310	34.6	0.6	5.3	chr1	6246494	6246664	(242709758)	C	MamTip1	DNA/hAT-Tip100	(39)	228	66	7901
14	16.5	5.9	3.7	chr1	8026245	8026295	(240930127)	+	(TCGCGC)n	Simple_repeat	1	54	(0)	10773
17	11.2	0.0	0.0	chr1	8026302	8026330	(240930092)	+	(CCG)n	Simple_repeat	1	29	(0)	10774
3420	11.7	7.0	2.2	chr1	8266627	8267197	(240689225)	C	LTR24C	LTR/ERV1	(2)	633	24	11347
2152	11.9	1.6	7.8	chr1	8856159	8856381	(240100041)	+	THE1C	LTR/ERVL-MaLR	170	375	(0)	12404
385	27.4	13.8	3.5	chr1	8856382	8856441	(240099981)	+	L1ME1	LINE/L1	6108	6167	(12)	12387
205	29.7	1.3	6.3	chr1	8856957	8857035	(240099387)	C	MIR	SINE/MIR	(108)	154	80	12407
612	22.1	1.4	0.0	chr1	8858594	8858733	(240097689)	+	ERVL-B4-int	LTR/ERVL	5572	5713	(1)	12411
370	25.9	15.9	1.1	chr1	11682031	11682226	(237274196)	C	MIR	SINE/MIR	(0)	262	35	18226
213	31.9	18.3	0.0	chr1	11682235	11682328	(237274094)	C	MIR3	SINE/MIR	(46)	162	48	18227
810	8.7	0.0	4.2	chr1	11908152	11908271	(237048151)	+	U5	snRNA	1	115	(1)	18706
2339	7.6	3.6	1.7	chr1	17469853	17470153	(231486269)	+	AluSx1	SINE/Alu	6	312	(0)	29479
2802	15.3	1.1	7.7	chr1	17470154	17470521	(231485901)	C	MER34C_	LTR/ERV1	(214)	371	5	29477
20	24.4	0.0	4.4	chr1	19210179	19210246	(229746176)	+	(CCG)n	Simple_repeat	1	68	(0)	33227
413	29.1	5.2	1.6	chr1	23357604	23357732	(225598690)	+	MER135	DNA	23	156	(72)	42224
60	10.4	0.0	0.0	chr1	26282324	26282417	(222674005)	+	(GGACCG)n	Simple_repeat	1	94	(0)	48976
18	22.2	2.1	0.0	chr1	26472643	26472689	(222483733)	+	(GCC)n	Simple_repeat	1	48	(0)	49429
12	18.3	0.0	7.0	chr1	26960367	26960409	(221996013)	+	(CCCCCT)n	Simple_repeat	1	43	(0)	50561
15	27.5	6.7	0.0	chr1	27155046	27155120	(221801302)	+	(GCTCCA)n	Simple_repeat	1	80	(0)	51051
1845	0.0	0.0	0.0	chr1	28507365	28507571	(220448851)	+	U17	snRNA	1	207	(0)	54377
1953	8.2	3.7	4.6	chr1	28507601	28507904	(220448518)	C	AluSg	SINE/Alu	(8)	302	2	54378
1580	4.5	1.0	0.0	chr1	28508558	28508759	(220447663)	+	U17	snRNA	1	204	(3)	54380
523	28.9	6.8	0.0	chr1	28511132	28511292	(220445130)	+	MIR	SINE/MIR	34	206	(56)	54385
1926	12.2	0.3	4.3	chr1	28514997	28515300	(220441122)	+	AluSx	SINE/Alu	2	293	(19)	54399
742	12.3	16.9	4.5	chr1	28515301	28515434	(220440988)	+	AluSx3	SINE/Alu	133	292	(19)	54400
916	11.1	0.0	0.7	chr1	28515765	28515899	(220440523)	+	AluSx	SINE/Alu	1	134	(178)	54402
1972	8.8	0.0	0.4	chr1	28515900	28516162	(220440260)	+	AluSq2	SINE/Alu	1	262	(51)	54403
614	28.6	8.7	0.9	chr1	29182217	29182438	(219773984)	+	MIRb	SINE/MIR	28	268	(0)	56089
539	26.3	3.3	6.9	chr1	29182505	29182549	(219773873)	+	MIR	SINE/MIR	76	120	(142)	56090
2457	6.1	0.3	0.0	chr1	29182550	29182843	(219773579)	C	AluSx1	SINE/Alu	(17)	295	1	56091
489	29.6	6.3	1.8	chr1	31066099	31066276	(217890146)	+	MIRb	SINE/MIR	24	216	(52)	59680
203	31.5	10.5	0.0	chr1	31155650	31155760	(217800662)	+	MIRc	SINE/MIR	93	216	(52)	59977
19	15.5	3.7	3.6	chr1	32336172	32336255	(216620167)	+	(CTCCG)n	Simple_repeat	1	84	(0)	62647
3104	10.7	1.0	15.1	chr1	32438131	32438846	(216517576)	+	MER4B	LTR/ERV1	1	900	(0)	62839
279	27.6	12.8	1.5	chr1	32816718	32816919	(216139503)	+	L2c	LINE/L2	3107	3344	(31)	63793
1638	27.2	3.2	1.3	chr1	33050501	33050962	(215905460)	C	MLT1J	LTR/ERVL-MaLR	(7)	505	35	64338
2062	17.7	11.0	2.0	chr1	35173333	35173834	(213782588)	C	L1MB7	LINE/L1	(1117)	5029	4477	68178
387	18.5	0.0	9.0	chr1	35175709	35175797	(213780625)	C	Tigger7	DNA/TcMar-Tigger	(0)	2491	2411	68187
188	33.3	4.9	0.0	chr1	35930475	35930552	(213025870)	C	L2	LINE/L2	(528)	2891	2810	69780
20	22.5	0.0	6.6	chr1	36323645	36323653	(212632769)	+	(GGCGG)n	Simple_repeat	1	13	(63)	70647
2165	21.4	2.2	2.8	chr1	39711807	39712350	(209244072)	C	MER74A	LTR/ERVL	(17)	541	1	77270
1191	22.2	7.4	8.0	chr1	39712356	39712829	(209243593)	+	LTR50	LTR/ERVL	151	621	(174)	77269
443	29.7	11.9	3.7	chr1	42923231	42923608	(206032814)	C	L2	LINE/L2	(337)	3082	2670	83366
11	24.3	0.0	0.0	chr1	42925014	42925047	(206031375)	+	(CCCGCA)n	Simple_repeat	1	34	(0)	83369
833	31.4	2.9	0.4	chr1	42937520	42937756	(206018666)	+	MIR	SINE/MIR	10	252	(10)	83383
788	26.7	6.0	0.9	chr1	43650656	43650878	(205305544)	C	MIRb	SINE/MIR	(8)	260	26	84649
220	25.5	0.0	0.0	chr1	43660475	43660521	(205295901)	+	L2c	LINE/L2	3341	3387	(0)	84672
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
2230	10.4	0.3	2.2	chr1	52835756	52836073	(196120349)	+	AluSz	SINE/Alu	1	312	(0)	101868
685	15.0	6.6	0.0	chr1	62197513	62197625	(186758797)	C	AluJr	SINE/Alu	(189)	123	3	119704
1881	10.0	2.0	0.4	chr1	62197626	62197875	(186758547)	+	AluSx	SINE/Alu	30	283	(29)	119705
657	22.6	6.6	0.0	chr1	62198193	62198347	(186758075)	+	AluJr	SINE/Alu	141	306	(6)	119707
931	18.7	1.3	0.0	chr1	62198846	62199000	(186757422)	C	AluJr	SINE/Alu	(18)	294	138	119710
2512	5.2	0.0	0.0	chr1	62211684	62211972	(186744450)	+	AluY	SINE/Alu	1	289	(22)	119749
701	14.8	3.4	0.9	chr1	62212136	62212250	(186744172)	+	AluJb	SINE/Alu	16	133	(179)	119750
2009	12.8	0.7	0.7	chr1	62212503	62212792	(186743630)	+	AluSc	SINE/Alu	2	291	(18)	119751
12	22.5	2.7	0.0	chr1	63322195	63322231	(185634191)	+	G-rich	Low_complexity	1	38	(0)	121838
11	21.5	8.2	0.0	chr1	63322267	63322315	(185634107)	+	(CCCACG)n	Simple_repeat	1	53	(0)	121839
13	13.2	0.0	0.0	chr1	63322293	63322317	(185634105)	+	(CACC)n	Simple_repeat	1	25	(0)	121840
4509	15.6	2.1	1.5	chr1	63573892	63574886	(185381536)	C	HERVH-int	LTR/ERV1	(1526)	5003	3982	122282
652	28.4	10.3	0.4	chr1	85393530	85393755	(163562667)	+	MER34C_	LTR/ERV1	157	407	(178)	154102
1769	20.4	11.0	8.3	chr1	85393757	85394094	(163562328)	+	MER34B-int	LTR/ERV1	1208	1533	(3590)	154101
2595	15.2	2.9	3.9	chr1	94666404	94666979	(154289443)	C	MER4B-int	LTR/ERV1	(3734)	3024	2561	168110
302	15.1	0.0	1.9	chr1	94667046	94667099	(154289323)	C	MER34C_	LTR/ERV1	(373)	212	160	168111
857	27.6	4.0	4.0	chr1	96003598	96003918	(152952504)	+	Arthur1B	DNA/hAT-Tip100	72	392	(833)	170089
1058	25.7	8.2	10.5	chr1	104235158	104235683	(144720739)	C	MLT1F2	LTR/ERVL-MaLR	(3)	557	45	181475
2185	10.4	0.4	0.0	chr1	112911367	112911671	(136044751)	C	AluSx1	SINE/Alu	(0)	312	2	194039
580	29.3	5.7	10.2	chr1	114088249	114088563	(134867859)	+	MLT1I	LTR/ERVL-MaLR	112	411	(0)	196052
1273	6.1	0.0	1.8	chr1	120850818	120850985	(128105437)	C	U1	snRNA	(0)	165	1	206170
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1290	7.3	0.0	0.6	chr1	144551779	144551943	(104404479)	C	U1	snRNA	(1)	164	1	209607
254	25.6	9.4	2.0	chr1	144559990	144560154	(104396268)	C	LTR75	LTR/ERVL	(425)	183	4	209626
260	18.8	7.2	3.0	chr1	144560158	144560223	(104396199)	+	MER45B	DNA/hAT-Tip100	312	380	(660)	209627
1490	0.6	0.0	0.0	chr1	144560666	144560829	(104395593)	C	U1	snRNA	(1)	164	1	209628
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
1505	0.6	0.0	0.0	chr1	148038753	148038916	(100917506)	C	U1	snRNA	(1)	164	1	215030
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
739	28.4	24.2	0.8	chr1	149845290	149846031	(99110391)	C	L2a	LINE/L2	(60)	3366	2364	217844
668	1.4	0.0	0.0	chr1	153671250	153671323	(95285099)	+	tRNA-Met-i	tRNA	1	74	(1)	224506
12	17.5	3.1	0.0	chr1	153958498	153958529	(94997893)	+	(CTCC)n	Simple_repeat	1	33	(0)	225133
16	24.8	0.0	3.6	chr1	153958537	153958592	(94997830)	+	(GCCGCC)n	Simple_repeat	1	56	(0)	225134
2238	9.1	0.7	0.0	chr1	153976182	153976477	(94979945)	+	AluSx3	SINE/Alu	1	298	(13)	225162
754	29.1	5.0	7.0	chr1	156666463	156667035	(92289387)	+	L2b	LINE/L2	2814	3373	(2)	230539
2426	8.2	0.0	1.0	chr1	160990101	160990406	(87966016)	+	AluSq2	SINE/Alu	1	303	(10)	236639
5280	13.9	5.3	4.6	chr1	168258967	168260085	(80696337)	C	L1MA7	LINE/L1	(6)	6285	5157	248092
1561	16.6	0.0	2.5	chr1	173861613	173861847	(75094575)	+	AluSz6	SINE/Alu	1	229	(83)	256231
971	10.4	15.0	1.4	chr1	173861848	173861991	(75094431)	C	AluSz6	SINE/Alu	(68)	244	78	256232
2252	11.2	1.7	0.3	chr1	173862266	173862550	(75093872)	C	AluSg	SINE/Alu	(21)	289	1	256233
1835	12.8	8.4	0.7	chr1	173864937	173865210	(75091212)	+	AluSz	SINE/Alu	1	297	(15)	256237
12	12.2	3.7	0.0	chr1	182391717	182391743	(66564679)	+	GA-rich	Low_complexity	1	28	(0)	269390
54	11.6	2.8	2.7	chr1	183023087	183023194	(65933228)	+	(CCCTC)n	Simple_repeat	1	111	(0)	270460
2843	9.6	0.4	3.5	chr1	195848134	195848597	(53107825)	C	LTR7	LTR/ERV1	(0)	450	1	287928
399	29.2	6.9	3.0	chr1	204710333	204710498	(44245924)	C	MamGypLTR3a	LTR/Gypsy	(542)	439	267	302107
479	18.4	0.0	6.7	chr1	204710522	204710626	(44245796)	+	MER5A	DNA/hAT-Charlie	1	98	(91)	302109
46	2.3	0.0	0.0	chr1	209433148	209433191	(39523231)	+	(GT)n	Simple_repeat	1	44	(0)	309637
797	26.6	8.3	4.8	chr1	210373543	210373878	(38582544)	C	LTR82A	LTR/ERVL	(58)	814	466	311067
730	9.9	1.8	1.8	chr1	210374156	210374268	(38582154)	C	U5	snRNA	(2)	114	2	311068
25	19.3	0.0	0.0	chr1	211259429	211259481	(37696941)	+	(CCT)n	Simple_repeat	1	53	(0)	312389
3213	11.3	4.5	4.6	chr1	211398311	211398718	(37557704)	C	L1MA3	LINE/L1	(161)	6144	5716	312642
4716	3.5	0.7	0.2	chr1	211398720	211399312	(37557110)	+	MER11C	LTR/ERVK	476	1071	(0)	312644
1960	10.1	0.0	0.0	chr1	212894205	212894451	(36061971)	C	AluSc8	SINE/Alu	(63)	248	2	315397
12745	12.3	3.2	2.8	chr1	212894452	212894511	(36061911)	+	Tigger1	DNA/TcMar-Tigger	2344	2417	(1)	315394
314	33.3	12.1	2.4	chr1	212894515	212894766	(36061656)	+	L2c	LINE/L2	3054	3333	(54)	315398
2006	16.3	7.7	0.0	chr1	212897541	212897902	(36058520)	C	MSTB	LTR/ERVL-MaLR	(34)	392	1	315400
3404	6.0	0.0	0.7	chr1	212910008	212910445	(36045977)	+	LTR7	LTR/ERV1	1	435	(15)	315419
16898	8.8	2.7	1.6	chr1	212910475	212912921	(36043501)	+	HERVH-int	LTR/ERV1	521	2995	(4718)	315420
354	29.9	22.0	2.2	chr1	212967914	212968358	(35988064)	C	L2	LINE/L2	(723)	2696	2139	315516
574	29.9	4.0	0.5	chr1	212974817	212975008	(35981414)	+	MIRc	SINE/MIR	43	241	(27)	315528
402	31.0	7.6	4.5	chr1	212975002	212975180	(35981242)	C	MIRc	SINE/MIR	(45)	223	39	315529
335	27.7	9.9	2.8	chr1	212977201	212977341	(35979081)	+	MIR3	SINE/MIR	19	170	(38)	315532
190	27.7	1.5	1.5	chr1	212982815	212982880	(35973542)	C	L2c	LINE/L2	(39)	3348	3283	315535
1575	21.7	6.8	4.4	chr1	212983234	212983619	(35972803)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	315537
339	26.7	9.5	0.8	chr1	212983673	212983806	(35972616)	C	L2c	LINE/L2	(221)	3166	3014	315535
2324	10.4	0.7	0.0	chr1	212987294	212987602	(35968820)	+	AluSq	SINE/Alu	1	311	(2)	315544
2283	10.2	0.0	0.7	chr1	212993025	212993327	(35963095)	+	AluSx	SINE/Alu	1	301	(11)	315547
3786	11.1	5.2	0.7	chr1	223019273	223019854	(25936568)	+	MER4B	LTR/ERV1	1	610	(0)	330058
1413	19.8	9.1	3.5	chr1	223030313	223030906	(25925516)	C	LTR8A	LTR/ERV1	(55)	672	1	330065
607	24.5	10.5	6.7	chr1	232143887	232144232	(16812190)	+	Charlie7	DNA/hAT-Charlie	1501	1861	(751)	344564
689	24.8	3.4	12.9	chr1	234777884	234778114	(14178308)	C	MIR	SINE/MIR	(49)	213	8	348423
246	19.8	4.9	0.9	chr1	235078154	235078768	(13877654)	+	(TG)n	Simple_repeat	1	645	(0)	348979
2433	7.8	0.7	0.0	chr1	244845605	244845900	(4110522)	C	AluSq2	SINE/Alu	(13)	300	3	364899
12	6.3	8.1	5.0	chr1	248906545	248906581	(49841)	+	(GAGGCCG)n	Simple_repeat	1	40	(0)	370979
144	26.6	2.1	3.6	chr10	6785609	6786119	(127011303)	+	(AC)n	Simple_repeat	1	522	(0)	380072
1326	23.2	8.0	4.7	chr10	6786872	6787319	(127010103)	+	L1ME2	LINE/L1	5698	6161	(3)	380073
2374	10.1	0.0	0.0	chr10	13313934	13314241	(120483181)	C	AluSg	SINE/Alu	(2)	308	1	390535
2083	7.5	1.4	7.2	chr10	13314348	13314673	(120482749)	C	AluSp	SINE/Alu	(0)	313	7	390536
272	33.8	2.0	7.0	chr10	13314799	13314954	(120482468)	+	MamRTE1	LINE/RTE-BovB	2373	2520	(1292)	390537
834	1.0	1.0	0.0	chr10	13316585	13316684	(120480738)	C	L1PA4	LINE/L1	(0)	6155	6055	390540
246	26.0	5.7	4.8	chr10	13316743	13316847	(120480575)	C	MER5A	DNA/hAT-Charlie	(67)	122	17	390541
1834	14.6	1.4	1.4	chr10	13316891	13317178	(120480244)	C	AluSx	SINE/Alu	(24)	288	1	390542
1776	17.4	3.1	0.0	chr10	13319499	13319779	(120477643)	C	AluJb	SINE/Alu	(22)	290	1	390544
2111	14.4	0.0	1.3	chr10	13322134	13322445	(120474977)	C	AluSx	SINE/Alu	(4)	308	1	390551
339	35.0	9.1	0.0	chr10	13352769	13352928	(120444494)	C	MIRb	SINE/MIR	(0)	268	93	390604
550	23.6	7.2	6.3	chr10	13352929	13353150	(120444272)	C	LTR16E1	LTR/ERVL	(0)	538	315	390605
734	30.8	3.9	1.3	chr10	13395554	13395777	(120401645)	+	MIR	SINE/MIR	20	249	(13)	390714
248	5.4	0.0	26.3	chr10	13395788	13395824	(120401598)	C	L1MB4	LINE/L1	(0)	6180	6155	390715
2227	10.1	0.3	0.0	chr10	13395825	13396111	(120401311)	+	AluSp	SINE/Alu	9	296	(17)	390716
1756	28.8	4.0	1.0	chr10	16242686	16243201	(117554221)	+	L1MCa	LINE/L1	28	559	(5486)	395448
1580	19.6	5.2	0.3	chr10	21417555	21417850	(112379572)	+	AluJb	SINE/Alu	1	311	(1)	403644
4934	16.8	1.8	3.0	chr10	43012191	43013104	(90784318)	+	MER4D	LTR/ERV1	1	903	(0)	432856
489	19.6	4.5	1.8	chr10	43384027	43384135	(90413287)	+	PrimLTR79	LTR/ERV1	392	503	(0)	433393
274	17.6	0.0	1.9	chr10	43384139	43384190	(90413232)	C	ERV3-16A3_I-int	LTR/ERVL	(2465)	2761	2711	433394
589	21.8	5.3	2.1	chr10	43384196	43384340	(90413082)	C	MER58A	DNA/hAT-Charlie	(0)	224	75	433395
