5795	23.2	8.1	3.5	chr1	5674974	5676196	(243280226)	C	L1MEc	LINE/L1	(4878)	1522	234	7075
810	8.7	0.0	4.2	chr1	11908152	11908271	(237048151)	+	U5	snRNA	1	115	(1)	18706
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
768	7.9	0.0	5.0	chr1	11909807	11909926	(237046496)	C	U5	snRNA	(1)	115	2	18711
506	27.6	8.7	1.5	chr1	12497836	12498037	(236458385)	+	Charlie22a	DNA/hAT-Charlie	36	253	(238)	19868
213	28.2	2.7	4.0	chr1	16237416	16237489	(232718933)	+	MIR	SINE/MIR	108	182	(48)	26999
13	18.3	0.0	3.0	chr1	16237498	16237530	(232718892)	+	(TTA)n	Simple_repeat	1	33	(0)	27000
212	31.5	4.4	4.4	chr1	16237545	16237657	(232718765)	C	MIR3	SINE/MIR	(26)	182	70	27001
2041	16.7	0.0	1.0	chr1	16615322	16615632	(232340790)	+	AluJb	SINE/Alu	2	309	(3)	27822
2442	8.6	0.3	0.0	chr1	16616418	16616718	(232339704)	+	AluSz	SINE/Alu	1	302	(10)	27826
443	19.1	6.7	0.0	chr1	16616721	16616804	(232339618)	C	FLAM_C	SINE/Alu	(33)	110	21	27827
2240	9.7	3.9	0.0	chr1	16624670	16624969	(232331453)	+	AluSz	SINE/Alu	1	312	(0)	27844
1971	12.1	0.7	4.9	chr1	16629657	16629961	(232326461)	C	AluSx1	SINE/Alu	(18)	294	3	27855
1674	7.6	0.0	3.6	chr1	16629962	16630010	(232326412)	C	AluYj4	SINE/Alu	(177)	134	88	27853
2296	11.7	0.0	0.0	chr1	16635031	16635337	(232321085)	C	AluSx	SINE/Alu	(5)	307	1	27866
1037	20.8	4.8	0.0	chr1	16643865	16644061	(232312361)	C	MER3	DNA/hAT-Charlie	(0)	209	3	27883
1541	0.0	0.0	0.0	chr1	16895980	16896143	(232060279)	+	U1	snRNA	1	164	(1)	28204
4196	15.3	4.0	2.3	chr1	17360311	17360529	(231595893)	C	LTR62	LTR/ERVL	(487)	222	1	29249
21	7.7	0.0	0.0	chr1	23531239	23531266	(225425156)	+	(T)n	Simple_repeat	1	28	(0)	42654
200	36.4	1.5	0.0	chr1	26770916	26770981	(222185441)	C	Tigger19a	DNA/TcMar-Tigger	(220)	103	37	50143
1314	14.9	12.9	0.0	chr1	28510357	28510605	(220445817)	+	AluSc	SINE/Alu	2	287	(22)	54383
517	16.5	6.7	0.0	chr1	28983407	28983503	(219972919)	+	MER5A1	DNA/hAT-Charlie	2	105	(61)	55664
3654	9.9	0.4	5.2	chr1	29156731	29157306	(219799116)	C	LTR14	LTR/ERVK	(0)	548	1	56047
505	19.0	25.6	0.0	chr1	30778294	30778456	(218177966)	+	MIR	SINE/MIR	21	239	(23)	59041
2927	19.7	2.2	12.8	chr1	31171162	31171364	(217785058)	+	LTR8	LTR/ERV1	1	192	(499)	60029
2376	7.8	0.0	0.3	chr1	31171365	31171660	(217784762)	C	AluY	SINE/Alu	(15)	296	2	60030
1630	10.2	14.0	1.9	chr1	31936171	31936426	(217019996)	+	AluSz	SINE/Alu	16	307	(5)	61647
306	0.0	0.0	0.0	chr1	31936471	31936503	(217019919)	+	U2	snRNA	1	33	(155)	61648
325	27.2	6.2	6.2	chr1	32101160	32101304	(216855118)	C	MIRb	SINE/MIR	(28)	240	96	62078
472	31.1	0.7	3.2	chr1	32101595	32101750	(216854672)	C	MIR3	SINE/MIR	(41)	167	16	62079
1449	24.3	9.8	0.4	chr1	33110261	33110776	(215845646)	+	L1ME3E	LINE/L1	610	1179	(5924)	64462
411	23.5	8.0	10.1	chr1	33110781	33110998	(215845424)	C	LTR41B	LTR/ERVL	(18)	740	528	64463
1998	20.3	7.9	3.1	chr1	33223918	33224426	(215731996)	+	L1MEg	LINE/L1	567	1105	(5120)	64700
2000	13.8	1.0	1.3	chr1	35188675	35188972	(213767450)	+	AluSz	SINE/Alu	1	297	(15)	68198
852	26.9	8.0	6.5	chr1	40475261	40475690	(208480732)	C	L1MEg	LINE/L1	(4918)	1307	871	78879
2752	22.8	15.8	8.2	chr1	42201508	42202086	(206754336)	C	L1ME3	LINE/L1	(1452)	4111	3435	82104
943	14.5	11.6	6.0	chr1	42202105	42202404	(206754018)	C	L1MEc	LINE/L1	(5223)	1177	859	82104
185	39.6	8.8	2.9	chr1	42228626	42228763	(206727659)	C	MIR1_Amn	SINE/MIR	(83)	147	1	82148
451	32.1	8.2	6.6	chr1	42228998	42229407	(206727015)	+	L2c	LINE/L2	2962	3378	(9)	82149
361	31.7	8.4	3.5	chr1	42961365	42961701	(205994721)	C	L2c	LINE/L2	(7)	3368	3036	83436
788	26.7	6.0	0.9	chr1	43650656	43650878	(205305544)	C	MIRb	SINE/MIR	(8)	260	26	84649
3342	22.4	12.3	3.5	chr1	43808456	43809419	(205147003)	+	L1MEc	LINE/L1	91	1177	(5223)	84966
1891	15.1	2.0	1.0	chr1	43809420	43809711	(205146711)	+	AluJr4	SINE/Alu	1	295	(17)	84967
975	29.2	5.4	7.1	chr1	43818379	43818907	(205137515)	+	L1MEd	LINE/L1	526	1051	(6035)	84986
1479	22.0	2.1	4.9	chr1	43818908	43819103	(205137319)	C	MER58B	DNA/hAT-Charlie	(1)	340	157	84987
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
1001	16.8	11.2	0.0	chr1	44730709	44730899	(204225523)	+	AluSx4	SINE/Alu	7	221	(89)	86588
632	17.4	0.0	0.9	chr1	44731055	44731170	(204225252)	C	U5	snRNA	(1)	115	1	86589
757	24.1	2.4	0.6	chr1	44819664	44819825	(204136597)	C	AluSx	SINE/Alu	(35)	277	113	86771
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
16	25.8	0.0	0.0	chr1	47229392	47229429	(201726993)	+	GA-rich	Low_complexity	1	38	(0)	91123
1195	25.7	10.0	5.9	chr1	52534881	52535509	(196420913)	C	HAL1	LINE/L1	(921)	1586	923	101049
1089	27.3	7.8	9.7	chr1	54072111	54072395	(194884027)	C	L1MEd	LINE/L1	(5888)	1198	908	104350
2423	8.0	0.0	0.3	chr1	54072396	54072694	(194883728)	C	AluSc	SINE/Alu	(11)	298	1	104352
2231	26.7	9.5	2.9	chr1	85620757	85621664	(163334758)	+	L1MEd	LINE/L1	158	1118	(5968)	154473
190	30.9	2.4	5.8	chr1	85621708	85621793	(163334629)	+	L2c	LINE/L2	3297	3379	(8)	154475
359	15.3	0.0	0.0	chr1	90826068	90826134	(158130288)	C	MLT2B2	LTR/ERVL	(0)	567	489	161841
38	38.4	0.0	4.1	chr1	90826142	90826337	(158130085)	+	(ATACAC)n	Simple_repeat	1	196	(0)	161842
45	47.4	0.0	0.0	chr1	90826338	90826360	(158130062)	+	(TATA)n	Simple_repeat	4	222	(0)	161843
2325	20.4	5.5	7.4	chr1	109079079	109079170	(139877252)	C	MLT1F2	LTR/ERVL-MaLR	(466)	94	1	187934
742	21.0	10.3	12.4	chr1	109079171	109079274	(139877148)	+	MER20B	DNA/hAT-Charlie	684	782	(1)	187933
1232	21.6	14.4	0.0	chr1	109079323	109079702	(139876720)	+	L1ME5	LINE/L1	5745	6188	(6)	187936
19523	13.1	6.1	3.8	chr1	113626217	113631419	(135325003)	C	L1MA3	LINE/L1	(2254)	5311	4	195291
22	17.3	6.4	3.6	chr1	116679845	116679922	(132276500)	+	(CTCTT)n	Simple_repeat	1	83	(0)	200095
1273	6.1	0.0	1.8	chr1	120850818	120850985	(128105437)	C	U1	snRNA	(0)	165	1	206170
961	20.0	0.0	0.0	chr1	120942600	120942764	(128013658)	+	U1	snRNA	1	165	(0)	206303
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
1554	10.1	0.9	0.0	chr1	145407195	145407403	(103549019)	+	L1PA6	LINE/L1	5909	6119	(35)	210904
34	5.1	0.0	0.0	chr1	145407409	145407449	(103548973)	+	(ACATGTAT)n	Simple_repeat	1	41	(0)	210905
60	20.3	4.2	0.7	chr1	145407456	145407599	(103548823)	+	(TA)n	Simple_repeat	1	150	(0)	210906
1502	1.2	0.0	0.0	chr1	145465617	145465780	(103490642)	C	U1	snRNA	(1)	164	1	210998
2228	8.4	0.7	0.7	chr1	146035980	146036276	(102920146)	C	AluSq	SINE/Alu	(16)	297	1	211989
220	22.9	3.7	11.0	chr1	146051838	146051955	(102904467)	C	AluSg4	SINE/Alu	(190)	120	12	212031
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
566	19.4	6.1	4.3	chr1	146409903	146410064	(102546358)	+	U1	snRNA	1	165	(0)	212614
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
1505	0.6	0.0	0.0	chr1	148038753	148038916	(100917506)	C	U1	snRNA	(1)	164	1	215030
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
1359	4.3	1.2	0.0	chr1	148388490	148388651	(100567771)	C	U1	snRNA	(1)	164	1	215621
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
312	22.4	1.6	11.2	chr1	149637049	149637182	(99319240)	+	AluSz	SINE/Alu	2	122	(190)	217502
952	28.2	5.5	7.2	chr1	150604929	150605065	(98351357)	C	LTR78	LTR/ERV1	(904)	400	269	219439
771	12.6	0.0	0.0	chr1	151629324	151629426	(97326996)	+	U6	snRNA	1	103	(4)	221625
26	23.3	2.6	1.3	chr1	151629439	151629450	(97326972)	+	(AT)n	Simple_repeat	1	12	(0)	221626
46	5.8	6.3	2.0	chr1	151629451	151629545	(97326877)	+	(GTATATATAC)n	Simple_repeat	1	101	(0)	221627
26	23.3	2.6	1.3	chr1	151629546	151629586	(97326836)	+	(AT)n	Simple_repeat	1	42	(0)	221628
2356	9.6	2.0	0.7	chr1	151629587	151629878	(97326544)	C	AluSx3	SINE/Alu	(15)	296	1	221629
787	27.4	5.0	0.4	chr1	157333292	157333540	(91622882)	C	MIR	SINE/MIR	(0)	262	2	231574
263	37.1	3.2	5.2	chr1	157333541	157333563	(91622859)	+	L2	LINE/L2	1440	1461	(1958)	231571
1286	21.6	1.6	15.1	chr1	157333564	157333994	(91622428)	+	MLT1A	LTR/ERVL-MaLR	3	374	(0)	231575
7770	17.0	6.7	0.3	chr1	159374116	159375656	(89580766)	+	L1M4c	LINE/L1	29	2173	(4247)	234255
11816	18.0	1.3	4.6	chr1	162476604	162477032	(86479390)	+	L1MA3	LINE/L1	2178	2580	(4985)	239197
2425	24.6	10.6	3.1	chr1	166490481	166491415	(82465007)	C	L2a	LINE/L2	(660)	2759	1747	245349
879	29.0	9.1	1.6	chr1	167821282	167821656	(81134766)	+	LTR79	LTR/ERVL	6	411	(116)	247369
3423	9.0	2.1	3.0	chr1	168402355	168402845	(80553577)	C	LTR15	LTR/ERV1	(7)	486	1	248348
18696	16.1	3.0	0.5	chr1	187152263	187155267	(61801155)	C	L1MA1	LINE/L1	(4138)	3427	343	276610
696	19.4	4.0	0.0	chr1	204506878	204507021	(44449401)	+	L1MA8	LINE/L1	6142	6291	(0)	301658
11935	8.7	3.0	0.6	chr1	210324856	210325729	(38630693)	C	L1M1	LINE/L1	(4836)	2729	1830	310977
2814	14.8	1.8	5.9	chr1	224047499	224048361	(24908061)	+	L1MC1	LINE/L1	5375	6328	(5)	331674
4400	23.4	10.7	5.9	chr1	230533536	230534574	(18421848)	+	L1MEg	LINE/L1	2	1081	(5003)	342026
11801	18.7	4.1	1.2	chr1	233561428	233565368	(15391054)	+	L1MA5	LINE/L1	2076	6141	(1421)	346592
4509	13.8	1.3	1.7	chr1	233665264	233665973	(15290449)	C	LTR62	LTR/ERVL	(2)	707	1	346733
928	16.7	0.0	2.5	chr1	234373076	234373237	(14583185)	+	AluJr	SINE/Alu	145	302	(10)	347762
14	11.0	0.0	6.1	chr1	241600301	241600333	(7356089)	+	(TCTT)n	Simple_repeat	1	33	(0)	359530
387	30.6	14.8	2.2	chr1	244366904	244367480	(4588942)	C	L2c	LINE/L2	(113)	3274	2604	364074
3987	7.7	2.4	0.2	chr10	4866728	4867249	(128930173)	C	LTR8	LTR/ERV1	(157)	534	1	377027
1475	26.2	9.0	0.7	chr10	4867250	4867706	(128929716)	C	L1MD2	LINE/L1	(139)	6220	5722	377029
