16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
32	0.0	0.0	0.0	chr1	7434452	7434481	(241521941)	+	(CATT)n	Simple_repeat	1	30	(0)	9842
204	34.9	0.0	11.6	chr1	7434483	7434581	(241521841)	C	L2b	LINE/L2	(8)	3367	3282	9843
17789	20.4	2.6	2.7	chr1	8921232	8924068	(240032354)	+	HERVFH21-int	LTR/ERV1	1	2761	(3768)	12555
2701	12.6	7.7	0.6	chr1	12654608	12655079	(236301343)	+	LTR22B1	LTR/ERVK	1	508	(18)	20185
18	3.8	0.0	9.1	chr1	12655136	12655168	(236301254)	+	(AT)n	Simple_repeat	1	33	(0)	20186
383	27.1	7.8	4.3	chr1	12655277	12655578	(236300844)	C	MER52-int	LTR/ERV1	(3896)	2643	2496	20184
441	29.4	0.7	0.7	chr1	12655729	12655865	(236300557)	C	MER66-int	LTR/ERV1	(4028)	2648	2512	20187
744	31.7	2.9	0.0	chr1	12655867	12656134	(236300288)	C	MER52-int	LTR/ERV1	(5274)	1265	990	20184
934	10.0	0.0	0.0	chr1	13674666	13674775	(235281647)	+	AluSp	SINE/Alu	175	284	(29)	21871
40	0.0	0.0	4.3	chr1	13674777	13674822	(235281600)	+	(AAAAT)n	Simple_repeat	1	46	(0)	21872
385	23.6	0.0	1.4	chr1	13674827	13674899	(235281523)	C	L1MEh	LINE/L1	(2156)	79	8	21870
278	30.9	1.2	0.0	chr1	13674996	13675076	(235281346)	C	Charlie25	DNA/hAT-Charlie	(979)	1545	1464	21857
2770	18.9	3.9	1.6	chr1	13675085	13676015	(235280407)	C	L1ME1	LINE/L1	(22)	6157	5168	21873
715	29.1	9.6	6.3	chr1	14922012	14922210	(234034212)	+	Charlie8	DNA/hAT-Charlie	337	549	(1879)	24174
2432	9.1	0.3	0.0	chr1	15956899	15957206	(232999216)	+	AluSx3	SINE/Alu	1	309	(2)	26398
890	30.5	7.4	6.1	chr1	15957207	15957950	(232998472)	C	L2a	LINE/L2	(262)	3164	2430	26397
685	26.3	1.6	3.9	chr1	16598273	16598476	(232357946)	C	L1ME3	LINE/L1	(1)	6334	6134	27795
2564	16.5	0.5	0.2	chr1	16598477	16598907	(232357515)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	27796
20	27.0	3.0	3.9	chr1	18642913	18643012	(230313410)	+	G-rich	Low_complexity	1	103	(0)	32098
184	33.3	1.7	1.7	chr1	18901063	18901120	(230055302)	+	MIRb	SINE/MIR	207	264	(4)	32656
260	34.6	4.6	0.0	chr1	18901468	18901571	(230054851)	+	L2c	LINE/L2	3276	3384	(3)	32660
192	25.0	13.7	4.3	chr1	18901628	18901719	(230054703)	+	MIRb	SINE/MIR	100	201	(67)	32661
12	21.6	0.0	0.0	chr1	22924542	22924573	(226031849)	+	(CCCCT)n	Simple_repeat	1	32	(0)	41251
1351	16.6	8.8	5.7	chr1	26245039	26245334	(222711088)	C	AluJr	SINE/Alu	(5)	307	2	48903
405	32.4	6.5	1.1	chr1	26245638	26245812	(222710610)	C	MIRb	SINE/MIR	(1)	267	83	48904
566	30.9	0.6	0.6	chr1	29113588	29113750	(219842672)	+	MIRb	SINE/MIR	17	179	(89)	55954
2566	16.6	2.2	1.1	chr1	29493989	29494907	(219461515)	C	L1MB7	LINE/L1	(357)	5827	4904	56714
3067	19.8	3.1	1.2	chr1	29494909	29495598	(219460824)	C	L1MC3	LINE/L1	(378)	7407	6704	56713
663	33.4	8.8	5.2	chr1	29564225	29565515	(219390907)	C	HERV4_I-int	LTR/ERV1	(3938)	4863	3317	56861
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
1916	14.1	2.4	1.0	chr1	35290440	35290730	(213665692)	C	AluJr	SINE/Alu	(16)	296	2	68471
631	15.7	1.6	0.8	chr1	35290733	35290860	(213665562)	+	L1MB8	LINE/L1	6045	6173	(5)	68472
473	34.5	3.4	7.1	chr1	39620585	39620862	(209335560)	+	MLT1J2	LTR/ERVL-MaLR	171	437	(11)	77071
488	28.0	3.2	2.6	chr1	39620998	39621202	(209335220)	+	MIRb	SINE/MIR	2	217	(51)	77073
235	26.2	1.6	0.0	chr1	39621358	39621418	(209335004)	C	L2a	LINE/L2	(11)	3415	3354	77074
281	23.1	8.4	0.0	chr1	39621568	39621632	(209334790)	+	MER5B	DNA/hAT-Charlie	59	129	(49)	77075
2407	10.0	0.0	0.0	chr1	39621643	39621952	(209334470)	C	AluSx4	SINE/Alu	(0)	310	1	77076
635	34.1	13.1	2.2	chr1	40042260	40043053	(208913369)	C	L2c	LINE/L2	(91)	3296	2399	77998
196	36.0	0.0	0.0	chr1	40043032	40043117	(208913305)	C	L2b	LINE/L2	(283)	3092	3007	77999
2306	10.0	0.0	0.0	chr1	40043194	40043494	(208912928)	C	AluSg	SINE/Alu	(8)	302	2	78000
1103	17.0	3.2	0.9	chr1	40666254	40666467	(208289955)	+	MER20	DNA/hAT-Charlie	1	219	(0)	79271
426	17.4	0.0	0.0	chr1	40690367	40690435	(208265987)	C	AluJo	SINE/Alu	(17)	295	227	79336
316	26.8	11.8	0.8	chr1	40690452	40690579	(208265843)	C	MIRc	SINE/MIR	(24)	244	101	79337
465	25.4	6.6	1.1	chr1	40690918	40691085	(208265337)	+	MIRc	SINE/MIR	32	217	(51)	79338
287	30.2	5.8	4.8	chr1	41136672	41136773	(207819649)	C	L1MC4	LINE/L1	(2852)	3362	3258	80240
1899	17.3	0.3	1.3	chr1	41136774	41137080	(207819342)	C	AluJr4	SINE/Alu	(8)	304	1	80242
494	28.1	4.9	2.5	chr1	41137081	41137384	(207819038)	C	L1MC4	LINE/L1	(2957)	3257	2946	80240
235	34.6	3.1	7.5	chr1	41241080	41241279	(207715143)	+	L3	LINE/CR1	3905	4095	(4)	80409
390	28.2	3.7	5.2	chr1	41516381	41516571	(207439851)	+	L2a	LINE/L2	2485	2672	(747)	80956
274	35.1	12.0	1.6	chr1	41516649	41517082	(207439340)	+	L2a	LINE/L2	2942	3426	(0)	80956
1246	16.5	6.7	5.2	chr1	41784186	41784492	(207171930)	+	MER33	DNA/hAT-Charlie	13	324	(0)	81434
185	28.5	14.2	6.8	chr1	41784613	41784774	(207171648)	C	MIRc	SINE/MIR	(81)	187	12	81435
1769	13.8	5.3	3.0	chr1	42271643	42271938	(206684484)	C	AluJr	SINE/Alu	(5)	307	5	82201
1990	15.7	0.0	3.1	chr1	44692725	44693042	(204263380)	C	AluJr	SINE/Alu	(4)	308	1	86499
336	27.4	8.7	7.7	chr1	44693044	44693225	(204263197)	C	MER5A	DNA/hAT-Charlie	(5)	184	1	86500
2169	13.0	0.0	1.0	chr1	45668373	45668680	(203287742)	+	AluSz	SINE/Alu	2	306	(6)	88499
1065	17.2	6.6	3.0	chr1	45668774	45668976	(203287446)	+	AluJr	SINE/Alu	84	294	(18)	88500
1082	22.3	15.9	5.7	chr1	45668982	45669168	(203287254)	+	Charlie2b	DNA/hAT-Charlie	1380	1586	(1196)	88501
2039	15.6	0.0	0.3	chr1	46529747	46530047	(202426375)	+	AluJb	SINE/Alu	1	300	(12)	90201
12564	15.7	4.3	2.9	chr1	50811325	50813233	(198143189)	+	L1PA15	LINE/L1	4928	6785	(0)	97468
2556	8.0	0.0	0.0	chr1	51367850	51368161	(197588261)	+	AluSx	SINE/Alu	1	312	(0)	98537
2283	10.9	0.0	2.2	chr1	51486136	51486447	(197469975)	+	AluSq2	SINE/Alu	1	305	(8)	98759
3421	21.3	9.7	7.3	chr1	51486448	51486670	(197469752)	+	BLACKJACK	DNA/hAT-Blackjack	2174	2349	(620)	98756
1925	10.7	7.8	5.0	chr1	51486671	51486969	(197469453)	C	AluSq	SINE/Alu	(5)	308	1	98760
3421	21.3	9.7	7.3	chr1	51486970	51487534	(197468888)	+	BLACKJACK	DNA/hAT-Blackjack	2350	2966	(3)	98756
904	16.7	1.2	6.1	chr1	52782381	52782560	(196173862)	C	AluJo	SINE/Alu	(13)	299	129	101744
1745	13.7	0.0	12.6	chr1	52782579	52782920	(196173502)	C	AluJr4	SINE/Alu	(13)	299	1	101745
2363	10.2	0.0	0.0	chr1	52782932	52783226	(196173196)	C	AluSx1	SINE/Alu	(17)	295	1	101746
266	17.7	9.2	1.2	chr1	53230259	53230338	(195726084)	C	L1ME3Cz	LINE/L1	(64)	933	847	102694
1509	18.9	1.0	7.4	chr1	53230416	53230738	(195725684)	C	AluJr4	SINE/Alu	(10)	302	1	102695
460	20.7	19.4	1.4	chr1	53230750	53231014	(195725408)	C	L1ME3Cz	LINE/L1	(318)	679	409	102696
2308	10.5	0.0	0.0	chr1	53308993	53309287	(195647135)	+	AluSx1	SINE/Alu	1	295	(17)	102841
502	29.9	4.0	4.9	chr1	53309288	53309311	(195647111)	+	MIRb	SINE/MIR	192	212	(56)	102840
353	29.5	0.9	3.7	chr1	53309375	53309483	(195646939)	C	MIR	SINE/MIR	(65)	197	92	102842
2011	14.4	13.8	1.1	chr1	54155713	54156085	(194800337)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	104539
456	32.2	8.8	5.4	chr1	54563298	54563537	(194392885)	+	MIRb	SINE/MIR	3	251	(17)	105380
189	38.7	3.9	0.0	chr1	54563518	54563592	(194392830)	C	L2c	LINE/L2	(19)	3368	3291	105381
1954	12.3	1.6	5.5	chr1	54563641	54563777	(194392645)	+	AluJb	SINE/Alu	1	133	(179)	105382
2268	10.2	0.0	2.0	chr1	54563778	54564082	(194392340)	+	AluSz	SINE/Alu	1	299	(13)	105383
2458	26.1	13.5	3.6	chr1	55135916	55137419	(193819003)	C	L2a	LINE/L2	(0)	3426	1765	106526
297	32.3	5.6	11.9	chr1	56507384	56507631	(192448791)	C	L2b	LINE/L2	(0)	3387	3155	108983
1917	21.2	7.7	8.1	chr1	56507632	56508138	(192448284)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	108984
249	32.3	5.6	11.9	chr1	56508139	56508174	(192448248)	C	L2b	LINE/L2	(233)	3154	3122	108983
355	27.0	3.1	9.3	chr1	56706923	56707061	(192249361)	+	MER5A	DNA/hAT-Charlie	16	145	(44)	109364
679	13.0	2.2	1.5	chr1	58047185	58047317	(190909105)	C	MER33	DNA/hAT-Charlie	(22)	302	169	112068
324	12.8	0.0	0.0	chr1	58047340	58047386	(190909036)	C	MER33	DNA/hAT-Charlie	(259)	65	25	112068
180	28.7	5.4	10.3	chr1	59203324	59203420	(189753002)	C	OldhAT1	DNA/hAT-Ac	(68)	2780	2689	114430
251	18.1	9.3	6.5	chr1	59203430	59203550	(189752872)	+	MIR3	SINE/MIR	42	171	(37)	114431
708	27.6	8.8	4.4	chr1	59203549	59203798	(189752624)	+	MIRb	SINE/MIR	7	268	(0)	114432
23	5.7	2.6	2.5	chr1	59297041	59297079	(189659343)	+	(CCT)n	Simple_repeat	1	40	(0)	114621
695	30.3	8.3	3.1	chr1	60400080	60400467	(188555955)	+	MLT1I	LTR/ERVL-MaLR	2	411	(0)	116491
264	29.8	5.1	1.5	chr1	62393431	62393563	(186562859)	+	L2	LINE/L2	1964	2101	(1318)	120154
237	22.2	3.9	12.4	chr1	62393686	62393798	(186562624)	C	Charlie24	DNA/hAT-Charlie	(0)	2450	2348	120155
234	37.3	5.1	1.6	chr1	62393881	62394125	(186562297)	+	L2	LINE/L2	2294	2547	(872)	120154
1098	30.2	12.0	2.7	chr1	62599098	62599691	(186356731)	+	L2a	LINE/L2	2783	3426	(0)	120501
279	32.2	10.2	11.2	chr1	64261182	64261450	(184694972)	+	MIRb	SINE/MIR	3	268	(0)	123559
3164	17.7	5.6	3.1	chr1	65458252	65459001	(183497421)	C	L1MCa	LINE/L1	(4694)	2057	1288	125821
14456	6.3	1.4	0.0	chr1	67290865	67292750	(181663672)	+	HERVL-int	LTR/ERVL	3314	5225	(429)	128560
17	0.0	0.0	0.0	chr1	67292757	67292775	(181663647)	+	(AT)n	Simple_repeat	1	19	(0)	128561
707	17.1	0.0	0.0	chr1	67292776	67292898	(181663524)	C	MER34	LTR/ERV1	(295)	247	125	128562
2163	13.9	0.0	0.0	chr1	67292974	67293276	(181663146)	C	AluSz6	SINE/Alu	(9)	303	1	128563
1353	27.5	5.5	6.7	chr1	67872275	67872859	(181083563)	C	LTR67B	LTR/ERVL	(0)	620	43	129737
513	23.6	3.2	3.0	chr1	68119626	68119775	(180836647)	+	LTR16C	LTR/ERVL	353	493	(2)	130113
212	24.1	20.0	2.5	chr1	68120151	68120269	(180836153)	C	MIR3	SINE/MIR	(14)	194	50	130114
6793	24.6	2.4	4.1	chr1	69453903	69455660	(179500762)	+	MSTD-int	LTR/ERVL-MaLR	2	1729	(6)	132037
1477	23.5	5.3	2.3	chr1	69455667	69456050	(179500372)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	132037
4223	9.7	5.8	0.3	chr1	70366448	70366861	(178589561)	C	MER41B	LTR/ERV1	(0)	634	213	133302
3495	8.5	5.7	3.2	chr1	70366862	70367359	(178589063)	C	LTR10F	LTR/ERV1	(0)	511	1	133303
3498	14.6	4.0	3.1	chr1	70399357	70399597	(178556825)	C	MER39B	LTR/ERV1	(0)	653	426	133367
2001	13.9	1.0	2.3	chr1	70399598	70399898	(178556524)	C	AluSz6	SINE/Alu	(15)	297	1	133368
185	42.5	0.0	0.0	chr1	70707829	70707915	(178248507)	+	MIR3	SINE/MIR	30	116	(92)	133857
825	27.8	11.3	0.4	chr1	70707937	70708175	(178248247)	C	MIR	SINE/MIR	(8)	254	2	133858
247	28.8	0.0	4.0	chr1	71521300	71521375	(177435047)	C	MIR3	SINE/MIR	(3)	205	133	134970
1580	21.7	4.4	2.5	chr1	75438984	75439364	(173517058)	+	MSTD	LTR/ERVL-MaLR	1	425	(3)	139926
1179	24.7	7.1	3.1	chr1	75439366	75439437	(173516985)	+	L1MEd	LINE/L1	922	994	(6109)	139925
817	20.3	0.0	0.0	chr1	75439438	75439565	(173516857)	+	FLAM_A	SINE/Alu	2	129	(13)	139927
1179	24.7	7.1	3.1	chr1	75439566	75440048	(173516374)	+	L1MEd	LINE/L1	995	1501	(5602)	139925
2372	26.0	6.7	1.9	chr1	77362962	77364060	(171592362)	+	L2a	LINE/L2	2272	3426	(0)	142759
12	4.3	8.3	0.0	chr1	81023236	81023259	(167933163)	+	(CATCT)n	Simple_repeat	1	26	(0)	147888
1517	9.7	0.0	1.0	chr1	81655105	81655299	(167301123)	C	AluSc8	SINE/Alu	(118)	193	1	148787
551	28.1	0.0	0.0	chr1	81655323	81655457	(167300965)	C	MIRb	SINE/MIR	(107)	161	27	148788
510	32.9	12.5	2.9	chr1	83112240	83112658	(165843764)	+	L2c	LINE/L2	2921	3385	(2)	150762
347	29.6	7.7	2.3	chr1	83112964	83113136	(165843286)	+	MLT1K	LTR/ERVL-MaLR	403	585	(10)	150763
3529	20.1	8.4	4.7	chr1	85790544	85791456	(163164966)	+	Cheshire	DNA/hAT-Charlie	269	1218	(1202)	154743
1712	18.1	5.2	2.7	chr1	85791457	85791830	(163164592)	+	Cheshire	DNA/hAT-Charlie	1773	2156	(264)	154744
2119	9.4	5.1	0.0	chr1	86903602	86903878	(162052544)	C	AluSc	SINE/Alu	(16)	293	2	156320
2050	10.6	5.5	0.0	chr1	86909724	86909997	(162046425)	+	AluSx3	SINE/Alu	1	290	(21)	156329
379	26.2	9.0	0.0	chr1	92439417	92439572	(156516850)	C	MIR3	SINE/MIR	(9)	199	15	164474
407	22.1	2.1	5.9	chr1	92439668	92439768	(156516654)	+	MER96B	DNA/hAT-Tip100	3	99	(318)	164475
1846	10.4	3.9	5.4	chr1	92439769	92439850	(156516572)	C	Tigger4	DNA/TcMar-Tigger	(0)	2731	2651	164476
26	0.0	0.0	0.0	chr1	92439851	92439875	(156516547)	+	(TTTTG)n	Simple_repeat	1	25	(0)	164477
1846	10.4	3.9	5.4	chr1	92439876	92439983	(156516439)	C	Tigger4	DNA/TcMar-Tigger	(81)	2650	2549	164476
2264	8.9	2.0	0.3	chr1	92439984	92440276	(156516146)	C	AluSx1	SINE/Alu	(14)	298	1	164478
527	21.3	10.3	0.0	chr1	93569206	93569327	(155387095)	C	MIRb	SINE/MIR	(70)	198	63	166508
230	31.4	16.0	0.0	chr1	94267440	94267560	(154688862)	+	MIRb	SINE/MIR	117	260	(8)	167526
637	31.4	4.5	1.2	chr1	94267634	94267874	(154688548)	+	MIRb	SINE/MIR	1	268	(0)	167527
1509	18.9	11.0	0.3	chr1	95769409	95769796	(153186626)	+	Zaphod	DNA/hAT-Tip100	3597	4031	(0)	169790
517	32.2	7.9	4.3	chr1	95769838	95770142	(153186280)	+	L2b	LINE/L2	3058	3374	(1)	169791
12	10.0	0.0	0.0	chr1	98548990	98549011	(150407411)	+	(TTTC)n	Simple_repeat	1	22	(0)	173598
4543	12.5	1.3	0.5	chr1	100044801	100045524	(148910898)	C	L1PB2	LINE/L1	(1288)	4858	4125	175854
692	18.0	2.4	9.0	chr1	100045528	100045704	(148910718)	C	L1MA3	LINE/L1	(0)	6305	6141	175856
381	4.3	0.0	0.0	chr1	100045711	100045757	(148910665)	C	AluSz6	SINE/Alu	(12)	300	254	175857
327	16.1	0.0	0.0	chr1	100045777	100045832	(148910590)	+	AluYe5	SINE/Alu	245	300	(10)	175858
6860	15.0	4.6	2.9	chr1	100045834	100046212	(148910210)	C	L1M2	LINE/L1	(1056)	5087	4711	175859
1637	15.5	3.7	6.6	chr1	100268907	100269209	(148687213)	+	AluJb	SINE/Alu	1	294	(18)	176278
1735	13.8	10.3	0.0	chr1	100269364	100269632	(148686790)	C	AluJb	SINE/Alu	(12)	300	1	176279
289	5.4	0.0	0.0	chr1	100401121	100401157	(148555265)	+	MADE1	DNA/TcMar-Mariner	1	37	(43)	176519
476	25.0	16.5	0.0	chr1	100401210	100401341	(148555081)	+	L2a	LINE/L2	3267	3424	(2)	176520
286	18.4	2.0	0.0	chr1	100468580	100468628	(148487794)	+	MIR3	SINE/MIR	42	91	(117)	176632
17	20.7	0.0	0.0	chr1	100468652	100468690	(148487732)	+	(ATTC)n	Simple_repeat	1	39	(0)	176633
13	27.2	0.0	3.9	chr1	100468872	100468923	(148487499)	+	(ATTTT)n	Simple_repeat	1	52	(0)	176634
980	11.8	0.7	0.7	chr1	100468924	100469058	(148487364)	C	AluJo	SINE/Alu	(176)	136	2	176635
338	25.2	13.3	0.7	chr1	100871430	100871573	(148084849)	+	L1ME4a	LINE/L1	5956	6120	(4)	177157
253	7.3	0.0	0.0	chr1	100871582	100871622	(148084800)	+	Alu	SINE/Alu	261	301	(0)	177158
499	22.6	7.9	4.0	chr1	100871799	100871980	(148084442)	C	MIRb	SINE/MIR	(8)	260	71	177159
569	30.9	2.3	4.4	chr1	102330891	102331161	(146625261)	C	L1ME1	LINE/L1	(7)	6172	5908	179161
660	34.8	4.1	1.7	chr1	102331239	102331478	(146624944)	C	L2a	LINE/L2	(260)	3166	2921	179162
2424	18.3	0.4	3.7	chr1	102331483	102331964	(146624458)	C	MLT1C	LTR/ERVL-MaLR	(1)	466	1	179163
2397	5.7	0.0	6.0	chr1	103208112	103208426	(145747996)	C	AluY	SINE/Alu	(14)	297	2	180215
43827	18.2	0.8	1.6	chr1	104460226	104468198	(144488224)	C	HERVE_a-int	LTR/ERV1	(0)	7847	1	181727
297	27.3	5.5	3.2	chr1	108509799	108509923	(140446499)	C	Charlie4z	DNA/hAT-Charlie	(39)	128	1	186852
236	25.5	7.8	7.0	chr1	110522078	110522191	(138434231)	+	L2b	LINE/L2	3259	3373	(2)	190306
5156	26.9	12.4	2.1	chr1	114172874	114174380	(134782042)	C	L2a	LINE/L2	(1137)	2282	550	196166
1409	23.7	10.0	6.5	chr1	115613393	115614419	(133342003)	+	L2a	LINE/L2	2358	3425	(1)	198444
27	0.0	0.0	0.0	chr1	116492639	116492664	(132463758)	+	(T)n	Simple_repeat	1	26	(0)	199785
2318	9.8	0.3	0.0	chr1	116707159	116707454	(132248968)	C	AluSp	SINE/Alu	(16)	297	1	200140
543	31.3	2.0	0.0	chr1	117012240	117012434	(131943988)	C	MIRb	SINE/MIR	(36)	232	34	200617
915	13.6	0.8	0.0	chr1	117012576	117012707	(131943715)	C	AluJr4	SINE/Alu	(179)	133	1	200618
1697	19.0	0.0	6.1	chr1	117056752	117057078	(131899344)	+	AluJo	SINE/Alu	3	309	(3)	200693
1911	15.7	0.0	0.3	chr1	117057112	117057404	(131899018)	C	AluJb	SINE/Alu	(20)	292	1	200694
2123	14.9	4.5	0.3	chr1	117376251	117376592	(131579830)	+	LTR18A	LTR/ERVL	1	357	(0)	201219
2093	16.8	0.0	0.3	chr1	117376705	117377050	(131579372)	+	MER2	DNA/TcMar-Tigger	1	345	(0)	201220
1522	30.9	5.2	2.9	chr1	118758128	118759024	(130197398)	+	L1MA7	LINE/L1	1369	2568	(4918)	203127
11198	6.8	1.5	0.0	chr1	121510492	121511971	(127444451)	+	HERV9N-int	LTR/ERV1	1452	2953	(2421)	207152
9333	8.0	1.4	2.0	chr1	121511971	121513640	(127442782)	+	HERV9N-int	LTR/ERV1	3984	5374	(0)	207152
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
2249	8.8	1.4	0.0	chr1	150480749	150481031	(98475391)	C	AluSq2	SINE/Alu	(26)	287	1	219166
1778	17.4	1.7	0.3	chr1	150481033	150481326	(98475096)	C	AluJo	SINE/Alu	(14)	298	1	219167
18	22.7	4.8	3.1	chr1	150818041	150818102	(98138320)	+	GA-rich	Low_complexity	1	65	(0)	219887
12	13.9	0.0	0.0	chr1	151292744	151292767	(97663655)	+	(TGGG)n	Simple_repeat	1	24	(0)	220913
9129	19.5	6.2	6.7	chr1	151951510	151952122	(97004300)	+	MER65-int	LTR/ERV1	167	790	(4081)	222174
2244	10.2	0.0	0.3	chr1	151952123	151952415	(97004007)	C	AluSx4	SINE/Alu	(17)	293	2	222180
9129	19.5	6.2	6.7	chr1	151952416	151953298	(97003124)	+	MER65-int	LTR/ERV1	791	1694	(3177)	222174
284	27.4	8.9	0.9	chr1	153277764	153277877	(95678545)	+	MIRc	SINE/MIR	2	125	(143)	223847
267	32.4	1.0	2.9	chr1	153278297	153278401	(95678021)	+	MIRb	SINE/MIR	1	103	(165)	223848
31	12.6	0.0	0.0	chr1	153278437	153278497	(95677925)	+	(T)n	Simple_repeat	1	61	(0)	223849
1771	16.7	0.0	4.9	chr1	155305639	155305943	(93650479)	C	AluJb	SINE/Alu	(21)	291	2	227707
11828	18.0	8.1	7.7	chr1	155655994	155658020	(93298402)	C	HERV4_I-int	LTR/ERV1	(3567)	2972	951	228488
871	22.5	7.5	0.4	chr1	156588794	156589065	(92367357)	+	Tigger13a	DNA/TcMar-Tigger	371	663	(108)	230393
1907	20.6	6.5	0.9	chr1	156589098	156589331	(92367091)	C	MER34	LTR/ERV1	(1)	541	289	230394
1997	14.1	0.0	0.0	chr1	156589332	156589635	(92366787)	+	AluJb	SINE/Alu	1	304	(8)	230395
450	25.3	11.9	2.1	chr1	157483376	157483617	(91472805)	C	MLT1K	LTR/ERVL-MaLR	(160)	435	167	231767
5744	14.3	5.8	1.1	chr1	157487483	157488768	(91467654)	C	L1MA8	LINE/L1	(1)	6290	4909	231775
30605	6.4	0.4	0.4	chr1	161473230	161478266	(87478156)	+	HERV9NC-int	LTR/ERV1	40	5284	(834)	237606
287	27.6	12.9	3.6	chr1	162396809	162396955	(86559467)	C	MIRb	SINE/MIR	(45)	163	1	239050
356	36.9	5.1	0.0	chr1	164311147	164311295	(84645127)	C	MIR3	SINE/MIR	(17)	191	35	241892
636	34.6	6.8	3.8	chr1	164925087	164925513	(84030909)	+	L3	LINE/CR1	2498	2938	(1161)	242836
4230	23.3	8.6	3.8	chr1	165624346	165624550	(83331872)	C	L1MC4	LINE/L1	(1374)	6668	6451	243978
248	16.3	0.0	0.0	chr1	165624839	165624881	(83331541)	+	L1PB	LINE/L1	4799	4841	(1305)	243980
529	31.2	7.3	11.9	chr1	166287339	166288030	(82668392)	C	L1MEi	LINE/L1	(1482)	730	76	245054
51	2.1	0.0	0.0	chr1	166288031	166288078	(82668344)	+	(TC)n	Simple_repeat	1	48	(0)	245055
529	31.2	7.3	11.9	chr1	166288079	166288152	(82668270)	C	L1MEi	LINE/L1	(2137)	75	2	245054
34	5.5	0.0	0.0	chr1	171593249	171593286	(77363136)	+	(TA)n	Simple_repeat	1	38	(0)	252992
1052	9.8	0.0	0.0	chr1	171593591	171593723	(77362699)	+	AluSx	SINE/Alu	1	133	(179)	252993
8331	8.5	3.2	1.8	chr1	171854877	171856871	(77099551)	C	L1PREC2	LINE/L1	(0)	6160	4145	253455
10018	9.3	3.0	0.0	chr1	174652320	174653725	(74302697)	C	L1PA7	LINE/L1	(5009)	1452	4	257475
52949	8.9	1.6	0.8	chr1	175270246	175275346	(73681076)	+	PRIMA41-int	LTR/ERV1	658	5825	(1931)	258463
1345	24.9	7.5	2.5	chr1	176146314	176146814	(72809608)	+	MLT1F2	LTR/ERVL-MaLR	6	548	(0)	259770
4479	17.2	3.1	2.0	chr1	182468795	182470193	(66486229)	+	L1MB3	LINE/L1	4762	6180	(3)	269528
1529	25.8	6.3	5.2	chr1	182470203	182470798	(66485624)	+	L2a	LINE/L2	2807	3426	(0)	269522
381	32.3	8.4	8.2	chr1	183302158	183302446	(65653976)	C	L2c	LINE/L2	(12)	3375	3082	270884
2482	17.7	3.2	8.7	chr1	183302447	183303035	(65653387)	+	MER74A	LTR/ERVL	3	558	(0)	270885
381	32.3	8.4	8.2	chr1	183303036	183303099	(65653323)	C	L2c	LINE/L2	(306)	3081	3021	270884
263	28.4	1.3	1.3	chr1	186609392	186609466	(62346956)	C	PRIMAX-int	LTR/ERV1	(3767)	1104	1030	275821
1883	25.7	16.0	9.2	chr1	192142880	192143663	(56812759)	+	L1MC5a	LINE/L1	1012	1856	(921)	283027
2251	10.5	0.0	1.3	chr1	193079845	193080148	(55876274)	+	AluSq2	SINE/Alu	1	300	(13)	284319
6167	16.0	3.6	3.8	chr1	193080149	193080500	(55875922)	+	L1MB4	LINE/L1	5385	5729	(451)	284317
480	13.1	6.1	0.9	chr1	193080500	193080607	(55875815)	C	L1M4	LINE/L1	(1716)	4430	4317	284320
2186	13.4	0.3	0.0	chr1	196790445	196790726	(52165696)	+	AluSg	SINE/Alu	1	283	(27)	289085
2282	15.3	5.3	1.0	chr1	197436054	197436468	(51519954)	C	Tigger2a	DNA/TcMar-Tigger	(0)	434	1	289934
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
1625	13.2	0.4	0.4	chr1	201103044	201103270	(47853152)	+	AluSx3	SINE/Alu	81	307	(4)	295502
211	25.0	0.0	0.0	chr1	201103271	201103322	(47853100)	C	MIRc	SINE/MIR	(110)	158	107	295503
18	11.2	3.3	0.0	chr1	201609852	201609881	(47346541)	+	(AG)n	Simple_repeat	1	31	(0)	296357
2183	11.4	0.0	1.0	chr1	201936655	201936951	(47019471)	+	AluSx1	SINE/Alu	1	294	(18)	296877
848	29.7	5.2	12.9	chr1	201936952	201937165	(47019257)	+	L2a	LINE/L2	3123	3316	(110)	296872
2017	15.4	0.6	0.3	chr1	201937166	201937476	(47018946)	+	AluJo	SINE/Alu	1	312	(0)	296878
848	29.7	5.2	12.9	chr1	201937477	201937488	(47018934)	+	L2a	LINE/L2	3317	3317	(109)	296872
1982	15.0	0.0	0.7	chr1	201937489	201937782	(47018640)	+	AluJb	SINE/Alu	8	299	(13)	296879
354	22.0	1.3	0.0	chr1	202020557	202020647	(46935775)	+	MIR3	SINE/MIR	83	185	(45)	297048
254	29.5	8.9	0.9	chr1	202020714	202020826	(46935596)	+	MER102a	DNA/hAT-Charlie	143	265	(65)	297050
338	26.5	0.0	9.3	chr1	202021369	202021394	(46935028)	C	MIRc	SINE/MIR	(45)	223	200	297051
20	21.9	2.7	4.0	chr1	203018406	203018432	(45937990)	+	(TTATT)n	Simple_repeat	1	59	(17)	298929
18	11.6	0.0	4.9	chr1	203018433	203018473	(45937949)	+	(TTTTTC)n	Simple_repeat	1	41	(0)	298930
4881	13.2	0.1	1.1	chr1	204169282	204170036	(44786386)	+	MER49	LTR/ERV1	1	748	(175)	301117
398	18.2	2.2	2.2	chr1	204170049	204170138	(44786284)	+	LOR1-int	LTR/ERV1	1997	2086	(5036)	301118
679	29.3	5.8	5.7	chr1	204170227	204170737	(44785685)	+	LOR1-int	LTR/ERV1	7169	7604	(516)	301118
1635	18.6	1.7	2.0	chr1	204180029	204180329	(44776093)	+	AluJr	SINE/Alu	1	300	(12)	301133
11	18.5	0.0	7.1	chr1	204180364	204180405	(44776017)	+	(CTCCTTC)n	Simple_repeat	1	42	(0)	301134
2116	15.2	10.5	3.9	chr1	205193888	205194302	(43762120)	+	MER39	LTR/ERV1	259	706	(1)	302969
226	26.1	17.1	0.0	chr1	206477110	206477201	(42479221)	C	MIRc	SINE/MIR	(139)	129	19	305156
36	20.1	2.3	1.1	chr1	210718575	210718651	(38237771)	+	(AT)n	Simple_repeat	1	78	(0)	311571
48	0.0	0.0	0.0	chr1	210718652	210718692	(38237730)	+	(AC)n	Simple_repeat	1	41	(0)	311572
36	20.1	2.3	1.1	chr1	210718693	210718702	(38237720)	+	(AT)n	Simple_repeat	1	10	(0)	311573
739	18.7	0.0	0.0	chr1	210718703	210718825	(38237597)	C	MER33	DNA/hAT-Charlie	(201)	123	1	311567
447	26.3	9.4	8.3	chr1	211910897	211911149	(37045273)	C	MLT1O	LTR/ERVL-MaLR	(0)	542	287	313605
20841	22.3	3.8	5.1	chr1	212422944	212424880	(36531542)	+	PRIMA41-int	LTR/ERV1	946	2902	(4854)	314480
617	12.1	0.0	0.0	chr1	212424881	212424963	(36531459)	C	AluSc	SINE/Alu	(3)	306	224	314483
20841	22.3	3.8	5.1	chr1	212424964	212425850	(36530572)	+	PRIMA41-int	LTR/ERV1	2903	3800	(3956)	314480
355	27.6	10.1	6.4	chr1	212644786	212644955	(36311467)	+	MIR3	SINE/MIR	35	198	(10)	314903
399	27.5	13.3	9.4	chr1	212645228	212645653	(36310769)	+	L2c	LINE/L2	2942	3386	(1)	314904
605	30.4	7.5	2.1	chr1	213959410	213959727	(34996695)	+	MLT1H1	LTR/ERVL-MaLR	21	403	(192)	317000
465	25.0	1.7	0.0	chr1	213959760	213959875	(34996547)	+	MLT1H1	LTR/ERVL-MaLR	372	489	(0)	317000
2485	7.4	0.3	1.0	chr1	214495664	214495994	(34460428)	C	AluSp	SINE/Alu	(0)	313	1	317797
210	29.0	0.0	1.4	chr1	215635442	215635511	(33320911)	C	MIRb	SINE/MIR	(0)	268	200	319346
2233	11.3	0.0	0.0	chr1	215635532	215635853	(33320569)	C	AluSg	SINE/Alu	(0)	310	1	319347
235	29.3	2.4	5.8	chr1	215928037	215928123	(33028299)	C	L2c	LINE/L2	(19)	3368	3285	319721
1074	13.9	13.4	0.0	chr1	219723593	219723844	(29232578)	+	L1MDa	LINE/L1	3011	3301	(3236)	325032
10043	20.1	1.1	9.0	chr1	219723847	219724831	(29231591)	+	L1M2c	LINE/L1	842	1805	(5761)	325038
4079	14.3	3.1	1.5	chr1	220677158	220677884	(28278538)	+	L1MB3	LINE/L1	5277	6012	(171)	326569
1754	24.2	12.9	3.5	chr1	223878165	223878730	(25077692)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	1	331364
544	19.2	7.8	1.5	chr1	223878731	223878862	(25077560)	C	L1MA10	LINE/L1	(18)	6316	6176	331365
271	24.1	8.9	1.8	chr1	224045269	224045382	(24911040)	C	L4_B_Mam	LINE/RTE-X	(1226)	3715	3593	331669
985	12.1	0.0	0.7	chr1	224045384	224045523	(24910899)	+	AluJr4	SINE/Alu	1	139	(173)	331670
2256	8.4	3.9	1.0	chr1	225599524	225599821	(23356601)	+	AluSx	SINE/Alu	1	307	(5)	334207
2198	15.6	4.0	5.4	chr1	225599822	225600197	(23356225)	+	MSTB	LTR/ERVL-MaLR	51	425	(1)	334206
1137	23.8	12.2	5.9	chr1	225600198	225600221	(23356201)	+	L1MC4	LINE/L1	7869	7892	(150)	334205
817	16.4	1.4	0.7	chr1	225600253	225600392	(23356030)	+	AluJb	SINE/Alu	169	309	(3)	334208
316	23.4	7.8	4.1	chr1	225600395	225600446	(23355976)	+	L1M5	LINE/L1	2974	3025	(3121)	334209
503	6.6	5.0	0.0	chr1	225600447	225600522	(23355900)	+	MADE1	DNA/TcMar-Mariner	1	80	(0)	334210
2235	11.2	0.0	2.2	chr1	225897582	225897893	(23058529)	+	AluSx1	SINE/Alu	1	305	(7)	334769
336	33.0	1.7	0.0	chr1	225898379	225898493	(23057929)	+	MIR	SINE/MIR	77	193	(69)	334770
2244	8.0	0.7	1.7	chr1	226269937	226270225	(22686197)	C	AluSx1	SINE/Alu	(26)	286	1	335573
1706	19.2	14.9	6.5	chr1	226270226	226270554	(22685868)	+	L1M4a1	LINE/L1	721	1126	(1453)	335572
364	28.0	12.5	0.5	chr1	226424868	226425057	(22531365)	C	L2	LINE/L2	(610)	2809	2594	335873
243	27.9	6.7	8.9	chr1	226425053	226425221	(22531201)	+	L2c	LINE/L2	3223	3387	(0)	335874
245	21.1	8.2	5.3	chr1	226425219	226425313	(22531109)	C	MIRb	SINE/MIR	(0)	268	171	335875
195	27.9	3.2	4.7	chr1	226425325	226425388	(22531034)	+	MER5B	DNA/hAT-Charlie	87	149	(29)	335876
1841	14.6	0.0	7.0	chr1	226425427	226425576	(22530846)	C	7SLRNA	srpRNA	(27)	293	147	335877
204	28.6	13.4	0.0	chr1	226894435	226894518	(22061904)	C	MIRb	SINE/MIR	(92)	176	80	336648
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
5490	25.3	6.0	4.4	chr1	228655402	228655782	(20300640)	+	MER65-int	LTR/ERV1	4492	4870	(1)	338987
1855	14.7	6.5	1.1	chr1	228655783	228656160	(20300262)	+	MER65A	LTR/ERV1	1	400	(45)	338987
1033	17.5	5.9	0.6	chr1	228656161	228656337	(20300085)	C	AluJb	SINE/Alu	(11)	301	115	338992
2630	29.3	6.3	5.4	chr1	229826458	229828752	(19127670)	+	MER101-int	LTR/ERV1	2246	5748	(891)	340974
2096	10.8	0.3	1.7	chr1	231029219	231029514	(17926908)	+	AluJr	SINE/Alu	14	305	(7)	342792
239	31.9	6.0	0.0	chr1	231029526	231029619	(17926803)	C	MIRb	SINE/MIR	(162)	106	7	342793
13	13.1	0.0	0.0	chr1	231781355	231781379	(17175043)	+	(TAT)n	Simple_repeat	1	25	(0)	344060
270	24.2	8.4	4.8	chr1	231951389	231951514	(17004908)	+	Tigger19a	DNA/TcMar-Tigger	181	311	(12)	344295
332	35.8	5.8	4.4	chr1	231951512	231951780	(17004642)	+	L2c	LINE/L2	3106	3359	(16)	344296
2059	14.3	0.3	7.2	chr1	231951784	231952118	(17004304)	+	AluJr	SINE/Alu	1	312	(0)	344297
2394	9.0	0.0	1.0	chr1	232623327	232623636	(16332786)	+	AluY	SINE/Alu	4	310	(1)	345172
323	24.0	12.2	2.2	chr1	232623914	232624096	(16332326)	+	Charlie7a	DNA/hAT-Charlie	1	204	(68)	345173
1879	14.7	0.7	3.3	chr1	233264957	233265256	(15691166)	+	AluJr4	SINE/Alu	2	293	(19)	346117
334	27.7	6.6	7.0	chr1	233265369	233265712	(15690710)	+	MLT1J2	LTR/ERVL-MaLR	67	442	(2)	346118
3970	14.6	3.2	1.1	chr1	233679843	233680481	(15275941)	C	MER39B	LTR/ERV1	(0)	653	1	346752
30	19.7	3.3	3.2	chr1	234544489	234544580	(14411842)	+	G-rich	Low_complexity	1	95	(0)	348058
720	15.4	10.7	0.0	chr1	234597252	234597368	(14359054)	C	AluJr4	SINE/Alu	(180)	132	2	348153
392	28.7	7.2	0.0	chr1	235076235	235076363	(13880059)	+	L2a	LINE/L2	3287	3425	(1)	348976
1390	15.3	3.7	10.3	chr1	235107858	235108054	(13848368)	C	AluJr	SINE/Alu	(12)	300	101	349050
1583	12.7	0.5	0.0	chr1	235108055	235108267	(13848155)	+	AluSz6	SINE/Alu	1	214	(98)	349051
1390	15.3	3.7	10.3	chr1	235108268	235108390	(13848032)	C	AluJr	SINE/Alu	(212)	100	2	349050
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
1581	18.8	1.6	2.6	chr1	236424465	236424770	(12531652)	C	LTR53-int	LTR/ERVL	(2707)	622	320	351590
231	11.7	16.7	7.7	chr1	236424772	236424836	(12531586)	+	tRNA-Met-i	tRNA	2	73	(2)	351594
566	12.5	6.3	0.9	chr1	236424896	236425000	(12531422)	C	LTR53-int	LTR/ERVL	(3123)	206	96	351590
816	25.8	13.4	6.5	chr1	237863330	237863731	(11092691)	+	MLT1M	LTR/ERVL-MaLR	40	473	(199)	353889
2297	10.4	1.3	0.0	chr1	239985300	239985598	(8970824)	C	AluSx1	SINE/Alu	(9)	303	1	356949
200	28.2	3.7	2.8	chr1	243979767	243979872	(4976550)	C	L2a	LINE/L2	(54)	3372	3266	363402
2273	7.9	0.0	3.6	chr1	245362247	245362551	(3593871)	+	AluSc	SINE/Alu	1	294	(15)	365925
570	9.9	0.0	0.0	chr1	245362699	245362769	(3593653)	C	AluSx	SINE/Alu	(237)	75	5	365926
2259	12.8	0.3	0.0	chr1	245363190	245363495	(3592927)	C	AluSx	SINE/Alu	(5)	307	1	365927
1548	18.6	1.0	4.1	chr1	246504260	246504574	(2451848)	C	Tigger3a	DNA/TcMar-Tigger	(43)	305	1	367605
230	29.5	14.2	0.7	chr1	246504729	246504868	(2451554)	C	L2c	LINE/L2	(3)	3384	3223	367606
1341	13.9	16.3	0.4	chr1	246737250	246737501	(2218921)	+	AluJb	SINE/Alu	3	302	(10)	368019
2102	13.4	0.0	0.0	chr1	246737601	246737891	(2218531)	C	AluSz	SINE/Alu	(21)	291	1	368020
16319	8.1	0.5	0.5	chr1	247354310	247356802	(1599620)	+	HERVP71A-int	LTR/ERV1	5	2607	(4983)	369016
282	29.6	2.9	3.6	chr10	2532738	2532874	(131264548)	C	LTR16A	LTR/ERVL	(30)	421	286	373850
370	22.1	5.5	0.0	chr10	2532957	2533060	(131264362)	C	LTR16A	LTR/ERVL	(309)	142	33	373850
26959	8.9	1.5	1.0	chr10	5169492	5173286	(128624136)	C	LTR19-int	LTR/ERV1	(337)	5249	1436	377390
1637	14.7	5.0	1.7	chr10	11782048	11782340	(122015082)	C	AluJr	SINE/Alu	(0)	312	10	387510
2411	7.3	0.0	0.0	chr10	11782362	11782650	(122014772)	C	AluSx1	SINE/Alu	(19)	293	5	387511
451	25.7	9.0	9.0	chr10	13327268	13327559	(120469863)	+	L1ME4a	LINE/L1	5835	6121	(3)	390562
265	22.8	0.0	0.0	chr10	13327622	13327678	(120469744)	+	L1M5	LINE/L1	5548	5604	(569)	390564
300	23.6	7.3	0.0	chr10	13327768	13327856	(120469566)	+	L1ME3E	LINE/L1	5791	5886	(356)	390565
242	26.1	10.2	5.4	chr10	13327857	13328042	(120469380)	+	L1ME3E	LINE/L1	5934	6129	(114)	390565
1874	14.5	1.6	0.7	chr10	15024866	15025169	(118772253)	+	AluSx	SINE/Alu	2	308	(4)	393461
341	25.0	16.0	0.0	chr10	15025170	15025185	(118772237)	C	LTR52	LTR/ERVL	(404)	17	2	393459
231	30.5	4.5	0.0	chr10	15025193	15025297	(118772125)	+	MLT2F	LTR/ERVL	452	561	(2)	393462
1554	21.1	0.0	2.4	chr10	16257466	16257759	(117539663)	+	AluJr	SINE/Alu	3	289	(23)	395465
326	10.6	0.0	0.0	chr10	16257769	16257815	(117539607)	C	Charlie5	DNA/hAT-Charlie	(2533)	91	45	395466
2541	10.5	0.0	0.0	chr10	16377671	16377975	(117419447)	+	AluSg	SINE/Alu	1	305	(5)	395689
604	30.9	2.4	17.8	chr10	16377976	16378134	(117419288)	C	Zaphod	DNA/hAT-Tip100	(3695)	336	222	395686
2451	10.7	0.3	0.0	chr10	16378135	16378433	(117418989)	+	AluSx	SINE/Alu	1	300	(12)	395690
2472	8.1	0.0	0.0	chr10	21384009	21384305	(112413117)	+	AluSg	SINE/Alu	1	297	(13)	403571
1423	21.8	3.8	6.5	chr10	21384306	21384473	(112412949)	+	MER39	LTR/ERV1	538	706	(1)	403570
353	21.6	10.0	12.7	chr10	21384479	21384545	(112412877)	+	Kanga2_a	DNA/TcMar-Tc2	577	645	(243)	403572
1728	15.1	0.8	1.1	chr10	21384546	21384810	(112412612)	C	AluSx	SINE/Alu	(17)	295	32	403573
2978	14.4	2.9	1.1	chr10	22052880	22053357	(111744065)	C	LTR45B	LTR/ERV1	(0)	489	3	404746
4947	20.9	4.0	1.7	chr10	22305018	22306216	(111491206)	+	L1ME1	LINE/L1	4628	5886	(293)	405099
5370	19.1	4.7	3.0	chr10	27979473	27981331	(105816091)	+	L1MB4	LINE/L1	4266	6159	(21)	414278
1040	17.5	1.4	9.4	chr10	29242880	29243112	(104554310)	+	MER20	DNA/hAT-Charlie	4	217	(2)	416556
557	34.3	9.9	2.7	chr10	30904286	30905048	(102892374)	+	L2c	LINE/L2	2525	3357	(30)	419533
7069	12.1	3.1	3.7	chr10	32585376	32587056	(101210366)	C	L1PA7	LINE/L1	(0)	7573	5741	422152
1603	16.5	6.1	1.4	chr10	34709059	34709402	(99088020)	C	Tigger4b	DNA/TcMar-Tigger	(0)	361	1	425136
1042	26.0	7.8	4.6	chr10	34709427	34709837	(99087585)	C	LTR33A_	LTR/ERVL	(0)	531	107	425137
524	30.0	12.2	2.7	chr10	43058678	43059119	(90738303)	C	MLT1F2	LTR/ERVL-MaLR	(1)	559	70	432910
299	27.9	4.7	7.6	chr10	43059215	43059346	(90738076)	+	L2a	LINE/L2	3286	3413	(13)	432909
219	26.3	24.4	0.0	chr10	43396000	43396098	(90401324)	C	MER5A	DNA/hAT-Charlie	(4)	185	55	433408
2257	13.3	0.0	0.0	chr10	43428424	43428731	(90368691)	C	AluSz	SINE/Alu	(4)	308	1	433486
234	26.2	1.8	11.6	chr10	43428929	43428993	(90368429)	+	Charlie5	DNA/hAT-Charlie	4	65	(2559)	433487
2342	9.1	0.0	0.0	chr10	43428994	43429289	(90368133)	+	AluSc8	SINE/Alu	1	296	(15)	433488
474	26.8	5.2	4.1	chr10	44897958	44898128	(88899294)	C	MER5B	DNA/hAT-Charlie	(4)	174	2	435383
742	18.7	1.9	1.3	chr10	44898166	44898322	(88899100)	C	MER5B	DNA/hAT-Charlie	(20)	158	1	435384
334	26.8	7.8	5.6	chr10	45721397	45721558	(88075864)	+	Charlie4z	DNA/hAT-Charlie	1	166	(1)	436492
13	18.7	2.2	4.3	chr10	45750925	45750970	(88046452)	+	(ATTACTA)n	Simple_repeat	1	47	(0)	436547
392	25.2	7.2	5.9	chr10	45750989	45751140	(88046282)	C	Charlie4z	DNA/hAT-Charlie	(13)	154	1	436548
4728	9.6	0.1	6.2	chr10	46446452	46447173	(87350249)	+	L1PREC2	LINE/L1	5482	6159	(1)	437677
242	24.1	12.3	4.5	chr10	48606695	48606857	(85190565)	+	L2c	LINE/L2	3034	3215	(160)	440779
13	18.7	2.2	4.3	chr10	50091605	50091650	(83705772)	+	(ATTACTA)n	Simple_repeat	1	47	(0)	442854
16685	6.7	0.2	0.0	chr10	50262409	50264886	(83532536)	+	L1PA4	LINE/L1	14	2495	(3651)	443116
13	16.4	0.0	5.3	chr10	50265193	50265230	(83532192)	+	(ATCCTCC)n	Simple_repeat	1	38	(0)	443117
5130	23.6	6.4	4.5	chr10	57630982	57632895	(76164527)	C	L1MC4a	LINE/L1	(237)	7805	5787	452964
2194	20.6	10.8	2.7	chr10	58027408	58027967	(75769455)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	17	453502
374	26.0	5.0	0.0	chr10	58028373	58028500	(75768922)	+	L2a	LINE/L2	3233	3416	(10)	453503
27	3.5	0.0	0.0	chr10	58028509	58028538	(75768884)	+	(ATGA)n	Simple_repeat	1	30	(0)	453504
36385	5.6	0.7	0.1	chr10	64779896	64784327	(69013095)	C	HERV9-int	LTR/ERV1	(3932)	4504	43	463897
2640	6.5	0.3	0.0	chr10	68018987	68019295	(65778127)	C	AluSp	SINE/Alu	(3)	310	1	468364
2362	25.4	13.0	4.5	chr10	68019296	68019515	(65777907)	+	L1M5	LINE/L1	4676	4920	(1226)	468363
5773	19.4	9.2	2.8	chr10	68019520	68020484	(65776938)	+	L1MB3	LINE/L1	20	1052	(5332)	468365
11923	11.8	1.2	2.0	chr10	70794546	70796294	(63001128)	C	MER84-int	LTR/ERV1	(1984)	2970	1236	474121
957	19.3	6.9	0.0	chr10	70873899	70874074	(62923348)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	474257
433	34.0	2.6	0.6	chr10	71289169	71289349	(62508073)	C	MIR	SINE/MIR	(9)	199	9	474943
685	25.3	1.2	0.0	chr10	71290080	71290245	(62507177)	C	MER3	DNA/hAT-Charlie	(40)	169	2	474944
17	20.1	0.0	0.0	chr10	72101874	72101913	(61695509)	+	(TGAA)n	Simple_repeat	1	40	(0)	476530
1795	7.8	0.0	0.0	chr10	72101923	72102154	(61695268)	+	L1PA14	LINE/L1	5930	6161	(0)	476531
822	19.4	5.6	4.0	chr10	75014982	75015158	(58782264)	C	MER5A	DNA/hAT-Charlie	(2)	187	8	482275
344	27.9	12.5	4.8	chr10	75047736	75047984	(58749438)	C	L1ME4a	LINE/L1	(8)	6116	5846	482311
511	26.4	0.0	0.8	chr10	75048067	75048192	(58749230)	C	L1ME4a	LINE/L1	(440)	5684	5560	482311
309	33.5	16.2	2.1	chr10	75201658	75202123	(58595299)	+	L2c	LINE/L2	270	813	(2606)	482650
1085	20.6	2.9	1.9	chr10	75388228	75388435	(58408987)	C	MER63A	DNA/hAT-Blackjack	(0)	210	1	483022
719	23.8	3.6	6.6	chr10	75388515	75388712	(58408710)	+	MIR	SINE/MIR	2	193	(69)	483023
829	32.7	14.1	3.1	chr10	78841303	78842372	(54955050)	C	L2	LINE/L2	(757)	2662	1456	488559
8803	27.2	3.9	1.8	chr10	85284662	85287801	(48509621)	+	L1M3de	LINE/L1	2	2763	(4842)	497939
16839	15.3	7.0	5.4	chr10	86640995	86641646	(47155776)	C	ERV24B_Prim-int	LTR/ERV1	(4744)	2869	2284	499905
8058	17.3	1.6	4.9	chr10	86641644	86642370	(47155052)	C	ERV24B_Prim-int	LTR/ERV1	(6063)	1550	857	499905
226	8.1	2.6	0.0	chr10	87660774	87660834	(46136588)	+	L1MA9	LINE/L1	6275	6312	(0)	501622
190	18.8	0.0	0.0	chr10	87661046	87661077	(46136345)	+	L2c	LINE/L2	3344	3375	(12)	501623
2181	9.7	0.3	6.6	chr10	87790903	87791222	(46006200)	+	AluSz	SINE/Alu	1	300	(12)	501837
4470	16.7	5.6	1.3	chr10	88398602	88399758	(45397664)	+	L1MB7	LINE/L1	5450	6663	(19)	502770
1539	22.6	8.4	3.0	chr10	88399804	88400231	(45397191)	C	MLT1D	LTR/ERVL-MaLR	(40)	465	13	502773
42283	5.5	0.2	0.2	chr10	89406839	89412211	(44385211)	+	HERV9N-int	LTR/ERV1	1	5374	(0)	504332
1918	18.2	0.0	0.7	chr10	89516943	89517249	(44280173)	+	AluJr	SINE/Alu	3	307	(5)	504495
484	25.0	9.3	13.2	chr10	89517250	89517315	(44280107)	C	Charlie26a	DNA/hAT-Charlie	(94)	231	182	504494
