1974	6.7	0.4	0.0	chr1	1018877	1019116	(247937306)	C	AluSx1	SINE/Alu	(71)	241	1	1288
860	15.2	0.8	0.0	chr1	1019128	1019259	(247937163)	C	AluJr4	SINE/Alu	(179)	133	1	1289
14	18.7	0.0	6.2	chr1	1335054	1335101	(247621321)	+	(CCAGCA)n	Simple_repeat	1	48	(0)	1600
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
372	23.5	7.5	0.7	chr1	1422514	1422650	(247533772)	C	LTR75	LTR/ERVL	(294)	268	122	1721
3836	13.6	5.4	0.8	chr1	1422773	1423374	(247533048)	+	MER41B	LTR/ERV1	4	634	(0)	1722
34	11.8	10.6	1.0	chr1	2526358	2526451	(246429971)	+	(GCCCGCC)n	Simple_repeat	1	104	(0)	3281
2372	9.4	0.0	0.0	chr1	7991539	7991836	(240964586)	C	AluSq2	SINE/Alu	(14)	299	2	10715
3536	14.0	4.2	3.4	chr1	8938289	8938749	(240017673)	+	LTR77	LTR/ERV1	1	472	(150)	12596
3684	10.8	0.9	7.1	chr1	8938750	8939344	(240017078)	C	LTR61	LTR/ERV1	(0)	559	2	12597
316	27.2	16.4	2.5	chr1	9234168	9234329	(239722093)	C	MIR	SINE/MIR	(9)	253	65	13218
2251	9.6	1.0	0.7	chr1	10318440	10318730	(238637692)	+	AluSq2	SINE/Alu	1	292	(21)	15559
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
768	7.9	0.0	5.0	chr1	11909807	11909926	(237046496)	C	U5	snRNA	(1)	115	2	18711
405	23.8	3.7	1.3	chr1	12078656	12078772	(236877650)	+	MIR	SINE/MIR	25	145	(63)	19107
551	19.7	19.0	0.0	chr1	12078863	12078994	(236877428)	C	MER5A1	DNA/hAT-Charlie	(0)	166	4	19108
18	19.8	0.0	4.0	chr1	12618036	12618085	(236338337)	+	(CGCT)n	Simple_repeat	1	50	(0)	20096
307	30.3	2.9	6.8	chr1	16440144	16440223	(232516199)	+	LTR103_Mam	LTR/ERV1?	373	453	(22)	27496
12	15.8	2.6	5.0	chr1	16440347	16440385	(232516037)	+	(AGGCAG)n	Simple_repeat	1	40	(0)	27498
2358	10.0	0.0	0.0	chr1	16620824	16621124	(232335298)	C	AluSc8	SINE/Alu	(10)	301	1	27833
293	37.7	1.4	0.0	chr1	16621175	16621312	(232335110)	C	MER91B	DNA/hAT-Tip100	(50)	140	1	27834
2802	15.3	1.1	7.7	chr1	17470154	17470521	(231485901)	C	MER34C_	LTR/ERV1	(214)	371	5	29477
195	18.4	5.0	0.0	chr1	18295187	18295224	(230661198)	+	MIR3	SINE/MIR	78	117	(91)	31334
305	31.4	9.5	5.1	chr1	18295311	18295622	(230660800)	C	L2a	LINE/L2	(0)	3426	3100	31335
272	20.6	1.4	5.6	chr1	18298314	18298385	(230658037)	C	MER39	LTR/ERV1	(634)	73	5	31343
275	20.5	8.2	3.7	chr1	23598345	23598425	(225357997)	C	L2b	LINE/L2	(0)	3375	3291	42839
2228	9.3	0.7	0.0	chr1	26408260	26408548	(222547874)	+	AluSz	SINE/Alu	1	291	(21)	49285
4205	10.1	8.8	0.3	chr1	27049501	27050089	(221906333)	C	LTR9B	LTR/ERV1	(0)	644	1	50797
295	32.3	2.4	4.6	chr1	27490708	27490837	(221465585)	+	MIRb	SINE/MIR	63	189	(79)	51854
2456	6.9	0.7	0.3	chr1	27490892	27491196	(221465226)	+	AluSp	SINE/Alu	3	308	(5)	51855
310	25.5	8.1	0.0	chr1	27937615	27937716	(221018706)	C	MIR3	SINE/MIR	(8)	200	90	52898
200	33.9	0.0	0.0	chr1	28105591	28105652	(220850770)	C	MIR	SINE/MIR	(83)	179	118	53252
3289	8.0	3.9	3.5	chr1	32641989	32642221	(216314201)	+	MER4E1	LTR/ERV1	1	224	(557)	63375
2450	9.8	0.0	0.0	chr1	32642222	32642528	(216313894)	+	AluSx1	SINE/Alu	1	307	(5)	63376
3289	8.0	3.9	3.5	chr1	32642529	32642767	(216313655)	+	MER4E1	LTR/ERV1	225	477	(304)	63375
295	25.0	13.1	2.3	chr1	33632976	33633151	(215323271)	+	L1ME4a	LINE/L1	5925	6122	(2)	65420
1873	16.9	16.6	5.5	chr1	34395955	34396326	(214560096)	+	MLT2B1	LTR/ERVL	1	456	(64)	66722
1416	2.4	0.0	0.0	chr1	34396327	34396491	(214559931)	+	L1PA5	LINE/L1	5982	6146	(8)	66723
11	14.9	4.9	4.7	chr1	37764624	37764664	(211191758)	+	(CTCCAC)n	Simple_repeat	1	43	(0)	73397
5339	8.6	1.0	0.0	chr1	38953090	38953772	(210002650)	+	LTR8	LTR/ERV1	2	691	(0)	75698
752	18.8	12.3	14.7	chr1	38953773	38953975	(210002447)	C	FLAM_C	SINE/Alu	(122)	180	1	75697
477	26.5	16.3	1.6	chr1	39893379	39893566	(209062856)	+	MIRb	SINE/MIR	9	229	(39)	77643
19	23.2	0.0	3.4	chr1	40979621	40979679	(207976743)	+	(CCCGC)n	Simple_repeat	1	59	(0)	79990
277	29.2	0.0	0.0	chr1	42344364	42344435	(206611987)	C	L2a	LINE/L2	(0)	3426	3355	82331
847	22.2	2.3	8.7	chr1	42344460	42344501	(206611921)	+	MIR	SINE/MIR	2	41	(221)	82332
2238	8.5	0.0	5.5	chr1	42344502	42344808	(206611614)	+	AluSq2	SINE/Alu	7	296	(17)	82333
9322	17.4	1.2	0.1	chr1	43840807	43842332	(205114090)	C	MSTA-int	LTR/ERVL-MaLR	(107)	1544	2	85020
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
581	20.9	3.5	0.0	chr1	44819555	44819664	(204136758)	C	AluSx3	SINE/Alu	(17)	294	181	86770
757	24.1	2.4	0.6	chr1	44819664	44819825	(204136597)	C	AluSx	SINE/Alu	(35)	277	113	86771
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
507	28.1	5.6	4.6	chr1	46442495	46442688	(202513734)	+	MIRb	SINE/MIR	46	241	(27)	90054
412	30.3	16.1	0.8	chr1	50279808	50280070	(198676352)	+	L2b	LINE/L2	3055	3365	(10)	96466
1678	17.9	1.1	2.1	chr1	50393434	50393718	(198562704)	C	AluJo	SINE/Alu	(30)	282	1	96701
2132	18.0	5.3	6.6	chr1	50393719	50394218	(198562204)	+	LTR54	LTR/ERV1	18	510	(0)	96702
1986	25.5	6.8	5.2	chr1	52975782	52976493	(195979929)	C	MER21C	LTR/ERVL	(97)	841	118	102232
8266	15.1	3.7	2.8	chr1	53432998	53434803	(195521619)	+	HERVH-int	LTR/ERV1	12	2150	(5563)	103078
4516	18.0	3.0	1.4	chr1	53448030	53448912	(195507510)	C	MER21C	LTR/ERVL	(40)	898	1	103102
15	19.6	2.4	0.0	chr1	54081546	54081566	(194874856)	+	(TTA)n	Simple_repeat	1	21	(0)	104374
7415	16.6	9.1	4.4	chr1	54960985	54963581	(193992841)	+	MER57-int	LTR/ERV1	5199	7816	(0)	106234
294	34.7	5.8	4.0	chr1	59077772	59077993	(189878429)	C	MIRb	SINE/MIR	(21)	247	22	114144
186	29.4	5.2	5.2	chr1	59078054	59078168	(189878254)	C	MIR	SINE/MIR	(29)	233	119	114145
2268	11.9	0.0	0.0	chr1	59814046	59814356	(189142066)	C	AluSx	SINE/Alu	(1)	311	1	115493
3817	6.4	6.9	1.7	chr1	61966704	61967134	(186989288)	C	MER41A	LTR/ERV1	(96)	458	1	119195
34086	5.6	0.8	0.8	chr1	62754825	62760515	(186195907)	+	HERV9NC-int	LTR/ERV1	1	5187	(931)	120771
44	18.1	3.0	1.0	chr1	63731200	63731289	(185225133)	+	GA-rich	Low_complexity	9	101	(0)	122593
648	24.8	0.6	0.6	chr1	63731400	63731557	(185224865)	+	MIRb	SINE/MIR	52	209	(59)	122594
12	10.3	6.1	2.9	chr1	64494020	64494052	(184462370)	+	G-rich	Low_complexity	1	35	(0)	123996
2289	10.4	0.0	0.3	chr1	64497845	64498141	(184458281)	+	AluSx	SINE/Alu	2	297	(15)	124001
1091	31.2	6.4	3.8	chr1	67097240	67097911	(181858511)	C	L2a	LINE/L2	(117)	3270	2575	128213
2555	23.9	9.7	1.9	chr1	70684531	70685510	(178270912)	C	L1PB4	LINE/L1	(4501)	2418	1302	133823
467	33.9	6.4	1.8	chr1	70685513	70685794	(178270628)	C	L1PB4	LINE/L1	(5290)	1629	1334	133823
3288	14.2	1.0	1.7	chr1	72000825	72001353	(176955069)	+	MER61E	LTR/ERV1	1	525	(44)	135645
3903	10.5	5.9	0.0	chr1	72034756	72035382	(176921040)	+	LTR9C	LTR/ERV1	1	666	(0)	135693
449	26.1	6.2	6.7	chr1	76230932	76231124	(172725298)	+	MLT1H	LTR/ERVL-MaLR	49	240	(309)	141129
2320	18.8	11.3	1.3	chr1	80181409	80181943	(168774479)	C	LTR49	LTR/ERV1	(0)	595	1	146823
772	21.3	3.8	5.1	chr1	81547591	81547861	(167408561)	C	LTR81AB	LTR/Gypsy	(1113)	280	18	148605
286	27.2	7.1	4.2	chr1	81549346	81549441	(167406981)	+	MIRc	SINE/MIR	45	143	(125)	148608
2324	11.2	0.0	0.3	chr1	81682850	81683162	(167273260)	+	AluSx1	SINE/Alu	1	312	(0)	148833
1065	24.5	7.5	5.5	chr1	81920367	81920785	(167035637)	+	LTR16	LTR/ERVL	1	428	(10)	149163
595	29.7	7.9	1.2	chr1	84478882	84479033	(164477389)	+	L2a	LINE/L2	3184	3349	(77)	152573
289	19.7	5.0	5.0	chr1	85411499	85411578	(163544844)	+	L2c	LINE/L2	3268	3347	(40)	154123
209	22.4	0.0	2.0	chr1	85411668	85411717	(163544705)	C	MamRTE1	LINE/RTE-BovB	(1951)	1861	1813	154127
772	24.9	2.1	6.8	chr1	85436922	85437222	(163519200)	+	MLT1F1	LTR/ERVL-MaLR	6	271	(284)	154161
2249	10.7	3.7	2.9	chr1	85437333	85437709	(163518713)	+	Tigger2a	DNA/TcMar-Tigger	2	381	(53)	154162
4445	23.2	10.3	6.3	chr1	88776124	88776462	(160179960)	C	L1M4	LINE/L1	(5393)	2124	1857	158962
2277	11.6	0.0	0.0	chr1	88776463	88776755	(160179667)	+	AluSz	SINE/Alu	6	298	(14)	158971
1590	19.3	2.5	0.6	chr1	89361736	89362053	(159594369)	+	MER74A	LTR/ERVL	4	327	(231)	159769
401	28.8	3.0	7.0	chr1	89362102	89362273	(159594149)	+	MER5B	DNA/hAT-Charlie	14	178	(0)	159770
1528	19.6	2.2	0.6	chr1	89457096	89457414	(159499008)	C	MER74A	LTR/ERVL	(231)	327	4	159875
1229	28.9	9.0	1.7	chr1	94395237	94395700	(154560722)	C	LTR33	LTR/ERVL	(2)	513	13	167721
1430	25.6	9.5	1.7	chr1	94688548	94689020	(154267402)	C	LTR33	LTR/ERVL	(1)	514	1	168141
5924	21.5	4.1	1.9	chr1	101650589	101654254	(147302168)	C	L1MA4	LINE/L1	(2792)	4770	1251	178309
25	24.6	0.0	0.0	chr1	101996930	101996989	(146959433)	+	(AGC)n	Simple_repeat	1	60	(0)	178764
375	28.9	1.6	2.4	chr1	103250506	103250629	(145705793)	+	LTR33A_	LTR/ERVL	26	148	(383)	180265
1085	26.0	2.6	4.2	chr1	103250652	103250964	(145705458)	+	LTR33A_	LTR/ERVL	222	529	(2)	180265
361	32.8	8.5	5.7	chr1	107867546	107867966	(141088456)	+	MamGypLTR3a	LTR/Gypsy	47	480	(501)	185997
17	19.6	0.0	5.8	chr1	110477574	110477625	(138478797)	+	(TCCC)n	Simple_repeat	1	52	(0)	190225
488	29.7	6.4	0.9	chr1	110477734	110478126	(138478296)	C	MamGypLTR1c	LTR/Gypsy	(308)	505	4	190224
254	22.9	0.0	0.0	chr1	110964569	110964616	(137991806)	C	LTR16A	LTR/ERVL	(398)	53	6	190950
6726	7.9	1.5	0.0	chr1	112826632	112827533	(136128889)	+	Harlequin-int	LTR/ERV1	1	916	(5980)	193844
26889	7.2	2.2	1.1	chr1	112827510	112831188	(136125234)	+	Harlequin-int	LTR/ERV1	1405	5125	(1771)	193844
4713	13.8	1.8	0.3	chr1	114036648	114037074	(134919348)	C	MER50	LTR/ERV1	(24)	710	282	195971
3539	5.8	0.0	0.7	chr1	114037075	114037525	(134918897)	+	LTR7	LTR/ERV1	1	448	(2)	195972
852	31.1	1.1	0.4	chr1	115546318	115546582	(133409840)	C	MER102c	DNA/hAT-Charlie	(64)	267	1	198345
250	21.9	13.5	0.0	chr1	116485712	116485775	(132470647)	+	MER63D	DNA/hAT-Blackjack	1	74	(987)	199773
408	14.8	0.0	0.0	chr1	116485780	116485840	(132470582)	+	MER63B	DNA/hAT-Blackjack	329	389	(47)	199774
3550	14.7	7.6	0.2	chr1	119325672	119326258	(129630164)	+	MER41B	LTR/ERV1	1	634	(0)	203973
2817	13.2	6.9	1.1	chr1	119340876	119341341	(129615081)	+	LTR36	LTR/ERV1	86	580	(31)	203993
19	26.9	0.0	2.9	chr1	120176851	120176920	(128779502)	+	(TATTTTA)n	Simple_repeat	1	70	(0)	205122
273	20.0	7.8	12.0	chr1	120176924	120177031	(128779391)	+	L2a	LINE/L2	3324	3426	(0)	205123
961	20.0	0.0	0.0	chr1	120942600	120942764	(128013658)	+	U1	snRNA	1	165	(0)	206303
1344	19.3	5.5	1.4	chr1	146035370	146035649	(102920773)	C	AluJb	SINE/Alu	(14)	298	7	211987
634	0.0	0.0	0.0	chr1	146035692	146035763	(102920659)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	211988
1391	13.4	6.5	6.5	chr1	146038261	146038383	(102918039)	+	AluJb	SINE/Alu	1	125	(187)	211994
2616	5.3	0.0	0.0	chr1	146038384	146038685	(102917737)	C	AluSg	SINE/Alu	(8)	302	1	211995
1391	13.4	6.5	6.5	chr1	146038686	146038852	(102917570)	+	AluJb	SINE/Alu	127	291	(21)	211994
674	0.0	0.0	0.0	chr1	146039401	146039474	(102916948)	+	tRNA-Lys-AAG	tRNA	1	74	(2)	211996
2118	6.1	9.8	0.0	chr1	146039617	146039893	(102916529)	+	AluSp	SINE/Alu	1	307	(6)	211997
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
2155	10.0	3.2	0.7	chr1	150255202	150255500	(98700922)	C	AluSz6	SINE/Alu	(0)	312	6	218640
1476	6.7	0.0	0.0	chr1	150634650	150634829	(98321593)	+	HERVK-int	LTR/ERVK	7262	7441	(95)	219502
225	22.1	2.5	17.2	chr1	150634830	150634922	(98321500)	+	SVA_E	Retroposon/SVA	853	931	(451)	219503
6775	10.1	1.6	0.9	chr1	150634924	150635885	(98320537)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	219504
367	21.6	1.9	5.6	chr1	151295433	151295540	(97660882)	C	MIR3	SINE/MIR	(24)	184	81	220915
4940	12.9	4.8	1.5	chr1	153122742	153123450	(95832972)	+	L1PBa	LINE/L1	327	1067	(5796)	223629
12	17.5	3.1	0.0	chr1	153958498	153958529	(94997893)	+	(CTCC)n	Simple_repeat	1	33	(0)	225133
16	24.8	0.0	3.6	chr1	153958537	153958592	(94997830)	+	(GCCGCC)n	Simple_repeat	1	56	(0)	225134
19	25.9	0.0	4.5	chr1	153958837	153958903	(94997519)	+	GA-rich	Low_complexity	1	67	(0)	225135
1821	6.6	2.9	1.2	chr1	157046776	157047016	(91909406)	+	AluSx	SINE/Alu	44	288	(24)	231180
858	13.4	1.5	0.0	chr1	157170735	157170868	(91785554)	C	AluJr4	SINE/Alu	(176)	136	1	231371
416	34.9	7.8	0.5	chr1	157171006	157171218	(91785204)	C	MIRb	SINE/MIR	(17)	251	22	231372
647	13.6	0.0	1.0	chr1	158999860	158999963	(89956459)	+	MSTB	LTR/ERVL-MaLR	32	134	(292)	233759
7096	8.0	14.6	0.5	chr1	159722880	159723940	(89232482)	C	MER11B	LTR/ERVK	(0)	1236	1	234657
213	30.2	0.0	0.0	chr1	159799455	159799507	(89156915)	C	MIR	SINE/MIR	(1)	261	209	234771
248	32.8	10.5	1.5	chr1	159900673	159900802	(89055620)	+	MER5A	DNA/hAT-Charlie	1	143	(46)	234920
449	31.9	7.1	1.1	chr1	160651940	160652123	(88304299)	C	MIRb	SINE/MIR	(65)	203	8	236078
6789	10.8	0.8	1.0	chr1	160652139	160653095	(88303327)	+	LTR5_Hs	LTR/ERVK	1	955	(13)	236079
2186	5.7	8.2	0.3	chr1	160981275	160981556	(87974866)	C	AluYf1	SINE/Alu	(5)	306	1	236616
2246	12.1	0.0	0.0	chr1	161220992	161221296	(87735126)	C	AluSq2	SINE/Alu	(7)	306	2	237101
2440	6.2	0.0	1.3	chr1	161764874	161765180	(87191242)	C	AluSx3	SINE/Alu	(8)	303	1	238071
2613	9.3	11.4	0.2	chr1	163596132	163596529	(85359893)	+	LTR7	LTR/ERV1	1	448	(2)	241002
364	8.7	0.0	0.0	chr1	163596553	163596598	(85359824)	C	MER4B-int	LTR/ERV1	(6712)	46	1	241003
2735	12.3	2.8	1.1	chr1	163596604	163597181	(85359241)	C	MER4E	LTR/ERV1	(5)	761	1	241003
832	25.1	6.5	2.2	chr1	165228234	165228510	(83727912)	+	LTR33A_	LTR/ERVL	239	528	(3)	243304
2177	11.1	0.3	1.0	chr1	167160990	167161295	(81795127)	C	AluSz	SINE/Alu	(8)	304	1	246246
4398	9.6	3.5	0.3	chr1	167161420	167162033	(81794389)	+	MER41B	LTR/ERV1	1	634	(0)	246247
2227	8.8	0.3	1.8	chr1	167267631	167267940	(81688482)	C	AluY	SINE/Alu	(0)	311	1	246449
654	0.0	0.0	0.0	chr1	167714725	167714796	(81241626)	+	tRNA-Pro-CCG	tRNA	1	72	(3)	247181
658	0.0	0.0	0.0	chr1	167715488	167715559	(81240863)	C	tRNA-Pro-CCY	tRNA	(3)	72	1	247182
405	23.7	12.0	6.6	chr1	167803571	167803751	(81152671)	C	MIR3	SINE/MIR	(8)	200	9	247340
3717	19.7	0.6	0.0	chr1	170488056	170488705	(78467717)	+	L1P4e	LINE/L1	2	655	(5636)	251368
310	30.1	7.0	4.9	chr1	171655755	171655939	(77300483)	+	L2c	LINE/L2	3199	3384	(3)	253102
17	16.9	1.9	5.7	chr1	173714998	173715049	(75241373)	+	GA-rich	Low_complexity	1	53	(0)	255989
1837	15.5	0.3	4.1	chr1	173860930	173861219	(75095203)	C	AluJr	SINE/Alu	(22)	290	12	256229
2523	8.1	0.7	0.3	chr1	173861307	173861604	(75094818)	+	AluSg	SINE/Alu	2	300	(10)	256230
3237	11.9	2.6	5.9	chr1	175832267	175832703	(73123719)	C	MER4B	LTR/ERV1	(0)	900	199	259284
2360	10.6	0.0	0.0	chr1	175832704	175833006	(73123416)	+	AluSx3	SINE/Alu	1	303	(8)	259285
211	27.5	3.6	2.4	chr1	175865694	175865775	(73090647)	C	MIR3	SINE/MIR	(17)	191	109	259352
532	29.0	3.4	1.8	chr1	179788512	179788744	(69167678)	+	MIRb	SINE/MIR	11	255	(13)	265304
21	7.5	0.0	0.0	chr1	181937016	181937043	(67019379)	+	(A)n	Simple_repeat	1	28	(0)	268642
527	11.4	0.0	0.0	chr1	181937260	181937338	(67019084)	C	L1PA15	LINE/L1	(265)	5900	5822	268643
718	33.7	10.7	3.2	chr1	182909768	182910138	(66046284)	C	L2	LINE/L2	(1329)	2090	1698	270250
3789	24.7	8.9	5.8	chr1	182910140	182910881	(66045541)	+	L1MB5	LINE/L1	47	834	(6683)	270252
2288	11.2	2.6	0.3	chr1	183321459	183321762	(65634660)	+	AluSz	SINE/Alu	1	311	(1)	270924
2040	11.2	3.6	6.2	chr1	183655948	183656348	(65300074)	+	MER57A-int	LTR/ERV1	5798	6187	(0)	271478
594	28.6	11.1	0.9	chr1	196878354	196878579	(52077843)	+	MIRb	SINE/MIR	17	268	(0)	289194
30	22.1	6.7	0.0	chr1	200039128	200039217	(48917205)	+	GA-rich	Low_complexity	1	96	(0)	293530
12	9.7	0.0	0.0	chr1	202010663	202010684	(46945738)	+	(CCTG)n	Simple_repeat	1	22	(0)	297034
581	30.9	17.0	1.3	chr1	202656724	202657110	(46299312)	C	L3	LINE/CR1	(34)	4065	3606	298262
2014	13.7	0.0	0.7	chr1	204303730	204304013	(44652409)	C	AluJb	SINE/Alu	(29)	283	2	301310
18	24.0	1.6	3.2	chr1	204828678	204828739	(44127683)	+	(GCG)n	Simple_repeat	1	63	(0)	302355
200	27.7	4.1	8.7	chr1	206506286	206506388	(42450034)	C	MIR3	SINE/MIR	(2)	206	109	305206
576	19.0	2.5	0.0	chr1	206506473	206506588	(42449834)	C	MER45A	DNA/hAT-Tip100	(0)	178	60	305207
15	20.4	0.0	0.0	chr1	211259202	211259230	(37697192)	+	(C)n	Simple_repeat	1	29	(0)	312388
3974	16.1	3.9	7.2	chr1	211399313	211400193	(37556229)	+	HERVK11-int	LTR/ERVK	1	851	(7102)	312644
12	24.1	0.0	0.0	chr1	212608883	212608916	(36347506)	+	(CCCGC)n	Simple_repeat	1	34	(0)	314847
1295	12.2	2.7	0.0	chr1	212852388	212852567	(36103855)	+	AluSz	SINE/Alu	9	193	(119)	315312
15	11.6	0.0	3.3	chr1	213051371	213051400	(35905022)	+	(GGC)n	Simple_repeat	1	30	(0)	315638
2044	22.1	5.8	2.4	chr1	215076262	215076798	(33879624)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	5	318624
13	0.0	0.0	4.8	chr1	215567283	215567303	(33389119)	+	(TCC)n	Simple_repeat	1	21	(0)	319244
12	15.8	0.0	3.3	chr1	215567376	215567405	(33389017)	+	(GGC)n	Simple_repeat	1	30	(0)	319245
18	20.5	1.9	3.6	chr1	215567559	215567612	(33388810)	+	(CCG)n	Simple_repeat	1	55	(0)	319246
411	27.9	14.2	6.8	chr1	216095396	216095733	(32860689)	C	L1MEj	LINE/L1	(1481)	679	313	319937
293	23.6	16.7	0.0	chr1	219660624	219660733	(29295689)	C	MIR3	SINE/MIR	(38)	170	39	324929
3820	24.2	3.3	1.5	chr1	219832502	219833590	(29122832)	C	L1MC3	LINE/L1	(6)	7779	6670	325225
226	26.6	18.6	0.0	chr1	220296537	220296615	(28659807)	C	MIRc	SINE/MIR	(169)	99	3	325994
573	5.3	0.0	0.0	chr1	222465005	222465079	(26491343)	+	tRNA-Thr-ACA	tRNA	1	75	(1)	329167
14	15.5	2.6	2.6	chr1	222712506	222712543	(26243879)	+	(CCGCC)n	Simple_repeat	1	39	(0)	329541
211	40.0	2.8	0.9	chr1	222906192	222906297	(26050125)	+	MamSINE1	SINE/tRNA-RTE	115	222	(68)	329880
3930	8.7	0.4	1.8	chr1	222906370	222906919	(26049503)	+	MER41A	LTR/ERV1	4	545	(9)	329881
15	12.1	5.3	2.5	chr1	225899220	225899257	(23057165)	+	(TCC)n	Simple_repeat	1	40	(0)	334772
282	25.4	2.7	0.0	chr1	225962681	225962751	(22993671)	C	MIR3	SINE/MIR	(72)	136	64	334901
2391	9.0	11.9	5.0	chr1	226850627	226850934	(22105488)	+	MER4-int	LTR/ERV1	2901	3238	(3360)	336583
4222	6.5	3.4	0.0	chr1	226850935	226851468	(22104954)	+	MER41A	LTR/ERV1	1	553	(1)	336588
588	26.9	7.7	1.0	chr1	232459853	232460047	(16496375)	C	MIRb	SINE/MIR	(34)	234	26	344972
3983	16.1	6.5	2.1	chr1	233730416	233731227	(15225195)	C	MER61-int	LTR/ERV1	(4367)	850	1	346827
15	0.0	0.0	5.0	chr1	234782761	234782780	(14173642)	+	(TG)n	Simple_repeat	1	20	(0)	348430
743	24.5	16.1	4.8	chr1	234913918	234914312	(14042110)	+	MLT1J	LTR/ERVL-MaLR	11	458	(54)	348652
193	21.7	0.0	8.0	chr1	235061241	235061290	(13895132)	+	MIR1_Amn	SINE/MIR	25	70	(160)	348949
17	18.8	0.0	0.0	chr1	237239110	237239140	(11717282)	+	(TA)n	Simple_repeat	1	31	(0)	352993
3404	12.1	12.9	0.0	chr1	237239203	237239764	(11716658)	C	LTR9D	LTR/ERV1	(0)	645	1	352994
11228	12.2	2.3	0.2	chr1	237286561	237289326	(11667096)	C	L1PBa1	LINE/L1	(3755)	3107	255	353077
783	30.5	7.8	4.8	chr1	238647862	238648300	(10308122)	+	MLT1G	LTR/ERVL-MaLR	38	520	(49)	354995
2630	12.6	5.7	3.1	chr1	242211188	242211670	(6744752)	+	LTR22B1	LTR/ERVK	1	496	(0)	360634
3713	13.5	10.8	1.7	chr1	242585627	242586635	(6369787)	+	MER51-int	LTR/ERV1	1	1101	(6715)	361207
201	33.3	7.4	1.4	chr1	244214224	244214363	(4742059)	C	MamRTE1	LINE/RTE-BovB	(3533)	279	131	363748
2334	16.4	1.6	2.4	chr1	244575648	244576316	(4380106)	C	HERVIP10FH-int	LTR/ERV1	(4257)	845	22	364377
841	12.3	1.6	0.7	chr1	244576338	244576488	(4379934)	C	LTR10E	LTR/ERV1	(0)	633	427	364377
1010	12.5	0.7	0.0	chr1	244576456	244576607	(4379815)	+	LTR10E	LTR/ERV1	481	633	(0)	364381
31	6.1	0.0	9.5	chr1	246435724	246435807	(2520615)	+	(CAAGAATTC)n	Simple_repeat	1	84	(0)	367452
1223	23.2	5.2	3.1	chr1	247295329	247295688	(1660734)	+	MER74B	LTR/ERVL	181	548	(74)	368919
2544	20.9	6.5	4.8	chr1	247374735	247374850	(1581572)	+	LTR8A	LTR/ERV1	1	124	(603)	369051
4700	11.6	2.3	2.2	chr1	247374851	247375540	(1580882)	+	LTR8	LTR/ERV1	1	691	(0)	369052
242	26.0	12.3	1.0	chr10	547599	547699	(133249723)	C	MIRc	SINE/MIR	(31)	237	124	371619
4690	14.6	2.9	5.1	chr10	2201525	2201961	(131595461)	C	MER4D	LTR/ERV1	(0)	903	475	373442
4966	12.7	5.4	3.2	chr10	2963940	2964791	(130832631)	+	MER4D0	LTR/ERV1	1	872	(0)	374416
571	25.4	11.4	2.7	chr10	5294020	5294395	(128503027)	C	LTR33A_	LTR/ERVL	(103)	428	16	377515
2253	20.4	6.2	4.0	chr10	5385164	5385568	(128411854)	+	LTR49	LTR/ERV1	39	456	(139)	377686
3705	10.2	0.4	3.0	chr10	5385569	5386103	(128411319)	+	MER41C	LTR/ERV1	1	521	(0)	377688
2817	9.4	1.1	0.5	chr10	6648750	6649122	(127148300)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	379834
669	26.7	0.0	0.0	chr10	6649235	6649384	(127148038)	C	MER5A1	DNA/hAT-Charlie	(4)	162	13	379835
460	26.3	7.7	5.5	chr10	11192742	11192906	(122604516)	C	MER5B	DNA/hAT-Charlie	(3)	175	7	386595
1182	24.2	8.4	8.8	chr10	13351308	13351579	(120445843)	+	MLT1C	LTR/ERVL-MaLR	182	459	(8)	390599
184	32.4	10.1	1.4	chr10	13351609	13351680	(120445742)	+	MER5A	DNA/hAT-Charlie	111	189	(0)	390601
199	26.0	13.5	0.0	chr10	14960106	14960201	(118837221)	C	MIR3	SINE/MIR	(34)	174	64	393370
324	33.0	9.5	7.4	chr10	16387005	16387153	(117410269)	+	MIRb	SINE/MIR	37	180	(88)	395704
636	24.1	0.0	17.1	chr10	16387154	16387271	(117410151)	+	Arthur1A	DNA/hAT-Tip100	4	114	(63)	395705
396	34.4	4.5	2.3	chr10	19828800	19829016	(113968406)	+	L2a	LINE/L2	2650	2871	(548)	401172
26	0.0	0.0	0.0	chr10	19829155	19829179	(113968243)	+	(T)n	Simple_repeat	1	25	(0)	401173
3827	14.5	2.3	0.6	chr10	20614787	20615419	(113182003)	+	LTR9D	LTR/ERV1	2	645	(0)	402288
4254	6.3	1.8	3.0	chr10	24222804	24223264	(109574158)	C	MER41A	LTR/ERV1	(98)	456	1	408141
16	15.5	2.8	0.0	chr10	28302635	28302681	(105494741)	+	(CGCCCC)n	Simple_repeat	1	48	(0)	414797
2118	11.5	0.3	0.0	chr10	29159308	29159595	(104637827)	C	AluSx	SINE/Alu	(13)	299	11	416410
1672	12.9	4.1	8.8	chr10	29159596	29159702	(104637720)	C	MER51B	LTR/ERV1	(228)	149	63	416409
286	11.1	0.0	5.3	chr10	29159695	29159751	(104637671)	C	MER51A	LTR/ERV1	(215)	162	109	416411
1682	15.7	1.3	2.5	chr10	29407217	29407755	(104389667)	+	MER57-int	LTR/ERV1	3914	4195	(3342)	416831
1704	17.5	3.8	0.0	chr10	31036090	31036369	(102761053)	C	AluJr	SINE/Alu	(21)	291	1	419730
994	19.1	0.0	0.0	chr10	32000793	32000939	(101796483)	C	AluJb	SINE/Alu	(29)	283	137	421146
426	15.5	1.4	0.0	chr10	32000947	32001017	(101796405)	C	MER2	DNA/TcMar-Tigger	(273)	72	1	421147
220	36.8	0.9	2.8	chr10	34186836	34186944	(99610478)	+	L2c	LINE/L2	3273	3379	(8)	424387
494	25.2	0.8	0.0	chr10	48537012	48537130	(85260292)	C	MamGypLTR3a	LTR/Gypsy	(766)	215	96	440673
251	26.4	0.0	0.0	chr10	51910086	51910138	(81887284)	C	L2b	LINE/L2	(2044)	1375	1323	445581
1802	18.2	1.8	10.1	chr10	51910145	51910620	(81886802)	C	MER67D	LTR/ERV1	(78)	436	1	445586
7410	19.0	10.0	4.4	chr10	52964419	52966071	(80831351)	C	MER52A	LTR/ERV1	(0)	1755	1	446989
1806	21.7	9.6	2.1	chr10	52966072	52966632	(80830790)	+	LTR48B	LTR/ERV1	34	642	(2)	446988
4299	17.9	3.0	2.9	chr10	52967182	52968079	(80829343)	C	MER4D1	LTR/ERV1	(0)	900	2	446990
1785	16.9	8.7	3.3	chr10	52968136	52968687	(80828735)	+	LTR24C	LTR/ERV1	7	633	(2)	446991
3101	12.3	10.1	4.1	chr10	53395494	53396052	(80401370)	C	LTR4	LTR/ERV1	(0)	596	1	447540
3023	16.0	13.2	1.8	chr10	53597652	53598327	(80199095)	C	MER4CL34	LTR/ERV1	(0)	765	1	447796
3654	13.0	2.0	7.3	chr10	55819823	55820503	(77976919)	C	LTR9B	LTR/ERV1	(0)	644	1	450659
516	33.6	7.3	4.0	chr10	55820504	55820673	(77976749)	+	HERVL74-int	LTR/ERVL	813	995	(4690)	450658
234	21.8	17.3	5.2	chr10	58964195	58964310	(74833112)	+	L2b	LINE/L2	3238	3370	(5)	454847
2553	7.1	0.0	0.3	chr10	59847058	59847352	(73950070)	C	AluY	SINE/Alu	(17)	294	1	456179
2937	19.7	8.1	6.3	chr10	60762268	60762688	(73034734)	+	L1MEc	LINE/L1	30	484	(5916)	457573
1917	14.8	21.7	2.7	chr10	60762689	60763098	(73034324)	+	MLT2B4	LTR/ERVL	1	519	(37)	457574
3005	13.8	13.5	2.1	chr10	61482649	61483270	(72314152)	+	MER39	LTR/ERV1	4	707	(0)	458638
461	25.4	2.4	0.0	chr10	63713145	63713266	(70084156)	C	MamRep1879	DNA/hAT-Tip100?	(84)	132	8	462297
2027	17.5	5.7	0.3	chr10	64430733	64431116	(69366306)	+	MLT1A1	LTR/ERVL-MaLR	1	406	(2)	463388
18	17.9	0.0	0.0	chr10	64431146	64431177	(69366245)	+	A-rich	Low_complexity	1	32	(0)	463389
4117	10.6	4.7	0.2	chr10	65348496	65349131	(68448291)	C	LTR9C	LTR/ERV1	(0)	666	1	464620
264	20.3	7.8	0.0	chr10	67788825	67788883	(66008539)	+	MER5B	DNA/hAT-Charlie	4	67	(111)	467887
2535	15.2	8.2	0.7	chr10	67789697	67790115	(66007307)	C	MER21B	LTR/ERVL	(414)	454	2	467888
2526	7.4	0.7	0.0	chr10	69508162	69508470	(64288952)	+	AluSx3	SINE/Alu	1	311	(0)	471749
2147	7.5	2.3	0.7	chr10	70383111	70383404	(63414018)	+	AluSx1	SINE/Alu	1	299	(13)	473337
190	19.1	6.7	0.0	chr10	70455773	70455814	(63341608)	C	MIRb	SINE/MIR	(34)	234	190	473505
422	26.2	10.0	0.8	chr10	70455888	70456014	(63341408)	C	MIRb	SINE/MIR	(102)	166	27	473505
465	32.4	11.0	3.1	chr10	75076331	75076655	(58720767)	C	LTR85c	LTR/Gypsy?	(353)	470	117	482371
1175	10.2	0.0	6.2	chr10	75076656	75076831	(58720591)	+	AluSx1	SINE/Alu	141	305	(7)	482372
1554	25.3	5.2	1.3	chr10	76082588	76083035	(57714387)	+	L1ME5	LINE/L1	5384	5849	(345)	484026
1121	22.8	4.9	1.2	chr10	76083044	76083511	(57713911)	+	MER74A	LTR/ERVL	1	594	(28)	484027
193	29.9	3.4	8.3	chr10	76103253	76103409	(57694013)	+	L3	LINE/CR1	3853	4001	(98)	484063
765	25.7	2.6	10.3	chr10	76149621	76149911	(57647511)	+	MamTip2	DNA/hAT-Tip100	30	297	(8)	484115
16	21.1	0.0	0.0	chr10	78303349	78303387	(55494035)	+	(CCTCC)n	Simple_repeat	1	39	(0)	487571
13	19.0	0.0	5.0	chr10	78303451	78303490	(55493932)	+	(CCGC)n	Simple_repeat	1	40	(0)	487572
13	14.7	0.0	3.1	chr10	82251285	82251316	(51546106)	+	(TCCTCT)n	Simple_repeat	1	32	(0)	493709
529	21.1	13.4	5.9	chr10	84665940	84666125	(49131297)	+	LTR50	LTR/ERVL	1	202	(593)	497179
1018	23.3	10.3	0.0	chr10	84666247	84666525	(49130897)	+	LTR50	LTR/ERVL	475	785	(10)	497179
1118	27.7	10.2	11.5	chr10	86856688	86857409	(46940013)	C	MER21C	LTR/ERVL	(122)	816	6	500291
1433	20.3	16.3	2.0	chr10	86857447	86857803	(46939619)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	152	500292
626	33.2	8.5	2.8	chr10	88114736	88115166	(45682256)	+	L2a	LINE/L2	2969	3426	(0)	502356
5927	12.8	17.3	2.0	chr10	89619864	89620931	(44176491)	+	MER11A	LTR/ERVK	1	1266	(0)	504679
5869	18.6	3.0	1.7	chr10	90136346	90138172	(43659250)	+	HUERS-P3b-int	LTR/ERV1	747	2884	(6035)	505432
2185	30.4	3.2	4.8	chr10	90318468	90319366	(43478056)	C	L2	LINE/L2	(2409)	1010	127	505668
1069	20.4	1.8	0.9	chr10	90394216	90394437	(43402985)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	505778
583	28.6	5.5	9.0	chr10	90925440	90925850	(42871572)	C	LTR82B	LTR/ERVL	(291)	539	144	506533
545	28.2	0.6	1.1	chr10	90925909	90926087	(42871335)	+	MER5B	DNA/hAT-Charlie	1	178	(0)	506535
3782	8.3	4.5	3.3	chr10	93283241	93283618	(40513804)	C	MER41A	LTR/ERV1	(167)	387	1	510816
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
890	27.4	12.1	6.5	chr10	94623653	94623796	(39173626)	+	MER77	LTR/ERVL	53	191	(413)	513366
1808	18.8	0.0	2.4	chr10	94623797	94624094	(39173328)	+	AluJo	SINE/Alu	1	291	(21)	513367
6821	9.1	13.7	1.5	chr10	95732607	95733689	(38063733)	C	MER11B	LTR/ERVK	(0)	1236	1	514812
271	26.8	8.9	3.4	chr10	96222371	96222488	(37574934)	+	MamTip2	DNA/hAT-Tip100	165	260	(45)	515575
318	20.2	19.3	3.7	chr10	96229886	96230054	(37567368)	+	MIR3	SINE/MIR	6	192	(16)	515593
22	24.1	1.4	2.7	chr10	96832658	96832729	(36964693)	+	(CCTCCC)n	Simple_repeat	1	73	(0)	516803
18	25.0	4.0	3.8	chr10	96832884	96832959	(36964463)	+	(CG)n	Simple_repeat	1	79	(0)	516804
11	16.5	5.9	0.0	chr10	96832966	96832999	(36964423)	+	(GAGGTG)n	Simple_repeat	1	36	(0)	516805
369	24.6	13.6	0.9	chr10	98447044	98447158	(35350264)	C	MIR3	SINE/MIR	(62)	146	15	519934
13	9.3	0.0	0.0	chr10	101818949	101818971	(31978451)	+	(TCAT)n	Simple_repeat	1	23	(0)	525733
312	26.6	6.6	9.3	chr10	101819018	101819314	(31978108)	C	L2c	LINE/L2	(108)	3267	2973	525734
19	4.3	0.0	0.0	chr10	102645212	102645235	(31152187)	+	(CA)n	Simple_repeat	1	24	(0)	527309
12	26.1	0.0	4.1	chr10	103966960	103967008	(29830414)	+	(CACCCCG)n	Simple_repeat	1	49	(0)	529996
747	27.8	4.6	0.4	chr10	109934600	109934827	(23862595)	+	MIRb	SINE/MIR	31	268	(0)	538627
282	21.8	0.0	0.0	chr10	109934877	109934931	(23862491)	C	MIR3	SINE/MIR	(3)	205	151	538628
4200	9.6	0.4	0.0	chr10	119687865	119688416	(14109006)	C	MER41A	LTR/ERV1	(0)	554	1	554382
927	26.4	19.1	2.6	chr10	119688417	119688428	(14108994)	+	L1MEg	LINE/L1	608	618	(5624)	554381
875	20.5	8.7	1.5	chr10	119688429	119688631	(14108791)	C	MER20	DNA/hAT-Charlie	(0)	219	1	554383
11874	11.9	1.1	0.4	chr10	120125137	120128408	(13669014)	C	L1PA10	LINE/L1	(3157)	3304	1	555177
361	29.7	1.7	2.5	chr10	121289822	121289863	(12507559)	C	MIR3	SINE/MIR	(14)	194	151	556930
514	26.4	8.7	7.8	chr10	121289864	121290056	(12507366)	C	MER117	DNA/hAT-Charlie	(1)	196	2	556931
3800	13.7	4.7	0.2	chr10	121890988	121891623	(11905799)	C	LTR9C	LTR/ERV1	(0)	666	1	557891