12471	10.7	1.7	2.7	chr10	44232714	44234189	(89563233)	C	L1PA8A	LINE/L1	(4935)	1548	56	434598
11	18.4	6.7	2.1	chr10	48306614	48306658	(85490764)	+	(GCGCGT)n	Simple_repeat	1	48	(0)	440378
1802	18.2	1.8	10.1	chr10	51910145	51910620	(81886802)	C	MER67D	LTR/ERV1	(78)	436	1	445586
31	3.3	0.0	0.0	chr10	51915536	51915566	(81881856)	+	(TG)n	Simple_repeat	1	31	(0)	445592
377	39.8	9.9	0.6	chr10	52030056	52030495	(81766927)	+	L2b	LINE/L2	2833	3324	(51)	445741
490	34.8	9.5	0.5	chr10	52032291	52032492	(81764930)	+	MIRb	SINE/MIR	28	249	(19)	445745
3466	5.8	0.0	0.7	chr10	52033757	52034207	(81763215)	C	LTR7	LTR/ERV1	(2)	448	1	445746
3499	5.6	0.0	1.3	chr10	53358813	53359266	(80438156)	C	LTR7	LTR/ERV1	(2)	448	1	447481
3173	16.9	5.2	7.1	chr10	53598865	53599578	(80197844)	+	LTR34	LTR/ERV1	1	699	(0)	447797
12	0.0	4.3	4.2	chr10	69123850	69123872	(64673550)	+	(TCCT)n	Simple_repeat	1	24	(0)	470925
43	0.0	0.0	0.0	chr10	71215807	71215843	(62581579)	+	(GT)n	Simple_repeat	1	37	(0)	474806
22	7.2	0.0	0.0	chr10	71657915	71657943	(62139479)	+	(AC)n	Simple_repeat	1	29	(0)	475685
3305	5.1	0.2	18.7	chr10	86865051	86865600	(46931822)	+	LTR7	LTR/ERV1	1	448	(2)	500307
6979	9.1	1.6	0.2	chr10	90301653	90302607	(43494815)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	505639
583	28.6	5.5	9.0	chr10	90925440	90925850	(42871572)	C	LTR82B	LTR/ERVL	(291)	539	144	506533
242	31.1	10.7	5.7	chr10	97434221	97434414	(36363008)	C	MIR	SINE/MIR	(0)	262	58	517981
1739	15.6	3.2	1.1	chr10	97434609	97434883	(36362539)	+	AluJr	SINE/Alu	7	287	(25)	517982
1611	12.3	12.9	5.6	chr10	97434910	97435194	(36362228)	+	AluSx	SINE/Alu	1	309	(3)	517983
582	23.0	12.1	0.0	chr10	99874457	99874608	(33922814)	C	MIR	SINE/MIR	(58)	204	32	522241
265	32.9	3.5	1.2	chr10	99874616	99874740	(33922682)	+	MIR3	SINE/MIR	24	148	(114)	522242
747	27.8	4.6	0.4	chr10	109934600	109934827	(23862595)	+	MIRb	SINE/MIR	31	268	(0)	538627
585	21.8	5.5	0.6	chr10	110163341	110163497	(23633925)	+	MER103C	DNA/hAT-Charlie	88	252	(45)	539007
302	27.8	1.0	3.0	chr10	110163459	110163558	(23633864)	C	MER103C	DNA/hAT-Charlie	(198)	99	2	539008
764	24.6	8.9	0.0	chr10	110163682	110163917	(23633505)	+	MER112	DNA/hAT-Charlie	3	261	(0)	539009
267	27.9	0.0	0.0	chr10	115996186	115996253	(17801169)	+	LTR104_Mam	LTR/Gypsy	116	183	(1326)	548154
412	18.0	1.1	4.9	chr10	117159579	117159709	(16637713)	+	Eulor2A	DNA?	5	121	(152)	549980
29	25.2	0.9	5.4	chr10	121598376	121598485	(12198937)	+	(GCC)n	Simple_repeat	1	111	(0)	557380
13	24.1	4.8	3.1	chr10	121927973	121928034	(11869388)	+	(GCC)n	Simple_repeat	1	65	(0)	557959
12	22.3	8.8	0.0	chr10	121928210	121928266	(11869156)	+	G-rich	Low_complexity	1	62	(0)	557960
1606	14.8	3.8	0.7	chr10	131966567	131966844	(1830578)	C	AluJo	SINE/Alu	(19)	293	7	571131
81	26.6	1.9	6.2	chr10	133243049	133243412	(554010)	+	(GT)n	Simple_repeat	1	371	(0)	572304
12	27.7	0.0	2.2	chr11	298577	298621	(134788001)	+	(GCA)n	Simple_repeat	1	45	(0)	573217
3159	18.1	5.8	7.9	chr11	311518	312224	(134774398)	C	LTR8	LTR/ERV1	(0)	691	1	573235
464	11.2	4.9	2.5	chr11	316555	316634	(134769988)	+	AluSz6	SINE/Alu	208	289	(23)	573240
409	21.7	4.2	2.5	chr11	316661	316778	(134769844)	C	LTR8A	LTR/ERV1	(263)	464	345	573241
987	15.0	1.5	1.0	chr11	317746	317940	(134768682)	+	MER50	LTR/ERV1	1	196	(538)	573243
1180	20.4	1.1	2.2	chr11	317945	318214	(134768408)	+	LTR8	LTR/ERV1	375	641	(50)	573244
1632	19.2	0.7	3.1	chr11	841425	841617	(134245005)	C	AluJb	SINE/Alu	(3)	309	126	574010
381	26.2	9.0	0.0	chr11	8688629	8688769	(126397853)	C	Charlie2a	DNA/hAT-Charlie	(1199)	1662	1508	584345
11	20.5	5.1	0.0	chr11	9461144	9461182	(125625440)	+	(CGGCTC)n	Simple_repeat	1	41	(0)	585847
2310	11.9	0.6	1.8	chr11	10511147	10511487	(124575135)	+	MER1B	DNA/hAT-Charlie	2	338	(1)	587648
211	37.2	4.7	3.0	chr11	11065411	11065579	(124021043)	+	L2b	LINE/L2	2791	2962	(457)	588611
941	12.4	9.1	5.6	chr11	18408552	18408631	(116677991)	C	MER30B	DNA/hAT-Charlie	(3)	187	116	600458
1661	14.3	3.4	5.7	chr11	18408632	18408932	(116677690)	+	AluSg	SINE/Alu	2	295	(15)	600459
459	18.9	1.9	5.4	chr11	18409032	18409108	(116677514)	C	L1MB7	LINE/L1	(57)	6127	6054	600460
1816	15.2	3.7	0.7	chr11	18409109	18409398	(116677224)	+	AluJb	SINE/Alu	1	299	(13)	600461
1011	19.5	4.4	4.3	chr11	22234760	22234975	(112851647)	+	MER92B	LTR/ERV1	165	370	(266)	606639
582	24.4	3.6	1.2	chr11	22235003	22235164	(112851458)	+	MER92B	LTR/ERV1	464	629	(7)	606639
2162	19.4	6.8	1.4	chr11	26523293	26523687	(108562935)	C	MER67C	LTR/ERV1	(265)	446	2	612603
483	33.9	11.1	2.2	chr11	27611491	27611810	(107474812)	+	L2c	LINE/L2	2910	3261	(126)	614266
2148	14.6	0.3	0.0	chr11	27614958	27615265	(107471357)	C	AluSz6	SINE/Alu	(1)	311	3	614274
593	22.0	10.7	9.9	chr11	27615266	27615399	(107471223)	C	L1MC5a	LINE/L1	(576)	2201	2056	614271
443	27.9	0.7	2.8	chr11	27615438	27615581	(107471041)	+	MIRb	SINE/MIR	95	235	(33)	614275
887	23.1	1.9	0.0	chr11	27623161	27623368	(107463254)	+	MIR	SINE/MIR	40	251	(11)	614285
231	39.0	9.1	0.0	chr11	27623380	27623589	(107463033)	+	L2b	LINE/L2	3104	3334	(41)	614286
47	2.3	0.0	0.0	chr11	27623756	27623800	(107462822)	+	(AC)n	Simple_repeat	1	45	(0)	614287
475	26.4	1.1	1.3	chr11	27627288	27627433	(107459189)	C	LTR88b	LTR/Gypsy?	(613)	249	94	614292
2170	14.8	0.3	0.0	chr11	27628632	27628942	(107457680)	C	AluSz6	SINE/Alu	(0)	312	1	614295
218	36.5	0.0	0.0	chr11	27628961	27629045	(107457577)	C	MIRb	SINE/MIR	(8)	260	176	614296
3716	3.6	0.2	0.2	chr11	27629072	27629519	(107457103)	C	LTR7	LTR/ERV1	(2)	448	1	614297
226	22.6	0.0	0.0	chr11	30025737	30025789	(105060833)	C	MLT1O	LTR/ERVL-MaLR	(0)	542	490	617838
369	21.9	16.7	3.4	chr11	45298809	45299012	(89787610)	+	MIR	SINE/MIR	37	262	(0)	641841
12	17.5	0.0	5.6	chr11	57649539	57649574	(77437048)	+	G-rich	Low_complexity	1	36	(0)	654196
656	1.4	0.0	0.0	chr11	59560335	59560407	(75526215)	C	tRNA-Lys-AAA	tRNA	(3)	73	1	656970
1365	9.9	0.0	6.1	chr11	62840903	62841036	(72245586)	+	AluSc8	SINE/Alu	1	130	(181)	662920
2337	9.2	0.0	0.3	chr11	62841037	62841341	(72245281)	+	AluSc	SINE/Alu	1	304	(5)	662921
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
1713	16.2	1.9	0.0	chr11	62850390	62850654	(72235968)	+	AluJb	SINE/Alu	19	288	(24)	662955
13	18.7	0.0	5.0	chr11	62855797	62855836	(72230786)	+	A-rich	Low_complexity	1	40	(0)	662962
865	23.3	16.6	1.6	chr11	62889665	62890031	(72196591)	C	MER77B	LTR/ERVL	(23)	677	245	663049
446	22.2	7.5	0.0	chr11	62890123	62890221	(72196401)	C	MER77B	LTR/ERVL	(593)	107	1	663049
359	24.0	20.5	1.2	chr11	62890234	62890406	(72196216)	C	L2a	LINE/L2	(549)	2870	2656	663048
732	27.6	12.2	10.9	chr11	63570381	63570833	(71515789)	C	L1ME3F	LINE/L1	(2586)	3560	3058	663894
634	14.8	0.0	0.0	chr11	63570834	63570921	(71515701)	C	AluJr	SINE/Alu	(219)	93	6	663904
732	27.6	12.2	10.9	chr11	63570922	63571389	(71515233)	C	L1ME3F	LINE/L1	(2586)	3057	2537	663894
14	18.4	6.6	4.6	chr11	63762143	63762203	(71324419)	+	(TCC)n	Simple_repeat	1	65	(0)	664330
27	23.1	3.4	2.2	chr11	63764004	63764092	(71322530)	+	(CTC)n	Simple_repeat	1	92	(0)	664334
931	13.4	0.0	0.0	chr11	64270649	64270782	(70815840)	+	FRAM	SINE/Alu	1	134	(42)	665282
37	0.0	0.0	0.0	chr11	64270901	64270932	(70815690)	+	(AC)n	Simple_repeat	1	32	(0)	665283
17	11.7	8.2	4.5	chr11	65027447	65027512	(70059110)	+	(GGCGGA)n	Simple_repeat	1	68	(0)	666697
1937	13.4	1.3	1.0	chr11	65506779	65507076	(69579546)	C	AluSx3	SINE/Alu	(12)	299	1	667666
352	22.7	5.8	1.0	chr11	67469596	67469693	(67616929)	C	MIRb	SINE/MIR	(83)	185	83	671696
241	20.4	0.0	0.0	chr11	67587144	67587183	(67499439)	C	MLT2B4	LTR/ERVL	(0)	556	517	671939
578	12.1	10.0	0.0	chr11	67587184	67587282	(67499340)	C	MER34	LTR/ERV1	(0)	542	433	671940
1489	10.5	0.0	0.0	chr11	67587283	67587482	(67499140)	+	AluSx1	SINE/Alu	1	200	(112)	671941
488	16.4	0.0	0.0	chr11	68460147	68460219	(66626403)	C	tRNA-Ala-GCY	tRNA	(2)	74	2	673466
13	8.2	3.9	0.0	chr11	68460278	68460303	(66626319)	+	(CCCCG)n	Simple_repeat	1	27	(0)	673467
17	23.4	0.0	6.0	chr11	72239933	72239999	(62846623)	+	(GGCCCG)n	Simple_repeat	1	67	(0)	679594
12	23.5	3.3	4.8	chr11	72239979	72240038	(62846584)	+	(GGCGGA)n	Simple_repeat	1	62	(0)	679595
242	31.2	4.1	1.1	chr11	75260555	75260648	(59825974)	C	MIRc	SINE/MIR	(50)	218	122	685653
632	25.6	12.4	0.5	chr11	75269621	75269844	(59816778)	C	MIR	SINE/MIR	(0)	268	10	685664
2248	11.8	0.0	0.0	chr11	77479603	77479907	(57606715)	C	AluSx1	SINE/Alu	(7)	305	1	689986
333	32.3	7.8	4.1	chr11	77479908	77480010	(57606612)	+	MLT1J	LTR/ERVL-MaLR	341	443	(69)	689985
12	24.0	4.5	0.0	chr11	77480069	77480112	(57606510)	+	(TGTTT)n	Simple_repeat	1	46	(0)	689987
234	37.5	5.9	0.0	chr11	84157718	84157829	(50928793)	+	L2c	LINE/L2	3253	3371	(16)	701854
640	17.0	7.5	3.6	chr11	93729191	93729330	(41357292)	+	AluJb	SINE/Alu	43	188	(124)	716062
300	21.9	2.1	0.0	chr11	93729331	93729392	(41357230)	+	AluJb	SINE/Alu	220	284	(17)	716062
455	13.5	8.6	26.0	chr11	94650011	94650210	(40436412)	+	MER51B	LTR/ERV1	1	162	(215)	717468
1713	16.2	4.2	1.0	chr11	94650208	94650507	(40436115)	+	MER51B	LTR/ERV1	68	377	(0)	717469
45941	10.3	2.1	2.0	chr11	94650510	94657040	(40429582)	+	HERV4_I-int	LTR/ERV1	1	6539	(0)	717469
492	17.7	4.8	2.8	chr11	94657041	94657173	(40429449)	+	MER51B	LTR/ERV1	1	138	(239)	717469
327	11.1	0.0	1.8	chr11	94657186	94657240	(40429382)	+	MER51B	LTR/ERV1	109	162	(215)	717469
1686	16.3	4.8	1.0	chr11	94657233	94657535	(40429087)	+	MER51B	LTR/ERV1	63	377	(0)	717470
14	21.5	5.4	1.7	chr11	96197524	96197579	(38889043)	+	(ATTTCTC)n	Simple_repeat	1	59	(0)	719782
468	29.9	13.7	5.5	chr11	96197647	96197972	(38888650)	C	L2c	LINE/L2	(29)	3358	3002	719783
259	29.5	6.5	0.0	chr11	100663924	100664052	(34422570)	C	LTR33A	LTR/ERVL	(3)	517	380	725312
211	34.3	4.2	4.2	chr11	104581250	104581392	(30505230)	+	L2b	LINE/L2	3031	3173	(202)	731078
8539	20.7	7.3	5.4	chr11	113847830	113849952	(21236670)	+	MER21-int	LTR/ERVL	919	3085	(1106)	745254
632	16.8	5.8	0.9	chr11	113849951	113850064	(21236558)	C	MER21-int	LTR/ERVL	(3013)	1178	1059	745255
1232	23.6	5.1	1.6	chr11	113850067	113850493	(21236129)	+	L1ME3D	LINE/L1	5435	5892	(231)	745256
1128	26.9	14.1	5.3	chr11	116445412	116445905	(18640717)	C	MamGypLTR2c	LTR/Gypsy	(522)	546	2	749330
2089	9.5	6.0	0.0	chr11	119416470	119416752	(15669870)	C	AluSz	SINE/Alu	(7)	305	5	754840
26	13.4	0.0	0.0	chr11	131424577	131424617	(3662005)	+	(T)n	Simple_repeat	1	41	(0)	773284
1856	8.4	0.4	4.0	chr11	131424618	131424867	(3661755)	C	AluY	SINE/Alu	(69)	242	2	773285
830	29.9	3.6	3.6	chr12	4630193	4630445	(128644864)	C	MIRb	SINE/MIR	(8)	260	8	785815
590	21.6	9.0	2.3	chr12	6215363	6215537	(127059772)	C	MER5A	DNA/hAT-Charlie	(1)	188	1	788253
13	19.6	0.0	0.0	chr12	6769610	6769639	(126505670)	+	GA-rich	Low_complexity	1	30	(0)	789352
21	12.9	4.5	2.2	chr12	6829271	6829314	(126445995)	+	(GT)n	Simple_repeat	1	46	(0)	789483
541	3.2	0.0	0.0	chr12	6943817	6943878	(126331431)	+	U7	snRNA	2	63	(0)	789678
887	24.2	15.1	6.9	chr12	7799161	7799578	(125475731)	C	LTR102_Mam	LTR/ERVL	(7)	844	387	791056
2153	11.7	1.0	0.0	chr12	7799950	7800239	(125475070)	+	AluSg	SINE/Alu	1	293	(17)	791058
717	9.0	5.1	0.0	chr12	7800355	7800465	(125474844)	C	HY1	scRNA	(0)	119	3	791059
1181	13.3	0.0	1.7	chr12	7802787	7802959	(125472350)	+	AluSx1	SINE/Alu	2	171	(141)	791068
1819	17.9	0.3	0.6	chr12	7803901	7804212	(125471097)	+	AluJr	SINE/Alu	2	312	(0)	791073
1810	23.6	18.8	4.2	chr12	7916935	7917439	(125357870)	+	LTR41B	LTR/ERVL	57	673	(85)	791375
1845	15.3	3.4	0.0	chr12	7917823	7918109	(125357200)	+	AluSq2	SINE/Alu	1	297	(16)	791378
353	24.2	11.1	2.4	chr12	7918195	7918317	(125356992)	C	L2	LINE/L2	(493)	2926	2792	791379
1532	14.8	1.0	13.6	chr12	7922027	7922364	(125352945)	C	AluSz	SINE/Alu	(17)	295	1	791385
1452	16.2	0.3	13.3	chr12	7923624	7923759	(125351550)	C	AluJo	SINE/Alu	(179)	133	1	791389
2236	11.1	0.3	0.0	chr12	7923769	7924066	(125351243)	C	AluSp	SINE/Alu	(13)	300	2	791391
2335	8.8	0.0	0.3	chr12	7928118	7928411	(125346898)	+	AluSc	SINE/Alu	1	293	(16)	791396
17	7.2	3.5	0.0	chr12	7928558	7928586	(125346723)	+	(TTCT)n	Simple_repeat	1	30	(0)	791397
2109	10.7	2.0	0.3	chr12	7929990	7930280	(125345029)	C	AluSp	SINE/Alu	(17)	296	1	791400
26	0.0	0.0	3.3	chr12	7936254	7936283	(125339026)	+	(CCCCA)n	Simple_repeat	1	30	(0)	791411
45242	4.2	0.5	0.2	chr12	8788669	8793938	(124481371)	+	HERV9NC-int	LTR/ERV1	1	5284	(834)	792907
2242	11.4	0.0	0.3	chr12	8797608	8797896	(124477413)	+	AluSx	SINE/Alu	1	289	(23)	792911
52	0.0	0.0	0.0	chr12	8797897	8797943	(124477366)	+	(AAAG)n	Simple_repeat	1	47	(0)	792912
1924	13.5	0.0	4.7	chr12	8797953	8798101	(124477208)	+	AluSz	SINE/Alu	146	282	(30)	792910
3069	13.5	7.6	5.5	chr12	8798267	8798870	(124476439)	C	L1MB1	LINE/L1	(1)	6167	5550	792914
1686	23.4	4.8	7.3	chr12	11608972	11609502	(121665807)	+	MER34C2	LTR/ERV1	35	551	(4)	796754
2450	11.7	0.0	0.3	chr12	14702379	14702686	(118572623)	+	AluSz	SINE/Alu	1	307	(5)	801786
1172	32.8	10.9	2.1	chr12	24590784	24591400	(108683909)	C	L3	LINE/CR1	(30)	4069	3392	815127