482	26.6	8.8	0.5	chr10	5479227	5479434	(128317988)	C	MER113	DNA/hAT-Charlie	(73)	448	222	377813
3434	15.2	1.2	0.5	chr10	9825470	9826030	(123971392)	+	MER61E	LTR/ERV1	1	565	(4)	384785
4241	21.6	9.3	4.5	chr10	12009507	12010989	(121786433)	+	L1MEc	LINE/L1	87	1648	(4752)	387945
472	25.5	10.1	2.4	chr10	16891767	16891931	(116905491)	+	MER20	DNA/hAT-Charlie	1	179	(40)	396533
247	26.8	4.9	0.0	chr10	29117825	29117921	(104679501)	C	L1MEg	LINE/L1	(4485)	1740	1639	416335
745	22.9	1.5	0.5	chr10	29117917	29118154	(104679268)	C	L1MEg	LINE/L1	(5108)	1117	871	416335
808	13.8	0.0	0.8	chr10	34985145	34985275	(98812147)	+	MER3	DNA/hAT-Charlie	80	209	(0)	425729
351	13.8	1.7	0.0	chr10	34985233	34985290	(98812132)	C	MER3	DNA/hAT-Charlie	(119)	90	32	425730
477	18.2	2.3	0.1	chr10	34985306	34985451	(98811971)	C	L1MEg	LINE/L1	(6009)	1094	943	425728
1866	21.6	14.2	7.8	chr10	34985462	34985510	(98811912)	+	LTR41	LTR/ERVL	1	48	(720)	425731
5540	21.1	9.0	4.0	chr10	35438612	35440349	(98357073)	C	L1MDa	LINE/L1	(4409)	2224	146	426592
589	21.8	5.3	2.1	chr10	43384196	43384340	(90413082)	C	MER58A	DNA/hAT-Charlie	(0)	224	75	433395
1620	20.4	0.0	0.0	chr10	43384359	43384632	(90412790)	+	AluJb	SINE/Alu	1	274	(38)	433396
2012	11.3	2.6	2.6	chr10	46004319	46004620	(87792802)	C	AluSx1	SINE/Alu	(10)	302	1	437010
265	6.2	0.0	0.0	chr10	46030916	46030947	(87766475)	+	L1MB7	LINE/L1	5888	5919	(265)	437046
2275	8.4	1.3	0.3	chr10	46030986	46031283	(87766139)	+	AluSc8	SINE/Alu	1	301	(10)	437047
253	18.9	3.9	8.6	chr10	49086984	49087064	(84710358)	C	L1MEg	LINE/L1	(4365)	1719	1643	441421
1722	25.2	12.4	2.9	chr10	49087061	49087727	(84709695)	C	L1MEg	LINE/L1	(5122)	962	223	441421
2270	29.6	9.0	6.7	chr10	49433185	49433536	(84363886)	+	L1MEd	LINE/L1	961	1314	(5789)	441880
1103	29.4	8.5	1.6	chr10	50324676	50325280	(83472142)	+	L1MC5a	LINE/L1	2116	2765	(12)	443190
490	21.8	1.7	14.3	chr10	61823219	61823370	(71974052)	C	Arthur1A	DNA/hAT-Tip100	(0)	177	46	459100
6631	18.6	4.3	2.8	chr10	67587360	67588599	(66208823)	C	L1PA3	LINE/L1	(4241)	3325	2058	467639
29	10.2	9.1	2.4	chr10	71896664	71896740	(61900682)	+	(TTCTAT)n	Simple_repeat	1	84	(0)	476136
722	20.4	0.0	2.2	chr10	71896749	71896885	(61900537)	C	AluJo	SINE/Alu	(178)	134	1	476137
901	20.9	8.7	1.4	chr10	72116433	72116781	(61680641)	C	L1MEg	LINE/L1	(4969)	1256	882	476552
199	23.2	25.2	1.0	chr10	72277007	72277102	(61520320)	C	MER5A	DNA/hAT-Charlie	(0)	189	63	476926
193	25.0	7.3	2.6	chr10	72277085	72277162	(61520260)	+	L2	LINE/L2	65	146	(3273)	476927
295	25.5	4.7	5.6	chr10	72277272	72277379	(61520043)	C	MIRc	SINE/MIR	(44)	224	118	476928
13	14.4	2.2	8.5	chr10	74056921	74056950	(59740472)	+	(TAT)n	Simple_repeat	1	29	(0)	480492
1857	18.1	0.7	2.0	chr10	74056951	74057243	(59740179)	C	AluJr4	SINE/Alu	(22)	290	2	480493
820	26.6	10.7	2.8	chr10	80496377	80497021	(53300401)	C	L1MEc	LINE/L1	(4897)	1503	802	491314
1988	11.8	0.0	0.0	chr10	84525091	84525370	(49272052)	+	MER61E	LTR/ERV1	1	280	(289)	496993
6224	6.8	3.2	0.5	chr10	84525371	84526129	(49271293)	C	LTR17	LTR/ERV1	(0)	780	1	496994
964	26.6	2.8	7.0	chr10	97798560	97799016	(35998406)	C	L1MEd	LINE/L1	(5902)	1184	748	518765
912	21.1	1.8	0.0	chr10	97799102	97799324	(35998098)	+	L1MEd	LINE/L1	958	1184	(5902)	518766
4916	15.8	2.5	2.1	chr10	109861958	109862815	(23934607)	+	L1M4c	LINE/L1	14	875	(5509)	538512
5418	13.8	3.1	1.2	chr10	109862798	109863743	(23933679)	+	L1M4c	LINE/L1	977	1941	(4443)	538512
2366	27.3	4.5	2.2	chr11	2630481	2631686	(132454936)	C	L1MA9	LINE/L1	(4162)	3404	2096	576002
2771	20.5	5.7	4.9	chr11	4140129	4140913	(130945709)	C	L1MB4	LINE/L1	(5780)	1737	950	578434
2404	7.1	0.0	0.7	chr11	5244137	5244467	(129842155)	C	AluY	SINE/Alu	(0)	311	1	579776
15569	11.3	1.1	2.2	chr11	5263383	5266802	(129819820)	+	L1MA4A	LINE/L1	2922	6295	(8)	579798
9104	16.6	7.4	2.6	chr11	5922392	5924951	(129161671)	+	L1M1	LINE/L1	27	2713	(4852)	580640
4502	27.9	5.8	6.5	chr11	12489179	12489935	(122596687)	+	L1MEd	LINE/L1	819	1552	(5551)	590854
1775	15.4	0.3	6.6	chr11	12857804	12858121	(122228501)	+	AluJb	SINE/Alu	1	298	(14)	591422
231	35.3	1.4	2.2	chr11	17187068	17187206	(117899416)	C	L2	LINE/L2	(1037)	2382	2245	598236
1059	13.1	1.2	0.0	chr11	17187365	17187532	(117899090)	C	L1MB7	LINE/L1	(2)	6182	6013	598237
4021	25.6	8.0	4.8	chr11	31542013	31543314	(103543308)	+	L1MEc	LINE/L1	46	1387	(5013)	620124
9674	19.2	4.2	1.7	chr11	36280943	36282702	(98803920)	+	L1MD1	LINE/L1	1	2062	(4571)	628174
2317	28.4	7.7	7.2	chr11	43952820	43953061	(91133561)	+	MLT1J2-int	LTR/ERVL-MaLR	920	1141	(246)	639257
4178	11.0	3.5	1.6	chr11	43953062	43953233	(91133389)	+	MER41B	LTR/ERV1	1	169	(465)	639261
2287	9.8	0.3	2.9	chr11	43953234	43953540	(91133082)	+	AluSg4	SINE/Alu	2	300	(10)	639262
296	32.0	13.9	2.7	chr11	59545915	59546086	(75540536)	C	L2	LINE/L2	(768)	2651	2455	656932
1055	19.3	4.0	8.7	chr11	59546097	59546385	(75540237)	+	MLT1C	LTR/ERVL-MaLR	2	276	(191)	656934
1472	12.7	5.6	0.8	chr11	61963770	61964006	(73122616)	+	AluSx3	SINE/Alu	49	297	(14)	661184
1230	9.2	0.0	0.6	chr11	62670952	62671114	(72415508)	+	AluJb	SINE/Alu	136	297	(15)	662538
13	22.2	4.8	0.0	chr11	62671130	62671171	(72415451)	+	(AAC)n	Simple_repeat	1	44	(0)	662539
865	23.3	16.6	1.6	chr11	62889665	62890031	(72196591)	C	MER77B	LTR/ERVL	(23)	677	245	663049
446	22.2	7.5	0.0	chr11	62890123	62890221	(72196401)	C	MER77B	LTR/ERVL	(593)	107	1	663049
359	24.0	20.5	1.2	chr11	62890234	62890406	(72196216)	C	L2a	LINE/L2	(549)	2870	2656	663048
13	14.3	2.2	8.5	chr11	65423133	65423178	(69663444)	+	GA-rich	Low_complexity	1	47	(0)	667512
1937	13.4	1.3	1.0	chr11	65506779	65507076	(69579546)	C	AluSx3	SINE/Alu	(12)	299	1	667666
2443	8.5	1.0	0.0	chr11	65507915	65508220	(69578402)	+	AluSp	SINE/Alu	1	309	(4)	667667
2198	9.0	1.0	0.3	chr11	68459681	68459969	(66626653)	+	AluSq2	SINE/Alu	1	291	(22)	673465
488	16.4	0.0	0.0	chr11	68460147	68460219	(66626403)	C	tRNA-Ala-GCY	tRNA	(2)	74	2	673466
7394	19.6	5.7	5.0	chr11	73009569	73011968	(62074654)	C	L1M2	LINE/L1	(4261)	2588	2	681017
6442	6.8	0.1	0.1	chr11	74115515	74116774	(60969848)	+	L1PB1	LINE/L1	4531	5791	(360)	683456
195	27.2	0.0	0.0	chr11	74116781	74117239	(60969383)	+	(TA)n	Simple_repeat	1	459	(0)	683457
8784	18.4	5.5	4.3	chr11	74537667	74537958	(60548664)	C	L1M4b	LINE/L1	(5002)	1865	1566	684284
2424	12.2	11.1	3.0	chr11	74537959	74538389	(60548233)	C	LTR7Y	LTR/ERV1	(2)	470	1	684287
2539	16.9	1.3	7.2	chr11	75516879	75517176	(59569446)	+	LTR32	LTR/ERVL	1	291	(166)	686241
2269	12.0	0.3	0.0	chr11	75517177	75517484	(59569138)	+	AluSp	SINE/Alu	5	313	(0)	686242
4284	21.0	5.1	3.1	chr11	78406666	78407349	(56679273)	+	L1MD1	LINE/L1	1055	1873	(4867)	691971
1448	22.4	11.1	6.1	chr11	97963447	97964133	(37122489)	C	MER61E	LTR/ERV1	(2)	777	1	721865
1432	23.5	7.1	7.4	chr11	97973243	97973850	(37112772)	C	MER61E	LTR/ERV1	(29)	616	7	721869
13	26.6	0.0	5.1	chr11	118126705	118126763	(16959859)	+	(TACCAAG)n	Simple_repeat	1	59	(0)	752372
305	30.4	16.8	0.8	chr11	118415467	118415711	(16670911)	+	L2c	LINE/L2	3040	3331	(56)	752857
652	28.3	4.6	5.2	chr11	124429371	124429810	(10656812)	+	L1MEd	LINE/L1	618	1054	(6032)	763024
30	0.0	0.0	0.0	chr11	124429884	124429909	(10656713)	+	(TG)n	Simple_repeat	1	26	(0)	763025
1620	23.1	7.2	2.1	chr11	129768917	129769494	(5317128)	+	L1MEc	LINE/L1	751	1360	(5040)	770779
541	3.2	0.0	0.0	chr12	6943817	6943878	(126331431)	+	U7	snRNA	2	63	(0)	789678
12651	14.9	3.2	2.2	chr12	10083773	10084185	(123191124)	+	L1PBa	LINE/L1	1854	2271	(4592)	794701
897	37.4	0.1	0.4	chr12	39711536	39714406	(93560903)	+	(TA)n	Simple_repeat	2	2868	(0)	832795
15	4.5	0.0	4.0	chr12	47775481	47775505	(85499804)	+	(TGG)n	Simple_repeat	1	25	(0)	844185
186	37.0	2.9	1.3	chr12	53147082	53147951	(80127358)	+	(ATATAC)n	Simple_repeat	1	895	(0)	854151
38	0.0	0.0	0.0	chr12	53147958	53147990	(80127319)	+	(TG)n	Simple_repeat	1	33	(0)	854152
892	12.0	0.0	0.8	chr12	53147998	53148122	(80127187)	C	AluJb	SINE/Alu	(187)	125	2	854153
17	7.5	6.2	5.9	chr12	64451496	64451543	(68823766)	+	(TAAGTTT)n	Simple_repeat	1	51	(0)	871146
4973	11.7	2.5	2.3	chr12	65642858	65643697	(67631612)	C	L1MA8	LINE/L1	(6)	6285	5444	873104
269	21.8	28.4	2.5	chr12	65643840	65643999	(67631310)	+	MamGypLTR1d	LTR/Gypsy	1	218	(595)	873105
1926	15.5	0.9	2.6	chr12	73057539	73057883	(60217426)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	884555
251	28.4	4.7	1.9	chr12	94023842	94023945	(39251364)	+	L2c	LINE/L2	3212	3318	(69)	914519
2316	28.9	8.3	5.2	chr12	94024006	94025062	(39250247)	C	L1MEd	LINE/L1	(5990)	1096	4	914520
256	15.5	4.9	3.3	chr12	94792142	94792201	(38483108)	C	LTR57-int	LTR/ERVL	(4401)	942	882	915842
2023	26.3	11.0	4.1	chr12	96336670	96337521	(36937788)	C	L1MEg	LINE/L1	(5165)	919	2	918870
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
5323	21.1	10.8	9.5	chr12	120795246	120796093	(12479216)	C	L1MEc	LINE/L1	(4041)	1897	1009	967874
4197	13.9	2.4	1.9	chr12	131362184	131362814	(1912495)	C	MER41B	LTR/ERV1	(0)	634	1	988030
2023	29.7	4.3	5.0	chr12	131362815	131362842	(1912467)	+	L1MC5a	LINE/L1	2448	2472	(305)	988027
2089	15.9	3.3	0.3	chr12	131362843	131363196	(1912113)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	988031
1718	16.7	0.9	0.6	chr13	27138393	27138711	(87225617)	C	LTR47A2	LTR/ERVL	(112)	320	1	1004378
234	26.8	2.3	4.4	chr13	27138748	27138837	(87225491)	C	X7A_LINE	LINE/CR1	(164)	103	16	1004380