309	30.4	9.0	3.8	chr10	124469672	124469987	(9327435)	C	L2a	LINE/L2	(0)	3426	3028	561998
5330	19.6	4.7	1.2	chr10	127868729	127870955	(5926467)	C	L1PBa	LINE/L1	(3567)	3348	1023	566744
785	33.8	2.6	2.5	chr11	944525	944954	(134141668)	C	L2a	LINE/L2	(116)	3310	2873	574152
21	18.4	1.9	1.9	chr11	2891933	2891984	(132194638)	+	(TCCT)n	Simple_repeat	1	53	(0)	576286
15	21.4	0.0	0.0	chr11	2892199	2892236	(132194386)	+	(CTGGAGC)n	Simple_repeat	1	38	(0)	576287
421	29.1	7.8	4.1	chr11	4186782	4186978	(130899644)	+	MIRb	SINE/MIR	63	267	(1)	578500
30	0.0	0.0	0.0	chr11	4608721	4608749	(130477873)	+	(AAACA)n	Simple_repeat	1	29	(0)	578970
239	37.3	4.9	4.1	chr11	6352994	6353337	(128733285)	+	L2c	LINE/L2	3003	3349	(38)	581190
70	0.0	0.0	0.0	chr11	6385446	6385507	(128701115)	+	(AAGG)n	Simple_repeat	1	62	(0)	581242
2397	11.1	4.8	6.9	chr11	6385786	6386064	(128700558)	+	LTR23	LTR/ERV1	1	265	(172)	581243
3167	12.6	0.0	0.2	chr11	7910205	7910680	(127175942)	C	MER41B	LTR/ERV1	(159)	475	1	583239
486	13.6	5.8	0.0	chr11	7910681	7910761	(127175861)	C	LTR54B	LTR/ERV1	(412)	86	1	583240
3648	16.7	5.0	1.9	chr11	7969982	7970683	(127115939)	C	LTR8A	LTR/ERV1	(2)	725	1	583313
11	20.5	5.1	0.0	chr11	9461144	9461182	(125625440)	+	(CGGCTC)n	Simple_repeat	1	41	(0)	585847
23603	10.1	2.4	0.7	chr11	9982570	9985317	(125101305)	+	L1PA17	LINE/L1	253	3056	(3806)	586885
307	32.9	2.1	7.7	chr11	10352247	10352401	(124734221)	+	L2b	LINE/L2	3230	3375	(0)	587423
351	32.3	4.9	0.6	chr11	11735532	11735687	(123350935)	C	L2a	LINE/L2	(0)	3426	3264	589657
598	31.7	6.4	3.2	chr11	11735876	11736246	(123350376)	C	L2a	LINE/L2	(243)	3132	2749	589657
945	28.6	10.4	4.7	chr11	11876445	11876958	(123209664)	C	MLT1H1	LTR/ERVL-MaLR	(8)	547	1	589888
22	12.4	2.2	2.1	chr11	12377459	12377504	(122709118)	+	GA-rich	Low_complexity	1	47	(0)	590686
11	24.6	4.0	1.9	chr11	12377559	12377608	(122709014)	+	(AGCCGC)n	Simple_repeat	1	52	(0)	590687
11	14.8	4.9	4.7	chr11	13277392	13277432	(121809190)	+	G-rich	Low_complexity	1	43	(0)	592124
13	33.7	1.4	1.4	chr11	13277699	13277770	(121808852)	+	G-rich	Low_complexity	1	73	(0)	592125
385	20.6	2.1	1.1	chr11	15074580	15074672	(120011950)	C	MIR3	SINE/MIR	(70)	138	45	594897
3892	21.5	7.7	14.1	chr11	15551451	15553107	(119533515)	C	L1MC3	LINE/L1	(4966)	1542	1	595691
243	19.1	5.6	5.6	chr11	15845216	15845287	(119241335)	C	L2b	LINE/L2	(1)	3374	3303	596219
463	29.3	6.3	1.2	chr11	15845460	15845625	(119240997)	+	MamTip2	DNA/hAT-Tip100	123	297	(8)	596220
220	33.9	13.5	0.5	chr11	19772326	19772518	(115314104)	+	MIRb	SINE/MIR	43	264	(4)	602841
413	23.8	14.9	2.0	chr11	19772721	19772943	(115313679)	+	UCON132b	DNA/hAT-Tip100	2	240	(65)	602842
23460	9.9	1.5	1.1	chr11	20342379	20348768	(114737854)	+	L1PA8A	LINE/L1	2	6444	(2)	603768
1305	15.3	21.3	1.5	chr11	20966102	20966427	(114120195)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	604750
1011	19.5	4.4	4.3	chr11	22234760	22234975	(112851647)	+	MER92B	LTR/ERV1	165	370	(266)	606639
582	24.4	3.6	1.2	chr11	22235003	22235164	(112851458)	+	MER92B	LTR/ERV1	464	629	(7)	606639
539	26.9	9.5	1.7	chr11	28628710	28628902	(106457720)	+	MIRc	SINE/MIR	1	210	(20)	615819
21826	12.7	2.6	1.2	chr11	28787393	28793742	(106292880)	C	L1PA8A	LINE/L1	(0)	6446	2	616071
351	21.2	23.4	1.3	chr11	33162019	33162171	(101924451)	+	MIR	SINE/MIR	32	228	(34)	622924
840	25.6	1.6	10.7	chr11	37597849	37598128	(97488494)	C	MER21B	LTR/ERVL	(614)	254	1	630080
2917	17.9	3.5	7.4	chr11	38046616	38047334	(97039288)	C	LTR8	LTR/ERV1	(1)	690	1	630707
181	19.4	7.5	7.5	chr11	43880537	43880603	(91206019)	C	L3	LINE/CR1	(110)	3989	3923	639137
445	31.1	9.7	7.7	chr11	44467969	44468366	(90618256)	+	MLT1K	LTR/ERVL-MaLR	130	539	(56)	640173
6796	17.8	2.9	1.4	chr11	44671057	44672349	(90414273)	+	MSTA-int	LTR/ERVL-MaLR	339	1651	(0)	640579
4849	12.9	1.4	0.7	chr11	49296927	49297965	(85788657)	C	L1MA3	LINE/L1	(3180)	4385	3339	648827
6479	15.9	0.9	0.2	chr11	49297963	49298976	(85787646)	C	L1MA3	LINE/L1	(6225)	1340	320	648827
281	33.0	7.6	2.8	chr11	57205399	57205610	(77881012)	+	L2c	LINE/L2	3063	3285	(102)	653236
317	25.1	7.0	3.9	chr11	61567148	61567288	(73519334)	+	MIRc	SINE/MIR	44	198	(10)	660427
2144	14.1	8.4	2.9	chr11	61814447	61814862	(73271760)	C	LTR12B	LTR/ERV1	(226)	441	1	660878
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
20	8.1	2.3	4.5	chr11	63671527	63671569	(71415053)	+	(CGAGG)n	Simple_repeat	1	44	(0)	664137
1011	24.7	3.0	4.0	chr11	66694712	66694985	(68391637)	+	LTR41C	LTR/ERVL	1	271	(430)	670058
376	25.7	7.6	6.5	chr11	66694974	66695190	(68391432)	+	LTR41C	LTR/ERVL	436	635	(133)	670058
407	22.6	3.5	3.2	chr11	67006621	67006762	(68079860)	+	MLT1O	LTR/ERVL-MaLR	57	186	(486)	670708
5675	9.9	3.4	5.0	chr11	68694466	68695351	(66391271)	+	MER4D0	LTR/ERV1	1	872	(0)	673813
270	28.7	9.9	0.0	chr11	69700359	69700494	(65386128)	C	MER113B	DNA/hAT-Charlie	(82)	220	70	675529
17	0.0	4.0	0.0	chr11	69700767	69700791	(65385831)	+	(CCAGG)n	Simple_repeat	1	26	(0)	675530
442	25.1	9.7	5.1	chr11	72706065	72706261	(62380361)	+	L2b	LINE/L2	2687	2893	(526)	680432
289	30.3	9.0	3.4	chr11	72706249	72706395	(62380227)	+	L2b	LINE/L2	3016	3171	(216)	680432
70	0.0	0.0	0.0	chr11	73142812	73142871	(61943751)	+	(GT)n	Simple_repeat	1	60	(0)	681263
3983	7.7	0.2	0.6	chr11	73528190	73528712	(61557910)	+	MER41C	LTR/ERV1	1	521	(0)	682039
2114	12.9	0.0	0.0	chr11	75104998	75105283	(59981339)	+	AluSz	SINE/Alu	2	287	(25)	685339
18	19.6	1.7	5.1	chr11	75706476	75706533	(59380089)	+	(CCT)n	Simple_repeat	1	59	(0)	686604
336	33.5	14.8	0.0	chr11	75706665	75706831	(59379791)	+	MIRb	SINE/MIR	3	198	(70)	686605
679	6.0	0.0	0.0	chr11	75748533	75748616	(59338006)	+	AluY	SINE/Alu	1	84	(227)	686692
26936	2.0	0.0	0.1	chr11	75748617	75754649	(59331973)	+	L1PA2	LINE/L1	127	6155	(0)	686693
3156	14.2	6.3	0.8	chr11	77753256	77753495	(57333127)	+	LTR8A	LTR/ERV1	3	259	(468)	690522
1137	14.2	10.9	0.0	chr11	77753496	77753700	(57332922)	+	MER30	DNA/hAT-Charlie	1	230	(0)	690523
3889	8.5	4.2	0.0	chr11	86356605	86357135	(48729487)	+	MER41A	LTR/ERV1	1	554	(0)	705431
1392	23.8	11.5	7.3	chr11	88103679	88104345	(46982277)	+	LTR41C	LTR/ERVL	1	698	(3)	708067
18	8.6	5.1	2.4	chr11	89294312	89294350	(45792272)	+	(GTTT)n	Simple_repeat	1	41	(0)	709837
2432	15.2	6.6	2.5	chr11	93072088	93072599	(42014023)	C	MER34C_	LTR/ERV1	(4)	581	48	715079
1999	18.8	7.1	0.9	chr11	93089507	93089942	(41996680)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	1	715115
234	22.9	5.4	7.1	chr11	93089966	93090078	(41996544)	C	Charlie18a	DNA/hAT-Charlie	(53)	289	179	715116
620	37.4	7.2	7.0	chr11	93117655	93118016	(41968606)	+	LTR88a	LTR/Gypsy?	436	812	(4)	715151
15	8.8	0.0	0.0	chr11	93118069	93118092	(41968530)	+	(CAC)n	Simple_repeat	1	24	(0)	715154
1983	17.1	5.5	1.0	chr11	93118222	93118604	(41968018)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	8	715155
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
449	27.4	12.6	3.7	chr11	94604286	94604710	(40481912)	C	LTR85b	LTR/Gypsy?	(9)	814	358	717409
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
486	23.8	13.7	3.8	chr11	95152012	95152299	(39934323)	C	L2	LINE/L2	(472)	2947	2627	718201
2290	6.2	0.0	2.4	chr11	95152307	95152595	(39934027)	+	AluY	SINE/Alu	1	282	(29)	718202
1505	21.7	9.2	5.5	chr11	95378759	95379178	(39707444)	+	LTR16	LTR/ERVL	2	438	(0)	718541
4591	28.0	9.7	3.9	chr11	95904161	95904374	(39182248)	+	L2	LINE/L2	1657	1901	(1518)	719312
3250	10.3	11.0	0.8	chr11	95904375	95904871	(39181751)	+	MER41A	LTR/ERV1	1	554	(0)	719314
8940	18.4	1.2	0.5	chr11	97721061	97723241	(37363381)	+	L1PB1	LINE/L1	1	1644	(5219)	721565
2791	17.5	4.4	4.1	chr11	104403043	104403651	(30682971)	C	LTR36	LTR/ERV1	(0)	611	1	730799
7320	14.1	2.1	3.5	chr11	104492557	104493170	(30593452)	+	HUERS-P1-int	LTR/ERV1	4935	5518	(1080)	730928
2446	9.5	0.0	0.3	chr11	104493171	104493476	(30593146)	+	AluSc8	SINE/Alu	1	305	(6)	730930
273	30.7	0.9	5.8	chr11	104531002	104531122	(30555500)	+	ERVL-E-int	LTR/ERVL	5402	5516	(151)	730992
456	28.5	3.2	4.9	chr11	104531172	104531410	(30555212)	+	LTR50	LTR/ERVL	15	244	(524)	730995
652	20.3	1.3	8.9	chr11	104782405	104782572	(30304050)	C	MER5A1	DNA/hAT-Charlie	(0)	166	12	731379
2205	22.5	2.1	4.3	chr11	104782573	104783055	(30303567)	+	MER70A	LTR/ERVL	1	472	(0)	731380
10804	17.6	6.0	1.5	chr11	108647375	108650248	(26436374)	+	L1M1	LINE/L1	16	3744	(3821)	737189
9023	9.8	6.9	2.5	chr11	109105798	109106396	(25980226)	C	L1PB1	LINE/L1	(4934)	1929	1311	737874
3091	14.9	0.9	1.4	chr11	109106364	109106926	(25979696)	C	L1PB1	LINE/L1	(5668)	1195	636	737874
10919	13.0	1.3	0.1	chr11	109290040	109291649	(25794973)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	738116
233	35.8	10.9	6.2	chr11	109390722	109391030	(25695592)	C	L2c	LINE/L2	(11)	3364	3072	738279
637	20.4	6.8	2.7	chr11	111429015	111429194	(23657428)	C	L1MB4	LINE/L1	(0)	6180	6006	741365
688	15.3	2.2	3.0	chr11	111429218	111429352	(23657270)	C	LTR41B	LTR/ERVL	(623)	135	2	741366
317	26.4	6.2	3.2	chr11	111429354	111429447	(23657175)	C	MIR	SINE/MIR	(113)	149	53	741367
17	0.0	4.2	0.0	chr11	112408518	112408541	(22678081)	+	(TTTA)n	Simple_repeat	1	25	(0)	743101
1227	11.3	0.0	4.6	chr11	112677091	112677284	(22409338)	C	L1PBa	LINE/L1	(6423)	439	255	743481
1189	13.4	4.1	0.0	chr11	112677418	112677604	(22409018)	C	MLT2A2	LTR/ERVL	(86)	367	173	743482
317	17.3	17.4	0.0	chr11	112823003	112823083	(22263539)	C	UCON88	Unknown	(0)	112	15	743705
2064	17.3	6.5	3.9	chr11	114478078	114478541	(20608081)	C	MER67C	LTR/ERV1	(234)	477	1	746343
479	18.7	0.0	0.0	chr11	116687639	116687713	(18398909)	+	MER63D	DNA/hAT-Blackjack	308	382	(679)	749756
43	26.8	0.0	0.0	chr11	116687889	116687995	(18398627)	+	(CA)n	Simple_repeat	1	107	(0)	749757
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
191	20.4	4.3	16.2	chr11	120303275	120303379	(14783243)	C	MIR3	SINE/MIR	(7)	201	110	756319
267	35.1	9.3	2.0	chr11	120303363	120303612	(14783010)	C	L2	LINE/L2	(661)	2758	2489	756320
2474	3.9	0.4	0.0	chr11	120684717	120684996	(14401626)	C	AluYc	SINE/Alu	(18)	281	1	756985
1752	11.4	11.7	4.8	chr11	121236524	121236926	(13849696)	+	LTR14B	LTR/ERVK	3	607	(1)	757816
5090	6.5	1.1	0.4	chr11	121236928	121237620	(13849002)	+	HERVK14-int	LTR/ERVK	1	698	(5398)	757816
14799	12.6	1.9	2.0	chr11	121371141	121372561	(13714061)	C	PRIMA4-int	LTR/ERV1	(833)	7437	6017	758001
9643	13.7	6.0	0.5	chr11	121372611	121374163	(13712459)	C	PRIMA4-int	LTR/ERV1	(6625)	1645	1	758001
32	18.7	5.6	1.1	chr11	121801602	121801690	(13284932)	+	GA-rich	Low_complexity	1	94	(0)	758647
18	16.2	4.2	6.8	chr11	123528145	123528215	(11558407)	+	(ACTGGT)n	Simple_repeat	1	74	(0)	761732
1871	17.7	8.5	1.1	chr11	123742771	123743119	(11343503)	C	MLT2B2	LTR/ERVL	(38)	477	101	762088
1463	8.5	8.3	5.2	chr11	123743125	123743335	(11343287)	C	AluSx3	SINE/Alu	(6)	305	88	762089
15	21.2	0.0	4.3	chr11	126104728	126104774	(8981848)	+	(CTCTCC)n	Simple_repeat	1	47	(0)	765520
404	32.1	7.2	2.4	chr11	128593066	128593314	(6493308)	+	MIR	SINE/MIR	1	262	(0)	769117
1259	21.6	10.2	1.4	chr11	130378259	130378614	(4708008)	+	LTR48B	LTR/ERV1	170	560	(84)	771823
2112	11.2	1.0	0.0	chr11	130378695	130378981	(4707641)	C	AluSx1	SINE/Alu	(22)	290	1	771824
22	26.5	0.0	1.4	chr11	131691728	131691796	(3394826)	+	G-rich	Low_complexity	1	69	(0)	773658
12176	9.7	1.2	0.3	chr11	133853333	133855332	(1231290)	C	L1PB1	LINE/L1	(4588)	2275	254	776470
4123	8.7	2.0	0.0	chr11	134052301	134052843	(1033779)	C	MER41A	LTR/ERV1	(0)	554	1	776721
281	27.3	6.9	6.9	chr11	134731152	134731324	(355298)	C	hAT-16_Crp	DNA/hAT-Charlie	(178)	3268	3096	777585
1818	13.8	0.0	1.1	chr12	2395210	2395484	(130879825)	C	AluSz6	SINE/Alu	(6)	306	35	782155
477	26.2	17.7	6.5	chr12	4355584	4356224	(128919085)	C	L2a	LINE/L2	(11)	3415	2684	785389
23081	12.4	1.8	0.7	chr12	9170009	9176475	(124098834)	+	L1PA11	LINE/L1	12	7607	(2)	793511
1559	6.4	3.4	1.0	chr12	10411405	10411606	(122863703)	+	AluYj4	SINE/Alu	98	304	(7)	795208
3555	13.2	14.6	0.2	chr12	10457626	10458248	(122817061)	+	LTR9A1	LTR/ERV1	1	728	(0)	795262
2376	9.7	1.3	0.0	chr12	10674473	10674780	(122600529)	+	AluSx1	SINE/Alu	1	312	(0)	795512
14	22.7	2.0	3.9	chr12	11500684	11500733	(121774576)	+	(GCC)n	Simple_repeat	1	51	(0)	796566
1686	23.4	4.8	7.3	chr12	11608972	11609502	(121665807)	+	MER34C2	LTR/ERV1	35	551	(4)	796754
686	28.2	4.5	1.4	chr12	11609534	11609749	(121665560)	+	MER31-int	LTR/ERV1	34	256	(7951)	796754
507	28.7	10.1	3.8	chr12	13256147	13256490	(120018819)	+	LTR88b	LTR/Gypsy?	35	402	(435)	799598
724	26.4	8.7	12.5	chr12	13361977	13362704	(119912605)	C	LTR41C	LTR/ERVL	(3)	698	1	799754
13	14.1	7.3	2.3	chr12	13799690	13799730	(119475579)	+	GA-rich	Low_complexity	1	44	(0)	800327
13	9.3	0.0	0.0	chr12	13962709	13962731	(119312578)	+	(GGCG)n	Simple_repeat	1	23	(0)	800569
442	26.5	11.2	0.6	chr12	18752663	18752829	(114522480)	+	LTR16A	LTR/ERVL	140	326	(112)	807033
741	17.1	9.3	4.9	chr12	18752838	18753021	(114522288)	C	MER58C	DNA/hAT-Charlie	(1)	214	22	807034
825	28.9	5.9	6.3	chr12	19185274	19185698	(114089611)	+	MLT1K	LTR/ERVL-MaLR	162	584	(11)	807678
1153	32.2	10.2	4.2	chr12	20264724	20265323	(113009986)	C	LTR78B	LTR/ERV1	(405)	891	252	809421
600	26.6	15.7	0.5	chr12	23025883	23026093	(110249216)	C	MIRc	SINE/MIR	(2)	266	14	813049
2611	14.9	5.7	1.1	chr12	23026213	23026679	(110248630)	+	ERVL-int	LTR/ERVL	5268	5757	(0)	813050
2641	17.8	10.7	2.7	chr12	23585623	23586212	(109689097)	+	LTR9D	LTR/ERV1	1	643	(2)	813780
2203	9.9	4.2	0.3	chr12	23816204	23816497	(109458812)	C	AluSx3	SINE/Alu	(5)	306	1	814084
208	29.9	18.0	4.2	chr12	27243724	27243866	(106031443)	+	MIR3	SINE/MIR	30	196	(12)	819253
5344	12.4	1.3	3.5	chr12	27905124	27906037	(105369272)	C	MER4D	LTR/ERV1	(9)	894	1	820324
198	28.4	0.0	0.2	chr12	28190018	28190080	(105085229)	C	L2b	LINE/L2	(3)	3423	3320	820739
2047	13.9	0.0	0.7	chr12	32016739	32017033	(101258276)	C	AluSx1	SINE/Alu	(19)	293	1	826593
1341	25.8	5.3	2.8	chr12	32017034	32017337	(101257972)	C	LTR29	LTR/ERV1	(178)	444	137	826592
4983	11.6	19.4	1.7	chr12	32390330	32391256	(100884053)	C	LTR12D	LTR/ERV1	(123)	1131	1	827388
686	19.2	3.1	3.1	chr12	39123508	39123668	(94151641)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	520	831989
3274	14.1	0.6	0.4	chr12	39123699	39124219	(94151090)	+	MER41B	LTR/ERV1	4	525	(109)	831990
18466	15.1	1.3	1.2	chr12	40817502	40820062	(92455247)	C	L1PA10	LINE/L1	(3824)	2637	59	834220
2268	11.8	0.7	0.0	chr12	43272782	43273087	(90002222)	C	AluSx1	SINE/Alu	(4)	308	1	837848
851	28.6	14.9	1.6	chr12	44428541	44428924	(88846385)	C	L2a	LINE/L2	(8)	3418	2975	839430
579	18.6	4.5	2.3	chr12	44429004	44429135	(88846174)	C	MER5A1	DNA/hAT-Charlie	(2)	164	30	839431
9255	16.6	2.5	0.9	chr12	46668963	46670585	(86604724)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	2	842554
2403	5.2	1.0	2.6	chr12	48717145	48717452	(84557857)	+	AluSx3	SINE/Alu	1	303	(8)	845624
300	29.2	14.4	4.3	chr12	52903183	52903368	(80371941)	C	MIRb	SINE/MIR	(32)	236	29	853626
307	21.6	0.0	0.0	chr12	54683716	54683780	(78591529)	C	L2a	LINE/L2	(0)	3426	3311	856845
6518	11.2	14.2	1.4	chr12	56442735	56443835	(76831474)	+	MER11A	LTR/ERVK	1	1266	(0)	859546
254	20.6	3.1	3.1	chr12	56987948	56988012	(76287297)	+	L2c	LINE/L2	3283	3347	(40)	860520
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
23	16.1	5.9	2.8	chr12	65896510	65896577	(67378732)	+	(CTTTCT)n	Simple_repeat	1	72	(0)	873513
13	16.7	4.8	2.3	chr12	69470606	69470647	(63804662)	+	(GCTCCGG)n	Simple_repeat	1	44	(0)	879354
16	29.9	0.0	1.7	chr12	75207767	75207825	(58067484)	+	(CGG)n	Simple_repeat	1	59	(0)	887228
450	29.4	5.2	0.0	chr12	76101699	76101861	(57173448)	C	LTR79	LTR/ERVL	(0)	527	356	888625
332	28.0	6.0	3.1	chr12	76101916	76102044	(57173265)	C	LTR79	LTR/ERVL	(290)	237	105	888625
364	33.1	0.7	5.8	chr12	76102080	76102233	(57173076)	+	MLT1J1	LTR/ERVL-MaLR	3	148	(296)	888626
3862	11.5	0.0	1.1	chr12	80173186	80173739	(53101570)	C	MER41B	LTR/ERV1	(86)	548	1	894646
5298	10.1	0.5	0.8	chr12	80173744	80174513	(53100796)	C	MER41-int	LTR/ERV1	(11)	5935	5168	894646
19012	9.5	5.9	3.7	chr12	80785270	80788485	(52486824)	C	HERVH-int	LTR/ERV1	(4423)	3290	1	895474
2531	8.0	10.9	1.5	chr12	80788488	80788892	(52486417)	C	LTR7	LTR/ERV1	(2)	448	1	895474
273	33.3	2.5	2.5	chr12	81350296	81350415	(51924894)	C	L2a	LINE/L2	(14)	3412	3293	896269
207	34.9	11.4	3.9	chr12	81350589	81350847	(51924462)	C	L2a	LINE/L2	(465)	2954	2674	896269
5290	13.0	1.5	2.6	chr12	83954947	83955828	(49319481)	+	MER4D0	LTR/ERV1	1	872	(0)	899695
15	15.2	2.0	7.7	chr12	85280157	85280207	(47995102)	+	(TCCC)n	Simple_repeat	1	52	(0)	901404
3688	12.3	3.1	0.0	chr12	85946375	85946910	(47328399)	+	LTR12_	LTR/ERV1	3	555	(133)	902333
1082	24.2	24.0	2.4	chr12	91769600	91770013	(41505296)	C	MLT1C	LTR/ERVL-MaLR	(0)	505	1	910400
3084	18.4	6.3	5.5	chr12	93080074	93080794	(40194515)	C	LTR8A	LTR/ERV1	(0)	727	1	912680
458	25.3	8.9	4.4	chr12	93676929	93677110	(39598199)	C	L2a	LINE/L2	(109)	3317	3127	913951
219	33.7	3.9	1.0	chr12	94010665	94010763	(39264546)	C	MIRb	SINE/MIR	(164)	104	3	914491
769	11.5	31.8	0.0	chr12	95857239	95857408	(37417901)	+	MER51A	LTR/ERV1	1	224	(410)	918024
1291	12.2	5.1	2.4	chr12	95857405	95857614	(37417695)	+	MER51A	LTR/ERV1	419	634	(0)	918024
2905	22.4	7.6	0.9	chr12	97097593	97098332	(36176977)	+	L1MEc	LINE/L1	34	826	(5574)	920151
26296	4.6	0.2	0.1	chr12	97603218	97609364	(35665945)	C	L1PA4	LINE/L1	(3)	6152	1	920925
2692	18.1	1.2	3.4	chr12	98344594	98344974	(34930335)	+	MLT2B1	LTR/ERVL	1	383	(137)	922030
2919	7.3	0.3	0.0	chr12	98344975	98345328	(34929981)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	922031
1795	17.7	2.7	1.9	chr12	104414395	104414756	(28860553)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	932524
1781	27.3	2.7	1.0	chr12	104414757	104415227	(28860082)	+	LTR82A	LTR/ERVL	68	589	(283)	932523
12	15.5	3.5	0.0	chr12	106133488	106133516	(27141793)	+	A-rich	Low_complexity	1	30	(0)	935679
717	24.7	1.7	1.7	chr12	106133521	106133697	(27141612)	+	MIRb	SINE/MIR	84	260	(8)	935680
24	7.5	2.2	4.3	chr12	107225727	107225772	(26049537)	+	(GGA)n	Simple_repeat	1	47	(0)	937669
477	31.3	5.4	4.9	chr12	109572739	109573107	(23702202)	+	MamRep4096	DNA/hAT-Tip100	1	371	(55)	942773
381	40.3	0.2	0.2	chr12	109661263	109662833	(23612476)	+	(ACT)n	Simple_repeat	1	1575	(0)	942999
2532	5.3	2.3	0.0	chr12	112387630	112387932	(20887377)	+	AluY	SINE/Alu	1	310	(1)	949079
2095	10.9	1.0	2.3	chr12	112387937	112388240	(20887069)	+	AluSx	SINE/Alu	13	312	(0)	949080
2333	8.4	0.0	1.6	chr12	113358085	113358392	(19916917)	+	AluSx	SINE/Alu	1	303	(9)	951393
35	5.0	0.0	0.0	chr12	119156612	119156652	(14118657)	+	(CCGGAG)n	Simple_repeat	1	41	(0)	964111
48	5.5	0.0	0.0	chr12	119156703	119156759	(14118550)	+	(AGCCGG)n	Simple_repeat	1	57	(0)	964112
236	17.7	9.0	4.1	chr12	120430689	120430762	(12844547)	C	L2a	LINE/L2	(15)	3372	3277	967056
2239	7.5	1.7	0.7	chr12	120430807	120431100	(12844209)	C	AluSc8	SINE/Alu	(14)	297	1	967057
1551	13.6	9.5	4.2	chr12	124130439	124130599	(9144710)	C	AluJo	SINE/Alu	(128)	184	1	975516
2981	6.7	0.0	0.0	chr12	124630905	124631291	(8644018)	+	MER41A	LTR/ERV1	1	387	(167)	976442
2433	8.2	0.3	0.0	chr12	124926845	124927147	(8348162)	+	AluSg	SINE/Alu	1	304	(6)	977164
659	0.0	0.0	0.0	chr12	124927345	124927416	(8347893)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	977165
262	29.5	0.0	1.1	chr12	132711408	132711496	(563813)	+	Charlie5	DNA/hAT-Charlie	22	109	(2515)	989826
1938	10.5	4.0	2.7	chr12	132711506	132711801	(563508)	+	AluJo	SINE/Alu	1	300	(12)	989827
1999	10.7	0.0	2.5	chr13	20943862	20944141	(93420187)	+	AluSx1	SINE/Alu	40	312	(0)	995175
348	25.0	10.6	5.9	chr13	21124112	21124264	(93240064)	C	LTR67B	LTR/ERVL	(268)	235	75	995559
2383	3.3	0.0	7.2	chr13	21124352	21124657	(93239671)	+	AluYc	SINE/Alu	1	284	(15)	995560
3052	15.2	6.3	3.6	chr13	24821882	24822410	(89541918)	C	LTR9	LTR/ERV1	(37)	575	28	1000851
2077	14.6	0.7	0.0	chr13	24822411	24822719	(89541609)	C	AluSx	SINE/Alu	(1)	311	1	1000852
2074	17.1	12.6	1.4	chr13	26475275	26475766	(87888562)	C	MER74A	LTR/ERVL	(0)	558	4	1003312
234	31.2	6.8	10.4	chr13	26475767	26475993	(87888335)	C	L2a	LINE/L2	(552)	2867	2653	1003309
4218	10.6	11.8	3.5	chr13	26785434	26786198	(87578130)	C	LTR1A2	LTR/ERV1	(0)	837	1	1003795
364	29.2	18.6	4.2	chr13	26972053	26972335	(87391993)	C	L2c	LINE/L2	(0)	3387	3055	1004085
4395	7.4	0.5	0.0	chr13	28745911	28746461	(85617867)	C	MER41A	LTR/ERV1	(0)	554	1	1007275
2207	18.7	5.6	8.8	chr13	30052047	30052679	(84311649)	+	LTR36	LTR/ERV1	1	611	(0)	1009033
1765	17.2	3.7	0.9	chr13	30158303	30158643	(84205685)	C	MLT1A0	LTR/ERVL-MaLR	(12)	353	3	1009217
9662	12.5	3.9	0.9	chr13	30285632	30287205	(84077123)	+	THE1D-int	LTR/ERVL-MaLR	7	1629	(2)	1009399
412	32.5	25.1	2.1	chr13	32246334	32246780	(82117548)	C	L2c	LINE/L2	(186)	3201	2648	1012494
395	28.8	8.0	7.6	chr13	32414994	32415268	(81949060)	C	MLT1J	LTR/ERVL-MaLR	(1)	511	236	1012726
828	27.3	7.8	1.2	chr13	33818362	33818761	(80545567)	C	L2a	LINE/L2	(176)	3250	2806	1014882
229	29.1	10.0	4.9	chr13	34900426	34900548	(79463780)	C	LTR104_Mam	LTR/Gypsy	(1318)	191	62	1016462
335	28.1	6.6	4.1	chr13	34900702	34901015	(79463313)	C	L2a	LINE/L2	(23)	3403	2990	1016463
5196	11.6	1.8	3.0	chr13	36762015	36762156	(77602172)	C	MER4D1	LTR/ERV1	(703)	197	55	1019009
3190	14.9	6.9	2.1	chr13	36762157	36762738	(77601590)	C	LTR9	LTR/ERV1	(0)	612	1	1019011
223	32.3	10.5	0.2	chr13	37595667	37595797	(76768531)	C	MIRb	SINE/MIR	(17)	251	102	1020200
4290	8.0	0.2	0.9	chr13	40649908	40650465	(73713863)	C	MER41A	LTR/ERV1	(0)	554	1	1024444
277	29.8	3.5	1.2	chr13	42573727	42573811	(71790517)	C	MIR3	SINE/MIR	(29)	179	93	1027568
12	25.3	1.8	5.2	chr13	42574018	42574074	(71790254)	+	GA-rich	Low_complexity	1	58	(0)	1027569
1420	27.8	9.7	3.0	chr13	43131996	43132456	(71231872)	+	LTR16D1	LTR/ERVL	160	673	(2)	1028461
678	20.3	3.4	0.7	chr13	43140900	43141043	(71223285)	C	MER5A1	DNA/hAT-Charlie	(2)	164	17	1028475
30	5.6	0.0	0.0	chr13	49443740	49443776	(64920552)	+	(ACC)n	Simple_repeat	1	37	(0)	1038412
400	31.3	2.9	1.5	chr13	51633296	51633431	(62730897)	+	MIR	SINE/MIR	4	141	(121)	1041899
460	24.8	0.0	0.0	chr13	53254754	53254858	(61109470)	C	L1MA10	LINE/L1	(0)	6334	6230	1044384
5728	13.3	13.3	0.9	chr13	54069682	54070762	(60293566)	C	MER11B	LTR/ERVK	(0)	1236	1	1045475
6961	8.8	1.0	0.2	chr13	54266807	54267766	(60096562)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	1045697
5456	12.0	4.1	2.6	chr13	54357610	54358203	(60006125)	+	MER4D1	LTR/ERV1	1	627	(273)	1045794
881	11.4	0.0	1.5	chr13	55000873	55001005	(59363323)	+	MER41C	LTR/ERV1	1	131	(390)	1046610
1239	17.1	4.1	0.0	chr13	55000997	55001207	(59363121)	+	LTR1B1	LTR/ERV1	599	818	(0)	1046611
10115	29.0	3.8	1.7	chr13	55227875	55230860	(59133468)	+	ERVL-E-int	LTR/ERVL	5	3055	(2612)	1046909
3848	17.2	2.5	1.7	chr13	55675107	55675821	(58688507)	C	MER72	LTR/ERV1	(0)	722	2	1047470
8461	18.9	1.4	1.9	chr13	56166092	56167731	(58196597)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	1048047
1755	22.6	17.7	4.4	chr13	56304110	56304702	(58059626)	C	MER76	LTR/ERVL	(0)	691	3	1048178
5884	12.8	13.2	0.6	chr13	58949241	58950315	(55414013)	+	MER11B	LTR/ERVK	1	1232	(4)	1051400
1658	16.6	2.8	14.6	chr13	59447911	59448354	(54915974)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	1052116
618	19.2	3.7	2.5	chr13	59479745	59479904	(54884424)	+	MER5A1	DNA/hAT-Charlie	5	166	(0)	1052159
5218	22.2	5.5	3.6	chr13	61315560	61317361	(53046967)	C	L1MA4	LINE/L1	(4488)	3077	1251	1054622
8204	19.4	2.8	1.8	chr13	61607524	61609045	(52755283)	C	MSTB-int	LTR/ERVL-MaLR	(112)	1539	1	1054982
2037	21.7	6.8	1.6	chr13	69580170	69580618	(44783710)	C	MER54A	LTR/ERVL	(17)	884	411	1064957
865	14.6	0.7	1.5	chr13	73718475	73718611	(40645717)	+	AluSz	SINE/Alu	1	136	(176)	1070978
2018	14.2	0.3	0.3	chr13	73718612	73718899	(40645429)	+	AluJb	SINE/Alu	2	289	(23)	1070979
13	16.0	5.7	0.0	chr13	74027074	74027108	(40337220)	+	(AATAG)n	Simple_repeat	1	37	(0)	1071388
5377	12.9	3.0	1.6	chr13	75699432	75700491	(38663837)	C	MER11B	LTR/ERVK	(5)	1066	1	1073786
1835	14.2	0.0	0.4	chr13	78430223	78430490	(35933838)	C	HERVP71A-int	LTR/ERV1	(7315)	275	9	1077521
3990	8.6	6.6	0.5	chr13	78430498	78431070	(35933258)	C	LTR71B	LTR/ERV1	(0)	610	1	1077521
445	27.6	2.6	16.3	chr13	78972485	78972791	(35391537)	+	Charlie8	DNA/hAT-Charlie	1	264	(2164)	1078275
485	27.7	3.6	1.0	chr13	79197947	79198130	(35166198)	C	MIRc	SINE/MIR	(75)	193	3	1078582
3185	15.9	6.9	2.3	chr13	81875095	81875787	(32488541)	+	LTR8A	LTR/ERV1	1	727	(0)	1082078
865	31.5	2.3	2.3	chr13	81990456	81990799	(32373529)	+	BLACKJACK	DNA/hAT-Blackjack	149	492	(2477)	1082205
451	29.4	0.0	0.0	chr13	81990844	81990952	(32373376)	C	MST-int	LTR/ERVL-MaLR	(742)	909	801	1082206
284	20.7	0.7	0.0	chr13	81991093	81991153	(32373175)	+	MER5A	DNA/hAT-Charlie	1	65	(101)	1082207
3092	28.3	7.1	4.0	chr13	84605705	84606848	(29757480)	C	L1MA4A	LINE/L1	(5666)	1183	2	1085461
358	28.5	9.6	3.1	chr13	84654689	84654897	(29709431)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	363	1085525
19	22.3	2.0	2.0	chr13	84654904	84654953	(29709375)	+	(TC)n	Simple_repeat	1	51	(0)	1085526
509	30.6	3.7	6.5	chr13	84654997	84655304	(29709024)	C	MLT1G3	LTR/ERVL-MaLR	(296)	299	1	1085525
863	17.7	0.6	0.0	chr13	85608288	85608445	(28755883)	+	HUERS-P3-int	LTR/ERV1	8753	8911	(8)	1086769
2802	12.0	11.0	0.6	chr13	85608446	85608940	(28755388)	+	LTR9B	LTR/ERV1	8	560	(84)	1086769
586	25.2	13.8	0.3	chr13	94825374	94825565	(19538763)	C	MIR	SINE/MIR	(9)	253	31	1098980
440	30.9	12.6	4.7	chr13	94996359	94996613	(19367715)	C	LTR33A_	LTR/ERVL	(129)	402	125	1099229
1999	8.8	0.0	0.8	chr13	95980752	95981000	(18383328)	+	AluSx	SINE/Alu	39	285	(27)	1100940
1576	22.9	1.1	2.9	chr13	96229329	96229705	(18134623)	C	MLT1A	LTR/ERVL-MaLR	(4)	370	1	1101310
367	32.3	19.4	4.9	chr13	96229706	96230687	(18133641)	C	L2b	LINE/L2	(55)	3320	2152	1101309
1145	19.1	20.8	2.1	chr13	99607112	99607534	(14756794)	C	Charlie1b	DNA/hAT-Charlie	(0)	523	1	1106539
878	21.9	0.5	3.5	chr13	99796439	99796637	(14567691)	C	MIR	SINE/MIR	(10)	252	60	1106852
366	29.8	14.3	9.4	chr13	100129488	100130050	(14234278)	C	L1MEi	LINE/L1	(1600)	612	18	1107456
1226	26.3	9.6	5.4	chr13	102091206	102091916	(12272412)	+	LTR50	LTR/ERVL	1	794	(1)	1110277
2047	11.2	0.3	3.4	chr13	106797237	106797531	(7566797)	+	AluSx1	SINE/Alu	1	286	(26)	1116552
250	29.3	15.1	1.7	chr13	108618539	108618715	(5745613)	+	L2c	LINE/L2	3183	3387	(0)	1119029
222	35.5	11.4	0.0	chr13	108728285	108728408	(5635920)	C	MIRb	SINE/MIR	(122)	146	7	1119177
910	26.4	4.5	2.5	chr13	108728477	108728802	(5635526)	C	MLT1C	LTR/ERVL-MaLR	(83)	384	52	1119178
23	23.3	1.8	0.0	chr13	113860119	113860173	(504155)	+	GA-rich	Low_complexity	1	56	(0)	1125060
12	24.3	0.0	4.3	chr13	114234973	114235019	(129309)	+	G-rich	Low_complexity	1	47	(0)	1125385
1856	6.7	9.7	2.6	chr13	114280990	114281258	(83070)	+	AluSz	SINE/Alu	1	290	(22)	1125452
12	27.6	6.2	0.0	chr13	114314573	114314637	(49691)	+	(GCCGCCC)n	Simple_repeat	1	69	(0)	1125515
1211	18.9	6.9	1.8	chr14	20578090	20578402	(86465316)	+	L1MEc	LINE/L1	6089	6419	(620)	1128283
505	22.6	4.6	2.7	chr14	20578415	20578564	(86465154)	C	LTR55	LTR/ERVL?	(101)	447	295	1128288
563	0.0	0.0	18.0	chr14	20683273	20683361	(86360357)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	1128459
2422	8.2	0.0	0.0	chr14	21511634	21511936	(85531782)	C	AluSx3	SINE/Alu	(8)	303	1	1129889
1488	12.6	0.0	0.5	chr14	22829291	22829497	(84214221)	C	AluJb	SINE/Alu	(22)	290	85	1131798
1581	20.4	4.4	0.0	chr14	22962398	22962681	(84081037)	C	AluJb	SINE/Alu	(14)	298	2	1132051
294	26.4	7.8	3.6	chr14	23469077	23469186	(83574532)	C	MIR3	SINE/MIR	(49)	159	45	1132899
2152	10.9	0.0	5.0	chr14	23536858	23537178	(83506540)	+	AluSq	SINE/Alu	3	307	(6)	1133004
301	21.4	11.7	3.0	chr14	24943371	24943471	(82100247)	+	MLT1J	LTR/ERVL-MaLR	399	509	(3)	1134845
646	39.9	4.1	5.2	chr14	26730660	26731468	(80312250)	+	LTR104_Mam	LTR/Gypsy	503	1302	(207)	1137180
1282	28.2	5.5	3.5	chr14	28661237	28661757	(78381961)	+	L1MCc	LINE/L1	812	1343	(5080)	1139526
958	20.4	12.2	11.6	chr14	30484606	30485070	(76558648)	+	MER110A	LTR/ERV1	1	468	(0)	1141880
2466	5.9	1.3	0.3	chr14	34539860	34540162	(72503556)	C	AluSp	SINE/Alu	(7)	306	1	1148043
5154	11.1	5.0	3.4	chr14	34693173	34693995	(72349723)	+	LTR1A2	LTR/ERV1	1	837	(0)	1148450
628	23.4	2.4	5.8	chr14	37167293	37167365	(69876353)	C	MER5A1	DNA/hAT-Charlie	(0)	166	93	1152586
4559	11.1	3.9	5.1	chr14	37167366	37168065	(69875653)	+	LTR8	LTR/ERV1	1	691	(0)	1152587
312	31.1	6.8	3.5	chr14	38755255	38755424	(68288294)	+	HAL1b	LINE/L1	497	672	(1749)	1154615