16	14.2	0.0	0.0	chr12	24591419	24591449	(108683860)	+	(TGTGTG)n	Simple_repeat	1	31	(0)	815128
19	22.1	5.1	3.6	chr12	25386118	25386196	(107889113)	+	(CGC)n	Simple_repeat	1	83	(0)	816427
377	31.1	2.9	0.8	chr12	30805921	30806053	(102469256)	+	Charlie4z	DNA/hAT-Charlie	2	137	(30)	824223
234	27.0	6.3	1.1	chr12	30806115	30806204	(102469105)	C	MIRb	SINE/MIR	(109)	159	65	824224
2047	13.9	0.0	0.7	chr12	32016739	32017033	(101258276)	C	AluSx1	SINE/Alu	(19)	293	1	826593
1341	25.8	5.3	2.8	chr12	32017034	32017337	(101257972)	C	LTR29	LTR/ERV1	(178)	444	137	826592
1957	17.1	0.3	0.7	chr12	39412437	39412735	(93862574)	+	AluJb	SINE/Alu	3	300	(12)	832393
313	25.8	3.8	9.2	chr12	46357773	46357913	(86917396)	+	MER5A	DNA/hAT-Charlie	35	167	(22)	842149
34	13.5	3.9	2.5	chr12	48350979	48351055	(84924254)	+	GA-rich	Low_complexity	1	80	(0)	845097
1586	13.6	7.8	1.5	chr12	54287615	54287879	(78987430)	C	AluSx1	SINE/Alu	(29)	283	1	856176
357	28.3	6.2	11.3	chr12	55746945	55747124	(77528185)	C	L2a	LINE/L2	(5)	3421	3217	858166
18	0.0	0.0	0.0	chr12	56117139	56117158	(77158151)	+	(T)n	Simple_repeat	1	20	(0)	858937
2041	9.4	0.4	1.1	chr12	59316425	59316691	(73958618)	C	AluSc	SINE/Alu	(44)	265	1	863953
994	27.2	6.7	8.8	chr12	59316861	59317271	(73958038)	C	L1MD2	LINE/L1	(69)	6290	5885	863954
343	24.9	10.3	1.9	chr12	59317631	59317790	(73957519)	C	LTR46	LTR/ERV1	(4)	456	282	863956
468	20.2	2.0	0.0	chr12	59317883	59317981	(73957328)	C	LTR46	LTR/ERV1	(359)	101	1	863956
2300	12.5	0.0	0.0	chr12	59318789	59319093	(73956216)	+	AluSg	SINE/Alu	1	305	(5)	863959
1198	29.4	5.4	3.7	chr12	59319094	59319273	(73956036)	C	L1MEf	LINE/L1	(5648)	552	367	863958
392	32.9	7.4	1.9	chr12	59320218	59320371	(73954938)	C	MIR3	SINE/MIR	(41)	167	9	863962
13	24.1	0.0	8.7	chr12	62659610	62659678	(70615631)	+	A-rich	Low_complexity	1	69	(0)	868277
192	22.5	12.1	3.6	chr12	64889424	64889506	(68385803)	C	X6B_LINE	LINE/CR1	(7)	1065	975	871947
323	30.1	12.9	6.0	chr12	71214862	71215077	(62060232)	+	MamSINE1	SINE/tRNA-RTE	22	254	(36)	882000
13	18.9	4.5	2.2	chr12	93571265	93571308	(39704001)	+	(CGGCG)n	Simple_repeat	1	46	(0)	913737
2514	16.5	2.2	4.8	chr12	112401998	112402499	(20872810)	C	L1MC2	LINE/L1	(212)	6132	5644	949120
2004	17.2	13.5	1.8	chr12	118120423	118120936	(15154373)	C	LTR29	LTR/ERV1	(38)	584	1	961899
16	23.9	2.9	4.2	chr12	122078733	122078801	(11196508)	+	(CGCCG)n	Simple_repeat	1	71	(0)	971060
20	25.1	2.3	4.5	chr12	122078969	122079055	(11196254)	+	(CCGCG)n	Simple_repeat	1	89	(0)	971061
587	8.3	0.0	0.0	chr12	124939966	124940037	(8335272)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	977201
2771	21.0	4.1	4.1	chr13	27257907	27258484	(87105844)	C	L1MD1	LINE/L1	(157)	6085	5514	1004598
14	26.4	3.7	0.0	chr13	27621849	27621902	(86742426)	+	(TCCT)n	Simple_repeat	1	56	(0)	1005252
1276	22.4	6.2	2.5	chr13	28439500	28439902	(85924426)	+	MLT1C	LTR/ERVL-MaLR	3	421	(46)	1006743
876	13.7	1.6	0.0	chr13	30457164	30457287	(83907041)	C	AluJr	SINE/Alu	(185)	127	2	1009732
481	24.8	2.4	0.4	chr13	30457417	30457537	(83906791)	+	FLAM_C	SINE/Alu	2	205	(97)	1009730
229	29.1	10.0	4.9	chr13	34900426	34900548	(79463780)	C	LTR104_Mam	LTR/Gypsy	(1318)	191	62	1016462
28128	1.3	0.0	0.5	chr13	39000818	39006875	(75357453)	C	L1PA2	LINE/L1	(3)	6152	126	1022035
469	19.6	22.0	5.6	chr13	40680531	40680692	(73683636)	C	MIR	SINE/MIR	(47)	215	2	1024499
2516	6.8	0.0	0.3	chr13	42861532	42861826	(71502502)	C	AluY	SINE/Alu	(17)	294	1	1028008
1142	21.9	6.3	7.8	chr13	45331097	45331190	(69033138)	+	MER39	LTR/ERV1	612	707	(0)	1032071
449	25.1	8.1	0.6	chr13	51181895	51182066	(63182262)	+	LTR16E2	LTR/ERVL	362	547	(21)	1041196
1101	27.5	11.7	1.7	chr13	51182079	51182485	(63181843)	C	L1M8	LINE/L1	(1791)	564	112	1041197
14	28.3	0.0	5.6	chr13	51452898	51452968	(62911360)	+	(GGAGTGG)n	Simple_repeat	1	71	(0)	1041603
228	7.8	3.3	1.6	chr13	55556202	55556568	(58807760)	+	(TTTC)n	Simple_repeat	1	379	(0)	1047320
235	35.3	10.8	0.0	chr13	55562115	55562230	(58802098)	+	MIRc	SINE/MIR	9	138	(130)	1047330
466	24.8	14.8	0.0	chr13	55570523	55570683	(58793645)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1047345
823	24.6	8.7	9.8	chr13	55571389	55571448	(58792880)	C	MER67D	LTR/ERV1	(203)	311	227	1047346
2042	14.1	8.2	0.9	chr13	55571449	55571785	(58792543)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1047347
1820	29.5	6.9	7.9	chr13	55576157	55578219	(58786109)	+	L1M2	LINE/L1	1	1756	(5453)	1047352
197	31.4	0.0	1.4	chr13	55652221	55652289	(58712039)	+	MIR1_Amn	SINE/MIR	109	178	(90)	1047440
1054	24.7	2.6	3.2	chr13	55652724	55653037	(58711291)	+	LTR12F	LTR/ERV1	208	519	(0)	1047441
2659	13.9	9.0	0.2	chr13	58680112	58680587	(55683741)	C	LTR22B1	LTR/ERVK	(4)	522	1	1051059
7159	25.3	5.7	6.3	chr13	64684702	64685515	(49678813)	C	L1MB8	LINE/L1	(5973)	894	13	1058854
777	26.4	5.5	2.5	chr13	71685178	71685422	(42678906)	+	MamTip2	DNA/hAT-Tip100	42	294	(11)	1067769
2271	18.4	3.2	1.4	chr13	86881614	86882048	(27482280)	+	MER87B	LTR/ERV1	1	443	(66)	1088262
1117	21.9	14.4	7.4	chr13	91359133	91359550	(23004778)	C	MLT1D	LTR/ERVL-MaLR	(42)	463	7	1094142
2446	13.3	11.2	0.4	chr13	92500186	92500654	(21863674)	C	LTR22B1	LTR/ERVK	(0)	526	1	1095658
3322	10.8	4.4	3.1	chr13	95954255	95954894	(18409434)	+	MER4B	LTR/ERV1	1	900	(0)	1100908
722	0.0	0.0	0.0	chr14	20610132	20610213	(86433505)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1128337
25	22.4	2.5	2.4	chr14	21092542	21092622	(85951096)	+	(GGCTGA)n	Simple_repeat	1	83	(0)	1129071
23	17.2	1.9	0.0	chr14	21092584	21092635	(85951083)	+	(GGCGGA)n	Simple_repeat	1	53	(0)	1129072
1838	16.4	6.2	3.3	chr14	21203852	21204211	(85839507)	C	THE1C	LTR/ERVL-MaLR	(4)	371	1	1129269
414	28.4	1.7	2.5	chr14	21529686	21529804	(85513914)	C	SVA_E	Retroposon/SVA	(1072)	310	193	1129936
626	17.5	1.9	0.0	chr14	21529813	21529915	(85513803)	+	MER5B	DNA/hAT-Charlie	50	154	(24)	1129937
15	16.9	4.0	3.9	chr14	23183710	23183759	(83859959)	+	(CCCTCCT)n	Simple_repeat	1	52	(0)	1132424
19	10.2	7.1	0.0	chr14	23306619	23306660	(83737058)	+	(AGCCC)n	Simple_repeat	1	45	(0)	1132674
398	22.8	0.0	0.0	chr14	23326844	23326937	(83716781)	C	FLAM_C	SINE/Alu	(217)	84	2	1132710
2296	8.6	4.4	1.6	chr14	38195700	38196078	(68847640)	+	HERVH-int	LTR/ERV1	7324	7713	(0)	1153970
3612	4.9	0.0	0.2	chr14	38196079	38196525	(68847193)	+	LTR7	LTR/ERV1	1	446	(4)	1153970
809	25.4	5.5	2.8	chr14	38198577	38198787	(68844931)	+	MIR	SINE/MIR	2	218	(44)	1153971
615	34.2	15.1	1.4	chr14	38201252	38201735	(68841983)	C	MER115	DNA/hAT-Tip100	(75)	618	57	1153975
650	28.9	12.4	0.3	chr14	38201882	38202221	(68841497)	+	L2a	LINE/L2	3032	3418	(8)	1153976
1732	18.2	0.3	1.4	chr14	38205512	38205795	(68837923)	+	AluJr	SINE/Alu	1	284	(28)	1153980
3678	17.1	2.2	3.4	chr14	38205925	38206670	(68837048)	C	L1MB5	LINE/L1	(0)	6174	5438	1153982
816	27.2	17.1	0.7	chr14	39187741	39188144	(67855574)	C	L2a	LINE/L2	(16)	3410	2927	1155307
3110	20.6	3.1	1.6	chr14	42335637	42336336	(64707382)	C	MER67C	LTR/ERV1	(0)	711	1	1159192
5454	6.2	6.3	0.1	chr14	45294678	45295410	(61748308)	+	MER4E1	LTR/ERV1	1	781	(0)	1163012
23	10.4	0.0	4.4	chr14	50231658	50231702	(56812016)	+	(CGG)n	Simple_repeat	1	45	(0)	1169572
187	21.0	0.0	10.1	chr14	53982789	53982857	(53060861)	C	L2a	LINE/L2	(1)	3425	3364	1175301
349	33.3	3.5	2.9	chr14	55642103	55642272	(51401446)	+	MIRb	SINE/MIR	58	228	(40)	1178059
501	13.3	1.1	1.1	chr14	56894821	56894911	(50148807)	C	MER5A1	DNA/hAT-Charlie	(18)	148	58	1179918
479	34.6	5.5	1.0	chr14	57714618	57714824	(49328894)	C	L2c	LINE/L2	(0)	3387	3171	1181112
22	3.0	0.0	7.5	chr14	68786346	68786385	(38257333)	+	(CCA)n	Simple_repeat	1	40	(0)	1198269
2577	4.0	0.3	0.3	chr14	77321602	77321898	(29721820)	+	AluY	SINE/Alu	1	297	(14)	1213988
16	9.6	2.7	5.3	chr14	81220663	81220699	(25823019)	+	GA-rich	Low_complexity	1	38	(0)	1220300
14	17.1	7.1	3.3	chr14	81220829	81220884	(25822834)	+	(CCGCTG)n	Simple_repeat	1	60	(0)	1220301
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
273	31.8	3.1	0.9	chr14	91454401	91454504	(15589214)	C	L2c	LINE/L2	(1)	3374	3266	1235713
2377	16.8	6.5	1.8	chr14	101945081	101945590	(5098128)	+	MER67B	LTR/ERV1	1	536	(125)	1253916
2030	14.4	0.7	0.0	chr15	25017125	25017409	(76973780)	+	AluSg	SINE/Alu	1	287	(23)	1269664
308	30.3	14.1	1.9	chr15	25017438	25017649	(76973540)	C	MLT1H-int	LTR/ERVL-MaLR	(241)	1168	927	1269665
5411	29.5	8.2	7.8	chr15	25140288	25143435	(76847754)	C	MER110-int	LTR/ERV1	(1317)	3330	171	1269756
1896	4.5	0.4	0.8	chr15	36285828	36286071	(65705118)	C	LTR7	LTR/ERV1	(207)	243	1	1285463
527	33.7	7.6	2.9	chr15	39795261	39795575	(62195614)	C	LTR78B	LTR/ERV1	(96)	1200	870	1290190
270	26.4	3.2	2.1	chr15	43800976	43801068	(58190121)	C	L1ME5	LINE/L1	(16)	6178	6085	1297651
16	9.9	0.0	5.6	chr15	62390426	62390476	(39600713)	+	(GCCGC)n	Simple_repeat	1	48	(0)	1326828
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
2073	4.4	0.7	12.4	chr15	65296541	65296879	(36694310)	+	AluY	SINE/Alu	4	302	(9)	1332325
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
706	12.5	0.0	1.8	chr15	65305005	65305116	(36686073)	+	AluSz	SINE/Alu	1	110	(202)	1332346
509	19.5	7.4	0.0	chr15	65305120	65305232	(36685957)	C	MER33	DNA/hAT-Charlie	(184)	140	19	1332347
638	4.0	0.0	0.0	chr15	65869059	65869133	(36122056)	C	tRNA-Gln-CAG	tRNA	(0)	75	1	1333537
3296	7.0	6.3	0.2	chr15	66470758	66471200	(35519989)	C	MER4A1	LTR/ERV1	(0)	472	1	1334767
261	23.5	3.4	2.3	chr15	71085901	71085987	(30905202)	C	MamRep605	LTR?	(631)	218	131	1343189
197	32.4	3.0	7.1	chr15	71203670	71203735	(30787454)	C	L2c	LINE/L2	(630)	2789	2732	1343350
193	33.9	0.0	0.0	chr15	71203761	71203822	(30787367)	C	L2b	LINE/L2	(2)	3373	3312	1343352
14	18.9	2.2	4.3	chr15	74598758	74598803	(27392386)	+	(GGAGCT)n	Simple_repeat	1	47	(0)	1349163
430	28.4	4.9	2.5	chr15	74760254	74760412	(27230777)	C	MLT1M	LTR/ERVL-MaLR	(402)	270	108	1349462
16	23.9	0.0	0.0	chr15	75201839	75201873	(26789316)	+	(C)n	Simple_repeat	1	35	(0)	1350396
20	13.2	0.0	4.4	chr15	75201874	75201881	(26789308)	+	(CGCCC)n	Simple_repeat	3	45	(0)	1350397
425	36.2	3.1	3.1	chr15	90583853	90584234	(11406955)	+	L4_C_Mam	LINE/RTE-X	568	949	(4189)	1376671
1765	33.0	4.1	4.1	chr15	91516740	91517469	(10473720)	C	ERVL-E-int	LTR/ERVL	(2883)	2784	2055	1378387
5216	14.5	2.7	1.1	chr15	92647427	92648313	(9342876)	+	MER4D	LTR/ERV1	3	903	(0)	1380160
207	12.5	4.0	0.0	chr16	726846	726893	(89611452)	C	L2b	LINE/L2	(198)	3177	3128	1395118
13	17.1	2.3	4.5	chr16	1771450	1771492	(88566853)	+	(CACCCGC)n	Simple_repeat	1	44	(0)	1396371
18	16.0	3.8	3.6	chr16	1771538	1771590	(88566755)	+	(GGCGG)n	Simple_repeat	1	55	(0)	1396372
17	15.3	2.7	0.0	chr16	2251462	2251498	(88086847)	+	(CCCGGC)n	Simple_repeat	1	38	(0)	1397109
15	24.9	0.0	3.9	chr16	2268061	2268111	(88070234)	+	(CCG)n	Simple_repeat	1	51	(0)	1397131
15	21.8	0.0	8.7	chr16	3028141	3028215	(87310130)	+	(CGGCG)n	Simple_repeat	1	68	(0)	1398353
235	33.3	9.1	4.5	chr16	3087795	3087973	(87250372)	+	L2	LINE/L2	2681	2868	(551)	1398464
3108	19.9	2.2	4.4	chr16	3554605	3554947	(86783398)	+	L1MB5	LINE/L1	5478	5818	(356)	1399378
215	29.0	9.9	4.6	chr16	8983693	8983844	(81354501)	+	MIRb	SINE/MIR	42	202	(66)	1410230
12	4.3	8.3	0.0	chr16	11256035	11256058	(79082287)	+	(CCCT)n	Simple_repeat	1	26	(0)	1415250
476	25.5	4.2	1.2	chr16	19854069	19854231	(70484114)	+	MER5B	DNA/hAT-Charlie	8	175	(3)	1434517
651	17.5	2.1	2.8	chr16	19854237	19854377	(70483968)	C	MER5A	DNA/hAT-Charlie	(0)	189	50	1434518
370	35.0	4.3	1.3	chr16	22298460	22298618	(68039727)	C	MIR	SINE/MIR	(97)	165	2	1439787
584	28.9	1.8	11.0	chr16	23280113	23280210	(67058135)	C	MIRb	SINE/MIR	(20)	248	168	1441872
1557	22.2	7.6	4.8	chr16	29680256	29680515	(60657830)	C	LTR14C	LTR/ERVK	(322)	265	11	1456282
332	24.3	2.7	7.0	chr16	29680576	29680658	(60657687)	+	MIRc	SINE/MIR	84	166	(102)	1456284
2228	10.8	0.0	1.3	chr16	30072789	30073095	(60265250)	C	AluSx	SINE/Alu	(9)	303	1	1457205
18	7.7	0.0	0.0	chr16	30698185	30698212	(59640133)	+	(GTG)n	Simple_repeat	1	28	(0)	1458687
12	28.1	3.9	0.0	chr16	30775721	30775772	(59562573)	+	(CTGGCG)n	Simple_repeat	1	54	(0)	1458832
11	19.1	5.9	3.7	chr16	30775915	30775965	(59562380)	+	G-rich	Low_complexity	1	54	(0)	1458833
1676	13.5	4.0	6.4	chr16	31134708	31134901	(59203444)	+	AluJb	SINE/Alu	134	308	(4)	1459676
267	24.1	8.1	0.0	chr16	31134919	31134997	(59203348)	+	MIRb	SINE/MIR	37	122	(146)	1459678
318	32.5	0.0	0.0	chr16	31199011	31199093	(59139252)	C	MIR	SINE/MIR	(176)	86	4	1459823
20	21.6	0.0	0.0	chr16	51238111	51238149	(39100196)	+	A-rich	Low_complexity	1	39	(0)	1474004
358	19.7	10.2	0.8	chr16	57300190	57300285	(33038060)	+	AluJb	SINE/Alu	209	293	(9)	1484767
3366	4.0	0.0	10.6	chr16	59514911	59515411	(30822934)	C	LTR7	LTR/ERV1	(2)	448	1	1488985
501	32.6	2.3	0.0	chr16	65224153	65224324	(25114021)	C	MIRb	SINE/MIR	(18)	250	75	1497621
471	34.8	2.7	1.1	chr16	65224819	65225001	(25113344)	C	MIRb	SINE/MIR	(56)	212	27	1497624
340	33.0	9.7	3.7	chr16	65226054	65226295	(25112050)	+	L2	LINE/L2	2483	2740	(679)	1497627