1737	14.6	3.0	2.4	chr10	89517316	89517609	(44279813)	C	AluJr4	SINE/Alu	(15)	297	2	504496
484	25.0	9.3	13.2	chr10	89517610	89517701	(44279721)	C	Charlie26a	DNA/hAT-Charlie	(144)	181	76	504494
389	26.7	1.9	0.0	chr10	91880737	91880837	(41916585)	+	MIRb	SINE/MIR	77	179	(89)	508003
1322	23.4	13.1	2.4	chr10	91881105	91881696	(41915726)	C	L2a	LINE/L2	(0)	3426	2786	508004
242	35.3	8.6	3.9	chr10	93556879	93557111	(40240311)	+	MIRc	SINE/MIR	23	267	(1)	511358
17	0.0	7.4	0.0	chr10	93557190	93557216	(40240206)	+	(TTTTG)n	Simple_repeat	1	29	(0)	511359
360	32.2	9.9	4.7	chr10	97106925	97107181	(36690241)	+	CR1_Mam	LINE/CR1	1590	1861	(343)	517264
12	13.7	5.3	8.3	chr10	101133629	101133685	(32663737)	+	(TGCCTG)n	Simple_repeat	1	60	(0)	524526
637	30.1	0.3	0.7	chr10	101962526	101962719	(31834703)	C	MIRb	SINE/MIR	(6)	262	63	525988
2227	10.4	0.3	3.2	chr10	101962963	101963143	(31834279)	C	AluSx1	SINE/Alu	(5)	307	135	525989
363	12.0	0.0	0.0	chr10	102753185	102753234	(31044188)	C	AluYa8	SINE/Alu	(116)	194	145	527518
229	29.2	1.4	0.0	chr10	102753235	102753255	(31044167)	+	SVA_F	Retroposon/SVA	133	204	(1171)	527519
1123	23.6	4.4	5.3	chr10	103122675	103123085	(30674337)	+	MER39	LTR/ERV1	301	707	(0)	528243
1364	17.9	4.9	6.2	chr10	103123123	103123294	(30674128)	C	AluJo	SINE/Alu	(8)	304	130	528244
593	11.8	0.0	0.0	chr10	103123295	103123379	(30674043)	C	L1PA10	LINE/L1	(10)	6158	6074	528245
1364	17.9	4.9	6.2	chr10	103123380	103123514	(30673908)	C	AluJo	SINE/Alu	(183)	129	1	528244
266	29.7	7.3	2.9	chr10	103123520	103123623	(30673799)	+	MIRb	SINE/MIR	139	247	(21)	528246
365	38.8	4.1	0.0	chr10	105433978	105434142	(28363280)	+	MER91A	DNA/hAT-Tip100	19	190	(6)	532268
392	28.3	7.9	5.6	chr10	105434225	105434385	(28363037)	+	LTR78B	LTR/ERV1	221	385	(911)	532269
1869	17.1	0.0	0.4	chr10	109927676	109927956	(23869466)	C	AluJo	SINE/Alu	(30)	282	3	538613
213	30.9	6.7	8.9	chr10	110420568	110420826	(23376596)	C	L2	LINE/L2	(1406)	2013	1761	539471
293	25.2	12.7	1.9	chr10	112832528	112832632	(20964790)	C	AmnSINE2	SINE/tRNA-Deu	(240)	118	1	543278
333	28.1	3.5	3.5	chr10	114334391	114334534	(19462888)	+	MamSINE1	SINE/tRNA-RTE	4	147	(143)	545762
244	32.3	9.1	0.0	chr10	114334795	114334924	(19462498)	+	MIRc	SINE/MIR	20	162	(106)	545763
24192	6.6	0.5	0.6	chr10	115037522	115040476	(18756946)	+	HERV9N-int	LTR/ERV1	1	2953	(2421)	546982
10469	7.2	2.9	1.5	chr10	115040476	115042134	(18755288)	+	HERV9N-int	LTR/ERV1	4030	5374	(0)	546982
2185	12.2	0.0	0.0	chr10	117445614	117445899	(16351523)	+	AluSx1	SINE/Alu	2	287	(25)	550482
40	2.5	0.0	0.0	chr10	117445901	117445941	(16351481)	+	(CAA)n	Simple_repeat	1	41	(0)	550483
1216	16.5	7.3	7.9	chr10	117445942	117446200	(16351222)	C	L1MB7	LINE/L1	(63)	6121	5854	550481
480	34.8	9.2	3.2	chr10	120405149	120405641	(13391781)	+	L2a	LINE/L2	243	767	(2652)	555598
2687	18.8	1.9	2.5	chr10	120406343	120406387	(13391035)	C	MLT2B2	LTR/ERVL	(0)	515	469	555602
48	7.1	0.0	0.0	chr10	120406388	120406446	(13390976)	+	(TG)n	Simple_repeat	1	59	(0)	555603
2687	18.8	1.9	2.5	chr10	120406447	120406918	(13390504)	C	MLT2B2	LTR/ERVL	(47)	468	2	555602
4982	16.8	4.5	1.6	chr10	124104019	124104892	(9692530)	C	MER54A	LTR/ERVL	(0)	901	1	561364
194	35.1	11.7	3.2	chr10	124717689	124717844	(9079578)	C	MamRTE1	LINE/RTE-BovB	(976)	2836	2666	562347
700	16.7	0.9	0.0	chr10	124753669	124753782	(9043640)	+	MER8	DNA/TcMar-Tigger	1	115	(124)	562394
1234	22.3	0.8	14.0	chr10	124753900	124754057	(9043365)	+	MLT1A	LTR/ERVL-MaLR	4	152	(222)	562395
2227	10.6	0.7	0.0	chr10	124754058	124754359	(9043063)	C	AluSx	SINE/Alu	(8)	304	1	562396
281	28.6	6.7	3.5	chr10	125625180	125625295	(8172127)	+	L2b	LINE/L2	3246	3365	(10)	563799
358	34.6	4.0	4.3	chr10	126566296	126566688	(7230734)	C	L2a	LINE/L2	(12)	3414	2974	565018
1477	24.9	5.7	9.7	chr10	126619933	126620288	(7177134)	C	L1ME3A	LINE/L1	(845)	5301	4974	565089
242	19.6	0.0	0.0	chr10	126620391	126620436	(7176986)	C	L1ME3A	LINE/L1	(1354)	4792	4747	565089
246	36.1	0.8	0.8	chr10	126620476	126620595	(7176827)	C	LTR103_Mam	LTR/ERV1?	(8)	467	348	565092
498	18.2	20.3	0.0	chr10	127993687	127993768	(5803654)	C	MER45C	DNA/hAT-Tip100	(40)	913	800	566898
33	3.1	0.0	0.0	chr10	127993769	127993801	(5803621)	+	(GT)n	Simple_repeat	1	33	(0)	566899
498	18.2	20.3	0.0	chr10	127993802	127993844	(5803578)	C	MER45C	DNA/hAT-Tip100	(154)	799	757	566898
269	24.3	6.8	11.6	chr10	130181096	130181267	(3616155)	C	MER113B	DNA/hAT-Charlie	(74)	240	78	569223
321	31.0	7.6	0.7	chr10	130181539	130181684	(3615738)	C	LTR90A	LTR	(745)	231	75	569224
485	29.5	4.0	0.5	chr10	132029247	132029440	(1767982)	+	LTR67B	LTR/ERVL	413	613	(7)	571246
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
22390	14.6	4.0	3.6	chr11	3353238	3357886	(131728736)	C	HERVFH21-int	LTR/ERV1	(1791)	4738	1	576906
294	30.7	6.5	4.0	chr11	4154894	4155117	(130931505)	+	L2	LINE/L2	2245	2474	(945)	578455
4438	15.6	4.8	5.6	chr11	4155172	4156511	(130930111)	C	L1MB7	LINE/L1	(0)	6184	4861	578456
15099	15.9	4.3	1.3	chr11	6806292	6808001	(128278621)	C	L1PA16	LINE/L1	(0)	6935	5179	581819
3031	17.6	3.2	0.2	chr11	6992804	6993343	(128093279)	+	MER41D	LTR/ERV1	1	557	(0)	582078
13	22.0	4.1	2.0	chr11	8927417	8927465	(126159157)	+	(TTCCT)n	Simple_repeat	1	51	(0)	584741
494	26.4	12.5	6.0	chr11	8927679	8927910	(126158712)	+	MamRep434	DNA/TcMar-Tigger	75	329	(97)	584742
309	0.0	0.0	0.0	chr11	9566557	9566592	(125520030)	+	MER11C	LTR/ERVK	1	36	(1035)	586093
13196	16.0	5.5	1.8	chr11	10005711	10009081	(125077541)	+	MER50-int	LTR/ERV1	1	3362	(3843)	586915
900	27.1	4.5	0.5	chr11	11313624	11313874	(123772748)	+	MIRb	SINE/MIR	1	260	(8)	588996
258	36.4	9.3	1.7	chr11	11923165	11923343	(123163279)	+	MIR3	SINE/MIR	4	197	(11)	589943
1898	17.3	0.3	0.7	chr11	14468990	14469290	(120617332)	C	AluJr	SINE/Alu	(6)	306	7	594005
307	37.7	0.9	0.0	chr11	14702839	14702944	(120383678)	C	LTR16C	LTR/ERVL	(243)	295	189	594376
441	32.9	6.4	3.8	chr11	14702978	14703296	(120383326)	C	HAL1	LINE/L1	(2003)	504	177	594375
580	31.8	10.0	6.6	chr11	16955234	16955550	(118131072)	+	L2c	LINE/L2	3059	3387	(0)	597771
183	25.0	12.4	6.1	chr11	16955510	16955607	(118131015)	C	Tigger19b	DNA/TcMar-Tigger	(356)	194	90	597772
2177	30.0	6.2	2.4	chr11	17222580	17223257	(117863365)	+	L4_A_Mam	LINE/RTE-X	3984	4699	(291)	598321
616	26.8	6.8	0.0	chr11	17953645	17953823	(117132799)	C	L2a	LINE/L2	(0)	3426	3235	599622
1275	24.2	3.4	0.5	chr11	18187775	18188144	(116898478)	C	L1MD	LINE/L1	(542)	5817	5437	600023
1646	14.2	1.1	1.1	chr11	18188147	18188416	(116898206)	C	MLT1B	LTR/ERVL-MaLR	(120)	270	1	600024
228	28.1	0.0	3.0	chr11	18188502	18188567	(116898055)	C	L2c	LINE/L2	(384)	3003	2940	600025
20	19.3	0.0	2.0	chr11	19367900	19367948	(115718674)	+	(CATT)n	Simple_repeat	1	49	(0)	602075
356	13.7	0.0	0.0	chr11	20407708	20407758	(114678864)	+	Alu	SINE/Alu	2	52	(81)	603877
262	17.4	2.1	0.0	chr11	20407758	20407803	(114678819)	C	AluSx	SINE/Alu	(146)	166	120	603878
348	14.6	12.9	1.2	chr11	20407759	20407788	(114678834)	C	AluYa8	SINE/Alu	(217)	92	1	603879
393	34.6	5.5	7.3	chr11	21166982	21167421	(113919201)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	164	605093
11	21.4	4.4	2.1	chr11	30460195	30460239	(104626383)	+	(TTTTGCT)n	Simple_repeat	1	47	(0)	618506
1897	14.2	0.7	1.7	chr11	30460338	30460633	(104625989)	+	AluJr	SINE/Alu	1	293	(19)	618507
12	25.5	0.0	0.0	chr11	32146979	32147015	(102939607)	+	GA-rich	Low_complexity	1	37	(0)	621077
254	21.3	0.0	0.0	chr11	32147061	32147107	(102939515)	+	HERV3-int	LTR/ERV1	3317	3363	(5615)	621075
580	28.1	10.5	11.9	chr11	32339460	32339666	(102746956)	+	HAL1	LINE/L1	1347	1543	(964)	621420
903	23.0	6.6	1.4	chr11	32339668	32339883	(102746739)	C	MIR	SINE/MIR	(10)	252	25	621426
290	25.2	5.9	0.0	chr11	32339907	32340017	(102746605)	+	HAL1	LINE/L1	1543	1660	(847)	621420
29	0.0	0.0	0.0	chr11	32340018	32340042	(102746580)	+	(TG)n	Simple_repeat	1	25	(0)	621427
598	33.3	7.9	4.4	chr11	36435255	36435596	(98651026)	C	L2b	LINE/L2	(9)	3366	3012	628459
465	36.3	6.5	3.1	chr11	44166904	44167312	(90919310)	+	L1MEg	LINE/L1	97	519	(5617)	639661
285	28.3	22.7	0.5	chr11	46864106	46864290	(88222332)	+	MIRb	SINE/MIR	10	247	(21)	644797
354	29.4	11.1	2.9	chr11	46864742	46864914	(88221708)	+	MIRb	SINE/MIR	63	250	(18)	644798
259	33.0	0.0	4.8	chr11	57463521	57463625	(77622997)	+	MIR3	SINE/MIR	102	201	(7)	653756
394	32.4	10.9	4.2	chr11	58888959	58889842	(76196780)	C	L1ME3Cz	LINE/L1	(1569)	4577	3654	656074
1706	16.8	2.0	0.3	chr11	58889944	58890241	(76196381)	C	L1PA16	LINE/L1	(1)	6165	5863	656075
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
800	18.4	5.8	0.0	chr11	62907389	62907551	(72179071)	C	MER5A	DNA/hAT-Charlie	(0)	189	17	663092
1975	21.0	2.5	2.8	chr11	62907552	62908110	(72178512)	+	MER77	LTR/ERVL	1	660	(271)	663093
1241	12.2	0.0	0.0	chr11	63932439	63932602	(71154020)	C	AluSx3	SINE/Alu	(15)	296	133	664677
907	13.1	0.0	0.0	chr11	65381433	65381554	(69705068)	C	AluJr	SINE/Alu	(186)	126	5	667447
26	0.0	0.0	0.0	chr11	65381561	65381585	(69705037)	+	(T)n	Simple_repeat	1	25	(0)	667448
1523	10.1	5.7	1.4	chr11	65381590	65381807	(69704815)	C	AluJo	SINE/Alu	(34)	278	51	667449
487	28.9	9.5	2.6	chr11	66921579	66921773	(68164849)	+	MIRb	SINE/MIR	14	223	(45)	670488
2260	11.4	0.0	0.0	chr11	68306137	68306435	(66780187)	C	AluSq2	SINE/Alu	(14)	299	1	673183
1759	22.1	7.8	3.4	chr11	68306436	68306628	(66779994)	C	MLT1D	LTR/ERVL-MaLR	(312)	193	5	673182
237	29.9	0.0	1.5	chr11	68306661	68306728	(66779894)	C	MamRep605	LTR?	(237)	612	546	673184
567	19.5	4.5	10.8	chr11	71333431	71333597	(63753025)	C	LTR67B	LTR/ERVL	(453)	167	12	678077
453	34.7	3.6	7.4	chr11	71333721	71333978	(63752644)	+	MIRb	SINE/MIR	5	252	(16)	678078
2116	11.2	1.0	0.0	chr11	72367176	72367460	(62719162)	C	AluSz	SINE/Alu	(24)	288	1	679822
405	4.4	0.0	0.0	chr11	72367469	72367513	(62719109)	C	AluYk11	SINE/Alu	(266)	45	1	679823
1553	12.5	1.6	3.9	chr11	72367518	72367775	(62718847)	+	L1PA16	LINE/L1	5912	6163	(3)	679820
258	15.8	0.0	0.0	chr11	72367926	72367982	(62718640)	+	L1MB7	LINE/L1	6128	6184	(0)	679824
251	26.1	0.0	4.2	chr11	72367983	72368054	(62718568)	+	MIRb	SINE/MIR	200	268	(0)	679817
567	28.0	8.3	2.4	chr11	72368258	72368462	(62718160)	C	MIRb	SINE/MIR	(0)	268	51	679825
222	30.6	15.3	0.0	chr11	72744299	72744409	(62342213)	C	MIR3	SINE/MIR	(58)	150	20	680502
197	33.1	9.5	3.6	chr11	72744514	72744651	(62341971)	C	MIR3	SINE/MIR	(38)	170	24	680503
192	33.8	0.0	2.5	chr11	73137684	73137762	(61948860)	C	L2c	LINE/L2	(283)	3104	3028	681258
389	30.3	9.3	5.3	chr11	73138147	73138352	(61948270)	C	MIRb	SINE/MIR	(46)	222	8	681259
2003	16.3	0.3	0.7	chr11	73408498	73408798	(61677824)	+	AluJb	SINE/Alu	1	300	(12)	681767
263	32.3	9.2	0.0	chr11	73408917	73409083	(61677539)	+	L2c	LINE/L2	2671	2854	(565)	681768
356	36.4	9.1	3.5	chr11	73409117	73409458	(61677164)	+	L2c	LINE/L2	2947	3309	(78)	681768
311	38.2	4.6	4.6	chr11	74441297	74441447	(60645175)	+	MIR3	SINE/MIR	6	156	(52)	684073
2171	10.6	0.0	0.7	chr11	74555699	74555980	(60530642)	+	AluSz	SINE/Alu	1	280	(32)	684323
22	11.8	0.0	0.0	chr11	74555981	74556018	(60530604)	+	(AGGAG)n	Simple_repeat	1	38	(0)	684324
616	20.7	2.7	4.8	chr11	74556021	74556208	(60530414)	C	MER39	LTR/ERV1	(91)	616	433	684322
1159	20.7	0.9	0.0	chr11	74556212	74556419	(60530203)	+	AluJr	SINE/Alu	2	211	(101)	684325
380	34.6	9.4	0.0	chr11	75336751	75336932	(59749690)	C	MIRb	SINE/MIR	(9)	259	59	685827
184	30.4	1.8	0.0	chr11	75337006	75337061	(59749561)	+	L2c	LINE/L2	3313	3369	(18)	685828
886	15.1	0.0	0.0	chr11	75337169	75337294	(59749328)	+	AluJb	SINE/Alu	1	126	(186)	685829
585	16.5	0.0	0.0	chr11	75337297	75337393	(59749229)	+	AluJb	SINE/Alu	214	310	(2)	685829
2450	10.4	0.0	0.0	chr11	77900101	77900398	(57186224)	C	AluSc8	SINE/Alu	(13)	298	1	690836
563	20.0	12.8	0.0	chr11	77900634	77900783	(57185839)	C	MER104	DNA/TcMar-Tc2	(9)	172	1	690837
9528	20.3	2.3	3.8	chr11	78081300	78085065	(57001557)	+	HERVH-int	LTR/ERV1	1	3876	(3837)	691310
13	13.2	0.0	0.0	chr11	79243450	79243474	(55843148)	+	(AAAC)n	Simple_repeat	1	25	(0)	693531
229	26.2	3.6	0.0	chr11	79243772	79243851	(55842771)	C	MIRc	SINE/MIR	(135)	133	51	693532
2511	18.3	3.6	0.2	chr11	82704922	82705376	(52381246)	+	L1PB4	LINE/L1	5686	6156	(0)	699328
2125	26.4	0.9	5.4	chr11	82705377	82705597	(52381025)	C	MER97c	DNA/hAT-Tip100	(914)	215	1	699327
270	32.6	3.1	0.0	chr11	82705603	82705697	(52380925)	C	MIRb	SINE/MIR	(10)	258	161	699329
307	18.6	11.4	0.0	chr11	82705688	82705757	(52380865)	+	MIR	SINE/MIR	184	262	(0)	699330
28	7.9	0.0	0.0	chr11	83160322	83160361	(51926261)	+	(T)n	Simple_repeat	1	40	(0)	700166
1108	16.2	11.2	0.0	chr11	85081562	85081752	(50004870)	C	SSU-rRNA_Hsa	rRNA	(1061)	808	594	703369
335	18.8	0.0	3.0	chr11	85081737	85081802	(50004820)	C	SSU-rRNA_Hsa	rRNA	(984)	885	822	703370
1519	21.2	9.8	1.6	chr11	85081807	85082180	(50004442)	+	MER39B	LTR/ERV1	217	624	(29)	703368
4409	18.7	5.9	10.2	chr11	93601164	93601466	(41485156)	+	L1MC4	LINE/L1	7605	7894	(148)	715844
539	27.8	0.6	5.9	chr11	93601467	93601653	(41484969)	+	AluJr	SINE/Alu	129	305	(7)	715848
384	22.1	0.7	13.4	chr11	93601658	93601814	(41484808)	+	L1MC4	LINE/L1	7900	8036	(6)	715844
3092	25.6	11.9	2.3	chr11	94145742	94147172	(40939450)	+	L1MC4	LINE/L1	6414	8041	(1)	716740
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
989	22.1	0.9	3.2	chr11	101487382	101487601	(33599021)	C	L1PB4	LINE/L1	(6)	6150	5936	726454
8242	17.9	2.9	0.4	chr11	102476701	102478089	(32608533)	+	MER34-int	LTR/ERV1	1351	2775	(5432)	727996
558	19.3	13.5	0.0	chr11	102478092	102478200	(32608422)	C	FLAM_A	SINE/Alu	(12)	130	5	727997
15513	16.3	4.7	2.8	chr11	102478206	102478377	(32608245)	+	MER34-int	LTR/ERV1	2763	2936	(5271)	727996
599	25.8	8.8	1.2	chr11	103382832	103383179	(31703443)	C	LTR33A	LTR/ERVL	(111)	684	293	729373
347	26.3	10.1	0.0	chr11	103383205	103383337	(31703285)	C	LTR33A	LTR/ERVL	(590)	205	58	729373
710	27.4	3.9	6.0	chr11	106302957	106303274	(28783348)	C	PRIMA41-int	LTR/ERV1	(4029)	2647	2337	733371
1954	13.6	7.1	3.4	chr11	107050522	107050871	(28035751)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	734379
9889	9.3	9.9	0.6	chr11	107050872	107052304	(28034318)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	734379
1721	19.1	0.7	1.0	chr11	108804216	108804518	(26282104)	+	AluJb	SINE/Alu	1	302	(10)	737419
1128	24.7	5.5	6.9	chr11	108804523	108805055	(26281567)	C	MLT1E1A	LTR/ERVL-MaLR	(24)	656	24	737420
6573	17.1	3.4	6.5	chr11	108897512	108898842	(26187780)	C	LTR49-int	LTR/ERV1	(5042)	1289	1	737552
60050	8.7	3.1	0.9	chr11	110420020	110421366	(24665256)	+	PRIMA4-int	LTR/ERV1	2200	3517	(4753)	739811
231	28.4	8.2	0.0	chr11	111196754	111196820	(23889802)	+	Charlie4z	DNA/hAT-Charlie	4	76	(91)	741012
776	25.7	9.0	3.0	chr11	112311322	112311622	(22775000)	C	LTR16E1	LTR/ERVL	(1)	537	217	742933
424	26.4	5.3	1.4	chr11	112311869	112312014	(22774608)	C	MamGypLTR1a	LTR/Gypsy	(2)	782	631	742934
212	28.2	6.6	2.7	chr11	112740162	112740234	(22346388)	+	MIRc	SINE/MIR	84	159	(109)	743584
400	36.2	9.1	0.0	chr11	112740236	112740456	(22346166)	C	MIR	SINE/MIR	(3)	259	17	743585
689	31.4	13.4	6.7	chr11	113536703	113537389	(21549233)	+	L3	LINE/CR1	2403	3142	(957)	744717
808	13.5	0.0	0.0	chr11	114430652	114430762	(20655860)	C	FLAM_C	SINE/Alu	(12)	131	21	746256
281	17.3	0.0	0.2	chr11	114430830	114430882	(20655740)	C	MLT1J	LTR/ERVL-MaLR	(344)	168	83	746257
2146	10.9	1.0	3.9	chr11	115736766	115737076	(19349546)	C	AluSp	SINE/Alu	(11)	302	1	748171
1755	17.2	0.3	3.2	chr11	115737077	115737217	(19349405)	C	AluJo	SINE/Alu	(174)	138	1	748170
504	27.6	2.9	9.2	chr11	115737218	115737294	(19349328)	C	MIR3	SINE/MIR	(109)	99	24	748169
1096	27.6	13.3	1.6	chr11	116022301	116023184	(19063438)	C	L1MB5	LINE/L1	(4970)	2631	1611	748559
1979	17.3	0.0	0.7	chr11	117091778	117092084	(17994538)	C	AluJr	SINE/Alu	(7)	305	1	750504
1174	30.3	6.0	1.9	chr11	117092089	117092678	(17993944)	+	L2a	LINE/L2	2803	3426	(0)	750505
2310	10.2	0.0	3.7	chr11	119220156	119220300	(15866322)	C	AluSx	SINE/Alu	(173)	139	1	754478
1840	16.2	3.3	0.0	chr11	119220327	119220616	(15866006)	+	AluJr	SINE/Alu	1	300	(12)	754480
2200	9.2	3.6	0.0	chr11	119451247	119451540	(15635082)	C	AluSz	SINE/Alu	(7)	305	1	754896
358	30.1	15.0	5.3	chr11	119451541	119451597	(15635025)	+	LTR85a	LTR/Gypsy?	727	784	(0)	754895
189	29.6	3.6	0.0	chr11	119451743	119451796	(15634826)	C	L2	LINE/L2	(561)	2858	2803	754897
340	33.9	2.8	1.2	chr11	119451828	119452000	(15634622)	+	LTR103_Mam	LTR/ERV1?	26	201	(274)	754898
507	25.5	2.4	3.9	chr11	119733144	119733328	(15353294)	+	L2a	LINE/L2	3216	3420	(6)	755366
331	22.8	0.0	4.8	chr11	119733324	119733406	(15353216)	+	MIR3	SINE/MIR	73	151	(57)	755367
248	22.0	6.2	5.2	chr11	119733481	119733576	(15353046)	+	Charlie15a	DNA/hAT-Charlie	123	219	(5)	755368
4956	20.7	10.3	3.6	chr11	121300076	121301621	(13785001)	+	L1M4	LINE/L1	2	1664	(5853)	757895
804	12.8	4.9	0.6	chr11	121301628	121301784	(13784838)	+	L1MB7	LINE/L1	6021	6184	(0)	757896
2217	11.4	0.3	1.6	chr11	121315125	121315432	(13771190)	C	AluSx	SINE/Alu	(8)	304	1	757914
1568	21.3	8.0	4.7	chr11	121315433	121315681	(13770941)	C	L1ME2	LINE/L1	(2985)	3161	2888	757911
1053	30.8	6.0	4.8	chr11	121315682	121316268	(13770354)	+	MLT2F	LTR/ERVL	1	595	(68)	757915
1822	18.1	0.3	1.0	chr11	122857901	122858210	(12228412)	C	AluJb	SINE/Alu	(2)	310	3	760339
16241	14.7	3.9	1.2	chr11	124508346	124511242	(10575380)	C	L1PA13	LINE/L1	(3782)	2984	5	763130
329	28.0	5.6	2.0	chr11	129622665	129622841	(5463781)	C	L2c	LINE/L2	(13)	3374	3175	770584
3547	17.9	2.7	0.6	chr12	1760322	1760699	(131514610)	C	L1MB8	LINE/L1	(12)	6166	5782	781235
2145	19.3	6.7	5.3	chr12	1760700	1761241	(131514068)	+	MER44B	DNA/TcMar-Tigger	1	550	(0)	781236
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
15	19.7	0.0	0.0	chr12	2614972	2615000	(130660309)	+	A-rich	Low_complexity	1	29	(0)	782437
703	25.7	5.2	1.9	chr12	2615299	2615556	(130659753)	+	L1M5	LINE/L1	4342	4608	(1538)	782438
1877	12.2	0.3	5.3	chr12	2647841	2648161	(130627148)	+	AluJr	SINE/Alu	1	305	(7)	782469
391	34.1	4.0	2.3	chr12	3278085	3278258	(129997051)	C	MIRc	SINE/MIR	(8)	260	84	783597
371	25.5	17.4	2.9	chr12	3722293	3722430	(129552879)	C	MIRb	SINE/MIR	(32)	236	77	784302
557	29.9	4.3	0.0	chr12	3722847	3723003	(129552306)	+	MIR3	SINE/MIR	13	176	(32)	784303
195	30.9	2.4	0.0	chr12	4856371	4856451	(128418858)	+	MIR3	SINE/MIR	100	182	(26)	786192
693	27.5	9.8	1.3	chr12	5885440	5885671	(127389638)	C	MIR	SINE/MIR	(0)	262	9	787677
1767	12.8	0.7	8.5	chr12	6565153	6565345	(126709964)	C	AluJr	SINE/Alu	(9)	303	127	788950
2028	13.3	0.3	0.0	chr12	6565346	6565639	(126709670)	C	AluSx	SINE/Alu	(17)	295	1	788951
1767	12.8	0.7	8.5	chr12	6565640	6565774	(126709535)	C	AluJr	SINE/Alu	(186)	126	1	788950
18	23.9	2.7	4.0	chr12	6764989	6765063	(126510246)	+	(ATAATG)n	Simple_repeat	1	74	(0)	789349
193	32.9	8.1	2.5	chr12	7002023	7002103	(126273206)	C	MIR3	SINE/MIR	(22)	186	101	789773
454	25.2	13.9	0.6	chr12	10143037	10143192	(123132117)	C	MER58C	DNA/hAT-Charlie	(0)	215	36	794796
3215	24.1	7.2	1.4	chr12	10143600	10144704	(123130605)	+	L1MEc	LINE/L1	37	1209	(5191)	794797
1858	17.6	0.3	0.0	chr12	10236267	10236555	(123038754)	+	AluSz	SINE/Alu	1	290	(22)	794970
1585	13.6	1.0	15.3	chr12	12649938	12650289	(120625020)	C	AluJr	SINE/Alu	(10)	302	2	798503
1299	13.6	1.8	2.7	chr12	12720612	12720831	(120554478)	C	MER20	DNA/hAT-Charlie	(1)	218	1	798631
864	14.8	8.6	0.0	chr12	13864794	13864942	(119410367)	+	MER5B	DNA/hAT-Charlie	1	163	(15)	800425
189	33.9	4.0	8.3	chr12	13955856	13956274	(119319035)	C	L2c	LINE/L2	(60)	3327	2928	800559
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
1452	22.2	1.4	6.9	chr12	18107522	18107913	(115167396)	+	MLT1A	LTR/ERVL-MaLR	5	374	(0)	806227
1228	27.5	9.8	3.6	chr12	18107914	18108258	(115167051)	+	MLT1D	LTR/ERVL-MaLR	129	504	(1)	806226
2356	9.9	0.0	0.7	chr12	18226010	18226313	(115048996)	+	AluSz	SINE/Alu	1	302	(10)	806372
238	28.0	2.5	4.8	chr12	18226489	18226612	(115048697)	C	L1ME3Cz	LINE/L1	(15)	982	862	806373
1063	32.4	9.5	5.9	chr12	18361749	18362610	(114912699)	C	L1MB1	LINE/L1	(5225)	1340	675	806541
7945	7.2	0.6	0.3	chr12	22676014	22677908	(110597401)	C	L1PA7	LINE/L1	(4)	6150	4255	812516
384	31.3	3.2	2.2	chr12	22678232	22678414	(110596895)	+	L2	LINE/L2	1907	2091	(1328)	812517
502	23.0	24.8	0.0	chr12	25197858	25198087	(108077222)	+	HAL1	LINE/L1	13	318	(2189)	816120
898	25.1	8.0	3.0	chr12	25198118	25198545	(108076764)	+	HAL1	LINE/L1	407	908	(1599)	816120
3059	19.2	3.4	2.3	chr12	25890299	25890905	(107384404)	C	MER6	DNA/TcMar-Tigger	(232)	633	20	817154
2258	26.0	9.7	4.9	chr12	26854470	26854778	(106420531)	+	L2	LINE/L2	630	946	(2473)	818587
33	0.0	3.6	6.9	chr12	26854779	26854834	(106420475)	+	(TTCT)n	Simple_repeat	1	58	(0)	818588
27	3.1	0.0	2.9	chr12	26854835	26854869	(106420440)	+	(TTCC)n	Simple_repeat	1	35	(0)	818589
1624	20.3	0.3	1.0	chr12	26854872	26855162	(106420147)	C	AluJo	SINE/Alu	(23)	289	1	818590
1016	19.8	0.0	0.0	chr12	27237836	27237992	(106037317)	+	FAM	SINE/Alu	1	157	(28)	819245
14	0.0	0.0	0.0	chr12	27237998	27238015	(106037294)	+	(CAA)n	Simple_repeat	1	18	(0)	819246
388	28.0	7.4	1.7	chr12	27238483	27238660	(106036649)	+	L1M5	LINE/L1	5471	5659	(465)	819247
407	25.7	15.3	1.4	chr12	27390993	27391061	(105884248)	C	MIR	SINE/MIR	(12)	250	165	819481
3787	11.2	6.7	1.2	chr12	27391062	27391665	(105883644)	C	L1PA16	LINE/L1	(1)	6165	5526	819482
2475	8.6	0.7	0.7	chr12	31309665	31309966	(101965343)	C	AluSp	SINE/Alu	(11)	302	1	824988
10056	26.2	5.3	3.6	chr12	31309967	31310870	(101964439)	C	PRIMA4-int	LTR/ERV1	(5251)	3019	2050	824985
14227	8.9	2.5	1.8	chr12	31540701	31542005	(101733304)	+	L1MA3	LINE/L1	6060	7368	(356)	825473
23468	7.8	3.7	2.1	chr12	31941788	31942541	(101332768)	C	HERV4_I-int	LTR/ERV1	(3513)	3026	2214	826417
2363	11.2	0.3	0.0	chr12	31942542	31942853	(101332456)	C	AluSp	SINE/Alu	(0)	313	1	826428
2269	15.6	2.1	6.6	chr12	31976692	31976898	(101298411)	C	Tigger2a	DNA/TcMar-Tigger	(242)	192	1	826497
1195	24.8	12.2	4.1	chr12	31976899	31977190	(101298119)	C	L1ME3B	LINE/L1	(786)	5360	5049	826496
2182	9.5	0.0	2.0	chr12	31977191	31977486	(101297823)	C	AluSq	SINE/Alu	(23)	290	1	826499
1195	24.8	12.2	4.1	chr12	31977487	31977693	(101297616)	C	L1ME3B	LINE/L1	(1098)	5048	4812	826496
1450	17.2	2.5	0.4	chr12	39398944	39399175	(93876134)	+	AluJb	SINE/Alu	3	239	(73)	832365
1364	19.5	1.8	9.0	chr12	39399176	39399407	(93875902)	+	MER2	DNA/TcMar-Tigger	129	340	(5)	832364
759	16.2	9.8	0.7	chr12	39399627	39399775	(93875534)	+	LTR102_Mam	LTR/ERVL	362	525	(326)	832363
768	18.2	0.7	0.0	chr12	40017389	40017531	(93257778)	+	MER92D	LTR/ERV1	177	320	(0)	833183
3139	19.1	1.2	0.4	chr12	43892058	43892614	(89382695)	C	MER68	LTR/ERVL	(1)	562	1	838730
1326	27.1	9.6	2.4	chr12	43892664	43893364	(89381945)	C	L2a	LINE/L2	(8)	3418	2659	838731
485	36.3	1.4	0.0	chr12	45232238	45232383	(88042926)	C	L2b	LINE/L2	(0)	3375	3228	840541
1749	18.1	2.7	0.3	chr12	45716438	45716730	(87558579)	C	AluJr	SINE/Alu	(12)	300	1	841268
2653	34.9	5.1	4.1	chr12	46090550	46093142	(87182167)	+	PABL_B-int	LTR/ERV1	925	4234	(3522)	841819
344	29.6	15.2	3.9	chr12	46554813	46555044	(86720265)	C	L2c	LINE/L2	(11)	3376	3114	842434
403	24.5	8.9	5.9	chr12	47303276	47303427	(85971882)	C	MIRc	SINE/MIR	(31)	237	81	843475
977	19.1	0.6	4.2	chr12	47303534	47303701	(85971608)	C	AluJr	SINE/Alu	(149)	163	2	843476
578	30.6	12.1	1.2	chr12	47303706	47303963	(85971346)	+	L2a	LINE/L2	2926	3215	(211)	843477
1532	29.7	14.2	5.1	chr12	47367675	47369515	(85905794)	C	L2a	LINE/L2	(72)	3354	1307	843611
186	38.0	7.1	0.0	chr12	47804362	47804453	(85470856)	C	MIR3	SINE/MIR	(85)	123	25	844220
1300	16.3	2.4	4.8	chr12	51977608	51977859	(81297450)	C	AluJb	SINE/Alu	(4)	308	63	852253
257	26.5	11.3	2.9	chr12	53322650	53322754	(79952555)	C	MIR	SINE/MIR	(42)	220	106	854481
1511	14.7	8.2	0.8	chr12	53322804	53323062	(79952247)	+	AluJo	SINE/Alu	1	280	(32)	854482
2346	9.4	0.0	0.0	chr12	53360944	53361231	(79914078)	+	AluSc	SINE/Alu	17	304	(5)	854575
2174	10.3	0.3	0.0	chr12	53361238	53361527	(79913782)	+	AluSx4	SINE/Alu	5	295	(15)	854576
15	21.4	0.0	0.0	chr12	53371585	53371622	(79903687)	+	(TCCCC)n	Simple_repeat	1	38	(0)	854610
13	16.7	4.8	2.3	chr12	53371725	53371766	(79903543)	+	(ACTCTGG)n	Simple_repeat	1	44	(0)	854611
2203	11.4	0.0	0.0	chr12	53371850	53372146	(79903163)	+	AluSz	SINE/Alu	1	297	(15)	854612
263	25.0	6.2	6.2	chr12	56131809	56131936	(77143373)	C	L2b	LINE/L2	(14)	3361	3234	858948
1136	14.1	0.0	0.0	chr12	56532922	56533106	(76742203)	C	AluJb	SINE/Alu	(0)	312	129	859735
1979	14.4	0.0	0.3	chr12	56533110	56533401	(76741908)	C	AluJr4	SINE/Alu	(21)	291	1	859736
2055	13.9	0.0	0.0	chr12	56533409	56533714	(76741595)	C	AluSz	SINE/Alu	(0)	312	2	859737
1437	22.6	9.4	0.6	chr12	62841251	62841561	(70433748)	+	MER58B	DNA/hAT-Charlie	1	341	(0)	868562
361	22.1	3.8	0.0	chr12	62841568	62841644	(70433665)	C	MADE2	DNA/TcMar-Mariner	(0)	80	1	868563
236	33.0	6.8	1.8	chr12	63015671	63015781	(70259528)	C	L2b	LINE/L2	(2)	3373	3257	868840
1731	18.5	0.0	5.2	chr12	63015871	63016194	(70259115)	C	AluJb	SINE/Alu	(5)	307	1	868841
4737	32.1	5.2	4.7	chr12	63401900	63405521	(69869788)	C	PRIMA4-int	LTR/ERV1	(2029)	6241	2154	869364
16	23.5	0.0	0.0	chr12	63405522	63405557	(69869752)	+	(T)n	Simple_repeat	1	36	(0)	869365
6715	14.8	3.2	3.2	chr12	64227185	64227588	(69047721)	C	L1MA9	LINE/L1	(1456)	4684	4258	870694
46	6.4	3.0	0.0	chr12	64227589	64227655	(69047654)	+	(TTTC)n	Simple_repeat	1	69	(0)	870697
6715	14.8	3.2	3.2	chr12	64227656	64227680	(69047629)	C	L1MA9	LINE/L1	(1883)	4257	4238	870694
1992	19.7	0.3	0.0	chr12	64227681	64227985	(69047324)	C	AluJo	SINE/Alu	(4)	308	3	870698
6715	14.8	3.2	3.2	chr12	64227986	64228086	(69047223)	C	L1MA9	LINE/L1	(1903)	4237	4130	870694
2282	14.9	9.3	1.6	chr12	64228085	64228528	(69046781)	C	L1MA9	LINE/L1	(2158)	3982	3501	870694
1336	18.7	6.0	0.4	chr12	64727451	64727733	(68547576)	+	L1MB8	LINE/L1	5699	5995	(183)	871702
556	12.9	14.5	12.5	chr12	64727811	64727926	(68547383)	+	L1MB8	LINE/L1	6007	6123	(55)	871702
12	24.0	4.8	3.1	chr12	65170235	65170296	(68105013)	+	G-rich	Low_complexity	1	65	(0)	872394
228	31.0	0.0	1.4	chr12	65432745	65432816	(67842493)	+	MamSINE1	SINE/tRNA-RTE	8	78	(212)	872776
28	31.4	3.1	2.2	chr12	66496803	66496932	(66778377)	+	G-rich	Low_complexity	1	134	(0)	874458
376	30.7	2.6	1.3	chr12	67910942	67911093	(65364216)	C	Eulor2A	DNA?	(147)	161	8	876584
36143	6.3	1.9	0.8	chr12	68540690	68547511	(64727798)	+	Harlequin-int	LTR/ERV1	1	6895	(1)	877578
2458	15.3	7.1	0.8	chr12	68919891	68920285	(64355024)	+	MSTB	LTR/ERVL-MaLR	5	426	(0)	878349
262	32.7	13.4	3.0	chr12	72403123	72403289	(60872020)	C	L2b	LINE/L2	(85)	3290	3104	883796
3846	26.0	7.2	3.3	chr12	75343998	75345378	(57929931)	C	L1MEc	LINE/L1	(4888)	1512	75	887428
2232	29.5	3.6	7.5	chr12	75698579	75699717	(57575592)	+	L1ME3B	LINE/L1	399	1491	(4924)	887940
1623	21.2	2.2	4.8	chr12	75699761	75700132	(57575177)	+	MLT1A	LTR/ERVL-MaLR	9	370	(4)	887941
353	27.1	13.0	4.2	chr12	76065270	76065458	(57209851)	+	L1MEd	LINE/L1	4013	4220	(1926)	888546
258	21.1	11.8	3.4	chr12	76065495	76065671	(57209638)	+	L1M1	LINE/L1	4276	4469	(1677)	888550
544	31.2	13.6	2.0	chr12	76065710	76066052	(57209257)	+	L1MEd	LINE/L1	4530	4918	(1228)	888546
1486	9.2	2.2	1.4	chr12	76935447	76935667	(56339642)	C	L1PA10	LINE/L1	(4)	6164	5942	890112
332	29.7	7.1	2.5	chr12	76935989	76936109	(56339200)	C	L2b	LINE/L2	(11)	3364	3238	890113
22	0.0	0.0	0.0	chr12	76936204	76936227	(56339082)	+	(A)n	Simple_repeat	1	24	(0)	890114
21	9.2	0.0	2.7	chr12	76936263	76936299	(56339010)	+	(GAAG)n	Simple_repeat	1	37	(0)	890115
1752	11.4	6.1	4.5	chr12	78338381	78338669	(54936640)	+	AluSx3	SINE/Alu	1	294	(17)	892011
15	4.1	4.0	0.0	chr12	78338774	78338798	(54936511)	+	(AATC)n	Simple_repeat	1	26	(0)	892012
347	31.8	9.1	4.0	chr12	82835354	82835602	(50439707)	C	L3	LINE/CR1	(607)	3492	3230	898322
6274	7.8	1.0	3.3	chr12	83115652	83115782	(50159527)	C	L1PB1	LINE/L1	(0)	6867	6740	898703
26	0.0	0.0	0.0	chr12	83115783	83115807	(50159502)	+	(TGT)n	Simple_repeat	1	25	(0)	898704
1646	14.3	1.2	0.0	chr12	83115808	83116045	(50159264)	C	AluSg	SINE/Alu	(29)	281	41	898705
20896	8.1	1.8	5.3	chr12	83116046	83117896	(50157413)	C	L1PB1	LINE/L1	(128)	6739	5107	898703
424	30.5	4.3	2.5	chr12	89116880	89117037	(44158272)	+	MIR	SINE/MIR	80	240	(22)	906501
13	3.6	6.2	5.9	chr12	91512708	91512739	(41762570)	+	A-rich	Low_complexity	1	34	(0)	910047
2117	14.7	0.0	0.3	chr12	93484612	93484897	(39790412)	C	AluSx	SINE/Alu	(27)	285	1	913553
18	4.1	0.0	0.0	chr12	93484962	93484979	(39790330)	+	(AC)n	Simple_repeat	1	18	(0)	913554
57	0.0	0.0	0.0	chr12	93484980	93485028	(39790281)	+	(AT)n	Simple_repeat	1	49	(0)	913555
717	19.0	0.0	3.3	chr12	93485032	93485152	(39790157)	C	AluJo	SINE/Alu	(195)	117	1	913556
1699	16.0	7.7	1.8	chr12	93485162	93485442	(39789867)	C	AluJb	SINE/Alu	(13)	299	1	913557
2247	14.5	5.6	5.3	chr12	94058973	94059403	(39215906)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	914596
300	25.4	2.7	2.7	chr12	94336056	94336128	(38939181)	C	MIRc	SINE/MIR	(14)	254	182	915042
2037	13.2	9.0	0.6	chr12	96053266	96053599	(37221710)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	918331
389	32.2	1.4	0.0	chr12	96053791	96053933	(37221376)	C	MLT1F	LTR/ERVL-MaLR	(402)	146	2	918332
25	29.9	0.0	0.0	chr12	96358371	96358443	(36916866)	+	GA-rich	Low_complexity	1	73	(0)	918903
2079	11.2	0.3	1.8	chr12	96358541	96358826	(36916483)	+	AluSx	SINE/Alu	1	282	(30)	918904
32	0.0	0.0	0.0	chr12	96358836	96358865	(36916444)	+	(CCCCA)n	Simple_repeat	1	30	(0)	918905
237	16.7	18.8	0.0	chr12	96953719	96953796	(36321513)	+	L1MEc	LINE/L1	48	143	(6257)	919940
1936	21.6	15.4	1.4	chr12	96953802	96954630	(36320679)	+	L1MEc	LINE/L1	1396	2336	(4064)	919940
16142	14.6	2.1	0.8	chr12	98421137	98423628	(34851681)	+	HERVL18-int	LTR/ERVL	3524	6047	(0)	922179
2547	8.8	0.9	0.0	chr12	98423630	98423971	(34851338)	+	LTR18C	LTR/ERVL	1	345	(0)	922179
1870	15.0	0.0	8.3	chr12	98527216	98527542	(34747767)	+	AluJb	SINE/Alu	1	300	(12)	922426
286	32.7	12.9	1.9	chr12	99143933	99144138	(34131171)	+	MIRb	SINE/MIR	37	268	(0)	923479
312	20.9	13.5	0.8	chr12	102816768	102816891	(30458418)	C	MIRc	SINE/MIR	(69)	161	7	929681
1582	24.6	15.3	1.8	chr12	102817060	102817833	(30457476)	C	Charlie2b	DNA/hAT-Charlie	(2)	2780	1884	929682
1801	16.1	2.1	0.0	chr12	104406529	104406802	(28868507)	C	AluJr	SINE/Alu	(30)	282	3	932501
806	30.6	4.1	1.1	chr12	104406808	104407183	(28868126)	C	L2a	LINE/L2	(13)	3413	3026	932502
2304	13.6	0.3	1.4	chr12	104542172	104542537	(28732772)	+	L1MB3	LINE/L1	5561	5922	(261)	932794
332	26.7	0.9	1.9	chr12	104542686	104542792	(28732517)	+	L1ME4b	LINE/L1	783	888	(4)	932795
2677	14.3	1.6	0.2	chr12	104542961	104543380	(28731929)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	932796
1583	25.0	3.2	6.9	chr12	105000633	105001484	(28273825)	C	MER57A-int	LTR/ERV1	(1579)	4608	3920	933646
12	18.4	0.0	9.6	chr12	105001849	105001900	(28273409)	+	(TTTTC)n	Simple_repeat	1	52	(0)	933647
4479	13.4	5.6	4.2	chr12	107700210	107700904	(25574405)	C	L1MB3	LINE/L1	(40)	6143	5414	938729
638	19.4	2.4	2.4	chr12	107700905	107701028	(25574281)	C	FLAM_A	SINE/Alu	(18)	124	1	938731
4479	13.4	5.6	4.2	chr12	107701029	107701135	(25574174)	C	L1MB3	LINE/L1	(770)	5413	5323	938729
1013	16.1	0.0	0.7	chr12	107701137	107701291	(25574018)	C	AluJb	SINE/Alu	(22)	290	137	938732
211	25.0	3.2	0.0	chr12	109671276	109671335	(23603974)	C	L2b	LINE/L2	(21)	3354	3293	943026
975	26.7	18.9	3.8	chr12	109671417	109671782	(23603527)	+	MLT1F2	LTR/ERVL-MaLR	127	560	(0)	943027
1188	16.9	2.6	6.3	chr12	110215423	110215687	(23059622)	C	AluJo	SINE/Alu	(0)	312	85	944271
270	25.9	9.1	2.3	chr12	110215691	110215864	(23059445)	+	Charlie30a	DNA/hAT-Charlie	480	666	(125)	944272
1280	15.4	0.0	10.8	chr12	110635375	110635660	(22639649)	+	AluJr	SINE/Alu	44	298	(14)	945186
15	16.3	2.9	0.0	chr12	110635794	110635828	(22639481)	+	(CCTCTC)n	Simple_repeat	1	36	(0)	945187
205	31.8	2.7	2.7	chr12	110636039	110636148	(22639161)	C	L2	LINE/L2	(654)	2765	2656	945188
2054	11.4	3.4	0.0	chr12	111765388	111765668	(21509641)	+	AluSq	SINE/Alu	3	293	(20)	947848
432	27.8	14.6	3.5	chr12	111765755	111765985	(21509324)	+	MLT1J1	LTR/ERVL-MaLR	18	278	(166)	947849
2584	5.6	0.0	0.0	chr12	111765989	111766294	(21509015)	+	AluY	SINE/Alu	2	307	(4)	947850
210	26.3	8.5	9.9	chr12	115193052	115193182	(18082127)	C	L2b	LINE/L2	(6)	3420	3271	955490
259	29.9	1.3	0.0	chr12	115193273	115193349	(18081960)	+	MamRep1894	DNA/hAT	2	79	(44)	955491
1418	24.1	9.6	4.2	chr12	115193481	115193883	(18081426)	+	MER57C2	LTR/ERV1	8	434	(0)	955492
434	35.3	3.0	4.4	chr12	115846556	115846899	(17428410)	+	L2b	LINE/L2	3014	3352	(23)	956910
2147	11.7	0.3	1.9	chr12	115847048	115847356	(17427953)	C	AluSx	SINE/Alu	(0)	312	9	956911
2005	12.4	0.7	0.7	chr12	116234248	116234529	(17040780)	C	AluSx1	SINE/Alu	(30)	282	1	957561
1760	18.4	0.3	1.6	chr12	116234658	116234962	(17040347)	C	AluSz	SINE/Alu	(11)	301	1	957562
418	17.3	14.8	0.9	chr12	116880613	116880717	(16394592)	+	MamRep1879	DNA/hAT-Tip100?	77	198	(18)	959182
1757	10.7	1.3	0.0	chr12	117906385	117906618	(15368691)	+	AluSq2	SINE/Alu	59	295	(18)	961363
435	30.1	5.5	2.1	chr12	117906673	117906699	(15368610)	C	MIRb	SINE/MIR	(62)	206	177	961364
422	22.8	23.3	2.0	chr12	117906700	117906763	(15368546)	C	MER5A	DNA/hAT-Charlie	(0)	189	125	961365
1634	11.5	10.1	0.8	chr12	117906764	117907023	(15368286)	+	AluJr	SINE/Alu	1	287	(25)	961366
55952	9.0	2.0	1.1	chr12	118483177	118486794	(14788515)	C	HERVFH19-int	LTR/ERV1	(2313)	5406	1842	962658
2022	10.4	3.9	2.0	chr12	119875704	119876002	(13399307)	+	AluSx1	SINE/Alu	2	306	(6)	965680
226	23.9	14.1	1.5	chr12	120465540	120465607	(12809702)	C	MIRb	SINE/MIR	(0)	268	191	967142
13	16.8	0.0	0.0	chr12	120465790	120465816	(12809493)	+	(AAC)n	Simple_repeat	1	27	(0)	967143
1779	10.6	5.6	0.8	chr12	121428198	121428452	(11846857)	C	AluSx	SINE/Alu	(14)	298	31	969369
2280	9.7	0.7	0.0	chr12	121540951	121541250	(11734059)	+	AluSp	SINE/Alu	1	302	(11)	969624
962	19.2	1.2	0.0	chr12	121541255	121541421	(11733888)	+	AluJo	SINE/Alu	140	308	(4)	969625
29	7.4	0.0	0.0	chr12	121541422	121541464	(11733845)	+	(GGAG)n	Simple_repeat	1	43	(0)	969626
1684	21.3	12.3	0.5	chr12	124026261	124026703	(9248606)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	975317
227	31.7	12.1	5.2	chr12	124026704	124026907	(9248402)	C	L2	LINE/L2	(831)	2588	2358	975316
1991	19.3	2.3	0.6	chr12	124026933	124027319	(9247990)	C	MLT2D	LTR/ERVL	(57)	498	1	975318
3303	18.4	1.7	3.4	chr12	124648832	124649443	(8625866)	+	MER77	LTR/ERVL	4	604	(0)	976489
952	24.9	4.7	2.8	chr12	124809016	124809303	(8466006)	+	L1MC4	LINE/L1	7739	8027	(15)	976876
881	15.2	0.0	0.8	chr12	124809304	124809435	(8465874)	+	FLAM_C	SINE/Alu	2	132	(11)	976877
269	34.6	15.2	3.8	chr12	129919600	129920876	(3354433)	+	L2c	LINE/L2	1931	3387	(0)	985856
774	22.8	2.3	0.0	chr12	130660011	130660181	(2615128)	C	AluJb	SINE/Alu	(14)	298	124	986997
28704	8.2	1.0	0.9	chr12	131335420	131340111	(1935198)	+	HERV9-int	LTR/ERV1	30	4833	(3603)	988009
81	24.9	3.9	1.1	chr12	132055517	132055772	(1219537)	+	(GT)n	Simple_repeat	1	266	(0)	989024
1231	27.6	12.4	2.7	chr12	132056325	132056413	(1218896)	+	L1MD	LINE/L1	4750	4842	(1304)	989025
30	3.0	2.9	0.0	chr12	132056414	132056447	(1218862)	+	(AC)n	Simple_repeat	1	35	(0)	989026
1824	26.3	13.5	2.3	chr12	132056448	132057521	(1217788)	+	L1ME1	LINE/L1	4841	6045	(134)	989027
2662	14.1	1.6	3.2	chr13	26936820	26937258	(87427070)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1004037
187	20.3	6.8	9.2	chr13	26937350	26937425	(87426903)	+	L2	LINE/L2	2846	2919	(500)	1004039
2012	12.5	0.7	0.0	chr13	27008159	27008438	(87355890)	+	AluSx	SINE/Alu	1	282	(30)	1004155
28	0.0	0.0	0.0	chr13	27008441	27008467	(87355861)	+	(AAAT)n	Simple_repeat	1	27	(0)	1004156
331	2.8	0.0	0.0	chr13	27008472	27008507	(87355821)	+	AluSx3	SINE/Alu	75	110	(201)	1004157
610	14.5	0.0	0.0	chr13	27008509	27008591	(87355737)	C	AluSz	SINE/Alu	(229)	83	1	1004158
1244	24.6	5.6	17.0	chr13	27008613	27008857	(87355471)	C	L1MC5a	LINE/L1	(765)	2012	1961	1004159
1402	23.2	3.0	1.5	chr13	27008858	27009190	(87355138)	C	MER58B	DNA/hAT-Charlie	(3)	338	1	1004160
42484	6.4	1.2	0.9	chr13	27213119	27219588	(87144740)	+	HERV9NC-int	LTR/ERV1	1	5374	(0)	1004530
239	28.6	10.4	3.5	chr13	27425696	27425811	(86938517)	C	MIRb	SINE/MIR	(125)	143	19	1004935
198	26.2	3.2	0.0	chr13	27426267	27426327	(86938001)	C	L2a	LINE/L2	(4)	3422	3360	1004936
766	19.9	0.8	0.0	chr13	28142336	28142466	(86221862)	C	FLAM_C	SINE/Alu	(11)	132	1	1006230
17	0.0	0.0	0.0	chr13	28142512	28142530	(86221798)	+	(T)n	Simple_repeat	1	19	(0)	1006231
641	17.5	0.0	2.5	chr13	28142537	28142656	(86221672)	C	AluJb	SINE/Alu	(145)	167	51	1006232