309	21.6	9.3	2.2	chr14	38755462	38755551	(68288167)	+	HAL1b	LINE/L1	652	748	(1673)	1154615
3629	18.0	11.5	7.6	chr14	48561003	48562028	(58481690)	+	MER11C	LTR/ERVK	1	1071	(0)	1166879
6833	20.5	1.0	0.6	chr14	48562029	48562646	(58481072)	+	HERVIP10FH-int	LTR/ERV1	5242	5867	(1870)	1166878
2827	1.0	0.0	0.0	chr14	49586580	49586879	(57456839)	+	7SLRNA	srpRNA	1	300	(20)	1168209
2707	3.3	0.0	0.0	chr14	49853615	49853914	(57189804)	C	7SLRNA	srpRNA	(20)	300	1	1168757
2303	11.2	0.3	0.0	chr14	50401919	50402221	(56641497)	+	AluSx	SINE/Alu	2	305	(7)	1169921
22	10.1	0.0	0.0	chr14	51138290	51138321	(55905397)	+	(AC)n	Simple_repeat	1	32	(0)	1171019
1540	19.3	12.0	5.2	chr14	51138324	51138749	(55904969)	C	MLT2B1	LTR/ERVL	(61)	459	1	1171020
1749	17.3	1.0	2.4	chr14	51637997	51638291	(55405427)	+	AluJr4	SINE/Alu	2	292	(20)	1171788
12	28.2	1.5	4.5	chr14	53355698	53355762	(53687956)	+	GA-rich	Low_complexity	1	66	(0)	1174414
547	24.2	0.0	1.5	chr14	54367114	54367247	(52676471)	C	MER94	DNA/hAT-Blackjack	(1)	133	2	1175828
703	30.2	10.3	3.7	chr14	54367248	54367607	(52676111)	+	LTR88c	LTR/Gypsy?	15	419	(443)	1175829
2151	10.6	5.3	0.0	chr14	55440862	55441145	(51602573)	C	AluSx	SINE/Alu	(12)	300	1	1177691
252	15.4	0.0	0.0	chr14	55752702	55752740	(51290978)	C	MLT1G3	LTR/ERVL-MaLR	(323)	272	234	1178258
393	29.7	0.0	0.8	chr14	55752871	55752989	(51290729)	C	MIR3	SINE/MIR	(0)	208	91	1178259
670	24.9	11.5	7.3	chr14	56847187	56847502	(50196216)	+	MamRep605	LTR?	1	331	(518)	1179826
237	28.1	1.5	0.0	chr14	56847535	56847598	(50196120)	C	L2c	LINE/L2	(3)	3423	3359	1179827
308	30.6	3.5	8.8	chr14	56847677	56847916	(50195802)	C	L2c	LINE/L2	(192)	3195	2969	1179827
4023	19.6	4.3	6.2	chr14	57028980	57030035	(50013683)	C	L1MEc	LINE/L1	(5163)	1237	193	1180145
1625	19.9	3.2	0.7	chr14	57030036	57030311	(50013407)	C	AluJb	SINE/Alu	(29)	283	1	1180150
6625	22.6	4.6	2.1	chr14	61238262	61239281	(45804437)	C	MER21-int	LTR/ERVL	(2571)	1620	557	1186203
2743	8.9	6.6	0.3	chr14	61239282	61239662	(45804056)	C	MER48	LTR/ERV1	(0)	407	1	1186213
2100	21.5	5.6	4.8	chr14	61930569	61931066	(45112652)	+	MLT1D	LTR/ERVL-MaLR	3	504	(1)	1187286
15097	13.7	3.1	1.4	chr14	64058781	64061215	(42982503)	C	L1M1	LINE/L1	(5043)	2522	18	1190610
13	12.0	0.0	3.5	chr14	64186304	64186332	(42857386)	+	(CCCTC)n	Simple_repeat	1	29	(0)	1190821
2136	15.4	0.0	0.0	chr14	64391155	64391460	(42652258)	C	AluSz	SINE/Alu	(2)	310	5	1191207
4246	11.4	1.6	1.6	chr14	65926421	65927059	(41116659)	+	LTR9B	LTR/ERV1	6	644	(0)	1193892
214	29.5	3.7	12.2	chr14	68796433	68796579	(38247139)	C	MER5A	DNA/hAT-Charlie	(7)	182	49	1198275
498	24.9	9.0	0.8	chr14	68796625	68796769	(38246949)	+	MIRb	SINE/MIR	37	187	(43)	1198276
15768	21.8	3.7	4.4	chr14	70622319	70624566	(36419152)	+	L1M4	LINE/L1	1142	3393	(3348)	1201431
768	31.1	14.1	2.8	chr14	72621554	72622049	(34421669)	C	L2	LINE/L2	(558)	2861	2301	1204548
1337	21.9	11.5	2.2	chr14	72797050	72797418	(34246300)	+	MLT1H	LTR/ERVL-MaLR	138	545	(4)	1204834
14	9.9	2.8	5.4	chr14	74326240	74326275	(32717443)	+	A-rich	Low_complexity	1	37	(0)	1208273
554	31.0	0.6	0.0	chr14	76916974	76917131	(30126587)	+	MIR	SINE/MIR	103	261	(1)	1213201
2184	10.9	5.2	0.0	chr14	76961232	76961525	(30082193)	C	AluSx	SINE/Alu	(2)	310	1	1213303
5432	10.4	5.1	2.7	chr14	77337922	77338771	(29704947)	+	MER4D0	LTR/ERV1	2	872	(0)	1214013
17	11.7	0.0	0.0	chr14	77338772	77338783	(29704935)	+	(TA)n	Simple_repeat	1	12	(0)	1214014
528	23.3	1.6	3.2	chr14	80213552	80213675	(26830043)	+	L2a	LINE/L2	3305	3426	(0)	1218887
305	17.6	5.6	1.4	chr14	80213699	80213767	(26829951)	C	MER91C	DNA/hAT-Tip100	(30)	110	39	1218888
759	30.5	5.2	4.7	chr14	85131180	85131835	(21911883)	+	L1MA10	LINE/L1	1356	2375	(5114)	1225775
1835	18.9	0.0	4.6	chr14	86220894	86221243	(20822475)	C	MER1B	DNA/hAT-Charlie	(5)	334	1	1227306
1143	11.2	0.7	0.0	chr14	88551689	88551840	(18491878)	C	FRAM	SINE/Alu	(23)	153	1	1230604
351	22.9	1.9	6.2	chr14	88977785	88977896	(18065822)	+	MamRep564	Unknown	143	249	(108)	1231306
366	32.0	12.0	1.7	chr14	88978045	88978216	(18065502)	+	MER91A	DNA/hAT-Tip100	5	196	(0)	1231307
2025	19.3	4.8	3.9	chr14	89293310	89293741	(17749977)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	30	1231809
2168	10.7	0.0	0.4	chr14	89296657	89296936	(17746782)	C	AluSx1	SINE/Alu	(33)	279	1	1231813
247	22.0	0.0	0.3	chr14	90331510	90331569	(16712149)	C	MIRc	SINE/MIR	(62)	168	110	1233689
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
378	34.4	12.8	4.5	chr14	90495027	90495361	(16548357)	C	L2c	LINE/L2	(0)	3387	3021	1234032
5002	9.1	12.0	4.1	chr14	92750089	92750739	(14292979)	+	LTR12	LTR/ERV1	1	746	(80)	1238159
360	25.0	4.1	3.3	chr14	94397729	94397848	(12645870)	+	MIRc	SINE/MIR	3	123	(145)	1241078
3347	16.6	2.5	7.9	chr14	94397956	94398687	(12645031)	C	LTR8	LTR/ERV1	(0)	691	1	1241079
442	19.8	3.6	1.9	chr14	95576137	95576244	(11467474)	+	LTR81AB	LTR/Gypsy	10	119	(159)	1243282
629	5.5	0.0	0.0	chr14	95947866	95947938	(11095780)	C	AluSz6	SINE/Alu	(6)	306	234	1243987
970	10.7	1.4	1.4	chr14	95947939	95948078	(11095640)	C	AluSz	SINE/Alu	(150)	162	23	1243988
420	29.7	8.9	3.1	chr14	95948087	95948340	(11095378)	C	HAL1	LINE/L1	(1603)	904	635	1243981
231	27.7	13.3	0.0	chr14	96501687	96501796	(10541922)	C	L2c	LINE/L2	(0)	3426	3294	1245030
277	31.2	2.2	2.3	chr14	99274131	99274260	(7769458)	C	MIR3	SINE/MIR	(36)	172	46	1249760
48	15.6	1.1	0.0	chr14	99274710	99274797	(7768921)	+	(CCT)n	Simple_repeat	1	89	(0)	1249761
12	22.6	5.7	1.8	chr14	102087264	102087316	(4956402)	+	(CGCGCGC)n	Simple_repeat	1	56	(0)	1254194
12	18.4	5.4	0.0	chr14	102087355	102087391	(4956327)	+	(CCGCCCT)n	Simple_repeat	1	39	(0)	1254195
683	0.0	0.0	0.0	chr14	102317092	102317165	(4726553)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	1254658
210	36.5	4.0	3.3	chr14	104844036	104844185	(2199533)	+	OldhAT1	DNA/hAT-Ac	2576	2726	(122)	1258913
3808	9.4	4.5	0.0	chr15	24859595	24860123	(77131066)	C	MER41A	LTR/ERV1	(0)	554	1	1269381
12	13.9	0.0	0.0	chr15	24860214	24860237	(77130952)	+	(AAAT)n	Simple_repeat	1	24	(0)	1269382
263	18.9	1.9	0.0	chr15	25643145	25643197	(76347992)	C	Charlie23a	DNA/hAT-Charlie	(79)	260	207	1270281
237	32.3	5.9	0.0	chr15	25643265	25643360	(76347829)	C	Charlie23a	DNA/hAT-Charlie	(237)	102	1	1270281
3585	16.6	2.2	6.3	chr15	26789855	26790549	(75200640)	C	LTR12_	LTR/ERV1	(22)	666	1	1271900
233	28.2	9.9	3.0	chr15	29140054	29140221	(72850968)	+	LTR33A	LTR/ERVL	322	502	(18)	1275018
229	18.4	3.9	2.0	chr15	29890064	29890113	(72101076)	C	MamTip3	DNA/hAT-Tip100	(185)	315	265	1276191
671	31.5	11.7	0.0	chr15	29904154	29904455	(72086734)	C	L2b	LINE/L2	(509)	2910	2569	1276204
270	35.5	10.1	2.3	chr15	33844279	33844451	(68146738)	C	L2	LINE/L2	(955)	2464	2277	1281835
2254	11.5	4.5	3.5	chr15	34588273	34588649	(67402540)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1283072
616	28.4	3.2	11.9	chr15	35020463	35020750	(66970439)	+	MamTip3	DNA/hAT-Tip100	165	422	(78)	1283803
2426	5.6	0.0	3.0	chr15	35020751	35021055	(66970134)	+	AluY	SINE/Alu	2	297	(14)	1283804
729	1.2	0.0	0.0	chr15	40593825	40593906	(61397283)	C	tRNA-Ser-AGY	tRNA	(3)	82	1	1291509
2338	7.5	1.4	0.3	chr15	43826580	43826872	(58164317)	C	AluSq2	SINE/Alu	(17)	296	1	1297708
14	22.5	0.0	2.3	chr15	43826950	43826992	(58164197)	+	(GCCCC)n	Simple_repeat	1	43	(0)	1297709
18	0.0	0.0	0.0	chr15	55498594	55498613	(46492576)	+	(A)n	Simple_repeat	1	20	(0)	1315685
2496	6.3	0.3	1.9	chr15	55498624	55498939	(46492250)	+	AluSp	SINE/Alu	1	311	(2)	1315686
202	27.5	8.1	2.4	chr15	55800010	55800091	(46191098)	C	MIR3	SINE/MIR	(21)	187	101	1316225
390	24.4	17.8	1.3	chr15	55800133	55800286	(46190903)	C	MIRb	SINE/MIR	(15)	253	69	1316226
194	20.4	6.4	0.0	chr15	57385641	57385684	(44605505)	+	MIRb	SINE/MIR	130	176	(92)	1318621
1014	20.7	2.7	3.2	chr15	57385710	57385929	(44605260)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1318622
1726	15.6	3.4	2.8	chr15	62474361	62474649	(39516540)	+	AluJr	SINE/Alu	1	291	(21)	1326968
658	18.2	2.3	3.0	chr15	62549303	62549434	(39441755)	C	FLAM_C	SINE/Alu	(12)	131	1	1327081
47	2.2	0.0	0.0	chr15	62549476	62549522	(39441667)	+	(CCAT)n	Simple_repeat	1	47	(0)	1327082
184	35.2	9.7	4.9	chr15	62549524	62549807	(39441382)	C	L2b	LINE/L2	(25)	3350	3052	1327083
235	24.2	10.2	0.0	chr15	63601064	63601187	(38390002)	+	MIRc	SINE/MIR	23	171	(97)	1328846
706	12.5	0.0	1.8	chr15	65305005	65305116	(36686073)	+	AluSz	SINE/Alu	1	110	(202)	1332346
509	19.5	7.4	0.0	chr15	65305120	65305232	(36685957)	C	MER33	DNA/hAT-Charlie	(184)	140	19	1332347
235	17.5	0.0	0.0	chr15	65415610	65415649	(36575540)	C	MIR1_Amn	SINE/MIR	(77)	153	114	1332571
200	32.4	1.4	0.0	chr15	66706159	66706226	(35284963)	+	MIR3	SINE/MIR	46	114	(94)	1335302
283	30.3	1.8	5.1	chr15	66834925	66835036	(35156153)	+	MIR3	SINE/MIR	27	137	(93)	1335546
2255	19.6	4.5	8.9	chr15	66835366	66835952	(35155237)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	1335547
361	35.1	3.9	2.6	chr15	69086482	69086633	(32904556)	+	MIRb	SINE/MIR	70	223	(45)	1339598
624	27.4	7.4	7.4	chr15	70111202	70111243	(31879946)	+	LTR16A	LTR/ERVL	409	451	(0)	1341484
5826	10.1	2.9	0.6	chr15	74352830	74354142	(27637047)	+	MER51-int	LTR/ERV1	1791	3165	(4651)	1348696
2794	6.9	12.3	0.2	chr15	74354144	74354537	(27636652)	+	LTR7	LTR/ERV1	1	448	(2)	1348699
430	28.4	4.9	2.5	chr15	74760254	74760412	(27230777)	C	MLT1M	LTR/ERVL-MaLR	(402)	270	108	1349462
232	33.3	7.5	1.5	chr15	80242364	80242500	(21748689)	+	Charlie15a	DNA/hAT-Charlie	42	187	(37)	1359233
705	27.1	7.2	2.9	chr15	80242580	80242917	(21748272)	+	MER102c	DNA/hAT-Charlie	4	339	(2)	1359234
27547	2.2	1.1	0.0	chr15	83383652	83389616	(18601573)	+	L1PA2	LINE/L1	127	6155	(0)	1364549
198	33.6	12.8	2.5	chr15	83498567	83498810	(18492379)	+	L2	LINE/L2	2590	2862	(557)	1364723
752	7.5	0.0	0.0	chr15	88547001	88547093	(13444096)	C	MER41D	LTR/ERV1	(464)	93	1	1372571
1984	16.9	0.0	0.6	chr15	88983636	88983949	(13007240)	+	AluJo	SINE/Alu	1	312	(0)	1373387
2968	20.5	3.8	1.1	chr15	88985852	88986472	(13004717)	C	LTR9B	LTR/ERV1	(0)	644	7	1373392
669	0.0	0.0	0.0	chr15	89335073	89335145	(12656044)	+	tRNA-Arg-CGA_	tRNA	1	73	(3)	1374041
2265	11.0	0.3	0.0	chr15	90584238	90584536	(11406653)	C	AluSq	SINE/Alu	(13)	300	1	1376672
365	25.6	2.4	2.4	chr15	93477193	93477316	(8513873)	C	L2b	LINE/L2	(1)	3374	3251	1381713
188	31.0	14.1	5.8	chr15	100461122	100461347	(1529842)	+	MIRc	SINE/MIR	19	266	(2)	1391481
492	19.3	18.1	0.0	chr15	100461447	100461586	(1529603)	+	MIR	SINE/MIR	87	257	(5)	1391482
935	26.8	8.7	6.7	chr15	100933197	100933556	(1057633)	C	HAL1ME	LINE/L1	(905)	1560	1194	1392107
1521	23.1	6.3	3.2	chr15	101000445	101000887	(990302)	C	MLT1C	LTR/ERVL-MaLR	(9)	458	1	1392214
2085	11.7	0.0	2.9	chr16	690600	690908	(89647437)	C	AluSx1	SINE/Alu	(12)	300	1	1395078
182	15.4	11.9	1.9	chr16	807634	807686	(89530659)	C	MIR1_Amn	SINE/MIR	(77)	153	95	1395222
41	17.9	0.8	8.2	chr16	2214718	2214850	(88123495)	+	(CCG)n	Simple_repeat	1	134	(0)	1397044
551	33.3	3.8	2.4	chr16	2387093	2387430	(87950915)	C	L2	LINE/L2	(911)	2508	2166	1397332
635	0.0	0.0	0.0	chr16	3184131	3184204	(87154141)	C	tRNA-Pro-CCA	tRNA	(1)	74	1	1398679
18	3.8	3.7	0.0	chr16	3184218	3184244	(87154101)	+	(TGT)n	Simple_repeat	1	28	(0)	1398680
252	10.8	0.0	0.0	chr16	4767412	4767448	(85570897)	C	MLT1D	LTR/ERVL-MaLR	(224)	281	245	1401813
1460	9.6	19.4	0.0	chr16	4767449	4767677	(85570668)	+	AluSp	SINE/Alu	3	286	(27)	1401814
33	0.0	2.6	2.5	chr16	4767678	4767716	(85570629)	+	(AAAT)n	Simple_repeat	1	40	(0)	1401815
351	28.8	33.2	0.0	chr16	5071314	5071561	(85266784)	C	L1ME3A	LINE/L1	(4)	6169	5837	1402508
21	12.2	2.1	4.1	chr16	5071862	5071909	(85266436)	+	(TGC)n	Simple_repeat	1	49	(0)	1402509
610	25.6	4.6	4.6	chr16	5450839	5451076	(84887269)	+	MIRb	SINE/MIR	26	263	(5)	1403319
1027	27.0	9.7	6.4	chr16	9078898	9079336	(81259009)	C	MLT1J	LTR/ERVL-MaLR	(50)	462	8	1410539
364	32.8	6.8	2.0	chr16	9527885	9528080	(80810265)	+	MIRb	SINE/MIR	57	262	(6)	1411543
13	15.4	5.6	0.0	chr16	11315576	11315611	(79022734)	+	(CCCCCT)n	Simple_repeat	1	38	(0)	1415391
316	25.0	5.0	1.0	chr16	11315793	11315889	(79022456)	C	L1M5	LINE/L1	(461)	5663	5563	1415392
274	24.8	4.9	10.0	chr16	12148117	12148246	(78190099)	C	Charlie15a	DNA/hAT-Charlie	(15)	209	87	1417340
235	20.2	28.8	0.0	chr16	12803339	12803442	(77534903)	C	MIR	SINE/MIR	(114)	148	3	1418652
2400	12.1	2.5	0.3	chr16	12819642	12819997	(77518348)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1418705
2352	6.8	0.3	2.6	chr16	13216990	13217297	(77121048)	+	AluY	SINE/Alu	1	301	(10)	1419649
610	1.4	0.0	0.0	chr16	14285893	14285964	(76052381)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1421772
37	2.5	2.5	0.0	chr16	19879415	19879454	(70458891)	+	(CA)n	Simple_repeat	1	41	(0)	1434568
3252	11.8	7.0	0.2	chr16	19948689	19949198	(70389147)	+	LTR35A	LTR/ERV1	1	547	(0)	1434773
370	26.2	8.0	1.9	chr16	20944924	20944973	(69393372)	+	MIRb	SINE/MIR	35	84	(184)	1436772
4413	10.9	1.7	0.9	chr16	20944974	20945480	(69392865)	+	MER41B	LTR/ERV1	1	504	(130)	1436773
741	23.5	5.6	0.6	chr16	22680854	22681024	(67657321)	+	MIR	SINE/MIR	2	181	(81)	1440583
2275	8.3	0.7	0.0	chr16	22681132	22681419	(67656926)	+	AluSz	SINE/Alu	11	300	(12)	1440584
5752	24.2	6.1	3.2	chr16	22962164	22963554	(67374791)	C	MSTB1-int	LTR/ERVL-MaLR	(4)	1627	202	1441194
17	17.4	3.5	5.1	chr16	23149397	23149453	(67188892)	+	(AGCG)n	Simple_repeat	1	59	(0)	1441521
12	29.9	0.0	5.9	chr16	23596346	23596413	(66741932)	+	(CGG)n	Simple_repeat	1	68	(0)	1442647
1610	28.6	6.9	4.2	chr16	24178829	24179393	(66158952)	C	MLT1K	LTR/ERVL-MaLR	(13)	582	2	1444046
2134	14.2	0.7	0.0	chr16	24516635	24516944	(65821401)	C	AluJo	SINE/Alu	(0)	312	1	1444896
603	21.9	3.7	1.3	chr16	24517226	24517382	(65820963)	+	L1M3	LINE/L1	4891	5051	(1089)	1444897
2348	8.5	0.7	0.3	chr16	25055840	25056145	(65282200)	+	AluSq2	SINE/Alu	1	307	(6)	1446125
1447	24.8	2.4	4.2	chr16	25855799	25856159	(64482186)	C	L1MCb	LINE/L1	(5397)	648	301	1447828
2233	21.7	8.1	4.4	chr16	25856160	25856546	(64481799)	+	MER21C	LTR/ERVL	9	503	(435)	1447840
26	28.6	1.1	1.1	chr16	25950432	25950519	(64387826)	+	(AATG)n	Simple_repeat	1	89	(0)	1448031
374	35.4	0.0	0.0	chr16	25950765	25950891	(64387454)	+	MIRb	SINE/MIR	120	246	(22)	1448032
16	18.9	2.4	0.0	chr16	28212035	28212076	(62126269)	+	G-rich	Low_complexity	1	43	(0)	1452865
190	16.5	22.9	2.1	chr16	28212245	28212337	(62126008)	C	L2a	LINE/L2	(3)	3423	3306	1452866
190	27.1	11.4	0.0	chr16	28212334	28212403	(62125942)	C	L2b	LINE/L2	(0)	3375	3297	1452867
289	26.6	1.2	0.0	chr16	30092840	30092918	(60245427)	C	MIRc	SINE/MIR	(77)	191	112	1457246
264	23.4	1.5	0.0	chr16	30445764	30445827	(59892518)	C	LTR83	LTR/ERVL	(151)	629	565	1458051
238	21.6	16.2	0.0	chr16	30445893	30445980	(59892365)	C	LTR83	LTR/ERVL	(398)	382	278	1458051
7223	10.4	0.4	2.4	chr16	31245350	31246442	(59091903)	C	MER11C	LTR/ERVK	(0)	1071	1	1459944
4607	10.1	1.7	0.3	chr16	50458067	50458689	(39879656)	+	MER41B	LTR/ERV1	3	634	(0)	1472528
3034	16.2	7.7	9.6	chr16	59201283	59202024	(31136321)	C	LTR8A	LTR/ERV1	(0)	727	1	1488499
653	28.2	6.9	0.5	chr16	59202036	59202238	(31136107)	C	MIR	SINE/MIR	(28)	234	18	1488500
4063	12.6	3.6	0.2	chr16	60217589	60218210	(30120135)	C	LTR9B	LTR/ERV1	(0)	644	1	1489958
398	32.9	4.4	7.9	chr16	65318787	65319181	(25019164)	C	L2c	LINE/L2	(70)	3317	2938	1497769
2853	14.5	3.6	8.4	chr16	65772329	65772721	(24565624)	+	MER34C_	LTR/ERV1	1	381	(204)	1498488
272	28.1	0.0	2.4	chr16	66752068	66752151	(23586194)	C	MIRc	SINE/MIR	(115)	153	72	1500338
736	24.7	5.3	0.7	chr16	66752168	66752399	(23585946)	+	MER110A	LTR/ERV1	265	484	(7)	1500339
305	24.8	8.4	2.7	chr16	69078117	69078228	(21260117)	C	L2a	LINE/L2	(342)	3077	2959	1505037
16	14.7	5.3	0.0	chr16	70439132	70439169	(19899176)	+	(CGC)n	Simple_repeat	1	40	(0)	1507981
17	28.0	1.7	0.0	chr16	70439170	70439180	(19899165)	+	(CCCGCC)n	Simple_repeat	28	61	(0)	1507980
593	4.1	0.0	0.0	chr16	71426493	71426565	(18911780)	+	tRNA-Met	tRNA	1	73	(3)	1509672
16	0.0	0.0	0.0	chr16	71467961	71467977	(18870368)	+	(G)n	Simple_repeat	1	17	(0)	1509741
2183	10.9	1.0	0.0	chr16	71468075	71468359	(18869986)	C	AluSq2	SINE/Alu	(25)	288	1	1509742
41	13.9	0.0	0.0	chr16	73483299	73483369	(16854976)	+	(GAGA)n	Simple_repeat	1	71	(0)	1513086
433	26.6	5.9	2.3	chr16	79055293	79055544	(11282801)	+	MLT1G	LTR/ERVL-MaLR	11	359	(232)	1522887
19	17.5	0.0	0.0	chr16	79601985	79602022	(10736323)	+	A-rich	Low_complexity	1	38	(0)	1523840
2535	7.4	0.0	0.3	chr16	81729850	81730161	(8608184)	C	AluSp	SINE/Alu	(2)	311	1	1527882
184	27.1	13.7	6.1	chr16	81730244	81730357	(8607988)	+	MamTip2	DNA/hAT-Tip100	182	305	(0)	1527883
4426	6.0	1.3	0.4	chr16	83768470	83769017	(6569328)	C	MER41A	LTR/ERV1	(0)	554	2	1531558
3301	12.0	9.3	3.5	chr16	83769018	83769370	(6568975)	C	LTR26D	LTR/ERV1	(88)	516	122	1531557
982	25.7	8.4	1.1	chr16	84300152	84300504	(6037841)	+	LTR16C	LTR/ERVL	77	457	(32)	1532548
441	26.5	3.8	0.5	chr16	85728702	85728872	(4609473)	C	MIRb	SINE/MIR	(22)	208	33	1535317
357	26.7	4.1	1.4	chr16	85728880	85729041	(4609304)	C	MER5A	DNA/hAT-Charlie	(0)	166	4	1535318
596	21.8	0.0	0.0	chr16	86107788	86108961	(4229384)	+	(TAC)n	Simple_repeat	1	1174	(0)	1536056
3242	17.2	3.6	8.7	chr16	87109407	87110133	(3228212)	C	LTR8	LTR/ERV1	(0)	691	3	1537815
4331	7.7	1.1	0.0	chr16	87110134	87110681	(3227664)	C	MER41A	LTR/ERV1	(0)	554	1	1537816
1793	17.4	0.0	0.7	chr16	87778561	87778854	(2559491)	C	AluJr	SINE/Alu	(16)	296	5	1539048
15	22.5	0.0	2.3	chr16	89720846	89720888	(617457)	+	(CGG)n	Simple_repeat	1	43	(0)	1541725
12	7.4	0.0	11.1	chr17	1399740	1399775	(81857666)	+	(CCTCCC)n	Simple_repeat	1	36	(0)	1547030
2459	6.0	0.7	0.7	chr17	4143245	4143544	(79113897)	+	AluSq	SINE/Alu	1	300	(13)	1552423
15	28.6	3.2	0.0	chr17	4143605	4143668	(79113773)	+	(GAGCGA)n	Simple_repeat	1	66	(0)	1552424
2192	7.8	2.5	0.3	chr17	4396448	4396753	(78860688)	+	AluSq	SINE/Alu	1	313	(0)	1552967
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
673	2.6	0.0	0.0	chr17	8119155	8119230	(75138211)	+	tRNA-Lys-AAA	tRNA	1	76	(0)	1560127
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
678	3.9	0.0	0.0	chr17	8226232	8226308	(75031133)	C	tRNA-Thr-ACY	tRNA	(0)	77	1	1560365
870	23.3	2.8	0.0	chr17	13575929	13576104	(69681337)	+	MER5A	DNA/hAT-Charlie	9	189	(0)	1569995
1583	26.2	10.2	3.8	chr17	13576132	13576655	(69680786)	C	MLT1F1	LTR/ERVL-MaLR	(8)	561	1	1569996
260	33.8	2.1	5.6	chr17	15180549	15180692	(68076749)	+	MIRb	SINE/MIR	8	146	(122)	1572654
1447	10.0	3.1	8.3	chr17	18087496	18087625	(65169816)	+	MER30	DNA/hAT-Charlie	104	228	(2)	1577924
5796	15.1	4.5	0.9	chr17	20201799	20202824	(63054617)	+	Tigger2b_Pri	DNA/TcMar-Tigger	3	1067	(1)	1582137
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
497	20.7	8.7	7.1	chr17	27958717	27958843	(55298598)	+	L1ME3	LINE/L1	5967	6107	(55)	1587775
2069	14.6	0.3	1.0	chr17	27958844	27959151	(55298290)	+	AluJr	SINE/Alu	1	306	(6)	1587776
1265	27.0	7.0	3.0	chr17	28008849	28009341	(55248100)	C	Tigger11a	DNA/TcMar-Tigger	(164)	571	58	1587893
2559	7.1	0.0	0.3	chr17	28727612	28727920	(54529521)	C	AluSx	SINE/Alu	(4)	308	1	1589205
13	25.4	3.0	4.4	chr17	28902918	28902983	(54354458)	+	(CCCCGCG)n	Simple_repeat	1	68	(0)	1589592
496	20.0	3.7	1.9	chr17	29032376	29032482	(54224959)	+	MIRc	SINE/MIR	124	232	(36)	1589805
669	26.9	4.3	1.6	chr17	30336112	30336414	(52921027)	+	L1MC5a	LINE/L1	2463	2742	(35)	1592382
284	23.4	7.2	0.0	chr17	30336417	30336480	(52920961)	C	L2a	LINE/L2	(8)	3418	3350	1592383
531	23.0	3.1	1.6	chr17	30336489	30336616	(52920825)	C	MER91B	DNA/hAT-Tip100	(13)	177	48	1592384
187	30.2	4.5	0.0	chr17	30336658	30336720	(52920721)	C	L2a	LINE/L2	(50)	3337	3272	1592383
646	0.0	0.0	0.0	chr17	31550074	31550145	(51707296)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1594799
374	25.0	14.7	0.0	chr17	31842227	31842342	(51415099)	+	MIRb	SINE/MIR	39	174	(94)	1595450
2579	6.4	0.0	0.0	chr17	32676815	32677109	(50580332)	C	AluY	SINE/Alu	(16)	295	1	1597229
295	31.8	10.0	3.5	chr17	34178389	34178603	(49078838)	C	MIR	SINE/MIR	(36)	232	2	1600014
27	14.8	2.9	4.3	chr17	36776902	36776969	(46480472)	+	GA-rich	Low_complexity	1	70	(0)	1604617
1042	8.0	0.0	2.9	chr17	36777073	36777209	(46480232)	C	AluSz	SINE/Alu	(179)	133	1	1604618
193	19.7	0.0	0.0	chr17	36777212	36777256	(46480185)	C	MIRc	SINE/MIR	(56)	152	108	1604619
2432	8.2	1.6	0.0	chr17	37454289	37454592	(45802849)	C	AluSg7	SINE/Alu	(0)	309	1	1605909
186	28.6	1.8	0.0	chr17	38609879	38609934	(44647507)	+	L2c	LINE/L2	3268	3324	(63)	1608168
400	24.5	2.1	0.0	chr17	38609992	38610085	(44647356)	C	MER5A	DNA/hAT-Charlie	(30)	159	64	1608169
641	2.7	0.0	0.0	chr17	39154490	39154562	(44102879)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609433
12	23.3	4.4	0.0	chr17	39980700	39980744	(43276697)	+	(TCCTCCA)n	Simple_repeat	1	47	(0)	1611118
2280	8.7	1.6	0.0	chr17	41663068	41663365	(41594076)	C	AluSx	SINE/Alu	(9)	303	1	1613982
2039	8.1	0.7	0.0	chr17	42561315	42561586	(40695855)	C	AluSp	SINE/Alu	(35)	278	5	1615898
197	16.9	7.1	2.6	chr17	42561692	42561760	(40695681)	+	MIR1_Amn	SINE/MIR	121	195	(73)	1615899
198	30.4	7.5	4.3	chr17	42561819	42561959	(40695482)	+	MIRc	SINE/MIR	30	175	(93)	1615900
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
238	28.2	6.8	2.6	chr17	45364977	45365089	(37892352)	C	L2c	LINE/L2	(9)	3366	3249	1621900
2398	9.4	1.6	0.0	chr17	45365200	45365506	(37891935)	+	AluSz	SINE/Alu	1	312	(0)	1621901
2155	10.9	2.0	0.3	chr17	46179787	46180079	(37077362)	+	AluSq	SINE/Alu	1	298	(15)	1623517
2264	12.1	0.0	0.6	chr17	46180214	46180528	(37076913)	+	AluSq2	SINE/Alu	1	313	(0)	1623518
2107	8.5	0.0	1.1	chr17	48884961	48885231	(34372210)	+	AluSz	SINE/Alu	34	301	(11)	1628729
2316	7.5	0.0	0.0	chr17	49569710	49570014	(33687427)	C	AluSx	SINE/Alu	(7)	305	1	1630179
18	24.8	0.0	1.9	chr17	49678139	49678192	(33579249)	+	(CCCCT)n	Simple_repeat	1	54	(0)	1630373
372	34.9	3.1	1.0	chr17	50023259	50023852	(33233589)	+	(TGCA)n	Simple_repeat	1	606	(0)	1631009
28	5.9	0.0	0.0	chr17	50023853	50023888	(33233553)	+	(TATATGTG)n	Simple_repeat	1	36	(0)	1631010
232	47.0	0.9	2.5	chr17	50023889	50025023	(33232418)	+	(ATAC)n	Simple_repeat	4	1225	(0)	1631011
1338	25.1	7.4	3.5	chr17	51372515	51372940	(31884501)	C	MLT1J1	LTR/ERVL-MaLR	(0)	444	1	1633649
9179	17.3	3.5	1.6	chr17	51598362	51599967	(31657474)	+	MSTA-int	LTR/ERVL-MaLR	1	1639	(12)	1634070
3386	15.7	3.1	1.5	chr17	53607381	53607981	(29649460)	+	LTR36	LTR/ERV1	1	611	(0)	1636969
1297	25.1	15.5	4.4	chr17	54626025	54626641	(28630800)	C	LTR41C	LTR/ERVL	(3)	698	1	1638331
503	29.1	3.3	1.1	chr17	57892848	57893024	(25364417)	C	MER117	DNA/hAT-Charlie	(10)	187	7	1644055
341	29.9	11.8	0.6	chr17	58338649	58338806	(24918635)	+	MIRc	SINE/MIR	90	267	(1)	1644835
2383	4.6	0.4	0.7	chr17	59209539	59209839	(24047602)	C	AluSq2	SINE/Alu	(0)	313	9	1646700
18	14.9	0.0	0.0	chr17	59209850	59209880	(24047561)	+	(T)n	Simple_repeat	1	31	(0)	1646701
208	18.8	4.1	0.0	chr17	59565188	59565236	(23692205)	+	MIRc	SINE/MIR	61	108	(100)	1647535
335	32.5	5.6	6.6	chr17	59619923	59620103	(23637338)	+	L1MDb	LINE/L1	582	760	(5649)	1647644
17	3.8	3.7	0.0	chr17	59838959	59838985	(23418456)	+	(GTTTT)n	Simple_repeat	1	28	(0)	1648065
2226	8.9	1.6	1.6	chr17	59838988	59839290	(23418151)	C	AluSq2	SINE/Alu	(10)	303	1	1648066
271	30.6	6.2	2.1	chr17	61245970	61246083	(22011358)	C	MIR3	SINE/MIR	(135)	133	9	1650740
13	21.5	0.0	4.8	chr17	63842651	63842692	(19414749)	+	(CCCGC)n	Simple_repeat	1	42	(0)	1655439
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
14	15.7	0.0	5.1	chr17	63842976	63843014	(19414427)	+	(CCCAG)n	Simple_repeat	1	39	(0)	1655441
2672	18.2	3.5	1.8	chr17	66730256	66730807	(16526634)	C	MER41B	LTR/ERV1	(38)	596	75	1660716
2317	6.9	2.9	2.3	chr17	66731069	66731373	(16526068)	+	AluSq	SINE/Alu	1	307	(6)	1660717
487	11.8	0.0	0.0	chr17	68019900	68019967	(15237474)	C	tRNA-Arg-AGG	tRNA	(6)	70	3	1663342
46	18.2	7.5	1.9	chr17	72150962	72151009	(11106432)	+	GA-rich	Low_complexity	1	152	(0)	1669883
33	21.6	1.1	3.2	chr17	72151010	72151102	(11106339)	+	G-rich	Low_complexity	1	94	(0)	1669884
8316	16.8	1.4	1.2	chr17	73685795	73687191	(9570250)	+	MSTA-int	LTR/ERVL-MaLR	181	1580	(0)	1672783
281	34.2	4.1	0.8	chr17	75753023	75753140	(7504301)	+	MIR	SINE/MIR	37	158	(104)	1676707
195	27.1	0.5	2.0	chr17	77790612	77790711	(5466730)	C	L2c	LINE/L2	(272)	3115	3019	1680641
422	14.2	2.4	7.4	chr17	78134577	78134700	(5122741)	C	MIRb	SINE/MIR	(64)	204	82	1681248
2246	11.1	0.0	0.0	chr17	78213748	78214044	(5043397)	C	AluSq2	SINE/Alu	(16)	297	1	1681420
1927	10.0	1.5	0.4	chr17	80261737	80261996	(2995445)	+	AluSx	SINE/Alu	1	263	(49)	1684775
336	20.5	6.3	4.1	chr18	3333337	3333493	(77039792)	+	MER34A1	LTR/ERV1	395	546	(49)	1694176
441	30.7	6.2	1.9	chr18	3585441	3585656	(76787629)	+	Tigger19b	DNA/TcMar-Tigger	323	548	(2)	1694697
762	19.3	0.0	1.5	chr18	3585662	3585796	(76787489)	+	FLAM_C	SINE/Alu	1	133	(10)	1694698
1914	17.6	0.0	0.7	chr18	4119092	4119393	(76253892)	C	AluJo	SINE/Alu	(12)	300	1	1695574
9574	19.9	6.5	4.2	chr18	4492900	4494743	(75878542)	C	L1MC3	LINE/L1	(437)	7348	5443	1696063
1968	11.8	7.2	0.0	chr18	4494744	4495014	(75878271)	C	AluSz	SINE/Alu	(20)	292	1	1696065
9574	19.9	6.5	4.2	chr18	4495015	4495080	(75878205)	C	L1MC3	LINE/L1	(2343)	5442	5377	1696063
799	22.6	4.1	2.8	chr18	4854652	4854869	(75518416)	C	LTR50	LTR/ERVL	(573)	222	2	1696505
2723	19.5	11.9	4.3	chr18	5104039	5104762	(75268523)	+	LTR48	LTR/ERV1	1	787	(0)	1696811
23	15.5	6.0	0.0	chr18	5296223	5296272	(75077013)	+	(GC)n	Simple_repeat	1	53	(0)	1697045
448	24.6	0.6	0.4	chr18	13822909	13823988	(66549297)	+	(CAAC)n	Simple_repeat	1	1086	(0)	1709568
21	20.4	1.9	0.0	chr18	21444563	21444614	(58928671)	+	(TTTCC)n	Simple_repeat	1	53	(0)	1712599
2206	11.8	0.0	1.3	chr18	24233640	24233945	(56139340)	C	AluSz	SINE/Alu	(3)	309	8	1717565
206	37.1	7.9	0.8	chr18	24233980	24234096	(56139189)	C	L2c	LINE/L2	(159)	3228	3103	1717564
320	12.1	4.3	2.9	chr18	24378572	24378639	(55994646)	+	L1ME4b	LINE/L1	455	523	(369)	1717832
2202	23.4	17.6	2.9	chr18	24378735	24379237	(55994048)	+	HAL1	LINE/L1	579	1197	(1310)	1717833
13	9.3	0.0	0.0	chr18	24426263	24426285	(55947000)	+	(AAAC)n	Simple_repeat	1	23	(0)	1717928
11979	5.8	0.2	0.0	chr18	26232227	26233679	(54139606)	C	HERV9-int	LTR/ERV1	(2)	8434	6979	1720587
3452	16.4	3.1	4.0	chr18	27227421	27228143	(53145142)	C	LTR8A	LTR/ERV1	(2)	725	10	1722124
1047	19.0	1.1	2.1	chr18	27649635	27649827	(52723458)	+	MLT2B1	LTR/ERVL	1	191	(324)	1722694
1370	21.4	0.9	8.8	chr18	27649927	27650280	(52723005)	+	MLT2B1	LTR/ERVL	195	520	(0)	1722694
1669	26.6	15.3	1.1	chr18	28961710	28962363	(51410922)	+	LTR41	LTR/ERVL	1	764	(4)	1724410
3866	24.3	8.1	4.3	chr18	31225078	31226275	(49147010)	C	L1M4a1	LINE/L1	(1332)	1247	1	1727398
382	34.3	11.7	2.3	chr18	31301517	31301848	(49071437)	+	L2c	LINE/L2	2998	3367	(20)	1727503
1980	12.5	0.0	1.0	chr18	31956781	31957069	(48416216)	C	AluSx	SINE/Alu	(18)	294	9	1728515
932	13.6	8.3	15.0	chr18	31957070	31957085	(48416200)	C	LTR26D	LTR/ERV1	(344)	278	278	1728514
1744	10.0	11.3	0.4	chr18	31957086	31957344	(48415941)	C	AluSq2	SINE/Alu	(21)	292	2	1728516
3291	22.6	4.4	0.1	chr18	32669433	32670193	(47703092)	C	L1M2b	LINE/L1	(5225)	1984	1190	1729719
2694	14.6	3.5	0.0	chr18	35827430	35827859	(44545426)	+	MER34C_	LTR/ERV1	1	447	(138)	1733874
760	28.4	4.8	7.5	chr18	36583613	36583805	(43789480)	C	L1MCc	LINE/L1	(5955)	468	271	1734966
3685	11.1	4.0	0.8	chr18	39685269	39685845	(40687440)	+	MER51C	LTR/ERV1	1	640	(0)	1739049
3320	5.2	0.2	10.4	chr18	42743802	42744300	(37628985)	+	LTR7	LTR/ERV1	1	448	(2)	1743232
2343	8.9	0.0	0.0	chr18	46027879	46028170	(34345115)	+	AluSz	SINE/Alu	1	292	(20)	1747843
1977	23.5	8.1	10.9	chr18	46166122	46166874	(34206411)	C	MER21C	LTR/ERVL	(84)	854	125	1748163
222	23.2	4.4	14.8	chr18	46658098	46658198	(33715087)	C	UCON132b	DNA/hAT-Tip100	(58)	90	1	1749024
2434	20.1	4.2	0.5	chr18	47967708	47968311	(32404974)	C	MER77	LTR/ERVL	(16)	684	41	1751084
250	26.1	9.3	0.0	chr18	49613075	49613162	(30760123)	C	MamTip2	DNA/hAT-Tip100	(41)	264	168	1753901
199	26.6	13.9	2.4	chr18	49613645	49613771	(30759514)	C	L3	LINE/CR1	(2861)	1238	1095	1753902
788	18.0	0.0	0.0	chr18	50785102	50785223	(29588062)	+	AluJb	SINE/Alu	164	285	(27)	1755729
11953	7.2	2.9	1.7	chr18	51110811	51112369	(29260916)	C	LTR12C	LTR/ERV1	(0)	1579	3	1756376
385	29.1	13.4	0.6	chr18	51168220	51168412	(29204873)	+	MIRb	SINE/MIR	13	248	(20)	1756469
807	15.4	9.3	3.1	chr18	51168460	51168491	(29204794)	+	MER20	DNA/hAT-Charlie	48	92	(127)	1756470
41	0.0	0.0	0.0	chr18	51168492	51168526	(29204759)	+	(TG)n	Simple_repeat	1	35	(0)	1756471
13	15.7	9.6	1.8	chr18	51417842	51417893	(28955392)	+	(TCCTTCTT)n	Simple_repeat	1	57	(0)	1756944
