6.9	0.2	chr8	97381322	97381751	(47756885)	C	LOR1b	LTR/ERV1	(0)	461	1	3931634
12	16.1	5.7	0.0	chr8	100158300	100158334	(44980302)	+	G-rich	Low_complexity	1	37	(0)	3936264
12	11.2	3.2	3.1	chr8	100158641	100158671	(44979965)	+	(ATGTGG)n	Simple_repeat	1	32	(0)	3936265
21	21.2	3.3	6.3	chr8	100722185	100722276	(44416360)	+	GA-rich	Low_complexity	1	95	(0)	3937327
13	28.1	1.7	3.3	chr8	100722203	100722314	(44416322)	+	G-rich	Low_complexity	1	110	(0)	3937328
1682	17.2	11.2	0.9	chr8	100997475	100997809	(44140827)	C	LOR1b	LTR/ERV1	(0)	461	88	3937940
2420	16.4	3.2	0.5	chr8	100997801	100998195	(44140441)	C	LOR1b	LTR/ERV1	(26)	435	29	3937941
12	32.5	0.0	6.3	chr8	102653750	102653828	(42484808)	+	GA-rich	Low_complexity	1	79	(0)	3940819
13	23.3	4.5	4.3	chr8	102653794	102653859	(42484777)	+	G-rich	Low_complexity	1	69	(0)	3940820
18	19.6	1.8	3.5	chr8	102653859	102653914	(42484722)	+	(GCGCGG)n	Simple_repeat	1	57	(0)	3940821
3569	10.1	0.8	3.5	chr8	102703825	102704255	(42434381)	+	LOR1a	LTR/ERV1	67	495	(2)	3940933
780	16.3	0.2	4.6	chr8	102704256	102704318	(42434318)	+	FLAM_C	SINE/Alu	63	116	(17)	3940932
1736	23.2	4.7	5.8	chr8	102704336	102704475	(42434161)	C	L1MC5a	LINE/L1	(261)	2516	2374	3940931
3361	11.4	0.8	0.0	chr8	102736391	102736883	(42401753)	+	LOR1a	LTR/ERV1	1	497	(0)	3941010
50	2.2	0.0	0.0	chr8	102736971	102737017	(42401619)	+	(CA)n	Simple_repeat	1	47	(0)	3941011
1787	16.5	5.0	4.2	chr8	102989174	102989508	(42149128)	+	MER1B	DNA/hAT-Charlie	2	339	(0)	3941540
3206	13.3	0.0	7.1	chr8	102989509	102989779	(42148857)	+	LOR1a	LTR/ERV1	232	497	(0)	3941537
30	0.0	0.0	0.0	chr8	102989804	102989831	(42148805)	+	(TGT)n	Simple_repeat	1	28	(0)	3941541
1208	16.8	0.0	2.5	chr8	102989834	102990030	(42148606)	C	AluJb	SINE/Alu	(29)	283	92	3941542
2287	13.7	9.6	0.8	chr8	104279077	104279465	(40859171)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	3943464
2358	14.6	7.8	2.5	chr8	104279466	104279865	(40858771)	C	LOR1b	LTR/ERV1	(29)	432	1	3943461
2877	14.8	1.8	0.8	chr8	110227889	110228380	(34910256)	+	LOR1a	LTR/ERV1	1	497	(0)	3951877
5988	12.1	1.7	2.1	chr8	111100437	111101394	(34037242)	+	LTR13_	LTR/ERVK	1	954	(0)	3953076
1630	18.1	1.2	0.8	chr8	117973521	117973779	(27164857)	+	AluJb	SINE/Alu	35	294	(18)	3962470
121	2.5	0.8	0.8	chr8	117973785	117973911	(27164725)	+	(GAAAG)n	Simple_repeat	1	128	(0)	3962471
58	5.5	0.0	0.0	chr8	117973913	117973988	(27164648)	+	(GGAA)n	Simple_repeat	1	76	(0)	3962472
