2198	11.0	0.7	1.3	chr1	1016061	1016360	(247940062)	C	AluSx1	SINE/Alu	(14)	298	1	1282
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
1946	11.3	4.0	0.7	chr1	1472829	1473120	(247483302)	C	AluSx3	SINE/Alu	(7)	304	3	1804
1943	5.0	4.8	0.0	chr1	1473131	1473368	(247483054)	C	AluY	SINE/Alu	(2)	309	60	1805
777	13.5	0.0	0.0	chr1	2277181	2277284	(246679138)	C	AluSz6	SINE/Alu	(99)	213	110	3082
2395	7.8	0.6	0.3	chr1	2277285	2277630	(246678792)	+	THE1A	LTR/ERVL-MaLR	1	347	(8)	3083
235	24.1	19.4	1.8	chr1	3453096	3453205	(245503217)	+	MIR3	SINE/MIR	1	134	(74)	4013
16	3.3	0.0	10.0	chr1	3796670	3796691	(245159731)	+	(GGGTG)n	Simple_repeat	1	19	(0)	4362
2014	13.2	0.5	1.8	chr1	3800435	3800865	(245155557)	+	LTR38-int	LTR/ERV1	364	689	(1097)	4373
2135	12.0	0.9	0.3	chr1	3800866	3801192	(245155230)	C	THE1A	LTR/ERVL-MaLR	(0)	355	27	4374
16	0.0	0.0	0.0	chr1	3900329	3900346	(245056076)	+	(C)n	Simple_repeat	1	18	(0)	4533
140	18.5	0.7	0.0	chr1	4302955	4302983	(244653439)	+	(TTCCA)n	Simple_repeat	1	31	(0)	5121
64	6.2	1.1	1.1	chr1	4302984	4303071	(244653351)	+	(GTTCC)n	Simple_repeat	1	89	(0)	5122
140	18.5	0.7	0.0	chr1	4303072	4303312	(244653110)	+	(TTCCA)n	Simple_repeat	2	242	(0)	5123
12	13.8	11.9	3.0	chr1	6199328	6199386	(242757036)	+	G-rich	Low_complexity	1	66	(0)	7812
13	14.9	5.7	8.1	chr1	6392868	6392937	(242563485)	+	G-rich	Low_complexity	1	74	(0)	8131
14	17.8	0.0	2.9	chr1	6393307	6393340	(242563082)	+	(GGC)n	Simple_repeat	1	34	(0)	8132
17	10.5	0.0	10.0	chr1	6393473	6393525	(242562897)	+	(CCGCC)n	Simple_repeat	1	47	(0)	8133
14	24.0	1.5	6.0	chr1	6393526	6393533	(242562889)	+	(CGCGC)n	Simple_repeat	6	67	(0)	8134
18	18.6	0.0	7.1	chr1	6613790	6613845	(242342577)	+	(CCG)n	Simple_repeat	1	56	(0)	8544
19	22.5	0.0	10.0	chr1	6613962	6614061	(242342361)	+	(CCGCCC)n	Simple_repeat	1	100	(0)	8545
691	23.6	11.3	0.0	chr1	7543901	7544057	(241412365)	+	MER45A	DNA/hAT-Tip100	2	178	(0)	9975
2671	9.4	0.8	0.3	chr1	7544063	7544415	(241412007)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	9976
12	23.5	1.8	5.4	chr1	8703038	8703092	(240253330)	+	(GGCCGCT)n	Simple_repeat	1	56	(0)	12084
30	0.0	0.0	0.0	chr1	8817827	8817854	(240138568)	+	(T)n	Simple_repeat	1	28	(0)	12308
12	31.0	0.0	1.9	chr1	8818008	8818060	(240138362)	+	(CCGCCCC)n	Simple_repeat	1	53	(0)	12309
2470	9.8	1.6	0.3	chr1	8839985	8840343	(240116079)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	12364
1667	32.5	4.9	4.8	chr1	8840344	8840709	(240115713)	+	L2	LINE/L2	2426	2782	(637)	12363
516	33.9	3.6	5.1	chr1	15305413	15305544	(233650878)	+	MIRc	SINE/MIR	18	148	(120)	24983
2764	6.8	1.1	0.0	chr1	15305545	15305895	(233650527)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	24984
12487	7.7	0.9	0.1	chr1	15305896	15307461	(233648961)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	24984
473	21.4	3.7	2.8	chr1	15322421	15322526	(233633896)	C	MIRb	SINE/MIR	(122)	146	40	25013
942	17.9	6.3	0.0	chr1	15322539	15322717	(233633705)	C	MER3	DNA/hAT-Charlie	(18)	191	1	25014
2815	7.3	0.3	0.0	chr1	15322832	15323185	(233633237)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	25015
182	28.6	5.1	0.0	chr1	15323413	15323468	(233632954)	C	MIRc	SINE/MIR	(127)	141	83	25016
15	29.2	0.0	3.4	chr1	15617497	15617555	(233338867)	+	G-rich	Low_complexity	1	59	(0)	25685
16	10.4	3.2	0.0	chr1	15617534	15617564	(233338858)	+	(GAGC)n	Simple_repeat	1	32	(0)	25686
21	13.9	0.0	2.3	chr1	15617628	15617670	(233338752)	+	G-rich	Low_complexity	1	43	(0)	25687
23	19.2	1.9	0.0	chr1	16565983	16566036	(232390386)	+	GA-rich	Low_complexity	1	55	(0)	27764
12	23.1	3.7	3.6	chr1	16613393	16613446	(232342976)	+	(CCGCGCC)n	Simple_repeat	1	56	(0)	27819
16	7.0	3.1	3.0	chr1	16613537	16613568	(232342854)	+	(CCTGCG)n	Simple_repeat	1	33	(0)	27820
597	5.4	0.0	0.0	chr1	16727285	16727358	(232229064)	+	tRNA-Gly-GGG	tRNA	1	74	(0)	28015
13	23.0	5.0	3.2	chr1	16960884	16960943	(231995479)	+	(CTGGAG)n	Simple_repeat	1	63	(0)	28363
13	22.6	5.0	3.2	chr1	16961028	16961087	(231995335)	+	(GGCCTC)n	Simple_repeat	1	63	(0)	28364
26	0.0	0.0	0.0	chr1	16961206	16961230	(231995192)	+	(TGTTTT)n	Simple_repeat	1	25	(0)	28365
217	36.7	7.0	4.3	chr1	17343418	17343545	(231612877)	+	MIRb	SINE/MIR	1	141	(127)	29219
2395	10.2	3.1	0.9	chr1	17343546	17343892	(231612530)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	29220
12634	7.8	0.5	0.2	chr1	17343893	17345468	(231610954)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	29220
2448	8.1	3.1	0.9	chr1	17345469	17345815	(231610607)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	29220
108	5.7	1.9	1.9	chr1	17727622	17727775	(231228647)	+	(TTTC)n	Simple_repeat	1	157	(0)	30087
16	7.9	0.0	0.0	chr1	17727776	17727800	(231228622)	+	(CTTC)n	Simple_repeat	3	27	(0)	30088
30	7.6	0.0	0.0	chr1	17727803	17727844	(231228578)	+	(TCCC)n	Simple_repeat	1	42	(0)	30089
1495	19.6	4.5	2.3	chr1	17727845	17727897	(231228525)	C	AluJr	SINE/Alu	(4)	308	260	30090
2818	7.6	0.3	0.6	chr1	17727898	17728253	(231228169)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	30091
1495	19.6	4.5	2.3	chr1	17728254	17728500	(231227922)	C	AluJr	SINE/Alu	(53)	259	1	30090
2345	11.2	0.0	0.0	chr1	17888689	17888991	(231067431)	+	AluSx	SINE/Alu	1	303	(9)	30452
2528	8.5	0.6	5.1	chr1	17888992	17889320	(231067102)	C	THE1A	LTR/ERVL-MaLR	(38)	317	1	30451
2619	8.2	0.8	0.8	chr1	20629158	20629512	(228326910)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	36227
1554	18.4	4.3	0.4	chr1	20629561	20629831	(228326591)	+	AluJr	SINE/Alu	1	282	(30)	36228
521	17.4	0.0	1.2	chr1	22980664	22980749	(225975673)	+	AluJo	SINE/Alu	77	161	(151)	41403
477	26.1	8.4	0.0	chr1	22980783	22980935	(225975487)	C	L2a	LINE/L2	(614)	2805	2639	41396
1370	12.7	7.1	0.9	chr1	22980936	22981158	(225975264)	C	MER2	DNA/TcMar-Tigger	(0)	345	108	41404
296	31.1	3.2	3.2	chr1	23177413	23177535	(225778887)	+	MIRb	SINE/MIR	30	152	(116)	41785
11	21.7	0.0	2.9	chr1	23980380	23980414	(224976008)	+	(CTCCAC)n	Simple_repeat	1	35	(0)	43830
27	3.5	0.0	0.0	chr1	24187287	24187316	(224769106)	+	(CCCGCCT)n	Simple_repeat	1	30	(0)	44323
15	5.6	0.0	0.0	chr1	24187428	24187446	(224768976)	+	(G)n	Simple_repeat	1	19	(0)	44324
20	16.5	5.4	1.7	chr1	25431020	25431075	(223525347)	+	(GCG)n	Simple_repeat	1	59	(0)	47148
16	23.9	2.0	0.0	chr1	25431353	25431401	(223525021)	+	G-rich	Low_complexity	1	50	(0)	47149
21	15.3	1.8	5.2	chr1	27603927	27603983	(221352439)	+	(TCCC)n	Simple_repeat	1	58	(0)	52103
19	22.0	6.9	4.8	chr1	27604061	27604176	(221352246)	+	(CCTCGC)n	Simple_repeat	1	124	(0)	52104
12	25.3	0.0	2.5	chr1	27604230	27604269	(221352153)	+	G-rich	Low_complexity	1	40	(0)	52105
1980	13.9	5.8	1.4	chr1	27806678	27807041	(221149381)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	52583
351	24.1	0.0	1.2	chr1	28249719	28249798	(220706624)	+	L2b	LINE/L2	3296	3374	(1)	53652
336	23.1	11.4	1.3	chr1	28249870	28250027	(220706395)	+	MamRep605	LTR?	445	620	(229)	53653
2166	10.3	0.0	0.0	chr1	28540414	28540703	(220415719)	+	AluSz	SINE/Alu	1	290	(22)	54463
1222	16.5	1.0	0.0	chr1	28540811	28541010	(220415412)	C	AluSx	SINE/Alu	(8)	304	103	54464
721	21.2	2.5	9.2	chr1	28541096	28541150	(220415272)	C	MER3	DNA/hAT-Charlie	(6)	203	150	54465
2238	8.5	0.7	0.0	chr1	28541151	28541444	(220414978)	+	AluY	SINE/Alu	3	298	(13)	54466
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
1364	10.8	1.6	0.0	chr1	28649101	28649286	(220307136)	C	AluSc	SINE/Alu	(120)	189	1	54783
182	30.7	7.4	5.1	chr1	28668189	28668267	(220288155)	C	MIRc	SINE/MIR	(136)	132	52	54842
183	21.1	7.8	7.8	chr1	28668526	28668602	(220287820)	+	MIR3	SINE/MIR	116	192	(16)	54843
19	8.9	2.6	2.6	chr1	28668793	28668830	(220287592)	+	(CGCC)n	Simple_repeat	1	39	(0)	54844
40	17.9	2.9	3.7	chr1	28668844	28668954	(220287468)	+	G-rich	Low_complexity	1	110	(0)	54845
13	8.9	0.0	3.9	chr1	28914599	28914624	(220041798)	+	(TCGC)n	Simple_repeat	1	26	(0)	55498
16	32.2	1.2	2.5	chr1	28914778	28914857	(220041565)	+	(GGC)n	Simple_repeat	1	81	(0)	55499
19	20.8	0.0	6.3	chr1	29181798	29181860	(219774562)	+	(GGC)n	Simple_repeat	1	63	(0)	56088
614	28.6	8.7	0.9	chr1	29182217	29182438	(219773984)	+	MIRb	SINE/MIR	28	268	(0)	56089
11326	9.5	0.2	0.0	chr1	30142792	30144354	(218812068)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	15	57931
2393	12.2	0.3	0.0	chr1	30144355	30144708	(218811714)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	57931
2441	14.3	6.3	0.8	chr1	30144716	30145117	(218811305)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	57932
2648	10.2	0.3	0.0	chr1	30436214	30436567	(218519855)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	58418
11728	10.1	0.9	0.1	chr1	30436568	30438134	(218518288)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	58418
1932	7.2	0.4	0.0	chr1	30438135	30438371	(218518051)	+	THE1A	LTR/ERVL-MaLR	1	238	(117)	58418
1113	1.6	0.0	0.0	chr1	30438373	30438494	(218517928)	+	L1PA2	LINE/L1	126	247	(5908)	58419
28040	2.2	0.0	0.0	chr1	30438492	30444125	(218512297)	+	L1PA2	LINE/L1	520	6154	(1)	58419
26	0.0	6.2	0.0	chr1	31413154	31413185	(217543237)	+	(GGGGCC)n	Simple_repeat	1	34	(0)	60629
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
9938	7.2	0.6	0.7	chr1	31471934	31472399	(217484023)	C	L1PBa	LINE/L1	(2691)	4171	3707	60737
2619	9.9	0.0	0.8	chr1	31472400	31472757	(217483665)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	60738
11381	10.5	1.4	0.1	chr1	31472758	31474317	(217482105)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	60738
2244	12.9	0.0	0.0	chr1	31474360	31474661	(217481761)	+	AluSx3	SINE/Alu	2	303	(8)	60739
2525	7.8	3.1	4.2	chr1	31474662	31474977	(217481445)	C	THE1A	LTR/ERVL-MaLR	(31)	324	1	60738
9938	11.8	3.2	0.7	chr1	31474978	31478331	(217478091)	C	L1PBa	LINE/L1	(3156)	3706	255	60737
12	18.9	7.1	0.0	chr1	31763900	31763941	(217192481)	+	G-rich	Low_complexity	1	45	(0)	61275
19	16.5	5.4	1.7	chr1	31764048	31764103	(217192319)	+	(GGCGG)n	Simple_repeat	1	59	(0)	61276
771	21.9	7.7	2.3	chr1	32500104	32500323	(216456099)	+	L1MB5	LINE/L1	5928	6160	(14)	62986
29	2.9	2.8	0.0	chr1	32500418	32500453	(216455969)	+	(GGGCGAGA)n	Simple_repeat	1	37	(0)	62987
15	0.0	0.0	0.0	chr1	32500491	32500509	(216455913)	+	(GGC)n	Simple_repeat	1	19	(0)	62988
14	15.6	2.1	6.1	chr1	32500510	32500535	(216455887)	+	G-rich	Low_complexity	4	49	(0)	62989
12	24.8	0.0	0.0	chr1	32500698	32500731	(216455691)	+	(CCGG)n	Simple_repeat	1	34	(0)	62990
931	25.8	4.5	3.9	chr1	32500964	32501270	(216455152)	C	L1MC4	LINE/L1	(494)	7548	7240	62991
13	10.5	6.5	0.0	chr1	32539961	32539991	(216416431)	+	G-rich	Low_complexity	1	33	(0)	63101
2689	4.2	0.0	0.7	chr1	32963434	32963743	(215992679)	+	AluSx1	SINE/Alu	1	308	(4)	64112
44	24.0	4.7	2.8	chr1	32964394	32964565	(215991857)	+	(CCGCGG)n	Simple_repeat	1	180	(0)	64113
24	25.4	3.8	0.0	chr1	32964720	32964798	(215991624)	+	(CGC)n	Simple_repeat	1	82	(0)	64114
12	11.1	0.0	8.6	chr1	32973105	32973139	(215983283)	+	(GCCCCC)n	Simple_repeat	1	35	(0)	64134
12	16.5	0.0	0.0	chr1	32973206	32973232	(215983190)	+	G-rich	Low_complexity	1	27	(0)	64135
14	27.3	0.0	3.6	chr1	33181241	33181328	(215775094)	+	G-rich	Low_complexity	1	84	(0)	64626
16	29.2	2.7	5.3	chr1	33349580	33349689	(215606733)	+	(CCCGG)n	Simple_repeat	1	113	(0)	64945
2142	8.2	4.4	0.0	chr1	35079830	35080109	(213876313)	+	AluSx1	SINE/Alu	1	293	(19)	67988
2092	10.1	1.0	0.3	chr1	35640928	35641213	(213315209)	+	AluSp	SINE/Alu	20	307	(6)	69124
26	26.9	5.3	0.8	chr1	35808056	35808168	(213148254)	+	(CCCGCG)n	Simple_repeat	1	119	(0)	69521
28	0.0	0.0	0.0	chr1	35808171	35808196	(213148226)	+	(GGC)n	Simple_repeat	1	26	(0)	69522
14	27.3	0.0	3.6	chr1	35808242	35808314	(213148108)	+	(CCCCGC)n	Simple_repeat	1	70	(0)	69523
26	0.0	0.0	0.0	chr1	35808339	35808363	(213148059)	+	(GCG)n	Simple_repeat	1	25	(0)	69524
13	11.6	12.2	1.8	chr1	35883203	35883251	(213073171)	+	(CTGGCAG)n	Simple_repeat	1	55	(0)	69699
21	12.9	2.3	2.2	chr1	35883255	35883298	(213073124)	+	(GCG)n	Simple_repeat	1	45	(0)	69700
182	33.3	0.0	0.0	chr1	36385410	36385460	(212570962)	+	MIRb	SINE/MIR	55	105	(163)	70746
14	22.6	2.4	0.0	chr1	36385664	36385705	(212570717)	+	(CCCGCTC)n	Simple_repeat	1	43	(0)	70747
12	26.2	4.0	0.0	chr1	36385706	36385713	(212570709)	+	(CCCGCAC)n	Simple_repeat	1	52	(0)	70748
1746	16.6	3.9	8.8	chr1	37349437	37349820	(211606602)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	72557
2247	13.5	4.5	0.6	chr1	37356907	37357270	(211599152)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	72573
12	10.2	0.0	10.3	chr1	37514263	37514301	(211442121)	+	(TCCCCC)n	Simple_repeat	1	39	(0)	72892
16	20.8	2.6	7.6	chr1	37514389	37514465	(211441957)	+	(CCGCTC)n	Simple_repeat	1	79	(0)	72893
12	16.0	0.0	3.3	chr1	37514529	37514558	(211441864)	+	(CGCCG)n	Simple_repeat	1	30	(0)	72894
252	36.2	11.2	3.7	chr1	37514970	37515379	(211441043)	+	L2	LINE/L2	2428	2872	(547)	72895
208	32.4	7.2	1.1	chr1	37990316	37990440	(210965982)	+	MIR3	SINE/MIR	15	154	(114)	73868
2434	7.0	0.0	2.9	chr1	37990482	37990794	(210965628)	+	AluSx1	SINE/Alu	1	304	(8)	73869
23	28.3	0.0	5.8	chr1	38046412	38046515	(210909907)	+	(CCG)n	Simple_repeat	1	104	(0)	73972
28	3.3	0.0	0.0	chr1	38046632	38046662	(210909760)	+	(CCG)n	Simple_repeat	1	31	(0)	73973
20	27.3	0.0	1.6	chr1	38859494	38859557	(210096865)	+	(GCCTCC)n	Simple_repeat	1	64	(0)	75454
17	28.2	2.6	2.6	chr1	38859558	38859569	(210096853)	+	(GCC)n	Simple_repeat	1	78	(0)	75455
32	22.4	2.3	6.1	chr1	38859656	38859677	(210096745)	+	(GCC)n	Simple_repeat	1	27	(104)	75456
16	8.3	0.0	0.0	chr1	38859678	38859703	(210096719)	+	(CAGGC)n	Simple_repeat	1	26	(0)	75457
32	22.4	2.3	6.1	chr1	38859704	38859783	(210096639)	+	(GCC)n	Simple_repeat	28	131	(0)	75456
11	14.2	10.3	0.0	chr1	38991486	38991524	(209964898)	+	G-rich	Low_complexity	1	43	(0)	75807
18	6.5	2.9	2.9	chr1	39105322	39105355	(209851067)	+	(GCC)n	Simple_repeat	1	35	(0)	76100
15	0.0	0.0	0.0	chr1	39106029	39106047	(209850375)	+	(GGA)n	Simple_repeat	1	19	(0)	76101
495	23.4	18.0	3.6	chr1	40097466	40097687	(208858735)	C	MIR	SINE/MIR	(0)	262	2	78100
19	23.2	0.0	3.4	chr1	40979621	40979679	(207976743)	+	(CCCGC)n	Simple_repeat	1	59	(0)	79990
27	17.8	4.0	5.8	chr1	41242139	41242240	(207714182)	+	(GCGG)n	Simple_repeat	1	100	(0)	80410
1594	21.5	5.4	2.6	chr1	41822934	41823311	(207133111)	+	MLT1B	LTR/ERVL-MaLR	2	390	(0)	81513
452	27.5	7.1	2.8	chr1	41823321	41823496	(207132926)	C	MIRb	SINE/MIR	(64)	204	21	81514
1521	26.2	8.7	0.9	chr1	42027155	42027632	(206928790)	+	L2a	LINE/L2	2549	3067	(359)	81825
2917	5.7	1.1	0.0	chr1	42027633	42027983	(206928439)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	81826
12315	9.8	1.3	0.1	chr1	42626926	42628486	(206327936)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	82853
2828	9.3	0.3	0.0	chr1	42628487	42628840	(206327582)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	82853
18134	12.9	2.8	2.5	chr1	42628841	42629621	(206326801)	C	L1MA4A	LINE/L1	(4213)	3352	2549	82848
417	17.1	14.6	2.8	chr1	42657959	42658066	(206298356)	C	L2a	LINE/L2	(17)	3409	3287	82917
17	10.1	3.1	0.0	chr1	42958185	42958216	(205998206)	+	(GCCGGG)n	Simple_repeat	1	33	(0)	83430
11	26.8	3.6	1.8	chr1	43530684	43530738	(205425684)	+	G-rich	Low_complexity	1	57	(0)	84462
48	8.0	0.0	0.0	chr1	43530912	43530977	(205425445)	+	(CGGCTC)n	Simple_repeat	1	66	(0)	84463
14	18.9	4.8	0.0	chr1	43531119	43531160	(205425262)	+	(CCCCT)n	Simple_repeat	1	44	(0)	84464
22	22.8	3.8	2.4	chr1	43707610	43707689	(205248733)	+	(CGCCTC)n	Simple_repeat	1	83	(0)	84746
13	20.9	0.0	0.0	chr1	43707750	43707782	(205248640)	+	(CCGCC)n	Simple_repeat	1	33	(0)	84747
15	25.3	2.6	5.1	chr1	43707772	43707848	(205248574)	+	G-rich	Low_complexity	1	79	(0)	84748
30	21.0	0.0	0.0	chr1	44405166	44405226	(204551196)	+	(TG)n	Simple_repeat	1	61	(0)	85972
29	19.0	0.0	3.0	chr1	44405366	44405438	(204550984)	+	(GCC)n	Simple_repeat	1	70	(0)	85973
16	14.2	0.0	0.0	chr1	44405661	44405691	(204550731)	+	(GGACTG)n	Simple_repeat	1	31	(0)	85974
12	11.5	3.3	3.2	chr1	44417620	44417649	(204538773)	+	(CCTC)n	Simple_repeat	1	31	(0)	85980
2133	13.9	6.9	1.2	chr1	45240118	45240460	(203715962)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	87575
11479	9.3	2.7	0.7	chr1	45241056	45242307	(203714115)	C	THE1B-int	LTR/ERVL-MaLR	(301)	1279	6	87575
2520	11.3	3.0	1.1	chr1	45242313	45242669	(203713753)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	87575
13	21.9	0.0	2.6	chr1	45303630	45303668	(203652754)	+	(GGAGCC)n	Simple_repeat	1	39	(0)	87710
34	16.8	3.2	4.1	chr1	46198396	46198489	(202757933)	+	(CGC)n	Simple_repeat	1	97	(0)	89528
30	5.7	0.0	0.0	chr1	46198519	46198555	(202757867)	+	(GGC)n	Simple_repeat	1	37	(0)	89529
348	31.6	6.9	8.2	chr1	47333318	47333668	(201622754)	+	L2a	LINE/L2	2989	3336	(39)	91367
19	12.1	0.0	2.6	chr1	47333870	47333907	(201622515)	+	(CCCGC)n	Simple_repeat	1	38	(0)	91369
264	28.8	3.6	3.6	chr1	48040842	48040924	(200915498)	C	MIRb	SINE/MIR	(79)	189	107	92794
270	35.8	10.2	6.4	chr1	48041002	48041189	(200915233)	+	L2b	LINE/L2	3171	3366	(9)	92795
2557	11.0	0.3	0.0	chr1	48371702	48372055	(200584367)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	93202
276	22.1	2.3	0.0	chr1	50333392	50333477	(198622945)	C	MIRc	SINE/MIR	(136)	132	45	96596
676	26.7	3.4	3.2	chr1	50930917	50931267	(198025155)	C	L1MEf	LINE/L1	(3756)	2563	2223	97653
2127	10.1	0.0	4.4	chr1	50931349	50931589	(198024833)	C	THE1A	LTR/ERVL-MaLR	(0)	355	119	97654
2147	10.1	1.0	3.4	chr1	50931590	50931886	(198024536)	+	AluY	SINE/Alu	5	294	(17)	97655
21	9.2	0.0	2.7	chr1	50959881	50959917	(197996505)	+	(CCG)n	Simple_repeat	1	37	(0)	97704
14	13.1	0.0	0.0	chr1	50960185	50960210	(197996212)	+	(CGAG)n	Simple_repeat	1	26	(0)	97705
20	25.0	0.0	0.0	chr1	50960209	50960260	(197996162)	+	(CGC)n	Simple_repeat	1	52	(0)	97706
28	21.8	3.0	7.2	chr1	50968529	50968662	(197987760)	+	G-rich	Low_complexity	1	138	(0)	97721
13	23.3	0.0	0.0	chr1	51236363	51236397	(197720025)	+	(GCA)n	Simple_repeat	1	35	(0)	98248
23	13.7	2.7	7.8	chr1	51519364	51519438	(197436984)	+	(CCCG)n	Simple_repeat	1	77	(0)	98834
244	31.8	7.0	0.9	chr1	51519558	51519665	(197436757)	+	MIRb	SINE/MIR	88	202	(66)	98835
12	23.2	0.0	4.5	chr1	51878751	51878794	(197077628)	+	(CCCTCCG)n	Simple_repeat	1	44	(0)	99630
14	22.6	0.0	0.0	chr1	52142246	52142281	(196814141)	+	(AGC)n	Simple_repeat	1	36	(0)	100279
19	14.1	0.0	2.4	chr1	52552993	52553033	(196403389)	+	(CCGCCG)n	Simple_repeat	1	41	(0)	101091
38	25.3	0.8	2.5	chr1	52553102	52553219	(196403203)	+	G-rich	Low_complexity	1	119	(0)	101092
32	0.0	0.0	0.0	chr1	52726473	52726502	(196229920)	+	(GGCTGC)n	Simple_repeat	1	30	(0)	101582
30	5.5	0.0	0.0	chr1	53739163	53739200	(195217222)	+	(GCAGCCGCC)n	Simple_repeat	1	38	(0)	103661
2341	10.2	3.4	0.9	chr1	53850681	53851026	(195105396)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	103893
3731	6.7	0.0	0.0	chr1	54166117	54166609	(194789813)	C	THE1A-int	LTR/ERVL-MaLR	(1087)	493	1	104560
2749	8.0	1.1	0.0	chr1	54166610	54166960	(194789462)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	104560
2568	9.7	1.4	0.0	chr1	54466918	54467267	(194489155)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	105148
12124	8.6	0.7	1.5	chr1	54467268	54467629	(194488793)	+	THE1A-int	LTR/ERVL-MaLR	1	370	(1210)	105148
12124	8.6	0.7	1.5	chr1	54468270	54469452	(194486970)	+	THE1A-int	LTR/ERVL-MaLR	406	1580	(0)	105148
2555	9.4	0.8	0.8	chr1	54469455	54469807	(194486615)	+	THE1A	LTR/ERVL-MaLR	3	355	(0)	105151
447	17.4	9.2	13.9	chr1	54469808	54469875	(194486547)	+	MER53	DNA/hAT	98	162	(31)	105146
287	30.3	5.7	0.0	chr1	54541903	54542001	(194414421)	+	L2b	LINE/L2	3267	3371	(4)	105333
2805	8.2	0.3	0.0	chr1	55030953	55031306	(193925116)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	106391
12080	9.5	0.5	0.2	chr1	55031307	55032881	(193923541)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	106391
2627	10.0	0.6	0.0	chr1	55032882	55033231	(193923191)	+	THE1A	LTR/ERVL-MaLR	1	352	(3)	106391
701	27.8	15.9	2.3	chr1	55033232	55033680	(193922742)	+	L2a	LINE/L2	2833	3408	(18)	106385
13	16.5	0.0	5.3	chr1	55215174	55215211	(193741211)	+	(CGCGC)n	Simple_repeat	1	38	(0)	106639
13	20.1	0.0	2.8	chr1	55215315	55215350	(193741072)	+	(GGCGC)n	Simple_repeat	1	36	(0)	106640
17	8.1	0.0	0.0	chr1	55215359	55215384	(193741038)	+	(CCT)n	Simple_repeat	1	26	(0)	106641
617	35.2	6.0	5.4	chr1	55305353	55305796	(193650626)	+	L2b	LINE/L2	2929	3375	(0)	106824
1042	31.9	8.0	1.7	chr1	55305899	55306422	(193650000)	+	MLT1L	LTR/ERVL-MaLR	48	607	(3)	106825
2566	9.7	0.8	0.8	chr1	55342890	55343244	(193613178)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	106923
17765	16.4	7.7	1.4	chr1	55779896	55783183	(193173239)	C	ERVL-int	LTR/ERVL	(0)	5757	2244	107702
21	3.5	0.0	0.0	chr1	56578777	56578805	(192377617)	+	(CGGCG)n	Simple_repeat	1	29	(0)	109121
33	7.0	0.0	0.0	chr1	56579466	56579510	(192376912)	+	(CCTCCTGCT)n	Simple_repeat	1	45	(0)	109122
15	15.3	0.0	0.0	chr1	56579513	56579541	(192376881)	+	(TGC)n	Simple_repeat	1	29	(0)	109123
19	16.7	3.4	4.9	chr1	56645326	56645384	(192311038)	+	(GGC)n	Simple_repeat	1	61	(0)	109245
18	26.9	1.4	2.8	chr1	56645567	56645637	(192310785)	+	G-rich	Low_complexity	1	72	(0)	109246
248	29.3	5.4	3.1	chr1	56645692	56645853	(192310569)	+	MIR3	SINE/MIR	22	187	(21)	109247
1759	13.7	9.7	2.3	chr1	56735539	56735890	(192220532)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	109406
184	25.6	0.0	0.0	chr1	56803941	56803983	(192152439)	+	MER5B	DNA/hAT-Charlie	1	43	(135)	109532
2379	12.9	1.7	0.8	chr1	56846566	56846917	(192109505)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	109622
12040	9.7	1.7	0.3	chr1	56846918	56848475	(192107947)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	109622
12101	12.2	0.3	0.0	chr1	58370977	58372602	(190583820)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	112727
1955	15.6	5.8	3.2	chr1	58372603	58372973	(190583449)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	112727
305	27.9	2.6	1.0	chr1	58372975	58373116	(190583306)	+	L1ME3Cz	LINE/L1	869	997	(0)	112728
1263	27.7	7.4	3.1	chr1	58481515	58481633	(190474789)	+	HAL1	LINE/L1	1886	2008	(499)	112970
2616	10.0	4.1	0.6	chr1	58481634	58481984	(190474438)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	112971
1263	27.7	7.4	3.1	chr1	58481985	58482448	(190473974)	+	HAL1	LINE/L1	2009	2496	(11)	112970
2551	10.5	0.8	1.1	chr1	58636654	58637009	(190319413)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	113225
592	22.0	17.3	0.0	chr1	58637027	58637203	(190319219)	+	HAL1	LINE/L1	1698	1911	(596)	113226
699	33.1	0.7	7.8	chr1	59087261	59087302	(189869120)	+	MamRep38	DNA/hAT	1	42	(253)	114170
2608	7.6	3.1	0.3	chr1	59087303	59087647	(189868775)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	114171
2354	11.4	1.1	0.8	chr1	59088975	59089328	(189867094)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	114173
251	26.8	1.1	2.3	chr1	59107928	59108015	(189848407)	C	MIR3	SINE/MIR	(86)	122	36	114218
3356	8.4	1.1	0.0	chr1	59515081	59515522	(189440900)	+	THE1A-int	LTR/ERVL-MaLR	1134	1580	(0)	115005
2473	12.4	2.0	0.3	chr1	59515523	59515871	(189440551)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	115005
305	35.5	8.5	4.7	chr1	59572336	59572719	(189383703)	C	L2c	LINE/L2	(410)	3009	2610	115097
965	30.1	7.0	8.9	chr1	60246283	60246510	(188709912)	C	L2a	LINE/L2	(680)	2739	2538	116223
1654	12.2	0.4	0.0	chr1	60246511	60246747	(188709675)	C	THE1A	LTR/ERVL-MaLR	(0)	355	118	116225
18699	6.6	1.0	0.0	chr1	60246749	60249082	(188707340)	+	HERVL-int	LTR/ERVL	3298	5654	(0)	116226
818	26.8	13.6	0.3	chr1	60286935	60287278	(188669144)	+	MLT1J2	LTR/ERVL-MaLR	9	405	(43)	116311
1807	12.5	9.4	2.5	chr1	60287292	60287645	(188668777)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	116312
429	33.7	7.5	7.3	chr1	60795570	60795981	(188160441)	C	L2c	LINE/L2	(5)	3382	2967	117127
2330	11.1	1.1	0.8	chr1	60795982	60796335	(188160087)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	117128
429	33.7	7.5	7.3	chr1	60796336	60796373	(188160049)	C	L2c	LINE/L2	(421)	2966	2931	117127
11	27.7	0.0	2.2	chr1	61083454	61083498	(187872924)	+	(GGCCCC)n	Simple_repeat	1	45	(0)	117654
23	17.7	1.6	4.7	chr1	61083755	61083817	(187872605)	+	(CCG)n	Simple_repeat	1	64	(0)	117655
1418	13.0	1.3	3.5	chr1	61493806	61494036	(187462386)	C	AluSx3	SINE/Alu	(3)	308	83	118241
28	20.4	2.4	3.5	chr1	62688241	62688324	(186268098)	+	(GGC)n	Simple_repeat	1	86	(0)	120631
396	27.3	4.4	3.6	chr1	62688984	62689134	(186267288)	C	MIRb	SINE/MIR	(95)	173	20	120632
2233	9.3	3.6	0.0	chr1	63233503	63233793	(185722629)	+	AluSg	SINE/Alu	1	302	(8)	121658
1894	15.0	3.7	2.6	chr1	63233794	63234097	(185722325)	C	THE1D	LTR/ERVL-MaLR	(67)	314	1	121657
5030	16.9	3.7	2.3	chr1	63234098	63234693	(185721729)	C	L1MB2	LINE/L1	(522)	5649	5041	121655
22	20.2	7.4	1.1	chr1	63523647	63523727	(185432695)	+	(TCTCTG)n	Simple_repeat	1	87	(0)	122201
12	17.6	4.0	5.8	chr1	63594013	63594062	(185362360)	+	(CTCTCC)n	Simple_repeat	1	52	(0)	122314
13	12.5	0.0	0.0	chr1	63773832	63773857	(185182565)	+	(GGAGG)n	Simple_repeat	1	26	(0)	122680
13	9.7	0.0	0.0	chr1	63774051	63774072	(185182350)	+	(GCC)n	Simple_repeat	1	22	(0)	122681
1834	12.2	6.3	3.4	chr1	63830318	63830672	(185125750)	C	THE1D	LTR/ERVL-MaLR	(15)	366	1	122790
2439	12.5	0.0	0.0	chr1	63900172	63900476	(185055946)	+	AluSx1	SINE/Alu	1	305	(7)	122912
196	32.0	2.6	0.0	chr1	63900524	63900598	(185055824)	C	MIR3	SINE/MIR	(15)	193	117	122913
2115	12.7	4.7	0.6	chr1	64026549	64026913	(184929509)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	123154
1142	19.0	1.2	4.7	chr1	64069829	64070082	(184886340)	C	L1MB5	LINE/L1	(8)	6166	5922	123244
2015	13.4	3.9	8.6	chr1	64089776	64090158	(184866264)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	123284
17	17.4	2.5	0.0	chr1	64470366	64470405	(184486017)	+	(CGGCTC)n	Simple_repeat	1	41	(0)	123959
13	25.8	2.2	0.0	chr1	64744885	64744930	(184211492)	+	G-rich	Low_complexity	1	47	(0)	124430
13	18.9	2.8	0.0	chr1	64745015	64745050	(184211372)	+	(CCTCCTC)n	Simple_repeat	1	37	(0)	124431
25	25.0	3.5	1.1	chr1	64745175	64745261	(184211161)	+	(GGCGGC)n	Simple_repeat	1	90	(0)	124432
309	28.2	9.4	4.5	chr1	65002361	65002589	(183953833)	+	MIRb	SINE/MIR	8	251	(17)	124873
13	9.8	0.0	0.0	chr1	65002691	65002712	(183953710)	+	(CGG)n	Simple_repeat	1	22	(0)	124874
19	0.0	0.0	0.0	chr1	65003014	65003034	(183953388)	+	(T)n	Simple_repeat	1	21	(0)	124875
12	15.3	3.5	0.0	chr1	65066511	65066539	(183889883)	+	(CCCT)n	Simple_repeat	1	30	(0)	125012
23	15.3	0.0	5.4	chr1	65066726	65066781	(183889641)	+	(TCC)n	Simple_repeat	1	56	(0)	125013
12	16.8	0.0	0.0	chr1	65066925	65066951	(183889471)	+	(CCCCT)n	Simple_repeat	1	27	(0)	125014
15	7.5	0.0	6.2	chr1	65067136	65067167	(183889255)	+	(GGCCC)n	Simple_repeat	1	32	(0)	125015
11	18.1	2.4	4.8	chr1	65067257	65067297	(183889125)	+	(GCCCCCG)n	Simple_repeat	1	42	(0)	125016
1890	15.6	0.0	4.6	chr1	65114166	65114346	(183842076)	+	AluJb	SINE/Alu	134	312	(0)	125129
17	26.4	3.4	4.4	chr1	65309246	65309333	(183647089)	+	(CCCT)n	Simple_repeat	1	91	(0)	125552
14	4.3	4.2	0.0	chr1	65309511	65309534	(183646888)	+	(CTCC)n	Simple_repeat	1	25	(0)	125553
2589	10.2	0.6	0.6	chr1	65384435	65384798	(183571624)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	125693
16	20.4	6.8	1.6	chr1	66924885	66924943	(182031479)	+	GA-rich	Low_complexity	1	63	(0)	127976
21	22.9	0.0	0.0	chr1	66925047	66925094	(182031328)	+	(GGC)n	Simple_repeat	1	48	(0)	127977
13	12.2	8.3	0.0	chr1	66930267	66930302	(182026120)	+	(GGCAGC)n	Simple_repeat	1	39	(0)	127982
15	25.9	1.4	5.6	chr1	67053630	67053700	(181902722)	+	(GCCC)n	Simple_repeat	1	72	(0)	128151
27	21.7	1.5	0.0	chr1	67053742	67053806	(181902616)	+	(GCC)n	Simple_repeat	1	66	(0)	128152
226	30.0	15.4	0.0	chr1	67457251	67457360	(181499062)	+	L2c	LINE/L2	3258	3387	(0)	128881
192	33.3	2.2	2.2	chr1	67457743	67457831	(181498591)	C	L3	LINE/CR1	(1)	4098	4010	128882
1857	13.4	4.1	1.1	chr1	67457872	67458154	(181498268)	+	AluJb	SINE/Alu	1	292	(20)	128883
2864	7.9	0.0	0.0	chr1	67509191	67509545	(181446877)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	129014
2193	12.7	0.7	0.0	chr1	67509599	67509897	(181446525)	C	AluSz	SINE/Alu	(11)	301	1	129015
1011	29.5	7.5	5.3	chr1	67855304	67855885	(181100537)	C	L2a	LINE/L2	(0)	3426	2831	129708
13787	15.2	3.4	4.8	chr1	68031999	68034371	(180922051)	C	Tigger2	DNA/TcMar-Tigger	(59)	2659	343	130010
2234	12.5	0.8	1.1	chr1	68034372	68034727	(180921695)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	130012
13787	15.2	3.4	4.8	chr1	68034728	68035049	(180921373)	C	Tigger2	DNA/TcMar-Tigger	(2376)	342	1	130010
2332	11.9	0.6	0.8	chr1	68395023	68395378	(180561044)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	130586
11251	9.3	2.9	0.0	chr1	68395381	68396913	(180559509)	C	THE1A-int	LTR/ERVL-MaLR	(2)	1578	1	130586
1806	29.3	5.5	3.2	chr1	68520683	68520820	(180435602)	C	L1MEf	LINE/L1	(5833)	714	563	130780
1877	13.7	6.0	6.0	chr1	68520821	68521201	(180435221)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	130786
1806	29.3	5.5	3.2	chr1	68521202	68521682	(180434740)	C	L1MEf	LINE/L1	(5985)	562	81	130780
1801	14.7	8.7	1.7	chr1	69332493	69332846	(179623576)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	131889
4707	22.9	4.7	3.2	chr1	69332847	69334313	(179622109)	C	L1M2	LINE/L1	(3843)	3719	2236	131888
23	17.8	0.0	0.0	chr1	69568269	69568313	(179388109)	+	(CGC)n	Simple_repeat	1	45	(0)	132182
1613	26.5	4.7	3.2	chr1	69736929	69737153	(179219269)	+	LTR55	LTR/ERVL?	3	238	(310)	132398
2239	12.8	1.6	2.5	chr1	69737154	69737520	(179218902)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	132399
1613	26.5	4.7	3.2	chr1	69737521	69737824	(179218598)	+	LTR55	LTR/ERVL?	239	540	(8)	132398
15	25.6	0.0	0.0	chr1	70221199	70221232	(178735190)	+	GA-rich	Low_complexity	1	34	(0)	133041
22	11.7	1.9	5.7	chr1	70221460	70221511	(178734911)	+	(GCG)n	Simple_repeat	1	53	(0)	133042
20	22.2	0.0	0.0	chr1	70221683	70221729	(178734693)	+	(GCG)n	Simple_repeat	1	47	(0)	133043
231	24.2	3.4	1.2	chr1	70355068	70355173	(178601249)	C	L2b	LINE/L2	(4)	3383	3274	133274
2555	23.9	9.7	1.9	chr1	70684531	70685510	(178270912)	C	L1PB4	LINE/L1	(4501)	2418	1302	133823
467	33.9	6.4	1.8	chr1	70685513	70685794	(178270628)	C	L1PB4	LINE/L1	(5290)	1629	1334	133823
2209	13.2	1.7	0.3	chr1	70930497	70930846	(178025576)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	134155
11672	9.7	0.3	0.0	chr1	70930847	70932421	(178024001)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	134155
2416	11.0	1.7	0.0	chr1	70938529	70938873	(178017549)	C	THE1A	LTR/ERVL-MaLR	(2)	353	3	134167
11288	10.7	0.4	0.1	chr1	70938880	70940454	(178015968)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	134167
2620	9.3	0.3	1.1	chr1	70947198	70947555	(178008867)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	134180
336	19.3	0.0	0.0	chr1	71433278	71433334	(177523088)	C	L1MA9	LINE/L1	(89)	6223	6167	134861
2177	10.4	5.1	0.9	chr1	71433444	71433783	(177522639)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	134865
2009	10.6	0.0	7.3	chr1	71867071	71867372	(177089050)	+	AluSz	SINE/Alu	1	280	(32)	135458
243	37.6	0.0	0.8	chr1	71867458	71867583	(177088839)	+	L3	LINE/CR1	3711	3835	(264)	135459
35	0.0	0.0	0.0	chr1	72282595	72282627	(176673795)	+	(T)n	Simple_repeat	1	33	(0)	136018
18	14.1	8.3	0.0	chr1	72282717	72282764	(176673658)	+	(CCTCC)n	Simple_repeat	1	52	(0)	136019
16	18.8	2.8	8.2	chr1	72282765	72282787	(176673635)	+	(CCT)n	Simple_repeat	1	73	(0)	136020
28	17.9	3.7	3.6	chr1	72282853	72282933	(176673489)	+	(GGC)n	Simple_repeat	1	84	(0)	136021
32	7.4	0.0	0.0	chr1	72282939	72282981	(176673441)	+	(CAG)n	Simple_repeat	1	43	(0)	136022
28	25.9	0.0	0.0	chr1	72283089	72283162	(176673260)	+	A-rich	Low_complexity	1	74	(0)	136023
2496	10.7	0.0	0.6	chr1	72738214	72738570	(176217852)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	136595
518	31.7	9.0	5.6	chr1	73548601	73549061	(175407361)	C	L1MEd	LINE/L1	(4909)	2177	1700	137522
1804	16.0	5.0	3.9	chr1	73549064	73549421	(175407001)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	137523
12	28.7	0.0	0.0	chr1	74571739	74571780	(174384642)	+	(CCGTCC)n	Simple_repeat	1	42	(0)	138845
232	34.1	1.2	0.0	chr1	74967712	74967796	(173988626)	+	UCON65	Unknown	274	359	(99)	139372
281	36.1	10.0	3.6	chr1	75357416	75357722	(173598700)	C	L2c	LINE/L2	(20)	3367	3039	139851
18	12.0	0.0	5.0	chr1	75616022	75616061	(173340361)	+	(CGGCT)n	Simple_repeat	1	40	(0)	140186
23	22.0	3.2	0.0	chr1	75616111	75616185	(173340237)	+	(TGC)n	Simple_repeat	1	77	(0)	140187
15	22.0	0.0	2.3	chr1	75616217	75616291	(173340131)	+	(CCACCCC)n	Simple_repeat	1	73	(0)	140188
1367	25.4	5.7	4.1	chr1	75689584	75690092	(173266330)	+	MER66-int	LTR/ERV1	6135	6650	(26)	140290
1896	12.8	7.6	1.9	chr1	75690093	75690451	(173265971)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	140291
1367	25.4	5.7	4.1	chr1	75690452	75690474	(173265948)	+	MER66-int	LTR/ERV1	6651	6676	(0)	140290
2378	13.0	0.8	0.0	chr1	75690477	75690845	(173265577)	+	MER41E	LTR/ERV1	1	372	(223)	140290
15	30.4	1.4	2.7	chr1	75724615	75724686	(173231736)	+	(CCGCC)n	Simple_repeat	1	73	(0)	140345
1907	16.0	1.6	0.3	chr1	75801887	75802186	(173154236)	+	AluJo	SINE/Alu	1	304	(8)	140480
184	31.8	6.0	3.1	chr1	75802248	75802409	(173154013)	C	L2	LINE/L2	(1077)	2342	2176	140475
244	32.2	4.1	1.1	chr1	75802486	75802579	(173153843)	C	MIRb	SINE/MIR	(15)	253	157	140481
12	22.1	0.0	0.0	chr1	77281649	77281680	(171674742)	+	(GTGTGT)n	Simple_repeat	1	32	(0)	142614
12	20.6	1.7	8.3	chr1	77281880	77281938	(171674484)	+	(GCGCG)n	Simple_repeat	1	60	(0)	142615
14	14.6	0.0	3.1	chr1	77683302	77683333	(171273089)	+	(CGC)n	Simple_repeat	1	32	(0)	143293
18	24.2	0.0	3.5	chr1	77683479	77683535	(171272887)	+	(GGC)n	Simple_repeat	1	57	(0)	143294
201	21.3	10.7	5.1	chr1	77742255	77742268	(171214154)	C	MIRb	SINE/MIR	(51)	217	204	143399
780	23.3	2.3	5.4	chr1	77742269	77742490	(171213932)	C	MER20	DNA/hAT-Charlie	(0)	219	5	143400
201	21.3	10.7	5.1	chr1	77742491	77742554	(171213868)	C	MIRb	SINE/MIR	(65)	203	134	143399
18	7.7	0.0	0.0	chr1	77888599	77888626	(171067796)	+	(CGG)n	Simple_repeat	1	28	(0)	143695
525	32.3	1.8	2.4	chr1	78346803	78346967	(170609455)	C	MamGypLTR3	LTR/Gypsy	(458)	436	273	144466
1891	12.5	7.1	7.6	chr1	79463533	79463914	(169492508)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	145940
7166	12.3	4.7	2.0	chr1	79463916	79465236	(169491186)	C	THE1D-int	LTR/ERVL-MaLR	(1)	1630	171	145940
1008	29.7	6.3	10.3	chr1	80243706	80244305	(168712117)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	22	146921
2632	10.4	0.0	0.0	chr1	80648856	80649210	(168307212)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	147459
27	25.2	0.0	3.6	chr1	80864273	80864290	(168092132)	+	(TA)n	Simple_repeat	2	19	(0)	147690
1775	13.8	6.6	1.7	chr1	80864291	80864651	(168091771)	+	THE1D	LTR/ERVL-MaLR	2	381	(0)	147691
27	25.2	0.0	3.6	chr1	80864652	80864680	(168091742)	+	(TA)n	Simple_repeat	2	29	(0)	147692
1712	21.4	2.9	0.3	chr1	80864691	80865028	(168091394)	C	MLT2C1	LTR/ERVL	(50)	347	1	147693
204	39.0	3.1	9.4	chr1	81358880	81359049	(167597373)	C	L2b	LINE/L2	(203)	3172	3014	148342
18	17.7	0.0	0.0	chr1	81359075	81359106	(167597316)	+	A-rich	Low_complexity	1	32	(0)	148343
20	33.8	1.2	0.0	chr1	81427379	81427460	(167528962)	+	(GGT)n	Simple_repeat	1	83	(0)	148432
2381	10.0	1.1	2.2	chr1	81786876	81787234	(167169188)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	149016
13591	14.1	5.3	1.0	chr1	83019440	83021751	(165934671)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1	150629
145	34.3	1.4	1.7	chr1	83021752	83021795	(165934627)	+	(TA)n	Simple_repeat	1	44	(0)	150630
7138	18.9	8.4	4.5	chr1	83581816	83582881	(165373541)	C	MER52A	LTR/ERV1	(0)	1755	721	151348
2389	10.0	1.1	3.0	chr1	83582882	83583243	(165373179)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	151349
7138	18.9	8.4	4.5	chr1	83583244	83583858	(165372564)	C	MER52A	LTR/ERV1	(1035)	720	1	151348
2153	17.8	6.5	8.3	chr1	83985001	83985565	(164970857)	C	MLT2B3	LTR/ERVL	(0)	554	1	151913
7148	17.6	4.5	4.9	chr1	84021332	84021854	(164934568)	C	MER4-int	LTR/ERV1	(2)	6596	6058	151964
2421	9.9	0.8	0.8	chr1	84021855	84022209	(164934213)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	151965
7148	17.6	4.5	4.9	chr1	84022210	84023436	(164932986)	C	MER4-int	LTR/ERV1	(541)	6057	4854	151964
37	15.9	0.0	0.0	chr1	84078068	84078133	(164878289)	+	(CCG)n	Simple_repeat	1	66	(0)	152037
675	24.9	6.0	0.8	chr1	84365694	84365928	(164590494)	C	Tigger15a	DNA/TcMar-Tigger	(93)	622	375	152406
210	16.3	0.0	8.5	chr1	84366108	84366154	(164590268)	C	MIRc	SINE/MIR	(194)	74	32	152407
20	15.7	7.9	3.7	chr1	84505927	84506006	(164450416)	+	(CCCG)n	Simple_repeat	1	83	(0)	152615
22012	15.1	3.6	2.5	chr1	84607284	84610701	(164345721)	+	LTR25-int	LTR/ERV1	3008	6573	(615)	152787
2113	13.0	7.1	3.1	chr1	84610702	84611050	(164345372)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	152790
22012	14.0	3.4	2.3	chr1	84611051	84611675	(164344747)	+	LTR25-int	LTR/ERV1	6574	7187	(1)	152787
18	19.6	0.0	4.0	chr1	84621094	84621143	(164335279)	+	G-rich	Low_complexity	1	50	(0)	152806
29	0.0	0.0	0.0	chr1	84621265	84621289	(164335133)	+	(TG)n	Simple_repeat	1	25	(0)	152807
335	30.4	5.8	2.0	chr1	84633010	84633157	(164323265)	+	L2c	LINE/L2	2709	2862	(557)	152830
228	20.4	0.0	0.0	chr1	84633294	84633337	(164323085)	+	L2c	LINE/L2	3086	3129	(258)	152830
219	23.9	0.0	0.0	chr1	84633465	84633510	(164322912)	+	L2c	LINE/L2	3376	3421	(5)	152830
2005	13.6	1.3	2.0	chr1	84633637	84633938	(164322484)	C	AluJb	SINE/Alu	(12)	300	1	152831
22	14.0	2.0	2.0	chr1	84997144	84997198	(163959224)	+	(CGCCC)n	Simple_repeat	1	55	(0)	153435
266	29.6	13.4	0.8	chr1	85109078	85109312	(163847110)	C	Tigger16a	DNA/TcMar-Tigger	(208)	749	481	153621
265	24.0	1.0	5.7	chr1	85109670	85109775	(163846647)	+	Charlie16a	DNA/hAT-Charlie	83	183	(159)	153622
21	29.4	0.0	0.0	chr1	85201169	85201234	(163755188)	+	(TCG)n	Simple_repeat	1	66	(0)	153784
17	11.3	0.0	0.0	chr1	85201664	85201692	(163754730)	+	(GCG)n	Simple_repeat	1	29	(0)	153785
16	12.8	9.4	1.7	chr1	85201785	85201837	(163754585)	+	G-rich	Low_complexity	1	58	(0)	153786
17	10.4	0.0	3.0	chr1	85276551	85276583	(163679839)	+	(CGACG)n	Simple_repeat	1	33	(0)	153916
12	16.3	2.8	2.7	chr1	85276616	85276651	(163679771)	+	(AGGCGC)n	Simple_repeat	1	37	(0)	153917
23	11.1	0.0	0.0	chr1	85576952	85576990	(163379432)	+	(ACCGCC)n	Simple_repeat	1	39	(0)	154399
16	18.3	3.8	3.6	chr1	85577104	85577156	(163379266)	+	G-rich	Low_complexity	1	55	(0)	154400
5081	12.5	20.9	1.6	chr1	85714229	85715222	(163241200)	C	MER11B	LTR/ERVK	(0)	1236	1	154628
2105	11.2	12.3	0.0	chr1	86409350	86409662	(162546760)	C	LTR18A	LTR/ERVL	(0)	357	1	155563
15089	16.1	1.1	0.4	chr1	86409664	86414606	(162541816)	C	HERVL18-int	LTR/ERVL	(0)	6047	971	155563
20	7.7	15.3	2.4	chr1	87328746	87328817	(161627605)	+	(GAGC)n	Simple_repeat	1	83	(0)	156907
21	29.0	2.6	3.1	chr1	87328818	87328847	(161627575)	+	G-rich	Low_complexity	3	103	(0)	156908
14	9.9	2.8	5.4	chr1	87328906	87328941	(161627481)	+	(CGCCG)n	Simple_repeat	1	37	(0)	156909
1920	20.7	1.4	0.0	chr1	89335548	89335896	(159620526)	+	L1M1	LINE/L1	1535	1863	(5702)	159742
265	18.0	0.0	3.9	chr1	89335897	89335948	(159620474)	C	LTR28B	LTR/ERV1	(0)	974	925	159743
2738	8.9	1.7	0.0	chr1	89335949	89336297	(159620125)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	159744
12396	9.5	0.3	0.6	chr1	89336298	89337882	(159618540)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	159744
28	6.1	0.0	0.0	chr1	89524685	89524719	(159431703)	+	(CCT)n	Simple_repeat	1	35	(0)	159966
15	10.3	9.1	2.1	chr1	89524730	89524791	(159431631)	+	(CCGCCT)n	Simple_repeat	1	66	(0)	159967
398	28.8	11.2	3.9	chr1	89991200	89991443	(158964979)	C	L2c	LINE/L2	(224)	3163	2912	160683
396	30.6	6.2	5.1	chr1	89991545	89991878	(158964544)	C	L2c	LINE/L2	(661)	2758	2421	160683
2591	9.0	0.3	0.6	chr1	90583062	90583417	(158373005)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	161486
203	37.9	6.9	1.0	chr1	90583422	90583626	(158372796)	C	L2c	LINE/L2	(251)	3136	2919	161487
49	3.9	0.0	0.0	chr1	90717525	90717577	(158238845)	+	(AGGCGA)n	Simple_repeat	1	53	(0)	161673
15	4.8	0.0	0.0	chr1	90717596	90717617	(158238805)	+	(GCC)n	Simple_repeat	1	22	(0)	161674
17	28.7	1.6	0.0	chr1	90717642	90717704	(158238718)	+	(GGCGGC)n	Simple_repeat	1	64	(0)	161675
28	22.0	0.0	0.0	chr1	90717832	90717894	(158238528)	+	GA-rich	Low_complexity	1	63	(0)	161676
23	15.2	6.7	5.3	chr1	90717998	90718003	(158238419)	+	(CCGCGC)n	Simple_repeat	1	10	(85)	161677
12	17.6	7.7	0.0	chr1	90718004	90718042	(158238380)	+	(CCAGCG)n	Simple_repeat	1	42	(0)	161678
23	15.2	6.7	5.3	chr1	90718043	90718086	(158238336)	+	(CCGCGC)n	Simple_repeat	11	95	(0)	161677
953	22.1	11.7	1.9	chr1	91310122	91310430	(157645992)	+	L1MC5	LINE/L1	8952	9294	(10)	162556
2728	7.6	0.0	0.8	chr1	91310549	91310906	(157645516)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	162557
11750	9.1	0.2	1.1	chr1	91310907	91311370	(157645052)	+	THE1A-int	LTR/ERVL-MaLR	1	464	(1116)	162557
11750	9.1	0.2	1.1	chr1	91311640	91312768	(157643654)	+	THE1A-int	LTR/ERVL-MaLR	465	1580	(0)	162557
2721	8.5	0.3	0.0	chr1	91312769	91313122	(157643300)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	162557
2230	13.3	2.2	1.0	chr1	91492975	91493369	(157463053)	+	L1MB3	LINE/L1	5781	6180	(3)	162791
359	31.4	11.6	3.3	chr1	91493409	91493486	(157462936)	+	MIRb	SINE/MIR	37	116	(152)	162794
1886	16.3	0.7	1.4	chr1	91493487	91493781	(157462641)	C	AluJb	SINE/Alu	(19)	293	1	162795
2293	10.0	0.8	4.4	chr1	91641443	91641747	(157314675)	+	THE1A	LTR/ERVL-MaLR	1	304	(51)	163032
2170	10.4	0.0	5.1	chr1	91641748	91642063	(157314359)	+	AluSc	SINE/Alu	2	301	(8)	163033
13	11.1	9.3	5.1	chr1	91885645	91885698	(157070724)	+	(CTGCCCCG)n	Simple_repeat	1	59	(0)	163408
17	20.1	0.0	0.0	chr1	91886295	91886334	(157070088)	+	(CCCCCTC)n	Simple_repeat	1	40	(0)	163409
17	17.2	0.0	7.5	chr1	91886335	91886345	(157070077)	+	(CTC)n	Simple_repeat	3	53	(0)	163410
14	8.1	0.0	6.7	chr1	92784627	92784656	(156171766)	+	(GGC)n	Simple_repeat	1	30	(0)	165065
15	11.2	0.0	3.2	chr1	92784787	92784821	(156171601)	+	(CCGC)n	Simple_repeat	1	33	(0)	165066
2018	24.0	5.0	3.4	chr1	92805463	92805688	(156150734)	C	L2	LINE/L2	(1410)	2009	1775	165124
2734	8.8	0.3	0.0	chr1	92805689	92806042	(156150380)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	165129
2018	24.0	5.0	3.4	chr1	92806043	92806402	(156150020)	C	L2	LINE/L2	(1645)	1774	1413	165124
27	0.0	0.0	0.0	chr1	93346087	93346112	(155610310)	+	(GCAGCG)n	Simple_repeat	1	26	(0)	166155
23	15.9	2.0	1.9	chr1	93346157	93346207	(155610215)	+	(GGC)n	Simple_repeat	1	52	(0)	166156
716	32.7	5.4	3.9	chr1	93854893	93855407	(155101015)	C	L2	LINE/L2	(478)	2941	2419	166942
270	22.7	0.0	4.3	chr1	93855406	93855474	(155100948)	+	L2a	LINE/L2	3361	3426	(0)	166943
339	24.8	7.2	0.8	chr1	93855526	93855643	(155100779)	C	L2	LINE/L2	(1036)	2383	2258	166942
598	15.1	0.0	0.0	chr1	93855646	93855731	(155100691)	+	AluSx	SINE/Alu	1	86	(226)	166944
26402	5.0	0.4	0.2	chr1	93855733	93861872	(155094550)	+	L1PA4	LINE/L1	2	6155	(0)	166945
15	12.2	0.0	0.0	chr1	93909201	93909227	(155047195)	+	(GCGG)n	Simple_repeat	1	27	(0)	167023
18	30.7	1.3	2.5	chr1	93909334	93909412	(155047010)	+	(CGG)n	Simple_repeat	1	80	(0)	167024
2638	8.0	1.4	0.8	chr1	94686426	94686778	(154269644)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	168137
40	12.8	3.9	0.0	chr1	94820301	94820377	(154136045)	+	(GCCCCG)n	Simple_repeat	1	80	(0)	168365
17	18.9	2.9	7.0	chr1	96721667	96721735	(152234687)	+	(CGC)n	Simple_repeat	1	71	(0)	171072
2480	9.4	0.8	0.8	chr1	96848000	96848354	(152108068)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	171258
1832	16.1	4.1	6.0	chr1	97654749	97655118	(151301304)	C	THE1B	LTR/ERVL-MaLR	(1)	363	1	172340
13	7.4	3.1	6.1	chr1	98661688	98661719	(150294703)	+	(GGC)n	Simple_repeat	1	33	(0)	173753
16	8.3	0.0	0.0	chr1	99004681	99004706	(149951716)	+	(CCGAG)n	Simple_repeat	1	26	(0)	174243
12	20.6	8.0	0.0	chr1	99004889	99004938	(149951484)	+	(GCCCCCT)n	Simple_repeat	1	54	(0)	174244
12	19.1	5.9	3.7	chr1	99005053	99005103	(149951319)	+	(CGG)n	Simple_repeat	1	54	(0)	174245
187	38.8	2.9	2.2	chr1	99088063	99088199	(149868223)	C	L2	LINE/L2	(439)	2980	2843	174363
2143	13.7	6.9	1.5	chr1	99088247	99088586	(149867836)	+	THE1B	LTR/ERVL-MaLR	1	360	(4)	174364
13	5.3	0.0	0.0	chr1	99970237	99970256	(148986166)	+	(GGA)n	Simple_repeat	1	20	(0)	175723
14	18.3	5.7	3.6	chr1	100539548	100539600	(148416822)	+	(GCT)n	Simple_repeat	1	56	(0)	176730
10122	11.2	8.2	0.5	chr1	100889425	100890927	(148065495)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	177175
2200	25.5	6.2	5.0	chr1	100984107	100985363	(147971059)	+	L1ME1	LINE/L1	421	1693	(4947)	177303
1092	33.2	12.7	2.4	chr1	101330522	101331052	(147625370)	C	L2b	LINE/L2	(201)	3174	2548	177889
2248	12.2	12.2	0.5	chr1	101331053	101331430	(147624992)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	177894
1092	32.5	15.0	2.2	chr1	101331431	101332303	(147624119)	C	L2b	LINE/L2	(872)	2547	1576	177889
25	24.6	0.0	0.0	chr1	101996930	101996989	(146959433)	+	(AGC)n	Simple_repeat	1	60	(0)	178764
2830	25.3	3.9	3.9	chr1	102430979	102431245	(146525177)	+	L1M4	LINE/L1	1115	1376	(6244)	179298
1735	17.1	7.6	1.7	chr1	102431246	102431603	(146524819)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	179302
2221	13.7	1.9	1.9	chr1	106429235	106429598	(142526824)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	184023
2388	8.8	3.4	0.6	chr1	106697984	106698328	(142258094)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	184378
24	12.2	3.4	4.9	chr1	107964917	107964975	(140991447)	+	(GCC)n	Simple_repeat	1	61	(0)	186143
311	33.9	4.1	10.7	chr1	108130706	108130966	(140825456)	+	MamGyp-int	LTR/Gypsy	504	746	(4357)	186413
559	21.7	22.7	3.1	chr1	108130988	108131311	(140825111)	+	L2a	LINE/L2	2961	3366	(60)	186414
2953	7.1	0.3	0.0	chr1	108131325	108131678	(140824744)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	186415
12373	9.0	1.1	0.2	chr1	108131679	108133244	(140823178)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	186415
445	23.2	1.9	1.5	chr1	108963593	108963725	(139992697)	C	Charlie15b	DNA/hAT-Charlie	(16)	1045	926	187650
2223	11.2	0.3	0.6	chr1	109100807	109101119	(139855303)	C	AluJb	SINE/Alu	(0)	312	1	187986
35	8.8	0.0	0.0	chr1	109910719	109910766	(139045656)	+	(GT)n	Simple_repeat	1	48	(0)	189268
19	3.5	3.5	0.0	chr1	109910958	109910986	(139045436)	+	(AGCG)n	Simple_repeat	1	30	(0)	189269
13	13.1	0.0	0.0	chr1	110674560	110674584	(138281838)	+	(CGC)n	Simple_repeat	1	25	(0)	190556
13	25.9	0.0	8.6	chr1	110674722	110674802	(138281620)	+	G-rich	Low_complexity	1	81	(0)	190557
12	4.7	4.5	0.0	chr1	111619749	111619770	(137336652)	+	(GCGT)n	Simple_repeat	1	23	(0)	191803
22	24.0	0.0	0.0	chr1	111619785	111619838	(137336584)	+	(CGC)n	Simple_repeat	1	54	(0)	191804
43	2.3	0.0	0.0	chr1	111619876	111619919	(137336503)	+	(GGAGGAGGT)n	Simple_repeat	1	44	(0)	191805
14	26.4	4.6	1.5	chr1	111989950	111990014	(136966408)	+	G-rich	Low_complexity	1	68	(0)	192419
25	12.6	0.0	0.0	chr1	111990189	111990231	(136966191)	+	(GTGT)n	Simple_repeat	1	43	(0)	192420
14	31.8	4.0	0.0	chr1	111990232	111990262	(136966160)	+	G-rich	Low_complexity	1	77	(0)	192421
123	0.0	0.9	0.0	chr1	112706431	112706538	(136249884)	+	(AC)n	Simple_repeat	1	109	(0)	193619
15	26.3	0.0	0.0	chr1	112956340	112956376	(136000046)	+	(CG)n	Simple_repeat	1	37	(0)	194126
320	26.3	7.7	0.7	chr1	112956706	112956908	(135999514)	+	MIR	SINE/MIR	17	237	(31)	194127
17753	12.7	2.8	2.4	chr1	113716650	113717565	(135238857)	+	L1M1	LINE/L1	2842	3749	(3816)	195390
2831	5.7	0.3	0.8	chr1	113717566	113717922	(135238500)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	195393
11448	9.1	1.6	0.6	chr1	113719303	113719799	(135236623)	C	THE1A-int	LTR/ERVL-MaLR	(1082)	498	1	195393
2689	7.8	2.0	0.0	chr1	113719800	113720147	(135236275)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	195393
3549	13.5	3.0	1.5	chr1	113720148	113720592	(135235830)	+	L1M1	LINE/L1	3750	4204	(3361)	195390
2321	11.2	1.7	0.9	chr1	114019091	114019440	(134936982)	+	THE1A	LTR/ERVL-MaLR	3	355	(0)	195944
11708	9.9	0.6	0.3	chr1	114019441	114021015	(134935407)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	195944
2157	12.3	0.3	0.3	chr1	114616573	114616864	(134339558)	+	AluSq2	SINE/Alu	1	292	(21)	196972
2611	7.7	0.6	3.3	chr1	114616865	114617185	(134339237)	C	THE1A	LTR/ERVL-MaLR	(40)	315	2	196971
1806	16.3	3.6	0.7	chr1	115080280	115080574	(133875848)	C	AluJb	SINE/Alu	(8)	304	1	197657
510	23.8	10.1	0.0	chr1	115394231	115394436	(133561986)	+	L1MC5	LINE/L1	7672	7900	(1404)	198113
2637	9.0	0.3	0.3	chr1	115394437	115394791	(133561631)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	198116
638	28.2	13.7	5.5	chr1	115433056	115433088	(133523334)	C	L2a	LINE/L2	(0)	3426	3395	198163
2328	11.9	0.8	0.8	chr1	115433089	115433443	(133522979)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	198164
638	28.2	13.7	5.5	chr1	115433444	115433788	(133522634)	C	L2a	LINE/L2	(32)	3394	3012	198163
2770	7.1	0.6	0.0	chr1	115539980	115540332	(133416090)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	198335
3673	16.8	0.7	1.1	chr1	115563569	115564315	(133392107)	+	L1MA4A	LINE/L1	3860	4603	(2959)	198376
25	16.9	0.0	0.0	chr1	115564394	115564441	(133391981)	+	(CGC)n	Simple_repeat	1	48	(0)	198380
12	27.4	2.0	2.0	chr1	115641680	115641729	(133314693)	+	(GTGT)n	Simple_repeat	1	51	(0)	198479
14	23.5	4.3	4.1	chr1	115641866	115641935	(133314487)	+	(GGCTG)n	Simple_repeat	1	73	(0)	198480
15	26.0	3.3	1.6	chr1	115641931	115641991	(133314431)	+	(GGCAGC)n	Simple_repeat	1	63	(0)	198481
13	4.8	4.5	0.0	chr1	115641973	115641994	(133314428)	+	(GCG)n	Simple_repeat	1	23	(0)	198482
13	22.3	4.3	5.5	chr1	115642016	115642085	(133314337)	+	(CGCGGAC)n	Simple_repeat	1	73	(0)	198483
12	28.0	2.3	0.0	chr1	116373364	116373407	(132583015)	+	(CCTC)n	Simple_repeat	1	45	(0)	199614
38	4.2	0.0	3.8	chr1	116667517	116667569	(132288853)	+	(CCCGCTC)n	Simple_repeat	1	53	(0)	200066
12	28.6	0.0	6.9	chr1	116667571	116667642	(132288780)	+	(CCCCCG)n	Simple_repeat	1	72	(0)	200067
201	29.6	14.8	2.2	chr1	116909379	116909513	(132046909)	+	MIR3	SINE/MIR	30	184	(24)	200485
19	12.6	4.4	2.1	chr1	116909989	116910033	(132046389)	+	GA-rich	Low_complexity	1	47	(0)	200486
29	27.9	0.9	3.6	chr1	116910072	116910182	(132046240)	+	GA-rich	Low_complexity	1	112	(0)	200486
643	27.0	9.4	3.9	chr1	117157167	117157305	(131799117)	+	MIRc	SINE/MIR	21	172	(96)	200843
2570	9.1	1.1	0.6	chr1	117157306	117157658	(131798764)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	200844
45	2.3	0.0	0.0	chr1	117367314	117367358	(131589064)	+	(GAG)n	Simple_repeat	1	45	(0)	201206
14	4.7	0.0	4.2	chr1	117367469	117367492	(131588930)	+	(GCG)n	Simple_repeat	1	24	(0)	201207
5998	17.5	4.4	5.0	chr1	118724018	118724507	(130231915)	+	L1MB1	LINE/L1	4559	5016	(2084)	203080
2417	10.8	0.8	0.6	chr1	118724508	118724861	(130231561)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	203083
5998	17.5	4.4	5.0	chr1	118724862	118725086	(130231336)	+	L1MB1	LINE/L1	5017	5240	(1860)	203080
405	26.8	0.0	6.1	chr1	119062397	119062527	(129893895)	+	Charlie7a	DNA/hAT-Charlie	1	123	(149)	203552
2633	8.2	0.8	0.0	chr1	119062546	119062897	(129893525)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	203553
11906	8.1	0.4	1.0	chr1	119062898	119064486	(129891936)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	203553
13	35.2	0.0	3.9	chr1	121396747	121396824	(127559598)	+	(CGC)n	Simple_repeat	1	78	(0)	207015
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
22	22.9	0.0	0.0	chr1	144412465	144412510	(104543912)	+	G-rich	Low_complexity	1	46	(0)	209361
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1290	7.3	0.0	0.6	chr1	144551779	144551943	(104404479)	C	U1	snRNA	(1)	164	1	209607
1085	18.0	9.0	1.0	chr1	145760156	145760349	(103196073)	+	AluJr4	SINE/Alu	1	211	(101)	211475
2833	6.0	1.7	0.0	chr1	145760385	145760733	(103195689)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	211476
11825	9.4	0.9	0.1	chr1	145760734	145762300	(103194122)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	211476
13	16.9	0.0	0.0	chr1	145823942	145823968	(103132454)	+	(GCC)n	Simple_repeat	1	27	(0)	211601
26	23.2	1.4	1.4	chr1	147600187	147600258	(101356164)	+	(CGC)n	Simple_repeat	1	73	(0)	214369
1173	17.9	1.8	6.4	chr1	147661137	147661371	(101295051)	C	AluSx3	SINE/Alu	(15)	296	73	214443
3132	12.5	1.1	0.0	chr1	147661373	147661819	(101294603)	+	Tigger1	DNA/TcMar-Tigger	223	674	(1744)	214444
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
2228	8.9	0.3	0.0	chr1	148335176	148335467	(100620955)	C	AluSx	SINE/Alu	(19)	293	1	215517
24	15.6	1.1	0.0	chr1	148522481	148522534	(100433888)	+	G-rich	Low_complexity	1	54	(0)	215837
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
13	9.8	0.0	0.0	chr1	148679544	148679565	(100276857)	+	(CGC)n	Simple_repeat	1	22	(0)	216042
18	21.8	4.5	2.9	chr1	148679790	148679856	(100276566)	+	(CCG)n	Simple_repeat	1	70	(0)	216043
15	19.8	8.6	0.0	chr1	149390631	149390688	(99565734)	+	(GGCGGA)n	Simple_repeat	1	63	(0)	217149
34	5.2	0.0	0.0	chr1	149390803	149390842	(99565580)	+	(GGC)n	Simple_repeat	1	40	(0)	217150
28	0.0	0.0	0.0	chr1	150364656	150364681	(98591741)	+	(CCG)n	Simple_repeat	1	26	(0)	218877
12	9.2	0.0	4.0	chr1	150364717	150364741	(98591681)	+	(GGC)n	Simple_repeat	1	25	(0)	218878
2263	3.8	2.4	3.4	chr1	150515965	150516257	(98440165)	+	AluSg7	SINE/Alu	1	290	(19)	219233
2127	13.2	0.3	1.0	chr1	150654225	150654534	(98301888)	+	AluSx1	SINE/Alu	1	308	(4)	219551
802	18.1	6.1	8.7	chr1	150654535	150654576	(98301846)	+	L1MB4	LINE/L1	1098	1142	(5242)	219548
656	4.0	0.0	0.0	chr1	150654577	150654652	(98301770)	+	HERVK9-int	LTR/ERVK	505	580	(5441)	219552
38470	5.1	0.3	0.1	chr1	150654651	150659225	(98297197)	+	HERVK9-int	LTR/ERVK	1436	6020	(1)	219552
11	19.4	5.3	7.6	chr1	150974454	150974528	(97981894)	+	(CGCCTCC)n	Simple_repeat	1	79	(0)	220231
28	16.0	2.6	5.1	chr1	150974727	150974803	(97981619)	+	(CCG)n	Simple_repeat	1	79	(0)	220232
16	13.2	0.0	2.9	chr1	150974800	150974834	(97981588)	+	(GCCGA)n	Simple_repeat	1	35	(0)	220233
2451	7.4	0.0	0.3	chr1	151398958	151399266	(97557156)	+	AluSx1	SINE/Alu	1	308	(4)	221139
12	27.2	2.3	0.0	chr1	151993623	151993666	(96962756)	+	(CCCGC)n	Simple_repeat	1	45	(0)	222236
13	28.8	0.0	0.0	chr1	152110928	152110973	(96845449)	+	(CTGCTC)n	Simple_repeat	1	46	(0)	222409
9281	13.2	4.8	1.4	chr1	153158075	153159596	(95796826)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	4	223668
306	25.9	7.5	4.9	chr1	153260557	153260698	(95695724)	C	MIR3	SINE/MIR	(3)	205	60	223825
13	13.1	0.0	0.0	chr1	153922689	153922713	(95033709)	+	(CGGG)n	Simple_repeat	1	25	(0)	225074
14	15.6	5.6	0.0	chr1	153922834	153922892	(95033530)	+	G-rich	Low_complexity	1	62	(0)	225075
23	15.5	0.0	0.0	chr1	153922913	153922955	(95033467)	+	(CGG)n	Simple_repeat	1	43	(0)	225076
12	17.5	3.1	0.0	chr1	153958498	153958529	(94997893)	+	(CTCC)n	Simple_repeat	1	33	(0)	225133
16	24.8	0.0	3.6	chr1	153958537	153958592	(94997830)	+	(GCCGCC)n	Simple_repeat	1	56	(0)	225134
206	34.9	11.2	2.9	chr1	154975389	154975559	(93980863)	C	L2c	LINE/L2	(16)	3371	3185	227129
1446	12.3	2.9	2.1	chr1	154975848	154976087	(93980335)	+	L1PREC2	LINE/L1	5908	6149	(11)	227130
500	19.5	2.3	3.0	chr1	155140262	155140393	(93816029)	+	L1M1	LINE/L1	325	455	(7110)	227424
321	27.7	3.1	1.1	chr1	155141655	155141749	(93814673)	C	MER90a	LTR/ERV1	(28)	586	490	227428
2555	8.3	1.7	0.0	chr1	155141770	155142118	(93814304)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	227429
623	19.6	0.0	0.0	chr1	155142167	155142278	(93814144)	C	FLAM_A	SINE/Alu	(11)	131	20	227430
822	23.3	10.8	4.8	chr1	155142279	155142589	(93813833)	C	LTR65	LTR/ERV1	(171)	498	167	227431
20	22.8	1.8	0.0	chr1	155208685	155208740	(93747682)	+	(CCCCGC)n	Simple_repeat	1	57	(0)	227541
12	21.8	2.7	0.0	chr1	155209171	155209207	(93747215)	+	G-rich	Low_complexity	1	38	(0)	227542
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
12	23.3	0.0	0.0	chr1	155562151	155562185	(93394237)	+	(ACCGAG)n	Simple_repeat	1	35	(0)	228299
32	13.5	0.0	3.2	chr1	155562416	155562477	(93393945)	+	(GGC)n	Simple_repeat	1	62	(0)	228300
27	5.6	0.0	2.6	chr1	155562800	155562838	(93393584)	+	(CCT)n	Simple_repeat	1	39	(0)	228301
18	31.1	1.2	2.3	chr1	155562840	155562848	(93393574)	+	(CCCCCG)n	Simple_repeat	1	22	(65)	228302
23	17.6	0.0	3.6	chr1	155562849	155562903	(93393519)	+	(CCG)n	Simple_repeat	1	55	(0)	228303
18	31.1	1.2	2.3	chr1	155562904	155562925	(93393497)	+	(CCCCCG)n	Simple_repeat	23	87	(0)	228302
14	16.7	0.0	5.3	chr1	155688320	155688357	(93268065)	+	(GGC)n	Simple_repeat	1	38	(0)	228557
16	13.3	0.0	5.4	chr1	155688680	155688722	(93267700)	+	(CCT)n	Simple_repeat	1	40	(0)	228558
13	16.3	0.0	5.3	chr1	157045603	157045640	(91910782)	+	G-rich	Low_complexity	1	38	(0)	231176
19	26.6	0.0	0.0	chr1	157045824	157045877	(91910545)	+	(CCTC)n	Simple_repeat	1	54	(0)	231177
23	16.0	3.5	1.7	chr1	157046168	157046260	(91910162)	+	(CCGCCA)n	Simple_repeat	1	94	(0)	231178
686	25.0	14.7	1.4	chr1	157253050	157253272	(91703150)	+	LTR78	LTR/ERV1	81	338	(966)	231500
371	30.7	7.0	4.5	chr1	157253417	157253638	(91702784)	+	LTR78	LTR/ERV1	641	868	(436)	231500
1803	10.4	2.0	13.1	chr1	160434120	160434463	(88521959)	C	THE1C-int	LTR/ERVL-MaLR	(1324)	307	3	235746
2246	14.4	3.5	1.1	chr1	160434466	160434831	(88521591)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	235746
368	31.0	8.7	6.8	chr1	160434850	160434945	(88521477)	+	MamGypsy2-I	LTR/Gypsy	982	1087	(3079)	235741
29628	9.7	3.2	1.9	chr1	160919691	160920543	(88035879)	C	MER57-int	LTR/ERV1	(3107)	4430	3575	236466
2141	16.6	3.9	0.6	chr1	160920544	160920895	(88035527)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	236473
11439	10.0	1.1	0.5	chr1	160920896	160921391	(88035031)	+	THE1B-int	LTR/ERVL-MaLR	1	496	(1084)	236473
642	0.0	0.0	0.0	chr1	161422093	161422164	(87534258)	C	tRNA-Glu-GAA	tRNA	(3)	72	1	237515
6644	8.0	2.8	2.5	chr1	161422259	161424316	(87532106)	+	SVA_D	Retroposon/SVA	14	1386	(0)	237516
18	25.5	2.3	5.6	chr1	161440260	161440347	(87516075)	+	(CCCG)n	Simple_repeat	1	90	(0)	237537
662	1.3	0.0	0.0	chr1	161440822	161440896	(87515526)	C	tRNA-Asp-GAY	tRNA	(0)	75	1	237538
12	25.3	5.2	1.6	chr1	161513947	161514004	(87442418)	+	(CCTTCTC)n	Simple_repeat	1	61	(0)	237651
1307	26.7	1.8	8.2	chr1	161514005	161514469	(87441953)	+	MER57F	LTR/ERV1	1	435	(0)	237652
503	10.0	0.0	0.0	chr1	161612718	161612787	(87343635)	+	tRNA-Gly-GGA	tRNA	1	70	(5)	237810
12	10.0	0.0	0.0	chr1	161612969	161612990	(87343432)	+	(TTCC)n	Simple_repeat	1	22	(0)	237811
205	32.6	2.3	2.3	chr1	161750401	161750488	(87205934)	C	L2c	LINE/L2	(62)	3325	3238	238034
29	0.0	0.0	0.0	chr1	162069751	162069777	(86886645)	+	(CCGCCA)n	Simple_repeat	1	27	(0)	238552
2675	8.3	0.3	0.0	chr1	163108535	163108885	(85847537)	C	THE1A	LTR/ERVL-MaLR	(1)	354	3	240255
22	28.4	0.0	0.0	chr1	165445150	165445208	(83511214)	+	(GCC)n	Simple_repeat	1	59	(0)	243640
378	31.6	5.4	0.9	chr1	165769569	165769831	(83186591)	C	MER102b	DNA/hAT-Charlie	(1)	330	84	244265
14	6.9	0.0	10.5	chr1	165827486	165827523	(83128899)	+	G-rich	Low_complexity	1	38	(0)	244381
22	19.5	0.0	0.0	chr1	166166688	166166734	(82789688)	+	(GCC)n	Simple_repeat	1	47	(0)	244900
19	17.7	0.0	6.9	chr1	166166779	166166836	(82789586)	+	(GCG)n	Simple_repeat	1	58	(0)	244901
2267	14.9	1.7	0.6	chr1	166831527	166831877	(82124545)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	245762
5809	10.8	2.2	2.7	chr1	166831878	166832135	(82124287)	+	MER4D0	LTR/ERV1	618	869	(3)	245761
15	13.2	4.4	4.3	chr1	166839901	166839945	(82116477)	+	G-rich	Low_complexity	1	47	(0)	245776
1829	15.3	3.5	4.9	chr1	167597086	167597154	(81359268)	C	MER2B	DNA/TcMar-Tigger	(1)	335	272	246963
2559	9.2	1.7	0.0	chr1	167597155	167597503	(81358919)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	246964
448	34.1	6.5	7.1	chr1	167861410	167861739	(81094683)	+	L2c	LINE/L2	2934	3264	(123)	247448
2146	12.5	5.8	1.1	chr1	167861740	167862102	(81094320)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	247449
308	22.4	12.7	14.3	chr1	167936971	167937179	(81019243)	C	L1MDb	LINE/L1	(5653)	756	552	247570
1373	25.2	18.4	3.2	chr1	168039892	168040547	(80915875)	C	L2a	LINE/L2	(15)	3411	2613	247709
189	31.2	0.0	0.0	chr1	168432630	168432677	(80523745)	C	MIR1_Amn	SINE/MIR	(145)	85	38	248396
2117	12.1	0.0	3.3	chr1	168432726	168433030	(80523392)	C	AluSz	SINE/Alu	(17)	295	1	248397
2075	15.3	2.2	0.6	chr1	168642832	168643180	(80313242)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	248697
28	3.0	2.9	0.0	chr1	169106609	169106642	(79849780)	+	(CCG)n	Simple_repeat	1	35	(0)	249449
794	20.0	18.4	17.5	chr1	169227400	169227817	(79728605)	C	MLT1A	LTR/ERVL-MaLR	(0)	428	6	249663
15	0.0	0.0	4.3	chr1	169485720	169485742	(79470680)	+	(GCC)n	Simple_repeat	1	23	(0)	250009
1688	4.9	0.0	3.5	chr1	169550129	169550359	(79406063)	C	L1PA5	LINE/L1	(0)	6154	5932	250097
24	29.0	2.5	1.2	chr1	170664065	170664144	(78292278)	+	(CT)n	Simple_repeat	1	82	(0)	251608
26	19.9	3.1	5.9	chr1	170664145	170664157	(78292265)	+	(CCCT)n	Simple_repeat	6	101	(0)	251609
14	28.5	3.1	1.5	chr1	171841146	171841210	(77115212)	+	(GGTGCT)n	Simple_repeat	1	67	(0)	253434
18	12.1	0.0	5.0	chr1	171841403	171841442	(77114980)	+	G-rich	Low_complexity	1	40	(0)	253435
14	16.1	0.0	0.0	chr1	174022262	174022289	(74934133)	+	(CTG)n	Simple_repeat	1	28	(0)	256537
24	24.9	0.0	1.5	chr1	174022311	174022378	(74934044)	+	(CCT)n	Simple_repeat	1	68	(0)	256538
12	27.6	0.0	0.0	chr1	174022435	174022473	(74933949)	+	GA-rich	Low_complexity	1	39	(0)	256539
14	23.4	2.1	2.1	chr1	174159974	174160020	(74796402)	+	(TGC)n	Simple_repeat	1	48	(0)	256811
67	0.0	5.6	0.0	chr1	175030000	175030070	(73926352)	+	(AC)n	Simple_repeat	1	75	(0)	258118
2749	16.5	1.6	2.6	chr1	175030163	175030654	(73925768)	C	MER45B	DNA/hAT-Tip100	(0)	1040	554	258119
14	33.3	1.4	1.4	chr1	176207201	176207269	(72749153)	+	(CCG)n	Simple_repeat	1	70	(0)	259874
15	20.5	5.1	0.0	chr1	176207252	176207310	(72749112)	+	(GC)n	Simple_repeat	1	62	(0)	259875
332	37.8	0.7	0.0	chr1	177013436	177013586	(71942836)	C	CR1-L3A_Croc	LINE/CR1	(403)	3885	3734	261063
2273	13.5	0.6	2.2	chr1	177096500	177096869	(71859553)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	261176
14	14.2	3.2	0.0	chr1	178093445	178093475	(70862947)	+	A-rich	Low_complexity	1	32	(0)	262568
41	14.1	0.0	1.4	chr1	178093761	178093834	(70862588)	+	(GCCGCC)n	Simple_repeat	1	74	(0)	262569
14	21.1	0.0	6.1	chr1	178094013	178094061	(70862361)	+	(GGC)n	Simple_repeat	1	49	(0)	262570
14	15.8	0.0	5.1	chr1	178094065	178094103	(70862319)	+	(CCCAG)n	Simple_repeat	1	39	(0)	262571
14	19.3	6.4	0.0	chr1	178094104	178094109	(70862313)	+	(CCCCAG)n	Simple_repeat	3	50	(0)	262572
21	22.1	7.3	0.0	chr1	178725125	178725192	(70231230)	+	(CG)n	Simple_repeat	1	73	(0)	263565
22	9.4	0.0	0.0	chr1	178725259	178725292	(70231130)	+	(GCG)n	Simple_repeat	1	34	(0)	263566
17	27.9	0.0	6.1	chr1	178725437	178725450	(70230972)	+	G-rich	Low_complexity	1	18	(64)	263567
16	4.5	0.0	0.0	chr1	178725451	178725473	(70230949)	+	(GGGA)n	Simple_repeat	1	23	(0)	263568
17	27.9	0.0	6.1	chr1	178725474	178725518	(70230904)	+	G-rich	Low_complexity	19	82	(0)	263567
13	19.5	0.0	2.7	chr1	178726029	178726065	(70230357)	+	G-rich	Low_complexity	1	37	(0)	263569
2037	14.8	3.6	4.4	chr1	178974628	178974994	(69981428)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	263937
2216	27.9	11.0	5.7	chr1	178974995	178975539	(69980883)	+	L1MA4	LINE/L1	19	599	(6966)	263938
258	25.4	0.0	0.0	chr1	179586108	179586166	(69370256)	C	HAL1ME	LINE/L1	(2285)	180	122	265037
20	0.0	0.0	0.0	chr1	179586177	179586198	(69370224)	+	(A)n	Simple_repeat	1	22	(0)	265038
26	16.7	3.3	0.0	chr1	179586273	179586332	(69370090)	+	(TCGGCGC)n	Simple_repeat	1	62	(0)	265039
12	19.6	2.9	0.0	chr1	179954761	179954795	(69001627)	+	(CGCAGC)n	Simple_repeat	1	36	(0)	265605
17	21.0	6.7	2.5	chr1	180154746	180154820	(68801602)	+	G-rich	Low_complexity	1	80	(0)	265970
18	7.8	0.0	0.0	chr1	180154924	180154972	(68801450)	+	(GCT)n	Simple_repeat	1	49	(0)	265971
2734	6.8	0.8	3.6	chr1	180558769	180559133	(68397289)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	266573
2182	11.6	7.2	3.2	chr1	182329053	182329399	(66627023)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	269269
20	19.0	0.0	0.0	chr1	182329407	182329443	(66626979)	+	A-rich	Low_complexity	1	37	(0)	269270
14	11.3	3.5	0.0	chr1	183023367	183023395	(65933027)	+	(ACCCC)n	Simple_repeat	1	30	(0)	270461
21	22.2	1.3	5.3	chr1	185317244	185317318	(63639104)	+	(GCC)n	Simple_repeat	1	76	(0)	274052
18	9.3	0.0	7.3	chr1	185317384	185317424	(63638998)	+	(GCCCC)n	Simple_repeat	1	41	(0)	274053
13	18.3	0.0	3.0	chr1	185734404	185734436	(63221986)	+	(GGC)n	Simple_repeat	1	33	(0)	274707
1306	14.0	0.0	7.4	chr1	186402405	186402625	(62553797)	C	AluJo	SINE/Alu	(22)	290	86	275540
616	24.0	2.3	0.0	chr1	186402635	186402759	(62553663)	C	AluJo	SINE/Alu	(56)	256	129	275542
568	20.2	11.3	0.8	chr1	186402763	186402881	(62553541)	C	AluJr4	SINE/Alu	(179)	133	1	275543
378	32.5	5.5	0.0	chr1	186402885	186403004	(62553418)	+	MIRb	SINE/MIR	131	257	(11)	275534
10655	11.7	2.0	0.1	chr1	188775350	188776899	(60179523)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	278719
2581	10.0	0.6	0.0	chr1	188776902	188777252	(60179170)	+	THE1A	LTR/ERVL-MaLR	3	355	(0)	278719
16	25.5	0.0	3.6	chr1	193122096	193122150	(55834272)	+	GA-rich	Low_complexity	1	55	(0)	284394
16	18.3	2.1	4.2	chr1	193122142	193122188	(55834234)	+	(GGC)n	Simple_repeat	1	48	(0)	284395
2362	9.9	0.8	4.3	chr1	194011170	194011459	(54944963)	+	THE1A	LTR/ERVL-MaLR	1	292	(63)	285570
1368	16.6	16.2	0.0	chr1	194011460	194011712	(54944710)	C	AluSz	SINE/Alu	(10)	302	1	285571
2362	9.9	0.8	4.3	chr1	194011713	194011789	(54944633)	+	THE1A	LTR/ERVL-MaLR	293	355	(0)	285570
10510	12.2	0.8	1.1	chr1	194455187	194456771	(54499651)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	286151
2476	9.7	4.2	0.0	chr1	194456772	194457111	(54499311)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	286151
2429	10.8	0.6	0.3	chr1	195600933	195601286	(53355136)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	287609
230	17.9	1.8	0.0	chr1	197870908	197870963	(51085459)	C	L1M	LINE/L1	(835)	5338	5282	290480
780	17.0	5.8	7.2	chr1	197870980	197871013	(51085409)	+	L1ME3A	LINE/L1	5565	5602	(571)	290481
2227	10.7	5.1	0.9	chr1	197871014	197871353	(51085069)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	290482
11829	8.6	0.7	0.1	chr1	197871354	197872924	(51083498)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	290482
189	31.0	8.0	1.2	chr1	198422205	198422327	(50534095)	C	MIR	SINE/MIR	(61)	207	75	291193
197	32.1	10.3	4.4	chr1	200281103	200281216	(48675206)	+	L2c	LINE/L2	3029	3154	(233)	293923
2724	9.0	0.0	0.3	chr1	200281217	200281572	(48674850)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	293924
197	32.1	10.3	4.4	chr1	200281573	200281594	(48674828)	+	L2c	LINE/L2	3155	3174	(213)	293923
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
14	3.5	6.1	5.7	chr1	200669442	200669474	(48286948)	+	(GGC)n	Simple_repeat	1	35	(0)	294759
19	7.3	0.0	0.0	chr1	200669893	200669921	(48286501)	+	(GGAGC)n	Simple_repeat	1	29	(0)	294760
14	10.0	2.8	5.4	chr1	200670033	200670068	(48286354)	+	G-rich	Low_complexity	1	37	(0)	294761
27	20.2	5.2	3.0	chr1	200738767	200738862	(48217560)	+	G-rich	Low_complexity	1	101	(0)	294913
14	15.9	0.0	0.0	chr1	200738938	200738965	(48217457)	+	(GCG)n	Simple_repeat	1	28	(0)	294914
14	16.3	4.0	9.1	chr1	200739105	200739178	(48217244)	+	(GACGG)n	Simple_repeat	1	77	(0)	294915
19	23.2	6.0	2.2	chr1	200739179	200739185	(48217237)	+	(GGCGAC)n	Simple_repeat	4	87	(0)	294916
26	8.8	1.9	5.5	chr1	200739621	200739674	(48216748)	+	(GCG)n	Simple_repeat	1	55	(0)	294917
30	15.9	1.5	2.9	chr1	201023446	201023512	(47932910)	+	(GGC)n	Simple_repeat	1	68	(0)	295379
220	32.3	1.0	6.8	chr1	201170595	201170697	(47785725)	C	L2b	LINE/L2	(7)	3419	3310	295611
16	18.0	0.0	2.5	chr1	201176722	201176761	(47779661)	+	(CTGGCCT)n	Simple_repeat	1	40	(0)	295623
13	18.3	2.6	2.5	chr1	201916656	201916694	(47039728)	+	G-rich	Low_complexity	1	40	(0)	296832
15	26.2	5.1	0.0	chr1	201982924	201982982	(46973440)	+	(GGC)n	Simple_repeat	1	62	(0)	296983
2804	7.7	0.6	0.0	chr1	202037396	202037746	(46918676)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	297098
455	13.8	6.0	5.0	chr1	202624116	202625415	(46331007)	+	(GT)n	Simple_repeat	1	1378	(0)	298201
16	21.5	0.0	5.6	chr1	203305347	203305400	(45651022)	+	G-rich	Low_complexity	1	54	(0)	299385
22	23.5	7.4	3.0	chr1	204151969	204152074	(44804348)	+	(CGGCCCG)n	Simple_repeat	1	135	(11)	301083
13	8.5	0.0	3.7	chr1	204152075	204152101	(44804321)	+	(CCCCG)n	Simple_repeat	1	27	(0)	301084
22	23.5	7.4	3.0	chr1	204152102	204152108	(44804314)	+	(CGGCCCG)n	Simple_repeat	136	146	(0)	301083
202	34.1	5.0	0.8	chr1	204629184	204629316	(44327106)	+	L2c	LINE/L2	3022	3160	(227)	301928
1860	15.8	5.8	1.6	chr1	204629388	204629413	(44327009)	+	L1PA16	LINE/L1	5767	5792	(374)	301929
2363	8.5	3.7	0.3	chr1	204629414	204629756	(44326666)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	301930
1860	15.8	5.8	1.6	chr1	204629757	204630109	(44326313)	+	L1PA16	LINE/L1	5793	6163	(3)	301929
18	24.0	1.6	3.2	chr1	204828678	204828739	(44127683)	+	(GCG)n	Simple_repeat	1	63	(0)	302355
13	23.5	0.0	7.0	chr1	204828872	204828928	(44127494)	+	(CCCTC)n	Simple_repeat	1	57	(0)	302356
412	21.6	3.0	2.9	chr1	206923601	206924793	(42031629)	+	(GT)n	Simple_repeat	1	1229	(0)	305929
305	32.2	10.0	5.4	chr1	207168950	207169389	(41787033)	C	L1M5	LINE/L1	(1441)	4705	4252	306300
2052	13.4	3.6	4.1	chr1	207169390	207169755	(41786667)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	306301
305	32.2	10.0	5.4	chr1	207169756	207170102	(41786320)	C	L1M5	LINE/L1	(1895)	4251	3859	306300
516	26.2	1.6	2.4	chr1	207885013	207885137	(41071285)	+	MIR3	SINE/MIR	82	205	(3)	307280
35	2.8	0.0	0.0	chr1	208244300	208244336	(40712086)	+	(GCG)n	Simple_repeat	1	37	(0)	307822
12	14.0	7.3	2.3	chr1	208244413	208244453	(40711969)	+	(CCGCGG)n	Simple_repeat	1	44	(0)	307823
17	23.0	0.0	4.9	chr1	208244441	208244501	(40711921)	+	(CCGCCC)n	Simple_repeat	1	61	(0)	307824
18	26.0	2.2	5.4	chr1	208244454	208244502	(40711920)	+	(CCCG)n	Simple_repeat	2	93	(0)	307825
3935	11.0	1.9	2.3	chr1	210280364	210280930	(38675492)	+	MER61E	LTR/ERV1	1	565	(4)	310902
15	20.4	0.0	0.0	chr1	211259202	211259230	(37697192)	+	(C)n	Simple_repeat	1	29	(0)	312388
25	19.3	0.0	0.0	chr1	211259429	211259481	(37696941)	+	(CCT)n	Simple_repeat	1	53	(0)	312389
15	18.4	2.1	4.2	chr1	211259610	211259656	(37696766)	+	(CGGCAG)n	Simple_repeat	1	48	(0)	312390
14	4.8	0.0	4.2	chr1	211259634	211259657	(37696765)	+	(CGG)n	Simple_repeat	1	24	(0)	312391
510	25.4	4.0	4.0	chr1	211326219	211326394	(37630028)	+	MIRb	SINE/MIR	23	198	(70)	312506
248	30.9	2.2	9.8	chr1	211735752	211735945	(37220477)	C	MIRc	SINE/MIR	(7)	261	83	313285
22	20.9	0.0	0.0	chr1	212567134	212567174	(36389248)	+	(T)n	Simple_repeat	1	41	(0)	314770
12	24.1	0.0	0.0	chr1	212608883	212608916	(36347506)	+	(CCCGC)n	Simple_repeat	1	34	(0)	314847
2052	13.2	4.4	4.4	chr1	212771865	212772228	(36184194)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	315110
10198	15.9	3.2	3.1	chr1	212772229	212772377	(36184045)	+	L1MA3	LINE/L1	5911	6059	(1503)	315097
487	30.4	2.6	2.1	chr1	212782730	212782917	(36173505)	C	Tigger16b	DNA/TcMar-Tigger	(2)	334	146	315126
225	27.2	1.1	13.2	chr1	212783004	212783025	(36173397)	C	SVA_A	Retroposon/SVA	(1172)	215	207	315127
553	21.4	0.0	0.0	chr1	212783026	212783123	(36173299)	+	AluJo	SINE/Alu	2	99	(213)	315128
16	18.7	7.0	0.0	chr1	214551802	214551844	(34404578)	+	(GC)n	Simple_repeat	1	46	(0)	317877
2280	10.9	2.2	2.2	chr1	214576016	214576370	(34380052)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	317923
11109	10.0	3.2	0.5	chr1	214576371	214577906	(34378516)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	317923
2000	14.1	5.6	1.9	chr1	214759280	214759640	(34196782)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	318165
2253	13.6	0.3	0.3	chr1	215041825	215042157	(33914265)	C	THE1B	LTR/ERVL-MaLR	(0)	364	32	318568
2446	9.2	0.0	1.9	chr1	215070129	215070445	(33885977)	+	AluY	SINE/Alu	1	311	(0)	318613
2524	11.3	0.0	4.2	chr1	215070446	215070751	(33885671)	C	THE1B	LTR/ERVL-MaLR	(65)	299	1	318612
210	28.3	9.1	11.8	chr1	215070752	215070815	(33885607)	C	L2c	LINE/L2	(76)	3311	3253	318611
13	0.0	0.0	4.8	chr1	215567283	215567303	(33389119)	+	(TCC)n	Simple_repeat	1	21	(0)	319244
12	15.8	0.0	3.3	chr1	215567376	215567405	(33389017)	+	(GGC)n	Simple_repeat	1	30	(0)	319245
18	20.5	1.9	3.6	chr1	215567559	215567612	(33388810)	+	(CCG)n	Simple_repeat	1	55	(0)	319246
2187	12.6	4.1	0.6	chr1	217004239	217004589	(31951833)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	321101
30	9.9	1.7	3.4	chr1	217135519	217135576	(31820846)	+	(GGC)n	Simple_repeat	1	59	(0)	321298
2043	16.4	2.3	0.0	chr1	218353616	218353913	(30602509)	+	AluJr	SINE/Alu	2	306	(6)	323103
679	32.5	6.1	5.3	chr1	218353914	218354191	(30602231)	+	L2c	LINE/L2	3108	3385	(2)	323102
6190	13.5	5.1	0.8	chr1	219096803	219097781	(29858641)	+	THE1B-int	LTR/ERVL-MaLR	558	1580	(0)	324155
2256	14.4	1.1	0.3	chr1	219097782	219098142	(29858280)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	324155
800	28.0	11.2	1.3	chr1	219098143	219098742	(29857680)	+	L1ME3F	LINE/L1	4249	4915	(1231)	324153
2201	10.5	1.4	0.9	chr1	219307626	219307971	(29648451)	+	THE1A	LTR/ERVL-MaLR	1	348	(7)	324431
10116	9.7	0.3	2.2	chr1	219307968	219309462	(29646960)	+	THE1A-int	LTR/ERVL-MaLR	114	1580	(0)	324431
2583	8.9	1.7	0.0	chr1	219824767	219825113	(29131309)	C	THE1A	LTR/ERVL-MaLR	(2)	353	1	325209
22	4.0	0.0	0.0	chr1	219825126	219825151	(29131271)	+	(A)n	Simple_repeat	1	26	(0)	325210
720	25.6	4.2	0.5	chr1	220093697	220093900	(28862522)	+	MER33	DNA/hAT-Charlie	2	213	(111)	325673
17	4.9	0.0	0.0	chr1	220093909	220093929	(28862493)	+	(AT)n	Simple_repeat	1	21	(0)	325674
12	19.3	0.0	5.1	chr1	220094064	220094102	(28862320)	+	(CCGCC)n	Simple_repeat	1	39	(0)	325675
31	9.2	0.0	0.0	chr1	220528033	220528079	(28428343)	+	(GGA)n	Simple_repeat	1	47	(0)	326370
13	13.2	6.7	4.2	chr1	220528171	220528215	(28428207)	+	(CGCGC)n	Simple_repeat	1	48	(0)	326371
15	23.4	2.8	5.4	chr1	220528499	220528570	(28427852)	+	(CCGCCTC)n	Simple_repeat	1	74	(0)	326372
13	18.4	0.0	0.0	chr1	220528630	220528660	(28427762)	+	(CTCCTC)n	Simple_repeat	1	31	(0)	326373
403	29.5	5.7	5.7	chr1	220689911	220690158	(28266264)	C	L1M5	LINE/L1	(504)	5620	5373	326594
11	20.1	2.9	0.0	chr1	220690463	220690496	(28265926)	+	G-rich	Low_complexity	1	35	(0)	326595
253	29.1	5.4	9.0	chr1	220810149	220810303	(28146119)	C	Charlie23a	DNA/hAT-Charlie	(147)	192	44	326776
13	21.5	4.0	1.9	chr1	220879536	220879585	(28076837)	+	(CCGGCTC)n	Simple_repeat	1	52	(0)	326859
22	16.2	5.5	0.0	chr1	220880215	220880269	(28076153)	+	(CAGCAA)n	Simple_repeat	1	58	(0)	326860
14	8.7	0.0	3.7	chr1	221228952	221228978	(27727444)	+	(CTC)n	Simple_repeat	1	27	(0)	327343
886	23.0	3.4	1.0	chr1	221229149	221229350	(27727072)	+	MIR	SINE/MIR	35	241	(21)	327344
14	8.1	3.9	0.0	chr1	221742866	221742891	(27213531)	+	(CGCC)n	Simple_repeat	1	27	(0)	328101
2760	6.6	2.0	0.0	chr1	223017619	223017966	(25938456)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	330053
871	12.4	0.6	14.4	chr1	223044782	223044969	(25911453)	+	AluJb	SINE/Alu	6	167	(145)	330093
1299	12.8	0.0	0.0	chr1	223044978	223045157	(25911265)	+	THE1B	LTR/ERVL-MaLR	58	237	(127)	330094
800	11.0	0.0	0.0	chr1	223045160	223045277	(25911145)	+	AluJb	SINE/Alu	191	308	(4)	330093
869	22.0	3.3	2.5	chr1	223045279	223045520	(25910902)	+	L1MEd	LINE/L1	1074	1317	(5769)	330090
2663	10.7	0.0	1.4	chr1	223046495	223046863	(25909559)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	330095
215	29.9	11.2	1.6	chr1	223143482	223143610	(25812812)	C	MIR1_Amn	SINE/MIR	(78)	152	10	330276
12	0.0	3.9	7.4	chr1	223364314	223364339	(25592083)	+	(GCG)n	Simple_repeat	1	27	(0)	330584
19	20.6	3.0	4.3	chr1	223712887	223712965	(25243457)	+	(GCGG)n	Simple_repeat	1	77	(0)	331090
19	3.7	0.0	3.3	chr1	223845786	223845815	(25110607)	+	(GGC)n	Simple_repeat	1	30	(0)	331313
17	19.6	6.7	3.8	chr1	223845956	223846030	(25110392)	+	(CCGCG)n	Simple_repeat	1	80	(0)	331314
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
16	25.2	1.7	3.3	chr1	224114132	224114191	(24842231)	+	(GGC)n	Simple_repeat	1	61	(0)	331817
13	7.5	7.1	0.0	chr1	224183155	224183182	(24773240)	+	(GGCG)n	Simple_repeat	1	30	(0)	331974
14	5.0	0.0	0.0	chr1	224183257	224183277	(24773145)	+	(GCC)n	Simple_repeat	1	21	(0)	331975
260	24.4	1.2	13.7	chr1	224184055	224184149	(24772273)	C	MIRc	SINE/MIR	(62)	206	124	331976
13	14.6	8.5	2.0	chr1	224357171	224357217	(24599205)	+	(CTGCC)n	Simple_repeat	1	51	(0)	332414
23	21.6	0.0	0.0	chr1	224616317	224616327	(24340095)	+	(GCAGCG)n	Simple_repeat	1	21	(42)	332883
21	10.0	0.0	0.0	chr1	224616328	224616360	(24340062)	+	(GGC)n	Simple_repeat	1	33	(0)	332884
23	21.6	0.0	0.0	chr1	224616361	224616379	(24340043)	+	(GCAGCG)n	Simple_repeat	22	63	(0)	332883
2665	10.8	0.0	1.1	chr1	224621797	224622162	(24334260)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	332889
10068	12.5	6.9	0.1	chr1	224909906	224911423	(24044999)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	2	333354
2114	11.0	6.8	1.4	chr1	224911425	224911784	(24044638)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	333354
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
1664	19.7	7.6	1.9	chr1	225087085	225087457	(23868965)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	333566
4945	21.1	6.9	1.6	chr1	225087458	225088698	(23867724)	+	L1ME1	LINE/L1	85	1399	(5001)	333565
15	7.5	0.0	6.2	chr1	225427627	225427658	(23528764)	+	(GCCGC)n	Simple_repeat	1	32	(0)	333956
14	18.3	2.5	2.4	chr1	225427783	225427822	(23528600)	+	GA-rich	Low_complexity	1	41	(0)	333957
18	20.0	1.8	3.6	chr1	225428084	225428138	(23528284)	+	(CGCCT)n	Simple_repeat	1	56	(0)	333958
14	22.2	0.0	2.6	chr1	225652948	225652986	(23303436)	+	(CCT)n	Simple_repeat	1	39	(0)	334307
800	22.9	3.4	3.8	chr1	225809840	225809942	(23146480)	C	MER5C	DNA/hAT-Charlie	(128)	185	79	334623
2509	6.7	0.0	1.0	chr1	225975627	225975939	(22980483)	+	AluY	SINE/Alu	2	311	(0)	334938
12	23.0	6.9	1.6	chr1	226062414	226062471	(22893951)	+	G-rich	Low_complexity	1	62	(0)	335129
22	24.4	3.0	4.8	chr1	226062503	226062528	(22893894)	+	G-rich	Low_complexity	1	52	(51)	335129
17	25.9	3.9	0.0	chr1	226062529	226062579	(22893843)	+	(GC)n	Simple_repeat	1	53	(0)	335130
22	24.4	3.0	4.8	chr1	226062580	226062602	(22893820)	+	G-rich	Low_complexity	53	103	(0)	335129
20	17.0	1.7	5.1	chr1	226062730	226062787	(22893635)	+	(CGC)n	Simple_repeat	1	59	(0)	335131
216	33.3	9.8	3.2	chr1	226110954	226111077	(22845345)	C	MIRb	SINE/MIR	(72)	196	64	335234
2393	11.1	1.1	0.8	chr1	226344934	226345287	(22611135)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	335736
1566	15.0	5.1	1.1	chr1	226408353	226408632	(22547790)	C	AluJr	SINE/Alu	(20)	292	1	335835
586	27.9	1.3	0.0	chr1	226943704	226943850	(22012572)	C	L1ME1	LINE/L1	(23)	6156	6008	336732
19	21.8	5.6	1.3	chr1	227318062	227318132	(21638290)	+	(GCCGC)n	Simple_repeat	1	75	(0)	337281
13	21.7	0.0	0.0	chr1	227318187	227318218	(21638204)	+	(GCG)n	Simple_repeat	1	32	(0)	337282
13	29.9	2.0	0.0	chr1	227318360	227318409	(21638013)	+	(CCTCT)n	Simple_repeat	1	51	(0)	337283
22	24.8	1.3	2.6	chr1	227318505	227318579	(21637843)	+	(CCCCCG)n	Simple_repeat	1	76	(0)	337284
267	20.0	3.8	7.4	chr1	227485573	227485598	(21470824)	C	L1ME4b	LINE/L1	(788)	104	79	337582
1836	14.9	5.8	4.5	chr1	227485599	227485957	(21470465)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	337583
267	20.0	3.8	7.4	chr1	227485958	227486038	(21470384)	C	L1ME4b	LINE/L1	(814)	78	1	337582
14	12.7	0.0	0.0	chr1	227947529	227947554	(21008868)	+	(ACG)n	Simple_repeat	1	26	(0)	338087
18	27.2	1.2	4.8	chr1	227947679	227947760	(21008662)	+	(GCCCC)n	Simple_repeat	1	83	(0)	338088
34	0.0	0.0	0.0	chr1	228458656	228458684	(20497738)	+	(GT)n	Simple_repeat	1	29	(0)	338742
2252	9.1	0.0	0.3	chr1	228458853	228459160	(20497262)	C	AluSc	SINE/Alu	(2)	307	1	338743
21	22.0	3.5	4.5	chr1	228487723	228487808	(20468614)	+	(GCCGC)n	Simple_repeat	1	89	(0)	338798
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
18	24.5	0.0	0.0	chr1	228646795	228646837	(20309585)	+	(CA)n	Simple_repeat	1	43	(0)	338981
563	22.5	0.0	1.6	chr1	228647911	228648032	(20308390)	C	5S	rRNA	(1)	120	1	338982
15	21.3	9.3	0.0	chr1	228735308	228735361	(20221061)	+	(CG)n	Simple_repeat	1	59	(0)	339120
18	10.0	0.0	2.9	chr1	228735416	228735449	(20220973)	+	(CCCG)n	Simple_repeat	1	34	(0)	339121
28	0.0	12.5	0.0	chr1	229342108	229342155	(19614267)	+	(CCGCGTCCT)n	Simple_repeat	1	54	(0)	340085
13	12.2	2.4	7.1	chr1	229342214	229342254	(19614168)	+	G-rich	Low_complexity	1	42	(0)	340086
13	17.8	0.0	2.9	chr1	229342542	229342575	(19613847)	+	(CCGCC)n	Simple_repeat	1	34	(0)	340087
16	23.3	2.2	0.0	chr1	229626252	229626296	(19330126)	+	(GCC)n	Simple_repeat	1	46	(0)	340622
2031	11.2	1.8	0.0	chr1	229684945	229685212	(19271210)	C	AluSc	SINE/Alu	(36)	273	1	340719
3956	22.6	5.4	8.1	chr1	229685213	229685703	(19270719)	C	L1M4	LINE/L1	(5750)	1870	1385	340716
16	20.3	0.0	2.4	chr1	230066975	230067016	(18889406)	+	(CCCCGC)n	Simple_repeat	1	42	(0)	341372
12	18.1	0.0	3.0	chr1	230067368	230067400	(18889022)	+	(GCGCCG)n	Simple_repeat	1	33	(0)	341373
11	20.6	5.1	0.0	chr1	230426142	230426180	(18530242)	+	(GCGGCGG)n	Simple_repeat	1	41	(0)	341848
16	18.6	6.1	0.0	chr1	230426471	230426519	(18529903)	+	G-rich	Low_complexity	1	52	(0)	341849
14	17.5	0.0	6.8	chr1	230978359	230978402	(17978020)	+	(GGC)n	Simple_repeat	1	44	(0)	342718
18	18.6	3.3	4.8	chr1	230978506	230978565	(17977857)	+	(GCC)n	Simple_repeat	1	62	(0)	342719
13	21.0	0.0	4.8	chr1	230978606	230978647	(17977775)	+	(GCC)n	Simple_repeat	1	42	(0)	342719
15	17.6	0.0	0.0	chr1	230978633	230978664	(17977758)	+	(CTG)n	Simple_repeat	1	32	(0)	342720
29	21.2	3.6	1.2	chr1	230978735	230978817	(17977605)	+	(CAG)n	Simple_repeat	1	86	(0)	342721
13	22.4	1.7	6.7	chr1	231421470	231421528	(17534894)	+	(GCC)n	Simple_repeat	1	60	(0)	343470
24	18.8	1.6	3.1	chr1	231421889	231421952	(17534470)	+	(GGC)n	Simple_repeat	1	65	(0)	343471
12	13.9	0.0	0.0	chr1	231422196	231422219	(17534203)	+	(GCC)n	Simple_repeat	1	24	(0)	343472
18	20.7	1.6	4.8	chr1	231422324	231422384	(17534038)	+	G-rich	Low_complexity	1	62	(0)	343473
12	17.2	4.9	2.3	chr1	231422410	231422450	(17533972)	+	(CCTCGG)n	Simple_repeat	1	43	(0)	343474
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
2226	5.5	2.9	1.1	chr1	231492591	231492864	(17463558)	+	AluSc	SINE/Alu	1	279	(30)	343589
41	0.0	0.0	0.0	chr1	231492865	231492902	(17463520)	+	(AACA)n	Simple_repeat	1	38	(0)	343590
485	32.8	9.9	6.8	chr1	231492911	231493290	(17463132)	C	HAL1	LINE/L1	(2049)	458	66	343591
2407	10.5	3.1	0.9	chr1	232610941	232611287	(16345135)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	345159
11349	10.1	1.1	0.8	chr1	232611288	232612862	(16343560)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	345159
2415	10.0	1.1	0.8	chr1	232643915	232644268	(16312154)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	345196
333	35.3	6.8	5.8	chr1	232739193	232739446	(16216976)	C	L2a	LINE/L2	(16)	3410	3161	345359
2154	13.8	4.7	1.6	chr1	232739447	232739815	(16216607)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	345360
13	13.1	4.1	7.8	chr1	233328323	233328376	(15628046)	+	(CCGC)n	Simple_repeat	1	51	(0)	346215
12	25.8	3.1	4.5	chr1	233328482	233328546	(15627876)	+	(GCGGCGC)n	Simple_repeat	1	67	(0)	346216
15	10.1	9.4	0.0	chr1	233328690	233328721	(15627701)	+	(CG)n	Simple_repeat	1	35	(0)	346217
28	18.4	2.9	1.4	chr1	233614033	233614102	(15342320)	+	G-rich	Low_complexity	1	72	(0)	346667
2091	15.0	11.2	0.8	chr1	233830151	233830533	(15125889)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	346960
10142	26.1	5.4	2.4	chr1	233830534	233833126	(15123296)	C	L1MB1	LINE/L1	(3587)	3051	675	346956
2318	13.3	3.3	3.3	chr1	234195691	234196054	(14760368)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	347501
2842	15.8	1.9	2.7	chr1	234196055	234196535	(14759887)	+	MER66B	LTR/ERV1	10	486	(0)	347502
13	18.8	0.0	0.0	chr1	234478558	234478588	(14477834)	+	(CCCGCC)n	Simple_repeat	1	31	(0)	347927
12	19.3	0.0	5.1	chr1	234600126	234600164	(14356258)	+	G-rich	Low_complexity	1	39	(0)	348157
37	15.3	0.0	1.4	chr1	234600189	234600258	(14356164)	+	(GCCCC)n	Simple_repeat	1	70	(0)	348158
14	16.2	1.8	8.6	chr1	234608656	234608712	(14347710)	+	(GCGGCC)n	Simple_repeat	1	58	(0)	348163
16	17.7	2.6	0.0	chr1	234609455	234609492	(14346930)	+	(GCC)n	Simple_repeat	1	39	(0)	348164
19	7.2	0.0	0.0	chr1	234609516	234609544	(14346878)	+	(GGA)n	Simple_repeat	1	29	(0)	348165
21	23.3	0.0	0.0	chr1	234609909	234609953	(14346469)	+	G-rich	Low_complexity	1	45	(0)	348166
21	27.5	1.1	4.4	chr1	234610078	234610167	(14346255)	+	(CGC)n	Simple_repeat	1	91	(0)	348167
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
678	21.8	5.9	6.5	chr1	234755206	234755391	(14201031)	C	MIRb	SINE/MIR	(79)	189	5	348391
13	22.5	3.6	3.5	chr1	235504156	235504218	(13452204)	+	(CGCAGG)n	Simple_repeat	1	63	(0)	349877
18	8.7	0.0	0.0	chr1	235901119	235901143	(13055279)	+	(AG)n	Simple_repeat	1	25	(0)	350588
769	21.3	9.1	1.7	chr1	235901514	235901747	(13054675)	+	LTR16A1	LTR/ERVL	204	456	(0)	350589
2007	14.8	0.0	1.0	chr1	235946986	235947290	(13009132)	+	AluJb	SINE/Alu	1	302	(10)	350692
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
2686	7.0	0.0	1.1	chr1	236161556	236161914	(12794508)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	351120
11372	8.8	1.3	0.0	chr1	236161915	236163473	(12792949)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	351120
2682	8.2	0.0	0.6	chr1	236163474	236163830	(12792592)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	351120
15	26.9	0.0	2.1	chr1	236395443	236395497	(12560925)	+	GA-rich	Low_complexity	1	53	(0)	351539
15	23.2	1.3	7.8	chr1	236395861	236395936	(12560486)	+	(GCCCCT)n	Simple_repeat	1	77	(0)	351540
535	23.0	8.4	1.9	chr1	236472688	236472842	(12483580)	C	MIRb	SINE/MIR	(17)	251	86	351709
762	26.3	15.8	2.0	chr1	236473049	236473451	(12482971)	C	L2a	LINE/L2	(0)	3426	2958	351710
40	14.7	3.0	4.9	chr1	236685955	236686053	(12270369)	+	GA-rich	Low_complexity	1	102	(0)	352103
20	15.7	7.3	2.7	chr1	236686381	236686448	(12269974)	+	G-rich	Low_complexity	1	73	(0)	352104
27	0.0	3.5	0.0	chr1	236686568	236686596	(12269826)	+	(CCCGCCG)n	Simple_repeat	1	30	(0)	352105
355	26.9	4.0	0.8	chr1	237225120	237225239	(11731183)	C	LTR79	LTR/ERVL	(2)	525	402	352970
1742	13.7	11.5	3.0	chr1	237225292	237225623	(11730799)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	352971
1995	14.7	5.5	5.8	chr1	238215221	238215602	(10740820)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	354367
825	24.7	15.7	6.0	chr1	238215603	238215730	(10740692)	+	L1M5	LINE/L1	5647	5789	(405)	354361
2044	12.8	7.7	0.3	chr1	238453798	238454133	(10502289)	+	THE1B	LTR/ERVL-MaLR	2	364	(0)	354725
225	30.9	0.0	4.2	chr1	238454226	238454296	(10502126)	+	L2a	LINE/L2	3359	3426	(0)	354726
556	25.8	1.8	4.7	chr1	239172233	239172464	(9783958)	+	L1ME1	LINE/L1	2444	2668	(3651)	355709
1003	18.5	4.8	0.0	chr1	239172467	239172666	(9783756)	+	THE1D	LTR/ERVL-MaLR	172	381	(0)	355714
811	23.5	1.9	0.0	chr1	239172668	239172880	(9783542)	C	L1M4	LINE/L1	(3437)	2709	2493	355715
2268	11.1	0.8	1.4	chr1	239332036	239332392	(9624030)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	355944
10960	10.7	1.9	0.1	chr1	239505655	239507205	(9449217)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	356236
1972	13.6	7.1	4.5	chr1	239507206	239507559	(9448863)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	356236
2055	16.2	3.3	2.2	chr1	239568204	239568563	(9387859)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	356331
2694	9.0	0.3	0.0	chr1	239680867	239681220	(9275202)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	356502
14	14.6	0.0	3.1	chr1	240091763	240091794	(8864628)	+	(GCG)n	Simple_repeat	1	32	(0)	357135
17	21.6	2.1	0.0	chr1	240091879	240091926	(8864496)	+	(AGCCGC)n	Simple_repeat	1	49	(0)	357136
177	36.5	0.4	0.7	chr1	241306129	241306853	(7649569)	+	(CA)n	Simple_repeat	1	728	(0)	359096
1541	26.1	6.2	1.0	chr1	241423267	241423789	(7532633)	C	L1MB8	LINE/L1	(7)	6171	5620	359282
1198	21.0	12.8	5.2	chr1	241423790	241424236	(7532186)	+	MER52D	LTR/ERV1	3	488	(1635)	359283
2166	12.2	5.2	3.1	chr1	241632008	241632363	(7324059)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	359582
299	31.8	12.6	1.7	chr1	241632364	241632414	(7324008)	+	MIRc	SINE/MIR	145	202	(66)	359581
18	29.4	1.5	0.0	chr1	241640173	241640238	(7316184)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	359586
13	18.9	0.0	0.0	chr1	243254979	243255008	(5701414)	+	(GCG)n	Simple_repeat	1	30	(0)	362301
18	13.9	0.0	0.0	chr1	243255125	243255157	(5701265)	+	(TCG)n	Simple_repeat	1	33	(0)	362302
298	24.5	16.8	1.9	chr1	243432805	243432966	(5523456)	+	Charlie21a	DNA/hAT-Charlie	1023	1213	(0)	362587
321	28.0	1.3	0.0	chr1	243433182	243433256	(5523166)	C	L2b	LINE/L2	(20)	3355	3280	362588
929	8.6	0.0	0.0	chr1	243433260	243433375	(5523047)	+	AluSg7	SINE/Alu	188	303	(6)	362589
22	22.9	4.1	1.3	chr1	243850046	243850118	(5106304)	+	(CGG)n	Simple_repeat	1	76	(0)	363167
13	32.1	0.0	0.0	chr1	243850081	243850130	(5106292)	+	G-rich	Low_complexity	1	50	(0)	363168
15	15.0	2.6	2.5	chr1	243850144	243850183	(5106239)	+	(CCCCT)n	Simple_repeat	1	40	(0)	363169
19	17.2	3.1	4.5	chr1	243850281	243850295	(5106127)	+	GA-rich	Low_complexity	1	15	(0)	363170
28	0.0	0.0	0.0	chr1	243850296	243850321	(5106101)	+	(GGC)n	Simple_repeat	1	26	(0)	363171
19	17.2	3.1	4.5	chr1	243850322	243850370	(5106052)	+	GA-rich	Low_complexity	16	63	(0)	363172
14	24.6	1.4	6.9	chr1	243850536	243850606	(5105816)	+	(CCG)n	Simple_repeat	1	72	(0)	363173
13	22.1	2.3	2.2	chr1	243850689	243850732	(5105690)	+	(CCCTG)n	Simple_repeat	1	45	(0)	363174
360	29.8	15.0	0.8	chr1	243910609	243910937	(5045485)	C	L2a	LINE/L2	(0)	3387	2961	363290
594	26.8	9.6	1.3	chr1	243910987	243911224	(5045198)	C	L2a	LINE/L2	(798)	2621	2362	363290
15	23.9	4.1	0.0	chr1	244048208	244048256	(4908166)	+	(CGC)n	Simple_repeat	1	51	(0)	363518
15	13.1	2.0	8.0	chr1	244048243	244048291	(4908131)	+	(CCGCC)n	Simple_repeat	1	50	(0)	363519
16	15.3	2.0	6.0	chr1	244048506	244048554	(4907868)	+	GA-rich	Low_complexity	1	50	(0)	363520
34	19.5	0.0	0.0	chr1	244048593	244048664	(4907758)	+	(C)n	Simple_repeat	1	72	(0)	363521
26	27.2	3.7	1.8	chr1	244048665	244048698	(4907724)	+	(CGCC)n	Simple_repeat	4	113	(0)	363522
22	25.3	1.2	3.7	chr1	244048798	244048877	(4907545)	+	G-rich	Low_complexity	1	81	(0)	363523
20	14.9	1.4	9.6	chr1	244049055	244049126	(4907296)	+	(GGCG)n	Simple_repeat	1	73	(0)	363524
2482	15.0	7.1	0.2	chr1	244364890	244365245	(4591177)	C	LTR47A	LTR/ERVL	(0)	452	66	364070
2678	9.7	0.6	0.3	chr1	244365246	244365608	(4590814)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	364071
2482	15.0	7.1	0.2	chr1	244365609	244365672	(4590750)	C	LTR47A	LTR/ERVL	(387)	65	2	364070
16	10.5	3.2	0.0	chr1	244863106	244863136	(4093286)	+	(CCCCG)n	Simple_repeat	1	32	(0)	364909
30	0.0	0.0	0.0	chr1	244863396	244863421	(4093001)	+	(AC)n	Simple_repeat	1	26	(0)	364910
17	20.4	2.1	2.1	chr1	244863617	244863663	(4092759)	+	(CCG)n	Simple_repeat	1	48	(0)	364911
14	31.3	0.0	0.0	chr1	244863779	244863829	(4092593)	+	(GCT)n	Simple_repeat	1	51	(0)	364912
335	33.1	6.5	0.0	chr1	244874945	244875074	(4081348)	C	L2a	LINE/L2	(0)	3426	3288	364940
13	18.0	7.7	1.8	chr1	244969866	244969917	(3986505)	+	G-rich	Low_complexity	1	56	(0)	365185
2470	11.7	3.9	2.5	chr1	245025677	245026035	(3930387)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	365320
1518	17.2	6.4	1.5	chr1	245904112	245904436	(3051986)	+	THE1C	LTR/ERVL-MaLR	34	375	(0)	366683
6547	19.7	3.6	0.7	chr1	245904437	245905788	(3050634)	+	L1MA4	LINE/L1	286	1678	(5887)	366682
2267	11.3	1.0	0.0	chr1	246723610	246723918	(2232504)	+	AluSx	SINE/Alu	1	312	(0)	367991
15	12.0	0.0	0.0	chr1	246723921	246723950	(2232472)	+	(AAGA)n	Simple_repeat	1	30	(0)	367992
13	29.0	1.8	1.8	chr1	247111539	247111594	(1844828)	+	(GCG)n	Simple_repeat	1	57	(0)	368665
2194	19.4	6.4	13.9	chr1	247364708	247365004	(1591418)	C	LTR49-int	LTR/ERV1	(5555)	776	480	369022
2759	8.2	0.3	0.3	chr1	247365005	247365359	(1591063)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	369032
11659	9.1	2.2	0.8	chr1	247365360	247365600	(1590822)	+	THE1A-int	LTR/ERVL-MaLR	1	259	(1321)	369032
6484	14.0	3.5	1.5	chr10	795600	796038	(133001384)	+	L1PA15-16	LINE/L1	1891	2343	(4510)	371852
2563	11.6	0.6	0.3	chr10	796040	796402	(133001020)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	371854
3318	18.7	8.0	5.9	chr10	796403	797317	(133000105)	+	THE1B-int	LTR/ERVL-MaLR	1	936	(644)	371854
2350	12.1	2.8	0.3	chr10	2931453	2931807	(130865615)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	374372
2294	12.0	1.4	0.6	chr10	3517630	3517981	(130279441)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	375203
18	8.6	5.1	2.4	chr10	4344324	4344362	(129453060)	+	(GTTT)n	Simple_repeat	1	41	(0)	376364
22	22.9	0.0	5.4	chr10	6201418	6201491	(127595931)	+	G-rich	Low_complexity	1	74	(0)	379101
13	20.7	1.8	6.9	chr10	6201533	6201589	(127595833)	+	(GGCG)n	Simple_repeat	1	58	(0)	379102
1946	13.8	4.7	1.4	chr10	6291284	6291574	(127505848)	+	AluSz	SINE/Alu	1	301	(11)	379260
1992	14.4	4.7	0.8	chr10	6378197	6378561	(127418861)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	379412
2280	13.4	3.7	1.2	chr10	7047677	7048022	(126749400)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	380468
349	29.4	10.5	1.9	chr10	7216015	7216170	(126581252)	C	MIR	SINE/MIR	(67)	195	25	380683
2170	14.8	1.1	0.0	chr10	7216217	7216567	(126580855)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	380684
980	29.5	9.3	1.1	chr10	7326010	7326444	(126470978)	C	MER20B	DNA/hAT-Charlie	(268)	515	42	380844
30	14.4	5.6	1.3	chr10	7410927	7411024	(126386398)	+	(CTCG)n	Simple_repeat	1	102	(0)	380967
2122	12.7	3.2	8.8	chr10	7418420	7418817	(126378605)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	380977
402	27.7	9.8	2.4	chr10	7418818	7418946	(126378476)	C	L3	LINE/CR1	(91)	4008	3865	380976
712	26.7	6.7	0.9	chr10	8453769	8453980	(125343442)	+	MIR	SINE/MIR	6	230	(32)	382765
780	17.6	31.3	0.0	chr10	8454115	8454318	(125343104)	C	AluSz6	SINE/Alu	(13)	299	3	382766
1946	15.4	4.5	1.6	chr10	10686461	10686824	(123110598)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	385949
239	22.4	5.0	4.6	chr10	10819802	10819904	(122977518)	+	Charlie8	DNA/hAT-Charlie	2364	2427	(1)	386142
2716	10.0	0.6	0.0	chr10	10819915	10820265	(122977157)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	386143
14	22.8	0.0	4.4	chr10	11165375	11165419	(122632003)	+	(CTC)n	Simple_repeat	1	45	(0)	386566
389	31.8	11.1	1.4	chr10	11415134	11415353	(122382069)	+	MIRb	SINE/MIR	1	244	(24)	386859
15	20.9	0.0	7.0	chr10	11611162	11611218	(122186204)	+	(CCGCCCC)n	Simple_repeat	1	57	(0)	387152
19	0.0	9.7	0.0	chr10	11611514	11611544	(122185878)	+	(CGG)n	Simple_repeat	1	34	(0)	387153
477	25.8	5.6	6.5	chr10	11612005	11612203	(122185219)	+	MIR	SINE/MIR	12	208	(54)	387154
931	17.8	10.3	1.6	chr10	12196677	12196933	(121600489)	+	L1MA8	LINE/L1	6000	6281	(10)	388371
2386	11.7	0.8	0.8	chr10	12880793	12881147	(120916275)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	389744
14	14.4	5.0	2.4	chr10	13299914	13299953	(120497469)	+	(GGCGCC)n	Simple_repeat	1	42	(0)	390494
1095	10.7	26.7	2.2	chr10	13300261	13300485	(120496937)	C	AluJr	SINE/Alu	(12)	300	1	390495
34	16.7	6.0	1.1	chr10	14174239	14174321	(119623101)	+	(CT)n	Simple_repeat	1	88	(0)	392027
1447	14.2	4.8	3.6	chr10	14213717	14213964	(119583458)	+	THE1B	LTR/ERVL-MaLR	1	251	(113)	392101
1674	12.2	0.4	0.4	chr10	14213960	14214205	(119583217)	+	THE1B	LTR/ERVL-MaLR	119	364	(0)	392102
1978	12.2	9.7	2.0	chr10	14243189	14243539	(119553883)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	392152
2105	15.5	0.7	1.9	chr10	14450932	14451475	(119345947)	+	L1M3	LINE/L1	4879	5557	(616)	392479
2597	10.1	0.0	1.4	chr10	14451476	14451835	(119345587)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	392480
2105	16.9	0.3	1.8	chr10	14451836	14451856	(119345566)	+	L1M3	LINE/L1	5249	5264	(876)	392479
2437	10.3	4.4	3.6	chr10	15726939	15727299	(118070123)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	394715
1593	25.5	6.8	0.9	chr10	15988218	15988238	(117809184)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	552	395097
2153	15.1	1.1	0.0	chr10	15988239	15988589	(117808833)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	395098
2240	14.0	4.2	1.9	chr10	16465697	16466068	(117331354)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	395883
13	26.8	4.7	1.5	chr10	17454109	17454172	(116343250)	+	(GGCGC)n	Simple_repeat	1	67	(0)	397407
21	8.9	2.8	0.0	chr10	17454181	17454216	(116343206)	+	(GCA)n	Simple_repeat	1	37	(0)	397408
30	27.5	3.1	3.0	chr10	17454240	17454368	(116343054)	+	(CGC)n	Simple_repeat	1	133	(0)	397409
13	14.0	0.0	5.7	chr10	17454456	17454498	(116342924)	+	(CGGCCC)n	Simple_repeat	1	40	(0)	397410
306	30.4	0.0	2.8	chr10	17454570	17454640	(116342782)	C	L1MD2	LINE/L1	(6075)	472	404	397411
18	0.0	0.0	0.0	chr10	17616645	17616664	(116180758)	+	(A)n	Simple_repeat	1	20	(0)	397751
15	25.3	1.5	4.5	chr10	17616954	17617019	(116180403)	+	(GCCCCCT)n	Simple_repeat	1	67	(0)	397752
18	8.8	2.5	4.9	chr10	17617404	17617443	(116179979)	+	(CCCCG)n	Simple_repeat	1	41	(0)	397753
2797	7.9	0.3	5.3	chr10	17786744	17787117	(116010305)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	398025
327	32.4	2.3	5.0	chr10	17787423	17787601	(116009821)	C	LTR88c	LTR/Gypsy?	(593)	269	96	398026
1900	15.4	4.3	2.5	chr10	18764618	18764984	(115032438)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	399622
