307	29.9	5.8	2.0	chr1	8604128	8604226	(240352196)	C	MIRb	SINE/MIR	(108)	160	58	11916
464	17.2	0.0	0.0	chr1	8604280	8604366	(240352056)	+	L1MC4a	LINE/L1	7795	7881	(1)	11917
76	7.3	0.0	0.0	chr1	8604574	8604676	(240351746)	+	(AAGG)n	Simple_repeat	1	103	(0)	11918
30	0.0	0.0	0.0	chr1	8817827	8817854	(240138568)	+	(T)n	Simple_repeat	1	28	(0)	12308
400	31.7	4.2	11.4	chr1	9281405	9281685	(239674737)	C	L2b	LINE/L2	(13)	3362	3103	13294
321	27.9	2.8	0.9	chr1	9281695	9281799	(239674623)	+	MIR3	SINE/MIR	81	187	(21)	13295
4386	16.2	2.0	4.1	chr1	22465949	22466968	(226489454)	C	L1MB7	LINE/L1	(100)	6084	5096	40231
16	7.1	3.1	3.0	chr1	23554882	23554913	(225401509)	+	(GAGCCA)n	Simple_repeat	1	33	(0)	42730
456	27.0	6.0	0.8	chr1	23555295	23555421	(225401001)	+	MIRb	SINE/MIR	22	155	(113)	42731
505	18.2	0.0	0.0	chr1	23836885	23836972	(225119450)	+	LTR1A2	LTR/ERV1	7	94	(743)	43485
505	18.2	0.0	0.0	chr1	23836941	23837028	(225119394)	+	LTR1A2	LTR/ERV1	7	94	(743)	43485
503	15.9	0.0	0.0	chr1	23836997	23837084	(225119338)	+	LTR1A2	LTR/ERV1	7	94	(743)	43485
538	14.8	0.0	0.0	chr1	23837053	23837140	(225119282)	+	LTR1A2	LTR/ERV1	7	94	(743)	43485
526	14.8	0.0	0.0	chr1	23837109	23837196	(225119226)	+	LTR1A2	LTR/ERV1	7	94	(743)	43485
511	15.9	0.0	0.0	chr1	23837165	23837252	(225119170)	+	LTR1A2	LTR/ERV1	7	94	(743)	43485
2167	11.6	3.3	0.0	chr1	28234142	28234433	(220721989)	C	AluSg	SINE/Alu	(8)	302	1	53609
207	23.8	2.3	0.0	chr1	28234538	28234579	(220721843)	+	L2a	LINE/L2	3309	3351	(75)	53610
1198	8.7	0.7	0.0	chr1	28234639	28234814	(220721608)	C	AluSp	SINE/Alu	(0)	313	134	53611
2351	9.2	0.6	1.9	chr1	28234815	28235131	(220721291)	C	AluSp	SINE/Alu	(0)	313	1	53612
379	24.2	10.8	11.4	chr1	28591012	28591111	(220365311)	C	L2b	LINE/L2	(32)	3343	3237	54611
2183	11.7	0.0	3.5	chr1	28591136	28591451	(220364971)	+	AluSx1	SINE/Alu	1	305	(7)	54613
341	25.8	17.2	0.0	chr1	28591669	28591788	(220364634)	+	MIRc	SINE/MIR	44	188	(80)	54614
246	31.5	13.2	0.0	chr1	28713954	28714045	(220242377)	C	MIR1_Amn	SINE/MIR	(124)	106	1	54967
398	29.7	6.9	4.3	chr1	31153275	31153485	(217802937)	C	L2a	LINE/L2	(3)	3423	3207	59970
586	19.1	3.0	0.0	chr1	31153530	31153660	(217802762)	+	L1M5	LINE/L1	5423	5557	(622)	59971
1025	9.4	0.7	5.0	chr1	31153685	31153844	(217802578)	+	AluJb	SINE/Alu	160	312	(0)	59972
199	30.9	6.7	0.0	chr1	31714336	31714419	(217242003)	+	MIR3	SINE/MIR	85	174	(34)	61198
200	35.4	0.0	0.0	chr1	36302736	36302814	(212653608)	C	MIRc	SINE/MIR	(38)	230	152	70605
1645	13.3	0.4	7.0	chr1	36302993	36303263	(212653159)	C	AluSx	SINE/Alu	(59)	253	1	70606
199	22.1	2.2	0.6	chr1	41360857	41360917	(207595505)	C	MIRc	SINE/MIR	(191)	77	11	80667
1877	15.8	2.9	2.9	chr1	46221443	46221753	(202734669)	C	AluJb	SINE/Alu	(1)	311	1	89582
194	29.4	0.0	7.6	chr1	47179564	47179655	(201776767)	C	L2c	LINE/L2	(46)	3341	3257	91049
1520	19.1	1.1	1.8	chr1	54819388	54819670	(194136752)	C	AluJo	SINE/Alu	(31)	281	1	105973
17	7.7	0.0	3.3	chr1	54819758	54819787	(194136635)	+	(TCCC)n	Simple_repeat	1	30	(0)	105974
173	20.2	2.3	2.7	chr1	54819778	54820207	(194136215)	+	(CTTT)n	Simple_repeat	1	440	(0)	105975
1001	27.6	12.6	3.2	chr1	58804893	58805232	(190151190)	+	L2a	LINE/L2	2688	3069	(357)	113557
1108	16.1	6.0	7.2	chr1	62243297	62243341	(186713081)	C	MER20	DNA/hAT-Charlie	(0)	219	178	119824
1872	27.3	6.9	5.7	chr1	64790832	64791567	(184164855)	C	MER21C	LTR/ERVL	(97)	841	5	124510
1375	32.6	5.0	2.0	chr1	65013521	65014330	(183942092)	+	L1MEd	LINE/L1	1551	2386	(5808)	124898
29	25.0	2.3	6.1	chr1	65014336	65014463	(183941959)	+	GA-rich	Low_complexity	1	131	(0)	124902
1262	27.3	7.0	6.5	chr1	65014464	65014684	(183941738)	+	L1MEd	LINE/L1	2379	2602	(5592)	124898
293	21.7	7.5	6.1	chr1	65642514	65642709	(183313713)	C	L1M5	LINE/L1	(754)	5488	5290	126086
267	25.0	9.3	0.0	chr1	65642736	65642803	(183313619)	C	L1ME3	LINE/L1	(1)	6163	6086	126087
1008	22.8	5.4	3.3	chr1	65642798	65643106	(183313316)	C	L1ME3	LINE/L1	(498)	5664	5351	126087
226	25.5	2.7	1.8	chr1	65643077	65643188	(183313234)	C	L1M4a1	LINE/L1	(410)	2169	2057	126088
10167	11.0	4.4	1.4	chr1	67066962	67068493	(181887929)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	128170
395	36.8	12.0	1.1	chr1	67627531	67627989	(181328433)	+	L2a	LINE/L2	1910	2425	(994)	129293
2614	22.9	5.2	2.8	chr1	75914971	75915657	(173040765)	C	L1ME1	LINE/L1	(29)	6150	5446	140640
909	26.8	5.7	1.8	chr1	85073636	85073920	(163882502)	C	L2	LINE/L2	(467)	2952	2656	153559
302	27.4	0.0	1.4	chr1	85073964	85074037	(163882385)	+	L2b	LINE/L2	3302	3374	(1)	153560
597	33.1	11.1	3.0	chr1	85074036	85074633	(163881789)	+	L2a	LINE/L2	2552	3205	(182)	153561
1843	14.9	3.4	1.7	chr1	88736366	88736654	(160219768)	C	AluSx	SINE/Alu	(18)	294	1	158897
4156	25.4	5.7	5.2	chr1	88736655	88736845	(160219577)	C	L1M1	LINE/L1	(5465)	2100	1897	158895
1467	28.6	6.7	5.2	chr1	88737000	88738046	(160218376)	C	L1M1	LINE/L1	(6228)	1337	468	158895
48	14.1	3.1	1.0	chr1	92792614	92792710	(156163712)	+	(TTCC)n	Simple_repeat	1	100	(0)	165085
2055	11.2	0.0	1.1	chr1	109113108	109113392	(139843030)	+	AluJb	SINE/Alu	1	282	(30)	188008
14	19.7	1.9	5.7	chr1	112675192	112675243	(136281179)	+	(CCGCC)n	Simple_repeat	1	53	(0)	193562
539	29.0	12.2	2.1	chr1	112675770	112676012	(136280410)	+	L3	LINE/CR1	3261	3531	(568)	193563
306	21.3	0.0	21.1	chr1	113676809	113676903	(135279519)	+	L2a	LINE/L2	3312	3425	(1)	195344
214	34.9	1.9	4.3	chr1	115138857	115138988	(133817434)	+	L2a	LINE/L2	3263	3424	(2)	197757
1014	28.4	3.5	5.5	chr1	116849438	116849906	(132106516)	C	L1ME4b	LINE/L1	(352)	540	82	200376
181	32.4	9.4	0.7	chr1	116849919	116850064	(132106358)	+	L2c	LINE/L2	2089	2248	(1171)	200377
663	30.7	9.4	0.4	chr1	116850134	116850365	(132106057)	C	MIRb	SINE/MIR	(8)	260	6	200378
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
688	0.0	0.0	0.0	chr1	161399700	161399772	(87556650)	C	tRNA-Val-GTG	tRNA	(3)	73	1	237470
369	32.2	9.2	6.4	chr1	166367789	166368239	(82588183)	+	L2c	LINE/L2	2923	3387	(0)	245175
463	31.9	14.3	4.5	chr1	173702081	173702612	(75253810)	C	L2	LINE/L2	(737)	2682	2090	255960
1825	18.4	0.0	1.3	chr1	173702718	173703021	(75253401)	C	AluJr4	SINE/Alu	(8)	304	5	255961
3579	31.9	5.5	4.9	chr1	179933774	179934995	(69021427)	C	ERV24_Prim-int	LTR/ERV1	(2809)	4766	3499	265560
54	11.6	2.8	2.7	chr1	183023087	183023194	(65933228)	+	(CCCTC)n	Simple_repeat	1	111	(0)	270460
567	29.1	0.5	9.8	chr1	186316977	186317220	(62639202)	C	Charlie15a	DNA/hAT-Charlie	(0)	224	4	275435
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
1388	19.1	9.6	0.4	chr1	200782783	200783064	(48173358)	C	AluJr	SINE/Alu	(0)	312	1	294999
5184	21.5	9.3	1.7	chr1	200783065	200783478	(48172944)	C	L1ME2	LINE/L1	(511)	5653	5205	294998
280	21.5	3.0	0.0	chr1	200890858	200890922	(48065500)	+	L2c	LINE/L2	3320	3386	(1)	295170
17	20.6	1.6	4.8	chr1	202644537	202644597	(46311825)	+	(CCCTCA)n	Simple_repeat	1	62	(0)	298240
14	15.0	0.0	10.9	chr1	203591134	203591188	(45365234)	+	(AGGCAG)n	Simple_repeat	1	55	(0)	299896
503	18.0	0.5	6.2	chr1	203591260	203591374	(45365048)	+	FLAM_C	SINE/Alu	1	229	(73)	299897
258	36.4	14.0	3.9	chr1	204268692	204270676	(44685746)	+	L2b	LINE/L2	494	2711	(708)	301258
147	20.1	4.2	4.2	chr1	204416648	204417105	(44539317)	+	GA-rich	Low_complexity	1	477	(0)	301507
12	8.3	9.5	4.3	chr1	205061438	205061479	(43894943)	+	(CCTTCCCG)n	Simple_repeat	1	46	(0)	302717
2127	9.8	1.0	6.0	chr1	206618941	206619255	(42337167)	+	AluSx1	SINE/Alu	1	299	(13)	305413
1637	16.0	2.8	0.6	chr1	206619256	206619348	(42337074)	+	L1MC	LINE/L1	5482	5575	(604)	305412
1619	15.6	8.0	1.4	chr1	206619349	206619630	(42336792)	+	AluJb	SINE/Alu	1	302	(10)	305414
221	29.6	3.0	1.0	chr1	206912388	206912486	(42043936)	+	MIRc	SINE/MIR	166	266	(2)	305906
14	23.1	5.8	2.7	chr1	218165458	218165526	(30790896)	+	G-rich	Low_complexity	1	73	(0)	322783
2335	10.9	0.3	0.0	chr1	224047195	224047498	(24908924)	+	AluSz6	SINE/Alu	1	305	(7)	331675
2814	14.8	1.8	5.9	chr1	224047499	224048361	(24908061)	+	L1MC1	LINE/L1	5375	6328	(5)	331674
2270	8.4	0.0	4.8	chr1	225633040	225633349	(23323073)	C	AluY	SINE/Alu	(16)	295	1	334268
570	30.5	7.5	2.2	chr1	225633521	225633748	(23322674)	+	MIRb	SINE/MIR	26	266	(2)	334269
2202	14.9	0.7	0.0	chr1	225747236	225747544	(23208878)	C	AluJo	SINE/Alu	(1)	311	1	334512
2327	9.1	0.0	0.0	chr1	228621129	228621435	(20334987)	+	AluY	SINE/Alu	1	307	(4)	338912
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
15	21.3	9.3	0.0	chr1	228735308	228735361	(20221061)	+	(CG)n	Simple_repeat	1	59	(0)	339120
18	10.0	0.0	2.9	chr1	228735416	228735449	(20220973)	+	(CCCG)n	Simple_repeat	1	34	(0)	339121
1748	20.5	11.5	2.4	chr1	229977330	229978046	(18978376)	C	L1ME1	LINE/L1	(15)	6164	5382	341220
1744	17.9	0.4	0.4	chr1	231131882	231132161	(17824261)	+	AluJr	SINE/Alu	3	282	(30)	342971
3746	19.3	3.2	5.7	chr1	231132162	231132476	(17823946)	+	L1MB3	LINE/L1	5475	5728	(2267)	342970
2098	10.3	1.1	0.7	chr1	231132477	231132758	(17823664)	+	AluSz	SINE/Alu	1	283	(29)	342972
5298	14.4	5.4	1.5	chr1	233219638	233220716	(15735706)	C	L1MC1	LINE/L1	(6)	6327	5207	346056
1616	26.4	7.0	5.7	chr1	235482073	235482690	(13473732)	+	L1MEf	LINE/L1	25	651	(5443)	349841
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
1513	23.4	6.3	0.0	chr1	239996852	239997308	(8959114)	C	L1ME2z	LINE/L1	(2919)	3227	2740	356961
32	23.7	2.2	1.1	chr1	241357511	241357599	(7598823)	+	(GATG)n	Simple_repeat	1	91	(0)	359176
58	0.0	0.0	0.0	chr1	241357669	241357720	(7598702)	+	(TTA)n	Simple_repeat	1	52	(0)	359177
1960	18.3	11.3	3.6	chr1	244398725	244399244	(4557178)	C	MLT2B1	LTR/ERVL	(4)	597	17	364132
2296	24.2	10.6	1.5	chr1	246344182	246344955	(2611467)	C	L1ME2	LINE/L1	(65)	6099	5243	367296
22	29.8	0.0	0.0	chr1	246344959	246345015	(2611407)	+	GA-rich	Low_complexity	1	57	(0)	367298
2543	5.8	0.0	0.0	chr1	246700970	246701263	(2255159)	+	AluY	SINE/Alu	2	295	(16)	367943
2712	22.9	5.7	8.3	chr1	246701264	246701679	(2254743)	+	L1ME3	LINE/L1	5356	5771	(391)	367944
2425	6.3	0.0	2.0	chr1	246701680	246701981	(2254441)	+	AluY	SINE/Alu	15	310	(1)	367945
654	23.1	0.8	0.0	chr10	1046072	1046192	(132751230)	C	MER2	DNA/TcMar-Tigger	(0)	345	224	372213
3103	19.8	7.9	2.9	chr10	7327700	7328668	(126468754)	C	L1ME1	LINE/L1	(238)	5941	4923	380847
3121	15.0	1.7	1.5	chr10	11089680	11090200	(122707222)	+	L1PA16	LINE/L1	5645	6166	(0)	386497
1366	4.9	0.0	0.0	chr10	12017743	12017906	(121779516)	C	L1PA7	LINE/L1	(0)	6154	5991	387959
13	14.1	0.0	5.7	chr10	21526051	21526085	(112271337)	+	(CCCCGC)n	Simple_repeat	1	35	(0)	403870
15	23.6	2.2	0.0	chr10	21526167	21526211	(112271211)	+	G-rich	Low_complexity	1	46	(0)	403871
18	13.2	0.0	0.0	chr10	21526217	21526249	(112271173)	+	(GGGAG)n	Simple_repeat	1	33	(0)	403872
2662	18.2	9.3	5.1	chr10	22449997	22450678	(111346744)	+	L1ME3A	LINE/L1	5461	6173	(0)	405282
2142	21.9	3.8	4.2	chr10	22904626	22905240	(110892182)	+	L1MC4a	LINE/L1	7069	7680	(202)	405974
38	9.4	3.3	6.4	chr10	30072103	30072193	(103725229)	+	GA-rich	Low_complexity	1	94	(0)	417998
12	11.1	6.9	0.0	chr10	35372224	35372252	(98425170)	+	GA-rich	Low_complexity	1	31	(0)	426504
15	9.1	8.3	0.0	chr10	49610019	49610054	(84187368)	+	G-rich	Low_complexity	1	39	(0)	442092
17	13.7	5.0	0.0	chr10	49610155	49610194	(84187228)	+	(CCCCG)n	Simple_repeat	1	42	(0)	442093
14	24.9	0.9	4.6	chr10	49610289	49610374	(84187048)	+	G-rich	Low_complexity	1	82	(0)	442094
3505	22.2	4.8	1.1	chr10	56034923	56035410	(77762012)	C	L1MC1	LINE/L1	(6)	6327	5831	450940
2881	14.7	3.8	1.0	chr10	56035411	56035897	(77761525)	C	MER61D	LTR/ERV1	(0)	501	1	450941
1105	29.4	14.6	0.5	chr10	60979589	60980145	(72817277)	C	L2a	LINE/L2	(40)	3386	2734	457913
4886	12.1	5.3	1.5	chr10	64040405	64041130	(69756292)	C	L1MA6	LINE/L1	(162)	6138	5380	462796
474	27.1	10.3	2.7	chr10	64041134	64041357	(69756065)	C	L1M3e	LINE/L1	(5425)	2140	1898	462798
226	18.8	0.0	0.0	chr10	64041385	64041432	(69755990)	C	L1M3e	LINE/L1	(4635)	1930	1883	462798
462	29.0	1.6	0.8	chr10	64041466	64041673	(69755749)	C	L1M3e	LINE/L1	(6676)	813	653	462798
2367	13.4	0.0	0.6	chr10	73579473	73579786	(60217636)	+	AluSx1	SINE/Alu	1	312	(0)	479554
1987	17.0	5.8	9.8	chr10	73579787	73580041	(60217381)	+	L1MD	LINE/L1	5305	5556	(623)	479552
