19	13.0	0.0	6.2	chr1	959305	959352	(247997070)	+	(CCGCC)n	Simple_repeat	1	48	(0)	1202
14	16.4	2.9	0.0	chr1	1163268	1163301	(247793121)	+	(GGCGGA)n	Simple_repeat	1	35	(0)	1425
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
233	22.6	3.1	0.0	chr1	2050070	2050131	(246906291)	C	MER5A	DNA/hAT-Charlie	(79)	110	47	2818
21	7.7	0.0	0.0	chr1	3320315	3320342	(245636080)	+	(TG)n	Simple_repeat	1	28	(0)	3908
235	24.1	19.4	1.8	chr1	3453096	3453205	(245503217)	+	MIR3	SINE/MIR	1	134	(74)	4013
30	13.7	1.8	0.0	chr1	3687658	3687713	(245268709)	+	(TCCCC)n	Simple_repeat	1	57	(0)	4237
13	16.5	11.1	0.0	chr1	3747455	3747508	(245208914)	+	(GGCGCGG)n	Simple_repeat	1	60	(0)	4292
2474	17.3	6.5	0.0	chr1	3800005	3800448	(245155974)	+	LTR38-int	LTR/ERV1	2	476	(1310)	4373
2014	13.2	0.5	1.8	chr1	3800435	3800865	(245155557)	+	LTR38-int	LTR/ERV1	364	689	(1097)	4373
1880	30.9	9.7	5.4	chr1	3820609	3821880	(245134542)	+	L1MC5	LINE/L1	7501	8517	(787)	4407
190	19.6	2.1	0.0	chr1	3869938	3869983	(245086439)	C	MER5B	DNA/hAT-Charlie	(0)	178	132	4481
323	26.7	1.9	0.0	chr1	3870035	3870139	(245086283)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	284	4482
217	31.2	0.8	4.7	chr1	3870534	3870655	(245085767)	C	L2b	LINE/L2	(18)	3369	3260	4483
17	25.9	5.4	0.0	chr1	6270718	6270773	(242685649)	+	(GT)n	Simple_repeat	1	59	(0)	7934
16	21.6	0.0	0.0	chr1	6963256	6963287	(241993135)	+	(C)n	Simple_repeat	1	32	(0)	9195
17	18.2	2.2	2.1	chr1	7456981	7457026	(241499396)	+	(CCTC)n	Simple_repeat	1	47	(0)	9870
12	18.3	0.0	3.0	chr1	8318276	8318308	(240638114)	+	(CCGAGA)n	Simple_repeat	1	33	(0)	11461
13	21.6	6.2	0.0	chr1	8318496	8318543	(240637879)	+	(CCTGGTCA)n	Simple_repeat	1	51	(0)	11462
2531	5.7	0.0	0.7	chr1	9804081	9804381	(239152041)	+	AluSc	SINE/Alu	1	299	(10)	14414
314	25.7	3.7	11.6	chr1	9804526	9804565	(239151857)	C	Chap1_Mam	DNA/hAT-Charlie	(115)	227	185	14415
1731	17.0	4.5	0.0	chr1	9804566	9804842	(239151580)	+	AluJb	SINE/Alu	4	293	(19)	14416
15	20.4	0.0	2.4	chr1	10475135	10475175	(238481247)	+	(GCCCC)n	Simple_repeat	1	41	(0)	15885
281	32.4	9.3	5.9	chr1	11340263	11340501	(237615921)	+	Plat_L3	LINE/CR1	3304	3551	(35)	17488
12	21.2	2.1	4.2	chr1	11434622	11434668	(237521754)	+	(CTGCCAG)n	Simple_repeat	1	48	(0)	17699
20	28.0	1.4	1.4	chr1	11650733	11650803	(237305619)	+	(CCT)n	Simple_repeat	1	72	(0)	18156
538	24.0	4.5	2.3	chr1	11700458	11700632	(237255790)	C	Charlie15b	DNA/hAT-Charlie	(845)	216	38	18265
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
257	33.9	4.4	1.8	chr1	14892116	14892226	(234064196)	+	LFSINE_Vert	SINE/tRNA	344	457	(2)	24100
261	33.0	2.1	0.0	chr1	15100686	15100776	(233855646)	+	MIRb	SINE/MIR	13	105	(163)	24541
274	33.1	6.4	1.7	chr1	15304799	15304976	(233651446)	+	MamRep564	Unknown	129	315	(42)	24981
620	24.8	10.3	4.0	chr1	15527392	15527622	(233428800)	C	MIRb	SINE/MIR	(0)	268	4	25474
15	29.2	0.0	3.4	chr1	15617497	15617555	(233338867)	+	G-rich	Low_complexity	1	59	(0)	25685
16	10.4	3.2	0.0	chr1	15617534	15617564	(233338858)	+	(GAGC)n	Simple_repeat	1	32	(0)	25686
21	13.9	0.0	2.3	chr1	15617628	15617670	(233338752)	+	G-rich	Low_complexity	1	43	(0)	25687
2536	6.6	0.0	0.0	chr1	15724203	15724504	(233231918)	+	AluSc5	SINE/Alu	1	302	(7)	25905
525	26.9	7.3	0.8	chr1	15758112	15758311	(233198111)	C	MIRb	SINE/MIR	(8)	254	33	25955
289	34.0	0.0	1.0	chr1	16056013	16056113	(232900309)	+	MIRc	SINE/MIR	18	117	(151)	26590
12	23.1	3.7	3.6	chr1	16613393	16613446	(232342976)	+	(CCGCGCC)n	Simple_repeat	1	56	(0)	27819
16	7.0	3.1	3.0	chr1	16613537	16613568	(232342854)	+	(CCTGCG)n	Simple_repeat	1	33	(0)	27820
2358	10.0	0.0	0.0	chr1	16620824	16621124	(232335298)	C	AluSc8	SINE/Alu	(10)	301	1	27833
316	18.8	7.2	0.0	chr1	16896598	16896661	(232059761)	C	MER45B	DNA/hAT-Tip100	(660)	380	312	28205
508	23.3	8.9	0.6	chr1	16896667	16896830	(232059592)	+	LTR75B	LTR/ERVL	5	183	(425)	28206
424	26.2	6.4	3.7	chr1	17012090	17012262	(231944160)	+	MIRb	SINE/MIR	25	207	(61)	28482
1300	9.5	0.6	0.0	chr1	17012264	17012431	(231943991)	+	AluSp	SINE/Alu	136	304	(9)	28483
17	17.4	7.7	0.0	chr1	17627525	17627576	(231328846)	+	(CCTGCC)n	Simple_repeat	1	56	(0)	29880
14	13.4	2.9	2.8	chr1	18199668	18199702	(230756720)	+	(CCTC)n	Simple_repeat	1	36	(0)	31148
1132	24.5	5.9	6.8	chr1	18458487	18458663	(230497759)	C	L2a	LINE/L2	(260)	3166	2987	31697
20	14.8	2.1	2.1	chr1	18725400	18725446	(230230976)	+	(CCCTCCC)n	Simple_repeat	1	48	(0)	32277
274	32.9	4.3	1.3	chr1	18934586	18934813	(230021609)	C	L1ME4a	LINE/L1	(38)	6086	5852	32728
17	12.4	2.9	0.0	chr1	19338789	19338823	(229617599)	+	(TTTCT)n	Simple_repeat	1	36	(0)	33473
22	0.0	0.0	0.0	chr1	19405542	19405565	(229550857)	+	(A)n	Simple_repeat	1	24	(0)	33571
324	36.7	5.4	0.0	chr1	19651065	19651222	(229305200)	C	MIRb	SINE/MIR	(73)	195	29	34132
28	3.3	0.0	0.0	chr1	21440113	21440143	(227516279)	+	(GCAGGC)n	Simple_repeat	1	31	(0)	37924
16	21.7	0.0	0.0	chr1	21440449	21440480	(227515942)	+	G-rich	Low_complexity	1	32	(0)	37925
14	20.5	0.0	6.0	chr1	22612823	22612872	(226343550)	+	(CCTCCC)n	Simple_repeat	1	50	(0)	40493
467	33.3	10.0	0.9	chr1	22612924	22613150	(226343272)	+	MIRb	SINE/MIR	5	254	(14)	40494
14	13.1	0.0	0.0	chr1	22614020	22614045	(226342377)	+	(GAG)n	Simple_repeat	1	26	(0)	40496
2182	9.6	0.0	5.3	chr1	22963934	22964236	(225992186)	C	AluSx1	SINE/Alu	(25)	287	1	41344
598	22.4	5.6	5.6	chr1	22964258	22964611	(225991811)	+	MLT1H2	LTR/ERVL-MaLR	108	485	(4)	41345
185	29.5	3.2	1.6	chr1	23187484	23187545	(225768877)	+	MIR3	SINE/MIR	146	208	(0)	41811
262	30.9	2.9	0.0	chr1	23187905	23187972	(225768450)	+	MER102c	DNA/hAT-Charlie	1	70	(261)	41817
40	2.6	0.0	0.0	chr1	23187987	23188025	(225768397)	+	(TG)n	Simple_repeat	1	39	(0)	41818
370	23.5	6.5	4.2	chr1	23957481	23957600	(224998822)	+	MIRb	SINE/MIR	119	241	(27)	43805
197	29.4	7.6	0.0	chr1	24438631	24438715	(224517707)	+	L2b	LINE/L2	3238	3370	(56)	44893
218	29.2	11.1	1.0	chr1	25820184	25820280	(223136142)	C	MIR1_Amn	SINE/MIR	(94)	136	29	47892
2289	8.0	3.9	0.0	chr1	25988534	25988833	(222967589)	+	AluSq2	SINE/Alu	2	313	(0)	48284
241	32.0	10.3	0.0	chr1	26035535	26035656	(222920766)	+	L2c	LINE/L2	3030	3165	(222)	48399
290	17.5	3.1	0.0	chr1	26287248	26287310	(222669112)	C	Charlie24	DNA/hAT-Charlie	(11)	2439	2375	48983
14	29.0	1.9	0.0	chr1	26336443	26336496	(222619926)	+	(CCGCCC)n	Simple_repeat	1	55	(0)	49103
12	18.3	0.0	7.0	chr1	26960367	26960409	(221996013)	+	(CCCCCT)n	Simple_repeat	1	43	(0)	50561
347	24.0	14.0	4.4	chr1	27321775	27321909	(221634513)	+	MIRb	SINE/MIR	114	263	(5)	51511
23	14.6	0.0	0.0	chr1	27388444	27388481	(221567941)	+	(AC)n	Simple_repeat	1	38	(0)	51633
507	26.5	9.0	1.3	chr1	27388676	27388828	(221567594)	+	MIRb	SINE/MIR	20	185	(83)	51634
11	20.2	2.9	0.0	chr1	27593174	27593207	(221363215)	+	(GGCAGG)n	Simple_repeat	1	35	(0)	52087
12	21.8	0.0	6.2	chr1	27593508	27593555	(221362867)	+	(CCCTGG)n	Simple_repeat	1	48	(0)	52088
1169	22.7	9.2	2.0	chr1	27655057	27655552	(221300870)	C	L2a	LINE/L2	(154)	3272	2731	52228
236	26.7	8.4	9.8	chr1	28581222	28581354	(220375068)	C	MIRb	SINE/MIR	(112)	156	26	54586
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
672	12.1	12.8	0.0	chr1	28881838	28881953	(220074469)	C	AluJb	SINE/Alu	(179)	133	1	55395
21	17.1	0.0	10.0	chr1	29123930	29124009	(219832413)	+	(GCCCC)n	Simple_repeat	1	80	(0)	55966
19	20.8	0.0	6.3	chr1	29181798	29181860	(219774562)	+	(GGC)n	Simple_repeat	1	63	(0)	56088
959	23.7	9.5	5.6	chr1	30231993	30232621	(218723801)	C	LTR41C	LTR/ERVL	(8)	693	1	58065
235	27.2	0.0	5.8	chr1	31412817	31412902	(217543520)	C	L2b	LINE/L2	(1)	3374	3294	60628
26	0.0	6.2	0.0	chr1	31413154	31413185	(217543237)	+	(GGGGCC)n	Simple_repeat	1	34	(0)	60629
19	15.4	2.2	2.2	chr1	31672933	31672977	(217283445)	+	(CTCC)n	Simple_repeat	1	46	(0)	61128
35	29.8	3.9	3.8	chr1	31938185	31938388	(217018034)	+	(GCC)n	Simple_repeat	1	212	(0)	61652
15	14.7	0.0	0.0	chr1	31938446	31938475	(217017947)	+	(GCTG)n	Simple_repeat	1	30	(0)	61653
19	15.5	3.7	3.6	chr1	32336172	32336255	(216620167)	+	(CTCCG)n	Simple_repeat	1	84	(0)	62647
2140	25.5	7.9	17.1	chr1	32395125	32395608	(216560814)	+	L2a	LINE/L2	1636	2052	(1367)	62773
190	26.7	8.2	5.3	chr1	32716478	32716572	(216239850)	C	MIR3	SINE/MIR	(78)	130	33	63568
17	26.6	2.6	3.8	chr1	32754386	32754462	(216201960)	+	(ACAC)n	Simple_repeat	1	79	(0)	63658
16	35.1	0.0	1.5	chr1	32754532	32754597	(216201825)	+	(AC)n	Simple_repeat	1	66	(0)	63659
832	24.0	2.8	0.9	chr1	33176722	33176931	(215779491)	+	MIRb	SINE/MIR	47	260	(8)	64615
14	27.3	0.0	3.6	chr1	33181241	33181328	(215775094)	+	G-rich	Low_complexity	1	84	(0)	64626
1523	10.9	1.2	0.4	chr1	33336625	33336864	(215619558)	C	7SK	RNA	(89)	242	1	64930
46	9.7	0.0	0.0	chr1	33364360	33364425	(215591997)	+	(AC)n	Simple_repeat	1	66	(0)	64973
1176	11.3	0.0	0.0	chr1	35032118	35032310	(213924112)	C	AluSx	SINE/Alu	(0)	312	133	67887
507	30.7	7.9	3.8	chr1	36847637	36847819	(212108603)	C	MIR	SINE/MIR	(69)	193	3	71674
540	29.1	2.8	3.9	chr1	37306509	37306687	(211649735)	C	MIRb	SINE/MIR	(66)	202	26	72466
208	32.4	7.2	1.1	chr1	37990316	37990440	(210965982)	+	MIR3	SINE/MIR	15	154	(114)	73868
2434	7.0	0.0	2.9	chr1	37990482	37990794	(210965628)	+	AluSx1	SINE/Alu	1	304	(8)	73869
547	34.7	5.7	3.7	chr1	38136998	38137323	(210819099)	+	L2b	LINE/L2	3000	3332	(43)	74149
14	12.8	0.0	7.5	chr1	39491528	39491567	(209464855)	+	(CGGCCC)n	Simple_repeat	1	40	(0)	76793
495	23.4	18.0	3.6	chr1	40097466	40097687	(208858735)	C	MIR	SINE/MIR	(0)	262	2	78100
38	14.9	1.3	1.3	chr1	40654105	40654181	(208302241)	+	(CTCCC)n	Simple_repeat	1	77	(0)	79245
222	27.4	2.8	3.8	chr1	41371745	41371862	(207584560)	+	MIR3	SINE/MIR	15	129	(79)	80686
17	16.9	3.3	6.5	chr1	41371892	41371951	(207584471)	+	(CCT)n	Simple_repeat	1	62	(0)	80687
594	26.4	8.4	5.5	chr1	41703930	41704151	(207252271)	+	MIRb	SINE/MIR	10	237	(31)	81270
388	28.6	6.8	1.4	chr1	42816685	42816893	(206139529)	+	MIRc	SINE/MIR	2	222	(46)	83211
21	13.0	0.0	4.3	chr1	42817424	42817469	(206138953)	+	G-rich	Low_complexity	1	46	(0)	83212
12	26.3	0.0	5.5	chr1	42817470	42817478	(206138944)	+	(GGCCG)n	Simple_repeat	1	55	(0)	83213
353	31.4	18.5	1.7	chr1	43349739	43350257	(205606165)	+	L2c	LINE/L2	2755	3385	(2)	84192
324	23.1	15.6	2.7	chr1	43358013	43358123	(205598299)	+	MIR1_Amn	SINE/MIR	26	153	(77)	84212
192	27.8	6.4	0.0	chr1	43358252	43358339	(205598083)	+	MIR1_Amn	SINE/MIR	46	147	(121)	84213
399	30.0	13.3	4.9	chr1	43566169	43566394	(205390028)	+	MIR	SINE/MIR	4	252	(10)	84509
17	24.9	3.5	0.0	chr1	44030752	44030808	(204925614)	+	(GGCA)n	Simple_repeat	1	59	(0)	85305
213	32.5	2.4	1.2	chr1	45550560	45550640	(203405782)	+	MIR3	SINE/MIR	110	191	(17)	88278
21	20.1	0.0	0.0	chr1	46247477	46247516	(202708906)	+	(C)n	Simple_repeat	1	40	(0)	89651
26	5.4	0.0	2.4	chr1	47024002	47024042	(201932380)	+	(GGAGGGA)n	Simple_repeat	1	41	(0)	90860
21	11.3	1.8	7.1	chr1	47024043	47024056	(201932366)	+	GA-rich	Low_complexity	2	53	(0)	90861
246	29.8	7.0	2.6	chr1	47724675	47724835	(201231587)	C	MIRb	SINE/MIR	(101)	167	6	92189
12	10.7	2.9	5.7	chr1	50048045	50048078	(198908344)	+	(GCGAGA)n	Simple_repeat	1	35	(0)	96036
477	29.6	9.1	1.0	chr1	50277567	50277767	(198678655)	C	L3	LINE/CR1	(222)	3877	3659	96463
13924	15.3	1.8	2.2	chr1	50358740	50360354	(198596068)	+	L1PA10	LINE/L1	2073	3240	(4923)	96652
14	13.1	0.0	0.0	chr1	50960185	50960210	(197996212)	+	(CGAG)n	Simple_repeat	1	26	(0)	97705
20	25.0	0.0	0.0	chr1	50960209	50960260	(197996162)	+	(CGC)n	Simple_repeat	1	52	(0)	97706
13	23.3	0.0	0.0	chr1	51236363	51236397	(197720025)	+	(GCA)n	Simple_repeat	1	35	(0)	98248
11	22.2	0.0	4.9	chr1	51729791	51729831	(197226591)	+	G-rich	Low_complexity	1	41	(0)	99340
14	18.9	0.0	2.6	chr1	51990620	51990657	(196965765)	+	G-rich	Low_complexity	1	38	(0)	99906
17	4.3	0.0	0.0	chr1	52056281	52056304	(196900118)	+	(CCG)n	Simple_repeat	1	24	(0)	100081
13	15.2	2.5	4.9	chr1	52365969	52366008	(196590414)	+	(CCGCG)n	Simple_repeat	1	41	(0)	100699
12	18.7	4.3	4.2	chr1	52366414	52366459	(196589963)	+	(CTCG)n	Simple_repeat	1	48	(0)	100700
226	20.0	0.0	0.0	chr1	53220412	53220456	(195735966)	+	L1M1	LINE/L1	1015	1059	(6506)	102673
230	23.3	1.6	0.0	chr1	53582470	53582529	(195373893)	+	MIR3	SINE/MIR	81	141	(67)	103345
221	28.7	0.0	13.4	chr1	53682251	53682399	(195274023)	C	L2b	LINE/L2	(1)	3374	3246	103544
315	29.2	5.0	2.5	chr1	54199791	54199971	(194756451)	C	MIRb	SINE/MIR	(77)	191	13	104652
247	33.0	3.2	0.0	chr1	54332542	54332632	(194623790)	+	MIRc	SINE/MIR	40	133	(135)	104876
15	20.1	0.0	5.1	chr1	54332907	54332945	(194623477)	+	(CA)n	Simple_repeat	1	39	(0)	104877
348	29.4	6.9	4.5	chr1	54342595	54342792	(194613630)	+	MIRc	SINE/MIR	2	222	(46)	104895
343	28.2	19.3	3.6	chr1	54474397	54474617	(194481805)	C	MIR	SINE/MIR	(0)	268	5	105162
212	34.0	7.8	0.9	chr1	54887691	54887797	(194068625)	C	MIRb	SINE/MIR	(54)	214	100	106109
256	28.3	2.7	3.2	chr1	58699561	58699660	(190256762)	C	MIRb	SINE/MIR	(149)	119	8	113338
2268	11.9	0.0	0.0	chr1	59814046	59814356	(189142066)	C	AluSx	SINE/Alu	(1)	311	1	115493
17	18.5	0.0	0.0	chr1	59814721	59814751	(189141671)	+	(C)n	Simple_repeat	1	31	(0)	115494
709	28.9	3.8	8.7	chr1	61103293	61103625	(187852797)	+	L2c	LINE/L2	3060	3375	(12)	117667
49	0.0	0.0	0.0	chr1	61438999	61439040	(187517382)	+	(AC)n	Simple_repeat	1	42	(0)	118145
16	19.3	0.0	8.1	chr1	61742354	61742415	(187214007)	+	(CCCGCCC)n	Simple_repeat	1	62	(0)	118746
14	18.2	0.0	4.9	chr1	61742652	61742692	(187213730)	+	(GCCC)n	Simple_repeat	1	41	(0)	118747
193	30.6	1.6	1.6	chr1	64506205	64506267	(184450155)	C	L2b	LINE/L2	(7)	3368	3306	124012
347	23.8	11.6	0.0	chr1	64506310	64506393	(184450029)	C	MIRb	SINE/MIR	(2)	266	172	124013
599	11.1	0.0	0.0	chr1	77779898	77779987	(171176435)	+	5S	rRNA	1	90	(31)	143484
15	11.0	7.3	2.3	chr1	84690710	84690750	(164265672)	+	(CTGCGG)n	Simple_repeat	1	44	(0)	152920
12	22.7	5.7	1.8	chr1	84690818	84690870	(164265552)	+	G-rich	Low_complexity	1	56	(0)	152921
709	30.4	8.3	11.4	chr1	85465554	85466028	(163490394)	C	L3	LINE/CR1	(160)	3939	3481	154199
28	6.1	0.0	0.0	chr1	89524685	89524719	(159431703)	+	(CCT)n	Simple_repeat	1	35	(0)	159966
15	10.3	9.1	2.1	chr1	89524730	89524791	(159431631)	+	(CCGCCT)n	Simple_repeat	1	66	(0)	159967
11	20.8	0.0	2.9	chr1	89633168	89633202	(159323220)	+	(CGCGGC)n	Simple_repeat	1	35	(0)	160109
318	31.6	9.7	1.0	chr1	89989829	89990026	(158966396)	C	L2b	LINE/L2	(219)	3156	2940	160675
12	27.8	3.9	0.0	chr1	93448023	93448074	(155508348)	+	(CCCCCTC)n	Simple_repeat	1	54	(0)	166315
23	18.2	5.7	4.3	chr1	93449064	93449151	(155507271)	+	(CCTTT)n	Simple_repeat	1	93	(0)	166316
19	9.8	0.0	2.9	chr1	94418422	94418456	(154537966)	+	(GCC)n	Simple_repeat	1	35	(0)	167758
22	24.8	0.0	2.9	chr1	94806143	94806212	(154150210)	+	A-rich	Low_complexity	1	70	(0)	168340
451	22.6	6.1	4.3	chr1	94806295	94806456	(154149966)	C	L1M5	LINE/L1	(2887)	3259	3095	168341
15	19.5	0.0	0.0	chr1	101290492	101290526	(147665896)	+	(TTTC)n	Simple_repeat	1	35	(0)	177827
573	23.9	3.5	3.5	chr1	101290552	101290724	(147665698)	C	MER5B	DNA/hAT-Charlie	(0)	178	6	177828
18845	15.4	2.9	0.9	chr1	102617992	102623116	(146333306)	C	L1PA12	LINE/L1	(383)	5970	728	179542
188	37.8	1.3	2.6	chr1	107256439	107256514	(141699908)	C	L2c	LINE/L2	(63)	3324	3250	185195
831	16.9	6.9	0.0	chr1	109099836	109099983	(139856439)	+	FRAM	SINE/Alu	1	159	(17)	187985
16	23.3	7.3	0.0	chr1	109113841	109113895	(139842527)	+	(GC)n	Simple_repeat	1	59	(0)	188010
14	9.3	0.0	0.0	chr1	109114125	109114147	(139842275)	+	(CAG)n	Simple_repeat	1	23	(0)	188011
290	27.6	13.6	2.3	chr1	115469958	115470087	(133486335)	+	L2a	LINE/L2	3280	3426	(0)	198233
12	28.0	2.3	0.0	chr1	116373364	116373407	(132583015)	+	(CCTC)n	Simple_repeat	1	45	(0)	199614
19	12.6	4.4	2.1	chr1	116909989	116910033	(132046389)	+	GA-rich	Low_complexity	1	47	(0)	200486
12	15.0	4.9	4.7	chr1	117607048	117607088	(131349334)	+	GA-rich	Low_complexity	1	43	(0)	201571
306	28.1	10.1	1.2	chr1	144551093	144551254	(104405168)	C	LTR75B	LTR/ERVL	(425)	183	6	209605
302	21.5	7.1	0.0	chr1	144551260	144551324	(104405098)	+	MER45B	DNA/hAT-Tip100	311	380	(660)	209606
19	14.4	0.0	0.0	chr1	145280999	145281039	(103675383)	+	(G)n	Simple_repeat	1	41	(0)	210763
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
27	0.0	0.0	0.0	chr1	145425615	145425640	(103530782)	+	(AGGCGC)n	Simple_repeat	1	26	(0)	210934
1502	1.2	0.0	0.0	chr1	145465617	145465780	(103490642)	C	U1	snRNA	(1)	164	1	210998
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
24	15.6	1.1	0.0	chr1	148522481	148522534	(100433888)	+	G-rich	Low_complexity	1	54	(0)	215837
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
51	0.0	0.0	0.0	chr1	151594115	151594160	(97362262)	+	(CAAAA)n	Simple_repeat	1	46	(0)	221556
260	34.3	8.7	3.5	chr1	151594161	151594222	(97362200)	+	MIR3	SINE/MIR	132	201	(7)	221555
543	28.6	3.1	4.5	chr1	154841507	154841664	(94114758)	C	MIRb	SINE/MIR	(98)	170	4	226873
234	32.1	0.6	2.6	chr1	154842106	154842222	(94114200)	+	MIR3	SINE/MIR	77	192	(16)	226875
13	24.6	0.0	4.3	chr1	155002749	155002795	(93953627)	+	GA-rich	Low_complexity	1	47	(0)	227188
366	28.6	6.4	2.0	chr1	156491173	156491322	(92465100)	+	MIR3	SINE/MIR	33	189	(19)	230230
431	10.3	0.0	1.4	chr1	159141614	159141682	(89814740)	C	tRNA-Arg-AGA	tRNA	(6)	70	3	233951
19	13.7	2.4	2.3	chr1	160098411	160098452	(88857970)	+	(AGC)n	Simple_repeat	1	43	(0)	235223
39	21.7	0.0	7.8	chr1	160098681	160098822	(88857600)	+	(CGCCC)n	Simple_repeat	1	142	(0)	235224
505	26.8	7.4	0.0	chr1	160365702	160365839	(88590583)	C	MIRb	SINE/MIR	(50)	218	70	235637
21	13.4	0.0	0.0	chr1	160367069	160367101	(88589321)	+	(GT)n	Simple_repeat	1	33	(0)	235640
410	9.3	1.5	10.7	chr1	161097250	161097324	(87859098)	C	AluJr	SINE/Alu	(200)	112	45	236860
71	1.6	0.0	0.0	chr1	161097673	161097737	(87858685)	+	(TC)n	Simple_repeat	1	65	(0)	236861
13	9.7	0.0	0.0	chr1	161306389	161306410	(87650012)	+	(AGC)n	Simple_repeat	1	22	(0)	237266
19	33.5	4.7	0.7	chr1	161727070	161727198	(87229224)	+	(CCCCCGC)n	Simple_repeat	1	135	(0)	237996
13	19.8	0.0	2.7	chr1	162561644	162561680	(86394742)	+	(GCCCCC)n	Simple_repeat	1	37	(0)	239384
424	25.9	11.9	1.7	chr1	165570015	165570187	(83386235)	+	L1ME5	LINE/L1	5992	6184	(10)	243875
12	15.1	0.0	9.1	chr1	165630442	165630485	(83325937)	+	(CCCCCG)n	Simple_repeat	1	44	(0)	243993
12	24.1	0.0	2.4	chr1	166839354	166839394	(82117028)	+	(GGCGCC)n	Simple_repeat	1	41	(0)	245775
188	28.2	1.3	4.9	chr1	168137392	168137473	(80818949)	C	L2b	LINE/L2	(1)	3374	3296	247861
14	19.3	1.6	7.9	chr1	169106093	169106154	(79850268)	+	(CGCGCC)n	Simple_repeat	1	63	(0)	249448
7060	16.9	2.5	1.1	chr1	171017139	171018900	(77937522)	+	L1PA8	LINE/L1	3	1796	(4687)	252090
12	19.6	2.9	0.0	chr1	179954761	179954795	(69001627)	+	(CGCAGC)n	Simple_repeat	1	36	(0)	265605
16	9.3	0.0	0.0	chr1	180501906	180501941	(68454481)	+	(A)n	Simple_repeat	1	36	(0)	266469
4031	19.2	7.0	1.0	chr1	180922656	180923467	(68032955)	C	MER21B	LTR/ERVL	(4)	864	1	267175
993	21.6	18.6	1.2	chr1	180930684	180931079	(68025343)	C	MamGypsy2-I	LTR/Gypsy	(46)	4120	3650	267187
13	15.1	5.1	2.4	chr1	183471444	183471500	(65484922)	+	(CGCC)n	Simple_repeat	1	58	(0)	271187
18	9.3	0.0	7.3	chr1	185317384	185317424	(63638998)	+	(GCCCC)n	Simple_repeat	1	41	(0)	274053
352	33.7	6.5	4.7	chr1	186679921	186680132	(62276290)	C	MIRb	SINE/MIR	(51)	217	2	275943
13	14.3	4.8	4.5	chr1	186680276	186680317	(62276105)	+	(GGCGC)n	Simple_repeat	1	44	(0)	275944
329	28.6	3.8	7.2	chr1	201309567	201309732	(47646690)	C	MamRTE1	LINE/RTE-BovB	(1)	3811	3652	295814
450	25.3	10.6	0.5	chr1	201309738	201309909	(47646513)	+	MER20B	DNA/hAT-Charlie	32	219	(0)	295815
332	24.7	0.0	11.4	chr1	201693122	201693226	(47263196)	C	L2c	LINE/L2	(0)	3387	3295	296490
196	36.3	4.8	5.3	chr1	201693493	201693681	(47262741)	C	L2c	LINE/L2	(101)	3286	3099	296491
13	4.1	8.0	0.0	chr1	201896427	201896451	(47059971)	+	(CAAAA)n	Simple_repeat	1	27	(0)	296797
521	28.6	7.9	0.6	chr1	201896454	201896618	(47059804)	+	MIRb	SINE/MIR	67	244	(24)	296798
492	30.9	13.5	1.4	chr1	201942183	201942461	(47013961)	C	L2c	LINE/L2	(3)	3384	3067	296888
311	25.5	8.6	1.1	chr1	203272978	203273112	(45683310)	+	MIR3	SINE/MIR	40	189	(41)	299326
236	32.9	5.3	9.0	chr1	203304936	203305169	(45651253)	C	L2c	LINE/L2	(57)	3330	3106	299384
16	21.5	0.0	5.6	chr1	203305347	203305400	(45651022)	+	G-rich	Low_complexity	1	54	(0)	299385
12	20.4	0.0	0.0	chr1	204672677	204672705	(44283717)	+	(CTCC)n	Simple_repeat	1	29	(0)	302048
205	28.1	6.6	5.8	chr1	204673029	204673149	(44283273)	+	Tigger19a	DNA/TcMar-Tigger	72	193	(130)	302049
20	11.0	2.4	2.4	chr1	204834509	204834549	(44121873)	+	(CCT)n	Simple_repeat	1	42	(0)	302363
12	13.1	0.0	9.8	chr1	205344084	205344124	(43612298)	+	(CCCCCG)n	Simple_repeat	1	41	(0)	303253
33	28.9	0.0	0.0	chr1	205350793	205350873	(43605549)	+	(GT)n	Simple_repeat	1	81	(0)	303267
12	7.8	7.4	0.0	chr1	205352337	205352363	(43604059)	+	(CTCTC)n	Simple_repeat	1	29	(0)	303270
21	4.0	0.0	0.0	chr1	205352377	205352402	(43604020)	+	(AC)n	Simple_repeat	1	26	(0)	303271
17	26.0	0.0	5.6	chr1	205631508	205631578	(43324844)	+	(CCCGGC)n	Simple_repeat	1	71	(0)	303802
297	32.3	6.3	6.3	chr1	208162138	208162375	(40794047)	+	L3b	LINE/CR1	4800	5037	(195)	307700
447	22.6	2.9	12.8	chr1	208162311	208162518	(40793904)	+	MIR3	SINE/MIR	16	201	(7)	307701
565	25.5	4.2	1.2	chr1	208332092	208332254	(40624168)	C	MIRb	SINE/MIR	(45)	223	56	307980
412	28.2	10.3	4.4	chr1	209577075	209577256	(39379166)	C	MIRc	SINE/MIR	(49)	219	26	309868
2123	16.5	3.6	0.3	chr1	209772117	209772492	(39183930)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	2	310172
237	32.2	4.2	0.0	chr1	210253246	210253335	(38703087)	C	MIR3	SINE/MIR	(34)	174	81	310846
382	22.0	2.6	0.0	chr1	210374670	210374765	(38581657)	C	L1MD3	LINE/L1	(14)	7981	7897	311069
868	11.2	1.5	3.0	chr1	211676076	211676209	(37280213)	+	AluSz6	SINE/Alu	5	136	(176)	313175
950	17.4	1.1	0.0	chr1	212857841	212858012	(36098410)	+	MER41D	LTR/ERV1	384	557	(0)	315327
12	27.1	2.3	0.0	chr1	212916960	212917003	(36039419)	+	(ACCCT)n	Simple_repeat	1	45	(0)	315426
403	29.5	5.7	5.7	chr1	220689911	220690158	(28266264)	C	L1M5	LINE/L1	(504)	5620	5373	326594
11	20.1	2.9	0.0	chr1	220690463	220690496	(28265926)	+	G-rich	Low_complexity	1	35	(0)	326595
18	16.0	6.3	6.0	chr1	220787019	220787097	(28169325)	+	(TGGCGCC)n	Simple_repeat	1	84	(0)	326739
12	24.3	0.0	7.1	chr1	220882501	220882556	(28073866)	+	G-rich	Low_complexity	1	56	(0)	326862
16	25.2	1.7	3.3	chr1	224114132	224114191	(24842231)	+	(GGC)n	Simple_repeat	1	61	(0)	331817
1323	23.3	7.8	3.5	chr1	224182373	224182518	(24773904)	C	L1MC5	LINE/L1	(577)	8727	8582	331972
2623	21.3	1.2	0.6	chr1	225480741	225481255	(23475167)	+	LTR53	LTR/ERVL	1	518	(1)	334039
12	23.3	0.0	0.0	chr1	226548643	226548677	(22407745)	+	G-rich	Low_complexity	1	35	(0)	336100
31	3.1	0.0	0.0	chr1	226548933	226548965	(22407457)	+	(CGG)n	Simple_repeat	1	33	(0)	336101
792	15.8	2.4	0.0	chr1	226886821	226886940	(22069482)	+	FLAM_A	SINE/Alu	1	123	(19)	336639
13	19.8	0.0	6.5	chr1	227946614	227946659	(21009763)	+	GA-rich	Low_complexity	1	46	(0)	338085
2351	5.3	0.0	0.3	chr1	228130660	228130970	(20825452)	C	AluY	SINE/Alu	(0)	311	1	338333
1740	33.2	6.3	8.6	chr1	228130971	228131440	(20824982)	+	ERV24_Prim-int	LTR/ERV1	4131	4624	(2951)	338319
34	0.0	0.0	0.0	chr1	228458656	228458684	(20497738)	+	(GT)n	Simple_repeat	1	29	(0)	338742
2252	9.1	0.0	0.3	chr1	228458853	228459160	(20497262)	C	AluSc	SINE/Alu	(2)	307	1	338743
14	18.8	8.2	0.0	chr1	228804748	228804796	(20151626)	+	(GAGCTG)n	Simple_repeat	1	53	(0)	339219
3370	14.8	8.0	0.7	chr1	229030614	229031230	(19925192)	+	LTR9C	LTR/ERV1	1	666	(0)	339588
711	30.0	5.2	5.8	chr1	230587613	230588143	(18368279)	+	L1ME4c	LINE/L1	5357	5796	(328)	342120
13	17.4	0.0	2.9	chr1	230668216	230668249	(18288173)	+	GA-rich	Low_complexity	1	34	(0)	342227
16	19.7	4.0	1.9	chr1	230668248	230668297	(18288125)	+	G-rich	Low_complexity	1	52	(0)	342228
29	21.2	3.6	1.2	chr1	230978735	230978817	(17977605)	+	(CAG)n	Simple_repeat	1	86	(0)	342721
18	20.7	1.6	4.8	chr1	231422324	231422384	(17534038)	+	G-rich	Low_complexity	1	62	(0)	343473
12	17.2	4.9	2.3	chr1	231422410	231422450	(17533972)	+	(CCTCGG)n	Simple_repeat	1	43	(0)	343474
17	28.8	0.0	0.0	chr1	232059983	232060028	(16896394)	+	(TG)n	Simple_repeat	1	46	(0)	344454
13	17.7	3.1	0.0	chr1	232060031	232060062	(16896360)	+	GA-rich	Low_complexity	1	33	(0)	344455
24	12.3	2.3	0.0	chr1	233295575	233295618	(15660804)	+	(GCC)n	Simple_repeat	1	45	(0)	346165
13	13.1	4.1	7.8	chr1	233328323	233328376	(15628046)	+	(CCGC)n	Simple_repeat	1	51	(0)	346215
12	25.8	3.1	4.5	chr1	233328482	233328546	(15627876)	+	(GCGGCGC)n	Simple_repeat	1	67	(0)	346216
39	9.0	0.0	0.0	chr1	233624436	233624494	(15331928)	+	(TCACCTGGCC)n	Simple_repeat	1	59	(0)	346682
1015	22.3	8.9	7.0	chr1	234851836	234852073	(14104349)	+	LTR16A2	LTR/ERVL	83	317	(178)	348541
822	18.1	3.9	1.7	chr1	234852074	234852247	(14104175)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	348542
1030	17.5	0.6	0.6	chr1	235923998	235924175	(13032247)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	350643
79	3.8	0.0	0.0	chr1	236169173	236169255	(12787167)	+	(TGCAGG)n	Simple_repeat	1	83	(0)	351131
403	30.1	1.4	0.0	chr1	236908239	236908384	(12048038)	+	MIR	SINE/MIR	80	227	(35)	352436
473	30.8	9.9	6.9	chr1	237748049	237748446	(11207976)	C	LTR16E2	LTR/ERVL	(0)	572	131	353759
23	12.3	2.2	2.1	chr1	239386589	239386634	(9569788)	+	GA-rich	Low_complexity	1	47	(0)	356035
301	30.3	7.5	0.0	chr1	240887996	240888094	(8068328)	C	L2c	LINE/L2	(4)	3383	3277	358413
326	32.3	3.9	4.8	chr1	241376761	241376991	(7579431)	+	MLT1I	LTR/ERVL-MaLR	59	287	(124)	359207
12	17.6	2.4	4.7	chr1	244451566	244451607	(4504815)	+	(CCCGGCG)n	Simple_repeat	1	43	(0)	364208
13	15.4	7.7	5.7	chr1	245156422	245156486	(3799936)	+	(CCCGGCT)n	Simple_repeat	1	70	(0)	365570
17	21.5	4.9	1.6	chr1	245156526	245156586	(3799836)	+	(CTCCGG)n	Simple_repeat	1	64	(0)	365571
5712	17.0	1.7	0.7	chr1	246219081	246220045	(2736377)	+	LTR1D	LTR/ERV1	1	975	(0)	367115
1371	21.3	1.1	13.4	chr1	246407869	246408207	(2548215)	C	MLT1A0	LTR/ERVL-MaLR	(76)	289	2	367404
686	25.6	14.1	2.0	chr1	246408208	246408340	(2548082)	+	MER20B	DNA/hAT-Charlie	580	715	(68)	367403
1911	9.3	0.0	0.4	chr1	246457315	246457562	(2498860)	+	AluSx1	SINE/Alu	66	312	(0)	367494
19	0.0	0.0	6.5	chr1	246457563	246457593	(2498829)	+	(AGAAA)n	Simple_repeat	1	31	(0)	367495
195	36.7	2.5	1.0	chr1	246457708	246457871	(2498551)	+	L2a	LINE/L2	3022	3191	(235)	367496
297	31.6	6.0	4.8	chr1	247335821	247335885	(1620537)	C	L2a	LINE/L2	(1863)	1556	1492	368978
1496	17.6	8.2	12.8	chr1	247335886	247336321	(1620101)	+	MLT2D	LTR/ERVL	1	414	(0)	368979
189	29.5	11.8	4.3	chr1	248873012	248873128	(83294)	+	L2c	LINE/L2	3243	3369	(18)	370917
608	0.0	0.0	21.5	chr1	248873855	248873961	(82461)	+	tRNA-Leu-TTG	tRNA	1	84	(2)	370918
629	1.4	0.0	0.0	chr1	248874248	248874319	(82103)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	370919
227	17.5	2.4	0.0	chr1	248874345	248874384	(82038)	C	MER66C	LTR/ERV1	(148)	407	367	370920
27	0.0	0.0	9.1	chr10	1199622	1199665	(132597757)	+	(CAGGTGGG)n	Simple_repeat	1	44	(0)	372380
14	12.7	0.0	0.0	chr10	2685640	2685665	(131111757)	+	(TGT)n	Simple_repeat	1	26	(0)	374036
1638	16.0	3.0	6.4	chr10	2685666	2685848	(131111574)	C	AluJb	SINE/Alu	(10)	302	134	374037
2302	11.1	0.3	1.3	chr10	2685849	2686163	(131111259)	C	AluSx	SINE/Alu	(0)	312	1	374038
12	15.9	2.6	5.0	chr10	3046725	3046763	(130750659)	+	(CTCCCCA)n	Simple_repeat	1	40	(0)	374548
286	36.5	14.6	0.0	chr10	3211529	3211739	(130585683)	+	MIR	SINE/MIR	16	262	(0)	374776
35	0.0	0.0	0.0	chr10	3212054	3212086	(130585336)	+	(T)n	Simple_repeat	1	33	(0)	374777
2185	10.0	0.0	0.7	chr10	3212090	3212368	(130585054)	C	AluSq2	SINE/Alu	(33)	280	4	374778
13	22.9	1.6	6.2	chr10	11017856	11017918	(122779504)	+	(GCGCCCC)n	Simple_repeat	1	64	(0)	386429
17	11.3	5.5	6.9	chr10	11018021	11018075	(122779347)	+	(CGC)n	Simple_repeat	1	58	(0)	386430
2295	8.4	1.0	0.0	chr10	13849483	13849778	(119947644)	C	AluSp	SINE/Alu	(14)	299	1	391479
13	15.5	4.1	5.9	chr10	15097302	15097350	(118700072)	+	(GCGAG)n	Simple_repeat	1	51	(0)	393620
1841	13.8	0.7	2.1	chr10	15386637	15386926	(118410496)	+	AluJo	SINE/Alu	9	294	(18)	394170
1269	30.4	11.1	7.1	chr10	17712980	17714305	(116083117)	+	L2a	LINE/L2	1952	3341	(85)	397904
12	36.1	0.0	2.6	chr10	21534011	21534087	(112263335)	+	(CCCGCG)n	Simple_repeat	1	77	(0)	403878
1088	27.4	14.2	5.2	chr10	23106449	23106906	(110690516)	+	LTR33	LTR/ERVL	1	499	(16)	406281
15	18.9	2.2	4.3	chr10	26860996	26861041	(106936381)	+	(CCT)n	Simple_repeat	1	47	(0)	412439
1451	7.9	0.0	0.0	chr10	27154563	27154739	(106642683)	C	AluSx1	SINE/Alu	(5)	307	131	412952
13	18.5	7.0	0.0	chr10	27745612	27745654	(106051768)	+	G-rich	Low_complexity	1	46	(0)	413919
16	15.5	2.8	0.0	chr10	28302635	28302681	(105494741)	+	(CGCCCC)n	Simple_repeat	1	48	(0)	414797
13	25.0	0.0	0.0	chr10	28303080	28303117	(105494305)	+	(GGCGG)n	Simple_repeat	1	38	(0)	414798
1624	17.7	1.7	3.3	chr10	31104709	31105008	(102692414)	+	AluJr4	SINE/Alu	2	296	(16)	419854
26	10.1	1.6	6.5	chr10	31319141	31319201	(102478221)	+	G-rich	Low_complexity	1	62	(0)	420164
12	16.8	0.0	0.0	chr10	31760228	31760254	(102037168)	+	(CCGCC)n	Simple_repeat	1	27	(0)	420705
596	31.3	8.9	3.3	chr10	36038366	36038850	(97758572)	+	LTR33	LTR/ERVL	1	515	(0)	427464
17	19.1	0.0	5.7	chr10	37976528	37976580	(95820842)	+	(CCCGG)n	Simple_repeat	1	53	(0)	430348
2006	11.8	3.6	0.0	chr10	42637656	42637951	(91159471)	C	AluSp	SINE/Alu	(6)	307	1	432328
14	0.0	4.2	4.0	chr10	43265136	43265159	(90532263)	+	(CCT)n	Simple_repeat	1	25	(0)	433137
12	22.1	3.9	3.8	chr10	43397129	43397179	(90400243)	+	G-rich	Low_complexity	1	53	(0)	433410
550	30.2	11.1	1.9	chr10	44311282	44311706	(89485716)	C	L3	LINE/CR1	(77)	4022	3554	434690
26	0.0	6.2	0.0	chr10	44959722	44959753	(88837669)	+	(GGGGCGA)n	Simple_repeat	1	34	(0)	435466
14	8.1	0.0	6.7	chr10	45594704	45594733	(88202689)	+	(GGC)n	Simple_repeat	1	30	(0)	436272
358	25.9	6.2	1.8	chr10	46517470	46517598	(87279824)	+	MIRb	SINE/MIR	32	167	(101)	437788
18	11.7	0.0	0.0	chr10	47377540	47377567	(86419855)	+	(CA)n	Simple_repeat	1	28	(0)	439109
44	0.0	0.0	0.0	chr10	47377601	47377638	(86419784)	+	(CA)n	Simple_repeat	1	38	(0)	439109
55	0.0	0.0	0.0	chr10	47377672	47377718	(86419704)	+	(CA)n	Simple_repeat	1	47	(0)	439109
13	15.6	5.6	0.0	chr10	47409774	47409809	(86387613)	+	(TGCCCTC)n	Simple_repeat	1	38	(0)	439139
333	31.1	14.9	3.3	chr10	48600006	48600188	(85197234)	+	MIRb	SINE/MIR	45	252	(16)	440770
14	14.4	5.0	2.4	chr10	59362668	59362707	(74434715)	+	G-rich	Low_complexity	1	42	(0)	455458
27	22.1	0.0	0.0	chr10	61001044	61001098	(72796324)	+	(GT)n	Simple_repeat	1	55	(0)	457945
12	12.2	3.7	0.0	chr10	61001367	61001393	(72796029)	+	(CGCCA)n	Simple_repeat	1	28	(0)	457946
1999	14.1	0.9	1.8	chr10	65570387	65570726	(68226696)	+	MER61A	LTR/ERV1	1	337	(4)	464914
17	21.3	4.0	6.3	chr10	69630003	69630078	(64167344)	+	(CTT)n	Simple_repeat	1	79	(0)	471961
14	18.5	2.7	9.2	chr10	69630061	69630134	(64167288)	+	(CCTCCCA)n	Simple_repeat	1	76	(0)	471962
454	27.9	8.5	0.0	chr10	71209391	71209551	(62587871)	C	MIRb	SINE/MIR	(77)	191	16	474797
299	37.0	4.3	0.0	chr10	71396079	71396232	(62401190)	+	L3	LINE/CR1	3937	4097	(2)	475182
239	20.9	10.3	4.4	chr10	71727717	71727850	(62069572)	C	MIR	SINE/MIR	(106)	156	12	475799
14	8.1	9.8	2.2	chr10	72089290	72089330	(61708092)	+	G-rich	Low_complexity	1	45	(0)	476503
246	29.6	8.8	2.3	chr10	72320812	72320939	(61476483)	+	MIRc	SINE/MIR	85	221	(47)	477045
234	34.8	4.2	1.9	chr10	72321118	72321278	(61476144)	+	MIRb	SINE/MIR	36	200	(68)	477046
16	23.7	4.4	2.8	chr10	73168204	73168271	(60629151)	+	G-rich	Low_complexity	1	71	(0)	478773
16	14.4	2.5	2.4	chr10	73998373	73998412	(59799010)	+	G-rich	Low_complexity	1	41	(0)	480357
647	29.4	4.3	2.6	chr10	73998479	73998705	(59798717)	+	MIRb	SINE/MIR	30	260	(8)	480358
7578	17.9	12.8	2.6	chr10	74206836	74208406	(59589016)	C	MER52A	LTR/ERV1	(0)	1755	1	480783
742	25.2	9.1	1.6	chr10	74921831	74922084	(58875338)	+	MamSINE1	SINE/tRNA-RTE	15	289	(1)	482130
130	36.2	3.3	2.9	chr10	78139176	78139269	(55658153)	+	(ATGTGT)n	Simple_repeat	6	99	(0)	487252
14	13.1	0.0	0.0	chr10	78139416	78139441	(55657981)	+	(CTCC)n	Simple_repeat	1	26	(0)	487253
835	23.0	11.0	1.3	chr10	78964303	78964531	(54832891)	C	MIR	SINE/MIR	(0)	262	9	488786
244	35.0	3.5	4.8	chr10	79132600	79132746	(54664676)	C	MIR3	SINE/MIR	(49)	159	15	489116
373	33.9	19.5	0.0	chr10	79133110	79133469	(54663953)	+	L2c	LINE/L2	2924	3370	(17)	489117
291	31.3	1.0	0.0	chr10	79228992	79229090	(54568332)	+	MIRc	SINE/MIR	46	145	(123)	489294
597	23.3	4.0	0.7	chr10	79229899	79230045	(54567377)	C	MIRb	SINE/MIR	(58)	210	59	489296
27	35.5	3.3	0.0	chr10	79230123	79230244	(54567178)	+	(TC)n	Simple_repeat	1	126	(0)	489297
15	14.2	3.0	10.1	chr10	79347551	79347617	(54449805)	+	(GCTGC)n	Simple_repeat	1	69	(0)	489469
16	28.8	0.0	0.0	chr10	79445059	79445109	(54352313)	+	(GCCAG)n	Simple_repeat	1	51	(0)	489638
20	9.4	3.9	5.7	chr10	79445563	79445613	(54351809)	+	(CCGCTG)n	Simple_repeat	1	53	(0)	489639
16	15.3	6.8	0.0	chr10	79445685	79445728	(54351694)	+	(GCCCC)n	Simple_repeat	1	47	(0)	489640
24	0.0	0.0	0.0	chr10	80662617	80662646	(53134776)	+	(AATC)n	Simple_repeat	1	30	(0)	491584
77	1.8	6.5	3.0	chr10	80662647	80662769	(53134653)	+	(TATC)n	Simple_repeat	1	131	(0)	491585
2168	16.6	2.8	7.9	chr10	82320700	82321333	(51476089)	+	LTR1F1	LTR/ERV1	1	729	(0)	493812
16	0.0	0.0	0.0	chr10	86664017	86664034	(47133388)	+	(TG)n	Simple_repeat	1	18	(0)	499935
15	11.1	0.0	3.2	chr10	86668844	86668874	(47128548)	+	(TGTC)n	Simple_repeat	1	31	(0)	499942
30	0.0	0.0	0.0	chr10	86669037	86669064	(47128358)	+	(CAGG)n	Simple_repeat	1	28	(0)	499943
59	0.0	0.0	0.0	chr10	86967151	86967200	(46830222)	+	(GT)n	Simple_repeat	1	50	(0)	500486
15	27.3	3.1	1.5	chr10	91798701	91798764	(41998658)	+	(GCCGCG)n	Simple_repeat	1	66	(0)	507864
19	21.2	5.4	2.6	chr10	91799079	91799152	(41998270)	+	(TTTTGG)n	Simple_repeat	1	78	(0)	507865
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
876	28.4	1.5	4.1	chr10	93752120	93752387	(40045035)	+	MIR	SINE/MIR	2	262	(0)	511722
13	21.8	2.7	0.0	chr10	95183860	95183896	(38613526)	+	(CGC)n	Simple_repeat	1	38	(0)	513856
1245	30.1	13.8	3.5	chr10	96359773	96360819	(37436603)	C	L2b	LINE/L2	(238)	3137	1955	515830
405	25.7	0.9	11.0	chr10	96360833	96360959	(37436463)	C	MER5B	DNA/hAT-Charlie	(6)	172	59	515831
83	32.9	0.0	0.0	chr10	97048708	97048951	(36748471)	+	(CAGG)n	Simple_repeat	1	244	(0)	517154
2244	9.9	0.3	0.0	chr10	97697912	97698213	(36099209)	C	AluSp	SINE/Alu	(10)	303	1	518527
1382	20.3	7.5	4.5	chr10	97698214	97698329	(36099093)	C	MLT1E1A	LTR/ERVL-MaLR	(256)	424	287	518526
311	23.1	7.7	9.2	chr10	97698398	97698516	(36098906)	C	MLT1E1A	LTR/ERVL-MaLR	(398)	162	46	518526
270	29.5	4.8	4.8	chr10	97816920	97817065	(35980357)	+	MER96	DNA/hAT-Tip100	25	170	(5)	518807
861	20.1	1.8	0.0	chr10	97817165	97817333	(35980089)	C	MER5B	DNA/hAT-Charlie	(6)	172	1	518808
301	35.9	2.9	2.9	chr10	98038174	98038374	(35759048)	+	L3b	LINE/CR1	4962	5112	(120)	519236
792	34.7	8.8	4.3	chr10	100374124	100374725	(33422697)	C	L2	LINE/L2	(531)	2888	2256	523228
15	23.3	0.0	0.0	chr10	100683845	100683884	(33113538)	+	(CCAGCT)n	Simple_repeat	1	40	(0)	523800
12	4.7	0.0	7.7	chr10	101050378	101050403	(32747019)	+	(CGCC)n	Simple_repeat	1	26	(0)	524384
21	23.5	1.5	2.9	chr10	102114921	102114997	(31682425)	+	(CTCC)n	Simple_repeat	1	75	(0)	526321
17	11.3	0.0	0.0	chr10	102115079	102115107	(31682315)	+	(AGGG)n	Simple_repeat	1	29	(0)	526322
227	26.7	5.3	3.2	chr10	102229791	102229883	(31567539)	C	MIR3	SINE/MIR	(55)	153	59	526552
323	25.8	5.4	0.6	chr10	102403679	102403777	(31393645)	C	MIRc	SINE/MIR	(57)	173	71	526859
436	33.0	2.5	8.2	chr10	102404010	102404067	(31393355)	C	MER91A	DNA/hAT-Tip100	(0)	196	148	526860
12	15.8	0.0	11.3	chr10	102421525	102421577	(31375845)	+	(GCCCC)n	Simple_repeat	1	53	(0)	526882
373	26.8	18.6	0.0	chr10	102422465	102422621	(31374801)	+	MER102b	DNA/hAT-Charlie	71	263	(78)	526883
12	11.5	3.3	3.2	chr10	102450877	102450906	(31346516)	+	(GCGGC)n	Simple_repeat	1	31	(0)	526950
452	30.0	9.5	5.0	chr10	104334782	104335121	(29462301)	+	MamRep605	LTR?	440	796	(53)	530544
22	22.1	0.0	3.6	chr10	110207604	110207659	(23589763)	+	(CA)n	Simple_repeat	1	56	(0)	539103
16	3.8	3.5	3.3	chr10	110717336	110717364	(23080058)	+	(CCT)n	Simple_repeat	1	30	(0)	540035
252	30.2	1.1	0.0	chr10	110717549	110717634	(23079788)	+	MIRb	SINE/MIR	16	102	(166)	540036
730	27.9	9.0	6.0	chr10	110717665	110718233	(23079189)	+	MLT1K	LTR/ERVL-MaLR	1	582	(13)	540037
14	4.3	0.0	7.1	chr10	115093817	115093844	(18703578)	+	(CGG)n	Simple_repeat	1	28	(0)	547070
12	24.2	3.5	3.4	chr10	118046682	118046695	(15750727)	+	(CTCCCT)n	Simple_repeat	1	57	(0)	551476
17	11.8	2.4	4.8	chr10	118046696	118046736	(15750686)	+	(CCT)n	Simple_repeat	1	42	(0)	551477
17	19.7	2.0	3.9	chr10	118342436	118342486	(15454936)	+	(TTTC)n	Simple_repeat	1	52	(0)	551885
2275	5.1	0.0	0.0	chr10	119344183	119344455	(14452967)	C	L1PA5	LINE/L1	(3)	6151	5879	553740