843	11.4	0.0	0.0	chr10	18991184	18991314	(114806108)	C	THE1B-int	LTR/ERVL-MaLR	(1449)	131	1	399943
2576	11.6	0.3	0.3	chr10	18991315	18991678	(114805744)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	399943
328	23.8	5.6	0.0	chr10	19716108	19716208	(114081214)	C	Charlie1a	DNA/hAT-Charlie	(311)	1144	1038	401005
2302	12.6	5.6	0.7	chr10	19716209	19716615	(114080807)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	401008
2854	23.5	5.1	7.9	chr10	19716616	19717683	(114079739)	C	Charlie1a	DNA/hAT-Charlie	(417)	1038	3	401009
2145	14.5	3.3	2.8	chr10	20352455	20352816	(113444606)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	401964
1183	26.2	7.5	3.1	chr10	20352817	20353239	(113444183)	+	L1ME3Cz	LINE/L1	318	763	(234)	401963
2677	8.8	0.3	0.0	chr10	20382043	20382396	(113415026)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	402004
2054	10.1	8.9	1.4	chr10	20905275	20905626	(112891796)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	402680
46	2.2	0.0	0.0	chr10	21516769	21516814	(112280608)	+	(GGT)n	Simple_repeat	1	46	(0)	403857
41	2.4	0.0	0.0	chr10	21516876	21516917	(112280505)	+	(GCC)n	Simple_repeat	1	42	(0)	403858
57	3.5	0.0	0.0	chr10	21517091	21517150	(112280272)	+	(GGC)n	Simple_repeat	1	60	(0)	403859
15	6.8	6.1	2.9	chr10	21517322	21517354	(112280068)	+	(GGC)n	Simple_repeat	1	35	(0)	403860
15	15.7	0.0	5.1	chr10	21517438	21517476	(112279946)	+	(GGC)n	Simple_repeat	1	39	(0)	403861
14	10.7	0.0	5.9	chr10	21527274	21527307	(112270115)	+	G-rich	Low_complexity	1	34	(0)	403873
22	29.0	0.0	0.0	chr10	22003318	22003381	(111794041)	+	(CAG)n	Simple_repeat	1	64	(0)	404666
16	23.4	0.0	2.1	chr10	22003596	22003642	(111793780)	+	(GGCG)n	Simple_repeat	1	47	(0)	404667
673	0.0	0.0	0.0	chr10	22229508	22229582	(111567840)	C	tRNA-Asn-AAC	tRNA	(2)	75	1	404961
54	21.9	2.5	2.5	chr10	22321360	22321365	(111476057)	+	(GAGGCG)n	Simple_repeat	1	39	(122)	405119
56	25.5	0.0	0.0	chr10	22321366	22321502	(111475920)	+	GA-rich	Low_complexity	1	137	(0)	405120
54	21.9	2.5	2.5	chr10	22321503	22321516	(111475906)	+	(GAGGCG)n	Simple_repeat	40	161	(0)	405119
13	22.7	0.0	0.0	chr10	22336853	22336888	(111460534)	+	(AGCGCGC)n	Simple_repeat	1	36	(0)	405126
1277	12.4	10.4	2.4	chr10	22395922	22396164	(111401258)	C	MSTA	LTR/ERVL-MaLR	(0)	428	160	405208
2204	12.2	1.1	0.8	chr10	22396165	22396518	(111400904)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	405209
508	23.8	6.3	7.1	chr10	22441774	22442196	(111355226)	C	MLT1H	LTR/ERVL-MaLR	(22)	569	49	405270
1071	16.9	10.1	4.3	chr10	22442197	22442475	(111354947)	+	L1ME1	LINE/L1	5867	6163	(1)	405271
2693	8.9	0.3	0.8	chr10	22902162	22902525	(110894897)	C	THE1B	LTR/ERVL-MaLR	(0)	364	3	405968
2451	12.9	0.0	2.1	chr10	22909711	22910082	(110887340)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	405977
15	22.4	0.0	5.8	chr10	23192809	23192860	(110604562)	+	(CGG)n	Simple_repeat	1	52	(0)	406425
32	20.0	5.7	3.9	chr10	23192932	23193054	(110604368)	+	(CGG)n	Simple_repeat	1	130	(0)	406426
22	23.9	0.0	0.0	chr10	23193209	23193263	(110604159)	+	G-rich	Low_complexity	1	55	(0)	406427
1687	16.6	0.0	5.2	chr10	23488998	23489111	(110308311)	C	AluJr4	SINE/Alu	(20)	292	187	407011
2764	7.7	0.8	0.0	chr10	23489112	23489463	(110307959)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	407012
1687	16.6	0.0	5.2	chr10	23489464	23489656	(110307766)	C	AluJr4	SINE/Alu	(126)	186	1	407011
11780	8.7	1.5	1.3	chr10	24764278	24765854	(109031568)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	409069
2794	8.2	0.3	0.0	chr10	24765855	24766208	(109031214)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	409069
348	3.5	0.0	14.0	chr10	24766209	24766233	(109031189)	C	AluJb	SINE/Alu	(201)	111	88	409068
15	25.6	0.0	0.0	chr10	25175005	25175046	(108622376)	+	(AGC)n	Simple_repeat	1	42	(0)	409842
15	22.0	0.0	5.7	chr10	25934809	25934861	(107862561)	+	G-rich	Low_complexity	1	53	(0)	410940
286	28.9	7.6	3.2	chr10	26255145	26255394	(107542028)	C	L2-3_Crp	LINE/L2	(1100)	996	735	411343
11	10.8	4.1	9.8	chr10	26255443	26255491	(107541931)	+	(GGAGGT)n	Simple_repeat	1	51	(0)	411344
13	28.1	5.0	0.0	chr10	27240853	27240912	(106556510)	+	(CGC)n	Simple_repeat	1	63	(0)	413144
2400	10.5	2.8	1.7	chr10	27392585	27392941	(106404481)	+	THE1B	LTR/ERVL-MaLR	1	361	(3)	413377
15	22.6	0.0	5.8	chr10	27998931	27998982	(105798440)	+	(CGC)n	Simple_repeat	1	52	(0)	414304
1245	24.4	5.0	2.0	chr10	30068706	30069095	(103728327)	+	MER74B	LTR/ERVL	211	612	(10)	417992
18	17.8	2.2	2.1	chr10	31319443	31319488	(102477934)	+	(CCG)n	Simple_repeat	1	47	(0)	420165
16	26.5	1.6	3.2	chr10	31319540	31319601	(102477821)	+	(CCG)n	Simple_repeat	1	63	(0)	420165
20	7.4	4.2	6.0	chr10	31319878	31319925	(102477497)	+	(GGC)n	Simple_repeat	1	50	(0)	420166
23	9.7	0.0	0.0	chr10	32055519	32055551	(101741871)	+	(CA)n	Simple_repeat	1	33	(0)	421234
17	16.7	2.4	2.3	chr10	32056201	32056242	(101741180)	+	(GGC)n	Simple_repeat	1	43	(0)	421235
1856	16.2	2.5	3.1	chr10	32644548	32644904	(101152518)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	422213
42634	8.0	1.9	0.9	chr10	34969227	34975145	(98822277)	+	HERVE-int	LTR/ERV1	1	6022	(1791)	425710
2083	13.0	4.4	2.8	chr10	35314186	35314541	(98482881)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	426408
2584	9.7	0.6	0.0	chr10	37094072	37094422	(96703000)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	429101
4441	18.6	2.2	3.9	chr10	37094423	37095208	(96702214)	+	L1MB3	LINE/L1	5409	6173	(10)	429100
38	10.4	0.0	0.0	chr10	42165831	42165892	(91631530)	+	(GAATG)n	Simple_repeat	1	62	(0)	431764
85	9.6	1.3	1.3	chr10	42165959	42166108	(91631314)	+	(GGAAT)n	Simple_repeat	1	152	(0)	431765
2502	12.1	0.3	0.3	chr10	43016091	43016445	(90780977)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	432860
541	10.3	5.8	0.0	chr10	43016446	43016556	(90780866)	+	L1M4	LINE/L1	3174	3301	(2845)	432859
18	10.4	0.0	0.0	chr10	43138783	43138813	(90658609)	+	(TGTTT)n	Simple_repeat	1	31	(0)	432987
13	19.8	1.6	8.1	chr10	43407227	43407287	(90390135)	+	(GCCGCC)n	Simple_repeat	1	62	(0)	433435
9345	15.8	2.6	4.8	chr10	44302711	44303944	(89493478)	+	L1MA4	LINE/L1	3500	4685	(1458)	434681
1945	14.7	3.4	4.2	chr10	44303945	44304328	(89493094)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	434682
9345	15.8	3.1	4.8	chr10	44304329	44305629	(89491793)	+	L1MA4	LINE/L1	4686	6008	(292)	434681
24	27.6	5.6	1.8	chr10	46106989	46107149	(87690273)	+	(TC)n	Simple_repeat	1	167	(0)	437211
515	28.2	3.8	1.2	chr10	46285196	46285501	(87511921)	+	L1M5	LINE/L1	5126	5441	(801)	437441
2564	8.9	2.0	0.0	chr10	49438223	49438570	(84358852)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	441890
11797	9.5	0.6	0.3	chr10	49438571	49440146	(84357276)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	441890
270	29.6	10.1	2.7	chr10	50349385	50349530	(83447892)	+	MIRb	SINE/MIR	11	168	(100)	443223
2200	12.1	2.0	3.3	chr10	50349533	50349892	(83447530)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	443224
11464	9.3	1.1	0.6	chr10	50349893	50351463	(83445959)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	443224
2324	12.3	1.4	0.3	chr10	50351464	50351814	(83445608)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	443224
2778	7.6	0.3	0.0	chr10	50795834	50796187	(83001235)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	443881
204	28.3	3.6	0.0	chr10	50796272	50796324	(83001098)	C	MIR3	SINE/MIR	(133)	75	21	443882
36	0.0	0.0	0.0	chr10	50991311	50991343	(82806079)	+	(GCC)n	Simple_repeat	1	33	(0)	444194
2109	13.1	7.0	0.9	chr10	51011810	51012147	(82785275)	C	THE1B	LTR/ERVL-MaLR	(2)	362	3	444219
314	32.4	9.6	3.4	chr10	51012156	51012331	(82785091)	+	L3	LINE/CR1	3818	4005	(94)	444216
2284	11.2	0.7	0.0	chr10	52400276	52400579	(81396843)	+	AluSx	SINE/Alu	1	306	(6)	446230
2249	17.8	1.3	5.6	chr10	52400580	52400883	(81396539)	C	MER65C	LTR/ERV1	(159)	302	1	446229
421	37.0	8.6	7.3	chr10	52400884	52401074	(81396348)	+	L3	LINE/CR1	3891	4079	(20)	446227
40	0.0	0.0	0.0	chr10	52401085	52401118	(81396304)	+	(AC)n	Simple_repeat	1	34	(0)	446231
2296	11.2	2.2	1.4	chr10	56033504	56033855	(77763567)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	450939
2009	10.4	6.3	7.5	chr10	56059419	56059802	(77737620)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	450978
13	24.7	0.0	0.0	chr10	56518051	56518085	(77279337)	+	(TTTA)n	Simple_repeat	1	35	(0)	451556
2707	8.5	0.3	0.0	chr10	56518107	56518460	(77278962)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	451557
11141	10.8	0.5	0.1	chr10	56518461	56520034	(77277388)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	451557
2446	9.9	2.8	0.3	chr10	57031168	57031513	(76765909)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	452229
1992	13.4	4.6	3.0	chr10	57210889	57211249	(76586173)	C	THE1D	LTR/ERVL-MaLR	(0)	381	15	452447
322	13.8	12.1	0.0	chr10	57211224	57211303	(76586119)	+	THE1D-int	LTR/ERVL-MaLR	1541	1631	(0)	452448
551	15.3	3.3	0.8	chr10	57474928	57475046	(76322376)	C	L1M2	LINE/L1	(3092)	3051	2930	452771
1304	8.7	0.5	1.6	chr10	57475047	57475233	(76322189)	+	THE1A	LTR/ERVL-MaLR	171	355	(0)	452772
11384	9.1	2.5	0.0	chr10	58425778	58427318	(75370104)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	454121
2776	7.7	0.3	0.0	chr10	58427319	58427671	(75369751)	C	THE1A	LTR/ERVL-MaLR	(0)	355	2	454121
16	22.3	2.6	0.0	chr10	58512701	58512738	(75284684)	+	(GT)n	Simple_repeat	1	39	(0)	454284
2395	9.1	7.0	3.2	chr10	59776595	59776935	(74020487)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	456083
12752	8.8	0.1	0.5	chr10	59776936	59778518	(74018904)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	4	456083
15	22.2	7.7	0.0	chr10	60944059	60944110	(72853312)	+	(GC)n	Simple_repeat	1	56	(0)	457856
710	30.4	13.7	0.9	chr10	62470103	62470521	(71326901)	C	LTR16C	LTR/ERVL	(8)	481	1	460122
15	25.2	4.8	1.5	chr10	63133249	63133311	(70664111)	+	(GGC)n	Simple_repeat	1	66	(0)	461239
16	4.5	0.0	0.0	chr10	63466140	63466162	(70331260)	+	(GGC)n	Simple_repeat	1	23	(0)	461841
13	27.7	1.5	4.5	chr10	63521301	63521323	(70276099)	+	G-rich	Low_complexity	1	66	(0)	461936
17	8.3	4.8	4.5	chr10	63521324	63521365	(70276057)	+	(GGCG)n	Simple_repeat	1	44	(0)	461937
11	22.5	3.5	5.1	chr10	63521661	63521717	(70275705)	+	(GGCCTG)n	Simple_repeat	1	59	(0)	461938
29	22.2	5.7	3.8	chr10	63521784	63521907	(70275515)	+	(GCG)n	Simple_repeat	1	131	(0)	461939
345	27.8	8.9	6.5	chr10	63873092	63873340	(69924082)	+	L2a	LINE/L2	3134	3420	(6)	462547
582	28.2	13.4	7.6	chr10	63873373	63873424	(69923998)	+	MIRb	SINE/MIR	16	73	(195)	462548
2932	5.9	3.4	0.0	chr10	63873425	63873765	(69923657)	C	THE1A	LTR/ERVL-MaLR	(2)	353	1	462549
2545	12.2	0.8	0.3	chr10	63960553	63960905	(69836517)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	462698
34	24.0	2.1	5.6	chr10	67884874	67885014	(65912408)	+	(CGGCGG)n	Simple_repeat	1	144	(0)	468131
20	24.9	1.8	0.0	chr10	67885083	67885139	(65912283)	+	(ACG)n	Simple_repeat	1	58	(0)	468132
19	14.2	0.0	0.0	chr10	67885479	67885509	(65911913)	+	(T)n	Simple_repeat	1	31	(0)	468133
13	16.1	4.4	4.3	chr10	68146086	68146130	(65651292)	+	A-rich	Low_complexity	1	47	(0)	468602
2293	11.5	4.1	3.1	chr10	68276735	68277094	(65520328)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	468837
16	18.9	0.0	0.0	chr10	68527338	68527373	(65270049)	+	(GCCGCC)n	Simple_repeat	1	36	(0)	469455
260	28.1	3.4	1.7	chr10	68550740	68550855	(65246567)	+	L3	LINE/CR1	1153	1270	(2829)	469514
774	17.4	0.0	1.5	chr10	68551163	68551294	(65246128)	+	FLAM_C	SINE/Alu	1	130	(13)	469515
2060	14.2	0.0	0.0	chr10	68551295	68551583	(65245839)	C	AluSz6	SINE/Alu	(23)	289	1	469516
2129	22.6	11.4	3.7	chr10	69613802	69614766	(64182656)	+	L1MCb	LINE/L1	378	1415	(5008)	471937
28	4.5	4.0	3.9	chr10	69801822	69801871	(63995551)	+	(GGA)n	Simple_repeat	1	52	(0)	472288
2187	11.5	4.5	4.5	chr10	71094065	71094445	(62702977)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	474652
24	15.6	5.9	2.8	chr10	71212860	71212927	(62584495)	+	(GGC)n	Simple_repeat	1	72	(0)	474802
1927	12.9	3.6	0.0	chr10	71871343	71871461	(61925961)	C	AluSz	SINE/Alu	(180)	132	3	476063
561	18.3	8.4	13.4	chr10	71871462	71871574	(61925848)	C	MER57F	LTR/ERV1	(31)	404	279	476062
592	11.5	2.2	0.0	chr10	71871577	71871663	(61925759)	+	AluSx3	SINE/Alu	210	298	(13)	476065
1843	15.0	1.0	0.3	chr10	71871698	71871990	(61925432)	+	AluJb	SINE/Alu	1	295	(17)	476066
15	16.1	3.5	0.0	chr10	72260769	72260804	(61536618)	+	(CT)n	Simple_repeat	1	37	(0)	476890
17	10.7	4.5	4.3	chr10	72260962	72261005	(61536417)	+	(CCCCTC)n	Simple_repeat	1	46	(0)	476891
1443	19.3	10.6	0.0	chr10	73877327	73877595	(59919827)	C	AluJb	SINE/Alu	(11)	301	1	480069
17	18.2	0.0	0.0	chr10	73877714	73877744	(59919678)	+	(CA)n	Simple_repeat	1	31	(0)	480070
232	35.4	19.3	0.0	chr10	74255860	74256147	(59541275)	C	L2c	LINE/L2	(1)	3386	3030	480873
25	16.6	1.3	7.5	chr10	74825382	74825460	(58971962)	+	G-rich	Low_complexity	1	80	(0)	481941
19	15.9	3.9	1.9	chr10	74825912	74825962	(58971460)	+	G-rich	Low_complexity	1	53	(0)	481942
14	18.2	0.0	0.0	chr10	74826033	74826063	(58971359)	+	(CGCG)n	Simple_repeat	1	31	(0)	481943
1898	15.5	0.0	1.0	chr10	74916820	74917110	(58880312)	+	AluJb	SINE/Alu	1	288	(24)	482121
2179	12.7	7.5	2.3	chr10	75500552	75500905	(58296517)	C	THE1C	LTR/ERVL-MaLR	(0)	375	2	483198
716	33.7	13.0	3.9	chr10	76109375	76110485	(57686937)	+	L2b	LINE/L2	1632	2858	(561)	484076
2770	7.6	0.3	0.0	chr10	76110502	76110855	(57686567)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	484077
338	31.6	10.1	8.4	chr10	76110920	76111386	(57686036)	+	L2b	LINE/L2	2914	3370	(5)	484076
16	16.3	0.0	2.8	chr10	77638451	77638486	(56158936)	+	(GCA)n	Simple_repeat	1	36	(0)	486312
244	25.5	11.3	1.1	chr10	77889835	77889929	(55907493)	+	MER20B	DNA/hAT-Charlie	31	136	(647)	486744
29	12.3	1.9	0.0	chr10	77926755	77926807	(55870615)	+	(GGAGGA)n	Simple_repeat	1	54	(0)	486826
1738	16.6	0.3	5.2	chr10	78108004	78108196	(55689226)	C	AluJb	SINE/Alu	(20)	292	115	487172
2393	11.4	0.8	1.7	chr10	78108197	78108554	(55688868)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	487173
1738	16.6	0.3	5.2	chr10	78108555	78108667	(55688755)	C	AluJb	SINE/Alu	(198)	114	1	487172
2662	11.0	0.0	0.0	chr10	78243977	78244331	(55553091)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	487460
2540	14.8	3.3	2.1	chr10	78623056	78623477	(55173945)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	488156
16	23.6	3.3	3.2	chr10	79068720	79068780	(54728642)	+	A-rich	Low_complexity	1	63	(0)	488998
17	6.8	6.5	0.0	chr10	79068813	79068843	(54728579)	+	(GCG)n	Simple_repeat	1	33	(0)	488999
26	24.4	5.0	1.9	chr10	79069020	79069120	(54728302)	+	(AGCG)n	Simple_repeat	1	106	(0)	489000
14	7.8	0.0	6.5	chr10	79069140	79069170	(54728252)	+	(CGGAG)n	Simple_repeat	1	31	(0)	489001
16	17.2	2.4	2.4	chr10	79069217	79069257	(54728165)	+	(CGG)n	Simple_repeat	1	42	(0)	489002
22	20.9	4.8	5.5	chr10	79242947	79243050	(54554372)	+	G-rich	Low_complexity	1	109	(0)	489320
17	11.2	2.3	6.7	chr10	79243084	79243127	(54554295)	+	(TCC)n	Simple_repeat	1	45	(0)	489321
15	16.1	2.9	0.0	chr10	79243263	79243297	(54554125)	+	(CGCCCC)n	Simple_repeat	1	36	(0)	489322
17	15.0	0.0	4.9	chr10	79243326	79243366	(54554056)	+	(GGC)n	Simple_repeat	1	41	(0)	489323
25	19.1	2.9	7.5	chr10	79243437	79243546	(54553876)	+	(GGAGCG)n	Simple_repeat	1	104	(0)	489324
351	29.5	10.5	3.5	chr10	79327112	79327432	(54469990)	+	MLT1G	LTR/ERVL-MaLR	202	568	(11)	489421
260	37.0	7.7	2.2	chr10	82237015	82237135	(51560287)	+	L2b	LINE/L2	2784	2916	(503)	493681
206	38.4	2.6	0.9	chr10	82237227	82237339	(51560083)	+	L2b	LINE/L2	3014	3128	(247)	493681
52152	4.5	0.5	0.1	chr10	84108911	84116727	(49680695)	+	HERVE_a-int	LTR/ERV1	1	7846	(1)	496351
12	13.1	2.7	5.3	chr10	84328975	84329011	(49468411)	+	G-rich	Low_complexity	1	38	(0)	496707
2406	10.4	2.5	0.9	chr10	84454850	84455198	(49342224)	+	THE1B	LTR/ERVL-MaLR	1	355	(9)	496898
17	12.2	2.7	0.0	chr10	84455249	84455267	(49342155)	+	(CTTT)n	Simple_repeat	1	19	(0)	496899
2336	11.4	1.3	0.0	chr10	84455268	84455575	(49341847)	C	AluSx1	SINE/Alu	(0)	312	1	496900
985	14.4	0.0	0.0	chr10	87095785	87095930	(46701492)	+	FRAM	SINE/Alu	1	146	(30)	500705
22	22.5	0.0	7.8	chr10	87863404	87863493	(45933929)	+	(CTCCC)n	Simple_repeat	1	90	(0)	501930
16	9.3	2.6	5.1	chr10	87863519	87863556	(45933866)	+	(GGCG)n	Simple_repeat	1	39	(0)	501931
22	30.2	2.0	2.9	chr10	87863717	87863818	(45933604)	+	(CGG)n	Simple_repeat	1	104	(0)	501932
30	26.9	1.0	2.0	chr10	87863903	87863999	(45933423)	+	(GGC)n	Simple_repeat	1	98	(0)	501933
16	27.6	0.0	1.8	chr10	88880176	88880230	(44917192)	+	(CAGAGG)n	Simple_repeat	1	55	(0)	503504
2371	11.4	1.1	0.8	chr10	89551535	89551888	(44245534)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	504559
2250	11.1	0.0	1.0	chr10	89551929	89552234	(44245188)	C	AluSx4	SINE/Alu	(7)	303	1	504560
16	12.8	2.8	2.7	chr10	89645039	89645074	(44152348)	+	(CTC)n	Simple_repeat	1	37	(0)	504723
1611	14.7	6.4	5.8	chr10	90191490	90191865	(43605557)	C	THE1D	LTR/ERVL-MaLR	(12)	369	1	505508
33	5.0	4.4	4.2	chr10	90858056	90858123	(42939299)	+	(CCG)n	Simple_repeat	1	71	(0)	506428
22	25.9	6.1	2.5	chr10	91220482	91220596	(42576826)	+	(GGC)n	Simple_repeat	1	122	(0)	506997
13	13.0	0.0	9.8	chr10	91220793	91220833	(42576589)	+	(CGG)n	Simple_repeat	1	41	(0)	506998
27	16.1	4.1	2.6	chr10	91410234	91410306	(42387116)	+	G-rich	Low_complexity	1	76	(0)	507281
18	25.9	1.3	5.2	chr10	91410354	91410429	(42386993)	+	(CGC)n	Simple_repeat	1	77	(0)	507282
16	0.0	0.0	0.0	chr10	91410947	91410967	(42386455)	+	(TGCC)n	Simple_repeat	1	21	(0)	507283
15	27.3	3.1	1.5	chr10	91798701	91798764	(41998658)	+	(GCCGCG)n	Simple_repeat	1	66	(0)	507864
13	24.7	5.7	2.7	chr10	92689910	92689979	(41107443)	+	(GGAGCGC)n	Simple_repeat	1	74	(0)	509677
12	21.0	0.0	7.8	chr10	92690390	92690440	(41106982)	+	G-rich	Low_complexity	1	51	(0)	509678
12	10.4	6.1	2.9	chr10	92848751	92848783	(40948639)	+	G-rich	Low_complexity	1	35	(0)	510023
2074	12.6	6.3	1.6	chr10	93651279	93651641	(40145781)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	511532
20	16.7	0.0	0.0	chr10	93702254	93702287	(40095135)	+	A-rich	Low_complexity	1	34	(0)	511623
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
22	29.4	1.3	0.0	chr10	94402731	94402759	(39394663)	+	(GGCGGA)n	Simple_repeat	1	73	(0)	512920
23	15.7	0.0	0.0	chr10	94402760	94402802	(39394620)	+	GA-rich	Low_complexity	1	43	(0)	512921
21	6.1	2.9	0.0	chr10	94403609	94403642	(39393780)	+	(CGGGGC)n	Simple_repeat	1	35	(0)	512922
26	3.1	3.0	0.0	chr10	94403651	94403683	(39393739)	+	(GGAGCC)n	Simple_repeat	1	34	(0)	512923
1767	18.1	10.6	1.1	chr10	95182914	95183369	(38614053)	+	MER101-int	LTR/ERV1	3937	4381	(2258)	513853
13	21.8	2.7	0.0	chr10	95183860	95183896	(38613526)	+	(CGC)n	Simple_repeat	1	38	(0)	513856
12	24.2	3.5	3.4	chr10	95184025	95184081	(38613341)	+	(CAGGAG)n	Simple_repeat	1	59	(0)	513857
16	26.4	2.8	2.7	chr10	95291011	95291081	(38506341)	+	G-rich	Low_complexity	1	73	(0)	514030
2181	13.8	3.5	1.4	chr10	95658211	95658577	(38138845)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	514693
2634	9.2	1.1	3.5	chr10	96190941	96191313	(37606109)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	515527
209	26.2	16.3	1.0	chr10	96587309	96587412	(37210010)	+	MIRc	SINE/MIR	84	206	(62)	516222
20	5.5	4.8	4.5	chr10	96832407	96832448	(36964974)	+	(CCG)n	Simple_repeat	1	44	(0)	516802
22	24.1	1.4	2.7	chr10	96832658	96832729	(36964693)	+	(CCTCCC)n	Simple_repeat	1	73	(0)	516803
18	25.0	4.0	3.8	chr10	96832884	96832959	(36964463)	+	(CG)n	Simple_repeat	1	79	(0)	516804
11	16.5	5.9	0.0	chr10	96832966	96832999	(36964423)	+	(GAGGTG)n	Simple_repeat	1	36	(0)	516805
15	31.5	3.4	4.9	chr10	97713625	97713743	(36083679)	+	GA-rich	Low_complexity	1	123	(0)	518570
25	23.3	2.8	5.5	chr10	97713845	97713950	(36083472)	+	(CGC)n	Simple_repeat	1	109	(0)	518571
50	22.4	2.2	5.4	chr10	100655870	100656049	(33141373)	+	(TCC)n	Simple_repeat	1	184	(0)	523737
2855	7.3	0.3	0.3	chr10	101326649	101327003	(32470419)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	524887
12148	9.5	0.6	0.0	chr10	101327004	101328573	(32468849)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	524887
13	14.2	3.2	0.0	chr10	101354262	101354292	(32443130)	+	(GGCGCT)n	Simple_repeat	1	32	(0)	524954
15	17.0	6.2	2.0	chr10	101694328	101694375	(32103047)	+	G-rich	Low_complexity	1	51	(0)	525476
19	4.0	0.0	0.0	chr10	101694598	101694623	(32102799)	+	(CCT)n	Simple_repeat	1	26	(0)	525477
12	15.3	5.3	2.5	chr10	101695111	101695148	(32102274)	+	(GCCCGA)n	Simple_repeat	1	40	(0)	525478
575	27.7	8.3	2.9	chr10	104173981	104174208	(29623214)	+	L1M5	LINE/L1	4114	4354	(1792)	530284
2498	12.3	1.4	1.4	chr10	104174209	104174572	(29622850)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	530285
2162	5.0	6.7	1.4	chr10	104338908	104339188	(29458234)	C	AluSp	SINE/Alu	(15)	298	2	530551
2300	11.4	3.3	2.8	chr10	104583251	104583612	(29213810)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	530944
632	33.3	5.2	6.9	chr10	106236367	106236580	(27560842)	+	MamGypLTR1a	LTR/Gypsy	18	226	(558)	533415
1654	16.9	7.4	4.8	chr10	106236581	106236934	(27560488)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	533416
2769	7.6	0.3	6.3	chr10	106906046	106906114	(26891308)	C	THE1A	LTR/ERVL-MaLR	(0)	355	306	534453
2250	11.4	2.9	0.0	chr10	106906115	106906413	(26891009)	C	AluSx1	SINE/Alu	(4)	308	1	534454
2769	7.6	0.3	6.3	chr10	106906414	106906721	(26890701)	C	THE1A	LTR/ERVL-MaLR	(50)	305	1	534453
14	30.7	0.0	0.0	chr10	110008207	110008254	(23789168)	+	(GGC)n	Simple_repeat	1	48	(0)	538775
1939	14.1	4.4	4.1	chr10	110047969	110048330	(23749092)	+	THE1B	LTR/ERVL-MaLR	1	363	(1)	538837
11327	9.6	0.9	1.1	chr10	110048332	110049605	(23747817)	+	THE1B-int	LTR/ERVL-MaLR	1	1281	(299)	538837
18	12.6	0.0	0.0	chr10	110208412	110208438	(23588984)	+	(T)n	Simple_repeat	1	27	(0)	539104
12	22.6	2.3	2.3	chr10	110497915	110497957	(23299465)	+	G-rich	Low_complexity	1	44	(0)	539647
19	2.6	6.8	6.4	chr10	110498077	110498121	(23299301)	+	(GCG)n	Simple_repeat	1	45	(0)	539648
2268	11.8	4.4	3.1	chr10	110552598	110552954	(23244468)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	539753
872	30.6	6.7	4.3	chr10	110552955	110553173	(23244249)	+	LTR16E1	LTR/ERVL	321	533	(5)	539752
15	15.9	2.9	0.0	chr10	110872100	110872134	(22925288)	+	G-rich	Low_complexity	1	36	(0)	540304
2524	6.6	0.0	0.7	chr10	111033868	111034170	(22763252)	+	AluY	SINE/Alu	1	301	(10)	540509
2400	9.7	1.7	3.6	chr10	111034171	111034415	(22763007)	C	THE1A	LTR/ERVL-MaLR	(117)	238	1	540508
574	24.3	1.4	0.7	chr10	111034416	111034552	(22762870)	C	L1ME3A	LINE/L1	(587)	5586	5449	540507
16	16.1	2.2	4.3	chr10	113126886	113126931	(20670491)	+	(GCGG)n	Simple_repeat	1	45	(0)	543814
15	21.8	0.0	0.0	chr10	114821988	114822024	(18975398)	+	(GCG)n	Simple_repeat	1	37	(0)	546602
317	31.4	11.7	3.4	chr10	115030897	115031250	(18766172)	+	L2b	LINE/L2	2912	3298	(128)	546972
2493	11.0	0.0	1.9	chr10	115106493	115106854	(18690568)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	547084
1113	22.0	8.5	0.7	chr10	115106855	115107124	(18690298)	C	MSTD	LTR/ERVL-MaLR	(42)	354	62	547085
11342	9.2	0.9	0.4	chr10	115137768	115139338	(18658084)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	547124
2095	13.3	7.4	1.5	chr10	115139339	115139680	(18657742)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	547124
2874	6.0	0.0	0.0	chr10	115677393	115677745	(18119677)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	547733
2172	20.9	2.0	5.8	chr10	115677746	115678127	(18119295)	C	LTR55	LTR/ERVL?	(183)	365	1	547732
1916	11.1	7.6	9.3	chr10	116002493	116002880	(17794542)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	548164
13	23.4	5.8	2.4	chr10	117137134	117137195	(16660227)	+	G-rich	Low_complexity	1	64	(0)	549930
502	34.5	2.8	4.4	chr10	117302618	117302635	(16494787)	C	MER8	DNA/TcMar-Tigger	(0)	239	227	550203
2707	6.8	0.0	2.7	chr10	117302636	117303000	(16494422)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	550208
11482	8.6	1.8	0.4	chr10	117303001	117304557	(16492865)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	550208
65	21.4	0.0	0.0	chr10	117542303	117542494	(16254928)	+	GA-rich	Low_complexity	1	192	(0)	550654
2392	9.7	1.1	2.5	chr10	117984926	117985285	(15812137)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	551397
19	15.4	3.7	3.6	chr10	118754225	118754278	(15043144)	+	G-rich	Low_complexity	1	56	(0)	552538
17	17.2	0.0	5.9	chr10	118754402	118754452	(15042970)	+	(TGGAGG)n	Simple_repeat	1	51	(0)	552539
14	28.8	0.0	0.0	chr10	118754436	118754481	(15042941)	+	(GGC)n	Simple_repeat	1	46	(0)	552540
15	7.0	6.7	0.0	chr10	119030612	119030641	(14766781)	+	(CCGC)n	Simple_repeat	1	32	(0)	553074
15	3.3	5.4	7.7	chr10	119030642	119030647	(14766775)	+	(GCC)n	Simple_repeat	2	39	(0)	553075
22	24.7	2.8	5.5	chr10	119207688	119207703	(14589719)	+	GA-rich	Low_complexity	77	109	(0)	553464
31	0.0	0.0	0.0	chr10	119207706	119207734	(14589688)	+	(GCG)n	Simple_repeat	1	29	(0)	553466
23	11.7	0.0	5.8	chr10	119207811	119207863	(14589559)	+	(CGGCAG)n	Simple_repeat	1	49	(0)	553467
16	15.8	2.2	4.3	chr10	119208008	119208053	(14589369)	+	G-rich	Low_complexity	1	47	(0)	553468
2175	15.4	1.4	2.2	chr10	119433861	119434218	(14363204)	C	THE1B	LTR/ERVL-MaLR	(0)	355	1	553888
12189	8.2	0.9	0.8	chr10	119434219	119435796	(14361626)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	553888
14	19.3	1.6	7.9	chr10	119651591	119651652	(14145770)	+	(GCCCGC)n	Simple_repeat	1	63	(0)	554325
16	8.7	0.0	0.0	chr10	119726064	119726088	(14071334)	+	(GCC)n	Simple_repeat	1	25	(0)	554474
12	18.1	6.3	6.0	chr10	119872594	119872656	(13924766)	+	(GGCC)n	Simple_repeat	1	67	(0)	554723
26	20.4	2.6	2.5	chr10	119872895	119872905	(13924517)	+	(GCGCG)n	Simple_repeat	1	78	(0)	554724
19	15.8	9.2	1.4	chr10	119872906	119872970	(13924452)	+	(GGC)n	Simple_repeat	1	71	(0)	554725
17	14.9	4.2	4.0	chr10	120456901	120456948	(13340474)	+	(GGC)n	Simple_repeat	1	50	(0)	555677
23	18.9	1.9	0.0	chr10	120457144	120457197	(13340225)	+	(CCCGCC)n	Simple_repeat	1	55	(0)	555678
2268	11.2	1.4	1.1	chr10	121832420	121832772	(11964650)	+	THE1A	LTR/ERVL-MaLR	1	354	(1)	557774
2746	8.6	1.7	0.3	chr10	123056181	123056530	(10740892)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	559700
3784	11.6	2.1	0.2	chr10	123335662	123336264	(10461158)	+	L1PREC2	LINE/L1	2849	3463	(2683)	560146
2736	8.8	0.3	0.0	chr10	123336265	123336618	(10460804)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	560147
11813	8.9	0.8	0.2	chr10	123336627	123338173	(10459249)	C	THE1A-int	LTR/ERVL-MaLR	(24)	1556	1	560147
2821	7.4	0.3	0.0	chr10	123338174	123338523	(10458899)	C	THE1A	LTR/ERVL-MaLR	(0)	355	5	560147
1626	10.4	0.4	0.8	chr10	123338527	123338768	(10458654)	+	L1PREC2	LINE/L1	3458	3698	(2448)	560146
409	29.4	10.9	6.3	chr10	123996141	123996394	(9801028)	+	MIRb	SINE/MIR	1	267	(1)	561211
28	31.6	1.7	1.6	chr10	124093245	124093364	(9704058)	+	(GCC)n	Simple_repeat	1	122	(0)	561346
1890	8.1	1.1	0.4	chr10	124371704	124371965	(9425457)	+	THE1B	LTR/ERVL-MaLR	1	264	(100)	561786
529	7.1	9.7	1.2	chr10	124372098	124372182	(9425240)	+	THE1B	LTR/ERVL-MaLR	268	360	(4)	561786
3026	17.9	2.9	2.4	chr10	124570466	124570893	(9226529)	C	L1MB7	LINE/L1	(19)	6165	5736	562152
1987	12.6	10.7	3.6	chr10	124570894	124571230	(9226192)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	562153
3026	17.9	2.9	2.4	chr10	124571231	124571378	(9226044)	C	L1MB7	LINE/L1	(449)	5735	5586	562152
14	16.6	2.2	6.4	chr10	124744221	124744266	(9053156)	+	(GCC)n	Simple_repeat	1	47	(0)	562380
22	13.7	6.2	5.8	chr10	124744309	124744315	(9053107)	+	(GGCGGCA)n	Simple_repeat	1	18	(68)	562381
25	2.3	1.9	9.3	chr10	124744316	124744368	(9053054)	+	(GGC)n	Simple_repeat	1	54	(0)	562382
22	13.7	6.2	5.8	chr10	124744369	124744389	(9053033)	+	(GGCGGCA)n	Simple_repeat	19	86	(0)	562381
22	22.4	5.0	3.8	chr10	124744458	124744557	(9052865)	+	(GCCGCGC)n	Simple_repeat	1	105	(0)	562383
12	27.3	2.0	2.0	chr10	124916806	124916855	(8880567)	+	(GGC)n	Simple_repeat	1	51	(0)	562764
16	10.1	2.9	2.9	chr10	124917084	124917117	(8880305)	+	(GGC)n	Simple_repeat	1	35	(0)	562765
39	2.6	0.0	0.0	chr10	124917175	124917214	(8880208)	+	(CGC)n	Simple_repeat	1	40	(0)	562766
17	16.4	0.0	0.0	chr10	124917226	124917259	(8880163)	+	GA-rich	Low_complexity	1	34	(0)	562767
20	14.0	0.0	2.4	chr10	125160177	125160217	(8637205)	+	(CTC)n	Simple_repeat	1	41	(0)	563048
14	28.9	1.8	1.7	chr10	125160234	125160290	(8637132)	+	(GGC)n	Simple_repeat	1	58	(0)	563049
18	29.8	0.0	4.0	chr10	125160363	125160437	(8636985)	+	(GGC)n	Simple_repeat	1	75	(0)	563050
15	16.6	0.0	0.0	chr10	125160530	125160556	(8636866)	+	(AC)n	Simple_repeat	1	27	(0)	563051
2077	27.4	6.5	2.7	chr10	125885745	125886441	(7910981)	+	L2a	LINE/L2	2614	3340	(86)	564143
16	22.7	0.0	0.0	chr10	125896669	125896709	(7900713)	+	G-rich	Low_complexity	1	41	(0)	564165
2829	8.3	0.0	1.4	chr10	125990725	125991091	(7806331)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	564313
1920	14.6	8.4	0.8	chr10	127818089	127818440	(5978982)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	566668
236	32.4	10.4	10.4	chr10	127818441	127818670	(5978752)	+	L2b	LINE/L2	3131	3360	(15)	566667
40	16.6	2.8	7.5	chr10	129964367	129964434	(3832988)	+	(GCC)n	Simple_repeat	1	64	(0)	568928
30	0.0	2.4	4.8	chr10	129964435	129964475	(3832947)	+	(CCGCGAGCC)n	Simple_repeat	1	42	(0)	568929
40	16.6	2.8	7.5	chr10	129964476	129964548	(3832874)	+	(GCC)n	Simple_repeat	2	71	(0)	568930
18	24.5	0.0	4.8	chr10	130136409	130136471	(3660951)	+	(GGC)n	Simple_repeat	1	63	(0)	569159
19	18.0	5.2	1.6	chr10	130136516	130136573	(3660849)	+	G-rich	Low_complexity	1	61	(0)	569160
252	26.2	16.1	2.7	chr10	132330162	132330349	(1467073)	+	L1MEi	LINE/L1	1647	1864	(348)	571537
101	23.0	6.5	5.3	chr10	132364294	132364784	(1432638)	+	(CACTCA)n	Simple_repeat	1	557	(29)	571577
13	23.5	0.0	0.0	chr10	132364785	132364819	(1432603)	+	(CCCA)n	Simple_repeat	1	35	(0)	571578
101	23.0	6.5	5.3	chr10	132364820	132364843	(1432579)	+	(CACTCA)n	Simple_repeat	558	586	(0)	571577
11899	10.0	0.5	0.0	chr10	132599065	132600636	(1196786)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	571826
2896	7.1	0.3	0.0	chr10	132600638	132600990	(1196432)	C	THE1A	LTR/ERVL-MaLR	(1)	354	1	571826
215	29.0	1.4	0.7	chr10	133121336	133121620	(675802)	+	(GT)n	Simple_repeat	1	289	(0)	572179
27	3.4	7.6	4.2	chr10	133121621	133121686	(675736)	+	(TGTGTGCA)n	Simple_repeat	1	71	(0)	572180
215	29.0	1.4	0.7	chr10	133121687	133122063	(675359)	+	(GT)n	Simple_repeat	2	379	(0)	572181
1275	13.2	1.4	2.2	chr10	133493562	133493785	(303637)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	211	572569
2507	9.0	0.3	2.5	chr10	133493808	133494170	(303252)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	572570
11123	9.8	1.1	0.9	chr10	133494171	133495742	(301680)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	6	572570
4310	11.5	2.3	0.6	chr10	133599891	133600521	(196901)	+	LTR5B	LTR/ERVK	361	1002	(0)	572679
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
2400	5.8	0.3	0.3	chr11	518188	518481	(134568141)	C	AluY	SINE/Alu	(17)	294	1	573498
936	9.4	3.0	0.0	chr11	518496	518622	(134568000)	C	AluSx3	SINE/Alu	(180)	131	1	573499
19	23.2	2.4	5.8	chr11	576493	576576	(134510046)	+	(CGG)n	Simple_repeat	1	86	(0)	573583
17	19.5	3.5	3.4	chr11	576689	576745	(134509877)	+	G-rich	Low_complexity	1	59	(0)	573584
15	0.0	5.3	10.0	chr11	798219	798256	(134288366)	+	(CGC)n	Simple_repeat	1	40	(0)	573957
12	25.6	3.4	3.3	chr11	798287	798345	(134288277)	+	(TCCGCCC)n	Simple_repeat	1	61	(0)	573958
13	9.9	2.6	7.7	chr11	842875	842912	(134243710)	+	(GCG)n	Simple_repeat	1	39	(0)	574013
18	16.2	4.0	1.9	chr11	843048	843097	(134243525)	+	G-rich	Low_complexity	1	52	(0)	574014
2543	6.6	1.9	0.0	chr11	912563	912867	(134173755)	+	AluY	SINE/Alu	1	311	(0)	574082
417	33.3	5.7	5.5	chr11	943580	943726	(134142896)	C	L2b	LINE/L2	(626)	2793	2659	574149
13	28.7	0.0	0.0	chr11	1017643	1017684	(134068938)	+	(TGG)n	Simple_repeat	1	42	(0)	574242
1967	12.6	2.1	1.2	chr11	1264402	1264730	(133821892)	C	THE1D	LTR/ERVL-MaLR	(0)	381	50	574419
2630	7.0	2.8	0.6	chr11	1264731	1265077	(133821545)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	574420
11753	10.1	0.4	1.9	chr11	1265078	1266243	(133820379)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	439	574420
501	34.5	8.3	4.8	chr11	1588964	1589499	(133497123)	C	L1MEd	LINE/L1	(4934)	2169	1614	574787
1310	18.0	0.5	0.0	chr11	1589865	1590075	(133496547)	C	AluJr	SINE/Alu	(100)	212	1	574789
13	25.9	3.4	3.3	chr11	2270169	2270228	(132816394)	+	(CGC)n	Simple_repeat	1	60	(0)	575608
24	7.7	2.3	2.2	chr11	2992031	2992074	(132094548)	+	(CCAGGCC)n	Simple_repeat	1	45	(0)	576411
1342	12.7	1.3	0.4	chr11	3063720	3063949	(132022673)	+	THE1A	LTR/ERVL-MaLR	1	232	(123)	576514
4901	8.4	3.5	0.0	chr11	3063947	3064671	(132021951)	C	THE1A-int	LTR/ERVL-MaLR	(827)	753	3	576515
953	7.0	0.0	0.0	chr11	3064673	3064800	(132021822)	C	THE1A	LTR/ERVL-MaLR	(0)	355	228	576515
780	5.5	0.0	0.0	chr11	3064801	3064891	(132021731)	C	AluSq	SINE/Alu	(8)	305	215	576516
1315	12.9	2.1	0.4	chr11	3064892	3065124	(132021498)	C	THE1A	LTR/ERVL-MaLR	(118)	237	1	576515
7817	15.8	3.4	3.9	chr11	3179717	3180080	(131906542)	C	Ricksha_c	DNA/MULE-MuDR	(320)	1728	1364	576676
2867	6.2	0.6	0.3	chr11	3180081	3180434	(131906188)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	576679
7817	15.8	3.4	3.9	chr11	3180435	3181332	(131905290)	C	Ricksha_c	DNA/MULE-MuDR	(685)	1363	455	576676
41931	6.6	0.7	0.8	chr11	3474026	3479237	(131607385)	C	HERVE-int	LTR/ERV1	(1)	7812	2611	577090
18	7.8	0.0	0.0	chr11	4187448	4187474	(130899148)	+	(GCG)n	Simple_repeat	1	27	(0)	578501
6021	8.0	3.1	0.7	chr11	5928773	5929601	(129157021)	+	HERV-Fc2-int	LTR/ERV1	1	802	(3827)	580645
7797	24.2	1.5	2.3	chr11	5929745	5933737	(129152885)	+	HERV-Fc2-int	LTR/ERV1	820	4696	(2554)	580645
17	12.0	4.8	7.6	chr11	6234639	6234701	(128851921)	+	(CCGCGCC)n	Simple_repeat	1	66	(0)	580991
561	30.0	7.4	2.7	chr11	6419539	6419757	(128666865)	C	MIRb	SINE/MIR	(1)	267	38	581293
305	32.0	20.8	2.4	chr11	6770148	6770397	(128316225)	C	L2b	LINE/L2	(1)	3374	3067	581776
232	21.1	7.1	0.0	chr11	8676819	8676870	(126409752)	C	Charlie8	DNA/hAT-Charlie	(4)	2424	2369	584328
12	14.2	7.3	2.3	chr11	8676940	8676980	(126409642)	+	A-rich	Low_complexity	1	44	(0)	584329
1895	14.1	0.0	3.7	chr11	8841367	8841664	(126244958)	+	AluJo	SINE/Alu	11	297	(15)	584601
31	7.2	2.3	0.0	chr11	8870482	8870525	(126216097)	+	(GT)n	Simple_repeat	1	45	(0)	584651
15	27.3	3.2	1.5	chr11	8871239	8871301	(126215321)	+	GA-rich	Low_complexity	1	65	(0)	584652
31	0.0	0.0	0.0	chr11	9004116	9004144	(126082478)	+	(CGCGTCC)n	Simple_repeat	1	29	(0)	584871
11	20.5	5.1	0.0	chr11	9461144	9461182	(125625440)	+	(CGGCTC)n	Simple_repeat	1	41	(0)	585847
21	6.9	0.0	0.0	chr11	9574033	9574063	(125512559)	+	(GAG)n	Simple_repeat	1	31	(0)	586107
11	25.1	0.0	4.3	chr11	10735663	10735708	(124350914)	+	(CCCCCCT)n	Simple_repeat	1	46	(0)	588042
16	22.1	6.8	0.0	chr11	10808762	10808820	(124277802)	+	A-rich	Low_complexity	1	63	(0)	588158
23	14.0	2.1	0.0	chr11	10858202	10858248	(124228374)	+	(AGCCGC)n	Simple_repeat	1	48	(0)	588254
269	28.5	7.5	6.1	chr11	10858288	10858418	(124228204)	C	MER5A	DNA/hAT-Charlie	(0)	189	57	588255
15	31.9	2.1	7.0	chr11	10931608	10931747	(124154875)	+	G-rich	Low_complexity	1	143	(0)	588402
19	25.9	0.0	1.8	chr11	11841953	11842009	(123244613)	+	(GGC)n	Simple_repeat	1	57	(0)	589842
2543	20.5	8.1	5.9	chr11	12300307	12300892	(122785730)	+	MLT1E1A	LTR/ERVL-MaLR	73	680	(0)	590577
902	21.3	3.4	4.2	chr11	12300893	12300934	(122785688)	C	L1ME3	LINE/L1	(254)	5908	5869	590576
2803	6.8	0.3	0.3	chr11	12300935	12301289	(122785333)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	590579
902	21.3	3.4	4.2	chr11	12301290	12301511	(122785111)	C	L1ME3	LINE/L1	(294)	5868	5646	590576
22	12.4	2.2	2.1	chr11	12377459	12377504	(122709118)	+	GA-rich	Low_complexity	1	47	(0)	590686
11	24.6	4.0	1.9	chr11	12377559	12377608	(122709014)	+	(AGCCGC)n	Simple_repeat	1	52	(0)	590687
18	23.7	4.9	1.6	chr11	12377862	12377922	(122708700)	+	(CG)n	Simple_repeat	1	64	(0)	590688
692	32.4	0.8	2.5	chr11	12510356	12510515	(122576107)	C	MIR	SINE/MIR	(18)	244	90	590891
2486	8.8	0.8	3.0	chr11	12510516	12510878	(122575744)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	590892
692	32.4	0.8	2.5	chr11	12510879	12510958	(122575664)	C	MIR	SINE/MIR	(173)	89	8	590891
273	18.2	8.3	1.5	chr11	14041337	14041403	(121045219)	C	L2a	LINE/L2	(1)	3425	3354	593231
13	30.2	0.0	6.9	chr11	14644665	14644751	(120441871)	+	(TGGTGC)n	Simple_repeat	1	87	(0)	594298
12	22.1	6.4	0.0	chr11	17207842	17207888	(117878734)	+	(CCTCAG)n	Simple_repeat	1	50	(0)	598286
13	6.3	8.1	5.0	chr11	17476570	17476606	(117610016)	+	(CCT)n	Simple_repeat	1	40	(0)	598820
22	27.5	3.2	4.7	chr11	17476825	17476948	(117609674)	+	(CCCCG)n	Simple_repeat	1	128	(0)	598821
958	21.2	3.3	4.5	chr11	18243816	18244062	(116842560)	+	LTR41C	LTR/ERVL	1	244	(457)	600102
2374	7.3	3.4	11.6	chr11	18482957	18483212	(116603410)	+	THE1A	LTR/ERVL-MaLR	1	236	(119)	600617
2386	10.0	1.6	0.3	chr11	18483213	18483511	(116603111)	+	AluSq2	SINE/Alu	1	303	(10)	600618
408	31.2	7.6	7.9	chr11	21903893	21903975	(113182647)	+	L2c	LINE/L2	3033	3104	(283)	606179
1886	15.6	6.1	1.1	chr11	21903976	21904331	(113182291)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	606180
408	31.2	7.6	7.9	chr11	21904332	21904602	(113182020)	+	L2c	LINE/L2	3105	3385	(2)	606179
13	19.4	0.0	5.1	chr11	22193319	22193357	(112893265)	+	GA-rich	Low_complexity	1	39	(0)	606581
2324	11.9	0.8	0.8	chr11	22599836	22600190	(112486432)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	607209
4505	15.0	3.5	0.7	chr11	24000002	24000738	(111085884)	C	THE1B-int	LTR/ERVL-MaLR	(870)	761	3	609105
2358	14.1	0.6	0.0	chr11	24000741	24001102	(111085520)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	609105
4630	17.3	1.9	0.2	chr11	24001103	24002012	(111084610)	+	L1P4	LINE/L1	4422	5347	(799)	609106
372	36.2	3.7	4.5	chr11	25932248	25932285	(109154337)	+	MIRb	SINE/MIR	3	41	(227)	611714
2034	14.2	6.9	1.4	chr11	25932286	25932629	(109153993)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	611715
372	36.2	3.7	4.5	chr11	25932630	25932810	(109153812)	+	MIRb	SINE/MIR	42	220	(48)	611714
1974	13.8	4.4	3.1	chr11	31281576	31281934	(103804688)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	619745
911	28.7	13.8	2.0	chr11	31862293	31862641	(103223981)	+	MLT1J	LTR/ERVL-MaLR	4	408	(104)	620514
1974	13.0	5.8	2.2	chr11	31862642	31863004	(103223618)	+	THE1D	LTR/ERVL-MaLR	5	381	(0)	620515
722	26.1	7.9	1.4	chr11	32051947	32052230	(103034392)	+	L1ME4a	LINE/L1	5818	6121	(3)	620906
4146	13.6	5.8	1.1	chr11	32227433	32227805	(102858817)	+	L1MB7	LINE/L1	5147	5562	(622)	621220
2095	14.0	3.9	3.3	chr11	32227806	32228098	(102858524)	+	THE1B	LTR/ERVL-MaLR	1	298	(66)	621221
2431	0.4	0.0	0.0	chr11	32228099	32228381	(102858241)	C	AluYa5	SINE/Alu	(0)	311	33	621222
2180	11.9	5.5	7.5	chr11	32607766	32608137	(102478485)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	621945
12	16.5	5.9	0.0	chr11	32892771	32892804	(102193818)	+	(GGCGG)n	Simple_repeat	1	36	(0)	622439
2419	9.0	0.3	0.3	chr11	33159314	33159623	(101926999)	+	AluSx1	SINE/Alu	1	310	(2)	622923
1623	15.8	1.8	4.1	chr11	33159624	33159771	(101926851)	+	AluJb	SINE/Alu	137	284	(28)	622922
548	28.6	13.6	6.0	chr11	33159772	33159905	(101926717)	+	L1MC5a	LINE/L1	2629	2763	(14)	622921
19	20.9	5.9	1.4	chr11	33257311	33257378	(101829244)	+	(GGCGGA)n	Simple_repeat	1	72	(0)	623167
19	0.0	3.3	3.2	chr11	33257658	33257687	(101828935)	+	(AGC)n	Simple_repeat	1	31	(0)	623168
1945	16.4	4.2	1.4	chr11	33989028	33989397	(101097225)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	624457
844	27.0	14.0	7.0	chr11	34067937	34068482	(101018140)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	5	624628
14	14.6	0.0	3.1	chr11	34357915	34357946	(100728676)	+	(GGC)n	Simple_repeat	1	32	(0)	625127
13	20.1	0.0	7.5	chr11	34357947	34357967	(100728655)	+	(GGAGGC)n	Simple_repeat	1	53	(0)	625128
23	26.6	3.5	1.1	chr11	34358179	34358265	(100728357)	+	G-rich	Low_complexity	1	90	(0)	625129
304	36.7	5.5	8.1	chr11	34723065	34723384	(100363238)	C	L2c	LINE/L2	(9)	3378	3068	625735
16	19.6	0.0	0.0	chr11	34723443	34723472	(100363150)	+	A-rich	Low_complexity	1	30	(0)	625736
2694	8.7	0.0	0.3	chr11	34723557	34723912	(100362710)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	625737
1121	10.5	13.0	10.9	chr11	35544053	35544287	(99542335)	C	MER44A	DNA/TcMar-Tigger	(75)	264	23	626915
2248	11.2	3.8	4.6	chr11	35544288	35544654	(99541968)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	626916
1121	10.5	13.0	10.9	chr11	35544655	35544674	(99541948)	C	MER44A	DNA/TcMar-Tigger	(317)	22	3	626915
18	3.7	0.0	6.2	chr11	35662600	35662631	(99423991)	+	(TCC)n	Simple_repeat	1	32	(0)	627134
1871	11.9	9.6	1.2	chr11	35770689	35771011	(99315611)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	627306
11678	8.3	0.8	2.7	chr11	35771014	35771449	(99315173)	+	THE1-int	LTR/ERVL-MaLR	1	429	(1151)	627307
376	28.0	16.8	1.2	chr11	36073916	36074085	(99012537)	+	MIRb	SINE/MIR	58	259	(9)	627810
25	21.4	0.0	0.0	chr11	36309951	36310005	(98776617)	+	(CCA)n	Simple_repeat	1	55	(0)	628227
595	9.2	0.0	0.0	chr11	36338738	36338813	(98747809)	C	AluSx	SINE/Alu	(23)	289	214	628282
2495	10.8	0.6	2.5	chr11	36338814	36339175	(98747447)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	628283
1561	13.8	0.0	0.0	chr11	36339176	36339393	(98747229)	C	AluSx	SINE/Alu	(94)	218	1	628282
6021	16.2	3.0	4.8	chr11	41162420	41162903	(93923719)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	744	635002
2007	14.0	1.1	3.3	chr11	41162904	41163264	(93923358)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	635003
6021	16.2	3.0	4.8	chr11	41163265	41163284	(93923338)	C	Tigger3b	DNA/TcMar-Tigger	(488)	743	727	635002
2151	14.4	0.0	0.0	chr11	41163285	41163582	(93923040)	C	AluSx1	SINE/Alu	(13)	299	2	635004
15	19.9	3.5	5.1	chr11	43942623	43942679	(91143943)	+	(GGC)n	Simple_repeat	1	59	(0)	639240
37	5.7	0.0	4.9	chr11	44309714	44309774	(90776848)	+	(GCGGCT)n	Simple_repeat	1	61	(0)	639876
28	14.0	8.7	3.0	chr11	44310180	44310213	(90776409)	+	(CCTCTC)n	Simple_repeat	1	34	(0)	639877
35	16.1	3.5	0.0	chr11	44310214	44310330	(90776292)	+	(CT)n	Simple_repeat	1	121	(0)	639878
28	14.0	8.7	3.0	chr11	44310277	44310333	(90776289)	+	(CCTCTC)n	Simple_repeat	5	67	(0)	639879
6238	7.2	0.2	0.0	chr11	44477006	44477807	(90608815)	+	THE1A-int	LTR/ERVL-MaLR	777	1580	(0)	640191
2524	11.1	0.6	0.8	chr11	44477808	44478163	(90608459)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	640191
1254	24.1	4.2	4.9	chr11	44478165	44478595	(90608027)	C	L1MC5a	LINE/L1	(38)	2739	2312	640192
672	24.3	15.5	0.5	chr11	45655061	45655263	(89431359)	+	MIR	SINE/MIR	23	261	(1)	642535
14	9.3	0.0	0.0	chr11	46277838	46277860	(88808762)	+	(AGG)n	Simple_repeat	1	23	(0)	643664
17	16.6	7.3	0.0	chr11	46347517	46347557	(88739065)	+	(GC)n	Simple_repeat	1	44	(0)	643816
16	8.0	0.0	3.5	chr11	46826822	46826850	(88259772)	+	(CGG)n	Simple_repeat	1	29	(0)	644711
310	25.9	2.3	0.0	chr11	46927031	46927115	(88159507)	C	X7B_LINE	LINE/CR1	(26)	224	138	644921
2707	6.1	0.0	0.3	chr11	46927129	46927471	(88159151)	+	THE1A	LTR/ERVL-MaLR	14	355	(0)	644922
12422	8.1	0.6	0.2	chr11	46927472	46929046	(88157576)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	644922
2791	7.1	0.6	0.0	chr11	46929047	46929399	(88157223)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	644922
31	0.0	3.0	0.0	chr11	47408554	47408586	(87678036)	+	(GGCCGGGC)n	Simple_repeat	1	34	(0)	645844
21	16.7	4.7	3.0	chr11	47980765	47980835	(87105787)	+	(GGCGGA)n	Simple_repeat	1	72	(0)	647277
12	18.2	4.6	7.3	chr11	47980942	47980959	(87105663)	+	(GCCTGC)n	Simple_repeat	1	42	(26)	647278
21	5.5	7.9	0.0	chr11	47980960	47980997	(87105625)	+	(GCT)n	Simple_repeat	1	41	(0)	647279
12	18.2	4.6	7.3	chr11	47980998	47981006	(87105616)	+	(GCCTGC)n	Simple_repeat	43	68	(0)	647278
5237	23.3	8.7	6.3	chr11	57410449	57410704	(77675918)	+	L1MC5a	LINE/L1	446	692	(2085)	653640
2835	7.3	0.0	0.8	chr11	57410705	57411062	(77675560)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	653641
5237	22.8	9.2	6.6	chr11	57411063	57411356	(77675266)	+	L1MC5a	LINE/L1	693	1008	(1769)	653640
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
670	1.4	0.0	0.0	chr11	59550986	59551059	(75535563)	C	tRNA-Val-GTA	tRNA	(2)	74	1	656946
682	0.0	0.0	0.0	chr11	59566380	59566452	(75520170)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	656983
13	5.2	0.0	0.0	chr11	59566628	59566647	(75519975)	+	(TTG)n	Simple_repeat	1	20	(0)	656984
351	27.8	7.5	6.8	chr11	59566657	59566907	(75519715)	C	L1ME3G	LINE/L1	(286)	638	386	656985
17	15.3	0.0	2.6	chr11	59668818	59668855	(75417767)	+	GA-rich	Low_complexity	1	38	(0)	657193
20	8.8	0.0	5.0	chr11	59668900	59668939	(75417683)	+	(GGGGAG)n	Simple_repeat	1	40	(0)	657194
2402	8.1	2.6	0.0	chr11	60755235	60755532	(74331090)	C	AluY	SINE/Alu	(5)	306	1	658808
972	21.9	1.8	10.0	chr11	60755533	60755566	(74331056)	+	MER58A	DNA/hAT-Charlie	195	221	(3)	658806
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
18	14.6	2.0	5.8	chr11	61429397	61429447	(73657175)	+	(GCCCC)n	Simple_repeat	1	52	(0)	660144
11	27.6	0.0	0.0	chr11	61429967	61430005	(73656617)	+	(CCGCCCC)n	Simple_repeat	1	39	(0)	660145
12	17.7	5.0	2.4	chr11	61509041	61509080	(73577542)	+	(GCA)n	Simple_repeat	1	42	(0)	660335
33	23.1	3.2	3.9	chr11	61752508	61752632	(73333990)	+	G-rich	Low_complexity	1	129	(0)	660789
20	8.1	2.3	4.5	chr11	63671527	63671569	(71415053)	+	(CGAGG)n	Simple_repeat	1	44	(0)	664137
11	10.0	5.6	5.3	chr11	63681455	63681490	(71405132)	+	(CGCGCT)n	Simple_repeat	1	38	(0)	664163
18	20.6	5.2	1.6	chr11	64060938	64060995	(71025627)	+	(GCG)n	Simple_repeat	1	61	(0)	664936
451	24.8	18.2	4.1	chr11	65016220	65016460	(70070162)	C	L2a	LINE/L2	(289)	3137	2845	666672
355	16.9	4.9	0.0	chr11	65016471	65016547	(70070075)	C	L2a	LINE/L2	(676)	2743	2663	666672
258	32.0	6.8	4.9	chr11	65016549	65016834	(70069788)	C	L2-1_AMi	LINE/L2	(628)	607	316	666675
891	30.2	6.0	2.4	chr11	65016854	65017186	(70069436)	C	L2a	LINE/L2	(1254)	2165	1818	666672
233	28.4	6.0	7.8	chr11	65887758	65887910	(69198712)	+	MIR3	SINE/MIR	18	167	(41)	668354
12	10.5	0.0	10.5	chr11	65890604	65890641	(69195981)	+	(GCCCC)n	Simple_repeat	1	38	(0)	668358
15	14.5	5.3	0.0	chr11	65890689	65890726	(69195896)	+	(CGGAGC)n	Simple_repeat	1	40	(0)	668359
13	15.9	2.6	5.0	chr11	65890858	65890896	(69195726)	+	(GCG)n	Simple_repeat	1	40	(0)	668360
284	27.9	9.6	3.9	chr11	65918663	65918789	(69167833)	C	MIRc	SINE/MIR	(87)	181	47	668432
22	24.2	1.9	6.5	chr11	65919124	65919228	(69167394)	+	G-rich	Low_complexity	1	107	(0)	668433
418	17.7	12.8	7.3	chr11	66744161	66744309	(68342313)	C	MER53	DNA/hAT	(29)	164	3	670142
35	24.7	2.6	5.1	chr11	66744642	66744682	(68341940)	+	(GGCGCG)n	Simple_repeat	1	64	(92)	670144
18	22.6	0.0	3.6	chr11	66744683	66744737	(68341885)	+	(GCGG)n	Simple_repeat	1	55	(0)	670145
35	24.7	2.6	5.1	chr11	66744738	66744793	(68341829)	+	(GGCGCG)n	Simple_repeat	65	156	(0)	670144
28	0.0	0.0	0.0	chr11	66744820	66744845	(68341777)	+	(GGC)n	Simple_repeat	1	26	(0)	670146
26	0.0	0.0	0.0	chr11	67266652	67266676	(67819946)	+	(GCG)n	Simple_repeat	1	25	(0)	671333
284	27.4	17.1	1.9	chr11	67317104	67317207	(67769415)	C	MIR3	SINE/MIR	(56)	152	30	671397
2157	11.5	4.5	0.0	chr11	67550532	67550827	(67535795)	+	AluSz	SINE/Alu	3	312	(0)	671862
1987	12.2	5.0	7.0	chr11	67550828	67551036	(67535586)	+	THE1D	LTR/ERVL-MaLR	180	381	(0)	671861
268	36.5	4.2	0.6	chr11	67582472	67582653	(67503969)	+	L1M5	LINE/L1	5132	5320	(826)	671933
2233	11.1	1.7	0.6	chr11	67582666	67583019	(67503603)	+	L1PA11	LINE/L1	5807	6164	(10)	671934
1981	8.3	2.1	1.1	chr11	67583021	67583297	(67503325)	+	AluSx	SINE/Alu	1	280	(32)	671935
781	12.1	7.5	1.6	chr11	67839209	67839334	(67247288)	C	THE1B	LTR/ERVL-MaLR	(35)	329	196	672346
39	0.0	0.0	0.0	chr11	67839445	67839480	(67247142)	+	(TGA)n	Simple_repeat	1	36	(0)	672347
63131	6.7	0.4	0.7	chr11	67845655	67853485	(67233137)	C	HERVE-int	LTR/ERV1	(1)	7812	3	672354
225	27.5	5.5	0.0	chr11	68014646	68014714	(67071908)	C	MIR1_Amn	SINE/MIR	(60)	170	98	672622
38	23.0	1.8	1.8	chr11	68120913	68121022	(66965600)	+	(GCGGCG)n	Simple_repeat	1	112	(0)	672797
30	12.0	4.5	2.9	chr11	68121277	68121343	(66965279)	+	(CGG)n	Simple_repeat	1	70	(0)	672798
15	19.1	0.0	2.6	chr11	68684520	68684557	(66402065)	+	(GCG)n	Simple_repeat	1	38	(0)	673797
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
439	28.7	0.0	1.0	chr11	70397525	70397626	(64688996)	+	SVA_A	Retroposon/SVA	215	315	(1072)	676803
786	13.6	0.0	0.0	chr11	70397536	70397645	(64688977)	C	AluJr	SINE/Alu	(202)	110	1	676804
367	32.7	8.4	6.4	chr11	70397654	70398136	(64688486)	+	L2c	LINE/L2	2821	3316	(71)	676802
2675	9.9	0.3	0.3	chr11	72378272	72378626	(62707996)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	679846
17	8.2	0.0	0.0	chr11	73597946	73597971	(61488651)	+	(CGG)n	Simple_repeat	1	26	(0)	682197
14	29.5	0.0	4.5	chr11	73598110	73598176	(61488446)	+	G-rich	Low_complexity	1	67	(0)	682198
20	7.2	0.0	0.0	chr11	73761139	73761168	(61325454)	+	(GCGT)n	Simple_repeat	1	30	(0)	682608
206	25.9	13.8	1.2	chr11	73788257	73788338	(61298284)	+	MIR3	SINE/MIR	15	108	(100)	682676
16	11.6	2.4	4.8	chr11	73982881	73982921	(61103701)	+	G-rich	Low_complexity	1	42	(0)	683165
1002	21.3	0.0	0.0	chr11	74199470	74199638	(60886984)	C	FAM	SINE/Alu	(16)	169	1	683624
2158	12.0	4.1	3.1	chr11	74199666	74200025	(60886597)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	683625
24	17.3	1.6	3.2	chr11	74398449	74398510	(60688112)	+	(CCGCCC)n	Simple_repeat	1	63	(0)	683975
15	22.6	3.3	3.2	chr11	74493319	74493378	(60593244)	+	(GCACGC)n	Simple_repeat	1	62	(0)	684201
185	26.2	0.0	0.0	chr11	74860123	74860164	(60226458)	C	L2b	LINE/L2	(5)	3370	3329	684935
12	21.0	10.0	0.0	chr11	74988963	74989022	(60097600)	+	(GTCTCC)n	Simple_repeat	1	66	(0)	685136
16	25.3	4.5	1.4	chr11	75668021	75668087	(59418535)	+	G-rich	Low_complexity	1	70	(0)	686537
34	2.8	0.0	0.0	chr11	75815232	75815268	(59271354)	+	(CAGCGGCGG)n	Simple_repeat	1	37	(0)	686819
614	2.7	0.0	0.0	chr11	76235824	76235896	(58850726)	C	tRNA-Pro-CCA	tRNA	(2)	73	1	687582
1543	10.4	21.4	3.5	chr11	76790509	76790797	(58295825)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	688688
2663	7.9	0.6	2.5	chr11	76792492	76792853	(58293769)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	688688
397	29.4	3.7	0.1	chr11	76792881	76793018	(58293604)	+	MIRb	SINE/MIR	75	223	(45)	688689
13	10.7	3.1	3.0	chr11	79440145	79440176	(55646446)	+	(GACCGG)n	Simple_repeat	1	33	(0)	693941
16	17.9	5.8	1.8	chr11	79440203	79440254	(55646368)	+	(CCTC)n	Simple_repeat	1	55	(0)	693942
30	3.4	0.0	0.0	chr11	79440853	79440882	(55645740)	+	(GT)n	Simple_repeat	1	30	(0)	693943
2631	8.3	1.1	0.0	chr11	81839857	81840206	(53246416)	C	THE1A	LTR/ERVL-MaLR	(1)	354	1	697994
2039	10.9	6.3	1.1	chr11	82729891	82730251	(52356371)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	699377
2726	7.4	0.6	0.0	chr11	82876457	82876809	(52209813)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	699635
12107	8.2	0.5	0.0	chr11	82876810	82878379	(52208243)	+	THE1A-int	LTR/ERVL-MaLR	1	1578	(2)	699635
218	28.4	3.9	0.0	chr11	85854743	85854816	(49231806)	C	MIR3	SINE/MIR	(47)	161	85	704507
6228	10.5	0.1	0.1	chr11	90602986	90603846	(44482776)	+	THE1A-int	LTR/ERVL-MaLR	1	861	(719)	711662
2443	9.7	4.0	0.0	chr11	90603864	90604204	(44482418)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	711662
872	26.5	8.2	1.9	chr11	93064239	93064643	(42021979)	+	L1MC4	LINE/L1	7102	7495	(547)	715072
496	31.3	8.6	3.4	chr11	93064644	93064742	(42021880)	C	MER39	LTR/ERV1	(0)	542	438	715073
2031	12.9	1.7	6.7	chr11	93064743	93065116	(42021506)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	715074
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
15	20.5	0.0	2.4	chr11	94544397	94544437	(40542185)	+	(CAGCGG)n	Simple_repeat	1	41	(0)	717312
15	25.8	0.0	3.7	chr11	94544528	94544581	(40542041)	+	(CGG)n	Simple_repeat	1	54	(0)	717313
921	22.9	0.0	1.6	chr11	94774575	94774760	(40311862)	C	MER5A	DNA/hAT-Charlie	(0)	189	7	717656
219	28.5	0.0	5.5	chr11	94775037	94775145	(40311477)	+	MIRc	SINE/MIR	139	248	(20)	717657
16	23.0	3.9	0.0	chr11	95089758	95089808	(39996814)	+	(CCCGC)n	Simple_repeat	1	53	(0)	718109
18	16.8	0.0	2.4	chr11	95090163	95090204	(39996418)	+	(CCGCGCC)n	Simple_repeat	1	42	(0)	718110
14	26.1	0.0	0.0	chr11	95231044	95231084	(39855538)	+	(GCG)n	Simple_repeat	1	41	(0)	718308
28	29.4	3.5	0.8	chr11	95231152	95231265	(39855357)	+	(GCC)n	Simple_repeat	1	118	(0)	718309
2186	12.9	0.6	0.3	chr11	99663187	99663497	(35423125)	+	AluSx1	SINE/Alu	1	312	(0)	724111
730	24.0	10.7	2.8	chr11	99663498	99663534	(35423088)	C	MER33	DNA/hAT-Charlie	(78)	246	210	724110
1687	14.6	8.8	2.3	chr11	99663535	99663884	(35422738)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	724112
730	20.2	9.4	2.2	chr11	99663885	99664072	(35422550)	C	MER33	DNA/hAT-Charlie	(115)	209	2	724110
2454	7.8	0.0	0.3	chr11	100786997	100787291	(34299331)	+	AluY	SINE/Alu	2	295	(16)	725517
1778	15.1	7.9	2.8	chr11	100787292	100787490	(34299132)	+	THE1D	LTR/ERVL-MaLR	178	381	(0)	725516
1405	27.2	3.6	1.8	chr11	101690200	101690256	(33396366)	C	L1MEc	LINE/L1	(3457)	2862	2811	726721
2373	11.1	1.1	0.3	chr11	101690257	101690608	(33396014)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	726722
14	20.9	4.3	2.0	chr11	102110476	102110522	(32976100)	+	GA-rich	Low_complexity	1	49	(0)	727405
18	21.2	4.8	1.5	chr11	102110645	102110706	(32975916)	+	(GGAGGC)n	Simple_repeat	1	65	(0)	727406
2694	9.3	0.0	0.0	chr11	102126306	102126660	(32959962)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	727430
11492	8.7	2.0	0.1	chr11	102126661	102128207	(32958415)	+	THE1A-int	LTR/ERVL-MaLR	1	1578	(2)	727430
2724	8.7	0.0	0.6	chr11	102128210	102128566	(32958056)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	727430
14	17.9	0.0	4.8	chr11	103109529	103109570	(31977052)	+	(CTTCCCC)n	Simple_repeat	1	42	(0)	729012
1900	12.4	1.4	1.1	chr11	104822053	104822327	(30264295)	C	AluSq2	SINE/Alu	(2)	311	36	731446
2533	9.5	1.7	0.0	chr11	104822361	104822709	(30263913)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	731447
471	30.7	15.3	2.2	chr11	106101564	106101911	(28984711)	+	LTR33	LTR/ERVL	120	515	(0)	733117
183	27.7	0.0	6.0	chr11	107017228	107017277	(28069345)	+	X6B_LINE	LINE/CR1	871	917	(155)	734322
27	26.1	0.0	0.0	chr11	107017833	107017905	(28068717)	+	(CGGCAG)n	Simple_repeat	1	73	(0)	734323
19	19.8	4.5	2.9	chr11	107018062	107018128	(28068494)	+	(GGCGGA)n	Simple_repeat	1	70	(0)	734324
19	26.0	1.2	4.9	chr11	107018305	107018384	(28068238)	+	(GCC)n	Simple_repeat	1	81	(0)	734325
1145	27.8	8.0	3.6	chr11	109803763	109803859	(25282763)	+	L1MD2	LINE/L1	5341	5445	(999)	738820
2596	10.4	0.3	0.3	chr11	109803860	109804214	(25282408)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	738821
11118	11.2	0.9	0.0	chr11	109804215	109805780	(25280842)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	738821
17	14.4	0.0	4.8	chr11	110092915	110092956	(24993666)	+	(GCGG)n	Simple_repeat	1	42	(0)	739265
13	15.8	0.0	7.3	chr11	110093511	110093551	(24993071)	+	G-rich	Low_complexity	1	41	(0)	739266
1978	12.6	6.6	3.3	chr11	114722119	114722486	(20364136)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	746605
46	0.0	0.0	0.0	chr11	115975836	115975874	(19110748)	+	(GT)n	Simple_repeat	1	39	(0)	748511
15	0.0	0.0	0.0	chr11	115975875	115975891	(19110731)	+	(CG)n	Simple_repeat	1	17	(0)	748512
15	6.5	5.9	2.8	chr11	116174653	116174686	(18911936)	+	(CCCCT)n	Simple_repeat	1	36	(0)	748815
349	26.2	5.4	5.4	chr11	116174728	116174856	(18911766)	+	L2b	LINE/L2	3241	3369	(6)	748816
3685	7.1	0.4	0.0	chr11	117405619	117406113	(17680509)	C	THE1A-int	LTR/ERVL-MaLR	(1083)	497	1	751108
2392	11.6	0.8	3.3	chr11	117406114	117406477	(17680145)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	751108
2223	9.6	0.0	1.0	chr11	118192492	118192782	(16893840)	C	AluYc	SINE/Alu	(11)	288	1	752484
2305	11.4	0.8	4.6	chr11	118192783	118193103	(16893519)	+	THE1A	LTR/ERVL-MaLR	37	355	(0)	752483
8231	8.6	0.6	2.2	chr11	118193104	118193499	(16893123)	C	L1PB1	LINE/L1	(1581)	4565	4169	752479
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
353	30.4	21.0	0.6	chr11	118635582	118635763	(16450859)	+	MIR	SINE/MIR	34	262	(0)	753266
16	21.8	3.6	1.8	chr11	118790981	118791035	(16295587)	+	(CCCGCC)n	Simple_repeat	1	57	(0)	753566
17	19.5	5.1	6.0	chr11	118791133	118791211	(16295411)	+	(TCGC)n	Simple_repeat	1	83	(0)	753567
21	31.8	3.5	1.7	chr11	119094730	119094845	(15991777)	+	G-rich	Low_complexity	1	120	(0)	754243
14	25.2	3.5	1.7	chr11	119729178	119729235	(15357387)	+	(CGCTCT)n	Simple_repeat	1	60	(0)	755357
20	25.3	0.0	0.0	chr11	120325238	120325300	(14761322)	+	(CCTCCG)n	Simple_repeat	1	63	(0)	756368
30	26.3	3.4	2.4	chr11	121452144	121452171	(13634451)	+	(CGGCG)n	Simple_repeat	1	49	(74)	758140
19	17.6	5.9	0.0	chr11	121452172	121452222	(13634400)	+	(GGC)n	Simple_repeat	1	54	(0)	758141
30	26.3	3.4	2.4	chr11	121452223	121452262	(13634360)	+	(CGGCG)n	Simple_repeat	50	123	(0)	758140
1029	16.7	14.0	10.9	chr11	125525332	125525366	(9561256)	+	LTR48	LTR/ERV1	4	35	(752)	764682
2152	11.1	5.8	1.1	chr11	125525367	125525729	(9560893)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	764683
1029	16.7	14.0	10.9	chr11	125525730	125525874	(9560748)	+	LTR48	LTR/ERV1	36	202	(585)	764682
17	12.7	0.0	5.3	chr11	126062657	126062694	(9023928)	+	(GCG)n	Simple_repeat	1	38	(0)	765434
12	12.0	0.0	6.5	chr11	126062757	126062787	(9023835)	+	G-rich	Low_complexity	1	31	(0)	765435
17	13.0	7.1	0.0	chr11	128522439	128522480	(6564142)	+	G-rich	Low_complexity	1	45	(0)	769017
19	26.3	3.3	0.8	chr11	129278901	129278995	(5807627)	+	G-rich	Low_complexity	1	97	(0)	770083
12	18.2	4.3	4.1	chr11	129375708	129375754	(5710868)	+	(GGCGCG)n	Simple_repeat	1	49	(0)	770242
12	31.8	0.0	1.8	chr11	129375878	129375933	(5710689)	+	(CCCGCCA)n	Simple_repeat	1	56	(0)	770243
2731	6.5	0.8	0.3	chr11	129538957	129539309	(5547313)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	770461
11814	9.5	0.1	0.2	chr11	129539310	129540891	(5545731)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	770461
2241	9.5	8.4	0.3	chr11	129540892	129541217	(5545405)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	770461
21	21.2	1.8	1.7	chr11	130314431	130314494	(4772128)	+	(GGC)n	Simple_repeat	1	64	(0)	771693
23	15.4	2.5	4.9	chr11	130314765	130314825	(4771797)	+	G-rich	Low_complexity	1	59	(0)	771694
19	14.1	0.0	4.7	chr11	130314827	130314869	(4771753)	+	(GCC)n	Simple_repeat	1	43	(0)	771695
16	8.9	0.0	9.3	chr11	130314958	130315000	(4771622)	+	G-rich	Low_complexity	1	43	(0)	771696
11	20.1	2.9	0.0	chr11	134223757	134223790	(862832)	+	(CGCCCC)n	Simple_repeat	1	35	(0)	776964
19	10.2	7.1	0.0	chr11	134411954	134412001	(674621)	+	(GCCCG)n	Simple_repeat	1	51	(0)	777185
47	19.8	3.6	4.2	chr11	134412017	134412172	(674450)	+	G-rich	Low_complexity	1	155	(0)	777186
1417	15.4	4.5	3.8	chr11	134444196	134444458	(642164)	C	THE1B	LTR/ERVL-MaLR	(0)	364	100	777233
459	13.7	1.8	2.4	chr11	134444430	134444594	(642028)	C	THE1B	LTR/ERVL-MaLR	(182)	193	90	777233
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
1942	13.4	0.7	0.0	chr12	948707	948998	(132326311)	C	AluSx1	SINE/Alu	(18)	294	1	779752
529	16.8	0.0	5.6	chr12	949051	949157	(132326152)	C	AluJb	SINE/Alu	(7)	305	205	779753
1913	15.6	6.6	0.3	chr12	1080124	1080477	(132194832)	C	L1MB3	LINE/L1	(1)	6182	5805	780057
2350	8.0	0.3	16.6	chr12	1080491	1080912	(132194397)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	780058
323	20.0	0.0	0.0	chr12	1671345	1671409	(131603900)	C	L1MEd	LINE/L1	(5354)	1732	1668	781053
28	26.6	2.8	2.7	chr12	1690996	1691104	(131584205)	+	(CGG)n	Simple_repeat	1	112	(0)	781100
17	15.7	0.0	2.6	chr12	1691119	1691157	(131584152)	+	(CCCCCTC)n	Simple_repeat	1	39	(0)	781101
381	23.1	4.2	0.0	chr12	1796021	1796111	(131479198)	C	MER94	DNA/hAT-Blackjack	(22)	112	18	781286
434	27.9	6.9	1.2	chr12	1796360	1796548	(131478761)	C	MIRb	SINE/MIR	(60)	202	4	781282
14	12.7	0.0	7.5	chr12	2052290	2052329	(131222980)	+	(CTCCC)n	Simple_repeat	1	40	(0)	781623
26	0.0	4.0	7.7	chr12	2052894	2052943	(131222366)	+	(CGGG)n	Simple_repeat	1	52	(0)	781624
19	5.6	2.3	6.8	chr12	2053028	2053070	(131222239)	+	(GCGGC)n	Simple_repeat	1	44	(0)	781625
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
327	34.1	1.5	0.8	chr12	2256139	2256271	(131019038)	+	MER5A	DNA/hAT-Charlie	51	184	(5)	781931
380	29.2	10.2	5.2	chr12	3364850	3365062	(129910247)	C	MIRc	SINE/MIR	(30)	238	14	783737
757	25.2	15.4	4.2	chr12	3731133	3731517	(129543792)	+	LTR105_Mam	LTR/ERVL	39	474	(126)	784319
214	25.6	6.8	6.8	chr12	3958431	3958492	(129316817)	+	L2c	LINE/L2	3300	3364	(23)	784678
2714	7.2	2.0	0.0	chr12	3958493	3958840	(129316469)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	784679
15	14.5	5.3	0.0	chr12	4269199	4269236	(129006073)	+	G-rich	Low_complexity	1	40	(0)	785265
19	13.8	6.0	1.9	chr12	4269331	4269380	(129005929)	+	(CCG)n	Simple_repeat	1	53	(0)	785266
354	28.3	7.6	2.5	chr12	4900352	4900514	(128374795)	C	MLT1L	LTR/ERVL-MaLR	(34)	576	405	786255
619	35.2	4.2	4.2	chr12	4900834	4901307	(128374002)	+	L2c	LINE/L2	2910	3383	(4)	786253
1749	16.5	0.3	1.4	chr12	6279036	6279332	(126995977)	C	AluJb	SINE/Alu	(15)	297	4	788383
13	28.0	0.0	3.6	chr12	6914395	6914449	(126360860)	+	(CCCCCTC)n	Simple_repeat	1	55	(0)	789639
32	23.2	1.0	3.1	chr12	6914534	6914629	(126360680)	+	(CGC)n	Simple_repeat	1	97	(0)	789640
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
19	7.2	0.0	0.0	chr12	6938123	6938152	(126337157)	+	(CTGCG)n	Simple_repeat	1	30	(0)	789669
14	22.2	2.3	2.2	chr12	7440325	7440368	(125834941)	+	(GCC)n	Simple_repeat	1	45	(0)	790385
307	4.8	5.2	0.0	chr12	7440440	7440488	(125834821)	C	L1PA8A	LINE/L1	(301)	5830	5776	790386
23020	11.9	2.9	0.6	chr12	7521894	7528202	(125747107)	C	L1PA10	LINE/L1	(8)	6475	73	790473
2708	8.3	0.6	0.0	chr12	7528219	7528569	(125746740)	+	THE1A	LTR/ERVL-MaLR	3	355	(0)	790474
2466	11.8	1.8	0.0	chr12	7528570	7528950	(125746359)	+	THE1A-int	LTR/ERVL-MaLR	1	388	(1192)	790474
3676	11.9	13.3	0.5	chr12	8899139	8899754	(124375555)	C	MER39	LTR/ERV1	(0)	707	1	793108
1127	25.9	8.4	7.4	chr12	8899755	8899876	(124375433)	+	L2a	LINE/L2	2876	2972	(447)	793107
2601	9.3	0.3	0.8	chr12	8899877	8900233	(124375076)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	793109
424	23.7	18.7	0.5	chr12	9064134	9064279	(124211030)	+	MIR	SINE/MIR	3	174	(94)	793383
1537	20.4	7.8	0.9	chr12	9064280	9064729	(124210580)	+	MER52D	LTR/ERV1	5	488	(1635)	793384
18	0.0	0.0	0.0	chr12	10723070	10723092	(122552217)	+	(GGT)n	Simple_repeat	1	23	(0)	795576
12	21.0	5.0	4.8	chr12	10723235	10723294	(122552015)	+	(GCGGCT)n	Simple_repeat	1	63	(0)	795577
10267	10.6	3.5	3.6	chr12	10791023	10792595	(122482714)	C	THE1C-int	LTR/ERVL-MaLR	(7)	1573	2	795673
1890	15.8	3.1	2.6	chr12	10792597	10792947	(122482362)	C	THE1C	LTR/ERVL-MaLR	(0)	364	12	795673
16	20.1	0.0	4.1	chr12	12562056	12562104	(120713205)	+	(GCGCCCC)n	Simple_repeat	1	49	(0)	798341
14	14.1	7.7	0.0	chr12	12562240	12562278	(120713031)	+	(CGCTCC)n	Simple_repeat	1	42	(0)	798342
13	20.0	0.0	2.8	chr12	12611924	12611959	(120663350)	+	GA-rich	Low_complexity	1	36	(0)	798443
15	24.0	3.2	3.1	chr12	12612098	12612159	(120663150)	+	G-rich	Low_complexity	1	64	(0)	798444
2293	12.5	1.1	0.8	chr12	12818649	12819002	(120456307)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	798840
1050	24.7	4.0	9.2	chr12	13048138	13048637	(120226672)	C	L1M7	LINE/L1	(4661)	1557	1085	799308
492	25.1	5.6	9.2	chr12	13048658	13048724	(120226585)	+	MIR	SINE/MIR	24	99	(163)	799309
2206	13.2	3.6	2.8	chr12	13048725	13049084	(120226225)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	799310
492	25.1	5.6	9.2	chr12	13049085	13049188	(120226121)	+	MIR	SINE/MIR	100	189	(73)	799309
2124	13.1	0.0	0.0	chr12	13049189	13049479	(120225830)	C	AluSx1	SINE/Alu	(21)	291	1	799311
2350	20.4	7.8	1.2	chr12	13231723	13231922	(120043387)	+	MLT1F	LTR/ERVL-MaLR	1	227	(321)	799565
2725	9.0	0.0	0.0	chr12	13231923	13232277	(120043032)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	799566
2350	20.4	7.8	1.2	chr12	13232278	13232587	(120042722)	+	MLT1F	LTR/ERVL-MaLR	228	548	(0)	799565
43062	7.6	1.9	1.6	chr12	14294295	14298192	(118977117)	C	HERVL-int	LTR/ERVL	(711)	4943	1006	801121
2169	13.8	3.6	2.8	chr12	15724565	15724923	(117550386)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	803198
2585	6.6	0.0	0.0	chr12	16538606	16538907	(116736402)	C	AluY	SINE/Alu	(9)	302	1	804413
2130	13.4	0.8	3.6	chr12	16538908	16539143	(116736166)	C	THE1A	LTR/ERVL-MaLR	(119)	236	1	804412
1385	29.6	3.1	2.9	chr12	16969420	16969834	(116305475)	+	HERVL40-int	LTR/ERVL	3842	4258	(1272)	804934
1718	14.0	4.5	2.1	chr12	16969863	16970190	(116305119)	+	THE1D	LTR/ERVL-MaLR	21	356	(25)	804936
245	14.6	0.0	0.0	chr12	16970191	16970231	(116305078)	C	L1M2	LINE/L1	(2639)	4923	4883	804937
5861	20.5	3.4	2.2	chr12	16970321	16973154	(116302155)	C	L1M2	LINE/L1	(2711)	4851	1971	804937
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
2581	31.2	7.2	6.3	chr12	18928837	18929921	(114345388)	+	ERVL-E-int	LTR/ERVL	1627	2823	(2844)	807267
2421	10.8	1.1	0.8	chr12	18929922	18930275	(114345034)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	807268
2581	32.9	6.6	3.5	chr12	18930276	18930898	(114344411)	+	ERVL-E-int	LTR/ERVL	2824	3465	(2202)	807267
15	22.4	6.4	0.0	chr12	19129671	19129717	(114145592)	+	(GC)n	Simple_repeat	1	50	(0)	807583
19	14.3	4.2	2.0	chr12	19129701	19129748	(114145561)	+	(GCTC)n	Simple_repeat	1	50	(0)	807584
18	17.2	0.0	2.4	chr12	19129747	19129787	(114145522)	+	(CGG)n	Simple_repeat	1	41	(0)	807585
12	24.0	4.5	0.0	chr12	19129909	19129952	(114145357)	+	G-rich	Low_complexity	1	46	(0)	807586
15	25.3	0.0	2.0	chr12	19130182	19130230	(114145079)	+	G-rich	Low_complexity	1	49	(0)	807587
31	16.6	1.4	1.4	chr12	19439369	19439437	(113835872)	+	G-rich	Low_complexity	1	70	(0)	808198
25	22.0	1.4	2.7	chr12	19439621	19439692	(113835617)	+	GA-rich	Low_complexity	1	73	(0)	808199
1883	13.7	6.3	2.5	chr12	19489148	19489513	(113785796)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	808290
2758	8.2	0.0	0.0	chr12	19625728	19626082	(113649227)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	808536
4907	13.8	1.2	1.5	chr12	19626083	19626841	(113648468)	C	L1PA17	LINE/L1	(200)	5966	5208	808535
2243	11.7	1.4	0.6	chr12	20229871	20230222	(113045087)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	809385
22	7.4	0.0	0.0	chr12	20369183	20369211	(112906098)	+	(GT)n	Simple_repeat	1	29	(0)	809556
20	22.9	0.0	0.0	chr12	20369212	20369228	(112906081)	+	(GCGT)n	Simple_repeat	3	48	(0)	809557
14	16.1	0.0	0.0	chr12	20369562	20369589	(112905720)	+	GA-rich	Low_complexity	1	28	(0)	809558
2396	13.2	0.0	1.6	chr12	23133533	23133902	(110141407)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	813209
2345	10.6	1.4	1.1	chr12	23326103	23326456	(109948853)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	813443
1762	15.4	6.7	2.5	chr12	24329194	24329552	(108945757)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	814755
37	15.3	0.0	0.0	chr12	25250861	25250926	(108024383)	+	(GCC)n	Simple_repeat	1	66	(0)	816204
2641	9.3	0.3	0.0	chr12	25292958	25293311	(107981998)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	816276
11	24.9	3.2	4.7	chr12	26122126	26122187	(107153122)	+	(CGGCGTG)n	Simple_repeat	1	64	(0)	817536
29	3.2	0.0	0.0	chr12	26122283	26122314	(107152995)	+	(GCG)n	Simple_repeat	1	32	(0)	817537
28	4.2	8.2	0.0	chr12	26122613	26122661	(107152648)	+	(GCC)n	Simple_repeat	1	53	(0)	817538
24	20.1	2.8	2.7	chr12	27970313	27970384	(105304925)	+	G-rich	Low_complexity	1	74	(0)	820421
13	16.4	0.0	7.5	chr12	29783878	29783917	(103491392)	+	(CCG)n	Simple_repeat	1	40	(0)	822853
1866	13.8	7.5	1.1	chr12	30480188	30480538	(102794771)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	823748
14	18.5	2.6	2.5	chr12	30754859	30754897	(102520412)	+	(CTC)n	Simple_repeat	1	40	(0)	824129
300	35.0	6.2	6.9	chr12	30755000	30755260	(102520049)	+	L1M4b	LINE/L1	291	549	(6318)	824130
2710	8.8	0.8	0.0	chr12	30947410	30947761	(102327548)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	824443
12370	8.0	1.7	0.0	chr12	30947762	30949314	(102325995)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	824443
407	35.0	10.6	8.4	chr12	31117578	31118801	(102156508)	C	L1MDa	LINE/L1	(5629)	1004	402	824695
13	22.4	0.0	4.4	chr12	31324752	31324796	(101950513)	+	(CCGGACC)n	Simple_repeat	1	45	(0)	825004
14	0.0	0.0	0.0	chr12	31590854	31590871	(101684438)	+	(GCC)n	Simple_repeat	1	18	(0)	825570
13	13.3	2.7	5.3	chr12	31590956	31590992	(101684317)	+	(GCC)n	Simple_repeat	1	38	(0)	825571
13	25.4	0.0	2.3	chr12	32106755	32106798	(101168511)	+	(CCCCCCG)n	Simple_repeat	1	44	(0)	826842
13	20.6	4.9	4.7	chr12	32106869	32106959	(101168350)	+	(GCGAGCC)n	Simple_repeat	1	91	(0)	826843
1951	10.8	7.9	4.4	chr12	32787957	32788323	(100486986)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	828134
2369	10.3	2.0	1.1	chr12	32916268	32916619	(100358690)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	828347
2984	13.1	3.2	3.7	chr12	32916620	32916885	(100358424)	+	L1MB5	LINE/L1	5899	6173	(1)	828344
19	11.3	2.6	0.0	chr12	39442876	39442913	(93832396)	+	(CCGCCGC)n	Simple_repeat	1	39	(0)	832451
19	27.2	1.2	3.7	chr12	39443387	39443466	(93831843)	+	(CCCCG)n	Simple_repeat	1	81	(0)	832452
25029	5.7	0.6	0.0	chr12	39664079	39670184	(93605125)	C	L1PA4	LINE/L1	(0)	6155	14	832763
1674	14.5	7.6	1.4	chr12	42118574	42118930	(91156379)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	836018
16	14.8	0.0	4.9	chr12	42144371	42144411	(91130898)	+	(CCCGCGC)n	Simple_repeat	1	41	(0)	836070
18	19.6	1.7	5.1	chr12	42144639	42144696	(91130613)	+	(CGC)n	Simple_repeat	1	59	(0)	836071
13	5.2	0.0	0.0	chr12	42144751	42144770	(91130539)	+	(CCG)n	Simple_repeat	1	20	(0)	836072
561	27.6	6.0	0.3	chr12	42145087	42145286	(91130023)	+	MIRb	SINE/MIR	6	221	(47)	836073
19	23.2	0.0	3.4	chr12	42237770	42237868	(91037441)	+	(CCCCGC)n	Simple_repeat	1	95	(0)	836251
18	31.3	0.0	2.7	chr12	42237908	42237981	(91037328)	+	(CGC)n	Simple_repeat	1	74	(0)	836252
36	6.7	0.0	0.0	chr12	42589509	42589555	(90685754)	+	(GCTGCGGG)n	Simple_repeat	1	47	(0)	836901
2386	11.1	0.8	0.8	chr12	42953656	42954010	(90321299)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	837421
1221	28.9	2.0	2.5	chr12	42954193	42954703	(90320606)	C	HAL1	LINE/L1	(318)	2189	1682	837422
12	16.5	0.0	0.0	chr12	43835773	43835799	(89439510)	+	(CGGCC)n	Simple_repeat	1	27	(0)	838633
14	18.5	4.8	6.2	chr12	43835973	43836034	(89439275)	+	(GCG)n	Simple_repeat	1	65	(0)	838634
2424	7.3	6.5	0.6	chr12	44091019	44091350	(89183959)	C	THE1A	LTR/ERVL-MaLR	(2)	353	1	839012
2177	12.1	4.4	3.1	chr12	44120909	44121265	(89154044)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	839035
2262	11.2	1.7	0.8	chr12	45069715	45070066	(88205243)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	840262
10528	11.9	2.9	1.3	chr12	45070067	45070317	(88204992)	C	THE1C-int	LTR/ERVL-MaLR	(1326)	254	2	840261
15	29.2	2.9	1.4	chr12	45729041	45729108	(87546201)	+	(GGCA)n	Simple_repeat	1	70	(0)	841278
17	17.1	5.4	3.4	chr12	45729238	45729306	(87546003)	+	(CCG)n	Simple_repeat	1	70	(0)	841279
32	9.0	3.5	8.0	chr12	45729578	45729664	(87545645)	+	(TCC)n	Simple_repeat	1	83	(0)	841280
44	2.3	0.0	0.0	chr12	45729666	45729709	(87545600)	+	(CGC)n	Simple_repeat	1	44	(0)	841281
15	27.1	3.1	1.5	chr12	45729941	45730004	(87545305)	+	G-rich	Low_complexity	1	66	(0)	841282
17	13.2	5.5	5.2	chr12	45990597	45990651	(87284658)	+	(CCTC)n	Simple_repeat	1	58	(0)	841694
204	38.8	7.5	0.0	chr12	48118863	48118960	(85156349)	+	L2b	LINE/L2	3264	3369	(6)	844726
20	22.6	0.0	0.0	chr12	48119197	48119243	(85156066)	+	GA-rich	Low_complexity	1	47	(0)	844727
17	0.0	0.0	0.0	chr12	48156987	48157005	(85118304)	+	(A)n	Simple_repeat	1	19	(0)	844775
12	17.0	0.0	7.5	chr12	48157006	48157025	(85118284)	+	A-rich	Low_complexity	2	40	(0)	844776
34	13.5	3.9	2.5	chr12	48350979	48351055	(84924254)	+	GA-rich	Low_complexity	1	80	(0)	845097
665	14.7	32.0	0.9	chr12	48351465	48351683	(84923626)	+	MER33	DNA/hAT-Charlie	5	323	(1)	845098
2120	8.9	6.1	0.0	chr12	48879642	48879933	(84395376)	C	AluSq	SINE/Alu	(0)	313	3	845976
200	27.5	8.1	5.2	chr12	48880176	48880193	(84395116)	C	MIRb	SINE/MIR	(40)	228	215	845977
1712	19.3	21.5	2.4	chr12	48880194	48880693	(84394616)	+	LTR29	LTR/ERV1	1	622	(0)	845978
13	14.6	0.0	5.9	chr12	48956305	48956338	(84318971)	+	(ACC)n	Simple_repeat	1	34	(0)	846156
664	25.0	16.0	1.9	chr12	48974623	48974989	(84300320)	C	L2a	LINE/L2	(177)	3249	2792	846192
14	24.8	3.0	4.3	chr12	49234624	49234690	(84040619)	+	(GCCGCC)n	Simple_repeat	1	69	(0)	846738
2258	11.8	0.0	0.0	chr12	50341555	50341850	(82933459)	+	AluSg	SINE/Alu	1	296	(14)	848979
334	28.0	9.1	2.7	chr12	50341869	50342125	(82933184)	+	L1M5	LINE/L1	3498	3772	(2374)	848980
1184	11.7	0.0	6.1	chr12	50342141	50342336	(82932973)	+	AluSz6	SINE/Alu	129	312	(0)	848981
705	27.7	9.7	1.6	chr12	52252631	52252876	(81022433)	+	MER102c	DNA/hAT-Charlie	64	331	(0)	852699
419	25.6	2.4	0.0	chr12	52252889	52253009	(81022300)	C	MIRb	SINE/MIR	(141)	127	4	852700
2671	8.7	0.0	1.1	chr12	52600430	52600788	(80674521)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	853157
1820	15.8	3.9	3.6	chr12	52815295	52815655	(80459654)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	853446
345	26.1	5.6	11.8	chr12	52815656	52815705	(80459604)	+	MIRb	SINE/MIR	127	175	(93)	853445
987	16.8	7.6	8.3	chr12	53131213	53131242	(80144067)	C	L1MB8	LINE/L1	(237)	5941	5912	854106
28	25.1	0.0	1.3	chr12	53938973	53939049	(79336260)	+	(GCG)n	Simple_repeat	1	77	(0)	855693
16	7.7	11.3	5.8	chr12	53976483	53976544	(79298765)	+	(GGCA)n	Simple_repeat	1	69	(0)	855725
17	16.0	0.0	7.0	chr12	54082554	54082566	(79192743)	+	G-rich	Low_complexity	1	12	(0)	855838
48	0.0	0.0	2.1	chr12	54082567	54082614	(79192695)	+	(CCGGGG)n	Simple_repeat	1	48	(0)	855839
17	6.1	5.6	2.6	chr12	54082618	54082653	(79192656)	+	(GGGGA)n	Simple_repeat	1	38	(0)	855840
25	24.2	1.2	3.6	chr12	54549560	54549642	(78725667)	+	(CGG)n	Simple_repeat	1	84	(0)	856639
2239	12.9	1.4	0.3	chr12	55517285	55517635	(77757674)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	857840
1892	9.9	0.0	2.4	chr12	55517636	55517924	(77757385)	+	THE1A-int	LTR/ERVL-MaLR	1	282	(1298)	857840
13	23.1	0.0	0.0	chr12	56152593	56152628	(77122681)	+	(CCCCGC)n	Simple_repeat	1	36	(0)	858986
24	23.2	4.9	1.2	chr12	56258303	56258384	(77016925)	+	(CGG)n	Simple_repeat	1	86	(0)	859169
721	19.2	15.8	1.8	chr12	57084754	57084981	(76190328)	+	MER5C	DNA/hAT-Charlie	48	313	(0)	860675
28	0.0	0.0	3.2	chr12	57085171	57085201	(76190108)	+	(TTTTTG)n	Simple_repeat	1	31	(0)	860676
630	19.7	3.6	0.0	chr12	57085211	57085342	(76189967)	C	FRAM	SINE/Alu	(39)	137	1	860677
353	30.9	1.5	4.7	chr12	57085403	57085565	(76189744)	+	L2c	LINE/L2	3144	3328	(59)	860674
1947	17.0	4.0	1.9	chr12	57411795	57412160	(75863149)	+	THE1C	LTR/ERVL-MaLR	2	375	(0)	861252
38	17.2	0.0	0.0	chr12	57522713	57522784	(75752525)	+	(GGC)n	Simple_repeat	1	72	(0)	861463
22	31.3	1.7	3.4	chr12	57523024	57523140	(75752169)	+	(CCCCGC)n	Simple_repeat	1	119	(0)	861464
11	34.6	2.9	0.0	chr12	57547085	57547153	(75728156)	+	G-rich	Low_complexity	1	71	(0)	861491
19	6.1	2.6	5.1	chr12	57632695	57632732	(75642577)	+	(CCT)n	Simple_repeat	1	39	(0)	861597
13	12.5	0.0	0.0	chr12	57633134	57633159	(75642150)	+	(CGCAG)n	Simple_repeat	1	26	(0)	861598
12	18.4	3.0	8.8	chr12	57737913	57737978	(75537331)	+	(GGCCGG)n	Simple_repeat	1	68	(0)	861767
19	20.2	0.0	2.1	chr12	57738120	57738166	(75537143)	+	(CGG)n	Simple_repeat	1	47	(0)	861768
22	23.1	3.5	3.4	chr12	57738320	57738405	(75536904)	+	(GCCGCC)n	Simple_repeat	1	89	(0)	861769
296	35.5	2.3	5.0	chr12	58620093	58620273	(74655036)	+	L1M5	LINE/L1	4021	4196	(1950)	863033
1397	13.0	0.9	0.9	chr12	58620301	58620510	(74654799)	+	THE1A	LTR/ERVL-MaLR	145	354	(1)	863034
1885	13.4	4.8	3.6	chr12	58620513	58620844	(74654465)	+	MSTB1	LTR/ERVL-MaLR	97	432	(0)	863035
2754	8.7	0.0	0.0	chr12	58653032	58653386	(74621923)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	863081
2506	12.7	0.8	0.0	chr12	59666448	59666808	(73608501)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	864395
2752	18.7	7.5	8.7	chr12	59666809	59666911	(73608398)	+	THE1B-int	LTR/ERVL-MaLR	1	103	(1477)	864395
2535	9.9	0.6	0.0	chr12	59666912	59667264	(73608045)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	864396
9437	13.2	3.9	4.8	chr12	59667265	59668755	(73606554)	+	THE1B-int	LTR/ERVL-MaLR	104	1580	(0)	864395
1491	16.1	11.8	2.0	chr12	60289431	60289773	(72985536)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	865154
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
241	29.4	3.5	7.6	chr12	62650439	62650556	(70624753)	+	Tigger15a	DNA/TcMar-Tigger	63	175	(540)	868264
1878	14.0	5.4	2.5	chr12	62650559	62650918	(70624391)	C	THE1D	LTR/ERVL-MaLR	(10)	371	1	868265
3046	6.5	0.3	0.0	chr12	62884919	62885272	(70390037)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	868641
253	28.5	4.6	3.1	chr12	63779456	63779568	(69495741)	C	L2a	LINE/L2	(17)	3409	3247	869919
12	16.1	5.7	0.0	chr12	63844435	63844469	(69430840)	+	(GCGCCC)n	Simple_repeat	1	37	(0)	870032
2004	11.0	2.0	3.3	chr12	64392065	64392363	(68882946)	C	AluSz	SINE/Alu	(9)	303	9	871049
31	3.1	0.0	0.0	chr12	64404467	64404499	(68870810)	+	(GCG)n	Simple_repeat	1	33	(0)	871076
23	18.1	0.0	0.0	chr12	64404541	64404586	(68870723)	+	(CCTG)n	Simple_repeat	1	46	(0)	871077
13	21.4	4.7	0.0	chr12	64404711	64404753	(68870556)	+	(CCGCT)n	Simple_repeat	1	45	(0)	871078
17	12.0	2.6	2.6	chr12	64824593	64824630	(68450679)	+	(CGCT)n	Simple_repeat	1	39	(0)	871866
2819	6.3	0.3	0.0	chr12	65920470	65920819	(67354490)	+	THE1A	LTR/ERVL-MaLR	1	351	(4)	873543
11808	9.2	0.1	0.9	chr12	65920828	65921253	(67354056)	+	THE1A-int	LTR/ERVL-MaLR	1	425	(1155)	873543
11808	9.2	0.1	0.9	chr12	65921546	65922709	(67352600)	+	THE1A-int	LTR/ERVL-MaLR	426	1578	(2)	873543
2646	8.0	1.4	0.0	chr12	65922712	65923061	(67352248)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	873543
590	28.6	10.1	3.6	chr12	66699252	66699320	(66575989)	C	LTR79	LTR/ERVL	(0)	527	464	874753
2173	13.5	4.7	1.7	chr12	66699321	66699673	(66575636)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	874754
590	28.6	10.1	3.6	chr12	66699674	66699937	(66575372)	C	LTR79	LTR/ERVL	(64)	463	170	874753
21	32.9	0.8	4.1	chr12	67269580	67269701	(66005608)	+	(GCGGCG)n	Simple_repeat	1	123	(0)	875650
5632	13.3	1.7	2.0	chr12	67487884	67488758	(65786551)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	420	875988
28	0.0	0.0	0.0	chr12	67488759	67488785	(65786524)	+	(T)n	Simple_repeat	1	27	(0)	875989
1963	13.3	1.8	1.8	chr12	67488788	67489065	(65786244)	C	AluSz6	SINE/Alu	(34)	278	1	875990
18	32.7	1.5	0.0	chr12	67648690	67648757	(65626552)	+	(GC)n	Simple_repeat	1	69	(0)	876222
12	11.5	3.3	3.2	chr12	67648900	67648929	(65626380)	+	GA-rich	Low_complexity	1	31	(0)	876223
2747	7.2	1.7	0.0	chr12	68029446	68029794	(65245515)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	876773
2280	13.1	1.6	3.0	chr12	68506432	68506800	(64768509)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	877507
19	19.8	0.0	6.7	chr12	69239578	69239637	(64035672)	+	(GCG)n	Simple_repeat	1	60	(0)	878960
16	13.3	3.0	0.0	chr12	69240134	69240166	(64035143)	+	(CCG)n	Simple_repeat	1	34	(0)	878961
841	21.1	9.8	1.8	chr12	69283885	69284212	(63991097)	+	L1ME3E	LINE/L1	4973	5329	(817)	879014
16	9.3	0.0	0.0	chr12	69284454	69284476	(63990833)	+	(T)n	Simple_repeat	1	23	(0)	879015
19	6.1	5.7	0.0	chr12	69738825	69738859	(63536450)	+	(GCTCCCG)n	Simple_repeat	1	37	(0)	879832
18	18.5	8.2	0.0	chr12	69738860	69738884	(63536425)	+	(CGCTCCCG)n	Simple_repeat	2	66	(0)	879833
2085	10.8	7.3	2.2	chr12	71854958	71855318	(61419991)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	882994
9737	13.4	3.5	0.9	chr12	73800600	73802134	(59473175)	+	THE1C-int	LTR/ERVL-MaLR	5	1580	(0)	885424
2199	11.9	0.8	2.2	chr12	74043971	74044330	(59230979)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	885753
2190	9.9	5.9	2.0	chr12	74654866	74655206	(58620103)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	886484
5641	17.2	1.8	2.9	chr12	74655207	74655547	(58619762)	C	L1M3	LINE/L1	(1572)	4568	4222	886483
98	0.0	3.9	0.9	chr12	75084231	75084334	(58190975)	+	(ATAG)n	Simple_repeat	1	108	(0)	887049
2643	8.0	0.3	2.2	chr12	75084352	75084710	(58190599)	+	THE1A	LTR/ERVL-MaLR	4	355	(0)	887050
5771	22.0	5.5	1.7	chr12	76590758	76592115	(56683194)	+	MLT1E1A-int	LTR/ERVL-MaLR	1	1421	(68)	889495
2192	9.3	3.4	4.5	chr12	76592116	76592474	(56682835)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	889496
5771	22.0	5.5	1.7	chr12	76592475	76592517	(56682792)	+	MLT1E1A-int	LTR/ERVL-MaLR	1422	1459	(30)	889495
1327	25.6	5.7	4.1	chr12	76592531	76593094	(56682215)	+	MLT1E1A	LTR/ERVL-MaLR	3	669	(11)	889495
11817	9.0	0.4	0.0	chr12	77215735	77217306	(56058003)	+	THE1A-int	LTR/ERVL-MaLR	1	1578	(2)	890541
2454	10.3	1.1	0.0	chr12	77217309	77217659	(56057650)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	890541
12	19.5	7.1	3.3	chr12	77324876	77324931	(55950378)	+	(CGCGCT)n	Simple_repeat	1	60	(0)	890694
16	12.1	11.1	0.0	chr12	77324940	77324984	(55950325)	+	(GGC)n	Simple_repeat	1	50	(0)	890695
18	15.6	0.0	0.0	chr12	77325016	77325051	(55950258)	+	(CCGCTC)n	Simple_repeat	1	36	(0)	890696
17	12.3	0.0	5.1	chr12	79689686	79689724	(53585585)	+	(GCCCG)n	Simple_repeat	1	39	(0)	893881
30	10.0	0.0	5.1	chr12	79691010	79691068	(53584241)	+	GA-rich	Low_complexity	1	59	(0)	893882
2724	8.5	0.6	0.0	chr12	83501000	83501352	(49773957)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	899176
1165	17.4	5.9	3.5	chr12	85036937	85037252	(48238057)	+	MER33	DNA/hAT-Charlie	1	324	(0)	901108
28	21.1	0.0	0.0	chr12	85037483	85037537	(48237772)	+	(T)n	Simple_repeat	1	55	(0)	901109
14	24.1	3.1	4.5	chr12	85037537	85037600	(48237709)	+	(TGAG)n	Simple_repeat	1	66	(0)	901110
2168	11.1	0.3	0.9	chr12	86073627	86073944	(47201365)	+	THE1A-int	LTR/ERVL-MaLR	1265	1580	(0)	902473
2541	11.1	0.6	0.0	chr12	86073947	86074297	(47201012)	+	THE1A	LTR/ERVL-MaLR	3	355	(0)	902473
11196	10.0	0.9	1.4	chr12	88030456	88032042	(45243267)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	904978
2462	9.7	3.7	0.0	chr12	88032043	88032384	(45242925)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	904978
2672	9.0	0.3	0.0	chr12	88597724	88598077	(44677232)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	905721
15	24.7	0.0	2.2	chr12	89352704	89352748	(43922561)	+	GA-rich	Low_complexity	1	45	(0)	906881
15	21.8	0.0	0.0	chr12	89708841	89708877	(43566432)	+	(GGC)n	Simple_repeat	1	37	(0)	907474
27	23.0	1.4	1.4	chr12	89709271	89709343	(43565966)	+	(CGC)n	Simple_repeat	1	74	(0)	907475
18	12.0	0.0	0.0	chr12	89709389	89709415	(43565894)	+	(GC)n	Simple_repeat	1	27	(0)	907476
11	13.2	5.7	2.7	chr12	89709428	89709462	(43565847)	+	G-rich	Low_complexity	1	37	(0)	907477
21	16.8	6.5	1.5	chr12	92145536	92145597	(41129712)	+	(GGC)n	Simple_repeat	1	66	(0)	911015
14	20.4	3.7	3.6	chr12	92146392	92146445	(41128864)	+	(GTGCG)n	Simple_repeat	1	56	(0)	911016
2795	11.8	0.3	0.3	chr12	93158075	93158438	(40116871)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	912841
13	24.7	1.8	3.5	chr12	93378425	93378480	(39896829)	+	G-rich	Low_complexity	1	57	(0)	913326
27	20.4	0.0	0.0	chr12	93378533	93378590	(39896719)	+	(CCCT)n	Simple_repeat	1	58	(0)	913327
193	32.7	13.3	2.4	chr12	94604828	94604912	(38670397)	C	L2b	LINE/L2	(162)	3213	3117	915492
12	16.8	10.6	0.0	chr12	94649867	94649913	(38625396)	+	(CCGCGCT)n	Simple_repeat	1	52	(0)	915565
19	24.0	0.0	5.6	chr12	94650284	94650355	(38624954)	+	(CCGC)n	Simple_repeat	1	67	(0)	915566
14	6.8	9.7	0.0	chr12	94650569	94650599	(38624710)	+	(CCG)n	Simple_repeat	1	34	(0)	915567
720	12.3	0.0	0.0	chr12	94913512	94913617	(38361692)	+	L1MA3	LINE/L1	6200	6305	(0)	916081
513	21.7	0.0	15.6	chr12	94913618	94913724	(38361585)	C	MLT1N2	LTR/ERVL-MaLR	(68)	494	403	916080
296	7.3	2.4	0.0	chr12	94913886	94913926	(38361383)	C	LTR67B	LTR/ERVL	(501)	119	78	916082
2732	8.5	0.3	0.0	chr12	96894214	96894567	(36380742)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	919849
2692	18.1	1.2	3.4	chr12	98344594	98344974	(34930335)	+	MLT2B1	LTR/ERVL	1	383	(137)	922030
2919	7.3	0.3	0.0	chr12	98344975	98345328	(34929981)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	922031
2692	18.1	1.2	3.4	chr12	98345329	98345397	(34929912)	+	MLT2B1	LTR/ERVL	384	449	(71)	922030
3993	10.9	2.6	0.5	chr12	98345398	98345950	(34929359)	+	MER61E	LTR/ERV1	1	565	(4)	922032
14	25.4	0.0	6.3	chr12	98516105	98516167	(34759142)	+	G-rich	Low_complexity	1	63	(0)	922401
2205	9.0	0.0	0.4	chr12	98569181	98569497	(34705812)	C	AluSc	SINE/Alu	(0)	309	2	922513
2403	10.5	3.6	3.3	chr12	98569498	98569703	(34705606)	+	THE1B	LTR/ERVL-MaLR	154	363	(1)	922512
834	29.0	12.2	1.8	chr12	98955041	98955437	(34319872)	C	L2a	LINE/L2	(46)	3380	2937	923176
1914	22.9	1.6	1.8	chr12	98955420	98955867	(34319442)	C	L2a	LINE/L2	(585)	2834	2388	923176
2742	12.7	1.9	1.7	chr12	100108635	100108988	(33166321)	+	L1MA3	LINE/L1	5731	6068	(237)	924882
1579	13.7	15.5	2.1	chr12	100108989	100109159	(33166150)	+	THE1D	LTR/ERVL-MaLR	1	188	(193)	924883
65	0.0	0.0	0.0	chr12	100109160	100109214	(33166095)	+	(CT)n	Simple_repeat	1	55	(0)	924884
1579	13.7	15.5	2.1	chr12	100109215	100109371	(33165938)	+	THE1D	LTR/ERVL-MaLR	189	380	(1)	924883
741	31.9	13.1	4.4	chr12	100268786	100269386	(33005923)	+	L2c	LINE/L2	2487	3159	(228)	925233
14	20.4	3.9	7.4	chr12	101697808	101697885	(31577424)	+	(CCAGGCG)n	Simple_repeat	1	81	(0)	927780
15	14.8	1.9	7.5	chr12	101877701	101877752	(31397557)	+	(GCGCCCG)n	Simple_repeat	1	53	(0)	928161
13	5.2	0.0	0.0	chr12	101877768	101877787	(31397522)	+	(CGG)n	Simple_repeat	1	20	(0)	928162
19	18.9	0.0	0.0	chr12	101878889	101878924	(31396385)	+	(T)n	Simple_repeat	1	36	(0)	928163
6298	13.2	5.9	4.4	chr12	102215385	102216595	(31058714)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	2	928723
2257	13.0	0.6	1.1	chr12	103185570	103185926	(30089383)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	930257
2091	11.7	7.6	0.8	chr12	103516411	103516765	(29758544)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	930779
8936	13.9	3.7	4.4	chr12	103836173	103837938	(29437371)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1651	1	931382
2696	9.6	0.6	0.0	chr12	103837939	103838291	(29437018)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	931382
408	27.8	1.6	0.5	chr12	103838329	103838484	(29436825)	C	MIR	SINE/MIR	(34)	234	73	931381
19	26.1	5.4	0.0	chr12	104064727	104064800	(29210509)	+	(GGC)n	Simple_repeat	1	78	(0)	931798
2542	11.6	0.5	1.4	chr12	104395961	104396327	(28878982)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	932474
364	28.7	18.6	1.5	chr12	105106686	105107109	(28168200)	C	L1ME3G	LINE/L1	(10)	914	429	933856
12	16.6	4.5	4.3	chr12	105107671	105107714	(28167595)	+	(GAGCCG)n	Simple_repeat	1	46	(0)	933857
1950	13.8	6.6	6.8	chr12	105535845	105536226	(27739083)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	934559
1381	26.0	8.8	1.3	chr12	105536227	105536729	(27738580)	C	L1ME3A	LINE/L1	(49)	6124	5581	934558
1540	15.3	6.6	16.5	chr12	105859357	105859763	(27415546)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	935160
23	10.7	2.5	0.0	chr12	106139178	106139217	(27136092)	+	(GCG)n	Simple_repeat	1	41	(0)	935685
11872	8.5	0.6	0.1	chr12	106787854	106789424	(26485885)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	2	936853
2010	12.6	7.9	0.3	chr12	106789428	106789753	(26485556)	C	THE1A	LTR/ERVL-MaLR	(2)	353	1	936853
13	23.2	0.0	0.0	chr12	106956029	106956064	(26319245)	+	(CCCGGC)n	Simple_repeat	1	36	(0)	937152
17	23.9	0.0	0.0	chr12	107319727	107319771	(25955538)	+	(GGCTCG)n	Simple_repeat	1	45	(0)	937866
23	21.5	5.0	4.8	chr12	107319821	107319930	(25955379)	+	(CGC)n	Simple_repeat	1	110	(0)	937867
16	11.5	0.0	3.2	chr12	107319923	107319953	(25955356)	+	(CCA)n	Simple_repeat	1	31	(0)	937868
2210	13.1	0.0	0.0	chr12	107683625	107683929	(25591380)	C	AluSg	SINE/Alu	(4)	306	2	938703
2158	11.6	3.0	9.7	chr12	107683930	107684145	(25591164)	+	THE1B	LTR/ERVL-MaLR	171	364	(0)	938702
1521	21.3	8.9	14.2	chr12	107684146	107684469	(25590840)	C	MLT1G	LTR/ERVL-MaLR	(329)	266	1	938701
16	17.1	0.0	0.0	chr12	109052622	109052654	(24222655)	+	(CGG)n	Simple_repeat	1	33	(0)	941640
12	5.6	0.0	0.0	chr12	109996273	109996291	(23279018)	+	(GGC)n	Simple_repeat	1	19	(0)	943774
13	24.4	0.0	4.3	chr12	110281353	110281399	(22993910)	+	(CGCCC)n	Simple_repeat	1	47	(0)	944414
310	22.4	19.9	0.8	chr12	110582565	110582690	(22692619)	+	MIRb	SINE/MIR	91	246	(22)	945046
14	24.3	5.6	2.7	chr12	110583338	110583408	(22691901)	+	(CAGCCC)n	Simple_repeat	1	75	(0)	945047
2351	10.6	0.0	0.3	chr12	111123181	111123483	(22151826)	C	AluSz6	SINE/Alu	(10)	302	1	946345
22723	13.7	3.5	2.2	chr12	111128085	111131055	(22144254)	C	ERVL-B4-int	LTR/ERVL	(1783)	3931	898	946353
2845	7.1	0.3	0.6	chr12	111131056	111131410	(22143899)	C	THE1A	LTR/ERVL-MaLR	(0)	355	2	946356
11948	9.6	0.8	0.6	chr12	111131412	111132557	(22142752)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	442	946356
1302	25.4	6.7	5.4	chr12	111370950	111371252	(21904057)	C	L2a	LINE/L2	(482)	2937	2632	946924
2795	8.5	0.3	0.0	chr12	111371261	111371614	(21903695)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	946927
11612	7.9	4.2	0.3	chr12	111371615	111372729	(21902580)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	447	946927
1714	3.9	0.5	0.0	chr12	111373755	111373959	(21901350)	C	L1PA5	LINE/L1	(2)	6152	5947	946930
648	6.3	0.0	0.0	chr12	111373960	111374038	(21901271)	C	AluSx3	SINE/Alu	(232)	79	1	946931
2277	8.0	0.3	0.0	chr12	111374039	111374340	(21900969)	C	THE1A	LTR/ERVL-MaLR	(52)	303	1	946927
862	22.3	3.0	1.0	chr12	111569905	111570103	(21705206)	+	MER3	DNA/hAT-Charlie	5	207	(2)	947363
184	29.8	11.5	4.7	chr12	111570113	111570281	(21705028)	C	L3	LINE/CR1	(113)	3986	3805	947364
458	23.4	8.2	1.4	chr12	111570282	111570428	(21704881)	+	L1MC5	LINE/L1	9135	9292	(12)	947365
17	16.6	6.4	0.0	chr12	111598828	111598874	(21676435)	+	(CGAGGA)n	Simple_repeat	1	50	(0)	947447
74	1.4	0.0	0.0	chr12	111598950	111599019	(21676290)	+	(GCT)n	Simple_repeat	1	70	(0)	947448
15	24.7	3.8	0.0	chr12	111599329	111599381	(21675928)	+	G-rich	Low_complexity	1	55	(0)	947449
14	13.2	2.9	2.8	chr12	111599379	111599413	(21675896)	+	(CCGCC)n	Simple_repeat	1	36	(0)	947450
13	28.3	1.6	3.1	chr12	111766730	111766792	(21508517)	+	G-rich	Low_complexity	1	64	(0)	947852
13	19.0	0.0	5.0	chr12	111766958	111766997	(21508312)	+	(GCCCGCT)n	Simple_repeat	1	40	(0)	947853
15	17.2	0.0	0.0	chr12	111842307	111842339	(21432970)	+	(GGCGGA)n	Simple_repeat	1	33	(0)	948010
18	23.0	1.5	4.5	chr12	111842515	111842580	(21432729)	+	(GCC)n	Simple_repeat	1	67	(0)	948011
12	9.7	0.0	0.0	chr12	112381753	112381774	(20893535)	+	(GGAG)n	Simple_repeat	1	22	(0)	949063
28	3.3	0.0	0.0	chr12	112382088	112382118	(20893191)	+	(GCC)n	Simple_repeat	1	31	(0)	949064
36	0.0	0.0	0.0	chr12	112382328	112382360	(20892949)	+	(GCC)n	Simple_repeat	1	33	(0)	949065
13	23.3	0.0	2.4	chr12	113221664	113221705	(20053604)	+	G-rich	Low_complexity	1	42	(0)	951099
37	20.0	1.2	0.0	chr12	114684052	114684132	(18591177)	+	GA-rich	Low_complexity	1	82	(0)	954267
13	15.7	8.1	4.5	chr12	114684550	114684611	(18590698)	+	(GAGGCAG)n	Simple_repeat	1	67	(0)	954268
703	20.3	0.0	0.8	chr12	114809098	114809220	(18466089)	C	FRAM	SINE/Alu	(54)	122	1	954600
12013	9.5	0.2	0.1	chr12	115366194	115367772	(17907537)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	955860
2728	9.3	0.3	0.0	chr12	115367774	115368126	(17907183)	+	THE1A	LTR/ERVL-MaLR	2	355	(0)	955860
6578	10.2	0.7	0.2	chr12	115678784	115679662	(17595647)	+	THE1A-int	LTR/ERVL-MaLR	698	1580	(0)	956534
2701	9.9	0.0	0.0	chr12	115679663	115680017	(17595292)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	956534
889	30.4	8.4	4.6	chr12	115680050	115680847	(17594462)	+	L1ME4a	LINE/L1	5269	6099	(25)	956535
20	19.6	1.5	6.0	chr12	116277602	116277668	(16997641)	+	(TCC)n	Simple_repeat	1	64	(0)	957622
21	24.9	1.4	2.8	chr12	116277749	116277818	(16997491)	+	(GGC)n	Simple_repeat	1	71	(0)	957623
17	10.8	0.0	0.0	chr12	116277869	116277898	(16997411)	+	(GAGG)n	Simple_repeat	1	30	(0)	957624
12	14.2	6.8	4.3	chr12	116880842	116880885	(16394424)	+	GA-rich	Low_complexity	1	47	(0)	959183
16	26.9	0.0	8.5	chr12	116880900	116880954	(16394355)	+	(CTCCCG)n	Simple_repeat	1	89	(0)	959184
13	10.0	5.9	2.8	chr12	116880955	116880988	(16394321)	+	(CTCG)n	Simple_repeat	1	36	(0)	959185
16	5.6	7.3	4.5	chr12	116881117	116881157	(16394152)	+	(GCGCCG)n	Simple_repeat	1	44	(0)	959186
495	23.9	12.4	4.7	chr12	116910536	116910750	(16364559)	+	L2a	LINE/L2	3192	3425	(1)	959264
14	14.6	0.0	3.1	chr12	116910931	116910962	(16364347)	+	(GCG)n	Simple_repeat	1	32	(0)	959265
15	16.6	0.0	2.8	chr12	116911069	116911104	(16364205)	+	(GGCGCA)n	Simple_repeat	1	36	(0)	959266
12	16.8	7.5	0.0	chr12	116911368	116911407	(16363902)	+	(CGCCCC)n	Simple_repeat	1	43	(0)	959267
1938	12.9	0.4	1.4	chr12	117446583	117446860	(15828449)	+	AluSz	SINE/Alu	1	275	(37)	960385
2638	8.3	1.4	0.3	chr12	117446861	117447208	(15828101)	+	THE1A	LTR/ERVL-MaLR	2	353	(2)	960386
705	27.9	1.0	1.9	chr12	117577426	117577503	(15697806)	C	MIR	SINE/MIR	(32)	230	155	960647
2003	17.1	3.3	3.0	chr12	117577504	117577866	(15697443)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	960648
705	27.9	1.0	1.9	chr12	117577867	117577992	(15697317)	C	MIR	SINE/MIR	(108)	154	29	960647
1851	14.2	9.2	1.7	chr12	117621021	117621372	(15653937)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	960741
675	25.6	6.3	0.5	chr12	117621374	117621581	(15653728)	+	MIR	SINE/MIR	2	222	(40)	960742
343	17.5	1.7	0.0	chr12	118135834	118135890	(15139419)	C	LSU-rRNA_Hsa	rRNA	(2344)	2691	2634	961947
12	17.6	0.0	5.6	chr12	119988991	119989026	(13286283)	+	(CGC)n	Simple_repeat	1	36	(0)	966004
310	29.2	4.5	10.5	chr12	120413699	120413784	(12861525)	C	L1ME4a	LINE/L1	(104)	6020	5940	966988
1784	6.9	0.0	0.9	chr12	120430133	120430350	(12844959)	C	AluSx	SINE/Alu	(96)	216	1	967055
1098	13.3	21.6	2.0	chr12	120430351	120430456	(12844853)	+	AluJb	SINE/Alu	144	310	(2)	967053
236	17.7	9.0	4.1	chr12	120430689	120430762	(12844547)	C	L2a	LINE/L2	(15)	3372	3277	967056
2239	7.5	1.7	0.7	chr12	120430807	120431100	(12844209)	C	AluSc8	SINE/Alu	(14)	297	1	967057
1951	13.5	0.3	2.5	chr12	120617588	120617905	(12657404)	C	AluJo	SINE/Alu	(0)	312	2	967518
1951	13.9	3.9	3.4	chr12	120617906	120618132	(12657177)	+	THE1D	LTR/ERVL-MaLR	154	381	(0)	967517
1702	14.1	0.0	1.1	chr12	120618133	120618394	(12656915)	C	AluJb	SINE/Alu	(53)	259	1	967519
19	26.8	1.5	1.5	chr12	120903964	120904028	(12371281)	+	(GCTG)n	Simple_repeat	1	66	(0)	968071
13	0.0	0.0	0.0	chr12	120904106	120904122	(12371187)	+	(GCG)n	Simple_repeat	1	17	(0)	968072
2415	10.3	4.1	3.6	chr12	121149322	121149683	(12125626)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	968692
13	26.2	1.7	3.4	chr12	121626548	121626605	(11648704)	+	G-rich	Low_complexity	1	59	(0)	969869
32	4.2	3.9	1.9	chr12	121803919	121803978	(11471331)	+	(GAG)n	Simple_repeat	1	61	(0)	970353
30	20.6	0.0	0.0	chr12	121804065	121804131	(11471178)	+	(GGCAGC)n	Simple_repeat	1	67	(0)	970354
12149	7.9	1.0	0.9	chr12	121972788	121973996	(11301313)	+	THE1B-int	LTR/ERVL-MaLR	362	1580	(0)	970803
2177	14.0	3.6	3.6	chr12	121973997	121974359	(11300950)	+	THE1B	LTR/ERVL-MaLR	1	363	(1)	970803
632	27.2	3.4	0.6	chr12	121974378	121974551	(11300758)	C	MIRb	SINE/MIR	(77)	191	13	970805
17	12.8	2.9	0.0	chr12	122022318	122022351	(11252958)	+	G-rich	Low_complexity	1	35	(0)	970923
3087	17.2	2.4	9.2	chr12	122195541	122195876	(11079433)	C	L1M4b	LINE/L1	(4695)	2172	1836	971294
1009	27.3	7.3	2.3	chr12	122195884	122196232	(11079077)	C	L1M4b	LINE/L1	(5716)	1386	1019	971294
18	13.5	0.0	0.0	chr12	123364774	123364806	(9910503)	+	(GCG)n	Simple_repeat	1	33	(0)	973884
12	20.0	0.0	0.0	chr12	123364841	123364869	(9910440)	+	(CGCCC)n	Simple_repeat	1	29	(0)	973885
15	24.3	1.8	3.5	chr12	123364930	123364986	(9910323)	+	(CTCC)n	Simple_repeat	1	58	(0)	973886
661	21.1	2.7	0.7	chr12	123602485	123602627	(9672682)	+	MIR	SINE/MIR	46	191	(71)	974523
11916	9.0	1.1	0.6	chr12	124164989	124165413	(9109896)	C	THE1A-int	LTR/ERVL-MaLR	(1157)	423	1	975592
2184	10.3	6.8	2.9	chr12	124165414	124165754	(9109555)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	975592
591	25.9	3.8	7.4	chr12	124165755	124165854	(9109455)	C	MIRb	SINE/MIR	(134)	134	48	975591
616	32.6	2.6	1.8	chr12	124165830	124166054	(9109255)	+	MIR	SINE/MIR	31	257	(5)	975594
659	0.0	0.0	0.0	chr12	124927345	124927416	(8347893)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	977165
679	1.4	0.0	0.0	chr12	124927842	124927915	(8347394)	C	tRNA-Phe-TTY	tRNA	(2)	74	1	977166
568	27.6	4.1	2.0	chr12	124928036	124928262	(8347047)	+	L2a	LINE/L2	3126	3424	(2)	977167
257	32.7	6.1	9.5	chr12	125064954	125065122	(8210187)	+	L2a	LINE/L2	3259	3421	(5)	977496
13	23.0	7.1	0.0	chr12	125065504	125065559	(8209750)	+	(GGTCCCT)n	Simple_repeat	1	60	(0)	977507
588	26.2	5.4	4.3	chr12	126353905	126354066	(6921243)	C	MER113	DNA/hAT-Charlie	(261)	260	99	979671
2563	10.5	1.1	0.8	chr12	126354067	126354420	(6920889)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	979672
588	26.2	5.4	4.3	chr12	126354421	126354512	(6920797)	C	MER113	DNA/hAT-Charlie	(423)	98	3	979671
2526	10.5	0.8	0.6	chr12	128582460	128582813	(4692496)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	983450
1029	15.2	0.0	4.1	chr12	128582814	128582938	(4692371)	C	FRAM	SINE/Alu	(52)	124	1	983449