2283	12.4	2.2	0.7	chr10	73580042	73580348	(60217074)	+	AluSx1	SINE/Alu	1	312	(0)	479555
1426	17.0	5.8	9.8	chr10	73580349	73580399	(60217023)	+	L1MD	LINE/L1	5557	5606	(573)	479552
2079	16.8	0.3	5.2	chr10	73580400	73580563	(60216859)	+	Tigger3a	DNA/TcMar-Tigger	2	151	(197)	479556
25	16.6	1.3	7.5	chr10	74825382	74825460	(58971962)	+	G-rich	Low_complexity	1	80	(0)	481941
19	15.9	3.9	1.9	chr10	74825912	74825962	(58971460)	+	G-rich	Low_complexity	1	53	(0)	481942
23	17.6	0.0	1.9	chr10	75111564	75111616	(58685806)	+	(CGCCCC)n	Simple_repeat	1	53	(0)	482444
11	28.5	4.3	5.1	chr10	75111911	75112004	(58685418)	+	G-rich	Low_complexity	1	98	(0)	482445
726	30.4	6.4	2.5	chr10	75801165	75801556	(57995866)	C	L1MEb	LINE/L1	(5606)	1390	983	483619
2131	12.8	0.3	0.7	chr10	97324952	97325256	(36472166)	+	AluSq2	SINE/Alu	1	304	(9)	517727
402	30.7	0.8	4.5	chr10	97325268	97325400	(36472022)	C	MIR1_Amn	SINE/MIR	(81)	149	22	517728
4761	15.1	3.7	2.7	chr10	100531399	100532343	(33265079)	C	L1MB7	LINE/L1	(52)	6132	5170	523509
2353	8.6	0.0	0.0	chr10	101427103	101427415	(32370007)	C	AluSc	SINE/Alu	(0)	309	1	525098
3483	24.7	6.4	1.4	chr10	111213894	111215170	(22582252)	C	L1MC4a	LINE/L1	(1496)	6462	5095	540768
13	14.2	3.2	0.0	chr10	112565701	112565731	(21231691)	+	(ATGGAA)n	Simple_repeat	1	32	(0)	542858
274	23.3	13.1	1.2	chr10	120850917	120851017	(12946405)	+	L2a	LINE/L2	3272	3407	(19)	556296
560	25.0	3.8	1.1	chr10	121613341	121613518	(12183904)	C	MLT1C	LTR/ERVL-MaLR	(28)	439	257	557407
667	18.6	9.7	1.1	chr10	121613704	121613882	(12183540)	C	MLT1C	LTR/ERVL-MaLR	(186)	281	86	557407
2385	6.7	0.0	0.0	chr10	124801228	124801537	(8995885)	C	AluSp	SINE/Alu	(0)	313	2	562494
2077	27.4	6.5	2.7	chr10	125885745	125886441	(7910981)	+	L2a	LINE/L2	2614	3340	(86)	564143
252	26.2	16.1	2.7	chr10	132330162	132330349	(1467073)	+	L1MEi	LINE/L1	1647	1864	(348)	571537
1696	14.8	4.1	4.1	chr10	132330519	132330809	(1466613)	C	AluJr	SINE/Alu	(21)	291	1	571542
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
3304	20.2	6.9	1.6	chr11	8183773	8184652	(126901970)	C	L1ME1	LINE/L1	(27)	6152	5201	583618
981	19.6	8.1	0.0	chr11	9872463	9872722	(125213900)	+	L1M5	LINE/L1	5293	5575	(604)	586681
608	16.9	0.0	0.0	chr11	9872734	9872816	(125213806)	+	AluSz	SINE/Alu	1	83	(229)	586682
2090	6.8	0.0	0.0	chr11	9872983	9873231	(125213391)	+	AluSc8	SINE/Alu	59	307	(4)	586683
2383	26.4	12.1	10.7	chr11	36190508	36191261	(98895361)	+	HAL1	LINE/L1	1102	1913	(594)	628006
1750	13.4	0.4	3.6	chr11	36191262	36191538	(98895084)	+	AluJr	SINE/Alu	11	278	(34)	628012
22	21.3	3.3	5.4	chr11	45180659	45180748	(89905874)	+	G-rich	Low_complexity	1	93	(0)	641656
1843	13.2	0.0	9.3	chr11	47029816	47030155	(88056467)	+	AluJo	SINE/Alu	1	312	(0)	645116
14	24.2	0.0	4.2	chr11	47930883	47930930	(87155692)	+	(CTT)n	Simple_repeat	1	48	(0)	647129
2569	4.7	0.0	0.3	chr11	47931199	47931497	(87155125)	+	AluY	SINE/Alu	1	298	(13)	647130
1355	5.2	9.8	0.0	chr11	57670821	57670994	(77415628)	C	AluSx1	SINE/Alu	(11)	301	109	654244
186	23.3	0.0	0.0	chr11	57671226	57671268	(77415354)	+	MIR1_Amn	SINE/MIR	173	215	(15)	654245
12	21.4	3.3	6.3	chr11	63837172	63837232	(71249390)	+	(GGTAGG)n	Simple_repeat	1	63	(0)	664512
12	22.6	4.2	2.0	chr11	64353234	64353281	(70733341)	+	(GTGTGG)n	Simple_repeat	1	50	(0)	665455
5962	19.6	2.6	3.0	chr11	65455595	65455768	(69630854)	+	Charlie8	DNA/hAT-Charlie	1	152	(2276)	667559
2266	8.9	1.7	0.0	chr11	66022060	66022352	(69064270)	+	AluSx1	SINE/Alu	3	300	(12)	668662
462	25.5	10.8	7.7	chr11	66022353	66022443	(69064179)	+	MIR	SINE/MIR	151	242	(26)	668661
246	32.3	6.1	0.0	chr11	66022699	66022791	(69063831)	+	MIRb	SINE/MIR	139	237	(31)	668663
381	33.3	4.9	3.5	chr11	66290196	66290593	(68796029)	+	L2a	LINE/L2	2947	3413	(13)	669185
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
6632	10.3	5.2	2.7	chr11	72163173	72163994	(62922628)	C	MER61-int	LTR/ERV1	(0)	5217	4360	679462
1789	21.5	7.0	1.8	chr11	72444220	72445077	(62641545)	+	L1ME1	LINE/L1	4936	5736	(443)	679977
270	11.8	0.0	0.0	chr11	72445078	72445111	(62641511)	C	LOR1b	LTR/ERV1	(0)	461	428	679978
14	14.9	5.4	0.0	chr11	72445142	72445178	(62641444)	+	(AGGTCT)n	Simple_repeat	1	39	(0)	679979
206	29.4	7.1	0.0	chr11	72613373	72613464	(62473158)	+	MIR3	SINE/MIR	110	208	(0)	680275
14	12.5	0.0	0.0	chr11	72613486	72613511	(62473111)	+	(CCTC)n	Simple_repeat	1	26	(0)	680276
1719	16.7	2.5	0.0	chr11	87139530	87139840	(47946782)	C	L1ME1	LINE/L1	(504)	5675	5357	706702
443	23.7	3.0	2.4	chr11	87139884	87140056	(47946566)	C	L1ME1	LINE/L1	(967)	5377	5205	706702
270	30.2	8.6	2.8	chr11	103108968	103109185	(31977437)	C	MIRb	SINE/MIR	(8)	260	29	729011
14	17.9	0.0	4.8	chr11	103109529	103109570	(31977052)	+	(CTTCCCC)n	Simple_repeat	1	42	(0)	729012
183	27.7	0.0	6.0	chr11	107017228	107017277	(28069345)	+	X6B_LINE	LINE/CR1	871	917	(155)	734322
27	26.1	0.0	0.0	chr11	107017833	107017905	(28068717)	+	(CGGCAG)n	Simple_repeat	1	73	(0)	734323
2351	9.0	0.0	0.3	chr11	108686796	108687084	(26399538)	C	AluY	SINE/Alu	(23)	288	1	737255
4750	15.1	3.2	2.0	chr11	108687085	108687304	(26399318)	C	L1MC1	LINE/L1	(724)	5609	5387	737254
1486	12.4	0.0	1.8	chr11	108687311	108687527	(26399095)	C	AluJb	SINE/Alu	(16)	296	84	737256
2225	6.2	3.5	4.8	chr11	113772691	113772980	(21313642)	+	AluSx	SINE/Alu	1	286	(26)	745130
343	22.9	14.5	2.3	chr11	118530369	118530520	(16556102)	+	MIRb	SINE/MIR	8	186	(82)	753063
12	10.2	2.7	7.9	chr11	119305489	119305525	(15781097)	+	(CTC)n	Simple_repeat	1	38	(0)	754661
404	33.3	12.6	0.0	chr11	119374440	119374598	(15712024)	C	MIR3	SINE/MIR	(16)	192	11	754758
191	28.2	0.0	0.0	chr11	119741792	119742286	(15344336)	+	(AC)n	Simple_repeat	1	495	(0)	755379
390	25.9	12.4	2.0	chr11	125106252	125106554	(9980068)	+	L1ME3A	LINE/L1	2354	2692	(3522)	763985
2532	23.2	6.0	4.9	chr11	125106525	125107359	(9979263)	+	L1ME3A	LINE/L1	5396	6240	(1)	763985
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
2430	10.4	0.0	0.0	chr12	6359761	6360068	(126915241)	C	AluSx	SINE/Alu	(2)	310	3	788551
2260	14.7	8.7	3.0	chr12	6360069	6360108	(126915201)	+	MSTB	LTR/ERVL-MaLR	393	426	(0)	788550
407	35.0	10.6	2.6	chr12	6416718	6417219	(126858090)	+	L2c	LINE/L2	968	1514	(1905)	788672
422	16.7	0.3	0.0	chr12	6417234	6417317	(126857992)	+	L1ME2	LINE/L1	5459	5543	(790)	788673
3090	14.9	6.0	2.2	chr12	6417322	6417855	(126857454)	C	MER21A	LTR/ERVL	(0)	931	377	788674
15	20.3	2.1	2.1	chr12	8914162	8914208	(124361101)	+	(TCTCCCG)n	Simple_repeat	1	48	(0)	793138
15	31.4	0.0	0.0	chr12	8914413	8914467	(124360842)	+	G-rich	Low_complexity	1	55	(0)	793139
18	8.5	0.0	0.0	chr12	9065149	9065173	(124210136)	+	(C)n	Simple_repeat	1	25	(0)	793385
5449	18.5	13.1	5.2	chr12	9065174	9066669	(124208640)	+	MER52D	LTR/ERV1	490	2121	(2)	793384
2245	7.3	3.0	0.0	chr12	10211957	10212242	(123063067)	C	AluSp	SINE/Alu	(17)	296	2	794931
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
2070	12.8	1.0	0.7	chr12	45991281	45991576	(87283733)	+	AluSz	SINE/Alu	1	297	(15)	841695
2425	9.4	0.0	0.0	chr12	49120693	49121000	(84154309)	C	AluSq2	SINE/Alu	(5)	308	1	846426
14	18.3	7.5	4.2	chr12	51218118	51218184	(82057125)	+	G-rich	Low_complexity	1	72	(0)	850863
412	22.3	17.4	0.6	chr12	51951000	51951157	(81324152)	C	L1ME4a	LINE/L1	(453)	5671	5482	852206
209	30.1	6.7	3.2	chr12	51951201	51951358	(81323951)	C	L2	LINE/L2	(619)	2800	2637	852207
2263	9.2	0.3	0.7	chr12	53390401	53390694	(79884615)	+	AluSx3	SINE/Alu	1	293	(18)	854648
13	12.5	0.0	0.0	chr12	57633134	57633159	(75642150)	+	(CGCAG)n	Simple_repeat	1	26	(0)	861598
14	17.7	0.0	0.0	chr12	57633515	57633546	(75641763)	+	(CCTCCC)n	Simple_repeat	1	32	(0)	861599
2369	23.3	4.6	6.2	chr12	68593319	68593843	(64681466)	C	L1ME1	LINE/L1	(451)	5728	5206	877672
351	32.7	5.8	0.9	chr12	81725455	81725781	(51549528)	+	L1M5	LINE/L1	2928	3271	(2875)	896786
1440	31.4	6.3	2.3	chr12	81725890	81726508	(51548801)	+	L2	LINE/L2	1338	1983	(1436)	896787
15	15.2	2.0	7.7	chr12	85280157	85280207	(47995102)	+	(TCCC)n	Simple_repeat	1	52	(0)	901404
13	23.6	6.0	0.0	chr12	92929241	92929290	(40346019)	+	(GAGC)n	Simple_repeat	1	53	(0)	912350
13	8.1	3.6	3.5	chr12	95474285	95474312	(37800997)	+	GA-rich	Low_complexity	1	29	(0)	917299
2948	21.3	6.2	11.5	chr12	100120400	100121065	(33154244)	+	L1ME1	LINE/L1	5319	5946	(233)	924905
2880	22.1	7.5	0.7	chr12	112884729	112885439	(20389870)	C	L1ME3A	LINE/L1	(7)	6166	5404	950321
404	31.4	4.0	6.7	chr12	112885458	112885589	(20389720)	C	L1M5	LINE/L1	(313)	5811	5689	950322
2190	10.7	1.7	0.3	chr12	113146823	113147113	(20128196)	C	AluSx	SINE/Alu	(17)	295	1	950904
2794	21.0	3.8	5.3	chr12	113147114	113147832	(20127477)	+	L1ME1	LINE/L1	5469	6179	(0)	950900
2149	10.5	3.3	0.3	chr12	114835551	114835845	(18439464)	+	AluSc	SINE/Alu	1	304	(5)	954682
707	16.4	1.6	0.0	chr12	114835859	114835980	(18439329)	+	L1M5	LINE/L1	5476	5599	(580)	954683
659	25.1	1.8	2.9	chr12	114836002	114836173	(18439136)	C	MLT1F2	LTR/ERVL-MaLR	(381)	179	10	954684
13	15.1	0.0	9.1	chr12	114836174	114836217	(18439092)	+	(AAT)n	Simple_repeat	1	44	(0)	954685
1093	15.5	1.4	6.4	chr12	117784508	117784627	(15490682)	C	L1PA16	LINE/L1	(107)	6059	5942	961060
4274	21.7	6.2	6.3	chr12	117784633	117785132	(15490177)	+	L1MEf	LINE/L1	191	717	(5483)	961059
293	27.5	18.0	0.0	chr12	120583689	120583779	(12691530)	C	MIRb	SINE/MIR	(117)	151	41	967435
1699	15.1	4.5	2.0	chr12	121711677	121711980	(11563329)	+	AluSz	SINE/Alu	1	312	(0)	970149
469	28.7	12.5	5.8	chr12	124182806	124183410	(9091899)	+	L2b	LINE/L2	2728	3416	(10)	975624
331	29.4	17.5	6.5	chr12	124940369	124940722	(8334587)	C	L2a	LINE/L2	(18)	3357	2960	977203
388	31.2	6.9	1.4	chr12	124940734	124940951	(8334358)	C	L2a	LINE/L2	(560)	2859	2629	977203
676	9.7	0.0	1.1	chr12	125057471	125057563	(8217746)	+	AluYc	SINE/Alu	193	284	(15)	977492
216	26.4	1.1	8.4	chr12	125057846	125057940	(8217369)	+	L2a	LINE/L2	3279	3366	(9)	977482
232	34.6	10.6	0.0	chr12	125057924	125058024	(8217285)	C	L2b	LINE/L2	(12)	3363	3251	977493
13	23.0	7.1	0.0	chr12	125065504	125065559	(8209750)	+	(GGTCCCT)n	Simple_repeat	1	60	(0)	977507
560	25.0	8.7	4.3	chr12	127081203	127081463	(6193846)	C	L1ME3A	LINE/L1	(481)	5692	5427	980898
693	27.6	7.9	1.3	chr12	127081502	127081890	(6193419)	C	L1ME3A	LINE/L1	(1931)	4215	3799	980898
197	32.1	4.5	0.0	chr12	131033344	131033427	(2241882)	C	L2b	LINE/L2	(2)	3373	3286	987660
12	19.4	0.0	5.1	chr12	132474617	132474655	(800654)	+	(CTTCC)n	Simple_repeat	1	39	(0)	989514
258	19.7	2.9	0.0	chr12	132792517	132792582	(482727)	+	MER5A1	DNA/hAT-Charlie	47	114	(52)	989950
2300	8.5	0.0	3.9	chr13	30249074	30249245	(84115083)	+	AluSq2	SINE/Alu	127	296	(17)	1009347
1936	24.4	7.5	4.5	chr13	30249246	30249807	(84114521)	+	L1ME3A	LINE/L1	5481	6074	(99)	1009346
13	21.9	0.0	2.6	chr13	41458265	41458303	(72906025)	+	(GCCCCG)n	Simple_repeat	1	39	(0)	1025882
12	25.7	0.0	0.0	chr13	41458427	41458463	(72905865)	+	(CAGCGA)n	Simple_repeat	1	37	(0)	1025883
186	13.3	0.0	0.0	chr13	41458540	41458569	(72905759)	+	MIR3	SINE/MIR	117	146	(62)	1025884
7821	23.3	5.6	3.0	chr13	41931712	41934931	(72429397)	+	L1MB7	LINE/L1	2880	6184	(0)	1026567
12636	21.0	4.8	5.1	chr13	62475458	62479788	(51884540)	+	L1M4c	LINE/L1	1458	5851	(574)	1056058
18	14.9	0.0	0.0	chr13	62479887	62479916	(51884412)	+	(T)n	Simple_repeat	1	30	(0)	1056060
4734	27.2	3.7	5.7	chr13	63525185	63526582	(50837746)	+	L1M4b	LINE/L1	10	1379	(5488)	1057397
48	0.0	0.0	0.0	chr13	63526583	63526623	(50837705)	+	(AC)n	Simple_repeat	1	41	(0)	1057398
4734	27.2	3.7	5.7	chr13	63526624	63526664	(50837664)	+	L1M4b	LINE/L1	1380	1419	(5448)	1057397
1236	28.3	9.8	2.1	chr13	70792488	70792956	(43571372)	C	LTR40a	LTR/ERVL	(2)	517	9	1066619
19	13.9	3.9	3.8	chr13	75482400	75482450	(38881878)	+	(TCCT)n	Simple_repeat	1	53	(0)	1073409
12735	15.5	3.2	2.8	chr13	78803723	78806994	(35557334)	+	L1MA4	LINE/L1	2998	6296	(4)	1078059
722	25.0	6.6	0.7	chr13	79252520	79252789	(35111539)	+	L2a	LINE/L2	2520	2806	(613)	1078672
18	10.5	0.0	0.0	chr13	79481622	79481652	(34882676)	+	(TTTGT)n	Simple_repeat	1	31	(0)	1079007
1218	24.3	6.9	10.8	chr13	94589614	94590333	(19773995)	+	L1ME3B	LINE/L1	5319	6022	(220)	1098566