2468	17.3	9.8	1.3	chr13	28371274	28371742	(85992586)	+	Tigger7	DNA/TcMar-Tigger	2	514	(1977)	1006643
664	15.9	5.3	0.8	chr13	28371746	28371872	(85992456)	+	MER44C	DNA/TcMar-Tigger	592	724	(9)	1006644
350	23.9	19.8	0.0	chr13	28371885	28372014	(85992314)	+	L2a	LINE/L2	3265	3426	(0)	1006635
13	14.1	3.0	2.9	chr13	28755162	28755194	(85609134)	+	(CTC)n	Simple_repeat	1	34	(0)	1007291
795	25.7	10.3	5.4	chr13	29746050	29746617	(84617711)	+	L1MEj	LINE/L1	1018	1666	(755)	1008561
417	35.7	5.5	10.5	chr13	31971001	31971382	(82392946)	+	L2b	LINE/L2	3014	3375	(0)	1012091
415	32.5	9.2	2.1	chr13	33822180	33822736	(80541592)	+	L1M5	LINE/L1	4408	5006	(1134)	1014888
8636	20.8	2.7	2.9	chr13	34234494	34236553	(80127775)	C	L1PA8A	LINE/L1	(4296)	2057	2	1015506
425	27.4	4.6	0.0	chr13	34236551	34236736	(80127592)	C	L1MEf	LINE/L1	(4555)	2482	2288	1015504
1362	33.6	5.0	4.7	chr13	35145140	35147330	(79216998)	C	MER66-int	LTR/ERV1	(2677)	3862	1854	1016815
1739	14.4	2.3	2.9	chr13	35228381	35228687	(79135641)	C	L1PB4	LINE/L1	(0)	6156	5852	1016920
207	29.6	9.3	0.0	chr13	35743551	35743638	(78620690)	C	L2c	LINE/L2	(39)	3348	3252	1017593
1305	19.9	2.6	3.0	chr13	35743660	35743834	(78620494)	+	MER4D	LTR/ERV1	25	199	(724)	1017594
4322	7.7	0.9	0.2	chr13	35743835	35744384	(78619944)	C	MER41A	LTR/ERV1	(0)	554	1	1017595
4288	12.7	0.7	0.0	chr13	35857075	35857672	(78506656)	+	LTR43	LTR/ERV1	1	602	(0)	1017720
347	33.6	3.7	9.4	chr13	35857906	35858332	(78505996)	C	L2	LINE/L2	(452)	2967	2566	1017721
14	10.0	6.2	0.0	chr13	37000762	37000793	(77363535)	+	(GCGCAG)n	Simple_repeat	1	34	(0)	1019397
1825	17.0	1.7	0.7	chr13	37004834	37005127	(77359201)	+	AluJo	SINE/Alu	1	297	(15)	1019405
1613	19.9	1.9	5.4	chr13	38778194	38778581	(75585747)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	1021730
1343	13.8	0.9	0.0	chr13	38778586	38778810	(75585518)	+	L1PA13	LINE/L1	5934	6160	(3)	1021731
2304	7.1	0.0	1.3	chr13	38779096	38779408	(75584920)	+	L1PA8	LINE/L1	5861	6169	(3)	1021732
17622	14.3	2.3	1.4	chr13	44173005	44175838	(70188490)	C	L1M1	LINE/L1	(4692)	2873	13	1029879
243	36.2	13.8	2.2	chr13	45210706	45211024	(69153304)	C	L2a	LINE/L2	(450)	2969	2608	1031796
2024	14.5	4.7	1.4	chr13	45398124	45398472	(68965856)	+	L1PA17	LINE/L1	5806	6166	(0)	1032206
12	20.3	0.0	6.7	chr13	50513755	50513799	(63850529)	+	A-rich	Low_complexity	1	45	(0)	1040243
463	26.4	2.0	1.4	chr13	51803255	51803400	(62560928)	+	MER5B	DNA/hAT-Charlie	29	175	(3)	1042118
295	25.3	9.6	4.5	chr13	52026105	52026282	(62338046)	C	L2c	LINE/L2	(155)	3232	3045	1042447
290	30.6	17.2	3.0	chr13	53281860	53281894	(61082434)	C	MIR	SINE/MIR	(26)	236	202	1044426
1787	19.2	0.6	2.5	chr13	53281896	53281910	(61082418)	C	AluJo	SINE/Alu	(0)	312	298	1044427
102	0.0	1.1	0.0	chr13	53281911	53282003	(61082325)	+	(CCCTT)n	Simple_repeat	1	94	(0)	1044428
824	29.6	7.1	4.5	chr13	57257489	57257937	(57106391)	+	ERV24_Prim-int	LTR/ERV1	2126	2587	(4988)	1049327
8671	13.5	1.5	0.8	chr13	63602677	63604134	(50760194)	+	L1PREC2	LINE/L1	2770	4238	(1908)	1057495
3058	20.3	3.3	7.3	chr13	63611674	63612470	(50751858)	C	L1MA7	LINE/L1	(10)	6281	5518	1057504
370	27.8	4.1	1.8	chr13	64417503	64417667	(49946661)	C	Tigger1	DNA/TcMar-Tigger	(1316)	1102	934	1058488
333	31.4	6.4	8.3	chr13	64417907	64418319	(49946009)	+	L1MC5a	LINE/L1	1546	1768	(1009)	1058489
2800	24.7	2.3	3.6	chr13	67905713	67906703	(46457625)	+	L1MB3	LINE/L1	5678	6684	(359)	1062843
2140	12.6	0.3	1.9	chr13	67906704	67907020	(46457308)	+	AluSx	SINE/Alu	1	312	(0)	1062856
261	32.0	5.5	1.0	chr13	71828301	71828438	(42535890)	+	MIRc	SINE/MIR	15	155	(53)	1067975
316	35.5	2.4	0.0	chr13	73511023	73511143	(40853185)	C	L2a	LINE/L2	(0)	3426	3303	1070665
773	22.3	11.4	7.1	chr13	73958051	73958234	(40406094)	+	MER33	DNA/hAT-Charlie	1	207	(117)	1071306
1226	29.8	7.2	5.3	chr13	74119361	74120199	(40244129)	+	L1MEf	LINE/L1	760	1633	(4609)	1071534
2129	12.7	1.3	0.0	chr13	74120200	74120498	(40243830)	+	AluSx1	SINE/Alu	1	303	(9)	1071536
1934	15.1	2.4	0.3	chr13	75470710	75471000	(38893328)	+	AluSx	SINE/Alu	1	297	(15)	1073392
204	36.9	11.2	6.5	chr13	77235085	77235518	(37128810)	C	L2c	LINE/L2	(4)	3383	2927	1075878
15	13.9	0.0	0.0	chr13	77326375	77326398	(37037930)	+	(AC)n	Simple_repeat	1	24	(0)	1076031
26	0.0	0.0	0.0	chr13	77326779	77326803	(37037525)	+	(CGC)n	Simple_repeat	1	25	(0)	1076032
20	13.0	0.0	0.0	chr13	77326918	77326952	(37037376)	+	(CCT)n	Simple_repeat	1	35	(0)	1076033
19	24.8	0.0	0.0	chr13	77327025	77327070	(37037258)	+	(GCC)n	Simple_repeat	1	46	(0)	1076034
535	27.3	14.6	4.7	chr13	77890834	77891328	(36473000)	C	HAL1	LINE/L1	(226)	2281	1729	1076814
379	18.0	0.8	10.3	chr13	77891368	77891503	(36472825)	C	HAL1	LINE/L1	(1374)	1133	1011	1076814
499	30.8	13.4	8.0	chr13	77891652	77892317	(36472011)	C	HAL1	LINE/L1	(1792)	715	8	1076814
1126	27.2	16.9	6.5	chr13	78951578	78952378	(35411950)	C	HAL1	LINE/L1	(108)	2399	1450	1078241
480	3.5	0.0	0.0	chr13	81434869	81434926	(32929402)	C	L1PA3	LINE/L1	(14)	6141	6084	1081556
2357	10.6	0.0	1.0	chr13	83636816	83637127	(30727201)	+	AluSc5	SINE/Alu	1	309	(0)	1084219
1266	18.4	10.8	4.7	chr13	83637399	83637676	(30726652)	+	AluJr	SINE/Alu	1	297	(15)	1084220
5632	6.6	0.1	0.3	chr13	85615457	85616188	(28748140)	C	L1PA7	LINE/L1	(2)	6152	5422	1086777
1393	24.8	6.2	4.7	chr13	85616189	85616417	(28747911)	C	MLT1D	LTR/ERVL-MaLR	(278)	227	1	1086776
354	28.3	9.9	2.3	chr13	85702294	85702423	(28661905)	+	MLT1J1	LTR/ERVL-MaLR	1	141	(303)	1086888
8840	10.6	2.0	1.3	chr13	89559501	89561653	(24802675)	+	L1PREC2	LINE/L1	4000	6158	(2)	1091767
2311	14.9	0.3	0.6	chr13	91071461	91071825	(23292503)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1093731
1747	24.7	6.5	6.9	chr13	91071874	91072381	(23291947)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	64	1093732
343	32.6	3.9	3.4	chr13	94208410	94208568	(20155760)	C	L2c	LINE/L2	(188)	3187	3030	1097964
14	14.9	5.4	0.0	chr13	94208601	94208637	(20155691)	+	(TTTTCC)n	Simple_repeat	1	39	(0)	1097966
1385	16.2	6.1	7.6	chr13	94208641	94208942	(20155386)	+	AluJr	SINE/Alu	2	298	(14)	1097967
12	14.7	3.3	0.0	chr13	94704869	94704898	(19659430)	+	G-rich	Low_complexity	1	31	(0)	1098769
5856	8.1	0.8	0.4	chr13	96115272	96116065	(18248263)	C	L1PA8A	LINE/L1	(0)	6131	5335	1101129
260	35.2	11.5	1.8	chr13	96116279	96116498	(18247830)	C	MLT1M	LTR/ERVL-MaLR	(407)	265	22	1101130
339	5.4	6.7	0.0	chr13	96994694	96994749	(17369579)	C	Alu	SINE/Alu	(1)	300	241	1102344
2264	11.3	5.9	1.2	chr13	97917867	97918189	(16446139)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	1103699
36586	18.1	1.9	2.4	chr13	98760718	98764337	(15599991)	+	HERV3-int	LTR/ERV1	2	3554	(4872)	1105201
3298	16.0	10.5	0.8	chr13	99450729	99451363	(14912965)	+	MER39	LTR/ERV1	4	707	(0)	1106268
208	32.0	1.3	0.0	chr13	99451457	99451531	(14912797)	+	MIRb	SINE/MIR	118	193	(75)	1106269
6853	5.6	0.9	0.0	chr13	99491433	99492301	(14872027)	+	L1PA8	LINE/L1	5307	6172	(0)	1106350
16023	13.4	2.5	4.3	chr13	99492303	99494263	(14870065)	C	HERV4_I-int	LTR/ERV1	(3824)	2715	758	1106349
578	25.7	8.8	3.7	chr13	100609083	100609296	(13755032)	+	MER113	DNA/hAT-Charlie	87	312	(209)	1108215
2212	11.3	5.0	3.5	chr13	110866186	110866560	(3497768)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1121879
600	22.2	3.0	4.1	chr13	110866585	110866753	(3497575)	C	MIR	SINE/MIR	(63)	199	33	1121880
17	12.7	0.0	0.0	chr13	112588396	112588421	(1775907)	+	(GT)n	Simple_repeat	1	26	(0)	1123662
12	26.9	3.6	1.8	chr13	112588565	112588619	(1775709)	+	(GCCCG)n	Simple_repeat	1	57	(0)	1123663
517	33.2	0.9	0.9	chr14	20741146	20741361	(86302357)	+	PABL_B-int	LTR/ERV1	1445	1660	(5462)	1128523
2405	6.4	0.3	1.4	chr14	21489585	21489880	(85553838)	C	AluY	SINE/Alu	(18)	293	1	1129841
16	14.9	0.0	2.4	chr14	21489885	21489899	(85553819)	+	(TAA)n	Simple_repeat	1	14	(0)	1129842
1746	15.2	4.1	0.3	chr14	21489900	21490181	(85553537)	+	AluJo	SINE/Alu	1	293	(19)	1129843
16	14.9	0.0	2.4	chr14	21490182	21490195	(85553523)	+	(TAA)n	Simple_repeat	3	16	(0)	1129844
2110	9.1	1.4	1.1	chr14	21490196	21490481	(85553237)	+	AluSc8	SINE/Alu	1	287	(24)	1129845
244	35.4	0.0	0.0	chr14	21510164	21510245	(85533473)	+	L2c	LINE/L2	3289	3370	(17)	1129887
193	35.6	11.2	4.4	chr14	21510239	21510420	(85533298)	+	L3b	LINE/CR1	4912	5107	(125)	1129888
13	23.3	3.9	1.9	chr14	21655904	21655955	(85387763)	+	A-rich	Low_complexity	1	54	(0)	1130205
841	14.5	0.0	0.8	chr14	21655997	21656121	(85387597)	+	AluJb	SINE/Alu	2	125	(187)	1130206
23	23.6	0.0	0.0	chr14	21656122	21656186	(85387532)	+	A-rich	Low_complexity	1	65	(0)	1130207
1054	15.8	0.6	1.2	chr14	21656194	21656359	(85387359)	+	AluJb	SINE/Alu	118	282	(30)	1130206
7691	11.4	0.8	0.2	chr14	25104320	25105490	(81938228)	+	L1PA7	LINE/L1	56	1234	(5227)	1135101
259	25.4	13.3	2.3	chr14	32285815	32285947	(74757771)	+	L3	LINE/CR1	3210	3359	(740)	1144919
670	21.3	5.2	4.2	chr14	32285952	32286240	(74757478)	C	MLT2F	LTR/ERVL	(327)	336	7	1144920
326	29.4	17.8	3.2	chr14	32286320	32286505	(74757213)	C	MLT1L	LTR/ERVL-MaLR	(81)	461	243	1144921
237	28.5	27.4	0.0	chr14	32384493	32384622	(74659096)	C	MIR3	SINE/MIR	(1)	207	29	1145085
2172	11.6	0.7	0.0	chr14	34485396	34485688	(72558030)	C	AluSz	SINE/Alu	(17)	295	1	1147887
2319	9.5	0.3	4.1	chr14	35095558	35095873	(71947845)	+	AluSx3	SINE/Alu	1	304	(7)	1149348
413	21.9	11.8	2.5	chr14	35095923	35096044	(71947674)	+	Tigger15a	DNA/TcMar-Tigger	438	572	(143)	1149349
1629	14.1	4.1	8.5	chr14	35096060	35096364	(71947354)	+	AluJo	SINE/Alu	2	292	(20)	1149350
333	32.0	5.3	8.7	chr14	35426731	35426763	(71616955)	C	L1MD2	LINE/L1	(648)	5655	5637	1150003
757	28.4	10.2	0.7	chr14	35427157	35427447	(71616271)	C	L2a	LINE/L2	(0)	3426	3105	1150005
1421	32.8	15.0	4.9	chr14	35575442	35575592	(71468126)	C	L3	LINE/CR1	(8)	4091	3938	1150258
2429	8.6	0.3	0.0	chr14	35575593	35575893	(71467825)	C	AluSq2	SINE/Alu	(11)	302	1	1150259
32	22.8	1.2	2.3	chr14	37639917	37640001	(69403717)	+	(AT)n	Simple_repeat	1	86	(0)	1153215
2740	18.3	1.6	1.8	chr14	49942064	49942553	(57101165)	C	MLT1F	LTR/ERVL-MaLR	(57)	491	3	1168969
1527	22.6	6.9	3.0	chr14	50440795	50441563	(56602155)	+	L1MC4	LINE/L1	6682	7622	(420)	1169989
976	19.3	1.2	0.0	chr14	50441564	50441734	(56601984)	+	AluJo	SINE/Alu	120	292	(20)	1169990
65	0.0	0.0	0.0	chr14	50441744	50441798	(56601920)	+	(AC)n	Simple_repeat	1	55	(0)	1169991
295	31.2	7.3	2.0	chr14	50441989	50442107	(56601611)	C	MIRb	SINE/MIR	(119)	149	18	1169992
743	23.4	14.2	2.6	chr14	50442153	50442543	(56601175)	C	L1MC4	LINE/L1	(3)	8039	7596	1169993
346	29.8	4.1	4.5	chr14	51149467	51149733	(55893985)	+	ERV24B_Prim-int	LTR/ERV1	2317	2582	(4993)	1171037
1993	14.2	0.3	0.3	chr14	51149791	51150072	(55893646)	C	AluJr	SINE/Alu	(30)	282	1	1171038
2445	15.5	7.6	0.0	chr14	52245880	52246278	(54797440)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1172659
493	24.3	6.8	6.3	chr14	52258605	52258793	(54784925)	C	MLT2B2	LTR/ERVL	(87)	428	239	1172681
2360	10.9	0.0	0.0	chr14	54611595	54611905	(52431813)	+	AluSz	SINE/Alu	1	311	(1)	1176222
1947	30.7	8.4	2.6	chr14	54985074	54986140	(52057578)	C	L2a	LINE/L2	(0)	3426	2281	1176827
662	18.4	10.8	1.4	chr14	55255170	55255312	(51788406)	+	MER63A	DNA/hAT-Blackjack	3	160	(50)	1177358
567	20.5	0.8	2.3	chr14	55255397	55255526	(51788192)	C	MER5B	DNA/hAT-Charlie	(50)	128	1	1177359
313	29.7	5.1	2.4	chr14	55888269	55888406	(51155312)	+	LTR33A_	LTR/ERVL	22	161	(634)	1178470
13	26.3	0.0	4.1	chr14	55888409	55888457	(51155261)	+	(CAG)n	Simple_repeat	1	49	(0)	1178471
330	26.2	4.6	1.9	chr14	55888612	55888716	(51155002)	+	LTR33A_	LTR/ERVL	419	526	(5)	1178470
308	35.5	12.6	1.4	chr14	56000192	56000541	(51043177)	C	L2b	LINE/L2	(248)	3127	2709	1178636
209	29.5	3.3	1.1	chr14	56000521	56000609	(51043109)	+	L2a	LINE/L2	3336	3426	(0)	1178637
683	27.4	2.5	3.4	chr14	56096781	56096984	(50946734)	C	MIRb	SINE/MIR	(38)	230	29	1178787
49	0.0	0.0	0.0	chr14	56097293	56097334	(50946384)	+	(AC)n	Simple_repeat	1	42	(0)	1178788
2358	10.0	1.0	0.3	chr14	56768176	56768465	(50275253)	C	AluSx1	SINE/Alu	(20)	292	1	1179709
2593	8.1	0.0	0.0	chr14	60104039	60104347	(46939371)	+	AluSg	SINE/Alu	1	309	(1)	1184567
2250	13.1	3.3	2.8	chr14	60104513	60104874	(46938844)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1184568
233	30.6	7.2	3.2	chr14	61104892	61105077	(45938641)	+	L2a	LINE/L2	3225	3418	(8)	1185993
1376	25.2	2.0	5.2	chr14	61105222	61105664	(45938054)	C	MER39	LTR/ERV1	(18)	689	67	1185994
267	25.5	7.6	8.2	chr14	63390845	63391002	(43652716)	C	Tigger12c	DNA/TcMar-Tigger	(540)	194	38	1189142
491	31.2	5.2	8.8	chr14	63391199	63391394	(43652324)	+	MIRb	SINE/MIR	2	204	(64)	1189143
44	2.3	0.0	0.0	chr14	63391395	63391439	(43652279)	+	(GTTTT)n	Simple_repeat	1	45	(0)	1189144
262	31.9	4.1	1.1	chr14	64196337	64196431	(42847287)	+	L3b	LINE/CR1	5001	5098	(134)	1190831
1639	19.7	8.0	2.0	chr14	67244591	67244768	(39798950)	C	L1M5	LINE/L1	(410)	5769	5586	1195689
1592	18.5	13.3	3.7	chr14	67244769	67245223	(39798495)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	1195690
1639	19.7	8.0	2.0	chr14	67245224	67245500	(39798218)	C	L1M5	LINE/L1	(594)	5585	5284	1195689
1507	23.6	6.3	4.6	chr14	71296116	71296569	(35747149)	C	LTR16B	LTR/ERVL	(0)	463	2	1202573
645	21.6	3.9	2.9	chr14	71296570	71296774	(35746944)	C	HAL1M8	LINE/L1	(1029)	1962	1756	1202571
12118	18.1	4.7	3.0	chr14	71422335	71426478	(35617240)	C	L1MB3	LINE/L1	(38)	6643	2405	1202793
2045	18.6	5.2	4.4	chr14	72271644	72272143	(34771575)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	2	1204058
305	31.2	7.7	2.8	chr14	72272313	72272500	(34771218)	+	MIR3	SINE/MIR	7	201	(7)	1204059
2463	10.2	0.0	0.0	chr14	73085023	73085316	(33958402)	C	AluSc5	SINE/Alu	(15)	294	1	1205494
2255	24.0	12.6	11.3	chr14	73085317	73085445	(33958273)	C	L1MC5	LINE/L1	(781)	8523	8430	1205491
2131	14.3	0.0	1.3	chr14	73085446	73085745	(33957973)	C	AluSq2	SINE/Alu	(16)	297	2	1205495
2255	24.0	12.6	11.3	chr14	73085746	73086169	(33957549)	C	L1MC5	LINE/L1	(875)	8429	7994	1205491
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
1304	13.9	0.0	0.0	chr14	77589829	77589994	(29453724)	+	AluSz6	SINE/Alu	134	299	(13)	1214517
1895	18.0	0.0	0.7	chr14	77589995	77590277	(29453441)	C	AluJo	SINE/Alu	(31)	281	1	1214518
606	27.1	15.0	2.2	chr14	77590294	77590430	(29453288)	C	L2a	LINE/L2	(15)	3411	3269	1214519
557	27.8	7.0	2.5	chr14	90116629	90116831	(16926887)	C	LTR40a	LTR/ERVL	(126)	393	181	1233284
1361	20.6	1.4	2.4	chr14	90116832	90116882	(16926836)	C	L1MB5	LINE/L1	(0)	6174	6125	1233285
2526	18.3	5.5	2.6	chr14	90116883	90117307	(16926411)	C	MER44B	DNA/TcMar-Tigger	(0)	550	109	1233286
2337	9.2	0.0	0.7	chr14	90117308	90117601	(16926117)	+	AluSx	SINE/Alu	1	292	(20)	1233287
784	15.3	6.5	0.0	chr14	90897271	90897414	(16146304)	+	MLT1D	LTR/ERVL-MaLR	349	502	(3)	1234660
251	20.2	7.7	4.5	chr14	91032333	91032420	(16011298)	+	MLT1L	LTR/ERVL-MaLR	502	592	(18)	1234881
295	33.8	13.4	3.0	chr14	91032431	91032729	(16010989)	C	L2c	LINE/L2	(33)	3354	3020	1234882
1172	11.9	5.8	7.1	chr14	91454754	91454963	(15588755)	+	AluJo	SINE/Alu	76	282	(30)	1235714
1474	13.4	2.6	0.5	chr14	91454972	91455195	(15588523)	+	AluJb	SINE/Alu	84	312	(0)	1235715
239	25.9	0.0	0.0	chr14	92748911	92748964	(14294754)	C	MER5B	DNA/hAT-Charlie	(10)	168	115	1238155
913	25.7	5.1	2.2	chr14	92749018	92749477	(14294241)	+	LTR24	LTR/ERV1	56	530	(46)	1238156
312	26.1	3.3	1.1	chr14	92749483	92749571	(14294147)	C	MER5B	DNA/hAT-Charlie	(57)	121	31	1238155
1946	13.8	4.2	0.3	chr14	93632418	93632714	(13411004)	+	AluJb	SINE/Alu	1	309	(3)	1239763
3129	21.8	11.3	5.5	chr14	94064218	94065052	(12978666)	+	MER21C	LTR/ERVL	25	914	(24)	1240558
3433	18.5	0.9	2.4	chr14	94835734	94836404	(12207314)	+	L1MB5	LINE/L1	5514	6174	(0)	1241931
244	33.3	2.9	1.5	chr14	94836433	94836569	(12207149)	+	L2	LINE/L2	1838	1976	(1443)	1241932
2245	17.1	8.0	1.2	chr14	95698002	95698480	(11345238)	+	MER34	LTR/ERV1	29	542	(0)	1243544
313	27.2	3.5	2.1	chr14	95698510	95698675	(11345043)	+	L1P1	LINE/L1	4890	5052	(1094)	1243545
2468	6.1	0.3	0.0	chr14	97034407	97034703	(10009015)	C	AluSc8	SINE/Alu	(13)	298	1	1245952
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
319	26.5	10.5	4.9	chr14	100555508	100555650	(6488068)	C	MIRb	SINE/MIR	(73)	195	44	1252046
19	22.3	2.0	2.0	chr14	100555971	100556024	(6487694)	+	(TG)n	Simple_repeat	1	54	(0)	1252047
16	25.7	1.8	1.7	chr14	100556151	100556207	(6487511)	+	(CCTCC)n	Simple_repeat	1	58	(0)	1252048
563	23.5	3.5	0.0	chr14	100909693	100909828	(6133890)	+	MIR	SINE/MIR	13	153	(109)	1252557
615	24.9	13.4	3.4	chr14	100909830	100910091	(6133627)	+	L2a	LINE/L2	3121	3412	(14)	1252558
612	22.3	0.0	1.5	chr14	102983909	102984038	(4059680)	+	FLAM_A	SINE/Alu	1	128	(14)	1255992
241	28.6	9.8	4.0	chr14	102984269	102984392	(4059326)	C	MER5A1	DNA/hAT-Charlie	(4)	162	31	1255993
3201	25.0	7.1	7.0	chr14	105981942	105982977	(1060741)	C	HERVL32-int	LTR/ERVL	(738)	2680	1643	1260182
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
29	3.2	0.0	0.0	chr15	20345837	20345868	(81645321)	+	(GGAGCA)n	Simple_repeat	1	32	(0)	1263205
2128	22.2	5.3	6.3	chr15	29646156	29646789	(72344400)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	1	1275802
20	18.6	0.0	0.0	chr15	34428898	34428934	(67562255)	+	A-rich	Low_complexity	1	37	(0)	1282852
27	32.2	1.0	1.9	chr15	35857706	35857807	(66133382)	+	(TA)n	Simple_repeat	1	103	(0)	1284921
186	26.9	7.6	12.4	chr15	35857955	35858107	(66133082)	C	L3	LINE/CR1	(1402)	2697	2553	1284922
244	29.7	23.2	1.8	chr15	39777354	39777521	(62213668)	C	L3	LINE/CR1	(226)	3873	3659	1290153
574	27.5	3.0	4.9	chr15	40210302	40210504	(61780685)	C	HAL1	LINE/L1	(542)	1965	1767	1290863
1651	15.8	3.9	1.1	chr15	40210508	40210785	(61780404)	C	AluJr	SINE/Alu	(8)	304	19	1290864
1547	25.1	18.5	5.3	chr15	40210809	40211816	(61779373)	C	HAL1	LINE/L1	(1009)	1498	374	1290863
489	15.1	2.3	2.3	chr15	40591844	40591931	(61399258)	C	Charlie4a	DNA/hAT-Charlie	(0)	508	421	1291505
549	16.4	15.6	1.7	chr15	40591940	40592055	(61399134)	C	AluJr4	SINE/Alu	(177)	135	1	1291506
1452	19.9	9.2	5.7	chr15	40592056	40592177	(61399012)	C	Charlie4a	DNA/hAT-Charlie	(70)	438	325	1291505
369	24.6	7.1	0.0	chr15	42287352	42287469	(59703720)	+	MER94	DNA/hAT-Blackjack	5	131	(3)	1294857
225	28.6	1.4	0.0	chr15	43493339	43493408	(58497781)	C	Plat_L3	LINE/CR1	(0)	3586	3516	1297101
1963	15.1	0.3	1.3	chr15	45553218	45553516	(56437673)	C	AluJb	SINE/Alu	(16)	296	1	1300920
545	16.3	1.1	0.0	chr15	45553519	45553604	(56437585)	C	5S	rRNA	(4)	117	31	1300921
1727	10.6	6.9	0.4	chr15	45553802	45554046	(56437143)	+	AluSx1	SINE/Alu	37	298	(14)	1300922
970	18.1	1.1	5.7	chr15	55477784	55477976	(46513213)	+	AluSq10	SINE/Alu	2	185	(128)	1315638
3608	17.5	1.6	0.8	chr15	55477977	55478582	(46512607)	+	HERV4_I-int	LTR/ERV1	2434	3044	(3495)	1315639
3582	24.4	5.3	5.4	chr15	57172158	57172573	(44818616)	+	L1M5	LINE/L1	2403	2810	(3336)	1318266
1333	13.7	1.4	0.0	chr15	57172574	57172792	(44818397)	+	L1PREC2	LINE/L1	5939	6160	(0)	1318267
3582	24.4	5.3	5.4	chr15	57172793	57172818	(44818371)	+	L1M5	LINE/L1	2811	2825	(3321)	1318266
1646	27.3	5.5	1.8	chr15	58255625	58256187	(43735002)	+	HAL1	LINE/L1	96	680	(1827)	1319851
1680	23.2	11.1	4.1	chr15	58256216	58256916	(43734273)	+	HAL1	LINE/L1	843	1598	(909)	1319851
213	26.2	21.6	4.2	chr15	61730475	61730641	(40260548)	+	MamTip2	DNA/hAT-Tip100	54	257	(48)	1325822
2303	9.0	1.0	0.0	chr15	62767349	62767637	(39223552)	C	AluSp	SINE/Alu	(20)	293	2	1327382
4060	17.7	3.5	0.6	chr15	64236320	64237283	(37753906)	+	L1PB4	LINE/L1	5160	6153	(3)	1329991
2350	8.6	0.0	0.0	chr15	64881651	64881941	(37109248)	+	AluSq2	SINE/Alu	5	295	(18)	1331416
968	23.4	2.4	6.2	chr15	64881942	64882073	(37109116)	+	L1M5	LINE/L1	5480	5606	(637)	1331413
355	21.0	4.7	0.0	chr15	64882084	64882164	(37109025)	C	MIRb	SINE/MIR	(147)	121	37	1331417
164	1.1	3.5	2.9	chr15	67963175	67963376	(34027813)	+	(TTTC)n	Simple_repeat	1	209	(0)	1337469
1847	16.6	0.7	0.7	chr15	67963377	67963678	(34027511)	C	AluJo	SINE/Alu	(10)	302	1	1337470
586	25.5	10.1	1.4	chr15	67963688	67963894	(34027295)	C	MIR	SINE/MIR	(16)	246	20	1337471
1412	24.7	7.2	4.0	chr15	69126772	69126955	(32864234)	+	MLT1D	LTR/ERVL-MaLR	8	192	(313)	1339677
1944	14.6	0.0	3.7	chr15	69126956	69127278	(32863911)	+	AluJb	SINE/Alu	1	311	(1)	1339678
1412	24.7	7.2	4.0	chr15	69127279	69127574	(32863615)	+	MLT1D	LTR/ERVL-MaLR	193	505	(0)	1339677
518	22.0	5.7	4.5	chr15	69127615	69127771	(32863418)	C	MLT1J	LTR/ERVL-MaLR	(3)	509	351	1339679
597	29.5	2.4	5.1	chr15	69127811	69128064	(32863125)	+	L2a	LINE/L2	3168	3414	(12)	1339680
2181	13.3	0.0	0.3	chr15	70781016	70781324	(31209865)	C	AluSx1	SINE/Alu	(2)	310	3	1342720
2844	19.6	5.2	3.0	chr15	71057526	71058162	(30933027)	+	Tigger17a	DNA/TcMar-Tigger	2	653	(1)	1343144
3525	23.7	7.4	5.2	chr15	71058163	71058459	(30932730)	C	L1ME2	LINE/L1	(1833)	4313	4026	1343143
600	23.3	0.0	0.8	chr15	71094025	71094154	(30897035)	C	MER94	DNA/hAT-Blackjack	(5)	129	1	1343200
4590	15.0	1.0	0.8	chr15	71544464	71545188	(30446001)	+	L1MB4	LINE/L1	5450	6175	(5)	1343914
361	30.1	6.2	3.9	chr15	71545189	71545342	(30445847)	C	L2c	LINE/L2	(1341)	2078	1925	1343903
1202	19.6	4.5	0.5	chr15	71545352	71545566	(30445623)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	1343915
261	23.9	2.7	5.3	chr15	72530538	72530612	(29460577)	+	L1ME3B	LINE/L1	651	723	(5519)	1345657
834	24.0	10.3	0.9	chr15	72530702	72531042	(29460147)	+	L1ME3B	LINE/L1	921	1297	(5806)	1345657
560	24.0	0.6	10.0	chr15	73442412	73442540	(28548649)	+	MIRc	SINE/MIR	117	236	(32)	1347153
55	0.0	0.0	0.0	chr15	73718235	73718281	(28272908)	+	(TA)n	Simple_repeat	1	47	(0)	1347602
1727	16.2	0.7	6.5	chr15	73718282	73718434	(28272755)	C	AluJo	SINE/Alu	(175)	137	1	1347601
345	32.3	15.9	0.5	chr15	73718675	73718876	(28272313)	C	L3	LINE/CR1	(366)	3733	3495	1347603
193	21.4	9.1	4.1	chr15	74789863	74789935	(27201254)	+	L2b	LINE/L2	3267	3343	(32)	1349528
13	13.2	0.0	0.0	chr15	74816549	74816573	(27174616)	+	(CCTG)n	Simple_repeat	1	25	(0)	1349580
1962	12.8	1.0	2.0	chr15	74949335	74949639	(27041550)	C	AluSx	SINE/Alu	(10)	302	1	1349852
1312	20.9	8.8	9.6	chr15	74949640	74949716	(27041473)	C	MLT1C	LTR/ERVL-MaLR	(380)	87	3	1349849
1244	18.0	4.5	2.1	chr15	74949954	74950068	(27041121)	C	AluJb	SINE/Alu	(67)	245	120	1349853
2010	11.3	2.0	0.7	chr15	74970422	74970721	(27020468)	C	AluSz	SINE/Alu	(8)	304	1	1349901
1728	17.4	0.3	0.3	chr15	74970724	74971017	(27020172)	C	AluJo	SINE/Alu	(18)	294	1	1349902
15861	12.5	2.7	0.3	chr15	76837645	76838394	(25152795)	+	L1PA15	LINE/L1	5860	6608	(177)	1353091
702	28.4	8.1	0.0	chr15	77715995	77716229	(24274960)	C	MIR	SINE/MIR	(0)	262	7	1354526
1221	15.9	0.0	0.0	chr15	77716269	77716444	(24274745)	C	AluJb	SINE/Alu	(0)	312	137	1354527
538	19.2	8.5	5.8	chr15	78090826	78091030	(23900159)	C	L1ME3A	LINE/L1	(1)	6172	5962	1355182
430	26.4	4.7	4.0	chr15	78091032	78091157	(23900032)	+	SVA_A	Retroposon/SVA	186	312	(1075)	1355183
692	14.0	0.0	0.0	chr15	78091052	78091158	(23900031)	C	FLAM_C	SINE/Alu	(15)	128	22	1355184
1906	16.5	0.0	1.6	chr15	78546162	78546464	(23444725)	+	AluJo	SINE/Alu	1	298	(14)	1356143
2463	7.9	0.3	0.0	chr15	78546761	78547065	(23444124)	C	AluSx	SINE/Alu	(6)	306	1	1356144
370	29.0	10.6	3.4	chr15	78664555	78664905	(23326284)	+	L2c	LINE/L2	2897	3302	(85)	1356373
592	30.6	9.5	6.1	chr15	78664935	78665221	(23325968)	C	HAL1	LINE/L1	(1145)	1362	1062	1356374
574	17.8	15.1	10.3	chr15	78907723	78907935	(23083254)	+	LTR50	LTR/ERVL	8	232	(563)	1356847
533	26.9	4.4	5.3	chr15	78908015	78908222	(23082967)	C	LTR83	LTR/ERVL	(566)	214	9	1356849
1973	10.1	1.1	1.1	chr15	78908268	78908534	(23082655)	C	AluSz	SINE/Alu	(21)	291	25	1356850
674	35.7	6.1	5.1	chr15	79406883	79407567	(22583622)	C	ERV3-16A3_I-int	LTR/ERVL	(3596)	1400	709	1357811
1164	22.3	0.0	0.9	chr15	79407576	79407801	(22583388)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	1357812
194	35.5	10.2	2.5	chr15	80665201	80665281	(21325908)	C	L2b	LINE/L2	(41)	3334	3247	1359890
338	33.5	8.8	4.6	chr15	80665473	80665542	(21325647)	C	L2b	LINE/L2	(653)	2766	2690	1359890
1877	16.8	1.0	0.3	chr15	80665543	80665852	(21325337)	+	AluJb	SINE/Alu	1	312	(0)	1359891
13	27.0	1.6	3.2	chr15	82016680	82016740	(19974449)	+	(AAGGAGC)n	Simple_repeat	1	62	(0)	1362189
379	21.4	4.5	0.0	chr15	82016879	82016962	(19974227)	C	MLT1J1	LTR/ERVL-MaLR	(356)	88	1	1362190
475	33.9	0.0	3.2	chr15	82017246	82017431	(19973758)	C	MIRb	SINE/MIR	(0)	268	89	1362191
29136	24.8	1.8	2.1	chr15	82374069	82380646	(19610543)	C	HERVIP10B3-int	LTR/ERV1	(4)	7599	1039	1362784
312	28.5	6.1	3.9	chr15	83236025	83236232	(18754957)	+	ERVL-E-int	LTR/ERVL	5443	5655	(12)	1364275
430	18.9	5.1	5.1	chr15	83236239	83236355	(18754834)	+	LTR50	LTR/ERVL	1	117	(678)	1364275
2147	13.2	0.7	0.0	chr15	83236356	83236651	(18754538)	C	AluSx1	SINE/Alu	(14)	298	1	1364278
997	20.6	13.0	0.3	chr15	84934559	84934841	(17056348)	C	MER33	DNA/hAT-Charlie	(0)	324	1	1366947
3254	19.1	9.6	1.9	chr15	86176134	86177004	(15814185)	C	L1MA4A	LINE/L1	(5886)	1323	114	1369034
201	33.3	0.0	0.0	chr15	88285176	88285229	(13705960)	C	MIR	SINE/MIR	(6)	256	203	1372106
251	28.3	20.3	0.9	chr15	88838257	88838363	(13152826)	C	Charlie16a	DNA/hAT-Charlie	(206)	136	4	1373114
1255	22.8	6.4	2.6	chr15	89108182	89108559	(12882630)	C	MLT1C	LTR/ERVL-MaLR	(66)	401	9	1373659
446	30.1	3.2	3.8	chr15	90051805	90052007	(11939182)	C	MIRb	SINE/MIR	(72)	196	4	1375498
2420	8.6	0.7	0.0	chr15	90245195	90245495	(11745694)	+	AluSg	SINE/Alu	1	303	(7)	1375969
241	24.7	9.7	1.1	chr15	90245782	90245875	(11745314)	+	MER103C	DNA/hAT-Charlie	113	215	(82)	1375970
257	23.5	0.0	0.0	chr15	91184118	91184168	(10807021)	+	L2b	LINE/L2	3291	3341	(34)	1377860
216	30.5	4.7	0.0	chr15	91184254	91184335	(10806854)	+	MIRb	SINE/MIR	2	87	(181)	1377861
521	25.6	19.4	0.4	chr15	92537668	92537796	(9453393)	C	L2	LINE/L2	(472)	2947	2793	1380019
2984	17.9	7.2	1.7	chr15	92537797	92538376	(9452813)	C	MER90a	LTR/ERV1	(0)	614	1	1380020
423	19.5	9.6	4.2	chr15	94359550	94359667	(7631522)	+	Charlie15a	DNA/hAT-Charlie	99	223	(1)	1382959
292	33.3	4.3	2.9	chr15	94359670	94359808	(7631381)	C	MIR3	SINE/MIR	(49)	159	19	1382960
319	33.7	2.2	0.0	chr15	94359942	94360030	(7631159)	C	MER20B	DNA/hAT-Charlie	(619)	164	74	1382961
1302	11.8	7.4	7.4	chr15	95574976	95575036	(6416153)	C	Tigger3c	DNA/TcMar-Tigger	(2)	600	545	1384653
1851	10.3	0.4	0.0	chr15	95575037	95575270	(6415919)	C	AluSz	SINE/Alu	(77)	235	1	1384654
198	12.5	0.0	0.0	chr15	95888658	95888689	(6102500)	C	L2a	LINE/L2	(0)	3426	3395	1385071
199	24.6	0.0	12.9	chr15	95888912	95888981	(6102208)	+	MIR3	SINE/MIR	125	185	(23)	1385072
1787	20.6	3.8	2.9	chr15	99637943	99638356	(2352833)	C	L1MEg	LINE/L1	(694)	6576	6350	1390400
953	24.8	9.5	8.2	chr15	99638372	99638881	(2352308)	C	L1MEg	LINE/L1	(5015)	2318	1802	1390400
245	29.0	0.0	0.0	chr15	99912134	99912195	(2078994)	C	L4_C_Mam	LINE/RTE-X	(210)	4928	4867	1390794
229	21.7	16.2	0.0	chr15	99912258	99912340	(2078849)	C	L2c	LINE/L2	(20)	3367	3269	1390795
57	3.2	1.6	0.0	chr15	99912482	99912545	(2078644)	+	(CCTT)n	Simple_repeat	1	65	(0)	1390796
2154	14.0	0.0	0.3	chr15	99912546	99912852	(2078337)	C	AluSq2	SINE/Alu	(7)	306	1	1390797
378	36.3	3.1	2.1	chr15	100269963	100270156	(1721033)	C	L3	LINE/CR1	(1336)	2763	2568	1391238
14	11.5	0.0	3.3	chr16	81484	81513	(90256832)	+	(CCTGG)n	Simple_repeat	1	30	(0)	1394145
50	0.0	0.0	2.0	chr16	637258	637307	(89701038)	+	(GCGGCAGGG)n	Simple_repeat	1	50	(0)	1395037
2362	9.6	0.3	0.0	chr16	1413287	1413587	(88924758)	+	AluSp	SINE/Alu	1	302	(11)	1395874
2216	13.1	0.0	1.0	chr16	1595773	1596085	(88742260)	+	AluSz	SINE/Alu	3	312	(0)	1396144
19	10.0	0.0	0.0	chr16	1596325	1596356	(88741989)	+	(TTTTG)n	Simple_repeat	1	32	(0)	1396145
298	23.1	3.0	0.0	chr16	2423446	2423510	(87914835)	+	MIR	SINE/MIR	175	241	(21)	1397424
2276	10.4	1.6	0.0	chr16	2423517	2423815	(87914530)	C	AluSq2	SINE/Alu	(5)	308	5	1397425
201	19.1	2.1	0.0	chr16	5528289	5528335	(84810010)	C	MER5A	DNA/hAT-Charlie	(56)	133	86	1403478
220	39.5	0.8	0.0	chr16	5528363	5528481	(84809864)	C	L2b	LINE/L2	(2)	3373	3254	1403479
19	4.5	0.0	0.0	chr16	5528543	5528565	(84809780)	+	(T)n	Simple_repeat	1	23	(0)	1403480
16	19.6	0.0	0.0	chr16	5528597	5528626	(84809719)	+	(TC)n	Simple_repeat	1	30	(0)	1403481
16	16.0	3.6	5.3	chr16	5528614	5528621	(84809724)	+	(CTCTCCC)n	Simple_repeat	1	58	(0)	1403482
17	29.5	0.0	0.0	chr16	5528622	5528673	(84809672)	+	(CTCCC)n	Simple_repeat	1	52	(0)	1403483
11	20.1	2.9	0.0	chr16	11218596	11218629	(79119716)	+	(ACTTTT)n	Simple_repeat	1	35	(0)	1415136
192	29.2	5.8	4.4	chr16	11218835	11218902	(79119443)	+	MIR	SINE/MIR	1	69	(193)	1415137
1112	24.6	14.2	2.9	chr16	11218908	11219364	(79118981)	C	LTR33A	LTR/ERVL	(2)	518	10	1415138
377	31.9	2.4	6.2	chr16	11219400	11219576	(79118769)	+	MIRb	SINE/MIR	96	265	(3)	1415139
656	26.9	12.6	9.1	chr16	11516947	11517442	(78820903)	+	MER34A	LTR/ERV1	53	571	(0)	1415870
290	28.2	13.4	5.3	chr16	11517443	11517571	(78820774)	C	MIR	SINE/MIR	(89)	173	29	1415869
863	31.0	14.3	3.6	chr16	13908151	13908668	(76429677)	+	L2a	LINE/L2	2817	3409	(17)	1421129
1153	23.2	14.2	1.4	chr16	13908674	13909110	(76429235)	+	L1MEc	LINE/L1	34	535	(5865)	1421131
2360	11.5	0.3	0.7	chr16	13940104	13940407	(76397938)	+	AluSz	SINE/Alu	1	303	(9)	1421183
2823	19.4	5.0	6.1	chr16	13940408	13940901	(76397444)	C	MER77	LTR/ERVL	(114)	490	1	1421182
3114	14.8	3.5	4.2	chr16	14312955	14313425	(76024920)	C	LTR48B	LTR/ERV1	(172)	472	2	1421825
235	21.8	4.9	1.3	chr16	14425280	14425358	(75912987)	C	L1MC5a	LINE/L1	(262)	2515	2434	1422133
860	15.4	0.0	0.8	chr16	14425382	14425512	(75912833)	+	AluJb	SINE/Alu	7	136	(176)	1422134
2467	6.9	0.3	0.7	chr16	14425513	14425816	(75912529)	+	AluSg7	SINE/Alu	1	303	(6)	1422135
227	34.5	11.3	7.0	chr16	14614277	14614569	(75723776)	C	L2b	LINE/L2	(2494)	925	620	1422486
2257	10.1	1.9	0.0	chr16	14614570	14614876	(75723469)	+	AluSp	SINE/Alu	1	313	(0)	1422495
1759	13.4	0.0	0.0	chr16	15418884	15419122	(74919223)	C	AluSz6	SINE/Alu	(72)	240	2	1424344
2064	21.3	1.4	1.1	chr16	15419188	15419554	(74918791)	C	L1PB4	LINE/L1	(7)	6149	5781	1424345
2198	12.4	0.7	0.0	chr16	15474680	15474986	(74863359)	C	AluSz	SINE/Alu	(3)	309	1	1424486
225	29.9	2.5	1.3	chr16	15475206	15475283	(74863062)	C	L1MD2	LINE/L1	(5670)	1274	1196	1424474
1594	16.8	8.4	0.3	chr16	15475313	15475640	(74862705)	C	MER77B	LTR/ERVL	(20)	680	324	1424487
2150	11.0	0.3	1.7	chr16	18911222	18911520	(71426825)	+	AluSx3	SINE/Alu	1	295	(16)	1432147
2274	10.0	0.3	0.3	chr16	18911801	18912099	(71426246)	+	AluSx	SINE/Alu	2	300	(12)	1432148
164	17.6	2.7	0.3	chr16	23377487	23377818	(66960527)	+	(TTCC)n	Simple_repeat	1	341	(0)	1442145
537	27.5	13.3	3.6	chr16	23377831	23377994	(66960351)	C	L2a	LINE/L2	(42)	3384	3186	1442146
1990	12.4	1.0	1.9	chr16	23377995	23378308	(66960037)	C	AluJr	SINE/Alu	(0)	312	2	1442147
383	31.5	10.1	8.2	chr16	24887986	24888474	(65449871)	+	L1M6	LINE/L1	2842	3314	(3086)	1445746
2382	10.7	0.3	0.0	chr16	24888475	24888783	(65449562)	C	AluSx	SINE/Alu	(2)	310	1	1445749
2228	10.0	0.3	2.0	chr16	25186141	25186278	(65152067)	C	AluSz	SINE/Alu	(177)	135	1	1446398
485	20.9	5.3	10.6	chr16	25186279	25186429	(65151916)	C	L1M3	LINE/L1	(2428)	3712	3563	1446394
541	18.5	1.4	2.2	chr16	25186408	25186551	(65151794)	C	L1M3	LINE/L1	(3448)	2695	2566	1446394
2212	22.9	9.7	5.9	chr16	26627516	26628110	(63710235)	+	MER72	LTR/ERV1	96	722	(0)	1449363
206	22.4	0.0	10.8	chr16	29857115	29857179	(60481166)	+	L2b	LINE/L2	3310	3367	(8)	1456718
206	35.5	1.3	2.6	chr16	29857212	29857289	(60481056)	+	MIRb	SINE/MIR	163	239	(29)	1456719
193	20.5	2.5	0.0	chr16	29857326	29857364	(60480981)	+	L2b	LINE/L2	3367	3406	(20)	1456718
2611	6.4	0.0	0.0	chr16	29967646	29967956	(60370389)	+	AluY	SINE/Alu	1	311	(0)	1456994
483	29.9	1.4	3.5	chr16	30491798	30491939	(59846406)	C	MIR	SINE/MIR	(116)	146	8	1458190
2401	8.2	0.7	0.3	chr16	30492247	30492551	(59845794)	C	AluSx1	SINE/Alu	(6)	306	1	1458192
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
22507	19.7	5.3	5.8	chr16	35739757	35745299	(54593046)	C	HERVH-int	LTR/ERV1	(2198)	5515	1	1465076
654	21.6	1.7	0.0	chr16	46763933	46764048	(43574297)	+	AluJr	SINE/Alu	1	118	(194)	1465986
1749	17.4	0.7	3.1	chr16	46764094	46764410	(43573935)	+	AluJr	SINE/Alu	2	310	(2)	1465987
17	29.4	3.2	1.6	chr16	49548614	49548675	(40789670)	+	GA-rich	Low_complexity	1	64	(0)	1470709
15	12.2	0.0	0.0	chr16	50393197	50393223	(39945122)	+	(ATA)n	Simple_repeat	1	27	(0)	1472377
20	24.9	2.7	2.6	chr16	50393481	50393555	(39944790)	+	(GTCT)n	Simple_repeat	1	77	(0)	1472378
998	25.1	2.7	1.9	chr16	50393941	50394196	(39944149)	+	MIR	SINE/MIR	1	258	(4)	1472379
23	12.6	0.0	0.0	chr16	53104987	53105021	(37233324)	+	(A)n	Simple_repeat	1	35	(0)	1477248
770	14.4	0.8	0.8	chr16	53105025	53105142	(37233203)	C	AluJr	SINE/Alu	(194)	118	1	1477249
1015	25.3	9.9	6.4	chr16	53105159	53105614	(37232731)	C	L1ME4b	LINE/L1	(0)	892	419	1477250
499	6.0	4.3	0.0	chr16	53443266	53443332	(36895013)	C	U6	snRNA	(37)	70	1	1477863
1755	16.3	0.3	3.7	chr16	53486010	53486304	(36852041)	+	AluJb	SINE/Alu	2	286	(26)	1477930
1635	21.1	17.8	4.6	chr16	53486305	53486543	(36851802)	+	L1MC	LINE/L1	3362	3610	(2536)	1477927
3114	22.4	11.8	3.4	chr16	53486571	53487881	(36850464)	+	L1MD	LINE/L1	3916	5352	(794)	1477931
2182	11.6	0.3	1.0	chr16	54948228	54948528	(35389817)	+	AluSz	SINE/Alu	1	299	(13)	1480420
447	28.3	2.6	0.0	chr16	54948823	54948950	(35389395)	+	MIRb	SINE/MIR	5	146	(122)	1480421
330	21.4	3.9	0.7	chr16	55019355	55020205	(35318140)	+	(CA)n	Simple_repeat	1	884	(0)	1480590
410	30.7	0.0	2.3	chr16	57480761	57480890	(32857455)	C	MIR3	SINE/MIR	(21)	187	61	1485143
181	17.0	2.1	2.1	chr16	66382353	66382400	(23955945)	C	MIR1_Amn	SINE/MIR	(114)	116	69	1499626
746	22.7	0.0	0.0	chr16	66827853	66827984	(23510361)	C	FLAM_C	SINE/Alu	(0)	133	2	1500494
1804	16.9	3.0	0.0	chr16	67063436	67063731	(23274614)	C	AluSx3	SINE/Alu	(6)	305	1	1501003
820	9.0	0.0	1.8	chr16	67099414	67099533	(23238812)	C	FLAM_C	SINE/Alu	(1)	132	21	1501095
2238	11.4	0.0	1.9	chr16	68622251	68622557	(21715788)	+	AluSx4	SINE/Alu	2	302	(8)	1503913
1718	18.1	0.7	2.3	chr16	68622563	68622861	(21715484)	+	AluJo	SINE/Alu	1	294	(18)	1503914
68	0.0	0.0	0.0	chr16	68622876	68622933	(21715412)	+	(CA)n	Simple_repeat	1	58	(0)	1503915
1969	19.5	0.0	1.0	chr16	73737030	73737336	(16601009)	C	AluJo	SINE/Alu	(8)	304	1	1513457
1956	15.6	0.3	0.0	chr16	74771180	74771462	(15566883)	C	AluSz	SINE/Alu	(0)	312	29	1515411
2484	8.1	0.3	0.0	chr16	75318397	75318703	(15019642)	C	AluYj4	SINE/Alu	(3)	308	1	1516528
2238	10.5	1.3	0.0	chr16	75319048	75319341	(15019004)	C	AluSc	SINE/Alu	(11)	298	1	1516529
434	28.6	6.4	2.6	chr16	78488655	78488848	(11849497)	+	MIRb	SINE/MIR	5	206	(62)	1521808
259	32.9	17.4	2.2	chr16	81329414	81330261	(9008084)	+	L2	LINE/L2	1824	2827	(592)	1527061
3170	22.9	7.4	1.7	chr16	81330282	81330927	(9007418)	+	L1MC4a	LINE/L1	6803	7489	(393)	1527062
187	21.1	0.0	2.6	chr16	83066147	83066185	(7272160)	+	AmnSINE1	SINE/5S-Deu-L2	488	525	(50)	1530312
320	33.3	1.1	0.0	chr16	83066240	83066326	(7272019)	C	MER81	DNA/hAT-Blackjack	(0)	114	27	1530313
369	27.0	2.0	2.9	chr16	83066329	83066431	(7271914)	C	MER81	DNA/hAT-Blackjack	(10)	104	3	1530314
434	26.3	3.4	0.9	chr16	83066515	83066629	(7271716)	C	MamRep605	LTR?	(220)	629	512	1530315
310	25.8	9.2	0.0	chr16	83996339	83996427	(6341918)	C	MER45A	DNA/hAT-Tip100	(0)	178	81	1532001
1784	26.1	5.4	0.7	chr16	84511580	84512143	(5826202)	C	L1MC3	LINE/L1	(20)	7765	7174	1532954
3093	18.2	4.2	8.3	chr16	84512416	84512543	(5825802)	+	LTR51	LTR/ERV1	1	102	(569)	1532955
2191	11.3	0.7	0.0	chr16	84512544	84512835	(5825510)	C	AluSg	SINE/Alu	(16)	294	1	1532956
15	0.0	0.0	0.0	chr16	85710273	85710291	(4628054)	+	(GCT)n	Simple_repeat	1	19	(0)	1535273
573	31.1	11.1	2.0	chr16	85710607	85711005	(4627340)	+	L2c	LINE/L2	2936	3395	(31)	1535274
15	10.7	0.0	5.9	chr16	86220609	86220642	(4117703)	+	(TTCT)n	Simple_repeat	1	34	(0)	1536270
29	15.9	0.0	0.0	chr16	86220670	86220718	(4117627)	+	(AC)n	Simple_repeat	1	49	(0)	1536271
13	24.9	2.0	2.0	chr16	86220873	86220921	(4117424)	+	(TTCT)n	Simple_repeat	1	50	(0)	1536272
2172	12.2	0.3	0.0	chr16	87580370	87580663	(2757682)	C	AluSz	SINE/Alu	(16)	296	2	1538715
491	29.9	8.4	12.3	chr16	87580664	87580891	(2757454)	+	Kanga2_a	DNA/TcMar-Tc2	439	684	(204)	1538713
201	35.6	2.2	2.2	chr16	88351259	88351347	(1986998)	+	MIR3	SINE/MIR	96	184	(24)	1539847
12	29.8	0.0	2.0	chr16	88351688	88351738	(1986607)	+	(CCCCCA)n	Simple_repeat	1	51	(0)	1539848
12	18.1	0.0	3.0	chr16	88726472	88726504	(1611841)	+	(GGCCAG)n	Simple_repeat	1	33	(0)	1540364
1397	16.8	8.8	0.0	chr16	89459686	89459953	(878392)	+	AluJr	SINE/Alu	10	303	(9)	1541289
2183	10.8	0.0	1.3	chr16	89459954	89460292	(878053)	+	AluSz	SINE/Alu	1	312	(0)	1541290
1216	17.0	0.5	3.3	chr16	89874700	89874911	(463434)	C	AluJb	SINE/Alu	(104)	208	3	1542011