4183	10.0	3.8	0.3	chr18	51418004	51418646	(28954639)	+	LTR9C	LTR/ERV1	1	666	(0)	1756945
370	30.2	2.4	3.0	chr18	51654732	51654898	(28718387)	+	UCON5	Unknown	219	384	(52)	1757325
297	30.4	9.1	7.1	chr18	54119783	54120051	(26253234)	+	LTR88c	LTR/Gypsy?	41	315	(547)	1760743
737	12.3	11.1	1.8	chr18	54246828	54246941	(26126344)	+	AluSz6	SINE/Alu	1	126	(186)	1760959
22	0.0	0.0	0.0	chr18	54247035	54247058	(26126227)	+	(AC)n	Simple_repeat	1	24	(0)	1760960
22	3.8	0.0	0.0	chr18	54247058	54247084	(26126201)	+	(CT)n	Simple_repeat	1	27	(0)	1760961
5558	12.5	1.4	2.4	chr18	54528889	54529797	(25843488)	C	MER4D	LTR/ERV1	(3)	900	1	1761380
1199	12.6	0.0	1.6	chr18	57629852	57630033	(22743252)	+	AluJr	SINE/Alu	1	179	(133)	1765872
2055	23.6	4.1	3.7	chr18	58069704	58070244	(22303041)	+	L1MB7	LINE/L1	18	560	(6957)	1766745
1163	14.4	0.0	0.0	chr18	58849935	58850108	(21523177)	C	AluSc8	SINE/Alu	(9)	302	129	1768012
2227	11.0	0.7	0.3	chr18	58850113	58850412	(21522873)	C	AluSq2	SINE/Alu	(9)	304	4	1768013
2394	8.4	0.0	1.9	chr18	59863826	59864135	(20509150)	C	AluY	SINE/Alu	(7)	304	1	1769668
17	10.1	4.7	9.0	chr18	61893353	61893416	(18479869)	+	(CCGTCA)n	Simple_repeat	1	67	(0)	1772609
18	26.4	2.0	0.0	chr18	61893738	61893787	(18479498)	+	(GC)n	Simple_repeat	1	51	(0)	1772610
1983	12.5	3.0	0.3	chr18	62957711	62958005	(17415280)	C	AluSq2	SINE/Alu	(8)	305	3	1774334
1426	14.1	0.9	0.5	chr18	62958008	62958221	(17415064)	C	AluSx	SINE/Alu	(97)	215	1	1774333
1000	29.3	10.3	7.4	chr18	66271855	66272566	(14100719)	C	LTR68	LTR/ERV1	(0)	740	6	1778943
499	13.1	2.9	3.9	chr18	69878631	69878733	(10494552)	+	L1MA7	LINE/L1	5397	5498	(793)	1783797
4519	15.4	11.5	4.5	chr18	69878850	69879842	(10493443)	C	MER11C	LTR/ERVK	(0)	1071	1	1783798
381	31.8	12.2	2.0	chr18	72091543	72091792	(8281493)	+	LTR16E2	LTR/ERVL	278	556	(12)	1786767
3943	8.3	3.8	0.2	chr18	75936529	75937060	(4436225)	C	MER41A	LTR/ERV1	(0)	554	3	1791569
4825	23.7	7.7	6.0	chr18	79026071	79026976	(1346309)	+	L1MDa	LINE/L1	18	1085	(5548)	1795081
684	30.8	6.3	7.6	chr18	79181110	79182171	(1191114)	C	L1MEf	LINE/L1	(4706)	1709	606	1795280
410	33.3	8.9	2.4	chr18	79182288	79182496	(1190789)	C	L1MEf	LINE/L1	(5916)	484	261	1795280
2354	7.5	1.7	0.0	chr19	495852	496146	(58121470)	+	AluSp	SINE/Alu	1	300	(13)	1797026
962	0.9	0.0	0.9	chr19	893484	893585	(57724031)	+	U6	snRNA	1	102	(5)	1797832
2278	12.0	0.3	0.0	chr19	893586	893894	(57723722)	C	AluSg	SINE/Alu	(0)	310	1	1797833
350	27.7	4.7	0.0	chr19	1406997	1407097	(57210519)	+	MIR	SINE/MIR	43	148	(114)	1798746
22	10.7	8.0	0.0	chr19	1407283	1407349	(57210267)	+	(CGCA)n	Simple_repeat	1	72	(0)	1798747
201	17.5	0.0	7.0	chr19	1438094	1438136	(57179480)	+	L2c	LINE/L2	3338	3377	(10)	1798778
189	32.6	2.2	0.0	chr19	1438118	1438212	(57179404)	C	MIR3	SINE/MIR	(80)	182	83	1798779
957	6.9	0.0	0.0	chr19	2163376	2163491	(56454125)	C	AluSp	SINE/Alu	(197)	116	1	1800271
21	19.8	0.0	0.0	chr19	2163757	2163802	(56453814)	+	(CGTG)n	Simple_repeat	1	46	(0)	1800272
17	27.5	1.3	4.0	chr19	2163789	2163863	(56453753)	+	G-rich	Low_complexity	1	76	(0)	1800273
258	30.7	11.1	3.4	chr19	2463141	2463406	(56154210)	C	L1M3e	LINE/L1	(5636)	1394	1106	1800847
732	18.6	1.8	1.8	chr19	2740424	2740587	(55877029)	+	L1MA8	LINE/L1	6029	6192	(99)	1801562
605	5.5	0.0	0.0	chr19	4724635	4724707	(53892909)	C	tRNA-Val-GTG	tRNA	(3)	73	1	1806266
12	22.1	0.0	0.0	chr19	4724859	4724890	(53892726)	+	A-rich	Low_complexity	1	32	(0)	1806267
2308	5.8	1.4	0.0	chr19	5689664	5689940	(52927676)	C	AluY	SINE/Alu	(30)	281	1	1808597
288	31.2	9.4	0.0	chr19	5689973	5690068	(52927548)	C	MIR	SINE/MIR	(108)	154	49	1808598
2090	10.1	1.1	0.0	chr19	6280458	6280735	(52336881)	C	AluSz6	SINE/Alu	(6)	306	26	1809798
1352	18.6	4.3	0.1	chr19	7562695	7562974	(51054642)	C	L1MC2	LINE/L1	(514)	5830	5540	1813209
205	39.7	2.3	0.8	chr19	7563149	7563275	(51054341)	+	L2c	LINE/L2	2911	3039	(348)	1813212
4815	4.1	0.0	0.0	chr19	8203022	8203579	(50414037)	C	LTR6B	LTR/ERV1	(0)	558	1	1814689
390	23.4	2.7	6.1	chr19	8203584	8203644	(50413972)	+	MER81	DNA/hAT-Blackjack	1	62	(52)	1814690
324	32.7	1.7	8.8	chr19	8552616	8552785	(50064831)	C	MIRb	SINE/MIR	(91)	177	12	1815563
286	28.1	3.5	7.3	chr19	8552851	8553000	(50064616)	C	LTR91	LTR/ERVL	(15)	184	41	1815564
19	8.1	0.0	0.0	chr19	8553059	8553084	(50064532)	+	(GT)n	Simple_repeat	1	26	(0)	1815565
347	26.5	1.0	3.1	chr19	10028025	10028144	(48589472)	+	MIR	SINE/MIR	45	168	(100)	1818727
12	22.4	7.7	0.0	chr19	10416972	10417023	(48200593)	+	(GGCGAGG)n	Simple_repeat	1	56	(0)	1819689
1775	13.1	3.3	0.8	chr19	11382663	11382785	(47234831)	C	AluJo	SINE/Alu	(176)	136	9	1822182
15	9.9	5.6	5.3	chr19	12983690	12983725	(45633891)	+	(GC)n	Simple_repeat	1	38	(0)	1825706
284	14.3	0.0	2.0	chr19	12983816	12983865	(45633751)	+	MIR1_Amn	SINE/MIR	109	157	(73)	1825707
232	3.5	0.0	0.0	chr19	13155390	13155418	(45462198)	+	MIRc	SINE/MIR	120	148	(120)	1825988
2426	6.4	0.0	0.0	chr19	16110946	16111240	(42506376)	C	AluSg7	SINE/Alu	(13)	296	2	1833147
5925	13.0	15.0	1.5	chr19	24075321	24076387	(34541229)	C	MER11B	LTR/ERVK	(0)	1236	1	1847564
16	22.7	1.6	4.8	chr19	28823635	28823696	(29793920)	+	(TCTTTC)n	Simple_repeat	1	63	(0)	1849270
412	38.1	3.4	6.3	chr19	28824156	28824550	(29793066)	+	L2b	LINE/L2	2469	2851	(568)	1849271
2204	19.8	1.9	9.6	chr19	28880916	28881480	(29736136)	+	MER41C	LTR/ERV1	1	521	(0)	1849374
496	27.9	9.7	0.0	chr19	29329842	29329981	(29287635)	C	MIRb	SINE/MIR	(27)	241	87	1850089
4207	8.2	1.4	0.2	chr19	32308353	32308898	(26308718)	C	MER41A	LTR/ERV1	(0)	554	2	1854567
196	32.4	6.6	0.0	chr19	33023037	33023107	(25594509)	+	MIRc	SINE/MIR	122	197	(71)	1855977
411	23.5	0.0	8.5	chr19	33373111	33373240	(25244376)	+	SVA_E	Retroposon/SVA	194	312	(1070)	1856705
767	12.5	0.0	0.9	chr19	33373142	33373253	(25244363)	C	AluJo	SINE/Alu	(196)	116	6	1856706
4364	6.8	0.9	0.0	chr19	33566783	33567330	(25050286)	C	MER41A	LTR/ERV1	(1)	553	1	1856957
565	28.5	22.1	1.4	chr19	35066708	35067121	(23550495)	C	MLT1K	LTR/ERVL-MaLR	(72)	523	14	1859641
8463	16.9	3.1	2.7	chr19	35246309	35247478	(23370138)	+	L1MB4	LINE/L1	5491	6674	(4)	1860015
574	24.5	17.3	0.0	chr19	35247509	35247821	(23369795)	C	L2a	LINE/L2	(241)	3185	2797	1860019
21	19.9	2.2	0.0	chr19	37906671	37906716	(20710900)	+	(CG)n	Simple_repeat	1	47	(0)	1865341
554	1.3	0.0	20.2	chr19	39412167	39412260	(19205356)	C	tRNA-Ile-ATA	tRNA	(2)	75	1	1869015
9279	11.5	10.0	0.0	chr19	40980125	40981546	(17636070)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1872360
647	30.0	10.5	5.1	chr19	42140487	42140837	(16476779)	+	L2b	LINE/L2	3004	3375	(0)	1874665
22	12.0	4.4	0.0	chr19	42313328	42313372	(16304244)	+	(GCCGGA)n	Simple_repeat	1	47	(0)	1875003
19	11.5	2.5	2.4	chr19	42313400	42313439	(16304177)	+	(GCT)n	Simple_repeat	1	41	(0)	1875004
362	28.8	6.0	2.5	chr19	43950771	43950930	(14666686)	+	L2	LINE/L2	632	797	(2622)	1877971
193	27.3	0.0	0.0	chr19	45405400	45405443	(13212173)	+	MIR3	SINE/MIR	111	154	(54)	1881219
791	23.4	1.1	1.7	chr19	46513402	46513579	(12104037)	C	MER5B	DNA/hAT-Charlie	(0)	178	2	1883881
274	12.2	2.6	0.5	chr19	46513866	46513924	(12103692)	+	MIRc	SINE/MIR	109	168	(62)	1883882
571	18.2	7.2	4.1	chr19	46851218	46851338	(11766278)	C	AluJr4	SINE/Alu	(179)	133	9	1884739
26	0.0	0.0	0.0	chr19	47226328	47226352	(11391264)	+	(CCCTGG)n	Simple_repeat	1	25	(0)	1885597
1365	24.2	8.4	1.8	chr19	47707125	47707590	(10910026)	C	L2a	LINE/L2	(241)	3185	2678	1886819
14	8.1	3.9	0.0	chr19	47707623	47707648	(10909968)	+	(TTTG)n	Simple_repeat	1	27	(0)	1886830
1765	18.9	0.0	2.0	chr19	47707666	47707966	(10909650)	+	AluSx	SINE/Alu	1	295	(17)	1886831
1645	18.3	0.3	3.0	chr19	47744950	47745250	(10872366)	+	AluJo	SINE/Alu	1	293	(19)	1886957
1799	13.1	9.9	0.0	chr19	47950510	47950783	(10666833)	C	AluSx1	SINE/Alu	(8)	304	1	1887525
963	12.6	0.0	0.0	chr19	48103046	48103172	(10514444)	C	AluJo	SINE/Alu	(185)	127	1	1887947
1415	26.7	11.0	2.6	chr19	48588604	48589545	(10028071)	C	L2a	LINE/L2	(133)	3293	2253	1889155
819	11.0	0.0	0.0	chr19	48882278	48882395	(9735221)	+	MER41B	LTR/ERV1	13	130	(504)	1889855
4069	6.2	0.0	0.0	chr19	48882411	48882938	(9734678)	C	LTR10C	LTR/ERV1	(0)	591	64	1889856
1886	10.2	5.0	0.4	chr19	49986907	49987172	(8630444)	C	AluSg4	SINE/Alu	(31)	279	1	1892352
219	37.6	6.5	2.5	chr19	49987173	49987241	(8630375)	+	L2	LINE/L2	2428	2502	(917)	1892351
1495	27.8	1.2	1.9	chr19	51905172	51905603	(6712013)	C	MER57F	LTR/ERV1	(6)	429	1	1896458
1828	13.0	4.2	8.2	chr19	54036196	54036247	(4581369)	C	THE1B	LTR/ERVL-MaLR	(0)	364	313	1900896
428	23.3	11.7	0.0	chr19	55461195	55461323	(3156293)	+	MIRc	SINE/MIR	41	186	(82)	1903779
12	19.3	0.0	5.1	chr19	55600208	55600246	(3017370)	+	(GCGG)n	Simple_repeat	1	39	(0)	1904120
19	11.3	2.5	2.4	chr19	55600272	55600311	(3017305)	+	(GCC)n	Simple_repeat	1	41	(0)	1904121
2430	7.3	0.7	1.6	chr19	55631878	55632191	(2985425)	+	AluSp	SINE/Alu	2	312	(1)	1904195
462	26.9	10.4	3.2	chr19	56252868	56253117	(2364499)	C	LTR41B	LTR/ERVL	(488)	270	1	1905468
854	28.7	4.3	3.9	chr2	481744	482226	(241711303)	C	HAL1	LINE/L1	(954)	1553	1069	1911291
3099	17.0	9.3	2.7	chr2	2007724	2008400	(240185129)	+	LTR8A	LTR/ERV1	1	727	(0)	1912751
250	11.1	2.2	0.0	chr2	2613547	2613591	(239579938)	C	L1M6	LINE/L1	(5901)	595	550	1913479
3077	23.7	5.8	7.9	chr2	4995261	4996165	(237197364)	+	L1MC3	LINE/L1	3	902	(5143)	1916486
186	30.6	15.9	4.4	chr2	5916365	5916590	(236276939)	C	L2c	LINE/L2	(1220)	2199	1943	1917781
32544	20.9	1.9	1.6	chr2	6838364	6846789	(235346740)	C	HUERS-P3-int	LTR/ERV1	(224)	8695	262	1919104
247	25.2	12.3	1.8	chr2	7672088	7672196	(234521333)	+	L3	LINE/CR1	3928	4049	(50)	1920225
3587	5.1	0.0	0.7	chr2	7872706	7873156	(234320373)	C	LTR7	LTR/ERV1	(2)	448	1	1920561
1309	24.3	6.0	0.3	chr2	7891272	7891601	(234301928)	+	L1M4	LINE/L1	2	351	(7166)	1920584
359	13.3	13.5	2.2	chr2	7891601	7891692	(234301837)	+	L1M4	LINE/L1	1774	1877	(5640)	1920584
326	32.2	3.2	6.2	chr2	7891750	7891941	(234301588)	C	L1M5	LINE/L1	(1679)	4467	4282	1920583
11	24.3	0.0	0.0	chr2	11482634	11482667	(230710862)	+	(CCGCCC)n	Simple_repeat	1	34	(0)	1926724
23	17.6	0.0	1.9	chr2	11482823	11482875	(230710654)	+	G-rich	Low_complexity	1	53	(0)	1926725
4775	9.9	1.3	0.2	chr2	12083869	12084495	(230109034)	+	MER41B	LTR/ERV1	1	634	(0)	1927744
2276	7.4	0.3	9.4	chr2	15119300	15119638	(227073891)	C	AluSc8	SINE/Alu	(3)	308	1	1932233
211	25.7	5.8	6.6	chr2	15119788	15119908	(227073621)	C	MIRb	SINE/MIR	(19)	249	130	1932234
1515	20.5	8.4	1.8	chr2	15259282	15259764	(226933765)	+	MER67B	LTR/ERV1	1	418	(243)	1932439
299	30.9	2.1	2.1	chr2	16722673	16722768	(225470761)	C	LTR16E1	LTR/ERVL	(222)	316	221	1934964
2034	15.1	0.3	0.0	chr2	17138518	17138828	(225054701)	+	AluSx	SINE/Alu	1	312	(0)	1935560
1947	12.6	6.6	2.5	chr2	19862963	19863327	(222330202)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1939394
17	9.5	5.9	0.0	chr2	19864057	19864091	(222329438)	+	(TTGT)n	Simple_repeat	1	37	(0)	1939395
2295	10.3	0.0	0.3	chr2	19864093	19864392	(222329137)	C	AluSx1	SINE/Alu	(9)	303	5	1939396
5336	12.1	13.0	9.7	chr2	20105982	20107080	(222086449)	C	LTR12D	LTR/ERV1	(113)	1141	1	1939766
2256	17.8	6.8	4.2	chr2	22694697	22695224	(219498305)	C	MER74A	LTR/ERVL	(15)	543	1	1943409
240	33.3	2.1	1.1	chr2	25260258	25260351	(216933178)	C	MER5A	DNA/hAT-Charlie	(2)	187	93	1947603
248	33.7	0.0	1.9	chr2	25260278	25260383	(216933146)	+	MER5A1	DNA/hAT-Charlie	34	137	(29)	1947604
2268	8.9	0.0	0.7	chr2	28821179	28821497	(213372032)	C	AluSx3	SINE/Alu	(0)	311	4	1954286
12	19.8	7.9	4.9	chr2	30231338	30231413	(211962116)	+	(CGCAGC)n	Simple_repeat	1	82	(0)	1956612
1989	19.1	6.7	1.8	chr2	34447122	34447573	(207745956)	+	MER67D	LTR/ERV1	11	486	(28)	1963588
183	24.0	8.6	9.4	chr2	37657191	37657296	(204536233)	+	L2c	LINE/L2	3052	3156	(231)	1968052
5324	21.5	6.1	3.0	chr2	38224541	38226830	(203966699)	+	L1MC2	LINE/L1	3	2809	(4319)	1968859
2453	5.6	0.0	3.4	chr2	38777652	38777971	(203415558)	C	AluSq2	SINE/Alu	(4)	309	1	1969947
2221	12.4	0.7	0.0	chr2	39364586	39364884	(202828645)	+	AluSx	SINE/Alu	1	301	(11)	1971068
3302	10.8	5.2	1.9	chr2	39364885	39365420	(202828109)	C	MER4D1	LTR/ERV1	(344)	556	2	1971067
41	8.2	0.0	0.0	chr2	41937460	41937512	(200256017)	+	(AC)n	Simple_repeat	1	53	(0)	1974671
12	4.7	0.0	7.7	chr2	44134879	44134904	(198058625)	+	(AAAC)n	Simple_repeat	1	26	(0)	1978658
1612	14.9	4.4	2.6	chr2	44134905	44135172	(198058357)	C	AluJr	SINE/Alu	(31)	281	9	1978659
2347	14.3	12.5	7.1	chr2	44135175	44135693	(198057836)	C	MER34C	LTR/ERV1	(0)	551	1	1978660
2050	23.8	6.7	6.3	chr2	44469742	44470369	(197723160)	C	L1M8	LINE/L1	(1226)	1129	475	1979266
448	23.2	0.0	3.9	chr2	44470370	44470472	(197723057)	C	HAL1M8	LINE/L1	(2601)	390	292	1979268
395	19.4	5.5	0.0	chr2	44470490	44470596	(197722933)	C	L1M8	LINE/L1	(2159)	196	83	1979266
13	23.9	2.3	0.0	chr2	44778844	44778887	(197414642)	+	(TCTCTCT)n	Simple_repeat	1	45	(0)	1979735
4595	9.4	0.8	0.5	chr2	46753518	46754147	(195439382)	C	MER41B	LTR/ERV1	(0)	634	3	1982754
1459	26.1	10.8	2.3	chr2	46754148	46754580	(195438949)	C	Tigger13a	DNA/TcMar-Tigger	(164)	607	131	1982753
923	18.9	10.0	3.6	chr2	47662380	47662631	(194530898)	+	MER34B-int	LTR/ERV1	599	868	(4068)	1984497
421	14.1	4.9	0.0	chr2	47662604	47662681	(194530848)	+	MER34B-int	LTR/ERV1	1035	1116	(4240)	1984497
261	22.9	9.8	0.0	chr2	47662682	47662764	(194530765)	+	MER67D	LTR/ERV1	120	211	(303)	1984498
934	26.7	3.8	1.6	chr2	47662799	47663103	(194530426)	+	MER34B-int	LTR/ERV1	1218	1529	(3827)	1984497
356	38.6	5.2	5.7	chr2	50225345	50225712	(191967817)	C	L2c	LINE/L2	(18)	3369	3004	1988481
509	14.9	17.1	0.0	chr2	54498284	54498390	(187695139)	+	MER3	DNA/hAT-Charlie	81	209	(0)	1994473
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
371	35.0	7.9	5.9	chr2	58497287	58497685	(183695844)	+	L2b	LINE/L2	2977	3375	(0)	1999873
213	29.3	10.0	1.7	chr2	58856476	58856639	(183336890)	+	MIRc	SINE/MIR	7	188	(42)	2000359
2069	12.9	0.0	1.4	chr2	64276127	64276420	(177917109)	C	AluSx	SINE/Alu	(22)	290	1	2009098
17	18.4	0.0	0.0	chr2	65580138	65580174	(176613355)	+	(CCTC)n	Simple_repeat	1	37	(0)	2011573
425	28.5	5.2	9.3	chr2	69713653	69713954	(172479575)	C	MamGypLTR1a	LTR/Gypsy	(444)	340	52	2017593
194	24.8	9.9	5.2	chr2	70123517	70123631	(172069898)	C	MIRc	SINE/MIR	(134)	134	14	2018440
2000	13.1	0.7	0.3	chr2	70123689	70123986	(172069543)	+	AluJo	SINE/Alu	2	300	(12)	2018441
2300	11.3	0.3	0.0	chr2	70249486	70249795	(171943734)	+	AluSx1	SINE/Alu	1	311	(1)	2018725
184	28.6	14.4	0.8	chr2	73737577	73737696	(168455833)	+	MIR3	SINE/MIR	30	168	(40)	2024107
2072	8.9	0.4	0.0	chr2	73737719	73737987	(168455542)	C	AluY	SINE/Alu	(16)	295	26	2024108
18728	9.4	2.3	2.1	chr2	75216087	75219066	(166974463)	C	HERVH-int	LTR/ERV1	(4718)	2995	12	2026642
3529	5.1	0.0	0.7	chr2	75219087	75219537	(166973992)	C	LTR7	LTR/ERV1	(2)	448	1	2026642
3134	27.3	5.3	2.1	chr2	78035624	78036846	(164156683)	+	L1MCb	LINE/L1	64	1415	(5336)	2030404
5231	8.4	3.3	0.4	chr2	83283000	83283743	(158909786)	+	MER4E	LTR/ERV1	1	766	(0)	2037467
2339	11.4	0.3	0.0	chr2	83283806	83284111	(158909418)	+	AluSp	SINE/Alu	1	307	(6)	2037468
819	15.3	0.0	0.0	chr2	85132453	85132576	(157060953)	C	FLAM_A	SINE/Alu	(16)	126	3	2040180
8117	19.1	3.4	0.5	chr2	101968938	101970524	(140223005)	C	MSTB-int	LTR/ERVL-MaLR	(14)	1637	3	2060430
18	22.4	2.4	0.0	chr2	103396124	103396183	(138797346)	+	(CT)n	Simple_repeat	1	61	(0)	2062262
283	35.7	5.1	0.0	chr2	106852491	106852602	(135340927)	+	L2b	LINE/L2	3258	3375	(0)	2067090
13	14.8	3.9	7.4	chr2	112646173	112646224	(129547305)	+	G-rich	Low_complexity	1	54	(0)	2075482
555	29.6	1.7	2.8	chr2	113390589	113390765	(128802764)	C	MIR3	SINE/MIR	(23)	185	11	2076724
5958	3.6	0.4	0.6	chr2	113603478	113604530	(128588999)	C	TAR1	Satellite/telo	(316)	1050	1	2077038
251	22.4	2.0	0.0	chr2	114710401	114710449	(127483080)	C	MIRb	SINE/MIR	(14)	254	205	2078802
2205	13.1	0.0	0.0	chr2	114710463	114710759	(127482770)	+	AluSz	SINE/Alu	1	297	(15)	2078803
3592	12.0	4.0	0.0	chr2	117087563	117088119	(125105410)	+	LTR19B	LTR/ERV1	1	580	(0)	2081864
260	32.7	4.0	12.1	chr2	122734544	122735043	(119458486)	C	L2a	LINE/L2	(1)	3425	2918	2090837
3221	13.4	4.2	2.0	chr2	122999460	123000000	(119193529)	+	LTR8	LTR/ERV1	1	553	(138)	2091203
872	16.7	0.0	0.7	chr2	123000001	123000139	(119193390)	+	LTR8	LTR/ERV1	554	691	(0)	2091204
975	10.6	14.5	5.5	chr2	123659079	123659299	(118534230)	C	LTR7	LTR/ERV1	(152)	298	1	2092058
1814	16.3	1.6	1.9	chr2	123659307	123659837	(118533692)	C	HERVH-int	LTR/ERV1	(3442)	4271	3806	2092059
223	31.8	5.4	6.4	chr2	127408662	127408943	(114784586)	+	L2c	LINE/L2	3068	3346	(29)	2097396
13130	14.2	2.6	3.4	chr2	127820039	127822528	(114371001)	+	HUERS-P3-int	LTR/ERV1	1099	3701	(5218)	2098055
288	24.0	4.6	7.4	chr2	128261020	128261154	(113932375)	+	LTR81AB	LTR/Gypsy	132	262	(16)	2098981
8140	18.0	2.4	4.5	chr2	128536973	128538468	(113655061)	+	LTR49-int	LTR/ERV1	1807	3272	(3059)	2099356
2804	12.3	9.1	0.0	chr2	128645278	128645706	(113547823)	+	MER4A1	LTR/ERV1	1	472	(0)	2099522
1302	18.9	0.0	0.0	chr2	130920098	130920324	(111273205)	C	AluJb	SINE/Alu	(1)	311	85	2102550
2005	12.3	0.7	0.0	chr2	131129511	131129787	(111063742)	C	AluSq2	SINE/Alu	(19)	294	16	2102890
256	24.0	3.9	1.3	chr2	136582751	136582826	(105610703)	+	LTR16E1	LTR/ERVL	4	81	(457)	2110937
250	31.6	3.1	0.0	chr2	136582913	136583007	(105610522)	+	LTR16E1	LTR/ERVL	156	253	(236)	2110937
1234	28.9	8.2	6.0	chr2	139045515	139046077	(103147452)	+	L1MCa	LINE/L1	1	576	(5469)	2114307
8094	21.1	6.4	5.1	chr2	139543652	139546407	(102647122)	+	MER65-int	LTR/ERV1	8	2466	(2405)	2114962
3886	16.2	8.7	1.6	chr2	140895360	140896105	(101297424)	C	LTR1E	LTR/ERV1	(0)	804	1	2116735
2012	18.2	6.0	5.1	chr2	144267971	144268398	(97925131)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	2121177
1798	20.4	1.4	2.5	chr2	144268399	144268672	(97924857)	+	MLT1A0	LTR/ERVL-MaLR	94	363	(2)	2121176
2708	6.8	10.9	0.2	chr2	146539893	146540292	(95653237)	+	LTR7	LTR/ERV1	1	448	(2)	2124042
332	32.6	4.3	1.5	chr2	146540946	146541079	(95652450)	+	MIRb	SINE/MIR	15	152	(116)	2124043
208	30.6	5.3	1.4	chr2	147175295	147175367	(95018162)	+	MIR3	SINE/MIR	130	205	(3)	2124880
2164	11.9	0.0	2.0	chr2	150868946	150869248	(91324281)	+	AluSx	SINE/Alu	1	297	(15)	2129977
1935	17.2	2.1	4.0	chr2	150869249	150869599	(91323930)	+	MER34B	LTR/ERV1	208	565	(0)	2129976
2324	6.9	3.9	6.6	chr2	151409228	151409547	(90783982)	C	AluSx	SINE/Alu	(1)	311	1	2130855
193	32.4	10.2	1.9	chr2	151409614	151409720	(90783809)	+	MIRc	SINE/MIR	22	138	(130)	2130856
2266	9.7	0.0	0.0	chr2	152452922	152453200	(89740329)	+	AluSg	SINE/Alu	1	279	(31)	2132457
305	33.5	6.1	1.5	chr2	154370928	154371194	(87822335)	C	L2-3_Crp	LINE/L2	(1099)	997	718	2134883
243	31.6	8.7	7.5	chr2	154371233	154371379	(87822150)	+	MER5B	DNA/hAT-Charlie	29	177	(1)	2134884
1211	21.4	15.1	1.6	chr2	157247137	157247564	(84945965)	+	LTR54B	LTR/ERV1	1	496	(2)	2138482
3266	23.2	8.4	4.5	chr2	157345448	157347164	(84846365)	+	L1MCb	LINE/L1	7	1888	(4863)	2138622
266	25.0	9.3	3.3	chr2	157932425	157932515	(84261014)	+	Arthur1	DNA/hAT-Tip100	3851	3947	(0)	2139469
546	15.6	0.0	0.0	chr2	160924909	160924996	(81268533)	C	MER5A	DNA/hAT-Charlie	(93)	96	9	2143716
313	23.9	7.4	0.0	chr2	160925011	160925098	(81268431)	+	MER5A1	DNA/hAT-Charlie	2	96	(70)	2143718
271	32.8	8.5	0.8	chr2	160925130	160925249	(81268280)	+	MER5A	DNA/hAT-Charlie	40	169	(20)	2143719
240	32.2	8.9	8.9	chr2	160925134	160925290	(81268239)	C	MER5A	DNA/hAT-Charlie	(32)	157	1	2143720
18	0.0	0.0	0.0	chr2	161281358	161281380	(80912149)	+	(TCTG)n	Simple_repeat	1	23	(0)	2144209
1936	10.9	5.3	0.3	chr2	162221258	162221541	(79971988)	+	AluSz	SINE/Alu	1	299	(13)	2145414
2100	28.7	3.2	2.9	chr2	164335019	164335743	(77857786)	C	L1MCa	LINE/L1	(5316)	729	3	2148161
11328	9.4	0.6	3.2	chr2	167267723	167269344	(74924185)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2151998
267	32.2	7.8	4.8	chr2	167274982	167275105	(74918424)	+	Tigger19a	DNA/TcMar-Tigger	191	318	(5)	2152007
10351	19.8	7.3	3.5	chr2	167330609	167332272	(74861257)	C	L1MA4A	LINE/L1	(4898)	1951	190	2152065
3509	18.5	2.9	1.6	chr2	167406277	167406953	(74786576)	+	L1MA4	LINE/L1	2	687	(4641)	2152163
223	34.0	2.1	2.1	chr2	167758263	167758358	(74435171)	+	L2c	LINE/L2	3247	3342	(45)	2152608
196	26.8	1.8	0.0	chr2	167861859	167861914	(74331615)	+	L2a	LINE/L2	3318	3374	(1)	2152716
3202	15.7	0.0	0.4	chr2	167862106	167862622	(74330907)	C	MLT2B1	LTR/ERVL	(5)	515	1	2152717
695	9.2	16.4	6.9	chr2	169789666	169789796	(72403733)	C	AluJr	SINE/Alu	(166)	146	1	2155604
620	16.1	11.8	0.0	chr2	169789813	169789961	(72403568)	+	L1ME3	LINE/L1	5320	5488	(674)	2155603
12	15.3	3.5	0.0	chr2	170214302	170214330	(71979199)	+	(CTTTT)n	Simple_repeat	1	30	(0)	2156292
2036	20.4	10.9	7.5	chr2	170324649	170325216	(71868313)	+	LTR41C	LTR/ERVL	23	619	(82)	2156449
648	27.2	6.8	2.4	chr2	171409444	171409695	(70783834)	C	MER76	LTR/ERVL	(35)	656	393	2158387
971	17.3	12.3	0.5	chr2	171409743	171409957	(70783572)	C	MER76	LTR/ERVL	(447)	244	1	2158387
15474	11.8	1.9	1.2	chr2	172674915	172677206	(69516323)	+	Tigger1	DNA/TcMar-Tigger	109	2417	(1)	2160515
624	17.2	11.4	1.8	chr2	173352692	173352825	(68840704)	C	L1ME3Cz	LINE/L1	(666)	331	178	2161537
4113	7.1	2.9	0.6	chr2	173352826	173353366	(68840163)	+	MER41A	LTR/ERV1	1	554	(0)	2161543
286	21.7	6.7	4.6	chr2	174487547	174487633	(67705896)	+	MIR	SINE/MIR	5	93	(169)	2163350
780	14.8	2.2	2.9	chr2	174697282	174697420	(67496109)	C	MER20	DNA/hAT-Charlie	(17)	202	65	2163704
196	28.6	6.7	3.9	chr2	174771891	174771992	(67421537)	+	L2	LINE/L2	65	169	(3250)	2163820
651	31.5	5.2	0.5	chr2	178522694	178522894	(63670635)	C	MIR	SINE/MIR	(0)	262	52	2169225
3201	21.5	8.3	3.5	chr2	186756608	186757411	(55436118)	C	MER21C	LTR/ERVL	(68)	870	25	2179541
4576	13.7	2.1	4.4	chr2	187461412	187462268	(54731261)	+	LTR1A2	LTR/ERV1	1	837	(0)	2180425
3289	7.4	0.0	0.7	chr2	187675819	187676269	(54517260)	C	LTR7	LTR/ERV1	(2)	448	1	2180662
2131	12.4	9.2	11.9	chr2	188032308	188032803	(54160726)	+	LTR21A	LTR/ERV1	1	481	(0)	2181144
3909	14.3	5.5	7.8	chr2	188032804	188033497	(54160032)	+	THE1C-int	LTR/ERVL-MaLR	83	759	(821)	2181143
2407	10.4	1.3	0.0	chr2	188217564	188217872	(53975657)	C	AluSq2	SINE/Alu	(0)	313	1	2181362
1464	20.2	8.2	16.6	chr2	188217873	188218306	(53975223)	+	LTR9C	LTR/ERV1	267	666	(0)	2181360
28	3.3	0.0	0.0	chr2	190534906	190534936	(51658593)	+	(CGGCCT)n	Simple_repeat	1	31	(0)	2184502
1741	18.3	0.9	2.0	chr2	195694832	195695176	(46498353)	C	MER61A	LTR/ERV1	(0)	341	1	2191349
3763	13.9	20.9	1.7	chr2	195695177	195695560	(46497969)	C	L1PB1	LINE/L1	(5857)	1006	625	2191348
14	11.6	0.0	3.3	chr2	196068164	196068193	(46125336)	+	(GTATA)n	Simple_repeat	1	30	(0)	2191847
13	19.8	0.0	2.7	chr2	196068194	196068200	(46125329)	+	(GTATG)n	Simple_repeat	1	37	(0)	2191848
302	35.9	2.0	6.2	chr2	196068201	196068411	(46125118)	C	MIRc	SINE/MIR	(63)	205	4	2191849
343	23.6	1.9	0.9	chr2	197075798	197075904	(45117625)	C	hAT-N1_Mam	DNA/hAT-Tip100?	(50)	290	183	2193346
2353	7.7	18.7	0.3	chr2	197578410	197578776	(44614753)	+	LTR7	LTR/ERV1	1	450	(0)	2194325
21410	15.8	1.9	2.9	chr2	197578777	197583625	(44609904)	+	HERVH-int	LTR/ERV1	1	5029	(2684)	2194325
19118	15.9	2.2	1.6	chr2	200054406	200061787	(42131742)	+	L1PA15	LINE/L1	605	8141	(19)	2197755
382	14.2	4.1	2.4	chr2	201232110	201232223	(40961306)	C	LTR41C	LTR/ERVL	(6)	752	609	2199793
825	20.3	12.5	5.8	chr2	201232239	201232551	(40960978)	C	LTR41C	LTR/ERVL	(364)	337	1	2199793
202	26.8	10.2	10.2	chr2	201995895	201996002	(40197527)	C	MER5A	DNA/hAT-Charlie	(67)	122	15	2200997
3136	12.3	2.4	0.2	chr2	202249915	202250369	(39943160)	C	LTR9B	LTR/ERV1	(179)	465	1	2201525
2342	10.4	0.0	0.3	chr2	202250398	202250704	(39942825)	+	AluSz	SINE/Alu	1	306	(6)	2201526
15	23.6	6.7	0.0	chr2	203396806	203396865	(38796664)	+	(CTCCTG)n	Simple_repeat	1	64	(0)	2203922
427	24.6	7.8	1.4	chr2	204282175	204282318	(37911211)	C	LTR33	LTR/ERVL	(315)	200	47	2205387
185	24.0	0.0	5.7	chr2	205748812	205748864	(36444665)	+	L2a	LINE/L2	3375	3424	(2)	2207365
359	27.0	4.5	10.9	chr2	205748982	205749288	(36444241)	+	MER102a	DNA/hAT-Charlie	67	331	(0)	2207366
1571	21.1	11.3	7.6	chr2	205957611	205958112	(36235417)	C	MER74A	LTR/ERVL	(21)	537	15	2207686
823	29.9	13.2	1.0	chr2	206462850	206463103	(35730426)	C	L2	LINE/L2	(559)	2860	2576	2208670
191	22.8	1.7	3.4	chr2	207772208	207772266	(34421263)	C	AmnSINE1	SINE/5S-Deu-L2	(215)	360	303	2210640
4667	8.7	0.3	2.9	chr2	207772280	207772811	(34420718)	+	MER41B	LTR/ERV1	1	523	(111)	2210641
61	9.4	4.8	0.0	chr2	208477884	208478008	(33715521)	+	(TACTAG)n	Simple_repeat	1	131	(0)	2211919
297	24.4	8.4	0.0	chr2	208478044	208478174	(33715355)	C	L1M6	LINE/L1	(4989)	1507	1365	2211920
2644	23.4	2.3	3.9	chr2	208594566	208595237	(33598292)	+	MER67B	LTR/ERV1	1	661	(0)	2212080
7866	17.5	1.2	0.3	chr2	210762400	210763733	(31429796)	C	MSTA-int	LTR/ERVL-MaLR	(305)	1346	1	2214739
1137	24.8	9.2	10.2	chr2	211331616	211332132	(30861397)	C	MER67D	LTR/ERV1	(3)	511	1	2215456
17	14.2	0.0	0.0	chr2	216372298	216372328	(25821201)	+	(CCG)n	Simple_repeat	1	31	(0)	2222623
18	16.9	2.3	4.4	chr2	219229338	219229381	(22964148)	+	(CG)n	Simple_repeat	1	45	(0)	2227554
2525	6.3	0.0	1.0	chr2	219687738	219688039	(22505490)	C	AluY	SINE/Alu	(11)	300	2	2228334
4241	11.5	0.8	5.0	chr2	219688040	219688165	(22505364)	C	MER41B	LTR/ERV1	(508)	126	3	2228333
542	21.7	4.3	7.4	chr2	219688240	219688288	(22505241)	+	MIR	SINE/MIR	5	53	(215)	2228335
2219	14.0	2.6	1.1	chr2	219688289	219688663	(22504866)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2228336
273	28.1	8.6	7.1	chr2	224433640	224433823	(17759706)	+	L2c	LINE/L2	2977	3163	(224)	2235924
285	29.4	3.4	1.2	chr2	224433901	224433986	(17759543)	+	L2c	LINE/L2	3300	3387	(0)	2235924
2360	12.7	2.2	2.7	chr2	226777530	226777895	(15415634)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2239444
3952	9.2	2.3	0.4	chr2	228507112	228507664	(13685865)	C	LTR6A	LTR/ERV1	(0)	564	1	2242174
427	25.9	12.5	0.9	chr2	230848294	230848588	(11344941)	+	L1ME4a	LINE/L1	4371	4711	(1435)	2245788
733	29.8	10.2	4.9	chr2	230849681	230850522	(11343007)	C	L2a	LINE/L2	(0)	3426	2472	2245791
574	31.9	17.4	5.4	chr2	230902114	230902908	(11290621)	C	MamGypLTR3a	LTR/Gypsy	(0)	981	72	2245886
709	27.6	16.6	3.0	chr2	231410149	231410511	(10783018)	C	MamGypLTR3a	LTR/Gypsy	(0)	981	560	2246804
1185	21.7	3.5	1.8	chr2	231410660	231410941	(10782588)	C	MamGypLTR3a	LTR/Gypsy	(648)	333	47	2246804
335	17.6	10.8	1.3	chr2	234881790	234881864	(7311665)	+	MLT1M	LTR/ERVL-MaLR	96	178	(494)	2252707
2628	18.4	2.6	3.0	chr2	234881913	234882443	(7311086)	C	MER45B	DNA/hAT-Tip100	(17)	1023	495	2252708
306	28.8	6.3	13.6	chr2	237642300	237642830	(4550699)	+	L1M3e	LINE/L1	1147	1636	(5394)	2256646
19	7.4	0.0	0.0	chr2	238240349	238240377	(3953152)	+	(CGTC)n	Simple_repeat	1	29	(0)	2257548
17	14.0	0.0	0.0	chr2	238240377	238240408	(3953121)	+	(CATT)n	Simple_repeat	1	32	(0)	2257549
12	20.4	5.6	3.5	chr2	241637639	241637692	(555837)	+	(GCGTC)n	Simple_repeat	1	57	(0)	2261473
3778	24.1	7.5	0.9	chr20	1427227	1428375	(63015792)	+	L1MD2	LINE/L1	28	1255	(5385)	2264989
1756	14.2	2.7	3.7	chr20	5749859	5750154	(58694013)	C	AluJr	SINE/Alu	(19)	293	1	2273202
594	5.7	2.2	0.0	chr20	9015417	9015504	(55428663)	C	L1PB1	LINE/L1	(1)	6150	6061	2278235
334	15.6	3.0	0.0	chr20	9016011	9016074	(55428093)	+	MLT1F1	LTR/ERVL-MaLR	70	135	(434)	2278236
402	33.5	9.4	3.1	chr20	9180326	9180772	(55263395)	+	MamGypsy2-I	LTR/Gypsy	393	870	(3296)	2278513
13	26.5	1.6	4.6	chr20	10219528	10219591	(54224576)	+	G-rich	Low_complexity	1	65	(0)	2280188
18	19.5	2.7	6.7	chr20	10219592	10219597	(54224570)	+	(GCGG)n	Simple_repeat	4	75	(0)	2280189
1576	23.3	5.7	10.1	chr20	10351045	10351578	(54092589)	C	MER21C	LTR/ERVL	(306)	632	124	2280392
1039	7.6	0.0	0.8	chr20	10351580	10351710	(54092457)	C	AluSq2	SINE/Alu	(15)	298	169	2280393
308	29.9	12.9	2.0	chr20	11271177	11271359	(53172808)	C	MIRb	SINE/MIR	(57)	211	1	2281746
12998	13.7	1.5	1.5	chr20	11379234	11383682	(53060485)	+	L1PA10	LINE/L1	1	4453	(2008)	2281911
3102	19.5	4.0	0.5	chr20	11411642	11412263	(53031904)	+	LTR9D	LTR/ERV1	1	645	(0)	2281967
693	31.9	4.7	1.4	chr20	11719300	11719585	(52724582)	+	L1MEj	LINE/L1	384	679	(1481)	2282383
14	28.0	0.0	0.0	chr20	12570695	12570735	(51873432)	+	(TAT)n	Simple_repeat	1	41	(0)	2283611
345	25.5	14.0	4.4	chr20	15976216	15976375	(48467792)	+	Tigger19a	DNA/TcMar-Tigger	146	323	(0)	2288703
2115	13.9	3.3	0.8	chr20	16940530	16940937	(47503230)	+	LTR49	LTR/ERV1	23	426	(129)	2290130
1110	21.6	5.8	4.7	chr20	16940931	16941270	(47502897)	+	LTR48B	LTR/ERV1	301	644	(0)	2290131