3480	20.5	5.4	2.4	chr13	94636446	94637564	(19726764)	+	L1ME1	LINE/L1	4971	6144	(35)	1098639
339	5.4	6.7	0.0	chr13	96994694	96994749	(17369579)	C	Alu	SINE/Alu	(1)	300	241	1102344
31	17.3	4.0	4.8	chr13	110561742	110561853	(3802475)	+	(CGCCCC)n	Simple_repeat	1	111	(0)	1121399
17	13.0	7.4	3.5	chr14	23551167	23551180	(83492538)	+	(CCGTC)n	Simple_repeat	1	32	(26)	1133020
13	18.2	0.0	0.0	chr14	23551181	23551211	(83492507)	+	(CCCCTC)n	Simple_repeat	1	31	(0)	1133021
17	13.0	7.4	3.5	chr14	23551212	23551220	(83492498)	+	(CCGTC)n	Simple_repeat	33	58	(0)	1133020
2091	9.5	0.0	1.8	chr14	24093397	24093680	(82950038)	+	AluSx3	SINE/Alu	1	279	(32)	1133740
2795	20.1	7.8	4.2	chr14	34590469	34591225	(72452493)	+	L1ME1	LINE/L1	5380	6165	(14)	1148169
2226	23.0	5.0	5.2	chr14	50209769	50211039	(56832679)	+	L1ME3B	LINE/L1	4373	5648	(594)	1169516
861	17.1	11.4	0.4	chr14	50211087	50211327	(56832391)	+	MER33	DNA/hAT-Charlie	8	278	(46)	1169524
238	29.3	7.5	2.0	chr14	51241365	51241465	(55802253)	C	MIRb	SINE/MIR	(30)	238	132	1171169
283	21.9	2.7	0.0	chr14	51241601	51241672	(55802046)	+	FLAM_C	SINE/Alu	33	107	(26)	1171170
2454	6.2	0.3	0.0	chr14	51241849	51242137	(55801581)	+	AluSc8	SINE/Alu	1	290	(21)	1171171
6650	13.4	3.0	0.6	chr14	55510543	55511576	(51532142)	C	L1MC1	LINE/L1	(96)	6237	5176	1177837
623	21.1	9.5	0.7	chr14	58383740	58383892	(48659826)	+	L1ME4b	LINE/L1	716	883	(9)	1182140
1739	18.0	8.4	13.5	chr14	58384090	58384680	(48659038)	+	L1ME1	LINE/L1	5489	6046	(133)	1182141
2570	3.5	0.0	3.5	chr14	64983138	64983449	(42060269)	+	AluY	SINE/Alu	2	302	(9)	1192210
3278	24.4	13.6	4.8	chr14	64983450	64983712	(42060006)	C	L2a	LINE/L2	(1610)	1809	1545	1192207
15	18.6	0.0	8.6	chr14	66508442	66508499	(40535219)	+	(CTCCCGG)n	Simple_repeat	1	58	(0)	1194714
1986	21.7	13.1	1.0	chr14	70417283	70417906	(36625812)	C	MER67C	LTR/ERV1	(0)	711	1	1201181
1271	16.7	3.6	4.0	chr14	73950752	73951003	(33092715)	C	L1MB8	LINE/L1	(653)	5531	5276	1207447
1970	13.0	1.0	0.3	chr14	73951004	73951295	(33092423)	C	AluJb	SINE/Alu	(18)	294	1	1207454
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
1617	15.6	0.0	0.4	chr14	95354958	95355227	(11688491)	+	L1PB4	LINE/L1	5887	6155	(1)	1242850
1732	25.6	3.4	2.9	chr14	95355228	95355288	(11688430)	+	L1MEc	LINE/L1	3344	3409	(2910)	1242845
231	29.5	8.0	2.1	chr14	95355288	95355429	(11688289)	C	L1MEf	LINE/L1	(5901)	408	258	1242839
301	31.1	4.0	0.0	chr14	95355473	95355591	(11688127)	C	Tigger15a	DNA/TcMar-Tigger	(415)	300	177	1242851
28	27.1	3.5	5.4	chr14	96038096	96038256	(11005462)	+	GA-rich	Low_complexity	1	157	(0)	1244134
1799	16.6	5.5	0.9	chr14	99877017	99877362	(7166356)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	3	1250775
744	24.6	2.8	0.5	chr14	99877725	99877936	(7165782)	C	MER20	DNA/hAT-Charlie	(0)	219	3	1250776
1445	14.0	3.9	0.5	chr14	99877946	99878167	(7165551)	+	MER30	DNA/hAT-Charlie	1	230	(0)	1250777
1072	21.4	1.6	0.0	chr14	102275965	102276202	(4767516)	+	L1M5	LINE/L1	5320	5561	(883)	1254526
2121	8.1	4.1	1.8	chr14	102276203	102276487	(4767231)	+	AluY	SINE/Alu	1	292	(19)	1254540
2219	12.1	0.0	2.2	chr14	102519006	102519318	(4524400)	+	AluSx1	SINE/Alu	1	306	(6)	1255070
1641	13.7	0.0	7.0	chr14	102519319	102519490	(4524228)	+	AluJb	SINE/Alu	134	305	(7)	1255069
1081	19.1	7.3	5.0	chr14	102519498	102519662	(4524056)	+	L1M5	LINE/L1	5489	5659	(520)	1255071
2028	14.3	1.6	1.6	chr14	102519663	102519970	(4523748)	C	AluJb	SINE/Alu	(4)	308	1	1255072
2069	9.5	6.3	0.7	chr14	103347883	103348166	(3695552)	+	AluSx1	SINE/Alu	1	301	(11)	1256605
247	29.9	2.2	6.3	chr14	103348167	103348233	(3695485)	+	L1M5	LINE/L1	2435	2502	(3644)	1256599
2855	21.5	4.3	6.6	chr14	103348227	103348472	(3695246)	+	L1ME2z	LINE/L1	5420	5662	(782)	1256606
2038	10.3	0.4	0.0	chr14	103348473	103348743	(3694975)	+	AluSc	SINE/Alu	1	272	(37)	1256607
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
8475	2.5	0.0	0.0	chr15	30066747	30067884	(71923305)	+	L1PA3	LINE/L1	4409	5546	(609)	1276476
2174	9.6	1.5	9.0	chr15	34102288	34102652	(67888537)	+	MER75	DNA/PiggyBac	5	341	(173)	1282291
2340	13.7	8.3	3.0	chr15	43321042	43321476	(58669713)	+	L1MC1	LINE/L1	5874	6333	(0)	1296779
762	26.6	11.7	5.8	chr15	43321481	43321940	(58669249)	+	L2a	LINE/L2	2807	3426	(0)	1296777
21	12.6	0.0	0.0	chr15	56733492	56733527	(45257662)	+	(GAG)n	Simple_repeat	1	36	(0)	1317505
12	14.1	3.0	2.9	chr15	56733745	56733777	(45257412)	+	(GCCAGG)n	Simple_repeat	1	34	(0)	1317506
1772	19.6	3.9	3.9	chr15	56734077	56734537	(45256652)	C	MER65C	LTR/ERV1	(0)	461	1	1317507
684	15.8	4.0	0.8	chr15	60349574	60349694	(41641495)	+	L1PB2	LINE/L1	6014	6138	(13)	1323642
48	30.4	2.6	0.0	chr15	60349696	60349851	(41641338)	+	GA-rich	Low_complexity	1	160	(0)	1323643
1326	34.9	11.0	1.9	chr15	62980658	62981588	(39009601)	+	L2	LINE/L2	1739	2764	(655)	1327732
44	13.7	1.6	8.5	chr15	65319137	65319247	(36671942)	+	(TCT)n	Simple_repeat	1	103	(0)	1332389
13	18.3	2.6	2.5	chr15	66386883	66386921	(35604268)	+	(TCCCC)n	Simple_repeat	1	40	(0)	1334597
12	12.2	3.7	0.0	chr15	66387261	66387287	(35603902)	+	(GCGCA)n	Simple_repeat	1	28	(0)	1334598
237	17.6	1.9	3.8	chr15	66961556	66961608	(35029581)	+	L4_A_Mam	LINE/RTE-X	507	558	(4432)	1335797
11	16.4	5.9	0.0	chr15	67138290	67138323	(34852866)	+	(GCTCTGG)n	Simple_repeat	1	36	(0)	1336139
346	36.1	6.7	0.0	chr15	67863995	67864174	(34127015)	C	MIRc	SINE/MIR	(53)	215	23	1337258
14	21.3	1.9	5.5	chr15	68306892	68306945	(33684244)	+	(CTTT)n	Simple_repeat	1	55	(0)	1338105
224	29.4	1.9	0.0	chr15	68637217	68637267	(33353922)	C	MIR3	SINE/MIR	(45)	163	112	1338733
328	29.5	9.2	1.4	chr15	68637477	68637617	(33353572)	C	MIR	SINE/MIR	(33)	229	77	1338734
17	5.0	0.0	0.0	chr15	68843881	68843901	(33147288)	+	(CA)n	Simple_repeat	1	21	(0)	1339162
326	28.1	15.4	1.3	chr15	68844089	68844288	(33146901)	C	LTR33B	LTR/ERVL	(284)	219	24	1339163
814	32.8	6.0	5.8	chr15	68864003	68864504	(33126685)	C	L1MEb	LINE/L1	(5543)	593	91	1339194
2167	20.8	9.0	3.9	chr15	69485417	69485976	(32505213)	C	L1ME1	LINE/L1	(110)	6069	5479	1340318
661	32.8	8.9	6.6	chr15	69486214	69486351	(32504838)	+	L2a	LINE/L2	3032	3163	(224)	1340319
5823	15.7	2.7	2.0	chr15	70599414	70600622	(31390567)	+	L1MC1	LINE/L1	4633	5863	(470)	1342444
345	29.4	1.6	10.2	chr15	77597754	77598032	(24393157)	C	L2c	LINE/L2	(186)	3189	2931	1354324
347	26.6	12.6	0.0	chr15	78809803	78809941	(23181248)	+	MIRb	SINE/MIR	103	261	(7)	1356624
350	30.0	0.0	0.0	chr15	78850858	78850947	(23140242)	+	MIRb	SINE/MIR	35	124	(144)	1356727
186	28.7	4.7	4.7	chr15	78850888	78850993	(23140196)	C	L3b	LINE/CR1	(48)	5184	5079	1356728
239	35.8	5.0	3.6	chr15	78851288	78851426	(23139763)	C	MIR3	SINE/MIR	(15)	193	53	1356729
324	29.8	1.8	10.1	chr15	78851427	78851605	(23139584)	C	MamRep4096	DNA/hAT-Tip100	(0)	426	263	1356730
2429	17.6	4.5	2.0	chr15	78851664	78851829	(23139360)	C	L1MB8	LINE/L1	(1)	6183	5964	1356731
15	12.7	6.4	4.0	chr15	81000953	81000999	(20990190)	+	(CGGCGG)n	Simple_repeat	1	50	(0)	1360519
101	5.2	4.9	0.0	chr15	81878199	81878340	(20112849)	+	(CT)n	Simple_repeat	1	149	(0)	1361954
945	20.5	0.5	5.4	chr15	83322788	83323009	(18668180)	+	L1ME3	LINE/L1	5952	6162	(0)	1364420
3515	19.1	5.0	1.9	chr15	85128509	85128978	(16862211)	+	L1MEf	LINE/L1	5285	5767	(852)	1367286
7519	17.9	8.2	0.9	chr15	85129015	85129946	(16861243)	C	L1M4	LINE/L1	(2249)	4492	3478	1367289
3428	15.7	3.9	3.1	chr15	88949808	88950062	(13041127)	+	MER39B	LTR/ERV1	4	262	(391)	1373310
486	28.5	16.7	1.0	chr15	89087535	89087736	(12903453)	C	MIR	SINE/MIR	(3)	259	20	1373630
7052	25.4	12.7	1.8	chr15	89586399	89589443	(12401746)	C	L2a	LINE/L2	(0)	3426	2	1374525
462	10.3	0.0	0.0	chr15	92843795	92843852	(9147337)	+	MER1B	DNA/hAT-Charlie	279	336	(3)	1380597
2563	4.8	0.0	1.9	chr15	92844195	92844503	(9146686)	C	AluY	SINE/Alu	(8)	303	1	1380598
18	4.7	0.0	0.0	chr15	92900204	92900225	(9090964)	+	(TC)n	Simple_repeat	1	22	(0)	1380713
14	11.5	0.0	3.3	chr16	81484	81513	(90256832)	+	(CCTGG)n	Simple_repeat	1	30	(0)	1394145
1157	17.5	0.0	6.3	chr16	605073	605235	(89733110)	+	AluJo	SINE/Alu	143	293	(19)	1395004
458	24.3	0.1	1.5	chr16	605236	605371	(89732974)	C	L1ME2	LINE/L1	(601)	5578	5447	1395002
296	24.3	5.5	1.9	chr16	605342	605446	(89732899)	C	L1ME2z	LINE/L1	(0)	6334	6226	1395006
312	32.4	7.5	0.5	chr16	605503	605921	(89732424)	C	L1ME2z	LINE/L1	(483)	5961	5505	1395006
1660	24.4	3.3	7.5	chr16	755862	756634	(89581711)	C	L1ME1	LINE/L1	(73)	6111	5402	1395171
293	19.4	4.0	0.0	chr16	1025186	1025257	(89313088)	C	MER2	DNA/TcMar-Tigger	(3)	342	268	1395420
35	23.7	3.6	3.5	chr16	1763788	1763924	(88574421)	+	G-rich	Low_complexity	1	142	(0)	1396368
277	28.4	14.3	2.3	chr16	1923362	1923506	(88414839)	+	L2b	LINE/L2	3237	3387	(0)	1396653
18	4.5	0.0	0.0	chr16	1923510	1923532	(88414813)	+	(TG)n	Simple_repeat	1	23	(0)	1396654
446	33.9	14.6	2.1	chr16	1982934	1983460	(88354885)	+	L2b	LINE/L2	2772	3375	(0)	1396743
3322	16.6	9.9	3.5	chr16	2946624	2947467	(87390878)	+	L1MB8	LINE/L1	5274	6177	(1)	1398221
196	22.2	8.2	0.0	chr16	9134688	9134732	(81203613)	+	MIR	SINE/MIR	213	261	(1)	1410644
53	0.0	0.0	0.0	chr16	10581968	10582012	(79756333)	+	(TG)n	Simple_repeat	1	45	(0)	1413759
543	25.9	12.4	5.4	chr16	10582218	10582441	(79755904)	C	MIRb	SINE/MIR	(14)	254	13	1413760
919	25.3	3.0	1.1	chr16	10582477	10582739	(79755606)	C	MER113	DNA/hAT-Charlie	(44)	477	210	1413761
2085	11.1	11.4	1.5	chr16	10766611	10766948	(79571397)	C	MER51B	LTR/ERV1	(1)	376	1	1414169
864	30.0	11.6	1.3	chr16	10939158	10939681	(79398664)	+	L2b	LINE/L2	2615	3201	(225)	1414607
516	29.3	4.7	3.0	chr16	11326889	11327057	(79011288)	C	MIR	SINE/MIR	(70)	192	21	1415423
209	26.6	7.6	4.8	chr16	11327083	11327248	(79011097)	C	L2b	LINE/L2	(284)	3091	2921	1415424
237	27.5	7.1	1.1	chr16	11327348	11327439	(79010906)	+	L2b	LINE/L2	2503	2600	(819)	1415425
2095	13.5	1.1	0.0	chr16	14480660	14480940	(75857405)	+	AluSz6	SINE/Alu	2	285	(27)	1422245
38	0.0	0.0	2.5	chr16	14480941	14480980	(75857365)	+	(AAAT)n	Simple_repeat	1	40	(0)	1422246
2551	24.1	8.5	5.4	chr16	14480981	14481637	(75856708)	+	L1ME2	LINE/L1	5653	6329	(8)	1422232
1146	22.9	12.0	9.1	chr16	14956778	14957013	(75381332)	+	MLT1C	LTR/ERVL-MaLR	214	467	(0)	1423298
1081	19.7	11.6	0.4	chr16	14957216	14957444	(75380901)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	248	1423301
1361	18.5	0.9	0.0	chr16	14957462	14957683	(75380662)	C	AluJr	SINE/Alu	(13)	299	76	1423302
284	22.4	0.0	0.0	chr16	14957906	14957974	(75380371)	+	L1MB7	LINE/L1	5898	5966	(212)	1423303
1789	17.6	0.0	0.0	chr16	21567496	21567768	(68770577)	C	AluSz	SINE/Alu	(38)	274	2	1438164
333	33.3	2.7	13.3	chr16	21567837	21568130	(68770215)	+	L2c	LINE/L2	3088	3349	(38)	1438165
574	27.3	0.9	7.7	chr16	23250993	23251264	(67087081)	+	MLT1J	LTR/ERVL-MaLR	31	318	(194)	1441778
2062	13.2	1.4	0.7	chr16	23251587	23251600	(67086745)	C	AluSz	SINE/Alu	(15)	297	285	1441779
27	3.4	0.0	0.0	chr16	23251601	23251630	(67086715)	+	(TTAT)n	Simple_repeat	1	30	(0)	1441780
2062	13.2	1.4	0.7	chr16	23251631	23251910	(67086435)	C	AluSz	SINE/Alu	(28)	284	1	1441779
862	23.1	13.4	2.9	chr16	30598185	30598429	(59739916)	C	LTR40c	LTR/ERVL	(1)	464	190	1458437
751	16.0	0.0	6.4	chr16	30598425	30598451	(59739894)	C	FLAM_C	SINE/Alu	(2)	131	112	1458438
2254	11.4	0.3	0.0	chr16	30598452	30598758	(59739587)	+	AluSq2	SINE/Alu	1	308	(5)	1458439
13	22.4	0.0	4.4	chr16	30650822	30650866	(59687479)	+	G-rich	Low_complexity	1	45	(0)	1458569
258	38.0	10.4	5.4	chr16	30660702	30661093	(59677252)	C	L2c	LINE/L2	(64)	3323	2910	1458578
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
764	27.6	13.0	2.2	chr16	57142078	57142580	(33195765)	C	L2b	LINE/L2	(0)	3375	2827	1484452
2416	7.8	0.3	0.0	chr16	67736167	67736460	(22601885)	C	AluSp	SINE/Alu	(18)	295	1	1502253
1636	23.4	5.7	0.5	chr16	69375010	69375405	(20962940)	C	L1ME1	LINE/L1	(268)	6309	5892	1505662
780	15.3	1.6	1.6	chr16	69375417	69375540	(20962805)	+	AluJb	SINE/Alu	1	124	(188)	1505663
307	11.5	5.5	0.0	chr16	69375541	69375592	(20962753)	C	L1MA8	LINE/L1	(15)	6276	6222	1505664
522	30.1	10.6	0.0	chr16	70582420	70582605	(19755740)	+	MIRb	SINE/MIR	12	219	(49)	1508296
321	28.1	6.8	0.0	chr16	81395978	81396073	(8942272)	C	MIRb	SINE/MIR	(162)	106	4	1527155