4747	10.0	1.8	4.8	chr8	123422578	123423176	(21715460)	C	L1P4	LINE/L1	(935)	5211	4623	3971830
77	14.5	4.7	6.2	chr8	123423194	123423425	(21715211)	+	(CTTC)n	Simple_repeat	1	243	(0)	3971834
638	21.9	6.1	0.0	chr8	123423445	123423567	(21715069)	C	FLAM_C	SINE/Alu	(8)	135	5	3971835
416	28.6	10.6	5.8	chr8	123423607	123423866	(21714770)	C	Charlie23a	DNA/hAT-Charlie	(15)	324	51	3971836
249	28.0	9.6	0.0	chr8	123667324	123667398	(21471238)	C	L2c	LINE/L2	(12)	3414	3332	3972343
2971	14.6	1.0	1.6	chr8	123667550	123668049	(21470587)	C	LOR1a	LTR/ERV1	(0)	497	1	3972344
2320	18.3	7.6	0.2	chr8	123894049	123894475	(21244161)	+	LOR1b	LTR/ERV1	1	461	(0)	3972727
1795	20.3	5.9	1.4	chr8	123894558	123894927	(21243709)	+	L1MC4	LINE/L1	6690	7077	(965)	3972731
1156	21.1	13.7	2.2	chr8	126597831	126598225	(18540411)	C	L1MD2	LINE/L1	(176)	6566	6148	3977829
1355	20.5	0.8	0.4	chr8	126598226	126598485	(18540151)	C	LOR1a	LTR/ERV1	(0)	497	237	3977830
2451	9.0	0.0	0.3	chr8	130215462	130215772	(14922864)	+	AluY	SINE/Alu	1	310	(1)	3984586
1886	15.6	0.3	5.3	chr8	130215773	130215946	(14922690)	+	AluJb	SINE/Alu	132	305	(7)	3984585
48	17.2	6.6	2.1	chr8	130215958	130216093	(14922543)	+	A-rich	Low_complexity	1	145	(0)	3984587
185	27.9	0.0	0.0	chr8	130216340	130216382	(14922254)	+	MIR3	SINE/MIR	103	145	(63)	3984588
1838	18.6	12.6	0.2	chr8	136135177	136135580	(9003056)	+	LOR1b	LTR/ERV1	1	461	(0)	3995164
12041	12.8	3.9	8.6	chr8	140995810	140995935	(4142701)	+	Tigger1	DNA/TcMar-Tigger	533	655	(1763)	4002951
891	15.2	7.6	3.3	chr8	140995936	140996074	(4142562)	+	AluSz6	SINE/Alu	134	291	(21)	4002956
29	0.0	0.0	0.0	chr8	140996075	140996102	(4142534)	+	(AAAAC)n	Simple_repeat	1	28	(0)	4002957
891	15.2	7.6	3.3	chr8	140996103	140996113	(4142523)	+	AluSz6	SINE/Alu	134	291	(21)	4002958
12041	12.8	3.9	8.6	chr8	140996114	140997657	(4140979)	+	Tigger1	DNA/TcMar-Tigger	656	2234	(184)	4002951
692	30.4	5.7	6.6	chr8	142699824	142700158	(2438478)	C	LTR43	LTR/ERV1	(140)	462	131	4005201
8255	6.4	0.4	0.1	chr8	143058136	143059139	(2079497)	C	LTR13	LTR/ERVK	(0)	1007	1	4005662
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
3750	17.9	3.2	5.4	chr8	143747179	143747910	(1390726)	C	L1M4	LINE/L1	(2808)	3338	2616	4006598
93	3.1	0.0	1.9	chr8	143747911	143748014	(1390622)	+	(TCCTT)n	Simple_repeat	1	104	(0)	4006601
1903	15.5	0.0	0.4	chr8	143748017	143748293	(1390343)	C	AluJb	SINE/Alu	(35)	277	2	4006602