3674	5.4	0.2	0.7	chr16	65234900	65235349	(25102996)	C	LTR7	LTR/ERV1	(2)	448	1	1497635
275	15.8	1.0	0.0	chr16	68763433	68763484	(21574861)	C	MIRc	SINE/MIR	(50)	158	105	1504284
2197	8.8	0.0	5.6	chr16	70379633	70379937	(19958408)	C	AluSz	SINE/Alu	(23)	289	2	1507864
774	18.7	0.0	8.2	chr16	70611869	70612039	(19726306)	+	AluJb	SINE/Alu	137	293	(19)	1508378
1222	18.6	7.5	0.4	chr16	71426948	71427184	(18911161)	+	AluJb	SINE/Alu	1	255	(57)	1509673
18	20.7	4.2	4.0	chr16	74606844	74606915	(15731430)	+	(TGCTGA)n	Simple_repeat	1	75	(0)	1515037
12	26.5	5.0	1.6	chr16	74985009	74985068	(15353277)	+	(CGC)n	Simple_repeat	1	63	(0)	1515869
5500	7.9	2.7	2.2	chr16	77992162	77992913	(12345432)	C	MER4E1	LTR/ERV1	(20)	761	1	1520905
2049	9.9	0.0	3.8	chr16	89240660	89240833	(1097512)	+	AluSz	SINE/Alu	117	281	(31)	1540965
449	34.6	8.4	7.2	chr16	89240834	89240911	(1097434)	+	L1MEf	LINE/L1	5357	5425	(1119)	1540956
16	18.4	7.9	1.5	chr17	7262511	7262573	(75994868)	+	G-rich	Low_complexity	1	68	(0)	1558514
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
779	1.2	0.0	0.0	chr17	8226607	8226691	(75030750)	C	tRNA-Ser-TCY	tRNA	(0)	85	1	1560366
654	1.4	0.0	0.0	chr17	8226991	8227064	(75030377)	C	tRNA-Ile-ATT	tRNA	(3)	74	1	1560367
17	22.1	0.0	0.0	chr17	17700621	17700662	(65556779)	+	GA-rich	Low_complexity	1	42	(0)	1577188
17	22.4	6.6	2.5	chr17	21042840	21042924	(62214517)	+	(CGG)n	Simple_repeat	1	88	(0)	1583516
13	15.2	0.0	3.2	chr17	28744082	28744112	(54513329)	+	(CCCG)n	Simple_repeat	1	31	(0)	1589232
17	25.1	0.0	4.8	chr17	28897639	28897700	(54359741)	+	(CGCC)n	Simple_repeat	1	62	(0)	1589579
431	24.8	5.7	1.3	chr17	33193009	33193159	(50064282)	+	MamRep434	DNA/TcMar-Tigger	102	259	(167)	1598148
2319	8.4	0.7	0.7	chr17	38846349	38846646	(44410795)	C	AluY	SINE/Alu	(13)	298	1	1608718
986	16.2	5.9	0.0	chr17	38846649	38846808	(44410633)	C	AluJr	SINE/Alu	(14)	298	129	1608719
255	22.2	0.0	1.1	chr17	38846837	38846909	(44410532)	C	7SLRNA	srpRNA	(265)	55	11	1608720
641	2.7	0.0	0.0	chr17	39153733	39153805	(44103636)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609432
371	23.4	4.1	2.1	chr17	41692484	41692579	(41564862)	+	Tigger3a	DNA/TcMar-Tigger	1	98	(250)	1614057
514	21.3	10.4	4.6	chr17	41693148	41693358	(41564083)	C	MSTD	LTR/ERVL-MaLR	(30)	435	81	1614060
1381	14.8	10.3	4.6	chr17	41693359	41693641	(41563800)	+	AluJb	SINE/Alu	1	301	(11)	1614061
19	28.9	5.4	0.0	chr17	42833431	42833522	(40423919)	+	(GCGA)n	Simple_repeat	1	97	(0)	1616449
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
2536	15.1	6.7	0.4	chr17	53061416	53061906	(30195535)	+	LTR22B1	LTR/ERVK	1	524	(2)	1636245
3119	7.0	0.0	10.8	chr17	54345638	54346137	(28911304)	+	LTR7	LTR/ERV1	1	446	(4)	1637956
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
46	18.2	7.5	1.9	chr17	72150962	72151009	(11106432)	+	GA-rich	Low_complexity	1	152	(0)	1669883
599	4.1	0.0	0.0	chr17	75035113	75035185	(8222256)	+	tRNA-Arg-CGG	tRNA	1	73	(3)	1675215
192	36.5	6.7	4.1	chr17	78352118	78352277	(4905164)	+	MIRc	SINE/MIR	2	162	(106)	1681713
210	34.7	16.6	2.0	chr17	79932247	79932640	(3324801)	C	L3b	LINE/CR1	(229)	5003	4541	1684193
359	31.8	4.9	0.0	chr17	81508816	81508991	(1748450)	C	L1M5	LINE/L1	(622)	5572	5388	1686351
15	24.0	5.6	2.6	chr17	81868823	81868894	(1388547)	+	(TCCG)n	Simple_repeat	1	76	(0)	1686844
1914	17.6	0.0	0.7	chr18	4119092	4119393	(76253892)	C	AluJo	SINE/Alu	(12)	300	1	1695574
37	23.7	1.1	8.9	chr18	11981285	11981472	(68391813)	+	G-rich	Low_complexity	1	190	(0)	1706731
18	9.4	0.0	5.3	chr18	12883964	12884001	(67489284)	+	(GCGAGAG)n	Simple_repeat	1	38	(0)	1708293
20	3.0	2.6	5.1	chr18	12884216	12884253	(67489032)	+	(GCGCTGC)n	Simple_repeat	1	39	(0)	1708294
42	0.0	0.0	0.0	chr18	27561594	27561629	(52811656)	+	(GT)n	Simple_repeat	1	36	(0)	1722572
184	31.7	0.0	3.2	chr18	28287254	28287315	(52085970)	+	MIRb	SINE/MIR	7	66	(202)	1723552
1418	15.0	7.7	8.3	chr18	30763973	30764285	(49609000)	+	MER67D	LTR/ERV1	1	311	(203)	1726772
686	30.7	13.9	1.0	chr18	37489892	37490372	(42882913)	+	L1ME3G	LINE/L1	356	908	(16)	1736119
1089	24.4	10.2	4.5	chr18	41464073	41464541	(38908744)	C	MER110A	LTR/ERV1	(11)	480	1	1741418
952	24.4	11.0	0.8	chr18	60804405	60804672	(19568613)	C	MER67C	LTR/ERV1	(337)	374	76	1771001
1000	29.3	10.3	7.4	chr18	66271855	66272566	(14100719)	C	LTR68	LTR/ERV1	(0)	740	6	1778943
2630	20.3	9.8	1.1	chr18	69705855	69706502	(10666783)	C	MER67C	LTR/ERV1	(0)	711	1	1783562
24	14.8	1.9	1.8	chr19	1275563	1275616	(57342000)	+	(TGCTGC)n	Simple_repeat	1	55	(0)	1798487
307	25.0	19.4	0.0	chr19	1445568	1445671	(57171945)	+	L2c	LINE/L2	3288	3423	(3)	1798791
346	20.4	10.6	0.0	chr19	3434692	3434784	(55182832)	+	MIRb	SINE/MIR	87	190	(78)	1803275
211	39.3	3.9	0.0	chr19	3434802	3434923	(55182693)	+	MIR3	SINE/MIR	38	164	(44)	1803276
646	1.4	0.0	0.0	chr19	4724070	4724141	(53893475)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1806264
1937	7.9	0.3	12.5	chr19	4724169	4724496	(53893120)	C	AluSx	SINE/Alu	(14)	298	11	1806265
11	24.2	2.6	0.0	chr19	5720827	5720865	(52896751)	+	G-rich	Low_complexity	1	40	(0)	1808644
416	33.0	9.3	2.2	chr19	7521948	7522306	(51095310)	C	L2b	LINE/L2	(470)	2949	2563	1813138
3509	18.3	5.5	8.7	chr19	8265496	8265735	(50351881)	+	L1MB5	LINE/L1	5496	5744	(430)	1814852
1705	16.1	1.1	0.4	chr19	8265736	8266002	(50351614)	+	AluJo	SINE/Alu	13	281	(31)	1814857
12	22.0	4.8	4.5	chr19	8444846	8444908	(50172708)	+	G-rich	Low_complexity	1	66	(0)	1815352
14	26.3	0.0	0.0	chr19	8445001	8445041	(50172575)	+	(GGC)n	Simple_repeat	1	41	(0)	1815353
15	17.7	1.7	8.2	chr19	12946025	12946084	(45671532)	+	G-rich	Low_complexity	1	61	(0)	1825594
14	18.2	2.6	2.5	chr19	14518366	14518404	(44099212)	+	(CCG)n	Simple_repeat	1	40	(0)	1829698
12	11.9	4.8	6.8	chr19	14518474	14518515	(44099101)	+	(CCG)n	Simple_repeat	1	44	(0)	1829699
2119	9.1	1.4	0.7	chr19	18278412	18278698	(40338918)	+	AluSz	SINE/Alu	1	289	(23)	1838522
237	19.2	1.9	3.7	chr19	18278768	18278821	(40338795)	+	MIR	SINE/MIR	122	174	(88)	1838523
230	24.4	0.0	0.0	chr19	18429973	18430017	(40187599)	+	MIRc	SINE/MIR	84	128	(140)	1838881
1926	9.2	5.9	5.9	chr19	18590215	18590518	(40027098)	C	AluSz6	SINE/Alu	(6)	306	3	1839179
2000	14.2	1.0	1.3	chr19	18831382	18831514	(39786102)	C	AluJb	SINE/Alu	(176)	136	1	1839686
220	14.7	0.0	0.0	chr19	18831566	18831599	(39786017)	C	MIR3	SINE/MIR	(60)	148	115	1839688
208	22.5	0.0	0.0	chr19	18831568	18831607	(39786009)	C	MIRc	SINE/MIR	(119)	149	110	1839689
2204	19.8	1.9	9.6	chr19	28880916	28881480	(29736136)	+	MER41C	LTR/ERV1	1	521	(0)	1849374
194	29.0	3.1	6.1	chr19	29368046	29368111	(29249505)	C	MER131	DNA?	(126)	89	26	1850128
12	18.0	10.0	0.0	chr19	33302503	33302552	(25315064)	+	(CGCCCG)n	Simple_repeat	1	55	(0)	1856556
489	29.4	9.2	2.7	chr19	35029573	35029907	(23587709)	C	L2a	LINE/L2	(158)	3268	2910	1859546
41	2.6	0.0	0.0	chr19	36838107	36838146	(21779470)	+	(CA)n	Simple_repeat	1	40	(0)	1863352
781	23.1	5.5	3.6	chr19	37695520	37695866	(20921750)	C	MER67C	LTR/ERV1	(250)	411	135	1864919
2283	10.5	0.0	0.0	chr19	37695867	37696160	(20921456)	C	AluSx1	SINE/Alu	(17)	295	2	1864921
18	25.9	4.2	2.7	chr19	38647566	38647637	(19969979)	+	(GC)n	Simple_repeat	1	75	(0)	1867185
299	28.3	8.9	4.2	chr19	41872376	41872493	(16745123)	+	MIRb	SINE/MIR	22	145	(123)	1874090
2145	12.0	1.3	0.0	chr19	41872616	41872914	(16744702)	+	AluSp	SINE/Alu	1	303	(10)	1874091
237	33.3	14.5	0.7	chr19	41872940	41873081	(16744535)	C	MIR	SINE/MIR	(85)	177	13	1874092
181	33.0	13.8	0.0	chr19	41873514	41873613	(16744003)	C	MIRb	SINE/MIR	(34)	234	119	1874093
993	26.9	7.4	2.0	chr19	42032266	42032622	(16584994)	+	L1ME3G	LINE/L1	169	546	(378)	1874420
662	28.4	14.5	8.7	chr19	42032624	42032989	(16584627)	+	L2b	LINE/L2	2407	2823	(596)	1874421
1939	24.9	11.6	9.5	chr19	46132077	46133206	(12484410)	C	HERV35I-int	LTR/ERV1	(5736)	1182	26	1882995
2390	8.1	0.0	0.3	chr19	46772800	46773096	(11844520)	C	AluY	SINE/Alu	(15)	296	1	1884506
1399	25.7	9.2	6.2	chr19	46773097	46773475	(11844141)	C	L1ME2	LINE/L1	(170)	5994	5604	1884505
26	0.0	0.0	0.0	chr19	47226328	47226352	(11391264)	+	(CCCTGG)n	Simple_repeat	1	25	(0)	1885597
32	3.2	0.0	0.0	chr19	47472195	47472226	(11145390)	+	(AC)n	Simple_repeat	1	32	(0)	1886247
276	34.5	12.9	1.0	chr19	48618533	48618737	(9998879)	C	MIRb	SINE/MIR	(2)	266	34	1889228
391	33.1	5.3	0.0	chr19	48618825	48618966	(9998650)	+	MIR	SINE/MIR	2	151	(111)	1889229
1745	11.7	1.2	0.4	chr19	48967178	48967426	(9650190)	+	AluSp	SINE/Alu	43	293	(20)	1890081
232	22.6	2.6	0.0	chr19	49557280	49557344	(9060272)	C	MIR1_Amn	SINE/MIR	(92)	170	108	1891390
599	29.2	6.0	1.5	chr19	49557421	49557625	(9059991)	+	MIR	SINE/MIR	37	251	(11)	1891391
453	25.8	2.4	0.8	chr19	51888833	51888957	(6728659)	C	L2a	LINE/L2	(0)	3426	3300	1896427
6569	11.8	0.7	0.9	chr19	51905692	51906661	(6710955)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	1896459
1656	14.9	8.2	0.0	chr19	52500404	52500671	(6116945)	C	AluSz	SINE/Alu	(9)	303	12	1897568
2355	11.0	12.8	4.9	chr19	52500672	52500851	(6116765)	C	MER4A1	LTR/ERV1	(304)	168	5	1897567
1327	14.9	4.2	0.0	chr19	53837351	53837558	(4780058)	+	AluJb	SINE/Alu	91	307	(5)	1900381
428	23.3	11.7	0.0	chr19	55461195	55461323	(3156293)	+	MIRc	SINE/MIR	41	186	(82)	1903779
477	13.1	0.0	2.3	chr19	58009991	58010086	(607530)	+	FLAM_C	SINE/Alu	1	72	(61)	1908697
1168	9.7	1.9	0.0	chr19	58010128	58010282	(607334)	C	AluSq2	SINE/Alu	(56)	257	100	1908698
17	18.7	6.2	6.8	chr19	58305442	58305538	(312078)	+	(AGTGGTG)n	Simple_repeat	1	103	(0)	1909308
390	17.2	4.3	3.3	chr2	3527266	3528294	(238665235)	+	(TGGTGTG)n	Simple_repeat	1	1073	(0)	1914586
524	32.5	12.2	5.5	chr2	5913667	5914074	(236279455)	C	L2c	LINE/L2	(186)	3240	2790	1917778
15	21.9	0.0	2.3	chr2	23940659	23940702	(218252827)	+	G-rich	Low_complexity	1	44	(0)	1945146
3422	19.1	10.9	0.4	chr2	30651824	30652636	(211540893)	+	L1MC4a	LINE/L1	6903	7811	(71)	1957358
281	33.0	5.6	3.8	chr2	36753876	36754086	(205439443)	+	MIRc	SINE/MIR	32	246	(22)	1966475
183	24.0	8.6	9.4	chr2	37657191	37657296	(204536233)	+	L2c	LINE/L2	3052	3156	(231)	1968052
16	14.9	7.9	0.0	chr2	44680816	44680853	(197512676)	+	GA-rich	Low_complexity	1	41	(0)	1979598
378	32.1	12.2	0.5	chr2	49291531	49291718	(192901811)	C	L1M5	LINE/L1	(1185)	4961	4749	1987245
2635	28.6	10.7	2.0	chr2	49291741	49292763	(192900766)	+	L2	LINE/L2	1906	3027	(392)	1987246
1562	23.4	7.7	7.2	chr2	51662037	51662593	(190530936)	+	MER34C_	LTR/ERV1	26	585	(0)	1990337
2602	16.1	12.6	1.1	chr2	52311688	52312213	(189881316)	C	LTR49	LTR/ERV1	(0)	595	1	1991124
613	15.6	6.8	0.0	chr2	61475822	61475930	(180717599)	C	FLAM_C	SINE/Alu	(22)	121	5	2004406
609	19.1	2.1	4.1	chr2	61475932	61476078	(180717451)	C	AluJo	SINE/Alu	(33)	279	136	2004407
403	20.0	0.0	0.0	chr2	61476079	61476143	(180717386)	C	AluJo	SINE/Alu	(110)	202	138	2004408
282	24.1	0.0	11.7	chr2	61476085	61476178	(180717351)	+	SVA_B	Retroposon/SVA	133	215	(1168)	2004409
3385	6.3	0.7	0.2	chr2	63847467	63847912	(178345617)	C	LTR7	LTR/ERV1	(2)	448	1	2008440
344	32.4	4.8	1.1	chr2	74459360	74459540	(167733989)	C	L3	LINE/CR1	(185)	3914	3727	2025433
3688	15.8	2.7	0.3	chr2	75869834	75870521	(166323008)	C	MER67C	LTR/ERV1	(0)	711	7	2027636
5028	18.4	5.5	0.8	chr2	77094031	77095495	(165098034)	+	L1M2	LINE/L1	4197	5736	(555)	2029185
2156	10.5	0.0	2.3	chr2	77095509	77095812	(165097717)	C	AluSz6	SINE/Alu	(15)	297	1	2029186
287	9.6	11.9	0.0	chr2	77095814	77095865	(165097664)	+	L1M2	LINE/L1	5802	5860	(445)	2029185
1097	20.1	4.3	0.4	chr2	77095892	77096161	(165097368)	+	L1MA7	LINE/L1	6007	6287	(4)	2029187
1189	30.7	6.9	3.4	chr2	77098180	77099600	(165093929)	+	L1ME3C	LINE/L1	4644	6115	(8)	2029182
449	27.7	8.8	1.7	chr2	77100031	77100210	(165093319)	C	Tigger10	DNA/TcMar-Tigger	(275)	1569	1376	2029188
1696	14.4	0.2	3.3	chr2	80458859	80459222	(161734307)	+	Tigger3c	DNA/TcMar-Tigger	2	579	(23)	2033786
278	23.5	3.9	2.0	chr2	80459225	80459324	(161734205)	C	MER5B	DNA/hAT-Charlie	(75)	103	2	2033787
1953	21.1	6.7	6.2	chr2	83284112	83284615	(158908914)	+	MER67D	LTR/ERV1	8	514	(0)	2037469
286	29.0	7.6	8.8	chr2	84907528	84907690	(157285839)	C	L2c	LINE/L2	(17)	3370	3182	2039636
202	28.4	9.9	7.2	chr2	84959768	84959934	(157233595)	C	L2c	LINE/L2	(2)	3385	3214	2039778
255	31.7	1.0	2.9	chr2	84959944	84960047	(157233482)	C	MER5B	DNA/hAT-Charlie	(2)	176	75	2039779
533	23.6	2.4	1.5	chr2	84965225	84965366	(157228163)	+	MIR	SINE/MIR	33	183	(47)	2039793
15	16.9	10.6	0.0	chr2	85539084	85539130	(156654399)	+	(GC)n	Simple_repeat	1	52	(0)	2040998
12	16.6	4.5	4.3	chr2	85539144	85539187	(156654342)	+	(CCGCG)n	Simple_repeat	1	46	(0)	2040999
1873	11.4	5.2	0.0	chr2	85546437	85546707	(156646822)	+	AluSx1	SINE/Alu	3	288	(24)	2041003
923	20.9	0.0	1.6	chr2	88016358	88016547	(154176982)	C	U2	snRNA	(1)	187	1	2045132
830	34.4	10.5	3.2	chr2	97770712	97771613	(144421916)	+	L4_C_Mam	LINE/RTE-X	2845	3819	(1319)	2054119
2505	5.7	0.0	4.1	chr2	101009112	101009429	(141184100)	+	AluY	SINE/Alu	1	305	(6)	2058843
2343	16.8	3.8	0.7	chr2	117289301	117289713	(124903816)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2082108