499	21.1	5.2	0.0	chr16	81396292	81396400	(8941945)	+	MLT1D	LTR/ERVL-MaLR	41	155	(350)	1527156
978	16.1	4.3	3.5	chr16	81396405	81396636	(8941709)	C	MSTB1	LTR/ERVL-MaLR	(4)	428	195	1527157
77	29.6	3.0	5.7	chr16	84618272	84618768	(5719577)	+	(CCTCTC)n	Simple_repeat	1	512	(0)	1533213
21	21.1	5.6	2.0	chr16	85329823	85329952	(5008393)	+	G-rich	Low_complexity	1	134	(0)	1534647
2382	20.8	3.6	0.7	chr16	86209836	86210440	(4127905)	C	L1MB5	LINE/L1	(8)	6166	5512	1536249
1353	19.5	10.5	1.1	chr16	89704742	89705018	(633327)	C	AluJo	SINE/Alu	(5)	307	2	1541703
2231	11.1	0.0	0.3	chr16	89996984	89997280	(341065)	+	AluSz	SINE/Alu	1	296	(16)	1542218
2336	11.7	0.0	0.0	chr16	89997582	89997890	(340455)	C	AluSq	SINE/Alu	(4)	309	1	1542219
2430	8.1	0.7	0.0	chr17	2828059	2828366	(80429075)	+	AluSz	SINE/Alu	1	310	(2)	1550049
271	26.1	5.1	5.1	chr17	2828430	2828546	(80428895)	C	L2a	LINE/L2	(284)	3142	3026	1550047
2383	7.7	1.0	0.3	chr17	2828985	2829283	(80428158)	C	AluSx1	SINE/Alu	(11)	301	1	1550050
763	26.4	4.8	4.0	chr17	3049536	3049784	(80207657)	C	ORSL-2a	DNA/hAT-Tip100	(84)	258	8	1550499
12	11.2	3.2	3.1	chr17	3559922	3559952	(79697489)	+	A-rich	Low_complexity	1	32	(0)	1551258
15	0.0	0.0	0.0	chr17	3560032	3560048	(79697393)	+	(AC)n	Simple_repeat	1	17	(0)	1551259
3901	18.3	2.4	4.8	chr17	3560050	3560425	(79697016)	+	L1MC1	LINE/L1	5413	5777	(556)	1551260
501	24.5	10.1	5.3	chr17	4190025	4190164	(79067277)	C	MER20	DNA/hAT-Charlie	(0)	219	64	1552489
293	34.1	5.8	3.2	chr17	4702903	4703087	(78554354)	C	L2	LINE/L2	(713)	2706	2517	1553573
404	30.9	8.6	4.6	chr17	4703068	4703391	(78554050)	+	L2b	LINE/L2	2851	3180	(195)	1553576
284	27.8	1.3	0.0	chr17	4703424	4703513	(78553928)	+	L2b	LINE/L2	3298	3423	(3)	1553576
16	18.6	6.1	0.0	chr17	7614616	7614664	(75642777)	+	(CCGGAG)n	Simple_repeat	1	52	(0)	1559152
41	33.8	1.1	2.1	chr17	7614701	7614891	(75642550)	+	(GCC)n	Simple_repeat	1	193	(0)	1559153
800	14.8	0.0	0.0	chr17	7956121	7956235	(75301206)	+	AluJr	SINE/Alu	2	116	(196)	1559801
2199	12.4	2.1	0.0	chr17	7956597	7956927	(75300514)	C	L1PA14	LINE/L1	(1)	6160	5823	1559802
3368	26.6	10.9	4.8	chr17	8138308	8138688	(75118753)	C	L2a	LINE/L2	(1677)	1742	1320	1560160
779	1.2	0.0	0.0	chr17	8138878	8138962	(75118479)	C	tRNA-Ser-TCG	tRNA	(0)	85	1	1560170
13	0.0	14.3	0.0	chr17	8139020	8139047	(75118394)	+	(CCGGCT)n	Simple_repeat	1	32	(0)	1560171
1741	7.1	0.0	0.0	chr17	16536523	16536734	(66720707)	+	AluSx4	SINE/Alu	89	300	(10)	1575179
5326	23.1	6.8	2.2	chr17	17110377	17111141	(66146300)	+	L1MC3	LINE/L1	6974	7782	(3)	1576081
21	10.7	0.0	0.0	chr17	17111146	17111175	(66146266)	+	(A)n	Simple_repeat	1	30	(0)	1576083
24	0.0	0.0	0.0	chr17	17111226	17111251	(66146190)	+	(A)n	Simple_repeat	1	26	(0)	1576083
2302	9.6	0.0	0.0	chr17	17292835	17293141	(65964300)	C	AluY	SINE/Alu	(0)	311	1	1576373
2717	22.1	3.7	5.0	chr17	17293142	17293418	(65964023)	C	L1ME1	LINE/L1	(579)	5600	5335	1576369
707	19.8	0.0	0.0	chr17	17659038	17659163	(65598278)	+	FLAM_A	SINE/Alu	4	129	(13)	1577091
5674	14.2	4.5	1.8	chr17	17659164	17659411	(65598030)	+	L1MC1	LINE/L1	5335	5586	(747)	1577090
1374	20.6	2.4	8.5	chr17	17659412	17659810	(65597631)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	1577092
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
2725	22.7	7.6	2.9	chr17	28089122	28090058	(55167383)	C	L1ME1	LINE/L1	(63)	6116	5133	1588064
1907	18.4	9.9	17.5	chr17	28090083	28090581	(55166860)	C	L1MEc	LINE/L1	(4213)	2187	1660	1588065
290	27.3	16.9	8.6	chr17	30986850	30986989	(52270452)	+	MIRb	SINE/MIR	101	254	(14)	1593757
2152	13.3	0.0	1.0	chr17	30987232	30987531	(52269910)	C	AluSx1	SINE/Alu	(15)	297	1	1593758
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
303	30.3	6.7	0.9	chr17	36855539	36855782	(46401659)	C	L2c	LINE/L2	(153)	3234	2966	1604791
14	16.1	0.0	0.0	chr17	36855818	36855846	(46401595)	+	(CTTT)n	Simple_repeat	1	29	(0)	1604795
2262	12.0	0.3	1.3	chr17	36855849	36855874	(46401567)	C	AluSc8	SINE/Alu	(5)	306	284	1604796
27	0.0	0.0	3.3	chr17	36855875	36855904	(46401537)	+	(TATT)n	Simple_repeat	1	30	(0)	1604797
2262	12.0	0.3	1.3	chr17	36855905	36856186	(46401255)	C	AluSc8	SINE/Alu	(28)	283	1	1604796
701	22.1	18.7	2.7	chr17	38613702	38613920	(44643521)	+	MER5C1	DNA/hAT-Charlie	1	262	(1)	1608180
31	2.9	2.9	0.0	chr17	38614030	38614064	(44643377)	+	(CA)n	Simple_repeat	1	36	(0)	1608181
266	34.0	0.7	4.1	chr17	38614066	38614212	(44643229)	+	L2c	LINE/L2	3022	3163	(224)	1608182
13	15.8	2.7	2.6	chr17	42276584	42276620	(40980821)	+	(GGTGCC)n	Simple_repeat	1	38	(0)	1615286
252	27.9	12.3	3.1	chr17	42660804	42660899	(40596542)	C	L2c	LINE/L2	(4)	3383	3278	1616104
12	8.1	8.9	6.1	chr17	42981304	42981348	(40276093)	+	(GTGA)n	Simple_repeat	1	49	(0)	1616806
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
3266	20.3	8.2	1.4	chr17	44998994	44999933	(38257508)	C	L1ME1	LINE/L1	(10)	6169	5172	1621140
1876	27.2	8.7	10.1	chr17	45141036	45141405	(38116036)	C	L1MC5a	LINE/L1	(216)	2561	2148	1621424
233	27.4	3.1	1.6	chr17	46160070	46160132	(37097309)	+	MIR	SINE/MIR	82	145	(117)	1623481
12	31.3	0.0	0.0	chr17	47324096	47324142	(35933299)	+	G-rich	Low_complexity	1	47	(0)	1625797
2831	20.0	8.4	1.6	chr17	48205473	48206200	(35051241)	+	HAL1	LINE/L1	1251	2032	(475)	1627461
1192	15.3	6.2	3.0	chr17	48206218	48206419	(35051022)	C	MER21B	LTR/ERVL	(352)	516	308	1627462
800	17.6	0.7	0.7	chr17	48540194	48540342	(34717099)	C	MER5A1	DNA/hAT-Charlie	(0)	166	18	1628075
404	20.6	15.6	6.4	chr17	48779116	48779245	(34478196)	+	L1ME2z	LINE/L1	5325	5483	(681)	1628469
1061	9.8	0.0	0.0	chr17	48779247	48779378	(34478063)	+	AluSz6	SINE/Alu	176	307	(5)	1628472
2131	22.6	4.2	8.1	chr17	48779379	48780094	(34477347)	+	L1ME2z	LINE/L1	5481	6167	(277)	1628469
570	34.9	9.4	1.1	chr17	50821675	50821921	(32435520)	C	MamGyp-int	LTR/Gypsy	(333)	4770	4501	1632534
418	27.6	13.5	0.6	chr17	50821936	50822103	(32435338)	+	L2b	LINE/L2	2966	3158	(217)	1632526
1117	24.6	6.1	11.6	chr17	55173718	55174242	(28083199)	C	MLT1D	LTR/ERVL-MaLR	(7)	498	5	1639172
1669	16.0	3.3	0.8	chr17	55174243	55174620	(28082821)	C	L1MD2	LINE/L1	(577)	5602	5219	1639171
376	34.1	14.9	5.6	chr17	55365520	55365665	(27891776)	C	L2	LINE/L2	(2916)	503	336	1639496
15	19.1	5.3	3.3	chr17	58084143	58084199	(25173242)	+	(GGCC)n	Simple_repeat	1	60	(0)	1644418
3053	21.4	8.8	4.3	chr17	61091878	61092899	(22164542)	C	L1ME3	LINE/L1	(1)	6161	5078	1650496
2656	24.3	6.7	6.7	chr17	63175556	63176523	(20080918)	+	L1ME1	LINE/L1	4998	5965	(214)	1654370
9934	18.4	6.0	9.4	chr17	72226224	72226664	(11030777)	C	L1MC3	LINE/L1	(32)	7753	7331	1670021
385	25.8	9.1	0.0	chr17	73358449	73358568	(9898873)	+	MIRc	SINE/MIR	11	142	(126)	1672151
12	10.8	6.7	0.0	chr17	74923268	74923297	(8334144)	+	G-rich	Low_complexity	1	32	(0)	1675003
2527	6.2	0.0	0.3	chr17	75426771	75427075	(7830366)	C	AluY	SINE/Alu	(7)	304	1	1676106
6180	17.4	12.6	3.6	chr17	76177146	76178643	(7078798)	+	MER52D	LTR/ERV1	471	2123	(0)	1677507
496	29.7	18.6	4.0	chr17	76519378	76519773	(6737668)	+	L2	LINE/L2	2151	2617	(802)	1678196
21	19.0	0.0	0.0	chr17	77320871	77320908	(5936533)	+	(GT)n	Simple_repeat	1	38	(0)	1679876
2395	9.8	0.0	0.0	chr17	79074167	79074472	(4182969)	C	AluSx	SINE/Alu	(6)	306	1	1682965
237	36.3	2.9	5.6	chr17	79074490	79074632	(4182809)	+	MIR3	SINE/MIR	34	172	(36)	1682966
20	12.7	0.0	6.1	chr17	79074731	79074784	(4182657)	+	(CGCCC)n	Simple_repeat	1	50	(0)	1682967
2342	23.4	4.9	6.2	chr17	79960791	79961579	(3295862)	+	L1ME1	LINE/L1	5270	5905	(274)	1684214
2261	11.8	0.0	0.3	chr17	79961580	79961893	(3295548)	+	AluSq	SINE/Alu	1	313	(0)	1684216
15	17.6	4.1	3.9	chr17	81120414	81120462	(2136979)	+	(CTC)n	Simple_repeat	1	51	(0)	1685873
298	32.5	9.3	2.7	chr17	81221380	81221600	(2035841)	+	L2	LINE/L2	2797	3033	(386)	1686006
819	21.4	3.4	0.1	chr17	81801003	81801255	(1456186)	C	MER31A	LTR/ERV1	(46)	420	155	1686746
240	24.3	2.8	0.0	chr17	81801264	81801333	(1456108)	C	MER31A	LTR/ERV1	(257)	228	157	1686747
298	24.1	2.2	0.0	chr17	81801403	81801489	(1455952)	C	MER31A	LTR/ERV1	(240)	245	157	1686748
279	23.8	2.4	0.0	chr17	81801488	81801567	(1455874)	C	MER31B	LTR/ERV1	(230)	236	155	1686749
382	16.2	2.4	0.0	chr17	81801566	81801645	(1455796)	C	MER31B	LTR/ERV1	(230)	236	155	1686749
357	17.5	2.4	0.0	chr17	81801644	81801723	(1455718)	C	MER31A	LTR/ERV1	(247)	238	157	1686750
1028	15.1	8.4	0.0	chr17	81801722	81801939	(1455502)	C	MER31A	LTR/ERV1	(247)	238	1	1686751
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
2510	6.0	0.0	0.3	chr17	82745812	82746112	(511329)	+	AluY	SINE/Alu	1	300	(11)	1688184
2970	24.4	5.9	4.7	chr17	82746113	82746518	(510923)	C	L1ME1	LINE/L1	(593)	5586	5165	1688182
2294	8.1	0.3	1.4	chr17	82746519	82746814	(510627)	+	AluSq2	SINE/Alu	1	293	(20)	1688185
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
293	29.9	10.4	6.3	chr18	22451854	22452028	(57921257)	C	MIR	SINE/MIR	(67)	195	13	1714579
28	5.9	0.0	0.0	chr18	22452394	22452429	(57920856)	+	(CCCTC)n	Simple_repeat	1	36	(0)	1714580
4669	15.2	3.5	3.1	chr18	35405012	35406508	(44966777)	+	L1MB2	LINE/L1	4664	6171	(0)	1733272
219	21.4	0.0	13.8	chr18	35584561	35584589	(44788696)	C	L2b	LINE/L2	(1)	3374	3350	1733555
2113	14.9	1.2	2.6	chr18	35584590	35584933	(44788352)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	1733556
1215	15.8	0.0	0.0	chr18	35959532	35959702	(44413583)	+	AluJb	SINE/Alu	134	304	(8)	1734040
2106	21.1	5.1	9.8	chr18	35959706	35960423	(44412862)	+	L1ME2z	LINE/L1	5479	6161	(283)	1734035
1669	16.7	5.0	3.0	chr18	39800102	39800435	(40572850)	C	MER61A	LTR/ERV1	(0)	341	1	1739189
585	24.5	5.3	0.6	chr18	46657933	46658092	(33715193)	C	MER5B	DNA/hAT-Charlie	(10)	168	1	1749023
222	23.2	4.4	14.8	chr18	46658098	46658198	(33715087)	C	UCON132b	DNA/hAT-Tip100	(58)	90	1	1749024
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
1965	8.0	0.0	0.0	chr19	1142450	1142688	(57474928)	+	AluSx	SINE/Alu	53	291	(21)	1798282
96	49.1	3.2	0.0	chr19	2418298	2419197	(56198419)	+	(TCTC)n	Simple_repeat	1	929	(0)	1800765
2324	10.2	0.0	0.0	chr19	2419199	2419501	(56198115)	C	AluSg	SINE/Alu	(7)	303	1	1800766
1328	18.3	0.0	4.6	chr19	6245869	6246108	(52371508)	+	AluSp	SINE/Alu	85	313	(0)	1809743
3168	27.5	10.9	7.6	chr19	6246124	6247673	(52369943)	+	L1MC4a	LINE/L1	5477	7227	(655)	1809744
317	32.5	5.5	6.1	chr19	10864496	10864823	(47752793)	C	L2b	LINE/L2	(528)	2891	2566	1820864
240	27.2	3.6	0.0	chr19	10864884	10864964	(47752652)	C	L2b	LINE/L2	(1020)	2399	2316	1820864
2270	9.2	1.7	0.0	chr19	12732597	12732889	(45884727)	C	AluSx	SINE/Alu	(14)	298	1	1825101
1757	24.5	10.6	3.2	chr19	18481675	18482308	(40135308)	C	L1ME2z	LINE/L1	(558)	5886	5197	1838937
1738	12.7	0.0	3.4	chr19	32608670	32608937	(26008679)	+	AluSx	SINE/Alu	1	259	(53)	1855133
1100	10.3	0.0	0.7	chr19	32608938	32609083	(26008533)	C	AluSz6	SINE/Alu	(83)	229	85	1855134
242	7.5	0.0	0.0	chr19	32609084	32609123	(26008493)	+	Alu	SINE/Alu	259	298	(3)	1855135
2077	23.9	4.5	9.3	chr19	32609129	32609874	(26007742)	+	L1ME1	LINE/L1	5488	6173	(0)	1855136
2453	5.9	0.0	0.0	chr19	32708162	32708447	(25909169)	+	AluY	SINE/Alu	17	302	(9)	1855345
1000	28.8	6.6	4.2	chr19	33081373	33081885	(25535731)	C	L2a	LINE/L2	(58)	3317	2811	1856124
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
224	28.0	13.2	3.5	chr19	39505490	39505618	(19111998)	+	MIRb	SINE/MIR	28	172	(96)	1869222
515	15.5	1.0	4.9	chr19	39505625	39505726	(19111890)	C	L2a	LINE/L2	(16)	3410	3313	1869223
538	22.0	15.2	1.7	chr19	39505730	39505905	(19111711)	C	L2c	LINE/L2	(395)	3024	2821	1869221
2344	8.3	0.0	0.3	chr19	39505929	39506241	(19111375)	+	AluSx1	SINE/Alu	1	312	(0)	1869224
2015	12.5	0.0	7.9	chr19	40638888	40639215	(17978401)	+	AluSz	SINE/Alu	1	302	(10)	1871583
913	28.1	9.7	7.2	chr19	40639216	40639425	(17978191)	+	L2a	LINE/L2	2639	2862	(557)	1871572
1448	15.2	11.6	0.7	chr19	40639426	40639694	(17977922)	C	AluJb	SINE/Alu	(10)	302	1	1871584
1131	20.3	1.5	0.3	chr19	43156276	43156522	(15461094)	+	L1M5	LINE/L1	5419	5665	(577)	1876313
960	19.7	4.5	0.5	chr19	43347446	43347676	(15269940)	+	L1M5	LINE/L1	5423	5657	(676)	1876556
14	24.0	0.0	0.0	chr19	45933786	45933824	(12683792)	+	G-rich	Low_complexity	1	39	(0)	1882618