2320	10.5	0.0	1.0	chr10	119416580	119416892	(14380530)	C	AluSz	SINE/Alu	(1)	311	2	553867
1817	11.6	0.8	0.0	chr10	119686324	119686574	(14110848)	C	AluSz	SINE/Alu	(59)	253	1	554380
471	32.4	8.4	0.5	chr10	120979163	120979348	(12818074)	+	MIRb	SINE/MIR	67	268	(0)	556458
298	27.9	10.8	0.0	chr10	120979385	120979524	(12817898)	C	MER5A1	DNA/hAT-Charlie	(4)	162	6	556459
3800	13.7	4.7	0.2	chr10	121890988	121891623	(11905799)	C	LTR9C	LTR/ERV1	(0)	666	1	557891
211	20.3	7.5	0.0	chr10	122375444	122375517	(11421905)	C	MIRc	SINE/MIR	(159)	109	30	558777
279	19.1	16.7	4.5	chr10	123573481	123573590	(10223832)	C	MER5A1	DNA/hAT-Charlie	(40)	126	1	560537
447	29.9	0.6	5.8	chr10	123573591	123573778	(10223644)	+	MER5B	DNA/hAT-Charlie	1	178	(0)	560538
14	28.2	0.0	2.0	chr10	124389308	124389357	(9408065)	+	(CCCGCG)n	Simple_repeat	1	50	(0)	561813
1803	17.8	0.0	1.4	chr10	126583835	126584127	(7213295)	+	AluJo	SINE/Alu	2	290	(22)	565038
29	5.7	0.0	0.0	chr10	126584250	126584286	(7213136)	+	(CTGTCTGC)n	Simple_repeat	1	37	(0)	565039
37	8.0	4.7	2.2	chr10	126584350	126584434	(7212988)	+	(CTGTCCAC)n	Simple_repeat	1	89	(0)	565040
17	23.1	1.5	4.5	chr10	127906985	127907050	(5890372)	+	(CGCCCC)n	Simple_repeat	1	67	(0)	566791
16	21.1	4.1	0.0	chr10	127907052	127907100	(5890322)	+	(CGGAGC)n	Simple_repeat	1	51	(0)	566792
108	44.6	0.0	0.0	chr10	128943996	128944618	(4852804)	+	(ACAC)n	Simple_repeat	1	623	(0)	567984
535	26.3	9.2	5.2	chr10	131851315	131851563	(1945859)	+	HAL1	LINE/L1	1667	1926	(581)	571001
1379	16.6	1.7	0.4	chr10	131900258	131900492	(1896930)	+	AluJb	SINE/Alu	39	276	(36)	571059
1274	22.8	10.3	0.8	chr10	132238276	132238757	(1558665)	C	MER74A	LTR/ERVL	(0)	558	26	571444
1579	12.2	0.0	0.0	chr10	133307550	133307763	(489659)	+	AluSz6	SINE/Alu	88	301	(11)	572364
590	23.1	6.5	1.1	chr10	133307770	133307944	(489478)	C	Tigger3c	DNA/TcMar-Tigger	(47)	555	371	572365
809	17.2	0.7	6.8	chr10	133307945	133308107	(489315)	+	AluJo	SINE/Alu	121	273	(39)	572366
29	4.8	2.2	2.2	chr10	133443472	133443516	(353906)	+	(CACAGGTATC)n	Simple_repeat	1	46	(0)	572528
14	23.3	6.8	2.5	chr11	694230	694303	(134392319)	+	G-rich	Low_complexity	1	79	(0)	573780
12	17.9	6.5	2.0	chr11	728324	728369	(134358253)	+	G-rich	Low_complexity	1	49	(0)	573837
16	16.4	0.0	0.0	chr11	796292	796325	(134290297)	+	G-rich	Low_complexity	1	34	(0)	573956
16	14.2	3.1	9.0	chr11	851680	851744	(134234878)	+	G-rich	Low_complexity	1	67	(0)	574021
2527	5.6	0.0	0.3	chr11	857401	857702	(134228920)	C	AluY	SINE/Alu	(10)	301	1	574026
238	28.4	12.0	0.0	chr11	3092056	3092150	(131994472)	+	MIRc	SINE/MIR	47	154	(114)	576571
249	27.9	11.0	6.5	chr11	3093152	3093289	(131993333)	C	L3	LINE/CR1	(108)	3991	3847	576573
15	24.8	3.4	1.6	chr11	3217200	3217258	(131869364)	+	GA-rich	Low_complexity	1	61	(0)	576736
13	24.2	2.3	0.0	chr11	3642034	3642077	(131444545)	+	(CCCGCCC)n	Simple_repeat	1	45	(0)	577375
14	22.8	3.8	1.8	chr11	6390309	6390361	(128696261)	+	G-rich	Low_complexity	1	55	(0)	581255
429	31.9	4.2	3.6	chr11	6612778	6612969	(128473653)	C	L2c	LINE/L2	(12)	3375	3183	581579
323	36.0	3.1	1.0	chr11	8243545	8243714	(126842908)	+	L3b	LINE/CR1	3463	3594	(505)	583717
2279	9.6	0.7	0.0	chr11	10750397	10750697	(124335925)	C	AluSx1	SINE/Alu	(9)	303	1	588074
23	14.0	2.1	0.0	chr11	10858202	10858248	(124228374)	+	(AGCCGC)n	Simple_repeat	1	48	(0)	588254
269	28.5	7.5	6.1	chr11	10858288	10858418	(124228204)	C	MER5A	DNA/hAT-Charlie	(0)	189	57	588255
19	3.9	0.0	0.0	chr11	11578985	11579011	(123507611)	+	(AGGA)n	Simple_repeat	1	27	(0)	589419
16	19.1	0.0	0.0	chr11	11620983	11621012	(123465610)	+	(AC)n	Simple_repeat	1	30	(0)	589486
12	19.5	2.9	0.0	chr11	12009140	12009174	(123077448)	+	(CGCCCC)n	Simple_repeat	1	36	(0)	590068
27	13.7	3.7	6.0	chr11	12674441	12674521	(122412101)	+	(CGCCG)n	Simple_repeat	1	84	(0)	591160
11	14.8	4.9	4.7	chr11	13277392	13277432	(121809190)	+	G-rich	Low_complexity	1	43	(0)	592124
13	33.7	1.4	1.4	chr11	13277699	13277770	(121808852)	+	G-rich	Low_complexity	1	73	(0)	592125
31	0.0	0.0	0.0	chr11	14422691	14422717	(120663905)	+	(TG)n	Simple_repeat	1	27	(0)	593919
13	30.2	0.0	6.9	chr11	14644665	14644751	(120441871)	+	(TGGTGC)n	Simple_repeat	1	87	(0)	594298
14	24.0	0.0	0.0	chr11	14891684	14891722	(120194900)	+	(GGAGCA)n	Simple_repeat	1	39	(0)	594637
18	15.5	0.0	0.0	chr11	14905753	14905782	(120180840)	+	(GT)n	Simple_repeat	1	30	(0)	594661
12	22.1	6.4	0.0	chr11	17207842	17207888	(117878734)	+	(CCTCAG)n	Simple_repeat	1	50	(0)	598286
15	19.4	3.5	5.0	chr11	17276711	17276768	(117809854)	+	(GGCG)n	Simple_repeat	1	60	(0)	598473
307	23.6	0.0	0.0	chr11	17864812	17864866	(117221756)	+	MIR3	SINE/MIR	45	99	(109)	599449
337	28.7	3.7	1.5	chr11	17864917	17865047	(117221575)	+	L1P1	LINE/L1	4902	5035	(1111)	599450
14	17.6	2.5	2.4	chr11	19345199	19345238	(115741384)	+	(CGGCAG)n	Simple_repeat	1	41	(0)	602038
12	17.5	3.1	0.0	chr11	19345822	19345853	(115740769)	+	(TGTGCT)n	Simple_repeat	1	33	(0)	602039
966	26.1	8.0	6.8	chr11	19523748	19524216	(115562406)	+	L2c	LINE/L2	2913	3387	(0)	602358
524	23.2	8.5	0.0	chr11	27507067	27507217	(107579405)	+	MIR3	SINE/MIR	36	200	(8)	614072
12	11.9	0.0	6.5	chr11	31817774	31817804	(103268818)	+	G-rich	Low_complexity	1	31	(0)	620447
23	26.6	3.5	1.1	chr11	34358179	34358265	(100728357)	+	G-rich	Low_complexity	1	90	(0)	625129
25	6.7	0.0	0.0	chr11	39929017	39929048	(95157574)	+	(A)n	Simple_repeat	1	32	(0)	633169
15	4.7	0.0	0.0	chr11	43358854	43358875	(91727747)	+	(CTC)n	Simple_repeat	1	22	(0)	638336
17	9.1	0.0	0.0	chr11	44780202	44780225	(90306397)	+	(AC)n	Simple_repeat	1	24	(0)	640827
15	18.6	2.7	0.0	chr11	44780455	44780491	(90306131)	+	(TCAT)n	Simple_repeat	1	38	(0)	640828
566	23.4	0.8	0.8	chr11	44812162	44812320	(90274302)	+	MIRb	SINE/MIR	25	182	(48)	640898
266	30.6	3.9	0.0	chr11	44894653	44894750	(90191872)	+	MIR3	SINE/MIR	82	183	(25)	641071
202	21.3	16.4	0.0	chr11	45105412	45105472	(89981150)	C	MIR3	SINE/MIR	(92)	116	44	641515
394	32.9	5.3	2.0	chr11	45511145	45511325	(89575297)	C	L2b	LINE/L2	(0)	3387	3208	642255
13	18.9	8.3	0.0	chr11	45886385	45886432	(89200190)	+	(CCTGG)n	Simple_repeat	1	52	(0)	642972
12	14.4	0.0	0.0	chr11	47642477	47642500	(87444122)	+	(CGGA)n	Simple_repeat	1	24	(0)	646353
17	20.9	2.7	6.5	chr11	47642561	47642635	(87443987)	+	(GCCC)n	Simple_repeat	1	77	(0)	646354
197	31.5	2.2	3.3	chr11	57475984	57476075	(77610547)	C	MIRb	SINE/MIR	(176)	92	2	653788
12	31.0	0.0	1.9	chr11	57482787	57482839	(77603783)	+	(CCCCCGC)n	Simple_repeat	1	53	(0)	653804
16	24.8	0.0	7.8	chr11	57482840	57482857	(77603765)	+	(CCCTC)n	Simple_repeat	17	77	(0)	653803
561	28.5	6.6	3.4	chr11	57493289	57493524	(77593098)	C	MIRc	SINE/MIR	(8)	260	17	653825
248	26.0	11.0	0.0	chr11	57493824	57493896	(77592726)	+	MIRc	SINE/MIR	117	198	(70)	653826
672	23.9	1.1	5.4	chr11	57531118	57531303	(77555319)	+	MER5B	DNA/hAT-Charlie	1	178	(0)	653920
281	26.7	8.0	12.9	chr11	59172915	59173138	(75913484)	C	MamRep1879	DNA/hAT-Tip100?	(0)	216	5	656442
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
18	30.1	0.0	1.6	chr11	59755459	59755521	(75331101)	+	(GCC)n	Simple_repeat	1	63	(0)	657377
12	25.7	3.4	3.3	chr11	59755744	59755802	(75330820)	+	(CCCTC)n	Simple_repeat	1	61	(0)	657378
23	20.4	6.1	2.3	chr11	60924488	60924569	(74162053)	+	(GCG)n	Simple_repeat	1	87	(0)	659115
345	29.4	14.1	2.8	chr11	61141548	61141729	(73944893)	+	MIRb	SINE/MIR	26	231	(37)	659565
307	29.4	0.5	1.3	chr11	61496879	61497757	(73588865)	+	(TG)n	Simple_repeat	1	870	(0)	660305
15	7.8	0.0	3.5	chr11	61508644	61508672	(73577950)	+	(GCCCC)n	Simple_repeat	1	29	(0)	660333
25	8.4	2.6	0.0	chr11	61554284	61554321	(73532301)	+	(CA)n	Simple_repeat	1	39	(0)	660397
35	25.5	2.7	1.8	chr11	61554428	61554537	(73532085)	+	(AC)n	Simple_repeat	1	113	(0)	660398
17	15.6	0.0	0.0	chr11	61610370	61610398	(73476224)	+	(AC)n	Simple_repeat	1	29	(0)	660498
246	29.6	4.3	4.3	chr11	61628431	61628522	(73458100)	+	MIR	SINE/MIR	94	185	(77)	660539
2482	8.2	0.0	0.0	chr11	62664324	62664629	(72421993)	C	AluSx1	SINE/Alu	(5)	307	2	662525
20	8.1	2.3	4.5	chr11	63671527	63671569	(71415053)	+	(CGAGG)n	Simple_repeat	1	44	(0)	664137
27	3.5	0.0	0.0	chr11	63916968	63916997	(71169625)	+	(CGG)n	Simple_repeat	1	30	(0)	664646
21	21.1	5.8	3.3	chr11	63917069	63917155	(71169467)	+	(CTCG)n	Simple_repeat	1	92	(0)	664647
380	29.6	14.5	3.3	chr11	63919998	63920210	(71166412)	+	L2b	LINE/L2	3135	3375	(0)	664649
14	25.6	0.0	7.2	chr11	64028648	64028673	(71057949)	+	(CCCCTC)n	Simple_repeat	1	48	(21)	664877
12	20.2	2.9	0.0	chr11	64028674	64028707	(71057915)	+	(CCT)n	Simple_repeat	1	35	(0)	664878
14	25.6	0.0	7.2	chr11	64028708	64028716	(71057906)	+	(CCCCTC)n	Simple_repeat	49	69	(0)	664877
311	30.2	3.6	5.9	chr11	64284961	64285124	(70801498)	+	MIRb	SINE/MIR	100	268	(0)	665322
17	11.3	5.0	2.4	chr11	64335477	64335516	(70751106)	+	(TAT)n	Simple_repeat	1	42	(0)	665418
1631	12.5	5.5	6.1	chr11	64335542	64335836	(70750786)	+	AluSx1	SINE/Alu	12	304	(8)	665419
370	22.6	2.3	8.6	chr11	64449345	64449484	(70637138)	+	LTR78	LTR/ERV1	248	378	(926)	665649
257	25.6	14.2	4.3	chr11	64449595	64449733	(70636889)	+	LTR16A1	LTR/ERVL	89	243	(213)	665650
15	9.7	0.0	0.0	chr11	64627643	64627664	(70458958)	+	(TG)n	Simple_repeat	1	22	(0)	665961
27	17.4	5.1	8.3	chr11	64803150	64803287	(70283335)	+	G-rich	Low_complexity	1	145	(0)	666238
266	16.4	3.5	0.0	chr11	64847419	64847473	(70239149)	+	MIRc	SINE/MIR	63	119	(149)	666329
333	35.4	11.4	2.5	chr11	65888990	65889427	(69197195)	+	L2c	LINE/L2	2328	2809	(610)	668356
14	21.8	0.0	8.1	chr11	66277970	66278031	(68808591)	+	G-rich	Low_complexity	1	62	(0)	669165
14	21.2	0.0	7.1	chr11	66278127	66278182	(68808440)	+	(CCCCG)n	Simple_repeat	1	56	(0)	669166
728	2.4	0.0	0.0	chr11	66348120	66348201	(68738421)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	669283
13	16.2	0.0	5.3	chr11	66371654	66371691	(68714931)	+	G-rich	Low_complexity	1	38	(0)	669343
946	9.4	0.0	0.0	chr11	66439269	66439385	(68647237)	+	AluJo	SINE/Alu	2	118	(194)	669515
458	29.1	6.8	0.0	chr11	66478872	66479022	(68607600)	+	MIRb	SINE/MIR	86	247	(21)	669603
259	23.4	0.0	5.8	chr11	66479165	66479250	(68607372)	C	MIR1_Amn	SINE/MIR	(65)	165	85	669604
750	33.6	9.7	4.1	chr11	67389148	67389838	(67696784)	C	L2b	LINE/L2	(92)	3283	2543	671557
12	25.5	0.0	0.0	chr11	67606676	67606712	(67479910)	+	(GAGC)n	Simple_repeat	1	37	(0)	671985
488	16.4	0.0	0.0	chr11	68460147	68460219	(66626403)	C	tRNA-Ala-GCY	tRNA	(2)	74	2	673466
337	27.0	9.3	3.1	chr11	69131505	69131634	(65954988)	C	MIRb	SINE/MIR	(31)	237	99	674568
1717	19.0	4.3	4.1	chr11	69373978	69374229	(65712393)	+	MLT1B	LTR/ERVL-MaLR	115	369	(21)	674985
1461	27.6	7.9	0.6	chr11	69499109	69499575	(65587047)	+	L1MC3	LINE/L1	7269	7772	(13)	675184
13	22.1	2.3	2.2	chr11	69638351	69638394	(65448228)	+	(CCCCCAG)n	Simple_repeat	1	45	(0)	675425
233	34.1	8.1	0.6	chr11	69892871	69893041	(65193581)	C	LTR33	LTR/ERVL	(328)	187	3	675909
297	28.8	0.0	0.0	chr11	70202853	70202932	(64883690)	+	MamRep1151	LTR?	626	705	(4)	676432
240	29.2	12.9	9.4	chr11	70464834	70465056	(64621566)	C	L2a	LINE/L2	(43)	3383	3152	676908
12	26.1	1.8	3.5	chr11	70815158	70815175	(64271447)	+	GA-rich	Low_complexity	1	19	(0)	677404
73	0.0	0.0	0.0	chr11	70815176	70815237	(64271385)	+	(AC)n	Simple_repeat	1	62	(0)	677405
12	26.1	1.8	3.5	chr11	70815238	70815274	(64271348)	+	GA-rich	Low_complexity	20	54	(0)	677406
280	24.2	1.6	0.0	chr11	71255426	71255487	(63831135)	C	MIR3	SINE/MIR	(56)	152	90	677944
231	27.5	20.4	0.0	chr11	72743942	72744120	(62342502)	+	L2c	LINE/L2	2946	3170	(217)	680500
13	19.4	4.9	0.0	chr11	72744150	72744190	(62342432)	+	(CTGTGA)n	Simple_repeat	1	43	(0)	680501
222	30.6	15.3	0.0	chr11	72744299	72744409	(62342213)	C	MIR3	SINE/MIR	(58)	150	20	680502
22	13.4	0.0	0.0	chr11	72782561	72782594	(62304028)	+	(AC)n	Simple_repeat	1	34	(0)	680580
264	25.4	0.0	1.4	chr11	72782743	72782814	(62303808)	+	MIR3	SINE/MIR	48	118	(90)	680581
15	18.7	0.0	6.2	chr11	73307732	73307779	(61778843)	+	G-rich	Low_complexity	1	48	(0)	681606
17	0.0	0.0	0.0	chr11	74397746	74397764	(60688858)	+	(T)n	Simple_repeat	1	19	(0)	683974
184	20.7	19.6	0.0	chr11	74492973	74493054	(60593568)	+	MIR3	SINE/MIR	86	187	(21)	684200
15	22.6	3.3	3.2	chr11	74493319	74493378	(60593244)	+	(GCACGC)n	Simple_repeat	1	62	(0)	684201
19	25.4	0.0	0.0	chr11	75668888	75668938	(59417684)	+	(GCC)n	Simple_repeat	1	51	(0)	686539
14	27.5	3.5	0.0	chr11	75668987	75669043	(59417579)	+	(GCCGCT)n	Simple_repeat	1	59	(0)	686540
12	22.2	4.8	0.0	chr11	75669187	75669228	(59417394)	+	(TCCCTCC)n	Simple_repeat	1	44	(0)	686541
206	28.9	5.5	3.7	chr11	75669247	75669354	(59417268)	+	MIR3	SINE/MIR	37	146	(62)	686542
16	10.7	4.5	4.3	chr11	77046244	77046287	(58040335)	+	(GCACCCCC)n	Simple_repeat	1	46	(0)	689154
384	31.9	4.7	8.9	chr11	77046316	77046656	(58039966)	+	L1M4	LINE/L1	3625	3947	(2196)	689155
389	28.6	12.0	1.2	chr11	77091402	77091564	(57995058)	+	MIRb	SINE/MIR	40	222	(46)	689243
35	9.4	0.0	8.5	chr11	77474131	77474212	(57612410)	+	(CCCCTC)n	Simple_repeat	1	82	(0)	689967
15	13.7	3.1	0.0	chr11	77474212	77474243	(57612379)	+	(CGG)n	Simple_repeat	1	33	(0)	689968
17	0.0	0.0	0.0	chr11	78416780	78416798	(56669824)	+	(A)n	Simple_repeat	1	19	(0)	691987
3082	23.4	8.0	5.4	chr11	79707590	79708382	(55378240)	+	L1MEf	LINE/L1	1550	2355	(3791)	694472
1418	23.7	9.2	9.3	chr11	79708383	79709081	(55377541)	+	LTR41C	LTR/ERVL	4	701	(0)	694481
543	27.2	3.2	7.2	chr11	82900866	82901127	(52185495)	C	MIRb	SINE/MIR	(3)	265	15	699672
189	31.4	4.1	1.4	chr11	85648194	85648264	(49438358)	C	L3	LINE/CR1	(3833)	266	194	704148
341	28.8	14.6	0.9	chr11	86301816	86302017	(48784605)	+	MIRb	SINE/MIR	16	257	(11)	705331
558	22.5	9.1	3.5	chr11	87036793	87036990	(48049632)	+	L2a	LINE/L2	3216	3425	(1)	706528
258	19.8	17.3	2.3	chr11	94494449	94494536	(40592086)	+	MIRc	SINE/MIR	90	193	(75)	717221
15	20.5	0.0	2.4	chr11	94544397	94544437	(40542185)	+	(CAGCGG)n	Simple_repeat	1	41	(0)	717312
12	25.1	3.2	4.7	chr11	95067557	95067618	(40019004)	+	(GGC)n	Simple_repeat	1	64	(0)	718067
19	12.2	2.7	0.0	chr11	96389853	96389889	(38696733)	+	(CGCCTC)n	Simple_repeat	1	38	(0)	720073
14	20.9	4.3	2.0	chr11	102110476	102110522	(32976100)	+	GA-rich	Low_complexity	1	49	(0)	727405
18	21.2	4.8	1.5	chr11	102110645	102110706	(32975916)	+	(GGAGGC)n	Simple_repeat	1	65	(0)	727406
295	29.0	5.8	0.0	chr11	102268948	102269078	(32817544)	+	MIRb	SINE/MIR	95	233	(35)	727663
2255	13.9	1.6	0.8	chr11	104706974	104707351	(30379271)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	731267
3632	15.7	2.7	3.0	chr11	104707352	104707577	(30379045)	C	MER67C	LTR/ERV1	(473)	238	10	731266
315	21.5	1.2	0.2	chr11	106523237	106523316	(28563306)	C	MLT1H2	LTR/ERVL-MaLR	(2)	547	478	733678
324	30.5	9.6	5.7	chr11	106523324	106523605	(28563017)	C	MLT1H2	LTR/ERVL-MaLR	(252)	297	1	733678
12	30.6	0.0	4.6	chr11	109423708	109423772	(25662850)	+	(CAGCGG)n	Simple_repeat	1	65	(0)	738334
17	14.4	0.0	4.8	chr11	110092915	110092956	(24993666)	+	(GCGG)n	Simple_repeat	1	42	(0)	739265
614	30.7	16.2	5.5	chr11	111879628	111880047	(23206575)	C	L2c	LINE/L2	(4)	3383	2910	742120
3074	16.5	3.8	5.0	chr11	113554394	113555012	(21531610)	+	LTR9	LTR/ERV1	2	612	(0)	744756
268	22.0	6.3	0.0	chr11	115637522	115637580	(19449042)	C	L2a	LINE/L2	(3)	3423	3361	747986
14	6.1	11.8	0.0	chr11	115939820	115939853	(19146769)	+	(GGCA)n	Simple_repeat	1	38	(0)	748461
5073	13.7	3.5	1.6	chr11	116147577	116148397	(18938225)	+	LTR1A2	LTR/ERV1	1	837	(0)	748772
13619	17.1	5.5	4.8	chr11	116148398	116148805	(18937817)	+	L1MD1	LINE/L1	2299	2728	(3809)	748768
359	26.6	8.5	3.4	chr11	116484076	116484254	(18602368)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	749411
14	15.3	0.0	0.0	chr11	116484293	116484321	(18602301)	+	(TTTTC)n	Simple_repeat	1	29	(0)	749412
23	0.0	0.0	0.0	chr11	116484332	116484356	(18602266)	+	(A)n	Simple_repeat	1	25	(0)	749413
1881	16.5	0.7	0.0	chr11	116499120	116499422	(18587200)	+	AluJo	SINE/Alu	1	305	(7)	749443
479	18.7	0.0	0.0	chr11	116687639	116687713	(18398909)	+	MER63D	DNA/hAT-Blackjack	308	382	(679)	749756
43	26.8	0.0	0.0	chr11	116687889	116687995	(18398627)	+	(CA)n	Simple_repeat	1	107	(0)	749757
1922	12.9	0.0	6.9	chr11	116691315	116691632	(18394990)	+	AluJo	SINE/Alu	3	298	(14)	749765
18	13.5	0.0	0.0	chr11	116773200	116773232	(18313390)	+	(CACC)n	Simple_repeat	1	33	(0)	749918
343	22.9	14.5	2.3	chr11	118530369	118530520	(16556102)	+	MIRb	SINE/MIR	8	186	(82)	753063
677	29.5	7.1	13.3	chr11	119782581	119783108	(15303514)	C	MLT1O	LTR/ERVL-MaLR	(28)	514	22	755460
1401	16.8	20.6	0.3	chr11	119783169	119783490	(15303132)	C	MLT1A1	LTR/ERVL-MaLR	(2)	406	3	755461
2474	3.9	0.4	0.0	chr11	120684717	120684996	(14401626)	C	AluYc	SINE/Alu	(18)	281	1	756985
677	23.8	0.7	0.0	chr11	120685229	120685379	(14401243)	+	MER5A1	DNA/hAT-Charlie	12	163	(3)	756986
229	28.0	11.7	0.8	chr11	120746217	120746337	(14340285)	+	MIRc	SINE/MIR	16	148	(60)	757079
17	17.4	0.0	2.4	chr11	120746412	120746452	(14340170)	+	(AGGT)n	Simple_repeat	1	41	(0)	757080
295	26.1	12.0	1.1	chr11	123146053	123146141	(11940481)	C	MIR	SINE/MIR	(105)	157	58	760949
305	21.1	0.0	1.4	chr11	123580541	123580612	(11506010)	+	MIR3	SINE/MIR	104	174	(34)	761825
401	30.4	6.6	3.9	chr11	126585959	126586136	(8500486)	+	AmnSINE1	SINE/5S-Deu-L2	313	495	(80)	766326
930	21.9	4.3	0.0	chr11	130183562	130183807	(4902815)	C	L1M5	LINE/L1	(1553)	4593	4337	771495
1357	28.1	6.1	1.6	chr11	130183804	130184291	(4902331)	+	L1ME1	LINE/L1	5667	6177	(2)	771496
17	21.8	1.5	6.0	chr11	133948162	133948230	(1138392)	+	(TCTG)n	Simple_repeat	1	65	(0)	776557
18	18.3	1.6	6.2	chr11	134037391	134037453	(1049169)	+	G-rich	Low_complexity	1	64	(0)	776694
353	24.1	3.5	1.8	chr11	134037532	134037645	(1048977)	C	MIR3	SINE/MIR	(6)	202	87	776695
296	31.1	12.4	0.0	chr11	134516817	134516993	(569629)	C	L2b	LINE/L2	(1)	3374	3173	777330
24	17.5	5.4	2.6	chr11	134520831	134520904	(565718)	+	(TATC)n	Simple_repeat	1	78	(0)	777336
570	30.4	3.3	1.7	chr12	106074	106271	(133169038)	C	MIRb	SINE/MIR	(30)	238	28	778230
19	23.2	1.6	3.1	chr12	172389	172452	(133102857)	+	(CCCTG)n	Simple_repeat	1	65	(0)	778337
16	0.0	0.0	0.0	chr12	176621	176638	(133098671)	+	(TG)n	Simple_repeat	1	18	(0)	778340
29	3.2	0.0	0.0	chr12	459905	459936	(132815373)	+	(GGGGCG)n	Simple_repeat	1	32	(0)	778791
17	17.9	2.7	7.9	chr12	1594790	1594863	(131680446)	+	(GCGCCC)n	Simple_repeat	1	76	(0)	780921
331	34.0	6.0	0.5	chr12	2034715	2034903	(131240406)	C	L2c	LINE/L2	(0)	3387	3188	781595
190	19.3	5.0	5.0	chr12	2057283	2057342	(131217967)	+	L2b	LINE/L2	3316	3375	(0)	781630
274	18.4	0.0	0.0	chr12	2112968	2113016	(131162293)	C	MLT1K	LTR/ERVL-MaLR	(15)	580	532	781711
273	34.5	0.7	1.9	chr12	2783990	2784111	(130491198)	+	L2c	LINE/L2	3226	3352	(35)	782637
329	27.4	15.6	1.5	chr12	3263056	3263192	(130012117)	+	MIRc	SINE/MIR	38	197	(71)	783579
431	32.1	4.3	0.0	chr12	3263196	3263329	(130011980)	C	MIR3	SINE/MIR	(0)	208	69	783580
636	29.4	9.1	0.7	chr12	4308280	4308560	(128966749)	+	MER102b	DNA/hAT-Charlie	1	307	(34)	785309
311	32.0	10.3	3.7	chr12	4648773	4648934	(128626375)	+	MIR3	SINE/MIR	21	194	(14)	785849
14	13.2	2.6	5.1	chr12	5432180	5432217	(127843092)	+	(CTTT)n	Simple_repeat	1	39	(0)	787027
1981	12.6	2.3	1.0	chr12	6835949	6836249	(126439060)	+	AluJb	SINE/Alu	6	310	(2)	789495
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
19	7.2	0.0	0.0	chr12	6938123	6938152	(126337157)	+	(CTGCG)n	Simple_repeat	1	30	(0)	789669
11	20.9	0.0	10.0	chr12	7130721	7130780	(126144529)	+	G-rich	Low_complexity	1	60	(0)	789995
2376	9.7	1.3	0.0	chr12	10674473	10674780	(122600529)	+	AluSx1	SINE/Alu	1	312	(0)	795512
588	26.0	6.1	3.4	chr12	12268096	12268302	(121007007)	C	MIRc	SINE/MIR	(37)	231	19	797794
1354	24.2	4.0	5.7	chr12	12960730	12961083	(120314226)	+	MLT1H1	LTR/ERVL-MaLR	12	359	(196)	799161
443	20.4	0.7	13.9	chr12	12961108	12961272	(120314037)	C	LTR37A	LTR/ERV1	(231)	195	53	799162
300	22.6	5.1	4.1	chr12	13044135	13044231	(120231078)	C	MIRb	SINE/MIR	(69)	199	102	799300
4454	10.3	3.3	0.3	chr12	14714297	14714938	(118560371)	C	LTR9C	LTR/ERV1	(0)	666	5	801801
21199	10.6	1.3	1.0	chr12	18890261	18896672	(114378637)	C	L1PA8A	LINE/L1	(1)	6445	4	807220
280	21.4	10.0	5.7	chr12	19593665	19593788	(113681521)	+	L1ME3C	LINE/L1	5989	6118	(5)	808484
223	29.2	5.3	3.3	chr12	19594001	19594092	(113681217)	+	L3	LINE/CR1	2319	2412	(1687)	808474
17	4.2	0.0	0.0	chr12	19594106	19594130	(113681179)	+	(TCAT)n	Simple_repeat	1	25	(0)	808485
230	28.7	10.9	0.0	chr12	19594175	19594296	(113681013)	+	L3	LINE/CR1	2416	2552	(1547)	808474
2747	3.3	0.0	0.3	chr12	21658158	21658464	(111616845)	C	AluYf1	SINE/Alu	(5)	306	1	811058
21	7.5	0.0	0.0	chr12	22543594	22543621	(110731688)	+	(GT)n	Simple_repeat	1	28	(0)	812276
25	6.3	0.0	0.0	chr12	22543709	22543741	(110731568)	+	(TG)n	Simple_repeat	1	33	(0)	812277
19	26.9	0.0	3.0	chr12	22625357	22625422	(110649887)	+	(GTC)n	Simple_repeat	1	66	(0)	812442
16	13.2	0.0	0.0	chr12	23950042	23950066	(109325243)	+	(AC)n	Simple_repeat	1	25	(0)	814236
33	5.6	0.0	0.0	chr12	23950258	23950294	(109325015)	+	(AC)n	Simple_repeat	1	37	(0)	814237
17	12.0	0.0	5.0	chr12	23950547	23950586	(109324723)	+	A-rich	Low_complexity	1	40	(0)	814238
19	22.1	5.1	3.6	chr12	25386118	25386196	(107889113)	+	(CGC)n	Simple_repeat	1	83	(0)	816427
261	19.6	2.1	0.0	chr12	26622610	26622655	(106652654)	C	MER81	DNA/hAT-Blackjack	(2)	112	66	818243
300	35.0	6.2	6.9	chr12	30755000	30755260	(102520049)	+	L1M4b	LINE/L1	291	549	(6318)	824130
1063	25.9	7.0	7.8	chr12	32230481	32230853	(101044456)	C	L2	LINE/L2	(2606)	813	444	827078
13	11.2	3.2	3.1	chr12	32679264	32679294	(100596015)	+	GA-rich	Low_complexity	1	32	(0)	827925
12	12.6	0.0	3.6	chr12	32897112	32897139	(100378170)	+	(GCCCC)n	Simple_repeat	1	28	(0)	828310
18	22.1	6.7	1.2	chr12	38905614	38905688	(94369621)	+	G-rich	Low_complexity	1	80	(0)	831698
17	13.2	5.5	5.2	chr12	45990597	45990651	(87284658)	+	(CCTC)n	Simple_repeat	1	58	(0)	841694
21	24.8	6.1	0.0	chr12	47773124	47773205	(85502104)	+	G-rich	Low_complexity	1	87	(0)	844180
15	11.8	5.1	2.4	chr12	47773453	47773491	(85501818)	+	G-rich	Low_complexity	1	41	(0)	844181
1246	17.1	1.4	0.0	chr12	49622312	49622522	(83652787)	+	AluJb	SINE/Alu	85	298	(14)	847518
20	16.8	0.0	0.0	chr12	50057223	50057257	(83218052)	+	(GT)n	Simple_repeat	1	35	(0)	848345
2240	11.4	0.0	1.3	chr12	51835803	51836109	(81439200)	C	AluSq2	SINE/Alu	(9)	304	2	851980
17	11.0	4.7	4.4	chr12	51836244	51836286	(81439023)	+	GA-rich	Low_complexity	1	45	(0)	851981
362	27.0	4.8	1.0	chr12	51872511	51872611	(81402698)	+	L3	LINE/CR1	2371	2475	(1624)	852047
13	20.3	0.0	4.7	chr12	53493035	53493077	(79782232)	+	G-rich	Low_complexity	1	43	(0)	854860
11	27.2	2.0	2.0	chr12	53493221	53493270	(79782039)	+	G-rich	Low_complexity	1	51	(0)	854861
16	17.9	2.4	4.7	chr12	53750797	53750838	(79524471)	+	(GT)n	Simple_repeat	1	43	(0)	855387
23	20.4	0.0	0.0	chr12	53751052	53751096	(79524213)	+	(AC)n	Simple_repeat	1	45	(0)	855388
30	0.0	0.0	0.0	chr12	54159149	54159176	(79116133)	+	(CAGCCC)n	Simple_repeat	1	28	(0)	855960
606	5.6	0.0	0.0	chr12	56190369	56190439	(77084870)	+	tRNA-Ser-TCG	tRNA	6	76	(9)	859050
2265	10.3	0.7	0.0	chr12	56190451	56190742	(77084567)	C	AluSx	SINE/Alu	(0)	312	19	859051
272	21.9	0.0	8.8	chr12	56223992	56224071	(77051238)	C	MIRb	SINE/MIR	(186)	82	10	859121
17	19.3	0.0	2.3	chr12	56488251	56488293	(76787016)	+	G-rich	Low_complexity	1	43	(0)	859634
43	0.0	0.0	0.0	chr12	57216834	57216873	(76058436)	+	(CCGCCGCTC)n	Simple_repeat	1	40	(0)	860865
194	28.0	2.6	10.7	chr12	57522175	57522258	(75753051)	+	MIR3	SINE/MIR	90	166	(42)	861462
19	6.1	2.6	5.1	chr12	57632695	57632732	(75642577)	+	(CCT)n	Simple_repeat	1	39	(0)	861597
18	17.1	2.9	7.1	chr12	57754990	57755064	(75520245)	+	(CTCCC)n	Simple_repeat	1	71	(0)	861785
17	14.2	0.0	0.0	chr12	57755765	57755795	(75519514)	+	(GCC)n	Simple_repeat	1	31	(0)	861786
29	0.0	0.0	0.0	chr12	57772207	57772234	(75503075)	+	(GCTGG)n	Simple_repeat	1	28	(0)	861800
252	27.1	2.0	4.0	chr12	57782459	57782558	(75492751)	+	MIRc	SINE/MIR	168	265	(3)	861818
366	23.8	3.7	3.7	chr12	64609274	64609382	(68665927)	+	MIRc	SINE/MIR	102	210	(58)	871473
17	12.0	2.6	2.6	chr12	64824593	64824630	(68450679)	+	(CGCT)n	Simple_repeat	1	39	(0)	871866
21	34.0	1.3	0.0	chr12	65823657	65823732	(67451577)	+	(TG)n	Simple_repeat	1	77	(0)	873411
27	3.4	0.0	0.0	chr12	65824970	65824999	(67450310)	+	(ACCTCC)n	Simple_repeat	1	30	(0)	873415
24	25.5	3.7	2.7	chr12	65825000	65825008	(67450301)	+	(CCTCCT)n	Simple_repeat	4	20	(52)	873416
13	23.3	0.0	0.0	chr12	65825009	65825043	(67450266)	+	(CCG)n	Simple_repeat	1	35	(0)	873417
24	25.5	3.7	2.7	chr12	65825044	65825067	(67450242)	+	(CCTCCT)n	Simple_repeat	21	72	(0)	873416
15	23.2	1.9	3.6	chr12	65825209	65825262	(67450047)	+	(GGC)n	Simple_repeat	1	55	(0)	873418
372	25.8	5.9	5.2	chr12	65983502	65983636	(67291673)	+	L2b	LINE/L2	3240	3375	(0)	873619
20	22.8	0.0	7.3	chr12	66302344	66302425	(66972884)	+	(CCCCT)n	Simple_repeat	1	82	(0)	874171
226	32.8	4.1	3.3	chr12	66774791	66774910	(66500399)	+	Tigger16a	DNA/TcMar-Tigger	817	937	(20)	874874
308	32.5	7.5	7.5	chr12	68343153	68343578	(64931731)	+	LTR78	LTR/ERV1	765	1190	(114)	877206
19	6.1	5.7	0.0	chr12	69738825	69738859	(63536450)	+	(GCTCCCG)n	Simple_repeat	1	37	(0)	879832
18	18.5	8.2	0.0	chr12	69738860	69738884	(63536425)	+	(CGCTCCCG)n	Simple_repeat	2	66	(0)	879833
13	12.8	2.6	5.1	chr12	70242939	70242976	(63032333)	+	(GGAGTGA)n	Simple_repeat	1	39	(0)	880614
27	6.1	0.0	0.0	chr12	70242991	70243025	(63032284)	+	(AACACA)n	Simple_repeat	1	35	(0)	880615
15	29.4	1.6	1.5	chr12	85280565	85280628	(47994681)	+	(GGAAGGT)n	Simple_repeat	1	65	(0)	901405
14	8.2	4.3	8.3	chr12	89351575	89351620	(43923689)	+	(CGCGCC)n	Simple_repeat	1	48	(0)	906880
17	9.9	0.0	5.4	chr12	89525939	89525975	(43749334)	+	G-rich	Low_complexity	1	37	(0)	907165
229	36.9	5.4	1.7	chr12	94101215	94101393	(39173916)	+	Tigger19a	DNA/TcMar-Tigger	27	212	(111)	914667
192	26.2	12.6	1.9	chr12	95208764	95208835	(38066474)	+	MIRc	SINE/MIR	159	233	(35)	916753
20	0.0	0.0	0.0	chr12	95216670	95216691	(38058618)	+	(A)n	Simple_repeat	1	22	(0)	916760
29	10.2	0.0	0.0	chr12	96071387	96071428	(37203881)	+	(CA)n	Simple_repeat	1	42	(0)	918371
1512	22.1	12.3	2.1	chr12	96094033	96094501	(37180808)	C	L2a	LINE/L2	(1)	3425	2907	918424
617	24.8	8.0	1.4	chr12	96094563	96094783	(37180526)	+	MER20B	DNA/hAT-Charlie	540	776	(7)	918425
220	29.0	0.0	2.8	chr12	96985441	96985511	(36289798)	C	MIR	SINE/MIR	(101)	161	93	919983
645	2.8	0.0	0.0	chr12	98504252	98504323	(34770986)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	922375
932	12.3	0.0	0.0	chr12	101830343	101830472	(31444837)	+	FLAM_C	SINE/Alu	1	130	(13)	928027
13	17.5	0.0	2.9	chr12	101830487	101830520	(31444789)	+	G-rich	Low_complexity	1	34	(0)	928028
19	26.1	5.4	0.0	chr12	104064727	104064800	(29210509)	+	(GGC)n	Simple_repeat	1	78	(0)	931798
2136	11.6	0.0	1.9	chr12	106150907	106151216	(27124093)	+	AluSz	SINE/Alu	1	304	(8)	935715
23	28.5	1.3	0.0	chr12	106774607	106774682	(26500627)	+	GA-rich	Low_complexity	1	77	(0)	936818
477	31.3	5.4	4.9	chr12	109572739	109573107	(23702202)	+	MamRep4096	DNA/hAT-Tip100	1	371	(55)	942773
206	19.5	2.4	0.0	chr12	109677175	109677215	(23598094)	C	MIR3	SINE/MIR	(53)	155	114	943045
12	5.6	0.0	0.0	chr12	109996273	109996291	(23279018)	+	(GGC)n	Simple_repeat	1	19	(0)	943774
209	29.9	11.8	0.0	chr12	110885606	110885739	(22389570)	+	L2b	LINE/L2	3036	3187	(188)	945803
277	28.3	8.5	5.5	chr12	110885779	110886051	(22389258)	+	MER113A	DNA/hAT-Charlie	1	282	(32)	945804
1157	23.3	4.8	14.1	chr12	110937467	110937764	(22337545)	C	L2a	LINE/L2	(1)	3425	3182	945948
18	18.3	1.9	3.7	chr12	111405849	111405901	(21869408)	+	(GCCCC)n	Simple_repeat	1	54	(0)	947029
46	2.3	0.0	0.0	chr12	113241762	113241805	(20033504)	+	(GT)n	Simple_repeat	1	44	(0)	951137
233	27.6	4.9	0.0	chr12	113241849	113241906	(20033403)	+	L2a	LINE/L2	3364	3424	(2)	951138
852	29.9	16.2	1.5	chr12	113259425	113259900	(20015409)	C	MLT1K	LTR/ERVL-MaLR	(29)	566	7	951172
543	25.6	4.8	1.5	chr12	113259927	113260174	(20015135)	C	L1MC4a	LINE/L1	(1829)	6053	5867	951173
820	19.8	7.7	0.5	chr12	113659792	113659984	(19615325)	+	MER3	DNA/hAT-Charlie	1	208	(1)	952154
16	13.3	3.0	0.0	chr12	114399637	114399669	(18875640)	+	GA-rich	Low_complexity	1	34	(0)	953637
1127	31.6	6.7	1.8	chr12	114547310	114547936	(18727373)	C	MLT2F	LTR/ERVL	(0)	663	4	953938
1998	14.5	2.4	0.0	chr12	117112415	117112704	(16162605)	C	AluSx	SINE/Alu	(14)	298	2	959586
59	15.0	7.1	3.6	chr12	117125840	117126022	(16149287)	+	(CTGTCAC)n	Simple_repeat	1	196	(0)	959618
28	21.0	7.0	2.4	chr12	117190092	117190206	(16085103)	+	G-rich	Low_complexity	1	123	(0)	959739
16	33.1	1.4	1.3	chr12	117190381	117190454	(16084855)	+	(CCG)n	Simple_repeat	1	75	(0)	959740
15	20.1	2.9	0.0	chr12	117190477	117190510	(16084799)	+	(CG)n	Simple_repeat	1	35	(0)	959741
33	16.5	1.1	6.5	chr12	117968829	117968920	(15306389)	+	(TGC)n	Simple_repeat	1	93	(0)	961512
13	18.8	0.0	5.0	chr12	117968993	117969032	(15306277)	+	G-rich	Low_complexity	1	40	(0)	961513
12	5.5	0.0	0.0	chr12	117969131	117969149	(15306160)	+	(GGA)n	Simple_repeat	1	19	(0)	961514
19	21.7	1.8	1.8	chr12	117969235	117969289	(15306020)	+	(GCGA)n	Simple_repeat	1	56	(0)	961515
30	19.5	2.8	1.4	chr12	117969563	117969652	(15305657)	+	(GT)n	Simple_repeat	1	91	(0)	961516
72	15.0	4.0	1.3	chr12	118774705	118774855	(14500454)	+	GA-rich	Low_complexity	1	157	(0)	963330
315	25.0	7.7	1.8	chr12	118774909	118775018	(14500291)	C	L2b	LINE/L2	(15)	3360	3244	963331
225	25.6	7.9	0.0	chr12	119008578	119008659	(14266650)	+	MIR1_Amn	SINE/MIR	95	183	(47)	963806
21	23.1	0.0	0.0	chr12	119009049	119009099	(14266210)	+	(ACAC)n	Simple_repeat	1	51	(0)	963807
369	29.3	2.6	15.6	chr12	119302225	119302261	(13973048)	+	MIRb	SINE/MIR	203	233	(35)	964456
18	9.6	6.2	3.9	chr12	119302264	119302311	(13972998)	+	(ATGTGTT)n	Simple_repeat	1	51	(0)	964459
374	29.7	7.4	0.6	chr12	119309031	119309206	(13966103)	+	LTR104_Mam	LTR/Gypsy	969	1157	(352)	964475
12	17.6	0.0	5.6	chr12	119988991	119989026	(13286283)	+	(CGC)n	Simple_repeat	1	36	(0)	966004
517	13.3	5.1	0.0	chr12	120292742	120292816	(12982493)	+	AluYe5	SINE/Alu	212	290	(20)	966633
1329	1.4	0.0	0.0	chr12	120293094	120293237	(12982072)	C	U4	snRNA	(1)	144	1	966634
414	24.2	16.9	9.2	chr12	120437513	120437762	(12837547)	C	L2a	LINE/L2	(0)	3426	3154	967083
1724	15.0	2.0	1.0	chr12	121672182	121672481	(11602828)	+	AluJr	SINE/Alu	6	308	(4)	970009
35	0.0	2.8	0.0	chr12	121672749	121672784	(11602525)	+	(TTGTT)n	Simple_repeat	1	37	(0)	970010
1838	22.9	8.7	3.0	chr12	121718742	121719280	(11556029)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	23	970165
2465	8.4	0.3	0.0	chr12	122001046	122001355	(11273954)	C	AluSz	SINE/Alu	(1)	311	1	970872
2213	10.5	0.3	1.6	chr12	122182547	122182724	(11092585)	+	AluSx	SINE/Alu	137	311	(1)	971271
186	32.6	11.7	2.7	chr12	122182755	122182940	(11092369)	+	MIRb	SINE/MIR	13	217	(51)	971273
17	23.3	6.8	0.0	chr12	122752353	122752411	(10522898)	+	GA-rich	Low_complexity	1	63	(0)	972609
19	13.3	2.3	2.3	chr12	122966098	122966140	(10309169)	+	(GCTGCGG)n	Simple_repeat	1	44	(0)	973066
572	25.8	0.7	1.2	chr12	122974375	122974556	(10300753)	+	MIR	SINE/MIR	29	204	(26)	973092
25	25.9	3.6	3.5	chr12	123078017	123078128	(10197181)	+	GA-rich	Low_complexity	1	116	(0)	973267
34	23.6	6.7	1.9	chr12	123973003	123973151	(9302158)	+	G-rich	Low_complexity	1	159	(0)	975250
14	17.0	0.0	6.7	chr12	123973395	123973439	(9301870)	+	G-rich	Low_complexity	1	45	(0)	975251
19	4.3	0.0	0.0	chr12	124052019	124052042	(9223267)	+	(TG)n	Simple_repeat	1	24	(0)	975362
274	23.9	16.1	2.7	chr12	124187872	124187983	(9087326)	C	MIRb	SINE/MIR	(27)	241	112	975633
15	4.3	4.2	0.0	chr12	124528125	124528148	(8747161)	+	(ACC)n	Simple_repeat	1	25	(0)	976217
659	0.0	0.0	0.0	chr12	124939647	124939718	(8335591)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	977200
587	8.3	0.0	0.0	chr12	124939966	124940037	(8335272)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	977201
12	20.3	0.0	6.7	chr12	124993737	124993781	(8281528)	+	(GCCCCGC)n	Simple_repeat	1	45	(0)	977332
31	0.0	0.0	0.0	chr12	124993836	124993864	(8281445)	+	(CTG)n	Simple_repeat	1	29	(0)	977333
197	23.3	4.8	0.0	chr12	124994308	124994367	(8280942)	C	L2a	LINE/L2	(0)	3426	3364	977334
12	15.3	5.3	2.5	chr12	125684119	125684156	(7591153)	+	(CCTTTC)n	Simple_repeat	1	40	(0)	978564
3339	18.0	2.0	0.8	chr12	127592498	127593134	(5682175)	C	LTR9D	LTR/ERV1	(0)	645	1	981741
216	32.8	3.9	3.9	chr12	127593182	127593308	(5682001)	C	L2c	LINE/L2	(0)	3387	3261	981742
250	32.2	12.1	3.2	chr12	127722914	127723227	(5552082)	C	LTR33	LTR/ERVL	(0)	515	170	981951
281	19.6	22.7	2.1	chr12	127723338	127723431	(5551878)	C	MLT1K	LTR/ERVL-MaLR	(179)	416	298	981952
588	28.3	12.3	4.2	chr12	128617216	128617528	(4657781)	C	MLT1K	LTR/ERVL-MaLR	(128)	467	126	983516
39	21.6	3.4	5.2	chr12	128823828	128823975	(4451334)	+	(GCC)n	Simple_repeat	1	153	(0)	983925
1633	19.0	1.0	1.0	chr12	128824186	128824474	(4450835)	C	AluJr	SINE/Alu	(15)	297	9	983926
246	23.0	7.4	2.9	chr12	130818921	130819023	(2456286)	C	Arthur1C	DNA/hAT-Tip100	(0)	363	256	987255
14	14.5	3.2	0.0	chr12	130819306	130819336	(2455973)	+	(CCCT)n	Simple_repeat	1	32	(0)	987256
13	21.5	2.2	2.2	chr12	132144495	132144539	(1130770)	+	G-rich	Low_complexity	1	46	(0)	989133
1159	26.7	8.8	3.9	chr12	132427679	132428193	(847116)	C	MLT1F2	LTR/ERVL-MaLR	(10)	550	8	989444
355	24.4	20.8	0.0	chr12	132428200	132428408	(846901)	C	L2a	LINE/L2	(661)	2758	2495	989442
16	14.8	2.5	2.4	chr12	132543114	132543153	(732156)	+	(GTGACA)n	Simple_repeat	1	41	(0)	989578
273	31.4	11.8	3.5	chr12	132543158	132543358	(731951)	C	MIRb	SINE/MIR	(8)	260	41	989579
12	15.6	3.5	0.0	chr12	133130499	133130527	(144782)	+	(GTGT)n	Simple_repeat	1	30	(0)	990566
400	24.1	4.1	2.1	chr12	133181177	133181320	(93989)	C	L1MEg	LINE/L1	(4318)	1766	1620	990655
67	28.0	3.0	2.2	chr13	20704301	20704562	(93659766)	+	G-rich	Low_complexity	1	270	(0)	994732
14	15.0	10.9	1.6	chr13	26186524	26186578	(88177750)	+	(GCGCACA)n	Simple_repeat	1	61	(0)	1002856
2877	4.8	0.0	0.0	chr13	26186766	26187075	(88177253)	C	AluY	SINE/Alu	(0)	311	2	1002857
364	29.2	18.6	4.2	chr13	26972053	26972335	(87391993)	C	L2c	LINE/L2	(0)	3387	3055	1004085
19	0.0	0.0	0.0	chr13	27620497	27620520	(86743808)	+	(CGC)n	Simple_repeat	1	24	(0)	1005251
750	15.3	11.9	4.0	chr13	29497765	29497941	(84866387)	C	MER53	DNA/hAT	(0)	193	1	1008253
18	0.0	0.0	0.0	chr13	30307395	30307416	(84056912)	+	(GCC)n	Simple_repeat	1	22	(0)	1009431
367	36.5	3.0	0.0	chr13	30752815	30752973	(83611355)	C	MIRc	SINE/MIR	(87)	181	18	1010315
325	30.7	7.0	7.2	chr13	30752991	30753214	(83611114)	C	L2b	LINE/L2	(0)	3387	3183	1010316
43	0.0	0.0	0.0	chr13	31865614	31865650	(82498678)	+	(TG)n	Simple_repeat	1	37	(0)	1011939
12	7.7	3.2	6.2	chr13	34943295	34943325	(79421003)	+	(CTCCT)n	Simple_repeat	1	32	(0)	1016533
243	32.4	3.7	7.1	chr13	35014456	35014568	(79349760)	C	MIR3	SINE/MIR	(23)	185	77	1016647
22	7.3	0.0	0.0	chr13	35015128	35015156	(79349172)	+	(A)n	Simple_repeat	1	29	(0)	1016648
323	28.3	4.8	6.6	chr13	35621052	35621157	(78743171)	+	L2c	LINE/L2	3263	3366	(21)	1017375
427	19.6	13.3	1.4	chr13	35621173	35621317	(78743011)	+	L2a	LINE/L2	3262	3426	(0)	1017376
1206	26.1	4.5	1.4	chr13	35621317	35621678	(78742650)	+	L2a	LINE/L2	3053	3426	(0)	1017377
282	29.2	0.0	10.2	chr13	35621776	35621893	(78742435)	C	L2c	LINE/L2	(13)	3374	3269	1017378
14	10.0	6.2	0.0	chr13	37000762	37000793	(77363535)	+	(GCGCAG)n	Simple_repeat	1	34	(0)	1019397
470	19.8	3.0	0.0	chr13	43133071	43133166	(71231162)	+	MamSINE1	SINE/tRNA-RTE	20	118	(172)	1028463
15	15.9	2.9	0.0	chr13	43786684	43786718	(70577610)	+	(CGCGG)n	Simple_repeat	1	36	(0)	1029333
12	12.0	0.0	6.5	chr13	43786718	43786748	(70577580)	+	(CTC)n	Simple_repeat	1	31	(0)	1029334
17	34.5	0.0	0.0	chr13	43786939	43786994	(70577334)	+	(GC)n	Simple_repeat	1	56	(0)	1029335
63	13.9	4.1	0.0	chr13	43879726	43879847	(70484481)	+	(CGAGG)n	Simple_repeat	1	127	(0)	1029464
426	29.9	2.6	7.0	chr13	44426539	44426739	(69937589)	C	MER102c	DNA/hAT-Charlie	(7)	324	133	1030287
6261	15.4	0.4	1.0	chr13	48542097	48543077	(65821251)	+	LTR1D	LTR/ERV1	1	975	(0)	1036980
30	3.1	0.0	0.0	chr13	48976583	48976615	(65387713)	+	(CGGGGG)n	Simple_repeat	1	33	(0)	1037666
335	27.4	9.3	9.9	chr13	49937024	49937185	(64427143)	C	L1M4b	LINE/L1	(6252)	615	455	1039355
21	21.6	3.8	3.6	chr13	50843398	50843479	(63520849)	+	(CGCCCG)n	Simple_repeat	1	82	(0)	1040728
942	25.6	3.9	7.6	chr13	51614340	51614761	(62749567)	C	MLT1J	LTR/ERVL-MaLR	(6)	506	101	1041868
2267	8.7	0.0	3.5	chr13	52616906	52617215	(61747113)	+	AluSg	SINE/Alu	3	301	(9)	1043372
16	26.2	1.8	1.8	chr13	52847304	52847359	(61516969)	+	(GCG)n	Simple_repeat	1	57	(0)	1043780
1441	9.3	0.4	13.6	chr13	52968370	52968563	(61395765)	+	L1PB2	LINE/L1	5913	6087	(64)	1043977
7502	7.2	16.4	0.4	chr13	56735427	56736646	(57627682)	+	LTR12C	LTR/ERV1	3	1456	(123)	1048720
17016	12.4	2.2	2.6	chr13	57784177	57788027	(56576301)	C	L1PA10	LINE/L1	(2629)	3832	10	1049979
14	0.0	0.0	0.0	chr13	66110688	66110705	(48253623)	+	(AAT)n	Simple_repeat	1	18	(0)	1060630