2078	22.8	5.6	7.6	chr13	64274384	64275072	(50089256)	+	MER61E	LTR/ERV1	1	776	(3)	1058319
8134	18.8	6.3	1.8	chr13	71052881	71056193	(43308135)	C	L1MA4A	LINE/L1	(2914)	4291	706	1066964
1874	20.2	6.7	0.9	chr13	80737302	80737720	(33626608)	+	L1MA8	LINE/L1	5	449	(6581)	1080666
2089	26.1	9.1	4.3	chr13	80816605	80819114	(33545214)	+	L1MEc	LINE/L1	704	3367	(2952)	1080776
3104	24.3	7.8	2.2	chr13	80853357	80855228	(33509100)	C	L1MC1	LINE/L1	(4612)	2139	674	1080809
4332	10.5	1.9	0.9	chr13	89806519	89807155	(24557173)	+	L1PA10	LINE/L1	5526	6168	(0)	1092112
350	35.3	9.5	4.9	chr13	89867192	89867474	(24496854)	+	L2a	LINE/L2	2043	2346	(1073)	1092198
1134	29.5	5.7	2.0	chr13	89901892	89902548	(24461780)	C	L1MCc	LINE/L1	(1451)	5490	4808	1092249
689	18.9	1.2	1.7	chr13	89902549	89902720	(24461608)	C	L1MC3	LINE/L1	(8)	7777	7607	1092250
417	27.2	15.3	4.9	chr13	89902729	89903238	(24461090)	C	L1MCc	LINE/L1	(2472)	4469	3897	1092249
5079	20.9	1.8	1.6	chr13	90030552	90032275	(24332053)	+	L1MB1	LINE/L1	4275	6023	(145)	1092421
13188	19.5	3.4	1.2	chr13	90538064	90542827	(23821501)	+	L1PA15	LINE/L1	956	5845	(828)	1093050
834	18.7	2.8	13.4	chr13	90568040	90568323	(23796005)	C	L1MA9	LINE/L1	(1)	6311	6059	1093079
1726	21.0	11.1	1.6	chr13	90568377	90568874	(23795454)	C	L1MD	LINE/L1	(1221)	4925	4375	1093080
4538	10.3	1.1	0.0	chr13	90584364	90584992	(23779336)	C	THE1A-int	LTR/ERVL-MaLR	(9)	1571	936	1093101
183	25.5	3.5	1.8	chr13	90741986	90742041	(23622287)	C	MIR3	SINE/MIR	(67)	141	85	1093316
17	8.4	0.0	3.7	chr13	90924634	90924660	(23439668)	+	(GT)n	Simple_repeat	1	27	(0)	1093545
3845	24.6	14.6	3.7	chr13	91097709	91099245	(23265083)	C	Charlie2a	DNA/hAT-Charlie	(1106)	1755	2	1093777
2410	12.6	2.4	0.0	chr13	91580830	91581194	(22783134)	C	THE1C	LTR/ERVL-MaLR	(0)	375	2	1094452
99	38.4	0.6	0.0	chr13	91674378	91674722	(22689606)	+	(TA)n	Simple_repeat	1	347	(0)	1094589
7949	8.9	1.6	0.3	chr13	92496981	92498123	(21866205)	C	L1P3	LINE/L1	(869)	5277	4120	1095655
203	31.1	13.6	4.5	chr13	92659783	92659981	(21704347)	C	L2b	LINE/L2	(219)	3156	2937	1095884
1665	13.8	8.9	1.7	chr13	92694833	92695185	(21669143)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1095918
1301	10.1	8.1	0.0	chr13	92695186	92695344	(21668984)	C	L1PA16	LINE/L1	(751)	5395	5223	1095916
6398	17.1	1.3	1.1	chr13	93199901	93201026	(21163302)	+	L1PB4	LINE/L1	5017	6154	(2)	1096573
11208	10.4	4.8	1.5	chr13	110962667	110963654	(3400674)	+	MER41-int	LTR/ERV1	4951	5944	(2)	1121988
3830	12.7	0.2	1.4	chr13	110963655	110964213	(3400115)	+	MER41A	LTR/ERV1	1	552	(2)	1121988
3372	24.1	3.9	2.7	chr14	54823528	54824883	(52218835)	+	L1M4c	LINE/L1	2007	3337	(4228)	1176501
4404	11.3	1.9	0.2	chr14	64363425	64364047	(42679671)	+	MER41B	LTR/ERV1	1	634	(0)	1191135
1383	20.8	12.7	0.9	chr14	71642810	71643246	(35400472)	+	L1MEc	LINE/L1	992	1487	(4913)	1203141
9401	15.3	3.8	2.3	chr14	76740448	76741510	(30302208)	C	L1MA4A	LINE/L1	(4037)	3529	2481	1212874
2535	8.1	0.3	0.0	chr14	90749397	90749704	(16294014)	C	AluSp	SINE/Alu	(4)	309	1	1234392
2602	15.5	8.7	2.4	chr14	90749705	90749936	(16293782)	C	L1MEc	LINE/L1	(5212)	1188	949	1234387
3003	27.4	9.8	6.6	chr14	93664245	93666056	(13377662)	+	L1MEd	LINE/L1	20	1832	(5271)	1239814
3817	11.5	0.9	1.1	chr14	103427526	103428035	(3615683)	C	MER41B	LTR/ERV1	(129)	505	2	1256813
1061	14.5	4.6	0.6	chr14	103428036	103428202	(3615516)	C	MER41-int	LTR/ERV1	(0)	5946	5773	1256813
503	23.3	5.8	3.6	chr14	105140105	105140360	(1903358)	C	L1MEd	LINE/L1	(5127)	1098	821	1259330
3155	23.5	2.4	4.8	chr15	27734810	27735965	(74255224)	+	L1M1	LINE/L1	2019	3066	(4499)	1273000
1814	28.8	5.3	8.4	chr15	41061647	41061913	(60929276)	+	L1MEg	LINE/L1	864	1118	(5124)	1292414
410	24.4	4.0	0.8	chr15	41061909	41062028	(60929161)	C	L1MEg	LINE/L1	(4886)	1198	1075	1292418
9720	14.1	10.5	9.9	chr15	42750110	42751394	(59239795)	+	L1M4c	LINE/L1	761	2178	(4206)	1295683
1318	15.4	1.7	0.9	chr15	44727256	44727484	(57263705)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	6	1299467
1741	28.5	10.8	9.5	chr15	48705277	48706197	(53284992)	+	L1MEd	LINE/L1	724	1603	(5500)	1305199
7070	20.5	3.4	4.0	chr15	51482794	51485330	(50505859)	+	L1M2c	LINE/L1	2	2270	(4519)	1309589
3838	12.3	6.5	0.3	chr15	56784224	56784817	(45206372)	+	MER41B	LTR/ERV1	1	633	(1)	1317607
2542	28.4	11.2	3.6	chr15	56946099	56946798	(45044391)	C	L1MEc	LINE/L1	(4990)	1410	666	1317902
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
1765	10.2	0.0	0.0	chr15	66623635	66623860	(35367329)	+	AluSx3	SINE/Alu	82	307	(4)	1335107
4640	12.0	0.0	0.3	chr15	66624022	66624655	(35366534)	+	MER41B	LTR/ERV1	3	634	(0)	1335108
4896	27.2	6.0	4.1	chr15	69923575	69925775	(32065414)	C	L1MEd	LINE/L1	(3862)	2284	21	1341165
7888	18.6	5.0	2.2	chr15	81992232	81995163	(19996026)	+	L1M1	LINE/L1	1899	4918	(2644)	1362156
3280	13.7	2.6	0.6	chr15	90648416	90648950	(11342239)	+	MER41B	LTR/ERV1	2	547	(87)	1376776
622	27.7	6.0	0.4	chr16	1059489	1059712	(89278633)	C	L1MEd	LINE/L1	(6033)	1053	817	1395459
3956	11.1	0.6	1.6	chr16	10325688	10326111	(80012234)	C	MER41A	LTR/ERV1	(134)	420	1	1413221
239	27.7	2.1	10.5	chr16	10326112	10326148	(80012197)	C	MER21A	LTR/ERVL	(708)	223	188	1413223
3911	14.2	2.0	8.5	chr16	10326149	10326888	(80011457)	C	LTR8	LTR/ERV1	(0)	691	1	1413224
1834	16.6	0.0	2.3	chr16	12744700	12745006	(77593339)	+	AluJb	SINE/Alu	2	301	(11)	1418532
2928	24.9	8.4	3.7	chr16	12745007	12745297	(77593048)	+	L1MEc	LINE/L1	1092	1405	(4995)	1418531
30	0.0	0.0	0.0	chr16	20944777	20944802	(69393543)	+	(AC)n	Simple_repeat	1	26	(0)	1436771
370	26.2	8.0	1.9	chr16	20944924	20944973	(69393372)	+	MIRb	SINE/MIR	35	84	(184)	1436772
4413	10.9	1.7	0.9	chr16	20944974	20945480	(69392865)	+	MER41B	LTR/ERV1	1	504	(130)	1436773
2690	13.0	16.3	3.9	chr16	23596928	23597462	(66740883)	C	LTR18B	LTR/ERVL	(0)	614	1	1442650
330	21.3	13.9	11.0	chr16	23597463	23597585	(66740760)	+	HAL1b	LINE/L1	1844	1991	(430)	1442649
1941	26.7	12.4	4.3	chr16	24961991	24962983	(65375362)	+	L1MEd	LINE/L1	3	1087	(5999)	1445908
2823	22.1	7.7	2.0	chr16	27422027	27422938	(62915407)	C	L1MB7	LINE/L1	(4677)	2656	1735	1451102
8612	17.6	7.9	2.2	chr16	46585271	46587567	(43750778)	+	L1MD1	LINE/L1	15	2684	(3853)	1465647
3900	11.0	2.3	1.4	chr16	65768863	65769426	(24568919)	C	MER61E	LTR/ERV1	(0)	569	1	1498482
16	8.1	0.0	0.0	chr16	74607524	74607549	(15730796)	+	(TCCT)n	Simple_repeat	1	26	(0)	1515039
16	25.7	1.7	3.3	chr16	79869155	79869214	(10469131)	+	A-rich	Low_complexity	1	61	(0)	1524309
3800	9.6	3.8	0.8	chr17	4002318	4002679	(79254762)	C	MER41A	LTR/ERV1	(186)	368	2	1552174
2188	5.5	4.8	3.5	chr17	7378917	7379205	(75878236)	C	AluY	SINE/Alu	(18)	293	1	1558741
1246	25.9	4.8	3.0	chr17	7379248	7379713	(75877728)	+	L1MEd	LINE/L1	956	1430	(5656)	1558742
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
1979	1.4	0.0	0.0	chr17	19112420	19112636	(64144805)	C	U3	snRNA	(0)	217	1	1579881
730	25.2	10.4	0.8	chr17	20306829	20307192	(62950249)	+	L1MEd	LINE/L1	699	1101	(5985)	1582299
438	28.0	12.4	9.1	chr17	20307203	20307575	(62949866)	C	MLT1J	LTR/ERVL-MaLR	(18)	494	108	1582301
1127	32.2	7.8	2.6	chr17	29033873	29034898	(54222543)	+	L1MEg	LINE/L1	49	1292	(4933)	1589809
386	28.2	9.2	7.3	chr17	33908254	33908498	(49348943)	+	MLT1O	LTR/ERVL-MaLR	147	396	(146)	1599543
13	18.8	0.0	5.0	chr17	40819392	40819431	(42438010)	+	(TCTCTCC)n	Simple_repeat	1	40	(0)	1612708
857	19.9	8.6	0.0	chr17	41678325	41678495	(41578946)	+	LTR27D	LTR/ERV1	287	473	(142)	1614027
710	16.9	6.8	3.8	chr17	41678503	41678687	(41578754)	+	MER31B	LTR/ERV1	274	464	(2)	1614028
434	30.2	8.0	4.7	chr17	42535586	42536003	(40721438)	+	L2c	LINE/L2	2938	3387	(0)	1615843
253	28.1	3.0	0.0	chr17	44503775	44503838	(38753603)	+	MIR	SINE/MIR	2	67	(195)	1620073
247	29.6	12.6	0.0	chr17	44503842	44503973	(38753468)	C	L2a	LINE/L2	(61)	3365	3215	1620074
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
1578	18.6	4.9	0.4	chr17	58631185	58631459	(24625982)	+	AluSz6	SINE/Alu	6	293	(19)	1645372
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
2086	30.1	6.5	6.4	chr17	77009798	77010401	(6247040)	+	L1MEd	LINE/L1	760	1352	(5734)	1679230
3513	11.8	7.8	0.9	chr17	78272043	78272566	(4984875)	C	LTR6A	LTR/ERV1	(1)	563	1	1681538
4176	10.1	8.1	0.0	chr17	82344952	82345557	(911884)	+	PABL_A	LTR/ERV1	1	659	(1)	1687515
483	22.3	22.1	0.2	chr17	82945072	82945332	(312109)	+	L1ME3B	LINE/L1	888	1196	(5046)	1688414
213	24.4	9.5	9.5	chr18	3605664	3605758	(76767527)	+	MIR3	SINE/MIR	100	194	(14)	1694736
2753	12.8	9.5	2.2	chr18	9016734	9016919	(71356366)	C	LTR64	LTR/ERV1	(338)	190	2	1702275
1486	14.1	0.0	3.0	chr18	9803225	9803458	(70569827)	C	AluJo	SINE/Alu	(1)	311	85	1703691
21	28.8	3.6	0.0	chr18	23487866	23487949	(56885336)	+	A-rich	Low_complexity	1	87	(0)	1716302
23365	12.3	2.6	1.0	chr18	25884163	25887664	(54485621)	+	L1M1	LINE/L1	14	3575	(3990)	1719960
1655	25.1	5.6	2.4	chr18	48497777	48498161	(31875124)	+	L1MCa	LINE/L1	1340	1800	(5328)	1752021
29	0.0	3.2	0.0	chr18	48498162	48498192	(31875093)	+	(CAA)n	Simple_repeat	1	32	(0)	1752022
1655	28.5	12.6	5.6	chr18	48498193	48499243	(31874042)	+	L1MCa	LINE/L1	1801	2976	(4152)	1752021
11	32.1	0.0	3.3	chr19	12946211	12946271	(45671345)	+	(GCCCCG)n	Simple_repeat	1	61	(0)	1825595
391	32.1	10.7	0.1	chr19	12946493	12946708	(45670908)	C	MIRb	SINE/MIR	(16)	252	8	1825596
181	32.4	4.3	1.8	chr19	18224033	18224145	(40393471)	+	L2c	LINE/L2	3005	3120	(267)	1838407