20	20.6	1.9	1.9	chr12	128997842	128997869	(4277440)	+	(AT)n	Simple_repeat	1	28	(0)	984300
2161	11.7	5.0	1.9	chr12	128997870	128998236	(4277073)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	984301
20	20.6	1.9	1.9	chr12	128998237	128998260	(4277049)	+	(AT)n	Simple_repeat	1	24	(0)	984302
254	30.9	1.2	2.4	chr12	128998283	128998365	(4276944)	+	MLT1O	LTR/ERVL-MaLR	111	192	(350)	984303
2228	11.1	8.2	0.0	chr12	130741148	130741481	(2533828)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	987134
19	17.2	3.6	3.5	chr12	130839323	130839378	(2435931)	+	G-rich	Low_complexity	1	58	(0)	987296
7014	19.5	8.4	10.0	chr12	131188197	131189318	(2085991)	+	MER52A	LTR/ERV1	1	1167	(588)	987828
2821	8.2	0.0	0.0	chr12	131189319	131189673	(2085636)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	987829
10280	16.8	3.1	2.6	chr12	131701798	131703918	(1571391)	+	L1M2a	LINE/L1	684	2827	(4739)	988470
307	16.8	0.0	3.8	chr12	131928703	131928791	(1346518)	+	AluJb	SINE/Alu	104	188	(114)	988829
240	23.6	6.8	1.8	chr12	132036664	132036775	(1238534)	+	L1ME4a	LINE/L1	6004	6121	(3)	989009
13	21.5	2.2	2.2	chr12	132144495	132144539	(1130770)	+	G-rich	Low_complexity	1	46	(0)	989133
12	20.1	4.1	3.9	chr12	132144699	132144747	(1130562)	+	G-rich	Low_complexity	1	51	(0)	989134
29	22.5	1.9	6.5	chr12	132759512	132759617	(515692)	+	(TA)n	Simple_repeat	1	108	(0)	989904
188	28.6	13.4	3.1	chr12	132759751	132759851	(515458)	C	MIRc	SINE/MIR	(69)	193	74	989905
21	6.4	0.0	2.9	chr12	132887158	132887192	(388117)	+	(CCCGGC)n	Simple_repeat	1	35	(0)	990111
16	23.9	0.0	8.6	chr12	133037457	133037537	(237772)	+	G-rich	Low_complexity	1	81	(0)	990398
264	22.2	0.0	0.0	chr12	133037947	133037991	(237318)	C	Alu	SINE/Alu	(88)	45	1	990399
12	15.6	3.5	0.0	chr12	133130499	133130527	(144782)	+	(GTGT)n	Simple_repeat	1	30	(0)	990566
774	12.2	5.3	5.3	chr13	27122048	27122151	(87242177)	+	AluSg7	SINE/Alu	1	110	(199)	1004348
1668	15.9	9.6	0.9	chr13	27122152	27122475	(87241853)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1004349
774	12.2	5.3	5.3	chr13	27122476	27122501	(87241827)	+	AluSg7	SINE/Alu	111	131	(178)	1004348
927	21.1	0.0	0.0	chr13	27122506	27122652	(87241676)	+	AluJb	SINE/Alu	137	283	(29)	1004350
358	30.5	9.9	3.0	chr13	27123355	27123491	(87240837)	+	Tigger10	DNA/TcMar-Tigger	1185	1341	(503)	1004354
2480	12.2	0.6	0.3	chr13	27123492	27123854	(87240474)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1004355
19	0.0	0.0	0.0	chr13	27620497	27620520	(86743808)	+	(CGC)n	Simple_repeat	1	24	(0)	1005251
15	25.2	0.0	0.0	chr13	27968631	27968672	(86395656)	+	(GGT)n	Simple_repeat	1	42	(0)	1005829
22	21.7	4.6	0.0	chr13	27969177	27969189	(86395139)	+	(TCCC)n	Simple_repeat	1	67	(0)	1005830
18	15.5	7.8	0.0	chr13	27969190	27969240	(86395088)	+	(CCTTCCT)n	Simple_repeat	1	55	(0)	1005831
1826	17.6	4.8	6.0	chr13	28077149	28077244	(86287084)	C	MSTB1	LTR/ERVL-MaLR	(55)	377	289	1006063
2734	7.3	0.0	6.6	chr13	28077245	28077624	(86286704)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1006064
11939	8.8	0.4	0.6	chr13	28079012	28079514	(86284814)	C	THE1A-int	LTR/ERVL-MaLR	(1082)	498	1	1006064
2860	7.3	0.3	0.0	chr13	28079515	28079868	(86284460)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1006064
1826	17.6	4.8	6.0	chr13	28079869	28080093	(86284235)	C	MSTB1	LTR/ERVL-MaLR	(144)	288	54	1006063
23	25.9	4.6	0.0	chr13	29850315	29850403	(84513925)	+	(CGCCTC)n	Simple_repeat	1	93	(0)	1008714
18	7.8	0.0	0.0	chr13	29850579	29850605	(84513723)	+	(GGC)n	Simple_repeat	1	27	(0)	1008715
21	17.5	0.0	2.1	chr13	30114788	30114834	(84249494)	+	(GCG)n	Simple_repeat	1	47	(0)	1009142
18	0.0	0.0	0.0	chr13	30307395	30307416	(84056912)	+	(GCC)n	Simple_repeat	1	22	(0)	1009431
1683	15.2	7.2	7.5	chr13	30414692	30415067	(83949261)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1009656
5891	11.8	1.5	2.8	chr13	30415108	30416128	(83948200)	C	L1PA16	LINE/L1	(9)	6157	5156	1009657
2883	9.6	0.0	0.8	chr13	31128103	31128469	(83235859)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1010925
24	23.2	5.3	2.0	chr13	31199925	31200018	(83164310)	+	(GGC)n	Simple_repeat	1	99	(0)	1011022
21	24.9	3.2	4.2	chr13	31200242	31200334	(83163994)	+	(GCGCC)n	Simple_repeat	1	96	(0)	1011023
13	22.0	2.0	3.9	chr13	31200559	31200609	(83163719)	+	(CCCGCCC)n	Simple_repeat	1	52	(0)	1011024
2515	11.0	0.3	0.8	chr13	31314783	31315139	(83049189)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1011143
8902	10.7	3.2	7.1	chr13	31315144	31316433	(83047895)	+	THE1A-int	LTR/ERVL-MaLR	5	1303	(328)	1011143
22	14.8	3.7	1.8	chr13	31846750	31846803	(82517525)	+	(CGCAG)n	Simple_repeat	1	56	(0)	1011913
12	20.5	2.9	0.0	chr13	31846860	31846893	(82517435)	+	(CGG)n	Simple_repeat	1	35	(0)	1011914
1071	27.8	4.9	5.3	chr13	33401318	33401766	(80962562)	+	LTR16B2	LTR/ERVL	9	455	(7)	1014257
32	5.3	0.0	0.0	chr13	34942512	34942550	(79421778)	+	(GCAGCG)n	Simple_repeat	1	39	(0)	1016528
23	25.2	3.6	4.3	chr13	34942640	34942652	(79421676)	+	G-rich	Low_complexity	1	21	(95)	1016529
12	20.2	0.0	6.7	chr13	34942653	34942697	(79421631)	+	(GCCGG)n	Simple_repeat	1	45	(0)	1016530
23	25.2	3.6	4.3	chr13	34942698	34942751	(79421577)	+	G-rich	Low_complexity	22	116	(0)	1016529
13	18.0	0.0	2.9	chr13	34942836	34942869	(79421459)	+	G-rich	Low_complexity	1	34	(0)	1016531
22	21.9	1.7	1.6	chr13	34942883	34942942	(79421386)	+	(CGG)n	Simple_repeat	1	61	(0)	1016532
2442	21.0	7.2	3.5	chr13	35586299	35587355	(78776973)	C	LTR37-int	LTR/ERV1	(4114)	1104	1	1017330
215	28.2	0.0	0.0	chr13	35587553	35587623	(78776705)	+	MIRc	SINE/MIR	176	246	(22)	1017331
17	23.8	0.0	6.1	chr13	36920033	36920098	(77444230)	+	(CCCGCC)n	Simple_repeat	1	66	(0)	1019275
13	25.7	0.0	0.0	chr13	36920150	36920186	(77444142)	+	(CGG)n	Simple_repeat	1	37	(0)	1019276
31	0.0	0.0	0.0	chr13	36920188	36920216	(77444112)	+	(GCG)n	Simple_repeat	1	29	(0)	1019277
351	21.1	0.0	0.0	chr13	37328290	37328360	(77035968)	+	MIR	SINE/MIR	139	209	(53)	1019857
12	23.7	0.0	4.1	chr13	37328374	37328383	(77035945)	+	(TGTTAT)n	Simple_repeat	1	9	(0)	1019858
2629	8.8	0.8	0.0	chr13	37328384	37328735	(77035593)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1019859
24	24.8	4.6	1.1	chr13	40665765	40665851	(73698477)	+	(GCG)n	Simple_repeat	1	91	(0)	1024468
20	12.0	0.0	0.0	chr13	40665908	40665943	(73698385)	+	(GCCGCC)n	Simple_repeat	1	36	(0)	1024469
12	12.4	5.1	4.9	chr13	40666130	40666168	(73698160)	+	(GGCAGC)n	Simple_repeat	1	41	(0)	1024470
15	4.7	0.0	0.0	chr13	40666509	40666530	(73697798)	+	(CGGA)n	Simple_repeat	1	22	(0)	1024471
14	20.6	2.1	4.1	chr13	40666565	40666612	(73697716)	+	(GCT)n	Simple_repeat	1	49	(0)	1024472
17	18.1	3.1	6.1	chr13	40666644	40666707	(73697621)	+	(CCGC)n	Simple_repeat	1	66	(0)	1024473
15	18.3	0.0	2.6	chr13	40789604	40789642	(73574686)	+	(GAGCCG)n	Simple_repeat	1	39	(0)	1024731
31715	14.7	1.8	1.1	chr13	40875044	40880825	(73483503)	C	HERVE-int	LTR/ERV1	(1914)	5899	1	1024831
346	21.9	0.0	0.0	chr13	41060737	41060809	(73303519)	C	tRNA-Glu-GAG_	tRNA	(2)	73	1	1025161
13	10.4	6.2	0.0	chr13	41060893	41060914	(73303414)	+	(CTG)n	Simple_repeat	1	24	(0)	1025162
35	0.0	0.0	0.0	chr13	41060915	41060946	(73303382)	+	(GCC)n	Simple_repeat	1	32	(0)	1025163
297	31.1	7.5	0.7	chr13	41960604	41960739	(72403589)	C	MIR3	SINE/MIR	(34)	174	29	1026611
17	23.2	3.8	4.9	chr13	42040494	42040572	(72323756)	+	G-rich	Low_complexity	1	82	(0)	1026755
2771	7.6	0.3	0.0	chr13	42712425	42712778	(71651550)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1027781
414	37.7	2.2	1.8	chr13	43137692	43137938	(71226390)	C	MIRb	SINE/MIR	(3)	265	14	1028473
2120	13.6	1.4	0.0	chr13	46606588	46606866	(67757462)	C	AluSz	SINE/Alu	(28)	284	2	1034189
793	20.5	11.6	7.8	chr13	46606867	46607160	(67757168)	C	MER74B	LTR/ERVL	(78)	544	231	1034187
252	25.4	0.0	0.0	chr13	46607199	46607253	(67757075)	C	MER74B	LTR/ERVL	(565)	57	3	1034187
12	20.7	5.1	0.0	chr13	49792354	49792392	(64571936)	+	(CCCGC)n	Simple_repeat	1	41	(0)	1039047
25	19.0	0.0	1.8	chr13	49792507	49792562	(64571766)	+	(GGC)n	Simple_repeat	1	56	(0)	1039048
22	14.9	2.2	0.0	chr13	49792569	49792613	(64571715)	+	G-rich	Low_complexity	1	46	(0)	1039049
13	27.4	0.0	6.2	chr13	49792664	49792727	(64571601)	+	G-rich	Low_complexity	1	64	(0)	1039049
12	31.3	0.0	0.0	chr13	51452554	51452600	(62911728)	+	(GGAGGT)n	Simple_repeat	1	47	(0)	1041601
13	6.5	12.1	0.0	chr13	51452737	51452769	(62911559)	+	(CCTG)n	Simple_repeat	1	37	(0)	1041602
14	28.3	0.0	5.6	chr13	51452898	51452968	(62911360)	+	(GGAGTGG)n	Simple_repeat	1	71	(0)	1041603
2662	8.3	0.6	0.3	chr13	52015473	52015820	(62348508)	+	THE1A	LTR/ERVL-MaLR	1	349	(6)	1042431
12065	8.9	0.2	0.1	chr13	52015829	52017405	(62346923)	+	THE1A-int	LTR/ERVL-MaLR	2	1580	(0)	1042431
2718	9.6	0.0	0.3	chr13	52017406	52017761	(62346567)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1042431
349	31.6	4.5	4.2	chr13	52017782	52018022	(62346306)	+	L4_B_Mam	LINE/RTE-X	4698	4939	(2)	1042429
44	0.0	0.0	0.0	chr13	52455636	52455675	(61908653)	+	(GCGGTG)n	Simple_repeat	1	40	(0)	1043143
27	0.0	0.0	0.0	chr13	52600454	52600479	(61763849)	+	(GCCCA)n	Simple_repeat	1	26	(0)	1043341
13	22.1	4.1	2.0	chr13	52652663	52652711	(61711617)	+	G-rich	Low_complexity	1	51	(0)	1043445
2586	10.5	0.6	0.6	chr13	53335560	53335923	(61028405)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1044506
309	25.8	0.0	9.2	chr13	53335924	53335985	(61028343)	+	MLT1J1	LTR/ERVL-MaLR	81	134	(277)	1044505
368	26.2	11.4	4.3	chr13	53336023	53336195	(61028133)	+	MLT1J1	LTR/ERVL-MaLR	233	409	(2)	1044505
22	13.0	0.0	0.0	chr13	53942773	53942806	(60421522)	+	(GA)n	Simple_repeat	1	34	(0)	1045311
344	31.8	6.5	3.4	chr13	53942815	53942993	(60421335)	+	MLT1J1-int	LTR/ERVL-MaLR	969	1153	(234)	1045310
1967	16.2	3.3	2.5	chr13	53943008	53943368	(60420960)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1045312
1775	15.6	4.2	3.7	chr13	55545517	55545895	(58818433)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1047305
2207	13.8	1.4	1.7	chr13	55865183	55865536	(58498792)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	1047694
13341	16.6	1.7	1.7	chr13	55865537	55865780	(58498548)	C	MER52-int	LTR/ERV1	(2935)	4156	3921	1047690
439	33.5	4.1	3.5	chr13	60165163	60165332	(54198996)	+	MIRb	SINE/MIR	48	218	(50)	1053084
34	17.6	6.6	1.8	chr13	60397601	60397706	(53966622)	+	(GGCGGCG)n	Simple_repeat	1	113	(0)	1053464
2253	7.4	0.3	0.0	chr13	60407813	60408109	(53956219)	+	THE1A	LTR/ERVL-MaLR	1	298	(57)	1053481
1698	7.0	0.5	0.0	chr13	60408100	60408313	(53956015)	+	THE1A	LTR/ERVL-MaLR	141	355	(0)	1053482
2637	9.9	0.3	0.0	chr13	61124819	61125172	(53239156)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1054416
233	37.0	6.8	5.6	chr13	61242256	61242426	(53121902)	+	L2	LINE/L2	1104	1267	(2152)	1054552
2499	11.3	0.3	0.0	chr13	61242427	61242780	(53121548)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1054553
233	37.0	6.8	5.6	chr13	61242781	61243158	(53121170)	+	L2	LINE/L2	1268	1660	(1759)	1054552
1255	22.9	2.8	9.2	chr13	61829149	61829388	(52534940)	+	MLT1A0	LTR/ERVL-MaLR	3	219	(146)	1055250
2383	14.6	3.5	0.2	chr13	61829389	61829801	(52534527)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	1055251
1255	22.9	2.8	9.2	chr13	61829802	61829949	(52534379)	+	MLT1A0	LTR/ERVL-MaLR	220	365	(0)	1055250
1493	24.1	5.6	1.1	chr13	61913153	61913605	(52450723)	C	L1ME1	LINE/L1	(29)	6150	5678	1055354
472	28.4	9.9	3.4	chr13	62003794	62004114	(52360214)	+	L1M4	LINE/L1	2200	2543	(4197)	1055473
5050	12.2	3.8	3.8	chr13	62115189	62116025	(52248303)	+	LTR1A2	LTR/ERV1	1	837	(0)	1055598
1337	11.2	26.6	2.2	chr13	62471944	62472216	(51892112)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1056054
1471	14.1	0.5	1.4	chr13	62773909	62774128	(51590200)	C	AluJb	SINE/Alu	(10)	302	85	1056420
17	22.2	1.9	1.8	chr13	62774129	62774182	(51590146)	+	(AATATAT)n	Simple_repeat	1	55	(0)	1056421
680	25.1	8.4	1.0	chr13	62774194	62774591	(51589737)	+	Zaphod	DNA/hAT-Tip100	2989	3418	(613)	1056422
2413	8.5	3.7	0.3	chr13	62878123	62878465	(51485863)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1056555
1466	14.4	0.0	3.1	chr13	62972759	62972790	(51391538)	C	L1MA3	LINE/L1	(0)	6305	6274	1056676
2502	10.5	0.6	0.0	chr13	62972791	62973143	(51391185)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1056677
11102	11.3	0.2	0.1	chr13	62973144	62974721	(51389607)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1056677
1681	19.3	0.3	2.3	chr13	63022119	63022418	(51341910)	+	AluJo	SINE/Alu	2	295	(17)	1056724
5767	15.6	3.4	0.3	chr13	63517091	63518125	(50846203)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(0)	1068	1	1057390
9103	12.8	5.8	3.1	chr13	63529760	63530933	(50833395)	C	L1M1	LINE/L1	(2159)	3830	2591	1057401
2253	12.1	4.5	0.0	chr13	63530934	63531272	(50833056)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1057403
8786	12.6	1.2	0.5	chr13	63531273	63532567	(50831761)	+	THE1A-int	LTR/ERVL-MaLR	1	1304	(276)	1057403
2104	12.3	4.0	2.9	chr13	63579412	63579762	(50784566)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1057470
10859	10.6	2.3	0.0	chr13	63579763	63581305	(50783023)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1057470
2053	12.1	1.4	4.7	chr13	63581306	63581670	(50782658)	C	THE1A	LTR/ERVL-MaLR	(0)	355	3	1057470
1360	22.8	9.7	3.0	chr13	66174913	66175314	(48189014)	+	MLT1C	LTR/ERVL-MaLR	36	467	(0)	1060711
242	23.0	7.5	0.0	chr13	67115198	67115271	(47249057)	+	LTR108e_Mam	LTR/ERVL	167	246	(302)	1061875
1793	14.1	5.9	1.4	chr13	67311569	67311845	(47052483)	C	AluSx	SINE/Alu	(22)	290	1	1062112
14	18.3	2.7	0.0	chr13	68018566	68018602	(46345726)	+	(TGTATT)n	Simple_repeat	1	38	(0)	1062993
1942	23.2	3.6	7.9	chr13	68190899	68191478	(46172850)	+	MLT2B3	LTR/ERVL	1	554	(0)	1063215
1888	11.6	9.2	1.7	chr13	68241216	68241567	(46122761)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1063292
7697	24.6	3.3	1.3	chr13	68320084	68322090	(46042238)	C	L1PA17	LINE/L1	(4727)	2192	357	1063391
2195	13.8	2.8	0.6	chr13	68322092	68322447	(46041881)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1063393
9714	13.3	1.8	3.1	chr13	68322448	68324048	(46040280)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1063393
2638	10.4	0.0	0.0	chr13	68770409	68770763	(45593565)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1063968
2701	12.8	14.2	7.5	chr13	69509320	69509771	(44854557)	C	MER4A	LTR/ERV1	(0)	664	166	1064848
2269	11.9	0.8	1.1	chr13	69509772	69510127	(44854201)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1064849
10881	11.0	2.0	0.0	chr13	69510128	69511675	(44852653)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1064849
2100	12.8	3.1	0.9	chr13	69511676	69512022	(44852306)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1064849
2211	13.4	0.8	1.4	chr13	69614055	69614409	(44749919)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	1065010
1618	15.2	9.2	0.9	chr13	69715195	69715512	(44648816)	+	THE1D	LTR/ERVL-MaLR	1	347	(34)	1065140
4715	18.3	1.4	0.2	chr13	71182166	71182960	(43181368)	C	LTR1E	LTR/ERV1	(0)	804	1	1067130
3915	29.4	8.2	5.5	chr13	71182961	71183215	(43181113)	+	L1ME2	LINE/L1	4972	5190	(956)	1067129
11492	9.8	0.7	0.4	chr13	71345104	71346664	(43017664)	C	THE1A-int	LTR/ERVL-MaLR	(14)	1566	1	1067331
2357	11.4	0.8	0.8	chr13	71346665	71347019	(43017309)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1067331
2526	10.7	0.3	0.3	chr13	71741930	71742284	(42622044)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1067850
63	5.7	0.0	0.0	chr13	71866281	71866354	(42497974)	+	(GCT)n	Simple_repeat	1	74	(0)	1068016
28	19.0	0.0	1.6	chr13	71866385	71866446	(42497882)	+	(CGC)n	Simple_repeat	1	62	(0)	1068017
50	10.8	0.0	0.0	chr13	71866471	71866551	(42497777)	+	(CCG)n	Simple_repeat	1	81	(0)	1068018
15	0.0	0.0	0.0	chr13	71866567	71866585	(42497743)	+	(GCC)n	Simple_repeat	1	19	(0)	1068019
15	22.4	0.0	6.8	chr13	71866669	71866727	(42497601)	+	(GAGGTG)n	Simple_repeat	1	59	(0)	1068020
13	26.4	0.0	3.8	chr13	71867035	71867087	(42497241)	+	G-rich	Low_complexity	1	53	(0)	1068021
838	13.6	1.5	1.5	chr13	72754160	72754291	(41610037)	C	AluJr	SINE/Alu	(180)	132	1	1069285
1053	16.5	1.2	0.0	chr13	72754310	72754473	(41609855)	C	AluJo	SINE/Alu	(10)	302	137	1069286
25	19.6	0.0	0.0	chr13	73429584	73429636	(40934692)	+	(AATG)n	Simple_repeat	1	53	(0)	1070540
13	10.8	3.1	3.0	chr13	74575874	74575905	(39788423)	+	(CCGGC)n	Simple_repeat	1	33	(0)	1072129
35	5.4	0.0	0.0	chr13	75480868	75480906	(38883422)	+	(CA)n	Simple_repeat	1	39	(0)	1073408
19	13.9	3.9	3.8	chr13	75482400	75482450	(38881878)	+	(TCCT)n	Simple_repeat	1	53	(0)	1073409
20	16.2	0.0	2.3	chr13	75549747	75549789	(38814539)	+	(GGC)n	Simple_repeat	1	43	(0)	1073544
5823	9.1	2.7	0.1	chr13	76078476	76079240	(38285088)	+	L1PA8	LINE/L1	4771	5553	(619)	1074273
2546	10.2	0.6	0.0	chr13	76079241	76079593	(38284735)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1074274
5823	11.9	2.1	0.8	chr13	76079594	76080209	(38284119)	+	L1PA8	LINE/L1	5554	6172	(0)	1074273
11267	11.3	0.9	0.2	chr13	76086294	76087912	(38276416)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	1074283
1872	15.3	5.5	0.8	chr13	76087913	76088275	(38276053)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1074283
4301	17.2	2.4	0.9	chr13	76088276	76088309	(38276019)	C	L1MA9	LINE/L1	(1579)	4561	4532	1074282
2810	7.0	0.0	0.0	chr13	76726820	76727174	(37637154)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1075138
11621	9.7	0.9	0.2	chr13	76727175	76728740	(37635588)	+	THE1A-int	LTR/ERVL-MaLR	1	1577	(3)	1075138
2139	12.4	4.7	4.1	chr13	76730922	76731283	(37633045)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1075141
2447	23.7	6.2	6.5	chr13	76731284	76732151	(37632177)	+	Zaphod	DNA/hAT-Tip100	237	1082	(2949)	1075140
26	0.0	0.0	0.0	chr13	77326779	77326803	(37037525)	+	(CGC)n	Simple_repeat	1	25	(0)	1076032
20	13.0	0.0	0.0	chr13	77326918	77326952	(37037376)	+	(CCT)n	Simple_repeat	1	35	(0)	1076033
19	24.8	0.0	0.0	chr13	77327025	77327070	(37037258)	+	(GCC)n	Simple_repeat	1	46	(0)	1076034
16	4.3	0.0	3.9	chr13	77329420	77329445	(37034883)	+	(CTC)n	Simple_repeat	1	26	(0)	1076038
14	16.9	0.0	2.9	chr13	77697539	77697573	(36666755)	+	(CCCCGG)n	Simple_repeat	1	35	(0)	1076566
17	22.7	1.9	1.9	chr13	77697597	77697649	(36666679)	+	(CCGCC)n	Simple_repeat	1	54	(0)	1076567
30	25.8	4.7	2.2	chr13	77698061	77698189	(36666139)	+	(GCC)n	Simple_repeat	1	135	(0)	1076568
14	17.5	6.7	0.0	chr13	77698193	77698264	(36666064)	+	G-rich	Low_complexity	1	76	(0)	1076569
12	21.9	1.9	5.6	chr13	77698385	77698437	(36665891)	+	G-rich	Low_complexity	1	54	(0)	1076570
407	32.9	9.4	4.0	chr13	78085352	78085573	(36278755)	C	MIR	SINE/MIR	(3)	259	25	1077049
15	13.7	0.0	5.4	chr13	78085815	78085851	(36278477)	+	(TTCCC)n	Simple_repeat	1	37	(0)	1077050
13	15.4	8.5	2.0	chr13	78085852	78085860	(36278468)	+	(TTCCCC)n	Simple_repeat	2	51	(0)	1077051
18	10.5	0.0	0.0	chr13	79481622	79481652	(34882676)	+	(TTTGT)n	Simple_repeat	1	31	(0)	1079007
777	23.9	2.7	4.8	chr13	79631338	79631596	(34732732)	+	MLT1F-int	LTR/ERVL-MaLR	745	1104	(385)	1079220
338	27.0	0.7	6.2	chr13	79631600	79631761	(34732567)	+	L1MC4a	LINE/L1	4129	4281	(1865)	1079221
2041	22.1	3.6	1.1	chr13	79631738	79631829	(34732499)	+	L1MC4	LINE/L1	1420	1507	(4708)	1079222
896	28.1	10.7	1.2	chr13	79680932	79681259	(34683069)	+	L2	LINE/L2	2632	2994	(425)	1079294
572	10.5	0.0	0.0	chr13	79846368	79846443	(34517885)	+	AluYj4	SINE/Alu	219	294	(17)	1079474
12448	9.6	2.3	0.9	chr13	79957809	79959548	(34404780)	+	L1PA7	LINE/L1	1	1774	(4725)	1079612
21	22.8	6.5	0.0	chr13	80340984	80341060	(34023268)	+	G-rich	Low_complexity	1	82	(0)	1080203
36	2.7	0.0	0.0	chr13	80341176	80341213	(34023115)	+	(GGA)n	Simple_repeat	1	38	(0)	1080204
9925	14.4	1.8	2.2	chr13	80836590	80837420	(33526908)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	809	1080789
2502	11.0	0.3	0.3	chr13	80846089	80846443	(33517885)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1080804
3969	23.8	7.5	2.4	chr13	80846444	80848156	(33516172)	C	L1MC2	LINE/L1	(522)	5822	3945	1080803
1920	14.2	5.3	3.0	chr13	81166808	81167176	(33197152)	C	THE1D	LTR/ERVL-MaLR	(0)	381	4	1081205
2546	10.8	0.3	0.0	chr13	83105973	83106315	(31258013)	+	THE1A	LTR/ERVL-MaLR	1	344	(11)	1083593
11212	10.3	0.6	0.7	chr13	83106321	83107896	(31256432)	+	THE1A-int	LTR/ERVL-MaLR	1	1574	(6)	1083593
409	31.2	8.7	2.9	chr13	83157340	83157362	(31206966)	C	L1MEb	LINE/L1	(5223)	847	822	1083667
1746	14.8	6.3	3.0	chr13	83157363	83157730	(31206598)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1083668
409	31.2	8.7	2.9	chr13	83157731	83158085	(31206243)	C	L1MEb	LINE/L1	(5249)	821	445	1083667
1345	18.6	1.6	4.4	chr13	83451728	83452048	(30912280)	C	L1MA7	LINE/L1	(0)	6291	5980	1084003
34	0.0	2.0	6.0	chr13	83452110	83452158	(30912170)	+	(AAAAC)n	Simple_repeat	1	50	(0)	1084004
12	20.9	2.4	2.4	chr13	83452197	83452237	(30912091)	+	(TTTGATA)n	Simple_repeat	1	42	(0)	1084005
1417	24.8	0.9	7.9	chr13	83452256	83452788	(30911540)	+	MER52D	LTR/ERV1	3	968	(1155)	1084006
478	35.2	4.9	0.5	chr13	83523515	83523728	(30840600)	+	LTR33	LTR/ERVL	1	224	(291)	1084085
2108	15.1	3.6	2.0	chr13	83641846	83642203	(30722125)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1084225
10000	11.6	0.2	0.1	chr13	83642204	83643596	(30720732)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	186	1084225
11514	18.2	2.2	3.0	chr13	84153697	84154747	(30209581)	C	L1PA15-16	LINE/L1	(4813)	2040	977	1084872
2201	15.1	3.0	0.6	chr13	84154748	84155100	(30209228)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	1084875
11216	10.6	0.6	0.0	chr13	84155103	84156673	(30207655)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1084876
2128	15.9	3.3	0.6	chr13	84156674	84157027	(30207301)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1084876
2061	14.9	2.0	1.1	chr13	84308587	84308938	(30055390)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1085072
11543	10.3	0.4	0.1	chr13	84308939	84310512	(30053816)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1085072
2759	22.3	5.7	2.8	chr13	84653180	84653645	(29710683)	C	MER76	LTR/ERVL	(0)	691	221	1085522
1777	12.4	7.7	6.7	chr13	84653646	84654016	(29710312)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1085523
2759	22.3	5.7	2.8	chr13	84654017	84654218	(29710110)	C	MER76	LTR/ERVL	(471)	220	3	1085522
566	31.0	16.3	1.6	chr13	84775586	84775893	(29588435)	C	L2a	LINE/L2	(5)	3421	3060	1085685
2102	10.5	8.2	0.9	chr13	85049641	85049967	(29314361)	C	THE1A	LTR/ERVL-MaLR	(2)	353	1	1086024
2181	11.1	0.7	0.0	chr13	85051182	85051490	(29312838)	C	AluSq	SINE/Alu	(0)	313	1	1086027
2295	11.9	0.6	1.4	chr13	85051502	85051859	(29312469)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1086024
2353	11.8	2.8	0.0	chr13	85775271	85775619	(28588709)	+	THE1B	LTR/ERVL-MaLR	6	364	(0)	1086983
194	39.6	1.0	0.0	chr13	85775675	85775770	(28588558)	C	L2a	LINE/L2	(250)	3125	3029	1086982
2140	11.3	4.8	2.6	chr13	85813392	85813736	(28550592)	C	THE1A	LTR/ERVL-MaLR	(0)	355	3	1087026
1693	16.0	8.4	1.1	chr13	85891429	85891781	(28472547)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1087117
8142	23.2	4.2	4.3	chr13	86514916	86516288	(27848040)	+	L1M4c	LINE/L1	2599	4019	(2357)	1087834
1999	11.5	6.8	0.9	chr13	86516289	86516621	(27847707)	C	THE1A	LTR/ERVL-MaLR	(0)	355	2	1087839
10356	12.4	2.1	0.0	chr13	86516623	86518168	(27846160)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1087839
945	30.0	12.7	2.5	chr13	86528692	86528723	(27835605)	+	MER90a	LTR/ERV1	31	64	(550)	1087852
1868	14.1	7.1	1.4	chr13	86528724	86529082	(27835246)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1087853
945	30.0	12.7	2.5	chr13	86529083	86529527	(27834801)	+	MER90a	LTR/ERV1	65	564	(50)	1087852
1036	30.1	3.1	4.0	chr13	86623997	86624404	(27739924)	C	MER45C	DNA/hAT-Tip100	(0)	953	379	1087985
571	33.1	8.2	1.8	chr13	86624525	86624810	(27739518)	C	MER45C	DNA/hAT-Tip100	(647)	306	1	1087985
2526	11.3	0.3	0.0	chr13	87332065	87332418	(27031910)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1088879
63	0.0	0.0	0.0	chr13	87672855	87672908	(26691420)	+	(GT)n	Simple_repeat	1	54	(0)	1089327
838	16.8	0.0	0.8	chr13	88335303	88335427	(26028901)	C	AluSx	SINE/Alu	(183)	129	6	1090182
1553	15.2	1.6	0.0	chr13	88335457	88335700	(26028628)	C	THE1A	LTR/ERVL-MaLR	(107)	248	1	1090183
675	9.0	0.0	0.0	chr13	88676632	88676720	(25687608)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	277	1090630
1153	13.6	1.1	0.0	chr13	88676748	88676923	(25687405)	C	THE1A	LTR/ERVL-MaLR	(0)	355	178	1090631
9222	23.6	4.2	3.9	chr13	88676929	88677397	(25686931)	C	L1M4	LINE/L1	(748)	5896	5481	1090632
1745	17.0	2.9	9.4	chr13	88712150	88712551	(25651777)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1090665
2133	14.2	0.8	0.8	chr13	88723243	88723597	(25640731)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1090682
5430	12.7	1.7	0.2	chr13	88723598	88724421	(25639907)	+	THE1A-int	LTR/ERVL-MaLR	1	836	(744)	1090682
1087	22.3	0.0	0.5	chr13	88737623	88737828	(25626500)	+	AluJr4	SINE/Alu	3	207	(105)	1090698
867	20.4	0.0	5.4	chr13	88737829	88737981	(25626347)	C	AluJo	SINE/Alu	(55)	257	113	1090699
2561	9.4	0.6	0.8	chr13	88737982	88738336	(25625992)	+	THE1A	LTR/ERVL-MaLR	1	354	(1)	1090700
867	20.4	0.0	5.4	chr13	88738337	88738368	(25625960)	C	AluJo	SINE/Alu	(200)	112	82	1090699
757	35.0	5.8	4.4	chr13	88738380	88738876	(25625452)	+	ERVL-E-int	LTR/ERVL	3457	3960	(1707)	1090701
456	31.8	13.2	1.8	chr13	89626019	89626239	(24738089)	C	MIR	SINE/MIR	(10)	252	3	1091871
11173	10.6	0.4	0.2	chr13	89649820	89651396	(24712932)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1091895
2100	12.5	3.1	1.1	chr13	89651397	89651744	(24712584)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1091895
2747	18.3	1.9	2.8	chr13	90388098	90388269	(23976059)	+	L1MC1	LINE/L1	5133	5308	(838)	1092863
2269	13.0	2.8	1.4	chr13	90388273	90388631	(23975697)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1092866
10724	11.6	1.5	0.1	chr13	90388632	90390190	(23974138)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1092866
10795	10.3	1.7	0.7	chr13	90731592	90732654	(23631674)	+	THE1A-int	LTR/ERVL-MaLR	494	1578	(2)	1093299
2273	12.0	1.1	1.1	chr13	90732657	90733011	(23631317)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1093299
205	29.2	1.0	11.9	chr13	90733054	90733162	(23631166)	C	OldhAT1	DNA/hAT-Ac	(405)	2443	2347	1093301
2395	21.1	4.1	3.0	chr13	91097198	91097708	(23266620)	+	MER68	LTR/ERVL	37	563	(0)	1093779
13	0.0	0.0	0.0	chr13	91348412	91348428	(23015900)	+	(GCG)n	Simple_repeat	1	17	(0)	1094136
14	27.5	1.7	3.3	chr13	91348957	91349016	(23015312)	+	(CGC)n	Simple_repeat	1	61	(0)	1094137
20	23.2	5.2	1.2	chr13	91398518	91398594	(22965734)	+	G-rich	Low_complexity	1	81	(0)	1094194
35	24.4	0.0	0.0	chr13	91398651	91398731	(22965597)	+	(GGC)n	Simple_repeat	1	81	(0)	1094195
11272	10.5	0.3	0.0	chr13	91516146	91517674	(22846654)	C	THE1A-int	LTR/ERVL-MaLR	(44)	1536	3	1094361
2587	9.1	1.4	0.0	chr13	91517677	91518026	(22846302)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1094361
2559	10.4	0.0	0.3	chr13	91877789	91878144	(22486184)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1094866
2309	14.2	1.4	0.6	chr13	91888022	91888382	(22475946)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1094881
2551	9.7	1.1	1.4	chr13	92118998	92119362	(22244966)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1095176
2134	4.4	2.0	1.2	chr13	92119391	92119567	(22244761)	C	AluYe6	SINE/Alu	(0)	310	133	1095177
187	35.6	5.5	8.2	chr13	92311425	92311467	(22052861)	C	L2a	LINE/L2	(181)	3194	3156	1095406
2651	10.2	0.8	0.0	chr13	92311468	92311828	(22052500)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1095407
431	30.1	4.8	5.2	chr13	94161704	94161765	(20202563)	C	MLT1L	LTR/ERVL-MaLR	(1)	609	551	1097895
2151	13.2	1.9	3.2	chr13	94161766	94162134	(20202194)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1097896
2161	12.3	4.1	3.3	chr13	94202295	94202655	(20161673)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1097954
2334	12.2	5.5	0.9	chr13	94453572	94453918	(19910410)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1098318
2109	14.0	4.1	3.3	chr13	94695245	94695605	(19668723)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1098755
22	24.6	1.4	1.4	chr13	94711389	94711458	(19652870)	+	(CCGCGG)n	Simple_repeat	1	70	(0)	1098774
31	5.6	0.0	0.0	chr13	94711553	94711590	(19652738)	+	(GCG)n	Simple_repeat	1	38	(0)	1098775
18	10.3	0.0	3.0	chr13	94711609	94711641	(19652687)	+	(GCG)n	Simple_repeat	1	33	(0)	1098775
14	18.4	2.7	0.0	chr13	94711678	94711714	(19652614)	+	(GCCGCCC)n	Simple_repeat	1	38	(0)	1098776
13	20.6	2.8	8.1	chr13	94713022	94713093	(19651235)	+	(CGCCG)n	Simple_repeat	1	74	(0)	1098778
2136	10.6	1.4	1.4	chr13	95108339	95108635	(19255693)	+	THE1B	LTR/ERVL-MaLR	2	298	(66)	1099422
986	10.7	9.7	0.0	chr13	95108637	95108776	(19255552)	C	AluSx3	SINE/Alu	(1)	310	156	1099423
378	34.0	9.2	5.0	chr13	95108778	95109169	(19255159)	+	L2a	LINE/L2	2969	3424	(2)	1099424
18	3.0	2.4	9.3	chr13	96090805	96090846	(18273482)	+	(CCG)n	Simple_repeat	1	43	(0)	1101086
10633	11.3	3.4	0.1	chr13	96888407	96889934	(17474394)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	1102211
2188	11.7	1.6	2.7	chr13	96889936	96890247	(17474081)	C	THE1B	LTR/ERVL-MaLR	(0)	364	52	1102211
3921	13.7	2.5	1.4	chr13	96890248	96890885	(17473443)	C	LTR9D	LTR/ERV1	(0)	645	1	1102212
1169	27.9	12.4	2.1	chr13	97259912	97260653	(17103675)	C	L2a	LINE/L2	(6)	3420	2573	1102727
1138	16.9	0.0	0.0	chr13	99451536	99451701	(14912627)	+	FRAM	SINE/Alu	1	166	(10)	1106270
35	28.2	1.5	3.7	chr13	99451703	99451782	(14912546)	+	A-rich	Low_complexity	1	78	(0)	1106271
2529	9.7	0.8	1.4	chr13	99451783	99452139	(14912189)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1106272
35	28.2	1.5	3.7	chr13	99452140	99452192	(14912136)	+	A-rich	Low_complexity	79	130	(0)	1106273
25	18.5	1.8	0.0	chr13	99970035	99970109	(14394219)	+	(GCG)n	Simple_repeat	1	76	(0)	1107124
17	22.8	0.0	2.1	chr13	99973843	99973890	(14390438)	+	A-rich	Low_complexity	1	48	(0)	1107130
35	13.9	1.6	0.0	chr13	99981789	99981851	(14382477)	+	(CTC)n	Simple_repeat	1	64	(0)	1107139
14	14.2	0.0	5.7	chr13	99981891	99981925	(14382403)	+	(GGC)n	Simple_repeat	1	35	(0)	1107140
14	12.7	0.0	0.0	chr13	99982137	99982162	(14382166)	+	(GCG)n	Simple_repeat	1	26	(0)	1107141
11	31.8	1.7	1.6	chr13	99982305	99982364	(14381964)	+	(GGCCCC)n	Simple_repeat	1	61	(0)	1107142
9217	14.6	3.6	0.1	chr13	105356969	105358494	(9005834)	+	Tigger1	DNA/TcMar-Tigger	838	2418	(0)	1114602
2151	14.1	1.4	0.6	chr13	105358606	105358954	(9005374)	+	THE1A	LTR/ERVL-MaLR	4	355	(0)	1114603
3568	24.6	1.5	2.6	chr13	105666066	105666633	(8697695)	+	L1MC3	LINE/L1	4440	5005	(1316)	1115011
1683	15.0	7.8	3.5	chr13	105666634	105666978	(8697350)	C	THE1B	LTR/ERVL-MaLR	(1)	363	3	1115012
1725	11.3	15.2	0.0	chr13	106360777	106361077	(8003251)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1115975
2297	12.0	1.7	0.8	chr13	106734654	106735005	(7629323)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1116470
1025	23.7	5.2	4.0	chr13	109452896	109452927	(4911401)	C	L1ME4b	LINE/L1	(359)	533	507	1120071
1934	12.8	9.9	2.7	chr13	109452928	109453264	(4911064)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1120072
1025	24.4	5.3	3.9	chr13	109453265	109453674	(4910654)	C	L1ME4b	LINE/L1	(386)	506	134	1120071
2762	7.9	0.3	0.6	chr13	110544811	110545166	(3819162)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1121370
1162	12.6	1.7	0.0	chr13	110545172	110545345	(3818983)	+	L1MA2	LINE/L1	6128	6304	(0)	1121371
15	13.3	7.5	3.5	chr13	113863835	113863887	(500441)	+	(AGCGCAGC)n	Simple_repeat	1	57	(0)	1125063
15	22.8	3.9	0.0	chr13	113863874	113863924	(500404)	+	(GGCGCAG)n	Simple_repeat	1	53	(0)	1125064
12	27.6	6.2	0.0	chr13	114314573	114314637	(49691)	+	(GCCGCCC)n	Simple_repeat	1	69	(0)	1125515
16	14.0	7.5	0.0	chr14	20343644	20343683	(86700035)	+	(GGC)n	Simple_repeat	1	43	(0)	1127888
330	22.6	4.1	2.1	chr14	20343795	20343889	(86699829)	C	MER46C	DNA/TcMar-Tigger	(241)	97	1	1127889
2323	7.2	0.3	0.7	chr14	20664208	20664498	(86379220)	C	AluSp	SINE/Alu	(13)	300	11	1128425
2571	8.2	0.8	4.9	chr14	20664499	20664740	(86378978)	C	THE1A	LTR/ERVL-MaLR	(121)	234	2	1128423
11972	9.3	0.2	1.2	chr14	20664741	20665912	(86377806)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	426	1128423
18	24.3	1.9	0.0	chr14	21476690	21476742	(85566976)	+	(GCCCC)n	Simple_repeat	1	54	(0)	1129819
8836	18.6	2.3	2.2	chr14	21975592	21978207	(85065511)	C	L1PA16	LINE/L1	(871)	5275	2734	1130583
213	31.1	4.4	11.2	chr14	22283351	22283413	(84760305)	+	L2c	LINE/L2	2705	2763	(656)	1130974
2725	8.0	0.0	0.3	chr14	22283414	22283765	(84759953)	+	THE1A	LTR/ERVL-MaLR	1	351	(4)	1130975
213	31.1	4.4	11.2	chr14	22283766	22283871	(84759847)	+	L2c	LINE/L2	2764	2862	(557)	1130974
185	25.0	0.0	0.0	chr14	22589858	22589901	(84453817)	C	MIR	SINE/MIR	(8)	254	211	1131370
209	24.7	6.1	14.4	chr14	22590047	22590136	(84453582)	C	MIR3	SINE/MIR	(6)	202	121	1131371
2018	6.4	10.8	0.4	chr14	22590192	22590457	(84453261)	C	AluSg	SINE/Alu	(13)	297	1	1131372
2352	8.1	2.3	0.0	chr14	22801502	22801796	(84241922)	+	AluSc	SINE/Alu	1	302	(7)	1131734
15	9.7	0.0	0.0	chr14	22801849	22801870	(84241848)	+	(CA)n	Simple_repeat	1	22	(0)	1131735
1774	10.7	0.0	0.0	chr14	24790169	24790410	(82253308)	+	THE1A-int	LTR/ERVL-MaLR	1339	1580	(0)	1134658
2292	13.7	1.1	0.8	chr14	24790411	24790764	(82252954)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1134658
2682	10.4	1.4	0.9	chr14	25153162	25153588	(81890130)	C	L1MA5A	LINE/L1	(22)	6275	5847	1135184
2048	9.9	0.7	0.7	chr14	25153608	25153912	(81889806)	+	THE1A	LTR/ERVL-MaLR	1	305	(50)	1135185
2274	14.7	3.7	0.5	chr14	25153914	25154357	(81889361)	C	L1MA5A	LINE/L1	(484)	5813	5355	1135184
2697	7.7	0.6	0.3	chr14	25991818	25992171	(81051547)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1136211
537	34.0	3.2	5.0	chr14	25992173	25992495	(81051223)	C	L2a	LINE/L2	(267)	3159	2839	1136212
35	17.1	1.2	3.5	chr14	26597201	26597284	(80446434)	+	G-rich	Low_complexity	1	85	(0)	1137000
28	8.1	0.0	0.0	chr14	26597490	26597529	(80446189)	+	(T)n	Simple_repeat	1	40	(0)	1137001
16	35.7	2.5	3.2	chr14	26597952	26597985	(80445733)	+	(CGC)n	Simple_repeat	1	124	(0)	1137002
26	23.9	2.3	2.2	chr14	26597986	26598072	(80445646)	+	(CGCTGC)n	Simple_repeat	1	89	(0)	1137003
27	22.9	0.9	7.1	chr14	26598275	26598385	(80445333)	+	G-rich	Low_complexity	1	112	(0)	1137004
2220	11.9	3.4	0.3	chr14	28229694	28230037	(78813681)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1139025
11121	10.8	0.8	0.4	chr14	28230038	28231610	(78812108)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1139025
11249	10.2	1.1	0.1	chr14	28683359	28684922	(78358796)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1139552
2576	9.6	0.6	0.0	chr14	28684923	28685275	(78358443)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1139552
18173	14.1	2.9	1.0	chr14	28685276	28688786	(78354932)	C	L1PA15	LINE/L1	(903)	5770	2189	1139551
2136	11.4	0.3	1.7	chr14	30758831	30758987	(76284731)	+	AluSz6	SINE/Alu	128	285	(27)	1142271
339	32.9	1.2	10.6	chr14	30758988	30759140	(76284578)	C	L2a	LINE/L2	(191)	3235	3106	1142270
2464	8.7	0.0	0.0	chr14	31002982	31003290	(76040428)	+	AluSc5	SINE/Alu	1	309	(0)	1142688
1998	17.0	9.6	5.9	chr14	31003291	31003345	(76040373)	+	L1MB3	LINE/L1	6142	6181	(2)	1142684
1903	15.4	12.5	1.6	chr14	31003390	31003772	(76039946)	+	MSTB1	LTR/ERVL-MaLR	1	431	(1)	1142689
17	6.8	6.5	0.0	chr14	31207671	31207701	(75836017)	+	(GGC)n	Simple_repeat	1	33	(0)	1143146
2244	9.8	5.8	2.5	chr14	31473049	31473385	(75570333)	C	THE1D	LTR/ERVL-MaLR	(2)	379	27	1143708
2835	9.0	0.3	1.4	chr14	31473386	31473744	(75569974)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1143709
2244	9.8	5.8	2.5	chr14	31473745	31473772	(75569946)	C	THE1D	LTR/ERVL-MaLR	(355)	26	1	1143708
4624	25.8	9.3	3.5	chr14	32420086	32420909	(74622809)	C	HAL1	LINE/L1	(22)	2485	1645	1145134
36	2.9	0.0	0.0	chr14	32420910	32420944	(74622774)	+	(TG)n	Simple_repeat	1	35	(0)	1145135
4624	25.8	9.3	3.5	chr14	32420945	32422119	(74621599)	C	HAL1	LINE/L1	(863)	1644	358	1145134
400	27.7	11.0	0.0	chr14	34403648	34403777	(72639941)	+	LTR88b	LTR/Gypsy?	661	806	(31)	1147729
17	11.7	0.0	7.0	chr14	34462042	34462084	(72581634)	+	(CCCGCG)n	Simple_repeat	1	43	(0)	1147842
334	27.2	7.1	10.1	chr14	34539085	34539301	(72504417)	C	MIRc	SINE/MIR	(6)	262	53	1148041
12	21.5	8.2	1.5	chr14	34714282	34714342	(72329376)	+	(GCCCCG)n	Simple_repeat	1	66	(0)	1148492
15	19.5	0.0	0.0	chr14	34714549	34714583	(72329135)	+	(CGGCTG)n	Simple_repeat	1	35	(0)	1148493
12	28.7	0.0	2.1	chr14	34874607	34874654	(72169064)	+	(CCCG)n	Simple_repeat	1	48	(0)	1148822
2124	23.1	9.7	4.4	chr14	35168971	35169396	(71874322)	C	L1MEf	LINE/L1	(2982)	3164	2737	1149487
1936	14.1	5.8	1.7	chr14	35169397	35169757	(71873961)	C	THE1D	LTR/ERVL-MaLR	(4)	377	1	1149489
3088	23.1	14.1	7.7	chr14	35169758	35170838	(71872880)	C	L1MEf	LINE/L1	(3410)	2736	1596	1149487
17	14.3	4.0	3.9	chr14	35404653	35404702	(71639016)	+	G-rich	Low_complexity	1	52	(0)	1149965
17	25.0	0.0	4.8	chr14	35534484	35534545	(71509173)	+	G-rich	Low_complexity	1	62	(0)	1150210
19	9.2	2.9	0.0	chr14	35534556	35534596	(71509122)	+	(CCCAGC)n	Simple_repeat	1	42	(0)	1150211
231	33.3	3.3	0.0	chr14	36222999	36223115	(70820603)	C	L4_C_Mam	LINE/RTE-X	(206)	4932	4812	1151288
267	36.0	2.1	0.7	chr14	36968011	36968150	(70075568)	C	L2b	LINE/L2	(253)	3122	2981	1152280
20	0.0	0.0	0.0	chr14	37197388	37197409	(69846309)	+	(A)n	Simple_repeat	1	22	(0)	1152646
2046	15.9	5.2	2.5	chr14	37207096	37207449	(69836269)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1152660
2831	7.3	0.3	0.0	chr14	38180031	38180384	(68863334)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1153952
1965	28.4	5.2	6.7	chr14	38180385	38180866	(68862852)	+	L1MEf	LINE/L1	1121	1607	(4808)	1153950
1997	10.0	1.0	4.6	chr14	38330797	38330962	(68712756)	+	L1PA10	LINE/L1	5855	6017	(151)	1154130
2621	8.8	0.3	1.1	chr14	38330963	38331320	(68712398)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1154131
1997	10.0	1.0	4.6	chr14	38331321	38331479	(68712239)	+	L1PA10	LINE/L1	6018	6168	(0)	1154130
1753	15.2	10.8	0.0	chr14	39139924	39140186	(67903532)	C	AluSx1	SINE/Alu	(17)	295	1	1155209
1885	11.4	13.2	5.2	chr14	39140315	39140478	(67903240)	C	THE1A	LTR/ERVL-MaLR	(0)	355	200	1155210
2072	12.9	2.0	4.2	chr14	39140479	39140787	(67902931)	+	AluSx	SINE/Alu	1	302	(10)	1155211
2453	9.5	2.2	0.6	chr14	41310435	41310783	(65732935)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1157915
11142	10.1	1.5	0.3	chr14	41310788	41311431	(65732287)	+	THE1A-int	LTR/ERVL-MaLR	1	664	(916)	1157915
604	31.5	10.3	6.1	chr14	42907863	42907966	(64135752)	+	L1MEc	LINE/L1	2743	2866	(3453)	1159889
2057	14.4	2.1	5.4	chr14	42907967	42908354	(64135364)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1159901
28	23.1	0.0	3.7	chr14	44897468	44897548	(62146170)	+	(GGC)n	Simple_repeat	1	81	(0)	1162310
17	15.5	0.0	0.0	chr14	44961473	44961501	(62082217)	+	A-rich	Low_complexity	1	29	(0)	1162406
553	35.1	8.7	7.1	chr14	47222056	47222912	(59820806)	+	L1M5	LINE/L1	2115	2981	(3165)	1165277
2431	11.7	0.8	0.0	chr14	47222913	47223264	(59820454)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1165278
553	35.9	7.7	7.9	chr14	47223265	47223341	(59820377)	+	L1M5	LINE/L1	2982	3047	(3099)	1165277
40	20.7	3.2	0.0	chr14	47674786	47674879	(59368839)	+	(CA)n	Simple_repeat	1	97	(0)	1165885
22	20.0	0.0	6.9	chr14	47674984	47675055	(59368663)	+	(GCG)n	Simple_repeat	1	72	(0)	1165886
37	13.6	0.0	2.9	chr14	47675944	47676013	(59367705)	+	GA-rich	Low_complexity	1	70	(0)	1165888
12	15.9	5.7	0.0	chr14	47676109	47676143	(59367575)	+	(GCTGCGA)n	Simple_repeat	1	37	(0)	1165889
2142	14.7	1.1	0.9	chr14	49576628	49576976	(57466742)	+	THE1A	LTR/ERVL-MaLR	4	353	(2)	1168183
1754	14.6	3.3	0.0	chr14	49576977	49577237	(57466481)	+	AluSx1	SINE/Alu	18	287	(25)	1168184
2332	7.0	0.7	0.0	chr14	49687713	49687997	(57355721)	C	AluSc	SINE/Alu	(22)	287	1	1168415
20	25.8	0.0	4.3	chr14	49767563	49767632	(57276086)	+	(CGG)n	Simple_repeat	1	70	(0)	1168591
32	31.1	0.0	3.7	chr14	49767978	49768120	(57275598)	+	(GGC)n	Simple_repeat	1	137	(0)	1168592
16	16.9	0.0	0.0	chr14	49892575	49892601	(57151117)	+	A-rich	Low_complexity	1	27	(0)	1168853
13	27.5	3.8	0.0	chr14	50231395	50231447	(56812271)	+	(GGCGGA)n	Simple_repeat	1	55	(0)	1169571
23	10.4	0.0	4.4	chr14	50231658	50231702	(56812016)	+	(CGG)n	Simple_repeat	1	45	(0)	1169572
13	13.1	2.7	5.3	chr14	50396967	50397003	(56646715)	+	(CCCG)n	Simple_repeat	1	38	(0)	1169909
24	26.0	0.0	5.5	chr14	50532503	50532593	(56511125)	+	(GCC)n	Simple_repeat	1	91	(0)	1170125
241	21.3	12.8	3.9	chr14	50659264	50659341	(56384377)	C	MER58A	DNA/hAT-Charlie	(138)	86	1	1170310
849	21.5	8.7	5.5	chr14	50659417	50659566	(56384152)	+	PrimLTR79	LTR/ERV1	56	210	(293)	1170311
1994	15.6	1.9	0.3	chr14	50659567	50659873	(56383845)	+	AluJb	SINE/Alu	1	312	(0)	1170312
33	19.3	2.3	2.3	chr14	50668015	50668100	(56375618)	+	(CCG)n	Simple_repeat	1	88	(0)	1170319
13	16.3	6.5	6.1	chr14	50668403	50668464	(56375254)	+	G-rich	Low_complexity	1	66	(0)	1170320
16	29.8	1.6	0.0	chr14	51095108	51095183	(55948535)	+	(CCGCC)n	Simple_repeat	1	77	(0)	1170951
15	22.0	2.0	2.0	chr14	52695751	52695799	(54347919)	+	(CCCCG)n	Simple_repeat	1	50	(0)	1173340
20	17.5	0.0	2.1	chr14	52695949	52695995	(54347723)	+	(CCCGC)n	Simple_repeat	1	47	(0)	1173341
14	24.7	0.0	0.0	chr14	52791516	52791554	(54252164)	+	(CACCGC)n	Simple_repeat	1	39	(0)	1173517
14	3.8	3.3	3.2	chr14	52836006	52836025	(54207693)	+	(TTAA)n	Simple_repeat	1	19	(0)	1173626
2134	12.7	0.3	0.0	chr14	52836026	52836316	(54207402)	C	AluSx1	SINE/Alu	(20)	292	1	1173627
2265	15.7	1.1	0.6	chr14	52983596	52983948	(54059770)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1173877
11	22.8	0.0	7.5	chr14	55107922	55107974	(51935744)	+	(CATGAG)n	Simple_repeat	1	53	(0)	1177072
1293	24.9	6.8	3.0	chr14	55398257	55398753	(51644965)	C	L1M5	LINE/L1	(2979)	3167	2651	1177616
439	18.7	0.0	2.6	chr14	55398754	55398830	(51644888)	+	MER3	DNA/hAT-Charlie	35	109	(100)	1177617
2031	13.8	5.3	1.1	chr14	55801470	55801828	(51241890)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1178345
3106	19.7	3.6	7.1	chr14	55801829	55802331	(51241387)	+	LTR8	LTR/ERV1	199	691	(0)	1178344
14	4.3	4.2	0.0	chr14	56118335	56118358	(50925360)	+	(CTCC)n	Simple_repeat	1	25	(0)	1178822
31	15.8	2.7	2.6	chr14	56118584	56118657	(50925061)	+	(GCG)n	Simple_repeat	1	76	(0)	1178823
13	31.1	1.2	4.8	chr14	57390736	57390817	(49652901)	+	G-rich	Low_complexity	1	83	(0)	1180687
13	24.4	0.0	4.3	chr14	57391075	57391121	(49652597)	+	GA-rich	Low_complexity	1	47	(0)	1180688
13	16.4	0.0	10.0	chr14	57391105	57391154	(49652564)	+	(GGC)n	Simple_repeat	1	50	(0)	1180689
13	13.2	0.0	0.0	chr14	57391183	57391207	(49652511)	+	(CAG)n	Simple_repeat	1	25	(0)	1180690
17	14.2	0.0	0.0	chr14	57391477	57391507	(49652211)	+	(GAG)n	Simple_repeat	1	31	(0)	1180691
19	16.5	4.4	5.6	chr14	58637753	58637820	(48405898)	+	GA-rich	Low_complexity	1	71	(0)	1182574
13	20.5	5.8	1.8	chr14	58638246	58638297	(48405421)	+	(CGGCGCG)n	Simple_repeat	1	55	(0)	1182575
1570	12.4	17.9	2.0	chr14	59244009	59244313	(47799405)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1183475
306	27.8	6.2	5.0	chr14	59787055	59787213	(47256505)	C	Tigger16a	DNA/TcMar-Tigger	(0)	957	797	1184166
542	31.3	0.7	2.1	chr14	59787277	59787498	(47256220)	+	MIRb	SINE/MIR	48	257	(5)	1184167
21	22.7	2.9	2.8	chr14	59870814	59870883	(47172835)	+	(CTC)n	Simple_repeat	1	72	(0)	1184293
13	24.6	3.5	3.4	chr14	59870849	59870905	(47172813)	+	(GCT)n	Simple_repeat	1	59	(0)	1184294
206	29.6	14.3	0.9	chr14	61146375	61146483	(45897235)	+	MIR	SINE/MIR	134	259	(3)	1186036
278	29.9	13.0	8.2	chr14	61146568	61146786	(45896932)	+	MIR	SINE/MIR	5	235	(27)	1186037
17	31.6	2.7	0.0	chr14	63045482	63045555	(43998163)	+	(CTG)n	Simple_repeat	1	76	(0)	1188630
15	25.1	4.9	0.0	chr14	63852902	63852962	(43190756)	+	G-rich	Low_complexity	1	64	(0)	1190225
15	31.8	0.0	0.0	chr14	63853205	63853262	(43190456)	+	G-rich	Low_complexity	1	58	(0)	1190226
17	18.5	0.0	0.0	chr14	63854164	63854194	(43189524)	+	(T)n	Simple_repeat	1	31	(0)	1190227
21	20.1	3.0	2.9	chr14	64465366	64465431	(42578287)	+	(CCCCG)n	Simple_repeat	1	68	(0)	1191351
22	6.7	0.0	0.0	chr14	64503857	64503888	(42539830)	+	(GTGC)n	Simple_repeat	1	32	(0)	1191408
13	9.3	0.0	0.0	chr14	64503883	64503905	(42539813)	+	(GCCC)n	Simple_repeat	1	23	(0)	1191409
19	10.4	5.1	6.5	chr14	64504805	64504863	(42538855)	+	(CCGCGCG)n	Simple_repeat	1	62	(0)	1191410
938	29.4	12.1	0.4	chr14	64872186	64872666	(42171052)	+	L2a	LINE/L2	2503	3049	(377)	1192016
2586	9.7	1.9	0.0	chr14	64872667	64873018	(42170700)	+	THE1B	LTR/ERVL-MaLR	1	359	(5)	1192017
16	21.0	0.0	4.2	chr14	64972194	64972241	(42071477)	+	(GCCC)n	Simple_repeat	1	48	(0)	1192184
25	16.3	1.5	4.4	chr14	64972255	64972321	(42071397)	+	(GCTCG)n	Simple_repeat	1	68	(0)	1192185
13	22.6	4.2	2.0	chr14	64972343	64972348	(42071370)	+	(GCC)n	Simple_repeat	1	49	(0)	1192186
14	11.6	4.9	4.7	chr14	64972349	64972389	(42071329)	+	(GCCCCT)n	Simple_repeat	1	43	(0)	1192187
1738	17.3	8.1	2.6	chr14	65379700	65380065	(41663653)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	19	1193058
2737	7.0	3.1	0.0	chr14	65380066	65380409	(41663309)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1193059
2205	10.6	4.3	1.6	chr14	65496392	65496756	(41546962)	+	THE1D	LTR/ERVL-MaLR	1	375	(6)	1193280
602	21.9	9.6	3.2	chr14	65496870	65497025	(41546693)	+	MIRb	SINE/MIR	25	191	(77)	1193281
1930	11.7	10.5	0.9	chr14	65684576	65684919	(41358799)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1193557
1823	11.7	8.1	6.7	chr14	66730840	66731214	(40312504)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1194968
25	16.5	1.8	1.8	chr14	67241340	67241395	(39802323)	+	(GGC)n	Simple_repeat	1	57	(0)	1195681
12	11.5	3.3	3.2	chr14	67241593	67241622	(39802096)	+	(GCGG)n	Simple_repeat	1	31	(0)	1195682
11547	10.0	0.8	0.0	chr14	67967301	67968868	(39074850)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1197026
2392	10.2	0.8	1.4	chr14	67968869	67969225	(39074493)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1197026
363	28.8	8.6	2.2	chr14	68098261	68098408	(38945310)	C	L2a	LINE/L2	(0)	3426	3210	1197215
2337	11.3	0.6	1.4	chr14	68098409	68098766	(38944952)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1197216
181	29.5	10.9	0.6	chr14	69476647	69476803	(37566915)	C	L2	LINE/L2	(341)	3078	2904	1199597
1192	13.3	5.2	2.7	chr14	69476804	69476989	(37566729)	C	THE1B	LTR/ERVL-MaLR	(0)	364	174	1199598
1418	12.4	0.0	2.0	chr14	69476990	69477228	(37566490)	C	AluSx	SINE/Alu	(0)	312	85	1199599
4309	23.8	6.7	4.2	chr14	69641905	69642378	(37401340)	C	L1MEc	LINE/L1	(5383)	1017	550	1199936
2759	6.8	0.6	3.5	chr14	69642379	69642744	(37400974)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1199938
4309	23.8	6.7	4.2	chr14	69642745	69643237	(37400481)	C	L1MEc	LINE/L1	(5851)	549	40	1199936
396	32.7	8.0	1.2	chr14	70046399	70046589	(36997129)	+	MIR3	SINE/MIR	6	196	(34)	1200593
32	0.0	0.0	0.0	chr14	70189158	70189187	(36854531)	+	(CCCGCAT)n	Simple_repeat	1	30	(0)	1200822
696	15.1	4.0	0.0	chr14	70262664	70262782	(36780936)	C	THE1A	LTR/ERVL-MaLR	(45)	310	187	1200933
315	26.4	9.4	2.3	chr14	70262829	70262956	(36780762)	+	MLT1I-int	LTR/ERVL-MaLR	317	454	(933)	1200934
2605	11.0	1.7	0.0	chr14	70263048	70263392	(36780326)	+	THE1A	LTR/ERVL-MaLR	5	355	(0)	1200935
12673	9.4	0.2	0.9	chr14	70263393	70264674	(36779044)	+	THE1A-int	LTR/ERVL-MaLR	1	1284	(296)	1200935
16	19.6	0.0	5.8	chr14	70641859	70641910	(36401808)	+	G-rich	Low_complexity	1	52	(0)	1201468
23	21.0	3.7	3.5	chr14	70641911	70641938	(36401780)	+	(GCGGAG)n	Simple_repeat	3	85	(0)	1201469
15	4.1	4.0	0.0	chr14	70642540	70642564	(36401154)	+	(GCCGC)n	Simple_repeat	1	26	(0)	1201470
23	21.1	1.3	5.1	chr14	70907480	70907557	(36136161)	+	(GGCGGC)n	Simple_repeat	1	79	(0)	1201960
30	16.4	4.5	4.3	chr14	70907604	70907692	(36136026)	+	(CTC)n	Simple_repeat	1	93	(0)	1201961
29	3.2	0.0	0.0	chr14	70907809	70907840	(36135878)	+	(CGG)n	Simple_repeat	1	32	(0)	1201962
826	14.8	0.0	4.9	chr14	71518660	71518770	(35524948)	+	AluJb	SINE/Alu	2	108	(204)	1202948
2707	6.3	1.7	0.0	chr14	71518771	71519119	(35524599)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1202949
826	14.8	0.0	4.9	chr14	71519120	71519149	(35524569)	+	AluJb	SINE/Alu	109	136	(176)	1202948
1131	13.5	0.0	1.8	chr14	71519151	71519313	(35524405)	+	AluJb	SINE/Alu	138	297	(15)	1202950
209	36.3	6.8	3.3	chr14	72924668	72924909	(34118809)	+	L2	LINE/L2	2613	2863	(556)	1205096
12	19.7	0.0	0.0	chr14	73136699	73136727	(33906991)	+	G-rich	Low_complexity	1	29	(0)	1205594
19	3.9	0.0	0.0	chr14	73714419	73714445	(33329273)	+	(CCGCC)n	Simple_repeat	1	27	(0)	1206931
433	30.9	9.5	5.6	chr14	73836929	73837302	(33206416)	C	MamGypLTR1c	LTR/Gypsy	(57)	746	357	1207186
1189	12.7	26.4	0.0	chr14	73837327	73837546	(33206172)	C	AluSz	SINE/Alu	(13)	299	1	1207187
264	25.0	3.5	9.3	chr14	74745299	74745387	(32298331)	C	L1M4	LINE/L1	(3652)	2494	2407	1209084
1967	14.9	4.1	6.2	chr14	74745388	74745596	(32298122)	C	THE1B	LTR/ERVL-MaLR	(0)	364	165	1209088
2318	8.1	0.0	0.0	chr14	74745597	74745881	(32297837)	+	AluYj4	SINE/Alu	26	310	(1)	1209089
31	0.0	0.0	0.0	chr14	77027305	77027333	(30016385)	+	(GCG)n	Simple_repeat	1	29	(0)	1213464
58	4.8	0.0	0.0	chr14	77027419	77027483	(30016235)	+	(TGC)n	Simple_repeat	1	65	(0)	1213465
23	17.4	0.0	0.0	chr14	77027487	77027531	(30016187)	+	(CGC)n	Simple_repeat	1	45	(0)	1213466
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
16	24.0	0.0	5.1	chr14	77616376	77616434	(29427284)	+	(CCCCG)n	Simple_repeat	1	59	(0)	1214574
18	9.4	2.9	0.0	chr14	77616453	77616486	(29427232)	+	(CGGCTG)n	Simple_repeat	1	35	(0)	1214575
12	13.9	0.0	0.0	chr14	77616616	77616639	(29427079)	+	(GGC)n	Simple_repeat	1	24	(0)	1214576
2484	11.1	0.6	0.0	chr14	80335183	80335535	(26708183)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1219049
682	25.5	8.3	3.7	chr14	80668314	80668692	(26375026)	+	L1MEi	LINE/L1	822	1219	(993)	1219504
2601	9.6	1.9	0.0	chr14	80668721	80669075	(26374643)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	1219508
8932	11.2	0.4	0.2	chr14	80823617	80824882	(26218836)	C	THE1B-int	LTR/ERVL-MaLR	(312)	1268	1	1219725
2114	11.9	7.7	2.3	chr14	80824883	80825226	(26218492)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1219725
1133	18.2	0.0	0.6	chr14	80825227	80825408	(26218310)	C	AluJb	SINE/Alu	(131)	181	1	1219724
2675	9.4	0.6	0.0	chr14	87562419	87562770	(19480948)	+	THE1A	LTR/ERVL-MaLR	1	354	(1)	1229167
11400	10.5	0.4	0.2	chr14	87562773	87564348	(19479370)	+	THE1A-int	LTR/ERVL-MaLR	2	1580	(0)	1229167
263	28.7	16.1	0.9	chr14	88562652	88562767	(18480951)	C	MIRb	SINE/MIR	(116)	152	16	1230628
15	34.0	1.1	3.2	chr14	88562934	88563026	(18480692)	+	G-rich	Low_complexity	1	94	(0)	1230629
17	8.6	5.1	2.4	chr14	88563467	88563505	(18480213)	+	G-rich	Low_complexity	1	41	(0)	1230630
2344	9.6	2.0	0.9	chr14	88786545	88786892	(18256826)	+	THE1A	LTR/ERVL-MaLR	1	352	(3)	1230957
14	8.4	0.0	3.7	chr14	88792539	88792565	(18251153)	+	(GCG)n	Simple_repeat	1	27	(0)	1230964
27	0.0	3.3	0.0	chr14	88792942	88792971	(18250747)	+	(CCGAG)n	Simple_repeat	1	31	(0)	1230965
233	24.1	12.2	0.0	chr14	89000549	89000627	(18043091)	+	L2b	LINE/L2	3246	3335	(40)	1231352
12	20.7	2.3	4.4	chr14	89000890	89000933	(18042785)	+	(TCCTT)n	Simple_repeat	1	45	(0)	1231353
2472	11.6	2.8	0.8	chr14	89380053	89380409	(17663309)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1231961
5468	7.6	2.2	0.7	chr14	90238596	90239349	(16804369)	+	MER4E	LTR/ERV1	1	766	(0)	1233538
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
15	21.9	0.0	6.7	chr14	90397289	90397295	(16646423)	+	(TTTTTTG)n	Simple_repeat	1	13	(47)	1233835
16	3.4	6.2	2.9	chr14	90397296	90397327	(16646391)	+	(TTGT)n	Simple_repeat	1	34	(0)	1233836
15	21.9	0.0	6.7	chr14	90397328	90397348	(16646370)	+	(TTTTTTG)n	Simple_repeat	14	60	(0)	1233835
251	20.2	7.7	4.5	chr14	91032333	91032420	(16011298)	+	MLT1L	LTR/ERVL-MaLR	502	592	(18)	1234881
295	33.8	13.4	3.0	chr14	91032431	91032729	(16010989)	C	L2c	LINE/L2	(33)	3354	3020	1234882
1283	24.0	4.5	7.2	chr14	91032762	91032891	(16010827)	+	L1ME3B	LINE/L1	5272	5392	(850)	1234883
12	13.3	5.7	2.7	chr14	91509766	91509800	(15533918)	+	(GCC)n	Simple_repeat	1	37	(0)	1235827
23	8.2	2.4	2.4	chr14	91510015	91510055	(15533663)	+	(CCG)n	Simple_repeat	1	42	(0)	1235828
24	22.4	1.3	3.8	chr14	93115402	93115479	(13928239)	+	(CCGC)n	Simple_repeat	1	79	(0)	1238816
18	18.4	4.1	0.0	chr14	93115477	93115525	(13928193)	+	(GGCTGA)n	Simple_repeat	1	51	(0)	1238817
273	35.9	2.2	6.2	chr14	94080453	94080645	(12963073)	+	MIRb	SINE/MIR	47	231	(37)	1240579
21	17.8	0.0	0.0	chr14	94080696	94080733	(12962985)	+	A-rich	Low_complexity	1	38	(0)	1240580
13	16.9	3.0	0.0	chr14	94081174	94081206	(12962512)	+	(GCAGCT)n	Simple_repeat	1	34	(0)	1240581
2663	11.0	0.0	0.3	chr14	94135128	94135492	(12908226)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1240686
1968	19.3	8.8	1.5	chr14	94135493	94135888	(12907830)	+	MLT1D	LTR/ERVL-MaLR	72	500	(5)	1240685
2274	10.1	7.7	2.3	chr14	94647607	94647950	(12395768)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1241486
12	17.2	4.9	2.3	chr14	94769800	94769840	(12273878)	+	(CGCGGCCG)n	Simple_repeat	1	43	(0)	1241774
10756	9.6	3.0	0.4	chr14	95283399	95284936	(11758782)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1242717
2601	8.8	0.3	0.3	chr14	95284937	95285291	(11758427)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1242717
13	26.6	2.2	0.0	chr14	96392291	96392336	(10651382)	+	(CCAGCCC)n	Simple_repeat	1	47	(0)	1244788
424	25.7	3.9	3.9	chr14	96392471	96392624	(10651094)	C	MIR3	SINE/MIR	(40)	168	15	1244789
2521	8.4	1.4	0.9	chr14	97007055	97007400	(10036318)	+	THE1A	LTR/ERVL-MaLR	8	355	(0)	1245898
1476	24.9	10.3	3.7	chr14	97268996	97269518	(9774200)	+	Tigger13a	DNA/TcMar-Tigger	139	709	(62)	1246396
2327	10.7	5.0	3.1	chr14	97269519	97269874	(9773844)	C	THE1B	LTR/ERVL-MaLR	(1)	363	1	1246397
1476	24.9	10.3	3.7	chr14	97269875	97269939	(9773779)	+	Tigger13a	DNA/TcMar-Tigger	710	770	(1)	1246396
11521	10.6	1.4	0.0	chr14	97507367	97508924	(9534794)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1246838
2720	9.3	0.3	0.0	chr14	97508925	97509278	(9534440)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1246838
783	21.9	2.5	0.0	chr14	97509316	97509470	(9534248)	+	MLT1E1A	LTR/ERVL-MaLR	495	653	(0)	1246836
2498	7.5	1.7	1.1	chr14	99032105	99032457	(8011261)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1249379
630	31.2	0.5	3.0	chr14	99032458	99032518	(8011200)	C	MIRb	SINE/MIR	(196)	72	12	1249378
47	0.0	0.0	0.0	chr14	99032609	99032650	(8011068)	+	(TGT)n	Simple_repeat	1	42	(0)	1249380
2397	10.3	4.3	3.5	chr14	99085999	99086370	(7957348)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1249473
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
483	23.9	1.1	2.2	chr14	99764290	99764424	(7279294)	C	MIRb	SINE/MIR	(56)	152	9	1250591
297	22.1	0.0	0.0	chr14	99764485	99764552	(7279166)	C	MER5A1	DNA/hAT-Charlie	(97)	69	2	1250592
248	27.3	0.0	3.8	chr14	100155176	100155255	(6888463)	+	Tigger16a	DNA/TcMar-Tigger	126	202	(755)	1251289
17	21.1	1.9	3.7	chr14	100238565	100238617	(6805101)	+	(GGC)n	Simple_repeat	1	54	(0)	1251500
38	23.2	5.4	3.4	chr14	100238902	100239067	(6804651)	+	(GAGGC)n	Simple_repeat	1	175	(0)	1251501
33	22.3	5.6	2.3	chr14	100239072	100239196	(6804522)	+	(CCCG)n	Simple_repeat	1	132	(0)	1251502
2188	21.4	20.3	0.7	chr14	100645427	100646041	(6397677)	C	LTR41	LTR/ERVL	(0)	768	2	1252207
737	33.5	5.0	3.0	chr14	100646099	100646362	(6397356)	C	ERVL-E-int	LTR/ERVL	(66)	5601	5339	1252208
2228	9.1	2.4	0.0	chr14	102315868	102316027	(4727691)	+	AluSz	SINE/Alu	132	294	(18)	1254653
2026	15.1	0.0	0.3	chr14	102567857	102568160	(4475558)	C	AluSx1	SINE/Alu	(9)	303	1	1255198
1446	22.9	1.9	5.9	chr14	102568161	102568345	(4475373)	C	L1M4c	LINE/L1	(5831)	553	364	1255186
2293	25.2	6.7	6.2	chr14	102568346	102568839	(4474879)	C	MER21A	LTR/ERVL	(0)	931	433	1255199
11	25.5	0.0	6.9	chr14	102592248	102592305	(4451413)	+	G-rich	Low_complexity	1	58	(0)	1255258
14	13.0	9.5	0.0	chr14	102592422	102592463	(4451255)	+	(GCCCC)n	Simple_repeat	1	46	(0)	1255259
20	20.2	4.7	1.5	chr14	102592774	102592837	(4450881)	+	(CCCGC)n	Simple_repeat	1	67	(0)	1255260
65	18.6	0.7	0.7	chr14	102592946	102593081	(4450637)	+	(CGCCGC)n	Simple_repeat	1	137	(0)	1255261
22	5.6	2.6	2.5	chr14	102593199	102593237	(4450481)	+	(CCGCGCC)n	Simple_repeat	1	40	(0)	1255262
14	20.8	0.0	0.0	chr14	103385584	103385616	(3658102)	+	(CTC)n	Simple_repeat	1	33	(0)	1256713
424	26.3	8.8	9.6	chr14	104039338	104039402	(3004316)	C	MLT1G3	LTR/ERVL-MaLR	(381)	214	159	1258005
482	33.6	4.1	2.9	chr14	104039414	104039652	(3004066)	C	L2	LINE/L2	(517)	2902	2661	1258008
276	26.2	0.0	1.2	chr14	104039812	104039896	(3003822)	+	L1ME4c	LINE/L1	346	429	(401)	1258009
31	15.8	0.0	7.8	chr14	105021289	105021378	(2022340)	+	(GCCCC)n	Simple_repeat	1	90	(0)	1259101
29	16.8	4.8	5.5	chr14	105248546	105248649	(1795069)	+	G-rich	Low_complexity	1	109	(0)	1259422
14	7.5	3.3	3.2	chr14	105248799	105248828	(1794890)	+	(CGGCG)n	Simple_repeat	1	31	(0)	1259423
20	12.5	7.4	1.7	chr14	105249090	105249143	(1794575)	+	(GCCCGC)n	Simple_repeat	1	58	(0)	1259424
188	18.2	6.4	0.0	chr14	105315799	105315842	(1727876)	C	L2c	LINE/L2	(77)	3310	3264	1259528
1964	17.0	6.7	1.8	chr14	105517390	105517598	(1526120)	+	LOR1b	LTR/ERV1	1	237	(224)	1259784
2736	7.7	0.8	0.0	chr14	105517599	105517950	(1525768)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1259785
1964	17.0	6.7	1.8	chr14	105517951	105518177	(1525541)	+	LOR1b	LTR/ERV1	238	460	(1)	1259784
2468	14.2	1.1	4.3	chr14	106075048	106075158	(968560)	C	L1P4	LINE/L1	(735)	5431	5328	1260291
2373	13.6	0.3	0.0	chr14	106075159	106075511	(968207)	C	THE1A	LTR/ERVL-MaLR	(1)	354	1	1260292
2468	17.6	1.2	4.3	chr14	106075512	106076010	(967708)	C	L1P4	LINE/L1	(819)	5327	4839	1260291
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
3903	11.9	2.0	4.1	chr15	23555549	23556022	(78435167)	+	L1PA16	LINE/L1	4888	5349	(797)	1267613
904	16.0	0.8	0.0	chr15	23556029	23556159	(78435030)	C	AluSx	SINE/Alu	(40)	272	141	1267616
935	10.4	0.7	5.3	chr15	23556163	23556314	(78434875)	+	THE1A	LTR/ERVL-MaLR	211	355	(0)	1267617
337	24.6	15.2	5.0	chr15	25765914	25765950	(76225239)	C	MIRc	SINE/MIR	(26)	182	138	1270477
2544	9.9	2.8	0.0	chr15	25765951	25766295	(76224894)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1270478
49	30.6	1.8	3.4	chr15	29968789	29969017	(72022172)	+	(GCC)n	Simple_repeat	1	233	(0)	1276305
2011	14.9	4.8	1.1	chr15	30880363	30880727	(71110462)	C	THE1D	LTR/ERVL-MaLR	(2)	379	1	1277798
5245	11.4	2.0	1.1	chr15	30880728	30881902	(71109287)	C	L1MA2	LINE/L1	(414)	5890	4696	1277797
16	14.6	2.4	4.7	chr15	31326704	31326745	(70664444)	+	(CCG)n	Simple_repeat	1	43	(0)	1278464
17	22.5	7.5	0.0	chr15	31327009	31327075	(70664114)	+	(CGGCGC)n	Simple_repeat	1	72	(0)	1278465
1696	17.7	0.3	4.0	chr15	32761910	32762238	(69228951)	+	LTR62	LTR/ERVL	1	317	(392)	1280391
2395	10.3	4.5	0.0	chr15	32762242	32762580	(69228609)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1280392
22	18.7	1.5	4.5	chr15	34039161	34039226	(67951963)	+	G-rich	Low_complexity	1	67	(0)	1282165
13	22.1	2.7	0.0	chr15	34367155	34367191	(67623998)	+	(GCA)n	Simple_repeat	1	38	(0)	1282751
29	28.7	3.3	1.6	chr15	37098981	37099101	(64892088)	+	(GGC)n	Simple_repeat	1	125	(0)	1286504
13	15.0	3.3	0.0	chr15	37099077	37099106	(64892083)	+	(GCA)n	Simple_repeat	1	31	(0)	1286505
20	10.1	3.1	0.0	chr15	37099168	37099199	(64891990)	+	(CA)n	Simple_repeat	1	33	(0)	1286506
12	11.2	6.9	0.0	chr15	42272849	42272877	(59718312)	+	GA-rich	Low_complexity	1	31	(0)	1294835
19	21.6	1.6	4.6	chr15	44195183	44195246	(57795943)	+	(CCT)n	Simple_repeat	1	65	(0)	1298354
230	25.0	4.3	13.7	chr15	45199296	45199397	(56791792)	+	L2b	LINE/L2	3275	3366	(9)	1300217
1062	11.8	4.2	0.0	chr15	47161746	47161906	(54829283)	C	THE1C	LTR/ERVL-MaLR	(0)	375	208	1303002
2538	11.7	0.0	0.3	chr15	47161909	47162251	(54828938)	+	THE1C	LTR/ERVL-MaLR	34	375	(0)	1303003
12	5.5	0.0	0.0	chr15	50686568	50686586	(51304603)	+	(CTC)n	Simple_repeat	1	19	(0)	1308294
15	6.7	2.9	5.6	chr15	50686809	50686843	(51304346)	+	(GCGGC)n	Simple_repeat	1	36	(0)	1308295
27	15.8	1.4	4.3	chr15	51737235	51737303	(50253886)	+	(CCCCAC)n	Simple_repeat	1	70	(0)	1309992
12	27.1	0.0	3.9	chr15	51737517	51737568	(50253621)	+	(CGGAGC)n	Simple_repeat	1	52	(0)	1309993
18	19.9	0.0	0.0	chr15	51737671	51737710	(50253479)	+	(CCT)n	Simple_repeat	1	40	(0)	1309994
191	31.8	0.0	0.0	chr15	52018877	52018942	(49972247)	+	L2c	LINE/L2	3306	3371	(16)	1310538
199	21.1	0.0	0.0	chr15	52018907	52018944	(49972245)	+	MIR	SINE/MIR	217	254	(8)	1310539
12	16.3	2.8	2.7	chr15	52019123	52019158	(49972031)	+	G-rich	Low_complexity	1	37	(0)	1310540
27	3.5	0.0	0.0	chr15	52019445	52019474	(49971715)	+	(CGG)n	Simple_repeat	1	30	(0)	1310541
14	23.8	2.8	5.5	chr15	52295645	52295715	(49695474)	+	G-rich	Low_complexity	1	73	(0)	1311056
1188	11.5	0.0	7.8	chr15	55538319	55538509	(46452680)	C	AluSz6	SINE/Alu	(0)	312	137	1315754
12	20.8	6.7	0.0	chr15	55587939	55587983	(46403206)	+	(GCTGCG)n	Simple_repeat	1	48	(0)	1315824
18	30.6	0.0	0.0	chr15	55588184	55588243	(46402946)	+	(CGC)n	Simple_repeat	1	60	(0)	1315825
19	12.0	4.1	3.9	chr15	55588493	55588541	(46402648)	+	(CGCCTC)n	Simple_repeat	1	51	(0)	1315826
35	9.7	5.8	1.4	chr15	56243300	56243421	(45747768)	+	GA-rich	Low_complexity	1	127	(0)	1316884
32	2.1	3.6	5.3	chr15	56243786	56243840	(45747349)	+	(CGC)n	Simple_repeat	1	57	(0)	1316885
11	18.0	3.4	8.2	chr15	56243938	56243996	(45747193)	+	G-rich	Low_complexity	1	61	(0)	1316886
12	20.1	2.9	0.0	chr15	56733162	56733195	(45257994)	+	GA-rich	Low_complexity	1	35	(0)	1317504
21	12.6	0.0	0.0	chr15	56733492	56733527	(45257662)	+	(GAG)n	Simple_repeat	1	36	(0)	1317505
12	14.1	3.0	2.9	chr15	56733745	56733777	(45257412)	+	(GCCAGG)n	Simple_repeat	1	34	(0)	1317506
2536	11.5	2.2	0.6	chr15	57540213	57540570	(44450619)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1318835
23	13.3	3.9	1.9	chr15	59689362	59689412	(42301777)	+	(GGC)n	Simple_repeat	1	53	(0)	1322574
2062	12.4	7.7	1.4	chr15	60106595	60106945	(41884244)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1323263
12234	9.4	0.6	0.5	chr15	60294549	60296122	(41695067)	C	THE1A-int	LTR/ERVL-MaLR	(4)	1576	1	1323560
2792	8.5	0.6	0.0	chr15	60296123	60296474	(41694715)	C	THE1A	LTR/ERVL-MaLR	(0)	355	2	1323560
2125	13.1	1.0	1.0	chr15	60317329	60317618	(41673571)	+	AluJr4	SINE/Alu	1	290	(22)	1323598
2652	10.5	0.6	0.8	chr15	60317626	60317981	(41673208)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1323599
832	20.0	1.1	9.3	chr15	60317982	60318101	(41673088)	+	MER5A	DNA/hAT-Charlie	75	187	(2)	1323597
25	25.7	1.2	2.4	chr15	60592457	60592538	(41398651)	+	(CCG)n	Simple_repeat	1	83	(0)	1324034
33	0.0	0.0	0.0	chr15	60592630	60592660	(41398529)	+	(GGCGGGA)n	Simple_repeat	1	31	(0)	1324035
20	11.6	0.0	8.9	chr15	63042597	63042652	(38948537)	+	G-rich	Low_complexity	1	56	(0)	1327869
13	21.5	2.9	7.1	chr15	63042762	63042829	(38948360)	+	(CCGCCG)n	Simple_repeat	1	70	(0)	1327870
13	8.5	4.0	0.0	chr15	63043037	63043061	(38948128)	+	(CCA)n	Simple_repeat	1	26	(0)	1327871
20	23.1	0.0	3.3	chr15	63121643	63121702	(38869487)	+	GA-rich	Low_complexity	1	60	(0)	1327996
11	21.6	9.3	0.0	chr15	63121768	63121821	(38869368)	+	(CCGCGCC)n	Simple_repeat	1	59	(0)	1327997
17	22.7	1.9	1.8	chr15	63121977	63122030	(38869159)	+	G-rich	Low_complexity	1	55	(0)	1327998
235	24.2	10.2	0.0	chr15	63601064	63601187	(38390002)	+	MIRc	SINE/MIR	23	171	(97)	1328846
44	0.0	0.0	0.0	chr15	63833754	63833791	(38157398)	+	(CA)n	Simple_repeat	1	38	(0)	1329209
14	12.1	0.0	3.5	chr15	63833955	63833983	(38157206)	+	(GGC)n	Simple_repeat	1	29	(0)	1329210
1949	9.7	0.0	12.5	chr15	63845448	63845776	(38145413)	+	AluSx1	SINE/Alu	8	295	(17)	1329238
416	17.6	7.2	5.8	chr15	63845813	63845938	(38145251)	C	L1ME3B	LINE/L1	(82)	6160	6011	1329239
2243	13.7	1.7	0.3	chr15	63846054	63846398	(38144791)	+	THE1A	LTR/ERVL-MaLR	6	355	(0)	1329240
12019	9.0	0.9	0.1	chr15	63846399	63847964	(38143225)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1329240
16	17.0	3.4	4.9	chr15	64460651	64460687	(37530502)	+	(GGCGG)n	Simple_repeat	1	34	(0)	1330440
28	3.3	0.0	0.0	chr15	64460688	64460718	(37530471)	+	(GAGCCG)n	Simple_repeat	1	31	(0)	1330441
16	17.0	3.4	4.9	chr15	64460719	64460739	(37530450)	+	(GGCGG)n	Simple_repeat	5	27	(0)	1330442
189	32.7	0.0	0.0	chr15	65287160	65287214	(36703975)	+	OldhAT1	DNA/hAT-Ac	2019	2073	(775)	1332297
2365	9.7	0.0	1.3	chr15	65426937	65427247	(36563942)	+	AluSq2	SINE/Alu	1	307	(6)	1332597
488	26.5	7.1	1.2	chr15	65427248	65427349	(36563840)	+	Charlie21a	DNA/hAT-Charlie	121	231	(982)	1332596
356	22.1	2.8	3.7	chr15	65427346	65427453	(36563736)	+	Charlie21a	DNA/hAT-Charlie	260	366	(847)	1332598
329	31.2	11.4	0.8	chr15	65517022	65517261	(36473928)	+	MIRc	SINE/MIR	10	260	(8)	1332810
371	25.8	15.1	0.0	chr15	65518078	65518201	(36472988)	+	MIRc	SINE/MIR	14	159	(109)	1332811
11525	8.7	2.6	1.4	chr15	65564768	65566326	(36424863)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1332915
2442	11.7	0.6	2.5	chr15	65566327	65566687	(36424502)	C	THE1A	LTR/ERVL-MaLR	(0)	355	2	1332915
15	12.7	0.0	5.3	chr15	66293695	66293732	(35697457)	+	(CCGCAGC)n	Simple_repeat	1	38	(0)	1334370
23	23.0	3.2	4.2	chr15	66293740	66293832	(35697357)	+	G-rich	Low_complexity	1	96	(0)	1334371
1923	26.6	14.8	3.0	chr15	66315577	66316534	(35674655)	+	L2a	LINE/L2	1716	2810	(609)	1334414
13	18.3	2.6	2.5	chr15	66386883	66386921	(35604268)	+	(TCCCC)n	Simple_repeat	1	40	(0)	1334597
12	12.2	3.7	0.0	chr15	66387261	66387287	(35603902)	+	(GCGCA)n	Simple_repeat	1	28	(0)	1334598
2646	8.0	0.3	0.0	chr15	66581971	66582322	(35408867)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	1334996
2294	12.8	3.9	2.5	chr15	66926618	66926976	(35064213)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1335724
504	18.4	7.6	0.0	chr15	66927037	66927145	(35064044)	C	MER20	DNA/hAT-Charlie	(4)	215	98	1335725
366	30.5	15.3	3.7	chr15	67063858	67064075	(34927114)	+	MIRb	SINE/MIR	7	254	(14)	1336012
11	20.6	5.1	0.0	chr15	67521309	67521347	(34469842)	+	(GCCCCGC)n	Simple_repeat	1	41	(0)	1336753
29	16.2	1.3	5.2	chr15	67542696	67542771	(34448418)	+	(CGC)n	Simple_repeat	1	77	(0)	1336780
12	11.2	3.2	3.1	chr15	67543183	67543213	(34447976)	+	(CCCCTC)n	Simple_repeat	1	32	(0)	1336781
16	31.9	3.9	0.0	chr15	67826678	67826755	(34164434)	+	(GGC)n	Simple_repeat	1	81	(0)	1337187
17	32.6	1.4	0.0	chr15	69045611	69045661	(32945528)	+	(CTCT)n	Simple_repeat	1	51	(0)	1339513
28	5.0	0.0	4.4	chr15	69045662	69045706	(32945483)	+	(TCTT)n	Simple_repeat	1	45	(0)	1339514
435	17.6	5.8	4.2	chr15	69045727	69045845	(32945344)	C	MER113	DNA/hAT-Charlie	(303)	218	98	1339509
210	26.4	4.6	15.2	chr15	69046240	69046436	(32944753)	C	L2a	LINE/L2	(157)	3218	3044	1339502
2482	9.0	2.0	0.9	chr15	69706700	69707045	(32284144)	C	THE1A	LTR/ERVL-MaLR	(5)	350	1	1340759
21	16.2	2.9	5.6	chr15	70097012	70097080	(31894109)	+	G-rich	Low_complexity	1	71	(0)	1341462
17	20.2	2.0	2.0	chr15	70097428	70097476	(31893713)	+	(CTGCCG)n	Simple_repeat	1	50	(0)	1341463
2128	13.7	6.0	0.3	chr15	71068306	71068664	(30922525)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1343159
353	33.6	4.4	4.0	chr15	71068804	71069076	(30922113)	+	L1MC5a	LINE/L1	1421	1694	(1083)	1343160
2356	12.9	1.9	1.1	chr15	71317283	71317643	(30673546)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1343537
529	27.8	4.8	4.0	chr15	71317710	71317947	(30673242)	+	MIRb	SINE/MIR	1	253	(15)	1343538
2751	9.4	0.8	0.0	chr15	71595246	71595597	(30395592)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1344012
423	20.8	5.1	0.4	chr15	71595772	71595882	(30395307)	C	MIRb	SINE/MIR	(44)	186	73	1344013
18	30.1	0.0	1.6	chr15	72117939	72118001	(29873188)	+	(CCG)n	Simple_repeat	1	63	(0)	1344929
19	6.3	2.9	2.8	chr15	72474428	72474462	(29516727)	+	(CCCT)n	Simple_repeat	1	36	(0)	1345546
21	19.5	3.3	1.6	chr15	72474519	72474578	(29516611)	+	(CGGAGC)n	Simple_repeat	1	62	(0)	1345547
25	27.0	1.0	4.0	chr15	72474642	72474752	(29516437)	+	(GGACGA)n	Simple_repeat	1	107	(0)	1345548
13	17.3	3.3	7.9	chr15	72474796	72474856	(29516333)	+	(GGCGGC)n	Simple_repeat	1	63	(0)	1345549
27	3.5	0.0	0.0	chr15	72474867	72474896	(29516293)	+	(CGG)n	Simple_repeat	1	30	(0)	1345550
263	13.2	0.0	0.0	chr15	72796725	72796762	(29194427)	+	MIRc	SINE/MIR	114	151	(117)	1346106
195	36.2	3.1	2.3	chr15	74177845	74177974	(27813215)	+	MamSINE1	SINE/tRNA-RTE	9	139	(151)	1348393
18	16.4	2.4	0.0	chr15	75454670	75454710	(26536479)	+	(CGCGCC)n	Simple_repeat	1	42	(0)	1350823
14	27.3	3.5	0.0	chr15	75578551	75578607	(26412582)	+	G-rich	Low_complexity	1	59	(0)	1351122
13	11.6	3.6	0.0	chr15	75579312	75579339	(26411850)	+	G-rich	Low_complexity	1	29	(0)	1351123
21	24.8	2.7	1.3	chr15	75579480	75579552	(26411637)	+	G-rich	Low_complexity	1	75	(0)	1351124
2777	8.2	0.6	0.3	chr15	75743416	75743769	(26247420)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1351441
620	21.5	5.3	5.3	chr15	75743770	75743809	(26247380)	+	MIRc	SINE/MIR	166	206	(62)	1351440
645	31.4	12.8	2.5	chr15	75743833	75744280	(26246909)	+	L1M5	LINE/L1	3984	4484	(1662)	1351442
711	17.6	2.2	0.8	chr15	75801957	75802088	(26189101)	+	MER94	DNA/hAT-Blackjack	1	134	(0)	1351529
13	15.0	5.1	2.4	chr15	75802299	75802337	(26188852)	+	(CCACCCA)n	Simple_repeat	1	41	(0)	1351530
180	23.5	2.9	0.0	chr15	75802495	75802528	(26188661)	C	MIR3	SINE/MIR	(59)	149	115	1351531
216	30.3	1.3	0.0	chr15	75842893	75842968	(26148221)	C	L2a	LINE/L2	(676)	2743	2667	1351618
12	34.4	2.6	1.2	chr15	75843554	75843631	(26147558)	+	(CGGCCC)n	Simple_repeat	1	80	(0)	1351619
827	28.0	20.8	1.0	chr15	76914338	76915016	(25076173)	+	ERVL-E-int	LTR/ERVL	2984	3744	(1923)	1353216
285	26.9	3.7	0.0	chr15	76915027	76915104	(25076085)	+	ERVL-E-int	LTR/ERVL	3898	3978	(1689)	1353216
2369	10.2	0.0	0.0	chr15	76915105	76915388	(25075801)	+	AluSc8	SINE/Alu	1	284	(27)	1353221
13	25.9	4.0	3.9	chr15	76931545	76931618	(25059571)	+	(CGCCG)n	Simple_repeat	1	77	(0)	1353249
533	23.7	5.3	17.1	chr15	77083509	77083731	(24907458)	+	L1MC5a	LINE/L1	675	903	(1874)	1353517
13	21.9	2.0	3.9	chr15	77419740	77419790	(24571399)	+	G-rich	Low_complexity	1	52	(0)	1354017
14	4.0	7.7	0.0	chr15	77420098	77420123	(24571066)	+	(ACTA)n	Simple_repeat	1	28	(0)	1354018
30	26.2	1.9	1.9	chr15	77420146	77420248	(24570941)	+	(CGCC)n	Simple_repeat	1	105	(0)	1354019
20	28.1	5.2	0.0	chr15	77420206	77420282	(24570907)	+	(CG)n	Simple_repeat	1	81	(0)	1354020
344	33.2	1.7	0.9	chr15	77702489	77702622	(24288567)	C	MIRb	SINE/MIR	(18)	250	116	1354500
13	14.0	10.2	1.9	chr15	77819745	77819793	(24171396)	+	(CCGCGG)n	Simple_repeat	1	54	(0)	1354731
12	31.1	1.8	0.0	chr15	77819965	77820019	(24171170)	+	(CTCTCC)n	Simple_repeat	1	56	(0)	1354732
14	20.7	2.6	0.0	chr15	77820110	77820148	(24171041)	+	(CCCGC)n	Simple_repeat	1	40	(0)	1354733
267	26.7	4.8	4.0	chr15	78113394	78113518	(23877671)	C	MamRep564	Unknown	(91)	266	141	1355228
587	10.5	7.8	1.0	chr15	80704452	80704547	(21286642)	+	L1PA3	LINE/L1	6048	6150	(5)	1359965
15	12.7	6.4	4.0	chr15	81000953	81000999	(20990190)	+	(CGGCGG)n	Simple_repeat	1	50	(0)	1360519
14	5.0	0.0	0.0	chr15	81001815	81001835	(20989354)	+	(AAGG)n	Simple_repeat	1	21	(0)	1360520
2390	9.5	1.7	0.8	chr15	81636918	81637269	(20353920)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1361584
10267	6.5	1.4	0.8	chr15	81637270	81637709	(20353480)	C	L1PB1	LINE/L1	(1716)	4430	3983	1361582
10158	11.4	5.7	1.6	chr15	81918530	81919617	(20071572)	+	THE1D-int	LTR/ERVL-MaLR	465	1579	(1)	1362028
17	17.6	1.7	6.7	chr15	82709459	82709517	(19281672)	+	G-rich	Low_complexity	1	60	(0)	1363302
20	24.8	2.7	2.6	chr15	82810046	82810077	(19181112)	+	(GGCTGG)n	Simple_repeat	1	60	(17)	1363497
13	6.5	5.6	5.3	chr15	82810078	82810113	(19181076)	+	G-rich	Low_complexity	1	38	(0)	1363498
20	24.8	2.7	2.6	chr15	82810114	82810120	(19181069)	+	(GGCTGG)n	Simple_repeat	61	77	(0)	1363497
1018	14.6	12.8	0.0	chr15	82949723	82949900	(19041289)	C	MER3	DNA/hAT-Charlie	(0)	209	6	1363735
288	32.1	13.7	3.4	chr15	82949903	82950260	(19040929)	C	L2a	LINE/L2	(1636)	1783	1383	1363731
43	0.0	0.0	0.0	chr15	83066698	83066737	(18924452)	+	(GCCCG)n	Simple_repeat	1	40	(0)	1363978
12	19.3	0.0	5.1	chr15	83107382	83107420	(18883769)	+	(GCCGCTG)n	Simple_repeat	1	39	(0)	1364072
12	23.4	1.3	9.0	chr15	83107604	83107680	(18883509)	+	G-rich	Low_complexity	1	78	(0)	1364073
1656	10.5	9.9	6.8	chr15	83197784	83198077	(18793112)	+	AluSx3	SINE/Alu	1	304	(7)	1364223
19	17.9	0.0	4.2	chr15	83654105	83654152	(18337037)	+	(GCG)n	Simple_repeat	1	48	(0)	1364951
1679	14.7	0.4	3.2	chr15	84929572	84929856	(17061333)	+	AluJr	SINE/Alu	1	277	(35)	1366937
21	22.1	1.7	1.6	chr15	84981671	84981730	(17009459)	+	(GGCGGC)n	Simple_repeat	1	61	(0)	1367057
14	18.2	0.0	0.0	chr15	84981965	84982000	(17009189)	+	(CCG)n	Simple_repeat	1	36	(0)	1367058
21	27.9	0.0	0.0	chr15	85381487	85381542	(16609647)	+	(TT)n	Simple_repeat	1	56	(0)	1367730
2097	10.2	4.1	0.3	chr15	85807455	85807737	(16183452)	+	AluSc	SINE/Alu	1	294	(15)	1368380
421	14.7	0.0	3.1	chr15	85807738	85807824	(16183365)	+	L1MD1	LINE/L1	3200	3284	(2862)	1368377
1425	12.3	7.7	6.0	chr15	85807826	85808019	(16183170)	+	THE1B	LTR/ERVL-MaLR	92	302	(62)	1368381
2094	13.8	2.9	0.0	chr15	85808020	85808323	(16182866)	C	AluSq2	SINE/Alu	(0)	313	1	1368382
2492	10.9	3.9	0.0	chr15	86285338	86285687	(15705502)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1369199
2155	12.3	0.3	4.0	chr15	88971557	88971880	(13019309)	+	AluSx	SINE/Alu	1	312	(0)	1373353
2151	14.7	0.8	4.8	chr15	88971881	88971918	(13019271)	C	THE1B	LTR/ERVL-MaLR	(328)	36	1	1373352
428	33.6	8.0	2.0	chr15	89334120	89334365	(12656824)	+	MIRb	SINE/MIR	5	266	(2)	1374038
12	13.7	6.2	0.0	chr15	89334445	89334476	(12656713)	+	(ACCCAC)n	Simple_repeat	1	34	(0)	1374039
11	28.2	0.0	2.2	chr15	89334706	89334750	(12656439)	+	(CCCCCGG)n	Simple_repeat	1	45	(0)	1374040
309	26.7	8.2	0.7	chr15	89894364	89894499	(12096690)	C	L1ME3G	LINE/L1	(407)	517	371	1375096
2356	8.2	0.0	1.3	chr15	90930363	90930668	(11060521)	C	AluSz	SINE/Alu	(10)	302	1	1377367
1388	12.3	1.5	0.0	chr15	90993212	90993414	(10997775)	C	AluSx	SINE/Alu	(14)	298	93	1377485
1068	14.2	1.2	0.0	chr15	91022702	91022863	(10968326)	+	AluSx3	SINE/Alu	145	308	(3)	1377543
1574	21.4	11.0	2.4	chr15	91022867	91023282	(10967907)	+	L1MC5a	LINE/L1	1998	2457	(320)	1377544
2573	11.4	0.8	0.3	chr15	91116712	91117073	(10874116)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1377738
2482	9.9	0.8	0.8	chr15	91260666	91261020	(10730169)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1378008
1747	14.0	0.0	0.8	chr15	91261021	91261286	(10729903)	+	AluSx	SINE/Alu	43	306	(6)	1378007
2032	14.0	5.8	3.4	chr15	91737447	91737801	(10253388)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1378776
38	24.4	3.2	1.6	chr15	91737824	91737947	(10253242)	+	(TATA)n	Simple_repeat	1	128	(0)	1378777
15	21.2	3.7	7.1	chr15	92393789	92393800	(9597389)	+	(GCGG)n	Simple_repeat	1	83	(0)	1379798
15	30.8	2.9	0.0	chr15	92393801	92393868	(9597321)	+	G-rich	Low_complexity	1	70	(0)	1379799
29	3.2	0.0	0.0	chr15	92393898	92393929	(9597260)	+	(CGCTGC)n	Simple_repeat	1	32	(0)	1379800
2891	8.8	0.3	0.0	chr15	92540346	92540699	(9450490)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1380025
251	24.5	12.7	11.9	chr15	92540700	92540774	(9450415)	C	L1ME4a	LINE/L1	(148)	5976	5912	1380024
1719	17.0	9.6	0.0	chr15	92540775	92541086	(9450103)	+	MER2	DNA/TcMar-Tigger	1	345	(0)	1380026
13	23.3	0.0	2.4	chr15	92655438	92655479	(9335710)	+	(GCCGCT)n	Simple_repeat	1	42	(0)	1380169
298	26.4	1.1	6.2	chr15	92655988	92656084	(9335105)	C	MIRb	SINE/MIR	(41)	227	136	1380170
24	26.7	3.1	2.0	chr15	92882610	92882706	(9108483)	+	(GCGGCGG)n	Simple_repeat	1	100	(0)	1380695
16	20.8	2.3	0.0	chr15	92882778	92882821	(9108368)	+	GA-rich	Low_complexity	1	45	(0)	1380696
13	14.2	0.0	5.7	chr15	92883099	92883133	(9108056)	+	G-rich	Low_complexity	1	35	(0)	1380697
8838	12.8	4.6	1.6	chr15	93736871	93739574	(8251615)	C	L1PA13	LINE/L1	(2429)	5152	2331	1382077
2582	8.3	1.7	0.3	chr15	93739575	93739924	(8251265)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1382078
10788	14.3	2.3	1.9	chr15	94037873	94038274	(7952915)	+	L1PA15	LINE/L1	3298	3711	(2435)	1382535
2646	9.3	0.3	0.3	chr15	94038275	94038629	(7952560)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1382536
10788	14.3	2.3	1.9	chr15	94038630	94040223	(7950966)	+	L1PA15	LINE/L1	3712	5304	(842)	1382535
1227	23.2	7.1	8.0	chr15	94177467	94177674	(7813515)	+	MSTD	LTR/ERVL-MaLR	3	218	(178)	1382742
1986	10.4	7.1	6.6	chr15	94177675	94178053	(7813136)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1382743
1227	23.2	7.1	8.0	chr15	94178054	94178242	(7812947)	+	MSTD	LTR/ERVL-MaLR	219	396	(0)	1382742
15	13.8	0.0	12.9	chr15	94845036	94845099	(7146090)	+	(GCC)n	Simple_repeat	1	55	(0)	1383603
245	31.7	6.5	9.6	chr15	95360921	95360981	(6630208)	+	L2c	LINE/L2	3053	3122	(265)	1384331
2118	13.7	3.6	2.5	chr15	95360982	95361341	(6629848)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1384332
245	31.7	6.5	9.6	chr15	95361342	95361551	(6629638)	+	L2c	LINE/L2	3123	3315	(72)	1384331
11252	10.6	0.8	0.2	chr15	95525448	95527013	(6464176)	C	THE1B-int	LTR/ERVL-MaLR	(4)	1576	1	1384572
2177	11.9	2.3	1.7	chr15	96060589	96060939	(5930250)	+	THE1A	LTR/ERVL-MaLR	3	355	(0)	1385319
71	27.5	0.8	3.9	chr15	96331043	96331299	(5659890)	+	(GGC)n	Simple_repeat	1	259	(0)	1385727
15	14.4	4.8	7.6	chr15	96331385	96331447	(5659742)	+	(CCGCCGG)n	Simple_repeat	1	66	(0)	1385728
40	8.1	1.5	1.5	chr15	96331535	96331601	(5659588)	+	(CTC)n	Simple_repeat	1	68	(0)	1385729
631	24.8	9.1	5.4	chr15	97903643	97903864	(4087325)	+	MIRb	SINE/MIR	5	235	(33)	1387829
2081	15.9	0.6	1.4	chr15	97955553	97955909	(4035280)	+	THE1A	LTR/ERVL-MaLR	1	354	(1)	1387913
2187	12.6	4.1	3.6	chr15	98432286	98432647	(3558542)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1388636
17	21.4	2.7	6.6	chr15	100341683	100341756	(1649433)	+	(GCC)n	Simple_repeat	1	76	(0)	1391323
12	27.6	0.0	0.0	chr15	100341846	100341884	(1649305)	+	(CAG)n	Simple_repeat	1	39	(0)	1391324
20	28.8	2.0	4.0	chr15	101251700	101251798	(739391)	+	(CGG)n	Simple_repeat	1	101	(0)	1392534
23	7.1	6.5	2.0	chr15	101277420	101277465	(713724)	+	(CCG)n	Simple_repeat	1	49	(0)	1392581
2828	8.4	0.0	0.0	chr15	101415625	101415979	(575210)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1392757
24	11.2	0.0	0.0	chr15	101489758	101489796	(501393)	+	(CGC)n	Simple_repeat	1	39	(0)	1392850
12	23.5	2.5	0.0	chr15	101489835	101489874	(501315)	+	G-rich	Low_complexity	1	41	(0)	1392851
251	32.6	5.4	3.3	chr15	101490417	101490597	(500592)	+	MIR	SINE/MIR	39	230	(38)	1392852
15	15.3	0.0	5.0	chr15	101723942	101723981	(267208)	+	(GCAGG)n	Simple_repeat	1	40	(0)	1393180
17	3.6	0.0	6.2	chr15	101724553	101724584	(266605)	+	(GGGGC)n	Simple_repeat	1	32	(0)	1393181
24	9.9	8.1	6.2	chr15	101766319	101766392	(224797)	+	(CT)n	Simple_repeat	1	80	(0)	1393237
603	32.5	17.5	1.9	chr16	52803	53424	(90284921)	C	L2a	LINE/L2	(135)	3291	2528	1394121
29	0.0	0.0	0.0	chr16	138719	138745	(90199600)	+	(GGCGCA)n	Simple_repeat	1	27	(0)	1394234
2148	8.1	6.1	1.4	chr16	138924	139219	(90199126)	+	AluSc8	SINE/Alu	1	311	(0)	1394235
198	25.0	6.4	7.4	chr16	1092180	1092274	(89246071)	+	L2b	LINE/L2	3263	3356	(19)	1395493
18	26.1	0.0	8.3	chr16	1379275	1379370	(88958975)	+	(GCCCC)n	Simple_repeat	1	96	(0)	1395811
13	7.2	3.0	5.9	chr16	1379919	1379951	(88958394)	+	(CCTGCA)n	Simple_repeat	1	34	(0)	1395812
13	24.4	2.2	8.6	chr16	1678512	1678602	(88659743)	+	(GCCGAG)n	Simple_repeat	1	93	(0)	1396237
13	20.3	3.6	5.2	chr16	1678843	1678898	(88659447)	+	(GTGGCC)n	Simple_repeat	1	58	(0)	1396238
280	19.2	0.0	0.0	chr16	1904333	1904384	(88433961)	+	MER74B	LTR/ERVL	1	52	(570)	1396623
696	24.8	4.9	0.8	chr16	1904421	1904676	(88433669)	+	MER74B	LTR/ERVL	212	478	(144)	1396623
263	34.2	1.8	2.7	chr16	2128562	2128672	(88209673)	+	MIRb	SINE/MIR	122	231	(37)	1396912
1145	13.5	0.0	0.0	chr16	2128713	2128868	(88209477)	C	AluSx3	SINE/Alu	(20)	291	136	1396913
2229	9.4	0.3	0.0	chr16	2128870	2129156	(88209189)	C	AluSg	SINE/Alu	(18)	292	5	1396914
41	17.9	0.8	8.2	chr16	2214718	2214850	(88123495)	+	(CCG)n	Simple_repeat	1	134	(0)	1397044
2164	12.2	2.3	0.0	chr16	2252512	2252813	(88085532)	+	AluSx3	SINE/Alu	2	310	(1)	1397111
712	18.6	16.7	5.2	chr16	2252814	2252925	(88085420)	+	AluJo	SINE/Alu	161	286	(26)	1397110
507	23.2	0.0	0.0	chr16	2927005	2927099	(87411246)	+	HERVK-int	LTR/ERVK	743	837	(6699)	1398199
1570	24.2	0.0	0.0	chr16	2927166	2927483	(87410862)	+	HERVK-int	LTR/ERVK	847	1164	(6372)	1398199
2412	7.1	0.0	0.0	chr16	2983921	2984215	(87354130)	+	AluSq2	SINE/Alu	1	295	(18)	1398295
652	0.0	0.0	0.0	chr16	3158922	3158993	(87179352)	+	tRNA-Pro-CCA	tRNA	1	72	(3)	1398615
320	28.8	8.8	0.8	chr16	3304824	3304982	(87033363)	+	MIR	SINE/MIR	6	174	(94)	1398928
682	27.8	5.4	4.0	chr16	6675271	6675474	(83662871)	C	MLT1K	LTR/ERVL-MaLR	(82)	513	310	1405695
339	33.1	3.2	3.2	chr16	6675487	6675545	(83662800)	C	MLT1K	LTR/ERVL-MaLR	(349)	246	194	1405695
2181	15.8	4.1	2.8	chr16	6675546	6675904	(83662441)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1405699
339	33.1	3.2	3.2	chr16	6675905	6676031	(83662314)	C	MLT1K	LTR/ERVL-MaLR	(402)	193	61	1405695
18	29.8	1.3	2.6	chr16	9091996	9092072	(81246273)	+	GA-rich	Low_complexity	1	78	(0)	1410575
12	8.4	0.0	6.9	chr16	9092305	9092333	(81246012)	+	(CCGGC)n	Simple_repeat	1	29	(0)	1410576
2050	15.9	0.7	0.0	chr16	10369498	10369805	(79968540)	C	AluSx1	SINE/Alu	(2)	310	1	1413361
1075	23.1	15.2	14.6	chr16	10369806	10369844	(79968501)	C	LTR8B	LTR/ERV1	(173)	647	634	1413360
1912	14.1	8.7	0.8	chr16	10369845	10370195	(79968150)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1413362
14	11.9	2.4	7.0	chr16	11796979	11797020	(78541325)	+	(GCCCCC)n	Simple_repeat	1	43	(0)	1416499
23	17.5	6.9	0.0	chr16	11797030	11797087	(78541258)	+	(CG)n	Simple_repeat	1	62	(0)	1416500
36	25.6	1.2	7.0	chr16	11797137	11797305	(78541040)	+	(GCG)n	Simple_repeat	1	171	(0)	1416501
194	17.5	19.7	1.7	chr16	11797680	11797737	(78540608)	C	MIRb	SINE/MIR	(80)	188	118	1416502
13	14.8	0.0	3.1	chr16	11915172	11915203	(78423142)	+	(CCCCG)n	Simple_repeat	1	32	(0)	1416782
16	13.3	0.0	5.4	chr16	11915554	11915590	(78422755)	+	(GCC)n	Simple_repeat	1	37	(0)	1416783
17	4.3	0.0	0.0	chr16	11915649	11915672	(78422673)	+	(GCT)n	Simple_repeat	1	24	(0)	1416784
35	0.0	0.0	0.0	chr16	11915674	11915705	(78422640)	+	(CCG)n	Simple_repeat	1	32	(0)	1416785
13	22.7	0.0	0.0	chr16	11915898	11915929	(78422416)	+	(GCG)n	Simple_repeat	1	32	(0)	1416786
403	22.9	5.4	0.0	chr16	12343738	12343816	(77994529)	+	L2a	LINE/L2	3341	3424	(2)	1417730
14	15.6	0.0	0.0	chr16	12343823	12343851	(77994494)	+	(TGAA)n	Simple_repeat	1	29	(0)	1417732
2112	11.8	5.8	4.5	chr16	12343895	12344250	(77994095)	+	THE1B	LTR/ERVL-MaLR	4	364	(0)	1417733
288	27.6	12.0	6.4	chr16	12344287	12344526	(77993819)	+	MIR	SINE/MIR	8	255	(7)	1417734
562	23.7	4.8	0.0	chr16	12344422	12344539	(77993806)	+	L2a	LINE/L2	3303	3426	(0)	1417735
1176	19.5	0.0	1.5	chr16	14025193	14025397	(76312948)	C	AluJb	SINE/Alu	(24)	288	87	1421355
195	30.3	11.6	2.0	chr16	14025413	14025513	(76312832)	+	L2a	LINE/L2	3315	3426	(0)	1421356
4063	23.8	6.7	2.2	chr16	14025725	14027717	(76310628)	+	L1MD2	LINE/L1	4237	6336	(23)	1421357
1356	20.8	1.9	7.5	chr16	15170274	15170586	(75167759)	C	L1MC4	LINE/L1	(57)	7985	7680	1423711
2055	13.3	7.1	1.1	chr16	15170601	15170958	(75167387)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1423713
329	29.1	8.6	1.7	chr16	15590919	15591037	(74747308)	C	MIR	SINE/MIR	(10)	252	125	1424781
288	25.5	11.2	6.1	chr16	15591102	15591217	(74747128)	C	MIR	SINE/MIR	(47)	183	56	1424782
4371	18.9	5.2	7.7	chr16	15915845	15916168	(74422177)	C	L1MB5	LINE/L1	(1291)	4855	4522	1425569
2168	13.6	3.3	3.0	chr16	15916169	15916531	(74421814)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1425578
2084	12.7	7.1	1.1	chr16	18082314	18082671	(72255674)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1430448
357	23.5	0.0	2.9	chr16	18983688	18983792	(71354553)	C	L1PA17	LINE/L1	(1)	6165	6064	1432376
18	10.8	0.0	0.0	chr16	18983990	18984019	(71354326)	+	(GGC)n	Simple_repeat	1	30	(0)	1432377
599	29.6	7.2	7.0	chr16	21178399	21178772	(69159573)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	136	1437351
1705	8.5	3.3	0.4	chr16	21178777	21179012	(69159333)	+	THE1B	LTR/ERVL-MaLR	122	364	(0)	1437352
15	23.1	1.9	3.6	chr16	21599621	21599674	(68738671)	+	(GGC)n	Simple_repeat	1	55	(0)	1438246
14	25.3	1.6	4.8	chr16	21599902	21599963	(68738382)	+	G-rich	Low_complexity	1	63	(0)	1438247
314	21.7	0.0	0.0	chr16	22373917	22373985	(67964360)	+	MIR	SINE/MIR	159	227	(35)	1439919
12	29.2	4.8	0.0	chr16	22374339	22374400	(67963945)	+	(CCCTCCG)n	Simple_repeat	1	65	(0)	1439921
12	7.8	7.4	0.0	chr16	22374463	22374489	(67963856)	+	(CCGG)n	Simple_repeat	1	29	(0)	1439922
2549	11.0	2.2	0.0	chr16	23049414	23049769	(67288576)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1441359
33	24.6	1.7	4.1	chr16	23148907	23149025	(67189320)	+	(CGG)n	Simple_repeat	1	121	(0)	1441520
17	17.4	3.5	5.1	chr16	23149397	23149453	(67188892)	+	(AGCG)n	Simple_repeat	1	59	(0)	1441521
21	20.7	2.5	6.0	chr16	23302350	23302430	(67035915)	+	(GCC)n	Simple_repeat	1	83	(0)	1441939
46	5.7	0.0	0.0	chr16	24729669	24729723	(65608622)	+	(GCG)n	Simple_repeat	1	55	(0)	1445420
17	21.6	1.8	3.5	chr16	24730022	24730078	(65608267)	+	(GCCGC)n	Simple_repeat	1	58	(0)	1445421
12	7.8	7.4	0.0	chr16	24730119	24730145	(65608200)	+	(CCCCT)n	Simple_repeat	1	29	(0)	1445422
16	19.6	0.0	5.8	chr16	25049456	25049507	(65288838)	+	A-rich	Low_complexity	1	52	(0)	1446105
2573	17.3	2.5	4.2	chr16	25049628	25050152	(65288193)	+	Tigger3b	DNA/TcMar-Tigger	25	540	(691)	1446106
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
13	11.7	3.6	0.0	chr16	28950961	28950988	(61387357)	+	(GGCGA)n	Simple_repeat	1	29	(0)	1454833
1928	16.3	7.4	2.6	chr16	29250486	29250831	(61087514)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1455412
308	30.7	0.3	6.0	chr16	29250832	29250885	(61087460)	+	L1ME4c	LINE/L1	510	557	(2220)	1455411
241	36.5	10.1	1.2	chr16	29943960	29944266	(60394079)	C	L2c	LINE/L2	(609)	2810	2471	1456923
1935	16.5	0.3	0.7	chr16	29944267	29944569	(60393776)	+	AluJb	SINE/Alu	1	302	(10)	1456932
2221	11.0	0.0	4.6	chr16	30178279	30178467	(60159878)	+	AluSx1	SINE/Alu	134	312	(0)	1457470
229	33.3	18.4	0.0	chr16	30178643	30178810	(60159535)	C	MIRb	SINE/MIR	(35)	233	28	1457472
24	20.8	0.0	1.8	chr16	30335132	30335188	(60003157)	+	GA-rich	Low_complexity	1	57	(0)	1457788
16	19.9	0.0	0.0	chr16	30335313	30335347	(60002998)	+	GA-rich	Low_complexity	1	35	(0)	1457789
501	26.2	9.7	1.5	chr16	30406862	30407082	(59931263)	+	MIRb	SINE/MIR	12	254	(14)	1457954
18	7.7	0.0	0.0	chr16	30698185	30698212	(59640133)	+	(GTG)n	Simple_repeat	1	28	(0)	1458687
207	29.6	6.1	1.8	chr16	30760720	30760829	(59577516)	+	MIR3	SINE/MIR	11	125	(83)	1458815
344	21.8	8.2	0.0	chr16	30760861	30760961	(59577384)	+	MIR3	SINE/MIR	33	142	(66)	1458816
209	13.9	10.4	0.0	chr16	30761073	30761115	(59577230)	+	MIR3	SINE/MIR	99	146	(62)	1458817
241	18.2	17.5	0.0	chr16	30761083	30761148	(59577197)	+	MIRc	SINE/MIR	114	193	(75)	1458818
23	9.1	0.0	0.0	chr16	30814728	30814763	(59523582)	+	(TTCC)n	Simple_repeat	1	36	(0)	1458925
1619	16.4	7.4	0.0	chr16	30814766	30815052	(59523293)	C	AluSg	SINE/Alu	(0)	310	1	1458926
19	11.7	2.7	0.0	chr16	30893950	30893986	(59444359)	+	(CGGGGC)n	Simple_repeat	1	38	(0)	1459122
24	24.8	4.8	2.7	chr16	30894116	30894220	(59444125)	+	(CCGGC)n	Simple_repeat	1	110	(0)	1459123
250	26.2	0.0	3.2	chr16	30894500	30894562	(59443783)	C	L2c	LINE/L2	(0)	3387	3327	1459124
194	28.9	17.8	1.2	chr16	30934838	30934921	(59403424)	C	L2	LINE/L2	(1026)	2393	2293	1459235
250	31.6	8.6	2.3	chr16	30935011	30935185	(59403160)	C	L2	LINE/L2	(1297)	2122	1936	1459235
309	31.9	6.6	0.0	chr16	30935183	30935295	(59403050)	+	L2a	LINE/L2	3305	3425	(1)	1459236
218	35.8	9.1	0.5	chr16	30935320	30935510	(59402835)	C	L2	LINE/L2	(1813)	1606	1398	1459235
1392	28.2	2.4	5.3	chr16	32384381	32384653	(57953692)	C	L1M4b	LINE/L1	(2097)	1342	1080	1461548
2479	11.3	0.6	0.6	chr16	32384654	32385008	(57953337)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1461553
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
1772	16.1	12.0	0.5	chr16	33707206	33707604	(56630741)	+	TAR1	Satellite/telo	1417	1867	(244)	1463096
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
377	20.6	0.0	0.0	chr16	34063794	34063861	(56274484)	+	AluYj4	SINE/Alu	224	291	(20)	1463563
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
26	2.1	7.5	3.5	chr16	34699521	34699573	(55638772)	+	(TGATGATTCCAT)n	Simple_repeat	1	57	(0)	1464055
32	8.3	1.1	6.7	chr16	34919417	34919504	(55418841)	+	(GATTCCATTC)n	Simple_repeat	1	89	(0)	1464244
59	17.5	0.0	0.0	chr16	46830234	46830343	(43508002)	+	GA-rich	Low_complexity	1	110	(0)	1466113
14	8.2	3.9	0.0	chr16	46831050	46831075	(43507270)	+	(CCGC)n	Simple_repeat	1	27	(0)	1466114
20	15.9	0.0	0.0	chr16	46831259	46831293	(43507052)	+	(GC)n	Simple_repeat	1	35	(0)	1466115
11	26.2	6.2	1.4	chr16	46973334	46973348	(43364997)	+	(GCGCCG)n	Simple_repeat	1	67	(0)	1466441
13	25.7	2.1	2.0	chr16	46973349	46973396	(43364949)	+	(CCG)n	Simple_repeat	1	49	(0)	1466442
260	21.7	9.9	6.9	chr16	47143451	47143941	(43194404)	+	LTR12C	LTR/ERV1	122	628	(951)	1466777
22	15.1	1.8	3.6	chr16	47143991	47144079	(43194266)	+	(CCCGC)n	Simple_repeat	1	87	(0)	1466778
14	23.2	5.3	1.7	chr16	47461027	47461083	(42877262)	+	(GCC)n	Simple_repeat	1	60	(0)	1467211
13	28.8	0.0	3.5	chr16	47461309	47461366	(42876979)	+	G-rich	Low_complexity	1	58	(0)	1467212
30	24.1	1.0	4.0	chr16	49856876	49856975	(40481370)	+	(GGC)n	Simple_repeat	1	101	(0)	1471244
20	10.4	4.7	2.2	chr16	49857304	49857386	(40480959)	+	(GGC)n	Simple_repeat	1	85	(0)	1471245
25	22.8	2.5	2.4	chr16	50153139	50153218	(40185127)	+	G-rich	Low_complexity	1	82	(0)	1471932
43	4.3	0.0	0.0	chr16	50153489	50153536	(40184809)	+	(AGC)n	Simple_repeat	1	48	(0)	1471933
41	20.1	4.9	1.6	chr16	50153741	50153867	(40184478)	+	(CAGCGG)n	Simple_repeat	1	131	(0)	1471934
412	31.3	17.5	2.7	chr16	50402112	50402992	(39935353)	+	L2b	LINE/L2	2336	3371	(4)	1472406
28	12.6	1.5	5.8	chr16	50548232	50548299	(39790046)	+	(CCCGC)n	Simple_repeat	1	69	(0)	1472719
2439	10.3	1.1	0.8	chr16	51423157	51423510	(38914835)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1474336
1952	11.3	6.2	1.0	chr16	53512183	53512474	(36825871)	+	AluJr	SINE/Alu	1	308	(4)	1477968
2635	10.5	0.3	0.3	chr16	53512522	53512874	(36825471)	C	THE1A	LTR/ERVL-MaLR	(0)	355	3	1477969
11108	10.1	0.5	0.1	chr16	53512881	53514443	(36823902)	C	THE1A-int	LTR/ERVL-MaLR	(11)	1569	1	1477969
2526	9.4	1.4	5.9	chr16	53514444	53514708	(36823637)	C	THE1A	LTR/ERVL-MaLR	(0)	355	110	1477969
2387	10.1	0.0	1.0	chr16	53514709	53515014	(36823331)	+	AluY	SINE/Alu	1	303	(8)	1477970
3584	17.7	7.7	5.0	chr16	53832721	53832964	(36505381)	C	L1MB4	LINE/L1	(0)	6180	5883	1478514
2446	11.1	0.8	0.0	chr16	53832965	53833316	(36505029)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1478515
3852	17.2	6.8	3.7	chr16	53833317	53834008	(36504337)	C	L1MB4	LINE/L1	(298)	5882	5211	1478514
272	18.3	14.6	1.2	chr16	54560407	54560489	(35777856)	+	L2b	LINE/L2	3274	3369	(6)	1479750
2481	11.4	0.3	1.9	chr16	54560491	54560858	(35777487)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	1479751
342	31.5	4.8	10.6	chr16	54687873	54688022	(35650323)	C	MIR	SINE/MIR	(62)	200	57	1479961
2339	12.8	1.1	3.3	chr16	54688023	54688385	(35649960)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1479962
342	31.5	4.8	10.6	chr16	54688386	54688433	(35649912)	C	MIR	SINE/MIR	(206)	56	15	1479961
1738	27.8	9.6	6.3	chr16	55182880	55183779	(35154566)	C	HAL1b	LINE/L1	(557)	1864	942	1480928
326	29.3	8.4	4.1	chr16	56451994	56452164	(33886181)	+	MIRb	SINE/MIR	3	181	(87)	1483064
232	26.7	5.0	1.6	chr16	56932555	56932644	(33405701)	+	MIR3	SINE/MIR	42	136	(94)	1483995
501	26.6	11.3	1.7	chr16	57447958	57448236	(32890109)	C	MER113	DNA/hAT-Charlie	(0)	521	11	1485091
2125	9.6	6.6	5.8	chr16	57779858	57780159	(32558186)	C	THE1D	LTR/ERVL-MaLR	(63)	318	2	1485738
3199	13.7	8.6	5.6	chr16	57780160	57780229	(32558116)	+	L1MB3	LINE/L1	6072	6136	(47)	1485734
2220	12.0	0.0	0.0	chr16	57780230	57780521	(32557824)	+	AluSx	SINE/Alu	2	293	(19)	1485741
2339	12.9	1.4	0.0	chr16	57988300	57988649	(32349696)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1486230
1961	12.7	3.1	4.9	chr16	58937690	58938077	(31400268)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1488104
60	22.3	2.1	4.1	chr16	67029050	67029240	(23309105)	+	(GGC)n	Simple_repeat	1	195	(0)	1500922
12	9.8	0.0	0.0	chr16	67029661	67029682	(23308663)	+	(GGGC)n	Simple_repeat	1	22	(0)	1500923
15	17.8	2.6	0.0	chr16	67562793	67562830	(22775515)	+	(CGGCGC)n	Simple_repeat	1	39	(0)	1501892
27	23.7	0.0	1.4	chr16	67562863	67562968	(22775377)	+	(GCCC)n	Simple_repeat	1	104	(0)	1501893
12	25.5	0.0	0.0	chr16	67563295	67563331	(22775014)	+	(CCTG)n	Simple_repeat	1	37	(0)	1501894
18	14.8	7.4	1.7	chr16	67652857	67652910	(22685435)	+	(GCG)n	Simple_repeat	1	58	(0)	1502110
19	12.9	0.0	2.7	chr16	68085612	68085648	(22252697)	+	(GCC)n	Simple_repeat	1	37	(0)	1502902
11	24.2	5.5	1.7	chr16	68085649	68085665	(22252680)	+	(AGCTGC)n	Simple_repeat	2	58	(0)	1502903
19	15.8	2.8	0.0	chr16	68085887	68085922	(22252423)	+	(TG)n	Simple_repeat	1	37	(0)	1502904
464	27.9	10.1	1.4	chr16	68528539	68528745	(21809600)	+	MIRb	SINE/MIR	1	227	(41)	1503704
1618	9.9	6.0	14.4	chr16	68529246	68529578	(21808767)	C	AluJo	SINE/Alu	(9)	303	1	1503705
662	26.1	4.4	0.5	chr16	68591682	68591900	(21746445)	C	L1MC4	LINE/L1	(456)	7586	7359	1503818
1043	25.7	10.6	0.6	chr16	68592034	68592219	(21746126)	+	L2a	LINE/L2	2983	3195	(231)	1503819
2310	11.8	3.9	3.6	chr16	68592220	68592579	(21745766)	+	THE1B	LTR/ERVL-MaLR	4	364	(0)	1503820
1043	25.7	10.6	0.6	chr16	68592580	68592733	(21745612)	+	L2a	LINE/L2	3196	3360	(66)	1503819
321	28.2	8.3	6.4	chr16	68780000	68780291	(21558054)	+	L2a	LINE/L2	2914	3227	(199)	1504330
16	17.3	8.1	3.0	chr16	70251620	70251681	(20086664)	+	(CCG)n	Simple_repeat	1	67	(0)	1507543
2525	10.4	0.0	1.4	chr16	71292135	71292451	(19045894)	C	THE1B	LTR/ERVL-MaLR	(0)	364	50	1509400
2659	11.1	4.8	6.1	chr16	71292452	71292942	(19045403)	C	LTR19A	LTR/ERV1	(2)	484	1	1509401
43	4.8	0.0	6.7	chr16	73058654	73058728	(17279617)	+	(GCG)n	Simple_repeat	1	75	(0)	1512337
18	0.0	0.0	0.0	chr16	73070711	73070730	(17267615)	+	(TC)n	Simple_repeat	1	20	(0)	1512351
2209	12.4	4.5	1.6	chr16	74907255	74907624	(15430721)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1515687
346	27.3	1.5	7.7	chr16	74907625	74907726	(15430619)	C	L1MEd	LINE/L1	(6990)	96	4	1515686
254	29.4	7.7	0.0	chr16	75469967	75470109	(14868236)	+	HAL1	LINE/L1	1562	1716	(791)	1516857
1205	25.4	4.0	9.1	chr16	75470112	75470462	(14867883)	+	L2a	LINE/L2	2980	3330	(96)	1516865
1996	16.1	4.0	2.4	chr16	76288001	76288369	(14049976)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1518152
230	37.5	9.4	6.6	chr16	76288371	76288750	(14049595)	+	L2c	LINE/L2	2964	3407	(19)	1518153
2499	10.8	3.3	1.1	chr16	77942069	77942424	(12395921)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1520795
1640	12.8	2.6	0.0	chr16	78094470	78094727	(12243618)	C	L1PA11	LINE/L1	(0)	6174	5910	1521121
2599	7.8	0.6	7.0	chr16	78094730	78095103	(12243242)	C	THE1A	LTR/ERVL-MaLR	(5)	350	1	1521122
4391	8.8	1.0	0.0	chr16	78095104	78095706	(12242639)	C	L1PA11	LINE/L1	(262)	5912	5304	1521121
2930	5.7	0.3	0.0	chr16	78691801	78692154	(11646191)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1522197
262	25.0	0.0	5.6	chr16	78824397	78824468	(11513877)	C	L2a	LINE/L2	(0)	3426	3359	1522473
2707	8.2	0.3	0.3	chr16	78824494	78824848	(11513497)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1522474
2484	10.3	4.2	0.3	chr16	78963782	78964122	(11374223)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1522732
7773	10.6	0.0	0.0	chr16	78964123	78965166	(11373179)	+	THE1A-int	LTR/ERVL-MaLR	1	1044	(536)	1522732
38	6.0	1.9	0.0	chr16	79599176	79599227	(10739118)	+	(CCG)n	Simple_repeat	1	53	(0)	1523834
28	0.0	0.0	0.0	chr16	79599909	79599934	(10738411)	+	(GCC)n	Simple_repeat	1	26	(0)	1523835
16	25.7	0.0	0.0	chr16	79600073	79600118	(10738227)	+	(CCCC)n	Simple_repeat	1	46	(0)	1523836
13	19.7	4.0	3.9	chr16	79600134	79600183	(10738162)	+	(GCTC)n	Simple_repeat	1	52	(0)	1523837
17	15.9	0.0	2.7	chr16	79600218	79600254	(10738091)	+	(GCG)n	Simple_repeat	1	37	(0)	1523838
13	17.6	0.0	6.8	chr16	79770540	79770583	(10567762)	+	(CCCGC)n	Simple_repeat	1	44	(0)	1524122
18	15.5	0.0	0.0	chr16	79770586	79770615	(10567730)	+	A-rich	Low_complexity	1	30	(0)	1524123
2195	12.1	3.4	3.1	chr16	80606655	80607005	(9731340)	+	THE1B	LTR/ERVL-MaLR	3	354	(10)	1525592
359	27.3	0.0	0.0	chr16	80607009	80607085	(9731260)	C	MER81	DNA/hAT-Blackjack	(37)	77	1	1525593
1958	14.4	0.7	0.0	chr16	81029567	81029857	(9308488)	C	AluSz	SINE/Alu	(2)	310	18	1526342
2160	15.9	2.8	0.0	chr16	81029858	81030209	(9308136)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	1526343
1860	14.8	4.6	3.2	chr16	82270925	82271266	(8067079)	C	THE1A	LTR/ERVL-MaLR	(0)	355	9	1528945
14	12.4	2.6	5.0	chr16	84116591	84116629	(6221716)	+	(GCCCCC)n	Simple_repeat	1	40	(0)	1532174
19	16.4	2.4	0.0	chr16	84883132	84883173	(5455172)	+	GA-rich	Low_complexity	1	43	(0)	1533754
13	23.9	3.9	1.9	chr16	85750985	85751035	(4587310)	+	(GGC)n	Simple_repeat	1	53	(0)	1535375
15	10.2	9.1	2.1	chr16	85799767	85799810	(4538535)	+	(GGCCG)n	Simple_repeat	1	48	(0)	1535469
14	29.0	3.2	1.6	chr16	86510251	86510312	(3828033)	+	G-rich	Low_complexity	1	64	(0)	1536782