548	37.1	3.7	1.4	chr13	66379055	66379267	(47985061)	+	MamRTE1	LINE/RTE-BovB	14	231	(3581)	1060961
299	38.4	3.5	6.3	chr13	70606881	70607327	(43757001)	+	L2a	LINE/L2	2975	3408	(18)	1066359
512	26.2	8.0	4.2	chr13	73879718	73879932	(40484396)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	1071212
288	30.9	9.7	1.8	chr13	73879933	73880159	(40484169)	+	L2c	LINE/L2	2951	3197	(190)	1071213
17	13.3	0.0	0.0	chr13	74134277	74134309	(40230019)	+	(GGGGCG)n	Simple_repeat	1	33	(0)	1071557
25	26.4	3.1	2.0	chr13	74134473	74134570	(40229758)	+	(CCCGC)n	Simple_repeat	1	101	(0)	1071558
20	16.2	0.0	2.3	chr13	75549747	75549789	(38814539)	+	(GGC)n	Simple_repeat	1	43	(0)	1073544
12	25.8	1.9	3.6	chr13	76992139	76992192	(37372136)	+	(GGCGCG)n	Simple_repeat	1	55	(0)	1075557
4349	29.3	7.9	5.7	chr13	77338311	77339076	(37025252)	+	ERV3-16A3_I-int	LTR/ERVL	4320	5133	(93)	1076048
1157	30.2	1.9	2.3	chr13	77339168	77339601	(37024727)	+	LTR16	LTR/ERVL	1	432	(6)	1076050
39	6.8	0.0	0.0	chr13	78603939	78603985	(35760343)	+	(TG)n	Simple_repeat	1	47	(0)	1077765
12	10.0	0.0	0.0	chr13	79481945	79481966	(34882362)	+	(GGGT)n	Simple_repeat	1	22	(0)	1079008
342	31.1	4.7	4.7	chr13	79796128	79796296	(34568032)	C	MIR3	SINE/MIR	(24)	184	16	1079431
234	23.1	5.8	1.5	chr13	84578761	84578826	(29785502)	+	Charlie2b	DNA/hAT-Charlie	1171	1239	(1543)	1085424
2333	10.8	13.6	0.8	chr13	84578832	84579222	(29785106)	+	LTR7	LTR/ERV1	1	449	(1)	1085425
2087	15.7	0.0	0.3	chr13	84579252	84579557	(29784771)	C	AluSz	SINE/Alu	(7)	305	1	1085426
240	18.0	3.2	3.2	chr13	98280149	98280211	(16084117)	+	L2	LINE/L2	2799	2861	(558)	1104432
325	30.2	5.8	2.3	chr13	98524308	98524439	(15839889)	+	MLT1H2	LTR/ERVL-MaLR	170	306	(243)	1104756
348	33.1	7.5	1.8	chr13	105758024	105758186	(8606142)	C	MLT1K	LTR/ERVL-MaLR	(403)	192	20	1115134
20	14.0	0.0	0.0	chr13	106373633	106373664	(7990664)	+	(CA)n	Simple_repeat	1	32	(0)	1115994
266	35.3	4.0	4.0	chr13	109583301	109583474	(4780854)	+	MamRTE1	LINE/RTE-BovB	3613	3786	(26)	1120242
402	28.8	2.7	2.0	chr13	109781053	109781201	(4583127)	C	MER5B	DNA/hAT-Charlie	(0)	178	29	1120494
583	27.9	1.1	1.6	chr13	109781214	109781399	(4582929)	+	MER5A	DNA/hAT-Charlie	5	189	(0)	1120495
17	14.6	4.1	3.9	chr13	110706167	110706215	(3658113)	+	(CACGCC)n	Simple_repeat	1	51	(0)	1121627
1401	21.8	10.0	0.5	chr13	112714768	112715173	(1649155)	C	L1MB3	LINE/L1	(3)	6180	5732	1123861
13	11.0	0.0	6.1	chr13	112734264	112734296	(1630032)	+	(GGCAGG)n	Simple_repeat	1	33	(0)	1123882
15	22.8	0.0	0.0	chr13	112969167	112969207	(1395121)	+	(CCGCCCC)n	Simple_repeat	1	41	(0)	1124105
22	19.4	0.0	0.0	chr13	113014482	113014528	(1349800)	+	(TCTC)n	Simple_repeat	1	47	(0)	1124130
13	15.6	2.0	7.8	chr13	113296931	113296980	(1067348)	+	(CTTCCT)n	Simple_repeat	1	51	(0)	1124474
2358	4.0	0.7	0.0	chr13	113363228	113363503	(1000825)	C	AluSx3	SINE/Alu	(32)	279	2	1124587
268	23.3	10.4	0.8	chr13	113489458	113489578	(874750)	+	L2	LINE/L2	2073	2206	(1213)	1124761
68	41.1	0.4	2.8	chr13	113557005	113557464	(806864)	+	(GT)n	Simple_repeat	1	462	(0)	1124853
245	13.9	10.2	3.7	chr13	113594826	113594907	(769421)	C	L1ME4a	LINE/L1	(3)	6121	6034	1124901
271	34.0	9.3	8.5	chr13	114145687	114146151	(218177)	+	L2a	LINE/L2	2797	3296	(130)	1125280
331	19.3	4.3	0.0	chr13	114150349	114150436	(213892)	C	MER5A	DNA/hAT-Charlie	(72)	117	26	1125284
302	26.9	6.3	1.9	chr13	114150442	114150547	(213781)	C	MER81	DNA/hAT-Blackjack	(0)	114	4	1125285
207	3.9	0.0	0.0	chr13	114150604	114150629	(213699)	C	MER5A	DNA/hAT-Charlie	(162)	27	2	1125284
2277	3.6	3.1	6.2	chr14	20342727	20343030	(86700688)	C	AluY	SINE/Alu	(17)	294	1	1127886
22	3.8	0.0	0.0	chr14	20343033	20343065	(86700653)	+	(T)n	Simple_repeat	1	33	(0)	1127887
657	1.4	0.0	0.0	chr14	20613399	20613472	(86430246)	C	tRNA-Pro-CCY	tRNA	(1)	74	1	1128342
183	19.1	0.0	14.6	chr14	20613590	20613644	(86430074)	C	OldhAT1	DNA/hAT-Ac	(1703)	1145	1099	1128343
463	15.1	2.3	5.5	chr14	20733282	20733372	(86310346)	+	THE1B	LTR/ERVL-MaLR	193	280	(84)	1128509
25	22.4	2.5	2.4	chr14	21092542	21092622	(85951096)	+	(GGCTGA)n	Simple_repeat	1	83	(0)	1129071
23	17.2	1.9	0.0	chr14	21092584	21092635	(85951083)	+	(GGCGGA)n	Simple_repeat	1	53	(0)	1129072
4354	11.5	1.1	0.5	chr14	21308566	21309205	(85734513)	C	LTR9B	LTR/ERV1	(0)	644	1	1129498
32	0.0	0.0	0.0	chr14	22883256	22883285	(84160433)	+	(GCACAC)n	Simple_repeat	1	30	(0)	1131891
17	20.5	0.0	0.0	chr14	22883292	22883331	(84160387)	+	(ACACGG)n	Simple_repeat	1	40	(0)	1131892
342	33.7	8.5	0.0	chr14	22887831	22888002	(84155716)	C	MIR3	SINE/MIR	(18)	190	3	1131900
663	1.4	0.0	0.0	chr14	22929701	22929773	(84113945)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	1131978
19	10.2	7.1	0.0	chr14	23306619	23306660	(83737058)	+	(AGCCC)n	Simple_repeat	1	45	(0)	1132674
36	16.6	1.4	0.0	chr14	23306778	23306847	(83736871)	+	(CCCT)n	Simple_repeat	1	71	(0)	1132675
455	27.8	10.4	3.4	chr14	23380197	23380375	(83663343)	C	MIR3	SINE/MIR	(11)	197	5	1132790
49	3.0	2.7	4.0	chr14	23551653	23551726	(83491992)	+	(CCT)n	Simple_repeat	1	76	(0)	1133023
1563	14.7	7.1	2.3	chr14	24078817	24079082	(82964636)	C	AluJr	SINE/Alu	(28)	284	5	1133713
14	30.3	3.2	4.2	chr14	24079582	24079674	(82964044)	+	GA-rich	Low_complexity	1	96	(0)	1133714
13	0.0	0.0	0.0	chr14	24079912	24079928	(82963790)	+	(TGG)n	Simple_repeat	1	17	(0)	1133715
344	36.1	4.0	11.4	chr14	24271824	24272443	(82771275)	+	L2	LINE/L2	1962	2533	(886)	1134000
16	0.0	0.0	0.0	chr14	24332238	24332254	(82711464)	+	(T)n	Simple_repeat	1	17	(0)	1134087
17	19.0	1.6	6.5	chr14	24369166	24369226	(82674492)	+	(CCCCAG)n	Simple_repeat	1	62	(0)	1134159
731	26.8	7.2	2.8	chr14	31922094	31922304	(75121414)	C	MamRep38	DNA/hAT	(2)	293	73	1144373
983	0.0	0.0	0.0	chr14	32203164	32203269	(74840449)	C	U6	snRNA	(1)	106	1	1144828
28	31.7	0.0	1.1	chr14	41608188	41608279	(65435439)	+	(GT)n	Simple_repeat	1	92	(0)	1158312
22	14.0	2.0	2.0	chr14	45083981	45084029	(61959689)	+	G-rich	Low_complexity	1	50	(0)	1162631
33	19.3	2.3	2.3	chr14	50668015	50668100	(56375618)	+	(CCG)n	Simple_repeat	1	88	(0)	1170319
14	29.8	0.0	3.3	chr14	50944096	50944156	(56099562)	+	(CCCGGC)n	Simple_repeat	1	61	(0)	1170724
16	29.8	1.6	0.0	chr14	51095108	51095183	(55948535)	+	(CCGCC)n	Simple_repeat	1	77	(0)	1170951
13	16.9	6.0	3.8	chr14	52553596	52553645	(54490073)	+	(GGCGCGG)n	Simple_repeat	1	53	(0)	1173110
12	9.8	0.0	0.0	chr14	52553808	52553829	(54489889)	+	(GTGA)n	Simple_repeat	1	22	(0)	1173111
24	20.0	0.0	0.0	chr14	57345591	57345636	(49698082)	+	(T)n	Simple_repeat	1	46	(0)	1180614
15	3.2	5.3	7.5	chr14	58151785	58151822	(48891896)	+	(GCTGGA)n	Simple_repeat	1	40	(0)	1181701
26	25.4	1.1	3.3	chr14	58152093	58152181	(48891537)	+	(GCG)n	Simple_repeat	1	90	(0)	1181702
22	17.3	0.0	0.0	chr14	60646608	60646646	(46397072)	+	A-rich	Low_complexity	1	39	(0)	1185328
12	20.4	4.1	3.9	chr14	60721600	60721648	(46322070)	+	G-rich	Low_complexity	1	51	(0)	1185455
12	19.3	0.0	10.3	chr14	61695436	61695493	(45348225)	+	(CCCTCC)n	Simple_repeat	1	58	(0)	1186912
17	31.6	0.0	1.5	chr14	65102710	65102725	(41940993)	+	(GGCGC)n	Simple_repeat	1	29	(37)	1192409
22	10.0	0.0	0.0	chr14	65102726	65102757	(41940961)	+	(G)n	Simple_repeat	1	32	(0)	1192410
17	31.6	0.0	1.5	chr14	65102758	65102775	(41940943)	+	(GGCGC)n	Simple_repeat	30	66	(0)	1192409
1279	27.1	8.6	2.4	chr14	66071095	66071770	(40971948)	+	L1ME3G	LINE/L1	3	533	(391)	1194103
1464	14.5	1.1	12.3	chr14	67654113	67654429	(39389289)	C	AluJo	SINE/Alu	(18)	294	14	1196489
26	23.4	0.0	0.0	chr14	69713800	69713855	(37329863)	+	(T)n	Simple_repeat	1	56	(0)	1200059
13	4.8	4.5	0.0	chr14	70809112	70809133	(36234585)	+	(CGG)n	Simple_repeat	1	23	(0)	1201775
16	11.2	0.0	3.2	chr14	70809198	70809228	(36234490)	+	(GCC)n	Simple_repeat	1	31	(0)	1201776
23	21.1	1.3	5.1	chr14	70907480	70907557	(36136161)	+	(GGCGGC)n	Simple_repeat	1	79	(0)	1201960
17	5.5	10.5	0.0	chr14	71932316	71932353	(35111365)	+	(GCCCAGGT)n	Simple_repeat	1	42	(0)	1203541
15	16.4	2.9	0.0	chr14	75660791	75660824	(31382894)	+	(CAG)n	Simple_repeat	1	35	(0)	1210879
16	22.1	0.0	0.0	chr14	75661105	75661136	(31382582)	+	A-rich	Low_complexity	1	32	(0)	1210880
13	24.7	5.7	0.0	chr14	76920741	76920793	(30122925)	+	G-rich	Low_complexity	1	56	(0)	1213205
243	28.9	8.6	3.0	chr14	77187039	77187202	(29856516)	C	MIRc	SINE/MIR	(60)	208	35	1213774
12	13.9	0.0	0.0	chr14	77616616	77616639	(29427079)	+	(GGC)n	Simple_repeat	1	24	(0)	1214576
20	14.6	0.0	0.0	chr14	77980957	77980994	(29062724)	+	(TGCGTG)n	Simple_repeat	1	38	(0)	1215412
25	0.0	0.0	0.0	chr14	77981450	77981476	(29062242)	+	(A)n	Simple_repeat	1	27	(0)	1215413
13	18.9	4.3	4.1	chr14	79279550	79279596	(27764122)	+	(TCC)n	Simple_repeat	1	49	(0)	1217535
7517	18.6	7.1	3.1	chr14	81169670	81171382	(25872336)	+	L1P4a	LINE/L1	23	1809	(4694)	1220221
29	0.0	0.0	3.1	chr14	81436222	81436253	(25607465)	+	(CCCGCC)n	Simple_repeat	1	32	(0)	1220623
2670	20.5	3.0	3.5	chr14	81682705	81683034	(25360684)	C	MER68	LTR/ERVL	(0)	563	230	1221024
2604	10.8	9.3	7.0	chr14	81683035	81683194	(25360524)	+	MER4A1	LTR/ERV1	1	175	(297)	1221025
363	21.9	0.2	1.2	chr14	84525396	84526194	(22517524)	+	(GTAG)n	Simple_repeat	1	801	(0)	1224900
424	24.0	10.7	4.4	chr14	84746685	84746866	(22296852)	+	Charlie2b	DNA/hAT-Charlie	2009	2203	(579)	1225215
1312	26.9	3.0	6.6	chr14	84746867	84747288	(22296430)	+	ERV3-16A3_LTR	LTR/ERVL	1	406	(16)	1225216
59	5.8	0.0	1.4	chr14	85309287	85309359	(21734359)	+	(GT)n	Simple_repeat	1	73	(0)	1226046
714	24.4	2.1	2.3	chr14	89254480	89254709	(17789009)	C	MER102a	DNA/hAT-Charlie	(118)	223	1	1231751
331	27.1	11.9	0.0	chr14	89384307	89384402	(17659316)	C	MIR3	SINE/MIR	(63)	145	37	1231972
14	7.2	6.9	0.0	chr14	90383484	90383512	(16660206)	+	(GCCCTC)n	Simple_repeat	1	31	(0)	1233809
241	27.7	12.5	4.0	chr14	91388274	91388397	(15655321)	+	MIR3	SINE/MIR	58	193	(15)	1235610
49	23.4	0.0	0.0	chr14	91836571	91836685	(15207033)	+	G-rich	Low_complexity	1	115	(0)	1236379
11	7.5	6.7	3.1	chr14	91836696	91836725	(15206993)	+	(CCTGCG)n	Simple_repeat	1	32	(0)	1236380
301	31.9	7.5	2.7	chr14	92959538	92959697	(14084021)	+	MIRb	SINE/MIR	15	183	(25)	1238568
219	28.7	8.7	0.0	chr14	93007067	93007160	(14036558)	C	MIR3	SINE/MIR	(24)	184	82	1238638
15	17.7	2.2	4.3	chr14	93939678	93939730	(13103988)	+	G-rich	Low_complexity	1	51	(0)	1240324
592	28.3	0.1	2.5	chr14	93939833	93940016	(13103702)	C	MIRb	SINE/MIR	(80)	188	4	1240325
486	32.0	5.5	0.9	chr14	93957466	93957689	(13086029)	+	MIRb	SINE/MIR	34	268	(0)	1240359
585	27.2	8.6	2.8	chr14	93970704	93970950	(13072768)	+	MIR	SINE/MIR	5	268	(0)	1240389
189	29.3	2.6	2.6	chr14	95182509	95182585	(11861133)	+	MamTip2	DNA/hAT-Tip100	28	104	(201)	1242554
384	30.0	11.8	8.1	chr14	95525563	95526081	(11517637)	+	L2b	LINE/L2	2353	2893	(526)	1243197
12	4.7	4.5	0.0	chr14	99533855	99533876	(7509842)	+	(AGGA)n	Simple_repeat	1	23	(0)	1250167
15	17.6	0.0	4.8	chr14	99604696	99604737	(7438981)	+	(CCCCGT)n	Simple_repeat	1	42	(0)	1250259
317	28.2	8.3	9.1	chr14	99682656	99683053	(7360665)	C	MamGypLTR3	LTR/Gypsy	(12)	882	488	1250427
269	28.2	12.0	1.7	chr14	99683172	99683290	(7360428)	C	MamGypLTR2b	LTR/Gypsy	(781)	141	9	1250428
264	28.9	7.5	0.0	chr14	100214710	100214844	(6828874)	C	MIR3	SINE/MIR	(52)	156	11	1251448
251	33.6	8.1	0.0	chr14	100321566	100321690	(6722028)	C	L3	LINE/CR1	(471)	3628	3493	1251666
505	24.2	6.5	0.7	chr14	100321723	100321875	(6721843)	C	MIR	SINE/MIR	(87)	181	26	1251667
366	32.6	13.3	0.9	chr14	100486864	100487080	(6556638)	C	L1ME4a	LINE/L1	(7)	6117	5870	1251940
1109	26.7	2.6	3.9	chr14	100783860	100784248	(6259470)	C	Charlie13b	DNA/hAT-Charlie	(79)	433	50	1252401
30	5.6	0.0	0.0	chr14	102928683	102928720	(4114998)	+	(GCGTG)n	Simple_repeat	1	38	(0)	1255915
37	0.0	0.0	0.0	chr14	103103798	103103829	(3939889)	+	(GT)n	Simple_repeat	1	32	(0)	1256203
456	28.3	0.9	0.0	chr14	103921710	103921822	(3121896)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	1257798
2196	7.7	0.0	0.0	chr14	103921941	103922226	(3121492)	C	AluSx1	SINE/Alu	(26)	286	1	1257799
15	26.5	4.8	0.0	chr14	104777262	104777324	(2266394)	+	(GGCACA)n	Simple_repeat	1	66	(0)	1258806
17	15.2	0.0	7.8	chr14	105167789	105167839	(1875879)	+	(GGCCCG)n	Simple_repeat	1	51	(0)	1259347
16	15.1	6.8	0.0	chr14	105181481	105181524	(1862194)	+	(GGCCG)n	Simple_repeat	1	47	(0)	1259359
2442	6.7	0.0	0.0	chr15	22838059	22838357	(79152832)	C	AluY	SINE/Alu	(12)	299	1	1266400
14	31.2	0.0	0.0	chr15	22838488	22838542	(79152647)	+	(CCCGCCC)n	Simple_repeat	1	55	(0)	1266401
4612	22.6	2.7	3.9	chr15	23538632	23539741	(78451448)	+	HERVL74-int	LTR/ERVL	2239	3335	(2350)	1267585
209	35.1	11.2	1.3	chr15	26235811	26235963	(75755226)	+	L2	LINE/L2	2720	2889	(530)	1271207
12	31.6	1.7	1.6	chr15	26773421	26773480	(75217709)	+	(CGG)n	Simple_repeat	1	61	(0)	1271881
13	26.5	2.1	7.4	chr15	28885742	28885834	(73105355)	+	G-rich	Low_complexity	1	95	(0)	1274695
26	9.6	2.2	0.0	chr15	28918608	28918652	(73072537)	+	(GTGGGG)n	Simple_repeat	1	46	(0)	1274737
26	3.1	3.0	0.0	chr15	29571111	29571143	(72420046)	+	(CGGGAGC)n	Simple_repeat	1	34	(0)	1275654
1046	21.9	19.6	0.5	chr15	29682250	29682647	(72308542)	+	MER66C	LTR/ERV1	61	540	(15)	1275866
475	34.4	7.5	5.6	chr15	29682682	29683125	(72308064)	C	L1M4	LINE/L1	(410)	5714	5262	1275867
33	0.0	0.0	0.0	chr15	29821834	29821864	(72169325)	+	(CCCGCGG)n	Simple_repeat	1	31	(0)	1276070
701	21.6	17.8	3.8	chr15	29919383	29919699	(72071490)	C	L2a	LINE/L2	(0)	3426	3056	1276236
18	29.9	3.7	2.7	chr15	30904028	30904134	(71087055)	+	(CGCGGC)n	Simple_repeat	1	111	(0)	1277837
14	13.3	9.5	0.0	chr15	31101481	31101522	(70889667)	+	(CCTGCA)n	Simple_repeat	1	46	(0)	1278090
20	2.8	8.3	0.0	chr15	31147989	31148024	(70843165)	+	(AAAAC)n	Simple_repeat	1	39	(0)	1278176
12	20.6	2.4	2.4	chr15	31295765	31295805	(70695384)	+	(GGATGGT)n	Simple_repeat	1	42	(0)	1278421
12	24.3	0.0	8.1	chr15	31328533	31328594	(70662595)	+	(TGCCC)n	Simple_repeat	1	62	(0)	1278467
413	31.3	7.4	5.8	chr15	31739881	31740226	(70250963)	C	L2a	LINE/L2	(24)	3402	3051	1278970
939	14.6	4.8	0.5	chr15	33956333	33956532	(68034657)	C	L1ME4b	LINE/L1	(632)	260	52	1282018
2014	7.7	0.0	0.4	chr15	34224529	34224776	(67766413)	C	AluSq2	SINE/Alu	(16)	297	51	1282509
14	18.2	2.6	2.5	chr15	34583543	34583581	(67407608)	+	(CCG)n	Simple_repeat	1	40	(0)	1283067
13	22.1	4.1	2.0	chr15	34755251	34755299	(67235890)	+	(AGGCGG)n	Simple_repeat	1	51	(0)	1283359
227	35.8	1.0	1.0	chr15	34799132	34799227	(67191962)	+	MER5A	DNA/hAT-Charlie	7	102	(87)	1283415
17	15.3	0.0	0.0	chr15	34970034	34970064	(67021125)	+	A-rich	Low_complexity	1	31	(0)	1283694
256	29.5	9.8	6.2	chr15	38817400	38817721	(63173468)	+	Plat_L3	LINE/CR1	3116	3450	(136)	1288880
199	32.3	16.8	0.8	chr15	39771575	39771699	(62219490)	C	MIRb	SINE/MIR	(0)	268	120	1290138
312	36.0	13.9	1.6	chr15	39771718	39771906	(62219283)	+	MamTip2	DNA/hAT-Tip100	2	217	(88)	1290139
2566	6.3	0.0	0.0	chr15	41402729	41403029	(60588160)	C	AluSg	SINE/Alu	(9)	301	1	1293269
14	20.2	0.0	0.0	chr15	41774508	41774541	(60216648)	+	(CTGCCG)n	Simple_repeat	1	34	(0)	1294072
17	17.4	3.0	7.2	chr15	41972413	41972419	(60018770)	+	(GCCC)n	Simple_repeat	1	20	(49)	1294334
14	22.1	4.3	0.0	chr15	41972420	41972466	(60018723)	+	(CGTCCG)n	Simple_repeat	1	49	(0)	1294335
17	17.4	3.0	7.2	chr15	41972467	41972479	(60018710)	+	(GCCC)n	Simple_repeat	21	69	(0)	1294334
530	22.4	15.3	1.4	chr15	43133302	43133514	(58857675)	C	MIRc	SINE/MIR	(17)	251	4	1296446
12	31.9	0.0	0.0	chr15	43133656	43133702	(58857487)	+	(GGCCCC)n	Simple_repeat	1	47	(0)	1296447
458	35.1	1.5	2.3	chr15	43510183	43510408	(58480781)	C	L3b	LINE/CR1	(136)	5096	4917	1297147
18	4.7	0.0	0.0	chr15	43510503	43510524	(58480665)	+	(A)n	Simple_repeat	1	22	(0)	1297148
15	25.1	3.5	1.7	chr15	43510525	43510558	(58480631)	+	(ACAA)n	Simple_repeat	3	60	(0)	1297149
553	32.0	8.1	3.3	chr15	44011518	44011879	(57979310)	C	L2a	LINE/L2	(1002)	2417	2037	1298031
19	21.6	1.6	4.6	chr15	44195183	44195246	(57795943)	+	(CCT)n	Simple_repeat	1	65	(0)	1298354
643	2.8	0.0	0.0	chr15	45200413	45200484	(56790705)	C	tRNA-His-CAY_	tRNA	(3)	72	1	1300219
502	29.3	5.1	3.5	chr15	47298852	47299056	(54692133)	C	MIRb	SINE/MIR	(0)	268	60	1303188
293	26.7	17.2	0.0	chr15	51750963	51751097	(50240092)	C	MIRb	SINE/MIR	(16)	252	90	1310018
14	23.8	2.8	5.5	chr15	52295645	52295715	(49695474)	+	G-rich	Low_complexity	1	73	(0)	1311056
14	14.8	1.9	9.1	chr15	52568729	52568782	(49422407)	+	(GCCTCG)n	Simple_repeat	1	55	(0)	1311518
15	9.5	8.8	0.0	chr15	55742852	55742885	(46248304)	+	(AGC)n	Simple_repeat	1	37	(0)	1316088
18	25.2	1.4	4.2	chr15	55743137	55743207	(46247982)	+	(CGG)n	Simple_repeat	1	72	(0)	1316089
241	27.2	4.2	4.2	chr15	62066674	62066769	(39924420)	C	MIRb	SINE/MIR	(50)	218	123	1326288
16	9.9	0.0	5.6	chr15	62390426	62390476	(39600713)	+	(GCCGC)n	Simple_repeat	1	48	(0)	1326828
14	22.0	2.0	3.9	chr15	62390511	62390561	(39600628)	+	(CGCGCT)n	Simple_repeat	1	52	(0)	1326829
17	23.3	0.0	0.0	chr15	62390560	62390604	(39600585)	+	(CGGCGG)n	Simple_repeat	1	45	(0)	1326830
510	21.2	6.6	0.0	chr15	62533997	62534109	(39457080)	C	MER5A1	DNA/hAT-Charlie	(0)	166	46	1327050
547	27.6	5.5	1.2	chr15	63093338	63093509	(38897680)	C	MIR	SINE/MIR	(0)	262	83	1327936
17	16.3	6.2	0.0	chr15	63504421	63504468	(38486721)	+	G-rich	Low_complexity	1	51	(0)	1328722
29	2.9	2.9	0.0	chr15	64703227	64703261	(37287928)	+	(GCC)n	Simple_repeat	1	36	(0)	1330988
216	36.4	3.2	1.6	chr15	64894292	64894414	(37096775)	C	MIRb	SINE/MIR	(29)	239	115	1331450
228	35.0	0.0	5.5	chr15	65979723	65979849	(36011340)	C	MIRc	SINE/MIR	(21)	247	128	1333738
15	21.9	2.3	0.0	chr15	66132429	66132471	(35858718)	+	(TGGAGCC)n	Simple_repeat	1	44	(0)	1334035
15	12.7	0.0	5.3	chr15	66293695	66293732	(35697457)	+	(CCGCAGC)n	Simple_repeat	1	38	(0)	1334370
23	23.0	3.2	4.2	chr15	66293740	66293832	(35697357)	+	G-rich	Low_complexity	1	96	(0)	1334371
11	20.6	5.1	0.0	chr15	67521309	67521347	(34469842)	+	(GCCCCGC)n	Simple_repeat	1	41	(0)	1336753
39	30.9	2.7	2.1	chr15	68229676	68229860	(33761329)	+	G-rich	Low_complexity	1	190	(0)	1337961
462	29.5	7.5	1.8	chr15	68550408	68550612	(33440577)	+	MIR	SINE/MIR	35	268	(0)	1338544
520	29.3	6.0	2.8	chr15	68658595	68658773	(33332416)	+	MIRb	SINE/MIR	50	234	(34)	1338778
624	22.1	6.2	4.7	chr15	69537775	69537964	(32453225)	C	MLT1K	LTR/ERVL-MaLR	(18)	577	385	1340432
1435	21.8	10.9	0.0	chr15	69538217	69538551	(32452638)	C	MER115	DNA/hAT-Tip100	(1)	692	317	1340433
190	18.3	3.2	7.7	chr15	70452500	70452564	(31538625)	C	MIRc	SINE/MIR	(127)	141	80	1342164
553	27.4	10.4	0.9	chr15	71750414	71750630	(30240559)	C	LTR89	LTR/ERVL?	(239)	640	401	1344290
295	18.3	6.8	3.5	chr15	71750765	71750849	(30240340)	C	LTR89	LTR/ERVL?	(786)	93	6	1344291
629	32.2	5.5	2.4	chr15	72273122	72273306	(29717883)	+	MIRb	SINE/MIR	8	202	(66)	1345171
19	6.3	2.9	2.8	chr15	72474428	72474462	(29516727)	+	(CCCT)n	Simple_repeat	1	36	(0)	1345546
21	19.5	3.3	1.6	chr15	72474519	72474578	(29516611)	+	(CGGAGC)n	Simple_repeat	1	62	(0)	1345547
16	19.4	1.7	6.6	chr15	73924656	73924716	(28066473)	+	(TCCC)n	Simple_repeat	1	58	(0)	1347950
387	34.6	5.7	1.7	chr15	74227089	74227268	(27763921)	C	MIRc	SINE/MIR	(66)	202	22	1348483
306	34.2	5.6	2.6	chr15	74227276	74227464	(27763725)	C	MamTip2	DNA/hAT-Tip100	(70)	235	41	1348484
16	8.2	0.0	0.0	chr15	74995619	74995644	(26995545)	+	(GCAGC)n	Simple_repeat	1	26	(0)	1349979
483	23.1	11.4	2.6	chr15	77346136	77346326	(24644863)	C	Eulor2B	DNA?	(50)	223	14	1353900
213	29.2	1.1	2.2	chr15	77543593	77543683	(24447506)	C	MIR1_Amn	SINE/MIR	(103)	127	38	1354239
16	28.6	1.3	3.9	chr15	78131451	78131527	(23859662)	+	(GGCACCC)n	Simple_repeat	1	78	(0)	1355268
184	30.4	8.2	0.7	chr15	78131757	78131902	(23859287)	+	MIR3	SINE/MIR	25	182	(26)	1355269
208	34.1	1.1	0.0	chr15	78638022	78638109	(23353080)	C	MIR1_Amn	SINE/MIR	(107)	123	35	1356316
386	26.1	4.0	0.0	chr15	78638346	78638464	(23352725)	C	MIR3	SINE/MIR	(34)	174	51	1356317
227	29.5	6.9	0.0	chr15	79635334	79635428	(22355761)	C	MIRb	SINE/MIR	(126)	142	41	1358140
12	16.8	6.3	8.3	chr15	80059481	80059559	(21931630)	+	(TCCGGCC)n	Simple_repeat	1	84	(0)	1358903
367	31.7	11.4	4.6	chr15	80059764	80059958	(21931231)	+	L1MDb	LINE/L1	552	761	(5648)	1358904
22	17.7	1.9	1.9	chr15	82046055	82046107	(19945082)	+	(CCCT)n	Simple_repeat	1	54	(0)	1362235
19	23.5	1.4	4.2	chr15	82046309	82046378	(19944811)	+	(CCGCCCC)n	Simple_repeat	1	71	(0)	1362236
19	17.7	0.0	10.3	chr15	82680391	82680468	(19310721)	+	G-rich	Low_complexity	1	78	(0)	1363260
17	16.3	0.0	0.0	chr15	83447375	83447409	(18543780)	+	(TGTGGC)n	Simple_repeat	1	35	(0)	1364645
15	7.2	0.0	8.6	chr15	83447577	83447629	(18543560)	+	G-rich	Low_complexity	1	48	(0)	1364646
2384	7.1	0.0	4.0	chr15	84630824	84631145	(17360044)	+	AluSg7	SINE/Alu	1	309	(0)	1366309
180	32.4	5.2	10.5	chr15	85168688	85168849	(16822340)	+	MER5A	DNA/hAT-Charlie	19	171	(18)	1367351
184	34.2	8.8	0.0	chr15	85168824	85168896	(16822293)	C	MIR	SINE/MIR	(78)	184	105	1367352
480	26.3	4.2	7.2	chr15	85828881	85829101	(16162088)	C	MLT1L	LTR/ERVL-MaLR	(396)	214	1	1368438
273	27.7	5.7	7.7	chr15	88894159	88894313	(13096876)	C	MIR3	SINE/MIR	(98)	170	19	1373211
669	0.0	0.0	0.0	chr15	89335073	89335145	(12656044)	+	tRNA-Arg-CGA_	tRNA	1	73	(3)	1374041
47	0.0	0.0	0.0	chr15	89389119	89389158	(12602031)	+	(GT)n	Simple_repeat	1	40	(0)	1374128
15	15.4	0.0	5.0	chr15	90957491	90957530	(11033659)	+	G-rich	Low_complexity	1	40	(0)	1377410
12	21.7	0.0	4.9	chr15	90994724	90994764	(10996425)	+	(TGGCC)n	Simple_repeat	1	41	(0)	1377487
15	12.8	2.8	2.7	chr15	93089225	93089260	(8901929)	+	(CCCGCC)n	Simple_repeat	1	37	(0)	1380971
27	13.8	2.4	8.1	chr15	93089302	93089386	(8901803)	+	G-rich	Low_complexity	1	87	(0)	1380972
924	17.0	1.2	0.0	chr15	99076991	99077161	(2914028)	+	MER5B	DNA/hAT-Charlie	1	173	(5)	1389581
3351	22.5	6.5	1.3	chr15	100832123	100833299	(1157890)	C	L1ME1	LINE/L1	(16)	6163	4920	1391982
22	10.4	0.0	4.4	chr16	352654	352698	(89985647)	+	(CCCGAG)n	Simple_repeat	1	45	(0)	1394626
13	16.1	2.1	6.2	chr16	352726	352772	(89985573)	+	G-rich	Low_complexity	1	48	(0)	1394627
12	17.9	3.1	0.0	chr16	353050	353081	(89985264)	+	G-rich	Low_complexity	1	33	(0)	1394628
348	30.0	10.8	2.8	chr16	383571	383824	(89954521)	+	L1ME4b	LINE/L1	572	848	(44)	1394654
28	3.0	0.0	2.8	chr16	579011	579046	(89759299)	+	(GGGGC)n	Simple_repeat	1	36	(0)	1394975
14	20.4	0.0	15.2	chr16	1539016	1539153	(88799192)	+	(CCTCAGG)n	Simple_repeat	1	138	(0)	1396061
12	19.4	6.1	5.7	chr16	1539131	1539196	(88799149)	+	(ACGGCCTC)n	Simple_repeat	1	70	(0)	1396062
17	13.7	0.0	0.0	chr16	1773265	1773296	(88565049)	+	(GCCGGG)n	Simple_repeat	1	32	(0)	1396373
13	30.4	0.0	0.0	chr16	1913482	1913526	(88424819)	+	(GGCAG)n	Simple_repeat	1	45	(0)	1396636
207	27.4	14.8	0.9	chr16	1959161	1959271	(88379074)	+	L2a	LINE/L2	3226	3405	(21)	1396715
242	27.9	17.2	0.9	chr16	1959282	1959393	(88378952)	+	L2a	LINE/L2	3267	3400	(26)	1396716
28	34.0	1.5	0.8	chr16	1983983	1984112	(88354233)	+	(CCGGCC)n	Simple_repeat	1	132	(0)	1396745
1884	9.3	10.3	0.0	chr16	2154373	2154642	(88183703)	+	AluSp	SINE/Alu	1	301	(12)	1396967
1707	15.0	3.1	3.1	chr16	2953504	2953636	(87384709)	C	AluJo	SINE/Alu	(175)	137	2	1398244
12	8.0	0.0	9.4	chr16	2963558	2963589	(87374756)	+	G-rich	Low_complexity	1	32	(0)	1398269
27	0.0	0.0	0.0	chr16	2965181	2965206	(87373139)	+	(GGGGC)n	Simple_repeat	1	26	(0)	1398270
13	8.8	0.0	12.8	chr16	3028306	3028352	(87309993)	+	(CCCGC)n	Simple_repeat	1	47	(0)	1398354
313	23.5	0.0	0.0	chr16	3057998	3058065	(87280280)	C	MER81	DNA/hAT-Blackjack	(46)	68	1	1398424
350	26.0	18.8	4.6	chr16	3860875	3860991	(86477354)	+	MIRb	SINE/MIR	3	150	(118)	1399935
2058	9.8	4.8	3.6	chr16	3860992	3861298	(86477047)	+	AluSq2	SINE/Alu	2	312	(1)	1399936
359	23.4	17.6	1.3	chr16	4254280	4254435	(86083910)	+	L1ME1	LINE/L1	5875	6061	(118)	1400766
252	27.7	1.7	5.2	chr16	4416964	4417106	(85921239)	C	MIR1_Amn	SINE/MIR	(96)	172	34	1401096
13	21.9	2.3	2.2	chr16	4476448	4476491	(85861854)	+	(GACAGGC)n	Simple_repeat	1	45	(0)	1401226
16	15.1	6.8	0.0	chr16	4694053	4694096	(85644249)	+	(GGCCTG)n	Simple_repeat	1	47	(0)	1401669
537	24.4	5.2	0.0	chr16	4801969	4802095	(85536250)	C	MIRb	SINE/MIR	(72)	196	63	1401914
313	37.3	1.8	0.0	chr16	4889914	4890023	(85448322)	C	L2b	LINE/L2	(1)	3374	3263	1402066
730	28.2	4.7	3.4	chr16	4957557	4957810	(85380535)	+	L2a	LINE/L2	3160	3425	(1)	1402239
1014	26.2	9.4	2.2	chr16	5034049	5034500	(85303845)	C	L1MC4	LINE/L1	(0)	8042	7555	1402426
687	23.2	10.2	0.5	chr16	10678969	10679189	(79659156)	+	MIR	SINE/MIR	15	259	(3)	1414020
671	16.8	25.8	0.0	chr16	10728358	10728512	(79609833)	+	MER3	DNA/hAT-Charlie	1	209	(0)	1414085
484	31.3	0.0	2.6	chr16	11050877	11051030	(79287315)	+	MIRb	SINE/MIR	4	153	(115)	1414818
332	30.3	1.6	1.2	chr16	11224051	11224193	(79114152)	C	MIRb	SINE/MIR	(79)	189	45	1415154
21	30.8	0.0	0.0	chr16	11742653	11742720	(78595625)	+	(GCC)n	Simple_repeat	1	68	(0)	1416395
479	20.0	2.2	0.0	chr16	12340390	12340479	(77997866)	+	L2a	LINE/L2	3303	3394	(32)	1417723
708	30.7	7.0	4.0	chr16	12340553	12340964	(77997381)	+	LTR86B2	LTR/ERVL	57	481	(6)	1417724
19	19.7	0.0	2.1	chr16	12803887	12803934	(77534411)	+	G-rich	Low_complexity	1	48	(0)	1418653
646	18.5	5.6	7.2	chr16	12804069	12804249	(77534096)	+	MER53	DNA/hAT	2	179	(14)	1418654
34	24.6	2.0	1.9	chr16	12868576	12868677	(77469668)	+	(CTTC)n	Simple_repeat	1	104	(0)	1418837
13	19.8	6.3	4.5	chr16	12901422	12901484	(77436861)	+	(GCTC)n	Simple_repeat	1	67	(0)	1418920
24	24.0	1.0	6.0	chr16	12901496	12901595	(77436750)	+	(TCCCCC)n	Simple_repeat	1	95	(0)	1418921
401	30.8	5.4	4.1	chr16	14070771	14070990	(76267355)	+	MIRb	SINE/MIR	15	237	(31)	1421470
31	13.4	0.0	3.3	chr16	14071327	14071387	(76266958)	+	(GCG)n	Simple_repeat	1	61	(0)	1421471
610	1.4	0.0	0.0	chr16	14285893	14285964	(76052381)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1421772
188	27.0	13.8	2.0	chr16	14633510	14633611	(75704734)	C	MIRc	SINE/MIR	(114)	154	39	1422540
2345	8.3	0.7	0.7	chr16	18790551	18790839	(71547506)	C	AluSc	SINE/Alu	(14)	295	7	1431958
13	22.5	2.0	3.9	chr16	21278385	21278434	(69059911)	+	(CCCCG)n	Simple_repeat	1	51	(0)	1437565
394	30.9	9.3	1.8	chr16	22189369	22189536	(68148809)	+	MIR	SINE/MIR	81	262	(0)	1439493
14	21.5	2.2	2.2	chr16	22206227	22206271	(68132074)	+	(CGCCC)n	Simple_repeat	1	46	(0)	1439529
734	0.0	0.0	0.0	chr16	22297140	22297221	(68041124)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1439785
2219	8.5	2.4	1.4	chr16	23695454	23695747	(66642598)	+	AluSz	SINE/Alu	11	307	(5)	1442879
197	19.2	3.7	7.1	chr16	25258549	25258604	(65079741)	C	L2a	LINE/L2	(24)	3402	3349	1446591
837	23.7	2.3	3.6	chr16	25258623	25258796	(65079549)	C	LTR73	LTR/ERV1	(18)	554	383	1446592
45	9.5	3.2	1.0	chr16	27854624	27854716	(62483629)	+	(TGTCCACCTG)n	Simple_repeat	1	96	(0)	1452064
1810	19.4	1.9	6.2	chr16	27945097	27945302	(62393043)	+	L1MB8	LINE/L1	5973	6173	(5)	1452293
16	18.9	2.4	0.0	chr16	28212035	28212076	(62126269)	+	G-rich	Low_complexity	1	43	(0)	1452865
190	16.5	22.9	2.1	chr16	28212245	28212337	(62126008)	C	L2a	LINE/L2	(3)	3423	3306	1452866
190	27.1	11.4	0.0	chr16	28212334	28212403	(62125942)	C	L2b	LINE/L2	(0)	3375	3297	1452867
15	25.6	1.4	5.5	chr16	28924715	28924786	(61413559)	+	(GCCCCT)n	Simple_repeat	1	73	(0)	1454762
18	37.2	0.0	0.0	chr16	30011140	30011212	(60327133)	+	(GC)n	Simple_repeat	1	73	(0)	1457057
15	27.5	0.0	0.0	chr16	30011439	30011488	(60326857)	+	(CCCCCG)n	Simple_repeat	1	50	(0)	1457058
2516	6.9	0.0	0.0	chr16	31095050	31095354	(59242991)	+	AluSx	SINE/Alu	1	305	(7)	1459584
12	14.1	3.5	10.0	chr16	31117897	31117954	(59220391)	+	G-rich	Low_complexity	1	60	(0)	1459640
26	0.0	0.0	0.0	chr16	49000744	49000768	(41337577)	+	(T)n	Simple_repeat	1	25	(0)	1469806
422	26.1	13.9	0.0	chr16	49593003	49593163	(40745182)	C	MamTip3	DNA/hAT-Tip100	(51)	449	263	1470780
1938	12.9	4.5	0.7	chr16	49593170	49593447	(40744898)	+	AluJr	SINE/Alu	7	295	(17)	1470781
415	29.9	10.2	2.5	chr16	49922180	49922495	(40415850)	C	MamRep4096	DNA/hAT-Tip100	(56)	370	28	1471388
311	25.9	6.3	2.1	chr16	50281214	50281354	(40056991)	C	MIR3	SINE/MIR	(35)	173	24	1472197
188	34.3	0.0	8.1	chr16	50653982	50654092	(39684253)	+	L2b	LINE/L2	3259	3360	(15)	1472924
13	18.1	2.0	6.0	chr16	50742150	50742198	(39596147)	+	G-rich	Low_complexity	1	50	(0)	1473097
296	25.5	9.6	1.1	chr16	52405422	52405516	(37932829)	C	MLT1K	LTR/ERVL-MaLR	(482)	113	10	1475960
14	18.3	2.7	0.0	chr16	53099565	53099601	(37238744)	+	(TCCTTCC)n	Simple_repeat	1	38	(0)	1477231
18	17.6	3.6	3.5	chr16	53502830	53502884	(36835461)	+	G-rich	Low_complexity	1	57	(0)	1477950
14	15.3	2.6	2.6	chr16	53502905	53502942	(36835403)	+	(CCAGCC)n	Simple_repeat	1	39	(0)	1477951
13	20.4	0.0	7.7	chr16	53503207	53503258	(36835087)	+	(CCCGC)n	Simple_repeat	1	52	(0)	1477952
12	28.7	0.0	2.1	chr16	56194521	56194568	(34143777)	+	(GGCTC)n	Simple_repeat	1	48	(0)	1482665
15	3.8	0.0	9.1	chr16	56730007	56730039	(33608306)	+	(GCCCC)n	Simple_repeat	1	33	(0)	1483652
625	8.4	0.0	0.0	chr16	57299951	57300033	(33038312)	+	tRNA-Leu-CTG	tRNA	1	83	(3)	1484766
358	19.7	10.2	0.8	chr16	57300190	57300285	(33038060)	+	AluJb	SINE/Alu	209	293	(9)	1484767
182	32.9	2.8	0.0	chr16	57798837	57798906	(32539439)	C	L2c	LINE/L2	(0)	3426	3355	1485771
207	33.3	0.0	4.9	chr16	57799190	57799271	(32539074)	C	L2c	LINE/L2	(4)	3383	3306	1485771
21	20.2	0.0	4.8	chr16	58025806	58025867	(32312478)	+	(CGCT)n	Simple_repeat	1	62	(0)	1486285
544	28.7	9.7	3.9	chr16	58236215	58236696	(32101649)	C	LTR33	LTR/ERVL	(2)	513	1	1486703
239	25.0	1.4	2.7	chr16	58331635	58331708	(32006637)	C	MER5B	DNA/hAT-Charlie	(60)	118	46	1486882
243	12.7	8.7	6.0	chr16	58331718	58331784	(32006561)	C	L1MB5	LINE/L1	(0)	6174	6106	1486883
242	8.6	0.0	0.0	chr16	58331754	58331788	(32006557)	C	L1MB5	LINE/L1	(1)	6173	6139	1486884
962	19.4	5.7	0.4	chr16	59690037	59690269	(30648076)	C	L1MA8	LINE/L1	(4)	6287	6042	1489224
21	22.6	0.0	0.0	chr16	61005930	61005972	(29332373)	+	(TG)n	Simple_repeat	1	43	(0)	1491199
13	21.7	0.0	2.6	chr16	66512131	66512169	(23826176)	+	(GGAGCAG)n	Simple_repeat	1	39	(0)	1499872
695	20.5	0.0	0.0	chr16	66512282	66512393	(23825952)	+	AluJo	SINE/Alu	2	113	(199)	1499873
206	24.1	12.6	2.4	chr16	66695838	66695922	(23642423)	C	L2a	LINE/L2	(5)	3421	3327	1500227
206	28.6	6.7	0.0	chr16	67018005	67018060	(23320285)	C	MER91C	DNA/hAT-Tip100	(30)	110	51	1500889
13	26.6	0.0	0.0	chr16	67109951	67109987	(23228358)	+	(CCG)n	Simple_repeat	1	37	(0)	1501116
19	7.0	0.0	0.0	chr16	67109988	67110017	(23228328)	+	(AGGTG)n	Simple_repeat	1	30	(0)	1501117
21	22.3	4.4	4.3	chr16	67326772	67326861	(23011484)	+	(GGCG)n	Simple_repeat	1	94	(0)	1501441
2040	8.9	6.4	0.0	chr16	67327232	67327522	(23010823)	+	AluSx	SINE/Alu	2	312	(0)	1501442
12	25.5	0.0	0.0	chr16	67563295	67563331	(22775014)	+	(CCTG)n	Simple_repeat	1	37	(0)	1501894
14	14.4	5.0	2.4	chr16	68520940	68520979	(21817366)	+	(CAGGCC)n	Simple_repeat	1	42	(0)	1503687
15	27.2	0.0	3.5	chr16	68737345	68737401	(21600944)	+	(CCGGC)n	Simple_repeat	1	57	(0)	1504212
13	0.0	0.0	0.0	chr16	68737445	68737461	(21600884)	+	(GCT)n	Simple_repeat	1	17	(0)	1504213
757	19.6	0.0	0.8	chr16	69755186	69755318	(20583027)	+	FLAM_A	SINE/Alu	1	132	(10)	1506494
249	25.9	4.5	2.3	chr16	69762042	69762128	(20576217)	+	MIR	SINE/MIR	102	190	(72)	1506513
2355	6.9	1.9	0.0	chr16	70346334	70346636	(19991709)	+	AluSg	SINE/Alu	1	309	(1)	1507781
1715	22.4	13.2	4.4	chr16	71462484	71463159	(18875186)	C	MER20B	DNA/hAT-Charlie	(15)	768	25	1509731
39	2.3	2.3	0.0	chr16	71809207	71809250	(18529095)	+	(GGGGGTAG)n	Simple_repeat	1	45	(0)	1510412
235	11.1	0.0	2.7	chr16	74775171	74775207	(15563138)	C	MER96B	DNA/hAT	(18)	399	364	1515418
11	14.8	4.9	4.7	chr16	74813188	74813228	(15525117)	+	G-rich	Low_complexity	1	43	(0)	1515494
16	15.3	2.0	6.0	chr16	77212374	77212422	(13125923)	+	G-rich	Low_complexity	1	50	(0)	1519452
1632	20.3	1.3	0.3	chr16	78100245	78100550	(12237795)	C	AluJo	SINE/Alu	(3)	309	1	1521130
13	17.6	0.0	6.8	chr16	79770540	79770583	(10567762)	+	(CCCGC)n	Simple_repeat	1	44	(0)	1524122
18	15.5	0.0	0.0	chr16	79770586	79770615	(10567730)	+	A-rich	Low_complexity	1	30	(0)	1524123
27	27.6	1.9	2.8	chr16	81035818	81035922	(9302423)	+	(GGC)n	Simple_repeat	1	107	(0)	1526357
394	35.0	3.7	3.2	chr16	81493307	81493495	(8844850)	+	MIR	SINE/MIR	45	234	(28)	1527387
236	32.8	6.9	4.8	chr16	81695171	81695481	(8642864)	+	Charlie30a	DNA/hAT-Charlie	437	754	(37)	1527788
184	27.1	13.7	6.1	chr16	81730244	81730357	(8607988)	+	MamTip2	DNA/hAT-Tip100	182	305	(0)	1527883
183	24.2	8.3	1.5	chr16	81883656	81883722	(8454623)	+	L2c	LINE/L2	3089	3160	(227)	1528261
350	35.8	2.4	1.2	chr16	83455034	83455197	(6883148)	C	MIR	SINE/MIR	(66)	196	31	1531032
14	22.7	4.3	0.0	chr16	84648785	84648830	(5689515)	+	G-rich	Low_complexity	1	48	(0)	1533298
12	19.3	0.0	5.1	chr16	84648897	84648935	(5689410)	+	(CCCCG)n	Simple_repeat	1	39	(0)	1533299
266	20.0	0.0	3.5	chr16	84843817	84843873	(5494472)	+	MIRc	SINE/MIR	76	130	(138)	1533684
180	28.6	13.3	0.0	chr16	85010976	85011066	(5327279)	C	MIR3	SINE/MIR	(58)	150	46	1534007
18	25.4	1.4	4.2	chr16	85011296	85011366	(5326979)	+	(GGC)n	Simple_repeat	1	72	(0)	1534008
265	32.2	3.4	0.9	chr16	85167032	85167147	(5171198)	C	MIRb	SINE/MIR	(114)	154	36	1534318
211	30.5	12.5	9.3	chr16	85167132	85167431	(5170914)	C	L2b	LINE/L2	(36)	3339	3029	1534319
269	35.8	3.5	4.6	chr16	85233962	85234134	(5104211)	C	MER5A	DNA/hAT-Charlie	(6)	183	13	1534449
473	31.2	8.1	1.4	chr16	85303486	85303701	(5034644)	C	MIRb	SINE/MIR	(13)	255	21	1534591
12	14.4	4.8	4.5	chr16	85397513	85397554	(4940791)	+	(CCTCTG)n	Simple_repeat	1	44	(0)	1534771
268	32.7	18.4	2.3	chr16	85460459	85461025	(4877320)	+	L3	LINE/CR1	3282	3960	(139)	1534884
276	25.9	8.0	0.0	chr16	85542322	85542402	(4795943)	C	MIR3	SINE/MIR	(9)	199	112	1535027
434	29.9	4.0	0.7	chr16	85559624	85559768	(4778577)	+	MIR	SINE/MIR	33	182	(80)	1535057
541	20.5	9.6	3.8	chr16	85559798	85559954	(4778391)	+	MER58A	DNA/hAT-Charlie	53	219	(5)	1535058
21	3.7	0.0	0.0	chr16	85563163	85563190	(4775155)	+	(TCC)n	Simple_repeat	1	28	(0)	1535064
16	5.3	0.0	0.0	chr16	85563190	85563209	(4775136)	+	(T)n	Simple_repeat	1	20	(0)	1535065
216	28.7	15.4	4.0	chr16	85608640	85608788	(4729557)	+	MIRb	SINE/MIR	89	257	(11)	1535138
947	15.4	3.4	0.0	chr16	85609258	85609400	(4728945)	C	AluJo	SINE/Alu	(31)	281	134	1535139
27	0.0	0.0	0.0	chr16	85611307	85611332	(4727013)	+	(CCCCTC)n	Simple_repeat	1	26	(0)	1535143
318	22.9	7.9	0.9	chr16	85821248	85821353	(4516992)	+	MER5A	DNA/hAT-Charlie	44	157	(32)	1535509
225	32.2	2.9	0.0	chr16	86555365	86555456	(3782889)	C	L2a	LINE/L2	(2)	3424	3277	1536837
1170	16.9	14.7	0.0	chr16	87384639	87384881	(2953464)	+	AluJr	SINE/Alu	20	304	(8)	1538341
1240	16.7	0.0	4.4	chr16	87384893	87385120	(2953225)	+	AluSx	SINE/Alu	1	218	(94)	1538342
765	16.0	1.4	5.6	chr16	87461986	87462129	(2876216)	+	FLAM_C	SINE/Alu	1	138	(5)	1538455
2171	6.4	0.7	0.7	chr16	87950441	87950735	(2387610)	C	AluSx1	SINE/Alu	(17)	295	1	1539392
25	16.6	0.0	0.0	chr16	88443416	88443463	(1894882)	+	(ACGC)n	Simple_repeat	1	48	(0)	1539966
338	28.9	3.0	0.0	chr16	88481967	88482063	(1856282)	C	MIR	SINE/MIR	(96)	166	67	1540018
11	9.1	2.3	11.1	chr16	88663355	88663398	(1674947)	+	(GGCGTC)n	Simple_repeat	1	45	(0)	1540289
15	23.0	0.0	5.4	chr16	89167665	89167720	(1170625)	+	(GCCCCCA)n	Simple_repeat	1	56	(0)	1540854
359	34.0	12.8	1.9	chr16	89699978	89700193	(638152)	C	MIRb	SINE/MIR	(13)	255	13	1541695
12	22.0	2.7	0.0	chr16	89701916	89701952	(636393)	+	G-rich	Low_complexity	1	38	(0)	1541697
13	23.5	1.8	5.4	chr16	89972927	89972981	(365364)	+	(CCT)n	Simple_repeat	1	56	(0)	1542179
16	20.2	2.1	2.1	chr16	90019460	90019506	(318839)	+	G-rich	Low_complexity	1	48	(0)	1542241
358	31.8	3.2	0.1	chr17	182884	183037	(83074404)	+	MIRb	SINE/MIR	55	214	(48)	1544741
344	28.9	5.2	5.9	chr17	301824	301959	(82955482)	+	MIRc	SINE/MIR	80	214	(54)	1544951
184	35.0	9.9	2.0	chr17	302220	302321	(82955120)	C	MIR3	SINE/MIR	(35)	173	63	1544952
285	17.0	0.0	0.0	chr17	1162694	1162740	(82094701)	+	Alu	SINE/Alu	1	47	(86)	1546476
225	21.3	0.0	0.0	chr17	1162743	1162789	(82094652)	+	Alu	SINE/Alu	1	47	(86)	1546477
2235	10.7	0.0	0.0	chr17	1162792	1163082	(82094359)	+	AluSx4	SINE/Alu	1	291	(19)	1546478
13	27.9	0.0	0.0	chr17	1487508	1487550	(81769891)	+	(GAGCGG)n	Simple_repeat	1	43	(0)	1547236
227	26.6	18.6	0.0	chr17	1490874	1491016	(81766425)	+	L2c	LINE/L2	3028	3198	(177)	1547242
2289	7.9	4.0	0.0	chr17	1720495	1720786	(81536655)	+	AluSx	SINE/Alu	1	304	(8)	1547664
268	10.5	0.0	0.0	chr17	1721156	1721193	(81536248)	+	AluYk11	SINE/Alu	1	38	(273)	1547665
12	23.9	6.0	0.0	chr17	2023849	2023898	(81233543)	+	(GCCGCA)n	Simple_repeat	1	53	(0)	1548314
12	22.5	3.9	7.4	chr17	2303520	2303559	(80953882)	+	G-rich	Low_complexity	1	68	(13)	1548855
15	17.7	0.0	0.0	chr17	2303560	2303591	(80953850)	+	GA-rich	Low_complexity	1	32	(0)	1548856
736	20.8	0.0	0.0	chr17	2347642	2347766	(80909675)	C	FLAM_A	SINE/Alu	(10)	132	8	1548952
208	36.0	0.0	3.5	chr17	2734851	2734965	(80522476)	+	MIRc	SINE/MIR	105	215	(53)	1549809
61	0.0	0.0	0.0	chr17	2801598	2801649	(80455792)	+	(TG)n	Simple_repeat	1	52	(0)	1549976