588	31.3	6.9	7.6	chr19	18390227	18390593	(40227023)	C	L2b	LINE/L2	(19)	3356	2993	1838796
2582	14.6	0.0	1.3	chr19	28606839	28607227	(30010389)	+	HERVE-int	LTR/ERV1	1	384	(7463)	1849048
357	25.0	6.0	4.1	chr19	28607296	28607441	(30010175)	+	HERVE-int	LTR/ERV1	312	460	(7143)	1849048
33644	14.7	1.4	1.7	chr19	28607468	28613524	(30004092)	+	HERVE-int	LTR/ERV1	512	6548	(1265)	1849048
3731	26.3	6.6	8.1	chr19	33991003	33993359	(24624257)	+	L1MEf	LINE/L1	377	2516	(3630)	1857667
2074	11.7	0.0	0.7	chr19	40489387	40489685	(18127931)	C	AluSz	SINE/Alu	(13)	299	3	1871222
17	8.8	0.0	0.0	chr19	46549507	46549530	(12068086)	+	(GA)n	Simple_repeat	1	24	(0)	1883977
1496	27.5	10.1	3.9	chr19	46549581	46549727	(12067889)	C	L1MEg	LINE/L1	(5110)	2223	2096	1883978
3882	11.1	1.9	7.8	chr19	46549728	46550225	(12067391)	C	L1PB4	LINE/L1	(2)	6154	5681	1883979
1487	9.0	1.0	1.0	chr19	48254471	48254670	(10362946)	+	AluSx3	SINE/Alu	1	200	(111)	1888294
2155	15.2	6.5	3.7	chr19	48254703	48255085	(10362531)	+	MER65A	LTR/ERV1	3	406	(39)	1888295
7899	7.5	1.4	0.3	chr19	48876222	48877217	(9740399)	C	LTR13	LTR/ERVK	(0)	1007	1	1889840
775	14.5	0.0	3.1	chr19	48967917	48968044	(9649572)	+	FLAM_C	SINE/Alu	5	128	(5)	1890083
1759	29.8	4.9	2.9	chr2	10515854	10516443	(231677086)	C	L1ME3A	LINE/L1	(5794)	1309	707	1924895
4445	22.2	9.3	2.1	chr2	29469754	29471058	(212722471)	+	L1ME3	LINE/L1	582	1989	(4253)	1955366
4212	8.2	0.6	1.6	chr2	39468180	39468739	(202724790)	+	MER41A	LTR/ERV1	1	554	(0)	1971259
9656	18.6	7.8	2.9	chr2	44735942	44737124	(197456405)	C	L1MEc	LINE/L1	(4354)	2046	757	1979678
2340	25.1	7.1	3.3	chr2	46926572	46927355	(195266174)	+	L1MEg	LINE/L1	596	1401	(4841)	1983074
1695	26.8	8.7	2.9	chr2	48310416	48311391	(193882138)	C	L1MEg	LINE/L1	(4734)	1508	433	1985732
136	31.3	1.4	0.0	chr2	61387483	61387928	(180805601)	+	(TA)n	Simple_repeat	1	452	(0)	2004212
19280	13.9	2.6	1.3	chr2	64350882	64353807	(177839722)	+	L1M1	LINE/L1	13	2993	(4572)	2009221
358	34.2	14.0	1.5	chr2	68438844	68439208	(173754321)	C	L2a	LINE/L2	(313)	3113	2701	2015613
13204	15.7	4.0	1.7	chr2	68941108	68944555	(173248974)	C	L1PA16	LINE/L1	(2684)	3799	264	2016282
7215	20.2	7.1	6.7	chr2	70651093	70652937	(171540592)	C	L1MEc	LINE/L1	(4496)	1985	131	2019414
421	22.6	8.2	1.0	chr2	88016105	88016206	(154177323)	C	AluJo	SINE/Alu	(195)	117	8	2045131
923	20.9	0.0	1.6	chr2	88016358	88016547	(154176982)	C	U2	snRNA	(1)	187	1	2045132
2429	28.3	8.9	3.4	chr2	96517011	96517840	(145675689)	+	L1MEd	LINE/L1	857	1737	(5434)	2052273
21888	13.9	1.6	6.1	chr2	108707159	108707708	(133485821)	+	L1M1	LINE/L1	2049	2590	(4975)	2069665
5185	19.7	5.1	9.4	chr2	112045320	112046919	(130146610)	C	L1MEc	LINE/L1	(4833)	1567	35	2074460
1959	12.2	1.0	4.3	chr2	135189108	135189266	(107004263)	+	AluSx	SINE/Alu	138	295	(17)	2108591
4489	16.8	11.4	2.5	chr2	135189271	135190207	(107003322)	+	L1MB3	LINE/L1	1049	2096	(4288)	2108589
183	34.8	9.2	1.9	chr2	170710230	170710390	(71483139)	+	L2	LINE/L2	2559	2732	(687)	2157099
2031	13.2	6.2	0.0	chr2	170743488	170743760	(71449769)	C	AluJb	SINE/Alu	(17)	295	5	2157155
1798	23.8	2.9	0.7	chr2	170743778	170744187	(71449342)	C	LTR52	LTR/ERVL	(2)	419	1	2157156
13469	13.0	3.3	1.7	chr2	171651724	171653108	(70540421)	C	L1MA3	LINE/L1	(5024)	2541	453	2158807
8921	20.4	2.5	1.5	chr2	189980744	189983771	(52209758)	C	L1PA17	LINE/L1	(3219)	3696	848	2183668
140	28.4	5.4	4.6	chr2	192682022	192682681	(49510848)	+	(ATACGT)n	Simple_repeat	1	674	(0)	2187548
39	9.5	4.2	2.0	chr2	192682682	192682776	(49510753)	+	(GTATATAC)n	Simple_repeat	1	99	(0)	2187549
140	28.4	5.4	4.6	chr2	192682777	192682936	(49510593)	+	(ATACGT)n	Simple_repeat	3	152	(0)	2187550
4325	12.6	2.8	1.0	chr2	204354054	204354744	(37838785)	C	LTR62	LTR/ERVL	(5)	704	1	2205503
191	22.8	1.7	3.4	chr2	207772208	207772266	(34421263)	C	AmnSINE1	SINE/5S-Deu-L2	(215)	360	303	2210640
4667	8.7	0.3	2.9	chr2	207772280	207772811	(34420718)	+	MER41B	LTR/ERV1	1	523	(111)	2210641
16214	15.9	3.7	2.6	chr2	216232699	216234832	(25958697)	C	L1M2	LINE/L1	(4641)	2925	721	2222364
33	3.8	0.0	9.1	chr2	236459483	236459548	(5733981)	+	(ATACGT)n	Simple_repeat	1	66	(0)	2255031
391	26.9	9.0	2.8	chr2	236459549	236459576	(5733953)	+	L1ME4a	LINE/L1	5936	5963	(161)	2255030
74	4.6	8.9	0.0	chr2	236459577	236459711	(5733818)	+	(ATACGTAT)n	Simple_repeat	1	147	(0)	2255032
391	26.9	9.0	2.8	chr2	236459712	236459858	(5733671)	+	L1ME4a	LINE/L1	5964	6123	(1)	2255030
3939	12.7	5.5	0.2	chr2	237964102	237964701	(4228828)	C	MER41B	LTR/ERV1	(0)	634	1	2257155
5181	10.9	3.9	2.9	chr2	237964702	237964854	(4228675)	+	MER4D1	LTR/ERV1	750	899	(1)	2257153
1639	25.7	12.6	1.7	chr2	241586287	241586987	(606542)	+	L1MB7	LINE/L1	493	1280	(4962)	2261382
1407	30.2	7.0	3.6	chr2	241745655	241746483	(447046)	C	L1MEd	LINE/L1	(5394)	1692	834	2261659
20229	12.4	4.2	0.8	chr20	20135494	20138805	(44305362)	C	L1M1	LINE/L1	(4136)	3429	1	2295244
360	21.0	0.3	5.2	chr20	32208212	32208327	(32235840)	C	MIR3	SINE/MIR	(25)	183	78	2307886
263	20.0	1.6	0.0	chr20	32208325	32208384	(32235783)	C	L3	LINE/CR1	(1202)	2897	2837	2307887
3247	19.7	8.0	5.8	chr20	36002634	36003659	(28440508)	C	L1MEc	LINE/L1	(4893)	1507	458	2316613
4551	11.9	0.6	0.3	chr20	48139141	48139772	(16304395)	C	MER41B	LTR/ERV1	(0)	634	1	2341528
224	38.8	8.8	3.9	chr20	48139773	48139983	(16304184)	C	L2c	LINE/L2	(146)	3241	3020	2341527
4331	10.9	0.6	6.2	chr20	51338509	51339180	(13104987)	C	MER41B	LTR/ERV1	(0)	634	1	2348941
646	26.2	15.5	0.0	chr20	51339197	51339398	(13104769)	C	MIR	SINE/MIR	(11)	251	13	2348942
1648	29.7	5.1	0.7	chr20	58485936	58486684	(5957483)	+	L1ME3F	LINE/L1	575	1358	(5745)	2363006
812	24.2	5.3	2.2	chr20	62348637	62348987	(2095180)	+	L1MEd	LINE/L1	836	1207	(1005)	2368447
245	21.1	0.0	0.0	chr21	28983294	28983345	(17726638)	+	Tigger15a	DNA/TcMar-Tigger	86	137	(578)	2397542
565	26.2	21.0	9.2	chr21	32340632	32341267	(14368716)	+	L1ME3Cz	LINE/L1	301	996	(1)	2403040
2778	16.1	7.5	1.4	chr21	33361833	33362144	(13347839)	+	MER21B	LTR/ERVL	332	672	(196)	2404792
4120	12.7	2.5	0.0	chr21	33362145	33362773	(13347210)	C	LTR9D	LTR/ERV1	(0)	645	1	2404793
17	12.7	0.0	0.0	chr21	34888500	34888525	(11821458)	+	(A)n	Simple_repeat	1	26	(0)	2407308
578	17.7	2.0	0.0	chr21	37510031	37510126	(9199857)	+	Tigger7	DNA/TcMar-Tigger	2394	2491	(0)	2411701
511	21.0	2.5	0.8	chr21	37510127	37510246	(9199737)	C	L1ME4b	LINE/L1	(456)	436	315	2411702
2798	22.5	6.3	5.0	chr21	38097671	38099300	(8610683)	C	L1MCa	LINE/L1	(5044)	1707	1	2412573
1563	20.1	1.0	0.7	chr21	39317771	39318058	(7391925)	+	AluJo	SINE/Alu	3	291	(21)	2414343
234	23.8	9.0	11.4	chr21	39318059	39318097	(7391886)	C	MIRb	SINE/MIR	(136)	132	98	2414342
1730	30.8	6.8	6.3	chr21	41578102	41579179	(5130804)	C	L1MEg	LINE/L1	(5000)	1084	1	2417678
1845	23.8	4.1	1.9	chr21	42576427	42577052	(4132931)	+	L1MEd	LINE/L1	643	1282	(5821)	2419049
1825	24.7	7.0	2.9	chr21	44822013	44822674	(1887309)	+	L1MEg	LINE/L1	237	927	(5157)	2422196
1618	11.8	11.9	0.4	chr21	44822682	44822918	(1887065)	+	AluSx1	SINE/Alu	24	291	(21)	2422197
3892	23.6	8.2	7.0	chr21	45215613	45218470	(1491513)	C	L1MEc	LINE/L1	(2121)	4048	1019	2422644
931	22.3	3.3	4.4	chr21	45243554	45243891	(1466092)	C	L1MEd	LINE/L1	(5795)	1291	958	2422675
5371	21.5	8.2	1.7	chr22	16813965	16815477	(34002991)	C	L1MB7	LINE/L1	(906)	5240	3621	2427852
2323	11.2	0.0	0.0	chr22	19119455	19119757	(31698711)	+	AluSx	SINE/Alu	2	304	(8)	2431477
4172	21.0	7.2	4.0	chr22	19211795	19212279	(31606189)	+	L1MD2	LINE/L1	4205	4709	(1437)	2431615
1736	20.6	1.9	2.2	chr22	19212280	19212590	(31605878)	+	AluJb	SINE/Alu	3	312	(0)	2431617
293	9.1	3.5	15.4	chr22	19293381	19293445	(31525023)	C	MLT1A1	LTR/ERVL-MaLR	(349)	59	3	2431745
251	21.7	4.6	0.0	chr22	19293446	19293527	(31524941)	C	LTR50	LTR/ERVL	(24)	771	686	2431746
2034	22.5	1.8	1.8	chr22	19333510	19333973	(31484495)	C	L1M4c	LINE/L1	(4915)	1469	1002	2431829
2382	10.7	0.0	0.0	chr22	19396234	19396541	(31421927)	+	AluSq	SINE/Alu	1	308	(5)	2431927
2337	10.2	0.3	0.0	chr22	19409280	19409582	(31408886)	C	AluSx	SINE/Alu	(8)	304	1	2431943
4938	18.3	5.3	5.6	chr22	19415152	19415506	(31402962)	+	L1MB2	LINE/L1	4203	4543	(1597)	2431959
2310	10.6	0.0	0.0	chr22	19415507	19415799	(31402669)	+	AluSp	SINE/Alu	1	293	(20)	2431960
291	29.7	5.1	5.1	chr22	19423145	19423261	(31395207)	+	L2a	LINE/L2	3117	3233	(193)	2431976
50	0.0	0.0	0.0	chr22	19423483	19423525	(31394943)	+	(AC)n	Simple_repeat	1	43	(0)	2431981
2329	11.1	0.3	0.0	chr22	19445674	19445971	(31372497)	C	AluSx1	SINE/Alu	(11)	301	3	2432019
840	18.1	0.0	0.8	chr22	19445983	19446115	(31372353)	C	AluJo	SINE/Alu	(179)	133	2	2432020
373	25.0	0.0	6.8	chr22	19446120	19446222	(31372246)	C	L1ME4a	LINE/L1	(762)	5362	5267	2432018
576	29.4	11.7	0.7	chr22	19513506	19513779	(31304689)	C	HAL1	LINE/L1	(577)	1930	1623	2432125
5195	16.8	8.0	4.0	chr22	19551862	19552333	(31266135)	C	L1MB5	LINE/L1	(1385)	5259	4747	2432196
2146	15.4	0.0	0.0	chr22	19582751	19583056	(31235412)	+	AluSq2	SINE/Alu	3	308	(5)	2432258
2031	13.8	0.0	0.3	chr22	19583081	19583371	(31235097)	+	AluJb	SINE/Alu	5	294	(18)	2432259
1420	16.5	9.2	1.9	chr22	19599017	19599304	(31219164)	C	AluJr	SINE/Alu	(0)	312	1	2432290
1918	12.0	3.0	0.6	chr22	19641460	19641786	(31176682)	+	MER1B	DNA/hAT-Charlie	4	338	(1)	2432364
32	5.4	0.0	0.0	chr22	19648665	19648703	(31169765)	+	(AACAA)n	Simple_repeat	1	39	(0)	2432373
9688	18.4	6.7	3.7	chr22	19648704	19649055	(31169413)	+	L1M4	LINE/L1	1884	2241	(5276)	2432369