13281	18.8	2.9	2.5	chr2	117289714	117290024	(124903505)	+	L1MA4	LINE/L1	6288	6599	(963)	2082098
1465	23.4	4.2	8.2	chr2	121680216	121680336	(120513193)	C	LTR23-int	LTR/ERV1	(3782)	1341	1225	2089100
450	30.3	6.2	1.8	chr2	121680337	121680504	(120513025)	C	MER34C	LTR/ERV1	(156)	395	220	2089104
16	13.7	0.0	0.0	chr2	124046425	124046449	(118147080)	+	(A)n	Simple_repeat	1	25	(0)	2092555
307	21.9	0.0	0.0	chr2	130337127	130337199	(111856330)	C	tRNA-Glu-GAG_	tRNA	(2)	73	1	2101680
574	34.4	9.7	2.2	chr2	150735358	150735759	(91457770)	C	L1MC4	LINE/L1	(5725)	490	56	2129809
295	24.4	2.2	0.0	chr2	150735910	150735999	(91457530)	+	L1ME1	LINE/L1	17	108	(6315)	2129810
659	28.6	4.5	1.7	chr2	178219184	178219418	(63974111)	C	MIRb	SINE/MIR	(2)	266	25	2168758
1281	18.8	8.4	5.7	chr2	184338718	184339110	(57854419)	+	MER67C	LTR/ERV1	2	397	(314)	2176429
12	8.3	3.6	3.5	chr2	187409033	187409060	(54784469)	+	(TCTT)n	Simple_repeat	1	29	(0)	2180366
5106	12.3	4.9	3.9	chr2	190869522	190870244	(51323285)	C	MER4D	LTR/ERV1	(0)	903	180	2185051
186	34.0	9.3	0.0	chr2	195212846	195212942	(46980587)	C	L2a	LINE/L2	(18)	3408	3302	2190608
392	12.4	12.3	1.6	chr2	197484909	197485019	(44708510)	+	AluY	SINE/Alu	1	126	(176)	2194136
1111	13.5	15.1	0.5	chr2	197502161	197502353	(44691176)	+	MER30	DNA/hAT-Charlie	5	230	(0)	2194161
204	37.3	6.6	6.6	chr2	199869892	199870043	(42323486)	+	AmnSINE2	SINE/tRNA-Deu	16	167	(191)	2197448
19	4.0	0.0	0.0	chr2	202634995	202635020	(39558509)	+	(GCG)n	Simple_repeat	1	26	(0)	2202411
15	10.6	0.0	5.9	chr2	204205865	204205898	(37987631)	+	A-rich	Low_complexity	1	34	(0)	2205283
4333	18.1	2.9	1.2	chr2	209305738	209306210	(32887319)	C	MER52A	LTR/ERV1	(0)	1755	1280	2212847
314	38.3	5.9	8.1	chr2	209309585	209310074	(32883455)	C	L2b	LINE/L2	(257)	3118	2655	2212851
5457	7.9	1.1	4.0	chr2	213687877	213688678	(28504851)	C	MER4E1	LTR/ERV1	(2)	779	1	2218548
4360	16.6	1.9	3.0	chr2	216114477	216115267	(26078262)	+	MER50C	LTR/ERV1	1	782	(0)	2222208
12	0.0	3.9	7.4	chr2	216505585	216505610	(25687919)	+	(GGGT)n	Simple_repeat	1	27	(0)	2222866
18	16.9	2.3	4.4	chr2	219229338	219229381	(22964148)	+	(CG)n	Simple_repeat	1	45	(0)	2227554
24	8.0	2.5	0.0	chr2	219229565	219229604	(22963925)	+	(GGCTC)n	Simple_repeat	1	41	(0)	2227555
193	32.2	7.0	7.6	chr2	221468276	221468433	(20725096)	+	L3	LINE/CR1	2299	2455	(1644)	2231107
196	28.8	4.8	0.0	chr2	225072530	225072588	(17120941)	C	MIR	SINE/MIR	(66)	196	135	2236979
262	33.5	8.0	4.2	chr2	225072600	225072792	(17120737)	+	L2a	LINE/L2	3112	3312	(75)	2236980
34360	7.0	0.4	0.9	chr2	231401207	231405702	(10787827)	+	HERVE-int	LTR/ERV1	1	4470	(3343)	2246797
1185	21.7	3.5	1.8	chr2	231410660	231410941	(10782588)	C	MamGypLTR3a	LTR/Gypsy	(648)	333	47	2246804
890	17.4	22.9	0.5	chr2	231453216	231453422	(10740107)	C	AluJr	SINE/Alu	(45)	267	1	2246901
25	33.7	0.0	0.0	chr2	231711884	231711977	(10481552)	+	GA-rich	Low_complexity	1	94	(0)	2247482
13	19.3	9.4	0.0	chr2	238239917	238239969	(3953560)	+	G-rich	Low_complexity	1	58	(0)	2257547
1184	14.9	4.6	4.2	chr20	3929193	3929407	(60514760)	+	AluJo	SINE/Alu	81	296	(16)	2269799
613	23.0	12.5	0.0	chr20	17939554	17939714	(46504453)	C	AluJo	SINE/Alu	(44)	268	85	2291792
24	25.2	2.7	1.3	chr20	31514352	31514424	(32929743)	+	(GC)n	Simple_repeat	1	75	(0)	2306155
492	27.8	2.8	12.2	chr20	31535688	31535925	(32908242)	C	L2a	LINE/L2	(0)	3426	3173	2306212
1632	16.1	14.1	2.4	chr20	31572153	31572317	(32871850)	C	Tigger2a	DNA/TcMar-Tigger	(257)	177	2	2306290
257	21.6	11.7	0.0	chr20	31572327	31572418	(32871749)	C	MIR	SINE/MIR	(73)	195	96	2306293
14	13.4	6.1	0.0	chr20	31573028	31573060	(32871107)	+	GA-rich	Low_complexity	1	35	(0)	2306294
605	17.4	10.8	0.0	chr20	31584363	31584477	(32859690)	C	FLAM_A	SINE/Alu	(10)	132	4	2306329
1273	18.8	0.0	3.6	chr20	31584591	31584726	(32859441)	+	AluJb	SINE/Alu	1	131	(181)	2306330
2157	21.3	8.1	6.2	chr20	31585586	31585972	(32858195)	+	MER4B	LTR/ERV1	4	381	(229)	2306334
183	33.0	5.7	2.0	chr20	31595452	31595553	(32848614)	C	MIR	SINE/MIR	(46)	216	111	2306361
250	12.5	0.0	0.0	chr20	31595611	31595650	(32848517)	+	MIR	SINE/MIR	80	119	(143)	2306362
197	21.6	0.0	0.0	chr20	31606766	31606802	(32837365)	C	MER5A	DNA/hAT-Charlie	(24)	165	129	2306392
195	30.2	5.5	2.3	chr20	31606870	31606957	(32837210)	C	MIR3	SINE/MIR	(50)	158	68	2306393
381	28.2	0.9	1.8	chr20	31608989	31609100	(32835067)	C	MIR	SINE/MIR	(16)	246	136	2306397
261	27.2	16.7	0.6	chr20	31662621	31662801	(32781366)	+	L2	LINE/L2	2548	2763	(656)	2306562
1332	14.1	7.9	1.7	chr20	31662806	31663043	(32781124)	+	MER39	LTR/ERV1	4	257	(450)	2306563
1234	24.0	5.4	0.7	chr20	31833170	31833502	(32610665)	C	L2a	LINE/L2	(245)	3181	2833	2306976
417	27.8	15.9	1.7	chr20	32812374	32812545	(31631622)	+	MIR	SINE/MIR	50	250	(12)	2309321
292	28.5	11.2	4.8	chr20	32812598	32812763	(31631404)	C	MIRb	SINE/MIR	(90)	178	1	2309322
26	0.0	0.0	0.0	chr20	35277856	35277880	(29166287)	+	(GGCTGG)n	Simple_repeat	1	25	(0)	2314927
16	14.4	2.5	2.4	chr20	35742239	35742278	(28701889)	+	(ACACAC)n	Simple_repeat	1	41	(0)	2315915
6288	12.0	14.2	0.9	chr20	36676803	36677908	(27766259)	+	MER52C	LTR/ERV1	1	1278	(0)	2318177
31	38.3	0.6	2.9	chr20	40274953	40275124	(24169043)	+	(TG)n	Simple_repeat	1	173	(0)	2325481
13	32.3	1.6	0.0	chr20	45935022	45935085	(18509082)	+	(CCTCCG)n	Simple_repeat	1	65	(0)	2336592
11	21.8	5.4	6.4	chr20	48921544	48921617	(15522550)	+	(CCCTTCG)n	Simple_repeat	1	78	(0)	2343219
2216	12.5	0.0	0.0	chr20	49279343	49279646	(15164521)	+	AluSx	SINE/Alu	1	304	(8)	2344008
2602	21.8	1.1	0.2	chr20	49284129	49284587	(15159580)	C	HERVIP10B3-int	LTR/ERV1	(4621)	3116	2654	2344011
1922	19.0	19.2	0.5	chr20	49287071	49287514	(15156653)	C	LTR10B1	LTR/ERV1	(0)	547	1	2344011
951	20.1	8.6	1.6	chr20	49288411	49288604	(15155563)	C	AluJo	SINE/Alu	(19)	293	85	2344013
616	29.3	1.8	6.0	chr20	53768325	53768588	(10675579)	+	MIRb	SINE/MIR	6	268	(0)	2354297
540	24.3	7.7	1.4	chr20	57232113	57232258	(7211909)	+	MIR	SINE/MIR	31	186	(76)	2360811
797	22.4	0.5	0.1	chr21	8228115	8229742	(38480241)	+	(TCTC)n	Simple_repeat	1	1633	(0)	2373325
1215	20.9	17.3	0.0	chr21	20661571	20661957	(26048026)	C	MER110A	LTR/ERV1	(0)	468	1	2385964
2523	8.4	2.2	1.0	chr21	26081260	26081656	(20628327)	C	LTR7	LTR/ERV1	(48)	402	1	2393479
24	15.8	1.7	3.3	chr21	28885363	28885422	(17824561)	+	(CATGCG)n	Simple_repeat	1	61	(0)	2397390
89	17.2	1.6	2.6	chr21	36111727	36111918	(10598065)	+	GA-rich	Low_complexity	1	195	(0)	2409149
2339	10.3	0.0	0.3	chr21	36112041	36112341	(10597642)	+	AluSq2	SINE/Alu	1	300	(13)	2409150
2280	11.3	0.0	2.5	chr21	36306647	36306964	(10403019)	+	AluSx1	SINE/Alu	1	310	(2)	2409581
5148	8.0	3.5	6.6	chr21	36306965	36307383	(10402600)	C	MER4E1	LTR/ERV1	(347)	434	18	2409579
2808	13.9	4.6	2.3	chr21	42937076	42937545	(3772438)	+	LTR2B	LTR/ERV1	1	481	(2)	2419593
265	20.8	0.0	0.0	chr21	42937548	42937595	(3772388)	C	FRAM	SINE/Alu	(69)	97	50	2419591
3511	7.7	0.6	1.7	chr21	42937596	42938069	(3771914)	+	MER4A1	LTR/ERV1	1	469	(3)	2419596
45	21.2	4.0	6.7	chr21	44706298	44706498	(2003485)	+	(CACG)n	Simple_repeat	1	209	(0)	2422050
1313	8.7	0.0	1.5	chr22	18948886	18949065	(31869403)	C	MER9a3	LTR/ERVK	(0)	512	335	2431227
2336	7.8	3.0	0.0	chr22	18949066	18949359	(31869109)	C	AluY	SINE/Alu	(7)	304	2	2431228
2437	11.9	19.3	13.8	chr22	19316621	19316963	(31501505)	+	LTR76	LTR/ERV1	232	675	(0)	2431792
2647	15.0	3.7	8.0	chr22	19316967	19317023	(31501445)	C	L1MC2	LINE/L1	(370)	5974	5924	2431794
242	25.1	9.8	1.5	chr22	29553838	29553941	(21264527)	+	L2a	LINE/L2	3260	3423	(3)	2450826
2078	7.2	3.6	0.0	chr22	36481703	36481993	(14336475)	C	AluSc	SINE/Alu	(0)	309	5	2465157
315	29.2	12.4	2.9	chr22	38287244	38287397	(12531071)	C	MIRb	SINE/MIR	(85)	183	5	2469186
2105	2.3	1.1	0.0	chr22	38396539	38396797	(12421671)	C	LTR7Y	LTR/ERV1	(0)	472	211	2469392
183	31.7	4.7	1.2	chr22	39310843	39310925	(11507543)	+	MIR3	SINE/MIR	11	96	(112)	2471355
636	19.9	10.9	1.2	chr22	39954190	39954362	(10864106)	C	MLT1L	LTR/ERVL-MaLR	(2)	608	417	2472585
15	19.6	0.0	0.0	chr22	41091811	41091839	(9726629)	+	GA-rich	Low_complexity	1	29	(0)	2475138
1129	24.2	9.8	1.7	chr22	42965064	42965420	(7853048)	+	L1ME1	LINE/L1	5777	6165	(14)	2479271
476	31.7	15.8	6.1	chr3	4432177	4432880	(193862679)	+	L2a	LINE/L2	2490	3421	(5)	2498988
29	17.9	3.8	2.4	chr3	4493401	4493479	(193802080)	+	GA-rich	Low_complexity	1	82	(0)	2499109
237	24.4	27.2	1.9	chr3	23921216	23921428	(174374131)	+	L2	LINE/L2	2744	3030	(389)	2531004
2221	12.5	0.7	0.0	chr3	23921571	23921874	(174373685)	C	AluSz	SINE/Alu	(6)	306	1	2531005
5967	5.6	1.8	0.4	chr3	30085356	30086125	(168209434)	+	MER4E1	LTR/ERV1	1	781	(0)	2540038
263	30.9	0.0	1.1	chr3	30549777	30549871	(167745688)	C	CR1-13_AMi	LINE/CR1	(20)	704	611	2540699
14	15.9	0.0	0.0	chr3	33426304	33426331	(164869228)	+	(CAG)n	Simple_repeat	1	28	(0)	2545839
683	23.9	8.2	1.7	chr3	48963501	48963907	(149331652)	C	L1M5	LINE/L1	(416)	5757	5304	2570391
287	34.7	2.9	4.3	chr3	50818186	50818393	(147477166)	C	HAL1	LINE/L1	(2108)	399	195	2573611
2208	11.3	0.0	0.7	chr3	53252842	53253141	(145042418)	C	AluSq2	SINE/Alu	(15)	298	1	2577290
18	12.1	0.0	0.0	chr3	54631530	54631557	(143664002)	+	(AC)n	Simple_repeat	1	28	(0)	2579325
916	22.9	7.1	2.8	chr3	54633721	54633802	(143661757)	+	MIR	SINE/MIR	156	246	(16)	2579328
865	22.9	11.6	2.3	chr3	54634218	54634481	(143661078)	+	L2a	LINE/L2	3008	3299	(127)	2579331
3454	6.2	0.0	0.7	chr3	60672203	60672653	(137622906)	C	LTR7	LTR/ERV1	(2)	448	1	2589341
5102	20.7	7.9	3.6	chr3	63308392	63309852	(134985707)	C	L1MEc	LINE/L1	(4534)	1866	338	2593817
331	26.3	7.9	8.4	chr3	66572909	66573074	(131722485)	+	MamGypLTR3a	LTR/Gypsy	114	278	(703)	2599450
381	16.8	23.8	2.0	chr3	73073193	73073336	(125222223)	+	MIR	SINE/MIR	16	197	(71)	2610548
3312	11.0	2.2	2.8	chr3	87727755	87728404	(110567155)	+	MER4B	LTR/ERV1	1	900	(0)	2629896
472	22.1	11.5	3.0	chr3	98242193	98242358	(100053201)	+	MSTB1	LTR/ERVL-MaLR	3	175	(257)	2638750
1811	26.2	6.7	5.9	chr3	98242367	98243628	(100051931)	C	MER34B-int	LTR/ERV1	(2080)	3276	1764	2638749
602	21.7	6.5	7.3	chr3	109323806	109323938	(88971621)	C	L1ME2	LINE/L1	(87)	6077	5948	2653667
512	20.9	12.4	0.0	chr3	109323955	109324088	(88971471)	C	MER5A	DNA/hAT-Charlie	(36)	153	1	2653669
2088	12.7	0.7	0.0	chr3	109324107	109324398	(88971161)	C	AluSq2	SINE/Alu	(19)	294	1	2653670
1088	15.3	0.0	0.0	chr3	109324412	109324561	(88970998)	C	AluSx	SINE/Alu	(29)	283	134	2653671
2361	9.1	1.0	0.0	chr3	109324562	109324859	(88970700)	C	AluSp	SINE/Alu	(12)	301	1	2653672
1773	4.9	5.6	0.9	chr3	109324893	109325115	(88970444)	C	AluY	SINE/Alu	(77)	234	1	2653673
1812	14.5	2.3	1.0	chr3	109325117	109325413	(88970146)	C	AluJb	SINE/Alu	(11)	301	1	2653674
237	31.6	7.2	5.0	chr3	109326084	109326366	(88969193)	+	L1MEj	LINE/L1	1724	2013	(147)	2653676
2011	13.5	1.7	0.3	chr3	109327390	109327685	(88967874)	+	AluSx1	SINE/Alu	1	300	(12)	2653678
2354	8.8	0.3	0.0	chr3	109332105	109332400	(88963159)	C	AluSx3	SINE/Alu	(14)	297	1	2653689
981	29.9	2.6	6.4	chr3	112413958	112414442	(85881117)	C	L1M3b	LINE/L1	(5807)	1230	765	2657797
2359	9.8	0.0	0.0	chr3	112415197	112415491	(85880068)	+	AluSc	SINE/Alu	1	295	(14)	2657799
337	40.2	1.6	2.6	chr3	112415521	112415709	(85879850)	+	L2a	LINE/L2	2922	3108	(318)	2657800
3985	11.7	2.1	0.6	chr3	112415712	112416357	(85879202)	C	L1MA2	LINE/L1	(0)	6304	5649	2657801
1235	15.2	7.3	0.8	chr3	112416879	112417123	(85878436)	C	MER21A	LTR/ERVL	(667)	264	3	2657802
4064	14.8	5.6	2.7	chr3	112417512	112418253	(85877306)	+	LTR60B	LTR/ERV1	1	765	(0)	2657803
19	35.7	0.0	2.0	chr3	129316101	129316199	(68979360)	+	(CCGGAG)n	Simple_repeat	1	99	(0)	2683539
408	28.4	3.5	12.1	chr3	133949645	133949817	(64345742)	C	MIRb	SINE/MIR	(10)	258	93	2690717
425	29.4	3.0	4.7	chr3	155243739	155243909	(43051650)	C	MIR3	SINE/MIR	(21)	187	20	2722225
29	6.1	0.0	0.0	chr3	155243958	155243991	(43051568)	+	(AC)n	Simple_repeat	1	34	(0)	2722226
30	10.3	0.0	0.0	chr3	155245004	155245046	(43050513)	+	(TC)n	Simple_repeat	1	43	(0)	2722229
50	4.0	0.0	0.0	chr3	155245047	155245098	(43050461)	+	(CA)n	Simple_repeat	1	52	(0)	2722230
2372	20.6	4.9	0.8	chr3	155262018	155262566	(43032993)	C	MLT2B3	LTR/ERVL	(33)	684	117	2722245
990	16.6	5.4	0.0	chr3	155262567	155262741	(43032818)	C	MER5A	DNA/hAT-Charlie	(0)	189	5	2722247
1903	15.7	11.2	0.3	chr3	168532462	168532819	(29762740)	+	MER57E2	LTR/ERV1	1	402	(0)	2740201
684	0.0	0.0	0.0	chr3	169772230	169772303	(28523256)	+	tRNA-Val-GTY	tRNA	1	74	(2)	2741787
19	0.0	0.0	0.0	chr3	169772317	169772337	(28523222)	+	(T)n	Simple_repeat	1	21	(0)	2741788
18	6.8	0.0	5.7	chr3	169772369	169772403	(28523156)	+	(TTTGT)n	Simple_repeat	1	35	(0)	2741789
391	25.9	14.6	4.2	chr3	172301003	172301218	(25994341)	+	MIRb	SINE/MIR	2	250	(18)	2745889
1716	18.8	11.2	10.0	chr3	174232453	174233013	(24062546)	C	LTR49	LTR/ERV1	(26)	569	1	2748676
3397	6.2	0.0	0.7	chr3	176321619	176322069	(21973490)	C	LTR7	LTR/ERV1	(2)	448	1	2751527