13	4.8	0.0	4.2	chr19	45933873	45933896	(12683720)	+	(GGGT)n	Simple_repeat	1	24	(0)	1882619
221	25.4	8.7	0.0	chr19	45934148	45934210	(12683406)	C	MIR3	SINE/MIR	(31)	177	109	1882620
2489	8.7	0.0	0.0	chr19	46419850	46420159	(12197457)	+	AluY	SINE/Alu	1	310	(1)	1883615
867	22.9	8.8	1.5	chr19	46420198	46420469	(12197147)	+	MLT1D	LTR/ERVL-MaLR	191	505	(0)	1883616
2150	12.4	1.0	0.0	chr19	46420655	46420953	(12196663)	C	AluSz	SINE/Alu	(10)	302	1	1883617
2735	23.1	6.4	0.9	chr19	48181109	48181848	(10435768)	C	L1ME3A	LINE/L1	(7)	6166	5384	1888138
282	24.8	7.0	4.2	chr19	48181865	48182009	(10435607)	+	L1ME3C	LINE/L1	5988	6095	(28)	1888139
231	25.9	0.0	0.0	chr19	48375898	48375951	(10241665)	C	MER91A	DNA/hAT-Tip100	(46)	150	97	1888607
14	23.5	0.0	5.5	chr19	48376004	48376058	(10241558)	+	(CCCAG)n	Simple_repeat	1	55	(0)	1888608
228	35.2	0.0	0.9	chr19	50786359	50786464	(7831152)	C	L2	LINE/L2	(512)	2907	2803	1894343
723	16.3	1.6	3.1	chr19	50786532	50786660	(7830956)	+	AluJb	SINE/Alu	185	311	(1)	1894344
14	6.8	11.5	5.2	chr2	287932	287983	(241905546)	+	(GCGGAG)n	Simple_repeat	1	58	(0)	1911120
13	9.3	0.0	0.0	chr2	288132	288154	(241905375)	+	(CCCG)n	Simple_repeat	1	23	(0)	1911121
12	20.1	0.0	2.8	chr2	10722783	10722818	(231470711)	+	(TTCTGT)n	Simple_repeat	1	36	(0)	1925332
2976	21.5	6.7	1.6	chr2	20066974	20067649	(222125880)	C	L1ME1	LINE/L1	(12)	6167	5451	1939699
2618	9.9	8.2	0.5	chr2	20067650	20068044	(222125485)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1939700
603	22.2	17.8	1.9	chr2	27663086	27663255	(214530274)	C	MIR	SINE/MIR	(54)	208	2	1952208
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
6069	14.6	2.6	2.8	chr2	33407682	33408857	(208784672)	C	L1MC2	LINE/L1	(0)	6344	5170	1961910
1640	23.4	12.0	1.3	chr2	33408840	33409514	(208784015)	C	L1M5	LINE/L1	(1478)	4668	3912	1961909
296	21.1	4.7	5.2	chr2	36533905	36534751	(205658778)	+	GA-rich	Low_complexity	1	842	(0)	1966166
1698	15.9	5.6	2.7	chr2	47213443	47213738	(194979791)	+	AluJb	SINE/Alu	2	306	(6)	1983552
4039	19.6	2.6	3.3	chr2	47213739	47214429	(194979100)	+	L1ME1	LINE/L1	5485	6179	(0)	1983545
222	36.0	1.3	1.9	chr2	54555514	54555669	(187637860)	+	L2	LINE/L2	2705	2859	(560)	1994558
885	15.5	11.4	2.3	chr2	58378894	58379127	(183814402)	C	MLT2B4	LTR/ERVL	(1)	566	214	1999706
1019	22.6	6.5	0.5	chr2	58379142	58379359	(183814170)	+	MER44D	DNA/TcMar-Tigger	2	233	(472)	1999707
1997	10.4	6.2	0.0	chr2	69821478	69821747	(172371782)	C	AluSz	SINE/Alu	(20)	292	5	2017811
2865	17.5	5.5	7.6	chr2	69821919	69822078	(172371451)	+	L1MB4	LINE/L1	5472	5602	(578)	2017812
1904	14.1	2.6	1.4	chr2	69822079	69822375	(172371154)	+	AluJb	SINE/Alu	1	301	(11)	2017813
2447	9.9	0.3	0.0	chr2	73056404	73056715	(169136814)	+	AluSp	SINE/Alu	1	313	(0)	2023026
3074	18.1	5.3	5.2	chr2	73056726	73057144	(169136385)	+	L1ME1	LINE/L1	5450	5857	(322)	2023027
22	0.0	0.0	0.0	chr2	76585772	76585795	(165607734)	+	(T)n	Simple_repeat	1	24	(0)	2028557
98	24.7	3.7	2.4	chr2	77724998	77725318	(164468211)	+	G-rich	Low_complexity	1	333	(0)	2030019
4047	10.4	7.3	0.8	chr2	84924691	84925283	(157268246)	+	MER51A	LTR/ERV1	1	634	(0)	2039687
281	24.4	0.0	8.2	chr2	84925284	84925340	(157268189)	C	MamRep1879	DNA/hAT-Tip100?	(161)	55	1	2039686
199	27.5	4.8	3.6	chr2	84925430	84925512	(157268017)	C	MamTip2	DNA/hAT-Tip100	(219)	86	3	2039688
201	24.7	4.3	11.9	chr2	84925970	84926070	(157267459)	C	MER91C	DNA/hAT-Tip100	(31)	109	17	2039689
12	7.4	10.3	0.0	chr2	85611846	85611874	(156581655)	+	(GGC)n	Simple_repeat	1	32	(0)	2041125
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
189	29.9	2.2	5.4	chr2	96305875	96305966	(145887563)	C	MIRc	SINE/MIR	(81)	187	99	2051901
1219	23.1	8.1	3.3	chr2	99178384	99178746	(143014783)	C	L2a	LINE/L2	(2)	3424	3043	2056019
267	34.2	7.5	3.9	chr2	99178737	99178891	(143014638)	+	L2	LINE/L2	2806	2966	(453)	2056016
48	25.5	2.9	4.7	chr2	108534262	108534469	(133659060)	+	(CGCCC)n	Simple_repeat	1	214	(0)	2069392
9121	17.1	2.6	1.8	chr2	112127604	112129333	(130064196)	+	L1MB7	LINE/L1	4911	6663	(19)	2074576
4875	16.9	2.7	0.1	chr2	120530677	120531672	(121661857)	+	L1MB3	LINE/L1	5148	6181	(2)	2087128
1427	23.5	1.8	0.9	chr2	138331234	138331564	(103861965)	C	L1M5	LINE/L1	(469)	5695	5362	2113287
1052	23.1	8.6	5.1	chr2	146596931	146597746	(95595783)	+	L1ME2	LINE/L1	4786	5665	(779)	2124106
1039	9.6	0.0	0.0	chr2	156882243	156882398	(85311131)	C	L1MA8	LINE/L1	(1)	6290	6135	2138040
252	25.8	12.6	0.0	chr2	156882410	156882506	(85311023)	+	MIRc	SINE/MIR	144	254	(14)	2138041
325	33.2	6.6	2.8	chr2	156882618	156882903	(85310626)	C	L2c	LINE/L2	(137)	3238	2931	2138042
2694	16.2	5.4	2.0	chr2	156882908	156883404	(85310125)	C	MLT2B2	LTR/ERVL	(0)	515	1	2138043
5239	20.9	3.0	0.6	chr2	157117653	157118050	(85075479)	+	L1ME1	LINE/L1	5041	5475	(704)	2138319
764	28.2	1.3	0.5	chr2	157118047	157118284	(85075245)	C	L1M4	LINE/L1	(473)	5711	5469	2138321
290	12.5	0.0	8.2	chr2	157118279	157118339	(85075190)	C	L1PB1	LINE/L1	(0)	6151	6096	2138322
2430	8.7	0.0	0.3	chr2	157118340	157118638	(85074891)	C	AluSc8	SINE/Alu	(13)	298	1	2138323
2669	4.3	0.7	0.0	chr2	157118659	157118961	(85074568)	C	AluY	SINE/Alu	(6)	305	1	2138324
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
16	13.2	0.0	0.0	chr2	177906142	177906166	(64287363)	+	(CT)n	Simple_repeat	1	25	(0)	2168269
28	0.0	0.0	0.0	chr2	177906178	177906204	(64287325)	+	(CACG)n	Simple_repeat	1	27	(0)	2168270
26	13.6	5.8	2.7	chr2	181891874	181891942	(60301587)	+	(CCTCCT)n	Simple_repeat	1	73	(0)	2173262
25	26.4	0.0	4.4	chr2	181891943	181891962	(60301567)	+	(CCCTCC)n	Simple_repeat	2	90	(0)	2173263
21	8.9	0.0	2.6	chr2	181892203	181892211	(60301318)	+	(CGAGGA)n	Simple_repeat	1	37	(0)	2173264
18	7.6	0.0	0.0	chr2	181892212	181892239	(60301290)	+	(AGG)n	Simple_repeat	1	28	(0)	2173265
1161	29.6	14.0	4.7	chr2	191014554	191015588	(51177941)	+	L2b	LINE/L2	2006	3156	(219)	2185231
13	29.3	0.0	0.0	chr2	199911453	199911494	(42282035)	+	(GCT)n	Simple_repeat	1	42	(0)	2197520
4957	15.8	1.2	7.4	chr2	202080823	202081543	(40111986)	C	L1MB3	LINE/L1	(2)	6181	5479	2201167
2458	7.6	0.3	0.3	chr2	202081544	202081846	(40111683)	C	AluSp	SINE/Alu	(10)	303	1	2201168
1608	19.2	1.6	3.7	chr2	203349704	203350073	(38843456)	C	L1MC1	LINE/L1	(506)	5827	5476	2203832
1670	15.1	0.8	0.0	chr2	203350091	203350329	(38843200)	C	AluSx	SINE/Alu	(24)	288	48	2203836
190	30.2	1.1	7.5	chr2	204544937	204545029	(37648500)	+	MIR3	SINE/MIR	120	206	(2)	2205784
696	27.1	11.7	0.4	chr2	204706703	204706983	(37486546)	C	MER46C	DNA/TcMar-Tigger	(21)	317	1	2205982
2298	24.0	4.0	8.4	chr2	207961987	207962713	(34230816)	+	MER21C	LTR/ERVL	124	817	(121)	2211036
237	20.4	0.0	0.0	chr2	207962879	207962922	(34230607)	C	MER103C	DNA/hAT-Charlie	(127)	170	127	2211037
20	0.0	0.0	0.0	chr2	210028404	210028425	(32165104)	+	(T)n	Simple_repeat	1	22	(0)	2213809
1708	20.0	9.8	10.7	chr2	224666611	224667135	(17526394)	C	MLT2B1	LTR/ERVL	(0)	520	1	2236335
1084	25.6	3.1	8.8	chr2	233037050	233037137	(9156392)	C	MLT1C	LTR/ERVL-MaLR	(339)	128	53	2249775
2745	24.6	4.9	4.3	chr2	233037156	233037569	(9155960)	+	L1ME3	LINE/L1	5343	5780	(382)	2249777
480	28.1	15.2	1.4	chr2	241615076	241615353	(578176)	+	L1ME3	LINE/L1	5857	6179	(0)	2261435
731	20.6	12.6	0.0	chr20	461705	461884	(63982283)	+	L1MB7	LINE/L1	5955	6160	(24)	2262990
13	18.4	5.7	3.6	chr20	462515	462567	(63981600)	+	(CCGCGGC)n	Simple_repeat	1	56	(0)	2262991
192	26.9	20.0	6.3	chr20	462725	462835	(63981332)	+	MIR	SINE/MIR	118	247	(15)	2262992
452	33.0	12.2	1.6	chr20	2806134	2806570	(61637597)	+	L2a	LINE/L2	2933	3422	(4)	2267623
1821	17.1	0.6	1.9	chr20	4899855	4900170	(59543997)	C	AluSq2	SINE/Alu	(0)	313	2	2271526
2967	24.6	2.6	6.4	chr20	12206626	12208006	(52236161)	C	L1MB1	LINE/L1	(5153)	2364	1083	2283128
377	33.1	6.1	7.1	chr20	12208105	12208468	(52235699)	C	L1MB1	LINE/L1	(5527)	1038	679	2283128
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
13	24.2	3.5	3.4	chr20	31861669	31861725	(32582442)	+	(GGCGG)n	Simple_repeat	1	59	(0)	2307039
1828	11.8	0.0	2.9	chr20	36094826	36094968	(28349199)	C	AluSz	SINE/Alu	(40)	272	137	2316833
382	30.7	3.1	7.8	chr20	41672962	41673166	(22771001)	+	HAL1	LINE/L1	27	221	(2286)	2327897
847	13.4	0.0	0.0	chr20	43449568	43449686	(20994481)	+	AluSc	SINE/Alu	181	299	(10)	2331193
556	27.4	7.2	0.0	chr20	43449776	43449954	(20994213)	C	L1ME3A	LINE/L1	(0)	6173	5981	2331194
539	19.1	7.3	0.0	chr20	43449976	43450090	(20994077)	C	L1ME3A	LINE/L1	(570)	5603	5480	2331194
836	19.5	7.2	0.0	chr20	43450333	43450486	(20993681)	C	AluJo	SINE/Alu	(10)	302	137	2331195
2232	10.9	0.0	3.1	chr20	43450510	43450831	(20993336)	C	AluSx	SINE/Alu	(0)	312	1	2331196
1002	17.4	0.0	0.0	chr20	44884925	44885079	(19559088)	C	FRAM	SINE/Alu	(21)	155	1	2334593
14	13.9	2.2	6.5	chr20	44885524	44885568	(19558599)	+	(CCCTGC)n	Simple_repeat	1	46	(0)	2334594
2198	8.8	4.8	0.3	chr20	50484910	50485204	(13958963)	C	AluSp	SINE/Alu	(4)	309	1	2347071
426	18.5	3.1	3.0	chr20	50485222	50485343	(13958824)	+	L1ME1	LINE/L1	5445	5563	(737)	2347072
890	13.1	0.0	0.8	chr20	50485344	50485362	(13958805)	C	AluSz6	SINE/Alu	(7)	305	287	2347073
85	7.3	0.8	0.8	chr20	50485363	50485481	(13958686)	+	(TTTC)n	Simple_repeat	1	120	(0)	2347074
890	13.1	0.0	0.8	chr20	50485482	50485591	(13958576)	C	AluSz6	SINE/Alu	(26)	286	177	2347073
1930	23.5	1.7	9.5	chr20	50485596	50485681	(13958486)	+	L1ME1	LINE/L1	5557	5632	(547)	2347072
326	29.0	5.2	4.5	chr20	50791106	50791271	(13652896)	C	MER5A	DNA/hAT-Charlie	(2)	187	7	2347743
386	27.4	1.0	1.0	chr20	51138837	51138932	(13305235)	C	MIRb	SINE/MIR	(146)	122	27	2348502
636	26.4	3.1	6.1	chr20	51139190	51139202	(13304965)	C	MER58A	DNA/hAT-Charlie	(0)	224	212	2348503
13	13.1	0.0	0.0	chr20	52370746	52370770	(12073397)	+	(TCCC)n	Simple_repeat	1	25	(0)	2351368
272	28.0	1.8	5.3	chr20	52370778	52370890	(12073277)	C	L2a	LINE/L2	(1)	3425	3317	2351369
3736	20.1	5.0	1.5	chr20	58526056	58527029	(5917138)	C	L1ME1	LINE/L1	(0)	6354	5344	2363078
402	27.8	3.6	4.7	chr20	58763975	58764144	(5680023)	+	L1MC5a	LINE/L1	2366	2533	(244)	2363425
1600	22.4	2.2	9.3	chr20	61230734	61231215	(3212952)	+	L1M5	LINE/L1	5331	5777	(402)	2367114
206	30.7	13.8	1.2	chr20	61331199	61331363	(3112804)	+	L2a	LINE/L2	2653	2841	(578)	2367236
705	30.5	10.7	0.0	chr20	62436413	62436704	(2007463)	C	L1M4	LINE/L1	(396)	5778	5452	2368565
339	27.1	5.4	0.0	chr20	62436711	62436832	(2007335)	C	MIRc	SINE/MIR	(122)	146	10	2368566
206	25.8	8.2	2.2	chr20	64120719	64120741	(323426)	C	L2c	LINE/L2	(41)	3346	3325	2370518
2711	10.7	8.2	0.0	chr20	64120742	64121134	(323033)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2370519
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
1046	29.2	12.0	8.2	chr21	25801280	25802192	(20907791)	+	L1MEi	LINE/L1	106	1057	(1223)	2393047
13	24.9	0.0	0.0	chr21	31872631	31872668	(14837315)	+	(CCAT)n	Simple_repeat	1	38	(0)	2402247
12	16.6	4.5	4.3	chr21	31872932	31872975	(14837008)	+	(CTCCGCCA)n	Simple_repeat	1	46	(0)	2402248
1084	23.8	5.0	8.6	chr21	34203578	34204146	(12505837)	C	L2a	LINE/L2	(0)	3426	2866	2406268
1142	16.5	8.0	2.7	chr21	39367632	39367983	(7342000)	+	L1MC	LINE/L1	5163	5527	(652)	2414453
2281	9.7	0.3	0.7	chr21	39367998	39368297	(7341686)	C	AluSx1	SINE/Alu	(13)	299	1	2414454
2233	10.2	0.0	0.0	chr21	42884375	42884658	(3825325)	+	AluSg	SINE/Alu	9	292	(18)	2419490
495	20.8	0.0	0.0	chr21	42884661	42884766	(3825217)	C	L1MB7	LINE/L1	(576)	5598	5493	2419488
2103	14.7	0.3	0.0	chr21	42884767	42885073	(3824910)	C	AluSz	SINE/Alu	(2)	310	3	2419491
37	23.7	3.5	3.4	chr21	46324510	46324674	(385309)	+	G-rich	Low_complexity	1	165	(0)	2423812
12	7.5	6.7	3.1	chr21	46324785	46324814	(385169)	+	(GCGCGG)n	Simple_repeat	1	32	(0)	2423813
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
2882	1.9	0.0	0.0	chr22	17856604	17856920	(32961548)	C	AluYb8	SINE/Alu	(1)	317	1	2429823
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
12	25.6	2.1	2.0	chr22	20160393	20160440	(30658028)	+	(GGCGTGA)n	Simple_repeat	1	49	(0)	2432970
1153	11.0	0.7	0.0	chr22	20338381	20338535	(30479933)	+	AluYm1	SINE/Alu	13	168	(143)	2433146
51	2.3	11.4	0.0	chr22	20338573	20338660	(30479808)	+	(AT)n	Simple_repeat	1	98	(0)	2433147