236	23.3	7.5	1.1	chr16	89874921	89875007	(463338)	C	MER77B	LTR/ERVL	(58)	642	550	1542012
903	20.5	0.6	0.6	chr16	89875008	89875163	(463182)	C	FRAM	SINE/Alu	(20)	156	1	1542013
386	21.4	7.2	3.5	chr16	89875175	89875348	(462997)	C	L1ME3G	LINE/L1	(701)	223	43	1542014
2440	4.6	0.0	0.0	chr16	89875514	89875820	(462525)	C	AluY	SINE/Alu	(0)	311	2	1542015
1058	19.9	30.1	0.2	chr16	89991913	89992339	(346006)	C	MER68	LTR/ERVL	(1)	562	4	1542215
291	22.7	0.0	0.0	chr17	2473283	2473348	(80784093)	C	Tigger17c	DNA/TcMar-Tigger	(1122)	66	1	1549182
1173	14.1	0.0	0.6	chr17	2473753	2473922	(80783519)	C	AluJb	SINE/Alu	(27)	285	117	1549183
763	26.4	4.8	4.0	chr17	3049536	3049784	(80207657)	C	ORSL-2a	DNA/hAT-Tip100	(84)	258	8	1550499
1922	8.6	7.6	0.0	chr17	4035840	4036095	(79221346)	+	AluSx1	SINE/Alu	23	299	(13)	1552231
568	20.4	3.4	6.5	chr17	4036228	4036411	(79221030)	C	MER20	DNA/hAT-Charlie	(0)	219	42	1552232
2363	8.1	1.3	0.0	chr17	4036453	4036749	(79220692)	+	AluSq2	SINE/Alu	1	301	(12)	1552233
264	27.7	0.0	1.2	chr17	9005492	9005575	(74251866)	C	MER5A1	DNA/hAT-Charlie	(71)	95	13	1561881
2490	8.5	0.3	0.0	chr17	9050388	9050692	(74206749)	+	AluSz	SINE/Alu	1	306	(6)	1561973
657	27.9	9.5	4.8	chr17	9050693	9050878	(74206563)	+	MIRb	SINE/MIR	59	262	(6)	1561972
994	19.2	9.4	1.4	chr17	12481108	12481382	(70776059)	+	Arthur1B	DNA/hAT-Tip100	923	1221	(4)	1568142
1862	16.2	0.0	2.0	chr17	16228989	16229285	(67028156)	+	AluJr	SINE/Alu	1	291	(21)	1574465
3952	16.4	3.6	7.6	chr17	16229286	16229835	(67027606)	C	L1MB4	LINE/L1	(358)	5822	5316	1574461
634	26.0	17.4	0.4	chr17	20823728	20823970	(62433471)	+	MLT1J	LTR/ERVL-MaLR	203	495	(17)	1583188
493	33.2	5.8	2.6	chr17	21095706	21095937	(62161504)	C	L2c	LINE/L2	(35)	3352	3113	1583644
1554	18.4	3.9	4.8	chr17	21095976	21096284	(62161157)	+	AluJr	SINE/Alu	1	306	(6)	1583645
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
4093	20.1	4.2	8.2	chr17	35323061	35323568	(47933873)	C	LTR28B	LTR/ERV1	(0)	974	505	1602084
2284	11.0	0.3	2.3	chr17	35323569	35323869	(47933572)	+	AluSg	SINE/Alu	1	295	(15)	1602085
242	19.7	0.0	10.3	chr17	35489936	35490003	(47767438)	+	L1M5	LINE/L1	3928	3988	(2158)	1602281
1608	19.7	4.3	0.0	chr17	37472960	37473127	(45784314)	C	AluJr	SINE/Alu	(10)	302	128	1605951
26	0.0	0.0	0.0	chr17	37473128	37473152	(45784289)	+	(T)n	Simple_repeat	1	25	(0)	1605952
1608	19.7	4.3	0.0	chr17	37473153	37473272	(45784169)	C	AluJr	SINE/Alu	(186)	126	1	1605951
762	24.7	5.7	3.7	chr17	40620509	40620895	(42636546)	C	MER39	LTR/ERV1	(60)	647	308	1612394
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
487	25.7	17.4	5.6	chr17	43317584	43317941	(39939500)	+	L2	LINE/L2	665	1073	(2346)	1617593
188	28.6	16.3	2.5	chr17	43317946	43318024	(39939417)	+	L2	LINE/L2	1233	1324	(2095)	1617593
2716	8.8	2.8	0.8	chr17	43318085	43318441	(39939000)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1617594
2104	12.5	0.3	0.7	chr17	44142934	44143237	(39114204)	C	AluSx	SINE/Alu	(9)	303	1	1619323
1886	15.5	0.7	2.0	chr17	44143239	44143363	(39114078)	+	AluJr	SINE/Alu	12	138	(174)	1619324
2247	11.5	0.3	0.7	chr17	44143364	44143667	(39113774)	+	AluSx3	SINE/Alu	3	305	(6)	1619325
437	30.5	8.8	1.6	chr17	44540626	44540819	(38716622)	+	MIRb	SINE/MIR	36	238	(30)	1620175
218	25.5	11.7	2.0	chr17	45935789	45935888	(37321553)	+	L2c	LINE/L2	3102	3212	(175)	1623073
470	28.2	6.5	0.6	chr17	46805860	46806052	(36451389)	+	MIR	SINE/MIR	5	214	(54)	1624762
2019	11.5	1.1	0.0	chr17	46806176	46806507	(36450934)	C	AluSp	SINE/Alu	(0)	313	2	1624763
2236	12.2	0.0	0.7	chr17	48233573	48233868	(35023573)	+	AluSx3	SINE/Alu	1	294	(17)	1627508
2344	30.0	4.3	3.9	chr17	49114055	49115235	(34142206)	C	ERV24B_Prim-int	LTR/ERV1	(4281)	3332	2147	1629243
329	34.5	4.6	4.8	chr17	49115372	49115767	(34141674)	C	ERV24B_Prim-int	LTR/ERV1	(5612)	1963	1569	1629243
1533	17.3	7.2	10.1	chr17	50809520	50809858	(32447583)	+	MLT1A1	LTR/ERVL-MaLR	4	347	(61)	1632507
279	40.6	0.7	0.0	chr17	50893004	50893136	(32364305)	C	MIRc	SINE/MIR	(89)	179	46	1632676
1456	14.6	0.0	17.1	chr17	51131354	51131716	(32125725)	C	AluJo	SINE/Alu	(11)	301	1	1633187
2192	11.0	0.3	0.3	chr17	51131899	51132228	(32125213)	+	AluSx	SINE/Alu	1	312	(0)	1633188
1833	15.5	2.9	4.4	chr17	51167706	51168022	(32089419)	+	AluJo	SINE/Alu	1	312	(0)	1633283
18	24.8	0.0	0.0	chr17	51168079	51168118	(32089323)	+	(AT)n	Simple_repeat	1	40	(0)	1633284
345	22.7	9.9	3.0	chr17	57253762	57253893	(26003548)	C	L2a	LINE/L2	(973)	2446	2305	1642975
39	0.0	2.6	0.0	chr17	57254036	57254074	(26003367)	+	(ATA)n	Simple_repeat	1	40	(0)	1642976
637	22.4	3.3	3.1	chr17	57254096	57254277	(26003164)	+	L1ME1	LINE/L1	6008	6177	(156)	1642977
180	22.9	0.0	0.0	chr17	57341215	57341249	(25916192)	+	MER5A	DNA/hAT-Charlie	32	66	(123)	1643114
2296	10.9	0.0	0.3	chr17	58286512	58286814	(24970627)	+	AluSx	SINE/Alu	3	304	(8)	1644775
1760	16.8	0.7	3.7	chr17	58286822	58287118	(24970323)	+	AluJo	SINE/Alu	3	290	(22)	1644776
1014	27.8	9.0	5.6	chr17	58287151	58288096	(24969345)	C	L1ME3G	LINE/L1	(743)	5403	4518	1644771
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
2663	5.8	0.0	0.0	chr17	60576571	60576881	(22680560)	C	AluSq2	SINE/Alu	(0)	313	3	1649569
3248	23.4	12.8	11.2	chr17	60576882	60577935	(22679506)	C	L1M4	LINE/L1	(6371)	1146	154	1649565
7261	21.7	5.7	4.2	chr17	61116297	61117310	(22140131)	C	L1MDa	LINE/L1	(4261)	2372	1313	1650524
1759	18.0	0.3	1.0	chr17	61117311	61117599	(22139842)	+	AluJr	SINE/Alu	1	287	(25)	1650530
7261	21.7	5.7	4.2	chr17	61117600	61117697	(22139744)	C	L1MDa	LINE/L1	(5321)	1312	1255	1650524
981	13.9	4.3	6.7	chr17	61117698	61117890	(22139551)	C	L1MC1	LINE/L1	(17)	6316	6129	1650531
329	26.8	5.9	5.0	chr17	61835475	61835674	(21421767)	+	HAL1	LINE/L1	2265	2466	(41)	1651685
249	37.1	7.3	0.0	chr17	61835707	61835884	(21421557)	+	L1MEc	LINE/L1	4975	5166	(1153)	1651676
243	21.9	2.4	7.9	chr17	62206550	62206638	(21050803)	+	MLT1N2	LTR/ERVL-MaLR	1	84	(511)	1652511
574	23.3	15.9	2.4	chr17	62206989	62207199	(21050242)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	268	1652512
1324	6.8	0.0	5.7	chr17	63376152	63376327	(19881114)	+	AluY	SINE/Alu	1	166	(145)	1654650
721	12.6	18.5	1.8	chr17	63376332	63376501	(19880940)	+	THE1D	LTR/ERVL-MaLR	67	271	(110)	1654651
216	31.1	8.3	1.6	chr17	64343915	64344038	(18913403)	C	L2c	LINE/L2	(2)	3385	3253	1656372
1941	12.8	0.3	2.8	chr17	65057262	65057581	(18199860)	C	AluSz	SINE/Alu	(0)	312	1	1657853
1609	19.3	0.7	1.4	chr17	65292998	65293287	(17964154)	C	AluJr	SINE/Alu	(23)	289	2	1658378
943	29.1	3.0	1.8	chr17	65417263	65417595	(17839846)	C	MER102b	DNA/hAT-Charlie	(4)	337	1	1658614
490	19.6	0.0	2.7	chr17	65417606	65417715	(17839726)	C	MIR3	SINE/MIR	(58)	150	44	1658615
845	28.5	27.7	5.2	chr17	66049756	66050117	(17207324)	+	L1MEh	LINE/L1	931	1379	(856)	1659620
264	32.8	0.8	4.6	chr17	66050153	66050283	(17207158)	C	L1M7	LINE/L1	(4705)	1513	1388	1659622
513	29.7	4.6	0.0	chr17	66050418	66050562	(17206879)	C	HAL1	LINE/L1	(1995)	512	361	1659623
3112	17.2	4.1	6.9	chr17	66846228	66846938	(16410503)	C	L1MB5	LINE/L1	(0)	6174	5485	1660912
346	33.2	0.5	0.9	chr17	66846944	66847064	(16410377)	C	MIR	SINE/MIR	(91)	177	47	1660911
774	28.9	4.7	6.6	chr17	68065288	68065635	(15191806)	+	MER102b	DNA/hAT-Charlie	1	341	(0)	1663449
227	24.5	1.9	0.0	chr17	68065655	68065707	(15191734)	C	L2b	LINE/L2	(0)	3375	3322	1663450
2085	13.9	2.0	0.0	chr17	68065887	68066180	(15191261)	C	AluSx	SINE/Alu	(12)	300	1	1663451
934	14.4	0.0	0.0	chr17	68848337	68848468	(14408973)	+	FLAM_C	SINE/Alu	1	132	(11)	1664895
2405	10.9	0.0	0.0	chr17	69897994	69898304	(13359137)	C	AluSx3	SINE/Alu	(0)	311	1	1666477
238	31.2	3.8	11.0	chr17	69898305	69898431	(13359010)	+	Charlie8	DNA/hAT-Charlie	139	250	(2178)	1666474
335	23.8	16.2	1.5	chr17	69898602	69898736	(13358705)	C	MIR3	SINE/MIR	(21)	187	32	1666478
1201	16.3	0.0	0.0	chr17	70588289	70588460	(12668981)	C	AluSx	SINE/Alu	(138)	174	3	1667522
341	13.8	0.0	0.0	chr17	70588723	70588780	(12668661)	C	L1PA16	LINE/L1	(9)	6157	6100	1667523
1956	11.5	6.0	0.0	chr17	70588782	70589111	(12668330)	+	L1P4	LINE/L1	4120	4470	(1676)	1667524
40	0.0	0.0	0.0	chr17	70655109	70655142	(12602299)	+	(GT)n	Simple_repeat	1	34	(0)	1667626
295	34.6	3.0	0.6	chr17	70864529	70864688	(12392753)	+	Plat_L3	LINE/CR1	3010	3173	(413)	1667918
1006	29.4	14.0	4.4	chr17	71079113	71079584	(12177857)	C	L2a	LINE/L2	(0)	3426	2923	1668236
1755	9.7	8.5	0.0	chr17	71079585	71079853	(12177588)	+	L1PA13	LINE/L1	5865	6158	(5)	1668237
22762	6.1	1.0	2.2	chr17	75026148	75027235	(8230206)	+	HERVK14-int	LTR/ERVK	1935	3025	(3071)	1675199
2073	15.2	0.0	0.3	chr17	77232865	77233161	(6024280)	+	AluJb	SINE/Alu	3	298	(14)	1679689
1721	18.4	5.6	4.2	chr17	77233162	77233454	(6023987)	C	L1MD1	LINE/L1	(656)	5586	5285	1679687
867	15.7	4.4	0.0	chr17	78604900	78605052	(4652389)	+	MER54A	LTR/ERVL	25	184	(717)	1682120
1062	10.6	0.0	0.7	chr17	78605053	78605193	(4652248)	C	AluSx4	SINE/Alu	(169)	141	2	1682121
2339	12.5	10.3	0.8	chr17	79352123	79352509	(3904932)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1683326
16	9.0	0.0	9.3	chr17	79720745	79720787	(3536654)	+	(CCTGCT)n	Simple_repeat	1	43	(0)	1683809
3474	15.7	4.0	2.0	chr17	80587669	80588150	(2669291)	C	L1MA7	LINE/L1	(21)	6270	5777	1685269
2291	11.9	0.7	0.0	chr17	80588151	80588460	(2668981)	C	AluSx1	SINE/Alu	(0)	312	1	1685270
3474	15.7	4.0	2.0	chr17	80588461	80588639	(2668802)	C	L1MA7	LINE/L1	(515)	5776	5596	1685269
2253	25.5	10.8	8.8	chr17	80588624	80590178	(2667263)	C	L1ME3B	LINE/L1	(736)	5437	3854	1685268
2620	3.2	0.0	2.3	chr17	81667317	81667626	(1589815)	C	AluY	SINE/Alu	(8)	303	1	1686614
2144	13.0	0.7	0.0	chr17	81872373	81872672	(1384769)	C	AluSx	SINE/Alu	(1)	311	10	1686846
295	21.8	15.0	4.8	chr17	82109360	82109575	(1147866)	+	L1MEh	LINE/L1	1946	2189	(46)	1687144
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
426	30.4	9.3	0.0	chr17	82497780	82497983	(759458)	C	Arthur1	DNA/hAT-Tip100	(324)	3623	3399	1687735
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
296	25.7	18.1	7.1	chr18	3329605	3329901	(77043384)	+	L2c	LINE/L2	3051	3387	(0)	1694169
2278	10.4	0.0	1.3	chr18	3495089	3495386	(76877899)	C	AluSx	SINE/Alu	(18)	294	1	1694521
1781	14.5	6.9	0.0	chr18	9070357	9070639	(71302646)	C	AluJo	SINE/Alu	(7)	305	2	1702391
182	27.9	3.2	0.0	chr18	9070681	9070741	(71302544)	C	MIRc	SINE/MIR	(89)	179	117	1702392
2462	9.4	0.0	0.0	chr18	9070958	9071265	(71302020)	+	AluSp	SINE/Alu	1	308	(5)	1702393
12789	10.3	1.6	2.5	chr18	10104522	10105891	(70267394)	C	L1PA16	LINE/L1	(5)	6161	4793	1704140
2272	13.8	8.4	1.0	chr18	10105892	10106287	(70266998)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1704141
15753	13.5	3.8	3.2	chr18	13304959	13307427	(67065858)	+	Tigger2	DNA/TcMar-Tigger	2	2493	(225)	1708923
1319	15.8	9.2	8.2	chr18	14082681	14082972	(66290313)	C	AluJr	SINE/Alu	(17)	295	1	1709869
2249	12.5	0.0	0.0	chr18	14083068	14083371	(66289914)	+	AluSz6	SINE/Alu	1	304	(8)	1709870
482	27.4	4.0	8.1	chr18	21604718	21604951	(58768334)	C	MLT1K	LTR/ERVL-MaLR	(2)	593	370	1712896
2046	20.5	5.2	2.2	chr18	23198446	23198934	(57174351)	+	MLT1D	LTR/ERVL-MaLR	2	505	(0)	1715784
2365	7.1	0.0	0.0	chr18	23525440	23525722	(56847563)	C	AluSc5	SINE/Alu	(26)	283	1	1716383
1228	12.0	0.0	12.0	chr18	23525723	23525765	(56847520)	C	AluJr	SINE/Alu	(187)	125	92	1716382
293	10.4	4.0	0.0	chr18	23525876	23525923	(56847362)	+	MER105	DNA/hAT-Charlie	26	75	(128)	1716384
352	26.4	1.3	11.4	chr18	23525957	23526123	(56847162)	+	MER105	DNA/hAT-Charlie	52	201	(2)	1716385
2645	12.7	1.2	0.0	chr18	23801503	23801911	(56571374)	C	L1MA5	LINE/L1	(606)	5697	5284	1716884
10612	19.8	7.2	2.9	chr18	23801912	23802050	(56571235)	C	ERVL-E-int	LTR/ERVL	(316)	5351	5234	1716883
1191	17.9	4.7	0.0	chr18	23802051	23802274	(56571011)	+	Tigger4a	DNA/TcMar-Tigger	2	236	(0)	1716886
10612	19.8	7.2	2.9	chr18	23802275	23804383	(56568902)	C	ERVL-E-int	LTR/ERVL	(434)	5233	2999	1716883
3921	17.4	4.0	0.3	chr18	26322476	26323333	(54049952)	C	L1M4c	LINE/L1	(2726)	3656	2766	1720729
1267	14.1	0.0	8.6	chr18	26323343	26323576	(54049709)	C	AluJr	SINE/Alu	(13)	299	86	1720730
1159	18.2	12.2	1.7	chr18	26323597	26324149	(54049136)	C	L1M4c	LINE/L1	(3636)	2740	2117	1720729
1766	19.1	0.7	0.3	chr18	26626471	26626773	(53746512)	C	AluJb	SINE/Alu	(7)	305	2	1721238
686	28.8	5.9	4.0	chr18	26626774	26626923	(53746362)	C	L2a	LINE/L2	(293)	3133	2980	1721237
203	37.2	5.0	1.1	chr18	30288974	30289068	(50084217)	C	L2c	LINE/L2	(264)	3123	3025	1726130
573	23.0	7.0	4.9	chr18	30289087	30289269	(50084016)	+	MER5A	DNA/hAT-Charlie	2	188	(1)	1726131
4078	13.6	0.5	0.0	chr18	31146095	31146720	(49226565)	C	L1PA17	LINE/L1	(16)	6150	5522	1727275
314	27.8	13.9	2.6	chr18	31892317	31892751	(48480534)	C	L1MC4a	LINE/L1	(1991)	5891	5438	1728369
1657	17.9	3.4	0.7	chr18	31892752	31893041	(48480244)	+	AluJo	SINE/Alu	10	307	(5)	1728370
314	29.6	14.0	3.9	chr18	31893042	31893147	(48480138)	C	L1MC4a	LINE/L1	(2445)	5437	5327	1728369
2208	9.3	4.0	0.0	chr18	33673374	33673662	(46699623)	C	AluSq	SINE/Alu	(12)	301	1	1731015
1443	16.4	4.3	2.9	chr18	33904333	33904609	(46468676)	+	MER49	LTR/ERV1	1	281	(642)	1731269
693	19.4	5.0	0.0	chr18	33904598	33904731	(46468554)	+	MER49	LTR/ERV1	611	751	(172)	1731269
542	30.4	9.1	7.2	chr18	33904987	33905483	(46467802)	+	LOR1-int	LTR/ERV1	7166	7672	(448)	1731268
2023	18.6	1.6	1.1	chr18	33974452	33974821	(46398464)	C	Tigger1	DNA/TcMar-Tigger	(2046)	372	1	1731356
2657	17.1	3.5	0.8	chr18	33974822	33975329	(46397956)	+	L1MB2	LINE/L1	5647	6168	(3)	1731355
597	29.1	9.1	0.4	chr18	34690834	34691064	(45682221)	C	MIR	SINE/MIR	(8)	254	2	1732281
352	25.8	15.1	0.0	chr18	34691353	34691476	(45681809)	+	MIRb	SINE/MIR	80	225	(43)	1732282
407	36.9	3.5	2.2	chr18	34729128	34729350	(45643935)	C	MIRb	SINE/MIR	(40)	228	2	1732329
398	31.0	5.3	5.3	chr18	35038565	35038809	(45334476)	C	LTR81C	LTR/Gypsy	(907)	246	2	1732778
187	29.7	8.3	4.0	chr18	39642494	39642605	(40730680)	C	MIRc	SINE/MIR	(121)	147	35	1738983
911	20.1	2.4	1.0	chr18	39642623	39642828	(40730457)	+	MER3	DNA/hAT-Charlie	1	209	(0)	1738984
661	20.2	8.5	6.3	chr18	40402612	40402817	(39970468)	C	OldhAT1	DNA/hAT-Ac	(904)	1944	1734	1739956
338	32.2	14.9	2.7	chr18	40492385	40492719	(39880566)	+	L3	LINE/CR1	3643	4025	(74)	1740084
3453	18.3	5.3	3.7	chr18	47297439	47298165	(33075120)	C	L1MB4	LINE/L1	(20)	6160	5422	1749969
314	26.1	3.8	5.7	chr18	48543992	48544150	(31829135)	+	Charlie4z	DNA/hAT-Charlie	6	131	(36)	1752083
525	25.1	6.6	4.3	chr18	48544227	48544434	(31828851)	C	MIRc	SINE/MIR	(31)	237	25	1752084
808	22.3	10.7	9.9	chr18	48629295	48629719	(31743566)	C	L1MC4	LINE/L1	(5)	8037	7618	1752221
203	29.6	6.9	1.2	chr18	50532522	50532603	(29840682)	C	MamTip2	DNA/hAT-Tip100	(33)	272	186	1755295
519	33.0	13.5	3.8	chr18	50532615	50533376	(29839909)	C	L2c	LINE/L2	(10)	3416	2582	1755296
987	15.4	5.6	17.1	chr18	50855083	50855224	(29518061)	+	AluSz6	SINE/Alu	2	132	(180)	1755872
1693	15.3	3.5	3.1	chr18	50899332	50899619	(29473666)	+	AluJr	SINE/Alu	2	290	(22)	1755976
355	12.0	0.0	0.0	chr18	50899620	50899669	(29473616)	+	MER1B	DNA/hAT-Charlie	290	339	(0)	1755977
233	29.9	13.7	10.5	chr18	50899670	50899908	(29473377)	+	L2b	LINE/L2	3140	3387	(0)	1755978
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
3889	17.4	0.4	2.0	chr18	57054179	57054893	(23318392)	C	L1MB2	LINE/L1	(177)	5994	5291	1764992
2220	9.8	2.7	0.0	chr18	58802509	58802794	(21570491)	C	AluSx1	SINE/Alu	(18)	294	1	1767890
20974	9.8	2.7	2.0	chr18	59205965	59207291	(21165994)	+	MER61-int	LTR/ERV1	3826	5159	(58)	1768605
1899	12.9	0.0	0.8	chr18	59207292	59207554	(21165731)	+	AluSx3	SINE/Alu	37	297	(14)	1768607
47760	12.0	2.6	1.3	chr18	61707390	61715042	(18658243)	+	PRIMA41-int	LTR/ERV1	3	7756	(0)	1772348
569	27.9	14.1	3.6	chr18	62402195	62402573	(17970712)	+	LTR33	LTR/ERVL	1	420	(95)	1773400
1747	20.1	4.1	2.6	chr18	62402574	62402957	(17970328)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	1773401
633	28.1	2.7	3.0	chr18	69268266	69268529	(11104756)	C	X2_LINE	LINE/CR1	(1068)	340	78	1782953
2767	10.2	1.2	0.0	chr18	69275470	69275879	(11097406)	C	L1PA14	LINE/L1	(0)	6161	5747	1782961
1418	26.4	5.5	2.2	chr18	69275886	69276551	(11096734)	C	MER65-int	LTR/ERV1	(520)	4416	3264	1782960
378	28.9	13.2	6.7	chr18	74277476	74277850	(6095435)	C	L2c	LINE/L2	(4)	3383	2981	1789670
361	27.9	5.8	3.0	chr18	74278037	74278169	(6095116)	C	MIR	SINE/MIR	(10)	252	116	1789671
13	11.9	0.0	6.2	chr18	77132764	77132795	(3240490)	+	(GGC)n	Simple_repeat	1	32	(0)	1793102
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
577	27.2	17.1	5.5	chr18	79676190	79676225	(697060)	+	MER46C	DNA/TcMar-Tigger	1	37	(301)	1795681
1927	14.3	2.8	1.4	chr18	79676226	79676511	(696774)	C	AluJb	SINE/Alu	(22)	290	1	1795682
577	27.2	17.1	5.5	chr18	79676512	79676766	(696519)	+	MER46C	DNA/TcMar-Tigger	38	333	(5)	1795681
378	20.0	7.1	8.4	chr19	1437664	1437750	(57179866)	C	L1M4b	LINE/L1	(4021)	2846	2755	1798775
919	16.2	5.5	7.3	chr19	1437759	1437962	(57179654)	C	AluJb	SINE/Alu	(21)	291	92	1798777
201	17.5	0.0	7.0	chr19	1438094	1438136	(57179480)	+	L2c	LINE/L2	3338	3377	(10)	1798778
189	32.6	2.2	0.0	chr19	1438118	1438212	(57179404)	C	MIR3	SINE/MIR	(80)	182	83	1798779
1024	17.0	0.0	0.6	chr19	1596761	1596925	(57020691)	+	AluSx	SINE/Alu	141	304	(8)	1799107
354	14.1	0.0	3.0	chr19	1596926	1596991	(57020625)	+	MLT1B	LTR/ERVL-MaLR	327	390	(0)	1799108
419	10.6	8.3	0.0	chr19	1597041	1597106	(57020510)	C	Alu	SINE/Alu	(15)	296	225	1799109
708	17.7	3.0	0.8	chr19	1597205	1597334	(57020282)	C	FLAM_C	SINE/Alu	(10)	133	1	1799110
1480	23.3	7.1	1.2	chr19	1597356	1597872	(57019744)	+	MLT1F	LTR/ERVL-MaLR	1	552	(8)	1799111
234	26.5	22.2	1.9	chr19	3839693	3839846	(54777770)	C	L1ME3Cz	LINE/L1	(88)	909	716	1804124
642	10.8	1.0	3.9	chr19	3839851	3839952	(54777664)	C	FRAM	SINE/Alu	(12)	164	66	1804125
2911	0.3	0.0	0.0	chr19	3994564	3994873	(54622743)	+	AluYa5	SINE/Alu	1	310	(1)	1804507
983	18.4	3.3	6.0	chr19	3994920	3995038	(54622578)	+	AluJr	SINE/Alu	1	125	(187)	1804508
2257	9.7	0.0	1.0	chr19	3995039	3995338	(54622278)	C	AluSc	SINE/Alu	(12)	297	1	1804509
419	23.4	2.3	1.5	chr19	4539011	4539140	(54078476)	+	L2c	LINE/L2	2635	2765	(654)	1805818
28017	7.6	1.3	1.3	chr19	5159634	5165376	(53452240)	C	HERV9-int	LTR/ERV1	(3458)	4978	29	1807255
1795	14.7	0.3	6.1	chr19	6556869	6557194	(52060422)	C	AluJo	SINE/Alu	(0)	312	6	1810570
198	28.1	7.9	2.4	chr19	6557197	6557280	(52060336)	C	L2a	LINE/L2	(35)	3391	3303	1810571
231	18.3	5.3	2.7	chr19	6699144	6699216	(51918400)	+	Charlie5	DNA/hAT-Charlie	2226	2300	(324)	1810940
29	0.0	5.1	2.4	chr19	6699217	6699255	(51918361)	+	(CTTTT)n	Simple_repeat	1	41	(0)	1810941
767	15.2	0.8	0.0	chr19	6699256	6699373	(51918243)	C	AluSz6	SINE/Alu	(193)	119	1	1810942
464	10.3	0.0	2.5	chr19	6699374	6699453	(51918163)	+	Charlie5	DNA/hAT-Charlie	2290	2367	(257)	1810943
1015	11.7	0.0	0.0	chr19	6699457	6699593	(51918023)	+	AluSz	SINE/Alu	2	138	(174)	1810944
455	18.3	0.0	0.0	chr19	6699598	6699668	(51917948)	+	AluJo	SINE/Alu	233	303	(9)	1810945
416	18.8	4.7	0.0	chr19	6699669	6699769	(51917847)	+	Charlie5	DNA/hAT-Charlie	2358	2463	(161)	1810946
178	21.1	4.0	5.0	chr19	6699872	6700522	(51917094)	+	(ATATATA)n	Simple_repeat	1	677	(0)	1810947
775	20.0	0.0	0.0	chr19	7279182	7279306	(51338310)	+	FLAM_C	SINE/Alu	5	129	(14)	1812495
1668	17.3	2.5	1.1	chr19	7279706	7279983	(51337633)	+	AluJb	SINE/Alu	14	295	(17)	1812496
1973	13.2	0.3	1.4	chr19	8110070	8110358	(50507258)	C	AluJr	SINE/Alu	(26)	286	1	1814418
1061	21.9	0.0	2.4	chr19	8110389	8110599	(50507017)	+	MER58A	DNA/hAT-Charlie	1	206	(18)	1814419
180	27.3	0.0	1.8	chr19	8110732	8110787	(50506829)	C	L2a	LINE/L2	(280)	3146	3092	1814420
40221	6.0	0.9	1.1	chr19	8379915	8385620	(50231996)	+	HERV9NC-int	LTR/ERV1	4	5199	(919)	1815187
331	23.4	3.4	1.0	chr19	11060669	11060767	(47556849)	+	MIRc	SINE/MIR	57	152	(56)	1821319
1133	14.7	0.0	0.0	chr19	11061042	11061204	(47556412)	+	AluJb	SINE/Alu	137	299	(13)	1821320
325	30.7	15.0	1.1	chr19	13048019	13048196	(45569420)	C	MIR	SINE/MIR	(59)	209	3	1825805
468	23.4	7.7	2.3	chr19	13942128	13942298	(44675318)	C	MLT1K	LTR/ERVL-MaLR	(9)	586	406	1828170
472	23.8	3.9	0.8	chr19	13942342	13942464	(44675152)	C	MLT1K	LTR/ERVL-MaLR	(300)	295	169	1828170
17	12.0	2.6	2.6	chr19	13942535	13942572	(44675044)	+	(CTGTC)n	Simple_repeat	1	39	(0)	1828171
295	35.7	5.8	0.0	chr19	13942590	13942687	(44674929)	+	L2b	LINE/L2	3265	3368	(7)	1828172
1973	10.9	0.7	5.6	chr19	13942713	13943014	(44674602)	+	AluSx	SINE/Alu	12	298	(14)	1828173
273	35.3	5.0	1.5	chr19	16421558	16421692	(42195924)	C	MIRc	SINE/MIR	(44)	224	85	1833891
2168	12.4	2.9	0.0	chr19	16783930	16784227	(41833389)	+	AluSx	SINE/Alu	1	307	(5)	1834768
783	17.1	4.2	1.4	chr19	16784242	16784381	(41833235)	+	AluJb	SINE/Alu	154	297	(15)	1834769
600	16.7	0.0	0.0	chr19	16784397	16784492	(41833124)	+	MER2	DNA/TcMar-Tigger	210	305	(40)	1834770
470	21.7	6.2	0.0	chr19	16784496	16784615	(41833001)	C	L2a	LINE/L2	(274)	3101	2974	1834754
1195	17.5	2.2	7.3	chr19	16784623	16784648	(41832968)	+	L1MB5	LINE/L1	5866	5886	(288)	1834771
2499	7.7	0.0	1.3	chr19	16784649	16784961	(41832655)	+	AluSc	SINE/Alu	1	309	(0)	1834772
1084	26.1	17.5	0.0	chr19	18475293	18475782	(40141834)	+	L1MB7	LINE/L1	5423	6016	(168)	1838931
655	29.9	12.0	8.5	chr19	19439328	19439565	(39178051)	+	L1MC5a	LINE/L1	85	350	(2427)	1840993
3071	22.6	5.8	1.4	chr19	19719066	19720341	(38897275)	+	L1MCa	LINE/L1	1766	3167	(3397)	1841512
1769	8.2	1.7	1.2	chr19	20711439	20711765	(37905851)	C	HERVK14-int	LTR/ERVK	(631)	5465	5101	1843030
5587	8.9	0.0	0.4	chr19	20711747	20712494	(37905122)	C	HERVK14-int	LTR/ERVK	(3648)	2448	1704	1843030
602	29.1	28.9	1.9	chr19	29467803	29468159	(29149457)	C	LTR16A2	LTR/ERVL	(39)	450	1	1850275
824	27.2	11.9	2.4	chr19	31107607	31108024	(27509592)	C	Tigger13a	DNA/TcMar-Tigger	(151)	620	158	1852744
567	29.1	2.8	5.4	chr19	32270704	32270888	(26346728)	C	MLT1K	LTR/ERVL-MaLR	(317)	278	99	1854506
1506	27.0	12.8	1.8	chr19	32271443	32272064	(26345552)	C	L1ME3A	LINE/L1	(6)	6167	5467	1854507
2098	17.9	5.6	4.3	chr19	33758787	33759206	(24858410)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1857266
560	10.3	2.5	0.0	chr19	34678152	34678229	(23939387)	C	AluSz	SINE/Alu	(224)	88	9	1858989
1618	10.4	0.5	1.4	chr19	34678230	34678450	(23939166)	+	AluSx3	SINE/Alu	82	300	(11)	1858990
3933	9.6	2.5	1.1	chr19	34721933	34722488	(23895128)	+	LTR6A	LTR/ERV1	1	564	(0)	1859045
1343	9.7	3.8	0.0	chr19	35892384	35892559	(22725057)	+	AluSc8	SINE/Alu	115	297	(14)	1861386
187	34.9	3.1	6.0	chr19	35892614	35892814	(22724802)	+	L2c	LINE/L2	3084	3278	(109)	1861387
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
1969	14.7	0.3	2.9	chr19	38929275	38929581	(19688035)	+	AluJo	SINE/Alu	3	301	(11)	1867781
788	25.3	1.0	1.0	chr19	38929584	38929775	(19687841)	+	MIR	SINE/MIR	28	219	(43)	1867782
1129	32.9	7.8	7.8	chr19	39949248	39951171	(18666445)	C	PRIMA41-int	LTR/ERV1	(4128)	3628	1206	1869980
1366	20.5	1.0	4.2	chr19	40033052	40033357	(18584259)	C	Tigger1	DNA/TcMar-Tigger	(2102)	316	21	1870150
2093	9.5	2.7	2.7	chr19	40886592	40886886	(17730730)	C	AluSq2	SINE/Alu	(17)	296	2	1872161
1403	23.3	7.6	7.0	chr19	44007901	44008357	(14609259)	C	MER70A	LTR/ERVL	(2)	470	11	1878053
2154	21.2	3.6	0.4	chr19	44057804	44058258	(14559358)	C	MER70A	LTR/ERVL	(2)	470	1	1878134
5957	21.5	6.9	0.9	chr19	44058265	44060090	(14557526)	C	MER70-int	LTR/ERVL	(0)	5023	3085	1878134
1192	10.6	0.3	0.0	chr19	44456469	44457877	(14159739)	C	ACRO1	Satellite/acro	(55)	1412	1	1878760
307	23.8	0.0	0.0	chr19	45307128	45307190	(13310426)	+	MIR	SINE/MIR	3	65	(197)	1880957
224	26.3	0.0	3.4	chr19	45307193	45307251	(13310365)	C	MIR3	SINE/MIR	(60)	148	92	1880958
2316	12.1	0.0	0.0	chr19	46670453	46670758	(11946858)	+	AluSz	SINE/Alu	1	306	(6)	1884257
1615	14.8	2.7	8.0	chr19	46671206	46671336	(11946280)	+	AluJr	SINE/Alu	1	128	(184)	1884258
1881	13.5	4.2	0.7	chr19	46767448	46767721	(11849895)	C	AluSx3	SINE/Alu	(27)	284	1	1884490
2171	10.7	2.4	0.0	chr19	47155750	47156038	(11461578)	C	AluSc	SINE/Alu	(13)	296	1	1885412
1269	16.7	0.5	1.8	chr19	47156069	47156295	(11461321)	+	AluJr	SINE/Alu	84	307	(5)	1885413
1332	10.5	0.0	0.6	chr19	47156308	47156488	(11461128)	+	AluSc	SINE/Alu	111	290	(19)	1885414
438	27.8	0.9	0.0	chr19	47823146	47823253	(10794363)	+	L2a	LINE/L2	3318	3426	(0)	1887157
272	31.7	0.0	0.0	chr19	48504902	48504983	(10112633)	+	L2a	LINE/L2	3027	3108	(318)	1888895
16	29.1	0.0	0.0	chr19	48505050	48505081	(10112535)	+	(TTTCTC)n	Simple_repeat	1	54	(0)	1888896
20	0.0	0.0	0.0	chr19	48505082	48505103	(10112513)	+	(TC)n	Simple_repeat	1	22	(0)	1888897
2189	11.0	0.0	0.0	chr19	48505104	48505412	(10112204)	C	AluSx	SINE/Alu	(0)	312	2	1888898
2559	6.8	0.0	0.3	chr19	49067891	49068199	(9549417)	C	AluY	SINE/Alu	(3)	308	1	1890299
2050	15.4	0.0	0.0	chr19	49068313	49068611	(9549005)	C	AluJb	SINE/Alu	(12)	300	2	1890300
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
791	13.8	0.0	0.0	chr19	50894785	50894893	(7722723)	+	AluSx	SINE/Alu	127	235	(77)	1894534
12	14.8	0.0	5.9	chr19	50895299	50895332	(7722284)	+	G-rich	Low_complexity	1	34	(0)	1894535
3308	9.6	0.7	0.2	chr19	50895356	50895806	(7721810)	+	MLT2A2	LTR/ERVL	1	453	(0)	1894536
1754	15.8	3.3	6.5	chr19	51685318	51685538	(6932078)	C	Tigger4b	DNA/TcMar-Tigger	(1)	360	143	1896041
1581	16.2	8.4	1.8	chr19	51685539	51685815	(6931801)	C	AluJb	SINE/Alu	(15)	297	1	1896042
1265	10.8	1.7	1.1	chr19	54247814	54248025	(4369591)	+	MLT2A2	LTR/ERVL	336	561	(0)	1901373
326	29.1	1.9	1.9	chr2	3173989	3174093	(239019436)	+	L2c	LINE/L2	3280	3384	(3)	1914157
838	25.4	1.3	13.1	chr2	9604512	9604778	(232588751)	+	MER8	DNA/TcMar-Tigger	1	235	(4)	1923271
197	14.9	9.6	0.0	chr2	9604910	9604956	(232588573)	+	L2a	LINE/L2	3370	3421	(5)	1923272
340	28.5	7.1	0.8	chr2	10423234	10423387	(231770142)	+	MIRc	SINE/MIR	20	187	(43)	1924745
1759	29.8	4.9	2.9	chr2	10515854	10516443	(231677086)	C	L1ME3A	LINE/L1	(5794)	1309	707	1924895
2326	11.2	0.0	0.3	chr2	10516444	10516747	(231676782)	C	AluSc	SINE/Alu	(6)	303	1	1924899
1759	29.8	4.9	2.9	chr2	10516748	10517029	(231676500)	C	L1ME3A	LINE/L1	(6397)	706	418	1924895
1944	16.5	0.0	0.3	chr2	11745427	11745717	(230447812)	+	AluJo	SINE/Alu	1	290	(22)	1927195
604	30.7	7.6	4.6	chr2	11745718	11745933	(230447596)	+	L2b	LINE/L2	2853	3140	(235)	1927194
1621	14.9	5.5	0.0	chr2	15875859	15876099	(226317430)	+	AluSx1	SINE/Alu	1	255	(57)	1933481
1836	17.1	0.7	0.3	chr2	15876142	15876434	(226317095)	C	AluJo	SINE/Alu	(18)	294	1	1933482
247	33.5	3.9	0.7	chr2	15876590	15876739	(226316790)	C	MIRc	SINE/MIR	(33)	235	81	1933483
274	26.9	5.1	1.1	chr2	15876757	15876850	(226316679)	C	MIRb	SINE/MIR	(28)	240	143	1933484
1464	26.0	3.4	6.4	chr2	15876861	15877435	(226316094)	+	L1MC5	LINE/L1	4637	5193	(953)	1933485
2307	11.8	0.7	0.0	chr2	16359279	16359584	(225833945)	C	AluSp	SINE/Alu	(5)	308	1	1934391
942	27.9	0.0	0.0	chr2	21398964	21399178	(220794351)	C	MER58A	DNA/hAT-Charlie	(1)	223	9	1941695
2387	12.9	1.3	1.0	chr2	23365939	23366328	(218827201)	+	L1PB3	LINE/L1	5757	6147	(7)	1944286
1577	23.1	8.7	10.2	chr2	23366329	23366690	(218826839)	+	L1ME3A	LINE/L1	1604	1951	(4291)	1944283
337	26.3	2.2	16.4	chr2	23366720	23366891	(218826638)	+	MER58C	DNA/hAT-Charlie	31	175	(40)	1944287
264	29.9	7.2	2.9	chr2	24301397	24301523	(217892006)	+	MIR3	SINE/MIR	31	163	(105)	1945820
1894	16.4	1.3	0.3	chr2	24301524	24301822	(217891707)	C	AluJr4	SINE/Alu	(10)	302	1	1945821
253	36.8	6.2	2.9	chr2	24301823	24301834	(217891695)	+	MIRc	SINE/MIR	164	175	(93)	1945820
692	26.2	10.1	3.6	chr2	25568735	25569307	(216624222)	+	MLT1G	LTR/ERVL-MaLR	22	595	(0)	1948155
4604	21.6	6.4	1.5	chr2	26329701	26331012	(215862517)	C	L1MD2	LINE/L1	(5264)	1376	1	1949747
994	20.1	5.3	0.7	chr2	26330987	26331271	(215862258)	C	L1MEg	LINE/L1	(3166)	2980	2682	1949751
1939	30.9	11.2	3.8	chr2	26788975	26790005	(215403524)	+	L2	LINE/L2	1788	2906	(513)	1950616
496	32.0	11.0	1.5	chr2	27798230	27798641	(214394888)	+	L2c	LINE/L2	2330	2785	(634)	1952513
191	31.2	13.9	2.1	chr2	27798775	27798869	(214394660)	+	L2c	LINE/L2	3031	3138	(249)	1952513
221	35.3	0.7	5.7	chr2	28684696	28684854	(213508675)	+	L2c	LINE/L2	3018	3168	(219)	1953998
513	21.1	0.0	1.1	chr2	28934636	28934725	(213258804)	+	AluJb	SINE/Alu	201	289	(23)	1954517
2020	16.2	2.9	0.0	chr2	32604880	32605182	(209588347)	C	AluSz	SINE/Alu	(0)	312	1	1960600
750	18.2	4.6	14.6	chr2	32605183	32605249	(209588280)	C	L1PREC2	LINE/L1	(138)	6030	5973	1960599
2331	11.4	0.0	0.3	chr2	32776602	32776909	(209416620)	C	AluSz	SINE/Alu	(5)	307	1	1960939
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
188	29.6	15.5	1.0	chr2	36383552	36383650	(205809879)	C	L2b	LINE/L2	(0)	3426	3311	1965990
229	36.3	3.3	4.6	chr2	36383732	36383884	(205809645)	C	L2b	LINE/L2	(227)	3148	2998	1965990
1154	26.1	7.6	0.8	chr2	36383885	36384277	(205809252)	C	L2a	LINE/L2	(5)	3421	3000	1965991
242	33.1	12.1	2.4	chr2	36434818	36435071	(205758458)	+	L2a	LINE/L2	3021	3302	(85)	1966053
637	32.4	7.5	2.6	chr2	37127128	37127741	(205065788)	+	L2b	LINE/L2	2568	3211	(164)	1967191
46861	8.0	0.9	0.8	chr2	37128733	37130096	(205063433)	+	HERVFH19-int	LTR/ERV1	1493	2863	(4856)	1967195
1280	8.7	0.6	0.0	chr2	38667689	38667849	(203525680)	+	AluSx1	SINE/Alu	134	295	(17)	1969678
2064	13.1	9.0	6.0	chr2	38667852	38668189	(203525340)	+	MER39	LTR/ERV1	258	615	(92)	1969679
959	18.6	0.0	0.6	chr2	38668190	38668350	(203525179)	C	FRAM	SINE/Alu	(16)	160	1	1969680
50	27.9	2.1	0.0	chr2	42441684	42441825	(199751704)	+	(TA)n	Simple_repeat	1	145	(0)	1975552
239	31.7	2.1	10.3	chr2	42441904	42442058	(199751471)	C	L2c	LINE/L2	(47)	3340	3199	1975553
12	13.5	2.8	5.4	chr2	42442136	42442171	(199751358)	+	(CAATA)n	Simple_repeat	1	37	(0)	1975554
200	28.8	2.9	0.0	chr2	42442443	42442508	(199751021)	+	MIR3	SINE/MIR	110	177	(31)	1975555
37663	16.4	2.0	3.6	chr2	47583174	47591063	(194602466)	C	HERVH-int	LTR/ERV1	(0)	7713	1	1984363
217	26.3	2.6	1.3	chr2	54418177	54418253	(187775276)	C	MIRc	SINE/MIR	(2)	266	189	1994338
1684	15.9	5.2	3.3	chr2	55011025	55011326	(187182203)	C	AluJo	SINE/Alu	(4)	308	1	1995130
229	31.4	0.0	0.0	chr2	59293927	59293977	(182899552)	C	L2c	LINE/L2	(65)	3322	3272	2000943
284	29.1	14.7	0.8	chr2	60047498	60047625	(182145904)	+	MIR3	SINE/MIR	4	139	(129)	2001908
2380	10.4	0.0	0.0	chr2	60838137	60838443	(181355086)	C	AluSz	SINE/Alu	(0)	312	6	2003174
1079	22.1	5.5	3.7	chr2	60838444	60838781	(181354748)	+	MER39	LTR/ERV1	191	695	(12)	2003173
2294	11.8	0.0	0.0	chr2	61047149	61047453	(181146076)	C	AluSg	SINE/Alu	(5)	305	1	2003551
2035	10.4	0.3	6.7	chr2	61528353	61528668	(180664861)	+	AluSx4	SINE/Alu	1	296	(14)	2004511
56	0.0	0.0	0.0	chr2	61528734	61528781	(180664748)	+	(TA)n	Simple_repeat	1	48	(0)	2004512
1771	16.1	0.0	6.1	chr2	61880714	61881024	(180312505)	C	AluJo	SINE/Alu	(20)	292	1	2005386
1094	31.3	16.3	10.5	chr2	62190283	62191509	(180002020)	+	L2b	LINE/L2	672	2068	(1351)	2006013
3247	18.7	9.7	6.0	chr2	62731822	62732380	(179461149)	C	L1MC2	LINE/L1	(4733)	2018	1466	2006930
2296	13.7	7.7	0.5	chr2	62732381	62732777	(179460752)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2006933
3883	17.3	3.0	3.3	chr2	63128966	63129471	(179064058)	C	L1MB3	LINE/L1	(209)	6563	6039	2007478
236	12.5	0.0	0.0	chr2	63129472	63129503	(179064026)	+	U2	snRNA	1	32	(156)	2007480
3883	17.3	3.0	3.3	chr2	63129504	63129705	(179063824)	C	L1MB3	LINE/L1	(209)	6038	5828	2007478
2069	15.1	0.3	0.3	chr2	63855530	63855841	(178337688)	C	AluJb	SINE/Alu	(0)	312	1	2008449
1799	16.4	0.7	3.1	chr2	64721592	64721908	(177471621)	+	AluJr4	SINE/Alu	1	309	(3)	2009835
5763	16.4	7.8	7.7	chr2	64721909	64722810	(177470719)	+	Charlie1a	DNA/hAT-Charlie	592	1455	(0)	2009834
2325	9.3	0.0	2.9	chr2	64753015	64753325	(177440204)	+	AluSx	SINE/Alu	1	302	(10)	2009880
211	41.2	1.7	0.9	chr2	64753665	64753779	(177439750)	+	MER5A	DNA/hAT-Charlie	68	183	(6)	2009881
1607	19.3	3.6	0.3	chr2	66373569	66373864	(175819665)	+	AluJr	SINE/Alu	1	306	(6)	2012716
325	23.3	5.7	1.7	chr2	66373990	66374107	(175819422)	C	UCON41	Unknown	(15)	124	2	2012717
1180	11.3	5.1	0.0	chr2	67928820	67928990	(174264539)	+	MER34B	LTR/ERV1	349	529	(36)	2014771
794	24.2	8.9	5.6	chr2	67928991	67929522	(174264007)	C	LTR48	LTR/ERV1	(0)	787	1	2014773
824	25.8	2.5	3.8	chr2	68369122	68369359	(173824170)	C	MIR	SINE/MIR	(22)	240	6	2015517
791	6.5	0.0	0.0	chr2	68369483	68369575	(173823954)	C	AluSq2	SINE/Alu	(12)	301	209	2015518
2098	14.1	0.0	0.0	chr2	69652577	69652875	(172540654)	+	AluSx1	SINE/Alu	1	299	(13)	2017463
437	23.9	2.1	1.1	chr2	69653217	69653309	(172540220)	+	MER5C1	DNA/hAT-Charlie	5	98	(165)	2017464
770	19.8	3.3	5.8	chr2	69663493	69663680	(172529849)	+	AluJb	SINE/Alu	113	295	(17)	2017474
590	23.5	2.2	0.6	chr2	69663688	69663867	(172529662)	+	L1MEi	LINE/L1	1032	1214	(1293)	2017482
10836	15.7	3.2	0.5	chr2	69794782	69796464	(172397065)	C	HUERS-P3-int	LTR/ERV1	(4552)	4367	2637	2017771
3503	15.4	3.4	2.8	chr2	69909970	69910163	(172283366)	C	L1MB7	LINE/L1	(484)	5700	5512	2017990
445	27.4	10.8	0.5	chr2	69910179	69910369	(172283160)	+	L2a	LINE/L2	3214	3426	(0)	2017988
734	17.2	0.8	0.0	chr2	70080947	70081068	(172112461)	C	AluJo	SINE/Alu	(188)	124	2	2018332
397	28.6	8.3	2.0	chr2	70529026	70529228	(171664301)	+	L2a	LINE/L2	3206	3422	(4)	2019240
420	32.1	13.1	1.4	chr2	70529465	70529975	(171663554)	C	L2a	LINE/L2	(254)	3172	2592	2019241
560	25.6	11.1	0.0	chr2	74389672	74389847	(167803682)	+	MIRc	SINE/MIR	70	267	(1)	2025303
3469	22.2	5.7	5.3	chr2	77376216	77377272	(164816257)	C	L1MC3	LINE/L1	(16)	7769	6708	2029570
2775	26.1	3.9	4.9	chr2	79224329	79225357	(162968172)	C	L1ME2z	LINE/L1	(0)	6444	5426	2031977
42370	5.8	2.0	0.2	chr2	84471381	84477034	(157716495)	C	HERVK14-int	LTR/ERVK	(195)	5901	1	2039036
1598	19.3	1.0	0.0	chr2	84562550	84562834	(157630695)	C	MER68	LTR/ERVL	(26)	537	250	2039147
2224	9.4	10.1	4.2	chr2	84562838	84562873	(157630656)	C	L1P4	LINE/L1	(485)	5681	5646	2039148
2561	9.7	0.8	0.3	chr2	84562874	84563235	(157630294)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2039149
389	23.4	11.6	0.0	chr2	86022491	86022597	(156170932)	+	MER5B	DNA/hAT-Charlie	3	123	(55)	2041951
1677	17.1	3.1	0.4	chr2	86022599	86022879	(156170650)	C	AluJo	SINE/Alu	(23)	289	1	2041952
880	11.0	3.8	0.0	chr2	86022890	86023016	(156170513)	C	AluSx3	SINE/Alu	(16)	295	164	2041953
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
1891	14.6	0.0	1.7	chr2	96638705	96638998	(145554531)	+	AluJb	SINE/Alu	12	300	(12)	2052489
331	28.8	4.1	2.1	chr2	98459507	98459648	(143733881)	+	Tigger12	DNA/TcMar-Tigger	2327	2471	(4)	2055043
408	21.3	0.9	10.7	chr2	98459656	98459776	(143733753)	+	L2c	LINE/L2	3279	3387	(0)	2055044
4870	23.5	6.7	3.5	chr2	98701970	98703546	(143489983)	+	L1M4a2	LINE/L1	9	1583	(1073)	2055349
2452	7.1	0.0	0.3	chr2	99514768	99515064	(142678465)	+	AluY	SINE/Alu	1	296	(15)	2056576
418	33.9	5.0	8.2	chr2	99515065	99515466	(142678063)	C	ERV24B_Prim-int	LTR/ERV1	(4527)	2274	1876	2056574
1271	19.7	10.7	2.0	chr2	99515467	99515772	(142677757)	+	MER2B	DNA/TcMar-Tigger	1	336	(0)	2056577
418	33.9	5.0	8.2	chr2	99515773	99515954	(142677575)	C	ERV24B_Prim-int	LTR/ERV1	(4926)	1875	1709	2056574
429	21.5	0.0	2.1	chr2	101423940	101424034	(140769495)	C	Charlie4z	DNA/hAT-Charlie	(6)	161	69	2059567
364	26.4	12.7	2.6	chr2	105781518	105781743	(136411786)	+	MIR	SINE/MIR	2	253	(9)	2065490
198	34.5	0.0	0.0	chr2	105800327	105800410	(136393119)	+	MIRb	SINE/MIR	176	259	(9)	2065509
437	26.5	4.6	2.9	chr2	107657400	107657570	(134535959)	C	MamGypLTR2b	LTR/Gypsy	(19)	903	730	2068163
21	16.1	4.3	4.2	chr2	107657578	107657641	(134535888)	+	GA-rich	Low_complexity	1	64	(0)	2068164
1743	10.8	4.4	0.4	chr2	109732481	109732721	(132460808)	C	AluSx3	SINE/Alu	(14)	297	47	2071207
447	32.2	4.4	3.3	chr2	114998815	114998994	(127194535)	C	MLT1E2	LTR/ERVL-MaLR	(335)	292	111	2079232
341	30.7	10.5	1.3	chr2	119007675	119007908	(123185621)	+	L1ME4a	LINE/L1	5333	5590	(534)	2084546
408	26.8	12.2	7.7	chr2	119007966	119008382	(123185147)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	32	2084547
668	31.5	5.9	1.2	chr2	120872605	120872845	(121320684)	+	MIR	SINE/MIR	7	259	(3)	2087688
13	21.9	0.0	2.6	chr2	121340979	121341017	(120852512)	+	A-rich	Low_complexity	1	39	(0)	2088555
211	31.9	0.0	1.4	chr2	121341070	121341142	(120852387)	C	L2b	LINE/L2	(4)	3371	3300	2088556
350	17.6	0.0	0.0	chr2	121341394	121341444	(120852085)	C	AluSc8	SINE/Alu	(125)	186	136	2088557
70	4.9	2.4	0.0	chr2	125456583	125456667	(116736862)	+	(TA)n	Simple_repeat	1	87	(0)	2094633
1076	21.8	11.7	7.4	chr2	125456668	125456701	(116736828)	C	MLT1B	LTR/ERVL-MaLR	(357)	33	7	2094632
1834	17.7	1.0	0.7	chr2	127184820	127185119	(115008410)	C	AluJr	SINE/Alu	(11)	301	1	2097018
1736	22.6	3.4	16.9	chr2	127185120	127185328	(115008201)	C	L1MC5a	LINE/L1	(550)	2227	2020	2097016