184	25.7	22.3	1.0	chr3	181860304	181860405	(16435154)	+	MIR	SINE/MIR	52	181	(81)	2760084
799	21.0	1.4	0.7	chr3	185912931	185913073	(12382486)	+	AluJr	SINE/Alu	157	300	(12)	2767380
203	35.7	8.1	0.6	chr3	187185842	187186024	(11109535)	C	L2a	LINE/L2	(316)	3110	2913	2769709
14	17.0	0.0	2.9	chr3	187618993	187619027	(10676532)	+	(CCTC)n	Simple_repeat	1	35	(0)	2770422
12	17.4	0.0	8.7	chr3	190041748	190041793	(8253766)	+	(TTTTTAA)n	Simple_repeat	1	46	(0)	2774486
2621	14.0	10.3	0.2	chr3	191688745	191689217	(6606342)	C	LTR22B1	LTR/ERVK	(0)	526	1	2776883
13	13.1	5.6	9.3	chr3	195270948	195271018	(3024541)	+	(GGCCAGC)n	Simple_repeat	1	75	(0)	2782627
374	31.5	10.0	7.5	chr3	195806188	195806616	(2488943)	+	L2a	LINE/L2	2986	3426	(0)	2783658
2460	6.6	0.0	0.3	chr4	498722	499023	(189715532)	C	AluSc	SINE/Alu	(8)	301	1	2789188
13	28.0	0.0	0.0	chr4	1793348	1793390	(188421165)	+	(CGGA)n	Simple_repeat	1	43	(0)	2790608
16	15.2	4.2	4.0	chr4	1793384	1793431	(188421124)	+	G-rich	Low_complexity	1	50	(0)	2790609
318	26.5	2.8	4.3	chr4	8269369	8269460	(181945095)	C	MIR	SINE/MIR	(60)	208	108	2801511
2213	16.2	5.2	4.1	chr4	19429640	19430129	(170784426)	+	LTR22C2	LTR/ERVK	1	496	(0)	2819471
3244	13.7	7.1	0.7	chr4	21543590	21544183	(168670372)	+	LTR24C	LTR/ERV1	1	635	(0)	2822667
241	30.2	6.0	1.6	chr4	22943160	22943287	(167271268)	C	Tigger12c	DNA/TcMar-Tigger	(71)	663	530	2824807
604	19.0	1.7	0.0	chr4	22943285	22943400	(167271155)	C	Tigger12c	DNA/TcMar-Tigger	(446)	288	171	2824807
26	6.3	0.0	0.0	chr4	40055708	40055741	(150158814)	+	(ACC)n	Simple_repeat	1	34	(0)	2851168
1613	25.6	7.4	6.5	chr4	44863745	44864216	(145350339)	C	MLT1F	LTR/ERVL-MaLR	(4)	544	56	2858852
335	33.9	10.0	1.2	chr4	57545356	57545600	(132668955)	C	L2b	LINE/L2	(2520)	899	631	2874638
3162	6.7	0.2	10.6	chr4	64737777	64738276	(125476279)	+	LTR7	LTR/ERV1	1	448	(2)	2883521
641	28.9	8.0	2.0	chr4	68451659	68451905	(121762650)	C	MIRb	SINE/MIR	(0)	268	6	2888383
27	7.0	4.4	0.0	chr4	73258871	73258915	(116955640)	+	(GGGA)n	Simple_repeat	1	47	(0)	2894659
762	19.9	0.0	11.2	chr4	78721976	78722162	(111492393)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	2902622
1598	16.5	5.9	0.4	chr4	82422130	82422401	(107792154)	C	AluJb	SINE/Alu	(24)	288	1	2907600
339	34.8	4.4	2.6	chr4	83781574	83781737	(106432818)	C	MER5A	DNA/hAT-Charlie	(1)	188	12	2910195
226	31.7	9.0	0.0	chr4	83922481	83922622	(106291933)	C	Eulor2B	DNA?	(0)	273	118	2910436
13709	17.7	2.6	2.0	chr4	84334396	84339389	(105875166)	C	L1PA13	LINE/L1	(1338)	5428	496	2910968
13	17.6	2.5	2.4	chr4	87006836	87006876	(103207679)	+	(CTGCCGC)n	Simple_repeat	1	41	(0)	2914790
2654	18.3	3.5	3.5	chr4	87931419	87932165	(102282390)	+	L1M3	LINE/L1	4840	5574	(600)	2916252
6946	16.4	2.0	1.0	chr4	87932168	87932761	(102281794)	C	L1M3	LINE/L1	(1316)	4824	4216	2916253
4438	12.8	0.0	0.2	chr4	87932762	87933395	(102281160)	+	MER41B	LTR/ERV1	2	634	(0)	2916254
6946	16.4	2.0	1.0	chr4	87933396	87934246	(102280309)	C	L1M3	LINE/L1	(1925)	4215	3366	2916253
1630	9.3	2.2	0.4	chr4	87934333	87934558	(102279997)	C	MER30	DNA/hAT-Charlie	(0)	230	1	2916255
305	25.3	3.7	0.0	chr4	87935631	87935709	(102278846)	+	L2a	LINE/L2	3311	3392	(34)	2916256
300	9.8	0.0	0.0	chr4	87935720	87935760	(102278795)	+	MER50	LTR/ERV1	694	734	(0)	2916257
238	15.4	0.0	0.0	chr4	87935761	87935799	(102278756)	+	L2a	LINE/L2	3388	3426	(0)	2916256
3601	4.0	0.5	0.2	chr4	87935922	87936368	(102278187)	C	LTR7	LTR/ERV1	(2)	448	1	2916258
3396	6.3	0.2	0.7	chr4	91623640	91624089	(98590466)	+	LTR7	LTR/ERV1	1	448	(2)	2921367
7906	18.8	2.8	0.6	chr4	91630929	91631506	(98583049)	+	L1M2	LINE/L1	3162	3748	(3097)	2921366
5174	21.5	4.4	2.9	chr4	92254187	92255466	(97959089)	C	L1P3b	LINE/L1	(5141)	1320	8	2922046
3302	27.6	5.5	5.6	chr4	92255532	92257526	(97957029)	C	L1M2	LINE/L1	(4787)	2062	10	2922047
5587	5.2	0.0	0.0	chr4	92259175	92259862	(97954693)	C	L1PA6	LINE/L1	(4)	6150	5463	2922051
3376	7.2	0.0	0.7	chr4	92277198	92277648	(97936907)	C	LTR7	LTR/ERV1	(2)	448	1	2922065
3246	6.5	0.4	1.1	chr4	92444204	92444654	(97769901)	C	LTR7	LTR/ERV1	(2)	448	1	2922279
25	26.9	1.7	5.0	chr4	99946616	99946732	(90267823)	+	(GGCGGC)n	Simple_repeat	1	119	(0)	2932376
1330	26.1	14.1	1.4	chr4	106316918	106317609	(83896946)	C	L2a	LINE/L2	(0)	3426	2636	2940650
1041	21.9	3.0	6.8	chr4	112645505	112645815	(77568740)	C	AluJb	SINE/Alu	(11)	301	3	2949528
1841	10.3	9.7	0.0	chr4	112645996	112646266	(77568289)	C	AluSx3	SINE/Alu	(8)	303	4	2949529
20	11.6	0.0	0.0	chr4	112648925	112648953	(77565602)	+	(A)n	Simple_repeat	1	29	(0)	2949534
1806	15.6	0.0	3.6	chr4	112759144	112759444	(77455111)	C	AluJr	SINE/Alu	(22)	290	1	2949812
518	21.7	2.5	3.4	chr4	120003315	120003433	(70211122)	+	MLT1H2	LTR/ERVL-MaLR	48	165	(324)	2959245
6661	18.8	5.8	1.5	chr4	120003749	120005302	(70209253)	+	L1M3f	LINE/L1	1239	2861	(4704)	2959247
449	16.7	11.8	0.0	chr4	122828205	122828294	(67386261)	C	MER5A	DNA/hAT-Charlie	(87)	102	1	2963091
948	29.1	9.3	7.5	chr4	134623998	134624637	(55589918)	+	UCON1	Unknown	133	785	(601)	2978345
2055	17.6	1.6	1.3	chr4	138647768	138648153	(51566402)	C	MLT1B	LTR/ERVL-MaLR	(3)	387	1	2983157
4849	11.3	4.1	0.1	chr4	139158842	139159609	(51054946)	C	HERVH-int	LTR/ERV1	(2693)	5020	4221	2984057
399	14.7	0.0	1.4	chr4	139159610	139159678	(51054877)	C	HERVH-int	LTR/ERV1	(3425)	4288	4221	2984057
1792	17.4	0.8	1.3	chr4	139159679	139160055	(51054500)	C	HERVH-int	LTR/ERV1	(2053)	4601	3962	2984057
295	26.9	12.3	3.9	chr4	151099121	151099275	(39115280)	C	MIRb	SINE/MIR	(72)	196	27	3000859
13	30.0	6.0	1.1	chr4	153760256	153760320	(36454235)	+	GA-rich	Low_complexity	1	89	(0)	3005153
15	0.0	5.3	0.0	chr4	153760321	153760339	(36454216)	+	(AG)n	Simple_repeat	1	20	(0)	3005154
6027	12.6	1.6	1.1	chr4	159976488	159977451	(30237104)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	3013577
2385	9.7	0.0	0.6	chr4	166722599	166722909	(23491646)	+	AluY	SINE/Alu	2	310	(1)	3022703
1420	20.7	9.2	1.2	chr4	166726951	166727345	(23487210)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3022709
31	3.3	0.0	0.0	chr4	166738225	166738255	(23476300)	+	(TG)n	Simple_repeat	1	31	(0)	3022725
6546	2.9	0.0	0.0	chr4	166738469	166739232	(23475323)	C	L1PA3	LINE/L1	(0)	6155	5392	3022727
3349	16.4	4.1	4.5	chr4	179124056	179124618	(11089937)	C	MER41B	LTR/ERV1	(62)	572	1	3039093
559	28.5	16.6	3.5	chr4	179124619	179124645	(11089910)	C	MLT1E3	LTR/ERVL-MaLR	(593)	34	10	3039092
5243	8.0	1.8	3.2	chr4	179165662	179166438	(11048117)	+	MER4E	LTR/ERV1	1	766	(0)	3039153
3054	8.3	2.9	0.7	chr4	181949982	181950417	(8264138)	+	LTR7	LTR/ERV1	3	448	(2)	3042759
509	29.6	0.8	4.0	chr4	183183350	183183500	(7031055)	C	L1ME4c	LINE/L1	(465)	365	219	3044543
1633	17.9	2.9	3.3	chr4	183183501	183183807	(7030748)	+	AluJb	SINE/Alu	2	307	(5)	3044544
1439	9.5	3.9	9.1	chr4	188399564	188399806	(1814749)	+	MER30	DNA/hAT-Charlie	1	230	(0)	3052547
2513	15.6	14.4	3.1	chr4	188399807	188400356	(1814199)	C	MER4CL34	LTR/ERV1	(130)	635	1	3052546
371	25.3	10.8	3.5	chr5	5134153	5134324	(176403935)	+	MLT1H	LTR/ERVL-MaLR	364	549	(0)	3060208
2428	11.9	10.9	3.0	chr5	10102224	10102655	(171435604)	+	LTR7Y	LTR/ERV1	1	470	(2)	3066321
5089	9.8	5.0	0.0	chr5	12332253	12332994	(169205265)	C	MER4E1	LTR/ERV1	(0)	781	1	3069454
3033	10.8	1.3	0.0	chr5	12657916	12658376	(168879883)	C	L1PREC2	LINE/L1	(0)	6160	5694	3069837
6180	5.8	0.5	0.3	chr5	12660382	12661159	(168877100)	C	LTR17	LTR/ERV1	(0)	780	1	3069839
2667	20.2	7.0	3.4	chr5	18736022	18736632	(162801627)	+	MER67C	LTR/ERV1	58	661	(50)	3078444
620	29.9	1.0	3.7	chr5	25406089	25406311	(156131948)	+	LTR16C	LTR/ERVL	180	443	(95)	3087291
496	23.7	12.7	5.5	chr5	25406745	25407063	(156131196)	+	MLT1G1	LTR/ERVL-MaLR	1	374	(205)	3087292
40	0.0	0.0	0.0	chr5	25411377	25411410	(156126849)	+	(CA)n	Simple_repeat	1	34	(0)	3087298
38	22.7	0.0	2.2	chr5	25411411	25411436	(156126823)	+	(TC)n	Simple_repeat	2	27	(0)	3087299
235	32.5	13.1	0.0	chr5	25411556	25411681	(156126578)	+	L2c	LINE/L2	3022	3166	(221)	3087300
18	23.8	2.0	1.9	chr5	25412247	25412297	(156125962)	+	(AC)n	Simple_repeat	1	52	(0)	3087301
217	36.0	2.9	0.0	chr5	25414842	25414941	(156123318)	C	MIRc	SINE/MIR	(157)	111	9	3087305
1741	17.0	13.6	0.5	chr5	25418301	25418672	(156119587)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3087311
1136	22.4	11.8	4.0	chr5	25418691	25419012	(156119247)	+	MLT1A0	LTR/ERVL-MaLR	1	408	(0)	3087312
240	19.0	4.9	4.9	chr5	25419996	25420056	(156118203)	+	MLT1I	LTR/ERVL-MaLR	351	411	(0)	3087313
6263	15.5	3.3	3.4	chr5	25420457	25421495	(156116764)	+	Tigger3b	DNA/TcMar-Tigger	3	1056	(175)	3087314
2307	6.4	1.8	1.4	chr5	25421496	25421800	(156116459)	C	AluY	SINE/Alu	(0)	311	1	3087315
6263	15.5	3.3	3.4	chr5	25421801	25421989	(156116270)	+	Tigger3b	DNA/TcMar-Tigger	1057	1230	(1)	3087314
2296	8.3	1.1	3.8	chr5	25422476	25422840	(156115419)	C	L1PA8	LINE/L1	(0)	6172	5818	3087317
659	24.3	2.9	2.3	chr5	25425600	25425772	(156112487)	+	MER58A	DNA/hAT-Charlie	48	221	(3)	3087319
34	0.0	0.0	0.0	chr5	25430070	25430098	(156108161)	+	(AC)n	Simple_repeat	1	29	(0)	3087323
1777	19.1	0.9	4.2	chr5	25431293	25431647	(156106612)	C	MER2	DNA/TcMar-Tigger	(0)	345	3	3087324
2411	9.5	0.0	0.0	chr5	25431789	25432083	(156106176)	C	AluSx1	SINE/Alu	(12)	300	6	3087325
568	23.2	2.4	5.9	chr5	25432565	25432784	(156105475)	C	L1MEd	LINE/L1	(2130)	4016	3805	3087326
5940	17.6	3.6	3.6	chr5	25434633	25436820	(156101439)	+	L1MC1	LINE/L1	4127	6316	(17)	3087329
12	21.6	0.0	0.0	chr5	25437887	25437918	(156100341)	+	(TCTCTA)n	Simple_repeat	1	32	(0)	3087330
2805	5.3	10.9	0.0	chr5	25445823	25446221	(156092038)	C	LTR7	LTR/ERV1	(2)	448	1	3087341
369	28.4	5.5	0.0	chr5	27479829	27479930	(154058329)	+	L2a	LINE/L2	3303	3410	(16)	3089962
2300	11.0	0.7	0.7	chr5	27480917	27481226	(154057033)	C	AluSg4	SINE/Alu	(0)	310	1	3089963
384	24.9	10.9	3.6	chr5	27481780	27482000	(154056259)	C	Charlie4	DNA/hAT-Charlie	(20)	1941	1703	3089966
828	31.7	5.4	3.8	chr5	27491286	27492043	(154046216)	C	ERV3-16A3_I-int	LTR/ERVL	(3040)	2674	1995	3089981
495	31.1	5.5	6.9	chr5	27493031	27493306	(154044953)	+	LTR33	LTR/ERVL	3	274	(241)	3089983
2224	11.9	5.2	2.0	chr5	34834550	34834900	(146703359)	C	THE1B	LTR/ERVL-MaLR	(1)	363	1	3100480
5390	14.8	1.9	0.5	chr5	35337451	35338340	(146199919)	C	MER4D	LTR/ERV1	(0)	903	1	3101266
1472	16.4	3.3	9.7	chr5	35754412	35754783	(145783476)	C	MER67C	LTR/ERV1	(308)	403	27	3101841
1213	33.7	4.8	9.5	chr5	58717132	58717818	(122820441)	C	LTR78B	LTR/ERV1	(170)	1126	459	3128493
303	22.0	1.7	0.0	chr5	58717944	58718002	(122820257)	C	LTR78B	LTR/ERV1	(1234)	62	3	3128495
3561	5.8	0.2	0.5	chr5	80185505	80185953	(101352306)	C	LTR7	LTR/ERV1	(2)	448	1	3161016
19	3.8	0.0	0.0	chr5	80246279	80246306	(101291953)	+	(AAAAC)n	Simple_repeat	1	28	(0)	3161159
437	33.1	4.1	2.1	chr5	84480910	84481100	(97057159)	+	MIRb	SINE/MIR	56	250	(18)	3167317
3698	25.1	7.2	1.5	chr5	108672657	108673962	(72864297)	+	ERV3-16A3_I-int	LTR/ERVL	170	1555	(3671)	3197957
15	19.7	0.0	0.0	chr5	116444233	116444261	(65093998)	+	A-rich	Low_complexity	1	29	(0)	3208152
220	36.2	9.1	8.2	chr5	116459496	116459930	(65078329)	+	L2b	LINE/L2	2937	3379	(8)	3208166
255	31.2	6.5	2.5	chr5	116481091	116481251	(65057008)	+	MamSINE1	SINE/tRNA-RTE	119	286	(4)	3208185
708	24.1	0.0	0.0	chr5	116546471	116546628	(64991631)	C	MER5A1	DNA/hAT-Charlie	(0)	166	9	3208258
488	29.3	9.1	1.1	chr5	116567473	116567655	(64970604)	C	MIR	SINE/MIR	(0)	262	64	3208275
3271	5.1	0.0	8.6	chr5	120697546	120698035	(60840224)	C	LTR7	LTR/ERV1	(2)	448	1	3213829
19	6.6	3.1	0.0	chr5	124751264	124751295	(56786964)	+	(TTTTG)n	Simple_repeat	1	33	(0)	3219051
3251	6.8	2.2	0.9	chr5	126839337	126839778	(54698481)	C	LTR7	LTR/ERV1	(2)	448	1	3222082
2641	22.8	6.1	7.2	chr5	127079369	127080142	(54458117)	C	Tigger13a	DNA/TcMar-Tigger	(2)	769	5	3222387
14	18.8	6.0	1.9	chr5	134845910	134845959	(46692300)	+	(CGCGTG)n	Simple_repeat	1	53	(0)	3233498
206	20.8	0.0	0.0	chr5	135400096	135400143	(46138116)	+	MIRb	SINE/MIR	145	192	(76)	3234232
1272	14.8	0.5	0.0	chr5	135403438	135403626	(46134633)	+	AluSz	SINE/Alu	1	190	(122)	3234239
1664	13.8	0.7	0.0	chr5	136381873	136382155	(45156104)	C	MER47A	DNA/TcMar-Tigger	(74)	292	8	3235595
1048	11.7	2.8	10.1	chr5	136382160	136382387	(45155872)	C	MER67D	LTR/ERV1	(303)	211	1	3235596
3370	7.6	0.0	0.7	chr5	136565340	136565790	(44972469)	C	LTR7	LTR/ERV1	(2)	448	1	3235831
14	14.9	0.0	3.1	chr5	138338358	138338389	(43199870)	+	(CCCT)n	Simple_repeat	1	32	(0)	3238687
576	28.6	5.3	2.5	chr5	138438584	138438784	(43099475)	+	MIRb	SINE/MIR	38	244	(24)	3238878
15	0.0	5.3	0.0	chr5	139294474	139294492	(42243767)	+	(CG)n	Simple_repeat	1	20	(0)	3240506
224	32.4	27.6	0.5	chr5	139523998	139524183	(42014076)	+	MIRb	SINE/MIR	24	262	(0)	3240944
683	28.8	8.6	1.9	chr5	141674800	141675238	(39863021)	+	L2a	LINE/L2	2682	3167	(259)	3244380
17	24.2	0.0	0.0	chr5	147852813	147852878	(33685381)	+	(TCC)n	Simple_repeat	1	66	(0)	3254955
231	31.9	0.0	6.9	chr5	147853740	147853840	(33684419)	+	L2b	LINE/L2	3013	3106	(269)	3254958