397	28.2	2.2	0.8	chr17	2801946	2802077	(80455364)	C	MamGypLTR1c	LTR/Gypsy	(669)	134	1	1549977
271	26.1	5.1	5.1	chr17	2828430	2828546	(80428895)	C	L2a	LINE/L2	(284)	3142	3026	1550047
2270	10.5	0.3	1.3	chr17	2848499	2848813	(80408628)	C	AluSx1	SINE/Alu	(0)	312	1	1550096
13	21.2	2.6	0.0	chr17	2848872	2848925	(80408516)	+	(CCCTTCC)n	Simple_repeat	1	55	(0)	1550097
1813	21.0	8.3	9.0	chr17	2859736	2860008	(80397433)	C	L1MC5	LINE/L1	(450)	8854	8566	1550114
359	30.6	11.2	2.8	chr17	2864330	2864581	(80392860)	+	MER102a	DNA/hAT-Charlie	34	309	(21)	1550128
757	16.7	0.0	1.7	chr17	3863592	3863711	(79393730)	+	AluJr	SINE/Alu	1	118	(194)	1551896
2165	11.0	1.7	0.0	chr17	3863950	3864241	(79393200)	C	AluJr	SINE/Alu	(9)	303	7	1551897
463	30.8	9.9	6.0	chr17	3879235	3879858	(79377583)	+	L2b	LINE/L2	2658	3314	(61)	1551927
2296	8.8	0.3	0.0	chr17	3905593	3905877	(79351564)	+	AluSq2	SINE/Alu	28	313	(0)	1551976
12	17.7	5.0	2.4	chr17	4584940	4584979	(78672462)	+	(CGCCA)n	Simple_repeat	1	42	(0)	1553355
12	15.8	0.0	3.3	chr17	4882197	4882226	(78375215)	+	(CTCCT)n	Simple_repeat	1	30	(0)	1553990
2364	7.1	0.3	2.2	chr17	4888689	4888999	(78368442)	C	AluSp	SINE/Alu	(8)	305	1	1554001
12	5.5	0.0	0.0	chr17	4889110	4889128	(78368313)	+	(TGG)n	Simple_repeat	1	19	(0)	1554002
2520	6.0	0.3	1.0	chr17	5469177	5469490	(77787951)	C	AluSp	SINE/Alu	(1)	312	1	1555203
31	9.8	0.0	0.0	chr17	6544656	6544699	(76712742)	+	(AC)n	Simple_repeat	1	44	(0)	1557296
36	5.2	0.0	0.0	chr17	6544848	6544887	(76712554)	+	(CA)n	Simple_repeat	1	40	(0)	1557297
605	28.3	5.7	1.0	chr17	6545072	6545271	(76712170)	+	MIR	SINE/MIR	39	248	(14)	1557298
17	13.3	0.0	0.0	chr17	7394190	7394222	(75863219)	+	(AGACAG)n	Simple_repeat	1	33	(0)	1558757
14	12.8	0.0	7.5	chr17	7394560	7394599	(75862842)	+	(CCCCGC)n	Simple_repeat	1	40	(0)	1558758
12	16.8	0.0	5.4	chr17	7887462	7887498	(75369943)	+	G-rich	Low_complexity	1	37	(0)	1559704
16	13.5	0.0	8.3	chr17	7887728	7887775	(75369666)	+	(CTCCGCC)n	Simple_repeat	1	48	(0)	1559705
14	24.1	0.0	0.0	chr17	7990074	7990112	(75267329)	+	G-rich	Low_complexity	1	39	(0)	1559894
683	17.7	0.0	8.4	chr17	8079196	8079295	(75178146)	+	MER2B	DNA/TcMar-Tigger	243	336	(0)	1560050
3368	26.6	10.9	4.8	chr17	8138308	8138688	(75118753)	C	L2a	LINE/L2	(1677)	1742	1320	1560160
779	1.2	0.0	0.0	chr17	8138878	8138962	(75118479)	C	tRNA-Ser-TCG	tRNA	(0)	85	1	1560170
13	0.0	14.3	0.0	chr17	8139020	8139047	(75118394)	+	(CCGGCT)n	Simple_repeat	1	32	(0)	1560171
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
678	0.0	0.0	0.0	chr17	8187593	8187666	(75069775)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	1560266
652	1.4	0.0	0.0	chr17	8222831	8222904	(75034537)	C	tRNA-Pro-CCG	tRNA	(1)	74	1	1560361
14	29.6	0.0	3.3	chr17	8746014	8746074	(74511367)	+	G-rich	Low_complexity	1	61	(0)	1561384
12	7.4	0.0	11.1	chr17	9645481	9645516	(73611925)	+	(GCCCC)n	Simple_repeat	1	36	(0)	1563113
409	22.5	20.4	1.5	chr17	10171684	10171881	(73085560)	+	MIRc	SINE/MIR	4	250	(18)	1564182
315	24.6	14.1	3.6	chr17	10172438	10172576	(73084865)	+	L1MCa	LINE/L1	1143	1298	(5210)	1564183
260	27.9	1.2	0.0	chr17	17028637	17028715	(66228726)	+	MIRc	SINE/MIR	58	137	(131)	1575972
311	34.3	2.9	0.7	chr17	17028813	17028947	(66228494)	C	L2a	LINE/L2	(0)	3426	3289	1575973
2384	10.2	0.3	0.0	chr17	17223089	17223392	(66034049)	C	AluSx	SINE/Alu	(7)	305	1	1576213
263	18.9	0.0	0.0	chr17	17385410	17385462	(65871979)	C	L1MB5	LINE/L1	(0)	6183	6131	1576570
938	17.2	4.2	0.5	chr17	17691138	17691341	(65566100)	+	MER20	DNA/hAT-Charlie	1	212	(7)	1577173
236	36.5	9.9	2.1	chr17	17691349	17691628	(65565813)	C	L2a	LINE/L2	(61)	3365	3062	1577174
17	22.1	0.0	0.0	chr17	17700621	17700662	(65556779)	+	GA-rich	Low_complexity	1	42	(0)	1577188
258	31.0	9.4	0.8	chr17	17740564	17740680	(65516761)	C	MIRc	SINE/MIR	(135)	133	6	1577255
12	22.5	3.5	5.1	chr17	17740943	17740999	(65516442)	+	G-rich	Low_complexity	1	59	(0)	1577256
12	8.9	4.2	0.0	chr17	17783342	17783365	(65474076)	+	(GGC)n	Simple_repeat	1	25	(0)	1577346
14	27.1	1.4	5.4	chr17	17783638	17783710	(65473731)	+	(GCCCGC)n	Simple_repeat	1	74	(0)	1577347
284	29.3	6.5	0.8	chr17	18260082	18260198	(64997243)	C	MIRc	SINE/MIR	(81)	187	64	1578239
12	18.8	2.6	2.6	chr17	19867221	19867258	(63390183)	+	(GCGGCTC)n	Simple_repeat	1	39	(0)	1581428
874	29.7	7.1	3.0	chr17	21453441	21453940	(61803501)	+	MER90a	LTR/ERV1	70	591	(23)	1584293
18	6.8	3.2	0.0	chr17	27456279	27456309	(55801132)	+	(GGGAG)n	Simple_repeat	1	32	(0)	1586829
222	20.4	1.1	11.6	chr17	27504891	27504975	(55752466)	+	MIR1_Amn	SINE/MIR	101	178	(90)	1586926
1067	5.5	0.0	0.0	chr17	28719633	28719760	(54537681)	+	AluYh3	SINE/Alu	142	269	(42)	1589196
30	0.0	3.1	0.0	chr17	28719764	28719795	(54537646)	+	(AAAACAA)n	Simple_repeat	1	33	(0)	1589197
13	25.4	3.0	4.4	chr17	28902918	28902983	(54354458)	+	(CCCCGCG)n	Simple_repeat	1	68	(0)	1589592
15	25.7	1.9	1.9	chr17	29613497	29613549	(53643892)	+	GA-rich	Low_complexity	1	54	(0)	1591012
13	5.7	10.0	4.5	chr17	29613602	29613641	(53643800)	+	(CGCCAG)n	Simple_repeat	1	44	(0)	1591013
224	24.5	2.9	1.3	chr17	31425916	31425999	(51831442)	+	MIR3	SINE/MIR	72	153	(55)	1594543
27	22.7	1.0	5.2	chr17	31487914	31487941	(51769500)	+	(GGCCCC)n	Simple_repeat	1	68	(29)	1594689
646	0.0	0.0	0.0	chr17	31550074	31550145	(51707296)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1594799
1803	15.3	6.5	0.0	chr17	32625557	32625830	(50631611)	C	AluJb	SINE/Alu	(19)	293	1	1597151
265	29.8	8.8	0.9	chr17	32625954	32626068	(50631373)	+	MIR3	SINE/MIR	60	184	(84)	1597152
217	34.4	4.8	6.7	chr17	32626063	32626237	(50631204)	+	L2c	LINE/L2	3187	3385	(2)	1597153
17	26.4	1.9	0.0	chr17	35089065	35089118	(48168323)	+	(CGC)n	Simple_repeat	1	55	(0)	1601648
25	28.1	0.0	6.6	chr17	35089283	35089292	(48168149)	+	(CCCCG)n	Simple_repeat	1	25	(96)	1601649
12	24.0	3.9	6.2	chr17	35089293	35089369	(48168072)	+	(CCCAGC)n	Simple_repeat	1	80	(0)	1601650
19	25.7	4.0	3.9	chr17	35764050	35764148	(47493293)	+	(GGACGA)n	Simple_repeat	1	103	(0)	1602754
13	24.0	2.2	2.1	chr17	35795625	35795670	(47461771)	+	G-rich	Low_complexity	1	47	(0)	1602817
5778	14.0	2.5	2.6	chr17	36468994	36469968	(46787473)	C	LTR1D	LTR/ERV1	(1)	974	1	1604009
376	32.1	12.7	0.0	chr17	36505010	36505140	(46752301)	C	MER91A	DNA/hAT-Tip100	(46)	150	1	1604059
452	26.2	12.1	1.2	chr17	38718519	38718680	(44538761)	C	MIRc	SINE/MIR	(85)	183	2	1608433
641	2.7	0.0	0.0	chr17	39154490	39154562	(44102879)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609433
16	22.7	5.7	2.7	chr17	39197704	39197773	(44059668)	+	(CCCG)n	Simple_repeat	1	74	(0)	1609528
195	38.3	9.4	1.5	chr17	41417336	41417738	(41839703)	C	L2a	LINE/L2	(625)	2794	2357	1613589
12	7.5	6.7	3.1	chr17	41786139	41786168	(41471273)	+	G-rich	Low_complexity	1	32	(0)	1614291
310	30.2	17.2	2.8	chr17	41864167	41864702	(41392739)	+	L2b	LINE/L2	2728	3358	(17)	1614461
15	17.9	3.0	7.3	chr17	41864751	41864816	(41392625)	+	(GCCCTCC)n	Simple_repeat	1	68	(0)	1614462
13	0.0	0.0	8.0	chr17	42050479	42050503	(41206938)	+	(CCGC)n	Simple_repeat	1	25	(0)	1614843
13	17.2	7.8	4.3	chr17	42050740	42050803	(41206638)	+	(CGCCCCA)n	Simple_repeat	1	69	(0)	1614844
26	17.6	3.0	1.5	chr17	42098474	42098539	(41158902)	+	G-rich	Low_complexity	1	68	(0)	1614946
430	28.7	0.8	1.6	chr17	42536759	42536882	(40720559)	+	MIRb	SINE/MIR	67	189	(79)	1615846
20	28.0	0.0	1.5	chr17	42548091	42548157	(40709284)	+	G-rich	Low_complexity	1	67	(0)	1615867
2043	11.2	0.7	4.3	chr17	42658676	42658979	(40598462)	+	AluJr	SINE/Alu	1	293	(19)	1616102
3470	13.6	8.8	2.4	chr17	42658980	42659019	(40598422)	+	L1MB3	LINE/L1	6151	6182	(1)	1616101
13	20.2	0.0	2.7	chr17	42659145	42659181	(40598260)	+	(CTCCC)n	Simple_repeat	1	37	(0)	1616103
2181	8.3	0.0	0.0	chr17	43937655	43937979	(39319462)	C	AluSx1	SINE/Alu	(0)	312	6	1618887
20	13.0	2.3	2.2	chr17	44765193	44765238	(38492203)	+	G-rich	Low_complexity	1	46	(0)	1620675
254	31.3	5.7	2.9	chr17	44765567	44765603	(38491838)	C	MIR	SINE/MIR	(71)	191	151	1620676
2141	11.2	2.6	2.2	chr17	44765604	44765914	(38491527)	C	AluSx	SINE/Alu	(0)	312	1	1620677
280	30.6	4.8	2.0	chr17	44899223	44899322	(38358119)	+	MIR3	SINE/MIR	101	203	(5)	1620954
1099	14.8	5.1	0.0	chr17	45232026	45232194	(38025247)	+	AluJo	SINE/Alu	135	312	(0)	1621649
12	12.5	0.0	3.6	chr17	45247760	45247787	(38009654)	+	(CCCCT)n	Simple_repeat	1	28	(0)	1621665
12	5.5	0.0	0.0	chr17	45248052	45248070	(38009371)	+	(GGA)n	Simple_repeat	1	19	(0)	1621666
15	17.0	0.0	0.0	chr17	45405724	45405756	(37851685)	+	(CTCGTC)n	Simple_repeat	1	33	(0)	1621981
50	0.0	0.0	0.0	chr17	45895049	45895091	(37362350)	+	(GT)n	Simple_repeat	1	43	(0)	1622997
21	19.0	1.1	9.5	chr17	46225114	46225207	(37032234)	+	(CCCCGCG)n	Simple_repeat	1	95	(0)	1623616
23	13.3	0.0	0.0	chr17	46225507	46225547	(37031894)	+	(GTCTCT)n	Simple_repeat	1	41	(0)	1623617
24	18.7	3.9	3.7	chr17	47851041	47851118	(35406323)	+	(GGCGGCA)n	Simple_repeat	1	81	(0)	1626827
580	30.0	12.3	1.4	chr17	47990789	47991011	(35266430)	+	L3	LINE/CR1	3815	4065	(34)	1627071
14	23.0	1.6	6.2	chr17	48107845	48107907	(35149534)	+	G-rich	Low_complexity	1	64	(0)	1627313
658	2.7	0.0	0.0	chr17	49192528	49192600	(34064841)	+	tRNA-Gln-CAA	tRNA	1	73	(2)	1629400
16	16.4	4.9	0.0	chr17	49362245	49362285	(33895156)	+	(GCGC)n	Simple_repeat	1	43	(0)	1629785
12	28.7	0.0	2.1	chr17	49362266	49362313	(33895128)	+	(CGCCCC)n	Simple_repeat	1	48	(0)	1629786
19	4.0	3.9	0.0	chr17	49515375	49515400	(33742041)	+	(AC)n	Simple_repeat	1	27	(0)	1630080
15	0.0	0.0	0.0	chr17	49515400	49515416	(33742025)	+	(AG)n	Simple_repeat	1	17	(0)	1630081
12	21.5	4.4	2.1	chr17	49515437	49515481	(33741960)	+	(GCAG)n	Simple_repeat	1	47	(0)	1630082
14	27.1	0.0	0.0	chr17	49515586	49515629	(33741812)	+	(CCTGAG)n	Simple_repeat	1	44	(0)	1630083
17	4.3	0.0	0.0	chr17	50055727	50055750	(33201691)	+	(CAG)n	Simple_repeat	1	24	(0)	1631085
189	29.7	8.4	15.6	chr17	50547442	50547788	(32709653)	+	L2c	LINE/L2	3056	3387	(0)	1632014
15	20.7	2.6	0.0	chr17	50835784	50835822	(32421619)	+	(GCA)n	Simple_repeat	1	40	(0)	1632564
17	4.3	0.0	0.0	chr17	50835991	50836014	(32421427)	+	(GCT)n	Simple_repeat	1	24	(0)	1632565
20	15.2	2.2	2.1	chr17	52158770	52158815	(31098626)	+	GA-rich	Low_complexity	1	47	(0)	1634982
17	22.2	2.9	5.6	chr17	52158881	52158950	(31098491)	+	GA-rich	Low_complexity	1	72	(0)	1634983
15	25.1	1.7	3.3	chr17	52158971	52159030	(31098411)	+	(CCGCCT)n	Simple_repeat	1	61	(0)	1634984
192	25.8	18.8	7.6	chr17	54900278	54900474	(28356967)	C	MIRb	SINE/MIR	(9)	259	36	1638728
16	16.7	4.3	6.9	chr17	54900664	54900732	(28356709)	+	(CCCGCG)n	Simple_repeat	1	72	(0)	1638729
773	17.7	0.7	0.7	chr17	55264555	55264696	(27992745)	C	MER5B	DNA/hAT-Charlie	(7)	171	30	1639346
16	0.0	0.0	0.0	chr17	55264749	55264765	(27992676)	+	(A)n	Simple_repeat	1	17	(0)	1639347
17	20.3	4.3	2.0	chr17	57518927	57518973	(25738468)	+	(CT)n	Simple_repeat	1	49	(0)	1643409
197	35.6	2.8	7.1	chr17	57993997	57994108	(25263333)	C	L2c	LINE/L2	(15)	3372	3266	1644239
13	19.1	0.0	0.0	chr17	59106906	59106935	(24150506)	+	G-rich	Low_complexity	1	30	(0)	1646445
292	31.7	1.1	4.7	chr17	59107090	59107281	(24150160)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	1646446
956	10.5	0.0	3.0	chr17	59892262	59892394	(23365047)	+	FLAM_C	SINE/Alu	3	131	(12)	1648195
573	19.6	1.4	1.6	chr17	59892530	59892669	(23364772)	C	MIRb	SINE/MIR	(90)	178	38	1648196
829	19.1	0.0	0.7	chr17	62617851	62617991	(20639450)	C	FLAM_C	SINE/Alu	(3)	140	1	1653372
413	32.4	10.1	7.4	chr17	62802520	62802817	(20454624)	C	L2b	LINE/L2	(107)	3268	2961	1653710
486	18.9	0.0	2.2	chr17	62802945	62803034	(20454407)	C	AluJo	SINE/Alu	(2)	310	223	1653712
23	18.6	1.7	1.7	chr17	63477101	63477184	(19780257)	+	(GCTGCC)n	Simple_repeat	1	84	(0)	1654788
11	13.3	5.7	2.7	chr17	63477350	63477384	(19780057)	+	(GCCCGG)n	Simple_repeat	1	37	(0)	1654789
14	13.7	3.1	0.0	chr17	63477434	63477465	(19779976)	+	(CCCGAA)n	Simple_repeat	1	33	(0)	1654790
11	14.8	4.9	4.7	chr17	63741930	63741970	(19515471)	+	(GGCCGC)n	Simple_repeat	1	43	(0)	1655272
29	2.8	2.8	0.0	chr17	63839571	63839606	(19417835)	+	(AAAAC)n	Simple_repeat	1	37	(0)	1655435
26	17.3	4.2	6.1	chr17	64263250	64263344	(18994097)	+	(GCC)n	Simple_repeat	1	99	(0)	1656174
1150	12.7	0.0	1.2	chr17	64918754	64918918	(18338523)	+	AluSx1	SINE/Alu	2	164	(148)	1657590
12	21.5	4.4	2.1	chr17	64918991	64919035	(18338406)	+	(CGG)n	Simple_repeat	1	47	(0)	1657591
30	16.4	0.0	3.1	chr17	65137148	65137212	(18120229)	+	(TCC)n	Simple_repeat	1	65	(0)	1658062
14	17.3	0.0	6.7	chr17	65137401	65137445	(18119996)	+	(CCCGC)n	Simple_repeat	1	45	(0)	1658063
504	25.4	7.1	2.0	chr17	66725845	66726045	(16531396)	C	LTR16C	LTR/ERVL	(9)	480	269	1660710
487	11.8	0.0	0.0	chr17	68019900	68019967	(15237474)	C	tRNA-Arg-AGG	tRNA	(6)	70	3	1663342
443	28.6	5.2	1.2	chr17	68020281	68020446	(15236995)	C	MER5B	DNA/hAT-Charlie	(5)	173	1	1663343
19	26.2	5.7	2.7	chr17	68101797	68101853	(15155588)	+	(GCCGCC)n	Simple_repeat	1	108	(0)	1663535
24	20.3	0.9	9.2	chr17	68205304	68205411	(15052030)	+	(CGCGCCC)n	Simple_repeat	1	109	(0)	1663741
29	5.8	0.0	0.0	chr17	68205729	68205764	(15051677)	+	(GCCCCG)n	Simple_repeat	1	36	(0)	1663742
20	7.0	0.0	0.0	chr17	68205965	68205994	(15051447)	+	(GGC)n	Simple_repeat	1	30	(0)	1663743
2494	8.1	0.3	0.0	chr17	72727372	72727679	(10529762)	+	AluY	SINE/Alu	1	309	(2)	1670907
350	28.0	1.5	0.8	chr17	73183123	73183255	(10074186)	C	LTR33	LTR/ERVL	(9)	506	373	1671804
238	27.6	0.0	1.3	chr17	73183259	73183335	(10074106)	+	L4_C_Mam	LINE/RTE-X	2459	2534	(2604)	1671805
1872	14.8	0.7	0.7	chr17	73189830	73190112	(10067329)	+	AluJb	SINE/Alu	1	283	(29)	1671824
873	29.7	6.6	3.4	chr17	73278256	73278526	(9978915)	+	L4_A_Mam	LINE/RTE-X	4701	4981	(9)	1671984
485	34.0	11.8	4.5	chr17	74155727	74155981	(9101460)	C	L2a	LINE/L2	(661)	2758	2490	1673580
1879	23.7	9.2	1.2	chr17	74155998	74156484	(9100957)	+	LTR33A_	LTR/ERVL	2	531	(0)	1673583
2577	6.8	0.0	0.0	chr17	74284403	74284711	(8972730)	C	AluSc8	SINE/Alu	(2)	309	1	1673851
464	30.6	5.2	5.3	chr17	74332789	74332994	(8924447)	+	MIRc	SINE/MIR	15	221	(47)	1673957
466	20.2	3.5	0.2	chr17	74333243	74333359	(8924082)	C	L1MB8	LINE/L1	(225)	6017	5896	1673958
2055	11.7	1.4	0.0	chr17	74333362	74333644	(8923797)	C	AluSz	SINE/Alu	(9)	303	17	1673959
30	0.0	0.0	0.0	chr17	76671394	76671419	(6586022)	+	(GT)n	Simple_repeat	1	26	(0)	1678522
31	24.3	5.9	0.0	chr17	76697885	76697988	(6559453)	+	GA-rich	Low_complexity	1	110	(0)	1678562
14	12.7	0.0	0.0	chr17	78378668	78378693	(4878748)	+	(GGC)n	Simple_repeat	1	26	(0)	1681762
183	29.9	8.3	0.0	chr17	78903042	78903118	(4354323)	+	MamRTE1	LINE/RTE-BovB	1838	1921	(1891)	1682654
358	25.6	6.5	0.8	chr17	79401836	79401965	(3855476)	+	MLT1C	LTR/ERVL-MaLR	329	466	(1)	1683379
14	13.6	0.0	5.6	chr17	79707220	79707255	(3550186)	+	(CCCCT)n	Simple_repeat	1	36	(0)	1683787
18	18.8	2.0	2.0	chr17	79810553	79810602	(3446839)	+	(CCGCTC)n	Simple_repeat	1	51	(0)	1683966
44	7.6	0.0	0.0	chr17	79810659	79810714	(3446727)	+	(TG)n	Simple_repeat	1	56	(0)	1683967
18	19.5	0.0	0.0	chr17	79810795	79810829	(3446612)	+	(C)n	Simple_repeat	1	35	(0)	1683968
16	14.9	0.0	0.0	chr17	80147172	80147202	(3110239)	+	(ACGT)n	Simple_repeat	1	31	(0)	1684529
11	13.2	5.7	2.7	chr17	80456126	80456160	(2801281)	+	G-rich	Low_complexity	1	37	(0)	1685039
2252	9.3	0.3	0.3	chr17	80485620	80485910	(2771531)	+	AluSg	SINE/Alu	2	292	(18)	1685084
187	26.7	2.2	0.0	chr17	80485937	80485981	(2771460)	+	MIRb	SINE/MIR	61	106	(162)	1685085
12	16.1	0.0	3.3	chr17	80486343	80486372	(2771069)	+	GA-rich	Low_complexity	1	30	(0)	1685086
12	11.1	0.0	8.6	chr17	81067750	81067784	(2189657)	+	(CCTCAG)n	Simple_repeat	1	35	(0)	1685837
517	30.1	10.2	3.6	chr17	81076583	81076711	(2180730)	+	L1MB7	LINE/L1	5696	5824	(360)	1685842
1611	14.3	5.6	1.5	chr17	81076712	81076984	(2180457)	+	AluJo	SINE/Alu	12	296	(16)	1685843
19	29.5	0.0	5.9	chr17	81119192	81119292	(2138149)	+	G-rich	Low_complexity	1	101	(0)	1685870
1877	15.7	0.7	0.0	chr17	81167012	81167297	(2090144)	+	AluJo	SINE/Alu	2	289	(23)	1685936
467	30.4	6.9	0.8	chr17	81350243	81350501	(1906940)	+	MLT1J1	LTR/ERVL-MaLR	19	294	(150)	1686147
412	28.6	11.4	0.5	chr17	81489879	81490089	(1767352)	+	L1M5	LINE/L1	5294	5530	(594)	1686300
13	23.5	2.5	0.0	chr17	81514653	81514692	(1742749)	+	G-rich	Low_complexity	1	41	(0)	1686353
994	22.4	5.2	4.5	chr17	82399441	82399748	(857693)	C	L1MB3	LINE/L1	(2)	6181	5872	1687574
2300	5.5	1.9	1.6	chr17	82734722	82735030	(522411)	+	AluY	SINE/Alu	1	310	(1)	1688166
21	11.7	0.0	2.6	chr18	812001	812039	(79561246)	+	(GCG)n	Simple_repeat	1	39	(0)	1690507
15	19.5	6.5	3.0	chr18	812040	812055	(79561230)	+	G-rich	Low_complexity	18	66	(0)	1690508
17	22.5	0.0	0.0	chr18	812316	812351	(79560934)	+	(C)n	Simple_repeat	1	36	(0)	1690509
2736	29.8	2.7	2.8	chr18	3296459	3297771	(77075514)	+	L1PB3	LINE/L1	3	1313	(5550)	1694111
1537	21.5	14.4	1.5	chr18	10953625	10954087	(69419198)	C	LTR53B	LTR/ERVL	(0)	533	1	1705200
3293	24.7	7.0	2.0	chr18	10954088	10954515	(69418770)	C	L1ME1	LINE/L1	(1404)	4742	4287	1705199
1198	23.7	4.0	0.6	chr18	12233057	12233391	(68139894)	C	L1MC2	LINE/L1	(471)	5873	5527	1707052
20	3.0	2.6	5.1	chr18	12884216	12884253	(67489032)	+	(GCGCTGC)n	Simple_repeat	1	39	(0)	1708294
15	19.1	5.9	3.7	chr18	12884254	12884266	(67489019)	+	(GC)n	Simple_repeat	1	54	(0)	1708295
22	29.8	0.0	4.1	chr18	12884325	12884335	(67488950)	+	(GGCGCGG)n	Simple_repeat	1	54	(43)	1708296
24	25.3	0.0	3.8	chr18	12884336	12884415	(67488870)	+	G-rich	Low_complexity	1	80	(0)	1708297
22	29.8	0.0	4.1	chr18	12884416	12884421	(67488864)	+	(GGCGCGG)n	Simple_repeat	55	97	(0)	1708296
799	21.5	7.0	2.0	chr18	21761502	21761705	(58611580)	+	MLT1G1	LTR/ERVL-MaLR	3	217	(362)	1713264
15	3.6	0.0	11.1	chr18	21761714	21761749	(58611536)	+	(TGTC)n	Simple_repeat	1	36	(0)	1713265
20	10.1	0.0	0.0	chr18	23437922	23437953	(56935332)	+	(GCA)n	Simple_repeat	1	32	(0)	1716196
13	4.7	4.5	0.0	chr18	24271698	24271719	(56101566)	+	(CCT)n	Simple_repeat	1	23	(0)	1717613
26	6.3	0.0	0.0	chr18	24272237	24272270	(56101015)	+	(T)n	Simple_repeat	1	34	(0)	1717614
15	9.7	6.1	0.0	chr18	28175585	28175617	(52197668)	+	(CCAGCC)n	Simple_repeat	1	35	(0)	1723414
16	25.7	1.8	1.7	chr18	31102451	31102507	(49270778)	+	(CGGCCC)n	Simple_repeat	1	58	(0)	1727208
18	24.3	6.3	1.2	chr18	31685553	31685631	(48687654)	+	(CCG)n	Simple_repeat	1	84	(0)	1728041
1005	18.3	3.0	1.0	chr18	31714083	31714281	(48659004)	C	MER3	DNA/hAT-Charlie	(6)	203	1	1728098
13	21.5	4.7	0.0	chr18	34224930	34224972	(46148313)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	1731668
23	15.2	3.1	4.5	chr18	34224973	34224987	(46148298)	+	(CCCCT)n	Simple_repeat	30	69	(0)	1731667
13	17.6	2.5	2.4	chr18	34225082	34225121	(46148164)	+	(GCAGGCT)n	Simple_repeat	1	41	(0)	1731669
14	24.6	0.0	3.9	chr18	34225331	34225382	(46147903)	+	(TCCCCCT)n	Simple_repeat	1	52	(0)	1731670
25	8.6	0.0	2.6	chr18	34493213	34493251	(45880034)	+	(TG)n	Simple_repeat	1	39	(0)	1732026
13	15.8	2.7	2.6	chr18	34493261	34493297	(45879988)	+	GA-rich	Low_complexity	1	38	(0)	1732027
13	8.6	0.0	6.9	chr18	35972700	35972728	(44400557)	+	(GCG)n	Simple_repeat	1	29	(0)	1734074
12	18.1	2.4	4.8	chr18	36828617	36828657	(43544628)	+	(CCT)n	Simple_repeat	1	42	(0)	1735268
1685	18.4	2.2	0.0	chr18	39350729	39351000	(41022285)	C	AluJb	SINE/Alu	(34)	278	1	1738571
4461	14.4	0.7	5.0	chr18	39351001	39351604	(41021681)	+	MER72	LTR/ERV1	130	722	(0)	1738569
57	33.0	2.6	0.8	chr18	44742937	44743168	(35630117)	+	(CTCT)n	Simple_repeat	1	238	(0)	1745895
13	19.9	2.9	0.0	chr18	44743319	44743353	(35629932)	+	(AAC)n	Simple_repeat	1	36	(0)	1745896
194	35.1	2.6	5.1	chr18	45448738	45448893	(34924392)	+	L2a	LINE/L2	3271	3422	(4)	1746930
877	15.5	9.2	0.0	chr18	47983607	47983774	(32389511)	C	MER5A	DNA/hAT-Charlie	(2)	187	3	1751111
17	25.6	0.0	3.4	chr18	48008319	48008377	(32364908)	+	G-rich	Low_complexity	1	59	(0)	1751162
13	27.6	4.1	2.6	chr18	48008366	48008375	(32364910)	+	(CGGCCC)n	Simple_repeat	1	22	(54)	1751163
13	17.6	2.4	4.7	chr18	48008376	48008417	(32364868)	+	(CCT)n	Simple_repeat	1	43	(0)	1751164
13	27.6	4.1	2.6	chr18	48008418	48008438	(32364847)	+	(CGGCCC)n	Simple_repeat	23	76	(0)	1751163
220	21.9	0.0	0.0	chr18	48008702	48008742	(32364543)	+	L2c	LINE/L2	3344	3384	(3)	1751165
1395	20.6	8.9	0.3	chr18	48008789	48009139	(32364146)	C	L1MC1	LINE/L1	(6)	6327	5944	1751166
2057	11.9	0.0	3.1	chr18	48095421	48095713	(32277572)	+	AluSx	SINE/Alu	1	284	(28)	1751321
31	0.0	3.0	0.0	chr18	48095714	48095746	(32277539)	+	(AAAAT)n	Simple_repeat	1	34	(0)	1751322
15	12.5	2.6	5.0	chr18	55321479	55321517	(25051768)	+	GA-rich	Low_complexity	1	40	(0)	1762522
16	8.1	0.0	0.0	chr18	57117121	57117146	(23256139)	+	(TTTG)n	Simple_repeat	1	26	(0)	1765073
354	28.3	8.4	4.8	chr18	57523463	57523692	(22849593)	+	MamGypLTR2c	LTR/Gypsy	2	240	(828)	1765673
373	29.2	2.6	2.6	chr18	57523817	57523932	(22849353)	C	L2a	LINE/L2	(43)	3383	3268	1765674
753	16.3	2.3	0.0	chr18	58461310	58461438	(21911847)	+	MER5A	DNA/hAT-Charlie	58	189	(0)	1767281
889	19.4	1.7	0.6	chr18	58461535	58461710	(21911575)	+	MER5B	DNA/hAT-Charlie	1	178	(0)	1767282
13	23.4	1.5	7.6	chr18	62610974	62611038	(17762247)	+	GA-rich	Low_complexity	1	66	(0)	1773714
19	0.0	0.0	0.0	chr18	67515901	67515921	(12857364)	+	(T)n	Simple_repeat	1	21	(0)	1780559
12	24.1	0.0	0.0	chr18	70416082	70416115	(9957170)	+	(GGT)n	Simple_repeat	1	34	(0)	1784580
1708	16.5	2.9	4.1	chr18	70416298	70416613	(9956672)	+	AluJr	SINE/Alu	1	312	(0)	1784581
349	29.4	6.6	0.9	chr18	72674777	72674989	(7698296)	+	ERV3-16A3_LTR	LTR/ERVL	1	226	(196)	1787542
1436	24.3	20.9	1.6	chr18	74280905	74281741	(6091544)	C	L2a	LINE/L2	(562)	2857	1817	1789673
12	13.2	5.7	2.7	chr18	74496247	74496281	(5877004)	+	(GTGGC)n	Simple_repeat	1	37	(0)	1789971
15	9.4	5.6	2.6	chr18	79911302	79911337	(461948)	+	(CAGG)n	Simple_repeat	1	38	(0)	1795889
12	15.3	3.5	0.0	chr19	461976	462004	(58155612)	+	G-rich	Low_complexity	1	30	(0)	1796955
12	15.7	2.6	5.0	chr19	462094	462132	(58155484)	+	(CGCGGT)n	Simple_repeat	1	40	(0)	1796956
2666	4.9	0.0	0.0	chr19	770014	770321	(57847295)	+	AluY	SINE/Alu	1	308	(3)	1797563
2219	10.1	0.0	1.4	chr19	770560	770855	(57846761)	+	AluSz	SINE/Alu	1	292	(20)	1797564
1480	3.9	0.6	0.6	chr19	921593	921770	(57695846)	C	AluY	SINE/Alu	(119)	192	15	1797895
2173	12.9	0.0	0.0	chr19	922264	922557	(57695059)	C	AluSq	SINE/Alu	(10)	303	10	1797896
1726	15.5	3.7	1.4	chr19	980894	981183	(57636433)	+	AluJr	SINE/Alu	1	297	(15)	1798023
482	30.2	4.1	6.5	chr19	996695	996849	(57620767)	+	L1MB3	LINE/L1	5429	5586	(594)	1798042
29	0.0	0.0	0.0	chr19	996857	996883	(57620733)	+	(TTTGTT)n	Simple_repeat	1	27	(0)	1798043
2277	8.2	0.0	0.7	chr19	996884	997167	(57620449)	C	AluSx1	SINE/Alu	(28)	284	1	1798044
197	27.8	9.4	5.7	chr19	1040743	1040864	(57576752)	+	MIR1_Amn	SINE/MIR	47	173	(57)	1798128
12	11.6	3.3	3.2	chr19	1451945	1451974	(57165642)	+	GA-rich	Low_complexity	1	31	(0)	1798804
214	26.2	2.1	2.2	chr19	1813101	1813179	(56804437)	C	L2c	LINE/L2	(1)	3386	3299	1799566
14	8.3	0.0	3.6	chr19	1905230	1905257	(56712359)	+	(CGGGG)n	Simple_repeat	1	28	(0)	1799731
23	24.6	2.7	2.6	chr19	1905578	1905652	(56711964)	+	(CG)n	Simple_repeat	1	77	(0)	1799732
244	18.6	11.4	0.0	chr19	2152028	2152097	(56465519)	C	MIRc	SINE/MIR	(76)	192	114	1800224
330	32.4	4.2	0.0	chr19	3075918	3076053	(55541563)	C	MER3	DNA/hAT-Charlie	(65)	144	3	1802338
252	24.4	10.9	1.2	chr19	3076260	3076342	(55541274)	C	L2b	LINE/L2	(13)	3362	3271	1802339
669	23.6	4.5	0.5	chr19	3076344	3076535	(55541081)	C	MER20	DNA/hAT-Charlie	(19)	200	1	1802340
16	4.0	0.0	6.7	chr19	3539285	3539314	(55078302)	+	(CCCT)n	Simple_repeat	1	30	(0)	1803486
2227	10.5	0.0	0.7	chr19	4622434	4622728	(53994888)	C	AluSx	SINE/Alu	(19)	293	1	1806035
184	25.6	0.0	0.0	chr19	4648144	4648182	(53969434)	+	L2b	LINE/L2	3337	3375	(0)	1806115
646	1.4	0.0	0.0	chr19	4724070	4724141	(53893475)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1806264
1937	7.9	0.3	12.5	chr19	4724169	4724496	(53893120)	C	AluSx	SINE/Alu	(14)	298	11	1806265
12	21.6	0.0	4.9	chr19	4923261	4923301	(53694315)	+	(CCT)n	Simple_repeat	1	41	(0)	1806888
832	22.9	5.1	1.0	chr19	5037627	5037833	(53579783)	C	MER20	DNA/hAT-Charlie	(1)	218	3	1807123
18	15.0	0.0	2.6	chr19	5037834	5037872	(53579744)	+	(CTG)n	Simple_repeat	1	39	(0)	1807124
12	20.8	1.7	8.3	chr19	5137860	5137918	(53479698)	+	(CCCAG)n	Simple_repeat	1	60	(0)	1807235
288	31.2	9.4	0.0	chr19	5689973	5690068	(52927548)	C	MIR	SINE/MIR	(108)	154	49	1808598
358	35.4	11.5	1.4	chr19	6460691	6460910	(52156706)	C	MIR	SINE/MIR	(1)	261	23	1810296
18	24.2	0.0	0.0	chr19	7595613	7595661	(51021955)	+	(CA)n	Simple_repeat	1	49	(0)	1813324
20	30.4	3.4	0.0	chr19	7595749	7595836	(51021780)	+	G-rich	Low_complexity	1	91	(0)	1813325
28	3.3	0.0	0.0	chr19	7595878	7595908	(51021708)	+	(GCG)n	Simple_repeat	1	31	(0)	1813326
3361	14.2	2.6	1.5	chr19	7721978	7722449	(50895167)	C	MER1A	DNA/hAT-Charlie	(44)	485	1	1813580
252	22.1	2.9	0.0	chr19	7722450	7722476	(50895140)	C	LOR1b	LTR/ERV1	(433)	28	2	1813577
180	35.2	3.3	0.0	chr19	7853528	7853615	(50764001)	C	L2a	LINE/L2	(66)	3360	3270	1813860
181	24.4	4.2	3.2	chr19	7853673	7853765	(50763851)	C	L2a	LINE/L2	(339)	3080	2987	1813860
1740	17.6	0.0	4.2	chr19	7882826	7883132	(50734484)	C	AluJo	SINE/Alu	(18)	294	1	1813902
286	27.3	0.0	12.9	chr19	7883410	7883510	(50734106)	+	LTR16C	LTR/ERVL	155	242	(247)	1813903
1092	7.8	3.4	0.0	chr19	7883513	7883653	(50733963)	+	AluSx	SINE/Alu	157	302	(10)	1813904
18	19.5	2.0	2.0	chr19	7903905	7903953	(50713663)	+	(GGC)n	Simple_repeat	1	50	(0)	1813951
422	19.7	0.0	0.0	chr19	9621595	9621665	(48995951)	+	FLAM_C	SINE/Alu	1	71	(62)	1817789
3155	15.1	1.8	2.5	chr19	9621666	9622251	(48995365)	C	LTR10C	LTR/ERV1	(62)	529	1	1817790
14	8.3	3.9	0.0	chr19	9936321	9936346	(48681270)	+	(AGC)n	Simple_repeat	1	27	(0)	1818498
428	31.2	6.3	3.9	chr19	10543353	10543429	(48074187)	C	L1MA10	LINE/L1	(162)	6017	5944	1820051
286	10.5	5.0	1.7	chr19	10543403	10543460	(48074156)	C	L1MD1	LINE/L1	(350)	5892	5833	1820053
334	13.8	5.3	3.6	chr19	10543461	10543552	(48074064)	C	MIR	SINE/MIR	(54)	154	61	1820054
16	16.5	0.0	0.0	chr19	10543665	10543698	(48073918)	+	G-rich	Low_complexity	1	34	(0)	1820055
229	29.6	6.7	0.0	chr19	10881494	10881618	(47735998)	C	L2	LINE/L2	(1321)	2098	1965	1820916
258	37.1	0.0	2.2	chr19	10881810	10881900	(47735716)	C	L2a	LINE/L2	(10)	3416	3328	1820917
14	16.7	2.9	0.0	chr19	11197889	11197922	(47419694)	+	G-rich	Low_complexity	1	35	(0)	1821708
264	28.8	4.8	0.0	chr19	11374303	11374382	(47243234)	C	MIRb	SINE/MIR	(84)	184	101	1822167
14	14.1	0.0	3.0	chr19	11505740	11505772	(47111844)	+	(GCCTCA)n	Simple_repeat	1	33	(0)	1822502
1003	23.8	10.4	4.3	chr19	12965023	12965417	(45652199)	C	L2	LINE/L2	(537)	2882	2461	1825650
20	19.3	2.4	0.0	chr19	13211693	13211734	(45405882)	+	(TG)n	Simple_repeat	1	43	(0)	1826151
535	28.4	3.5	4.0	chr19	14089470	14089704	(44527912)	C	MIR	SINE/MIR	(0)	262	35	1828545
37	20.9	2.9	1.9	chr19	14090034	14090136	(44527480)	+	(CGG)n	Simple_repeat	1	106	(0)	1828546
529	25.6	11.1	0.0	chr19	14217235	14217410	(44400206)	+	L2a	LINE/L2	3228	3425	(1)	1828851
2281	4.2	0.0	0.4	chr19	14573860	14574123	(44043493)	C	AluY	SINE/Alu	(11)	300	38	1829831
2373	10.4	0.0	1.9	chr19	14574124	14574260	(44043356)	C	AluSq	SINE/Alu	(180)	133	2	1829830
437	24.1	4.4	0.0	chr19	14574332	14574439	(44043177)	C	MER91C	DNA/hAT-Tip100	(27)	113	1	1829832
363	26.1	7.3	3.2	chr19	14574496	14574653	(44042963)	+	MIR3	SINE/MIR	18	182	(26)	1829833
28	23.7	4.8	5.2	chr19	14690058	14690206	(43927410)	+	(GCGCG)n	Simple_repeat	1	148	(0)	1830169
12	24.3	0.0	4.3	chr19	16197976	16198022	(42419594)	+	(CGCTGC)n	Simple_repeat	1	47	(0)	1833391
231	36.2	6.1	2.5	chr19	17333841	17334044	(41283572)	+	L2c	LINE/L2	2916	3127	(260)	1836047
659	26.1	10.0	1.0	chr19	17334054	17334254	(41283362)	C	MIR	SINE/MIR	(6)	256	36	1836048
11	27.2	3.0	4.3	chr19	18203943	18204009	(40413607)	+	(TGGCGG)n	Simple_repeat	1	69	(0)	1838358
15	11.2	3.5	0.0	chr19	18203982	18204010	(40413606)	+	(GGC)n	Simple_repeat	1	30	(0)	1838359
12	26.8	0.0	0.0	chr19	18255254	18255293	(40362323)	+	(CAGCAG)n	Simple_repeat	1	40	(0)	1838480
199	25.8	0.0	0.0	chr19	18292062	18292123	(40325493)	C	L2b	LINE/L2	(298)	3077	3016	1838554
16	24.4	1.6	4.7	chr19	18323042	18323104	(40294512)	+	(CGC)n	Simple_repeat	1	64	(0)	1838616
16	14.8	0.0	4.9	chr19	18636946	18636986	(39980630)	+	(CCCCG)n	Simple_repeat	1	41	(0)	1839290
13	33.5	1.6	1.6	chr19	18637038	18637100	(39980516)	+	(GCG)n	Simple_repeat	1	64	(0)	1839291
30	20.6	1.0	5.9	chr19	18683858	18683957	(39933659)	+	G-rich	Low_complexity	1	101	(0)	1839369
244	26.8	0.0	0.0	chr19	19232548	19232603	(39385013)	C	L2b	LINE/L2	(1)	3374	3319	1840565
349	25.8	0.0	0.0	chr19	19232693	19232781	(39384835)	+	MER3	DNA/hAT-Charlie	95	183	(26)	1840566
180	39.3	3.3	0.0	chr19	19279015	19279131	(39338485)	C	MIR	SINE/MIR	(117)	145	25	1840667
461	24.6	11.4	3.4	chr19	19485518	19485694	(39131922)	C	MLT1H1	LTR/ERVL-MaLR	(289)	266	74	1841072
13	24.5	2.3	0.0	chr19	19628246	19628288	(38989328)	+	(CGCCC)n	Simple_repeat	1	44	(0)	1841331
1919	15.8	11.2	6.8	chr19	19668165	19668579	(38949037)	C	LTR21B	LTR/ERV1	(0)	437	2	1841393
1075	20.0	5.5	4.6	chr19	19733293	19733587	(38884029)	C	L1MB2	LINE/L1	(36)	6135	5829	1841529
180	31.3	6.4	3.0	chr19	29119932	29120066	(29497550)	C	L2c	LINE/L2	(217)	3170	3031	1849778
207	29.1	19.0	1.4	chr19	29120166	29120308	(29497308)	C	MIRb	SINE/MIR	(79)	189	16	1849779
15	31.2	0.0	1.7	chr19	30909305	30909362	(27708254)	+	GA-rich	Low_complexity	1	58	(0)	1852444
1846	13.4	4.0	0.3	chr19	32406357	32406646	(26210970)	C	AluJr	SINE/Alu	(10)	302	2	1854738
1449	24.1	3.8	6.8	chr19	32566792	32566862	(26050754)	+	MER63B	DNA/hAT-Blackjack	6	74	(362)	1855053
420	22.5	6.2	0.8	chr19	32675569	32675689	(25941927)	+	MIR3	SINE/MIR	27	154	(54)	1855283
687	1.3	0.0	0.0	chr19	33177057	33177131	(25440485)	+	tRNA-Thr-ACY	tRNA	1	75	(2)	1856355
13	19.7	7.0	3.3	chr19	33780745	33780801	(24836815)	+	(CTGC)n	Simple_repeat	1	61	(0)	1857298
29	18.4	5.3	7.6	chr19	34254583	34254771	(24362845)	+	G-rich	Low_complexity	1	184	(0)	1858260
992	25.9	12.2	3.9	chr19	34998637	34999371	(23618245)	C	L2b	LINE/L2	(115)	3260	2454	1859478
973	31.8	4.5	5.7	chr19	35055948	35056437	(23561179)	+	L2a	LINE/L2	2925	3408	(18)	1859610
19	16.2	0.0	2.3	chr19	35269706	35269748	(23347868)	+	(GGCG)n	Simple_repeat	1	43	(0)	1860065
19	29.6	1.1	3.4	chr19	35868644	35868686	(22748930)	+	(CCGCTG)n	Simple_repeat	1	74	(20)	1861338
19	22.0	0.0	0.0	chr19	35868687	35868730	(22748886)	+	(GCT)n	Simple_repeat	1	44	(0)	1861339
19	29.6	1.1	3.4	chr19	35868731	35868740	(22748876)	+	(CCGCTG)n	Simple_repeat	75	94	(0)	1861338
11	21.6	10.9	0.0	chr19	36528911	36528974	(22088642)	+	(TTGTGTGA)n	Simple_repeat	1	71	(0)	1862727
15	16.8	0.0	0.0	chr19	36528950	36528976	(22088640)	+	(GT)n	Simple_repeat	1	27	(0)	1862728
5873	14.3	3.3	5.7	chr19	37227520	37228541	(21389075)	C	LTR13	LTR/ERVK	(8)	999	3	1864068
21	19.9	2.2	0.0	chr19	37906671	37906716	(20710900)	+	(CG)n	Simple_repeat	1	47	(0)	1865341
432	34.0	5.5	2.5	chr19	38250588	38250868	(20366748)	+	L2c	LINE/L2	3098	3387	(0)	1866228
871	9.3	0.8	0.0	chr19	38832012	38832129	(19785487)	+	AluYc	SINE/Alu	181	299	(0)	1867545
14	27.6	1.7	3.3	chr19	38870110	38870169	(19747447)	+	(GCC)n	Simple_repeat	1	61	(0)	1867628
243	38.2	5.9	5.0	chr19	38877813	38878030	(19739586)	C	L2a	LINE/L2	(1)	3425	3206	1867651
18	3.8	0.0	3.5	chr19	38878057	38878090	(19739526)	+	(GGAGG)n	Simple_repeat	1	32	(0)	1867652
646	11.1	1.1	0.0	chr19	38887455	38887544	(19730072)	C	AluJo	SINE/Alu	(200)	112	22	1867675
2314	9.7	1.3	1.0	chr19	38887745	38888053	(19729563)	C	AluSg	SINE/Alu	(0)	310	1	1867676
499	30.2	2.9	2.3	chr19	39131814	39131986	(19485630)	+	MIRb	SINE/MIR	81	254	(14)	1868349
13	22.5	2.0	3.9	chr19	39834170	39834219	(18783397)	+	(CCTCC)n	Simple_repeat	1	51	(0)	1869713
14	20.5	2.6	0.0	chr19	40542221	40542259	(18075357)	+	(TCTCTG)n	Simple_repeat	1	40	(0)	1871366
16	0.0	0.0	0.0	chr19	41859443	41859460	(16758156)	+	(T)n	Simple_repeat	1	18	(0)	1874069
17	15.6	2.1	4.2	chr19	42133305	42133351	(16484265)	+	(CCCCT)n	Simple_repeat	1	48	(0)	1874651
11	17.4	0.0	5.6	chr19	43503931	43503966	(15113650)	+	(CTGCCT)n	Simple_repeat	1	36	(0)	1876955
289	24.8	1.9	0.7	chr19	43526391	43526481	(15091135)	+	MSR1	Satellite	1	92	(5)	1877016
242	23.0	4.8	6.5	chr19	43526721	43526827	(15090789)	+	MSR1	Satellite	1	105	(6)	1877017
14	24.2	2.3	0.0	chr19	43533433	43533476	(15084140)	+	(GGCAGC)n	Simple_repeat	1	45	(0)	1877038
13	26.1	2.4	0.0	chr19	43619558	43619599	(14998017)	+	(CGG)n	Simple_repeat	1	43	(0)	1877255
18	8.0	0.0	0.0	chr19	43670083	43670109	(14947507)	+	(AGC)n	Simple_repeat	1	27	(0)	1877379
2394	9.4	0.7	0.3	chr19	44259489	44259797	(14357819)	C	AluSg	SINE/Alu	(0)	310	1	1878455
447	29.1	6.5	1.2	chr19	44260179	44260338	(14357278)	+	MIR	SINE/MIR	64	232	(30)	1878456
201	25.0	9.6	9.6	chr19	44906741	44906855	(13710761)	+	MIRc	SINE/MIR	42	156	(112)	1879937
28	0.0	5.3	2.5	chr19	44906856	44906893	(13710723)	+	(GTT)n	Simple_repeat	1	40	(0)	1879938
245	18.6	7.8	0.0	chr19	45187681	45187739	(13429877)	C	MER91B	DNA/hAT-Tip100	(47)	143	80	1880646
529	17.8	12.6	0.8	chr19	45187745	45187863	(13429753)	C	MER2	DNA/TcMar-Tigger	(1)	344	210	1880647
1314	9.3	8.2	14.1	chr19	45187877	45188031	(13429585)	C	L1MA2	LINE/L1	(0)	6304	6149	1880648
803	0.0	0.0	0.0	chr19	45478602	45478687	(13138929)	C	tRNA-SeC(e)-TGA	tRNA	(3)	86	1	1881421
20	3.8	0.0	0.0	chr19	45509518	45509544	(13108072)	+	(CCA)n	Simple_repeat	1	27	(0)	1881496
247	30.5	2.5	2.4	chr19	45509756	45509890	(13107726)	C	MIR3	SINE/MIR	(62)	168	33	1881497
217	31.4	6.8	7.5	chr19	45643883	45644074	(12973542)	C	MIR1_Amn	SINE/MIR	(14)	194	1	1881877
29	27.5	1.7	3.4	chr19	46634838	46634953	(11982663)	+	GA-rich	Low_complexity	1	118	(0)	1884158
236	31.0	6.5	6.0	chr19	47227046	47227213	(11390403)	C	MIR1_Amn	SINE/MIR	(51)	179	11	1885598
1538	15.8	2.1	2.8	chr19	47296010	47296300	(11321316)	+	AluJr	SINE/Alu	1	289	(23)	1885781
489	22.3	0.0	1.0	chr19	47296377	47296480	(11321136)	C	MER5A1	DNA/hAT-Charlie	(0)	166	64	1885782
42	7.2	1.7	0.0	chr19	47296481	47296540	(11321076)	+	(TCCC)n	Simple_repeat	1	61	(0)	1885783
1060	15.2	1.1	4.3	chr19	47296565	47296709	(11320907)	C	AluSx	SINE/Alu	(0)	312	172	1885784
439	25.1	5.0	5.0	chr19	47427349	47427570	(11190046)	+	LTR33	LTR/ERVL	280	501	(14)	1886141
284	32.2	12.2	5.3	chr19	47427626	47427907	(11189709)	+	L2	LINE/L2	2658	2961	(458)	1886142
413	27.5	13.1	6.1	chr19	47511610	47511850	(11105766)	+	MIRb	SINE/MIR	3	268	(0)	1886318
16	15.4	2.8	0.0	chr19	47610607	47610642	(11006974)	+	(CACC)n	Simple_repeat	1	37	(0)	1886575
34	2.9	0.0	0.0	chr19	47745861	47745896	(10871720)	+	(GTCGGGG)n	Simple_repeat	1	36	(0)	1886958
524	14.6	1.0	0.0	chr19	47745971	47746066	(10871550)	+	MER53	DNA/hAT	1	97	(96)	1886959
1331	15.4	6.5	4.9	chr19	47778053	47778176	(10839440)	C	AluJb	SINE/Alu	(178)	134	2	1887043
2289	8.6	0.3	5.2	chr19	48400784	48401110	(10216506)	+	AluSx	SINE/Alu	1	311	(1)	1888662
21	30.9	0.0	3.3	chr19	48713895	48713984	(9903632)	+	(CCGGAG)n	Simple_repeat	1	90	(0)	1889449
2325	8.5	0.0	2.0	chr19	48858340	48858644	(9758972)	+	AluSx1	SINE/Alu	1	299	(13)	1889803
913	27.4	10.5	3.2	chr19	49084893	49085054	(9532562)	+	L2a	LINE/L2	3262	3426	(0)	1890340
12	15.3	3.5	0.0	chr19	49104483	49104511	(9513105)	+	(GTCT)n	Simple_repeat	1	30	(0)	1890387
12	17.4	4.9	2.3	chr19	49104791	49104831	(9512785)	+	(TTCTGCC)n	Simple_repeat	1	43	(0)	1890388
13	17.2	3.9	5.7	chr19	49119142	49119192	(9498424)	+	(TCCCGCC)n	Simple_repeat	1	53	(0)	1890418
453	30.0	1.8	4.8	chr19	49421609	49421776	(9195840)	C	MIRb	SINE/MIR	(91)	177	15	1891073
13	18.0	6.8	0.0	chr19	49808939	49808982	(8808634)	+	G-rich	Low_complexity	1	47	(0)	1891992
702	3.6	0.0	0.7	chr19	50434963	50435110	(8182506)	C	MSR1	Satellite	(20)	146	1	1893501
12	28.1	1.7	3.3	chr19	50500436	50500494	(8117122)	+	(TCCCCC)n	Simple_repeat	1	60	(0)	1893651
15	18.4	5.5	5.2	chr19	50564704	50564758	(8052858)	+	GA-rich	Low_complexity	1	58	(0)	1893803
13	11.2	3.2	3.1	chr19	51719643	51719673	(6897943)	+	(GCC)n	Simple_repeat	1	32	(0)	1896112
34	0.0	0.0	0.0	chr19	53980058	53980086	(4637530)	+	(GT)n	Simple_repeat	1	29	(0)	1900731
15	23.2	0.0	0.0	chr19	53980087	53980114	(4637502)	+	(GC)n	Simple_repeat	1	28	(0)	1900732
309	30.8	9.7	5.4	chr19	54966086	54966253	(3651363)	+	MER5B	DNA/hAT-Charlie	1	176	(2)	1902672
15	22.7	0.0	0.0	chr19	55160495	55160526	(3457090)	+	GA-rich	Low_complexity	1	32	(0)	1903121
12	20.1	5.0	0.0	chr19	55166455	55166494	(3451122)	+	(CGCCCCT)n	Simple_repeat	1	42	(0)	1903139
1779	11.8	10.6	0.0	chr19	55216200	55216462	(3401154)	C	AluSx	SINE/Alu	(15)	297	4	1903254
196	29.7	1.5	1.5	chr19	55280120	55280184	(3337432)	C	OldhAT1	DNA/hAT-Ac	(750)	2098	2034	1903374
32	10.4	1.9	1.8	chr19	55338553	55338606	(3279010)	+	(AC)n	Simple_repeat	1	55	(0)	1903537
564	26.6	9.2	0.0	chr19	55338695	55338912	(3278704)	+	Tigger3c	DNA/TcMar-Tigger	363	602	(0)	1903538
16	4.5	0.0	0.0	chr19	55338918	55338940	(3278676)	+	(AAAC)n	Simple_repeat	1	23	(0)	1903539
11	29.2	3.7	0.0	chr19	55354112	55354165	(3263451)	+	(CCCCTA)n	Simple_repeat	1	56	(0)	1903563