11811	16.2	4.5	2.1	chr22	19651260	19652402	(31166066)	+	L1M4	LINE/L1	3867	5043	(1601)	2432369
8325	17.0	5.5	5.3	chr22	19681384	19682759	(31135709)	+	L1MDa	LINE/L1	1012	2390	(4243)	2432423
1928	15.5	3.9	1.0	chr22	19682760	19683062	(31135406)	+	AluJr4	SINE/Alu	1	312	(0)	2432426
213	31.5	6.9	4.2	chr22	19728457	19728668	(31089800)	+	L2b	LINE/L2	2996	3213	(162)	2432485
4349	27.1	11.6	2.5	chr22	19832579	19833424	(30985044)	+	L1MEf	LINE/L1	520	1419	(5221)	2432586
2071	18.5	6.7	2.8	chr22	19942683	19943183	(30875285)	C	MER67A	LTR/ERV1	(21)	522	1	2432714
818	24.7	2.9	5.3	chr22	19943187	19943365	(30875103)	C	MER31-int	LTR/ERV1	(24)	4912	4731	2432714
1949	15.8	2.6	0.0	chr22	19943366	19943669	(30874799)	+	AluJr	SINE/Alu	1	312	(0)	2432715
17	21.9	4.5	5.4	chr22	20021145	20021232	(30797236)	+	(GGCTCCG)n	Simple_repeat	1	92	(0)	2432801
2283	10.8	0.0	0.0	chr22	20026118	20026414	(30792054)	+	AluSg	SINE/Alu	1	297	(13)	2432806
1403	18.9	5.4	0.0	chr22	20096506	20096801	(30721667)	C	L1MB7	LINE/L1	(0)	6184	5872	2432907
3604	19.8	6.5	4.8	chr22	20096803	20097846	(30720622)	C	L1M4	LINE/L1	(5948)	1569	1268	2432908
2154	14.5	2.4	0.0	chr22	20128305	20128635	(30689833)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	2432938
17	10.4	0.0	3.0	chr22	20203964	20203996	(30614472)	+	(GGAAGG)n	Simple_repeat	1	33	(0)	2433013
1495	21.9	0.3	6.5	chr22	20257290	20257674	(30560794)	+	MLT1A	LTR/ERVL-MaLR	14	374	(0)	2433053
4625	23.4	9.1	8.6	chr22	20374071	20374582	(30443886)	+	L1M3de	LINE/L1	1548	2078	(4575)	2433186
2354	10.8	0.0	0.0	chr22	20411706	20412010	(30406458)	+	AluSx1	SINE/Alu	1	305	(7)	2433262
1518	23.0	11.7	3.9	chr22	20455606	20456082	(30362386)	+	LTR43	LTR/ERV1	100	765	(0)	2433340
290	35.0	7.2	2.7	chr22	20456204	20456388	(30362080)	+	L2a	LINE/L2	3228	3421	(5)	2433339
1943	13.2	1.4	0.0	chr22	20494388	20494676	(30323792)	C	AluSx	SINE/Alu	(19)	293	1	2433425
113	29.2	1.3	4.4	chr22	20496137	20496610	(30321858)	+	(TCCC)n	Simple_repeat	1	480	(0)	2433428
308	18.9	1.8	4.9	chr22	20502534	20502661	(30315807)	+	MER31-int	LTR/ERV1	2351	2445	(2435)	2433438
2225	8.6	0.0	0.3	chr22	20502667	20502958	(30315510)	+	AluYm1	SINE/Alu	2	292	(19)	2433444
1948	11.0	0.7	6.0	chr22	20519438	20519754	(30298714)	C	AluSx	SINE/Alu	(12)	300	1	2433478
3145	14.8	1.4	3.2	chr22	20540588	20540892	(30277576)	+	L1MB8	LINE/L1	4980	5288	(858)	2433519
29	0.0	0.0	0.0	chr22	20540893	20540919	(30277549)	+	(CAA)n	Simple_repeat	1	27	(0)	2433521
3145	15.8	3.6	4.6	chr22	20540920	20540947	(30277521)	+	L1MB8	LINE/L1	5289	5305	(873)	2433519
2276	7.1	0.0	4.3	chr22	20540948	20541271	(30277197)	+	AluY	SINE/Alu	2	311	(0)	2433522
232	17.4	0.0	8.0	chr22	20546084	20546133	(30272335)	C	L1MC5a	LINE/L1	(345)	2432	2387	2433532
1653	25.1	8.0	8.2	chr22	20556122	20556302	(30262166)	C	L1MD2	LINE/L1	(13)	6346	6178	2433543
2114	11.1	0.7	0.0	chr22	20556303	20556599	(30261869)	C	AluSq	SINE/Alu	(14)	299	1	2433544
874	26.1	7.0	0.3	chr22	20559180	20559528	(30258940)	+	L1MEd	LINE/L1	925	1298	(5873)	2433547
330	31.2	19.4	1.7	chr22	20560696	20560868	(30257600)	C	MIR	SINE/MIR	(36)	226	16	2433552
886	29.8	5.1	7.9	chr22	20560888	20561238	(30257230)	+	L1MEd	LINE/L1	1834	2170	(4140)	2433547
1627	20.5	15.1	10.1	chr22	20563052	20563741	(30254727)	+	L1MD1	LINE/L1	5452	6181	(61)	2433558
784	13.5	2.6	4.5	chr22	20563742	20563896	(30254572)	C	L1MB8	LINE/L1	(0)	6178	6027	2433559
2297	11.0	0.0	0.0	chr22	20577925	20578224	(30240244)	C	AluSq2	SINE/Alu	(13)	300	1	2433580
3271	15.4	3.1	4.5	chr22	20639785	20640449	(30178019)	+	L1MA4	LINE/L1	5641	6295	(5)	2433670
202	10.3	2.5	2.5	chr22	20650974	20651013	(30167455)	C	L2b	LINE/L2	(4)	3371	3332	2433699
704	27.1	9.8	14.9	chr22	20740090	20741170	(30077298)	+	L1M4a1	LINE/L1	921	2184	(395)	2433837
2247	8.8	0.0	0.0	chr22	20769388	20769683	(30048785)	+	AluSc8	SINE/Alu	1	296	(15)	2433889
229	30.7	1.0	1.9	chr22	20769684	20769762	(30048706)	+	L1MC4	LINE/L1	7576	7654	(388)	2433888
275	26.6	15.8	0.0	chr22	20813021	20813174	(30005294)	+	MIRc	SINE/MIR	21	203	(65)	2433974
2290	10.7	0.0	0.3	chr22	20821220	20821519	(29996949)	C	AluSq	SINE/Alu	(14)	299	1	2433992
2185	11.1	0.7	1.3	chr22	20821589	20821894	(29996574)	C	AluSp	SINE/Alu	(9)	304	1	2433993
359	22.5	8.5	2.7	chr22	20823468	20823654	(29994814)	+	Tigger15a	DNA/TcMar-Tigger	467	665	(50)	2433998
4437	16.2	5.4	3.1	chr22	20848261	20849573	(29968895)	+	L1MB8	LINE/L1	4562	5888	(290)	2434045
2029	9.7	5.6	0.0	chr22	20869003	20869270	(29949198)	+	AluSx3	SINE/Alu	9	292	(19)	2434096
475	31.2	16.8	5.6	chr22	20869271	20869519	(29948949)	C	L2a	LINE/L2	(126)	3249	2967	2434095
1392	7.7	0.0	0.6	chr22	21002626	21002808	(29815660)	C	AluYh3	SINE/Alu	(0)	311	130	2434376
737	10.4	0.0	0.0	chr22	21003538	21003633	(29814835)	+	AluSz6	SINE/Alu	202	297	(15)	2434379
2232	10.5	0.0	0.7	chr22	21555341	21555636	(29262832)	+	AluSx	SINE/Alu	1	294	(18)	2435408
2357	10.4	0.0	0.0	chr22	21555650	21555948	(29262520)	+	AluSz	SINE/Alu	1	299	(13)	2435409
1057	17.7	1.2	0.0	chr22	21556249	21556412	(29262056)	+	FRAM	SINE/Alu	1	166	(10)	2435411
1661	14.9	0.0	9.5	chr22	21556426	21556761	(29261707)	C	AluJb	SINE/Alu	(8)	304	1	2435412
1689	14.0	2.5	0.0	chr22	21571431	21571701	(29246767)	C	AluSq2	SINE/Alu	(35)	278	1	2435448
2190	10.5	0.0	0.0	chr22	21600414	21600708	(29217760)	+	AluSx1	SINE/Alu	1	295	(17)	2435506
740	16.1	0.0	14.2	chr22	21604934	21605138	(29213330)	C	AluJo	SINE/Alu	(6)	306	131	2435517
1587	12.5	0.0	8.3	chr22	21605186	21605473	(29212995)	C	AluSc8	SINE/Alu	(4)	307	44	2435518
2212	9.3	0.0	2.6	chr22	21607225	21607537	(29210931)	+	AluSx1	SINE/Alu	1	305	(7)	2435525
2511	18.3	9.5	2.4	chr22	21615635	21616227	(29202241)	+	Tigger17a	DNA/TcMar-Tigger	2	641	(13)	2435542
510	16.4	5.9	0.8	chr22	21616238	21616366	(29202102)	+	L1MB7	LINE/L1	5922	6057	(127)	2435539
2323	7.5	0.0	3.3	chr22	21616369	21616675	(29201793)	+	AluSc	SINE/Alu	1	297	(12)	2435543
16	9.8	0.0	0.0	chr22	21698262	21698283	(29120185)	+	(A)n	Simple_repeat	1	22	(0)	2435702
2688	16.9	8.8	1.8	chr22	21841172	21841733	(28976735)	+	L1MC3	LINE/L1	6790	7394	(391)	2436021
1081	22.5	9.5	0.0	chr22	21842919	21843203	(28975265)	C	MER46C	DNA/TcMar-Tigger	(23)	315	1	2436026
1383	17.4	10.9	1.1	chr22	21843911	21844183	(28974285)	C	MSTD	LTR/ERVL-MaLR	(3)	393	91	2436027
3396	26.9	9.1	1.3	chr22	21902783	21903495	(28914973)	C	L1MD2	LINE/L1	(5741)	806	35	2436165
2335	10.1	0.0	0.0	chr22	21911396	21911692	(28906776)	+	AluSc8	SINE/Alu	1	297	(14)	2436205
465	21.7	0.0	2.2	chr22	21911696	21911787	(28906681)	+	AluSz	SINE/Alu	44	133	(179)	2436206
345	29.2	6.1	0.7	chr22	21972203	21972357	(28846111)	+	L1ME4a	LINE/L1	5961	6124	(0)	2436291
193	32.2	6.2	7.9	chr22	21974882	21975046	(28843422)	+	L2	LINE/L2	411	572	(2847)	2436297
344	32.8	14.7	1.6	chr22	22010126	22010432	(28808036)	+	L1MEh	LINE/L1	278	631	(1604)	2436369
230	31.3	7.8	0.6	chr22	22010531	22010697	(28807771)	+	L1MEh	LINE/L1	775	954	(1281)	2436369
2166	12.9	0.3	0.0	chr22	22014098	22014391	(28804077)	+	AluSx	SINE/Alu	1	295	(17)	2436381
3878	16.9	1.5	8.2	chr22	22014392	22014532	(28803936)	+	L1MB4	LINE/L1	4785	4922	(1399)	2436371
1147	16.2	13.7	7.3	chr22	22014533	22014804	(28803664)	+	AluJo	SINE/Alu	1	292	(20)	2436382
4156	18.4	3.4	3.9	chr22	22015307	22016092	(28802376)	+	L1MB4	LINE/L1	5272	6076	(279)	2436371
24095	6.1	0.4	0.4	chr22	22050965	22052098	(28766370)	C	L1PA6	LINE/L1	(4)	6323	5191	2436423
2444	6.2	0.3	1.3	chr22	22052099	22052402	(28766066)	C	AluY	SINE/Alu	(10)	301	1	2436424
24095	8.2	0.6	0.6	chr22	22052403	22055863	(28762605)	C	L1PA6	LINE/L1	(1129)	5190	1756	2436423
250	31.4	7.5	0.8	chr22	22060303	22060427	(28758041)	C	L1ME2	LINE/L1	(2)	6162	6029	2436426
22	3.3	0.0	3.0	chr22	22062286	22062318	(28756150)	+	(ATTT)n	Simple_repeat	1	33	(0)	2436428
321	25.0	12.6	2.4	chr22	22090161	22090324	(28728144)	+	L1MEg1	LINE/L1	3067	3249	(4084)	2436460
329	27.9	2.9	1.2	chr22	22090385	22090551	(28727917)	+	L1MEg1	LINE/L1	3369	3538	(3699)	2436460
2988	25.2	4.9	3.9	chr22	22092888	22094050	(28724418)	+	L1MA6	LINE/L1	5094	6273	(27)	2436466
3478	23.1	3.7	2.5	chr22	22095157	22096680	(28721788)	+	L1PA16	LINE/L1	4614	6157	(9)	2436470
40	0.0	0.0	0.0	chr22	22096686	22096719	(28721749)	+	(AC)n	Simple_repeat	1	34	(0)	2436471
415	30.7	2.9	4.5	chr22	22096758	22097071	(28721397)	+	L1M3	LINE/L1	4741	5049	(1091)	2436472
3641	19.7	8.7	1.0	chr22	22107424	22108218	(28710250)	C	MER21B	LTR/ERVL	(6)	862	1	2436484
2519	21.5	8.0	4.7	chr22	22121609	22122141	(28696327)	+	L1M4	LINE/L1	3126	3696	(2450)	2436503
1135	27.5	4.3	1.8	chr22	22169121	22169575	(28648893)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	2436555
1265	12.9	5.9	2.8	chr22	22196994	22197208	(28621260)	+	MER30	DNA/hAT-Charlie	9	230	(0)	2436575
372	26.6	2.3	7.7	chr22	22197268	22197450	(28621018)	+	L1MB7	LINE/L1	5799	5971	(213)	2436576
578	17.7	19.7	0.6	chr22	22342570	22342745	(28475723)	+	MLT1B	LTR/ERVL-MaLR	25	242	(148)	2436775
15266	11.9	2.0	0.1	chr22	22411747	22414527	(28403941)	C	L1PB1	LINE/L1	(369)	5782	2949	2436827
2982	9.3	6.1	0.0	chr22	22436423	22436839	(28381629)	C	MLT2A1	LTR/ERVL	(0)	444	1	2436851
829	14.9	0.7	3.5	chr22	22584684	22584824	(28233644)	C	FLAM_C	SINE/Alu	(6)	137	1	2437117
53	21.2	2.4	0.8	chr22	22584845	22584971	(28233497)	+	(TTCTT)n	Simple_repeat	1	130	(0)	2437118
24	18.4	1.9	0.0	chr22	22584935	22584986	(28233482)	+	(CTC)n	Simple_repeat	1	53	(0)	2437119