205	26.4	3.6	0.0	chr2	129734987	129735039	(112458490)	+	L2a	LINE/L2	3370	3424	(2)	2100793
191	34.6	5.6	1.0	chr2	129735076	129735177	(112458352)	+	MIRb	SINE/MIR	110	216	(52)	2100794
3526	12.0	12.6	1.6	chr2	134719934	134720560	(107472969)	+	MER39	LTR/ERV1	1	706	(1)	2107800
818	28.4	12.4	4.3	chr2	134762617	134763168	(107430361)	+	MLT1L	LTR/ERVL-MaLR	1	603	(7)	2107870
251	23.2	0.0	13.9	chr2	134763174	134763288	(107430241)	C	MIRb	SINE/MIR	(157)	111	13	2107869
2763	18.8	4.2	8.5	chr2	135555326	135555744	(106637785)	+	L1MB8	LINE/L1	5401	5816	(362)	2109201
1652	18.7	3.9	0.0	chr2	135555745	135556017	(106637512)	+	AluJb	SINE/Alu	1	284	(28)	2109202
2967	18.6	4.1	8.5	chr2	135556018	135556400	(106637129)	+	L1MB8	LINE/L1	5817	6167	(11)	2109201
248	31.9	0.0	0.0	chr2	136283272	136283343	(105910186)	+	L2a	LINE/L2	3355	3426	(0)	2110437
15198	11.5	1.0	1.4	chr2	140159186	140161582	(102031947)	C	L1PA11	LINE/L1	(1029)	5117	2730	2115802
16	13.4	7.3	0.0	chr2	143266761	143266801	(98926728)	+	A-rich	Low_complexity	1	44	(0)	2119850
337	33.6	2.8	0.0	chr2	143266980	143267083	(98926446)	C	MLT1I	LTR/ERVL-MaLR	(207)	204	98	2119851
1422	27.4	7.8	11.0	chr2	146289027	146289429	(95904100)	C	ERV3-16A3_I-int	LTR/ERVL	(3614)	1612	1238	2123741
3226	12.7	4.1	10.2	chr2	146289430	146290076	(95903453)	C	MER4B	LTR/ERV1	(4)	606	1	2123743
540	29.4	18.6	2.1	chr2	152861379	152861753	(89331776)	C	LTR16A	LTR/ERVL	(0)	451	1	2133068
231	30.2	1.6	4.5	chr2	152861755	152861820	(89331709)	C	MIRc	SINE/MIR	(184)	84	21	2133069
664	27.6	1.5	10.2	chr2	152861822	152862115	(89331414)	C	L2a	LINE/L2	(1)	3425	3158	2133070
2515	9.6	0.0	0.3	chr2	156431886	156432187	(85761342)	C	AluSx	SINE/Alu	(11)	301	1	2137466
2072	13.9	4.2	5.2	chr2	156432255	156432619	(85760910)	C	L1PA17	LINE/L1	(1)	6165	5805	2137467
241	36.4	13.3	3.1	chr2	156543555	156543815	(85649714)	C	L2c	LINE/L2	(157)	3230	2939	2137626
225	25.9	16.1	2.2	chr2	156543840	156543977	(85649552)	+	Tigger16b	DNA/TcMar-Tigger	175	335	(1)	2137627
567	24.5	14.4	6.5	chr2	156544169	156544491	(85649038)	C	MLT1H	LTR/ERVL-MaLR	(184)	365	13	2137628
35	5.4	0.0	0.0	chr2	157807909	157807947	(84385582)	+	(TC)n	Simple_repeat	1	39	(0)	2139204
268	28.9	9.1	10.6	chr2	157808065	157808300	(84385229)	+	L2a	LINE/L2	3179	3410	(16)	2139205
4166	18.0	2.2	6.2	chr2	159694366	159695743	(82497786)	C	L1MB7	LINE/L1	(57)	6127	4798	2141978
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
619	18.6	0.5	0.0	chr2	161281902	161282139	(80911390)	+	ACRO1	Satellite/acro	1	239	(5)	2144211
1573	18.4	6.3	3.7	chr2	168454566	168454920	(73738609)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	2153579
3241	25.3	11.0	2.0	chr2	168454921	168455106	(73738423)	C	L2a	LINE/L2	(1378)	2041	1845	2153578
30	0.0	0.0	0.0	chr2	168455129	168455154	(73738375)	+	(TG)n	Simple_repeat	1	26	(0)	2153580
32	3.0	0.0	0.0	chr2	168455506	168455539	(73737990)	+	(ATC)n	Simple_repeat	1	34	(0)	2153581
1818	15.8	4.3	3.0	chr2	172497224	172497520	(69696009)	+	AluJb	SINE/Alu	1	301	(11)	2160251
233	25.8	0.0	0.0	chr2	174044288	174044349	(68149180)	+	L1MC5	LINE/L1	7738	7799	(1505)	2162620
1591	21.3	9.0	0.6	chr2	174044373	174044841	(68148688)	+	L1MC5a	LINE/L1	6696	7028	(1014)	2162615
383	29.7	8.6	1.4	chr2	174680845	174680984	(67512545)	C	MIRc	SINE/MIR	(50)	218	68	2163674
195	35.7	6.0	5.3	chr2	175801933	175802065	(66391464)	C	L2b	LINE/L2	(1)	3374	3241	2165250
2311	10.0	0.0	0.0	chr2	176210196	176210485	(65983044)	C	AluSg	SINE/Alu	(20)	290	1	2165777
639	25.0	4.5	4.8	chr2	176210609	176210877	(65982652)	+	L1ME4c	LINE/L1	323	590	(240)	2165778
5466	24.7	6.3	2.6	chr2	176700364	176702604	(65490925)	C	L1MEf	LINE/L1	(3829)	2715	24	2166524
957	32.0	4.2	3.8	chr2	176984463	176984910	(65208619)	C	L2a	LINE/L2	(354)	3065	2616	2166906
776	30.6	9.9	4.8	chr2	177693186	177693595	(64499934)	+	LTR16E2	LTR/ERVL	130	560	(8)	2167965
399	30.1	9.9	2.4	chr2	177693713	177693879	(64499650)	+	MIR3	SINE/MIR	4	184	(24)	2167966
2883	24.1	4.9	6.1	chr2	178289464	178290505	(63903024)	C	L1MC5a	LINE/L1	(178)	2599	1572	2168883
462	21.2	1.7	1.7	chr2	178290505	178290619	(63902910)	C	L1ME3A	LINE/L1	(29)	6144	6030	2168884
1386	24.1	7.3	0.2	chr2	178290634	178291028	(63902501)	C	L1MC5a	LINE/L1	(1228)	1549	1125	2168883
606	24.0	10.5	0.0	chr2	178400595	178400790	(63792739)	C	L1ME1	LINE/L1	(1)	6178	5960	2169021
209	27.6	9.8	0.6	chr2	179686460	179686570	(62506959)	+	MIR3	SINE/MIR	29	155	(53)	2170504
1102	24.9	14.1	1.3	chr2	179922960	179923594	(62269935)	C	L1ME2	LINE/L1	(3)	6956	6240	2170825
396	27.0	2.1	0.0	chr2	179923586	179923718	(62269811)	C	L1ME2	LINE/L1	(2435)	4506	4368	2170825
2267	25.6	16.1	1.4	chr2	179923736	179925064	(62268465)	C	L1ME2	LINE/L1	(2660)	4281	2733	2170825
260	28.2	2.5	1.3	chr2	182465879	182465957	(59727572)	+	L2a	LINE/L2	3346	3425	(1)	2174002
15	0.0	0.0	0.0	chr2	182466041	182466057	(59727472)	+	(TG)n	Simple_repeat	1	17	(0)	2174003
1243	28.9	6.1	3.8	chr2	185038567	185039335	(57154194)	+	L1MCc	LINE/L1	866	1748	(5380)	2177267
2207	13.4	2.1	2.4	chr2	185039336	185039717	(57153812)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2177268
765	19.8	6.7	0.6	chr2	186627629	186627796	(55565733)	+	MER58A	DNA/hAT-Charlie	45	223	(1)	2179343
341	32.6	2.8	1.4	chr2	186627979	186628121	(55565408)	+	MIRb	SINE/MIR	3	147	(121)	2179344
265	34.0	3.6	1.9	chr2	187411431	187411538	(54781991)	+	MLT1M	LTR/ERVL-MaLR	169	278	(394)	2180368
544	33.7	9.4	5.7	chr2	190763207	190763472	(51430057)	C	Tigger15a	DNA/TcMar-Tigger	(156)	559	280	2184853
792	22.6	0.0	1.9	chr2	190763473	190763631	(51429898)	C	AluJo	SINE/Alu	(20)	292	137	2184854
544	33.7	9.4	5.7	chr2	190763632	190763895	(51429634)	C	Tigger15a	DNA/TcMar-Tigger	(436)	279	7	2184853
1053	26.9	6.7	5.9	chr2	191354948	191355389	(50838140)	+	MLT1H2	LTR/ERVL-MaLR	44	489	(0)	2185733
682	29.1	11.3	3.2	chr2	191355412	191355823	(50837706)	C	LTR79	LTR/ERVL	(37)	490	41	2185734
736	28.2	9.0	2.3	chr2	195837323	195837580	(46355949)	+	L1MEf	LINE/L1	2	278	(5922)	2191551
426	32.1	1.8	8.3	chr2	195837660	195837839	(46355690)	+	L1MEf	LINE/L1	191	358	(5842)	2191551
8023	24.0	7.9	2.1	chr2	195837834	195841210	(46352319)	+	L1MEf	LINE/L1	227	4933	(1213)	2191552
4692	24.5	5.4	2.2	chr2	196586302	196587818	(45605711)	C	Charlie25	DNA/hAT-Charlie	(812)	1712	145	2192627
352	28.7	11.3	6.3	chr2	196763023	196763197	(45430332)	+	MIRb	SINE/MIR	76	260	(8)	2192866
1990	14.6	3.9	0.3	chr2	196948369	196948669	(45244860)	C	AluJo	SINE/Alu	(0)	312	1	2193128
2710	22.4	9.0	2.3	chr2	196948670	196948744	(45244785)	+	L1ME3D	LINE/L1	6157	6234	(8)	2193121
1275	27.9	10.0	2.8	chr2	196948906	196949376	(45244153)	C	LTR16E1	LTR/ERVL	(29)	509	1	2193129
93	17.2	1.4	3.3	chr2	198453959	198454167	(43739362)	+	(TTTC)n	Simple_repeat	1	212	(0)	2195555
15	40.8	0.9	3.7	chr2	198454090	198454195	(43739334)	+	(CCTC)n	Simple_repeat	1	107	(0)	2195556
1959	11.9	3.2	2.5	chr2	198454196	198454472	(43739057)	C	AluSq4	SINE/Alu	(32)	279	1	2195557
5027	18.6	8.5	2.8	chr2	199283622	199284718	(42908811)	+	Charlie1a	DNA/hAT-Charlie	127	1279	(176)	2196634
1955	18.8	0.9	0.0	chr2	199284719	199285059	(42908470)	+	MER2	DNA/TcMar-Tigger	2	345	(0)	2196635
417	16.2	0.0	0.0	chr2	200363939	200364006	(41829523)	+	MER106B	DNA/hAT-Charlie	1	68	(991)	2198220
727	18.9	15.7	0.8	chr2	200364027	200364288	(41829241)	+	MLT1D	LTR/ERVL-MaLR	198	498	(7)	2198221
2395	8.2	0.0	0.0	chr2	200832208	200832500	(41361029)	+	AluSc	SINE/Alu	1	293	(16)	2198939
1542	24.4	17.5	1.9	chr2	200832501	200832734	(41360795)	+	LTR50	LTR/ERVL	440	684	(111)	2198938
955	30.9	8.0	0.8	chr2	200832806	200833197	(41360332)	+	ERVL-E-int	LTR/ERVL	4	426	(5241)	2198940
361	26.2	12.1	0.0	chr2	205344826	205344970	(36848559)	+	Tigger8	DNA/TcMar-Tigger	450	614	(53)	2206811
1492	22.2	7.9	5.4	chr2	205345051	205345557	(36847972)	C	MER39	LTR/ERV1	(0)	707	1	2206812
1019	27.5	12.2	3.4	chr2	206431520	206431709	(35761820)	C	LTR16A	LTR/ERVL	(0)	451	225	2208618
483	15.4	22.8	0.0	chr2	206431710	206431858	(35761671)	C	MER53	DNA/hAT	(0)	193	1	2208619
1019	27.5	12.2	3.4	chr2	206431859	206432077	(35761452)	C	LTR16A	LTR/ERVL	(227)	224	1	2208618
420	32.8	5.2	5.7	chr2	206596704	206596897	(35596632)	C	MIR3	SINE/MIR	(14)	194	2	2208841
1452	14.6	14.9	0.0	chr2	206596900	206597165	(35596364)	C	AluJr	SINE/Alu	(0)	312	1	2208842
189	27.8	2.0	4.9	chr2	207330625	207330726	(34862803)	C	MIR1_Amn	SINE/MIR	(0)	230	132	2209858
309	33.6	4.5	3.2	chr2	207331260	207331413	(34862116)	+	MIR3	SINE/MIR	42	197	(11)	2209859
2161	13.3	1.3	0.0	chr2	210634949	210635242	(31558287)	C	AluSx3	SINE/Alu	(13)	298	1	2214587
850	21.6	2.4	2.9	chr2	210635426	210635635	(31557894)	+	MER3	DNA/hAT-Charlie	1	209	(0)	2214588
2006	22.0	10.9	1.2	chr2	215684194	215684772	(26508757)	C	LTR48B	LTR/ERV1	(2)	642	1	2221477
2024	13.8	1.6	0.7	chr2	216051004	216051308	(26142221)	+	AluSx3	SINE/Alu	1	308	(3)	2222079
239	34.6	5.5	0.0	chr2	216986419	216986574	(25206955)	+	L1ME3B	LINE/L1	5930	6094	(148)	2223749
570	15.7	0.0	0.0	chr2	216986698	216986780	(25206749)	+	AluJr	SINE/Alu	36	118	(194)	2223750
15	4.7	0.0	0.0	chr2	217483528	217483549	(24709980)	+	(AATA)n	Simple_repeat	1	22	(0)	2224468
522	24.2	2.4	0.0	chr2	217796125	217796248	(24397281)	+	MER5B	DNA/hAT-Charlie	2	128	(50)	2224971
547	29.9	1.3	0.0	chr2	217796612	217796765	(24396764)	C	MER5A1	DNA/hAT-Charlie	(8)	158	3	2224972
2353	11.1	0.0	0.9	chr2	217796776	217797090	(24396439)	+	AluSx	SINE/Alu	1	312	(0)	2224973
575	18.9	9.1	1.6	chr2	217833912	217834094	(24359435)	+	MER33	DNA/hAT-Charlie	127	324	(0)	2225027
14	7.2	0.0	8.6	chr2	218406515	218406549	(23786980)	+	(GCCCC)n	Simple_repeat	1	35	(0)	2226047
30	3.4	0.0	0.0	chr2	218454614	218454643	(23738886)	+	(GT)n	Simple_repeat	1	30	(0)	2226156
13	3.7	10.7	0.0	chr2	218859568	218859595	(23333934)	+	(GAGGC)n	Simple_repeat	1	31	(0)	2226935
1379	12.3	6.8	22.1	chr2	220782571	220782937	(21410592)	+	MER54B	LTR/ERVL	42	342	(451)	2230052
1375	14.3	9.3	0.0	chr2	220782946	220783190	(21410339)	+	MER54B	LTR/ERVL	524	793	(0)	2230052
791	31.3	3.9	3.0	chr2	220783276	220783608	(21409921)	C	MER102b	DNA/hAT-Charlie	(5)	336	1	2230055
295	30.2	5.5	3.3	chr2	220783630	220783733	(21409796)	+	L2a	LINE/L2	3269	3426	(0)	2230056
537	21.0	12.8	1.4	chr2	221219850	221219994	(20973535)	+	MER5A1	DNA/hAT-Charlie	1	164	(2)	2230730
2090	13.7	1.0	0.0	chr2	221220056	221220355	(20973174)	C	AluJb	SINE/Alu	(8)	304	2	2230731
508	26.7	3.5	5.2	chr2	221411518	221411691	(20781838)	C	MER63A	DNA/hAT-Blackjack	(39)	171	1	2231036
586	29.0	18.9	2.2	chr2	222864071	222864662	(19328867)	C	L2	LINE/L2	(799)	2620	1907	2233367
310	32.1	7.7	1.8	chr2	222864688	222864858	(19328671)	C	L2	LINE/L2	(1634)	1785	1604	2233367
2677	11.0	2.1	0.3	chr2	224367503	224367876	(17825653)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2235798
372	32.2	4.2	3.3	chr2	224368040	224368251	(17825278)	+	MLT1K	LTR/ERVL-MaLR	130	343	(252)	2235799
22024	12.7	1.8	2.8	chr2	226586068	226592647	(15600882)	C	L1PA11	LINE/L1	(4)	8165	9	2239145
339	16.1	6.1	0.0	chr2	226966618	226966679	(15226850)	+	MER3	DNA/hAT-Charlie	144	209	(0)	2239706
259	19.6	7.3	0.0	chr2	226966641	226966691	(15226838)	C	MER3	DNA/hAT-Charlie	(119)	90	36	2239707
240	23.3	0.0	0.0	chr2	226966701	226966743	(15226786)	+	MER5A	DNA/hAT-Charlie	40	82	(107)	2239708
540	20.5	0.0	5.1	chr2	226966747	226966863	(15226666)	C	AluJr	SINE/Alu	(93)	219	109	2239709
511	23.8	0.0	0.0	chr2	226966899	226966999	(15226530)	+	MER5A	DNA/hAT-Charlie	89	189	(0)	2239710
662	19.7	3.2	0.0	chr2	226967000	226967117	(15226412)	C	MER5A	DNA/hAT-Charlie	(63)	126	5	2239711
556	27.3	3.6	1.2	chr2	226967117	226967279	(15226250)	C	Helitron3Na_Mam	RC/Helitron	(286)	200	34	2239703
1343	2.5	0.0	2.4	chr2	226967387	226967550	(15225979)	C	L1PA4	LINE/L1	(3)	6152	5993	2239712
314	29.4	1.9	4.7	chr2	230059611	230059717	(12133812)	C	MIRb	SINE/MIR	(141)	127	24	2244660
437	15.1	1.9	10.9	chr2	230731448	230731514	(11462015)	+	L1MB8	LINE/L1	6063	6127	(51)	2245611
1665	16.9	3.5	0.4	chr2	230731515	230731793	(11461736)	C	AluJr4	SINE/Alu	(23)	289	2	2245612
437	15.1	1.9	10.9	chr2	230731794	230731844	(11461685)	+	L1MB8	LINE/L1	6128	6170	(8)	2245611
2321	10.7	0.3	0.0	chr2	231852676	231852974	(10340555)	+	AluSx	SINE/Alu	1	300	(12)	2247757
23	10.0	0.0	0.0	chr2	231853119	231853151	(10340378)	+	(GT)n	Simple_repeat	1	33	(0)	2247758
16	13.1	0.0	0.0	chr2	231853176	231853200	(10340329)	+	(GT)n	Simple_repeat	1	25	(0)	2247758
2193	11.7	0.3	1.9	chr2	233243928	233244244	(8949285)	+	AluSz	SINE/Alu	1	312	(0)	2250187
22	34.3	1.2	0.0	chr2	233244245	233244329	(8949200)	+	GA-rich	Low_complexity	1	86	(0)	2250188
1813	16.8	1.3	2.5	chr2	234203645	234203959	(7989570)	+	AluJb	SINE/Alu	1	311	(1)	2251563
690	26.1	13.3	3.8	chr2	234203970	234204335	(7989194)	C	L1ME3A	LINE/L1	(0)	6173	5768	2251564
876	25.0	1.4	0.9	chr2	235937681	235937898	(6255631)	+	MER20	DNA/hAT-Charlie	1	219	(0)	2254289
245	26.0	4.9	1.3	chr2	236245303	236245380	(5948149)	C	MIRb	SINE/MIR	(93)	175	95	2254728
577	17.4	2.5	6.4	chr2	237678859	237679036	(4514493)	C	MIR	SINE/MIR	(14)	254	77	2256712
45548	8.4	1.0	0.8	chr2	238205829	238211673	(3981856)	C	HERVFH19-int	LTR/ERV1	(179)	7540	1676	2257497
341	22.4	14.4	2.7	chr2	238899238	238899347	(3294182)	C	L2a	LINE/L2	(2)	3424	3300	2258359
441	32.7	4.6	3.7	chr2	238899353	238899568	(3293961)	C	MIR	SINE/MIR	(19)	243	26	2258360
209	32.3	10.6	0.0	chr2	240461026	240461118	(1732411)	C	AmnSINE2	SINE/tRNA-Deu	(251)	107	4	2260062
2129	11.5	0.3	0.7	chr2	241305128	241305422	(888107)	C	AluSx	SINE/Alu	(18)	294	1	2260950
501	21.4	6.4	0.0	chr2	241305504	241305620	(887909)	C	MER20	DNA/hAT-Charlie	(0)	219	95	2260951
2600	5.9	0.0	0.3	chr2	241305753	241306059	(887470)	C	AluY	SINE/Alu	(5)	306	1	2260952
352	34.1	10.8	1.6	chr2	241366747	241366931	(826598)	C	MIR3	SINE/MIR	(2)	206	3	2261041
912	7.5	0.0	0.0	chr20	402402	402508	(64041659)	+	AluSq2	SINE/Alu	207	313	(0)	2262864
1651	13.6	4.1	2.3	chr20	402515	402779	(64041388)	C	AluJr	SINE/Alu	(31)	281	12	2262865
428	27.3	2.5	6.1	chr20	402800	402963	(64041204)	+	MER5A1	DNA/hAT-Charlie	9	166	(0)	2262866
4895	12.5	1.8	9.3	chr20	1419438	1420906	(63023261)	C	L1PA16	LINE/L1	(1)	6165	4809	2264971
9659	10.8	0.7	2.2	chr20	2569915	2571618	(61872549)	+	L1P4	LINE/L1	3922	5593	(573)	2267195
531	18.9	0.0	19.2	chr20	2571619	2571718	(61872449)	C	MLT1E3	LTR/ERVL-MaLR	(434)	193	110	2267194
865	14.7	0.8	0.0	chr20	2571719	2571847	(61872320)	+	FLAM_C	SINE/Alu	1	130	(13)	2267196
531	18.9	0.0	19.2	chr20	2571848	2571923	(61872244)	C	MLT1E3	LTR/ERVL-MaLR	(518)	109	51	2267194
387	29.3	0.0	1.7	chr20	2571972	2572089	(61872078)	C	L2a	LINE/L2	(30)	3396	3281	2267197
2017	13.2	6.2	2.0	chr20	4154367	4154662	(60289505)	C	AluSx1	SINE/Alu	(3)	309	1	2270259
761	17.9	1.8	10.5	chr20	4154663	4154736	(60289431)	C	MER5A1	DNA/hAT-Charlie	(96)	70	1	2270258
14	10.3	0.0	8.1	chr20	4154845	4154881	(60289286)	+	G-rich	Low_complexity	1	37	(0)	2270260
1956	22.9	3.5	2.0	chr20	5056788	5057192	(59386975)	+	LTR16A1	LTR/ERVL	45	456	(0)	2271899
389	17.9	0.0	0.0	chr20	5057193	5057259	(59386908)	C	AluJo	SINE/Alu	(13)	299	233	2271903
402	32.8	1.1	9.7	chr20	5057260	5057339	(59386828)	+	L3b	LINE/CR1	3186	3263	(836)	2271904
1589	18.4	3.0	1.0	chr20	8181693	8181985	(56262182)	+	AluJr4	SINE/Alu	1	299	(13)	2276863
1088	27.9	0.4	3.1	chr20	8182239	8182526	(56261641)	+	MLT1H	LTR/ERVL-MaLR	39	318	(231)	2276864
1522	27.1	5.5	5.0	chr20	8857371	8858158	(55586009)	C	L1ME3F	LINE/L1	(383)	5860	5068	2277938
12	9.2	0.0	4.0	chr20	10696426	10696450	(53747717)	+	(TTTC)n	Simple_repeat	1	25	(0)	2280898
862	24.7	21.2	2.5	chr20	10696675	10697306	(53746861)	+	LTR50	LTR/ERVL	3	766	(29)	2280899
1133	22.8	5.8	2.2	chr20	16249487	16249969	(48194198)	+	MER34	LTR/ERV1	11	644	(63)	2289097
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
40	30.7	2.7	2.1	chr20	30815139	30815324	(33628843)	+	GA-rich	Low_complexity	1	191	(0)	2305476
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
866	22.8	16.0	2.8	chr20	32304404	32304728	(32139439)	+	L1ME4b	LINE/L1	342	717	(175)	2308163
34	0.0	0.0	0.0	chr20	32304796	32304824	(32139343)	+	(AG)n	Simple_repeat	1	29	(0)	2308164
2191	7.6	0.3	9.2	chr20	32778057	32778384	(31665783)	+	AluSc	SINE/Alu	1	299	(10)	2309273
1257	16.6	10.5	0.5	chr20	32778716	32778938	(31665229)	+	AluJr	SINE/Alu	38	285	(27)	2309274
1119	26.9	10.9	2.3	chr20	34523276	34523863	(29920304)	+	L2a	LINE/L2	2762	3422	(4)	2313259
292	31.3	7.7	5.2	chr20	34523876	34524104	(29920063)	C	L3	LINE/CR1	(771)	3328	3094	2313257
457	25.1	5.7	2.1	chr20	34524275	34524461	(29919706)	C	L1ME4c	LINE/L1	(184)	646	453	2313260
216	29.5	11.0	0.0	chr20	34524510	34524614	(29919553)	+	L2b	LINE/L2	3252	3369	(6)	2313261
12945	7.5	1.3	1.4	chr20	35162099	35165045	(29279122)	+	L1PA7	LINE/L1	832	6467	(2)	2314670
1816	16.3	0.3	5.5	chr20	36963389	36963713	(27480454)	+	AluSz6	SINE/Alu	1	308	(4)	2318901
1801	18.2	0.0	2.2	chr20	37103814	37104132	(27340035)	+	AluJb	SINE/Alu	1	312	(0)	2319229
740	26.6	8.9	5.4	chr20	37104133	37104161	(27340006)	C	L1ME4a	LINE/L1	(289)	5835	5810	2319228
2116	13.6	0.0	6.5	chr20	37104162	37104389	(27339778)	C	Tigger4b	DNA/TcMar-Tigger	(0)	361	136	2319230
1739	19.1	0.0	3.0	chr20	38785312	38785615	(25658552)	C	AluJo	SINE/Alu	(17)	295	1	2322864
27	0.0	3.5	0.0	chr20	38785624	38785652	(25658515)	+	(TTGT)n	Simple_repeat	1	30	(0)	2322865
1923	11.8	2.5	3.8	chr20	38785653	38785940	(25658227)	C	AluSx	SINE/Alu	(28)	284	1	2322866
372	29.2	3.6	0.0	chr20	41615098	41615203	(22828964)	+	MIRb	SINE/MIR	21	130	(138)	2327796
241	24.5	19.0	2.0	chr20	43674131	43674230	(20769937)	+	L4_A_Mam	LINE/RTE-X	4682	4802	(188)	2331711
2105	9.8	4.0	2.0	chr20	43674235	43674391	(20769776)	C	AluSq2	SINE/Alu	(11)	302	137	2331712
2262	8.0	0.7	2.6	chr20	43674392	43674693	(20769474)	C	AluSx3	SINE/Alu	(15)	296	1	2331713
2166	11.5	0.3	1.3	chr20	44636801	44637104	(19807063)	C	AluSx	SINE/Alu	(11)	301	1	2333955
519	28.1	7.3	0.6	chr20	44637190	44637354	(19806813)	+	MIR	SINE/MIR	12	188	(74)	2333956
2122	10.9	2.9	0.7	chr20	46156312	46156614	(18287553)	C	AluSg	SINE/Alu	(0)	310	1	2337055
662	22.9	2.6	5.7	chr20	46156626	46156701	(18287466)	+	MIRb	SINE/MIR	73	155	(113)	2337056
2018	11.2	0.3	1.8	chr20	46156702	46156987	(18287180)	+	AluSx3	SINE/Alu	1	282	(29)	2337057
26	0.0	3.5	0.0	chr20	46156988	46157016	(18287151)	+	(AAAAT)n	Simple_repeat	1	30	(0)	2337058
662	22.1	2.8	6.4	chr20	46157017	46157134	(18287033)	+	MIRb	SINE/MIR	156	267	(1)	2337056
1070	28.9	10.8	1.6	chr20	48070267	48070719	(16373448)	+	MLT1J	LTR/ERVL-MaLR	1	500	(12)	2341395
1003	23.9	6.5	0.4	chr20	48070915	48071158	(16373009)	+	MER34	LTR/ERV1	20	279	(263)	2341396
821	18.8	1.1	4.7	chr20	49489375	49489564	(14954603)	+	MER20	DNA/hAT-Charlie	37	219	(0)	2344555
1235	30.1	10.3	1.3	chr20	49489610	49490296	(14953871)	C	L2a	LINE/L2	(3)	3423	2657	2344556
640	23.7	12.0	4.5	chr20	53923403	53923755	(10520412)	+	L1ME4a	LINE/L1	5730	6112	(12)	2354677
480	31.8	0.6	0.1	chr20	53924209	53924393	(10519774)	+	MIRb	SINE/MIR	8	200	(68)	2354678
311	24.4	4.7	5.2	chr20	56827910	56828049	(7616118)	C	MER20	DNA/hAT-Charlie	(604)	179	30	2359962
760	21.3	2.6	0.5	chr20	56828050	56828238	(7615929)	C	MER53	DNA/hAT	(0)	193	1	2359963
817	19.9	4.1	3.6	chr20	57052161	57052353	(7391814)	C	MER3	DNA/hAT-Charlie	(5)	204	11	2360451
364	26.0	7.3	1.6	chr20	57587298	57587426	(6856741)	C	L2a	LINE/L2	(0)	3426	3290	2361437
270	21.3	2.6	2.6	chr20	58688728	58688804	(5755363)	+	L1MC4	LINE/L1	7960	8036	(6)	2363333
2227	11.8	1.3	0.0	chr20	58689255	58689558	(5754609)	C	AluSz6	SINE/Alu	(2)	310	3	2363340
993	24.2	14.0	5.1	chr20	60298167	60298614	(4145553)	C	MLT1D	LTR/ERVL-MaLR	(7)	498	5	2365774
207	27.4	7.5	0.0	chr20	60298618	60298679	(4145488)	+	MIR	SINE/MIR	189	255	(7)	2365775
194	24.2	8.3	1.5	chr20	62925210	62925276	(1518891)	+	L2b	LINE/L2	3246	3317	(58)	2369099
17	0.0	0.0	0.0	chr20	62948804	62948822	(1495345)	+	(T)n	Simple_repeat	1	19	(0)	2369127
637	33.1	8.5	2.0	chr20	63844986	63845478	(598689)	+	L1ME3A	LINE/L1	5626	6153	(20)	2370120
1074	28.0	16.1	5.3	chr20	64008185	64008949	(435218)	C	L1MC5a	LINE/L1	(361)	2416	1566	2370394
419	26.3	14.2	0.0	chr20	64039755	64039887	(404280)	C	MIR	SINE/MIR	(62)	200	46	2370445
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
21	16.7	0.0	2.4	chr21	9819273	9819314	(36890669)	+	(AC)n	Simple_repeat	1	42	(0)	2374898
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
507	33.3	6.8	9.6	chr21	15663497	15664121	(31045862)	C	LTR67B	LTR/ERVL	(8)	612	7	2379427
261	32.5	8.6	8.5	chr21	15664123	15664262	(31045721)	C	MIRb	SINE/MIR	(33)	235	88	2379428
1600	16.6	0.0	10.4	chr21	15664263	15664600	(31045383)	+	AluJr4	SINE/Alu	1	303	(9)	2379429
261	32.2	7.5	8.8	chr21	15664601	15664682	(31045301)	C	MIRb	SINE/MIR	(178)	90	2	2379428
2516	7.6	0.0	0.3	chr21	15962850	15963152	(30746831)	+	AluSq2	SINE/Alu	1	302	(11)	2379832
6334	18.4	5.6	4.6	chr21	16528499	16529442	(30180541)	C	L1MD1	LINE/L1	(2665)	3872	2920	2380540
1111	15.4	2.1	0.0	chr21	26729713	26729900	(19980083)	C	L1PA15	LINE/L1	(5)	6160	5969	2394405
5019	20.6	7.8	1.4	chr21	26729901	26731523	(19978460)	C	L1PB3	LINE/L1	(4316)	2600	870	2394402
1912	13.3	14.2	0.0	chr21	28934324	28934621	(17775362)	+	MSTA	LTR/ERVL-MaLR	1	355	(73)	2397470
1061	8.9	0.0	1.5	chr21	28934622	28934756	(17775227)	C	AluSz	SINE/Alu	(179)	133	1	2397471
2293	21.3	7.5	3.0	chr21	32593000	32593575	(14116408)	+	MER77	LTR/ERVL	1	604	(0)	2403480
228	27.4	7.3	6.4	chr21	32593576	32593631	(14116352)	+	MIRc	SINE/MIR	147	204	(64)	2403479
408	23.1	8.7	12.9	chr21	32781554	32781747	(13928236)	C	L2b	LINE/L2	(3)	3384	3200	2403749
1547	18.6	10.3	1.6	chr21	32781809	32782385	(13927598)	C	LTR48	LTR/ERV1	(0)	787	1	2403750
1622	23.4	2.6	5.3	chr21	36020563	36021036	(10688947)	+	MLT1C	LTR/ERVL-MaLR	6	466	(1)	2409001
239	27.0	6.0	4.9	chr21	36561708	36561853	(10148130)	C	LTR81	LTR/Gypsy	(847)	306	160	2410106
830	20.6	2.5	3.5	chr21	36561859	36562059	(10147924)	C	LTR81B	LTR/Gypsy	(1088)	305	107	2410104
36	2.9	0.0	0.0	chr21	37731101	37731135	(8978848)	+	(GT)n	Simple_repeat	1	35	(0)	2412044
421	27.1	13.5	2.2	chr21	37731443	37731665	(8978318)	C	MIRb	SINE/MIR	(3)	265	5	2412045
344	33.6	2.3	1.5	chr21	38810159	38810288	(7899695)	+	MIR3	SINE/MIR	15	145	(63)	2413550
1946	19.3	6.0	2.5	chr21	42117094	42117387	(4592596)	C	L1MB7	LINE/L1	(180)	6004	5700	2418458
34842	11.6	3.3	2.9	chr21	42922766	42924948	(3785035)	C	HERVH48-int	LTR/ERV1	(4147)	2507	256	2419570
1601	19.0	0.0	3.5	chr21	43608688	43608998	(3100985)	+	AluJo	SINE/Alu	9	308	(4)	2420494
5739	12.8	0.4	2.9	chr21	43608999	43609444	(3100539)	+	L1PA17	LINE/L1	5729	6157	(9)	2420492
930	24.9	5.0	14.9	chr21	44650236	44650706	(2059277)	+	MLT1C	LTR/ERVL-MaLR	33	452	(15)	2421989
15	16.9	0.0	0.0	chr21	46300881	46300913	(409070)	+	A-rich	Low_complexity	1	33	(0)	2423755
1914	15.9	0.0	1.7	chr21	46301134	46301434	(408549)	C	AluJo	SINE/Alu	(4)	308	13	2423756
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
3058	20.8	2.7	1.3	chr22	11900876	11902001	(38916467)	C	L1MA5	LINE/L1	(354)	5946	4805	2425510
290	22.2	1.5	0.5	chr22	11932477	11932565	(38885903)	C	L1P4	LINE/L1	(1123)	5023	4933	2425553
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
2667	3.8	0.0	1.6	chr22	17504425	17504740	(33313728)	C	AluYm1	SINE/Alu	(0)	311	1	2429140
4341	4.4	0.2	0.0	chr22	18890645	18891207	(31927261)	C	HSATI	Satellite	(10)	567	4	2431162
36	2.7	13.3	0.0	chr22	18891210	18891284	(31927184)	+	(AT)n	Simple_repeat	1	85	(0)	2431163
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
21899	6.9	0.8	1.5	chr22	19935776	19938863	(30879605)	+	HERVK11-int	LTR/ERVK	1	3067	(4886)	2432709
240	34.1	6.4	6.4	chr22	23303150	23303379	(27515089)	C	L2b	LINE/L2	(4)	3371	3174	2438069
1656	25.5	8.1	1.6	chr22	23303794	23303931	(27514537)	C	L1MB7	LINE/L1	(15)	6169	6008	2438070
524	29.8	7.9	6.7	chr22	23362242	23362540	(27455928)	C	MER46C	DNA/TcMar-Tigger	(34)	304	2	2438175
3004	9.8	2.3	0.5	chr22	23362543	23362962	(27455506)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2438176
268	27.1	13.0	0.9	chr22	23375493	23375600	(27442868)	C	Charlie15a	DNA/hAT-Charlie	(43)	181	59	2438209
280	31.5	8.9	6.0	chr22	23375667	23375983	(27442485)	+	L2c	LINE/L2	3021	3347	(40)	2438210
1466	21.3	6.4	1.1	chr22	24706354	24706709	(26111759)	C	L1MA9	LINE/L1	(0)	6312	5937	2440506
4646	15.8	10.5	2.5	chr22	27935793	27936648	(22881820)	+	Tigger2b_Pri	DNA/TcMar-Tigger	113	1067	(1)	2447757
451	22.0	5.0	3.6	chr22	27936757	27936893	(22881575)	C	HAL1M8	LINE/L1	(849)	2142	2004	2447759
1579	15.5	7.3	5.4	chr22	28162668	28162964	(22655504)	+	AluJr	SINE/Alu	1	303	(9)	2448079
1151	18.2	19.2	0.0	chr22	30518543	30518778	(20299690)	C	AluSz	SINE/Alu	(20)	292	1	2452803
444	24.4	2.5	0.8	chr22	30518779	30518903	(20299565)	C	MER67D	LTR/ERV1	(323)	191	68	2452802
263	17.4	17.3	4.3	chr22	30518908	30518991	(20299477)	C	L1M3	LINE/L1	(522)	5656	5563	2452804
2476	10.6	0.0	0.0	chr22	30518998	30519309	(20299159)	+	AluSz	SINE/Alu	1	312	(0)	2452805
2140	12.3	1.9	0.0	chr22	31736757	31737057	(19081411)	+	AluSx3	SINE/Alu	1	307	(4)	2455503
1022	18.7	6.7	6.3	chr22	31737058	31737130	(19081338)	+	MER58A	DNA/hAT-Charlie	165	224	(0)	2455502
2267	12.0	0.0	0.0	chr22	31737200	31737498	(19080970)	+	AluSx1	SINE/Alu	2	300	(12)	2455504
251	23.7	7.6	2.0	chr22	35083670	35083768	(15734700)	C	Tigger12	DNA/TcMar-Tigger	(2065)	410	306	2462216
674	28.1	11.2	0.0	chr22	35083919	35084210	(15734258)	+	MER102c	DNA/hAT-Charlie	1	329	(2)	2462217
907	20.3	5.3	2.4	chr22	35955193	35955485	(14862983)	C	Charlie1	DNA/hAT-Charlie	(2)	2779	2478	2464049
1822	14.9	5.1	0.9	chr22	35955486	35955804	(14862664)	C	MER1B	DNA/hAT-Charlie	(0)	339	7	2464050
3627	17.4	9.1	2.5	chr22	35955808	35956362	(14862106)	C	Charlie1	DNA/hAT-Charlie	(297)	2484	1896	2464049
254	31.8	9.3	0.0	chr22	36586149	36586255	(14232213)	+	L2b	LINE/L2	3243	3360	(15)	2465409
19	15.0	3.5	5.1	chr22	36701506	36701562	(14116906)	+	(CCCT)n	Simple_repeat	1	59	(0)	2465659
1682	27.3	7.9	5.0	chr22	36731500	36732522	(14085946)	+	L2a	LINE/L2	2335	3400	(26)	2465730
392	33.0	12.4	6.8	chr22	36732666	36733065	(14085403)	+	L2c	LINE/L2	2951	3376	(11)	2465731
214	22.0	21.0	4.4	chr22	38780474	38780587	(12037881)	+	L2a	LINE/L2	3289	3426	(0)	2470255
1404	31.4	13.6	1.8	chr22	38781372	38782496	(12035972)	+	L2a	LINE/L2	2141	3426	(0)	2470256
2014	10.5	0.4	1.4	chr22	41305361	41305522	(9512946)	+	AluSx1	SINE/Alu	136	295	(17)	2475602
235	22.7	10.2	5.4	chr22	41305809	41305922	(9512546)	+	L2b	LINE/L2	3261	3371	(4)	2475604
2340	9.8	0.0	2.2	chr22	42064359	42064675	(8753793)	+	AluSx3	SINE/Alu	1	310	(1)	2477359
340	18.0	7.4	2.0	chr22	42064689	42064790	(8753678)	+	MIRc	SINE/MIR	144	251	(17)	2477354
321	16.4	2.5	3.7	chr22	42064839	42064920	(8753548)	+	MLT1M	LTR/ERVL-MaLR	111	191	(481)	2477360
597	20.7	18.3	5.4	chr22	42064947	42065158	(8753310)	C	MIR	SINE/MIR	(9)	253	18	2477361
1460	11.4	0.0	0.5	chr22	42568923	42569123	(8249345)	C	AluSx1	SINE/Alu	(53)	259	60	2478401
537	15.3	1.0	3.0	chr22	42569150	42569250	(8249218)	C	U6	snRNA	(8)	99	1	2478402
2001	15.8	0.0	0.3	chr22	42569256	42569559	(8248909)	C	AluSx1	SINE/Alu	(9)	303	1	2478403
1732	18.3	0.7	2.7	chr22	42824370	42824664	(7993804)	C	AluJr	SINE/Alu	(23)	289	1	2479008
2298	12.7	2.8	0.0	chr22	42824689	42825034	(7993434)	C	L1PA17	LINE/L1	(8)	6158	5803	2479009
1207	15.7	5.9	3.1	chr22	42825055	42825283	(7993185)	+	AluJo	SINE/Alu	76	311	(1)	2479010
1902	18.3	11.1	1.4	chr22	43317732	43318152	(7500316)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	2479989
1603	19.0	3.8	0.4	chr22	43318245	43318523	(7499945)	+	AluJo	SINE/Alu	9	297	(15)	2479990
2221	12.3	0.0	0.7	chr22	44072435	44072742	(6745726)	C	AluSz	SINE/Alu	(6)	306	1	2481316
937	22.9	4.2	2.0	chr22	45624228	45624530	(5193938)	C	L1ME3	LINE/L1	(4471)	1944	1635	2484257
492	21.8	4.7	0.0	chr22	45624531	45624631	(5193837)	C	U6	snRNA	(0)	107	2	2484271
227	19.7	0.0	10.3	chr22	45624632	45624648	(5193820)	C	L1ME3	LINE/L1	(4850)	1550	1538	2484257
276	36.2	8.4	4.4	chr22	45624927	45625131	(5193337)	C	MIRb	SINE/MIR	(8)	260	47	2484272
2280	12.9	0.0	0.3	chr22	45625145	45625455	(5193013)	C	AluSg	SINE/Alu	(0)	310	1	2484273
1838	13.5	0.0	3.9	chr22	46237316	46237626	(4580842)	+	AluJr	SINE/Alu	1	299	(13)	2485246
1353	7.4	0.0	0.0	chr22	46779396	46779558	(4038910)	C	AluSx1	SINE/Alu	(149)	163	1	2486054
13	25.7	3.5	1.7	chr22	49704793	49704849	(1113619)	+	(CCCAG)n	Simple_repeat	1	59	(0)	2489652
2006	22.2	11.8	10.9	chr22	50212003	50213065	(605403)	C	L1MB3	LINE/L1	(2354)	4028	3083	2490334
2734	19.2	1.7	2.4	chr3	4601101	4601237	(193694322)	+	L1MB7	LINE/L1	4825	4956	(1190)	2499293
1931	12.6	6.4	0.0	chr3	4601238	4601515	(193694044)	+	AluJb	SINE/Alu	2	298	(14)	2499294
4302	18.3	3.7	3.2	chr3	4601516	4602253	(193693306)	+	L1MB7	LINE/L1	4957	5692	(492)	2499293
1451	11.9	3.8	2.7	chr3	4836186	4836443	(193459116)	+	L1MB3	LINE/L1	5923	6183	(0)	2499657
22	0.0	0.0	0.0	chr3	4836736	4836759	(193458800)	+	(T)n	Simple_repeat	1	24	(0)	2499658
43066	7.2	1.2	0.4	chr3	5143512	5147022	(193148537)	C	HERVP71A-int	LTR/ERV1	(2070)	5520	1981	2500310
3215	5.5	4.1	0.5	chr3	5147023	5147443	(193148116)	C	L1PA5	LINE/L1	(1)	6153	5717	2500311
1628	20.6	0.0	0.0	chr3	8411222	8411503	(189884056)	+	AluJo	SINE/Alu	6	287	(25)	2505301
428	28.5	9.8	10.2	chr3	8411504	8411740	(189883819)	+	L2a	LINE/L2	2634	2881	(538)	2505300
1047	8.5	3.4	0.0	chr3	9897306	9897446	(188398113)	C	AluSx	SINE/Alu	(166)	146	1	2508203
392	26.5	15.4	0.0	chr3	9897461	9897641	(188397918)	+	MIRb	SINE/MIR	45	258	(10)	2508204
4601	15.4	3.8	1.0	chr3	13754517	13755418	(184540141)	C	L1MB7	LINE/L1	(62)	6122	5192	2515837
602	31.8	13.3	4.8	chr3	14197503	14197859	(184097700)	C	MLT1J2	LTR/ERVL-MaLR	(52)	392	1	2516443
233	23.3	12.2	0.0	chr3	16898820	16898905	(181396654)	C	Charlie17a	DNA/hAT-Charlie	(11)	206	109	2521171
13	15.4	2.5	4.9	chr3	16898912	16898951	(181396608)	+	G-rich	Low_complexity	1	41	(0)	2521172
2213	28.1	7.3	5.3	chr3	19684209	19685304	(178610255)	+	L1MB1	LINE/L1	676	1795	(4770)	2524962
20	0.0	0.0	0.0	chr3	23647219	23647240	(174648319)	+	(A)n	Simple_repeat	1	22	(0)	2530459
1782	25.6	3.7	1.1	chr3	23647252	23647702	(174647857)	C	LTR16B	LTR/ERVL	(0)	463	1	2530460
306	24.6	1.0	2.0	chr3	23781788	23781933	(174513626)	+	L1ME3G	LINE/L1	5189	5331	(911)	2530762
1243	18.6	0.5	1.8	chr3	23781964	23782184	(174513375)	+	AluJo	SINE/Alu	89	306	(6)	2530763
1171	29.4	5.6	3.4	chr3	23782186	23782771	(174512788)	+	L1ME3G	LINE/L1	101	605	(319)	2530762
13523	13.7	4.7	0.9	chr3	25138789	25141111	(173154448)	+	Tigger1	DNA/TcMar-Tigger	1	2416	(2)	2532922
45	32.0	2.2	1.1	chr3	25420690	25420868	(172874691)	+	(ATGG)n	Simple_repeat	1	183	(0)	2533293
16	0.0	0.0	0.0	chr3	25420992	25421009	(172874550)	+	(A)n	Simple_repeat	1	18	(0)	2533294
760	30.9	14.2	5.8	chr3	28988742	28989476	(169306083)	C	L1MEg	LINE/L1	(5168)	2165	1359	2538578
468	25.0	1.7	0.0	chr3	29424249	29424364	(168871195)	+	MER94	DNA/hAT-Blackjack	2	119	(15)	2539146
3746	14.0	5.9	6.9	chr3	33677818	33678697	(164616862)	+	L1MC1	LINE/L1	909	1778	(4730)	2546246
1093	19.4	3.7	0.9	chr3	37708519	37708731	(160586828)	+	MER20	DNA/hAT-Charlie	1	219	(0)	2551959
188	17.2	5.9	15.8	chr3	37708732	37708781	(160586778)	C	MIRb	SINE/MIR	(117)	151	108	2551958
15848	16.6	1.6	2.7	chr3	38071345	38076287	(160219272)	C	HERVH-int	LTR/ERV1	(1959)	4695	83	2552497
697	33.5	4.0	8.1	chr3	38353059	38353299	(159942260)	C	L1ME1	LINE/L1	(990)	5156	4908	2552910
1855	14.8	1.0	2.2	chr3	38353300	38353610	(159941949)	C	AluJb	SINE/Alu	(5)	307	1	2552915
29821	7.8	1.1	1.4	chr3	38440180	38445931	(159849628)	C	HERV9NC-int	LTR/ERV1	(945)	5173	1	2553051
4811	22.7	8.7	3.3	chr3	40507390	40507799	(157787760)	C	L1ME1	LINE/L1	(2262)	4057	3613	2556129
675	20.3	3.0	0.0	chr3	40507800	40507927	(157787632)	C	FLAM_A	SINE/Alu	(10)	132	1	2556133
4811	22.7	8.7	3.3	chr3	40507928	40508590	(157786969)	C	L1ME1	LINE/L1	(2707)	3612	2891	2556129
1790	27.2	11.2	2.2	chr3	41381378	41382326	(156913233)	+	L2a	LINE/L2	2373	3423	(3)	2557398
287	16.0	0.0	4.0	chr3	41385494	41385543	(156910016)	+	AluYg6	SINE/Alu	250	297	(14)	2557405
354	25.3	11.5	3.4	chr3	41385570	41385745	(156909814)	C	MER112	DNA/hAT-Charlie	(67)	194	3	2557406
2304	9.6	0.0	0.3	chr3	42027858	42028150	(156267409)	C	AluSq	SINE/Alu	(21)	292	1	2558412
523	26.4	15.8	4.4	chr3	42028378	42028862	(156266697)	C	L2a	LINE/L2	(21)	3354	2804	2558413
706	28.7	12.5	2.6	chr3	43082160	43082792	(155212767)	+	LTR84b	LTR/ERVL	14	732	(29)	2560108
539	25.3	3.1	3.1	chr3	43082793	43082951	(155212608)	C	LTR16C	LTR/ERVL	(0)	489	331	2560109
17	20.2	0.0	0.0	chr3	45347478	45347511	(152948048)	+	(CA)n	Simple_repeat	1	34	(0)	2563682
2309	9.9	1.3	0.0	chr3	45347968	45348261	(152947298)	C	AluSq2	SINE/Alu	(14)	299	2	2563683
1970	15.6	0.3	1.9	chr3	45614441	45614754	(152680805)	+	AluJb	SINE/Alu	3	311	(1)	2564152
253	20.6	14.4	7.8	chr3	45614773	45614888	(152680671)	C	L1ME4a	LINE/L1	(0)	6124	6000	2564153
1026	23.8	13.7	0.6	chr3	45615004	45615345	(152680214)	C	MER34	LTR/ERV1	(0)	542	149	2564154
205	31.6	15.2	0.0	chr3	46871964	46872058	(151423501)	+	MIR3	SINE/MIR	35	146	(62)	2566042
1137	14.9	5.8	3.6	chr3	48668164	48668384	(149627175)	+	AluJb	SINE/Alu	86	311	(1)	2569669
247	28.4	9.7	0.0	chr3	48668387	48668488	(149627071)	+	L1M5	LINE/L1	4758	4870	(1276)	2569664
504	22.3	10.3	1.5	chr3	48668540	48668707	(149626852)	+	L1M5	LINE/L1	4871	5051	(1095)	2569664
2216	9.2	0.7	2.3	chr3	49260093	49260398	(149035161)	+	AluSx4	SINE/Alu	1	301	(9)	2570934
185	27.4	4.6	3.1	chr3	49260774	49260837	(149034722)	+	MamRTE1	LINE/RTE-BovB	1410	1474	(2338)	2570935
3836	30.1	4.5	2.9	chr3	49542609	49544247	(148751312)	+	HERVFH19-int	LTR/ERV1	1221	2889	(4830)	2571599
677	14.4	1.0	1.9	chr3	50021741	50021874	(148273685)	C	AluSx3	SINE/Alu	(0)	311	179	2572468
225	20.0	0.0	0.0	chr3	50021878	50021922	(148273637)	C	L1MC	LINE/L1	(3236)	2910	2866	2572469
805	12.9	1.5	5.0	chr3	50021934	50022072	(148273487)	+	AluJb	SINE/Alu	168	301	(11)	2572470
234	16.4	10.7	1.5	chr3	50022216	50022283	(148273276)	+	L1ME3Cz	LINE/L1	918	992	(5)	2572471
1922	13.9	2.3	1.3	chr3	50130976	50131277	(148164282)	C	AluJo	SINE/Alu	(3)	309	5	2572672
34151	6.4	0.7	0.8	chr3	51850620	51855457	(146440102)	+	HERV9N-int	LTR/ERV1	1	4741	(633)	2575062
2140	8.3	0.0	0.0	chr3	52762637	52762902	(145532657)	+	AluSg	SINE/Alu	37	302	(8)	2576427
2155	17.9	9.6	6.8	chr3	52762903	52763338	(145532221)	+	MER34	LTR/ERV1	82	542	(0)	2576426
3080	12.9	9.1	0.6	chr3	53326451	53326934	(144968625)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	2577449
244	31.5	1.6	5.9	chr3	53327334	53327468	(144968091)	C	MER102a	DNA/hAT-Charlie	(124)	206	78	2577450
13	10.7	0.0	5.7	chr3	53327494	53327507	(144968052)	+	A-rich	Low_complexity	1	12	(0)	2577451
2282	12.5	0.0	0.3	chr3	53327508	53327840	(144967719)	+	AluSz	SINE/Alu	1	312	(0)	2577452
262	32.5	2.5	4.9	chr3	55810857	55810979	(142484580)	C	L1M5	LINE/L1	(400)	5724	5605	2581050
714	21.0	13.4	1.1	chr3	55811025	55811207	(142484352)	+	MER3	DNA/hAT-Charlie	1	209	(0)	2581051
264	33.1	2.1	5.4	chr3	55895361	55895507	(142400052)	+	MIRb	SINE/MIR	106	247	(21)	2581195
315	25.0	1.0	9.1	chr3	55895604	55895713	(142399846)	+	L2c	LINE/L2	3280	3380	(7)	2581197
386	33.3	13.6	2.8	chr3	57271606	57271892	(141023667)	+	Tigger19b	DNA/TcMar-Tigger	195	517	(33)	2583627
1735	20.5	7.1	6.9	chr3	57290076	57290579	(141004980)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2583659
1779	12.9	9.7	0.0	chr3	58023112	58023382	(140272177)	C	AluSz	SINE/Alu	(12)	300	1	2585213
460	21.4	11.8	0.0	chr3	58337356	58337467	(139958092)	C	L2a	LINE/L2	(0)	3426	3300	2585836
1873	16.1	2.4	0.0	chr3	58337479	58337769	(139957790)	C	AluJo	SINE/Alu	(14)	298	1	2585837
4345	6.8	2.0	2.4	chr3	59725642	59726195	(138569364)	C	MER41A	LTR/ERV1	(0)	554	3	2587959
266	16.3	0.0	0.0	chr3	61517783	61517825	(136777734)	+	L1MB5	LINE/L1	6045	6087	(87)	2590724
493	20.9	0.0	0.0	chr3	61517837	61517927	(136777632)	+	L1MB5	LINE/L1	6045	6135	(39)	2590725
1599	16.1	5.2	6.9	chr3	61517934	61518064	(136777495)	+	AluJo	SINE/Alu	1	132	(180)	2590726
2414	9.6	0.0	0.3	chr3	61518065	61518355	(136777204)	C	AluY	SINE/Alu	(21)	290	1	2590727
495	30.7	4.0	2.9	chr3	64650005	64650175	(133645384)	+	L2c	LINE/L2	3212	3384	(3)	2596079
15	24.8	0.0	2.2	chr3	64650471	64650531	(133645028)	+	A-rich	Low_complexity	1	59	(0)	2596080
17	20.1	3.9	3.8	chr3	64650508	64650558	(133645001)	+	GA-rich	Low_complexity	1	53	(0)	2596081
696	23.5	10.1	0.0	chr3	64863309	64863478	(133432081)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	2596485
659	32.5	8.2	8.0	chr3	65495487	65496036	(132799523)	C	L2b	LINE/L2	(4)	3371	2821	2597505
1881	17.1	0.7	0.7	chr3	65496037	65496340	(132799219)	C	AluJr	SINE/Alu	(7)	305	2	2597506
2177	13.8	0.0	0.0	chr3	65768138	65768434	(132527125)	+	AluSz	SINE/Alu	1	297	(15)	2597973