14	13.0	5.9	0.0	chr16	86510351	86510384	(3827961)	+	G-rich	Low_complexity	1	36	(0)	1536782
27	3.5	0.0	0.0	chr16	86510482	86510511	(3827834)	+	(TCC)n	Simple_repeat	1	30	(0)	1536783
19	20.8	1.7	1.7	chr16	86510512	86510563	(3827782)	+	(CGGCGG)n	Simple_repeat	6	57	(0)	1536784
28	5.3	2.6	0.0	chr16	86510605	86510643	(3827702)	+	(CGG)n	Simple_repeat	1	40	(0)	1536785
2134	11.4	2.0	1.3	chr16	87812938	87813235	(2525110)	+	AluSz	SINE/Alu	1	300	(12)	1539124
5639	25.5	8.7	3.3	chr16	88171873	88174423	(2163922)	+	L1MEc	LINE/L1	36	2736	(3583)	1539632
12	12.4	8.6	0.0	chr16	88784898	88784932	(1553413)	+	(CAGCAGC)n	Simple_repeat	1	38	(0)	1540422
13	16.9	0.0	0.0	chr16	88785075	88785101	(1553244)	+	(CCT)n	Simple_repeat	1	27	(0)	1540423
15	12.2	0.0	0.0	chr16	88803785	88803811	(1534534)	+	(CTTC)n	Simple_repeat	1	27	(0)	1540471
705	27.2	7.1	5.3	chr16	89107500	89107817	(1230528)	C	L1ME2	LINE/L1	(578)	5866	5543	1540807
2890	6.8	0.3	0.0	chr16	89107881	89108234	(1230111)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1540808
719	11.3	0.9	0.8	chr16	89817057	89817172	(521173)	+	FLAM_C	SINE/Alu	6	117	(16)	1541909
2491	9.8	4.4	2.5	chr17	278052	278408	(82979033)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1544925
880	30.0	8.3	5.8	chr17	278409	278801	(82978640)	+	L2a	LINE/L2	2942	3375	(0)	1544923
351	27.1	11.0	0.0	chr17	510520	510648	(82746793)	+	MIRb	SINE/MIR	61	205	(63)	1545286
12	8.0	0.0	9.4	chr17	752273	752304	(82505137)	+	(CCGCC)n	Simple_repeat	1	32	(0)	1545737
189	32.2	5.6	6.3	chr17	1115308	1115433	(82142008)	+	L2b	LINE/L2	3013	3137	(238)	1546377
16	8.5	4.7	6.7	chr17	1456146	1456192	(81801249)	+	(GCC)n	Simple_repeat	1	46	(0)	1547172
39	15.8	1.8	6.2	chr17	1649096	1649206	(81608235)	+	(GCCCC)n	Simple_repeat	1	113	(0)	1547528
2120	13.1	0.0	0.3	chr17	2524080	2524377	(80733064)	+	AluSx4	SINE/Alu	2	298	(12)	1549316
14	8.1	0.0	3.6	chr17	2593500	2593572	(80663869)	+	(GCCCG)n	Simple_repeat	1	70	(0)	1549530
30	0.0	0.0	0.0	chr17	2593591	2593618	(80663823)	+	(GGC)n	Simple_repeat	1	28	(0)	1549531
14	7.8	3.5	3.3	chr17	2593667	2593695	(80663746)	+	(GCG)n	Simple_repeat	1	30	(0)	1549532
30	19.8	9.2	0.0	chr17	2593836	2593944	(80663497)	+	(CCCT)n	Simple_repeat	1	119	(0)	1549533
22	15.5	5.7	4.0	chr17	2594105	2594174	(80663267)	+	(TCC)n	Simple_repeat	1	74	(0)	1549534
2428	10.8	0.8	0.8	chr17	5185169	5185523	(78071918)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1554566
11934	8.4	1.1	0.5	chr17	5185524	5187093	(78070348)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1554566
205	37.3	8.6	2.8	chr17	7280337	7280554	(75976887)	C	L2	LINE/L2	(708)	2711	2480	1558565
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
16	18.6	6.1	0.0	chr17	7614616	7614664	(75642777)	+	(CCGGAG)n	Simple_repeat	1	52	(0)	1559152
41	33.8	1.1	2.1	chr17	7614701	7614891	(75642550)	+	(GCC)n	Simple_repeat	1	193	(0)	1559153
3368	26.6	10.9	4.8	chr17	8138308	8138688	(75118753)	C	L2a	LINE/L2	(1677)	1742	1320	1560160
779	1.2	0.0	0.0	chr17	8138878	8138962	(75118479)	C	tRNA-Ser-TCG	tRNA	(0)	85	1	1560170
13	0.0	14.3	0.0	chr17	8139020	8139047	(75118394)	+	(CCGGCT)n	Simple_repeat	1	32	(0)	1560171
652	1.4	0.0	0.0	chr17	8222831	8222904	(75034537)	C	tRNA-Pro-CCG	tRNA	(1)	74	1	1560361
1232	23.3	4.3	4.9	chr17	8747775	8747824	(74509617)	+	MLT1A0	LTR/ERVL-MaLR	1	49	(316)	1561387
2473	10.6	1.7	0.0	chr17	8747825	8748173	(74509268)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1561388
1232	23.3	4.3	4.9	chr17	8748174	8748451	(74508990)	+	MLT1A0	LTR/ERVL-MaLR	50	327	(38)	1561387
1509	18.6	5.8	6.3	chr17	8762014	8762059	(74495382)	+	MLT1A0	LTR/ERVL-MaLR	1	49	(316)	1561418
2614	9.9	0.3	0.3	chr17	8762060	8762414	(74495027)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1561419
1509	18.6	5.8	6.3	chr17	8762415	8762734	(74494707)	+	MLT1A0	LTR/ERVL-MaLR	50	365	(0)	1561418
548	25.6	21.3	0.2	chr17	8925918	8926321	(74331120)	C	L2a	LINE/L2	(1046)	2373	1862	1561714
2387	11.4	0.8	0.8	chr17	8926416	8926769	(74330672)	C	THE1A	LTR/ERVL-MaLR	(1)	354	1	1561728
2821	7.1	0.3	0.3	chr17	11301842	11302196	(71955245)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1566211
222	20.0	0.0	0.0	chr17	11997717	11997761	(71259680)	C	MIRb	SINE/MIR	(14)	254	210	1567386
22	0.0	3.7	0.0	chr17	11998045	11998071	(71259370)	+	(TC)n	Simple_repeat	1	28	(0)	1567387
12	12.0	0.0	6.5	chr17	11998083	11998113	(71259328)	+	(TCCCT)n	Simple_repeat	1	31	(0)	1567388
262	30.6	2.0	0.0	chr17	12020534	12020631	(71236810)	C	Charlie4z	DNA/hAT-Charlie	(14)	153	54	1567442
21	14.5	0.0	0.0	chr17	12020906	12020943	(71236498)	+	(GCG)n	Simple_repeat	1	38	(0)	1567443
16	21.6	1.7	5.0	chr17	12021285	12021343	(71236098)	+	(CCGCCC)n	Simple_repeat	1	60	(0)	1567444
12	9.7	0.0	0.0	chr17	12789487	12789508	(70467933)	+	(GCCA)n	Simple_repeat	1	22	(0)	1568663
17	19.8	1.7	6.6	chr17	12789616	12789675	(70467766)	+	(GCG)n	Simple_repeat	1	61	(0)	1568664
2312	12.0	1.4	0.3	chr17	13034597	13034947	(70222494)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1569087
2707	11.8	0.0	0.0	chr17	13576896	13577259	(69680182)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1569997
17	20.6	4.0	0.0	chr17	13602592	13602642	(69654799)	+	(GTTT)n	Simple_repeat	1	53	(0)	1570039
13	19.6	0.0	0.0	chr17	14301327	14301356	(68956085)	+	(GCC)n	Simple_repeat	1	30	(0)	1571199
18	7.9	0.0	0.0	chr17	14301576	14301602	(68955839)	+	(CCG)n	Simple_repeat	1	27	(0)	1571200
23	6.9	1.9	7.4	chr17	16000038	16000090	(67257351)	+	G-rich	Low_complexity	1	54	(0)	1574054
15	19.9	0.0	4.5	chr17	16215481	16215524	(67041917)	+	(GCC)n	Simple_repeat	1	44	(0)	1574432
206	33.9	0.0	3.0	chr17	16314418	16314484	(66942957)	C	MIRc	SINE/MIR	(159)	109	45	1574679
638	32.1	8.5	2.8	chr17	16398758	16399113	(66858328)	+	L1MEh	LINE/L1	278	655	(1580)	1574900
251	22.7	17.8	2.0	chr17	16399133	16399334	(66858107)	+	L1MEh	LINE/L1	719	959	(1276)	1574900
1844	15.0	0.7	0.4	chr17	17747783	17748056	(65509385)	+	AluJb	SINE/Alu	1	275	(37)	1577273
432	13.4	4.7	1.2	chr17	17748065	17748139	(65509302)	C	THE1A	LTR/ERVL-MaLR	(76)	279	194	1577274
301	30.5	9.1	11.6	chr17	17748202	17748416	(65509025)	C	L2c	LINE/L2	(77)	3310	3102	1577275
1447	10.0	3.1	8.3	chr17	18087496	18087625	(65169816)	+	MER30	DNA/hAT-Charlie	104	228	(2)	1577924
342	27.8	16.9	2.2	chr17	18362898	18363066	(64894375)	+	MIR	SINE/MIR	18	222	(46)	1578435
12	18.8	2.6	2.6	chr17	19867221	19867258	(63390183)	+	(GCGGCTC)n	Simple_repeat	1	39	(0)	1581428
13	17.1	5.9	6.9	chr17	19867480	19867547	(63389894)	+	G-rich	Low_complexity	1	72	(0)	1581429
14	21.8	0.0	4.3	chr17	19867617	19867662	(63389779)	+	(GGCCC)n	Simple_repeat	1	46	(0)	1581430
13	17.7	5.3	0.0	chr17	19868095	19868132	(63389309)	+	G-rich	Low_complexity	1	40	(0)	1581431
15	5.9	8.1	2.5	chr17	21253038	21253074	(62004367)	+	G-rich	Low_complexity	1	40	(0)	1583926
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26935986	26936392	(56321049)	+	(GAATG)n	Satellite	1	409	(0)	1585984
1545	18.6	0.5	0.9	chr17	26937237	26937936	(56319505)	+	(GAATG)n	Satellite	5	705	(0)	1585990
395	19.4	1.6	0.0	chr17	26937941	26938002	(56319439)	+	AluSc	SINE/Alu	223	285	(24)	1585991
1545	18.6	0.5	0.9	chr17	26938006	26938444	(56318997)	+	(GAATG)n	Satellite	3	440	(0)	1585992
1545	18.6	0.5	0.9	chr17	26938538	26939277	(56318164)	+	(GAATG)n	Satellite	3	736	(0)	1585994
437	12.7	3.1	0.0	chr17	26939289	26939351	(56318090)	+	AluSz6	SINE/Alu	225	289	(23)	1585995
1545	18.6	0.5	0.9	chr17	26939351	26939821	(56317620)	+	(GAATG)n	Satellite	4	474	(0)	1585996
61881	5.7	0.3	0.5	chr17	28231015	28238844	(55018597)	C	HERVE-int	LTR/ERV1	(1)	7812	1	1588311
1813	5.6	0.0	0.0	chr17	28311180	28311392	(54946049)	+	AluY	SINE/Alu	86	298	(13)	1588447
806	19.9	0.7	1.4	chr17	28311417	28311562	(54945879)	C	AluJb	SINE/Alu	(49)	263	119	1588448
2504	8.7	0.0	0.0	chr17	28742791	28743102	(54514339)	+	AluSx1	SINE/Alu	1	312	(0)	1589231
13	23.9	0.0	2.4	chr17	28951407	28951447	(54305994)	+	(CCG)n	Simple_repeat	1	41	(0)	1589656
12	32.6	0.0	1.8	chr17	29292769	29292823	(53964618)	+	(CCCCT)n	Simple_repeat	1	55	(0)	1590285
13	22.8	3.6	3.5	chr17	29293104	29293158	(53964283)	+	(GCGCGG)n	Simple_repeat	1	57	(0)	1590286
346	27.2	7.4	4.6	chr17	30355390	30355483	(52901958)	+	MamRep1879	DNA/hAT-Tip100?	42	145	(71)	1592427
2661	9.6	0.3	0.3	chr17	30355484	30355838	(52901603)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1592428
346	27.2	7.4	4.6	chr17	30355839	30355874	(52901567)	+	MamRep1879	DNA/hAT-Tip100?	146	175	(41)	1592427
241	32.9	0.0	2.4	chr17	30355910	30355993	(52901448)	+	MIRb	SINE/MIR	60	141	(127)	1592429
11855	8.8	0.7	0.1	chr17	30453094	30454663	(52802778)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1592595
2602	10.4	0.3	0.0	chr17	30454664	30455017	(52802424)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1592595
18	25.5	1.6	3.1	chr17	30600796	30600859	(52656582)	+	(CCG)n	Simple_repeat	1	65	(0)	1592819
194	21.9	0.0	0.0	chr17	30824997	30825037	(52432404)	C	MIR	SINE/MIR	(114)	148	108	1593361
1647	10.0	11.6	0.4	chr17	30825044	30825168	(52432273)	+	AluJb	SINE/Alu	1	125	(187)	1593362
16	16.5	3.8	5.5	chr17	31008692	31008744	(52248697)	+	(CCG)n	Simple_repeat	1	55	(0)	1593821
17	20.5	3.9	1.9	chr17	32007641	32007692	(51249749)	+	(CCG)n	Simple_repeat	1	54	(0)	1595844
19	20.9	1.3	6.6	chr17	32341902	32341976	(50915465)	+	G-rich	Low_complexity	1	76	(0)	1596597
18	22.1	7.5	3.0	chr17	32341977	32341991	(50915450)	+	(GGCCG)n	Simple_repeat	5	101	(0)	1596598
18	4.8	0.0	0.0	chr17	32350839	32350860	(50906581)	+	(T)n	Simple_repeat	1	22	(0)	1596624
228	29.0	21.2	1.6	chr17	32409434	32409600	(50847841)	+	MIRb	SINE/MIR	12	232	(36)	1596743
3321	3.3	0.0	0.8	chr17	32409910	32410306	(50847135)	C	L1PA4	LINE/L1	(3)	6152	5759	1596744
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
2130	11.2	6.0	6.5	chr17	32988501	32988883	(50268558)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1597751
19	34.0	1.1	1.1	chr17	33292127	33292216	(49965225)	+	(GCG)n	Simple_repeat	1	91	(0)	1598360
1665	17.0	2.3	0.1	chr17	35296094	35296586	(47960855)	+	L1M2	LINE/L1	5062	5566	(725)	1602053
2651	10.0	1.7	0.0	chr17	35296587	35296935	(47960506)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1602054
5302	9.4	1.3	0.0	chr17	35296936	35297636	(47959805)	+	THE1A-int	LTR/ERVL-MaLR	1	710	(870)	1602054
226	34.7	4.0	1.6	chr17	35809911	35810033	(47447408)	+	MIR1_Amn	SINE/MIR	26	151	(79)	1602854
31	30.8	1.0	0.0	chr17	36545629	36545730	(46711711)	+	(GGC)n	Simple_repeat	1	103	(0)	1604135
239	20.7	1.7	0.0	chr17	37609732	37609789	(45647652)	+	L1ME3E	LINE/L1	6115	6173	(69)	1606177
12	16.8	0.0	0.0	chr17	38352020	38352046	(44905395)	+	(CTCC)n	Simple_repeat	1	27	(0)	1607689
12	19.2	0.0	10.3	chr17	38352297	38352354	(44905087)	+	(CCCTGGA)n	Simple_repeat	1	58	(0)	1607690
18	16.8	6.4	0.0	chr17	38799428	38799474	(44457967)	+	(CGG)n	Simple_repeat	1	50	(0)	1608589
12	23.3	4.4	0.0	chr17	39980700	39980744	(43276697)	+	(TCCTCCA)n	Simple_repeat	1	47	(0)	1611118
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
16	10.7	7.1	2.2	chr17	39981111	39981152	(43276289)	+	(GACGGCA)n	Simple_repeat	1	45	(0)	1611121
106	1.8	3.5	0.0	chr17	40140318	40140430	(43117011)	+	(AC)n	Simple_repeat	1	117	(0)	1611417
18	19.4	0.0	0.0	chr17	40140646	40140686	(43116755)	+	(GCGGCA)n	Simple_repeat	1	41	(0)	1611418
17	11.2	0.0	8.7	chr17	40140786	40140838	(43116603)	+	(GGCGG)n	Simple_repeat	1	48	(0)	1611419
1724	24.3	5.3	1.6	chr17	40738345	40738888	(42518553)	+	MER74B	LTR/ERVL	58	622	(0)	1612580
549	26.4	1.8	1.8	chr17	40903763	40903928	(42353513)	C	L2a	LINE/L2	(0)	3426	3261	1612837
260	35.7	6.8	10.4	chr17	41566981	41567122	(41690319)	C	L3	LINE/CR1	(593)	3328	3110	1613831
71	40.3	0.2	1.6	chr17	41567291	41567720	(41689721)	+	(TCCACC)n	Simple_repeat	1	431	(0)	1613833
13	5.3	0.0	0.0	chr17	41688978	41688997	(41568444)	+	(CCG)n	Simple_repeat	1	20	(0)	1614055
28	19.9	2.6	2.5	chr17	41865324	41865401	(41392040)	+	(GCC)n	Simple_repeat	1	80	(0)	1614463
423	30.2	4.8	1.6	chr17	41930142	41930323	(41327118)	C	MIRc	SINE/MIR	(58)	210	20	1614595
19	15.2	2.5	9.8	chr17	42184176	42184255	(41073186)	+	(GGCGC)n	Simple_repeat	1	82	(0)	1615097
19	7.4	0.0	0.0	chr17	42184480	42184508	(41072933)	+	(GCA)n	Simple_repeat	1	29	(0)	1615098
257	33.0	9.2	1.6	chr17	42184602	42184826	(41072615)	+	L2c	LINE/L2	2989	3238	(149)	1615099
409	13.2	4.2	0.0	chr17	42531893	42531960	(40725481)	+	MER84	LTR/ERV1	7	77	(430)	1615834
424	15.2	0.0	0.0	chr17	42531961	42532019	(40725422)	+	AluSx	SINE/Alu	25	83	(229)	1615835
17	24.2	0.0	0.0	chr17	42532066	42532109	(40725332)	+	(CAG)n	Simple_repeat	1	44	(0)	1615836
35	20.4	1.0	4.1	chr17	42532129	42532225	(40725216)	+	(CGC)n	Simple_repeat	1	98	(0)	1615837
17	13.2	0.0	0.0	chr17	42536275	42536307	(40721134)	+	(GGTGGC)n	Simple_repeat	1	33	(0)	1615844
18	19.8	6.0	2.8	chr17	42536474	42536540	(40720901)	+	(GGC)n	Simple_repeat	1	71	(0)	1615845
29	11.4	0.0	0.0	chr17	42548615	42548662	(40708779)	+	(GGCCGG)n	Simple_repeat	1	48	(0)	1615868
1185	14.2	17.9	0.9	chr17	42548843	42549074	(40708367)	+	AluJr	SINE/Alu	1	280	(32)	1615869
345	27.9	0.0	4.1	chr17	42682162	42682258	(40575183)	+	MIRb	SINE/MIR	81	173	(95)	1616145
38	21.3	9.5	0.6	chr17	42682577	42682724	(40574717)	+	GA-rich	Low_complexity	1	162	(0)	1616146
15	19.6	0.0	0.0	chr17	42682757	42682791	(40574650)	+	(GAGCCC)n	Simple_repeat	1	35	(0)	1616147
16	32.7	1.0	4.8	chr17	42683084	42683187	(40574254)	+	G-rich	Low_complexity	1	105	(0)	1616148
13	22.1	0.0	0.0	chr17	42980635	42980666	(40276775)	+	GA-rich	Low_complexity	1	32	(0)	1616805
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
1957	9.7	7.4	3.0	chr17	43725043	43725403	(39532038)	C	THE1D	LTR/ERVL-MaLR	(3)	378	1	1618480
255	21.5	3.7	3.7	chr17	43725424	43725505	(39531936)	C	MIRc	SINE/MIR	(112)	156	75	1618481
17	13.4	0.0	2.9	chr17	44066597	44066631	(39190810)	+	(GCG)n	Simple_repeat	1	35	(0)	1619168
25	25.5	2.3	2.2	chr17	44123484	44123570	(39133871)	+	(GGC)n	Simple_repeat	1	89	(0)	1619260
292	29.6	3.3	0.0	chr17	44134422	44134509	(39122932)	+	MIR3	SINE/MIR	92	182	(26)	1619294
265	28.6	3.2	0.0	chr17	44142270	44142360	(39115081)	+	MIR3	SINE/MIR	36	129	(79)	1619320
39	24.9	1.0	0.0	chr17	44219550	44219649	(39037792)	+	(GCG)n	Simple_repeat	1	101	(0)	1619463
21	15.4	3.1	6.0	chr17	44219706	44219770	(39037671)	+	(CCG)n	Simple_repeat	1	67	(0)	1619464
20	20.1	0.0	5.2	chr17	44219770	44219827	(39037614)	+	GA-rich	Low_complexity	1	58	(0)	1619465
14	21.1	0.0	6.1	chr17	44219884	44219932	(39037509)	+	(CGCC)n	Simple_repeat	1	49	(0)	1619466
27	0.0	0.0	5.7	chr17	44220905	44220939	(39036502)	+	(CCGC)n	Simple_repeat	1	35	(0)	1619467
2332	9.4	0.3	0.0	chr17	44246336	44246642	(39010799)	+	AluSq	SINE/Alu	1	308	(5)	1619533
12	17.8	6.2	5.9	chr17	44557402	44557465	(38699976)	+	(AGCGAG)n	Simple_repeat	1	68	(0)	1620208
17	22.1	0.0	2.0	chr17	44557636	44557684	(38699757)	+	G-rich	Low_complexity	1	49	(0)	1620209
15	18.9	6.8	3.2	chr17	44557691	44557715	(38699726)	+	(GCC)n	Simple_repeat	1	44	(19)	1620210
18	4.2	0.0	0.0	chr17	44557716	44557740	(38699701)	+	(CTG)n	Simple_repeat	1	25	(0)	1620211
15	18.9	6.8	3.2	chr17	44557741	44557749	(38699692)	+	(GCC)n	Simple_repeat	45	63	(0)	1620210
11	24.6	0.0	2.5	chr17	48543837	48543876	(34713565)	+	(CCCCTC)n	Simple_repeat	1	40	(0)	1628077
38	23.7	4.2	3.4	chr17	48612615	48612756	(34644685)	+	GA-rich	Low_complexity	1	148	(0)	1628143
20	3.5	3.3	0.0	chr17	49003778	49003807	(34253634)	+	(GGGA)n	Simple_repeat	1	31	(0)	1629013
17	4.5	0.0	4.0	chr17	49003973	49003997	(34253444)	+	(AG)n	Simple_repeat	1	25	(0)	1629014
12	28.2	1.7	3.3	chr17	49004032	49004090	(34253351)	+	(CGCCC)n	Simple_repeat	1	60	(0)	1629015
290	26.3	2.6	6.6	chr17	49260777	49260898	(33996543)	C	MIR3	SINE/MIR	(1)	207	91	1629560
24	3.6	0.0	0.0	chr17	49260992	49261020	(33996421)	+	(GT)n	Simple_repeat	1	29	(0)	1629561
13	12.0	3.7	0.0	chr17	49361350	49361376	(33896065)	+	GA-rich	Low_complexity	1	28	(0)	1629783
12	7.2	2.9	8.3	chr17	49362226	49362260	(33895181)	+	GA-rich	Low_complexity	1	36	(0)	1629784
16	16.4	4.9	0.0	chr17	49362245	49362285	(33895156)	+	(GCGC)n	Simple_repeat	1	43	(0)	1629785
12	28.7	0.0	2.1	chr17	49362266	49362313	(33895128)	+	(CGCCCC)n	Simple_repeat	1	48	(0)	1629786
186	31.6	10.6	0.0	chr17	50478547	50478622	(32778819)	+	L2b	LINE/L2	3290	3374	(1)	1631862
13	22.1	2.3	2.2	chr17	50478731	50478775	(32778666)	+	G-rich	Low_complexity	1	45	(0)	1631863
17	14.0	0.0	0.0	chr17	50479052	50479083	(32778358)	+	(GTGGCC)n	Simple_repeat	1	32	(0)	1631864
20	20.1	1.3	7.5	chr17	50707671	50707749	(32549692)	+	(GCCCC)n	Simple_repeat	1	80	(0)	1632279
193	20.8	3.6	3.6	chr17	50923075	50923129	(32334312)	+	MIRb	SINE/MIR	146	200	(68)	1632739
410	26.1	35.9	3.5	chr17	51152991	51153250	(32104191)	+	L2a	LINE/L2	3069	3416	(10)	1633248
276	25.0	3.5	3.5	chr17	51153888	51153974	(32103467)	+	L2c	LINE/L2	3299	3385	(2)	1633249
522	24.7	12.6	3.5	chr17	51259053	51259224	(31998217)	+	L3	LINE/CR1	3907	4096	(3)	1633452
11115	10.6	0.7	0.7	chr17	52464908	52466487	(30790954)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1635425
2595	8.0	0.3	0.6	chr17	52466490	52466840	(30790601)	+	THE1A	LTR/ERVL-MaLR	3	352	(3)	1635426
206	39.4	7.2	4.2	chr17	52466841	52466981	(30790460)	+	L2c	LINE/L2	3004	3156	(231)	1635424
10791	11.9	0.4	0.2	chr17	53018679	53020254	(30237187)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1636195
2597	8.6	1.4	0.3	chr17	53020255	53020605	(30236836)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1636195
35	7.0	0.0	0.0	chr17	56593365	56593410	(26664031)	+	(CGC)n	Simple_repeat	1	46	(0)	1641535
16	17.0	0.0	0.0	chr17	56593482	56593514	(26663927)	+	(CGC)n	Simple_repeat	1	33	(0)	1641536
18	14.9	0.0	2.6	chr17	56593716	56593754	(26663687)	+	(CGC)n	Simple_repeat	1	39	(0)	1641537
2836	6.5	0.3	1.7	chr17	56757567	56757926	(26499515)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1641913
12068	8.8	0.2	1.1	chr17	56757927	56759482	(26497959)	+	THE1A-int	LTR/ERVL-MaLR	1	1546	(34)	1641913
39	9.5	0.0	0.0	chr17	58756097	58756154	(24501287)	+	(GAACCC)n	Simple_repeat	1	58	(0)	1645698
25	27.6	0.0	0.0	chr17	58756225	58756298	(24501143)	+	GA-rich	Low_complexity	1	74	(0)	1645699
17	29.8	2.5	1.2	chr17	58756310	58756388	(24501053)	+	(GCCGCC)n	Simple_repeat	1	81	(0)	1645700
14	24.1	0.0	0.0	chr17	58756637	58756675	(24500766)	+	(CCCGCC)n	Simple_repeat	1	39	(0)	1645701
14	25.8	0.0	0.0	chr17	59220524	59220561	(24036880)	+	(GCC)n	Simple_repeat	1	38	(0)	1646719
12	26.1	1.9	3.6	chr17	59331480	59331533	(23925908)	+	(GGCG)n	Simple_repeat	1	55	(0)	1647025
13	6.5	8.8	2.7	chr17	59331843	59331876	(23925565)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1647026
13	21.1	2.6	0.0	chr17	59331883	59331921	(23925520)	+	(GCTCCGG)n	Simple_repeat	1	40	(0)	1647027
335	32.5	5.6	6.6	chr17	59619923	59620103	(23637338)	+	L1MDb	LINE/L1	582	760	(5649)	1647644
18	19.3	6.4	0.0	chr17	59964739	59964785	(23292656)	+	(GC)n	Simple_repeat	1	50	(0)	1648327
13	23.1	2.1	2.1	chr17	59964783	59964829	(23292612)	+	(CGCCC)n	Simple_repeat	1	48	(0)	1648328
270	20.8	6.1	0.0	chr17	59965244	59965320	(23292121)	+	L1MC3	LINE/L1	7696	7777	(8)	1648329
14	16.9	2.3	4.4	chr17	60102666	60102709	(23154732)	+	(GGCCGCG)n	Simple_repeat	1	45	(0)	1648573
18	21.5	0.0	7.3	chr17	60102710	60102730	(23154711)	+	(GGC)n	Simple_repeat	4	68	(0)	1648574
2163	12.9	4.1	2.5	chr17	60492907	60493264	(22764177)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1649358
415	16.7	0.0	0.0	chr17	60493265	60493342	(22764099)	+	AluJb	SINE/Alu	235	312	(0)	1649357
36	25.2	6.2	1.7	chr17	62339515	62339644	(20917797)	+	(TA)n	Simple_repeat	2	136	(0)	1652764
2754	7.7	0.8	0.0	chr17	62339645	62339996	(20917445)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1652765
2654	5.8	0.0	0.0	chr17	63500184	63500493	(19756948)	C	AluY	SINE/Alu	(1)	310	1	1654822
299	30.5	8.5	3.2	chr17	63500494	63500583	(19756858)	+	MIRb	SINE/MIR	128	228	(40)	1654821
1910	17.2	0.0	1.6	chr17	64028694	64029006	(19228435)	+	AluJr	SINE/Alu	1	308	(4)	1655789
388	20.9	15.5	1.9	chr17	64029234	64029389	(19228052)	C	L1M5	LINE/L1	(3520)	2626	2446	1655790
27	11.5	5.2	1.6	chr17	64661886	64661943	(18595498)	+	(CGG)n	Simple_repeat	1	61	(0)	1657017
25	22.3	1.6	0.0	chr17	64662112	64662174	(18595267)	+	(GCC)n	Simple_repeat	1	64	(0)	1657018
30	7.0	2.9	7.0	chr17	64662354	64662422	(18595019)	+	G-rich	Low_complexity	1	71	(0)	1657019
20	21.3	1.4	5.5	chr17	65056239	65056311	(18201130)	+	(CCCCGC)n	Simple_repeat	1	70	(0)	1657849
17	30.7	0.0	1.6	chr17	65056597	65056658	(18200783)	+	(GCC)n	Simple_repeat	1	62	(0)	1657850
13	20.4	5.6	3.5	chr17	65056651	65056704	(18200737)	+	(CGG)n	Simple_repeat	1	57	(0)	1657851
21	11.9	12.5	0.0	chr17	65056717	65056809	(18200632)	+	(GCAGG)n	Simple_repeat	1	104	(0)	1657852
2005	12.5	7.6	1.4	chr17	65510069	65510425	(17747016)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1658825
8180	22.7	7.8	8.1	chr17	65510426	65511600	(17745841)	+	L1ME2	LINE/L1	4715	5875	(462)	1658820
17	28.0	1.4	4.0	chr17	67377442	67377515	(15879926)	+	(GGC)n	Simple_repeat	1	75	(0)	1661911
16	21.6	4.1	0.0	chr17	67378916	67378966	(15878475)	+	G-rich	Low_complexity	1	53	(0)	1661914
24	20.3	0.9	9.2	chr17	68205304	68205411	(15052030)	+	(CGCGCCC)n	Simple_repeat	1	109	(0)	1663741
29	5.8	0.0	0.0	chr17	68205729	68205764	(15051677)	+	(GCCCCG)n	Simple_repeat	1	36	(0)	1663742
20	7.0	0.0	0.0	chr17	68205965	68205994	(15051447)	+	(GGC)n	Simple_repeat	1	30	(0)	1663743
1118	26.2	6.9	1.9	chr17	68648460	68648649	(14608792)	+	L1ME3B	LINE/L1	2862	3062	(3084)	1664575
2011	12.8	6.0	1.1	chr17	68648650	68649011	(14608430)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1664576
1118	26.2	6.9	1.9	chr17	68649012	68649287	(14608154)	+	L1ME3B	LINE/L1	3063	3353	(2793)	1664575
1876	16.5	3.6	2.5	chr17	68831148	68831507	(14425934)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1664869
718	30.1	9.2	8.7	chr17	68831508	68831554	(14425887)	+	L2a	LINE/L2	2474	2518	(901)	1664852
219	20.8	7.7	0.0	chr17	68831572	68831619	(14425822)	+	L2a	LINE/L2	2605	2656	(763)	1664852
2098	10.4	6.6	0.8	chr17	69715831	69716189	(13541252)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1666221
2092	13.8	4.7	3.3	chr17	71363182	71363540	(11893901)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1668668
16	9.6	0.0	0.0	chr17	71440411	71440433	(11817008)	+	(TC)n	Simple_repeat	1	23	(0)	1668796
2196	14.2	2.1	1.1	chr17	71629655	71630025	(11627416)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1669085
2845	24.8	8.7	3.0	chr17	71630026	71631307	(11626134)	+	L1ME1	LINE/L1	4990	6328	(24)	1669081
1618	15.6	4.3	3.3	chr17	71784983	71785281	(11472160)	C	THE1B	LTR/ERVL-MaLR	(62)	302	1	1669306
13	20.8	4.3	2.1	chr17	72121831	72121876	(11135565)	+	(CGG)n	Simple_repeat	1	48	(0)	1669836
771	21.5	10.3	3.7	chr17	72439343	72439522	(10817919)	+	MIR	SINE/MIR	21	206	(56)	1670390
2818	6.2	0.8	0.0	chr17	72439523	72439874	(10817567)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1670391
771	21.5	10.3	3.7	chr17	72439875	72439910	(10817531)	+	MIR	SINE/MIR	207	253	(9)	1670390
517	34.6	5.7	0.3	chr17	74042515	74042768	(9214673)	+	MIR	SINE/MIR	2	262	(0)	1673389
389	10.8	8.4	0.0	chr17	75034855	75034919	(8222522)	C	tRNA-Arg-CGA	tRNA	(5)	71	1	1675214
599	4.1	0.0	0.0	chr17	75035113	75035185	(8222256)	+	tRNA-Arg-CGG	tRNA	1	73	(3)	1675215
16	8.3	0.0	0.0	chr17	75182636	75182661	(8074780)	+	(GGGA)n	Simple_repeat	1	26	(0)	1675545
26	25.1	1.4	0.0	chr17	75405587	75405657	(7851784)	+	(CCG)n	Simple_repeat	1	72	(0)	1676044
1048	10.3	7.0	0.0	chr17	75747672	75747817	(7509624)	C	AluSx1	SINE/Alu	(23)	289	133	1676698
16	0.0	4.3	0.0	chr17	75747870	75747892	(7509549)	+	(GTTT)n	Simple_repeat	1	24	(0)	1676699
1945	12.8	1.4	1.7	chr17	75748089	75748384	(7509057)	+	AluJr	SINE/Alu	11	305	(7)	1676700
2568	5.0	0.0	0.0	chr17	75896053	75896353	(7361088)	C	AluY	SINE/Alu	(9)	302	2	1676983
24	20.0	5.3	1.2	chr17	75896642	75896717	(7360724)	+	G-rich	Low_complexity	1	80	(0)	1676984
33	10.4	0.0	0.0	chr17	76072415	76072467	(7184974)	+	(CCG)n	Simple_repeat	1	53	(0)	1677337
2208	26.9	10.8	1.9	chr17	76168029	76168966	(7088475)	C	HAL1	LINE/L1	(0)	2507	1476	1677489
2380	9.1	0.7	0.0	chr17	76450613	76450919	(6806522)	C	AluSp	SINE/Alu	(4)	309	1	1678052
293	24.7	0.6	0.1	chr17	76547631	76548316	(6709125)	+	(AC)n	Simple_repeat	1	690	(0)	1678251
19	20.8	1.5	5.8	chr17	78168588	78168655	(5088786)	+	(GCG)n	Simple_repeat	1	69	(0)	1681320
13	19.8	0.0	6.5	chr17	78168805	78168850	(5088591)	+	(GGCGGC)n	Simple_repeat	1	46	(0)	1681321
23	11.4	3.8	8.5	chr17	78168845	78168923	(5088518)	+	(CCCGCGT)n	Simple_repeat	1	82	(0)	1681322
2231	8.2	2.3	3.9	chr17	78202143	78202447	(5054994)	+	AluSx3	SINE/Alu	1	300	(11)	1681391
452	23.7	17.8	1.5	chr17	78202817	78203017	(5054424)	C	MLT1C	LTR/ERVL-MaLR	(12)	455	215	1681392
14	12.7	0.0	0.0	chr17	78378668	78378693	(4878748)	+	(GGC)n	Simple_repeat	1	26	(0)	1681762
20	12.7	0.0	6.1	chr17	79074731	79074784	(4182657)	+	(CGCCC)n	Simple_repeat	1	50	(0)	1682967
32	30.3	1.9	3.7	chr17	79074947	79075105	(4182336)	+	(GGC)n	Simple_repeat	1	162	(0)	1682968
13	16.3	6.5	6.1	chr17	79075244	79075305	(4182136)	+	(CCTCCGG)n	Simple_repeat	1	66	(0)	1682969
213	32.2	2.5	5.7	chr17	79740559	79740680	(3516761)	C	MIRc	SINE/MIR	(68)	200	83	1683850
642	22.7	0.8	0.0	chr17	79740740	79740871	(3516570)	C	MER63A	DNA/hAT-Blackjack	(48)	162	30	1683851
17	15.9	0.0	0.0	chr17	80220323	80220357	(3037084)	+	(GGCTCG)n	Simple_repeat	1	35	(0)	1684680
16	21.4	0.0	8.6	chr17	80220366	80220435	(3037006)	+	(CCCGC)n	Simple_repeat	1	70	(0)	1684681
14	9.0	5.1	4.9	chr17	80220512	80220550	(3036891)	+	G-rich	Low_complexity	1	41	(0)	1684682
31	20.1	0.0	0.0	chr17	80991986	80992053	(2265388)	+	G-rich	Low_complexity	1	68	(0)	1685754
12	9.6	8.6	2.6	chr17	81397107	81397141	(1860300)	+	(GCGCG)n	Simple_repeat	1	38	(0)	1686228
19	17.2	0.0	0.0	chr17	81397396	81397428	(1860013)	+	A-rich	Low_complexity	1	33	(0)	1686229
13	24.8	4.2	0.0	chr17	81636936	81636983	(1620458)	+	(CTGCCTC)n	Simple_repeat	1	50	(0)	1686548
622	19.4	0.8	3.9	chr17	82135779	82135907	(1121534)	+	FLAM_C	SINE/Alu	2	126	(17)	1687203
1104	30.2	9.0	7.6	chr17	82135908	82136593	(1120848)	+	L1MB5	LINE/L1	5492	6171	(0)	1687202
11	14.8	4.9	4.7	chr17	82273465	82273505	(983936)	+	(CTCCGG)n	Simple_repeat	1	43	(0)	1687397
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
681	32.7	13.4	2.0	chr17	82372659	82373151	(884290)	C	L1M5	LINE/L1	(378)	5784	5245	1687543
1946	15.9	0.0	0.0	chr17	82450000	82450295	(807146)	+	AluJb	SINE/Alu	1	296	(16)	1687653
16	23.6	0.0	0.0	chr17	82450409	82450443	(806998)	+	(CA)n	Simple_repeat	1	35	(0)	1687654
1604	23.8	10.8	1.2	chr17	82450996	82451574	(805867)	+	L1MC5	LINE/L1	8131	8771	(533)	1687655
18	15.1	4.5	0.0	chr17	82519467	82519510	(737931)	+	(GCGCCC)n	Simple_repeat	1	46	(0)	1687801
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
986	8.1	0.0	0.0	chr18	158118	158240	(80215045)	C	AluJb	SINE/Alu	(12)	300	178	1689318
22	24.0	2.6	2.5	chr18	158379	158406	(80214879)	+	(CCCT)n	Simple_repeat	1	77	(0)	1689319
13	19.1	0.0	6.4	chr18	158407	158453	(80214832)	+	(CCCTCCA)n	Simple_repeat	1	47	(0)	1689320
26	27.5	3.3	3.2	chr18	158579	158698	(80214587)	+	(GCC)n	Simple_repeat	1	124	(0)	1689321
16	17.9	2.6	0.0	chr18	2655670	2655708	(77717577)	+	(CCGCCCG)n	Simple_repeat	1	40	(0)	1693038
26	17.4	7.0	4.9	chr18	3013285	3013398	(77359887)	+	(CGCCGCG)n	Simple_repeat	1	122	(0)	1693600
13	22.5	0.0	0.0	chr18	3013368	3013403	(77359882)	+	G-rich	Low_complexity	1	36	(0)	1693601
512	27.3	1.7	1.1	chr18	3329421	3329594	(77043691)	C	MER5B	DNA/hAT-Charlie	(3)	175	1	1694168
296	25.7	18.1	7.1	chr18	3329605	3329901	(77043384)	+	L2c	LINE/L2	3051	3387	(0)	1694169
200	2.8	7.2	2.7	chr18	4510685	4511029	(75862256)	+	(GTG)n	Simple_repeat	1	370	(0)	1696090
17	12.2	4.0	5.8	chr18	5197130	5197179	(75176106)	+	(GGCG)n	Simple_repeat	1	52	(0)	1696918
36	12.7	1.0	8.7	chr18	5895561	5895664	(74477621)	+	(CCCCCGC)n	Simple_repeat	1	95	(0)	1697832
14	10.8	3.1	3.0	chr18	5895687	5895718	(74477567)	+	GA-rich	Low_complexity	1	33	(0)	1697833
14	15.7	0.0	5.1	chr18	5895724	5895762	(74477523)	+	(GGCACGG)n	Simple_repeat	1	39	(0)	1697834
12	13.9	0.0	0.0	chr18	5895958	5895981	(74477304)	+	(TCCC)n	Simple_repeat	1	24	(0)	1697835
1333	26.8	3.1	2.3	chr18	7509751	7510193	(72863092)	+	L2a	LINE/L2	2926	3372	(54)	1700215
945	32.2	9.9	1.7	chr18	7510192	7510767	(72862518)	C	L2	LINE/L2	(2099)	1320	693	1700217
22	25.9	0.9	6.6	chr18	8705449	8705553	(71667732)	+	G-rich	Low_complexity	1	106	(0)	1701817
28	0.0	0.0	0.0	chr18	8705586	8705611	(71667674)	+	(CGC)n	Simple_repeat	1	26	(0)	1701818
17	11.1	0.0	0.0	chr18	8705723	8705751	(71667534)	+	(CCA)n	Simple_repeat	1	29	(0)	1701819
15	20.9	1.6	6.3	chr18	9914178	9914239	(70459046)	+	(GCCGCC)n	Simple_repeat	1	63	(0)	1703864
5947	11.7	3.2	0.7	chr18	11299248	11300559	(69072726)	C	L1MA2	LINE/L1	(0)	6304	4958	1705686
1608	16.1	2.5	0.9	chr18	11300568	11300886	(69072399)	+	THE1C	LTR/ERVL-MaLR	52	375	(0)	1705687
15	3.4	10.0	0.0	chr18	11300897	11300926	(69072359)	+	(TTCA)n	Simple_repeat	1	33	(0)	1705688
21	22.1	5.8	4.6	chr18	12076520	12076622	(68296663)	+	(GCA)n	Simple_repeat	1	109	(0)	1706882
20	24.7	2.2	5.4	chr18	12076600	12076689	(68296596)	+	(GCG)n	Simple_repeat	1	92	(0)	1706883
16	0.0	0.0	0.0	chr18	12076854	12076870	(68296415)	+	(T)n	Simple_repeat	1	17	(0)	1706884
14	21.2	4.6	4.4	chr18	12076881	12076945	(68296340)	+	GA-rich	Low_complexity	1	68	(0)	1706885
13	28.8	0.0	4.7	chr18	12377343	12377406	(67995879)	+	G-rich	Low_complexity	1	64	(0)	1707303
2758	8.2	0.0	0.6	chr18	13035270	13035626	(67337659)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1708573
11841	9.3	1.8	0.0	chr18	13282223	13283773	(67089512)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1708900
2479	8.5	3.7	0.0	chr18	13283774	13284115	(67089170)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1708900
15	21.2	0.0	4.3	chr18	21111889	21111935	(59261350)	+	G-rich	Low_complexity	1	47	(0)	1711924
13	22.5	3.1	6.1	chr18	21741298	21741361	(58631924)	+	(CCG)n	Simple_repeat	1	66	(0)	1713218
2498	11.6	2.2	0.0	chr18	23044039	23044392	(57328893)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	1715467
3061	12.9	0.0	5.8	chr18	23044393	23044542	(57328743)	+	L1MB3	LINE/L1	6000	6141	(42)	1715465
1885	16.2	0.7	0.7	chr18	23044543	23044838	(57328447)	+	AluJb	SINE/Alu	1	296	(16)	1715468
2428	21.6	2.5	1.6	chr18	23061664	23062016	(57311269)	C	L1MB5	LINE/L1	(8)	6166	5806	1715507
2398	9.9	2.8	0.3	chr18	23062017	23062362	(57310923)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1715508
2428	21.6	2.5	1.6	chr18	23062363	23062386	(57310899)	C	L1MB5	LINE/L1	(369)	5805	5783	1715507
15	29.2	2.7	2.6	chr18	23135480	23135553	(57237732)	+	(AGCC)n	Simple_repeat	1	76	(0)	1715683
40	27.5	1.4	2.8	chr18	23135766	23135908	(57237377)	+	(GCC)n	Simple_repeat	1	145	(0)	1715684
13	9.7	0.0	0.0	chr18	23453296	23453317	(56919968)	+	(CGC)n	Simple_repeat	1	22	(0)	1716229
2365	9.4	0.0	0.0	chr18	23592758	23593056	(56780229)	+	AluSz	SINE/Alu	2	300	(12)	1716490
2217	16.8	9.7	2.0	chr18	23593057	23593334	(56779951)	C	MLT1F	LTR/ERVL-MaLR	(247)	301	1	1716489
1533	22.4	8.8	7.5	chr18	23593335	23593748	(56779537)	C	L1ME3	LINE/L1	(81)	6081	5648	1716487
15	20.0	3.6	3.5	chr18	24014646	24014700	(56358585)	+	(CCGCGG)n	Simple_repeat	1	57	(0)	1717217
26	0.0	0.0	0.0	chr18	24014742	24014766	(56358519)	+	(CTCCC)n	Simple_repeat	1	25	(0)	1717218
24	20.8	3.3	0.0	chr18	24014886	24014946	(56358339)	+	(GCG)n	Simple_repeat	1	63	(0)	1717219
13	4.7	4.5	0.0	chr18	24271698	24271719	(56101566)	+	(CCT)n	Simple_repeat	1	23	(0)	1717613
26	6.3	0.0	0.0	chr18	24272237	24272270	(56101015)	+	(T)n	Simple_repeat	1	34	(0)	1717614
1403	12.8	22.9	0.0	chr18	24457619	24457907	(55915378)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1717988
376	26.9	5.4	2.7	chr18	24540456	24540659	(55832626)	+	MIRb	SINE/MIR	16	221	(41)	1718133
38	14.8	8.8	3.4	chr18	25351013	25351148	(55022137)	+	(CGCGCTC)n	Simple_repeat	1	148	(0)	1719212
19	10.4	0.0	0.0	chr18	25351150	25351180	(55022105)	+	(CGG)n	Simple_repeat	1	31	(0)	1719213
25	28.2	0.0	0.0	chr18	25351221	25351283	(55022002)	+	GA-rich	Low_complexity	1	63	(0)	1719214
37	25.6	0.9	1.8	chr18	25351813	25351922	(55021363)	+	(GGC)n	Simple_repeat	1	111	(0)	1719215
27	10.9	2.0	1.9	chr18	25351924	25351974	(55021311)	+	(GAG)n	Simple_repeat	1	52	(0)	1719216
59	13.5	5.7	4.2	chr18	25352287	25352445	(55020840)	+	(GCC)n	Simple_repeat	1	168	(0)	1719217
30	10.3	0.0	0.0	chr18	25352596	25352638	(55020647)	+	(A)n	Simple_repeat	1	43	(0)	1719218
491	22.4	11.2	2.0	chr18	26089740	26089885	(54283400)	+	L2c	LINE/L2	3227	3387	(0)	1720303
12	15.2	2.4	7.0	chr18	26090392	26090433	(54282852)	+	(GGCCC)n	Simple_repeat	1	43	(0)	1720304
11	21.1	2.5	2.4	chr18	26656450	26656489	(53716796)	+	G-rich	Low_complexity	1	41	(0)	1721302
12	17.0	7.5	0.0	chr18	26656783	26656822	(53716463)	+	G-rich	Low_complexity	1	43	(0)	1721303
2709	7.6	0.3	0.0	chr18	27905153	27905494	(52467791)	C	THE1A	LTR/ERVL-MaLR	(12)	343	1	1723052
11648	9.6	0.4	0.2	chr18	27905495	27907070	(52466215)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1723052
2585	6.6	1.8	0.0	chr18	27907071	27907402	(52465883)	C	THE1A	LTR/ERVL-MaLR	(0)	355	18	1723052
621	23.3	3.4	0.0	chr18	27907417	27907588	(52465697)	C	L1MB8	LINE/L1	(289)	5889	5712	1723046
341	33.1	6.2	3.5	chr18	28026816	28026987	(52346298)	+	MLT1I	LTR/ERVL-MaLR	5	181	(230)	1723218
15	9.7	6.1	0.0	chr18	28175585	28175617	(52197668)	+	(CCAGCC)n	Simple_repeat	1	35	(0)	1723414
24	22.9	2.7	1.3	chr18	28176821	28176893	(52196392)	+	(GCGGC)n	Simple_repeat	1	75	(0)	1723415
15	17.1	2.4	2.4	chr18	28176906	28176946	(52196339)	+	(CCCCG)n	Simple_repeat	1	42	(0)	1723416
15	14.7	6.2	2.0	chr18	28177023	28177057	(52196228)	+	GA-rich	Low_complexity	1	37	(0)	1723417
28	0.0	0.0	0.0	chr18	28177058	28177083	(52196202)	+	(GGC)n	Simple_repeat	1	26	(0)	1723418
15	14.7	6.2	2.0	chr18	28177084	28177095	(52196190)	+	GA-rich	Low_complexity	38	49	(0)	1723419
12	30.1	0.0	3.5	chr18	28177146	28177202	(52196083)	+	(CCCCGCT)n	Simple_repeat	1	57	(0)	1723420
2519	10.2	0.8	0.0	chr18	28426523	28426874	(51946411)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1723706
13758	15.9	2.4	1.5	chr18	28426875	28429648	(51943637)	C	L1MD2	LINE/L1	(2592)	3891	1078	1723703
1839	24.3	6.5	6.1	chr18	29127294	29127757	(51245528)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	99	1724652
1924	12.3	6.3	1.1	chr18	29127758	29128118	(51245167)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1724653
1839	24.3	6.5	6.1	chr18	29128119	29128209	(51245076)	C	MLT1F2	LTR/ERVL-MaLR	(462)	98	1	1724652
2094	13.8	2.3	0.9	chr18	29950755	29951104	(50422181)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1725675
13	22.6	0.0	4.4	chr18	31042994	31043038	(49330247)	+	(CCCCG)n	Simple_repeat	1	45	(0)	1727133
2317	10.0	3.0	3.3	chr18	31489707	31490069	(48883216)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	1727739
26	24.3	0.7	8.7	chr18	31498127	31498195	(48875090)	+	G-rich	Low_complexity	1	105	(33)	1727744
17	9.6	8.3	3.9	chr18	31498196	31498243	(48875042)	+	(CGG)n	Simple_repeat	1	52	(0)	1727745
26	24.3	0.7	8.7	chr18	31498244	31498263	(48875022)	+	G-rich	Low_complexity	106	138	(0)	1727744
16	28.8	2.5	2.5	chr18	31684626	31684704	(48688581)	+	G-rich	Low_complexity	1	81	(0)	1728040
18	24.3	6.3	1.2	chr18	31685553	31685631	(48687654)	+	(CCG)n	Simple_repeat	1	84	(0)	1728041
1087	6.7	0.0	4.0	chr18	32017986	32018135	(48355150)	C	AluSz	SINE/Alu	(167)	145	2	1728648
5453	8.0	0.4	0.0	chr18	32252574	32253283	(48120002)	C	THE1A-int	LTR/ERVL-MaLR	(867)	713	1	1729110
1320	8.7	0.6	0.0	chr18	32253284	32253455	(48119830)	C	THE1A	LTR/ERVL-MaLR	(0)	355	183	1729110
1152	14.6	0.6	0.0	chr18	32253457	32253621	(48119664)	C	AluSq10	SINE/Alu	(147)	166	1	1729111
18	25.0	0.0	3.3	chr18	32470449	32470508	(47902777)	+	(CCG)n	Simple_repeat	1	60	(0)	1729399
17	15.5	2.8	0.0	chr18	32470786	32470821	(47902464)	+	(CCT)n	Simple_repeat	1	37	(0)	1729400
22	20.9	1.8	0.0	chr18	32470926	32470980	(47902305)	+	(CCGCCT)n	Simple_repeat	1	56	(0)	1729401
2523	9.6	0.3	1.7	chr18	33339564	33339923	(47033362)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1730595
11420	9.7	0.9	0.0	chr18	33339924	33341480	(47031805)	+	THE1A-int	LTR/ERVL-MaLR	1	1572	(8)	1730595
2431	12.1	0.0	1.4	chr18	33341486	33341845	(47031440)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1730595
17	22.0	2.0	2.0	chr18	33440758	33440807	(46932478)	+	(GCG)n	Simple_repeat	1	51	(0)	1730735
11671	9.7	0.2	0.7	chr18	34265573	34267160	(46106125)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1731709
2005	13.7	3.4	2.8	chr18	34267161	34267513	(46105772)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1731709
876	27.1	5.4	6.1	chr18	34267514	34267549	(46105736)	+	MLT2D	LTR/ERVL	382	410	(54)	1731708
25	8.6	0.0	2.6	chr18	34493213	34493251	(45880034)	+	(TG)n	Simple_repeat	1	39	(0)	1732026
13	15.8	2.7	2.6	chr18	34493261	34493297	(45879988)	+	GA-rich	Low_complexity	1	38	(0)	1732027
16	11.7	0.0	0.0	chr18	35054682	35054710	(45318575)	+	(GTTT)n	Simple_repeat	1	29	(0)	1732793
2803	11.2	0.3	0.3	chr18	35228654	35229028	(45144257)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1733017
330	30.7	7.1	5.7	chr18	35229056	35229196	(45144089)	+	L2a	LINE/L2	3161	3350	(76)	1733018
2328	4.3	1.5	0.0	chr18	35240456	35240713	(45132572)	C	AluY	SINE/Alu	(8)	303	42	1733038
3016	19.2	6.5	1.2	chr18	35971355	35972182	(44401103)	+	L1MB5	LINE/L1	5258	6174	(0)	1734073
13	8.6	0.0	6.9	chr18	35972700	35972728	(44400557)	+	(GCG)n	Simple_repeat	1	29	(0)	1734074
11431	10.0	0.6	0.2	chr18	39227271	39228844	(41144441)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1738426
2677	8.5	0.6	0.0	chr18	39228845	39229197	(41144088)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1738426
4719	15.2	5.5	4.5	chr18	42115298	42115418	(38257867)	C	L1MC2	LINE/L1	(11)	6333	6197	1742375
2347	13.6	0.8	0.3	chr18	42115419	42115780	(38257505)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1742376
11269	10.4	0.4	0.1	chr18	42766099	42767673	(37605612)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1743270
2598	11.0	0.3	0.0	chr18	42767674	42768027	(37605258)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1743270
39	24.4	2.8	3.4	chr18	42768028	42768097	(37605188)	+	(TA)n	Simple_repeat	1	69	(0)	1743271
2660	9.3	0.0	0.0	chr18	43133552	43133906	(37239379)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1743806
2558	9.6	0.3	3.5	chr18	45950255	45950621	(34422664)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1747683
737	14.0	10.6	1.0	chr18	45950622	45950795	(34422490)	C	Tigger4b	DNA/TcMar-Tigger	(101)	260	1	1747682
2441	10.2	0.8	0.8	chr18	45989192	45989546	(34383739)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1747759
14	15.1	0.0	10.9	chr18	46917271	46917325	(33455960)	+	(CCTCC)n	Simple_repeat	1	55	(0)	1749455
437	11.9	0.0	0.0	chr18	47175826	47175884	(33197401)	+	AluYk2	SINE/Alu	233	291	(20)	1749802
548	25.9	4.5	2.5	chr18	47176501	47176574	(33196711)	+	Charlie5	DNA/hAT-Charlie	2378	2451	(173)	1749803
2648	8.8	0.6	0.0	chr18	47181213	47181565	(33191720)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1749817
11984	9.2	0.2	0.0	chr18	47181566	47183141	(33190144)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1749817
2237	12.7	0.3	7.9	chr18	48568578	48568971	(31804314)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1752126
16	0.0	0.0	0.0	chr18	48951331	48951347	(31421938)	+	(A)n	Simple_repeat	1	17	(0)	1752712
19	18.3	4.5	4.3	chr18	48951510	48951576	(31421709)	+	(GCG)n	Simple_repeat	1	70	(0)	1752713
31	10.5	0.0	0.0	chr18	51197217	51197267	(29176018)	+	(GGC)n	Simple_repeat	1	51	(0)	1756517
20	26.7	3.8	3.7	chr18	51197273	51197378	(29175907)	+	(GGCCGC)n	Simple_repeat	1	106	(0)	1756518
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
17	8.7	8.1	0.0	chr18	55588240	55588276	(24785009)	+	G-rich	Low_complexity	1	40	(0)	1762869
14	12.0	0.0	3.5	chr18	58044202	58044230	(22329055)	+	GA-rich	Low_complexity	1	29	(0)	1766703
2682	9.7	1.1	0.8	chr18	62005212	62005565	(18367720)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1772789
280	4.3	4.1	0.0	chr18	62005566	62005612	(18367673)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1532	1772789
13	24.3	0.0	8.1	chr18	62715590	62715651	(17657634)	+	(CCG)n	Simple_repeat	1	62	(0)	1773932
51	28.8	3.0	3.0	chr18	62715748	62715977	(17657308)	+	(CGG)n	Simple_repeat	1	237	(0)	1773933
2230	14.2	3.6	1.7	chr18	64280335	64280691	(16092594)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1776265
8031	13.3	14.4	2.5	chr18	64280694	64282123	(16091162)	+	THE1B-int	LTR/ERVL-MaLR	3	1631	(0)	1776265
2243	12.2	3.3	0.8	chr18	64348556	64348910	(16024375)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1776355
2106	11.2	4.7	3.6	chr18	64497524	64497883	(15875402)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1776555
2012	14.8	4.5	1.6	chr18	65532350	65532719	(14840566)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1777894
1722	14.1	8.2	1.2	chr18	66643621	66643950	(13729335)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1779405
2000	13.4	1.4	1.1	chr18	68073815	68074168	(12299117)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1781295
20	14.9	0.0	6.0	chr18	70288985	70289034	(10084251)	+	GA-rich	Low_complexity	1	50	(0)	1784348
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
16	21.7	7.7	2.4	chr18	79393786	79393863	(979422)	+	G-rich	Low_complexity	1	84	(0)	1795467
23	22.1	0.0	0.0	chr18	79394058	79394110	(979175)	+	GA-rich	Low_complexity	1	53	(0)	1795468
1940	13.3	5.2	1.6	chr18	79664101	79664467	(708818)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1795661
325	15.8	0.0	0.0	chr18	79664469	79664525	(708760)	C	MSTA	LTR/ERVL-MaLR	(371)	57	1	1795662
12	16.3	7.0	2.2	chr18	79988584	79988626	(384659)	+	(CGTG)n	Simple_repeat	1	46	(0)	1795993
2378	12.2	0.6	1.9	chr18	80013806	80014165	(359120)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1796040
184	26.7	0.0	0.0	chr19	412762	412806	(58204810)	C	MIR1_Amn	SINE/MIR	(73)	157	113	1796878
2052	6.8	3.9	8.4	chr19	860182	860503	(57757113)	C	AluSx1	SINE/Alu	(3)	309	3	1797778
12	21.8	0.0	4.9	chr19	861047	861087	(57756529)	+	(CCCCA)n	Simple_repeat	1	41	(0)	1797779
14	8.5	0.0	3.7	chr19	1095317	1095343	(57522273)	+	(GCC)n	Simple_repeat	1	27	(0)	1798212
1404	12.8	0.5	5.3	chr19	1141697	1141922	(57475694)	C	AluJo	SINE/Alu	(97)	215	1	1798281
11	18.4	2.4	4.8	chr19	1508287	1508327	(57109289)	+	G-rich	Low_complexity	1	42	(0)	1798898
239	29.6	9.1	0.6	chr19	1508661	1508757	(57108859)	C	MIR3	SINE/MIR	(85)	123	28	1798899
2389	8.6	1.0	0.3	chr19	2023896	2024199	(56593417)	+	AluY	SINE/Alu	1	306	(5)	1799977
1849	12.2	0.7	5.2	chr19	2024200	2024380	(56593236)	+	AluSz	SINE/Alu	137	311	(1)	1799976
405	15.3	2.2	0.0	chr19	2024472	2024554	(56593062)	+	MLT1H1	LTR/ERVL-MaLR	412	501	(54)	1799973
1095	18.7	0.5	0.0	chr19	2024555	2024763	(56592853)	+	LTR26D	LTR/ERV1	1	210	(394)	1799978
19	16.2	4.0	1.9	chr19	2050909	2050958	(56566658)	+	G-rich	Low_complexity	1	52	(0)	1800035
11	22.4	6.6	3.1	chr19	2050970	2051030	(56566586)	+	(GGAGCGC)n	Simple_repeat	1	65	(0)	1800036
2244	9.4	3.6	0.7	chr19	2737408	2737706	(55879910)	C	AluSx3	SINE/Alu	(3)	308	1	1801554
8469	4.5	0.9	0.3	chr19	2871676	2872676	(55744940)	C	LTR13	LTR/ERVK	(0)	1007	1	1801822
24	16.1	6.5	0.0	chr19	3185963	3186024	(55431592)	+	(CCG)n	Simple_repeat	1	66	(0)	1802594
13	19.1	2.6	2.6	chr19	3186112	3186149	(55431467)	+	(GCT)n	Simple_repeat	1	39	(0)	1802595
15	8.1	0.0	3.6	chr19	3186131	3186158	(55431458)	+	(CGC)n	Simple_repeat	1	28	(0)	1802596
588	30.5	11.0	3.5	chr19	3625997	3626494	(54991122)	+	L2b	LINE/L2	2577	3156	(219)	1803672
2555	4.4	0.0	0.0	chr19	3913955	3914250	(54703366)	+	AluY	SINE/Alu	1	296	(15)	1804326
1974	15.7	2.8	3.4	chr19	3914251	3914524	(54703092)	C	THE1B	LTR/ERVL-MaLR	(67)	297	20	1804325
267	17.4	0.0	0.0	chr19	3914525	3914560	(54703056)	+	Alu	SINE/Alu	1	36	(97)	1804327
11	14.0	0.0	8.1	chr19	4267532	4267568	(54350048)	+	G-rich	Low_complexity	1	37	(0)	1805214
2050	8.4	3.5	0.4	chr19	4267937	4268244	(54349372)	C	AluSp	SINE/Alu	(0)	313	1	1805215
421	24.5	2.8	2.8	chr19	4670677	4670819	(53946797)	+	L1MC4a	LINE/L1	7108	7250	(632)	1806159
2105	10.3	0.0	0.0	chr19	4670824	4671095	(53946521)	C	AluSq	SINE/Alu	(38)	275	4	1806160
13	20.1	0.0	7.5	chr19	6110309	6110361	(52507255)	+	(CCCGCCC)n	Simple_repeat	1	53	(0)	1809424
15	21.8	0.0	0.0	chr19	6110416	6110452	(52507164)	+	(GGC)n	Simple_repeat	1	37	(0)	1809425
18	7.8	0.0	0.0	chr19	6110501	6110527	(52507089)	+	(GGC)n	Simple_repeat	1	27	(0)	1809425
15	9.7	2.7	5.3	chr19	6110541	6110577	(52507039)	+	(CCCG)n	Simple_repeat	1	38	(0)	1809426
12	16.6	0.0	0.0	chr19	6161441	6161467	(52456149)	+	A-rich	Low_complexity	1	27	(0)	1809585
2622	5.4	0.0	1.0	chr19	8042603	8042915	(50574701)	+	AluY	SINE/Alu	1	310	(1)	1814253
2305	9.5	0.0	2.2	chr19	8043193	8043507	(50574109)	C	AluSx1	SINE/Alu	(0)	312	5	1814254
227	27.3	4.9	8.3	chr19	9584766	9584849	(49032767)	C	SVA_F	Retroposon/SVA	(910)	465	385	1817699
620	19.5	0.4	0.1	chr19	9584795	9584916	(49032700)	+	FLAM_C	SINE/Alu	5	129	(173)	1817700
17	12.7	0.0	5.3	chr19	9914851	9914888	(48702728)	+	(CCG)n	Simple_repeat	1	38	(0)	1818429
263	22.6	9.3	3.0	chr19	9914968	9915135	(48702481)	+	MIR1_Amn	SINE/MIR	14	196	(34)	1818430
243	19.5	25.2	1.3	chr19	9915146	9915223	(48702393)	C	L2a	LINE/L2	(19)	3407	3305	1818431
6457	11.0	2.1	2.5	chr19	11631980	11632417	(46985199)	+	L1MA3	LINE/L1	5781	6222	(83)	1822830
2723	9.0	0.3	0.0	chr19	11632418	11632771	(46984845)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1822832
12006	8.4	0.8	0.6	chr19	11632772	11634349	(46983267)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1822832
2326	8.4	5.6	7.2	chr19	11634350	11634646	(46982970)	+	THE1A	LTR/ERVL-MaLR	1	294	(61)	1822832
2005	12.2	10.0	0.9	chr19	11770074	11770419	(46847197)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1823102
2193	8.4	2.0	1.7	chr19	12441380	12441676	(46175940)	C	AluSg	SINE/Alu	(11)	299	2	1824455
16	29.8	1.6	0.0	chr19	12806495	12806555	(45811061)	+	(GCAGCG)n	Simple_repeat	1	62	(0)	1825249
37	25.8	2.8	5.5	chr19	12838391	12838437	(45779179)	+	(CGC)n	Simple_repeat	1	56	(127)	1825335
15	11.6	0.0	0.0	chr19	12838438	12838465	(45779151)	+	(CCCTC)n	Simple_repeat	1	28	(0)	1825336
37	25.8	2.8	5.5	chr19	12838466	12838568	(45779048)	+	(CGC)n	Simple_repeat	57	183	(0)	1825335
20	25.1	4.0	2.6	chr19	12995102	12995175	(45622441)	+	(TG)n	Simple_repeat	1	77	(0)	1825727
23	19.2	0.0	3.4	chr19	12995313	12995320	(45622296)	+	(GCGTGT)n	Simple_repeat	1	57	(0)	1825728
29	16.2	0.0	0.0	chr19	12995321	12995369	(45622247)	+	(GT)n	Simple_repeat	1	49	(0)	1825729
29	17.1	1.4	2.9	chr19	12995372	12995440	(45622176)	+	(CCGC)n	Simple_repeat	1	70	(0)	1825730
80	16.2	3.3	6.0	chr19	12995498	12995737	(45621879)	+	(GCG)n	Simple_repeat	1	248	(0)	1825731
1750	17.4	2.7	0.7	chr19	13688838	13689125	(44928491)	C	AluJo	SINE/Alu	(18)	294	1	1827499
225	32.9	0.0	0.0	chr19	13689150	13689234	(44928382)	+	MamRep137	DNA/TcMar-Tigger	426	510	(0)	1827500
743	23.2	21.4	2.0	chr19	13689274	13689576	(44928040)	+	MLT1J1	LTR/ERVL-MaLR	66	443	(1)	1827501
13	23.6	4.8	3.0	chr19	13795528	13795590	(44822026)	+	(GCGGA)n	Simple_repeat	1	66	(0)	1827824
13	15.4	0.0	3.2	chr19	13795618	13795648	(44821968)	+	(CCCGG)n	Simple_repeat	1	31	(0)	1827825
19	19.1	3.8	6.0	chr19	13795670	13795749	(44821867)	+	G-rich	Low_complexity	1	83	(0)	1827826
16	18.9	0.0	0.0	chr19	14073360	14073395	(44544221)	+	(GAGCCG)n	Simple_repeat	1	36	(0)	1828504
15	8.7	0.0	10.9	chr19	14073548	14073593	(44544023)	+	(CGCGCCC)n	Simple_repeat	1	46	(0)	1828505
13	18.5	4.3	4.1	chr19	14073621	14073667	(44543949)	+	(GGC)n	Simple_repeat	1	49	(0)	1828506
14	19.0	3.3	6.3	chr19	14073772	14073832	(44543784)	+	(GAGCGC)n	Simple_repeat	1	63	(0)	1828507
535	28.4	3.5	4.0	chr19	14089470	14089704	(44527912)	C	MIR	SINE/MIR	(0)	262	35	1828545
37	20.9	2.9	1.9	chr19	14090034	14090136	(44527480)	+	(CGG)n	Simple_repeat	1	106	(0)	1828546
13	20.4	3.6	5.2	chr19	14248487	14248542	(44369074)	+	(GCCCCCA)n	Simple_repeat	1	58	(0)	1828948
36	25.6	2.7	3.9	chr19	14248619	14248767	(44368849)	+	(CCCT)n	Simple_repeat	1	153	(0)	1828949
2474	9.9	0.6	1.1	chr19	14640653	14641009	(43976607)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1830025
1525	19.5	7.6	8.4	chr19	14641010	14641319	(43976297)	+	MER34B	LTR/ERV1	246	565	(0)	1830023
28	23.7	4.8	5.2	chr19	14690058	14690206	(43927410)	+	(GCGCG)n	Simple_repeat	1	148	(0)	1830169
2777	9.1	3.0	0.3	chr19	14902155	14902508	(43715108)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1830585
2842	17.1	1.7	6.0	chr19	15136625	15137252	(43480364)	C	L1MB3	LINE/L1	(2)	6181	5582	1831199
1205	11.1	1.1	0.6	chr19	15137253	15137434	(43480182)	C	THE1A	LTR/ERVL-MaLR	(0)	355	173	1831200
1294	13.0	1.5	0.0	chr19	15137435	15137626	(43479990)	+	AluSx	SINE/Alu	100	294	(18)	1831201
18	0.0	0.0	0.0	chr19	15331873	15331895	(43285721)	+	(TCC)n	Simple_repeat	1	23	(0)	1831589
32	0.0	0.0	0.0	chr19	15332502	15332531	(43285085)	+	(GCC)n	Simple_repeat	1	30	(0)	1831590
22	18.4	7.0	2.6	chr19	15332548	15332618	(43284998)	+	(CG)n	Simple_repeat	1	76	(0)	1831591
219	29.2	5.9	5.0	chr19	16197566	16197666	(42419950)	+	L2b	LINE/L2	3221	3322	(53)	1833390
12	24.3	0.0	4.3	chr19	16197976	16198022	(42419594)	+	(CGCTGC)n	Simple_repeat	1	47	(0)	1833391
1894	17.2	0.0	0.3	chr19	16612278	16612585	(42005031)	C	AluJr	SINE/Alu	(5)	307	1	1834275
2160	9.8	1.0	3.6	chr19	16886714	16887019	(41730597)	C	AluSp	SINE/Alu	(14)	299	2	1835015
2049	14.2	0.3	2.2	chr19	17014041	17014358	(41603258)	C	AluJo	SINE/Alu	(0)	312	1	1835303
2405	12.2	3.3	2.8	chr19	17014463	17014824	(41602792)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1835304
13	24.4	2.2	2.1	chr19	17235853	17235898	(41381718)	+	(CCG)n	Simple_repeat	1	47	(0)	1835810
37	30.3	4.2	2.0	chr19	17236074	17236266	(41381350)	+	GA-rich	Low_complexity	1	201	(0)	1835811
24	28.9	0.0	0.0	chr19	17309575	17309645	(41307971)	+	(GGC)n	Simple_repeat	1	71	(0)	1835999
12	20.5	2.0	5.9	chr19	17334383	17334432	(41283184)	+	(CCCCAG)n	Simple_repeat	1	51	(0)	1836049
193	10.3	0.0	0.0	chr19	17335054	17335082	(41282534)	+	MIRc	SINE/MIR	115	143	(125)	1836050
15	29.0	0.0	0.0	chr19	17390557	17390606	(41227010)	+	(GGAGCG)n	Simple_repeat	1	50	(0)	1836209
2174	12.7	0.3	1.3	chr19	17899181	17899494	(40718122)	C	AluSx1	SINE/Alu	(1)	311	1	1837572
2298	10.0	1.7	8.9	chr19	17899495	17899693	(40717923)	+	THE1A	LTR/ERVL-MaLR	164	355	(0)	1837571
12439	8.5	0.3	0.1	chr19	17899694	17901270	(40716346)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1837571
2442	11.2	1.7	0.6	chr19	17901271	17901621	(40715995)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1837571
878	15.7	4.5	3.2	chr19	17901622	17901797	(40715819)	C	L1ME1	LINE/L1	(1185)	4961	4782	1837561
17	29.3	1.7	0.0	chr19	18173834	18173892	(40443724)	+	(CTG)n	Simple_repeat	1	60	(0)	1838274
829	14.1	16.3	3.1	chr19	18401738	18401928	(40215688)	C	MLT1A0	LTR/ERVL-MaLR	(7)	358	138	1838826
20	24.7	1.8	0.0	chr19	18419440	18419496	(40198120)	+	(GCC)n	Simple_repeat	1	58	(0)	1838870
13	19.8	0.0	2.7	chr19	18419535	18419571	(40198045)	+	G-rich	Low_complexity	1	37	(0)	1838871
13	23.9	1.6	6.5	chr19	18419579	18419639	(40197977)	+	(GGC)n	Simple_repeat	1	62	(0)	1838872
12	20.2	4.1	3.9	chr19	18831910	18831958	(39785658)	+	(CGACGG)n	Simple_repeat	1	51	(0)	1839690
25	26.8	2.9	2.8	chr19	18831937	18832039	(39785577)	+	(CGG)n	Simple_repeat	1	106	(0)	1839691
16	22.7	3.0	4.3	chr19	18832095	18832161	(39785455)	+	(CCGCGG)n	Simple_repeat	1	69	(0)	1839692
184	32.9	1.4	1.4	chr19	19516521	19516591	(39101025)	C	MIR	SINE/MIR	(79)	183	113	1841109
1356	20.8	0.3	6.0	chr19	19520909	19521261	(39096355)	C	L1MB8	LINE/L1	(421)	5763	5431	1841121
266	15.6	5.9	1.5	chr19	19521320	19521384	(39096232)	C	L1MB8	LINE/L1	(755)	5429	5362	1841121
787	16.0	1.6	0.0	chr19	19521385	19521509	(39096107)	C	FLAM_C	SINE/Alu	(8)	135	9	1841123
3061	18.8	5.7	4.5	chr19	19521510	19521590	(39096026)	C	L1MB8	LINE/L1	(756)	5390	5319	1841121
815	19.1	2.0	0.7	chr19	22893651	22893797	(35723819)	C	FRAM	SINE/Alu	(0)	176	28	1845896
1896	16.4	8.0	1.2	chr19	24119985	24120323	(34497293)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1847629
248	30.8	2.2	14.5	chr19	29967718	29967869	(28649747)	+	MIRc	SINE/MIR	2	134	(134)	1851242
891	29.2	10.5	5.3	chr19	30040859	30040903	(28576713)	C	L1MEf	LINE/L1	(6587)	1376	1325	1851313
2243	9.8	2.3	3.3	chr19	30040904	30041134	(28576482)	+	THE1A	LTR/ERVL-MaLR	1	235	(120)	1851319
2215	11.1	0.0	2.0	chr19	30041135	30041431	(28576185)	+	AluSg	SINE/Alu	1	291	(19)	1851320
2180	14.0	3.6	0.0	chr19	32495537	32495887	(26121729)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1854890
2322	12.8	4.9	4.9	chr19	32495888	32496018	(26121598)	+	L1MA3	LINE/L1	6173	6305	(0)	1854889
13	14.1	3.0	2.9	chr19	32692046	32692078	(25925538)	+	(CCG)n	Simple_repeat	1	34	(0)	1855320
12	13.4	4.2	8.0	chr19	32692415	32692462	(25925154)	+	(CCTGG)n	Simple_repeat	1	50	(0)	1855321
1500	23.3	0.2	3.8	chr19	32962006	32962087	(25655529)	+	L1MEc	LINE/L1	5071	5145	(1174)	1855818
1777	13.6	9.4	3.4	chr19	32962088	32962444	(25655172)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1855822
1500	23.3	0.2	3.8	chr19	32962445	32962780	(25654836)	+	L1MEc	LINE/L1	5146	5474	(845)	1855818
411	23.5	0.0	8.5	chr19	33373111	33373240	(25244376)	+	SVA_E	Retroposon/SVA	194	312	(1070)	1856705
767	12.5	0.0	0.9	chr19	33373142	33373253	(25244363)	C	AluJo	SINE/Alu	(196)	116	6	1856706
13	7.7	0.0	9.1	chr19	33521826	33521858	(25095758)	+	G-rich	Low_complexity	1	33	(0)	1856870
2292	14.4	3.0	1.7	chr19	33537571	33537929	(25079687)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1856902
300	31.2	12.4	1.2	chr19	33537973	33538215	(25079401)	+	L2a	LINE/L2	2484	2757	(662)	1856903
15	19.9	0.0	4.5	chr19	33622004	33622047	(24995569)	+	GA-rich	Low_complexity	1	44	(0)	1857060
12	25.0	0.0	6.8	chr19	33622077	33622135	(24995481)	+	(CCGCCCC)n	Simple_repeat	1	59	(0)	1857061
25	26.9	3.8	1.8	chr19	33795641	33795746	(24821870)	+	GA-rich	Low_complexity	1	110	(0)	1857330
17	20.2	6.9	2.6	chr19	33796244	33796315	(24821301)	+	(GGCGCCG)n	Simple_repeat	1	77	(0)	1857331
31	20.7	5.2	5.0	chr19	33796639	33796772	(24820844)	+	GA-rich	Low_complexity	1	141	(0)	1857332
12	23.8	2.2	2.1	chr19	34134452	34134497	(24483119)	+	G-rich	Low_complexity	1	47	(0)	1857971
205	34.9	4.5	0.0	chr19	34134880	34134985	(24482631)	C	MIRb	SINE/MIR	(118)	150	40	1857972
1892	13.6	1.9	1.9	chr19	34135064	34135373	(24482243)	C	AluJr	SINE/Alu	(2)	310	1	1857973
19	19.8	1.1	1.1	chr19	35845256	35845300	(22772316)	+	A-rich	Low_complexity	1	45	(0)	1861304
11	24.8	0.0	2.5	chr19	35987143	35987182	(22630434)	+	(CTGTCT)n	Simple_repeat	1	40	(0)	1861620
1083	15.2	0.5	5.1	chr19	35987472	35987668	(22629948)	+	AluJb	SINE/Alu	120	307	(5)	1861621
2275	12.1	0.0	0.3	chr19	35987699	35988011	(22629605)	+	AluSz	SINE/Alu	1	312	(0)	1861622
11	11.5	10.0	2.3	chr19	35995333	35995372	(22622244)	+	(GCGCCGAG)n	Simple_repeat	1	44	(0)	1861644
729	11.4	3.2	8.4	chr19	36139242	36139372	(22478244)	+	AluJr4	SINE/Alu	10	133	(179)	1861962
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
1211	31.3	12.7	2.2	chr19	36400527	36401654	(22215962)	+	L2a	LINE/L2	1495	2758	(661)	1862467
369	28.0	12.7	2.0	chr19	36401715	36401918	(22215698)	+	L2a	LINE/L2	2911	3139	(287)	1862467
2161	12.3	4.1	3.9	chr19	37647265	37647627	(20969989)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1864819
16	21.7	0.0	0.0	chr19	38316031	38316062	(20301554)	+	(C)n	Simple_repeat	1	32	(0)	1866378
268	26.3	49.5	0.0	chr19	38684077	38684209	(19933407)	+	MIR	SINE/MIR	60	259	(3)	1867246
28	30.0	0.0	4.7	chr19	38852165	38852292	(19765324)	+	(CCCCCGC)n	Simple_repeat	1	128	(0)	1867575
1265	15.5	0.9	1.9	chr19	39094544	39094756	(19522860)	+	AluJr	SINE/Alu	2	212	(100)	1868235
2048	10.5	6.2	0.9	chr19	39094763	39095098	(19522518)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1868236
11574	8.3	1.2	0.0	chr19	39095099	39096659	(19520957)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1868236
1509	21.7	9.6	3.9	chr19	39664763	39665047	(18952569)	+	L1M5	LINE/L1	5187	5496	(747)	1869452
2446	13.9	0.6	0.0	chr19	39665048	39665400	(18952216)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1869454
12205	9.9	1.2	0.3	chr19	39665402	39666965	(18950651)	C	THE1A-int	LTR/ERVL-MaLR	(1)	1579	1	1869454
405	28.2	9.1	2.3	chr19	40076455	40076628	(18540988)	+	L1MEf	LINE/L1	536	722	(5478)	1870196
9056	17.6	5.2	1.6	chr19	40076626	40077211	(18540405)	+	L1M2	LINE/L1	1526	2115	(5451)	1870197
17	18.4	2.3	0.0	chr19	40218254	40218296	(18399320)	+	(CGAGCC)n	Simple_repeat	1	44	(0)	1870515
187	37.0	0.0	1.4	chr19	40219654	40219727	(18397889)	C	L2b	LINE/L2	(78)	3297	3225	1870520
453	33.0	4.9	0.9	chr19	40219783	40219999	(18397617)	+	MIR	SINE/MIR	36	261	(1)	1870521
216	20.0	2.0	0.0	chr19	40220031	40220080	(18397536)	+	L2a	LINE/L2	3376	3426	(0)	1870522
28	19.2	0.0	0.0	chr19	40605493	40605551	(18012065)	+	(GGCGGA)n	Simple_repeat	1	59	(0)	1871506
30	0.0	0.0	0.0	chr19	40715846	40715871	(17901745)	+	(TG)n	Simple_repeat	1	26	(0)	1871775
193	30.9	11.8	0.0	chr19	40716067	40716163	(17901453)	+	MIR3	SINE/MIR	82	191	(17)	1871776
4302	5.5	0.4	0.0	chr19	41581035	41581544	(17036072)	+	MER9a1	LTR/ERVK	1	512	(1)	1873616
2198	12.9	5.0	0.0	chr19	41581545	41581870	(17035746)	C	THE1B	LTR/ERVL-MaLR	(21)	343	1	1873617
11623	9.1	1.0	2.9	chr19	41581871	41583480	(17034136)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1873617
11	21.5	6.0	1.9	chr19	41928335	41928384	(16689232)	+	(GAGAGCT)n	Simple_repeat	1	53	(0)	1874188
13	23.8	3.9	1.9	chr19	41928395	41928445	(16689171)	+	(GCGG)n	Simple_repeat	1	53	(0)	1874189
35	9.8	0.0	0.0	chr19	41928464	41928518	(16689098)	+	(CTC)n	Simple_repeat	1	55	(0)	1874190
12	19.7	0.0	5.1	chr19	41928531	41928569	(16689047)	+	(GCCC)n	Simple_repeat	1	39	(0)	1874191
19	14.3	2.6	0.0	chr19	41928590	41928628	(16688988)	+	(GGC)n	Simple_repeat	1	40	(0)	1874192
14	18.6	2.7	0.0	chr19	41928741	41928777	(16688839)	+	G-rich	Low_complexity	1	38	(0)	1874193
14	19.1	0.0	2.6	chr19	41928785	41928822	(16688794)	+	(CCCCT)n	Simple_repeat	1	38	(0)	1874194
17	9.4	5.9	5.6	chr19	42076164	42076214	(16541402)	+	(GCGAGA)n	Simple_repeat	1	54	(0)	1874520
12	13.9	6.2	0.0	chr19	42176848	42176879	(16440737)	+	(CGCC)n	Simple_repeat	1	34	(0)	1874737
30	22.1	0.0	3.6	chr19	42177009	42177092	(16440524)	+	(GCGG)n	Simple_repeat	1	84	(0)	1874738
17	6.5	2.8	5.4	chr19	42177108	42177143	(16440473)	+	(GCCC)n	Simple_repeat	1	37	(0)	1874739
28	3.3	0.0	0.0	chr19	42177252	42177282	(16440334)	+	(CCCGCT)n	Simple_repeat	1	31	(0)	1874740
31	0.0	0.0	0.0	chr19	42370844	42370872	(16246744)	+	(G)n	Simple_repeat	1	29	(0)	1875128
890	27.1	17.9	3.5	chr19	42377803	42378104	(16239512)	C	L2a	LINE/L2	(618)	2801	2420	1875147
612	23.1	11.8	1.1	chr19	42378108	42378387	(16239229)	C	LTR33A_	LTR/ERVL	(4)	527	214	1875149
28	8.6	0.0	0.0	chr19	42387652	42387689	(16229927)	+	(T)n	Simple_repeat	1	38	(0)	1875173
2433	9.3	0.0	0.0	chr19	42387700	42388009	(16229607)	+	AluSg	SINE/Alu	1	310	(0)	1875174
1815	19.4	0.3	0.0	chr19	43112068	43112351	(15505265)	C	AluJb	SINE/Alu	(24)	288	4	1876243
2868	0.7	0.0	0.0	chr19	43451180	43451486	(15166130)	+	AluYa5	SINE/Alu	1	307	(4)	1876801
1724	16.5	6.0	5.3	chr19	43451487	43451502	(15166114)	+	THE1D	LTR/ERVL-MaLR	190	210	(171)	1876800
36	5.2	0.0	0.0	chr19	43451503	43451542	(15166074)	+	(CT)n	Simple_repeat	1	40	(0)	1876802
1724	16.5	6.0	5.3	chr19	43451543	43451656	(15165960)	+	THE1D	LTR/ERVL-MaLR	211	321	(60)	1876800
2032	16.2	0.0	0.0	chr19	43451657	43451958	(15165658)	+	AluSx1	SINE/Alu	3	304	(8)	1876803
390	27.7	5.7	0.7	chr19	43951581	43951729	(14665887)	+	MIR	SINE/MIR	83	239	(23)	1877972
2653	10.5	0.8	0.8	chr19	44468386	44468749	(14148867)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1878781
2349	13.6	3.0	1.4	chr19	44468782	44469139	(14148477)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1878782
2499	10.6	0.6	0.6	chr19	44625711	44626069	(13991547)	+	THE1B	LTR/ERVL-MaLR	1	359	(5)	1879159
20	19.2	3.8	0.0	chr19	44809006	44809058	(13808558)	+	G-rich	Low_complexity	1	55	(0)	1879683
17	13.4	2.9	0.0	chr19	44891217	44891250	(13726366)	+	(GGC)n	Simple_repeat	1	35	(0)	1879899
23	25.0	2.9	4.7	chr19	44891431	44891533	(13726083)	+	(GCC)n	Simple_repeat	1	106	(0)	1879900
22	26.8	5.4	2.5	chr19	44955347	44955458	(13662158)	+	(CGG)n	Simple_repeat	1	118	(0)	1880074
36	0.0	0.0	0.0	chr19	45496963	45496995	(13120621)	+	(GCC)n	Simple_repeat	1	33	(0)	1881467
12	16.3	7.0	2.2	chr19	45770291	45770333	(12847283)	+	(GCCCCG)n	Simple_repeat	1	46	(0)	1882222
924	30.4	4.8	5.4	chr19	45862394	45862941	(12754675)	C	L2b	LINE/L2	(1)	3374	2823	1882441
16	0.0	0.0	0.0	chr19	45863114	45863133	(12754483)	+	(CCG)n	Simple_repeat	1	20	(0)	1882442
25	27.4	0.0	1.3	chr19	45886057	45886132	(12731484)	+	(GCC)n	Simple_repeat	1	76	(0)	1882486
255	31.5	6.7	1.8	chr19	45886406	45886518	(12731098)	+	MIR	SINE/MIR	34	152	(110)	1882487
1909	15.5	6.3	1.9	chr19	46208549	46208910	(12408706)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	1883126
393	28.1	1.4	7.3	chr19	46208911	46208987	(12408629)	C	MER70B	LTR/ERVL	(487)	91	22	1883125
505	29.6	17.8	0.0	chr19	46209002	46209200	(12408416)	+	L2b	LINE/L2	3133	3374	(1)	1883121
2473	6.1	0.0	1.6	chr19	46826451	46826761	(11790855)	+	AluY	SINE/Alu	1	306	(5)	1884667
1320	11.2	2.1	0.0	chr19	46827145	46827332	(11790284)	C	AluYh3	SINE/Alu	(0)	311	120	1884668
16	19.3	2.2	4.3	chr19	46860826	46860870	(11756746)	+	(CG)n	Simple_repeat	1	46	(0)	1884769
22	6.6	0.0	0.0	chr19	46860910	46860941	(11756675)	+	(GAGG)n	Simple_repeat	1	32	(0)	1884770
18	22.1	0.0	0.0	chr19	46860965	46861001	(11756615)	+	(C)n	Simple_repeat	1	37	(0)	1884771
13	22.7	2.3	2.3	chr19	46861010	46861052	(11756564)	+	(GCG)n	Simple_repeat	1	44	(0)	1884772
24	11.1	6.1	0.0	chr19	46861071	46861119	(11756497)	+	(CCG)n	Simple_repeat	1	52	(0)	1884773
13	12.0	3.7	0.0	chr19	46861314	46861340	(11756276)	+	GA-rich	Low_complexity	1	28	(0)	1884774
12	22.4	0.0	6.4	chr19	47130933	47130979	(11486637)	+	GA-rich	Low_complexity	1	47	(0)	1885344
1790	13.7	5.6	2.6	chr19	47321671	47322014	(11295602)	C	L1MD1	LINE/L1	(0)	6242	5888	1885866
2505	8.2	0.6	0.3	chr19	47322106	47322458	(11295158)	C	THE1A	LTR/ERVL-MaLR	(1)	354	1	1885867
194	29.0	8.6	0.9	chr19	47607981	47608088	(11009528)	+	L2b	LINE/L2	3249	3365	(10)	1886566
967	26.4	11.4	3.2	chr19	48190313	48190688	(10426928)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	1	1888161
12	4.3	8.3	0.0	chr19	48721317	48721340	(9896276)	+	(GGGT)n	Simple_repeat	1	26	(0)	1889463
16	24.1	3.3	1.6	chr19	48874541	48874600	(9743016)	+	GA-rich	Low_complexity	1	62	(0)	1889838
2111	12.9	0.0	1.6	chr19	48874919	48875229	(9742387)	C	AluSz6	SINE/Alu	(5)	307	2	1889839
2557	8.2	3.7	0.3	chr19	49287423	49287765	(9329851)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1890803
11924	8.4	1.4	0.7	chr19	49287766	49289334	(9328282)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1890803
14	21.5	3.0	5.9	chr19	49441430	49441495	(9176121)	+	G-rich	Low_complexity	1	68	(0)	1891099
13	15.2	0.0	3.2	chr19	49441582	49441612	(9176004)	+	(GCCCC)n	Simple_repeat	1	31	(0)	1891100
12	19.3	0.0	5.1	chr19	49929309	49929347	(8688269)	+	(CCCGCTC)n	Simple_repeat	1	39	(0)	1892228
2511	23.3	3.8	10.2	chr19	50082221	50082432	(8535184)	C	L1ME3A	LINE/L1	(380)	5793	5607	1892582
496	14.0	18.9	0.0	chr19	50082433	50082539	(8535077)	C	FLAM_C	SINE/Alu	(10)	133	2	1892586
2511	23.3	3.8	10.2	chr19	50082540	50082757	(8534859)	C	L1ME3A	LINE/L1	(567)	5606	5389	1892582
4267	15.9	0.8	4.1	chr19	50135484	50135964	(8481652)	C	L1P4	LINE/L1	(2469)	3677	3219	1892740
1885	14.3	2.4	0.9	chr19	50135965	50136288	(8481328)	+	L1PB1	LINE/L1	5822	6150	(1)	1892741
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
198	31.5	8.9	7.1	chr19	50369139	50369237	(8248379)	C	MIRb	SINE/MIR	(58)	210	110	1893356
445	26.5	1.0	0.0	chr19	50369338	50369435	(8248181)	C	MLT1J2	LTR/ERVL-MaLR	(303)	145	47	1893357
1495	27.8	1.2	1.9	chr19	51905172	51905603	(6712013)	C	MER57F	LTR/ERV1	(6)	429	1	1896458
11115	14.0	0.4	0.2	chr19	52960545	52962193	(5655423)	+	HERVE-int	LTR/ERV1	5355	7006	(807)	1898547
315	38.4	0.6	3.4	chr19	55079870	55080047	(3537569)	+	MIRc	SINE/MIR	18	190	(78)	1902966
21	24.1	6.2	2.0	chr19	55080285	55080380	(3537236)	+	(AGCTGG)n	Simple_repeat	1	102	(0)	1902967
2098	10.6	0.0	3.3	chr19	55604454	55604595	(3013021)	C	AluJb	SINE/Alu	(176)	136	1	1904128
233	24.2	9.9	2.1	chr19	55604936	55605028	(3012588)	C	MER5A	DNA/hAT-Charlie	(3)	186	86	1904130
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
517	6.2	0.0	0.0	chr19	56586701	56586765	(2030851)	C	THE1A-int	LTR/ERVL-MaLR	(1515)	65	1	1906040
2736	8.2	0.6	0.0	chr19	56586766	56587118	(2030498)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1906040
2454	7.5	0.0	0.0	chr19	56587197	56587491	(2030125)	C	AluY	SINE/Alu	(16)	295	1	1906041
240	23.5	1.4	6.3	chr19	57578179	57578292	(1039324)	+	MIR	SINE/MIR	29	130	(100)	1908002
195	28.3	14.1	2.1	chr2	3378179	3378344	(238815185)	C	MIR	SINE/MIR	(42)	226	41	1914391
2704	8.1	1.4	0.8	chr2	3859807	3860168	(238333361)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1915023
565	23.3	0.2	0.2	chr2	5022390	5023594	(237169935)	+	(CTACTA)n	Simple_repeat	1	1208	(0)	1916517
12312	9.5	1.0	0.1	chr2	7644424	7645987	(234547542)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	3	1920188
2541	10.8	3.4	0.3	chr2	7645990	7646333	(234547196)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1920188
2228	11.7	5.8	1.4	chr2	7800137	7800500	(234393029)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1920449
9823	13.0	4.3	0.6	chr2	7800527	7802033	(234391496)	+	THE1D-int	LTR/ERVL-MaLR	15	1580	(0)	1920449
909	31.0	4.2	4.7	chr2	9070941	9071394	(233122135)	C	MLT1J	LTR/ERVL-MaLR	(9)	503	52	1922270
462	24.3	3.6	0.0	chr2	9071395	9071535	(233121994)	+	FLAM_C	SINE/Alu	1	217	(85)	1922271
1321	27.8	6.3	0.9	chr2	9127346	9127781	(233065748)	+	MLT1F	LTR/ERVL-MaLR	88	548	(0)	1922378
2297	12.3	3.9	0.0	chr2	9181019	9181360	(233012169)	+	THE1B	LTR/ERVL-MaLR	2	357	(7)	1922510
189	29.9	3.8	4.5	chr2	9717920	9718052	(232475477)	C	L2b	LINE/L2	(454)	2965	2834	1923508
2340	12.5	0.8	1.4	chr2	9718131	9718487	(232475042)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1923510
2148	12.0	6.0	1.6	chr2	9859870	9860233	(232333296)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1923793
1577	20.8	6.4	1.9	chr2	9860234	9860335	(232333194)	C	L2a	LINE/L2	(995)	2424	2325	1923791
16	20.5	0.0	0.0	chr2	10079921	10079959	(232113570)	+	G-rich	Low_complexity	1	39	(0)	1924129
399	11.5	14.5	6.2	chr2	10120423	10120535	(232072994)	+	FLAM_C	SINE/Alu	12	135	(8)	1924224
16	25.3	7.0	0.0	chr2	10302815	10302885	(231890644)	+	(CGCCCCG)n	Simple_repeat	1	76	(0)	1924544
13	6.8	0.0	12.5	chr2	10302901	10302940	(231890589)	+	(GGC)n	Simple_repeat	1	40	(0)	1924545
16	15.5	3.3	0.0	chr2	10303275	10303304	(231890225)	+	(TG)n	Simple_repeat	1	31	(0)	1924546
1887	13.1	0.7	0.4	chr2	10383091	10383365	(231810164)	+	AluJo	SINE/Alu	1	276	(36)	1924672
17	18.1	0.0	7.0	chr2	10448011	10448067	(231745462)	+	(CCGCGGC)n	Simple_repeat	1	57	(0)	1924772
21	21.0	2.8	4.1	chr2	10448241	10448311	(231745218)	+	(CGG)n	Simple_repeat	1	73	(0)	1924773
17	20.2	6.1	2.9	chr2	10812723	10812788	(231380741)	+	(CCG)n	Simple_repeat	1	70	(0)	1925522
2576	9.1	0.8	0.8	chr2	10888895	10889249	(231304280)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1925673
94	27.7	0.6	4.2	chr2	11155100	11155450	(231038079)	+	G-rich	Low_complexity	1	353	(0)	1926128
222	21.6	3.9	7.5	chr2	11155885	11155964	(231037565)	C	MIRb	SINE/MIR	(77)	191	115	1926129
2483	11.9	0.0	0.8	chr2	11352187	11352542	(230840987)	C	THE1A	LTR/ERVL-MaLR	(0)	355	3	1926467
26	2.6	4.9	2.3	chr2	11746554	11746594	(230446935)	+	(TGCCCC)n	Simple_repeat	1	43	(0)	1927196
17	18.5	3.9	1.9	chr2	11746730	11746780	(230446749)	+	(GGCGG)n	Simple_repeat	1	53	(0)	1927197
346	23.9	4.4	2.5	chr2	11747131	11747266	(230446263)	C	MIRb	SINE/MIR	(124)	144	4	1927198
2205	13.1	3.3	2.5	chr2	12784849	12785209	(229408320)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1928876
11088	10.8	0.6	3.6	chr2	12785210	12786837	(229406692)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	1928876
12	28.7	0.0	0.0	chr2	12972406	12972447	(229221082)	+	A-rich	Low_complexity	1	42	(0)	1929184
2395	11.5	1.7	0.3	chr2	12972456	12972805	(229220724)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1929185
240	37.1	5.3	0.0	chr2	13739767	13739890	(228453639)	C	L2b	LINE/L2	(2)	3373	3243	1930195
1845	16.9	3.9	3.3	chr2	13739891	13740252	(228453277)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1930196
304	29.4	10.9	9.0	chr2	15495544	15495742	(226697787)	+	L1ME3B	LINE/L1	5950	6164	(78)	1932789
3200	19.6	4.4	1.0	chr2	15495743	15496073	(226697456)	+	L1MB8	LINE/L1	5444	5792	(386)	1932790
64	23.9	1.1	7.5	chr2	16665675	16665870	(225527659)	+	(CCCGC)n	Simple_repeat	1	235	(45)	1934872
21	23.3	0.0	0.0	chr2	16665871	16665915	(225527614)	+	(C)n	Simple_repeat	1	45	(0)	1934873
64	23.9	1.1	7.5	chr2	16665916	16665951	(225527578)	+	(CCCGC)n	Simple_repeat	236	280	(0)	1934872
2611	10.2	0.3	0.0	chr2	16696004	16696357	(225497172)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1934923
3216	13.3	0.3	10.9	chr2	17925083	17925439	(224268090)	+	MER4B	LTR/ERV1	1	319	(291)	1936724
2310	12.4	5.3	0.8	chr2	17925440	17925797	(224267732)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1936725
11675	12.1	0.9	1.7	chr2	17925798	17927440	(224266089)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	1936725
11	26.9	3.3	3.2	chr2	18560106	18560166	(223633363)	+	(CAGCCC)n	Simple_repeat	1	63	(0)	1937638
16	22.8	1.6	4.8	chr2	20224799	20224860	(221968669)	+	(CAGCGC)n	Simple_repeat	1	63	(0)	1939965
1903	25.4	4.6	1.3	chr2	20477953	20478335	(221715194)	+	MER90	LTR/ERV1	1	393	(182)	1940438
2800	8.2	0.3	0.3	chr2	20478336	20478690	(221714839)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1940439
1903	25.4	4.6	1.3	chr2	20478691	20478853	(221714676)	+	MER90	LTR/ERV1	394	566	(9)	1940438
11055	11.8	0.4	0.3	chr2	21982018	21983595	(220209934)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1942455
2224	11.7	1.4	1.1	chr2	21983596	21983949	(220209580)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1942455
846	32.0	10.4	3.3	chr2	22719948	22720217	(219473312)	+	ERVL-int	LTR/ERVL	4479	4782	(975)	1943431
2430	12.5	0.6	0.0	chr2	22720218	22720570	(219472959)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1943432
27	19.8	2.8	1.4	chr2	23385555	23385633	(218807896)	+	GA-rich	Low_complexity	1	80	(0)	1944314
14	9.3	0.0	0.0	chr2	23385906	23385928	(218807601)	+	(CGG)n	Simple_repeat	1	23	(0)	1944315
17	22.1	0.0	0.0	chr2	23926681	23926722	(218266807)	+	(CCCAGG)n	Simple_repeat	1	42	(0)	1945109
12	17.4	0.0	8.7	chr2	23926821	23926866	(218266663)	+	(GGCC)n	Simple_repeat	1	46	(0)	1945110
19	24.8	5.6	2.1	chr2	23940376	23940464	(218253065)	+	(GCGCCC)n	Simple_repeat	1	94	(0)	1945145
15	21.9	0.0	2.3	chr2	23940659	23940702	(218252827)	+	G-rich	Low_complexity	1	44	(0)	1945146
2370	9.6	0.3	13.9	chr2	24484668	24485078	(217708451)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1946241
418	25.0	7.7	0.0	chr2	24485096	24485227	(217708302)	+	L1ME4a	LINE/L1	5960	6102	(22)	1946242
14	10.0	6.2	0.0	chr2	25041967	25041998	(217151531)	+	G-rich	Low_complexity	1	34	(0)	1947188
4321	10.2	2.6	1.1	chr2	25086893	25086937	(217106592)	C	L1MC1	LINE/L1	(1008)	5325	5276	1947279
2784	9.9	0.8	0.3	chr2	25086938	25087310	(217106219)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1947281
30	17.0	0.0	0.0	chr2	26245248	26245300	(215948229)	+	(GT)n	Simple_repeat	1	53	(0)	1949599
2418	31.7	6.7	6.2	chr2	27173858	27175400	(215018129)	+	L2	LINE/L2	548	2099	(1320)	1951309
13	30.5	3.3	0.0	chr2	27495207	27495266	(214698263)	+	(GGCCC)n	Simple_repeat	1	62	(0)	1951913
25	16.9	4.3	2.7	chr2	28392701	28392770	(213800759)	+	(CCT)n	Simple_repeat	1	73	(0)	1953484
25	27.4	4.2	0.0	chr2	28392892	28392933	(213800596)	+	(CGAG)n	Simple_repeat	1	71	(29)	1953485
23	11.2	0.0	0.0	chr2	28392934	28392972	(213800557)	+	(GAGAGA)n	Simple_repeat	1	39	(0)	1953486
25	27.4	4.2	0.0	chr2	28392973	28392987	(213800542)	+	(CGAG)n	Simple_repeat	72	100	(0)	1953485
181	33.3	4.5	0.0	chr2	28594247	28594309	(213599220)	C	L2c	LINE/L2	(261)	3126	3061	1953831
2774	9.4	0.3	0.3	chr2	29187568	29187930	(213005599)	+	THE1B	LTR/ERVL-MaLR	2	364	(0)	1954921
2920	7.4	1.1	0.0	chr2	29622240	29622590	(212570939)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1955595
2604	8.2	0.0	0.0	chr2	30329615	30329943	(211863586)	C	L1PA7	LINE/L1	(5)	6149	5821	1956787
1768	9.0	0.0	0.1	chr2	30329944	30330179	(211863350)	C	THE1A	LTR/ERVL-MaLR	(120)	235	1	1956786
21	24.4	1.4	2.8	chr2	32064106	32064176	(210129353)	+	(GCGCCG)n	Simple_repeat	1	72	(0)	1959449
22	23.4	1.6	1.6	chr2	32357248	32357347	(209836182)	+	(GGC)n	Simple_repeat	1	100	(0)	1960156
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
18	17.3	2.0	4.0	chr2	32947622	32947670	(209245859)	+	(CCG)n	Simple_repeat	1	50	(0)	1961245
21	14.9	0.0	4.2	chr2	32947823	32947870	(209245659)	+	(GCCC)n	Simple_repeat	1	48	(0)	1961246
2295	11.8	2.0	0.6	chr2	34238316	34238665	(207954864)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1963273
1989	22.7	7.1	3.2	chr2	34238666	34238757	(207954772)	C	MER45B	DNA/hAT-Tip100	(953)	87	3	1963271
412	26.6	17.1	1.0	chr2	34238946	34239175	(207954354)	+	MIRb	SINE/MIR	2	262	(0)	1963274
15	18.5	5.9	1.9	chr2	36355764	36355818	(205837711)	+	(GGAGC)n	Simple_repeat	1	57	(0)	1965962
15	20.1	5.7	1.8	chr2	36355925	36355977	(205837552)	+	(CGC)n	Simple_repeat	1	56	(0)	1965963
19	0.0	3.9	0.0	chr2	36356042	36356067	(205837462)	+	(GGA)n	Simple_repeat	1	27	(0)	1965964
12	20.0	0.0	0.0	chr2	36356265	36356293	(205837236)	+	GA-rich	Low_complexity	1	29	(0)	1965965
14	21.9	1.6	6.5	chr2	36356325	36356348	(205837181)	+	(CGGCTG)n	Simple_repeat	1	39	(23)	1965966
16	8.5	0.0	0.0	chr2	36356349	36356373	(205837156)	+	(GCT)n	Simple_repeat	1	25	(0)	1965967
14	21.9	1.6	6.5	chr2	36356374	36356385	(205837144)	+	(CGGCTG)n	Simple_repeat	40	62	(0)	1965966
644	26.6	19.6	1.6	chr2	36701877	36702250	(205491279)	C	L2a	LINE/L2	(12)	3414	2957	1966392
22	14.3	2.1	2.0	chr2	36966336	36966383	(205227146)	+	(GCC)n	Simple_repeat	1	49	(0)	1966852
35	0.0	0.0	0.0	chr2	36966899	36966928	(205226601)	+	(AC)n	Simple_repeat	1	30	(0)	1966853
310	33.8	11.7	4.1	chr2	37196705	37197019	(204996510)	C	L1M4b	LINE/L1	(6274)	593	252	1967324
228	2.8	5.3	0.0	chr2	37197377	37197412	(204996117)	C	tRNA-Gly-GGA	tRNA	(37)	38	1	1967325
2178	9.1	3.0	0.3	chr2	37197590	37197876	(204995653)	+	AluSz	SINE/Alu	1	295	(17)	1967326
1991	25.3	7.1	2.5	chr2	37436685	37437860	(204755669)	+	L1ME1	LINE/L1	2149	3476	(2670)	1967730
1447	15.2	0.0	2.7	chr2	37437862	37437895	(204755634)	+	AluJb	SINE/Alu	81	114	(198)	1967731
2035	14.0	3.7	0.6	chr2	37437896	37438239	(204755290)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1967732
2789	7.1	0.3	0.3	chr2	37955488	37955842	(204237687)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1968510
10937	18.9	2.4	1.4	chr2	37955843	37956649	(204236880)	C	L1MB3	LINE/L1	(2284)	4092	3264	1968509
13	24.4	0.0	4.3	chr2	38376977	38377023	(203816506)	+	G-rich	Low_complexity	1	47	(0)	1969097
16	21.7	3.1	4.5	chr2	38377423	38377486	(203816043)	+	(CGCC)n	Simple_repeat	1	66	(0)	1969098
1788	12.5	0.7	7.8	chr2	38600445	38600764	(203592765)	+	AluJb	SINE/Alu	1	297	(15)	1969541
232	32.2	6.3	6.9	chr2	38600765	38600832	(203592697)	C	MIRc	SINE/MIR	(192)	76	8	1969540
16	10.8	3.3	0.0	chr2	38602456	38602485	(203591044)	+	(GCC)n	Simple_repeat	1	31	(0)	1969543
26	6.1	0.0	0.0	chr2	39120971	39121004	(203072525)	+	(GCC)n	Simple_repeat	1	34	(0)	1970592
19	11.2	0.0	0.0	chr2	39121123	39121151	(203072378)	+	(GA)n	Simple_repeat	1	29	(0)	1970593
27	19.5	3.1	5.9	chr2	39437114	39437211	(202756318)	+	(CGC)n	Simple_repeat	1	101	(0)	1971190
16	18.8	2.3	2.2	chr2	39437296	39437339	(202756190)	+	(CTC)n	Simple_repeat	1	45	(0)	1971191
18	27.4	2.8	1.4	chr2	42568560	42568631	(199624898)	+	(CCCCT)n	Simple_repeat	1	74	(0)	1975882
34	23.4	1.9	2.8	chr2	42568639	42568743	(199624786)	+	(GGC)n	Simple_repeat	1	107	(0)	1975883
13	14.7	0.0	3.1	chr2	42568923	42568958	(199624571)	+	(CTCCC)n	Simple_repeat	1	34	(0)	1975884
18853	11.7	3.6	2.9	chr2	42729401	42731329	(199462200)	C	L1MA3	LINE/L1	(1118)	6447	4438	1976232
2653	7.8	2.8	0.0	chr2	42731330	42731674	(199461855)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1976235
10706	9.0	7.5	0.0	chr2	42731675	42733136	(199460393)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1976235
195	31.6	0.0	9.5	chr2	43084561	43084602	(199108927)	+	MIRc	SINE/MIR	170	211	(57)	1976837
1908	21.4	9.5	9.8	chr2	43084603	43085227	(199108302)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	5	1976838
26	30.2	2.5	2.4	chr2	44169031	44169152	(198024377)	+	(GGC)n	Simple_repeat	1	125	(0)	1978731
2292	11.2	4.4	3.1	chr2	44791110	44791468	(197402061)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1979750
16229	13.5	3.8	1.9	chr2	46103534	46106199	(196087330)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	1	1981742
22	3.5	0.0	0.0	chr2	46941357	46941385	(195252144)	+	(GCT)n	Simple_repeat	1	29	(0)	1983105
28	0.0	0.0	0.0	chr2	47905403	47905429	(194288100)	+	(CCCG)n	Simple_repeat	1	27	(0)	1985041
62	27.1	0.0	0.0	chr2	47905518	47905677	(194287852)	+	(GGC)n	Simple_repeat	1	160	(0)	1985042
12	24.1	0.0	0.0	chr2	47906000	47906033	(194287496)	+	GA-rich	Low_complexity	1	34	(0)	1985043
18	0.0	0.0	0.0	chr2	47906067	47906089	(194287440)	+	(GCG)n	Simple_repeat	1	23	(0)	1985044
15	27.3	1.6	3.2	chr2	47906142	47906203	(194287326)	+	G-rich	Low_complexity	1	63	(0)	1985045
2653	9.8	2.3	0.0	chr2	48102631	48102977	(194090552)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1985371
2307	27.1	4.3	5.2	chr2	48102978	48103328	(194090201)	+	L1ME3B	LINE/L1	4928	5264	(882)	1985370
2038	14.9	0.0	0.7	chr2	48468531	48468825	(193724704)	+	AluJb	SINE/Alu	1	293	(19)	1986017
34	0.0	0.0	0.0	chr2	48468830	48468858	(193724671)	+	(TG)n	Simple_repeat	1	29	(0)	1986018
144	18.2	0.0	4.2	chr2	48468859	48468885	(193724644)	+	(TA)n	Simple_repeat	1	27	(0)	1986019
2635	9.3	0.0	2.5	chr2	48468886	48469249	(193724280)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1986020
144	18.2	0.0	4.2	chr2	48469250	48469261	(193724268)	+	(TA)n	Simple_repeat	2	13	(0)	1986021
41	0.0	0.0	0.0	chr2	48469262	48469296	(193724233)	+	(TG)n	Simple_repeat	1	35	(0)	1986022
144	18.2	0.0	4.2	chr2	48469297	48469585	(193723944)	+	(TA)n	Simple_repeat	2	277	(0)	1986023
1852	19.9	3.4	7.8	chr2	49099089	49099135	(193094394)	+	MLT1C	LTR/ERVL-MaLR	1	46	(421)	1986990
2193	12.6	4.1	3.6	chr2	49099136	49099497	(193094032)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1986991
32	2.7	2.6	0.0	chr2	53787126	53787163	(188406366)	+	(CCT)n	Simple_repeat	1	39	(0)	1993127
17	25.7	4.4	1.4	chr2	54457100	54457167	(187736362)	+	(GCCCCC)n	Simple_repeat	1	71	(0)	1994402
18	24.0	1.2	7.1	chr2	54724835	54724918	(187468611)	+	(CGG)n	Simple_repeat	1	85	(0)	1994740
810	20.2	0.0	0.0	chr2	55091546	55091669	(187101860)	+	AluJo	SINE/Alu	1	124	(188)	1995274
3019	7.6	0.0	0.0	chr2	55091693	55092047	(187101482)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1995275
2439	6.5	0.0	0.3	chr2	55223800	55224093	(186969436)	C	AluSg	SINE/Alu	(16)	294	2	1995514
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
1834	17.7	3.4	1.6	chr2	59392620	59392993	(182800536)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2001066
12	26.8	0.0	8.9	chr2	61065894	61065972	(181127557)	+	G-rich	Low_complexity	1	79	(0)	2003591
18	22.0	0.0	5.2	chr2	64653805	64653862	(177539667)	+	(GGC)n	Simple_repeat	1	58	(0)	2009702
22	3.6	0.0	0.0	chr2	64750746	64750774	(177442755)	+	(GAG)n	Simple_repeat	1	29	(0)	2009875
18	6.3	2.7	5.3	chr2	64750840	64750876	(177442653)	+	(GGC)n	Simple_repeat	1	38	(0)	2009876
18	11.9	3.9	5.7	chr2	64751033	64751083	(177442446)	+	(GGAGC)n	Simple_repeat	1	53	(0)	2009877
14	14.6	5.0	2.4	chr2	64767982	64768028	(177425501)	+	(CGCCCG)n	Simple_repeat	1	48	(0)	2009902
2231	10.3	1.6	0.0	chr2	65371796	65372095	(176821434)	+	AluSz	SINE/Alu	3	307	(5)	2011130
18	6.8	3.2	0.0	chr2	66434175	66434205	(175759324)	+	(CCGCG)n	Simple_repeat	1	32	(0)	2012777
2374	23.8	6.9	6.0	chr2	67114597	67115279	(175078250)	C	L1ME1	LINE/L1	(58)	6294	5618	2013647
2713	7.9	0.6	0.0	chr2	67115280	67115632	(175077897)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2013648
2374	24.8	6.8	5.7	chr2	67115633	67115856	(175077673)	C	L1ME1	LINE/L1	(735)	5617	5386	2013647
1215	21.0	4.8	2.6	chr2	67503769	67504071	(174689458)	C	MER2	DNA/TcMar-Tigger	(34)	311	2	2014190
2754	8.5	0.3	0.0	chr2	67504107	67504460	(174689069)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2014191
16	18.9	2.9	7.0	chr2	69387229	69387297	(172806232)	+	(CCGCCGC)n	Simple_repeat	1	71	(0)	2016984
12	26.2	0.0	2.3	chr2	69387605	69387647	(172805882)	+	(GCAGGAA)n	Simple_repeat	1	43	(0)	2016985
1654	22.1	3.4	5.6	chr2	69755708	69756153	(172437376)	+	MER63B	DNA/hAT-Blackjack	1	436	(0)	2017688
188	20.0	5.2	5.2	chr2	69756349	69756406	(172437123)	+	MIR3	SINE/MIR	96	153	(55)	2017689
12	28.2	1.9	1.9	chr2	70142416	70142468	(172051061)	+	(CCGC)n	Simple_repeat	1	54	(0)	2018486
14	20.2	5.2	6.2	chr2	70142568	70142644	(172050885)	+	(CCCGTC)n	Simple_repeat	1	81	(0)	2018487
14	14.1	0.0	3.0	chr2	70302019	70302051	(171891478)	+	(CCGCG)n	Simple_repeat	1	33	(0)	2018832
463	29.0	2.4	0.0	chr2	70531545	70531668	(171661861)	C	MER117	DNA/hAT-Charlie	(0)	197	71	2019244
1923	13.8	2.9	4.2	chr2	70583991	70584301	(171609228)	+	AluJb	SINE/Alu	6	312	(0)	2019325
374	20.4	16.3	1.0	chr2	70584364	70584467	(171609062)	+	L1MB7	LINE/L1	6053	6175	(9)	2019326
1292	24.6	4.4	8.7	chr2	70750337	70750808	(171442721)	+	MLT1C	LTR/ERVL-MaLR	17	467	(0)	2019550
12	11.6	3.3	3.2	chr2	70767200	70767229	(171426300)	+	G-rich	Low_complexity	1	31	(0)	2019580
12	17.6	3.1	0.0	chr2	70767439	70767470	(171426059)	+	(CGCCC)n	Simple_repeat	1	33	(0)	2019581
21	28.1	3.4	1.1	chr2	70767477	70767490	(171426039)	+	(GAGGC)n	Simple_repeat	1	26	(65)	2019582
22	10.5	2.3	2.2	chr2	70767491	70767534	(171425995)	+	G-rich	Low_complexity	1	45	(0)	2019583
21	28.1	3.4	1.1	chr2	70767535	70767565	(171425964)	+	(GAGGC)n	Simple_repeat	27	91	(0)	2019582
495	25.9	6.2	0.6	chr2	70871902	70872068	(171321461)	+	MIRb	SINE/MIR	4	180	(88)	2019756
377	30.0	18.1	4.3	chr2	70994037	70994405	(171199124)	C	L2b	LINE/L2	(1)	3386	2956	2019948
24	17.1	4.3	2.8	chr2	70994826	70994894	(171198635)	+	(GCC)n	Simple_repeat	1	72	(0)	2019949
11964	8.8	1.0	0.2	chr2	71656914	71658480	(170535049)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2020971
2788	7.9	0.3	0.0	chr2	71658481	71658834	(170534695)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2020971
2834	25.6	5.7	9.7	chr2	72060926	72061322	(170132207)	C	L1MEh	LINE/L1	(697)	1538	1169	2021528
1929	14.8	7.6	0.8	chr2	72061323	72061676	(170131853)	C	THE1D	LTR/ERVL-MaLR	(0)	381	2	2021530
2834	25.6	5.7	9.7	chr2	72061677	72061859	(170131670)	C	L1MEh	LINE/L1	(1067)	1168	992	2021528
700	29.7	5.4	0.0	chr2	72540682	72540890	(169652639)	+	MER58A	DNA/hAT-Charlie	1	221	(3)	2022165
393	19.5	3.3	0.0	chr2	72540904	72540990	(169652539)	C	L1MC4	LINE/L1	(390)	7652	7563	2022164
2695	7.9	0.3	0.6	chr2	72540992	72541347	(169652182)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2022166
25	23.8	3.8	1.2	chr2	72541363	72541441	(169652088)	+	(TTTC)n	Simple_repeat	1	82	(0)	2022167
5352	16.1	2.3	3.4	chr2	72783622	72784435	(169409094)	C	L1MA4A	LINE/L1	(924)	5379	4559	2022555
2751	7.3	0.3	0.0	chr2	72784436	72784789	(169408740)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2022557
8419	9.3	2.1	1.0	chr2	72784790	72785940	(169407589)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	417	2022557
815	8.1	9.4	0.6	chr2	72917641	72917814	(169275715)	+	LTR2752	LTR/ERV1	947	1137	(126)	2022810
762	25.3	9.3	8.6	chr2	73329221	73329367	(168864162)	C	L1M7	LINE/L1	(4346)	1872	1732	2023525
2646	10.2	0.3	0.6	chr2	73329368	73329723	(168863806)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2023531
762	25.3	9.3	8.6	chr2	73329724	73329982	(168863547)	C	L1M7	LINE/L1	(4487)	1731	1463	2023525
2685	7.2	1.7	0.3	chr2	74905399	74905748	(167287781)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2026168
11661	9.2	1.9	0.2	chr2	74905750	74907293	(167286236)	C	THE1A-int	LTR/ERVL-MaLR	(1)	1579	10	2026168
14	8.4	0.0	3.7	chr2	74958682	74958708	(167234821)	+	(GGC)n	Simple_repeat	1	27	(0)	2026250
2661	8.6	0.3	0.0	chr2	75732826	75733176	(166460353)	C	THE1A	LTR/ERVL-MaLR	(1)	354	3	2027437
10604	9.2	7.3	0.0	chr2	75733179	75734642	(166458887)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2027437
1612	17.7	0.6	2.2	chr2	77021811	77022003	(165171526)	C	L1MA9	LINE/L1	(42)	6270	5985	2029094
2273	10.8	1.4	0.8	chr2	77022004	77022356	(165171173)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2029095
11109	9.8	2.3	0.3	chr2	77022357	77023904	(165169625)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2029095
2517	7.3	0.3	0.0	chr2	77780460	77780761	(164412768)	C	AluY	SINE/Alu	(7)	304	2	2030098
1380	10.9	0.5	3.8	chr2	77780763	77780972	(164412557)	+	THE1A	LTR/ERVL-MaLR	153	355	(0)	2030099
10366	11.1	4.0	0.0	chr2	77780973	77782489	(164411040)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2030099
2107	12.9	1.7	0.8	chr2	77782491	77782841	(164410688)	+	THE1A	LTR/ERVL-MaLR	2	355	(0)	2030099
1591	11.7	1.8	0.0	chr2	84818291	84818513	(157375016)	+	AluJo	SINE/Alu	85	311	(1)	2039475
933	23.0	6.7	2.6	chr2	84818518	84818789	(157374740)	+	L1MC5	LINE/L1	8663	8946	(358)	2039474
2148	12.6	0.3	0.7	chr2	84818792	84819085	(157374444)	+	AluSz	SINE/Alu	1	293	(19)	2039476
235	30.7	7.4	2.2	chr2	84881618	84881707	(157311822)	+	MIRb	SINE/MIR	148	242	(26)	2039571
278	25.7	11.4	5.1	chr2	84881924	84882079	(157311450)	C	Charlie4z	DNA/hAT-Charlie	(0)	167	1	2039573
518	16.2	0.0	5.7	chr2	84882361	84882465	(157311064)	+	AluSz6	SINE/Alu	214	312	(0)	2039574
14	16.8	3.9	5.6	chr2	84970686	84970737	(157222792)	+	(GGCCCA)n	Simple_repeat	1	54	(0)	2039809
13	25.9	3.2	3.1	chr2	84970747	84970809	(157222720)	+	G-rich	Low_complexity	1	65	(0)	2039810
30	2.4	7.0	0.0	chr2	84971261	84971303	(157222226)	+	(CCG)n	Simple_repeat	1	46	(0)	2039811
12	11.5	3.3	3.2	chr2	84971721	84971750	(157221779)	+	G-rich	Low_complexity	1	31	(0)	2039812
15	16.9	10.6	0.0	chr2	85539084	85539130	(156654399)	+	(GC)n	Simple_repeat	1	52	(0)	2040998
12	16.6	4.5	4.3	chr2	85539144	85539187	(156654342)	+	(CCGCG)n	Simple_repeat	1	46	(0)	2040999
1432	23.0	1.9	1.7	chr2	85802402	85802763	(156390766)	+	MLT1A0	LTR/ERVL-MaLR	1	363	(2)	2041528
2331	12.1	0.0	0.3	chr2	85802958	85803270	(156390259)	+	AluSz	SINE/Alu	1	312	(0)	2041529
16766	14.8	5.7	1.3	chr2	85833046	85836751	(156356778)	+	L1MA4	LINE/L1	3193	7071	(648)	2041598
2271	12.2	2.5	0.9	chr2	85836752	85837098	(156356431)	C	THE1A	LTR/ERVL-MaLR	(2)	353	1	2041600
11527	8.4	3.2	0.3	chr2	85882850	85883139	(156310390)	+	THE1A-int	LTR/ERVL-MaLR	1277	1580	(0)	2041670
2618	8.2	0.6	2.5	chr2	85883140	85883501	(156310028)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2041670
26	9.5	8.2	3.8	chr2	86337511	86337584	(155855945)	+	(GCGGC)n	Simple_repeat	1	77	(0)	2042489
14	0.0	0.0	0.0	chr2	86337684	86337701	(155855828)	+	(GGC)n	Simple_repeat	1	18	(0)	2042490
17	24.4	1.0	8.2	chr2	86623345	86623440	(155570089)	+	G-rich	Low_complexity	1	97	(0)	2042943
2858	7.0	0.0	0.3	chr2	87555740	87556095	(154637434)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2044406
11892	9.3	1.0	0.1	chr2	88243172	88244736	(153948793)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2045558
1954	14.6	7.0	0.6	chr2	88244737	88245068	(153948461)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2045558
1540	16.7	4.6	3.6	chr2	88245069	88245282	(153948247)	+	AluJr4	SINE/Alu	61	283	(29)	2045557
29	5.4	0.0	8.7	chr2	89787191	89787259	(152406270)	+	(GATTCCATTC)n	Simple_repeat	1	69	(0)	2047588
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
19	20.4	0.0	3.7	chr2	95345722	95345775	(146847754)	+	G-rich	Low_complexity	1	54	(0)	2050548
2567	8.5	0.8	2.5	chr2	95733253	95733613	(146459916)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2051142
25	28.2	2.0	6.0	chr2	96760837	96760984	(145432545)	+	G-rich	Low_complexity	1	151	(0)	2052732
18	23.2	1.7	3.3	chr2	96817114	96817172	(145376357)	+	(GGC)n	Simple_repeat	1	60	(0)	2052850
14	25.8	1.7	3.3	chr2	96869369	96869427	(145324102)	+	(CGGCC)n	Simple_repeat	1	60	(0)	2052932
12	14.4	7.5	2.3	chr2	97995381	97995420	(144198109)	+	(CCCGG)n	Simple_repeat	1	43	(0)	2054371
12	24.2	5.5	1.7	chr2	97995711	97995765	(144197764)	+	(CGG)n	Simple_repeat	1	58	(0)	2054372
12	22.2	4.8	0.0	chr2	97995801	97995842	(144197687)	+	(CGTG)n	Simple_repeat	1	44	(0)	2054373
11	27.2	2.0	2.0	chr2	97995932	97995981	(144197548)	+	G-rich	Low_complexity	1	51	(0)	2054374
1629	12.6	1.1	1.4	chr2	98081001	98081282	(144112247)	C	THE1A	LTR/ERVL-MaLR	(74)	281	1	2054517
41	14.8	2.8	5.4	chr2	100820014	100820121	(141373408)	+	GA-rich	Low_complexity	1	111	(0)	2058575
26	23.5	1.3	2.5	chr2	100820198	100820275	(141373254)	+	(GCG)n	Simple_repeat	1	79	(0)	2058576
15	18.8	2.3	2.2	chr2	100820364	100820407	(141373122)	+	(CCCGG)n	Simple_repeat	1	45	(0)	2058577
6250	17.2	3.9	3.8	chr2	101208572	101210456	(140983073)	C	L1MA4	LINE/L1	(14)	6286	4497	2059182
2292	12.5	3.3	2.8	chr2	101210457	101210818	(140982711)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2059183
6040	22.0	4.8	7.7	chr2	101210819	101211724	(140981805)	C	L1MA4	LINE/L1	(1650)	4496	3536	2059182
12	19.1	2.6	2.6	chr2	101308488	101308525	(140885004)	+	(GCCCGG)n	Simple_repeat	1	39	(0)	2059376
20	17.8	3.3	3.2	chr2	101698134	101698226	(140495303)	+	G-rich	Low_complexity	1	93	(0)	2060086
2281	14.4	1.9	1.1	chr2	101948019	101948390	(140245139)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2060384
1814	14.3	10.2	0.9	chr2	103506983	103507321	(138686208)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	2062409
7116	22.2	7.2	3.2	chr2	103510596	103513942	(138679587)	C	L1ME1	LINE/L1	(1800)	4737	1232	2062411
2316	11.1	0.6	8.1	chr2	103513943	103514326	(138679203)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2062414
5452	27.3	7.7	3.5	chr2	103514327	103515107	(138678422)	C	L1ME1	LINE/L1	(5402)	1231	109	2062411
290	28.6	15.1	4.4	chr2	104631312	104631462	(137562067)	C	MLT1H1	LTR/ERVL-MaLR	(0)	489	311	2063781
2085	11.5	3.7	6.9	chr2	104631463	104631855	(137561674)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	2063782
838	23.7	6.3	10.1	chr2	104631856	104632171	(137561358)	C	MLT1H1	LTR/ERVL-MaLR	(267)	312	11	2063781
2537	6.9	0.8	6.0	chr2	104995176	104995544	(137197985)	C	THE1A	LTR/ERVL-MaLR	(5)	350	1	2064239
432	26.2	20.4	0.6	chr2	105112368	105112804	(137080725)	C	L2a	LINE/L2	(253)	3173	2637	2064413
2760	8.0	1.1	0.0	chr2	105171188	105171538	(137021991)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2064507
12168	9.2	0.2	0.7	chr2	105171540	105171845	(137021684)	C	THE1A-int	LTR/ERVL-MaLR	(1)	1579	1282	2064507
12168	9.2	0.2	0.7	chr2	105172152	105173430	(137020099)	C	THE1A-int	LTR/ERVL-MaLR	(299)	1281	2	2064507
2696	9.6	0.3	0.0	chr2	105173432	105173785	(137019744)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2064507
1326	16.4	4.9	2.8	chr2	106759893	106760314	(135433215)	C	LTR29	LTR/ERV1	(4)	618	111	2066965
2074	14.1	3.4	1.1	chr2	106760315	106760686	(135432843)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2066966
1250	16.6	8.1	5.1	chr2	106760687	106760796	(135432733)	C	LTR29	LTR/ERV1	(485)	110	1	2066965
15	14.0	2.2	6.5	chr2	108449228	108449272	(133744257)	+	(GCG)n	Simple_repeat	1	46	(0)	2069253
2488	6.0	3.0	1.7	chr2	108533411	108533709	(133659820)	C	AluSp	SINE/Alu	(10)	303	1	2069391
48	25.5	2.9	4.7	chr2	108534262	108534469	(133659060)	+	(CGCCC)n	Simple_repeat	1	214	(0)	2069392
24	2.5	7.0	2.2	chr2	108534653	108534695	(133658834)	+	(CGGGC)n	Simple_repeat	1	46	(0)	2069393
1588	14.6	13.4	3.4	chr2	108993796	108994122	(133199407)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	2070095
906	25.5	7.3	5.3	chr2	109010151	109010437	(133183092)	C	HAL1	LINE/L1	(82)	2425	2130	2070127
1331	17.5	19.3	0.7	chr2	109010438	109010736	(133182793)	C	MLT1A	LTR/ERVL-MaLR	(2)	372	5	2070128
906	25.5	7.3	5.3	chr2	109010737	109010808	(133182721)	C	HAL1	LINE/L1	(378)	2129	2058	2070127
647	26.1	12.0	2.3	chr2	109010810	109011072	(133182457)	C	MLT2F	LTR/ERVL	(333)	330	39	2070129
2298	27.5	11.9	8.9	chr2	109011077	109012412	(133181117)	C	HAL1	LINE/L1	(652)	1855	474	2070127
295	36.4	1.4	2.1	chr2	109067513	109067655	(133125874)	+	MIR	SINE/MIR	90	231	(31)	2070219
506	27.6	8.0	0.0	chr2	109067691	109067886	(133125643)	+	L2a	LINE/L2	2484	2696	(723)	2070220
4162	16.5	2.9	9.3	chr2	109103228	109103781	(133089748)	C	MER4D	LTR/ERV1	(0)	903	394	2070287
19	28.0	0.0	6.5	chr2	109129576	109129667	(133063862)	+	(GGC)n	Simple_repeat	1	92	(0)	2070333
12	4.5	4.0	3.9	chr2	111120579	111120603	(131072926)	+	(GCC)n	Simple_repeat	1	26	(0)	2073127
51	3.8	0.0	0.0	chr2	111120967	111121021	(131072508)	+	(CGC)n	Simple_repeat	1	55	(0)	2073128
2832	7.3	0.0	0.3	chr2	111394744	111395099	(130798430)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2073468
11975	9.1	0.8	0.2	chr2	113373257	113374826	(128818703)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2076696
2598	8.5	0.6	2.5	chr2	113374827	113375188	(128818341)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2076696
13	15.4	2.5	4.9	chr2	113583676	113583715	(128609814)	+	G-rich	Low_complexity	1	41	(0)	2077016
181	37.9	5.8	8.3	chr2	113750802	113750862	(128442667)	C	L2c	LINE/L2	(18)	3357	3289	2077255
1832	17.7	0.3	1.0	chr2	113750863	113751167	(128442362)	+	AluJb	SINE/Alu	1	303	(9)	2077256
1328	13.5	10.2	0.8	chr2	116163158	116163396	(126030133)	C	LTR49	LTR/ERV1	(118)	477	214	2080762
2487	10.6	1.7	0.0	chr2	116163398	116163746	(126029783)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2080763
11094	10.9	0.6	0.8	chr2	116163747	116165004	(126028525)	+	THE1A-int	LTR/ERVL-MaLR	1	1254	(326)	2080763
633	23.8	21.3	6.5	chr2	117847611	117847934	(124345595)	C	LTR16A	LTR/ERVL	(2)	449	57	2082837
2681	5.6	5.1	0.0	chr2	117847935	117848271	(124345258)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2082838
633	24.5	9.2	8.0	chr2	117848272	117848321	(124345208)	C	LTR16A	LTR/ERVL	(395)	56	23	2082837
29	0.0	0.0	0.0	chr2	118014107	118014133	(124179396)	+	(GCC)n	Simple_repeat	1	27	(0)	2083040
186	22.2	0.0	4.5	chr2	119431377	119431442	(122762087)	C	MIRc	SINE/MIR	(139)	129	67	2085324
17	8.5	2.3	6.8	chr2	119431777	119431819	(122761710)	+	(CGCCC)n	Simple_repeat	1	44	(0)	2085325
495	24.9	23.7	0.5	chr2	119934130	119934323	(122259206)	+	MIR	SINE/MIR	1	253	(9)	2086177
398	25.0	18.4	0.6	chr2	120517245	120517405	(121676124)	C	MIRb	SINE/MIR	(70)	198	3	2087103
606	30.8	0.6	0.6	chr2	120517476	120517658	(121675871)	C	L3	LINE/CR1	(1430)	2669	2487	2087099
398	25.0	4.3	2.2	chr2	120517768	120517902	(121675627)	C	MER124	DNA?	(237)	160	23	2087104
256	26.4	2.7	1.4	chr2	121756187	121756259	(120437270)	+	L2a	LINE/L2	2834	2907	(512)	2089280
288	34.7	4.5	3.4	chr2	122680912	122681087	(119512442)	+	MER5B	DNA/hAT-Charlie	1	178	(0)	2090762
2437	11.3	0.6	0.3	chr2	122681170	122681523	(119512006)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2090763
554	31.6	10.4	0.0	chr2	123142769	123142958	(119050571)	+	MIR	SINE/MIR	32	243	(19)	2091392
2680	10.1	0.0	0.0	chr2	123142972	123143326	(119050203)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2091393
2747	9.3	0.0	0.0	chr2	126865518	126865872	(115327657)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2096535
14	9.1	5.1	4.9	chr2	127701853	127701891	(114491638)	+	(GCGCTG)n	Simple_repeat	1	41	(0)	2097840
3098	8.9	0.7	2.8	chr2	127926297	127926694	(114266835)	C	MSTA	LTR/ERVL-MaLR	(38)	390	1	2098285
14	0.0	7.4	3.5	chr2	128027098	128027124	(114166405)	+	(CCGC)n	Simple_repeat	1	29	(0)	2098506
14	24.6	5.1	1.6	chr2	128027166	128027224	(114166305)	+	(CGG)n	Simple_repeat	1	62	(0)	2098507
183	34.4	17.0	2.0	chr2	133740927	133741125	(108452404)	+	L2	LINE/L2	2799	3033	(386)	2106384
2649	9.3	0.0	3.5	chr2	133741127	133741494	(108452035)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2106387
11307	8.8	0.3	0.1	chr2	133741503	133743074	(108450455)	C	THE1A-int	LTR/ERVL-MaLR	(5)	1575	1	2106387
2141	23.1	11.0	8.4	chr2	135451592	135452019	(106741510)	+	L1MEc	LINE/L1	832	1202	(5198)	2109024
2344	8.5	6.8	0.3	chr2	135452024	135452355	(106741174)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2109026
11598	8.8	1.8	0.0	chr2	135452356	135453904	(106739625)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	4	2109026
17	15.5	4.7	0.0	chr2	135531859	135531901	(106661628)	+	(GGCTGC)n	Simple_repeat	1	45	(0)	2109151
13	23.3	0.0	0.0	chr2	135532005	135532039	(106661490)	+	(GCT)n	Simple_repeat	1	35	(0)	2109152
928	31.5	6.0	0.3	chr2	136275866	136276212	(105917317)	+	LTR16A	LTR/ERVL	84	451	(0)	2110426
671	27.9	7.7	4.4	chr2	136276274	136276322	(105917207)	+	MER102a	DNA/hAT-Charlie	4	59	(271)	2110427
2280	11.8	4.4	3.1	chr2	136276323	136276680	(105916849)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	2110428
2335	10.7	2.5	2.5	chr2	137297591	137297945	(104895584)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2111910
1526	16.0	11.7	1.5	chr2	138429000	138429335	(103764194)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2113415
18	6.1	0.0	9.5	chr2	138429336	138429348	(103764181)	+	(AACA)n	Simple_repeat	3	14	(0)	2113416
17	0.0	3.2	6.2	chr2	138501746	138501781	(103691748)	+	(GCC)n	Simple_repeat	1	34	(0)	2113519
15	21.8	4.8	3.1	chr2	138501781	138501842	(103691687)	+	(CGGAGC)n	Simple_repeat	1	65	(0)	2113520
18	25.0	3.2	1.5	chr2	138501836	138501898	(103691631)	+	(GCG)n	Simple_repeat	1	65	(0)	2113521
2043	21.2	6.0	4.8	chr2	139464627	139465122	(102728407)	+	MLT1D	LTR/ERVL-MaLR	1	502	(3)	2114863