3750	17.9	3.2	5.4	chr8	143748294	143748430	(1390206)	C	L1M4	LINE/L1	(3533)	2613	2479	4006598
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
983	19.0	4.8	0.0	chr8	144233153	144233368	(905268)	C	L1MB3	LINE/L1	(3)	6180	5954	4007362
1068	22.4	3.6	0.7	chr8	144233505	144233801	(904835)	C	L1MB3	LINE/L1	(183)	6000	5695	4007363
4403	17.7	13.5	2.6	chr9	5777499	5778699	(132616018)	C	L1MB7	LINE/L1	(944)	5202	3846	4017000
1745	20.0	0.7	0.0	chr9	5778700	5778989	(132615728)	C	AluJb	SINE/Alu	(20)	292	1	4017001
4403	17.7	13.5	2.6	chr9	5778990	5779047	(132615670)	C	L1MB7	LINE/L1	(2301)	3845	3785	4017000
15	18.7	0.0	0.0	chr9	6054352	6054383	(132340334)	+	GA-rich	Low_complexity	1	32	(0)	4017474
396	31.1	0.8	5.7	chr9	6054386	6054525	(132340192)	C	MLT1I	LTR/ERVL-MaLR	(257)	154	22	4017472
464	32.7	10.1	2.2	chr9	8823097	8823453	(129571264)	+	L2b	LINE/L2	2088	2475	(944)	4021620
1105	14.3	2.2	2.8	chr9	8823476	8823657	(129571060)	+	AluJb	SINE/Alu	108	288	(24)	4021621
34	5.5	5.1	1.6	chr9	8823658	8823723	(129570994)	+	(GGAAAG)n	Simple_repeat	1	68	(0)	4021622
3957	12.0	0.4	0.0	chr9	8823730	8824281	(129570436)	C	MER41A	LTR/ERV1	(0)	554	1	4021623
1834	19.2	8.7	4.1	chr9	10296241	10296679	(128098038)	+	LOR1b	LTR/ERV1	1	461	(0)	4023581
551	33.5	3.8	1.8	chr9	10296680	10296965	(128097752)	C	LTR101_Mam	LTR/ERVL	(505)	324	33	4023582
6253	11.7	2.5	3.9	chr9	12328857	12329878	(126064839)	C	LTR13	LTR/ERVK	(0)	1007	1	4026107
2088	17.7	4.2	1.4	chr9	13297081	13297515	(125097202)	C	LOR1b	LTR/ERV1	(13)	448	1	4027421
1436	10.5	0.0	0.0	chr9	13923477	13923667	(124471050)	C	LOR1a	LTR/ERV1	(0)	497	307	4028263
105	20.5	0.8	2.1	chr9	16539519	16539755	(121854962)	+	GA-rich	Low_complexity	1	239	(0)	4032060
128	9.1	2.9	0.9	chr9	16539677	16539883	(121854834)	+	(AGGAA)n	Simple_repeat	1	213	(0)	4032061
268	17.4	11.3	0.0	chr9	16539931	16540016	(121854701)	C	Tigger20a	DNA/TcMar-Tigger	(173)	800	704	4032062
14	15.4	6.7	2.1	chr9	19230372	19230416	(119164301)	+	(CCTC)n	Simple_repeat	1	48	(0)	4035923
265	13.6	0.0	0.0	chr9	31848876	31848919	(106545798)	+	MER61-int	LTR/ERV1	2	45	(5172)	4052928
184	8.8	5.6	5.6	chr9	31848920	31848955	(106545762)	+	Penelope1_Vert	LINE/Penelope	889	924	(163)	4052929
2178	18.4	4.8	1.4	chr9	31848956	31849401	(106545316)	+	MER61-int	LTR/ERV1	84	545	(4672)	4052928
3051	15.5	2.6	0.5	chr9	62838347	62838981	(75555736)	+	TAR1	Satellite/telo	1420	2068	(43)	4073704
415	28.0	2.0	1.0	chr9	63817237	63817537	(74577180)	+	LSAU	Satellite	1	303	(172)	4074767