269	32.0	12.2	2.8	chr3	66057528	66057742	(132237817)	+	MLT1L	LTR/ERVL-MaLR	371	608	(2)	2598563
412	22.7	18.1	5.8	chr3	66057943	66058115	(132237444)	C	L1ME4b	LINE/L1	(40)	852	654	2598564
397	25.6	4.6	3.1	chr3	66058345	66058423	(132237136)	C	L1ME4b	LINE/L1	(332)	560	482	2598564
4493	17.7	2.0	2.6	chr3	68118502	68119856	(130175703)	C	L1MB2	LINE/L1	(148)	6023	4664	2601946
374	25.5	4.4	2.5	chr3	71597779	71597935	(126697624)	C	L1ME4a	LINE/L1	(0)	6124	5965	2607480
33	3.1	0.0	0.0	chr3	71597936	71597968	(126697591)	+	(GT)n	Simple_repeat	1	33	(0)	2607481
534	28.9	5.0	1.9	chr3	71597981	71598192	(126697367)	+	MIRb	SINE/MIR	50	268	(0)	2607482
487	23.8	1.9	13.5	chr3	72198821	72198946	(126096613)	+	MIRc	SINE/MIR	156	248	(14)	2608679
322	18.0	7.6	0.0	chr3	72198968	72199028	(126096531)	+	MLT1F2	LTR/ERVL-MaLR	75	140	(420)	2608681
405	28.6	2.3	1.6	chr3	72199294	72199421	(126096138)	C	MIRb	SINE/MIR	(120)	148	20	2608682
867	19.8	1.2	0.0	chr3	72199556	72199722	(126095837)	+	Charlie4a	DNA/hAT-Charlie	20	188	(320)	2608683
321	31.8	6.8	1.9	chr3	72199813	72199966	(126095593)	+	L2b	LINE/L2	3203	3364	(11)	2608684
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
303	29.9	11.2	0.8	chr3	76596439	76596566	(121698993)	+	MIRb	SINE/MIR	18	160	(108)	2615763
32951	6.7	2.1	0.2	chr3	79773347	79777503	(118518056)	+	HERVE_a-int	LTR/ERV1	3	4239	(3608)	2619899
1751	33.0	15.0	3.1	chr3	80217814	80219798	(118075761)	C	L2a	LINE/L2	(7)	3419	1164	2620480
12540	17.1	4.2	1.7	chr3	82954517	82955305	(115340254)	C	Tigger1	DNA/TcMar-Tigger	(1571)	847	22	2624031
3217	22.8	4.5	1.2	chr3	82955310	82956230	(115339329)	C	L1MB7	LINE/L1	(84)	6100	5139	2624030
1038	24.9	5.4	1.2	chr3	89538592	89539054	(108756505)	+	MER34	LTR/ERV1	1	641	(66)	2632160
1018	26.6	6.0	1.3	chr3	89539091	89539551	(108756008)	C	L1MCc	LINE/L1	(2963)	3978	3495	2632161
544	31.0	4.2	4.2	chr3	94878541	94878776	(103416783)	+	LTR38A1	LTR/ERV1	116	351	(192)	2634821
345	35.7	3.9	1.5	chr3	94878779	94878977	(103416582)	+	PABL_B-int	LTR/ERV1	6657	6860	(262)	2634822
973	27.6	5.0	9.9	chr3	94879297	94879739	(103415820)	+	LTR38	LTR/ERV1	137	556	(0)	2634823
2012	21.5	4.8	3.1	chr3	98713795	98714342	(99581217)	C	MER74A	LTR/ERVL	(0)	558	1	2639346
269	22.1	4.2	0.0	chr3	99665497	99665564	(98629995)	C	LTR78B	LTR/ERV1	(1224)	72	2	2640520
224	28.2	3.4	5.6	chr3	99665582	99665671	(98629888)	+	L2a	LINE/L2	3335	3422	(4)	2640522
2124	11.3	0.0	3.1	chr3	99665674	99665990	(98629569)	C	AluSq2	SINE/Alu	(0)	313	1	2640523
7854	14.5	2.8	0.3	chr3	103323090	103325210	(94970349)	C	L1PA16	LINE/L1	(1)	6165	3997	2645651
323	38.0	0.0	0.7	chr3	106606739	106606889	(91688670)	+	MER103C	DNA/hAT-Charlie	115	264	(33)	2649729
485	26.1	4.1	2.1	chr3	110983408	110983552	(87312007)	C	L2a	LINE/L2	(0)	3426	3279	2655943
441	17.8	5.3	0.0	chr3	110983559	110983648	(87311911)	+	L1MA3	LINE/L1	11	105	(7460)	2655944
13540	15.3	3.1	1.0	chr3	110983652	110984984	(87310575)	+	L1MA3	LINE/L1	377	2400	(5165)	2655944
2298	7.8	1.4	1.4	chr3	112552650	112552945	(85742614)	C	AluYj4	SINE/Alu	(15)	296	1	2657998
22174	6.7	1.3	0.0	chr3	113347019	113349932	(84945627)	+	HERV9N-int	LTR/ERV1	3	2953	(2421)	2659068
6240	9.6	3.7	3.7	chr3	113349932	113351305	(84944254)	+	HERV9N-int	LTR/ERV1	736	1864	(3238)	2659068
613	23.1	2.9	1.7	chr3	113364713	113364884	(84930675)	C	MER5B	DNA/hAT-Charlie	(0)	178	5	2659085
1684	2.1	0.0	0.0	chr3	120442912	120443102	(77852457)	+	L1PA3	LINE/L1	5961	6151	(4)	2669160
1946	15.9	0.7	0.7	chr3	123211469	123211757	(75083802)	C	AluJb	SINE/Alu	(23)	289	1	2673351
871	15.3	4.0	0.0	chr3	127247556	127247699	(71047860)	C	LTR38	LTR/ERV1	(163)	760	611	2679747
1180	16.8	1.9	6.6	chr3	127247688	127247971	(71047588)	C	LTR38	LTR/ERV1	(642)	281	9	2679747
1821	13.7	8.4	0.3	chr3	129801450	129801734	(68493825)	C	AluSg	SINE/Alu	(0)	310	1	2684427
560	24.1	13.7	3.1	chr3	129801735	129801778	(68493781)	C	L1ME3G	LINE/L1	(494)	430	385	2684426
230	27.7	7.8	7.8	chr3	129801997	129802086	(68493473)	+	L2c	LINE/L2	3291	3380	(7)	2684428
35939	6.1	0.2	0.3	chr3	129902413	129906802	(68388757)	+	HERVK9-int	LTR/ERVK	1637	6021	(0)	2684629
3749	7.8	2.5	0.4	chr3	129906803	129907243	(68388316)	+	MER9a3	LTR/ERVK	1	444	(68)	2684629
723	22.9	4.8	3.2	chr3	132265920	132266104	(66029455)	C	MER5A	DNA/hAT-Charlie	(1)	188	1	2688193
2027	16.3	6.3	0.0	chr3	136312147	136312472	(61983087)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	1	2694159
2309	25.0	13.1	3.6	chr3	136312473	136313996	(61981563)	+	L1MC4	LINE/L1	5324	6136	(1814)	2694149
1315	20.4	0.8	2.0	chr3	136693628	136693872	(61601687)	C	AluJb	SINE/Alu	(70)	242	1	2694863
736	19.2	5.8	0.7	chr3	141661174	141661320	(56634239)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	236	2702651
1562	8.1	0.0	0.0	chr3	141661349	141661545	(56634014)	C	AluSc8	SINE/Alu	(9)	302	106	2702652
186	17.6	2.9	0.0	chr3	141661609	141661642	(56633917)	+	MIR3	SINE/MIR	33	67	(141)	2702653
384	11.8	0.0	0.0	chr3	141661667	141661717	(56633842)	+	AluJr4	SINE/Alu	199	249	(63)	2702654
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
259	26.9	12.8	3.4	chr3	142944082	142944285	(55351274)	C	Mam_R4	LINE/Dong-R4	(1923)	1886	1661	2704958
12	21.8	2.7	0.0	chr3	142963494	142963530	(55332029)	+	A-rich	Low_complexity	1	38	(0)	2704980
26	13.8	4.3	4.2	chr3	142963601	142963669	(55331890)	+	(CGG)n	Simple_repeat	1	72	(0)	2704981
13	9.8	0.0	0.0	chr3	142963695	142963716	(55331843)	+	(GCC)n	Simple_repeat	1	22	(0)	2704982
11	20.2	3.5	6.7	chr3	142964026	142964083	(55331476)	+	G-rich	Low_complexity	1	60	(0)	2704983
37	0.0	2.5	2.4	chr3	142964228	142964267	(55331292)	+	(GT)n	Simple_repeat	1	41	(0)	2704984
450	24.7	8.5	6.9	chr3	143952650	143952823	(54342736)	C	MER5B	DNA/hAT-Charlie	(0)	178	2	2706395
555	27.7	11.9	2.5	chr3	145765667	145765984	(52529575)	C	L1M5	LINE/L1	(2751)	3395	3044	2708702
22	11.7	2.7	0.0	chr3	147810477	147810513	(50485046)	+	(AG)n	Simple_repeat	1	38	(0)	2711251
1396	21.4	6.2	3.4	chr3	147810549	147810905	(50484654)	C	MER39	LTR/ERV1	(0)	707	340	2711252
378	26.8	8.2	2.4	chr3	147810809	147810934	(50484625)	C	MER21A	LTR/ERVL	(623)	308	175	2711253
229	27.2	0.0	13.2	chr3	147810917	147811022	(50484537)	C	MER39	LTR/ERV1	(430)	277	186	2711252
765	29.7	7.7	1.7	chr3	148643169	148643524	(49652035)	C	Tigger15a	DNA/TcMar-Tigger	(334)	381	3	2712379
436	26.9	15.2	0.0	chr3	150584297	150584463	(47711096)	C	MIR	SINE/MIR	(61)	201	5	2715468
361	30.6	11.9	1.4	chr3	150584531	150584809	(47710750)	C	L1M5	LINE/L1	(535)	5589	5278	2715469
17484	22.1	3.3	3.2	chr3	151806184	151808619	(46486940)	+	HERVFH21-int	LTR/ERV1	62	2422	(4107)	2717293
1514	17.2	1.9	1.9	chr3	152469091	152469358	(45826201)	C	AluJo	SINE/Alu	(6)	306	39	2718231
13	8.5	4.0	0.0	chr3	152469359	152469383	(45826176)	+	(TTTAA)n	Simple_repeat	1	26	(0)	2718232
183	21.6	0.0	3.8	chr3	152469541	152469593	(45825966)	C	L2b	LINE/L2	(212)	3163	3113	2718233
192	40.4	4.9	4.3	chr3	152469611	152469915	(45825644)	+	L2c	LINE/L2	3047	3353	(34)	2718234
3436	16.0	3.4	1.6	chr3	154307152	154308217	(43987342)	+	L1PB4	LINE/L1	5016	6144	(12)	2720993
250	30.9	4.7	1.2	chr3	154695389	154695470	(43600089)	+	MIRc	SINE/MIR	63	147	(121)	2721523
62664	4.6	0.3	0.5	chr3	157579687	157587547	(40708012)	C	HERVE_a-int	LTR/ERV1	(0)	7847	1	2725686
1732	18.0	2.4	0.3	chr3	158675993	158676275	(39619284)	+	AluJb	SINE/Alu	3	291	(21)	2727112
321	28.2	3.3	2.5	chr3	158676285	158676404	(39619155)	+	LTR37-int	LTR/ERV1	1500	1620	(2440)	2727113
2498	7.5	0.3	0.3	chr3	161639121	161639456	(36656103)	C	L1PA8	LINE/L1	(1)	6171	5836	2731644
12	17.1	2.9	2.8	chr3	161639749	161639783	(36655776)	+	(AATTT)n	Simple_repeat	1	36	(0)	2731645
2583	34.8	3.1	3.1	chr3	163042193	163043140	(35252419)	C	MER84-int	LTR/ERV1	(1687)	3267	2325	2733338
926	33.3	6.5	6.1	chr3	163043209	163044104	(35251455)	C	MER84-int	LTR/ERV1	(2777)	2177	1278	2733338
228	35.8	3.1	6.9	chr3	163270924	163271025	(35024534)	+	MER5B	DNA/hAT-Charlie	2	99	(79)	2733573
212	33.7	10.6	1.0	chr3	163270964	163271065	(35024494)	C	MER5A	DNA/hAT-Charlie	(72)	117	5	2733574
17039	22.6	3.1	2.9	chr3	164020263	164025721	(34269838)	C	HERVFH21-int	LTR/ERV1	(1845)	5405	4	2734444
1501	13.1	7.7	9.8	chr3	167051520	167051866	(31243693)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	2738238
201	23.3	0.0	0.0	chr3	167925771	167925813	(30369746)	C	L2c	LINE/L2	(12)	3375	3333	2739371
3721	18.8	2.7	1.7	chr3	167926059	167926762	(30368797)	+	MER50	LTR/ERV1	1	711	(23)	2739372
7268	10.5	0.6	2.2	chr3	168209107	168210181	(30085378)	C	MER11C	LTR/ERVK	(14)	1057	1	2739746
719	33.2	11.1	1.3	chr3	168210249	168210839	(30084720)	C	L2b	LINE/L2	(251)	3124	2480	2739745
186	25.4	16.2	1.5	chr3	169218440	169218507	(29077052)	+	AmnSINE1	SINE/5S-Deu-L2	75	154	(421)	2741083
565	26.3	14.8	2.2	chr3	171250599	171250827	(27044732)	+	MIRc	SINE/MIR	6	268	(0)	2744249
1664	23.1	5.7	7.2	chr3	171616373	171616885	(26678674)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	2744838
218	23.4	0.0	19.0	chr3	171616994	171617072	(26678487)	C	MER5B	DNA/hAT-Charlie	(0)	178	115	2744839
295	26.7	1.3	0.0	chr3	171617087	171617161	(26678398)	+	MER5B	DNA/hAT-Charlie	50	125	(53)	2744840
342	19.5	1.2	1.2	chr3	171617167	171617249	(26678310)	C	L1ME2z	LINE/L1	(144)	6300	6218	2744841
811	27.5	0.5	1.4	chr3	172205378	172205587	(26089972)	C	MIR	SINE/MIR	(28)	234	27	2745755
13	8.5	4.0	0.0	chr3	172647634	172647658	(25647901)	+	(ACAA)n	Simple_repeat	1	26	(0)	2746450
589	21.5	1.5	0.8	chr3	172647667	172647797	(25647762)	C	MER94	DNA/hAT-Blackjack	(1)	133	2	2746451
14	0.0	0.0	0.0	chr3	173184909	173184926	(25110633)	+	(TTA)n	Simple_repeat	1	18	(0)	2747226
1110	24.4	5.5	11.8	chr3	173222452	173223021	(25072538)	C	MER39	LTR/ERV1	(0)	707	8	2747268
296	32.1	2.7	2.7	chr3	176904307	176904418	(21391141)	C	L2c	LINE/L2	(6)	3381	3270	2752261
281	22.5	4.1	0.0	chr3	181973382	181973452	(16322107)	C	MIR	SINE/MIR	(1)	261	188	2760343
472	24.1	7.6	4.2	chr3	182388731	182388895	(15906664)	+	MIR	SINE/MIR	78	248	(14)	2760970
536	28.7	4.6	1.6	chr3	182388868	182389053	(15906506)	C	MIRb	SINE/MIR	(22)	208	11	2760971
2308	8.8	0.7	0.0	chr3	184146611	184146894	(14148665)	+	AluSq2	SINE/Alu	6	291	(22)	2764100
568	31.1	7.0	6.3	chr3	184147264	184147364	(14148195)	+	HAL1	LINE/L1	4	105	(2402)	2764101
2252	9.3	1.3	1.3	chr3	184147365	184147498	(14148061)	+	AluSq2	SINE/Alu	1	133	(180)	2764102
415	22.9	9.0	8.3	chr3	186078434	186078654	(12216905)	+	MER102b	DNA/hAT-Charlie	1	228	(2200)	2767710
348	27.5	13.3	4.1	chr3	188651856	188652052	(9643507)	C	MIRc	SINE/MIR	(20)	248	31	2772247
1518	16.0	0.4	1.7	chr3	192820777	192821013	(5474546)	C	AluJr	SINE/Alu	(24)	288	55	2778504
13770	22.1	5.9	3.0	chr3	193855360	193858499	(4437060)	+	ERVL-E-int	LTR/ERVL	28	3265	(2402)	2780122
17	9.6	0.0	5.4	chr3	194351713	194351749	(3943810)	+	(TTTG)n	Simple_repeat	1	37	(0)	2780986
2075	12.0	0.3	0.0	chr3	194581696	194581994	(3713565)	+	AluSz	SINE/Alu	1	300	(12)	2781434
2140	13.3	1.8	4.9	chr3	196789420	196789469	(1506090)	C	MER1B	DNA/hAT-Charlie	(1)	338	299	2785769
2387	8.8	3.0	0.7	chr3	196789470	196789764	(1505795)	C	AluSq2	SINE/Alu	(11)	302	1	2785770
13	20.0	0.0	2.8	chr3	196968855	196968890	(1326669)	+	G-rich	Low_complexity	1	36	(0)	2786135
456	24.7	10.8	1.7	chr4	517500	517676	(189696879)	C	L2a	LINE/L2	(1276)	2143	1949	2789212
1981	15.4	0.3	3.2	chr4	1507397	1507708	(188706847)	C	AluJb	SINE/Alu	(1)	311	9	2790260
882	8.3	0.0	0.0	chr4	5069186	5069293	(185145262)	C	AluYj4	SINE/Alu	(5)	306	199	2795977
1099	21.3	2.9	0.0	chr4	5069506	5069740	(185144815)	+	MIR	SINE/MIR	6	247	(15)	2795978
6904	16.5	0.8	2.6	chr4	6809564	6811383	(183403172)	+	L1MA4A	LINE/L1	4122	5912	(391)	2799137
279	14.3	6.7	1.8	chr4	6811386	6811442	(183403113)	+	L1MA4A	LINE/L1	6208	6267	(36)	2799137
1978	15.9	0.0	0.7	chr4	6811444	6811744	(183402811)	C	AluJb	SINE/Alu	(13)	299	1	2799138
26	0.0	0.0	0.0	chr4	6811748	6811772	(183402783)	+	(T)n	Simple_repeat	1	25	(0)	2799139
313	19.4	8.9	0.0	chr4	6811774	6811845	(183402710)	+	MLT1I	LTR/ERVL-MaLR	326	404	(7)	2799136
1059	24.1	10.2	4.9	chr4	17477270	17477757	(172736798)	C	LTR33A	LTR/ERVL	(3)	517	1	2816279
201	29.1	16.7	0.9	chr4	17477758	17477796	(172736759)	C	MIRb	SINE/MIR	(163)	105	67	2816278
821	21.3	10.0	1.6	chr4	25087137	25087327	(165127228)	C	MER3	DNA/hAT-Charlie	(0)	209	1	2828274
681	31.6	3.1	1.2	chr4	25087419	25087671	(165126884)	+	MIR	SINE/MIR	2	259	(3)	2828275
543	31.6	8.7	6.5	chr4	25127574	25128279	(165086276)	+	L2a	LINE/L2	2626	3396	(30)	2828344
316	7.9	0.0	0.0	chr4	25128392	25128429	(165086126)	+	FLAM_A	SINE/Alu	62	99	(43)	2828345
43	0.0	2.3	0.0	chr4	25128430	25128472	(165086083)	+	(AACAAA)n	Simple_repeat	1	44	(0)	2828346
232	23.9	6.7	3.5	chr4	26140022	26140109	(164074446)	+	MIR	SINE/MIR	72	168	(62)	2830453
679	25.8	12.1	4.1	chr4	26140314	26140556	(164073999)	C	MLT1K	LTR/ERVL-MaLR	(10)	585	321	2830454
268	21.0	4.8	2.9	chr4	26171735	26171837	(164042718)	C	MIR3	SINE/MIR	(23)	185	81	2830516
253	35.6	7.1	1.9	chr4	26193690	26194043	(164020512)	+	L2a	LINE/L2	2758	3126	(261)	2830560
1693	22.5	5.8	2.5	chr4	34600669	34601115	(155613440)	C	MLT1C	LTR/ERVL-MaLR	(3)	464	2	2842327
1502	11.6	2.6	0.4	chr4	38619711	38619935	(151594620)	+	MER30	DNA/hAT-Charlie	1	230	(0)	2848108
667	22.0	0.0	0.0	chr4	39750576	39750693	(150463862)	C	AluJr	SINE/Alu	(194)	118	1	2850376
2020	14.5	0.3	2.2	chr4	39750728	39751045	(150463510)	C	AluJb	SINE/Alu	(0)	312	1	2850377
2552	7.7	0.0	0.0	chr4	39829670	39829980	(150384575)	+	AluY	SINE/Alu	1	311	(0)	2850571
967	18.6	0.0	2.3	chr4	39830224	39830395	(150384160)	C	AluJo	SINE/Alu	(46)	266	99	2850572
2215	10.8	0.3	1.0	chr4	39830420	39830724	(150383831)	C	AluSz	SINE/Alu	(9)	303	1	2850573
12	18.1	0.0	3.0	chr4	40333630	40333662	(149880893)	+	GA-rich	Low_complexity	1	33	(0)	2851777
338	27.4	11.8	0.7	chr4	40333815	40333991	(149880564)	+	MIR3	SINE/MIR	2	193	(15)	2851778
341	28.3	2.0	1.0	chr4	40347889	40347988	(149866567)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	462	2851809
12	12.0	3.7	0.0	chr4	40837215	40837241	(149377314)	+	(CAGG)n	Simple_repeat	1	28	(0)	2852936
182	31.1	1.6	0.0	chr4	40837444	40837504	(149377051)	+	MIR3	SINE/MIR	113	174	(34)	2852937
313	28.6	16.9	4.0	chr4	41691958	41692183	(148522372)	+	MIR	SINE/MIR	1	261	(1)	2854467
196	22.9	0.0	9.4	chr4	41692140	41692192	(148522363)	+	L2c	LINE/L2	3336	3383	(4)	2854468
1800	16.6	1.0	2.9	chr4	42106775	42107088	(148107467)	C	AluJr	SINE/Alu	(4)	308	1	2855102
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
21	18.9	2.1	0.0	chr4	52038234	52038281	(138176274)	+	(GCC)n	Simple_repeat	1	49	(0)	2865622
301	21.0	5.7	1.3	chr4	52981590	52981682	(137232873)	C	MIRc	SINE/MIR	(68)	162	69	2867073
458	34.3	13.2	0.9	chr4	52981748	52982071	(137232484)	C	L2	LINE/L2	(508)	2911	2542	2867074
202	24.3	3.6	10.1	chr4	53165481	53165599	(137048956)	+	L2a	LINE/L2	2887	2997	(422)	2867340
810	24.8	4.9	3.7	chr4	53165587	53165829	(137048726)	+	L2a	LINE/L2	3181	3426	(0)	2867340
3596	11.5	1.2	7.8	chr4	56217219	56217869	(133996686)	C	MER4B	LTR/ERV1	(0)	610	4	2872251
1806	18.2	7.2	3.4	chr4	56217870	56218238	(133996317)	C	MLT1C	LTR/ERVL-MaLR	(67)	400	7	2872250
718	13.1	24.9	7.1	chr4	56327328	56327589	(133886966)	+	L1MA8	LINE/L1	5984	6291	(0)	2872439
13	0.0	5.0	0.0	chr4	56327858	56327877	(133886678)	+	(TTTA)n	Simple_repeat	1	21	(0)	2872440
18350	21.0	2.6	2.9	chr4	69828661	69832374	(120382181)	C	HERV3-int	LTR/ERV1	(4722)	3704	1	2889822
2003	13.8	3.0	0.3	chr4	70754898	70755194	(119459361)	C	AluSx1	SINE/Alu	(7)	305	1	2891122
2367	8.8	0.0	0.3	chr4	70927258	70927552	(119287003)	+	AluSx	SINE/Alu	2	295	(17)	2891502
419	26.3	7.4	7.9	chr4	76988240	76988429	(113226126)	+	L2b	LINE/L2	3198	3386	(1)	2900188
2335	24.5	5.4	3.4	chr4	78556907	78557520	(111657035)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	1	2902309
392	21.7	8.4	1.6	chr4	78781857	78781978	(111432577)	C	L2b	LINE/L2	(1222)	2197	2067	2902738
192	35.5	1.3	2.6	chr4	78782314	78782391	(111432164)	+	L2c	LINE/L2	3257	3333	(54)	2902741
201	28.8	6.3	9.2	chr4	86420013	86420142	(103794413)	C	L2b	LINE/L2	(36)	3351	3226	2913814
435	26.5	3.5	0.0	chr4	87047820	87047955	(103166600)	C	L1ME2	LINE/L1	(1)	6163	6023	2914837
1347	17.1	0.8	0.4	chr4	88090722	88090985	(102123570)	+	L1MD3	LINE/L1	7730	7994	(1)	2916527
1877	32.4	3.9	3.8	chr4	88451253	88452962	(101761593)	+	HERV4_I-int	LTR/ERV1	6264	8223	(213)	2917191
303	26.9	1.1	1.1	chr4	89065890	89065983	(101148572)	+	ERV24B_Prim-int	LTR/ERV1	2308	2401	(5212)	2918072
812	19.2	0.0	2.3	chr4	89066166	89066295	(101148260)	+	FLAM_C	SINE/Alu	1	127	(16)	2918073
2372	10.6	1.0	0.0	chr4	89066301	89066593	(101147962)	+	AluSp	SINE/Alu	1	296	(17)	2918074
1797	19.4	0.0	1.0	chr4	89848093	89848401	(100366154)	+	AluJb	SINE/Alu	1	306	(6)	2919211
52896	13.3	0.7	0.1	chr4	91089490	91097079	(99117476)	C	HERVE_a-int	LTR/ERV1	(0)	7847	210	2920780
2722	33.5	2.5	3.8	chr4	91773790	91774801	(98439754)	C	MER83B-int	LTR/ERV1	(1637)	3317	2320	2921519
308	30.4	0.0	0.0	chr4	91774944	91775035	(98439520)	C	MER83B-int	LTR/ERV1	(2775)	2179	2088	2921519
280	22.7	5.1	2.6	chr4	92086192	92086268	(98128287)	C	L2a	LINE/L2	(11)	3415	3337	2921859
20457	16.2	1.6	4.1	chr4	96480786	96485379	(93729176)	C	L1MA3	LINE/L1	(3056)	4509	16	2927722
1162	25.3	10.1	3.5	chr4	97549509	97549942	(92664613)	+	MLT1C	LTR/ERVL-MaLR	2	467	(0)	2929051
1861	28.7	1.4	0.4	chr4	98029625	98030168	(92184387)	C	ERVL-E-int	LTR/ERVL	(2437)	3277	2710	2929581
953	27.8	1.2	1.2	chr4	98030159	98030409	(92184146)	C	ERVL-E-int	LTR/ERVL	(3222)	2445	2195	2929581
2992	13.3	1.0	0.6	chr4	98030437	98030919	(92183636)	+	L1PREC2	LINE/L1	4539	5023	(1123)	2929582
21028	29.4	3.9	3.5	chr4	99013920	99021508	(91193047)	C	HERVIP10B3-int	LTR/ERV1	(0)	7603	1	2931140
1802	23.1	7.2	1.6	chr4	101403837	101404325	(88810230)	+	LTR40a	LTR/ERVL	1	518	(1)	2934325
31	0.0	0.0	0.0	chr4	101404329	101404355	(88810200)	+	(AC)n	Simple_repeat	1	27	(0)	2934326
18	7.2	3.3	0.0	chr4	101404356	101404381	(88810174)	+	(TA)n	Simple_repeat	2	28	(0)	2934327
1587	18.9	0.8	0.8	chr4	102660490	102660753	(87553802)	C	AluJr	SINE/Alu	(47)	265	2	2935980
777	29.3	5.2	2.7	chr4	105064382	105064734	(85149821)	C	ERV3-16A3_I-int	LTR/ERVL	(1760)	3466	3181	2938972
6734	20.9	3.5	1.9	chr4	107338901	107341699	(82872856)	+	L1MA4	LINE/L1	1245	4061	(3501)	2941940
186	27.4	9.7	2.3	chr4	108377060	108377145	(81837410)	C	MamRTE1	LINE/RTE-BovB	(3237)	575	483	2943384
3646	21.3	3.1	3.4	chr4	108721343	108722433	(81492122)	+	MER34-int	LTR/ERV1	8	1100	(7107)	2943949
1789	17.1	2.4	0.3	chr4	108827535	108827820	(81386735)	C	AluJr	SINE/Alu	(20)	292	1	2944134
16	17.7	0.0	2.5	chr4	110143137	110143176	(80071379)	+	A-rich	Low_complexity	1	40	(0)	2946030
3952	18.3	2.7	1.3	chr4	111331933	111332709	(78881846)	+	L1PB4	LINE/L1	5361	6148	(8)	2947723
1966	11.7	0.0	0.0	chr4	111332726	111332982	(78881573)	+	AluSq2	SINE/Alu	34	290	(23)	2947724
249	30.1	7.0	7.0	chr4	111655792	111655934	(78558621)	+	Tigger15a	DNA/TcMar-Tigger	215	357	(358)	2948068
414	24.5	9.7	2.5	chr4	111655977	111656177	(78558378)	+	Tigger15a	DNA/TcMar-Tigger	490	706	(9)	2948069
258	32.0	6.4	10.0	chr4	112716397	112716467	(77498088)	+	MIRc	SINE/MIR	191	244	(24)	2949702
934	21.4	0.0	1.2	chr4	112716562	112716729	(77497826)	C	FAM	SINE/Alu	(19)	166	1	2949704
1702	28.4	5.1	4.5	chr4	114263126	114264269	(75950286)	C	L1ME3F	LINE/L1	(273)	5970	4822	2951860
1798	22.3	1.2	3.4	chr4	117517231	117517647	(72696908)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	2955794
18	16.9	0.0	0.0	chr4	117517648	117517663	(72696892)	+	(T)n	Simple_repeat	1	16	(0)	2955795
2930	21.9	6.9	0.1	chr4	117517691	117518391	(72696164)	C	L1PB4	LINE/L1	(0)	6156	5405	2955796
1220	9.9	0.6	1.6	chr4	118067754	118067962	(72146593)	+	L1PA8	LINE/L1	5991	6172	(0)	2956398
2383	10.6	0.0	0.0	chr4	118328791	118329091	(71885464)	C	AluSg	SINE/Alu	(9)	301	1	2956730
1253	21.5	9.3	2.1	chr4	118329092	118329201	(71885354)	C	AluJr	SINE/Alu	(179)	133	1	2956729
1632	24.4	4.6	4.7	chr4	121590692	121591349	(68623206)	C	Kanga2_a	DNA/TcMar-Tc2	(1)	887	231	2961264
13	12.8	5.9	0.0	chr4	121591588	121591621	(68622934)	+	(ACCACCA)n	Simple_repeat	1	36	(0)	2961265
2083	29.0	4.4	1.7	chr4	124682352	124682908	(65531647)	C	L1M5	LINE/L1	(3464)	2682	2110	2965600
482	13.3	14.3	0.0	chr4	127891991	127892080	(62322475)	+	U6	snRNA	1	105	(2)	2969699
342	27.3	4.5	8.5	chr4	128496160	128496323	(61718232)	C	LTR90B	LTR	(0)	796	640	2970805
514	34.4	5.5	1.4	chr4	128496547	128496911	(61717644)	C	LTR90B	LTR	(371)	425	45	2970805
1147	19.6	1.0	0.5	chr4	130353137	130353330	(59861225)	+	AluJr4	SINE/Alu	1	195	(117)	2973305
13	16.5	0.0	0.0	chr4	130353353	130353379	(59861176)	+	(AAC)n	Simple_repeat	1	27	(0)	2973306
1016	15.3	1.0	0.5	chr4	130353446	130353636	(59860919)	+	L1MA4A	LINE/L1	6106	6297	(6)	2973307
3059	16.5	1.5	0.0	chr4	130807908	130808433	(59406122)	+	L1PA16	LINE/L1	5622	6155	(11)	2973862
733	30.1	4.9	5.6	chr4	131567344	131567747	(58646808)	+	MER68-int	LTR/ERVL	1223	1553	(1437)	2974772
382	30.9	5.4	2.8	chr4	131567878	131568020	(58646535)	+	MER68-int	LTR/ERVL	3736	3882	(1648)	2974772
555	28.2	5.3	2.2	chr4	131568109	131568354	(58646201)	+	HERVL40-int	LTR/ERVL	4062	4290	(1240)	2974773
16	22.1	0.0	0.0	chr4	133521879	133521910	(56692645)	+	A-rich	Low_complexity	1	32	(0)	2977079
6128	22.9	3.1	1.6	chr4	133683361	133684755	(56529800)	+	L1P4e	LINE/L1	497	1906	(4879)	2977264
617	32.2	6.8	6.2	chr4	134319654	134320106	(55894449)	C	LTR16A1	LTR/ERVL	(0)	456	1	2977963
5604	8.3	4.2	0.4	chr4	138621787	138622536	(51592019)	C	LTR17	LTR/ERV1	(0)	780	1	2983130
35301	5.7	0.3	0.1	chr4	138622539	138627057	(51587498)	C	HERV17-int	LTR/ERV1	(2)	8624	4096	2983130
1790	16.8	1.4	0.0	chr4	139186107	139186392	(51028163)	+	AluJb	SINE/Alu	1	290	(22)	2984111
1710	10.0	4.0	16.9	chr4	139186417	139186552	(51028003)	+	AluSz	SINE/Alu	1	136	(176)	2984112
1919	15.4	5.2	0.9	chr4	139976925	139977270	(50237285)	+	MLT1A0	LTR/ERVL-MaLR	1	362	(3)	2985543
772	22.9	4.1	2.8	chr4	139977271	139977365	(50237190)	+	MER20	DNA/hAT-Charlie	124	219	(0)	2985542
8395	15.9	4.8	0.8	chr4	142669085	142669795	(47544760)	+	L1M2	LINE/L1	4412	5124	(1019)	2989248
795	11.8	1.5	0.7	chr4	142669808	142669943	(47544612)	+	L1M2	LINE/L1	5464	5600	(691)	2989248
500	24.6	2.4	0.0	chr4	142669952	142670073	(47544482)	+	MER44D	DNA/TcMar-Tigger	1	125	(580)	2989250
302	16.9	0.0	15.7	chr4	142670091	142670160	(47544395)	+	Tigger7	DNA/TcMar-Tigger	209	267	(2224)	2989251
492	20.0	3.1	0.0	chr4	142670160	142670254	(47544301)	+	Tigger7	DNA/TcMar-Tigger	2394	2491	(0)	2989252
18	16.9	0.0	0.0	chr4	147971432	147971464	(42243091)	+	GA-rich	Low_complexity	1	33	(0)	2996529
206	30.6	6.9	3.2	chr4	147971668	147971792	(42242763)	C	L2	LINE/L2	(456)	2963	2834	2996530
283	28.6	11.1	0.9	chr4	148075147	148075259	(42139296)	C	MIR	SINE/MIR	(61)	201	76	2996670
1261	22.4	9.0	5.8	chr4	148954369	148954818	(41259737)	C	MLT1C	LTR/ERVL-MaLR	(1)	466	1	2997821
366	27.6	10.6	7.5	chr4	152762281	152762480	(37452075)	C	L1M5	LINE/L1	(566)	5558	5352	3003541
268	23.8	19.2	8.6	chr4	152762811	152762823	(37451732)	C	L1MD	LINE/L1	(1342)	4804	4794	3003542
1951	12.3	0.3	6.6	chr4	152762824	152763156	(37451399)	C	AluSz	SINE/Alu	(0)	312	1	3003543
485	15.3	4.6	18.6	chr4	153293851	153294027	(36920528)	+	MER20	DNA/hAT-Charlie	41	191	(28)	3004389
13	24.0	3.5	3.3	chr4	153656501	153656558	(36557997)	+	(CTCTGTT)n	Simple_repeat	1	60	(0)	3005017
1315	16.6	4.7	0.4	chr4	154963877	154964118	(35250437)	+	MSTB1	LTR/ERVL-MaLR	180	432	(0)	3006753
730	20.0	2.0	0.2	chr4	154964119	154964274	(35250281)	C	MSTD	LTR/ERVL-MaLR	(233)	175	3	3006755
833	30.8	12.2	1.5	chr4	154964275	154964892	(35249663)	+	L2a	LINE/L2	2430	3134	(241)	3006756
46	20.0	0.0	0.0	chr4	155328428	155328512	(34886043)	+	(AT)n	Simple_repeat	1	85	(0)	3007233
485	28.6	5.0	2.1	chr4	156967044	156967236	(33247319)	+	Tigger15a	DNA/TcMar-Tigger	83	281	(434)	3009491
38	5.0	0.0	0.0	chr4	157220633	157220674	(32993881)	+	(TG)n	Simple_repeat	1	42	(0)	3009823
23	14.7	4.4	0.0	chr4	157220686	157220730	(32993825)	+	GA-rich	Low_complexity	1	47	(0)	3009824
17	21.4	6.8	0.0	chr4	157220731	157220742	(32993813)	+	(GTGA)n	Simple_repeat	3	63	(0)	3009825
349	34.0	13.5	3.6	chr4	163501837	163502056	(26712499)	+	L2b	LINE/L2	3110	3354	(21)	3018152
299	22.2	10.2	0.0	chr4	165806118	165806205	(24408350)	+	LTR29	LTR/ERV1	4	100	(544)	3021614
1175	25.4	5.9	4.7	chr4	165806174	165806624	(24407931)	+	MER39	LTR/ERV1	251	707	(0)	3021615
677	25.5	10.0	0.4	chr4	165806663	165806934	(24407621)	+	L1M5	LINE/L1	5366	5666	(458)	3021616
525	24.8	12.0	1.0	chr4	174185866	174186065	(16028490)	C	L2a	LINE/L2	(1)	3425	3201	3032621
1481	25.8	10.4	0.6	chr4	174186069	174186536	(16028019)	C	LTR40a	LTR/ERVL	(0)	519	1	3032622
339	29.2	2.8	12.0	chr4	176076346	176076703	(14137852)	C	L1M6	LINE/L1	(5022)	1474	1151	3035044
305	30.8	9.1	13.0	chr4	176076760	176077058	(14137497)	C	L1M6	LINE/L1	(5618)	878	593	3035044
2779	16.8	2.5	3.2	chr4	176741978	176742591	(13471964)	C	L1PA17	LINE/L1	(1)	6130	5504	3035948
1070	30.3	0.4	0.4	chr4	178734985	178735259	(11479296)	C	LTR40a	LTR/ERVL	(0)	519	245	3038584
19	0.0	0.0	0.0	chr4	178735260	178735280	(11479275)	+	(T)n	Simple_repeat	1	21	(0)	3038585
283	27.6	4.4	0.0	chr4	179356870	179356956	(10857599)	C	MLT1I	LTR/ERVL-MaLR	(32)	379	289	3039399
381	35.0	3.3	4.1	chr4	179357011	179357281	(10857274)	C	MLT1I	LTR/ERVL-MaLR	(142)	269	1	3039399
376	28.9	12.2	9.8	chr4	182234379	182234456	(7980099)	C	L2c	LINE/L2	(4)	3383	3306	3043141
434	28.6	5.1	5.1	chr4	183143063	183143239	(7071316)	C	Tigger19a	DNA/TcMar-Tigger	(76)	247	71	3044475
283	23.5	4.5	1.2	chr4	183143334	183143419	(7071136)	C	MER117	DNA/hAT-Charlie	(108)	89	1	3044476
1939	15.2	0.3	0.3	chr4	183143526	183143808	(7070747)	+	AluJb	SINE/Alu	1	283	(29)	3044477
1349	26.5	16.4	5.0	chr4	184506644	184507226	(5707329)	+	MLT2F	LTR/ERVL	1	663	(0)	3046694
37109	4.5	0.3	0.3	chr4	184915488	184920320	(5294235)	C	HERV9-int	LTR/ERV1	(0)	8436	2642	3047381
1366	4.3	0.0	0.6	chr4	184920320	184920481	(5294074)	C	HERV9-int	LTR/ERV1	(4001)	2117	1957	3047381
2252	12.2	0.0	0.0	chr4	185133499	185133793	(5080762)	+	AluSz	SINE/Alu	1	295	(17)	3047747
3590	15.5	3.4	4.9	chr4	185133794	185133812	(5080743)	+	L1MB2	LINE/L1	6132	6135	(36)	3047745
1898	13.7	0.7	5.3	chr4	185133813	185134133	(5080422)	+	AluJo	SINE/Alu	2	307	(5)	3047748
3590	15.5	3.4	4.9	chr4	185134134	185134178	(5080377)	+	L1MB2	LINE/L1	6136	6171	(0)	3047745
823	15.4	0.0	2.2	chr4	185134211	185134346	(5080209)	C	AluJr	SINE/Alu	(179)	133	1	3047749
484	17.9	0.9	3.5	chr4	185134348	185134463	(5080092)	C	L1MEc	LINE/L1	(3941)	2459	2347	3047750
498	25.4	1.6	1.6	chr4	186372608	186372735	(3841820)	C	L2a	LINE/L2	(19)	3407	3280	3049573
403	23.9	7.2	0.8	chr4	189897585	189897702	(316853)	+	L1PB4	LINE/L1	6028	6153	(3)	3054389
169	19.9	1.9	4.8	chr4	189897705	189898171	(316384)	+	A-rich	Low_complexity	1	476	(0)	3054390
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
2324	18.4	4.2	2.4	chr5	240537	241003	(181297256)	C	L1PB4	LINE/L1	(2)	6154	5679	3055184
325	26.1	3.3	0.0	chr5	266955	267042	(181271217)	C	MER3	DNA/hAT-Charlie	(118)	91	1	3055229
851	21.3	10.2	1.2	chr5	1827725	1827966	(179710293)	+	MLT1A0	LTR/ERVL-MaLR	1	266	(99)	3056694
189	29.3	8.7	8.1	chr5	2431768	2431927	(179106332)	C	MIR	SINE/MIR	(0)	262	102	3057276
364	34.6	11.8	4.2	chr5	5449395	5449705	(176088554)	+	HAL1ME	LINE/L1	13	350	(2115)	3060581
329	13.5	1.9	0.0	chr5	14665953	14666004	(166872255)	C	MSTB	LTR/ERVL-MaLR	(373)	53	1	3072509
15511	12.1	2.1	1.2	chr5	14798490	14800718	(166737541)	+	Tigger1	DNA/TcMar-Tigger	48	2302	(116)	3072670
1977	16.6	0.7	0.3	chr5	14800719	14801025	(166737234)	C	AluJo	SINE/Alu	(4)	308	1	3072671
196	33.0	6.4	0.0	chr5	16598475	16598577	(164939682)	+	L2c	LINE/L2	3031	3140	(247)	3075225
1383	18.6	0.3	9.2	chr5	16598896	16599222	(164939037)	+	AluJr	SINE/Alu	1	298	(14)	3075226
230	29.8	6.0	2.0	chr5	16782125	16782271	(164755988)	+	MIR3	SINE/MIR	8	160	(48)	3075510
1048	17.4	3.4	0.0	chr5	16782272	16782443	(164755816)	C	MER58A	DNA/hAT-Charlie	(0)	224	47	3075511
1254	8.7	9.2	7.6	chr5	16911365	16911451	(164626808)	+	MER30	DNA/hAT-Charlie	1	105	(125)	3075761
1906	16.9	0.3	0.0	chr5	16911452	16911753	(164626506)	+	AluJb	SINE/Alu	2	304	(8)	3075762
1995	13.2	0.0	0.0	chr5	17146833	17147104	(164391155)	C	AluSx1	SINE/Alu	(39)	273	2	3076322
16	22.1	0.0	0.0	chr5	26566789	26566820	(154971439)	+	A-rich	Low_complexity	1	32	(0)	3088706
2324	17.5	4.8	2.6	chr5	26567173	26567822	(154970437)	C	MER50	LTR/ERV1	(48)	734	1	3088707
3023	14.7	5.0	1.8	chr5	27620098	27620604	(153917655)	+	MER1A	DNA/hAT-Charlie	2	525	(4)	3090130
190	27.1	2.8	6.7	chr5	28131283	28131357	(153406902)	C	L3	LINE/CR1	(1595)	2504	2433	3090750
325	32.8	9.0	0.0	chr5	28131497	28131679	(153406580)	C	ERV24_Prim-int	LTR/ERV1	(5157)	2418	2218	3090748
20	13.7	0.0	8.8	chr5	31700281	31700338	(149837921)	+	GA-rich	Low_complexity	1	52	(0)	3095392
265	36.8	0.9	2.6	chr5	31700586	31700702	(149837557)	C	MIR	SINE/MIR	(85)	177	63	3095393
440	27.4	0.9	0.9	chr5	31700746	31700859	(149837400)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	3095394
230	26.6	3.7	1.2	chr5	31720344	31720423	(149817836)	C	L2c	LINE/L2	(93)	3294	3213	3095437
3462	13.4	3.6	3.4	chr5	31720444	31721082	(149817177)	C	MER39B	LTR/ERV1	(13)	640	1	3095438
1788	17.9	1.0	0.0	chr5	37139565	37139849	(144398410)	C	AluJo	SINE/Alu	(24)	288	1	3103875
1960	12.0	0.3	5.3	chr5	37348143	37348307	(144189952)	+	AluSx1	SINE/Alu	137	286	(26)	3104314
28	0.0	0.0	0.0	chr5	37348308	37348334	(144189925)	+	(AAAT)n	Simple_repeat	1	27	(0)	3104316
15	16.9	0.0	0.0	chr5	39627312	39627338	(141910921)	+	GA-rich	Low_complexity	1	27	(0)	3107841
11	30.1	0.0	3.6	chr5	39627339	39627366	(141910893)	+	(TGAGAG)n	Simple_repeat	2	56	(0)	3107842
333	30.0	8.0	0.7	chr5	39627479	39627629	(141910630)	C	MER45C	DNA/hAT-Tip100	(0)	953	791	3107843
945	24.1	18.5	4.7	chr5	55311139	55311604	(126226655)	C	L1MC5a	LINE/L1	(261)	2516	2183	3123050
1271	19.2	4.3	0.0	chr5	55311620	55311906	(126226353)	+	MER33	DNA/hAT-Charlie	1	300	(24)	3123051
301	27.5	10.3	0.8	chr5	57343188	57343319	(124194940)	+	MER5A	DNA/hAT-Charlie	43	188	(1)	3126640
3439	2.7	0.0	0.0	chr5	59325877	59326278	(122211981)	+	L1PA4	LINE/L1	5752	6153	(2)	3129357
586	21.3	0.0	3.2	chr5	59326426	59326551	(122211708)	+	MER33	DNA/hAT-Charlie	13	134	(190)	3129358
328	23.2	2.9	2.9	chr5	59326543	59326644	(122211615)	+	MER33	DNA/hAT-Charlie	223	324	(0)	3129359
1925	17.8	2.8	4.1	chr5	59411406	59411798	(122126461)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	3	3129464
28	0.0	0.0	0.0	chr5	59649906	59649932	(121888327)	+	(T)n	Simple_repeat	1	27	(0)	3129774
742	31.1	4.7	6.2	chr5	64642637	64642892	(116895367)	+	LTR33	LTR/ERVL	140	380	(135)	3136700
1472	19.9	6.3	1.2	chr5	64642893	64643238	(116895021)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3136701
2290	13.5	6.0	9.7	chr5	64796197	64796679	(116741580)	C	MLT2C2	LTR/ERVL	(0)	464	1	3136931
32	2.7	2.6	0.0	chr5	64796735	64796772	(116741487)	+	(TCCC)n	Simple_repeat	1	39	(0)	3136932
74	15.0	3.9	1.2	chr5	64796775	64796975	(116741284)	+	(TTCC)n	Simple_repeat	1	206	(0)	3136933
22	31.1	2.0	2.9	chr5	68881599	68881698	(112656561)	+	(TAGA)n	Simple_repeat	1	102	(0)	3142843
13	20.0	2.0	5.8	chr5	68892775	68892825	(112645434)	+	(CCTGCT)n	Simple_repeat	1	52	(0)	3142867
235	22.9	16.5	2.0	chr5	68893165	68893262	(112644997)	C	L1ME4c	LINE/L1	(22)	6102	5988	3142868
10921	14.3	7.2	8.0	chr5	69249858	69250901	(112287358)	C	L1M1	LINE/L1	(5213)	2352	891	3143595
438	20.0	5.3	0.0	chr5	71894554	71894643	(109643616)	+	MIR	SINE/MIR	63	157	(105)	3148219
569	22.7	11.9	1.2	chr5	71895169	71895333	(109642926)	C	MIR3	SINE/MIR	(4)	204	20	3148220
840	18.4	11.1	4.5	chr5	74153824	74153999	(107384260)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	3151566
409	30.2	1.7	0.0	chr5	74176211	74176326	(107361933)	+	MIRc	SINE/MIR	41	158	(110)	3151606
1500	11.9	6.3	0.4	chr5	75658774	75659027	(105879232)	C	L1MB3	LINE/L1	(3)	6180	5911	3153891
529	25.9	4.6	6.1	chr5	75659028	75659170	(105879089)	C	L1ME4a	LINE/L1	(293)	5831	5691	3153890
1252	24.8	4.4	7.6	chr5	75659600	75660071	(105878188)	C	L1ME4b	LINE/L1	(10)	882	427	3153892
416	20.3	29.8	0.0	chr5	76365687	76365833	(105172426)	+	MLT1J	LTR/ERVL-MaLR	11	202	(310)	3154890
325	26.3	2.6	0.0	chr5	76368224	76368299	(105169960)	C	MLT1M	LTR/ERVL-MaLR	(462)	210	133	3154900
2019	15.5	1.0	1.6	chr5	78009173	78009476	(103528783)	+	AluJo	SINE/Alu	1	302	(10)	3157500
358	32.7	2.5	1.9	chr5	78010306	78010464	(103527795)	+	MER5A	DNA/hAT-Charlie	9	168	(21)	3157501
538	28.8	12.8	0.0	chr5	81433964	81434161	(100104098)	C	MIRc	SINE/MIR	(20)	248	22	3163154
2038	7.5	9.4	1.4	chr5	81434376	81434657	(100103602)	+	AluSp	SINE/Alu	1	307	(6)	3163155
2384	7.8	3.0	0.0	chr5	83251253	83251547	(98286712)	+	AluSg	SINE/Alu	1	304	(6)	3165705
1685	18.0	12.8	1.6	chr5	85554600	85554978	(95983281)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3168656
7480	17.8	4.6	4.5	chr5	85554979	85555764	(95982495)	+	L1PA8A	LINE/L1	6389	7214	(505)	3168653
465	29.8	8.9	3.0	chr5	86653201	86653432	(94884827)	+	MIRc	SINE/MIR	8	254	(14)	3170080
225	25.7	1.3	5.1	chr5	86653439	86653516	(94884743)	+	UCON132b	DNA/hAT-Tip100	23	97	(51)	3170081
16	19.1	6.5	1.5	chr5	88421630	88421665	(93116594)	+	A-rich	Low_complexity	1	39	(0)	3172304
1886	15.9	0.0	3.0	chr5	88421666	88421790	(93116469)	+	AluJr	SINE/Alu	1	123	(189)	3172305
2339	11.8	0.0	0.0	chr5	88421791	88422096	(93116163)	C	AluSz	SINE/Alu	(6)	306	1	3172306
1877	13.8	1.4	0.7	chr5	91293612	91293894	(90244365)	+	AluJb	SINE/Alu	11	295	(17)	3175967
2401	21.7	11.3	13.0	chr5	91293997	91294025	(90244234)	+	MER21C	LTR/ERVL	9	32	(906)	3175968
2183	13.2	0.0	0.0	chr5	91294026	91294327	(90243932)	+	AluSx	SINE/Alu	2	303	(9)	3175969
698	34.4	2.6	0.4	chr5	93020615	93020839	(88517420)	C	MIRb	SINE/MIR	(17)	251	22	3178161
373	27.3	10.3	0.1	chr5	93020959	93021108	(88517151)	C	L2a	LINE/L2	(3)	3423	3211	3178162
2533	6.8	0.3	0.3	chr5	94472464	94472772	(87065487)	+	AluYf1	SINE/Alu	1	309	(2)	3179866
16	5.3	0.0	0.0	chr5	96090739	96090758	(85447501)	+	(GT)n	Simple_repeat	1	20	(0)	3182118
480	24.3	16.5	9.8	chr5	96091091	96091206	(85447053)	+	MIRb	SINE/MIR	8	121	(147)	3182119
2242	11.4	0.0	0.7	chr5	96091207	96091504	(85446755)	C	AluSx	SINE/Alu	(16)	296	1	3182120
3801	16.4	9.2	1.5	chr5	104116277	104117005	(77421254)	C	MER54B	LTR/ERVL	(0)	793	3	3192319
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
17	15.5	5.6	0.0	chr5	109866672	109866707	(71671552)	+	(TA)n	Simple_repeat	1	38	(0)	3199563
245	25.2	7.3	2.3	chr5	114342641	114342770	(67195489)	C	Tigger15a	DNA/TcMar-Tigger	(91)	624	488	3205489
1056	9.2	0.0	0.0	chr5	114342861	114343001	(67195258)	C	L1PA11	LINE/L1	(21)	6153	6013	3205490
7472	10.7	0.9	1.9	chr5	119436210	119437276	(62100983)	+	MER11C	LTR/ERVK	1	1057	(14)	3212316
4031	15.9	2.7	0.7	chr5	121728096	121728792	(59809467)	+	MER50	LTR/ERV1	1	711	(23)	3215049
1531	18.1	2.5	5.4	chr5	121728794	121729126	(59809133)	+	MER4D	LTR/ERV1	581	903	(0)	3215050
313	25.7	2.9	0.0	chr5	121774044	121774144	(59764115)	C	L1ME3	LINE/L1	(850)	5296	5193	3215111
625	24.9	9.1	7.6	chr5	121774152	121774442	(59763817)	C	LTR48B	LTR/ERV1	(9)	778	383	3215112
455	26.8	0.0	2.4	chr5	121774505	121774630	(59763629)	C	MER34A	LTR/ERV1	(448)	123	1	3215113
355	18.8	2.3	7.6	chr5	122796139	122796230	(58742029)	+	U13_	snRNA	22	108	(0)	3216448
2339	14.0	9.4	3.0	chr5	124864834	124865190	(56673069)	+	L1MB4	LINE/L1	5794	6171	(9)	3219286
1399	18.9	3.8	1.5	chr5	124865344	124865602	(56672657)	+	AluJo	SINE/Alu	1	265	(47)	3219288
28	12.0	8.0	1.2	chr5	124865606	124865619	(56672640)	+	A-rich	Low_complexity	1	16	(0)	3219289
70	1.5	0.0	0.0	chr5	124865620	124865686	(56672573)	+	(GAAGGAAG)n	Simple_repeat	1	67	(0)	3219290
8331	11.8	1.7	1.8	chr5	125239137	125240437	(56297822)	C	HSMAR2	DNA/TcMar-Mariner	(0)	1302	3	3219800
12143	9.4	0.6	1.3	chr5	125663209	125664928	(55873331)	C	HERVFH19-int	LTR/ERV1	(3395)	4324	2617	3220314
16299	11.7	3.8	0.3	chr5	125664930	125667298	(55870961)	C	HERVFH19-int	LTR/ERV1	(5263)	2456	1	3220314
3364	11.4	1.2	0.2	chr5	125967495	125967986	(55570273)	C	LOR1a	LTR/ERV1	(0)	497	1	3220628
215	33.3	15.3	2.4	chr5	126437093	126437387	(55100872)	C	L2c	LINE/L2	(563)	2856	2517	3221184
1739	17.4	2.4	1.4	chr5	131279788	131280075	(50258184)	+	AluJb	SINE/Alu	1	291	(21)	3227685
1916	15.8	12.8	0.8	chr5	131843890	131844265	(49693994)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3228628
9434	22.6	7.2	6.4	chr5	131844268	131844988	(49693271)	+	L1MB7	LINE/L1	134	838	(5625)	3228629
362	27.2	5.2	0.1	chr5	133066496	133066685	(48471574)	C	L1ME4b	LINE/L1	(2190)	587	414	3230498
258	29.4	0.0	4.7	chr5	135538556	135538662	(45999597)	+	MLT1N2	LTR/ERVL-MaLR	436	537	(25)	3234439