25	21.0	0.0	4.2	chr20	17682473	17682543	(46761624)	+	G-rich	Low_complexity	1	71	(0)	2291262
3624	14.1	6.7	0.5	chr20	19749528	19750105	(44694062)	+	MER41B	LTR/ERV1	17	632	(2)	2294573
2369	7.5	1.0	5.6	chr20	20016623	20016944	(44427223)	C	AluSz	SINE/Alu	(5)	307	1	2295062
24	25.2	2.7	1.3	chr20	31514352	31514424	(32929743)	+	(GC)n	Simple_repeat	1	75	(0)	2306155
250	12.5	0.0	0.0	chr20	31595611	31595650	(32848517)	+	MIR	SINE/MIR	80	119	(143)	2306362
675	27.6	12.7	2.8	chr20	31595638	31596028	(32848139)	C	L2a	LINE/L2	(31)	3395	2961	2306363
2144	9.9	0.7	0.7	chr20	31612396	31612698	(32831469)	C	AluSx3	SINE/Alu	(8)	303	1	2306410
1807	15.2	1.0	0.3	chr20	31612699	31612830	(32831337)	C	AluSq2	SINE/Alu	(181)	132	1	2306409
15	12.2	0.0	0.0	chr20	32031236	32031262	(32412905)	+	(CGA)n	Simple_repeat	1	27	(0)	2307467
21	26.9	2.1	4.1	chr20	33811326	33811395	(30632772)	+	(GCGGAG)n	Simple_repeat	1	69	(0)	2311672
2102	4.5	10.3	2.8	chr20	35412360	35412647	(29031520)	+	AluSz6	SINE/Alu	1	312	(0)	2315198
518	28.3	6.0	1.1	chr20	36886820	36887008	(27557159)	C	L2a	LINE/L2	(519)	2900	2702	2318696
199	21.3	6.0	0.0	chr20	37229195	37229241	(27214926)	C	MIRc	SINE/MIR	(5)	263	214	2319536
2414	5.0	0.0	0.4	chr20	37289116	37289392	(27154775)	C	AluSx1	SINE/Alu	(36)	276	1	2319672
570	31.3	9.1	11.5	chr20	38337562	38338197	(26105970)	C	MamGypLTR3a	LTR/Gypsy	(0)	981	363	2321946
433	28.6	5.3	3.0	chr20	38805292	38805457	(25638710)	+	MIRb	SINE/MIR	27	196	(72)	2322914
1580	25.5	17.3	5.1	chr20	38925727	38925938	(25518229)	C	L2b	LINE/L2	(2063)	1356	1146	2323161
278	26.9	4.9	0.0	chr20	41693485	41693562	(22750605)	C	LTR91	LTR/ERVL	(45)	154	73	2327924
272	33.6	10.2	7.3	chr20	47368953	47369324	(17074843)	+	L2c	LINE/L2	2526	2909	(510)	2339841
710	21.0	9.8	3.1	chr20	47369377	47369570	(17074597)	+	MIRb	SINE/MIR	27	242	(26)	2339842
256	27.7	13.3	4.4	chr20	47383888	47384023	(17060144)	C	MIRb	SINE/MIR	(68)	200	51	2339889
3964	10.8	7.9	0.7	chr20	47804195	47804791	(16639376)	+	LTR9B	LTR/ERV1	1	644	(0)	2340873
490	15.7	0.0	0.0	chr20	47804792	47804874	(16639293)	+	Alu	SINE/Alu	222	304	(7)	2340874
29	13.1	5.0	0.0	chr20	49483055	49483144	(14961023)	+	(CTTT)n	Simple_repeat	1	94	(0)	2344537
1406	23.9	1.5	1.5	chr20	52208755	52209035	(12235132)	+	L1ME1	LINE/L1	5795	6078	(101)	2351016
4755	9.4	1.1	0.2	chr20	52209036	52209673	(12234494)	C	LTR9B	LTR/ERV1	(0)	644	1	2351017
432	21.2	5.0	11.4	chr20	56736732	56736792	(7707375)	+	MIR	SINE/MIR	104	160	(102)	2359734
2374	9.3	0.7	0.0	chr20	56736793	56737102	(7707065)	+	AluSx	SINE/Alu	1	312	(0)	2359735
481	23.2	6.4	1.8	chr20	57231917	57232108	(7212059)	C	MIRb	SINE/MIR	(16)	252	34	2360810
540	24.3	7.7	1.4	chr20	57232113	57232258	(7211909)	+	MIR	SINE/MIR	31	186	(76)	2360811
2229	10.4	0.0	1.3	chr20	62301637	62301943	(2142224)	C	AluSz	SINE/Alu	(6)	306	4	2368406
1265	7.8	0.0	0.0	chr20	62847728	62847881	(1596286)	+	AluSx	SINE/Alu	1	154	(158)	2369007
218	31.8	10.4	2.3	chr20	62847904	62848080	(1596087)	C	L2	LINE/L2	(1454)	1965	1773	2369008
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
2345	14.5	5.6	2.2	chr21	15722394	15722810	(30987173)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2379530
623	30.1	5.2	3.3	chr21	15722819	15723062	(30986921)	+	MIRb	SINE/MIR	8	256	(12)	2379531
3223	13.1	0.6	2.1	chr21	15752928	15753451	(30956532)	C	LTR72	LTR/ERV1	(0)	519	4	2379585
2857	15.2	4.7	1.4	chr21	19120626	19121035	(27588948)	+	LTR72	LTR/ERV1	99	519	(0)	2383904
431	24.4	8.2	6.7	chr21	19121059	19121238	(27588745)	C	L1MCb	LINE/L1	(5855)	190	8	2383901
53	3.9	6.3	0.0	chr21	20997933	20998011	(25711972)	+	(ATCAGC)n	Simple_repeat	1	84	(0)	2386431
1660	16.8	2.8	7.0	chr21	25862141	25862512	(20847471)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	10	2393161
340	22.4	1.5	0.0	chr21	27370111	27370177	(19339806)	C	ERV3-16A3_I-int	LTR/ERVL	(4828)	168	101	2395316
639	28.8	9.9	3.9	chr21	27370267	27370523	(19339460)	C	LTR16	LTR/ERVL	(8)	430	157	2395321
2455	29.5	7.7	2.9	chr21	28325181	28326429	(18383554)	C	L1MDa	LINE/L1	(5214)	1419	21	2396600
4311	21.1	4.4	4.7	chr21	28516869	28517945	(18192038)	+	MER45R	DNA/hAT-Tip100	1	1073	(508)	2396860
574	30.5	4.8	0.8	chr21	30426747	30427071	(16282912)	+	LTR16B2	LTR/ERVL	1	362	(100)	2399767
2140	12.6	12.8	1.1	chr21	30427142	30427518	(16282465)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2399768
530	21.9	14.2	0.0	chr21	33684944	33685112	(13024871)	C	L1MC5	LINE/L1	(0)	9304	9108	2405448
370	30.9	8.7	0.0	chr21	33971596	33971721	(12738262)	+	MIRb	SINE/MIR	4	141	(127)	2405913
1957	20.5	5.8	2.7	chr21	33971722	33972208	(12737775)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	2405914
352	20.0	9.9	5.7	chr21	35521444	35521549	(11188434)	+	MER20	DNA/hAT-Charlie	75	185	(34)	2408227
1609	19.9	5.5	6.3	chr21	39030721	39031161	(7678822)	+	L1MB7	LINE/L1	5728	6164	(20)	2413883
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
1518	12.5	1.8	11.5	chr21	42956871	42957321	(3752662)	+	MER4A	LTR/ERV1	66	441	(153)	2419619
2052	13.7	0.3	0.0	chr21	42957322	42957614	(3752369)	+	AluSz	SINE/Alu	1	294	(18)	2419620
665	13.6	6.1	0.8	chr22	17171204	17171328	(33647140)	C	AluJo	SINE/Alu	(179)	133	2	2428366
908	10.8	1.5	0.0	chr22	17234881	17235010	(33583458)	+	AluSx3	SINE/Alu	1	132	(179)	2428520
2174	10.2	0.0	0.0	chr22	18001916	18002220	(32816248)	+	AluSz	SINE/Alu	1	305	(7)	2430020
774	24.9	6.9	1.9	chr22	23242738	23242999	(27575469)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	192	2437996
16	30.0	0.0	1.8	chr22	23786986	23787041	(27031427)	+	(GGC)n	Simple_repeat	1	56	(0)	2438970
15	18.7	0.0	10.4	chr22	23787102	23787168	(27031300)	+	(CCCCGC)n	Simple_repeat	1	67	(0)	2438971
14	22.3	0.0	4.3	chr22	23787357	23787402	(27031066)	+	G-rich	Low_complexity	1	46	(0)	2438972
57	3.6	0.0	0.0	chr22	24011077	24011134	(26807334)	+	(AC)n	Simple_repeat	1	58	(0)	2439358
26	18.8	2.0	0.0	chr22	24011135	24011185	(26807283)	+	(GC)n	Simple_repeat	1	52	(0)	2439359
439	26.8	10.6	0.6	chr22	26259813	26259981	(24558487)	C	MamRep564	Unknown	(107)	250	63	2443912
327	22.6	1.3	3.8	chr22	27825329	27825432	(22993036)	+	L2c	LINE/L2	2976	3079	(340)	2447596
2483	17.5	2.8	3.2	chr22	27825433	27825939	(22992529)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2447597
2154	9.8	0.0	4.6	chr22	28760877	28761181	(22057287)	C	AluSx3	SINE/Alu	(19)	292	2	2449133
5962	5.5	3.6	1.4	chr22	28761188	28761950	(22056518)	+	LTR17	LTR/ERV1	1	780	(0)	2449134
237	25.0	6.7	0.0	chr22	28772268	28772323	(22046145)	C	MIR	SINE/MIR	(3)	259	200	2449169
490	11.6	0.0	0.0	chr22	28772346	28772414	(22046054)	C	AluJo	SINE/Alu	(235)	77	9	2449170
390	24.0	1.5	4.4	chr22	28772424	28772573	(22045895)	C	MIR	SINE/MIR	(54)	208	74	2449169
2395	8.1	1.0	0.0	chr22	31159700	31160008	(19658460)	C	AluSz	SINE/Alu	(0)	312	1	2454141
1189	22.6	4.0	1.8	chr22	31160009	31160038	(19658430)	C	L1MC4	LINE/L1	(1198)	6844	6816	2454140
3092	14.2	10.5	2.2	chr22	31393872	31394412	(19424056)	+	LTR12	LTR/ERV1	4	594	(232)	2454693
9035	4.4	0.4	0.4	chr22	32146795	32147865	(18670603)	+	MER11C	LTR/ERVK	1	1071	(0)	2456449
2148	11.0	0.4	0.0	chr22	33822423	33822739	(16995729)	+	AluSx1	SINE/Alu	7	312	(0)	2459848
409	25.8	10.0	8.6	chr22	42649681	42650045	(8168423)	+	L2a	LINE/L2	2986	3411	(15)	2478572
392	30.9	5.7	0.7	chr22	44685008	44685157	(6133311)	+	MIRb	SINE/MIR	21	178	(90)	2482426
859	25.3	18.1	0.9	chr22	48072718	48073112	(2745356)	C	MLT2B4	LTR/ERVL	(63)	609	123	2487768
13	25.9	3.5	1.7	chr3	9553855	9553911	(188741648)	+	G-rich	Low_complexity	1	59	(0)	2507427
2098	10.3	0.3	8.5	chr3	10226637	10226965	(188068594)	+	AluSz	SINE/Alu	1	302	(10)	2508978
12	21.5	7.1	1.7	chr3	10248718	10248773	(188046786)	+	(CGGCGCC)n	Simple_repeat	1	60	(0)	2509045
13	20.8	0.0	0.0	chr3	13648801	13648833	(184646726)	+	(TGGCC)n	Simple_repeat	1	33	(0)	2515676
413	27.8	5.3	3.0	chr3	13648921	13649087	(184646472)	C	MIRb	SINE/MIR	(10)	258	88	2515677
7071	24.2	6.8	4.1	chr3	13728051	13728751	(184566808)	C	L1MDa	LINE/L1	(5632)	1001	34	2515805
4306	19.2	8.7	3.1	chr3	13728756	13730400	(184565159)	C	L1M4a2	LINE/L1	(2636)	3510	2110	2515809
1235	25.2	11.4	3.9	chr3	15148622	15149136	(183146423)	+	MLT1G3	LTR/ERVL-MaLR	3	561	(34)	2518280
182	24.6	9.0	1.6	chr3	16370220	16370281	(181925278)	C	MamRTE1	LINE/RTE-BovB	(1901)	1911	1845	2520384
743	23.3	4.9	12.0	chr3	16670254	16670628	(181624931)	+	MER77B	LTR/ERVL	1	347	(353)	2520880
1135	26.0	3.9	0.7	chr3	16686507	16686914	(181608645)	C	LTR16B2	LTR/ERVL	(0)	462	1	2520889
2881	13.6	6.2	4.1	chr3	16687132	16687697	(181607862)	+	MER34C_	LTR/ERV1	7	585	(0)	2520890
708	24.3	7.4	7.4	chr3	17094623	17094960	(181200599)	C	MLT1G3	LTR/ERVL-MaLR	(253)	342	5	2521397
12083	18.9	11.3	0.8	chr3	18294816	18296365	(179999194)	+	L1MA4A	LINE/L1	721	2550	(5016)	2523140
26253	3.0	0.1	0.0	chr3	18957807	18963833	(179331726)	C	L1PA2	LINE/L1	(2)	6153	124	2524052
7536	20.4	2.0	2.1	chr3	20287474	20288871	(178006688)	C	MSTB-int	LTR/ERVL-MaLR	(195)	1456	59	2525966
21588	11.5	2.2	1.3	chr3	21012260	21017860	(177277699)	C	L1PB1	LINE/L1	(361)	6506	862	2526879
392	22.6	3.1	2.1	chr3	24680766	24680860	(173614699)	+	MER5B	DNA/hAT-Charlie	1	96	(82)	2532240
364	30.9	0.8	0.0	chr3	25155730	25155852	(173139707)	C	UCON1	Unknown	(919)	467	344	2532945
45	32.0	2.2	1.1	chr3	25420690	25420868	(172874691)	+	(ATGG)n	Simple_repeat	1	183	(0)	2533293
235	25.0	7.7	1.0	chr3	25441634	25441730	(172853829)	C	L1ME2z	LINE/L1	(4)	6440	6337	2533318
9707	15.5	3.5	0.7	chr3	27228642	27232142	(171063417)	+	L1PB2	LINE/L1	942	4564	(2351)	2535773
224	30.8	8.6	7.0	chr3	27728288	27728458	(170567101)	C	L2b	LINE/L2	(17)	3358	3185	2536650
4170	11.4	3.5	0.3	chr3	27876859	27877472	(170418087)	C	MER41B	LTR/ERV1	(0)	634	1	2536920
558	30.6	10.1	7.0	chr3	27877473	27877563	(170417996)	C	LTR48B	LTR/ERV1	(483)	88	2	2536919
247	25.0	6.5	2.7	chr3	27877581	27877654	(170417905)	C	MLT1K	LTR/ERVL-MaLR	(326)	269	193	2536921
687	22.2	1.3	2.5	chr3	28081654	28081810	(170213749)	C	MER5B	DNA/hAT-Charlie	(18)	160	6	2537264
755	17.8	1.8	1.8	chr3	28081838	28082003	(170213556)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	2537265
2557	7.5	0.0	0.3	chr3	30084673	30084980	(168210579)	C	AluSp	SINE/Alu	(6)	307	1	2540037
1395	14.0	6.7	5.4	chr3	30084981	30085355	(168210204)	C	LTR36	LTR/ERV1	(168)	443	11	2540036
263	30.9	0.0	1.1	chr3	30549777	30549871	(167745688)	C	CR1-13_AMi	LINE/CR1	(20)	704	611	2540699
356	28.8	4.0	2.7	chr3	30695431	30695580	(167599979)	C	MIRb	SINE/MIR	(50)	218	67	2540931
14	15.9	0.0	0.0	chr3	33426304	33426331	(164869228)	+	(CAG)n	Simple_repeat	1	28	(0)	2545839
2684	16.5	7.2	3.8	chr3	33426423	33426964	(164868595)	C	L1MB7	LINE/L1	(9)	6175	5606	2545840
11644	14.0	0.8	2.2	chr3	35505159	35507285	(162788274)	+	L1PA10	LINE/L1	344	2464	(4019)	2548798
2336	9.4	0.0	3.4	chr3	37301776	37302095	(160993464)	C	AluSx	SINE/Alu	(3)	309	1	2551370
291	21.1	14.8	4.6	chr3	51538360	51538468	(146757091)	C	MIRb	SINE/MIR	(45)	223	102	2574562
48	2.1	0.0	0.0	chr3	54188229	54188276	(144107283)	+	(AAAC)n	Simple_repeat	1	48	(0)	2578705
644	36.3	8.1	2.3	chr3	54433525	54434184	(143861375)	+	L1MDb	LINE/L1	16	717	(5916)	2579065
496	26.4	7.0	3.9	chr3	54630486	54630666	(143664893)	C	MER103C	DNA/hAT-Charlie	(102)	195	9	2579322
2546	18.6	3.8	3.9	chr3	56115663	56116221	(142179338)	+	MER74A	LTR/ERVL	1	558	(0)	2581527
1906	17.7	0.8	4.6	chr3	56123149	56123521	(142172038)	+	MLT1A0	LTR/ERVL-MaLR	1	359	(6)	2581541
577	28.2	6.8	3.3	chr3	56123523	56123764	(142171795)	+	L2	LINE/L2	2619	2869	(550)	2581542
305	31.3	11.6	5.1	chr3	58021654	58021766	(140273793)	+	L2b	LINE/L2	3078	3201	(174)	2585209
1960	15.4	1.3	0.7	chr3	58021767	58022072	(140273487)	C	AluJo	SINE/Alu	(4)	308	1	2585210
3253	17.4	7.0	1.6	chr3	60772469	60773147	(137522412)	+	LTR8A	LTR/ERV1	10	727	(0)	2589492
705	33.6	13.5	6.1	chr3	62679060	62679956	(135615603)	+	LTR78B	LTR/ERV1	322	1294	(2)	2592667
739	18.1	3.0	1.2	chr3	65952919	65953080	(132342479)	C	MIR	SINE/MIR	(21)	241	77	2598350
2666	20.6	0.6	1.5	chr3	66532059	66532595	(131762964)	+	MER74A	LTR/ERVL	1	532	(26)	2599352
497	29.7	5.7	6.8	chr3	66573384	66573719	(131721840)	+	MamGypLTR3a	LTR/Gypsy	558	889	(92)	2599450
4673	14.6	2.0	4.6	chr3	66858319	66858946	(131436613)	+	LTR1A1	LTR/ERV1	192	799	(0)	2600001
377	22.7	7.7	3.6	chr3	66858947	66858975	(131436584)	C	MER5A1	DNA/hAT-Charlie	(115)	51	23	2600000
837	26.0	12.8	6.9	chr3	66858991	66859408	(131436151)	+	LTR16A1	LTR/ERVL	11	456	(0)	2600003
12	30.5	1.6	3.1	chr3	67515938	67516001	(130779558)	+	(CTCC)n	Simple_repeat	1	65	(0)	2600942
2447	13.2	4.4	4.4	chr3	69999501	70000000	(128295559)	+	LTR1A2	LTR/ERV1	1	500	(337)	2605167
4636	12.4	22.0	3.4	chr3	70478388	70479385	(127816174)	+	MER11B	LTR/ERVK	1	1236	(0)	2605851
8941	18.4	3.1	0.2	chr3	70614529	70616129	(127679430)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	2	2606047
2478	15.9	4.0	0.2	chr3	70616131	70616540	(127679019)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2606047
3949	13.0	11.0	0.9	chr3	72001607	72002260	(126293299)	+	LTR9A1	LTR/ERV1	1	728	(0)	2608258
2101	23.2	3.8	4.1	chr3	72002261	72002337	(126293222)	C	MER87	LTR/ERV1	(479)	62	1	2608257
759	23.6	0.0	0.0	chr3	73484701	73484861	(124810698)	+	MER5A1	DNA/hAT-Charlie	2	162	(4)	2611248
1976	21.2	16.4	3.3	chr3	75192127	75192789	(123102770)	+	LTR41	LTR/ERVL	2	768	(0)	2613829
33	22.6	0.0	0.0	chr3	76043621	76043688	(122251871)	+	A-rich	Low_complexity	1	68	(0)	2614991
4967	14.0	2.6	3.0	chr3	76661352	76662221	(121633338)	C	MER4D0	LTR/ERV1	(0)	872	6	2615854
3250	10.8	1.9	1.0	chr3	79233729	79234449	(119061110)	C	L1PA16	LINE/L1	(557)	5609	4888	2619205
2672	12.8	9.3	0.4	chr3	79598572	79599059	(118696500)	+	L1PBa	LINE/L1	881	1416	(5447)	2619713
26068	9.3	0.3	0.3	chr3	80307677	80311139	(117984420)	+	HERV30-int	LTR/ERV1	1	3462	(4795)	2620597
436	32.8	3.4	3.9	chr3	81170410	81170615	(117124944)	+	Tigger19b	DNA/TcMar-Tigger	187	391	(159)	2621704
1623	20.5	6.7	4.7	chr3	86381083	86381624	(111913935)	C	MER67C	LTR/ERV1	(4)	510	1	2628205
2520	19.8	10.2	3.5	chr3	95348898	95349574	(102945985)	+	LTR8A	LTR/ERV1	1	727	(0)	2635365
1584	17.6	1.1	6.0	chr3	95407731	95408085	(102887474)	+	MER61C	LTR/ERV1	1	428	(0)	2635438
737	13.5	0.7	4.7	chr3	95408086	95408233	(102887326)	+	MER61-int	LTR/ERV1	2	143	(5074)	2635438
505	8.5	16.1	1.1	chr3	95408310	95408404	(102887155)	+	MER61-int	LTR/ERV1	343	454	(4763)	2635438
3793	14.3	3.4	0.5	chr3	95926914	95927533	(102368026)	C	LTR9B	LTR/ERV1	(0)	644	6	2636090
1532	8.4	1.3	14.3	chr3	101842444	101842708	(96452851)	+	MER30	DNA/hAT-Charlie	1	230	(0)	2643692
3266	15.8	1.1	2.8	chr3	106912993	106913557	(91382002)	+	LTR2752	LTR/ERV1	257	811	(452)	2650131
2930	20.4	3.8	0.0	chr3	106913552	106914160	(91381399)	C	MLT-int	LTR/ERVL-MaLR	(933)	802	170	2650132
462	20.9	16.3	3.2	chr3	108202711	108202928	(90092631)	C	Tigger11a	DNA/TcMar-Tigger	(46)	689	438	2651982
257	31.4	14.5	0.0	chr3	108203022	108203180	(90092379)	+	LTR16A	LTR/ERVL	16	201	(250)	2651983
570	22.2	10.0	0.7	chr3	108203199	108203352	(90092207)	+	LTR16A	LTR/ERVL	278	447	(4)	2651983
454	21.1	3.1	8.9	chr3	109356357	109356491	(88939068)	+	MER5B	DNA/hAT-Charlie	44	170	(8)	2653743
767	16.3	0.8	0.8	chr3	109356496	109356625	(88938934)	C	MER5A1	DNA/hAT-Charlie	(8)	158	29	2653744
5460	15.2	0.6	1.2	chr3	110598509	110599417	(87696142)	+	MER4D	LTR/ERV1	1	903	(0)	2655462
2070	17.1	5.8	2.0	chr3	111108543	111108943	(87186616)	C	MSTB	LTR/ERVL-MaLR	(5)	421	5	2656102
1501	23.0	3.6	2.8	chr3	111108946	111109299	(87186260)	C	MLT1A	LTR/ERVL-MaLR	(14)	360	4	2656103
6220	13.3	13.6	1.8	chr3	112036746	112037828	(86257731)	+	MER11B	LTR/ERVK	1	1232	(4)	2657295
2489	24.4	5.6	7.5	chr3	112303246	112303973	(85991586)	+	HERV3-int	LTR/ERV1	675	1387	(7039)	2657626
4322	8.7	0.0	0.0	chr3	112615537	112616090	(85679469)	+	MER41A	LTR/ERV1	1	554	(0)	2658084
267	23.6	15.3	3.4	chr3	113019839	113019987	(85275572)	+	MER5B	DNA/hAT-Charlie	4	173	(5)	2658589
197	12.9	0.0	0.0	chr3	113020005	113020035	(85275524)	C	MIR3	SINE/MIR	(65)	143	113	2658590
301	26.3	8.0	6.1	chr3	114155531	114155695	(84139864)	C	MER91A	DNA/hAT-Tip100	(20)	176	18	2660374
603	29.0	5.6	0.6	chr3	114214655	114214824	(84080735)	+	X6B_LINE	LINE/CR1	894	1072	(0)	2660475
14	11.7	8.1	0.0	chr3	118760978	118761014	(79534545)	+	(ATAATG)n	Simple_repeat	1	40	(0)	2666648
4107	11.5	3.5	0.3	chr3	119120341	119120985	(79174574)	C	LTR9C	LTR/ERV1	(0)	666	1	2667120
1834	17.9	0.3	0.3	chr3	120469195	120469485	(77826074)	C	AluJb	SINE/Alu	(21)	291	1	2669205
975	23.3	17.0	1.0	chr3	120469486	120469505	(77826054)	+	LTR50	LTR/ERVL	764	785	(10)	2669204
404	18.8	11.8	4.3	chr3	120469521	120469637	(77825922)	C	MLT1B	LTR/ERVL-MaLR	(4)	463	337	2669206
3714	15.2	2.6	2.9	chr3	120469608	120470245	(77825314)	+	MER41B	LTR/ERV1	5	596	(38)	2669207
337	36.1	8.7	3.5	chr3	120503992	120504252	(77791307)	C	MLT1N2	LTR/ERVL-MaLR	(266)	296	21	2669257
1264	24.1	13.8	1.8	chr3	120504320	120504763	(77790796)	+	LTR33	LTR/ERVL	1	506	(9)	2669258
792	26.4	5.1	7.8	chr3	120876237	120876581	(77418978)	+	Charlie8	DNA/hAT-Charlie	78	412	(2016)	2669809
2028	22.5	3.3	1.9	chr3	124774213	124774692	(73520867)	+	MLT1D	LTR/ERVL-MaLR	12	498	(7)	2675841
709	22.0	1.3	2.0	chr3	125862816	125862968	(72432591)	C	MER5A1	DNA/hAT-Charlie	(0)	166	15	2677794
648	22.6	14.8	1.7	chr3	125863166	125863230	(72432329)	C	MLT1D	LTR/ERVL-MaLR	(21)	484	389	2677795
289	30.6	13.1	0.0	chr3	126259757	126259942	(72035617)	C	MamRep137	DNA/TcMar-Tigger	(69)	441	228	2678310
322	27.5	5.7	6.9	chr3	127628620	127628779	(70666780)	C	MIR3	SINE/MIR	(45)	163	6	2680396
11	24.2	5.5	1.7	chr3	129161326	129161380	(69134179)	+	A-rich	Low_complexity	1	58	(0)	2683174
14373	15.5	1.9	2.3	chr3	139487410	139492782	(58802777)	C	L1PB3	LINE/L1	(871)	6694	8	2699390
15	17.7	3.1	0.0	chr3	140093084	140093115	(58202444)	+	GA-rich	Low_complexity	1	33	(0)	2700306
1142	17.8	2.3	0.5	chr3	140342160	140342373	(57953186)	C	MER20	DNA/hAT-Charlie	(0)	219	2	2700703
218	27.1	6.8	0.0	chr3	140737320	140737415	(57558144)	C	L2c	LINE/L2	(7)	3380	3278	2701258
2707	8.8	8.7	0.0	chr3	145111268	145111676	(53183883)	C	LTR7	LTR/ERV1	(2)	448	1	2707924
2326	10.4	4.6	1.3	chr3	145111677	145112055	(53183504)	C	HERVH-int	LTR/ERV1	(0)	7713	7322	2707924
574	28.9	13.0	0.0	chr3	145815823	145816016	(52479543)	C	L2a	LINE/L2	(290)	3136	2914	2708768
841	29.0	5.2	4.1	chr3	145816193	145816627	(52478932)	C	L1MDa	LINE/L1	(6159)	474	35	2708769
8163	19.4	1.6	5.3	chr3	146256181	146257891	(52037668)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	5	2709355
2090	9.9	5.4	0.0	chr3	149130500	149130781	(49164778)	+	AluSx4	SINE/Alu	1	298	(12)	2713103
29917	15.5	2.5	1.3	chr3	149288639	149294589	(49000970)	+	MER52-int	LTR/ERV1	365	6603	(488)	2713341
1983	16.6	0.0	2.9	chr3	149574032	149574339	(48721220)	C	AluJr	SINE/Alu	(13)	299	1	2713844
16	0.0	0.0	0.0	chr3	149574796	149574812	(48720747)	+	(A)n	Simple_repeat	1	17	(0)	2713845
2338	10.2	0.3	1.4	chr3	149574813	149575107	(48720452)	+	AluSx	SINE/Alu	1	292	(20)	2713846
185	26.2	9.7	3.7	chr3	149752626	149752732	(48542827)	C	L2a	LINE/L2	(6)	3420	3307	2714160
217	33.2	7.3	5.7	chr3	153348882	153349162	(44946397)	+	L2	LINE/L2	857	1142	(2277)	2719647
22405	9.5	2.2	1.0	chr3	153640227	153646346	(44649213)	+	L1PBa1	LINE/L1	252	6459	(408)	2720045
189	30.6	5.6	2.3	chr3	156555580	156555666	(41739893)	C	MIR	SINE/MIR	(55)	207	118	2724196
1867	17.4	0.3	0.7	chr3	157274512	157274799	(41020760)	C	AluJr4	SINE/Alu	(25)	287	1	2725259
10602	13.7	1.3	0.2	chr3	162605362	162606973	(35688586)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	2732804
26	11.9	0.0	3.9	chr3	162741425	162741475	(35554084)	+	(TTTC)n	Simple_repeat	1	51	(0)	2732967
1859	14.1	0.0	0.7	chr3	162741479	162741747	(35553812)	C	AluSx1	SINE/Alu	(45)	267	1	2732968
336	30.7	15.2	0.7	chr3	162741785	162741935	(35553624)	+	MER5B	DNA/hAT-Charlie	2	178	(0)	2732969
2335	10.7	0.0	0.3	chr3	167927842	167928139	(30367420)	C	AluSx4	SINE/Alu	(13)	297	1	2739377
568	25.4	0.6	11.1	chr3	167928140	167928182	(30367377)	C	MER5B	DNA/hAT-Charlie	(135)	43	1	2739376
296	36.8	8.3	0.2	chr3	167928183	167928356	(30367203)	+	MIR3	SINE/MIR	16	200	(8)	2739378
1903	15.7	11.2	0.3	chr3	168532462	168532819	(29762740)	+	MER57E2	LTR/ERV1	1	402	(0)	2740201
493	25.2	17.6	7.6	chr3	168621130	168621223	(29674336)	+	MER102b	DNA/hAT-Charlie	4	114	(227)	2740313
2361	16.7	2.4	0.5	chr3	168621224	168621638	(29673921)	C	MSTB	LTR/ERVL-MaLR	(2)	424	2	2740314
1866	11.1	6.4	1.4	chr3	169763178	169763457	(28532102)	+	AluSx	SINE/Alu	7	301	(11)	2741778
12	13.9	0.0	0.0	chr3	169769521	169769544	(28526015)	+	(GCC)n	Simple_repeat	1	24	(0)	2741786
309	28.1	2.8	1.9	chr3	169966448	169966552	(28329007)	+	MER5A	DNA/hAT-Charlie	78	183	(6)	2742119
751	22.4	3.2	2.1	chr3	171429919	171430105	(26865454)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2744508
3824	13.8	5.5	0.4	chr3	171854114	171854838	(26440721)	+	L1M3	LINE/L1	4068	4831	(1309)	2745191
2613	11.5	6.1	1.8	chr3	171854841	171855329	(26440230)	+	MER4B-int	LTR/ERV1	2109	2619	(4139)	2745192
2415	13.3	13.5	5.4	chr3	172607711	172608210	(25687349)	+	MLT2B4	LTR/ERVL	1	547	(9)	2746371
2467	27.1	3.4	2.7	chr3	173352675	173353079	(24942480)	C	L1ME2	LINE/L1	(47)	6290	5866	2747452
2628	9.5	8.7	0.5	chr3	173353080	173353490	(24942069)	C	LTR7	LTR/ERV1	(2)	448	1	2747453
2660	8.6	8.7	0.5	chr3	174232028	174232438	(24063121)	C	LTR7	LTR/ERV1	(2)	448	1	2748675
1716	18.8	11.2	10.0	chr3	174232453	174233013	(24062546)	C	LTR49	LTR/ERV1	(26)	569	1	2748676
2286	14.8	1.3	4.1	chr3	174233014	174233201	(24062358)	C	LTR47B2	LTR/ERVL	(56)	378	203	2748674
2200	9.1	0.7	1.7	chr3	174233202	174233486	(24062073)	+	AluSp	SINE/Alu	2	283	(30)	2748677
347	25.3	18.9	0.0	chr3	174440450	174440599	(23854960)	C	MIR	SINE/MIR	(0)	262	78	2748989
253	21.1	0.0	0.0	chr3	176219993	176220049	(22075510)	+	L1M8	LINE/L1	44	100	(2255)	2751393
27739	2.4	0.0	0.0	chr3	178859949	178865979	(19429580)	+	L1PA2	LINE/L1	124	6155	(0)	2755285
788	26.4	14.8	2.6	chr3	182323423	182324050	(15971509)	+	L2a	LINE/L2	2682	3422	(4)	2760879
27631	2.3	0.2	0.0	chr3	182426093	182432110	(15863449)	+	L1PA2	LINE/L1	126	6151	(4)	2761030
1057	25.3	15.7	1.7	chr3	185807582	185807995	(12487564)	+	MLT1F	LTR/ERVL-MaLR	16	498	(50)	2767127
785	19.3	0.0	2.2	chr3	185807999	185808133	(12487426)	+	FLAM_A	SINE/Alu	1	132	(10)	2767128
3258	17.9	5.2	6.1	chr3	187465482	187465870	(10829689)	C	LTR8A	LTR/ERV1	(321)	406	1	2770194
12	15.3	5.3	2.5	chr3	187990013	187990050	(10305509)	+	(CTGCAT)n	Simple_repeat	1	40	(0)	2771083
261	24.7	8.0	2.4	chr3	189635534	189635616	(8659943)	+	LTR33	LTR/ERVL	172	259	(256)	2773860
2938	13.2	22.1	0.9	chr3	190362051	190362246	(7933313)	+	LTR9A1	LTR/ERV1	461	727	(1)	2774985
3118	19.2	1.4	7.7	chr3	190362247	190362648	(7932911)	+	LTR8	LTR/ERV1	313	691	(0)	2774984
1399	11.7	15.4	4.5	chr3	190424650	190424914	(7870645)	+	AluSx1	SINE/Alu	2	300	(12)	2775099
576	31.1	10.9	3.1	chr3	191688418	191688744	(6606815)	+	L2a	LINE/L2	2805	3156	(270)	2776882
2621	14.0	10.3	0.2	chr3	191688745	191689217	(6606342)	C	LTR22B1	LTR/ERVK	(0)	526	1	2776883
2142	13.1	0.0	0.0	chr3	196647553	196647858	(1647701)	C	AluSx1	SINE/Alu	(6)	306	1	2785470
1078	9.2	0.0	0.0	chr3	196647860	196648001	(1647558)	C	AluSx	SINE/Alu	(170)	142	1	2785471
357	24.0	12.6	1.2	chr3	197580655	197580878	(714681)	+	L1ME4b	LINE/L1	352	548	(376)	2787151
17	29.8	0.0	0.0	chr4	123868	123916	(190090639)	+	(GCGT)n	Simple_repeat	1	49	(0)	2788667
2132	9.9	3.3	0.3	chr4	124019	124310	(190090245)	+	AluSx1	SINE/Alu	1	301	(11)	2788668
12	16.8	7.5	0.0	chr4	1248534	1248573	(188965982)	+	G-rich	Low_complexity	1	43	(0)	2790021
3574	12.5	2.0	1.5	chr4	6058211	6058809	(184155746)	+	LTR10E	LTR/ERV1	1	602	(31)	2797672
2846	13.6	5.0	3.2	chr4	8050028	8050286	(182164269)	+	MER4B	LTR/ERV1	353	766	(0)	2801149
3762	12.5	1.3	1.1	chr4	8357843	8358458	(181856097)	+	MER4D0	LTR/ERV1	1	617	(255)	2801657
4420	7.0	1.3	0.0	chr4	8358459	8359005	(181855550)	+	MER41A	LTR/ERV1	1	554	(0)	2801658
8178	17.9	5.7	0.5	chr4	12049908	12051437	(178163118)	+	MSTB-int	LTR/ERVL-MaLR	1	1614	(37)	2807193
470	32.2	4.7	2.2	chr4	15198746	15198928	(175015627)	+	MIR3	SINE/MIR	1	181	(27)	2812241
434	32.0	11.4	2.7	chr4	16916987	16917297	(173297258)	+	L2b	LINE/L2	2831	3163	(212)	2815203
427	26.7	5.2	3.3	chr4	21569658	21569808	(168644747)	C	LTR33A	LTR/ERVL	(42)	478	325	2822707
259	23.7	14.2	4.9	chr4	24988830	24988931	(165225624)	C	L3	LINE/CR1	(21)	4078	3966	2828094
677	22.8	10.0	5.0	chr4	24988949	24989273	(165225282)	+	LTR81C	LTR/Gypsy	109	463	(887)	2828095
589	26.8	4.9	4.1	chr4	25822252	25822482	(164392073)	+	MIRb	SINE/MIR	16	257	(11)	2829829
2313	9.8	0.3	0.0	chr4	25992881	25993175	(164221380)	C	AluSp	SINE/Alu	(17)	296	1	2830169
1478	24.6	1.9	7.3	chr4	25993176	25993420	(164221135)	C	MLT1C	LTR/ERVL-MaLR	(206)	261	42	2830168
202	32.4	3.9	0.0	chr4	26320446	26320519	(163894036)	+	L2b	LINE/L2	3298	3374	(1)	2830849
1166	29.9	2.6	3.6	chr4	26819460	26820014	(163394541)	+	L2a	LINE/L2	2633	3183	(243)	2831661
4162	10.3	0.2	0.0	chr4	27087021	27087572	(163126983)	C	MER41A	LTR/ERV1	(1)	553	1	2832048
351	28.3	1.7	3.4	chr4	27087582	27087698	(163126857)	C	L3	LINE/CR1	(392)	3707	3593	2832049
3449	15.2	0.8	0.2	chr4	27123460	27123987	(163090568)	+	LTR26B	LTR/ERV1	1	531	(0)	2832120
1148	30.2	9.1	2.5	chr4	28686563	28687092	(161527463)	+	Charlie17b	DNA/hAT-Charlie	153	721	(483)	2834366
1617	29.8	9.2	1.8	chr4	30443440	30443994	(159770561)	C	L1M3c	LINE/L1	(5545)	596	1	2836722
2193	10.5	0.3	3.3	chr4	37389786	37390089	(152824466)	C	AluSx1	SINE/Alu	(17)	295	1	2846034
237	31.0	3.3	4.1	chr4	38002572	38002692	(152211863)	C	L2a	LINE/L2	(0)	3426	3307	2847083
1578	19.9	9.0	3.5	chr4	38002763	38003224	(152211331)	+	LTR54B	LTR/ERV1	8	497	(1)	2847084
2352	11.1	0.0	1.3	chr4	38087561	38087875	(152126680)	+	AluSx	SINE/Alu	2	312	(0)	2847192
585	24.2	22.5	11.7	chr4	40924343	40924848	(149289707)	+	MLT1G1	LTR/ERVL-MaLR	3	579	(0)	2853122
4265	11.6	7.6	3.9	chr4	41327584	41328283	(148886272)	C	LTR9A1	LTR/ERV1	(0)	728	1	2853861
665	23.1	15.7	6.1	chr4	42294294	42294620	(147919935)	+	LTR81A	LTR/Gypsy	1	364	(986)	2855416
241	30.8	3.0	11.2	chr4	42294752	42294930	(147919625)	+	MamGypLTR2c	LTR/Gypsy	305	468	(600)	2855417
2171	18.9	8.9	3.3	chr4	44056788	44057302	(146157253)	+	LTR35A	LTR/ERV1	1	547	(0)	2857763
2422	8.1	14.5	0.5	chr4	52834802	52835186	(137379369)	+	LTR7	LTR/ERV1	1	448	(2)	2866851
182	21.2	0.0	0.0	chr4	52868375	52868407	(137346148)	C	MIR3	SINE/MIR	(90)	118	86	2866901
30	18.9	1.7	0.0	chr4	52868413	52868472	(137346083)	+	GA-rich	Low_complexity	1	61	(0)	2866902
581	28.3	9.3	9.0	chr4	54985188	54985981	(135228574)	C	L1M5	LINE/L1	(2660)	3486	2740	2870188
10005	23.5	4.0	6.1	chr4	54986006	54987827	(135226728)	+	L1MA4A	LINE/L1	719	2471	(5095)	2870193
827	24.4	5.0	1.9	chr4	56425556	56425825	(133788730)	+	MER21C	LTR/ERVL	9	382	(556)	2872586
2278	11.4	1.0	0.0	chr4	56873938	56874236	(133340319)	+	AluSx1	SINE/Alu	1	302	(10)	2873521
4325	11.6	1.2	2.5	chr4	56874237	56874788	(133339767)	C	LTR9D	LTR/ERV1	(92)	553	2	2873520
268	30.6	21.0	0.8	chr4	57544958	57545082	(132669473)	C	MER91A	DNA/hAT-Tip100	(26)	170	14	2874641
335	33.9	10.0	1.2	chr4	57545356	57545600	(132668955)	C	L2b	LINE/L2	(2520)	899	631	2874638
375	34.9	4.1	4.6	chr4	61521114	61521308	(128693247)	C	L2c	LINE/L2	(160)	3227	3034	2879535
19940	9.5	3.1	0.8	chr4	61766614	61769540	(128445015)	C	HERVH-int	LTR/ERV1	(4718)	2995	1	2879846
3065	7.2	0.4	7.7	chr4	61769543	61770025	(128444530)	C	LTR7	LTR/ERV1	(2)	448	1	2879846
626	16.3	2.3	4.4	chr4	61853020	61853154	(128361401)	C	AluSx3	SINE/Alu	(14)	297	166	2879977
546	19.9	4.0	19.0	chr4	61853165	61853369	(128361186)	C	MER21B	LTR/ERVL	(695)	173	1	2879978
1278	18.9	0.6	1.3	chr4	64713100	64713369	(125501186)	C	HUERS-P3-int	LTR/ERV1	(20)	8899	8701	2883492
4235	9.7	3.6	2.9	chr4	67721662	67722290	(122492265)	C	MER41B	LTR/ERV1	(0)	634	1	2887372
3975	15.0	1.3	2.5	chr4	67722291	67722558	(122491997)	+	LTR58	LTR/ERV1	410	673	(6)	2887371
4428	10.9	7.1	3.4	chr4	68403532	68403728	(121810827)	+	MER4D1	LTR/ERV1	1	197	(703)	2888309
2547	4.5	0.0	3.9	chr4	68403729	68404036	(121810519)	+	AluSg7	SINE/Alu	1	296	(13)	2888310
2581	8.5	10.9	0.8	chr4	68405894	68406295	(121808260)	+	LTR7	LTR/ERV1	1	448	(2)	2888313
2370	11.5	26.8	0.8	chr4	68406296	68406569	(121807986)	+	MER4-int	LTR/ERV1	345	816	(5782)	2888311
4059	23.7	8.0	6.4	chr4	68905746	68907106	(121307449)	C	HERV3-int	LTR/ERV1	(7039)	1387	4	2888841
12	17.7	3.1	0.0	chr4	70902282	70902313	(119312242)	+	(CCTCC)n	Simple_repeat	1	33	(0)	2891446
12276	11.7	3.1	1.3	chr4	71856267	71857844	(118356711)	C	MER4B-int	LTR/ERV1	(0)	6758	5081	2892753