4938	1.6	0.2	0.0	chr22	20338666	20339226	(30479242)	+	HSATI	Satellite	6	567	(10)	2433148
374	23.4	13.8	5.8	chr22	23750232	23750403	(27068065)	+	MER102a	DNA/hAT-Charlie	1	188	(142)	2438890
2133	9.2	5.5	0.3	chr22	23751785	23752078	(27066390)	+	AluSg	SINE/Alu	1	310	(0)	2438893
280	31.0	9.8	3.8	chr22	24713563	24713800	(26104668)	C	L2b	LINE/L2	(204)	3171	2918	2440516
2298	11.7	0.0	0.0	chr22	24713884	24714182	(26104286)	C	AluSg4	SINE/Alu	(11)	299	1	2440517
1729	11.3	11.4	0.8	chr22	30628213	30628477	(20189991)	+	AluSx	SINE/Alu	1	297	(15)	2453048
18	7.9	3.7	0.0	chr22	31055534	31055560	(19762908)	+	(AC)n	Simple_repeat	1	28	(0)	2453899
314	27.8	5.8	5.6	chr22	31055967	31056105	(19762363)	+	MIRb	SINE/MIR	17	160	(108)	2453900
630	31.1	1.6	8.3	chr22	31298883	31299148	(19519320)	C	L2c	LINE/L2	(1)	3386	3139	2454461
655	33.9	17.1	4.2	chr22	31299166	31299504	(19518964)	C	L2c	LINE/L2	(338)	3081	2408	2454461
16	7.0	3.1	3.0	chr22	32378634	32378665	(18439803)	+	(GGAGCT)n	Simple_repeat	1	33	(0)	2456833
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
378	23.0	11.9	2.6	chr22	36126145	36126296	(14692172)	C	MIRc	SINE/MIR	(84)	184	17	2464442
252	33.3	3.3	1.1	chr22	37067707	37067794	(13750674)	+	MER5B	DNA/hAT-Charlie	89	178	(0)	2466439
460	30.5	14.1	2.1	chr22	37067865	37068239	(13750229)	+	L2b	LINE/L2	2949	3375	(0)	2466440
2382	10.2	0.0	0.0	chr22	39163211	39163514	(11654954)	C	AluSp	SINE/Alu	(9)	304	1	2471027
1308	20.1	3.3	2.1	chr22	39163523	39163840	(11654628)	C	L1M5	LINE/L1	(578)	5601	5278	2471028
2230	11.3	0.0	0.3	chr22	39186155	39186447	(11632021)	+	AluSz	SINE/Alu	1	292	(20)	2471076
2231	18.9	5.0	1.0	chr22	39186448	39186828	(11631640)	+	L1ME3A	LINE/L1	5367	5767	(395)	2471075
1910	19.9	7.8	0.0	chr22	40631926	40632291	(10186177)	+	MLT1F	LTR/ERVL-MaLR	1	397	(151)	2473963
2235	12.1	0.0	0.0	chr22	40723112	40723416	(10095052)	+	AluSq	SINE/Alu	1	305	(8)	2474202
13	25.5	3.9	0.0	chr22	40723739	40723789	(10094679)	+	(GAGGAAT)n	Simple_repeat	1	53	(0)	2474203
917	16.5	5.7	2.9	chr22	42243624	42243829	(8574639)	+	L1MC2	LINE/L1	6133	6344	(0)	2477636
665	16.4	1.4	0.8	chr22	42243832	42243966	(8574502)	+	L1MB5	LINE/L1	5405	5545	(644)	2477639
1206	17.9	1.4	1.0	chr22	42243980	42244186	(8574282)	+	AluSz	SINE/Alu	58	265	(47)	2477640
3117	15.7	5.4	1.0	chr22	42244189	42244793	(8573675)	+	L1MB5	LINE/L1	5542	6174	(0)	2477639
2274	8.5	2.0	0.3	chr22	42857684	42857978	(7960490)	C	AluSx	SINE/Alu	(11)	301	2	2479093
373	31.1	0.0	5.0	chr22	42858267	42858405	(7960063)	+	MIRb	SINE/MIR	2	133	(135)	2479094
2133	11.4	0.0	0.3	chr22	42858421	42858710	(7959758)	+	AluJb	SINE/Alu	14	302	(10)	2479095
1917	15.9	1.9	1.0	chr22	43536560	43536868	(7281600)	+	AluSz	SINE/Alu	1	312	(0)	2480405
413	18.8	5.9	0.0	chr22	44935729	44935808	(5882660)	+	MIRb	SINE/MIR	91	175	(93)	2482918
3394	21.6	4.4	5.6	chr22	46203944	46204858	(4613610)	C	L1ME1	LINE/L1	(124)	6228	5338	2485183
3801	17.2	2.9	1.6	chr22	46213013	46213396	(4605072)	C	L1MC3	LINE/L1	(2078)	5707	5321	2485200
1399	21.3	4.5	5.9	chr3	27265239	27265579	(171029980)	C	L1MD	LINE/L1	(480)	5699	5364	2535814
599	16.4	2.8	0.0	chr3	27265580	27265683	(171029876)	C	U6	snRNA	(0)	107	1	2535815
1399	22.1	4.9	5.7	chr3	27265684	27265802	(171029757)	C	L1MD	LINE/L1	(779)	5367	5240	2535814
357	30.1	14.2	5.1	chr3	28933051	28933285	(169362274)	+	LTR33A_	LTR/ERVL	39	298	(233)	2538493
491	24.1	15.7	1.2	chr3	28933294	28933461	(169362098)	C	MER3	DNA/hAT-Charlie	(12)	197	1	2538494
2490	22.1	7.4	1.1	chr3	33718641	33719298	(164576261)	C	L1ME2	LINE/L1	(18)	6146	5444	2546320
205	28.6	21.7	0.0	chr3	33719365	33719483	(164576076)	+	L2a	LINE/L2	3275	3426	(0)	2546321
12	21.8	0.0	8.8	chr3	33719490	33719546	(164576013)	+	A-rich	Low_complexity	1	57	(0)	2546322
21	9.7	4.1	3.9	chr3	43286102	43286153	(155009406)	+	(TATGTA)n	Simple_repeat	1	52	(0)	2560421
13	4.5	0.0	7.4	chr3	43286331	43286357	(155009202)	+	(TCC)n	Simple_repeat	1	27	(0)	2560422
16	12.7	0.0	5.3	chr3	43286463	43286500	(155009059)	+	(CGCCC)n	Simple_repeat	1	38	(0)	2560423
216	32.6	5.8	3.0	chr3	45018595	45018727	(153276832)	+	L3	LINE/CR1	3423	3559	(540)	2563057
670	20.4	8.2	4.5	chr3	48217322	48217407	(150078152)	+	MER3	DNA/hAT-Charlie	128	208	(1)	2568959
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
11209	10.7	3.3	5.2	chr3	75774068	75774610	(122520949)	+	MER57-int	LTR/ERV1	4349	4903	(2634)	2614695
1079	28.2	8.3	2.0	chr3	97048716	97049324	(101246235)	C	L2a	LINE/L2	(62)	3364	2731	2637325
254	29.5	2.8	1.9	chr3	99812207	99812313	(98483246)	+	L2	LINE/L2	1618	1725	(1694)	2640744
351	28.6	12.3	1.1	chr3	99812337	99812516	(98483043)	+	L2	LINE/L2	2099	2301	(1118)	2640744
438	30.5	17.7	0.4	chr3	99812518	99812774	(98482785)	+	L2	LINE/L2	2655	2965	(454)	2640744
11	18.1	2.4	4.8	chr3	105366741	105366781	(92928778)	+	G-rich	Low_complexity	1	42	(0)	2648180
20	28.7	2.8	0.0	chr3	105366924	105366995	(92928564)	+	(CCG)n	Simple_repeat	1	74	(0)	2648181
418	25.7	4.8	10.9	chr3	122633103	122633303	(75662256)	+	L2c	LINE/L2	3200	3387	(0)	2672363
1517	15.4	3.8	11.2	chr3	122633409	122633782	(75661777)	+	MER2	DNA/TcMar-Tigger	1	345	(0)	2672364
13	17.8	5.3	0.0	chr3	126213108	126213145	(72082414)	+	(CCCCT)n	Simple_repeat	1	40	(0)	2678260
255	37.5	8.7	2.9	chr3	126522004	126522283	(71773276)	+	L2c	LINE/L2	3090	3387	(0)	2678721
343	24.3	5.0	2.8	chr3	126522715	126522892	(71772667)	C	MER113	DNA/hAT-Charlie	(32)	489	308	2678723
258	36.3	3.5	9.5	chr3	126703553	126703890	(71591669)	+	L2b	LINE/L2	3058	3374	(1)	2678968
304	29.9	16.9	1.1	chr3	128618271	128618449	(69677110)	C	MIR	SINE/MIR	(29)	233	21	2682054
12	15.6	3.5	0.0	chr3	130894668	130894696	(67400863)	+	(CTC)n	Simple_repeat	1	30	(0)	2686150
744	29.7	8.9	4.9	chr3	133425357	133425788	(64869771)	C	LTR78	LTR/ERV1	(3)	1301	851	2689871
13	35.3	2.6	5.0	chr3	133425795	133425910	(64869649)	+	A-rich	Low_complexity	1	119	(0)	2689872
97	16.2	5.4	0.4	chr3	133425911	133425943	(64869616)	+	GA-rich	Low_complexity	18	122	(113)	2689873
18	23.0	0.0	0.0	chr3	133425944	133425980	(64869579)	+	G-rich	Low_complexity	1	37	(0)	2689874
97	16.2	5.4	0.4	chr3	133425981	133426011	(64869548)	+	GA-rich	Low_complexity	123	235	(0)	2689873
430	33.5	0.7	0.7	chr3	133426012	133426161	(64869398)	C	LTR78	LTR/ERV1	(421)	883	734	2689871
606	28.6	10.8	2.7	chr3	138915037	138915334	(59380225)	+	L2a	LINE/L2	3094	3418	(8)	2698509
182	25.8	9.6	1.5	chr3	138915350	138915416	(59380143)	C	L2a	LINE/L2	(47)	3379	3307	2698510
239	30.0	2.2	2.2	chr3	150721937	150722028	(47573531)	+	L2c	LINE/L2	3256	3347	(40)	2715730
2061	11.6	0.3	3.9	chr3	160031966	160032303	(38263256)	C	AluSx1	SINE/Alu	(0)	312	1	2729153
2248	9.4	0.0	1.9	chr3	179653926	179654232	(18641327)	+	AluSx1	SINE/Alu	1	301	(11)	2756627
17	26.7	0.0	4.4	chr3	188947990	188948057	(9347502)	+	(CCGCC)n	Simple_repeat	1	68	(0)	2772772
1117	14.5	4.8	0.0	chr3	196811387	196811545	(1484014)	C	AluSx	SINE/Alu	(9)	303	137	2785807
5871	14.1	4.5	2.4	chr4	1071380	1072583	(189141972)	+	L1MC1	LINE/L1	5126	6333	(0)	2789829
213	33.7	15.5	1.0	chr4	7802403	7802501	(182412054)	C	MIR3	SINE/MIR	(14)	194	79	2800690
2305	6.4	0.0	3.0	chr4	7802633	7802928	(182411627)	C	AluY	SINE/Alu	(4)	307	21	2800691
205	29.2	0.9	7.4	chr4	18022764	18022885	(172191670)	+	L2a	LINE/L2	3309	3422	(4)	2817245
384	31.7	2.9	7.0	chr4	38601532	38601745	(151612810)	+	L2c	LINE/L2	3183	3387	(0)	2848069
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
313	24.2	5.9	3.1	chr4	52722896	52722993	(137491562)	C	MIR	SINE/MIR	(70)	192	92	2866637
3844	15.2	4.1	1.6	chr4	56012454	56013587	(134200968)	C	L1MB3	LINE/L1	(1)	6170	4932	2871851
28	3.3	0.0	0.0	chr4	104491308	104491338	(85723217)	+	(GCC)n	Simple_repeat	1	31	(0)	2938264
26	10.6	0.0	0.0	chr4	104491354	104491394	(85723161)	+	(GAG)n	Simple_repeat	1	41	(0)	2938265
50	15.2	0.0	0.0	chr4	104491401	104491487	(85723068)	+	(GCC)n	Simple_repeat	1	87	(0)	2938266
24	24.1	1.2	4.7	chr4	104491497	104491581	(85722974)	+	(GGC)n	Simple_repeat	1	86	(0)	2938267
870	26.4	19.7	3.6	chr4	123389525	123390064	(66824491)	+	L2a	LINE/L2	2792	3426	(0)	2963896
1932	28.8	4.9	1.9	chr4	134853881	134854835	(55359720)	+	L1ME1	LINE/L1	4963	6168	(11)	2978601
1677	23.6	6.5	3.7	chr4	150782301	150782789	(39431766)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	2	3000245
12	5.5	0.0	0.0	chr4	169271019	169271037	(20943518)	+	(CGC)n	Simple_repeat	1	19	(0)	3026073
15	8.1	0.0	3.6	chr4	169271052	169271079	(20943476)	+	(AGG)n	Simple_repeat	1	28	(0)	3026074
13	13.2	6.1	0.0	chr4	170026518	170026550	(20188005)	+	G-rich	Low_complexity	1	35	(0)	3027259
3825	16.4	8.2	6.6	chr4	175856264	175857053	(14357502)	C	LTR1E	LTR/ERV1	(0)	804	1	3034743
830	19.9	10.6	2.6	chr4	175857054	175857179	(14357376)	+	L1MC3	LINE/L1	7660	7764	(21)	3034742
1487	14.7	0.0	0.0	chr4	186188087	186188284	(4026271)	+	AluJb	SINE/Alu	86	283	(29)	3049326
39	0.0	0.0	0.0	chr4	186188288	186188323	(4026232)	+	(AATA)n	Simple_repeat	1	36	(0)	3049327
1344	23.6	3.0	3.8	chr4	186188346	186188745	(4025810)	+	L1ME3	LINE/L1	5454	5850	(312)	3049317
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
626	22.7	6.6	5.3	chr5	1821441	1821649	(179716610)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	256	3056686
853	21.8	9.7	0.4	chr5	1822143	1822386	(179715873)	C	MLT1C	LTR/ERVL-MaLR	(193)	274	6	3056686
649	26.4	8.3	0.7	chr5	41843227	41843510	(139694749)	C	L1M5	LINE/L1	(1529)	4617	4310	3110905
334	32.0	4.8	7.8	chr5	51722328	51722520	(129815739)	+	HAL1	LINE/L1	39	225	(2282)	3118097
8055	17.2	3.9	1.0	chr5	51722521	51724378	(129813881)	C	L1MC	LINE/L1	(706)	5627	3713	3118098
17	8.6	5.1	2.4	chr5	59127601	59127639	(122410620)	+	(CCCCACC)n	Simple_repeat	1	41	(0)	3129093
44	0.0	0.0	0.0	chr5	59128016	59128053	(122410206)	+	(GT)n	Simple_repeat	1	38	(0)	3129094
2317	17.9	1.6	0.5	chr5	73029533	73029953	(108508306)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3149887
1694	14.7	0.3	8.7	chr5	77985880	77986213	(103552046)	C	AluJb	SINE/Alu	(6)	306	1	3157486
12	18.9	0.0	7.1	chr5	79236030	79236071	(102302188)	+	(CGC)n	Simple_repeat	1	42	(0)	3159397
2550	6.3	0.3	0.0	chr5	79611683	79611982	(101926277)	C	AluSg	SINE/Alu	(9)	301	1	3160093
31	21.7	0.0	0.0	chr5	79612336	79612399	(101925860)	+	G-rich	Low_complexity	1	64	(0)	3160094
12	25.7	0.0	0.0	chr5	81852392	81852428	(99685831)	+	G-rich	Low_complexity	1	37	(0)	3163720
250	35.8	11.8	1.5	chr5	87411990	87412193	(94126066)	+	L2	LINE/L2	2683	2910	(509)	3171095
19	17.6	4.2	5.4	chr5	91383382	91383387	(90154872)	+	(GCGCC)n	Simple_repeat	1	24	(50)	3176169
12	24.6	3.6	3.5	chr5	91383388	91383443	(90154816)	+	(GCC)n	Simple_repeat	1	58	(0)	3176170
19	17.6	4.2	5.4	chr5	91383444	91383452	(90154807)	+	(GCGCC)n	Simple_repeat	25	74	(0)	3176169
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
4338	12.6	1.4	2.4	chr5	106535765	106535989	(75002270)	C	L1PA13	LINE/L1	(508)	5655	5437	3195260
14	9.3	0.0	0.0	chr5	107672098	107672120	(73866139)	+	(GCA)n	Simple_repeat	1	23	(0)	3196632
2215	13.3	0.0	1.3	chr5	124797176	124797475	(56740784)	C	AluSx3	SINE/Alu	(15)	296	1	3219159
3207	21.2	17.8	0.6	chr5	124797476	124798142	(56740117)	+	LTR28B	LTR/ERV1	156	973	(1)	3219158
2461	7.8	0.0	0.0	chr5	132288196	132288490	(49249769)	C	AluSg7	SINE/Alu	(14)	295	1	3229142
283	23.8	9.0	2.9	chr5	134466208	134466311	(47071948)	+	MamTip2	DNA/hAT-Tip100	108	218	(87)	3232624
282	32.9	11.0	6.8	chr5	136082676	136083216	(45455043)	+	L2b	LINE/L2	2800	3375	(0)	3235186
290	24.3	12.7	0.0	chr5	139775515	139775617	(41762642)	C	MIRb	SINE/MIR	(141)	127	10	3241497
3084	19.9	11.2	4.2	chr5	139939575	139940560	(41597699)	+	L1ME1	LINE/L1	5266	6351	(1)	3241739
561	30.5	4.4	10.4	chr5	140557796	140558132	(40980127)	+	L2b	LINE/L2	3055	3370	(5)	3242820
5681	9.4	4.3	1.1	chr5	140626852	140627724	(40910535)	C	MER41-int	LTR/ERV1	(3943)	4177	2721	3242949
1354	24.2	5.6	2.4	chr5	150454718	150455193	(31083066)	C	L2a	LINE/L2	(315)	3111	2623	3259979
21	0.0	0.0	0.0	chr5	157731111	157731133	(23807126)	+	(T)n	Simple_repeat	1	23	(0)	3273267
13	16.9	0.0	8.5	chr5	157731251	157731297	(23806962)	+	GA-rich	Low_complexity	1	47	(0)	3273268
2361	20.4	10.1	3.2	chr5	160755958	160756696	(20781563)	C	L1ME1	LINE/L1	(58)	6121	5327	3278723