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
253	26.1	0.0	0.0	chr9	70038639	70038703	(68356014)	+	MER102a	DNA/hAT-Charlie	90	154	(176)	4082516
2330	17.6	5.0	0.7	chr9	72049637	72050077	(66344640)	+	LOR1b	LTR/ERV1	1	461	(0)	4085759
207	28.9	16.8	1.2	chr9	72050181	72050341	(66344376)	C	MIR3	SINE/MIR	(8)	200	10	4085760
2198	14.6	3.2	5.8	chr9	72166996	72167409	(66227308)	+	LOR1b	LTR/ERV1	1	403	(58)	4085995
1762	8.0	3.6	0.5	chr9	76571733	76572034	(61822683)	+	LSU-rRNA_Hsa	rRNA	4695	5034	(1)	4092814
16	23.3	1.3	7.7	chr9	83622940	83623016	(54771701)	+	G-rich	Low_complexity	1	78	(0)	4103205
180	18.2	0.0	0.0	chr9	83623330	83623362	(54771355)	C	MIR3	SINE/MIR	(60)	148	116	4103206
364	30.2	8.8	4.4	chr9	89549059	89549352	(48845365)	C	L1ME3B	LINE/L1	(0)	6242	5935	4112640
2216	27.4	7.4	3.7	chr9	89549342	89550529	(48844188)	C	L1ME3B	LINE/L1	(941)	5205	3952	4112640
1651	13.3	1.6	0.0	chr9	92783401	92783648	(45611069)	C	LOR1b	LTR/ERV1	(0)	461	210	4117217
1787	13.4	0.4	3.4	chr9	92783676	92783943	(45610774)	C	AluSz	SINE/Alu	(52)	260	1	4117218
2214	19.0	5.4	2.0	chr9	93892623	93893067	(44501650)	+	LOR1b	LTR/ERV1	1	461	(0)	4118709
1594	20.3	1.7	1.7	chr9	93893068	93893304	(44501413)	+	MLT1A	LTR/ERVL-MaLR	124	355	(19)	4118708
1787	17.1	1.3	0.3	chr9	96712330	96712627	(41682090)	+	AluJb	SINE/Alu	12	312	(0)	4123375
17	19.2	0.0	3.9	chr9	96712628	96712674	(41682043)	+	A-rich	Low_complexity	1	45	(0)	4123376
2070	16.6	6.9	4.7	chr9	96712675	96713124	(41681593)	C	LOR1b	LTR/ERV1	(0)	461	1	4123377
2235	16.1	4.3	5.6	chr9	103601115	103601581	(34793136)	+	LOR1b	LTR/ERV1	1	461	(0)	4134562
16	23.9	3.9	1.9	chr9	103601780	103601830	(34792887)	+	(TC)n	Simple_repeat	1	53	(0)	4134563
317	26.0	7.7	1.0	chr9	128688587	128688683	(9706034)	C	MIR3	SINE/MIR	(57)	151	48	4181102
7458	8.9	1.9	2.0	chr9	132252084	132253091	(6141626)	C	LTR13	LTR/ERVK	(0)	1007	1	4188521
18	27.5	0.0	0.0	chr9	132582025	132582072	(5812645)	+	GA-rich	Low_complexity	1	48	(0)	4189187
13	14.7	2.3	6.8	chr9	132582520	132582562	(5812155)	+	(CCCT)n	Simple_repeat	1	44	(0)	4189188
451	31.8	8.1	4.5	chr9	135893200	135893471	(2501246)	+	L1MEg	LINE/L1	951	1235	(4980)	4193739
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
1832	19.4	5.9	1.5	chr9	137510809	137511210	(883507)	+	LTR13	LTR/ERVK	1	421	(586)	4195719
516	21.6	0.9	0.0	chr9	137511209	137511369	(883348)	+	LTR13	LTR/ERVK	313	421	(586)	4195720