3154	20.7	3.4	6.9	chr5	147855670	147856425	(33681834)	+	MER44C	DNA/TcMar-Tigger	1	729	(4)	3254960
2061	15.8	7.6	2.0	chr5	147860286	147860692	(33677567)	+	LTR7	LTR/ERV1	1	432	(0)	3254967
3394	6.3	0.5	0.7	chr5	147874078	147874526	(33663733)	C	LTR7	LTR/ERV1	(2)	448	1	3254972
2261	7.7	1.0	1.3	chr5	149488980	149489277	(32048982)	C	AluSp	SINE/Alu	(16)	297	1	3257867
216	21.4	6.7	0.0	chr5	149489383	149489438	(32048821)	+	L2a	LINE/L2	3344	3403	(23)	3257868
360	27.1	17.0	12.7	chr5	153350442	153350788	(28187471)	C	L2a	LINE/L2	(3)	3423	3059	3265075
2162	18.0	7.1	5.8	chr5	166074258	166074759	(15463500)	C	MER67D	LTR/ERV1	(5)	509	1	3286216
412	28.0	0.7	4.7	chr5	166088589	166088738	(15449521)	C	LTR104_Mam	LTR/Gypsy	(1317)	192	49	3286248
14	24.9	1.3	6.6	chr5	172284016	172284090	(9254169)	+	(CCCCGGC)n	Simple_repeat	1	76	(0)	3297093
631	29.5	10.2	1.9	chr5	173314015	173314228	(8224031)	+	MIRb	SINE/MIR	11	244	(24)	3299404
897	23.1	2.7	2.3	chr5	173316137	173316357	(8221902)	+	MER58A	DNA/hAT-Charlie	1	222	(2)	3299405
923	23.1	9.7	1.0	chr5	178126530	178127102	(3411157)	+	MER34C2	LTR/ERV1	1	558	(13)	3308605
2606	1.0	0.0	1.0	chr5	179612239	179612542	(1925717)	+	AluYa5	SINE/Alu	1	301	(10)	3311197
286	11.6	0.0	0.0	chr5	179612705	179612747	(1925512)	+	LTR6A	LTR/ERV1	1	43	(521)	3311198
3308	11.0	4.1	0.7	chr5	179612749	179613289	(1924970)	+	LTR6A	LTR/ERV1	5	564	(0)	3311199
1215	30.8	8.3	3.1	chr6	829630	830336	(169975643)	+	ERVL-E-int	LTR/ERVL	2844	3588	(2079)	3315286
2256	24.9	9.4	8.9	chr6	5438874	5439628	(165366351)	C	L1MEf	LINE/L1	(5440)	1038	281	3322034
16	20.2	0.0	4.1	chr6	16129126	16129174	(154676805)	+	G-rich	Low_complexity	1	49	(0)	3339045
1979	15.3	2.7	2.7	chr6	16168890	16169264	(154636715)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3339091
487	32.9	6.8	1.7	chr6	20873398	20873635	(149932344)	C	MIR	SINE/MIR	(1)	261	11	3346761
316	26.3	12.0	0.0	chr6	20873756	20873850	(149932129)	C	MamRep4096	DNA/hAT-Tip100	(317)	109	2	3346762
191	22.5	14.0	1.2	chr6	21601960	21602040	(149203939)	+	MIRb	SINE/MIR	161	253	(15)	3347927
4414	10.6	2.5	0.6	chr6	21653722	21654350	(149151629)	C	LTR9B	LTR/ERV1	(2)	642	2	3348041
462	8.0	1.3	8.5	chr6	21654351	21654410	(149151569)	+	MLT2B3	LTR/ERVL	508	561	(0)	3348040
317	12.8	0.0	0.0	chr6	21654411	21654457	(149151522)	C	MLT1B	LTR/ERVL-MaLR	(325)	49	3	3348038
259	30.3	7.8	9.5	chr6	21654459	21654733	(149151246)	C	L2b	LINE/L2	(691)	2728	2463	3348035
373	12.7	6.6	0.0	chr6	30597567	30597637	(140208342)	+	MER5A	DNA/hAT-Charlie	31	106	(83)	3361874
2279	8.5	0.7	0.0	chr6	30597994	30598310	(140207669)	C	AluSp	SINE/Alu	(0)	313	1	3361876
232	24.4	0.0	0.0	chr6	30598315	30598359	(140207620)	+	MER5A	DNA/hAT-Charlie	129	173	(16)	3361877
195	26.9	0.0	5.5	chr6	30598321	30598375	(140207604)	C	MER5B	DNA/hAT-Charlie	(124)	54	3	3361878
2110	9.6	5.1	0.0	chr6	30598461	30598741	(140207238)	C	AluSq	SINE/Alu	(16)	297	2	3361879
1929	15.4	1.7	0.3	chr6	30599376	30599667	(140206312)	C	AluJo	SINE/Alu	(7)	305	10	3361882
200	23.4	8.6	4.5	chr6	30599679	30599745	(140206234)	C	MIRc	SINE/MIR	(162)	106	37	3361883
18	20.3	0.0	0.0	chr6	30614692	30614726	(140191253)	+	(AC)n	Simple_repeat	1	35	(0)	3361894
917	14.3	18.8	0.4	chr6	30725538	30725762	(140080217)	+	MER2	DNA/TcMar-Tigger	37	312	(33)	3362087
391	24.4	4.7	0.0	chr6	30725854	30725935	(140080044)	C	AluJb	SINE/Alu	(79)	233	148	3362088
282	21.4	6.7	4.5	chr6	30726051	30726138	(140079841)	+	MER5A	DNA/hAT-Charlie	18	107	(82)	3362089
1172	13.6	4.4	15.2	chr6	30726257	30726552	(140079427)	+	AluJb	SINE/Alu	3	275	(37)	3362090
2019	11.8	1.3	1.0	chr6	30726553	30726857	(140079122)	C	AluSx1	SINE/Alu	(6)	306	1	3362091
15	13.7	0.0	0.0	chr6	32972077	32972100	(137833879)	+	(CG)n	Simple_repeat	1	24	(0)	3365688
12	17.0	9.2	4.2	chr6	33204797	33204861	(137601118)	+	(CTCTGACC)n	Simple_repeat	1	71	(0)	3365972
247	28.0	14.2	2.1	chr6	33454055	33454248	(137351731)	+	MIRb	SINE/MIR	20	253	(15)	3366469
18	7.0	0.0	5.9	chr6	34236747	34236780	(136569199)	+	(GCG)n	Simple_repeat	1	34	(0)	3367935
12	31.3	0.0	0.0	chr6	35259735	35259781	(135546198)	+	(GCGG)n	Simple_repeat	1	47	(0)	3369993
2770	15.8	7.4	0.2	chr6	35764321	35764832	(135041147)	C	LTR9B	LTR/ERV1	(0)	644	93	3371093
2049	10.8	3.7	0.0	chr6	36608167	36608454	(134197525)	+	AluSp	SINE/Alu	1	299	(14)	3372900
230	38.2	12.0	3.0	chr6	40918178	40918479	(129887500)	+	L2b	LINE/L2	3023	3355	(20)	3380302
4757	11.2	1.0	4.3	chr6	40918486	40919221	(129886758)	+	LTR1A2	LTR/ERV1	39	749	(88)	3380303
17	11.7	2.6	2.5	chr6	44297771	44297810	(126508169)	+	(CGCTGC)n	Simple_repeat	1	40	(0)	3386924
2993	0.3	0.0	0.3	chr6	52995620	52995951	(117810028)	+	7SK	RNA	1	331	(0)	3399374
23	9.7	0.0	6.0	chr6	52995981	52996040	(117809939)	+	(TTTTTAA)n	Simple_repeat	1	56	(0)	3399375
355	35.1	5.1	1.2	chr6	71929097	71929266	(98876713)	+	L2b	LINE/L2	3177	3353	(22)	3421227
415	28.0	14.1	1.8	chr6	73513209	73513481	(97292498)	+	L2a	LINE/L2	3111	3422	(4)	3423635
1493	11.5	1.5	0.0	chr6	73513823	73514022	(97291957)	+	AluSx1	SINE/Alu	14	216	(96)	3423637
841	16.9	2.0	1.4	chr6	73514023	73514170	(97291809)	C	AluJb	SINE/Alu	(37)	275	127	3423638
2292	7.4	1.1	0.3	chr6	73514185	73514468	(97291511)	C	AluY	SINE/Alu	(24)	287	2	3423639
957	17.0	23.6	0.0	chr6	73514470	73514693	(97291286)	C	AluSc8	SINE/Alu	(18)	293	1	3423640
1390	11.7	18.6	0.0	chr6	73514694	73514933	(97291046)	C	AluSx4	SINE/Alu	(3)	307	13	3423641
317	24.3	2.6	0.0	chr6	76120482	76120555	(94685424)	+	MamGypLTR3a	LTR/Gypsy	119	194	(787)	3427287
3692	21.7	10.2	4.2	chr6	85669834	85669979	(85136000)	C	L1MC5	LINE/L1	(1114)	8190	8004	3439413
270	22.9	0.0	0.0	chr6	85669982	85670042	(85135937)	+	Charlie13a	DNA/hAT-Charlie	842	902	(612)	3439415
205	28.2	13.1	1.1	chr6	85670044	85670211	(85135768)	+	L2a	LINE/L2	2857	3120	(306)	3439416
1600	18.6	0.7	1.8	chr6	85672150	85672434	(85133545)	+	AluJr	SINE/Alu	6	287	(25)	3439424
2600	14.0	8.9	0.4	chr6	89133968	89134448	(81671531)	C	LTR22B1	LTR/ERVK	(0)	526	1	3444253
3395	18.0	3.8	1.2	chr6	91298252	91298943	(79507036)	C	MER67C	LTR/ERV1	(0)	711	1	3447512
255	19.8	4.7	6.9	chr6	93820427	93820513	(76985466)	C	MLT1F	LTR/ERVL-MaLR	(4)	485	401	3450575
332	31.2	12.0	4.6	chr6	93820521	93820878	(76985101)	C	MLT1F	LTR/ERVL-MaLR	(115)	433	49	3450575
267	29.4	15.6	0.7	chr6	93821056	93821202	(76984777)	C	MIRb	SINE/MIR	(18)	250	78	3450576
773	36.5	8.2	1.3	chr6	93822292	93822746	(76983233)	+	L2	LINE/L2	2561	3049	(370)	3450577
3978	28.0	6.7	6.2	chr6	93822820	93824497	(76981482)	C	L1MEf	LINE/L1	(1199)	5120	3522	3450578
1519	21.0	1.7	3.6	chr6	93824498	93824633	(76981346)	+	MLT1A0	LTR/ERVL-MaLR	5	139	(226)	3450579
2896	1.0	0.0	0.0	chr6	93824634	93824936	(76981043)	C	AluYa5	SINE/Alu	(8)	303	1	3450580
1519	21.0	1.7	3.6	chr6	93824937	93825164	(76980815)	+	MLT1A0	LTR/ERVL-MaLR	140	362	(3)	3450579
1816	21.7	9.8	0.4	chr6	93825903	93826355	(76979624)	+	MLT1D	LTR/ERVL-MaLR	3	502	(3)	3450581
935	29.3	13.1	4.1	chr6	93826562	93827516	(76978463)	C	L1MEf	LINE/L1	(4025)	2375	1311	3450578
264	19.7	5.7	0.0	chr6	93827744	93827809	(76978170)	C	L1MEi	LINE/L1	(779)	1433	1364	3450582
4957	14.5	4.8	0.5	chr6	93828931	93829631	(76976348)	C	L1P3	LINE/L1	(1739)	4407	3688	3450584
2305	11.2	0.3	1.2	chr6	93829824	93830157	(76975822)	+	THE1C	LTR/ERVL-MaLR	1	331	(44)	3450586
3012	6.2	0.2	0.7	chr6	93830156	93830561	(76975418)	C	LTR7	LTR/ERV1	(46)	404	1	3450587
2791	12.8	7.8	0.4	chr6	97591970	97592456	(73213523)	C	LTR22B1	LTR/ERVK	(0)	526	1	3455228
3363	5.8	0.0	2.6	chr6	97779488	97779947	(73026032)	+	LTR7	LTR/ERV1	1	448	(2)	3455484
2451	8.8	4.6	1.3	chr6	97784493	97784871	(73021108)	+	HERVH-int	LTR/ERV1	7322	7713	(0)	3455484
3477	5.1	0.0	1.3	chr6	97784872	97785325	(73020654)	+	LTR7	LTR/ERV1	1	448	(2)	3455484
2308	10.6	0.3	0.0	chr6	106968708	106969009	(63836970)	+	AluSp	SINE/Alu	1	303	(10)	3467854
660	16.4	6.0	0.0	chr6	106969162	106969271	(63836708)	+	AluJo	SINE/Alu	1	117	(195)	3467855
298	21.8	26.2	2.8	chr6	108920685	108920939	(61885040)	C	LTR79	LTR/ERVL	(130)	397	62	3471370
411	34.3	6.2	5.2	chr6	109508258	109508684	(61297295)	+	MamGypLTR3a	LTR/Gypsy	105	536	(445)	3472289
1463	28.0	18.6	1.8	chr6	111253406	111254510	(59551469)	+	L2a	LINE/L2	2079	3424	(2)	3475302
852	29.4	14.5	0.0	chr6	111478894	111479199	(59326780)	+	Tigger19b	DNA/TcMar-Tigger	92	449	(101)	3475660
1081	28.2	9.2	1.7	chr6	125682867	125683552	(45122427)	+	L2a	LINE/L2	2674	3425	(1)	3494686
19825	13.8	3.9	0.4	chr6	125689892	125694345	(45111634)	C	L1PB2	LINE/L1	(2254)	4608	1	3494690
3673	5.8	0.2	0.7	chr6	131328688	131329137	(39476842)	+	LTR7	LTR/ERV1	1	448	(2)	3502167
1467	18.3	7.7	2.4	chr6	131914172	131914501	(38891478)	C	MSTD	LTR/ERVL-MaLR	(47)	349	1	3503099
886	8.7	0.0	1.1	chr6	131918082	131918228	(38887751)	+	L1MA1	LINE/L1	5239	5379	(810)	3503104
4889	20.0	6.1	0.9	chr6	131918253	131919316	(38886663)	+	L1PA13	LINE/L1	17	1139	(5646)	3503105
5948	10.3	2.4	2.0	chr6	131919320	131921049	(38884930)	+	L1PA13	LINE/L1	4435	6159	(4)	3503106
6165	10.1	0.9	0.5	chr6	131921045	131921989	(38883990)	+	L1MA1	LINE/L1	5354	6302	(0)	3503104
348	25.7	2.7	0.0	chr6	131922208	131922316	(38883663)	C	MER117	DNA/hAT-Charlie	(83)	114	3	3503108
1282	33.0	6.8	3.5	chr6	131922371	131923088	(38882891)	C	L1MEd	LINE/L1	(6312)	774	31	3503109
476	29.2	9.0	5.9	chr6	131923394	131923768	(38882211)	C	MamGypLTR3a	LTR/Gypsy	(100)	881	494	3503110
13	18.1	0.0	4.9	chr6	131951186	131951226	(38854753)	+	(GGCGAGC)n	Simple_repeat	1	41	(0)	3503158
2811	16.1	4.0	4.9	chr6	141388627	141389055	(29416924)	C	MER4B	LTR/ERV1	(183)	427	1	3517204
24954	6.0	0.4	0.3	chr6	141457062	141460290	(29345689)	+	HERVH-int	LTR/ERV1	4481	7713	(0)	3517294
2548	8.7	12.9	0.0	chr6	141460291	141460680	(29345299)	+	LTR7	LTR/ERV1	1	448	(2)	3517294
936	14.6	35.0	0.8	chr6	145531054	145531304	(25274675)	+	LTR22B1	LTR/ERVK	1	337	(159)	3522881
3799	11.3	1.8	0.2	chr6	145531305	145531851	(25274128)	+	HERVK22-int	LTR/ERVK	4524	5079	(1758)	3522882
19	19.2	0.0	0.0	chr6	155895070	155895105	(14910874)	+	(TG)n	Simple_repeat	1	36	(0)	3538704
1515	12.9	0.0	0.0	chr7	5524086	5524287	(153821686)	C	AluSx	SINE/Alu	(30)	282	81	3567244
1717	14.2	2.4	0.0	chr7	5524473	5524761	(153821212)	C	MER1A	DNA/hAT-Charlie	(0)	529	234	3567245
1017	16.4	0.0	1.3	chr7	5525180	5525338	(153820635)	C	AluJr	SINE/Alu	(19)	293	137	3567248
255	26.9	0.0	0.0	chr7	5525340	5525406	(153820567)	C	L1MA10	LINE/L1	(64)	6270	6204	3567249
332	33.9	2.5	5.9	chr7	5525419	5525622	(153820351)	+	L2c	LINE/L2	3191	3387	(0)	3567250
6143	11.9	1.1	1.0	chr7	6901997	6902963	(152443010)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3570363
3819	10.2	18.3	0.3	chr7	12328988	12329746	(147016227)	C	MER4D1	LTR/ERV1	(0)	900	1	3577256
3122	8.4	0.2	2.2	chr7	20120709	20121160	(139224813)	+	LTR7	LTR/ERV1	1	443	(7)	3587313
14390	12.1	3.1	2.1	chr7	20121169	20124011	(139221962)	+	HERVH-int	LTR/ERV1	1	2995	(4718)	3587313
2337	9.7	4.9	1.3	chr7	20125724	20126099	(139219874)	+	HERVH-int	LTR/ERV1	7324	7713	(0)	3587313
3168	8.1	0.5	2.2	chr7	20126100	20126555	(139219418)	+	LTR7	LTR/ERV1	1	448	(2)	3587313
870	15.4	8.1	0.3	chr7	22861209	22861431	(136484542)	+	MER33	DNA/hAT-Charlie	5	225	(99)	3591352
306	32.4	8.9	1.7	chr7	24408258	24408433	(134937540)	+	L3b	LINE/CR1	4926	5115	(117)	3593823
640	21.0	5.4	1.9	chr7	24409807	24409966	(134936007)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	3593824
670	31.2	11.0	7.6	chr7	24427161	24427822	(134918151)	+	LTR85c	LTR/Gypsy?	11	803	(20)	3593855
514	23.6	9.8	1.7	chr7	26187605	26187781	(133158192)	+	MER2	DNA/TcMar-Tigger	127	319	(26)	3596578
11	27.8	0.0	2.2	chr7	31466139	31466183	(127879790)	+	A-rich	Low_complexity	1	45	(0)	3604724
340	35.5	6.8	6.8	chr7	46534920	46535270	(112810703)	C	L2b	LINE/L2	(2)	3373	3023	3627353
2321	17.1	10.6	1.9	chr7	53326582	53327123	(106018850)	+	LTR49	LTR/ERV1	1	595	(0)	3636076
4622	10.7	0.0	1.1	chr7	71456720	71457364	(87888609)	C	MER4A	LTR/ERV1	(2)	662	25	3660235
4172	10.3	0.0	0.4	chr7	71457370	71457925	(87888048)	C	MER41A	LTR/ERV1	(0)	554	1	3660236
1217	26.4	10.2	6.1	chr7	83211762	83212447	(76133526)	+	Kanga2_a	DNA/TcMar-Tc2	24	740	(148)	3681958
1565	27.5	7.0	1.9	chr7	83465447	83465976	(75879997)	+	LTR82B	LTR/ERVL	184	742	(88)	3682297
1820	16.4	0.0	0.7	chr7	83467058	83467331	(75878642)	C	AluJb	SINE/Alu	(5)	307	36	3682299
1019	23.7	0.9	0.9	chr7	83467525	83467741	(75878232)	C	MER58A	DNA/hAT-Charlie	(2)	222	6	3682300
221	34.7	8.7	3.1	chr7	83467753	83467850	(75878123)	+	L2b	LINE/L2	3257	3360	(15)	3682301
283	33.1	0.0	8.6	chr7	84228620	84228758	(75117215)	+	LTR33	LTR/ERVL	93	219	(296)	3683287
1737	19.9	1.0	1.0	chr7	92764130	92764436	(66581537)	C	AluJb	SINE/Alu	(5)	307	1	3694393
935	20.1	5.7	2.1	chr7	96723484	96723773	(62622200)	+	MER33	DNA/hAT-Charlie	2	302	(22)	3699761
610	26.4	8.5	0.6	chr7	96723828	96724010	(62621963)	C	MIR	SINE/MIR	(0)	262	64	3699762
24	15.4	1.5	6.1	chr7	99438954	99439018	(59906955)	+	(GGC)n	Simple_repeat	1	66	(0)	3704735
1579	15.3	4.5	7.2	chr7	100148165	100148485	(59197488)	C	AluJr	SINE/Alu	(0)	312	1	3705967