6527	11.2	0.3	0.3	chr5	161925793	161926715	(19611544)	+	THE1B-int	LTR/ERVL-MaLR	657	1579	(1)	3280407
13	21.0	5.9	1.9	chr5	172283505	172283555	(9254704)	+	G-rich	Low_complexity	1	54	(0)	3297091
2035	13.6	0.0	1.9	chr5	173307324	173307640	(8230619)	+	AluSz	SINE/Alu	2	312	(0)	3299393
2760	23.0	5.5	6.0	chr5	173307641	173307921	(8230338)	C	L1ME3	LINE/L1	(575)	5587	5318	3299392
227	29.4	12.9	7.7	chr5	177607799	177608111	(3930148)	C	MLT1K	LTR/ERVL-MaLR	(139)	456	125	3307722
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
2819	22.2	4.4	0.4	chr5	179203673	179204370	(2333889)	+	L1MB3	LINE/L1	5454	6180	(3)	3310494
258	29.6	1.2	0.0	chr5	180837758	180837838	(700421)	+	L4_B_Mam	LINE/RTE-X	4208	4289	(652)	3313330
462	5.5	0.0	0.0	chr6	685874	685928	(170120051)	C	AluSc	SINE/Alu	(10)	299	245	3315102
2305	6.6	3.1	0.7	chr6	685976	686261	(170119718)	C	AluSc5	SINE/Alu	(16)	293	1	3315103
9622	18.6	2.2	4.2	chr6	3036968	3038797	(167767182)	+	MER83A-int	LTR/ERV1	22	1815	(2470)	3318302
4489	17.0	7.0	6.8	chr6	3066540	3067722	(167738257)	C	L1MC2	LINE/L1	(1)	6343	5171	3318346
4569	24.5	10.7	2.1	chr6	3666644	3669482	(167136497)	+	L1M5	LINE/L1	2401	5528	(636)	3319258
188	30.8	14.4	2.8	chr6	3669564	3669611	(167136368)	C	MIR	SINE/MIR	(57)	205	147	3319259
46	2.2	0.0	0.0	chr6	3669612	3669657	(167136322)	+	(TAT)n	Simple_repeat	1	46	(0)	3319260
188	30.8	14.4	2.8	chr6	3669658	3669785	(167136194)	C	MIR	SINE/MIR	(116)	146	6	3319259
20	0.0	0.0	0.0	chr6	7543394	7543415	(163262564)	+	(T)n	Simple_repeat	1	22	(0)	3325358
18	24.2	7.3	0.0	chr6	11044334	11044417	(159761562)	+	(CG)n	Simple_repeat	1	90	(0)	3330624
672	29.9	5.7	0.0	chr6	12004025	12004238	(158801741)	C	MIR	SINE/MIR	(28)	234	8	3332059
2363	10.4	0.0	1.3	chr6	13447455	13447770	(157358209)	+	AluSx1	SINE/Alu	1	312	(0)	3334274
307	31.6	10.0	6.7	chr6	18410374	18410671	(152395308)	C	L2c	LINE/L2	(162)	3225	2917	3343028
8623	17.4	3.6	3.5	chr6	20687825	20689588	(150116391)	C	L1MC1	LINE/L1	(4728)	1780	1	3346466
5049	16.6	4.0	0.9	chr6	24181496	24183328	(146622651)	+	L1MB3	LINE/L1	4296	6183	(0)	3351523
511	4.0	0.0	17.8	chr6	26577104	26577193	(144228786)	+	tRNA-Tyr-TAC	tRNA	1	74	(2)	3355507
477	16.1	10.4	0.0	chr6	28659392	28659493	(142146486)	+	MLT1A	LTR/ERVL-MaLR	274	455	(2)	3358986
6497	14.1	1.9	2.9	chr6	28674762	28675999	(142129980)	+	L1MC1	LINE/L1	5098	6321	(12)	3359019
53735	7.2	0.7	0.6	chr6	28684224	28687381	(142118598)	+	HERVK-int	LTR/ERVK	722	3909	(3627)	3359034
231	31.9	5.3	0.0	chr6	29721474	29721545	(141084434)	C	L2	LINE/L2	(553)	2866	2791	3360568
207	15.9	8.3	0.0	chr6	29924777	29924820	(140881159)	C	L2c	LINE/L2	(0)	3387	3340	3360834
214	28.4	13.8	0.0	chr6	29924870	29924950	(140881029)	C	L2	LINE/L2	(553)	2866	2773	3360835
210	27.6	12.5	2.0	chr6	29941115	29941214	(140864765)	C	L2	LINE/L2	(553)	2866	2755	3360860
1787	8.1	17.1	0.0	chr6	32244682	32244929	(138561050)	C	AluSz	SINE/Alu	(10)	302	4	3364623
307	18.6	0.3	0.6	chr6	32245305	32245377	(138560602)	C	Charlie7a	DNA/hAT-Charlie	(4)	268	197	3364624
686	28.3	5.4	3.8	chr6	33618032	33618162	(137187817)	+	L1ME3Cz	LINE/L1	854	989	(8)	3366860
336	20.2	18.6	1.8	chr6	33618368	33618478	(137187501)	C	MIRb	SINE/MIR	(102)	166	33	3366863
2418	8.6	0.0	0.3	chr6	33618479	33618780	(137187199)	+	AluSc	SINE/Alu	1	301	(8)	3366864
18	7.0	0.0	5.9	chr6	34236747	34236780	(136569199)	+	(GCG)n	Simple_repeat	1	34	(0)	3367935
12	17.6	0.0	5.6	chr6	34237135	34237170	(136568809)	+	(GCG)n	Simple_repeat	1	36	(0)	3367936
346	24.5	5.1	9.5	chr6	36441359	36441540	(134364439)	+	MLT1J1	LTR/ERVL-MaLR	19	192	(219)	3372525
13	28.9	6.0	0.0	chr6	37614820	37614886	(133191093)	+	(CTC)n	Simple_repeat	1	71	(0)	3375003
1943	18.8	10.2	3.1	chr6	38011049	38011536	(132794443)	C	L1ME1	LINE/L1	(236)	5943	5417	3375774
18	7.0	0.0	3.1	chr6	38011537	38011568	(132794411)	+	(TTAATT)n	Simple_repeat	1	32	(0)	3375777
12	22.6	2.3	2.3	chr6	38011569	38011579	(132794400)	+	(TTAGTT)n	Simple_repeat	1	44	(0)	3375778
17	8.6	8.1	0.0	chr6	41941725	41941761	(128864218)	+	(GGCGCT)n	Simple_repeat	1	40	(0)	3382130
15	10.4	3.0	2.9	chr6	41941767	41941799	(128864180)	+	(CCCG)n	Simple_repeat	1	34	(0)	3382131
12	10.0	0.0	0.0	chr6	41942103	41942124	(128863855)	+	(TCAT)n	Simple_repeat	1	22	(0)	3382132
2265	9.5	1.0	0.0	chr6	73523145	73523439	(97282540)	+	AluSz	SINE/Alu	1	298	(14)	3423646
11	24.8	2.0	3.9	chr6	78868176	78868226	(91937753)	+	A-rich	Low_complexity	1	52	(0)	3430496
209	33.8	4.7	3.4	chr6	109999822	109999968	(60806011)	+	L2c	LINE/L2	2996	3144	(243)	3473002
20	33.8	0.9	3.5	chr6	116279178	116279291	(54526688)	+	(TCC)n	Simple_repeat	1	115	(0)	3482344
15	12.8	2.8	2.7	chr6	116279371	116279406	(54526573)	+	(CCTCAG)n	Simple_repeat	1	37	(0)	3482345
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
2400	17.9	10.3	0.6	chr6	124856588	124857053	(45948926)	+	MLT2B1	LTR/ERVL	5	520	(0)	3493489
267	31.8	1.1	0.0	chr6	125986855	125986942	(44819037)	C	L2c	LINE/L2	(38)	3349	3261	3495121
15	8.8	0.0	0.0	chr6	127515788	127515811	(43290168)	+	(GCC)n	Simple_repeat	1	24	(0)	3496998
14	33.6	1.5	0.0	chr6	127516059	127516125	(43289854)	+	(CCCCCT)n	Simple_repeat	1	68	(0)	3496999
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
389	31.9	14.7	6.7	chr6	147120029	147120283	(23685696)	C	MamSINE1	SINE/tRNA-RTE	(10)	280	2	3524966
8132	19.9	2.5	6.8	chr6	150424149	150425983	(20379996)	+	MER52A	LTR/ERV1	1	1755	(0)	3530193
2305	7.4	3.9	0.0	chr6	151406352	151406649	(19399330)	C	AluY	SINE/Alu	(1)	310	1	3531944
474	29.1	0.0	4.5	chr6	155582852	155582984	(15222995)	+	MIR	SINE/MIR	95	221	(41)	3538314
2262	11.9	0.3	0.0	chr6	155583092	155583394	(15222585)	C	AluSp	SINE/Alu	(8)	305	2	3538315
11	20.2	2.9	0.0	chr6	157774111	157774144	(13031835)	+	(AGAGGC)n	Simple_repeat	1	35	(0)	3541445
40	1.8	1.6	6.2	chr6	157774218	157774280	(13031699)	+	(GGAGTGGA)n	Simple_repeat	1	64	(0)	3541446
220	33.9	11.5	6.8	chr6	158287424	158287746	(12518233)	C	L2c	LINE/L2	(1)	3386	3047	3542297
506	26.4	13.4	5.8	chr6	158287997	158288201	(12517778)	+	MIRc	SINE/MIR	2	224	(44)	3542298
46	0.0	0.0	0.0	chr6	158342948	158342986	(12462993)	+	(TG)n	Simple_repeat	1	39	(0)	3542380
195	33.8	0.0	0.0	chr6	159688906	159688982	(11116997)	+	L2a	LINE/L2	2635	2711	(708)	3544441
505	28.7	8.1	1.4	chr6	159689138	159689413	(11116566)	+	L2a	LINE/L2	2968	3263	(163)	3544441
618	23.4	10.7	3.2	chr6	159786170	159786359	(11019620)	+	MER6B	DNA/TcMar-Tigger	5	210	(0)	3544603
251	34.5	9.4	5.4	chr6	166613419	166613602	(4192377)	+	L2	LINE/L2	2430	2621	(798)	3553450
235	31.7	11.6	2.3	chr6	166613625	166613795	(4192184)	+	L2	LINE/L2	2720	2908	(511)	3553450
16815	10.2	5.6	0.3	chr7	146319	148890	(159197083)	C	MER57-int	LTR/ERV1	(0)	7537	4824	3558012
2109	11.3	0.6	5.2	chr7	1177723	1178049	(158167924)	C	AluSx1	SINE/Alu	(0)	312	1	3559433
2308	17.0	5.9	1.8	chr7	1178050	1178504	(158167469)	C	L1MC2	LINE/L1	(519)	5825	5351	3559434
748	18.5	2.7	13.6	chr7	1178517	1178587	(158167386)	C	L1MC2	LINE/L1	(993)	5153	5095	3559434
815	17.6	0.0	0.0	chr7	1178588	1178718	(158167255)	+	FLAM_A	SINE/Alu	1	131	(11)	3559435
1433	25.8	8.6	0.0	chr7	1417412	1417849	(157928124)	+	L1MC3	LINE/L1	7306	7784	(1)	3559879
2345	9.3	1.3	0.0	chr7	1417859	1418158	(157927815)	+	AluSx1	SINE/Alu	1	304	(8)	3559880
1996	14.3	3.3	0.0	chr7	1636824	1637117	(157708856)	+	AluJo	SINE/Alu	1	304	(8)	3560222
1407	22.3	2.7	10.3	chr7	1637118	1637554	(157708419)	+	L1M4	LINE/L1	5334	5728	(451)	3560221
4281	19.4	4.6	0.9	chr7	2188244	2189824	(157156149)	+	L1MB3	LINE/L1	4545	6183	(0)	3560896
1974	13.5	2.9	3.2	chr7	2810617	2810928	(156535045)	+	AluSq2	SINE/Alu	3	313	(0)	3562040
1682	18.8	0.7	0.3	chr7	4674072	4674364	(154671609)	C	AluJr	SINE/Alu	(14)	298	5	3565365
1422	18.9	3.3	11.5	chr7	4674365	4674562	(154671411)	C	L1MC	LINE/L1	(2477)	5565	5368	3565364
2154	10.1	3.0	3.9	chr7	4674563	4674870	(154671103)	C	AluSx1	SINE/Alu	(7)	305	1	3565366
1884	21.0	2.9	5.8	chr7	29993063	29993157	(129352816)	C	L1MEc	LINE/L1	(426)	5911	5820	3602453
570	6.5	0.0	6.1	chr7	29993158	29993239	(129352734)	+	MADE1	DNA/TcMar-Mariner	1	77	(3)	3602454
1884	21.0	2.9	5.8	chr7	29993240	29993476	(129352497)	C	L1MEc	LINE/L1	(518)	5819	5594	3602453
2160	13.8	0.0	0.0	chr7	29993477	29993772	(129352201)	C	AluSc	SINE/Alu	(13)	296	1	3602455
1750	16.3	15.3	5.3	chr7	32941627	32942100	(126403873)	+	MER34C2	LTR/ERV1	25	554	(1)	3607042
12	16.8	0.0	10.2	chr7	32943209	32943257	(126402716)	+	G-rich	Low_complexity	1	49	(0)	3607044
337	33.9	5.1	9.7	chr7	33520461	33520666	(125825307)	C	MIR1_Amn	SINE/MIR	(34)	196	1	3607980
524	32.5	3.5	1.0	chr7	33520756	33520951	(125825022)	C	L1MEg	LINE/L1	(5881)	203	3	3607981
582	22.4	5.3	0.7	chr7	36214556	36214699	(123131274)	+	MER5A	DNA/hAT-Charlie	35	185	(4)	3611921
3656	15.9	8.1	1.2	chr7	36345614	36346750	(122999223)	+	L1MB7	LINE/L1	4901	6124	(60)	3612148
2465	21.1	8.5	3.6	chr7	39241750	39242527	(120103446)	C	L1ME1	LINE/L1	(19)	6160	5341	3616260
363	22.4	2.3	1.2	chr7	44987086	44987171	(114358802)	+	MER67C	LTR/ERV1	1	87	(624)	3625282
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
2083	12.3	0.7	0.0	chr7	75005850	75006133	(84339840)	+	AluSx1	SINE/Alu	3	288	(24)	3668577
1605	18.7	2.3	5.8	chr7	75006134	75006300	(84339673)	+	AluJr	SINE/Alu	134	299	(13)	3668576
1566	25.5	4.4	12.6	chr7	75006301	75006383	(84339590)	C	L1ME1	LINE/L1	(593)	5586	5503	3668574
515	22.4	6.5	2.0	chr7	99133256	99133401	(60212572)	+	L1MD2	LINE/L1	6207	6359	(0)	3704021
2192	21.3	8.0	0.9	chr7	99133437	99133994	(60211979)	+	L1ME3A	LINE/L1	5413	6013	(160)	3704022
2378	10.4	2.5	7.1	chr7	100234701	100235082	(59110891)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3706112
2085	25.2	5.0	7.8	chr7	100235287	100235369	(59110604)	+	L1ME1	LINE/L1	5503	5586	(593)	3706113
1799	17.1	0.0	5.7	chr7	100235370	100235536	(59110437)	C	AluJr	SINE/Alu	(13)	299	134	3706114
14	11.6	0.0	3.3	chr7	100494214	100494243	(58851730)	+	(GGAA)n	Simple_repeat	1	30	(0)	3706711
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
17	10.3	0.0	5.6	chr7	107686237	107686272	(51659701)	+	(TCTT)n	Simple_repeat	1	36	(0)	3719452
79	1.1	3.1	3.0	chr7	107686401	107686498	(51659475)	+	(TCTT)n	Simple_repeat	1	101	(0)	3719453
7439	13.0	1.6	0.3	chr7	124518678	124519755	(34826218)	+	THE1D-int	LTR/ERVL-MaLR	534	1626	(5)	3741954
1117	27.5	10.4	6.3	chr7	140159563	140160023	(19185950)	+	LTR86B2	LTR/ERVL	1	482	(5)	3766789
28	0.0	0.0	0.0	chr7	140398737	140398763	(18947210)	+	(T)n	Simple_repeat	1	27	(0)	3767338
1843	14.8	2.0	0.3	chr7	140398860	140399149	(18946824)	+	AluJr	SINE/Alu	1	295	(17)	3767339
592	9.3	0.0	7.4	chr7	140506624	140506731	(18839242)	C	AluJr	SINE/Alu	(187)	125	26	3767634
196	33.9	1.7	0.0	chr7	140506967	140507025	(18838948)	+	X7C_LINE	LINE/CR1	165	224	(12)	3767635
4799	12.5	3.6	7.8	chr7	141611784	141612717	(17733256)	+	L1MC1	LINE/L1	5435	6327	(6)	3769565
13	19.0	8.3	0.0	chr7	149027905	149027952	(10318021)	+	(CCCTCT)n	Simple_repeat	1	52	(0)	3779849
206	34.7	11.7	0.0	chr7	150970114	150970234	(8375739)	C	MamTip2	DNA/hAT-Tip100	(140)	165	29	3782722
2063	29.6	15.2	2.7	chr7	151885523	151886485	(7459488)	C	L2a	LINE/L2	(523)	2896	1798	3784178
534	32.3	4.5	0.0	chr7	152382649	152382880	(6963093)	+	L1M5	LINE/L1	5480	5722	(402)	3784987
184	28.3	3.2	0.0	chr7	153957063	153957122	(5388851)	+	L3	LINE/CR1	3926	3987	(112)	3787668
354	25.4	20.3	4.7	chr7	157140946	157141246	(2204727)	C	LTR16A1	LTR/ERVL	(92)	364	5	3791939
603	30.9	2.8	2.4	chr7	157141247	157141360	(2204613)	C	L1ME3	LINE/L1	(55)	6107	5997	3791940
1170	22.1	8.9	2.5	chr7	157141361	157141685	(2204288)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	1	3791941
2428	9.9	0.0	0.0	chr7	157797977	157798288	(1547685)	+	AluSx	SINE/Alu	1	312	(0)	3792747
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
254	27.6	2.6	1.3	chr8	12975966	12976042	(132162594)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	485	3811922
1407	24.0	3.3	8.3	chr8	22236976	22237310	(122901326)	C	L2a	LINE/L2	(2)	3424	3124	3825811
28	0.0	0.0	0.0	chr8	22237311	22237337	(122901299)	+	(AACAA)n	Simple_repeat	1	27	(0)	3825812
1897	25.4	9.6	5.7	chr8	22237338	22237806	(122900830)	C	L2a	LINE/L2	(303)	3123	2563	3825811
5790	15.0	2.1	4.7	chr8	22869590	22870780	(122267856)	+	L1MC1	LINE/L1	5163	6333	(0)	3826949