506	22.2	0.9	0.0	chr9	137511368	137511528	(883189)	+	LTR13	LTR/ERVK	313	421	(586)	4195720
3504	16.1	0.8	0.5	chr9	137511527	137512175	(882542)	+	LTR13A	LTR/ERVK	316	966	(0)	4195721
2468	15.8	5.2	2.0	chrX	9151847	9152292	(146888603)	C	LOR1b	LTR/ERV1	(0)	461	1	4374286
2468	14.2	6.9	0.5	chrX	11675195	11675594	(144365301)	+	LOR1b	LTR/ERV1	39	460	(1)	4378408
10820	12.2	3.6	0.2	chrX	12127589	12129162	(143911733)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	4379063
2491	15.8	7.4	0.5	chrX	16556138	16556564	(139484331)	+	LOR1b	LTR/ERV1	3	461	(0)	4386210
922	23.6	1.5	6.4	chrX	16556565	16556625	(139484270)	C	L1ME3A	LINE/L1	(964)	5182	5129	4386208
1051	29.4	11.1	3.3	chrX	16556625	16557049	(139483846)	+	L1ME3E	LINE/L1	5535	5998	(244)	4386204
2212	10.2	0.0	3.2	chrX	24139710	24140024	(131900871)	C	AluSx1	SINE/Alu	(7)	305	1	4398926
28	0.0	0.0	0.0	chrX	24140033	24140059	(131900836)	+	(T)n	Simple_repeat	1	27	(0)	4398927
2011	16.3	10.7	0.5	chrX	24140061	24140430	(131900465)	+	LOR1b	LTR/ERV1	50	461	(0)	4398928
1873	12.5	2.9	1.3	chrX	24140431	24140739	(131900156)	+	LOR1-int	LTR/ERV1	1	314	(7806)	4398928
14	17.0	6.2	2.0	chrX	24693790	24693837	(131347058)	+	(GCGCG)n	Simple_repeat	1	51	(0)	4400023
2521	16.8	1.7	1.1	chrX	27077012	27077469	(128963426)	+	LOR1b	LTR/ERV1	1	461	(0)	4403267
2227	17.1	7.0	1.5	chrX	27103136	27103604	(128937291)	+	LOR1a	LTR/ERV1	1	497	(0)	4403314
225	30.7	12.2	0.0	chrX	27103659	27103759	(128937136)	+	MER91C	DNA/hAT-Tip100	1	115	(25)	4403315
2558	15.6	1.8	3.7	chrX	41261893	41262042	(114778853)	C	MER65C	LTR/ERV1	(297)	164	11	4423957
96	17.2	4.1	3.1	chrX	41262094	41262339	(114778556)	+	(CTTCC)n	Simple_repeat	1	256	(0)	4423958
1649	15.7	4.8	0.4	chrX	41262347	41262607	(114778288)	C	AluJb	SINE/Alu	(38)	274	2	4423959
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
2803	7.8	2.5	0.0	chrX	46305113	46305458	(109735437)	+	L1PA7	LINE/L1	5800	6154	(0)	4431934
2272	14.3	10.0	2.4	chrX	46305535	46305839	(109735056)	C	LOR1b	LTR/ERV1	(0)	461	122	4431935
2393	13.8	9.1	0.9	chrX	46378942	46379364	(109661531)	C	LOR1b	LTR/ERV1	(0)	461	1	4432050
2025	13.5	0.7	0.0	chrX	49139062	49139364	(106901531)	+	LTR42	LTR/ERVL	1	305	(190)	4437603
418	22.1	0.0	0.1	chrX	49139366	49139449	(106901446)	+	Harlequin-int	LTR/ERV1	5501	5574	(1322)	4437604
573	20.2	1.8	0.0	chrX	49139454	49139562	(106901333)	+	LTR42	LTR/ERVL	309	419	(76)	4437603
1676	19.1	14.0	1.5	chrX	49139563	49139966	(106900929)	C	LTR2	LTR/ERV1	(0)	463	1	4437605