184	28.1	0.0	0.0	chr5	135538748	135538804	(45999455)	C	L2b	LINE/L2	(22)	3353	3297	3234440
250	34.8	6.1	2.5	chr5	135538854	135539012	(45999247)	C	MIR3	SINE/MIR	(21)	187	23	3234441
1435	16.7	2.7	5.2	chr5	136680756	136681061	(44857198)	C	L1MA10	LINE/L1	(9)	6325	6024	3235984
2276	17.1	5.0	3.3	chr5	136681062	136681510	(44856749)	+	MSTB2	LTR/ERVL-MaLR	1	457	(0)	3235985
1435	16.7	2.7	5.2	chr5	136681511	136681551	(44856708)	C	L1MA10	LINE/L1	(311)	6023	5987	3235984
335	10.1	4.2	0.7	chr5	136681552	136681620	(44856639)	C	L1MA10	LINE/L1	(729)	5425	5361	3235984
487	16.2	2.8	1.9	chr5	136681620	136681726	(44856533)	C	L1M5	LINE/L1	(857)	5587	5480	3235986
351	23.5	14.7	2.6	chr5	137771999	137772225	(43766034)	C	Charlie17	DNA/hAT-Charlie	(1)	2915	2657	3237494
252	17.5	3.4	0.0	chr5	137772239	137772295	(43765964)	C	L1MC4a	LINE/L1	(0)	7882	7824	3237495
5188	20.3	8.1	5.6	chr5	137772308	137773722	(43764537)	C	L1MC4	LINE/L1	(143)	7899	6447	3237496
51636	4.9	0.5	0.7	chr5	139503787	139510234	(42028025)	+	HERV9-int	LTR/ERV1	40	6479	(1957)	3240907
761	13.8	0.0	4.1	chr5	140682097	140682219	(40856040)	+	AluJr	SINE/Alu	1	118	(194)	3243056
668	29.9	6.4	0.4	chr5	140682275	140682545	(40855714)	C	L2a	LINE/L2	(322)	3104	2818	3243055
881	20.5	0.0	0.0	chr5	140682556	140682706	(40855553)	C	FAM	SINE/Alu	(19)	166	16	3243057
325	22.5	0.0	0.0	chr5	140682712	140682782	(40855477)	+	L1MC	LINE/L1	5701	5771	(2111)	3243058
2246	11.4	0.3	1.6	chr5	142278367	142278682	(39259577)	+	AluSz	SINE/Alu	1	312	(0)	3245623
466	25.7	16.4	1.1	chr5	143170609	143170789	(38367470)	C	MIR	SINE/MIR	(41)	221	8	3247266
1055	17.5	0.6	0.0	chr5	143733332	143733514	(37804745)	C	MER5A	DNA/hAT-Charlie	(0)	189	6	3248155
360	22.4	0.0	0.0	chr5	145977379	145977445	(35560814)	C	MIR	SINE/MIR	(0)	262	196	3251635
301	34.1	9.6	4.3	chr5	145977414	145977551	(35560708)	+	MER91A	DNA/hAT-Tip100	8	153	(43)	3251636
255	20.3	2.3	0.0	chr5	145977663	145977725	(35560534)	C	MIRc	SINE/MIR	(165)	103	36	3251635
341	27.3	3.9	0.0	chr5	145977796	145977894	(35560365)	+	L2a	LINE/L2	3322	3424	(2)	3251637
544	25.0	3.8	0.0	chr5	145977894	145978021	(35560238)	C	MIRb	SINE/MIR	(114)	154	22	3251638
247	25.6	1.1	10.9	chr5	145978035	145978135	(35560124)	C	L2c	LINE/L2	(6)	3381	3291	3251639
2496	6.4	0.0	3.2	chr5	146250771	146251083	(35287176)	C	AluSg7	SINE/Alu	(6)	303	1	3252208
643	23.0	11.1	1.0	chr5	148165148	148165349	(33372910)	C	MER67C	LTR/ERV1	(8)	506	282	3255482
1364	19.0	5.0	6.1	chr5	148165328	148165733	(33372526)	C	MER67C	LTR/ERV1	(306)	405	1	3255482
196	27.2	10.5	8.1	chr5	149387440	149387489	(32150770)	C	MIRb	SINE/MIR	(2)	266	217	3257623
2002	15.2	0.0	2.2	chr5	149387490	149387805	(32150454)	+	AluJr	SINE/Alu	4	312	(0)	3257624
196	27.2	10.5	8.1	chr5	149387806	149387902	(32150357)	C	MIRb	SINE/MIR	(52)	216	115	3257623
349	26.3	5.8	1.9	chr5	150333138	150333366	(31204893)	+	MIRc	SINE/MIR	30	267	(1)	3259711
13	25.3	3.7	1.8	chr5	150947134	150947187	(30591072)	+	G-rich	Low_complexity	1	56	(0)	3260889
230	35.4	5.9	0.6	chr5	154151936	154152111	(27386148)	C	L2a	LINE/L2	(30)	3396	3211	3266524
966	20.6	0.0	0.0	chr5	154152115	154152279	(27385980)	+	AluJr	SINE/Alu	137	301	(11)	3266525
381	33.9	17.8	2.1	chr5	154152309	154152642	(27385617)	+	L1ME3B	LINE/L1	168	565	(5677)	3266526
16400	17.4	1.5	0.6	chr5	154640032	154642817	(26895442)	C	HERVK-int	LTR/ERVK	(3983)	3553	743	3267663
1756	23.9	8.2	3.0	chr5	155837962	155838530	(25699729)	C	L1MC5	LINE/L1	(12)	9292	8692	3269886
1488	22.3	2.6	2.6	chr5	155838532	155838865	(25699394)	+	Charlie1b	DNA/hAT-Charlie	2	343	(180)	3269887
41715	6.4	0.4	2.0	chr5	157880442	157886689	(23651570)	+	HERV9NC-int	LTR/ERV1	40	6117	(1)	3273526
449	20.0	7.4	0.0	chr5	158448581	158448680	(23089579)	C	MER81	DNA/hAT-Blackjack	(6)	108	1	3274611
1151	26.6	5.0	7.6	chr5	158448927	158449204	(23089055)	C	LTR86A2	LTR/ERVL	(68)	440	164	3274612
2185	12.4	0.3	0.7	chr5	159947060	159947366	(21590893)	+	AluSx1	SINE/Alu	2	307	(5)	3277038
883	28.4	1.9	4.2	chr5	159947367	159947493	(21590766)	C	MIRb	SINE/MIR	(142)	126	4	3277037
288	29.8	12.4	5.1	chr5	160192327	160192531	(21345728)	+	L2a	LINE/L2	3183	3422	(4)	3277612
246	23.9	11.7	4.2	chr5	160192589	160192706	(21345553)	C	L2b	LINE/L2	(6)	3369	3242	3277618
1456	15.9	0.5	0.0	chr5	160192831	160193044	(21345215)	+	AluJb	SINE/Alu	2	216	(96)	3277619
782	25.4	0.0	0.5	chr5	166160065	166160254	(15378005)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	3286330
2396	7.5	0.0	0.3	chr5	168233046	168233338	(13304921)	+	AluSc5	SINE/Alu	1	292	(17)	3289592
244	24.0	20.2	0.0	chr5	168233357	168233431	(13304828)	+	L2b	LINE/L2	3258	3351	(24)	3289593
2857	5.4	0.8	1.1	chr5	168233680	168234035	(13304224)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3289594
187	33.3	12.0	1.5	chr5	168904003	168904136	(12634123)	C	MIR3	SINE/MIR	(55)	153	4	3290916
547	32.2	11.6	2.4	chr5	170267103	170267803	(11270456)	+	L2b	LINE/L2	2595	3375	(0)	3293284
392	19.9	17.0	13.6	chr5	170487422	170487521	(11050738)	C	L1MB7	LINE/L1	(30)	6154	6056	3293696
1992	15.2	1.3	0.0	chr5	170487522	170487817	(11050442)	C	AluJb	SINE/Alu	(12)	300	1	3293698
392	19.9	17.0	13.6	chr5	170487818	170487886	(11050373)	C	L1MB7	LINE/L1	(129)	6055	5969	3293696
14289	18.5	2.1	3.0	chr5	171001489	171005144	(10533115)	C	HERVH-int	LTR/ERV1	(2564)	5149	1482	3294606
222	29.5	2.2	0.0	chr5	172449271	172449345	(9088914)	C	MIRc	SINE/MIR	(83)	147	69	3297463
216	31.4	2.8	0.9	chr5	172449391	172449496	(9088763)	+	MIR	SINE/MIR	57	164	(98)	3297464
923	21.6	9.6	2.0	chr5	172449503	172449753	(9088506)	+	L1M5	LINE/L1	5254	5525	(598)	3297465
219	34.9	6.7	0.8	chr5	172773419	172773545	(8764714)	+	MIR1_Amn	SINE/MIR	71	205	(25)	3298159
190	35.9	9.6	6.0	chr5	172774072	172774222	(8764037)	+	MIRc	SINE/MIR	2	158	(110)	3298160
995	21.1	13.6	0.6	chr5	172823164	172823488	(8714771)	C	L1MC4	LINE/L1	(1211)	6831	6458	3298281
1400	24.0	9.0	3.3	chr5	172823607	172824359	(8713900)	C	L2a	LINE/L2	(0)	3426	2632	3298286
687	30.5	8.8	2.0	chr5	172861025	172861539	(8676720)	+	L2a	LINE/L2	2855	3425	(1)	3298373
450	32.1	0.0	1.4	chr5	172861536	172861674	(8676585)	+	MIRb	SINE/MIR	121	257	(11)	3298374
2776	2.3	0.0	0.0	chr5	173062745	173063046	(8475213)	C	AluYa5	SINE/Alu	(9)	302	1	3298853
234	25.3	12.2	1.2	chr5	173884608	173884687	(7653572)	+	MER91C	DNA/hAT-Tip100	26	115	(25)	3300511
802	26.6	11.4	0.2	chr5	174157426	174157762	(7380497)	+	L2a	LINE/L2	2999	3426	(0)	3300973
28400	2.4	0.1	0.1	chr5	175397770	175403801	(6134458)	+	L1PA2	LINE/L1	124	6155	(0)	3303366
954	21.9	1.6	0.0	chr5	175403827	175404009	(6134250)	+	MER5A	DNA/hAT-Charlie	1	186	(3)	3303367
2583	15.1	2.1	2.3	chr5	175404046	175404478	(6133781)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3303368
495	29.1	2.2	4.4	chr5	176494346	176494528	(5043731)	C	MIRb	SINE/MIR	(11)	257	79	3305390
861	18.4	3.4	0.9	chr5	177205515	177205744	(4332515)	C	L1MB2	LINE/L1	(0)	6171	5936	3306939
1286	22.1	2.0	4.5	chr5	177205817	177205989	(4332270)	C	AluJb	SINE/Alu	(6)	306	135	3306940
2167	14.8	0.0	0.0	chr5	177205990	177206299	(4331960)	C	AluSz	SINE/Alu	(2)	310	1	3306941
9059	13.0	5.0	1.3	chr5	177233627	177234432	(4303827)	+	Tigger4	DNA/TcMar-Tigger	1160	2012	(719)	3307009
2243	13.1	0.3	0.7	chr5	177234433	177234738	(4303521)	+	AluSx1	SINE/Alu	1	305	(7)	3307010
9059	13.0	5.0	1.3	chr5	177234739	177235444	(4302815)	+	Tigger4	DNA/TcMar-Tigger	2013	2731	(0)	3307009
529	29.9	5.5	0.8	chr5	177339926	177340185	(4198074)	+	L1MB4	LINE/L1	1065	1337	(4905)	3307210
375	10.6	33.6	2.0	chr5	177340326	177340476	(4197783)	C	L1PA16	LINE/L1	(1)	6165	5965	3307211
2198	9.9	2.8	0.0	chr5	177340496	177340777	(4197482)	+	AluSz	SINE/Alu	1	290	(22)	3307212
1732	17.3	7.1	0.8	chr5	178180544	178180898	(3357361)	+	LTR9D	LTR/ERV1	175	553	(92)	3308731
36	0.0	0.0	0.0	chr5	178180904	178180936	(3357323)	+	(TTTGTT)n	Simple_repeat	1	33	(0)	3308732
2024	12.3	0.0	2.8	chr5	178180937	178181221	(3357038)	C	AluSx1	SINE/Alu	(29)	283	7	3308733
297	38.0	0.0	0.0	chr5	178641869	178642005	(2896254)	C	ERVL-int	LTR/ERVL	(2542)	3215	3079	3309541
1843	31.6	3.9	2.0	chr5	178642151	178642433	(2895826)	C	HERV16-int	LTR/ERVL	(3819)	1177	884	3309542
2564	18.9	1.5	2.3	chr5	178642434	178642909	(2895350)	C	MER70A	LTR/ERVL	(0)	472	1	3309543
240	35.3	8.0	3.2	chr5	179170449	179170638	(2367621)	C	L3	LINE/CR1	(115)	3984	3785	3310446
26	0.0	3.0	2.9	chr5	179800131	179800163	(1738096)	+	(GCAGG)n	Simple_repeat	1	34	(0)	3311608
1489	18.2	3.7	4.8	chr5	181116734	181117007	(421252)	+	LTR9A1	LTR/ERV1	271	638	(90)	3313674
2336	9.6	2.3	0.0	chr5	181117008	181117309	(420950)	+	AluSg	SINE/Alu	1	309	(1)	3313675
3078	21.9	6.2	0.3	chr6	470450	470856	(170335123)	C	MER44C	DNA/TcMar-Tigger	(295)	438	1	3314853
16372	16.0	1.6	3.1	chr6	3167305	3170584	(167635395)	+	HERVH-int	LTR/ERV1	942	4234	(3479)	3318507
2492	8.4	0.0	0.0	chr6	4098601	4098885	(166707094)	C	AluY	SINE/Alu	(26)	285	1	3319960
274	22.0	0.0	9.2	chr6	5195815	5195879	(165610100)	+	L2b	LINE/L2	3256	3314	(61)	3321671
405	31.9	2.9	0.0	chr6	5195959	5196124	(165609855)	C	MIR	SINE/MIR	(3)	259	89	3321672
314	28.4	5.5	3.7	chr6	5196404	5196564	(165609415)	+	MIR	SINE/MIR	13	176	(86)	3321673
258	34.4	13.9	0.2	chr6	5308139	5308439	(165497540)	C	L2b	LINE/L2	(358)	3061	2691	3321838
806	26.9	4.3	1.5	chr6	5308447	5308650	(165497329)	C	MER5C1	DNA/hAT-Charlie	(2)	261	52	3321839
1983	19.1	3.8	0.3	chr6	5308753	5309104	(165496875)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3321840
475	18.3	0.0	0.0	chr6	9128000	9128081	(161677898)	+	MLT1E1	LTR/ERVL-MaLR	2	83	(571)	3327687
249	26.8	18.6	3.1	chr6	9128163	9128289	(161677690)	+	MLT1E1	LTR/ERVL-MaLR	240	390	(234)	3327687
28	0.0	0.0	0.0	chr6	12115351	12115377	(158690602)	+	(T)n	Simple_repeat	1	27	(0)	3332213
17	15.6	0.0	0.0	chr6	14638477	14638505	(156167474)	+	A-rich	Low_complexity	1	29	(0)	3336313
706	21.7	1.5	0.0	chr6	15383169	15383297	(155422682)	C	FLAM_A	SINE/Alu	(10)	132	2	3337876
290	29.6	5.6	1.5	chr6	15749986	15750122	(155055857)	+	MIRb	SINE/MIR	126	268	(0)	3338375
18048	22.1	3.0	3.0	chr6	17321688	17326937	(153479042)	C	HERVFH21-int	LTR/ERV1	(1196)	5333	74	3340927
2784	3.5	0.0	0.0	chr6	17598904	17599192	(153206787)	C	AluY	SINE/Alu	(22)	289	1	3341452
3148	13.9	5.9	6.7	chr6	17599193	17599412	(153206567)	+	MER39B	LTR/ERV1	433	648	(5)	3341450
2154	13.5	0.3	0.0	chr6	19661612	19661900	(151144079)	+	AluSx	SINE/Alu	1	290	(22)	3344737
23	16.7	0.0	0.0	chr6	19662001	19662040	(151143939)	+	A-rich	Low_complexity	1	40	(0)	3344738
1257	23.4	8.2	5.6	chr6	19662160	19662656	(151143323)	C	MER39	LTR/ERV1	(0)	707	48	3344739
348	22.9	11.1	0.0	chr6	19903298	19903393	(150902586)	C	MLT1O	LTR/ERVL-MaLR	(5)	537	430	3345080
1879	16.9	0.7	0.0	chr6	20131910	20132176	(150673803)	C	AluJb	SINE/Alu	(39)	273	5	3345448
504	19.3	7.9	13.6	chr6	20132177	20132242	(150673737)	+	MER5A1	DNA/hAT-Charlie	103	166	(0)	3345447
1748	17.7	10.4	1.7	chr6	20132474	20132876	(150673103)	+	L1M4	LINE/L1	4859	5300	(846)	3345449
1500	21.5	7.5	6.9	chr6	21321511	21322022	(149483957)	+	MER39	LTR/ERV1	1	666	(41)	3347465
13	26.0	0.0	0.0	chr6	24995411	24995451	(145810528)	+	G-rich	Low_complexity	1	41	(0)	3352907
2430	8.4	0.3	0.0	chr6	26649702	26649997	(144155982)	C	AluSp	SINE/Alu	(11)	302	6	3355618
560	21.0	6.9	1.9	chr6	26649998	26650258	(144155721)	+	L1MC1	LINE/L1	5572	5826	(2454)	3355608
6077	14.2	5.2	5.8	chr6	26650270	26651257	(144154722)	+	L1MC	LINE/L1	3966	4964	(1182)	3355619
4363	21.9	11.8	6.6	chr6	27463289	27463955	(143342024)	+	L1ME3	LINE/L1	1015	1861	(4554)	3356922
886	21.5	6.4	4.2	chr6	27463956	27464169	(143341810)	C	MER20	DNA/hAT-Charlie	(0)	219	1	3356926
1831	14.6	1.0	4.9	chr6	30836276	30836439	(139969540)	+	AluJb	SINE/Alu	134	297	(15)	3362344
1733	18.2	4.6	5.6	chr6	30836440	30836502	(139969477)	+	MLT1A	LTR/ERVL-MaLR	315	371	(3)	3362343
484	23.7	5.5	1.3	chr6	30836551	30836708	(139969271)	+	MamGypLTR1b	LTR/Gypsy	586	750	(32)	3362346
1362	29.4	4.7	4.0	chr6	30837014	30837033	(139968946)	C	L1MC4a	LINE/L1	(1784)	7520	7502	3362347
1744	13.7	4.9	1.4	chr6	30837034	30837311	(139968668)	C	AluJr	SINE/Alu	(24)	288	1	3362348
290	29.5	1.9	0.0	chr6	36811642	36811746	(133994233)	C	Charlie15a	DNA/hAT-Charlie	(17)	207	101	3373341
2323	10.9	0.0	0.0	chr6	36811822	36812124	(133993855)	+	AluSx	SINE/Alu	1	303	(9)	3373342
258	26.3	2.3	1.9	chr6	37780296	37780400	(133025579)	C	MIRb	SINE/MIR	(127)	141	33	3375340
839	26.5	2.3	2.1	chr6	37790495	37790720	(133015259)	+	MIRb	SINE/MIR	2	230	(38)	3375366
198	20.5	0.0	2.5	chr6	37790758	37790797	(133015182)	C	MIRc	SINE/MIR	(167)	101	63	3375367
276	25.1	1.4	8.9	chr6	37790857	37790959	(133015020)	+	L2c	LINE/L2	3277	3387	(0)	3375368
283	34.6	2.2	11.1	chr6	41609868	41610173	(129195806)	C	L2c	LINE/L2	(2)	3385	3108	3381468
343	36.5	8.8	3.9	chr6	41610255	41610367	(129195612)	C	L2c	LINE/L2	(463)	2956	2850	3381468
2237	10.6	0.0	0.7	chr6	41610368	41610651	(129195328)	+	AluSx1	SINE/Alu	1	283	(29)	3381469
2139	10.8	0.3	3.3	chr6	42384972	42385276	(128420703)	C	AluSz	SINE/Alu	(16)	296	1	3383145
643	36.8	5.6	3.5	chr6	44857903	44858271	(125947708)	+	L2b	LINE/L2	2999	3375	(0)	3387846
560	22.2	10.6	5.6	chr6	44858304	44858446	(125947533)	C	MIR	SINE/MIR	(2)	260	110	3387848
1409	30.0	17.1	1.8	chr6	47950225	47951139	(122854840)	C	L2a	LINE/L2	(557)	2862	1779	3392512
290	27.4	1.2	1.2	chr6	52559110	52559194	(118246785)	+	MER103C	DNA/hAT-Charlie	153	237	(60)	3398720
650	26.5	4.7	1.0	chr6	52891928	52892133	(117913846)	+	MER20	DNA/hAT-Charlie	2	215	(4)	3399218
269	30.9	7.7	0.0	chr6	52892172	52892255	(117913724)	C	MIR3	SINE/MIR	(85)	123	33	3399219
1748	14.1	5.6	1.6	chr6	53860881	53861191	(116944788)	+	L1PA15	LINE/L1	5842	6165	(0)	3400843
236	24.6	19.8	11.2	chr6	53861216	53861375	(116944604)	+	MER5B	DNA/hAT-Charlie	1	177	(1)	3400844
261	28.8	7.8	0.0	chr6	53861448	53861565	(116944414)	+	MER5A	DNA/hAT-Charlie	58	185	(4)	3400845
289	35.5	1.1	1.1	chr6	54058238	54058331	(116747648)	C	L2b	LINE/L2	(4)	3371	3278	3401129
498	32.1	0.0	4.7	chr6	54058332	54058501	(116747478)	+	MER91A	DNA/hAT-Tip100	22	183	(13)	3401130
1282	32.3	9.6	7.6	chr6	55213419	55214319	(115591660)	+	L1MB1	LINE/L1	675	1560	(5005)	3402654
15	0.0	0.0	0.0	chr6	55860587	55860603	(114945376)	+	(AG)n	Simple_repeat	1	17	(0)	3403440
260	27.0	7.4	2.0	chr6	56677151	56677252	(114128727)	+	MIR	SINE/MIR	149	256	(6)	3404441
19	21.4	7.5	0.0	chr6	56677268	56677334	(114128645)	+	(TATC)n	Simple_repeat	1	72	(0)	3404442
1662	16.7	3.9	1.1	chr6	56677335	56677609	(114128370)	C	AluJr	SINE/Alu	(29)	283	1	3404443
1409	21.1	10.4	5.0	chr6	64669870	64670387	(106135592)	+	MER67C	LTR/ERV1	1	514	(0)	3412168
17540	12.4	1.5	1.5	chr6	66794904	66797608	(104008371)	C	Charlie3	DNA/hAT-Charlie	(0)	2706	2	3414736
601	29.9	5.8	3.6	chr6	68386449	68386888	(102419091)	C	L1M3de	LINE/L1	(6519)	134	2	3416605
508	21.4	8.2	2.6	chr6	68386963	68387216	(102418763)	C	L1MA7	LINE/L1	(3795)	3767	3461	3416599
281	25.2	10.5	5.6	chr6	71383056	71383181	(99422798)	+	L1ME3G	LINE/L1	782	914	(10)	3420499
286	19.4	10.6	13.4	chr6	71383209	71383353	(99422626)	+	MIRb	SINE/MIR	32	176	(92)	3420500
2140	13.6	0.3	2.6	chr6	71383402	71383748	(99422231)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3420501
1104	24.0	5.6	8.0	chr6	71723042	71723534	(99082445)	C	MER39	LTR/ERV1	(22)	685	233	3420988
810	17.4	0.7	0.7	chr6	76671711	76671849	(94134130)	+	MER2	DNA/TcMar-Tigger	207	345	(0)	3427948
282	28.1	7.0	4.8	chr6	76671869	76672036	(94133943)	+	MLT1J	LTR/ERVL-MaLR	230	401	(111)	3427949
737	25.8	4.3	2.5	chr6	79278906	79279108	(91526871)	+	MER58A	DNA/hAT-Charlie	2	208	(16)	3431036
309	28.9	10.1	2.1	chr6	79279122	79279266	(91526713)	+	L3	LINE/CR1	2820	2977	(1122)	3431032
309	34.9	15.7	0.0	chr6	79279260	79279431	(91526548)	C	L2c	LINE/L2	(8)	3379	3176	3431037
441	20.4	1.0	6.4	chr6	79279440	79279549	(91526430)	C	MER31A	LTR/ERV1	(153)	332	229	3431038
616	37.0	10.3	2.9	chr6	79279576	79280469	(91525510)	C	L2c	LINE/L2	(259)	3128	2154	3431037
4742	15.0	9.6	4.0	chr6	80042944	80044043	(90761936)	C	L1MC1	LINE/L1	(1)	6332	5188	3432116
1774	19.0	1.3	6.3	chr6	87030844	87031254	(83774725)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3440942
38	12.3	0.0	0.0	chr6	87031377	87031438	(83774541)	+	(GGTT)n	Simple_repeat	1	62	(0)	3440943
1913	15.2	1.8	0.3	chr6	87031439	87031720	(83774259)	C	AluJr	SINE/Alu	(25)	287	2	3440944
796	20.7	14.4	10.7	chr6	87588234	87588365	(83217614)	+	MER110A	LTR/ERV1	39	186	(282)	3441827
1827	15.3	1.3	2.3	chr6	87588366	87588673	(83217306)	C	AluJr4	SINE/Alu	(7)	305	1	3441828
796	21.2	13.5	9.3	chr6	87588674	87588993	(83216986)	+	MER110A	LTR/ERV1	187	491	(0)	3441827
36	0.0	0.0	0.0	chr6	90359836	90359866	(80446113)	+	(GT)n	Simple_repeat	1	31	(0)	3446276
874	32.2	11.5	6.8	chr6	97055051	97055516	(73750463)	+	L2	LINE/L2	1309	1820	(1599)	3454490
15	18.4	4.7	0.0	chr6	98825548	98825590	(71980389)	+	(CTCCTCC)n	Simple_repeat	1	45	(0)	3456768
236	40.8	8.0	2.5	chr6	100540602	100540885	(70265094)	C	L2b	LINE/L2	(4)	3371	3071	3459126
190	20.0	0.0	10.0	chr6	100901865	100901914	(69904065)	C	MIRb	SINE/MIR	(15)	253	209	3459623
186	27.7	0.0	0.0	chr6	105325337	105325383	(65480596)	+	MIR1_Amn	SINE/MIR	63	109	(121)	3465265
207	32.0	9.0	4.7	chr6	105959150	105959277	(64846702)	C	L2c	LINE/L2	(257)	3130	2997	3466170
311	35.0	10.9	2.2	chr6	105959275	105959499	(64846480)	+	L2b	LINE/L2	3124	3370	(5)	3466171
20	8.8	0.0	5.0	chr6	105992453	105992492	(64813487)	+	(CAAAA)n	Simple_repeat	1	40	(0)	3466236
236	30.2	6.7	2.3	chr6	108306722	108306850	(62499129)	C	L3	LINE/CR1	(396)	3703	3569	3470369
2252	12.2	0.0	1.0	chr6	108307001	108307311	(62498668)	C	AluSg	SINE/Alu	(2)	308	1	3470371
1511	23.9	11.8	1.7	chr6	109137676	109138435	(61667544)	C	L2a	LINE/L2	(0)	3426	2568	3471717
181	23.3	0.0	0.0	chr6	110397569	110397611	(60408368)	+	MIRb	SINE/MIR	148	190	(78)	3473581
2629	15.5	3.3	0.2	chr6	111197579	111197991	(59607988)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3475202
2237	13.3	0.3	0.0	chr6	111198005	111198297	(59607682)	+	AluSz	SINE/Alu	1	294	(18)	3475203
339	33.7	19.2	0.0	chr6	111406238	111406726	(59399253)	C	L2	LINE/L2	(337)	3082	2478	3475538
277	31.0	14.4	0.0	chr6	111406858	111406970	(59399009)	C	MIRb	SINE/MIR	(8)	260	129	3475539
737	14.0	0.0	1.8	chr6	111407009	111407122	(59398857)	+	AluJr4	SINE/Alu	182	293	(19)	3475540
523	32.8	9.6	7.9	chr6	111407193	111407653	(59398326)	C	L2	LINE/L2	(1010)	2409	1926	3475538
897	35.9	5.3	5.0	chr6	111477271	111477944	(59328035)	C	L2b	LINE/L2	(39)	3336	2647	3475658
664	14.5	27.4	3.0	chr6	111491494	111491657	(59314322)	+	MER20	DNA/hAT-Charlie	1	219	(0)	3475689
233	23.5	10.5	0.0	chr6	111491838	111491905	(59314074)	+	L2a	LINE/L2	3351	3426	(0)	3475690
8388	19.7	1.4	0.5	chr6	115000002	115001524	(55804455)	+	HERV17-int	LTR/ERV1	2241	3776	(4850)	3480828
1439	21.4	3.4	1.9	chr6	115001517	115001839	(55804140)	+	HERV17-int	LTR/ERV1	8299	8626	(0)	3480828
25	7.7	0.0	4.4	chr6	116669715	116669725	(54136254)	+	(GTAT)n	Simple_repeat	1	11	(0)	3482909
662	19.5	1.7	0.0	chr6	116669726	116669838	(54136141)	C	FRAM	SINE/Alu	(24)	152	38	3482910
579	30.0	18.0	1.4	chr6	116669895	116670077	(54135902)	C	L2a	LINE/L2	(5)	3421	3212	3482911
2434	8.7	0.0	3.4	chr6	116670078	116670400	(54135579)	+	AluSx1	SINE/Alu	1	312	(0)	3482912
2076	13.8	11.7	1.6	chr6	117152672	117153055	(53652924)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3483533
1521	20.3	3.6	2.0	chr6	117153056	117153262	(53652717)	+	AluJb	SINE/Alu	99	306	(6)	3483532
229	21.5	16.0	0.0	chr6	117153274	117153431	(53652548)	+	Charlie7	DNA/hAT-Charlie	2382	2569	(43)	3483534
13	20.1	5.0	0.0	chr6	121466282	121466321	(49339658)	+	(TTGTT)n	Simple_repeat	1	42	(0)	3489051
492	24.3	6.8	0.0	chr6	121466334	121466485	(49339494)	C	L1MC5a	LINE/L1	(275)	2502	2340	3489049
249	5.6	0.0	0.0	chr6	121466684	121466719	(49339260)	+	Alu	SINE/Alu	257	292	(9)	3489052
2477	8.5	0.0	0.3	chr6	121466894	121467198	(49338781)	C	AluSg4	SINE/Alu	(6)	304	1	3489053
14	19.4	4.9	0.0	chr6	123329802	123329842	(47476137)	+	(TAA)n	Simple_repeat	1	43	(0)	3491556
2125	14.6	0.0	0.3	chr6	124834548	124834856	(45971123)	+	AluSz	SINE/Alu	1	308	(4)	3493460
240	36.2	9.7	2.3	chr6	129183472	129183734	(41622245)	+	L2c	LINE/L2	2884	3170	(217)	3499122
188	25.4	2.7	7.8	chr6	129328208	129328284	(41477695)	C	MamRTE1	LINE/RTE-BovB	(2161)	1651	1579	3499295
22319	8.7	1.3	0.7	chr6	129879891	129881362	(40924617)	C	L1PA8A	LINE/L1	(2367)	4094	2639	3500067
3503	5.2	0.9	1.8	chr6	130630795	130631242	(40174737)	+	MLT2A1	LTR/ERVL	1	444	(0)	3501173
280	36.3	4.7	1.8	chr6	133198615	133198841	(37607138)	C	L2	LINE/L2	(444)	2975	2742	3504920
315	33.5	6.6	2.1	chr6	133358226	133358414	(37447565)	+	MIRb	SINE/MIR	4	201	(67)	3505140
671	29.7	7.9	4.1	chr6	134072027	134072391	(36733588)	+	MamGyp-int	LTR/Gypsy	71	450	(4653)	3506125
1624	22.5	10.6	0.7	chr6	134072601	134073007	(36732972)	C	MLT1C	LTR/ERVL-MaLR	(3)	464	13	3506126
1702	10.2	15.2	0.0	chr6	134852794	134853049	(35952930)	C	AluSq2	SINE/Alu	(11)	302	1	3507566
274	35.8	0.0	0.0	chr6	138515759	138515853	(32290126)	C	L2c	LINE/L2	(228)	3159	3065	3513087
275	28.2	12.1	3.1	chr6	138516316	138516443	(32289536)	+	LTR67B	LTR/ERVL	472	612	(8)	3513088
2184	12.6	0.7	3.9	chr6	138738794	138739103	(32066876)	+	AluSx1	SINE/Alu	1	300	(12)	3513443
1836	34.3	6.1	6.1	chr6	138739104	138739184	(32066795)	+	ERVL-E-int	LTR/ERVL	977	1041	(4626)	3513441
1899	14.7	6.9	1.1	chr6	138739185	138739470	(32066509)	C	AluJo	SINE/Alu	(4)	308	5	3513444
2393	12.4	0.0	0.0	chr6	139048552	139048858	(31757121)	+	AluSx	SINE/Alu	2	308	(4)	3514018
308	23.3	6.2	3.2	chr6	139048884	139048976	(31757003)	C	MER5B	DNA/hAT-Charlie	(79)	99	4	3514019
2506	12.4	2.8	3.0	chr6	139049037	139049401	(31756578)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3514020
2942	0.3	0.0	0.0	chr6	141960629	141960931	(28845048)	C	AluY	SINE/Alu	(8)	303	1	3517906
3833	34.7	7.4	7.8	chr6	141960932	141963491	(28842488)	+	PABL_B-int	LTR/ERV1	3251	5808	(1314)	3517904
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
821	30.8	8.5	0.8	chr6	143953573	143953971	(26852008)	+	HAL1	LINE/L1	8	440	(2067)	3520619
2320	11.9	0.0	0.0	chr6	145393820	145394122	(25411857)	C	AluSc8	SINE/Alu	(8)	303	1	3522726
592	25.6	10.0	5.7	chr6	147165131	147165341	(23640638)	C	MER115	DNA/hAT-Tip100	(0)	693	473	3525030
1974	18.7	14.1	0.5	chr6	147165420	147165865	(23640114)	+	MER54A	LTR/ERVL	3	519	(382)	3525031
1810	14.8	3.3	0.0	chr6	147579455	147579747	(23226232)	C	AluSx1	SINE/Alu	(0)	312	10	3525589
1905	17.1	2.5	1.7	chr6	150164780	150165131	(20640848)	+	MLT1A0	LTR/ERVL-MaLR	11	365	(0)	3529779
242	19.6	0.0	0.0	chr6	150165514	150165559	(20640420)	C	L2a	LINE/L2	(3)	3423	3378	3529780
424	36.7	7.3	2.7	chr6	150358612	150358932	(20447047)	C	L1ME4a	LINE/L1	(2295)	3851	3511	3530079
266	24.0	0.0	0.0	chr6	150359016	150359065	(20446914)	+	MLT1B	LTR/ERVL-MaLR	123	172	(333)	3530090
649	17.7	2.2	8.4	chr6	150359057	150359198	(20446781)	+	MLT1B	LTR/ERVL-MaLR	258	390	(0)	3530090
981	11.3	0.0	4.2	chr6	150359250	150359391	(20446588)	+	AluJr	SINE/Alu	157	292	(20)	3530091
2013	15.2	1.3	0.3	chr6	151379359	151379667	(19426312)	+	AluJr	SINE/Alu	1	312	(0)	3531886
244	25.9	12.1	7.6	chr6	151379668	151379815	(19426164)	C	L1ME3G	LINE/L1	(864)	5282	5126	3531885
1548	18.3	1.7	3.9	chr6	152263392	152263697	(18542282)	C	AluJr	SINE/Alu	(13)	299	1	3533271
688	27.8	6.0	0.5	chr6	152263708	152263913	(18542066)	+	MIRb	SINE/MIR	38	255	(13)	3533272
2172	12.4	3.2	0.0	chr6	152263935	152264232	(18541747)	+	AluSx	SINE/Alu	1	308	(4)	3533273
1779	4.0	0.0	1.3	chr6	152518927	152519152	(18286827)	+	L1PA4	LINE/L1	5932	6154	(1)	3533634
9076	20.7	5.2	4.0	chr6	152519153	152520327	(18285652)	+	L1MC4a	LINE/L1	6673	7872	(10)	3533632
401	30.3	6.0	3.5	chr6	154569631	154569856	(16236123)	+	MIRc	SINE/MIR	19	253	(15)	3536628
1141	26.6	2.5	0.4	chr6	155798202	155798473	(15007506)	C	LTR41B	LTR/ERVL	(86)	672	395	3538588
1008	28.6	15.7	1.7	chr6	155798649	155798852	(15007127)	C	LTR41B	LTR/ERVL	(339)	419	162	3538588
2605	7.1	0.6	6.1	chr6	155798853	155799228	(15006751)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3538589
233	36.5	1.2	0.0	chr6	156718995	156719079	(14086900)	C	AmnSINE1	SINE/5S-Deu-L2	(28)	547	462	3539888
31	13.6	0.0	0.0	chr6	156719188	156719236	(14086743)	+	(T)n	Simple_repeat	1	49	(0)	3539889
411	19.1	2.2	0.0	chr6	157095127	157095215	(13710764)	C	MER5A	DNA/hAT-Charlie	(78)	111	21	3540417
341	26.6	3.1	0.8	chr6	157095280	157095404	(13710575)	C	MER5B	DNA/hAT-Charlie	(50)	128	1	3540418
22934	8.5	0.9	1.2	chr6	158178478	158184036	(12621943)	C	L1PA7	LINE/L1	(627)	5527	5	3542081
290	33.5	6.3	2.8	chr6	159079978	159080192	(11725787)	+	MIRb	SINE/MIR	46	268	(0)	3543629
357	32.5	3.1	3.1	chr6	159277721	159277847	(11528132)	+	L2b	LINE/L2	3249	3375	(0)	3543888
3329	9.6	1.4	0.0	chr6	159310268	159310706	(11495273)	+	MLT2A2	LTR/ERVL	1	445	(8)	3543929
469	31.7	12.9	4.1	chr6	162499009	162499534	(8306445)	+	L2c	LINE/L2	2808	3387	(0)	3548257
2267	9.8	0.3	4.0	chr6	163289835	163290159	(7515820)	C	AluSp	SINE/Alu	(0)	313	1	3549242
54	0.0	0.0	0.0	chr6	163290279	163290324	(7515655)	+	(CA)n	Simple_repeat	1	46	(0)	3549243
233	34.9	0.0	2.3	chr6	163290325	163290412	(7515567)	C	MamRTE1	LINE/RTE-BovB	(1013)	2799	2714	3549244
426	25.8	5.2	4.1	chr6	163290550	163290719	(7515260)	+	MIRb	SINE/MIR	77	248	(20)	3549245
1196	29.2	11.3	8.1	chr6	163425977	163427403	(7378576)	C	L1MC5a	LINE/L1	(562)	2215	1075	3549434
267	34.0	9.1	1.3	chr6	163519443	163519594	(7286385)	+	MIRb	SINE/MIR	13	177	(91)	3549574
547	27.1	12.0	1.7	chr6	163897508	163897864	(6908115)	C	HAL1	LINE/L1	(0)	2507	2109	3550083
888	22.5	7.9	2.0	chr6	163897896	163898144	(6907835)	+	MLT1C	LTR/ERVL-MaLR	200	464	(3)	3550084
292	27.4	0.0	0.0	chr6	165380545	165380617	(5425362)	C	MIRc	SINE/MIR	(0)	268	196	3551874
1298	22.8	2.8	8.7	chr6	166662720	166663132	(4142847)	+	MLT1B	LTR/ERVL-MaLR	1	388	(2)	3553506
198	29.9	2.5	0.0	chr6	167293987	167294063	(3511916)	+	L2a	LINE/L2	3348	3426	(0)	3554256
1885	14.3	7.6	0.0	chr6	167958011	167958338	(2847641)	+	Tigger4b	DNA/TcMar-Tigger	1	355	(6)	3554988
1810	26.7	8.7	4.2	chr6	168956238	168956984	(1848995)	+	L1MC3	LINE/L1	5456	6239	(1546)	3555997
20526	16.7	2.4	2.6	chr6	169119143	169124344	(1681635)	+	MER52-int	LTR/ERV1	1141	6602	(489)	3556153
14	15.4	5.6	0.0	chr6	169266145	169266180	(1539799)	+	GA-rich	Low_complexity	1	38	(0)	3556285
342	26.2	3.6	4.5	chr6	169905001	169905112	(900867)	+	MIRb	SINE/MIR	70	180	(88)	3556963
2247	19.8	3.0	10.3	chr7	725511	726196	(158619777)	+	LTR8	LTR/ERV1	57	690	(1)	3558808
772	21.9	3.1	0.0	chr7	940176	940330	(158405643)	+	AluJb	SINE/Alu	120	279	(33)	3559087
51	0.0	0.0	0.0	chr7	940331	940374	(158405599)	+	(CA)n	Simple_repeat	1	44	(0)	3559088
1062	19.5	3.3	0.3	chr7	940516	940981	(158404992)	+	L1MD	LINE/L1	3760	4007	(2139)	3559089
1849	22.7	9.6	3.9	chr7	1336299	1336847	(158009126)	C	L1MEc	LINE/L1	(4365)	2035	1456	3559721
2007	15.8	0.0	0.3	chr7	1336848	1337144	(158008829)	+	AluJb	SINE/Alu	1	296	(16)	3559722
182	21.2	19.1	1.4	chr7	1544730	1544821	(157801152)	+	MIR	SINE/MIR	15	125	(83)	3560063
10799	12.7	1.7	8.1	chr7	3250745	3251410	(156094563)	+	Tigger1	DNA/TcMar-Tigger	227	880	(1538)	3562982
112	24.9	0.7	1.7	chr7	4083573	4083862	(155262111)	+	(CCTC)n	Simple_repeat	1	292	(0)	3564226
989	27.9	9.4	14.3	chr7	4083893	4084657	(155261316)	C	L1MC5a	LINE/L1	(691)	2086	1328	3564223
919	17.3	0.7	0.7	chr7	4269536	4269685	(155076288)	C	FRAM	SINE/Alu	(6)	170	21	3564481
586	16.2	5.9	0.0	chr7	4269857	4269967	(155076006)	+	MER5B	DNA/hAT-Charlie	48	165	(13)	3564482
1616	14.9	2.7	3.0	chr7	4907814	4908109	(154437864)	C	AluJr	SINE/Alu	(17)	295	1	3565754
2142	10.7	0.7	0.0	chr7	4908143	4908441	(154437532)	C	AluSx	SINE/Alu	(11)	301	1	3565755
2179	9.6	1.3	0.3	chr7	6577829	6578129	(152767844)	C	AluSq	SINE/Alu	(9)	304	1	3569725
1826	18.3	2.6	1.6	chr7	11185252	11185780	(148160193)	C	MER67B	LTR/ERV1	(202)	459	1	3575892
32	15.9	7.6	5.0	chr7	18086835	18086903	(141259070)	+	(CCGCG)n	Simple_repeat	1	71	(0)	3584799
32	0.0	0.0	0.0	chr7	18086904	18086933	(141259040)	+	(GCG)n	Simple_repeat	1	30	(0)	3584800
32	15.9	7.6	5.0	chr7	18086934	18086994	(141258979)	+	(CCGCG)n	Simple_repeat	2	64	(0)	3584801
401	28.8	4.4	3.2	chr7	18481371	18481528	(140864445)	+	LTR103_Mam	LTR/ERV1?	316	475	(0)	3585394
8626	15.9	11.7	1.8	chr7	21329133	21331037	(138014936)	C	MER52D	LTR/ERV1	(0)	2123	4	3589076
1221	27.2	16.0	3.4	chr7	21331038	21331892	(138014081)	+	L1M4a2	LINE/L1	800	1786	(870)	3589075
36933	7.2	2.6	0.2	chr7	21502875	21507687	(137838286)	C	HERVP71A-int	LTR/ERV1	(2002)	5588	661	3589374
2176	11.6	0.3	0.0	chr7	21652856	21653175	(137692798)	C	AluSq	SINE/Alu	(0)	313	1	3589551
20	16.2	2.0	1.9	chr7	21653176	21653190	(137692783)	+	(TTTA)n	Simple_repeat	1	14	(0)	3589552
285	30.4	15.0	2.3	chr7	21985965	21986398	(137359575)	+	L2a	LINE/L2	2466	2964	(455)	3590017
1767	22.3	11.0	1.5	chr7	22092323	22092800	(137253173)	+	L1MCa	LINE/L1	1	529	(5979)	3590194
1844	24.9	4.9	7.3	chr7	22092881	22093486	(137252487)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	37	3590195
280	29.4	8.3	1.6	chr7	25105708	25105897	(134240076)	+	LTR90B	LTR	183	386	(410)	3594927
4362	12.1	0.5	0.5	chr7	26736083	26736716	(132609257)	+	MER41B	LTR/ERV1	1	634	(0)	3597470
658	15.2	0.0	2.9	chr7	26736813	26736917	(132609056)	+	FRAM	SINE/Alu	65	166	(10)	3597471
17	3.5	0.0	8.6	chr7	29605124	29605158	(129740815)	+	(ATCTTT)n	Simple_repeat	1	35	(0)	3601844
44060	18.4	0.6	0.2	chr7	29636925	29644127	(129701846)	C	HERVS71-int	LTR/ERV1	(44)	8934	1705	3601907
2333	10.4	0.0	0.0	chr7	30462667	30462965	(128883008)	+	AluSz	SINE/Alu	1	299	(13)	3603159
958	23.9	5.7	13.4	chr7	30462966	30463274	(128882699)	+	L1ME1	LINE/L1	5912	6172	(7)	3603157
533	25.2	11.6	1.4	chr7	30463274	30463490	(128882483)	+	L1MEg	LINE/L1	1388	1629	(4455)	3603160
5506	11.7	8.2	6.2	chr7	30506605	30507882	(128838091)	C	LTR12D	LTR/ERV1	(12)	1567	366	3603224
274	2.9	0.0	0.0	chr7	30507859	30507892	(128838081)	C	Alu	SINE/Alu	(99)	34	1	3603225
1686	24.9	5.5	3.4	chr7	30507939	30508285	(128837688)	+	L1MC5a	LINE/L1	2023	2365	(412)	3603226
2043	12.5	0.7	0.0	chr7	30508286	30508564	(128837409)	+	AluSc	SINE/Alu	1	281	(28)	3603227
489	23.1	2.8	0.0	chr7	30619098	30619201	(128726772)	C	MIR	SINE/MIR	(154)	108	2	3603395
9715	4.1	0.8	16.8	chr7	32753149	32754796	(126591177)	+	SVA_B	Retroposon/SVA	1	1383	(0)	3606721
1150	27.1	15.0	3.4	chr7	33782662	33783222	(125562751)	+	MLT2F	LTR/ERVL	26	663	(0)	3608383
8686	16.0	2.1	0.6	chr7	34395135	34396508	(124949465)	C	ERV24_Prim-int	LTR/ERV1	(59)	7516	6115	3609221
369	26.1	6.5	2.2	chr7	34641564	34641716	(124704257)	+	MIRb	SINE/MIR	86	254	(8)	3609525
251	39.7	2.5	4.4	chr7	34642122	34642324	(124703649)	C	L2	LINE/L2	(659)	2760	2562	3609526
766	29.0	6.0	5.0	chr7	36070764	36071159	(123274814)	+	MamGypLTR3	LTR/Gypsy	429	828	(66)	3611688
26224	13.9	2.8	0.7	chr7	41553289	41558903	(117787070)	C	PRIMA41-int	LTR/ERV1	(1997)	5759	5	3620011
17102	13.5	0.8	1.7	chr7	52335370	52338671	(107007302)	C	HERVH-int	LTR/ERV1	(4126)	3587	1	3634769
3910	19.6	5.9	2.7	chr7	54329995	54330847	(105015126)	C	MER21C	LTR/ERVL	(41)	897	16	3637239
2105	12.5	0.0	0.3	chr7	55785029	55785323	(103560650)	C	AluSz6	SINE/Alu	(4)	308	15	3639204
296	27.4	4.6	1.6	chr7	55785511	55785636	(103560337)	+	LTR88a	LTR/Gypsy?	250	379	(437)	3639205
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
2065	13.9	0.3	1.6	chr7	66601793	66601929	(92744044)	C	AluSz6	SINE/Alu	(179)	133	1	3650368
270	31.4	5.6	0.0	chr7	66602117	66602234	(92743739)	+	LTR88a	LTR/Gypsy?	255	379	(437)	3650370
820	32.8	0.8	1.6	chr7	67489674	67489921	(91856052)	C	MIRb	SINE/MIR	(9)	259	14	3652358
461	36.5	2.6	0.8	chr7	68993544	68993808	(90352165)	C	L4_A_Mam	LINE/RTE-X	(98)	4892	4623	3655690
6973	12.2	5.9	5.4	chr7	69590929	69592200	(89753773)	C	MER52C	LTR/ERV1	(0)	1278	1	3657051
507	21.4	2.6	19.9	chr7	69592201	69592286	(89753687)	+	L1ME3C	LINE/L1	6085	6165	(77)	3657049
492	29.1	16.2	7.3	chr7	71965331	71965568	(87380405)	+	L4_A_Mam	LINE/RTE-X	3537	3757	(1233)	3661319
30	0.0	0.0	0.0	chr7	71965569	71965596	(87380377)	+	(AACA)n	Simple_repeat	1	28	(0)	3661336
492	29.1	16.2	7.3	chr7	71965597	71965799	(87380174)	+	L4_A_Mam	LINE/RTE-X	3758	4017	(973)	3661319
413	31.9	2.9	0.6	chr7	71965935	71966101	(87379872)	+	L4_A_Mam	LINE/RTE-X	4221	4391	(599)	3661319
1436	21.1	7.0	4.9	chr7	72920654	72920867	(86425106)	C	L1MEc	LINE/L1	(5625)	775	555	3663359
2194	9.1	0.6	3.4	chr7	72920896	72921215	(86424758)	+	AluSq	SINE/Alu	1	311	(2)	3663362
534	16.4	0.9	1.9	chr7	72921220	72921325	(86424648)	C	MLT2B4	LTR/ERVL	(450)	106	2	3663363
2316	11.2	0.0	0.0	chr7	73972260	73972564	(85373409)	+	AluSg	SINE/Alu	1	305	(5)	3665905
376	30.1	4.1	1.6	chr7	73972846	73972990	(85372983)	+	MIRc	SINE/MIR	35	185	(83)	3665906
1918	15.3	1.3	0.3	chr7	74419345	74419644	(84926329)	C	AluJb	SINE/Alu	(1)	311	9	3667034
21	4.1	0.0	0.0	chr7	74419869	74419893	(84926080)	+	(T)n	Simple_repeat	1	25	(0)	3667035
2430	10.4	0.0	0.3	chr7	74693565	74693862	(84652111)	+	AluSc	SINE/Alu	1	297	(12)	3667782
7301	13.2	4.9	8.5	chr7	74693863	74694305	(84651668)	+	Tigger1	DNA/TcMar-Tigger	409	855	(1563)	3667780
1729	19.8	1.0	1.6	chr7	75561633	75561946	(83784027)	C	AluJr	SINE/Alu	(0)	312	1	3669916
1101	15.0	0.6	0.0	chr7	75562292	75562451	(83783522)	C	AluJo	SINE/Alu	(14)	298	138	3669917
329	25.7	7.6	0.9	chr7	80899723	80899832	(78446141)	C	MER102a	DNA/hAT-Charlie	(167)	163	46	3678777
611	20.2	0.0	0.0	chr7	80899954	80900062	(78445911)	C	L1PB4	LINE/L1	(14)	6142	6034	3678778
2455	8.2	0.0	0.0	chr7	80900116	80900408	(78445565)	C	AluY	SINE/Alu	(14)	297	5	3678779
267	35.0	3.7	1.9	chr7	80958501	80958605	(78387368)	C	MIRb	SINE/MIR	(136)	132	26	3678865
2696	5.2	0.0	0.0	chr7	80958901	80959208	(78386765)	C	AluYm1	SINE/Alu	(3)	308	1	3678866
404	27.7	6.2	2.5	chr7	81383123	81383452	(77962521)	C	L1ME4a	LINE/L1	(90)	6034	5682	3679451
1072	15.7	0.0	1.7	chr7	81383487	81383658	(77962315)	C	AluJb	SINE/Alu	(14)	298	130	3679452
18	30.7	0.0	0.0	chr7	85176748	85176794	(74169179)	+	(AT)n	Simple_repeat	1	47	(0)	3684474
21	0.0	0.0	0.0	chr7	85176794	85176816	(74169157)	+	(AG)n	Simple_repeat	1	23	(0)	3684475
16	0.0	0.0	0.0	chr7	85220331	85220347	(74125626)	+	(T)n	Simple_repeat	1	17	(0)	3684535
4342	20.4	4.9	1.4	chr7	90191594	90192484	(69153489)	C	HERV4_I-int	LTR/ERV1	(3674)	2865	2009	3690739
2608	4.9	3.4	0.0	chr7	97861024	97861311	(61484662)	C	AluY	SINE/Alu	(13)	298	1	3701387
4643	17.2	2.7	5.9	chr7	97861312	97862047	(61483926)	C	L1M4	LINE/L1	(1144)	5002	4281	3701386
1804	15.0	0.7	6.1	chr7	98356695	98357020	(60988953)	+	AluJo	SINE/Alu	1	308	(4)	3702394
35	0.0	0.0	0.0	chr7	98357021	98357050	(60988923)	+	(AT)n	Simple_repeat	1	30	(0)	3702395
1647	13.6	0.0	10.9	chr7	98357051	98357175	(60988798)	C	AluJo	SINE/Alu	(179)	133	12	3702393
325	31.2	4.6	0.8	chr7	100444415	100444540	(58901433)	+	MIR	SINE/MIR	44	174	(88)	3706592
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
1863	15.8	0.3	4.2	chr7	107870674	107870984	(51474989)	+	AluJo	SINE/Alu	2	300	(12)	3719751
590	25.0	19.2	0.6	chr7	107871029	107871197	(51474776)	+	LTR16A	LTR/ERVL	1	208	(243)	3719752
3181	24.4	5.2	3.2	chr7	112889627	112890444	(46455529)	+	L1M4a1	LINE/L1	40	874	(1705)	3726424
656	17.4	4.2	3.5	chr7	112890495	112890637	(46455336)	+	L1M4a1	LINE/L1	964	1107	(1472)	3726424
37	20.6	1.3	0.0	chr7	114114227	114114302	(45231671)	+	(AT)n	Simple_repeat	1	77	(0)	3727960
348	33.6	10.1	2.6	chr7	114114303	114114531	(45231442)	C	L4_B_Mam	LINE/RTE-X	(294)	4647	4400	3727961
2488	5.9	1.0	0.7	chr7	114462000	114462302	(44883671)	+	AluSc	SINE/Alu	2	305	(4)	3728429
1356	29.3	8.0	1.0	chr7	116141590	116142089	(43203884)	C	MER90a	LTR/ERV1	(0)	614	77	3730647
4386	28.1	9.2	6.5	chr7	119040631	119042313	(40303660)	+	MSTC-int	LTR/ERVL-MaLR	2	1735	(0)	3734699
1815	17.9	7.5	6.8	chr7	119042314	119042459	(40303514)	+	MSTC	LTR/ERVL-MaLR	1	158	(270)	3734699
606	8.2	0.0	0.0	chr7	119042460	119042544	(40303429)	+	L1PA8	LINE/L1	6081	6165	(7)	3734700
1815	17.9	7.5	6.8	chr7	119042545	119042822	(40303151)	+	MSTC	LTR/ERVL-MaLR	159	428	(0)	3734699
6528	9.2	16.2	0.8	chr7	120109697	120110763	(39235210)	+	MER11A	LTR/ERVK	2	1265	(1)	3735951
317	9.5	3.1	0.0	chr7	120110818	120110880	(39235093)	+	L1M1	LINE/L1	2801	2865	(3281)	3735952
2096	17.4	1.6	0.0	chr7	120110898	120111264	(39234709)	C	L1PB4	LINE/L1	(3)	6153	5781	3735953
371	38.9	6.7	0.8	chr7	121009171	121009321	(38336652)	C	L2	LINE/L2	(2191)	1228	1067	3737102
1933	17.0	0.0	1.0	chr7	121009322	121009627	(38336346)	+	AluJb	SINE/Alu	1	303	(9)	3737103
371	38.9	6.7	0.8	chr7	121009628	121009843	(38336130)	C	L2	LINE/L2	(2353)	1066	839	3737102
14	15.8	2.7	2.6	chr7	121401234	121401270	(37944703)	+	A-rich	Low_complexity	1	38	(0)	3737612
11519	21.6	2.5	3.6	chr7	121507931	121510966	(37835007)	C	HERVIP10B3-int	LTR/ERV1	(2051)	5552	26	3737792