36	26.2	5.3	2.2	chr19	55383774	55383943	(3233673)	+	G-rich	Low_complexity	1	179	(0)	1903624
50	0.0	0.0	0.0	chr19	55488873	55488915	(3128701)	+	(TG)n	Simple_repeat	1	43	(0)	1903830
442	21.7	20.7	1.8	chr19	55600964	55601127	(3016489)	C	MIRb	SINE/MIR	(16)	252	50	1904124
270	25.3	1.2	2.5	chr19	55631587	55631667	(2985949)	+	MIR3	SINE/MIR	101	180	(28)	1904194
2430	7.3	0.7	1.6	chr19	55631878	55632191	(2985425)	+	AluSp	SINE/Alu	2	312	(1)	1904195
2577	4.6	1.3	0.0	chr19	55653385	55653688	(2963928)	+	AluSc8	SINE/Alu	2	309	(2)	1904234
514	21.8	1.9	0.0	chr19	56116475	56116575	(2501041)	+	AluJo	SINE/Alu	32	134	(178)	1905135
15	13.9	0.0	0.0	chr19	56116621	56116644	(2500972)	+	(AC)n	Simple_repeat	1	24	(0)	1905136
215	32.5	8.9	1.6	chr19	56116721	56116845	(2500771)	+	L2c	LINE/L2	3026	3160	(227)	1905137
44	3.1	2.7	5.3	chr19	57487527	57487600	(1130016)	+	(ATCTCC)n	Simple_repeat	1	76	(0)	1907880
58	1.8	0.0	0.0	chr19	58229267	58229323	(388293)	+	(GGGTGGGACT)n	Simple_repeat	1	57	(0)	1909145
232	23.4	6.4	1.3	chr19	58466589	58466706	(150910)	C	MIR	SINE/MIR	(133)	135	6	1909576
11	24.3	5.5	1.7	chr19	58573164	58573218	(44398)	+	(CCTTCC)n	Simple_repeat	1	58	(0)	1909747
817	22.6	12.0	0.4	chr2	1593372	1593651	(240599878)	+	MLT1A0	LTR/ERVL-MaLR	49	365	(0)	1912335
1570	16.3	1.1	0.0	chr2	1704641	1704904	(240488625)	C	MER4A1	LTR/ERV1	(205)	267	1	1912430
26	6.5	0.0	7.0	chr2	2180775	2180831	(240012698)	+	(TGTACCTGTG)n	Simple_repeat	1	57	(0)	1912928
23	23.6	0.0	2.9	chr2	2602076	2602143	(239591386)	+	(ATAA)n	Simple_repeat	1	68	(0)	1913465
57	30.2	2.5	3.5	chr2	2848824	2849106	(239344423)	+	GA-rich	Low_complexity	1	290	(0)	1913736
272	31.8	6.9	3.3	chr2	3302704	3302856	(238890673)	+	L2b	LINE/L2	3185	3343	(32)	1914291
188	30.4	14.5	1.8	chr2	3302959	3303072	(238890457)	+	MIRb	SINE/MIR	119	249	(19)	1914292
195	28.3	14.1	2.1	chr2	3378179	3378344	(238815185)	C	MIR	SINE/MIR	(42)	226	41	1914391
18	15.0	0.0	0.0	chr2	6772367	6772396	(235421133)	+	(CT)n	Simple_repeat	1	30	(0)	1918995
604	28.2	10.7	8.2	chr2	6866503	6866992	(235326537)	+	Tigger8	DNA/TcMar-Tigger	63	566	(101)	1919131
12	11.9	0.0	6.5	chr2	7378352	7378382	(234815147)	+	(CTCAG)n	Simple_repeat	1	31	(0)	1919826
357	7.0	0.0	0.0	chr2	8571506	8571548	(233621981)	C	AluSp	SINE/Alu	(18)	295	253	1921581
1458	22.4	4.7	1.1	chr2	10030269	10030620	(232162909)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1924040
11	30.2	3.7	0.0	chr2	10030692	10030745	(232162784)	+	A-rich	Low_complexity	1	56	(0)	1924041
1224	20.9	4.0	4.6	chr2	10408892	10409217	(231784312)	C	MER33	DNA/hAT-Charlie	(0)	324	1	1924718
238	33.7	1.1	1.1	chr2	10835662	10835751	(231357778)	+	MIRc	SINE/MIR	115	204	(64)	1925571
292	32.2	11.7	4.7	chr2	11010121	11010524	(231183005)	C	L2b	LINE/L2	(18)	3357	2922	1925870
16	0.0	0.0	0.0	chr2	11693204	11693220	(230500309)	+	(T)n	Simple_repeat	1	17	(0)	1927100
227	26.9	8.2	2.5	chr2	11693249	11693328	(230500201)	+	MER5B	DNA/hAT-Charlie	94	178	(0)	1927101
186	32.2	16.7	0.0	chr2	12314642	12314756	(229878773)	C	MIRc	SINE/MIR	(53)	215	78	1928096
80	1.4	0.0	0.0	chr2	13227518	13227590	(228965939)	+	(CA)n	Simple_repeat	1	73	(0)	1929542
2809	23.1	4.1	2.9	chr2	13227637	13228360	(228965169)	C	LTR1F2	LTR/ERV1	(0)	739	7	1929543
1455	18.8	6.3	3.1	chr2	13616485	13616765	(228576764)	+	MLT1A1	LTR/ERVL-MaLR	74	368	(40)	1930058
2103	15.1	3.4	0.8	chr2	13616766	13617133	(228576396)	+	THE1D	LTR/ERVL-MaLR	4	381	(0)	1930059
12	6.6	12.5	0.0	chr2	14634375	14634406	(227559123)	+	(GCCCGC)n	Simple_repeat	1	36	(0)	1931491
193	29.2	0.0	2.0	chr2	15732672	15732720	(226460809)	C	MIR	SINE/MIR	(89)	173	126	1933208
59	3.5	0.0	0.0	chr2	16293391	16293449	(225900080)	+	(AC)n	Simple_repeat	1	59	(0)	1934293
11	20.8	6.8	0.0	chr2	20823252	20823295	(221370234)	+	(TTTTCA)n	Simple_repeat	1	47	(0)	1940916
1205	16.7	20.6	1.8	chr2	21775044	21775317	(220418212)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	1942185
920	27.0	8.3	3.5	chr2	23375259	23375634	(218817895)	C	MLT1J1	LTR/ERVL-MaLR	(2)	442	47	1944299
246	14.1	14.7	1.5	chr2	23375651	23375715	(218817814)	C	MLT1J1	LTR/ERVL-MaLR	(350)	94	20	1944299
233	34.7	0.0	1.3	chr2	23375735	23375810	(218817719)	+	MER5A	DNA/hAT-Charlie	115	189	(0)	1944300
17	7.8	0.0	0.0	chr2	24359634	24359660	(217833869)	+	(AAAT)n	Simple_repeat	1	27	(0)	1945934
192	28.7	19.0	0.9	chr2	24884184	24884299	(217309230)	+	MER5A	DNA/hAT-Charlie	20	161	(28)	1946872
2507	7.5	0.0	0.3	chr2	24884470	24884776	(217308753)	C	AluSx1	SINE/Alu	(6)	306	1	1946873
233	37.0	14.1	1.9	chr2	24885600	24885966	(217307563)	+	L2b	LINE/L2	2659	3077	(342)	1946875
533	1.4	0.0	17.8	chr2	27050782	27050871	(215142658)	+	tRNA-Tyr-TAC	tRNA	1	74	(2)	1951107
13	25.6	3.4	3.3	chr2	27217329	27217387	(214976142)	+	(CCG)n	Simple_repeat	1	61	(0)	1951395
2260	9.9	0.7	0.0	chr2	27407768	27408060	(214785469)	+	AluSp	SINE/Alu	2	296	(17)	1951756
276	27.6	1.1	13.0	chr2	27408061	27408116	(214785413)	+	MIR3	SINE/MIR	152	195	(13)	1951755
235	31.1	8.5	4.0	chr2	27489298	27489421	(214704108)	+	L2b	LINE/L2	3229	3358	(17)	1951907
43	13.8	0.0	0.0	chr2	39779337	39779409	(202414120)	+	(GGGAGA)n	Simple_repeat	1	73	(0)	1971734
563	0.0	0.0	20.4	chr2	42810536	42810628	(199382901)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	1976362
11	13.4	4.2	8.0	chr2	44362005	44362052	(197831477)	+	(GAGACGC)n	Simple_repeat	1	50	(0)	1979091
212	35.3	2.1	4.7	chr2	44653061	44653253	(197540276)	+	L2c	LINE/L2	3165	3352	(35)	1979549
192	22.4	2.0	0.0	chr2	44952839	44952887	(197240642)	C	MIRc	SINE/MIR	(137)	131	82	1979999
192	22.0	10.6	4.8	chr2	46941842	46941903	(195251626)	+	Tigger19a	DNA/TcMar-Tigger	153	218	(105)	1983106
14	7.8	3.7	0.0	chr2	47369093	47369119	(194824410)	+	(GGGGC)n	Simple_repeat	1	28	(0)	1983925
306	22.2	2.1	5.5	chr2	47369285	47369484	(194824045)	+	LTR41B	LTR/ERVL	252	444	(314)	1983926
24	12.3	2.3	0.0	chr2	48440801	48440844	(193752685)	+	(GGC)n	Simple_repeat	1	45	(0)	1985972
369	30.6	3.9	2.8	chr2	48901053	48901233	(193292296)	C	MIRb	SINE/MIR	(18)	250	63	1986700
50	0.0	0.0	0.0	chr2	51032511	51032553	(191160976)	+	(AG)n	Simple_repeat	1	43	(0)	1989562
32	2.7	2.6	0.0	chr2	53787126	53787163	(188406366)	+	(CCT)n	Simple_repeat	1	39	(0)	1993127
12	23.2	5.1	3.2	chr2	54457666	54457724	(187735805)	+	(GGCCC)n	Simple_repeat	1	62	(0)	1994403
393	29.4	10.9	7.5	chr2	55112221	55112459	(187081070)	C	MIRb	SINE/MIR	(0)	268	21	1995315
56	20.4	1.4	2.8	chr2	55269449	55269589	(186923940)	+	(TTTC)n	Simple_repeat	1	143	(0)	1995600
421	25.7	17.3	1.7	chr2	55756889	55757189	(186436340)	C	L1MEi	LINE/L1	(961)	1251	894	1996530
2465	13.9	2.6	2.3	chr2	55757191	55757617	(186435912)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1996531
13	17.5	0.0	2.9	chr2	55923616	55923649	(186269880)	+	(CTCAC)n	Simple_repeat	1	34	(0)	1996753
18	23.8	3.5	1.7	chr2	55923816	55923873	(186269656)	+	GA-rich	Low_complexity	1	60	(0)	1996754
22	5.8	2.6	2.6	chr2	56184633	56184670	(186008859)	+	(GGC)n	Simple_repeat	1	39	(0)	1997104
13	21.0	4.5	0.0	chr2	61470531	61470574	(180722955)	+	(CCGCCCG)n	Simple_repeat	1	46	(0)	2004393
945	14.7	2.5	0.0	chr2	63764040	63764195	(178429334)	C	L1MB5	LINE/L1	(8)	6166	6007	2008291
14	20.2	5.2	6.2	chr2	70142568	70142644	(172050885)	+	(CCCGTC)n	Simple_repeat	1	81	(0)	2018487
12	21.3	4.4	2.1	chr2	70979145	70979189	(171214340)	+	(CCGCG)n	Simple_repeat	1	47	(0)	2019926
416	24.6	4.4	0.0	chr2	71157088	71157217	(171036312)	C	MIR3	SINE/MIR	(34)	174	39	2020221
15	11.7	0.0	0.0	chr2	72144857	72144884	(170048645)	+	(GCGGG)n	Simple_repeat	1	28	(0)	2021630
19	0.0	0.0	0.0	chr2	72860028	72860048	(169333481)	+	(A)n	Simple_repeat	1	21	(0)	2022703
19	15.8	2.4	0.0	chr2	72917421	72917462	(169276067)	+	(CCCGC)n	Simple_repeat	1	43	(0)	2022809
815	8.1	9.4	0.6	chr2	72917641	72917814	(169275715)	+	LTR2752	LTR/ERV1	947	1137	(126)	2022810
1049	5.0	0.0	0.0	chr2	74465574	74465694	(167727835)	+	AluSx3	SINE/Alu	179	299	(12)	2025437
13	8.3	0.0	6.7	chr2	74648174	74648203	(167545326)	+	(GCCCA)n	Simple_repeat	1	30	(0)	2025726
13	26.3	0.0	0.0	chr2	74654267	74654307	(167539222)	+	(GCCGA)n	Simple_repeat	1	41	(0)	2025740
16	13.8	0.0	8.3	chr2	74654533	74654580	(167538949)	+	(ACGCCC)n	Simple_repeat	1	48	(0)	2025741
1891	8.8	0.0	1.2	chr2	74919606	74919854	(167273675)	C	AluSz6	SINE/Alu	(66)	246	1	2026185
12	15.3	5.3	2.5	chr2	75053794	75053831	(167139698)	+	(TTGTTA)n	Simple_repeat	1	40	(0)	2026413
416	25.4	8.8	9.4	chr2	75075601	75076032	(167117497)	+	L1MEd	LINE/L1	2084	2552	(3594)	2026451
324	21.1	4.4	2.7	chr2	75076086	75076176	(167117353)	+	MIR3	SINE/MIR	69	161	(47)	2026452
710	22.9	22.8	1.6	chr2	75608906	75609296	(166584233)	+	MamGypLTR3	LTR/Gypsy	175	650	(244)	2027222
274	23.6	0.0	0.0	chr2	75609391	75609445	(166584084)	+	MamGypLTR3	LTR/Gypsy	827	881	(13)	2027222
37	14.4	1.4	0.0	chr2	79855187	79855255	(162338274)	+	(TCTCTC)n	Simple_repeat	1	70	(0)	2032878
330	25.2	2.5	2.5	chr2	80366225	80366342	(161827187)	+	MER103C	DNA/hAT-Charlie	15	132	(165)	2033650
12	7.4	10.3	0.0	chr2	85611846	85611874	(156581655)	+	(GGC)n	Simple_repeat	1	32	(0)	2041125
456	32.5	3.8	0.4	chr2	85679047	85679278	(156514251)	C	MLT1I	LTR/ERVL-MaLR	(42)	369	130	2041276
544	27.5	4.2	4.6	chr2	85679606	85679630	(156513899)	+	L2a	LINE/L2	3187	3211	(215)	2041281
15	12.9	2.8	2.7	chr2	85758692	85758727	(156434802)	+	G-rich	Low_complexity	1	37	(0)	2041451
14	20.2	0.0	0.0	chr2	86195447	86195480	(155998049)	+	(GCGT)n	Simple_repeat	1	34	(0)	2042218
15	23.7	0.0	7.3	chr2	86807811	86807878	(155385651)	+	G-rich	Low_complexity	1	68	(0)	2043240
284	26.3	8.3	2.2	chr2	86808329	86808464	(155385065)	C	MIR3	SINE/MIR	(8)	200	56	2043241
193	28.8	9.6	4.6	chr2	88077429	88077537	(154115992)	+	MIRc	SINE/MIR	145	259	(9)	2045250
2389	6.0	3.5	0.0	chr2	95076407	95076705	(147116824)	+	AluSq2	SINE/Alu	1	310	(3)	2050153
4272	11.6	4.9	1.5	chr2	96209232	96209895	(145983634)	+	LTR8	LTR/ERV1	4	691	(0)	2051757
11	27.2	2.0	2.0	chr2	97995932	97995981	(144197548)	+	G-rich	Low_complexity	1	51	(0)	2054374
15	8.5	0.0	0.0	chr2	98086830	98086854	(144106675)	+	(TTCA)n	Simple_repeat	1	25	(0)	2054528
2412	9.0	0.0	0.0	chr2	98092364	98092662	(144100867)	+	AluSg	SINE/Alu	2	300	(10)	2054537
18	18.6	0.0	5.6	chr2	101252681	101252734	(140940795)	+	(CGCCC)n	Simple_repeat	1	54	(0)	2059271
12	19.1	2.6	2.6	chr2	101308488	101308525	(140885004)	+	(GCCCGG)n	Simple_repeat	1	39	(0)	2059376
247	31.9	12.8	1.3	chr2	101399362	101399520	(140794009)	C	X6A_LINE	LINE/CR1	(704)	376	197	2059529
14	18.3	2.7	0.0	chr2	102736724	102736760	(139456769)	+	(TCCTGTC)n	Simple_repeat	1	38	(0)	2061466
195	29.7	10.6	1.0	chr2	105143548	105143649	(137049880)	+	MIR3	SINE/MIR	45	157	(51)	2064464
15	10.0	0.0	0.0	chr2	105143794	105143815	(137049714)	+	(AC)n	Simple_repeat	1	22	(0)	2064465
14	12.5	0.0	3.5	chr2	105143815	105143855	(137049674)	+	(CCT)n	Simple_repeat	1	39	(0)	2064466
13	12.8	5.9	0.0	chr2	107986532	107986565	(134206964)	+	(CCTGCGC)n	Simple_repeat	1	36	(0)	2068658
13	23.7	1.9	3.7	chr2	107986619	107986671	(134206858)	+	(CCGCA)n	Simple_repeat	1	54	(0)	2068659
265	29.2	6.6	5.8	chr2	108448919	108449038	(133744491)	C	MIRc	SINE/MIR	(123)	145	25	2069252
15	14.0	2.2	6.5	chr2	108449228	108449272	(133744257)	+	(GCG)n	Simple_repeat	1	46	(0)	2069253
720	13.8	2.9	4.3	chr2	108786254	108786391	(133407138)	C	FLAM_A	SINE/Alu	(6)	136	1	2069806
566	31.1	12.8	1.8	chr2	109069796	109070382	(133123147)	C	L2a	LINE/L2	(1)	3425	2761	2070225
2001	14.3	1.9	1.3	chr2	109659096	109659402	(132534127)	+	AluSx	SINE/Alu	2	310	(2)	2071055
13	20.9	0.0	0.0	chr2	110205055	110205087	(131988442)	+	(CCGCC)n	Simple_repeat	1	33	(0)	2071881
12	4.5	4.0	3.9	chr2	111120579	111120603	(131072926)	+	(GCC)n	Simple_repeat	1	26	(0)	2073127
2408	8.8	0.0	0.3	chr2	112255274	112255581	(129937948)	C	AluSc	SINE/Alu	(2)	307	1	2074795
14	10.1	6.2	0.0	chr2	113889918	113889949	(128303580)	+	G-rich	Low_complexity	1	34	(0)	2077575
29	0.0	0.0	0.0	chr2	118014107	118014133	(124179396)	+	(GCC)n	Simple_repeat	1	27	(0)	2083040
20	3.7	0.0	0.0	chr2	119760531	119760558	(122432971)	+	(AAAC)n	Simple_repeat	1	28	(0)	2085917
20	0.0	0.0	0.0	chr2	119760734	119760755	(122432774)	+	(T)n	Simple_repeat	1	22	(0)	2085918
341	24.9	18.0	0.6	chr2	120443232	120443405	(121750124)	+	MIR	SINE/MIR	38	248	(14)	2086976
2360	9.9	0.6	0.3	chr2	124640845	124641156	(117552373)	+	AluSp	SINE/Alu	1	313	(0)	2093454
918	23.4	6.9	0.0	chr2	128233846	128234102	(113959427)	+	MER119	DNA/hAT-Charlie	303	578	(5)	2098930
389	26.7	8.3	5.8	chr2	128305982	128306125	(113887404)	+	MIRb	SINE/MIR	19	164	(66)	2099020
307	21.9	0.0	0.0	chr2	130337127	130337199	(111856330)	C	tRNA-Glu-GAG_	tRNA	(2)	73	1	2101680
13	23.6	6.0	0.0	chr2	130755852	130755901	(111437628)	+	(GCTGG)n	Simple_repeat	1	53	(0)	2102285
242	26.2	11.9	8.7	chr2	131153731	131153868	(111039661)	+	MIR	SINE/MIR	28	170	(92)	2102930
248	26.8	4.3	3.5	chr2	131802146	131802261	(110391268)	+	MIRb	SINE/MIR	115	231	(37)	2103744
1590	11.5	0.5	1.9	chr2	136357470	136357678	(105835851)	+	AluSx	SINE/Alu	1	206	(106)	2110569
790	29.2	7.8	1.4	chr2	138596426	138596870	(103596659)	+	LTR86A2	LTR/ERVL	30	509	(4)	2113653
209	35.3	7.4	4.5	chr2	139583734	139583816	(102609713)	C	MIRc	SINE/MIR	(62)	206	119	2115009
915	25.4	5.6	0.0	chr2	141728958	141729193	(100464336)	+	UCON51	LTR?	1	250	(0)	2117869
181	9.1	0.0	8.3	chr2	144403873	144403908	(97789621)	+	X5B_LINE	LINE/CR1	71	103	(82)	2121373
16	5.2	0.0	0.0	chr2	144404139	144404158	(97789371)	+	(GA)n	Simple_repeat	1	20	(0)	2121374
20	4.3	0.0	0.0	chr2	144439131	144439154	(97754375)	+	(A)n	Simple_repeat	1	24	(0)	2121419
42	13.6	2.3	2.3	chr2	144520396	144520481	(97673048)	+	(CCTC)n	Simple_repeat	1	88	(0)	2121497
229	35.7	4.4	0.0	chr2	151758078	151758206	(90435323)	+	MIRc	SINE/MIR	132	266	(2)	2131299
20	16.4	0.0	0.0	chr2	156332922	156332955	(85860574)	+	(T)n	Simple_repeat	1	34	(0)	2137288
14	11.9	8.1	0.0	chr2	162344146	162344182	(79849347)	+	(CCTGCA)n	Simple_repeat	1	40	(0)	2145594
15	17.9	0.0	4.8	chr2	165794145	165794186	(76399343)	+	(CTCCGC)n	Simple_repeat	1	42	(0)	2150134
1642	26.7	6.7	2.6	chr2	167924045	167924690	(74268839)	+	L1ME4b	LINE/L1	156	829	(63)	2152821
801	25.3	13.7	5.4	chr2	167924696	167925083	(74268446)	+	LTR16	LTR/ERVL	4	428	(10)	2152822
427	28.5	8.9	2.8	chr2	168567649	168567864	(73625665)	C	Charlie13a	DNA/hAT-Charlie	(326)	1188	958	2153754
830	22.9	2.6	1.8	chr2	168567936	168568162	(73625367)	C	Charlie13a	DNA/hAT-Charlie	(1252)	262	34	2153753
11	28.2	0.0	2.2	chr2	170929816	170929860	(71263669)	+	(GGAGCC)n	Simple_repeat	1	45	(0)	2157501
16	19.5	1.9	7.3	chr2	172000139	172000192	(70193337)	+	(AC)n	Simple_repeat	1	55	(0)	2159420
4031	19.5	12.6	6.6	chr2	172578230	172579605	(69613924)	C	L1MB7	LINE/L1	(6047)	1470	1	2160350
913	23.4	13.3	0.4	chr2	174536078	174536339	(67657190)	C	L1ME3	LINE/L1	(2)	6160	5860	2163442
244	27.8	8.7	1.6	chr2	174830621	174830748	(67362781)	+	MamRTE1	LINE/RTE-BovB	3446	3583	(229)	2163886
228	29.4	21.3	0.6	chr2	177229706	177229869	(64963660)	+	L2a	LINE/L2	2951	3157	(269)	2167309
207	25.5	0.0	0.0	chr2	178073265	178073311	(64120218)	+	L2a	LINE/L2	3373	3419	(7)	2168499
27706	2.3	0.0	0.0	chr2	185419435	185425462	(56768067)	C	L1PA2	LINE/L1	(2)	6153	126	2177781
16	26.1	3.4	0.0	chr2	186590241	186590299	(55603230)	+	G-rich	Low_complexity	1	61	(0)	2179278
19	18.4	4.5	4.3	chr2	190408282	190408366	(51785163)	+	(CCTCG)n	Simple_repeat	1	85	(0)	2184332
19	17.3	9.2	0.0	chr2	190408395	190408476	(51785053)	+	(CCGGCGCC)n	Simple_repeat	1	89	(0)	2184333
17	14.9	2.7	0.0	chr2	190408679	190408715	(51784814)	+	(CCTC)n	Simple_repeat	1	38	(0)	2184334
21	4.1	0.0	0.0	chr2	190648514	190648538	(51544991)	+	(T)n	Simple_repeat	1	25	(0)	2184671
370	30.0	15.7	5.8	chr2	194116544	194116890	(48076639)	+	L1MEc	LINE/L1	4897	5284	(1280)	2189277
2039	10.6	7.6	6.1	chr2	194116917	194117279	(48076250)	C	THE1D	LTR/ERVL-MaLR	(12)	369	1	2189280
44	26.5	1.6	5.2	chr2	196171682	196171870	(46021659)	+	G-rich	Low_complexity	1	192	(0)	2192007
13	25.0	2.0	2.0	chr2	196593698	196593746	(45599783)	+	(GGCTGA)n	Simple_repeat	1	50	(0)	2192635
181	31.6	6.9	0.0	chr2	196593880	196593974	(45599555)	+	MIRc	SINE/MIR	121	222	(46)	2192636
6649	21.8	8.8	2.2	chr2	196741717	196743551	(45449978)	C	L1PA11	LINE/L1	(4315)	2374	345	2192837
1720	11.4	0.8	0.0	chr2	197377901	197378136	(44815393)	C	AluSz	SINE/Alu	(74)	238	1	2193904
20	11.8	0.0	2.6	chr2	200510168	200510206	(41683323)	+	(GCCAC)n	Simple_repeat	1	39	(0)	2198448
265	28.4	11.0	2.6	chr2	200510338	200510468	(41683061)	C	MIRc	SINE/MIR	(121)	147	6	2198449
322	25.0	5.7	0.0	chr2	200889152	200889251	(41304278)	C	MER94	DNA/hAT-Blackjack	(6)	128	23	2199071
12	4.2	0.0	10.0	chr2	200963841	200963870	(41229659)	+	(CCTTT)n	Simple_repeat	1	30	(0)	2199238
18	23.3	2.0	0.0	chr2	209772220	209772269	(32421260)	+	(GCC)n	Simple_repeat	1	51	(0)	2213451
15	10.0	0.0	0.0	chr2	209772333	209772354	(32421175)	+	(AT)n	Simple_repeat	1	22	(0)	2213452
438	31.8	4.1	6.5	chr2	214185800	214186075	(28007454)	+	L2a	LINE/L2	3156	3424	(2)	2219280
534	27.3	0.0	2.7	chr2	217932529	217932675	(24260854)	C	MIR	SINE/MIR	(12)	250	108	2225178
254	4.8	4.5	0.0	chr2	217932806	217932847	(24260682)	+	Tigger15a	DNA/TcMar-Tigger	636	679	(36)	2225179
18	12.1	2.8	0.0	chr2	218568343	218568378	(23625151)	+	(CACG)n	Simple_repeat	1	37	(0)	2226392
15	7.5	0.0	6.2	chr2	218568413	218568444	(23625085)	+	(CCGCC)n	Simple_repeat	1	32	(0)	2226393
371	25.1	13.5	4.4	chr2	218879706	218879868	(23313661)	+	MIR3	SINE/MIR	13	193	(15)	2226966
231	35.1	8.7	2.9	chr2	219003334	219003506	(23190023)	C	MIRb	SINE/MIR	(31)	237	54	2227184
18	26.3	2.4	3.6	chr2	219178294	219178375	(23015154)	+	(CGGCGG)n	Simple_repeat	1	84	(0)	2227459
24	8.0	2.5	0.0	chr2	219229565	219229604	(22963925)	+	(GGCTC)n	Simple_repeat	1	41	(0)	2227555
290	18.4	12.6	0.0	chr2	221834218	221834293	(20359236)	+	L2b	LINE/L2	3038	3124	(251)	2231714
1728	27.7	7.0	9.9	chr2	221834370	221834928	(20358601)	+	LTR82B	LTR/ERVL	3	565	(265)	2231715
651	29.1	3.8	1.5	chr2	221965286	221965511	(20228018)	C	MIR	SINE/MIR	(1)	267	23	2231888
378	25.0	3.3	0.0	chr2	223545946	223546061	(18647468)	C	MER102c	DNA/hAT-Charlie	(0)	331	212	2234378
384	29.7	10.5	5.4	chr2	223546115	223546374	(18647155)	+	L1M2	LINE/L1	4165	4439	(1704)	2234379
49	20.2	3.3	5.9	chr2	223837625	223837804	(18355725)	+	(CCT)n	Simple_repeat	1	186	(0)	2234959
1139	21.5	14.9	7.1	chr2	223867983	223868463	(18325066)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	71	2235035
317	30.7	14.9	6.8	chr2	227164586	227164910	(15028619)	+	L1M4b	LINE/L1	317	672	(6195)	2240010
16	10.7	6.9	6.5	chr2	232420925	232420984	(9772545)	+	(CCGCCTG)n	Simple_repeat	1	60	(0)	2248644
17	10.0	3.1	0.0	chr2	232503174	232503205	(9690324)	+	(CCGCCC)n	Simple_repeat	1	33	(0)	2248757
21	12.9	0.0	4.3	chr2	234505123	234505168	(7688361)	+	A-rich	Low_complexity	1	46	(0)	2252086
212	29.6	15.2	1.4	chr2	234545216	234545362	(7648167)	+	Tigger19a	DNA/TcMar-Tigger	86	256	(67)	2252150
301	27.4	1.9	1.0	chr2	235504532	235504634	(6688895)	C	L1M5	LINE/L1	(428)	5745	5642	2253749
263	29.6	19.5	1.9	chr2	235660764	235660936	(6532593)	C	MIRb	SINE/MIR	(42)	226	13	2253967
283	27.4	6.7	0.0	chr2	237723840	237723923	(4469606)	C	L2b	LINE/L2	(25)	3350	3261	2256774
264	26.0	5.7	0.0	chr2	238109214	238109313	(4084216)	C	Charlie15a	DNA/hAT-Charlie	(0)	224	119	2257375
247	26.2	12.2	3.2	chr2	239532730	239532855	(2660674)	C	MIR3	SINE/MIR	(27)	181	43	2259026
13	11.4	0.0	6.2	chr2	239748149	239748180	(2445349)	+	A-rich	Low_complexity	1	32	(0)	2259282
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
238	31.1	4.3	2.0	chr2	241373628	241373739	(819790)	+	MIR	SINE/MIR	81	188	(42)	2261054
14	18.4	2.7	0.0	chr20	325309	325345	(64118822)	+	(CCGCC)n	Simple_repeat	1	38	(0)	2262663
12	21.8	2.7	0.0	chr20	325406	325442	(64118725)	+	(GCCCGA)n	Simple_repeat	1	38	(0)	2262664
14	14.0	4.9	2.3	chr20	325566	325606	(64118561)	+	(GCGGCGGA)n	Simple_repeat	1	43	(0)	2262665
51	0.0	0.0	0.0	chr20	348485	348528	(64095639)	+	(GT)n	Simple_repeat	1	44	(0)	2262726
581	22.4	17.0	0.6	chr20	635133	635294	(63808873)	C	MIR	SINE/MIR	(32)	230	37	2263382
367	32.7	1.8	4.1	chr20	842033	842204	(63601963)	C	MIRb	SINE/MIR	(31)	237	70	2263858
373	20.5	1.1	3.3	chr20	1966259	1966349	(62477818)	C	LTR16A1	LTR/ERVL	(128)	328	240	2266000
1087	25.9	10.4	1.8	chr20	2471024	2471471	(61972696)	+	L2a	LINE/L2	2926	3416	(10)	2267029
15	16.5	0.0	0.0	chr20	3163809	3163835	(61280332)	+	(AC)n	Simple_repeat	1	27	(0)	2268336
20	22.1	0.0	0.0	chr20	4687236	4687283	(59756884)	+	G-rich	Low_complexity	1	48	(0)	2271155
13	24.0	0.0	0.0	chr20	6006258	6006296	(58437871)	+	(GCGCGCG)n	Simple_repeat	1	39	(0)	2273691
15	11.6	0.0	3.3	chr20	9067826	9067855	(55376312)	+	(GGA)n	Simple_repeat	1	30	(0)	2278344
83	2.5	0.0	0.0	chr20	10034876	10034957	(54409210)	+	(GGCGGA)n	Simple_repeat	1	82	(0)	2279873
1337	24.3	8.1	5.4	chr20	10061520	10061962	(54382205)	C	LTR16A1	LTR/ERVL	(0)	456	1	2279916
19	21.2	6.2	0.0	chr20	10218724	10218788	(54225379)	+	(CGCCCC)n	Simple_repeat	1	69	(0)	2280187
847	29.2	7.5	6.2	chr20	11569107	11569592	(52874575)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	57	2282162
225	27.4	3.8	1.5	chr20	13259906	13259987	(51184180)	+	L2a	LINE/L2	3283	3422	(4)	2284622
345	25.5	14.0	4.4	chr20	15976216	15976375	(48467792)	+	Tigger19a	DNA/TcMar-Tigger	146	323	(0)	2288703
27	23.3	6.8	2.8	chr20	17569455	17569586	(46874581)	+	(CCCTCA)n	Simple_repeat	1	141	(0)	2291130
21	25.0	3.1	5.0	chr20	19430398	19430493	(45013674)	+	GA-rich	Low_complexity	1	99	(0)	2294111
21	38.5	1.8	4.5	chr20	19430661	19430879	(45013288)	+	(CACATA)n	Simple_repeat	1	223	(0)	2294112
42	7.7	6.7	3.2	chr20	19758154	19758242	(44685925)	+	(CCT)n	Simple_repeat	1	95	(0)	2294579
465	25.7	14.1	0.6	chr20	23128410	23128581	(41315586)	C	MIR	SINE/MIR	(55)	207	9	2299270
445	26.2	11.1	2.4	chr20	23358489	23358734	(41085433)	C	L1ME4a	LINE/L1	(169)	5955	5686	2299607
742	29.1	9.0	2.9	chr20	24578470	24578758	(39865409)	C	L2a	LINE/L2	(142)	3284	2979	2301082
4337	13.9	0.9	3.0	chr20	24578809	24579521	(39864646)	C	LTR62	LTR/ERVL	(11)	698	1	2301084
332	28.4	11.7	4.4	chr20	24874722	24874949	(39569218)	+	HAL1ME	LINE/L1	31	277	(2188)	2301454
530	22.8	13.6	0.0	chr20	25319969	25320139	(39124028)	+	LTR65	LTR/ERV1	472	669	(0)	2301969
1632	16.1	14.1	2.4	chr20	31572153	31572317	(32871850)	C	Tigger2a	DNA/TcMar-Tigger	(257)	177	2	2306290
257	21.6	11.7	0.0	chr20	31572327	31572418	(32871749)	C	MIR	SINE/MIR	(73)	195	96	2306293
14	13.4	6.1	0.0	chr20	31573028	31573060	(32871107)	+	GA-rich	Low_complexity	1	35	(0)	2306294
251	31.6	8.2	1.4	chr20	31603962	31604070	(32840097)	C	MIR3	SINE/MIR	(111)	157	42	2306389
195	30.2	5.5	2.3	chr20	31606870	31606957	(32837210)	C	MIR3	SINE/MIR	(50)	158	68	2306393
1807	15.2	1.0	0.3	chr20	31612699	31612830	(32831337)	C	AluSq2	SINE/Alu	(181)	132	1	2306409
26	0.0	0.0	0.0	chr20	31661753	31661777	(32782390)	+	(GGGCG)n	Simple_repeat	1	25	(0)	2306559
289	33.1	0.8	3.3	chr20	31661986	31662122	(32782045)	C	MIR	SINE/MIR	(46)	162	29	2306560
16	21.1	0.0	0.0	chr20	31723838	31723875	(32720292)	+	(GCCT)n	Simple_repeat	1	38	(0)	2306714
15	16.4	4.9	0.0	chr20	31860981	31861021	(32583146)	+	(CTGCTGG)n	Simple_repeat	1	43	(0)	2307036
13	4.1	3.7	3.6	chr20	31861116	31861142	(32583025)	+	(CCCTC)n	Simple_repeat	1	28	(0)	2307037
13	24.2	3.5	3.4	chr20	31861669	31861725	(32582442)	+	(GGCGG)n	Simple_repeat	1	59	(0)	2307039
13	10.0	5.9	2.8	chr20	31880001	31880034	(32564133)	+	G-rich	Low_complexity	1	36	(0)	2307086
28	3.3	0.0	0.0	chr20	31880262	31880292	(32563875)	+	(TCCA)n	Simple_repeat	1	31	(0)	2307087
278	28.6	8.2	0.9	chr20	31880297	31880409	(32563758)	C	L2b	LINE/L2	(0)	3375	3254	2307088
609	24.3	8.0	0.0	chr20	31952219	31952391	(32491776)	C	L2a	LINE/L2	(17)	3409	3222	2307264
321	25.9	4.7	0.0	chr20	31975437	31975517	(32468650)	+	L2c	LINE/L2	3075	3159	(228)	2307316
620	32.0	3.0	0.5	chr20	31984832	31985067	(32459100)	+	MIR	SINE/MIR	27	261	(1)	2307347
318	26.5	7.8	3.3	chr20	31994810	31994981	(32449186)	C	MIR	SINE/MIR	(0)	268	93	2307368
12	16.2	7.0	2.2	chr20	31995199	31995241	(32448926)	+	(GCAGCT)n	Simple_repeat	1	46	(0)	2307369
544	20.8	0.0	0.0	chr20	32012561	32012666	(32431501)	+	MER5A1	DNA/hAT-Charlie	1	106	(60)	2307410
327	26.0	11.9	0.0	chr20	32012719	32012814	(32431353)	+	L2b	LINE/L2	3267	3375	(0)	2307406
216	27.5	2.4	1.2	chr20	32012826	32012906	(32431261)	+	L2c	LINE/L2	3248	3329	(58)	2307411
416	25.7	0.7	16.9	chr20	32012946	32013028	(32431139)	C	MER5B	DNA/hAT-Charlie	(0)	178	120	2307412
58	18.0	2.2	2.1	chr20	32018162	32018298	(32425869)	+	G-rich	Low_complexity	1	140	(0)	2307429
13	27.6	3.8	3.7	chr20	32019458	32019536	(32424631)	+	(CTGCCC)n	Simple_repeat	1	82	(0)	2307431
626	30.4	8.8	2.2	chr20	32019708	32019939	(32424228)	C	MIR	SINE/MIR	(2)	260	12	2307432
398	32.0	2.4	0.0	chr20	32020033	32020154	(32424013)	C	L2b	LINE/L2	(1)	3374	3250	2307433
220	28.1	10.8	6.4	chr20	32029138	32029321	(32414846)	C	L2a	LINE/L2	(354)	3065	2866	2307445
937	26.8	2.1	0.9	chr20	32029309	32029538	(32414629)	C	MIR	SINE/MIR	(12)	250	18	2307460
183	0.0	6.7	0.0	chr20	32277391	32277418	(32166749)	C	MIR1_Amn	SINE/MIR	(85)	145	116	2308086
46	2.2	0.0	0.0	chr20	32277699	32277744	(32166423)	+	(CGC)n	Simple_repeat	1	46	(0)	2308087
395	29.8	2.7	2.2	chr20	32359380	32359561	(32084606)	C	MER5A	DNA/hAT-Charlie	(0)	189	7	2308301
46	27.1	2.6	6.6	chr20	32483590	32483856	(31960311)	+	GA-rich	Low_complexity	1	274	(0)	2308513
19	0.0	0.0	0.0	chr20	32497057	32497077	(31947090)	+	(A)n	Simple_repeat	1	21	(0)	2308547
187	33.3	1.4	1.4	chr20	32538119	32538191	(31905976)	C	MIR3	SINE/MIR	(19)	189	117	2308614
58	1.8	0.0	0.0	chr20	32538446	32538502	(31905665)	+	(CCTC)n	Simple_repeat	1	57	(0)	2308615
518	32.1	12.4	0.0	chr20	32561649	32561838	(31882329)	+	MIRb	SINE/MIR	5	221	(47)	2308680
494	28.8	3.4	1.2	chr20	32580116	32580323	(31863844)	+	MIR	SINE/MIR	50	265	(3)	2308728
564	27.7	3.6	1.1	chr20	32580416	32580605	(31863562)	C	Charlie22a	DNA/hAT-Charlie	(292)	199	5	2308729
817	18.8	11.9	0.5	chr20	32666949	32667141	(31777026)	C	MER33	DNA/hAT-Charlie	(104)	220	3	2308957
277	27.8	17.8	2.2	chr20	32667142	32667318	(31776849)	C	L2	LINE/L2	(431)	2988	2778	2308964
12	16.5	0.0	0.0	chr20	32667436	32667462	(31776705)	+	(GGCA)n	Simple_repeat	1	27	(0)	2308965
521	20.7	3.9	20.5	chr20	33401624	33401937	(31042230)	+	MER33	DNA/hAT-Charlie	14	267	(57)	2310618
542	25.6	9.8	0.0	chr20	33466054	33466236	(30977931)	+	L1ME3Cz	LINE/L1	333	516	(481)	2310809
457	25.6	21.3	2.5	chr20	33473182	33473385	(30970782)	+	L2a	LINE/L2	3079	3331	(95)	2310834
1079	11.5	0.0	2.4	chr20	33473386	33473550	(30970617)	C	AluJr	SINE/Alu	(7)	305	145	2310835
22	3.9	0.0	0.0	chr20	33521821	33521847	(30922320)	+	(TG)n	Simple_repeat	1	27	(0)	2310974
704	27.1	7.0	1.8	chr20	33685523	33685740	(30758427)	+	MIR	SINE/MIR	33	262	(0)	2311336
2400	8.4	0.7	0.0	chr20	34546410	34546707	(29897460)	+	AluSp	SINE/Alu	1	300	(13)	2313305
467	32.9	0.6	2.3	chr20	34546708	34546884	(29897283)	C	MLT1J	LTR/ERVL-MaLR	(220)	292	119	2313306
200	24.7	8.3	0.0	chr20	34546968	34547044	(29897123)	C	L2	LINE/L2	(1714)	1705	1622	2313303
14	13.6	0.0	5.6	chr20	34677094	34677129	(29767038)	+	G-rich	Low_complexity	1	36	(0)	2313590
645	28.9	9.7	7.2	chr20	34781371	34781702	(29662465)	C	MER102b	DNA/hAT-Charlie	(0)	341	1	2313809
235	28.2	0.2	0.0	chr20	34956053	34956125	(29488042)	C	MIRc	SINE/MIR	(130)	138	62	2314221
439	23.9	11.5	1.2	chr20	36378200	36378367	(28065800)	+	MIR	SINE/MIR	61	260	(2)	2317471
232	17.4	0.0	4.2	chr20	36378404	36378451	(28065716)	+	L2a	LINE/L2	3369	3414	(12)	2317472
28	18.4	0.9	9.7	chr20	37345991	37346102	(27098065)	+	(TCC)n	Simple_repeat	1	113	(0)	2319802
12	13.0	11.9	0.0	chr20	37346084	37346125	(27098042)	+	(CTCTCT)n	Simple_repeat	1	47	(0)	2319803
17	34.2	2.4	0.0	chr20	37346169	37346252	(27097915)	+	(CCGT)n	Simple_repeat	1	86	(0)	2319804
23	7.9	7.5	0.0	chr20	37408351	37408393	(27035774)	+	(GT)n	Simple_repeat	1	46	(0)	2319966
36	19.6	0.0	0.0	chr20	37408536	37408602	(27035565)	+	(CA)n	Simple_repeat	1	67	(0)	2319967
15	26.7	0.0	2.0	chr20	37408674	37408724	(27035443)	+	(AGAC)n	Simple_repeat	1	51	(0)	2319968
11	27.0	6.8	0.0	chr20	37409126	37409184	(27034983)	+	(GTGTCT)n	Simple_repeat	1	63	(0)	2319969
22	0.0	0.0	0.0	chr20	37412621	37412644	(27031523)	+	(TG)n	Simple_repeat	1	24	(0)	2319981
18	0.0	0.0	0.0	chr20	37412644	37412663	(27031504)	+	(GA)n	Simple_repeat	1	20	(0)	2319982
42	0.0	0.0	0.0	chr20	37412671	37412706	(27031461)	+	(TG)n	Simple_repeat	1	36	(0)	2319983
19	0.0	0.0	0.0	chr20	37412831	37412851	(27031316)	+	(TG)n	Simple_repeat	1	21	(0)	2319984
461	28.4	3.1	7.2	chr20	37880546	37880712	(26563455)	C	MIRb	SINE/MIR	(23)	245	86	2320947
289	23.5	6.1	5.2	chr20	38883680	38883795	(25560372)	+	L2b	LINE/L2	3268	3363	(24)	2323078
14	21.8	0.0	0.0	chr20	38894261	38894297	(25549870)	+	(CGCCCA)n	Simple_repeat	1	37	(0)	2323104
187	38.6	2.1	9.2	chr20	38894344	38894605	(25549562)	+	L2	LINE/L2	2650	2892	(527)	2323105
492	33.1	4.2	0.6	chr20	41135175	41135356	(23308811)	+	MIRb	SINE/MIR	40	228	(40)	2327094
304	31.7	8.0	10.3	chr20	41340247	41340489	(23103678)	C	L2b	LINE/L2	(18)	3357	3121	2327403
14	14.8	0.0	3.1	chr20	41341062	41341093	(23103074)	+	(TCCT)n	Simple_repeat	1	32	(0)	2327405
255	26.6	15.6	0.0	chr20	44039032	44039247	(20404920)	C	L2a	LINE/L2	(1)	3374	3104	2332524
367	22.4	9.8	14.1	chr20	44683802	44684014	(19760153)	C	MIRb	SINE/MIR	(0)	268	66	2334075
595	33.6	4.4	2.0	chr20	44747166	44747411	(19696756)	+	MIRb	SINE/MIR	17	268	(0)	2334248
607	25.7	4.1	9.8	chr20	46333698	46333934	(18110233)	+	MIRb	SINE/MIR	39	256	(6)	2337475
239	20.0	1.8	1.8	chr20	46681283	46681338	(17762829)	+	L2b	LINE/L2	3320	3375	(0)	2338206
26	31.8	2.8	4.0	chr20	46681350	46681385	(17762782)	+	G-rich	Low_complexity	1	147	(0)	2338207
25	19.9	5.6	5.3	chr20	46681386	46681492	(17762675)	+	GA-rich	Low_complexity	1	113	(0)	2338208
2315	14.5	5.5	2.0	chr20	46681628	46682040	(17762127)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	2338209
1914	14.0	4.5	5.2	chr20	46932905	46933111	(17511056)	+	THE1D	LTR/ERVL-MaLR	183	381	(0)	2338803
322	32.7	9.2	6.6	chr20	46933112	46933277	(17510890)	+	MIRb	SINE/MIR	104	260	(8)	2338802
1339	24.7	8.6	0.2	chr20	46933348	46933823	(17510344)	C	LTR75B	LTR/ERVL	(18)	590	25	2338805
423	29.9	6.2	0.7	chr20	46995911	46996048	(17448119)	C	MIRb	SINE/MIR	(104)	164	19	2338959
1324	19.1	11.9	3.9	chr20	47230673	47231027	(17213140)	C	L1MB8	LINE/L1	(10)	6168	5782	2339536
1025	27.8	9.4	1.6	chr20	48912350	48912799	(15531368)	+	LTR16C	LTR/ERVL	1	489	(0)	2343190
397	29.9	4.5	9.3	chr20	49982121	49982378	(14461789)	+	L2b	LINE/L2	3130	3374	(1)	2345773
2387	8.7	0.0	0.0	chr20	50068946	50069233	(14374934)	C	AluSx1	SINE/Alu	(24)	288	1	2346013
628	29.3	17.7	0.0	chr20	50069268	50069601	(14374566)	+	L2a	LINE/L2	3021	3426	(0)	2346014
257	29.4	15.1	1.2	chr20	50071597	50071761	(14372406)	C	MIRb	SINE/MIR	(0)	268	77	2346022
376	32.9	13.7	1.7	chr20	50369839	50370185	(14073982)	+	L2a	LINE/L2	3022	3416	(10)	2346744
19	19.2	5.5	1.7	chr20	50731396	50731450	(13712717)	+	(GC)n	Simple_repeat	1	58	(0)	2347595
224	32.5	1.7	0.8	chr20	51767263	51767380	(12676787)	C	MER5A	DNA/hAT-Charlie	(8)	181	63	2349862
271	23.3	0.0	0.0	chr20	53217348	53217407	(11226760)	C	MIRc	SINE/MIR	(97)	171	112	2353020
18	3.7	3.6	0.0	chr20	53737223	53737250	(10706917)	+	(AAAC)n	Simple_repeat	1	29	(0)	2354221
506	24.6	2.3	1.6	chr20	53919080	53919207	(10524960)	C	MLT1J	LTR/ERVL-MaLR	(288)	224	96	2354668
2148	9.8	2.7	1.0	chr20	53919280	53919574	(10524593)	+	AluSx	SINE/Alu	2	301	(11)	2354669
242	32.6	10.7	2.1	chr20	56750343	56750436	(7693731)	+	MIRb	SINE/MIR	3	105	(163)	2359772
19	3.9	0.0	0.0	chr20	56750760	56750786	(7693381)	+	(GGAGG)n	Simple_repeat	1	27	(0)	2359773
438	13.3	4.8	7.7	chr20	57258523	57258652	(7185515)	C	L1MD3	LINE/L1	(0)	7995	7870	2360856
296	36.4	7.1	0.0	chr20	57280271	57280388	(7163779)	+	L2b	LINE/L2	3249	3375	(0)	2360899
589	21.2	5.2	0.0	chr20	57654219	57654364	(6789803)	C	L1MA10	LINE/L1	(3)	6331	6178	2361545
232	33.7	4.0	2.2	chr20	57986818	57987001	(6457166)	+	MIRc	SINE/MIR	4	196	(72)	2362183
2160	22.8	8.2	2.9	chr20	57987497	57988083	(6456084)	C	Tigger9b	DNA/TcMar-Tigger	(3)	621	1	2362186
183	18.2	0.0	0.0	chr20	58604828	58604860	(5839307)	+	MIR3	SINE/MIR	109	141	(67)	2363226
1040	17.3	3.0	0.0	chr20	59675617	59675813	(4768354)	+	MER20	DNA/hAT-Charlie	17	219	(0)	2364852
308	22.0	9.1	0.0	chr20	59783687	59783786	(4660381)	C	L2b	LINE/L2	(25)	3350	3241	2365037
1210	21.7	11.6	0.0	chr20	59783973	59784286	(4659881)	+	MLT2C1	LTR/ERVL	2	356	(41)	2365038
456	32.0	2.0	1.3	chr20	59988125	59988276	(4455891)	C	MIR	SINE/MIR	(97)	165	13	2365303
357	25.0	10.5	2.3	chr20	59988321	59988451	(4455716)	C	MER5A1	DNA/hAT-Charlie	(23)	143	1	2365304
496	26.2	0.3	0.2	chr20	61217658	61218828	(3225339)	+	(TAGGTG)n	Simple_repeat	1	1175	(0)	2367092
15	22.6	0.0	2.3	chr20	62553372	62553415	(1890752)	+	G-rich	Low_complexity	1	44	(0)	2368693
355	24.7	4.2	1.4	chr20	62587154	62587329	(1856838)	C	LTR16E1	LTR/ERVL	(1)	537	306	2368728
12	16.4	5.9	0.0	chr20	62638706	62638739	(1805428)	+	GA-rich	Low_complexity	1	36	(0)	2368783
441	24.2	9.3	4.1	chr20	62640599	62640770	(1803397)	+	MER113	DNA/hAT-Charlie	231	412	(109)	2368786
255	38.4	0.9	0.9	chr20	62640827	62640939	(1803228)	C	L3	LINE/CR1	(48)	4051	3939	2368787
2726	25.1	4.7	2.3	chr20	62780090	62780652	(1663515)	+	MER67C	LTR/ERV1	141	711	(0)	2368936
183	22.2	5.3	1.8	chr20	62980012	62980066	(1464101)	+	LFSINE_Vert	SINE/tRNA	192	248	(211)	2369150
29	29.9	0.8	2.5	chr20	63254482	63254600	(1189567)	+	(CCCCGC)n	Simple_repeat	1	120	(0)	2369425
14	5.0	0.0	0.0	chr20	63304000	63304020	(1140147)	+	(CCTC)n	Simple_repeat	1	21	(0)	2369471
12	10.0	0.0	0.0	chr20	63304040	63304061	(1140106)	+	(CCTC)n	Simple_repeat	1	22	(0)	2369471
16	32.3	0.0	0.0	chr20	63304160	63304220	(1139947)	+	(CCTC)n	Simple_repeat	1	61	(0)	2369472
14	5.0	0.0	0.0	chr20	63304240	63304260	(1139907)	+	(CCTC)n	Simple_repeat	1	21	(0)	2369472
14	5.0	0.0	0.0	chr20	63304280	63304300	(1139867)	+	(CCTC)n	Simple_repeat	1	21	(0)	2369472
1521	30.1	5.5	2.1	chr20	63434467	63435083	(1009084)	C	L1MB5	LINE/L1	(36)	6138	5500	2369568
1732	17.4	4.6	0.0	chr20	63435120	63435407	(1008760)	+	AluJb	SINE/Alu	1	302	(10)	2369569
12	23.1	3.7	3.6	chr20	63642358	63642411	(801756)	+	(CCTCCCG)n	Simple_repeat	1	56	(0)	2369821
1152	26.8	7.0	4.4	chr20	63837910	63838335	(605832)	+	L1MD3	LINE/L1	6941	7619	(376)	2370109
2241	11.3	0.0	2.8	chr20	63838336	63838653	(605514)	C	AluSx1	SINE/Alu	(1)	311	3	2370110
319	22.7	1.1	2.2	chr20	63894739	63894828	(549339)	+	MamRep488	DNA/hAT-Tip100	57	145	(74)	2370195
16	23.2	0.0	2.1	chr21	14216054	14216115	(32493868)	+	(CCCCGC)n	Simple_repeat	1	60	(0)	2377523
6972	23.0	4.5	0.4	chr21	24308172	24309754	(22400229)	C	MSTB1-int	LTR/ERVL-MaLR	(0)	1651	1	2390953
13	21.5	3.4	8.7	chr21	26170896	26170984	(20538999)	+	(GGCCCAC)n	Simple_repeat	1	92	(0)	2393605
24	15.8	1.7	3.3	chr21	28885363	28885422	(17824561)	+	(CATGCG)n	Simple_repeat	1	61	(0)	2397390
21	19.3	0.0	0.0	chr21	33025855	33025901	(13684082)	+	(CCCCGC)n	Simple_repeat	1	47	(0)	2404180
13	7.2	6.5	3.0	chr21	33033230	33033260	(13676723)	+	(GCGG)n	Simple_repeat	1	33	(0)	2404187
434	21.7	5.0	0.0	chr21	33171181	33171295	(13538688)	+	LTR16E1	LTR/ERVL	415	535	(3)	2404433
1614	12.2	14.8	0.4	chr21	33325596	33326018	(13383965)	C	LTR34	LTR/ERV1	(13)	686	2	2404728
2087	11.8	2.3	2.6	chr21	36428377	36428680	(10281303)	C	AluSx	SINE/Alu	(9)	303	1	2409863
434	26.1	12.7	5.8	chr21	36428681	36428919	(10281064)	C	L2b	LINE/L2	(248)	3178	2924	2409861
261	33.0	11.2	3.0	chr21	36428945	36429141	(10280842)	C	L2b	LINE/L2	(599)	2820	2606	2409861
19	9.4	0.0	2.8	chr21	37267194	37267233	(9442750)	+	(CCCACC)n	Simple_repeat	1	38	(0)	2411267
13	22.7	2.4	0.0	chr21	37915413	37915453	(8794530)	+	(CCTCT)n	Simple_repeat	1	42	(0)	2412287
18	9.7	3.0	0.0	chr21	39183299	39183331	(7526652)	+	(CCT)n	Simple_repeat	1	34	(0)	2414124
15	23.2	4.8	1.5	chr21	39183481	39183542	(7526441)	+	(CCCACCG)n	Simple_repeat	1	65	(0)	2414125
52	23.9	5.7	2.9	chr21	40846684	40846911	(5863072)	+	(CCGCGCG)n	Simple_repeat	1	241	(0)	2416615
12	9.1	4.2	0.0	chr21	40847061	40847084	(5862899)	+	(CAGG)n	Simple_repeat	1	25	(0)	2416616
30	4.3	1.9	5.5	chr21	44906130	44906183	(1803800)	+	(TCCC)n	Simple_repeat	1	55	(0)	2422301
896	16.9	0.0	0.0	chr21	44906185	44906314	(1803669)	C	AluSx3	SINE/Alu	(2)	309	180	2422302
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
20	22.7	0.0	3.3	chr21	44940122	44940181	(1769802)	+	(CCGGCC)n	Simple_repeat	1	60	(0)	2422350
12	13.9	0.0	8.1	chr22	19122076	19122112	(31696356)	+	(CCCCG)n	Simple_repeat	1	37	(0)	2431479
279	30.5	4.8	0.0	chr22	19168220	19168337	(31650131)	C	LTR16A1	LTR/ERVL	(313)	143	20	2431566
13	18.3	2.6	2.5	chr22	19431815	19431853	(31386615)	+	G-rich	Low_complexity	1	40	(0)	2431997
312	30.1	6.7	3.2	chr22	20017199	20017356	(30801112)	C	MIRb	SINE/MIR	(17)	251	88	2432796
439	31.7	0.0	10.7	chr22	20244027	20244231	(30574237)	+	MamTip2	DNA/hAT-Tip100	113	295	(10)	2433038
12	21.6	0.0	0.0	chr22	21032459	21032490	(29785978)	+	(CCTGCG)n	Simple_repeat	1	32	(0)	2434421