30	30.4	2.6	4.4	chr22	22584972	22584998	(28233470)	+	(TTCTTT)n	Simple_repeat	1	158	(0)	2437120
5273	18.0	3.4	3.6	chr22	22585002	22585641	(28232827)	C	L1MA10	LINE/L1	(2196)	3944	3329	2437115
39	11.2	4.3	0.0	chr22	22763861	22763930	(28054538)	+	(AAT)n	Simple_repeat	1	73	(0)	2437353
236	28.1	0.5	1.1	chr22	35195204	35195816	(15622652)	+	(AT)n	Simple_repeat	1	616	(0)	2462452
27	18.0	0.0	0.0	chr22	40177925	40177974	(10640494)	+	GA-rich	Low_complexity	1	50	(0)	2473082
2875	15.6	12.1	0.2	chr22	40814035	40814665	(10003803)	+	LTR62	LTR/ERVL	1	709	(0)	2474419
5380	21.7	6.5	9.0	chr22	45872756	45873613	(4944855)	+	L1MEc	LINE/L1	1021	1926	(4474)	2484675
3666	24.6	6.7	3.7	chr3	1808420	1809867	(196485692)	+	L1MDa	LINE/L1	996	2507	(4126)	2494919
169	33.6	0.0	0.0	chr3	4456620	4457095	(193838464)	+	(AT)n	Simple_repeat	1	476	(0)	2499027
975	11.2	0.0	0.0	chr3	4457117	4457241	(193838318)	C	Alu	SINE/Alu	(187)	125	1	2499028
355	38.4	0.0	0.8	chr3	5429394	5429519	(192866040)	+	MIR	SINE/MIR	5	129	(133)	2500806
3235	9.8	2.0	0.2	chr3	6518751	6519188	(191776371)	+	LTR10B	LTR/ERV1	1	446	(59)	2502374
682	21.5	9.5	9.5	chr3	7432747	7433137	(190862422)	+	L1MEd	LINE/L1	962	1352	(5734)	2503782
6993	21.2	5.9	1.5	chr3	10636517	10639054	(187656505)	+	L1MEc	LINE/L1	31	2761	(3558)	2509813
2354	11.2	0.0	0.0	chr3	12433256	12433567	(185861992)	+	AluSz	SINE/Alu	1	312	(0)	2513246
3664	18.5	3.9	2.5	chr3	13002583	13003163	(185292396)	+	L1MB7	LINE/L1	5232	5826	(358)	2514454
173	37.6	0.0	2.3	chr3	15591846	15592544	(182703015)	+	(AT)n	Simple_repeat	1	699	(0)	2519110
312	26.9	9.7	0.0	chr3	20323561	20323653	(177971906)	C	LTR46	LTR/ERV1	(357)	103	1	2526022
394	34.6	3.1	2.6	chr3	20323680	20323869	(177971690)	C	L2b	LINE/L2	(185)	3190	3000	2526021
264	24.4	4.1	13.2	chr3	25784246	25784434	(172511125)	+	MER112	DNA/hAT-Charlie	2	172	(89)	2533802
2551	26.9	5.2	1.7	chr3	32982538	32983602	(165311957)	C	L1MEd	LINE/L1	(4375)	2040	973	2545062
308	24.9	2.6	1.3	chr3	37996442	37996559	(160299000)	C	MER91B	DNA/hAT-Tip100	(3318)	206	20	2552382
350	23.6	0.9	7.8	chr3	37996618	37996732	(160298827)	+	MER94	DNA/hAT-Blackjack	5	111	(23)	2552383
2052	19.6	3.3	7.5	chr3	40299911	40300324	(157995235)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2555722
783	23.9	9.5	1.1	chr3	40300325	40300595	(157994964)	+	L1MEc	LINE/L1	255	550	(5850)	2555720
1156	24.1	11.5	5.9	chr3	42599706	42600191	(155695368)	+	L1M5	LINE/L1	4897	5394	(752)	2559371
3165	24.9	8.0	3.0	chr3	43123493	43124584	(155170975)	+	L1MEg	LINE/L1	223	1373	(4711)	2560178
521	18.9	5.4	0.9	chr3	43584248	43584354	(154711205)	+	LTR18B	LTR/ERVL	1	112	(502)	2560826
1592	12.0	11.6	0.3	chr3	43584379	43584670	(154710889)	+	LTR18B	LTR/ERVL	286	614	(0)	2560826
4308	8.9	3.0	2.7	chr3	44441213	44441528	(153854031)	C	MER41B	LTR/ERV1	(320)	314	1	2562107
288	25.4	6.3	6.9	chr3	44441529	44441540	(153854019)	C	L1ME3G	LINE/L1	(445)	479	468	2562106
208	34.8	2.8	0.0	chr3	44441542	44441610	(153853949)	C	MIRc	SINE/MIR	(129)	139	69	2562109
321	2.6	0.0	0.0	chr3	45061246	45061284	(153234275)	+	MER4C	LTR/ERV1	1	39	(426)	2563146
3845	11.1	0.7	2.0	chr3	45061285	45061704	(153233855)	+	MER41A	LTR/ERV1	1	415	(139)	2563147
2291	10.0	2.4	5.7	chr3	45062646	45062764	(153232795)	+	MER41B	LTR/ERV1	511	634	(0)	2563149
2642	11.2	6.7	1.0	chr3	45062765	45063169	(153232390)	+	MER4C	LTR/ERV1	36	465	(0)	2563146
4406	10.4	2.8	0.2	chr3	45064653	45065269	(153230290)	C	MER41B	LTR/ERV1	(0)	634	1	2563155
1433	14.7	7.3	6.0	chr3	45102677	45102961	(153192598)	C	AluJb	SINE/Alu	(23)	289	1	2563229
12898	20.7	4.0	1.8	chr3	72224072	72225635	(126069924)	C	L1M4b	LINE/L1	(3871)	2996	1421	2608737
4517	9.8	1.6	0.3	chr3	99776580	99777203	(98518356)	C	MER41B	LTR/ERV1	(0)	634	3	2640691
52313	17.9	1.7	1.8	chr3	101632600	101641508	(96654051)	+	HERVS71-int	LTR/ERV1	4	8909	(69)	2643354
3707	12.2	3.0	0.2	chr3	101641509	101642056	(96653503)	+	LTR6A	LTR/ERV1	1	564	(0)	2643355
3986	13.8	4.5	2.8	chr3	141312045	141312735	(56982824)	C	LTR62	LTR/ERVL	(5)	704	1	2702098
1916	26.8	9.3	7.1	chr3	143173154	143174280	(55121279)	C	L1MEg	LINE/L1	(4859)	1225	72	2705302
3387	19.9	12.1	3.6	chr3	143957812	143959060	(54336499)	C	HAL1M8	LINE/L1	(907)	2084	715	2706403
1824	26.3	7.6	0.6	chr3	143959066	143959760	(54335799)	+	L1MEf	LINE/L1	908	1655	(4587)	2706404
3004	24.6	1.9	4.5	chr3	150484144	150484795	(47810764)	+	L1MB1	LINE/L1	1501	2437	(4600)	2715299
16	12.8	2.8	2.7	chr3	152321892	152321927	(45973632)	+	(GTT)n	Simple_repeat	1	37	(0)	2718031
4419	30.1	4.2	5.1	chr3	152538515	152540540	(45755019)	+	L1PB4	LINE/L1	772	2914	(4652)	2718321
2339	9.3	6.5	0.0	chr3	155306930	155307272	(42988287)	C	L1PB1	LINE/L1	(2)	6149	5783	2722300
110	25.2	0.4	0.4	chr3	155307275	155307522	(42988037)	+	(TA)n	Simple_repeat	1	249	(0)	2722301
3403	6.7	4.4	4.2	chr3	155307526	155308114	(42987445)	C	L1PB1	LINE/L1	(361)	5790	5196	2722300
21580	13.7	4.3	3.0	chr3	155790436	155793527	(42502032)	+	L1MA3	LINE/L1	19	3144	(4421)	2723012
7722	25.1	7.5	4.0	chr3	159599726	159602382	(38693177)	C	L1MA4A	LINE/L1	(4090)	3476	727	2728446
2100	29.9	4.7	5.2	chr3	169674087	169674523	(28621036)	C	L1MEd	LINE/L1	(5824)	1262	846	2741655
2642	11.0	0.5	1.1	chr3	170699688	170700064	(27595495)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2743453
1077	32.1	7.7	3.8	chr3	182787062	182787397	(15508162)	C	L4_A_Mam	LINE/RTE-X	(309)	4681	4328	2761573
1512	33.1	11.2	6.0	chr3	182787424	182788519	(15507040)	C	L4_A_Mam	LINE/RTE-X	(732)	4258	3102	2761573
2328	10.2	0.0	1.0	chr3	189745427	189745731	(8549828)	+	AluSc	SINE/Alu	1	302	(7)	2774027
13410	18.7	5.1	4.5	chr3	189745732	189748035	(8547524)	+	L1MA4A	LINE/L1	2620	4884	(2678)	2774026
393	14.3	3.1	0.0	chr3	196047770	196047832	(2247727)	+	MER33	DNA/hAT-Charlie	17	81	(243)	2784089
1002	15.3	1.3	0.0	chr3	196047869	196048018	(2247541)	+	AluSz6	SINE/Alu	148	299	(13)	2784090
3707	24.9	9.6	5.3	chr3	196736753	196737287	(1558272)	C	L1MEd	LINE/L1	(5580)	1506	920	2785660
2414	9.3	0.0	0.3	chr3	196737288	196737598	(1557961)	C	AluSq2	SINE/Alu	(3)	310	1	2785662
11268	13.9	6.8	0.9	chr4	1181486	1182988	(189031567)	+	L1MB3	LINE/L1	20	1655	(4729)	2789966
351	31.7	0.1	0.1	chr4	18368992	18369940	(171844615)	+	(TA)n	Simple_repeat	1	950	(0)	2817796
114	28.6	0.3	0.3	chr4	48120101	48120392	(142094163)	+	(AT)n	Simple_repeat	1	293	(0)	2863313
4235	9.7	3.6	2.9	chr4	67721662	67722290	(122492265)	C	MER41B	LTR/ERV1	(0)	634	1	2887372
3975	15.0	1.3	2.5	chr4	67722291	67722558	(122491997)	+	LTR58	LTR/ERV1	410	673	(6)	2887371
2420	22.5	11.7	16.7	chr4	78693589	78694457	(111520098)	C	LTR8B	LTR/ERV1	(0)	820	1	2902577
900	27.9	8.1	4.2	chr4	89078186	89078570	(101135985)	+	L1M4a2	LINE/L1	1101	1475	(1181)	2918088
27	0.0	0.0	0.0	chr4	89078571	89078596	(101135959)	+	(AAAG)n	Simple_repeat	1	26	(0)	2918089
900	29.9	10.1	5.3	chr4	89078597	89078794	(101135761)	+	L1M4a2	LINE/L1	1476	1705	(951)	2918088
6317	19.2	2.1	2.7	chr4	89346721	89348514	(100866041)	C	L1M3f	LINE/L1	(4360)	3205	1418	2918521
20668	14.9	4.8	2.0	chr4	122522442	122526282	(67688273)	C	L1MA1	LINE/L1	(3226)	4339	15	2962584
4509	14.2	4.4	0.7	chr4	123349123	123349802	(66864753)	C	LTR62	LTR/ERVL	(2)	707	2	2963818
1729	17.1	1.4	0.3	chr4	190111667	190111959	(102596)	C	HERVK-int	LTR/ERVK	(6840)	696	401	3054629
1218	8.2	0.0	0.0	chr4	190111960	190112106	(102449)	+	AluYh3	SINE/Alu	136	282	(29)	3054630
9787	17.3	6.2	3.6	chr5	450272	453302	(181084957)	C	L1M4c	LINE/L1	(3229)	3153	25	3055435
264	22.1	5.5	3.4	chr5	463343	463431	(181074828)	+	L1M5	LINE/L1	5314	5404	(839)	3055449
736	22.4	0.2	0.2	chr5	1198319	1199900	(180338359)	+	(CTCTCT)n	Simple_repeat	1	1585	(0)	3056039
1790	16.1	8.9	2.0	chr5	21140769	21141122	(160397137)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3081556
604	13.3	8.5	0.6	chr5	21141123	21142498	(160395761)	+	(AT)n	Simple_repeat	1	1487	(0)	3081557
9732	10.9	5.9	4.5	chr5	21485315	21486863	(160051396)	C	THE1B-int	LTR/ERVL-MaLR	(6)	1574	2	3082065
38	7.0	0.0	0.0	chr5	32299056	32299101	(149239158)	+	(CA)n	Simple_repeat	1	46	(0)	3096565
601	25.4	10.9	1.3	chr5	32299140	32299370	(149238889)	C	MIR	SINE/MIR	(5)	257	2	3096566
284	17.3	1.9	0.0	chr5	62402585	62402636	(119135623)	+	Charlie24	DNA/hAT-Charlie	2391	2443	(7)	3133702
1295	29.9	6.0	5.9	chr5	64963262	64963481	(116574778)	+	L1MEd	LINE/L1	838	1057	(6029)	3137163
4433	7.1	1.4	2.9	chr5	74591530	74591966	(106946293)	C	MER41A	LTR/ERV1	(109)	445	1	3152193
423	26.2	3.1	1.6	chr5	74592001	74592128	(106946131)	+	Charlie2a	DNA/hAT-Charlie	6	135	(2726)	3152195
2283	12.1	0.0	0.0	chr5	90649491	90649788	(90888471)	C	AluSz	SINE/Alu	(14)	298	1	3175060
19	4.3	0.0	0.0	chr5	90649870	90649893	(90888366)	+	(GA)n	Simple_repeat	1	24	(0)	3175061
3028	26.9	10.4	3.1	chr5	91242868	91244374	(90293885)	C	L1MEg	LINE/L1	(4450)	1792	160	3175855
4427	9.5	2.2	0.5	chr5	95728658	95729280	(85808979)	+	MER41B	LTR/ERV1	1	634	(0)	3181579
1528	18.7	3.7	0.9	chr5	95729571	95729915	(85808344)	C	L1MB2	LINE/L1	(62)	6109	5755	3181580
23690	13.1	2.7	1.5	chr5	97153289	97160199	(84378060)	C	L1MA3	LINE/L1	(809)	6915	17	3183648
1042	25.0	4.2	3.2	chr5	108531424	108532124	(73006135)	+	MER61E	LTR/ERV1	1	728	(0)	3197775
1326	25.7	5.6	2.5	chr5	124007716	124008269	(57529990)	C	L1MEc	LINE/L1	(4788)	1612	1041	3218108
289	30.8	0.8	7.0	chr5	124008295	124008423	(57529836)	+	MER103C	DNA/hAT-Charlie	174	294	(3)	3218109
404	30.0	13.6	2.3	chr5	135158283	135158497	(46379762)	C	L1MEd	LINE/L1	(6157)	929	687	3233959