3240	9.4	0.6	5.7	chr4	71857845	71858351	(118356204)	+	LTR21A	LTR/ERV1	1	481	(0)	2892754
239	27.5	12.5	0.0	chr4	74037557	74037647	(116176908)	C	MIR	SINE/MIR	(60)	202	99	2895643
13	25.8	0.0	0.0	chr4	74099043	74099079	(116115476)	+	(CAG)n	Simple_repeat	1	37	(0)	2895705
1008	21.6	21.2	2.8	chr4	81913407	81913949	(108300606)	+	LTR50	LTR/ERVL	1	670	(125)	2906840
4981	6.8	5.5	0.5	chr4	82415828	82416480	(107798075)	+	LTR12_	LTR/ERV1	1	688	(0)	2907586
13	5.2	0.0	0.0	chr4	82578948	82578967	(107635588)	+	(ATC)n	Simple_repeat	1	20	(0)	2907861
400	23.3	12.6	5.8	chr4	82578968	82579329	(107635226)	+	MLT1H	LTR/ERVL-MaLR	152	577	(2)	2907862
19	30.4	3.9	1.9	chr4	82900921	82901024	(107313531)	+	(GCGTG)n	Simple_repeat	1	108	(0)	2908437
300	21.4	14.3	0.0	chr4	83034764	83034847	(107179708)	+	MER5C	DNA/hAT-Charlie	216	313	(0)	2908719
23932	10.1	2.4	0.9	chr4	83506441	83509926	(106704629)	C	HERVH48-int	LTR/ERV1	(2532)	4122	586	2909669
1782	23.1	9.9	5.5	chr4	84870234	84870887	(105343668)	+	L1MCa	LINE/L1	5	690	(5355)	2911743
1313	22.8	12.4	9.8	chr4	86922421	86922950	(103291605)	+	LTR41C	LTR/ERVL	1	555	(146)	2914618
10268	11.5	5.1	3.0	chr4	88119344	88120888	(102093667)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2916581
22385	13.3	3.0	2.9	chr4	88177502	88180453	(102034102)	+	L1MA4	LINE/L1	16	3021	(4544)	2916677
2088	10.0	3.1	1.1	chr4	89558593	89558873	(100655682)	C	AluSx1	SINE/Alu	(21)	291	5	2918810
3664	16.5	1.1	7.7	chr4	89558874	89559122	(100655433)	C	MER67C	LTR/ERV1	(459)	252	1	2918808
1356	19.4	9.4	4.8	chr4	90833728	90834100	(99380455)	+	MSTD	LTR/ERVL-MaLR	3	394	(2)	2920448
5315	12.5	15.6	3.7	chr4	91255589	91256671	(98957884)	+	MER11B	LTR/ERVK	1	1236	(0)	2920963
7256	11.8	0.3	0.0	chr4	92253176	92254186	(97960369)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	567	2922045
5174	21.5	4.4	2.9	chr4	92254187	92255466	(97959089)	C	L1P3b	LINE/L1	(5141)	1320	8	2922046
3302	27.6	5.5	5.6	chr4	92255532	92257526	(97957029)	C	L1M2	LINE/L1	(4787)	2062	10	2922047
12526	17.9	3.5	0.2	chr4	92431650	92433806	(97780749)	C	L1MA3	LINE/L1	(5322)	2243	12	2922271
2368	29.3	10.9	4.0	chr4	96736233	96738390	(93476165)	+	L1MEc	LINE/L1	355	2765	(3879)	2928062
748	25.1	9.0	2.4	chr4	98663115	98663489	(91551066)	+	MLT1L	LTR/ERVL-MaLR	163	610	(0)	2930465
1105	21.7	4.9	4.1	chr4	99013428	99013827	(91200728)	C	LTR10C	LTR/ERV1	(51)	582	96	2931139
1884	22.4	4.3	2.2	chr4	101953882	101954338	(88260217)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	2935012
1502	23.2	1.9	9.3	chr4	103429277	103429727	(86784828)	C	ERV3-16A3_LTR	LTR/ERVL	(5)	417	1	2937051
1058	15.8	0.0	2.8	chr4	106305518	106305588	(83908967)	C	AluJo	SINE/Alu	(7)	305	238	2940628
3991	9.2	2.2	0.2	chr4	106305589	106306131	(83908424)	+	MER41A	LTR/ERV1	1	554	(0)	2940629
14	18.2	0.0	4.9	chr4	108650471	108650511	(81564044)	+	(TTTA)n	Simple_repeat	1	41	(0)	2943807
3616	11.1	2.5	2.2	chr4	109386753	109387242	(80827313)	C	LTR9B	LTR/ERV1	(88)	556	64	2944856
2382	7.1	1.3	8.6	chr4	109387243	109387580	(80826975)	+	AluSp	SINE/Alu	1	313	(0)	2944857
2357	23.0	3.1	10.9	chr4	112417936	112418739	(77795816)	C	LTR41	LTR/ERVL	(17)	751	13	2949153
1041	21.9	3.0	6.8	chr4	112645505	112645815	(77568740)	C	AluJb	SINE/Alu	(11)	301	3	2949528
1841	10.3	9.7	0.0	chr4	112645996	112646266	(77568289)	C	AluSx3	SINE/Alu	(8)	303	4	2949529
901	15.9	0.7	0.0	chr4	112753308	112753445	(77461110)	C	Tigger3c	DNA/TcMar-Tigger	(0)	602	464	2949794
2795	9.5	0.3	0.0	chr4	112753446	112753814	(77460741)	+	MER41A	LTR/ERV1	1	370	(184)	2949795
897	28.2	12.2	3.9	chr4	113646267	113646835	(76567720)	C	L2a	LINE/L2	(1)	3425	2814	2951085
886	28.3	13.5	1.0	chr4	114081892	114082210	(76132345)	C	L1MEc	LINE/L1	(5907)	1180	801	2951648
1701	16.1	0.3	9.1	chr4	114495039	114495401	(75719154)	+	AluJo	SINE/Alu	1	312	(0)	2952141
4029	12.7	2.5	0.5	chr4	114495402	114496032	(75718523)	C	LTR9B	LTR/ERV1	(0)	644	1	2952142
1504	9.4	11.2	3.8	chr4	114561858	114562121	(75652434)	C	MER4-int	LTR/ERV1	(6312)	286	1	2952200
3146	10.5	5.1	0.0	chr4	114562124	114562569	(75651986)	C	MER4A1	LTR/ERV1	(2)	470	1	2952200
9436	17.7	0.7	1.5	chr4	115596146	115597789	(74616766)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	2953463
19408	15.8	2.8	2.1	chr4	115850646	115855859	(74358696)	+	L1PA14	LINE/L1	10	5950	(2191)	2953746
1398	19.4	5.2	6.0	chr4	116014933	116015313	(74199242)	+	LTR76	LTR/ERV1	294	675	(0)	2953954
1994	18.6	3.0	0.8	chr4	116015314	116015670	(74198885)	+	HERV3-int	LTR/ERV1	2	366	(8060)	2953954
1927	18.0	1.7	1.4	chr4	118849636	118849995	(71364560)	C	MER47B	DNA/TcMar-Tigger	(0)	418	58	2957597
228	35.2	4.5	7.5	chr4	118850085	118850339	(71364216)	C	L2c	LINE/L2	(230)	3157	2911	2957598
3017	18.3	9.3	0.3	chr4	119774763	119775349	(70439206)	C	LTR9D	LTR/ERV1	(0)	645	1	2958974
379	30.9	6.9	2.2	chr4	121012016	121012194	(69202361)	C	MIR3	SINE/MIR	(8)	200	13	2960515
1128	11.7	0.0	0.0	chr4	121749162	121749324	(68465231)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	228	2961514
1163	23.1	17.3	0.5	chr4	121749325	121749751	(68464804)	+	MLT2B4	LTR/ERVL	1	514	(42)	2961515
2521	9.0	0.0	0.3	chr4	122782736	122783021	(67431534)	+	AluSp	SINE/Alu	1	286	(27)	2963012
40	2.5	0.0	0.0	chr4	122783022	122783062	(67431493)	+	(ATAC)n	Simple_repeat	1	41	(0)	2963013
1669	22.3	7.3	4.8	chr4	122796864	122797305	(67417250)	C	LTR16A1	LTR/ERVL	(0)	456	3	2963032
404	15.6	4.2	3.2	chr4	123304532	123304624	(66909931)	C	UCON68	Unknown	(34)	98	5	2963758
3055	14.3	8.1	2.1	chr4	123378780	123379338	(66835217)	+	LTR49	LTR/ERV1	1	595	(0)	2963879
265	36.6	2.6	4.3	chr4	123564802	123564918	(66649637)	C	MIR3	SINE/MIR	(84)	124	10	2964191
1879	22.6	9.2	1.6	chr4	124738619	124739122	(65475433)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	3	2965687
772	25.4	12.8	5.3	chr4	124739123	124739368	(65475187)	C	LTR79	LTR/ERVL	(209)	318	58	2965686
239	24.7	7.3	2.2	chr4	125011339	125011429	(65203126)	C	LTR79	LTR/ERVL	(286)	241	146	2966035
2163	23.2	12.8	4.0	chr4	125324703	125326031	(64888524)	C	Charlie1a	DNA/hAT-Charlie	(5)	1450	1	2966470
4169	11.0	3.3	0.0	chr4	126714907	126715550	(63499005)	C	LTR9C	LTR/ERV1	(0)	666	1	2968165
12	23.0	2.7	0.0	chr4	127539225	127539261	(62675294)	+	(TTTATT)n	Simple_repeat	1	38	(0)	2969184
1004	25.4	13.7	2.9	chr4	127604844	127605252	(62609303)	C	LTR16B2	LTR/ERVL	(0)	462	3	2969292
1699	20.2	21.2	4.9	chr4	128678138	128678535	(61536020)	+	LTR48	LTR/ERV1	84	624	(163)	2971100
2391	11.9	0.0	0.0	chr4	128678536	128678830	(61535725)	+	AluSx	SINE/Alu	1	295	(17)	2971102
382	27.3	10.1	8.1	chr4	128683278	128683548	(61531007)	+	LTR104_Mam	LTR/Gypsy	346	622	(887)	2971112
606	24.8	10.7	1.8	chr4	130767183	130767404	(59447151)	+	L1MC4a	LINE/L1	5539	5782	(2100)	2973826
2501	9.0	10.7	0.5	chr4	130767409	130767810	(59446745)	+	LTR7	LTR/ERV1	1	448	(2)	2973827
312	32.7	11.9	0.5	chr4	134552133	134552347	(55662208)	C	LTR33A_	LTR/ERVL	(0)	531	289	2978250
2043	25.0	7.3	6.2	chr4	134552375	134553100	(55661455)	+	LTR68	LTR/ERV1	1	735	(5)	2978251
19268	10.4	3.4	0.6	chr4	134680244	134683143	(55531412)	C	HERVH-int	LTR/ERV1	(4728)	2985	1	2978424
2587	8.9	9.6	0.5	chr4	134683146	134683552	(55531003)	C	LTR7	LTR/ERV1	(2)	448	1	2978424
1674	23.4	3.3	3.8	chr4	135184757	135185151	(55029404)	C	MER61-int	LTR/ERV1	(4823)	394	2	2978973
1764	17.1	8.7	8.2	chr4	135185152	135185564	(55028991)	C	MER61C	LTR/ERV1	(0)	428	14	2978973
1442	23.9	1.3	0.7	chr4	135185873	135186181	(55028374)	C	AluJb	SINE/Alu	(1)	311	1	2978976
1182	17.8	3.8	1.3	chr4	135186182	135186435	(55028120)	+	MER4CL34	LTR/ERV1	424	673	(92)	2978969
4176	12.1	2.0	0.2	chr4	136281102	136281733	(53932822)	C	LTR9B	LTR/ERV1	(0)	644	1	2980282
654	13.2	16.6	3.5	chr4	136281734	136281755	(53932800)	+	L1MC2	LINE/L1	955	972	(5073)	2980281
1864	19.7	13.2	3.8	chr4	136281762	136282293	(53932262)	C	LTR49	LTR/ERV1	(5)	590	1	2980283
2133	13.9	0.0	0.0	chr4	137509770	137510064	(52704491)	C	AluSz	SINE/Alu	(17)	295	1	2981755
2825	11.8	11.6	6.1	chr4	137510065	137510309	(52704246)	C	MER41A	LTR/ERV1	(274)	280	1	2981754
551	23.9	0.0	0.0	chr4	137537580	137537692	(52676863)	+	MER5A1	DNA/hAT-Charlie	3	115	(51)	2981788
3042	6.2	0.0	0.0	chr4	137537698	137538086	(52676469)	C	L1PA5	LINE/L1	(2)	6152	5764	2981789
6499	24.1	4.2	0.2	chr4	137710640	137712013	(52502542)	C	L1MA7	LINE/L1	(5232)	1617	187	2982008
664	33.7	14.4	2.1	chr4	139761260	139761387	(50453168)	+	L3	LINE/CR1	3842	3992	(107)	2985209
340	33.2	11.9	5.5	chr4	139761590	139762010	(50452545)	C	L2c	LINE/L2	(4)	3383	2932	2985212
16	0.0	0.0	0.0	chr4	140154108	140154127	(50060428)	+	(CGC)n	Simple_repeat	1	20	(0)	2985804
34	2.4	2.3	2.2	chr4	140154128	140154171	(50060384)	+	(CCT)n	Simple_repeat	1	45	(0)	2985805
18	15.0	2.1	4.1	chr4	140154307	140154354	(50060201)	+	(CGCCCGG)n	Simple_repeat	1	49	(0)	2985806
9692	16.4	1.0	2.3	chr4	145259310	145260606	(44953949)	C	MSTA-int	LTR/ERVL-MaLR	(5)	1646	366	2992639
14	7.8	3.5	3.3	chr4	147617772	147617800	(42596755)	+	(GCA)n	Simple_repeat	1	30	(0)	2995897
449	27.1	15.7	5.8	chr4	147865853	147866075	(42348480)	C	MIR	SINE/MIR	(0)	262	14	2996375
3324	10.0	1.6	15.5	chr4	151049010	151049743	(39164812)	C	LTR1	LTR/ERV1	(153)	630	1	3000719
13	17.4	4.9	2.3	chr4	151761141	151761181	(38453374)	+	GA-rich	Low_complexity	1	43	(0)	3001943
307	15.7	0.0	0.0	chr4	151957523	151957573	(38256982)	+	MER96	DNA/hAT-Tip100	18	68	(107)	3002227
626	32.2	11.7	0.0	chr4	156169748	156170176	(34044379)	C	LTR33A_	LTR/ERVL	(49)	482	3	3008449
493	28.8	4.0	1.8	chr4	156170199	156170368	(34044187)	C	MER63B	DNA/hAT-Blackjack	(21)	415	242	3008450
2877	20.0	2.6	4.7	chr4	158964192	158964526	(31250029)	+	MLT1E3	LTR/ERVL-MaLR	299	624	(0)	3012162
209	26.6	4.2	13.1	chr4	158964527	158964557	(31249998)	C	MIR	SINE/MIR	(115)	147	118	3012160
1909	16.8	4.8	0.8	chr4	158964667	158965026	(31249529)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3012165
1546	25.3	4.2	6.0	chr4	159950286	159950819	(30263736)	C	L1MC4	LINE/L1	(1028)	7014	6491	3013547
16	8.3	0.0	0.0	chr4	159951023	159951048	(30263507)	+	(AAGG)n	Simple_repeat	1	26	(0)	3013548
329	34.2	19.2	1.4	chr4	161393584	161393998	(28820557)	C	LTR33	LTR/ERVL	(0)	515	10	3015272
505	27.8	13.7	5.8	chr4	164700432	164700947	(25513608)	+	LTR41B	LTR/ERVL	1	563	(195)	3019725
1236	12.7	8.5	3.3	chr4	164799510	164799753	(25414802)	C	MLT2B4	LTR/ERVL	(298)	258	1	3019891
444	25.7	1.0	0.0	chr4	164799758	164799858	(25414697)	+	L2a	LINE/L2	3325	3426	(0)	3019885
270	34.1	6.5	0.8	chr4	164799939	164800068	(25414487)	C	MIR3	SINE/MIR	(5)	203	66	3019894
3430	6.9	0.0	0.7	chr4	166716125	166716575	(23497980)	+	LTR7	LTR/ERV1	1	448	(2)	3022699
20377	8.8	5.3	4.9	chr4	166716578	166719851	(23494704)	+	HERVH-int	LTR/ERV1	1	3290	(4423)	3022699
14	23.1	2.1	2.0	chr4	169824035	169824082	(20390473)	+	(CCTGG)n	Simple_repeat	1	49	(0)	3026899
3246	12.7	2.4	0.6	chr4	174855002	174855484	(15359071)	+	LTR9B	LTR/ERV1	1	492	(152)	3033498
4087	17.6	5.8	1.0	chr4	176123271	176124044	(14090511)	C	MER21B	LTR/ERVL	(55)	813	1	3035107
3201	13.1	6.2	1.7	chr4	176357293	176357814	(13856741)	C	MER4A1	LTR/ERV1	(7)	547	1	3035426
4271	14.3	10.9	6.7	chr4	176357816	176358762	(13855793)	C	MER4-int	LTR/ERV1	(5606)	992	1	3035426
3349	16.4	4.1	4.5	chr4	179124056	179124618	(11089937)	C	MER41B	LTR/ERV1	(62)	572	1	3039093
559	28.5	16.6	3.5	chr4	179124619	179124645	(11089910)	C	MLT1E3	LTR/ERVL-MaLR	(593)	34	10	3039092
2288	18.1	1.6	1.2	chr4	179269511	179269934	(10944621)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3039287
2406	17.2	2.1	0.7	chr4	179709648	179710069	(10504486)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	3039858
1251	20.6	15.1	0.3	chr4	179710263	179710573	(10503982)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3039859
419	26.9	3.9	1.9	chr4	179867637	179867818	(10346737)	+	MER101	LTR/ERV1	234	519	(51)	3040028
18	0.0	0.0	0.0	chr4	179867819	179867838	(10346717)	+	(T)n	Simple_repeat	1	20	(0)	3040029
998	26.6	11.3	4.3	chr4	181949410	181949981	(8264574)	+	L2a	LINE/L2	2545	3189	(237)	3042758
3054	8.3	2.9	0.7	chr4	181949982	181950417	(8264138)	+	LTR7	LTR/ERV1	3	448	(2)	3042759
822	25.6	12.6	5.9	chr4	181950418	181950628	(8263927)	+	L2a	LINE/L2	3190	3407	(19)	3042758
13	13.7	2.9	2.9	chr4	182144167	182144200	(8070355)	+	(CTCCT)n	Simple_repeat	1	35	(0)	3043028
29	0.0	0.0	0.0	chr4	182144203	182144227	(8070328)	+	(CA)n	Simple_repeat	1	25	(0)	3043029
2120	9.7	0.3	0.7	chr4	185128071	185128360	(5086195)	C	AluSq2	SINE/Alu	(20)	293	5	3047735
19	16.0	4.2	6.7	chr4	185143506	185143577	(5070978)	+	(GGCGG)n	Simple_repeat	1	75	(0)	3047770
392	30.9	10.7	0.8	chr4	188108009	188108253	(2106302)	+	L2	LINE/L2	2050	2321	(1098)	3052028
197	24.3	3.9	6.3	chr4	188108271	188108349	(2106206)	+	L2	LINE/L2	2396	2472	(947)	3052028
2513	15.6	14.4	3.1	chr4	188399807	188400356	(1814199)	C	MER4CL34	LTR/ERV1	(130)	635	1	3052546
439	24.1	8.1	2.1	chr4	188400441	188400580	(1813975)	C	MLT1D	LTR/ERVL-MaLR	(350)	155	7	3052548
297	27.1	9.9	2.5	chr4	188976976	188977096	(1237459)	+	Eulor11	DNA	224	354	(199)	3053340
23124	11.8	1.4	0.0	chr4	190108264	190111540	(103015)	C	HERVK-int	LTR/ERVK	(1208)	6328	3007	3054628
421	15.2	0.0	0.0	chr5	5523237	5523302	(176014957)	+	MER41C	LTR/ERV1	1	66	(455)	3060644
326	9.5	0.0	0.0	chr5	5523299	5523340	(176014919)	+	MER41C	LTR/ERV1	25	66	(455)	3060644
329	7.0	2.3	0.0	chr5	5523335	5523377	(176014882)	+	MER41C	LTR/ERV1	23	66	(455)	3060644
261	8.3	2.7	0.0	chr5	5523374	5523409	(176014850)	+	MER41C	LTR/ERV1	25	61	(460)	3060644
3768	8.0	1.4	0.0	chr5	5523410	5523899	(176014360)	+	MER41C	LTR/ERV1	25	521	(0)	3060644
432	12.0	4.9	16.4	chr5	10103548	10103619	(171434640)	C	HAL1	LINE/L1	(855)	1652	1579	3066323
2402	9.5	0.0	0.3	chr5	10103620	10103925	(171434334)	C	AluSx3	SINE/Alu	(6)	305	1	3066324
6946	24.0	4.7	3.8	chr5	10156448	10158166	(171380093)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	2	3066423
529	20.9	2.0	4.2	chr5	12272421	12272596	(169265663)	C	MLT1B	LTR/ERVL-MaLR	(19)	448	270	3069365
913	23.2	1.2	5.3	chr5	12272666	12272945	(169265314)	C	MLT1B	LTR/ERVL-MaLR	(200)	267	1	3069365
4303	11.0	1.6	0.6	chr5	12330949	12331586	(169206673)	+	LTR9B	LTR/ERV1	1	644	(0)	3069452
2243	14.7	7.4	1.5	chr5	12332050	12332252	(169206007)	+	LTR59	LTR/ERV1	1	224	(373)	3069453
5089	9.8	5.0	0.0	chr5	12332253	12332994	(169205265)	C	MER4E1	LTR/ERV1	(0)	781	1	3069454
327	28.3	3.8	3.0	chr5	12660346	12660381	(168877878)	C	HAL1	LINE/L1	(347)	2160	2125	3069838
6180	5.8	0.5	0.3	chr5	12660382	12661159	(168877100)	C	LTR17	LTR/ERV1	(0)	780	1	3069839
7596	13.4	16.0	0.1	chr5	12661735	12663059	(168875200)	+	LTR12C	LTR/ERV1	3	1577	(2)	3069841
3774	11.2	8.1	0.2	chr5	18797934	18798526	(162739733)	C	LTR9B	LTR/ERV1	(0)	644	1	3078520
4140	10.3	3.7	1.0	chr5	19047097	19047722	(162490537)	C	LTR9B	LTR/ERV1	(0)	644	1	3078860
876	1.0	0.0	0.0	chr5	21613843	21613942	(159924317)	+	L1PA4	LINE/L1	5798	5897	(258)	3082257
564	26.8	7.9	1.6	chr5	21613944	21614431	(159923828)	+	LTR38	LTR/ERV1	48	602	(9)	3082258
2358	22.2	1.2	2.6	chr5	22488434	22488941	(159049318)	+	MER74A	LTR/ERVL	3	503	(55)	3083489
3840	11.5	2.5	9.5	chr5	23234106	23234799	(158303460)	+	LTR9B	LTR/ERV1	1	644	(0)	3084483
2805	5.3	10.9	0.0	chr5	25445823	25446221	(156092038)	C	LTR7	LTR/ERV1	(2)	448	1	3087341
577	21.9	7.0	9.7	chr5	26482711	26483158	(155055101)	C	LTR35A	LTR/ERV1	(0)	556	127	3088609
671	29.1	4.1	2.1	chr5	28258113	28258351	(153279908)	+	ERV3-16A3_I-int	LTR/ERVL	4979	5222	(4)	3090912
4618	10.2	0.5	0.6	chr5	31361723	31362355	(150175904)	C	MER41B	LTR/ERV1	(2)	632	1	3094814
283	28.1	0.0	4.3	chr5	31362474	31362566	(150175693)	C	MamGypLTR2c	LTR/Gypsy	(977)	91	3	3094815
643	32.0	10.0	5.0	chr5	34474782	34475032	(147063227)	C	MamGypLTR1c	LTR/Gypsy	(0)	803	541	3099831
4309	11.0	8.8	0.3	chr5	34475033	34475698	(147062561)	+	LTR9A1	LTR/ERV1	1	728	(0)	3099832
643	32.7	10.1	4.9	chr5	34475699	34475984	(147062275)	C	MamGypLTR1c	LTR/Gypsy	(263)	540	213	3099831
1613	14.2	2.5	2.8	chr5	34475985	34476267	(147061992)	C	LTR23	LTR/ERV1	(0)	437	156	3099833
4290	7.8	1.1	0.0	chr5	34522323	34522870	(147015389)	C	MER41A	LTR/ERV1	(0)	554	1	3099926
3861	10.1	1.3	0.2	chr5	36089819	36090354	(145447905)	C	MER66C	LTR/ERV1	(13)	542	1	3102280
1102	26.1	6.8	2.9	chr5	36459432	36459810	(145078449)	+	MLT1N2	LTR/ERVL-MaLR	1	395	(167)	3102840
276	22.8	8.9	0.0	chr5	36459840	36459931	(145078328)	+	MLT1N2	LTR/ERVL-MaLR	460	560	(2)	3102840
3975	13.1	2.3	2.5	chr5	38660105	38660746	(142877513)	+	LTR9D	LTR/ERV1	5	645	(0)	3106453
12	17.6	0.0	5.6	chr5	39376916	39376951	(142161308)	+	GA-rich	Low_complexity	1	36	(0)	3107463
2040	9.4	0.7	1.0	chr5	39670264	39670562	(141867697)	C	L1PB1	LINE/L1	(1)	6150	5853	3107921
304	32.9	3.3	2.7	chr5	39670581	39670730	(141867529)	C	LTR85c	LTR/Gypsy?	(44)	779	629	3107922
189	28.3	4.8	0.0	chr5	40756193	40756252	(140782007)	C	L2c	LINE/L2	(52)	3335	3273	3109365
4357	16.6	11.5	4.5	chr5	42319316	42320308	(139217951)	C	MER11C	LTR/ERVK	(0)	1071	1	3111487
1459	23.3	0.6	2.1	chr5	45205186	45205518	(136332741)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	300	3115288
258	35.4	4.0	9.4	chr5	54449734	54449998	(127088261)	+	L2c	LINE/L2	2919	3168	(219)	3121731
8726	1.7	0.8	0.0	chr5	55571080	55572039	(125966220)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3123481
277	23.9	2.3	0.0	chr5	57816745	57816834	(123721425)	+	L2a	LINE/L2	3292	3426	(0)	3127285
1213	33.7	4.8	9.5	chr5	58717132	58717818	(122820441)	C	LTR78B	LTR/ERV1	(170)	1126	459	3128493
301	24.8	9.2	1.5	chr5	59713109	59713239	(121825020)	+	L1ME3Cz	LINE/L1	88	229	(768)	3129864
2092	15.1	4.8	0.3	chr5	59713242	59713580	(121824679)	+	LTR18A	LTR/ERVL	3	357	(0)	3129865
339	34.4	11.1	5.0	chr5	61768441	61768954	(119769305)	+	L2c	LINE/L2	2794	3338	(49)	3132772
2913	18.1	11.2	3.9	chr5	65946395	65947243	(115591016)	C	L1MD1	LINE/L1	(325)	5917	4996	3138718
1244	11.1	2.8	0.0	chr5	65947244	65947415	(115590844)	C	AluSc8	SINE/Alu	(22)	289	113	3138721
17	18.3	0.0	0.0	chr5	66144385	66144421	(115393838)	+	(CGGCTT)n	Simple_repeat	1	37	(0)	3139019
13	30.8	0.0	3.2	chr5	66144565	66144627	(115393632)	+	G-rich	Low_complexity	1	63	(0)	3139020
1822	22.9	6.5	3.3	chr5	68922180	68922761	(112615498)	+	LTR48B	LTR/ERV1	1	644	(0)	3142912
13	24.0	2.2	2.1	chr5	72848148	72848193	(108690066)	+	(CGG)n	Simple_repeat	1	47	(0)	3149599
309	28.7	13.0	1.1	chr5	76499677	76499771	(105038488)	+	MIRb	SINE/MIR	80	187	(81)	3155128
1232	15.2	0.0	1.2	chr5	76499828	76499998	(105038261)	+	AluJo	SINE/Alu	5	173	(139)	3155129
765	18.7	0.0	1.4	chr5	76500001	76500139	(105038120)	+	AluJb	SINE/Alu	176	312	(0)	3155130
806	31.1	2.5	5.2	chr5	78025439	78025846	(103512413)	+	MLT1J	LTR/ERVL-MaLR	58	493	(19)	3157519
2191	11.6	1.3	0.0	chr5	78295242	78295543	(103242716)	+	AluJr	SINE/Alu	1	306	(6)	3157889
2448	22.0	3.5	0.5	chr5	81838538	81839089	(99699170)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	3163699
612	33.1	12.1	1.6	chr5	82296873	82297299	(99240960)	C	L2a	LINE/L2	(7)	3419	2942	3164421
980	31.6	13.3	7.8	chr5	83353991	83355460	(98182799)	+	L2a	LINE/L2	1897	3426	(0)	3165851
437	33.1	4.1	2.1	chr5	84480910	84481100	(97057159)	+	MIRb	SINE/MIR	56	250	(18)	3167317
327	32.4	7.8	3.0	chr5	84481489	84481606	(97056653)	C	MamRep1527	LTR	(612)	357	229	3167318
31	0.0	2.4	4.8	chr5	84481607	84481647	(97056612)	+	(AAC)n	Simple_repeat	1	42	(0)	3167319
3091	16.4	3.0	7.6	chr5	84862011	84862669	(96675590)	+	LTR9D	LTR/ERV1	18	645	(0)	3167813
9419	16.8	1.3	1.4	chr5	86644286	86645939	(94892320)	+	MSTA-int	LTR/ERVL-MaLR	1	1651	(0)	3170072
15	24.4	2.9	4.3	chr5	88883183	88883250	(92655009)	+	(GCGA)n	Simple_repeat	1	70	(0)	3172895
22	29.9	1.4	0.0	chr5	88883219	88883287	(92654972)	+	(GC)n	Simple_repeat	1	70	(0)	3172896
42	7.2	0.0	1.6	chr5	88883299	88883360	(92654899)	+	(GGA)n	Simple_repeat	1	62	(0)	3172897
231	31.1	7.3	11.5	chr5	90477065	90477264	(91060995)	C	L2b	LINE/L2	(126)	3249	3059	3174836
5844	7.4	0.7	0.1	chr5	94354799	94355573	(87182686)	C	MER4E1	LTR/ERV1	(2)	779	1	3179718
2030	13.7	0.0	1.0	chr5	94737686	94737978	(86800281)	C	AluSx	SINE/Alu	(22)	290	1	3180221
496	36.5	3.9	0.8	chr5	95177783	95178028	(86360231)	C	L2	LINE/L2	(1102)	2317	2064	3180780
8747	11.8	3.4	1.9	chr5	95178045	95178366	(86359893)	+	L1PBa	LINE/L1	961	1310	(5552)	3180781
461	29.7	4.5	0.0	chr5	96651972	96652119	(84886140)	C	MIRb	SINE/MIR	(88)	180	26	3182894
188	32.1	3.6	1.9	chr5	101678821	101678874	(79859385)	+	MamRTE1	LINE/RTE-BovB	1499	1553	(2259)	3189190
13	20.8	7.8	3.6	chr5	102296361	102296437	(79241822)	+	(AGCCTCC)n	Simple_repeat	1	83	(0)	3189947
5495	20.1	5.0	1.3	chr5	102561733	102563830	(78974429)	+	L1MA4	LINE/L1	1238	3399	(4166)	3190295
5716	12.8	14.3	2.8	chr5	107346281	107347370	(74190889)	C	MER11B	LTR/ERVK	(0)	1236	1	3196244
509	28.0	4.3	13.8	chr5	107744480	107744864	(73793395)	C	L2c	LINE/L2	(2)	3385	3039	3196732
525	27.3	0.8	0.8	chr5	107744926	107745047	(73793212)	C	L2c	LINE/L2	(534)	2885	2764	3196732
408	25.6	1.6	0.3	chr5	107809810	107809930	(73728329)	C	L2a	LINE/L2	(0)	3426	3253	3196816
207	33.6	4.1	6.7	chr5	107809918	107810067	(73728192)	C	MER5A	DNA/hAT-Charlie	(5)	184	39	3196817
230	28.1	3.0	3.0	chr5	107810142	107810207	(73728052)	+	MIRc	SINE/MIR	109	174	(94)	3196818
258	28.9	2.4	1.2	chr5	110057012	110057095	(71481164)	C	LTR103b_Mam	LTR/ERV1?	(451)	97	13	3199823
1600	15.0	0.8	0.0	chr5	110535808	110536047	(71002212)	+	MER51A	LTR/ERV1	1	242	(392)	3200351
2833	14.3	3.0	3.0	chr5	110536048	110536688	(71001571)	+	HERV4_I-int	LTR/ERV1	42	572	(7244)	3200351
640	15.9	9.8	0.0	chr5	111091902	111092058	(70446201)	C	L1MC5	LINE/L1	(191)	9113	8940	3200971
2068	16.2	13.3	1.1	chr5	111720397	111720839	(69817420)	+	MLT2B1	LTR/ERVL	1	505	(15)	3201798
472	29.3	9.2	1.0	chr5	114311776	114311975	(67226284)	+	MIRc	SINE/MIR	50	267	(1)	3205443
1061	9.0	12.1	0.6	chr5	115328650	115328817	(66209442)	+	LTR9B	LTR/ERV1	5	194	(450)	3206637
328	14.3	2.0	0.0	chr5	115328816	115328864	(66209395)	+	LTR9B	LTR/ERV1	131	180	(464)	3206638
7338	16.1	3.4	0.1	chr5	115368567	115369824	(66168435)	+	MER52A	LTR/ERV1	455	1755	(0)	3206703
2325	9.5	12.0	0.8	chr5	116559248	116559608	(64978651)	+	MER48	LTR/ERV1	1	407	(0)	3208272
353	33.3	0.7	0.0	chr5	116559703	116559852	(64978407)	+	L2b	LINE/L2	2503	2653	(766)	3208273
475	30.6	9.6	7.2	chr5	116559859	116560453	(64977806)	+	L2b	LINE/L2	2776	3374	(1)	3208273
2424	15.9	2.1	3.5	chr5	116947490	116947826	(64590433)	+	L1MB5	LINE/L1	5840	6174	(0)	3208916
1521	25.0	7.7	5.3	chr5	116948068	116948637	(64589622)	C	L1MCc	LINE/L1	(5817)	606	22	3208918
2837	27.2	3.5	4.3	chr5	117071249	117072431	(64465828)	C	L1MA7	LINE/L1	(4364)	2485	1328	3209112
3877	13.2	3.3	0.2	chr5	117748124	117748768	(63789491)	C	LTR9C	LTR/ERV1	(0)	666	1	3209998
1499	31.7	5.8	4.1	chr5	119470165	119470793	(62067466)	C	L1MA5	LINE/L1	(6569)	640	1	3212352
349	30.0	6.1	6.5	chr5	119578947	119578975	(61959284)	+	L1ME5	LINE/L1	5964	5992	(202)	3212506
2133	15.0	9.0	1.5	chr5	119578976	119579374	(61958885)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3212507
1965	25.8	2.0	2.4	chr5	119582991	119583483	(61954776)	+	LTR33A_	LTR/ERVL	8	498	(33)	3212511
20375	9.9	5.5	2.4	chr5	120699774	120702958	(60835301)	C	HERVH-int	LTR/ERV1	(4423)	3290	1	3213829
3394	6.9	0.0	0.7	chr5	120702961	120703411	(60834848)	C	LTR7	LTR/ERV1	(2)	448	1	3213829
295	33.5	4.7	8.8	chr5	122228253	122228854	(59309405)	+	L1M5	LINE/L1	4498	5073	(1073)	3215665
4336	8.8	0.0	1.7	chr5	122228860	122229445	(59308814)	C	LTR17	LTR/ERV1	(0)	780	205	3215668
232	31.4	1.6	1.6	chr5	124476940	124477062	(57061197)	+	LTR82B	LTR/ERVL	234	356	(474)	3218704
20	7.2	3.3	0.0	chr5	124477253	124477282	(57060977)	+	(GA)n	Simple_repeat	1	31	(0)	3218705
15	18.5	0.0	6.1	chr5	124735404	124735452	(56802807)	+	(GCCCAGG)n	Simple_repeat	1	49	(0)	3219039
437	31.5	6.7	2.2	chr5	125237036	125237220	(56301039)	+	MLT1K	LTR/ERVL-MaLR	101	294	(301)	3219796
514	27.0	6.1	1.1	chr5	125237270	125237456	(56300803)	+	MLT1K	LTR/ERVL-MaLR	391	587	(8)	3219796
1944	19.7	3.7	3.3	chr5	125669359	125669398	(55868861)	C	Charlie4a	DNA/hAT-Charlie	(4)	504	466	3220317
359	22.6	23.0	0.0	chr5	126009760	126009923	(55528336)	C	MLT1L	LTR/ERVL-MaLR	(397)	213	1	3220668
42	21.1	1.0	1.0	chr5	127517502	127517601	(54020658)	+	G-rich	Low_complexity	1	101	(0)	3222955
2411	5.2	0.0	0.3	chr5	134039323	134039627	(47498632)	C	AluY	SINE/Alu	(6)	305	2	3231812
457	23.8	1.9	8.5	chr5	134039628	134039668	(47498591)	C	MER5B	DNA/hAT-Charlie	(114)	64	25	3231811
10106	15.7	1.0	2.2	chr5	135615129	135616780	(45921479)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	3234567
4563	14.6	2.0	2.4	chr5	136564913	136565339	(44972920)	C	L1PA16	LINE/L1	(437)	5729	5304	3235829
3370	7.6	0.0	0.7	chr5	136565340	136565790	(44972469)	C	LTR7	LTR/ERV1	(2)	448	1	3235831
299	27.8	14.2	1.2	chr5	138470322	138470492	(43067767)	C	L2c	LINE/L2	(104)	3283	3087	3238924
2159	9.7	0.3	1.0	chr5	138632818	138633127	(42905132)	C	AluSg7	SINE/Alu	(1)	308	1	3239252
540	19.2	0.9	0.9	chr5	138633128	138633232	(42905027)	C	MLT1J	LTR/ERVL-MaLR	(337)	175	71	3239253
5058	7.2	11.9	12.4	chr5	139502943	139503773	(42034486)	+	LTR12	LTR/ERV1	1	826	(0)	3240906
224	32.4	27.6	0.5	chr5	139523998	139524183	(42014076)	+	MIRb	SINE/MIR	24	262	(0)	3240944
430	29.9	10.2	1.1	chr5	141838783	141838968	(39699291)	+	MIRb	SINE/MIR	42	246	(22)	3244719
226	25.0	12.1	0.8	chr5	142362779	142362895	(39175364)	C	MIR	SINE/MIR	(46)	216	85	3245812
261	30.6	0.0	0.0	chr5	143014325	143014396	(38523863)	C	MIRc	SINE/MIR	(5)	263	192	3247053
1288	19.4	13.9	0.2	chr5	143037416	143037832	(38500427)	C	Charlie4a	DNA/hAT-Charlie	(0)	508	27	3247091
2970	17.5	4.6	6.0	chr5	144011717	144012012	(37526247)	C	MER57A-int	LTR/ERV1	(5123)	1064	752	3248613
2359	10.5	0.0	1.6	chr5	144012013	144012326	(37525933)	+	AluSx1	SINE/Alu	2	310	(2)	3248621
458	33.2	10.2	3.1	chr5	144298775	144299029	(37239230)	C	LTR103b_Mam	LTR/ERV1?	(242)	306	32	3249082
307	18.7	10.8	0.0	chr5	146788907	146788980	(34749279)	+	L2c	LINE/L2	3283	3387	(0)	3253168
309	32.7	8.6	3.4	chr5	147567819	147568027	(33970232)	C	MamSINE1	SINE/tRNA-RTE	(41)	249	29	3254496
542	30.1	4.1	5.0	chr5	147568214	147568433	(33969826)	C	MIRb	SINE/MIR	(14)	254	37	3254497
2397	19.4	7.5	1.0	chr5	147874857	147875377	(33662882)	C	MER74A	LTR/ERVL	(0)	558	1	3254973
224	32.5	4.0	2.4	chr5	149564321	149564443	(31973816)	C	MIRb	SINE/MIR	(120)	148	24	3258001
2370	7.5	1.0	0.0	chr5	149564543	149564834	(31973425)	+	AluSp	SINE/Alu	1	295	(18)	3258002
327	26.9	6.0	0.7	chr5	151356977	151357118	(30181141)	C	MIRc	SINE/MIR	(23)	245	96	3261724
18	0.0	0.0	0.0	chr5	151924884	151924903	(29613356)	+	(T)n	Simple_repeat	1	20	(0)	3262871
360	27.1	17.0	12.7	chr5	153350442	153350788	(28187471)	C	L2a	LINE/L2	(3)	3423	3059	3265075
2327	6.7	3.4	0.0	chr5	154682189	154682471	(26855788)	C	AluSx	SINE/Alu	(19)	293	1	3267768
3681	14.3	6.0	7.2	chr5	156042410	156043145	(25495114)	C	LTR8A	LTR/ERV1	(0)	727	1	3270247
1021	22.5	8.0	1.4	chr5	156798107	156798386	(24739873)	C	LTR49	LTR/ERV1	(25)	570	271	3271382
1191	13.9	0.0	1.0	chr5	156798461	156798656	(24739603)	+	L1PA8	LINE/L1	5979	6172	(0)	3271383
573	30.8	5.1	2.0	chr5	156914614	156914858	(24623401)	+	MIR	SINE/MIR	3	255	(7)	3271608
2560	5.2	0.3	1.0	chr5	158174514	158174822	(23363437)	+	AluY	SINE/Alu	1	307	(4)	3274157
428	25.9	4.7	0.9	chr5	160160570	160160735	(21377524)	+	MIRb	SINE/MIR	18	192	(76)	3277526
4377	10.4	1.9	1.1	chr5	160166867	160167495	(21370764)	C	MER41B	LTR/ERV1	(0)	634	1	3277543
527	30.1	11.6	7.1	chr5	160167622	160167957	(21370302)	C	L2c	LINE/L2	(58)	3329	2977	3277544
18	23.7	0.0	0.0	chr5	160438694	160438733	(21099526)	+	(T)n	Simple_repeat	1	40	(0)	3278157
355	29.3	5.9	3.8	chr5	160438809	160439008	(21099251)	C	MIRb	SINE/MIR	(14)	254	46	3278158
1887	21.4	6.3	9.2	chr5	162274475	162275050	(19263209)	C	MER74A	LTR/ERVL	(0)	558	1	3280940
24	0.0	0.0	0.0	chr5	166074125	166074150	(15464109)	+	(A)n	Simple_repeat	1	26	(0)	3286215
2162	18.0	7.1	5.8	chr5	166074258	166074759	(15463500)	C	MER67D	LTR/ERV1	(5)	509	1	3286216
28	4.8	4.5	0.0	chr5	166074764	166074856	(15463403)	+	(TTCTT)n	Simple_repeat	1	97	(0)	3286217
727	16.8	6.8	0.8	chr5	166074857	166074981	(15463278)	C	FLAM_C	SINE/Alu	(10)	133	1	3286218
27	28.4	2.9	1.9	chr5	166074982	166074991	(15463268)	+	(TCTTC)n	Simple_repeat	1	9	(0)	3286219
501	34.6	8.8	4.1	chr5	166075012	166075544	(15462715)	C	LTR85c	LTR/Gypsy?	(166)	657	98	3286220
1774	22.8	9.1	0.8	chr5	167392255	167392727	(14145532)	+	MLT2B1	LTR/ERVL	3	518	(2)	3288267
548	30.4	4.4	2.9	chr5	167699762	167700005	(13838254)	C	MIR	SINE/MIR	(13)	249	2	3288728
1810	19.9	0.3	0.0	chr5	167726448	167726758	(13811501)	C	AluJb	SINE/Alu	(0)	312	1	3288769