15	29.6	0.0	1.8	chr22	21630062	21630117	(29188351)	+	(GCCCAG)n	Simple_repeat	1	56	(0)	2435564
2596	5.9	0.0	0.0	chr22	21630283	21630588	(29187880)	+	AluSg	SINE/Alu	2	307	(3)	2435565
293	35.0	11.2	5.9	chr22	21666391	21666528	(29151940)	+	L2	LINE/L2	1672	1813	(1606)	2435647
2420	6.9	0.7	1.0	chr22	21666529	21666833	(29151635)	+	AluSx1	SINE/Alu	1	304	(8)	2435648
330	29.5	8.1	6.8	chr22	23034865	23035016	(27783452)	C	MIRb	SINE/MIR	(99)	169	17	2437689
12	17.2	8.3	1.9	chr22	23167439	23167486	(27650982)	+	(CCTG)n	Simple_repeat	1	52	(0)	2437858
12	28.7	0.0	2.1	chr22	23167676	23167707	(27650761)	+	(TTCA)n	Simple_repeat	1	32	(0)	2437859
20	6.8	0.0	0.0	chr22	23398769	23398799	(27419669)	+	(TGGGC)n	Simple_repeat	1	31	(0)	2438234
180	24.2	7.5	1.6	chr22	23398987	23399049	(27419419)	+	MIR1_Amn	SINE/MIR	71	137	(93)	2438235
18	20.3	3.3	3.2	chr22	23750983	23751042	(27067426)	+	G-rich	Low_complexity	1	62	(0)	2438891
15	19.3	0.0	4.4	chr22	23751116	23751160	(27067308)	+	(GCCCCCG)n	Simple_repeat	1	45	(0)	2438892
20	20.2	0.0	2.3	chr22	25111218	25111260	(25707208)	+	(AC)n	Simple_repeat	1	43	(0)	2441503
193	27.0	8.6	0.0	chr22	25405680	25405753	(25412715)	C	MIR1_Amn	SINE/MIR	(85)	145	65	2442127
32	10.0	1.8	1.8	chr22	25420825	25420904	(25397564)	+	(AGG)n	Simple_repeat	1	80	(0)	2442160
378	20.5	7.4	8.5	chr22	26330765	26330929	(24487539)	C	MER113B	DNA/hAT-Charlie	(94)	208	46	2444090
547	23.9	1.2	6.3	chr22	26331325	26331498	(24486970)	C	L1ME4b	LINE/L1	(4)	888	724	2444091
13	18.4	2.1	6.1	chr22	26648392	26648441	(24170027)	+	G-rich	Low_complexity	1	47	(0)	2444850
528	30.7	10.2	2.8	chr22	27560931	27561248	(23257220)	C	L2	LINE/L2	(337)	3082	2739	2446973
1519	22.9	12.0	4.0	chr22	27561509	27562013	(23256455)	+	MLT2B1	LTR/ERVL	61	601	(0)	2446974
311	20.1	10.4	7.1	chr22	28009686	28009824	(22808644)	+	L2a	LINE/L2	3240	3426	(0)	2447858
19	18.5	2.0	1.9	chr22	28800537	28800587	(22017881)	+	(CGCGC)n	Simple_repeat	1	52	(0)	2449229
331	29.0	12.3	7.8	chr22	29072428	29072601	(21745867)	C	MIR	SINE/MIR	(58)	204	10	2449833
28	17.9	5.5	2.0	chr22	29072948	29073031	(21745437)	+	G-rich	Low_complexity	1	86	(0)	2449835
2412	8.3	0.7	0.0	chr22	29107219	29107518	(21710950)	C	AluSq4	SINE/Alu	(8)	303	2	2449896
14	30.8	0.0	0.0	chr22	29268282	29268333	(21550135)	+	G-rich	Low_complexity	1	52	(0)	2450246
16	22.0	0.0	3.9	chr22	29388334	29388384	(21430084)	+	(TGACCCC)n	Simple_repeat	1	51	(0)	2450443
232	22.4	2.4	5.2	chr22	29470074	29470159	(21348309)	C	MIR3	SINE/MIR	(57)	151	77	2450637
287	24.8	10.6	0.0	chr22	29581240	29581340	(21237128)	+	MIR3	SINE/MIR	43	155	(53)	2450910
2520	5.2	0.0	0.0	chr22	29581355	29581661	(21236807)	C	AluY	SINE/Alu	(4)	307	1	2450911
19	16.7	4.3	0.0	chr22	29720592	29720638	(21097830)	+	G-rich	Low_complexity	1	49	(0)	2451175
19	28.9	2.6	1.3	chr22	30326886	30326962	(20491506)	+	(GCC)n	Simple_repeat	1	79	(0)	2452371
241	28.6	6.2	3.7	chr22	31080579	31080687	(19737781)	+	MIR3	SINE/MIR	74	185	(23)	2453985
14	16.4	2.9	0.0	chr22	31212128	31212161	(19606307)	+	(GCCAGA)n	Simple_repeat	1	35	(0)	2454271
13	21.7	3.4	4.9	chr22	31212162	31212220	(19606248)	+	G-rich	Low_complexity	1	61	(0)	2454272
13	28.4	3.6	0.0	chr22	31345605	31345660	(19472808)	+	(CCCCCT)n	Simple_repeat	1	58	(0)	2454546
17	20.2	4.8	4.6	chr22	31346017	31346078	(19472390)	+	(CG)n	Simple_repeat	1	65	(0)	2454547
3206	25.1	6.8	5.5	chr22	32203087	32206587	(18611881)	C	REP522	Satellite/telo	(94)	3546	1	2456556
13	26.0	1.7	4.9	chr22	32474941	32475000	(18343468)	+	(GCC)n	Simple_repeat	1	61	(0)	2457054
305	21.1	13.6	0.0	chr22	35172591	35172685	(15645783)	C	MER5B	DNA/hAT-Charlie	(2)	176	67	2462411
184	29.1	14.0	7.1	chr22	35299491	35299616	(15518852)	+	MIR3	SINE/MIR	5	140	(68)	2462659
15	11.2	0.0	3.2	chr22	35489382	35489412	(15329056)	+	(CCCT)n	Simple_repeat	1	31	(0)	2463130
248	29.3	8.9	2.4	chr22	35492379	35492504	(15325964)	+	L2c	LINE/L2	3016	3150	(225)	2463134
244	34.5	2.0	11.9	chr22	35522958	35523125	(15295343)	C	L2c	LINE/L2	(23)	3364	3214	2463211
248	24.1	0.0	0.0	chr22	35523146	35523199	(15295269)	C	L5	LINE/RTE-X	(517)	1748	1695	2463209
497	27.1	2.8	0.7	chr22	36498337	36498477	(14319991)	C	MER58B	DNA/hAT-Charlie	(3)	338	195	2465194
841	8.5	0.0	4.2	chr22	36498695	36498812	(14319656)	C	AluSz6	SINE/Alu	(1)	311	199	2465195
1147	23.9	6.7	8.7	chr22	37297865	37298087	(13520381)	C	L2a	LINE/L2	(2)	3424	3191	2466925
209	34.9	18.5	0.0	chr22	37434857	37434962	(13383506)	+	L2b	LINE/L2	3241	3370	(5)	2467223
203	32.4	15.5	0.0	chr22	37607019	37607154	(13211314)	C	MIR3	SINE/MIR	(16)	192	32	2467647
13	16.1	0.0	0.0	chr22	37639434	37639461	(13179007)	+	G-rich	Low_complexity	1	28	(0)	2467706
12	21.6	0.0	0.0	chr22	37639593	37639624	(13178844)	+	G-rich	Low_complexity	1	32	(0)	2467707
28	6.8	0.0	5.8	chr22	38336245	38336296	(12482172)	+	(CCCGC)n	Simple_repeat	1	52	(0)	2469301
61	5.1	2.3	2.3	chr22	39243211	39243296	(11575172)	+	(TC)n	Simple_repeat	1	88	(0)	2471185
979	15.8	18.1	0.3	chr22	39533082	39533367	(11285101)	+	Charlie1	DNA/hAT-Charlie	2393	2740	(41)	2471834
364	26.0	0.9	0.9	chr22	39997904	39998008	(10820460)	C	MIRc	SINE/MIR	(75)	193	89	2472686
403	24.5	4.1	6.7	chr22	39998304	39998452	(10820016)	C	MIRb	SINE/MIR	(46)	222	78	2472687
12	12.6	0.0	3.6	chr22	40370878	40370905	(10447563)	+	G-rich	Low_complexity	1	28	(0)	2473431
25	17.7	0.0	3.3	chr22	40951150	40951210	(9867258)	+	(GCCCC)n	Simple_repeat	1	61	(0)	2474735
272	22.7	12.1	1.1	chr22	41021480	41021600	(9796868)	C	MIRc	SINE/MIR	(111)	157	22	2474931
13	10.5	6.5	0.0	chr22	41021799	41021829	(9796639)	+	G-rich	Low_complexity	1	33	(0)	2474932
185	23.5	3.8	5.6	chr22	41021974	41022027	(9796441)	+	MamRTE1	LINE/RTE-BovB	778	830	(2982)	2474933
350	28.3	0.0	3.8	chr22	42365876	42365996	(8452472)	C	MIRc	SINE/MIR	(71)	159	50	2477893
672	28.9	1.4	1.6	chr22	42365989	42366204	(8452264)	C	MIRb	SINE/MIR	(31)	231	19	2477894
362	26.6	11.0	4.9	chr22	42369558	42369719	(8448749)	+	L2b	LINE/L2	3199	3371	(4)	2477900
277	25.9	8.6	0.0	chr22	42369756	42369840	(8448628)	C	MIR	SINE/MIR	(74)	188	96	2477901
621	29.9	3.1	1.6	chr22	42399948	42400137	(8418331)	C	MIRb	SINE/MIR	(37)	231	39	2477971
187	18.4	0.0	2.6	chr22	42437452	42437490	(8380978)	C	L2c	LINE/L2	(16)	3371	3334	2478051
253	33.6	3.2	0.0	chr22	42437607	42437728	(8380740)	+	Tigger16a	DNA/TcMar-Tigger	102	227	(730)	2478052
190	31.1	5.3	1.1	chr22	42717236	42717326	(8101142)	C	MIRb	SINE/MIR	(132)	136	42	2478759
184	34.0	4.1	2.1	chr22	43143535	43143630	(7674838)	+	L2a	LINE/L2	3327	3424	(2)	2479694
2292	7.1	0.4	0.4	chr22	44354842	44355122	(6463346)	C	AluSx3	SINE/Alu	(30)	281	1	2481824
471	33.1	13.3	1.6	chr22	44355373	44355676	(6462792)	+	L2a	LINE/L2	2937	3281	(145)	2481825
219	28.8	10.1	1.2	chr22	49917810	49917890	(900578)	C	MER5A	DNA/hAT-Charlie	(0)	189	101	2489961
13	12.3	0.0	9.3	chr22	49918445	49918487	(899981)	+	G-rich	Low_complexity	1	43	(0)	2489962
7724	8.4	1.9	0.1	chr22	50240982	50241969	(576499)	+	LTR13	LTR/ERVK	2	1007	(0)	2490365
339	21.5	3.7	1.2	chr22	50563184	50563263	(255205)	+	L2b	LINE/L2	3290	3371	(4)	2490876
37	0.0	2.5	2.4	chr22	50675374	50675413	(143055)	+	(TG)n	Simple_repeat	1	41	(0)	2491077
1596	26.9	2.8	3.6	chr3	1786969	1787443	(196508116)	C	MLT1D	LTR/ERVL-MaLR	(34)	471	1	2494889
372	30.0	2.8	1.4	chr3	1787447	1787588	(196507971)	C	L3	LINE/CR1	(202)	3897	3754	2494887
13	0.0	4.3	4.2	chr3	4467162	4467184	(193828375)	+	(CAG)n	Simple_repeat	1	24	(0)	2499047
346	20.9	3.2	4.2	chr3	4467481	4467575	(193827984)	C	MIR	SINE/MIR	(0)	262	169	2499048
30	17.1	3.0	0.0	chr3	5122066	5122131	(193173428)	+	(AATG)n	Simple_repeat	1	68	(0)	2500268
2591	19.8	5.2	0.8	chr3	6378159	6378687	(191916872)	+	LTR9B	LTR/ERV1	7	560	(84)	2502173
21	0.0	0.0	0.0	chr3	6378688	6378710	(191916849)	+	(A)n	Simple_repeat	1	23	(0)	2502174
403	27.3	9.6	0.0	chr3	9914951	9915100	(188380459)	+	MER91A	DNA/hAT-Tip100	20	185	(11)	2508245
24	16.8	4.3	2.7	chr3	9947192	9947261	(188348298)	+	(GCCAGCC)n	Simple_repeat	1	73	(0)	2508320
2420	6.9	0.7	0.3	chr3	9986936	9987241	(188308318)	+	AluY	SINE/Alu	3	309	(2)	2508419
22	10.5	2.3	2.2	chr3	10463996	10464044	(187831515)	+	(CAGACCC)n	Simple_repeat	1	49	(0)	2509462
567	24.2	10.8	1.6	chr3	10510231	10510415	(187785144)	C	MIR	SINE/MIR	(6)	256	53	2509563
17	23.0	2.1	0.0	chr3	11236594	11236640	(187058919)	+	(GAAT)n	Simple_repeat	1	48	(0)	2511067
18	18.4	2.7	0.0	chr3	11236700	11236736	(187058823)	+	(TA)n	Simple_repeat	1	38	(0)	2511068
777	25.7	9.2	0.8	chr3	12987459	12987940	(185307619)	+	L1ME3B	LINE/L1	4971	5502	(740)	2514419
188	31.8	6.4	1.1	chr3	13023472	13023560	(185271999)	C	MIR1_Amn	SINE/MIR	(23)	207	114	2514498
220	27.4	12.1	1.9	chr3	13023527	13023630	(185271929)	C	MIRc	SINE/MIR	(121)	147	32	2514499
218	31.5	8.4	0.0	chr3	13092508	13092639	(185202920)	C	L2a	LINE/L2	(128)	3247	3096	2514628
752	22.1	4.2	0.6	chr3	13885714	13885895	(184409664)	+	MIR	SINE/MIR	52	240	(22)	2516094
527	29.9	5.8	0.0	chr3	14267583	14267793	(184027766)	C	L1ME3	LINE/L1	(166)	5996	5773	2516568
708	28.2	5.3	1.8	chr3	14401886	14402105	(183893454)	C	MIR	SINE/MIR	(1)	261	34	2516882
14	7.2	0.0	8.6	chr3	14402533	14402567	(183892992)	+	(CCCGG)n	Simple_repeat	1	35	(0)	2516883
23	29.8	2.1	2.0	chr3	15859410	15859506	(182436053)	+	(CGC)n	Simple_repeat	1	99	(0)	2519512
18	6.4	2.7	5.3	chr3	17742520	17742559	(180553000)	+	(TCC)n	Simple_repeat	1	38	(0)	2522304
249	35.0	6.8	2.1	chr3	29410155	29410294	(168885265)	C	MamGypsy2-LTR	LTR/Gypsy	(35)	148	2	2539131
41	9.3	0.0	0.0	chr3	31980806	31980863	(166314696)	+	(CA)n	Simple_repeat	1	58	(0)	2542974
13	17.6	5.0	0.0	chr3	31980864	31980894	(166314665)	+	(CGCG)n	Simple_repeat	1	33	(0)	2542975
15	19.5	6.4	0.0	chr3	32468102	32468148	(165827411)	+	(GTT)n	Simple_repeat	1	50	(0)	2543935
2354	6.7	1.0	1.0	chr3	32468152	32468448	(165827111)	C	AluSx1	SINE/Alu	(15)	297	1	2543936
13	12.5	0.0	0.0	chr3	32570224	32570249	(165725310)	+	(GGCGG)n	Simple_repeat	1	26	(0)	2544138
16	11.2	0.0	0.0	chr3	32570308	32570336	(165725223)	+	(GGGGC)n	Simple_repeat	1	29	(0)	2544139
13	14.8	0.0	3.1	chr3	32570874	32570905	(165724654)	+	G-rich	Low_complexity	1	32	(0)	2544141
12	19.9	0.0	0.0	chr3	33798625	33798653	(164496906)	+	(CAGC)n	Simple_repeat	1	29	(0)	2546482
382	27.2	1.7	4.2	chr3	35778289	35778407	(162517152)	+	LTR33A_	LTR/ERVL	76	191	(340)	2549096
287	27.9	8.2	5.9	chr3	35778432	35778633	(162516926)	+	LTR33A_	LTR/ERVL	241	447	(68)	2549096
13	20.4	6.7	5.0	chr3	38136871	38136945	(160158614)	+	(GCGGCC)n	Simple_repeat	1	80	(0)	2552566
184	7.2	0.0	3.5	chr3	38165413	38165441	(160130118)	+	L2b	LINE/L2	2962	2989	(386)	2552611
14	14.4	5.0	2.4	chr3	39383110	39383149	(158912410)	+	(TTAA)n	Simple_repeat	1	42	(0)	2554427
13	20.1	0.0	2.8	chr3	40387135	40387170	(157908389)	+	(CCGCC)n	Simple_repeat	1	36	(0)	2555866
950	7.1	2.3	0.8	chr3	40476865	40476991	(157818568)	+	AluJo	SINE/Alu	1	129	(183)	2556065
13	30.4	0.0	1.7	chr3	40476999	40477020	(157818539)	+	A-rich	Low_complexity	36	57	(0)	2556066
11	15.3	2.4	7.0	chr3	42502630	42502671	(155792888)	+	(CAGCGC)n	Simple_repeat	1	43	(0)	2559219
213	29.0	10.4	2.1	chr3	42652217	42652357	(155643202)	+	L2c	LINE/L2	2977	3130	(257)	2559441
231	17.0	8.6	0.0	chr3	43106512	43106564	(155188995)	C	HAL1ME	LINE/L1	(185)	2280	2223	2560144
13	4.5	0.0	7.4	chr3	43286331	43286357	(155009202)	+	(TCC)n	Simple_repeat	1	27	(0)	2560422
16	12.7	0.0	5.3	chr3	43286463	43286500	(155009059)	+	(CGCCC)n	Simple_repeat	1	38	(0)	2560423
2423	6.8	1.7	0.0	chr3	43690061	43690354	(154605205)	C	AluSp	SINE/Alu	(14)	299	1	2560994
29	13.9	0.0	3.4	chr3	47475821	47475879	(150819680)	+	(GCG)n	Simple_repeat	1	59	(0)	2567225
13	18.8	0.0	5.0	chr3	47475977	47476016	(150819543)	+	(CGCCCTG)n	Simple_repeat	1	40	(0)	2567226
18	16.2	1.9	5.5	chr3	47476084	47476137	(150819422)	+	(GGCCG)n	Simple_repeat	1	55	(0)	2567227
1462	12.8	2.2	1.3	chr3	47476182	47476407	(150819152)	+	AluJo	SINE/Alu	2	229	(83)	2567228
251	25.8	21.5	0.8	chr3	48430134	48430258	(149865301)	+	MIRb	SINE/MIR	22	179	(89)	2569301
221	32.2	10.6	2.8	chr3	48439822	48440003	(149855556)	+	L2	LINE/L2	2883	3080	(339)	2569308
227	22.2	0.0	0.2	chr3	48556237	48556282	(149739277)	C	MIRc	SINE/MIR	(145)	123	76	2569561
13	8.5	0.0	3.7	chr3	48685810	48685836	(149609723)	+	(GGCAG)n	Simple_repeat	1	27	(0)	2569696
17	26.6	5.3	3.0	chr3	48685860	48685954	(149609605)	+	(CGCCG)n	Simple_repeat	1	100	(0)	2569697
2178	6.6	5.4	2.1	chr3	48987602	48987887	(149307672)	+	AluY	SINE/Alu	1	296	(15)	2570440
2443	8.4	0.0	0.0	chr3	48988188	48988483	(149307076)	+	AluSg	SINE/Alu	1	296	(14)	2570441
11	28.5	4.9	3.5	chr3	49340061	49340142	(148955417)	+	(CGCGCCG)n	Simple_repeat	1	86	(0)	2571124
295	12.1	26.7	0.0	chr3	49412753	49412818	(148882741)	+	5S	rRNA	1	90	(31)	2571303
926	33.9	2.9	0.5	chr3	50519360	50519736	(147775823)	C	MLT1I	LTR/ERVL-MaLR	(1)	410	25	2573144
8613	2.2	1.1	0.0	chr3	50519892	50520848	(147774711)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	2573145
183	25.5	3.8	0.0	chr3	50569634	50569684	(147725875)	C	MIR1_Amn	SINE/MIR	(64)	166	114	2573214
27	22.5	0.0	0.0	chr3	50617072	50617128	(147678431)	+	G-rich	Low_complexity	1	57	(0)	2573289
291	21.1	14.8	4.6	chr3	51538360	51538468	(146757091)	C	MIRb	SINE/MIR	(45)	223	102	2574562
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
419	36.4	8.7	0.7	chr3	52001394	52001452	(146294107)	+	L3	LINE/CR1	4032	4095	(4)	2575287
445	35.3	10.1	5.1	chr3	52026119	52026551	(146269008)	+	L2c	LINE/L2	2922	3378	(9)	2575336
2150	13.9	0.3	0.0	chr3	52026552	52026853	(146268706)	+	AluSx	SINE/Alu	2	304	(8)	2575337
56	0.0	0.0	0.0	chr3	52026854	52026901	(146268658)	+	(AT)n	Simple_repeat	1	48	(0)	2575338
13	18.4	7.0	0.0	chr3	52897677	52897719	(145397840)	+	G-rich	Low_complexity	1	46	(0)	2576620
347	21.5	0.0	0.0	chr3	52897905	52897969	(145397590)	C	MER5A	DNA/hAT-Charlie	(59)	130	66	2576621
15	17.1	2.4	2.4	chr3	53494202	53494242	(144801317)	+	(GGAGCC)n	Simple_repeat	1	42	(0)	2577717
13	14.5	3.2	0.0	chr3	58008464	58008494	(140287065)	+	(CCCGCT)n	Simple_repeat	1	32	(0)	2585183
353	28.0	5.7	4.1	chr3	58203223	58203469	(140092090)	+	L2c	LINE/L2	2942	3412	(14)	2585550
2239	9.9	1.0	0.0	chr3	58305743	58306036	(139989523)	+	AluSz	SINE/Alu	4	300	(12)	2585762
18	13.3	0.0	0.0	chr3	58306041	58306073	(139989486)	+	(TGAA)n	Simple_repeat	1	33	(0)	2585763
67	0.0	0.0	0.0	chr3	61249934	61249990	(137045569)	+	(AC)n	Simple_repeat	1	57	(0)	2590232
15	6.9	0.0	8.3	chr3	61561751	61561786	(136733773)	+	(CTCCC)n	Simple_repeat	1	36	(0)	2590828
15	22.1	1.7	5.1	chr3	61561850	61561907	(136733652)	+	(CGCCG)n	Simple_repeat	1	59	(0)	2590829
16	0.0	0.0	0.0	chr3	64030658	64030675	(134264884)	+	(A)n	Simple_repeat	1	18	(0)	2595048
311	31.0	1.6	3.0	chr3	64489669	64489875	(133805684)	+	MIR	SINE/MIR	35	242	(26)	2595830
14	0.0	0.0	0.0	chr3	69084996	69085013	(129210546)	+	(GCC)n	Simple_repeat	1	18	(0)	2603423
53	0.0	0.0	0.0	chr3	69687191	69687235	(128608324)	+	(TG)n	Simple_repeat	1	45	(0)	2604618
16	4.5	0.0	0.0	chr3	69687465	69687487	(128608072)	+	(AGGA)n	Simple_repeat	1	23	(0)	2604619
395	27.8	2.8	9.4	chr3	75015333	75015462	(123280097)	+	MIRb	SINE/MIR	32	163	(105)	2613612
1545	22.2	4.0	0.0	chr3	75015463	75015795	(123279764)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	2	2613613
4790	12.5	4.9	2.8	chr3	75220997	75221778	(123073781)	C	LTR1A1	LTR/ERV1	(0)	799	1	2613873
17	8.3	0.0	0.0	chr3	78726892	78726917	(119568642)	+	(AAC)n	Simple_repeat	1	26	(0)	2618528
18	9.8	3.0	0.0	chr3	87227477	87227509	(111068050)	+	(GGGCC)n	Simple_repeat	1	34	(0)	2629279
14	14.2	0.0	5.7	chr3	88058632	88058666	(110236893)	+	(GGC)n	Simple_repeat	1	35	(0)	2630310
886	15.1	1.4	1.4	chr3	94062637	94062782	(104232777)	C	AluJr	SINE/Alu	(15)	297	152	2633773
13	8.9	0.0	3.9	chr3	98593139	98593164	(99702395)	+	(CTC)n	Simple_repeat	1	26	(0)	2639139
306	32.5	15.2	7.0	chr3	98732872	98733255	(99562304)	C	L1M4b	LINE/L1	(6205)	662	242	2639384
366	26.8	4.4	7.8	chr3	111862799	111862964	(86432595)	C	MIR3	SINE/MIR	(1)	207	48	2657069
303	14.5	3.1	1.6	chr3	112991545	112991607	(85303952)	C	MER47C	DNA/TcMar-Tigger	(33)	64	1	2658551
18	17.7	0.0	0.0	chr3	113696645	113696676	(84598883)	+	(C)n	Simple_repeat	1	32	(0)	2659588
12	24.4	3.2	4.6	chr3	115784294	115784356	(82511203)	+	G-rich	Low_complexity	1	65	(0)	2662585
23	28.4	2.0	3.0	chr3	115784357	115784388	(82511171)	+	(GCGG)n	Simple_repeat	5	101	(0)	2662586
1002	18.7	3.2	0.6	chr3	123101193	123101375	(75194184)	C	MER5A	DNA/hAT-Charlie	(1)	188	1	2673152
1833	12.7	9.5	1.0	chr3	124116586	124116894	(74178665)	C	MER44A	DNA/TcMar-Tigger	(1)	338	1	2674805
16	8.7	8.1	0.0	chr3	124117125	124117161	(74178398)	+	(GGAAGAT)n	Simple_repeat	1	40	(0)	2674806
257	27.0	20.3	2.1	chr3	124118821	124119009	(74176550)	C	MIRc	SINE/MIR	(31)	237	6	2674809
14	10.7	0.0	5.9	chr3	125212721	125212754	(73082805)	+	(CCCCG)n	Simple_repeat	1	34	(0)	2676637
15	22.6	2.9	5.6	chr3	125916098	125916166	(72379393)	+	(GCCCTG)n	Simple_repeat	1	71	(0)	2677883
470	27.9	10.1	9.3	chr3	127089671	127090045	(71205514)	C	L2c	LINE/L2	(32)	3343	2966	2679491
266	29.0	5.2	3.3	chr3	127159045	127159194	(71136365)	+	MIR	SINE/MIR	23	175	(87)	2679606
344	24.7	10.4	2.0	chr3	127452222	127452374	(70843185)	C	MIRc	SINE/MIR	(5)	203	34	2680064
1002	25.3	3.1	1.9	chr3	127699412	127699669	(70595890)	C	MIR	SINE/MIR	(0)	262	2	2680521
13	15.2	2.5	4.9	chr3	127783643	127783682	(70511877)	+	(CCTTTT)n	Simple_repeat	1	41	(0)	2680660
2015	25.2	12.1	2.5	chr3	127886704	127887434	(70408125)	+	LTR8B	LTR/ERV1	1	811	(9)	2680858
558	14.3	2.3	0.0	chr3	127887549	127887632	(70407927)	+	AluSx3	SINE/Alu	206	291	(20)	2680859
2523	18.1	4.5	2.5	chr3	127887633	127888185	(70407374)	C	MLT2B2	LTR/ERVL	(12)	705	1	2680860
15	14.7	0.0	0.0	chr3	128994259	128994288	(69301271)	+	(TTCA)n	Simple_repeat	1	30	(0)	2682836
15	13.3	3.0	0.0	chr3	129567456	129567488	(68728071)	+	(GGCTCA)n	Simple_repeat	1	34	(0)	2683994
38	8.0	0.0	0.0	chr3	129605267	129605319	(68690240)	+	(CCG)n	Simple_repeat	1	53	(0)	2684060
11	22.4	1.9	5.7	chr3	134406797	134406848	(63888711)	+	(CAGGCTG)n	Simple_repeat	1	53	(0)	2691410
432	33.9	4.9	0.0	chr3	138593851	138594045	(59701514)	C	MIRb	SINE/MIR	(34)	234	30	2697756
12	17.1	2.9	2.8	chr3	138608976	138609010	(59686549)	+	(CGCC)n	Simple_repeat	1	36	(0)	2697787
13	22.5	2.3	2.3	chr3	138609063	138609105	(59686454)	+	(GCG)n	Simple_repeat	1	44	(0)	2697788
42	4.3	0.0	0.0	chr3	138916148	138916195	(59379364)	+	(CAGCCCA)n	Simple_repeat	1	48	(0)	2698511
581	27.9	7.3	6.6	chr3	140941197	140941468	(57354091)	C	L1ME3G	LINE/L1	(291)	633	360	2701539
489	31.9	10.6	4.4	chr3	141084829	141085241	(57210318)	C	L2c	LINE/L2	(1)	3386	2945	2701751
14	0.0	0.0	0.0	chr3	141875533	141875565	(56419994)	+	(AAC)n	Simple_repeat	1	33	(0)	2703065
12	26.6	2.0	1.9	chr3	142224839	142224889	(56070670)	+	A-rich	Low_complexity	1	52	(0)	2703767
12	31.9	3.2	0.0	chr3	142596364	142596425	(55699134)	+	G-rich	Low_complexity	1	64	(0)	2704384
19	15.0	0.0	0.0	chr3	142724476	142724512	(55571047)	+	G-rich	Low_complexity	1	37	(0)	2704608
17	3.2	2.5	9.8	chr3	142724600	142724639	(55570920)	+	(CCT)n	Simple_repeat	1	41	(0)	2704609
3026	17.5	6.9	1.6	chr3	142866707	142867333	(55428226)	+	LTR9C	LTR/ERV1	4	666	(0)	2704817
185	26.2	9.7	3.7	chr3	149752626	149752732	(48542827)	C	L2a	LINE/L2	(6)	3420	3307	2714160
526	26.4	9.2	0.6	chr3	149752742	149752920	(48542639)	C	MIR	SINE/MIR	(3)	259	64	2714161
249	33.1	6.3	3.3	chr3	150239064	150239216	(48056343)	C	L2b	LINE/L2	(167)	3208	3051	2714924
417	25.0	17.6	0.0	chr3	150247914	150248053	(48047506)	+	MIR	SINE/MIR	35	204	(58)	2714940
12	23.3	0.0	0.0	chr3	152842688	152842722	(45452837)	+	G-rich	Low_complexity	1	35	(0)	2718727
14	14.1	0.0	3.0	chr3	155870486	155870520	(42425039)	+	G-rich	Low_complexity	1	33	(0)	2723194
14	28.2	0.0	4.6	chr3	155870798	155870862	(42424697)	+	(CCGTC)n	Simple_repeat	1	65	(0)	2723195
12	17.5	3.1	0.0	chr3	155870839	155870870	(42424689)	+	(CCGGCC)n	Simple_repeat	1	33	(0)	2723196
15	26.4	0.0	0.0	chr3	158098206	158098250	(40197309)	+	G-rich	Low_complexity	1	45	(0)	2726357
18	16.0	6.1	0.0	chr3	158107040	158107088	(40188471)	+	(CCCGCAT)n	Simple_repeat	1	52	(0)	2726365
22	16.8	1.8	3.5	chr3	160755496	160755552	(37540007)	+	G-rich	Low_complexity	1	58	(0)	2730311
47	0.0	0.0	0.0	chr3	160808384	160808423	(37487136)	+	(TG)n	Simple_repeat	1	40	(0)	2730391
12411	15.3	1.7	2.5	chr3	160885420	160887573	(37407986)	+	L1PA7	LINE/L1	3	2151	(4332)	2730519
12	19.6	2.9	0.0	chr3	161104922	161104956	(37190603)	+	(GCGGCC)n	Simple_repeat	1	36	(0)	2730834
26	0.0	0.0	0.0	chr3	170038081	170038105	(28257454)	+	(GCGGG)n	Simple_repeat	1	25	(0)	2742256
15	4.2	4.0	0.0	chr3	172318276	172318300	(25977259)	+	(CAGGC)n	Simple_repeat	1	26	(0)	2745911
438	34.0	1.3	1.9	chr3	174023695	174023850	(24271709)	+	MamRTE1	LINE/RTE-BovB	3512	3666	(146)	2748382
1912	14.2	7.1	0.3	chr3	175274034	175274372	(23021187)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2750139
21	12.2	2.0	4.0	chr3	180912587	180912635	(17382924)	+	(CCCCTCC)n	Simple_repeat	1	50	(0)	2758546
2064	11.7	1.2	5.9	chr3	181271450	181271805	(17023754)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	2759096
865	18.2	26.1	5.7	chr3	183115869	183116225	(15179334)	C	MER51E	LTR/ERV1	(25)	615	42	2762118
307	21.1	6.6	3.8	chr3	183697314	183697485	(14598074)	+	MIR	SINE/MIR	6	175	(55)	2763195
30	25.7	2.0	1.9	chr3	183697708	183697772	(14597787)	+	(CCCCG)n	Simple_repeat	1	98	(0)	2763196
16	3.5	9.7	2.9	chr3	183697773	183697803	(14597756)	+	(CG)n	Simple_repeat	1	34	(0)	2763197
226	30.0	7.0	0.0	chr3	184250189	184250268	(14045291)	+	MIRc	SINE/MIR	46	131	(137)	2764294
1800	23.1	4.8	2.3	chr3	184541323	184541805	(13753754)	C	ERV3-16A3_I-int	LTR/ERVL	(1197)	4029	3534	2764862
19	25.1	2.2	5.5	chr3	186567280	186567368	(11728191)	+	(CGC)n	Simple_repeat	1	91	(0)	2768577
279	28.6	14.2	9.2	chr3	192833889	192834115	(5461444)	+	L2c	LINE/L2	3148	3387	(0)	2778534
1202	14.1	0.0	1.1	chr3	192834171	192834347	(5461212)	+	AluSx3	SINE/Alu	136	310	(1)	2778535
35	0.0	0.0	0.0	chr3	193041329	193041358	(5254201)	+	(AC)n	Simple_repeat	1	30	(0)	2778896
618	23.3	8.6	1.1	chr3	193041379	193041560	(5253999)	C	MIRc	SINE/MIR	(17)	251	55	2778897
19	0.0	0.0	0.0	chr3	193241119	193241142	(5054417)	+	(GGCG)n	Simple_repeat	1	24	(0)	2779170
15	23.3	2.0	3.9	chr3	193904354	193904420	(4391139)	+	GA-rich	Low_complexity	1	65	(0)	2780204
13	20.0	5.0	0.0	chr3	197297909	197297948	(997611)	+	(GCGGA)n	Simple_repeat	1	42	(0)	2786665
2482	6.7	0.3	0.0	chr3	197595130	197595427	(700132)	+	AluSx3	SINE/Alu	1	299	(12)	2787190
735	20.0	1.3	6.1	chr3	197595428	197595531	(700028)	C	MER5B	DNA/hAT-Charlie	(56)	122	19	2787189
282	30.9	2.8	3.5	chr4	473488	473631	(189740924)	+	MER57E3	LTR/ERV1	296	438	(49)	2789143
34	27.9	4.7	2.2	chr4	674000	674169	(189540386)	+	G-rich	Low_complexity	1	178	(0)	2789392
41	21.5	2.5	6.2	chr4	1009776	1009933	(189204622)	+	(GCCCC)n	Simple_repeat	1	162	(0)	2789781
14	25.5	6.2	0.0	chr4	1346620	1346684	(188867871)	+	(GGCGCGG)n	Simple_repeat	1	69	(0)	2790134
518	30.0	6.2	0.0	chr4	1615637	1615816	(188598739)	C	Tigger17c	DNA/TcMar-Tigger	(996)	192	1	2790364
17	23.3	0.0	2.4	chr4	3765559	3765613	(186448942)	+	(CG)n	Simple_repeat	1	53	(0)	2793579
360	33.6	3.9	0.0	chr4	4866539	4866660	(185347895)	C	MIRb	SINE/MIR	(121)	147	21	2795618
20	3.1	6.1	0.0	chr4	6200656	6200689	(184013866)	+	(GCCCCC)n	Simple_repeat	1	36	(0)	2797929
1889	12.9	1.9	0.0	chr4	6640054	6640356	(183574199)	C	AluSz	SINE/Alu	(1)	311	3	2798791
297	31.1	0.0	1.0	chr4	6731051	6731154	(183483401)	+	L3	LINE/CR1	3941	4043	(56)	2798961
523	24.3	4.0	4.0	chr4	7073491	7073666	(183140889)	C	MLT1J	LTR/ERVL-MaLR	(32)	480	305	2799549
590	19.2	8.5	1.9	chr4	7073736	7073889	(183140666)	C	MLT1J	LTR/ERVL-MaLR	(335)	177	13	2799549
14	19.9	0.0	4.5	chr4	7529930	7529973	(182684582)	+	G-rich	Low_complexity	1	44	(0)	2800274
826	14.9	0.0	0.0	chr4	7987305	7987418	(182227137)	C	AluJr	SINE/Alu	(194)	118	5	2801047
12	23.1	3.7	3.6	chr4	10461415	10461468	(179753087)	+	(TGCGC)n	Simple_repeat	1	56	(0)	2804463
364	26.3	13.6	0.0	chr4	11343677	11343790	(178870765)	+	MIRc	SINE/MIR	10	141	(127)	2806059
32	0.0	0.0	0.0	chr4	11429644	11429673	(178784882)	+	(T)n	Simple_repeat	1	30	(0)	2806191
867	31.2	9.6	4.4	chr4	21780064	21780696	(168433859)	+	HAL1	LINE/L1	3	671	(1836)	2823040
229	36.1	8.3	2.4	chr4	25312423	25312547	(164902008)	C	MamRTE1	LINE/RTE-BovB	(124)	3688	3556	2828691
36	30.6	1.8	3.5	chr4	30721980	30722149	(159492406)	+	(CGG)n	Simple_repeat	1	173	(0)	2837094
12	19.9	0.0	0.0	chr4	40056774	40056802	(150157753)	+	(CCCG)n	Simple_repeat	1	29	(0)	2851169
20	25.4	1.6	1.6	chr4	41216400	41216413	(148998142)	+	(GCG)n	Simple_repeat	1	31	(33)	2853654
25	11.8	0.0	0.0	chr4	41216414	41216450	(148998105)	+	(G)n	Simple_repeat	1	37	(0)	2853655
20	25.4	1.6	1.6	chr4	41216451	41216462	(148998093)	+	(GCG)n	Simple_repeat	32	64	(0)	2853654
227	18.8	13.3	1.2	chr4	42636674	42636759	(147577796)	+	MLT1K	LTR/ERVL-MaLR	1	98	(497)	2855889
17	17.9	4.5	0.0	chr4	44446769	44446812	(145767743)	+	(CCCT)n	Simple_repeat	1	46	(0)	2858299
13	16.3	0.0	5.3	chr4	47032599	47032636	(143181919)	+	(CACCCG)n	Simple_repeat	1	38	(0)	2861648
415	21.0	17.3	1.4	chr4	47085639	47085783	(143128772)	C	MLT1H2	LTR/ERVL-MaLR	(8)	481	309	2861720
392	20.4	26.6	2.6	chr4	47085868	47086017	(143128538)	C	MLT1H2	LTR/ERVL-MaLR	(307)	242	57	2861720
15	14.7	0.0	0.0	chr4	48017002	48017031	(142197524)	+	(TCAT)n	Simple_repeat	1	30	(0)	2863148
18	7.0	0.0	5.9	chr4	55636097	55636130	(134578425)	+	(GCA)n	Simple_repeat	1	34	(0)	2871241
4868	13.0	0.8	5.3	chr4	55849836	55850666	(134363889)	C	LTR1A2	LTR/ERV1	(1)	836	44	2871568
284	31.6	13.6	0.7	chr4	56387675	56387827	(133826728)	+	MIRc	SINE/MIR	32	207	(61)	2872524
12	10.9	0.0	8.6	chr4	56821734	56821768	(133392787)	+	G-rich	Low_complexity	1	35	(0)	2873371
2155	24.0	5.1	2.0	chr4	61251021	61251572	(128962983)	C	MLT1G	LTR/ERVL-MaLR	(3)	588	19	2879172
16	0.0	0.0	0.0	chr4	61336859	61336875	(128877680)	+	(T)n	Simple_repeat	1	17	(0)	2879274
644	29.2	9.2	3.1	chr4	61452015	61452437	(128762118)	+	LTR16	LTR/ERVL	1	451	(5)	2879438
754	25.3	3.1	0.0	chr4	61984426	61984583	(128229972)	+	AluJr4	SINE/Alu	137	299	(13)	2880198
520	12.0	4.4	5.4	chr4	61984686	61984777	(128229778)	C	FLAM_A	SINE/Alu	(18)	124	34	2880199
17	18.2	0.0	0.0	chr4	65414170	65414200	(124800355)	+	GA-rich	Low_complexity	1	31	(0)	2884338
884	29.1	10.1	3.0	chr4	66585631	66585999	(123628556)	+	LTR16	LTR/ERVL	41	438	(0)	2885784
20	16.3	0.0	5.6	chr4	77075643	77075696	(113138859)	+	G-rich	Low_complexity	1	54	(0)	2900312
18	12.6	0.0	0.0	chr4	77075885	77075911	(113138644)	+	(A)n	Simple_repeat	1	27	(0)	2900313
21	17.5	3.6	1.8	chr4	77075912	77075937	(113138618)	+	A-rich	Low_complexity	3	57	(0)	2900314
609	21.6	8.5	3.0	chr4	77156265	77156464	(113058091)	C	L1MC5a	LINE/L1	(2)	2775	2564	2900479
12	29.0	1.9	1.9	chr4	77820281	77820333	(112394222)	+	(GGCGG)n	Simple_repeat	1	54	(0)	2901226
34	7.5	0.0	0.0	chr4	78058104	78058146	(112156409)	+	(GT)n	Simple_repeat	1	43	(0)	2901639
15	32.9	0.0	0.0	chr4	79211506	79211554	(111003001)	+	(TA)n	Simple_repeat	1	49	(0)	2903329
15	22.8	1.8	3.6	chr4	82044169	82044223	(108170332)	+	G-rich	Low_complexity	1	56	(0)	2907008
300	21.4	14.3	0.0	chr4	83034764	83034847	(107179708)	+	MER5C	DNA/hAT-Charlie	216	313	(0)	2908719
302	30.3	0.9	0.9	chr4	83110465	83110574	(107103981)	+	L2a	LINE/L2	3295	3404	(22)	2908872
961	24.5	8.0	14.1	chr4	83390660	83391009	(106823546)	+	MER67B	LTR/ERV1	339	661	(0)	2909434
269	30.5	8.4	2.8	chr4	83391048	83391226	(106823329)	+	MamSINE1	SINE/tRNA-RTE	11	200	(90)	2909436
13	11.2	6.7	0.0	chr4	83536858	83536887	(106677668)	+	(GTGC)n	Simple_repeat	1	32	(0)	2909729
20	15.1	2.7	0.0	chr4	84495569	84495605	(105718950)	+	(TG)n	Simple_repeat	1	38	(0)	2911179
13	12.2	7.9	2.4	chr4	84583041	84583078	(105631477)	+	(TCC)n	Simple_repeat	1	41	(0)	2911314
13	12.2	3.7	0.0	chr4	86935280	86935306	(103279249)	+	(CCG)n	Simple_repeat	1	28	(0)	2914647
23	31.3	5.2	0.7	chr4	88379171	88379305	(101835250)	+	G-rich	Low_complexity	1	142	(0)	2917064
2555	18.3	0.9	5.4	chr4	89140142	89140713	(101073842)	C	Ricksha_c	DNA/MULE-MuDR	(1142)	906	361	2918185
549	31.6	3.3	2.1	chr4	89152859	89153076	(101061479)	C	MIRb	SINE/MIR	(28)	240	19	2918203
600	29.8	10.1	2.9	chr4	89680647	89681260	(100533295)	C	L1MEd	LINE/L1	(185)	2027	1360	2918972
2837	11.3	3.0	0.5	chr4	89681261	89681677	(100532878)	+	MER61C	LTR/ERV1	1	428	(0)	2918974
249	28.8	14.0	0.0	chr4	98142820	98142930	(92071625)	+	MIRc	SINE/MIR	61	189	(79)	2929713
11787	15.2	2.0	0.5	chr4	99534727	99536665	(90677890)	C	L1PA10	LINE/L1	(4001)	2352	385	2931799
22	18.5	5.8	1.4	chr4	100837315	100837383	(89377172)	+	(TCCACA)n	Simple_repeat	1	73	(0)	2933575
13	14.7	0.0	3.1	chr4	103019725	103019756	(87194799)	+	G-rich	Low_complexity	1	32	(0)	2936488
18	29.9	0.0	1.6	chr4	104494731	104494793	(85719762)	+	GA-rich	Low_complexity	1	63	(0)	2938271
34	4.0	7.7	0.0	chr4	104494918	104494969	(85719586)	+	(TC)n	Simple_repeat	1	56	(0)	2938272
13	13.0	0.0	7.7	chr4	104495055	104495093	(85719462)	+	G-rich	Low_complexity	1	39	(0)	2938273
11	16.4	5.9	0.0	chr4	109560059	109560092	(80654463)	+	(GCTCTC)n	Simple_repeat	1	36	(0)	2945187
16	0.0	0.0	0.0	chr4	109560093	109560110	(80654445)	+	(T)n	Simple_repeat	1	18	(0)	2945188
18	20.1	0.0	5.3	chr4	109703447	109703455	(80511100)	+	(GGCCCC)n	Simple_repeat	1	27	(30)	2945395
12	18.1	2.4	4.8	chr4	109703456	109703496	(80511059)	+	(GCCCC)n	Simple_repeat	1	42	(0)	2945396
18	20.1	0.0	5.3	chr4	109703497	109703503	(80511052)	+	(GGCCCC)n	Simple_repeat	28	57	(0)	2945395
593	25.8	8.2	2.2	chr4	113078564	113078745	(77135810)	C	MIR	SINE/MIR	(56)	206	13	2950366
351	20.6	12.1	12.8	chr4	113761739	113761855	(76452700)	+	L1MDb	LINE/L1	597	712	(5697)	2951248
1623	21.5	8.5	8.3	chr4	117511364	117511795	(72702760)	C	MER67D	LTR/ERV1	(81)	433	1	2955788
8853	7.9	14.5	1.0	chr4	118265368	118266730	(71947825)	+	LTR12C	LTR/ERV1	3	1579	(0)	2956638
19	20.8	0.0	0.0	chr4	118888870	118888913	(71325642)	+	(GGC)n	Simple_repeat	1	44	(0)	2957660
2168	3.9	0.0	8.1	chr4	119301143	119301425	(70913130)	+	AluSx1	SINE/Alu	22	281	(31)	2958230
1013	26.2	11.0	2.7	chr4	120749062	120749462	(69465093)	+	L1MCc	LINE/L1	32	469	(5954)	2960176
386	34.6	9.0	9.0	chr4	120749467	120749879	(69464676)	+	L1MCc	LINE/L1	420	832	(5591)	2960176
404	15.6	4.2	3.2	chr4	123304532	123304624	(66909931)	C	UCON68	Unknown	(34)	98	5	2963758
1455	19.5	5.6	4.0	chr4	123406900	123407196	(66807359)	C	AluJo	SINE/Alu	(10)	302	1	2963917
29	21.5	6.1	5.1	chr4	128061433	128061580	(62152975)	+	(CGGCG)n	Simple_repeat	1	157	(0)	2970077
609	36.1	5.8	8.0	chr4	138161377	138161800	(52052755)	+	L2b	LINE/L2	2961	3374	(1)	2982540
18	4.2	0.0	0.0	chr4	138242309	138242333	(51972222)	+	(CTG)n	Simple_repeat	1	25	(0)	2982633
32	22.3	0.0	1.2	chr4	139084411	139084490	(51130065)	+	(CGGCGG)n	Simple_repeat	1	80	(0)	2983898
818	19.8	18.6	2.2	chr4	139568338	139568606	(50645949)	C	Tigger16a	DNA/TcMar-Tigger	(0)	957	635	2984869
13	15.8	6.8	2.1	chr4	139734990	139735033	(50479522)	+	(GCCCGC)n	Simple_repeat	1	47	(0)	2985181
598	17.7	7.8	0.0	chr4	139834491	139834620	(50379935)	C	MER5A1	DNA/hAT-Charlie	(0)	166	26	2985316
12	7.9	7.4	0.0	chr4	140151677	140151703	(50062852)	+	G-rich	Low_complexity	1	29	(0)	2985798
12	23.4	0.0	4.5	chr4	140151741	140151784	(50062771)	+	A-rich	Low_complexity	1	44	(0)	2985799
12	13.7	6.2	0.0	chr4	140154048	140154079	(50060476)	+	(CGCTGC)n	Simple_repeat	1	34	(0)	2985803
16	0.0	0.0	0.0	chr4	140154108	140154127	(50060428)	+	(CGC)n	Simple_repeat	1	20	(0)	2985804
34	2.4	2.3	2.2	chr4	140154128	140154171	(50060384)	+	(CCT)n	Simple_repeat	1	45	(0)	2985805
18	15.0	2.1	4.1	chr4	140154307	140154354	(50060201)	+	(CGCCCGG)n	Simple_repeat	1	49	(0)	2985806
14	26.9	1.7	3.4	chr4	140297523	140297580	(49916975)	+	(TCCC)n	Simple_repeat	1	59	(0)	2986041
7559	12.3	1.9	1.6	chr4	140594910	140595050	(49619505)	C	L1PA15-16	LINE/L1	(4980)	1873	1731	2986452
1323	24.6	2.6	2.8	chr4	140595044	140595530	(49619025)	C	L1PA15-16	LINE/L1	(5248)	1605	1265	2986452
30	12.4	1.9	0.0	chr4	140756367	140756419	(49458136)	+	(GGA)n	Simple_repeat	1	54	(0)	2986715
1792	20.0	1.4	2.2	chr4	143502020	143502387	(46712168)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	2990400
1301	27.8	5.6	1.9	chr4	143502388	143502746	(46711809)	+	MER89	LTR/ERV1	186	558	(1)	2990399
12	20.7	4.3	2.1	chr4	143559112	143559157	(46655398)	+	(AGCTGCC)n	Simple_repeat	1	48	(0)	2990468
17	12.5	0.0	0.0	chr4	146472429	146472454	(43742101)	+	(T)n	Simple_repeat	1	26	(0)	2994396
11	16.7	5.9	0.0	chr4	148442943	148442976	(41771579)	+	(CTCCAG)n	Simple_repeat	1	36	(0)	2997125
12	19.5	0.0	8.3	chr4	151015367	151015414	(39199141)	+	G-rich	Low_complexity	1	48	(0)	3000636
13	26.6	3.7	0.0	chr4	151409571	151409624	(38804931)	+	G-rich	Low_complexity	1	56	(0)	3001454
13	11.1	0.0	6.1	chr4	152936129	152936161	(37278394)	+	(GGTGGC)n	Simple_repeat	1	33	(0)	3003771
14	12.2	0.0	0.0	chr4	152936269	152936295	(37278260)	+	(CCGCC)n	Simple_repeat	1	27	(0)	3003772
474	25.4	6.8	8.1	chr4	152991523	152991745	(37222810)	+	L1ME3A	LINE/L1	5942	6161	(12)	3003846
215	24.7	10.1	2.2	chr4	153018604	153018694	(37195861)	C	L2a	LINE/L2	(1)	3425	3327	3003895
2328	8.3	0.3	0.3	chr4	163167011	163167299	(27047256)	+	AluSg	SINE/Alu	1	289	(21)	3017677
411	32.5	3.0	0.6	chr4	165053148	165053308	(25161247)	C	L2	LINE/L2	(774)	2645	2481	3020401
13	20.2	2.0	5.8	chr4	168832071	168832121	(21382434)	+	(CCCGCT)n	Simple_repeat	1	52	(0)	3025411
277	23.4	7.8	0.0	chr4	169619639	169619732	(20594823)	+	LTR102_Mam	LTR/ERVL	367	468	(383)	3026580
192	28.1	14.3	2.0	chr4	169619734	169619831	(20594724)	+	L2c	LINE/L2	3275	3386	(1)	3026581
300	32.3	8.3	0.0	chr4	182882048	182882202	(7332353)	C	MamSINE1	SINE/tRNA-RTE	(114)	176	8	3044036
23	23.3	1.7	0.0	chr4	183099190	183099258	(7115297)	+	GA-rich	Low_complexity	1	70	(0)	3044388
220	29.6	7.5	0.0	chr4	184734489	184734586	(5479969)	+	MIR3	SINE/MIR	46	151	(57)	3047090
222	22.9	11.4	0.0	chr4	184769693	184769762	(5444793)	+	L2b	LINE/L2	3297	3375	(0)	3047135
13	22.7	4.3	0.0	chr4	185396634	185396679	(4817876)	+	(GGCCCCC)n	Simple_repeat	1	48	(0)	3048207
754	22.8	9.7	0.0	chr4	185470602	185470816	(4743739)	+	MIR	SINE/MIR	3	240	(22)	3048337
58	25.9	1.8	8.2	chr4	185471081	185471415	(4743140)	+	G-rich	Low_complexity	1	341	(0)	3048338
13	10.4	6.1	2.9	chr4	185471708	185471740	(4742815)	+	(CCG)n	Simple_repeat	1	35	(0)	3048339
23	26.0	2.2	3.2	chr5	784750	784841	(180753418)	+	(CCGCC)n	Simple_repeat	1	94	(0)	3055689
13	28.6	2.8	2.7	chr5	1008824	1008894	(180529365)	+	(CTGCGCC)n	Simple_repeat	1	73	(0)	3055895
377	32.5	5.5	5.5	chr5	1157899	1158142	(180380117)	C	L1M5	LINE/L1	(1430)	4716	4469	3055996
18	39.5	0.8	2.4	chr5	1545697	1545822	(179992437)	+	(ACAC)n	Simple_repeat	1	127	(0)	3056344
226	34.5	0.8	1.8	chr5	1844480	1845415	(179692844)	+	(TATATC)n	Simple_repeat	1	943	(0)	3056707
15	13.5	2.2	6.4	chr5	3491373	3491418	(178046841)	+	(GTTTG)n	Simple_repeat	1	47	(0)	3058395
16	9.0	0.0	9.3	chr5	5494718	5494760	(176043499)	+	(CGCCCC)n	Simple_repeat	1	43	(0)	3060618
14	19.9	0.0	9.5	chr5	5494840	5494902	(176043357)	+	(CCCCGC)n	Simple_repeat	1	63	(0)	3060619
14	12.7	0.0	0.0	chr5	5887177	5887202	(175651057)	+	(GGT)n	Simple_repeat	1	26	(0)	3061120
773	28.6	9.2	8.3	chr5	6185954	6186544	(175351715)	+	MLT1F1	LTR/ERVL-MaLR	1	572	(7)	3061492
300	30.1	7.6	3.2	chr5	8157302	8157490	(173380769)	C	L1ME4b	LINE/L1	(0)	892	695	3064011
1060	27.7	6.3	0.3	chr5	10588544	10588869	(170949390)	+	MLT1I	LTR/ERVL-MaLR	60	406	(5)	3067191
2634	13.8	4.5	0.2	chr5	14165119	14165561	(167372698)	C	L1PA16	LINE/L1	(0)	6166	5704	3071885
294	28.6	1.3	0.0	chr5	16855547	16855623	(164682636)	C	Plat_L3	LINE/CR1	(1175)	2411	2334	3075653
12	16.1	3.5	0.0	chr5	17216656	17216684	(164321575)	+	(TCTCC)n	Simple_repeat	1	30	(0)	3076464
722	30.8	2.7	2.7	chr5	20196232	20196488	(161341771)	C	MIR	SINE/MIR	(1)	261	5	3080359
2201	17.4	1.7	1.4	chr5	27472074	27472487	(154065772)	+	MER61C	LTR/ERV1	14	428	(0)	3089960
747	22.1	2.8	7.1	chr5	27472488	27472711	(154065548)	+	MER61-int	LTR/ERV1	2	215	(5002)	3089960
26855	14.1	3.7	2.8	chr5	27472715	27477542	(154060717)	+	MER61-int	LTR/ERV1	343	5213	(4)	3089960
16	23.4	5.5	0.0	chr5	32173873	32173927	(149364332)	+	(GTC)n	Simple_repeat	1	58	(0)	3096322
1337	21.5	4.3	0.7	chr5	35617351	35617638	(145920621)	C	AluSx3	SINE/Alu	(11)	300	2	3101644
801	14.3	4.3	0.0	chr5	36693500	36693632	(144844627)	+	MER5A	DNA/hAT-Charlie	1	139	(50)	3103198
80	0.0	0.0	0.0	chr5	39075285	39075352	(142462907)	+	(AC)n	Simple_repeat	1	68	(0)	3107043
13	20.5	5.8	1.8	chr5	40797717	40797768	(140740491)	+	(CGCCCGC)n	Simple_repeat	1	55	(0)	3109433
11	24.1	2.6	0.0	chr5	43603102	43603140	(137935119)	+	G-rich	Low_complexity	1	40	(0)	3113334
17	0.0	0.0	0.0	chr5	51188402	51188420	(130349839)	+	(GT)n	Simple_repeat	1	19	(0)	3117445
348	29.3	9.6	9.4	chr5	54669905	54670235	(126868024)	C	L4_C_Mam	LINE/RTE-X	(176)	4962	4631	3122100
259	26.9	11.9	0.0	chr5	54670303	54670446	(126867813)	C	LTR88a	LTR/Gypsy?	(0)	862	637	3122101
20	15.1	4.7	4.5	chr5	56815266	56815329	(124722930)	+	(CGCCTC)n	Simple_repeat	1	67	(0)	3125609