11	29.7	1.6	3.2	chrX	69285842	69285902	(86754993)	+	A-rich	Low_complexity	1	62	(0)	4457939
1089	19.5	12.8	8.2	chrX	70463876	70464157	(85576738)	C	AluJo	SINE/Alu	(14)	298	2	4459721
1859	16.9	3.2	0.7	chrX	70464164	70464190	(85576705)	C	AluJb	SINE/Alu	(2)	310	284	4459722
84	1.1	0.0	4.1	chrX	70464191	70464287	(85576608)	+	(TTTCC)n	Simple_repeat	1	97	(0)	4459723
1859	16.9	3.2	0.7	chrX	70464288	70464561	(85576334)	C	AluJb	SINE/Alu	(29)	283	1	4459722
107	4.2	0.8	1.5	chrX	72039025	72039153	(84001742)	+	(CTTTC)n	Simple_repeat	1	130	(0)	4462579
886	16.1	3.5	1.0	chrX	72039260	72039453	(84001442)	C	L1ME3C	LINE/L1	(230)	5893	5695	4462580
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
1852	18.8	7.9	7.6	chrX	74343991	74344242	(81696653)	+	LTR55	LTR/ERVL?	286	531	(17)	4465489
699	26.6	8.9	1.4	chrX	105348297	105348513	(50692382)	+	MIR	SINE/MIR	28	262	(0)	4501418
2729	15.2	1.5	0.2	chrX	105348589	105349043	(50691852)	C	LOR1b	LTR/ERV1	(0)	461	1	4501419
4784	14.2	1.8	0.1	chrX	107909878	107910690	(48130205)	C	L1MA7	LINE/L1	(2)	6289	5463	4505036
2012	25.7	8.9	10.6	chrX	107910691	107910768	(48130127)	C	HAL1	LINE/L1	(1054)	1453	1382	4505032
79	0.0	0.0	0.0	chrX	107910769	107910838	(48130057)	+	(TTTCC)n	Simple_repeat	1	70	(0)	4505037
2012	25.7	8.9	10.6	chrX	107910839	107910880	(48130015)	C	HAL1	LINE/L1	(1126)	1381	1379	4505032
2116	11.8	0.0	0.0	chrX	107910881	107911152	(48129743)	C	AluSz	SINE/Alu	(39)	273	2	4505038
3912	26.7	8.4	1.8	chrX	110503344	110504981	(45535914)	+	L1MEc	LINE/L1	3259	5014	(1305)	4508518
77	11.7	5.1	1.2	chrX	110505049	110505205	(45535690)	+	(TTCCTT)n	Simple_repeat	1	163	(0)	4508519
2021	15.1	0.7	0.7	chrX	110505206	110505510	(45535385)	C	AluSg	SINE/Alu	(4)	306	2	4508520
1729	12.6	1.5	0.4	chrX	113978995	113979250	(42061645)	+	LOR1a	LTR/ERV1	239	497	(0)	4513476
1906	18.4	8.1	2.8	chrX	113979251	113979646	(42061249)	+	LOR1-int	LTR/ERV1	1	419	(7701)	4513476
1357	18.3	1.7	0.7	chrX	115916147	115916432	(40124463)	+	L1MA4A	LINE/L1	4442	4730	(2115)	4516137
3185	4.2	7.8	8.4	chrX	115916433	115916898	(40123997)	C	LTR2	LTR/ERV1	(0)	463	1	4516140
5443	15.8	0.2	0.1	chrX	116639704	116640557	(39400338)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	777	4516886
950	14.3	12.5	1.2	chrX	116640534	116640703	(39400192)	C	MSTA	LTR/ERVL-MaLR	(236)	192	1	4516887
289	29.8	3.0	0.6	chrX	118307699	118307860	(37733035)	C	L1ME3G	LINE/L1	(244)	680	515	4518934