12	19.0	7.1	0.0	chr5	170744230	170744271	(10793988)	+	(GGATG)n	Simple_repeat	1	45	(0)	3294227
2270	16.5	9.3	0.0	chr5	170760714	170761149	(10777110)	+	MER31A	LTR/ERV1	1	481	(4)	3294254
248	28.1	10.0	4.9	chr5	170761301	170761442	(10776817)	+	MIRb	SINE/MIR	16	165	(103)	3294255
194	22.8	15.1	1.2	chr5	170761975	170762054	(10776205)	C	L2c	LINE/L2	(113)	3274	3182	3294257
2801	8.1	8.7	0.5	chr5	170762081	170762491	(10775768)	C	LTR7	LTR/ERV1	(2)	448	1	3294258
720	30.3	12.3	1.3	chr5	171979593	171979696	(9558563)	+	L1ME2	LINE/L1	4910	5036	(1110)	3296406
4871	5.1	0.0	0.0	chr5	171979697	171980287	(9557972)	C	LTR10C	LTR/ERV1	(0)	591	1	3296407
28	20.1	0.0	0.0	chr5	173616546	173616603	(7921656)	+	(GGC)n	Simple_repeat	1	58	(0)	3299921
268	32.0	7.3	4.3	chr5	173668943	173668991	(7869268)	+	L2b	LINE/L2	3234	3286	(140)	3300020
1661	21.1	9.6	3.3	chr5	173668992	173669418	(7868841)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	3300022
2167	8.6	6.1	0.0	chr5	175377015	175377292	(6160967)	+	AluSx	SINE/Alu	1	296	(16)	3303327
222	26.9	3.7	2.5	chr5	175603856	175603935	(5934324)	C	MIRc	SINE/MIR	(0)	268	188	3303738
341	22.9	7.6	3.9	chr5	176837948	176838074	(4700185)	C	L2a	LINE/L2	(0)	3426	3295	3306091
20	21.6	4.9	1.6	chr5	177446749	177446809	(4091450)	+	(CG)n	Simple_repeat	1	64	(0)	3307433
3661	16.8	9.8	4.3	chr5	178179579	178180372	(3357887)	C	MER21B	LTR/ERVL	(2)	866	24	3308729
544	26.4	4.9	0.0	chr5	178180377	178180531	(3357728)	C	L2	LINE/L2	(1039)	2380	2218	3308730
1732	17.3	7.1	0.8	chr5	178180544	178180898	(3357361)	+	LTR9D	LTR/ERV1	175	553	(92)	3308731
4377	16.9	14.6	3.1	chr5	181069831	181070864	(467395)	C	MER52C	LTR/ERV1	(105)	1173	1	3313602
728	1.2	0.0	0.0	chr5	181174044	181174125	(364134)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3313785
638	0.0	1.4	0.0	chr5	181191687	181191758	(346501)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	3313826
13	9.3	5.3	5.0	chr5	181191960	181191997	(346262)	+	G-rich	Low_complexity	1	40	(0)	3313827
606	5.6	0.0	0.0	chr5	181206868	181206939	(331320)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	3313850
2114	9.4	0.0	0.0	chr5	181207128	181207394	(330865)	+	AluSg	SINE/Alu	1	267	(43)	3313851
3900	16.1	10.5	9.8	chr5	181279892	181281569	(256690)	+	REP522	Satellite/telo	1	1690	(1255)	3313977
392	35.2	12.8	3.1	chr6	4503138	4503753	(166302226)	C	Plat_L3	LINE/CR1	(148)	3438	2754	3320552
911	20.0	0.6	0.0	chr6	4503939	4504103	(166301876)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	3320553
4346	12.1	0.0	2.2	chr6	5541644	5542291	(165263688)	C	MER41B	LTR/ERV1	(0)	634	1	3322203
1262	21.1	8.1	5.0	chr6	5542292	5542471	(165263508)	C	L1ME1	LINE/L1	(379)	6595	6392	3322202
1421	14.5	0.5	0.5	chr6	7684740	7684953	(163121026)	+	AluJo	SINE/Alu	86	299	(13)	3325572
363	19.1	3.3	5.3	chr6	7685034	7685127	(163120852)	+	MamTip3	DNA/hAT-Tip100	245	336	(164)	3325573
263	32.6	5.0	1.7	chr6	8019953	8020186	(162785793)	+	Tigger15a	DNA/TcMar-Tigger	367	608	(107)	3326038
30	6.0	0.0	0.0	chr6	9456190	9456224	(161349755)	+	(TC)n	Simple_repeat	1	35	(0)	3328102
14	0.0	0.0	4.5	chr6	10307431	10307452	(160498527)	+	(AGC)n	Simple_repeat	1	22	(0)	3329284
292	23.3	2.7	5.2	chr6	10307753	10307829	(160498150)	C	UCON21	DNA?	(173)	157	83	3329285
30	14.2	1.8	0.0	chr6	12887004	12887058	(157918921)	+	(CTC)n	Simple_repeat	1	56	(0)	3333362
2151	10.9	2.7	0.3	chr6	14861839	14862131	(155943848)	+	AluSq2	SINE/Alu	1	300	(13)	3336675
19	11.6	0.0	0.0	chr6	15209021	15209049	(155596930)	+	(AT)n	Simple_repeat	1	29	(0)	3337552
2077	8.8	0.4	0.4	chr6	15209050	15209312	(155596667)	C	AluSp	SINE/Alu	(49)	264	2	3337553
342	29.9	10.2	2.1	chr6	15243942	15244161	(155561818)	C	MIRc	SINE/MIR	(16)	252	11	3337656
4557	11.2	0.6	0.6	chr6	15895642	15896271	(154909708)	C	MER41B	LTR/ERV1	(2)	632	3	3338638
644	25.2	12.8	1.4	chr6	15961299	15961580	(154844399)	C	MLT2F	LTR/ERVL	(319)	344	26	3338763
510	32.5	10.4	0.4	chr6	15961601	15961850	(154844129)	C	L3	LINE/CR1	(1532)	2567	2290	3338755
1835	10.1	0.5	0.0	chr6	18336987	18337205	(152468774)	+	AluSz	SINE/Alu	2	221	(91)	3342898
19	3.8	0.0	0.0	chr6	18337222	18337248	(152468731)	+	(AAAC)n	Simple_repeat	1	27	(0)	3342899
13	25.0	4.6	2.9	chr6	19312171	19312190	(151493789)	+	(TCTC)n	Simple_repeat	1	67	(0)	3344246
15	21.9	0.0	2.3	chr6	19312191	19312234	(151493745)	+	(TTTCTC)n	Simple_repeat	1	44	(0)	3344247
2198	11.3	0.0	0.0	chr6	24389560	24389850	(146416129)	+	AluSg	SINE/Alu	5	295	(15)	3351821
15	20.5	0.0	2.4	chr6	25652156	25652196	(145153783)	+	G-rich	Low_complexity	1	41	(0)	3353909
33	0.0	0.0	0.0	chr6	25882463	25882490	(144923489)	+	(AC)n	Simple_repeat	1	28	(0)	3354243
679	0.0	0.0	0.0	chr6	26532917	26532990	(144272989)	C	tRNA-Thr-ACY_	tRNA	(3)	74	1	3355416
631	4.1	0.0	0.0	chr6	26571864	26571936	(144234043)	C	tRNA-Ala-GCY	tRNA	(3)	73	1	3355497
748	0.0	0.0	0.0	chr6	27495814	27495895	(143310084)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3356989
748	2.4	0.0	0.0	chr6	27505828	27505909	(143300070)	C	tRNA-Ser-TCA_	tRNA	(3)	82	1	3357009
788	0.0	0.0	0.0	chr6	27545689	27545770	(143260209)	+	tRNA-Ser-TCA_	tRNA	1	82	(3)	3357088
2277	12.7	0.0	0.9	chr6	27602220	27602534	(143203445)	C	AluSx1	SINE/Alu	(0)	312	1	3357201
595	0.0	0.0	22.2	chr6	27602568	27602675	(143203304)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3357202
633	2.7	0.0	0.0	chr6	27668583	27668657	(143137322)	+	tRNA-Ile-ATT	tRNA	1	75	(2)	3357335
2229	9.2	0.7	0.7	chr6	27672004	27672297	(143133682)	C	AluSz	SINE/Alu	(18)	294	1	3357340
692	6.0	0.0	0.0	chr6	27672448	27672531	(143133448)	C	tRNA-Ser-TCG	tRNA	(1)	84	1	3357341
648	1.4	0.0	0.0	chr6	27688188	27688261	(143117718)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	3357376
2177	9.6	0.4	0.0	chr6	27693488	27693795	(143112184)	C	AluSx3	SINE/Alu	(0)	311	1	3357390
299	17.9	3.5	5.6	chr6	27693796	27693884	(143112095)	+	L1MC5	LINE/L1	9196	9282	(22)	3357391
2416	6.0	1.3	0.0	chr6	28790370	28790670	(142015309)	+	AluSp	SINE/Alu	2	306	(7)	3359224
15	14.4	0.0	0.0	chr6	28790694	28790718	(142015261)	+	(A)n	Simple_repeat	1	25	(0)	3359225
661	1.4	0.0	0.0	chr6	28790722	28790794	(142015185)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	3359226
745	26.4	4.3	7.6	chr6	29662165	29662202	(141143777)	C	L1MC5	LINE/L1	(1)	9303	9270	3360446
2400	7.2	0.7	0.3	chr6	29662203	29662495	(141143484)	+	AluSp	SINE/Alu	2	295	(18)	3360447
214	30.8	0.0	0.0	chr6	30213982	30214046	(140591933)	C	MIRc	SINE/MIR	(114)	154	90	3361269
2190	9.6	1.7	0.0	chr6	31197229	31197520	(139608459)	C	AluSx1	SINE/Alu	(14)	298	2	3363000
13	21.1	2.6	0.0	chr6	33143122	33143159	(137662820)	+	A-rich	Low_complexity	1	39	(0)	3365892
30	0.0	0.0	0.0	chr6	33789334	33789362	(137016617)	+	(TTTTG)n	Simple_repeat	1	29	(0)	3367133
204	30.9	1.2	6.9	chr6	33789412	33789498	(137016481)	+	L2b	LINE/L2	3294	3375	(0)	3367134
299	33.2	11.0	2.3	chr6	36341173	36341309	(134464670)	C	MIRb	SINE/MIR	(13)	255	106	3372285
2161	10.5	3.3	0.3	chr6	36341310	36341604	(134464375)	+	AluSz	SINE/Alu	1	304	(8)	3372286
2364	19.4	2.7	5.1	chr6	38902147	38902716	(131903263)	+	MER74A	LTR/ERVL	3	558	(0)	3377176
292	28.8	18.2	2.7	chr6	39136959	39137254	(131668725)	C	L2c	LINE/L2	(19)	3368	3017	3377510
659	23.9	2.3	0.6	chr6	41318581	41318748	(129487231)	+	MER5B	DNA/hAT-Charlie	7	177	(1)	3380943
378	27.9	8.0	0.0	chr6	41966029	41966132	(128839847)	+	MIRb	SINE/MIR	87	199	(69)	3382199
1137	17.1	4.8	0.5	chr6	41966235	41966433	(128839546)	+	AluJr	SINE/Alu	90	297	(15)	3382200
234	24.1	0.0	3.3	chr6	44202995	44203054	(126602925)	C	MIR3	SINE/MIR	(66)	142	85	3386762
210	20.0	2.4	0.0	chr6	44203253	44203292	(126602687)	+	MIRb	SINE/MIR	30	70	(198)	3386763
12	16.4	5.9	0.0	chr6	44246276	44246309	(126559670)	+	(CATCC)n	Simple_repeat	1	36	(0)	3386851
249	28.8	18.0	0.5	chr6	44663184	44663375	(126142604)	+	Tigger15a	DNA/TcMar-Tigger	286	518	(197)	3387586
746	18.0	5.1	0.0	chr6	46749900	46750049	(124055930)	C	MER5A	DNA/hAT-Charlie	(5)	184	27	3390669
8929	15.3	3.6	8.3	chr6	47427923	47429657	(123376322)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1651	1	3391737
4093	11.9	3.0	0.6	chr6	49339020	49339669	(121466310)	+	LTR9C	LTR/ERV1	1	666	(0)	3394227
2673	11.6	3.4	1.4	chr6	49342361	49342796	(121463183)	+	LTR9C	LTR/ERV1	35	479	(187)	3394233
21	24.3	2.6	3.8	chr6	49550052	49550128	(121255851)	+	GA-rich	Low_complexity	1	79	(0)	3394542
2435	12.8	6.6	0.2	chr6	49911232	49911630	(120894349)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3395030
2993	0.3	0.0	0.3	chr6	52995620	52995951	(117810028)	+	7SK	RNA	1	331	(0)	3399374
23	9.7	0.0	6.0	chr6	52995981	52996040	(117809939)	+	(TTTTTAA)n	Simple_repeat	1	56	(0)	3399375
1838	26.6	14.0	3.6	chr6	56794339	56795554	(114010425)	+	HAL1	LINE/L1	47	1501	(964)	3404624
397	30.8	2.5	1.9	chr6	62516632	62516790	(108289189)	+	MER5B	DNA/hAT-Charlie	18	177	(1)	3409346
15	20.2	0.0	0.0	chr6	69232974	69233007	(101572972)	+	(GCT)n	Simple_repeat	1	34	(0)	3417699
391	31.1	18.8	4.3	chr6	71181473	71181869	(99624110)	C	L2c	LINE/L2	(5)	3382	2915	3420228
232	34.2	9.7	5.1	chr6	71181988	71182144	(99623835)	C	L2c	LINE/L2	(1060)	2359	2195	3420228
2292	7.4	1.1	0.3	chr6	73514185	73514468	(97291511)	C	AluY	SINE/Alu	(24)	287	2	3423639
957	17.0	23.6	0.0	chr6	73514470	73514693	(97291286)	C	AluSc8	SINE/Alu	(18)	293	1	3423640
317	24.3	2.6	0.0	chr6	76120482	76120555	(94685424)	+	MamGypLTR3a	LTR/Gypsy	119	194	(787)	3427287
2626	6.9	11.1	0.0	chr6	76562300	76562692	(94243287)	+	LTR7	LTR/ERV1	3	444	(6)	3427815
244	29.8	10.9	4.5	chr6	76562763	76563026	(94242953)	C	L1MEi	LINE/L1	(134)	2078	1796	3427816
853	29.4	11.0	3.2	chr6	81789781	81790352	(89015627)	C	L2a	LINE/L2	(5)	3421	2806	3434253
12	15.8	0.0	3.3	chr6	83859587	83859616	(86946363)	+	(CTCC)n	Simple_repeat	1	30	(0)	3437073
350	24.2	0.1	0.0	chr6	85679445	85679519	(85126460)	C	MIRc	SINE/MIR	(53)	155	81	3439431
1185	26.4	11.7	11.6	chr6	85923006	85923772	(84882207)	+	LTR41	LTR/ERVL	1	768	(0)	3439731
39879	5.4	2.1	0.4	chr6	88725122	88730135	(82075844)	+	HERVIP10FH-int	LTR/ERV1	1	5102	(0)	3443484
1742	17.7	11.3	0.0	chr6	90478005	90478366	(80327613)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3446459
376	35.0	10.7	5.2	chr6	90493909	90494076	(80311903)	C	L2b	LINE/L2	(190)	3185	3010	3446491
207	36.8	10.6	2.8	chr6	90494296	90494695	(80311284)	+	L2c	LINE/L2	2910	3344	(43)	3446493
1501	27.7	14.4	2.5	chr6	93721413	93722104	(77083875)	+	LTR50	LTR/ERVL	7	795	(0)	3450427
2896	1.0	0.0	0.0	chr6	93824634	93824936	(76981043)	C	AluYa5	SINE/Alu	(8)	303	1	3450580
1519	21.0	1.7	3.6	chr6	93824937	93825164	(76980815)	+	MLT1A0	LTR/ERVL-MaLR	140	362	(3)	3450579
3978	27.1	6.7	3.3	chr6	93825165	93825902	(76980077)	C	L1MEf	LINE/L1	(2798)	3521	2772	3450578
4347	9.3	5.9	1.8	chr6	95583936	95584908	(75221071)	+	MER11A	LTR/ERVK	1	1266	(0)	3452647
3363	5.8	0.0	2.6	chr6	97779488	97779947	(73026032)	+	LTR7	LTR/ERV1	1	448	(2)	3455484
20668	9.1	0.9	2.7	chr6	97779950	97782999	(73022980)	+	HERVH-int	LTR/ERV1	1	2995	(4718)	3455484
3145	17.3	3.6	0.7	chr6	99802201	99802787	(71003192)	C	MER6A	DNA/TcMar-Tigger	(0)	605	1	3458158
25681	6.6	0.6	0.1	chr6	100908126	100914267	(69891712)	C	L1PA4	LINE/L1	(1)	6327	178	3459638
11	10.6	0.0	10.5	chr6	104941037	104941074	(65864905)	+	G-rich	Low_complexity	1	38	(0)	3464694
2308	10.6	0.3	0.0	chr6	106968708	106969009	(63836970)	+	AluSp	SINE/Alu	1	303	(10)	3467854
255	29.2	21.5	0.0	chr6	106997592	106997697	(63808282)	+	MIRb	SINE/MIR	42	176	(92)	3467925
3547	12.8	13.4	4.7	chr6	107988365	107989060	(62816919)	+	MER4E	LTR/ERV1	1	766	(0)	3469735
842	24.9	2.8	0.0	chr6	109855333	109855505	(60950474)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	3472771
732	13.2	5.6	8.7	chr6	109855549	109855697	(60950282)	+	LTR54B	LTR/ERV1	1	144	(366)	3472772
535	14.7	0.0	0.0	chr6	109855700	109855774	(60950205)	+	AluSq10	SINE/Alu	5	79	(234)	3472773
2740	8.6	8.9	0.5	chr6	109855775	109856184	(60949795)	C	LTR7	LTR/ERV1	(2)	448	1	3472774
1568	12.8	7.7	0.6	chr6	110511501	110511864	(60294115)	+	LTR35	LTR/ERV1	158	547	(0)	3473768
1857	21.4	12.2	0.7	chr6	111949552	111950008	(58855971)	+	MLT1E2	LTR/ERVL-MaLR	111	627	(0)	3476422
16	0.0	0.0	4.2	chr6	113971649	113971672	(56834307)	+	(TTA)n	Simple_repeat	1	24	(0)	3479423
181	30.6	0.0	6.5	chr6	114362317	114362393	(56443586)	C	MER5A1	DNA/hAT-Charlie	(88)	78	9	3479997
3885	13.5	10.9	1.5	chr6	115415331	115416057	(55389922)	C	MER4D0	LTR/ERV1	(68)	804	1	3481276
986	29.5	2.2	10.4	chr6	115456720	115457169	(55348810)	+	MLT1H	LTR/ERVL-MaLR	1	412	(137)	3481328
1710	16.6	0.7	1.1	chr6	116106914	116107184	(54698795)	+	AluJb	SINE/Alu	4	273	(39)	3482142
297	29.0	12.7	2.7	chr6	117072973	117073192	(53732787)	+	L2c	LINE/L2	3105	3349	(38)	3483434
1979	22.1	3.4	1.8	chr6	118686204	118686718	(52119261)	C	L1ME1	LINE/L1	(0)	6179	5656	3485513
3397	13.8	1.9	0.6	chr6	123588009	123588542	(47217437)	C	MER4D	LTR/ERV1	(362)	541	1	3491873
362	17.9	3.5	1.2	chr6	123588594	123588678	(47217301)	C	MLT1A	LTR/ERVL-MaLR	(2)	372	286	3491875
1192	29.8	2.1	5.2	chr6	123769575	123770017	(47035962)	C	LTR16	LTR/ERVL	(3)	435	7	3492143
24	21.1	0.0	0.0	chr6	125780118	125780166	(45025813)	+	A-rich	Low_complexity	1	49	(0)	3494810
626	0.0	0.0	0.0	chr6	125780247	125780318	(45025661)	C	tRNA-Glu-GAG_	tRNA	(3)	72	1	3494811
15	10.1	2.9	2.9	chr6	127266776	127266809	(43539170)	+	G-rich	Low_complexity	1	35	(0)	3496650
581	23.1	13.6	4.2	chr6	127483490	127483701	(43322278)	C	MER102b	DNA/hAT-Charlie	(59)	282	48	3496949
27508	2.6	0.1	0.2	chr6	129167161	129173198	(41632781)	C	L1PA2	LINE/L1	(0)	6155	124	3499110
6585	12.2	3.3	1.8	chr6	130644483	130645535	(40160444)	C	MER11C	LTR/ERVK	(2)	1069	1	3501188
2550	8.3	4.3	0.3	chr6	131328312	131328687	(39477292)	+	HERVH-int	LTR/ERV1	7322	7713	(0)	3502167
3673	5.8	0.2	0.7	chr6	131328688	131329137	(39476842)	+	LTR7	LTR/ERV1	1	448	(2)	3502167
2719	9.9	3.9	2.3	chr6	131859582	131860015	(38945964)	C	LTR3A	LTR/ERVK	(40)	444	4	3503020
792	12.2	1.8	0.0	chr6	131860017	131860123	(38945856)	C	AluSc	SINE/Alu	(199)	110	2	3503021
2137	7.0	0.4	0.4	chr6	132813784	132814042	(37991937)	+	AluSq2	SINE/Alu	1	259	(54)	3504375
15	21.1	2.2	2.1	chr6	132814792	132814837	(37991142)	+	G-rich	Low_complexity	1	47	(0)	3504376
455	21.9	11.1	2.9	chr6	133170360	133170533	(37635446)	C	MER53	DNA/hAT	(1)	192	3	3504878
443	22.5	6.4	9.5	chr6	134074398	134074608	(36731371)	+	MamGypLTR1b	LTR/Gypsy	30	233	(549)	3506127
20	3.4	3.3	0.0	chr6	134311963	134311992	(36493987)	+	(AAC)n	Simple_repeat	1	31	(0)	3506646
512	25.2	12.4	0.6	chr6	134312077	134312276	(36493703)	+	MIRb	SINE/MIR	10	226	(42)	3506647
1806	14.1	0.4	1.8	chr6	136968586	136968861	(33837118)	C	AluJb	SINE/Alu	(40)	272	1	3510770
2303	9.7	0.7	0.0	chr6	137188638	137188927	(33617052)	C	AluSq2	SINE/Alu	(21)	292	1	3511096
20842	12.4	6.7	4.0	chr6	137188928	137189721	(33616258)	C	MER4B-int	LTR/ERV1	(4429)	2329	1560	3511095
35768	11.5	3.2	2.0	chr6	137371174	137376212	(33429767)	C	MER57A-int	LTR/ERV1	(0)	6187	1089	3511377
2574	8.1	0.0	0.0	chr6	139313064	139313371	(31492608)	C	AluY	SINE/Alu	(3)	308	1	3514450
2170	17.1	7.5	1.0	chr6	139313372	139313464	(31492515)	+	MER34C_	LTR/ERV1	489	584	(1)	3514449
5332	12.9	1.7	1.3	chr6	139313782	139314674	(31491305)	+	MER4D	LTR/ERV1	1	896	(7)	3514451
3433	17.2	1.6	4.4	chr6	139314719	139315429	(31490550)	+	LTR8	LTR/ERV1	1	691	(0)	3514452
25162	10.8	3.4	0.9	chr6	142536876	142540902	(28265077)	+	HERVH48-int	LTR/ERV1	1	4128	(2526)	3518643
378	30.9	2.5	5.6	chr6	142822880	142823164	(27982815)	C	LTR88b	LTR/Gypsy?	(17)	820	545	3519034
4664	21.2	7.4	2.2	chr6	142823209	142824461	(27981518)	+	Zaphod	DNA/hAT-Tip100	18	1340	(2691)	3519035
5384	14.6	0.7	1.4	chr6	143288643	143289552	(27516427)	C	MER4D	LTR/ERV1	(0)	903	1	3519665
12	21.6	0.0	0.0	chr6	146543341	146543372	(24262607)	+	(GGCCCC)n	Simple_repeat	1	32	(0)	3524168
15	20.7	0.0	7.0	chr6	146543641	146543697	(24262282)	+	(CCGGC)n	Simple_repeat	1	57	(0)	3524169
858	28.8	15.3	3.4	chr6	147447536	147448003	(23357976)	+	HAL1b	LINE/L1	202	735	(1686)	3525416
3756	12.5	5.3	0.5	chr6	147448150	147448762	(23357217)	+	LTR9B	LTR/ERV1	1	644	(0)	3525418
2078	15.6	9.2	4.9	chr6	148599895	148600319	(22205660)	C	MER67D	LTR/ERV1	(2)	512	68	3527177
2079	9.3	0.0	7.4	chr6	148600321	148600631	(22205348)	+	AluSc	SINE/Alu	8	295	(14)	3527178
2014	9.6	2.0	8.1	chr6	149546489	149546811	(21259168)	C	AluJb	SINE/Alu	(9)	303	1	3528649
604	27.2	24.9	3.6	chr6	153831450	153832067	(16973912)	+	LTR50	LTR/ERVL	1	794	(1)	3535442
4826	10.7	1.1	0.2	chr6	154343681	154344318	(16461661)	+	LTR9B	LTR/ERV1	1	644	(0)	3536202
2237	11.4	0.3	0.7	chr6	155016617	155016923	(15789056)	+	AluSz	SINE/Alu	1	306	(6)	3537480
564	21.3	14.1	1.6	chr6	155148978	155149191	(15656788)	C	LTR16	LTR/ERVL	(8)	443	199	3537727
296	16.4	5.6	6.9	chr6	155149256	155149327	(15656652)	C	LTR16	LTR/ERVL	(367)	71	1	3537727
15	5.6	0.0	0.0	chr6	156942614	156942632	(13863347)	+	(A)n	Simple_repeat	1	19	(0)	3540225
2190	9.4	3.6	1.0	chr6	157235316	157235614	(13570365)	C	AluSc5	SINE/Alu	(2)	307	1	3540580
1127	5.2	0.0	0.7	chr6	158168816	158168951	(12637028)	+	AluSx	SINE/Alu	1	135	(177)	3542063
2230	9.8	0.0	0.0	chr6	158168952	158169236	(12636743)	+	AluSx1	SINE/Alu	1	285	(27)	3542064
2243	13.6	1.6	5.1	chr6	158464081	158464475	(12341504)	C	MER4D	LTR/ERV1	(1)	902	522	3542577
669	12.6	42.3	0.5	chr6	158464501	158464698	(12341281)	C	AluSx	SINE/Alu	(31)	281	1	3542578
2938	14.3	4.3	7.4	chr6	158464699	158465251	(12340728)	C	MER4D	LTR/ERV1	(368)	535	1	3542577
2714	13.4	3.4	2.0	chr6	158854266	158854723	(11951256)	C	MER4C	LTR/ERV1	(0)	465	1	3543241
263	25.0	18.1	0.0	chr6	158854766	158854869	(11951110)	C	MER5A1	DNA/hAT-Charlie	(33)	133	7	3543242
283	31.0	1.7	0.0	chr6	161243509	161243621	(9562358)	+	MIRb	SINE/MIR	76	190	(78)	3546387
2946	18.5	4.6	8.6	chr6	161291770	161292489	(9513490)	+	LTR8	LTR/ERV1	2	691	(0)	3546466
6929	16.0	7.6	8.7	chr6	161292492	161294387	(9511592)	+	MER41-int	LTR/ERV1	3	1931	(4332)	3546466
4662	9.9	0.0	1.1	chr6	163940862	163941501	(6864478)	+	MER41B	LTR/ERV1	1	633	(1)	3550141
2814	7.3	8.9	0.2	chr6	164344371	164344779	(6461200)	C	LTR7	LTR/ERV1	(2)	448	1	3550659
2470	19.4	4.2	1.1	chr6	168208765	168209295	(2596684)	+	LTR9B	LTR/ERV1	1	548	(96)	3555262
2145	17.1	6.2	2.4	chr6	169006044	169006608	(1799371)	C	MER4B	LTR/ERV1	(7)	774	1	3556048
440	28.1	12.8	0.6	chr6	170497704	170497875	(308104)	+	MIRb	SINE/MIR	51	246	(22)	3557503
2368	14.1	0.0	3.0	chr7	1576840	1577265	(157768708)	C	MER41B	LTR/ERV1	(109)	525	113	3560112
1438	26.1	3.4	1.2	chr7	1577266	1577673	(157768300)	C	L1ME1	LINE/L1	(262)	5917	5501	3560113
1113	4.5	1.5	0.0	chr7	2469265	2469398	(156876575)	+	AluJb	SINE/Alu	1	136	(176)	3561485
893	12.1	0.0	2.9	chr7	2804778	2804917	(156541056)	+	FLAM_C	SINE/Alu	2	137	(6)	3562030
356	20.0	15.2	2.8	chr7	2824791	2824934	(156521039)	+	MER5A1	DNA/hAT-Charlie	1	165	(1)	3562066
527	26.7	7.7	2.0	chr7	2825228	2825422	(156520551)	C	LTR33	LTR/ERVL	(306)	209	3	3562067
238	33.5	6.4	1.0	chr7	2874516	2874545	(156471428)	C	MIRc	SINE/MIR	(43)	225	195	3562188
277	26.5	0.0	0.0	chr7	4973646	4973713	(154372260)	+	L2a	LINE/L2	3359	3426	(0)	3565960
1944	7.4	0.4	0.4	chr7	5408073	5408316	(153937657)	+	AluSc	SINE/Alu	54	297	(12)	3566960
348	32.4	9.8	3.3	chr7	5781978	5782069	(153563904)	C	L2a	LINE/L2	(0)	3426	3333	3567792
2409	7.6	0.0	0.3	chr7	6373948	6374249	(152971724)	C	AluSq2	SINE/Alu	(7)	306	6	3569227
6143	11.9	1.1	1.0	chr7	6901997	6902963	(152443010)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3570363
2145	22.8	5.9	2.9	chr7	7581454	7582031	(151763942)	C	MLT1E1A	LTR/ERVL-MaLR	(62)	618	23	3571281
3970	10.9	4.0	0.3	chr7	10908421	10909061	(148436912)	+	LTR9C	LTR/ERV1	1	666	(0)	3575489
351	15.6	4.9	0.0	chr7	11507784	11507860	(147838113)	+	L1MB1	LINE/L1	5197	5277	(863)	3576271
2050	14.6	2.7	1.9	chr7	11507861	11508230	(147837743)	C	THE1D	LTR/ERVL-MaLR	(0)	381	9	3576272
2202	21.6	5.7	1.9	chr7	12423956	12424592	(146921381)	C	LTR9C	LTR/ERV1	(0)	666	4	3577359
2524	15.8	2.8	1.7	chr7	12648777	12649238	(146696735)	C	LTR24	LTR/ERV1	(0)	467	1	3577639
3234	12.8	3.6	5.2	chr7	12820764	12821402	(146524571)	+	MER4B	LTR/ERV1	1	894	(6)	3577911
2139	11.9	1.4	0.3	chr7	13833363	13833655	(145512318)	C	AluSx3	SINE/Alu	(15)	296	1	3579235
1264	32.4	6.2	1.9	chr7	16484529	16485041	(142860932)	+	LTR16E2	LTR/ERVL	15	550	(18)	3582520
2048	10.2	5.0	0.0	chr7	16565162	16565444	(142780529)	+	AluSq2	SINE/Alu	1	298	(15)	3582647
209	15.7	13.6	0.0	chr7	17298215	17298265	(142047708)	+	L2c	LINE/L2	3098	3156	(231)	3583706
1567	23.8	6.0	3.9	chr7	20019635	20020127	(139325846)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	2	3587178
55733	9.1	1.8	0.8	chr7	21549179	21554170	(137791803)	C	HERVP71A-int	LTR/ERV1	(1121)	6469	1425	3589430
1557	22.2	7.3	7.6	chr7	23596916	23597039	(135748934)	C	L1ME3B	LINE/L1	(1911)	4235	4108	3592684
1500	20.9	10.1	2.2	chr7	24435546	24435948	(134910025)	+	MLT2D	LTR/ERVL	1	541	(14)	3593871
2291	5.3	5.7	0.0	chr7	24726542	24726823	(134619150)	+	AluYf1	SINE/Alu	1	299	(12)	3594293
460	28.9	2.4	11.8	chr7	25025982	25026252	(134319721)	+	MLT1O	LTR/ERVL-MaLR	290	534	(8)	3594770
708	31.8	7.1	7.1	chr7	25026333	25026810	(134319163)	+	L2a	LINE/L2	2937	3414	(12)	3594771
240	29.2	4.2	3.4	chr7	28291878	28291994	(131053979)	C	L2	LINE/L2	(892)	2527	2410	3599838
2795	20.7	3.0	1.5	chr7	28891114	28891726	(130454247)	+	L1M2a	LINE/L1	13	635	(6533)	3600726
253	13.5	20.5	1.1	chr7	28891708	28891797	(130454176)	+	L1MA4	LINE/L1	4633	4744	(1396)	3600727
12	29.4	0.0	2.1	chr7	29189667	29189714	(130156259)	+	(CTCTCC)n	Simple_repeat	1	48	(0)	3601202
57	1.9	0.0	0.0	chr7	30671803	30671857	(128674116)	+	(TGA)n	Simple_repeat	1	55	(0)	3603457
21	21.9	4.0	3.8	chr7	30671858	30671932	(128674041)	+	GA-rich	Low_complexity	1	75	(0)	3603458
187	28.1	3.0	0.0	chr7	30672157	30672220	(128673753)	+	L2c	LINE/L2	3095	3160	(227)	3603459
814	22.2	16.3	1.5	chr7	31115250	31115582	(128230391)	C	Arthur1B	DNA/hAT-Tip100	(0)	1225	834	3604170
373	29.6	4.3	1.2	chr7	31663095	31663259	(127682714)	C	L1MEf	LINE/L1	(5819)	821	569	3605013
573	32.2	7.1	3.1	chr7	31663388	31663711	(127682262)	C	L1MEf	LINE/L1	(5860)	780	443	3605013
1922	19.3	0.7	0.0	chr7	31709871	31710176	(127635797)	+	AluJo	SINE/Alu	3	310	(2)	3605081
293	26.1	11.2	11.5	chr7	32061991	32062285	(127283688)	+	L2c	LINE/L2	2345	2638	(781)	3605592
609	32.7	4.9	8.4	chr7	32062352	32062836	(127283137)	+	L2c	LINE/L2	2921	3387	(0)	3605592
3929	6.8	7.9	1.1	chr7	32603225	32603744	(126742229)	C	LTR6B	LTR/ERV1	(0)	558	1	3606514
1014	19.8	11.4	1.9	chr7	32603745	32603859	(126742114)	C	L1ME3E	LINE/L1	(647)	5596	5463	3606502
5503	15.8	6.5	3.9	chr7	32603860	32604902	(126741071)	C	MER11C	LTR/ERVK	(0)	1071	1	3606515
1367	24.6	5.1	1.6	chr7	32680118	32680554	(126665419)	+	MLT1C	LTR/ERVL-MaLR	10	462	(5)	3606627
2189	10.3	0.3	0.0	chr7	36251299	36251609	(123094364)	C	AluSp	SINE/Alu	(0)	313	1	3611990
433	26.6	15.6	3.0	chr7	37284809	37285109	(122060864)	+	LTR41C	LTR/ERVL	5	335	(433)	3613514
12	19.7	0.0	0.0	chr7	38178317	38178345	(121167628)	+	(CCCCG)n	Simple_repeat	1	29	(0)	3614739
208	33.0	4.9	0.0	chr7	38178407	38178503	(121167470)	C	MIRc	SINE/MIR	(82)	186	85	3614740
3152	15.2	3.1	4.5	chr7	43291687	43292246	(116053727)	C	MER34C_	LTR/ERV1	(32)	553	1	3622419
436	26.9	0.8	1.5	chr7	43292272	43292407	(116053566)	C	MIRb	SINE/MIR	(130)	138	4	3622421
675	29.1	6.9	0.1	chr7	43660470	43660661	(115685312)	C	MIRb	SINE/MIR	(52)	216	7	3622948
11842	11.7	1.2	1.6	chr7	46015232	46018455	(113327518)	+	L1PA8A	LINE/L1	120	3343	(3118)	3626708
26312	23.2	2.4	1.9	chr7	46463467	46469613	(112876360)	C	HUERS-P3-int	LTR/ERV1	(1961)	6958	762	3627272
340	35.5	6.8	6.8	chr7	46534920	46535270	(112810703)	C	L2b	LINE/L2	(2)	3373	3023	3627353
13947	13.4	5.8	3.8	chr7	47552364	47553793	(111792180)	+	Tigger1	DNA/TcMar-Tigger	1	1452	(966)	3628664
2047	8.8	1.4	0.4	chr7	48088061	48088332	(111257641)	C	AluSq2	SINE/Alu	(38)	275	1	3629473
219	28.6	2.0	4.8	chr7	50379448	50379550	(108966423)	+	MIRc	SINE/MIR	99	198	(70)	3632305
293	38.5	0.7	0.0	chr7	51327443	51327585	(108018388)	C	MamGypLTR3a	LTR/Gypsy	(793)	188	45	3633498
3783	9.5	4.7	0.0	chr7	51329529	51330056	(108015917)	C	MER41A	LTR/ERV1	(0)	554	1	3633503
467	22.8	3.3	2.7	chr7	54629701	54629849	(104716124)	+	L1M4a2	LINE/L1	9	158	(2498)	3637564
230	12.0	3.8	2.0	chr7	54630080	54630130	(104715843)	C	L1MD2	LINE/L1	(21)	6338	6287	3637565
607	16.4	4.2	7.0	chr7	54630135	54630305	(104715668)	C	L1MD2	LINE/L1	(802)	5440	5275	3637565
7056	15.1	9.4	7.8	chr7	55298167	55299187	(104046786)	C	MER4-int	LTR/ERV1	(5442)	1156	15	3638412
2720	25.9	6.4	7.8	chr7	55299188	55299203	(104046770)	+	L1M5	LINE/L1	2134	2150	(3996)	3638419
3265	9.3	4.7	0.2	chr7	55299204	55299654	(104046319)	C	MER4A1	LTR/ERV1	(0)	472	1	3638420
6742	11.4	0.7	1.1	chr7	66618958	66619926	(92726047)	C	LTR5_Hs	LTR/ERVK	(3)	965	1	3650419
1698	17.2	0.3	4.1	chr7	66619927	66620002	(92725971)	+	AluJr	SINE/Alu	233	308	(4)	3650418
1693	19.0	2.0	0.7	chr7	70894587	70894886	(88451087)	C	AluJb	SINE/Alu	(8)	304	1	3659030
4748	17.8	2.4	2.1	chr7	71472858	71473747	(87872226)	C	MER4D	LTR/ERV1	(11)	892	1	3660263
1074	18.0	11.3	17.9	chr7	73667274	73667430	(85678543)	C	AluJb	SINE/Alu	(167)	135	1	3665205
252	22.4	4.9	0.0	chr7	73667437	73667494	(85678479)	C	MIR3	SINE/MIR	(39)	169	109	3665207
2088	12.8	1.6	0.0	chr7	73741995	73742292	(85603681)	C	AluSx	SINE/Alu	(9)	303	1	3665356
21	18.3	0.0	0.0	chr7	74174225	74174268	(85171705)	+	(GCGT)n	Simple_repeat	1	44	(0)	3666407
14	12.3	5.4	2.6	chr7	74174287	74174323	(85171650)	+	(GGC)n	Simple_repeat	1	39	(0)	3666408
362	27.1	13.4	3.2	chr7	78578606	78578792	(80767181)	C	Charlie30a	DNA/hAT-Charlie	(395)	396	188	3675648
399	29.9	0.2	0.2	chr7	80682698	80683719	(78662254)	+	(TA)n	Simple_repeat	1	1024	(0)	3678501
7789	13.3	2.5	0.3	chr7	81616745	81618017	(77727956)	C	HSMAR2	DNA/TcMar-Mariner	(1)	1301	1	3679746
1860	19.3	6.5	1.8	chr7	81672992	81673434	(77672539)	+	MSTA1	LTR/ERVL-MaLR	1	465	(0)	3679827
3778	9.7	2.9	0.7	chr7	84913063	84913604	(74432369)	+	MER41A	LTR/ERV1	1	554	(0)	3684141
1928	13.8	9.6	8.9	chr7	92685590	92686073	(66659900)	+	LTR54	LTR/ERV1	9	496	(14)	3694286
4637	10.8	0.5	1.4	chr7	99944122	99944772	(59401201)	C	LTR9D	LTR/ERV1	(0)	645	1	3705539
1049	16.2	16.7	1.2	chr7	100126360	100126512	(59219461)	+	AluJo	SINE/Alu	126	294	(18)	3705907
1668	15.7	0.0	4.7	chr7	100126513	100126811	(59219162)	+	AluJr	SINE/Alu	1	285	(27)	3705910
1867	10.2	6.8	1.5	chr7	100951031	100951294	(58394679)	C	AluSz	SINE/Alu	(33)	279	1	3707712
17	21.1	4.2	4.7	chr7	100951476	100951547	(58394426)	+	G-rich	Low_complexity	1	71	(0)	3707713
1834	11.5	3.5	0.7	chr7	101245461	101245739	(58100234)	+	AluJr	SINE/Alu	2	288	(24)	3708309
2713	20.7	6.9	5.8	chr7	101294039	101294597	(58051376)	C	LTR8A	LTR/ERV1	(150)	577	1	3708440
1622	17.4	1.8	0.4	chr7	101507440	101507709	(57838264)	C	AluJb	SINE/Alu	(30)	282	9	3709004
198	34.2	2.6	0.0	chr7	101507792	101507867	(57838106)	+	L2	LINE/L2	2808	2885	(534)	3709005
708	21.1	2.0	0.7	chr7	101507873	101508020	(57837953)	C	MER91B	DNA/hAT-Tip100	(5)	185	36	3709006
4323	11.3	1.2	1.4	chr7	101575042	101575628	(57770345)	+	LTR9D	LTR/ERV1	57	645	(0)	3709147
287	28.0	4.8	4.8	chr7	101936930	101937053	(57408920)	C	MER5A	DNA/hAT-Charlie	(43)	146	23	3709965
832	14.2	0.0	3.0	chr7	102077411	102077544	(57268429)	+	FLAM_C	SINE/Alu	4	133	(10)	3710257
2019	11.9	0.0	0.3	chr7	105401388	105401673	(53944300)	C	AluSz	SINE/Alu	(0)	312	28	3715736
602	24.1	17.6	10.9	chr7	105401674	105402123	(53943850)	+	LTR50	LTR/ERVL	89	684	(111)	3715735
511	16.2	0.0	0.0	chr7	108182105	108182184	(51163789)	C	FLAM_A	SINE/Alu	(13)	129	50	3720199
367	24.2	1.6	10.1	chr7	108581994	108582131	(50763842)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	485	3720751
447	30.9	3.6	6.0	chr7	108582222	108582421	(50763552)	C	MLT1L	LTR/ERVL-MaLR	(323)	287	93	3720751
1979	10.1	0.0	1.2	chr7	109231418	109231675	(50114298)	C	AluY	SINE/Alu	(55)	256	2	3721559
2608	16.4	4.7	3.4	chr7	109231676	109232087	(50113886)	+	MER67D	LTR/ERV1	105	510	(4)	3721558
1152	23.7	12.5	1.9	chr7	114823229	114823692	(44522281)	C	MLT1H	LTR/ERVL-MaLR	(0)	489	4	3728896
242	25.1	1.6	3.3	chr7	117212939	117213011	(42132962)	+	MIRc	SINE/MIR	11	85	(183)	3732248
2284	20.4	0.9	0.5	chr7	119594889	119595312	(39750661)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3735335
2419	23.7	7.8	7.2	chr7	120926923	120927744	(38418229)	+	MER21C	LTR/ERVL	9	918	(20)	3737002
1338	19.7	6.6	4.9	chr7	121510992	121511453	(37834520)	C	LTR10B2	LTR/ERV1	(0)	547	1	3737792
3495	18.0	2.4	2.9	chr7	121938115	121938829	(37407144)	C	MER67C	LTR/ERV1	(0)	711	1	3738415