17	8.6	5.1	2.4	chr5	59127601	59127639	(122410620)	+	(CCCCACC)n	Simple_repeat	1	41	(0)	3129093
26	5.2	2.4	2.3	chr5	59893360	59893401	(121644858)	+	(GGC)n	Simple_repeat	1	43	(0)	3130137
17	26.5	5.1	1.2	chr5	59893413	59893490	(121644769)	+	G-rich	Low_complexity	1	82	(0)	3130138
13	9.4	8.3	2.6	chr5	64165962	64165997	(117372262)	+	(CGG)n	Simple_repeat	1	39	(0)	3136104
425	29.8	3.4	4.7	chr5	64767933	64768080	(116770179)	C	MIR3	SINE/MIR	(12)	196	51	3136878
274	24.4	24.2	0.0	chr5	69166597	69166715	(112371544)	+	MIRc	SINE/MIR	78	234	(34)	3143406
474	30.1	4.8	0.5	chr5	72172965	72173184	(109365075)	+	MIR	SINE/MIR	3	232	(30)	3148594
12	18.1	0.0	3.0	chr5	74685110	74685142	(106853117)	+	G-rich	Low_complexity	1	33	(0)	3152359
14	17.6	0.0	0.0	chr5	74685356	74685387	(106852872)	+	(GGTGGC)n	Simple_repeat	1	32	(0)	3152360
14	21.1	6.1	0.0	chr5	76716069	76716124	(104822135)	+	(CCGCGC)n	Simple_repeat	1	59	(0)	3155451
11	24.6	0.0	2.5	chr5	76818919	76818958	(104719301)	+	(GCGGAGG)n	Simple_repeat	1	40	(0)	3155688
14	20.1	2.0	4.0	chr5	76818945	76818993	(104719266)	+	G-rich	Low_complexity	1	50	(0)	3155689
13	10.0	0.0	0.0	chr5	78985153	78985174	(102553085)	+	(CAG)n	Simple_repeat	1	22	(0)	3158885
15	17.4	6.7	0.0	chr5	79689801	79689845	(101848414)	+	G-rich	Low_complexity	1	48	(0)	3160220
17	13.3	0.0	0.0	chr5	79689868	79689900	(101848359)	+	(CGGCCC)n	Simple_repeat	1	33	(0)	3160221
25	24.0	4.4	1.1	chr5	79689961	79690050	(101848209)	+	(GGAGGC)n	Simple_repeat	1	94	(0)	3160222
734	30.1	6.7	2.6	chr5	81170185	81170832	(100367427)	+	L2a	LINE/L2	2654	3323	(103)	3162781
19	16.2	1.5	7.6	chr5	83474233	83474297	(98063962)	+	G-rich	Low_complexity	1	66	(0)	3166016
13	13.8	5.5	6.9	chr5	90529555	90529609	(91008650)	+	(TCCGCC)n	Simple_repeat	1	58	(0)	3174918
17	21.0	0.0	5.5	chr5	95284055	95284109	(86254150)	+	GA-rich	Low_complexity	1	55	(0)	3180923
230	22.9	1.4	5.4	chr5	95555504	95555577	(85982682)	C	Charlie9	DNA/hAT-Charlie	(7)	2750	2680	3181311
480	24.3	16.5	9.8	chr5	96091091	96091206	(85447053)	+	MIRb	SINE/MIR	8	121	(147)	3182119
17	30.2	1.2	2.5	chr5	98773973	98774052	(82764207)	+	(GCCCGC)n	Simple_repeat	1	81	(0)	3185542
21	28.1	2.4	1.2	chr5	98774097	98774179	(82764080)	+	(CGCTGC)n	Simple_repeat	1	85	(0)	3185543
13	20.8	7.8	3.6	chr5	102296361	102296437	(79241822)	+	(AGCCTCC)n	Simple_repeat	1	83	(0)	3189947
213	31.4	10.1	0.8	chr5	102756007	102756131	(78782128)	+	MIRc	SINE/MIR	58	195	(73)	3190518
20	25.9	5.6	1.1	chr5	111224137	111224183	(70314076)	+	G-rich	Low_complexity	1	91	(0)	3201161
337	7.0	20.2	0.0	chr5	111463274	111463344	(70074915)	+	L1P	LINE/L1	5283	5371	(780)	3201467
383	16.4	0.0	2.7	chr5	111463345	111463419	(70074840)	+	L1PBa	LINE/L1	368	440	(6422)	3201468
6607	12.5	3.2	0.1	chr5	111463418	111464581	(70073678)	+	L1PBa	LINE/L1	1192	2386	(4477)	3201468
1993	28.9	8.4	6.9	chr5	113423677	113424132	(68114127)	+	HAL1	LINE/L1	314	795	(1712)	3204275
62	0.0	0.0	0.0	chr5	113424133	113424185	(68114074)	+	(AC)n	Simple_repeat	1	53	(0)	3204276
1993	28.9	8.4	6.9	chr5	113424186	113424434	(68113825)	+	HAL1	LINE/L1	796	1047	(1460)	3204275
225	24.7	6.3	11.9	chr5	116442023	116442058	(65096201)	+	MIR3	SINE/MIR	132	159	(49)	3208148
18	4.8	0.0	0.0	chr5	116575153	116575174	(64963085)	+	(A)n	Simple_repeat	1	22	(0)	3208282
54	16.8	0.9	1.9	chr5	120090862	120090967	(61447292)	+	(CT)n	Simple_repeat	1	107	(0)	3213117
1921	12.0	1.0	1.0	chr5	121384255	121384558	(60153701)	C	THE1C	LTR/ERVL-MaLR	(0)	375	72	3214654
575	13.3	0.9	9.5	chr5	121384630	121384745	(60153514)	C	THE1C	LTR/ERVL-MaLR	(269)	106	1	3214654
2448	7.6	0.0	0.7	chr5	122993298	122993599	(58544660)	C	AluY	SINE/Alu	(11)	300	1	3216786
476	29.6	0.0	3.8	chr5	123084021	123084203	(58454056)	+	LFSINE_Vert	SINE/tRNA	4	179	(280)	3216918
28	28.9	1.2	0.0	chr5	124088773	124088853	(57449406)	+	GA-rich	Low_complexity	1	82	(0)	3218194
13	10.8	6.7	0.0	chr5	124570669	124570698	(56967561)	+	GA-rich	Low_complexity	1	32	(0)	3218809
15	18.5	0.0	6.1	chr5	124735404	124735452	(56802807)	+	(GCCCAGG)n	Simple_repeat	1	49	(0)	3219039
14	9.3	5.6	2.6	chr5	126601149	126601184	(54937075)	+	(GGAGCCA)n	Simple_repeat	1	38	(0)	3221499
13	23.2	3.9	1.9	chr5	127073502	127073553	(54464706)	+	(CGCCCCA)n	Simple_repeat	1	54	(0)	3222379
23	17.1	0.0	0.0	chr5	129461452	129461497	(52076762)	+	(CCGCCC)n	Simple_repeat	1	46	(0)	3225348
12	19.8	2.3	4.4	chr5	132011981	132012024	(49526235)	+	(CCCAC)n	Simple_repeat	1	45	(0)	3228814
12	25.8	5.5	0.0	chr5	132370251	132370305	(49167954)	+	(GGAGCT)n	Simple_repeat	1	58	(0)	3229280
535	21.8	12.1	10.1	chr5	132556531	132556749	(48981510)	C	Charlie1	DNA/hAT-Charlie	(2555)	226	3	3229557
16	27.0	2.9	2.8	chr5	133612580	133612649	(47925610)	+	(CCCG)n	Simple_repeat	1	72	(0)	3231171
12	17.2	4.9	2.3	chr5	134226811	134226851	(47311408)	+	(GCCTCGC)n	Simple_repeat	1	43	(0)	3232122
12	18.5	3.6	6.9	chr5	134526881	134526936	(47011323)	+	(CGGCG)n	Simple_repeat	1	58	(0)	3232770
15	15.0	6.5	2.0	chr5	134527187	134527232	(47011027)	+	(TCCC)n	Simple_repeat	1	49	(0)	3232771
18	3.2	5.9	2.8	chr5	135477176	135477209	(46061050)	+	(TCTT)n	Simple_repeat	1	36	(0)	3234344
2013	9.4	0.7	0.7	chr5	138664063	138664348	(42873911)	C	AluSx1	SINE/Alu	(26)	286	1	3239313
350	23.2	18.1	0.0	chr5	138664379	138664473	(42873786)	+	L2a	LINE/L2	3311	3426	(0)	3239314
40	25.9	2.6	3.1	chr5	138753262	138753416	(42784843)	+	G-rich	Low_complexity	1	159	(0)	3239539
283	32.7	12.0	1.0	chr5	139439598	139439804	(42098455)	+	MIRc	SINE/MIR	2	234	(34)	3240769
12	5.5	0.0	0.0	chr5	139639157	139639175	(41899084)	+	(GAG)n	Simple_repeat	1	19	(0)	3241231
605	23.6	16.4	0.0	chr5	139710335	139710512	(41827747)	C	MIRb	SINE/MIR	(30)	238	26	3241349
18	4.7	0.0	0.0	chr5	139710938	139710959	(41827300)	+	(A)n	Simple_repeat	1	22	(0)	3241350
13	26.8	1.6	4.7	chr5	140107984	140108009	(41430250)	+	(CCT)n	Simple_repeat	1	45	(19)	3242040
13	7.6	7.1	0.0	chr5	140108010	140108037	(41430222)	+	(CCCG)n	Simple_repeat	1	30	(0)	3242041
13	26.8	1.6	4.7	chr5	140108038	140108046	(41430213)	+	(CCT)n	Simple_repeat	46	64	(0)	3242040
545	31.4	6.4	0.0	chr5	140691855	140692045	(40846214)	C	MIRb	SINE/MIR	(16)	252	49	3243078
16	19.4	0.0	4.4	chr5	144204752	144204796	(37333463)	+	(TTTA)n	Simple_repeat	1	45	(0)	3248936
21	23.4	0.0	0.0	chr5	147782642	147782692	(33755567)	+	(CAG)n	Simple_repeat	1	51	(0)	3254832
12	16.9	0.0	5.4	chr5	147782757	147782793	(33755466)	+	(CCTCCT)n	Simple_repeat	1	37	(0)	3254833
17	3.7	0.0	6.2	chr5	148826474	148826505	(32711754)	+	(GGAGG)n	Simple_repeat	1	32	(0)	3256513
1142	21.5	0.0	5.8	chr5	149264419	149264709	(32273550)	+	MLT1B	LTR/ERVL-MaLR	9	282	(108)	3257330
619	27.1	7.4	3.8	chr5	149264905	149265218	(32273041)	+	MLT1B	LTR/ERVL-MaLR	269	594	(1)	3257330
245	26.4	18.9	1.2	chr5	149357557	149357717	(32180542)	C	MIRc	SINE/MIR	(27)	241	46	3257560
17	25.0	4.3	5.1	chr5	149358053	149358146	(32180113)	+	(CCG)n	Simple_repeat	1	98	(0)	3257561
13	16.8	7.5	0.0	chr5	149802419	149802458	(31735801)	+	(TCCTC)n	Simple_repeat	1	43	(0)	3258577
338	33.5	5.3	2.4	chr5	149802568	149802732	(31735527)	C	MIRb	SINE/MIR	(8)	260	91	3258578
789	17.8	1.3	0.6	chr5	149802765	149802922	(31735337)	C	MER5A1	DNA/hAT-Charlie	(4)	162	4	3258579
1077	19.5	13.1	0.4	chr5	150350248	150350520	(31187739)	C	MER113A	DNA/hAT-Charlie	(1)	313	1	3259749
275	23.5	15.0	2.9	chr5	150350521	150350592	(31187667)	C	MIR3	SINE/MIR	(48)	160	88	3259748
16	18.4	7.4	4.6	chr5	150357906	150357986	(31180273)	+	(GCGGCCC)n	Simple_repeat	1	87	(0)	3259764
216	31.1	4.3	1.1	chr5	150468204	150468294	(31069965)	+	MIR3	SINE/MIR	92	185	(23)	3260019
658	22.1	4.9	0.0	chr5	151223372	151223525	(30314734)	C	MER5A1	DNA/hAT-Charlie	(0)	166	5	3261429
288	20.3	8.6	3.2	chr5	151223529	151223632	(30314627)	C	MIR3	SINE/MIR	(42)	166	60	3261430
18	17.9	0.0	0.0	chr5	151447684	151447722	(30090537)	+	(AGCCGG)n	Simple_repeat	1	39	(0)	3261885
307	30.3	8.4	3.2	chr5	154501513	154501647	(27036612)	+	MLT1K	LTR/ERVL-MaLR	1	143	(452)	3267279
1261	21.5	13.7	4.4	chr5	154501648	154502055	(27036204)	+	LTR16A1	LTR/ERVL	1	452	(4)	3267280
4360	20.9	3.7	0.1	chr5	156295545	156296410	(25241849)	C	MER54A	LTR/ERVL	(3)	898	1	3270611
29	19.8	2.3	3.4	chr5	157266037	157266122	(24272137)	+	G-rich	Low_complexity	1	88	(0)	3272403
15	27.4	0.0	0.0	chr5	157266218	157266265	(24271994)	+	G-rich	Low_complexity	1	48	(0)	3272404
19	27.9	4.0	1.3	chr5	159209582	159209656	(22328603)	+	(GC)n	Simple_repeat	1	78	(0)	3275707
349	27.9	8.8	0.0	chr5	159987690	159987793	(21550466)	+	Charlie4z	DNA/hAT-Charlie	10	123	(44)	3277131
1209	22.9	12.1	12.3	chr5	160165663	160166166	(21372093)	+	MLT1K	LTR/ERVL-MaLR	4	506	(89)	3277541
2133	10.0	0.0	5.6	chr5	160278151	160278299	(21259960)	C	AluSq2	SINE/Alu	(168)	145	1	3277834
2248	29.6	4.2	2.4	chr5	160381032	160382418	(21155841)	+	ERVL-E-int	LTR/ERVL	2459	3936	(1731)	3278067
855	28.4	0.8	4.0	chr5	160382428	160382676	(21155583)	+	LTR16B2	LTR/ERVL	5	245	(217)	3278068
11	9.9	5.6	5.3	chr5	163437836	163437871	(18100388)	+	(GGTGCG)n	Simple_repeat	1	38	(0)	3282556
29	18.1	2.5	3.7	chr5	168291770	168291849	(13246410)	+	(GGC)n	Simple_repeat	1	82	(0)	3289721
189	30.9	14.6	2.4	chr5	169743118	169743243	(11795016)	C	L3b	LINE/CR1	(92)	5140	4997	3292284
1217	21.6	1.5	0.7	chr5	169813121	169813391	(11724868)	+	MER63D	DNA/hAT-Blackjack	6	278	(783)	3292428
211	31.2	2.1	7.0	chr5	170427108	170427207	(11111052)	+	MIRc	SINE/MIR	97	191	(77)	3293588
499	25.0	8.6	0.0	chr5	170427402	170427529	(11110730)	C	MIR	SINE/MIR	(70)	192	53	3293589
13	23.4	0.0	2.4	chr5	171310491	171310532	(10227727)	+	(ACCCCC)n	Simple_repeat	1	42	(0)	3295009
417	26.7	15.3	10.4	chr5	171335382	171335833	(10202426)	+	MamGypLTR1d	LTR/Gypsy	17	494	(319)	3295054
247	33.8	6.4	3.0	chr5	171439520	171439684	(10098575)	+	MIRc	SINE/MIR	3	173	(95)	3295287
181	31.9	13.2	2.7	chr5	172103329	172103476	(9434783)	C	L3b	LINE/CR1	(130)	5102	4937	3296681
339	29.6	3.4	3.4	chr5	172419360	172419478	(9118781)	+	MLT1K	LTR/ERVL-MaLR	96	214	(328)	3297392
367	25.3	23.5	0.0	chr5	172700928	172701093	(8837166)	+	MamGypLTR1c	LTR/Gypsy	587	803	(0)	3298004
30	6.0	0.0	0.0	chr5	172701141	172701175	(8837084)	+	(AC)n	Simple_repeat	1	35	(0)	3298005
461	30.3	11.9	1.6	chr5	172701196	172701443	(8836816)	+	L2b	LINE/L2	3099	3375	(0)	3298006
2665	2.7	0.0	0.0	chr5	172958945	172959238	(8579021)	+	AluY	SINE/Alu	5	298	(13)	3298606
326	27.6	2.8	3.7	chr5	175730120	175730228	(5808031)	+	MIRb	SINE/MIR	19	126	(142)	3304009
408	32.6	8.0	0.6	chr5	175823492	175823664	(5714595)	C	L2a	LINE/L2	(954)	2465	2279	3304207
867	15.9	7.2	5.6	chr5	175824109	175824341	(5713918)	C	Charlie19a	DNA/hAT-Charlie	(0)	386	150	3304215
463	24.2	9.2	3.7	chr5	177390390	177390552	(4147707)	C	MIRb	SINE/MIR	(94)	174	2	3307317
255	39.1	0.0	1.8	chr5	177402766	177402877	(4135382)	C	MIR	SINE/MIR	(43)	219	110	3307345
44	24.5	0.8	2.3	chr5	177455323	177455452	(4082807)	+	(GCGCAC)n	Simple_repeat	1	131	(0)	3307451
19	12.4	0.0	0.0	chr5	177455614	177455648	(4082611)	+	(CGGGCT)n	Simple_repeat	1	35	(0)	3307452
213	35.1	13.0	0.7	chr5	177591883	177592023	(3946236)	+	MIR3	SINE/MIR	35	200	(68)	3307700
15	13.4	7.0	2.2	chr5	177592155	177592197	(3946062)	+	(GCG)n	Simple_repeat	1	46	(0)	3307701
342	34.8	10.4	2.2	chr5	178146328	178146556	(3391703)	C	MIRb	SINE/MIR	(8)	260	11	3308651
363	23.8	16.7	2.1	chr5	179558898	179559086	(1979173)	+	L1M5	LINE/L1	5254	5475	(767)	3311085
15	12.4	1.9	9.3	chr5	179796027	179796079	(1742180)	+	G-rich	Low_complexity	1	54	(0)	3311604
12	32.7	1.5	1.5	chr5	179806382	179806447	(1731812)	+	(GCGCCC)n	Simple_repeat	1	67	(0)	3311612
30	22.4	2.2	7.1	chr5	179806610	179806746	(1731513)	+	G-rich	Low_complexity	1	140	(0)	3311613
2005	13.7	0.0	0.3	chr5	180293939	180294237	(1244022)	+	AluSx1	SINE/Alu	6	303	(9)	3312368
325	30.3	5.2	0.0	chr5	180830727	180830835	(707424)	C	MER67A	LTR/ERV1	(15)	528	414	3313310
235	28.4	9.1	1.7	chr5	180831010	180831181	(707078)	C	MER67A	LTR/ERV1	(475)	186	1	3313310
12	12.2	3.7	0.0	chr5	181053322	181053348	(484911)	+	(GGCGG)n	Simple_repeat	1	28	(0)	3313575
12	20.1	5.0	0.0	chr5	181053620	181053659	(484600)	+	G-rich	Low_complexity	1	42	(0)	3313576
2468	8.0	0.3	0.0	chr5	181188094	181188405	(349854)	+	AluSp	SINE/Alu	1	313	(0)	3313823
670	1.4	0.0	0.0	chr5	181188416	181188488	(349771)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3313824
13	12.7	0.0	0.0	chr6	693188	693213	(170112766)	+	(AGGGG)n	Simple_repeat	1	26	(0)	3315114
651	29.7	12.6	6.1	chr6	1501880	1502286	(169303693)	C	L2b	LINE/L2	(629)	2790	2352	3316213
202	18.8	4.5	15.8	chr6	1502268	1502343	(169303636)	C	MIRb	SINE/MIR	(187)	81	15	3316217
12	10.3	6.1	2.9	chr6	2903423	2903455	(167902524)	+	(GGTCAG)n	Simple_repeat	1	35	(0)	3318087
8089	5.2	0.1	0.1	chr6	2908663	2909630	(167896349)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3318095
388	23.5	13.2	0.8	chr6	2932336	2932468	(167873511)	C	LTR41C	LTR/ERVL	(549)	152	1	3318122
5462	24.1	11.3	5.8	chr6	2932476	2932972	(167873007)	+	BLACKJACK	DNA/hAT-Blackjack	229	733	(2236)	3318123
354	30.1	5.0	0.0	chr6	3119363	3119475	(167686504)	C	MER5A	DNA/hAT-Charlie	(7)	182	64	3318432
246	29.9	1.5	1.5	chr6	3119553	3119620	(167686359)	+	MamSINE1	SINE/tRNA-RTE	133	200	(90)	3318433
32	3.0	0.0	0.0	chr6	3457092	3457125	(167348854)	+	(CTC)n	Simple_repeat	1	34	(0)	3318917
12	18.6	5.4	0.0	chr6	5004047	5004083	(165801896)	+	(CGCCC)n	Simple_repeat	1	39	(0)	3321336
438	29.0	6.1	0.6	chr6	5840358	5840513	(164965466)	+	MIR3	SINE/MIR	37	201	(7)	3322643
19	10.8	0.0	0.0	chr6	6811688	6811718	(163994261)	+	(GAG)n	Simple_repeat	1	31	(0)	3323954
945	9.6	0.0	0.0	chr6	7044289	7044403	(163761576)	+	AluJr	SINE/Alu	4	118	(194)	3324467
1827	14.2	0.0	3.0	chr6	7276300	7276594	(163529385)	+	AluSz6	SINE/Alu	3	288	(24)	3324867
15	18.8	7.0	1.6	chr6	7541463	7541519	(163264460)	+	(GGCGCAG)n	Simple_repeat	1	61	(0)	3325356
12	9.3	5.0	7.1	chr6	7541708	7541747	(163264232)	+	(CTCCCG)n	Simple_repeat	1	42	(0)	3325357
13	13.1	0.0	0.0	chr6	7726157	7726181	(163079798)	+	(CCG)n	Simple_repeat	1	25	(0)	3325635
1614	10.4	20.4	0.0	chr6	8064673	8064942	(162741037)	C	MER44A	DNA/TcMar-Tigger	(0)	339	1	3326106
18	22.7	1.7	3.3	chr6	8435410	8435469	(162370510)	+	(CTC)n	Simple_repeat	1	61	(0)	3326721
948	17.6	0.5	4.7	chr6	10722125	10722315	(160083664)	+	AluSx	SINE/Alu	113	295	(17)	3330060
233	23.8	0.0	0.0	chr6	10722321	10722383	(160083596)	C	L1ME3Cz	LINE/L1	(359)	638	576	3330063
566	28.5	6.2	1.0	chr6	13488014	13488242	(157317737)	C	MIRb	SINE/MIR	(0)	262	14	3334350
12	25.3	0.0	5.8	chr6	13574519	13574570	(157231409)	+	GA-rich	Low_complexity	1	52	(0)	3334517
635	28.6	12.1	6.3	chr6	14146416	14146826	(156659153)	C	UCON8	DNA	(189)	926	489	3335535
26	19.3	0.0	0.0	chr6	14146995	14147043	(156658936)	+	(TG)n	Simple_repeat	1	49	(0)	3335536
639	27.4	1.7	1.7	chr6	17589302	17589479	(153216500)	+	MER5B	DNA/hAT-Charlie	1	178	(0)	3341424
3554	16.0	2.0	8.1	chr6	17589730	17590002	(153215977)	+	Tigger4	DNA/TcMar-Tigger	2086	2181	(550)	3341425
12	14.1	7.3	2.3	chr6	17600548	17600588	(153205391)	+	G-rich	Low_complexity	1	44	(0)	3341453
518	28.9	3.0	1.9	chr6	17707390	17707551	(153098428)	+	MIRb	SINE/MIR	49	212	(56)	3341635
41	0.0	0.0	0.0	chr6	20211970	20212004	(150593975)	+	(AC)n	Simple_repeat	1	35	(0)	3345604
9157	14.8	3.4	9.4	chr6	20685888	20686221	(150119758)	C	L1MC1	LINE/L1	(617)	4642	4311	3346466
3363	10.1	8.2	0.0	chr6	20686222	20686704	(150119275)	+	MER1A	DNA/hAT-Charlie	4	529	(0)	3346469
181	25.0	0.0	0.0	chr6	21586935	21586978	(149219001)	+	L2b	LINE/L2	3328	3371	(4)	3347908
14	0.0	8.3	0.0	chr6	21954477	21954500	(148851479)	+	(AGGC)n	Simple_repeat	1	26	(0)	3348607
56	0.0	0.0	0.0	chr6	24645841	24645888	(146160091)	+	(AC)n	Simple_repeat	1	48	(0)	3352298
13	12.7	2.6	5.1	chr6	25279351	25279388	(145526591)	+	(CCCCG)n	Simple_repeat	1	39	(0)	3353384
1939	15.9	7.8	5.8	chr6	25637498	25637964	(145168015)	C	MER31A	LTR/ERV1	(8)	477	1	3353890
590	26.8	10.3	1.2	chr6	25637965	25638210	(145167769)	+	MLT1G1	LTR/ERVL-MaLR	252	522	(57)	3353889
491	27.6	10.6	8.2	chr6	26122929	26123343	(144682636)	C	MER101	LTR/ERV1	(36)	438	13	3354667
650	1.4	0.0	0.0	chr6	26537498	26537570	(144268409)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	3355427
21	18.4	0.0	2.0	chr6	27251567	27251617	(143554362)	+	G-rich	Low_complexity	1	51	(0)	3356580
44	0.0	0.0	0.0	chr6	27374386	27374423	(143431556)	+	(GT)n	Simple_repeat	1	38	(0)	3356791
2476	6.2	1.9	0.3	chr6	27473370	27473700	(143332279)	+	AluSx4	SINE/Alu	1	310	(0)	3356942
25	15.1	0.0	0.0	chr6	27593179	27593224	(143212755)	+	(TTGT)n	Simple_repeat	1	46	(0)	3357180
648	1.4	0.0	0.0	chr6	27688188	27688261	(143117718)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	3357376
13	0.0	0.0	0.0	chr6	27754388	27754404	(143051575)	+	(AAT)n	Simple_repeat	1	17	(0)	3357537
258	29.5	0.0	0.0	chr6	27754415	27754475	(143051504)	C	tRNA-Val-GTY	tRNA	(15)	61	1	3357538
5449	11.0	3.7	0.6	chr6	28335120	28335915	(142470064)	+	LTR25	LTR/ERV1	1	821	(23)	3358463
217	29.1	12.1	2.6	chr6	28587715	28587857	(142218122)	C	MIR1_Amn	SINE/MIR	(21)	187	32	3358865
187	30.7	7.3	8.2	chr6	28589183	28589292	(142216687)	C	L3b	LINE/CR1	(531)	4701	4593	3358868
666	0.0	0.0	0.0	chr6	28589379	28589450	(142216529)	+	tRNA-Gln-CAA	tRNA	1	72	(3)	3358869
624	1.2	0.0	20.8	chr6	28941053	28941158	(141864821)	+	tRNA-Leu-TTG	tRNA	1	84	(2)	3359510
15	21.8	2.7	0.0	chr6	31739966	31740002	(139065977)	+	(GC)n	Simple_repeat	1	38	(0)	3363802
16	0.0	0.0	0.0	chr6	31898644	31898660	(138907319)	+	(T)n	Simple_repeat	1	17	(0)	3364123
820	27.3	10.5	3.2	chr6	33570669	33571073	(137234906)	+	Charlie13a	DNA/hAT-Charlie	447	884	(630)	3366760
264	32.1	0.0	2.4	chr6	33632988	33633070	(137172909)	+	MIRc	SINE/MIR	158	238	(30)	3366889
396	18.3	3.1	0.0	chr6	33700738	33700830	(137105149)	C	MER5A1	DNA/hAT-Charlie	(70)	96	1	3367003
279	22.4	5.6	0.0	chr6	33848279	33848345	(136957634)	+	L2c	LINE/L2	3284	3354	(33)	3367223
15	17.8	2.6	0.0	chr6	33959322	33959359	(136846620)	+	G-rich	Low_complexity	1	39	(0)	3367368
14	15.7	0.0	5.1	chr6	34889208	34889246	(135916733)	+	G-rich	Low_complexity	1	39	(0)	3369411
823	26.5	1.6	3.0	chr6	36727101	36727439	(134078540)	+	L1ME4b	LINE/L1	587	890	(2)	3373167
7127	13.0	5.2	3.8	chr6	37221661	37222920	(133583059)	C	MER52C	LTR/ERV1	(0)	1278	1	3374268
18	25.9	1.6	1.6	chr6	37692421	37692482	(133113497)	+	G-rich	Low_complexity	1	63	(0)	3375146
371	32.4	2.2	2.4	chr6	38490137	38490319	(132315660)	+	MIR3	SINE/MIR	2	180	(28)	3376476
2471	8.3	0.3	0.0	chr6	38490320	38490619	(132315360)	C	AluSx	SINE/Alu	(11)	301	1	3376477
12	9.9	2.6	7.7	chr6	39314321	39314358	(131491621)	+	G-rich	Low_complexity	1	39	(0)	3377873
419	27.4	11.1	6.2	chr6	40329014	40329336	(130476643)	C	L2c	LINE/L2	(25)	3362	3022	3379289
281	22.1	14.0	0.0	chr6	40912270	40912355	(129893624)	C	MER5A1	DNA/hAT-Charlie	(0)	166	67	3380288
405	32.0	0.0	0.8	chr6	40912388	40912513	(129893466)	C	LTR67B	LTR/ERVL	(117)	503	379	3380289
378	30.4	9.4	1.5	chr6	40912604	40912740	(129893239)	C	LTR67B	LTR/ERVL	(446)	174	26	3380289
446	33.5	8.3	0.5	chr6	42393168	42393368	(128412611)	C	MIRc	SINE/MIR	(5)	263	46	3383161
672	28.3	6.3	5.0	chr6	42393605	42394064	(128411915)	+	L1ME4a	LINE/L1	5707	6119	(5)	3383162
245	35.8	0.0	2.1	chr6	43054011	43054107	(127751872)	C	MIR3	SINE/MIR	(17)	191	97	3384600
22	23.3	0.0	0.0	chr6	43054173	43054218	(127751761)	+	A-rich	Low_complexity	1	46	(0)	3384601
14	17.7	0.0	0.0	chr6	43243536	43243567	(127562412)	+	G-rich	Low_complexity	1	32	(0)	3384993
27	22.8	4.9	0.0	chr6	43243614	43243695	(127562284)	+	(GCC)n	Simple_repeat	1	86	(0)	3384994
12	21.6	0.0	0.0	chr6	44128179	44128210	(126677769)	+	G-rich	Low_complexity	1	32	(0)	3386613
12	16.4	5.9	0.0	chr6	44246276	44246309	(126559670)	+	(CATCC)n	Simple_repeat	1	36	(0)	3386851
1477	15.6	9.8	2.8	chr6	44273933	44274215	(126531764)	+	AluJr	SINE/Alu	1	305	(7)	3386889
308	31.9	12.4	0.6	chr6	44274240	44274409	(126531570)	C	MIRc	SINE/MIR	(52)	216	24	3386890
34	19.1	5.3	3.3	chr6	45422015	45422128	(125383851)	+	(GCG)n	Simple_repeat	1	120	(0)	3388617
428	31.2	10.5	1.3	chr6	46201594	46201817	(124604162)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	364	3389822
273	18.2	0.0	0.0	chr6	46201908	46201951	(124604028)	C	MLT1L	LTR/ERVL-MaLR	(419)	143	100	3389813
254	21.1	1.7	1.7	chr6	46201952	46201964	(124604015)	C	LTR67B	LTR/ERVL	(497)	122	66	3389823
197	32.2	0.0	1.7	chr6	47520325	47520384	(123285595)	C	MIR3	SINE/MIR	(62)	146	88	3391896
1800	25.0	6.9	13.0	chr6	47520424	47521148	(123284831)	C	L1MDa	LINE/L1	(5939)	694	17	3391897
448	30.1	6.6	4.5	chr6	50543703	50543925	(120262054)	C	OldhAT1	DNA/hAT-Ac	(2334)	514	287	3395826
14	13.8	2.9	2.8	chr6	52664740	52664774	(118141205)	+	(TCCC)n	Simple_repeat	1	36	(0)	3398909
343	16.0	5.1	0.0	chr6	53062175	53062249	(117743730)	+	L1MB4	LINE/L1	6078	6156	(24)	3399479
20	25.2	0.0	7.6	chr6	53794964	53794988	(117010991)	+	(GCG)n	Simple_repeat	1	52	(51)	3400740
13	22.8	1.5	7.6	chr6	53794989	53795053	(117010926)	+	(GCGG)n	Simple_repeat	1	66	(0)	3400741
20	25.2	0.0	7.6	chr6	53795054	53795075	(117010904)	+	(GCG)n	Simple_repeat	53	103	(0)	3400740
12	5.5	0.0	0.0	chr6	53795238	53795256	(117010723)	+	(GGC)n	Simple_repeat	1	19	(0)	3400742
703	34.2	3.0	0.8	chr6	61909627	61909882	(108896097)	C	MER130	DNA	(334)	1260	999	3408623
264	24.3	10.8	0.9	chr6	63598120	63598227	(107207752)	+	MLT1K	LTR/ERVL-MaLR	148	267	(343)	3410845
1714	27.1	5.9	3.2	chr6	63598416	63598975	(107207004)	C	LTR33C	LTR/ERVL	(29)	600	25	3410846
12	20.2	2.9	0.0	chr6	70668264	70668297	(100137682)	+	(GGCG)n	Simple_repeat	1	35	(0)	3419586
17	18.6	0.0	0.0	chr6	70956192	70956228	(99849751)	+	(GCGGCT)n	Simple_repeat	1	37	(0)	3419938
455	29.6	1.4	0.7	chr6	76230621	76230766	(94575213)	+	LTR33	LTR/ERVL	369	515	(0)	3427437
21	20.9	1.6	3.1	chr6	79537106	79537169	(91268810)	+	(CCACCT)n	Simple_repeat	1	65	(0)	3431371
31	23.0	0.9	4.7	chr6	83067992	83068096	(87737883)	+	G-rich	Low_complexity	1	106	(0)	3436015
21	29.4	0.0	0.0	chr6	89375443	89375495	(81430484)	+	(GT)n	Simple_repeat	1	53	(0)	3444652
237	28.7	8.7	2.1	chr6	90287060	90287155	(80518824)	C	Tigger16a	DNA/TcMar-Tigger	(777)	180	78	3446156
291	31.6	6.0	3.7	chr6	91654190	91654353	(79151626)	+	MIRc	SINE/MIR	26	193	(75)	3447967
440	28.4	2.1	11.9	chr6	91860726	91860985	(78944994)	+	LTR33A	LTR/ERVL	264	497	(23)	3448220
9811	13.3	2.5	1.5	chr6	96693553	96695693	(74110286)	+	L1PBa1	LINE/L1	251	2428	(4435)	3454011
16	25.0	0.0	2.0	chr6	96837391	96837439	(73968540)	+	GA-rich	Low_complexity	1	49	(0)	3454211
14	26.7	0.0	0.0	chr6	96837420	96837460	(73968519)	+	(GGC)n	Simple_repeat	1	41	(0)	3454212
404	29.3	7.7	8.8	chr6	98648486	98649001	(72156978)	C	LTR33A	LTR/ERVL	(0)	520	24	3456495
453	24.3	2.8	8.0	chr6	98924916	98925027	(71880952)	+	L2a	LINE/L2	3319	3424	(2)	3456881
382	27.1	2.9	9.8	chr6	99305400	99305583	(71500396)	+	MIR	SINE/MIR	22	192	(70)	3457399
15	9.3	7.8	5.5	chr6	100881405	100881455	(69924524)	+	(CCTCCG)n	Simple_repeat	1	55	(0)	3459594
420	33.5	8.4	1.6	chr6	101116718	101116905	(69689074)	C	MIRb	SINE/MIR	(10)	258	57	3459880
321	34.0	7.6	5.9	chr6	101117294	101117790	(69688189)	C	MLT1N2	LTR/ERVL-MaLR	(1)	561	20	3459881
1813	4.7	0.0	0.5	chr6	107027849	107028060	(63777919)	+	AluY	SINE/Alu	1	211	(100)	3468021
15	22.7	5.7	2.7	chr6	107028291	107028360	(63777619)	+	(CGCGC)n	Simple_repeat	1	74	(0)	3468022
260	18.8	5.5	0.0	chr6	109690606	109690674	(61115305)	+	Arthur1B	DNA/hAT-Tip100	1078	1150	(75)	3472533
11	21.0	2.5	2.4	chr6	114342591	114342630	(56463349)	+	(GCCGGA)n	Simple_repeat	1	41	(0)	3479981
18	24.6	0.0	0.0	chr6	116100826	116100873	(54705106)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3482130
15	7.5	3.6	0.0	chr6	118912584	118912611	(51893368)	+	(TATAC)n	Simple_repeat	1	29	(0)	3485843
14	18.5	0.0	0.0	chr6	122996244	122996274	(47809705)	+	(CAG)n	Simple_repeat	1	31	(0)	3491135
18	22.1	0.0	0.0	chr6	124961901	124961943	(45844036)	+	(GTGC)n	Simple_repeat	1	43	(0)	3493631
15314	12.9	1.6	0.7	chr6	125151313	125153651	(45652328)	+	Tigger1	DNA/TcMar-Tigger	55	2416	(2)	3493929
12	16.1	0.0	3.3	chr6	125791095	125791124	(45014855)	+	(CGC)n	Simple_repeat	1	30	(0)	3494828
1670	24.9	6.6	2.7	chr6	131377486	131378012	(39427967)	C	MLT1E2	LTR/ERVL-MaLR	(78)	549	1	3502236
21	0.0	0.0	0.0	chr6	133741779	133741801	(37064178)	+	(AC)n	Simple_repeat	1	23	(0)	3505640
1713	26.0	16.1	2.6	chr6	138815100	138815834	(31990145)	+	LTR82A	LTR/ERVL	8	860	(12)	3513605
41	2.6	0.0	0.0	chr6	143061109	143061148	(27744831)	+	(TG)n	Simple_repeat	1	40	(0)	3519337
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
411	24.4	9.2	0.0	chr6	144008774	144008892	(26797087)	C	MIRb	SINE/MIR	(21)	247	117	3520696
17	15.8	5.9	1.9	chr6	144064364	144064414	(26741565)	+	(GCCCCCGC)n	Simple_repeat	1	54	(0)	3520784
14	5.0	0.0	0.0	chr6	144285621	144285641	(26520338)	+	(TCTT)n	Simple_repeat	1	21	(0)	3521176
17	21.5	0.0	3.9	chr6	147202754	147202805	(23603174)	+	(CTTC)n	Simple_repeat	1	52	(0)	3525090
771	18.2	7.3	4.6	chr6	148972771	148972943	(21833036)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	3527735
13	9.7	5.7	2.7	chr6	149864264	149864298	(20941681)	+	(GCCCTGC)n	Simple_repeat	1	37	(0)	3529318
201	30.4	10.7	1.1	chr6	149963663	149963755	(20842224)	+	MIR1_Amn	SINE/MIR	84	186	(44)	3529448
203	27.5	18.5	0.0	chr6	150069424	150069517	(20736462)	C	MIR1_Amn	SINE/MIR	(70)	192	81	3529611
15	12.1	7.9	2.4	chr6	150069666	150069703	(20736276)	+	(AT)n	Simple_repeat	1	41	(0)	3529612
32	3.2	0.0	0.0	chr6	153130478	153130509	(17675470)	+	(AC)n	Simple_repeat	1	32	(0)	3534482
316	33.6	9.0	5.8	chr6	154997015	154997324	(15808655)	+	L2c	LINE/L2	2910	3230	(157)	3537438
552	32.0	6.8	0.0	chr6	154997349	154997526	(15808453)	+	MER91A	DNA/hAT-Tip100	5	195	(1)	3537439
247	23.3	1.6	0.0	chr6	155013694	155013753	(15792226)	+	Tigger19a	DNA/TcMar-Tigger	261	321	(2)	3537475
2266	11.7	0.0	0.0	chr6	155040510	155040817	(15765162)	C	AluSx	SINE/Alu	(3)	309	2	3537519
315	33.8	9.8	4.3	chr6	156600887	156601164	(14204815)	C	MLT1J	LTR/ERVL-MaLR	(201)	311	17	3539699
182	24.1	1.8	0.0	chr6	156601205	156601258	(14204721)	C	L2a	LINE/L2	(1)	3425	3371	3539700
1114	22.6	14.1	4.2	chr6	157533148	157533677	(13272302)	C	L2a	LINE/L2	(1)	3425	2858	3541067
751	22.2	11.5	1.6	chr6	157533805	157534047	(13271932)	+	Kanga1b	DNA/TcMar-Tc2	507	776	(3)	3541068
1279	17.6	4.6	2.3	chr6	157833844	157834146	(12971833)	C	LTR45B	LTR/ERV1	(0)	783	182	3541553
880	18.8	0.7	1.9	chr6	157834151	157834339	(12971640)	C	AluJb	SINE/Alu	(0)	312	131	3541554
15	12.4	5.7	0.0	chr6	158869856	158869890	(11936089)	+	G-rich	Low_complexity	1	37	(0)	3543275
18	17.6	2.0	3.9	chr6	159042978	159043027	(11762952)	+	(TTTC)n	Simple_repeat	1	51	(0)	3543577
28	17.5	2.3	5.7	chr6	160991642	160991727	(9814252)	+	(CGC)n	Simple_repeat	1	88	(0)	3546054
25	24.0	1.0	6.0	chr6	160991941	160991956	(9814023)	+	(GCC)n	Simple_repeat	1	25	(75)	3546055
12	18.3	0.0	3.0	chr6	161371134	161371162	(9434817)	+	(ATAT)n	Simple_repeat	1	29	(0)	3546583
2010	13.9	0.7	0.7	chr6	161371163	161371464	(9434515)	C	AluSq2	SINE/Alu	(11)	302	1	3546584
59	0.0	0.0	0.0	chr6	164251665	164251714	(6554265)	+	(AC)n	Simple_repeat	1	50	(0)	3550531
1219	22.5	8.9	0.6	chr6	166439659	166440006	(4365973)	C	MER89	LTR/ERV1	(176)	383	4	3553273
738	19.4	1.2	2.4	chr6	166440009	166440172	(4365807)	+	MLT1D	LTR/ERVL-MaLR	339	500	(5)	3553274
293	23.8	1.6	0.0	chr6	167531418	167531480	(3274499)	+	MIRc	SINE/MIR	76	139	(129)	3554525
832	21.0	11.0	2.3	chr6	168001145	168001359	(2804620)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	1	3555029
2220	15.7	2.0	2.7	chr6	168154212	168154592	(2651387)	C	MER57B2	LTR/ERV1	(17)	386	1	3555199
363	35.3	9.8	0.0	chr6	168159580	168159735	(2646244)	+	MIRb	SINE/MIR	14	186	(82)	3555205
487	26.7	8.8	0.7	chr6	168159976	168160122	(2645857)	+	MIR	SINE/MIR	16	175	(87)	3555206
257	33.7	15.4	0.0	chr6	170233837	170234023	(571956)	+	MIRb	SINE/MIR	29	249	(19)	3557242
19	18.3	0.0	5.5	chr7	322347	322401	(159023572)	+	(CCCCGC)n	Simple_repeat	1	55	(0)	3558191
12	26.6	0.0	2.3	chr7	519254	519296	(158826677)	+	G-rich	Low_complexity	1	43	(0)	3558444
833	10.5	0.0	0.0	chr7	813173	813277	(158532696)	+	AluSq2	SINE/Alu	207	311	(2)	3558948
14	7.4	6.9	0.0	chr7	816429	816457	(158529516)	+	(CCCT)n	Simple_repeat	1	31	(0)	3558954
23	14.8	3.1	4.5	chr7	816458	816492	(158529481)	+	(CCCCTC)n	Simple_repeat	2	67	(0)	3558955
1644	15.4	0.4	1.5	chr7	993518	993784	(158352189)	+	AluJb	SINE/Alu	27	290	(22)	3559170
23	23.2	3.2	4.2	chr7	1044451	1044543	(158301430)	+	G-rich	Low_complexity	1	96	(0)	3559213
218	33.6	6.3	1.6	chr7	1421927	1422047	(157923926)	C	MIR3	SINE/MIR	(52)	156	30	3559890
205	33.0	9.6	0.0	chr7	1422171	1422331	(157923642)	C	MIR1_Amn	SINE/MIR	(87)	181	1	3559891
26	0.0	0.0	0.0	chr7	1504782	1504806	(157841167)	+	(AAT)n	Simple_repeat	1	25	(0)	3559982
2353	6.4	0.0	0.7	chr7	1504847	1505129	(157840844)	C	AluSx1	SINE/Alu	(7)	305	25	3559983
604	26.1	6.2	0.0	chr7	1556501	1556680	(157789293)	+	L1MB5	LINE/L1	5983	6174	(0)	3560075
12	19.1	3.8	5.5	chr7	1725345	1725397	(157620576)	+	G-rich	Low_complexity	1	55	(0)	3560381
15	28.8	4.1	1.3	chr7	1725429	1725501	(157620472)	+	GA-rich	Low_complexity	1	76	(0)	3560382
648	17.9	5.1	4.7	chr7	2314817	2316847	(157029126)	+	(CACT)n	Simple_repeat	1	2135	(0)	3561121
13	24.0	0.0	0.0	chr7	2493708	2493742	(156852231)	+	(TCCC)n	Simple_repeat	1	35	(0)	3561537
255	33.0	14.8	0.0	chr7	2518493	2518607	(156827366)	C	L2a	LINE/L2	(3)	3423	3289	3561572
251	5.9	0.0	0.0	chr7	3582495	3582528	(155763445)	C	L1PREC2	LINE/L1	(158)	6002	5969	3563510
988	11.2	4.7	0.0	chr7	3582530	3582709	(155763264)	+	L1PREC2	LINE/L1	5992	6160	(0)	3563510
1715	8.6	0.4	3.7	chr7	4262019	4262291	(155083682)	C	AluSx1	SINE/Alu	(0)	312	47	3564479
196	24.6	8.4	0.0	chr7	4995058	4995122	(154350851)	+	MIR3	SINE/MIR	134	204	(4)	3566008
323	23.3	12.9	3.6	chr7	4995139	4995311	(154350662)	C	MIRb	SINE/MIR	(0)	268	85	3566009
181	32.3	0.0	1.5	chr7	5562540	5562605	(153783368)	C	L2a	LINE/L2	(346)	3080	3016	3567345
2307	6.3	1.7	0.3	chr7	5563836	5564122	(153781851)	C	AluSp	SINE/Alu	(21)	292	2	3567346
13	9.4	8.3	2.6	chr7	6059100	6059135	(153286838)	+	(GCCCA)n	Simple_repeat	1	39	(0)	3568487
38	24.9	4.2	7.0	chr7	6272188	6272447	(153073526)	+	(CCCCGGC)n	Simple_repeat	1	271	(0)	3568920
445	15.8	1.3	0.0	chr7	6349150	6349225	(152996748)	+	L1MB3	LINE/L1	6060	6136	(47)	3569144
2675	4.6	0.0	0.0	chr7	6349232	6349535	(152996438)	+	AluY	SINE/Alu	1	304	(7)	3569145
17	13.3	7.1	0.0	chr7	6590130	6590171	(152755802)	+	(GCAG)n	Simple_repeat	1	45	(0)	3569752
13	13.1	0.0	0.0	chr7	7567205	7567229	(151778744)	+	(GCCG)n	Simple_repeat	1	25	(0)	3571261
12	16.0	0.0	3.3	chr7	8262052	8262081	(151083892)	+	(CCCGC)n	Simple_repeat	1	30	(0)	3572279
13	21.9	2.3	2.2	chr7	16646094	16646137	(142699836)	+	G-rich	Low_complexity	1	45	(0)	3582782
32	3.0	0.0	0.0	chr7	16646203	16646236	(142699737)	+	(CTG)n	Simple_repeat	1	34	(0)	3582783
15	19.6	0.0	0.0	chr7	16753364	16753398	(142592575)	+	(TTCC)n	Simple_repeat	1	35	(0)	3582983
14	18.3	3.6	5.3	chr7	16753584	16753638	(142592335)	+	(CCCTCGC)n	Simple_repeat	1	57	(0)	3582984
14	13.0	5.9	0.0	chr7	16753728	16753761	(142592212)	+	G-rich	Low_complexity	1	36	(0)	3582985
11	18.1	2.4	4.8	chr7	16753799	16753839	(142592134)	+	(CGCCGCG)n	Simple_repeat	1	42	(0)	3582986
2093	16.7	8.4	0.3	chr7	17785008	17785380	(141560593)	C	MSTB	LTR/ERVL-MaLR	(2)	424	19	3584360
15	21.3	4.8	3.0	chr7	20798059	20798121	(138547852)	+	(GGCGCGGC)n	Simple_repeat	1	66	(0)	3588273
18	16.4	0.0	4.4	chr7	20798115	20798159	(138547814)	+	(GCCCC)n	Simple_repeat	1	45	(0)	3588274
1814	16.2	11.7	3.1	chr7	22094825	22095213	(137250760)	C	MSTA	LTR/ERVL-MaLR	(1)	427	1	3590198
276	17.8	22.3	1.0	chr7	23105386	23105487	(136240486)	C	L2a	LINE/L2	(0)	3426	3297	3591730
18	0.0	0.0	0.0	chr7	23105519	23105538	(136240435)	+	(A)n	Simple_repeat	1	20	(0)	3591731
457	30.6	6.4	8.8	chr7	24343080	24343866	(135002107)	+	L2b	LINE/L2	2598	3413	(13)	3593721
509	29.6	7.4	2.3	chr7	24343883	24344138	(135001835)	+	L1MEj	LINE/L1	454	723	(1437)	3593723
23	14.1	4.3	5.5	chr7	25951373	25951442	(133394531)	+	G-rich	Low_complexity	1	73	(0)	3596156
578	21.9	8.8	7.0	chr7	26061944	26062079	(133283894)	C	L2a	LINE/L2	(0)	3426	3277	3596345
457	20.0	10.2	2.6	chr7	26291508	26291661	(133054312)	C	L1ME2z	LINE/L1	(4)	6440	6274	3596788
16	4.0	0.0	6.7	chr7	26291981	26292010	(133053963)	+	(CGC)n	Simple_repeat	1	30	(0)	3596789
13	22.8	0.0	0.0	chr7	26292040	26292075	(133053898)	+	(GCCCG)n	Simple_repeat	1	36	(0)	3596790
15	13.9	0.0	0.0	chr7	26515526	26515549	(132830424)	+	(CT)n	Simple_repeat	1	24	(0)	3597176
13	24.6	0.0	4.3	chr7	27242546	27242592	(132103381)	+	(TCTG)n	Simple_repeat	1	47	(0)	3598162
14	17.5	0.0	0.0	chr7	28956670	28956701	(130389272)	+	(CTGCAG)n	Simple_repeat	1	32	(0)	3600827
12	12.7	8.5	3.9	chr7	30284482	30284528	(129061445)	+	(GGCGGA)n	Simple_repeat	1	51	(0)	3602921
249	16.0	0.0	2.0	chr7	30731966	30732016	(128613957)	+	MER31A	LTR/ERV1	353	402	(83)	3603563
16	20.8	0.0	0.0	chr7	33905439	33905471	(125440502)	+	(C)n	Simple_repeat	1	33	(0)	3608572
15	30.3	1.5	1.5	chr7	33905472	33905499	(125440474)	+	(TCCC)n	Simple_repeat	6	67	(0)	3608573
13	21.9	0.0	2.6	chr7	35695017	35695055	(123650918)	+	G-rich	Low_complexity	1	39	(0)	3611056
13	7.5	7.1	0.0	chr7	38909068	38909095	(120436878)	+	(CTCCA)n	Simple_repeat	1	30	(0)	3615797
12	10.1	8.3	5.8	chr7	42911917	42911964	(116434009)	+	(GCACGCGA)n	Simple_repeat	1	52	(0)	3621833
37	19.7	1.4	8.3	chr7	43582939	43583085	(115762888)	+	G-rich	Low_complexity	1	136	(0)	3622832
1162	13.0	0.0	1.2	chr7	43594115	43594276	(115751697)	+	AluJr	SINE/Alu	140	299	(13)	3622850
389	29.0	16.5	3.3	chr7	43594277	43594512	(115751461)	+	L3	LINE/CR1	3683	3944	(155)	3622847
696	27.8	4.0	12.7	chr7	43594649	43594782	(115751191)	C	MIR	SINE/MIR	(10)	252	117	3622851
12	4.5	4.0	3.9	chr7	43906652	43906676	(115439297)	+	(GCCC)n	Simple_repeat	1	26	(0)	3623407
14	12.0	0.0	3.3	chr7	43906691	43906720	(115439253)	+	(GGTGA)n	Simple_repeat	1	30	(0)	3623408
192	27.3	7.2	0.0	chr7	43907001	43907077	(115438896)	+	MIRc	SINE/MIR	71	153	(115)	3623409
3218	1.6	0.0	0.0	chr7	44200346	44200726	(115145247)	+	L1PA4	LINE/L1	5773	6153	(2)	3623952
22	13.4	0.0	0.0	chr7	44200737	44200770	(115145203)	+	(A)n	Simple_repeat	1	34	(0)	3623953
13	20.4	0.0	4.7	chr7	44215738	44215780	(115130193)	+	(CACCTGC)n	Simple_repeat	1	43	(0)	3623972
184	12.5	0.0	0.0	chr7	44286108	44286139	(115059834)	+	MIR1_Amn	SINE/MIR	112	143	(87)	3624022
44	27.5	3.3	4.1	chr7	44325726	44325936	(115020037)	+	(CACCTG)n	Simple_repeat	1	218	(0)	3624064
2346	7.1	0.0	2.0	chr7	45768119	45768413	(113577560)	C	AluSg7	SINE/Alu	(20)	289	1	3626330
326	24.8	20.1	0.5	chr7	45854146	45854368	(113491605)	+	L1M4c	LINE/L1	937	1214	(5170)	3626522
11842	11.7	1.2	1.6	chr7	46015232	46018455	(113327518)	+	L1PA8A	LINE/L1	120	3343	(3118)	3626708
32	5.3	0.0	0.0	chr7	50450392	50450430	(108895543)	+	(CGTG)n	Simple_repeat	1	39	(0)	3632383
12	18.4	5.4	0.0	chr7	50450432	50450468	(108895505)	+	G-rich	Low_complexity	1	39	(0)	3632384
257	27.4	15.2	1.0	chr7	51522295	51522390	(107823583)	+	MIRc	SINE/MIR	3	114	(154)	3633802
13	16.3	2.8	2.7	chr7	55365947	55365982	(103979991)	+	(CGG)n	Simple_repeat	1	37	(0)	3638526
562	27.8	12.3	3.1	chr7	55527710	55528016	(103817957)	+	L1MC5	LINE/L1	5255	5554	(570)	3638766
181	24.2	12.0	1.5	chr7	65216330	65216396	(94129577)	+	UCON132b	DNA/hAT-Tip100	24	98	(50)	3647493
66	21.6	2.4	1.7	chr7	65216693	65216765	(94129208)	+	(TTTC)n	Simple_repeat	1	94	(78)	3647494
17	24.6	0.0	0.0	chr7	65216766	65216801	(94129172)	+	(T)n	Simple_repeat	1	36	(0)	3647495
15	13.9	0.0	0.0	chr7	65251756	65251779	(94094194)	+	(T)n	Simple_repeat	1	24	(0)	3647554
181	24.2	12.0	1.5	chr7	65722199	65722265	(93623708)	+	UCON132b	DNA/hAT-Tip100	24	98	(50)	3648301
63	22.9	1.8	1.8	chr7	65722561	65722634	(93623339)	+	(TTTC)n	Simple_repeat	1	95	(73)	3648302
17	24.6	0.0	0.0	chr7	65722635	65722670	(93623303)	+	(T)n	Simple_repeat	1	36	(0)	3648303
1107	14.5	0.0	0.0	chr7	66592458	66592623	(92753350)	+	AluSx	SINE/Alu	146	311	(1)	3650350
376	19.4	0.0	0.0	chr7	66592633	66592694	(92753279)	C	MLT1B	LTR/ERVL-MaLR	(99)	291	230	3650351
385	31.4	17.1	3.1	chr7	67460384	67460738	(91885235)	+	L2a	LINE/L2	2989	3403	(23)	3652289
225	15.2	3.3	7.8	chr7	67463093	67463156	(91882817)	+	LTR40c	LTR/ERVL	150	210	(255)	3652294
183	28.0	10.7	0.0	chr7	68455679	68455753	(90890220)	C	L2a	LINE/L2	(0)	3426	3343	3654501
723	25.4	5.2	0.5	chr7	70376287	70376488	(88969485)	C	MER58C	DNA/hAT-Charlie	(3)	212	1	3658219
189	30.8	7.1	0.0	chr7	73683366	73683430	(85662543)	+	MamRTE1	LINE/RTE-BovB	857	926	(2886)	3665233
12	20.2	0.0	6.7	chr7	73738869	73738913	(85607060)	+	(CCGCC)n	Simple_repeat	1	45	(0)	3665345
2253	11.6	0.0	0.0	chr7	75040178	75040479	(84305494)	+	AluSz6	SINE/Alu	1	302	(10)	3668635
14	19.7	4.2	2.0	chr7	75914944	75914991	(83430982)	+	(GCCGG)n	Simple_repeat	1	50	(0)	3670900
311	33.6	8.4	6.2	chr7	75965931	75966189	(83379784)	+	MIRb	SINE/MIR	3	265	(3)	3671031
21	9.5	0.0	0.0	chr7	78020089	78020122	(81325851)	+	(CCACCC)n	Simple_repeat	1	34	(0)	3674884
3816	15.0	2.1	0.0	chr7	78968871	78969522	(80376451)	+	LTR9C	LTR/ERV1	1	666	(0)	3676162