11076	10.7	1.3	0.3	chr2	139959103	139960664	(102232865)	+	THE1A-int	LTR/ERVL-MaLR	2	1580	(0)	2115517
2744	7.1	0.6	0.6	chr2	139960665	139961019	(102232510)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2115517
687	25.3	7.5	3.9	chr2	139976925	139977093	(102216436)	+	L1M5	LINE/L1	5008	5192	(954)	2115532
1936	13.4	16.4	0.6	chr2	139977094	139977453	(102216076)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2115535
687	25.3	7.5	3.9	chr2	139977454	139977641	(102215888)	+	L1M5	LINE/L1	5193	5379	(767)	2115532
2506	10.3	1.1	0.0	chr2	142035776	142036125	(100157404)	+	THE1A	LTR/ERVL-MaLR	2	355	(0)	2118273
12	30.9	1.6	1.6	chr2	144516844	144516904	(97676625)	+	(CCGCCC)n	Simple_repeat	1	62	(0)	2121494
19	22.7	4.5	4.3	chr2	144516939	144517027	(97676502)	+	G-rich	Low_complexity	1	93	(0)	2121495
15	0.0	0.0	0.0	chr2	144517172	144517190	(97676339)	+	(CGC)n	Simple_repeat	1	19	(0)	2121496
1837	14.9	7.2	2.5	chr2	144991297	144991653	(97201876)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2122094
2671	6.8	0.8	0.6	chr2	146745350	146745703	(95447826)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2124283
1863	29.1	10.9	6.9	chr2	146745704	146746199	(95447330)	+	Charlie2b	DNA/hAT-Charlie	723	1267	(1515)	2124282
20	17.8	5.2	4.9	chr2	147844275	147844351	(94349178)	+	(CTCCG)n	Simple_repeat	1	81	(0)	2125790
34	5.3	0.0	0.0	chr2	147844401	147844440	(94349089)	+	(GCC)n	Simple_repeat	1	40	(0)	2125791
17	9.4	5.7	0.0	chr2	147844537	147844571	(94348958)	+	(GAGCCCG)n	Simple_repeat	1	37	(0)	2125792
36	19.1	3.3	1.1	chr2	147844582	147844672	(94348857)	+	(GCC)n	Simple_repeat	1	94	(0)	2125793
13	18.9	0.0	0.0	chr2	147844750	147844779	(94348750)	+	(GCC)n	Simple_repeat	1	30	(0)	2125794
14	9.0	4.9	7.0	chr2	147844870	147844910	(94348619)	+	(TTG)n	Simple_repeat	1	43	(0)	2125795
188	30.7	13.1	6.8	chr2	150128527	150128629	(92064900)	C	L2c	LINE/L2	(180)	3207	3110	2128931
2584	11.6	0.6	0.3	chr2	150128630	150128992	(92064537)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2128932
188	30.7	13.1	6.8	chr2	150128993	150129108	(92064421)	C	L2c	LINE/L2	(278)	3109	2972	2128931
2044	14.3	4.1	3.6	chr2	150572079	150572440	(91621089)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2129555
2695	8.2	0.6	0.0	chr2	151062440	151062792	(91130737)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2130265
2522	11.9	0.8	0.3	chr2	152231703	152232064	(89961465)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2132090
18	16.8	0.0	6.1	chr2	152335084	152335133	(89858396)	+	G-rich	Low_complexity	1	46	(0)	2132279
13	14.3	2.3	6.7	chr2	152335727	152335770	(89857759)	+	G-rich	Low_complexity	1	45	(0)	2132280
2156	12.5	6.9	2.6	chr2	152522471	152522816	(89670713)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	2132564
1936	14.6	8.0	0.6	chr2	152921252	152921589	(89271940)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	2133151
284	33.2	2.0	14.6	chr2	153978336	153978406	(88215123)	+	MIR	SINE/MIR	46	119	(143)	2134363
2714	7.7	0.3	0.0	chr2	153978407	153978758	(88214771)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	2134364
284	33.2	2.0	14.6	chr2	153978759	153978789	(88214740)	+	MIR	SINE/MIR	120	141	(121)	2134363
979	14.4	0.0	6.0	chr2	153978790	153978956	(88214573)	+	AluJr	SINE/Alu	137	293	(19)	2134365
284	33.2	2.0	14.6	chr2	153978957	153979078	(88214451)	+	MIR	SINE/MIR	142	242	(20)	2134363
1673	26.5	2.4	1.0	chr2	156114750	156115161	(86078368)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	131	2136986
1662	18.0	3.0	0.6	chr2	156115171	156115489	(86078040)	+	THE1D	LTR/ERVL-MaLR	55	381	(0)	2136987
1071	15.3	3.3	1.0	chr2	156115491	156115695	(86077834)	C	Tigger1a_Art	DNA/TcMar-Tigger	(0)	497	288	2136988
26	6.2	0.0	0.0	chr2	157875869	157875902	(84317627)	+	(GCGGG)n	Simple_repeat	1	34	(0)	2139334
23	32.0	0.0	2.2	chr2	157876292	157876383	(84317146)	+	GA-rich	Low_complexity	1	92	(0)	2139335
17	10.4	0.0	3.0	chr2	157876764	157876796	(84316733)	+	(GGGC)n	Simple_repeat	1	33	(0)	2139336
12171	8.2	0.9	0.1	chr2	158027088	158028655	(84164874)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2139610
2034	12.8	0.7	0.7	chr2	158028656	158028953	(84164576)	C	THE1A	LTR/ERVL-MaLR	(0)	355	58	2139610
2418	30.0	14.6	1.1	chr2	158236786	158238418	(83955111)	C	L2a	LINE/L2	(0)	3426	1527	2139888
1641	26.2	7.8	10.7	chr2	158286333	158286907	(83906622)	+	L1ME3B	LINE/L1	4482	5070	(1076)	2139954
2651	9.1	0.6	0.0	chr2	158286908	158287260	(83906269)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2139959
10493	10.3	3.1	0.1	chr2	158287261	158288792	(83904737)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2139959
2761	8.2	0.0	0.0	chr2	158288793	158289147	(83904382)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2139959
1961	12.5	7.7	3.7	chr2	158409762	158410110	(83783419)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2140110
2826	25.5	4.5	1.2	chr2	158410126	158411906	(83781623)	C	L1MA9	LINE/L1	(3765)	3396	1576	2140108
17	14.3	6.2	2.0	chr2	158456895	158456942	(83736587)	+	G-rich	Low_complexity	1	51	(0)	2140158
14	27.7	1.7	1.7	chr2	158457049	158457106	(83736423)	+	G-rich	Low_complexity	1	59	(0)	2140159
13354	12.4	3.0	6.5	chr2	158926360	158926571	(83266958)	C	L1MC1	LINE/L1	(1246)	4900	4706	2140814
1836	13.7	0.0	14.0	chr2	158926572	158926921	(83266608)	C	AluSq	SINE/Alu	(12)	301	1	2140819
13354	12.4	3.0	6.5	chr2	158926922	158926962	(83266567)	C	L1MC1	LINE/L1	(1441)	4705	4662	2140814
383	24.8	11.0	3.2	chr2	159290492	159290616	(82902913)	+	LTR86B1	LTR/ERVL	79	214	(273)	2141373
273	23.3	3.2	0.0	chr2	159290617	159290706	(82902823)	+	L1ME3A	LINE/L1	6080	6172	(1)	2141374
411	31.9	6.5	0.9	chr2	159290733	159290963	(82902566)	+	LTR86B1	LTR/ERVL	244	488	(5)	2141373
21	4.2	0.0	0.0	chr2	159712088	159712112	(82481417)	+	(A)n	Simple_repeat	1	25	(0)	2142018
12	16.9	2.9	2.8	chr2	159712267	159712301	(82481228)	+	(GCCA)n	Simple_repeat	1	36	(0)	2142019
12	16.6	4.5	4.3	chr2	160407690	160407733	(81785796)	+	(CTCCGC)n	Simple_repeat	1	46	(0)	2143038
17	21.5	0.0	3.9	chr2	160408042	160408093	(81785436)	+	G-rich	Low_complexity	1	52	(0)	2143039
3147	21.0	3.4	0.9	chr2	160804763	160805686	(81387843)	+	L1M4b	LINE/L1	2927	3792	(3214)	2143555
811	14.2	0.0	0.0	chr2	160805694	160805806	(81387723)	+	AluJb	SINE/Alu	2	114	(198)	2143567
1971	14.8	5.1	0.6	chr2	160805807	160806145	(81387384)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2143568
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
619	18.6	0.5	0.0	chr2	161281902	161282139	(80911390)	+	ACRO1	Satellite/acro	1	239	(5)	2144211
2219	11.7	1.4	1.4	chr2	161734208	161734562	(80458967)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2144788
456	33.1	0.6	1.8	chr2	163698041	163698209	(78495320)	+	MIRb	SINE/MIR	25	191	(77)	2147346
2103	11.9	5.2	3.9	chr2	165658565	165658923	(76534606)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2149966
628	33.0	9.9	7.4	chr2	165658924	165659548	(76533981)	C	L2b	LINE/L2	(378)	3041	2397	2149965
15	17.9	0.0	4.8	chr2	165794145	165794186	(76399343)	+	(CTCCGC)n	Simple_repeat	1	42	(0)	2150134
36	0.0	0.0	0.0	chr2	165953652	165953685	(76239844)	+	(CCCGCTCA)n	Simple_repeat	1	34	(0)	2150388
11466	9.9	1.1	0.1	chr2	165967262	165968825	(76224704)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2150405
2533	10.5	0.3	0.0	chr2	165968827	165969179	(76224350)	+	THE1A	LTR/ERVL-MaLR	2	355	(0)	2150405
19	9.8	0.0	2.9	chr2	166376052	166376086	(75817443)	+	(CCCT)n	Simple_repeat	1	35	(0)	2150940
2598	8.5	0.6	0.8	chr2	166721808	166722163	(75471366)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2151340
14	30.3	3.8	2.4	chr2	167293036	167293115	(74900414)	+	(TGC)n	Simple_repeat	1	83	(0)	2152028
23	21.9	1.7	0.0	chr2	167293086	167293143	(74900386)	+	(CGC)n	Simple_repeat	1	59	(0)	2152029
30	0.0	0.0	0.0	chr2	168247287	168247314	(73946215)	+	(GCCGGG)n	Simple_repeat	1	28	(0)	2153272
26	25.8	0.0	0.0	chr2	168247320	168247388	(73946141)	+	(GCC)n	Simple_repeat	1	69	(0)	2153273
24	17.2	0.0	6.1	chr2	168247506	168247571	(73945958)	+	(CGC)n	Simple_repeat	1	66	(0)	2153274
17	26.2	4.0	2.5	chr2	168247582	168247671	(73945858)	+	GA-rich	Low_complexity	1	91	(0)	2153275
17	11.3	2.4	4.7	chr2	168247729	168247770	(73945759)	+	(CCGCTC)n	Simple_repeat	1	43	(0)	2153276
14	13.1	9.5	0.0	chr2	168456095	168456136	(73737393)	+	(TGCGCCC)n	Simple_repeat	1	46	(0)	2153583
28	14.8	0.0	1.9	chr2	168456296	168456349	(73737180)	+	(GCG)n	Simple_repeat	1	54	(0)	2153584
12	25.1	1.8	5.2	chr2	168559837	168559893	(73633636)	+	A-rich	Low_complexity	1	58	(0)	2153744
1880	14.4	10.2	1.5	chr2	168559995	168560326	(73633203)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2153745
336	27.4	7.4	0.0	chr2	168560350	168560462	(73633067)	C	MIRc	SINE/MIR	(39)	229	108	2153746
2121	9.9	6.8	1.1	chr2	168977597	168977955	(73215574)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2154345
12289	8.8	0.5	6.9	chr2	169687216	169688904	(72504625)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2155420
2818	8.6	1.4	0.0	chr2	169688905	169689254	(72504275)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2155420
4690	15.3	6.1	4.1	chr2	169689255	169689994	(72503535)	C	L1MB7	LINE/L1	(1635)	5009	4239	2155415
20	24.4	1.4	6.0	chr2	169734378	169734473	(72459056)	+	G-rich	Low_complexity	1	91	(0)	2155496
2874	10.8	2.1	0.5	chr2	169797488	169797595	(72395934)	+	LTR23	LTR/ERV1	1	108	(329)	2155626
1794	15.0	9.6	3.4	chr2	169797596	169797946	(72395583)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2155627
2874	10.8	2.1	0.5	chr2	169797947	169798267	(72395262)	+	LTR23	LTR/ERV1	109	437	(0)	2155626
13	13.1	13.3	1.5	chr2	169824904	169824963	(72368566)	+	(GCGCGCAC)n	Simple_repeat	1	68	(0)	2155676
21	19.6	2.5	6.2	chr2	171160204	171160282	(71033247)	+	G-rich	Low_complexity	1	81	(0)	2157910
15	27.3	5.2	3.9	chr2	171160560	171160656	(71032873)	+	G-rich	Low_complexity	1	102	(0)	2157911
16	22.6	1.8	3.6	chr2	171160827	171160881	(71032648)	+	(CGG)n	Simple_repeat	1	56	(0)	2157912
30	5.6	0.0	0.0	chr2	171160967	171161003	(71032526)	+	(GCG)n	Simple_repeat	1	37	(0)	2157913
10671	10.0	3.4	3.6	chr2	171423289	171424872	(70768657)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2158412
1671	9.4	5.5	0.0	chr2	172164849	172165071	(70028458)	+	THE1A	LTR/ERVL-MaLR	1	236	(119)	2159733
384	6.7	0.0	0.0	chr2	172165278	172165322	(70028207)	C	LTR7	LTR/ERV1	(0)	450	406	2159734
2865	7.3	0.0	0.0	chr2	172168764	172169118	(70024411)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2159733
2024	15.1	0.8	2.5	chr2	172885442	172885802	(69307727)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2160834
343	27.8	8.6	10.4	chr2	173076036	173076236	(69117293)	C	L1M4b	LINE/L1	(6211)	656	460	2161104
1959	15.3	3.7	3.4	chr2	173604336	173604687	(68588842)	C	THE1B	LTR/ERVL-MaLR	(10)	354	2	2161912
19	25.0	1.2	5.8	chr2	173963715	173963799	(68229730)	+	(GGCGGC)n	Simple_repeat	1	86	(0)	2162453
28	0.0	0.0	0.0	chr2	173964014	173964039	(68229490)	+	(CTC)n	Simple_repeat	1	26	(0)	2162454
12	10.3	6.1	2.9	chr2	173964100	173964132	(68229397)	+	(GCGG)n	Simple_repeat	1	35	(0)	2162455
34	27.1	0.8	2.5	chr2	173964209	173964388	(68229141)	+	G-rich	Low_complexity	1	176	(0)	2162456
30	27.0	2.1	1.0	chr2	173964409	173964502	(68229027)	+	(GCC)n	Simple_repeat	1	96	(0)	2162457
15	28.4	0.0	0.0	chr2	173964569	173964615	(68228914)	+	G-rich	Low_complexity	1	47	(0)	2162458
18	0.0	0.0	0.0	chr2	173964685	173964706	(68228823)	+	(CGG)n	Simple_repeat	1	22	(0)	2162459
461	31.6	3.9	4.4	chr2	174039524	174039728	(68153801)	C	MIRc	SINE/MIR	(39)	229	26	2162612
323	30.5	2.3	0.8	chr2	174040167	174040295	(68153234)	+	L1M5	LINE/L1	4951	5081	(1065)	2162613
14	15.0	5.4	0.0	chr2	174248642	174248678	(67944851)	+	(GCCCC)n	Simple_repeat	1	39	(0)	2162948
14	30.7	0.0	0.0	chr2	174336420	174336467	(67857062)	+	(CGG)n	Simple_repeat	1	48	(0)	2163102
18	31.8	0.0	0.0	chr2	174336898	174336959	(67856570)	+	(CGC)n	Simple_repeat	1	62	(0)	2163103
23	15.6	3.2	4.6	chr2	175005224	175005286	(67188243)	+	(GGC)n	Simple_repeat	1	65	(0)	2164159
287	20.5	8.2	1.3	chr2	175458935	175459013	(66734516)	+	MamGypLTR1b	LTR/Gypsy	641	725	(57)	2164833
20	15.1	2.2	2.1	chr2	176080615	176080660	(66112869)	+	(GCC)n	Simple_repeat	1	47	(0)	2165642
18	28.0	2.9	4.7	chr2	176092724	176092826	(66100703)	+	GA-rich	Low_complexity	1	106	(0)	2165652
25	15.8	6.9	1.3	chr2	176092850	176092924	(66100605)	+	G-rich	Low_complexity	1	79	(0)	2165653
13	5.3	0.0	0.0	chr2	176092979	176092998	(66100531)	+	(CGG)n	Simple_repeat	1	20	(0)	2165654
36	4.9	0.0	0.0	chr2	176093058	176093099	(66100430)	+	(GGC)n	Simple_repeat	1	42	(0)	2165655
234	21.9	14.0	0.0	chr2	176269793	176269871	(65923658)	C	MIR1_Amn	SINE/MIR	(98)	170	83	2165875
12337	9.6	0.8	0.2	chr2	176772318	176773888	(65419641)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2166612
2387	13.5	4.1	1.4	chr2	176773889	176774242	(65419287)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2166612
30	17.0	4.0	1.3	chr2	177264625	177264698	(64928831)	+	(CGG)n	Simple_repeat	1	77	(0)	2167361
14	25.2	5.0	3.6	chr2	177392828	177392907	(64800622)	+	G-rich	Low_complexity	1	84	(0)	2167595
268	28.0	7.2	10.3	chr2	177763804	177764006	(64429523)	C	MER91A	DNA/hAT-Tip100	(0)	196	1	2168057
2268	12.0	0.0	0.0	chr2	179928736	179929036	(62264493)	C	AluSc5	SINE/Alu	(8)	301	1	2170829
2588	9.0	0.3	2.8	chr2	179929037	179929272	(62264257)	C	THE1A	LTR/ERVL-MaLR	(120)	235	1	2170828
11515	9.6	0.8	0.4	chr2	179929273	179930846	(62262683)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2170828
16128	17.8	5.9	4.6	chr2	180032933	180035021	(62158508)	C	L1MA2	LINE/L1	(2452)	2146	9	2170972
13	16.2	0.0	0.0	chr2	181656652	181656679	(60536850)	+	G-rich	Low_complexity	1	28	(0)	2172979
17	18.6	3.3	4.8	chr2	181891634	181891693	(60301836)	+	(GCCGC)n	Simple_repeat	1	62	(0)	2173261
26	13.6	5.8	2.7	chr2	181891874	181891942	(60301587)	+	(CCTCCT)n	Simple_repeat	1	73	(0)	2173262
25	26.4	0.0	4.4	chr2	181891943	181891962	(60301567)	+	(CCCTCC)n	Simple_repeat	2	90	(0)	2173263
21	8.9	0.0	2.6	chr2	181892203	181892211	(60301318)	+	(CGAGGA)n	Simple_repeat	1	37	(0)	2173264
18	7.6	0.0	0.0	chr2	181892212	181892239	(60301290)	+	(AGG)n	Simple_repeat	1	28	(0)	2173265
293	25.8	8.8	3.7	chr2	181949191	181949351	(60244178)	C	MLT1K	LTR/ERVL-MaLR	(35)	560	391	2173327
1704	15.4	2.3	1.0	chr2	181949409	181949703	(60243826)	C	MSTA	LTR/ERVL-MaLR	(129)	299	1	2173328
10491	10.3	1.5	6.0	chr2	182392475	182394130	(59799399)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2173888
2380	12.6	0.0	3.2	chr2	182394131	182394506	(59799023)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2173888
25975	10.3	3.6	2.5	chr2	182394507	182396445	(59797084)	+	HERVL-int	LTR/ERVL	1895	3905	(1749)	2173887
14	30.1	1.6	1.6	chr2	182716123	182716185	(59477344)	+	(CGCCAC)n	Simple_repeat	1	64	(0)	2174385
16	21.3	4.1	5.3	chr2	182916056	182916128	(59277401)	+	(TCCTC)n	Simple_repeat	1	76	(0)	2174621
20	0.0	0.0	0.0	chr2	182916170	182916191	(59277338)	+	(A)n	Simple_repeat	1	22	(0)	2174622
431	30.9	13.4	2.4	chr2	182916424	182916728	(59276801)	C	L2c	LINE/L2	(54)	3333	2995	2174623
12	19.7	4.7	2.2	chr2	183037942	183037984	(59155545)	+	(CCCGC)n	Simple_repeat	1	45	(0)	2174822
19	23.7	2.5	4.8	chr2	183038303	183038383	(59155146)	+	(CAGCCCC)n	Simple_repeat	1	83	(0)	2174823
26	0.0	0.0	0.0	chr2	183038418	183038442	(59155087)	+	(GGC)n	Simple_repeat	1	25	(0)	2174824
16	15.2	2.0	6.0	chr2	183038554	183038602	(59154927)	+	(GGCCCT)n	Simple_repeat	1	50	(0)	2174825
17106	17.5	5.0	1.8	chr2	183707564	183707704	(58485825)	C	L1M1	LINE/L1	(4046)	3519	3369	2175700
2003	15.5	3.6	3.1	chr2	183707705	183708064	(58485465)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	2175701
18	22.9	5.9	1.4	chr2	184598561	184598628	(57594901)	+	(GCC)n	Simple_repeat	1	72	(0)	2176765
1367	23.4	14.2	2.7	chr2	185205447	185205483	(56988046)	+	MLT2B1	LTR/ERVL	2	34	(486)	2177493
2203	11.1	6.3	0.0	chr2	185205484	185205824	(56987705)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2177494
1367	23.4	14.2	2.7	chr2	185205825	185206190	(56987339)	+	MLT2B1	LTR/ERVL	35	458	(62)	2177493
10684	10.4	1.1	2.3	chr2	185524252	185524566	(56668963)	+	THE1A-int	LTR/ERVL-MaLR	1283	1580	(0)	2177912
2418	10.5	0.8	0.0	chr2	185524567	185524918	(56668611)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2177912
57	20.5	2.7	4.7	chr2	185524919	185525092	(56668437)	+	(ATATCT)n	Simple_repeat	1	170	(0)	2177914
2037	14.3	4.1	2.2	chr2	187296195	187296551	(54896978)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2180217
9641	13.9	2.4	3.8	chr2	188019577	188020751	(54172778)	+	THE1D-int	LTR/ERVL-MaLR	375	1580	(0)	2181128
1643	14.0	11.8	3.6	chr2	188044555	188044887	(54148642)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2181152
13	14.0	4.7	4.4	chr2	189580477	189580519	(52613010)	+	(GCTGCT)n	Simple_repeat	1	45	(0)	2183042
17	0.0	0.0	0.0	chr2	189580770	189580790	(52612739)	+	(CCG)n	Simple_repeat	1	21	(0)	2183043
11326	17.0	2.6	2.0	chr2	190013816	190014188	(52179341)	C	L1MA7	LINE/L1	(2889)	4673	4306	2183705
1904	16.5	3.1	1.6	chr2	190014189	190014563	(52178966)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2183710
9725	13.5	3.1	2.5	chr2	190014564	190016181	(52177348)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	4	2183710
14	14.2	3.2	0.0	chr2	190343878	190343908	(51849621)	+	(CCT)n	Simple_repeat	1	32	(0)	2184207
11	24.0	4.5	0.0	chr2	190344130	190344173	(51849356)	+	(GGCCCC)n	Simple_repeat	1	46	(0)	2184208
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
339	27.0	13.9	10.2	chr2	191245109	191245343	(50948186)	+	L1M4b	LINE/L1	411	655	(6212)	2185587
2196	13.4	1.1	1.1	chr2	192484060	192484413	(49709116)	+	THE1A	LTR/ERVL-MaLR	1	354	(1)	2187293
10506	11.4	1.8	2.3	chr2	192484415	192486003	(49707526)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2187293
2242	12.3	1.1	0.8	chr2	192486005	192486356	(49707173)	+	THE1A	LTR/ERVL-MaLR	3	355	(0)	2187293
2580	10.2	0.3	0.3	chr2	193007219	193007573	(49185956)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2187933
986	13.4	2.6	0.5	chr2	194003293	194003479	(48190050)	+	L1MA9	LINE/L1	6102	6292	(20)	2189148
1688	13.0	1.5	0.4	chr2	194003494	194003756	(48189773)	C	THE1A	LTR/ERVL-MaLR	(0)	355	90	2189149
2371	11.4	0.8	1.1	chr2	196082510	196082865	(46110664)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2191868
11036	10.8	1.4	0.3	chr2	196082866	196084426	(46109103)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2191868
13	13.2	6.7	4.2	chr2	196593438	196593482	(45600047)	+	(CCGCGGTG)n	Simple_repeat	1	48	(0)	2192634
13	25.0	2.0	2.0	chr2	196593698	196593746	(45599783)	+	(GGCTGA)n	Simple_repeat	1	50	(0)	2192635
23	21.9	0.0	0.0	chr2	196926620	196926672	(45266857)	+	(GCC)n	Simple_repeat	1	53	(0)	2193088
13	15.0	9.1	3.3	chr2	196926746	196926800	(45266729)	+	(GCGCCT)n	Simple_repeat	1	60	(0)	2193089
13	0.0	0.0	0.0	chr2	197804607	197804623	(44388906)	+	(GCC)n	Simple_repeat	1	17	(0)	2194616
28	6.1	0.0	0.0	chr2	197804943	197804977	(44388552)	+	(GCC)n	Simple_repeat	1	35	(0)	2194617
2308	11.3	5.1	0.0	chr2	199237648	199237984	(42955545)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2196578
4199	23.6	7.7	2.7	chr2	199237989	199239613	(42953916)	C	L1MC2	LINE/L1	(4209)	2542	744	2196574
14	24.0	6.1	1.4	chr2	199458317	199458382	(42735147)	+	GA-rich	Low_complexity	1	70	(0)	2196848
15	9.4	5.6	2.6	chr2	199659288	199659323	(42534206)	+	(CCGAG)n	Simple_repeat	1	38	(0)	2197159
18	12.2	6.4	2.0	chr2	199911313	199911359	(42282170)	+	(CGCCGGC)n	Simple_repeat	1	50	(0)	2197519
13	29.3	0.0	0.0	chr2	199911453	199911494	(42282035)	+	(GCT)n	Simple_repeat	1	42	(0)	2197520
315	25.4	6.3	8.5	chr2	199955997	199956125	(42237404)	+	L1MDb	LINE/L1	649	774	(5635)	2197597
1263	8.9	0.0	0.0	chr2	200126770	200126938	(42066591)	C	THE1B	LTR/ERVL-MaLR	(0)	364	196	2197860
858	14.1	0.8	3.0	chr2	200126974	200127108	(42066421)	C	FLAM_C	SINE/Alu	(11)	132	1	2197863
2480	7.0	0.7	0.0	chr2	200887776	200888074	(41305455)	+	AluSx1	SINE/Alu	2	302	(10)	2199068
544	31.8	11.0	1.6	chr2	200888139	200888442	(41305087)	+	L2a	LINE/L2	2950	3285	(141)	2199069
17	23.1	0.0	3.7	chr2	201116576	201116629	(41076900)	+	(GCCCC)n	Simple_repeat	1	54	(0)	2199569
1808	9.8	0.4	0.4	chr2	201201916	201202150	(40991379)	C	AluSx	SINE/Alu	(77)	235	1	2199732
17	4.2	0.0	0.0	chr2	201202311	201202335	(40991194)	+	(CATT)n	Simple_repeat	1	25	(0)	2199733
11	19.5	2.1	6.2	chr2	201451779	201451825	(40741704)	+	(GCCCCGC)n	Simple_repeat	1	48	(0)	2200074
1136	14.9	14.3	1.6	chr2	201828695	201829061	(40364468)	C	MER21B	LTR/ERVL	(453)	415	1	2200666
28	0.0	0.0	3.2	chr2	202033874	202033904	(40159625)	+	(CGG)n	Simple_repeat	1	31	(0)	2201079
24	24.3	1.8	6.3	chr2	202034104	202034219	(40159310)	+	(GCG)n	Simple_repeat	1	110	(0)	2201080
16	22.1	8.0	1.2	chr2	202376124	202376198	(39817331)	+	(CGGCGC)n	Simple_repeat	1	81	(0)	2201854
22	3.5	0.0	0.0	chr2	202376172	202376200	(39817329)	+	(CCG)n	Simple_repeat	1	29	(0)	2201855
18	29.1	1.4	2.7	chr2	202376240	202376327	(39817202)	+	(GGC)n	Simple_repeat	1	86	(0)	2201856
14	27.5	2.5	4.8	chr2	202376396	202376476	(39817053)	+	(CGCCGCC)n	Simple_repeat	1	83	(0)	2201857
39	0.0	0.0	0.0	chr2	202376512	202376547	(39816982)	+	(GGC)n	Simple_repeat	1	36	(0)	2201858
12033	8.8	0.3	0.5	chr2	203503606	203505178	(38688351)	C	THE1A-int	LTR/ERVL-MaLR	(9)	1571	1	2204097
2836	8.2	0.6	0.0	chr2	203505179	203505531	(38687998)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2204097
12	20.8	4.3	2.1	chr2	203534996	203535041	(38658488)	+	(GGAGGCG)n	Simple_repeat	1	48	(0)	2204167
46	0.0	0.0	0.0	chr2	203535259	203535300	(38658229)	+	(TGAC)n	Simple_repeat	1	42	(0)	2204168
33	12.7	1.6	1.6	chr2	203535304	203535365	(38658164)	+	(GGC)n	Simple_repeat	1	63	(0)	2204169
31	25.4	4.6	2.2	chr2	203535450	203535580	(38657949)	+	(CCGCCCG)n	Simple_repeat	1	137	(0)	2204170
190	30.2	1.1	7.5	chr2	204544937	204545029	(37648500)	+	MIR3	SINE/MIR	120	206	(2)	2205784
15	14.3	0.0	3.0	chr2	204545554	204545586	(37647943)	+	(CGC)n	Simple_repeat	1	33	(0)	2205785
29	7.2	2.3	0.0	chr2	204545612	204545655	(37647874)	+	(GCCAGG)n	Simple_repeat	1	45	(0)	2205786
326	23.5	13.1	4.0	chr2	204545685	204545808	(37647721)	C	L1MDb	LINE/L1	(5718)	691	555	2205787
13	26.8	1.6	4.7	chr2	205682309	205682371	(36511158)	+	(GCCGC)n	Simple_repeat	1	64	(0)	2207282
21	19.8	0.0	0.0	chr2	205682634	205682679	(36510850)	+	(CAG)n	Simple_repeat	1	46	(0)	2207283
16	8.7	0.0	0.0	chr2	205682922	205682946	(36510583)	+	(ATT)n	Simple_repeat	1	25	(0)	2207284
15	21.0	3.9	1.9	chr2	206085225	206085275	(36108254)	+	(CCCGG)n	Simple_repeat	1	53	(0)	2207943
15	10.9	4.4	6.4	chr2	206085808	206085852	(36107677)	+	(GCCC)n	Simple_repeat	1	47	(0)	2207944
14	18.8	0.0	0.0	chr2	206274569	206274599	(35918930)	+	G-rich	Low_complexity	1	31	(0)	2208373
14	15.8	4.3	4.2	chr2	206274955	206275000	(35918529)	+	G-rich	Low_complexity	1	48	(0)	2208374
19	17.4	2.1	2.1	chr2	206443376	206443422	(35750107)	+	(GCA)n	Simple_repeat	1	48	(0)	2208642
29	7.8	0.0	0.0	chr2	206443708	206443748	(35749781)	+	(AGCCCCG)n	Simple_repeat	1	41	(0)	2208643
2830	11.1	0.0	0.3	chr2	206484734	206485095	(35708434)	+	THE1B	LTR/ERVL-MaLR	1	361	(3)	2208694
245	27.9	8.5	0.0	chr2	207792153	207792238	(34401291)	C	MIRc	SINE/MIR	(141)	127	34	2210702
22	19.0	0.0	0.0	chr2	207792271	207792312	(34401217)	+	(C)n	Simple_repeat	1	42	(0)	2210703
262	34.0	7.7	1.4	chr2	207792551	207792696	(34400833)	C	MIR3	SINE/MIR	(38)	170	15	2210704
1773	13.6	1.7	6.7	chr2	208255695	208256010	(33937519)	C	AluJb	SINE/Alu	(10)	302	3	2211598
14	13.2	2.9	2.8	chr2	209771905	209771939	(32421590)	+	G-rich	Low_complexity	1	36	(0)	2213450
18	23.3	2.0	0.0	chr2	209772220	209772269	(32421260)	+	(GCC)n	Simple_repeat	1	51	(0)	2213451
11984	8.4	0.2	0.4	chr2	209794921	209796502	(32397027)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2213494
2557	9.6	0.3	1.9	chr2	209796503	209796863	(32396666)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2213494
1693	17.3	3.1	4.1	chr2	209796864	209797180	(32396349)	C	L1MB7	LINE/L1	(71)	6113	5799	2213493
1299	26.7	11.6	2.7	chr2	211091974	211092451	(31101078)	+	MLT1H	LTR/ERVL-MaLR	4	529	(20)	2215139
1655	25.1	16.4	3.6	chr2	211099903	211100254	(31093275)	+	L1M5	LINE/L1	4182	4550	(1596)	2215152
1801	16.4	7.5	0.6	chr2	211100255	211100603	(31092926)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2215153
183	39.9	6.3	0.6	chr2	212332042	212332056	(29861473)	C	L3b	LINE/CR1	(262)	4970	4956	2216804
1853	14.2	5.2	6.8	chr2	212332057	212332426	(29861103)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2216805
183	39.9	6.3	0.6	chr2	212332427	212332574	(29860955)	C	L3b	LINE/CR1	(277)	4955	4798	2216804
1214	11.2	1.2	0.1	chr2	213914717	213914932	(28278597)	C	L1ME3F	LINE/L1	(728)	5426	5207	2218865
1362	11.1	0.5	0.0	chr2	213914933	213915122	(28278407)	C	THE1B	LTR/ERVL-MaLR	(0)	364	174	2218874
6851	6.8	1.6	0.0	chr2	213915130	213916562	(28276967)	C	L1PA7	LINE/L1	(0)	6154	4705	2218875
28	18.0	3.3	8.7	chr2	216633464	216633593	(25559936)	+	(CCG)n	Simple_repeat	1	122	(0)	2223158
26	16.8	0.0	0.0	chr2	216633550	216633598	(25559931)	+	(GCT)n	Simple_repeat	1	49	(0)	2223159
18	26.0	3.7	2.4	chr2	216633599	216633629	(25559900)	+	(CGCGGC)n	Simple_repeat	2	84	(0)	2223160
182	29.7	1.1	7.1	chr2	218259747	218259844	(23933685)	C	L3b	LINE/CR1	(187)	5045	4954	2225742
457	26.7	12.2	4.1	chr2	218260130	218260324	(23933205)	C	MIR	SINE/MIR	(35)	227	15	2225743
12	20.6	2.4	2.4	chr2	218859460	218859500	(23334029)	+	(TCCTCTC)n	Simple_repeat	1	42	(0)	2226934
13	3.7	10.7	0.0	chr2	218859568	218859595	(23333934)	+	(GAGGC)n	Simple_repeat	1	31	(0)	2226935
16	4.1	4.0	0.0	chr2	218860067	218860091	(23333438)	+	(GCT)n	Simple_repeat	1	26	(0)	2226936
36	0.0	0.0	0.0	chr2	219627528	219627560	(22565969)	+	(CGG)n	Simple_repeat	1	33	(0)	2228241
2466	9.6	3.4	0.9	chr2	220055601	220055946	(22137583)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2228937
348	31.6	9.4	0.0	chr2	220277810	220278002	(21915527)	+	MIRc	SINE/MIR	26	238	(30)	2229311
9623	9.8	10.6	0.4	chr2	221056648	221058064	(21135465)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	2	2230468
2535	9.7	1.1	0.0	chr2	221058066	221058416	(21135113)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2230468
2025	15.4	3.3	2.8	chr2	221354892	221355251	(20838278)	C	THE1B	LTR/ERVL-MaLR	(0)	364	3	2230961
14	21.2	4.6	4.4	chr2	222860758	222860822	(19332707)	+	(CCCGCT)n	Simple_repeat	1	68	(0)	2233361
12	15.5	3.5	0.0	chr2	222860880	222860908	(19332621)	+	(CGCGC)n	Simple_repeat	1	30	(0)	2233362
2886	7.7	1.7	0.0	chr2	222961714	222962062	(19231467)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2233509
12559	7.8	3.0	0.0	chr2	222962063	222963595	(19229934)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2233509
12	26.4	2.1	2.0	chr2	224038839	224038886	(18154643)	+	(CCCGGCT)n	Simple_repeat	1	49	(0)	2235309
18	17.5	2.1	2.1	chr2	224039336	224039382	(18154147)	+	(CCCCG)n	Simple_repeat	1	48	(0)	2235310
1645	14.7	8.9	3.3	chr2	224850610	224850968	(17342561)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2236652
12	28.8	3.3	0.0	chr2	225967401	225967434	(16226095)	+	(TATATA)n	Simple_repeat	1	36	(0)	2238241
2489	7.9	4.2	0.0	chr2	225967435	225967774	(16225755)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2238242
12	28.8	3.3	0.0	chr2	225967775	225967799	(16225730)	+	(TATATA)n	Simple_repeat	1	25	(0)	2238243
2264	12.0	3.9	2.8	chr2	227216987	227217346	(14976183)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2240093
17	13.6	4.8	2.3	chr2	229714353	229714394	(12479135)	+	(AGC)n	Simple_repeat	1	44	(0)	2243976
27	0.0	2.6	5.0	chr2	229714596	229714634	(12478895)	+	(GCGGG)n	Simple_repeat	1	40	(0)	2243977
200	21.0	0.0	15.1	chr2	230498932	230499004	(11694525)	+	MIR3	SINE/MIR	122	183	(25)	2245207
26	21.8	7.8	0.9	chr2	230712975	230713077	(11480452)	+	(CCGCAG)n	Simple_repeat	1	111	(0)	2245575
13	16.0	2.0	8.0	chr2	230713514	230713562	(11479967)	+	(GGCG)n	Simple_repeat	1	50	(0)	2245576
385	34.4	11.4	4.1	chr2	230713792	230714179	(11479350)	C	L2c	LINE/L2	(52)	3335	2916	2245577
1574	14.9	1.3	12.4	chr2	231126121	231126468	(11067061)	+	AluJb	SINE/Alu	1	309	(3)	2246251
21150	5.3	0.9	0.0	chr2	231405686	231408345	(10785184)	+	HERVE-int	LTR/ERV1	5129	7812	(1)	2246797
263	32.1	9.3	6.6	chr2	231961034	231961334	(10232195)	+	L2c	LINE/L2	3034	3386	(1)	2247971
2168	21.4	7.3	3.8	chr2	231968395	231968792	(10224737)	C	L1ME1	LINE/L1	(207)	6363	5964	2247980
2888	21.6	8.6	5.9	chr2	231968791	231968829	(10224700)	C	L1ME1	LINE/L1	(1717)	4820	4781	2247980
1827	14.4	10.8	2.9	chr2	231968830	231969179	(10224350)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2247982
2888	21.6	8.6	5.9	chr2	231969180	231969309	(10224220)	C	L1ME1	LINE/L1	(1757)	4780	4656	2247980
16	17.7	3.5	5.1	chr2	232487522	232487578	(9705951)	+	(CGAGCCC)n	Simple_repeat	1	59	(0)	2248732
33	2.9	0.0	0.0	chr2	232487582	232487616	(9705913)	+	(AGCCGC)n	Simple_repeat	1	35	(0)	2248733
16	26.9	0.0	0.0	chr2	232487653	232487697	(9705832)	+	(GGC)n	Simple_repeat	1	45	(0)	2248734
399	20.1	3.2	1.1	chr2	232551134	232551224	(9642305)	+	MIRb	SINE/MIR	104	202	(66)	2248838
13	27.2	3.1	3.0	chr2	232633534	232633598	(9559931)	+	(CCGC)n	Simple_repeat	1	67	(0)	2249014
21	12.8	6.2	4.3	chr2	232633636	232633700	(9559829)	+	(CGCGTCC)n	Simple_repeat	1	69	(0)	2249015
21	18.8	3.3	7.5	chr2	232633795	232633885	(9559644)	+	(GCCCGA)n	Simple_repeat	1	94	(0)	2249016
1394	13.7	3.8	10.5	chr2	233351133	233351300	(8842229)	C	L1MC3	LINE/L1	(0)	7785	7639	2250385
3508	19.1	1.1	6.7	chr2	235173141	235173737	(7019792)	C	L1MB2	LINE/L1	(229)	5942	5350	2253153
2376	11.4	0.8	0.8	chr2	235306472	235306826	(6886703)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2253366
2319	12.3	1.4	3.0	chr2	235456721	235457089	(6736440)	+	THE1B	LTR/ERVL-MaLR	2	364	(0)	2253654
27	19.5	1.5	1.5	chr2	236167745	236167810	(6025719)	+	(GGC)n	Simple_repeat	1	67	(0)	2254615
1778	11.8	12.9	1.5	chr2	236435438	236435773	(5757756)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	2254991
1036	20.4	1.8	4.8	chr2	236435774	236435876	(5757653)	+	MER58A	DNA/hAT-Charlie	122	224	(0)	2254990
2162	12.8	0.9	0.6	chr2	236787417	236787747	(5405782)	+	THE1A	LTR/ERVL-MaLR	1	332	(23)	2255499
2223	19.8	8.0	1.2	chr2	236864069	236864430	(5329099)	+	MLT2B2	LTR/ERVL	1	402	(113)	2255609
2331	11.3	2.8	0.9	chr2	236864431	236864778	(5328751)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2255610
11635	9.4	2.3	0.2	chr2	237302784	237304329	(4889200)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2256205
2590	9.3	0.3	2.2	chr2	237304330	237304691	(4888838)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2256205
1612	32.9	4.9	6.1	chr2	237304692	237305536	(4887993)	C	ERVL-E-int	LTR/ERVL	(283)	5384	4535	2256204
2377	11.4	3.6	3.8	chr2	239935579	239935943	(2257586)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2259490
2218	14.5	3.3	2.8	chr2	240172891	240173252	(2020277)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2259773
2581	11.0	2.8	0.8	chr2	240187972	240188328	(2005201)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2259790
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
11	25.3	0.0	5.8	chr2	241272596	241272647	(920882)	+	G-rich	Low_complexity	1	52	(0)	2260900
29	14.1	1.5	4.3	chr2	241272677	241272744	(920785)	+	(CCGC)n	Simple_repeat	1	69	(0)	2260901
2684	9.1	0.8	0.6	chr2	241972277	241972639	(220890)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2261910
14	8.5	4.7	6.7	chr20	297647	297689	(64146478)	+	(CCCGGCGG)n	Simple_repeat	1	45	(0)	2262587
14	35.9	0.0	0.0	chr20	653096	653162	(63791005)	+	(GCCCG)n	Simple_repeat	1	67	(0)	2263435
13	14.8	4.0	10.4	chr20	653483	653556	(63790611)	+	G-rich	Low_complexity	1	77	(0)	2263436
678	21.8	4.4	6.6	chr20	1118101	1118311	(63325856)	+	MIR	SINE/MIR	35	240	(22)	2264467
319	20.3	0.0	0.0	chr20	1392496	1392574	(63051593)	+	MIRc	SINE/MIR	83	161	(101)	2264922
22	26.3	2.2	7.2	chr20	1392659	1392825	(63051342)	+	G-rich	Low_complexity	1	158	(0)	2264923
13	19.9	2.3	4.4	chr20	1392999	1393042	(63051125)	+	(GGC)n	Simple_repeat	1	45	(0)	2264924
16	26.7	2.9	4.3	chr20	1393093	1393160	(63051007)	+	(GC)n	Simple_repeat	1	70	(0)	2264925
183	26.0	4.0	2.7	chr20	2688576	2688650	(61755517)	+	L2c	LINE/L2	3271	3346	(41)	2267435
30	22.7	3.2	4.7	chr20	3407640	3407762	(61036405)	+	(GGCGCG)n	Simple_repeat	1	127	(0)	2268792
20	22.1	0.0	0.0	chr20	4687236	4687283	(59756884)	+	G-rich	Low_complexity	1	48	(0)	2271155
13	26.9	2.0	1.9	chr20	5126688	5126738	(59317429)	+	(CGCTC)n	Simple_repeat	1	52	(0)	2272075
2245	10.7	4.8	0.9	chr20	6590393	6590733	(57853434)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2274618
3105	19.0	2.8	3.2	chr20	8407192	8407364	(56036803)	+	L1MC3	LINE/L1	7060	7239	(546)	2277201
2643	9.6	0.3	0.0	chr20	8407365	8407718	(56036449)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2277202
3105	19.0	2.8	3.2	chr20	8407719	8408238	(56035929)	+	L1MC3	LINE/L1	7240	7750	(35)	2277201
83	2.5	0.0	0.0	chr20	10034876	10034957	(54409210)	+	(GGCGGA)n	Simple_repeat	1	82	(0)	2279873
24	27.4	2.1	3.1	chr20	10673536	10673629	(53770538)	+	(CGC)n	Simple_repeat	1	96	(0)	2280873
2286	9.9	3.7	1.2	chr20	11595468	11595813	(52848354)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2282213
11665	9.2	0.5	0.2	chr20	11595814	11597389	(52846778)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2282213
2808	7.3	0.3	0.0	chr20	12890970	12891323	(51552844)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2284045
460	32.2	7.6	4.5	chr20	15586683	15587040	(48857127)	+	L1M5	LINE/L1	4233	4602	(1544)	2288103
2572	8.9	1.4	0.0	chr20	15587044	15587393	(48856774)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2288104
25	21.0	0.0	4.2	chr20	17682473	17682543	(46761624)	+	G-rich	Low_complexity	1	71	(0)	2291262
13	11.2	14.6	0.0	chr20	18138192	18138239	(46305928)	+	(TGCGGC)n	Simple_repeat	1	55	(0)	2292194
259	37.6	1.5	0.8	chr20	20217946	20218079	(44226088)	+	L2c	LINE/L2	3031	3165	(222)	2295342
2832	8.5	0.3	2.5	chr20	20218129	20218491	(44225676)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2295343
661	23.6	0.7	0.0	chr20	20218492	20218631	(44225536)	+	MLT1H	LTR/ERVL-MaLR	409	549	(0)	2295344
337	34.9	1.4	5.2	chr20	20218633	20218786	(44225381)	+	L2c	LINE/L2	3232	3379	(8)	2295342
2056	9.9	1.0	0.0	chr20	20549993	20550286	(43893881)	C	L1PB1	LINE/L1	(0)	6151	5855	2295736
28	9.7	0.0	0.0	chr20	21397131	21397174	(43046993)	+	(GCC)n	Simple_repeat	1	44	(0)	2297034
12	24.6	0.0	2.5	chr20	21397449	21397488	(43046679)	+	(CGC)n	Simple_repeat	1	40	(0)	2297035
15	24.7	1.8	3.5	chr20	21513997	21514052	(42930115)	+	(GGC)n	Simple_repeat	1	57	(0)	2297202
32	23.7	2.2	1.1	chr20	21514118	21514206	(42929961)	+	G-rich	Low_complexity	1	91	(0)	2297203
35177	6.6	2.7	0.7	chr20	24927945	24932579	(39511588)	+	HERVE-int	LTR/ERV1	1975	6705	(1108)	2301512
13	23.0	5.6	4.0	chr20	25390236	25390306	(39053861)	+	(GCAGG)n	Simple_repeat	1	75	(0)	2302096
18	25.3	1.3	5.1	chr20	25390705	25390781	(39053386)	+	(CCG)n	Simple_repeat	1	78	(0)	2302097
15	29.0	0.0	0.0	chr20	25390896	25390945	(39053222)	+	(CCCCCG)n	Simple_repeat	1	50	(0)	2302098
16	22.7	4.2	4.0	chr20	25585610	25585681	(38858486)	+	G-rich	Low_complexity	1	75	(0)	2302423
2081	29.9	5.3	4.2	chr20	25862918	25864200	(38579967)	C	SST1	Satellite/centr	(11)	1552	274	2302870
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
10989	12.4	0.7	0.1	chr20	25871855	25873424	(38570743)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2302884
2131	14.6	1.4	2.2	chr20	25873425	25873782	(38570385)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2302884
1331	24.3	8.4	3.7	chr20	25873783	25874070	(38570097)	C	L1ME3F	LINE/L1	(747)	5496	5187	2302883
1093	20.0	13.0	2.9	chr20	26275627	26275924	(38168243)	+	L1M5	LINE/L1	5179	5495	(748)	2303535
2141	15.3	0.0	2.2	chr20	26275926	26276286	(38167881)	C	THE1A	LTR/ERVL-MaLR	(0)	355	3	2303537
602	10.2	0.0	12.6	chr20	26276289	26276423	(38167744)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1463	2303537
1854	17.6	0.0	0.7	chr20	28564717	28565012	(35879155)	+	AluJo	SINE/Alu	1	294	(18)	2303596
8063	19.7	6.6	2.5	chr20	28565013	28565466	(35878701)	C	LTR53-int	LTR/ERVL	(1471)	1858	1390	2303595
1481	22.4	3.7	0.3	chr20	28613766	28614055	(35830112)	C	AluJr	SINE/Alu	(5)	307	8	2303666
14982	24.9	3.7	1.9	chr20	28614056	28617655	(35826512)	C	L1MA6	LINE/L1	(2629)	4933	466	2303664
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
749	22.7	2.1	3.8	chr20	29436855	29438223	(35005944)	+	BSR/Beta	Satellite	1	1346	(15)	2304119
1363	28.8	2.3	1.1	chr20	29438330	29438769	(35005398)	+	BSR/Beta	Satellite	1	445	(71)	2304119
456	30.9	6.4	6.8	chr20	29785320	29785397	(34658770)	C	L1ME4a	LINE/L1	(867)	5279	5208	2304546
2363	13.1	0.8	0.8	chr20	29785398	29785752	(34658415)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2304550
2044	16.2	0.0	2.3	chr20	30169147	30169493	(34274674)	+	THE1A	LTR/ERVL-MaLR	3	341	(14)	2304662
568	24.3	12.5	1.2	chr20	30169498	30169783	(34274384)	C	L1M5	LINE/L1	(744)	5499	5181	2304663
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
24	25.8	0.0	2.6	chr20	30290568	30290644	(34153523)	+	G-rich	Low_complexity	1	77	(0)	2304833
2203	14.4	0.0	2.2	chr20	30340986	30341348	(34102819)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2304917
1456	22.3	7.4	3.2	chr20	30341349	30341632	(34102535)	C	L1ME3F	LINE/L1	(747)	5496	5187	2304916
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
14	13.4	6.1	0.0	chr20	31573028	31573060	(32871107)	+	GA-rich	Low_complexity	1	35	(0)	2306294
363	22.5	2.2	1.7	chr20	31573376	31573489	(32870678)	+	MIR	SINE/MIR	30	146	(62)	2306295
1695	12.7	6.9	2.8	chr20	31573504	31573794	(32870373)	C	AluJb	SINE/Alu	(3)	309	6	2306296
13	24.2	3.5	3.4	chr20	31861669	31861725	(32582442)	+	(GGCGG)n	Simple_repeat	1	59	(0)	2307039
13	10.0	5.9	2.8	chr20	31880001	31880034	(32564133)	+	G-rich	Low_complexity	1	36	(0)	2307086
51	26.0	4.2	4.0	chr20	32019084	32019324	(32424843)	+	(GGC)n	Simple_repeat	1	251	(0)	2307430
13	27.6	3.8	3.7	chr20	32019458	32019536	(32424631)	+	(CTGCCC)n	Simple_repeat	1	82	(0)	2307431
19	17.7	0.0	2.5	chr20	32358330	32358369	(32085798)	+	(CA)n	Simple_repeat	1	40	(0)	2308298
50	26.2	3.6	4.7	chr20	32358520	32358766	(32085401)	+	(GCC)n	Simple_repeat	1	256	(0)	2308299
14	19.1	0.0	2.6	chr20	32358768	32358805	(32085362)	+	GA-rich	Low_complexity	1	38	(0)	2308300
460	24.0	9.3	2.4	chr20	32743631	32743826	(31700341)	+	MIRb	SINE/MIR	46	267	(1)	2309172
641	30.8	4.4	4.0	chr20	33121391	33121447	(31322720)	C	MIRb	SINE/MIR	(7)	261	207	2310002
2737	9.6	0.3	0.0	chr20	33121448	33121801	(31322366)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2310003
12217	8.8	0.4	0.1	chr20	33121802	33123376	(31320791)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2310003
2729	9.6	0.3	0.0	chr20	33123377	33123730	(31320437)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2310003
641	30.8	4.4	4.0	chr20	33123731	33123917	(31320250)	C	MIRb	SINE/MIR	(62)	206	16	2310002
15	4.8	0.0	0.0	chr20	34216182	34216203	(30227964)	+	(GCAA)n	Simple_repeat	1	22	(0)	2312528
14	5.0	0.0	0.0	chr20	34216252	34216272	(30227895)	+	(CGC)n	Simple_repeat	1	21	(0)	2312529
1616	25.4	9.5	0.5	chr20	34216376	34216932	(30227235)	C	L1MEg	LINE/L1	(925)	5221	4610	2312530
2327	7.9	0.6	3.7	chr20	34617761	34618087	(29826080)	+	THE1A	LTR/ERVL-MaLR	1	317	(38)	2313456
465	23.1	7.6	0.0	chr20	34618135	34618255	(29825912)	+	L1ME4a	LINE/L1	5991	6121	(3)	2313457
17	15.8	2.3	2.2	chr20	36051058	36051101	(28393066)	+	(GGAGTGG)n	Simple_repeat	1	45	(0)	2316726
20	13.4	0.0	4.4	chr20	36863794	36863838	(27580329)	+	GA-rich	Low_complexity	1	45	(0)	2318641
14	10.5	6.5	0.0	chr20	36863902	36863932	(27580235)	+	(CCT)n	Simple_repeat	1	33	(0)	2318642
1793	13.1	0.7	2.8	chr20	37178042	37178332	(27265835)	+	AluJr	SINE/Alu	21	305	(7)	2319437
218	25.8	0.0	7.0	chr20	37178333	37178391	(27265776)	+	MIRb	SINE/MIR	199	255	(13)	2319436
2327	9.2	0.7	0.0	chr20	37178564	37178867	(27265300)	C	AluSx	SINE/Alu	(6)	306	1	2319438
2414	5.0	0.0	0.4	chr20	37289116	37289392	(27154775)	C	AluSx1	SINE/Alu	(36)	276	1	2319672
255	32.4	1.8	2.6	chr20	37289861	37289974	(27154193)	C	MIR3	SINE/MIR	(77)	131	19	2319673
468	22.5	16.8	3.3	chr20	37289982	37290165	(27154002)	+	MIRb	SINE/MIR	13	226	(42)	2319674
28	3.3	0.0	0.0	chr20	38724419	38724449	(25719718)	+	(CGC)n	Simple_repeat	1	31	(0)	2322739
15	11.2	3.5	0.0	chr20	38724495	38724523	(25719644)	+	(GCC)n	Simple_repeat	1	30	(0)	2322740
1899	15.7	0.3	1.0	chr20	38764674	38764972	(25679195)	C	AluJb	SINE/Alu	(15)	297	1	2322821
12086	8.3	1.3	0.1	chr20	39286582	39288143	(25156024)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2323862
2705	9.0	0.3	0.3	chr20	39288144	39288498	(25155669)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2323862
13	24.1	3.1	4.5	chr20	41137372	41137435	(23306732)	+	G-rich	Low_complexity	1	66	(0)	2327096
13	14.8	0.0	3.1	chr20	41137476	41137507	(23306660)	+	(GCCCC)n	Simple_repeat	1	32	(0)	2327097
2670	9.3	2.8	0.3	chr20	41459455	41459800	(22984367)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2327578
11779	9.8	2.6	0.1	chr20	41459801	41461340	(22982827)	+	THE1A-int	LTR/ERVL-MaLR	1	1579	(1)	2327578
17	8.1	7.3	2.3	chr20	44531882	44531922	(19912245)	+	G-rich	Low_complexity	1	44	(0)	2333726
2119	13.9	5.5	1.4	chr20	45625008	45625372	(18818795)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2335997
2090	12.6	8.4	1.7	chr20	46759513	46759867	(17684300)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2338392
870	18.9	0.0	4.2	chr20	46833353	46833545	(17610622)	C	Charlie1a	DNA/hAT-Charlie	(5)	1450	1266	2338576
20	19.0	0.0	6.6	chr20	47501914	47501974	(16942193)	+	(GCG)n	Simple_repeat	1	61	(0)	2340296
16	18.3	2.2	2.2	chr20	47502034	47502078	(16942089)	+	(AGGCGG)n	Simple_repeat	1	46	(0)	2340297
2044	11.7	8.5	5.1	chr20	48452281	48452631	(15991536)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2342134
2041	11.6	1.0	1.0	chr20	48920897	48921198	(15522969)	C	AluJo	SINE/Alu	(10)	302	1	2343218
14	15.4	1.6	9.7	chr20	49713638	49713698	(14730469)	+	(GCGGCA)n	Simple_repeat	1	62	(0)	2345095
39	23.3	1.5	4.5	chr20	49713734	49713864	(14730303)	+	(CCG)n	Simple_repeat	1	133	(0)	2345096
656	32.6	7.8	6.0	chr20	50327820	50328188	(14115979)	C	L2a	LINE/L2	(2)	3424	3042	2346649
2584	10.5	0.3	1.4	chr20	50328189	50328556	(14115611)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2346650
656	32.6	7.8	6.0	chr20	50328557	50328639	(14115528)	C	L2a	LINE/L2	(385)	3041	2963	2346649
1793	17.8	1.9	1.6	chr20	50635373	50635681	(13808486)	+	AluJb	SINE/Alu	2	311	(1)	2347339
421	24.1	2.0	21.1	chr20	50635682	50635809	(13808358)	C	MIRb	SINE/MIR	(131)	137	33	2347338
2314	9.6	0.3	0.0	chr20	52035209	52035510	(12408657)	+	AluSx	SINE/Alu	1	303	(9)	2350596
15	13.2	0.0	5.4	chr20	52958256	52958292	(11485875)	+	(TTTA)n	Simple_repeat	1	37	(0)	2352513
2348	13.1	3.3	2.8	chr20	53099527	53099888	(11344279)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2352787
237	30.5	7.3	3.3	chr20	53331687	53331869	(11112298)	C	LTR33	LTR/ERVL	(0)	515	325	2353250
343	27.6	10.0	1.4	chr20	53910762	53910981	(10533186)	C	L2a	LINE/L2	(3)	3423	3183	2354649
2771	7.7	0.6	0.0	chr20	53911026	53911378	(10532789)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2354650
2683	15.7	5.2	8.2	chr20	54055192	54055265	(10388902)	+	L1MA9	LINE/L1	5542	5614	(698)	2354933
2350	11.1	0.8	1.1	chr20	54055266	54055621	(10388546)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2354934
783	20.7	4.8	1.1	chr20	57048148	57048328	(7395839)	+	MER20	DNA/hAT-Charlie	32	219	(0)	2360444
430	30.3	8.0	0.5	chr20	57048352	57048570	(7395597)	C	L2a	LINE/L2	(513)	2906	2670	2360443
223	30.0	0.0	1.2	chr20	57351571	57351651	(7092516)	C	MIR3	SINE/MIR	(20)	188	109	2361036
1989	14.2	8.0	0.9	chr20	61029163	61029510	(3414657)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2366837
33	24.1	5.1	3.7	chr20	62220118	62220273	(2223894)	+	(CGGAGC)n	Simple_repeat	1	164	(0)	2368302
30	12.7	2.9	9.3	chr20	62220278	62220381	(2223786)	+	(CGCCC)n	Simple_repeat	1	107	(0)	2368303
19	25.8	6.0	2.3	chr20	63177397	63177479	(1266688)	+	(GC)n	Simple_repeat	1	88	(0)	2369341
17	16.5	7.1	1.7	chr20	63177580	63177635	(1266532)	+	(GCGACG)n	Simple_repeat	1	60	(0)	2369342
28	0.0	0.0	0.0	chr20	64255724	64255749	(188418)	+	(GGC)n	Simple_repeat	1	26	(0)	2370630
17	0.0	0.0	0.0	chr20	64255876	64255896	(188271)	+	(GCC)n	Simple_repeat	1	21	(0)	2370631
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
2828	18.2	1.6	1.8	chr21	7942700	7957766	(38752217)	+	(CATTC)n	Satellite	1	15309	(0)	2373121
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
797	22.4	0.5	0.1	chr21	8229975	8230765	(38479218)	+	(TCTC)n	Simple_repeat	2	795	(0)	2373327
446	20.9	0.1	6.5	chr21	8230776	8230919	(38479064)	+	MER39B	LTR/ERV1	298	454	(253)	2373328
1247	22.8	0.6	0.2	chr21	8232546	8235312	(38474671)	+	(TCTC)n	Simple_repeat	1	2784	(0)	2373335
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
15708	0.1	0.0	0.0	chr21	8436876	8438744	(38271239)	+	SSU-rRNA_Hsa	rRNA	1	1869	(0)	2373613
13	8.1	3.6	3.5	chr21	8438766	8438793	(38271190)	+	(CCG)n	Simple_repeat	1	29	(0)	2373614
12	18.8	2.6	2.6	chr21	8438825	8438862	(38271121)	+	(CGCGTG)n	Simple_repeat	1	39	(0)	2373615
16	8.3	0.0	0.0	chr21	8438857	8438882	(38271101)	+	(CGTT)n	Simple_repeat	1	26	(0)	2373616
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
785	22.6	0.5	0.1	chr21	8455261	8456884	(38253099)	+	(TCTC)n	Simple_repeat	1	1629	(0)	2373669
560	22.7	0.5	0.2	chr21	8464121	8465014	(38244969)	+	(CTCT)n	Simple_repeat	1	897	(0)	2373686
53	2.0	0.0	0.0	chr21	8465015	8465064	(38244919)	+	(GT)n	Simple_repeat	1	50	(0)	2373687
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
3424	19.3	3.5	9.5	chr21	9143369	9144153	(37565830)	C	LTR49-int	LTR/ERV1	(1013)	5318	4572	2374278
1738	18.7	0.7	1.0	chr21	9144154	9144447	(37565536)	C	AluJb	SINE/Alu	(18)	294	2	2374279
3424	21.2	4.9	9.9	chr21	9144448	9144867	(37565116)	C	LTR49-int	LTR/ERV1	(1760)	4571	4283	2374278
962	18.0	5.9	0.5	chr21	9175675	9175897	(37534086)	+	L1MB3	LINE/L1	5947	6182	(1)	2374314
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
381	17.5	1.6	0.0	chr21	9248617	9248679	(37461304)	+	AluYj4	SINE/Alu	224	287	(24)	2374342
312	21.5	5.8	0.0	chr21	9248928	9248992	(37460991)	+	AluJb	SINE/Alu	225	293	(19)	2374343
76	18.0	0.0	0.0	chr21	9248994	9249134	(37460849)	+	(AATGG)n	Simple_repeat	1	141	(0)	2374344
2558	6.4	0.9	0.0	chr21	9249136	9249479	(37460504)	+	L1P1	LINE/L1	3726	4072	(2074)	2374345
1263	30.4	12.1	1.4	chr21	9257066	9257711	(37452272)	C	L2	LINE/L2	(1779)	1640	916	2374355
355	21.0	6.9	0.0	chr21	9257924	9258004	(37451979)	+	MER21C	LTR/ERVL	30	116	(822)	2374357
490	25.4	1.5	5.0	chr21	9258040	9258180	(37451803)	+	MER21C	LTR/ERVL	99	234	(634)	2374357
1574	22.3	7.7	4.1	chr21	9258166	9258605	(37451378)	+	MER21C	LTR/ERVL	457	913	(25)	2374357
2761	17.5	4.4	0.8	chr21	9317965	9318489	(37391494)	+	MER52A	LTR/ERV1	1211	1755	(0)	2374416
8987	11.4	0.1	1.4	chr21	9318490	9319139	(37390844)	C	L1MA3	LINE/L1	(297)	6008	5360	2374417
12218	15.8	5.4	4.3	chr21	9355449	9356047	(37353936)	C	Tigger1	DNA/TcMar-Tigger	(245)	2173	1633	2374457
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
1676	16.4	2.0	3.7	chr21	10415954	10416252	(36293731)	+	AluJb	SINE/Alu	1	294	(18)	2375512
398	8.6	0.2	0.0	chr21	10426491	10427038	(36282945)	+	(GTGGTG)n	Simple_repeat	1	549	(0)	2375540
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
1947	14.4	0.4	0.0	chr21	10439456	10439732	(36270251)	C	AluSx	SINE/Alu	(34)	278	1	2375565
2423	29.9	8.6	4.3	chr21	10439733	10439929	(36270054)	C	L1MDa	LINE/L1	(5195)	1438	1228	2375564
2178	12.2	0.3	0.0	chr21	10439930	10440225	(36269758)	C	AluSz	SINE/Alu	(14)	298	2	2375566
1875	15.5	5.2	1.6	chr21	14428653	14429019	(32280964)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2377812
9076	19.2	8.3	13.1	chr21	14429020	14429221	(32280762)	+	L1MA9	LINE/L1	4269	4464	(3095)	2377805
2662	9.0	0.3	0.0	chr21	14859743	14860096	(31849887)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2378384
27	3.5	0.0	0.0	chr21	15730357	15730386	(30979597)	+	(CGC)n	Simple_repeat	1	30	(0)	2379541
15	29.9	2.8	1.4	chr21	15730497	15730573	(30979410)	+	(CGGCCC)n	Simple_repeat	1	78	(0)	2379542
333	38.6	7.9	3.9	chr21	15813467	15813900	(30896083)	+	L2c	LINE/L2	1592	2044	(1375)	2379653
1996	10.2	0.8	18.9	chr21	15813904	15814337	(30895646)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2379654
9989	10.3	1.1	0.4	chr21	15814338	15815715	(30894268)	+	THE1A-int	LTR/ERVL-MaLR	1	1388	(192)	2379654
2407	11.6	0.3	0.3	chr21	15816028	15816382	(30893601)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2379654
518	30.8	12.6	7.2	chr21	17997186	17997522	(28712461)	C	LTR78	LTR/ERV1	(201)	1103	740	2382511
2510	11.0	0.0	3.0	chr21	17997523	17997886	(28712097)	C	THE1A	LTR/ERVL-MaLR	(0)	355	3	2382512
40	25.2	1.6	1.6	chr21	20998254	20998374	(25711609)	+	(CGC)n	Simple_repeat	1	123	(0)	2386432
15	26.1	3.0	2.9	chr21	20998431	20998497	(25711486)	+	(GGCAGC)n	Simple_repeat	1	69	(0)	2386433
10637	10.0	2.1	3.9	chr21	21745157	21746766	(24963217)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2387384
2529	8.0	0.8	3.9	chr21	21746769	21747069	(24962914)	+	THE1A	LTR/ERVL-MaLR	3	305	(50)	2387384
1883	11.5	2.6	8.2	chr21	21747070	21747205	(24962778)	+	AluSz	SINE/Alu	1	131	(181)	2387385
2502	9.3	0.6	5.9	chr21	26031413	26031787	(20678196)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2393398
2125	12.3	3.9	2.1	chr21	28670631	28671004	(18038979)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2397087
1584	16.1	4.6	2.9	chr21	30488480	30488545	(16221438)	+	AluJb	SINE/Alu	1	70	(242)	2399845
2742	8.5	0.3	0.0	chr21	30488546	30488899	(16221084)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2399846
1584	16.1	4.6	2.9	chr21	30488900	30489112	(16220871)	+	AluJb	SINE/Alu	71	285	(27)	2399845
262	26.0	1.3	0.0	chr21	30558817	30558893	(16151090)	C	L1ME3	LINE/L1	(1444)	4702	4625	2399930
1517	12.4	10.6	1.6	chr21	30558895	30559211	(16150772)	+	THE1D	LTR/ERVL-MaLR	3	429	(28)	2399932
13	8.9	10.5	2.4	chr21	31558695	31558732	(15151251)	+	(CCT)n	Simple_repeat	1	42	(0)	2401594
14	15.6	3.4	8.2	chr21	31659922	31659980	(15050003)	+	(GCCCG)n	Simple_repeat	1	61	(0)	2401850
28	20.6	7.3	1.7	chr21	31660030	31660138	(15049845)	+	G-rich	Low_complexity	1	117	(0)	2401851
14	22.1	2.0	3.9	chr21	32727802	32727852	(13982131)	+	(CTCCCG)n	Simple_repeat	1	52	(0)	2403671
2793	7.3	0.3	0.3	chr21	32767488	32767842	(13942141)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2403725
12	23.7	2.5	0.0	chr21	32772205	32772244	(13937739)	+	GA-rich	Low_complexity	1	41	(0)	2403729
2746	7.4	0.8	0.0	chr21	32876059	32876410	(13833573)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2403916
2087	13.8	3.9	3.3	chr21	33142031	33142390	(13567593)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	2404374
15	19.3	6.4	0.0	chr21	33588418	33588464	(13121519)	+	(GCC)n	Simple_repeat	1	50	(0)	2405243
20	26.4	2.5	2.4	chr21	33588685	33588764	(13121219)	+	(CCCCCG)n	Simple_repeat	1	82	(0)	2405244
33	22.6	1.6	6.2	chr21	33642406	33642532	(13067451)	+	G-rich	Low_complexity	1	129	(0)	2405359
13	25.8	1.9	3.6	chr21	33642732	33642785	(13067198)	+	(GGC)n	Simple_repeat	1	55	(0)	2405360
13	27.3	0.0	3.6	chr21	33642812	33642867	(13067116)	+	(CGCCCCG)n	Simple_repeat	1	56	(0)	2405361
27	22.0	5.3	5.0	chr21	34074110	34074242	(12635741)	+	(GCCCGCC)n	Simple_repeat	1	140	(0)	2406107
2908	5.1	0.3	1.7	chr21	34529749	34530108	(12179875)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2406774
2447	10.0	1.1	0.8	chr21	34568810	34569163	(12140820)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2406836
304	21.3	16.8	2.1	chr21	34569196	34569291	(12140692)	+	Tigger16a	DNA/TcMar-Tigger	790	902	(55)	2406837
17	12.7	0.0	0.0	chr21	34888500	34888525	(11821458)	+	(A)n	Simple_repeat	1	26	(0)	2407308
14	20.9	3.2	6.2	chr21	34888816	34888877	(11821106)	+	(CGC)n	Simple_repeat	1	64	(0)	2407309
2378	11.3	5.0	1.1	chr21	35302343	35302708	(11407275)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2407916
1045	22.8	6.0	6.4	chr21	35867449	35867790	(10842193)	C	MER74C	LTR/ERVL	(30)	528	112	2408761
2195	11.4	3.3	5.9	chr21	35867791	35868164	(10841819)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2408762
2528	12.4	0.0	0.3	chr21	35910332	35910696	(10799287)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2408819
1793	15.7	3.3	9.4	chr21	35977734	35977838	(10732145)	+	L1MA10	LINE/L1	5938	6047	(287)	2408936
2144	13.8	4.4	2.8	chr21	35977839	35978196	(10731787)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2408937
1793	15.7	3.3	9.4	chr21	35978197	35978463	(10731520)	+	L1MA10	LINE/L1	6048	6297	(37)	2408936
24	28.1	1.1	3.2	chr21	37073267	37073358	(9636625)	+	(CGG)n	Simple_repeat	1	93	(0)	2410977
16	11.7	3.6	0.0	chr21	37073463	37073490	(9636493)	+	(GT)n	Simple_repeat	1	29	(0)	2410978
2614	10.1	1.9	0.6	chr21	37279346	37279702	(9430281)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	2411294
2037	14.4	8.2	3.0	chr21	37469460	37469861	(9240122)	C	MSTA	LTR/ERVL-MaLR	(3)	425	1	2411654
2130	11.9	1.3	0.0	chr21	37579027	37579320	(9130663)	C	AluSc	SINE/Alu	(10)	299	2	2411823
1274	28.2	4.6	5.9	chr21	37579321	37579542	(9130441)	C	L1MEf	LINE/L1	(5480)	1557	1119	2411822
1239	20.9	8.7	1.2	chr21	38367266	38367725	(8342258)	C	MLT1F1	LTR/ERVL-MaLR	(9)	582	31	2412936
252	6.1	0.0	7.0	chr21	38367961	38368003	(8341980)	C	THE1D-int	LTR/ERVL-MaLR	(936)	715	659	2412937
708	25.3	15.6	5.9	chr21	38368050	38368473	(8341510)	C	L1ME3B	LINE/L1	(33)	6209	5737	2412938
2230	12.3	4.2	0.8	chr21	38746620	38746987	(7962996)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2413432
521	29.6	1.6	5.0	chr21	38746988	38747036	(7962947)	C	MIR	SINE/MIR	(168)	94	50	2413431
676	25.4	1.6	4.1	chr21	38940785	38940847	(7769136)	C	MIR	SINE/MIR	(21)	241	183	2413742
2450	10.0	2.9	1.9	chr21	38940848	38941224	(7768759)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2413743
13	9.3	2.4	9.3	chr21	39313332	39313373	(7396610)	+	GA-rich	Low_complexity	1	43	(0)	2414333
14	0.0	0.0	4.5	chr21	39313516	39313537	(7396446)	+	(GAGC)n	Simple_repeat	1	22	(0)	2414334
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
18	18.4	2.3	0.0	chr21	39348737	39348779	(7361204)	+	(CGCC)n	Simple_repeat	1	44	(0)	2414409
15	22.4	4.9	3.1	chr21	39348838	39348898	(7361085)	+	(GCG)n	Simple_repeat	1	64	(0)	2414410
2378	9.5	0.0	2.5	chr21	39539360	39539684	(7170299)	C	THE1A	LTR/ERVL-MaLR	(38)	317	1	2414772
12265	8.5	0.4	0.3	chr21	39539695	39541267	(7168716)	C	THE1A-int	LTR/ERVL-MaLR	(6)	1574	1	2414772
2796	7.9	0.3	0.0	chr21	39541268	39541621	(7168362)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2414772
12431	9.0	1.8	0.0	chr21	40247223	40248774	(6461209)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2415733
2825	10.1	0.0	0.0	chr21	40248775	40249129	(6460854)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2415733
904	21.8	5.4	4.1	chr21	41624088	41624307	(5085676)	+	MER58A	DNA/hAT-Charlie	2	224	(0)	2417752
937	18.6	5.5	4.3	chr21	41624345	41624385	(5085598)	C	L1MC2	LINE/L1	(0)	6344	6303	2417753
2776	5.9	0.3	0.0	chr21	41624386	41624739	(5085244)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2417754
937	18.6	5.5	4.3	chr21	41624740	41624950	(5085033)	C	L1MC2	LINE/L1	(42)	6302	6089	2417753
1798	32.3	7.3	3.5	chr21	41653581	41654524	(5055459)	C	ERV3-16A3_I-int	LTR/ERVL	(2378)	3289	2207	2417809
1973	14.3	3.9	3.3	chr21	41654525	41654886	(5055097)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2417810
270	27.4	0.0	7.6	chr21	41654887	41654917	(5055066)	C	ERV3-16A3_I-int	LTR/ERVL	(3020)	2206	2177	2417809
338	33.9	15.8	4.1	chr21	42215406	42215913	(4494070)	+	L3	LINE/CR1	3384	3947	(152)	2418605
2594	11.3	2.7	1.1	chr21	42215914	42216271	(4493712)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2418606
338	33.9	15.8	4.1	chr21	42216272	42216349	(4493634)	+	L3	LINE/CR1	3948	4052	(47)	2418605
2751	15.4	4.4	3.7	chr21	42780598	42781022	(3928961)	C	LTR38B	LTR/ERV1	(179)	431	1	2419308
16	24.7	2.8	4.0	chr21	42974392	42974463	(3735520)	+	(CCCGCC)n	Simple_repeat	1	74	(0)	2419663
32	23.9	1.2	1.1	chr21	42974686	42974771	(3735212)	+	(CCG)n	Simple_repeat	1	87	(0)	2419664
13	0.0	0.0	4.8	chr21	43659537	43659557	(3050426)	+	(CCG)n	Simple_repeat	1	21	(0)	2420580
17	16.4	0.0	4.4	chr21	43659831	43659875	(3050108)	+	G-rich	Low_complexity	1	45	(0)	2420581
2302	9.5	0.7	0.0	chr21	43850417	43850712	(2859271)	+	AluSz	SINE/Alu	6	303	(9)	2420923
2374	14.4	1.7	11.1	chr21	43850713	43850805	(2859178)	+	MER4A1	LTR/ERV1	191	262	(210)	2420922
1836	18.5	3.8	1.9	chr21	43850806	43851169	(2858814)	C	THE1C	LTR/ERVL-MaLR	(0)	375	5	2420924
2374	14.4	1.7	11.1	chr21	43851170	43851396	(2858587)	+	MER4A1	LTR/ERV1	263	472	(0)	2420922
27	8.8	1.4	9.5	chr21	44299996	44300068	(2409915)	+	G-rich	Low_complexity	1	74	(0)	2421591
9642	20.5	4.4	2.8	chr21	44670311	44672288	(2037695)	+	L1MA4A	LINE/L1	11	2186	(4663)	2422015
17	10.8	0.0	3.1	chr21	45643613	45643644	(1066339)	+	(GGC)n	Simple_repeat	1	32	(0)	2423032
14	24.9	3.9	0.0	chr21	45643791	45643842	(1066141)	+	(CCCGG)n	Simple_repeat	1	54	(0)	2423033
11	17.4	0.0	5.6	chr21	45644018	45644053	(1065930)	+	(CGCCGC)n	Simple_repeat	1	36	(0)	2423034
9171	31.4	2.8	1.1	chr22	11318917	11320518	(39497950)	C	PRIMA41-int	LTR/ERV1	(1593)	6163	4519	2425036
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
3058	20.8	2.7	1.3	chr22	11900876	11902001	(38916467)	C	L1MA5	LINE/L1	(354)	5946	4805	2425510
3134	12.3	0.8	0.0	chr22	11930604	11931100	(38887368)	+	L1PA13	LINE/L1	5175	5675	(1091)	2425549
290	22.2	1.5	0.5	chr22	11932477	11932565	(38885903)	C	L1P4	LINE/L1	(1123)	5023	4933	2425553
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
194	23.1	0.0	1.9	chr22	12174483	12174535	(38643933)	+	MER5A	DNA/hAT-Charlie	118	169	(20)	2425783
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
14189	23.7	2.0	1.3	chr22	16375985	16377216	(34441252)	+	(GGAAT)n	Simple_repeat	2	1250	(0)	2427243
12	22.7	0.0	0.0	chr22	16718087	16718118	(34100350)	+	(CTTTC)n	Simple_repeat	1	32	(0)	2427720
2153	15.0	0.0	2.2	chr22	16753345	16753705	(34064763)	+	THE1A	LTR/ERVL-MaLR	3	355	(0)	2427764
1508	23.8	8.2	3.5	chr22	16753706	16753989	(34064479)	C	L1ME3F	LINE/L1	(747)	5496	5187	2427762
21	3.3	0.0	3.0	chr22	17121362	17121394	(33697074)	+	(GGCGG)n	Simple_repeat	1	33	(0)	2428253
2091	8.8	6.9	0.0	chr22	18149659	18149942	(32668526)	+	AluSx	SINE/Alu	1	305	(7)	2430308
4341	4.4	0.2	0.0	chr22	18890645	18891207	(31927261)	C	HSATI	Satellite	(10)	567	4	2431162
36	2.7	13.3	0.0	chr22	18891210	18891284	(31927184)	+	(AT)n	Simple_repeat	1	85	(0)	2431163
248	12.9	3.9	2.6	chr22	18891846	18892362	(31926106)	+	(TATAATA)n	Simple_repeat	1	537	(0)	2431165
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
14	19.9	0.0	7.5	chr22	18906193	18906245	(31912223)	+	G-rich	Low_complexity	1	53	(0)	2431193
3871	10.9	10.7	4.0	chr22	19123203	19123611	(31694857)	C	MER4D1	LTR/ERV1	(10)	890	459	2431481
1208	16.9	12.5	6.0	chr22	19448429	19448695	(31369773)	C	AluJr	SINE/Alu	(24)	288	2	2432025
14	16.4	2.9	0.0	chr22	20320135	20320168	(30498300)	+	(CCGCC)n	Simple_repeat	1	35	(0)	2433108
1153	11.0	0.7	0.0	chr22	20338381	20338535	(30479933)	+	AluYm1	SINE/Alu	13	168	(143)	2433146
51	2.3	11.4	0.0	chr22	20338573	20338660	(30479808)	+	(AT)n	Simple_repeat	1	98	(0)	2433147
4938	1.6	0.2	0.0	chr22	20338666	20339226	(30479242)	+	HSATI	Satellite	6	567	(10)	2433148
23	21.0	0.0	10.2	chr22	20495544	20495651	(30322817)	+	(CGCGCC)n	Simple_repeat	1	108	(0)	2433426
41	2.4	0.0	0.0	chr22	20495799	20495840	(30322628)	+	(GGGAGGC)n	Simple_repeat	1	42	(0)	2433427
113	29.2	1.3	4.4	chr22	20496137	20496610	(30321858)	+	(TCCC)n	Simple_repeat	1	480	(0)	2433428
2008	15.7	5.1	0.6	chr22	21084650	21085007	(29733461)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2434527
2034	7.4	5.0	1.5	chr22	21085016	21085286	(29733182)	C	AluY	SINE/Alu	(1)	310	30	2434528
12	24.1	0.0	0.0	chr22	21103248	21103281	(29715187)	+	(TTCTG)n	Simple_repeat	1	34	(0)	2434576
260	17.0	0.0	0.0	chr22	21567469	21567515	(29250953)	C	L2a	LINE/L2	(5)	3421	3375	2435442
249	31.0	0.0	3.9	chr22	21567526	21567629	(29250839)	+	L2b	LINE/L2	3250	3349	(26)	2435437
13	24.0	6.0	2.8	chr22	21568143	21568209	(29250259)	+	(GCGCC)n	Simple_repeat	1	71	(0)	2435443
16	15.8	0.0	2.7	chr22	21735482	21735518	(29082950)	+	(GCCC)n	Simple_repeat	1	37	(0)	2435784
15	17.2	2.0	5.8	chr22	21735618	21735668	(29082800)	+	(CGCCCCG)n	Simple_repeat	1	52	(0)	2435785
33	28.0	2.7	3.3	chr22	21867413	21867558	(28950910)	+	(CCG)n	Simple_repeat	1	150	(0)	2436079
12	9.8	0.0	0.0	chr22	21867625	21867646	(28950822)	+	(TGCC)n	Simple_repeat	1	22	(0)	2436080
19	24.2	1.7	1.6	chr22	21867648	21867707	(28950761)	+	G-rich	Low_complexity	1	61	(0)	2436081
24	22.7	1.2	4.7	chr22	22249758	22249841	(28568627)	+	A-rich	Low_complexity	1	85	(0)	2436667
12	21.6	0.0	4.9	chr22	22576440	22576480	(28241988)	+	G-rich	Low_complexity	1	41	(0)	2437106
22	3.1	2.9	2.8	chr22	23617580	23617614	(27200854)	+	(CAT)n	Simple_repeat	1	36	(0)	2438614
3955	10.6	2.1	9.9	chr22	23621933	23622044	(27196424)	+	LTR71B	LTR/ERV1	550	610	(0)	2438618
28	0.0	2.9	2.9	chr22	23622096	23622129	(27196339)	+	(CAT)n	Simple_repeat	1	35	(0)	2438620
2243	7.8	1.4	4.9	chr22	24853611	24853916	(25964552)	C	AluY	SINE/Alu	(16)	295	1	2440808
2850	6.8	0.0	2.7	chr22	24853917	24854152	(25964316)	C	THE1A	LTR/ERVL-MaLR	(120)	235	1	2440807
2492	11.1	0.6	0.8	chr22	24978111	24978466	(25840002)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2441146
35	19.1	1.0	5.0	chr22	25282477	25282574	(25535894)	+	GA-rich	Low_complexity	1	99	(0)	2441920
18	7.7	0.0	0.0	chr22	25282866	25282893	(25535575)	+	(GGC)n	Simple_repeat	1	28	(0)	2441921
410	27.4	12.1	3.4	chr22	26484073	26484276	(24334192)	+	MIRb	SINE/MIR	33	256	(12)	2444423
13	25.3	2.3	0.0	chr22	26590116	26590158	(24228310)	+	G-rich	Low_complexity	1	44	(0)	2444695
15	7.8	0.0	3.5	chr22	26590191	26590219	(24228249)	+	(GCCCC)n	Simple_repeat	1	29	(0)	2444696
188	26.5	5.8	0.0	chr22	27095950	27095998	(23722470)	C	MIR3	SINE/MIR	(57)	151	100	2445914
2249	12.8	3.7	1.1	chr22	27096030	27096400	(23722068)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2445915
1829	23.4	10.9	1.8	chr22	27666470	27666961	(23151507)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	8	2447245
1636	14.8	8.0	6.0	chr22	27891489	27891855	(22926613)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2447687
2083	12.7	8.0	1.2	chr22	27934215	27934550	(22883918)	+	THE1B	LTR/ERVL-MaLR	4	364	(0)	2447754
250	24.3	0.0	0.0	chr22	27934552	27934621	(22883847)	C	L1MC5a	LINE/L1	(603)	2174	2105	2447755
26	19.0	4.4	5.3	chr22	28773015	28773138	(22045330)	+	G-rich	Low_complexity	1	122	(0)	2449171
305	20.0	0.0	3.0	chr22	28773181	28773247	(22045221)	C	MIR	SINE/MIR	(118)	144	80	2449172
199	23.1	0.0	0.0	chr22	28773421	28773459	(22045009)	+	MIRb	SINE/MIR	191	229	(39)	2449173
15	0.0	0.0	0.0	chr22	28883651	28883669	(21934799)	+	(GCC)n	Simple_repeat	1	19	(0)	2449492
46	14.8	0.0	1.2	chr22	28883804	28883887	(21934581)	+	(GCC)n	Simple_repeat	1	84	(0)	2449493
13	23.5	3.3	4.8	chr22	29154521	29154580	(21663888)	+	(CCG)n	Simple_repeat	1	62	(0)	2449982
701	16.4	8.3	0.0	chr22	29154717	29154838	(21663630)	+	FLAM_A	SINE/Alu	1	133	(9)	2449983
287	25.2	5.7	5.3	chr22	29267490	29267630	(21550838)	+	MIR3	SINE/MIR	42	184	(24)	2450245
11500	8.7	1.7	3.1	chr22	29547663	29547849	(21270619)	C	THE1A-int	LTR/ERVL-MaLR	(1393)	187	1	2450810
2678	9.9	0.0	0.3	chr22	29547850	29548203	(21270265)	C	THE1A	LTR/ERVL-MaLR	(0)	355	3	2450810
10288	9.9	4.8	0.0	chr22	29597086	29598586	(21219882)	C	LTR12C	LTR/ERV1	(0)	1579	3	2450958
14	23.7	3.5	3.3	chr22	29883118	29883175	(20935293)	+	(GCGC)n	Simple_repeat	1	60	(0)	2451570
13	0.0	0.0	0.0	chr22	29883217	29883233	(20935235)	+	(GGC)n	Simple_repeat	1	17	(0)	2451571
32	8.3	1.9	1.8	chr22	30246390	30246443	(20572025)	+	(GGA)n	Simple_repeat	1	55	(0)	2452228
12	17.6	0.0	5.6	chr22	30635629	30635664	(20182804)	+	G-rich	Low_complexity	1	36	(0)	2453063
19	16.8	0.0	0.0	chr22	30635690	30635695	(20182773)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	2453064
15	17.6	0.0	0.0	chr22	30635696	30635727	(20182741)	+	(GGC)n	Simple_repeat	1	32	(0)	2453065
12	15.3	3.5	0.0	chr22	30635736	30635764	(20182704)	+	(GCGCC)n	Simple_repeat	1	30	(0)	2453066
31	6.0	0.0	6.7	chr22	30968842	30968901	(19849567)	+	(GCC)n	Simple_repeat	1	60	(0)	2453682
1488	10.7	0.5	0.0	chr22	30988216	30988411	(19830057)	+	AluSx1	SINE/Alu	95	291	(21)	2453712
557	22.9	4.5	2.3	chr22	30988687	30988860	(19829608)	C	MamRep4096	DNA/hAT-Tip100	(157)	269	92	2453713
2999	4.0	0.8	0.0	chr22	31047710	31048061	(19770407)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2453875
17	20.2	4.8	4.6	chr22	31346017	31346078	(19472390)	+	(CG)n	Simple_repeat	1	65	(0)	2454547
44	24.2	3.4	4.3	chr22	31346131	31346309	(19472159)	+	(GGC)n	Simple_repeat	1	185	(0)	2454548
2263	7.8	1.7	3.0	chr22	32474142	32474436	(18344032)	C	AluJb	SINE/Alu	(21)	291	1	2457053
13	26.0	1.7	4.9	chr22	32474941	32475000	(18343468)	+	(GCC)n	Simple_repeat	1	61	(0)	2457054
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
2173	19.1	7.3	4.7	chr22	33348490	33348780	(17469688)	+	MLT2B1	LTR/ERVL	1	305	(215)	2458885
2466	13.0	0.3	0.8	chr22	33348781	33349145	(17469323)	+	THE1B	LTR/ERVL-MaLR	2	364	(0)	2458886
4079	21.2	8.2	2.3	chr22	33800223	33800921	(17017547)	C	L1MD2	LINE/L1	(16)	6343	5614	2459802
2795	7.1	0.3	0.0	chr22	33800922	33801275	(17017193)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2459803
4079	19.9	4.9	0.9	chr22	33801276	33801749	(17016719)	C	L1MD2	LINE/L1	(746)	5613	5101	2459802
927	34.6	8.3	3.6	chr22	34776131	34777096	(16041372)	C	L2c	LINE/L2	(120)	3267	2240	2461624
1435	17.9	3.3	0.8	chr22	34777101	34777365	(16041103)	+	THE1C	LTR/ERVL-MaLR	1	272	(103)	2461625
6208	12.0	11.6	1.2	chr22	34777361	34778360	(16040108)	+	THE1C-int	LTR/ERVL-MaLR	16	1132	(499)	2461625
12	20.6	2.4	2.4	chr22	35257999	35258039	(15560429)	+	(GGCTGC)n	Simple_repeat	1	42	(0)	2462580
234	27.7	21.2	0.8	chr22	36776970	36777089	(14041379)	+	MIRb	SINE/MIR	97	247	(21)	2465820
352	25.6	1.6	5.3	chr22	37117979	37117992	(13700476)	C	MIR1_Amn	SINE/MIR	(88)	142	129	2466546
2582	11.9	0.8	0.3	chr22	37117993	37118354	(13700114)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2466547
428	24.0	1.1	1.5	chr22	37118355	37118471	(13699997)	C	MIR3	SINE/MIR	(102)	128	16	2466546
13	21.1	0.0	2.5	chr22	37686622	37686661	(13131807)	+	(TTCTCCC)n	Simple_repeat	1	40	(0)	2467835
365	8.5	0.0	0.0	chr22	37696601	37696647	(13121821)	C	AluSq2	SINE/Alu	(63)	250	204	2467850
13	4.3	3.9	3.7	chr22	37696869	37696894	(13121574)	+	(CGCCC)n	Simple_repeat	1	27	(0)	2467851
12	17.6	3.1	0.0	chr22	37697120	37697151	(13121317)	+	(GGTAGG)n	Simple_repeat	1	33	(0)	2467852
16	0.0	0.0	0.0	chr22	37746216	37746232	(13072236)	+	(A)n	Simple_repeat	1	17	(0)	2467968
27	8.9	1.9	3.8	chr22	37746284	37746335	(13072133)	+	(CGG)n	Simple_repeat	1	53	(0)	2467969
30	3.1	0.0	0.0	chr22	37805259	37805291	(13013177)	+	(GAGGCA)n	Simple_repeat	1	33	(0)	2468119
513	27.5	13.2	1.2	chr22	37904995	37905167	(12913301)	C	MIRb	SINE/MIR	(52)	216	20	2468376
16	20.7	0.0	4.2	chr22	37905344	37905391	(12913077)	+	(GGCT)n	Simple_repeat	1	48	(0)	2468377
13	8.5	4.0	0.0	chr22	37905914	37905938	(12912530)	+	(GGC)n	Simple_repeat	1	26	(0)	2468378
12	17.4	7.0	4.9	chr22	37906164	37906220	(12912248)	+	(GGC)n	Simple_repeat	1	61	(0)	2468379
28	19.3	5.5	4.3	chr22	37906307	37906415	(12912053)	+	(CGGAGC)n	Simple_repeat	1	115	(0)	2468380
201	26.3	3.4	0.0	chr22	38052594	38052650	(12765818)	C	MIR3	SINE/MIR	(112)	96	38	2468704
233	28.1	11.8	6.2	chr22	38052857	38053064	(12765404)	+	L2c	LINE/L2	3012	3322	(65)	2468705
14	21.3	2.6	0.0	chr22	38272954	38272991	(12545477)	+	(CGC)n	Simple_repeat	1	39	(0)	2469147
15	23.5	1.9	1.9	chr22	38273101	38273152	(12545316)	+	(CCGCCCC)n	Simple_repeat	1	53	(0)	2469148
27	27.2	2.0	2.0	chr22	38317381	38317480	(12500988)	+	(CCGC)n	Simple_repeat	1	102	(0)	2469244
17	25.9	1.4	4.2	chr22	38317669	38317738	(12500730)	+	G-rich	Low_complexity	1	71	(0)	2469245
260	36.2	7.9	0.0	chr22	38318136	38318251	(12500217)	+	MIRc	SINE/MIR	58	183	(85)	2469246
243	26.9	6.8	4.6	chr22	38318491	38318608	(12499860)	C	MIR3	SINE/MIR	(8)	200	79	2469247
318	30.2	0.0	11.3	chr22	38318746	38318809	(12499659)	+	Charlie8	DNA/hAT-Charlie	34	89	(2339)	2469248
15	11.7	0.0	0.0	chr22	38505819	38505846	(12312622)	+	(CTCGC)n	Simple_repeat	1	28	(0)	2469636
385	26.4	14.2	0.8	chr22	38842874	38842995	(11975473)	C	MIRb	SINE/MIR	(14)	254	114	2470390
16	28.1	2.9	1.4	chr22	38871969	38872038	(11946430)	+	G-rich	Low_complexity	1	72	(0)	2470436
17	16.7	0.0	4.5	chr22	38872066	38872109	(11946359)	+	(CCCCGG)n	Simple_repeat	1	44	(0)	2470437
19	24.6	6.8	1.1	chr22	38872227	38872314	(11946154)	+	(GCGCGC)n	Simple_repeat	1	94	(0)	2470438
21	25.2	2.1	5.2	chr22	39152445	39152538	(11665930)	+	G-rich	Low_complexity	1	96	(0)	2471004
21	15.9	4.1	0.0	chr22	39152560	39152608	(11665860)	+	(CGCGCA)n	Simple_repeat	1	51	(0)	2471005
15	12.2	5.6	0.0	chr22	39152802	39152837	(11665631)	+	G-rich	Low_complexity	1	38	(0)	2471006
2026	5.5	0.0	0.4	chr22	40950240	40950475	(9867993)	+	AluSq2	SINE/Alu	31	265	(48)	2474734
25	17.7	0.0	3.3	chr22	40951150	40951210	(9867258)	+	(GCCCC)n	Simple_repeat	1	61	(0)	2474735
215	23.8	4.9	4.2	chr22	41285725	41285809	(9532659)	+	MIRc	SINE/MIR	69	150	(80)	2475552
26	20.5	0.0	0.0	chr22	41413576	41413631	(9404837)	+	GA-rich	Low_complexity	1	56	(0)	2475855
17	16.8	0.0	7.4	chr22	41833037	41833090	(8985378)	+	G-rich	Low_complexity	1	54	(0)	2476877
12	15.3	3.5	0.0	chr22	41833358	41833386	(8985082)	+	(GGTG)n	Simple_repeat	1	30	(0)	2476878
487	29.5	5.2	2.7	chr22	42614128	42614315	(8204153)	+	MIRc	SINE/MIR	71	263	(5)	2478497
2593	5.6	0.0	0.0	chr22	42868075	42868378	(7950090)	C	AluY	SINE/Alu	(7)	304	1	2479123
12	24.6	3.6	3.5	chr22	43186826	43186881	(7631587)	+	(CCG)n	Simple_repeat	1	58	(0)	2479779
12	14.7	3.7	8.9	chr22	43923847	43923900	(6894568)	+	(GACCC)n	Simple_repeat	1	56	(0)	2481024
15	3.8	7.4	0.0	chr22	43923885	43923911	(6894557)	+	(CCG)n	Simple_repeat	1	29	(0)	2481025
15	7.9	3.7	0.0	chr22	44112139	44112165	(6706303)	+	(AAAC)n	Simple_repeat	1	28	(0)	2481384
2343	12.5	3.3	2.2	chr22	44416265	44416624	(6401844)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2481921
2230	27.9	6.2	5.4	chr22	44416625	44416956	(6401512)	C	L1MEf	LINE/L1	(4487)	1928	1575	2481920
617	29.9	2.0	8.4	chr22	44582489	44582809	(6235659)	C	MLT1J	LTR/ERVL-MaLR	(102)	410	111	2482237
254	26.2	5.6	2.3	chr22	44582787	44582872	(6235596)	C	LTR67B	LTR/ERVL	(501)	119	31	2482238
1240	16.7	4.3	1.3	chr22	46263985	46264211	(4554257)	C	AluJr4	SINE/Alu	(25)	287	54	2485268
2259	10.1	2.5	0.6	chr22	46264213	46264560	(4553908)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2485269
1590	20.6	9.5	3.2	chr22	46335153	46335459	(4483009)	C	MER4B	LTR/ERV1	(263)	347	2	2485393
13	26.8	0.0	7.0	chr22	46536919	46536989	(4281479)	+	(GCGCCCC)n	Simple_repeat	1	71	(0)	2485680
19	26.7	1.5	1.5	chr22	46537102	46537166	(4281302)	+	(CGG)n	Simple_repeat	1	66	(0)	2485681
17	19.6	1.5	7.3	chr22	46537621	46537687	(4280781)	+	(GGCCC)n	Simple_repeat	1	68	(0)	2485682
93	19.7	0.0	0.0	chr22	47379205	47379385	(3439083)	+	(GCG)n	Simple_repeat	1	181	(0)	2486767
239	28.1	2.2	1.1	chr22	47379395	47379484	(3438984)	+	L1MEi	LINE/L1	1394	1484	(728)	2486768
1823	24.6	2.3	0.4	chr22	49738925	49739398	(1079070)	C	L1MB7	LINE/L1	(334)	6710	6228	2489700
2318	12.9	1.7	0.6	chr22	49739399	49739749	(1078719)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2489702
6431	9.0	1.7	0.0	chr22	49739750	49740631	(1077837)	+	THE1A-int	LTR/ERVL-MaLR	1	897	(683)	2489702
1434	15.8	7.3	2.3	chr22	50527769	50528028	(290440)	C	AluJb	SINE/Alu	(5)	307	34	2490811
1553	15.0	10.5	1.7	chr3	5430724	5431070	(192864489)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2500811
327	35.0	10.9	5.2	chr3	5431071	5431268	(192864291)	C	L2c	LINE/L2	(83)	3304	3102	2500810
534	26.4	21.2	1.7	chr3	5756719	5757082	(192538477)	C	LTR16C	LTR/ERVL	(31)	458	18	2501281
2051	9.4	16.1	0.0	chr3	5880837	5881134	(192414425)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2501453
2521	8.8	1.1	0.6	chr3	8602726	8603078	(189692481)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2505662
645	31.6	4.0	10.9	chr3	9143765	9144448	(189151111)	+	L2c	LINE/L2	2472	3090	(297)	2506596
2738	8.2	0.6	0.3	chr3	9144449	9144802	(189150757)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2506597
448	29.1	2.4	8.6	chr3	9144803	9144827	(189150732)	+	L2c	LINE/L2	3091	3117	(270)	2506596
404	23.7	1.0	3.0	chr3	9144846	9144945	(189150614)	+	MIRb	SINE/MIR	148	245	(23)	2506598
1212	18.0	6.1	7.2	chr3	9360437	9360507	(188935052)	C	L1MB7	LINE/L1	(538)	5636	5566	2507056
2135	14.7	2.3	3.9	chr3	9360508	9360868	(188934691)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2507063
1212	18.0	6.1	7.2	chr3	9360869	9361103	(188934456)	C	L1MB7	LINE/L1	(609)	5565	5333	2507056
16	27.6	3.0	1.4	chr3	9649441	9649507	(188646052)	+	(GGCGGA)n	Simple_repeat	1	69	(0)	2507672
12	11.5	3.3	3.2	chr3	9649587	9649636	(188645923)	+	(GCC)n	Simple_repeat	1	50	(0)	2507673
12	21.5	7.1	1.7	chr3	10248718	10248773	(188046786)	+	(CGGCGCC)n	Simple_repeat	1	60	(0)	2509045
2014	15.7	3.9	2.5	chr3	10896875	10897233	(187398326)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2510340
11972	9.4	0.7	1.6	chr3	10897234	10898827	(187396732)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2510340
2126	14.3	3.9	3.6	chr3	10898828	10899190	(187396369)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2510340
14	0.0	0.0	0.0	chr3	14947613	14947630	(183347929)	+	(GGC)n	Simple_repeat	1	18	(0)	2517903
17	23.7	4.4	2.8	chr3	14947927	14947994	(183347565)	+	(GGC)n	Simple_repeat	1	71	(0)	2517904
16	10.8	3.3	0.0	chr3	14948240	14948269	(183347290)	+	(CTC)n	Simple_repeat	1	31	(0)	2517905
2370	10.8	1.4	0.6	chr3	15602837	15603189	(182692370)	C	THE1B	LTR/ERVL-MaLR	(1)	363	8	2519131
10324	10.8	3.1	6.2	chr3	15603192	15603375	(182692184)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1401	2519131
1612	15.7	10.5	2.4	chr3	15885097	15885176	(182410383)	+	MLT1D	LTR/ERVL-MaLR	1	80	(425)	2519556
1893	12.8	7.4	1.2	chr3	15885177	15885507	(182410052)	C	THE1A	LTR/ERVL-MaLR	(2)	353	1	2519557
1612	15.7	10.5	2.4	chr3	15885508	15885765	(182409794)	+	MLT1D	LTR/ERVL-MaLR	81	370	(135)	2519556
2551	8.8	0.8	3.0	chr3	16096347	16096580	(182198979)	+	THE1A	LTR/ERVL-MaLR	1	235	(120)	2519921
2432	10.3	0.0	0.0	chr3	16096581	16096892	(182198667)	+	AluSq2	SINE/Alu	1	312	(1)	2519922
342	22.3	8.1	4.0	chr3	16253006	16253182	(182042377)	+	MLT1H	LTR/ERVL-MaLR	1	178	(311)	2520232
351	24.9	11.4	4.4	chr3	16253250	16253394	(182042165)	+	MLT1H	LTR/ERVL-MaLR	404	549	(0)	2520232
312	29.1	9.0	6.5	chr3	17742106	17742322	(180553237)	+	L1MDb	LINE/L1	537	759	(5650)	2522303
18	6.4	2.7	5.3	chr3	17742520	17742559	(180553000)	+	(TCC)n	Simple_repeat	1	38	(0)	2522304
23	9.7	0.0	0.0	chr3	18424925	18424957	(179870602)	+	(GT)n	Simple_repeat	1	33	(0)	2523266
17	20.3	2.2	0.0	chr3	18424958	18424966	(179870593)	+	(GAGTGT)n	Simple_repeat	4	46	(0)	2523267
36	22.6	4.0	2.3	chr3	18425062	18425128	(179870431)	+	(GCCGCT)n	Simple_repeat	1	108	(21)	2523268
21	20.8	0.0	0.0	chr3	18425129	18425174	(179870385)	+	(GCT)n	Simple_repeat	1	46	(0)	2523269
36	22.6	4.0	2.3	chr3	18425175	18425185	(179870374)	+	(GCCGCT)n	Simple_repeat	109	129	(0)	2523268
14	18.1	5.4	5.1	chr3	18425215	18425220	(179870339)	+	(CCG)n	Simple_repeat	1	57	(0)	2523270
15	25.6	2.0	0.0	chr3	18425221	18425271	(179870288)	+	(GCCCGCA)n	Simple_repeat	1	52	(0)	2523271
27	20.5	3.3	4.3	chr3	18425323	18425413	(179870146)	+	GA-rich	Low_complexity	1	94	(0)	2523272
18	15.9	0.0	0.0	chr3	18444724	18444758	(179850801)	+	(GCC)n	Simple_repeat	1	35	(0)	2523289
19	3.3	3.0	2.9	chr3	18444826	18444858	(179850701)	+	(GAGC)n	Simple_repeat	1	34	(0)	2523290
34	29.0	0.7	4.6	chr3	18444859	18444970	(179850589)	+	G-rich	Low_complexity	6	151	(0)	2523291
12	21.4	3.3	6.3	chr3	18445150	18445210	(179850349)	+	(CGGCC)n	Simple_repeat	1	63	(0)	2523292
18	10.7	0.0	3.0	chr3	18445289	18445321	(179850238)	+	(GCC)n	Simple_repeat	1	33	(0)	2523293
705	15.8	0.0	5.7	chr3	19785059	19785176	(178510383)	+	L1MA3	LINE/L1	6173	6290	(15)	2525109
2665	9.6	0.3	0.0	chr3	19785177	19785530	(178510029)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2525110
14	16.2	0.0	0.0	chr3	19947408	19947435	(178348124)	+	(CGC)n	Simple_repeat	1	28	(0)	2525351
18	17.9	0.0	0.0	chr3	20039916	20039954	(178255605)	+	(CCCCCA)n	Simple_repeat	1	39	(0)	2525554
14	9.6	0.0	0.0	chr3	20040191	20040213	(178255346)	+	(GGC)n	Simple_repeat	1	23	(0)	2525555
15	17.5	0.0	0.0	chr3	20040242	20040274	(178255285)	+	(GCCGCC)n	Simple_repeat	1	33	(0)	2525556
21	22.5	1.2	6.0	chr3	20040468	20040549	(178255010)	+	G-rich	Low_complexity	1	83	(0)	2525557
33	9.0	5.0	0.0	chr3	20040837	20040896	(178254663)	+	(CCCGCCT)n	Simple_repeat	1	63	(0)	2525558
1867	13.7	6.3	6.8	chr3	20206556	20206938	(178088621)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2525865
9557	10.4	2.5	1.6	chr3	20206939	20207948	(178087611)	C	L1PA14	LINE/L1	(1247)	4899	3872	2525864
2314	13.0	2.5	0.0	chr3	21070333	21070687	(177224872)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2526965
674	32.7	5.6	5.0	chr3	22546480	22547119	(175748440)	C	L1M5	LINE/L1	(1497)	4649	3997	2528869
1889	12.9	8.4	1.1	chr3	22547120	22547472	(175748087)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2528872
674	32.7	5.6	5.0	chr3	22547473	22547689	(175747870)	C	L1M5	LINE/L1	(2150)	3996	3784	2528869
856	24.7	12.1	3.3	chr3	23627284	23627643	(174667916)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2530422
18	6.0	8.6	0.0	chr3	23945493	23945527	(174350032)	+	(CGG)n	Simple_repeat	1	38	(0)	2531074
14	15.0	5.4	0.0	chr3	24303174	24303210	(173992349)	+	A-rich	Low_complexity	1	39	(0)	2531667
225	26.4	11.3	0.9	chr3	24303259	24303369	(173992190)	+	MLT1H	LTR/ERVL-MaLR	63	186	(303)	2531668
261	26.8	1.3	18.2	chr3	24303384	24303575	(173991984)	+	MLT1H	LTR/ERVL-MaLR	262	420	(129)	2531668
13	23.8	2.2	2.1	chr3	24495068	24495113	(173800446)	+	(CCCCG)n	Simple_repeat	1	47	(0)	2531965
13	5.3	0.0	0.0	chr3	24495218	24495237	(173800322)	+	(GCG)n	Simple_repeat	1	20	(0)	2531966
16	15.2	6.5	2.0	chr3	24495301	24495346	(173800213)	+	(CCG)n	Simple_repeat	1	49	(0)	2531967
14	0.0	0.0	0.0	chr3	25664850	25664867	(172630692)	+	(GCC)n	Simple_repeat	1	18	(0)	2533626
891	20.2	3.0	0.0	chr3	28463686	28463848	(169831711)	+	AluJo	SINE/Alu	125	292	(20)	2537786
10800	10.8	3.2	0.1	chr3	29119095	29120625	(169174934)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2538722
2406	13.3	1.1	0.0	chr3	29120626	29120985	(169174574)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2538722
904	23.0	3.5	6.5	chr3	29121083	29121505	(169174054)	C	MLT1A	LTR/ERVL-MaLR	(0)	408	27	2538723
180	19.1	0.0	4.5	chr3	29280827	29280870	(169014689)	C	MamRTE1	LINE/RTE-BovB	(437)	3375	3334	2538964
2397	26.9	3.4	2.4	chr3	31471837	31472835	(166822724)	+	L2a	LINE/L2	2282	3296	(130)	2542152
2295	13.9	3.3	2.8	chr3	31472836	31473197	(166822362)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2542153
41	9.3	0.0	0.0	chr3	31980806	31980863	(166314696)	+	(CA)n	Simple_repeat	1	58	(0)	2542974
13	17.6	5.0	0.0	chr3	31980864	31980894	(166314665)	+	(CGCG)n	Simple_repeat	1	33	(0)	2542975
12	21.3	4.4	2.1	chr3	31981009	31981053	(166314506)	+	(GCC)n	Simple_repeat	1	47	(0)	2542976
18	7.8	0.0	0.0	chr3	31981114	31981140	(166314419)	+	(GCT)n	Simple_repeat	1	27	(0)	2542977
12	13.7	0.0	0.0	chr3	31981233	31981256	(166314303)	+	(GCT)n	Simple_repeat	1	24	(0)	2542978
17	11.2	0.0	0.0	chr3	31981315	31981343	(166314216)	+	(AGG)n	Simple_repeat	1	29	(0)	2542979
2301	9.5	7.7	1.5	chr3	32084912	32085252	(166210307)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2543170
24	19.1	3.2	1.5	chr3	33114003	33114065	(165181494)	+	(CCTT)n	Simple_repeat	1	65	(0)	2545324
26	14.1	2.9	4.3	chr3	33114562	33114629	(165180930)	+	(GCCCCG)n	Simple_repeat	1	70	(0)	2545325
278	30.2	8.0	0.8	chr3	33114709	33114835	(165180724)	+	MIRb	SINE/MIR	132	268	(0)	2545326
2389	10.9	3.9	2.8	chr3	33486598	33486957	(164808602)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2545946
2219	7.4	0.0	0.0	chr3	33717420	33717690	(164577869)	C	AluSg	SINE/Alu	(5)	305	35	2546318
2409	10.3	0.0	0.3	chr3	36667742	36668062	(161627497)	C	THE1B	LTR/ERVL-MaLR	(0)	364	45	2550225
8057	16.4	3.1	5.3	chr3	36668063	36668742	(161626817)	+	L1MC3	LINE/L1	6069	6729	(1056)	2550224
193	18.3	0.3	0.0	chr3	38084271	38084619	(160210940)	+	(TAG)n	Simple_repeat	1	350	(0)	2552504
18	17.6	3.6	3.5	chr3	38165766	38165820	(160129739)	+	(GGC)n	Simple_repeat	1	57	(0)	2552612
1136	30.9	3.3	3.0	chr3	39180055	39180693	(159114866)	C	L2a	LINE/L2	(139)	3287	2639	2554101
484	33.0	9.3	3.4	chr3	39181187	39181516	(159114043)	+	L2a	LINE/L2	3068	3422	(4)	2554103
2680	8.0	0.8	0.3	chr3	39756660	39757012	(158538547)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2554987
22	21.4	0.0	4.6	chr3	40309721	40309785	(157985774)	+	(CCT)n	Simple_repeat	1	65	(0)	2555737
643	17.0	14.5	0.6	chr3	41419048	41419213	(156876346)	+	L1ME2z	LINE/L1	6245	6437	(7)	2557450
316	28.6	6.2	0.0	chr3	41419220	41419324	(156876235)	C	L2a	LINE/L2	(375)	3044	2933	2557449
478	28.6	1.4	0.0	chr3	41419396	41419535	(156876024)	C	L2a	LINE/L2	(991)	2428	2287	2557449
2329	11.7	3.9	2.5	chr3	42883293	42883651	(155411908)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2559825
1040	29.7	6.6	1.7	chr3	43453865	43454461	(154841098)	C	L2a	LINE/L2	(0)	3375	2738	2560654
1917	27.7	13.4	0.9	chr3	43454554	43455344	(154840215)	C	L2a	LINE/L2	(1208)	2211	1307	2560654
13	25.5	0.0	0.0	chr3	43690981	43691017	(154604542)	+	(GCG)n	Simple_repeat	1	37	(0)	2560995
16	16.8	1.9	5.7	chr3	44510513	44510564	(153784995)	+	(CGCCCCG)n	Simple_repeat	1	53	(0)	2562222
331	31.3	2.2	1.5	chr3	44654299	44654431	(153641128)	+	MIRc	SINE/MIR	15	148	(120)	2562458
313	22.6	7.0	6.1	chr3	44654436	44654534	(153641025)	C	L2a	LINE/L2	(5)	3421	3322	2562459
281	24.3	3.6	2.7	chr3	45167630	45167739	(153127820)	C	LTR33	LTR/ERVL	(0)	515	405	2563358
16	0.0	0.0	0.0	chr3	45210765	45210782	(153084777)	+	(CT)n	Simple_repeat	1	18	(0)	2563443
16	16.8	0.0	0.0	chr3	45210793	45210820	(153084739)	+	(GT)n	Simple_repeat	1	28	(0)	2563444
324	26.9	11.9	0.7	chr3	45210923	45211064	(153084495)	+	MIR	SINE/MIR	28	187	(75)	2563445
713	0.0	0.0	0.0	chr3	45688998	45689071	(152606488)	C	tRNA-Arg-CGY_	tRNA	(2)	74	1	2564290
2271	15.3	3.3	12.9	chr3	46343983	46344493	(151951066)	C	LTR46	LTR/ERV1	(0)	460	1	2565260
2759	8.9	0.8	0.6	chr3	46344531	46344892	(151950667)	C	THE1B	LTR/ERVL-MaLR	(1)	363	1	2565261
2413	5.0	0.0	7.1	chr3	46583750	46584071	(151711488)	C	AluY	SINE/Alu	(12)	299	1	2565637
241	29.7	9.2	4.2	chr3	46584137	46584280	(151711279)	+	L1ME4a	LINE/L1	5797	5948	(176)	2565638
2216	7.5	13.2	0.0	chr3	47119453	47119760	(151175799)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2566452
15	26.8	0.0	0.0	chr3	47163892	47163936	(151131623)	+	(CTGCGG)n	Simple_repeat	1	45	(0)	2566541
36	0.0	2.4	2.4	chr3	47164013	47164053	(151131506)	+	(GCG)n	Simple_repeat	1	42	(0)	2566542
17	24.5	1.5	4.3	chr3	47164059	47164126	(151131433)	+	(TCCC)n	Simple_repeat	1	69	(0)	2566543
29	13.9	0.0	3.4	chr3	47475821	47475879	(150819680)	+	(GCG)n	Simple_repeat	1	59	(0)	2567225
13	18.8	0.0	5.0	chr3	47475977	47476016	(150819543)	+	(CGCCCTG)n	Simple_repeat	1	40	(0)	2567226
18	16.2	1.9	5.5	chr3	47476084	47476137	(150819422)	+	(GGCCG)n	Simple_repeat	1	55	(0)	2567227
1462	12.8	2.2	1.3	chr3	47476182	47476407	(150819152)	+	AluJo	SINE/Alu	2	229	(83)	2567228
20	18.0	3.3	3.2	chr3	48187990	48188049	(150107510)	+	(GCCGCC)n	Simple_repeat	1	62	(0)	2568895
17	8.3	7.9	0.0	chr3	49120805	49120842	(149174717)	+	(TCCGGT)n	Simple_repeat	1	41	(0)	2570688
12	12.0	0.0	6.5	chr3	50236139	50236169	(148059390)	+	(CGCCC)n	Simple_repeat	1	31	(0)	2572805
24	14.4	0.0	6.6	chr3	50236264	50236324	(148059235)	+	G-rich	Low_complexity	1	61	(0)	2572806
13	14.3	10.2	1.9	chr3	50236625	50236673	(148058886)	+	(CCCAGAC)n	Simple_repeat	1	54	(0)	2572807
23	23.6	4.7	3.6	chr3	50503295	50503400	(147792159)	+	G-rich	Low_complexity	1	111	(0)	2573122
29	16.5	5.3	1.2	chr3	50503439	50503514	(147792045)	+	(GCGGCG)n	Simple_repeat	1	80	(0)	2573123
15	12.6	3.7	0.0	chr3	50503690	50503721	(147791838)	+	(CT)n	Simple_repeat	1	33	(0)	2573124
70	0.0	0.0	0.0	chr3	50602055	50602114	(147693445)	+	(CA)n	Simple_repeat	1	60	(0)	2573272
36	4.9	0.0	0.0	chr3	51385311	51385352	(146910207)	+	(GGA)n	Simple_repeat	1	42	(0)	2574229
19	10.4	0.0	0.0	chr3	51385525	51385556	(146910003)	+	(GAGGGC)n	Simple_repeat	1	32	(0)	2574230
291	21.1	14.8	4.6	chr3	51538360	51538468	(146757091)	C	MIRb	SINE/MIR	(45)	223	102	2574562
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
14	17.3	5.1	0.0	chr3	51538872	51538910	(146756649)	+	(CGGCG)n	Simple_repeat	1	41	(0)	2574564
2625	9.0	0.0	8.0	chr3	51786693	51787078	(146508481)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2574966
35	29.2	1.4	2.8	chr3	52056422	52056562	(146238997)	+	(CCCG)n	Simple_repeat	1	143	(0)	2575386
271	24.6	4.4	0.0	chr3	52851730	52851794	(145443765)	C	L2c	LINE/L2	(0)	3387	3320	2576556
2332	7.1	0.0	0.3	chr3	52864948	52865243	(145430316)	C	AluSg7	SINE/Alu	(13)	296	2	2576578
11144	8.4	1.9	1.7	chr3	52865244	52865406	(145430153)	C	THE1A-int	LTR/ERVL-MaLR	(1415)	165	1	2576577
2035	11.7	1.8	1.5	chr3	52865411	52865740	(145429819)	C	THE1A	LTR/ERVL-MaLR	(24)	331	1	2576577
359	29.3	2.5	0.8	chr3	52865741	52865857	(145429702)	C	L1ME4b	LINE/L1	(52)	840	722	2576579
873	21.9	15.0	0.6	chr3	58487790	58488205	(139807354)	+	MLT1F2	LTR/ERVL-MaLR	40	560	(0)	2586115
2319	11.4	3.6	2.8	chr3	59582619	59582978	(138712581)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	2587723
190	33.8	2.5	7.5	chr3	61115460	61115673	(137179886)	C	L2	LINE/L2	(706)	2713	2511	2590030
779	29.3	9.3	8.9	chr3	61126154	61126313	(137169246)	C	L2a	LINE/L2	(1)	3425	3285	2590042
2172	11.8	4.7	1.6	chr3	61126314	61126682	(137168877)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2590043
779	31.8	8.9	5.7	chr3	61126683	61127285	(137168274)	C	L2a	LINE/L2	(142)	3284	2639	2590042
391	34.5	9.2	3.9	chr3	62591160	62591593	(135703966)	C	L2c	LINE/L2	(12)	3375	2917	2592511
29	0.0	0.0	0.0	chr3	63863798	63863824	(134431735)	+	(GCG)n	Simple_repeat	1	27	(0)	2594807
33	0.0	7.3	0.0	chr3	63863938	63863978	(134431581)	+	(GCC)n	Simple_repeat	1	44	(0)	2594808
14	14.6	0.0	3.1	chr3	63912111	63912142	(134383417)	+	(CGGA)n	Simple_repeat	1	32	(0)	2594888
35	0.0	0.0	0.0	chr3	63912685	63912716	(134382843)	+	(GCA)n	Simple_repeat	1	32	(0)	2594889
17	24.2	1.6	3.2	chr3	63912941	63913002	(134382557)	+	(CCTCCAC)n	Simple_repeat	1	63	(0)	2594890
180	28.6	13.2	9.9	chr3	65727701	65727882	(132567677)	C	L2b	LINE/L2	(5)	3421	3233	2597897
447	34.5	8.2	2.3	chr3	65728110	65728518	(132567041)	C	L2b	LINE/L2	(208)	3167	2736	2597897
11898	7.6	2.7	2.2	chr3	66421185	66422756	(131872803)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2599197
12521	9.6	0.2	0.1	chr3	68992099	68993676	(129301883)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2603287
2915	6.8	0.8	0.0	chr3	68993677	68994028	(129301531)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2603287
689	29.8	6.7	2.8	chr3	69690841	69691127	(128604432)	C	L2a	LINE/L2	(0)	3426	3128	2604628
2990	0.6	0.0	2.5	chr3	69691516	69691829	(128603730)	C	AluYa5	SINE/Alu	(5)	306	1	2604629
11379	9.6	0.6	0.8	chr3	70407240	70408823	(127886736)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2605780
2186	14.0	1.1	0.3	chr3	70408824	70409175	(127886384)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2605780
11217	9.8	1.0	2.0	chr3	70460794	70462389	(127833170)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2605827
2132	13.5	2.0	0.3	chr3	70462390	70462738	(127832821)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2605827
1214	31.6	4.0	4.3	chr3	70462739	70463088	(127832471)	+	L2a	LINE/L2	3089	3424	(2)	2605826
977	32.9	4.3	5.9	chr3	70673245	70673319	(127622240)	+	L2a	LINE/L2	2501	2575	(844)	2606134
2342	12.1	1.9	0.8	chr3	70673320	70673677	(127621882)	C	THE1B	LTR/ERVL-MaLR	(0)	364	3	2606137
977	33.5	6.2	3.9	chr3	70673678	70674491	(127621068)	+	L2a	LINE/L2	2576	3419	(7)	2606134
2010	15.7	5.8	4.5	chr3	70836048	70836406	(127459153)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2606356
12	22.1	0.0	0.0	chr3	71583359	71583390	(126712169)	+	GA-rich	Low_complexity	1	32	(0)	2607452
30	19.1	0.0	0.0	chr3	71583424	71583478	(126712081)	+	(T)n	Simple_repeat	1	55	(0)	2607453
13	22.1	0.0	0.0	chr3	71583468	71583499	(126712060)	+	(TTG)n	Simple_repeat	1	32	(0)	2607454
24	31.4	3.9	0.0	chr3	71583622	71583723	(126711836)	+	(CG)n	Simple_repeat	1	106	(0)	2607455
21	22.8	1.8	0.0	chr3	71583800	71583855	(126711704)	+	(GCG)n	Simple_repeat	1	57	(0)	2607456
18	18.1	0.0	0.0	chr3	71583980	71584011	(126711548)	+	(C)n	Simple_repeat	1	32	(0)	2607457
213	31.2	11.1	0.9	chr3	71663746	71663858	(126631701)	C	L2c	LINE/L2	(5)	3382	3257	2607606
41	4.5	0.0	0.0	chr3	71753648	71753693	(126541866)	+	(GCG)n	Simple_repeat	1	46	(0)	2607756
20	11.1	2.4	2.4	chr3	71754280	71754320	(126541239)	+	(GGC)n	Simple_repeat	1	42	(0)	2607757
792	22.9	24.5	0.8	chr3	71962679	71963069	(126332490)	+	LTR33	LTR/ERVL	2	515	(0)	2608168
1095	8.9	0.0	0.0	chr3	71963081	71963215	(126332344)	C	AluSx3	SINE/Alu	(5)	306	172	2608169
783	25.7	3.5	1.2	chr3	71972177	71972424	(126323135)	+	LTR16A1	LTR/ERVL	203	456	(0)	2608182
21291	5.8	2.3	0.2	chr3	71980600	71983185	(126312374)	C	HERVL-int	LTR/ERVL	(0)	5654	3014	2608210
340	27.6	8.9	1.6	chr3	72252204	72252328	(126043231)	C	MIRb	SINE/MIR	(112)	156	22	2608792
189	33.0	5.3	14.0	chr3	72252391	72252619	(126042940)	C	L2b	LINE/L2	(248)	3127	2920	2608793
2607	11.6	0.8	0.0	chr3	72252688	72253048	(126042511)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2608794
17	11.2	0.0	0.0	chr3	72887887	72887916	(125407643)	+	(AACG)n	Simple_repeat	1	30	(0)	2610135
17	6.3	5.7	2.7	chr3	72888033	72888067	(125407492)	+	(CCT)n	Simple_repeat	1	37	(0)	2610136
2670	11.9	0.8	0.3	chr3	73477719	73478080	(124817479)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2611238
3405	14.2	5.3	1.2	chr3	73478168	73478535	(124817024)	+	MER1A	DNA/hAT-Charlie	3	391	(138)	2611239
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
1262	31.9	11.3	0.5	chr3	75859256	75859901	(122435658)	+	L2	LINE/L2	916	1640	(1779)	2614783
18	27.6	1.2	4.7	chr3	77039727	77039811	(121255748)	+	(CCCCT)n	Simple_repeat	1	86	(0)	2616366
34	7.0	0.0	0.0	chr3	77040050	77040094	(121255465)	+	(CCCT)n	Simple_repeat	1	45	(0)	2616367
24	30.2	0.0	4.2	chr3	77042677	77042772	(121252787)	+	(CCCT)n	Simple_repeat	1	96	(0)	2616368
243	32.0	2.0	1.0	chr3	77043128	77043225	(121252334)	+	MIR3	SINE/MIR	105	203	(5)	2616369
41	4.8	0.0	0.0	chr3	77246317	77246360	(121049199)	+	(GT)n	Simple_repeat	1	44	(0)	2616621
1977	25.4	1.6	2.7	chr3	78085235	78085555	(120210004)	C	MLT2B3	LTR/ERVL	(109)	445	131	2617655
2273	9.3	4.2	3.2	chr3	78085556	78085932	(120209627)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2617656
13	17.6	2.4	4.7	chr3	79018824	79018865	(119276694)	+	(GCG)n	Simple_repeat	1	43	(0)	2618941
199	30.4	11.3	5.2	chr3	79150709	79150899	(119144660)	+	L2a	LINE/L2	2373	2576	(843)	2619091
2287	12.2	2.8	0.6	chr3	79150915	79151268	(119144291)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	2619092
690	36.2	10.0	5.7	chr3	79151320	79152164	(119143395)	+	L2a	LINE/L2	2544	3418	(8)	2619091
2221	12.6	1.4	0.6	chr3	81907144	81907495	(116388064)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2622742
10801	10.9	1.6	0.1	chr3	83755180	83756731	(114538828)	+	THE1A-int	LTR/ERVL-MaLR	4	1580	(0)	2624943
2167	13.9	0.8	1.1	chr3	83756732	83757087	(114538472)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2624943
4596	23.8	5.4	2.4	chr3	83757088	83757901	(114537658)	C	L1MB3	LINE/L1	(1707)	5040	4209	2624940
10203	12.4	2.4	1.9	chr3	84216175	84216558	(114079001)	C	THE1A-int	LTR/ERVL-MaLR	(1205)	375	1	2625491
2431	10.6	1.4	0.3	chr3	84216559	84216909	(114078650)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2625491
14686	17.8	1.8	1.5	chr3	84216910	84219396	(114076163)	+	L1PA15	LINE/L1	3152	5635	(1038)	2625490
8088	11.2	0.3	0.5	chr3	84900631	84901818	(113393741)	+	THE1A-int	LTR/ERVL-MaLR	348	1580	(0)	2626331
2251	13.1	0.6	2.5	chr3	84901819	84902179	(113393380)	+	THE1A	LTR/ERVL-MaLR	1	354	(1)	2626331
36	25.1	0.0	1.0	chr3	84958994	84959090	(113336469)	+	(GCCGCC)n	Simple_repeat	1	97	(0)	2626424
1766	18.2	4.8	4.4	chr3	85892743	85893247	(112402312)	+	THE1B-int	LTR/ERVL-MaLR	19	511	(1069)	2627613
7472	3.7	0.1	0.0	chr3	85893249	85894494	(112401065)	+	L1PA4	LINE/L1	4894	6140	(15)	2627614
2008	13.1	9.9	0.3	chr3	86718116	86718444	(111577115)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2628603
10942	11.8	0.4	0.2	chr3	86862184	86863758	(111431801)	+	THE1A-int	LTR/ERVL-MaLR	2	1580	(0)	2628777
2130	14.8	0.8	0.3	chr3	86863759	86864111	(111431448)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2628777
465	34.0	1.5	0.5	chr3	86864150	86864353	(111431206)	C	L1M1	LINE/L1	(6305)	1184	979	2628774
1345	19.8	2.3	2.8	chr3	86864349	86864702	(111430857)	C	L1M4	LINE/L1	(831)	5315	4964	2628778
330	32.7	1.9	4.3	chr3	87518225	87518387	(110777172)	C	LTR16D	LTR/ERVL	(12)	639	481	2629637
2651	9.6	0.3	0.0	chr3	87518452	87518805	(110776754)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2629638
11046	10.7	2.0	0.0	chr3	87518806	87520353	(110775206)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2629638
15	14.5	5.0	2.4	chr3	88059213	88059252	(110236307)	+	GA-rich	Low_complexity	1	42	(0)	2630312
13	0.0	0.0	0.0	chr3	88059269	88059285	(110236274)	+	(CGG)n	Simple_repeat	1	17	(0)	2630313
20	23.6	0.0	0.0	chr3	88059419	88059468	(110236091)	+	(GGC)n	Simple_repeat	1	50	(0)	2630314
16012	15.0	3.7	4.2	chr3	88779383	88779566	(109515993)	+	L1M1	LINE/L1	5640	5813	(1752)	2631236
1868	15.9	3.2	2.4	chr3	88779567	88779940	(109515619)	C	THE1D	LTR/ERVL-MaLR	(4)	377	1	2631238
1903	15.9	2.9	2.1	chr3	88866152	88866523	(109429036)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2631344
2080	11.5	0.0	1.1	chr3	93841450	93841766	(104453793)	C	AluSg	SINE/Alu	(0)	310	1	2633421
1880	13.8	5.1	0.0	chr3	93981600	93981895	(104313664)	+	AluJb	SINE/Alu	1	312	(0)	2633636
2210	12.6	1.7	0.8	chr3	94007413	94007764	(104287795)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2633693
6252	9.8	1.3	0.1	chr3	96888485	96889335	(101406224)	C	THE1A-int	LTR/ERVL-MaLR	(719)	861	1	2637134
1904	17.0	2.2	0.6	chr3	96889336	96889684	(101405875)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2637134
2136	10.8	5.9	1.8	chr3	97377108	97377447	(100918112)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2637731
11360	10.4	1.2	0.1	chr3	97377448	97379009	(100916550)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2637731
11446	10.8	1.2	0.9	chr3	97708019	97709638	(100585921)	+	THE1D-int	LTR/ERVL-MaLR	1	1625	(6)	2638144
1816	16.6	5.2	2.2	chr3	97709644	97710012	(100585547)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2638144
306	32.5	15.2	7.0	chr3	98732872	98733255	(99562304)	C	L1M4b	LINE/L1	(6205)	662	242	2639384
10309	13.1	1.2	3.5	chr3	99398102	99399768	(98895791)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	2640200
20	8.4	5.3	0.0	chr3	99876079	99876116	(98419443)	+	(GCCGGG)n	Simple_repeat	1	40	(0)	2640829
18	29.8	0.0	0.0	chr3	99876246	99876302	(98419257)	+	(GCG)n	Simple_repeat	1	57	(0)	2640830
3944	16.7	5.2	1.6	chr3	99994233	99994639	(98300920)	+	L1M2	LINE/L1	2484	2893	(3250)	2641021
2359	9.4	4.5	0.3	chr3	99994640	99994979	(98300580)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2641022
11598	10.8	0.3	0.4	chr3	100469290	100470862	(97824697)	C	THE1B-int	LTR/ERVL-MaLR	(8)	1572	1	2641778
2271	13.0	4.9	1.7	chr3	100470863	100471214	(97824345)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2641778
2421	11.1	1.9	2.5	chr3	101028331	101028690	(97266869)	C	THE1B	LTR/ERVL-MaLR	(0)	364	7	2642470
410	23.8	6.2	0.0	chr3	101028698	101028802	(97266757)	+	L1M5	LINE/L1	4969	5080	(1066)	2642469
2807	7.1	0.3	0.0	chr3	101085238	101085591	(97209968)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2642549
902	18.8	2.8	1.1	chr3	101085592	101085767	(97209792)	+	AluJo	SINE/Alu	109	287	(25)	2642550
1497	6.2	0.5	0.0	chr3	101132822	101133015	(97162544)	+	MER107	DNA/hAT-Charlie	6	200	(0)	2642619
2656	8.0	1.1	0.0	chr3	101133169	101133517	(97162042)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	2642620
12	13.5	0.0	7.9	chr3	101133547	101133584	(97161975)	+	(CACAAC)n	Simple_repeat	1	38	(0)	2642621
2379	13.0	2.0	5.5	chr3	101550356	101550606	(96744953)	+	MER50B	LTR/ERV1	168	413	(284)	2643154
1295	16.8	3.1	1.8	chr3	101550607	101550830	(96744729)	+	THE1B	LTR/ERVL-MaLR	1	227	(137)	2643157
252	11.4	0.0	0.0	chr3	101550833	101550867	(96744692)	+	AluSx	SINE/Alu	51	85	(217)	2643158
29	3.2	0.0	0.0	chr3	101550871	101550902	(96744657)	+	(CCCTCC)n	Simple_repeat	1	32	(0)	2643159
9005	6.1	0.1	16.1	chr3	101550905	101552496	(96743063)	+	SVA_A	Retroposon/SVA	51	1387	(0)	2643160
2019	10.8	7.4	2.2	chr3	101897283	101897642	(96397917)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	2643776
2727	17.0	3.1	3.8	chr3	101897643	101897940	(96397619)	C	L1MB8	LINE/L1	(455)	5723	5426	2643775
1230	25.9	6.9	3.6	chr3	101948817	101948967	(96346592)	+	LTR16	LTR/ERVL	1	160	(278)	2643846
2422	11.9	2.8	1.4	chr3	101948968	101949326	(96346233)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2643847
1230	25.9	6.9	3.6	chr3	101949327	101949594	(96345965)	+	LTR16	LTR/ERVL	161	435	(3)	2643846
2646	10.3	0.0	0.0	chr3	102723503	102723852	(95571707)	+	THE1A	LTR/ERVL-MaLR	1	350	(5)	2644941
11154	10.6	1.8	0.0	chr3	102723855	102725406	(95570153)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2644941