20	22.7	0.0	0.0	chr7	123692527	123692577	(35653396)	+	(AGGCGG)n	Simple_repeat	1	51	(0)	3740813
15	16.5	3.2	7.7	chr7	123692602	123692664	(35653309)	+	(AGGTGG)n	Simple_repeat	1	65	(0)	3740814
978	18.1	6.0	5.6	chr7	124810577	124811012	(34534961)	+	LTR54	LTR/ERV1	9	510	(0)	3742341
620	24.1	3.7	4.8	chr7	127504679	127504926	(31841047)	C	L1MEd	LINE/L1	(6258)	845	601	3745833
17	0.0	0.0	0.0	chr7	127505058	127505076	(31840897)	+	(TC)n	Simple_repeat	1	19	(0)	3745837
12	13.7	0.0	0.0	chr7	128783387	128783410	(30562563)	+	(CTG)n	Simple_repeat	1	24	(0)	3747962
653	0.0	0.0	0.0	chr7	128783450	128783521	(30562452)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	3747963
3971	6.5	1.1	0.0	chr7	129170316	129170834	(30175139)	C	MER41A	LTR/ERV1	(29)	525	1	3748639
418	28.2	16.6	9.3	chr7	129646361	129646770	(29699203)	C	LTR33A	LTR/ERVL	(1)	519	74	3749598
191	22.2	2.2	0.0	chr7	129776338	129776382	(29569591)	+	MIR1_Amn	SINE/MIR	90	135	(95)	3749814
225	20.0	2.2	2.2	chr7	129776519	129776564	(29569409)	+	MER5A	DNA/hAT-Charlie	36	81	(108)	3749815
394	27.2	10.7	4.6	chr7	132188758	132188888	(27157085)	+	MIR3	SINE/MIR	60	199	(9)	3754042
1188	27.1	12.9	1.5	chr7	133139437	133139908	(26206065)	+	LTR16E1	LTR/ERVL	1	534	(4)	3755463
422	5.7	6.7	0.0	chr7	134029206	134029275	(25316698)	C	LTR22E	LTR/ERVK	(432)	75	1	3756829
877	19.7	1.5	2.5	chr7	134029279	134029481	(25316492)	+	L1MB8	LINE/L1	5841	6041	(137)	3756830
404	34.8	11.6	3.4	chr7	135753752	135754162	(23591811)	C	L2c	LINE/L2	(0)	3387	2939	3759533
405	31.5	6.6	3.4	chr7	136134483	136134745	(23211228)	C	LTR88b	LTR/Gypsy?	(458)	379	108	3760176
406	18.9	1.8	5.9	chr7	136134974	136135091	(23210882)	+	L1ME4a	LINE/L1	5954	6066	(58)	3760177
593	26.0	11.5	1.9	chr7	138645068	138645326	(20700647)	C	MamRep38	DNA/hAT	(3)	292	6	3763998
54	0.0	2.0	0.0	chr7	142111999	142112048	(17233925)	+	(TG)n	Simple_repeat	1	51	(0)	3770225
17551	14.3	3.3	2.1	chr7	142362968	142366073	(16979900)	C	L1M1	LINE/L1	(3735)	3830	686	3770553
378	35.1	11.3	3.5	chr7	143370222	143370360	(15975613)	+	L2b	LINE/L2	1858	2005	(1414)	3771820
3628	10.4	2.7	1.1	chr7	143370361	143370905	(15975068)	+	MER41A	LTR/ERV1	1	554	(0)	3771821
606	30.1	7.1	5.7	chr7	143906719	143907049	(15438924)	+	MER102b	DNA/hAT-Charlie	2	337	(4)	3772475
272	35.5	9.9	2.7	chr7	143907271	143907568	(15438405)	C	HAL1b	LINE/L1	(1973)	448	127	3772476
1982	14.0	1.4	0.0	chr7	146411800	146412132	(12933841)	C	AluSz	SINE/Alu	(0)	312	1	3775877
4602	10.4	1.9	1.7	chr7	148501541	148502111	(10843862)	C	LTR9B	LTR/ERV1	(0)	644	72	3778890
613	4.2	0.0	0.0	chr7	149415138	149415209	(9930764)	C	tRNA-Cys-TGY	tRNA	(3)	72	1	3780660
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
2256	12.3	0.7	0.0	chr7	155027132	155027439	(4318534)	C	AluSz6	SINE/Alu	(2)	310	1	3789058
1578	26.5	4.6	3.4	chr7	156585027	156585580	(2760393)	+	L1MCa	LINE/L1	3	563	(5482)	3791087
1900	20.9	6.0	1.5	chr7	156585569	156586166	(2759807)	+	L1MCa	LINE/L1	2042	2655	(3990)	3791087
322	13.7	0.0	0.0	chr7	156949057	156949107	(2396866)	C	MLT1C	LTR/ERVL-MaLR	(364)	103	53	3791612
2135	6.2	2.9	1.1	chr7	156949219	156949490	(2396483)	C	AluSx	SINE/Alu	(35)	277	1	3791613
993	19.0	9.5	1.4	chr7	157310655	157311042	(2034931)	C	LTR54	LTR/ERV1	(5)	505	19	3792253
453	18.5	0.0	16.9	chr7	157311043	157311086	(2034887)	+	LTR62	LTR/ERVL	1	36	(673)	3792254
2060	12.6	1.7	0.0	chr7	157311087	157311371	(2034602)	+	AluSz	SINE/Alu	9	298	(14)	3792255
2017	14.2	0.0	1.0	chr7	157320126	157320428	(2025545)	C	AluSz6	SINE/Alu	(12)	300	1	3792278
2791	24.9	5.8	1.6	chr8	1132559	1133308	(144005328)	C	LTR39	LTR/ERV1	(0)	783	1	3795476
4270	12.6	4.0	0.3	chr8	5165126	5165777	(139972859)	C	LTR8	LTR/ERV1	(14)	677	1	3800291
1898	17.2	2.1	7.0	chr8	5165946	5166470	(139972166)	C	MER4CL34	LTR/ERV1	(1)	764	1	3800292
2870	9.9	10.2	4.1	chr8	8616916	8617296	(136521340)	+	MER4B	LTR/ERV1	221	891	(9)	3805025
1568	16.7	5.7	1.5	chr8	8884683	8884952	(136253684)	+	AluJb	SINE/Alu	1	282	(30)	3805512
303	29.6	4.2	0.0	chr8	10344130	10344244	(134794392)	+	MIRb	SINE/MIR	25	144	(124)	3807919
11	9.6	8.6	2.6	chr8	13276803	13276837	(131861799)	+	(GCAGGTG)n	Simple_repeat	1	38	(0)	3812420
1750	16.4	4.0	0.3	chr8	13277042	13277334	(131861302)	+	AluJr	SINE/Alu	1	304	(8)	3812421
146	17.2	3.5	2.5	chr8	14860403	14860750	(130277886)	+	GA-rich	Low_complexity	1	360	(0)	3814572
918	34.0	5.8	3.2	chr8	16477625	16478025	(128660611)	C	L1M3c	LINE/L1	(5691)	450	39	3816811
2260	9.3	0.3	6.1	chr8	17374205	17374340	(127764296)	+	AluSx1	SINE/Alu	1	135	(177)	3818095
2458	10.4	0.0	0.0	chr8	17374341	17374649	(127763987)	+	AluSc	SINE/Alu	1	309	(0)	3818096
16	18.2	2.1	4.2	chr8	18387208	18387279	(126751357)	+	(CCG)n	Simple_repeat	1	70	(0)	3819563
882	5.5	7.9	0.8	chr8	18986916	18987044	(126151592)	+	MER85	DNA/PiggyBac	1	139	(0)	3820459
4179	23.8	10.6	5.7	chr8	19861946	19863156	(125275480)	+	MSTD-int	LTR/ERVL-MaLR	459	1735	(0)	3821899
461	33.2	7.0	5.5	chr8	20458158	20458450	(124680186)	+	L2c	LINE/L2	3087	3384	(3)	3822893
13	14.1	10.3	3.1	chr8	21041282	21041339	(124097297)	+	(GCAGCG)n	Simple_repeat	1	64	(0)	3823813
12	19.7	0.0	0.0	chr8	21456392	21456420	(123682216)	+	G-rich	Low_complexity	1	29	(0)	3824442
289	31.4	5.0	7.4	chr8	23979344	23979546	(121159090)	+	AmnSINE1	SINE/5S-Deu-L2	378	575	(0)	3828822
2542	6.8	0.0	1.0	chr8	26290862	26291171	(118847465)	C	AluSg	SINE/Alu	(3)	307	1	3832498
2266	11.9	0.0	0.3	chr8	26636730	26637041	(118501595)	C	AluSx1	SINE/Alu	(1)	311	1	3833086
16	28.6	1.7	0.0	chr8	28890493	28890551	(116248085)	+	(CCTCCC)n	Simple_repeat	1	60	(0)	3837025
196	32.0	5.2	12.3	chr8	29176951	29177048	(115961588)	+	MamSINE1	SINE/tRNA-RTE	10	105	(185)	3837466
825	20.1	2.3	8.6	chr8	29177049	29177282	(115961354)	+	MER20	DNA/hAT-Charlie	1	219	(0)	3837467
196	32.0	5.2	12.3	chr8	29177283	29177329	(115961307)	+	MamSINE1	SINE/tRNA-RTE	106	144	(146)	3837466
2900	19.1	7.4	1.8	chr8	30034288	30034889	(115103747)	C	LTR9B	LTR/ERV1	(0)	644	7	3838908
2253	10.8	1.6	0.3	chr8	30393514	30393818	(114744818)	C	AluSx	SINE/Alu	(3)	309	1	3839693
2014	12.1	1.0	2.2	chr8	33473442	33473754	(111664882)	+	AluJo	SINE/Alu	1	309	(3)	3844559
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
1777	35.6	8.3	2.5	chr8	34846066	34847255	(110291381)	+	L2b	LINE/L2	1870	3145	(230)	3846711
2155	9.0	2.9	2.9	chr8	38522403	38522713	(106615923)	+	AluSx3	SINE/Alu	1	311	(0)	3852454
205	21.9	2.4	0.0	chr8	38531623	38531663	(106606973)	C	L2c	LINE/L2	(31)	3356	3315	3852472
2315	10.4	1.3	0.7	chr8	38531680	38531988	(106606648)	+	AluSx1	SINE/Alu	1	311	(1)	3852473
21	16.2	0.0	4.4	chr8	38996919	38996963	(106141673)	+	(CG)n	Simple_repeat	1	45	(0)	3853349
24	24.9	1.2	3.7	chr8	40238090	40238102	(104900534)	+	(TTCC)n	Simple_repeat	1	37	(44)	3855053
18	19.5	0.0	5.6	chr8	40238103	40238156	(104900480)	+	(CTCCCTC)n	Simple_repeat	1	54	(0)	3855054
24	24.9	1.2	3.7	chr8	40238157	40238169	(104900467)	+	(TTCC)n	Simple_repeat	38	81	(0)	3855053
290	26.0	15.9	6.6	chr8	40238284	40238419	(104900217)	C	HAL1	LINE/L1	(699)	1808	1658	3855049
34	26.1	0.0	1.1	chr8	40238434	40238524	(104900112)	+	(CTCC)n	Simple_repeat	1	91	(0)	3855055
12	17.1	4.9	2.3	chr8	41895979	41896019	(103242617)	+	(CGCAGCC)n	Simple_repeat	1	43	(0)	3857794
4141	14.4	23.4	1.8	chr8	47765223	47766183	(97372453)	+	MER11B	LTR/ERVK	1	1232	(4)	3862368
451	18.9	8.6	3.8	chr8	48261210	48261341	(96877295)	C	L2a	LINE/L2	(0)	3426	3288	3863145
369	31.2	1.8	0.0	chr8	51370073	51370184	(93768452)	+	MIRb	SINE/MIR	86	199	(69)	3866704
24371	5.8	0.2	0.0	chr8	53695163	53700952	(91437684)	C	L1PA3	LINE/L1	(1)	6154	353	3869812
1121	11.4	3.7	0.0	chr8	53700950	53701133	(91437503)	C	L1PA3	LINE/L1	(5963)	192	2	3869812
363	25.2	3.0	1.9	chr8	55930860	55930966	(89207670)	C	AluJb	SINE/Alu	(217)	85	2	3873220
3952	24.1	5.7	4.4	chr8	56292087	56293562	(88845074)	C	L1MCb	LINE/L1	(5172)	1579	3	3873770
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
5805	11.3	13.8	1.5	chr8	57597202	57598283	(87540353)	+	MER11B	LTR/ERVK	1	1236	(0)	3875530
7680	17.7	7.1	2.1	chr8	59078679	59079975	(86058661)	+	MSTA-int	LTR/ERVL-MaLR	1	1392	(259)	3877455
15416	23.4	4.0	3.1	chr8	61822897	61824218	(83314418)	C	ERVL-B4-int	LTR/ERVL	(4278)	1436	5	3881167
697	30.3	8.3	4.3	chr8	63742400	63742858	(81395778)	C	L2a	LINE/L2	(83)	3343	2874	3883634
870	31.3	3.1	3.5	chr8	65795092	65795542	(79343094)	+	L1ME2	LINE/L1	61	509	(5891)	3886415
41249	10.2	3.5	0.7	chr8	65863622	65870079	(79268557)	+	HERVH48-int	LTR/ERV1	1	6647	(7)	3886535
563	0.0	0.0	18.0	chr8	66113988	66114076	(79024560)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3886878
588	6.8	0.0	0.0	chr8	66114189	66114261	(79024375)	+	tRNA-Ala-GCY	tRNA	1	73	(3)	3886879
290	29.4	16.2	7.6	chr8	67955410	67955748	(77182888)	+	L2c	LINE/L2	2994	3387	(0)	3890064
1674	26.4	6.7	1.5	chr8	68970398	68970936	(76167700)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	3891384
272	30.1	7.4	7.8	chr8	68970937	68971120	(76167516)	+	LTR85a	LTR/Gypsy?	57	229	(473)	3891383
12086	14.3	1.0	0.9	chr8	70804981	70808319	(74330317)	+	L1PA10	LINE/L1	4	3355	(3106)	3894380
226	35.2	5.2	2.1	chr8	71715472	71715564	(73423072)	+	MIRb	SINE/MIR	34	129	(139)	3895576
521	25.9	23.8	0.0	chr8	71715556	71715783	(73422853)	+	L2a	LINE/L2	3128	3426	(0)	3895577
1962	16.1	13.2	2.9	chr8	73001833	73002353	(72136283)	+	LTR49	LTR/ERV1	1	619	(3)	3897229
776	22.6	2.3	5.8	chr8	74629509	74629733	(70508903)	C	LTR16A1	LTR/ERVL	(231)	225	9	3899906
6401	9.0	17.2	0.7	chr8	74647676	74648730	(70489906)	+	MER11A	LTR/ERVK	1	1266	(0)	3899927
5992	11.4	2.6	2.5	chr8	78438767	78439733	(66698903)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3904697
1920	19.5	11.8	8.8	chr8	80211508	80212098	(64926538)	C	LTR36	LTR/ERV1	(0)	611	1	3907239
526	15.2	12.5	0.0	chr8	80230143	80230254	(64908382)	+	MIR	SINE/MIR	74	201	(61)	3907290
498	16.9	17.6	0.7	chr8	80230265	80230401	(64908235)	C	MER5A1	DNA/hAT-Charlie	(1)	165	1	3907291
275	21.1	1.7	0.0	chr8	80230403	80230459	(64908177)	+	MIR	SINE/MIR	201	258	(4)	3907290
1892	22.0	6.1	2.1	chr8	83063931	83064353	(62074283)	+	HERV4_I-int	LTR/ERV1	60	500	(6039)	3911427
5312	9.1	1.4	0.3	chr8	87012276	87013032	(58125604)	+	MER4E	LTR/ERV1	1	766	(0)	3916898
1241	15.0	1.5	0.0	chr8	87013047	87013239	(58125397)	+	MER4B-int	LTR/ERV1	7	202	(6556)	3916898
181	23.8	3.1	7.3	chr8	87013243	87013310	(58125326)	C	Penelope1_Vert	LINE/Penelope	(623)	464	400	3916899
1447	4.4	1.1	0.0	chr8	88365998	88366179	(56772457)	C	L1PA6	LINE/L1	(4)	6150	5967	3918531
2394	17.6	0.8	6.8	chr8	88366180	88366588	(56772048)	C	MER67D	LTR/ERV1	(132)	382	1	3918530
27353	2.7	0.1	0.2	chr8	89535241	89541269	(55597367)	+	L1PA2	LINE/L1	135	6154	(1)	3919944
22909	10.1	2.0	0.9	chr8	89736822	89741421	(55397215)	+	L1PB1	LINE/L1	920	5610	(1252)	3920187
232	25.0	6.8	0.0	chr8	91680956	91681023	(53457613)	+	MER5B	DNA/hAT-Charlie	32	104	(74)	3922838
606	21.1	13.9	3.6	chr8	91681089	91681255	(53457381)	C	MER5A	DNA/hAT-Charlie	(2)	187	1	3922839
4362	13.3	0.8	0.2	chr8	93873619	93874248	(51264388)	C	MER41B	LTR/ERV1	(0)	634	1	3925971
3659	15.7	6.1	4.2	chr8	93874249	93874676	(51263960)	C	LTR8A	LTR/ERV1	(2)	725	316	3925972
249	34.7	4.6	4.0	chr8	95682076	95682225	(49456411)	C	LTR104_Mam	LTR/Gypsy	(345)	1164	1014	3929129
1408	21.3	8.1	0.9	chr8	95894655	95895093	(49243543)	C	MLT2F	LTR/ERVL	(141)	522	1	3929440
1100	25.7	3.6	7.8	chr8	98840688	98841278	(46297358)	C	MLT1F2	LTR/ERVL-MaLR	(0)	569	26	3934267
2254	10.1	0.0	1.6	chr8	100143756	100144071	(44994565)	C	AluSx1	SINE/Alu	(0)	312	2	3936231
648	25.6	7.5	2.8	chr8	100667499	100667815	(44470821)	C	Charlie20a	DNA/hAT-Charlie	(257)	550	218	3937217
21	21.2	3.3	6.3	chr8	100722185	100722276	(44416360)	+	GA-rich	Low_complexity	1	95	(0)	3937327
13	28.1	1.7	3.3	chr8	100722203	100722314	(44416322)	+	G-rich	Low_complexity	1	110	(0)	3937328
866	27.8	6.4	3.8	chr8	100994300	100994646	(44143990)	C	L4_A_Mam	LINE/RTE-X	(5)	4985	4629	3937936
2336	8.9	0.0	0.0	chr8	101003255	101003546	(44135090)	+	AluSc	SINE/Alu	1	292	(17)	3937957
1451	23.0	13.8	2.4	chr8	102435748	102436380	(42702256)	+	L1MEd	LINE/L1	1295	2006	(5097)	3940335
257	25.9	7.5	6.2	chr8	102782551	102782694	(42355942)	C	MER5B	DNA/hAT-Charlie	(28)	150	5	3941099
2363	9.1	0.0	0.0	chr8	102905830	102906125	(42232511)	C	AluSc	SINE/Alu	(13)	296	1	3941342
1054	23.3	13.8	3.6	chr8	102906177	102906533	(42232103)	C	MLT1J	LTR/ERVL-MaLR	(50)	462	64	3941343
1618	19.5	10.0	1.5	chr8	103111094	103111488	(42027148)	+	MLT1C	LTR/ERVL-MaLR	2	433	(34)	3941766
1803	20.9	8.5	0.5	chr8	103624099	103624530	(41514106)	+	MLT2B1	LTR/ERVL	1	470	(50)	3942575
11016	18.8	2.6	4.0	chr8	103646732	103651402	(41487234)	C	L1PA10	LINE/L1	(1892)	6249	9	3942601
3930	12.2	5.4	0.0	chr8	104028791	104029390	(41109246)	C	MER41B	LTR/ERV1	(0)	634	1	3943083
377	26.5	6.5	15.2	chr8	104342366	104342654	(40795982)	+	MER102c	DNA/hAT-Charlie	56	317	(14)	3943545
20	28.3	3.6	1.2	chr8	106270272	106270354	(38868282)	+	(CGC)n	Simple_repeat	1	86	(0)	3946268
13	27.0	3.8	0.0	chr8	106270443	106270495	(38868141)	+	(GCGCCTG)n	Simple_repeat	1	55	(0)	3946269
5929	13.3	13.7	1.5	chr8	108941942	108943021	(36195615)	+	MER11B	LTR/ERVK	1	1233	(3)	3950114
5858	11.4	14.6	2.0	chr8	110798248	110799325	(34339311)	C	MER11B	LTR/ERVK	(0)	1236	1	3952697
3995	14.4	1.6	1.5	chr8	110835304	110835968	(34302668)	C	LTR9C	LTR/ERV1	(0)	666	1	3952744
2013	20.1	13.0	0.2	chr8	111916386	111916814	(33221822)	C	MSTD-int	LTR/ERVL-MaLR	(13)	1722	1231	3954126
2452	14.6	9.7	1.7	chr8	111916820	111917300	(33221336)	+	LTR22B1	LTR/ERVK	3	526	(0)	3954127
3632	30.9	2.2	5.6	chr8	111917301	111918582	(33220054)	C	MSTD-int	LTR/ERVL-MaLR	(499)	1236	1	3954126
6747	10.5	0.3	0.9	chr8	112772174	112773142	(32365494)	+	LTR5_Hs	LTR/ERVK	1	963	(5)	3955274
2367	20.7	3.1	1.4	chr8	116300503	116301007	(28837629)	+	MER74A	LTR/ERVL	1	514	(44)	3959842
4307	13.1	0.6	0.6	chr8	117930669	117931297	(27207339)	+	MER41B	LTR/ERV1	1	629	(5)	3962385
261	26.6	0.6	0.6	chr8	117959548	117959633	(27179003)	C	MIR3	SINE/MIR	(22)	186	104	3962439
2185	11.1	0.3	1.0	chr8	119867558	119867837	(25270799)	C	AluSx	SINE/Alu	(30)	282	2	3965532
449	25.5	11.5	2.5	chr8	120957035	120957231	(24181405)	+	LTR78B	LTR/ERV1	991	1207	(89)	3967452
680	2.7	0.0	0.0	chr8	123157229	123157302	(21981334)	C	tRNA-Met_	tRNA	(2)	74	1	3971276
4680	7.2	0.2	0.0	chr8	124450022	124450574	(20688062)	C	MER41A	LTR/ERV1	(0)	554	1	3973736
303	35.4	5.3	0.0	chr8	124539424	124539621	(20599015)	+	MIRb	SINE/MIR	48	256	(12)	3973889
12	20.1	6.5	4.5	chr8	127736250	127736311	(17402325)	+	(AGCG)n	Simple_repeat	1	66	(0)	3979958
339	30.3	14.7	1.6	chr8	128314449	128314696	(16823940)	C	L1MC5a	LINE/L1	(2070)	707	422	3981242
202	31.7	1.2	5.5	chr8	128314783	128314908	(16823728)	+	L2b	LINE/L2	3062	3181	(194)	3981243
713	22.9	2.1	2.1	chr8	128314931	128315117	(16823519)	C	MER5A	DNA/hAT-Charlie	(2)	187	1	3981244
481	34.3	5.3	3.1	chr8	128315134	128315356	(16823280)	+	L2b	LINE/L2	3148	3375	(0)	3981243
2600	16.8	6.4	1.9	chr8	129514950	129515489	(15623147)	+	LTR49	LTR/ERV1	1	566	(29)	3983293
769	33.2	5.8	3.1	chr8	129515503	129515557	(15623079)	+	MLT1I	LTR/ERVL-MaLR	51	106	(305)	3983294
1564	22.1	2.8	6.4	chr8	129515558	129516040	(15622596)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	1	3983295
277	26.8	6.0	2.2	chr8	130749522	130749625	(14389011)	+	MIR	SINE/MIR	42	149	(113)	3985695
394	23.3	0.0	0.0	chr8	130749661	130749746	(14388890)	+	L2a	LINE/L2	3303	3388	(38)	3985696
2122	11.9	5.0	1.6	chr8	130750076	130750443	(14388193)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3985697
2050	9.9	17.3	1.3	chr8	131308262	131308638	(13829998)	+	LTR7	LTR/ERV1	1	450	(0)	3986645
3353	19.7	9.5	6.0	chr8	131308639	131308830	(13829806)	C	L1MCa	LINE/L1	(5063)	1688	1527	3986643
2580	7.7	12.9	0.0	chr8	131310175	131310564	(13828072)	+	LTR7	LTR/ERV1	1	448	(2)	3986646
20874	9.3	5.4	1.9	chr8	131310567	131313738	(13824898)	+	HERVH-int	LTR/ERV1	1	3290	(4423)	3986646
669	29.4	7.5	2.0	chr8	134710213	134710554	(10428082)	+	MER65D	LTR/ERV1	17	423	(50)	3992723
383	23.7	2.2	7.1	chr8	134925977	134926117	(10212519)	C	MER126	DNA	(88)	361	228	3993145
488	28.3	2.9	4.0	chr9	764332	764504	(137630213)	+	MIRb	SINE/MIR	9	179	(89)	4009687
1964	15.0	0.0	0.0	chr9	2923524	2923816	(135470901)	+	AluSx1	SINE/Alu	14	306	(6)	4012859
13	12.1	0.0	3.5	chr9	2923908	2923936	(135470781)	+	(CTGTG)n	Simple_repeat	1	29	(0)	4012860
3892	14.8	0.8	0.6	chr9	3088007	3088650	(135306067)	+	LTR9D	LTR/ERV1	1	645	(0)	4013128
282	19.4	1.5	0.0	chr9	4297325	4297391	(134097326)	+	MIR3	SINE/MIR	67	134	(74)	4014803
1983	8.7	20.0	12.5	chr9	6692906	6693066	(131701651)	C	PRIMA4-int	LTR/ERV1	(7770)	500	307	4018519
182	26.2	2.3	0.0	chr9	6693067	6693108	(131701609)	C	OldhAT1	DNA/hAT-Ac	(658)	2190	2148	4018523
1983	8.7	20.0	12.5	chr9	6693109	6693338	(131701379)	C	PRIMA4-int	LTR/ERV1	(7770)	306	27	4018519
1185	20.4	9.0	2.5	chr9	6693342	6693364	(131701353)	+	MLT1A1	LTR/ERVL-MaLR	108	129	(279)	4018524
3488	8.2	13.3	5.3	chr9	6693365	6693686	(131701031)	C	PRIMA4_LTR	LTR/ERV1	(0)	594	198	4018525
3589	10.8	2.3	0.0	chr9	8825585	8826094	(129568623)	C	MER41A	LTR/ERV1	(32)	522	1	4021624
2140	19.5	2.9	3.7	chr9	9997607	9998065	(128396652)	+	LTR9B	LTR/ERV1	7	461	(183)	4023136
590	25.6	0.6	0.6	chr9	14515679	14515843	(123878874)	C	MER5A1	DNA/hAT-Charlie	(0)	166	2	4029107
8171	17.3	6.4	1.8	chr9	14546489	14548063	(123846654)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1	4029147
206	26.9	1.9	0.0	chr9	16266866	16266917	(122127800)	+	L2a	LINE/L2	3373	3425	(1)	4031694
236	36.0	1.1	0.0	chr9	16267021	16267106	(122127611)	+	L2a	LINE/L2	3338	3424	(2)	4031697
679	27.8	11.3	2.8	chr9	16519648	16519865	(121874852)	C	MIRb	SINE/MIR	(8)	260	22	4032041
282	28.2	11.3	4.3	chr9	16768665	16768779	(121625938)	C	L2c	LINE/L2	(38)	3349	3226	4032340
1616	16.0	12.9	3.4	chr9	18379128	18379574	(120015143)	+	LTR54B	LTR/ERV1	1	496	(2)	4034589
2181	8.1	0.0	6.2	chr9	19380563	19380869	(119013848)	+	AluSx1	SINE/Alu	1	288	(24)	4036215
1342	26.9	7.2	3.5	chr9	20111056	20111548	(118283169)	+	LTR33	LTR/ERVL	3	515	(0)	4037406
780	19.6	0.7	0.0	chr9	20111572	20111714	(118283003)	+	MER5A1	DNA/hAT-Charlie	23	166	(0)	4037407
506	27.3	12.4	1.9	chr9	21812819	21813027	(116581690)	+	MIR	SINE/MIR	4	237	(25)	4039746
405	3.9	0.0	0.0	chr9	23907449	23907499	(114487218)	+	MADE1	DNA/TcMar-Mariner	1	51	(29)	4042428
354	33.1	5.4	4.9	chr9	23907531	23907714	(114487003)	C	LTR103_Mam	LTR/ERV1?	(285)	190	6	4042429
5460	12.3	16.7	1.7	chr9	24773926	24774998	(113619719)	C	MER11A	LTR/ERVK	(0)	1266	1	4043505
1512	22.1	5.1	1.9	chr9	26604096	26604455	(111790262)	+	MLT2B4	LTR/ERVL	1	372	(184)	4045873
501	29.6	7.0	2.3	chr9	26604496	26604671	(111790046)	+	LTR88c	LTR/Gypsy?	116	300	(562)	4045874
874	25.1	6.4	1.3	chr9	27308811	27309048	(111085669)	C	MER76	LTR/ERVL	(414)	277	27	4046951
1647	31.9	10.2	7.2	chr9	28969068	28970284	(109424433)	C	L2a	LINE/L2	(86)	3340	2090	4049313
17682	16.6	4.8	2.1	chr9	28970323	28972623	(109422094)	+	L1M1	LINE/L1	22	2434	(5131)	4049314
6059	21.1	2.6	2.5	chr9	31799552	31801460	(106593257)	+	L1MA4	LINE/L1	1254	3154	(4411)	4052876
2173	9.2	0.0	8.0	chr9	38707487	38707812	(99686905)	+	AluSc8	SINE/Alu	1	300	(11)	4065040
232	25.2	15.6	0.7	chr9	68947119	68947254	(69447463)	C	LTR33A	LTR/ERVL	(7)	513	354	4080679
1527	22.7	7.0	9.1	chr9	69088735	69089262	(69305455)	C	MER41C	LTR/ERV1	(5)	516	1	4080962
2521	7.2	8.5	2.0	chr9	69089323	69089674	(69305043)	+	MER51B	LTR/ERV1	1	377	(0)	4080963
211	35.4	5.9	2.3	chr9	69542962	69543091	(68851626)	C	MIR1_Amn	SINE/MIR	(94)	136	2	4081742
2359	7.2	0.7	1.3	chr9	70417918	70418223	(67976494)	C	AluSx	SINE/Alu	(8)	304	1	4083110
186	24.4	0.0	0.0	chr9	70418275	70418315	(67976402)	C	MER5A	DNA/hAT-Charlie	(52)	137	97	4083111
2348	9.2	0.3	0.7	chr9	70629324	70629628	(67765089)	C	AluSq2	SINE/Alu	(1)	312	9	4083502
1603	28.9	5.2	1.5	chr9	71333308	71333788	(67060929)	+	MLT1F2	LTR/ERVL-MaLR	13	512	(48)	4084514
328	20.0	2.4	5.9	chr9	71333817	71333901	(67060816)	C	MER102b	DNA/hAT-Charlie	(173)	168	87	4084513
5524	10.8	1.8	4.2	chr9	71920843	71921736	(66472981)	+	MER4D0	LTR/ERV1	1	872	(0)	4085517
438	22.1	3.4	3.4	chr9	74281675	74281791	(64112926)	C	MIRc	SINE/MIR	(114)	154	38	4089169
6353	14.0	1.7	5.7	chr9	77128201	77128876	(61265841)	C	MSTA-int	LTR/ERVL-MaLR	(518)	1133	476	4093793
439	27.6	2.2	2.2	chr9	77575745	77575881	(60818836)	C	MER5B	DNA/hAT-Charlie	(36)	142	6	4094482
4611	7.8	0.5	0.0	chr9	77584605	77585155	(60809562)	C	MER41A	LTR/ERV1	(0)	554	1	4094493
2448	9.1	2.8	0.5	chr9	77585190	77585545	(60809172)	+	MER34C_	LTR/ERV1	2	366	(219)	4094494
2299	16.5	1.7	2.4	chr9	79834524	79834938	(58559779)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	21	4097819
328	25.9	11.2	1.4	chr9	81522850	81522993	(56871724)	+	MLT1K	LTR/ERVL-MaLR	104	244	(366)	4100031
366	29.6	4.0	3.4	chr9	81523249	81523395	(56871322)	C	L3	LINE/CR1	(1080)	3019	2872	4100032
14239	8.2	0.1	0.6	chr9	84535108	84536333	(53858384)	C	L1PA5	LINE/L1	(4669)	1486	258	4104871
2693	21.4	0.9	0.9	chr9	84862587	84863142	(53531575)	C	MER74A	LTR/ERVL	(2)	556	1	4105374
331	36.9	2.0	2.5	chr9	85424915	85425081	(52969636)	C	MER5A	DNA/hAT-Charlie	(4)	185	8	4106192
3231	13.1	0.6	3.3	chr9	86186711	86187249	(52207468)	+	L1PBa	LINE/L1	636	1159	(5704)	4107463
9590	10.2	2.5	0.8	chr9	86187243	86188291	(52206426)	+	L1PBa	LINE/L1	1297	2361	(4502)	4107463
20	14.3	2.0	3.9	chr9	86354546	86354595	(52040122)	+	(CGCCC)n	Simple_repeat	1	51	(0)	4107753
2297	8.9	0.0	0.3	chr9	87409981	87410273	(50984444)	C	AluSq2	SINE/Alu	(11)	302	11	4109434
560	29.2	13.0	2.2	chr9	87410274	87410379	(50984338)	C	L1M5	LINE/L1	(657)	5467	5360	4109433
296	16.4	1.6	0.0	chr9	89679071	89679131	(48715586)	+	L1MC4	LINE/L1	7460	7521	(521)	4112804
3247	20.6	2.7	3.6	chr9	90778534	90779111	(47615606)	C	MER21C	LTR/ERVL	(276)	662	1	4114282
313	21.2	0.0	0.0	chr9	90779130	90779195	(47615522)	+	L1ME3A	LINE/L1	5841	5906	(267)	4114281
401	13.2	9.8	3.5	chr9	92097938	92098023	(46296694)	C	Charlie5	DNA/hAT-Charlie	(511)	2113	2022	4116192
3631	4.1	3.6	0.0	chr9	92098027	92098485	(46296232)	+	HERV-Fc1_LTR3	LTR/ERV1	1	476	(0)	4116193
5567	19.0	7.4	4.4	chr9	92878313	92879795	(45514922)	+	L1MD	LINE/L1	2608	4139	(2007)	4117356
5069	25.0	4.3	5.6	chr9	92983638	92985415	(45409302)	C	MER50-int	LTR/ERV1	(2664)	4541	2788	4117519
2432	9.1	0.3	0.0	chr9	92989041	92989348	(45405369)	C	AluSc8	SINE/Alu	(2)	309	1	4117524
514	12.0	0.0	0.0	chr9	92989351	92989425	(45405292)	C	Alu	SINE/Alu	(236)	75	1	4117525
895	18.6	3.4	7.3	chr9	92989426	92989450	(45405267)	C	L1MA5A	LINE/L1	(1669)	5893	5873	4117514
3253	9.7	2.1	0.7	chr9	92989451	92989908	(45404809)	C	MER4C	LTR/ERV1	(0)	465	1	4117526
458	8.4	11.2	0.0	chr9	93594829	93594899	(44799818)	+	MADE1	DNA/TcMar-Mariner	1	80	(0)	4118352
745	13.7	0.8	2.3	chr9	94165547	94165677	(44229040)	+	AluJb	SINE/Alu	176	304	(8)	4119124
244	21.3	1.3	0.5	chr9	94165714	94165828	(44228889)	C	MIR	SINE/MIR	(98)	170	57	4119125
336	26.2	21.5	0.5	chr9	94212636	94212819	(44181898)	+	MIRb	SINE/MIR	1	233	(35)	4119209
2425	6.2	0.7	0.0	chr9	97237799	97238071	(41156646)	C	AluSg4	SINE/Alu	(35)	275	1	4124187
296	20.1	2.7	1.5	chr9	97388574	97388680	(41006037)	C	MIR3	SINE/MIR	(86)	182	79	4124446
2563	6.2	0.0	0.3	chr9	98218285	98218593	(40176124)	+	AluY	SINE/Alu	1	308	(3)	4126095
986	18.1	0.0	0.0	chr9	98218693	98218847	(40175870)	C	AluSx3	SINE/Alu	(14)	297	143	4126096
2028	14.3	1.0	1.3	chr9	99744861	99745167	(38649550)	C	AluJb	SINE/Alu	(6)	306	1	4129008
735	27.3	3.3	2.6	chr9	99745168	99745277	(38649440)	C	MIR	SINE/MIR	(119)	143	32	4129007
289	28.0	3.3	5.6	chr9	99745366	99745490	(38649227)	C	MIRb	SINE/MIR	(30)	238	117	4129009
707	29.0	1.6	2.9	chr9	104885873	104886117	(33508600)	+	MIRb	SINE/MIR	13	254	(14)	4136419
1321	21.0	5.7	1.9	chr9	104992996	104993315	(33401402)	C	MLT1A	LTR/ERVL-MaLR	(41)	333	1	4136646
374	32.9	3.3	4.6	chr9	105911938	105912090	(32482627)	C	L3	LINE/CR1	(12)	4087	3937	4138206
308	28.3	8.2	4.2	chr9	107422592	107422757	(30971960)	C	MIR3	SINE/MIR	(35)	195	19	4140664
591	29.6	6.9	5.4	chr9	110826146	110826250	(27568467)	+	L2a	LINE/L2	3107	3219	(207)	4146860
6150	12.4	1.2	1.2	chr9	110826251	110827218	(27567499)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	4146861
1873	13.3	0.4	0.0	chr9	116285159	116285422	(22109295)	C	AluSc	SINE/Alu	(0)	309	45	4157084
361	31.4	10.7	4.9	chr9	116285494	116285818	(22108899)	+	L2c	LINE/L2	3041	3386	(1)	4157082
437	27.1	6.1	3.4	chr9	119195383	119195558	(19199159)	+	MIRc	SINE/MIR	79	259	(9)	4162507
205	12.7	6.8	6.8	chr9	119964242	119964300	(18430417)	+	MIRc	SINE/MIR	69	127	(141)	4164058
1950	19.7	5.6	3.9	chr9	120366594	120367085	(18027632)	C	MLT1D	LTR/ERVL-MaLR	(4)	501	1	4164899
427	31.6	6.6	0.6	chr9	121221555	121221734	(17172983)	+	MIR3	SINE/MIR	6	196	(12)	4166532
2434	8.1	0.7	0.0	chr9	122828828	122829135	(15565582)	+	AluSx1	SINE/Alu	1	310	(2)	4169621
211	34.6	12.1	1.2	chr9	123482564	123482819	(14911898)	C	L2b	LINE/L2	(0)	3426	3091	4170786
3069	23.1	9.6	4.3	chr9	123851416	123852339	(14542378)	+	MLT1F-int	LTR/ERVL-MaLR	461	1438	(51)	4171375
221	30.8	15.8	2.2	chr9	123852391	123852526	(14542191)	+	L2c	LINE/L2	3183	3340	(47)	4171376
484	36.0	4.3	3.8	chr9	124110555	124110664	(14284053)	C	MIRb	SINE/MIR	(14)	254	145	4171951
2731	9.6	0.3	1.4	chr9	124110665	124111032	(14283685)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4171952
359	31.1	8.2	0.0	chr9	124415725	124415859	(13978858)	+	MIRb	SINE/MIR	36	182	(86)	4172519
218	10.9	14.8	0.0	chr9	124772028	124772073	(13622644)	+	MIR3	SINE/MIR	104	157	(51)	4173184
498	25.0	14.8	0.0	chr9	125951019	125951162	(12443555)	+	MIRb	SINE/MIR	87	255	(13)	4175563
61	9.4	0.0	0.0	chr9	126082982	126083072	(12311645)	+	(TGTG)n	Simple_repeat	1	91	(0)	4175820
2090	10.4	0.4	0.0	chr9	129824318	129824595	(8570122)	+	AluSx1	SINE/Alu	2	280	(32)	4183723
18	27.5	0.0	0.0	chr9	132582025	132582072	(5812645)	+	GA-rich	Low_complexity	1	48	(0)	4189187
292	32.6	14.0	0.0	chr9	136568086	136568392	(1826325)	+	L1MB5	LINE/L1	5818	6174	(0)	4194500
918	18.7	11.3	0.0	chr9	137294334	137294568	(1100149)	+	MLT1J	LTR/ERVL-MaLR	42	306	(206)	4195471
1762	9.2	0.3	8.4	chrX	599540	599849	(155441046)	C	LTR7B	LTR/ERV1	(179)	285	1	4358959
33	0.0	0.0	0.0	chrX	635858	635885	(155405010)	+	(GA)n	Simple_repeat	1	28	(0)	4359041
4581	11.6	4.0	1.1	chrX	1059706	1060435	(154980460)	+	LTR17	LTR/ERV1	1	752	(28)	4360028
493	19.6	0.0	0.0	chrX	1060437	1060528	(154980367)	+	LTR17	LTR/ERV1	688	779	(1)	4360029
301	31.4	3.5	5.8	chrX	1060534	1060739	(154980156)	+	L1ME3Cz	LINE/L1	205	405	(592)	4360030
2284	11.8	0.0	0.0	chrX	2182202	2182498	(153858397)	C	AluSg	SINE/Alu	(10)	300	4	4362325
3449	13.2	0.5	0.4	chrX	2242427	2242979	(153797916)	+	MER41A	LTR/ERV1	1	554	(0)	4362464
3914	6.4	1.6	8.1	chrX	2549004	2549595	(153491300)	C	MER41A	LTR/ERV1	(0)	554	2	4363106
6309	10.1	3.9	2.1	chrX	23659883	23660832	(132380063)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	4397752
627	18.0	8.6	2.1	chrX	34557887	34558028	(121482867)	C	MER5A1	DNA/hAT-Charlie	(14)	152	1	4413970
444	37.0	3.2	0.0	chrX	34558037	34558220	(121482675)	C	LTR33	LTR/ERVL	(272)	243	54	4413969
327	27.8	7.9	4.3	chrX	38871703	38871779	(117169116)	C	MLT1K	LTR/ERVL-MaLR	(2)	593	503	4419631
51	1.9	0.0	1.8	chrX	38871780	38871835	(117169060)	+	(GTTTGCATA)n	Simple_repeat	1	56	(0)	4419632
327	27.8	7.9	4.3	chrX	38871836	38871964	(117168931)	C	MLT1K	LTR/ERVL-MaLR	(93)	502	380	4419631
7938	18.2	6.0	3.2	chrX	67093931	67095150	(88945745)	+	MSTB-int	LTR/ERVL-MaLR	361	1647	(4)	4454432
195	33.5	10.8	0.7	chrX	69221853	69222002	(86818893)	+	MIRc	SINE/MIR	9	175	(93)	4457792
12	25.6	2.4	0.0	chrX	71068325	71068366	(84972529)	+	G-rich	Low_complexity	1	43	(0)	4460743
17	5.3	12.5	0.0	chrX	71068423	71068462	(84972433)	+	(GCAC)n	Simple_repeat	1	45	(0)	4460744
287	30.1	5.6	8.5	chrX	71957791	71958048	(84082847)	C	L2c	LINE/L2	(25)	3362	3113	4462444
19	19.7	0.0	2.1	chrX	74325973	74326020	(81714875)	+	(CCGCC)n	Simple_repeat	1	48	(0)	4465456
2106	8.1	3.2	0.4	chrX	74326027	74326297	(81714598)	C	AluSg	SINE/Alu	(31)	279	1	4465457
3348	6.0	0.0	0.9	chrX	111543807	111544258	(44496637)	+	LTR7	LTR/ERV1	1	448	(2)	4510064
20487	9.2	5.5	3.1	chrX	111544261	111547467	(44493428)	+	HERVH-int	LTR/ERV1	1	3290	(4423)	4510064
357	17.9	4.5	0.0	chrX	122220512	122220595	(33820300)	+	MER61-int	LTR/ERV1	434	521	(6667)	4525267
4530	18.3	6.0	7.3	chrX	122220748	122222003	(33818892)	+	MER61-int	LTR/ERV1	3991	4917	(300)	4525268
5957	23.8	5.4	3.6	chrX	139850936	139852031	(16188864)	+	MSTD-int	LTR/ERVL-MaLR	540	1661	(74)	4551255
9062	17.7	0.8	2.1	chrX	146542225	146543897	(9496998)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1651	2	4560639