3643	18.9	3.8	1.0	chr7	80875459	80876169	(78469804)	+	MER44C	DNA/TcMar-Tigger	2	733	(0)	3678755
652	28.1	8.7	1.9	chr7	80876399	80876612	(78469361)	+	MIR	SINE/MIR	8	237	(25)	3678756
2235	9.3	2.0	1.0	chr7	80935683	80935982	(78409991)	+	AluY	SINE/Alu	1	303	(8)	3678823
345	39.5	2.3	5.4	chr7	80936091	80936406	(78409567)	C	HAL1	LINE/L1	(2193)	314	9	3678824
14	3.8	7.4	0.0	chr7	90605069	90605095	(68740878)	+	(GTTTG)n	Simple_repeat	1	29	(0)	3691368
16	9.3	0.0	0.0	chr7	91126828	91126850	(68219123)	+	(T)n	Simple_repeat	1	23	(0)	3692055
395	33.3	5.8	3.6	chr7	91424383	91424603	(67921370)	+	OldhAT1	DNA/hAT-Ac	149	374	(2474)	3692451
16	8.7	0.0	0.0	chr7	91940884	91940908	(67405065)	+	(GGC)n	Simple_repeat	1	25	(0)	3693107
16	31.2	0.0	0.0	chr7	92246063	92246121	(67099852)	+	(GGCGGT)n	Simple_repeat	1	59	(0)	3693578
13	24.4	4.2	0.0	chr7	92246093	92246140	(67099833)	+	G-rich	Low_complexity	1	50	(0)	3693579
16	0.0	0.0	0.0	chr7	94054548	94054564	(65291409)	+	(A)n	Simple_repeat	1	17	(0)	3696093
12	8.8	10.5	2.4	chr7	95772508	95772545	(63573428)	+	G-rich	Low_complexity	1	42	(0)	3698469
15	29.2	2.9	1.4	chr7	95772666	95772733	(63573240)	+	(CCG)n	Simple_repeat	1	70	(0)	3698470
12	21.7	0.0	0.0	chr7	95772813	95772844	(63573129)	+	(CCACC)n	Simple_repeat	1	32	(0)	3698471
13	4.3	3.9	3.7	chr7	98287539	98287564	(61058409)	+	(GGGCT)n	Simple_repeat	1	27	(0)	3702259
207	20.5	0.0	0.0	chr7	98421313	98421351	(60924622)	C	MIR1_Amn	SINE/MIR	(88)	142	104	3702544
1577	19.2	0.0	4.3	chr7	98421358	98421535	(60924438)	C	AluJb	SINE/Alu	(9)	303	137	3702545
182	25.8	12.0	1.5	chr7	98433225	98433291	(60912682)	+	UCON132b	DNA/hAT-Tip100	24	98	(50)	3702580
197	18.3	19.3	6.6	chr7	98433439	98433514	(60912459)	C	OldhAT1	DNA/hAT-Ac	(216)	2632	2545	3702581
132	2.2	2.1	0.7	chr7	98433589	98433731	(60912242)	+	(TTTC)n	Simple_repeat	1	146	(0)	3702582
276	10.5	0.0	0.0	chr7	98745957	98745994	(60599979)	C	MER77B	LTR/ERVL	(72)	628	591	3703302
31	17.8	2.5	1.2	chr7	98745995	98746051	(60599922)	+	(TTTGT)n	Simple_repeat	1	56	(0)	3703303
1914	15.2	0.3	0.7	chr7	98746052	98746353	(60599620)	C	AluJb	SINE/Alu	(10)	302	2	3703304
271	34.1	1.5	7.5	chr7	98836832	98836977	(60508996)	C	MIR	SINE/MIR	(98)	164	28	3703530
278	22.5	4.1	3.4	chr7	98837223	98837316	(60508657)	+	MamGypLTR1b	LTR/Gypsy	4	92	(692)	3703531
1211	12.3	0.0	0.0	chr7	99466389	99466558	(59879415)	C	AluSx	SINE/Alu	(142)	170	1	3704784
1253	13.9	2.5	0.5	chr7	99500501	99500694	(59845279)	C	AluSx3	SINE/Alu	(31)	280	83	3704872
2517	6.7	0.0	0.0	chr7	100451081	100451378	(58894595)	+	AluSx	SINE/Alu	4	301	(11)	3706612
29	2.2	5.9	3.7	chr7	100479256	100479306	(58866667)	+	(CTC)n	Simple_repeat	1	54	(0)	3706677
17	30.0	0.0	0.0	chr7	100479352	100479408	(58866565)	+	(CTGCTG)n	Simple_repeat	1	57	(0)	3706678
15	22.8	7.5	2.3	chr7	100966449	100966481	(58379492)	+	(GGCGCT)n	Simple_repeat	1	52	(34)	3707725
16	11.6	0.0	0.0	chr7	100966482	100966509	(58379464)	+	(GCT)n	Simple_repeat	1	28	(0)	3707726
15	22.8	7.5	2.3	chr7	100966510	100966528	(58379445)	+	(GGCGCT)n	Simple_repeat	53	86	(0)	3707725
12	19.8	2.3	4.4	chr7	100966552	100966595	(58379378)	+	G-rich	Low_complexity	1	45	(0)	3707727
830	9.3	4.8	0.0	chr7	101252592	101252709	(58093264)	+	L1PREC2	LINE/L1	6037	6160	(0)	3708331
1865	14.3	0.7	0.0	chr7	101543175	101543440	(57802533)	C	AluJo	SINE/Alu	(15)	297	30	3709086
5058	12.0	0.3	4.2	chr7	101629186	101629993	(57715980)	C	LTR1	LTR/ERV1	(7)	776	1	3709264
36	2.7	0.0	0.0	chr7	101743688	101743725	(57602248)	+	(CCT)n	Simple_repeat	1	38	(0)	3709558
1386	14.7	10.0	4.5	chr7	101895892	101896192	(57449781)	C	AluJr	SINE/Alu	(0)	312	2	3709889
16	9.7	0.0	0.0	chr7	112449827	112449848	(46896125)	+	(G)n	Simple_repeat	1	22	(0)	3725833
532	35.5	4.4	4.8	chr7	122383827	122384142	(36961831)	C	LFSINE_Vert	SINE/tRNA	(26)	433	119	3739023
2550	14.2	2.1	2.6	chr7	124009309	124009733	(35336240)	+	MSTB	LTR/ERVL-MaLR	4	426	(0)	3741283
36	2.7	0.0	0.0	chr7	124032403	124032440	(35313533)	+	(GCT)n	Simple_repeat	1	38	(0)	3741320
14	15.3	2.6	2.6	chr7	124766345	124766382	(34579591)	+	G-rich	Low_complexity	1	39	(0)	3742266
2044	16.9	7.2	1.7	chr7	125126185	125126588	(34219385)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3742748
262	17.9	1.8	0.0	chr7	126696148	126696203	(32649770)	C	MER96B	DNA/hAT-Tip100	(0)	417	361	3744756
2057	10.6	0.3	0.3	chr7	126696230	126696524	(32649449)	C	L1PA10	LINE/L1	(11)	6157	5863	3744757
200	31.6	11.4	3.2	chr7	128200836	128201116	(31144857)	C	L2c	LINE/L2	(610)	2809	2503	3746782
419	10.0	1.6	0.0	chr7	128344082	128344141	(31001832)	+	U7	snRNA	2	62	(1)	3747039
910	24.5	7.9	6.8	chr7	129824681	129825091	(29520882)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	143	3749923
16	24.7	0.0	0.0	chr7	129825231	129825265	(29520708)	+	(TC)n	Simple_repeat	1	35	(0)	3749924
1763	13.0	5.7	2.2	chr7	131537324	131537593	(27808380)	+	AluSx4	SINE/Alu	2	281	(29)	3752976
1484	27.1	5.6	1.3	chr7	131537610	131538069	(27807904)	C	L1ME3A	LINE/L1	(37)	6136	5656	3752977
213	29.5	1.1	6.4	chr7	131557169	131557262	(27788711)	+	MIR1_Amn	SINE/MIR	71	159	(71)	3753012
867	19.0	1.1	3.7	chr7	132277771	132277961	(27068012)	C	MER58A	DNA/hAT-Charlie	(10)	214	29	3754162
20	26.7	4.0	0.0	chr7	132576237	132576258	(26769715)	+	(CGTGTG)n	Simple_repeat	1	78	(0)	3754590
23	24.6	0.0	0.0	chr7	132576259	132576311	(26769662)	+	(GT)n	Simple_repeat	1	53	(0)	3754591
11	7.5	6.7	3.1	chr7	132576480	132576509	(26769464)	+	(GCCTCT)n	Simple_repeat	1	32	(0)	3754592
15	14.4	0.0	0.0	chr7	134891699	134891722	(24454251)	+	(T)n	Simple_repeat	1	24	(0)	3758187
1190	28.9	2.8	1.4	chr7	137209286	137209643	(22136330)	C	ERV3-16A3_I-int	LTR/ERVL	(3676)	1320	958	3761654
24	30.2	2.6	2.6	chr7	137846558	137846671	(21499302)	+	(GCC)n	Simple_repeat	1	117	(0)	3762478
2088	20.3	7.8	3.7	chr7	138499311	138499766	(20846207)	C	MER70B	LTR/ERVL	(102)	476	1	3763747
15	17.8	2.6	0.0	chr7	139360345	139360382	(19985591)	+	G-rich	Low_complexity	1	39	(0)	3765423
28	0.0	0.0	0.0	chr7	140398737	140398763	(18947210)	+	(T)n	Simple_repeat	1	27	(0)	3767338
23	15.1	0.0	2.2	chr7	140479183	140479228	(18866745)	+	(GCC)n	Simple_repeat	1	46	(0)	3767540
13	21.8	0.0	0.0	chr7	140479268	140479300	(18866673)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	3767541
675	29.3	4.6	1.4	chr7	140479687	140479936	(18866037)	+	MIRb	SINE/MIR	1	261	(7)	3767542
218	31.4	12.5	5.7	chr7	140641383	140641679	(18704294)	C	L2b	LINE/L2	(84)	3291	2972	3767938
470	29.8	8.7	2.7	chr7	143322821	143323224	(16022749)	+	L2a	LINE/L2	2887	3333	(42)	3771758
12	22.5	2.3	2.3	chr7	143408762	143408804	(15937169)	+	(AGCACC)n	Simple_repeat	1	44	(0)	3771874
14	0.0	10.0	3.0	chr7	143408873	143408902	(15937071)	+	(CGGG)n	Simple_repeat	1	33	(0)	3771875
18	11.0	4.2	1.4	chr7	143408903	143408919	(15937054)	+	G-rich	Low_complexity	3	50	(0)	3771876
12	30.7	3.5	0.0	chr7	143409076	143409132	(15936841)	+	(TCCTAA)n	Simple_repeat	1	59	(0)	3771877
17388	10.8	4.6	4.2	chr7	145081823	145083695	(14262278)	C	L1PB1	LINE/L1	(5003)	1860	3	3774145
4763	14.9	3.0	2.3	chr7	148611173	148611970	(10734003)	+	LTR1B1	LTR/ERV1	15	818	(0)	3779091
12	21.6	5.6	5.3	chr7	149262051	149262121	(10083852)	+	(GCCGCGG)n	Simple_repeat	1	75	(0)	3780412
192	23.7	0.0	0.0	chr7	149284868	149284905	(10061068)	+	MIR3	SINE/MIR	116	153	(55)	3780453
531	29.9	6.6	3.2	chr7	149874463	149874652	(9471321)	+	MIRb	SINE/MIR	72	268	(0)	3781259
15	22.1	3.2	4.6	chr7	151013525	151013587	(8332386)	+	(TGCCCC)n	Simple_repeat	1	65	(0)	3782787
13	20.3	6.7	0.0	chr7	151020442	151020486	(8325487)	+	(CTCTC)n	Simple_repeat	1	48	(0)	3782793
46	52.2	0.4	0.2	chr7	151669720	151670199	(7675774)	+	(CACACA)n	Simple_repeat	1	482	(0)	3783872
2231	8.8	0.0	0.0	chr7	152020393	152020665	(7325308)	C	AluSc	SINE/Alu	(36)	273	1	3784442
16	27.8	1.8	0.0	chr7	156640631	156640686	(2705287)	+	G-rich	Low_complexity	1	57	(0)	3791165
21	21.2	0.0	4.6	chr7	156893190	156893254	(2452719)	+	G-rich	Low_complexity	1	65	(0)	3791500
13	26.4	1.9	1.9	chr7	156893315	156893366	(2452607)	+	G-rich	Low_complexity	1	53	(0)	3791500
385	8.9	0.2	0.0	chr7	158395285	158395820	(950153)	+	(GAGGGGC)n	Simple_repeat	1	537	(0)	3793216
12	17.6	4.5	4.3	chr7	158705144	158705187	(640786)	+	GA-rich	Low_complexity	1	46	(0)	3793569
468	17.7	13.3	0.8	chr7	158705505	158705635	(640338)	C	Charlie2b	DNA/hAT-Charlie	(800)	1982	1833	3793570
12	25.5	0.0	6.9	chr7	158829566	158829623	(516350)	+	G-rich	Low_complexity	1	58	(0)	3793757
3549	23.1	12.3	2.8	chr8	320449	322255	(144816381)	C	L1M4b	LINE/L1	(4859)	2008	12	3794697
735	21.7	0.8	0.3	chr8	350184	351729	(144786907)	+	(TAGG)n	Simple_repeat	1	1559	(0)	3794731
18	4.0	0.0	3.6	chr8	544659	544686	(144593950)	+	(GGC)n	Simple_repeat	1	28	(0)	3794932
3152	15.2	5.2	1.6	chr8	1657829	1658390	(143480246)	C	LTR9C	LTR/ERV1	(0)	666	84	3795932
442	3.2	1.6	1.6	chr8	1658391	1658454	(143480182)	C	L1PA7	LINE/L1	(4)	6150	6087	3795933
119	9.5	5.6	8.2	chr8	1763325	1763682	(143374954)	+	(GCCC)n	Simple_repeat	1	378	(0)	3796064
16	21.8	0.0	0.0	chr8	1763735	1763772	(143374864)	+	(CGCG)n	Simple_repeat	1	38	(0)	3796065
231	26.2	1.5	1.5	chr8	8317062	8317127	(136821509)	+	MIR3	SINE/MIR	16	81	(127)	3804515
330	22.2	2.9	6.6	chr8	8317172	8317277	(136821359)	+	LTR33	LTR/ERVL	47	148	(367)	3804516
226	19.5	0.0	0.0	chr8	8594402	8594442	(136544194)	+	MER94	DNA/hAT-Blackjack	5	45	(89)	3804986
1961	18.8	0.7	1.9	chr8	9041379	9041739	(136096897)	+	L1M2	LINE/L1	2679	3042	(3101)	3805806
13	18.9	2.8	0.0	chr8	9903838	9903873	(135234763)	+	(CTCCC)n	Simple_repeat	1	37	(0)	3807239
528	24.4	3.0	0.0	chr8	10055281	10055411	(135083225)	C	MER5C1	DNA/hAT-Charlie	(50)	213	79	3807510
594	20.6	15.3	2.4	chr8	10055468	10055631	(135083005)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	3807511
319	33.0	14.0	2.5	chr8	10335799	10335994	(134802642)	C	MIRc	SINE/MIR	(37)	231	10	3807904
19	12.4	0.0	0.0	chr8	10602594	10602628	(134536008)	+	(GTGTGC)n	Simple_repeat	1	35	(0)	3808327
239	21.7	9.1	0.0	chr8	10602747	10602806	(134535830)	+	MER5A1	DNA/hAT-Charlie	44	109	(57)	3808328
182	29.3	6.5	0.0	chr8	10840184	10840241	(134298395)	C	L2c	LINE/L2	(69)	3318	3257	3808687
26	3.4	4.2	8.0	chr8	10960213	10960284	(134178352)	+	(GCAGGTATA)n	Simple_repeat	1	75	(0)	3808832
718	27.2	2.0	0.5	chr8	11158960	11159155	(133979481)	+	MIR	SINE/MIR	2	200	(62)	3809177
714	23.3	3.5	0.0	chr8	11159544	11159706	(133978930)	+	MER5A	DNA/hAT-Charlie	21	189	(0)	3809178
15	15.4	2.8	0.0	chr8	11440405	11440440	(133698196)	+	(TGAGAGC)n	Simple_repeat	1	37	(0)	3809592
805	28.4	8.8	5.9	chr8	11644558	11644998	(133493638)	+	LTR16B2	LTR/ERVL	5	459	(3)	3809931
13	11.2	4.5	6.5	chr8	11942482	11942525	(133196111)	+	G-rich	Low_complexity	1	46	(0)	3810421
17	15.0	0.0	2.6	chr8	12951706	12951744	(132186892)	+	G-rich	Low_complexity	1	39	(0)	3811881
654	29.1	5.2	9.7	chr8	14404718	14405245	(130733391)	+	LTR33A	LTR/ERVL	4	506	(14)	3813971
13	15.8	2.7	2.6	chr8	17246506	17246542	(127892094)	+	(CCCCCAG)n	Simple_repeat	1	38	(0)	3817917
18	14.0	2.4	2.4	chr8	17413210	17413250	(127725386)	+	(CCT)n	Simple_repeat	1	42	(0)	3818144
17	10.0	3.1	0.0	chr8	17923983	17924014	(127214622)	+	(GTTTT)n	Simple_repeat	1	33	(0)	3818943
1117	28.2	9.8	4.6	chr8	18989937	18990494	(126148142)	+	L2b	LINE/L2	2507	3114	(261)	3820465
405	20.0	7.1	0.0	chr8	18990495	18990599	(126148037)	+	MLT1K	LTR/ERVL-MaLR	7	119	(476)	3820466
2063	15.9	0.3	1.0	chr8	19352725	19353019	(125785617)	+	AluJb	SINE/Alu	1	293	(19)	3821083
16	9.9	0.0	5.6	chr8	19817790	19817825	(125320811)	+	(CTCCC)n	Simple_repeat	1	36	(0)	3821836
13	16.2	10.4	0.0	chr8	19817826	19817873	(125320763)	+	(TACACCT)n	Simple_repeat	1	53	(0)	3821837
42	4.1	0.0	1.9	chr8	20303978	20304029	(124834607)	+	(CGGGG)n	Simple_repeat	1	52	(0)	3822604
360	29.6	14.6	2.8	chr8	20358170	20358350	(124780286)	+	MIRc	SINE/MIR	11	216	(52)	3822709
700	14.4	4.8	0.0	chr8	20358638	20358755	(124779881)	+	MLT1B	LTR/ERVL-MaLR	1	124	(266)	3822710
275	31.9	14.9	3.0	chr8	22110464	22110630	(123028006)	+	MIR	SINE/MIR	1	188	(42)	3825594
28	10.5	0.0	0.0	chr8	22230202	22230242	(122908394)	+	(CA)n	Simple_repeat	1	41	(0)	3825796
14	22.0	2.0	3.9	chr8	22367197	22367247	(122771389)	+	G-rich	Low_complexity	1	52	(0)	3826083
192	20.0	0.0	0.0	chr8	22998829	22998863	(122139773)	C	MIR1_Amn	SINE/MIR	(78)	152	118	3827187
16	23.2	0.0	2.1	chr8	22999141	22999187	(122139449)	+	(CCCCGC)n	Simple_repeat	1	47	(0)	3827188
309	29.2	4.0	1.0	chr8	23458038	23458134	(121680502)	C	MIRb	SINE/MIR	(105)	163	64	3827941
13	31.3	1.2	4.8	chr8	24913303	24913384	(120225252)	+	A-rich	Low_complexity	1	83	(0)	3830164
1919	21.1	6.8	5.4	chr8	27286695	27287214	(117851422)	+	MER74A	LTR/ERVL	1	528	(30)	3834118
15	20.6	6.0	0.0	chr8	27490972	27491021	(117647615)	+	(CCTCTC)n	Simple_repeat	1	53	(0)	3834471
14	25.2	0.0	3.9	chr8	27491089	27491139	(117647497)	+	(GGCAG)n	Simple_repeat	1	51	(0)	3834472
11	25.1	0.0	4.3	chr8	28494136	28494181	(116644455)	+	(GCGTGC)n	Simple_repeat	1	46	(0)	3836284
12	17.6	0.0	0.0	chr8	28890070	28890096	(116248540)	+	(CCTTT)n	Simple_repeat	1	27	(0)	3837024
1046	9.0	0.0	0.0	chr8	30744604	30744736	(114393900)	C	FLAM_C	SINE/Alu	(10)	133	1	3840346
16	18.0	0.0	2.5	chr8	32548904	32548943	(112589693)	+	(CCTCCC)n	Simple_repeat	1	40	(0)	3843152
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
765	17.9	2.7	1.7	chr8	33514030	33514265	(111624371)	C	L1PA16	LINE/L1	(8)	6158	5874	3844638
33	0.0	0.0	0.0	chr8	33597883	33597910	(111540726)	+	(AC)n	Simple_repeat	1	28	(0)	3844859
13	12.7	0.0	0.0	chr8	38231750	38231775	(106906861)	+	(CCGCC)n	Simple_repeat	1	26	(0)	3851937
13	26.1	0.0	0.0	chr8	41307039	41307079	(103831557)	+	G-rich	Low_complexity	1	41	(0)	3856773
1171	23.6	13.8	0.5	chr8	49345990	49346377	(95792259)	+	LTR40b	LTR/ERVL	3	450	(12)	3864331
187	29.3	3.5	0.0	chr8	52941005	52941086	(92197550)	+	MER5A	DNA/hAT-Charlie	74	158	(31)	3868909
1545	24.8	7.7	7.0	chr8	55194836	55195763	(89942873)	+	Charlie2b	DNA/hAT-Charlie	1802	2736	(46)	3872088
239	34.3	2.1	6.2	chr8	55195808	55195953	(89942683)	+	MER5B	DNA/hAT-Charlie	4	143	(35)	3872089
467	28.3	10.7	2.1	chr8	55772631	55772818	(89365818)	C	MIRb	SINE/MIR	(61)	207	2	3872867
295	25.8	16.4	0.3	chr8	56619460	56619592	(88519044)	+	MIRb	SINE/MIR	83	240	(28)	3874191
184	34.9	4.2	5.0	chr8	60653539	60653921	(84484715)	+	L2	LINE/L2	2702	3081	(338)	3879550
18	14.2	1.9	5.7	chr8	62248923	62248974	(82889662)	+	(CGCGAGC)n	Simple_repeat	1	53	(0)	3881653
12	13.2	5.7	2.7	chr8	62248959	62248993	(82889643)	+	(GCCGG)n	Simple_repeat	1	37	(0)	3881654
2115	6.5	2.5	0.0	chr8	67967807	67968084	(77170552)	+	L1PA5	LINE/L1	5868	6152	(2)	3890089
12	14.1	7.5	0.0	chr8	69834053	69834086	(75304550)	+	(GCGTGC)n	Simple_repeat	1	36	(0)	3892658
50	0.0	0.0	0.0	chr8	69834087	69834129	(75304507)	+	(CA)n	Simple_repeat	1	43	(0)	3892659
32	7.9	0.0	0.0	chr8	70401089	70401129	(74737507)	+	(AC)n	Simple_repeat	1	41	(0)	3893732
28	0.0	0.0	0.0	chr8	70668749	70668775	(74469861)	+	(T)n	Simple_repeat	1	27	(0)	3894217
12086	14.3	1.0	0.9	chr8	70804981	70808319	(74330317)	+	L1PA10	LINE/L1	4	3355	(3106)	3894380
229	33.7	8.9	0.0	chr8	71484533	71484624	(73654012)	+	MER45C	DNA/hAT-Tip100	531	631	(322)	3895264
331	18.2	0.0	0.0	chr8	71484622	71484676	(73653960)	+	MER45B	DNA/hAT-Tip100	986	1040	(0)	3895265
27	29.3	0.0	5.7	chr8	74321412	74321535	(70817101)	+	(CGC)n	Simple_repeat	1	124	(0)	3899515
26	16.0	2.0	0.0	chr8	76682669	76682717	(68455919)	+	(GT)n	Simple_repeat	1	50	(0)	3902549
229	34.4	3.0	2.3	chr8	76993220	76993350	(68145286)	C	L2a	LINE/L2	(577)	2842	2711	3902920
2415	9.3	0.3	0.3	chr8	81721523	81721834	(63416802)	+	AluSp	SINE/Alu	2	313	(0)	3909683
18	0.0	0.0	0.0	chr8	84182855	84182877	(60955759)	+	(AAAC)n	Simple_repeat	1	23	(0)	3912801
25	19.4	5.6	0.0	chr8	84183092	84183162	(60955474)	+	(GCGGCA)n	Simple_repeat	1	75	(0)	3912802
18	16.0	0.0	0.0	chr8	85107298	85107332	(60031304)	+	(GGC)n	Simple_repeat	1	35	(0)	3914051
413	27.6	3.0	3.9	chr8	85297649	85297750	(59840886)	C	LTR88b	LTR/Gypsy?	(85)	752	652	3914366
665	24.8	13.7	1.5	chr8	91662199	91662403	(53476233)	+	MIR	SINE/MIR	13	246	(16)	3922809
17	21.4	3.9	5.0	chr8	92103352	92103428	(53035208)	+	(GCGCCGC)n	Simple_repeat	1	80	(0)	3923414
12	9.8	0.0	0.0	chr8	92103580	92103601	(53035035)	+	(GGGC)n	Simple_repeat	1	22	(0)	3923415
659	29.6	4.7	8.8	chr8	93156406	93156531	(51982105)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	381	3924775
2729	9.9	8.0	0.5	chr8	93156532	93156927	(51981709)	+	MER61C	LTR/ERV1	1	428	(0)	3924776
16	17.5	3.5	5.1	chr8	94640762	94640818	(50497818)	+	(CCCCCT)n	Simple_repeat	1	59	(0)	3927280
282	33.0	1.8	5.9	chr8	96235753	96235871	(48902765)	+	MIRb	SINE/MIR	13	126	(142)	3929960
424	26.0	16.2	0.7	chr8	96520970	96521139	(48617497)	C	MIR3	SINE/MIR	(8)	200	1	3930446
1580	27.7	11.3	2.5	chr8	99550435	99552285	(45586351)	C	L1MEd	LINE/L1	(2785)	3536	981	3935361
17	8.9	0.0	0.0	chr8	99552567	99552590	(45586046)	+	(T)n	Simple_repeat	1	24	(0)	3935362
15	9.7	0.0	0.0	chr8	100150590	100150611	(44988025)	+	(AG)n	Simple_repeat	1	22	(0)	3936243
13	24.0	0.0	2.4	chr8	100953004	100953044	(44185592)	+	(GCCGG)n	Simple_repeat	1	41	(0)	3937837
239	30.8	3.6	1.8	chr8	101125943	101126051	(44012585)	+	MER5A	DNA/hAT-Charlie	50	160	(29)	3938200
302	12.5	0.0	0.0	chr8	101265985	101266032	(43872604)	C	L1PA7	LINE/L1	(1)	6153	6106	3938446
12	19.3	0.0	10.3	chr8	102239559	102239616	(42899020)	+	(CCTCC)n	Simple_repeat	1	58	(0)	3940006
18	16.9	0.0	0.0	chr8	102239873	102239905	(42898731)	+	(GT)n	Simple_repeat	1	33	(0)	3940007
13	21.2	2.1	4.2	chr8	102655686	102655732	(42482904)	+	(CGC)n	Simple_repeat	1	48	(0)	3940827
11	24.1	0.0	0.0	chr8	102655765	102655798	(42482838)	+	G-rich	Low_complexity	1	34	(0)	3940828
11	14.9	4.9	4.7	chr8	106658135	106658175	(38480461)	+	(GCCGGCCC)n	Simple_repeat	1	43	(0)	3946883
16	15.2	0.0	5.0	chr8	109644662	109644701	(35493935)	+	(CGC)n	Simple_repeat	1	40	(0)	3951138
14	9.6	0.0	0.0	chr8	109644792	109644814	(35493822)	+	(CGC)n	Simple_repeat	1	23	(0)	3951139
59	23.6	4.5	2.9	chr8	110559525	110559648	(34578988)	+	(TA)n	Simple_repeat	1	126	(0)	3952349
3233	18.9	5.6	11.0	chr8	110559649	110560515	(34578121)	C	LTR1B1	LTR/ERV1	(0)	818	1	3952350
35	0.0	0.0	0.0	chr8	113438505	113438534	(31700102)	+	(GT)n	Simple_repeat	1	30	(0)	3956152
19	11.6	0.0	0.0	chr8	118622163	118622190	(26516446)	+	(G)n	Simple_repeat	1	28	(0)	3963593
37	19.9	2.3	6.1	chr8	119208358	119208486	(25930150)	+	(GCG)n	Simple_repeat	1	132	(0)	3964522
271	31.2	7.4	0.8	chr8	120124362	120124487	(25014149)	+	MER5A	DNA/hAT-Charlie	1	135	(54)	3966125
205	28.6	4.5	0.0	chr8	120124534	120124596	(25014040)	+	MER5A	DNA/hAT-Charlie	124	189	(0)	3966126
249	22.6	17.6	1.2	chr8	122822525	122822609	(22316027)	C	L2c	LINE/L2	(231)	3156	3055	3970608
680	2.7	0.0	0.0	chr8	123157229	123157302	(21981334)	C	tRNA-Met_	tRNA	(2)	74	1	3971276
19	15.8	1.8	5.4	chr8	124372641	124372695	(20765941)	+	(GCAGCC)n	Simple_repeat	1	56	(0)	3973579
224	27.9	1.1	6.1	chr8	124997846	124997944	(20140692)	+	L2c	LINE/L2	3061	3154	(221)	3974744
325	25.3	0.0	2.2	chr8	124997965	124998053	(20140583)	+	L2c	LINE/L2	3300	3386	(1)	3974744
12	17.6	0.0	0.0	chr8	126556375	126556401	(18582235)	+	GA-rich	Low_complexity	1	27	(0)	3977736
12	17.4	0.0	5.6	chr8	126557969	126558004	(18580632)	+	(CCGC)n	Simple_repeat	1	36	(0)	3977738
326	26.0	5.4	4.7	chr8	127950818	127950898	(17187738)	C	MIRc	SINE/MIR	(27)	241	155	3980466
380	26.3	2.1	0.0	chr8	129682309	129682403	(15456233)	C	MIR3	SINE/MIR	(44)	164	68	3983597
184	32.5	10.0	2.3	chr8	130275336	130275464	(14863172)	C	LFSINE_Vert	SINE/tRNA	(308)	151	12	3984694
15	21.4	0.0	0.0	chr8	131364161	131364198	(13774438)	+	A-rich	Low_complexity	1	38	(0)	3986720
248	27.6	14.0	2.2	chr8	132964836	132964999	(12173637)	C	L2b	LINE/L2	(180)	3207	3021	3989514
36	2.9	0.0	0.0	chr8	133039954	133039988	(12098648)	+	(CA)n	Simple_repeat	1	35	(0)	3989653
608	20.4	10.4	0.7	chr8	134364099	134364246	(10774390)	+	MER5A1	DNA/hAT-Charlie	1	164	(2)	3992197
2159	13.0	4.7	2.0	chr8	134364666	134365019	(10773617)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3992198
399	30.7	8.1	11.8	chr8	134605789	134606212	(10532424)	C	L2c	LINE/L2	(38)	3349	2919	3992561
16	4.5	0.0	0.0	chr8	134832489	134832511	(10306125)	+	(CACG)n	Simple_repeat	1	23	(0)	3992946
346	24.1	6.1	10.7	chr8	140464199	140464319	(4674317)	+	L2b	LINE/L2	3260	3374	(1)	4002004
1401	23.6	2.6	6.9	chr8	140646852	140647298	(4491338)	+	L1ME2z	LINE/L1	4598	5024	(1122)	4002334
328	10.7	14.8	0.0	chr8	141388316	141388390	(3750246)	C	LTR16E1	LTR/ERVL	(13)	525	438	4003578
536	21.3	6.4	0.0	chr8	142098223	142098386	(3040250)	+	L1ME1	LINE/L1	5991	6168	(11)	4004524
222	33.3	3.6	0.0	chr8	142101835	142101915	(3036721)	+	MIRb	SINE/MIR	41	124	(144)	4004526
15	31.1	0.0	1.6	chr8	142727285	142727345	(2411291)	+	(CGCCGC)n	Simple_repeat	1	61	(0)	4005232
12	27.2	2.0	2.0	chr8	143541484	143541533	(1597103)	+	(GCGGA)n	Simple_repeat	1	51	(0)	4006298
14	31.9	3.9	0.0	chr8	143733516	143733592	(1405044)	+	(GCCCC)n	Simple_repeat	1	80	(0)	4006585
15	7.8	0.0	3.5	chr8	143733637	143733665	(1404971)	+	(CGCCC)n	Simple_repeat	1	29	(0)	4006586
13	22.5	0.0	7.4	chr8	143878550	143878603	(1260033)	+	G-rich	Low_complexity	1	54	(0)	4006793
13	30.2	0.0	0.0	chr8	144467711	144467755	(670881)	+	(CAG)n	Simple_repeat	1	45	(0)	4007646
20	12.3	1.6	9.2	chr8	144524888	144524951	(613685)	+	(GCAGCG)n	Simple_repeat	1	65	(0)	4007705
1998	17.0	0.0	0.0	chr8	144757514	144757819	(380817)	C	AluSq2	SINE/Alu	(7)	306	1	4008048
1283	23.2	16.5	4.7	chr8	144757820	144758215	(380421)	C	LTR75B	LTR/ERVL	(121)	487	2	4008047
821	10.5	19.3	0.7	chr8	145003627	145003769	(134867)	C	AluJb	SINE/Alu	(18)	294	119	4008415
36	20.4	2.8	3.6	chr9	977289	977396	(137417321)	+	(GCC)n	Simple_repeat	1	111	(0)	4010080
14	21.1	3.3	4.8	chr9	4662147	4662206	(133732511)	+	(TCACC)n	Simple_repeat	1	62	(0)	4015435
12	13.7	0.0	0.0	chr9	4662430	4662453	(133732264)	+	(AGC)n	Simple_repeat	1	24	(0)	4015436
2237	12.2	1.0	0.3	chr9	6015880	6016173	(132378544)	C	AluJb	SINE/Alu	(16)	296	1	4017406
21122	11.2	1.4	1.5	chr9	7879593	7886073	(130508644)	+	L1PA8	LINE/L1	4	6484	(3)	4020350
2922	15.2	5.6	0.3	chr9	9078965	9079604	(129315113)	C	L1MA5A	LINE/L1	(46)	6251	5548	4021997
14	4.9	0.0	0.0	chr9	14692899	14692919	(123701798)	+	(AAAT)n	Simple_repeat	1	21	(0)	4029303
26	15.8	0.0	0.0	chr9	14693150	14693199	(123701518)	+	G-rich	Low_complexity	1	50	(0)	4029304
12	18.5	11.1	1.4	chr9	14693201	14693263	(123701454)	+	(CGCT)n	Simple_repeat	1	70	(0)	4029305
336	27.7	1.7	8.7	chr9	16154644	16154896	(122239821)	C	UCON51	LTR?	(14)	236	2	4031534
1530	15.1	8.3	0.7	chr9	33290031	33290308	(105104409)	+	AluJr	SINE/Alu	2	302	(10)	4055139
800	27.3	0.4	10.7	chr9	34475541	34475811	(103918906)	C	MIRb	SINE/MIR	(12)	256	14	4057512
13	18.8	0.0	5.0	chr9	35616917	35616956	(102777761)	+	GA-rich	Low_complexity	1	40	(0)	4059164
44	0.0	0.0	0.0	chr9	35647668	35647705	(102747012)	+	(GA)n	Simple_repeat	1	38	(0)	4059224
432	28.9	12.8	4.8	chr9	35647849	35648332	(102746385)	+	L2b	LINE/L2	2629	3153	(222)	4059225
16	14.2	0.0	0.0	chr9	35665364	35665394	(102729323)	+	(GCAGG)n	Simple_repeat	1	31	(0)	4059258
191	29.9	2.5	11.5	chr9	35790330	35790416	(102604301)	+	L2c	LINE/L2	3292	3370	(17)	4059443
15	7.0	6.7	0.0	chr9	35815602	35815631	(102579086)	+	(GTTT)n	Simple_repeat	1	32	(0)	4059468
440	23.2	2.9	2.9	chr9	36190486	36190587	(102204130)	C	MIRc	SINE/MIR	(69)	199	98	4060131
369	26.9	2.9	5.0	chr9	37485575	37485715	(100909002)	+	MER115	DNA/hAT-Tip100	450	587	(106)	4062763
13	14.7	7.9	0.0	chr9	37904198	37904235	(100490482)	+	(GCCCGCG)n	Simple_repeat	1	41	(0)	4063617
12	18.1	0.0	3.0	chr9	66900955	66900987	(71493730)	+	(CCCAGG)n	Simple_repeat	1	33	(0)	4078011
180	30.2	0.0	0.0	chr9	66901101	66901153	(71493564)	+	MIR	SINE/MIR	173	225	(37)	4078012
203	29.7	18.7	1.2	chr9	66901219	66901385	(71493332)	C	MIRb	SINE/MIR	(63)	205	3	4078013
211	21.9	0.0	4.5	chr9	74825686	74825752	(63568965)	C	L2a	LINE/L2	(62)	3364	3301	4090006
1851	15.2	5.5	3.0	chr9	75878407	75878511	(62516206)	C	Tigger3a	DNA/TcMar-Tigger	(239)	109	2	4091602
14	21.8	0.0	0.0	chr9	75878623	75878656	(62516061)	+	(GATG)n	Simple_repeat	1	34	(0)	4091606
579	27.2	8.5	1.5	chr9	75878842	75879170	(62515547)	+	L1ME4c	LINE/L1	392	745	(85)	4091607
13	21.1	0.0	6.1	chr9	76394000	76394048	(62000669)	+	(CCCCGCT)n	Simple_repeat	1	49	(0)	4092454
227	22.2	0.0	0.0	chr9	77713888	77713932	(60680785)	+	MER63A	DNA/hAT-Blackjack	36	80	(130)	4094693
2393	7.7	0.0	2.6	chr9	78235587	78235899	(60158818)	C	AluSq2	SINE/Alu	(8)	305	1	4095457
218	32.3	12.4	5.0	chr9	79026448	79026789	(59367928)	C	L2	LINE/L2	(339)	3080	2710	4096613
483	29.5	2.8	0.6	chr9	81379754	81379927	(57014790)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	4099812
13	9.7	9.1	0.0	chr9	83708270	83708302	(54686415)	+	(TGCGCGC)n	Simple_repeat	1	36	(0)	4103352
36	0.0	0.0	0.0	chr9	84170767	84170797	(54223920)	+	(TG)n	Simple_repeat	1	31	(0)	4104184
814	26.6	10.7	4.8	chr9	85523143	85523643	(52871074)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	1	4106322
20	14.3	2.0	3.9	chr9	86354546	86354595	(52040122)	+	(CGCCC)n	Simple_repeat	1	51	(0)	4107753
2439	8.4	0.0	0.6	chr9	87975047	87975357	(50419360)	+	AluSx3	SINE/Alu	1	309	(2)	4110238
17	12.0	2.6	2.6	chr9	88388281	88388318	(50006399)	+	(GCCCC)n	Simple_repeat	1	39	(0)	4111077
13	22.6	2.4	0.0	chr9	89604346	89604386	(48790331)	+	(CCCCG)n	Simple_repeat	1	42	(0)	4112729
297	28.3	9.3	2.4	chr9	89685915	89686084	(48708633)	+	MamGypLTR1c	LTR/Gypsy	592	774	(29)	4112813
381	23.5	11.2	1.2	chr9	89792083	89792250	(48602467)	+	MER5A	DNA/hAT-Charlie	1	187	(2)	4112976
99	24.1	3.6	3.2	chr9	89922569	89922897	(48471820)	+	(AC)n	Simple_repeat	1	341	(0)	4113146
337	25.8	7.5	2.4	chr9	90102703	90102829	(48291888)	C	MER5B	DNA/hAT-Charlie	(4)	174	41	4113402
16	17.3	8.3	1.5	chr9	91899554	91899613	(46495104)	+	(AGCTGAGC)n	Simple_repeat	1	65	(0)	4115891
37	33.8	2.7	3.6	chr9	91899710	91899928	(46494789)	+	(AC)n	Simple_repeat	1	225	(0)	4115892
302	37.3	3.2	0.0	chr9	93826062	93826273	(44568444)	C	MIR	SINE/MIR	(27)	235	17	4118617
39	20.3	7.3	0.0	chr9	95004694	95004817	(43389900)	+	G-rich	Low_complexity	1	133	(0)	4120620
3498	19.9	8.0	9.9	chr9	95313470	95314308	(43080409)	+	L1M4	LINE/L1	3483	4355	(1791)	4121014
21	16.2	2.8	6.8	chr9	96417538	96417608	(41977109)	+	(CCGC)n	Simple_repeat	1	73	(0)	4122831
24	28.0	2.5	5.6	chr9	97803181	97803291	(40591426)	+	A-rich	Low_complexity	10	118	(0)	4125169
50	23.0	3.8	5.9	chr9	97803191	97803463	(40591254)	+	GA-rich	Low_complexity	1	267	(0)	4125170
15	13.7	0.0	2.9	chr9	97803548	97803581	(40591136)	+	(CCGCCC)n	Simple_repeat	1	34	(0)	4125171
329	23.6	12.4	5.1	chr9	97978486	97978641	(40416076)	+	L1ME4a	LINE/L1	5955	6123	(1)	4125538
32	26.8	1.8	1.8	chr9	97983153	97983272	(40411445)	+	(CGCCG)n	Simple_repeat	1	120	(0)	4125544
16	19.6	2.0	3.9	chr9	97983395	97983444	(40411273)	+	(CCGC)n	Simple_repeat	1	51	(0)	4125545
245	25.4	12.4	2.1	chr9	98192315	98192467	(40202250)	C	MIR3	SINE/MIR	(76)	192	17	4126033
13	18.9	0.0	0.0	chr9	98192569	98192598	(40202119)	+	(GCG)n	Simple_repeat	1	30	(0)	4126034
13	19.2	3.8	5.5	chr9	98192622	98192674	(40202043)	+	(CGC)n	Simple_repeat	1	55	(0)	4126035
12	7.2	10.3	0.0	chr9	98192676	98192704	(40202013)	+	(GGCGG)n	Simple_repeat	1	32	(0)	4126036
13	12.1	0.0	3.5	chr9	98255746	98255774	(40138943)	+	(GCCAC)n	Simple_repeat	1	29	(0)	4126182
389	29.7	2.1	5.5	chr9	98317426	98317571	(40077146)	+	MIR3	SINE/MIR	5	145	(63)	4126292
893	26.8	13.4	7.3	chr9	98445463	98445888	(39948829)	C	LTR16A1	LTR/ERVL	(0)	456	1	4126532
293	27.3	2.9	0.0	chr9	99172990	99173088	(39221629)	C	LTR85a	LTR/Gypsy?	(10)	692	591	4127955
201	21.0	16.2	0.0	chr9	99906272	99906333	(38488384)	+	MIRc	SINE/MIR	96	169	(99)	4129280
29	0.0	0.0	0.0	chr9	99906589	99906615	(38488102)	+	(GGGGCG)n	Simple_repeat	1	27	(0)	4129281
16	19.1	0.0	4.3	chr9	100098878	100098923	(38295794)	+	(GGCTG)n	Simple_repeat	1	46	(0)	4129547
30	23.5	0.0	0.0	chr9	101028886	101028950	(37365767)	+	(CA)n	Simple_repeat	1	65	(0)	4131062
156	10.7	3.8	5.8	chr9	101448749	101449113	(36945604)	+	GA-rich	Low_complexity	1	379	(0)	4131715
13	16.8	0.0	0.0	chr9	101449113	101449140	(36945577)	+	(AGGC)n	Simple_repeat	1	28	(0)	4131716
575	25.1	11.1	12.0	chr9	101478519	101478917	(36915800)	+	MLT1J2	LTR/ERVL-MaLR	45	439	(9)	4131761
3493	24.7	5.3	6.9	chr9	103532675	103533956	(34860761)	+	L1PA14	LINE/L1	15	1445	(5248)	4134491
15	11.7	0.0	0.0	chr9	104747886	104747913	(33646804)	+	(GAGGG)n	Simple_repeat	1	28	(0)	4136198
11	18.9	0.0	7.1	chr9	105064690	105064731	(33329986)	+	(GCCAGCT)n	Simple_repeat	1	42	(0)	4136809
646	9.0	0.0	0.0	chr9	105558488	105558565	(32836152)	C	AluSx	SINE/Alu	(234)	78	1	4137705
18	14.7	0.0	0.0	chr9	106415053	106415082	(31979635)	+	(GA)n	Simple_repeat	1	30	(0)	4138958
14	24.5	2.3	0.0	chr9	107487983	107488025	(30906692)	+	(CGA)n	Simple_repeat	1	44	(0)	4140833
3385	17.3	0.8	2.0	chr9	109224070	109224681	(29170036)	+	L1MB7	LINE/L1	5521	6125	(59)	4144054
287	22.4	0.0	1.5	chr9	109224709	109224776	(29169941)	+	MER5B	DNA/hAT-Charlie	32	98	(80)	4144055
192	16.1	0.0	0.0	chr9	109224786	109224816	(29169901)	+	MER5B	DNA/hAT-Charlie	148	178	(0)	4144056
252	25.8	7.0	4.8	chr9	109224823	109224948	(29169769)	C	MIR3	SINE/MIR	(51)	157	29	4144057
235	34.1	3.5	3.5	chr9	109225069	109225211	(29169506)	+	L2a	LINE/L2	3279	3421	(5)	4144058
36	0.0	0.0	0.0	chr9	109318151	109318181	(29076536)	+	(GT)n	Simple_repeat	1	31	(0)	4144246
32	3.0	0.0	0.0	chr9	109321009	109321042	(29073675)	+	(GCC)n	Simple_repeat	1	34	(0)	4144250
238	20.0	0.0	18.5	chr9	109321319	109321410	(29073307)	+	MIR3	SINE/MIR	124	198	(10)	4144251
20	20.0	1.4	5.6	chr9	112718283	112718352	(25676365)	+	G-rich	Low_complexity	1	71	(0)	4150361
219	30.9	15.9	4.0	chr9	112784592	112784790	(25609927)	C	MIRc	SINE/MIR	(12)	256	30	4150517
16	30.6	0.0	5.8	chr9	113377041	113377126	(25017591)	+	(CCCGC)n	Simple_repeat	1	86	(0)	4151546
548	29.0	10.4	8.0	chr9	114015258	114015886	(24378831)	+	L1ME4a	LINE/L1	5508	6153	(225)	4152810
2354	18.2	3.4	3.4	chr9	117353764	117354240	(21040477)	+	L1MC1	LINE/L1	5857	6333	(0)	4159295
249	31.5	12.2	1.9	chr9	117354283	117354547	(21040170)	+	L2c	LINE/L2	2910	3205	(182)	4159296
256	29.4	4.4	2.5	chr9	117400157	117400272	(20994445)	C	MIR3	SINE/MIR	(101)	129	16	4159386
9232	7.3	13.7	0.1	chr9	118808417	118809779	(19584938)	C	LTR12C	LTR/ERV1	(0)	1579	3	4161812
329	25.8	3.6	11.1	chr9	121075562	121075700	(17319017)	+	MIRb	SINE/MIR	11	143	(125)	4166302
12	25.6	0.0	0.0	chr9	121822327	121822363	(16572354)	+	(TGTCAGA)n	Simple_repeat	1	37	(0)	4167750
417	31.4	1.1	2.8	chr9	121823014	121823194	(16571523)	C	MIRb	SINE/MIR	(2)	266	83	4167751
276	30.4	2.9	0.0	chr9	122015620	122015721	(16378996)	C	MamRep605	LTR?	(32)	817	713	4168141
1177	29.3	9.8	2.8	chr9	126218805	126219801	(12174916)	+	L2	LINE/L2	1929	3002	(417)	4176066
20	9.1	0.0	5.1	chr9	126558055	126558119	(11836598)	+	(ACC)n	Simple_repeat	1	61	(0)	4176578
324	35.5	6.2	3.2	chr9	126558300	126558512	(11836205)	C	L2a	LINE/L2	(8)	3379	3182	4176579
490	33.2	5.1	4.2	chr9	126690122	126690454	(11704263)	C	L2c	LINE/L2	(468)	2951	2616	4176843
520	26.6	14.1	1.5	chr9	127784762	127784983	(10609734)	+	MIRb	SINE/MIR	6	265	(3)	4179011
11	16.5	5.9	0.0	chr9	127785167	127785200	(10609517)	+	(GGAGGC)n	Simple_repeat	1	36	(0)	4179012
31	27.1	1.4	5.6	chr9	127785379	127785520	(10609197)	+	(GGC)n	Simple_repeat	1	144	(0)	4179013
26	21.7	2.4	3.5	chr9	127802798	127802882	(10591835)	+	(GGCGG)n	Simple_repeat	1	87	(0)	4179046
354	28.7	6.9	0.7	chr9	128845045	128845227	(9549490)	C	MIRb	SINE/MIR	(56)	212	10	4181468
48	0.0	0.0	0.0	chr9	129485948	129485988	(8908729)	+	(TG)n	Simple_repeat	1	41	(0)	4182945
57	0.0	5.1	0.0	chr9	129607459	129607517	(8787200)	+	(GT)n	Simple_repeat	1	62	(0)	4183238
1230	30.4	5.6	1.4	chr9	129853054	129853546	(8541171)	C	L1ME4b	LINE/L1	(9)	883	369	4183788
352	30.2	8.1	7.0	chr9	130122475	130122730	(8271987)	+	L2b	LINE/L2	3116	3374	(1)	4184369
1752	12.2	10.0	0.0	chr9	130122741	130123011	(8271706)	+	AluJb	SINE/Alu	1	301	(11)	4184371
649	23.7	13.6	5.0	chr9	130159545	130159744	(8234973)	C	MIRb	SINE/MIR	(47)	221	2	4184434
301	30.0	5.1	0.0	chr9	130159997	130160126	(8234591)	C	MER117	DNA/hAT-Charlie	(31)	166	30	4184435
436	27.6	12.5	3.5	chr9	130333115	130333317	(8061400)	C	L2b	LINE/L2	(15)	3360	3137	4184812
12	19.8	2.3	4.4	chr9	130333652	130333695	(8061022)	+	(CCTCTCC)n	Simple_repeat	1	45	(0)	4184813
300	38.3	5.4	0.0	chr9	130422199	130422391	(7972326)	C	MIR3	SINE/MIR	(2)	206	3	4184985
190	31.8	8.3	0.0	chr9	132183663	132183754	(6210963)	+	MIRc	SINE/MIR	74	172	(90)	4188385
21	24.3	0.0	0.0	chr9	132183828	132183881	(6210836)	+	(TTGG)n	Simple_repeat	1	54	(0)	4188386
14	15.6	0.0	0.0	chr9	132184028	132184056	(6210661)	+	(ATGA)n	Simple_repeat	1	29	(0)	4188387
219	29.3	7.7	0.0	chr9	132241539	132241695	(6153022)	C	L2b	LINE/L2	(271)	3104	2935	4188496
518	31.8	7.3	1.6	chr9	132547190	132547435	(5847282)	+	MIRb	SINE/MIR	4	264	(4)	4189119
602	10.3	4.0	0.0	chr9	133090108	133090204	(5304513)	+	MSTC	LTR/ERVL-MaLR	317	417	(11)	4190045
51	22.3	0.6	5.0	chr9	133356682	133356841	(5037876)	+	G-rich	Low_complexity	1	161	(0)	4190459
18	6.8	3.2	0.0	chr9	133460460	133460490	(4934227)	+	(GGGCGG)n	Simple_repeat	1	32	(0)	4190626
240	22.2	0.0	0.0	chr9	133956066	133956121	(4438596)	+	MIRc	SINE/MIR	82	137	(93)	4191315
228	21.3	10.7	0.0	chr9	134419702	134419776	(3974941)	C	MIRb	SINE/MIR	(122)	146	63	4191998
17	25.5	4.2	2.7	chr9	135217658	135217673	(3177044)	+	(CCTT)n	Simple_repeat	5	74	(0)	4192917
15	17.4	4.3	2.0	chr9	135998144	135998190	(2396527)	+	(GCCCCAG)n	Simple_repeat	1	49	(0)	4193906
21	10.4	0.0	6.4	chr9	136118868	136118914	(2275803)	+	(GCGT)n	Simple_repeat	1	47	(0)	4194047
236	23.7	8.5	1.7	chr9	136400372	136400491	(1994226)	+	MIRb	SINE/MIR	18	146	(122)	4194334
397	28.2	7.1	0.0	chr9	136488609	136488725	(1905992)	+	MIRb	SINE/MIR	50	175	(93)	4194428
841	19.7	0.0	0.0	chr9	136488864	136488995	(1905722)	+	FLAM_C	SINE/Alu	2	133	(10)	4194429
2060	13.0	0.3	0.7	chr9	136489010	136489309	(1905408)	C	AluSx1	SINE/Alu	(13)	299	1	4194430
11	9.9	5.6	5.3	chr9	136695547	136695582	(1699135)	+	G-rich	Low_complexity	1	38	(0)	4194667
293	12.4	1.4	0.0	chr9	136949908	136949983	(1444734)	C	AluJb	SINE/Alu	(52)	81	1	4195039
2201	11.1	1.3	0.0	chr9	137046811	137047108	(1347609)	C	AluSx	SINE/Alu	(9)	303	2	4195149
2209	12.1	0.7	0.0	chr9	137057399	137057705	(1337012)	C	AluSx1	SINE/Alu	(3)	309	1	4195160
275	15.2	1.7	0.0	chr9	137057708	137057766	(1336951)	C	Alu	SINE/Alu	(241)	60	1	4195161
2549	6.4	0.0	1.0	chr9	137067491	137067802	(1326915)	+	AluSz	SINE/Alu	2	310	(2)	4195185
16	25.8	0.0	2.3	chr9	137309250	137309293	(1085424)	+	(GT)n	Simple_repeat	1	44	(0)	4195481
11	18.0	9.1	0.0	chr9	137309558	137309601	(1085116)	+	(GACCCA)n	Simple_repeat	1	48	(0)	4195482
51	0.0	0.0	0.0	chrX	323548	323591	(155717304)	+	(GT)n	Simple_repeat	1	44	(0)	4358411
50	0.0	0.0	0.0	chrX	323681	323723	(155717172)	+	(TG)n	Simple_repeat	1	43	(0)	4358412
22	0.0	0.0	0.0	chrX	323811	323834	(155717061)	+	(GT)n	Simple_repeat	1	24	(0)	4358413
720	17.6	0.0	0.8	chrX	324369	324493	(155716402)	+	AluJo	SINE/Alu	1	124	(188)	4358415
1293	17.6	0.0	0.9	chrX	661385	661594	(155379301)	+	AluJb	SINE/Alu	105	312	(0)	4359104
23	14.5	0.0	0.0	chrX	1094527	1094579	(154946316)	+	(CA)n	Simple_repeat	1	53	(0)	4360109
15	11.7	8.1	0.0	chrX	1094583	1094619	(154946276)	+	(TTGT)n	Simple_repeat	1	40	(0)	4360110
23	7.2	0.0	0.0	chrX	1126650	1126679	(154914216)	+	(CA)n	Simple_repeat	1	30	(0)	4360188
285	21.9	6.4	0.0	chrX	1127085	1127157	(154913738)	+	MLT1D	LTR/ERVL-MaLR	62	139	(366)	4360189
916	28.7	0.7	1.4	chrX	1657358	1657647	(154383248)	+	L1MB5	LINE/L1	5879	6166	(8)	4361487
366	28.7	1.5	0.8	chrX	1807121	1807250	(154233645)	C	MER5B	DNA/hAT-Charlie	(0)	178	48	4361849
390	15.2	1.5	0.0	chrX	1807528	1807606	(154233289)	C	AluY	SINE/Alu	(0)	301	237	4361850
15	19.1	0.0	6.4	chrX	10158677	10158723	(145882172)	+	(GCT)n	Simple_repeat	1	47	(0)	4376028
1022	18.3	1.6	0.0	chrX	12192680	12192865	(143848030)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	4379160
14	3.6	0.0	11.1	chrX	16946558	16946593	(139094302)	+	(GGGCGG)n	Simple_repeat	1	36	(0)	4387049
15	19.0	2.6	0.0	chrX	51803443	51803480	(104237415)	+	(CTCCTAC)n	Simple_repeat	1	39	(0)	4441139
20	11.1	0.0	0.0	chrX	51803628	51803656	(104237239)	+	(T)n	Simple_repeat	1	29	(0)	4441140
13	19.6	0.0	0.0	chrX	56995464	56995493	(99045402)	+	(GGC)n	Simple_repeat	1	30	(0)	4448724
12	15.3	3.5	0.0	chrX	56995842	56995870	(99045025)	+	(CCCT)n	Simple_repeat	1	30	(0)	4448725
18	24.8	4.7	3.3	chrX	70455085	70455115	(85585780)	+	(CCCT)n	Simple_repeat	1	66	(24)	4459703
753	27.7	16.1	4.2	chrX	110045529	110046006	(45994889)	+	MLT1M	LTR/ERVL-MaLR	97	642	(30)	4507828
17	12.0	2.6	2.6	chrX	115968916	115968953	(40071942)	+	A-rich	Low_complexity	1	39	(0)	4516173
12	19.7	0.0	0.0	chrX	129109287	129109315	(26931580)	+	GA-rich	Low_complexity	1	29	(0)	4534243
385	20.1	3.3	0.0	chrX	153763860	153763957	(2276938)	+	MIR	SINE/MIR	40	140	(128)	4570721
217	26.3	1.7	0.0	chrX	153763976	153764032	(2276863)	+	L2b	LINE/L2	3311	3368	(7)	4570722