2727	9.0	0.0	0.0	chr3	102725407	102725761	(95569798)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2644941
12	12.6	0.0	3.6	chr3	105366332	105366359	(92929200)	+	(TCCTT)n	Simple_repeat	1	28	(0)	2648179
11	18.1	2.4	4.8	chr3	105366741	105366781	(92928778)	+	G-rich	Low_complexity	1	42	(0)	2648180
20	28.7	2.8	0.0	chr3	105366924	105366995	(92928564)	+	(CCG)n	Simple_repeat	1	74	(0)	2648181
270	29.2	2.2	2.2	chr3	105476668	105476758	(92818801)	+	L2	LINE/L2	2506	2596	(823)	2648314
2758	7.3	0.0	0.6	chr3	105476815	105477171	(92818388)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2648318
1826	13.9	8.7	2.0	chr3	106042467	106042819	(92252740)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	2649026
31	0.0	0.0	0.0	chr3	107523219	107523247	(90772312)	+	(GCG)n	Simple_repeat	1	29	(0)	2651001
22	22.9	1.6	1.6	chr3	108090911	108090973	(90204586)	+	(CCG)n	Simple_repeat	1	64	(0)	2651800
2244	13.3	0.6	1.1	chr3	109904833	109905189	(88390370)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2654574
19	29.8	1.2	2.4	chr3	111071764	111071844	(87223715)	+	(GGC)n	Simple_repeat	1	82	(0)	2656044
21	22.7	0.0	0.0	chr3	111071965	111072015	(87223544)	+	G-rich	Low_complexity	1	51	(0)	2656045
16	14.7	0.0	0.0	chr3	111072131	111072160	(87223399)	+	(GCT)n	Simple_repeat	1	30	(0)	2656046
14	12.9	2.8	2.7	chr3	111072372	111072407	(87223152)	+	(GCCCGCG)n	Simple_repeat	1	37	(0)	2656047
20	25.1	3.1	5.0	chr3	113212133	113212230	(85083329)	+	G-rich	Low_complexity	1	101	(0)	2658909
2360	9.6	0.3	1.3	chr3	113838290	113838592	(84456967)	+	AluSq2	SINE/Alu	1	300	(13)	2659864
22	10.0	4.7	0.0	chr3	113838845	113838887	(84456672)	+	(GGTGC)n	Simple_repeat	1	45	(0)	2659865
18637	11.1	4.2	2.9	chr3	114270939	114271501	(84024058)	C	L1PB1	LINE/L1	(5567)	1296	782	2660549
2246	13.1	0.8	1.4	chr3	114271502	114271858	(84023701)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2660552
18637	11.1	4.2	2.9	chr3	114271859	114272616	(84022943)	C	L1PB1	LINE/L1	(6082)	781	3	2660549
2584	8.4	2.5	0.0	chr3	115598680	115599025	(82696534)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2662336
2506	11.7	0.8	1.1	chr3	118860752	118861107	(79434452)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2666797
7701	11.8	3.4	0.7	chr3	118861108	118863081	(79432478)	C	L1MA2	LINE/L1	(24)	7699	5615	2666796
749	26.9	5.4	0.0	chr3	119259800	119260026	(79035533)	C	L1MC4	LINE/L1	(421)	7621	7382	2667287
548	24.9	6.1	3.6	chr3	119260162	119260353	(79035206)	+	MLT1B	LTR/ERVL-MaLR	387	583	(8)	2667286
550	25.4	6.5	8.3	chr3	119260376	119260688	(79034871)	+	L1MC4	LINE/L1	7736	8042	(0)	2667283
17	5.4	4.3	8.3	chr3	119322570	119322615	(78972944)	+	(CTCCCAC)n	Simple_repeat	1	48	(0)	2667374
12	14.7	3.3	0.0	chr3	119322765	119322794	(78972765)	+	(GCTCCT)n	Simple_repeat	1	31	(0)	2667375
16	6.5	5.9	2.8	chr3	120093888	120093921	(78201638)	+	G-rich	Low_complexity	1	36	(0)	2668615
12	8.8	4.2	0.0	chr3	120094347	120094370	(78201189)	+	(TCCT)n	Simple_repeat	1	25	(0)	2668616
19	0.0	0.0	0.0	chr3	120094385	120094408	(78201151)	+	(GGC)n	Simple_repeat	1	24	(0)	2668617
19	18.3	0.0	5.5	chr3	120094480	120094485	(78201074)	+	(TCCCCC)n	Simple_repeat	1	54	(0)	2668618
22	11.7	4.2	2.0	chr3	120094486	120094533	(78201026)	+	(CTC)n	Simple_repeat	1	50	(0)	2668619
2379	8.4	1.4	0.3	chr3	120104300	120104644	(78190915)	+	THE1A	LTR/ERVL-MaLR	7	355	(0)	2668636
277	32.5	8.6	0.0	chr3	120104675	120104791	(78190768)	C	MIRc	SINE/MIR	(20)	248	121	2668637
1801	16.7	3.6	0.0	chr3	120104796	120105089	(78190470)	+	AluJb	SINE/Alu	2	306	(6)	2668638
1987	13.3	5.9	5.4	chr3	120153994	120154166	(78141393)	C	THE1C	LTR/ERVL-MaLR	(0)	375	208	2668742
31	3.3	0.0	0.0	chr3	120154167	120154197	(78141362)	+	(AG)n	Simple_repeat	1	31	(0)	2668743
1987	13.3	5.9	5.4	chr3	120154198	120154396	(78141163)	C	THE1C	LTR/ERVL-MaLR	(168)	207	1	2668742
13	5.2	0.0	0.0	chr3	120349090	120349109	(77946450)	+	(GCA)n	Simple_repeat	1	20	(0)	2669018
1162	15.4	0.6	0.5	chr3	120508011	120508220	(77787339)	+	MER50-int	LTR/ERV1	1004	1177	(3703)	2669260
6096	18.6	6.0	2.6	chr3	120508216	120509488	(77786071)	+	MER50-int	LTR/ERV1	3225	4543	(2662)	2669260
30738	21.4	2.0	1.1	chr3	121070693	121077115	(77218444)	C	HERV1_I-int	LTR/ERV1	(1738)	7063	580	2670006
18795	13.4	1.8	3.1	chr3	121961860	121961916	(76333643)	+	L1PA12	LINE/L1	561	617	(6924)	2671276
2756	9.6	0.0	0.0	chr3	121961917	121962271	(76333288)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2671277
13	18.2	0.0	0.0	chr3	122795234	122795264	(75500295)	+	G-rich	Low_complexity	1	31	(0)	2672621
15	17.6	0.0	0.0	chr3	122795282	122795313	(75500246)	+	(GGC)n	Simple_repeat	1	32	(0)	2672622
14	10.3	2.9	5.6	chr3	122795341	122795375	(75500184)	+	(GCT)n	Simple_repeat	1	36	(0)	2672623
1985	12.6	0.0	3.6	chr3	125350162	125350462	(72945097)	C	AluSz	SINE/Alu	(14)	298	9	2676833
841	20.6	2.8	5.4	chr3	125350463	125350504	(72945055)	+	L1MB1	LINE/L1	5666	5707	(461)	2676832
1688	17.1	2.9	3.2	chr3	125350505	125350819	(72944740)	C	MER1B	DNA/hAT-Charlie	(0)	339	26	2676834
17	21.1	1.7	4.9	chr3	126475748	126475807	(71819752)	+	(GGCGG)n	Simple_repeat	1	61	(0)	2678640
718	31.1	6.2	4.8	chr3	126674958	126675390	(71620169)	+	MLT1K	LTR/ERVL-MaLR	155	593	(2)	2678915
3441	22.5	5.4	4.7	chr3	127290451	127291427	(71004132)	C	L1MC3	LINE/L1	(10)	7872	6904	2679802
2211	12.0	3.8	4.6	chr3	127291428	127291794	(71003765)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2679803
1266	28.1	8.4	9.2	chr3	127291795	127291881	(71003678)	C	L1MC3	LINE/L1	(979)	6903	6834	2679802
1720	23.1	5.4	3.2	chr3	127291870	127292137	(71003422)	C	L1ME2	LINE/L1	(757)	5426	5143	2679801
2185	10.6	0.0	0.0	chr3	127696397	127696713	(70598846)	C	AluSx1	SINE/Alu	(0)	312	1	2680516
2506	8.1	13.9	22.3	chr3	128152657	128153231	(70142328)	C	LTR12F	LTR/ERV1	(0)	519	1	2681287
15	17.6	1.7	8.2	chr3	128153460	128153519	(70142040)	+	G-rich	Low_complexity	1	61	(0)	2681288
14	4.0	3.3	6.5	chr3	128153493	128153522	(70142037)	+	(GGC)n	Simple_repeat	1	31	(0)	2681289
18	19.4	0.0	0.0	chr3	128153711	128153751	(70141808)	+	(GCCCGA)n	Simple_repeat	1	41	(0)	2681290
244	32.6	6.0	2.5	chr3	129358971	129359200	(68936359)	C	L2c	LINE/L2	(175)	3212	2972	2683597
897	23.3	7.4	8.6	chr3	129440684	129441124	(68854435)	C	MER113	DNA/hAT-Charlie	(35)	486	52	2683754
790	22.3	3.9	7.1	chr3	129840345	129840531	(68455028)	+	L1MCa	LINE/L1	2634	2812	(3752)	2684489
1835	13.4	8.8	1.1	chr3	129840532	129840879	(68454680)	+	THE1D	LTR/ERVL-MaLR	1	377	(4)	2684496
9677	16.9	3.0	2.5	chr3	129930386	129930855	(68364704)	C	L1M4	LINE/L1	(6188)	1329	863	2684693
1805	14.9	8.5	1.4	chr3	129930856	129931203	(68364356)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2684698
9677	16.9	3.0	2.5	chr3	129931204	129932034	(68363525)	C	L1M4	LINE/L1	(6655)	862	17	2684693
60161	6.7	0.4	0.6	chr3	130141409	130149230	(68146329)	C	HERVE-int	LTR/ERV1	(2)	7811	3	2685084
11678	8.7	1.5	0.1	chr3	130863945	130865502	(67430057)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2686116
2551	9.9	0.8	0.0	chr3	130865503	130865854	(67429705)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2686116
2683	8.8	0.6	0.0	chr3	131756745	131757097	(66538462)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2687395
11	27.7	0.0	0.0	chr3	132660552	132660590	(65634969)	+	(GGAGCG)n	Simple_repeat	1	39	(0)	2688747
8707	15.5	1.0	3.9	chr3	133010434	133010608	(65284951)	+	MSTA-int	LTR/ERVL-MaLR	545	709	(922)	2689282
2732	8.5	0.8	0.0	chr3	133010609	133010960	(65284599)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2689284
11514	9.5	0.5	2.1	chr3	133010961	133012564	(65282995)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	3	2689284
2556	9.4	1.1	1.1	chr3	133012569	133012922	(65282637)	C	THE1A	LTR/ERVL-MaLR	(1)	354	1	2689285
8707	15.5	1.0	3.9	chr3	133012923	133013560	(65281999)	+	MSTA-int	LTR/ERVL-MaLR	710	1318	(313)	2689282
180	37.0	3.6	0.0	chr3	133097935	133098015	(65197544)	+	X6A_LINE	LINE/CR1	618	701	(379)	2689413
2591	10.1	0.0	0.0	chr3	133098074	133098428	(65197131)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2689414
11847	8.5	1.3	0.2	chr3	133098429	133099989	(65195570)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	2	2689414
2420	9.2	4.5	0.0	chr3	133099992	133100329	(65195230)	C	THE1A	LTR/ERVL-MaLR	(1)	354	1	2689414
1722	17.7	0.0	1.7	chr3	133100331	133100618	(65194941)	+	AluJb	SINE/Alu	14	296	(16)	2689415
28	32.0	1.8	7.0	chr3	135405000	135405027	(62890532)	+	(ACACAT)n	Simple_repeat	142	227	(0)	2692825
593	27.9	1.8	2.4	chr3	135405029	135405197	(62890362)	C	MIR	SINE/MIR	(84)	178	11	2692827
2672	9.0	0.3	0.0	chr3	135405258	135405611	(62889948)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2692828
11885	8.8	0.3	0.1	chr3	135405616	135407187	(62888372)	C	THE1A-int	LTR/ERVL-MaLR	(4)	1576	1	2692828
308	28.7	0.9	6.5	chr3	135965088	135965210	(62330349)	+	L1ME3B	LINE/L1	6127	6242	(0)	2693589
16	32.0	0.0	1.7	chr3	135965369	135965428	(62330131)	+	(AACAAT)n	Simple_repeat	1	60	(0)	2693590
12	11.1	3.2	3.1	chr3	135965575	135965605	(62329954)	+	G-rich	Low_complexity	1	32	(0)	2693591
333	32.5	11.8	5.3	chr3	135965611	135965668	(62329891)	C	L1MEc	LINE/L1	(6337)	530	465	2693576
28	3.3	0.0	0.0	chr3	135965669	135965699	(62329860)	+	(GAG)n	Simple_repeat	1	31	(0)	2693592
333	32.5	11.8	5.3	chr3	135965700	135965939	(62329620)	C	L1MEc	LINE/L1	(6403)	464	210	2693576
17	17.2	4.2	2.0	chr3	135965941	135965988	(62329571)	+	(GGCCG)n	Simple_repeat	1	50	(0)	2693593
18	4.0	0.0	0.0	chr3	135966037	135966062	(62329497)	+	(CGGTG)n	Simple_repeat	1	26	(0)	2693594
2182	11.2	0.0	0.0	chr3	136181637	136181921	(62113638)	+	AluSx1	SINE/Alu	1	285	(27)	2693911
11	22.5	2.2	4.3	chr3	136195597	136195642	(62099917)	+	(GGCGGC)n	Simple_repeat	1	47	(0)	2693943
15	5.8	10.5	2.4	chr3	136751804	136751841	(61543718)	+	G-rich	Low_complexity	1	42	(0)	2695002
13	9.8	9.1	0.0	chr3	136752057	136752089	(61543470)	+	(GCTC)n	Simple_repeat	1	36	(0)	2695003
2222	13.4	1.1	0.8	chr3	137584783	137585136	(60710423)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2696284
11818	8.7	0.9	0.0	chr3	137585137	137586700	(60708859)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	2	2696284
2311	10.1	2.5	0.9	chr3	137586702	137587050	(60708509)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2696284
12	17.1	2.9	2.8	chr3	138608976	138609010	(59686549)	+	(CGCC)n	Simple_repeat	1	36	(0)	2697787
13	22.5	2.3	2.3	chr3	138609063	138609105	(59686454)	+	(GCG)n	Simple_repeat	1	44	(0)	2697788
19	10.8	2.3	4.4	chr3	138609240	138609284	(59686275)	+	G-rich	Low_complexity	1	44	(0)	2697789
271	27.1	9.2	0.8	chr3	138609349	138609478	(59686081)	C	L1ME4a	LINE/L1	(16)	6108	5967	2697790
95	3.0	0.0	2.8	chr3	138609534	138609641	(59685918)	+	(CT)n	Simple_repeat	1	108	(0)	2697791
18	17.6	6.7	0.0	chr3	138834892	138834936	(59460623)	+	(GC)n	Simple_repeat	1	48	(0)	2698265
19	4.0	0.0	0.0	chr3	138835008	138835033	(59460526)	+	(GCG)n	Simple_repeat	1	26	(0)	2698266
609	27.8	6.5	6.5	chr3	139831323	139831614	(58463945)	C	L2a	LINE/L2	(0)	3426	3135	2699936
13	34.2	0.0	0.0	chr3	141051089	141051141	(57244418)	+	(GAGT)n	Simple_repeat	1	53	(0)	2701694
24	15.8	0.0	3.8	chr3	141051386	141051438	(57244121)	+	(GGC)n	Simple_repeat	1	53	(0)	2701695
21	18.3	6.5	0.0	chr3	141402473	141402534	(56893025)	+	(CGCGG)n	Simple_repeat	1	66	(0)	2702240
203	27.3	9.4	3.8	chr3	141533368	141533447	(56762112)	+	MIR3	SINE/MIR	60	144	(64)	2702449
2794	6.8	0.6	0.0	chr3	141536100	141536452	(56759107)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2702455
354	28.8	7.5	2.0	chr3	141737830	141738029	(56557530)	C	L2a	LINE/L2	(0)	3426	3165	2702770
14	19.9	4.2	2.0	chr3	141738676	141738723	(56556836)	+	(GCTGCG)n	Simple_repeat	1	50	(0)	2702771
13	11.6	2.2	8.7	chr3	142225686	142225730	(56069829)	+	(CAGCCGC)n	Simple_repeat	1	46	(0)	2703768
2437	5.8	0.3	0.0	chr3	142225760	142226051	(56069508)	C	AluSg	SINE/Alu	(16)	294	2	2703769
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
2432	9.7	1.4	0.3	chr3	142700741	142701091	(55594468)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2704571
12	21.8	2.7	0.0	chr3	142963494	142963530	(55332029)	+	A-rich	Low_complexity	1	38	(0)	2704980
26	13.8	4.3	4.2	chr3	142963601	142963669	(55331890)	+	(CGG)n	Simple_repeat	1	72	(0)	2704981
13	9.8	0.0	0.0	chr3	142963695	142963716	(55331843)	+	(GCC)n	Simple_repeat	1	22	(0)	2704982
2009	10.7	1.8	0.7	chr3	143250124	143250403	(55045156)	+	AluSx4	SINE/Alu	17	299	(11)	2705417
904	26.5	8.0	4.2	chr3	143250404	143250421	(55045138)	C	Charlie25	DNA/hAT-Charlie	(1298)	1226	1219	2705413
2710	8.8	0.3	0.3	chr3	143250422	143250776	(55044783)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2705418
904	26.5	8.0	4.2	chr3	143250777	143250935	(55044624)	C	Charlie25	DNA/hAT-Charlie	(1306)	1218	1053	2705413
14	26.8	3.2	6.1	chr3	143971700	143971794	(54323765)	+	(CCGCTC)n	Simple_repeat	1	98	(0)	2706423
15	16.6	0.0	0.0	chr3	143971976	143972002	(54323557)	+	(GC)n	Simple_repeat	1	27	(0)	2706424
564	18.2	19.9	2.9	chr3	144018958	144019094	(54276465)	C	FRAM	SINE/Alu	(10)	166	1	2706494
2520	11.9	0.3	0.0	chr3	144019095	144019448	(54276111)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2706495
11082	11.8	0.8	0.2	chr3	144019449	144021005	(54274554)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	14	2706495
2118	12.9	4.2	0.3	chr3	144118531	144118871	(54176688)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2706639
11109	11.5	0.5	0.1	chr3	144714687	144716254	(53579305)	C	THE1A-int	LTR/ERVL-MaLR	(7)	1573	1	2707431
2273	11.8	1.4	0.8	chr3	144716257	144716607	(53578952)	C	THE1A	LTR/ERVL-MaLR	(2)	353	1	2707431
1738	16.3	7.3	0.2	chr3	144716608	144717012	(53578547)	+	L1MA8	LINE/L1	2948	3383	(2760)	2707427
12048	18.1	5.1	8.3	chr3	146312177	146312323	(51983236)	C	L1MA9	LINE/L1	(2467)	5095	4955	2709418
1924	15.1	5.8	1.6	chr3	146312324	146312686	(51982873)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	2709420
12048	18.1	5.1	8.3	chr3	146312687	146313104	(51982455)	C	L1MA9	LINE/L1	(2608)	4954	4526	2709418
662	34.8	5.6	7.3	chr3	146677008	146677165	(51618394)	+	L2a	LINE/L2	2908	3090	(336)	2709887
2028	13.0	5.2	1.6	chr3	146677166	146677532	(51618027)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2709888
10782	10.2	3.0	0.1	chr3	146686057	146686373	(51609186)	C	THE1A-int	LTR/ERVL-MaLR	(1262)	318	2	2709894
2558	9.9	0.3	0.6	chr3	146686374	146686727	(51608832)	C	THE1A	LTR/ERVL-MaLR	(0)	355	3	2709894
1058	23.5	14.8	2.2	chr3	148910838	148911242	(49384317)	+	Kanga1	DNA/TcMar-Tc2	1278	1742	(3)	2712736
1245	29.6	7.2	3.5	chr3	148911252	148911654	(49383905)	C	LTR33B	LTR/ERVL	(84)	419	1	2712737
15	20.2	4.8	4.6	chr3	148991651	148991712	(49303847)	+	(CCG)n	Simple_repeat	1	65	(0)	2712870
2036	12.5	0.8	10.0	chr3	149113503	149113893	(49181666)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2713084
8931	11.0	7.1	3.9	chr3	149113894	149114371	(49181188)	C	LOR1-int	LTR/ERV1	(7375)	745	216	2713077
3065	17.5	2.6	0.9	chr3	149697620	149698149	(48597410)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1113	2714067
2407	11.1	4.0	1.6	chr3	149698151	149698516	(48597043)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2714069
2953	16.4	0.5	3.5	chr3	149802209	149802578	(48492981)	C	L1M3	LINE/L1	(1690)	4450	4091	2714239
2263	13.3	0.8	0.8	chr3	149802579	149802933	(48492626)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2714240
2953	16.4	0.5	3.5	chr3	149802934	149803169	(48492390)	C	L1M3	LINE/L1	(2050)	4090	3862	2714239
787	26.4	2.3	3.0	chr3	149898438	149898699	(48396860)	+	MIR	SINE/MIR	3	262	(0)	2714393
1736	29.1	5.4	7.3	chr3	149898700	149899163	(48396396)	C	L2a	LINE/L2	(112)	3314	2865	2714392
2081	12.1	0.0	1.4	chr3	149899164	149899452	(48396107)	+	AluSx3	SINE/Alu	1	285	(26)	2714394
36	16.3	3.1	4.0	chr3	149970880	149970975	(48324584)	+	(GCG)n	Simple_repeat	1	99	(0)	2714495
13	9.6	0.0	0.0	chr3	149971187	149971209	(48324350)	+	(GCGT)n	Simple_repeat	1	23	(0)	2714496
30	24.7	1.2	0.0	chr3	150408250	150408330	(47887229)	+	(CGG)n	Simple_repeat	1	82	(0)	2715186
15	17.7	0.0	0.0	chr3	150546396	150546427	(47749132)	+	(CGC)n	Simple_repeat	1	32	(0)	2715401
1732	16.3	8.5	1.1	chr3	151064764	151064945	(47230614)	+	THE1C	LTR/ERVL-MaLR	1	202	(173)	2716279
34	6.3	4.0	0.0	chr3	151064946	151064995	(47230564)	+	(TC)n	Simple_repeat	1	52	(0)	2716280
1732	16.3	8.5	1.1	chr3	151064996	151065159	(47230400)	+	THE1C	LTR/ERVL-MaLR	203	375	(0)	2716279
16	0.0	0.0	0.0	chr3	151086481	151086497	(47209062)	+	(T)n	Simple_repeat	1	17	(0)	2716326
15	9.2	8.6	0.0	chr3	151086804	151086838	(47208721)	+	(AGCG)n	Simple_repeat	1	38	(0)	2716327
2117	13.3	3.1	1.3	chr3	151725206	151725579	(46569980)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2717182
13	16.3	5.7	0.0	chr3	152269709	152269743	(46025816)	+	(CTT)n	Simple_repeat	1	37	(0)	2717974
2287	11.4	3.9	2.8	chr3	153148681	153149040	(45146519)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2719327
5994	16.3	2.2	3.5	chr3	153515516	153517636	(44777923)	C	L1MA4	LINE/L1	(6)	7713	5618	2719897
1986	15.5	1.7	1.7	chr3	153517637	153517991	(44777568)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2719898
8684	10.5	2.5	0.0	chr3	153517992	153519179	(44776380)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	362	2719898
13539	8.0	0.4	0.6	chr3	153989527	153991422	(44304137)	+	L1PB1	LINE/L1	4199	6089	(773)	2720520
2280	12.5	0.6	1.1	chr3	153991425	153991781	(44303778)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2720522
10890	11.4	1.5	0.9	chr3	153991782	153993346	(44302213)	+	THE1A-int	LTR/ERVL-MaLR	1	1574	(6)	2720522
17	24.3	0.0	2.0	chr3	154324260	154324309	(43971250)	+	(GCC)n	Simple_repeat	1	50	(0)	2721014
2081	15.2	3.5	1.6	chr3	155053272	155053639	(43241920)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2721970
897	27.2	6.0	4.2	chr3	155053640	155054004	(43241555)	+	MLT1C-int	LTR/ERVL-MaLR	876	1223	(266)	2721967
1411	23.6	2.0	10.0	chr3	155451454	155452061	(42843498)	+	MLT2B4	LTR/ERVL	163	689	(28)	2722518
2342	10.3	1.7	1.1	chr3	155452062	155452414	(42843145)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2722519
320	27.7	5.5	0.8	chr3	155869965	155870084	(42425475)	C	MamRep1879	DNA/hAT-Tip100?	(85)	131	6	2723193
14	14.1	0.0	3.0	chr3	155870486	155870520	(42425039)	+	G-rich	Low_complexity	1	33	(0)	2723194
14	28.2	0.0	4.6	chr3	155870798	155870862	(42424697)	+	(CCGTC)n	Simple_repeat	1	65	(0)	2723195
12	17.5	3.1	0.0	chr3	155870839	155870870	(42424689)	+	(CCGGCC)n	Simple_repeat	1	33	(0)	2723196
2577	11.3	0.6	0.3	chr3	156496234	156496596	(41798963)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2724114
2486	10.1	2.0	0.0	chr3	156562517	156562864	(41732695)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2724206
276	25.6	6.8	0.0	chr3	156566974	156567055	(41728504)	C	MLT1K	LTR/ERVL-MaLR	(125)	470	383	2724218
2551	10.7	0.3	0.0	chr3	156567077	156567430	(41728129)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2724219
11534	9.8	0.4	0.3	chr3	156567431	156569009	(41726550)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2724219
267	13.5	0.0	0.0	chr3	156620161	156620197	(41675362)	C	MER3	DNA/hAT-Charlie	(126)	83	47	2724311
378	22.1	4.6	2.8	chr3	156620256	156620362	(41675197)	C	MIR	SINE/MIR	(6)	256	148	2724312
2283	13.9	7.6	0.0	chr3	156620366	156620695	(41674864)	+	LTR18A	LTR/ERVL	1	357	(0)	2724313
12	23.4	4.6	4.4	chr3	156816720	156816784	(41478775)	+	G-rich	Low_complexity	1	68	(0)	2724605
18	16.6	1.6	7.8	chr3	156817017	156817079	(41478480)	+	(GCG)n	Simple_repeat	1	64	(0)	2724606
13	5.3	0.0	0.0	chr3	156826640	156826659	(41468900)	+	(CCT)n	Simple_repeat	1	20	(0)	2724616
18	26.9	2.3	4.5	chr3	157159577	157159663	(41135896)	+	(CCG)n	Simple_repeat	1	89	(0)	2725059
18	7.6	0.0	0.0	chr3	157159984	157160011	(41135548)	+	(CGT)n	Simple_repeat	1	28	(0)	2725060
15	0.0	0.0	0.0	chr3	157438021	157438037	(40857522)	+	(GC)n	Simple_repeat	1	17	(0)	2725504
41	0.0	0.0	0.0	chr3	157438038	157438072	(40857487)	+	(CA)n	Simple_repeat	1	35	(0)	2725505
2221	12.5	1.1	2.8	chr3	157448796	157449156	(40846403)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2725525
486	19.9	2.1	4.7	chr3	157449163	157449310	(40846249)	C	L1M5	LINE/L1	(2053)	4093	3950	2725526
34	27.5	1.6	2.4	chr3	158105768	158105890	(40189669)	+	(CCG)n	Simple_repeat	1	125	(0)	2726362
65	28.3	1.1	0.5	chr3	158106137	158106318	(40189241)	+	GA-rich	Low_complexity	1	184	(0)	2726363
2186	12.1	4.2	1.4	chr3	158491941	158492310	(39803249)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2726872
2353	9.5	0.6	0.0	chr3	158559305	158559630	(39735929)	+	THE1D-int	LTR/ERVL-MaLR	1	328	(1303)	2726954
1708	13.2	3.0	1.4	chr3	158559623	158559914	(39735645)	+	THE1D	LTR/ERVL-MaLR	85	381	(0)	2726954
15	17.9	0.0	0.0	chr3	160226116	160226147	(38069412)	+	(GGC)n	Simple_repeat	1	32	(0)	2729486
235	20.4	9.3	6.7	chr3	160449195	160449299	(37846260)	+	MIR	SINE/MIR	59	166	(96)	2729796
11830	9.2	0.3	0.0	chr3	160939794	160941368	(37354191)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2730589
2592	8.5	0.6	0.6	chr3	160941369	160941723	(37353836)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2730589
309	36.3	14.6	3.4	chr3	160941724	160941908	(37353651)	+	L2c	LINE/L2	3178	3385	(2)	2730588
11400	10.3	0.6	0.1	chr3	161776444	161778015	(36517544)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2731836
2274	13.7	1.1	0.8	chr3	161778016	161778369	(36517190)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2731836
1928	14.5	5.5	5.2	chr3	161779517	161779879	(36515680)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2731840
366	34.3	10.5	3.5	chr3	164109994	164110796	(34184763)	+	Charlie24	DNA/hAT-Charlie	232	1097	(1353)	2734539
2377	10.4	2.5	0.0	chr3	164110797	164111142	(34184417)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2734540
10982	11.6	0.5	0.2	chr3	164111143	164112718	(34182841)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2734540
2513	9.6	3.1	0.0	chr3	164801339	164801682	(33493877)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2735386
1858	18.1	3.0	2.8	chr3	165240520	165240882	(33054677)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2735947
4199	13.9	6.8	0.2	chr3	165432591	165433390	(32862169)	C	L1PBa	LINE/L1	(4450)	2413	1558	2736224
1689	15.7	7.4	1.4	chr3	165433395	165433750	(32861809)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	2736225
3188	19.9	1.7	0.5	chr3	168670980	168671616	(29623943)	+	LTR9D	LTR/ERV1	1	645	(0)	2740381
2703	7.3	0.3	0.0	chr3	169444301	169444643	(28850916)	+	THE1A	LTR/ERVL-MaLR	1	344	(11)	2741335
11396	9.3	2.3	0.0	chr3	169444646	169446188	(28849371)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2741335
625	29.9	16.7	2.2	chr3	169756280	169756645	(28538914)	C	L2c	LINE/L2	(2)	3385	2956	2741767
2538	7.0	0.3	0.3	chr3	169756648	169756989	(28538570)	C	THE1A	LTR/ERVL-MaLR	(0)	355	14	2741768
559	31.6	6.8	3.9	chr3	169756990	169757215	(28538344)	C	L2c	LINE/L2	(482)	2937	2704	2741767
12	13.9	0.0	0.0	chr3	169769521	169769544	(28526015)	+	(GCC)n	Simple_repeat	1	24	(0)	2741786
15	16.8	1.9	7.3	chr3	170356808	170356861	(27938698)	+	G-rich	Low_complexity	1	55	(0)	2742884
13	14.4	3.2	0.0	chr3	170357188	170357218	(27938341)	+	G-rich	Low_complexity	1	32	(0)	2742885
15	20.3	4.4	0.0	chr3	170357245	170357255	(27938304)	+	GA-rich	Low_complexity	1	46	(0)	2742886
12	18.4	0.0	3.0	chr3	170357256	170357288	(27938271)	+	G-rich	Low_complexity	1	33	(0)	2742887
18	16.9	4.2	2.0	chr3	170357487	170357534	(27938025)	+	(GGC)n	Simple_repeat	1	50	(0)	2742888
13	15.0	0.0	8.9	chr3	170357539	170357583	(27937976)	+	(CTCCC)n	Simple_repeat	1	45	(0)	2742889
12	15.8	0.0	3.3	chr3	170357586	170357615	(27937944)	+	(GGC)n	Simple_repeat	1	30	(0)	2742890
28	20.9	1.3	2.6	chr3	170357707	170357805	(27937754)	+	(GGC)n	Simple_repeat	1	97	(0)	2742891
26	17.6	0.0	3.3	chr3	172039625	172039685	(26255874)	+	(GCG)n	Simple_repeat	1	61	(0)	2745520
11326	9.3	0.2	0.7	chr3	172432368	172433954	(25861605)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2746063
2024	15.7	3.6	3.6	chr3	172619269	172619632	(25675927)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2746393
35	0.0	0.0	0.0	chr3	173584400	173584432	(24711127)	+	(T)n	Simple_repeat	1	33	(0)	2747755
15	4.8	0.0	0.0	chr3	173584469	173584490	(24711069)	+	(AAGA)n	Simple_repeat	1	22	(0)	2747756
13	12.6	0.0	9.5	chr3	173585477	173585518	(24710041)	+	(TCCCCT)n	Simple_repeat	1	42	(0)	2747757
781	32.3	1.3	4.6	chr3	174424637	174425026	(23870533)	+	L1MCb	LINE/L1	82	458	(5587)	2748960
10631	10.8	0.6	8.6	chr3	175923889	175925606	(22369953)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2751033
2652	8.8	0.6	0.3	chr3	175925607	175925960	(22369599)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2751033
4124	16.6	1.7	0.8	chr3	176036321	176036845	(22258714)	+	L1M3	LINE/L1	3578	4108	(2032)	2751160
2527	10.8	0.6	0.0	chr3	176036846	176037198	(22258361)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2751161
4124	16.6	1.7	0.8	chr3	176037199	176037442	(22258117)	+	L1M3	LINE/L1	4109	4354	(1786)	2751160
271	27.1	9.7	6.3	chr3	177334431	177334685	(20960874)	+	L2a	LINE/L2	3123	3426	(0)	2753080
2248	9.4	0.0	1.9	chr3	179653926	179654232	(18641327)	+	AluSx1	SINE/Alu	1	301	(11)	2756627
14	19.9	2.4	2.3	chr3	181712415	181712456	(16583103)	+	(GGC)n	Simple_repeat	1	43	(0)	2759751
3661	11.5	0.0	1.4	chr3	181993903	181994047	(16301512)	C	L1PB1	LINE/L1	(3)	6148	6005	2760387
2201	13.2	1.7	0.8	chr3	181994048	181994399	(16301160)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2760388
3661	11.5	0.0	1.4	chr3	181994400	181994818	(16300741)	C	L1PB1	LINE/L1	(147)	6004	5592	2760387
2390	11.5	0.0	0.0	chr3	183167161	183167472	(15128087)	C	AluSx1	SINE/Alu	(0)	312	1	2762226
1635	15.3	7.2	4.5	chr3	183167473	183167686	(15127873)	C	MLT1B	LTR/ERVL-MaLR	(124)	266	43	2762225
2541	8.9	1.4	2.5	chr3	183167687	183168045	(15127514)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2762227
10423	8.1	9.7	0.1	chr3	183168046	183169473	(15126086)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2762227
2178	16.1	4.6	1.5	chr3	184070799	184071181	(14224378)	+	L1MB2	LINE/L1	5750	6150	(21)	2763937
2828	7.1	0.8	0.0	chr3	184071182	184071533	(14224026)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2763938
2178	16.1	4.6	1.5	chr3	184071534	184071552	(14224007)	+	L1MB2	LINE/L1	6151	6164	(7)	2763937
18	10.0	0.0	2.9	chr3	184155440	184155473	(14140086)	+	(GCG)n	Simple_repeat	1	34	(0)	2764121
13	18.3	8.5	3.1	chr3	184155511	184155569	(14139990)	+	(CGC)n	Simple_repeat	1	64	(0)	2764122
17	21.6	5.3	3.8	chr3	184155542	184155616	(14139943)	+	(CGCCG)n	Simple_repeat	1	79	(0)	2764123
12	8.8	4.2	0.0	chr3	185152947	185152970	(13142589)	+	(GCG)n	Simple_repeat	1	25	(0)	2765862
22	22.5	6.0	0.0	chr3	185153040	185153106	(13142453)	+	(GC)n	Simple_repeat	1	71	(0)	2765863
2793	7.3	0.3	0.3	chr3	185311168	185311522	(12984037)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2766147
19	25.1	2.2	5.5	chr3	186567280	186567368	(11728191)	+	(CGC)n	Simple_repeat	1	91	(0)	2768577
2289	10.7	0.7	0.0	chr3	186995227	186995535	(11300024)	+	AluSc8	SINE/Alu	1	311	(0)	2769397
2148	12.2	0.0	0.0	chr3	186995570	186995856	(11299703)	+	AluSx	SINE/Alu	9	295	(17)	2769398
36	23.5	0.0	0.0	chr3	187745323	187745401	(10550158)	+	(AGC)n	Simple_repeat	1	79	(0)	2770635
2043	16.4	6.2	3.9	chr3	188517417	188517527	(9778032)	+	MSTB	LTR/ERVL-MaLR	2	126	(300)	2772039
2148	13.7	1.4	0.8	chr3	188517528	188517880	(9777679)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2772040
2043	16.4	6.2	3.9	chr3	188517881	188518181	(9777378)	+	MSTB	LTR/ERVL-MaLR	127	424	(2)	2772039
1019	29.4	5.2	3.4	chr3	189240792	189241602	(9053957)	C	L1ME4b	LINE/L1	(169)	1221	504	2773228
2489	11.1	0.6	0.0	chr3	189241603	189241955	(9053604)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2773230
359	30.9	6.1	4.6	chr3	189241956	189242159	(9053400)	C	L1ME4b	LINE/L1	(1001)	5643	5432	2773228
1912	14.6	4.8	3.0	chr3	189544373	189544740	(8750819)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2773738
513	33.0	1.6	0.0	chr3	190514250	190514431	(7781128)	C	MIR3	SINE/MIR	(1)	207	23	2775223
1765	29.1	5.5	2.8	chr3	190971553	190972349	(7323210)	C	ERV3-16A3_I-int	LTR/ERVL	(900)	4814	3789	2775905
688	30.6	10.0	1.3	chr3	190972394	190972704	(7322855)	+	MLT1F1-int	LTR/ERVL-MaLR	1148	1488	(1)	2775906
16	31.0	1.4	1.4	chr3	194134104	194134176	(4161383)	+	G-rich	Low_complexity	1	74	(0)	2780601
301	31.1	8.4	8.8	chr3	194486407	194486656	(3808903)	+	L1MDb	LINE/L1	511	759	(5650)	2781194
16	23.6	4.4	2.8	chr3	194486657	194486724	(3808835)	+	(CGCCGC)n	Simple_repeat	1	71	(0)	2781195
14	18.3	2.7	0.0	chr3	194486839	194486875	(3808684)	+	G-rich	Low_complexity	1	38	(0)	2781196
13	13.1	5.6	9.3	chr3	195270948	195271018	(3024541)	+	(GGCCAGC)n	Simple_repeat	1	75	(0)	2782627
13	18.4	5.3	0.0	chr4	825597	825634	(189388921)	+	GA-rich	Low_complexity	1	40	(0)	2789580
143	18.4	0.7	1.9	chr4	826205	826509	(189388046)	+	G-rich	Low_complexity	1	307	(0)	2789581
31	21.1	5.0	4.0	chr4	1684328	1684446	(188530109)	+	(CCG)n	Simple_repeat	1	125	(0)	2790462
13	28.0	0.0	0.0	chr4	1793348	1793390	(188421165)	+	(CGGA)n	Simple_repeat	1	43	(0)	2790608
16	15.2	4.2	4.0	chr4	1793384	1793431	(188421124)	+	G-rich	Low_complexity	1	50	(0)	2790609
17	15.1	6.8	0.0	chr4	1793641	1793684	(188420871)	+	G-rich	Low_complexity	1	47	(0)	2790610
26	21.5	2.2	5.4	chr4	1793670	1793760	(188420795)	+	(GCG)n	Simple_repeat	1	93	(0)	2790611
559	17.3	16.1	1.3	chr4	1870269	1870426	(188344129)	+	MER67A	LTR/ERV1	3	188	(355)	2790724
993	29.4	6.4	6.0	chr4	2380006	2380537	(187834018)	C	Charlie2a	DNA/hAT-Charlie	(443)	2418	1885	2791484
2531	9.7	1.7	0.3	chr4	2380576	2380925	(187833630)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2791486
10807	7.8	0.3	0.7	chr4	2380926	2381401	(187833154)	+	THE1A-int	LTR/ERVL-MaLR	1	475	(1105)	2791486
10807	7.8	0.3	0.7	chr4	2381706	2382747	(187831808)	+	THE1A-int	LTR/ERVL-MaLR	476	1514	(66)	2791486
2430	9.3	0.3	0.0	chr4	2382748	2383101	(187831454)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2791488
10498	11.7	6.6	0.3	chr4	3379882	3381408	(186833147)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	2793118
38802	6.0	0.3	1.0	chr4	3458732	3460384	(186754171)	+	HERVL-int	LTR/ERVL	3618	5263	(391)	2793185
1469	11.3	1.2	4.6	chr4	3460385	3460643	(186753912)	C	THE1B	LTR/ERVL-MaLR	(114)	250	1	2793188
1476	16.3	10.2	1.7	chr4	3636201	3636555	(186578000)	C	MER21B	LTR/ERVL	(553)	385	1	2793413
360	32.5	10.5	2.7	chr4	3636708	3636969	(186577586)	+	L2a	LINE/L2	3107	3391	(35)	2793414
740	24.8	1.4	1.4	chr4	3745661	3745873	(186468682)	C	L1MC	LINE/L1	(2368)	5514	5302	2793547
334	31.5	11.5	1.8	chr4	3745865	3746117	(186468438)	+	L1MC4	LINE/L1	5852	6048	(1834)	2793548
17	23.3	0.0	2.4	chr4	3765559	3765613	(186448942)	+	(CG)n	Simple_repeat	1	53	(0)	2793579
14	7.2	3.0	5.9	chr4	3765836	3765868	(186448687)	+	(GCCC)n	Simple_repeat	1	34	(0)	2793580
28	21.4	4.2	5.6	chr4	3765932	3766051	(186448504)	+	(GGC)n	Simple_repeat	1	125	(0)	2793581
2498	10.2	3.6	2.8	chr4	4265690	4266050	(185948505)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2794400
2745	7.1	0.3	0.0	chr4	4368083	4368436	(185846119)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2794606
2158	13.0	6.8	0.8	chr4	4886566	4886923	(185327632)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2795653
2651	11.8	4.9	0.5	chr4	5393395	5393803	(184820752)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2796498
15	24.3	2.9	4.3	chr4	5892949	5893016	(184321539)	+	(CGCC)n	Simple_repeat	1	70	(0)	2797372
30	19.9	0.0	6.5	chr4	5893053	5893144	(184321411)	+	G-rich	Low_complexity	1	92	(0)	2797373
1984	13.1	3.9	1.9	chr4	6133993	6134365	(184080190)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2797802
288	31.4	5.9	7.9	chr4	6134384	6134573	(184079982)	+	L2c	LINE/L2	3021	3206	(181)	2797803
14	27.0	4.3	2.7	chr4	8871369	8871438	(181343117)	+	(CCG)n	Simple_repeat	1	73	(0)	2802393
23	27.1	4.5	3.6	chr4	8871407	8871538	(181343017)	+	(GTCGCC)n	Simple_repeat	1	138	(0)	2802394
9771	12.7	7.6	0.1	chr4	11896963	11898471	(178316084)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	2806952
1825	15.2	4.7	6.4	chr4	11898472	11898859	(178315696)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2806952
2782	3.3	0.0	0.3	chr4	12844867	12845173	(177369382)	+	AluY	SINE/Alu	1	306	(5)	2808366
976	24.2	4.2	11.9	chr4	12845174	12845466	(177369089)	+	MLT1B	LTR/ERVL-MaLR	128	390	(0)	2808365
211	25.4	6.3	4.8	chr4	12845484	12845545	(177369010)	+	L2b	LINE/L2	3311	3373	(2)	2808367
44	27.4	1.6	0.0	chr4	13627443	13627570	(176586985)	+	(CGG)n	Simple_repeat	1	130	(0)	2809599
2272	12.2	1.1	1.1	chr4	13824206	13824560	(176389995)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2809918
11538	10.1	0.5	0.1	chr4	13824561	13826133	(176388422)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2809918
607	30.2	4.3	9.2	chr4	14732680	14733047	(175481508)	C	L2a	LINE/L2	(5)	3421	3073	2811470
2254	10.4	5.1	0.6	chr4	14733049	14733387	(175481168)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2811471
11510	10.6	0.4	0.2	chr4	14733388	14734963	(175479592)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2811471
22	19.5	0.0	0.0	chr4	15003113	15003159	(175211396)	+	(CCT)n	Simple_repeat	1	47	(0)	2811955
14	8.1	3.9	0.0	chr4	15003176	15003201	(175211354)	+	(AGC)n	Simple_repeat	1	27	(0)	2811956
24	24.6	2.7	1.3	chr4	15003724	15003798	(175210757)	+	(GGC)n	Simple_repeat	1	77	(0)	2811957
48	26.8	3.1	4.4	chr4	15003782	15004003	(175210552)	+	(CCG)n	Simple_repeat	1	229	(0)	2811958
19	7.3	0.0	0.0	chr4	15004115	15004143	(175210412)	+	(GCG)n	Simple_repeat	1	29	(0)	2811959
5018	17.9	1.7	1.6	chr4	15084488	15085237	(175129318)	C	L1MD1	LINE/L1	(0)	6242	5484	2812058
2030	9.7	13.0	0.0	chr4	15085238	15085546	(175129009)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2812059
11029	10.2	2.4	0.7	chr4	15085547	15087098	(175127457)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	2	2812059
2546	10.2	0.6	0.0	chr4	15087100	15087452	(175127103)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2812059
13	16.8	2.8	2.8	chr4	15681302	15681347	(174533208)	+	G-rich	Low_complexity	1	46	(0)	2813056
593	21.9	8.9	3.6	chr4	15699328	15699497	(174515058)	+	L1M7	LINE/L1	1538	1759	(748)	2813080
2610	6.8	0.0	8.5	chr4	15699499	15699886	(174514669)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2813084
237	26.1	1.5	0.0	chr4	15712814	15712878	(174501677)	+	MER117	DNA/hAT-Charlie	14	79	(118)	2813112
2201	8.4	7.8	0.0	chr4	15713199	15713483	(174501072)	C	AluSx4	SINE/Alu	(1)	309	1	2813113
11663	9.6	1.2	1.2	chr4	15954102	15954921	(174259634)	C	THE1A-int	LTR/ERVL-MaLR	(762)	818	1	2813535
2613	10.2	0.3	0.8	chr4	15954922	15955278	(174259277)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2813535
12	21.4	4.4	2.1	chr4	16226806	16226850	(173987705)	+	(CGG)n	Simple_repeat	1	47	(0)	2813970
347	28.0	14.2	1.5	chr4	16988810	16989012	(173225543)	+	MLT1H	LTR/ERVL-MaLR	57	289	(260)	2815348
14	11.3	3.5	0.0	chr4	18021444	18021472	(172193083)	+	(GCGCC)n	Simple_repeat	1	30	(0)	2817242
29	7.9	0.0	0.0	chr4	18021687	18021727	(172192828)	+	(GCG)n	Simple_repeat	1	41	(0)	2817243
13	23.9	0.0	2.4	chr4	18021876	18021916	(172192639)	+	(CTCCC)n	Simple_repeat	1	41	(0)	2817244
659	33.2	3.6	1.3	chr4	18246450	18246786	(171967769)	+	L1MC5a	LINE/L1	2088	2383	(394)	2817616
1988	15.3	3.3	3.3	chr4	18246787	18247150	(171967405)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2817618
321	33.7	4.9	5.2	chr4	18247151	18247175	(171967380)	+	L1MC5	LINE/L1	8966	8986	(318)	2817619
279	28.6	5.7	6.3	chr4	20247971	20248112	(169966443)	C	MIRb	SINE/MIR	(0)	268	128	2820688
13	4.5	0.0	7.4	chr4	20251725	20251751	(169962804)	+	(CGC)n	Simple_repeat	1	27	(0)	2820692
25	10.7	0.0	0.0	chr4	20251997	20252036	(169962519)	+	(GGC)n	Simple_repeat	1	40	(0)	2820693
16	23.0	7.0	3.3	chr4	22515667	22515752	(167698803)	+	(GCA)n	Simple_repeat	1	92	(0)	2824078
30	26.4	1.5	5.8	chr4	22516000	22516135	(167698420)	+	(CGC)n	Simple_repeat	1	138	(0)	2824079
2065	12.0	5.7	0.9	chr4	24741046	24741381	(165473174)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	2827666
1402	19.7	10.1	6.8	chr4	24741382	24741695	(165472860)	C	Charlie4a	DNA/hAT-Charlie	(206)	302	2	2827665
17	27.7	1.2	4.9	chr4	25030664	25030744	(165183811)	+	(CGCCC)n	Simple_repeat	1	82	(0)	2828147
15	14.2	10.6	0.0	chr4	26860767	26860813	(163353742)	+	(GCG)n	Simple_repeat	1	52	(0)	2831734
16	0.0	0.0	0.0	chr4	26860925	26860942	(163353613)	+	(T)n	Simple_repeat	1	18	(0)	2831735
26	23.2	0.0	4.8	chr4	26861040	26861122	(163353433)	+	(GGC)n	Simple_repeat	1	83	(0)	2831736
13	17.3	3.9	5.7	chr4	26861187	26861237	(163353318)	+	(GCTGC)n	Simple_repeat	1	53	(0)	2831737
2152	17.8	8.7	1.3	chr4	27367280	27367728	(162846827)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	21	2832505
1821	17.6	3.3	2.8	chr4	27367739	27368100	(162846455)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2832506
13	18.8	4.5	2.2	chr4	30719608	30719651	(159494904)	+	(CCTCCCT)n	Simple_repeat	1	46	(0)	2837090
36	30.6	1.8	3.5	chr4	30721980	30722149	(159492406)	+	(CGG)n	Simple_repeat	1	173	(0)	2837094
10389	11.4	3.3	0.0	chr4	31198967	31200494	(159014061)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2837747
2382	10.7	2.2	0.3	chr4	31200495	31200842	(159013713)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2837747
2619	8.3	1.1	0.0	chr4	34059422	34059772	(156154783)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2841610
2352	12.0	3.3	3.3	chr4	38550512	38550874	(151663681)	+	THE1B	LTR/ERVL-MaLR	1	363	(1)	2847976
1446	23.3	19.1	2.1	chr4	41826442	41826940	(148387615)	+	LTR50	LTR/ERVL	43	652	(143)	2854686
10592	12.0	3.2	0.4	chr4	41968086	41969668	(148244887)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	2854885
13	13.6	2.9	2.9	chr4	42151696	42151729	(148062826)	+	(CGCCGG)n	Simple_repeat	1	35	(0)	2855149
16	26.4	1.8	1.8	chr4	42152271	42152326	(148062229)	+	(GCC)n	Simple_repeat	1	57	(0)	2855150
15	9.7	0.0	0.0	chr4	42656757	42656778	(147557777)	+	(AC)n	Simple_repeat	1	22	(0)	2855919
12	19.1	5.9	3.7	chr4	42656945	42656995	(147557560)	+	(CCGCG)n	Simple_repeat	1	54	(0)	2855920
13181	20.8	3.4	2.2	chr4	42785196	42787898	(147426657)	C	L1PREC2	LINE/L1	(4636)	3519	835	2856087
6263	24.1	7.2	8.1	chr4	46613463	46614175	(143600380)	+	Charlie10	DNA/hAT-Charlie	2015	2702	(120)	2861075
2315	11.6	0.8	1.4	chr4	46614184	46614540	(143600015)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2861077
14445	14.3	3.0	0.6	chr4	46614557	46615994	(143598561)	+	Tigger1	DNA/TcMar-Tigger	1	1478	(940)	2861078
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
47	0.0	0.0	0.0	chr4	49321339	49321381	(140893174)	+	(TCTG)n	Simple_repeat	1	43	(0)	2865127
43	9.0	0.0	0.0	chr4	49321431	49321489	(140893066)	+	(CA)n	Simple_repeat	1	59	(0)	2865128
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
1130	13.8	0.3	0.1	chr4	49514156	49515857	(140698698)	+	ACRO1	Satellite/acro	1	1705	(0)	2865184
290	20.4	3.1	1.2	chr4	49577303	49577392	(140637163)	C	HSAT5	Satellite	(7)	91	1	2865282
285	26.1	0.0	1.8	chr4	49577533	49577634	(140636921)	C	HSAT5	Satellite	(1)	100	1	2865283
639	7.7	0.0	0.6	chr4	49577855	49577952	(140636603)	C	HSAT5	Satellite	(3)	97	1	2865284
2645	17.9	3.0	0.4	chr4	52548028	52548482	(137666073)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	2866323
430	26.6	5.9	7.2	chr4	52548483	52548601	(137665954)	C	MIR	SINE/MIR	(63)	199	83	2866322
2511	11.7	3.6	1.4	chr4	52548602	52548957	(137665598)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2866324
13	15.1	6.2	3.9	chr4	52659371	52659418	(137555137)	+	(GGCCGC)n	Simple_repeat	1	51	(0)	2866515
12	30.2	5.8	0.0	chr4	55396377	55396445	(134818110)	+	G-rich	Low_complexity	1	73	(0)	2870819
14	16.2	4.7	2.2	chr4	55546253	55546295	(134668260)	+	(CCGCC)n	Simple_repeat	1	45	(0)	2871090
20	20.6	2.0	0.0	chr4	56049161	56049210	(134165345)	+	(TGC)n	Simple_repeat	1	51	(0)	2871924
14	24.6	3.3	3.2	chr4	56049218	56049278	(134165277)	+	(GCCG)n	Simple_repeat	1	63	(0)	2871925
12	13.6	6.8	4.3	chr4	56049424	56049467	(134165088)	+	G-rich	Low_complexity	1	47	(0)	2871926
2073	10.2	8.3	2.3	chr4	56077082	56077431	(134137124)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	2871980
1289	32.9	9.6	3.5	chr4	56622788	56623500	(133591055)	C	MamGypLTR1d	LTR/Gypsy	(11)	802	42	2872954
2570	10.3	1.1	0.3	chr4	56623528	56623879	(133590676)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2872955
1983	12.4	0.0	0.4	chr4	56987619	56987892	(133226663)	+	AluSz	SINE/Alu	21	293	(19)	2873770
612	22.1	0.0	5.1	chr4	56987943	56988080	(133226475)	+	FLAM_C	SINE/Alu	2	132	(1)	2873771
23	28.9	0.0	4.3	chr4	61200502	61200593	(129013962)	+	(CGC)n	Simple_repeat	1	92	(0)	2879116
17	18.4	0.0	0.0	chr4	61200700	61200730	(129013825)	+	(GT)n	Simple_repeat	1	31	(0)	2879117
2618	10.4	0.0	0.0	chr4	62439055	62439409	(127775146)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2880787
2322	11.4	1.4	0.8	chr4	62525677	62526029	(127688526)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2880917
350	27.4	12.1	0.0	chr4	62526039	62526140	(127688415)	+	Charlie17a	DNA/hAT-Charlie	46	161	(56)	2880918
808	25.0	9.5	1.6	chr4	62526144	62526395	(127688160)	C	MLT1A1	LTR/ERVL-MaLR	(2)	406	133	2880919
22	10.0	0.0	0.0	chr4	63173346	63173377	(127041178)	+	(GT)n	Simple_repeat	1	32	(0)	2881711
2429	12.5	0.3	0.0	chr4	63173407	63173757	(127040798)	C	THE1A	LTR/ERVL-MaLR	(2)	353	2	2881712
44	7.1	1.7	0.0	chr4	63173758	63173816	(127040739)	+	(TA)n	Simple_repeat	1	60	(0)	2881713
2506	9.4	1.1	1.4	chr4	63244343	63244698	(126969857)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2881789
10635	12.6	0.5	0.0	chr4	63627309	63628880	(126585675)	+	THE1A-int	LTR/ERVL-MaLR	1	1579	(1)	2882214
1869	13.5	1.6	1.0	chr4	63628881	63629186	(126585369)	+	THE1A	LTR/ERVL-MaLR	1	308	(47)	2882214
440	13.6	0.0	0.0	chr4	63629202	63629267	(126585288)	C	THE1-int	LTR/ERVL-MaLR	(1006)	574	509	2882215
247	18.2	0.0	0.0	chr4	63629265	63629308	(126585247)	+	THE1A	LTR/ERVL-MaLR	312	355	(0)	2882214
3728	15.5	5.3	2.6	chr4	63629333	63629940	(126584615)	+	L1MA3	LINE/L1	6065	6695	(870)	2882212
2286	23.4	4.8	5.9	chr4	64090124	64090198	(126124357)	C	L1MB7	LINE/L1	(3528)	3116	3042	2882758
2248	12.8	1.1	0.3	chr4	64090199	64090550	(126124005)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2882761
4748	23.8	6.0	3.6	chr4	64090551	64091550	(126123005)	C	L1MB7	LINE/L1	(3603)	3041	1931	2882758
13	18.2	0.0	4.9	chr4	65670313	65670353	(124544202)	+	(GCTGAGG)n	Simple_repeat	1	41	(0)	2884662
5310	10.7	2.8	1.1	chr4	66574696	66575495	(123639060)	+	LTR25	LTR/ERV1	1	814	(30)	2885774
2013	24.7	4.3	3.6	chr4	67030616	67031232	(123183323)	C	MER92B	LTR/ERV1	(14)	622	1	2886367
439	29.8	10.1	0.0	chr4	67031276	67031426	(123183129)	+	MIR	SINE/MIR	12	179	(83)	2886368
1978	19.7	2.3	2.5	chr4	67031429	67031893	(123182662)	C	MER89	LTR/ERV1	(0)	559	1	2886369
393	25.8	4.1	1.1	chr4	67532922	67533015	(122681540)	+	MER68B	LTR/ERVL	468	564	(0)	2887079
2512	10.9	0.3	0.0	chr4	67533080	67533429	(122681126)	+	THE1A	LTR/ERVL-MaLR	5	355	(0)	2887081
307	26.6	15.3	5.3	chr4	67533497	67533683	(122680872)	+	HAL1	LINE/L1	37	245	(2262)	2887082
18	21.1	1.7	4.9	chr4	68349770	68349829	(121864726)	+	(CCG)n	Simple_repeat	1	61	(0)	2888211
17	11.6	0.0	0.0	chr4	70705259	70705287	(119509268)	+	(GCG)n	Simple_repeat	1	29	(0)	2891024
1987	9.2	1.8	1.5	chr4	70837634	70837906	(119376649)	C	AluSq2	SINE/Alu	(6)	307	34	2891286
13	14.5	5.1	0.0	chr4	70837934	70837949	(119376606)	+	(TTAAGGC)n	Simple_repeat	1	17	(0)	2891287
2582	3.5	0.0	0.0	chr4	70837950	70838238	(119376317)	+	AluYc	SINE/Alu	1	289	(10)	2891288
12	17.7	3.1	0.0	chr4	70902282	70902313	(119312242)	+	(CCTCC)n	Simple_repeat	1	33	(0)	2891446
12	20.4	5.6	3.5	chr4	70902418	70902471	(119312084)	+	(CTCCTGT)n	Simple_repeat	1	57	(0)	2891447
36	21.7	2.1	1.1	chr4	71187258	71187350	(119027205)	+	(CGG)n	Simple_repeat	1	95	(0)	2891896
2512	9.1	1.1	0.0	chr4	71408818	71409168	(118805387)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2892188
11348	9.4	1.0	0.0	chr4	71409169	71410681	(118803874)	+	THE1A-int	LTR/ERVL-MaLR	1	1528	(52)	2892188
14	23.2	3.9	1.9	chr4	72569185	72569236	(117645319)	+	(AGCG)n	Simple_repeat	1	54	(0)	2893668
22	17.0	0.0	6.6	chr4	72569253	72569313	(117645242)	+	GA-rich	Low_complexity	1	61	(0)	2893669
13	19.2	6.1	1.9	chr4	72569320	72569368	(117645187)	+	(GCTGCTG)n	Simple_repeat	1	52	(0)	2893670
16	18.9	0.0	0.0	chr4	73258286	73258321	(116956234)	+	(TCCTCG)n	Simple_repeat	1	36	(0)	2894652
23	39.8	0.0	0.0	chr4	73258320	73258377	(116956178)	+	(CGCTGC)n	Simple_repeat	1	101	(0)	2894653
28	25.2	0.0	0.0	chr4	73258339	73258406	(116956149)	+	(GCC)n	Simple_repeat	1	68	(0)	2894654
14	30.4	0.0	0.0	chr4	73258378	73258420	(116956135)	+	(GCT)n	Simple_repeat	1	43	(0)	2894655
29	32.6	0.8	1.6	chr4	73258540	73258660	(116955895)	+	(GCC)n	Simple_repeat	1	122	(0)	2894656
27	20.4	1.6	0.0	chr4	73258763	73258824	(116955731)	+	(GCC)n	Simple_repeat	1	63	(0)	2894657
23	25.4	1.4	1.4	chr4	73258825	73258834	(116955721)	+	(GCCACC)n	Simple_repeat	1	73	(0)	2894658
27	7.0	4.4	0.0	chr4	73258871	73258915	(116955640)	+	(GGGA)n	Simple_repeat	1	47	(0)	2894659
4565	16.4	2.9	0.6	chr4	73337789	73338622	(116875933)	C	L1MB8	LINE/L1	(19)	6159	5306	2894760
2341	10.8	0.8	1.7	chr4	73338623	73338980	(116875575)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2894761
6771	10.8	0.8	0.2	chr4	73338981	73340298	(116874257)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	61	2894761
251	26.5	5.7	2.4	chr4	74932832	74932916	(115281639)	+	L2c	LINE/L2	3291	3378	(9)	2896884
24	7.9	2.4	2.3	chr4	74933047	74933088	(115281467)	+	(GGC)n	Simple_repeat	1	43	(0)	2896885
537	34.9	2.5	5.9	chr4	75164027	75164279	(115050276)	+	MIR	SINE/MIR	2	245	(17)	2897160
1856	18.1	0.3	0.0	chr4	75164493	75164784	(115049771)	C	AluJb	SINE/Alu	(12)	300	8	2897161
2750	7.9	0.3	0.3	chr4	75509582	75509936	(114704619)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2897547
634	23.9	1.4	0.0	chr4	75675024	75675165	(114539390)	C	MIR	SINE/MIR	(100)	162	19	2897811
493	28.4	3.0	0.6	chr4	75675172	75675328	(114539227)	C	L1M5	LINE/L1	(433)	5809	5649	2897814
1032	16.9	6.3	0.0	chr4	75675329	75675505	(114539050)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	2897815
2446	6.1	0.3	0.3	chr4	75675511	75675805	(114538750)	+	AluSp	SINE/Alu	1	295	(18)	2897816
10520	10.0	1.3	2.3	chr4	76416450	76417475	(113797080)	+	THE1A-int	LTR/ERVL-MaLR	555	1580	(0)	2899204
717	7.3	0.0	0.0	chr4	76417476	76417571	(113796984)	+	THE1A	LTR/ERVL-MaLR	1	96	(259)	2899204
1141	6.0	2.6	0.0	chr4	76417570	76417720	(113796835)	+	THE1A	LTR/ERVL-MaLR	201	355	(0)	2899204
280	33.2	9.0	3.0	chr4	76417732	76417930	(113796625)	C	L2a	LINE/L2	(258)	3168	2957	2899203
332	27.6	17.8	2.4	chr4	76418007	76418214	(113796341)	C	L2a	LINE/L2	(469)	2950	2704	2899203
25	22.1	6.3	4.4	chr4	76949773	76949899	(113264656)	+	(AGCCGG)n	Simple_repeat	1	135	(0)	2900137
18	12.6	0.0	0.0	chr4	77075885	77075911	(113138644)	+	(A)n	Simple_repeat	1	27	(0)	2900313
21	17.5	3.6	1.8	chr4	77075912	77075937	(113138618)	+	A-rich	Low_complexity	3	57	(0)	2900314
2427	11.0	0.3	1.3	chr4	77116948	77117256	(113097299)	+	AluSq2	SINE/Alu	1	306	(7)	2900393
1391	28.9	4.6	2.6	chr4	77117257	77117287	(113097268)	C	LTR33	LTR/ERVL	(8)	507	480	2900394
2558	11.1	0.8	1.1	chr4	77117288	77117643	(113096912)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2900395
30	0.0	0.0	0.0	chr4	77819050	77819075	(112395480)	+	(AC)n	Simple_repeat	1	26	(0)	2901221
2314	10.1	0.0	0.3	chr4	78867777	78868089	(111346466)	+	AluSz6	SINE/Alu	1	312	(0)	2902881
2388	8.0	4.5	0.3	chr4	78868110	78868448	(111346107)	C	THE1A	LTR/ERVL-MaLR	(1)	354	1	2902882
16	16.6	0.0	0.0	chr4	78939644	78939670	(111274885)	+	(T)n	Simple_repeat	1	27	(0)	2902973
2210	11.4	0.7	0.0	chr4	79027990	79028288	(111186267)	+	AluSc8	SINE/Alu	11	311	(0)	2903096
187	27.0	7.5	8.3	chr4	79028527	79028647	(111185908)	C	OldhAT1	DNA/hAT-Ac	(2643)	205	86	2903097
14	30.7	0.0	0.0	chr4	80202042	80202089	(110012466)	+	(GGC)n	Simple_repeat	1	48	(0)	2904524
14	4.9	0.0	0.0	chr4	80202096	80202116	(110012439)	+	(CAG)n	Simple_repeat	1	21	(0)	2904525
21	26.1	2.5	2.4	chr4	80202283	80202393	(110012162)	+	(GCAGCG)n	Simple_repeat	1	111	(0)	2904526
12	15.8	0.0	3.3	chr4	80202412	80202441	(110012114)	+	(CGG)n	Simple_repeat	1	30	(0)	2904527
13	28.9	0.0	0.0	chr4	80202895	80202937	(110011618)	+	G-rich	Low_complexity	1	43	(0)	2904528
14	21.7	0.0	2.6	chr4	80266834	80266872	(109947683)	+	(TCC)n	Simple_repeat	1	39	(0)	2904622
12	4.5	4.0	3.9	chr4	80266956	80266980	(109947575)	+	(CAG)n	Simple_repeat	1	26	(0)	2904623
2348	24.0	13.2	5.0	chr4	80376921	80377786	(109836769)	C	L1ME1	LINE/L1	(784)	5395	4461	2904742
2488	9.9	0.0	0.0	chr4	80377798	80378129	(109836426)	C	THE1A	LTR/ERVL-MaLR	(23)	332	1	2904744
35	29.7	1.1	5.5	chr4	82373481	82373661	(107840894)	+	(CGC)n	Simple_repeat	1	183	(0)	2907493
15	9.1	0.0	0.0	chr4	83010797	83010820	(107203735)	+	(GCC)n	Simple_repeat	1	24	(0)	2908655
13	4.3	3.9	3.7	chr4	83010826	83010851	(107203704)	+	(CCT)n	Simple_repeat	1	27	(0)	2908656
2516	20.1	4.5	1.4	chr4	84656214	84656749	(105557806)	+	L1MB7	LINE/L1	5530	6081	(103)	2911426
2714	7.1	0.6	0.8	chr4	84656750	84657105	(105557450)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2911427
11741	8.5	0.6	1.0	chr4	84657106	84657410	(105557145)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1283	2911427
14	16.4	2.9	0.0	chr4	84965922	84965955	(105248600)	+	(CCGACC)n	Simple_repeat	1	35	(0)	2911909
18	26.4	0.0	7.9	chr4	84966648	84966680	(105247875)	+	(TCC)n	Simple_repeat	1	43	(46)	2911910
13	9.3	0.0	0.0	chr4	84966681	84966703	(105247852)	+	(CTGA)n	Simple_repeat	1	23	(0)	2911911
18	26.4	0.0	7.9	chr4	84966704	84966736	(105247819)	+	(TCC)n	Simple_repeat	44	89	(0)	2911910
19	13.0	2.2	4.3	chr4	84966775	84966782	(105247773)	+	(CCTT)n	Simple_repeat	1	46	(0)	2911912
13	12.6	5.4	2.6	chr4	84966783	84966819	(105247736)	+	(CCTTT)n	Simple_repeat	1	39	(0)	2911913
13	29.0	1.5	4.3	chr4	84966951	84967018	(105247537)	+	(CTCCT)n	Simple_repeat	1	69	(0)	2911914
1953	15.7	3.8	5.4	chr4	85315409	85315778	(104898777)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2912343
38	6.3	2.0	0.0	chr4	85813794	85813843	(104400712)	+	(TA)n	Simple_repeat	1	51	(0)	2913021
2761	12.6	6.7	1.8	chr4	85813844	85813857	(104400698)	C	L1MA9	LINE/L1	(142)	6170	6148	2913020
2031	15.4	3.6	3.3	chr4	85813858	85814220	(104400335)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2913022
13	12.2	3.7	0.0	chr4	86935280	86935306	(103279249)	+	(CCG)n	Simple_repeat	1	28	(0)	2914647
1921	17.6	0.3	0.7	chr4	87422068	87422369	(102792186)	+	AluJb	SINE/Alu	1	301	(11)	2915482
2722	33.5	2.5	3.8	chr4	91770628	91771216	(98443339)	C	MER83B-int	LTR/ERV1	(1051)	3903	3318	2921519
2176	14.1	0.9	0.3	chr4	91771217	91771564	(98442991)	C	THE1A	LTR/ERVL-MaLR	(2)	353	4	2921521
10802	11.4	1.5	0.5	chr4	91771568	91772583	(98441972)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	550	2921522
10802	11.4	1.5	0.5	chr4	91772887	91773432	(98441123)	C	THE1A-int	LTR/ERVL-MaLR	(1031)	549	2	2921522
2147	14.2	0.8	1.1	chr4	91773434	91773789	(98440766)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2921522
2722	33.5	2.5	3.8	chr4	91773790	91774801	(98439754)	C	MER83B-int	LTR/ERV1	(1637)	3317	2320	2921519
20	3.7	0.0	0.0	chr4	92305517	92305544	(97909011)	+	(CGCCT)n	Simple_repeat	1	28	(0)	2922096
14	11.0	0.0	5.9	chr4	92306021	92306054	(97908501)	+	(ACACAT)n	Simple_repeat	1	34	(0)	2922097
14489	16.5	2.8	3.8	chr4	92794907	92795165	(97419390)	C	Tigger2	DNA/TcMar-Tigger	(166)	2552	2308	2922744
2489	10.5	0.3	0.0	chr4	92795166	92795516	(97419039)	+	THE1A	LTR/ERVL-MaLR	1	352	(3)	2922746
14489	16.5	2.8	3.8	chr4	92795517	92797841	(97416714)	C	Tigger2	DNA/TcMar-Tigger	(411)	2307	2	2922744
2313	12.6	3.6	2.5	chr4	93976669	93977027	(96237528)	+	THE1B	LTR/ERVL-MaLR	2	364	(0)	2924328
253	19.1	0.0	0.0	chr4	94039083	94039124	(96175431)	+	MER5B	DNA/hAT-Charlie	137	178	(0)	2924417
2172	11.2	7.2	2.5	chr4	94039135	94039491	(96175064)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2924418
3138	17.0	4.8	0.5	chr4	94690830	94691433	(95523122)	+	Tigger2b_Pri	DNA/TcMar-Tigger	391	1021	(47)	2925387
23	0.0	0.0	0.0	chr4	94757884	94757908	(95456647)	+	(A)n	Simple_repeat	1	25	(0)	2925516
13	14.7	0.0	3.1	chr4	95242662	95242693	(94971862)	+	A-rich	Low_complexity	1	32	(0)	2926154
1129	11.6	4.0	4.5	chr4	96101325	96101523	(94113032)	C	THE1D	LTR/ERVL-MaLR	(0)	381	184	2927227
3563	12.9	7.4	1.4	chr4	96101537	96102108	(94112447)	+	THE1D-int	LTR/ERVL-MaLR	1023	1631	(0)	2927228
2148	25.4	5.9	5.5	chr4	97310259	97310365	(92904190)	C	L1MD1	LINE/L1	(9)	6548	6443	2928765
1948	14.0	6.0	2.7	chr4	97310366	97310733	(92903822)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2928766
2630	18.0	5.4	6.4	chr4	97310734	97311945	(92902610)	C	L1MD1	LINE/L1	(115)	6442	5235	2928765
11285	9.5	1.5	2.2	chr4	97356300	97357890	(92856665)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2928815
2016	14.0	1.7	2.5	chr4	97357891	97358248	(92856307)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2928815
828	30.6	10.1	0.5	chr4	98258153	98258539	(91956016)	C	L2a	LINE/L2	(15)	3411	2984	2929918
12	25.6	0.0	0.0	chr4	98658520	98658556	(91555999)	+	(CGTC)n	Simple_repeat	1	37	(0)	2930459
26	22.0	4.8	5.4	chr4	98658600	98658723	(91555832)	+	(CGCT)n	Simple_repeat	1	130	(0)	2930460
11531	9.0	1.6	0.1	chr4	98841327	98842881	(91371674)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2930770
2654	7.4	0.6	1.7	chr4	98842882	98843240	(91371315)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2930770
4001	23.6	10.2	3.1	chr4	98843241	98844398	(91370157)	C	L1M5	LINE/L1	(1143)	5003	3776	2930769
1736	16.3	5.5	2.1	chr4	99528568	99528899	(90685656)	C	THE1C	LTR/ERVL-MaLR	(31)	344	1	2931791
439	13.8	7.5	2.2	chr4	99528900	99528988	(90685567)	+	MER6B	DNA/TcMar-Tigger	117	210	(0)	2931792
687	22.5	3.6	0.0	chr4	100050720	100050879	(90163676)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	2932514
2118	14.6	1.7	0.3	chr4	100051023	100051372	(90163183)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2932515
11472	10.0	0.9	0.0	chr4	100051376	100052937	(90161618)	C	THE1A-int	LTR/ERVL-MaLR	(3)	1577	1	2932515
20	0.0	0.0	0.0	chr4	100738447	100738468	(89476087)	+	(A)n	Simple_repeat	1	22	(0)	2933440
254	34.7	4.0	1.2	chr4	100738521	100738692	(89475863)	C	MamRTE1	LINE/RTE-BovB	(216)	3596	3420	2933441
263	29.4	4.6	17.4	chr4	100738701	100738885	(89475670)	+	L2a	LINE/L2	2947	3097	(290)	2933442
15	15.9	2.9	0.0	chr4	101346648	101346682	(88867873)	+	(GGCGA)n	Simple_repeat	1	36	(0)	2934247
29	0.0	0.0	0.0	chr4	101346878	101346904	(88867651)	+	(CGC)n	Simple_repeat	1	27	(0)	2934248
21	15.3	3.1	6.0	chr4	101346965	101347029	(88867526)	+	(CCG)n	Simple_repeat	1	67	(0)	2934249
18	17.0	0.0	0.0	chr4	102501328	102501360	(87713195)	+	GA-rich	Low_complexity	1	33	(0)	2935760
17	25.3	2.4	4.8	chr4	102501456	102501537	(87713018)	+	(GCAGCC)n	Simple_repeat	1	84	(0)	2935761
13	20.7	2.1	4.1	chr4	102827165	102827212	(87387343)	+	(CGCGCC)n	Simple_repeat	1	49	(0)	2936199
194	20.4	5.3	0.0	chr4	102868710	102868763	(87345792)	C	MIRc	SINE/MIR	(14)	254	198	2936282
14	20.3	0.0	7.5	chr4	102868954	102869006	(87345549)	+	(GGCC)n	Simple_repeat	1	53	(0)	2936283
1491	28.4	2.5	5.3	chr4	102954872	102955074	(87259481)	+	L1M4a1	LINE/L1	19	219	(2360)	2936411
2432	7.4	4.8	0.6	chr4	102955075	102955414	(87259141)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2936412
1491	28.4	2.5	5.3	chr4	102955415	102955688	(87258867)	+	L1M4a1	LINE/L1	220	482	(2097)	2936411
2029	15.2	7.2	2.0	chr4	103231972	103232314	(86982241)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	2936779
11214	9.9	1.5	0.5	chr4	103232317	103233880	(86980675)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2936780
2015	15.0	6.9	2.0	chr4	103233881	103234226	(86980329)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2936780
5755	10.8	0.9	1.4	chr4	103234227	103234751	(86979804)	+	L1PREC2	LINE/L1	7638	8154	(1)	2936777
2706	8.7	0.3	0.0	chr4	103501427	103501771	(86712784)	+	THE1A	LTR/ERVL-MaLR	1	346	(9)	2937142
246	15.8	3.4	0.0	chr4	104404239	104404295	(85810260)	C	L1MC1	LINE/L1	(1640)	4924	4866	2938162
737	21.8	0.6	2.2	chr4	104404309	104404491	(85810064)	C	L1MC1	LINE/L1	(5347)	1404	1225	2938162
1481	10.7	0.5	0.0	chr4	104404494	104404709	(85809846)	+	L1PA12	LINE/L1	2374	2590	(4391)	2938164
28	3.3	0.0	0.0	chr4	104491308	104491338	(85723217)	+	(GCC)n	Simple_repeat	1	31	(0)	2938264
26	10.6	0.0	0.0	chr4	104491354	104491394	(85723161)	+	(GAG)n	Simple_repeat	1	41	(0)	2938265
50	15.2	0.0	0.0	chr4	104491401	104491487	(85723068)	+	(GCC)n	Simple_repeat	1	87	(0)	2938266
24	24.1	1.2	4.7	chr4	104491497	104491581	(85722974)	+	(GGC)n	Simple_repeat	1	86	(0)	2938267
17	35.1	0.8	4.2	chr4	104491582	104491612	(85722943)	+	(TGGCGG)n	Simple_repeat	2	118	(0)	2938268
11501	9.9	0.5	0.2	chr4	104840694	104842268	(85372287)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2938710
2247	11.8	2.2	3.1	chr4	104842269	104842626	(85371929)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2938710
469	31.3	7.9	5.4	chr4	104842627	104842886	(85371669)	+	L2a	LINE/L2	3154	3424	(2)	2938709
2507	9.6	0.6	0.6	chr4	106220111	106220465	(83994090)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2940511
2399	11.1	2.5	0.3	chr4	106339277	106339628	(83874927)	+	THE1B	LTR/ERVL-MaLR	1	360	(4)	2940684
2356	11.2	1.4	1.1	chr4	107610718	107611071	(82603484)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2942284
653	31.7	8.3	3.3	chr4	108649759	108650091	(81564464)	C	L2	LINE/L2	(704)	2715	2365	2943806
2577	6.8	1.1	7.9	chr4	110102842	110103222	(80111333)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2945963
580	26.3	2.9	5.7	chr4	110103223	110103321	(80111234)	+	L1MC5	LINE/L1	8065	8156	(1148)	2945962
2045	11.2	2.7	1.1	chr4	110335119	110335405	(79879150)	+	AluSx1	SINE/Alu	1	292	(20)	2946449
1949	15.5	4.1	2.0	chr4	110335419	110335774	(79878781)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2946450
198	34.9	0.0	0.0	chr4	111847838	111847900	(78366655)	+	L2c	LINE/L2	3283	3345	(42)	2948324
1926	16.1	1.3	2.3	chr4	112936782	112937091	(77277464)	C	AluJo	SINE/Alu	(5)	307	1	2950146
2329	9.7	0.0	0.3	chr4	112937329	112937627	(77276928)	C	AluSx1	SINE/Alu	(14)	298	1	2950147
351	20.6	12.1	12.8	chr4	113761739	113761855	(76452700)	+	L1MDb	LINE/L1	597	712	(5697)	2951248
3697	14.8	0.7	3.5	chr4	113872288	113872912	(76341643)	+	LTR35	LTR/ERV1	2	608	(0)	2951400
1265	20.1	13.7	1.1	chr4	113872932	113873261	(76341294)	+	HERV35I-int	LTR/ERV1	19	466	(6452)	2951400
2271	11.9	0.6	2.8	chr4	114294326	114294688	(75919867)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2951885
18131	13.5	2.2	2.1	chr4	114353102	114353915	(75860640)	C	L1MA3	LINE/L1	(2452)	5113	4291	2951953
2543	9.0	2.8	0.0	chr4	114353916	114354260	(75860295)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2951955
11174	9.8	1.5	0.0	chr4	114354261	114355817	(75858738)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2951955
2158	13.4	1.4	0.8	chr4	116097181	116097533	(74117022)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2954039
10956	11.5	0.6	0.1	chr4	116097534	116099104	(74115451)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2954039
302	33.2	7.4	7.1	chr4	118835728	118836038	(71378517)	+	L1M4b	LINE/L1	210	521	(6346)	2957575
19	20.8	0.0	0.0	chr4	118888870	118888913	(71325642)	+	(GGC)n	Simple_repeat	1	44	(0)	2957660
21	23.0	2.4	4.7	chr4	119627302	119627391	(70587164)	+	(CCGCG)n	Simple_repeat	1	87	(0)	2958740
12	23.3	0.0	0.0	chr4	120903311	120903345	(69311210)	+	(ACCAGG)n	Simple_repeat	1	35	(0)	2960363
2133	14.1	2.5	3.8	chr4	120903609	120903907	(69310648)	+	THE1B	LTR/ERVL-MaLR	1	296	(68)	2960364
2381	10.8	0.0	0.0	chr4	120903908	120904213	(69310342)	+	AluSz	SINE/Alu	1	306	(6)	2960365
18	4.5	0.0	0.0	chr4	123398930	123398952	(66815603)	+	(TG)n	Simple_repeat	1	23	(0)	2963910
18	13.6	3.7	5.4	chr4	124712247	124712300	(65502255)	+	(CTCCCG)n	Simple_repeat	1	56	(0)	2965643
23	24.2	1.6	0.0	chr4	124712431	124712493	(65502062)	+	(CCG)n	Simple_repeat	1	64	(0)	2965644
29	0.0	0.0	0.0	chr4	124712784	124712810	(65501745)	+	(CCCCGC)n	Simple_repeat	1	27	(0)	2965645
34	5.6	0.0	0.0	chr4	125315055	125315092	(64899463)	+	(TG)n	Simple_repeat	1	38	(0)	2966465
14	4.9	0.0	0.0	chr4	125315653	125315673	(64898882)	+	(GGC)n	Simple_repeat	1	21	(0)	2966466
6604	15.4	6.0	0.9	chr4	126522677	126523681	(63690874)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	166	2967910
2630	9.1	0.6	0.0	chr4	126523682	126524034	(63690521)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2967911
11461	9.7	0.5	0.5	chr4	126524035	126525614	(63688941)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2967911
2656	9.6	0.0	0.3	chr4	126525615	126525970	(63688585)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2967911
299	28.6	4.5	4.5	chr4	127622561	127622692	(62591863)	+	L2a	LINE/L2	3295	3426	(0)	2969317
5325	13.6	2.1	0.6	chr4	127757154	127757875	(62456680)	C	L1PA17	LINE/L1	(24)	6142	5405	2969497
2690	9.3	0.0	1.1	chr4	127757876	127758234	(62456321)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2969498
568	28.7	6.7	3.8	chr4	127853684	127854132	(62360423)	+	L1M5	LINE/L1	3465	3927	(2219)	2969642
924	26.7	9.4	1.6	chr4	127854162	127854466	(62360089)	+	L2	LINE/L2	2675	3005	(414)	2969643
2226	9.9	3.3	0.0	chr4	127854482	127854773	(62359782)	+	AluSc8	SINE/Alu	1	302	(9)	2969644
29	21.5	6.1	5.1	chr4	128061433	128061580	(62152975)	+	(CGGCG)n	Simple_repeat	1	157	(0)	2970077
24	26.3	0.0	1.4	chr4	128062002	128062071	(62152484)	+	(GCC)n	Simple_repeat	1	70	(0)	2970078
18	23.8	2.6	5.1	chr4	128287653	128287728	(61926827)	+	(CGC)n	Simple_repeat	1	78	(0)	2970493
18	9.6	0.0	5.4	chr4	128812298	128812334	(61402221)	+	GA-rich	Low_complexity	1	37	(0)	2971409
13	18.8	0.0	8.0	chr4	128812373	128812422	(61402133)	+	(CGGCGCG)n	Simple_repeat	1	50	(0)	2971410
21	11.0	2.6	0.0	chr4	129093794	129093832	(61120723)	+	(AAAC)n	Simple_repeat	1	40	(0)	2971744
2540	8.4	1.5	0.0	chr4	129678023	129678355	(60536200)	+	THE1A	LTR/ERVL-MaLR	1	338	(17)	2972455
2173	19.6	7.3	1.9	chr4	130563819	130564286	(59650269)	C	LTR42	LTR/ERVL	(0)	495	1	2973559
2511	9.2	2.2	0.3	chr4	131467778	131468125	(58746430)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2974646
10956	11.3	0.4	0.7	chr4	131468126	131469706	(58744849)	+	THE1A-int	LTR/ERVL-MaLR	1	1576	(4)	2974646
9855	7.4	0.0	2.1	chr4	131723886	131725481	(58489074)	+	SST1	Satellite/centr	1	1563	(0)	2974951
3369	32.4	8.0	6.4	chr4	133356145	133357071	(56857484)	+	L2a	LINE/L2	1253	2177	(1242)	2976872
2748	7.9	0.3	0.0	chr4	133357072	133357425	(56857130)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2976874
3369	31.2	9.8	5.8	chr4	133357426	133358587	(56855968)	+	L2a	LINE/L2	2178	3422	(4)	2976872
1618	14.7	10.5	8.3	chr4	134961182	134961553	(55253002)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2978718
9697	13.4	5.5	0.8	chr4	134961556	134963106	(55251449)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	2978718
10731	12.5	0.1	1.1	chr4	134987413	134989008	(55225547)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2978740
2297	12.1	2.0	1.4	chr4	135396140	135396492	(54818063)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2979240
2206	14.7	0.6	0.3	chr4	136833063	136833416	(53381139)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2980943
2642	8.0	1.1	0.3	chr4	137679241	137679592	(52534963)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2981964
484	19.5	2.4	7.5	chr4	137679643	137679775	(52534780)	+	MLT1E2	LTR/ERVL-MaLR	51	176	(451)	2981965
473	34.4	2.9	2.0	chr4	138246805	138247145	(51967410)	+	L1ME4b	LINE/L1	2533	2876	(3270)	2982639
749	17.1	16.2	0.0	chr4	138247149	138247288	(51967267)	+	AluSx	SINE/Alu	136	302	(10)	2982640
358	32.4	7.1	3.3	chr4	138247334	138248032	(51966523)	+	L1ME4b	LINE/L1	2915	3642	(2504)	2982639
6727	8.8	1.2	0.0	chr4	138332681	138333560	(51880995)	C	THE1B-int	LTR/ERVL-MaLR	(2)	1578	688	2982771
280	3.0	0.0	0.0	chr4	138333556	138333588	(51880967)	C	THE1B-int	LTR/ERVL-MaLR	(1547)	33	1	2982771
1644	12.9	16.8	2.3	chr4	138333589	138333898	(51880657)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2982771
32	22.3	0.0	1.2	chr4	139084411	139084490	(51130065)	+	(CGGCGG)n	Simple_repeat	1	80	(0)	2983898
18	7.5	0.0	0.0	chr4	139556235	139556262	(50658293)	+	(GGA)n	Simple_repeat	1	28	(0)	2984844
13	16.4	0.0	5.3	chr4	139556334	139556371	(50658184)	+	(CCCTCGC)n	Simple_repeat	1	38	(0)	2984845
12	13.7	6.2	0.0	chr4	140154048	140154079	(50060476)	+	(CGCTGC)n	Simple_repeat	1	34	(0)	2985803
16	0.0	0.0	0.0	chr4	140154108	140154127	(50060428)	+	(CGC)n	Simple_repeat	1	20	(0)	2985804
34	2.4	2.3	2.2	chr4	140154128	140154171	(50060384)	+	(CCT)n	Simple_repeat	1	45	(0)	2985805
18	15.0	2.1	4.1	chr4	140154307	140154354	(50060201)	+	(CGCCCGG)n	Simple_repeat	1	49	(0)	2985806
26	17.0	0.0	0.0	chr4	140154463	140154508	(50060047)	+	(TG)n	Simple_repeat	1	46	(0)	2985807
13	15.5	11.9	1.5	chr4	140427653	140427711	(49786844)	+	(GCGCGT)n	Simple_repeat	1	66	(0)	2986212
14	23.8	1.9	3.7	chr4	140755916	140755968	(49458587)	+	(CCG)n	Simple_repeat	1	54	(0)	2986711
13	9.3	0.0	0.0	chr4	140756134	140756156	(49458399)	+	(CGCC)n	Simple_repeat	1	23	(0)	2986712
15	17.0	0.0	6.7	chr4	140756162	140756206	(49458349)	+	(GCG)n	Simple_repeat	1	45	(0)	2986713
13	25.7	3.5	1.7	chr4	140756306	140756362	(49458193)	+	(GCCCCCG)n	Simple_repeat	1	59	(0)	2986714
30	12.4	1.9	0.0	chr4	140756367	140756419	(49458136)	+	(GGA)n	Simple_repeat	1	54	(0)	2986715
1972	23.9	5.5	9.5	chr4	141084753	141085021	(49129534)	+	MLT1G3	LTR/ERVL-MaLR	1	255	(340)	2987229
2590	10.2	0.6	0.3	chr4	141085022	141085384	(49129171)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2987230
1972	23.9	5.5	9.5	chr4	141085385	141085735	(49128820)	+	MLT1G3	LTR/ERVL-MaLR	256	595	(0)	2987229
36	7.2	0.0	0.0	chr4	141133452	141133495	(49081060)	+	(GT)n	Simple_repeat	1	44	(0)	2987301
16	7.2	3.2	3.1	chr4	144646231	144646261	(45568294)	+	(GCC)n	Simple_repeat	1	32	(0)	2991879
19	18.3	2.3	0.0	chr4	144646329	144646372	(45568183)	+	(TCC)n	Simple_repeat	1	45	(0)	2991880
14	24.8	3.0	4.3	chr4	145180703	145180769	(45033786)	+	(CGCCGC)n	Simple_repeat	1	69	(0)	2992523
12	21.0	2.5	2.4	chr4	145481658	145481697	(44732858)	+	G-rich	Low_complexity	1	41	(0)	2992972
13	5.0	0.0	4.3	chr4	145481722	145481744	(44732811)	+	(GCG)n	Simple_repeat	1	23	(0)	2992973
41	8.7	1.6	0.0	chr4	145938875	145938935	(44275620)	+	(CT)n	Simple_repeat	1	62	(0)	2993609
29	21.2	1.2	4.8	chr4	145938938	145939020	(44275535)	+	(CA)n	Simple_repeat	1	84	(0)	2993610
38	0.0	0.0	0.0	chr4	146639306	146639340	(43575215)	+	(GGC)n	Simple_repeat	1	35	(0)	2994601
17	19.2	0.0	0.0	chr4	146639348	146639383	(43575172)	+	(AGC)n	Simple_repeat	1	36	(0)	2994602
2023	12.7	4.7	2.7	chr4	146729597	146729969	(43484586)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2994729
2120	14.0	3.9	3.3	chr4	147379476	147379837	(42834718)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2995500
13	4.3	0.0	7.1	chr4	147732031	147732058	(42482497)	+	(GGGGC)n	Simple_repeat	1	28	(0)	2996130
10977	10.5	2.6	0.1	chr4	148636755	148638295	(41576260)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2997382
2723	9.9	0.0	0.0	chr4	148638296	148638650	(41575905)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2997382
11562	9.2	1.6	0.1	chr4	149360815	149362368	(40852187)	+	THE1A-int	LTR/ERVL-MaLR	2	1580	(0)	2998291
2619	8.5	0.6	0.3	chr4	149362369	149362722	(40851833)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2998291
2275	10.8	0.0	2.3	chr4	150993422	150993535	(39221020)	+	AluSx1	SINE/Alu	1	109	(203)	3000577
2407	10.5	0.8	0.8	chr4	150993536	150993890	(39220665)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3000578
2275	10.8	0.0	2.3	chr4	150993891	150994082	(39220473)	+	AluSx1	SINE/Alu	110	300	(12)	3000577
23	21.4	1.6	1.6	chr4	151409002	151409062	(38805493)	+	(GGC)n	Simple_repeat	1	62	(0)	3001452
36	7.2	3.5	0.0	chr4	151409092	151409149	(38805406)	+	(CCCCGC)n	Simple_repeat	1	60	(0)	3001453
13	17.4	4.9	2.3	chr4	151761141	151761181	(38453374)	+	GA-rich	Low_complexity	1	43	(0)	3001943
2151	15.6	0.8	0.8	chr4	152195132	152195486	(38019069)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3002602
1884	14.5	5.6	3.1	chr4	152195487	152195746	(38018809)	+	MLT2C2	LTR/ERVL	107	357	(40)	3002601
11229	8.6	3.2	0.5	chr4	152876112	152877648	(37336907)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3003696
2696	7.9	0.6	0.0	chr4	152877649	152878001	(37336554)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3003696
504	29.7	3.6	9.3	chr4	155685053	155685256	(34529299)	+	MIRb	SINE/MIR	29	220	(48)	3007785
825	28.4	1.4	0.0	chr4	155685268	155685475	(34529080)	C	MER58B	DNA/hAT-Charlie	(0)	341	131	3007786
23	7.2	0.0	0.0	chr4	155685604	155685633	(34528922)	+	(T)n	Simple_repeat	1	30	(0)	3007787
2730	6.6	0.8	0.0	chr4	155933089	155933438	(34281117)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	3008116
11173	9.3	2.7	0.3	chr4	155933439	155934980	(34279575)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3008116
9737	10.2	0.7	0.0	chr4	156926529	156927868	(33286687)	C	THE1A-int	LTR/ERVL-MaLR	(230)	1350	1	3009434
2367	11.9	0.8	0.8	chr4	156927869	156928223	(33286332)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3009434
3265	18.3	2.3	3.3	chr4	156933265	156933631	(33280924)	+	Tigger17a	DNA/TcMar-Tigger	1	363	(291)	3009442
1918	12.3	6.0	6.3	chr4	156933632	156934013	(33280542)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3009443
334	36.6	1.2	3.0	chr4	157003753	157003918	(33210637)	+	MLT1I	LTR/ERVL-MaLR	40	202	(209)	3009543
43	0.0	0.0	0.0	chr4	157004056	157004092	(33210463)	+	(GT)n	Simple_repeat	1	37	(0)	3009544
13	13.7	4.3	6.2	chr4	158768828	158768873	(31445682)	+	(CCGC)n	Simple_repeat	1	48	(0)	3011882
24	18.2	0.9	2.6	chr4	158768897	158768961	(31445594)	+	(GCC)n	Simple_repeat	1	63	(0)	3011883
23	26.8	3.9	2.8	chr4	158769107	158769209	(31445346)	+	(GCC)n	Simple_repeat	1	107	(0)	3011884
43	0.0	0.0	0.0	chr4	158964152	158964191	(31250364)	+	(CAAAA)n	Simple_repeat	1	40	(0)	3012164
2877	20.0	2.6	4.7	chr4	158964192	158964526	(31250029)	+	MLT1E3	LTR/ERVL-MaLR	299	624	(0)	3012162
209	26.6	4.2	13.1	chr4	158964527	158964557	(31249998)	C	MIR	SINE/MIR	(115)	147	118	3012160
1909	16.8	4.8	0.8	chr4	158964667	158965026	(31249529)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3012165
13	28.0	0.0	0.0	chr4	159103096	159103138	(31111417)	+	(GCAGGA)n	Simple_repeat	1	43	(0)	3012414
30	18.8	2.7	1.3	chr4	159103388	159103461	(31111094)	+	(GGC)n	Simple_repeat	1	76	(0)	3012415
2267	11.3	2.0	1.1	chr4	159322637	159322986	(30891569)	C	THE1A	LTR/ERVL-MaLR	(0)	355	3	3012716
2725	8.4	0.0	0.0	chr4	161912305	161912659	(28301896)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3015984
6264	11.6	0.2	0.2	chr4	161912660	161913558	(28300997)	+	THE1A-int	LTR/ERVL-MaLR	1	899	(681)	3015984
13	22.9	1.8	5.3	chr4	165379567	165379622	(24834933)	+	GA-rich	Low_complexity	1	57	(0)	3021000
13	24.2	2.3	0.0	chr4	165379654	165379697	(24834858)	+	(AAGGTGG)n	Simple_repeat	1	45	(0)	3021001
2418	13.5	6.8	2.4	chr4	165808434	165808481	(24406074)	C	MSTA	LTR/ERVL-MaLR	(0)	428	386	3021619
2739	7.6	0.3	0.0	chr4	165808482	165808835	(24405720)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3021620
2418	13.5	6.8	2.4	chr4	165808836	165809195	(24405360)	C	MSTA	LTR/ERVL-MaLR	(43)	385	1	3021619
9911	15.6	1.1	1.5	chr4	166414306	166414779	(23799776)	C	L1M1	LINE/L1	(2059)	5506	5032	3022370
2325	11.3	0.6	2.2	chr4	166414780	166415140	(23799415)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3022371
10792	11.0	1.5	0.1	chr4	166415141	166416697	(23797858)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3022371
5660	15.9	4.1	0.4	chr4	168046538	168047476	(22167079)	C	LTR1D	LTR/ERV1	(0)	975	1	3024305
927	23.1	10.3	9.5	chr4	168047477	168047495	(22167060)	C	L1MB7	LINE/L1	(245)	5939	5915	3024304
2816	6.5	0.3	0.3	chr4	168047496	168047850	(22166705)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3024306
11467	9.3	1.4	0.9	chr4	168047851	168048123	(22166432)	+	THE1A-int	LTR/ERVL-MaLR	1	274	(1306)	3024306
12	5.5	0.0	0.0	chr4	169271019	169271037	(20943518)	+	(CGC)n	Simple_repeat	1	19	(0)	3026073
15	8.1	0.0	3.6	chr4	169271052	169271079	(20943476)	+	(AGG)n	Simple_repeat	1	28	(0)	3026074
2139	14.8	0.8	0.6	chr4	178652330	178652683	(11561872)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3038477
10600	12.0	0.6	1.2	chr4	178652684	178654273	(11560282)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3038477
2568	9.3	0.6	0.0	chr4	179057289	179057641	(11156914)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3039013
934	36.6	10.4	3.5	chr4	179057642	179058282	(11156273)	+	L2a	LINE/L2	2746	3424	(2)	3039012
12	20.2	2.9	0.0	chr4	180058629	180058662	(10155893)	+	(CCTCA)n	Simple_repeat	1	35	(0)	3040276
23	19.2	0.0	6.0	chr4	180058811	180058877	(10155678)	+	GA-rich	Low_complexity	1	67	(0)	3040277
13	13.7	2.9	2.9	chr4	182144167	182144200	(8070355)	+	(CTCCT)n	Simple_repeat	1	35	(0)	3043028
29	0.0	0.0	0.0	chr4	182144203	182144227	(8070328)	+	(CA)n	Simple_repeat	1	25	(0)	3043029
14	16.3	4.7	2.2	chr4	182144437	182144479	(8070076)	+	(GGAGGCG)n	Simple_repeat	1	45	(0)	3043030
23	21.4	2.7	2.6	chr4	182144582	182144655	(8069900)	+	(CGCCCC)n	Simple_repeat	1	76	(0)	3043031
24	19.1	3.6	7.8	chr4	182144670	182144780	(8069775)	+	(GGCGC)n	Simple_repeat	1	115	(0)	3043032
19	8.5	0.0	8.9	chr4	182449092	182449136	(7765419)	+	(GCG)n	Simple_repeat	1	45	(0)	3043420
28	10.0	0.0	0.0	chr4	182449187	182449230	(7765325)	+	(GCG)n	Simple_repeat	1	44	(0)	3043420
192	17.0	25.4	0.0	chr4	183011405	183011457	(7203098)	+	L2b	LINE/L2	3295	3365	(10)	3044232
320	26.8	0.6	0.3	chr4	183011509	183011607	(7202948)	C	MLT1J1	LTR/ERVL-MaLR	(28)	416	298	3044233
23	23.3	1.7	0.0	chr4	183099190	183099258	(7115297)	+	GA-rich	Low_complexity	1	70	(0)	3044388
21	9.7	4.3	2.1	chr4	183099352	183099397	(7115158)	+	(CCGCGCC)n	Simple_repeat	1	48	(0)	3044389
294	31.8	2.6	6.8	chr4	183401737	183401898	(6812657)	C	L2c	LINE/L2	(7)	3380	3226	3044882
422	28.8	10.2	2.8	chr4	183402145	183402326	(6812229)	C	MIRb	SINE/MIR	(60)	208	12	3044883
11629	10.0	0.9	0.1	chr4	183466286	183467853	(6746702)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3045001
2898	5.4	1.1	0.0	chr4	183467854	183468204	(6746351)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3045001
15	13.3	7.3	0.0	chr4	183504266	183504306	(6710249)	+	(CGCACGC)n	Simple_repeat	1	44	(0)	3045071
14	3.6	6.7	3.1	chr4	183504426	183504455	(6710100)	+	(CGGAG)n	Simple_repeat	1	32	(0)	3045072
2333	10.7	4.2	1.4	chr4	184380248	184380617	(5833938)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3046467
1485	23.7	8.4	4.3	chr4	184579480	184579761	(5634794)	+	L1M5	LINE/L1	5191	5496	(747)	3046832
2654	9.1	0.8	0.0	chr4	184579762	184580113	(5634442)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3046834
2845	6.0	1.4	0.0	chr4	184779131	184779480	(5435075)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3047149
2060	12.2	5.8	1.6	chr4	185169204	185169568	(5044987)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3047810
411	34.3	2.9	3.8	chr4	186204522	186204730	(4009825)	+	MIRb	SINE/MIR	35	241	(27)	3049346
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
240	13.5	0.0	0.0	chr5	1571119	1571155	(179967104)	C	MER1B	DNA/hAT-Charlie	(210)	129	93	3056370
709	20.3	2.5	0.0	chr5	1571245	1571402	(179966857)	C	MER1B	DNA/hAT-Charlie	(360)	169	1	3056371
13	13.6	6.8	4.3	chr5	6633477	6633520	(174904739)	+	(GCC)n	Simple_repeat	1	47	(0)	3062115
2265	16.0	1.3	1.8	chr5	7815810	7816197	(173722062)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	3	3063609
375	30.1	7.5	3.7	chr5	7816202	7816522	(173721737)	C	LTR33	LTR/ERVL	(162)	353	20	3063610
1794	9.6	0.4	11.1	chr5	7854287	7854421	(173683838)	C	MLT2A2	LTR/ERVL	(0)	453	352	3063661
2185	9.4	7.0	0.9	chr5	7854422	7854754	(173683505)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3063662
1794	9.6	0.4	11.1	chr5	7854755	7854933	(173683326)	C	MLT2A2	LTR/ERVL	(102)	351	173	3063661
3739	16.6	4.8	1.0	chr5	8516896	8517576	(173020683)	C	L1P3	LINE/L1	(5733)	728	21	3064428
1527	12.0	7.8	1.1	chr5	8517600	8517885	(173020374)	C	THE1D	LTR/ERVL-MaLR	(74)	307	1	3064429
266	34.3	8.3	2.3	chr5	8517890	8518104	(173020155)	C	L1ME2z	LINE/L1	(508)	5616	5388	3064426
318	30.3	15.7	3.9	chr5	10601354	10601665	(170936594)	+	L2c	LINE/L2	3032	3387	(0)	3067213
2329	11.7	1.4	0.3	chr5	13781446	13781796	(167756463)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3071284
1809	14.4	8.3	3.5	chr5	13975071	13975415	(167562844)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	3071547
19	7.3	0.0	0.0	chr5	14011855	14011883	(167526376)	+	(GCGCG)n	Simple_repeat	1	29	(0)	3071610
2476	9.9	0.8	0.6	chr5	14565375	14565728	(166972531)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3072346
11610	10.5	0.5	0.1	chr5	14565729	14567301	(166970958)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3072346
2471	10.8	0.8	0.8	chr5	14567302	14567656	(166970603)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3072346
1063	10.9	0.0	0.0	chr5	14567658	14567795	(166970464)	C	AluSx	SINE/Alu	(174)	138	1	3072345
329	13.5	1.9	0.0	chr5	14665953	14666004	(166872255)	C	MSTB	LTR/ERVL-MaLR	(373)	53	1	3072509
2094	10.5	7.9	1.1	chr5	15582961	15583315	(165954944)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3073762
1435	18.2	8.3	0.0	chr5	16872251	16872536	(164665723)	+	L1MB2	LINE/L1	5853	6164	(7)	3075690
2706	6.7	3.1	0.3	chr5	16872622	16872966	(164665293)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3075691
11518	9.3	1.0	1.8	chr5	16872967	16874052	(164664207)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	493	3075691
1991	11.7	7.1	1.9	chr5	17209124	17209482	(164328777)	C	THE1D	LTR/ERVL-MaLR	(2)	379	1	3076455
30	18.2	0.0	0.0	chr5	17217607	17217664	(164320595)	+	(GGC)n	Simple_repeat	1	58	(0)	3076467
16	20.9	2.9	5.7	chr5	17217831	17217898	(164320361)	+	(GCCCC)n	Simple_repeat	1	70	(0)	3076468
2083	12.8	2.8	3.1	chr5	18846658	18847013	(162691246)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3078593
10769	11.3	1.4	0.1	chr5	18847014	18848572	(162689687)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3078593
2186	12.4	1.7	0.9	chr5	20739829	20740178	(160798081)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	3081047
16	4.5	0.0	0.0	chr5	20740195	20740217	(160798042)	+	(AAC)n	Simple_repeat	1	23	(0)	3081048
1692	16.3	7.4	0.0	chr5	21479959	21480258	(160058001)	+	MER2	DNA/TcMar-Tigger	22	345	(0)	3082060
320	22.9	12.5	4.5	chr5	21480265	21480374	(160057885)	C	L2a	LINE/L2	(97)	3329	3210	3082061
1642	13.5	8.4	4.9	chr5	21992812	21993178	(159545081)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3082809
14236	18.2	4.0	2.4	chr5	22042913	22044258	(159494001)	+	L1MA6	LINE/L1	4875	6226	(1336)	3082880
1889	15.4	4.7	1.1	chr5	22044259	22044625	(159493634)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3082882
14236	17.2	6.3	2.1	chr5	22044626	22046033	(159492226)	+	L1MA6	LINE/L1	6227	7719	(0)	3082880
1803	16.7	4.4	4.4	chr5	23477761	23478124	(158060135)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3084812
2620	9.9	0.3	0.0	chr5	23924617	23924970	(157613289)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3085411
9982	10.9	6.8	0.0	chr5	23924971	23926442	(157611817)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3085411
2047	14.1	5.3	2.5	chr5	24629528	24629891	(156908368)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3086328
11793	17.6	3.2	3.9	chr5	27746744	27748590	(153789669)	+	L1PA17	LINE/L1	3541	5357	(1492)	3090287
2275	15.7	0.0	2.9	chr5	27748591	27748965	(153789294)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3090289
1094	11.8	4.9	0.0	chr5	30253540	30253734	(151284525)	C	Tigger2a	DNA/TcMar-Tigger	(56)	378	179	3093433
2394	13.2	0.8	0.0	chr5	30253735	30254082	(151284177)	C	THE1B	LTR/ERVL-MaLR	(0)	364	14	3093434
511	13.3	1.1	0.0	chr5	30254082	30254171	(151284088)	C	THE1B-int	LTR/ERVL-MaLR	(29)	1551	1461	3093434
773	18.4	0.0	0.0	chr5	30254164	30254299	(151283960)	C	THE1B-int	LTR/ERVL-MaLR	(595)	985	850	3093434
11548	9.6	0.8	0.0	chr5	31073611	31075178	(150463081)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3094411
2044	14.6	1.7	1.1	chr5	31075179	31075531	(150462728)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3094411
697	19.6	6.4	4.1	chr5	31638707	31638903	(149899356)	+	MamRep488	DNA/hAT-Tip100	15	216	(3)	3095274
12	19.3	8.5	0.0	chr5	31639189	31639235	(149899024)	+	G-rich	Low_complexity	1	51	(0)	3095275
16	23.4	5.5	0.0	chr5	32173873	32173927	(149364332)	+	(GTC)n	Simple_repeat	1	58	(0)	3096322
14	12.1	0.0	3.5	chr5	32173926	32173954	(149364305)	+	(CGC)n	Simple_repeat	1	29	(0)	3096323
12	5.5	0.0	0.0	chr5	32174289	32174307	(149363952)	+	(GGC)n	Simple_repeat	1	19	(0)	3096324
12	34.2	0.0	1.7	chr5	32312855	32312914	(149225345)	+	(GCG)n	Simple_repeat	1	60	(0)	3096591
2380	11.9	0.8	0.8	chr5	34766785	34767139	(146771120)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3100378
617	21.8	2.4	0.8	chr5	34923581	34923704	(146614555)	C	FLAM_A	SINE/Alu	(15)	127	2	3100646
376	24.6	6.3	8.9	chr5	35605767	35606322	(145931937)	C	L1MEf	LINE/L1	(3633)	2686	2153	3101623
1314	18.6	0.4	3.4	chr5	35606325	35606558	(145931701)	+	THE1B	LTR/ERVL-MaLR	1	227	(137)	3101628
1655	29.9	7.4	5.0	chr5	35606559	35607647	(145930612)	C	L1MEf	LINE/L1	(4533)	1882	765	3101623
19	4.0	0.0	0.0	chr5	36877200	36877225	(144661034)	+	(CGG)n	Simple_repeat	1	26	(0)	3103488
15	22.6	4.8	0.0	chr5	38556751	38556792	(142981467)	+	(CG)n	Simple_repeat	1	44	(0)	3106292
305	35.2	9.3	3.4	chr5	40881309	40881491	(140656768)	+	L1MC	LINE/L1	5605	5806	(2076)	3109616
2419	8.5	7.0	0.0	chr5	40881494	40881823	(140656436)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3109618
11696	9.8	0.9	0.1	chr5	40881824	40883389	(140654870)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3109618
2200	12.9	1.4	0.8	chr5	41915477	41915829	(139622430)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3111000
12	19.8	3.9	5.6	chr5	42423657	42423708	(139114551)	+	(CCCT)n	Simple_repeat	1	54	(0)	3111600
36	27.6	2.4	0.8	chr5	42423774	42423896	(139114363)	+	(GCG)n	Simple_repeat	1	126	(0)	3111601
2314	9.6	2.5	3.6	chr5	51842669	51843026	(129695233)	C	THE1A	LTR/ERVL-MaLR	(0)	355	2	3118239
1891	7.1	0.0	0.0	chr5	51843028	51843267	(129694992)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1341	3118239
2712	8.4	0.0	1.1	chr5	52082150	52082508	(129455751)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3118543
11223	9.8	1.4	1.0	chr5	52082510	52084082	(129454177)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3118543
2714	7.4	0.8	0.0	chr5	52084083	52084434	(129453825)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3118543
1880	13.1	8.1	1.1	chr5	52331293	52331646	(129206613)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3118845
247	33.1	10.1	2.9	chr5	54106770	54106943	(127431316)	C	L2c	LINE/L2	(57)	3330	3143	3121220
2546	10.8	1.1	0.0	chr5	54106969	54107319	(127430940)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3121221
17	18.6	5.3	6.2	chr5	54517730	54517805	(127020454)	+	(CGG)n	Simple_repeat	1	80	(0)	3121856
13	26.3	0.0	5.5	chr5	54518246	54518300	(127019959)	+	(GCC)n	Simple_repeat	1	55	(0)	3121857
1977	15.3	3.3	2.5	chr5	54999166	54999526	(126538733)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3122572
449	29.0	11.1	0.0	chr5	56281232	56281455	(125256804)	C	MIRb	SINE/MIR	(14)	254	3	3124787
2740	9.3	0.0	0.0	chr5	56281558	56281912	(125256347)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3124788
622	27.0	8.8	5.9	chr5	56610558	56610864	(124927395)	+	LTR78	LTR/ERV1	839	1155	(149)	3125298
2980	8.3	0.0	1.4	chr5	56611041	56611093	(124927166)	+	L1MA2	LINE/L1	4448	4500	(1646)	3125299
2646	9.9	0.6	0.0	chr5	56611094	56611446	(124926813)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3125300
20	15.1	4.7	4.5	chr5	56815266	56815329	(124722930)	+	(CGCCTC)n	Simple_repeat	1	67	(0)	3125609
27	21.4	1.7	8.2	chr5	56815642	56815761	(124722498)	+	(GGC)n	Simple_repeat	1	122	(0)	3125610
2050	13.7	2.9	2.9	chr5	58285718	58286092	(123252167)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3127911
238	38.5	3.3	2.6	chr5	59566301	59566452	(121971807)	+	L2b	LINE/L2	3013	3165	(222)	3129670
187	33.2	14.9	2.5	chr5	59792639	59793071	(121745188)	C	L2	LINE/L2	(528)	2891	2396	3129985
715	28.3	10.9	0.3	chr5	59793248	59793559	(121744700)	+	LTR82A	LTR/ERVL	517	865	(7)	3129986
21	25.1	1.6	0.0	chr5	59893687	59893747	(121644512)	+	(CTG)n	Simple_repeat	1	62	(0)	3130139
15	14.4	3.1	0.0	chr5	59893925	59893956	(121644303)	+	(TCCT)n	Simple_repeat	1	33	(0)	3130140
11	24.9	0.0	0.0	chr5	59893997	59894030	(121644229)	+	(GCAGCA)n	Simple_repeat	1	34	(0)	3130141
290	28.3	0.9	0.9	chr5	59951841	59951954	(121586305)	C	LTR103b_Mam	LTR/ERV1?	(153)	395	282	3130231
1954	16.2	2.7	2.1	chr5	59951955	59952327	(121585932)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3130232
420	33.0	5.1	2.6	chr5	61587253	61587651	(119950608)	C	MLT1J	LTR/ERVL-MaLR	(129)	481	7	3132483
2607	8.5	0.3	2.5	chr5	61835602	61835964	(119702295)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3132858
12	18.0	8.8	4.0	chr5	62306381	62306448	(119231811)	+	(CTCCGCC)n	Simple_repeat	1	74	(0)	3133536
1691	13.4	5.8	11.1	chr5	63725554	63725957	(117812302)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3135549
304	26.0	1.1	4.0	chr5	63725980	63726104	(117812155)	C	MIR	SINE/MIR	(45)	163	41	3135550
1866	16.1	0.0	1.7	chr5	64973953	64974250	(116564009)	+	AluJo	SINE/Alu	1	293	(19)	3137178
2623	9.3	0.3	0.3	chr5	64974277	64974631	(116563628)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3137179
6593	12.0	2.0	0.5	chr5	65601606	65602601	(115935658)	C	THE1A-int	LTR/ERVL-MaLR	(569)	1011	1	3138092
2808	6.8	0.6	0.0	chr5	65602602	65602954	(115935305)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3138092
14	24.5	0.0	5.2	chr5	65925454	65925511	(115612748)	+	G-rich	Low_complexity	1	58	(0)	3138686
18	20.4	5.6	2.7	chr5	65925578	65925648	(115612611)	+	(CTGCCCC)n	Simple_repeat	1	75	(0)	3138687
20	20.9	5.3	2.5	chr5	65925814	65925888	(115612371)	+	(CCCT)n	Simple_repeat	1	79	(0)	3138688
15	0.0	0.0	0.0	chr5	66596841	66596859	(114941400)	+	(GCC)n	Simple_repeat	1	19	(0)	3139672
12	13.9	0.0	0.0	chr5	66596999	66597022	(114941237)	+	(AGG)n	Simple_repeat	1	24	(0)	3139673
15	12.4	2.6	5.0	chr5	71455695	71455733	(110082526)	+	(GCG)n	Simple_repeat	1	40	(0)	3147474
7959	13.6	1.7	0.4	chr5	71849666	71850917	(109687342)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	363	3148155
14	14.4	5.0	2.4	chr5	72956052	72956091	(108582168)	+	(GCGGCGC)n	Simple_repeat	1	42	(0)	3149768
575	22.8	15.2	0.0	chr5	73307474	73307640	(108230619)	+	L1ME3A	LINE/L1	5968	6164	(9)	3150295
26	6.2	0.0	0.0	chr5	73447454	73447487	(108090772)	+	(GGC)n	Simple_repeat	1	34	(0)	3150485
918	27.0	8.6	5.4	chr5	73610663	73610918	(107927341)	+	L2a	LINE/L2	3020	3278	(148)	3150796
2462	10.5	0.8	0.3	chr5	73610919	73611271	(107926988)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3150797
13	17.6	2.4	4.7	chr5	73626535	73626576	(107911683)	+	(GGC)n	Simple_repeat	1	43	(0)	3150827
321	25.4	0.0	9.2	chr5	73766727	73766878	(107771381)	+	L1M5	LINE/L1	5522	5659	(583)	3151044
2216	15.1	3.0	0.8	chr5	73766885	73767238	(107771021)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	3151045
11588	9.2	1.9	0.1	chr5	73767241	73768792	(107769467)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3151045
2403	13.0	3.0	0.6	chr5	73768793	73769147	(107769112)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3151045
25	10.1	2.3	0.0	chr5	74640843	74640885	(106897374)	+	(AGG)n	Simple_repeat	1	44	(0)	3152271
18	6.5	2.9	2.9	chr5	76083282	76083315	(105454944)	+	(AGG)n	Simple_repeat	1	35	(0)	3154463
1093	26.4	12.1	4.0	chr5	77216074	77216258	(104322001)	C	LTR33	LTR/ERVL	(3)	512	323	3156386
2283	12.0	3.6	1.7	chr5	77216259	77216615	(104321644)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3156387
27	19.2	4.4	5.9	chr5	77630146	77630258	(103908001)	+	G-rich	Low_complexity	1	118	(0)	3156916
15	9.1	0.0	0.0	chr5	77630660	77630683	(103907576)	+	(GGC)n	Simple_repeat	1	24	(0)	3156917
27	16.0	1.7	1.7	chr5	77852620	77852705	(103685554)	+	GA-rich	Low_complexity	1	86	(0)	3157272
36	0.0	0.0	0.0	chr5	77852876	77852906	(103685353)	+	(CA)n	Simple_repeat	1	31	(0)	3157273
15	19.9	5.4	3.4	chr5	78648612	78648667	(102889592)	+	GA-rich	Low_complexity	1	59	(0)	3158377
13	18.6	4.3	4.1	chr5	78648763	78648809	(102889450)	+	GA-rich	Low_complexity	1	49	(0)	3158378
16	28.6	0.0	1.8	chr5	78648818	78648874	(102889385)	+	(CCCGGC)n	Simple_repeat	1	57	(0)	3158379
20	19.9	5.7	4.3	chr5	78648874	78648961	(102889298)	+	G-rich	Low_complexity	1	93	(0)	3158380
20	15.9	5.1	6.0	chr5	79514225	79514303	(102023956)	+	(GCCGCGG)n	Simple_repeat	1	83	(0)	3159873
2435	8.3	0.3	9.1	chr5	80660068	80660193	(100878066)	C	THE1A	LTR/ERVL-MaLR	(5)	350	237	3161993
402	8.3	0.0	0.0	chr5	80660194	80660253	(100878006)	C	L1PA8	LINE/L1	(1)	6171	6112	3161994
2435	8.3	0.3	9.1	chr5	80660254	80660510	(100877749)	C	THE1A	LTR/ERVL-MaLR	(119)	236	1	3161993
549	20.7	0.8	11.9	chr5	80999866	80999999	(100538260)	C	MLT1G	LTR/ERVL-MaLR	(42)	549	418	3162550
282	25.5	1.9	11.7	chr5	81201075	81201194	(100337065)	+	MER5B	DNA/hAT-Charlie	1	108	(70)	3162832
2292	12.5	3.3	3.3	chr5	81388709	81389072	(100149187)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3163077
330	31.9	14.6	5.7	chr5	81389073	81389300	(100148959)	C	L2a	LINE/L2	(156)	3270	2960	3163076
27	6.0	0.0	0.0	chr5	81750239	81750273	(99787986)	+	(GCCCCA)n	Simple_repeat	1	35	(0)	3163564
11626	9.1	0.4	0.1	chr5	83505135	83506709	(98031550)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3166052
2682	8.5	0.3	0.3	chr5	83506710	83507064	(98031195)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3166052
241	34.1	3.8	2.8	chr5	83761955	83762135	(97776124)	+	MER5A	DNA/hAT-Charlie	1	183	(6)	3166369
4024	15.6	3.4	1.7	chr5	87835743	87836126	(93702133)	C	L1MA4A	LINE/L1	(0)	7722	7319	3171577
2487	13.0	0.3	0.3	chr5	87836127	87836489	(93701770)	C	THE1B	LTR/ERVL-MaLR	(1)	363	1	3171578
11845	6.8	0.9	0.1	chr5	88189236	88190729	(93347530)	C	HERVE-int	LTR/ERV1	(1991)	5822	4318	3171991
2320	12.2	0.8	0.8	chr5	89591901	89592255	(91946004)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3173767
1170	11.7	0.0	1.1	chr5	89592270	89592450	(91945809)	C	L1PA13	LINE/L1	(2)	6161	5983	3173769
11	27.4	1.6	4.8	chr5	90474401	90474462	(91063797)	+	GA-rich	Low_complexity	1	63	(0)	3174832
22	2.8	2.4	7.0	chr5	91380210	91380251	(90158008)	+	(CCG)n	Simple_repeat	1	43	(0)	3176168
1941	15.5	3.7	2.8	chr5	91703470	91703821	(89834438)	C	THE1B	LTR/ERVL-MaLR	(1)	363	9	3176609
301	33.1	7.1	6.5	chr5	91703848	91704154	(89834105)	C	MLT1O	LTR/ERVL-MaLR	(150)	392	84	3176610
514	37.2	0.8	3.9	chr5	92961897	92961961	(88576298)	C	MIRb	SINE/MIR	(9)	259	198	3178082
1894	16.1	4.1	3.1	chr5	92961962	92962321	(88575938)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3178083
13	17.1	6.0	3.8	chr5	93584371	93584420	(87953839)	+	(GCCCGGC)n	Simple_repeat	1	53	(0)	3178836
15	27.4	0.0	0.0	chr5	93584490	93584553	(87953706)	+	(CGCGCCC)n	Simple_repeat	1	64	(0)	3178837
3210	28.3	11.5	6.3	chr5	94032583	94032867	(87505392)	+	MSTB2-int	LTR/ERVL-MaLR	1203	1472	(263)	3179359
2030	15.3	4.1	2.5	chr5	94032874	94033236	(87505023)	+	THE1C	LTR/ERVL-MaLR	7	375	(0)	3179361
17	21.0	0.0	5.5	chr5	95284055	95284109	(86254150)	+	GA-rich	Low_complexity	1	55	(0)	3180923
42	15.6	2.3	1.1	chr5	95284570	95284656	(86253603)	+	(CTC)n	Simple_repeat	1	89	(0)	3180924
22	9.5	0.0	0.0	chr5	95284666	95284699	(86253560)	+	(GCG)n	Simple_repeat	1	34	(0)	3180925
230	22.9	1.4	5.4	chr5	95555504	95555577	(85982682)	C	Charlie9	DNA/hAT-Charlie	(7)	2750	2680	3181311
16	19.2	2.0	3.9	chr5	95731312	95731372	(85806887)	+	(GCAGCG)n	Simple_repeat	1	59	(0)	3181581
461	29.7	4.5	0.0	chr5	96651972	96652119	(84886140)	C	MIRb	SINE/MIR	(88)	180	26	3182894
87	0.0	0.0	0.0	chr5	96808188	96808261	(84729998)	+	(GT)n	Simple_repeat	1	74	(0)	3183133
18	12.0	0.0	0.0	chr5	96808270	96808296	(84729963)	+	(T)n	Simple_repeat	1	27	(0)	3183134
2010	14.7	3.7	3.3	chr5	97463054	97463408	(84074851)	+	THE1B	LTR/ERVL-MaLR	18	364	(0)	3183985
511	20.9	0.0	0.0	chr5	97463411	97463496	(84074763)	C	MER20	DNA/hAT-Charlie	(132)	87	2	3183986
2348	11.9	0.8	0.8	chr5	98560184	98560538	(82977721)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3185294
2231	15.8	0.8	0.6	chr5	98590173	98590535	(82947724)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3185331
14	21.5	7.6	1.4	chr5	98773829	98773866	(82764393)	+	(CGCTGCG)n	Simple_repeat	1	80	(25)	3185540
14	17.2	3.9	5.7	chr5	98773867	98773917	(82764342)	+	(GCT)n	Simple_repeat	1	53	(0)	3185541
14	21.5	7.6	1.4	chr5	98773918	98773927	(82764332)	+	(CGCTGCG)n	Simple_repeat	81	105	(0)	3185540
17	30.2	1.2	2.5	chr5	98773973	98774052	(82764207)	+	(GCCCGC)n	Simple_repeat	1	81	(0)	3185542
21	28.1	2.4	1.2	chr5	98774097	98774179	(82764080)	+	(CGCTGC)n	Simple_repeat	1	85	(0)	3185543
17	9.3	0.0	7.5	chr5	98928662	98928701	(82609558)	+	G-rich	Low_complexity	1	40	(0)	3185758
2173	12.8	0.8	1.1	chr5	101257545	101257900	(80280359)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3188697
1581	8.8	4.0	0.0	chr5	102092105	102092319	(79445940)	C	THE1A	LTR/ERVL-MaLR	(0)	355	132	3189701
6567	10.0	2.5	0.2	chr5	102092324	102093244	(79445015)	C	THE1A-int	LTR/ERVL-MaLR	(637)	943	1	3189701
2654	8.3	1.7	0.0	chr5	102093245	102093593	(79444666)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3189701
13	20.8	7.8	3.6	chr5	102296361	102296437	(79241822)	+	(AGCCTCC)n	Simple_repeat	1	83	(0)	3189947
28	14.7	3.2	1.6	chr5	103258663	103258724	(78279535)	+	GA-rich	Low_complexity	1	64	(0)	3191197
15	33.0	0.0	1.8	chr5	103259272	103259326	(78278933)	+	(GC)n	Simple_repeat	1	55	(0)	3191198
13	27.9	0.0	0.0	chr5	103259393	103259435	(78278824)	+	(GCTC)n	Simple_repeat	1	43	(0)	3191199
2381	9.3	3.1	0.0	chr5	104784959	104785301	(76752958)	+	THE1A	LTR/ERVL-MaLR	1	354	(1)	3193084
10818	11.7	1.1	0.1	chr5	104785303	104786865	(76751394)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3193084
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
12	27.7	3.1	3.0	chr5	107671093	107671156	(73867103)	+	(CCGGC)n	Simple_repeat	1	66	(0)	3196631
32	7.3	0.0	0.0	chr5	108381006	108381048	(73157211)	+	(CCG)n	Simple_repeat	1	43	(0)	3197552
15	16.9	0.0	0.0	chr5	108381811	108381837	(73156422)	+	(CA)n	Simple_repeat	1	27	(0)	3197553
12	9.8	0.0	0.0	chr5	108381945	108381966	(73156293)	+	(GCGA)n	Simple_repeat	1	22	(0)	3197554
20	30.0	3.5	0.0	chr5	109689790	109689874	(71848385)	+	(GCG)n	Simple_repeat	1	88	(0)	3199330
20	25.9	5.6	1.1	chr5	111224137	111224183	(70314076)	+	G-rich	Low_complexity	1	91	(0)	3201161
13	15.8	2.6	5.0	chr5	111224184	111224222	(70314037)	+	GA-rich	Low_complexity	1	40	(0)	3201162
24	15.1	0.0	5.3	chr5	111224406	111224462	(70313797)	+	(GGC)n	Simple_repeat	1	57	(0)	3201163
2398	11.9	0.3	2.5	chr5	111654281	111654643	(69883616)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3201713
18	27.9	0.0	2.9	chr5	111757614	111757681	(69780578)	+	(CGCACCC)n	Simple_repeat	1	68	(0)	3201827
15	24.9	0.0	0.0	chr5	111758220	111758253	(69780006)	+	(CA)n	Simple_repeat	1	34	(0)	3201828
614	22.2	0.0	3.8	chr5	112888727	112888823	(68649436)	+	FLAM_C	SINE/Alu	2	80	(53)	3203453
2359	13.0	0.8	4.0	chr5	112888824	112889199	(68649060)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3203454
614	21.5	0.0	4.4	chr5	112889200	112889250	(68649009)	+	FLAM_C	SINE/Alu	81	131	(2)	3203453
255	28.6	3.9	2.8	chr5	112889290	112889465	(68648794)	+	L1M5	LINE/L1	2217	2394	(3752)	3203455
12	13.9	0.0	0.0	chr5	115180302	115180325	(66357934)	+	(GGC)n	Simple_repeat	1	24	(0)	3206402
15	4.7	0.0	0.0	chr5	115180625	115180646	(66357613)	+	(AAAT)n	Simple_repeat	1	22	(0)	3206403
862	25.3	2.7	10.5	chr5	115295584	115295906	(66242353)	C	L2a	LINE/L2	(10)	3416	3120	3206585
389	28.0	8.6	4.0	chr5	115296014	115296236	(66242023)	C	MIRb	SINE/MIR	(0)	268	35	3206586
12	35.2	0.0	0.0	chr5	115296445	115296501	(66241758)	+	(CGCCCC)n	Simple_repeat	1	57	(0)	3206587
1806	19.0	5.0	0.3	chr5	117280000	117280363	(64257896)	+	MLT1B	LTR/ERVL-MaLR	5	386	(4)	3209422
1898	13.0	6.8	3.0	chr5	117280464	117280829	(64257430)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3209423
627	31.6	12.1	5.6	chr5	117280833	117281543	(64256716)	C	L1MC4a	LINE/L1	(1252)	4962	4200	3209418
11573	9.6	0.6	0.2	chr5	118482949	118484523	(63053736)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3210896
2637	7.7	0.6	3.0	chr5	118484524	118484887	(63053372)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3210896
14	24.7	0.0	2.2	chr5	120464396	120464440	(61073819)	+	(GCGGCA)n	Simple_repeat	1	45	(0)	3213552
12	20.7	0.0	2.9	chr5	120465303	120465337	(61072922)	+	(CCTT)n	Simple_repeat	1	35	(0)	3213553
14	19.9	0.0	4.5	chr5	120465571	120465614	(61072645)	+	(GGCGG)n	Simple_repeat	1	44	(0)	3213554
2218	12.5	1.1	2.2	chr5	120589497	120589855	(60948404)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3213710
2443	8.9	1.7	0.6	chr5	121164603	121164953	(60373306)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3214377
10830	10.6	2.3	0.3	chr5	121282119	121283667	(60254592)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3214512
2157	13.1	0.8	0.8	chr5	121283668	121284022	(60254237)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3214512
2324	11.7	1.1	1.1	chr5	121750886	121751240	(59787019)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3215083
2250	11.0	0.3	0.3	chr5	122453759	122454058	(59084201)	C	AluSz6	SINE/Alu	(12)	300	1	3215916
15	24.4	0.0	0.0	chr5	123090463	123090501	(58447758)	+	(GCG)n	Simple_repeat	1	39	(0)	3216925
500	26.3	1.2	1.8	chr5	126111823	126111992	(55426267)	C	L1ME2z	LINE/L1	(323)	6121	5953	3220793