2803	20.9	10.1	8.3	chr7	123735328	123736523	(35609450)	+	L1MEc	LINE/L1	789	2008	(4392)	3740884
2086	12.2	0.3	3.6	chr7	128399395	128399698	(30946275)	+	AluSz6	SINE/Alu	1	294	(18)	3747147
297	24.0	15.4	3.8	chr7	128399745	128399904	(30946069)	+	MER103C	DNA/hAT-Charlie	116	297	(0)	3747148
2196	11.0	0.3	3.8	chr7	129537975	129538118	(29807855)	+	AluSz6	SINE/Alu	1	134	(178)	3749345
469	34.7	7.9	3.6	chr7	130689371	130689597	(28656376)	C	L2c	LINE/L2	(1061)	2358	2134	3751480
744	28.8	7.5	6.5	chr7	130689743	130690139	(28655834)	+	L1M6	LINE/L1	162	562	(5934)	3751484
310	39.5	5.4	6.8	chr7	133839826	133840105	(25505868)	C	L2b	LINE/L2	(0)	3375	3100	3756555
297	33.5	7.2	5.8	chr7	134841895	134842171	(24503802)	+	L2a	LINE/L2	3056	3341	(34)	3758116
607	28.6	9.6	1.4	chr7	134842211	134842430	(24503543)	+	MIRb	SINE/MIR	29	268	(0)	3758117
2589	33.8	7.3	6.6	chr7	135322486	135325143	(24020830)	C	PABL_B-int	LTR/ERV1	(3835)	4012	1139	3758750
195	20.9	20.2	1.1	chr7	135443369	135443460	(23902513)	C	MIRc	SINE/MIR	(47)	221	108	3758935
194	30.2	7.4	0.0	chr7	135443447	135443509	(23902464)	C	MIRb	SINE/MIR	(179)	89	22	3758936
1756	17.3	3.5	0.7	chr7	135443867	135444144	(23901829)	+	AluJb	SINE/Alu	1	286	(26)	3758937
387	28.3	7.4	6.0	chr7	135744689	135744887	(23601086)	+	MIRb	SINE/MIR	24	225	(43)	3759514
608	23.1	0.0	0.0	chr7	135744902	135745018	(23600955)	C	AluJb	SINE/Alu	(19)	293	177	3759515
467	21.0	3.6	0.0	chr7	135745023	135745103	(23600870)	C	AluJb	SINE/Alu	(98)	204	121	3759515
2415	10.6	1.0	0.7	chr7	137775855	137776156	(21569817)	C	AluSp	SINE/Alu	(9)	304	2	3762386
675	26.8	6.9	5.3	chr7	137776157	137776193	(21569780)	+	L1ME3G	LINE/L1	603	638	(286)	3762385
2141	12.2	0.3	0.3	chr7	138688276	138688569	(20657404)	C	AluSq	SINE/Alu	(19)	294	1	3764088
906	22.0	4.2	3.9	chr7	138688570	138688811	(20657162)	+	L1MB7	LINE/L1	5468	5667	(507)	3764086
778	14.1	0.0	0.8	chr7	138688817	138688938	(20657035)	+	MLT1C	LTR/ERVL-MaLR	3	123	(344)	3764089
372	23.2	15.8	0.9	chr7	138852861	138852973	(20493000)	+	MLT1O	LTR/ERVL-MaLR	410	542	(0)	3764444
2326	10.3	0.0	0.0	chr7	139120800	139121090	(20224883)	+	AluSg	SINE/Alu	1	291	(19)	3764963
1149	18.2	0.0	0.0	chr7	139121095	139121275	(20224698)	C	FAM	SINE/Alu	(4)	181	1	3764964
1769	17.4	1.7	0.7	chr7	139121422	139121709	(20224264)	C	AluJo	SINE/Alu	(21)	291	1	3764965
18660	19.4	0.9	3.0	chr7	140657985	140659540	(18686433)	+	HERV3-int	LTR/ERV1	2039	3575	(4851)	3767976
232	24.6	4.2	1.4	chr7	140910477	140910546	(18435427)	C	Charlie15a	DNA/hAT-Charlie	(41)	183	112	3768412
1801	13.4	4.5	1.8	chr7	140910682	140910964	(18435009)	C	AluJr	SINE/Alu	(21)	291	1	3768413
211	13.3	0.0	0.0	chr7	144454218	144454247	(14891726)	+	MIRc	SINE/MIR	86	115	(153)	3773234
18	20.6	0.0	2.4	chr7	144454334	144454374	(14891599)	+	(AT)n	Simple_repeat	1	41	(0)	3773235
654	24.7	11.9	3.0	chr7	147079109	147079344	(12266629)	C	MIR	SINE/MIR	(4)	258	13	3776789
1007	5.6	0.0	0.0	chr7	147079465	147079589	(12266384)	+	L1PA4	LINE/L1	6013	6137	(18)	3776790
12	9.9	2.6	7.7	chr7	148423573	148423610	(10922363)	+	A-rich	Low_complexity	1	39	(0)	3778734
256	28.8	10.0	6.1	chr7	148423672	148423834	(10922139)	+	CR1_Mam	LINE/CR1	2011	2180	(24)	3778735
16	5.2	0.0	0.0	chr7	148423898	148423917	(10922056)	+	(TA)n	Simple_repeat	1	20	(0)	3778736
14	10.0	6.2	0.0	chr7	149035387	149035419	(10310554)	+	A-rich	Low_complexity	1	35	(0)	3779868
2287	9.8	0.0	0.6	chr7	149035566	149035880	(10310093)	+	AluSq2	SINE/Alu	1	313	(0)	3779869
2128	12.8	0.3	1.6	chr7	149233486	149233791	(10112182)	+	AluSz	SINE/Alu	1	302	(10)	3780344
872	18.6	0.6	4.1	chr7	149437107	149437278	(9908695)	C	FRAM	SINE/Alu	(10)	166	1	3780697
2062	7.7	5.9	0.4	chr7	150354758	150355030	(8990943)	+	AluSx3	SINE/Alu	1	289	(22)	3781930
1587	16.6	8.3	5.0	chr7	150355031	150355224	(8990749)	+	AluJb	SINE/Alu	130	312	(0)	3781929
2342	13.9	1.3	1.5	chr7	150355229	150355622	(8990351)	C	MER57B2	LTR/ERV1	(4)	399	7	3781931
968	27.4	2.0	0.8	chr7	150932034	150932280	(8413693)	C	MLT1J	LTR/ERVL-MaLR	(251)	261	12	3782670
2196	12.2	0.3	0.0	chr7	150932412	150932706	(8413267)	+	AluSx1	SINE/Alu	1	296	(16)	3782671
1631	21.1	17.6	3.6	chr7	151462154	151462683	(7883290)	+	L1M4	LINE/L1	62	681	(6836)	3783486
2660	16.1	8.5	1.1	chr7	151462701	151463208	(7882765)	+	L1M4	LINE/L1	1866	2418	(5099)	3783486
2034	14.8	9.4	3.9	chr7	151942336	151942421	(7403552)	C	LTR47B4	LTR/ERVL	(339)	95	1	3784290
291	31.3	2.2	4.4	chr7	151942422	151942517	(7403456)	+	HAL1	LINE/L1	1671	1766	(741)	3784289
23	10.0	0.0	0.0	chr7	151942520	151942552	(7403421)	+	(CA)n	Simple_repeat	1	33	(0)	3784292
2140	11.8	1.4	0.0	chr7	151942789	151943076	(7402897)	C	AluSg	SINE/Alu	(18)	292	1	3784293
35319	18.8	4.1	4.9	chr7	154925107	154928743	(4417230)	C	ERV24B_Prim-int	LTR/ERV1	(1815)	3679	23	3788913
275	34.3	3.4	0.7	chr7	156384888	156385031	(2960942)	+	L2b	LINE/L2	3227	3374	(1)	3790835
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
1058	28.1	8.1	1.1	chr7	158603189	158603569	(742404)	+	L1ME2	LINE/L1	5739	6148	(16)	3793425
12080	13.7	4.3	0.8	chr7	158775027	158776855	(569118)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	488	3793682
238	32.6	1.1	6.3	chr7	158875393	158875416	(470557)	+	L2a	LINE/L2	3400	3423	(3)	3793832
2297	13.5	10.3	0.5	chr7	158876011	158876396	(469577)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3793834
14	25.3	0.0	0.0	chr8	1834893	1834934	(143303702)	+	(CACCCGG)n	Simple_repeat	1	42	(0)	3796161
1356	26.7	5.0	4.1	chr8	1841261	1841698	(143296938)	C	LTR56	LTR/ERV1	(3)	442	1	3796165
1174	19.9	10.6	0.0	chr8	6120465	6120760	(139017876)	+	MER44A	DNA/TcMar-Tigger	1	331	(8)	3801519
180	26.6	11.1	8.6	chr8	6120912	6121051	(139017585)	C	MIR1_Amn	SINE/MIR	(29)	201	58	3801520
2263	11.1	0.0	0.7	chr8	10703721	10704026	(134434610)	+	AluSx	SINE/Alu	1	304	(8)	3808507
3396	29.8	8.5	3.5	chr8	10704027	10704557	(134434079)	+	BLACKJACK	DNA/hAT-Blackjack	995	1561	(1408)	3808506
3044	5.3	0.8	0.0	chr8	12958730	12959105	(132179531)	+	L1PA6	LINE/L1	5776	6154	(0)	3811892
1200	17.7	4.2	0.9	chr8	12959194	12959421	(132179215)	+	Tigger4b	DNA/TcMar-Tigger	5	240	(121)	3811893
251	10.7	23.3	0.0	chr8	12959416	12959471	(132179165)	+	Tigger4b	DNA/TcMar-Tigger	267	339	(22)	3811894
241	23.0	20.8	2.3	chr8	17201322	17201450	(127937186)	C	L1MC	LINE/L1	(1996)	5886	5728	3817862
1953	9.9	3.6	4.9	chr8	17201482	17201795	(127936841)	C	AluY	SINE/Alu	(0)	311	1	3817863
1895	17.2	1.3	0.3	chr8	17456636	17456932	(127681704)	C	AluJb	SINE/Alu	(12)	300	1	3818220
253	32.9	6.4	4.6	chr8	17522599	17522751	(127615885)	+	MLT1J	LTR/ERVL-MaLR	65	220	(292)	3818324
1816	17.4	0.7	0.3	chr8	17522754	17523046	(127615590)	+	AluJo	SINE/Alu	1	294	(18)	3818325
757	9.9	3.5	0.0	chr8	17523050	17523160	(127615476)	+	L1PA8	LINE/L1	6053	6167	(5)	3818326
2564	8.6	0.0	1.9	chr8	17751578	17751890	(127386746)	+	AluSc	SINE/Alu	1	307	(2)	3818665
1266	17.2	3.7	0.5	chr8	18043310	18043519	(127095117)	C	AluJb	SINE/Alu	(95)	217	1	3819103
2219	24.2	6.2	10.0	chr8	18043520	18044048	(127094588)	C	L1MEc	LINE/L1	(1144)	5175	4614	3819102
988	26.5	6.8	2.7	chr8	19857351	19857718	(125280918)	+	MER89	LTR/ERV1	176	559	(0)	3821892
2992	24.2	7.9	2.5	chr8	19857726	19858596	(125280040)	C	LTR27E	LTR/ERV1	(0)	1077	117	3821893
186	36.5	11.0	8.7	chr8	21796863	21797093	(123341543)	C	MIRc	SINE/MIR	(0)	268	32	3825020
790	14.0	1.4	2.2	chr8	21797279	21797417	(123341219)	C	AluJb	SINE/Alu	(0)	312	175	3825021
335	16.7	0.0	0.0	chr8	21797418	21797465	(123341171)	+	AluJo	SINE/Alu	113	160	(152)	3825022
3255	13.0	4.0	4.3	chr8	25394867	25395396	(119743240)	C	MER1A	DNA/hAT-Charlie	(1)	528	1	3831038
11	34.7	0.0	0.0	chr8	25875269	25875322	(119263314)	+	(TTTATA)n	Simple_repeat	1	54	(0)	3831763
1050	30.6	7.2	5.5	chr8	29156849	29157276	(115981360)	+	L2a	LINE/L2	2398	2825	(594)	3837433
1504	19.3	11.1	0.0	chr8	29157277	29157420	(115981216)	+	AluJo	SINE/Alu	5	148	(164)	3837434
2369	12.3	0.0	0.7	chr8	29157421	29157730	(115980906)	+	AluSz	SINE/Alu	1	308	(4)	3837435
13	10.0	5.9	2.8	chr8	30606968	30607001	(114531635)	+	(TTATAA)n	Simple_repeat	1	36	(0)	3840030
270	10.6	7.8	0.0	chr8	30607278	30607324	(114531312)	+	Looper	DNA/PiggyBac	11	61	(1496)	3840031
296	28.7	5.4	9.8	chr8	35706729	35706902	(109431734)	+	MER5A	DNA/hAT-Charlie	2	167	(22)	3847941
194	33.8	5.1	0.0	chr8	35706971	35707044	(109431592)	+	MamTip2	DNA/hAT-Tip100	18	95	(210)	3847942
192	30.1	7.9	3.1	chr8	35707059	35707154	(109431482)	+	MamTip2	DNA/hAT-Tip100	154	254	(51)	3847943
974	26.1	4.0	0.4	chr8	37577611	37577849	(107560787)	+	MIR	SINE/MIR	13	260	(2)	3850555
493	25.2	0.0	4.0	chr8	37577851	37577974	(107560662)	+	MIR	SINE/MIR	130	248	(14)	3850549
1911	18.8	8.3	5.2	chr8	38012159	38012361	(107126275)	+	MER4-int	LTR/ERV1	1158	1382	(5216)	3851434
2464	7.4	0.0	1.3	chr8	38012362	38012672	(107125964)	+	AluY	SINE/Alu	1	307	(4)	3851435
1911	18.8	8.3	5.2	chr8	38012673	38012794	(107125842)	+	MER4-int	LTR/ERV1	1383	1505	(5093)	3851434
27	0.0	0.0	0.0	chr8	38012795	38012820	(107125816)	+	(TTTAT)n	Simple_repeat	1	26	(0)	3851436
1911	18.8	8.3	5.2	chr8	38012821	38013026	(107125610)	+	MER4-int	LTR/ERV1	1506	1707	(4891)	3851434
254	24.2	6.1	0.0	chr8	38012994	38013055	(107125581)	+	MER4-int	LTR/ERV1	2577	2642	(3689)	3851434
4437	7.8	1.8	5.1	chr8	38013084	38013774	(107124862)	C	LTR76	LTR/ERV1	(7)	668	1	3851437
197	26.5	1.9	15.0	chr8	38584048	38584167	(106554469)	C	MIR1_Amn	SINE/MIR	(85)	145	42	3852576
917	17.7	0.5	5.4	chr8	38584528	38584600	(106554036)	+	MER53	DNA/hAT	1	74	(119)	3852577
2069	14.5	1.3	0.7	chr8	38584601	38584910	(106553726)	C	AluJo	SINE/Alu	(0)	312	1	3852578
2185	12.5	3.2	1.2	chr8	38978163	38978494	(106160142)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	3853314
2377	8.4	1.0	0.0	chr8	38978715	38979011	(106159625)	+	AluSx1	SINE/Alu	1	300	(12)	3853315
1765	16.3	0.0	2.3	chr8	41775599	41775904	(103362732)	+	AluJr	SINE/Alu	2	300	(12)	3857571
577	22.4	5.3	2.7	chr8	41775905	41776068	(103362568)	C	MIR	SINE/MIR	(18)	244	75	3857570
188	14.0	19.4	2.0	chr8	42269781	42269831	(102868805)	C	MIRb	SINE/MIR	(36)	232	171	3858486
260	27.4	9.4	2.9	chr8	42269973	42270111	(102868525)	C	MIR	SINE/MIR	(107)	161	7	3858487
1312	12.4	16.5	2.6	chr8	42270211	42270444	(102868192)	+	AluJo	SINE/Alu	1	273	(39)	3858488
15	7.5	3.3	3.2	chr8	42541301	42541330	(102597306)	+	(CCG)n	Simple_repeat	1	31	(0)	3858982
269	26.6	2.5	0.0	chr8	47164646	47164724	(97973912)	+	L1M3	LINE/L1	5292	5372	(799)	3861529
3000	1.3	0.0	0.0	chr8	47165112	47165415	(97973221)	C	AluYa5	SINE/Alu	(7)	304	1	3861534
15	25.0	3.1	3.0	chr8	47260886	47260950	(97877686)	+	(GGCGC)n	Simple_repeat	1	67	(0)	3861679
14557	7.1	0.3	1.1	chr8	48239386	48240445	(96898191)	+	HERV9N-int	LTR/ERV1	2366	3424	(1950)	3863126
1981	15.7	0.3	1.6	chr8	51621658	51621962	(93516674)	+	AluJb	SINE/Alu	1	301	(11)	3867018
1134	24.0	14.9	0.9	chr8	51621963	51622431	(93516205)	+	MLT1E2	LTR/ERVL-MaLR	85	654	(0)	3867017
635	13.9	0.0	0.0	chr8	52443412	52443497	(92695139)	+	AluSz	SINE/Alu	14	99	(213)	3868141
2255	10.9	0.3	0.0	chr8	54119156	54119449	(91019187)	C	AluSx1	SINE/Alu	(17)	295	1	3870538
366	20.2	0.0	13.0	chr8	54119450	54119513	(91019123)	C	L1MEc	LINE/L1	(4764)	1651	1593	3870537
487	17.5	3.4	1.7	chr8	54119558	54119673	(91018963)	C	L1MEc	LINE/L1	(4865)	1535	1418	3870537
1248	20.7	4.5	8.5	chr8	54119674	54120063	(91018573)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3870539
1299	17.1	0.8	3.7	chr8	56787751	56788023	(88350613)	+	L1MA10	LINE/L1	6070	6334	(0)	3874438
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
232	29.7	9.8	2.4	chr8	58044710	58044878	(87093758)	C	Helitron2Na_Mam	RC?/Helitron?	(127)	197	15	3876104
597	29.4	1.4	0.9	chr8	58292638	58292850	(86845786)	C	ERV3-16A3_I-int	LTR/ERVL	(2248)	2978	2765	3876385
2754	25.9	5.9	6.8	chr8	58292859	58293969	(86844667)	C	L1M5	LINE/L1	(1263)	4883	3770	3876387
1040	24.9	5.8	5.5	chr8	62619916	62620314	(82518322)	C	MER39	LTR/ERV1	(0)	707	308	3882116
240	26.0	11.0	0.0	chr8	62620328	62620400	(82518236)	C	MER34A	LTR/ERV1	(433)	138	57	3882117
34	0.0	0.0	0.0	chr8	62620409	62620440	(82518196)	+	(ATATGCC)n	Simple_repeat	1	32	(0)	3882118
1631	16.9	1.0	3.9	chr8	67341306	67341612	(77797024)	+	AluJo	SINE/Alu	1	298	(14)	3889096
982	18.5	4.9	1.1	chr8	68645860	68646192	(76492444)	+	MER39	LTR/ERV1	500	706	(1)	3890970
14	25.0	2.0	2.0	chr8	68646273	68646322	(76492314)	+	A-rich	Low_complexity	1	51	(0)	3890971
3367	14.0	2.4	3.5	chr8	68646329	68646965	(76491671)	C	L1MA7	LINE/L1	(6)	6285	5656	3890972
447	35.8	12.8	0.6	chr8	68668287	68668601	(76470035)	+	L3	LINE/CR1	3702	4060	(39)	3891003
1986	21.6	10.9	0.0	chr8	68668662	68669120	(76469516)	+	MLT1E2	LTR/ERVL-MaLR	111	625	(2)	3891004
2073	16.5	0.0	0.3	chr8	70450221	70450548	(74688088)	+	MLT1A0	LTR/ERVL-MaLR	31	357	(8)	3893832
2227	12.7	4.2	0.0	chr8	70450567	70450866	(74687770)	C	AluSq2	SINE/Alu	(0)	313	1	3893833
2318	10.5	0.3	1.0	chr8	70450935	70451238	(74687398)	+	AluY	SINE/Alu	1	302	(9)	3893834
43	2.5	0.0	0.0	chr8	71961060	71961100	(73177536)	+	(GT)n	Simple_repeat	1	41	(0)	3895870
5250	16.3	1.3	0.6	chr8	72824881	72826083	(72312553)	C	L1MB3	LINE/L1	(7)	6176	4963	3896973
1822	4.7	0.4	0.8	chr8	72898222	72898456	(72240180)	+	L1PA4	LINE/L1	5922	6155	(0)	3897050
2294	11.1	8.9	2.5	chr8	72898659	72899056	(72239580)	C	L1PA16	LINE/L1	(1)	6165	5740	3897051
201	23.5	7.5	11.7	chr8	73212419	73212529	(71926107)	+	L2c	LINE/L2	3266	3371	(16)	3897640
2366	10.3	0.0	0.0	chr8	73749201	73749500	(71389136)	+	AluSg	SINE/Alu	1	300	(10)	3898439
361	32.1	11.0	6.3	chr8	73749501	73749731	(71388905)	+	L2c	LINE/L2	3139	3387	(0)	3898438
806	26.4	4.0	1.2	chr8	74029097	74029338	(71109298)	C	MER74B	LTR/ERVL	(0)	622	374	3899032
2618	9.0	1.9	4.4	chr8	74029341	74029652	(71108984)	+	THE1C	LTR/ERVL-MaLR	1	310	(65)	3899033
4239	13.8	0.1	1.0	chr8	75424379	75425053	(69713583)	C	L1PA17	LINE/L1	(3)	6163	5495	3900946
469	32.6	10.2	4.0	chr8	77116315	77116716	(68021920)	C	LTR79	LTR/ERVL	(0)	527	98	3903085
2525	7.4	0.0	0.7	chr8	77935558	77935867	(67202769)	C	AluY	SINE/Alu	(3)	308	1	3904040
805	16.2	0.0	0.0	chr8	80237128	80237244	(64901392)	C	AluJb	SINE/Alu	(195)	117	1	3907304
1767	18.4	0.0	1.6	chr8	80237440	80237744	(64900892)	+	AluJo	SINE/Alu	1	300	(12)	3907305
2205	10.8	0.0	0.0	chr8	80237750	80238044	(64900592)	+	AluSx1	SINE/Alu	5	299	(13)	3907306
2446	8.4	0.3	0.0	chr8	80709163	80709472	(64429164)	+	AluY	SINE/Alu	1	311	(0)	3908257
1523	21.5	9.6	1.6	chr8	80709486	80709924	(64428712)	C	LTR16B1	LTR/ERVL	(2)	478	1	3908258
9953	10.6	0.1	0.7	chr8	85742400	85743923	(59394713)	C	L1P1	LINE/L1	(2125)	4021	2507	3914963
1461	18.5	11.4	9.7	chr8	86059806	86060331	(59078305)	+	LTR49	LTR/ERV1	5	540	(55)	3915421
2003	14.7	0.0	1.7	chr8	86429917	86430216	(58708420)	+	AluJb	SINE/Alu	1	295	(17)	3916074
1693	15.7	4.5	4.2	chr8	86430291	86430576	(58708060)	C	AluJb	SINE/Alu	(25)	287	1	3916075
623	28.7	10.0	7.2	chr8	89717024	89717342	(55421294)	+	L2a	LINE/L2	2406	2734	(685)	3920150
265	28.4	8.9	5.8	chr8	89717520	89717728	(55420908)	C	MLT1H	LTR/ERVL-MaLR	(124)	287	98	3920163
263	34.3	6.9	0.9	chr8	90654254	90654362	(54484274)	C	L2c	LINE/L2	(282)	3105	2990	3921480
932	19.1	2.7	4.2	chr8	90654445	90654635	(54484001)	C	MER5A	DNA/hAT-Charlie	(0)	189	2	3921481
197	14.5	6.1	10.1	chr8	90654853	90654921	(54483715)	C	L2	LINE/L2	(790)	2629	2564	3921482
308	27.1	12.2	4.0	chr8	94226858	94227007	(50911629)	C	MIRb	SINE/MIR	(100)	168	5	3926494
5876	7.0	0.1	0.4	chr8	94324302	94325015	(50813621)	+	L1PA8A	LINE/L1	5420	6131	(0)	3926642
1502	17.4	6.7	2.1	chr8	94576021	94576307	(50562329)	C	AluJr	SINE/Alu	(11)	301	1	3927108
2960	17.5	5.8	6.1	chr8	96383186	96383806	(48754830)	C	MLT1E3	LTR/ERVL-MaLR	(0)	624	6	3930191
529	25.8	2.2	1.5	chr8	97444044	97444177	(47694459)	+	MLT1M	LTR/ERVL-MaLR	92	226	(446)	3931728
433	29.1	6.7	8.9	chr8	101926438	101926670	(43211966)	C	MIRb	SINE/MIR	(6)	256	13	3939521
539	31.7	8.7	7.9	chr8	101927213	101927644	(43210992)	C	L2b	LINE/L2	(2)	3373	2938	3939522
27	13.7	3.5	1.7	chr8	102863614	102863671	(42274965)	+	(CCG)n	Simple_repeat	1	60	(0)	3941253
316	28.9	1.9	8.6	chr8	102895425	102895598	(42243038)	+	MIRb	SINE/MIR	84	245	(23)	3941326
2068	10.8	0.7	1.1	chr8	102895673	102896006	(42242630)	C	AluSz	SINE/Alu	(0)	312	1	3941327
203	30.3	3.3	1.1	chr8	107947436	107947525	(37191111)	+	L3	LINE/CR1	3364	3455	(644)	3948656
2239	6.4	3.3	0.0	chr8	108032813	108033078	(37105558)	+	AluY	SINE/Alu	36	310	(1)	3948775
1853	18.1	0.0	2.2	chr8	108033079	108033200	(37105436)	C	AluJr4	SINE/Alu	(190)	122	1	3948774
269	35.2	7.9	1.1	chr8	108033249	108033426	(37105210)	+	L2	LINE/L2	2580	2770	(649)	3948776
666	19.3	4.1	0.7	chr8	115307185	115307325	(29831311)	+	LTR33C	LTR/ERVL	479	624	(5)	3958518
333	40.9	2.7	1.6	chr8	115307348	115307603	(29831033)	C	L2a	LINE/L2	(337)	3082	2824	3958516
2840	16.7	3.2	0.0	chr8	115307669	115308182	(29830454)	C	L1PA16	LINE/L1	(2)	6164	5634	3958519
881	12.0	0.0	0.0	chr8	116764702	116764818	(28373818)	C	AluJo	SINE/Alu	(195)	117	1	3960553
1502	21.9	5.4	5.0	chr8	119737008	119737472	(25401164)	+	L1MC5	LINE/L1	8795	9261	(43)	3965306
2440	10.4	0.3	0.0	chr8	119737500	119737807	(25400829)	C	AluSz	SINE/Alu	(3)	309	1	3965307
254	31.5	5.9	1.6	chr8	119737837	119737965	(25400671)	+	L1ME4b	LINE/L1	322	456	(436)	3965308
2866	15.2	1.6	3.5	chr8	119760877	119761447	(25377189)	+	Tigger3b	DNA/TcMar-Tigger	732	1228	(3)	3965333
2064	14.2	0.7	0.0	chr8	124367193	124367487	(20771149)	+	AluSx	SINE/Alu	1	297	(15)	3973573
189	36.1	11.9	0.6	chr8	128182890	128183045	(16955591)	+	L2b	LINE/L2	2997	3172	(215)	3980984
317	31.3	11.8	0.7	chr8	128183178	128183328	(16955308)	+	L2b	LINE/L2	3205	3374	(1)	3980984
188	25.9	0.0	10.0	chr8	128183418	128183477	(16955159)	C	L2b	LINE/L2	(0)	3375	3322	3980985
349	37.0	8.0	1.4	chr8	128183450	128183834	(16954802)	+	L2a	LINE/L2	2887	3298	(128)	3980986
263	19.2	15.4	4.5	chr8	130491995	130492104	(14646532)	C	MIRc	SINE/MIR	(139)	123	2	3985173
322	27.2	13.9	1.4	chr8	132062246	132062383	(13076253)	C	MamGypLTR3a	LTR/Gypsy	(818)	163	6	3987844
2637	20.8	4.3	3.4	chr8	132062747	132063338	(13075298)	+	MER77	LTR/ERVL	3	600	(4)	3987845
3737	15.7	4.2	2.4	chr8	133444842	133445590	(11693046)	C	L1MA8	LINE/L1	(2)	6289	5527	3990474
1249	27.5	11.8	6.7	chr8	133445767	133446268	(11692368)	C	MLT1G1	LTR/ERVL-MaLR	(2)	577	1	3990475
392	20.5	1.3	0.0	chr8	137690548	137690625	(7448011)	C	MLT1O	LTR/ERVL-MaLR	(347)	195	117	3997544
67	4.1	10.4	0.0	chr8	137690785	137690909	(7447727)	+	(TA)n	Simple_repeat	1	138	(0)	3997545
15	5.5	0.0	0.0	chr8	138520686	138520704	(6617932)	+	(TG)n	Simple_repeat	1	19	(0)	3998847
351	35.5	0.0	0.0	chr8	139642003	139642109	(5496527)	+	L3	LINE/CR1	3940	4046	(53)	4000654
657	32.2	6.8	3.9	chr8	141943791	141944335	(3194301)	C	L1M5	LINE/L1	(1069)	5077	4516	4004333
433	27.9	2.2	0.7	chr8	142720976	142721112	(2417524)	+	PRIMA41-int	LTR/ERV1	2727	2865	(4891)	4005225
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
2591	4.0	0.0	0.0	chr8	144075230	144075525	(1063111)	C	AluY	SINE/Alu	(15)	296	1	4007070
1928	14.5	1.0	5.0	chr8	144075526	144075669	(1062967)	C	AluJb	SINE/Alu	(179)	133	4	4007069
1038	22.1	11.8	3.9	chr8	144075670	144075919	(1062717)	+	Arthur1	DNA/hAT-Tip100	3616	3897	(50)	4007068
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
38896	12.5	3.5	2.6	chr8	144863370	144865878	(272758)	C	LTR46-int	LTR/ERV1	(2945)	4040	1462	4008220
1437	22.5	3.8	2.7	chr9	3018726	3019091	(135375626)	C	MLT1A	LTR/ERVL-MaLR	(4)	370	1	4013014
275	25.7	6.2	3.7	chr9	3019130	3019238	(135375479)	C	MER94B	DNA/hAT-Blackjack	(6)	127	16	4013015
15	13.9	0.0	0.0	chr9	3019284	3019307	(135375410)	+	(T)n	Simple_repeat	1	24	(0)	4013016
2044	13.2	3.2	0.0	chr9	6681834	6682135	(131712582)	C	AluSz6	SINE/Alu	(0)	312	1	4018486
394	26.7	5.5	5.3	chr9	20192471	20192630	(118202087)	+	MER5A	DNA/hAT-Charlie	24	175	(3)	4037517
760	25.0	0.0	3.3	chr9	20192632	20192813	(118201904)	+	MER5B	DNA/hAT-Charlie	3	178	(0)	4037518
1386	26.2	7.0	2.4	chr9	20280075	20280493	(118114224)	C	LTR16A1	LTR/ERVL	(0)	456	17	4037660
11	20.8	0.0	2.9	chr9	20280583	20280617	(118114100)	+	(GTTTTC)n	Simple_repeat	1	35	(0)	4037661
610	26.5	7.4	3.2	chr9	20280633	20280953	(118113764)	+	MLT1D	LTR/ERVL-MaLR	1	348	(119)	4037662
12	4.8	4.5	0.0	chr9	20468896	20468917	(117925800)	+	(AAAC)n	Simple_repeat	1	23	(0)	4037921
12	11.4	5.2	9.8	chr9	20469015	20469072	(117925645)	+	A-rich	Low_complexity	1	61	(0)	4037922
195	38.2	3.9	2.0	chr9	33114301	33114452	(105280265)	C	L2b	LINE/L2	(305)	3070	2916	4054776
257	29.9	0.0	0.0	chr9	33693674	33693750	(104700967)	C	HERV15-int	LTR/ERV1	(5771)	2964	2888	4055833
611	31.3	8.0	3.2	chr9	34439365	34439874	(103954843)	C	L2c	LINE/L2	(0)	3387	2844	4057440
2699	2.7	0.0	0.3	chr9	34440569	34440868	(103953849)	+	AluY	SINE/Alu	1	299	(12)	4057441
22	11.2	2.6	0.0	chr9	34809992	34810037	(103584680)	+	(CGC)n	Simple_repeat	1	47	(0)	4057978
1653	20.2	5.0	1.3	chr9	40951357	40951784	(97442933)	C	L1MB4	LINE/L1	(63)	6117	5685	4067963
930	25.7	7.4	0.0	chr9	40951786	40952022	(97442695)	+	7SLRNA	srpRNA	3	258	(62)	4067964
2442	9.3	0.0	0.3	chr9	41029821	41030130	(97364587)	C	AluSz	SINE/Alu	(3)	309	1	4068082
641	20.4	0.6	14.4	chr9	41030131	41030184	(97364533)	C	L1ME1	LINE/L1	(42)	6137	6094	4068081
34	0.0	0.0	0.0	chr9	41030185	41030213	(97364504)	+	(AC)n	Simple_repeat	1	29	(0)	4068083
641	20.4	0.6	14.4	chr9	41030214	41030307	(97364410)	C	L1ME1	LINE/L1	(86)	6093	6003	4068081
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
1285	26.9	5.3	5.1	chr9	68464210	68464621	(69930096)	C	LTR16A	LTR/ERVL	(2)	449	37	4079883
448	27.2	7.0	0.0	chr9	70509886	70510043	(67884674)	+	MamRep564	Unknown	69	238	(119)	4083313
721	25.7	5.6	1.9	chr9	70510228	70510433	(67884284)	+	MER102b	DNA/hAT-Charlie	95	308	(33)	4083314
1966	14.9	1.0	0.0	chr9	70510640	70510928	(67883789)	+	AluJo	SINE/Alu	1	292	(20)	4083315
2344	10.3	0.0	2.3	chr9	71750429	71750738	(66643979)	C	AluSp	SINE/Alu	(2)	311	9	4085160
2030	17.7	0.0	0.0	chr9	71750752	71751045	(66643672)	C	AluJo	SINE/Alu	(17)	295	2	4085161
1123	9.0	8.7	1.1	chr9	71751083	71751273	(66643444)	C	L1MB4	LINE/L1	(1)	6179	5973	4085162
716	26.0	17.6	0.3	chr9	77171783	77172083	(61222634)	C	LTR50	LTR/ERVL	(89)	706	343	4093896
437	31.5	5.4	8.2	chr9	77881022	77881363	(60513354)	+	L2a	LINE/L2	3094	3425	(1)	4094921
2007	16.1	0.0	1.8	chr9	77881397	77881682	(60513035)	C	AluJr	SINE/Alu	(30)	282	2	4094922
942	31.8	10.3	1.6	chr9	78612421	78612976	(59781741)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	1	4096030
575	23.8	6.6	6.2	chr9	79093950	79094144	(59300573)	+	L1ME3Cz	LINE/L1	392	593	(404)	4096719
1425	23.0	11.3	1.4	chr9	79094145	79094580	(59300137)	C	MER31A	LTR/ERV1	(0)	485	1	4096720
229	25.7	12.9	0.0	chr9	79310102	79310175	(59084542)	C	MER91B	DNA/hAT-Tip100	(5)	185	101	4097066
13500	3.6	0.4	0.3	chr9	79678622	79681114	(58713603)	C	L1PA4	LINE/L1	(0)	6155	3665	4097588
1659	32.8	6.4	9.6	chr9	81314962	81315617	(57079100)	+	L2a	LINE/L2	1720	2384	(1035)	4099713
2538	12.2	6.3	0.5	chr9	82803351	82803753	(55590964)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4101956
284	23.2	19.6	2.2	chr9	85003299	85003479	(53391238)	C	L2a	LINE/L2	(1)	3425	3206	4105568
1037	32.2	2.0	0.7	chr9	85003493	85003939	(53390778)	C	L2a	LINE/L2	(428)	2991	2539	4105568
1305	28.3	10.4	0.2	chr9	85394487	85394925	(52999792)	+	LTR16C	LTR/ERVL	1	489	(0)	4106142
441	23.4	14.0	2.5	chr9	85949593	85949684	(52445033)	C	HAL1	LINE/L1	(1336)	1171	1070	4107050
754	25.5	0.7	0.0	chr9	85949857	85950037	(52444680)	+	Charlie1	DNA/hAT-Charlie	15	198	(2583)	4107053
70927	5.1	0.5	0.0	chr9	86148447	86156796	(52237921)	C	HERV9-int	LTR/ERV1	(0)	8436	49	4107408
5405	12.1	3.4	1.0	chr9	86768601	86769772	(51624945)	C	L1PB2	LINE/L1	(2)	6149	4949	4108434
1559	23.0	7.1	7.1	chr9	86792574	86793040	(51601677)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	4108472
765	28.4	2.0	1.0	chr9	87330685	87330883	(51063834)	+	MLT1G3-int	LTR/ERVL-MaLR	6	206	(1203)	4109311
1742	27.4	8.6	4.0	chr9	87330902	87331838	(51062879)	+	MLT1G3-int	LTR/ERVL-MaLR	333	1458	(31)	4109311
2086	13.3	11.1	0.0	chr9	87423024	87423375	(50971342)	+	MER57B2	LTR/ERV1	8	403	(0)	4109451
1016	25.6	9.4	1.4	chr9	89478188	89478540	(48916177)	+	MLT1C	LTR/ERVL-MaLR	67	450	(17)	4112540
278	28.8	15.8	3.4	chr9	89989882	89990274	(48404443)	C	MamGypLTR1a	LTR/Gypsy	(38)	746	279	4113247
297	23.2	1.7	0.0	chr9	90951103	90951175	(47443542)	C	L2b	LINE/L2	(0)	3426	3322	4114490
339	29.0	4.0	3.5	chr9	91263650	91263875	(47130842)	C	HAL1ME	LINE/L1	(77)	2430	2156	4114920
15	29.8	4.1	0.0	chr9	91264107	91264155	(47130562)	+	(AT)n	Simple_repeat	1	51	(0)	4114921
343	28.2	8.3	0.0	chr9	91272989	91273098	(47121619)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	443	4114932
18382	25.4	3.9	3.5	chr9	92072527	92078223	(46316494)	+	HERVH-int	LTR/ERV1	596	6213	(1500)	4116167
1806	17.9	2.6	1.0	chr9	92455115	92455415	(45939302)	+	AluJr	SINE/Alu	1	306	(6)	4116765
596	18.4	4.2	17.9	chr9	92455416	92455555	(45939162)	+	MER20	DNA/hAT-Charlie	85	217	(2)	4116764
1972	13.9	0.7	2.3	chr9	93060550	93060858	(45333859)	+	AluJr	SINE/Alu	1	304	(8)	4117639
5089	16.1	2.3	1.3	chr9	93582897	93583815	(44810902)	C	L1MB5	LINE/L1	(0)	6174	5257	4118339
258	19.3	6.3	4.8	chr9	93702592	93702716	(44692001)	+	L1ME4a	LINE/L1	5978	6104	(20)	4118461
2281	12.1	0.0	2.2	chr9	94462210	94462522	(43932195)	C	AluSz	SINE/Alu	(6)	306	1	4119662
291	20.0	4.8	1.6	chr9	94462523	94462583	(43932134)	+	LTR52-int	LTR/ERVL	3178	3240	(316)	4119663
3413	25.4	10.1	3.6	chr9	94462584	94463581	(43931136)	+	L1MDa	LINE/L1	277	1362	(5271)	4119664
1823	33.1	7.5	7.4	chr9	94814204	94816677	(43578040)	C	PRIMA41-int	LTR/ERV1	(3743)	4013	1536	4120325
2441	6.9	0.0	0.0	chr9	95370484	95370773	(43023944)	C	AluSc	SINE/Alu	(19)	290	1	4121118
1726	17.4	0.3	1.4	chr9	95489349	95489635	(42905082)	C	AluJb	SINE/Alu	(12)	300	17	4121280
2208	9.0	3.0	0.0	chr9	97055064	97055351	(41339366)	+	AluSc	SINE/Alu	1	297	(12)	4123933
6998	19.9	7.1	2.9	chr9	97055352	97056879	(41337838)	+	MER21-int	LTR/ERVL	2199	3802	(389)	4123925
1849	13.6	0.4	1.5	chr9	98636466	98636762	(39757955)	C	AluSx3	SINE/Alu	(0)	311	32	4126907
690	30.9	7.7	5.0	chr9	99645307	99645746	(38748971)	+	L1M6	LINE/L1	1	453	(6043)	4128865
1042	10.3	0.0	0.7	chr9	99645798	99645933	(38748784)	+	AluSz	SINE/Alu	1	135	(177)	4128866
2439	6.7	0.7	0.7	chr9	99645934	99646230	(38748487)	+	AluSc8	SINE/Alu	1	297	(14)	4128867
7074	17.4	6.3	3.5	chr9	99907662	99909282	(38485435)	C	L1MC4a	LINE/L1	(9)	7873	6204	4129283
235	28.9	0.0	2.6	chr9	117240484	117240561	(21154156)	C	L2b	LINE/L2	(383)	2992	2917	4159049
216	26.4	16.5	0.0	chr9	117240749	117240839	(21153878)	C	MIR3	SINE/MIR	(54)	154	46	4159055
8794	20.6	4.3	5.3	chr9	121790453	121794367	(16600350)	+	HERVH-int	LTR/ERV1	1	3993	(3720)	4167709
2114	10.1	0.0	10.4	chr9	123464867	123465213	(14929504)	+	AluSx	SINE/Alu	1	311	(1)	4170744
24	12.0	0.0	0.0	chr9	123465296	123465331	(14929386)	+	(T)n	Simple_repeat	1	36	(0)	4170745
457	24.3	16.0	1.1	chr9	123465388	123465562	(14929155)	+	MIRc	SINE/MIR	2	207	(61)	4170746
1020	26.2	11.4	9.7	chr9	123651179	123651952	(14742765)	+	L1ME4c	LINE/L1	14	802	(28)	4171082
349	30.8	1.9	1.1	chr9	124024228	124024393	(14370324)	C	MIR3	SINE/MIR	(53)	215	40	4171725
379	32.7	7.2	0.5	chr9	124024426	124024631	(14370086)	+	MIRb	SINE/MIR	5	225	(43)	4171726
2266	18.1	1.1	8.4	chr9	130389220	130389575	(8005142)	C	L1MB8	LINE/L1	(5)	6173	5823	4184925
2409	8.7	0.0	0.0	chr9	130389576	130389874	(8004843)	C	AluSx	SINE/Alu	(13)	299	1	4184926
1931	15.1	0.0	2.6	chr9	132222824	132223127	(6171590)	+	AluJb	SINE/Alu	1	296	(16)	4188469
4235	15.9	6.1	1.5	chr9	132559374	132560188	(5834529)	+	L1MB7	LINE/L1	5327	6182	(2)	4189140
1266	28.1	23.7	6.2	chr9	133021250	133021603	(5373114)	C	Arthur1B	DNA/hAT-Tip100	(626)	599	186	4189935
2325	10.5	0.0	0.6	chr9	133021604	133021916	(5372801)	+	AluSx1	SINE/Alu	1	311	(1)	4189936
767	34.1	6.7	7.2	chr9	135731357	135731991	(2662726)	C	HAL1b	LINE/L1	(574)	1847	1243	4193577
790	15.3	0.8	0.8	chr9	136119977	136120100	(2274617)	+	AluJr4	SINE/Alu	9	132	(180)	4194049
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
1044	23.1	4.3	9.1	chrX	3159337	3159601	(152881294)	+	MER39	LTR/ERV1	150	530	(177)	4364369
1752	15.7	0.4	2.1	chrX	3159602	3159888	(152881007)	+	AluSx	SINE/Alu	1	282	(30)	4364372
1044	25.2	5.5	7.5	chrX	3159889	3160070	(152880825)	+	MER39	LTR/ERV1	531	707	(0)	4364369
430	33.7	9.3	3.9	chrX	9558798	9559313	(146481582)	+	L4_A_Mam	LINE/RTE-X	4403	4949	(41)	4375001
1036	24.2	1.7	5.2	chrX	10466884	10467249	(145573646)	+	L1ME4b	LINE/L1	309	661	(231)	4376529
2458	18.4	0.7	0.9	chrX	13436892	13437336	(142603559)	+	L1PB4	LINE/L1	5712	6155	(1)	4381171
14023	13.9	2.5	0.4	chrX	14234815	14237124	(141803771)	+	L1M4c	LINE/L1	13	2371	(4013)	4382450
227	21.2	3.6	9.1	chrX	14551314	14551401	(141489494)	+	L2c	LINE/L2	3305	3387	(0)	4382890
190	22.6	3.6	3.6	chrX	15791277	15791331	(140249564)	+	MIRb	SINE/MIR	200	254	(14)	4384973
1318	23.4	16.2	1.4	chrX	17340096	17340511	(138700384)	C	LTR16C	LTR/ERVL	(0)	489	1	4387691
573	9.5	0.0	0.0	chrX	19880461	19880544	(136160351)	+	L1MA1	LINE/L1	6219	6302	(0)	4392135
2260	19.1	6.9	0.4	chrX	19880615	19881086	(136159809)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	4392136
352	28.8	16.1	2.2	chrX	21194247	21194427	(134846468)	C	MamGypLTR2b	LTR/Gypsy	(16)	1052	752	4394193
2246	21.9	5.7	1.0	chrX	29857604	29858119	(126182776)	C	MER34	LTR/ERV1	(0)	542	1	4407403
2792	13.9	2.3	0.9	chrX	35372208	35372709	(120668186)	C	L1MA2	LINE/L1	(209)	6095	5593	4414988
309	25.2	9.3	5.3	chrX	35372993	35373059	(120667836)	C	MER5B	DNA/hAT-Charlie	(2)	176	104	4414990
2361	26.7	3.1	0.9	chrX	35373060	35373698	(120667197)	+	MLT1E	LTR/ERVL-MaLR	1	653	(0)	4414991
682	33.0	9.6	2.0	chrX	37076392	37076947	(118963948)	+	L2	LINE/L2	2203	2805	(614)	4417185
747	34.5	5.2	2.5	chrX	38336011	38336441	(117704454)	C	LTR33	LTR/ERVL	(2)	513	71	4418795
20	11.3	0.0	0.0	chrX	38336507	38336546	(117704349)	+	(A)n	Simple_repeat	1	40	(0)	4418796
1077	20.7	7.1	0.9	chrX	41170907	41171130	(114869765)	C	MER8	DNA/TcMar-Tigger	(0)	239	1	4423794
1027	17.1	0.0	1.2	chrX	41171188	41171351	(114869544)	+	AluJo	SINE/Alu	137	298	(14)	4423795
288	34.0	8.1	1.0	chrX	42525803	42526007	(113514888)	C	L1M5	LINE/L1	(1349)	4797	4577	4426102
419	27.9	5.5	0.0	chrX	42526007	42526228	(113514667)	C	L1M5	LINE/L1	(1688)	4458	4224	4426102
2440	23.2	2.4	7.5	chrX	42953668	42954328	(113086567)	C	MER34-int	LTR/ERV1	(6931)	1276	641	4426670
823	21.3	8.5	9.2	chrX	42954341	42954733	(113086162)	+	ERVL-int	LTR/ERVL	5367	5756	(1)	4426672
2243	12.7	0.3	0.0	chrX	44319003	44319301	(111721594)	C	AluSq2	SINE/Alu	(12)	301	2	4428635
1948	12.9	1.7	0.7	chrX	44599245	44599530	(111441365)	C	AluJb	SINE/Alu	(13)	299	11	4429249
561	29.5	13.2	6.2	chrX	44599531	44599957	(111440938)	C	L1ME3Cz	LINE/L1	(996)	5150	4672	4429245
4944	19.0	5.0	8.6	chrX	45272414	45273336	(110767559)	+	MER92-int	LTR/ERV1	1919	2807	(2411)	4430582
3798	13.4	11.0	0.6	chrX	45273337	45273965	(110766930)	C	MER39	LTR/ERV1	(2)	705	4	4430583
1046	28.6	12.9	0.9	chrX	47644343	47645216	(108395679)	C	L2a	LINE/L2	(2)	3424	2418	4434576
2353	13.1	0.0	0.3	chrX	47873655	47873967	(108166928)	C	AluSz	SINE/Alu	(0)	312	1	4434967
1836	14.6	0.7	0.4	chrX	48064474	48064747	(107976148)	C	AluSz	SINE/Alu	(21)	291	17	4435239
1731	16.8	1.5	8.9	chrX	48064748	48065028	(107975867)	+	MER58B	DNA/hAT-Charlie	73	341	(0)	4435238
1066	16.8	0.0	0.0	chrX	48065029	48065219	(107975676)	+	L1M5	LINE/L1	3383	3573	(2573)	4435240
1011	17.5	0.0	0.0	chrX	48303751	48303910	(107736985)	+	AluJr	SINE/Alu	146	305	(7)	4435788
207	37.9	6.7	1.4	chrX	51393216	51393357	(104647538)	+	L2c	LINE/L2	3009	3158	(217)	4440563
252	28.9	8.5	4.0	chrX	51393389	51393489	(104647406)	+	L2c	LINE/L2	3262	3367	(20)	4440563
214	21.5	5.8	3.0	chrX	51393578	51393644	(104647251)	+	MIRb	SINE/MIR	38	106	(162)	4440564
1210	27.3	4.1	7.0	chrX	51629553	51630191	(104410704)	C	L1MC5a	LINE/L1	(783)	1994	1400	4440886
3434	20.4	7.5	3.6	chrX	51630212	51630519	(104410376)	C	L1MD2	LINE/L1	(9)	6741	6427	4440889
4100	15.4	6.3	0.7	chrX	63295574	63296609	(92744286)	+	L1PA16	LINE/L1	6239	7325	(9)	4450022
1443	28.6	3.5	6.9	chrX	63296651	63297656	(92743239)	+	L1PREC2	LINE/L1	3074	4044	(2102)	4450027
596	26.2	18.0	0.5	chrX	68428122	68428336	(87612559)	+	MIRb	SINE/MIR	6	266	(2)	4456276
256	34.6	4.6	6.5	chrX	68428343	68428628	(87612267)	+	L2b	LINE/L2	3120	3383	(4)	4456277
195	18.9	10.2	7.0	chrX	72223710	72223766	(83817129)	C	Penelope1_Vert	LINE/Penelope	(989)	98	40	4462923
51873	6.9	1.1	2.4	chrX	72223767	72224476	(83816419)	+	HERVFH19-int	LTR/ERV1	1942	2683	(5036)	4462919
2217	10.3	0.7	0.0	chrX	72224477	72224768	(83816127)	+	AluSp	SINE/Alu	13	306	(7)	4462924
13	18.9	2.8	0.0	chrX	73076772	73076807	(82964088)	+	A-rich	Low_complexity	1	37	(0)	4464190
362	30.6	3.2	1.1	chrX	73076981	73077165	(82963730)	+	L1M5	LINE/L1	5595	5783	(341)	4464191
33233	19.9	1.1	1.6	chrX	73257495	73264087	(82776808)	C	HERVI-int	LTR/ERV1	(26)	7759	1197	4464356
658	31.1	9.2	1.2	chrX	77640507	77640926	(78399969)	+	L1MEc	LINE/L1	722	1178	(5909)	4468585
226	27.5	8.5	5.4	chrX	77641146	77641295	(78399600)	+	L1MEc	LINE/L1	1505	1667	(5420)	4468585
199	23.9	1.2	0.8	chrX	86030428	86030483	(70010412)	+	L2a	LINE/L2	3318	3425	(1)	4477634
46656	13.8	1.6	2.0	chrX	94009757	94015552	(62025343)	C	PABL_B-int	LTR/ERV1	(0)	7122	1324	4486351
1125	9.8	0.5	12.0	chrX	100889268	100889380	(55151515)	+	MLT1C	LTR/ERVL-MaLR	91	185	(282)	4494949
723	22.6	0.0	2.3	chrX	100889403	100889535	(55151360)	C	FLAM_A	SINE/Alu	(12)	130	1	4494951
1506	17.9	3.0	1.0	chrX	100889536	100889724	(55151171)	+	MLT1C	LTR/ERVL-MaLR	168	356	(111)	4494952
2111	14.6	0.0	0.0	chrX	100889725	100889999	(55150896)	+	AluJb	SINE/Alu	4	278	(34)	4494953
2686	2.7	0.7	0.0	chrX	103163808	103164106	(52876789)	+	AluYf1	SINE/Alu	1	301	(10)	4498172
5358	26.0	8.2	5.5	chrX	103164107	103164959	(52875936)	C	L1MDa	LINE/L1	(5620)	1013	293	4498170
4320	22.0	7.2	3.0	chrX	106115323	106116372	(49924523)	C	ERVL-E-int	LTR/ERVL	(2512)	3155	2059	4502408
2313	22.9	4.8	2.1	chrX	107235297	107235827	(48805068)	+	MLT1F	LTR/ERVL-MaLR	1	546	(2)	4503848
18	8.0	0.0	0.0	chrX	107349056	107349082	(48691813)	+	(TAG)n	Simple_repeat	1	27	(0)	4504028
501	27.5	11.5	2.0	chrX	107349083	107349279	(48691616)	C	MIRb	SINE/MIR	(18)	250	33	4504029
1738	17.5	2.4	2.4	chrX	107563426	107563764	(48477131)	C	MER58B	DNA/hAT-Charlie	(2)	339	1	4504391
1284	27.7	9.5	3.9	chrX	108747114	108747926	(47292969)	C	L2a	LINE/L2	(0)	3426	2543	4506183
14	18.8	0.0	2.6	chrX	111854739	111854776	(44186119)	+	(TGTTT)n	Simple_repeat	1	38	(0)	4510523
850	25.7	7.2	3.9	chrX	111855206	111855560	(44185335)	+	MLT1J1	LTR/ERVL-MaLR	16	408	(36)	4510524
1511	10.9	1.7	0.8	chrX	114801672	114801911	(41238984)	C	L1MA3	LINE/L1	(0)	6305	6064	4514546
16	10.0	0.0	5.6	chrX	114801948	114801983	(41238912)	+	(ATTTTA)n	Simple_repeat	1	36	(0)	4514547
6569	4.7	0.0	0.0	chrX	115217235	115218069	(40822826)	C	L1PA7	LINE/L1	(6)	6148	5314	4515102
555	13.8	0.0	0.0	chrX	115218070	115218149	(40822746)	+	AluSx3	SINE/Alu	215	294	(17)	4515103
3542	12.8	6.5	3.4	chrX	115218324	115218937	(40821958)	+	MER51A	LTR/ERV1	1	634	(0)	4515104
6851	23.8	7.0	8.2	chrX	116011054	116013855	(40027040)	+	HERVH-int	LTR/ERV1	1	2768	(4945)	4516219
19494	13.4	2.7	1.0	chrX	117408526	117415174	(38625721)	+	L1PA13	LINE/L1	16	6778	(5)	4517709
1909	20.6	9.0	4.0	chrX	125338800	125339326	(30701569)	+	LTR38	LTR/ERV1	1	556	(0)	4530000
16060	18.1	8.1	5.6	chrX	128080251	128084418	(27956477)	C	MER4-int	LTR/ERV1	(1073)	5525	1014	4532952
231	25.4	3.1	1.6	chrX	129123170	129123233	(26917662)	+	MIRc	SINE/MIR	79	143	(125)	4534262
716	33.5	7.6	1.6	chrX	129123310	129123804	(26917091)	C	L2	LINE/L2	(933)	2486	1960	4534263
45547	8.4	2.1	2.3	chrX	130280532	130283685	(25757210)	+	HERV4_I-int	LTR/ERV1	1	3108	(3431)	4536284
15	22.1	0.0	0.0	chrX	132355304	132355340	(23685555)	+	(TACA)n	Simple_repeat	1	37	(0)	4539254
3022	24.0	7.5	4.8	chrX	132355341	132356747	(23684148)	C	L1MEg	LINE/L1	(3675)	2644	1182	4539255
470	32.5	6.3	1.0	chrX	132917925	132918120	(23122775)	C	MIRc	SINE/MIR	(31)	237	31	4540105
2594	7.3	0.3	0.3	chrX	134726543	134726843	(21314052)	+	AluSc	SINE/Alu	1	301	(8)	4543266
2501	8.9	0.0	0.7	chrX	150567551	150567853	(5473042)	C	AluSx1	SINE/Alu	(11)	301	1	4566106
253	27.7	7.8	0.8	chrX	150567854	150567894	(5473001)	+	hAT-N1_Mam	DNA/hAT-Tip100?	218	259	(81)	4566105
15156	24.3	1.7	3.0	chrX	153095978	153100571	(2940324)	C	HERVH-int	LTR/ERV1	(1110)	5544	802	4569839
229	31.1	3.1	3.5	chrX	154716486	154716682	(1324213)	+	L1M5	LINE/L1	3796	3991	(2155)	4572310
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
471	23.6	1.6	5.4	chrY	11281810	11281939	(45945476)	C	MER21C	LTR/ERVL	(645)	223	99	4589057