1381	19.5	9.7	4.8	chr5	137826043	137826543	(43711716)	C	L1MEc	LINE/L1	(5069)	1331	804	3237583
249	28.3	11.0	7.8	chr5	138486761	138487005	(43051254)	C	LTR103_Mam	LTR/ERV1?	(221)	254	1	3238959
1045	26.1	6.8	6.1	chr5	172825672	172825967	(8712292)	+	L1MEg	LINE/L1	781	1144	(4940)	3298287
2992	20.4	7.1	3.0	chr5	173520599	173521061	(8017198)	C	L1ME1	LINE/L1	(4973)	1427	944	3299751
2402	7.6	0.3	0.0	chr5	173521062	173521352	(8016907)	C	AluY	SINE/Alu	(17)	294	3	3299758
1042	22.1	8.2	5.0	chr5	179844910	179845200	(1693059)	C	L1MEd	LINE/L1	(5804)	1299	989	3311676
1690	10.1	17.1	0.0	chr5	179845201	179845448	(1692811)	C	AluSz	SINE/Alu	(13)	299	1	3311677
638	0.0	1.4	0.0	chr5	181191687	181191758	(346501)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	3313826
7034	17.9	5.5	1.3	chr6	3010256	3012202	(167793777)	+	L1M3f	LINE/L1	1240	3272	(4293)	3318254
970	28.5	6.7	0.9	chr6	4314192	4314531	(166491448)	C	Tigger13a	DNA/TcMar-Tigger	(410)	361	1	3320275
758	23.0	39.6	4.4	chr6	14711369	14711695	(156094284)	C	L2a	LINE/L2	(545)	2874	2408	3336430
2089	12.1	1.1	0.0	chr6	14711696	14711975	(156094004)	+	AluSx1	SINE/Alu	20	302	(10)	3336432
202	30.6	0.0	2.7	chr6	14797955	14798028	(156007951)	+	L2a	LINE/L2	3343	3414	(12)	3336565
49	25.2	1.4	2.1	chr6	14798035	14798221	(156007758)	+	G-rich	Low_complexity	1	185	(0)	3336566
4557	11.2	0.6	0.6	chr6	15895642	15896271	(154909708)	C	MER41B	LTR/ERV1	(2)	632	3	3338638
3945	13.5	3.6	6.5	chr6	15904250	15904961	(154901018)	C	LTR8	LTR/ERV1	(0)	691	1	3338657
2280	13.5	7.4	0.3	chr6	16044129	16044507	(154761472)	C	LTR47A	LTR/ERVL	(42)	410	3	3338899
2133	13.9	0.7	0.0	chr6	16214180	16214489	(154591490)	C	AluSx1	SINE/Alu	(0)	312	1	3339168
1060	16.1	0.5	11.1	chr6	16214490	16214666	(154591313)	C	LTR8	LTR/ERV1	(522)	169	1	3339167
452	27.8	12.2	2.4	chr6	16214672	16214832	(154591147)	+	Charlie2b	DNA/hAT-Charlie	2457	2647	(135)	3339169
3387	14.0	11.9	1.6	chr6	16265461	16266134	(154539845)	+	LTR12	LTR/ERV1	1	753	(73)	3339250
2040	7.9	7.3	3.1	chr6	16266521	16266810	(154539169)	+	AluYk3	SINE/Alu	1	303	(8)	3339251
1627	13.1	0.6	11.3	chr6	16266811	16267081	(154538898)	+	LTR12_	LTR/ERV1	363	609	(79)	3339252
2325	6.4	0.7	3.0	chr6	16267082	16267379	(154538600)	+	AluYk2	SINE/Alu	1	291	(20)	3339253
1409	29.2	7.6	8.1	chr6	17895026	17895905	(152910074)	C	L1MEg	LINE/L1	(5208)	1034	159	3342021
730	22.1	9.5	6.8	chr6	26205551	26205846	(144600133)	+	LOR1b	LTR/ERV1	3	307	(154)	3354820
686	0.0	0.0	0.0	chr6	26538054	26538127	(144267852)	+	tRNA-Val-GTG	tRNA	1	74	(2)	3355428
385	26.0	1.6	6.8	chr6	27234520	27234651	(143571328)	C	L2a	LINE/L2	(0)	3426	3302	3356549
691	3.7	0.0	0.0	chr6	27297996	27298077	(143507902)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	3356672
8465	3.2	0.0	0.1	chr6	27774460	27775428	(143030551)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	3357571
4484	7.9	2.5	0.0	chr6	27792718	27793312	(143012667)	C	LTR71B	LTR/ERV1	(0)	610	1	3357601
17	0.0	0.0	0.0	chr6	27793440	27793458	(143012521)	+	(A)n	Simple_repeat	1	19	(0)	3357602
2127	9.6	3.0	1.7	chr6	27793592	27793882	(143012097)	C	AluSz	SINE/Alu	(17)	295	1	3357603
331	25.4	24.7	0.4	chr6	27811233	27811465	(142994514)	+	L2a	LINE/L2	3119	3426	(0)	3357635
276	31.0	4.4	1.1	chr6	27836442	27836571	(142969408)	+	L2a	LINE/L2	3235	3417	(9)	3357678
2172	8.1	5.0	0.3	chr6	27892066	27892350	(142913629)	C	AluSc	SINE/Alu	(10)	299	1	3357784
1243	15.4	9.0	6.5	chr6	27892351	27892485	(142913494)	C	AluJr4	SINE/Alu	(178)	134	1	3357783
2178	12.1	1.0	0.3	chr6	27894136	27894440	(142911539)	C	AluSg4	SINE/Alu	(3)	307	1	3357785
626	1.4	0.0	0.0	chr6	27902908	27902978	(142903001)	C	tRNA-Gly-GGY	tRNA	(3)	71	1	3357803
23	10.2	2.4	0.0	chr6	28266946	28266995	(142538984)	+	(AAAACA)n	Simple_repeat	1	51	(0)	3358357
12	19.9	2.3	4.4	chr6	28267225	28267268	(142538711)	+	G-rich	Low_complexity	1	45	(0)	3358358
1485	26.5	9.8	3.1	chr6	28400212	28401574	(142404405)	+	L1MC5a	LINE/L1	7	444	(2333)	3358562
15	13.4	3.0	0.0	chr6	28489545	28489577	(142316402)	+	GA-rich	Low_complexity	1	34	(0)	3358714
339	29.5	3.7	4.3	chr6	28492771	28493099	(142312880)	C	L1M5	LINE/L1	(3010)	3204	2878	3358721
2196	11.2	0.3	0.0	chr6	28855813	28856106	(141949873)	C	AluY	SINE/Alu	(15)	296	2	3359343
641	30.4	5.8	3.5	chr6	28856107	28856412	(141949567)	C	L1MEg	LINE/L1	(6032)	1054	748	3359342
619	1.2	0.0	21.5	chr6	28896222	28896328	(141909651)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3359411
200	14.7	0.0	0.0	chr6	28922704	28922737	(141883242)	C	MIRc	SINE/MIR	(141)	127	94	3359465
305	21.4	4.8	2.0	chr6	28924811	28924910	(141881069)	+	MIR	SINE/MIR	57	159	(103)	3359467
242	25.9	13.5	9.8	chr6	31739151	31739254	(139066725)	+	L2c	LINE/L2	3289	3426	(0)	3363799
2003	7.2	0.4	0.0	chr6	31796292	31796541	(139009438)	+	AluSg7	SINE/Alu	16	266	(43)	3363906
2228	11.0	0.7	1.9	chr6	31796542	31796737	(139009242)	+	AluSx	SINE/Alu	114	306	(6)	3363905
18	11.3	2.5	2.4	chr6	31807224	31807263	(138998716)	+	A-rich	Low_complexity	1	41	(0)	3363933
2228	11.0	0.3	0.0	chr6	31807302	31807602	(138998377)	+	AluSx1	SINE/Alu	1	302	(10)	3363934
2225	9.9	0.0	0.0	chr6	31808329	31808611	(138997368)	C	AluSc	SINE/Alu	(25)	284	2	3363937
882	15.1	16.4	11.9	chr6	31831281	31831504	(138974475)	+	L1MA7	LINE/L1	6055	6289	(2)	3363969
898	16.7	0.0	0.0	chr6	31831525	31831662	(138974317)	+	AluSz	SINE/Alu	1	138	(174)	3363971
16	0.0	0.0	0.0	chr6	31898644	31898660	(138907319)	+	(T)n	Simple_repeat	1	17	(0)	3364123
15	13.7	0.0	0.0	chr6	32972077	32972100	(137833879)	+	(CG)n	Simple_repeat	1	24	(0)	3365688
5237	22.7	6.1	2.2	chr6	34614521	34615243	(136190736)	+	L1MC3	LINE/L1	7009	7765	(20)	3368759
180	34.9	0.0	2.4	chr6	34883167	34883251	(135922728)	C	L2c	LINE/L2	(11)	3376	3294	3369401
1774	17.6	7.3	0.0	chr6	37046605	37046945	(133759034)	+	MLT1B	LTR/ERVL-MaLR	1	368	(22)	3373809
2052	11.4	2.0	0.7	chr6	37046970	37047258	(133758721)	C	AluSx1	SINE/Alu	(19)	293	1	3373810
410	14.6	19.6	0.0	chr6	37175710	37175791	(133630188)	C	MER3	DNA/hAT-Charlie	(107)	102	1	3374141
1846	10.4	3.5	5.7	chr6	37175979	37176275	(133629704)	C	AluSx1	SINE/Alu	(21)	291	2	3374142
4192	20.4	7.6	8.2	chr6	43238847	43239490	(127566489)	+	L1MEc	LINE/L1	722	1398	(5002)	3384984
9534	17.3	4.7	1.3	chr6	43730542	43732826	(127073153)	+	L1M4	LINE/L1	2283	4719	(1925)	3385917
303	31.2	0.8	1.5	chr6	43909340	43909469	(126896510)	C	HAL1	LINE/L1	(387)	2120	1992	3386236
994	23.8	1.1	0.7	chr6	43909488	43909751	(126896228)	C	MIR	SINE/MIR	(1)	267	4	3386237
17	39.7	1.1	1.1	chr6	43910428	43910519	(126895460)	+	(TA)n	Simple_repeat	1	93	(0)	3386239
3364	19.7	7.7	3.0	chr6	47593530	47594294	(123211685)	+	L1MB5	LINE/L1	5371	6174	(0)	3392008
1052	23.9	8.0	7.9	chr6	51090182	51091044	(119714935)	C	L1MEg	LINE/L1	(4821)	1421	550	3396561
1241	24.0	4.4	5.1	chr6	67879083	67879506	(102926473)	+	MER39	LTR/ERV1	1	603	(104)	3416014
2649	2.5	0.3	0.0	chr6	67879508	67879824	(102926155)	C	L1PA2	LINE/L1	(1119)	5027	4710	3416015
180	34.1	8.3	2.2	chr6	73564497	73564586	(97241393)	C	L2c	LINE/L2	(20)	3367	3272	3423772
3782	9.9	10.4	2.2	chr6	73564658	73565059	(97240920)	+	MER41B	LTR/ERV1	1	456	(178)	3423773
1460	23.9	12.0	4.3	chr6	118451377	118452119	(52353860)	C	L1MEd	LINE/L1	(5350)	1736	929	3485185
1001	18.5	3.7	0.9	chr6	136251842	136252054	(34553925)	C	HAL1M8	LINE/L1	(2215)	776	558	3509586
302	32.9	0.4	4.2	chr6	146886813	146886923	(23919056)	C	MIRc	SINE/MIR	(114)	154	41	3524636
4557	10.5	0.9	0.9	chr6	146887061	146887694	(23918285)	C	MER41B	LTR/ERV1	(0)	634	1	3524637
257	24.5	15.9	0.0	chr6	146893144	146893249	(23912730)	+	MIR	SINE/MIR	46	171	(91)	3524643
2253	11.4	0.3	1.3	chr6	146895488	146895795	(23910184)	+	AluSp	SINE/Alu	1	305	(8)	3524645
565	21.6	5.6	0.7	chr6	158004004	158004138	(12801841)	+	LTR87	LTR/ERVL?	480	621	(3)	3541802
4781	9.6	1.6	0.2	chr6	158004149	158004773	(12801206)	+	MER41B	LTR/ERV1	1	634	(0)	3541803
787	19.6	28.0	0.5	chr6	158739606	158739814	(12066165)	C	AluJr	SINE/Alu	(23)	289	1	3543051
1209	23.5	6.6	11.2	chr6	158739815	158739994	(12065985)	C	L1MEg	LINE/L1	(5113)	1129	963	3543050
386	33.7	11.8	3.6	chr6	161064360	161064722	(9741257)	C	L1ME3Cz	LINE/L1	(1169)	4977	4581	3546171
2088	26.2	8.0	3.2	chr6	161192485	161193386	(9612593)	C	L1MEd	LINE/L1	(5264)	1822	874	3546314
497	33.6	6.2	2.9	chr6	161193379	161193657	(9612322)	C	L1MEd	LINE/L1	(6478)	608	320	3546314
1822	31.3	5.6	6.3	chr6	161363249	161363637	(9442342)	+	L1MEd	LINE/L1	815	1200	(5886)	3546566
1015	26.8	9.9	6.6	chr6	161363613	161363877	(9442102)	+	L1MEd	LINE/L1	1313	1606	(5480)	3546566
2547	26.8	11.1	4.1	chr6	163470282	163471785	(7334194)	+	L1MEg	LINE/L1	506	2127	(4115)	3549501
4256	11.2	2.5	0.3	chr6	164337813	164338432	(6467547)	+	MER41B	LTR/ERV1	1	634	(0)	3550658
666	29.9	11.3	2.7	chr6	169474083	169474807	(1331172)	+	L1ME1	LINE/L1	472	1321	(5782)	3556486
4049	27.3	3.2	2.5	chr7	3779973	3782050	(155563923)	+	L1MA7	LINE/L1	502	2248	(4531)	3563808
9480	23.7	4.3	9.3	chr7	12517412	12520310	(146825663)	C	L1MA4A	LINE/L1	(4621)	2945	358	3577443
308	31.1	7.7	2.3	chr7	16261002	16261172	(143084801)	C	HAL1b	LINE/L1	(90)	2331	2151	3582255
13196	20.8	5.8	2.2	chr7	17698388	17703819	(141642154)	+	L1MA9	LINE/L1	1265	6492	(1067)	3584262
14	11.9	8.2	3.8	chr7	66995053	66995101	(92350872)	+	(ACCAA)n	Simple_repeat	1	53	(0)	3651288
892	29.0	9.4	2.8	chr7	68384399	68384926	(90961047)	+	L1MEf	LINE/L1	561	1126	(5074)	3654361