2377	9.4	0.8	7.2	chr5	126112000	126112376	(55425883)	+	THE1A	LTR/ERVL-MaLR	2	354	(1)	3220794
11203	11.0	0.4	0.2	chr5	126112378	126113954	(55424305)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3220794
2002	13.5	4.2	1.9	chr5	126279919	126280287	(55257972)	C	THE1D	LTR/ERVL-MaLR	(2)	379	2	3220977
750	24.9	0.6	7.0	chr5	126280288	126280363	(55257896)	C	MER45A	DNA/hAT-Tip100	(102)	76	2	3220976
17	12.5	0.0	0.0	chr5	126777237	126777262	(54760997)	+	(GT)n	Simple_repeat	1	26	(0)	3221959
662	29.1	5.7	3.3	chr5	128706516	128706757	(52831502)	C	MER102c	DNA/hAT-Charlie	(12)	319	72	3224466
336	21.1	1.4	0.0	chr5	128706772	128706842	(52831417)	C	L1MC4a	LINE/L1	(20)	7975	7904	3224467
1528	23.3	7.3	4.7	chr5	128706843	128707270	(52830989)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	21	3224468
1661	15.4	9.9	2.0	chr5	128707271	128707615	(52830644)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3224469
1995	8.2	4.0	21.4	chr5	129407680	129408113	(52130146)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3225286
23	17.1	0.0	0.0	chr5	129461452	129461497	(52076762)	+	(CCGCCC)n	Simple_repeat	1	46	(0)	3225348
20	19.5	3.3	1.6	chr5	129904392	129904451	(51633808)	+	GA-rich	Low_complexity	1	62	(0)	3225895
30	20.4	2.4	2.4	chr5	129904499	129904580	(51633679)	+	(GCC)n	Simple_repeat	1	84	(0)	3225896
31	0.0	0.0	0.0	chr5	132228034	132228062	(49310197)	+	(GGAGCC)n	Simple_repeat	1	29	(0)	3229059
17	24.2	1.6	3.2	chr5	132369671	132369732	(49168527)	+	(CCCGC)n	Simple_repeat	1	63	(0)	3229279
1209	24.7	9.7	4.1	chr5	132645030	132645344	(48892915)	+	L2a	LINE/L2	839	1174	(2245)	3229698
548	22.1	3.7	0.0	chr5	132645414	132645544	(48892715)	+	L2a	LINE/L2	2181	2316	(1103)	3229698
893	29.8	12.3	1.9	chr5	132645545	132645865	(48892394)	C	LTR16C	LTR/ERVL	(0)	489	131	3229701
428	30.7	9.4	3.9	chr5	133617387	133617748	(47920511)	+	LTR16D	LTR/ERVL	210	564	(4)	3231178
1763	26.2	6.4	4.0	chr5	133889551	133890162	(47648097)	+	L2a	LINE/L2	2775	3416	(10)	3231542
2147	11.5	1.4	0.0	chr5	134420822	134421107	(47117152)	+	AluSc	SINE/Alu	1	290	(19)	3232529
1499	15.9	3.0	7.3	chr5	134421108	134421122	(47117137)	C	AluJr	SINE/Alu	(185)	127	119	3232528
2948	5.1	1.1	0.0	chr5	134421123	134421473	(47116786)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3232530
14	18.8	6.0	1.9	chr5	134845910	134845959	(46692300)	+	(CGCGTG)n	Simple_repeat	1	53	(0)	3233498
12	30.2	2.8	2.7	chr5	134905078	134905149	(46633110)	+	(GGCCGGC)n	Simple_repeat	1	74	(0)	3233621
1956	12.8	6.0	9.4	chr5	135252315	135252709	(46285550)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3234080
2327	21.5	2.2	1.0	chr5	135495178	135495572	(46042687)	C	MLT1F	LTR/ERVL-MaLR	(44)	504	108	3234372
2677	9.2	2.0	0.0	chr5	135495573	135495920	(46042339)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3234373
447	31.4	7.0	0.7	chr5	135536367	135536547	(46001712)	+	MIRb	SINE/MIR	14	215	(53)	3234435
2401	10.6	3.7	1.6	chr5	137569756	137570128	(43968131)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3237146
18	20.1	0.0	0.0	chr5	137753219	137753258	(43785001)	+	(CCG)n	Simple_repeat	1	40	(0)	3237461
26	32.3	0.0	0.0	chr5	137753348	137753433	(43784826)	+	(CCG)n	Simple_repeat	1	86	(0)	3237462
313	31.6	10.0	2.7	chr5	137889006	137889194	(43649065)	+	MIRb	SINE/MIR	2	211	(57)	3237696
1899	13.3	12.0	2.9	chr5	138027708	138028047	(43510212)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3237952
19	24.5	1.3	5.0	chr5	138033058	138033158	(43505101)	+	(GGCGG)n	Simple_repeat	1	97	(0)	3237963
576	28.6	5.3	2.5	chr5	138438584	138438784	(43099475)	+	MIRb	SINE/MIR	38	244	(24)	3238878
472	25.2	2.0	0.0	chr5	139182358	139182456	(42355803)	+	L2b	LINE/L2	3272	3372	(3)	3240231
15	0.0	5.3	0.0	chr5	139294474	139294492	(42243767)	+	(CG)n	Simple_repeat	1	20	(0)	3240506
15	15.5	3.4	8.2	chr5	139648213	139648271	(41889988)	+	GA-rich	Low_complexity	1	61	(0)	3241240
23	24.5	1.2	4.7	chr5	139648335	139648418	(41889841)	+	(GGC)n	Simple_repeat	1	85	(0)	3241241
12	9.1	7.7	4.8	chr5	139648420	139648458	(41889801)	+	(AGAGC)n	Simple_repeat	1	42	(0)	3241242
14	8.2	0.0	3.6	chr5	139648486	139648513	(41889746)	+	(CCCAG)n	Simple_repeat	1	28	(0)	3241243
14	9.6	0.0	0.0	chr5	139648803	139648825	(41889434)	+	(GCG)n	Simple_repeat	1	23	(0)	3241244
13	33.9	1.5	0.0	chr5	139648864	139648892	(41889367)	+	(CCCTCC)n	Simple_repeat	1	66	(0)	3241245
13	12.1	8.3	0.0	chr5	139648893	139648928	(41889331)	+	(CCCCT)n	Simple_repeat	1	39	(0)	3241246
24	17.4	7.6	1.2	chr5	140042801	140042879	(41495380)	+	(GCGGCT)n	Simple_repeat	1	85	(0)	3241897
64	5.7	2.1	2.1	chr5	140042904	140042998	(41495261)	+	(TGC)n	Simple_repeat	1	97	(0)	3241898
17	13.7	0.0	0.0	chr5	140043211	140043266	(41494993)	+	(GCAGC)n	Simple_repeat	1	56	(0)	3241899
14	27.4	0.0	1.9	chr5	140113737	140113752	(41424507)	+	(CAGCAG)n	Simple_repeat	1	15	(0)	3242043
29	0.0	0.0	0.0	chr5	140113753	140113779	(41424480)	+	(GGT)n	Simple_repeat	1	27	(0)	3242044
14	27.4	0.0	1.9	chr5	140113780	140113815	(41424444)	+	(CAGCAG)n	Simple_repeat	4	39	(0)	3242045
25	26.6	2.1	2.1	chr5	140113868	140113960	(41424299)	+	G-rich	Low_complexity	1	95	(0)	3242046
61	27.6	3.0	3.6	chr5	140114062	140114330	(41423929)	+	(GGC)n	Simple_repeat	1	277	(0)	3242047
561	30.5	4.4	10.4	chr5	140557796	140558132	(40980127)	+	L2b	LINE/L2	3055	3370	(5)	3242820
1078	30.9	3.4	4.5	chr5	141265511	141265941	(40272318)	C	LTR16C	LTR/ERVL	(0)	538	88	3243792
2563	11.9	0.8	0.0	chr5	141265942	141266293	(40271966)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3243794
15	5.5	0.0	0.0	chr5	142013246	142013264	(39524995)	+	(GT)n	Simple_repeat	1	19	(0)	3245046
14	28.5	3.1	1.5	chr5	142108653	142108717	(39429542)	+	G-rich	Low_complexity	1	67	(0)	3245269
13	4.7	0.0	4.2	chr5	142108931	142108954	(39429305)	+	(GCTC)n	Simple_repeat	1	24	(0)	3245270
13	11.5	12.2	1.8	chr5	142357141	142357189	(39181070)	+	(TCCGCC)n	Simple_repeat	1	55	(0)	3245797
352	31.3	18.5	2.8	chr5	142636462	142637055	(38901204)	C	L2a	LINE/L2	(0)	3426	2679	3246391
684	23.3	14.6	4.3	chr5	142699303	142699607	(38838652)	+	Charlie2a	DNA/hAT-Charlie	14	355	(2506)	3246505
2161	14.2	1.3	0.3	chr5	142956295	142956597	(38581662)	+	AluJr	SINE/Alu	2	307	(5)	3246955
1606	26.4	8.2	3.5	chr5	142956598	142956673	(38581586)	+	Tigger18a	DNA/TcMar-Tigger	240	312	(540)	3246954
2635	10.3	1.4	2.5	chr5	142956674	142957032	(38581227)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3246956
1930	14.3	8.8	0.6	chr5	143180481	143180824	(38357435)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3247283
2733	16.8	5.5	3.7	chr5	143322976	143323200	(38215059)	+	MER44B	DNA/TcMar-Tigger	1	250	(300)	3247499
2663	7.6	0.3	2.8	chr5	143323201	143323564	(38214695)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3247500
11009	9.4	2.6	2.0	chr5	143323565	143325135	(38213124)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3247500
2597	9.9	0.0	0.0	chr5	143325136	143325490	(38212769)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3247500
2733	16.8	5.5	3.7	chr5	143325491	143325801	(38212458)	+	MER44B	DNA/TcMar-Tigger	251	547	(3)	3247499
772	24.8	12.1	0.0	chr5	143977890	143978107	(37560152)	C	MIR	SINE/MIR	(3)	259	12	3248560
288	30.4	11.4	10.8	chr5	145965659	145966293	(35571966)	C	L2b	LINE/L2	(0)	3375	2694	3251609
2691	8.2	0.6	0.0	chr5	146730484	146730836	(34807423)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3253061
9816	11.8	3.4	1.0	chr5	147696575	147697090	(33841169)	+	THE1C-int	LTR/ERVL-MaLR	1	554	(1026)	3254707
2691	9.9	0.0	0.0	chr5	147697091	147697443	(33840816)	C	THE1A	LTR/ERVL-MaLR	(0)	355	3	3254708
9816	11.8	3.4	1.0	chr5	147697444	147698468	(33839791)	+	THE1C-int	LTR/ERVL-MaLR	555	1580	(0)	3254707
17	3.7	0.0	6.2	chr5	148826474	148826505	(32711754)	+	(GGAGG)n	Simple_repeat	1	32	(0)	3256513
230	17.6	0.4	0.4	chr5	148844015	148844066	(32694193)	+	MIR1_Amn	SINE/MIR	99	150	(58)	3256540
12576	9.3	1.5	0.0	chr5	149090188	149091744	(32446515)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3256999
2363	12.8	1.1	2.0	chr5	149091745	149092102	(32446157)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3256999
4579	18.2	1.4	2.1	chr5	149092103	149092647	(32445612)	+	L1MB8	LINE/L1	5597	6136	(42)	3256998
1778	10.4	11.0	0.7	chr5	149488252	149488520	(32049739)	+	AluSz6	SINE/Alu	1	300	(12)	3257866
1080	31.0	9.3	10.6	chr5	152504829	152506682	(29031577)	C	ERV3-16A3_I-int	LTR/ERVL	(3326)	2328	366	3263874
12	28.6	2.2	0.0	chr5	154038230	154038274	(27499985)	+	(ACACAT)n	Simple_repeat	1	46	(0)	3266297
353	24.7	19.8	0.0	chr5	154038305	154038498	(27499761)	+	MIR	SINE/MIR	2	243	(19)	3266298
904	30.1	9.5	0.9	chr5	154039154	154039664	(27498595)	C	L2b	LINE/L2	(5)	3370	2791	3266299
11	18.1	2.4	4.8	chr5	154446098	154446138	(27092121)	+	G-rich	Low_complexity	1	42	(0)	3267171
16	20.4	2.6	7.5	chr5	154446374	154446451	(27091808)	+	G-rich	Low_complexity	1	80	(0)	3267172
2387	11.9	0.6	0.6	chr5	154978281	154978635	(26559624)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3268421
2676	8.7	2.3	0.0	chr5	157396179	157396522	(24141737)	C	THE1A	LTR/ERVL-MaLR	(2)	353	2	3272624
11853	10.2	1.6	0.1	chr5	157396524	157398080	(24140179)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3272624
2386	9.4	1.4	4.4	chr5	157822048	157822212	(23716047)	+	THE1A	LTR/ERVL-MaLR	1	164	(191)	3273398
870	6.9	9.7	0.0	chr5	157822213	157822343	(23715916)	C	L1PA5	LINE/L1	(2)	6152	6008	3273399
2386	9.4	1.4	4.4	chr5	157822344	157822543	(23715716)	+	THE1A	LTR/ERVL-MaLR	165	355	(0)	3273398
15	9.1	0.0	0.0	chr5	158973807	158973830	(22564429)	+	(TAG)n	Simple_repeat	1	24	(0)	3275387
133	24.4	4.0	4.9	chr5	159098439	159098991	(22439268)	+	GA-rich	Low_complexity	1	575	(0)	3275544
26	28.6	3.4	2.4	chr5	159099239	159099357	(22438902)	+	(CCG)n	Simple_repeat	1	123	(0)	3275545
30	20.1	0.0	0.0	chr5	159099518	159099575	(22438684)	+	A-rich	Low_complexity	1	58	(0)	3275546
18	3.6	3.2	3.1	chr5	159208191	159208221	(22330038)	+	(AGC)n	Simple_repeat	1	32	(0)	3275706
2114	10.9	1.4	4.4	chr5	159265522	159265848	(22272411)	+	THE1A	LTR/ERVL-MaLR	1	313	(42)	3275810
1030	11.3	0.0	0.0	chr5	159265851	159265983	(22272276)	C	AluSx	SINE/Alu	(179)	133	1	3275811
2512	10.7	0.3	0.6	chr5	159267601	159267956	(22270303)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3275810
19	14.1	2.6	0.0	chr5	160119164	160119202	(21419057)	+	(CGG)n	Simple_repeat	1	40	(0)	3277394
13	31.6	3.2	0.0	chr5	160119325	160119386	(21418873)	+	(CGC)n	Simple_repeat	1	64	(0)	3277395
1908	15.1	2.9	2.7	chr5	161648689	161649062	(19889197)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3280013
5142	18.5	3.0	0.0	chr5	161649063	161649453	(19888806)	C	L1MC1	LINE/L1	(936)	5397	4996	3280012
11022	9.6	2.0	0.2	chr5	162834257	162835807	(18702452)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3281667
2291	11.2	1.4	1.4	chr5	162835808	162836162	(18702097)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3281667
2646	6.1	0.0	0.6	chr5	162925294	162925606	(18612653)	+	AluY	SINE/Alu	1	311	(0)	3281791
2566	7.9	0.6	0.6	chr5	162925620	162925974	(18612285)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3281792
11347	10.2	1.0	0.2	chr5	164126193	164127757	(17410502)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	3	3283586
1796	16.8	2.5	4.4	chr5	164127760	164128121	(17410138)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3283586
2552	8.0	1.4	0.6	chr5	165096551	165096902	(16441357)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3284843
2148	13.0	4.2	0.6	chr5	167748569	167748931	(13789328)	C	THE1D	LTR/ERVL-MaLR	(2)	379	3	3288799
29	18.1	2.5	3.7	chr5	168291770	168291849	(13246410)	+	(GGC)n	Simple_repeat	1	82	(0)	3289721
2734	7.9	0.6	0.0	chr5	169525144	169525496	(12012763)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3291937
36	29.5	2.3	3.9	chr5	170484539	170484713	(11053546)	+	(TTCTCT)n	Simple_repeat	1	179	(0)	3293688
22	12.0	0.0	5.9	chr5	171450714	171450764	(10087495)	+	G-rich	Low_complexity	1	51	(0)	3295312
14	21.5	4.0	1.9	chr5	171450923	171450972	(10087287)	+	(GCCCGC)n	Simple_repeat	1	52	(0)	3295313
16	19.2	2.0	3.9	chr5	171451034	171451097	(10087162)	+	(CCCCGCC)n	Simple_repeat	1	62	(0)	3295314
22	24.2	0.0	0.0	chr5	171451215	171451272	(10086987)	+	(CCCCGC)n	Simple_repeat	1	58	(0)	3295315
555	32.4	5.5	5.3	chr5	171529317	171529982	(10008277)	+	L2b	LINE/L2	2523	3223	(164)	3295512
1711	13.4	10.2	2.6	chr5	171970152	171970502	(9567757)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3296382
13	21.0	5.9	1.9	chr5	172283505	172283555	(9254704)	+	G-rich	Low_complexity	1	54	(0)	3297091
12	17.1	3.8	7.3	chr5	172283768	172283820	(9254439)	+	(CGCTC)n	Simple_repeat	1	55	(0)	3297092
14	24.9	1.3	6.6	chr5	172284016	172284090	(9254169)	+	(CCCCGGC)n	Simple_repeat	1	76	(0)	3297093
2478	4.9	0.0	0.0	chr5	172355539	172355843	(9182416)	C	AluY	SINE/Alu	(6)	305	1	3297255
1971	12.7	5.5	2.7	chr5	173837335	173837667	(7700592)	+	THE1B	LTR/ERVL-MaLR	1	343	(21)	3300399
2202	14.2	1.1	0.3	chr5	174497790	174498141	(7040118)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3301599
12483	7.9	0.3	0.0	chr5	174498142	174499716	(7038543)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3301599
647	26.7	5.4	2.2	chr5	174624550	174624870	(6913389)	+	MER102c	DNA/hAT-Charlie	12	329	(2)	3301869
479	30.3	10.2	1.3	chr5	174625037	174625240	(6913019)	+	MIR	SINE/MIR	31	250	(12)	3301870
274	33.0	0.0	2.0	chr5	174736249	174736347	(6801912)	C	MIRb	SINE/MIR	(37)	231	135	3302120
240	33.0	7.7	3.2	chr5	174736457	174736641	(6801618)	C	MIRb	SINE/MIR	(71)	197	4	3302121
239	32.0	6.1	9.6	chr5	175696400	175696586	(5841673)	+	MIRc	SINE/MIR	37	218	(50)	3303949
480	29.4	3.2	2.7	chr5	175696735	175696919	(5841340)	+	MIR	SINE/MIR	69	254	(8)	3303950
2617	9.4	0.8	0.0	chr5	176703875	176704224	(4834035)	+	THE1A	LTR/ERVL-MaLR	3	355	(0)	3305828
44	24.5	0.8	2.3	chr5	177455323	177455452	(4082807)	+	(GCGCAC)n	Simple_repeat	1	131	(0)	3307451
19	12.4	0.0	0.0	chr5	177455614	177455648	(4082611)	+	(CGGGCT)n	Simple_repeat	1	35	(0)	3307452
14	24.3	2.0	2.0	chr5	177455933	177455982	(4082277)	+	(GCCCT)n	Simple_repeat	1	51	(0)	3307453
17	25.6	4.9	2.3	chr5	177473348	177473429	(4064830)	+	(CGGCGG)n	Simple_repeat	1	86	(0)	3307481
23	20.4	2.8	2.7	chr5	177473528	177473598	(4064661)	+	(GGAC)n	Simple_repeat	1	73	(0)	3307482
18	19.2	2.1	2.1	chr5	177473639	177473691	(4064568)	+	G-rich	Low_complexity	1	53	(0)	3307483
15	28.1	2.1	6.1	chr5	177473694	177473789	(4064470)	+	(GGCCC)n	Simple_repeat	1	98	(0)	3307484
16	14.2	5.1	0.0	chr5	178113402	178113440	(3424819)	+	G-rich	Low_complexity	1	41	(0)	3308587
18	24.7	7.6	1.0	chr5	178113595	178113686	(3424573)	+	(CCGGCG)n	Simple_repeat	1	99	(0)	3308588
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
869	23.2	9.8	1.4	chr5	178598004	178598173	(2940086)	C	L1MC5a	LINE/L1	(603)	2174	1989	3309458
1880	13.6	9.9	1.7	chr5	178598174	178598517	(2939742)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3309459
869	23.2	9.8	1.4	chr5	178598518	178598626	(2939633)	C	L1MC5a	LINE/L1	(789)	1988	1869	3309458
402	21.5	14.1	6.5	chr5	178598638	178598806	(2939453)	C	L1MC5a	LINE/L1	(339)	2438	2255	3309460
269	31.8	9.8	3.1	chr5	178933031	178933192	(2605067)	+	MIR3	SINE/MIR	32	205	(3)	3310084
918	31.3	7.8	3.3	chr5	179030853	179031755	(2506504)	+	L2a	LINE/L2	2476	3426	(0)	3310258
11116	12.6	1.8	0.4	chr5	179399506	179401112	(2137147)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3310769
440	27.2	8.2	3.7	chr5	179505584	179505770	(2032489)	C	MER115	DNA/hAT-Tip100	(65)	628	433	3310953
712	28.1	8.2	0.7	chr5	179505783	179506051	(2032208)	C	MER115	DNA/hAT-Tip100	(359)	334	44	3310953
334	26.9	10.2	3.4	chr5	179528097	179528242	(2010017)	+	MIRb	SINE/MIR	72	228	(40)	3311001
13	7.5	0.0	8.8	chr5	179733063	179733096	(1805163)	+	(CCGGCC)n	Simple_repeat	1	34	(0)	3311472
15	12.4	1.9	9.3	chr5	179796027	179796079	(1742180)	+	G-rich	Low_complexity	1	54	(0)	3311604
12	24.9	5.8	0.0	chr5	179796340	179796391	(1741868)	+	(CGCGCCG)n	Simple_repeat	1	55	(0)	3311605
2489	9.9	0.8	1.1	chr5	180066090	180066445	(1471814)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3312016
33	19.2	8.1	4.0	chr5	180208834	180208993	(1329266)	+	(CCCGCCG)n	Simple_repeat	1	173	(0)	3312242
47	0.0	0.0	2.1	chr5	180209105	180209151	(1329108)	+	(CGC)n	Simple_repeat	1	47	(0)	3312243
20	31.7	0.0	3.3	chr5	180494108	180494198	(1044061)	+	GA-rich	Low_complexity	1	91	(0)	3312778
46	31.0	2.9	3.2	chr5	180494430	180494672	(1043587)	+	(GGC)n	Simple_repeat	1	250	(0)	3312779
12	20.8	0.0	2.9	chr5	180494718	180494752	(1043507)	+	(GGC)n	Simple_repeat	1	35	(0)	3312779
1434	14.8	0.3	16.2	chr6	171075	171425	(170634554)	+	AluJo	SINE/Alu	1	295	(17)	3314459
2057	15.6	3.3	3.0	chr6	171452	171814	(170634165)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3314460
11179	11.2	1.6	0.3	chr6	171815	173374	(170632605)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3314460
246	27.2	8.1	6.5	chr6	225688	225856	(170580123)	+	MIRb	SINE/MIR	12	183	(85)	3314546
13	14.4	5.0	2.4	chr6	692814	692853	(170113126)	+	G-rich	Low_complexity	1	42	(0)	3315113
25	10.8	6.0	0.0	chr6	1611568	1611617	(169194362)	+	(GGC)n	Simple_repeat	1	53	(0)	3316390
21	6.8	0.0	0.0	chr6	1611783	1611813	(169194166)	+	(CGG)n	Simple_repeat	1	31	(0)	3316391
18	3.4	2.9	5.7	chr6	1611900	1611933	(169194046)	+	(GGC)n	Simple_repeat	1	35	(0)	3316392
2682	24.4	9.6	1.3	chr6	2755738	2756682	(168049297)	C	L1MC4	LINE/L1	(440)	7602	6699	3317871
14	19.6	6.4	0.0	chr6	2765897	2765943	(168040036)	+	(GCGAGG)n	Simple_repeat	1	50	(0)	3317889
26	21.1	4.7	4.5	chr6	2766093	2766199	(168039780)	+	(GGACGA)n	Simple_repeat	1	112	(0)	3317890
447	26.8	13.5	6.6	chr6	2790449	2790811	(168015168)	C	LTR33	LTR/ERVL	(5)	510	119	3317917
32	3.0	0.0	0.0	chr6	3457092	3457125	(167348854)	+	(CTC)n	Simple_repeat	1	34	(0)	3318917
2122	14.7	4.9	3.1	chr6	3958585	3958941	(166847038)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3319706
302	27.7	6.2	7.8	chr6	4575532	4575762	(166230217)	+	L2c	LINE/L2	2272	2498	(921)	3320665
1694	20.9	6.0	0.9	chr6	4924744	4925260	(165880719)	C	Tigger9b	DNA/TcMar-Tigger	(0)	624	40	3321226
15	18.8	7.0	1.6	chr6	7541463	7541519	(163264460)	+	(GGCGCAG)n	Simple_repeat	1	61	(0)	3325356
12	9.3	5.0	7.1	chr6	7541708	7541747	(163264232)	+	(CTCCCG)n	Simple_repeat	1	42	(0)	3325357
349	31.3	0.9	3.4	chr6	7712811	7712929	(163093050)	+	L2c	LINE/L2	3258	3373	(14)	3325619
251	31.1	2.9	14.3	chr6	7712952	7713259	(163092720)	+	L2c	LINE/L2	3097	3368	(7)	3325618
11853	9.2	0.2	0.1	chr6	8044440	8046017	(162759962)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3326070
2656	8.0	0.6	0.6	chr6	8046020	8046372	(162759607)	+	THE1A	LTR/ERVL-MaLR	3	355	(0)	3326072
2481	20.0	4.7	7.5	chr6	8046373	8046450	(162759529)	+	L1MD3	LINE/L1	7914	7994	(1)	3326069
1120	16.1	0.5	0.5	chr6	8426146	8426339	(162379640)	C	Tigger4b	DNA/TcMar-Tigger	(0)	361	168	3326711
2456	9.4	0.8	0.8	chr6	8426340	8426692	(162379287)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	3326712
4951	11.5	2.3	0.0	chr6	8426696	8427414	(162378565)	+	THE1A-int	LTR/ERVL-MaLR	1	736	(844)	3326712
18	22.7	1.7	3.3	chr6	8435410	8435469	(162370510)	+	(CTC)n	Simple_repeat	1	61	(0)	3326721
2342	13.7	1.1	0.3	chr6	9994580	9994938	(160811041)	C	THE1B	LTR/ERVL-MaLR	(0)	364	3	3328805
18	24.2	7.3	0.0	chr6	11044334	11044417	(159761562)	+	(CG)n	Simple_repeat	1	90	(0)	3330624
1131	16.3	2.9	4.7	chr6	13471777	13471904	(157334075)	+	MER3	DNA/hAT-Charlie	2	124	(85)	3334319
2830	7.1	0.3	0.0	chr6	13471905	13472258	(157333721)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3334320
229	29.5	11.3	1.3	chr6	13574911	13575212	(157230767)	C	L2a	LINE/L2	(689)	2730	2395	3334514
17	18.2	1.8	5.4	chr6	13814560	13814614	(156991365)	+	G-rich	Low_complexity	1	56	(0)	3334957
2926	6.8	0.3	0.0	chr6	14891788	14892141	(155913838)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3336721
25	25.2	0.0	3.5	chr6	15245200	15245284	(155560695)	+	G-rich	Low_complexity	1	85	(0)	3337657
2258	8.9	11.0	0.0	chr6	15377146	15377461	(155428518)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3337863
18	20.1	0.0	9.3	chr6	15662681	15662755	(155143224)	+	(GGCGG)n	Simple_repeat	1	75	(0)	3338218
15	30.9	1.4	1.4	chr6	15662984	15663052	(155142927)	+	(CCGGCC)n	Simple_repeat	1	70	(0)	3338219
29	0.0	0.0	0.0	chr6	15879968	15879992	(154925987)	+	(TG)n	Simple_repeat	1	25	(0)	3338602
1380	20.2	4.6	8.3	chr6	15880549	15880675	(154925304)	+	MLT1C	LTR/ERVL-MaLR	38	170	(297)	3338603
20	20.5	0.0	0.0	chr6	16759989	16760033	(154045946)	+	(CACA)n	Simple_repeat	1	45	(0)	3340012
18	23.3	0.0	0.0	chr6	16760221	16760273	(154045706)	+	(CCT)n	Simple_repeat	1	53	(0)	3340013
14	5.0	0.0	0.0	chr6	16760461	16760481	(154045498)	+	(GGC)n	Simple_repeat	1	21	(0)	3340014
16	10.4	0.0	5.7	chr6	17987184	17987218	(152818761)	+	(CCGC)n	Simple_repeat	1	35	(0)	3342184
435	24.1	9.5	2.2	chr6	18034843	18034978	(152771001)	C	MER63A	DNA/hAT-Blackjack	(55)	155	9	3342299
530	12.1	20.0	0.0	chr6	18064504	18064619	(152741360)	C	L1MB7	LINE/L1	(15)	6169	6025	3342364
830	16.7	0.0	0.8	chr6	18064625	18064756	(152741223)	+	AluJb	SINE/Alu	3	133	(179)	3342365
1079	15.2	0.0	3.4	chr6	18064760	18064807	(152741172)	+	AluJr	SINE/Alu	135	182	(130)	3342366
2885	6.2	0.6	0.0	chr6	18064808	18065160	(152740819)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3342367
20	23.4	1.2	6.9	chr6	18155430	18155515	(152650464)	+	(GGC)n	Simple_repeat	1	87	(0)	3342550
29	8.3	1.9	1.9	chr6	18263848	18263900	(152542079)	+	(TCC)n	Simple_repeat	1	54	(0)	3342727
18	28.7	1.1	5.3	chr6	18264204	18264298	(152541681)	+	(CGCC)n	Simple_repeat	1	90	(0)	3342728
2320	9.4	2.3	0.3	chr6	19476262	19476558	(151329421)	+	AluY	SINE/Alu	1	303	(8)	3344483
2488	8.8	0.6	8.6	chr6	19476559	19476875	(151329104)	C	THE1A	LTR/ERVL-MaLR	(59)	296	1	3344482
3295	13.1	0.8	4.7	chr6	19476876	19477347	(151328632)	C	MER1A	DNA/hAT-Charlie	(64)	465	2	3344480
2767	8.8	0.3	0.0	chr6	20183760	20184113	(150621866)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3345552
270	29.1	8.8	3.1	chr6	21140543	21140744	(149665235)	+	MER20B	DNA/hAT-Charlie	5	219	(0)	3347176
670	33.1	9.6	4.8	chr6	21140763	21140775	(149665204)	+	L2c	LINE/L2	2925	2933	(454)	3347177
2759	4.8	1.1	0.3	chr6	21140776	21141127	(149664852)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3347178
30	26.5	1.1	1.1	chr6	21595008	21595099	(149210880)	+	(CGG)n	Simple_repeat	1	93	(0)	3347916
15	21.3	2.2	2.2	chr6	21595194	21595238	(149210741)	+	(GGC)n	Simple_repeat	1	46	(0)	3347917
18	28.1	0.0	0.0	chr6	21595669	21595724	(149210255)	+	(TCGTCC)n	Simple_repeat	1	56	(0)	3347918
14	22.6	0.0	4.4	chr6	21980486	21980530	(148825449)	+	(CCT)n	Simple_repeat	1	45	(0)	3348661
1885	14.2	4.5	9.8	chr6	23293057	23293453	(147512526)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3350339
15	29.0	0.0	3.2	chr6	24495062	24495130	(146310849)	+	(CCGCCC)n	Simple_repeat	1	66	(0)	3352039
2025	13.9	5.9	6.4	chr6	24750866	24751242	(146054737)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3352474
2411	5.8	0.3	0.3	chr6	26172204	26172497	(144633482)	+	AluSc8	SINE/Alu	1	294	(17)	3354760
623	2.7	0.0	0.0	chr6	26743263	26743335	(144062644)	+	tRNA-Met	tRNA	1	73	(3)	3355770
2294	13.1	0.0	0.0	chr6	27159025	27159315	(143646664)	+	AluSx	SINE/Alu	4	294	(18)	3356396
24	9.5	0.0	0.0	chr6	27332345	27332378	(143473601)	+	(T)n	Simple_repeat	1	34	(0)	3356726
1679	28.0	8.1	4.3	chr6	29999086	29999996	(140805983)	+	ERV3-16A3_I-int	LTR/ERVL	838	1893	(3103)	3360937
2815	6.9	0.3	0.0	chr6	30265888	30266234	(140539745)	C	THE1A	LTR/ERVL-MaLR	(5)	350	3	3361353
576	32.3	5.5	10.0	chr6	30266242	30266702	(140539277)	C	MLT1N2	LTR/ERVL-MaLR	(116)	446	8	3361354
2151	8.8	7.3	3.5	chr6	31053267	31053607	(139752372)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3362711
2586	7.4	4.5	0.0	chr6	31475578	31475913	(139330066)	C	THE1A	LTR/ERVL-MaLR	(3)	352	1	3363374
27	6.1	0.0	0.0	chr6	31620910	31620944	(139185035)	+	(GGTGGC)n	Simple_repeat	1	35	(0)	3363641
24	23.9	3.8	1.2	chr6	31897640	31897719	(138908260)	+	(GCC)n	Simple_repeat	1	83	(0)	3364122
1515	17.7	6.8	0.7	chr6	31907318	31907605	(138898374)	+	AluJb	SINE/Alu	1	307	(5)	3364140
387	17.5	0.0	0.0	chr6	31907612	31907674	(138898305)	C	AluJb	SINE/Alu	(45)	267	205	3364141
1718	16.4	0.3	4.2	chr6	31907680	31907841	(138898138)	C	AluJb	SINE/Alu	(13)	299	137	3364142
1832	15.4	2.6	2.3	chr6	32287168	32287473	(138518506)	+	AluJb	SINE/Alu	2	308	(4)	3364680
952	29.6	11.1	3.7	chr6	32287474	32287742	(138518237)	C	L2a	LINE/L2	(537)	2882	2574	3364679
1081	29.0	6.9	4.7	chr6	32287778	32288454	(138517525)	+	L1ME3G	LINE/L1	79	716	(208)	3364670
6172	9.6	2.0	1.3	chr6	32671215	32671736	(138134243)	C	L1PA10	LINE/L1	(0)	6353	5826	3365224
2796	7.1	0.3	0.0	chr6	32671737	32672090	(138133889)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3365225
11485	10.1	0.3	1.9	chr6	32672091	32673366	(138132613)	+	THE1A-int	LTR/ERVL-MaLR	1	1274	(306)	3365225
16	26.1	4.6	3.3	chr6	33208607	33208693	(137597286)	+	(GGCGGC)n	Simple_repeat	1	91	(0)	3365977
457	24.6	3.9	0.0	chr6	33209010	33209131	(137596848)	C	MIRc	SINE/MIR	(13)	255	129	3365978
13	21.3	1.9	5.5	chr6	33277535	33277588	(137528391)	+	(CCCTGC)n	Simple_repeat	1	55	(0)	3366124
3039	13.5	8.8	6.5	chr6	33465091	33465262	(137340717)	C	Cheshire	DNA/hAT-Charlie	(294)	2126	1962	3366487
2787	8.2	0.3	0.0	chr6	33465263	33465614	(137340365)	+	THE1A	LTR/ERVL-MaLR	3	355	(0)	3366490
12143	9.0	0.5	0.0	chr6	33465615	33467187	(137338792)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3366490
2579	9.4	1.7	2.2	chr6	33467188	33467544	(137338435)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3366490
3039	13.5	8.8	6.5	chr6	33467545	33467656	(137338323)	C	Cheshire	DNA/hAT-Charlie	(459)	1961	1860	3366487
29	18.3	1.6	0.0	chr6	34145564	34145625	(136660354)	+	(GAGC)n	Simple_repeat	1	63	(0)	3367713
18	7.0	0.0	5.9	chr6	34236747	34236780	(136569199)	+	(GCG)n	Simple_repeat	1	34	(0)	3367935
1361	15.6	0.0	13.5	chr6	34259362	34259573	(136546406)	+	L1MB3	LINE/L1	5938	6105	(576)	3367976
907	16.8	0.0	0.0	chr6	34259574	34259704	(136546275)	+	FLAM_A	SINE/Alu	1	131	(11)	3367978
1361	15.6	0.0	13.5	chr6	34259705	34259746	(136546233)	+	L1MB3	LINE/L1	6106	6143	(538)	3367976
2798	7.4	0.6	0.0	chr6	34259747	34260099	(136545880)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3367979
4828	8.6	0.5	1.2	chr6	34260100	34260175	(136545804)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1509	3367979
12	13.7	0.0	0.0	chr6	34696759	34696782	(136109197)	+	(ACTC)n	Simple_repeat	1	24	(0)	3368935
17	39.7	0.0	0.0	chr6	34696784	34696874	(136109105)	+	(CCC)n	Simple_repeat	1	91	(0)	3368936
525	27.8	8.2	2.4	chr6	35318903	35319096	(135486883)	+	MIRb	SINE/MIR	5	208	(60)	3370118
1924	9.1	6.6	2.3	chr6	35939276	35939578	(134866401)	+	THE1D	LTR/ERVL-MaLR	1	317	(64)	3371489
2711	8.5	0.6	0.0	chr6	35939580	35939932	(134866047)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3371490
12139	8.3	1.2	0.0	chr6	35939933	35941493	(134864486)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3371490
2718	9.0	3.3	2.6	chr6	35941494	35941915	(134864064)	+	THE1A	LTR/ERVL-MaLR	1	428	(0)	3371490
14	29.1	2.5	3.7	chr6	36986351	36986430	(133819549)	+	G-rich	Low_complexity	1	82	(0)	3373670
35	32.1	0.0	3.2	chr6	37819784	37819806	(132986173)	+	(CCCGCC)n	Simple_repeat	1	35	(115)	3375438
19	11.5	8.1	4.5	chr6	37819807	37819868	(132986111)	+	(CGCC)n	Simple_repeat	1	67	(0)	3375439
35	32.1	0.0	3.2	chr6	37819869	37819939	(132986040)	+	(CCCGCC)n	Simple_repeat	36	150	(0)	3375438
19	29.4	3.2	4.1	chr6	37820031	37820194	(132985785)	+	G-rich	Low_complexity	1	162	(0)	3375440
2153	14.0	0.0	0.7	chr6	37976300	37976606	(132829373)	+	AluSz	SINE/Alu	1	305	(7)	3375717
1845	12.9	6.6	5.1	chr6	37976607	37976938	(132829041)	C	THE1D	LTR/ERVL-MaLR	(32)	349	1	3375716
2601	24.5	12.8	1.2	chr6	37976939	37977007	(132828972)	C	L1ME1	LINE/L1	(1917)	4229	4162	3375714
823	18.8	43.7	0.0	chr6	37977009	37977248	(132828731)	C	Tigger3a	DNA/TcMar-Tigger	(2)	346	1	3375718
18	30.4	1.7	5.1	chr6	38639870	38639984	(132165995)	+	(CGCCGC)n	Simple_repeat	1	117	(0)	3376682
406	22.2	4.9	1.7	chr6	38640395	38640513	(132165466)	+	MIRc	SINE/MIR	115	237	(31)	3376683
1924	13.2	0.0	0.7	chr6	38640526	38640806	(132165173)	+	AluJb	SINE/Alu	11	289	(23)	3376684
323	24.4	3.7	0.0	chr6	39059526	39059603	(131746376)	+	MIR	SINE/MIR	63	143	(119)	3377401
628	21.0	9.9	14.4	chr6	40616280	40616535	(130189444)	+	LTR40a	LTR/ERVL	6	248	(271)	3379783
1056	21.6	1.3	4.6	chr6	40616548	40616728	(130189251)	C	MLT1A	LTR/ERVL-MaLR	(144)	230	59	3379784
2170	13.6	4.7	2.8	chr6	40616729	40617085	(130188894)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3379785
29	0.0	0.0	0.0	chr6	42929620	42929646	(127876333)	+	(TGC)n	Simple_repeat	1	27	(0)	3384362
182	32.1	10.7	9.9	chr6	42929876	42930228	(127875751)	C	L2c	LINE/L2	(70)	3317	2962	3384363
14	16.6	2.3	4.4	chr6	42984625	42984668	(127821311)	+	(AGCCGG)n	Simple_repeat	1	45	(0)	3384478
12	18.8	2.6	2.6	chr6	43575960	43575997	(127229982)	+	(GCGGCGG)n	Simple_repeat	1	39	(0)	3385604
19	16.6	4.3	0.0	chr6	43576024	43576070	(127229909)	+	(GCCCGC)n	Simple_repeat	1	49	(0)	3385605
1771	22.2	10.5	0.7	chr6	43952724	43953213	(126852766)	+	L2a	LINE/L2	2880	3418	(8)	3386313
473	23.8	20.4	0.0	chr6	43953451	43953618	(126852361)	C	MIRb	SINE/MIR	(8)	260	50	3386314
13	14.9	5.1	2.4	chr6	45377470	45377508	(125428471)	+	(CAGCC)n	Simple_repeat	1	41	(0)	3388537
14	13.7	3.1	0.0	chr6	45377643	45377674	(125428305)	+	G-rich	Low_complexity	1	33	(0)	3388538
34	19.1	5.3	3.3	chr6	45422015	45422128	(125383851)	+	(GCG)n	Simple_repeat	1	120	(0)	3388617
2764	9.4	1.1	2.2	chr6	45603654	45604021	(125201958)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3388857
276	32.4	9.7	8.5	chr6	46056976	46057150	(124748829)	+	L2c	LINE/L2	2594	2748	(671)	3389644
2684	9.0	0.3	0.0	chr6	46057151	46057504	(124748475)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3389645
276	32.4	9.7	8.5	chr6	46057505	46057645	(124748334)	+	L2c	LINE/L2	2749	2913	(506)	3389644
2230	13.0	2.8	0.3	chr6	46945713	46946067	(123859912)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3390979
408	33.2	11.5	3.6	chr6	46946116	46946674	(123859305)	C	L2a	LINE/L2	(1135)	2284	1676	3390978
15	0.0	0.0	0.0	chr6	47478192	47478210	(123327769)	+	(GGA)n	Simple_repeat	1	19	(0)	3391825
2351	11.7	0.8	0.3	chr6	47990379	47990730	(122815249)	+	THE1A	LTR/ERVL-MaLR	1	354	(1)	3392575
390	33.0	9.7	8.7	chr6	47990731	47990894	(122815085)	+	L1MEd	LINE/L1	841	1009	(6094)	3392574
2556	8.8	4.2	0.0	chr6	52169085	52169424	(118636555)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3398087
11327	9.4	1.5	0.4	chr6	52169425	52170986	(118634993)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3398087
2714	8.0	1.1	0.0	chr6	52170987	52171337	(118634642)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3398087
13	31.9	1.7	0.0	chr6	52421070	52421127	(118384852)	+	(TCTTTCT)n	Simple_repeat	1	59	(0)	3398524
12	12.2	3.7	0.0	chr6	52576573	52576599	(118229380)	+	(GGCAT)n	Simple_repeat	1	28	(0)	3398745
19	7.2	0.0	0.0	chr6	53544648	53544676	(117261303)	+	(CCT)n	Simple_repeat	1	29	(0)	3400325
12	23.5	2.5	0.0	chr6	53544953	53544992	(117260987)	+	(GCGGCG)n	Simple_repeat	1	41	(0)	3400326
11982	8.8	0.8	0.8	chr6	53552068	53553648	(117252331)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3400339
2708	9.0	0.3	0.0	chr6	53553649	53554002	(117251977)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3400339
5007	10.4	6.1	8.3	chr6	53554003	53554263	(117251716)	+	MER4D1	LTR/ERV1	669	898	(2)	3400337
2529	7.9	4.2	0.0	chr6	54152339	54152678	(116653301)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3401257
2317	12.4	0.6	5.2	chr6	54795905	54796105	(116009874)	C	THE1B	LTR/ERVL-MaLR	(0)	364	177	3402128
2507	11.1	0.6	0.0	chr6	54796106	54796458	(116009521)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3402129
11590	9.8	0.3	0.1	chr6	54796459	54798035	(116007944)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3402129
2669	23.9	9.6	1.5	chr6	55471708	55472586	(115333393)	C	L1ME3A	LINE/L1	(24)	6567	5609	3402973
25	0.0	0.0	0.0	chr6	56542429	56542455	(114263524)	+	(A)n	Simple_repeat	1	27	(0)	3404286
13	20.1	1.7	8.2	chr6	63572479	63572538	(107233441)	+	(CGGCT)n	Simple_repeat	1	61	(0)	3410802
34	24.6	2.0	1.0	chr6	63572569	63572666	(107233313)	+	(GCC)n	Simple_repeat	1	100	(0)	3410803
742	29.8	8.0	6.4	chr6	64922954	64923102	(105882877)	C	L1PA15-16	LINE/L1	(5175)	1974	1801	3412473
2527	11.1	0.6	0.0	chr6	64923103	64923455	(105882524)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3412474
15	20.2	0.0	0.0	chr6	69232974	69233007	(101572972)	+	(GCT)n	Simple_repeat	1	34	(0)	3417699
2620	9.9	0.3	0.0	chr6	69806789	69807142	(100998837)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3418442
11617	9.5	0.7	0.0	chr6	69807143	69808711	(100997268)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3418442
16	0.0	0.0	0.0	chr6	69867094	69867110	(100938869)	+	(T)n	Simple_repeat	1	17	(0)	3418527
12	20.2	2.9	0.0	chr6	70668264	70668297	(100137682)	+	(GGCG)n	Simple_repeat	1	35	(0)	3419586
16	19.1	6.2	2.9	chr6	71289104	71289167	(99516812)	+	(AGGCGCCG)n	Simple_repeat	1	68	(0)	3420396
9608	12.7	5.7	3.9	chr6	71624616	71626213	(99179766)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3420859
2653	14.7	1.0	6.2	chr6	73506277	73506303	(97299676)	+	L1MB3	LINE/L1	6138	6162	(21)	3423612
2396	11.3	0.6	3.8	chr6	73506304	73506670	(97299309)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3423615
2653	14.7	1.0	6.2	chr6	73506671	73506682	(97299297)	+	L1MB3	LINE/L1	6163	6171	(12)	3423612
2363	8.5	0.0	3.8	chr6	73506683	73507000	(97298979)	C	AluSq2	SINE/Alu	(7)	306	1	3423616
2465	8.0	5.3	0.3	chr6	73845768	73846104	(96959875)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3424314
8528	11.4	1.6	1.0	chr6	73846105	73847135	(96958844)	C	L1MA2	LINE/L1	(2254)	5311	4272	3424313
14	21.6	0.0	2.5	chr6	75205781	75205820	(95600159)	+	(GGCAGC)n	Simple_repeat	1	40	(0)	3425881
12461	14.7	4.3	2.4	chr6	75567984	75568645	(95237334)	+	L1PA10	LINE/L1	117	867	(5486)	3426409
2700	8.5	0.3	0.0	chr6	75568646	75568999	(95236980)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3426410
12461	14.7	4.3	2.4	chr6	75569000	75569718	(95236261)	+	L1PA10	LINE/L1	868	1575	(4778)	3426409
30	30.4	2.2	2.8	chr6	75601788	75601926	(95204053)	+	(GGC)n	Simple_repeat	1	142	(0)	3426464
2265	11.7	1.1	4.1	chr6	76898622	76898987	(93906992)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3428208
985	26.3	8.9	2.5	chr6	76899059	76899382	(93906597)	+	MLT1A0	LTR/ERVL-MaLR	19	365	(0)	3428209
11356	10.6	0.8	0.1	chr6	77962245	77963814	(92842165)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3429425
2203	14.0	1.1	0.3	chr6	77963815	77964166	(92841813)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3429425
4332	16.1	6.2	1.0	chr6	77964167	77964980	(92840999)	C	L1PA16	LINE/L1	(1729)	4417	3559	3429424
1426	26.9	9.6	1.2	chr6	78747366	78748262	(92057717)	C	L1MEg	LINE/L1	(3291)	3028	2041	3430364
2534	10.7	0.3	0.3	chr6	78748291	78748645	(92057334)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3430365
2506	28.1	8.3	3.0	chr6	78748682	78749246	(92056733)	C	L1MEg	LINE/L1	(4841)	1574	970	3430364
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
14	10.4	2.9	5.6	chr6	79947341	79947375	(90858604)	+	(CGG)n	Simple_repeat	1	36	(0)	3431997
13	18.8	4.5	2.2	chr6	79947434	79947477	(90858502)	+	(GCGGCAG)n	Simple_repeat	1	46	(0)	3431998
16	0.0	4.3	0.0	chr6	79947629	79947651	(90858328)	+	(CCCT)n	Simple_repeat	1	24	(0)	3431999
17	12.0	2.6	2.6	chr6	82364685	82364722	(88441257)	+	(GCAGGA)n	Simple_repeat	1	39	(0)	3435072
348	23.9	9.1	2.3	chr6	82933759	82933891	(87872088)	+	L1MEi	LINE/L1	54	196	(2016)	3435817
2132	14.8	2.6	0.8	chr6	82933964	82934337	(87871642)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3435818
14	19.1	6.2	4.3	chr6	83708967	83709031	(87096948)	+	(CCCTGGC)n	Simple_repeat	1	69	(0)	3436867
12	20.8	0.0	2.9	chr6	83709044	83709078	(87096901)	+	(CCG)n	Simple_repeat	1	35	(0)	3436868
16	7.8	0.0	3.5	chr6	84033787	84033815	(86772164)	+	(GGC)n	Simple_repeat	1	29	(0)	3437334
20	22.7	0.0	1.9	chr6	84763995	84764047	(86041932)	+	(CGC)n	Simple_repeat	1	53	(0)	3438230
14	8.2	3.9	0.0	chr6	84764182	84764207	(86041772)	+	(CCCG)n	Simple_repeat	1	27	(0)	3438231
749	27.4	1.6	0.0	chr6	85660707	85660954	(85145025)	C	L1MEd	LINE/L1	(6136)	950	699	3439387
1771	11.4	7.9	7.4	chr6	87965843	87966028	(82839951)	+	THE1D	LTR/ERVL-MaLR	1	211	(170)	3442512
30	0.0	0.0	0.0	chr6	87966029	87966054	(82839925)	+	(CT)n	Simple_repeat	1	26	(0)	3442513
1771	11.4	7.9	7.4	chr6	87966055	87966246	(82839733)	+	THE1D	LTR/ERVL-MaLR	212	381	(0)	3442512
13	21.1	2.6	0.0	chr6	89081020	89081057	(81724922)	+	(ACCCCGG)n	Simple_repeat	1	39	(0)	3444134
466	23.9	2.5	1.7	chr6	89260629	89260747	(81545232)	C	MER5A	DNA/hAT-Charlie	(9)	180	61	3444459
24	13.5	0.0	0.0	chr6	89411922	89411962	(81394017)	+	(CTC)n	Simple_repeat	1	41	(0)	3444714
13	23.5	0.0	0.0	chr6	89412325	89412359	(81393620)	+	(CGCG)n	Simple_repeat	1	35	(0)	3444715
32	3.0	0.0	0.0	chr6	90296785	90296818	(80509161)	+	(GCT)n	Simple_repeat	1	34	(0)	3446171
23	21.4	3.8	2.2	chr6	90297035	90297105	(80508874)	+	G-rich	Low_complexity	1	72	(0)	3446172
15	17.6	0.0	4.8	chr6	95577454	95577495	(75228484)	+	(GCCCC)n	Simple_repeat	1	42	(0)	3452635
2631	7.4	0.8	6.1	chr6	95675010	95675384	(75130595)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3452758
385	34.1	9.6	6.6	chr6	96340813	96340990	(74464989)	C	L1MCa	LINE/L1	(6048)	1080	914	3453621
2191	14.0	1.1	0.8	chr6	96340991	96341344	(74464635)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3453625
11673	9.3	0.6	0.1	chr6	96341345	96342915	(74463064)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3453625
2279	12.2	1.1	1.1	chr6	96342916	96343270	(74462709)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3453625
385	34.1	9.6	6.6	chr6	96343271	96343513	(74462466)	C	L1MCa	LINE/L1	(6215)	913	645	3453621
10452	13.9	0.3	0.9	chr6	98142409	98144046	(72661933)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	4	3455895
211	27.1	0.0	0.0	chr6	99588505	99588552	(71217427)	+	L2a	LINE/L2	3377	3424	(2)	3457915
247	24.2	1.6	1.6	chr6	99588556	99588618	(71217361)	C	L2a	LINE/L2	(16)	3410	3348	3457916
19	25.9	2.7	2.7	chr6	101393655	101393727	(69412252)	+	(GCC)n	Simple_repeat	1	75	(0)	3460229
14	17.5	0.0	0.0	chr6	101393797	101393828	(69412151)	+	(CCACC)n	Simple_repeat	1	32	(0)	3460230
1774	16.3	6.9	1.4	chr6	101657132	101657485	(69148494)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3460605
2882	18.8	7.0	1.1	chr6	102043179	102043864	(68762115)	C	L1MA7	LINE/L1	(22)	6269	5505	3461087
1103	19.6	1.0	0.0	chr6	102043865	102044063	(68761916)	+	THE1A	LTR/ERVL-MaLR	155	355	(0)	3461088
13	23.8	2.2	2.1	chr6	104859847	104859892	(65946087)	+	(CCG)n	Simple_repeat	1	47	(0)	3464541
25	21.4	9.3	2.1	chr6	105402895	105403023	(65402956)	+	G-rich	Low_complexity	1	141	(0)	3465369
14	14.6	0.0	3.1	chr6	105403119	105403171	(65402808)	+	(CGG)n	Simple_repeat	1	51	(0)	3465370
14	19.9	3.5	5.1	chr6	106975331	106975391	(63830588)	+	G-rich	Low_complexity	1	60	(0)	3467862
60	18.2	1.6	0.8	chr6	107490249	107490375	(63315604)	+	(GCG)n	Simple_repeat	1	129	(0)	3468955
31	19.1	4.7	1.1	chr6	107490483	107490568	(63315411)	+	(CCGCCA)n	Simple_repeat	1	90	(0)	3468956
25	31.7	1.0	1.9	chr6	107490569	107490584	(63315395)	+	(CCG)n	Simple_repeat	1	103	(0)	3468957
465	23.7	11.9	1.3	chr6	107768237	107768394	(63037585)	+	MLT1J	LTR/ERVL-MaLR	336	512	(0)	3469349
252	28.8	4.3	2.9	chr6	107768406	107768541	(63037438)	C	Tigger15a	DNA/TcMar-Tigger	(83)	632	495	3469351
17	20.6	0.0	4.2	chr6	107768739	107768786	(63037193)	+	(TAT)n	Simple_repeat	1	48	(0)	3469352
24	23.5	3.6	2.3	chr6	107958112	107958194	(62847785)	+	(GCC)n	Simple_repeat	1	86	(0)	3469654
2841	6.3	1.1	0.0	chr6	108014571	108014921	(62791058)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3469792
11624	10.0	0.9	0.4	chr6	108014922	108016492	(62789487)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3469792
2594	9.4	1.4	0.3	chr6	108016493	108016843	(62789136)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3469792
13	20.8	0.0	0.0	chr6	108134183	108134215	(62671764)	+	(CCCTCC)n	Simple_repeat	1	33	(0)	3470017
25	22.3	0.0	4.1	chr6	108260931	108261003	(62544976)	+	(GCC)n	Simple_repeat	1	73	(0)	3470262
19	11.7	0.0	0.0	chr6	109051145	109051172	(61754807)	+	(A)n	Simple_repeat	1	28	(0)	3471555
2513	6.3	1.6	0.3	chr6	110220444	110220744	(60585235)	C	AluY	SINE/Alu	(6)	305	1	3473316
1896	13.7	3.6	4.9	chr6	110220745	110220980	(60584999)	C	THE1B	LTR/ERVL-MaLR	(137)	227	1	3473315
2161	13.5	1.7	0.8	chr6	110525888	110526239	(60279740)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3473797
11425	8.3	2.9	0.0	chr6	110770596	110772130	(60033849)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3474272
2325	11.1	0.8	1.7	chr6	110772131	110772488	(60033491)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3474272
2760	7.7	0.6	0.0	chr6	111061392	111061744	(59744235)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3474955
2675	13.2	0.0	0.6	chr6	111189525	111189890	(59616089)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3475189
15	27.4	0.0	0.0	chr6	111259600	111259647	(59546332)	+	(AGGCGG)n	Simple_repeat	1	48	(0)	3475317
456	22.7	4.3	2.1	chr6	111259722	111259858	(59546121)	+	MIRc	SINE/MIR	15	156	(74)	3475318
242	33.5	6.3	0.6	chr6	111976010	111976189	(58829790)	+	L2c	LINE/L2	1623	1813	(1606)	3476470
250	33.8	5.0	6.1	chr6	111976219	111976562	(58829417)	+	L2c	LINE/L2	1928	2267	(1152)	3476470
1931	12.6	18.7	0.6	chr6	112002261	112002610	(58803369)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3476505
11363	10.6	0.3	0.1	chr6	112608461	112610036	(58195943)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3477329
2030	10.9	9.3	4.2	chr6	112610039	112610243	(58195736)	+	THE1A	LTR/ERVL-MaLR	3	237	(118)	3477330
2435	9.9	0.0	0.0	chr6	112610244	112610547	(58195432)	+	AluSx	SINE/Alu	5	308	(4)	3477331
355	26.8	1.4	0.0	chr6	113593134	113593240	(57212739)	+	MIRc	SINE/MIR	1	112	(118)	3478722
2141	14.8	3.6	3.3	chr6	113593299	113593661	(57212318)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3478723
14	15.3	2.6	2.6	chr6	113970813	113970850	(56835129)	+	(GCCCG)n	Simple_repeat	1	39	(0)	3479421
26	0.0	0.0	0.0	chr6	113970946	113970970	(56835009)	+	(CTG)n	Simple_repeat	1	25	(0)	3479422
16	0.0	0.0	4.2	chr6	113971649	113971672	(56834307)	+	(TTA)n	Simple_repeat	1	24	(0)	3479423
919	19.1	10.8	2.3	chr6	114167396	114167615	(56638364)	C	MIR	SINE/MIR	(9)	253	13	3479738
2126	14.0	1.1	0.8	chr6	115781681	115782034	(55023945)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3481721
18	24.6	0.0	0.0	chr6	116100826	116100873	(54705106)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3482130
2864	7.0	0.0	0.0	chr6	116589618	116589972	(54216007)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3482774
216	31.4	0.0	8.2	chr6	116680803	116680875	(54125104)	+	L2a	LINE/L2	3322	3388	(38)	3482933
14	22.6	2.4	0.0	chr6	116680890	116680930	(54125049)	+	(GAAT)n	Simple_repeat	1	42	(0)	3482934
37	0.0	0.0	0.0	chr6	116681112	116681145	(54124834)	+	(CCG)n	Simple_repeat	1	34	(0)	3482935
11	18.8	4.3	4.2	chr6	117482790	117482835	(53323144)	+	(CGGCGG)n	Simple_repeat	1	48	(0)	3483950
23	25.6	3.5	1.1	chr6	117482937	117483021	(53322958)	+	G-rich	Low_complexity	1	88	(0)	3483951
39	4.6	0.0	0.0	chr6	117907178	117907222	(52898757)	+	(GCC)n	Simple_repeat	1	45	(0)	3484466
15	0.0	4.0	3.9	chr6	117907478	117907502	(52898477)	+	(CGG)n	Simple_repeat	1	26	(0)	3484467
18	29.5	3.6	1.1	chr6	117907700	117907783	(52898196)	+	(CGC)n	Simple_repeat	1	87	(0)	3484468
14	14.6	5.0	2.4	chr6	117907906	117907945	(52898034)	+	(GGCGG)n	Simple_repeat	1	42	(0)	3484469
17	15.4	3.6	5.2	chr6	117907946	117907959	(52898020)	+	G-rich	Low_complexity	3	58	(0)	3484470
2264	10.7	0.0	0.0	chr6	118093036	118093326	(52712653)	+	AluSx4	SINE/Alu	1	291	(19)	3484707
8833	12.0	9.5	1.7	chr6	118093327	118093371	(52712608)	+	THE1B-int	LTR/ERVL-MaLR	1551	1580	(0)	3484706
2423	12.4	0.8	0.3	chr6	118093372	118093726	(52712253)	+	THE1B	LTR/ERVL-MaLR	3	360	(4)	3484706
2105	13.4	2.0	3.9	chr6	118447785	118448140	(52357839)	C	THE1B	LTR/ERVL-MaLR	(15)	349	1	3485178
305	27.8	12.9	8.8	chr6	118651557	118651749	(52154230)	C	L1M4b	LINE/L1	(6265)	602	401	3485446
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
2713	9.0	0.0	0.0	chr6	119732204	119732558	(51073421)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3486951
17	15.7	5.5	6.5	chr6	122610433	122610505	(48195474)	+	(GAGCGC)n	Simple_repeat	1	77	(0)	3490622
2222	12.6	8.9	0.8	chr6	124161058	124161450	(46644529)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3492653
11174	10.5	1.1	0.6	chr6	124569781	124571352	(46234627)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3493179
2443	10.3	1.4	0.0	chr6	124571353	124571702	(46234277)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3493179
265	34.4	11.0	3.0	chr6	124571703	124572068	(46233911)	+	L2	LINE/L2	1650	2048	(1371)	3493173
2206	13.3	3.0	3.3	chr6	124847931	124848295	(45957684)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3493480
14	28.1	0.0	0.0	chr6	125174991	125175034	(45630945)	+	(ATATGT)n	Simple_repeat	1	44	(0)	3493977
1369	14.9	1.4	0.0	chr6	125457334	125457548	(45348431)	C	L1MCa	LINE/L1	(516)	5992	5775	3494364
2735	9.7	1.1	0.0	chr6	125457558	125457906	(45348073)	C	THE1A	LTR/ERVL-MaLR	(2)	353	1	3494365
2873	7.4	0.6	1.4	chr6	125459347	125459702	(45346277)	C	THE1A	LTR/ERVL-MaLR	(2)	353	1	3494365
13	13.1	0.0	0.0	chr6	125790897	125790921	(45015058)	+	(CCT)n	Simple_repeat	1	25	(0)	3494827
3033	15.7	7.6	2.7	chr6	125950424	125950769	(44855210)	+	MER67B	LTR/ERV1	1	365	(296)	3495070
2705	8.5	0.3	0.0	chr6	125950770	125951123	(44854856)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3495071
3033	15.7	7.6	2.7	chr6	125951124	125951404	(44854575)	+	MER67B	LTR/ERV1	366	661	(0)	3495070
15	8.8	0.0	0.0	chr6	127515788	127515811	(43290168)	+	(GCC)n	Simple_repeat	1	24	(0)	3496998
14	33.6	1.5	0.0	chr6	127516059	127516125	(43289854)	+	(CCCCCT)n	Simple_repeat	1	68	(0)	3496999
15	31.1	4.4	2.1	chr6	130018460	130018550	(40787429)	+	(CAG)n	Simple_repeat	1	95	(0)	3500309
2212	11.2	3.4	2.6	chr6	131073631	131074008	(39731971)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3501789
651	25.2	2.6	2.6	chr6	131074009	131074040	(39731939)	C	L1M5	LINE/L1	(1897)	4249	4218	3501788
750	18.1	0.8	0.0	chr6	131074061	131074176	(39731803)	+	AluJo	SINE/Alu	1	117	(195)	3501790
24	28.1	2.5	4.1	chr6	131135502	131135621	(39670358)	+	(GCTGCC)n	Simple_repeat	1	123	(0)	3501897
18	24.2	3.3	5.3	chr6	131135644	131135734	(39670245)	+	(CCGCCT)n	Simple_repeat	1	94	(0)	3501898
14	17.6	2.5	2.4	chr6	131950864	131950903	(38855076)	+	(GCCGCA)n	Simple_repeat	1	41	(0)	3503156
13	16.8	0.0	5.4	chr6	131950933	131950969	(38855010)	+	(GCCCG)n	Simple_repeat	1	37	(0)	3503157
15	21.1	2.2	2.1	chr6	132814792	132814837	(37991142)	+	G-rich	Low_complexity	1	47	(0)	3504376
12	24.8	0.0	5.7	chr6	133241192	133241244	(37564735)	+	(CCCCCGG)n	Simple_repeat	1	53	(0)	3504977
2586	8.9	2.3	0.0	chr6	134150470	134150816	(36655163)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3506279
12039	9.4	0.2	0.2	chr6	134150817	134152397	(36653582)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3506279
2825	7.9	0.3	0.0	chr6	134152398	134152751	(36653228)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3506279
218	27.2	3.6	4.7	chr6	134152795	134152879	(36653100)	C	L2a	LINE/L2	(293)	3082	2999	3506278
28	2.7	0.0	6.8	chr6	135181329	135181372	(35624607)	+	(TCC)n	Simple_repeat	1	44	(0)	3508088
345	28.4	12.4	3.1	chr6	135677578	135677645	(35128334)	C	MIR	SINE/MIR	(0)	262	181	3508772
1964	12.7	6.3	1.4	chr6	135677646	135678006	(35127973)	+	THE1D	LTR/ERVL-MaLR	1	380	(1)	3508773
345	28.4	12.4	3.1	chr6	135678007	135678097	(35127882)	C	MIR	SINE/MIR	(82)	180	86	3508772
11444	10.2	0.9	0.5	chr6	135761658	135763229	(35042750)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3508924
2466	10.5	1.1	0.6	chr6	135763230	135763582	(35042397)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3508924
263	30.8	5.2	3.2	chr6	136130666	136130695	(34675284)	+	L2a	LINE/L2	3320	3347	(79)	3509407
2238	11.8	4.4	3.1	chr6	136130696	136131053	(34674926)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	3509408
14881	7.9	0.7	1.0	chr6	136223991	136225469	(34580510)	+	L1PA8A	LINE/L1	4636	6118	(13)	3509535
1770	12.7	0.3	1.3	chr6	136225479	136225763	(34580216)	C	THE1B	LTR/ERVL-MaLR	(25)	403	57	3509538
539	33.3	7.1	0.0	chr6	136398160	136398393	(34407586)	+	MIRb	SINE/MIR	3	254	(14)	3509817
2191	13.9	0.8	0.8	chr6	136398450	136398804	(34407175)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3509818
13	10.4	2.9	5.6	chr6	136792031	136792065	(34013914)	+	(CCTCGC)n	Simple_repeat	1	36	(0)	3510465
29	0.0	0.0	0.0	chr6	136792542	136792569	(34013410)	+	(CGCCG)n	Simple_repeat	1	28	(0)	3510466
2633	7.7	0.8	0.3	chr6	137207455	137207807	(33598172)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3511117
11602	8.8	1.5	0.2	chr6	137207808	137209364	(33596615)	+	THE1A-int	LTR/ERVL-MaLR	1	1578	(2)	3511117
2688	8.2	0.6	0.6	chr6	137209367	137209721	(33596258)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3511117
19	0.0	0.0	0.0	chr6	137278315	137278335	(33527644)	+	(A)n	Simple_repeat	1	21	(0)	3511240
17	8.1	0.0	0.0	chr6	138107093	138107118	(32698861)	+	(GGC)n	Simple_repeat	1	26	(0)	3512465
24	16.1	7.0	1.3	chr6	138107346	138107416	(32698563)	+	(CGGAG)n	Simple_repeat	1	76	(0)	3512466
385	31.8	5.2	5.6	chr6	138107872	138108104	(32697875)	+	L2b	LINE/L2	3139	3370	(5)	3512467
16	9.1	5.4	2.6	chr6	138692177	138692213	(32113766)	+	(CAGA)n	Simple_repeat	1	39	(0)	3513357
26	21.3	0.0	2.9	chr6	138692906	138692974	(32113005)	+	G-rich	Low_complexity	1	69	(0)	3513358
15	4.7	0.0	0.0	chr6	138693080	138693101	(32112878)	+	(GGC)n	Simple_repeat	1	22	(0)	3513359
12	19.4	0.0	5.1	chr6	138693300	138693338	(32112641)	+	(CCGCGC)n	Simple_repeat	1	39	(0)	3513360
12710	7.5	1.3	1.4	chr6	138731649	138732016	(32073963)	C	THE1A-int	LTR/ERVL-MaLR	(1209)	371	1	3513425
2590	9.2	2.2	1.1	chr6	138732017	138732367	(32073612)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3513425
376	25.6	1.1	0.0	chr6	138773147	138773232	(32032747)	+	MIRb	SINE/MIR	107	193	(75)	3513522
13	22.8	5.9	0.0	chr6	138773803	138773853	(32032126)	+	(GGCTGT)n	Simple_repeat	1	54	(0)	3513523
30	34.8	0.0	0.0	chr6	139373348	139373463	(31432516)	+	(GCC)n	Simple_repeat	1	116	(0)	3514554
8501	10.4	1.1	0.5	chr6	141078922	141080211	(29725768)	+	L1PB1	LINE/L1	2909	4206	(2656)	3516821
2472	11.8	0.0	1.1	chr6	141080212	141080570	(29725409)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3516822
11394	10.4	1.0	0.1	chr6	141080571	141082135	(29723844)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3516822
2286	12.6	4.1	1.4	chr6	141462435	141462788	(29343191)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3517296
562	29.4	2.1	1.8	chr6	141462794	141463074	(29342905)	C	L1M5	LINE/L1	(1448)	4698	4417	3517297
1052	30.5	3.1	1.1	chr6	141965627	141965974	(28840005)	+	L2	LINE/L2	2431	2785	(634)	3517909
182	21.9	0.0	0.0	chr6	141965977	141966008	(28839971)	+	L2	LINE/L2	2759	2790	(629)	3517909
296	25.8	4.8	11.0	chr6	141966009	141966049	(28839930)	+	L1M5	LINE/L1	4516	4554	(1592)	3517910
1899	15.0	4.1	3.1	chr6	141966050	141966407	(28839572)	C	THE1B	LTR/ERVL-MaLR	(0)	364	3	3517911
2408	11.1	0.8	0.6	chr6	141992827	141993180	(28812799)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3517933
1917	8.4	1.1	0.0	chr6	141993181	141993454	(28812525)	+	THE1A-int	LTR/ERVL-MaLR	1	277	(1303)	3517933
1398	7.9	0.5	0.0	chr6	141993451	141993640	(28812339)	+	THE1A	LTR/ERVL-MaLR	165	355	(0)	3517933
12	9.3	0.0	4.0	chr6	142301821	142301845	(28504134)	+	(CGC)n	Simple_repeat	1	25	(0)	3518336
365	32.9	12.9	1.3	chr6	142378329	142378485	(28427494)	+	MamTip2	DNA/hAT-Tip100	33	210	(95)	3518438
2175	10.0	5.0	1.9	chr6	142428483	142428850	(28377129)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	3518493
2268	14.8	2.3	4.2	chr6	142586876	142587180	(28218799)	+	LTR59	LTR/ERV1	151	451	(146)	3518692
2554	10.2	0.6	0.0	chr6	142587181	142587533	(28218446)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3518693
2268	14.8	2.3	4.2	chr6	142587534	142587677	(28218302)	+	LTR59	LTR/ERV1	452	591	(6)	3518692
14	8.5	0.0	3.7	chr6	142946113	142946139	(27859840)	+	(GAGG)n	Simple_repeat	1	27	(0)	3519179
19	19.3	1.5	6.0	chr6	142946358	142946423	(27859556)	+	GA-rich	Low_complexity	1	67	(0)	3519180
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
19	16.3	0.0	0.0	chr6	143511562	143511597	(27294382)	+	(GCA)n	Simple_repeat	1	36	(0)	3519988
2574	10.3	1.1	0.0	chr6	143872554	143872904	(26933075)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3520538
242	31.5	9.8	1.1	chr6	143976120	143976212	(26829767)	C	L2c	LINE/L2	(158)	3229	3128	3520640
189	31.5	6.3	7.3	chr6	143976177	143976272	(26829707)	C	L3	LINE/CR1	(19)	4080	3986	3520641
19	8.3	0.0	0.0	chr6	143976277	143976302	(26829677)	+	(T)n	Simple_repeat	1	26	(0)	3520642
364	24.8	12.0	3.0	chr6	144006335	144006469	(26799510)	C	L1ME3B	LINE/L1	(61)	6181	5963	3520692
496	29.8	10.4	6.3	chr6	144006469	144006786	(26799193)	C	L1ME3E	LINE/L1	(241)	6001	5648	3520693
409	24.6	12.6	3.8	chr6	144006787	144007023	(26798956)	C	MER112	DNA/hAT-Charlie	(0)	261	1	3520694
496	29.8	10.4	6.3	chr6	144007024	144007101	(26798878)	C	L1ME3E	LINE/L1	(595)	5647	5587	3520693
2503	11.3	0.0	0.0	chr6	144069266	144069574	(26736405)	+	AluSx1	SINE/Alu	1	309	(3)	3520798
2570	11.9	1.1	1.9	chr6	144069575	144069867	(26736112)	C	THE1B	LTR/ERVL-MaLR	(68)	296	1	3520797
731	4.8	0.0	0.0	chr6	144216547	144216629	(26589350)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	3521045
13	18.2	2.6	2.5	chr6	144285043	144285081	(26520898)	+	G-rich	Low_complexity	1	40	(0)	3521175
14	5.0	0.0	0.0	chr6	144285621	144285641	(26520338)	+	(TCTT)n	Simple_repeat	1	21	(0)	3521176
11397	11.5	1.3	0.0	chr6	144863122	144864731	(25941248)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	3521977
1849	14.6	5.1	1.7	chr6	144864739	144865099	(25940880)	+	THE1D	LTR/ERVL-MaLR	8	381	(0)	3521977
2549	11.8	0.0	2.1	chr6	144981580	144981951	(25824028)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3522141
15112	21.1	2.9	2.0	chr6	144981952	144985063	(25820916)	C	L1MA7	LINE/L1	(1661)	5901	2717	3522140
1952	13.4	7.9	0.8	chr6	145002375	145002728	(25803251)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3522166
376	30.3	10.6	3.4	chr6	145463444	145463851	(25342128)	C	L1ME3G	LINE/L1	(185)	739	297	3522815
1204	15.8	4.1	3.7	chr6	145463854	145464096	(25341883)	+	THE1C	LTR/ERVL-MaLR	1	244	(131)	3522816
1811	10.9	8.5	1.3	chr6	145464094	145464399	(25341580)	+	THE1D	LTR/ERVL-MaLR	52	381	(0)	3522817
18	18.9	4.2	0.0	chr6	145814784	145814831	(24991148)	+	(CCCGC)n	Simple_repeat	1	50	(0)	3523214
233	25.1	17.3	3.3	chr6	145880954	145881225	(24924754)	C	Charlie7	DNA/hAT-Charlie	(0)	2612	2295	3523313
1065	14.8	1.1	0.6	chr6	145881232	145881407	(24924572)	C	THE1B	LTR/ERVL-MaLR	(0)	364	188	3523314
15809	22.8	5.2	1.9	chr6	146570267	146573205	(24232774)	+	L1MA3	LINE/L1	1107	3726	(3119)	3524216
13	32.8	0.0	0.0	chr6	147203730	147203779	(23602200)	+	(GCC)n	Simple_repeat	1	50	(0)	3525091
18	23.2	0.0	3.7	chr6	147509159	147509212	(23296767)	+	(GCC)n	Simple_repeat	1	54	(0)	3525503
17	27.2	0.0	2.0	chr6	147812357	147812406	(22993573)	+	(GT)n	Simple_repeat	1	50	(0)	3525935
530	29.4	6.0	5.2	chr6	147812432	147812664	(22993315)	C	MER102b	DNA/hAT-Charlie	(106)	235	1	3525936
2073	14.9	3.5	0.6	chr6	148635590	148635953	(22170026)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3527240
234	31.9	6.4	5.3	chr6	148956037	148956205	(21849774)	+	MIRc	SINE/MIR	20	190	(78)	3527715
2286	11.1	3.7	0.9	chr6	148956241	148956585	(21849394)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3527716
26	29.8	2.3	3.7	chr6	149317406	149317536	(21488443)	+	(GCC)n	Simple_repeat	1	134	(0)	3528245
16	32.6	0.0	0.0	chr6	149317603	149317663	(21488316)	+	G-rich	Low_complexity	1	61	(0)	3528246
56	30.4	1.3	2.6	chr6	149317784	149317804	(21488175)	+	(GCG)n	Simple_repeat	1	27	(203)	3528247
13	20.7	1.8	6.9	chr6	149317805	149317861	(21488118)	+	GA-rich	Low_complexity	1	58	(0)	3528248
56	30.4	1.3	2.6	chr6	149317862	149318010	(21487969)	+	(GCG)n	Simple_repeat	28	230	(0)	3528247
14	5.0	0.0	0.0	chr6	149718040	149718060	(21087919)	+	(GCC)n	Simple_repeat	1	21	(0)	3529015
15	18.4	0.0	7.8	chr6	150143197	150143247	(20662732)	+	(CGG)n	Simple_repeat	1	51	(0)	3529746
14	28.5	2.0	0.0	chr6	150143349	150143399	(20662580)	+	(GCA)n	Simple_repeat	1	52	(0)	3529747
11	26.6	5.6	2.7	chr6	150599796	150599812	(20206167)	+	G-rich	Low_complexity	1	29	(46)	3530476
15	14.9	0.0	0.0	chr6	150599813	150599842	(20206137)	+	(GGGGC)n	Simple_repeat	1	30	(0)	3530477
11	26.6	5.6	2.7	chr6	150599843	150599866	(20206113)	+	G-rich	Low_complexity	30	75	(0)	3530476
29	3.2	0.0	0.0	chr6	150599879	150599910	(20206069)	+	(GAGCCC)n	Simple_repeat	1	32	(0)	3530478
458	34.3	12.0	0.8	chr6	150680169	150680538	(20125441)	C	L2a	LINE/L2	(675)	2744	2328	3530584
356	31.5	8.6	3.6	chr6	150680540	150680904	(20125075)	C	L2a	LINE/L2	(1222)	2197	1813	3530584
15	18.5	0.0	6.1	chr6	150865621	150865669	(19940310)	+	(CCGGCCG)n	Simple_repeat	1	49	(0)	3530872
28	0.0	0.0	0.0	chr6	150865722	150865747	(19940232)	+	(CCG)n	Simple_repeat	1	26	(0)	3530873
14	15.2	0.0	7.1	chr6	150865858	150865899	(19940080)	+	(CCGCCC)n	Simple_repeat	1	42	(0)	3530874
21	24.1	3.2	0.0	chr6	150865917	150865979	(19940000)	+	(GCG)n	Simple_repeat	1	65	(0)	3530875
13	29.8	1.1	6.7	chr6	150866984	150867072	(19938907)	+	(TCCT)n	Simple_repeat	1	90	(0)	3530876
2779	11.8	0.9	3.9	chr6	150911425	150911655	(19894324)	C	MSTA	LTR/ERVL-MaLR	(0)	428	207	3530965
2580	8.5	0.8	0.3	chr6	150911656	150912007	(19893972)	C	THE1A	LTR/ERVL-MaLR	(1)	354	1	3530966
2386	10.6	0.0	0.0	chr6	151381239	151381550	(19424429)	+	AluSx1	SINE/Alu	1	312	(0)	3531888
268	23.6	7.0	5.4	chr6	151381693	151381804	(19424175)	C	Charlie18a	DNA/hAT-Charlie	(1)	341	228	3531889
15	3.5	3.0	5.9	chr6	151390283	151390315	(19415664)	+	(CCGGGG)n	Simple_repeat	1	34	(0)	3531906
17	12.4	2.9	0.0	chr6	151390334	151390368	(19415611)	+	(TCCCCG)n	Simple_repeat	1	36	(0)	3531907
279	28.7	13.4	1.1	chr6	151465341	151465530	(19340449)	C	L2a	LINE/L2	(175)	3251	3035	3532046
453	31.9	12.8	0.4	chr6	151465588	151465839	(19340140)	C	L2a	LINE/L2	(540)	2879	2592	3532046
1483	19.0	2.3	7.7	chr6	151600731	151601016	(19204963)	C	L1MB7	LINE/L1	(21)	6163	5886	3532315
2336	13.5	4.1	2.8	chr6	151601017	151601375	(19204604)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3532316
1483	19.0	2.3	7.7	chr6	151601376	151601453	(19204526)	C	L1MB7	LINE/L1	(299)	5885	5819	3532315
1956	11.0	11.8	4.3	chr6	151602477	151602794	(19203185)	+	THE1D	LTR/ERVL-MaLR	1	344	(37)	3532320
2521	10.2	0.0	0.0	chr6	151602795	151603099	(19202880)	C	AluSq2	SINE/Alu	(7)	306	2	3532321
881	7.6	0.0	0.0	chr6	151735570	151735688	(19070291)	C	L1PB3	LINE/L1	(0)	6154	6036	3532539
12	23.1	0.0	9.1	chr6	151735689	151735732	(19070247)	+	(TTTGTT)n	Simple_repeat	3	42	(0)	3532540
2021	11.6	4.0	2.4	chr6	151735748	151736117	(19069862)	+	THE1D	LTR/ERVL-MaLR	1	376	(5)	3532541
2375	11.0	0.6	3.0	chr6	152076091	152076454	(18729525)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3533021
11476	10.1	1.1	0.8	chr6	152076455	152078028	(18727951)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3533021
25	15.9	3.6	0.0	chr6	152552424	152552479	(18253500)	+	(ATATAT)n	Simple_repeat	1	58	(0)	3533681
522	28.6	3.8	4.7	chr6	152643265	152643477	(18162502)	C	LTR33B	LTR/ERVL	(292)	211	1	3533809
850	32.4	4.0	5.0	chr6	153158401	153158635	(17647344)	C	ERVL-E-int	LTR/ERVL	(1960)	3707	3477	3534528
2211	13.8	2.8	5.6	chr6	153158636	153159010	(17646969)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3534529
850	32.4	4.0	5.0	chr6	153159011	153159255	(17646724)	C	ERVL-E-int	LTR/ERVL	(2191)	3476	3232	3534528
2990	12.3	3.0	3.3	chr6	153906407	153906819	(16899160)	+	L1MA2	LINE/L1	6246	6658	(907)	3535533
2085	11.9	0.8	6.6	chr6	153906820	153907196	(16898783)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3535537
713	23.2	11.9	4.8	chr6	154322904	154323067	(16482912)	+	L1MC5	LINE/L1	8896	9072	(232)	3536156
821	27.1	6.6	16.2	chr6	154323068	154323609	(16482370)	+	LTR16C	LTR/ERVL	4	489	(0)	3536157
648	32.3	8.5	0.6	chr6	154645910	154646233	(16159746)	+	LTR78	LTR/ERV1	346	697	(607)	3536770
251	27.9	10.8	5.1	chr6	154646263	154646408	(16159571)	+	LTR78	LTR/ERV1	777	929	(375)	3536770
2453	11.8	0.0	0.0	chr6	154646409	154646713	(16159266)	+	AluSx1	SINE/Alu	1	305	(7)	3536771
3748	15.5	3.3	2.7	chr6	154651008	154651144	(16154835)	C	L1MA8	LINE/L1	(366)	5925	5788	3536779
2788	9.3	2.8	0.8	chr6	154651145	154651501	(16154478)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3536780
13	18.2	3.5	6.8	chr6	154733522	154733578	(16072401)	+	G-rich	Low_complexity	1	59	(0)	3536959
384	29.8	4.2	3.2	chr6	154860848	154861034	(15944945)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	3537176
11295	10.5	0.4	0.3	chr6	155467581	155469159	(15336820)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3538171
2720	9.0	0.3	0.0	chr6	155469160	155469513	(15336466)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3538171
1691	21.1	2.9	7.2	chr6	155469514	155469656	(15336323)	C	MLT2C2	LTR/ERVL	(317)	147	6	3538170
11114	11.6	1.4	1.2	chr6	156613296	156614922	(14191057)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	3539713
12	8.9	4.2	0.0	chr6	156778583	156778606	(14027373)	+	(CGG)n	Simple_repeat	1	25	(0)	3539997
16	14.9	0.0	0.0	chr6	156778732	156778761	(14027218)	+	(CCG)n	Simple_repeat	1	30	(0)	3539998
47	19.5	0.0	0.0	chr6	156778848	156778941	(14027038)	+	GA-rich	Low_complexity	1	94	(0)	3539999
35	8.0	0.0	1.8	chr6	156778946	156779000	(14026979)	+	(GGC)n	Simple_repeat	1	55	(0)	3540000
18	21.6	0.0	2.0	chr6	156779251	156779300	(14026679)	+	(GCAGCC)n	Simple_repeat	1	50	(0)	3540001
24	7.6	0.0	6.4	chr6	156779297	156779343	(14026636)	+	(GGC)n	Simple_repeat	1	47	(0)	3540002
13	16.8	2.2	6.4	chr6	156779480	156779525	(14026454)	+	(CGCGC)n	Simple_repeat	1	47	(0)	3540003
12	32.1	2.8	1.4	chr6	157021871	157021941	(13784038)	+	(CGTCCCG)n	Simple_repeat	1	73	(0)	3540328
5775	13.3	4.1	2.0	chr6	157749857	157751056	(13054923)	+	L1MB1	LINE/L1	4352	5586	(582)	3541404
2547	8.5	1.1	0.8	chr6	157751057	157751410	(13054569)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3541405
35	14.0	6.7	2.1	chr6	157823035	157823124	(12982855)	+	(CGG)n	Simple_repeat	1	96	(0)	3541541
12	13.7	6.8	4.3	chr6	157823095	157823138	(12982841)	+	(GGCCGAG)n	Simple_repeat	1	47	(0)	3541542
14	21.6	4.7	0.0	chr6	157823308	157823350	(12982629)	+	(GCC)n	Simple_repeat	1	45	(0)	3541543
15	18.8	6.2	5.8	chr6	159169709	159169789	(11636190)	+	(CGCTCCG)n	Simple_repeat	1	86	(0)	3543747
14	5.2	8.9	6.1	chr6	159692948	159692992	(11112987)	+	(GCGTCCCC)n	Simple_repeat	1	49	(0)	3544445
16	27.2	1.9	0.0	chr6	159693167	159693219	(11112760)	+	(TGC)n	Simple_repeat	1	54	(0)	3544446
26	9.9	5.4	1.7	chr6	159693321	159693376	(11112603)	+	(CCGCC)n	Simple_repeat	1	59	(0)	3544447
251	30.5	10.1	3.5	chr6	159895194	159895362	(10910617)	+	MIR3	SINE/MIR	2	187	(21)	3544787
1109	25.9	7.3	2.7	chr6	160446291	160446336	(10359643)	+	MER63D	DNA/hAT-Blackjack	7	50	(1011)	3545447
2084	12.1	7.0	1.1	chr6	160446337	160446687	(10359292)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	3545448
1109	24.7	6.1	1.1	chr6	160446688	160447044	(10358935)	+	MER63D	DNA/hAT-Blackjack	51	435	(1)	3545447
2482	13.1	2.4	0.8	chr6	160520332	160520822	(10285157)	C	LTR12E	LTR/ERV1	(823)	499	1	3545512
2425	12.1	2.2	0.3	chr6	161411163	161411519	(9394460)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3546645
420	21.1	5.3	2.5	chr6	161411585	161412905	(9393074)	+	(ACTC)n	Simple_repeat	1	1391	(0)	3546646
2830	6.8	0.3	0.0	chr6	162069079	162069432	(8736547)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3547630
213	37.5	1.5	7.2	chr6	162507907	162507989	(8297990)	+	MIR3	SINE/MIR	15	90	(118)	3548272
2379	12.2	0.8	3.3	chr6	162507990	162508353	(8297626)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3548273
12	17.7	5.0	2.4	chr6	163413489	163413528	(7392451)	+	(CGCC)n	Simple_repeat	1	42	(0)	3549418
36	5.0	0.0	0.0	chr6	163414675	163414716	(7391263)	+	(GAG)n	Simple_repeat	1	42	(0)	3549419
13	14.7	3.3	0.0	chr6	163414729	163414758	(7391221)	+	(GCG)n	Simple_repeat	1	31	(0)	3549420
20	27.9	1.3	1.3	chr6	163414841	163414930	(7391049)	+	(CGCCCGC)n	Simple_repeat	1	90	(0)	3549421
1444	11.8	2.6	3.5	chr6	164043667	164043895	(6762084)	+	THE1B	LTR/ERVL-MaLR	1	227	(137)	3550254
1211	16.7	0.0	0.0	chr6	164043908	164044075	(6761904)	C	AluJr	SINE/Alu	(25)	287	120	3550255
1331	27.6	3.9	3.3	chr6	164172285	164172774	(6633205)	C	L1ME4b	LINE/L1	(389)	503	11	3550424
383	6.4	0.0	0.0	chr6	164172834	164172880	(6633099)	+	HY4	scRNA	1	47	(46)	3550425
242	33.0	3.5	0.0	chr6	164172982	164173090	(6632889)	C	MIRb	SINE/MIR	(67)	201	89	3550426
1594	15.5	4.3	2.9	chr6	164173099	164173371	(6632608)	C	THE1B	LTR/ERVL-MaLR	(87)	277	1	3550427
4216	20.4	4.2	1.6	chr6	164267174	164268305	(6537674)	+	L1MC2	LINE/L1	5021	6194	(150)	3550547
2230	11.5	6.9	1.4	chr6	164268306	164268649	(6537330)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3550548
534	20.8	0.0	0.0	chr6	165078759	165078864	(5727115)	+	THE1D	LTR/ERVL-MaLR	274	379	(2)	3551523
964	27.2	8.4	3.1	chr6	165078867	165078948	(5727031)	+	L1MC4	LINE/L1	6538	6619	(1423)	3551524
2503	11.6	0.0	1.4	chr6	165078949	165079308	(5726671)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3551525
964	27.2	8.4	3.1	chr6	165079309	165079363	(5726616)	+	L1MC4	LINE/L1	6620	6700	(1342)	3551524
35	0.0	0.0	0.0	chr6	165079364	165079393	(5726586)	+	(GT)n	Simple_repeat	1	30	(0)	3551526
964	27.2	8.4	3.1	chr6	165079394	165079671	(5726308)	+	L1MC4	LINE/L1	6701	6978	(1064)	3551524
15	4.8	0.0	0.0	chr6	165309246	165309267	(5496712)	+	(CCT)n	Simple_repeat	1	22	(0)	3551810
252	25.0	4.2	8.1	chr6	165559631	165559659	(5246320)	+	MLT1E3	LTR/ERVL-MaLR	1	29	(651)	3552089
2208	13.9	0.8	0.6	chr6	165559660	165560013	(5245966)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3552090
252	25.0	4.2	8.1	chr6	165560014	165560057	(5245922)	+	MLT1E3	LTR/ERVL-MaLR	30	71	(609)	3552089
1553	24.6	6.2	3.8	chr6	165560109	165560578	(5245401)	+	MLT1E3	LTR/ERVL-MaLR	141	622	(2)	3552089
12	13.9	0.0	0.0	chr6	165663204	165663227	(5142752)	+	(GGC)n	Simple_repeat	1	24	(0)	3552227
19	12.2	4.2	4.0	chr6	165663262	165663309	(5142670)	+	(CGC)n	Simple_repeat	1	50	(0)	3552228
2514	9.9	0.8	0.8	chr6	166575904	166576258	(4229721)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3553411
11892	8.8	1.3	0.1	chr6	166576259	166577819	(4228160)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3553411
12273	8.5	0.2	0.4	chr6	167752619	167754202	(3051777)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3554735
2663	7.8	2.8	0.0	chr6	167754203	167754547	(3051432)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3554735
642	19.1	1.5	5.2	chr6	167754548	167754580	(3051399)	+	FLAM_A	SINE/Alu	103	131	(11)	3554734
2900	7.0	0.0	0.0	chr6	167792697	167793051	(3012928)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3554793
1663	20.9	3.0	1.7	chr6	167793052	167793161	(3012818)	C	Tigger4b	DNA/TcMar-Tigger	(251)	110	1	3554792
614	9.0	9.2	26.1	chr6	167850898	167851085	(2954894)	C	AluSx1	SINE/Alu	(29)	283	131	3554874
2172	12.1	7.1	1.5	chr6	169108208	169108550	(1697429)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3556143
2288	10.3	0.0	0.0	chr6	169108551	169108862	(1697117)	+	THE1B-int	LTR/ERVL-MaLR	1	312	(1268)	3556143
2515	10.8	0.8	0.0	chr6	169146431	169146781	(1659198)	+	THE1A	LTR/ERVL-MaLR	1	354	(1)	3556171
2803	6.2	0.6	0.3	chr6	169311741	169312094	(1493885)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3556338
693	26.6	13.5	0.7	chr6	169432057	169432363	(1373616)	+	MER34	LTR/ERV1	34	380	(162)	3556445
1978	15.7	5.2	3.4	chr6	169432386	169432742	(1373237)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3556446
1756	7.2	0.4	16.1	chr6	169432743	169433072	(1372907)	+	THE1B-int	LTR/ERVL-MaLR	1	278	(1302)	3556446
10578	12.4	5.7	0.3	chr6	170004121	170005661	(800318)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	3557057
2386	10.0	0.3	0.0	chr7	809646	809955	(158536018)	+	AluSq2	SINE/Alu	2	312	(1)	3558937
1826	14.2	5.0	12.0	chr7	809956	810119	(158535854)	+	THE1D	LTR/ERVL-MaLR	165	324	(57)	3558935
2293	7.8	0.0	0.0	chr7	810120	810401	(158535572)	+	AluY	SINE/Alu	1	282	(29)	3558938
1966	14.5	0.0	2.3	chr7	1183262	1183571	(158162402)	C	AluJo	SINE/Alu	(5)	307	5	3559446
2385	8.0	0.3	0.0	chr7	1183824	1184122	(158161851)	C	AluSz6	SINE/Alu	(11)	301	2	3559447
14	24.7	0.0	0.0	chr7	1235974	1236011	(158109962)	+	GA-rich	Low_complexity	1	38	(0)	3559562
20	14.6	2.0	4.0	chr7	1236403	1236451	(158109522)	+	(CGC)n	Simple_repeat	1	50	(0)	3559563
1348	25.4	9.1	2.2	chr7	1520244	1520693	(157825280)	+	MLT2B3	LTR/ERVL	59	554	(0)	3560018
506	32.3	3.4	0.5	chr7	1520722	1520923	(157825050)	C	MLT1G3	LTR/ERVL-MaLR	(387)	208	1	3560021
2169	14.0	3.0	5.7	chr7	1521127	1521167	(157824806)	C	THE1B	LTR/ERVL-MaLR	(0)	364	325	3560022
2475	8.4	0.0	0.0	chr7	1521168	1521466	(157824507)	+	AluSz	SINE/Alu	1	299	(13)	3560023
305	32.2	6.1	5.2	chr7	3922556	3923177	(155422796)	C	L1MEj	LINE/L1	(4806)	1690	937	3564017
13	26.3	1.2	8.1	chr7	5190335	5190419	(154155554)	+	(GGCCC)n	Simple_repeat	1	86	(0)	3566484
19	21.8	1.8	1.8	chr7	5190498	5190553	(154155420)	+	(GGTCGG)n	Simple_repeat	1	57	(0)	3566485
12	27.4	0.0	2.2	chr7	5421390	5421435	(153924538)	+	(GCGCCCG)n	Simple_repeat	1	46	(0)	3566994
233	22.5	8.5	6.6	chr7	6348316	6348418	(152997555)	+	MIRc	SINE/MIR	57	169	(99)	3569141
13	7.6	8.5	5.9	chr7	6348517	6348563	(152997410)	+	G-rich	Low_complexity	1	51	(0)	3569142
12	18.4	5.4	0.0	chr7	6348780	6348816	(152997157)	+	(GCCGC)n	Simple_repeat	1	39	(0)	3569143
179	0.0	3.4	0.0	chr7	6577112	6577287	(152768686)	+	(ATAAA)n	Simple_repeat	1	182	(0)	3569724
2179	9.6	1.3	0.3	chr7	6577829	6578129	(152767844)	C	AluSq	SINE/Alu	(9)	304	1	3569725
1803	15.0	0.7	0.7	chr7	6578130	6578416	(152767557)	C	AluJr	SINE/Alu	(14)	298	12	3569726
17	13.3	7.1	0.0	chr7	6590130	6590171	(152755802)	+	(GCAG)n	Simple_repeat	1	45	(0)	3569752
1519	7.5	4.2	0.8	chr7	6590230	6590483	(152755490)	+	Charlie17b	DNA/hAT-Charlie	158	420	(784)	3569753
2511	9.9	3.1	0.0	chr7	7154662	7155005	(152190968)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3570719
15	12.0	0.0	0.0	chr7	7155038	7155064	(152190909)	+	(ATTA)n	Simple_repeat	1	27	(0)	3570720
12	15.3	3.5	0.0	chr7	7155064	7155092	(152190881)	+	(TCCA)n	Simple_repeat	1	30	(0)	3570721
1091	22.2	13.2	3.4	chr7	7155152	7155292	(152190681)	C	L1M8	LINE/L1	(650)	1705	1558	3570722
13	26.3	1.6	4.6	chr7	7968727	7968790	(151377183)	+	G-rich	Low_complexity	1	65	(0)	3571872
19	12.1	2.8	0.0	chr7	7968827	7968862	(151377111)	+	(GCG)n	Simple_repeat	1	37	(0)	3571873
309	30.2	10.4	6.4	chr7	7969024	7969225	(151376748)	C	L1M4b	LINE/L1	(6249)	618	408	3571874
17	22.7	2.2	0.0	chr7	7969361	7969406	(151376567)	+	(CCT)n	Simple_repeat	1	47	(0)	3571875
12	16.9	2.9	2.8	chr7	7969428	7969462	(151376511)	+	(CGC)n	Simple_repeat	1	36	(0)	3571876
23	24.4	3.8	1.2	chr7	7970357	7970436	(151375537)	+	(TCCCTC)n	Simple_repeat	1	83	(0)	3571877
12	16.0	0.0	3.3	chr7	8262052	8262081	(151083892)	+	(CCCGC)n	Simple_repeat	1	30	(0)	3572279
2693	9.3	0.0	0.0	chr7	9554439	9554793	(149791180)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3573849
1454	22.6	1.2	4.6	chr7	9554794	9554832	(149791141)	+	MER1B	DNA/hAT-Charlie	309	336	(3)	3573848
1323	31.4	4.6	1.4	chr7	9554833	9555339	(149790634)	C	L2a	LINE/L2	(888)	2531	2008	3573846
28	12.4	0.0	0.0	chr7	11831828	11831880	(147514093)	+	(AGC)n	Simple_repeat	1	53	(0)	3576680
20	27.5	0.0	0.0	chr7	11832113	11832184	(147513789)	+	(GCC)n	Simple_repeat	1	72	(0)	3576681
2362	11.5	1.1	0.6	chr7	12517061	12517411	(146828562)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	3577450
9480	23.7	4.3	9.3	chr7	12517412	12520310	(146825663)	C	L1MA4A	LINE/L1	(4621)	2945	358	3577443
10033	12.2	3.4	0.8	chr7	14775832	14777370	(144568603)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3580403
2501	8.8	0.6	1.1	chr7	15858294	15858650	(143487323)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3581794
13	19.4	0.0	2.7	chr7	19116547	19116583	(140229390)	+	G-rich	Low_complexity	1	37	(0)	3586147
31	6.7	2.0	2.0	chr7	19117029	19117078	(140228895)	+	(CCG)n	Simple_repeat	1	51	(0)	3586148
23	24.8	5.1	4.0	chr7	19117129	19117246	(140228727)	+	(CGC)n	Simple_repeat	1	124	(0)	3586149
2130	9.8	4.8	1.4	chr7	21129941	21130301	(138215672)	C	THE1D	LTR/ERVL-MaLR	(0)	381	8	3588757
2887	13.9	1.6	4.9	chr7	21401641	21401934	(137944039)	+	L1MB7	LINE/L1	5324	5618	(566)	3589201
2369	9.3	6.2	0.9	chr7	21401935	21402270	(137943703)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3589207
2887	13.9	1.6	4.9	chr7	21402271	21402375	(137943598)	+	L1MB7	LINE/L1	5619	5718	(466)	3589201
5094	11.3	2.3	1.0	chr7	21402376	21403057	(137942916)	C	LTR8	LTR/ERV1	(0)	691	1	3589208
12	18.7	5.8	3.6	chr7	23013694	23013745	(136332228)	+	(CGCCGGC)n	Simple_repeat	1	55	(0)	3591567
1557	22.2	7.3	7.6	chr7	23596916	23597039	(135748934)	C	L1ME3B	LINE/L1	(1911)	4235	4108	3592684
1580	25.0	3.1	9.1	chr7	24526780	24527512	(134818461)	+	L1MD2	LINE/L1	5195	5848	(684)	3594018
2730	8.4	0.0	0.3	chr7	24527513	24527868	(134818105)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3594021
31	10.1	2.9	4.2	chr7	24573277	24573297	(134772676)	+	(GCG)n	Simple_repeat	1	20	(0)	3594106
38	0.0	0.0	0.0	chr7	24573298	24573332	(134772641)	+	(GGA)n	Simple_repeat	1	35	(0)	3594107
31	10.1	2.9	4.2	chr7	24573333	24573380	(134772593)	+	(GCG)n	Simple_repeat	3	50	(0)	3594108
16	10.0	4.0	7.7	chr7	24573401	24573450	(134772523)	+	G-rich	Low_complexity	1	52	(0)	3594109
25	20.8	1.3	5.0	chr7	24573501	24573579	(134772394)	+	(CGG)n	Simple_repeat	1	80	(0)	3594110
13	18.7	6.9	3.2	chr7	24573632	24573689	(134772284)	+	(CGCGCCG)n	Simple_repeat	1	62	(0)	3594111
18	21.5	4.3	4.1	chr7	24573730	24573799	(134772174)	+	(CGG)n	Simple_repeat	1	73	(0)	3594112
47	0.0	0.0	0.0	chr7	25856999	25857038	(133488935)	+	(AC)n	Simple_repeat	1	40	(0)	3596026
14	9.1	0.0	0.0	chr7	25857039	25857062	(133488911)	+	(GCAC)n	Simple_repeat	1	24	(0)	3596027
387	19.9	7.8	9.6	chr7	26162347	26162502	(133183471)	+	L1MC5a	LINE/L1	2624	2776	(1)	3596541
1987	11.8	0.7	0.4	chr7	26162712	26162990	(133182983)	C	AluJb	SINE/Alu	(11)	301	22	3596542
321	28.9	1.1	1.1	chr7	27125257	27125347	(132220626)	+	MIR3	SINE/MIR	118	208	(0)	3598039
31	5.5	0.0	0.0	chr7	27169594	27169631	(132176342)	+	(CCG)n	Simple_repeat	1	38	(0)	3598076
14	13.4	4.3	6.1	chr7	27169773	27169819	(132176154)	+	G-rich	Low_complexity	1	49	(0)	3598077
14	24.9	2.0	8.7	chr7	27169977	27170077	(132175896)	+	(GCCCCC)n	Simple_repeat	1	103	(0)	3598078
37	29.7	0.7	2.2	chr7	27184482	27184636	(132161337)	+	(CGC)n	Simple_repeat	1	152	(0)	3598093
17	8.2	0.0	0.0	chr7	27199463	27199488	(132146485)	+	(GGC)n	Simple_repeat	1	26	(0)	3598102
52	23.8	1.4	1.4	chr7	27199827	27199967	(132146006)	+	(GCC)n	Simple_repeat	1	143	(0)	3598103
20	19.6	3.3	1.6	chr7	27200141	27200200	(132145773)	+	G-rich	Low_complexity	1	62	(0)	3598104
417	29.2	6.7	2.3	chr7	27955826	27955997	(131389976)	+	MER103C	DNA/hAT-Charlie	110	289	(8)	3599284
29	21.3	1.0	6.0	chr7	28179714	28179812	(131166161)	+	(CCCCGG)n	Simple_repeat	1	100	(0)	3599622
13	0.0	0.0	0.0	chr7	28179858	28179874	(131166099)	+	(GGC)n	Simple_repeat	1	17	(0)	3599623
13	24.6	5.1	1.6	chr7	29685300	29685358	(129660615)	+	(GGCGCCC)n	Simple_repeat	1	62	(0)	3601964
13	24.3	4.9	5.8	chr7	29685532	29685613	(129660360)	+	(GCC)n	Simple_repeat	1	86	(0)	3601965
11	15.1	2.4	7.0	chr7	29806872	29806913	(129539060)	+	(CGCCCC)n	Simple_repeat	1	43	(0)	3602148
18	4.0	0.0	0.0	chr7	29806907	29806932	(129539041)	+	(CCGGG)n	Simple_repeat	1	26	(0)	3602149
12	12.7	8.5	3.9	chr7	30284482	30284528	(129061445)	+	(GGCGGA)n	Simple_repeat	1	51	(0)	3602921
12	32.3	2.4	3.6	chr7	30284934	30285015	(129060958)	+	(GGC)n	Simple_repeat	1	84	(0)	3602922
19	26.7	3.1	0.0	chr7	30285537	30285600	(129060373)	+	(CGC)n	Simple_repeat	1	66	(0)	3602923
697	26.7	12.1	7.1	chr7	31155187	31155447	(128190526)	+	L1MEd	LINE/L1	2127	2389	(3757)	3604224
2580	9.4	1.4	0.0	chr7	31155448	31155797	(128190176)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3604225
697	26.7	12.1	7.1	chr7	31155798	31156369	(128189604)	+	L1MEd	LINE/L1	2390	3008	(3138)	3604224
10210	18.7	4.0	5.2	chr7	31225087	31226168	(128119805)	C	L1MA4A	LINE/L1	(4195)	3371	2274	3604319
2629	9.6	0.3	0.0	chr7	31226169	31226522	(128119451)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3604321
11643	9.0	0.5	0.5	chr7	31226523	31228102	(128117871)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3604321
2644	9.4	0.8	0.0	chr7	31228105	31228454	(128117519)	+	THE1A	LTR/ERVL-MaLR	3	355	(0)	3604322
10210	18.7	4.0	5.2	chr7	31228455	31229345	(128116628)	C	L1MA4A	LINE/L1	(5293)	2273	1432	3604319
623	18.5	19.3	3.9	chr7	31352349	31352401	(127993572)	C	ORSL	DNA/hAT-Tip100	(0)	275	227	3604527
2046	13.9	6.1	1.1	chr7	31352402	31352757	(127993216)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3604528
623	18.5	19.3	3.9	chr7	31352758	31352934	(127993039)	C	ORSL	DNA/hAT-Tip100	(49)	226	1	3604527
11743	9.1	0.9	0.3	chr7	32521164	32522729	(126823244)	+	THE1A-int	LTR/ERVL-MaLR	1	1577	(3)	3606367
2664	7.7	1.4	0.6	chr7	32522730	32523081	(126822892)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3606367
10078	9.2	10.5	5.6	chr7	32523082	32523508	(126822465)	+	MER4B-int	LTR/ERV1	4045	4567	(2191)	3606362
10717	11.7	3.4	1.6	chr7	32801805	32803405	(126542568)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	3606797
14	21.7	4.0	1.9	chr7	32942604	32942653	(126403320)	+	(GCCGCG)n	Simple_repeat	1	52	(0)	3607043
12	16.8	0.0	10.2	chr7	32943209	32943257	(126402716)	+	G-rich	Low_complexity	1	49	(0)	3607044
16	20.8	0.0	0.0	chr7	33905439	33905471	(125440502)	+	(C)n	Simple_repeat	1	33	(0)	3608572
15	30.3	1.5	1.5	chr7	33905472	33905499	(125440474)	+	(TCCC)n	Simple_repeat	6	67	(0)	3608573
17	26.0	0.0	5.6	chr7	35037448	35037518	(124308455)	+	(GGCG)n	Simple_repeat	1	71	(0)	3610093
20	30.8	3.2	1.0	chr7	35801370	35801462	(123544511)	+	(GGC)n	Simple_repeat	1	96	(0)	3611239
17	33.0	0.0	3.6	chr7	35801781	35801864	(123544109)	+	(GGC)n	Simple_repeat	1	84	(0)	3611240
18	15.8	8.6	1.6	chr7	36153193	36153250	(123192723)	+	(GCG)n	Simple_repeat	1	63	(0)	3611822
18	29.2	1.5	1.4	chr7	36153375	36153442	(123192531)	+	(CGC)n	Simple_repeat	1	69	(0)	3611823
1383	17.8	3.0	3.6	chr7	38089241	38089521	(121256452)	+	L1M4	LINE/L1	4901	5185	(961)	3614630
2667	8.8	0.3	1.4	chr7	38089522	38089880	(121256093)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3614631
1383	17.8	3.0	3.6	chr7	38089881	38089902	(121256071)	+	L1M4	LINE/L1	5186	5202	(944)	3614630
916	23.3	2.9	4.7	chr7	38089924	38090243	(121255730)	C	L1M4	LINE/L1	(2233)	3913	3600	3614628
267	29.7	0.0	0.2	chr7	38311187	38311251	(121034722)	+	MIRb	SINE/MIR	16	86	(182)	3614930
38	2.6	0.0	0.0	chr7	39623633	39623671	(119722302)	+	(TCC)n	Simple_repeat	1	39	(0)	3616827
25	17.8	0.0	0.0	chr7	39624281	39624325	(119721648)	+	(T)n	Simple_repeat	1	45	(0)	3616828
1953	14.3	4.1	4.6	chr7	39660894	39661259	(119684714)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3616903
10950	9.7	1.9	2.8	chr7	39661260	39662852	(119683121)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	3	3616903
1722	16.5	9.9	0.3	chr7	39662855	39663183	(119682790)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3616903
6873	17.8	5.0	4.3	chr7	39663184	39664812	(119681161)	+	Tigger2	DNA/TcMar-Tigger	279	1918	(800)	3616904
2244	8.6	0.3	2.3	chr7	39903290	39903591	(119442382)	+	AluSz	SINE/Alu	6	301	(11)	3617381
10989	15.2	5.1	6.5	chr7	39903592	39903727	(119442246)	+	L1MCa	LINE/L1	457	592	(5916)	3617380
2469	6.4	7.0	0.0	chr7	39903728	39904057	(119441916)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3617382
10989	15.2	5.1	6.5	chr7	39904058	39904637	(119441336)	+	L1MCa	LINE/L1	593	1147	(5361)	3617380
329	16.7	0.0	0.0	chr7	39942240	39942287	(119403686)	C	Alu	SINE/Alu	(85)	48	1	3617468
2559	11.1	0.6	0.0	chr7	39942459	39942811	(119403162)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3617469
247	34.3	5.3	0.0	chr7	39942877	39942984	(119402989)	+	MIRc	SINE/MIR	78	191	(77)	3617470
38	31.7	0.0	0.8	chr7	39950746	39950875	(119395098)	+	(GCC)n	Simple_repeat	1	130	(0)	3617487
13	18.3	2.6	2.5	chr7	39950917	39950955	(119395018)	+	(GGCGAGA)n	Simple_repeat	1	40	(0)	3617488
14	27.0	4.3	2.7	chr7	39951108	39951177	(119394796)	+	(GGC)n	Simple_repeat	1	73	(0)	3617489
22	26.8	1.4	1.4	chr7	39951383	39951455	(119394518)	+	(AGC)n	Simple_repeat	1	74	(0)	3617490
37	19.7	1.4	8.3	chr7	43582939	43583085	(115762888)	+	G-rich	Low_complexity	1	136	(0)	3622832
415	29.6	0.6	9.1	chr7	43838757	43838931	(115507042)	C	TAR1	Satellite/telo	(181)	1930	1771	3623257
232	31.4	11.6	2.1	chr7	43926843	43926982	(115418991)	C	L2c	LINE/L2	(202)	3185	3031	3623463
44	27.5	3.3	4.1	chr7	44325726	44325936	(115020037)	+	(CACCTG)n	Simple_repeat	1	218	(0)	3624064
13	20.3	4.3	2.0	chr7	44884997	44885043	(114460930)	+	(CGCCCGC)n	Simple_repeat	1	49	(0)	3625084
50	22.4	4.0	6.6	chr7	44885267	44885513	(114460460)	+	(CGC)n	Simple_repeat	1	257	(0)	3625085
261	29.8	5.0	1.1	chr7	45112115	45112209	(114233764)	C	Charlie8	DNA/hAT-Charlie	(2303)	125	27	3625496
2183	13.4	1.1	0.8	chr7	46677720	46678073	(112667900)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3627529
249	32.1	7.9	2.8	chr7	47375092	47375237	(111970736)	C	MIR1_Amn	SINE/MIR	(27)	181	30	3628445
2481	12.4	0.3	0.0	chr7	47795166	47795519	(111550454)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3629091
5739	10.9	1.1	1.0	chr7	54933085	54933175	(104412798)	+	L1MA3	LINE/L1	7464	7557	(167)	3637987
12	27.4	1.8	3.5	chr7	54933238	54933293	(104412680)	+	G-rich	Low_complexity	1	57	(0)	3637989
12	12.8	5.6	2.6	chr7	54933402	54933437	(104412536)	+	(GAGGCG)n	Simple_repeat	1	38	(0)	3637990
13	16.3	2.8	2.7	chr7	55365947	55365982	(103979991)	+	(CGG)n	Simple_repeat	1	37	(0)	3638526
856	22.8	5.2	3.8	chr7	55821654	55821831	(103524142)	C	L1M3	LINE/L1	(413)	5770	5589	3639276
2722	8.5	0.3	0.3	chr7	55821832	55822184	(103523789)	C	THE1A	LTR/ERVL-MaLR	(0)	355	3	3639277
2036	13.5	7.2	1.7	chr7	55946554	55946907	(103399066)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3639557
367	17.7	3.1	0.0	chr7	57495408	57495469	(101850504)	+	AluYj4	SINE/Alu	226	289	(22)	3642546
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
883	22.3	0.9	2.8	chr7	63141103	63141289	(96204684)	C	L1M3	LINE/L1	(413)	5770	5584	3644120
2504	10.8	0.6	0.3	chr7	63141290	63141643	(96204330)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3644121
883	22.3	0.9	2.8	chr7	63141644	63141672	(96204301)	C	L1M3	LINE/L1	(600)	5583	5558	3644120
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
383	14.3	3.1	0.0	chr7	65489887	65489949	(93856024)	C	AluYj4	SINE/Alu	(22)	289	225	3647903
85	11.3	0.7	0.6	chr7	65489965	65490119	(93855854)	+	(TTCCA)n	Simple_repeat	1	156	(0)	3647904
13	20.4	0.0	2.8	chr7	65509965	65510000	(93835973)	+	(GCG)n	Simple_repeat	1	36	(0)	3647931
6736	20.6	4.9	4.6	chr7	67063901	67064438	(92281535)	+	L1MD	LINE/L1	4332	4877	(1269)	3651438
2702	6.9	2.3	0.0	chr7	67064439	67064785	(92281188)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3651440
6736	20.6	4.9	4.6	chr7	67064786	67064962	(92281011)	+	L1MD	LINE/L1	4878	5012	(1134)	3651438
1972	16.9	3.3	1.1	chr7	68159493	68159852	(91186121)	C	THE1C	LTR/ERVL-MaLR	(5)	370	3	3653868
17	9.1	0.0	0.0	chr7	68901554	68901577	(90444396)	+	(AC)n	Simple_repeat	1	24	(0)	3655492
20	7.9	0.0	0.0	chr7	68901598	68901624	(90444349)	+	(A)n	Simple_repeat	1	27	(0)	3655493
2351	12.2	0.8	0.8	chr7	68901706	68902060	(90443913)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3655494
10522	7.8	9.6	0.3	chr7	68902061	68903492	(90442481)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3655494
2170	12.1	12.4	4.4	chr7	69544062	69544408	(89801565)	+	MSTA	LTR/ERVL-MaLR	1	398	(30)	3656937
2184	7.4	0.7	1.4	chr7	69544409	69544716	(89801257)	C	AluY	SINE/Alu	(0)	311	1	3656938
31	2.2	4.0	3.9	chr7	69598310	69598359	(89747614)	+	(CGAG)n	Simple_repeat	1	52	(0)	3657061
12	21.7	0.0	2.9	chr7	69598809	69598843	(89747130)	+	(TCTCC)n	Simple_repeat	1	35	(0)	3657062
25	18.1	1.1	7.9	chr7	70693944	70694031	(88651942)	+	G-rich	Low_complexity	1	89	(0)	3658701
15	17.6	7.5	1.8	chr7	70694296	70694348	(88651625)	+	(CGC)n	Simple_repeat	1	57	(0)	3658702
18	6.6	0.0	7.9	chr7	70694494	70694531	(88651442)	+	(CCT)n	Simple_repeat	1	38	(0)	3658703
2048	10.7	4.5	11.2	chr7	71242987	71243396	(88102577)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3659795
94	6.0	1.3	4.5	chr7	71847710	71847863	(87498110)	+	(AAG)n	Simple_repeat	1	156	(0)	3661074
804	9.2	7.1	2.0	chr7	71847867	71848014	(87497959)	+	THE1B	LTR/ERVL-MaLR	177	324	(40)	3661071
554	19.2	3.0	0.9	chr7	71847983	71848114	(87497859)	C	MLT2B4	LTR/ERVL	(255)	142	1	3661067
2053	13.3	7.1	3.4	chr7	72119143	72119492	(87226481)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3661651
2483	11.4	2.8	1.7	chr7	72119554	72119911	(87226062)	C	THE1B	LTR/ERVL-MaLR	(0)	364	3	3661652
2709	10.2	0.3	0.3	chr7	72432038	72432401	(86913572)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3662302
912	25.9	10.2	8.2	chr7	72432402	72432736	(86913237)	+	L4_A_Mam	LINE/RTE-X	4637	4987	(3)	3662281
7057	19.8	6.0	4.2	chr7	72746926	72747102	(86598871)	C	L1MDb	LINE/L1	(1134)	5403	5274	3662981
2662	7.5	2.0	0.0	chr7	72747103	72747450	(86598523)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3662982
7057	19.8	6.0	4.2	chr7	72747451	72747989	(86597984)	C	L1MDb	LINE/L1	(1264)	5273	4723	3662981
686	28.5	4.7	7.3	chr7	73978532	73978902	(85367071)	C	Tigger20a	DNA/TcMar-Tigger	(111)	862	502	3665911
224	24.2	4.4	1.0	chr7	76280745	76281432	(83064541)	+	(CT)n	Simple_repeat	1	718	(0)	3671774
32	22.8	1.8	5.2	chr7	76281556	76281669	(83064304)	+	(GCG)n	Simple_repeat	1	116	(0)	3671775
16	19.3	0.0	4.4	chr7	77536973	77537017	(81808956)	+	G-rich	Low_complexity	1	45	(0)	3673969
27	0.0	0.0	0.0	chr7	77537106	77537131	(81808842)	+	(GCGGCT)n	Simple_repeat	1	26	(0)	3673970
13	23.8	0.0	2.1	chr7	77537132	77537169	(81808804)	+	G-rich	Low_complexity	8	45	(0)	3673971
34	0.0	0.0	0.0	chr7	77537204	77537234	(81808739)	+	(GGC)n	Simple_repeat	1	31	(0)	3673972
12	13.7	0.0	0.0	chr7	77537368	77537391	(81808582)	+	(GCC)n	Simple_repeat	1	24	(0)	3673973
517	31.9	11.0	9.5	chr7	78338276	78338632	(81007341)	+	L2c	LINE/L2	3024	3386	(1)	3675312
18	13.5	0.0	0.0	chr7	79453600	79453632	(79892341)	+	(GGC)n	Simple_repeat	1	33	(0)	3676790
11746	9.3	0.3	0.2	chr7	79669522	79671091	(79674882)	+	THE1B-int	LTR/ERVL-MaLR	1	1572	(8)	3677102
1919	17.1	3.7	2.6	chr7	79671114	79671460	(79674513)	+	THE1B	LTR/ERVL-MaLR	14	364	(0)	3677102
35	0.0	2.8	0.0	chr7	80919560	80919595	(78426378)	+	(TTTTGTT)n	Simple_repeat	1	37	(0)	3678794
1867	8.7	9.1	1.9	chr7	80919597	80919860	(78426113)	C	AluSc	SINE/Alu	(24)	285	1	3678795
1779	14.5	6.2	1.6	chr7	82536365	82536686	(76809287)	+	THE1C	LTR/ERVL-MaLR	1	338	(37)	3681060
1307	14.1	2.9	3.3	chr7	82536688	82536891	(76809082)	+	THE1D	LTR/ERVL-MaLR	139	347	(34)	3681061
1932	18.2	12.2	1.2	chr7	82719110	82719515	(76626458)	+	LTR32	LTR/ERVL	1	457	(0)	3681306
372	24.7	8.0	9.6	chr7	82719516	82719545	(76626428)	C	MER21A	LTR/ERVL	(714)	217	184	3681305
325	24.4	3.7	0.0	chr7	82719520	82719597	(76626376)	C	MER39	LTR/ERV1	(416)	291	211	3681304
2678	8.7	0.0	1.4	chr7	82719598	82719957	(76626016)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3681307
1821	17.5	12.9	1.9	chr7	83183733	83184111	(76161862)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	3681925
2748	7.9	0.3	0.0	chr7	84416100	84416453	(74929520)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3683522
2322	9.2	7.9	0.0	chr7	87244635	87244961	(72101012)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3686980
11273	9.9	1.9	0.3	chr7	87244964	87246515	(72099458)	+	THE1A-int	LTR/ERVL-MaLR	3	1580	(0)	3686980
2666	7.7	0.6	2.8	chr7	87246516	87246813	(72099160)	+	THE1A	LTR/ERVL-MaLR	1	298	(57)	3686980
2537	5.6	0.0	0.0	chr7	87246814	87247100	(72098873)	C	AluYc	SINE/Alu	(12)	287	1	3686981
19	28.2	1.6	7.2	chr7	87876335	87876457	(71469516)	+	G-rich	Low_complexity	1	125	(0)	3687771
18	0.0	0.0	0.0	chr7	87934661	87934680	(71411293)	+	(T)n	Simple_repeat	1	20	(0)	3687846
11252	10.2	1.7	0.5	chr7	88525588	88527147	(70818826)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3688680
2538	11.1	0.3	0.0	chr7	88527148	88527499	(70818474)	C	THE1A	LTR/ERVL-MaLR	(0)	355	3	3688680
20	10.9	7.8	1.8	chr7	90596343	90596393	(68749580)	+	(GGC)n	Simple_repeat	1	55	(0)	3691355
13	9.8	0.0	0.0	chr7	90596516	90596537	(68749436)	+	(GAG)n	Simple_repeat	1	22	(0)	3691356
18	22.7	0.0	0.0	chr7	91264494	91264539	(68081434)	+	(GGAGGC)n	Simple_repeat	1	46	(0)	3692227
12	5.5	0.0	0.0	chr7	91264708	91264726	(68081247)	+	(GCG)n	Simple_repeat	1	19	(0)	3692228
18	16.2	2.3	2.3	chr7	91265042	91265084	(68080889)	+	(GCT)n	Simple_repeat	1	44	(0)	3692229
21	17.9	0.0	3.7	chr7	91265086	91265139	(68080834)	+	G-rich	Low_complexity	1	54	(0)	3692230
2190	8.9	1.1	0.7	chr7	92590620	92590931	(66755042)	C	AluSx1	SINE/Alu	(0)	312	1	3694135
434	26.4	5.7	3.0	chr7	93430861	93431103	(65914870)	+	LTR81AB	LTR/Gypsy	127	377	(973)	3695216
1601	22.3	10.5	1.3	chr7	93680520	93680977	(65664996)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3695565
3740	7.3	1.5	1.5	chr7	93768675	93768948	(65577025)	+	L1MA1	LINE/L1	4864	5142	(1004)	3695699
2507	10.3	1.7	0.6	chr7	93768949	93769299	(65576674)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3695700
6794	9.1	2.7	0.6	chr7	93769300	93770429	(65575544)	+	L1MA1	LINE/L1	5143	6296	(6)	3695699
2396	16.6	3.2	3.6	chr7	96237995	96238463	(63107510)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	3699060
22	3.9	0.0	0.0	chr7	97005841	97005867	(62340106)	+	(T)n	Simple_repeat	1	27	(0)	3700153
51	5.4	0.0	0.0	chr7	97006052	97006110	(62339863)	+	(GCA)n	Simple_repeat	1	59	(0)	3700154
25	3.1	0.0	0.0	chr7	97006111	97006143	(62339830)	+	(CGC)n	Simple_repeat	1	33	(0)	3700155
16	4.3	0.0	3.9	chr7	97006204	97006229	(62339744)	+	(CGG)n	Simple_repeat	1	26	(0)	3700156
31	3.1	0.0	0.0	chr7	97006233	97006265	(62339708)	+	(CAC)n	Simple_repeat	1	33	(0)	3700157
13	29.4	0.0	0.0	chr7	100435798	100435843	(58910130)	+	(GCCCGCC)n	Simple_repeat	1	46	(0)	3706569
19	21.9	7.3	4.2	chr7	100436191	100436300	(58909673)	+	G-rich	Low_complexity	1	118	(0)	3706570
16	32.5	2.3	2.2	chr7	100539380	100539466	(58806507)	+	(GGC)n	Simple_repeat	1	89	(0)	3706844
15	18.5	4.7	0.0	chr7	100626715	100626757	(58719216)	+	G-rich	Low_complexity	1	45	(0)	3706987
12	17.8	7.9	4.4	chr7	100626885	100626947	(58719026)	+	G-rich	Low_complexity	1	68	(0)	3706988
15	12.8	2.0	7.8	chr7	100627014	100627063	(58718910)	+	(GCAGGAG)n	Simple_repeat	1	51	(0)	3706989
16	15.9	0.0	0.0	chr7	101814087	101814114	(57531859)	+	(C)n	Simple_repeat	1	28	(0)	3709741
2129	11.2	0.3	1.6	chr7	101855909	101856211	(57489762)	+	AluJo	SINE/Alu	13	311	(1)	3709816
20838	8.0	1.5	5.3	chr7	102901269	102905914	(56440059)	C	L1MA1	LINE/L1	(0)	7721	3268	3711922
2424	7.1	8.2	0.0	chr7	102905915	102906240	(56439733)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3711923
616	27.6	6.4	7.5	chr7	103197432	103197670	(56148303)	C	L2a	LINE/L2	(4)	3422	3187	3712352
1378	15.6	0.4	5.1	chr7	103197733	103197969	(56148004)	+	Tigger4a	DNA/TcMar-Tigger	11	236	(0)	3712353
2267	11.7	1.1	1.1	chr7	103556478	103556832	(55789141)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3712902
28	0.0	0.0	3.2	chr7	103989357	103989387	(55356586)	+	(GCC)n	Simple_repeat	1	31	(0)	3713457
12	23.3	2.5	0.0	chr7	103989467	103989506	(55356467)	+	G-rich	Low_complexity	1	41	(0)	3713458
13	13.9	4.7	4.4	chr7	103989554	103989596	(55356377)	+	G-rich	Low_complexity	1	45	(0)	3713458
15	18.8	2.2	4.3	chr7	103989605	103989650	(55356323)	+	(GCC)n	Simple_repeat	1	47	(0)	3713459
22	11.3	0.0	0.0	chr7	105521796	105521833	(53824140)	+	(CGGGGAG)n	Simple_repeat	1	38	(0)	3716040
18	16.4	0.0	2.7	chr7	105521971	105522021	(53823952)	+	G-rich	Low_complexity	1	49	(0)	3716041
1847	12.1	0.0	3.3	chr7	105580938	105581210	(53764763)	+	AluSq2	SINE/Alu	1	264	(49)	3716177
2870	6.8	0.0	2.5	chr7	105882211	105882508	(53463465)	+	THE1A	LTR/ERVL-MaLR	1	296	(59)	3716739
2319	11.3	0.0	0.0	chr7	105882509	105882809	(53463164)	C	AluSx1	SINE/Alu	(11)	301	1	3716740
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
373	30.9	3.3	4.9	chr7	106517395	106517460	(52828513)	+	Tigger16a	DNA/TcMar-Tigger	400	464	(493)	3717686
2542	10.8	0.6	0.0	chr7	106517461	106517813	(52828160)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3717687
373	30.9	3.3	4.9	chr7	106517814	106517930	(52828043)	+	Tigger16a	DNA/TcMar-Tigger	465	580	(377)	3717686
448	31.0	5.7	8.3	chr7	106517950	106518311	(52827662)	+	L2	LINE/L2	1916	2267	(1152)	3717688
12	15.4	5.3	2.5	chr7	106660255	106660292	(52685681)	+	(GCGCT)n	Simple_repeat	1	40	(0)	3717896
12	23.8	3.9	1.9	chr7	106660827	106660877	(52685096)	+	(CGCCGC)n	Simple_repeat	1	53	(0)	3717897
19	19.4	3.4	3.3	chr7	107044605	107044665	(52301308)	+	G-rich	Low_complexity	1	61	(0)	3718509
12	11.1	6.9	0.0	chr7	107044751	107044779	(52301194)	+	G-rich	Low_complexity	1	31	(0)	3718510
13	13.1	0.0	0.0	chr7	107045163	107045187	(52300786)	+	(GAG)n	Simple_repeat	1	25	(0)	3718511
196	38.0	2.7	3.4	chr7	107057198	107057344	(52288629)	+	L2	LINE/L2	2348	2493	(926)	3718530
702	24.9	11.1	4.1	chr7	107057549	107057766	(52288207)	+	MIR	SINE/MIR	18	252	(10)	3718531
303	23.8	6.9	4.5	chr7	107399214	107399307	(51946666)	+	L1MC	LINE/L1	5128	5230	(916)	3719025
2131	14.1	1.9	2.4	chr7	107399308	107399684	(51946289)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3719026
303	24.8	5.2	3.3	chr7	107399685	107399796	(51946177)	+	L1MC	LINE/L1	5231	5340	(806)	3719025
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
2855	6.5	0.0	0.0	chr7	111388524	111388878	(47957095)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3724263
267	35.0	11.7	2.6	chr7	112150983	112151141	(47194832)	+	L3b	LINE/CR1	4916	5098	(134)	3725360
480	29.3	5.8	5.5	chr7	112151142	112151399	(47194574)	+	MIRb	SINE/MIR	2	258	(10)	3725361
4158	11.1	0.2	1.0	chr7	112626910	112627048	(46718925)	C	L1PREC2	LINE/L1	(4)	6156	6023	3726104
2119	13.8	5.1	1.7	chr7	112627049	112627410	(46718563)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3726105
10551	10.7	3.0	0.1	chr7	113640225	113641757	(45704216)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3727363
2136	12.8	2.8	0.9	chr7	113641758	113642105	(45703868)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3727363
2418	23.9	3.5	1.4	chr7	113838576	113838902	(45507071)	+	L1MC4	LINE/L1	7240	7562	(480)	3727617
2056	14.2	5.0	2.0	chr7	113838903	113839255	(45506718)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3727618
180	25.9	0.0	1.8	chr7	114654009	114654063	(44691910)	+	MIRc	SINE/MIR	207	260	(8)	3728663
18	7.8	0.0	0.0	chr7	114922577	114922603	(44423370)	+	(GGA)n	Simple_repeat	1	27	(0)	3729032
14	22.7	4.5	4.3	chr7	116672312	116672378	(42673595)	+	(GGCG)n	Simple_repeat	1	70	(0)	3731400
16	22.5	4.7	5.6	chr7	116672439	116672524	(42673449)	+	(GAGCG)n	Simple_repeat	1	90	(0)	3731401
451	21.6	7.3	0.0	chr7	116991191	116991292	(42354681)	C	MamGypLTR1d	LTR/Gypsy	(641)	172	63	3731927
2518	10.5	1.1	1.1	chr7	116991306	116991660	(42354313)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3731928
11996	10.2	1.7	0.0	chr7	116991661	116993213	(42352760)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3731928
513	24.8	4.5	9.9	chr7	117437077	117437380	(41908593)	C	L2a	LINE/L2	(746)	2673	2387	3732535
5030	18.4	2.5	2.7	chr7	119869489	119869703	(39476270)	C	L1MA10	LINE/L1	(876)	5458	5256	3735668
1902	13.6	5.9	2.5	chr7	119869718	119870079	(39475894)	+	THE1D	LTR/ERVL-MaLR	2	376	(5)	3735670
14	12.5	0.0	0.0	chr7	120857964	120857989	(38487984)	+	(CCG)n	Simple_repeat	1	26	(0)	3736916
18	4.8	0.0	0.0	chr7	120857994	120858015	(38487958)	+	(A)n	Simple_repeat	1	22	(0)	3736917
302	23.7	8.7	12.0	chr7	121395853	121396068	(37949905)	+	L1M4b	LINE/L1	472	679	(6188)	3737604
16	30.9	1.4	1.4	chr7	121396138	121396206	(37949767)	+	(CCGC)n	Simple_repeat	1	70	(0)	3737605
1864	12.0	16.1	2.7	chr7	121689322	121689690	(37656283)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3738064
1998	16.0	4.8	0.6	chr7	122153265	122153623	(37192350)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3738725
36	2.7	0.0	0.0	chr7	124032403	124032440	(35313533)	+	(GCT)n	Simple_repeat	1	38	(0)	3741320
4673	8.4	1.8	0.9	chr7	124699402	124699909	(34646064)	C	L1PA10	LINE/L1	(11)	6157	5638	3742194
2227	14.2	1.1	0.0	chr7	124699910	124700260	(34645713)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3742195
4673	8.4	1.8	0.9	chr7	124700261	124700399	(34645574)	C	L1PA10	LINE/L1	(531)	5637	5504	3742194
1912	16.9	3.9	3.0	chr7	125810121	125810481	(33535492)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3743630
664	34.6	4.5	4.5	chr7	125810482	125810970	(33535003)	C	L1MEd	LINE/L1	(3371)	2775	2283	3743629
20	25.5	1.1	6.3	chr7	127588308	127588401	(31757572)	+	G-rich	Low_complexity	1	95	(0)	3745955
15	27.6	4.6	0.0	chr7	127588434	127588498	(31757475)	+	(CCCGCG)n	Simple_repeat	1	68	(0)	3745956
1772	18.2	1.6	1.6	chr7	128122544	128122912	(31223061)	+	L1MB3	LINE/L1	5815	6183	(0)	3746643
747	19.0	0.0	0.0	chr7	129066558	129066673	(30279300)	C	FLAM_A	SINE/Alu	(25)	117	2	3748405
18	14.0	0.0	0.0	chr7	129611701	129611732	(29734241)	+	(CGG)n	Simple_repeat	1	32	(0)	3749522
13	21.0	3.2	6.2	chr7	129611757	129611818	(29734155)	+	(AGGCGC)n	Simple_repeat	1	64	(0)	3749523
19	19.9	3.9	0.0	chr7	129611882	129611933	(29734040)	+	(CCGC)n	Simple_repeat	1	54	(0)	3749524