817	13.2	0.0	1.8	chr8	28600805	28600918	(116537718)	+	AluJo	SINE/Alu	21	132	(180)	3836479
12	17.6	0.0	0.0	chr8	28890070	28890096	(116248540)	+	(CCTTT)n	Simple_repeat	1	27	(0)	3837024
1049	22.3	9.7	5.2	chr8	37116437	37116800	(108021836)	+	MLT2C2	LTR/ERVL	83	464	(0)	3849857
2345	12.9	7.5	0.8	chr8	37175524	37175922	(107962714)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3849942
505	31.0	7.5	7.9	chr8	37175923	37176072	(107962564)	C	MLT1J2	LTR/ERVL-MaLR	(162)	286	147	3849941
2132	11.1	0.0	0.4	chr8	37176204	37176482	(107962154)	C	AluSx4	SINE/Alu	(32)	278	1	3849943
2097	18.2	12.9	3.3	chr8	38256607	38256911	(106881725)	C	L1ME1	LINE/L1	(328)	5851	5507	3851995
1865	15.4	1.6	3.8	chr8	38256915	38257232	(106881404)	C	AluJb	SINE/Alu	(1)	311	1	3851997
2165	11.1	0.0	0.0	chr8	38257239	38257545	(106881091)	C	AluSx	SINE/Alu	(0)	312	4	3851998
285	29.2	9.8	0.0	chr8	41488689	41488835	(103649801)	+	HAL1b	LINE/L1	1535	1697	(724)	3857096
2933	20.0	5.3	3.7	chr8	41488832	41489696	(103648940)	+	L1ME1	LINE/L1	5262	6177	(2)	3857092
15	25.0	3.1	3.0	chr8	47260886	47260950	(97877686)	+	(GGCGC)n	Simple_repeat	1	67	(0)	3861679
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
1485	28.3	1.5	2.6	chr8	57214477	57215085	(87923551)	C	MER50	LTR/ERV1	(123)	611	10	3874995
17	17.8	1.9	5.7	chr8	58492541	58492592	(86646044)	+	A-rich	Low_complexity	1	53	(0)	3876664
2620	19.3	2.4	3.7	chr8	68952525	68952639	(76185997)	+	L1ME2	LINE/L1	5339	5455	(709)	3891362
1398	8.8	11.3	0.0	chr8	68952640	68952843	(76185793)	C	MER30	DNA/hAT-Charlie	(0)	230	1	3891363
2620	20.8	4.0	3.7	chr8	68952844	68953479	(76185157)	+	L1ME2	LINE/L1	5456	6138	(35)	3891362
26	0.0	0.0	0.0	chr8	69832995	69833019	(75305617)	+	(CCG)n	Simple_repeat	1	25	(0)	3892657
397	32.1	5.0	0.0	chr8	70258757	70258890	(74879746)	+	MIRb	SINE/MIR	128	268	(0)	3893520
12	20.2	0.0	6.7	chr8	78665979	78666023	(66472613)	+	(CCCCGC)n	Simple_repeat	1	45	(0)	3904970
961	13.7	0.0	0.0	chr8	80368839	80368977	(64769659)	+	MER58D	DNA/hAT-Charlie	247	385	(1)	3907624
906	32.5	4.3	1.6	chr8	80369003	80369386	(64769250)	+	L1ME2	LINE/L1	72	466	(5670)	3907625
7578	24.0	6.8	2.9	chr8	80369388	80370334	(64768302)	+	L1ME2	LINE/L1	1581	2589	(3557)	3907625
362	17.2	0.0	1.6	chr8	93893744	93893807	(51244829)	+	AluJr4	SINE/Alu	63	125	(187)	3926012
18	18.5	2.3	0.0	chr8	93893818	93893860	(51244776)	+	A-rich	Low_complexity	1	44	(0)	3926013
4166	19.6	4.7	3.7	chr8	93893926	93894456	(51244180)	+	L1ME2z	LINE/L1	5446	5983	(461)	3926014
17	15.3	0.0	0.0	chr8	100859841	100859869	(44278767)	+	A-rich	Low_complexity	1	29	(0)	3937661
24	14.5	0.0	2.1	chr8	100859919	100859966	(44278670)	+	(AATG)n	Simple_repeat	1	48	(0)	3937662
967	18.4	0.0	2.9	chr8	122676666	122676838	(22461798)	C	MER58A	DNA/hAT-Charlie	(14)	210	43	3970306
5332	10.9	2.0	0.5	chr8	122676844	122677628	(22461008)	+	L1MC1	LINE/L1	5472	6268	(65)	3970307
2863	22.7	3.0	6.3	chr8	123067694	123068436	(22070200)	+	L1ME1	LINE/L1	5040	5791	(388)	3971103
4747	10.0	1.8	4.8	chr8	123422578	123423176	(21715460)	C	L1P4	LINE/L1	(935)	5211	4623	3971830
77	14.5	4.7	6.2	chr8	123423194	123423425	(21715211)	+	(CTTC)n	Simple_repeat	1	243	(0)	3971834
638	21.9	6.1	0.0	chr8	123423445	123423567	(21715069)	C	FLAM_C	SINE/Alu	(8)	135	5	3971835
416	28.6	10.6	5.8	chr8	123423607	123423866	(21714770)	C	Charlie23a	DNA/hAT-Charlie	(15)	324	51	3971836
224	27.9	1.1	6.1	chr8	124997846	124997944	(20140692)	+	L2c	LINE/L2	3061	3154	(221)	3974744
325	25.3	0.0	2.2	chr8	124997965	124998053	(20140583)	+	L2c	LINE/L2	3300	3386	(1)	3974744
2350	8.6	0.3	0.3	chr8	139785926	139786226	(5352410)	+	AluSx1	SINE/Alu	1	301	(11)	4000885
8222	24.2	5.0	1.9	chr8	139786227	139787065	(5351571)	+	L1ME1	LINE/L1	5481	6352	(0)	4000878
3069	24.4	6.3	6.5	chr8	139986989	139987495	(5151141)	C	L1ME2z	LINE/L1	(0)	5922	5395	4001179
1227	29.2	13.0	0.8	chr8	140655725	140655915	(4482721)	+	L1ME1	LINE/L1	5185	5387	(792)	4002358
26	0.0	0.0	0.0	chr8	140655916	140655940	(4482696)	+	(AAAAC)n	Simple_repeat	1	25	(0)	4002359
1227	28.6	17.2	1.3	chr8	140655941	140656592	(4482044)	+	L1ME1	LINE/L1	5388	6176	(3)	4002358
4257	15.8	5.5	5.7	chr8	140666384	140667296	(4471340)	+	L1MB3	LINE/L1	5273	6183	(0)	4002373
357	31.8	10.5	2.4	chr8	141309188	141309395	(3829241)	+	MIR	SINE/MIR	1	224	(38)	4003446
1554	22.0	9.1	1.2	chr8	141309409	141309980	(3828656)	+	L1ME3A	LINE/L1	5471	6121	(52)	4003447
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
226	12.1	0.0	0.0	chr8	143669745	143669777	(1468859)	+	Alu	SINE/Alu	2	34	(99)	4006490
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
1767	15.6	2.4	0.0	chr8	144302546	144302827	(835809)	+	AluJo	SINE/Alu	1	289	(23)	4007432
816	24.1	14.3	0.3	chr8	144302833	144303127	(835509)	+	L1M5	LINE/L1	5314	5656	(523)	4007433
1456	29.8	12.1	3.3	chr8	144303234	144303595	(835041)	C	L1M4b	LINE/L1	(5894)	973	564	4007434
398	31.8	11.6	2.5	chr8	144488435	144488708	(649928)	C	L2	LINE/L2	(2374)	1045	744	4007677
1684	15.2	2.3	0.0	chr9	997887	998142	(137396575)	+	AluJr4	SINE/Alu	1	262	(50)	4010101
601	21.7	13.9	3.9	chr9	998153	998358	(137396359)	C	MIR	SINE/MIR	(0)	262	33	4010102
37184	19.1	1.2	2.1	chr9	6080644	6087331	(132307386)	+	HERVI-int	LTR/ERV1	1144	7769	(16)	4017508
550	32.5	13.8	3.5	chr9	18258496	18259257	(120135460)	+	L2	LINE/L2	1560	2412	(1007)	4034408
201	24.3	13.3	4.8	chr9	32573529	32573660	(105821057)	+	MIR	SINE/MIR	40	178	(90)	4053873
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
4403	13.4	4.8	1.7	chr9	69085687	69086385	(69308332)	C	MER72	LTR/ERV1	(0)	722	1	4080954
2157	10.2	1.6	2.3	chr9	83704543	83704846	(54689871)	+	AluSg	SINE/Alu	1	302	(8)	4103347
2179	22.1	9.0	8.4	chr9	83705090	83705246	(54689471)	+	L1ME2z	LINE/L1	5448	5572	(872)	4103348
2198	8.1	2.4	3.0	chr9	83705247	83705542	(54689175)	C	AluSq2	SINE/Alu	(19)	294	1	4103349
34	23.3	2.2	5.6	chr9	95317200	95317338	(43077379)	+	(CCCGCCT)n	Simple_repeat	1	142	(0)	4121018
740	30.1	8.2	0.9	chr9	96372117	96372454	(42022263)	+	L1MC5a	LINE/L1	2083	2447	(330)	4122742
757	21.4	11.4	13.4	chr9	96372471	96372574	(42022143)	+	LTR56	LTR/ERV1	9	116	(329)	4122743
2188	9.2	0.0	0.4	chr9	96372575	96372883	(42021834)	C	AluSx	SINE/Alu	(0)	312	3	4122744
192	34.2	2.5	2.5	chr9	98974888	98974968	(39419749)	+	MIR3	SINE/MIR	17	97	(111)	4127622
190	23.9	20.2	0.0	chr9	100054178	100054244	(38340473)	+	L2c	LINE/L2	3304	3387	(0)	4129480
1367	15.7	3.0	0.4	chr9	100054532	100054761	(38339956)	+	Tigger4a	DNA/TcMar-Tigger	1	236	(0)	4129481
476	26.8	6.7	6.7	chr9	105447379	105447586	(32947131)	C	MIRb	SINE/MIR	(59)	209	2	4137581
934	27.5	14.6	1.7	chr9	111524182	111524815	(26869902)	C	L2a	LINE/L2	(0)	3426	2660	4148036
13	17.8	0.0	2.9	chr9	111524913	111524946	(26869771)	+	G-rich	Low_complexity	1	34	(0)	4148037
12	28.1	1.7	3.3	chr9	111525290	111525348	(26869369)	+	G-rich	Low_complexity	1	60	(0)	4148038
14	3.7	10.7	0.0	chr9	111525365	111525392	(26869325)	+	(GCT)n	Simple_repeat	1	31	(0)	4148039
1698	31.3	9.0	4.7	chr9	112843876	112844648	(25550069)	C	L2a	LINE/L2	(506)	2913	2093	4150613
603	32.6	9.5	2.0	chr9	120731487	120731886	(17662831)	C	L2a	LINE/L2	(36)	3390	2958	4165588
18	0.0	9.7	0.0	chr9	120732311	120732341	(17662376)	+	(TCTTC)n	Simple_repeat	1	34	(0)	4165589
2026	9.9	0.0	0.8	chr9	120732366	120732627	(17662090)	C	AluSz	SINE/Alu	(52)	260	1	4165590
3068	22.3	2.6	5.0	chr9	121243878	121244560	(17150157)	C	L1ME1	LINE/L1	(52)	6127	5442	4166580
1875	22.6	20.8	3.9	chr9	121244561	121245348	(17149369)	+	L1MC5	LINE/L1	6982	7918	(1386)	4166582
2129	11.9	0.0	2.9	chr9	129238308	129238617	(9156100)	C	AluSx	SINE/Alu	(11)	301	1	4182395
475	29.0	5.2	3.4	chr9	129238625	129239032	(9155685)	C	L1MEg	LINE/L1	(6114)	972	559	4182396
3298	20.6	8.0	5.3	chr9	129870986	129871703	(8523014)	C	L1MB3	LINE/L1	(2)	6181	5438	4183818
26	0.0	3.5	0.0	chr9	129871704	129871732	(8522985)	+	(GTTTT)n	Simple_repeat	1	30	(0)	4183819
2267	8.1	0.3	0.0	chr9	129871733	129872015	(8522702)	C	AluSq2	SINE/Alu	(29)	284	1	4183820
2337	8.5	0.7	0.0	chr9	130226747	130227052	(8167665)	+	AluSg	SINE/Alu	3	310	(0)	4184608
1415	23.9	1.4	0.6	chr9	130227358	130227714	(8167003)	C	L1M5	LINE/L1	(471)	5702	5343	4184609
723	29.2	7.4	4.1	chr9	130823526	130823864	(7570853)	C	MLT1J	LTR/ERVL-MaLR	(142)	370	20	4185879
2075	19.0	6.7	6.5	chr9	130824036	130824554	(7570163)	C	MLT2B1	LTR/ERVL	(0)	520	1	4185880
633	33.7	8.0	4.4	chr9	130991851	130992235	(7402482)	C	L2b	LINE/L2	(1)	3374	2975	4186148
283	25.3	3.2	0.0	chr9	131671365	131671455	(6723262)	C	Tigger16b	DNA/TcMar-Tigger	(41)	295	202	4187458
159	26.4	0.5	1.1	chr9	134024899	134025331	(4369386)	+	(CTC)n	Simple_repeat	1	435	(0)	4191431
984	30.1	6.2	3.2	chr9	136750399	136750920	(1643797)	+	L1MC4a	LINE/L1	6202	6592	(1290)	4194750
74	15.7	1.7	5.0	chr9	136750944	136751121	(1643596)	+	GA-rich	Low_complexity	1	181	(0)	4194751
741	27.2	11.9	1.2	chr9	136751126	136751469	(1643248)	+	L1MC4a	LINE/L1	6705	7085	(957)	4194750
1391	28.3	7.4	6.8	chr9	136751529	136751809	(1642908)	C	L1M4a1	LINE/L1	(608)	1971	1689	4194752
444	16.8	1.4	0.0	chrX	39976522	39976617	(116064278)	C	L1ME3	LINE/L1	(0)	6179	6075	4421557
2748	21.3	7.0	2.8	chrX	39976647	39977306	(116063589)	+	L1ME1	LINE/L1	5413	6120	(59)	4421558
648	28.2	4.9	0.5	chrX	40173227	40173422	(115867473)	+	MIR	SINE/MIR	57	261	(1)	4421888
2229	9.7	0.0	4.5	chrX	41450856	41450985	(114589910)	C	AluSz6	SINE/Alu	(184)	128	1	4424434
969	9.6	0.0	6.8	chrX	41450987	41451132	(114589763)	C	AluSz6	SINE/Alu	(176)	136	1	4424436
2405	20.3	10.0	5.4	chrX	41451134	41451517	(114589378)	+	L1ME2	LINE/L1	5461	5911	(253)	4424437
2239	11.8	0.0	0.0	chrX	41451518	41451813	(114589082)	C	AluSz6	SINE/Alu	(16)	296	1	4424438
6597	12.0	2.7	2.9	chrX	53179342	53179491	(102861404)	+	L1MC1	LINE/L1	5181	5333	(813)	4443171
681	19.1	1.6	0.8	chrX	53179492	53179617	(102861278)	+	FLAM_A	SINE/Alu	1	127	(15)	4443174
6597	12.0	2.6	1.4	chrX	53179618	53180580	(102860315)	+	L1MC1	LINE/L1	5334	6312	(21)	4443171
263	20.5	4.3	0.7	chrX	68685673	68685747	(87355148)	+	MIR3	SINE/MIR	78	151	(79)	4456799
25	0.0	0.0	0.0	chrX	93673989	93674015	(62366880)	+	(A)n	Simple_repeat	1	27	(0)	4485920
2347	9.5	2.2	0.0	chrX	96405203	96405506	(59635389)	C	AluSq2	SINE/Alu	(2)	311	1	4489081
4984	4.3	0.2	0.0	chrX	106220921	106221522	(49819373)	+	L1PA6	LINE/L1	5551	6153	(1)	4502503
2513	26.4	3.2	7.1	chrX	106221523	106222316	(49818579)	+	L1ME1	LINE/L1	5430	6179	(0)	4502502
1747	22.2	0.7	0.7	chrX	109257151	109257571	(46783324)	C	L1ME1	LINE/L1	(266)	5913	5493	4506624
710	18.2	1.0	7.3	chrX	109257593	109257827	(46783068)	C	L1M3e	LINE/L1	(4875)	2162	1936	4506626
2889	19.6	5.6	4.6	chrX	119338457	119338858	(36702037)	C	L1ME1	LINE/L1	(260)	5919	5482	4520858
2747	21.1	10.9	0.3	chrX	119338855	119339492	(36701403)	C	L1MEc	LINE/L1	(5669)	731	18	4520860
943	13.0	0.0	0.7	chrX	119461342	119461479	(36579416)	+	AluJr	SINE/Alu	91	227	(85)	4521097
2627	20.6	4.3	4.5	chrX	119461483	119461750	(36579145)	+	L1ME1	LINE/L1	5507	5780	(399)	4521098
2853	24.0	5.8	3.3	chrX	122484634	122486341	(33554554)	+	L1ME1	LINE/L1	4400	6143	(36)	4525517
5083	16.6	3.9	1.4	chrX	123160396	123161369	(32879526)	C	L1MC1	LINE/L1	(6)	6502	5504	4526349
2047	24.3	9.6	2.7	chrX	132341769	132342249	(23698646)	+	L1ME1	LINE/L1	5083	5629	(550)	4539229
2002	11.1	4.2	0.0	chrX	132342250	132342519	(23698376)	+	AluSz6	SINE/Alu	1	282	(30)	4539236
3826	19.7	11.1	4.5	chrX	135668765	135669671	(20371224)	+	LTR28B	LTR/ERV1	1	974	(0)	4544654
21	8.7	2.7	0.0	chrX	135989890	135989926	(20050969)	+	(TTTGTT)n	Simple_repeat	1	38	(0)	4545176
423	26.2	11.9	6.5	chrX	146733318	146733640	(9307255)	C	L2a	LINE/L2	(9)	3417	3075	4560885
469	34.9	6.4	4.1	chrX	146733690	146733843	(9307052)	C	L2a	LINE/L2	(216)	3210	3045	4560886
1722	21.7	5.9	0.8	chrX	146733844	146734243	(9306652)	+	MSTB	LTR/ERVL-MaLR	1	422	(4)	4560887
247	35.8	7.3	2.5	chrX	149605565	149605839	(6435056)	+	L2	LINE/L2	2490	2778	(641)	4564832
2443	25.5	4.6	3.0	chrX	150209082	150210234	(5830661)	C	L1ME3B	LINE/L1	(334)	5908	4771	4565570
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
4091	21.0	5.7	2.4	chrY	11204203	11205457	(46021958)	+	MER52A	LTR/ERV1	1	1755	(0)	4588979