4348	16.1	4.0	2.9	chr7	75997454	75998301	(83347672)	+	L1M3	LINE/L1	3979	4846	(1294)	3671074
2228	12.2	0.0	0.0	chr7	75998302	75998597	(83347376)	C	AluSz6	SINE/Alu	(16)	296	1	3671076
138	31.1	0.0	0.3	chr7	76016110	76016493	(83329480)	+	(AT)n	Simple_repeat	1	384	(0)	3671129
289	4.2	11.1	0.0	chr7	76016507	76016554	(83329419)	+	MLT2A2	LTR/ERVL	508	561	(0)	3671128
7382	6.9	2.4	1.0	chr7	100839970	100841080	(58504893)	+	Harlequin-int	LTR/ERV1	286	1412	(5484)	3707495
758	36.2	12.7	3.5	chr7	105051889	105052516	(54293457)	+	L2b	LINE/L2	2642	3352	(23)	3715075
2079	12.7	0.0	6.3	chr7	105052549	105052879	(54293094)	C	AluSx	SINE/Alu	(2)	310	1	3715081
199	32.5	2.4	3.5	chr7	106542122	106542207	(52803766)	+	L3b	LINE/CR1	4744	4828	(404)	3717728
1160	26.6	10.3	2.2	chr7	106543381	106543791	(52802182)	C	L2a	LINE/L2	(42)	3384	2937	3717731
2756	7.5	15.7	0.7	chr7	106569510	106569937	(52776036)	+	LTR10F	LTR/ERV1	1	504	(7)	3717761
4589	21.6	13.5	2.4	chr7	107543094	107545495	(51800478)	+	L1M3e	LINE/L1	1	2722	(4385)	3719225
223	28.0	12.5	12.5	chr7	116871722	116871877	(42474096)	+	L2c	LINE/L2	3186	3346	(41)	3731682
958	25.2	3.8	11.2	chr7	119946905	119947386	(39398587)	+	LTR68	LTR/ERV1	1	445	(295)	3735749
1373	30.4	4.7	1.8	chr7	121049106	121049597	(38296376)	C	LTR33	LTR/ERVL	(8)	507	1	3737163
227	30.9	4.2	0.0	chr7	121081843	121081910	(38264063)	C	MIRb	SINE/MIR	(15)	253	183	3737207
813	22.7	1.6	2.6	chr7	121164446	121164635	(38181338)	C	MER5A	DNA/hAT-Charlie	(1)	188	1	3737326
4914	21.6	2.5	4.7	chr7	129816684	129817430	(29528543)	C	L1M4	LINE/L1	(2044)	4102	3352	3749898
468	30.8	8.2	6.4	chr7	129899035	129899395	(29446578)	C	L1ME3G	LINE/L1	(338)	586	219	3750048
3948	25.2	8.6	8.6	chr7	131335567	131338619	(28007354)	C	L1MEg	LINE/L1	(3131)	4106	2	3752623
6645	22.0	4.6	3.3	chr7	135155856	135156769	(24189204)	C	L1M2a1	LINE/L1	(4228)	2888	1967	3758524
2310	8.9	0.7	0.0	chr7	135663339	135663642	(23682331)	C	AluSz	SINE/Alu	(5)	307	2	3759375
2223	8.7	3.7	0.0	chr7	135663657	135663943	(23682030)	C	AluSc	SINE/Alu	(11)	298	1	3759376
2074	11.8	0.0	5.1	chr7	138257090	138257402	(21088571)	+	AluY	SINE/Alu	1	297	(14)	3763229
1386	25.3	4.7	4.2	chr7	138257403	138257858	(21088115)	C	MER61E	LTR/ERV1	(208)	571	85	3763227
3710	10.6	1.6	14.0	chr7	138527776	138528547	(20817426)	C	LTR76	LTR/ERV1	(0)	675	1	3763805
367	23.0	16.9	0.0	chr7	139119278	139119390	(20226583)	C	MIRb	SINE/MIR	(97)	171	36	3764958
765	0.0	0.0	0.0	chr7	148941488	148941571	(10404402)	+	HY5	scRNA	1	84	(0)	3779656
1029	0.0	0.0	0.0	chr7	148987137	148987248	(10358725)	C	HY1	scRNA	(7)	112	1	3779772
248	35.5	10.8	1.8	chr7	149759493	149759661	(9586312)	+	L2b	LINE/L2	3180	3365	(10)	3781143
226	32.4	0.0	9.2	chr7	149761673	149761791	(9584182)	+	L2c	LINE/L2	3252	3359	(28)	3781147
627	33.5	1.6	7.0	chr7	150960123	150960290	(8385683)	+	MIR	SINE/MIR	5	172	(90)	3782707
447	8.0	2.6	3.9	chr7	150960291	150960368	(8385605)	C	L1MA5A	LINE/L1	(0)	6297	6221	3782708
3209	21.8	12.0	3.3	chr7	151362591	151363715	(7982258)	+	L1MEc	LINE/L1	215	1450	(4950)	3783323
810	29.6	14.5	7.2	chr7	151486650	151487028	(7858945)	C	L2a	LINE/L2	(615)	2804	2397	3783525
1199	18.0	5.9	1.8	chr7	155310375	155310600	(4035373)	C	MER8	DNA/TcMar-Tigger	(1)	238	3	3789487
2492	29.7	11.8	3.2	chr7	157639817	157641297	(1704676)	+	L1MEd	LINE/L1	410	2033	(5053)	3792640
1096	28.7	5.5	9.2	chr8	11938627	11939448	(133199188)	+	L1MEd	LINE/L1	601	1389	(5714)	3810414
35	0.0	0.0	0.0	chr8	12559871	12559900	(132578736)	+	(AT)n	Simple_repeat	1	30	(0)	3811204
211	35.7	0.9	3.5	chr8	12559901	12560825	(132577811)	+	(GTAT)n	Simple_repeat	1	933	(0)	3811205
1779	27.6	4.2	5.4	chr8	29690574	29691633	(115447003)	+	L1MEd	LINE/L1	689	1729	(4513)	3838353
6146	21.8	3.9	4.2	chr8	30194633	30196322	(114942314)	+	L1MB5	LINE/L1	838	2522	(4995)	3839240
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
3608	12.4	4.2	0.9	chr8	41818754	41819299	(103319337)	+	MER61E	LTR/ERV1	1	565	(4)	3857650
3654	11.8	2.5	3.0	chr8	49110428	49110995	(96027641)	+	MER61E	LTR/ERV1	1	565	(4)	3864039
11216	22.5	3.2	4.4	chr8	91683804	91685702	(53452934)	+	L1MA9	LINE/L1	2151	4063	(3098)	3922841
2712	15.0	9.9	3.0	chr8	97762008	97762531	(47376105)	+	LTR6A	LTR/ERV1	1	564	(0)	3932377
13	0.0	5.0	0.0	chr8	97762557	97762576	(47376060)	+	(TGTT)n	Simple_repeat	1	21	(0)	3932378
197	30.1	0.8	13.4	chr8	97762621	97762638	(47375998)	+	L2c	LINE/L2	3264	3281	(106)	3932379
4178	11.7	0.3	8.7	chr8	97762639	97763208	(47375428)	+	MER41B	LTR/ERV1	1	515	(119)	3932380
969	14.4	0.6	3.0	chr8	97773371	97773537	(47365099)	C	AluJb	SINE/Alu	(13)	299	137	3932406
1053	26.4	8.3	4.8	chr8	99377023	99377603	(45761033)	C	L1MEd	LINE/L1	(5656)	1430	827	3935116
551	25.4	0.0	0.0	chr8	101148543	101148668	(43989968)	+	Charlie9	DNA/hAT-Charlie	2	127	(2630)	3938244
269	30.5	1.0	4.0	chr8	101150420	101150518	(43988118)	+	L3	LINE/CR1	3599	3694	(405)	3938246
181	29.8	0.0	2.1	chr8	103020638	103020685	(42117951)	+	L2a	LINE/L2	3375	3421	(5)	3941611
1042	30.1	7.2	7.4	chr8	108958541	108958780	(36179856)	+	L1MEc	LINE/L1	977	1177	(5223)	3950141
1714	23.5	9.3	6.9	chr8	108958795	108959488	(36179148)	+	L1ME3	LINE/L1	5422	6133	(29)	3950140
7604	13.7	7.2	1.5	chr8	110006296	110009439	(35129197)	C	L1M1	LINE/L1	(735)	6839	2223	3951605
1360	24.7	3.2	1.2	chr8	124810726	124811299	(20327337)	+	L1MEc	LINE/L1	1119	1671	(4816)	3974398
3885	20.1	10.1	7.6	chr8	125318612	125319801	(19818835)	+	L1ME1	LINE/L1	43	1265	(5135)	3975324
418	32.0	4.4	1.9	chr8	127741885	127742040	(17396596)	C	MIRb	SINE/MIR	(53)	215	56	3979963
530	28.8	8.6	2.5	chr8	127742153	127742348	(17396288)	C	MIR	SINE/MIR	(19)	243	35	3979964
2557	14.4	2.7	2.5	chr8	130032606	130032655	(15105981)	+	MER65A	LTR/ERV1	1	48	(397)	3984236
2053	15.7	0.3	0.3	chr8	130032656	130032961	(15105675)	+	AluJo	SINE/Alu	1	306	(6)	3984237
448	30.5	0.0	1.4	chr8	143784750	143784892	(1353744)	C	MLT1I	LTR/ERVL-MaLR	(270)	141	1	4006676
1043	26.4	9.8	2.7	chr8	143784895	143785251	(1353385)	C	L1ME3B	LINE/L1	(5108)	1134	742	4006671
1072	8.4	0.0	0.0	chr8	144061158	144061311	(1077325)	+	MER41A	LTR/ERV1	1	154	(400)	4007036
1672	7.8	0.9	0.5	chr8	144061319	144061535	(1077101)	+	AluSx	SINE/Alu	85	302	(10)	4007037
1807	26.9	8.9	6.2	chr9	19811633	19813317	(118581400)	C	L1MEg1	LINE/L1	(4264)	3069	160	4036924
1675	21.3	7.7	2.7	chr9	33739968	33740522	(104654195)	+	L1MEc	LINE/L1	776	1360	(5040)	4055897
17	37.0	1.5	0.0	chr9	34311776	34311841	(104082876)	+	(AC)n	Simple_repeat	1	67	(0)	4057209
16905	24.2	4.6	3.2	chr9	89272499	89274204	(49120513)	C	L1MA8	LINE/L1	(3549)	4010	2260	4112315
4412	6.5	0.4	0.2	chr9	96420849	96421401	(41973316)	+	MER41A	LTR/ERV1	1	554	(0)	4122837
632	33.7	0.7	1.1	chr9	98326771	98326992	(40067725)	C	MIRb	SINE/MIR	(11)	251	35	4126309
3500	25.0	6.6	1.7	chr9	114022221	114024344	(24370373)	C	L1ME2	LINE/L1	(2449)	3870	1022	4152823
779	31.3	7.6	4.7	chr9	114024322	114025074	(24369643)	C	L1ME2	LINE/L1	(5483)	917	141	4152823
4193	11.2	2.8	3.0	chr9	114557588	114557916	(23836801)	C	MER41B	LTR/ERV1	(290)	344	1	4153921
1994	19.3	4.4	6.4	chr9	114557917	114558081	(23836636)	C	Tigger9b	DNA/TcMar-Tigger	(315)	309	149	4153918
2945	23.7	3.3	2.2	chr9	120807182	120808354	(17586363)	C	L1MA8	LINE/L1	(4179)	3386	2154	4165736
1576	21.6	6.1	3.9	chr9	120834980	120835443	(17559274)	+	L1MB7	LINE/L1	5516	5963	(221)	4165807
11290	19.0	6.7	4.2	chr9	121843975	121846928	(16547789)	+	L1MC2	LINE/L1	466	3562	(3002)	4167797
816	15.6	1.6	0.0	chr9	123847020	123847141	(14547576)	C	AluJr	SINE/Alu	(188)	124	1	4171368
551	25.0	26.7	2.4	chr9	123847145	123847443	(14547274)	+	L1MEd	LINE/L1	988	1359	(5744)	4171369
2133	11.0	0.0	0.7	chr9	128183749	128184066	(10210651)	C	AluSx1	SINE/Alu	(0)	312	2	4179917
268	28.2	3.3	9.4	chr9	128184067	128184156	(10210561)	+	MER113	DNA/hAT-Charlie	312	398	(123)	4179916
1015	16.5	7.1	2.6	chr9	128184221	128184488	(10210229)	+	MER33	DNA/hAT-Charlie	44	324	(0)	4179918
2095	10.9	1.4	1.7	chr9	128193429	128193721	(10200996)	+	AluSx1	SINE/Alu	3	294	(18)	4179941
246	34.7	13.9	0.6	chr9	128193769	128193942	(10200775)	+	MIRb	SINE/MIR	34	234	(34)	4179942
210	32.4	2.6	0.0	chr9	128203054	128203127	(10191590)	+	MIR1_Amn	SINE/MIR	91	166	(64)	4179970
180	28.4	4.5	8.0	chr9	128279068	128279160	(10115557)	C	OldhAT1	DNA/hAT-Ac	(2345)	503	415	4180124
8063	6.3	0.4	0.1	chr9	128279220	128280182	(10114535)	C	LTR13A	LTR/ERVK	(0)	966	1	4180126
2258	11.2	0.0	0.0	chr9	129882789	129883083	(8511634)	C	AluSz	SINE/Alu	(17)	295	1	4183832
2902	16.9	5.6	1.5	chr9	129883084	129883155	(8511562)	C	MER41D	LTR/ERV1	(482)	75	5	4183831
2034	30.6	8.2	7.7	chr9	133501748	133503118	(4891599)	+	L1MEd	LINE/L1	281	1623	(5480)	4190690
4211	10.3	0.0	0.0	chrX	3701577	3702130	(152338765)	+	MER41A	LTR/ERV1	1	554	(0)	4365397
791	28.9	6.4	3.3	chrX	16771508	16771808	(139269087)	+	AluJb	SINE/Alu	2	312	(0)	4386663
66	44.2	0.0	0.0	chrX	44876849	44877122	(111163773)	+	(AT)n	Simple_repeat	1	274	(0)	4429942
1818	16.4	0.0	0.0	chrX	49345995	49346281	(106694614)	C	AluSx	SINE/Alu	(25)	287	1	4437942
8389	16.6	1.9	9.0	chrX	101449217	101451659	(54589236)	C	L1M1	LINE/L1	(4925)	2640	11	4496052
788	19.4	7.0	7.0	chrX	103098300	103098543	(52942352)	C	LTR23-int	LTR/ERV1	(3927)	2260	2017	4498052
3110	18.2	3.7	12.3	chrX	103098747	103099552	(52941343)	C	MER50	LTR/ERV1	(0)	734	1	4498056
11067	14.3	3.0	1.4	chrX	117745006	117748395	(38292500)	+	L1M1	LINE/L1	2246	5696	(1869)	4518110