16	16.9	7.3	1.7	chr7	129612180	129612234	(29733739)	+	G-rich	Low_complexity	1	59	(0)	3749525
22	12.7	0.0	4.3	chr7	129612296	129612342	(29733631)	+	(GCGG)n	Simple_repeat	1	47	(0)	3749526
12	17.6	11.7	1.5	chr7	131556299	131556358	(27789615)	+	(GCA)n	Simple_repeat	1	67	(0)	3753008
24	24.7	1.5	0.0	chr7	131556574	131556640	(27789333)	+	(GCG)n	Simple_repeat	1	68	(0)	3753009
23	10.6	2.4	0.0	chr7	131556650	131556702	(27789271)	+	(GCCCCC)n	Simple_repeat	1	54	(0)	3753010
22	10.1	0.0	6.2	chr7	131556723	131556770	(27789203)	+	(GGCCG)n	Simple_repeat	1	48	(0)	3753011
2696	9.6	0.3	1.4	chr7	131936918	131937285	(27408688)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3753706
517	24.6	4.7	1.4	chr7	134995692	134995835	(24350138)	C	LTR86A1	LTR/ERVL	(142)	371	223	3758356
2620	8.8	0.6	0.3	chr7	135156770	135157123	(24188850)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3758526
2091	11.1	0.0	0.0	chr7	135308090	135308359	(24037614)	+	AluSx1	SINE/Alu	7	276	(36)	3758724
2009	13.8	2.6	9.9	chr7	135308360	135308579	(24037394)	+	THE1D	LTR/ERVL-MaLR	183	381	(0)	3758723
26	25.8	1.3	1.3	chr7	135509714	135509790	(23836183)	+	GA-rich	Low_complexity	1	78	(0)	3759070
2395	9.1	1.1	5.1	chr7	135535603	135535837	(23810136)	+	THE1A	LTR/ERVL-MaLR	1	235	(120)	3759133
2642	5.8	0.0	0.3	chr7	135535838	135536148	(23809825)	+	AluY	SINE/Alu	1	310	(1)	3759134
2344	10.6	4.4	3.3	chr7	136006195	136006554	(23339419)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3759966
2267	11.5	4.5	1.4	chr7	137850794	137851162	(21494811)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3762482
1887	16.2	0.0	4.7	chr7	138034391	138034710	(21311263)	C	AluSx	SINE/Alu	(7)	305	1	3762772
1087	18.4	9.3	7.1	chr7	138034711	138034774	(21311199)	+	MER4-int	LTR/ERV1	1506	1555	(5043)	3762768
2288	12.2	0.8	0.8	chr7	138034787	138035141	(21310832)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3762773
2319	8.6	0.3	0.0	chr7	138035142	138035466	(21310507)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1255	3762773
16	20.5	0.0	0.0	chr7	138460183	138460221	(20885752)	+	G-rich	Low_complexity	1	39	(0)	3763674
14	16.1	0.0	0.0	chr7	138460459	138460486	(20885487)	+	GA-rich	Low_complexity	1	28	(0)	3763675
12	19.6	7.0	5.3	chr7	138460756	138460826	(20885147)	+	(CTGC)n	Simple_repeat	1	76	(0)	3763676
15	4.3	4.2	0.0	chr7	138461132	138461155	(20884818)	+	(CCG)n	Simple_repeat	1	25	(0)	3763677
993	27.2	2.2	3.7	chr7	139011333	139011607	(20334366)	+	MER74A	LTR/ERVL	29	302	(256)	3764725
815	9.7	0.9	0.0	chr7	139011608	139011715	(20334258)	+	MER4E1	LTR/ERV1	1	109	(657)	3764728
2839	7.9	0.3	0.0	chr7	139011716	139012069	(20333904)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3764729
15	17.8	2.6	0.0	chr7	139360345	139360382	(19985591)	+	G-rich	Low_complexity	1	39	(0)	3765423
10992	10.2	3.5	0.5	chr7	139803026	139804557	(19541416)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3766211
2296	12.1	4.4	0.3	chr7	139804560	139804906	(19541067)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	3766211
581	28.9	14.8	1.9	chr7	140404758	140405067	(18940906)	+	L3	LINE/CR1	3659	4015	(84)	3767353
23	15.1	0.0	2.2	chr7	140479183	140479228	(18866745)	+	(GCC)n	Simple_repeat	1	46	(0)	3767540
13	21.8	0.0	0.0	chr7	140479268	140479300	(18866673)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	3767541
19	24.8	2.1	6.1	chr7	140924604	140924699	(18421274)	+	(CGGCGC)n	Simple_repeat	1	98	(0)	3768435
32	2.3	4.3	2.1	chr7	140924758	140924803	(18421170)	+	(GGAGGC)n	Simple_repeat	1	48	(0)	3768436
2655	27.9	5.9	1.4	chr7	141108085	141108818	(18237155)	C	L2a	LINE/L2	(1445)	1974	1209	3768776
2190	12.3	3.9	3.9	chr7	141108819	141109182	(18236791)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3768778
2655	27.9	5.9	1.4	chr7	141109183	141109459	(18236514)	C	L2a	LINE/L2	(2211)	1208	914	3768776
256	23.1	10.0	0.0	chr7	141551677	141551784	(17794189)	+	MIR3	SINE/MIR	27	146	(62)	3769473
431	14.1	6.6	1.0	chr7	141737593	141737692	(17608281)	+	MER96B	DNA/hAT-Tip100	263	368	(49)	3769755
22	19.9	0.0	0.0	chr7	141737767	141737807	(17608166)	+	(T)n	Simple_repeat	1	41	(0)	3769756
1540	14.3	1.3	0.0	chr7	141737809	141738038	(17607935)	C	AluJb	SINE/Alu	(2)	310	78	3769757
30770	15.4	2.8	0.9	chr7	141842616	141847857	(17498116)	+	LTR57-int	LTR/ERVL	1	5343	(0)	3769894
2808	6.8	0.6	0.0	chr7	142435603	142435955	(16910018)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3770628
11353	10.5	1.7	0.1	chr7	142726004	142727555	(16618418)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	3	3770944
2596	9.5	2.0	0.0	chr7	142727558	142727905	(16618068)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3770944
13	27.1	1.2	7.3	chr7	143362459	143362539	(15983434)	+	G-rich	Low_complexity	1	82	(0)	3771808
16	21.8	8.5	1.1	chr7	143362710	143362765	(15983208)	+	(CTCCG)n	Simple_repeat	1	61	(0)	3771809
34	0.0	0.0	0.0	chr7	143362766	143362796	(15983177)	+	(CGC)n	Simple_repeat	1	31	(0)	3771810
16	21.8	8.5	1.1	chr7	143362797	143362848	(15983125)	+	(CTCCG)n	Simple_repeat	1	55	(0)	3771811
2435	7.1	5.8	0.0	chr7	144567451	144567773	(14778200)	C	THE1A	LTR/ERVL-MaLR	(0)	355	13	3773380
371	28.8	12.0	2.9	chr7	144835294	144835497	(14510476)	C	MIRb	SINE/MIR	(23)	245	21	3773750
2537	6.4	0.0	0.3	chr7	144836403	144836699	(14509274)	+	AluSx3	SINE/Alu	1	296	(15)	3773751
3827	15.7	5.8	5.4	chr7	145687135	145687838	(13658135)	+	MER61-int	LTR/ERV1	2	703	(4514)	3774955
2665	8.8	0.6	0.0	chr7	145687839	145688191	(13657782)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3774956
33	11.4	1.3	6.5	chr7	146116098	146116173	(13229800)	+	GA-rich	Low_complexity	1	77	(0)	3775457
26	0.0	0.0	0.0	chr7	146116215	146116239	(13229734)	+	(GGC)n	Simple_repeat	1	25	(0)	3775458
2023	13.4	2.4	2.4	chr7	146130663	146131043	(13214930)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3775474
35	9.5	4.1	2.6	chr7	146309505	146309519	(13036454)	+	GA-rich	Low_complexity	1	17	(0)	3775723
2239	11.4	1.0	0.0	chr7	146309520	146309826	(13036147)	+	AluSx1	SINE/Alu	1	310	(2)	3775724
1260	12.3	0.0	0.0	chr7	147860441	147860603	(11485370)	+	AluSx1	SINE/Alu	134	296	(16)	3777845
989	14.4	3.4	1.0	chr7	147860604	147860807	(11485166)	+	THE1D	LTR/ERVL-MaLR	173	381	(0)	3777843
18	24.7	1.5	4.3	chr7	148699038	148699105	(10646868)	+	(CGG)n	Simple_repeat	1	69	(0)	3779245
1306	10.0	0.0	0.0	chr7	149064996	149065165	(10280808)	+	AluSz6	SINE/Alu	135	304	(8)	3779938
26	2.6	4.9	2.3	chr7	149091051	149091091	(10254882)	+	(CAGGGA)n	Simple_repeat	1	43	(0)	3780003
16	25.2	0.0	3.6	chr7	149147655	149147709	(10198264)	+	(CGG)n	Simple_repeat	1	55	(0)	3780152
2199	11.2	0.0	4.1	chr7	149208183	149208502	(10137471)	C	AluSz	SINE/Alu	(5)	307	1	3780289
15	0.0	0.0	0.0	chr7	149239672	149239690	(10106283)	+	(CGG)n	Simple_repeat	1	19	(0)	3780360
12	21.6	5.6	5.3	chr7	149262051	149262121	(10083852)	+	(GCCGCGG)n	Simple_repeat	1	75	(0)	3780412
14	10.1	6.2	0.0	chr7	149262245	149262276	(10083697)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	3780413
187	29.1	7.2	1.9	chr7	149690746	149690850	(9655123)	+	MER5A	DNA/hAT-Charlie	56	166	(23)	3781035
627	4.1	0.0	0.0	chr7	149691180	149691252	(9654721)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	3781036
16	13.4	0.0	2.9	chr7	149714673	149714707	(9631266)	+	G-rich	Low_complexity	1	35	(0)	3781084
2669	10.3	1.6	0.0	chr7	149739825	149740182	(9605791)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3781108
2617	9.4	1.4	0.6	chr7	149887706	149888057	(9457916)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3781278
276	16.4	5.2	13.1	chr7	149888080	149888163	(9457810)	+	MLT1H	LTR/ERVL-MaLR	473	549	(0)	3781279
662	23.1	11.6	1.6	chr7	149888200	149888613	(9457360)	C	L1MC5a	LINE/L1	(463)	5779	5254	3781280
38	4.2	4.1	0.0	chr7	150003131	150003179	(9342794)	+	(TG)n	Simple_repeat	1	51	(0)	3781443
328	16.4	7.8	3.8	chr7	150003183	150004275	(9341698)	+	(GT)n	Simple_repeat	1	1178	(0)	3781444
2300	11.3	0.3	0.0	chr7	151068859	151069159	(8276814)	+	AluY	SINE/Alu	2	303	(8)	3782855
393	27.5	7.8	5.2	chr7	151069163	151069373	(8276600)	C	Tigger15a	DNA/TcMar-Tigger	(476)	239	23	3782856
19	14.8	5.4	3.4	chr7	151519191	151519246	(7826727)	+	(CCCG)n	Simple_repeat	1	59	(0)	3783576
18	29.5	0.0	5.5	chr7	151519551	151519641	(7826332)	+	(GCGGCG)n	Simple_repeat	1	91	(0)	3783577
15	23.4	3.9	5.0	chr7	151631866	151631942	(7714031)	+	(CCCCGGA)n	Simple_repeat	1	80	(0)	3783798
13	18.8	0.0	5.0	chr7	151632021	151632060	(7713913)	+	(GGCCG)n	Simple_repeat	1	40	(0)	3783799
16	13.1	3.4	8.2	chr7	151632244	151632302	(7713671)	+	G-rich	Low_complexity	1	61	(0)	3783800
18	23.4	1.4	5.5	chr7	151632301	151632372	(7713601)	+	(CGC)n	Simple_repeat	1	73	(0)	3783801
14	11.7	3.6	0.0	chr7	151876780	151876807	(7469166)	+	(CGC)n	Simple_repeat	1	29	(0)	3784166
18	23.4	4.0	3.9	chr7	151877458	151877532	(7468441)	+	(CGC)n	Simple_repeat	1	78	(0)	3784167
2104	12.2	5.2	1.9	chr7	151971640	151972007	(7373966)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3784346
10030	9.3	10.7	1.6	chr7	151972008	151973174	(7372799)	+	THE1D-int	LTR/ERVL-MaLR	1	1321	(310)	3784346
1762	15.0	0.7	1.7	chr7	152025174	152025473	(7320500)	C	7SLRNA	srpRNA	(5)	315	19	3784461
16	22.0	5.4	3.9	chr7	152025618	152025691	(7320282)	+	(CGCGG)n	Simple_repeat	1	78	(0)	3784462
23	12.4	3.5	5.0	chr7	152025935	152025992	(7319981)	+	(GCG)n	Simple_repeat	1	60	(0)	3784463
13	24.6	2.3	0.0	chr7	152436347	152436389	(6909584)	+	(GCTC)n	Simple_repeat	1	44	(0)	3785121
29	0.0	0.0	0.0	chr7	152436749	152436775	(6909198)	+	(CTCCGG)n	Simple_repeat	1	27	(0)	3785122
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
5374	10.5	4.1	5.5	chr7	152612345	152612801	(6733172)	C	L1MA3	LINE/L1	(183)	6122	5651	3785575
2809	6.8	0.6	0.0	chr7	152612802	152613154	(6732819)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3785578
5374	10.5	4.1	5.5	chr7	152613155	152613382	(6732591)	C	L1MA3	LINE/L1	(655)	5650	5442	3785575
2149	12.7	0.0	0.0	chr7	152752907	152753197	(6592776)	C	AluSx1	SINE/Alu	(14)	298	8	3785932
1869	14.8	3.6	10.7	chr7	152753198	152753506	(6592467)	C	THE1B	LTR/ERVL-MaLR	(62)	302	1	3785931
4396	15.5	0.8	1.5	chr7	152753507	152753617	(6592356)	C	MER72	LTR/ERV1	(611)	111	1	3785930
1276	13.8	0.5	0.5	chr7	152987003	152987213	(6358760)	C	L1MA9	LINE/L1	(848)	5292	5082	3786312
5397	15.6	3.0	5.1	chr7	152987207	152987251	(6358722)	+	L1MA9	LINE/L1	5295	5337	(975)	3786312
2785	8.6	1.1	0.0	chr7	152987252	152987602	(6358371)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3786313
2178	22.9	2.5	9.8	chr7	153094911	153095017	(6250956)	+	L1MC4	LINE/L1	6450	6541	(1501)	3786504
1824	16.0	5.5	3.6	chr7	153095018	153095374	(6250599)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3786505
2178	25.7	6.4	5.8	chr7	153095375	153096590	(6249383)	+	L1MC4	LINE/L1	6542	7902	(140)	3786504
1906	17.2	4.1	3.3	chr7	153574939	153575299	(5770674)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3787125
10866	11.3	0.7	2.7	chr7	153575300	153575759	(5770214)	+	THE1B-int	LTR/ERVL-MaLR	1	456	(1124)	3787125
2756	7.7	0.3	0.6	chr7	153792731	153793085	(5552888)	+	THE1A	LTR/ERVL-MaLR	1	354	(1)	3787433
18	14.5	2.6	0.0	chr7	153862534	153862571	(5483402)	+	(GTTTT)n	Simple_repeat	1	39	(0)	3787535
2134	16.4	2.8	1.4	chr7	154500406	154500764	(4845209)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3788351
1718	13.9	10.6	4.5	chr7	155323260	155323614	(4022359)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	3789509
406	29.2	12.5	1.6	chr7	155323615	155323767	(4022206)	C	L1M5	LINE/L1	(614)	5510	5319	3789508
20	29.9	0.9	5.5	chr7	155458408	155458515	(3887458)	+	(GCG)n	Simple_repeat	1	109	(0)	3789660
24	24.5	2.5	2.4	chr7	155458648	155458728	(3887245)	+	(GGC)n	Simple_repeat	1	83	(0)	3789661
57	12.4	3.1	0.0	chr7	155509462	155509558	(3836415)	+	GA-rich	Low_complexity	1	100	(0)	3789721
15	24.6	2.0	2.0	chr7	155644567	155644616	(3701357)	+	(CGG)n	Simple_repeat	1	51	(0)	3789931
634	23.8	9.2	0.0	chr7	156093485	156093652	(3252321)	C	Tigger3b	DNA/TcMar-Tigger	(1046)	185	1	3790478
2240	12.3	2.2	0.3	chr7	156093794	156094143	(3251830)	+	THE1B	LTR/ERVL-MaLR	1	357	(7)	3790480
1951	7.8	0.0	0.0	chr7	156700558	156700828	(2645145)	C	THE1B-int	LTR/ERVL-MaLR	(1309)	271	1	3791235
1956	12.0	10.7	2.4	chr7	156700829	156701161	(2644812)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3791235
1014	15.9	4.1	0.5	chr7	156896360	156896548	(2449425)	C	THE1D	LTR/ERVL-MaLR	(0)	381	186	3791507
16	25.4	5.3	2.5	chr7	156896551	156896626	(2449347)	+	GA-rich	Low_complexity	1	80	(0)	3791508
659	15.2	12.1	0.0	chr7	156896633	156896770	(2449203)	C	THE1D	LTR/ERVL-MaLR	(169)	212	56	3791507
18	15.6	2.1	4.2	chr7	156908881	156908928	(2437045)	+	(AAC)n	Simple_repeat	1	47	(0)	3791541
434	29.9	13.7	6.2	chr7	157064284	157064503	(2281470)	+	MLT1J	LTR/ERVL-MaLR	74	319	(193)	3791792
272	38.0	3.7	7.6	chr7	157064554	157064601	(2281372)	+	L2b	LINE/L2	3026	3076	(299)	3791779
2918	4.9	1.4	0.0	chr7	157064602	157064951	(2281022)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3791794
272	38.0	3.7	7.6	chr7	157064952	157065073	(2280900)	+	L2b	LINE/L2	3077	3189	(186)	3791779
29	27.7	1.6	3.9	chr7	157337247	157337372	(2008601)	+	G-rich	Low_complexity	1	128	(0)	3792328
23	15.6	0.0	0.0	chr7	158587621	158587664	(758309)	+	(GCAGCA)n	Simple_repeat	1	44	(0)	3793401
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
13	16.3	2.8	2.7	chr7	159036706	159036741	(309232)	+	(GATGG)n	Simple_repeat	1	37	(0)	3794022
557	19.0	2.1	0.7	chr7	159153553	159153695	(192278)	+	Tigger2	DNA/TcMar-Tigger	2289	2433	(285)	3794145
1193	19.4	4.0	3.3	chr7	159153770	159154068	(191905)	+	Tigger2	DNA/TcMar-Tigger	2418	2718	(0)	3794146
364	33.0	8.7	0.5	chr8	1675262	1675462	(143463174)	+	MIRb	SINE/MIR	35	253	(15)	3795949
2229	13.0	0.3	2.5	chr8	2638183	2638545	(142500091)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3797087
2342	11.1	1.1	0.8	chr8	2810587	2810940	(142327696)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3797319
2258	11.9	4.8	0.0	chr8	3925495	3925831	(141212805)	+	THE1A	LTR/ERVL-MaLR	1	354	(1)	3798729
12	12.5	0.0	3.6	chr8	3925861	3925888	(141212748)	+	(TTATT)n	Simple_repeat	1	28	(0)	3798730
12	19.4	4.7	2.2	chr8	3925889	3925899	(141212737)	+	(TTTA)n	Simple_repeat	5	45	(0)	3798731
2056	13.9	2.3	0.0	chr8	8261121	8261414	(136877222)	+	AluSz	SINE/Alu	1	301	(11)	3804421
370	27.5	7.7	5.6	chr8	8261415	8261479	(136877157)	+	Charlie15b	DNA/hAT-Charlie	850	908	(153)	3804420
2726	8.5	0.6	0.0	chr8	8261480	8261832	(136876804)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3804422
370	27.5	7.7	5.6	chr8	8261833	8261923	(136876713)	+	Charlie15b	DNA/hAT-Charlie	909	1004	(57)	3804420
16	9.8	0.0	0.0	chr8	8872771	8872792	(136265844)	+	(A)n	Simple_repeat	1	22	(0)	3805485
9156	8.2	13.9	0.6	chr8	11794623	11795989	(133342647)	+	LTR12C	LTR/ERV1	1	1579	(0)	3810165
23	33.0	0.9	2.7	chr8	12754858	12754968	(132383668)	+	(GCG)n	Simple_repeat	1	112	(0)	3811505
11	9.6	8.6	2.6	chr8	13276803	13276837	(131861799)	+	(GCAGGTG)n	Simple_repeat	1	38	(0)	3812420
2465	10.6	1.4	0.3	chr8	14341594	14341944	(130796692)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3813886
7894	11.1	0.2	1.6	chr8	14341945	14342315	(130796321)	+	THE1A-int	LTR/ERVL-MaLR	1	362	(1218)	3813886
12	16.9	2.9	2.8	chr8	17156407	17156441	(127982195)	+	(GGC)n	Simple_repeat	1	36	(0)	3817787
30	18.9	3.7	2.4	chr8	17156444	17156525	(127982111)	+	(CGC)n	Simple_repeat	1	85	(0)	3817788
1635	13.4	7.8	2.1	chr8	17814503	17814830	(127323806)	C	THE1C	LTR/ERVL-MaLR	(27)	348	1	3818760
3390	14.1	4.8	5.2	chr8	22493392	22494103	(122644533)	C	Tigger3b	DNA/TcMar-Tigger	(521)	710	2	3826357
2396	8.0	5.3	2.3	chr8	22494137	22494480	(122644156)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3826358
2218	12.6	4.3	2.2	chr8	23510714	23511079	(121627557)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	3828051
2631	12.8	1.1	0.3	chr8	25021144	25021503	(120117133)	+	THE1B	LTR/ERVL-MaLR	1	363	(1)	3830347
4193	8.4	7.3	0.0	chr8	26324426	26325148	(118813488)	+	THE1A-int	LTR/ERVL-MaLR	805	1580	(0)	3832547
2591	8.4	1.1	0.6	chr8	26325155	26325503	(118813133)	+	THE1A	LTR/ERVL-MaLR	5	355	(0)	3832547
11	25.1	0.0	4.3	chr8	28494136	28494181	(116644455)	+	(GCGTGC)n	Simple_repeat	1	46	(0)	3836284
16	13.3	2.1	6.2	chr8	28494831	28494877	(116643759)	+	(GGCGCCC)n	Simple_repeat	1	48	(0)	3836285
18	0.0	0.0	0.0	chr8	28701618	28701640	(116436996)	+	(GGC)n	Simple_repeat	1	23	(0)	3836722
2216	12.6	3.6	2.5	chr8	30009942	30010299	(115128337)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	3838863
224	31.1	8.5	8.5	chr8	30279517	30279681	(114858955)	C	MamTip2	DNA/hAT-Tip100	(66)	239	75	3839446
2906	7.3	0.0	0.0	chr8	30312567	30312921	(114825715)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3839516
1878	12.9	8.2	3.6	chr8	30312922	30312982	(114825654)	+	THE1D	LTR/ERVL-MaLR	319	379	(2)	3839515
24	15.8	6.7	2.5	chr8	30384444	30384518	(114754118)	+	G-rich	Low_complexity	1	80	(0)	3839683
31	3.1	0.0	0.0	chr8	30384617	30384649	(114753987)	+	(CTC)n	Simple_repeat	1	33	(0)	3839684
27	0.0	3.5	0.0	chr8	30384746	30384774	(114753862)	+	(CTTC)n	Simple_repeat	1	30	(0)	3839685
13	15.9	5.7	0.0	chr8	30385041	30385075	(114753561)	+	(GCCCA)n	Simple_repeat	1	37	(0)	3839686
2456	9.8	2.3	2.5	chr8	37006724	37007077	(108131559)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	3849693
71	28.7	1.9	2.6	chr8	37007078	37007139	(108131497)	+	(TA)n	Simple_repeat	1	59	(0)	3849694
30	0.0	0.0	0.0	chr8	37698416	37698443	(107440193)	+	(CGC)n	Simple_repeat	1	28	(0)	3850808
2280	6.7	1.3	5.7	chr8	37898671	37898839	(107239797)	+	AluSx	SINE/Alu	145	300	(12)	3851169
225	30.4	1.6	9.4	chr8	37898840	37898901	(107239735)	C	L2c	LINE/L2	(83)	3292	3241	3851168
192	27.7	8.8	6.7	chr8	37949115	37949203	(107189433)	+	L2	LINE/L2	1856	1946	(1473)	3851283
927	15.2	5.3	0.6	chr8	37949207	37949254	(107189382)	+	MSTB1	LTR/ERVL-MaLR	1	53	(379)	3851291
2071	13.7	5.5	2.5	chr8	37949255	37949607	(107189029)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3851292
927	15.2	5.3	0.6	chr8	37949608	37949737	(107188899)	+	MSTB1	LTR/ERVL-MaLR	54	187	(245)	3851291
391	28.9	18.6	4.5	chr8	38705807	38706246	(106432390)	+	L2b	LINE/L2	1826	2352	(1067)	3852792
2223	13.8	2.6	2.1	chr8	38706247	38706623	(106432013)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	3852793
391	28.9	18.6	4.5	chr8	38706624	38706649	(106431987)	+	L2b	LINE/L2	2353	2373	(1046)	3852792
626	13.3	0.0	0.0	chr8	38706670	38706759	(106431877)	C	MER39B	LTR/ERV1	(20)	633	544	3852794
2169	13.6	5.2	2.3	chr8	41437659	41438011	(103700625)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3856992
389	28.6	9.4	1.3	chr8	41438029	41438184	(103700452)	+	L3	LINE/CR1	3806	3975	(124)	3856993
13	19.8	0.0	6.5	chr8	41828226	41828271	(103310365)	+	(CCCCG)n	Simple_repeat	1	46	(0)	3857668
367	31.1	7.5	2.9	chr8	42760692	42760830	(102377806)	C	L2a	LINE/L2	(248)	3178	3033	3859438
14	8.9	11.1	0.0	chr8	48008411	48008446	(97130190)	+	(GTGC)n	Simple_repeat	1	40	(0)	3862762
2262	12.2	3.6	2.5	chr8	51765131	51765490	(93373146)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3867220
6038	17.4	6.2	4.5	chr8	51765491	51765842	(93372794)	C	L1M4	LINE/L1	(3855)	2789	2421	3867218
402	18.4	19.1	0.7	chr8	52587423	52587575	(92551061)	+	MER5A	DNA/hAT-Charlie	1	188	(1)	3868350
1058	16.1	0.0	0.0	chr8	52587761	52587915	(92550721)	C	AluJo	SINE/Alu	(8)	304	150	3868351
425	20.3	1.7	0.0	chr8	52587923	52588040	(92550596)	C	L1MEf	LINE/L1	(4126)	2514	2395	3868352
1597	10.7	6.7	14.8	chr8	54843072	54843381	(90295255)	C	AluSx	SINE/Alu	(29)	283	1	3871642
467	28.3	10.7	2.1	chr8	55772631	55772818	(89365818)	C	MIRb	SINE/MIR	(61)	207	2	3872867
28	0.0	0.0	0.0	chr8	56210769	56210794	(88927842)	+	(GAG)n	Simple_repeat	1	26	(0)	3873665
16	14.4	0.0	0.0	chr8	56210928	56210958	(88927678)	+	(TTATT)n	Simple_repeat	1	31	(0)	3873666
30	0.0	0.0	0.0	chr8	56211301	56211328	(88927308)	+	(GCC)n	Simple_repeat	1	28	(0)	3873667
11185	8.4	1.3	0.0	chr8	56950441	56951975	(88186661)	C	THE1B-int	LTR/ERVL-MaLR	(25)	1555	1	3874631
2081	14.8	3.3	4.1	chr8	56951976	56952342	(88186294)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3874631
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
1485	28.3	1.5	2.6	chr8	57214477	57215085	(87923551)	C	MER50	LTR/ERV1	(123)	611	10	3874995
15	12.2	0.0	0.0	chr8	58659589	58659615	(86479021)	+	(GCT)n	Simple_repeat	1	27	(0)	3876891
2558	10.9	0.8	0.6	chr8	58867963	58868323	(86270313)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	3877192
12	20.4	5.6	3.5	chr8	61288286	61288339	(83850297)	+	(CCGCTCC)n	Simple_repeat	1	57	(0)	3880437
2588	9.6	0.3	0.6	chr8	61716139	61716494	(83422142)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3881002
6664	8.7	0.2	0.0	chr8	61716495	61717352	(83421284)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	721	3881002
2493	10.0	1.1	2.5	chr8	62717893	62718252	(82420384)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3882244
13	29.6	1.5	3.0	chr8	63038959	63039023	(82099613)	+	(GCCCGC)n	Simple_repeat	1	66	(0)	3882621
17	18.6	0.0	0.0	chr8	63038992	63039028	(82099608)	+	(CCCCGA)n	Simple_repeat	1	37	(0)	3882622
12	13.7	10.0	0.0	chr8	63168653	63168692	(81969944)	+	(CGAGAGAG)n	Simple_repeat	1	44	(0)	3882838
12	5.6	0.0	0.0	chr8	63168758	63168776	(81969860)	+	(CGG)n	Simple_repeat	1	19	(0)	3882839
14	5.0	0.0	0.0	chr8	63168838	63168858	(81969778)	+	(GGC)n	Simple_repeat	1	21	(0)	3882840
13	17.5	0.0	2.9	chr8	63169077	63169110	(81969526)	+	(GCGG)n	Simple_repeat	1	34	(0)	3882841
2466	11.4	0.6	0.3	chr8	65099891	65100243	(80038393)	+	THE1A	LTR/ERVL-MaLR	1	354	(1)	3885307
4302	14.8	4.6	6.6	chr8	65580517	65581437	(79557199)	+	L1PB4	LINE/L1	4609	5503	(653)	3885986
2853	9.0	0.3	0.0	chr8	65581438	65581791	(79556845)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3885988
2814	13.5	5.0	1.8	chr8	65581792	65582051	(79556585)	+	L1PB4	LINE/L1	5504	5775	(381)	3885986
34	0.0	0.0	0.0	chr8	65841964	65841994	(79296642)	+	(GCC)n	Simple_repeat	1	31	(0)	3886499
16	5.5	10.0	2.3	chr8	65842097	65842164	(79296472)	+	(GCGCCCA)n	Simple_repeat	1	73	(0)	3886500
12	13.7	0.0	0.0	chr8	66177114	66177137	(78961499)	+	(GCA)n	Simple_repeat	1	24	(0)	3886967
17	19.9	2.1	2.0	chr8	66177289	66177336	(78961300)	+	(CGGCTG)n	Simple_repeat	1	49	(0)	3886968
23	17.5	0.0	0.0	chr8	66666906	66666950	(78471686)	+	(GGC)n	Simple_repeat	1	45	(0)	3887825
14	15.6	5.6	0.0	chr8	66667191	66667226	(78471410)	+	(CACT)n	Simple_repeat	1	38	(0)	3887826
11	21.9	3.9	3.8	chr8	66667227	66667241	(78471395)	+	(CACTCA)n	Simple_repeat	1	53	(0)	3887827
29	0.0	0.0	0.0	chr8	67343821	67343847	(77794789)	+	(GCG)n	Simple_repeat	1	27	(0)	3889097
17	24.9	1.2	6.2	chr8	67343866	67343945	(77794691)	+	(CGCGG)n	Simple_repeat	1	81	(0)	3889098
1970	12.4	5.0	5.5	chr8	68132970	68133352	(77005284)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3890293
2784	9.1	0.0	0.3	chr8	69132026	69132411	(76006225)	+	L1PA5	LINE/L1	5770	6154	(0)	3891588
2427	9.8	0.3	0.0	chr8	69132416	69132741	(76005895)	C	THE1A	LTR/ERVL-MaLR	(28)	327	1	3891583
11227	10.3	1.1	1.2	chr8	69134257	69134617	(76004019)	C	THE1A-int	LTR/ERVL-MaLR	(1224)	356	1	3891583
2612	9.6	0.6	0.3	chr8	69134618	69134971	(76003665)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3891583
10249	13.6	2.9	1.9	chr8	69134972	69136749	(76001887)	C	L1PB1	LINE/L1	(4369)	2494	749	3891580
2688	8.2	0.6	0.0	chr8	71514451	71514803	(73623833)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3895319
561	24.3	13.6	8.2	chr8	71514804	71514936	(73623700)	+	L1M7	LINE/L1	2285	2421	(0)	3895317
11459	10.7	0.8	0.0	chr8	71902428	71903995	(73234641)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3895805
2613	9.3	0.3	1.4	chr8	71903996	71904353	(73234283)	C	THE1A	LTR/ERVL-MaLR	(0)	355	2	3895805
2854	5.9	0.0	2.7	chr8	72766823	72767187	(72371449)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3896890
11	18.2	2.4	4.8	chr8	73294579	73294619	(71844017)	+	(AGCGCGG)n	Simple_repeat	1	42	(0)	3897759
16	19.8	1.7	6.6	chr8	73294989	73295048	(71843588)	+	(GCCG)n	Simple_repeat	1	61	(0)	3897760
491	16.3	0.0	0.0	chr8	74224315	74224400	(70914236)	+	L1MB3	LINE/L1	6058	6143	(40)	3899406
2694	8.8	0.3	0.0	chr8	74224401	74224754	(70913882)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3899407
11913	8.6	0.8	0.2	chr8	74224755	74226325	(70912311)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3899407
27	29.3	0.0	5.7	chr8	74321412	74321535	(70817101)	+	(CGC)n	Simple_repeat	1	124	(0)	3899515
2174	13.2	4.4	1.1	chr8	74532354	74532705	(70605931)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3899779
20	3.1	6.1	0.0	chr8	75407735	75407767	(69730869)	+	(AAAC)n	Simple_repeat	1	35	(0)	3900915
39	7.9	1.8	0.0	chr8	75408225	75408279	(69730357)	+	(AG)n	Simple_repeat	1	56	(0)	3900916
9322	27.4	3.0	1.6	chr8	77673156	77674342	(67464294)	+	L1MA6	LINE/L1	835	2025	(5461)	3903789
1921	14.2	6.0	1.1	chr8	77674343	77674704	(67463932)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3903790
2066	12.3	4.0	1.2	chr8	78265848	78266192	(66872444)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3904452
10507	11.7	2.3	0.6	chr8	78266193	78267746	(66870890)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3904452
1844	13.6	4.9	6.2	chr8	79688472	79688823	(65449813)	C	THE1B	LTR/ERVL-MaLR	(0)	364	18	3906342
17	10.3	0.0	3.0	chr8	79767998	79768030	(65370606)	+	(CCCCGC)n	Simple_repeat	1	33	(0)	3906480
29	6.4	1.9	3.7	chr8	79768280	79768332	(65370304)	+	(GGC)n	Simple_repeat	1	54	(0)	3906481
2402	13.5	0.6	0.8	chr8	79814297	79814661	(65323975)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3906568
17	18.6	0.0	0.0	chr8	80171178	80171215	(64967421)	+	(CTCACA)n	Simple_repeat	1	38	(0)	3907147
27	15.9	1.7	1.7	chr8	80171332	80171405	(64967231)	+	(AGCCCA)n	Simple_repeat	1	74	(0)	3907148
13	11.2	3.2	3.1	chr8	80487045	80487075	(64651561)	+	(GCC)n	Simple_repeat	1	32	(0)	3907903
19	25.2	1.2	5.9	chr8	80487371	80487475	(64651161)	+	(GGC)n	Simple_repeat	1	100	(0)	3907904
24	21.8	4.4	3.2	chr8	81112145	81112234	(64026402)	+	G-rich	Low_complexity	1	94	(0)	3908830
18	16.0	0.0	0.0	chr8	85107298	85107332	(60031304)	+	(GGC)n	Simple_repeat	1	35	(0)	3914051
27	20.0	1.3	4.0	chr8	85177479	85177553	(59961083)	+	(GCC)n	Simple_repeat	1	76	(0)	3914155
19176	10.0	0.2	0.5	chr8	85737907	85741568	(59397068)	+	L1PA5	LINE/L1	2507	6152	(2)	3914958
9953	10.6	0.1	0.7	chr8	85742400	85743923	(59394713)	C	L1P1	LINE/L1	(2125)	4021	2507	3914963
1662	13.7	4.4	4.7	chr8	86513855	86514153	(58624483)	C	AluJo	SINE/Alu	(14)	298	1	3916200
13	10.8	6.5	0.0	chr8	86514397	86514427	(58624209)	+	(CCCGCC)n	Simple_repeat	1	33	(0)	3916201
1777	16.1	6.8	1.1	chr8	86971084	86971442	(58167194)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3916854
17	3.6	6.9	0.0	chr8	88327250	88327278	(56811358)	+	(CTCC)n	Simple_repeat	1	31	(0)	3918471
35	29.0	0.0	0.9	chr8	88327496	88327602	(56811034)	+	(CGC)n	Simple_repeat	1	107	(0)	3918472
1678	13.9	11.3	2.3	chr8	91832405	91832750	(53305886)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3923016
13	19.0	0.0	5.0	chr8	92102807	92102846	(53035790)	+	(GCCC)n	Simple_repeat	1	40	(0)	3923412
16	10.5	3.2	0.0	chr8	92103158	92103188	(53035448)	+	(CTCC)n	Simple_repeat	1	32	(0)	3923413
17	21.4	3.9	5.0	chr8	92103352	92103428	(53035208)	+	(GCGCCGC)n	Simple_repeat	1	80	(0)	3923414
12	9.8	0.0	0.0	chr8	92103580	92103601	(53035035)	+	(GGGC)n	Simple_repeat	1	22	(0)	3923415
696	15.3	6.1	0.0	chr8	92236068	92236191	(52902445)	C	AluJb	SINE/Alu	(2)	310	179	3923619
2109	12.3	0.9	2.6	chr8	92236193	92236542	(52902094)	C	THE1A	LTR/ERVL-MaLR	(0)	355	12	3923620
4111	8.0	0.0	0.0	chr8	92236543	92237055	(52901581)	+	MER9a2	LTR/ERVK	1	513	(0)	3923621
11812	9.0	0.6	0.2	chr8	92242736	92244309	(52894327)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3923623
2211	13.0	2.5	0.3	chr8	92244310	92244656	(52893980)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3923623
314	22.2	0.0	0.0	chr8	92244657	92244710	(52893926)	C	AluJb	SINE/Alu	(120)	182	129	3923619
919	14.4	0.0	0.0	chr8	92244716	92244840	(52893796)	C	AluJo	SINE/Alu	(187)	125	1	3923624
2334	19.4	4.3	4.5	chr8	94619337	94619421	(50519215)	+	L1MD2	LINE/L1	6276	6359	(0)	3927230
2759	7.6	0.3	1.1	chr8	94619486	94619843	(50518793)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3927232
214	26.8	15.2	5.1	chr8	94719427	94719544	(50419092)	+	MIR3	SINE/MIR	18	149	(59)	3927427
13	28.3	5.4	1.3	chr8	94720070	94720143	(50418493)	+	(GGCGGT)n	Simple_repeat	1	78	(0)	3927428
14	18.4	2.0	6.0	chr8	94823415	94823463	(50315173)	+	(GCG)n	Simple_repeat	1	50	(0)	3927665
3562	18.7	5.7	5.5	chr8	96052073	96052375	(49086261)	+	L1MA9	LINE/L1	5305	5626	(686)	3929676
2224	13.1	0.8	0.8	chr8	96052376	96052730	(49085906)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3929678
407	29.6	12.9	0.0	chr8	97265878	97266039	(47872597)	+	MIRb	SINE/MIR	67	252	(16)	3931482
2327	11.0	4.0	2.7	chr8	97357108	97357481	(47781155)	C	THE1D	LTR/ERVL-MaLR	(0)	381	3	3931604
417	25.3	16.7	5.9	chr8	97357540	97357778	(47780858)	C	Charlie7a	DNA/hAT-Charlie	(2)	270	1	3931605
14	19.1	0.0	6.4	chr8	97644083	97644129	(47494507)	+	(GCCCC)n	Simple_repeat	1	47	(0)	3932076
15	27.2	2.0	0.0	chr8	98426887	98426935	(46711701)	+	(GCG)n	Simple_repeat	1	50	(0)	3933666
13	21.3	0.0	0.0	chr8	99012974	99013006	(46125630)	+	(GCCGCA)n	Simple_repeat	1	33	(0)	3934592
2313	12.2	1.1	0.0	chr8	99912102	99912452	(45226184)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3935869
996	20.7	0.0	6.3	chr8	99912453	99912517	(45226119)	C	L1MB2	LINE/L1	(548)	5635	5571	3935867
21	21.2	3.3	6.3	chr8	100722185	100722276	(44416360)	+	GA-rich	Low_complexity	1	95	(0)	3937327
13	28.1	1.7	3.3	chr8	100722203	100722314	(44416322)	+	G-rich	Low_complexity	1	110	(0)	3937328
13	18.1	0.0	7.0	chr8	102806671	102806713	(42331923)	+	G-rich	Low_complexity	1	43	(0)	3941146
36	2.7	0.0	0.0	chr8	103140446	103140483	(41998153)	+	(GGAT)n	Simple_repeat	1	38	(0)	3941813
23	30.6	3.5	1.7	chr8	103499883	103499997	(41638639)	+	(GGC)n	Simple_repeat	1	119	(0)	3942425
594	32.7	11.6	3.5	chr8	105043921	105044023	(40094613)	C	L1MC	LINE/L1	(1964)	4182	4085	3944630
1955	11.9	2.8	5.5	chr8	105044024	105044387	(40094249)	C	THE1A	LTR/ERVL-MaLR	(0)	355	2	3944631
594	32.7	11.6	3.5	chr8	105044388	105044859	(40093777)	C	L1MC	LINE/L1	(2062)	4084	3554	3944630
12	21.1	2.5	2.4	chr8	105173240	105173279	(39965357)	+	(GCT)n	Simple_repeat	1	41	(0)	3944817
2267	13.9	0.6	0.3	chr8	105254890	105255243	(39883393)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3944906
1952	16.4	0.6	4.1	chr8	105297857	105298224	(39840412)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3944955
2645	30.9	8.6	3.9	chr8	105298225	105298899	(39839737)	C	MLT1J1-int	LTR/ERVL-MaLR	(650)	737	2	3944953
2325	9.9	0.7	0.0	chr8	105358677	105358969	(39779667)	+	AluSc	SINE/Alu	1	295	(14)	3945030
1752	13.1	8.5	4.0	chr8	105359015	105359363	(39779273)	+	THE1C	LTR/ERVL-MaLR	1	381	(47)	3945031
2557	7.7	0.3	0.0	chr8	105359364	105359673	(39778963)	C	AluSc8	SINE/Alu	(0)	311	1	3945032
3198	21.9	4.8	4.0	chr8	106103648	106104556	(39034080)	C	ERV3-16A3_I-int	LTR/ERVL	(2162)	3064	2148	3946026
1556	29.5	6.7	2.5	chr8	106253286	106254199	(38884437)	C	ERVL-E-int	LTR/ERVL	(2884)	2830	1782	3946253
5767	9.1	0.6	4.7	chr8	106254314	106254385	(38884251)	C	L1PB1	LINE/L1	(35)	6832	6762	3946254
1866	17.7	1.4	0.6	chr8	106254386	106254737	(38883899)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3946255
5767	9.1	0.6	4.7	chr8	106254738	106254996	(38883640)	C	L1PB1	LINE/L1	(106)	6761	6506	3946254
382	36.1	9.6	0.5	chr8	107797841	107798210	(37340426)	C	L2a	LINE/L2	(14)	3412	3006	3948461
2249	12.9	1.1	0.6	chr8	107798214	107798557	(37340079)	C	THE1A	LTR/ERVL-MaLR	(0)	355	10	3948462
311	22.1	6.1	2.5	chr8	107798557	107798635	(37340001)	+	FordPrefect	DNA/hAT-Tip100	1601	1682	(1)	3948463
2455	9.7	1.1	0.8	chr8	108341182	108341535	(36797101)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3949223
420	36.0	13.0	2.2	chr8	108692855	108693223	(36445413)	C	L2b	LINE/L2	(28)	3347	2933	3949726
11548	9.5	1.5	0.1	chr8	109945903	109947460	(35191176)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3951522
2582	10.4	0.3	0.0	chr8	109947461	109947814	(35190822)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3951522
6919	20.1	7.2	4.0	chr8	109947815	109949008	(35189628)	C	L1MC3	LINE/L1	(1114)	6846	5559	3951518
5204	12.3	0.1	0.4	chr8	110633171	110633915	(34504721)	+	THE1C-int	LTR/ERVL-MaLR	838	1580	(0)	3952462
1759	16.6	5.3	2.7	chr8	110633916	110634280	(34504356)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3952462
1734	14.9	6.6	2.7	chr8	110903101	110903466	(34235170)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3952809
2907	14.2	3.7	2.4	chr8	110903469	110904058	(34234578)	+	L1MA8	LINE/L1	5693	6290	(1)	3952810
10789	11.3	1.2	1.2	chr8	111363823	111365402	(33773234)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3953430
2290	11.4	0.8	1.1	chr8	111365403	111365758	(33772878)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3953430
4408	12.6	2.6	9.4	chr8	114236175	114237033	(30901603)	+	LTR1A1	LTR/ERV1	1	799	(0)	3957112
19	3.0	5.3	5.0	chr8	116938473	116938510	(28200126)	+	(GGC)n	Simple_repeat	1	40	(0)	3960865
30	16.8	3.9	2.5	chr8	118111659	118111735	(27026901)	+	(GCG)n	Simple_repeat	1	80	(0)	3962716
1111	17.6	0.5	0.0	chr8	118119837	118120024	(27018612)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	3962736
736	31.6	4.6	4.8	chr8	118120025	118120251	(27018385)	C	L2a	LINE/L2	(406)	3013	2785	3962734
2050	15.4	4.6	0.8	chr8	118265937	118266295	(26872341)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	3963007
362	34.4	4.5	7.6	chr8	118556998	118557063	(26581573)	C	L2c	LINE/L2	(124)	3263	3196	3963493
1845	15.6	4.0	1.9	chr8	118557064	118557430	(26581206)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3963496
362	34.4	4.5	7.6	chr8	118557431	118557559	(26581077)	C	L2c	LINE/L2	(192)	3195	3074	3963493
828	35.3	6.5	3.8	chr8	119643613	119644397	(25494239)	C	L2b	LINE/L2	(13)	3362	2559	3965113
9999	11.9	3.3	2.4	chr8	121218654	121220213	(23918423)	C	THE1D-int	LTR/ERVL-MaLR	(5)	1575	1	3967890
2290	13.0	2.7	0.0	chr8	121906497	121906850	(23231786)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3969072
2565	9.8	2.5	0.3	chr8	122718510	122718856	(22419780)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3970397
2225	6.9	0.7	0.0	chr8	122718857	122719145	(22419491)	+	THE1A-int	LTR/ERVL-MaLR	1	291	(1289)	3970397
1789	10.5	8.9	6.3	chr8	123148876	123149058	(21989578)	+	AluSx	SINE/Alu	103	293	(19)	3971265
186	29.5	1.3	8.2	chr8	123149138	123149222	(21989414)	C	L3	LINE/CR1	(259)	3840	3762	3971267
801	29.4	13.3	6.2	chr8	123668346	123668812	(21469824)	C	L2a	LINE/L2	(0)	3426	2922	3972345
937	29.2	3.5	1.2	chr8	123668809	123669144	(21469492)	C	L2a	LINE/L2	(666)	2753	2410	3972345
23	15.1	1.5	7.2	chr8	124372428	124372495	(20766141)	+	G-rich	Low_complexity	1	69	(0)	3973578
19	15.8	1.8	5.4	chr8	124372641	124372695	(20765941)	+	(GCAGCC)n	Simple_repeat	1	56	(0)	3973579
287	25.8	9.3	4.0	chr8	127411060	127411160	(17727476)	+	MER91C	DNA/hAT-Tip100	1	107	(33)	3979300
2076	19.0	2.3	7.4	chr8	129829510	129829770	(15308866)	+	MER31A	LTR/ERV1	1	244	(241)	3983794
2479	10.8	1.4	1.4	chr8	129829771	129830125	(15308511)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3983795
12045	8.4	3.7	0.1	chr8	129830126	129831649	(15306987)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3983795
2405	11.5	1.7	0.8	chr8	129831650	129832001	(15306635)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3983795
2076	19.0	2.3	7.4	chr8	129832002	129832249	(15306387)	+	MER31A	LTR/ERV1	245	483	(2)	3983794
13	13.1	0.0	0.0	chr8	130016424	130016448	(15122188)	+	(GCC)n	Simple_repeat	1	25	(0)	3984185
20	10.1	0.0	0.0	chr8	130016501	130016532	(15122104)	+	(GCA)n	Simple_repeat	1	32	(0)	3984186
312	22.3	6.8	2.6	chr8	130016850	130016982	(15121654)	C	MIR3	SINE/MIR	(95)	173	29	3984187
356	30.2	1.4	8.6	chr8	130046451	130046602	(15092034)	C	MIRb	SINE/MIR	(18)	250	110	3984273
2367	13.3	1.1	0.8	chr8	130593131	130593493	(14545143)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3985398
192	21.1	13.5	9.2	chr8	132996032	132996151	(12142485)	+	MIRc	SINE/MIR	4	129	(139)	3989577
234	27.0	5.7	4.8	chr8	133375365	133375469	(11763167)	+	L2b	LINE/L2	3233	3338	(37)	3990317
11	3.1	14.3	2.5	chr8	133375574	133375608	(11763028)	+	(GAAGGCT)n	Simple_repeat	1	40	(0)	3990318
325	30.6	20.9	2.9	chr8	133375938	133376112	(11762524)	C	MIRb	SINE/MIR	(45)	223	9	3990319
2044	14.9	3.7	3.4	chr8	133671950	133672303	(11466333)	+	THE1B	LTR/ERVL-MaLR	1	355	(9)	3990968
2592	10.8	0.6	0.0	chr8	138020692	138021044	(7117592)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3998039
2618	8.5	0.6	2.5	chr8	138541885	138542246	(6596390)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3998893
2577	10.1	1.7	0.3	chr8	139249114	139249462	(5889174)	+	THE1A	LTR/ERVL-MaLR	2	355	(0)	4000048
11599	7.9	3.9	0.8	chr8	139249463	139250993	(5887643)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	4000048
889	31.6	6.0	5.8	chr8	139924998	139925465	(5213171)	+	L1MEf	LINE/L1	3	471	(5729)	4001084
2384	10.6	0.0	0.0	chr8	139925466	139925768	(5212868)	+	AluSz	SINE/Alu	1	303	(9)	4001085
5218	8.5	2.2	1.5	chr8	140475957	140476360	(4662276)	+	L1PA10	LINE/L1	5384	5792	(376)	4002033
2464	11.1	1.1	0.3	chr8	140476361	140476712	(4661924)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4002034
12116	8.4	0.4	2.4	chr8	140476713	140477899	(4660737)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	426	4002034
1371	15.2	15.9	0.4	chr8	140565799	140566048	(4572588)	+	AluJo	SINE/Alu	2	297	(15)	4002182
1789	19.2	3.9	9.4	chr8	140566049	140566087	(4572549)	+	Tigger2a	DNA/TcMar-Tigger	374	403	(31)	4002178
1911	13.6	8.7	2.1	chr8	140566088	140566418	(4572218)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4002183
1789	19.2	3.9	9.4	chr8	140566419	140566454	(4572182)	+	Tigger2a	DNA/TcMar-Tigger	404	434	(0)	4002178
16	28.8	0.0	0.0	chr8	141128444	141128494	(4010142)	+	(CGCCC)n	Simple_repeat	1	51	(0)	4003235
21	13.7	0.0	7.1	chr8	141128535	141128590	(4010046)	+	(GCCCC)n	Simple_repeat	1	56	(0)	4003236
13	21.5	3.4	4.9	chr8	141128648	141128706	(4009930)	+	G-rich	Low_complexity	1	61	(0)	4003237
10740	2.4	0.4	16.2	chr8	141201549	141203194	(3935442)	C	SVA_D	Retroposon/SVA	(0)	1386	2	4003338
35	25.7	2.4	3.1	chr8	142449674	142449800	(2688836)	+	(GCG)n	Simple_repeat	1	130	(0)	4004915
12	14.6	0.0	5.9	chr8	142449790	142449823	(2688813)	+	(CGGCC)n	Simple_repeat	1	34	(0)	4004916
15	31.1	0.0	1.6	chr8	142727285	142727345	(2411291)	+	(CGCCGC)n	Simple_repeat	1	61	(0)	4005232
1276	12.6	5.3	1.4	chr8	142857945	142858162	(2280474)	C	THE1D	LTR/ERVL-MaLR	(0)	381	155	4005387
2514	5.7	0.3	0.0	chr8	143623878	143624174	(1514462)	C	AluYk3	SINE/Alu	(13)	298	1	4006401
1450	18.0	1.1	5.2	chr8	143624175	143624285	(1514351)	C	AluJo	SINE/Alu	(205)	107	1	4006400
525	17.8	1.8	0.0	chr8	143624286	143624375	(1514261)	C	LTR24C	LTR/ERV1	(26)	609	446	4006402
2244	11.8	6.9	0.3	chr8	143624376	143624715	(1513921)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4006403
2703	13.1	5.7	3.9	chr8	143624716	143625150	(1513486)	C	LTR24C	LTR/ERV1	(110)	525	80	4006402
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
226	12.1	0.0	0.0	chr8	143669745	143669777	(1468859)	+	Alu	SINE/Alu	2	34	(99)	4006490
303	13.6	4.3	2.9	chr8	143669777	143669844	(1468792)	C	MSTA	LTR/ERVL-MaLR	(175)	253	185	4006491
355	23.9	1.9	16.8	chr8	143902309	143902428	(1236208)	C	Zaphod2	DNA/hAT-Tip100	(2260)	1264	1167	4006821
12	10.6	0.0	10.5	chr8	143902804	143902841	(1235795)	+	(CACC)n	Simple_repeat	1	38	(0)	4006826
23	2.8	5.6	0.0	chr8	143973562	143973597	(1165039)	+	(CCGCCC)n	Simple_repeat	1	38	(0)	4006902
13	6.4	12.1	0.0	chr8	143973610	143973642	(1164994)	+	(GGCCGG)n	Simple_repeat	1	37	(0)	4006903
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
293	19.1	0.0	0.0	chr8	144126225	144126287	(1012349)	+	L1MC4	LINE/L1	7955	8017	(25)	4007142
953	15.2	1.8	2.4	chr8	144126289	144126452	(1012184)	C	AluJb	SINE/Alu	(20)	292	130	4007146
13	23.2	0.0	5.9	chr8	144530282	144530332	(608304)	+	G-rich	Low_complexity	1	51	(0)	4007708
2507	8.2	6.5	0.0	chr8	144664536	144664865	(473771)	+	THE1A	LTR/ERVL-MaLR	3	355	(0)	4007892
11886	9.4	1.6	0.1	chr8	144664866	144666422	(472214)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	4007892
17	28.4	2.3	3.4	chr9	969512	969597	(137425120)	+	(GGCTGC)n	Simple_repeat	1	88	(0)	4010075
16	23.2	1.9	1.9	chr9	976573	976624	(137418093)	+	G-rich	Low_complexity	1	53	(0)	4010079
1140	17.4	0.6	0.0	chr9	2148641	2148807	(136245910)	C	AluJb	SINE/Alu	(143)	169	2	4011720
2571	10.5	0.8	2.5	chr9	2149053	2149235	(136245482)	C	THE1A	LTR/ERVL-MaLR	(0)	355	174	4011721
2314	11.8	1.3	1.0	chr9	2149236	2149541	(136245176)	+	AluSx1	SINE/Alu	1	307	(5)	4011722
12	23.4	4.6	4.4	chr9	2621834	2621898	(135772819)	+	(CTCTCCG)n	Simple_repeat	1	68	(0)	4012376
25	24.1	4.8	0.0	chr9	2621899	2621913	(135772804)	+	(CTCCT)n	Simple_repeat	4	87	(0)	4012377
13	22.0	9.3	3.2	chr9	2622027	2622112	(135772605)	+	(CCTCCTT)n	Simple_repeat	1	94	(0)	4012378
2079	11.9	5.9	6.1	chr9	2794299	2794674	(135600043)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4012664
1412	27.8	4.5	1.6	chr9	3372035	3372487	(135022230)	+	LTR16C	LTR/ERVL	19	485	(4)	4013507
2154	10.3	0.0	10.9	chr9	3372536	3372885	(135021832)	C	AluSx1	SINE/Alu	(0)	312	1	4013508
34	9.2	0.0	0.0	chr9	3525927	3526019	(134868698)	+	(AG)n	Simple_repeat	1	93	(0)	4013735
14	21.1	3.3	4.8	chr9	4662147	4662206	(133732511)	+	(TCACC)n	Simple_repeat	1	62	(0)	4015435
12	13.7	0.0	0.0	chr9	4662430	4662453	(133732264)	+	(AGC)n	Simple_repeat	1	24	(0)	4015436
2241	12.1	2.0	0.3	chr9	8689369	8689717	(129705000)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4021392
32	31.4	3.9	0.6	chr9	8857657	8857810	(129536907)	+	(GCC)n	Simple_repeat	1	160	(0)	4021665
22	22.8	1.6	1.5	chr9	8857907	8857915	(129536802)	+	(TCCCCC)n	Simple_repeat	1	64	(0)	4021666
24	13.2	1.9	3.6	chr9	8857916	8857969	(129536748)	+	(CCT)n	Simple_repeat	1	55	(0)	4021667
11	22.9	1.7	6.8	chr9	8858018	8858075	(129536642)	+	(CTCCCG)n	Simple_repeat	1	59	(0)	4021668
34	5.3	0.0	0.0	chr9	8858086	8858125	(129536592)	+	(CTC)n	Simple_repeat	1	40	(0)	4021669
27	20.8	1.8	0.0	chr9	14322297	14322353	(124072364)	+	(GT)n	Simple_repeat	1	58	(0)	4028795
12	24.1	0.0	0.0	chr9	14322573	14322606	(124072111)	+	(CGCCC)n	Simple_repeat	1	34	(0)	4028796
2399	12.7	2.5	0.0	chr9	14394324	14394678	(124000039)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4028915
351	32.7	1.9	0.0	chr9	14394738	14394838	(123999879)	+	MIRc	SINE/MIR	45	147	(121)	4028916
1772	15.8	0.0	4.0	chr9	14598756	14599058	(123795659)	C	AluJb	SINE/Alu	(17)	295	5	4029211
244	10.0	2.4	0.0	chr9	14599105	14599144	(123795573)	+	THE1A	LTR/ERVL-MaLR	195	235	(120)	4029212
4473	11.2	0.0	0.5	chr9	14599149	14599787	(123794930)	+	L1PA7	LINE/L1	4	639	(5822)	4029213
617	33.6	4.6	7.9	chr9	15258075	15258478	(123136239)	C	L2b	LINE/L2	(616)	2803	2414	4030169
17	22.0	5.0	1.6	chr9	15510935	15510994	(122883723)	+	(CCG)n	Simple_repeat	1	63	(0)	4030658
3010	26.8	6.9	7.3	chr9	15862228	15863448	(122531269)	C	L1MB1	LINE/L1	(4675)	1628	413	4031163
303	20.3	1.4	1.4	chr9	15863446	15863515	(122531202)	C	L1M4	LINE/L1	(4727)	1919	1850	4031168
1731	21.2	6.0	7.6	chr9	15863548	15864058	(122530659)	C	L1M4	LINE/L1	(6174)	1343	842	4031168
336	27.7	1.7	8.7	chr9	16154644	16154896	(122239821)	C	UCON51	LTR?	(14)	236	2	4031534
2465	10.7	1.8	5.8	chr9	16971901	16971957	(121422760)	+	THE1D	LTR/ERVL-MaLR	1	52	(329)	4032701
2800	9.6	0.6	0.0	chr9	16971958	16972310	(121422407)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4032702
2465	10.7	1.8	5.8	chr9	16972311	16972423	(121422294)	+	THE1D	LTR/ERVL-MaLR	53	164	(217)	4032701
2421	10.7	0.3	1.3	chr9	16972424	16972733	(121421984)	C	AluSx3	SINE/Alu	(4)	307	1	4032703
15	14.9	2.6	2.5	chr9	17579384	17579422	(120815295)	+	(GCGCC)n	Simple_repeat	1	40	(0)	4033526
632	27.6	11.9	8.2	chr9	17692655	17692730	(120701987)	+	L1ME4b	LINE/L1	777	840	(52)	4033669
2566	8.9	2.0	0.3	chr9	17692731	17693079	(120701638)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4033671
632	27.6	11.9	8.2	chr9	17693080	17693131	(120701586)	+	L1ME4b	LINE/L1	841	888	(4)	4033669
2540	9.3	0.3	2.2	chr9	20584444	20584805	(117809912)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4038091
5478	15.4	2.7	3.3	chr9	20584806	20585055	(117809662)	C	L1MC2	LINE/L1	(479)	5865	5620	4038090
1703	13.1	6.0	10.3	chr9	20590330	20590728	(117803989)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4038099
1535	21.5	0.0	4.5	chr9	20590738	20591049	(117803668)	C	AluJr	SINE/Alu	(14)	298	1	4038100
2172	13.1	1.4	0.8	chr9	21624013	21624365	(116770352)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4039464
14	20.8	1.2	10.8	chr9	21974812	21974893	(116419824)	+	(CCG)n	Simple_repeat	1	83	(0)	4039935
23	20.5	4.4	4.2	chr9	21994457	21994547	(116400170)	+	(CCGCAC)n	Simple_repeat	1	95	(0)	4039969
581	25.0	5.0	1.7	chr9	22058560	22058734	(116335983)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	231	4040058
2339	9.7	2.6	0.3	chr9	22058743	22059084	(116335633)	C	THE1A	LTR/ERVL-MaLR	(0)	355	6	4040059
11620	10.0	0.9	0.0	chr9	22059090	22060655	(116334062)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	4040059
2655	10.8	0.0	0.3	chr9	26561425	26561787	(111832930)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	4045817
803	27.2	7.5	6.6	chr9	30819680	30820101	(107574616)	C	L1ME2	LINE/L1	(138)	6026	5601	4051646
2009	6.9	18.6	0.0	chr9	30820104	30820392	(107574325)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4051649
10804	10.9	2.8	0.5	chr9	30820393	30821929	(107572788)	+	THE1A-int	LTR/ERVL-MaLR	1	1574	(6)	4051649
11028	10.9	1.4	0.1	chr9	31120791	31122349	(107272368)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	4051998
2211	11.3	2.8	6.8	chr9	31122350	31122719	(107271998)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4051998
2814	8.5	0.3	0.6	chr9	32459941	32460296	(105934421)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4053687
554	19.6	11.4	4.7	chr9	33523236	33523406	(104871311)	C	L1MA9	LINE/L1	(3)	6309	6126	4055613
11	22.1	5.4	3.4	chr9	33676731	33676786	(104717931)	+	(TGGCTC)n	Simple_repeat	1	59	(0)	4055806
30	0.0	0.0	0.0	chr9	33677010	33677037	(104717680)	+	(GCC)n	Simple_repeat	1	28	(0)	4055807
15	12.0	0.0	0.0	chr9	33677312	33677338	(104717379)	+	(CGC)n	Simple_repeat	1	27	(0)	4055808
15	0.0	0.0	0.0	chr9	33677386	33677404	(104717313)	+	(GCC)n	Simple_repeat	1	19	(0)	4055809
3051	26.7	5.9	8.1	chr9	33677515	33678799	(104715918)	C	L1M4	LINE/L1	(1344)	4802	3485	4055810
12	8.8	13.5	0.0	chr9	33791928	33791964	(104602753)	+	G-rich	Low_complexity	1	42	(0)	4055988
12	5.6	0.0	0.0	chr9	34048852	34048870	(104345847)	+	(CCG)n	Simple_repeat	1	19	(0)	4056570
232	27.7	0.0	0.0	chr9	34074515	34074561	(104320156)	C	L2c	LINE/L2	(232)	3155	3109	4056654
247	22.4	0.0	5.6	chr9	34074598	34074658	(104320059)	C	L1ME3G	LINE/L1	(297)	627	569	4056655
22	23.6	1.4	2.7	chr9	34958018	34958090	(103436627)	+	(GCCGCCC)n	Simple_repeat	1	74	(0)	4058166
34	0.0	0.0	0.0	chr9	34958227	34958257	(103436460)	+	(CGC)n	Simple_repeat	1	31	(0)	4058167
21	9.5	0.0	0.0	chr9	35489590	35489623	(102905094)	+	(CCCAC)n	Simple_repeat	1	34	(0)	4058938
20	3.8	0.0	0.0	chr9	35490117	35490143	(102904574)	+	(CGC)n	Simple_repeat	1	27	(0)	4058939
1792	21.2	4.0	3.1	chr9	36025390	36026118	(102368599)	+	L1ME1	LINE/L1	4911	5646	(518)	4059805
321	17.0	0.0	0.0	chr9	36026120	36026172	(102368545)	+	MER74B	LTR/ERVL	1	53	(569)	4059806
1169	25.4	5.6	2.3	chr9	36026208	36026605	(102368112)	+	MER74B	LTR/ERVL	211	622	(0)	4059806
34	16.9	0.0	0.0	chr9	36400879	36400944	(101993773)	+	(GCCCC)n	Simple_repeat	1	66	(0)	4060561
19	17.5	2.7	7.8	chr9	37027606	37027680	(101367037)	+	(GCC)n	Simple_repeat	1	77	(0)	4061903
1219	8.5	0.0	2.4	chr9	37592779	37592942	(100801775)	+	AluSx	SINE/Alu	125	284	(28)	4062992
12495	8.1	0.1	0.0	chr9	37672984	37674561	(100720156)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	4063165
2678	9.3	0.6	0.0	chr9	37674562	37674914	(100719803)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4063165
856	25.2	0.4	7.5	chr9	37674915	37674947	(100719770)	C	MIR	SINE/MIR	(205)	57	30	4063164
304	31.8	6.5	8.1	chr9	37674982	37675144	(100719573)	C	L2c	LINE/L2	(556)	2863	2707	4063161
296	32.6	5.7	9.8	chr9	38023168	38023404	(100371313)	+	MIRc	SINE/MIR	1	229	(39)	4063800
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
8104	6.6	0.4	2.1	chr9	41358049	41359305	(97035412)	+	SST1	Satellite/centr	1	1235	(327)	4068508
2236	14.4	0.0	2.2	chr9	41704279	41704641	(96690076)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4068954
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
734	9.3	2.5	2.5	chr9	62802318	62802438	(75592279)	C	5S	rRNA	(0)	121	1	4073675
18600	10.6	1.7	6.0	chr9	62840284	62843326	(75551391)	C	L1PBa	LINE/L1	(927)	5198	2140	4073706
415	28.0	2.0	1.0	chr9	63817237	63817537	(74577180)	+	LSAU	Satellite	1	303	(172)	4074767
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
16	11.7	0.0	0.0	chr9	64774844	64774871	(73619846)	+	(GCG)n	Simple_repeat	1	28	(0)	4075710
2025	27.7	6.4	7.4	chr9	65386109	65387421	(73007296)	+	SST1	Satellite/centr	262	1560	(3)	4076186
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
2184	13.4	1.4	1.1	chr9	68987616	68987969	(69406748)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4080747
14	10.0	6.2	0.0	chr9	69035827	69035858	(69358859)	+	(ACCCAG)n	Simple_repeat	1	34	(0)	4080839
23	19.6	4.7	0.0	chr9	69035970	69036033	(69358684)	+	(GCCGCAC)n	Simple_repeat	1	67	(0)	4080840
18	4.7	0.0	0.0	chr9	69760011	69760032	(68634685)	+	(CG)n	Simple_repeat	1	22	(0)	4082050
16	10.7	3.3	0.0	chr9	69760047	69760076	(68634641)	+	(GCC)n	Simple_repeat	1	31	(0)	4082051
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
253	26.1	0.0	0.0	chr9	70038639	70038703	(68356014)	+	MER102a	DNA/hAT-Charlie	90	154	(176)	4082516
21	12.8	5.7	1.8	chr9	70413453	70413505	(67981212)	+	(GCGCG)n	Simple_repeat	1	56	(0)	4083103
12	25.8	0.0	0.0	chr9	71446731	71446767	(66947950)	+	(CCGGCT)n	Simple_repeat	1	37	(0)	4084666
12	29.1	4.0	2.6	chr9	71446942	71447015	(66947702)	+	(GCCTCC)n	Simple_repeat	1	77	(0)	4084667
2024	15.7	3.6	2.5	chr9	73228337	73228696	(65166021)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4087792
17	16.4	0.0	0.0	chr9	75028093	75028126	(63366591)	+	(GCC)n	Simple_repeat	1	34	(0)	4090399
1982	17.4	0.0	0.3	chr9	75084508	75084805	(63309912)	+	AluJb	SINE/Alu	2	298	(14)	4090512
2755	7.1	1.1	0.0	chr9	75619826	75620176	(62774541)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4091252
20180	15.4	4.4	1.4	chr9	75620177	75626283	(62768434)	C	L1PREC2	LINE/L1	(1819)	6322	14	4091251
12	15.8	0.0	3.3	chr9	75890707	75890736	(62503981)	+	(GAGC)n	Simple_repeat	1	30	(0)	4091628
13	8.5	4.0	0.0	chr9	75891146	75891170	(62503547)	+	(AGCG)n	Simple_repeat	1	26	(0)	4091629
18	17.2	0.0	5.9	chr9	76394543	76394593	(62000124)	+	(GCCCC)n	Simple_repeat	1	51	(0)	4092455
200	33.1	0.0	0.0	chr9	76394868	76394942	(61999775)	+	L2c	LINE/L2	3109	3183	(192)	4092456
2326	9.0	1.9	1.3	chr9	76454099	76454409	(61940308)	+	AluSq	SINE/Alu	1	313	(0)	4092583
2033	23.1	4.4	10.3	chr9	76454410	76454518	(61940199)	C	MER92B	LTR/ERV1	(188)	448	360	4092582
2085	14.2	4.2	6.7	chr9	76454519	76454834	(61939883)	+	THE1D	LTR/ERVL-MaLR	1	319	(62)	4092584
2512	7.7	0.3	0.6	chr9	76454835	76455145	(61939572)	C	AluSg	SINE/Alu	(0)	310	1	4092585
1796	26.5	14.7	3.3	chr9	77112404	77113763	(61280954)	+	L1MC4	LINE/L1	6746	8242	(1062)	4093772
1579	10.9	0.4	0.0	chr9	77113764	77114011	(61280706)	+	L1MA4	LINE/L1	6046	6294	(6)	4093773
36	28.8	4.7	2.5	chr9	78031679	78031871	(60362846)	+	(GCCCCC)n	Simple_repeat	1	202	(0)	4095147
23	18.4	3.1	3.0	chr9	78031965	78032029	(60362688)	+	GA-rich	Low_complexity	1	67	(0)	4095148
24	21.3	2.5	3.6	chr9	78032030	78032043	(60362674)	+	G-rich	Low_complexity	3	83	(0)	4095149
2393	7.7	0.0	2.6	chr9	78235587	78235899	(60158818)	C	AluSq2	SINE/Alu	(8)	305	1	4095457
320	31.6	6.0	4.6	chr9	78236708	78236903	(60157814)	+	MIRb	SINE/MIR	70	268	(0)	4095458
1318	31.8	7.6	5.2	chr9	79221230	79221591	(59173126)	+	LTR78	LTR/ERV1	435	814	(490)	4096916
2266	12.8	3.3	2.8	chr9	79221592	79221953	(59172764)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4096917
1318	31.8	7.6	5.2	chr9	79221954	79222438	(59172279)	+	LTR78	LTR/ERV1	815	1304	(0)	4096916
26	20.9	1.8	0.0	chr9	79257119	79257174	(59137543)	+	(CT)n	Simple_repeat	1	57	(0)	4096976
2562	10.8	0.8	0.8	chr9	79537744	79538107	(58856610)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4097407
19	7.2	0.0	0.0	chr9	79571362	79571390	(58823327)	+	(CCA)n	Simple_repeat	1	29	(0)	4097445
14	10.8	3.1	3.0	chr9	79571404	79571435	(58823282)	+	(GCA)n	Simple_repeat	1	33	(0)	4097446
1640	22.5	3.0	2.2	chr9	79686382	79686836	(58707881)	+	MLT1C	LTR/ERVL-MaLR	7	465	(2)	4097598
862	28.9	6.3	7.1	chr9	79856922	79857626	(58537091)	C	L2a	LINE/L2	(0)	3426	2735	4097846
480	31.3	2.2	3.8	chr9	79932636	79932821	(58461896)	C	MIRb	SINE/MIR	(69)	199	17	4097953
17	12.0	3.9	5.7	chr9	79932869	79932919	(58461798)	+	(TTTTTG)n	Simple_repeat	1	53	(0)	4097954
13	16.2	10.4	0.0	chr9	81689119	81689166	(56705551)	+	(CCTT)n	Simple_repeat	1	53	(0)	4100304
2020	14.5	4.4	2.8	chr9	81956551	81956904	(56437813)	C	THE1B	LTR/ERVL-MaLR	(2)	362	3	4100828
2398	11.7	1.1	0.3	chr9	82442915	82443266	(55951451)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4101482
2850	6.5	0.0	0.6	chr9	83455291	83455647	(54939070)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4102933
1402	19.8	3.2	2.7	chr9	83921775	83922112	(54472605)	C	L1MB5	LINE/L1	(8)	6166	5827	4103728
2038	15.6	3.5	0.0	chr9	84438808	84439140	(53955577)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	4104701
31	14.4	1.6	1.6	chr9	85741887	85741949	(52652768)	+	(CGG)n	Simple_repeat	1	64	(0)	4106656
20	14.3	2.0	3.9	chr9	86354546	86354595	(52040122)	+	(CGCCC)n	Simple_repeat	1	51	(0)	4107753
2340	13.8	2.2	0.0	chr9	86727858	86728213	(51666504)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4108361
13	15.1	6.2	3.9	chr9	86946296	86946343	(51448374)	+	(CGCCGG)n	Simple_repeat	1	51	(0)	4108701
16	20.4	7.0	2.6	chr9	86946660	86946730	(51447987)	+	(CAGCCCAG)n	Simple_repeat	1	76	(0)	4108702
15	28.6	3.1	1.5	chr9	86946736	86946800	(51447917)	+	(CCG)n	Simple_repeat	1	67	(0)	4108703
13	26.1	0.0	0.0	chr9	86946800	86946840	(51447877)	+	G-rich	Low_complexity	1	41	(0)	4108704
2497	13.2	1.9	0.3	chr9	87059146	87059503	(51335214)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4108864
2692	12.8	0.3	0.3	chr9	87079816	87080177	(51314540)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	4108910
2826	5.7	0.6	0.3	chr9	88350465	88350815	(50043902)	C	THE1A	LTR/ERVL-MaLR	(0)	355	4	4110981
865	26.8	12.7	3.1	chr9	88776422	88776834	(49617883)	+	MLT1F-int	LTR/ERVL-MaLR	1032	1489	(0)	4111704
1040	15.4	5.5	0.0	chr9	88777087	88777242	(49617475)	+	AluJr	SINE/Alu	137	301	(11)	4111705
2134	11.0	1.7	1.0	chr9	89944794	89945085	(48449632)	C	AluSq2	SINE/Alu	(17)	296	3	4113173
2595	10.8	0.8	0.3	chr9	90963030	90963391	(47431326)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4114508
27	3.5	0.0	0.0	chr9	92764802	92764831	(45629886)	+	(GCC)n	Simple_repeat	1	30	(0)	4117178
15	23.4	3.4	3.3	chr9	92764841	92764899	(45629818)	+	(CGCC)n	Simple_repeat	1	61	(0)	4117179
13	7.6	7.1	0.0	chr9	93451640	93451667	(44943050)	+	(GCCCC)n	Simple_repeat	1	30	(0)	4118196
39	21.8	3.0	4.3	chr9	93451782	93451915	(44942802)	+	(CGCC)n	Simple_repeat	1	138	(0)	4118197
2645	9.0	0.0	0.0	chr9	93982639	93982993	(44411724)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4118862
11976	11.9	1.7	1.1	chr9	93982994	93984734	(44409983)	+	L1PA16	LINE/L1	4418	6157	(9)	4118860
11	21.1	0.0	2.9	chr9	95510778	95510812	(42883905)	+	G-rich	Low_complexity	1	35	(0)	4121309
23	29.0	3.3	5.1	chr9	95511220	95511269	(42883448)	+	(CTCC)n	Simple_repeat	1	65	(92)	4121310
12	14.6	0.0	5.9	chr9	95511270	95511303	(42883414)	+	(CCTTCG)n	Simple_repeat	1	34	(0)	4121311
18	3.3	6.5	0.0	chr9	96654925	96654955	(41739762)	+	(CCTCGC)n	Simple_repeat	1	33	(0)	4123268
23	24.9	1.5	0.0	chr9	96655321	96655386	(41739331)	+	G-rich	Low_complexity	1	67	(0)	4123269
459	28.6	6.9	0.6	chr9	97632719	97632880	(40761837)	C	L2a	LINE/L2	(763)	2656	2484	4124835
308	28.4	11.8	9.7	chr9	97696884	97697140	(40697577)	C	L1M4b	LINE/L1	(6203)	664	402	4124935
2222	6.9	0.3	0.3	chr9	98065669	98065960	(40328757)	+	THE1A	LTR/ERVL-MaLR	1	292	(63)	4125722
276	26.5	2.9	3.8	chr9	98065966	98066071	(40328646)	C	MARNA	DNA/TcMar-Mariner	(468)	118	14	4125723
245	25.4	12.4	2.1	chr9	98192315	98192467	(40202250)	C	MIR3	SINE/MIR	(76)	192	17	4126033
13	18.9	0.0	0.0	chr9	98192569	98192598	(40202119)	+	(GCG)n	Simple_repeat	1	30	(0)	4126034
13	19.2	3.8	5.5	chr9	98192622	98192674	(40202043)	+	(CGC)n	Simple_repeat	1	55	(0)	4126035
12	7.2	10.3	0.0	chr9	98192676	98192704	(40202013)	+	(GGCGG)n	Simple_repeat	1	32	(0)	4126036
325	33.3	2.6	2.4	chr9	98192889	98193096	(40201621)	+	MIR	SINE/MIR	40	246	(22)	4126037
28	27.1	1.5	5.9	chr9	98708572	98708705	(39686012)	+	(GCG)n	Simple_repeat	1	136	(0)	4127045
22	6.5	0.0	0.0	chr9	98708891	98708922	(39685795)	+	(CGG)n	Simple_repeat	1	32	(0)	4127046
13	10.8	3.1	3.0	chr9	98709045	98709076	(39685641)	+	(CCGCC)n	Simple_repeat	1	33	(0)	4127047
15	9.3	2.6	5.1	chr9	98709319	98709356	(39685361)	+	(CCGCTGC)n	Simple_repeat	1	39	(0)	4127048
231	30.5	9.0	3.4	chr9	98722642	98722787	(39671930)	+	L2c	LINE/L2	2976	3130	(257)	4127076
596	30.9	1.9	1.3	chr9	98722961	98723114	(39671603)	C	L1M5	LINE/L1	(425)	5769	5615	4127077
230	26.8	9.5	2.5	chr9	98807401	98807537	(39587180)	C	MIRb	SINE/MIR	(8)	260	115	4127248
21	22.1	0.0	6.5	chr9	98807542	98807618	(39587099)	+	G-rich	Low_complexity	1	77	(0)	4127249
15	25.5	1.5	4.5	chr9	98807788	98807853	(39586864)	+	(GGCCGG)n	Simple_repeat	1	67	(0)	4127250
13	14.5	7.9	0.0	chr9	98807943	98807980	(39586737)	+	(TGCAGC)n	Simple_repeat	1	41	(0)	4127251
11	19.1	4.3	8.2	chr9	98943838	98943907	(39450810)	+	G-rich	Low_complexity	1	73	(0)	4127549
14	8.4	0.0	3.7	chr9	98943914	98943940	(39450777)	+	(CCG)n	Simple_repeat	1	27	(0)	4127550
319	33.7	7.9	9.7	chr9	99900539	99900764	(38493953)	C	L2c	LINE/L2	(1)	3386	3157	4129269
2405	10.8	0.8	0.8	chr9	99900765	99901118	(38493599)	C	THE1A	LTR/ERVL-MaLR	(1)	354	1	4129270
12	28.0	0.0	0.0	chr9	100473677	100473715	(37921002)	+	(GGC)n	Simple_repeat	1	39	(0)	4130227
16	14.3	0.0	6.8	chr9	100473999	100474042	(37920675)	+	G-rich	Low_complexity	1	44	(0)	4130228
30	23.5	0.0	0.0	chr9	101028886	101028950	(37365767)	+	(CA)n	Simple_repeat	1	65	(0)	4131062
1756	14.4	8.2	2.5	chr9	102866586	102866941	(35527776)	C	THE1D	LTR/ERVL-MaLR	(3)	378	1	4133618
8816	18.5	3.0	2.2	chr9	103147151	103149188	(35245529)	C	L1M1	LINE/L1	(2159)	5403	3331	4133979
2453	10.8	0.6	0.0	chr9	103149191	103149543	(35245174)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4133981
10784	11.3	0.8	0.9	chr9	103149544	103151125	(35243592)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	4133981
2307	7.5	0.3	2.6	chr9	104764541	104764845	(33629872)	C	AluSx3	SINE/Alu	(13)	298	1	4136224
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
15	22.3	4.4	4.2	chr9	105244915	105244982	(33149735)	+	(CCCG)n	Simple_repeat	1	71	(0)	4137224
13	7.2	3.0	5.9	chr9	106862321	106862353	(31532364)	+	G-rich	Low_complexity	1	34	(0)	4139691
52	23.1	0.8	0.0	chr9	106862510	106862631	(31532086)	+	(CTC)n	Simple_repeat	1	123	(0)	4139692
1845	7.9	2.6	0.0	chr9	108267010	108267274	(30127443)	+	THE1A-int	LTR/ERVL-MaLR	1309	1580	(0)	4142465
2279	11.0	2.8	0.9	chr9	108267275	108267622	(30127095)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4142465
2156	12.2	5.0	5.0	chr9	108558342	108558720	(29835997)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	4142901
18	4.8	0.0	0.0	chr9	108847616	108847637	(29547080)	+	(T)n	Simple_repeat	1	22	(0)	4143399
2522	10.5	0.3	2.5	chr9	108847668	108848029	(29546688)	C	THE1A	LTR/ERVL-MaLR	(1)	354	1	4143400
13	23.1	0.0	0.0	chr9	109320358	109320393	(29074324)	+	(CCCCG)n	Simple_repeat	1	36	(0)	4144248
32	0.0	0.0	0.0	chr9	109320481	109320510	(29074207)	+	(CGCTGC)n	Simple_repeat	1	30	(0)	4144249
32	3.0	0.0	0.0	chr9	109321009	109321042	(29073675)	+	(GCC)n	Simple_repeat	1	34	(0)	4144250
12	28.1	6.2	0.0	chr9	109779952	109780015	(28614702)	+	(GCGC)n	Simple_repeat	1	68	(0)	4145117
16	25.9	2.9	2.9	chr9	111483551	111483618	(26911099)	+	G-rich	Low_complexity	1	70	(0)	4147932
13	27.4	0.0	6.2	chr9	111484194	111484257	(26910460)	+	G-rich	Low_complexity	1	64	(0)	4147933
16	26.6	0.0	2.0	chr9	111631460	111631510	(26763207)	+	(GCT)n	Simple_repeat	1	51	(0)	4148269
867	32.6	8.6	8.1	chr9	111950513	111951152	(26443565)	+	ERVL-B4-int	LTR/ERVL	1297	1930	(3784)	4148856
13	18.9	4.5	2.2	chr9	112333142	112333185	(26061532)	+	(CCGCGGA)n	Simple_repeat	1	46	(0)	4149606
35	24.5	3.9	2.2	chr9	112333644	112333773	(26060944)	+	(CGCCCC)n	Simple_repeat	1	135	(0)	4149607
2409	12.7	0.8	2.4	chr9	112369775	112370144	(26024573)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4149696
345	16.4	0.0	3.5	chr9	112370145	112370201	(26024516)	C	L1M4c	LINE/L1	(6975)	55	1	4149681
3235	18.3	3.0	2.4	chr9	112370194	112370259	(26024458)	C	L1M4	LINE/L1	(1361)	4785	4728	4149697
39	2.7	0.0	0.0	chr9	112487937	112487974	(25906743)	+	(GT)n	Simple_repeat	1	38	(0)	4149958
24	18.9	4.4	1.4	chr9	112750624	112750691	(25644026)	+	(CCTC)n	Simple_repeat	1	71	(0)	4150443
18	0.0	0.0	0.0	chr9	113150983	113151004	(25243713)	+	(GCG)n	Simple_repeat	1	22	(0)	4151083
400	29.3	3.1	0.0	chr9	113620872	113621028	(24773689)	C	MIR3	SINE/MIR	(8)	200	39	4152032
718	16.8	10.1	0.0	chr9	113621055	113621215	(24773502)	C	MER20	DNA/hAT-Charlie	(2)	217	39	4152033
11125	8.7	1.5	8.0	chr9	114601322	114602006	(23792711)	C	THE1A-int	LTR/ERVL-MaLR	(964)	616	1	4154023
2747	6.9	1.7	0.3	chr9	114602007	114602356	(23792361)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4154023
540	22.2	15.5	1.1	chr9	114602357	114602543	(23792174)	+	L2b	LINE/L2	2234	2452	(967)	4154019
16	26.2	1.3	5.3	chr9	114611397	114611471	(23783246)	+	G-rich	Low_complexity	1	76	(0)	4154052
26	0.0	0.0	0.0	chr9	114611534	114611558	(23783159)	+	(GGC)n	Simple_repeat	1	25	(0)	4154053
51	29.7	0.0	1.7	chr9	115402875	115403006	(22991711)	+	(ATAT)n	Simple_repeat	1	131	(0)	4155545
2293	11.9	0.8	1.7	chr9	115403007	115403364	(22991353)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4155546
2264	12.9	0.8	0.8	chr9	115453818	115454169	(22940548)	+	THE1A	LTR/ERVL-MaLR	1	352	(3)	4155625
12562	14.2	4.2	3.0	chr9	115454170	115455127	(22939590)	C	Tigger1	DNA/TcMar-Tigger	(1413)	1005	13	4155622
12	5.6	0.0	0.0	chr9	120713807	120713825	(17680892)	+	(GCT)n	Simple_repeat	1	19	(0)	4165547
28	3.3	0.0	0.0	chr9	120714260	120714290	(17680427)	+	(GGC)n	Simple_repeat	1	31	(0)	4165548
12	24.4	0.0	0.0	chr9	120714352	120714385	(17680332)	+	(CAGT)n	Simple_repeat	1	34	(0)	4165549
20	22.7	0.0	0.0	chr9	120714416	120714466	(17680251)	+	(GCCACC)n	Simple_repeat	1	51	(0)	4165550
12	19.7	0.0	0.0	chr9	121499924	121499952	(16894765)	+	(GAGT)n	Simple_repeat	1	29	(0)	4167110
2237	12.3	0.0	2.2	chr9	121667481	121667797	(16726920)	C	AluSq	SINE/Alu	(3)	310	1	4167497
2395	11.1	1.1	0.8	chr9	121667824	121668177	(16726540)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4167498
767	9.4	0.0	0.0	chr9	121668197	121668292	(16726425)	C	AluSc	SINE/Alu	(15)	294	199	4167499
193	25.4	1.5	5.6	chr9	122912997	122913067	(15481650)	+	L2b	LINE/L2	3303	3370	(5)	4169766
19	4.0	0.0	0.0	chr9	122913184	122913209	(15481508)	+	(TCC)n	Simple_repeat	1	26	(0)	4169767
29	18.5	2.6	2.5	chr9	123929804	123929880	(14464837)	+	(CCCGG)n	Simple_repeat	1	79	(0)	4171512
14	24.8	1.3	7.7	chr9	123929927	123930003	(14464714)	+	(GCCC)n	Simple_repeat	1	78	(0)	4171513
12	5.5	0.0	0.0	chr9	123930054	123930072	(14464645)	+	(CGC)n	Simple_repeat	1	19	(0)	4171514
24	26.3	0.0	3.7	chr9	123930114	123930207	(14464510)	+	(CGC)n	Simple_repeat	1	90	(0)	4171514
14	13.3	7.0	2.2	chr9	123930228	123930270	(14464447)	+	G-rich	Low_complexity	1	46	(0)	4171515
260	31.1	2.9	3.6	chr9	124868723	124868859	(13525858)	+	L2b	LINE/L2	3071	3206	(169)	4173428
16	15.3	0.0	5.0	chr9	124869136	124869175	(13525542)	+	(GGC)n	Simple_repeat	1	40	(0)	4173429
19	13.2	4.5	7.1	chr9	124869211	124869277	(13525440)	+	(GAGCG)n	Simple_repeat	1	70	(0)	4173430
17	8.2	0.0	0.0	chr9	124869371	124869396	(13525321)	+	(GGC)n	Simple_repeat	1	26	(0)	4173431
26	20.9	0.0	0.0	chr9	125189733	125189788	(13204929)	+	(GCG)n	Simple_repeat	1	56	(0)	4174090
705	30.6	4.8	0.4	chr9	126784618	126784844	(11609873)	C	MIRb	SINE/MIR	(17)	251	15	4177048
2673	7.5	2.5	0.0	chr9	126784845	126785190	(11609527)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4177049
705	30.6	4.8	0.4	chr9	126785191	126785202	(11609515)	C	MIRb	SINE/MIR	(254)	14	1	4177048
463	23.3	11.5	0.7	chr9	126791393	126791539	(11603178)	+	Charlie8	DNA/hAT-Charlie	115	279	(2149)	4177068
759	23.9	8.1	2.5	chr9	126791630	126791873	(11602844)	C	LTR33	LTR/ERVL	(1)	514	256	4177069
16	10.6	10.3	5.3	chr9	127225239	127225306	(11169411)	+	(GCCCGA)n	Simple_repeat	1	75	(0)	4177820
41	4.1	2.0	0.0	chr9	127225801	127225851	(11168866)	+	(GCCCCTCGC)n	Simple_repeat	1	52	(0)	4177821
2567	5.4	0.0	0.0	chr9	127339016	127339311	(11055406)	+	AluY	SINE/Alu	1	296	(15)	4178023
2630	9.3	0.3	3.5	chr9	127339312	127339608	(11055109)	C	THE1A	LTR/ERVL-MaLR	(57)	298	1	4178022
108	31.8	1.3	1.0	chr9	127865862	127866252	(10528465)	+	(TG)n	Simple_repeat	1	396	(0)	4179205
2494	4.3	0.7	0.3	chr9	128028296	128028600	(10366117)	+	AluY	SINE/Alu	1	306	(5)	4179594
370	29.8	1.2	6.9	chr9	128028626	128028798	(10365919)	C	HAL1	LINE/L1	(38)	2469	2307	4179595
538	28.2	2.9	2.5	chr9	128100031	128100235	(10294482)	+	MIR	SINE/MIR	11	217	(45)	4179774
2095	10.9	1.4	1.7	chr9	128193429	128193721	(10200996)	+	AluSx1	SINE/Alu	3	294	(18)	4179941
24	12.1	4.2	6.7	chr9	128340627	128340718	(10053999)	+	(GCGG)n	Simple_repeat	1	89	(0)	4180291
13	8.5	0.0	14.0	chr9	128552779	128552828	(9841889)	+	(GGCGG)n	Simple_repeat	1	50	(0)	4180818
15	17.3	5.2	4.9	chr9	128882181	128882238	(9512479)	+	(CGGC)n	Simple_repeat	1	61	(0)	4181567
37	10.5	0.0	0.0	chr9	129177668	129177729	(9216988)	+	(GCTGGTGCA)n	Simple_repeat	1	62	(0)	4182244
26	19.2	0.0	1.6	chr9	129177826	129177886	(9216831)	+	(GCTGGT)n	Simple_repeat	1	61	(0)	4182245
12	31.3	0.0	0.0	chr9	129178076	129178119	(9216598)	+	(GCT)n	Simple_repeat	1	44	(0)	4182246
2632	8.3	0.8	9.1	chr9	129248491	129248887	(9145830)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4182417
6551	15.1	4.1	6.2	chr9	129248914	129249407	(9145310)	+	L1MB7	LINE/L1	4004	4485	(1661)	4182418
15	10.4	0.0	5.7	chr9	129488448	129488482	(8906235)	+	G-rich	Low_complexity	1	35	(0)	4182951
23	23.4	1.8	7.2	chr9	129488514	129488622	(8906095)	+	(CGCCC)n	Simple_repeat	1	111	(0)	4182952
245	23.7	2.1	0.0	chr9	129488847	129488932	(8905785)	+	MIR3	SINE/MIR	53	147	(121)	4182953
11	20.8	0.0	2.9	chr9	129697316	129697350	(8697367)	+	(TCCCCC)n	Simple_repeat	1	35	(0)	4183422
19	20.2	7.6	4.4	chr9	129697497	129697601	(8697116)	+	(TGGCGCGC)n	Simple_repeat	1	113	(0)	4183423
778	31.6	10.4	5.2	chr9	129984285	129984630	(8410087)	+	L1M7	LINE/L1	22	390	(2031)	4184038
2890	5.4	0.3	0.8	chr9	129984631	129984986	(8409731)	+	THE1A	LTR/ERVL-MaLR	2	355	(0)	4184039
778	31.6	10.4	5.2	chr9	129984987	129985273	(8409444)	+	L1M7	LINE/L1	391	692	(1729)	4184038
491	31.2	3.5	5.2	chr9	129985287	129985516	(8409201)	C	MIR	SINE/MIR	(35)	227	2	4184040
20	21.3	4.9	3.5	chr9	130681524	130681604	(7713113)	+	(GCGCAC)n	Simple_repeat	1	85	(0)	4185574
39	0.0	0.0	0.0	chr9	130681606	130681641	(7713076)	+	(CGC)n	Simple_repeat	1	36	(0)	4185575
1205	22.3	5.1	1.2	chr9	130786031	130786352	(7608365)	C	MER74B	LTR/ERVL	(77)	545	211	4185794
322	9.4	0.0	8.6	chr9	130786392	130786449	(7608268)	C	MER74B	LTR/ERVL	(569)	53	1	4185794
426	7.8	1.5	0.0	chr9	130786483	130786546	(7608171)	+	LTR41C	LTR/ERVL	622	686	(15)	4185795
228	23.6	2.7	1.4	chr9	130786633	130786705	(7608012)	C	LTR81C	LTR/Gypsy	(959)	194	121	4185796
14	24.0	4.5	2.9	chr9	131096693	131096759	(7297958)	+	G-rich	Low_complexity	1	70	(0)	4186389
12	24.4	0.0	4.3	chr9	131096868	131096914	(7297803)	+	(GCGCCGC)n	Simple_repeat	1	47	(0)	4186390
17	16.3	3.2	6.2	chr9	131097001	131097062	(7297655)	+	(CCTCCG)n	Simple_repeat	1	64	(0)	4186391
33	16.2	14.3	1.1	chr9	131394000	131394160	(7000557)	+	(GCGA)n	Simple_repeat	1	184	(0)	4187013
16	18.4	3.3	9.7	chr9	131394159	131394248	(7000469)	+	(GCCCC)n	Simple_repeat	1	93	(0)	4187014
305	20.8	5.5	1.2	chr9	131407811	131407912	(6986805)	+	MIRc	SINE/MIR	81	184	(78)	4187041
759	12.0	4.0	7.2	chr9	133031186	133031338	(5363379)	C	LTR10B	LTR/ERV1	(0)	547	400	4189956
1461	10.1	0.4	0.9	chr9	133031340	133031568	(5363149)	C	AluSx	SINE/Alu	(1)	311	84	4189957
2977	22.7	9.6	3.0	chr9	133596456	133597924	(4796793)	+	L1MEc	LINE/L1	108	1664	(4720)	4190818
1714	12.5	16.8	0.6	chr9	134445050	134445402	(3949315)	+	MSTA	LTR/ERVL-MaLR	7	428	(0)	4192020
619	19.0	29.0	1.1	chr9	134445405	134445687	(3949030)	+	L1MC3	LINE/L1	7423	7784	(1)	4192021
43615	7.8	0.6	0.9	chr9	135437717	135439587	(2955130)	C	HERVE-int	LTR/ERV1	(1991)	5822	3977	4193232
2730	5.7	0.6	0.0	chr9	135638000	135638352	(2756365)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4193472
2043	12.3	6.0	2.2	chr9	135870112	135870477	(2524240)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4193717
3080	20.1	3.1	4.0	chr9	135870478	135870511	(2524206)	+	L1MB7	LINE/L1	6084	6108	(76)	4193715
38	22.9	3.1	3.0	chr9	135907398	135907526	(2487191)	+	(GGCGGC)n	Simple_repeat	1	133	(0)	4193765
22	21.2	4.2	7.3	chr9	135907576	135907694	(2487023)	+	(GCCCC)n	Simple_repeat	1	124	(0)	4193766
22	10.1	7.0	3.3	chr9	136328959	136329015	(2065702)	+	(GTGAGT)n	Simple_repeat	1	61	(0)	4194275
13	12.0	0.0	3.5	chr9	137200375	137200403	(1194314)	+	G-rich	Low_complexity	1	29	(0)	4195338
19	14.4	6.5	0.0	chr9	137200466	137200511	(1194206)	+	(CCG)n	Simple_repeat	1	49	(0)	4195339
12	19.5	2.1	6.2	chr9	137200755	137200801	(1193916)	+	(GCC)n	Simple_repeat	1	48	(0)	4195340
11849	8.9	0.8	1.4	chr9	137402314	137402737	(991980)	C	THE1A-int	LTR/ERVL-MaLR	(1155)	425	1	4195585
2525	9.5	1.7	0.0	chr9	137402738	137403086	(991631)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4195585
4496	12.1	0.9	1.1	chrX	3785352	3785544	(152255351)	C	MER41B	LTR/ERV1	(0)	634	443	4365586
1955	15.3	4.2	2.7	chrX	3785545	3785919	(152254976)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4365587
4496	12.1	0.9	1.1	chrX	3785920	3786360	(152254535)	C	MER41B	LTR/ERV1	(192)	442	1	4365586
323	0.0	0.0	0.0	chrX	6511925	6511961	(149528934)	C	THE1B	LTR/ERVL-MaLR	(0)	355	319	4370251
1955	10.8	4.1	2.7	chrX	6511988	6512320	(149528575)	C	THE1B	LTR/ERVL-MaLR	(26)	338	1	4370251
2395	10.6	1.1	0.8	chrX	7459183	7459535	(148581360)	+	THE1A	LTR/ERVL-MaLR	2	355	(0)	4371728
79	12.4	3.9	1.2	chrX	7459541	7459694	(148581201)	+	(CTAT)n	Simple_repeat	1	160	(0)	4371729
1585	19.7	3.1	0.3	chrX	8264167	8264477	(147776418)	+	MLT2D	LTR/ERVL	1	320	(94)	4372906
65	3.2	0.0	0.0	chrX	8264499	8264562	(147776333)	+	(AC)n	Simple_repeat	1	64	(0)	4372907
2059	15.3	2.0	4.2	chrX	8264588	8264942	(147775953)	C	THE1B	LTR/ERVL-MaLR	(17)	347	1	4372908
264	36.7	6.2	5.9	chrX	8264951	8265254	(147775641)	+	L2c	LINE/L2	3070	3374	(13)	4372909
2129	11.3	1.8	0.8	chrX	13395799	13396120	(142644775)	C	MER51B	LTR/ERV1	(0)	377	70	4381100
2898	8.5	0.3	0.0	chrX	13396121	13396474	(142644421)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4381101
944	12.4	0.0	13.4	chrX	13396475	13396603	(142644292)	C	MER51B	LTR/ERV1	(267)	110	1	4381100
2330	12.0	1.1	0.8	chrX	13957660	13958013	(142082882)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4382038
946	27.2	13.5	2.1	chrX	15077666	15078273	(140962622)	C	L1ME3Cz	LINE/L1	(262)	735	78	4383737
2431	9.7	0.8	1.1	chrX	15078274	15078629	(140962266)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4383738
946	28.3	13.8	1.7	chrX	15078630	15078662	(140962233)	C	L1ME3Cz	LINE/L1	(920)	77	47	4383737
337	27.1	11.9	0.0	chrX	15078665	15078781	(140962114)	C	L1MEd	LINE/L1	(2587)	3559	3427	4383739
12074	8.0	0.4	0.6	chrX	15083702	15085284	(140955611)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	4383748
2222	13.1	0.8	0.8	chrX	15085285	15085638	(140955257)	+	THE1A	LTR/ERVL-MaLR	1	354	(1)	4383748
374	27.4	14.3	1.0	chrX	15350369	15350659	(140690236)	+	LTR16	LTR/ERVL	102	437	(1)	4384222
74	8.9	2.7	5.2	chrX	15350707	15350855	(140690040)	+	(CTTT)n	Simple_repeat	1	153	(0)	4384223
12	21.4	3.9	3.7	chrX	15854627	15854678	(140186217)	+	(CCCATCCC)n	Simple_repeat	1	54	(0)	4385077
23	15.4	0.0	5.4	chrX	15854687	15854742	(140186153)	+	(CGG)n	Simple_repeat	1	56	(0)	4385078
16	33.6	0.0	1.6	chrX	15855065	15855125	(140185770)	+	(CG)n	Simple_repeat	1	61	(0)	4385079
12	35.7	0.0	2.7	chrX	16786742	16786815	(139254080)	+	(GGTGG)n	Simple_repeat	1	74	(0)	4386712
14	3.6	0.0	11.1	chrX	16946558	16946593	(139094302)	+	(GGGCGG)n	Simple_repeat	1	36	(0)	4387049
12	16.7	3.7	7.1	chrX	16946718	16946738	(139094157)	+	(GCGGTG)n	Simple_repeat	1	23	(0)	4387050
29	5.9	0.0	0.0	chrX	16946739	16946774	(139094121)	+	(GGC)n	Simple_repeat	1	36	(0)	4387051
12	16.7	3.7	7.1	chrX	16946775	16946806	(139094089)	+	(GCGGTG)n	Simple_repeat	6	34	(0)	4387052
31	9.3	0.0	0.0	chrX	16946867	16946913	(139093982)	+	(GGC)n	Simple_repeat	1	47	(0)	4387053
1197	30.6	3.4	4.7	chrX	17001250	17001674	(139039221)	+	L1MC4	LINE/L1	7316	7740	(302)	4387149
2894	7.9	0.3	2.2	chrX	17001675	17002036	(139038859)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4387150
18	20.4	0.0	5.4	chrX	17375955	17376010	(138664885)	+	(GCC)n	Simple_repeat	1	56	(0)	4387742
21	18.3	1.9	1.9	chrX	17376056	17376107	(138664788)	+	(CGG)n	Simple_repeat	1	53	(0)	4387743
2737	6.8	1.1	0.0	chrX	18313197	18313547	(137727348)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4389253
26	20.7	1.6	0.0	chrX	19887481	19887541	(136153354)	+	(GCT)n	Simple_repeat	1	62	(0)	4392146
45	0.0	0.0	0.0	chrX	19887602	19887650	(136153245)	+	(A)n	Simple_repeat	1	49	(0)	4392147
24	20.2	4.4	0.0	chrX	19887765	19887832	(136153063)	+	G-rich	Low_complexity	1	71	(0)	4392148
15	22.9	2.7	6.5	chrX	20266637	20266711	(135774184)	+	(CCCG)n	Simple_repeat	1	77	(0)	4392859
42	10.2	0.0	0.0	chrX	20266727	20266791	(135774104)	+	(GCGGCA)n	Simple_repeat	1	65	(0)	4392860
42	0.0	0.0	0.0	chrX	21374595	21374632	(134666263)	+	(GCA)n	Simple_repeat	1	38	(0)	4394394
2797	8.8	0.0	9.7	chrX	21894850	21895252	(134145643)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4395114
663	19.8	8.1	4.7	chrX	21895253	21895429	(134145466)	+	MER34A	LTR/ERV1	386	571	(0)	4395113
2180	10.7	4.2	11.4	chrX	22061832	22062243	(133978652)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4395427
2985	6.8	0.3	0.3	chrX	23605008	23605362	(132435533)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4397679
707	20.8	0.8	0.0	chrX	24464272	24464401	(131576494)	C	FLAM_A	SINE/Alu	(11)	131	1	4399579
2160	13.2	1.2	0.3	chrX	31163134	31163451	(124877444)	+	THE1B	LTR/ERVL-MaLR	1	321	(43)	4409361
11769	8.4	1.8	0.1	chrX	34441366	34442917	(121597978)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	4413820
2329	11.1	0.8	0.8	chrX	34442918	34443272	(121597623)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4413820
6401	8.4	1.4	0.9	chrX	34443275	34444608	(121596287)	+	L1PB1	LINE/L1	4453	5791	(360)	4413819
2791	19.2	1.4	4.8	chrX	37427281	37427827	(118613068)	C	L1MA10	LINE/L1	(14)	6320	5792	4417390
2751	6.3	1.4	0.3	chrX	37427828	37428178	(118612717)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4417391
11673	9.5	0.4	0.5	chrX	37428179	37429758	(118611137)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	2	4417391
220	33.3	8.2	10.8	chrX	37977066	37977630	(118063265)	C	L2c	LINE/L2	(0)	3387	2838	4418246
1106	22.4	13.6	1.9	chrX	37977631	37977700	(118063195)	C	LTR52	LTR/ERVL	(3)	418	346	4418247
55	0.0	0.0	0.0	chrX	37977701	37977747	(118063148)	+	(CA)n	Simple_repeat	1	47	(0)	4418248
1106	22.4	13.6	1.9	chrX	37977748	37978044	(118062851)	C	LTR52	LTR/ERVL	(76)	345	1	4418247
195	35.2	13.3	6.0	chrX	37978045	37978417	(118062478)	C	L2c	LINE/L2	(582)	2837	2424	4418246
12	27.7	0.0	0.0	chrX	38327280	38327318	(117713577)	+	(GCCC)n	Simple_repeat	1	39	(0)	4418772
15	12.2	0.0	0.0	chrX	40097719	40097745	(115943150)	+	(TGTG)n	Simple_repeat	1	27	(0)	4421761
14	19.6	2.2	4.3	chrX	40097789	40097833	(115943062)	+	(CCG)n	Simple_repeat	1	46	(0)	4421762
38	15.1	2.4	2.3	chrX	40097986	40098134	(115942761)	+	(TCCC)n	Simple_repeat	1	149	(0)	4421763
18	28.0	1.5	1.5	chrX	40098423	40098488	(115942407)	+	(GGC)n	Simple_repeat	1	67	(0)	4421764
13	0.0	0.0	0.0	chrX	40109023	40109039	(115931856)	+	(GCG)n	Simple_repeat	1	17	(0)	4421774
14	25.2	3.5	1.7	chrX	41085233	41085290	(114955605)	+	G-rich	Low_complexity	1	60	(0)	4423642
34	12.3	0.0	0.0	chrX	41085363	41085417	(114955478)	+	(CGC)n	Simple_repeat	1	55	(0)	4423643
15	17.6	0.0	0.0	chrX	41085757	41085788	(114955107)	+	GA-rich	Low_complexity	1	32	(0)	4423644
12	16.9	2.9	2.8	chrX	41085870	41085904	(114954991)	+	GA-rich	Low_complexity	1	36	(0)	4423645
14	21.1	0.0	8.6	chrX	41923440	41923497	(114117398)	+	(GCG)n	Simple_repeat	1	58	(0)	4425255
2885	19.7	7.1	10.0	chrX	43177433	43177687	(112863208)	+	LTR25-int	LTR/ERV1	185	410	(4807)	4426984
1960	17.7	1.1	0.0	chrX	43177688	43178038	(112862857)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4426985
3593	17.3	5.9	4.8	chrX	43178039	43179339	(112861556)	+	LTR25-int	LTR/ERV1	3752	4415	(2773)	4426984
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
562	25.5	10.5	5.5	chrX	44674146	44674174	(111366721)	C	MIR	SINE/MIR	(0)	262	236	4429444
2220	11.1	2.8	6.4	chrX	44674175	44674386	(111366509)	C	THE1B	LTR/ERVL-MaLR	(0)	364	164	4429445
2455	9.5	0.0	0.0	chrX	44674387	44674690	(111366205)	+	AluSx1	SINE/Alu	1	304	(8)	4429446
29	20.5	1.5	0.0	chrX	44873335	44873401	(111167494)	+	(GCC)n	Simple_repeat	1	68	(0)	4429939
16	11.5	0.0	3.2	chrX	44873571	44873601	(111167294)	+	(CGC)n	Simple_repeat	1	31	(0)	4429940
2399	12.9	3.6	2.5	chrX	45135348	45135705	(110905190)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	4430351
2529	8.2	0.6	5.6	chrX	45634722	45635095	(110405800)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4431014
6058	21.9	4.5	3.5	chrX	45635096	45636617	(110404278)	C	L1MD3	LINE/L1	(107)	7888	6345	4431013
13	21.0	8.1	1.5	chrX	46912197	46912258	(109128637)	+	G-rich	Low_complexity	1	67	(0)	4433039
17	11.3	5.0	2.4	chrX	46912446	46912485	(109128410)	+	(CCG)n	Simple_repeat	1	42	(0)	4433040
1818	16.4	0.0	0.0	chrX	49345995	49346281	(106694614)	C	AluSx	SINE/Alu	(25)	287	1	4437942
1452	22.9	0.8	2.0	chrX	52424270	52424626	(103616269)	+	MLT2D	LTR/ERVL	1	353	(61)	4441863
18	0.0	0.0	0.0	chrX	52424638	52424657	(103616238)	+	(TC)n	Simple_repeat	1	20	(0)	4441864
19	4.3	0.0	0.0	chrX	52424658	52424681	(103616214)	+	(CA)n	Simple_repeat	1	24	(0)	4441865
467	16.7	0.0	0.0	chrX	52424703	52424774	(103616121)	+	MER68-int	LTR/ERVL	2859	2930	(60)	4441862
1628	17.7	5.4	0.3	chrX	54513686	54514003	(101526892)	+	L1MD3	LINE/L1	7655	7989	(6)	4445978
288	24.1	14.3	0.0	chrX	54514007	54514037	(101526858)	+	L1MC4a	LINE/L1	2430	2460	(3755)	4445975
2839	5.9	0.3	0.3	chrX	54514038	54514392	(101526503)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4445979
288	24.1	14.3	0.0	chrX	54514393	54514468	(101526427)	+	L1MC4a	LINE/L1	2461	2554	(3661)	4445975
262	22.0	0.0	0.0	chrX	54807589	54807638	(101233257)	+	MIRb	SINE/MIR	10	59	(209)	4446410
11236	10.7	1.1	0.1	chrX	56601616	56603179	(99437716)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	4448349
2549	8.3	1.1	0.0	chrX	56603180	56603530	(99437365)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4448349
508	24.7	0.7	5.2	chrX	56603531	56603651	(99437244)	C	LTR39	LTR/ERV1	(57)	726	610	4448348
13	19.6	0.0	0.0	chrX	56995464	56995493	(99045402)	+	(GGC)n	Simple_repeat	1	30	(0)	4448724
12	15.3	3.5	0.0	chrX	56995842	56995870	(99045025)	+	(CCCT)n	Simple_repeat	1	30	(0)	4448725
17	24.4	1.9	0.0	chrX	57121834	57121886	(98919009)	+	(CCGCCC)n	Simple_repeat	1	54	(0)	4448819
253	3.1	0.0	0.0	chrX	63351606	63351637	(92689258)	C	HAL1ME	LINE/L1	(2280)	185	154	4450078
2534	9.6	2.8	0.0	chrX	65627303	65627647	(90413248)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4452639
11482	9.4	2.1	1.1	chrX	65627648	65628787	(90412108)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	425	4452639
2744	8.7	0.0	0.0	chrX	65629509	65629863	(90411032)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4452639
12	18.0	1.6	9.7	chrX	68498554	68498614	(87542281)	+	G-rich	Low_complexity	1	62	(0)	4456465
8661	13.5	2.9	3.9	chrX	70005880	70007283	(86033612)	C	L1MC2	LINE/L1	(346)	6173	4781	4458969
2429	13.9	1.9	0.0	chrX	70007284	70007651	(86033244)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4458970
8661	19.0	4.2	7.9	chrX	70007652	70009547	(86031348)	C	L1MC2	LINE/L1	(1541)	4780	3048	4458969
2002	13.9	3.9	1.6	chrX	71649063	71649434	(84391461)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4462014
382	24.8	7.0	13.2	chrX	71649435	71649453	(84391442)	C	MIR	SINE/MIR	(108)	154	150	4462013
30	0.0	0.0	0.0	chrX	71649454	71649481	(84391414)	+	(TTTTAT)n	Simple_repeat	1	28	(0)	4462015
689	33.1	7.4	3.8	chrX	72280288	72280821	(83760074)	C	L2	LINE/L2	(529)	2890	2336	4463046
464	24.4	16.0	4.7	chrX	72280957	72281048	(83759847)	C	L1ME4c	LINE/L1	(562)	268	156	4463044
22	32.3	0.0	0.0	chrX	72306244	72306323	(83734572)	+	(GCGG)n	Simple_repeat	1	80	(0)	4463101
13	8.3	9.5	4.3	chrX	72306431	72306472	(83734423)	+	(CGGCC)n	Simple_repeat	1	46	(0)	4463102
1793	16.6	5.8	3.4	chrX	73201848	73202202	(82838693)	C	THE1A	LTR/ERVL-MaLR	(0)	364	1	4464308
1930	17.4	0.3	1.0	chrX	73913930	73914065	(82126830)	+	AluJb	SINE/Alu	1	136	(176)	4464907
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
407	28.0	6.2	8.3	chrX	74615017	74615112	(81425783)	C	L2a	LINE/L2	(5)	3421	3342	4465904
14713	17.1	2.6	2.2	chrX	74849132	74853046	(81187849)	+	L1M2	LINE/L1	727	4656	(2906)	4466205
13	23.0	1.8	5.3	chrX	74924934	74924989	(81115906)	+	(CGCTGT)n	Simple_repeat	1	57	(0)	4466273
25	27.0	1.3	1.2	chrX	74924972	74925050	(81115845)	+	(CGC)n	Simple_repeat	1	80	(0)	4466274
32	31.3	0.8	1.6	chrX	74925326	74925447	(81115448)	+	(GCT)n	Simple_repeat	1	123	(0)	4466275
38	7.7	0.0	1.8	chrX	74925484	74925540	(81115355)	+	(CCT)n	Simple_repeat	1	57	(0)	4466276
9408	10.3	8.3	0.1	chrX	75848699	75850147	(80190748)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	4467056
2244	11.1	1.1	8.4	chrX	75850148	75850530	(80190365)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4467056
4701	23.7	2.4	3.8	chrX	75850534	75851653	(80189242)	C	L1PREC2	LINE/L1	(5671)	1114	11	4467053
9841	19.8	4.5	2.1	chrX	79061377	79062395	(76978500)	C	L1MA4	LINE/L1	(697)	7022	5981	4470467
2236	12.1	2.5	0.9	chrX	79062396	79062744	(76978151)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4470469
9841	19.4	4.4	2.3	chrX	79062745	79064064	(76976831)	C	L1MA4	LINE/L1	(1582)	5980	4631	4470467
489	33.2	1.6	4.7	chrX	81060105	81060133	(74980762)	+	MIR3	SINE/MIR	9	37	(171)	4472477
2267	10.7	2.8	0.9	chrX	81060134	81060481	(74980414)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4472478
489	33.2	1.6	4.7	chrX	81060482	81060644	(74980251)	+	MIR3	SINE/MIR	38	195	(13)	4472477
11031	12.6	0.3	0.0	chrX	82240046	82241620	(73799275)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	4473677
2187	12.4	2.0	0.9	chrX	82241621	82241970	(73798925)	+	THE1A	LTR/ERVL-MaLR	1	354	(1)	4473677
610	29.0	11.1	3.0	chrX	82241972	82242302	(73798593)	C	HAL1	LINE/L1	(657)	1850	1490	4473678
2667	9.1	0.6	0.0	chrX	83672325	83672677	(72368218)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4475164
6870	19.7	1.8	1.8	chrX	83672678	83673215	(72367680)	+	L1PA15	LINE/L1	3625	4162	(2511)	4475163
1990	12.3	6.9	1.7	chrX	84630429	84630783	(71410112)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4476140
16	21.3	2.6	0.0	chrX	85243850	85243887	(70797008)	+	(GC)n	Simple_repeat	1	39	(0)	4476826
43	4.3	0.0	0.0	chrX	85244124	85244171	(70796724)	+	(GGC)n	Simple_repeat	1	48	(0)	4476827
10932	11.3	1.6	0.0	chrX	85442553	85444107	(70596788)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	4477007
2607	10.2	0.3	0.0	chrX	85444108	85444461	(70596434)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4477007
694	29.2	5.7	0.5	chrX	85444462	85444678	(70596217)	+	L2a	LINE/L2	3198	3426	(0)	4477005
2443	10.2	0.8	0.8	chrX	86017333	86017687	(70023208)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4477606
1876	14.4	5.9	0.6	chrX	88420048	88420383	(67620512)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4480245
282	7.9	0.0	0.0	chrX	88420384	88420421	(67620474)	+	THE1A-int	LTR/ERVL-MaLR	1	38	(1542)	4480245
1039	12.6	0.0	4.0	chrX	88420419	88420592	(67620303)	C	MER52D	LTR/ERV1	(327)	1796	1630	4480246
2704	8.9	0.0	0.0	chrX	93150834	93151183	(62889712)	C	THE1A	LTR/ERVL-MaLR	(5)	350	1	4485294
2184	13.9	0.8	0.8	chrX	94334430	94334784	(61706111)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4486818
11190	10.9	0.4	0.2	chrX	94334785	94336361	(61704534)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	4486818
601	27.1	5.8	2.3	chrX	96791752	96791974	(59248921)	C	MIRb	SINE/MIR	(11)	257	14	4489661
20	25.4	4.3	0.0	chrX	101931757	101931826	(54109069)	+	(GCC)n	Simple_repeat	1	73	(0)	4496657
12	15.8	9.5	0.0	chrX	101931826	101931867	(54109028)	+	(GGCA)n	Simple_repeat	1	46	(0)	4496658
29	3.2	0.0	0.0	chrX	101931878	101931909	(54108986)	+	(GCC)n	Simple_repeat	1	32	(0)	4496659
1834	18.7	2.1	1.6	chrX	102580559	102580938	(53459957)	C	LTR52	LTR/ERVL	(39)	382	1	4497418
434	29.4	7.2	3.5	chrX	102844136	102844361	(53196534)	+	LTR79	LTR/ERVL	286	520	(7)	4497722
263	27.8	7.7	11.5	chrX	102844460	102844703	(53196192)	C	LTR79	LTR/ERVL	(286)	241	8	4497723
10058	11.8	3.9	1.3	chrX	106012007	106013545	(50027350)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	4502295
526	28.7	2.3	1.1	chrX	107707608	107707787	(48333108)	C	MIR3	SINE/MIR	(47)	183	2	4504692
33	23.2	1.7	5.0	chrX	107826209	107826325	(48214570)	+	(GCG)n	Simple_repeat	1	119	(0)	4504922
13	19.7	10.3	0.0	chrX	107826688	107826745	(48214150)	+	G-rich	Low_complexity	1	64	(0)	4504923
2949	5.4	0.3	0.0	chrX	108113562	108113915	(47926980)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4505320
17	20.5	1.4	8.2	chrX	108735666	108735737	(47305158)	+	(CCG)n	Simple_repeat	1	73	(0)	4506166
13	26.5	2.2	0.0	chrX	108735935	108735979	(47304916)	+	(GCG)n	Simple_repeat	1	46	(0)	4506167
4793	7.6	0.3	0.0	chrX	108972887	108973492	(47067403)	+	THE1A-int	LTR/ERVL-MaLR	973	1580	(0)	4506397
2545	10.4	0.0	0.6	chrX	108973493	108973849	(47067046)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4506397
1344	15.7	4.4	0.8	chrX	108973851	108974113	(47066782)	+	L1MA3	LINE/L1	3718	3990	(3575)	4506394
271	18.0	0.0	0.0	chrX	110347073	110347122	(45693773)	+	L2a	LINE/L2	3377	3426	(0)	4508248
2278	12.5	0.6	0.8	chrX	112139718	112140073	(43900822)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4510967
6321	19.9	2.8	1.4	chrX	112140074	112140405	(43900490)	C	L1MD3	LINE/L1	(999)	6996	6660	4510966
2249	16.9	6.5	9.9	chrX	113985717	113985995	(42054900)	+	LOR1a	LTR/ERV1	1	275	(222)	4513476
2689	8.5	0.3	0.0	chrX	113985996	113986349	(42054546)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4513480
2249	16.9	6.5	9.9	chrX	113986350	113986583	(42054312)	+	LOR1a	LTR/ERV1	276	495	(2)	4513476
2252	10.2	1.0	0.0	chrX	114064024	114064316	(41976579)	+	AluSc8	SINE/Alu	2	297	(14)	4513617
2677	9.3	0.3	0.0	chrX	114064362	114064715	(41976180)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4513618
2436	8.8	0.0	0.3	chrX	114064775	114065080	(41975815)	+	AluSq2	SINE/Alu	1	305	(8)	4513619
43432	9.7	4.1	3.9	chrX	115916899	115923779	(40117116)	C	Harlequin-int	LTR/ERV1	(0)	6896	1	4516140
2250	12.8	0.8	0.6	chrX	116685978	116686331	(39354564)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4516943
10883	10.6	1.8	0.3	chrX	116686332	116687887	(39353008)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	4516943
2707	8.2	0.3	0.0	chrX	117119995	117120348	(38920547)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4517376
853	29.5	1.6	0.8	chrX	118323091	118323346	(37717549)	+	L2a	LINE/L2	2563	2820	(599)	4518963
2052	16.7	0.0	0.0	chrX	118323347	118323628	(37717267)	+	AluJb	SINE/Alu	1	282	(30)	4518964
17	24.1	3.3	1.6	chrX	118727424	118727483	(37313412)	+	(GCC)n	Simple_repeat	1	62	(0)	4519783
1878	8.9	14.4	2.1	chrX	119111924	119112256	(36928639)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4520466
2360	11.3	0.0	0.0	chrX	119824757	119825066	(36215829)	C	AluSx	SINE/Alu	(2)	310	1	4521922
191	32.4	12.1	3.3	chrX	119825067	119825082	(36215813)	+	L2	LINE/L2	1850	1861	(1558)	4521921
1851	14.4	9.3	1.4	chrX	119825089	119825433	(36215462)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4521923
4052	8.6	2.7	3.5	chrX	119825445	119825877	(36215018)	+	HSMAR2	DNA/TcMar-Mariner	3	434	(868)	4521924
1437	22.7	13.6	5.0	chrX	120090023	120090578	(35950317)	C	LTR36	LTR/ERV1	(0)	611	1	4522428
10022	11.0	13.9	11.8	chrX	121136432	121136889	(34904006)	C	MER51-int	LTR/ERV1	(4726)	3090	2607	4524020
2295	11.5	1.1	0.9	chrX	121136890	121137239	(34903656)	C	THE1A	LTR/ERVL-MaLR	(0)	355	5	4524025
2261	10.9	2.3	0.9	chrX	121889973	121890322	(34150573)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4524953
969	15.5	0.0	0.0	chrX	123316775	123316929	(32723966)	+	Tigger3a	DNA/TcMar-Tigger	1	155	(193)	4526594
2693	8.5	0.6	0.0	chrX	123316930	123317282	(32723613)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4526595
11447	8.1	1.3	0.1	chrX	123317283	123318844	(32722051)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	4526595
2569	9.9	0.3	0.3	chrX	123318845	123319199	(32721696)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4526595
1336	10.7	0.5	0.0	chrX	123319200	123319396	(32721499)	+	Tigger3c	DNA/TcMar-Tigger	405	602	(0)	4526596
220	29.1	0.0	0.0	chrX	123733342	123733396	(32307499)	C	L2c	LINE/L2	(12)	3375	3321	4527196
356	26.4	6.5	7.5	chrX	123764647	123764925	(32275970)	C	L1M3	LINE/L1	(2660)	3480	3205	4527272
38	0.0	0.0	0.0	chrX	123765232	123765266	(32275629)	+	(CCG)n	Simple_repeat	1	35	(0)	4527273
6979	15.6	4.1	1.7	chrX	126457717	126459582	(29581313)	+	L1MA2	LINE/L1	2715	4759	(2806)	4531179
1537	12.4	3.1	0.0	chrX	126459581	126459938	(29580957)	+	L1MA2	LINE/L1	6524	6890	(831)	4531179
9833	14.6	4.2	0.4	chrX	127811516	127813082	(28227813)	+	THE1B-int	LTR/ERVL-MaLR	3	1631	(0)	4532677
11289	10.1	0.7	0.2	chrX	127837665	127839236	(28201659)	C	THE1-int	LTR/ERVL-MaLR	(0)	1580	1	4532707
2571	10.1	1.4	0.0	chrX	127839239	127839586	(28201309)	C	THE1A	LTR/ERVL-MaLR	(2)	353	1	4532708
2674	13.0	2.6	3.4	chrX	127839587	127839901	(28200994)	+	L1PB3	LINE/L1	5405	5722	(432)	4532705
4104	18.1	2.4	3.8	chrX	127866652	127867531	(28173364)	+	MER11C	LTR/ERVK	204	1071	(0)	4532739
11145	10.2	0.8	0.2	chrX	128100961	128102529	(27938366)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	3	4532967
2494	11.0	0.3	0.0	chrX	128102532	128102885	(27938010)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4532967
13	14.5	7.9	0.0	chrX	129655028	129655065	(26385830)	+	G-rich	Low_complexity	1	41	(0)	4535044
19	26.8	1.1	6.2	chrX	130110745	130110839	(25930056)	+	G-rich	Low_complexity	1	96	(0)	4535977
39	23.0	0.9	1.9	chrX	130110927	130111031	(25929864)	+	G-rich	Low_complexity	1	106	(0)	4535978
13	15.6	0.0	7.3	chrX	130111054	130111094	(25929801)	+	(CGCC)n	Simple_repeat	1	41	(0)	4535979
14	9.3	0.0	0.0	chrX	130120918	130120940	(25919955)	+	(AGG)n	Simple_repeat	1	23	(0)	4535994
18	16.8	0.0	0.0	chrX	130268800	130268834	(25772061)	+	GA-rich	Low_complexity	1	35	(0)	4536265
2626	13.0	2.8	2.1	chrX	130455317	130455741	(25585154)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4536578
14	15.3	2.6	2.6	chrX	130524336	130524373	(25516522)	+	(GGAGTGG)n	Simple_repeat	1	39	(0)	4536676
2486	10.7	10.3	0.5	chrX	131388051	131388435	(24652460)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	4537987
18	4.1	0.0	0.0	chrX	132957457	132957481	(23083414)	+	(CGG)n	Simple_repeat	1	25	(0)	4540157
284	34.3	2.8	1.4	chrX	133445014	133445155	(22595740)	+	MIR3	SINE/MIR	16	159	(49)	4540942
532	31.2	3.6	1.8	chrX	133445159	133445377	(22595518)	+	MIRb	SINE/MIR	20	242	(26)	4540943
4631	11.2	1.9	8.2	chrX	134323845	134324596	(21716299)	C	L1MA4A	LINE/L1	(246)	6057	5353	4542435
833	18.7	5.5	0.0	chrX	134324597	134324751	(21716144)	C	AluJo	SINE/Alu	(12)	300	137	4542436
16652	14.7	2.1	2.8	chrX	134324752	134325433	(21715462)	C	L1MA4A	LINE/L1	(780)	5363	4697	4542435
25	11.8	1.6	6.2	chrX	134460090	134460152	(21580743)	+	G-rich	Low_complexity	1	64	(0)	4542713
22	18.8	1.8	1.8	chrX	134460222	134460277	(21580618)	+	(CCGCCT)n	Simple_repeat	1	57	(0)	4542714
17	29.3	2.4	2.4	chrX	134549324	134549405	(21491490)	+	(GAGC)n	Simple_repeat	1	84	(0)	4542925
14	18.8	0.0	2.6	chrX	134549560	134549597	(21491298)	+	(CGGAG)n	Simple_repeat	1	38	(0)	4542926
269	29.3	10.8	3.3	chrX	134991415	134991678	(21049217)	+	HAL1	LINE/L1	745	1078	(1387)	4543791
1989	11.4	0.3	9.4	chrX	135412325	135412488	(20628407)	C	AluJb	SINE/Alu	(1)	311	152	4544300
2235	13.4	3.6	2.8	chrX	135412489	135412849	(20628046)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4544301
1989	11.4	0.3	9.4	chrX	135412850	135413025	(20627870)	C	AluJb	SINE/Alu	(161)	151	2	4544300
16	23.4	2.9	4.2	chrX	135985459	135985528	(20055367)	+	G-rich	Low_complexity	1	72	(0)	4545166
1040	14.2	3.6	0.6	chrX	136162427	136162588	(19878307)	+	AluJo	SINE/Alu	64	230	(82)	4545534
794	16.6	0.0	3.3	chrX	136162590	136162739	(19878156)	+	MER5A	DNA/hAT-Charlie	43	187	(2)	4545535
239	20.8	0.0	2.0	chrX	136162759	136162807	(19878088)	+	MER5B	DNA/hAT-Charlie	1	48	(130)	4545536
1868	16.7	7.8	1.6	chrX	136162832	136163202	(19877693)	C	MLT1A1	LTR/ERVL-MaLR	(12)	396	1	4545537
521	27.8	4.4	1.9	chrX	136910629	136910782	(19130113)	+	MIRb	SINE/MIR	111	268	(0)	4546852
2033	16.5	3.3	3.0	chrX	139358897	139359259	(16681636)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4550582
13958	13.7	2.2	0.8	chrX	139359260	139359726	(16681169)	+	Tigger7	DNA/TcMar-Tigger	2019	2483	(8)	4550581
2761	8.4	0.0	0.3	chrX	139463948	139464303	(16576592)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4550713
13	17.2	4.9	2.3	chrX	140091570	140091610	(15949285)	+	(CGCG)n	Simple_repeat	1	43	(0)	4551700
43	28.4	1.7	3.4	chrX	140091612	140091784	(15949111)	+	GA-rich	Low_complexity	1	176	(0)	4551701
2797	11.9	3.0	0.9	chrX	141002791	141003240	(15037655)	C	LTR46	LTR/ERV1	(0)	460	1	4553136
1837	31.5	8.2	2.7	chrX	141373433	141374041	(14666854)	C	L2	LINE/L2	(357)	3062	2437	4553681
2187	12.3	1.4	0.8	chrX	141374042	141374394	(14666501)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4553682
1837	31.5	8.2	2.7	chrX	141374395	141374648	(14666247)	C	L2	LINE/L2	(983)	2436	2147	4553681
9044	15.0	2.2	1.6	chrX	142802662	142804728	(13236167)	C	L1PBa	LINE/L1	(3939)	2927	818	4555667
1174	13.5	0.5	0.0	chrX	142804720	142804911	(13235984)	C	L1PBa	LINE/L1	(6668)	195	3	4555667
604	31.8	7.0	1.6	chrX	143044137	143044379	(12996516)	C	MIRb	SINE/MIR	(8)	260	4	4556005
2777	7.4	0.6	0.0	chrX	143044463	143044815	(12996080)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4556006
274	22.7	6.2	1.3	chrX	143044828	143044903	(12995992)	+	L1ME4b	LINE/L1	222	301	(591)	4556007
438	29.9	2.6	2.6	chrX	143044922	143045110	(12995785)	+	L1ME4b	LINE/L1	355	543	(349)	4556007
2645	9.3	0.0	0.0	chrX	143128096	143128450	(12912445)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4556120
2384	25.5	4.0	8.8	chrX	143128451	143128884	(12912011)	C	L1MD2	LINE/L1	(532)	5827	5402	4556117
1648	17.6	0.9	0.3	chrX	143360918	143361242	(12679653)	C	L1MA2	LINE/L1	(0)	6304	5978	4556460
1757	15.6	6.0	1.6	chrX	143361243	143361606	(12679289)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4556461
1976	14.6	4.1	4.6	chrX	144790713	144791078	(11249817)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4558287
6946	11.5	1.5	0.7	chrX	144791079	144791258	(11249637)	+	L1MA1	LINE/L1	5666	5849	(1716)	4558285
13	25.1	0.0	2.3	chrX	149505177	149505220	(6535675)	+	(GCCGCA)n	Simple_repeat	1	44	(0)	4564708
3967	19.6	2.1	1.5	chrX	149764334	149764822	(6276073)	C	L1MC3	LINE/L1	(1459)	6326	5836	4565007
2731	9.0	0.0	1.1	chrX	149764823	149765181	(6275714)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	4565008
3967	19.6	2.1	1.5	chrX	149765182	149765554	(6275341)	C	L1MC3	LINE/L1	(1950)	5835	5459	4565007
685	29.9	12.6	3.9	chrX	151741464	151741794	(4299101)	C	L2b	LINE/L2	(2)	3373	3010	4568049
404	22.6	1.6	8.2	chrX	151742184	151742318	(4298577)	C	L2c	LINE/L2	(1)	3386	3261	4568050
28	0.0	0.0	0.0	chrX	153972940	153972965	(2067930)	+	(GCG)n	Simple_repeat	1	26	(0)	4570997
2459	8.6	0.0	1.8	chrX	154597187	154597532	(1443363)	+	THE1B	LTR/ERVL-MaLR	1	443	(22)	4572145
1618	15.9	4.1	0.9	chrX	154597533	154597855	(1443040)	+	MER61B	LTR/ERV1	1	427	(0)	4572146
797	29.5	12.3	2.4	chrX	155024414	155025003	(1015892)	C	L2a	LINE/L2	(43)	3383	2487	4572779
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
75	7.6	0.0	0.0	chrY	10687986	10688083	(46539332)	+	(ATTCC)n	Simple_repeat	1	98	(0)	4588000
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
301	17.0	0.0	0.0	chrY	10958417	10958463	(46268952)	C	AluYj4	SINE/Alu	(41)	270	224	4588520
226	15.8	0.0	5.0	chrY	10958430	10958469	(46268946)	+	SVA_F	Retroposon/SVA	332	369	(1006)	4588521
1259	23.0	0.4	0.6	chrY	10958474	10959925	(46267490)	+	(CATTC)n	Satellite	1	1451	(0)	4588522
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
294	21.8	0.0	0.0	chrY	11024506	11024560	(46202855)	C	AluYj4	SINE/Alu	(33)	278	224	4588731
320	23.8	1.6	0.5	chrY	11031071	11031156	(46196259)	C	AluY	SINE/Alu	(9)	293	208	4588745
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157