19	21.9	7.3	4.2	chr7	100436191	100436300	(58909673)	+	G-rich	Low_complexity	1	118	(0)	3706570
626	28.1	10.3	2.6	chr7	101302809	101303192	(58042781)	+	L1M2	LINE/L1	11	427	(6422)	3708463
6260	11.9	1.4	1.0	chr7	119100247	119101210	(40244763)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	3734768
3495	18.0	2.4	2.9	chr7	121938115	121938829	(37407144)	C	MER67C	LTR/ERV1	(0)	711	1	3738415
478	28.6	17.6	0.9	chr7	131553490	131553701	(27792272)	C	MIRb	SINE/MIR	(13)	255	1	3753004
184	25.0	2.2	0.0	chr7	131553828	131553871	(27792102)	C	MIR1_Amn	SINE/MIR	(75)	155	111	3753005
2808	13.9	12.7	5.0	chr7	138205624	138206166	(21139807)	+	LTR49	LTR/ERV1	1	591	(4)	3763125
355	28.4	2.1	4.1	chr7	146212802	146212948	(13133025)	C	Plat_L3	LINE/CR1	(1230)	2356	2213	3775573
1320	21.0	8.3	6.1	chr7	147436540	147437079	(11908894)	C	MER67C	LTR/ERV1	(1)	513	2	3777250
16	22.2	3.3	3.2	chr7	149126047	149126118	(10219855)	+	(CCAGGC)n	Simple_repeat	1	72	(0)	3780094
1990	13.0	4.4	0.0	chr7	149186273	149186557	(10159416)	C	AluSx1	SINE/Alu	(13)	299	2	3780245
287	27.1	2.8	0.0	chr7	150401969	150402038	(8943935)	+	MIRb	SINE/MIR	42	113	(155)	3782009
211	29.8	7.8	1.1	chr7	150401994	150402088	(8943885)	+	L2c	LINE/L2	3268	3369	(18)	3782010
386	19.4	2.7	0.0	chr7	150402029	150402100	(8943873)	+	MIRb	SINE/MIR	195	268	(0)	3782009
3218	16.6	6.0	5.7	chr7	150735948	150736651	(8609322)	+	MER67C	LTR/ERV1	1	706	(5)	3782392
392	28.1	5.1	0.7	chr7	152969295	152969494	(6376479)	C	MER4B-int	LTR/ERV1	(4636)	1551	1190	3786274
419	15.4	0.0	0.0	chr7	152969561	152969625	(6376348)	C	MER34C_	LTR/ERV1	(361)	224	160	3786280
1849	14.3	0.4	0.7	chr7	158728312	158728591	(617382)	C	AluJb	SINE/Alu	(20)	292	14	3793617
18	4.0	0.0	3.6	chr8	544659	544686	(144593950)	+	(GGC)n	Simple_repeat	1	28	(0)	3794932
14	11.5	0.0	3.3	chr8	544866	544895	(144593741)	+	(GGGCG)n	Simple_repeat	1	30	(0)	3794933
384	29.7	3.9	2.8	chr8	9264494	9264673	(135873963)	C	MIR	SINE/MIR	(1)	261	80	3806206
256	16.1	9.2	3.0	chr8	20353292	20353375	(124785261)	C	UCON132b	DNA/hAT-Tip100	(27)	121	43	3822696
325	27.7	5.0	7.5	chr8	20353378	20353541	(124785095)	+	MIR3	SINE/MIR	14	165	(43)	3822697
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
2129	20.7	12.3	1.6	chr8	38402819	38403369	(106735267)	C	MLT1E3	LTR/ERVL-MaLR	(2)	622	5	3852236
2313	10.2	0.3	1.3	chr8	38406319	38406633	(106732003)	+	AluSx1	SINE/Alu	1	312	(0)	3852240
4821	19.3	4.0	1.9	chr8	63435228	63436252	(81702384)	C	Tigger6a	DNA/TcMar-Tigger	(36)	1047	1	3883257
3248	6.6	1.3	1.1	chr8	71680214	71680660	(73457976)	+	LTR7	LTR/ERV1	1	448	(2)	3895532
2065	11.9	3.0	6.6	chr8	71680939	71681288	(73457348)	+	MER1B	DNA/hAT-Charlie	3	339	(0)	3895533
624	24.7	3.3	1.7	chr8	71698408	71698584	(73440052)	+	ERV3-16A3_I-int	LTR/ERVL	2846	3025	(2201)	3895554
843	26.9	6.7	1.9	chr8	71698609	71699021	(73439615)	+	L1ME3A	LINE/L1	1697	2130	(4973)	3895555
285	28.6	8.9	0.3	chr8	71703108	71703230	(73435406)	+	MIRb	SINE/MIR	129	262	(0)	3895562
621	27.0	12.0	5.7	chr8	71703347	71703750	(73434886)	+	L4_A_Mam	LINE/RTE-X	4544	4976	(14)	3895563
346	27.0	3.7	4.1	chr8	71706573	71706774	(73431862)	C	MER102b	DNA/hAT-Charlie	(28)	303	108	3895566
217	28.6	1.2	9.7	chr8	71707962	71708054	(73430582)	C	MIR	SINE/MIR	(112)	150	66	3895568
1962	16.1	13.2	2.9	chr8	73001833	73002353	(72136283)	+	LTR49	LTR/ERV1	1	619	(3)	3897229
28	0.0	0.0	0.0	chr8	73009049	73009074	(72129562)	+	(GAG)n	Simple_repeat	1	26	(0)	3897250
5689	8.5	0.5	0.9	chr8	81895710	81896493	(63242143)	+	MER4E1	LTR/ERV1	1	781	(0)	3909926
4211	10.6	16.9	1.8	chr8	93216301	93217062	(51921574)	C	MER4D1	LTR/ERV1	(0)	900	1	3924873
2880	11.4	4.6	2.0	chr8	100914765	100915204	(44223432)	C	MER1A	DNA/hAT-Charlie	(1)	528	77	3937781
603	27.1	13.5	1.8	chr8	103676008	103676236	(41462400)	C	MER34C	LTR/ERV1	(173)	378	119	3942629
5976	16.0	1.0	4.8	chr8	103676243	103676700	(41461936)	C	MER57A-int	LTR/ERV1	(5094)	1093	668	3942623
17383	19.3	2.1	1.1	chr8	111147590	111153176	(33985460)	C	L1PA16	LINE/L1	(715)	6070	501	3953133
2452	14.6	9.7	1.7	chr8	111916820	111917300	(33221336)	+	LTR22B1	LTR/ERVK	3	526	(0)	3954127
6747	10.5	0.3	0.9	chr8	112772174	112773142	(32365494)	+	LTR5_Hs	LTR/ERVK	1	963	(5)	3955274
5485	13.8	1.0	2.0	chr8	114297784	114298691	(30839945)	+	L1PA16	LINE/L1	5267	6165	(1)	3957184
4680	7.2	0.2	0.0	chr8	124450022	124450574	(20688062)	C	MER41A	LTR/ERV1	(0)	554	1	3973736
418	32.0	4.4	1.9	chr8	127741885	127742040	(17396596)	C	MIRb	SINE/MIR	(53)	215	56	3979963
530	28.8	8.6	2.5	chr8	127742153	127742348	(17396288)	C	MIR	SINE/MIR	(19)	243	35	3979964
238	35.8	8.7	1.0	chr8	128581802	128581897	(16556739)	C	MER91A	DNA/hAT-Tip100	(17)	179	76	3981739
246	35.3	0.0	4.7	chr8	128581916	128582022	(16556614)	+	L2b	LINE/L2	3011	3112	(263)	3981740
84	21.7	4.7	3.1	chr8	128582026	128582301	(16556335)	+	(CCTT)n	Simple_repeat	1	289	(0)	3981741
2600	16.8	6.4	1.9	chr8	129514950	129515489	(15623147)	+	LTR49	LTR/ERV1	1	566	(29)	3983293
2580	7.7	12.9	0.0	chr8	131310175	131310564	(13828072)	+	LTR7	LTR/ERV1	1	448	(2)	3986646
20874	9.3	5.4	1.9	chr8	131310567	131313738	(13824898)	+	HERVH-int	LTR/ERV1	1	3290	(4423)	3986646
2307	12.0	0.0	0.0	chr8	131319692	131319992	(13818644)	+	AluSg	SINE/Alu	1	301	(9)	3986651
601	23.6	12.1	1.4	chr8	131320548	131320687	(13817949)	+	FRAM	SINE/Alu	1	157	(19)	3986653
205	33.0	5.2	6.0	chr8	131392520	131392635	(13746001)	C	OldhAT1	DNA/hAT-Ac	(2586)	262	148	3986767
2287	10.3	2.3	0.0	chr8	131392763	131393063	(13745573)	C	AluSp	SINE/Alu	(5)	308	1	3986768
14	18.4	4.4	2.1	chr8	133297284	133297328	(11841308)	+	(GCGCCCC)n	Simple_repeat	1	47	(0)	3990150
669	29.4	7.5	2.0	chr8	134710213	134710554	(10428082)	+	MER65D	LTR/ERV1	17	423	(50)	3992723
5968	13.0	4.2	1.1	chr8	140331643	140332615	(4806021)	+	L1MA5	LINE/L1	5301	6296	(4)	4001760
13	19.8	4.0	3.9	chr9	34652418	34652467	(103742250)	+	(TGCATG)n	Simple_repeat	1	52	(0)	4057745
20	6.9	0.0	0.0	chr9	35072557	35072587	(103322130)	+	(GGCAGC)n	Simple_repeat	1	31	(0)	4058317
21	9.5	0.0	0.0	chr9	35489590	35489623	(102905094)	+	(CCCAC)n	Simple_repeat	1	34	(0)	4058938
14	16.8	8.5	0.0	chr9	38214705	38214751	(100179966)	+	GA-rich	Low_complexity	1	51	(0)	4064171
5524	10.8	1.8	4.2	chr9	71920843	71921736	(66472981)	+	MER4D0	LTR/ERV1	1	872	(0)	4085517
3483	5.1	0.2	0.7	chr9	74085583	74086032	(64308685)	+	LTR7	LTR/ERV1	1	448	(2)	4088921
3292	5.8	0.0	5.9	chr9	74090961	74091436	(64303281)	+	LTR7	LTR/ERV1	1	448	(2)	4088921
277	5.7	0.0	0.0	chr9	74091506	74091540	(64303177)	C	LTR7B	LTR/ERV1	(429)	35	1	4088922
6353	14.0	1.7	5.7	chr9	77128201	77128876	(61265841)	C	MSTA-int	LTR/ERVL-MaLR	(518)	1133	476	4093793
193	30.5	10.8	3.9	chr9	78319652	78319832	(60074885)	C	L2b	LINE/L2	(183)	3192	2998	4095592
742	24.0	11.1	0.5	chr9	83965134	83965342	(54429375)	C	LTR16A1	LTR/ERVL	(0)	456	223	4103841
1164	9.5	0.0	0.0	chr9	83965530	83965676	(54429041)	C	AluSq	SINE/Alu	(19)	294	148	4103842
2297	8.9	0.0	0.3	chr9	87409981	87410273	(50984444)	C	AluSq2	SINE/Alu	(11)	302	11	4109434
560	29.2	13.0	2.2	chr9	87410274	87410379	(50984338)	C	L1M5	LINE/L1	(657)	5467	5360	4109433
342	20.2	2.7	11.4	chr9	87421747	87421817	(50972900)	C	LTR16A2	LTR/ERVL	(51)	444	382	4109447
343	30.6	7.5	4.2	chr9	87421818	87422295	(50972422)	+	L2c	LINE/L2	2893	3387	(0)	4109449
2086	13.3	11.1	0.0	chr9	87423024	87423375	(50971342)	+	MER57B2	LTR/ERV1	8	403	(0)	4109451
356	32.1	4.9	4.8	chr9	88378167	88378504	(50016213)	C	L2c	LINE/L2	(1)	3386	2741	4111053
194	10.7	0.0	0.0	chr9	88378565	88378592	(50016125)	C	L2b	LINE/L2	(5)	3370	3343	4111054
1296	20.4	7.9	0.0	chr9	93355877	93356131	(45038586)	+	AluJr	SINE/Alu	6	282	(30)	4118034
3070	11.6	4.9	0.4	chr9	93356412	93356862	(45037855)	+	MER4A1	LTR/ERV1	1	472	(0)	4118035
4487	7.5	5.7	0.9	chr9	93358348	93359031	(45035686)	+	MER4-int	LTR/ERV1	1763	2481	(4117)	4118036
2347	10.2	0.0	0.0	chr9	93359033	93359326	(45035391)	+	AluY	SINE/Alu	1	294	(17)	4118038
1374	23.7	6.0	4.8	chr9	93364733	93365229	(45029488)	+	MLT1D	LTR/ERVL-MaLR	1	503	(2)	4118048
206	25.2	6.6	2.0	chr9	93366689	93366789	(45027928)	C	L2a	LINE/L2	(978)	2441	2336	4118046
2233	9.7	0.0	0.3	chr9	93367297	93367584	(45027133)	C	AluSx1	SINE/Alu	(25)	287	1	4118050
3092	7.1	2.2	7.2	chr9	97214494	97214965	(41179752)	+	LTR7	LTR/ERV1	1	448	(2)	4124161
9076	9.9	1.8	5.8	chr9	97214968	97216579	(41178138)	+	HERVH-int	LTR/ERV1	1	1546	(6167)	4124161
241	31.4	1.9	10.3	chr9	100594053	100594169	(37800548)	+	L3b	LINE/CR1	4926	5032	(200)	4130437
3451	18.0	6.3	9.3	chr9	111529833	111530739	(26863978)	+	MER21C	LTR/ERVL	55	932	(6)	4148048
16	26.6	0.0	2.0	chr9	111631460	111631510	(26763207)	+	(GCT)n	Simple_repeat	1	51	(0)	4148269
1999	18.8	9.4	4.0	chr9	115479905	115480408	(22914309)	C	MLT2B4	LTR/ERVL	(5)	551	18	4155656
2049	10.6	3.8	1.1	chr9	115480420	115480703	(22914014)	+	AluSq2	SINE/Alu	5	296	(17)	4155657
190	34.0	3.0	1.0	chr9	115481553	115481650	(22913067)	+	L2a	LINE/L2	3312	3411	(15)	4155661
13	19.8	9.0	2.7	chr9	118929058	118929125	(19465592)	+	GA-rich	Low_complexity	1	72	(0)	4162008
841	30.5	9.2	7.5	chr9	120692507	120693085	(17701632)	+	L2c	LINE/L2	2791	3380	(7)	4165509
36	4.6	0.0	2.1	chr9	122905288	122905334	(15489383)	+	(CCT)n	Simple_repeat	1	47	(0)	4169756
16	21.4	1.9	3.8	chr9	122941035	122941086	(15453631)	+	(GGC)n	Simple_repeat	1	53	(0)	4169822
12	7.5	6.7	3.1	chr9	122941107	122941136	(15453581)	+	(TCC)n	Simple_repeat	1	32	(0)	4169823
180	24.5	3.6	5.4	chr9	123863395	123863450	(14531267)	+	L3	LINE/CR1	869	923	(3176)	4171390
1158	12.0	0.5	3.7	chr9	125390285	125390475	(13004242)	C	L1MA2	LINE/L1	(0)	6304	6120	4174574
2166	11.6	0.0	0.3	chr9	125390481	125390772	(13003945)	+	AluSx	SINE/Alu	6	296	(16)	4174575
441	29.4	4.0	0.2	chr9	126676624	126676823	(11717894)	+	MIR3	SINE/MIR	47	258	(10)	4176813
213	18.2	17.8	4.3	chr9	127447080	127447171	(10947546)	C	MER5B	DNA/hAT-Charlie	(0)	178	72	4178228
1660	12.1	13.4	0.4	chr9	127447256	127447520	(10947197)	+	AluSp	SINE/Alu	1	305	(8)	4178229
268	26.7	0.0	12.6	chr9	127795766	127795868	(10598849)	C	MIRb	SINE/MIR	(114)	154	65	4179029
472	30.2	6.2	5.9	chr9	127795882	127796088	(10598629)	+	MIRb	SINE/MIR	13	222	(46)	4179030
1245	21.5	2.7	3.7	chr9	128697377	128697674	(9697043)	+	AluJo	SINE/Alu	2	296	(16)	4181117
206	31.7	3.6	0.0	chr9	133328093	133328175	(5066542)	+	L2c	LINE/L2	3249	3338	(37)	4190406
1576	6.9	0.0	5.1	chr9	133335690	133335905	(5058812)	+	AluY	SINE/Alu	107	311	(0)	4190430
2261	9.1	1.3	1.3	chr9	136801780	136802087	(1592630)	C	AluSx1	SINE/Alu	(4)	308	1	4194824
14	23.8	5.8	4.4	chr9	137680045	137680130	(714587)	+	(TGTATCC)n	Simple_repeat	1	91	(0)	4196024
1553	18.7	0.0	6.5	chrX	322379	322688	(155718207)	+	AluJo	SINE/Alu	2	291	(21)	4358407
1935	11.7	0.0	0.0	chrX	322710	322966	(155717929)	+	AluSx	SINE/Alu	4	260	(52)	4358408
16	12.1	5.6	0.0	chrX	1399126	1399161	(154641734)	+	G-rich	Low_complexity	1	38	(0)	4360900
234	30.7	1.3	0.0	chrX	1418347	1418421	(154622474)	+	MLT1J	LTR/ERVL-MaLR	231	306	(206)	4360948
309	22.9	6.8	0.0	chrX	1418461	1418556	(154622339)	+	MLT1J	LTR/ERVL-MaLR	211	313	(199)	4360949
165	29.9	0.4	0.6	chrX	1419907	1420411	(154620484)	+	(TCTC)n	Simple_repeat	1	507	(0)	4360950
2778	14.0	0.5	0.2	chrX	4903286	4903748	(151137147)	C	LTR9D	LTR/ERV1	(177)	551	1	4367579
266	21.2	1.5	1.5	chrX	36950633	36950699	(119090196)	C	LTR49-int	LTR/ERV1	(5136)	1195	1129	4417004
448	28.4	5.9	7.1	chrX	40853021	40853259	(115187636)	+	MIRb	SINE/MIR	32	267	(1)	4423179
1624	21.9	11.9	2.0	chrX	40879111	40879180	(115161715)	C	LTR16C	LTR/ERVL	(2)	487	423	4423223
3250	5.6	0.2	10.4	chrX	64657168	64657665	(91383230)	+	LTR7	LTR/ERV1	2	448	(2)	4451579
224	38.2	4.4	10.0	chrX	71238509	71238793	(84802102)	+	L2c	LINE/L2	2591	2865	(554)	4461109
218	36.4	3.1	11.5	chrX	71238771	71238901	(84801994)	+	L2c	LINE/L2	3058	3184	(203)	4461109
1645	18.1	0.7	0.7	chrX	71238902	71239188	(84801707)	C	AluJb	SINE/Alu	(25)	287	1	4461115
2405	9.8	0.0	0.0	chrX	78134956	78135252	(77905643)	C	AluSx1	SINE/Alu	(15)	297	1	4469555
1631	18.1	3.3	0.7	chrX	92097136	92097427	(63943468)	+	AluJo	SINE/Alu	1	300	(12)	4484167
2170	10.6	0.3	0.7	chrX	92098637	92098946	(63941949)	C	AluSp	SINE/Alu	(0)	313	1	4484171
5463	8.5	2.4	0.0	chrX	92831060	92831821	(63209074)	+	MER4E1	LTR/ERV1	1	781	(0)	4484949
1070	28.2	10.0	3.6	chrX	114472534	114473762	(41567133)	+	L1MEd	LINE/L1	1218	2513	(3702)	4514130
258	22.9	4.7	0.0	chrX	114582627	114582687	(41458208)	C	MIR1_Amn	SINE/MIR	(80)	150	87	4514269
30	0.0	0.0	0.0	chrX	114583752	114583777	(41457118)	+	(GT)n	Simple_repeat	1	26	(0)	4514270
18	7.6	0.0	0.0	chrX	114584534	114584561	(41456334)	+	(GCGCA)n	Simple_repeat	1	28	(0)	4514272
2593	13.5	2.6	0.7	chrX	125381997	125382407	(30658488)	C	MSTB	LTR/ERVL-MaLR	(0)	426	8	4530050
2353	11.9	5.4	0.0	chrY	5946723	5947075	(51280340)	C	MER51B	LTR/ERV1	(4)	373	1	4582921
10957	28.1	0.5	0.1	chrY	26643208	26653351	(30574064)	+	(AATGG)n	Simple_repeat	1	10181	(0)	4607159
5755	20.0	1.6	1.8	chrY	56673416	56771507	(455908)	+	(AATGGAATGG)n	Simple_repeat	1	97964	(0)	4607180