2264	14.3	6.3	0.3	chrX	118307863	118308234	(37732661)	C	LOR1b	LTR/ERV1	(0)	461	66	4518935
822	24.9	2.1	0.0	chrX	118606739	118606923	(37433972)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	4519561
59	1.3	0.0	8.5	chrX	118607018	118607111	(37433784)	+	(TTCCT)n	Simple_repeat	1	94	(0)	4519562
2377	8.9	0.7	0.3	chrX	118607113	118607414	(37433481)	C	AluSx1	SINE/Alu	(9)	303	1	4519563
3471	11.7	0.0	0.2	chrX	118804807	118805304	(37235591)	+	LOR1a	LTR/ERV1	1	497	(0)	4519917
1966	19.9	1.7	5.5	chrX	118805305	118805865	(37235030)	+	L1MD1	LINE/L1	5409	5826	(416)	4519918
1374	21.6	10.5	2.9	chrX	123517147	123517417	(32523478)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	107	4526868
3366	12.6	0.6	0.4	chrX	123517418	123517912	(32522983)	C	LOR1a	LTR/ERV1	(1)	496	1	4526869
1284	21.6	6.5	0.9	chrX	134010482	134010803	(22030092)	+	LTR90A	LTR	636	976	(0)	4541948
2193	9.1	0.0	0.4	chrX	134924631	134924905	(21115990)	+	AluYf1	SINE/Alu	1	274	(37)	4543636
2266	19.4	1.4	2.9	chrX	134924906	134925355	(21115540)	C	LOR1b	LTR/ERV1	(18)	443	1	4543637
15	6.7	6.1	2.9	chrX	135521657	135521689	(20519206)	+	GA-rich	Low_complexity	1	35	(0)	4544493
30	26.9	0.9	3.6	chrX	135521835	135521944	(20518951)	+	(CTC)n	Simple_repeat	1	111	(0)	4544494
1401	20.5	9.2	2.2	chrX	136131052	136131379	(19909516)	+	Tigger7	DNA/TcMar-Tigger	1	329	(10)	4545464
2008	15.9	0.0	0.0	chrX	136131382	136131690	(19909205)	C	LOR1b	LTR/ERV1	(0)	461	153	4545465
1277	16.9	1.2	7.3	chrX	136131691	136131880	(19909015)	C	AluJr	SINE/Alu	(22)	290	118	4545466
27773	3.9	0.0	0.1	chrX	139989005	139995163	(16045732)	C	L1PA3	LINE/L1	(1)	6154	2	4551522
2797	11.9	3.0	0.9	chrX	141002791	141003240	(15037655)	C	LTR46	LTR/ERV1	(0)	460	1	4553136
4487	9.0	4.1	1.2	chrX	151128992	151129630	(4911265)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1761	4567160
2865	13.8	6.4	1.9	chrX	151129637	151130110	(4910785)	C	LOR1a	LTR/ERV1	(0)	497	1	4567161
33	0.0	0.0	0.0	chrX	151137340	151137367	(4903528)	+	(AC)n	Simple_repeat	1	28	(0)	4567172
15168	12.9	29.6	1.5	chrX	151137368	151137679	(4903216)	C	LOR1-int	LTR/ERV1	(7722)	398	1	4567164
2974	14.6	5.0	1.5	chrX	151137686	151138164	(4902731)	C	LOR1a	LTR/ERV1	(0)	497	1	4567173
239	32.5	3.5	9.3	chrX	154527120	154527302	(1513593)	+	MIRc	SINE/MIR	10	181	(87)	4572014
2497	16.8	4.3	1.3	chrX	154654643	154655089	(1385806)	+	LOR1b	LTR/ERV1	1	461	(0)	4572238
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056